BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= gi|254780949|ref|YP_003065362.1| tyrosyl-tRNA synthetase
[Candidatus Liberibacter asiaticus str. psy62]
         (418 letters)

Database: nr 
           14,124,377 sequences; 4,842,793,630 total letters

Searching..................................................done


Results from round 1


>gi|254780949|ref|YP_003065362.1| tyrosyl-tRNA synthetase [Candidatus Liberibacter asiaticus str.
           psy62]
 gi|254040626|gb|ACT57422.1| tyrosyl-tRNA synthetase [Candidatus Liberibacter asiaticus str.
           psy62]
          Length = 418

 Score =  867 bits (2241), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 418/418 (100%), Positives = 418/418 (100%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL
Sbjct: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
           FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK
Sbjct: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ
Sbjct: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT
Sbjct: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK
Sbjct: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG
Sbjct: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLCG 418
           FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLCG
Sbjct: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLCG 418


>gi|315122362|ref|YP_004062851.1| tyrosyl-tRNA synthetase [Candidatus Liberibacter solanacearum
           CLso-ZC1]
 gi|313495764|gb|ADR52363.1| tyrosyl-tRNA synthetase [Candidatus Liberibacter solanacearum
           CLso-ZC1]
          Length = 418

 Score =  689 bits (1779), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 332/417 (79%), Positives = 380/417 (91%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  FKSDFL+ILSERGFIHQISNP+ELD LC    +TAYIGYD TASSLH GHLTQLM+L
Sbjct: 1   MSVFKSDFLNILSERGFIHQISNPQELDKLCYNSTITAYIGYDPTASSLHVGHLTQLMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
           FWLQKTGH+PISLMGGGT +IGDPSF  E+RRM+  QEIQ+NI+ IK IFS+FI+YGTGK
Sbjct: 61  FWLQKTGHRPISLMGGGTGMIGDPSFISEARRMIGVQEIQKNIKSIKDIFSAFIRYGTGK 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
            DALMLNN+ WL  IKYID LRE+GS FSVNRMLSF+SVRSRL+REQSLSFLEFNYMILQ
Sbjct: 121 NDALMLNNDAWLSPIKYIDFLREVGSCFSVNRMLSFDSVRSRLQREQSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVEL+KNYDCRLQMGGSDQWGN+ICGI+LG RLKTP+LFALTSPLLTT+SG KMGKT
Sbjct: 181 AYDFVELSKNYDCRLQMGGSDQWGNMICGIELGGRLKTPQLFALTSPLLTTSSGAKMGKT 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
            +GAIWLNKEMTSPY+FWQYWRNIDDADVV+FAKRLTTLP+SEI R+ KLQ KE+NEAKK
Sbjct: 241 AAGAIWLNKEMTSPYDFWQYWRNIDDADVVNFAKRLTTLPISEIHRIEKLQEKELNEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           IIATEITTMVHG+ EAEKAATAAMECFDM+++S++MPTISISK E+++G+G+LTLIVKAG
Sbjct: 301 IIATEITTMVHGKAEAEKAATAAMECFDMNMYSENMPTISISKAEINQGIGILTLIVKAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           FA ST+EARRH++SNAIK+N+++ISNEK  I+L+DFDS G IKLSFGKK HIIC +C
Sbjct: 361 FAVSTSEARRHIQSNAIKVNDNVISNEKAHIELKDFDSAGVIKLSFGKKRHIICQVC 417


>gi|49474204|ref|YP_032246.1| tyrosyl-tRNA synthetase [Bartonella quintana str. Toulouse]
 gi|81647075|sp|Q6FZW4|SYY_BARQU RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|49239708|emb|CAF26084.1| Tyrosyl-tRNA synthetase [Bartonella quintana str. Toulouse]
          Length = 417

 Score =  535 bits (1379), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 249/413 (60%), Positives = 320/413 (77%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M AFKSDFL I+SERGFIHQIS+ + LD L S+ VV+AYIG+D TASSLHAG L Q+M+L
Sbjct: 1   MLAFKSDFLHIMSERGFIHQISDEKGLDALFSKEVVSAYIGFDPTASSLHAGSLLQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            WLQKTGH+PI+LMGGGT +IGDPSF+DE+R ++   +I  NI  IK +F++++ +G  +
Sbjct: 61  HWLQKTGHRPIALMGGGTGLIGDPSFKDEARPLLTQDDIATNIVSIKKVFANYLTFGEKE 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           TDA ++NN  WLC + Y++ LR++G  FS+NRMLSF+SVR RL+RE SLSFLEFNYMILQ
Sbjct: 121 TDACIINNAEWLCKLNYLEFLRDVGKHFSINRMLSFDSVRLRLEREHSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVEL K Y  R+QMGGSDQWGNII GI+LG RL TP+L+A TSPLLTT+SG KMGK+
Sbjct: 181 AYDFVELYKRYGLRMQMGGSDQWGNIINGIELGHRLGTPQLYAFTSPLLTTSSGAKMGKS 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           L+GA+WLN +M SPY FWQYWRN +DADV  F K  TTLPM EI +++ LQG EINEAKK
Sbjct: 241 LNGAVWLNADMLSPYQFWQYWRNTEDADVTRFLKLYTTLPMDEILKLSALQGTEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+ATEIT M+HGR+ A  AA  A + F+     +++PTI I+  ++  G GLL L+V+AG
Sbjct: 301 ILATEITAMLHGRDLANTAAKTARKTFEEKTFGENLPTIEINASDLKTGAGLLALLVQAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            A S +EARRH++   I++N+ II +E   I  +D ++ G IKLSFGKK H++
Sbjct: 361 LAKSNSEARRHIQGGGIRVNDQIIEDETCLILEEDINAQGIIKLSFGKKKHVL 413


>gi|49475630|ref|YP_033671.1| tyrosyl-tRNA synthetase [Bartonella henselae str. Houston-1]
 gi|81647882|sp|Q6G3B6|SYY_BARHE RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|49238437|emb|CAF27665.1| Tyrosyl-tRNA synthetase [Bartonella henselae str. Houston-1]
          Length = 417

 Score =  535 bits (1379), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 247/414 (59%), Positives = 322/414 (77%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M AFKSDFL+I+SERGFIHQIS+ + LD L S+ VV+AYIG+D TASSLHAG L Q+M+L
Sbjct: 1   MLAFKSDFLNIMSERGFIHQISDEKGLDALFSKEVVSAYIGFDPTASSLHAGSLLQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
           +WLQKTGH+PI LMGGGT +IGDPSF+DE+RR++   +I  NI  IK +F+ ++ +G  +
Sbjct: 61  YWLQKTGHRPIVLMGGGTGLIGDPSFKDEARRLLTQDDIAANIADIKKVFARYLTFGERE 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           TD+ ++NN  WLC++ Y++ LR+IG  FSVNRMLSF+SVR RL+RE SLSFLEFNYMILQ
Sbjct: 121 TDSCIVNNAEWLCTLNYLEFLRDIGKHFSVNRMLSFDSVRLRLEREHSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVEL K Y  R+QMGGSDQWGNII GI+LG RL TP+L+ALTSPLLTT+SG KMGK+
Sbjct: 181 AYDFVELYKRYGLRMQMGGSDQWGNIINGIELGHRLGTPQLYALTSPLLTTSSGAKMGKS 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           L+GA+WLN +M SPY FWQYWRN +DADV  F K  T LPM EI +++ LQG EINEAKK
Sbjct: 241 LNGAVWLNADMLSPYQFWQYWRNTEDADVTRFLKLYTPLPMDEILKLSALQGTEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+ATEIT M+HGR+ A   A  A + F+     +++PT  I+ +++  G GLL L+V+AG
Sbjct: 301 ILATEITAMLHGRDLANAVAETARKTFEERTLGENLPTFEINANDLKMGTGLLILLVQAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            + S +EARRH++   +++N+ II +E   I+ +D ++ G IKLSFGKK H++ 
Sbjct: 361 LSKSNSEARRHIQGGGVRVNDHIIEDETHLIREEDINAQGIIKLSFGKKKHVLI 414


>gi|319404228|emb|CBI77821.1| Tyrosyl-tRNA synthetase [Bartonella rochalimae ATCC BAA-1498]
          Length = 417

 Score =  532 bits (1370), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 249/414 (60%), Positives = 320/414 (77%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M AFKS+FL I+SERGFIHQIS+ + LD L  +  VTAYIG+D TASSLHAG L Q+M+L
Sbjct: 1   MYAFKSEFLRIISERGFIHQISDEKGLDDLFLKETVTAYIGFDPTASSLHAGSLLQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            W QKTGH+PI LMGGGT +IGDPSF+DE+RR++   +I +NI  IK IF+S++ +G  K
Sbjct: 61  HWFQKTGHRPIVLMGGGTGLIGDPSFKDEARRLLTHNDIAQNIMSIKKIFTSYLTFGDNK 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           TDA ++NN  WLC++ Y++ LR +G +FSVNRMLSF+SVR RL+RE SLSFLEFNYMILQ
Sbjct: 121 TDACIVNNAEWLCNLSYLEFLRNVGKYFSVNRMLSFDSVRLRLEREHSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVEL K Y  R+QMGGSDQWGNI+ GI+LG RL TP+L+ALTSPLLTT+SG KMGK+
Sbjct: 181 AYDFVELNKRYGLRVQMGGSDQWGNIVNGIELGHRLGTPQLYALTSPLLTTSSGAKMGKS 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           L+GAIWLN +M SPY FWQYWRN +D DV  F K  TTLPM+EI +++ L+G EINEAKK
Sbjct: 241 LNGAIWLNADMLSPYQFWQYWRNTEDLDVTRFLKLYTTLPMTEIAKLSALKGTEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+ATEIT M+HGR  A +A   A + F+     +++P+I I+  E+  G+GLLTL+V+AG
Sbjct: 301 ILATEITAMLHGRTLANEALETARKTFEEKTFGENLPSIKINATELKVGIGLLTLLVQAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            A S +EARR+++   I++N+ II NE   I  +D ++   IKLSFGKK H++ 
Sbjct: 361 LAKSNSEARRYVQGGGIRVNDQIIENETHLIVEKDVNADEVIKLSFGKKKHVLV 414


>gi|319407238|emb|CBI80877.1| Tyrosyl-tRNA synthetase [Bartonella sp. 1-1C]
          Length = 417

 Score =  531 bits (1369), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 250/414 (60%), Positives = 320/414 (77%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M AFKS+FL I+SERGFIHQIS+ + LD L  +  VTAYIG+D TASSLHAG L Q+M+L
Sbjct: 1   MYAFKSEFLRIISERGFIHQISDEKGLDDLFLKETVTAYIGFDPTASSLHAGSLLQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            WLQKTGH+PI LMGGGT +IGDPSF+DE+RR++   +I ENI  IK IF+S++ +G  K
Sbjct: 61  HWLQKTGHRPIVLMGGGTGLIGDPSFKDEARRLLTHNDISENIMSIKKIFTSYLTFGDKK 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           TDA ++NN  WLC++ Y++ LR +G +FSVNRMLSF+SVR RL+RE SLSFLEFNYMILQ
Sbjct: 121 TDACIVNNAEWLCNLSYLEFLRSVGKYFSVNRMLSFDSVRLRLEREHSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVEL K YD R+QMGGSDQWGNI+ GI+LG RL TP+L+ALTSPLLTT+SG KMGK+
Sbjct: 181 AYDFVELNKRYDLRVQMGGSDQWGNIVNGIELGHRLGTPQLYALTSPLLTTSSGAKMGKS 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           L+GAIWLN +M SPY FWQYWRN +D DV  F K  TTLP++EI +++ L+  EINEAKK
Sbjct: 241 LNGAIWLNADMLSPYQFWQYWRNTEDLDVTRFLKLYTTLPLTEIAKLSALKSTEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+ATEIT M+HGR  A +A   A + F+     +++P+I I+  E+  G+GLLTL+V+AG
Sbjct: 301 ILATEITAMLHGRTLANEALETARKTFEEKTFGENLPSIKINATELKVGIGLLTLLVQAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            A S +EARR+++   I++N+ II NE   I  +D +    IKLSFGKK H++ 
Sbjct: 361 LAKSNSEARRYVQGGGIRVNDQIIENETHLIVEKDVNVDEVIKLSFGKKKHVLI 414


>gi|241204833|ref|YP_002975929.1| tyrosyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM1325]
 gi|240858723|gb|ACS56390.1| tyrosyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM1325]
          Length = 418

 Score =  530 bits (1364), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 245/414 (59%), Positives = 316/414 (76%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  FKSDFL  L ERGFIHQ+S+   LD L ++  VTAYIG+D TA SLHAG L Q+M+L
Sbjct: 1   MSEFKSDFLRTLKERGFIHQVSDESGLDDLFAKETVTAYIGFDPTAPSLHAGSLIQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            W+QKTGH+ ISLMGGGT ++GDPSF++E+R++M    I+ NI  IK +FS+++ YG G 
Sbjct: 61  HWMQKTGHRAISLMGGGTGMVGDPSFKEEARQLMTVDTIEGNIASIKRVFSNYLNYGDGP 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
            DALM+NN  WL S+ Y++ LR++G  FSVNRMLSF+SV++RL REQSLSFLEFNYMILQ
Sbjct: 121 KDALMINNAEWLRSLNYLEFLRDVGKHFSVNRMLSFDSVKTRLDREQSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVELAK YDCRLQMGGSDQWGNI+ GIDLG R+ T +L+ALTSPLLTT+SG KMGK+
Sbjct: 181 AYDFVELAKRYDCRLQMGGSDQWGNIVNGIDLGHRMGTQQLYALTSPLLTTSSGAKMGKS 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
            +GAIWLN +M S Y+FWQYWRN +DADV  F K  TTLPM E+ R++ L G EINE KK
Sbjct: 241 ATGAIWLNADMLSAYDFWQYWRNTEDADVSRFLKLYTTLPMDEVARLSALGGSEINEVKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+ATE+T ++HGR  AE+AA  A + F+    S+++P++ I   E+  G+GLL+LIV+AG
Sbjct: 301 ILATEVTAILHGRPAAEQAAETARKTFEEGSLSENLPSVDIPATELDGGIGLLSLIVRAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            A S  EARRH++  A++IN+  +++E+  I   +  + G IKLS GKK HI+ 
Sbjct: 361 LAASNGEARRHVQGGAVRINDEAVNDERKMIGSGEITADGVIKLSLGKKKHILI 414


>gi|163868345|ref|YP_001609554.1| tyrosyl-tRNA synthetase [Bartonella tribocorum CIP 105476]
 gi|161018001|emb|CAK01559.1| Tyrosyl-tRNA synthetase [Bartonella tribocorum CIP 105476]
          Length = 417

 Score =  529 bits (1363), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 251/414 (60%), Positives = 323/414 (78%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M AFKSDFL I+SERGFIHQIS+ + LD L S+  V+AY G+D TASSLHAG L Q+M+L
Sbjct: 1   MFAFKSDFLHIMSERGFIHQISDEKGLDDLFSKETVSAYTGFDPTASSLHAGSLLQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
           +WLQKTGH+PI+LMGGGT +IGDPSF+DE+RR++  ++I  NI+ IK +F++++ +G  +
Sbjct: 61  YWLQKTGHRPIALMGGGTGLIGDPSFKDEARRLLTQEDIAANIDGIKKVFANYLTFGDRE 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           TDA ++NN  WLC + Y++ LR++G  FSVNRMLSF+SVR RL+RE SLSFLEFNYMILQ
Sbjct: 121 TDACIVNNAEWLCHLNYLEFLRDVGKHFSVNRMLSFDSVRLRLEREHSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVEL K Y  R+QMGGSDQWGNII GI+LG RL TP+L+ALTSPLLTT+SG KMGK+
Sbjct: 181 AYDFVELYKRYGLRMQMGGSDQWGNIINGIELGHRLGTPQLYALTSPLLTTSSGAKMGKS 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           L+GA+WLN +M SPY FWQYWRN +DADV  F K  TTLPM EI +++ LQG EINEAKK
Sbjct: 241 LNGAVWLNADMLSPYQFWQYWRNTEDADVTRFLKLYTTLPMDEILKLSLLQGTEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+ATE+T M+HGR  A+ AA  A + F+     +++PT+ +S  E+  G GLL+L+VKAG
Sbjct: 301 ILATEVTAMLHGRALADAAAETARKTFEEKTLGENLPTVEMSAIELKTGTGLLSLLVKAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            A S +EARRH++   I++N+ II +E   I  +D  + G IKLSFGKK HI+ 
Sbjct: 361 LAKSNSEARRHIQGGGIRVNDQIIKDETHLIIEKDVTAEGIIKLSFGKKKHILI 414


>gi|240850610|ref|YP_002972010.1| tyrosyl-tRNA synthetase [Bartonella grahamii as4aup]
 gi|240267733|gb|ACS51321.1| tyrosyl-tRNA synthetase [Bartonella grahamii as4aup]
          Length = 417

 Score =  529 bits (1362), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 248/414 (59%), Positives = 322/414 (77%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M AFKSDFL I+SERGFIHQIS+ + LD L S+  ++AY G+D TASSLHAG L Q+M+L
Sbjct: 1   MFAFKSDFLHIMSERGFIHQISDEKGLDDLFSKETISAYTGFDPTASSLHAGSLLQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
           +WLQKTGH+PI+LMGGGT +IGDPSF+DE+RR++   +I  NI+ IK +F++++ +G  +
Sbjct: 61  YWLQKTGHRPIALMGGGTGLIGDPSFKDEARRLLTQDDIAANIDGIKKVFANYLTFGDQE 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           TDA ++NN  WLC++ Y++ LR++G  FSVNRMLSF+SVR RL+RE SLSFLEFNYMILQ
Sbjct: 121 TDACIVNNAEWLCNLNYLEFLRDVGKHFSVNRMLSFDSVRLRLEREHSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVEL K Y  R+QMGGSDQWGNII GI+LG RL TP+L+ALTSPLLTT+SG KMGK+
Sbjct: 181 AYDFVELYKRYGLRMQMGGSDQWGNIINGIELGHRLGTPQLYALTSPLLTTSSGAKMGKS 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           L+GAIWLN +M SPY FWQYWRNI+DADV  F K  T LPM EI +++ LQG EINEAKK
Sbjct: 241 LNGAIWLNADMLSPYQFWQYWRNIEDADVTRFLKLYTPLPMDEILKLSVLQGTEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+ATE+T M+HGR  A  AA  A + F+     +++PT+  +  E+ +G+GLLTL+V+AG
Sbjct: 301 ILATEVTAMLHGRALANAAAETARKTFEEKTLGENLPTVETNASELKKGVGLLTLLVQAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            A S +EARRH++   +++N+ II +E   I   D  + G IKLSFGKK H++ 
Sbjct: 361 LAKSNSEARRHVQGGGVRVNDQIIEDETHLIIEGDVSAEGIIKLSFGKKKHVVI 414


>gi|153009590|ref|YP_001370805.1| tyrosyl-tRNA synthetase [Ochrobactrum anthropi ATCC 49188]
 gi|151561478|gb|ABS14976.1| tyrosyl-tRNA synthetase [Ochrobactrum anthropi ATCC 49188]
          Length = 417

 Score =  529 bits (1362), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 244/414 (58%), Positives = 318/414 (76%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  FKSDFL  LSERGFIHQIS+   LD L ++  VTAYIG+D TA SLHAG L Q+M+L
Sbjct: 1   MSGFKSDFLRTLSERGFIHQISDESGLDELLAKETVTAYIGFDPTAPSLHAGGLIQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            WLQ+TGHKP++LMGGGT ++GDPSF+DE+R++M    I ENI  IK +F++++ +G   
Sbjct: 61  HWLQQTGHKPVALMGGGTGMVGDPSFKDEARKLMTEDTIAENIAGIKRVFANYLTFGDSA 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           TDALM+NN  WL +I Y++ LR++G  FSVNRMLSF+SV++RL REQSLSFLEFNYMILQ
Sbjct: 121 TDALMVNNADWLRNINYLEFLRDVGRHFSVNRMLSFDSVKTRLDREQSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVEL+K YD RLQMGGSDQWGNII GIDLG R+ TP+L+ALTSPLLTTASG KMGK+
Sbjct: 181 AYDFVELSKRYDLRLQMGGSDQWGNIINGIDLGHRMGTPQLYALTSPLLTTASGQKMGKS 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           L GAIWLN EM S Y+FWQYWRN +DADV  F K  TTLP+ EI ++A L+G EINEAKK
Sbjct: 241 LGGAIWLNAEMLSAYDFWQYWRNTEDADVERFLKLYTTLPLDEIAKLAALEGVEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+ATE+T M+HGR+ A+++A  A + F+    S+++PT+ + K  ++ G+G+L L+V A 
Sbjct: 301 ILATEVTAMLHGRDAADESAETARKTFEDGELSENLPTVGVHKATLNSGIGVLALMVLAE 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
             T+  EARRH++  A++IN+  +S+ ++ +     +  G IKLS GKK H++ 
Sbjct: 361 LCTTNGEARRHVEGGAVRINDEPVSDPRMTVDAGALNDQGVIKLSLGKKRHVLI 414


>gi|209549500|ref|YP_002281417.1| tyrosyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM2304]
 gi|209535256|gb|ACI55191.1| tyrosyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM2304]
          Length = 418

 Score =  529 bits (1362), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 244/413 (59%), Positives = 316/413 (76%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  FKSDFL  L ERGFIHQ+S+ R LD + ++  VTAYIGYD TASSLH GHLTQ+M+L
Sbjct: 1   MSEFKSDFLRTLKERGFIHQVSDERGLDDMFAKETVTAYIGYDPTASSLHVGHLTQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            WLQ TGH+PISLMGGGT ++GDPSF++E+R++M    I++NI  IK  FS+++ Y    
Sbjct: 61  HWLQATGHRPISLMGGGTGMVGDPSFKEEARQLMTIDTIEQNIASIKNCFSNYLDYDKSG 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
             ALM+NN  WL S+ Y++ LR++G  FSVNRMLSF+SV++RL REQSLSFLEFNYMILQ
Sbjct: 121 NAALMINNAEWLRSLNYLEFLRDVGRHFSVNRMLSFDSVKTRLDREQSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVELAK YDCRLQMGGSDQWGNI+ GIDLG R+ T +L+ALTSPLLTT+SG KMGK+
Sbjct: 181 AYDFVELAKRYDCRLQMGGSDQWGNIVNGIDLGHRMGTQQLYALTSPLLTTSSGAKMGKS 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
            SGA+WLN ++   Y+FWQYWRN +DADV  F K  TTLPM EI R++ L G E+NE KK
Sbjct: 241 ASGAVWLNADLLPVYDFWQYWRNTEDADVPRFLKLFTTLPMDEIARLSALGGSELNEVKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+ATE+TT++HGR  AE+AA  A + F+    S+++P++ I   E+  G+GLL+L+V+AG
Sbjct: 301 ILATEVTTILHGRPAAEQAAETARKTFEEGGLSENLPSVDIPATELDGGIGLLSLMVRAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            A S  EARRH++  A+++N+  +S+E+  I   +  + G IKLS GKK HI+
Sbjct: 361 LAGSNGEARRHVQGGAVRVNDEAVSDERRLIGSSEITADGVIKLSLGKKKHIL 413


>gi|121602511|ref|YP_989096.1| tyrosyl-tRNA synthetase [Bartonella bacilliformis KC583]
 gi|120614688|gb|ABM45289.1| tyrosyl-tRNA synthetase [Bartonella bacilliformis KC583]
          Length = 417

 Score =  528 bits (1361), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 244/414 (58%), Positives = 323/414 (78%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M AFKS+FL ++ ERGFIHQIS+ + LD L  + +VTAYIG+D T+SSLHAG L Q+M+L
Sbjct: 1   MFAFKSEFLHVMKERGFIHQISDEKGLDDLFLKEIVTAYIGFDPTSSSLHAGSLLQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
           +WLQKTGHKPI L+GGGT +IGDPSF++ESR ++   +I +NI  IK +F++++ +G  K
Sbjct: 61  YWLQKTGHKPIVLIGGGTGMIGDPSFKEESRILLTQDDIAKNIVGIKKVFANYLTFGDKK 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           TDA ++NN  WLC+I Y++ LR++G  FSVNRMLSF+SVR RL+RE SLSFLEFNYMILQ
Sbjct: 121 TDAGIVNNAEWLCNINYLEFLRDVGKHFSVNRMLSFDSVRLRLEREHSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           +YDFVEL K Y  R+QMGGSDQWGNI+ GI+LG RL TP+L+ALTSPLLTT+SG KMGK+
Sbjct: 181 SYDFVELNKRYGLRVQMGGSDQWGNIVNGIELGHRLGTPQLYALTSPLLTTSSGVKMGKS 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           LSGAIWLN +M SPY FWQYWRN +DADV  F K  TTLPM+EI +++ LQG EINEAKK
Sbjct: 241 LSGAIWLNADMLSPYQFWQYWRNTEDADVTRFLKLYTTLPMNEIAKLSALQGTEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+ATEIT M+HG   A +AA  A + F+      ++P I I+  E+ +G GLL+L+V+AG
Sbjct: 301 ILATEITAMLHGYTVANEAAETARKTFEEKTLGDNLPAIKINAIELKKGAGLLSLLVQAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            A S +EARRH++   +++N+ I+++E   I  +D ++T ++K+SFGKK HI+ 
Sbjct: 361 LAKSNSEARRHIQGGGVRVNDQIVTDETRLISEEDINATESVKISFGKKKHILI 414


>gi|15965492|ref|NP_385845.1| tyrosyl-tRNA synthetase [Sinorhizobium meliloti 1021]
 gi|307302613|ref|ZP_07582369.1| tyrosyl-tRNA synthetase [Sinorhizobium meliloti BL225C]
 gi|307318460|ref|ZP_07597894.1| tyrosyl-tRNA synthetase [Sinorhizobium meliloti AK83]
 gi|81634526|sp|Q92PK5|SYY_RHIME RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|15074673|emb|CAC46318.1| Probable tyrosyl-tRNA synthetase [Sinorhizobium meliloti 1021]
 gi|306895800|gb|EFN26552.1| tyrosyl-tRNA synthetase [Sinorhizobium meliloti AK83]
 gi|306902977|gb|EFN33568.1| tyrosyl-tRNA synthetase [Sinorhizobium meliloti BL225C]
          Length = 417

 Score =  528 bits (1360), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 248/414 (59%), Positives = 315/414 (76%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  FKSDFL  LSERGFIHQ S+   LD L     VTAYIG+D TA+SLHAG L Q+M+L
Sbjct: 1   MSEFKSDFLHTLSERGFIHQTSDDAGLDQLFRTETVTAYIGFDPTAASLHAGGLIQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            WLQ TGH+PISLMGGGT ++GDPSF+DE+R++M  + I  NI  IK +FS++++YG G 
Sbjct: 61  HWLQATGHRPISLMGGGTGMVGDPSFKDEARQLMTPETIAANIASIKTVFSNYLRYGDGP 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
            DALM+NN  WL  I Y++ LR++G  FSVNRMLSF+SV+ RL+REQSLSFLEFNYMILQ
Sbjct: 121 KDALMINNADWLLGINYLEFLRDVGRHFSVNRMLSFDSVKMRLEREQSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVEL +   CRLQMGGSDQWGNI+ GIDLG R+ TP+L+ALTSPLLTTASG KMGK+
Sbjct: 181 AYDFVELYERTGCRLQMGGSDQWGNIVNGIDLGHRMGTPQLYALTSPLLTTASGAKMGKS 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           LSGA+WLN +M  PY FWQYWRN +DADV  F K  TTLPM+EI+R++KL G EINE KK
Sbjct: 241 LSGAVWLNPDMLGPYEFWQYWRNTEDADVARFLKLYTTLPMAEINRLSKLGGSEINEVKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           ++ATE+T M+HGR  AE+AA  A + F+    ++++P++ +   E+  G+GLLTL+V+AG
Sbjct: 301 VLATEVTAMLHGRAAAEQAAETARKTFEEGALAENLPSVEVPAPELESGLGLLTLLVRAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            A S  EARRH++  A++IN+  +S+E+  I   D    G IKLS GKK H++ 
Sbjct: 361 LAASNGEARRHVQGGAVRINDDQVSDERRVIGSGDVTGDGVIKLSLGKKKHLLV 414


>gi|150396686|ref|YP_001327153.1| tyrosyl-tRNA synthetase [Sinorhizobium medicae WSM419]
 gi|150028201|gb|ABR60318.1| tyrosyl-tRNA synthetase [Sinorhizobium medicae WSM419]
          Length = 417

 Score =  527 bits (1357), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 248/414 (59%), Positives = 314/414 (75%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  FKSDFL  LSERGFIHQ S+   LD L     VTAYIG+D TA+SLHAG L Q+M+L
Sbjct: 1   MSEFKSDFLHTLSERGFIHQTSDNGGLDQLFLTETVTAYIGFDPTAASLHAGGLIQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            WLQ TGH+PISLMGGGT ++GDPSF+DE+R++M  + I  NI  IK +FS+++KYG G 
Sbjct: 61  HWLQATGHRPISLMGGGTGMVGDPSFKDEARQLMTPETIAANIASIKTVFSNYLKYGDGP 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
            DALM+NN  WL  I Y++ LR++G  FSVNRMLSF+SV+ RL+REQSLSFLEFNYMILQ
Sbjct: 121 KDALMINNADWLLGINYLEFLRDVGRHFSVNRMLSFDSVKMRLEREQSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVEL +   CRLQMGGSDQWGNI+ GIDLG R+ TP+L+ALTSPLLTTASG KMGK+
Sbjct: 181 AYDFVELYQRTGCRLQMGGSDQWGNIVNGIDLGHRMGTPQLYALTSPLLTTASGAKMGKS 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           LSGA+WLN +M  PY FWQYWRN +DADV  F K  TTLPM+EIDR++KL G EINE KK
Sbjct: 241 LSGAVWLNPDMLGPYEFWQYWRNTEDADVTRFLKLYTTLPMAEIDRLSKLGGSEINEVKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           ++ATE+T M+HGR  AE+AA  A + F+    ++++P+I +   E   G+GLL L+V+AG
Sbjct: 301 VLATEVTAMLHGRTAAEQAAETARKTFEEGALAENLPSIEVPAREFESGLGLLALMVRAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            A S  EARRH++  A++IN+  +++E+  +  +D    G IKLS GKK H++ 
Sbjct: 361 LAASNGEARRHVQGGAVRINDDQVTDERRVVGSRDVSGDGVIKLSLGKKKHLLV 414


>gi|319784079|ref|YP_004143555.1| tyrosyl-tRNA synthetase [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317169967|gb|ADV13505.1| tyrosyl-tRNA synthetase [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 417

 Score =  526 bits (1356), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 237/415 (57%), Positives = 315/415 (75%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           MPAFKSDFL  +SERGFIHQ S+   LD + ++  VTAYIG+D TA SLHAG L Q+M+L
Sbjct: 1   MPAFKSDFLRTMSERGFIHQTSDDAGLDNIFAKETVTAYIGFDATAKSLHAGSLIQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            WLQ+TGH+PI+LMGGGTS+IGDPSF+DE+R+++  Q+I++N+  I+  F  ++K+G+G 
Sbjct: 61  HWLQQTGHRPIALMGGGTSMIGDPSFKDEARKLLTPQDIEDNLAGIRRNFMPYLKFGSGP 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
            DA+M+NN  WL  I Y++ LR++G  FSVNRML+F+SV+ RL REQSLSFLEFNYMILQ
Sbjct: 121 NDAIMVNNADWLMEINYVNFLRDVGRHFSVNRMLAFDSVKLRLDREQSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVEL K   CRLQMGGSDQWGNII GIDLG R++  +L+ALT+PLLTT+SG KMGK+
Sbjct: 181 AYDFVELYKRLGCRLQMGGSDQWGNIINGIDLGRRMEDAQLYALTTPLLTTSSGAKMGKS 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
            SGA+WL+ EM SPY FWQYWRN +DADV  F K  TTLP+ E+ R+ +L G EINEAKK
Sbjct: 241 ASGAVWLDAEMLSPYEFWQYWRNTEDADVARFLKLYTTLPLDEVARLERLGGSEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+ATEIT ++HGR  AE+A+  A + F+    ++ +PT+ + K  +  G+G+L+L+V AG
Sbjct: 301 ILATEITALLHGRAAAEQASDTARKTFEEGALAESLPTVEVDKTALETGVGILSLLVTAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            A S  EARRH++  A+++N+  +S+E+  +  QD      +KLS GKK HI+  
Sbjct: 361 LAASNGEARRHVQGGAVRLNDEPVSDERRLVTPQDLSPENVVKLSLGKKKHILVR 415


>gi|319408607|emb|CBI82262.1| Tyrosyl-tRNA synthetase [Bartonella schoenbuchensis R1]
          Length = 417

 Score =  525 bits (1353), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 250/414 (60%), Positives = 321/414 (77%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M AFKS+FL I+SERGFIHQIS+ + LD L S+ +VTAYIG+D TA SLHAG L Q+M+L
Sbjct: 1   MFAFKSEFLHIMSERGFIHQISDEKGLDDLFSKEIVTAYIGFDPTALSLHAGSLLQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            WLQKTGH+PI LMGGGT +IGDPSF+DE+RR++   +I +NI  I+ +F++++ +G GK
Sbjct: 61  HWLQKTGHRPIVLMGGGTGVIGDPSFKDEARRLLTHDDIAKNIVGIEKVFANYLTFGDGK 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           TDA ++NN  WLC +KY++ LR+IG  FSVNRMLSF+SV+ RL+RE  LSFLEFNYMILQ
Sbjct: 121 TDARIVNNAEWLCDLKYLEFLRDIGKHFSVNRMLSFDSVKLRLERENFLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVEL K Y  R+QMGGSDQWGNII GI+LG RL  P+L+ALTSPLLTT+SG KMGK+
Sbjct: 181 AYDFVELNKRYGLRVQMGGSDQWGNIINGIELGHRLGAPQLYALTSPLLTTSSGAKMGKS 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           L+GAIWLN +M SPY FWQYWRN +DADV+ F K  TTLPM+EI R++ LQG EINEAKK
Sbjct: 241 LNGAIWLNSDMLSPYQFWQYWRNTEDADVIRFLKLYTTLPMNEIARLSTLQGTEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+ATEIT M+HG+  A+ AA  A + F+    + ++PTI I+  E+  G GLL+L+V+AG
Sbjct: 301 ILATEITAMLHGKALADAAAETARKTFEEKTLADNLPTIEINATELKIGTGLLSLLVQAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            A S +EARRH++   +++N+ I+ +E   I   D    G IKLSFGKK H++ 
Sbjct: 361 LAKSNSEARRHVQGGGVRVNDKIVEDETRLIVEDDVSEIGVIKLSFGKKKHVLI 414


>gi|116252334|ref|YP_768172.1| tyrosyl-tRNA synthetase [Rhizobium leguminosarum bv. viciae 3841]
 gi|115256982|emb|CAK08076.1| putative tyrosyl-tRNA synthetase [Rhizobium leguminosarum bv.
           viciae 3841]
          Length = 418

 Score =  525 bits (1352), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 249/414 (60%), Positives = 319/414 (77%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  FKSDFL  L ERGFIHQ+S+   LD L ++  VTAYIG+D TA SLHAG L Q+M+L
Sbjct: 1   MSEFKSDFLRTLKERGFIHQVSDESGLDDLFAKETVTAYIGFDPTAPSLHAGSLIQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            W+QKTGH+ ISLMGGGT ++GDPSF++E+R++M    I+ NI  IK +FS+++ YG G 
Sbjct: 61  HWMQKTGHRAISLMGGGTGMVGDPSFKEEARQLMTVDTIEGNIASIKRVFSNYLNYGDGP 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
            DALM+NN  WL S+ Y++ LR++G  FSVNRMLSF+SV++RL REQSLSFLEFNYMILQ
Sbjct: 121 KDALMINNAEWLRSLNYLEFLRDVGKHFSVNRMLSFDSVKTRLDREQSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVELAK YDCRLQMGGSDQWGNI+ GIDLG R+ TP+L+ALTSPLLTT+SG KMGK+
Sbjct: 181 AYDFVELAKRYDCRLQMGGSDQWGNIVNGIDLGHRMGTPQLYALTSPLLTTSSGAKMGKS 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
            +GA+WLN +M S Y+FWQYWRN +DADV  F K  TTLPM EI R+A L G EINE KK
Sbjct: 241 ATGAVWLNADMLSAYDFWQYWRNTEDADVSRFLKLYTTLPMDEIARLAALGGSEINEVKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+ATE+T ++HGRE AE+AA  A + F+    S+++P++ I   E+  G+GLL+LIV+AG
Sbjct: 301 ILATEVTAILHGREAAEQAAETARKTFEEGSLSENLPSVDIPATELDGGIGLLSLIVRAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            A+S  EARRH++  A++IN+  +S+E+  I   +  + G IKLS GKK HI+ 
Sbjct: 361 LASSNGEARRHVQGGAVRINDEAVSDERKMIGSGEITADGVIKLSLGKKKHILI 414


>gi|319898911|ref|YP_004159004.1| Tyrosyl-tRNA synthetase [Bartonella clarridgeiae 73]
 gi|319402875|emb|CBI76426.1| Tyrosyl-tRNA synthetase [Bartonella clarridgeiae 73]
          Length = 417

 Score =  525 bits (1352), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 246/414 (59%), Positives = 320/414 (77%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M AFKS+FL I++ERGFI+QIS+ + LD L S+  VTAYIG+D TASSLHAG L Q+M+L
Sbjct: 1   MFAFKSEFLHIMNERGFINQISDKKGLDDLFSKETVTAYIGFDPTASSLHAGSLLQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
           +WLQKTGH+PI LMGGGT +IGDPSF+DE+RR++   +I ENI  I+ IF+ ++ +G  K
Sbjct: 61  YWLQKTGHRPIVLMGGGTGLIGDPSFKDEARRLLTHNDIAENITSIEKIFTKYLTFGDKK 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           TDA ++NN  WLC + Y++ LR++G +FSVNRMLSF+SVR RL+RE SLSFLEFNYMILQ
Sbjct: 121 TDACIVNNVEWLCHLNYLEFLRDVGKYFSVNRMLSFDSVRLRLEREYSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVEL K Y  RLQMGGSDQWGNI+ GI+LG RL TP+L+ALTSPLLT +SGTKMGK+
Sbjct: 181 AYDFVELNKRYGLRLQMGGSDQWGNIVNGIELGHRLGTPQLYALTSPLLTASSGTKMGKS 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           L+GAIWLN +M SPY FWQYWRN +D DV  F K  TTL M+EI +++ LQ  EINEAKK
Sbjct: 241 LNGAIWLNADMLSPYQFWQYWRNTEDLDVTRFLKLYTTLSMTEIAKLSALQSTEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+ATE+T M+HGR  A +A   A + F+     +++P+I I+  E+  G+GLLTL+V+AG
Sbjct: 301 ILATEVTAMLHGRALANEALETARKTFEEKTFGENLPSIEINATELKIGIGLLTLLVRAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            A S +EARR+++   ++IN+ II +E   I  +D ++   IKLSFGKK H++ 
Sbjct: 361 LAKSNSEARRYVQGGGVRINDQIIEDEMYFIVEKDVNANEVIKLSFGKKKHVLI 414


>gi|39935526|ref|NP_947802.1| tyrosyl-tRNA synthetase [Rhodopseudomonas palustris CGA009]
 gi|81562733|sp|Q6N703|SYY_RHOPA RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|39649379|emb|CAE27901.1| tyrosyl-tRNA synthetase [Rhodopseudomonas palustris CGA009]
          Length = 418

 Score =  525 bits (1351), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 238/418 (56%), Positives = 312/418 (74%), Gaps = 1/418 (0%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M AFKSDF+++L  RGFIHQIS+P  LD L ++G V AY+GYD TA+SLH GHL  +M+L
Sbjct: 1   MTAFKSDFMNVLQSRGFIHQISDPDSLDALAAKGEVVAYVGYDCTAASLHVGHLLSIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            WLQ TG+KPI+LMGGGT+ +GDPS RDE+R+++  ++I  N E IKG FS FIK+G G 
Sbjct: 61  HWLQATGNKPIALMGGGTTRVGDPSGRDETRKILTYEQIDANKESIKGTFSKFIKFGDGH 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           +DALM +N  WL  + YI++LREIG  FS+NRML+ +SV+ RL REQ LSF+EFNYMILQ
Sbjct: 121 SDALMADNAEWLTKLNYIEMLREIGRHFSINRMLTMDSVKLRLDREQELSFIEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           +YDFVELA+ Y C LQMGGSDQWGNI+ G+DLG R+ T +L ALT PLLTTASG KMGKT
Sbjct: 181 SYDFVELARRYKCNLQMGGSDQWGNIVTGVDLGRRMGTHQLHALTCPLLTTASGAKMGKT 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
            +GA+WLN +M +PY++WQYWRN +DADV  F K  T LPM EI+R++KLQG EIN+AKK
Sbjct: 241 AAGAVWLNGDMLAPYDYWQYWRNTEDADVGRFLKLFTLLPMDEIERLSKLQGAEINDAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV-KA 359
           I+ATE T ++HGRE A+KA T A   F+    +Q +P++ IS+ E+  G+G+L     K 
Sbjct: 301 ILATEATALMHGREAADKAETTARTTFEQGGTAQDLPSVEISRGELDAGIGVLVAFAEKT 360

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           G   S  EARR +K+  +K+N++ +++EK+ +   D  S G IKLS GKK H++  L 
Sbjct: 361 GLVASNGEARRQIKAGGLKVNDAPVTDEKMTLTATDLSSDGVIKLSMGKKKHVLLRLA 418


>gi|319405666|emb|CBI79289.1| Tyrosyl-tRNA synthetase [Bartonella sp. AR 15-3]
          Length = 417

 Score =  525 bits (1351), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 245/413 (59%), Positives = 319/413 (77%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M AFKS+FL  +SERGFIHQIS+ + LD L  +  VTAYIG+D TASSLHAG L Q+M+L
Sbjct: 1   MFAFKSEFLHTISERGFIHQISDEKGLDDLFLKETVTAYIGFDPTASSLHAGSLLQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            WLQKTGH+PI LMGGGT +IGDPSF+DE+RR++   +I ENI  IK IF++++ +G  K
Sbjct: 61  HWLQKTGHRPIILMGGGTGLIGDPSFKDEARRLLTHNDIIENIMSIKKIFTNYLTFGNKK 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           TDA ++NN  WLC + Y++ LR +G +FS+NRMLSF+SVR RL+RE SLSFLEFNYMILQ
Sbjct: 121 TDACIVNNAEWLCHLNYLEFLRNVGKYFSINRMLSFDSVRLRLEREHSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVEL K Y  R+QMGGSDQWGNI+ GI+LG RL TP+L+ALTSPLLTT+SG KMGK+
Sbjct: 181 AYDFVELNKRYGLRVQMGGSDQWGNIVNGIELGHRLGTPQLYALTSPLLTTSSGAKMGKS 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           L+GAIWLN +M SPY FWQYWRN +D DV  F K  TTLPM+EI +++ L+  EINEAKK
Sbjct: 241 LNGAIWLNADMFSPYEFWQYWRNTEDLDVTRFLKLYTTLPMTEIAKLSALKSAEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+ATE+T M+HGR  A +A   A + F+  +  +++P I I+  E+  G+G+LTL+VKAG
Sbjct: 301 ILATEVTAMLHGRTLANEALETACKTFEEKMFGENLPNIKINATELKAGIGVLTLLVKAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            A S +EARR+++   +++N+ II +EK  I  +D ++   IKLSFGKK H++
Sbjct: 361 LARSNSEARRYIQGGGVRVNDQIIEDEKHLIVEKDVNANEVIKLSFGKKKHVL 413


>gi|254693653|ref|ZP_05155481.1| tyrosyl-tRNA synthetase [Brucella abortus bv. 3 str. Tulya]
 gi|261213920|ref|ZP_05928201.1| tyrosyl-tRNA synthetase [Brucella abortus bv. 3 str. Tulya]
 gi|260915527|gb|EEX82388.1| tyrosyl-tRNA synthetase [Brucella abortus bv. 3 str. Tulya]
          Length = 417

 Score =  525 bits (1351), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 242/414 (58%), Positives = 315/414 (76%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  FKSDFL  LSERGFIHQIS+   LD L ++  VTAYIG+D TA SLHAG L Q+M+L
Sbjct: 1   MSGFKSDFLRTLSERGFIHQISDESGLDELLAKETVTAYIGFDPTAPSLHAGGLIQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
           +WLQ+TGHKP++LMGGGT ++GDPSF+DE+R++M    I EN+  IK +F++++ +G G 
Sbjct: 61  YWLQQTGHKPVALMGGGTGMVGDPSFKDEARKLMTEDTIAENMASIKRVFANYLTFGDGA 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
            DALM+NN  WL +I Y++ LR++G  FSVNRMLSF+SV+ RL REQSLSFLEFNYMILQ
Sbjct: 121 NDALMVNNGEWLRNINYLEFLRDVGRHFSVNRMLSFDSVKLRLDREQSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVEL K Y  RLQMGGSDQWGNI+ GIDLG R+ TP+L+ALTSPLLTTASG KMGK+
Sbjct: 181 AYDFVELNKRYGLRLQMGGSDQWGNIVNGIDLGHRMGTPQLYALTSPLLTTASGQKMGKS 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           L GAIWLN +M S Y+FWQYWRN +DADV  F K  TTLP+ EI R+A+L G EINEAKK
Sbjct: 241 LGGAIWLNADMLSAYDFWQYWRNTEDADVERFLKLYTTLPLDEIARLAELGGAEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+ATE+T M+HGR+ AE+ A  A + F+    S+++PT+ + K  ++ G+G+L L+V A 
Sbjct: 301 ILATEVTAMLHGRDAAEETAETARKTFEDGELSENLPTVGVHKATLNDGIGVLALMVLAE 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
             T+  EARRH++  A++IN+  +S+ ++ +     +  G IKLS GKK H++ 
Sbjct: 361 LCTTNGEARRHVEGGAVRINDEPVSDPRMVVNAAALNDQGLIKLSLGKKRHVLI 414


>gi|86357873|ref|YP_469765.1| tyrosyl-tRNA synthetase [Rhizobium etli CFN 42]
 gi|86281975|gb|ABC91038.1| tyrosyl-tRNA synthetase protein [Rhizobium etli CFN 42]
          Length = 418

 Score =  524 bits (1350), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 241/415 (58%), Positives = 313/415 (75%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  FKSDFL  L ERGFIHQ+S+   LD L ++ VVTAY+GYD TA+SLH G+L    +L
Sbjct: 1   MSEFKSDFLRTLKERGFIHQVSDESGLDDLFAKEVVTAYVGYDATATSLHIGNLISATML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
           +WLQ+TGH+PI+LMGGGTS++GDPSFRDE R+++  + I  NIE IK IFS  +++G G 
Sbjct: 61  YWLQETGHRPIALMGGGTSMVGDPSFRDEQRKLLTPEAIATNIEGIKKIFSRILRFGDGP 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           TDA M+NN  WL  + Y++ LR++G  FSVNRMLSF+SV+ RL REQSLSFLEFNYMI+Q
Sbjct: 121 TDAFMVNNADWLMKLNYVEFLRDVGRHFSVNRMLSFDSVKLRLDREQSLSFLEFNYMIMQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
            YDFVEL++ Y CRLQMGGSDQWGNII G+DLG R+ TP+L+ALT+PLLTT+SG KMGKT
Sbjct: 181 GYDFVELSRRYGCRLQMGGSDQWGNIINGVDLGHRMGTPQLYALTTPLLTTSSGAKMGKT 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
            SGA+WLN+++ SPY+FWQYWRN +DADV  F K  T LP+SEI R+  L G EINEAKK
Sbjct: 241 ASGAVWLNEDVFSPYDFWQYWRNTEDADVGRFLKIFTRLPLSEIARLEALGGAEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+ATE T +VHGR  AE +A  A   F+    ++++P++ I   E+  G+GLL+L+V+AG
Sbjct: 301 ILATEATAIVHGRVAAEASAETARTTFEEGRIAENLPSVEIPATELDGGIGLLSLMVRAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            A S  EARRH++  A+++N+  IS+E+  I   +  + G IKLS GKK HI+  
Sbjct: 361 LAGSNGEARRHVQGGAVRVNDEAISDERRLIGSGEITADGVIKLSLGKKKHILIR 415


>gi|13470335|ref|NP_101900.1| tyrosyl-tRNA synthetase [Mesorhizobium loti MAFF303099]
 gi|75544372|sp|Q98NS5|SYY_RHILO RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|14021073|dbj|BAB47686.1| tyrosyl-tRNA synthetase [Mesorhizobium loti MAFF303099]
          Length = 417

 Score =  521 bits (1343), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 236/415 (56%), Positives = 309/415 (74%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           MPAFKSDFL  +SERGFIHQIS+   LD L ++  VTAY+GYD TA+SLH G+L    +L
Sbjct: 1   MPAFKSDFLRTMSERGFIHQISDETGLDQLFAKETVTAYVGYDATATSLHIGNLISATML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
           +WLQ+TGH+PI+LMGGGTS+IGDPSFRD+ R ++  + I  NIE IK IF   +++G G 
Sbjct: 61  YWLQETGHRPIALMGGGTSMIGDPSFRDDQRSLLTPEAIATNIEGIKRIFGRILRFGDGP 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
            DA+M+NN  WL  + Y++ LR++G  FSVNRML+F+SV+ RL REQSLSFLEFNYMILQ
Sbjct: 121 NDAIMVNNADWLMKLNYVEFLRDVGRHFSVNRMLTFDSVKLRLDREQSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
            YDFVELA+  +CRLQMGGSDQWGNII G+DLG R+ TP+L+ALT+PLLTT+SG KMGK+
Sbjct: 181 GYDFVELARRQNCRLQMGGSDQWGNIINGVDLGHRMGTPQLYALTTPLLTTSSGAKMGKS 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
             GA+WLN ++ SPY+FWQYWRN +DADV  F K  T LP+ EI R+A L G EINEAKK
Sbjct: 241 AKGAVWLNGDLFSPYDFWQYWRNTEDADVERFLKIFTRLPLPEIARLAALGGSEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+ATE T +VHGRE A +A   A + F+    +  +PT+   K  +  G+G+L+L+V AG
Sbjct: 301 ILATETTAIVHGREAANQAEETARKTFEEGALADTLPTVGADKAALEAGIGILSLLVTAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            A+S  EARRH++  A++IN+  +S+++  + LQD      +KLS GKK H++  
Sbjct: 361 LASSNGEARRHIQGGAVRINDQSVSDDRRMVTLQDLSPENVVKLSLGKKKHVLVR 415


>gi|192291117|ref|YP_001991722.1| tyrosyl-tRNA synthetase [Rhodopseudomonas palustris TIE-1]
 gi|192284866|gb|ACF01247.1| tyrosyl-tRNA synthetase [Rhodopseudomonas palustris TIE-1]
          Length = 418

 Score =  521 bits (1342), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 237/418 (56%), Positives = 310/418 (74%), Gaps = 1/418 (0%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M AFKSDF+++L  RGFIHQIS+P  LD L ++G V AY+GYD TA+SLH GHL  +M+L
Sbjct: 1   MTAFKSDFMNVLQSRGFIHQISDPDSLDALAAKGEVVAYVGYDCTAASLHVGHLLSIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            WLQ TG+KPI+LMGGGT+ +GDPS RDE+R+++  ++I  N E IKG FS FIK+G G 
Sbjct: 61  HWLQATGNKPIALMGGGTTRVGDPSGRDETRKILTYEQIDANKESIKGTFSKFIKFGDGH 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           +DALM +N  WL  + YI++LREIG  FS+NRML+ +SV+ RL REQ LSF+EFNYMILQ
Sbjct: 121 SDALMADNAEWLTKLNYIEMLREIGRHFSINRMLTMDSVKLRLDREQELSFIEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           +YDFVELA+ Y C LQMGGSDQWGNI+ G+DLG R+ T +L ALT PLLTTASG KMGKT
Sbjct: 181 SYDFVELARRYKCNLQMGGSDQWGNIVTGVDLGRRMGTHQLHALTCPLLTTASGAKMGKT 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
            +GA+WLN +M +PY++WQYWRN +DADV  F K  T LPM EI+R++KLQG EIN+AKK
Sbjct: 241 AAGAVWLNGDMLAPYDYWQYWRNTEDADVGRFLKLFTLLPMDEIERLSKLQGAEINDAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV-KA 359
           I+ATE T ++HGRE A+KA   A   F+    +Q +P++ IS+ E+  G+G+L     K 
Sbjct: 301 ILATEATALMHGREAADKAEATARTTFEQGGTAQDLPSVEISRGELDAGIGVLVAFAEKT 360

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           G   S  EARR +K+  +K+N++ + +EK+ +   D  S G IKLS GKK H++  L 
Sbjct: 361 GLVASNGEARRQIKAGGLKVNDAPVIDEKMTLTATDLSSDGVIKLSMGKKKHVLLRLA 418


>gi|110634136|ref|YP_674344.1| tyrosyl-tRNA synthetase [Mesorhizobium sp. BNC1]
 gi|110285120|gb|ABG63179.1| tyrosyl-tRNA synthetase [Chelativorans sp. BNC1]
          Length = 417

 Score =  520 bits (1340), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 244/415 (58%), Positives = 313/415 (75%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           MP FKSDFL ILSERGFIHQIS+   LD L  +  VT YIGYD TA+SLH GHLTQ+M+L
Sbjct: 1   MPDFKSDFLRILSERGFIHQISDEAGLDELFLRETVTGYIGYDPTAASLHVGHLTQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            WLQ+TGH+PI+LMGGGT +IGDPSF+DE+R+++  + I +N+  +K  FS ++K+G G 
Sbjct: 61  HWLQQTGHRPIALMGGGTGMIGDPSFKDEARKLLTPEAIGQNLAGMKKSFSRYLKFGDGP 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           TDA+M NN  WL  + Y+  LR++G  FSVNRMLSFESV+ RL REQSLSFLEFNYMILQ
Sbjct: 121 TDAIMANNADWLLDLNYVTFLRDVGRHFSVNRMLSFESVKLRLDREQSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVEL + Y CRLQMGGSDQWGNI+ GIDLG R++   LFALTSPLLTTASG KMGK+
Sbjct: 181 AYDFVELQRRYGCRLQMGGSDQWGNIVNGIDLGRRMEDTTLFALTSPLLTTASGAKMGKS 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
            SGA+WL+  M SPY+FWQYWRN +DADV  F K  TTLP+ EIDR+ KL G EINEAKK
Sbjct: 241 ESGAVWLDPAMLSPYDFWQYWRNTEDADVGRFLKLYTTLPLDEIDRLEKLGGAEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+ATE+T M+HGR  AE+AA  A + F+    ++ +PTI + + ++  G+G+L  +V AG
Sbjct: 301 ILATEVTAMLHGRAAAEEAAETARKTFEEGALAESLPTIEVPRAQMEAGIGVLNAVVLAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            A +  E RR + +NAI++N+  I++++  I   D  + G +KLSFG+K H++  
Sbjct: 361 LAATNGEVRRAIANNAIRVNDETITDDRATIGAGDITAEGVVKLSFGRKKHVLLR 415


>gi|86750115|ref|YP_486611.1| tyrosyl-tRNA synthetase [Rhodopseudomonas palustris HaA2]
 gi|86573143|gb|ABD07700.1| tyrosyl-tRNA synthetase [Rhodopseudomonas palustris HaA2]
          Length = 418

 Score =  520 bits (1339), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 231/418 (55%), Positives = 312/418 (74%), Gaps = 1/418 (0%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M AFKSDF+++L +RGF+HQ+S+P  LD L ++G V AY+GYD TA SLH GHL  +M+L
Sbjct: 1   MTAFKSDFMNVLQQRGFVHQMSDPESLDALAARGEVVAYVGYDCTAPSLHVGHLLSIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            WLQ TG+KPI+LMGGGT+ +GDPS RDE+R+++   +I  N E IKG F+ FIK+G G 
Sbjct: 61  HWLQATGNKPIALMGGGTTRVGDPSGRDETRKILTYDQIDANKESIKGTFAKFIKFGDGA 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           +DALM +N  WL  + YI++LR+IG  FS+NRML+ +SVR RL+REQ LSF+EFNYMILQ
Sbjct: 121 SDALMADNAEWLTKLNYIEMLRDIGRHFSINRMLTMDSVRMRLEREQELSFIEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           +YDFVELA+ Y+C LQMGGSDQWGNI+ G+DLG R+ T +L ALT PLLTT+SG KMGKT
Sbjct: 181 SYDFVELARRYNCNLQMGGSDQWGNIVTGVDLGRRMGTHQLHALTCPLLTTSSGAKMGKT 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
            +GA+WLN +M +PY++WQYWRN +DADV  F K  T LP+ E++R+AKLQG EINEAKK
Sbjct: 241 AAGAVWLNGDMLAPYDYWQYWRNTEDADVGRFLKLFTLLPIDEVERLAKLQGAEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV-KA 359
           ++ATE T ++HGRE AEKA   A   F+    +Q +P+I +++ E+  G+G+L     KA
Sbjct: 301 VLATEATALMHGRETAEKAEATARTTFEQGGTAQDLPSIDVTRAELDAGIGVLAAFAEKA 360

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           G   S  EARR +K+  +++N+ ++++EK+ +   D    G IKLS GKK H++  L 
Sbjct: 361 GLVASNGEARRQIKAGGLRVNDVLVTDEKMTLTPADLTPEGVIKLSMGKKKHVLLRLA 418


>gi|260460867|ref|ZP_05809117.1| tyrosyl-tRNA synthetase [Mesorhizobium opportunistum WSM2075]
 gi|259033444|gb|EEW34705.1| tyrosyl-tRNA synthetase [Mesorhizobium opportunistum WSM2075]
          Length = 417

 Score =  520 bits (1339), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 234/414 (56%), Positives = 313/414 (75%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           MPAFKSDFL  +SERGFIHQ S+   LD L +   VTAYIG+D TA SLHAG L Q+M+L
Sbjct: 1   MPAFKSDFLRTMSERGFIHQTSDDAGLDNLFATETVTAYIGFDATAKSLHAGSLIQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            WLQ+TGH+PI+LMGGGTS+IGDPSF+DE+R+++  Q+I +N+  I+  F  ++K+G+G 
Sbjct: 61  HWLQQTGHRPIALMGGGTSMIGDPSFKDEARKLLTPQDIDDNLVGIRRNFVPYLKFGSGP 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
            DA+M+NN  WL  I Y++ LR++G  FSVNRML+F+SV+ RL REQSLSFLEFNYMILQ
Sbjct: 121 NDAIMVNNADWLMEINYVNFLRDVGRHFSVNRMLAFDSVKLRLDREQSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVEL K   CRLQMGGSDQWGNII GIDLG R++  +L+ALT+PLLTT+SG KMGK+
Sbjct: 181 AYDFVELYKRLGCRLQMGGSDQWGNIINGIDLGRRMEDAQLYALTTPLLTTSSGAKMGKS 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
            SGA+WL+  M SPY FWQYWRN +DADV  F K  TTLP+ E+ R+ +L G EIN+AKK
Sbjct: 241 ASGAVWLDASMLSPYEFWQYWRNTEDADVGRFLKLYTTLPLDEVARLGQLGGSEINDAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           ++ATEIT ++HGR  AE+A+  A + F+    ++ +PT+ +   ++  G+G+L+L+V AG
Sbjct: 301 VLATEITALLHGRAAAEQASDTARKTFEEGALAESLPTVEVENAKLEAGIGILSLLVTAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            A S  EARRH++  A+++N+  +S+E+  + LQD      +KLS G+K HI+ 
Sbjct: 361 LAASNGEARRHVQGGAVRLNDQPVSDERRLVTLQDLSPENVVKLSLGRKKHILV 414


>gi|190891958|ref|YP_001978500.1| tyrosyl-tRNA synthetase [Rhizobium etli CIAT 652]
 gi|190697237|gb|ACE91322.1| tyrosyl-tRNA synthetase protein [Rhizobium etli CIAT 652]
 gi|327191064|gb|EGE58117.1| tyrosyl-tRNA synthetase protein [Rhizobium etli CNPAF512]
          Length = 418

 Score =  519 bits (1336), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 246/413 (59%), Positives = 317/413 (76%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  FKS+FL  L ERGFIHQIS+ R LD L ++  VTAYIGYD TASSLH GHLTQ+M+L
Sbjct: 1   MSEFKSEFLRTLKERGFIHQISDERGLDDLFAKETVTAYIGYDPTASSLHVGHLTQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            WLQ TGH+PISLMGGGT ++GDPSF++E+R++M  + I++NI  IK  FS+++ Y    
Sbjct: 61  HWLQATGHRPISLMGGGTGMVGDPSFKEEARKLMTIETIEQNIASIKRCFSNYLDYDKSG 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
             ALM+NN  WL S+ Y++ LR++G  FSVNRMLSF+SV++RL REQSLSFLEFNYMILQ
Sbjct: 121 NAALMINNAEWLRSLNYLEFLRDVGRHFSVNRMLSFDSVKTRLDREQSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVELAK YDCRLQMGGSDQWGNI+ GIDLG R+ TP+L+ALTSPLLTT+SG KMGK+
Sbjct: 181 AYDFVELAKRYDCRLQMGGSDQWGNIVNGIDLGHRMGTPQLYALTSPLLTTSSGAKMGKS 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
            SGA+WLN ++   Y+FWQYWRN +DADV  F K  TTLPM EI R++ L G E+NE KK
Sbjct: 241 ASGAVWLNADLLPVYDFWQYWRNTEDADVPRFLKLFTTLPMDEIARLSALGGSELNEVKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+ATE+T ++HGR  AE+AA  A + F+    S+++P++ I   E+  G+GLL+L+V+AG
Sbjct: 301 ILATEVTAILHGRAAAEQAAETARKTFEEGGLSENLPSVDIPGTELDGGIGLLSLMVRAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            A S  EARRH++  A++IN+  +S+E+  I   +  + G IKLS GKK HI+
Sbjct: 361 LAGSNGEARRHVQGGAVRINDEAVSDERRLIGSDEITADGVIKLSLGKKKHIL 413


>gi|325293230|ref|YP_004279094.1| Tyrosyl-tRNA synthetase [Agrobacterium sp. H13-3]
 gi|325061083|gb|ADY64774.1| Tyrosyl-tRNA synthetase [Agrobacterium sp. H13-3]
          Length = 417

 Score =  518 bits (1334), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 244/414 (58%), Positives = 318/414 (76%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  FKSDFL  L ERGFIHQIS+   LD L ++  VTAYIGYD TASSLH GHLTQ+M+L
Sbjct: 1   MSRFKSDFLRTLDERGFIHQISDESGLDELFAKETVTAYIGYDPTASSLHVGHLTQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            W+QKTGH+PISLMGGGT ++GDPSF++E+R++M    I++NI  +K +F++++ Y   +
Sbjct: 61  HWMQKTGHQPISLMGGGTGMVGDPSFKEEARKLMTIDMIEDNITSLKHVFANYLDYDRAE 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
             ALM+NN  WL  + Y++ LR++G  FSVNRMLSF+SV++RL REQSLSFLEFNYMILQ
Sbjct: 121 NPALMINNADWLRGLNYLEFLRDVGRHFSVNRMLSFDSVKTRLDREQSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVEL +   CRLQMGGSDQWGNII GIDLG R+ TP+L+ALTSPLLTT+SG KMGK+
Sbjct: 181 AYDFVELNQRTGCRLQMGGSDQWGNIINGIDLGHRMGTPQLYALTSPLLTTSSGAKMGKS 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
            SGA+WLNK++   Y+FWQYWRN +DADVV FAK  TTLPM EI+R+A L G EINEAKK
Sbjct: 241 ASGAVWLNKDLLPVYDFWQYWRNTEDADVVRFAKLFTTLPMDEIERIAALGGSEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+ATE+T ++HGR  AE+AA  A + F+    ++++P+I +   E+  G+G+L+LIV+AG
Sbjct: 301 ILATEVTAILHGRAAAEEAAETARKTFEEGALAENLPSIEVPASELDAGVGVLSLIVRAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            A S  EARRH++  A+KIN+  +S+++  I   +    G IKLS GKK H++ 
Sbjct: 361 LAGSNGEARRHVQGGAVKINDKGVSDDRQMIGSAEITGDGIIKLSVGKKKHVLV 414


>gi|159184939|ref|NP_354812.2| tyrosyl-tRNA synthetase [Agrobacterium tumefaciens str. C58]
 gi|81493394|sp|Q8UED2|SYY_AGRT5 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|159140217|gb|AAK87597.2| tyrosyl-tRNA synthetase [Agrobacterium tumefaciens str. C58]
          Length = 417

 Score =  518 bits (1333), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 245/414 (59%), Positives = 317/414 (76%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  FKSDFL  L ERGFIHQIS+   LD L ++  VTAYIGYD TASSLH GHLTQ+M+L
Sbjct: 1   MSRFKSDFLRTLDERGFIHQISDEAGLDELFAKETVTAYIGYDPTASSLHVGHLTQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            W+QKTGH+PISLMGGGT ++GDPSF++E+R++M    I++NI  +K +F++++ Y   +
Sbjct: 61  HWMQKTGHQPISLMGGGTGMVGDPSFKEEARKLMTIDMIEDNITSLKHVFANYLDYDRAE 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
             ALM+NN  WL  + Y++ LR++G  FSVNRMLSF+SV++RL REQSLSFLEFNYMILQ
Sbjct: 121 NPALMINNADWLRGLNYLEFLRDVGRHFSVNRMLSFDSVKTRLDREQSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVEL +   CRLQMGGSDQWGNII GIDLG R+ TP+L+ALTSPLLTT+SG KMGK+
Sbjct: 181 AYDFVELNQRTGCRLQMGGSDQWGNIINGIDLGHRMGTPQLYALTSPLLTTSSGAKMGKS 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
            SGA+WLNK++   Y+FWQYWRN +DADVV FAK  TTLPM EI R+A L G EINEAKK
Sbjct: 241 ASGAVWLNKDLLPVYDFWQYWRNTEDADVVRFAKLFTTLPMDEIARIATLGGSEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+ATE+T ++HGR  AE+AA  A + F+    ++++P+I +   E+  G+G+L+LIV+AG
Sbjct: 301 ILATEVTAILHGRAAAEEAAETARKTFEEGALAENLPSIEVPTSELDAGVGVLSLIVRAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            A+S  EARRH++  A+KIN   +S+E+  I   +    G IKLS GKK H++ 
Sbjct: 361 LASSNGEARRHVQGGAVKINEQGVSDERQIIGTGEVTGDGVIKLSVGKKKHVLV 414


>gi|239831801|ref|ZP_04680130.1| tyrosyl-tRNA synthetase [Ochrobactrum intermedium LMG 3301]
 gi|239824068|gb|EEQ95636.1| tyrosyl-tRNA synthetase [Ochrobactrum intermedium LMG 3301]
          Length = 417

 Score =  518 bits (1333), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 245/414 (59%), Positives = 318/414 (76%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  FKSDFL  LSERGFIHQIS+   LD L ++  VTAYIG+D TA SLHAG L Q+M+L
Sbjct: 1   MSGFKSDFLRTLSERGFIHQISDESGLDELLAKETVTAYIGFDPTAPSLHAGGLIQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            WLQ+TGH+P++LMGGGT ++GDPSF+DE+R++M    I ENI  IK +F++++ +G G 
Sbjct: 61  HWLQQTGHRPVALMGGGTGMVGDPSFKDEARKLMTEDTIVENIAGIKRVFANYLTFGDGP 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           TDALM+NN  WL +I Y++ LR++G  FSVNRMLSF+SV++RL REQSLSFLEFNYMILQ
Sbjct: 121 TDALMVNNADWLRNINYLEFLRDVGRHFSVNRMLSFDSVKTRLDREQSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVEL K +D RLQMGGSDQWGNII GIDLG R+ TP+L+ALTSPLLTTASG KMGK+
Sbjct: 181 AYDFVELNKRHDIRLQMGGSDQWGNIINGIDLGHRMGTPQLYALTSPLLTTASGQKMGKS 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           L GAIWLN EM S Y+FWQYWRN +DADV  F K  TTLP+ EI ++A L+G EINEAKK
Sbjct: 241 LGGAIWLNAEMLSAYDFWQYWRNTEDADVERFLKLYTTLPLDEIAKLATLEGVEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+ATE+T M+HGR+ AE+AA  A + F+    S+++PT+ + K  ++ G+G+L L+V A 
Sbjct: 301 ILATEVTAMLHGRDAAEEAAETARKTFEDGELSENLPTVGVHKATLNGGIGVLALMVLAE 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
             T+  EARRH++  A++IN+  +S+ ++ +     +  G IKLS GKK H++ 
Sbjct: 361 LCTTNGEARRHVEGGAVRINDEPVSDPRMMVDAGALNDQGVIKLSLGKKRHVLI 414


>gi|225627412|ref|ZP_03785449.1| tyrosyl-tRNA synthetase [Brucella ceti str. Cudo]
 gi|254706868|ref|ZP_05168696.1| tyrosyl-tRNA synthetase [Brucella pinnipedialis M163/99/10]
 gi|254710023|ref|ZP_05171834.1| tyrosyl-tRNA synthetase [Brucella pinnipedialis B2/94]
 gi|254714025|ref|ZP_05175836.1| tyrosyl-tRNA synthetase [Brucella ceti M644/93/1]
 gi|254716917|ref|ZP_05178728.1| tyrosyl-tRNA synthetase [Brucella ceti M13/05/1]
 gi|256031518|ref|ZP_05445132.1| tyrosyl-tRNA synthetase [Brucella pinnipedialis M292/94/1]
 gi|256159648|ref|ZP_05457405.1| tyrosyl-tRNA synthetase [Brucella ceti M490/95/1]
 gi|256254922|ref|ZP_05460458.1| tyrosyl-tRNA synthetase [Brucella ceti B1/94]
 gi|260168650|ref|ZP_05755461.1| tyrosyl-tRNA synthetase [Brucella sp. F5/99]
 gi|261218724|ref|ZP_05933005.1| tyrosyl-tRNA synthetase [Brucella ceti M13/05/1]
 gi|261222104|ref|ZP_05936385.1| tyrosyl-tRNA synthetase [Brucella ceti B1/94]
 gi|261314334|ref|ZP_05953531.1| tyrosyl-tRNA synthetase [Brucella pinnipedialis M163/99/10]
 gi|261317570|ref|ZP_05956767.1| tyrosyl-tRNA synthetase [Brucella pinnipedialis B2/94]
 gi|261321778|ref|ZP_05960975.1| tyrosyl-tRNA synthetase [Brucella ceti M644/93/1]
 gi|261758124|ref|ZP_06001833.1| tyrosyl-tRNA synthetase [Brucella sp. F5/99]
 gi|265988604|ref|ZP_06101161.1| tyrosyl-tRNA synthetase [Brucella pinnipedialis M292/94/1]
 gi|265998069|ref|ZP_06110626.1| tyrosyl-tRNA synthetase [Brucella ceti M490/95/1]
 gi|225617417|gb|EEH14462.1| tyrosyl-tRNA synthetase [Brucella ceti str. Cudo]
 gi|260920688|gb|EEX87341.1| tyrosyl-tRNA synthetase [Brucella ceti B1/94]
 gi|260923813|gb|EEX90381.1| tyrosyl-tRNA synthetase [Brucella ceti M13/05/1]
 gi|261294468|gb|EEX97964.1| tyrosyl-tRNA synthetase [Brucella ceti M644/93/1]
 gi|261296793|gb|EEY00290.1| tyrosyl-tRNA synthetase [Brucella pinnipedialis B2/94]
 gi|261303360|gb|EEY06857.1| tyrosyl-tRNA synthetase [Brucella pinnipedialis M163/99/10]
 gi|261738108|gb|EEY26104.1| tyrosyl-tRNA synthetase [Brucella sp. F5/99]
 gi|262552537|gb|EEZ08527.1| tyrosyl-tRNA synthetase [Brucella ceti M490/95/1]
 gi|264660801|gb|EEZ31062.1| tyrosyl-tRNA synthetase [Brucella pinnipedialis M292/94/1]
          Length = 417

 Score =  515 bits (1327), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 243/414 (58%), Positives = 316/414 (76%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  FKSDFL  LSERGFIHQIS+   LD L ++  VTAYIG+D TA SLHAG L Q+M+L
Sbjct: 1   MSGFKSDFLRTLSERGFIHQISDESGLDELLAKETVTAYIGFDPTAPSLHAGGLIQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
           +WLQ+TGHKP++LMGGGT ++GDPSF+DE+R++M    I EN+  IK +F++++ +G G 
Sbjct: 61  YWLQQTGHKPVALMGGGTGMVGDPSFKDEARKLMTEDTIAENMASIKRVFANYLTFGDGA 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
            DALM+NN  WL +I Y++ LR++G  FSVNRMLSF+SV+ RL REQSLSFLEFNYMILQ
Sbjct: 121 NDALMVNNGEWLRNINYLEFLRDVGRHFSVNRMLSFDSVKLRLDREQSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVEL K Y  RLQMGGSDQWGNI+ GIDLG R+ TP+L+ALTSPLLTTASG KMGK+
Sbjct: 181 AYDFVELNKRYGLRLQMGGSDQWGNIVNGIDLGHRMGTPQLYALTSPLLTTASGQKMGKS 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           L GAIWLN +M S Y+FWQYWRN +DADV  F K  TTLP+ EI R+A+L G EINEAKK
Sbjct: 241 LGGAIWLNADMLSAYDFWQYWRNTEDADVERFLKLYTTLPLDEIARLAELDGAEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+ATE+T M+HGR+ AE+AA  A + F+    S+++PT+ + K  ++ G+G+L L+V A 
Sbjct: 301 ILATEVTAMLHGRDAAEEAAETARKTFEDGELSENLPTVGVHKATLNDGIGVLALMVLAE 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
             T+  EARRH++  A++IN+  +S+ ++ +     +  G IKLS GKK H++ 
Sbjct: 361 LCTTNGEARRHVEGGAVRINDEPVSDPRMVVNAAALNDQGLIKLSLGKKRHVLI 414


>gi|254719024|ref|ZP_05180835.1| tyrosyl-tRNA synthetase [Brucella sp. 83/13]
 gi|265984014|ref|ZP_06096749.1| tyrosyl-tRNA synthetase [Brucella sp. 83/13]
 gi|306840088|ref|ZP_07472874.1| tyrosyl-tRNA synthetase [Brucella sp. NF 2653]
 gi|264662606|gb|EEZ32867.1| tyrosyl-tRNA synthetase [Brucella sp. 83/13]
 gi|306404816|gb|EFM61109.1| tyrosyl-tRNA synthetase [Brucella sp. NF 2653]
          Length = 417

 Score =  515 bits (1326), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 243/414 (58%), Positives = 316/414 (76%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  FKSDFL  LSERGFIHQIS+   LD L ++  VTAYIG+D TA SLHAG L Q+M+L
Sbjct: 1   MSGFKSDFLRTLSERGFIHQISDESGLDKLLAKETVTAYIGFDPTAPSLHAGGLIQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
           +WLQ+TGHKP++LMGGGT ++GDPSF+DE+R++M    I EN+  IK +F++++ +G G 
Sbjct: 61  YWLQQTGHKPVALMGGGTGMVGDPSFKDEARKLMTEDTIAENMASIKRVFANYLTFGDGA 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
            DALM+NN  WL +I Y++ LR++G  FSVNRMLSF+SV+ RL REQSLSFLEFNYMILQ
Sbjct: 121 NDALMVNNGEWLRNINYLEFLRDVGRHFSVNRMLSFDSVKLRLDREQSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVEL K Y  RLQMGGSDQWGNI+ GIDLG R+ TP+L+ALTSPLLTTASG KMGK+
Sbjct: 181 AYDFVELNKRYGLRLQMGGSDQWGNIVNGIDLGHRMGTPQLYALTSPLLTTASGQKMGKS 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           L GAIWLN +M S Y+FWQYWRN +DADV  F K  TTLP+ EI R+A+L G EINEAKK
Sbjct: 241 LGGAIWLNADMLSAYDFWQYWRNTEDADVERFLKLYTTLPLDEIARLAELGGAEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+ATE+T M+HGR+ AE+AA  A + F+    S+++PT+ + K  ++ G+G+L L+V A 
Sbjct: 301 ILATEVTAMLHGRDAAEEAAETARKTFEDGELSENLPTVGVHKATLNDGIGVLALMVLAE 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
             T+  EARRH++  A++IN+  +S+ ++ +     +  G IKLS GKK H++ 
Sbjct: 361 LCTTNGEARRHVEGGAVRINDEPVSDPRMVVNAAALNDQGLIKLSLGKKRHVLI 414


>gi|23501810|ref|NP_697937.1| tyrosyl-tRNA synthetase [Brucella suis 1330]
 gi|161618882|ref|YP_001592769.1| tyrosyl-tRNA synthetase [Brucella canis ATCC 23365]
 gi|254701686|ref|ZP_05163514.1| tyrosyl-tRNA synthetase [Brucella suis bv. 5 str. 513]
 gi|254704230|ref|ZP_05166058.1| tyrosyl-tRNA synthetase [Brucella suis bv. 3 str. 686]
 gi|260566523|ref|ZP_05836993.1| tyrosyl-tRNA synthetase [Brucella suis bv. 4 str. 40]
 gi|261752237|ref|ZP_05995946.1| tyrosyl-tRNA synthetase [Brucella suis bv. 5 str. 513]
 gi|261754896|ref|ZP_05998605.1| tyrosyl-tRNA synthetase [Brucella suis bv. 3 str. 686]
 gi|81752714|sp|Q8G105|SYY_BRUSU RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|23347743|gb|AAN29852.1| tyrosyl-tRNA synthetase [Brucella suis 1330]
 gi|161335693|gb|ABX61998.1| Tyrosyl-tRNA synthetase [Brucella canis ATCC 23365]
 gi|260156041|gb|EEW91121.1| tyrosyl-tRNA synthetase [Brucella suis bv. 4 str. 40]
 gi|261741990|gb|EEY29916.1| tyrosyl-tRNA synthetase [Brucella suis bv. 5 str. 513]
 gi|261744649|gb|EEY32575.1| tyrosyl-tRNA synthetase [Brucella suis bv. 3 str. 686]
          Length = 417

 Score =  514 bits (1325), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 243/414 (58%), Positives = 316/414 (76%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  FKSDFL  LSERGFIHQIS+   LD L ++  VTAYIG+D TA SLHAG L Q+M+L
Sbjct: 1   MSGFKSDFLRTLSERGFIHQISDESGLDELLAKETVTAYIGFDPTAPSLHAGGLIQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
           +WLQ+TGHKP++LMGGGT ++GDPSF+DE+R++M    I EN+  IK +F++++ +G G 
Sbjct: 61  YWLQQTGHKPVALMGGGTGMVGDPSFKDEARKLMTEDTIAENMASIKRVFANYLTFGDGA 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
            DALM+NN  WL +I Y++ LR++G  FSVNRMLSF+SV+ RL REQSLSFLEFNYMILQ
Sbjct: 121 NDALMVNNGEWLRNINYLEFLRDVGRHFSVNRMLSFDSVKLRLDREQSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVEL K Y  RLQMGGSDQWGNI+ GIDLG R+ TP+L+ALTSPLLTTASG KMGK+
Sbjct: 181 AYDFVELNKRYGLRLQMGGSDQWGNIVNGIDLGHRMGTPQLYALTSPLLTTASGQKMGKS 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           L GAIWLN +M S Y+FWQYWRN +DADV  F K  TTLP+ EI R+A+L G EINEAKK
Sbjct: 241 LGGAIWLNADMLSAYDFWQYWRNTEDADVERFLKLYTTLPLDEIARLAELGGAEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+ATE+T M+HGR+ AE+AA  A + F+    S+++PT+ + K  ++ G+G+L L+V A 
Sbjct: 301 ILATEVTAMLHGRDAAEEAAETARKTFEDGELSENLPTVGVHKATLNDGIGVLALMVLAE 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
             T+  EARRH++  A++IN+  +S+ ++ +     +  G IKLS GKK H++ 
Sbjct: 361 LCTTNGEARRHVEGGAVRINDEPVSDPRMVVNAAALNGQGLIKLSLGKKRHVLI 414


>gi|17987330|ref|NP_539964.1| tyrosyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
 gi|62289867|ref|YP_221660.1| tyrosyl-tRNA synthetase [Brucella abortus bv. 1 str. 9-941]
 gi|82699794|ref|YP_414368.1| tyrosyl-tRNA synthetase [Brucella melitensis biovar Abortus 2308]
 gi|148560522|ref|YP_001258899.1| tyrosyl-tRNA synthetase [Brucella ovis ATCC 25840]
 gi|189024109|ref|YP_001934877.1| tyrosyl-tRNA synthetase [Brucella abortus S19]
 gi|237815361|ref|ZP_04594359.1| tyrosyl-tRNA synthetase [Brucella abortus str. 2308 A]
 gi|254689170|ref|ZP_05152424.1| tyrosyl-tRNA synthetase [Brucella abortus bv. 6 str. 870]
 gi|254697305|ref|ZP_05159133.1| tyrosyl-tRNA synthetase [Brucella abortus bv. 2 str. 86/8/59]
 gi|254730203|ref|ZP_05188781.1| tyrosyl-tRNA synthetase [Brucella abortus bv. 4 str. 292]
 gi|256044594|ref|ZP_05447498.1| tyrosyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1]
 gi|256369352|ref|YP_003106860.1| tyrosyl-tRNA synthetase [Brucella microti CCM 4915]
 gi|260545389|ref|ZP_05821130.1| tyrosyl-tRNA synthetase [Brucella abortus NCTC 8038]
 gi|260563946|ref|ZP_05834432.1| tyrosyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
 gi|260754669|ref|ZP_05867017.1| tyrosyl-tRNA synthetase [Brucella abortus bv. 6 str. 870]
 gi|260757892|ref|ZP_05870240.1| tyrosyl-tRNA synthetase [Brucella abortus bv. 4 str. 292]
 gi|260761715|ref|ZP_05874058.1| tyrosyl-tRNA synthetase [Brucella abortus bv. 2 str. 86/8/59]
 gi|265991018|ref|ZP_06103575.1| tyrosyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1]
 gi|294852280|ref|ZP_06792953.1| tyrosyl-tRNA synthetase [Brucella sp. NVSL 07-0026]
 gi|306840439|ref|ZP_07473199.1| tyrosyl-tRNA synthetase [Brucella sp. BO2]
 gi|306843821|ref|ZP_07476419.1| tyrosyl-tRNA synthetase [Brucella sp. BO1]
 gi|75496888|sp|Q57DI5|SYY_BRUAB RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|81851813|sp|Q8YGV8|SYY_BRUME RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|97197584|sp|Q2YNR0|SYY_BRUA2 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|17983012|gb|AAL52228.1| tyrosyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
 gi|62195999|gb|AAX74299.1| TyrS, tyrosyl-tRNA synthetase [Brucella abortus bv. 1 str. 9-941]
 gi|82615895|emb|CAJ10899.1| Aminoacyl-tRNA synthetase, class I:Aminoacyl-tRNA synthetase, class
           Ib:Tyrosyl-tRNA synthetase, class Ib:RNA-binding S4
           [Brucella melitensis biovar Abortus 2308]
 gi|148371779|gb|ABQ61758.1| tyrosyl-tRNA synthetase [Brucella ovis ATCC 25840]
 gi|189019681|gb|ACD72403.1| tyrosyl-tRNA synthetase [Brucella abortus S19]
 gi|237790198|gb|EEP64408.1| tyrosyl-tRNA synthetase [Brucella abortus str. 2308 A]
 gi|255999512|gb|ACU47911.1| tyrosyl-tRNA synthetase [Brucella microti CCM 4915]
 gi|260096796|gb|EEW80671.1| tyrosyl-tRNA synthetase [Brucella abortus NCTC 8038]
 gi|260153962|gb|EEW89054.1| tyrosyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
 gi|260668210|gb|EEX55150.1| tyrosyl-tRNA synthetase [Brucella abortus bv. 4 str. 292]
 gi|260672147|gb|EEX58968.1| tyrosyl-tRNA synthetase [Brucella abortus bv. 2 str. 86/8/59]
 gi|260674777|gb|EEX61598.1| tyrosyl-tRNA synthetase [Brucella abortus bv. 6 str. 870]
 gi|263001802|gb|EEZ14377.1| tyrosyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1]
 gi|294820869|gb|EFG37868.1| tyrosyl-tRNA synthetase [Brucella sp. NVSL 07-0026]
 gi|306275899|gb|EFM57615.1| tyrosyl-tRNA synthetase [Brucella sp. BO1]
 gi|306289573|gb|EFM60788.1| tyrosyl-tRNA synthetase [Brucella sp. BO2]
          Length = 417

 Score =  514 bits (1325), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 243/414 (58%), Positives = 316/414 (76%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  FKSDFL  LSERGFIHQIS+   LD L ++  VTAYIG+D TA SLHAG L Q+M+L
Sbjct: 1   MSGFKSDFLRTLSERGFIHQISDESGLDELLAKETVTAYIGFDPTAPSLHAGGLIQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
           +WLQ+TGHKP++LMGGGT ++GDPSF+DE+R++M    I EN+  IK +F++++ +G G 
Sbjct: 61  YWLQQTGHKPVALMGGGTGMVGDPSFKDEARKLMTEDTIAENMASIKRVFANYLTFGDGA 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
            DALM+NN  WL +I Y++ LR++G  FSVNRMLSF+SV+ RL REQSLSFLEFNYMILQ
Sbjct: 121 NDALMVNNGEWLRNINYLEFLRDVGRHFSVNRMLSFDSVKLRLDREQSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVEL K Y  RLQMGGSDQWGNI+ GIDLG R+ TP+L+ALTSPLLTTASG KMGK+
Sbjct: 181 AYDFVELNKRYGLRLQMGGSDQWGNIVNGIDLGHRMGTPQLYALTSPLLTTASGQKMGKS 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           L GAIWLN +M S Y+FWQYWRN +DADV  F K  TTLP+ EI R+A+L G EINEAKK
Sbjct: 241 LGGAIWLNADMLSAYDFWQYWRNTEDADVERFLKLYTTLPLDEIARLAELGGAEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+ATE+T M+HGR+ AE+AA  A + F+    S+++PT+ + K  ++ G+G+L L+V A 
Sbjct: 301 ILATEVTAMLHGRDAAEEAAETARKTFEDGELSENLPTVGVHKATLNDGIGVLALMVLAE 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
             T+  EARRH++  A++IN+  +S+ ++ +     +  G IKLS GKK H++ 
Sbjct: 361 LCTTNGEARRHVEGGAVRINDEPVSDPRMVVNAAALNDQGLIKLSLGKKRHVLI 414


>gi|163843195|ref|YP_001627599.1| tyrosyl-tRNA synthetase [Brucella suis ATCC 23445]
 gi|163673918|gb|ABY38029.1| tyrosyl-tRNA synthetase [Brucella suis ATCC 23445]
          Length = 417

 Score =  514 bits (1325), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 243/414 (58%), Positives = 316/414 (76%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  FKSDFL  LSERGFIHQIS+   LD L ++  VTAYIG+D TA SLHAG L Q+M+L
Sbjct: 1   MSGFKSDFLRTLSERGFIHQISDESGLDELLAKETVTAYIGFDPTAPSLHAGGLIQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
           +WLQ+TGHKP++LMGGGT ++GDPSF+DE+R++M    I EN+  IK +F++++ +G G 
Sbjct: 61  YWLQQTGHKPVALMGGGTGMVGDPSFKDEARKLMTEDTIAENMASIKRVFANYLTFGDGA 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
            DALM+NN  WL +I Y++ LR++G  FSVNRMLSF+SV+ RL REQSLSFLEFNYMILQ
Sbjct: 121 NDALMVNNGGWLRNINYLEFLRDVGRHFSVNRMLSFDSVKLRLDREQSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVEL K Y  RLQMGGSDQWGNI+ GIDLG R+ TP+L+ALTSPLLTTASG KMGK+
Sbjct: 181 AYDFVELNKRYGLRLQMGGSDQWGNIVNGIDLGHRMGTPQLYALTSPLLTTASGQKMGKS 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           L GAIWLN +M S Y+FWQYWRN +DADV  F K  TTLP+ EI R+A+L G EINEAKK
Sbjct: 241 LGGAIWLNADMLSAYDFWQYWRNTEDADVERFLKLYTTLPLDEIARLAELGGAEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+ATE+T M+HGR+ AE+AA  A + F+    S+++PT+ + K  ++ G+G+L L+V A 
Sbjct: 301 ILATEVTAMLHGRDAAEEAAETARKTFEDGELSENLPTVGVHKATLNDGIGVLALMVLAE 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
             T+  EARRH++  A++IN+  +S+ ++ +     +  G IKLS GKK H++ 
Sbjct: 361 LCTTNGEARRHVEGGAVRINDEPVSDPRMVVNAAALNGQGLIKLSLGKKRHVLI 414


>gi|256061027|ref|ZP_05451183.1| tyrosyl-tRNA synthetase [Brucella neotomae 5K33]
 gi|261325026|ref|ZP_05964223.1| tyrosyl-tRNA synthetase [Brucella neotomae 5K33]
 gi|261301006|gb|EEY04503.1| tyrosyl-tRNA synthetase [Brucella neotomae 5K33]
          Length = 417

 Score =  514 bits (1325), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 243/414 (58%), Positives = 316/414 (76%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  FKSDFL  LSERGFIHQIS+   LD L ++  VTAYIG+D TA SLHAG L Q+M+L
Sbjct: 1   MSGFKSDFLRTLSERGFIHQISDESGLDELLAKETVTAYIGFDPTAPSLHAGGLIQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
           +WLQ+TGHKP++LMGGGT ++GDPSF+DE+R++M    I EN+  IK +F++++ +G G 
Sbjct: 61  YWLQQTGHKPVALMGGGTGMVGDPSFKDEARKLMTEDTIAENMASIKRVFANYLTFGDGA 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
            DALM+NN  WL +I Y++ LR++G  FSVNRMLSF+SV+ RL REQSLSFLEFNYMILQ
Sbjct: 121 NDALMVNNGEWLRNINYLEFLRDVGRHFSVNRMLSFDSVKLRLDREQSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVEL K Y  RLQMGGSDQWGNI+ GIDLG R+ TP+L+ALTSPLLTTASG KMGK+
Sbjct: 181 AYDFVELNKRYGLRLQMGGSDQWGNIVNGIDLGHRMGTPQLYALTSPLLTTASGQKMGKS 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           L GAIWLN +M S Y+FWQYWRN +DADV  F K  TTLP+ EI R+A+L G EINEAKK
Sbjct: 241 LGGAIWLNADMLSAYDFWQYWRNTEDADVERFLKLYTTLPLDEIARLAELGGAEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+ATE+T M+HGR+ AE+AA  A + F+    S+++PT+ + K  ++ G+G+L L+V A 
Sbjct: 301 ILATEVTAMLHGRDAAEEAAETARKTFEDGGLSENLPTVGVHKATLNDGIGVLALMVLAE 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
             T+  EARRH++  A++IN+  +S+ ++ +     +  G IKLS GKK H++ 
Sbjct: 361 LCTTNGEARRHVEGGAVRINDEPVSDPRMVVNAAALNDQGLIKLSLGKKRHVLI 414


>gi|225852437|ref|YP_002732670.1| tyrosyl-tRNA synthetase [Brucella melitensis ATCC 23457]
 gi|256264069|ref|ZP_05466601.1| tyrosyl-tRNA synthetase [Brucella melitensis bv. 2 str. 63/9]
 gi|225640802|gb|ACO00716.1| tyrosyl-tRNA synthetase [Brucella melitensis ATCC 23457]
 gi|263094264|gb|EEZ18134.1| tyrosyl-tRNA synthetase [Brucella melitensis bv. 2 str. 63/9]
 gi|326408951|gb|ADZ66016.1| tyrosyl-tRNA synthetase [Brucella melitensis M28]
 gi|326538665|gb|ADZ86880.1| tyrosyl-tRNA synthetase [Brucella melitensis M5-90]
          Length = 417

 Score =  514 bits (1325), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 243/414 (58%), Positives = 316/414 (76%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  FKSDFL  LSERGFIHQIS+   LD L ++  VTAYIG+D TA SLHAG L Q+M+L
Sbjct: 1   MSGFKSDFLRTLSERGFIHQISDESGLDELLAKETVTAYIGFDPTAPSLHAGGLIQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
           +WLQ+TGHKP++LMGGGT ++GDPSF+DE+R++M    I EN+  IK +F++++ +G G 
Sbjct: 61  YWLQQTGHKPVALMGGGTGMVGDPSFKDEARKLMTEDTIAENMASIKRVFANYLTFGDGA 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
            DALM+NN  WL +I Y++ LR++G  FSVNRMLSF+SV+ RL REQSLSFLEFNYMILQ
Sbjct: 121 NDALMVNNGEWLRNINYLEFLRDVGRHFSVNRMLSFDSVKLRLDREQSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVEL K Y  RLQMGGSDQWGNI+ GIDLG R+ TP+L+ALTSPLLTTASG KMGK+
Sbjct: 181 AYDFVELNKRYGLRLQMGGSDQWGNIVNGIDLGHRMGTPQLYALTSPLLTTASGQKMGKS 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           L GAIWLN +M S Y+FWQYWRN +DADV  F K  TTLP+ EI R+A+L G EINEAKK
Sbjct: 241 LGGAIWLNADMLSAYDFWQYWRNAEDADVERFLKLYTTLPLDEIARLAELGGAEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+ATE+T M+HGR+ AE+AA  A + F+    S+++PT+ + K  ++ G+G+L L+V A 
Sbjct: 301 ILATEVTAMLHGRDAAEEAAETARKTFEDGELSENLPTVGVHKATLNDGIGVLALMVLAE 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
             T+  EARRH++  A++IN+  +S+ ++ +     +  G IKLS GKK H++ 
Sbjct: 361 LCTTNGEARRHVEGGAVRINDEPVSDPRMVVNAAALNDQGLIKLSLGKKRHVLI 414


>gi|256257420|ref|ZP_05462956.1| tyrosyl-tRNA synthetase [Brucella abortus bv. 9 str. C68]
 gi|260883695|ref|ZP_05895309.1| tyrosyl-tRNA synthetase [Brucella abortus bv. 9 str. C68]
 gi|297248269|ref|ZP_06931987.1| tyrosyl-tRNA synthetase [Brucella abortus bv. 5 str. B3196]
 gi|260873223|gb|EEX80292.1| tyrosyl-tRNA synthetase [Brucella abortus bv. 9 str. C68]
 gi|297175438|gb|EFH34785.1| tyrosyl-tRNA synthetase [Brucella abortus bv. 5 str. B3196]
          Length = 417

 Score =  514 bits (1324), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 242/414 (58%), Positives = 316/414 (76%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  FKSDFL  LSERGFIHQIS+   LD L ++  VTAYIG+D TA SLHAG L Q+M+L
Sbjct: 1   MSGFKSDFLRTLSERGFIHQISDESGLDELLAKETVTAYIGFDPTAPSLHAGGLIQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
           +WLQ+TGHKP++LMGGGT ++GDPSF+DE+R++M    I EN+  IK +F++++ +G G 
Sbjct: 61  YWLQQTGHKPVALMGGGTGMVGDPSFKDEARKLMTEDTIAENMASIKRVFANYLTFGDGA 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
            DALM+NN  WL +I Y++ LR++G  FSVNRMLSF+SV+ RL REQSLSFLEFNYMILQ
Sbjct: 121 NDALMVNNGEWLRNINYLEFLRDVGRHFSVNRMLSFDSVKLRLDREQSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVEL K Y  RLQMGGSDQWGNI+ GIDLG R+ TP+L+ALTSPLLTTASG KMGK+
Sbjct: 181 AYDFVELNKRYGLRLQMGGSDQWGNIVNGIDLGHRMGTPQLYALTSPLLTTASGQKMGKS 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           L GAIWLN +M S Y+FWQYWRN +DADV  F K  TTLP+ EI R+A+L G EINEAKK
Sbjct: 241 LGGAIWLNADMLSAYDFWQYWRNTEDADVERFLKLYTTLPLDEIARLAELGGAEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+ATE+T M+HGR+ AE+AA  A + F+    S+++PT+ + K  ++ G+G+L L+V A 
Sbjct: 301 ILATEVTAMLHGRDAAEEAAETARKTFEDGELSENLPTVGVHKATLNDGIGVLALMVLAE 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
             T+  EARRH++  A+++N+  +S+ ++ +     +  G IKLS GKK H++ 
Sbjct: 361 LCTTNGEARRHVEGGAVRVNDEPVSDPRMVVNAAALNDQGLIKLSLGKKRHVLI 414


>gi|299133781|ref|ZP_07026975.1| tyrosyl-tRNA synthetase [Afipia sp. 1NLS2]
 gi|298591617|gb|EFI51818.1| tyrosyl-tRNA synthetase [Afipia sp. 1NLS2]
          Length = 417

 Score =  514 bits (1323), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 232/413 (56%), Positives = 307/413 (74%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M A+KSDFL++L +RG IHQIS+P  LD  C++G +TAY+GYD TA+SLH G+L  + +L
Sbjct: 1   MTAYKSDFLNVLEQRGLIHQISDPAALDDACTKGPITAYVGYDATATSLHIGNLISVTML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
           +WLQ+TGH+PI+LMGGGTS++GDPSFRDE R+++    I  NIE IK IF   ++YG G 
Sbjct: 61  YWLQQTGHRPITLMGGGTSMVGDPSFRDEQRKLLDEATIASNIEGIKKIFGRILRYGEGA 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           TDALM+NN  WL  + Y+  LR++G +FSVNRMLSF+SV+ RL REQSLSFLEFNYMI+Q
Sbjct: 121 TDALMINNAEWLLKLNYVSFLRDVGRYFSVNRMLSFDSVKLRLDREQSLSFLEFNYMIMQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
            YDFVE+ + Y C LQMGGSDQWGNII G+DL  R+  P+L+ALT+PLLTT+SG KMGKT
Sbjct: 181 GYDFVEINRRYGCILQMGGSDQWGNIINGVDLSHRMGGPQLYALTTPLLTTSSGAKMGKT 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
             GA+WLN ++ SPY+FWQY+RN +DADV  F K  T LP++EI R+ KL G EINEAKK
Sbjct: 241 AKGAVWLNGDVFSPYDFWQYFRNTEDADVGRFLKVFTRLPLNEIARLEKLGGAEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+ATE T +VHGR  A++AA  A   F+    +Q++PT+ IS+ E+  G  +L L VKAG
Sbjct: 301 ILATEATAVVHGRVAADEAAETARRTFEEGAIAQNLPTLEISRGELESGASVLALFVKAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
              S  EARR +K   I++N++ ++++K+ +        G IKLS GKK H++
Sbjct: 361 LVASNGEARRQIKGGGIRVNDTPVTDDKMLLTPDVLTPEGVIKLSLGKKRHVL 413


>gi|114704656|ref|ZP_01437564.1| tyrosyl-tRNA synthetase [Fulvimarina pelagi HTCC2506]
 gi|114539441|gb|EAU42561.1| tyrosyl-tRNA synthetase [Fulvimarina pelagi HTCC2506]
          Length = 416

 Score =  514 bits (1323), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 242/414 (58%), Positives = 310/414 (74%), Gaps = 1/414 (0%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  F+SDFL  LSERGFIHQ S+   LD L     VT YIG+D TA SLH G L Q+M+L
Sbjct: 1   MSGFRSDFLHALSERGFIHQTSDDTRLDDLFRTETVTGYIGFDPTAKSLHVGSLIQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            W+QKTGHKPI+LMGGGT +IGDPSF+DE+R++  S+ I+EN+  I+  F +++  G G+
Sbjct: 61  HWMQKTGHKPIALMGGGTGMIGDPSFKDEARKLQTSETIEENLAGIRRGFENYLTMGDGQ 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           TDA+M+NN  WL  I Y+  LR++G  FSVNRMLSFESV+ RL REQSLSFLEFNYMILQ
Sbjct: 121 TDAVMVNNADWLLDINYVAFLRDVGRHFSVNRMLSFESVKLRLDREQSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVEL K Y CRLQMGGSDQWGNI+ GIDLG R++  +LFALTSPLLTT+SG KMGKT
Sbjct: 181 AYDFVELYKRYGCRLQMGGSDQWGNIVNGIDLGRRMEGAELFALTSPLLTTSSGAKMGKT 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
             GA+WLN +M SPY+FWQYWRN +DADV  F K  T +PM EI R+A L G EIN+AKK
Sbjct: 241 ADGAVWLNPDMKSPYDFWQYWRNTEDADVERFLKLYTVMPMDEIARLANLGGSEINDAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
            +ATE+T M+HGRE A+ AA  A + F+  I S+++P+I++   E+  G GLL+++V AG
Sbjct: 301 TLATEVTAMLHGREAADAAAETARQTFEEGIASENLPSIAVPSAELETGTGLLSVLVAAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            A S  EARRH+K  A+K+N+  +S+E++Q+ ++     G+IKLS G+K H + 
Sbjct: 361 LAGSNGEARRHIKGGAVKVNDETVSDERMQLDMK-LTRDGSIKLSVGRKKHALV 413


>gi|222148510|ref|YP_002549467.1| tyrosyl-tRNA synthetase [Agrobacterium vitis S4]
 gi|221735496|gb|ACM36459.1| tyrosyl-tRNA synthetase [Agrobacterium vitis S4]
          Length = 418

 Score =  512 bits (1318), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 246/415 (59%), Positives = 313/415 (75%), Gaps = 1/415 (0%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  FKSDFL  + ERGFIHQIS+   LD L S+  VTAYIGYD TASSLHAG L Q+M+L
Sbjct: 1   MSKFKSDFLRTMHERGFIHQISDETGLDDLLSKETVTAYIGYDPTASSLHAGSLIQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG- 119
            W Q TGH+PISLMGGGT ++GDPSF++E+R++M   +I++NI  IK  F+ ++ Y  G 
Sbjct: 61  HWFQATGHQPISLMGGGTGMVGDPSFKEEARQLMTVDKIEDNIASIKRCFAHYLDYDNGP 120

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
           K  ALMLNN  WL  + Y++ LR++G  FSVNRMLSF+SV++RL REQSLSFLEFNYMIL
Sbjct: 121 KGGALMLNNAEWLRGLNYLEFLRDVGRHFSVNRMLSFDSVKTRLDREQSLSFLEFNYMIL 180

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK 239
           QAYD+VEL K Y CRLQMGGSDQWGNII GIDLG R+ TP+L+ALTSPLLTT+SG KMGK
Sbjct: 181 QAYDYVELNKRYGCRLQMGGSDQWGNIINGIDLGHRMGTPQLYALTSPLLTTSSGAKMGK 240

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAK 299
           + +GA+WLN ++ S Y+FWQYWRN +DADV  F K  TTLPM EI +++ L G EINE K
Sbjct: 241 SATGAVWLNADLLSAYDFWQYWRNTEDADVSRFLKLYTTLPMDEIAKLSALGGAEINEVK 300

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKA 359
           KI+ATEIT ++HGR  AE+AA  A + F+    + ++P+I ++  E+  G+GLL LIVKA
Sbjct: 301 KILATEITAILHGRAAAEEAAETARKTFEEGALADNLPSIEVASAELESGIGLLALIVKA 360

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           G A S  EARRH++  A+KIN+  +S+E++ I   +  + G IKLS GKK HI+ 
Sbjct: 361 GLAASNGEARRHVQGGAVKINDQSVSDERMSIGAGEVTADGVIKLSLGKKKHILV 415


>gi|256113474|ref|ZP_05454308.1| tyrosyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether]
 gi|265994855|ref|ZP_06107412.1| tyrosyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether]
 gi|262765968|gb|EEZ11757.1| tyrosyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether]
          Length = 417

 Score =  511 bits (1316), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 242/414 (58%), Positives = 315/414 (76%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  FKSDFL  LSERGFIHQIS+   LD L ++  VTAYIG+D TA SLHAG L Q+M+L
Sbjct: 1   MSGFKSDFLRTLSERGFIHQISDESGLDELLAKETVTAYIGFDPTAPSLHAGGLIQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
           +WLQ+TGHKP++LMGGGT ++GDPSF+DE+R++M    I EN+  IK +F++++ +G G 
Sbjct: 61  YWLQQTGHKPVALMGGGTGMVGDPSFKDEARKLMTEDTIAENMASIKRVFANYLTFGDGA 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
            DALM+NN  WL +I Y++ LR++G  FSVNRMLSF+SV+ RL REQSLSFLEFNYMILQ
Sbjct: 121 NDALMVNNGEWLRNINYLEFLRDVGRHFSVNRMLSFDSVKLRLDREQSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVEL K Y  RLQMGGSDQWGNI+ GIDLG R+ T +L+ALTSPLLTTASG KMGK+
Sbjct: 181 AYDFVELNKRYGLRLQMGGSDQWGNIVNGIDLGHRMGTQQLYALTSPLLTTASGQKMGKS 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           L GAIWLN +M S Y+FWQYWRN +DADV  F K  TTLP+ EI R+A+L G EINEAKK
Sbjct: 241 LGGAIWLNADMLSAYDFWQYWRNTEDADVERFLKLYTTLPLDEIARLAELGGAEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+ATE+T M+HGR+ AE+AA  A + F+    S+++PT+ + K  ++ G+G+L L+V A 
Sbjct: 301 ILATEVTAMLHGRDAAEEAAETARKTFEDGELSENLPTVGVHKATLNDGIGVLALMVLAE 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
             T+  EARRH++  A++IN+  +S+ ++ +     +  G IKLS GKK H++ 
Sbjct: 361 LCTTNGEARRHVEGGAVRINDEPVSDPRMVVNAAALNDQGLIKLSLGKKRHVLI 414


>gi|304391532|ref|ZP_07373474.1| tyrosyl-tRNA synthetase [Ahrensia sp. R2A130]
 gi|303295761|gb|EFL90119.1| tyrosyl-tRNA synthetase [Ahrensia sp. R2A130]
          Length = 416

 Score =  509 bits (1311), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 231/413 (55%), Positives = 309/413 (74%), Gaps = 1/413 (0%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  FKSDFL+ L ERGFIHQIS+   LD L ++ VVTAYIG+D TA SLH G +TQ+MLL
Sbjct: 1   MSRFKSDFLATLDERGFIHQISDETGLDDLLTKEVVTAYIGFDATAKSLHVGSMTQIMLL 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            W Q+TGH+P++LMGGGT+++GDPS +DESR+MM ++ I +N   I+  F  F+ +G GK
Sbjct: 61  HWFQQTGHRPVALMGGGTTMVGDPSGKDESRQMMTAEIIADNKTSIQKCFDPFLTFGDGK 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
            DA+M +N  WL  + Y++ LR+ G   SVN ML+ +SV++RL REQ LSFLEFNYM LQ
Sbjct: 121 NDAIMADNADWLLDLNYVEFLRDYGKHLSVNAMLARDSVKTRLDREQHLSFLEFNYMCLQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYD+VEL++ YDCRLQ+GGSDQWGNI+ G+DLG R  TP+L+ALTSPLLTT+SG KMGK+
Sbjct: 181 AYDYVELSRRYDCRLQIGGSDQWGNILSGVDLGRRSGTPQLYALTSPLLTTSSGAKMGKS 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
            SGA+W+N++M   ++FWQYWRN +DADV  F K  TTLPM EI R++ L+G E+N+AKK
Sbjct: 241 ASGAVWMNEDMLPVFDFWQYWRNTEDADVPRFLKLFTTLPMDEIARLSALEGNELNDAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           ++ATE T MVHGR+ AEKAA  A + F+    S  +PTIS+   +   G G+L L+V AG
Sbjct: 301 VLATETTAMVHGRDAAEKAAETARQTFEQGTVSADLPTISVPAGDFEAGTGILGLLVTAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            A S  EARRH+K  A+K+N+  +S+E++ +  + F + G +KLSFGKK H++
Sbjct: 361 LAGSNGEARRHIKGGAVKVNDQAVSDERMMLD-KSFLTDGAVKLSFGKKRHVL 412


>gi|90424342|ref|YP_532712.1| tyrosyl-tRNA synthetase [Rhodopseudomonas palustris BisB18]
 gi|90106356|gb|ABD88393.1| tyrosyl-tRNA synthetase [Rhodopseudomonas palustris BisB18]
          Length = 418

 Score =  509 bits (1311), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 226/414 (54%), Positives = 308/414 (74%), Gaps = 1/414 (0%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M AFKSDFL++L  RGFIHQIS+P  LD L ++G V +Y+GYD TA+SLH GHL  +M+L
Sbjct: 1   MTAFKSDFLNVLQSRGFIHQISDPDSLDALATRGEVVSYVGYDCTAASLHVGHLLSIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            WLQ TG+KPI+LMGGGT+ +GDPS RDE+R+++  ++I  N + IKG F+ FI++G GK
Sbjct: 61  HWLQATGNKPIALMGGGTTRVGDPSGRDETRKILTYEQIDANKDSIKGTFAKFIRFGDGK 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           +DA+M +N  WL  + YI++LR++G  FS+NRML+ +SV+ RL+REQ LSF+EFNYMILQ
Sbjct: 121 SDAVMADNAEWLTKLNYIEMLRDVGRHFSINRMLTMDSVKMRLEREQELSFIEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           +YDFVELA+ Y C LQMGGSDQWGNI+ G+DLG R+ T +L ALT PLLTT+SG KMGKT
Sbjct: 181 SYDFVELARRYGCNLQMGGSDQWGNIVTGVDLGRRMGTHQLHALTCPLLTTSSGAKMGKT 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
            +GA+WLN +M S Y++WQYWRN +DADV  F K  T LP+ E+ R+A LQG++INEAKK
Sbjct: 241 AAGAVWLNGDMLSAYDYWQYWRNTEDADVERFLKLFTLLPLDEVARLAALQGQDINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV-KA 359
           I+ATE T ++HGRE A+KA   A   F+    +  +PT+ +S+ E+  G+G+L     K 
Sbjct: 301 ILATEATALIHGREAADKAEATARTTFEQGGTASDLPTVELSRAELDAGLGVLVAFAEKT 360

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
           G   S  EARR +K+  +K+N+  +++EK+ +   D  + G IKLS GKK H++
Sbjct: 361 GLVASNGEARRQIKAGGLKVNDVAVTDEKMALTAADLTADGVIKLSMGKKKHVL 414


>gi|316934384|ref|YP_004109366.1| tyrosyl-tRNA synthetase [Rhodopseudomonas palustris DX-1]
 gi|315602098|gb|ADU44633.1| tyrosyl-tRNA synthetase [Rhodopseudomonas palustris DX-1]
          Length = 418

 Score =  505 bits (1301), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 233/418 (55%), Positives = 311/418 (74%), Gaps = 1/418 (0%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M AFKSDF+++L  RGFIHQIS+P  LD L ++G V AY+GYD TA+SLH GHL  +M+L
Sbjct: 1   MTAFKSDFMNVLQSRGFIHQISDPDSLDALAAKGEVVAYVGYDCTAASLHVGHLLSIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            WLQ TG+KPI+LMGGGT+ +GDPS RDE+R+++  ++I  N E IKG FS FIK+G G 
Sbjct: 61  HWLQATGNKPIALMGGGTTRVGDPSGRDETRKILTYEQIDANKESIKGTFSKFIKFGDGH 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           +DA+M +N  WL  + YI++LR++G  FS+NRML+ +SV+ RL REQ LSF+EFNYMILQ
Sbjct: 121 SDAVMADNAEWLTKLNYIEMLRDVGRHFSINRMLTMDSVKLRLDREQELSFIEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           +YDFVELA+ Y C LQMGGSDQWGNI+ G+DLG R+ T +L ALT PLLTTASG KMGKT
Sbjct: 181 SYDFVELARRYKCNLQMGGSDQWGNIVNGVDLGRRMGTHQLHALTCPLLTTASGAKMGKT 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
            +GA+WLN +M +PY++WQYWRN +DADV  F K  T LPM EI+R++KLQG EIN+AKK
Sbjct: 241 AAGAVWLNGDMLAPYDYWQYWRNTEDADVGRFLKLFTLLPMDEIERLSKLQGAEINDAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV-KA 359
           I+ATE T ++HGRE AEKA   A   F+    +Q +P++ I++ E+  G+G+L     K 
Sbjct: 301 ILATEATALMHGREAAEKAEATARTTFEQGGTAQDLPSVEIARAELDAGIGVLAAFAEKT 360

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           G   S  EARR +K+  +K+N++ +++EK+ +   D  + G IKLS GKK H++  L 
Sbjct: 361 GLVASNGEARRQIKAGGLKVNDAPVTDEKMTLTATDLSADGVIKLSMGKKKHVLLRLA 418


>gi|27379441|ref|NP_770970.1| tyrosyl-tRNA synthetase [Bradyrhizobium japonicum USDA 110]
 gi|81737266|sp|Q89M63|SYY_BRAJA RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|27352592|dbj|BAC49595.1| tyrosyl-tRNA synthetase [Bradyrhizobium japonicum USDA 110]
          Length = 417

 Score =  504 bits (1299), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 229/413 (55%), Positives = 304/413 (73%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M AFKSDFL+IL ERGFIHQ S+   LD L ++G  TAY+GYD TA SLH G+   +M+L
Sbjct: 1   MTAFKSDFLNILQERGFIHQCSDFEGLDALAAKGEATAYVGYDCTARSLHIGNYLTMMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            WLQ++G+KPI+LMGGGT+++GDPS +DE+R M    EI+ N E I+G+F+  ++YG GK
Sbjct: 61  HWLQQSGNKPITLMGGGTTMVGDPSGKDETRAMRTVAEIEANKESIRGVFAKVLRYGDGK 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           +DA+ML+N  WL  + +I++LR++G  FSVNRML+ +SVR RL+REQ +SF+EFNYM+ Q
Sbjct: 121 SDAVMLDNAEWLTKLNWIEMLRDVGRHFSVNRMLTMDSVRLRLEREQEMSFIEFNYMVCQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVELAK   C+LQMGGSDQWGNII G+DLG R+ T +LFALT+PLLTTASG KMGKT
Sbjct: 181 AYDFVELAKRTGCKLQMGGSDQWGNIIMGVDLGRRMGTHQLFALTTPLLTTASGAKMGKT 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
             GA+WLN +  SPY+FWQYWRN +DADV  F K  TTLPMSEI ++  L G EINEAKK
Sbjct: 241 AQGAVWLNADQFSPYDFWQYWRNTEDADVGKFLKLFTTLPMSEIGKLEALGGSEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           ++ATE T ++HGR+ A +AA  A   F+    ++ +PT+ I + E+  G G+L   VKAG
Sbjct: 301 VLATEATALLHGRDAANEAAETARRTFEEGALAESLPTVEIPRGELDAGFGVLNAFVKAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
              S  EARR +K   +++N+  ++++K+ +        G IKLSFGKK HI+
Sbjct: 361 LVASNGEARRQIKGGGLRVNDEPVTDDKMALSAAHLTPEGVIKLSFGKKKHIL 413


>gi|222086109|ref|YP_002544641.1| tyrosyl-tRNA synthetase [Agrobacterium radiobacter K84]
 gi|221723557|gb|ACM26713.1| tyrosyl-tRNA synthetase [Agrobacterium radiobacter K84]
          Length = 410

 Score =  504 bits (1299), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 238/403 (59%), Positives = 307/403 (76%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L ERGFIHQIS+   LD L ++  VTAYIG+D TA SLH G L Q+M+L WLQ TGH+ +
Sbjct: 4   LQERGFIHQISDEAGLDDLFAKETVTAYIGFDPTAPSLHVGSLMQIMMLHWLQATGHRAV 63

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           SLMGGGT ++GDPSF+DE+R++M    I+ NI  IK +FSS++ YG G  DALM+NN  W
Sbjct: 64  SLMGGGTGMVGDPSFKDEARQLMTVDTIESNIASIKRVFSSYLTYGDGPKDALMINNAEW 123

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L S+ Y++ LR++G  FSVNRMLSF+SV++RL REQSLSFLEFNYMILQAYDFVELAK Y
Sbjct: 124 LRSLNYLEFLRDVGRHFSVNRMLSFDSVKTRLDREQSLSFLEFNYMILQAYDFVELAKRY 183

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
           DCRLQ+GGSDQWGNI+ GIDLG R+ T +L+ALTSPLLTT+SG KMGK+ SGA+WLN ++
Sbjct: 184 DCRLQIGGSDQWGNIVNGIDLGHRMGTKQLYALTSPLLTTSSGAKMGKSASGAVWLNSDL 243

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVH 311
            S Y+FWQYWRN +DADV  F K  TTLPM EI R++ L G E+NE KKI+ATE+T ++H
Sbjct: 244 LSAYDFWQYWRNTEDADVSRFLKLYTTLPMDEIARLSALAGSELNEVKKILATEVTAILH 303

Query: 312 GREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRH 371
           GRE AE AA  A + F+    S+++P++ +   E+  G+GLL+LIV+AG A S  EARRH
Sbjct: 304 GREAAELAAETARKTFEEGGLSENLPSVEVPASELDAGIGLLSLIVRAGLAASNGEARRH 363

Query: 372 LKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           ++  A++IN+  +S+E+  I   +  + G IKLS GKK HI+ 
Sbjct: 364 VQGGAVRINDQAVSDERKLIGSGEITADGVIKLSLGKKKHILV 406


>gi|227822086|ref|YP_002826057.1| tyrosyl-tRNA synthetase [Sinorhizobium fredii NGR234]
 gi|227341086|gb|ACP25304.1| tyrosyl-tRNA synthetase [Sinorhizobium fredii NGR234]
          Length = 417

 Score =  500 bits (1287), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 248/414 (59%), Positives = 308/414 (74%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  FKSDFL  L ERGFI Q S+   LD L  +  VTAYIG+D TA SLHAG L Q+M+L
Sbjct: 1   MSEFKSDFLRTLHERGFIQQTSDDTGLDELFRKETVTAYIGFDPTAPSLHAGGLIQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            WLQ TGH+ ISLMGGGT ++GDPSF+DE+R++M  + I  NI  IK +FS+++ YG G 
Sbjct: 61  HWLQATGHRAISLMGGGTGMVGDPSFKDEARQLMTPETIAANIASIKTVFSNYLSYGEGP 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
            DALM+NN  WL  I Y++ LR++G  FSVNRMLSF+SV++RL REQSLSFLEFNYMILQ
Sbjct: 121 RDALMINNADWLLGINYLEFLRDVGRHFSVNRMLSFDSVKTRLDREQSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVEL K YDCRLQMGGSDQWGNII GIDLG R+ TP+L+ALTSPLLTTASG KMGK+
Sbjct: 181 AYDFVELNKRYDCRLQMGGSDQWGNIINGIDLGHRMGTPQLYALTSPLLTTASGAKMGKS 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           ++GAIWLN +M   Y+FWQYWRN +DADV  F K  TTLPM EI+R++KL G EINE KK
Sbjct: 241 VNGAIWLNPDMLGTYDFWQYWRNTEDADVTRFLKLYTTLPMPEIERLSKLGGSEINEVKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+ATEIT  +HGR  AE AA  A + F+    ++ +P+I +   E+  G+GLLTL+V+AG
Sbjct: 301 ILATEITATLHGRAAAENAAETARKTFEEGALAEDLPSIEVPAPELETGLGLLTLVVRAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            A S  EARRH++   ++IN+  I++E+  +   D    G IKLS GKK HI+ 
Sbjct: 361 LAASNGEARRHVQGGGVRINDEQINDERRVVGSADVTGDGVIKLSLGKKKHILV 414


>gi|92117855|ref|YP_577584.1| tyrosyl-tRNA synthetase [Nitrobacter hamburgensis X14]
 gi|91800749|gb|ABE63124.1| tyrosyl-tRNA synthetase [Nitrobacter hamburgensis X14]
          Length = 418

 Score =  500 bits (1287), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 226/414 (54%), Positives = 305/414 (73%), Gaps = 1/414 (0%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M AFKSDFL+IL ERGFIHQ S+   LD L ++G  TAY+GYD TA SLH G+   +M+L
Sbjct: 1   MAAFKSDFLNILQERGFIHQCSDVEGLDALAAKGQATAYVGYDCTAPSLHIGNYLTMMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
           +WLQ++G+KPI+LMGGGT+++GDPS +DESR +    EI+ N   I+G+F+  + YG+G 
Sbjct: 61  YWLQQSGNKPITLMGGGTTMVGDPSGKDESRAIRSVAEIEANKASIRGVFAKVLHYGSGA 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
            DA+ML+N  WL  + +I++LR+IG  FSVNRML+ +SVR RL+REQ +SF+EFNYM+ Q
Sbjct: 121 NDAVMLDNAEWLTKLNWIEMLRDIGRHFSVNRMLTMDSVRLRLEREQEMSFIEFNYMVCQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVEL++   CRLQMGGSDQWGNI+ G+DLG R+ TP+LFALT+PLLTTASG KMGKT
Sbjct: 181 AYDFVELSRRVGCRLQMGGSDQWGNIVNGVDLGRRMGTPQLFALTTPLLTTASGAKMGKT 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
             GA+WLN +  SPY+FWQYWRN++DADVV F K  T LPM EI ++A L+  EINEAKK
Sbjct: 241 AQGAVWLNADAFSPYDFWQYWRNVEDADVVRFLKLFTILPMDEIAKLAALRDAEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV-KA 359
           ++ATE T ++HGR+EAEKAA  A   F+    ++ +PT+ I   E+ +G+G+L     +A
Sbjct: 301 VLATEATALLHGRDEAEKAADTARTTFEQGAIAESLPTVDIPHSELKKGIGVLVAFSERA 360

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
               S  EARR +KS  +++N+  +++EK+ +        G IKLS GKK H++
Sbjct: 361 RLVASNGEARRQIKSGGLRVNDVAVTDEKMMLTSDHLTPEGVIKLSMGKKRHVL 414


>gi|75675860|ref|YP_318281.1| tyrosyl-tRNA synthetase [Nitrobacter winogradskyi Nb-255]
 gi|97201720|sp|Q3SS12|SYY_NITWN RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|74420730|gb|ABA04929.1| tyrosyl-tRNA synthetase [Nitrobacter winogradskyi Nb-255]
          Length = 417

 Score =  499 bits (1284), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 227/413 (54%), Positives = 302/413 (73%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M AFKSDFL+ L ERGFIHQ S+   LD L S+  VTAY GYD TA SLH GHL  +M++
Sbjct: 1   MVAFKSDFLNTLQERGFIHQCSDFEGLDALASRNQVTAYTGYDCTAPSLHVGHLLSIMMM 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            WLQ+TG+KPI+LMGGGT+ +GDPS RDE+R+++   +I  N E IKG F  F+ +G GK
Sbjct: 61  HWLQQTGNKPIALMGGGTTRVGDPSGRDETRKILSYDQIDANKESIKGTFLKFLVFGDGK 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
            DA+M +N  WL  + YI++LR++G  FS+NRML+ +SV+ RL+REQ LSF+EFNYMILQ
Sbjct: 121 NDAIMTDNAEWLTRLNYIEMLRDVGRHFSINRMLTMDSVKMRLEREQELSFIEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           +YD+VELA+ + C LQMGGSDQWGNI+ G+DLG R+ T +L+ALT PLLTT+SG KMGKT
Sbjct: 181 SYDYVELARRHGCNLQMGGSDQWGNIVNGVDLGRRMGTHQLYALTCPLLTTSSGAKMGKT 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
            +GA+WLN  M   Y++WQYWRN++DADV  F K  T LPM EI ++A LQG EINEAKK
Sbjct: 241 AAGAVWLNATMLPVYDYWQYWRNVEDADVGRFLKLFTILPMGEIAKLAALQGSEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           ++ATE T ++HGR+EAEKAA  A   F+    S+ +PT+ I + E++ G G+L L VKAG
Sbjct: 301 VLATEATALLHGRDEAEKAADTARTTFEQGAISESLPTLDIPRSELASGAGVLALFVKAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
              S  EARR +K   +++N+  ++++K+ +        G IKLS GKK H++
Sbjct: 361 LVASNGEARRQIKGGGLRVNDVAVADDKMVLTPDHLTPEGVIKLSMGKKRHVL 413


>gi|85716320|ref|ZP_01047293.1| tyrosyl-tRNA synthetase [Nitrobacter sp. Nb-311A]
 gi|85696836|gb|EAQ34721.1| tyrosyl-tRNA synthetase [Nitrobacter sp. Nb-311A]
          Length = 418

 Score =  498 bits (1281), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 227/414 (54%), Positives = 304/414 (73%), Gaps = 1/414 (0%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M AFKSDFL+IL ERGFIHQ S+   LD L ++G  TAY+GYD TA SLH G+   +M+L
Sbjct: 1   MSAFKSDFLNILQERGFIHQCSDFAGLDALAAKGEATAYVGYDCTAPSLHIGNYLTMMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
           +WLQ++G+KPI+LMGGGT+++GDPS +DESR +    EI+ N   I+G+F   ++YG+G 
Sbjct: 61  YWLQQSGNKPITLMGGGTTMVGDPSGKDESRAIRSVAEIEANKASIRGVFDKVLRYGSGP 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
            DA+ML+N  WL  + +I+ LR+IG  FSVNRML+ +SVR RL+REQ +SF+EFNYM+ Q
Sbjct: 121 NDAVMLDNAEWLTKLNWIETLRDIGRHFSVNRMLTMDSVRLRLEREQEMSFIEFNYMVCQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVEL++   CRLQMGGSDQWGNI+ G+DLG R+ TP+LFALT+PLLTTASG KMGKT
Sbjct: 181 AYDFVELSRRVGCRLQMGGSDQWGNIVNGVDLGRRMGTPQLFALTTPLLTTASGAKMGKT 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
             GA+WLN +  SPY+FWQYWRN++DADV  F K  T LPMSEI ++A L+  EINEAKK
Sbjct: 241 AQGAVWLNADAFSPYDFWQYWRNVEDADVGRFLKLFTILPMSEIAKLAALRDAEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV-KA 359
           ++ATE T ++HGR+EAEKAA  A   F+    ++ +PT+ I  DE+ RG+G+L     +A
Sbjct: 301 VLATEATALLHGRDEAEKAADTARTTFEQGSIAESLPTVDIKHDELERGIGVLVAFSERA 360

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
               S  EARR +K   +++N+  +++EK+ +        G IKLS GKK H++
Sbjct: 361 RLVASNGEARRQIKGGGLRVNDVAVADEKMILTPDHLTPEGVIKLSMGKKRHVL 414


>gi|91976924|ref|YP_569583.1| tyrosyl-tRNA synthetase [Rhodopseudomonas palustris BisB5]
 gi|91683380|gb|ABE39682.1| tyrosyl-tRNA synthetase [Rhodopseudomonas palustris BisB5]
          Length = 418

 Score =  497 bits (1279), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 221/414 (53%), Positives = 308/414 (74%), Gaps = 1/414 (0%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M AFKSDF+++L +RGFIHQIS+P  LD L S+  V AY+GYD TASSLH GHL  +M+L
Sbjct: 1   MTAFKSDFMNVLQQRGFIHQISDPESLDALASRREVVAYVGYDCTASSLHVGHLLSIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            WLQ TG+KP++LMGGGT+ +GDPS RDE+R+++  ++I+ N + IK +F++FI +G G 
Sbjct: 61  HWLQATGNKPVALMGGGTTRVGDPSGRDETRKILSLEQIEANKDSIKRVFANFITFGDGG 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
             ALM++N  WL  + YI++LR++G  FSVNRML+ +SVR RL+REQ LSF+EFNYMILQ
Sbjct: 121 NKALMVDNADWLTKLNYIEMLRDLGRHFSVNRMLTMDSVRMRLEREQELSFIEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           +YD+VEL++ + C LQMGGSDQWGNI+ G+DLG R+ T +L ALT PLLTT+SG KMGKT
Sbjct: 181 SYDYVELSRRHGCNLQMGGSDQWGNIVTGVDLGRRMGTQQLHALTCPLLTTSSGAKMGKT 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
            +GA+WLN +M   Y++WQYWRN +DADV  F K  T LP+ +I+R++KLQG EINEAKK
Sbjct: 241 AAGAVWLNGDMLPAYDYWQYWRNTEDADVGRFLKLFTLLPIDDIERLSKLQGAEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV-KA 359
           I+ATE T +VHGR+ A+KA   A   F+    +Q +P++ +++ E+  G+ +L     K+
Sbjct: 301 ILATEATALVHGRDAADKAEATARTTFEQGGTAQDLPSVDVARAELDAGLSVLAAFAEKS 360

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
           G   S  EARR +K+  +K+N+  +++EK+ +   D  + G IKLS GKK H++
Sbjct: 361 GLVASNGEARRQIKAGGLKVNDVPVTDEKMALTAADLTADGVIKLSMGKKKHVL 414


>gi|115524978|ref|YP_781889.1| tyrosyl-tRNA synthetase [Rhodopseudomonas palustris BisA53]
 gi|115518925|gb|ABJ06909.1| tyrosyl-tRNA synthetase [Rhodopseudomonas palustris BisA53]
          Length = 418

 Score =  495 bits (1275), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 227/414 (54%), Positives = 307/414 (74%), Gaps = 1/414 (0%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M AFKSDFL+IL  RGFIHQIS+P  LD L ++G   AY+GYD TA+SLH GHL  +M+L
Sbjct: 1   MTAFKSDFLNILQSRGFIHQISDPDSLDALAAKGDAVAYVGYDCTAASLHVGHLLSIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            WLQ+TG+KPI+LMGGGT+ +GDPS RDE+R+++  ++I  N + IKG F+  I +G GK
Sbjct: 61  HWLQQTGNKPIALMGGGTTRVGDPSGRDETRKILTYEQIDANKDSIKGTFAKMITFGDGK 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
            DA+M +N  WL  + YI++LR++G  FS+NRML+ +SV+ RL+REQ LSF+EFNYMILQ
Sbjct: 121 ADAIMADNAEWLTKLNYIEMLRDVGRHFSINRMLTMDSVKMRLEREQELSFIEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           +YDFVELA+ Y C LQMGGSDQWGNI+ G+DLG R+ T +L ALT PLLTT+SG KMGKT
Sbjct: 181 SYDFVELARRYGCNLQMGGSDQWGNIVNGVDLGRRMGTHQLHALTCPLLTTSSGAKMGKT 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
            +GA+WLN +M S Y++WQYWRN +DADV  F K  T L M E+ R+AKLQG EIN+AKK
Sbjct: 241 AAGAVWLNADMLSAYDYWQYWRNTEDADVERFLKLFTLLSMDEVARLAKLQGAEINDAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV-KA 359
           ++ATE T ++HGRE AEKA   A   F+    +Q +P++ ++K E+  G+G+L     K+
Sbjct: 301 VLATEATALMHGREAAEKAEATARTTFEQGGTAQDLPSVEVTKAELDAGIGVLAAFAEKS 360

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
           G   S  EARR +K+  +++N+  +++EK+ +   D  + G IKLSFGKK H++
Sbjct: 361 GLVASNGEARRQIKAGGLRVNDVAVTDEKMALTAADLSADGVIKLSFGKKKHVL 414


>gi|298291329|ref|YP_003693268.1| tyrosyl-tRNA synthetase [Starkeya novella DSM 506]
 gi|296927840|gb|ADH88649.1| tyrosyl-tRNA synthetase [Starkeya novella DSM 506]
          Length = 423

 Score =  493 bits (1268), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 234/420 (55%), Positives = 303/420 (72%), Gaps = 6/420 (1%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  F+SDFL  L ERGFIHQIS+ + LD L ++  VTAYIG+D TA SLHAG L Q+M+L
Sbjct: 1   MSKFRSDFLRTLDERGFIHQISDEQGLDDLFAKETVTAYIGFDPTAPSLHAGGLIQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            WLQ+TGH+P+SLMGGGT ++GDPSF+DE+R++M    I+ NI  I+ +FS+++ YG   
Sbjct: 61  HWLQQTGHRPVSLMGGGTGMVGDPSFKDEARQLMTVDTIEANIASIRRVFSNYLSYGDSN 120

Query: 121 -----TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFN 175
                  ALM+NN  WL  + Y++ LR++G  FSVNRMLSF+SV+ RL+REQSLSFLEFN
Sbjct: 121 HGDSLRGALMINNAEWLRELNYLEFLRDVGRHFSVNRMLSFDSVKMRLEREQSLSFLEFN 180

Query: 176 YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT 235
           YMILQAYDFVEL K Y  RLQMGGSDQWGNI+ GIDLG R+ +P+L+ALTSPLLTTASG 
Sbjct: 181 YMILQAYDFVELNKRYGVRLQMGGSDQWGNIVNGIDLGHRMGSPQLYALTSPLLTTASGA 240

Query: 236 KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI 295
           KMGKTL GA+WLN ++  PY FWQYWRN +DADV  F K  TTLPM+EI R++ L G E+
Sbjct: 241 KMGKTLGGAVWLNADLLGPYEFWQYWRNTEDADVPRFLKLYTTLPMAEIARLSALGGAEL 300

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTL 355
           NE KKI+ATE+T M+HGR  AE AA  A + F+    S  +PT+ +   E+  G+G+L  
Sbjct: 301 NEVKKILATEVTAMLHGRAAAEAAAETARKTFEEGGLSADLPTVEVPAGELEAGIGVLAA 360

Query: 356 IV-KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
              K G   S  EARR +K   +K+N++ +++EK  +  +D    G +KLS GKK H++ 
Sbjct: 361 FAEKTGLVASNGEARRQIKGGGLKVNDATVTDEKAVLTARDLTPEGVVKLSLGKKKHVLL 420


>gi|148255351|ref|YP_001239936.1| tyrosyl-tRNA synthetase [Bradyrhizobium sp. BTAi1]
 gi|146407524|gb|ABQ36030.1| tyrosyl-tRNA synthetase [Bradyrhizobium sp. BTAi1]
          Length = 417

 Score =  492 bits (1266), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 223/414 (53%), Positives = 305/414 (73%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  FKSDFL++L  RGFIHQ S+   LD L ++G  TAY+GYD TA SLH G+   +M+L
Sbjct: 1   MTGFKSDFLNVLQSRGFIHQCSDFEGLDALAAKGQATAYVGYDCTARSLHIGNFLTMMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
           +WLQ+TG+KPI+LMGGGT+++GDPS +DE+R M   +EI+ N   I+G+F+  + YG G 
Sbjct: 61  YWLQQTGNKPITLMGGGTTMVGDPSGKDETRAMRTVEEIEANKASIRGVFAKVLAYGDGA 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           TDA+ML+N  WL  + +I++LR+IG  FSVNRML+ +SVR RL+REQ +SF+EFNYM+ Q
Sbjct: 121 TDAIMLDNAEWLTKLNWIEMLRDIGRHFSVNRMLTMDSVRLRLEREQEMSFIEFNYMVCQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVEL++   CRLQMGGSDQWGNI+ G++LG R+ T +LFALT+PLLTTASG KMGKT
Sbjct: 181 AYDFVELSRRTGCRLQMGGSDQWGNIVNGVELGRRMGTEQLFALTTPLLTTASGAKMGKT 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
             GAIWLN +  SPY+FWQYWRN +DADVV F K  TTLP+SEI+++  LQG EINEAKK
Sbjct: 241 AQGAIWLNADQCSPYDFWQYWRNTEDADVVKFLKLFTTLPLSEIEKLGALQGAEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
            +A   TT++HG E A  AA  A   F+    ++++PT+ +++ E+  G+G+L   VKAG
Sbjct: 301 ALADAATTLLHGEEAARTAAETARRTFEEGAIAENLPTVEVAQAELDAGLGVLNAFVKAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
              S  EARR +K   +++N+  +++EK+ +  ++  + G IKLS GKK H++ 
Sbjct: 361 LVASNGEARRQIKGGGLRVNDVAVTDEKMALTAKELTAEGVIKLSLGKKRHVLV 414


>gi|209885123|ref|YP_002288980.1| tyrosyl-tRNA synthetase [Oligotropha carboxidovorans OM5]
 gi|209873319|gb|ACI93115.1| tyrosyl-tRNA synthetase [Oligotropha carboxidovorans OM5]
          Length = 417

 Score =  492 bits (1266), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 229/413 (55%), Positives = 303/413 (73%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  +KSDFL++L +RG IHQIS+   LD  C++G +TAY+GYD TA+SLH G+L  + +L
Sbjct: 1   MTVYKSDFLNVLEQRGLIHQISDAEGLDDACTKGPITAYVGYDATATSLHIGNLISVTML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
           +WLQ+TGH+PI+LMGGGTS++GDPSFRD+ R+++    I  NIE IK IF   ++YG G 
Sbjct: 61  YWLQQTGHRPITLMGGGTSMVGDPSFRDDQRKLLDEATIASNIEGIKKIFGRILRYGDGP 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           TDALM+NN  WL  + Y+  LR++G +FSVNRMLSF+SV+ RL REQSLSFLEFNYMI+Q
Sbjct: 121 TDALMINNADWLLKLNYVSFLRDVGRYFSVNRMLSFDSVKLRLDREQSLSFLEFNYMIMQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
            YDFVE+ + Y C LQMGGSDQWGNII G+DL  R+  P+L+ALT+PLLTTASG KMGK+
Sbjct: 181 GYDFVEINRRYGCILQMGGSDQWGNIINGVDLSHRMGGPQLYALTTPLLTTASGAKMGKS 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
             GA+WLN E+ SPY+FWQY+RN +DADV  F K  T LP+ EI ++ KL G EINEAKK
Sbjct: 241 AKGAVWLNGELFSPYDFWQYFRNTEDADVGRFLKVFTRLPLDEIAKLEKLGGAEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+ATE T +VHGRE AE+AA  A   F+    ++++PT  I + E+  G G++ L VKAG
Sbjct: 301 ILATEATAVVHGREAAEEAAETARRTFEEGAIAENLPTFEIPQAELEAGAGVVALFVKAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
              S  EARR +K   +++N+  ++++K+ +        G IKLS GKK HI+
Sbjct: 361 LVASNGEARRQIKGGGLRVNDKPVTDDKMALTPAALTPEGVIKLSLGKKRHIL 413


>gi|163759545|ref|ZP_02166630.1| tyrosyl-tRNA synthetase [Hoeflea phototrophica DFL-43]
 gi|162283142|gb|EDQ33428.1| tyrosyl-tRNA synthetase [Hoeflea phototrophica DFL-43]
          Length = 417

 Score =  491 bits (1263), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 231/414 (55%), Positives = 307/414 (74%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M A+KSDFL+IL+ERGFIHQ S+   LD L S+G    YIGYD TA SLH G+   +M+L
Sbjct: 1   MSAYKSDFLNILNERGFIHQCSDFEGLDTLASKGEAVGYIGYDCTAPSLHIGNYLTMMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
           +WLQ++G+KPI+LMGGGT+++GDPS +DE+R++   +EI  N + IK +FS  + +G G 
Sbjct: 61  YWLQQSGNKPIALMGGGTTMVGDPSGKDETRQLRTVEEIGANKDSIKQVFSRVLNFGDGA 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
            DA+M++N  WL  + YID+LR++G  FSVNRMLS +SVR RL+REQ +SF+EFNYM+ Q
Sbjct: 121 HDAIMVDNADWLLKLSYIDMLRDVGRHFSVNRMLSMDSVRLRLEREQEMSFIEFNYMVCQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           +YD+VELA+ Y C LQMGGSDQWGNI+ G++LG R+ T +L+ALT+PLLTTASG KMGKT
Sbjct: 181 SYDYVELARRYGCNLQMGGSDQWGNIVNGVELGRRMGTHQLYALTTPLLTTASGEKMGKT 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
            +GA+WLN +M S ++FWQYWRN +DADV  F KR T LPM EI R+  LQG EINEAKK
Sbjct: 241 ANGAVWLNADMFSAWDFWQYWRNAEDADVGRFLKRFTILPMDEIRRLEALQGAEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           ++A E T ++HGR  AE+AA  A + F+    S ++PTISI  DE+  G+GLL L V+AG
Sbjct: 301 VLANEATALLHGRAAAEEAAETARKTFEEGAISDNLPTISIPSDELQSGVGLLALFVRAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            A S  EARRH++  AIK+N+  IS++K  +     +  G IKLS GKK H++ 
Sbjct: 361 LAGSNGEARRHVQGGAIKLNDVAISDDKTLVNSGYLNDDGVIKLSLGKKKHVLV 414


>gi|146340490|ref|YP_001205538.1| tyrosyl-tRNA synthetase [Bradyrhizobium sp. ORS278]
 gi|146193296|emb|CAL77312.1| tyrosine tRNA synthetase [Bradyrhizobium sp. ORS278]
          Length = 417

 Score =  490 bits (1262), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 223/414 (53%), Positives = 303/414 (73%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  FKSDFL++L  RGFIHQ S+   LD L ++G  TAY+GYD TA SLH G+   +M+L
Sbjct: 1   MTGFKSDFLNVLQSRGFIHQCSDFEGLDTLAAKGQATAYVGYDCTARSLHIGNFLTMMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
           +WLQ+TG+KPI+LMGGGT+++GDPS +DE+R M   +EI+ N   I+G+F+  ++YG G 
Sbjct: 61  YWLQQTGNKPITLMGGGTTMVGDPSGKDETRAMRTVEEIEANKASIRGVFAKVLRYGDGA 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           TDA+ML+N  WL  + +I++LR+IG  FSVNRML+ +SVR RL+REQ +SF+EFNYM+ Q
Sbjct: 121 TDAIMLDNAEWLTKLNWIEMLRDIGRHFSVNRMLTMDSVRLRLEREQEMSFIEFNYMVCQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVEL++   CRLQMGGSDQWGNI+ G++LG R+ T +LFALT+PLLTTASG KMGKT
Sbjct: 181 AYDFVELSRRTGCRLQMGGSDQWGNIVNGVELGRRMGTEQLFALTTPLLTTASGAKMGKT 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
             GAIWLN +  SPY FWQYWRN +DADVV F K  TTLP++EI+++  LQG EINEAKK
Sbjct: 241 AQGAIWLNADQCSPYEFWQYWRNTEDADVVKFLKLFTTLPLAEIEKLGALQGAEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
            +A   TT++HG E A  AA  A   F+    ++++P + +++ E+  G+G+L   VKAG
Sbjct: 301 ALADAATTLLHGGEAARTAAETARRTFEEGAIAENLPKVEVARSELDAGLGVLNAFVKAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
              S  EARR +K   +++N+  +++EK+ +   D  S G IKLS GKK H++ 
Sbjct: 361 LVASNGEARRQIKGGGLRVNDVAVTDEKMTLTRADLTSEGVIKLSLGKKRHVLV 414


>gi|90417698|ref|ZP_01225610.1| tyrosyl-tRNA synthetase [Aurantimonas manganoxydans SI85-9A1]
 gi|90337370|gb|EAS51021.1| tyrosyl-tRNA synthetase [Aurantimonas manganoxydans SI85-9A1]
          Length = 417

 Score =  488 bits (1257), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 230/414 (55%), Positives = 302/414 (72%), Gaps = 1/414 (0%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  FKS+FL+ L+ERGFIHQ S+   LD L     VT YIG+D TA+SLH G L Q+M+L
Sbjct: 1   MTRFKSEFLATLAERGFIHQTSDDNGLDDLFRSETVTGYIGFDPTAASLHVGSLMQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            W+Q+TGH+PI+LMGGGT +IGDPSF+DE+R++     I  N+  IK  F  +I++G G 
Sbjct: 61  HWMQQTGHRPIALMGGGTGMIGDPSFKDEARKLQTEDTIASNLAGIKRSFQPYIRFGDGP 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           TDA+M++N  WL  + Y+  LR++G  FSVNRMLSF+SV+ RL REQSLSFLEFNYMILQ
Sbjct: 121 TDAVMVDNAEWLLELNYVAFLRDVGRHFSVNRMLSFDSVKLRLDREQSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVEL K   C+LQMGGSDQWGNI+ GIDLG R++   L+ALTSPLLTT+SG KMGKT
Sbjct: 181 AYDFVELYKRTGCKLQMGGSDQWGNIVNGIDLGRRMEGADLYALTSPLLTTSSGAKMGKT 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
            SGAIWLN +M S Y+FWQYWRN +DADV  F K  TTLPM EI R+  L G EIN+AKK
Sbjct: 241 ASGAIWLNDDMLSAYDFWQYWRNTEDADVGRFLKLYTTLPMDEIARLEALGGSEINDAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           ++A E+T M+HGR  AE +A  A + F+    +  +PTI +    ++ G+GLL+L+V AG
Sbjct: 301 VLANEVTAMLHGRAAAEASAETARKTFEEGALADSLPTIEVPAASLAEGVGLLSLLVSAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            A+S  EARRH+K  A+++N++ +++E+L +   D    G +KLS G+K H++ 
Sbjct: 361 LASSNGEARRHIKGGAVRVNDAQVTDERLMVG-TDALVQGVVKLSVGRKKHVLV 413


>gi|118590058|ref|ZP_01547462.1| tyrosyl-tRNA synthetase [Stappia aggregata IAM 12614]
 gi|118437555|gb|EAV44192.1| tyrosyl-tRNA synthetase [Stappia aggregata IAM 12614]
          Length = 417

 Score =  487 bits (1253), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 230/413 (55%), Positives = 302/413 (73%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  FKSDFL++LSERGFIHQIS+P+ LD LC++  VTAYIG+D TA SLHAG L  +M+L
Sbjct: 1   MSEFKSDFLNVLSERGFIHQISDPKGLDALCAKETVTAYIGFDCTAPSLHAGSLVPIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            W QKTGH+PI+LMGGGT+ +GDPS +DESR+++    I+EN   I+ +F   + +G G 
Sbjct: 61  HWFQKTGHRPIALMGGGTTRVGDPSGKDESRKILTEDVIEENKAGIRKVFEKLLTFGEGP 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           TDA+ML+N  WL  + Y+D LR+IG  FSVN+M+  +SVR RL+REQ LSFLEFNYM+LQ
Sbjct: 121 TDAIMLDNADWLLKLNYVDFLRDIGRHFSVNQMIQRDSVRLRLEREQHLSFLEFNYMLLQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
            YD++EL +   CRLQMGGSDQWGNI+ G DL  RL   + FALTSPLLTT+SG KMGKT
Sbjct: 181 GYDYLELYRRTGCRLQMGGSDQWGNILSGTDLVRRLADVEAFALTSPLLTTSSGAKMGKT 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
            +GA+WLN+E  S Y++WQYWRN +DADV  F K  T LPM EI R+A L+G EINEAKK
Sbjct: 241 AAGAVWLNEEQLSAYDYWQYWRNTEDADVERFMKLFTVLPMDEIARLAALRGSEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+ATE T ++HGRE AE AA  A + F+    ++ +PT+ I+K ++  G+G+L+  V AG
Sbjct: 301 ILATEATALIHGRENAEAAAETARKAFEEGQSAEGLPTVEIAKADLEAGLGVLSAFVTAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
              S  + RR++K  A+KIN+    ++K QI L D  + G +KLS GKK H++
Sbjct: 361 LCASNGDVRRNIKGGAVKINDKGEQDDKRQITLADVTADGIVKLSLGKKKHVL 413


>gi|182677022|ref|YP_001831168.1| tyrosyl-tRNA synthetase [Beijerinckia indica subsp. indica ATCC
           9039]
 gi|254783567|sp|B2IAX9|SYY_BEII9 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|182632905|gb|ACB93679.1| tyrosyl-tRNA synthetase [Beijerinckia indica subsp. indica ATCC
           9039]
          Length = 421

 Score =  480 bits (1236), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 225/413 (54%), Positives = 299/413 (72%), Gaps = 3/413 (0%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           SDFL+IL+ERGF+HQ S+P  LD     G + AYIG+D TA SLH G L Q+M+L WLQK
Sbjct: 9   SDFLAILTERGFLHQCSDPAGLDEKAKSGGLIAYIGFDCTAPSLHVGSLVQIMMLRWLQK 68

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
           TG KPI LMGGGT+ +GDPS +DESR+++  +EI+ N + IK +FS F+ +G GKTDALM
Sbjct: 69  TGGKPIVLMGGGTTRVGDPSGKDESRKILTLEEIEANKQGIKQVFSKFVHFGEGKTDALM 128

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
            +N  WL ++ YID LR++G  FSVNRMLS +SV+ RL+R+Q LSFLEFNYM  QAYDFV
Sbjct: 129 ADNAEWLTALHYIDFLRDVGRHFSVNRMLSMDSVKLRLERDQELSFLEFNYMCCQAYDFV 188

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           EL K Y C+LQMGGSDQWGNI+ GIDLG R+ T +L+ALTSPLLTTASG KMGKT  GA+
Sbjct: 189 ELHKRYGCQLQMGGSDQWGNIVTGIDLGRRMGTAQLYALTSPLLTTASGAKMGKTAKGAV 248

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
           WL++ M   +++WQ+WRN +D DV  F K  T LP+ EI R+  LQ  EINEAKKI+ATE
Sbjct: 249 WLDEAMLPVFDYWQFWRNCEDRDVGRFLKLFTELPLDEIARLEALQDAEINEAKKILATE 308

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV-SRGMGLLTLIVKAGFATS 364
            T MVHGRE AE+AA  A + F+  + +  +P++ +  +E+ + G+G+L    KAG   S
Sbjct: 309 ATAMVHGREAAERAADTARQTFEEGVVAASLPSVILQTNEIPAEGLGILAAFAKAGLVNS 368

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           T+EARR +K   +++N+  I++EK  I ++  ++    KLS G+K H++  L 
Sbjct: 369 TSEARRQIKGGGLRLNDQPITDEKAVITIEAIEA--GAKLSLGRKKHVLLRLA 419


>gi|307941925|ref|ZP_07657278.1| tyrosyl-tRNA synthetase [Roseibium sp. TrichSKD4]
 gi|307774831|gb|EFO34039.1| tyrosyl-tRNA synthetase [Roseibium sp. TrichSKD4]
          Length = 417

 Score =  474 bits (1221), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 224/413 (54%), Positives = 297/413 (71%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  FKS+++ +LSERG+IHQ+S+P+ LD LC++  VTAYIG+D TA SLH G L Q+M+L
Sbjct: 1   MSEFKSEYMQVLSERGYIHQVSDPKGLDELCAKESVTAYIGFDCTAPSLHVGSLVQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            W QKTGH+PI+LMGGGT+ +GDPS +DESR+++   +I+ N   IK +F   + +G G 
Sbjct: 61  HWFQKTGHRPIALMGGGTTRVGDPSGKDESRKILTPDDIEANKAGIKQVFEKLLTFGDGP 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
            DA+M++N  WL S+ Y+D LREIG  FSVN+M+  +SVR RL+REQ LSFLEFNYM+LQ
Sbjct: 121 QDAVMVDNADWLLSLNYVDFLREIGRHFSVNQMIQRDSVRLRLEREQHLSFLEFNYMLLQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
            YD++EL +   CRLQMGGSDQWGNI+ G DL  RL+  + FALTSPLLTTASG KMGKT
Sbjct: 181 GYDYLELYRRTGCRLQMGGSDQWGNILSGTDLVRRLEGVESFALTSPLLTTASGAKMGKT 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
             GA+WLN++  S Y++WQYWRN +DADV  F K  T LPM EI R+A L+G EINEAKK
Sbjct: 241 ADGAVWLNEDQLSAYDYWQYWRNTEDADVERFLKLFTLLPMDEIARLAALEGSEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           ++ATE T ++HGRE A+ AA  A + F+    +  +PTI I+K ++  G+G+LT  V AG
Sbjct: 301 VLATEATALLHGREAADAAAETARKAFEEGQSAAGLPTIEIAKSDLEAGLGILTAFVTAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
              S  E RR++K  A+KIN+   S+ +  I   D    G +KLS GKK H++
Sbjct: 361 LCASNGEVRRNIKGGAVKINDKGESSHERSITPADITEDGIVKLSLGKKKHVL 413


>gi|328543676|ref|YP_004303785.1| Tyrosyl-tRNA synthetase protein [polymorphum gilvum SL003B-26A1]
 gi|326413420|gb|ADZ70483.1| Tyrosyl-tRNA synthetase protein [Polymorphum gilvum SL003B-26A1]
          Length = 418

 Score =  474 bits (1220), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 218/413 (52%), Positives = 298/413 (72%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  FKS+FL  L +RGFIHQIS+P+ LD LC+   VTAYIG+D TA SLH G L Q+M+L
Sbjct: 1   MTEFKSEFLKTLGDRGFIHQISDPKGLDKLCASETVTAYIGFDCTAPSLHVGSLVQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
           +WLQ+TGH+PI+LMGGGT+ +GDPS +DESR+++  + I+ N   I+ +F   + +G G 
Sbjct: 61  YWLQQTGHRPIALMGGGTTRVGDPSGKDESRQLLTPETIEANKAGIRKVFERLLVFGDGP 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           TDALM++N  WL  + Y+D LRE+G  FSVN+M+  +SVR RL+RE  LSFLEFNYM+LQ
Sbjct: 121 TDALMMDNADWLLKLNYVDFLREVGRHFSVNQMIQRDSVRLRLEREHHLSFLEFNYMLLQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
            YD++E+ +   CRLQMGGSDQWGNI+ G+DL  R++  + FALTSPLLTTASG KMGKT
Sbjct: 181 GYDYLEIYRRTGCRLQMGGSDQWGNILSGVDLTRRMEGTETFALTSPLLTTASGAKMGKT 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
            +GA+WLN++  S Y++WQYWRN +DADV  F K  TTLP+ EI R+A L+G EINEAKK
Sbjct: 241 AAGAVWLNEDQLSSYDYWQYWRNTEDADVERFLKLFTTLPLDEIARLAALEGAEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
            +ATE T +VHGR  AE AA  A + F+       +PT+ +   ++  G+G+L   V AG
Sbjct: 301 TLATEATALVHGRAAAEAAAETARKAFEEGETDAGLPTVDLPAAQLDAGLGILNAFVAAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
              S  E RR++K  A+++N+++++++ LQ+   D  + G IKLS GKK H++
Sbjct: 361 LCASNGEVRRNIKGGAVRVNDAVVADDTLQLTGADVTAQGVIKLSLGKKKHVL 413


>gi|154253705|ref|YP_001414529.1| tyrosyl-tRNA synthetase [Parvibaculum lavamentivorans DS-1]
 gi|154157655|gb|ABS64872.1| tyrosyl-tRNA synthetase [Parvibaculum lavamentivorans DS-1]
          Length = 416

 Score =  474 bits (1219), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 237/418 (56%), Positives = 300/418 (71%), Gaps = 2/418 (0%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  FKSDFL  L  RGFIHQ S+   LD + +  V+T YIGYD TA SLH GHL Q+M+L
Sbjct: 1   MAKFKSDFLRELEARGFIHQQSDAGALDEIAATRVLTGYIGYDCTAPSLHVGHLMQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            WLQKTG KPI+LMGGGT+ IGDPSFRDE+R ++  ++I EN+  IK +FS F+ +G G+
Sbjct: 61  RWLQKTGGKPIALMGGGTTRIGDPSFRDEARPLLTDEKIDENLAGIKNVFSKFLDFGAGE 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           T A+M+NN  WL  ++YID LR+ G  FSVNRMLSF+SV+ RL REQ+LSFLEFNYMILQ
Sbjct: 121 TGAIMVNNRDWLDKLQYIDFLRDYGRHFSVNRMLSFDSVKLRLDREQNLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVEL + Y C LQMGGSDQWGNI+ GI+L  R    ++F LTSPLLTT+SG KMGKT
Sbjct: 181 AYDFVELNRQYGCELQMGGSDQWGNIVNGIELARRTAGAQVFGLTSPLLTTSSGAKMGKT 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
            SGA+WLN +M SPY +WQYWRN +DADV  F K  T LP+SEI R   L G EINEAKK
Sbjct: 241 ASGAVWLNADMLSPYEYWQYWRNAEDADVGRFLKLFTELPLSEIARFEALGGSEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           ++ATE T MVHGR EAEKAA AA   F+    S  +PT+   +      +GLLT +V+AG
Sbjct: 301 VLATETTAMVHGRAEAEKAAEAARTAFEEGAISADLPTVETGELAGG--LGLLTALVQAG 358

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLCG 418
              ST++ARR +K  A+++N++ +++EK+ +  +     G +KLS GKK H++    G
Sbjct: 359 LCASTSDARRQIKGGAVRVNDAAVADEKMVLNRESLTGDGVVKLSLGKKKHVLLRPKG 416


>gi|300023869|ref|YP_003756480.1| tyrosyl-tRNA synthetase [Hyphomicrobium denitrificans ATCC 51888]
 gi|299525690|gb|ADJ24159.1| tyrosyl-tRNA synthetase [Hyphomicrobium denitrificans ATCC 51888]
          Length = 418

 Score =  473 bits (1217), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 229/414 (55%), Positives = 297/414 (71%), Gaps = 1/414 (0%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           MP  KS+FL I++ERGFIHQ S+   LD   S+G + AY GYD TA SLH GHL  +M+L
Sbjct: 1   MPTLKSEFLQIMTERGFIHQCSDLDGLDKAGSEGRIVAYAGYDCTAPSLHVGHLISIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            WLQKTG KPI+LMGGGT+ +GDPS +DE+R++   +EI  N E IK +FS+F+ +G+ K
Sbjct: 61  SWLQKTGGKPIALMGGGTTRVGDPSGKDETRQIRTVEEIDANKESIKRVFSNFLTFGSAK 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           +DALM++N  WL  + YI+ LR++G  FSVNRML+ +S + RL REQ LSF+EFNYM+LQ
Sbjct: 121 SDALMVDNAEWLAPLNYIEFLRDVGRHFSVNRMLTMDSAKLRLDREQELSFIEFNYMLLQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT-PKLFALTSPLLTTASGTKMGK 239
           +YDFVEL + Y C LQMGGSDQWGNI+ GIDLG R+    +LF LT PLLTT+SG KMGK
Sbjct: 181 SYDFVELNRRYGCNLQMGGSDQWGNIVTGIDLGRRMGVKEQLFGLTCPLLTTSSGAKMGK 240

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAK 299
           T SGA+WLN+   S Y++WQ+WRN +DADV  F K  T LP+ EI R++ L G EINEAK
Sbjct: 241 TASGAVWLNEAQLSAYDYWQFWRNTEDADVARFLKLFTMLPLDEIARLSSLGGAEINEAK 300

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKA 359
           K +ATE T +VHGRE+AE AA  A + F+    +  +PTI IS  E   G+G+LT  VKA
Sbjct: 301 KTLATEATALVHGREKAEAAAETARKTFEQGALATDLPTIEISSAEFDAGLGVLTAFVKA 360

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
           G   S +EARR ++   +KIN+  ++++K  IK  D  S G IKLS GKK H++
Sbjct: 361 GLVASNSEARRQIQGGGLKINDEAVTSDKAVIKATDAVSNGVIKLSLGKKKHVL 414


>gi|154248394|ref|YP_001419352.1| tyrosyl-tRNA synthetase [Xanthobacter autotrophicus Py2]
 gi|254765190|sp|A7INU9|SYY_XANP2 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|154162479|gb|ABS69695.1| tyrosyl-tRNA synthetase [Xanthobacter autotrophicus Py2]
          Length = 416

 Score =  472 bits (1215), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 217/410 (52%), Positives = 293/410 (71%), Gaps = 3/410 (0%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           F+SDFL  L ERG+IHQ S+   LD   ++G +TAYIG+D TASSLHAGHL  +M+L  L
Sbjct: 6   FRSDFLRTLHERGYIHQCSDLERLDAKAAEGPITAYIGFDATASSLHAGHLLSIMMLRTL 65

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q+TGH PI+LMGGGT+ IGDPS +DE+R+M+  Q+I++NI  I+ +F+ F+ +G G   A
Sbjct: 66  QRTGHNPIALMGGGTTKIGDPSGKDEARKMLTDQQIEDNIASIRKVFARFLDFGAG---A 122

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            M NN +WL  +KYI LLRE+G  F++NRML+F+SV+ RL+REQ L+FLEFNYMILQAYD
Sbjct: 123 KMENNASWLDELKYIPLLREVGPHFTINRMLTFDSVKLRLEREQPLTFLEFNYMILQAYD 182

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           FVEL   + C LQMGGSDQWGNI+ G++LG R++   LFALT+PLLTT+SG KMGKT  G
Sbjct: 183 FVELNARHGCILQMGGSDQWGNIVNGMELGRRMRGADLFALTTPLLTTSSGAKMGKTAGG 242

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIA 303
           A+WL+ ++ SPY +WQYWRN  DADV  F K  T LP+ EI R+A L+G+EIN AK+++A
Sbjct: 243 AVWLDADLLSPYEYWQYWRNAGDADVERFLKLFTELPLDEIARLAALEGQEINHAKEVLA 302

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
           TE T ++HGRE AEKA   +   F     +  +PT+ + +  +  G+ +    V AG   
Sbjct: 303 TEATALLHGREAAEKAKETSRATFADGALAVDLPTVEVPRATLEAGLPVAKAFVDAGLVA 362

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
           ST+EARR +K   +K+N+  +++EK  I L      G +KLS GKK H++
Sbjct: 363 STSEARRQIKGGGLKVNDVTVTDEKAVIDLGALTPEGVVKLSLGKKKHVL 412


>gi|312112867|ref|YP_004010463.1| tyrosyl-tRNA synthetase [Rhodomicrobium vannielii ATCC 17100]
 gi|311217996|gb|ADP69364.1| tyrosyl-tRNA synthetase [Rhodomicrobium vannielii ATCC 17100]
          Length = 420

 Score =  469 bits (1206), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 211/412 (51%), Positives = 300/412 (72%)

Query: 2   PAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
           PA  SDF+ IL ERG++HQ+S+   L    ++G +TAYIG+D TA SLH GHL  +M+L 
Sbjct: 4   PATHSDFVQILKERGYLHQVSDEEGLRKRAAEGRITAYIGFDCTAPSLHVGHLISIMMLR 63

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKT 121
            LQK+GH+PI L+GGGT+ +GDPS +DE R+++   +I  N   +K ++  F+ +G G  
Sbjct: 64  ILQKSGHRPIVLLGGGTTKVGDPSGKDEQRKILSQADIDFNKASLKTVYERFLTFGDGPA 123

Query: 122 DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA 181
           DA+M +N+ WL S++YI+ LR+ G  F++NRML+F+SV+ RL REQ L+FLEFNYM+LQA
Sbjct: 124 DAIMADNDEWLSSLRYIEFLRDYGRHFTINRMLTFDSVKLRLDREQPLTFLEFNYMLLQA 183

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
           YDF+EL++ Y C LQMGGSDQWGNI+ G++LG R+   +LFALT+PLLTT+SG KMGK+ 
Sbjct: 184 YDFLELSRRYGCVLQMGGSDQWGNIVNGMELGRRVDGRELFALTTPLLTTSSGAKMGKSA 243

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKI 301
            GA+WLN ++ SPY +WQYWRN +D DV  F K  T +P+ EI R+  LQG EINEAKKI
Sbjct: 244 GGAVWLNADLLSPYEYWQYWRNTEDGDVGRFLKLFTEMPLDEIARLEALQGAEINEAKKI 303

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGF 361
           +ATE+T ++HGRE AE AA  A   F+    ++ +PT+ I + E++ G+G+L   VKAG 
Sbjct: 304 LATEVTALLHGREAAETAADTARRAFEEGAAAEGLPTVEIPRGELAEGVGILNAAVKAGL 363

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
             ST++ARR +K  A+K+N+  +++++  + L + D+ G IKLS GKK H++
Sbjct: 364 VASTSDARRQIKGGALKVNDVAVTDDRASVSLANLDAEGVIKLSLGKKRHVL 415


>gi|218531163|ref|YP_002421979.1| tyrosyl-tRNA synthetase [Methylobacterium chloromethanicum CM4]
 gi|218523466|gb|ACK84051.1| tyrosyl-tRNA synthetase [Methylobacterium chloromethanicum CM4]
          Length = 423

 Score =  468 bits (1205), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 219/415 (52%), Positives = 298/415 (71%), Gaps = 2/415 (0%)

Query: 3   AFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
           A KSDF+ +L ERG+IHQ S+   +D L ++G +T Y GYD TA+SLH GHL  +M+L W
Sbjct: 7   APKSDFIRVLQERGYIHQASDLAGIDALAAEGGLTTYTGYDCTAASLHVGHLLSIMMLHW 66

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD 122
           LQKTG KP+ LMGGGT+ +GDPS RDE+R+++  ++I+ N E IK  FS F+ +G G   
Sbjct: 67  LQKTGGKPVVLMGGGTTRVGDPSGRDETRKILTLEQIEANKEGIKQTFSRFLSFGEGGNG 126

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
           A+M++N  WL  + YI++LR+IG  FSVNRM+S +SVR RL+R+Q LSFLEFNYMILQ+Y
Sbjct: 127 AVMVDNAEWLTKLNYIEMLRDIGRHFSVNRMMSMDSVRMRLERDQELSFLEFNYMILQSY 186

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DFVEL + +  RLQMGGSDQWGNI+ GIDLG R+ TP+L+ALT PLLTT+SG KMGKT +
Sbjct: 187 DFVELNRRFGTRLQMGGSDQWGNIVNGIDLGRRMGTPQLYALTCPLLTTSSGAKMGKTAA 246

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKII 302
           GA+WL+  M SPY++WQ+WRN +DADV  F K  T LP+ EI+R+A LQG EINEAK ++
Sbjct: 247 GAVWLDAGMLSPYDYWQFWRNTEDADVGRFLKLFTLLPLPEIERLAALQGAEINEAKTVL 306

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVK--AG 360
           ATE T ++HG + A  AA  A + F     +Q +PTI +    +  G+G+LT      A 
Sbjct: 307 ATEATALMHGPDAAAAAAETARKTFVEGTLAQSLPTIPVPPAVLEAGLGVLTAFGPDYAK 366

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
              ST+EARR +K   +++N+  +S+EK  ++ +D  + G IKLSFG+K H++  
Sbjct: 367 LVPSTSEARRQIKGGGLRVNDVQVSDEKAVLRKEDLTAEGVIKLSFGRKKHVLLR 421


>gi|323137721|ref|ZP_08072797.1| tyrosyl-tRNA synthetase [Methylocystis sp. ATCC 49242]
 gi|322397018|gb|EFX99543.1| tyrosyl-tRNA synthetase [Methylocystis sp. ATCC 49242]
          Length = 421

 Score =  466 bits (1200), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 216/409 (52%), Positives = 297/409 (72%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           +SDFL +L ERGF+HQ S+   LD     G + AYIG+D TA SLH G L  +M+L WLQ
Sbjct: 8   RSDFLRVLMERGFVHQCSDFAGLDEKALAGGLPAYIGFDCTAPSLHVGSLLPIMMLAWLQ 67

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           +TG KP+ LMGGGT+ +GDPS +DESR+++  ++I  N   I+ +F  F+ +G G TDAL
Sbjct: 68  RTGGKPLPLMGGGTTRVGDPSGKDESRKLLTIEQIDANKASIRRVFERFLTFGDGATDAL 127

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           ML+N  WL  + YI+ LR++G  FSVNRML+ +SV+ RL+RE  LSF+EFNYM LQAYDF
Sbjct: 128 MLDNAEWLAPLNYIEFLRDVGRHFSVNRMLTMDSVKLRLEREHELSFIEFNYMCLQAYDF 187

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           VE+ + +   LQMGGSDQWGNI+ G+DLG R+ TP+L+ALTSPLLTT+SG KMGKT +GA
Sbjct: 188 VEINRRHGALLQMGGSDQWGNIVTGLDLGRRMGTPQLYALTSPLLTTSSGAKMGKTAAGA 247

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WLN +M SPY++WQYWRN +DADV  F K  T LPM E+ R+A L+G EINEAKK +AT
Sbjct: 248 VWLNADMLSPYDYWQYWRNTEDADVARFLKLFTFLPMEEVARLAALEGAEINEAKKTLAT 307

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E T ++HGRE AE+AA  A   F+    +  +P + +S +E++ G+G+L+  VKAG   S
Sbjct: 308 EATALIHGREAAEQAAETARATFEEGALALSLPKVCVSAEEIAAGLGVLSAFVKAGLVAS 367

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
           T EARR +K   +++N+ ++++E+  +  +DF++ G  KLS GKK H++
Sbjct: 368 TGEARRQIKGGGLRVNDVVVTDERGTLNEKDFETDGVAKLSLGKKKHVL 416


>gi|254562151|ref|YP_003069246.1| tyrosine tRNA synthetase [Methylobacterium extorquens DM4]
 gi|254269429|emb|CAX25395.1| tyrosine tRNA synthetase [Methylobacterium extorquens DM4]
          Length = 423

 Score =  466 bits (1199), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 218/415 (52%), Positives = 297/415 (71%), Gaps = 2/415 (0%)

Query: 3   AFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
           A KSDF+ +L ERG+IHQ S+   +D L ++G +T Y GYD TA+SLH GHL  +M+L W
Sbjct: 7   APKSDFIRVLQERGYIHQASDLAGIDALAAEGGLTTYTGYDCTAASLHVGHLLSIMMLHW 66

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD 122
           LQKTG KP+ LMGGGT+ +GDPS RDE+R+++  ++I+ N E IK  FS F+ +G     
Sbjct: 67  LQKTGGKPVVLMGGGTTRVGDPSGRDETRKILTLEQIEANKEGIKQTFSRFLSFGESGNG 126

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
           A+M++N  WL  + YI++LR+IG  FSVNRM+S +SVR RL+R+Q LSFLEFNYMILQ+Y
Sbjct: 127 AVMVDNAEWLTKLNYIEMLRDIGRHFSVNRMMSMDSVRMRLERDQELSFLEFNYMILQSY 186

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DFVEL + +  RLQMGGSDQWGNI+ GIDLG R+ TP+L+ALT PLLTT+SG KMGKT +
Sbjct: 187 DFVELNRRFGTRLQMGGSDQWGNIVNGIDLGRRMGTPQLYALTCPLLTTSSGAKMGKTAA 246

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKII 302
           GA+WL+  M SPY++WQ+WRN +DADV  F K  T LP+ EI+R+A LQG EINEAK ++
Sbjct: 247 GAVWLDAGMLSPYDYWQFWRNTEDADVGRFLKLFTLLPLPEIERLAALQGAEINEAKTVL 306

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVK--AG 360
           ATE T ++HG + A  AA  A + F     +Q +PTI +    +  G+G+LT      A 
Sbjct: 307 ATEATALMHGPDAAAAAAETARKTFVEGTLAQSLPTIPVPPAVLEAGLGVLTAFGPDYAK 366

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
              ST+EARR +K   +++N+  +S+EK  ++ +D  + G IKLSFG+K H++  
Sbjct: 367 LVPSTSEARRQIKGGGLRVNDVQVSDEKAVLRTEDLTAEGVIKLSFGRKKHVLLR 421


>gi|188582413|ref|YP_001925858.1| tyrosyl-tRNA synthetase [Methylobacterium populi BJ001]
 gi|179345911|gb|ACB81323.1| tyrosyl-tRNA synthetase [Methylobacterium populi BJ001]
          Length = 423

 Score =  466 bits (1198), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 221/415 (53%), Positives = 297/415 (71%), Gaps = 2/415 (0%)

Query: 3   AFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
           A KSDF+ +L ERG+IHQ S+   +D L ++G +T Y GYD TA+SLH GHL  +M+L W
Sbjct: 7   APKSDFIRVLQERGYIHQASDLPGIDALAAEGGLTTYTGYDCTAASLHVGHLLSIMMLHW 66

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD 122
           LQKTG KP+ LMGGGT+ +GDPS RDE+R+++  ++I+ N E IK  F+ F+ +G    D
Sbjct: 67  LQKTGGKPVVLMGGGTTRVGDPSGRDEARKILTLEQIEANKEGIKQTFARFLSFGEAGND 126

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
           A+M++N  WL  + YI++LR+IG  FSVNRM+S +SVR RL+R+Q LSFLEFNYMILQ+Y
Sbjct: 127 AVMVDNAEWLTKLNYIEMLRDIGRHFSVNRMMSMDSVRMRLERDQELSFLEFNYMILQSY 186

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DFVEL + +  RLQMGGSDQWGNI+ GIDLG R+ TP+L+ALT PLLTTASG KMGKT +
Sbjct: 187 DFVELNRRFGTRLQMGGSDQWGNIVNGIDLGRRMGTPQLYALTCPLLTTASGAKMGKTAA 246

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKII 302
           GA+WL+  M SPY++WQ+WRN +DADV  F K  T LP+ EI+R+A LQG EINEAK I+
Sbjct: 247 GAVWLDAGMLSPYDYWQFWRNTEDADVGRFLKLFTLLPLPEIERLAALQGAEINEAKTIL 306

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVK--AG 360
           ATE T ++HG E A  AA  A + F     +Q +PTI +    +  G+G+LT      A 
Sbjct: 307 ATEATALMHGAEAATAAAETARKTFVEGTLAQSLPTIPVPSAVLEAGLGVLTAFGPDYAR 366

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
              ST+EARR +K   +++N+  +S+EK  ++  D  + G IKLSFG+K H++  
Sbjct: 367 LVPSTSEARRQIKGGGLRVNDVQVSDEKAVLRPSDLTAEGVIKLSFGRKKHVLLR 421


>gi|240139739|ref|YP_002964216.1| tyrosine tRNA synthetase [Methylobacterium extorquens AM1]
 gi|240009713|gb|ACS40939.1| tyrosine tRNA synthetase [Methylobacterium extorquens AM1]
          Length = 423

 Score =  465 bits (1197), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 218/415 (52%), Positives = 297/415 (71%), Gaps = 2/415 (0%)

Query: 3   AFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
           A KSDF+ +L ERG+IHQ S+   +D L ++G +T Y GYD TA+SLH GHL  +M+L W
Sbjct: 7   APKSDFIRVLQERGYIHQASDLAGIDALAAEGGLTTYTGYDCTAASLHVGHLLSIMMLHW 66

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD 122
           LQKTG KP+ LMGGGT+ +GDPS RDE+R+++  ++I+ N E IK  FS F+ +G     
Sbjct: 67  LQKTGGKPVVLMGGGTTRVGDPSGRDETRKILTLEQIEANKEGIKQTFSRFLSFGESGNG 126

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
           A+M++N  WL  + YI++LR+IG  FSVNRM+S +SVR RL+R+Q LSFLEFNYMILQ+Y
Sbjct: 127 AVMVDNAEWLTKLNYIEMLRDIGRHFSVNRMMSMDSVRMRLERDQELSFLEFNYMILQSY 186

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DFVEL + +  RLQMGGSDQWGNI+ GIDLG R+ TP+L+ALT PLLTT+SG KMGKT +
Sbjct: 187 DFVELNRRFGTRLQMGGSDQWGNIVNGIDLGRRMGTPQLYALTCPLLTTSSGAKMGKTAA 246

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKII 302
           GA+WL+  M SPY++WQ+WRN +DADV  F K  T LP+ EI+R+A LQG EINEAK ++
Sbjct: 247 GAVWLDAGMLSPYDYWQFWRNTEDADVGRFLKLFTLLPLPEIERLAALQGAEINEAKTVL 306

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVK--AG 360
           ATE T ++HG + A  AA  A + F     +Q +PTI +    +  G+G+LT      A 
Sbjct: 307 ATEATALMHGPDAAAAAAETARKTFVEGTLAQSLPTIPVPPAVLEAGLGVLTAFGPDYAK 366

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
              ST+EARR +K   +++N+  +S+EK  ++ +D  + G IKLSFG+K H++  
Sbjct: 367 LVPSTSEARRQIKGGGLRVNDVQVSDEKAVLRKEDLAAEGVIKLSFGRKKHVLLR 421


>gi|163852404|ref|YP_001640447.1| tyrosyl-tRNA synthetase [Methylobacterium extorquens PA1]
 gi|163664009|gb|ABY31376.1| tyrosyl-tRNA synthetase [Methylobacterium extorquens PA1]
          Length = 423

 Score =  465 bits (1196), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 218/415 (52%), Positives = 297/415 (71%), Gaps = 2/415 (0%)

Query: 3   AFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
           A KSDF+ +L ERG+IHQ S+   +D L ++G +T Y GYD TA+SLH GHL  +M+L W
Sbjct: 7   APKSDFIRVLQERGYIHQASDLAGIDALAAEGGLTTYTGYDCTAASLHVGHLLSIMMLHW 66

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD 122
           LQKTG KP+ LMGGGT+ +GDPS RDE+R+++  ++I+ N E IK  FS F+ +G     
Sbjct: 67  LQKTGGKPVVLMGGGTTRVGDPSGRDETRKILTLEQIEANKEGIKQTFSRFLSFGESGNG 126

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
           A+M++N  WL  + YI++LR+IG  FSVNRM+S +SVR RL+R+Q LSFLEFNYMILQ+Y
Sbjct: 127 AVMVDNAEWLTKLNYIEMLRDIGRHFSVNRMMSMDSVRMRLERDQELSFLEFNYMILQSY 186

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DFVEL + +  RLQMGGSDQWGNI+ GIDLG R+ TP+L+ALT PLLTT+SG KMGKT +
Sbjct: 187 DFVELNRRFGTRLQMGGSDQWGNIVNGIDLGRRMGTPQLYALTCPLLTTSSGAKMGKTAA 246

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKII 302
           GA+WL+  M SPY++WQ+WRN +DADV  F K  T LP+ EI+R+A LQG EINEAK ++
Sbjct: 247 GAVWLDAGMLSPYDYWQFWRNTEDADVGRFLKLFTLLPLPEIERLAALQGAEINEAKTVL 306

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVK--AG 360
           ATE T ++HG + A  AA  A + F     +Q +PTI +    +  G+G+LT      A 
Sbjct: 307 ATEATALMHGPDAAAAAAETARKTFVEGTLAQSLPTIPVPSALLEAGLGVLTAFGPDYAK 366

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
              ST+EARR +K   +++N+  +S+EK  ++ +D  + G IKLSFG+K H++  
Sbjct: 367 LVPSTSEARRQIKGGGLRVNDVQVSDEKAVLRKEDLTAEGVIKLSFGRKKHVLLR 421


>gi|170749167|ref|YP_001755427.1| tyrosyl-tRNA synthetase [Methylobacterium radiotolerans JCM 2831]
 gi|170655689|gb|ACB24744.1| tyrosyl-tRNA synthetase [Methylobacterium radiotolerans JCM 2831]
          Length = 423

 Score =  463 bits (1191), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 218/413 (52%), Positives = 295/413 (71%), Gaps = 2/413 (0%)

Query: 3   AFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
           A KSDFL IL+ERG+IHQ S+   +D    +G +T Y+GYD TA SLH GHL  +M+L W
Sbjct: 7   APKSDFLRILTERGYIHQTSDLAGIDAAALEGRLTTYVGYDCTAPSLHVGHLLSIMMLHW 66

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD 122
           LQ TG KPI+LMGGGT+ +GDPS RDE+R+++  ++I  N  +I+  F  F+++G G  D
Sbjct: 67  LQATGGKPIALMGGGTTRVGDPSGRDETRKILTVEQIDANKAEIRKTFDRFLRFGEGAND 126

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
           A+M++N  WL  + YI++LR++G  FSVNRMLS +SVR RL+R+Q LSFLEFNYMILQ+Y
Sbjct: 127 AVMVDNAEWLTKLNYIEMLRDVGRHFSVNRMLSMDSVRLRLERDQELSFLEFNYMILQSY 186

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DFVEL + Y C +QMGGSDQWGNI+ GIDLG R+ TP+L+ALT PLLTT+SG KMGKT +
Sbjct: 187 DFVELNRRYGCVMQMGGSDQWGNIVNGIDLGRRMGTPQLYALTCPLLTTSSGAKMGKTAA 246

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKII 302
           GA+WLN EM  PY++WQ+WRN +DADV  F K  T LPM+EI R+A L G EIN AK ++
Sbjct: 247 GAVWLNPEMLKPYDYWQFWRNTEDADVARFLKLFTLLPMAEIARLAALAGSEINAAKTVL 306

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVK--AG 360
           ATE T ++HGRE AE AA  A + F     +  +P++++    +  G+G+LT      A 
Sbjct: 307 ATEATALMHGREAAEAAAETARKTFVEGTLAADLPSVTVPSATLEAGLGVLTAFGPEVAK 366

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
              ST+EARR +K   +++N+  +++EK  +   D  + G IKLSFGKK H++
Sbjct: 367 LVPSTSEARRQIKGGGLRVNDVPVTDEKAVLGRGDVTADGVIKLSFGKKRHVL 419


>gi|217977779|ref|YP_002361926.1| tyrosyl-tRNA synthetase [Methylocella silvestris BL2]
 gi|254783617|sp|B8EI82|SYY_METSB RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|217503155|gb|ACK50564.1| tyrosyl-tRNA synthetase [Methylocella silvestris BL2]
          Length = 419

 Score =  462 bits (1190), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 217/413 (52%), Positives = 294/413 (71%), Gaps = 1/413 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           +SDFL  L  RG++HQ S+   +D     G + AYIG+D TA SLH G L Q+M+L WLQ
Sbjct: 8   RSDFLQTLLLRGYVHQCSDLEGIDAKAQSGELVAYIGFDCTAPSLHVGSLVQIMMLRWLQ 67

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           KTG KPI+LMGGGT+ +GDPS +DESR+++  + I+ N   I  +FS FI +G GKT AL
Sbjct: 68  KTGGKPIALMGGGTTQVGDPSGKDESRKILSLETIEANKAGIASVFSKFIAFGDGKTQAL 127

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M++N  WL ++KY+D LR++G  FSVNRM++ +SV+ RL+R+Q LSFLEFNYM LQAYDF
Sbjct: 128 MVDNAEWLTALKYVDFLRDVGRHFSVNRMMAMDSVKLRLERDQELSFLEFNYMCLQAYDF 187

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           VEL + Y C LQMGGSDQWGNI+ G+DLG RL  P+L+ALTSPLLTTASG KMGKT  GA
Sbjct: 188 VELNRRYGCVLQMGGSDQWGNIVTGLDLGRRLGAPQLYALTSPLLTTASGAKMGKTAQGA 247

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WLN++M   +++WQ+WRN +D DV  F K  T LP+ E  R+  L G EINEAKKI+AT
Sbjct: 248 VWLNEDMLPVFDYWQFWRNCEDRDVGRFLKLFTELPLDETVRLESLGGAEINEAKKILAT 307

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E T+M HGRE A  A  AA + F+    ++ +P+I I   E+  G+G+L   VKAG   S
Sbjct: 308 EATSMAHGREAALLAEEAARQTFEEGALAESLPSIDIDAAEIEAGLGVLAAFVKAGLVAS 367

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           T+EARR +K   +++N++ +++E+  ++  D  ++G IKLS G+K H++  L 
Sbjct: 368 TSEARRQIKGGGLRVNDAPVADERAALQQGDV-ASGVIKLSLGRKRHVLLKLV 419


>gi|254469446|ref|ZP_05082851.1| tyrosyl-tRNA synthetase [Pseudovibrio sp. JE062]
 gi|211961281|gb|EEA96476.1| tyrosyl-tRNA synthetase [Pseudovibrio sp. JE062]
          Length = 406

 Score =  462 bits (1188), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 214/403 (53%), Positives = 293/403 (72%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           + ERGF+HQ+SN   LD LC+   VTAYIG+D TASSLH G L Q+M+L+W Q+ GH+ I
Sbjct: 1   MEERGFLHQLSNAEGLDELCANETVTAYIGFDCTASSLHVGSLVQIMMLYWFQQAGHRAI 60

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +LMG GT+ +GDP+ +DESR+++  + I++N   IK +F  F+K+G G +DA+M++N  W
Sbjct: 61  TLMGSGTTRVGDPTGKDESRKVLTDETIEDNKNGIKQVFEKFLKFGDGPSDAMMMDNADW 120

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L  + Y+D LR++G +FSVN+M+  +SVR RL+REQ LSFLEFNYM+LQ YD++E+ +  
Sbjct: 121 LLKLNYMDFLRDVGRYFSVNQMIQRDSVRLRLEREQHLSFLEFNYMLLQGYDYLEIHRRT 180

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
            CRLQMGGSDQW NI+ G+DLG RL   +LFALT+PLLTTASG KMGKT +GA+WLN +M
Sbjct: 181 GCRLQMGGSDQWSNILSGVDLGRRLADKELFALTTPLLTTASGAKMGKTAAGAVWLNADM 240

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVH 311
            SPY++WQ+WRN +DADV  F K  T LPM EI R+A L+G  INEAKK++ATE T ++H
Sbjct: 241 LSPYDYWQFWRNTEDADVEKFLKLFTILPMDEIKRLAALEGAGINEAKKVLATEATALLH 300

Query: 312 GREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRH 371
           GREEAEKAA  A + F+   ++  +PTI I+  E++ G+G+L + V AG  TS  E RR+
Sbjct: 301 GREEAEKAAETARKAFEEGANAAGLPTIEIAAAELNDGIGILNVFVTAGLCTSNGEVRRN 360

Query: 372 LKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +K  A++IN+    +   +I   D    G IKLS GKK H++ 
Sbjct: 361 IKGGAVRINDKAEQDHTREITEADLTDDGVIKLSLGKKKHVLV 403


>gi|254502600|ref|ZP_05114751.1| tyrosyl-tRNA synthetase [Labrenzia alexandrii DFL-11]
 gi|222438671|gb|EEE45350.1| tyrosyl-tRNA synthetase [Labrenzia alexandrii DFL-11]
          Length = 417

 Score =  461 bits (1186), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 215/413 (52%), Positives = 298/413 (72%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  FKS+FL +LSERGF+HQIS+P+ LD LC++  VTAYIG+D TA SLHAG L  +M+L
Sbjct: 1   MSEFKSEFLKVLSERGFVHQISDPQGLDELCAKETVTAYIGFDCTAPSLHAGSLVTIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
           +W Q+TGH+PI+LMG GT+ +GDP+ +DESR+++  + I+EN   I+ +F   + +G G 
Sbjct: 61  YWFQQTGHRPIALMGSGTTRVGDPTGKDESRKVLSDETIEENKAGIRKVFEKLLSFGDGP 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           TDALM++N  WL  + Y++ LR+IG  FSVN+M+  +SV+ RL+REQ LSFLEFNYM+LQ
Sbjct: 121 TDALMMDNADWLLKLNYMEFLRDIGRHFSVNQMIQRDSVKLRLEREQHLSFLEFNYMLLQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
            YDF+E+ +   CRLQMGGSDQW NI+ G+DL  R ++ + FALT+PLLTT+SG KMGKT
Sbjct: 181 GYDFLEIYQQTGCRLQMGGSDQWSNILSGVDLIRRKESKEAFALTAPLLTTSSGAKMGKT 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
            +GA+WLN+E  S Y++WQYWRN +DADV  F K  T LP++EI R+A L G  INEAKK
Sbjct: 241 AAGAVWLNEEQLSAYDYWQYWRNTEDADVEKFLKLFTILPLNEISRLAALDGAGINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           ++ATE T M+HGRE+AE AA  A + F+    ++ +PT+ ++  ++  G+G+L   V AG
Sbjct: 301 VLATEATAMIHGREKAEAAAETARKAFEEGQSAEGLPTVEVASADLEAGLGVLNAFVTAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
              S  + RR++K  A+KIN+    +   Q+ L D    G IKLS GKK H++
Sbjct: 361 LCASNGDVRRNIKGGAVKINDKGEQDANRQLTLADVTEDGIIKLSLGKKKHVL 413


>gi|254454555|ref|ZP_05067992.1| tyrosyl-tRNA synthetase [Octadecabacter antarcticus 238]
 gi|198268961|gb|EDY93231.1| tyrosyl-tRNA synthetase [Octadecabacter antarcticus 238]
          Length = 427

 Score =  461 bits (1185), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 221/413 (53%), Positives = 292/413 (70%), Gaps = 3/413 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KSDF+ ++ ERGF+   ++ + LD   + GVV AYIG+D TA SLH G L Q+M+L WLQ
Sbjct: 16  KSDFIRVMIERGFLADCTDYQGLDEAFAAGVVPAYIGFDATAKSLHVGSLIQIMMLRWLQ 75

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD-A 123
           KTGH+PI+LMGGGT+ +GDPSFR + R ++ + +I +NI  IK +F+++I Y TG  + A
Sbjct: 76  KTGHQPITLMGGGTTKVGDPSFRADERPLLTADQIDDNISGIKKVFAAYIDYDTGAANSA 135

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           LMLNN  WL  + Y+D LR+IG  FSVNRMLSFESV+SRL REQSLSFLEFNYMILQAYD
Sbjct: 136 LMLNNAKWLDGLNYLDFLRDIGKHFSVNRMLSFESVKSRLDREQSLSFLEFNYMILQAYD 195

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+EL + Y C+LQMGGSDQWGNI+ GIDL  R+   ++F LTSPLLTT+ G KMGK+LSG
Sbjct: 196 FLELNRRYGCKLQMGGSDQWGNIVNGIDLTRRVLDHQIFGLTSPLLTTSDGKKMGKSLSG 255

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIA 303
           AIWLN E+ S Y FWQ+WRN  DADV  F K  T LP+ E DR+  L+G EINEAK I+A
Sbjct: 256 AIWLNDEILSSYEFWQFWRNTTDADVGRFLKLYTELPVEECDRLGALEGVEINEAKIILA 315

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
            E+T ++HG + A+ A   A E F+       +PT++++  +V+ G+ ++ LIVK+G A 
Sbjct: 316 NEVTALLHGTDAAQAAEKTAKEVFEKGGVGDDLPTLTLATSDVASGISIVQLIVKSGLAG 375

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           S  EA+R +     K+N+ I+++  L I   D  +   IKLS GKK H +  L
Sbjct: 376 SGKEAKRLISEGGAKMNDDILTDAGLMIDAADLATP--IKLSAGKKRHALVQL 426


>gi|220921862|ref|YP_002497163.1| tyrosyl-tRNA synthetase [Methylobacterium nodulans ORS 2060]
 gi|219946468|gb|ACL56860.1| tyrosyl-tRNA synthetase [Methylobacterium nodulans ORS 2060]
          Length = 424

 Score =  459 bits (1181), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 220/413 (53%), Positives = 298/413 (72%), Gaps = 2/413 (0%)

Query: 3   AFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
           A +SDFL +L ERG++HQ S+   +D    +G +TAY+GYD TA SLH GHL  +M+L W
Sbjct: 8   APRSDFLKVLFERGYVHQCSDFAGVDAAAREGRLTAYVGYDCTAPSLHIGHLLSIMMLHW 67

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD 122
           LQ TG KP++LMGGGT+ +GDPS RDESR+++  ++I  N  +I+  F+ F+++G    D
Sbjct: 68  LQATGGKPLALMGGGTTRVGDPSGRDESRKILTLEQIDANKAEIRKTFTRFLRFGKDLRD 127

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
           A+M +N  WL  + YI++LR+IG  FSVNRMLS +SVR RL+R+Q LSFLEFNYMILQAY
Sbjct: 128 AIMADNAEWLTQLNYIEMLRDIGRHFSVNRMLSMDSVRLRLERDQELSFLEFNYMILQAY 187

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DFVEL + Y   LQMGGSDQWGNII GIDLG RL TP+L ALT PL+TTASG KMGKT S
Sbjct: 188 DFVELNRRYGVTLQMGGSDQWGNIITGIDLGRRLGTPQLHALTCPLMTTASGAKMGKTAS 247

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKII 302
           GA+WLN +M SP+++WQ+WRN +DADV  F +  T LP+ EIDR+A L G EINEAKK++
Sbjct: 248 GAVWLNPDMLSPWDYWQFWRNTEDADVGRFLRLFTLLPLDEIDRLAALGGAEINEAKKVL 307

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVK--AG 360
           ATE T ++HGRE AE AA  A   F+     + +PT+ + +  ++ G+G+LT      A 
Sbjct: 308 ATEATALLHGREAAEAAAETARRTFEEGAAPETLPTVEVPRALLAGGLGVLTAFGPDHAK 367

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
              ST+EARR ++S  +K+N++ +++E+  +   D  + G IKLSFG+K H++
Sbjct: 368 LLPSTSEARRQVRSGGLKVNDAAVTDERAVLGEADLTADGVIKLSFGRKKHVL 420


>gi|254437877|ref|ZP_05051371.1| tyrosyl-tRNA synthetase [Octadecabacter antarcticus 307]
 gi|198253323|gb|EDY77637.1| tyrosyl-tRNA synthetase [Octadecabacter antarcticus 307]
          Length = 427

 Score =  457 bits (1177), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 218/413 (52%), Positives = 294/413 (71%), Gaps = 3/413 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KSDF+ ++ ERGF+   ++ + LD   + GVV AYIG+D TA SLH G L Q+M+L WLQ
Sbjct: 16  KSDFIRVMMERGFLADCTDYQGLDDAFAAGVVPAYIGFDATAKSLHVGSLIQIMMLRWLQ 75

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD-A 123
           KTGH+PI+LMGGGT+ +GDPSFR + R ++   +I +NI  IK +F+++IKY TG+ + A
Sbjct: 76  KTGHQPITLMGGGTTKVGDPSFRADERPLLTPDKIDDNISGIKKVFAAYIKYDTGQPNSA 135

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           LMLNN  WL  + Y+D LR+IG  FSVNRMLSFESV+SRL REQSLSFLEFNYMILQAYD
Sbjct: 136 LMLNNAEWLDDLNYLDFLRDIGKHFSVNRMLSFESVKSRLDREQSLSFLEFNYMILQAYD 195

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+EL + Y C+LQMGGSDQWGNI+ GIDL  R+   ++F LTSPLLTT+ G KMGK+LSG
Sbjct: 196 FLELNRRYGCKLQMGGSDQWGNIVNGIDLTRRVLDHQIFGLTSPLLTTSDGKKMGKSLSG 255

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIA 303
           AIWLN EM S Y FWQ+WRN  D+DV  F K  T LP++E DR+  L+G +IN AK ++A
Sbjct: 256 AIWLNDEMLSSYEFWQFWRNTTDSDVGRFLKLYTELPVAECDRLGALEGADINGAKIVLA 315

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
            E+TT++HG++ A+ A   A E F+       +PT++++  ++  G+ ++ LIVK+G A 
Sbjct: 316 NEVTTLLHGKDAAQAAEKTAKEVFEKGGIGDDLPTLTLAASDLVDGISIVQLIVKSGLAG 375

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           S  EA+R +     KIN+ ++++    I   D ++   IKLS GKK H +  L
Sbjct: 376 SGKEAKRLISDGGAKINDDMLTDAGRMITAADLETP--IKLSAGKKRHALVQL 426


>gi|158425243|ref|YP_001526535.1| tyrosyl-tRNA synthetase [Azorhizobium caulinodans ORS 571]
 gi|158332132|dbj|BAF89617.1| tyrosyl-tRNA synthetase [Azorhizobium caulinodans ORS 571]
          Length = 437

 Score =  454 bits (1167), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 223/434 (51%), Positives = 296/434 (68%), Gaps = 20/434 (4%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M   +SDFL  L ERG+IHQ S+   LD   S+G +TAYIG+D TASSLHAGHL  +M+L
Sbjct: 1   MTTLRSDFLRTLQERGYIHQCSDLERLDAKASEGPITAYIGFDATASSLHAGHLLSIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY-GTG 119
             LQ+TGH+PI+LMGGGT+ IGDPS +DE+R+M+   +I ENI  I+ +F+ F+ + G+ 
Sbjct: 61  RTLQRTGHRPIALMGGGTTKIGDPSGKDEARKMLTDAQINENIASIRKVFARFLDFEGSP 120

Query: 120 K-------------------TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           K                     A+M NN  WL  +KYI LLRE+G  F++NRML+F+SV+
Sbjct: 121 KGYARFARAVDGKWNEEPRLLPAIMENNANWLDELKYIPLLREVGPHFTINRMLTFDSVK 180

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            RL+REQ L+FLEFNYMILQAYDFVEL K + C LQMGGSDQWGNI+ G++LG R+    
Sbjct: 181 LRLEREQPLTFLEFNYMILQAYDFVELNKRHGCTLQMGGSDQWGNIVNGMELGRRMHGAD 240

Query: 221 LFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLP 280
           LFALT+PLLTT+SG KMGKT  GA+WL+  + SPY +WQYWRN  DADV  F K  T LP
Sbjct: 241 LFALTTPLLTTSSGAKMGKTAGGAVWLDAALLSPYEYWQYWRNTGDADVERFLKLFTELP 300

Query: 281 MSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS 340
           + EI R+A L G+EIN AK ++ATE T ++HGR  AE+A   A   F+    S ++PTI 
Sbjct: 301 LDEIARLAALGGQEINHAKDVLATEATALLHGRAAAEEAKATARATFEEGALSTNLPTIE 360

Query: 341 ISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG 400
           I   ++  G+   +  V AG   ST+EARR +KS  +K+N++ +++EKL +  +D  + G
Sbjct: 361 IPAADLKAGLAANSAFVTAGLVPSTSEARRQIKSGGLKVNDATVTDEKLVLGERDLTAEG 420

Query: 401 NIKLSFGKKNHIIC 414
            IKLS GKK H++ 
Sbjct: 421 VIKLSMGKKKHVLV 434


>gi|159044694|ref|YP_001533488.1| tyrosyl-tRNA synthetase [Dinoroseobacter shibae DFL 12]
 gi|189083648|sp|A8LQM0|SYY_DINSH RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|157912454|gb|ABV93887.1| tyrosyl-tRNA synthetase [Dinoroseobacter shibae DFL 12]
          Length = 417

 Score =  452 bits (1164), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 216/409 (52%), Positives = 290/409 (70%), Gaps = 2/409 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KSDF+ ++ ERGF+   ++ + LD   S+GVV  YIGYD TA+SLH GHL  +M+L WLQ
Sbjct: 6   KSDFMRVMMERGFLADCTDYQGLDEAMSKGVVPTYIGYDATAASLHVGHLLNIMMLRWLQ 65

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           KTGHKPI+LMGGGT+ +GDPSFR + R ++ +++I  NI  +K +FSS++ YG G TDAL
Sbjct: 66  KTGHKPITLMGGGTTKVGDPSFRSDERPLLGAEQIDANIAGMKQVFSSYLTYGDGPTDAL 125

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           MLNN  WL  + Y++ LR++G  FSVNRMLSFESV+SRL REQSLSFLEFNYMILQAYDF
Sbjct: 126 MLNNAEWLDGLNYLEFLRDVGRHFSVNRMLSFESVKSRLDREQSLSFLEFNYMILQAYDF 185

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL + Y CRLQMGGSDQWGNI+ GIDL  R+   +++ LTSPLLTT+ G KMGK+  GA
Sbjct: 186 MELNRRYGCRLQMGGSDQWGNIVNGIDLTRRILDQEVYGLTSPLLTTSDGRKMGKSQGGA 245

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           IWLN +M SPY FWQ+WRN  DADV  F K  T LP+ E DR+  L G EIN+AK I+A 
Sbjct: 246 IWLNGDMLSPYEFWQFWRNTTDADVGRFLKLYTELPLEECDRLGALAGSEINDAKIILAN 305

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
            +T ++HG E A+ A   A E F+     + +PT++++ DE+  G+ ++ LI ++G A S
Sbjct: 306 AVTALLHGPEAAQAAEATAREVFEKGGAGEDLPTLTLTTDEIGDGISVVQLITRSGLAKS 365

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
             EA+R +  N  K++++ +++  L I      +   IKLS G+K H +
Sbjct: 366 GKEAKRLIAENGAKLDDAPLTDAGLMIDADRLAAP--IKLSAGRKRHAL 412


>gi|84684873|ref|ZP_01012773.1| tyrosyl-tRNA synthetase [Maritimibacter alkaliphilus HTCC2654]
 gi|84667208|gb|EAQ13678.1| tyrosyl-tRNA synthetase [Rhodobacterales bacterium HTCC2654]
          Length = 421

 Score =  451 bits (1160), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 215/412 (52%), Positives = 288/412 (69%), Gaps = 2/412 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KSDF+ ++ ERG++   ++ + LD   + GVVTAYIGYD TA SLH GHL  +M+L WLQ
Sbjct: 11  KSDFMRVMIERGYLADCTDYQALDEALTNGVVTAYIGYDATAKSLHVGHLLNIMMLRWLQ 70

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           KTGHKPI+LMGGGT+ +GDPSFR + R ++  ++I  NI+ +K +F+ ++ YG G++DAL
Sbjct: 71  KTGHKPITLMGGGTTKVGDPSFRSDERPLLGPEQIDANIDGMKQVFAKYLSYGDGESDAL 130

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           MLNN  WL  + Y++ LR+IG  FSVNRMLSFESV+SRL REQSLSFLEFNYMILQAYDF
Sbjct: 131 MLNNAEWLDGLNYLEFLRDIGRHFSVNRMLSFESVKSRLDREQSLSFLEFNYMILQAYDF 190

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL + Y C LQMGGSDQWGNI+ GIDL  R+   +++ LTSPLLTT+ G KMGK+  GA
Sbjct: 191 LELNRRYGCTLQMGGSDQWGNIVNGIDLTRRVLDHEIYGLTSPLLTTSDGKKMGKSQGGA 250

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WLN +M SPY FWQ+WRN  DADV  F K  T L + E +R+A L G  INEAK ++A 
Sbjct: 251 MWLNADMLSPYEFWQFWRNTTDADVGRFLKLYTELSVEECERLAALPGNRINEAKIVLAN 310

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E+TT+ HG E A  A   A E F+       +PT++++ DE+  G+ +  LI ++G A +
Sbjct: 311 EVTTLCHGAEAAAAAEATAREVFEKGGAGDDLPTLTLTADEIGDGISITQLITRSGLAKT 370

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             EA+R +     K+N++ +++  L I   D D+   IKLS GKK H +  L
Sbjct: 371 GKEAKRLIADKGAKLNDADVTDAGLMITAADLDAP--IKLSAGKKRHALVTL 420


>gi|83951809|ref|ZP_00960541.1| tyrosyl-tRNA synthetase [Roseovarius nubinhibens ISM]
 gi|83836815|gb|EAP76112.1| tyrosyl-tRNA synthetase [Roseovarius nubinhibens ISM]
          Length = 417

 Score =  451 bits (1159), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 214/412 (51%), Positives = 285/412 (69%), Gaps = 2/412 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KS+F+SI+  RGF+   ++ + LD     GVV +YIGYD TA SLH GHL  +M+L WLQ
Sbjct: 6   KSEFISIMISRGFLADCTDYQGLDEAMQAGVVPSYIGYDATAQSLHVGHLLNIMMLRWLQ 65

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           K+GHKPI+LMGGGT+ +GDPSFR + R ++  ++I  NI  +  +FS ++ YG G+TDA+
Sbjct: 66  KSGHKPITLMGGGTTKVGDPSFRSDERPLLGPEQIDANIRGMGQVFSRYLSYGEGETDAI 125

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           MLNN  WL  + Y++ LR+IG  FSVNRMLSFESV+SRL REQSLSFLEFNYMILQAYDF
Sbjct: 126 MLNNAEWLDDLNYLEFLRDIGRHFSVNRMLSFESVKSRLDREQSLSFLEFNYMILQAYDF 185

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL + Y C LQMGGSDQWGNI+ GIDL  R+   +++ LTSPLLTT+ G KMGK+  GA
Sbjct: 186 LELNRRYGCLLQMGGSDQWGNIVNGIDLTRRVIDHEVYGLTSPLLTTSDGRKMGKSQGGA 245

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           IWLN +M SPY FWQ+WRN  DAD   F K  T LP+ E DR+  L G EINEAK I+A 
Sbjct: 246 IWLNGDMLSPYEFWQFWRNTTDADTGRFLKLYTELPVEECDRLGALAGSEINEAKIILAN 305

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E+T ++HG E A+ A   A E F+       +PT+++S  E+  G+ ++ L+VK G A S
Sbjct: 306 EVTALLHGAEAAQAAQDTAREVFEKGGVGDDLPTVTLSPAEIEGGISVVQLLVKTGLAKS 365

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             EA+R +  N  +++++ +++  L +    F +   IKLS GKK H +  L
Sbjct: 366 GKEAKRLISENGARLDDAPLTDAGLMLDSGAFAAP--IKLSAGKKRHALVKL 415


>gi|83312134|ref|YP_422398.1| tyrosyl-tRNA synthetase [Magnetospirillum magneticum AMB-1]
 gi|97201574|sp|Q2W2T6|SYY_MAGMM RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|82946975|dbj|BAE51839.1| Tyrosyl-tRNA synthetase [Magnetospirillum magneticum AMB-1]
          Length = 415

 Score =  451 bits (1159), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 219/414 (52%), Positives = 289/414 (69%), Gaps = 2/414 (0%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M + KSDFL I++ERG++HQ ++   LD   ++G   AYIG+D TA+SLH G L Q+MLL
Sbjct: 1   MTSLKSDFLRIVTERGYMHQCTDLEALDKRLTEGCQAAYIGFDCTATSLHVGGLMQIMLL 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            W QKTGHKPI LMGGGT+ IGDP+ +DESR+M+  + I  N+  IK +F+ ++ +G GK
Sbjct: 61  RWWQKTGHKPIVLMGGGTTRIGDPTGKDESRKMLTDEVIATNMAGIKTVFTKYLTFGEGK 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           TDALM+NN  WL  + YID LR+ G  F++NRML+F+SV+ RL+REQ L+FLEFNYM+LQ
Sbjct: 121 TDALMVNNADWLDKLNYIDFLRDYGHHFTINRMLTFDSVKLRLEREQPLTFLEFNYMLLQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
            YDFVEL +   C LQMGGSDQWGNII G++LG R    +LF LTSPLLTT+SG KMGKT
Sbjct: 181 GYDFVELFRRNRCILQMGGSDQWGNIINGVELGRRADQAELFGLTSPLLTTSSGAKMGKT 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           ++GA+WLN +M S + FWQYWRN +DADV  F K  T LP+ EI R+ KL+G EINEAKK
Sbjct: 241 VNGAVWLNDDMLSAWEFWQYWRNTEDADVGRFLKLYTELPLDEIARLEKLEGAEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+A E+T + HG   A +AA  A + F+  + S  +PT+ I   E++ G+    L V+AG
Sbjct: 301 ILANEVTRLCHGDAAALQAAETARQTFEQGVASSDLPTVEIPAAELAAGIPAFALFVRAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            A S  EARR LK    K+N+  + +E   +   D    G +KL+ GKK HI+ 
Sbjct: 361 LAASNGEARRLLKGGGGKVNDQAV-DEAHPVGSNDL-RDGAVKLTAGKKRHILV 412


>gi|307295465|ref|ZP_07575301.1| tyrosyl-tRNA synthetase [Sphingobium chlorophenolicum L-1]
 gi|306878504|gb|EFN09724.1| tyrosyl-tRNA synthetase [Sphingobium chlorophenolicum L-1]
          Length = 405

 Score =  449 bits (1154), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 211/411 (51%), Positives = 281/411 (68%), Gaps = 11/411 (2%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M ++ SD L +L  RG+IHQ+++   LD L ++ +V  YIG+D TA SLH GHL  +M+L
Sbjct: 1   MTSYSSDLLRLLETRGYIHQLTDAEGLDALAARQIVPGYIGFDPTAPSLHVGHLVSIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             LQK GHKPI LMGGGT  IGDPSF+DE+R+++ +  I EN+  IK +F  F+ +G G 
Sbjct: 61  RQLQKAGHKPIVLMGGGTGKIGDPSFKDEARKLLTTDLIAENVASIKRVFERFLTFGDGP 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           TDA+ML+N  WL  ++YI  LR+IG  FSVNRMLSF+SV+ RL REQSLSFLEFNYMILQ
Sbjct: 121 TDAIMLDNAEWLDRLEYIPFLRDIGQHFSVNRMLSFDSVKLRLDREQSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDF+EL++   CRLQMGGSDQWGNI+ G++L  R+   ++F LT+PLLT A GTKMGKT
Sbjct: 181 AYDFLELSRRSACRLQMGGSDQWGNIVNGVELARRVDGTQVFGLTTPLLTNADGTKMGKT 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           + GA+WLN++  S Y++WQ+WRN  DADV +  +  T LPM E++R+A LQG EINEAKK
Sbjct: 241 VGGAVWLNEDQLSNYDYWQFWRNTADADVANRLRLFTDLPMDEVERLASLQGAEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+A E T +  G E A  AA  A + F+      ++PT+S+     + G+ ++      G
Sbjct: 301 ILANEATALCRGAEAAVLAAETARKTFEEGASDANLPTVSLG----AEGLNIVQGTTALG 356

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           FA S  E RR L   AI++N  ++S+  L +K  D       KLSFG K H
Sbjct: 357 FAASNKEVRRKLAEGAIRVNGEVVSDPALTLKAGD-------KLSFGAKKH 400


>gi|46202551|ref|ZP_00053020.2| COG0162: Tyrosyl-tRNA synthetase [Magnetospirillum magnetotacticum
           MS-1]
          Length = 415

 Score =  449 bits (1154), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 218/414 (52%), Positives = 289/414 (69%), Gaps = 2/414 (0%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M + KSDFL I++ERG++HQ ++   LD   ++G   AYIG+D TA+SLH G L Q+MLL
Sbjct: 1   MTSLKSDFLRIVTERGYMHQCTDLEALDKRLTEGCQAAYIGFDCTATSLHVGGLMQIMLL 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            W QKTGHKPI LMGGGT+ IGDP+ +DESR+M+  + I  N+  IK +F+ ++ +G G+
Sbjct: 61  RWWQKTGHKPIVLMGGGTTRIGDPTGKDESRKMLTDEVIATNMAGIKTVFTKYLTFGDGQ 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           TDALM+NN  WL  + YID LR+ G  F++NRML+F+SV+ RL+REQ L+FLEFNYM+LQ
Sbjct: 121 TDALMVNNADWLDKLNYIDFLRDYGHHFTINRMLTFDSVKLRLEREQPLTFLEFNYMLLQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
            YDFVEL +   C LQMGGSDQWGNII G++LG R    +LF LTSPLLTT+SG KMGKT
Sbjct: 181 GYDFVELYRRNKCILQMGGSDQWGNIINGVELGRRADQAELFGLTSPLLTTSSGAKMGKT 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           ++GA+WLN +M S + FWQYWRN +DADV  F K  T LP+ EI R+ KL+G EINEAKK
Sbjct: 241 VNGAVWLNDDMLSAWEFWQYWRNTEDADVGRFLKLYTELPLDEIARLEKLEGAEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+A E+T + HG   A +AA  A + F+  + +  +PTI I   E++ G+    L V+AG
Sbjct: 301 ILANEVTRLCHGEAAAIQAAETARKTFEEGMAATDLPTIEIPAAELAAGIPAFALFVRAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            A S  EARR LK    K+N+  + +E   +   D    G +KL+ GKK HI+ 
Sbjct: 361 LAASNGEARRLLKGGGGKVNDQAV-DEARPVGSADLKD-GAVKLTAGKKRHILV 412


>gi|221638906|ref|YP_002525168.1| Tyrosyl-tRNA synthetase [Rhodobacter sphaeroides KD131]
 gi|254783626|sp|B9KQU0|SYY_RHOSK RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|221159687|gb|ACM00667.1| Tyrosyl-tRNA synthetase [Rhodobacter sphaeroides KD131]
          Length = 416

 Score =  448 bits (1152), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 213/412 (51%), Positives = 280/412 (67%), Gaps = 2/412 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KSDFL ++ ERG++   ++ + LD   S+GVV AYIGYD TA+SLH GHL  +M+L WLQ
Sbjct: 6   KSDFLRVMQERGYLADCTDKQALDEALSKGVVPAYIGYDATAASLHVGHLLNIMMLRWLQ 65

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           KTGHKPI+LMGGGT+ +GDPSFR E R ++   +I ENIE ++ +F+ ++ YG G TDAL
Sbjct: 66  KTGHKPITLMGGGTTKVGDPSFRSEERPLLTPDKIDENIEGMRKVFARYLSYGEGATDAL 125

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           MLNN  WL  + Y+D LR+IG  FSVNRMLSFESV+SRL REQSLSFLEFNYMILQAYDF
Sbjct: 126 MLNNAEWLDHLNYLDFLRDIGRHFSVNRMLSFESVKSRLDREQSLSFLEFNYMILQAYDF 185

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL + Y CRLQMGGSDQWGNI+ GIDL  R+   ++F LTSPLLTT+ G KMGK+  GA
Sbjct: 186 LELFRRYGCRLQMGGSDQWGNIVNGIDLTRRVLEGEIFGLTSPLLTTSDGRKMGKSAGGA 245

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WLN EM +PY+FWQ+WRN  DADV  F K  T LP+ E DR+  LQG EIN AK ++A 
Sbjct: 246 VWLNGEMLAPYDFWQFWRNTTDADVGRFLKLYTELPVEECDRLGALQGSEINAAKILLAN 305

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E+TT++HGR+ AE A   A   F+       +  + +    +  G+ +   +V AG   S
Sbjct: 306 EVTTLLHGRDAAEAAEATARAVFEEGGVGGALEVVELPATTLGEGLSVAHFLVAAGLVAS 365

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             EA+R +  + ++ NN  + +    +          +K+S G+K H +  L
Sbjct: 366 GKEAKRLVAESGLRFNNEPVGDANAPVTAATVGE--ELKVSIGRKKHKLVRL 415


>gi|170743905|ref|YP_001772560.1| tyrosyl-tRNA synthetase [Methylobacterium sp. 4-46]
 gi|168198179|gb|ACA20126.1| tyrosyl-tRNA synthetase [Methylobacterium sp. 4-46]
          Length = 426

 Score =  448 bits (1152), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 215/413 (52%), Positives = 290/413 (70%), Gaps = 2/413 (0%)

Query: 3   AFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
           A +S+FL +L ERG++HQ S+   +D    +G +TAY+GYD TA SLH GHL  +M+L W
Sbjct: 10  APRSEFLKVLIERGYVHQCSDFAGVDEAAREGRLTAYVGYDCTAPSLHIGHLLSIMMLHW 69

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD 122
           LQ TG  P++LMGGGT+ +GDPS RDE+RR++  ++I  N  +I   F+ F+++G     
Sbjct: 70  LQATGGTPVALMGGGTTRVGDPSGRDETRRILTVEQIDANKAEIGKTFARFLRFGEAAGL 129

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
           A M +N  WL  + YI++LRE+G  FSVNRMLS +SVR RL+R+Q LSFLEFNYMILQAY
Sbjct: 130 ARMADNAEWLTQLNYIEMLREVGRHFSVNRMLSMDSVRLRLERDQELSFLEFNYMILQAY 189

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DFVEL + Y   LQMGGSDQWGNI+ GIDLG RL TP+L ALT PL+TTASG KMGKT S
Sbjct: 190 DFVELNRRYGVTLQMGGSDQWGNIVTGIDLGRRLGTPQLHALTCPLMTTASGAKMGKTAS 249

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKII 302
           GA+WLN ++ SP+ +WQ+WRN +DADV  F +  T LP+ E DR+A L G EINEAKK++
Sbjct: 250 GAVWLNPDLLSPWEYWQFWRNTEDADVGRFLRLFTLLPLPETDRLAALGGAEINEAKKVL 309

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVK--AG 360
           ATE T ++HGRE AE AA  A   F+     + +PT+ I +  ++ G+G+L       A 
Sbjct: 310 ATEATALLHGREAAEAAAETARRTFEEGAAPETLPTVEIPRAALAAGLGVLAAFGPDHAK 369

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
              ST+EARR ++S  +K+N++ +S+E+  +   D    G IKLSFG+K H++
Sbjct: 370 LLPSTSEARRQVRSGGLKVNDAAVSDERAVLGEGDLTGDGVIKLSFGRKKHVL 422


>gi|84515615|ref|ZP_01002977.1| tyrosyl-tRNA synthetase [Loktanella vestfoldensis SKA53]
 gi|84510898|gb|EAQ07353.1| tyrosyl-tRNA synthetase [Loktanella vestfoldensis SKA53]
          Length = 416

 Score =  447 bits (1150), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 216/415 (52%), Positives = 286/415 (68%), Gaps = 8/415 (1%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KSDF+S++ ERGF+   ++ + LD   S+GVVT YIGYD TA SLH GHL  +M+L WLQ
Sbjct: 6   KSDFMSVMMERGFLADCTDYQGLDDALSRGVVTTYIGYDATAKSLHVGHLLNIMMLRWLQ 65

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           KTGH+PI+LMGGGT+ +GDPSFR + R ++ + +I  NI  ++ +F+ ++ YG G TDAL
Sbjct: 66  KTGHQPITLMGGGTTKVGDPSFRADERPLLTADQIDANIAGMQQVFAKYLTYGDGPTDAL 125

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           MLNN  WL  + Y+D LR+IG  FSVNRML+FESV+SRL REQSLSFLEFNYMILQAYDF
Sbjct: 126 MLNNAEWLDQLNYLDFLRDIGRHFSVNRMLAFESVKSRLDREQSLSFLEFNYMILQAYDF 185

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL + Y C LQMGGSDQWGNII GIDL  R+   +++ LTSPLLTT+ G KMGK+  GA
Sbjct: 186 LELNRRYGCLLQMGGSDQWGNIINGIDLTRRVLDHEIYGLTSPLLTTSDGRKMGKSAGGA 245

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WLN +M SPY FWQ+WRN  DAD   F K  T LP+ E +R+  LQG +IN AK I+A 
Sbjct: 246 VWLNADMLSPYEFWQFWRNTTDADTGRFLKLYTELPLDECNRLGALQGSDINAAKIILAN 305

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E+T ++HG E A  A   A E F+       +PT+++   E+  GM +  +IV+AG A +
Sbjct: 306 EVTALLHGAEAATTAEATAREVFEKGGVGDDLPTLTLGAAELGDGMSIAQIIVRAGLAAT 365

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDST---GNIKLSFGKKNHIICHL 416
             EA+R +  N  ++N+  +++  L +     D+T     IKLS GKK H +  L
Sbjct: 366 GKEAKRLIAENGARLNDEPLTDAGLMV-----DATMLAQPIKLSAGKKRHALVQL 415


>gi|126735683|ref|ZP_01751428.1| tyrosyl-tRNA synthetase, putative [Roseobacter sp. CCS2]
 gi|126714870|gb|EBA11736.1| tyrosyl-tRNA synthetase, putative [Roseobacter sp. CCS2]
          Length = 416

 Score =  447 bits (1149), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 213/412 (51%), Positives = 287/412 (69%), Gaps = 2/412 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KSDF++++  RGF+   ++ + LD   S+GVV AYIG+D TA SLH G L Q+M++ WLQ
Sbjct: 6   KSDFMNVMMTRGFLADCTDYQGLDEALSKGVVPAYIGFDATAKSLHVGSLIQIMMMRWLQ 65

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           KTGHKPI+LMGGGT+ +GDPSFR + R ++   +I +NI  IK +FS+++ YG   TDAL
Sbjct: 66  KTGHKPITLMGGGTTKVGDPSFRADERPLLGPDQIDDNIAGIKQVFSAYLTYGDAPTDAL 125

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M+NN  WL  + Y+D LR+IG  FS+NRMLSFESV+SRL REQSLSFLEFNYMILQAYDF
Sbjct: 126 MINNAEWLDGLNYLDFLRDIGRHFSINRMLSFESVKSRLDREQSLSFLEFNYMILQAYDF 185

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL + Y C LQMGGSDQWGNI+ GIDL  R+   +++ LTSPLLTT+ G KMGK+ SGA
Sbjct: 186 LELNRRYGCLLQMGGSDQWGNIVNGIDLTRRVLDQEIYGLTSPLLTTSDGKKMGKSQSGA 245

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WLN +M +PY FWQ+WRN  DAD   F K  T LP+ E +R+  L+G +IN AK I+A 
Sbjct: 246 VWLNADMCAPYEFWQFWRNTTDADTGRFLKLYTELPIEECERLGALEGSDINAAKIILAN 305

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E+TT++HG   A+ A   A E F+       +PT+++S D++  G+ ++ LIVK+G A S
Sbjct: 306 EVTTLLHGAAAAQAAEATAREVFEKGGVGDDLPTLTLSADDLGDGISIVQLIVKSGLAKS 365

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             EA+R +  N  K+N++ +    + I      +   IKLS GKK H +  L
Sbjct: 366 GKEAKRLIAENGAKLNDAPLHEAGMMIDADALSTP--IKLSAGKKRHALVQL 415


>gi|149913839|ref|ZP_01902371.1| tyrosyl-tRNA synthetase [Roseobacter sp. AzwK-3b]
 gi|149812123|gb|EDM71954.1| tyrosyl-tRNA synthetase [Roseobacter sp. AzwK-3b]
          Length = 416

 Score =  446 bits (1148), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 216/413 (52%), Positives = 284/413 (68%), Gaps = 2/413 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KSDFL ++ ERGF+   ++ + LD   + G VTAYIGYD TA SLH GHL  +M+L WLQ
Sbjct: 6   KSDFLRVMIERGFLADCTDLQALDDSLTSGTVTAYIGYDATAKSLHVGHLLNIMMLRWLQ 65

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           KTGH+PI+LMGGGT+ +GDPSFR + R ++   +I ENI  ++ +F+ ++ YG     AL
Sbjct: 66  KTGHRPITLMGGGTTKVGDPSFRSDERPLLDEAQIAENIGGMQQVFARYLDYGDTAPGAL 125

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           MLNN  WL  +KYI+ LR+IG +FSVNRMLSFESV+SRL REQSLSFLEFNYMILQAYDF
Sbjct: 126 MLNNAEWLDGLKYIEFLRDIGRYFSVNRMLSFESVKSRLDREQSLSFLEFNYMILQAYDF 185

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL + Y C LQMGGSDQWGNI+ GIDL  R+   +++ LTSPLLTTA G KMGK+  GA
Sbjct: 186 LELNRRYGCTLQMGGSDQWGNIVNGIDLTRRVVAHEVYGLTSPLLTTADGRKMGKSAGGA 245

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WLN +M SPY FWQ+WRN  DADV  F K  T LP+ E DR++ L G EIN AK I+A 
Sbjct: 246 VWLNADMLSPYEFWQFWRNTLDADVGRFLKLYTELPVEECDRLSALAGSEINAAKIILAN 305

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E+TT++HG + A  A   A E F+       +PT+ ++ DE++ GM ++ L V+ G A S
Sbjct: 306 EVTTLLHGADAARTAEATAREVFEKGGVGDDLPTLELTMDELAEGMSIVQLFVRTGLAKS 365

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
             +A+R +     +I+++ +++  L I      S   IKLS GKK H +  L 
Sbjct: 366 GKDAKRLIAEQGARIDDAPLTDSGLMIDAAALASP--IKLSAGKKRHALVKLA 416


>gi|99080764|ref|YP_612918.1| tyrosyl-tRNA synthetase [Ruegeria sp. TM1040]
 gi|123379010|sp|Q1GI60|SYY_SILST RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|99037044|gb|ABF63656.1| tyrosyl-tRNA synthetase [Ruegeria sp. TM1040]
          Length = 417

 Score =  446 bits (1148), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 220/414 (53%), Positives = 284/414 (68%), Gaps = 2/414 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KSDF++I+ ERGF+   ++ + LD     G  TAYIGYD TA SLH GHL  +M+L WLQ
Sbjct: 6   KSDFIAIMMERGFLADCTDYQGLDEALVSGTQTAYIGYDATAQSLHVGHLLNIMMLRWLQ 65

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           KTGH+PI+LMGGGT+ +GDPSFR + R ++  ++I  NI  ++ +F+ ++ Y   K  A+
Sbjct: 66  KTGHRPITLMGGGTTKVGDPSFRSDERPLLGPEQIDANIAGMQKVFAKYLDYSDAKNGAM 125

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           MLNN  WL  + Y++ LR+IG  FSVNRMLSFESV+SRL REQSLSFLEFNYMILQAYDF
Sbjct: 126 MLNNAEWLDGLNYLEFLRDIGRHFSVNRMLSFESVKSRLDREQSLSFLEFNYMILQAYDF 185

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL + Y C LQMGGSDQWGNI+ GIDL  R+   +++ LTSPLLTT+ G KMGK+  GA
Sbjct: 186 LELNRRYGCVLQMGGSDQWGNIVNGIDLTRRVLENEIYGLTSPLLTTSDGRKMGKSQGGA 245

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           IWLN EM SPY FWQ+WRN  DADV  F K  T LP+ E DR+  LQG EINE K I+A 
Sbjct: 246 IWLNDEMLSPYEFWQFWRNTTDADVGRFLKLYTELPVEECDRLGALQGSEINEGKIILAN 305

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E+TT++HG E A  A   A E F+       +PT+S+S  E+  GM ++ LIVK+G A S
Sbjct: 306 EVTTLLHGAEAARAAEATAREVFEKGGVGDDLPTLSLSPAELGDGMSIVQLIVKSGLAKS 365

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLCG 418
             EA+R +  N  K++++ +++  L I      S   IKLS GKK H +  L G
Sbjct: 366 GKEAKRLISENGAKLDDAPLTDAGLMIDAAALASP--IKLSAGKKRHALVQLEG 417


>gi|144898140|emb|CAM75004.1| tyrosyl-tRNA synthetase [Magnetospirillum gryphiswaldense MSR-1]
          Length = 421

 Score =  446 bits (1147), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 211/414 (50%), Positives = 286/414 (69%), Gaps = 1/414 (0%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M   +S+FL +++ERG++HQ ++   LD   +QG   AYIG+D TA SLH G L Q+MLL
Sbjct: 6   MTTARSEFLRVVAERGYMHQCTDLEALDKRLNQGPAAAYIGFDCTAESLHVGGLMQIMLL 65

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            W QKTG+KPI LMGGGT+ IGDP+ +DE+R+M+    I  N+  IK +F+ ++ +G G 
Sbjct: 66  RWWQKTGNKPIVLMGGGTTRIGDPTGKDEARKMLDDAAIAHNMAGIKQVFAKYLTFGDGA 125

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           TDA+M+NN  WL  + YI  LR+ G  F++NRML+F+SV+ RL+REQ L+FLEFNYMILQ
Sbjct: 126 TDAMMVNNADWLDQLNYISFLRDYGKHFTINRMLTFDSVKLRLEREQPLTFLEFNYMILQ 185

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
            YDF EL   + C LQMGGSDQWGNII G++LG R+   +LF LTSPLLTT+SG KMGKT
Sbjct: 186 GYDFAELWSRHKCVLQMGGSDQWGNIINGVELGRRVHQAELFGLTSPLLTTSSGAKMGKT 245

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           + GA+WLN +M S + FWQYWRN +DADV  F K  T LPM EI R+  LQG EINEAKK
Sbjct: 246 VGGAVWLNADMLSAWEFWQYWRNTEDADVGRFLKLYTELPMEEIARLEALQGAEINEAKK 305

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+A E+T + HG E A +AA  A + F+    S ++PTI+I   +++ G+    L V+AG
Sbjct: 306 ILAHEVTKLCHGEESAREAAETARKTFEQGGVSDNLPTIAIPAADLNAGIPAFALFVRAG 365

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +TS  EARR L+    ++N++ +++    I   D    G IKL+ GKK +++ 
Sbjct: 366 LSTSNGEARRLLQQGGGRVNDAQVTDPAAPIG-ADALKDGVIKLTAGKKRNVLV 418


>gi|77463048|ref|YP_352552.1| tyrosyl-tRNA synthetase [Rhodobacter sphaeroides 2.4.1]
 gi|97201873|sp|Q3J3I3|SYY_RHOS4 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|77387466|gb|ABA78651.1| tyrosyl-tRNA synthetase [Rhodobacter sphaeroides 2.4.1]
          Length = 416

 Score =  445 bits (1145), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 213/412 (51%), Positives = 278/412 (67%), Gaps = 2/412 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KSDFL ++ ERG++   ++ + LD   S+GVV AYIGYD TA+SLH GHL  +M+L WLQ
Sbjct: 6   KSDFLRVMQERGYLADCTDMQALDEALSKGVVPAYIGYDATAASLHVGHLLNIMMLRWLQ 65

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           KTGHKPI+LMGGGT+ +GDPSFR E R ++    I ENIE ++ +F+ ++ YG G TDAL
Sbjct: 66  KTGHKPITLMGGGTTKVGDPSFRSEERPLLTPDRIDENIEGMRKVFARYLSYGEGATDAL 125

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           MLNN  WL  + Y+D LR+IG  FSVNRMLSFESV+SRL REQSLSFLEFNYMILQAYDF
Sbjct: 126 MLNNAEWLDQLNYLDFLRDIGRHFSVNRMLSFESVKSRLDREQSLSFLEFNYMILQAYDF 185

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL +   CRLQMGGSDQWGNI+ GIDL  R+   ++F LTSPLLTT+ G KMGK+  GA
Sbjct: 186 LELFRRTGCRLQMGGSDQWGNIVNGIDLTRRVLEGEIFGLTSPLLTTSDGRKMGKSAGGA 245

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WLN EM +PY+FWQ+WRN  DADV  F K  T LP+ E DR+  LQG EIN AK ++A 
Sbjct: 246 VWLNGEMLAPYDFWQFWRNTTDADVGRFLKLYTELPVEECDRLGALQGSEINAAKILLAN 305

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E+TT++HGR+ AE A   A   F+       +  + +    +  G+ +   +V AG   S
Sbjct: 306 EVTTLLHGRDAAEAAEATARAVFEEGGVGGALEVVELPAATLGEGLSVAHFLVAAGLVAS 365

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             EA+R +  N ++ NN  + +    +          +K+S G+K H +  L
Sbjct: 366 GKEAKRLVAENGLRFNNEPVGDANTPVTAATVGE--ELKVSIGRKKHKLVRL 415


>gi|259418862|ref|ZP_05742779.1| tyrosyl-tRNA synthetase [Silicibacter sp. TrichCH4B]
 gi|259345084|gb|EEW56938.1| tyrosyl-tRNA synthetase [Silicibacter sp. TrichCH4B]
          Length = 415

 Score =  445 bits (1145), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 220/414 (53%), Positives = 288/414 (69%), Gaps = 4/414 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KSDF++I+ ERGF+   ++ + LD     G  TAYIGYD TA SLH GHL  +M+L WLQ
Sbjct: 6   KSDFIAIMMERGFLADCTDYQGLDEALVSGTQTAYIGYDATAQSLHVGHLLNIMMLRWLQ 65

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           KTGH+PI+LMGGGT+ +GDPSFR + R ++  ++I  NI  ++ +F+ ++ YG  +T A+
Sbjct: 66  KTGHRPITLMGGGTTKVGDPSFRSDERPLLGPEQIDANIAGMQKVFAKYLDYG--ETGAM 123

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           MLNN  WL  + Y++ LR+IG  FSVNRMLSFESV+SRL REQSLSFLEFNYMILQAYDF
Sbjct: 124 MLNNAEWLDGLNYLEFLRDIGRHFSVNRMLSFESVKSRLDREQSLSFLEFNYMILQAYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL + Y C LQMGGSDQWGNI+ GIDL  R+   ++F LTSPLLTT+ G KMGK+  GA
Sbjct: 184 LELNRRYGCVLQMGGSDQWGNIVNGIDLTRRVLDHEIFGLTSPLLTTSDGRKMGKSQGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           IWLN EM SPY FWQ+WRN  DADV  F K  T LP++E DR+  LQG EINE K I+A 
Sbjct: 244 IWLNDEMLSPYEFWQFWRNTTDADVGRFLKLYTELPVAECDRLGALQGSEINEGKIILAN 303

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E+T+++HG E A+ A   A E F+       +PT+S+S  E+  GM ++ +IVK+G A S
Sbjct: 304 EVTSLLHGAEAAKAAEATAREVFEKGGVGDDLPTLSLSAAELGEGMSIVQIIVKSGLAKS 363

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLCG 418
             EA+R +  N  ++N++ +++  L I      S   IKLS GKK H +  L G
Sbjct: 364 GKEAKRLISENGARLNDAPLTDAGLMIDAAALASP--IKLSAGKKRHALVQLDG 415


>gi|295689547|ref|YP_003593240.1| tyrosyl-tRNA synthetase [Caulobacter segnis ATCC 21756]
 gi|295431450|gb|ADG10622.1| tyrosyl-tRNA synthetase [Caulobacter segnis ATCC 21756]
          Length = 419

 Score =  445 bits (1144), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 206/412 (50%), Positives = 279/412 (67%), Gaps = 1/412 (0%)

Query: 3   AFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
           +FKS+FL  L  RG+IHQI++P ELD   S G+VTAYIG+D TA SLH G L Q+MLL  
Sbjct: 6   SFKSEFLRTLEARGYIHQITHPEELDAAASAGIVTAYIGFDATAPSLHVGSLIQIMLLRR 65

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD 122
           LQ+ GHKPI LMGGGT+ +GDP+ +DESR+++   +IQ NI  IK +F+ F+ +G G TD
Sbjct: 66  LQQAGHKPIVLMGGGTTKVGDPTGKDESRKLLSDADIQANIAGIKQVFAKFLTFGDGPTD 125

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
           A+M++N+ WL    Y+  LRE G  F+VNRML+F+SV+ RL+REQ ++FLEFNYM++QA 
Sbjct: 126 AIMVDNDVWLSKFGYVQFLREYGVHFTVNRMLAFDSVKLRLEREQPMTFLEFNYMLMQAV 185

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DF+EL + + C LQMGGSDQWGNI+ G++L  R+     F LT+PLL TASG KMGKT +
Sbjct: 186 DFLELNRAHGCVLQMGGSDQWGNILNGVELTRRVDQKSAFGLTTPLLATASGAKMGKTAA 245

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKII 302
           GA+WLN E  SPY++WQ+WRN +DADV  F K  T LP+ +I  +  L+G +INEAKK++
Sbjct: 246 GAVWLNAEQLSPYDYWQFWRNTEDADVGRFLKLFTDLPLEKIAELEALEGAQINEAKKVL 305

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFA 362
           A E T M HG EEA KA  AA + F+    S  +PT  +   ++  G+ L  L   AG A
Sbjct: 306 ADEATRMAHGEEEARKARDAAEKAFEQGALSADLPTFEVPAADLEAGIVLAALFTDAGLA 365

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            S  EARR  +   +K+N+   ++    I   D    G +KL+ GKK  ++ 
Sbjct: 366 GSRGEARRLAQGGGLKVNDKAEADANRTITSADL-VEGVVKLAAGKKKIVLV 416


>gi|126461923|ref|YP_001043037.1| tyrosyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17029]
 gi|189029760|sp|A3PIU9|SYY_RHOS1 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|126103587|gb|ABN76265.1| tyrosyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17029]
          Length = 416

 Score =  444 bits (1143), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 213/412 (51%), Positives = 277/412 (67%), Gaps = 2/412 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KSDFL ++ ERG++   ++ + LD   S GVV AYIGYD TA+SLH GHL  +M+L WLQ
Sbjct: 6   KSDFLRVMQERGYLADCTDMQALDEALSNGVVPAYIGYDATAASLHVGHLLNIMMLRWLQ 65

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           KTGHKPI+LMGGGT+ +GDPSFR E R ++    I ENIE ++ +F+ ++ YG G TDAL
Sbjct: 66  KTGHKPITLMGGGTTKVGDPSFRSEERPLLTPDRIDENIEGMRKVFARYLSYGEGATDAL 125

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           MLNN  WL  + Y+D LR+IG  FSVNRMLSFESV+SRL REQSLSFLEFNYMILQAYDF
Sbjct: 126 MLNNAEWLDQLNYLDFLRDIGRHFSVNRMLSFESVKSRLDREQSLSFLEFNYMILQAYDF 185

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL +   CRLQMGGSDQWGNI+ GIDL  R+   ++F LTSPLLTT+ G KMGK+  GA
Sbjct: 186 LELFRRTGCRLQMGGSDQWGNIVNGIDLTRRVLEGEIFGLTSPLLTTSDGRKMGKSAGGA 245

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WLN EM +PY+FWQ+WRN  DADV  F K  T LP+ E DR+  LQG EIN AK ++A 
Sbjct: 246 VWLNGEMLAPYDFWQFWRNTTDADVGRFLKLYTELPVEECDRLGALQGSEINAAKILLAN 305

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E+TT++HGR+ AE A   A   F+       +  + +    +  G+ +   +V AG   S
Sbjct: 306 EVTTLLHGRDAAEAAEATARAVFEEGGVGGALEVVELPAATLGDGLSVAHFLVAAGLVAS 365

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             EA+R +  N ++ NN  + +    +          +K+S G+K H +  L
Sbjct: 366 GKEAKRLVAENGLRFNNEPVGDANAPVTAATVGE--ELKVSIGRKKHKLVRL 415


>gi|163794305|ref|ZP_02188277.1| Tyrosyl-tRNA synthetase, class Ib [alpha proteobacterium BAL199]
 gi|159180473|gb|EDP64994.1| Tyrosyl-tRNA synthetase, class Ib [alpha proteobacterium BAL199]
          Length = 417

 Score =  444 bits (1143), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 205/417 (49%), Positives = 286/417 (68%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M   +SDFL  +++RGF HQ ++   LD   S  +VT YIG+D TA SLH G L Q+MLL
Sbjct: 1   MTTPRSDFLKAITDRGFFHQCTDLEALDAEFSSKMVTGYIGFDCTADSLHIGSLLQIMLL 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            W+QKTGHKPI LMGGGTS +GDPSF+DE+R+++  ++I  N   I  +F  ++ +G   
Sbjct: 61  RWMQKTGHKPIVLMGGGTSKVGDPSFKDEARKLLSEEDIARNKAGILQVFDKYLAFGDAA 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           TDA+M++N  WL  ++YI  LR+ G+ FSVNRMLSF+SV+ RL+REQSLSFLEFNYMILQ
Sbjct: 121 TDAVMVDNADWLDKLEYIPFLRDYGAHFSVNRMLSFDSVKLRLEREQSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDF+EL + Y C LQMGGSDQWGNI+ G++L  R+    +F LTSPL+TT+SG KMGKT
Sbjct: 181 AYDFLELRRRYGCVLQMGGSDQWGNIVNGVELTRRVDQQTIFGLTSPLITTSSGAKMGKT 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
             GA+WLN +  S Y+FWQ+WRN DDADV  F K  T +P+ E+ ++  L G EINEAKK
Sbjct: 241 AQGAVWLNADRLSVYDFWQFWRNTDDADVGRFLKLFTEMPLDEVAKLEALGGTEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+ATE+T + HGR  A+ AA  A + F+    ++ +P++ + + E++ G+ ++  + +AG
Sbjct: 301 ILATEVTALCHGRAAADDAAETARQTFEAGNSAEGLPSVDVPRSELASGLSVVEALRRAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            A S  EARR ++    ++N+  + +E   +     D  G IKLS G+K H +  + 
Sbjct: 361 LAASNGEARRLIRGGGARVNDQPVDDENATLGESSLDGDGVIKLSSGRKRHALLRVA 417


>gi|83942545|ref|ZP_00955006.1| tyrosyl-tRNA synthetase [Sulfitobacter sp. EE-36]
 gi|83846638|gb|EAP84514.1| tyrosyl-tRNA synthetase [Sulfitobacter sp. EE-36]
          Length = 416

 Score =  444 bits (1142), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 213/413 (51%), Positives = 282/413 (68%), Gaps = 4/413 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KSDF+ I+ ERGF+   ++ + LD     G V AYIGYD TA SLH GHL  +M+L WLQ
Sbjct: 6   KSDFIRIMMERGFLADCTDYQGLDDALMNGAVPAYIGYDATAKSLHVGHLMNIMVLRWLQ 65

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           K G KPI+LMGGGT+ +GDPSFR + R ++ +  I  NI  ++ +F  ++ YG G +DA+
Sbjct: 66  KCGGKPITLMGGGTTKVGDPSFRSDERPLLDNAAIDANIAGMQQVFEKYLSYGDGASDAI 125

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           MLNN  WL ++ Y+  LR+IG  FSVNRMLSFESV+SRL REQSLSFLEFNYMILQAYDF
Sbjct: 126 MLNNAEWLDNLNYLAFLRDIGRHFSVNRMLSFESVKSRLDREQSLSFLEFNYMILQAYDF 185

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL + Y C LQMGGSDQWGNI+ GIDL  R+   ++F LT+PLLTT+ G KMGK+  GA
Sbjct: 186 LELNRRYGCLLQMGGSDQWGNIVNGIDLTRRVLDQEIFGLTTPLLTTSDGRKMGKSQGGA 245

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           IWLN +M SPY FWQ+WRN  DAD   F K  T LP+ E DR+  L+G +IN AK I+A 
Sbjct: 246 IWLNGDMLSPYEFWQFWRNTTDADTGKFLKIFTELPVEECDRLGALKGSDINAAKIILAN 305

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E+TT++HG E A+ A   A E F+       +PT+++S +++  G+ ++ LIVK+G A S
Sbjct: 306 EVTTLLHGAEAAKNAEATAREVFEKGGVGDDLPTLTLSAEDIGDGISIVQLIVKSGLAGS 365

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN-IKLSFGKKNHIICHL 416
             EA+R +  N  + N+  +++  L +   D D+    IKLS GKK H +  L
Sbjct: 366 GKEAKRLITENGARYNDEPLTDAGLMV---DADTLATPIKLSAGKKRHALVQL 415


>gi|42520919|ref|NP_966834.1| tyrosyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           melanogaster]
 gi|58698303|ref|ZP_00373220.1| tyrosyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           ananassae]
 gi|225630967|ref|YP_002727758.1| Tyrosyl-tRNA synthetase [Wolbachia sp. wRi]
 gi|81652226|sp|Q73G50|SYY_WOLPM RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|254765189|sp|C0R4X5|SYY_WOLWR RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|42410660|gb|AAS14768.1| tyrosyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           melanogaster]
 gi|58535176|gb|EAL59258.1| tyrosyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           ananassae]
 gi|225592948|gb|ACN95967.1| Tyrosyl-tRNA synthetase [Wolbachia sp. wRi]
          Length = 416

 Score =  443 bits (1139), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 210/408 (51%), Positives = 290/408 (71%), Gaps = 2/408 (0%)

Query: 6   SDFLSILSERGFIHQISNPRELD-ILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           S+FL+ + ERG+++Q +N   LD +L     + AYIG+D TA SLHAGHL Q+M+L  LQ
Sbjct: 5   SEFLNFIQERGYLYQCTNIEGLDQLLLQSNYIVAYIGFDCTAPSLHAGHLIQIMMLCHLQ 64

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           K G+KPI L+GGGT+ IGDPSF+D++R ++  + I +N   I+ I    + +   KT A+
Sbjct: 65  KFGYKPIVLLGGGTTKIGDPSFKDKARSILPVENINQNTSSIRRILEKMVSFNDSKTGAM 124

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           ++NN  WL +IKYID LR+IG++FSVNRMLSF+SV++RL REQ+LSFLEFNYM+LQAYDF
Sbjct: 125 IVNNADWLDNIKYIDFLRDIGAYFSVNRMLSFDSVKTRLDREQTLSFLEFNYMLLQAYDF 184

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL K YDCRLQ+GGSDQWGNI+ GI+LG++L  P+LF LT PLL  A G KMGKT SGA
Sbjct: 185 IELNKKYDCRLQIGGSDQWGNIVNGIELGKKLNLPELFGLTMPLLLNAQGKKMGKTESGA 244

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WL+  M  PY++WQY+RN+DD DV  F + LT +P+ EI ++  L+ +EINEAKK++AT
Sbjct: 245 VWLDDNMLKPYDYWQYFRNVDDQDVGRFLRLLTDVPIDEIRKLESLKDQEINEAKKVLAT 304

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E+T + HG +EAE A  AA+  F+    S  +P   I K++V+ G+ L+ L+   GF  S
Sbjct: 305 EVTKICHGDKEAELAQFAAISAFENE-DSSLLPDYIIKKEQVASGISLVDLLHDTGFEPS 363

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
              A+R ++ N  KIN+++++N    I  + F     IKLS GKK HI
Sbjct: 364 KGAAKRLIQGNGCKINDNVVNNIDHVINFESFKDQPFIKLSAGKKRHI 411


>gi|304321919|ref|YP_003855562.1| tyrosyl-tRNA synthetase [Parvularcula bermudensis HTCC2503]
 gi|303300821|gb|ADM10420.1| tyrosyl-tRNA synthetase [Parvularcula bermudensis HTCC2503]
          Length = 423

 Score =  443 bits (1139), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 212/418 (50%), Positives = 291/418 (69%), Gaps = 9/418 (2%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  F+SD L +L ERGFIHQI++P  LD    QG VT YIG+D TA SLHAGHLTQ+M+L
Sbjct: 1   MTRFQSDLLRVLDERGFIHQITHPDALDQAAKQGTVTGYIGFDATADSLHAGHLTQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            WLQ+TGH+PI+LMGGGT+ IGDPS +D  R+++    I  NI  I+  F  F+++G   
Sbjct: 61  HWLQQTGHRPIALMGGGTTKIGDPSGKDTQRKLLDDATIAANIAGIRQSFDPFLQFGDSG 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
             ALM+NN+ WL S+ YI  LR+ G  F++NRML+F+SV+ RL REQ L+FLEFNYM++Q
Sbjct: 121 NQALMVNNDDWLSSLGYIRFLRDFGVHFTINRMLTFDSVKLRLDREQPLTFLEFNYMLMQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK-------LFALTSPLLTTAS 233
           AYDF EL + Y C LQMGGSDQWGNI+ G++L  R+   +       +  LT+PLLTTAS
Sbjct: 181 AYDFFELNERYGCTLQMGGSDQWGNIVNGVELCRRIAAAEGAEGSRDVCGLTTPLLTTAS 240

Query: 234 GTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK 293
           G KMGKT +GA+WLN +  SPY +WQYWRN++DADVV+   R TTLP+ +I R+  L G 
Sbjct: 241 GKKMGKTENGAVWLNADRLSPYEYWQYWRNVEDADVVTMLTRFTTLPLDDIQRLGALGGA 300

Query: 294 EINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLL 353
           EINEAKKI+ATE T ++HGRE AE AA  A + F+    +  +P++++++  ++ G+ L 
Sbjct: 301 EINEAKKILATETTALLHGREAAEAAAETARQTFEQGGAADDLPSVTVAEAALAAGLPLF 360

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
               + G  +S +E RRH+K+ A+K+N++  + E+  +   ++   G IKLS GKK H
Sbjct: 361 EPFTELGLISSKSEGRRHIKAGALKVNDA-PATEEFSLT-PEYLIDGRIKLSIGKKKH 416


>gi|296445288|ref|ZP_06887247.1| tyrosyl-tRNA synthetase [Methylosinus trichosporium OB3b]
 gi|296257243|gb|EFH04311.1| tyrosyl-tRNA synthetase [Methylosinus trichosporium OB3b]
          Length = 450

 Score =  443 bits (1139), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 212/408 (51%), Positives = 290/408 (71%), Gaps = 1/408 (0%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+FL+ L  RGF+HQ S+   LD     G + AY+G+D TA+SLH G+L  +M+L WLQK
Sbjct: 38  SEFLATLIARGFVHQCSDFSGLDEKACSGDLVAYVGFDCTAASLHVGNLLSIMMLAWLQK 97

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
           TG KP+ L+GGGT+ +GDPS +DESR+++  + I  N   I+  F  F+ +G  KTDA++
Sbjct: 98  TGGKPLPLVGGGTTRVGDPSGKDESRKLLTIETIDANKAAIQKTFEKFLAFGARKTDAVL 157

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           L+N  WL  + YID LR++G  FSVNRMLS +SV+ RL REQ LSF+EFNYM LQ+YDFV
Sbjct: 158 LDNAEWLTKLNYIDFLRDVGRHFSVNRMLSMDSVKLRLDREQELSFIEFNYMCLQSYDFV 217

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           E+AK Y   LQMGGSDQWGNI+ G+DLG RL T +L+ALT+PLLTT+SG KMGKT +GA+
Sbjct: 218 EIAKRYGASLQMGGSDQWGNIVMGVDLGRRLGTHQLYALTAPLLTTSSGAKMGKTAAGAV 277

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
           WL+  M SPY++WQ+WRN++DADV+ F K  T LP+ EI+++A L G EINEAKK +ATE
Sbjct: 278 WLDASMLSPYDYWQFWRNVEDADVLRFLKLFTFLPLDEIEKLAALGGAEINEAKKALATE 337

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
            T ++HGRE AE AA  A   F+    +  +P +++   E S G+G+L+  VKAG   ST
Sbjct: 338 ATALLHGREAAEAAAETARRTFEEGALALSLPRVAVPAAEWSAGLGVLSAFVKAGLVAST 397

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            EARR +KS  +++N+  +++EK  +   +    G +KLS GKK H++
Sbjct: 398 GEARRQIKSGGLRLNDEPVTDEKATLGDANL-VDGVVKLSLGKKRHVL 444


>gi|163735823|ref|ZP_02143252.1| tyrosyl-tRNA synthetase, putative [Roseobacter litoralis Och 149]
 gi|161390909|gb|EDQ15249.1| tyrosyl-tRNA synthetase, putative [Roseobacter litoralis Och 149]
          Length = 416

 Score =  443 bits (1139), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 216/412 (52%), Positives = 289/412 (70%), Gaps = 2/412 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KSDF++++ ERGF+   ++ + LD    +GV +AYIG+D TA SLH G L Q+M+L W Q
Sbjct: 6   KSDFMAVMMERGFMADCTDYQGLDEALLKGVQSAYIGFDATAKSLHVGSLIQIMMLRWFQ 65

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           KTGHKP++LMGGGT+ +GDPSFR + R ++  + I +NI  IK +FS++I Y    T AL
Sbjct: 66  KTGHKPLTLMGGGTTKVGDPSFRADERPLLGPEAIDDNIAGIKQVFSAYIDYSDAPTGAL 125

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           MLNN  WL ++ Y+D LR+IG  FS+NRMLSFESV+SRL REQSLSFLEFNYMILQAYDF
Sbjct: 126 MLNNAEWLDNLNYLDFLRDIGRHFSINRMLSFESVKSRLDREQSLSFLEFNYMILQAYDF 185

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL + Y C LQ+GGSDQWGNI+ GIDL  R+   +++ LTSPLLTT+ G KMGK+ SGA
Sbjct: 186 MELHRRYGCILQLGGSDQWGNIVNGIDLTRRVIDGEVYGLTSPLLTTSDGKKMGKSQSGA 245

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WLN +M SPY FWQ+WRN  DADV  F K  T LP+ E +R+  L G EIN AK  +A 
Sbjct: 246 VWLNADMFSPYEFWQFWRNTTDADVGRFLKLYTELPLDECERLGALAGSEINAAKITLAN 305

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           EITT++HG E A  AA  A + F+       +PT+++S ++V++G+ ++ LIVK+G A S
Sbjct: 306 EITTLLHGAEAAATAAQTAHDVFEKGGVGDDLPTLTLSAEDVAQGISIVQLIVKSGLANS 365

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             EA+R +  N  K++++ ++N  L I      S   IKLS GKK H +  L
Sbjct: 366 GKEAKRLIAENGAKLDDAPLTNAGLMIDAAALQSP--IKLSAGKKRHAMVQL 415


>gi|254487653|ref|ZP_05100858.1| tyrosyl-tRNA synthetase [Roseobacter sp. GAI101]
 gi|214044522|gb|EEB85160.1| tyrosyl-tRNA synthetase [Roseobacter sp. GAI101]
          Length = 416

 Score =  443 bits (1139), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 214/412 (51%), Positives = 286/412 (69%), Gaps = 2/412 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KS+F+ I+ ERGF+   ++ + LD    +G   AYIG+D TA SLH G L Q+M+L WLQ
Sbjct: 6   KSEFIRIMMERGFVADCTDYQGLDEALLKGAQPAYIGFDATAKSLHVGSLIQIMMLRWLQ 65

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           KTG KPI+LMGGGT+ +GDPSFR + R ++ S++I +NI  IK +FS+++ YG G +DA 
Sbjct: 66  KTGGKPITLMGGGTTKVGDPSFRADERPLLTSEQIDDNISGIKKVFSAYLTYGDGPSDAQ 125

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M+NN  WL  + Y+D LR+IG  FS+NRMLSFESV+SRL REQSLSFLEFNYMILQAYDF
Sbjct: 126 MINNAEWLDGLNYLDFLRDIGRHFSINRMLSFESVKSRLDREQSLSFLEFNYMILQAYDF 185

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL + Y C LQMGGSDQWGNI+ GIDL  R+   +++ LT+PLLTT+ G KMGK+ SGA
Sbjct: 186 MELHRRYGCILQMGGSDQWGNIVNGIDLTRRVIDGEVYGLTTPLLTTSDGKKMGKSQSGA 245

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           IWLN +M SPY FWQ+WRN  DADV  F K  T LP+ E DR+  L+G EINEAK  +A 
Sbjct: 246 IWLNPDMLSPYEFWQFWRNTTDADVGRFLKLYTELPIDECDRLGALEGSEINEAKIRLAN 305

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E+T ++HG + A  A   A E F+       +PT+++S  ++  GM ++ LIVK+G A S
Sbjct: 306 EVTALLHGADAAAAAEATAREVFEKGGVGDDLPTLTLSPSDIGDGMSIVQLIVKSGLAGS 365

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             EA+R +  N  +IN+  +++  + I     ++   IKLS GKK H +  L
Sbjct: 366 GKEAKRLISENGARINDEPLTDAGMMIDAAALETP--IKLSAGKKRHALVQL 415


>gi|255264506|ref|ZP_05343848.1| tyrosyl-tRNA synthetase [Thalassiobium sp. R2A62]
 gi|255106841|gb|EET49515.1| tyrosyl-tRNA synthetase [Thalassiobium sp. R2A62]
          Length = 417

 Score =  442 bits (1138), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 214/413 (51%), Positives = 291/413 (70%), Gaps = 3/413 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KSDF++++ ERGF+   ++ + LD   + GVV AYIG+D TA SLH G L Q+M+L WLQ
Sbjct: 6   KSDFITVMIERGFLADCTDYQGLDDAFAAGVVPAYIGFDATAQSLHVGSLIQIMMLRWLQ 65

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK-TDA 123
           K G KPI+LMGGGT+ +GDPSFR + R ++ +++I  NI  IK +F+++I Y +G  T A
Sbjct: 66  KCGGKPITLMGGGTTKVGDPSFRADERPLLTTKQINANIAGIKQVFAAYIDYESGDDTQA 125

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           LMLNN  WL  + Y+D LR+IG  FSVNRML+FESV+SRL REQSLSFLEFNYMILQAYD
Sbjct: 126 LMLNNAEWLEDLNYLDFLRDIGRHFSVNRMLAFESVKSRLDREQSLSFLEFNYMILQAYD 185

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+EL + Y C LQ+GGSDQWGNI+ GIDL  R+   +++ LTSPLLTT+ G KMGK+  G
Sbjct: 186 FLELNRRYGCLLQLGGSDQWGNIVNGIDLTRRVLDHEIYGLTSPLLTTSDGKKMGKSQDG 245

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIA 303
           AIWLN EM +PY FWQ+WRN +D DV  F K  T LP++E DR+  L+G +INEAK ++A
Sbjct: 246 AIWLNAEMCAPYEFWQFWRNTNDDDVGRFLKLYTDLPIAECDRLGALEGSDINEAKIVLA 305

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
            E+T ++HG++ A  A   A E F+       +PT++++ D+VS G+ ++ LIV++G A 
Sbjct: 306 NEVTKLLHGKDAAAAAEATAREVFEKGGVGDDLPTLTLTADDVSDGISVVQLIVRSGLAG 365

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           S  EA+R +  N  K+N+  +++  +   LQ  D    IKLS GKK H +  L
Sbjct: 366 SGKEAKRLIADNGAKMNDEALTDAGM--VLQAADLVTPIKLSAGKKRHALVQL 416


>gi|83953766|ref|ZP_00962487.1| tyrosyl-tRNA synthetase [Sulfitobacter sp. NAS-14.1]
 gi|83841711|gb|EAP80880.1| tyrosyl-tRNA synthetase [Sulfitobacter sp. NAS-14.1]
          Length = 416

 Score =  442 bits (1137), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 211/412 (51%), Positives = 279/412 (67%), Gaps = 2/412 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KSDF+ I+ ERGF+   ++ + LD     G V AYIGYD TA SLH GHL  +M+L WLQ
Sbjct: 6   KSDFIRIMMERGFLADCTDYQGLDDALINGAVPAYIGYDATAKSLHVGHLMNIMVLRWLQ 65

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           K G KPI+LMGGGT+ +GDPSFR + R ++ +  I  NI  ++ +F  ++ YG G +DA+
Sbjct: 66  KCGGKPITLMGGGTTKVGDPSFRSDERPLLDNAAIDANIAGMQQVFEKYLSYGDGDSDAI 125

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           MLNN  WL ++ Y+  LR+IG  FSVNRMLSFESV+SRL REQSLSFLEFNYMILQAYDF
Sbjct: 126 MLNNAEWLDNLNYLAFLRDIGRHFSVNRMLSFESVKSRLDREQSLSFLEFNYMILQAYDF 185

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL + Y C LQMGGSDQWGNI+ GIDL  R+   ++F LT+PLLTT+ G KMGK+  GA
Sbjct: 186 LELNRRYGCLLQMGGSDQWGNIVNGIDLTRRVLDQEIFGLTTPLLTTSDGRKMGKSQGGA 245

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           IWLN +M SPY FWQ+WRN  DAD   F K  T LP+ E DR+  L+G +IN AK I+A 
Sbjct: 246 IWLNGDMLSPYEFWQFWRNTTDADTGKFLKIFTELPVEECDRLGALEGSDINAAKIILAN 305

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E+TT++HG E A+ A   A E F+       +PT+++S  ++  G+ ++ LIVK+G A S
Sbjct: 306 EVTTLLHGAEAAKNAEATAREVFEKGGVGDDLPTLTLSAADIGDGISIVQLIVKSGLAGS 365

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             EA+R +  N  + N+  +++  L +      +   IKLS GKK H +  L
Sbjct: 366 GKEAKRLITENGARYNDEPLTDAGLMVDAATLATP--IKLSAGKKRHALVQL 415


>gi|167646543|ref|YP_001684206.1| tyrosyl-tRNA synthetase [Caulobacter sp. K31]
 gi|189083645|sp|B0SXC3|SYY_CAUSK RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|167348973|gb|ABZ71708.1| tyrosyl-tRNA synthetase [Caulobacter sp. K31]
          Length = 419

 Score =  442 bits (1136), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 204/412 (49%), Positives = 279/412 (67%), Gaps = 1/412 (0%)

Query: 3   AFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
           +FKS+FL  L  RG+IHQI++P ELD   + G+VTAYIG+D TA SLH G L Q+M+L  
Sbjct: 6   SFKSEFLQTLQARGYIHQITHPDELDAAAAGGIVTAYIGFDATAPSLHVGSLIQIMMLRR 65

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD 122
           LQ+ GHKPI LMGGGT+ +GDP+ +DESR+++   +I  NI  IK +F+ F+ +G G TD
Sbjct: 66  LQQAGHKPIVLMGGGTTKVGDPTGKDESRKLLSDADIAANIAGIKQVFAKFLTFGDGPTD 125

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
           A+M++N+ WL    Y+  LR+ G  F+VNRML+F+SV+ RL+REQ ++FLEFNYM++QA 
Sbjct: 126 AIMVDNDVWLSKFGYVQFLRDYGVHFTVNRMLAFDSVKLRLEREQPMTFLEFNYMLMQAV 185

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DF+EL + + C LQMGGSDQWGNI+ G++L  R+     F LT+PLL TASG KMGKT+S
Sbjct: 186 DFLELNRAHGCVLQMGGSDQWGNILNGVELTRRVDHKAAFGLTTPLLATASGAKMGKTMS 245

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKII 302
           GA+WLN E  SPY++WQ+WRN +DADV  F K  T LP+ EI R+  L G +IN+AKK++
Sbjct: 246 GAVWLNAEQLSPYDYWQFWRNTEDADVGRFLKLFTDLPLDEIARLEALPGAQINDAKKVL 305

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFA 362
           A E T M HG +EA KA  AA + F+    S  +PT  I+  E+  G+ L  L   AG A
Sbjct: 306 ADEATRMAHGEDEARKARDAAEKAFEQGALSADLPTFEIAAAELKAGIVLANLFADAGLA 365

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            S  EARR  +   +K+N+    +    +   D    G +KL+ GKK  ++ 
Sbjct: 366 ASRGEARRLAQGGGVKVNDKAEPDANRVVTEADL-VEGVVKLAAGKKKIVLV 416


>gi|332557924|ref|ZP_08412246.1| tyrosyl-tRNA synthetase [Rhodobacter sphaeroides WS8N]
 gi|332275636|gb|EGJ20951.1| tyrosyl-tRNA synthetase [Rhodobacter sphaeroides WS8N]
          Length = 416

 Score =  441 bits (1135), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 214/412 (51%), Positives = 278/412 (67%), Gaps = 2/412 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KSDFL ++ ERG++   ++ + LD   S+GVV AYIGYD TA+SLH GHL  +M+L WLQ
Sbjct: 6   KSDFLRVMQERGYLADCTDMQALDEALSKGVVPAYIGYDATAASLHVGHLLNIMMLRWLQ 65

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           KTGHKPI+LMGGGT+ +GDPSFR E R ++    I ENIE ++ +F+ ++ YG G TDAL
Sbjct: 66  KTGHKPITLMGGGTTKVGDPSFRSEERPLLTPDRIDENIEGMRKVFARYLSYGEGATDAL 125

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           MLNN  WL  + Y+D LR+IG  FSVNRMLSFESV+SRL REQSLSFLEFNYMILQAYDF
Sbjct: 126 MLNNAEWLDQLNYLDFLRDIGRHFSVNRMLSFESVKSRLDREQSLSFLEFNYMILQAYDF 185

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL +   CRLQMGGSDQWGNI+ GIDL  R+   ++F LTSPLLTT+ G KMGK+  GA
Sbjct: 186 LELFRRTGCRLQMGGSDQWGNIVNGIDLTRRVLEGEIFGLTSPLLTTSDGRKMGKSAGGA 245

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WLN EM +PY+FWQ+WRN  DADV  F K  T LP+ E DR+  LQG EIN AK ++A 
Sbjct: 246 VWLNGEMLAPYDFWQFWRNTTDADVGRFLKLYTELPVEECDRLGALQGSEINAAKILLAN 305

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E+TT++HGRE AE A   A   F+       +  + +    +  G+ +   +V AG   S
Sbjct: 306 EVTTLLHGREAAEAAEATARAVFEEGGVGGALEVVELPAATLGDGLSVAHFLVAAGLVAS 365

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             EA+R +  N ++ NN  + +    +          +K+S G+K H +  L
Sbjct: 366 GKEAKRLVAENGLRFNNEPVGDANAPVTAATVGE--ELKVSIGRKKHKLVRL 415


>gi|114765966|ref|ZP_01444980.1| tyrosyl-tRNA synthetase [Pelagibaca bermudensis HTCC2601]
 gi|114541780|gb|EAU44818.1| tyrosyl-tRNA synthetase [Roseovarius sp. HTCC2601]
          Length = 417

 Score =  440 bits (1132), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 216/413 (52%), Positives = 286/413 (69%), Gaps = 3/413 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KSDF+ ++ ERG++   ++ + LD   S+GVVTAYIGYD TA SLH GHL  +M+L WLQ
Sbjct: 6   KSDFMRVMIERGYLADCTDYQGLDEALSKGVVTAYIGYDATAKSLHVGHLLNIMMLRWLQ 65

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           KTGH+PI+LMGGGT+ +GDPSFR + R ++   +I +NIE +K +F+ ++ Y   +T AL
Sbjct: 66  KTGHQPITLMGGGTTKVGDPSFRADERPLLTPGQIDDNIEGMKQVFAKYLDYDRAETPAL 125

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           MLNN  WL  + Y++ LR+IG  FSVNRMLSFESV+SRL REQSLSFLEFNYMILQAYDF
Sbjct: 126 MLNNAEWLDGLNYLEFLRDIGRHFSVNRMLSFESVKSRLDREQSLSFLEFNYMILQAYDF 185

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL + Y C LQMGGSDQWGNI+ GIDL  R+   +++ LTSPLLTT+ G KMGK+  GA
Sbjct: 186 LELNRRYGCLLQMGGSDQWGNIVNGIDLTRRVLDNEIYGLTSPLLTTSDGRKMGKSQGGA 245

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WLN +M SPY FWQ+WRN  DADV  F K  T LP+ E DR+  L G EIN AK I+A 
Sbjct: 246 MWLNADMLSPYEFWQFWRNSTDADVGRFLKLYTELPVEECDRLGALSGSEINAAKIILAN 305

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV-SRGMGLLTLIVKAGFAT 363
           E+TT+ HG E A  A   A E F+       +PT+ +S +E+   G+ ++ LIV+AG A 
Sbjct: 306 EVTTLCHGAEAATAAEATAREVFEKGGVGDDLPTLELSAEELGGEGISIVQLIVRAGLAK 365

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           S  EA+R +  N  +I+++ +++  L +      S   +KLS GKK H +  L
Sbjct: 366 SGKEAKRLIAENGARIDDAPLTDAGLMLDAAALASP--VKLSAGKKRHALVKL 416


>gi|85702960|ref|ZP_01034064.1| tyrosyl-tRNA synthetase [Roseovarius sp. 217]
 gi|85671888|gb|EAQ26745.1| tyrosyl-tRNA synthetase [Roseovarius sp. 217]
          Length = 417

 Score =  440 bits (1131), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 215/414 (51%), Positives = 285/414 (68%), Gaps = 2/414 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KSDFLS++  RG++   ++ + LD   S G VTAYIGYD TA SLH GHL  +M+L WLQ
Sbjct: 6   KSDFLSVMMSRGYLADCTDYQGLDEALSAGTVTAYIGYDATAKSLHVGHLLNIMMLRWLQ 65

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           KTGH+PI+LMGGGT+ +GDPSFR + R ++   +I ENI  +  +F+ ++ YG G  DAL
Sbjct: 66  KTGHRPITLMGGGTTKVGDPSFRSDERPLLSPAQIDENIAGMNRVFARYLDYGEGPQDAL 125

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           MLNN  WL  + Y++ LR+IG  FSVNRML+FESV+SRL REQSLSFLEFNYMILQAYDF
Sbjct: 126 MLNNADWLDGLNYLEFLRDIGRHFSVNRMLAFESVKSRLDREQSLSFLEFNYMILQAYDF 185

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +E+ + + C LQMGGSDQWGNII GIDL  R+   ++F LTSPLLTT+ G KMGK+  GA
Sbjct: 186 LEINRRHGCLLQMGGSDQWGNIINGIDLTRRVIDHEVFGLTSPLLTTSDGRKMGKSAGGA 245

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WL+ +M SPY FWQ+WRN  DAD   F K  T LP+ + DR+  L+G +IN AK I+A 
Sbjct: 246 VWLSADMLSPYEFWQFWRNTTDADTGRFLKLYTELPIEDCDRLGALEGSDINAAKIILAN 305

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           EITT++HG E A+ A   A E F+       +PTI ++  E++ G+ ++ LIV+AG A S
Sbjct: 306 EITTLLHGAEAAQAAEATAREVFEHGGVGDDLPTIEVTAQELAEGISIVQLIVRAGLAKS 365

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLCG 418
             EA+R +  N  ++++  +++  L I      S   IKLS GKK H +  L G
Sbjct: 366 GKEAKRLITENGARLDDEPLTDAGLMIDAGALKSP--IKLSAGKKRHALVKLEG 417


>gi|89070003|ref|ZP_01157335.1| tyrosyl-tRNA synthetase [Oceanicola granulosus HTCC2516]
 gi|89044451|gb|EAR50582.1| tyrosyl-tRNA synthetase [Oceanicola granulosus HTCC2516]
          Length = 416

 Score =  440 bits (1131), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 214/412 (51%), Positives = 286/412 (69%), Gaps = 2/412 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KS+F++ + ERGF+   ++ + LD   S+GVVTAYIGYD TA SLH GHL  +MLL WLQ
Sbjct: 6   KSEFMARIMERGFLADCTDYQSLDEELSKGVVTAYIGYDATARSLHVGHLLNIMLLRWLQ 65

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           KTGH+PI+LMGGGT+ +GDPSFR + R ++  ++I  NI  ++ +F  ++ YG G T A 
Sbjct: 66  KTGHQPITLMGGGTTKVGDPSFRADERPLLGPEQIDANIAGMQAVFERYLDYGEGATGAK 125

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           MLNN  WL  + Y+D LR+IG  FSVNRMLSFESV+SRL REQSLSFLEFNYMILQAYDF
Sbjct: 126 MLNNAEWLDGLNYLDFLRDIGRHFSVNRMLSFESVKSRLDREQSLSFLEFNYMILQAYDF 185

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL + + C LQMGGSDQWGNI+ G+DL  R+   +++ LT+PLLTT+ G KMGK+  GA
Sbjct: 186 LELNRRHGCLLQMGGSDQWGNIVNGVDLTRRVLDREIYGLTTPLLTTSDGRKMGKSQGGA 245

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WLN +M SPY FWQ+WRN  DAD   F K  T LP+ E +R+  L G EINEAK ++A 
Sbjct: 246 VWLNADMLSPYEFWQFWRNTTDADTGRFLKLYTELPLEECERLGALGGAEINEAKIVLAN 305

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E+T ++HGRE A  A   A E F+       +PT+++S DE + G+ ++ LIV+AG A S
Sbjct: 306 EVTALLHGREAAATAEATAREVFEKGGVGGDLPTLTLSADEAAGGVSVVQLIVRAGLAGS 365

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             EA+R +  N  ++++  +++  L I  +   S   IKLS GKK H +  L
Sbjct: 366 GKEAKRLIADNGARLDDRPLTDAGLVIGTEQLASP--IKLSAGKKRHALVQL 415


>gi|146276975|ref|YP_001167134.1| tyrosyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17025]
 gi|189029761|sp|A4WR15|SYY_RHOS5 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|145555216|gb|ABP69829.1| tyrosyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17025]
          Length = 416

 Score =  440 bits (1131), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 215/413 (52%), Positives = 280/413 (67%), Gaps = 2/413 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KSDFL ++ ERG++   ++ + LD   S+GVV AYIGYD TA+SLH GHL  +M+L WLQ
Sbjct: 6   KSDFLRVMQERGYLADCTDMQALDEAMSKGVVPAYIGYDATAASLHVGHLLNIMMLRWLQ 65

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           KTGHKPI+LMGGGT+ +GDPSFR E R ++  ++I  NI  +K +F+ ++ Y  G T AL
Sbjct: 66  KTGHKPITLMGGGTTKVGDPSFRSEERPLLTPEKIDANIAGMKQVFARYLDYSDGATGAL 125

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           MLNN  WL S+ Y+D LR+IG  FSVNRMLSFESV+SRL REQSLSFLEFNYMILQAYDF
Sbjct: 126 MLNNAEWLDSLNYLDFLRDIGRHFSVNRMLSFESVKSRLDREQSLSFLEFNYMILQAYDF 185

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL + Y CRLQMGGSDQWGNI+ GIDL  R+   ++F LTSPLLTT+ G KMGK+  GA
Sbjct: 186 LELFRRYGCRLQMGGSDQWGNIVNGIDLTRRVLEGEIFGLTSPLLTTSDGRKMGKSAGGA 245

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WL+ EM +PY+FWQ+WRN  DADV  F K  T LP+ E DR+  LQG EIN AK  +A 
Sbjct: 246 VWLSGEMLAPYDFWQFWRNTTDADVGRFLKLYTELPVEECDRLGALQGAEINGAKIRLAN 305

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E+TT++HGRE AE A   A   F+       +  + I+   +  G+ +   +V AG  TS
Sbjct: 306 EVTTLLHGREAAEAAEATARAVFEQGGVGGALEVVEIAPATLGEGLSVTHFLVAAGLVTS 365

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
             EA+R +  N ++ NN  +S+    +          +K+S G+K H +  L 
Sbjct: 366 GKEAKRLVAENGLRFNNEPVSDANAPVTAAMIGD--ELKVSIGRKKHKLVRLA 416


>gi|110680333|ref|YP_683340.1| tyrosyl-tRNA synthetase, putative [Roseobacter denitrificans OCh
           114]
 gi|122972642|sp|Q164D9|SYY_ROSDO RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|109456449|gb|ABG32654.1| tyrosyl-tRNA synthetase, putative [Roseobacter denitrificans OCh
           114]
          Length = 416

 Score =  439 bits (1130), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 214/412 (51%), Positives = 287/412 (69%), Gaps = 2/412 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KSDF++++  RGF+   ++ + LD    +GV  AYIG+D TA SLH G L Q+M+L W Q
Sbjct: 6   KSDFMAVMMARGFMADCTDYQGLDEALLKGVQPAYIGFDATAKSLHVGSLIQIMMLRWFQ 65

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           KTGHKP++LMGGGT+ +GDPSFR + R ++  + I +NI  IK +FS++I Y    T AL
Sbjct: 66  KTGHKPLTLMGGGTTKVGDPSFRADERPLLGPEAIDDNIAGIKQVFSAYIDYSDAPTGAL 125

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           MLNN  WL ++ Y+D LR+IG  FS+NRMLSFESV+SRL REQSLSFLEFNYMILQAYDF
Sbjct: 126 MLNNAEWLDNLNYLDFLRDIGRHFSINRMLSFESVKSRLDREQSLSFLEFNYMILQAYDF 185

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL + Y C LQ+GGSDQWGNI+ GIDL  R+   +++ LTSPLLTT+ G KMGK+ SGA
Sbjct: 186 MELYRRYGCILQLGGSDQWGNIVNGIDLTRRVIDGEVYGLTSPLLTTSDGKKMGKSQSGA 245

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WLN +M SPY FWQ+WRN  DADV  F K  T LP+ E +R+  L G EIN AK  +A 
Sbjct: 246 VWLNADMFSPYEFWQFWRNTTDADVGRFLKLYTELPLDECERLGALAGSEINAAKITLAN 305

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E+TT++HG E A  AA  A + F+       +PT+++S ++V++G+ ++ LIVK+G A S
Sbjct: 306 EVTTLLHGAEAAATAAQTARDVFEKGGVGDDLPTLTLSAEDVAQGISIVQLIVKSGLANS 365

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             EA+R +  N  K++++ ++N  L I      S   IKLS GKK H +  L
Sbjct: 366 GKEAKRLIAENGAKMDDAPLTNAGLMIDAAALQSP--IKLSAGKKRHAMVQL 415


>gi|149184500|ref|ZP_01862818.1| tyrosyl-tRNA synthetase [Erythrobacter sp. SD-21]
 gi|148831820|gb|EDL50253.1| tyrosyl-tRNA synthetase [Erythrobacter sp. SD-21]
          Length = 409

 Score =  439 bits (1130), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 208/416 (50%), Positives = 284/416 (68%), Gaps = 8/416 (1%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  ++S+ L +L ERG+IHQI++P  LD L ++ VV  YIG+D TA SLH G L Q+M+L
Sbjct: 1   MSTYQSELLRLLEERGYIHQITDPEGLDGLAARQVVPGYIGFDATAQSLHIGSLVQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             LQ+ GHKPI +MGGGT+ +GDPS +DESR+M+    I+ NI  I+ +F   + +G G 
Sbjct: 61  RRLQQAGHKPIVVMGGGTTKVGDPSGKDESRKMLNDAGIEANIAGIRTVFERLLTFGEGP 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           TDA+M+NN+ WL  + YI+LLR++G  F+VNRML+F+SV+ RL REQ L+FLEFNYMILQ
Sbjct: 121 TDAVMVNNDEWLSQLGYIELLRDVGPHFTVNRMLTFDSVKLRLDREQPLTFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDF ELA+ YDCRLQMGGSDQWGNI+ G++L  R+   +LF LT+PLLTTA G KMGKT
Sbjct: 181 AYDFRELAQRYDCRLQMGGSDQWGNIVNGMELARRMDGRELFGLTTPLLTTADGAKMGKT 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
            +GA+WLN+E    Y+FWQYWRN+DD DV  F +  T LP+ EI R+  L+G E+N+AK 
Sbjct: 241 AAGAVWLNEEQLPAYDFWQYWRNVDDRDVGRFLRLFTDLPLDEIARLESLEGAEVNQAKT 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+A E+T +V G E A+ AA  A E F      + +PT+++     + GM +  ++   G
Sbjct: 301 ILANEVTALVRGSEAADLAARTAAETFAGGGAGEDLPTLAVG----AEGMRIGAVLTGLG 356

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH-IICH 415
           F  S  EA+R L   A+K+    +++    +++ D       KLS GKK H IIC 
Sbjct: 357 FCASGKEAKRKLSEGAVKLGGEAVTDPGYLVEVAD---GAQAKLSLGKKKHAIICR 409


>gi|163746477|ref|ZP_02153835.1| tyrosyl-tRNA synthetase, putative [Oceanibulbus indolifex HEL-45]
 gi|161380362|gb|EDQ04773.1| tyrosyl-tRNA synthetase, putative [Oceanibulbus indolifex HEL-45]
          Length = 416

 Score =  439 bits (1129), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 207/412 (50%), Positives = 280/412 (67%), Gaps = 2/412 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KS+F+  + +RGF+   ++ + LD    +G   AY+GYD TA SLH GHL  +M+L WLQ
Sbjct: 6   KSEFIHTMMQRGFLADCTDYQGLDEALMKGAAPAYVGYDATAKSLHVGHLVNIMMLRWLQ 65

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           K G KPI+LMGGGT+ +GDPSFR + R ++  + I +NIE I+ +F+ ++ YG   +DAL
Sbjct: 66  KFGGKPITLMGGGTTKVGDPSFRSDERPLLTPEAIDDNIEGIRQVFARYLDYGDRPSDAL 125

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           MLNN  WL ++ Y+D LR+IG  FS+NRMLSFESV+SRL REQSLSFLEFNYMILQAYDF
Sbjct: 126 MLNNAEWLDNLNYLDFLRDIGRHFSINRMLSFESVKSRLDREQSLSFLEFNYMILQAYDF 185

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL + Y C LQMGGSDQWGNI+ GIDL  R+   +++ LTSPLLTT+ G KMGK+  GA
Sbjct: 186 MELHRRYGCVLQMGGSDQWGNIVNGIDLTRRVIDGEVYGLTSPLLTTSDGKKMGKSAGGA 245

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WLN +M SPY FWQ+WRN  DADV  F K  T LP+ E DR+  L G EINEAK  +A 
Sbjct: 246 VWLNGDMLSPYEFWQFWRNCTDADVGRFLKLYTELPVDECDRLGALAGSEINEAKVRLAN 305

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E+T ++HG E A  A   A E F+       +PT+++S  +V  G+ ++ L+VK+G A S
Sbjct: 306 EVTGLLHGEEAARNAEATAREVFEKGGVGDDLPTLTLSAADVGDGVSIVQLLVKSGLAGS 365

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             EA+R +  N  +I++  +++  + +      S   IKLS GKK H +  +
Sbjct: 366 GKEAKRLIAENGARIDDQPLTDAGMMLDAGALSSP--IKLSAGKKRHALVQI 415


>gi|254461107|ref|ZP_05074523.1| tyrosyl-tRNA synthetase [Rhodobacterales bacterium HTCC2083]
 gi|206677696|gb|EDZ42183.1| tyrosyl-tRNA synthetase [Rhodobacteraceae bacterium HTCC2083]
          Length = 429

 Score =  438 bits (1127), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 214/414 (51%), Positives = 288/414 (69%), Gaps = 2/414 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KSDF++++ ERGF+   ++ + LD +  +G + AYIG+D TA SLH G L Q+M+L WLQ
Sbjct: 18  KSDFIAVMMERGFLADCTDYQGLDEVALKGGMPAYIGFDATAESLHVGSLIQIMMLRWLQ 77

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           KTG KPI+LMGGGT+ +GDPSFR + R ++  ++I +NI  IK +FS+++ YG G +DAL
Sbjct: 78  KTGGKPITLMGGGTTKVGDPSFRADERPLLTPEKIDDNIAGIKKVFSAYLTYGDGPSDAL 137

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M+NN  WL  + Y+D LR+IG  FSVNRML+FESV+SRL REQSLSFLEFNYMILQAYDF
Sbjct: 138 MINNAEWLDGLNYLDFLRDIGKHFSVNRMLAFESVKSRLDREQSLSFLEFNYMILQAYDF 197

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL + Y C LQMGGSDQWGNI+ GIDL  R+   ++F LTSPLLTT+ G KMGK+  GA
Sbjct: 198 LELNRRYGCVLQMGGSDQWGNIVNGIDLTRRVLDNQIFGLTSPLLTTSDGKKMGKSADGA 257

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WLN +M SPY FWQ+WRN  DADV  F K  T +P+ E +R+  L G EINEAK I+A 
Sbjct: 258 VWLNPDMRSPYEFWQFWRNTTDADVGRFLKLYTEMPVEECERLGALAGSEINEAKVILAN 317

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           EIT + HG E A  A   A E F+       +PT+ ++++E+  G+ ++  IV+AG A S
Sbjct: 318 EITKLCHGAEAAGTAEATAREVFEKGGVGDDLPTLELTREELGDGLSIVQAIVRAGLAKS 377

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLCG 418
             +A+R +  N  KI+++ +++  L +      S   IKLS GKK H +  L G
Sbjct: 378 GKDAKRLISENGAKIDDAPLNDAGLMLDAAALASP--IKLSAGKKRHALIVLKG 429


>gi|260433460|ref|ZP_05787431.1| tyrosyl-tRNA synthetase [Silicibacter lacuscaerulensis ITI-1157]
 gi|260417288|gb|EEX10547.1| tyrosyl-tRNA synthetase [Silicibacter lacuscaerulensis ITI-1157]
          Length = 416

 Score =  437 bits (1125), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 216/412 (52%), Positives = 283/412 (68%), Gaps = 2/412 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KSDF++ + ERGF+   ++ + LD   + GV TAYIGYD TA SLH GHL  +M+L W Q
Sbjct: 6   KSDFIATMIERGFLADCTDYQGLDDALTSGVQTAYIGYDATAQSLHVGHLMNIMVLRWFQ 65

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           K GHKPI+LMGGGT+ +GDPSFR + R ++  ++I  NI  ++ +F  ++ Y    T AL
Sbjct: 66  KLGHKPITLMGGGTTKVGDPSFRSDERPLLGPEQIDANIAGMQKVFDKYLSYDDSDTGAL 125

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           MLNN  WL  + Y+D LR+IG  FSVNRMLSFESV+SRL REQSLSFLEFNYMILQAYDF
Sbjct: 126 MLNNAEWLDDLNYLDFLRDIGRHFSVNRMLSFESVKSRLDREQSLSFLEFNYMILQAYDF 185

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL + Y C LQMGGSDQWGNI+ GIDL  R+   +++ LT+PLLTT+ G KMGK+  GA
Sbjct: 186 LELNRRYGCILQMGGSDQWGNIVNGIDLTRRVLDHEIYGLTTPLLTTSDGRKMGKSQGGA 245

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           IWLN +M SPY FWQ+WRN  DADV  F K  T LP+ E DRM  LQG EINEAK  +A 
Sbjct: 246 IWLNGDMLSPYEFWQFWRNTTDADVGRFLKIFTELPVDECDRMGALQGSEINEAKIRLAN 305

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E+TT++HG E A KA   A E F+       +PT++++ +++  G+ ++ LIVK+G A S
Sbjct: 306 EVTTLLHGAEAAAKAEATAREVFEKGGVGGDLPTLTLTAEDLGDGISVVQLIVKSGLAKS 365

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             EA+R +  N  K++++ +++  L I      S   IKLS GKK H +  L
Sbjct: 366 GKEAKRLIAENGAKLDDAPLTDAGLMIDAAALSSP--IKLSAGKKRHALVQL 415


>gi|149202768|ref|ZP_01879740.1| tyrosyl-tRNA synthetase [Roseovarius sp. TM1035]
 gi|149144050|gb|EDM32084.1| tyrosyl-tRNA synthetase [Roseovarius sp. TM1035]
          Length = 417

 Score =  437 bits (1123), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 211/412 (51%), Positives = 283/412 (68%), Gaps = 2/412 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KS+FL+++  RG++   ++ + LD   S G VTAYIGYD TA SLH GHL  +M+L WLQ
Sbjct: 6   KSEFLNVMMSRGYLADCTDYQGLDEALSAGTVTAYIGYDATAKSLHVGHLLNIMMLRWLQ 65

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           KTGH+PI+LMGGGT+ +GDPSFR + R ++   +I +NI  +  +F+ ++ YG G  DA+
Sbjct: 66  KTGHRPITLMGGGTTKVGDPSFRSDERPLLSPAQIDDNIAGMNRVFARYLAYGEGPQDAM 125

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           MLNN  WL  + Y++ LR+IG  FSVNRMLSFESV+SRL REQSLSFLEFNYMILQAYDF
Sbjct: 126 MLNNAEWLDGLNYLEFLRDIGRHFSVNRMLSFESVKSRLDREQSLSFLEFNYMILQAYDF 185

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL + + C LQMGGSDQWGNII GIDL  R+   ++F LTSPLLTT+ G KMGK+  GA
Sbjct: 186 LELNRRHGCVLQMGGSDQWGNIINGIDLTRRVIDHEVFGLTSPLLTTSDGRKMGKSAGGA 245

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WL+ +M SPY FWQ+WRN  DAD   F K  T LP+ E DR+  L+G +IN AK I+A 
Sbjct: 246 VWLSGDMLSPYEFWQFWRNTTDADTGRFLKLYTELPVEECDRLGALEGSDINAAKIILAN 305

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
            +TT++HG E A  A   A E F+       +PT+ ++ DE++ G+ ++ LIV+AG A S
Sbjct: 306 AVTTLLHGPEAAAAAEATAREVFEHGGVGDDLPTVEVTADELAEGISIVQLIVRAGLAKS 365

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             EA+R +  N  ++++  +++  L I       T  IKLS GKK H +  L
Sbjct: 366 GKEAKRLITENGARLDDEPLTDAGLMIDAAAL--TSPIKLSAGKKRHALVKL 415


>gi|294011411|ref|YP_003544871.1| tyrosyl-tRNA synthetase [Sphingobium japonicum UT26S]
 gi|292674741|dbj|BAI96259.1| tyrosyl-tRNA synthetase [Sphingobium japonicum UT26S]
          Length = 405

 Score =  437 bits (1123), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 210/411 (51%), Positives = 278/411 (67%), Gaps = 11/411 (2%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M ++ SD L +L  RG+IHQ+++   LD L +  VV  YIG+D TA SLH GHL  +M+L
Sbjct: 1   MTSYSSDLLRLLDARGYIHQLTDAEGLDALAAGQVVPGYIGFDPTAPSLHVGHLVSIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             LQK GHKPI LMGGGT  IGDPSF+DE+R+++ +  I +N+  IK +F  F+ +G G 
Sbjct: 61  RQLQKAGHKPIVLMGGGTGKIGDPSFKDEARKLLTTDAIAQNVASIKRVFERFLTFGDGP 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           TDA+ML+N  WL  ++YI  LR+IG  FSVNRMLSF+SV+ RL REQSLSFLEFNYMILQ
Sbjct: 121 TDAIMLDNAEWLDRLEYIPFLRDIGQHFSVNRMLSFDSVKLRLDREQSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDF+EL++   CRLQMGGSDQWGNI+ G++L  R+   ++F LT+PLLT A GTKMGKT
Sbjct: 181 AYDFLELSRRSACRLQMGGSDQWGNIVNGVELTRRVDGTQVFGLTTPLLTNADGTKMGKT 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           + GA+WLN++  S Y++WQ+WRN  DADV +  +  T LPM E++R+A LQG EINEAKK
Sbjct: 241 VGGAVWLNEDQLSSYDYWQFWRNTADADVANRLRLFTDLPMDEVERLAALQGAEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+A E T +  G + A  AA  A   F+      ++PT S+     + G+ ++      G
Sbjct: 301 ILANEATALCRGADAAAAAAETARRTFEEGASDANLPTASLG----AEGLNIVQGTTALG 356

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           FA S  E RR L   AI++N  ++S+  L +K  D       KLSFG K H
Sbjct: 357 FAASNKEVRRKLAEGAIRVNGEVVSDPALPLKAGD-------KLSFGAKKH 400


>gi|126725366|ref|ZP_01741208.1| tyrosyl-tRNA synthetase [Rhodobacterales bacterium HTCC2150]
 gi|126704570|gb|EBA03661.1| tyrosyl-tRNA synthetase [Rhodobacterales bacterium HTCC2150]
          Length = 416

 Score =  437 bits (1123), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 212/412 (51%), Positives = 283/412 (68%), Gaps = 2/412 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KS+F+ ++ +RGF+   ++ + LD    +GVV AYIG+D TASSLH G L Q+M+L WLQ
Sbjct: 6   KSEFMRVMMQRGFLADCTDYQALDDALLEGVVPAYIGFDATASSLHVGSLIQIMMLRWLQ 65

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           KTGHKPI LMGGGT+ +GDPSFR + R ++  ++I ENI  I+ +F+S++++G   TDA 
Sbjct: 66  KTGHKPIVLMGGGTTKVGDPSFRADERPLLTPEKIDENIAGIRKVFTSYVQFGDEPTDAK 125

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           +LNN  WL  + Y+D LR+IG  FSVNRML+FESV+SRL REQSLSFLEFNYMILQAYDF
Sbjct: 126 ILNNAEWLDGLNYLDFLRDIGRHFSVNRMLAFESVKSRLDREQSLSFLEFNYMILQAYDF 185

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL + Y C LQMGGSDQWGNI+ GIDL  R+   ++F LTSPLLTT+ G KMGK+L GA
Sbjct: 186 LELNRRYGCLLQMGGSDQWGNIVNGIDLTRRVLDHQIFGLTSPLLTTSDGKKMGKSLDGA 245

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WLN +M SPY FWQ+WRN  DADV  F K  T + + E DR+  L G EIN AK ++A 
Sbjct: 246 VWLNPDMRSPYEFWQFWRNTTDADVGRFLKLYTEIDVEECDRLGALDGAEINAAKVVLAN 305

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
            +TT+ HG E A  A   A E F+       +PTIS++  ++  G+ ++ L VK+G + S
Sbjct: 306 AVTTLAHGAEAAAAAEATAREVFEKGGVGDDLPTISLTAADIGDGISIVQLFVKSGLSKS 365

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             +A+R +  N  K+N++ I    + I + D      IKLS GKK H +  L
Sbjct: 366 GKDAKRLIAENGAKMNDADIDGAGVLITVADL--VEPIKLSAGKKRHALVTL 415


>gi|83593367|ref|YP_427119.1| tyrosyl-tRNA synthetase [Rhodospirillum rubrum ATCC 11170]
 gi|97201869|sp|Q2RSR3|SYY_RHORT RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|83576281|gb|ABC22832.1| tyrosyl-tRNA synthetase [Rhodospirillum rubrum ATCC 11170]
          Length = 418

 Score =  436 bits (1121), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 210/416 (50%), Positives = 282/416 (67%), Gaps = 1/416 (0%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M A KS+FL+++ +RGFIHQ ++   LD L ++G V+AYIG+D TA SLH G L Q+MLL
Sbjct: 1   MTAPKSEFLAVVRDRGFIHQCTDLDGLDALLAKGPVSAYIGFDCTADSLHVGSLIQIMLL 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            WLQ+TGH+P+ LMGGGT+ IGDPSFRDE+R ++  ++I +N+  I+ +FS F+ +G G 
Sbjct: 61  HWLQRTGHRPVVLMGGGTTRIGDPSFRDEARPLLTDEKIGQNMAGIRQVFSRFLSFGEGA 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           TDA+M+NN  WL  + YI  LR+ G  FSVNRML+F+SVR RL REQ LSFLEFNYMILQ
Sbjct: 121 TDAVMVNNADWLDGLAYIPFLRDFGRHFSVNRMLTFDSVRLRLDREQPLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDF+EL +    RLQMGGSDQWGNI+ G++LG R+   +LF LTSPL+TTASG KMGKT
Sbjct: 181 AYDFLELGRRTGVRLQMGGSDQWGNIVNGVELGRRVDGLELFGLTSPLITTASGAKMGKT 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
             GA+WLN+     Y++WQ+WRN +DADV  F +  T LP+ E+ R+  L G EINEAKK
Sbjct: 241 AQGAVWLNEARLPAYDYWQFWRNTEDADVGRFLRLFTDLPLDEVARLEALGGAEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+A   TTM HG E A  AA  A + F+       +PT  ++ + ++ G+ L  ++   G
Sbjct: 301 ILAERATTMAHGPEAALTAAETARKVFEQGGTGDALPTHDVAAEALAAGLPLAEMMRATG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            A S  E +R +     +IN+  +S+    +   D    G IKLS GKK H +  +
Sbjct: 361 LAASGKEVKRLVSEGGARINDVAVSDAARLLGPADVQD-GAIKLSAGKKRHALIRV 415


>gi|304570804|ref|YP_002517319.2| tyrosyl-tRNA synthetase [Caulobacter crescentus NA1000]
          Length = 441

 Score =  436 bits (1121), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 204/412 (49%), Positives = 275/412 (66%), Gaps = 1/412 (0%)

Query: 3   AFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
           +FKS+FL  L  RG+IHQI++  ELD     G + AYIG+D TA SLH G L Q+MLL  
Sbjct: 28  SFKSEFLRTLEARGYIHQITHADELDTAAQGGPIVAYIGFDATAPSLHVGSLIQIMLLRR 87

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD 122
           LQ+ GHKPI LMGGGT+ +GDP+ +DESR+++   +IQ NI  IK +FS F+ +G G TD
Sbjct: 88  LQQAGHKPIVLMGGGTTKVGDPTGKDESRKLLSDADIQANIAGIKTVFSKFLTFGDGPTD 147

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
           A+M++N+ WL    Y+  LRE G  F+VNRML+F+SV+ RL+REQ ++FLEFNYM++QA 
Sbjct: 148 AIMVDNDVWLSKFGYVQFLREYGVHFTVNRMLAFDSVKLRLEREQPMTFLEFNYMLMQAV 207

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DF+EL + + C LQMGGSDQWGNI+ G++L  R+     F LT+PLL TASG KMGKT +
Sbjct: 208 DFLELNRAHGCVLQMGGSDQWGNILNGVELTRRVDQKSAFGLTTPLLATASGAKMGKTAA 267

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKII 302
           GA+WLN E  SPY++WQ+WRN +DADV  F K  T LP+  I  +  L+G +INEAKK++
Sbjct: 268 GAVWLNAEQLSPYDYWQFWRNTEDADVGRFLKLFTDLPLDRIAELEALEGAQINEAKKVL 327

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFA 362
           A E T M HG EEA KA  AA + F+    S  +PT  I+  ++  G+ L  L   AG A
Sbjct: 328 ADEATRMAHGEEEARKARDAAEKAFEQGALSADLPTYEIAAADLDAGVVLAALFADAGLA 387

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            S  EARR  +   +K+N+   ++    I   D    G +KL+ GKK  ++ 
Sbjct: 388 GSRGEARRLAQGGGLKVNDKAEADANRLITAADL-VEGVVKLAAGKKKIVLV 438


>gi|16126113|ref|NP_420677.1| tyrosyl-tRNA synthetase [Caulobacter crescentus CB15]
 gi|81535267|sp|Q9A756|SYY_CAUCR RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|254783578|sp|B8GWL9|SYY_CAUCN RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|13423313|gb|AAK23845.1| tyrosyl-tRNA synthetase [Caulobacter crescentus CB15]
 gi|220964055|gb|ACL95411.1| tyrosyl-tRNA synthetase [Caulobacter crescentus NA1000]
          Length = 419

 Score =  436 bits (1120), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 204/412 (49%), Positives = 275/412 (66%), Gaps = 1/412 (0%)

Query: 3   AFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
           +FKS+FL  L  RG+IHQI++  ELD     G + AYIG+D TA SLH G L Q+MLL  
Sbjct: 6   SFKSEFLRTLEARGYIHQITHADELDTAAQGGPIVAYIGFDATAPSLHVGSLIQIMLLRR 65

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD 122
           LQ+ GHKPI LMGGGT+ +GDP+ +DESR+++   +IQ NI  IK +FS F+ +G G TD
Sbjct: 66  LQQAGHKPIVLMGGGTTKVGDPTGKDESRKLLSDADIQANIAGIKTVFSKFLTFGDGPTD 125

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
           A+M++N+ WL    Y+  LRE G  F+VNRML+F+SV+ RL+REQ ++FLEFNYM++QA 
Sbjct: 126 AIMVDNDVWLSKFGYVQFLREYGVHFTVNRMLAFDSVKLRLEREQPMTFLEFNYMLMQAV 185

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DF+EL + + C LQMGGSDQWGNI+ G++L  R+     F LT+PLL TASG KMGKT +
Sbjct: 186 DFLELNRAHGCVLQMGGSDQWGNILNGVELTRRVDQKSAFGLTTPLLATASGAKMGKTAA 245

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKII 302
           GA+WLN E  SPY++WQ+WRN +DADV  F K  T LP+  I  +  L+G +INEAKK++
Sbjct: 246 GAVWLNAEQLSPYDYWQFWRNTEDADVGRFLKLFTDLPLDRIAELEALEGAQINEAKKVL 305

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFA 362
           A E T M HG EEA KA  AA + F+    S  +PT  I+  ++  G+ L  L   AG A
Sbjct: 306 ADEATRMAHGEEEARKARDAAEKAFEQGALSADLPTYEIAAADLDAGVVLAALFADAGLA 365

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            S  EARR  +   +K+N+   ++    I   D    G +KL+ GKK  ++ 
Sbjct: 366 GSRGEARRLAQGGGLKVNDKAEADANRLITAADL-VEGVVKLAAGKKKIVLV 416


>gi|329889566|ref|ZP_08267909.1| tyrosyl-tRNA synthetase [Brevundimonas diminuta ATCC 11568]
 gi|328844867|gb|EGF94431.1| tyrosyl-tRNA synthetase [Brevundimonas diminuta ATCC 11568]
          Length = 426

 Score =  435 bits (1119), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 205/412 (49%), Positives = 286/412 (69%), Gaps = 1/412 (0%)

Query: 3   AFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
           AFKSDFL ++  RG+IHQI++P ELD   + GVVT YIG+D TA SLH GHL Q+MLL  
Sbjct: 13  AFKSDFLRLMKARGYIHQITHPVELDEAAASGVVTGYIGFDATAPSLHVGHLIQIMLLRR 72

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD 122
           LQ+ GHKPI LMGGGT+ +GDPSF+D  R ++  ++I ENI  IKG+F  F+ +G G TD
Sbjct: 73  LQQAGHKPIVLMGGGTTKVGDPSFKDTQRPLLTEEKIAENIAGIKGVFEKFLTFGDGPTD 132

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
           A+ML+N+ WL  + Y+  LR+ G+ F++NRMLSF+SV+ RL REQ L+FLEFNYM++QA 
Sbjct: 133 AVMLDNDEWLSQLGYLQFLRDYGTHFTINRMLSFDSVKLRLDREQPLTFLEFNYMLMQAT 192

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DF+EL + Y C LQMGGSDQWGNII G++L  ++     F LT+PLL+TASG KMGKT+ 
Sbjct: 193 DFLELNRRYGCSLQMGGSDQWGNIINGVELTRKVDHKAAFGLTTPLLSTASGQKMGKTVG 252

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKII 302
           GA+WLN +  SP+++WQYWRN +D DV  F +  T LP+ +I+R   L+G EIN+AKK +
Sbjct: 253 GAVWLNADALSPFDYWQYWRNTEDGDVGRFMRLFTDLPLDQIERYEALEGAEINDAKKAL 312

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFA 362
           A   T+M+HG E A+ A  AA   F+    S  +PT+ + +DEV   M +  +  KAG +
Sbjct: 313 ADATTSMLHGVEAAQAARAAAEAAFEKGQLSADLPTVELPRDEVIGAM-IAAVTTKAGLS 371

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            S  EARR  +   +++N+ ++++    I+  D ++ G +KL  GKK  ++ 
Sbjct: 372 ASNGEARRLAQGGGLRLNDEVVNDGARLIEEADLNTDGVLKLGAGKKKLVLV 423


>gi|254464861|ref|ZP_05078272.1| tyrosyl-tRNA synthetase [Rhodobacterales bacterium Y4I]
 gi|206685769|gb|EDZ46251.1| tyrosyl-tRNA synthetase [Rhodobacterales bacterium Y4I]
          Length = 418

 Score =  435 bits (1118), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 218/415 (52%), Positives = 284/415 (68%), Gaps = 3/415 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KSDF++++ ERGF+   ++ + LD    QGV  AYIG+D TA SLH G L Q+M+L W Q
Sbjct: 6   KSDFVAVMMERGFLADCTDYQGLDEALLQGVRPAYIGFDATAKSLHVGSLIQIMMLRWFQ 65

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD-A 123
           KTGH+PI+LMGGGT+ +GDPSFR + R ++   +I ENI  IK +FS++I Y T   + A
Sbjct: 66  KTGHQPITLMGGGTTKVGDPSFRADERPLLTEAQIDENIAGIKKVFSAYIDYDTDAPNKA 125

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           LMLNN  WL  + Y++ LR+IG  FSVNRMLSFESV+SRL REQSLSFLEFNYMILQAYD
Sbjct: 126 LMLNNAEWLDGLNYLEFLRDIGRHFSVNRMLSFESVKSRLDREQSLSFLEFNYMILQAYD 185

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+EL + Y C LQMGGSDQWGNI+ GIDL  R+   +++ LTSPLLTT+ G KMGKT  G
Sbjct: 186 FMELNRRYGCILQMGGSDQWGNIVNGIDLTRRVIDHEVYGLTSPLLTTSDGKKMGKTADG 245

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIA 303
           AIWLN +M SPY FWQ+WRN  DADV  F K  T LP++E +R+  L G EIN AK I+A
Sbjct: 246 AIWLNADMRSPYEFWQFWRNTTDADVGRFLKLYTELPVAECERLGALAGSEINAAKVILA 305

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
            E+TT+ HG + A  A   A E F+       +PT+S+S  ++  G+ ++ LIVK+G A 
Sbjct: 306 NEVTTLCHGADAAAAAEATAREVFEKGGVGDDLPTLSLSPADLGDGISIVQLIVKSGLAK 365

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLCG 418
           S  +A+R +  +  KI++  +++  L I       T  IKLS GKK H +  L G
Sbjct: 366 SGKDAKRLIAEHGAKIDDQPLTDAGLIIDAGAL--TSPIKLSAGKKRHALVRLDG 418


>gi|209964922|ref|YP_002297837.1| tyrosyl-tRNA synthetase TyrS [Rhodospirillum centenum SW]
 gi|209958388|gb|ACI99024.1| tyrosyl-tRNA synthetase TyrS [Rhodospirillum centenum SW]
          Length = 420

 Score =  434 bits (1117), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 212/415 (51%), Positives = 281/415 (67%), Gaps = 3/415 (0%)

Query: 1   MPA-FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLML 59
           +PA  KSDFL I+ ERG+ HQ ++   LD     G +  Y GYD TA SLH GHL   M+
Sbjct: 5   VPASVKSDFLRIMLERGYYHQATDLEALDKALLAGGLVGYNGYDATADSLHVGHLLPTMI 64

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG 119
             WLQKTG +PI LMGGGT+ IGDPS RDE+R+++  + I  NI  I+ +F     +G  
Sbjct: 65  QRWLQKTGGRPILLMGGGTTRIGDPSGRDETRQLLTDEVIAANIAGIRTVFDRLFDFG-- 122

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
            + A ++NN  WL  ++YI  LR+IG  F++NRML+F+SVR RL REQ L+FLEFNYMIL
Sbjct: 123 PSGARLVNNAEWLDRLEYISFLRDIGRHFTINRMLTFDSVRLRLDREQPLTFLEFNYMIL 182

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK 239
           QAYDFVEL++ Y C LQ GGSDQWGNI+ G+DLG R+    LF LT PLLTTASG KMGK
Sbjct: 183 QAYDFVELSRRYGCVLQTGGSDQWGNIVNGVDLGRRIANRDLFGLTCPLLTTASGAKMGK 242

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAK 299
           T +GA+WLN+E  S ++FWQYWRN +DADV  F K  T LP+ EI R+  LQG EINEAK
Sbjct: 243 TAAGAVWLNRERLSDWDFWQYWRNTEDADVGRFLKLFTELPLDEIARLEALQGAEINEAK 302

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKA 359
           KI+ATE+T +V G E A+ AA  A   F+    ++ +PT+ +  DE++ G+ +  L+ KA
Sbjct: 303 KILATEVTRLVRGDEAADAAAETARRTFEQGALAEGLPTVELPADELAAGVAVYGLLAKA 362

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           G   S  EARR +K  A+++N+  +++E  ++   D  + G IKLS G+K H + 
Sbjct: 363 GLVASNGEARRQIKQAAVRVNDQPVTDEFAKVGSGDLTADGVIKLSVGRKRHALV 417


>gi|134284884|gb|ABO69544.1| TyrS [Magnetospirillum gryphiswaldense MSR-1]
          Length = 416

 Score =  434 bits (1116), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 208/414 (50%), Positives = 286/414 (69%), Gaps = 1/414 (0%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M   +S+FL +++ERG++HQ ++   LD   +QG   AYIG+D TA SLH G L Q+MLL
Sbjct: 1   MTTARSEFLRVVAERGYMHQCTDLEALDKRLNQGPAAAYIGFDCTAESLHVGGLMQIMLL 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            W QKTG+KPI LMGGGT+ IGDP+ +DE+R+M+    I  N+  IK +F+ ++ +G G 
Sbjct: 61  RWWQKTGNKPIVLMGGGTTRIGDPTGKDEARKMLDDAAIARNMAGIKQVFAKYLTFGDGA 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           TDA+M+NN  WL  + YI  LR+ G  F++NRML+F+SV+ RL+REQ L+FLEFNYMILQ
Sbjct: 121 TDAMMVNNADWLDQLNYISFLRDYGKHFTINRMLTFDSVKLRLEREQPLTFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
            YDF EL   + C LQMGGSDQWGNII G++LG R+   +LF LTSPLLTT+SG KMGKT
Sbjct: 181 GYDFAELWSRHKCVLQMGGSDQWGNIINGVELGRRVHQAELFGLTSPLLTTSSGAKMGKT 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           + GA+WLN +M S + FWQYWRN +DADV  F K  T LP+ EI R+  LQG EINEAKK
Sbjct: 241 VGGAVWLNADMLSAWEFWQYWRNTEDADVGRFLKLYTELPLDEIARLEALQGAEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+A E+T + HG + A +AA  A + F+    + ++PTI+I   +++ G+    L V+AG
Sbjct: 301 ILANEVTRLCHGEDAAREAAETARKTFEEGALADNLPTIAIPAADLNAGIPAFALFVRAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +TS  EARR L+    ++N++ +++    I   D    G IKL+ GKK +++ 
Sbjct: 361 LSTSNGEARRLLQQGGGRVNDAQVTDPAAPIG-ADALKDGVIKLTAGKKRNVLV 413


>gi|86138669|ref|ZP_01057242.1| tyrosyl-tRNA synthetase [Roseobacter sp. MED193]
 gi|85824729|gb|EAQ44931.1| tyrosyl-tRNA synthetase [Roseobacter sp. MED193]
          Length = 418

 Score =  433 bits (1114), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 214/413 (51%), Positives = 283/413 (68%), Gaps = 3/413 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KSDF++++ ERGF+   ++ + LD    QGV  AYIG+D TA SLH G L Q+M+L W Q
Sbjct: 6   KSDFVAVMMERGFLADCTDYQGLDEALMQGVKPAYIGFDATAKSLHVGSLIQIMMLRWFQ 65

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD-A 123
           KTGH+PI+LMGGGT+ +GDPSFR + R ++   +I +NI  IK +FS++I Y +   + A
Sbjct: 66  KTGHQPITLMGGGTTKVGDPSFRADERPLLTEAQIDDNIAGIKKVFSAYIDYDSDAPNKA 125

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           LMLNN  WL  + Y++ LR+IG  FSVNRML+FESV+SRL REQSLSFLEFNYMILQAYD
Sbjct: 126 LMLNNAEWLDGLNYLEFLRDIGRHFSVNRMLAFESVKSRLDREQSLSFLEFNYMILQAYD 185

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+EL + Y C LQMGGSDQWGNI+ GIDL  R+    ++ LTSPLLTT+ G KMGK+  G
Sbjct: 186 FLELNRRYGCILQMGGSDQWGNIVNGIDLTRRVLDNSIYGLTSPLLTTSDGKKMGKSQDG 245

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIA 303
           A+WLN +M SPY FWQ+WRN  DADV  F K  T LP+ E DR+  L G E+N AK I+A
Sbjct: 246 AVWLNADMRSPYEFWQFWRNTTDADVGRFLKLYTELPVDECDRLGALAGSEVNAAKVILA 305

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
            E+T ++HG E A  A   A E F+     + +PT+S+S +E+  G+ ++ LIVK+G A 
Sbjct: 306 NEVTKLLHGAEAAVAAEATAREVFEKGGIGEDLPTLSLSSEELGDGISIVQLIVKSGLAK 365

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           S  +A+R +  N  K+++  + +  L I   D  S   IKLS GKK H +  L
Sbjct: 366 SGKDAKRLINENGAKLDDKPLMDAGLMITATDLSSP--IKLSAGKKRHALVQL 416


>gi|288959225|ref|YP_003449566.1| tyrosyl-tRNA synthetase [Azospirillum sp. B510]
 gi|288911533|dbj|BAI73022.1| tyrosyl-tRNA synthetase [Azospirillum sp. B510]
          Length = 428

 Score =  433 bits (1114), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 214/421 (50%), Positives = 288/421 (68%), Gaps = 5/421 (1%)

Query: 3   AFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
           A  S+FL  L ERGFIHQ ++   LD    +G + AYIG+D TA SLH G L  +M+L W
Sbjct: 8   APASEFLRTLQERGFIHQCTDLATLDERARKGPIVAYIGFDCTAESLHVGSLLPIMMLRW 67

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY---GT- 118
           LQKTGHKPI LMGGGT+ IGDPS +DE+R+++  + I  N+  IK IF  ++ +   GT 
Sbjct: 68  LQKTGHKPIVLMGGGTTKIGDPSGKDEARQLLTDEVIAGNMAGIKRIFGRYLTFAPEGTT 127

Query: 119 -GKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYM 177
            G TDA+M+NN  WL  +KYI LLR+IG  F++NRM++F+SV+ RL+REQ L+FLEFNYM
Sbjct: 128 GGPTDAVMVNNADWLDELKYIPLLRDIGRHFTINRMMTFDSVKLRLEREQPLTFLEFNYM 187

Query: 178 ILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
           ILQAYDFVEL + + C LQMGGSDQWGNI+ G++LG R    +LF LT+PLLTT+SG KM
Sbjct: 188 ILQAYDFVELKRRHGCSLQMGGSDQWGNIVNGVELGRRTDGAELFGLTTPLLTTSSGAKM 247

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE 297
           GKT +GAIWL  +    Y FWQYWRN +DADV  F +  T LP+ E+ R+  LQG EINE
Sbjct: 248 GKTAAGAIWLTADKLGSYEFWQYWRNTEDADVGRFLRLYTELPLDEVARLESLQGAEINE 307

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
           AKKI+A E+T + HG E A +AA  A   F+    +  +P+I +++ ++  G+ ++ L+V
Sbjct: 308 AKKILANEVTRLAHGEEAALEAAETARRAFEEGAAADGLPSIEVARADLEAGLPVVDLLV 367

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            AG A S  EARR +K    K+N+  I++E  +    D ++ G +KLS GKK H +  + 
Sbjct: 368 SAGLAASKGEARRLIKGGGAKLNDGPIADETAKATAADLNADGVVKLSAGKKRHALVKVG 427

Query: 418 G 418
           G
Sbjct: 428 G 428


>gi|254511424|ref|ZP_05123491.1| tyrosyl-tRNA synthetase [Rhodobacteraceae bacterium KLH11]
 gi|221535135|gb|EEE38123.1| tyrosyl-tRNA synthetase [Rhodobacteraceae bacterium KLH11]
          Length = 417

 Score =  433 bits (1113), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 218/413 (52%), Positives = 284/413 (68%), Gaps = 3/413 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KSDF++ + ERGF+   ++ + LD     G   AYIG+D TA SLH G L Q+M+L W Q
Sbjct: 6   KSDFIATMIERGFLADCTDYQGLDEALISGCKPAYIGFDATARSLHVGSLIQIMMLRWFQ 65

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT-GKTDA 123
           KTGH+PI+LMGGGT+ +GDPSFR + R ++  ++I ENI  IK +FS++I Y +  +  A
Sbjct: 66  KTGHQPITLMGGGTTKVGDPSFRADERPLLGPEQIDENIAGIKKVFSAYIDYDSDAENKA 125

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           LMLNN  WL  + Y+D LR+IG  FSVNRMLSFESV+SRL REQSLSFLEFNYMILQAYD
Sbjct: 126 LMLNNAEWLDDLNYLDFLRDIGRHFSVNRMLSFESVKSRLDREQSLSFLEFNYMILQAYD 185

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+EL + Y C LQMGGSDQWGNI+ GIDL  R+   +++ LTSPLLTT+ G KMGK+  G
Sbjct: 186 FLELNRRYGCVLQMGGSDQWGNIVNGIDLTRRVLDHEIYGLTSPLLTTSDGKKMGKSQDG 245

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIA 303
           A+WLN EM SPY FWQ+WRN  DADV  F K  T LP+ E +R+  LQG EINEAK  +A
Sbjct: 246 AVWLNAEMRSPYEFWQFWRNTTDADVGRFLKLYTELPVEECNRLGALQGAEINEAKIRLA 305

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
            E+TT++HG E A KA   A E F+       +PT+++S  E+  GM ++ +IVK+G A 
Sbjct: 306 NEVTTLLHGAEAAAKAEATAREVFEKGGVGGDLPTLTLSAAELGDGMSIVQVIVKSGLAK 365

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           S  EA+R +  N  K++++ +++  L I      S   IKLS GKK H +  L
Sbjct: 366 SGKEAKRLIAENGAKLDDAPLTDAGLMIDAGALSSP--IKLSAGKKRHALVQL 416


>gi|294677248|ref|YP_003577863.1| tyrosyl-tRNA synthetase [Rhodobacter capsulatus SB 1003]
 gi|294476068|gb|ADE85456.1| tyrosyl-tRNA synthetase [Rhodobacter capsulatus SB 1003]
          Length = 416

 Score =  432 bits (1112), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 209/412 (50%), Positives = 279/412 (67%), Gaps = 2/412 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KS+FL ++ ERGF+   ++ +ELD   + G+VT YIGYD TA+SLH GHL  +MLL W Q
Sbjct: 6   KSEFLRVIIERGFLADCTDLQELDTALAGGMVTCYIGYDATAASLHVGHLLNIMLLRWFQ 65

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           KTGHKPI+LMGGGT+ +GDPSFR E R ++  + I ENI  ++ +F+ ++ Y      AL
Sbjct: 66  KTGHKPITLMGGGTTKVGDPSFRSEERPLLTPERIDENIAGMQRVFARYLDYKDDGNGAL 125

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M NN  WL  + Y++ LR+IG  FSVNRMLSFESV+SRL REQSLSFLEFNYMILQAYDF
Sbjct: 126 MRNNAEWLDDLNYLEFLRDIGRHFSVNRMLSFESVKSRLDREQSLSFLEFNYMILQAYDF 185

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL + Y C LQMGGSDQWGNI+ GIDL  R+   ++F LT+PLLTT+ G KMGK+  GA
Sbjct: 186 LELNRRYGCLLQMGGSDQWGNIVNGIDLTRRVLDREIFGLTTPLLTTSDGRKMGKSQGGA 245

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WLN EM SPY FWQ+WRN  DADV  F K  T LP+ E DR+ KL+G EIN AK I+A 
Sbjct: 246 VWLNGEMLSPYEFWQFWRNTTDADVGRFLKLYTDLPVEECDRLGKLEGSEINGAKIILAN 305

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E+TT++HG E A  A   A E F+     + +P +++  +E++ G+ L  L+V++G A +
Sbjct: 306 EVTTLLHGAEAAAAAEATAREVFEKGGVGEDLPRLTLGAEELAEGISLAQLVVRSGLAKT 365

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             + +R +    +K+++ I  +        D      +KLS GKK H +  L
Sbjct: 366 GKDGKRLISEGGLKVDDEICLDAGRMFSAADLAQP--VKLSAGKKRHALVSL 415


>gi|119384647|ref|YP_915703.1| tyrosyl-tRNA synthetase [Paracoccus denitrificans PD1222]
 gi|189083666|sp|A1B3B3|SYY_PARDP RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|119374414|gb|ABL70007.1| tyrosyl-tRNA synthetase [Paracoccus denitrificans PD1222]
          Length = 414

 Score =  432 bits (1111), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 210/413 (50%), Positives = 282/413 (68%), Gaps = 6/413 (1%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KSDFL+++ ERG++   ++ + LD     G VTAYIGYD TA+SLH GHL  +M+L W Q
Sbjct: 6   KSDFLNVMIERGYLADCTDMQALDDALIDGPVTAYIGYDATAASLHVGHLLNIMMLRWFQ 65

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           KTG++PI+LMGGGT+ +GDPSFR E R ++   +I ENI  +K +F+ ++ YG     A+
Sbjct: 66  KTGNRPITLMGGGTTKVGDPSFRSEERPLLTPDKIDENIAGMKQVFARYLDYG--DQGAM 123

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           MLNN  WL S+ Y+D LR+IG  FSVNRMLSFESV+SRL REQSLSFLEFNYMILQAYDF
Sbjct: 124 MLNNAEWLDSLNYLDFLRDIGRHFSVNRMLSFESVKSRLDREQSLSFLEFNYMILQAYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL + Y CRLQMGGSDQWGNI+ GIDL  R+   +++ LTSPLLTT+ G KMGK+  GA
Sbjct: 184 LELYRRYGCRLQMGGSDQWGNIVNGIDLTRRVLDAEIWGLTSPLLTTSDGRKMGKSAGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WLN  M SPY FWQ+WRN  DADV  F K  T LP+ E DR+  L G EIN AK I+A 
Sbjct: 244 VWLNGAMLSPYEFWQFWRNTTDADVGRFLKLYTELPVEECDRLGALSGSEINAAKIILAN 303

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E+TT++HG + A  A   A E F+       +  +++S D ++ G+ ++ L+ + G   S
Sbjct: 304 EVTTLLHGADAAASAEATAREVFEQGGAGGDLEVVTLSADALASGLTVVQLLAQTGITAS 363

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN-IKLSFGKKNHIICHL 416
             EA+R +    +++NN  +S+ +L +   D    G+ +K+S GKK H +  L
Sbjct: 364 GKEAKRLIAEGGLRLNNEAVSDPQLAV---DAALIGDGLKVSVGKKKHRMVQL 413


>gi|260753802|ref|YP_003226695.1| tyrosyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis NCIMB
           11163]
 gi|258553165|gb|ACV76111.1| tyrosyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis NCIMB
           11163]
          Length = 409

 Score =  432 bits (1110), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 212/415 (51%), Positives = 284/415 (68%), Gaps = 8/415 (1%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  F+SDFL +L  RG+IHQI++ + LD   SQ V+ AYIG+D TA+SLH G L Q+M+L
Sbjct: 1   MTQFRSDFLRLLETRGYIHQITDAKSLDEKASQSVIAAYIGFDPTAASLHVGSLLQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             LQ+ GHKPI LMGGGT  IGDPSF+DE+R+++    I+ NI  IK +F  F+ +G G+
Sbjct: 61  RRLQQAGHKPIVLMGGGTGKIGDPSFKDEARKLLDEDTIKANIASIKRVFEHFLHFGDGE 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
            DA+M++N  WL  ++YI  LR++G  FSVNRMLSF+SV+ RL REQSLSFLEFNYMILQ
Sbjct: 121 NDAVMVDNAEWLDRLEYIPFLRDVGQHFSVNRMLSFDSVKLRLDREQSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDF+EL++ +   LQ+GGSDQWGNI+ GI+L  R+   ++F LTSPL+TTA G KMGKT
Sbjct: 181 AYDFLELSRRFGVCLQLGGSDQWGNIVNGIELARRMDGKEVFGLTSPLMTTADGVKMGKT 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           + GAIWLN +M SPY++WQ+WRN  DADV  F K  T LP+ EI R+A L+G EINEAKK
Sbjct: 241 VGGAIWLNGDMCSPYDYWQFWRNTHDADVERFLKLFTDLPLDEIARLAALEGSEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+A E T + HG + AE+AA  A + F+       +P + +S   +S    L+  +V  G
Sbjct: 301 ILANEATKLAHGEKAAEEAAATAKKTFEEGAAGDALPVMKVSDSSIS----LVDALVGLG 356

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
              S  EARR ++    +IN     +EK  I++    +  NI++S GKK H +  
Sbjct: 357 LVASKAEARRMIRGGGARINGEKALDEKAVIEV----TAENIRISAGKKAHGVIQ 407


>gi|94495561|ref|ZP_01302141.1| tyrosyl-tRNA synthetase [Sphingomonas sp. SKA58]
 gi|94424949|gb|EAT09970.1| tyrosyl-tRNA synthetase [Sphingomonas sp. SKA58]
          Length = 411

 Score =  432 bits (1110), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 210/411 (51%), Positives = 280/411 (68%), Gaps = 11/411 (2%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  ++SD L +L ERG+IHQ+++ + LD L ++ VV  YIG+D TA SLH G L Q+M+L
Sbjct: 7   MSHYQSDLLRLLDERGYIHQLTDAQGLDALAARDVVPGYIGFDPTAPSLHVGSLVQIMML 66

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             +Q+ GHKPI LMGGGT  IGDPS RDE+R ++   +I EN+  IK +F  F+ +G G 
Sbjct: 67  RRMQQAGHKPIVLMGGGTGKIGDPSLRDEARSLLTVDKINENVASIKRVFERFLTFGDGP 126

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           +DA+M++N  WL +++YI  LR+IG  FSVNRMLSF+SV+ RL REQSLSFLEFNYMILQ
Sbjct: 127 SDAIMVDNADWLDALEYIPFLRDIGQHFSVNRMLSFDSVKLRLDREQSLSFLEFNYMILQ 186

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDF+EL++   CRLQMGGSDQWGNI+ GI+L  R+   ++F LTSPL+TTA G KMGKT
Sbjct: 187 AYDFLELSRRAGCRLQMGGSDQWGNIVNGIELSRRVDGTQVFGLTSPLITTADGGKMGKT 246

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
             GA+WLN +  SPY++WQ+WRN  DADV  F +  T LP+ EI R+ +L+G EIN+AKK
Sbjct: 247 AKGAVWLNADALSPYDYWQFWRNTQDADVGRFMRLFTDLPLDEIARLERLEGAEINDAKK 306

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           ++A   T M HG + A  AA  A   F+      ++PTIS+     S G+ ++      G
Sbjct: 307 VLADAATAMAHGADAATAAAETARRTFEEGASDANLPTISLG----SEGLSVVQATTGLG 362

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           FATS  E RR L   AIK+N  ++++  + +K  D       KLSFG K H
Sbjct: 363 FATSNKEVRRKLSEGAIKVNGVVVTDPAVLLKAGD-------KLSFGAKKH 406


>gi|126728742|ref|ZP_01744557.1| tyrosyl-tRNA synthetase [Sagittula stellata E-37]
 gi|126710672|gb|EBA09723.1| tyrosyl-tRNA synthetase [Sagittula stellata E-37]
          Length = 429

 Score =  431 bits (1109), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 214/424 (50%), Positives = 283/424 (66%), Gaps = 14/424 (3%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KSDF+ ++ ERG++   ++ + LD   S GVVTAYIGYD TA SLH GHL  +M+L WLQ
Sbjct: 6   KSDFMRVMMERGYLADCTDYQALDDKLSHGVVTAYIGYDATAQSLHVGHLLNIMMLRWLQ 65

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKT--- 121
           KTGH+PI+LMGGGT+ +GDPSFR + R ++  ++I  NI  +K +F+ ++ YG   T   
Sbjct: 66  KTGHRPITLMGGGTTKVGDPSFRSDERPLLGPEQIDANIAGMKQVFAKYLSYGDAPTMPS 125

Query: 122 ---------DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFL 172
                     ALMLNN  WL  + Y+D LR+IG  FSVNRMLSFESV+SRL REQSLSFL
Sbjct: 126 SSEAVGPDNVALMLNNAEWLDDLNYLDFLRDIGRHFSVNRMLSFESVKSRLDREQSLSFL 185

Query: 173 EFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTA 232
           EFNYMILQAYDF+EL + Y C LQMGGSDQWGNI+ GIDL  R+   +++ LTSPLLTT+
Sbjct: 186 EFNYMILQAYDFLELNRRYGCLLQMGGSDQWGNIVNGIDLTRRVLDHEIYGLTSPLLTTS 245

Query: 233 SGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG 292
            G KMGK+  GA+WLN +M SPY FWQ+WRN  DADV  F K  T LP+ E  R+  L G
Sbjct: 246 DGKKMGKSQGGAMWLNADMLSPYEFWQFWRNTTDADVGRFLKLYTELPLEECARLGALAG 305

Query: 293 KEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGL 352
            EINEAK ++A E+TT+ HG E A  A   A E F+       +PT+ ++ +EV  G+ +
Sbjct: 306 SEINEAKIVLANEVTTLCHGSEAAAAAEATAREVFEKGGVGDDLPTLELTSEEVGDGISV 365

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           + LIV++G   S  EA+R +  N  +++++ +++  L +      S   IKLS GKK H 
Sbjct: 366 IQLIVRSGLVKSGKEAKRLIAENGARLDDAPLTDAGLMLDRGALASP--IKLSAGKKRHA 423

Query: 413 ICHL 416
           +  L
Sbjct: 424 LIKL 427


>gi|56552539|ref|YP_163378.1| tyrosyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ZM4]
 gi|241762221|ref|ZP_04760303.1| tyrosyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ATCC
           10988]
 gi|81354696|sp|Q5NLZ3|SYY_ZYMMO RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|56544113|gb|AAV90267.1| tyrosyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ZM4]
 gi|241373268|gb|EER62887.1| tyrosyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ATCC
           10988]
          Length = 409

 Score =  431 bits (1109), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 211/415 (50%), Positives = 284/415 (68%), Gaps = 8/415 (1%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  F+SDFL +L  RG+IHQI++ + LD   SQ V+ AYIG+D TA+SLH G L Q+M+L
Sbjct: 1   MTQFRSDFLRLLETRGYIHQITDAKSLDEKASQSVIAAYIGFDPTAASLHVGSLLQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             LQ+ GHKPI LMGGGT  IGDPSF+DE+R+++    I+ NI  IK +F  F+ +G G+
Sbjct: 61  RRLQQAGHKPIVLMGGGTGKIGDPSFKDEARKLLDEDTIKANIASIKRVFEHFLHFGDGE 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
            DA+M++N  WL  ++YI  LR++G  FSVNRMLSF+SV+ RL REQSLSFLEFNYMILQ
Sbjct: 121 NDAVMVDNAEWLDRLEYIPFLRDVGQHFSVNRMLSFDSVKLRLDREQSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDF+EL++ +   LQ+GGSDQWGNI+ GI+L  R+   ++F LTSPL+TTA G KMGKT
Sbjct: 181 AYDFLELSRRFGVCLQLGGSDQWGNIVNGIELARRMDGKEVFGLTSPLMTTADGVKMGKT 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           + GA+WLN +M SPY++WQ+WRN  DADV  F K  T LP+ EI R+A L+G EINEAKK
Sbjct: 241 VGGAVWLNGDMCSPYDYWQFWRNTHDADVERFLKLFTDLPLDEIARLAALEGSEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+A E T + HG + AE+AA  A + F+       +P + +S   +S    L+  +V  G
Sbjct: 301 ILANEATKLAHGEKAAEEAAATAKKTFEEGAAGDALPVMKVSDSSIS----LVDALVGLG 356

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
              S  EARR ++    +IN     +EK  I++    +  NI++S GKK H +  
Sbjct: 357 LVASKAEARRMIRGGGARINGEKALDEKAVIEV----TAENIRISAGKKAHGVIQ 407


>gi|126739432|ref|ZP_01755125.1| tyrosyl-tRNA synthetase [Roseobacter sp. SK209-2-6]
 gi|126719532|gb|EBA16241.1| tyrosyl-tRNA synthetase [Roseobacter sp. SK209-2-6]
          Length = 418

 Score =  431 bits (1109), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 213/413 (51%), Positives = 279/413 (67%), Gaps = 3/413 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KSDF++++ ERGF+   ++ + LD    QGV  AYIG+D TA SLH G L Q+M+L W Q
Sbjct: 6   KSDFVAVMMERGFLADCTDYQGLDEALMQGVKPAYIGFDATAKSLHVGSLIQIMMLRWFQ 65

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD-A 123
           KTGH+PI+LMGGGT+ +GDPSFR + R ++    I  NI  IK +F+++I Y T   + A
Sbjct: 66  KTGHQPITLMGGGTTKVGDPSFRADERPLLDEAAINANIAGIKKVFAAYIDYDTDAPNKA 125

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           LMLNN  WL  + Y++ LR+IG  FSVNRMLSFESV+SRL REQSLSFLEFNYMILQAYD
Sbjct: 126 LMLNNAEWLDDLNYLEFLRDIGRHFSVNRMLSFESVKSRLDREQSLSFLEFNYMILQAYD 185

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+EL + Y C LQMGGSDQWGNI+ GIDL  R+    +F LTSPLLTT+ G KMGK+  G
Sbjct: 186 FLELNRRYGCILQMGGSDQWGNIVNGIDLTRRVLDNSIFGLTSPLLTTSDGKKMGKSQDG 245

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIA 303
           A+WLN +M SPY FWQ+WRN  DADV  F K  T LP+ E +R+  L G EIN+AK ++A
Sbjct: 246 AVWLNPDMRSPYEFWQFWRNTTDADVGRFLKLYTELPIDECERLGALAGSEINDAKIVLA 305

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
            E+T + HG E A  A   + E F+       +PT+S+S  ++  G+ ++ LIVK+G A 
Sbjct: 306 NEVTKLCHGAEAALAAEATSREVFEKGGVGDDLPTLSLSPADLGDGISIVQLIVKSGLAK 365

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           S  EA+R +  N  KI++  +++  L +      S   IKLS GKK H +  L
Sbjct: 366 SGKEAKRLISENGAKIDDQPLTDAGLMLDAGALSSP--IKLSAGKKRHALVQL 416


>gi|315499743|ref|YP_004088546.1| tyrosyl-tRNA synthetase [Asticcacaulis excentricus CB 48]
 gi|315417755|gb|ADU14395.1| tyrosyl-tRNA synthetase [Asticcacaulis excentricus CB 48]
          Length = 440

 Score =  429 bits (1103), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 210/414 (50%), Positives = 278/414 (67%), Gaps = 2/414 (0%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M +FKSDFL++LSERGFIHQ ++   LD L S G +T YIGYD TASSLHAGHL Q+MLL
Sbjct: 25  MTSFKSDFLNVLSERGFIHQCTDAEALDTLASAGPITGYIGYDATASSLHAGHLVQIMLL 84

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
           +WLQKTG+KPI LMGGGT+ +GDP+F+D  R ++  ++IQ N+  IK +F+SF+ +G G 
Sbjct: 85  YWLQKTGNKPIVLMGGGTTKVGDPTFKDTQRPLLTDEQIQSNMNGIKSVFNSFLTFGDGA 144

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           TDA+M+NN+ WL    YI+ LR  G+ F++NRML+F+SV+ RL+REQ ++FLEFNYM++Q
Sbjct: 145 TDAIMVNNDDWLSGFGYIEFLRTFGTHFTINRMLTFDSVKLRLEREQPMTFLEFNYMLMQ 204

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           A DF EL   Y+C LQMGGSDQWGNI+ G++L  RL     F LT+PLLTTASG KMGKT
Sbjct: 205 AVDFRELNSTYNCVLQMGGSDQWGNIVNGVELTRRLNQKAAFGLTTPLLTTASGAKMGKT 264

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           + GA+WLN +  SPY++WQYWRN +DADV  F +  T LPM EI R+  LQG EINEAKK
Sbjct: 265 VGGAVWLNADALSPYDYWQYWRNTEDADVGKFMRLFTDLPMDEIRRLEALQGAEINEAKK 324

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIH-SQHMPTISISKDEVSRGMGLLTLIVKA 359
           I+A   T MVHG   A  A   A + F+       ++  +   + +         L  KA
Sbjct: 325 ILADAATRMVHGEAAAATARDTAQKAFEQGTRLVSNVVEMDWQQGQEFTYRTPEALAAKA 384

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            F  S  +A+R + +N IKIN    + +KL  + +         L  GKK  ++
Sbjct: 385 -FNLSIKDAKRSIANNEIKINGEHPATDKLYKRSEVNAEDAAFVLQRGKKTVLV 437


>gi|84501152|ref|ZP_00999387.1| tyrosyl-tRNA synthetase [Oceanicola batsensis HTCC2597]
 gi|84391219|gb|EAQ03637.1| tyrosyl-tRNA synthetase [Oceanicola batsensis HTCC2597]
          Length = 417

 Score =  429 bits (1102), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 207/412 (50%), Positives = 285/412 (69%), Gaps = 2/412 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KS+F++ + ERGFI   ++ + LD   ++G+VTAYIGYD TA SLH GHL  +M+L WLQ
Sbjct: 6   KSEFMATIMERGFIADCTDYQALDEALNKGMVTAYIGYDATAKSLHVGHLMNIMMLRWLQ 65

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           KTGH+PI+LMGGGT+ +GDPSFR + R ++   +I ENI  ++ +F+ ++ Y      AL
Sbjct: 66  KTGHQPITLMGGGTTKVGDPSFRADERPLLSPAQIGENIAGMQRVFAQYLDYDREANPAL 125

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           ML+N  WL  + Y++ LR+IG  FSVNRMLSFESV+SRL REQSLSFLEFNYMILQAYDF
Sbjct: 126 MLDNAEWLDGLNYLEFLRDIGRHFSVNRMLSFESVKSRLDREQSLSFLEFNYMILQAYDF 185

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL + +DC LQMGGSDQWGNI+ GIDL  R+   +++ LT+PLLTT+ G KMGK+ +GA
Sbjct: 186 LELNRRHDCLLQMGGSDQWGNIVNGIDLTRRVLDTEIYGLTTPLLTTSDGRKMGKSANGA 245

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WL+ EM SPY FWQ+WRN  DADV  F K  + LP+ E DR+  L G EIN+AK I+A 
Sbjct: 246 VWLSGEMLSPYEFWQFWRNSTDADVGRFLKIFSELPVEECDRLGALGGSEINDAKVILAN 305

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E TT++HG + A  A   A E F+       +PT+ ++  EV  G+ ++ L+V+ G A +
Sbjct: 306 EATTLLHGADAARTAEATAREVFEKGGIGGDLPTLELTTGEVGGGISVVQLLVRTGLART 365

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             EA+R +  N  ++N++ +++  L   L D   +  +KLS GKK H +  L
Sbjct: 366 GKEAKRLIADNGARLNDAPLTDAGL--VLDDASLSAPVKLSAGKKRHALVKL 415


>gi|254474897|ref|ZP_05088283.1| tyrosyl-tRNA synthetase [Ruegeria sp. R11]
 gi|214029140|gb|EEB69975.1| tyrosyl-tRNA synthetase [Ruegeria sp. R11]
          Length = 418

 Score =  428 bits (1100), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 214/415 (51%), Positives = 284/415 (68%), Gaps = 3/415 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KSDF+S++ ERG++   ++ + LD        +AYIG+D TA+SLH G L Q+M+L W Q
Sbjct: 6   KSDFISVMMERGYLADCTDYQGLDEALMTPGQSAYIGFDATATSLHVGSLIQIMMLRWFQ 65

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG-KTDA 123
           KTGHKPI+LMGGGT+ +GDPSFR + R ++   +I  NI  IK +F+++I Y TG +  A
Sbjct: 66  KTGHKPITLMGGGTTKVGDPSFRADERPLLTDDQIDSNIAGIKKVFAAYIDYDTGAENSA 125

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           +MLNN  WL  + Y+  LR+IG  FSVNRMLSFESV+SRL REQSLSFLEFNYMILQAYD
Sbjct: 126 MMLNNAEWLDDLNYLTFLRDIGRHFSVNRMLSFESVKSRLDREQSLSFLEFNYMILQAYD 185

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+EL + Y C LQMGGSDQWGNI+ GIDL  R+   +++ LTSPLLTT+ G KMGK+ +G
Sbjct: 186 FLELNRRYGCVLQMGGSDQWGNIVNGIDLTRRVLDHEIYGLTSPLLTTSDGKKMGKSQNG 245

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIA 303
           AIWLN +M SPY FWQ+WRN  DADV  F K  T LP+ E +R+  L+G E+N AK I+A
Sbjct: 246 AIWLNSDMLSPYEFWQFWRNTTDADVGRFLKLYTELPVDECNRLGALEGSEVNAAKVILA 305

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
            E+T ++HGR  AE A   A E F+       +PT+S+S  ++  G+ ++ LIVK+G A 
Sbjct: 306 NEVTALLHGRAAAEAAEATAREVFEKGGVGDDLPTLSLSSADLGDGISIVQLIVKSGLAK 365

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLCG 418
           S  +A+R +  N  KI++  +++  L I      S   IKLS GKK H +  L G
Sbjct: 366 SGKDAKRLIAENGAKIDDKPLTDAGLMIDAAALASP--IKLSAGKKRHALVQLDG 418


>gi|163739624|ref|ZP_02147033.1| 50S ribosomal protein L32 [Phaeobacter gallaeciensis BS107]
 gi|161387083|gb|EDQ11443.1| 50S ribosomal protein L32 [Phaeobacter gallaeciensis BS107]
          Length = 418

 Score =  427 bits (1099), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 211/415 (50%), Positives = 284/415 (68%), Gaps = 3/415 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KSDF++++ ERG++   ++ + LD        +AYIG+D TA+SLH G L Q+M+L W Q
Sbjct: 6   KSDFIAVMMERGYLSDCTDYQGLDEALMTPGQSAYIGFDATATSLHVGSLIQIMMLRWFQ 65

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA- 123
           KTGHKPI+LMGGGT+ +GDPSFR + R ++   +I +NI  IK +F ++I Y +G  +A 
Sbjct: 66  KTGHKPITLMGGGTTKVGDPSFRADERPLLTDAQIDDNIAGIKKVFDAYIDYDSGAGNAA 125

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           +MLNN  WL  + Y+  LR+IG  FSVNRMLSFESV+SRL REQSLSFLEFNYMILQAYD
Sbjct: 126 MMLNNAEWLDDLNYLTFLRDIGRHFSVNRMLSFESVKSRLDREQSLSFLEFNYMILQAYD 185

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+EL + Y C LQMGGSDQWGNI+ GIDL  R+   +++ LTSPLLTT+ G KMGK+ +G
Sbjct: 186 FLELNRRYGCVLQMGGSDQWGNIVNGIDLTRRVLDHEIYGLTSPLLTTSDGKKMGKSQNG 245

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIA 303
           AIWLN ++ SPY FWQ+WRN  DADV  F K  T LP+ E +R+  L+G E+N AK I+A
Sbjct: 246 AIWLNGDLLSPYEFWQFWRNTTDADVGRFLKLYTELPVDECNRLGALEGSEVNAAKVILA 305

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
            E+TT++HG E A  A   A E F+       +PT+++S  +V  G+ ++ LIVK+G A 
Sbjct: 306 NEVTTLLHGAEAAAAAEATAREVFEKGGIGDDLPTLALSAADVGDGISIVQLIVKSGLAK 365

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLCG 418
           S  +A+R +  N  KI++  +++  L I      S   IKLS GKK H +  L G
Sbjct: 366 SGKDAKRLIAENGAKIDDQPLTDAGLMIDTAALASP--IKLSAGKKRHALVQLDG 418


>gi|163741390|ref|ZP_02148781.1| tyrosyl-tRNA synthetase [Phaeobacter gallaeciensis 2.10]
 gi|161385124|gb|EDQ09502.1| tyrosyl-tRNA synthetase [Phaeobacter gallaeciensis 2.10]
          Length = 418

 Score =  427 bits (1099), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 211/415 (50%), Positives = 284/415 (68%), Gaps = 3/415 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KSDF++++ ERG++   ++ + LD        +AYIG+D TA+SLH G L Q+M+L W Q
Sbjct: 6   KSDFIAVMMERGYLSDCTDYQGLDEALMTPGQSAYIGFDATATSLHVGSLIQIMMLRWFQ 65

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA- 123
           KTGHKPI+LMGGGT+ +GDPSFR + R ++   +I +NI  IK +F ++I Y +G  +A 
Sbjct: 66  KTGHKPITLMGGGTTKVGDPSFRADERPLLTDAQIDDNIAGIKKVFDAYIDYDSGAGNAA 125

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           +MLNN  WL  + Y+  LR+IG  FSVNRMLSFESV+SRL REQSLSFLEFNYMILQAYD
Sbjct: 126 MMLNNAEWLDDLNYLTFLRDIGRHFSVNRMLSFESVKSRLDREQSLSFLEFNYMILQAYD 185

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+EL + Y C LQMGGSDQWGNI+ GIDL  R+   +++ LTSPLLTT+ G KMGK+ +G
Sbjct: 186 FLELNRRYGCVLQMGGSDQWGNIVNGIDLTRRVLDHEIYGLTSPLLTTSDGKKMGKSQNG 245

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIA 303
           AIWLN ++ SPY FWQ+WRN  DADV  F K  T LP+ E +R+  L+G E+N AK I+A
Sbjct: 246 AIWLNGDLLSPYEFWQFWRNTTDADVGRFLKLYTELPVDECNRLGALEGSEVNAAKVILA 305

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
            E+TT++HG E A  A   A E F+       +PT+++S  +V  G+ ++ LIVK+G A 
Sbjct: 306 NEVTTLLHGAEAAAAAEATAREVFEKGGIGDDLPTLALSAADVGDGISIVQLIVKSGLAK 365

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLCG 418
           S  +A+R +  N  KI++  +++  L I      S   IKLS GKK H +  L G
Sbjct: 366 SGKDAKRLIAENGAKIDDKPLTDAGLMIDAAALASP--IKLSAGKKRHALVQLEG 418


>gi|310816533|ref|YP_003964497.1| tyrosyl-tRNA synthetase [Ketogulonicigenium vulgare Y25]
 gi|308755268|gb|ADO43197.1| tyrosyl-tRNA synthetase [Ketogulonicigenium vulgare Y25]
          Length = 416

 Score =  427 bits (1098), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 208/413 (50%), Positives = 277/413 (67%), Gaps = 2/413 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KS+FL+++ ERG+I   +N + LD      VV AYIGYD TA+SLH GHL  +M+L WLQ
Sbjct: 6   KSEFLAVMIERGYIADCTNYQALDAALMSQVVPAYIGYDATAASLHVGHLLNIMMLRWLQ 65

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           KTGH+PI+LMGGGT+ +GDPSFR + R ++   +I ENI  ++ +F+ F++Y      A 
Sbjct: 66  KTGHQPITLMGGGTTKVGDPSFRSDERPLLTPAKIDENIAGMQQVFARFLRYDDSANGAK 125

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           MLNN  WL S+ Y++ LR+IG  FSVNRMLSFESV+SRL REQSLSFLEFNYMILQAYDF
Sbjct: 126 MLNNAEWLDSLNYLEFLRDIGRHFSVNRMLSFESVKSRLDREQSLSFLEFNYMILQAYDF 185

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL + Y   LQMGGSDQWGNI+ GIDL  R+   +++ LTSPLLTT+ G KMGK+ +GA
Sbjct: 186 LELNRRYGTLLQMGGSDQWGNIVNGIDLTRRVIDKEIYGLTSPLLTTSDGKKMGKSANGA 245

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           IWL  +M SPY FWQ+WRN  DADV  F K  T LP++E DR+  L G EIN AK I+A 
Sbjct: 246 IWLRGDMLSPYEFWQFWRNSTDADVARFLKLYTELPVAECDRLGNLGGSEINAAKIILAN 305

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E+TT++HG E A  A   A E F+       +P +++S DEV  G+ L  L+V++G A +
Sbjct: 306 EVTTLLHGAEAAAAAEATAREVFENGGVGDDLPQLALSVDEVGDGISLAQLVVRSGLAKT 365

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
             + +R +    +K+N+    +        D +    +KLS GKK H +  + 
Sbjct: 366 GKDGKRLIAEGGLKVNDETTVDAGRLFTAADLEVP--VKLSAGKKRHALVSIS 416


>gi|56697334|ref|YP_167700.1| tyrosyl-tRNA synthetase [Ruegeria pomeroyi DSS-3]
 gi|81349511|sp|Q5LQK5|SYY_SILPO RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|56679071|gb|AAV95737.1| tyrosyl-tRNA synthetase [Ruegeria pomeroyi DSS-3]
          Length = 415

 Score =  426 bits (1095), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 210/413 (50%), Positives = 281/413 (68%), Gaps = 5/413 (1%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KSDF++++ ERGF+   ++ + LD    +G    YIG+D TA SLH G L Q+M+L WLQ
Sbjct: 6   KSDFIAVMMERGFLADCTDYQGLDEALMKGCQPGYIGFDATAKSLHVGSLIQIMMLRWLQ 65

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA- 123
           KTGHKPI+LMGGGT+ +GDPSFR + R ++   +I +NI  I+ +F+++I Y +G  +A 
Sbjct: 66  KTGHKPITLMGGGTTKVGDPSFRADERPLLTPAQIDDNIAGIRKVFAAYIDYDSGAENAA 125

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           LMLNNE WL  + Y+D LR+IG  FSVNRMLSFESV+SRL REQSLSFLEFNYMILQAYD
Sbjct: 126 LMLNNEEWLDDLNYLDFLRDIGRHFSVNRMLSFESVKSRLDREQSLSFLEFNYMILQAYD 185

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+EL + Y C LQMGGSDQWGNI+ GIDL  R+   +++ LTSPLLTT+ G KMGK+  G
Sbjct: 186 FMELNRRYGCILQMGGSDQWGNIVNGIDLTRRVIDHEVYGLTSPLLTTSDGKKMGKSQDG 245

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIA 303
           A+WLN +M SPY FWQ+WRN  DADV  F K  T LP+ E DR+  L G EIN AK I+A
Sbjct: 246 AVWLNPDMRSPYEFWQFWRNTTDADVGRFLKLYTELPVGECDRLGALAGSEINAAKVILA 305

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
            E+T + HG E A  A   A E F+       +PT+++   ++     ++ LIVK G A 
Sbjct: 306 NEVTALCHGAEAAATAEATAREVFEKGGIGDDLPTLTLGAADLP--ASIVQLIVKTGLAK 363

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           S  EA+R +  +  ++N++ +++  + I+  D  +   IKLS GKK H +  L
Sbjct: 364 SGKEAKRLIAEDGARLNDAPLTDAGMMIEAGDLAAP--IKLSAGKKRHALVQL 414


>gi|297717908|gb|ADI50097.1| hypothetical protein [Candidatus Odyssella thessalonicensis L13]
          Length = 417

 Score =  425 bits (1092), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 201/414 (48%), Positives = 277/414 (66%), Gaps = 2/414 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KS+FL IL  RGFIHQ ++   LD L +   +TAYIG+D TA+SLH G L Q+M+L WLQ
Sbjct: 2   KSEFLQILKSRGFIHQATDMEALDNLANSQSITAYIGFDATANSLHVGSLVQIMMLRWLQ 61

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           K GH+P+ LMGGGTS+IGDP+ RD++R ++    IQ NI  I  +F  F+ + +G   AL
Sbjct: 62  KCGHRPLVLMGGGTSMIGDPTGRDDARNLLMDDAIQHNIAGISRVFKKFLNFSSGANAAL 121

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           MLNN  WL  I YI  LR+ G  FSVNRML+F+SV+ RL+REQ LSFLEFNYMILQAYDF
Sbjct: 122 MLNNADWLGEINYIGFLRDFGRHFSVNRMLTFDSVKLRLEREQPLSFLEFNYMILQAYDF 181

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL + Y C LQMGGSDQWGNI+ G++L  R+   +++ LTSPL+T +SG KMGKT +GA
Sbjct: 182 LELNRRYGCVLQMGGSDQWGNIVNGVELTRRVIGKEVYGLTSPLITNSSGAKMGKTANGA 241

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WLN +    Y++WQ+WRN +DADV  + +  T L +SEI+++ +LQG EIN AKK++A 
Sbjct: 242 VWLNADRLPAYDYWQFWRNTEDADVGRYLRLFTELELSEIEKLEQLQGSEINHAKKVLAD 301

Query: 305 EITTMVHGREEAEKAATAAMECFDM--SIHSQHMPTISISKDEVSRGMGLLTLIVKAGFA 362
             TT+ HG E   +      + F+   S     +P I IS+ E   G+ +L + V+   A
Sbjct: 302 AATTLAHGAEVLPQIHATITQLFEQGNSGDLSSLPAIEISQAEFENGLPILEVFVQLNLA 361

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            S  EARR ++ N  KIN++ +++  L +     ++ G +KLS GKK H +  +
Sbjct: 362 ASKGEARRLIQGNGAKINDAALTDPNLTVTSSHLNADGMVKLSAGKKRHGVVKI 415


>gi|296284067|ref|ZP_06862065.1| tyrosyl-tRNA synthetase [Citromicrobium bathyomarinum JL354]
          Length = 407

 Score =  424 bits (1091), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 201/414 (48%), Positives = 279/414 (67%), Gaps = 9/414 (2%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           MP ++S+ L++L +R + HQI++   LD+L S+ +V  Y+G+D TASSLH G L Q+MLL
Sbjct: 1   MPTYRSELLNVLDQRHYTHQITDAERLDLLASEQIVPGYVGFDPTASSLHVGSLVQIMLL 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             LQ+TGHKPI +MGGGT  IGDPS RDESR++M  + I  NI  I+ +F   + +G G 
Sbjct: 61  RRLQQTGHKPIVVMGGGTGKIGDPSGRDESRQLMTEEVIAANIASIRKVFERILTFGDGP 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           TDA+M+NN+ WL  + Y+DLLR++G  F+VNRML+F+SV+ RL REQ L+FLEFNYMILQ
Sbjct: 121 TDAVMVNNDEWLSGLGYLDLLRDVGPHFTVNRMLTFDSVKMRLDREQPLTFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDF ELA+ Y CRLQMGGSDQWGNI+ GI+L  R    +LF  T+PLLTTA G KMGKT
Sbjct: 181 AYDFRELAERYGCRLQMGGSDQWGNIVNGIELTRRTGGGELFGFTTPLLTTADGKKMGKT 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
            SGA+WLN++M   Y+FWQ+WRN DD DV  F +  T +P+ EI+R+ +L+G EIN+AK 
Sbjct: 241 ASGAVWLNEDMLPAYDFWQFWRNTDDRDVGRFLRLFTDIPLDEIERLERLEGAEINDAKV 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
            +A  +T +V G + A  A   A E F        +PT+S+       GMGL   +   G
Sbjct: 301 ALANAVTALVRGEDAAAAAEATARETFAGGAGGD-LPTLSVGD-----GMGLPAALSALG 354

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           F  S  EA+R +   A+++++ ++S+  + + +   +     +LS G+K H I 
Sbjct: 355 FTASNKEAKRKIAEGAVRLDDEVLSDSAMVLTVAQGEQR---RLSLGRKKHAIL 405


>gi|225631309|ref|ZP_03787984.1| tyrosyl-tRNA synthetase [Wolbachia endosymbiont of Muscidifurax
           uniraptor]
 gi|225590984|gb|EEH12191.1| tyrosyl-tRNA synthetase [Wolbachia endosymbiont of Muscidifurax
           uniraptor]
          Length = 383

 Score =  423 bits (1087), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 197/380 (51%), Positives = 275/380 (72%), Gaps = 2/380 (0%)

Query: 6   SDFLSILSERGFIHQISNPRELD-ILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           S+FL+ + ERG+++Q +N   LD +L     + AYIG+D TA SLHAGHL Q+M+L  LQ
Sbjct: 5   SEFLNFIQERGYLYQCTNIEGLDQLLLQSNYIVAYIGFDCTAPSLHAGHLIQIMMLCHLQ 64

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           K G+KPI L+GGGT+ IGDPSF+D++R ++  + I +N   I+ I    + +   KT A+
Sbjct: 65  KFGYKPIVLLGGGTTKIGDPSFKDKARSILPVENINQNTSSIRRILEKMVSFNDSKTGAM 124

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           ++NN  WL +IK ID LR+IG++FSVNRMLSF+SV++RL REQ+LSFLEFNYM+LQAYDF
Sbjct: 125 IVNNADWLDNIKCIDFLRDIGAYFSVNRMLSFDSVKTRLDREQTLSFLEFNYMLLQAYDF 184

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL K YDCRLQ+GGSDQWGNI+ GI+LG++L  P+LF LT PLL  A G KMGKT SGA
Sbjct: 185 IELNKKYDCRLQIGGSDQWGNIVNGIELGKKLNLPELFGLTMPLLLNAQGKKMGKTESGA 244

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WL+  M  PY++WQY+RN+DD DV  F + LT +P+ EI ++  L+ +EINEAKK++AT
Sbjct: 245 VWLDDNMLKPYDYWQYFRNVDDQDVGRFLRLLTDVPIDEIRKLESLKDQEINEAKKVLAT 304

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E+T + HG +EAE A  AA+  F+    S  +P   I K++V+ G+ L+ L+   GF  S
Sbjct: 305 EVTKICHGDKEAELAQFAAISAFENE-DSSLLPDYIIKKEQVASGISLVDLLHDTGFEPS 363

Query: 365 TNEARRHLKSNAIKINNSII 384
              A+R ++ N  KIN++++
Sbjct: 364 KGAAKRLIQGNGCKINDNVV 383


>gi|294084595|ref|YP_003551353.1| Tyrosyl-tRNA synthetase, class Ib [Candidatus Puniceispirillum
           marinum IMCC1322]
 gi|292664168|gb|ADE39269.1| Tyrosyl-tRNA synthetase, class Ib [Candidatus Puniceispirillum
           marinum IMCC1322]
          Length = 414

 Score =  422 bits (1085), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 199/410 (48%), Positives = 273/410 (66%), Gaps = 2/410 (0%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           +KSD +   ++RG+IHQ +N   LD   S  V+ AYIG+D TA SLH G L Q+M+L  L
Sbjct: 3   YKSDLIQHYTDRGYIHQATNIEALDDAASTKVLPAYIGFDCTADSLHVGSLVQIMMLRIL 62

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           QKTGHKPI LMGGGT+ +GDPS +D +R ++  Q+I+ N   IK +F  ++K+G G TDA
Sbjct: 63  QKTGHKPIVLMGGGTTKVGDPSGKDTARPLLSDQDIEANKNGIKKVFEKYLKFGDGPTDA 122

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           +M++N  WL ++ YI  LR+ G  FS+NRM+  +SV+ RL REQ LSFLEFNY ILQAYD
Sbjct: 123 IMVDNADWLDTLGYIRFLRDFGPHFSINRMMGMDSVKLRLDREQPLSFLEFNYAILQAYD 182

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+EL + Y C LQMGGSDQWGNI+ GIDL  R+   ++F LTSPL+TTASG KMGK+  G
Sbjct: 183 FLELRRRYGCLLQMGGSDQWGNIVTGIDLTRRVDAQEIFGLTSPLITTASGAKMGKSADG 242

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIA 303
           A+WLN +  S ++FWQ+WRN +DADV  F    T LPM E++R+  L+G +INEAK I+A
Sbjct: 243 AVWLNDDKLSAFDFWQFWRNTEDADVARFLALFTELPMDEVNRLGALEGADINEAKIILA 302

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
            E T++ HG E A  A   A + F  S  S  +P   ++    +  + ++  +   GFA 
Sbjct: 303 NEATSLCHGTEAAAHAMQTAQQTFAGSGVSDGLPQFDLAAGR-AEALDMVEALKIVGFAA 361

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
           S  EARR ++    ++N+  I++E +Q+ L DF   G  K+S GKK H +
Sbjct: 362 SNGEARRLIRGGGARVNDVAINDENMQLTLSDF-IDGKAKISAGKKRHAM 410


>gi|116252758|ref|YP_768596.1| tyrosyl-tRNA synthetase [Rhizobium leguminosarum bv. viciae 3841]
 gi|115257406|emb|CAK08501.1| putative tyrosyl-tRNA synthetase [Rhizobium leguminosarum bv.
           viciae 3841]
          Length = 421

 Score =  422 bits (1085), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 209/412 (50%), Positives = 280/412 (67%), Gaps = 4/412 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           +SDFL  LSERGF+HQ ++   LD     G  TAY G+DLTA SLH GHL  +M+L W Q
Sbjct: 11  RSDFLRTLSERGFLHQCTDLGALDSWLCSGAGTAYNGFDLTADSLHVGHLIPIMMLRWFQ 70

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           KTG+KPI+L+GG TS +GDPSFRD SR  +  ++I +N+  I+ +F  F+ +G G TDA+
Sbjct: 71  KTGNKPIALLGGATSRLGDPSFRDTSRPFLSEEQIMKNLIGIRRVFERFLAFGDGPTDAV 130

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M+NN  WL  + Y+D LR+IG  FSVNRML+ ESVR RL+REQSLS LEFNYM++QAYDF
Sbjct: 131 MVNNADWLGGLNYLDFLRDIGPHFSVNRMLTSESVRQRLEREQSLSLLEFNYMVMQAYDF 190

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             LA++  C LQ+GGSDQWGNI+ G++ G R+    LF LT+PLLTT+SG KMGK++SGA
Sbjct: 191 HVLAESRGCLLQLGGSDQWGNIVSGVEFGRRIGGRTLFGLTAPLLTTSSGAKMGKSVSGA 250

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WLN +  SPY FWQ+WRN  DADV  F +  T LP+ EI R+  L+  EINEAKKI+A 
Sbjct: 251 VWLNADRLSPYEFWQFWRNTGDADVGRFLRLFTELPLDEIARLEVLRDSEINEAKKILAD 310

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           +IT + HG + A +A+  +   F+       +PT+ +  D +     L+  +V AG A S
Sbjct: 311 QITRLCHGADAAVQASETSRRIFEAGEVPAGLPTVRL-PDSLRGDFPLVDAMVVAGLAKS 369

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFD-STGNIKLSFGKKNHIICH 415
            +EARR +    +++N   +S+E +Q  L DFD   G I+LS GKK HI+  
Sbjct: 370 KSEARRLIGGGGVRVNGGSVSDEAMQ--LGDFDVQDGVIRLSVGKKRHILLQ 419


>gi|326387950|ref|ZP_08209556.1| tyrosyl-tRNA synthetase [Novosphingobium nitrogenifigens DSM 19370]
 gi|326207996|gb|EGD58807.1| tyrosyl-tRNA synthetase [Novosphingobium nitrogenifigens DSM 19370]
          Length = 409

 Score =  422 bits (1085), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 209/417 (50%), Positives = 280/417 (67%), Gaps = 8/417 (1%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  +KSD L +L+ERG IHQ+++   LD L  +G+V AY GYD TA SLH G+L  +MLL
Sbjct: 1   MSEYKSDLLRLLAERGHIHQLTDAEGLDKLACEGIVVAYNGYDATAPSLHIGNLASVMLL 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             LQ+ GHKPI+LMGGGT+ +GDPS +DESR+++    I  NI  I  +F   + +    
Sbjct: 61  RRLQQAGHKPIALMGGGTTKVGDPSGKDESRKLLTQDAIASNIAGISQVFHRLLDFSDSP 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           T A+M+NN+ WL ++ YIDLLR +G  F+VNRML+F+SV+ RL+REQ L+FLEFNYMILQ
Sbjct: 121 TGAVMVNNDEWLSTLGYIDLLRTVGPHFTVNRMLTFDSVKLRLEREQPLTFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDF ELA  + CRLQ+GGSDQWGNI+ GI+L  R+   +LF LT+PLLTTA G KMGK+
Sbjct: 181 AYDFRELALRHGCRLQLGGSDQWGNIVNGIELTRRMNGIELFGLTTPLLTTADGAKMGKS 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           ++GA+WLN+EM   Y+FWQYWRN+DD DVV F K  T LP+ EI R+  LQG EIN AK 
Sbjct: 241 VNGAVWLNEEMLPSYDFWQYWRNVDDRDVVRFLKLFTDLPLDEIARLEALQGSEINAAKV 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           ++A E+T +V G E A  A T A   F      Q +PT  +  D    G+G++  ++  G
Sbjct: 301 VLANEVTRLVRGEEAARAAETTAAATFAGGGLGQDLPTFEVGPD----GIGIIDALIGLG 356

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           FA S  EA+R +     +++ + I++E   I L    ++G  KLS GKK H I  + 
Sbjct: 357 FAASRGEAKRLIAGGGARLDGTAITDEAYHITL----ASGEAKLSSGKKKHGILRIA 409


>gi|260576399|ref|ZP_05844390.1| tyrosyl-tRNA synthetase [Rhodobacter sp. SW2]
 gi|259021470|gb|EEW24775.1| tyrosyl-tRNA synthetase [Rhodobacter sp. SW2]
          Length = 416

 Score =  422 bits (1084), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 197/410 (48%), Positives = 275/410 (67%), Gaps = 2/410 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KSDFL ++  RGF+   ++ +  D    +GVV  YIG+D TA SLH G L Q+M+L WLQ
Sbjct: 6   KSDFLHVMMSRGFLADCTDYQGFDDALVKGVVPGYIGFDATAKSLHVGSLIQIMMLRWLQ 65

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           KTGHKPI LMGGGT+ +GDPSFR + R ++   +I ENI  I+ +F++++ +G G  DAL
Sbjct: 66  KTGHKPIVLMGGGTTKVGDPSFRADERPLLSPAQIDENIAGIRAVFANYVTFGNGPQDAL 125

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M+NN  WL ++ Y+D LR+IG  FS+NRML+FESV+SRL REQSLSFLEFNYMILQAYDF
Sbjct: 126 MVNNAEWLDALNYLDFLRDIGRHFSINRMLAFESVKSRLDREQSLSFLEFNYMILQAYDF 185

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL + Y C +QMGGSDQWGNI+ GIDL  R+   +++ LTSPLLTT+ G KMGK+ SGA
Sbjct: 186 LELNRRYGCLVQMGGSDQWGNIVNGIDLTRRVLDTQIYGLTSPLLTTSDGKKMGKSQSGA 245

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WLN +M SPY FWQ+WRN  DADV  F K  T LP+ E +R+  L G EIN AK ++A 
Sbjct: 246 VWLNADMLSPYEFWQFWRNTTDADVGRFLKLYTELPLEECERLGALAGSEINAAKIVLAN 305

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
            +TT+ HG E    A   A E F+       +PT+ ++ +++  G+ +  L V++G A S
Sbjct: 306 AVTTLCHGAEATLAAEATAREVFEKGGVGDDLPTLLLNAEDMGDGISVAQLFVRSGLAKS 365

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
             +A+R +     ++N+ ++ +  + +          +KL+ G+K H + 
Sbjct: 366 GKDAKRLIAEGGARLNDELVLDPGMVLHASALAEP--VKLTAGRKRHALV 413


>gi|58584506|ref|YP_198079.1| tyrosyl-tRNA synthetase [Wolbachia endosymbiont strain TRS of
           Brugia malayi]
 gi|75497988|sp|Q5GT37|SYY_WOLTR RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|58418822|gb|AAW70837.1| Tyrosyl-tRNA synthetase [Wolbachia endosymbiont strain TRS of
           Brugia malayi]
          Length = 416

 Score =  421 bits (1081), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 205/409 (50%), Positives = 283/409 (69%), Gaps = 2/409 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELD-ILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           KS+FL+ + ERG++ Q +N   LD +L     V AYIG+D TASSLH G L Q+M+L  L
Sbjct: 4   KSEFLNFIQERGYLCQCTNIEGLDQLLLQNNYVVAYIGFDCTASSLHVGSLIQIMMLRHL 63

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           QK G+KPI L+GG T+ IGDPS +D++R ++  ++I +NI  IK      + +  GK  A
Sbjct: 64  QKFGYKPIVLLGGSTTKIGDPSGKDKARSVLPIEDINQNISGIKKALKKMVYFNDGKAGA 123

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           +++NN  WL SIKYID LR+IG+ FSVNRMLSF+S ++RL REQ+LSFLEFNYM+LQAYD
Sbjct: 124 IIVNNADWLDSIKYIDFLRDIGAHFSVNRMLSFDSAKTRLDREQNLSFLEFNYMLLQAYD 183

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F EL K Y CRLQ+GGSDQWGNI+ GI+LG++L  P+LF LT+PLL +A G KMGKT SG
Sbjct: 184 FAELNKKYGCRLQIGGSDQWGNIVNGIELGKKLNLPELFGLTTPLLLSAQGKKMGKTESG 243

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIA 303
            +WL+ +M  PY++WQY+RNIDD D+  F +  T LP+ EI ++  L+ +EINEAKK +A
Sbjct: 244 TVWLDGDMLKPYDYWQYFRNIDDQDIGRFLRFFTDLPIDEIKKLESLKNQEINEAKKALA 303

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
           TE+T + HG +EAE A ++A+  F+    S  +P  +I+K +V+ G+ L+ L+   G   
Sbjct: 304 TEVTKICHGDKEAELAQSSAVSVFENG-DSSLLPDYTITKKQVANGISLIDLLHDIGLEP 362

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           S   A+R ++ N  K+N+  I++    I  + F     IKLS GKK HI
Sbjct: 363 SKGAAKRLIQGNGCKVNDYTINDINYIINSKSFKDQSFIKLSAGKKRHI 411


>gi|288957327|ref|YP_003447668.1| tyrosyl-tRNA synthetase [Azospirillum sp. B510]
 gi|288909635|dbj|BAI71124.1| tyrosyl-tRNA synthetase [Azospirillum sp. B510]
          Length = 420

 Score =  420 bits (1080), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 205/417 (49%), Positives = 283/417 (67%), Gaps = 13/417 (3%)

Query: 6   SDFLSILSERGFIHQISNPRE----LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
           +DFL IL ERGF+HQ S+P +    L      GV+TAY+G+D TASSLH GHL  +M L 
Sbjct: 13  ADFLRILRERGFLHQCSDPADDLSGLAAAAPGGVLTAYVGFDATASSLHVGHLLSIMALR 72

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKT 121
           WLQ+TG++PI L+GGGT+ IGDPSFRD +R M+   +I  N   ++G+F  ++ +G G  
Sbjct: 73  WLQRTGNRPIVLIGGGTTRIGDPSFRDTTRPMLDDAQIAANAAGLRGVFGQYMSFGDGPA 132

Query: 122 DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA 181
           DA+M++N  WL  + Y+  LR+IG  F++NRMLSFESVR R++REQ L+FLEFNYMILQA
Sbjct: 133 DAMMVDNADWLDGLDYVPFLRDIGRHFTINRMLSFESVRQRMEREQPLTFLEFNYMILQA 192

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
           YDF+EL++ + C LQMGGSDQWGNI+ GI+L  R++  +LF LT+PLLTTASGTKMGKT 
Sbjct: 193 YDFLELSRRHGCLLQMGGSDQWGNIVNGIELARRVERRELFGLTTPLLTTASGTKMGKTA 252

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKI 301
            GA+WLN +   P++FWQ+WRN +DADV  F +  T LP+ EI R+ +L+G EINEAK I
Sbjct: 253 GGAVWLNADALRPFDFWQFWRNTEDADVGRFLRLFTELPLDEIARLERLEGAEINEAKII 312

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGF 361
           +ATE T + HG  EAEKAA AA   F  +     +P I++ ++  + G+ L+  +V AG 
Sbjct: 313 LATEATRLCHGSAEAEKAAAAAGSPF--APGGDGLPEITLRREAGADGVPLVDALVAAGL 370

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLCG 418
           + S   ARR ++    +++   +S+E   +       T    LS G+K H+   + G
Sbjct: 371 SASKGAARRLIREGGARLDGQPVSDEAATL-------TAPAVLSAGRKRHVRLIVAG 420


>gi|103487134|ref|YP_616695.1| tyrosyl-tRNA synthetase [Sphingopyxis alaskensis RB2256]
 gi|98977211|gb|ABF53362.1| tyrosyl-tRNA synthetase [Sphingopyxis alaskensis RB2256]
          Length = 422

 Score =  420 bits (1080), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 201/411 (48%), Positives = 280/411 (68%), Gaps = 8/411 (1%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  ++SD L +L ERG+IHQ+++   LD L ++ +V  YIG+D TA SLH G L Q+M+L
Sbjct: 15  MTNYQSDLLRLLDERGYIHQMTDAEGLDALAAKQIVPGYIGFDATAPSLHVGSLVQIMML 74

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             LQ+TGHKPI LMGGGT+ IGDP+ RDESR+M+  + I  NI  I  IF  F+ +G G 
Sbjct: 75  RRLQQTGHKPIVLMGGGTTRIGDPTGRDESRKMLSDEVIAANIASIFSIFRQFLVFGDGP 134

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           TDA+M++N+ WL  + YI+LL+E+G  F++NRML+F+SV+ RL+REQ ++FLEFNYMILQ
Sbjct: 135 TDAVMVDNQDWLGKLGYIELLQEVGRHFTINRMLTFDSVKLRLEREQPMTFLEFNYMILQ 194

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
            YDF  L++    RLQMGGSDQWGNI+ G++LG R+    L+ LT+PLLTTA+G KMGKT
Sbjct: 195 GYDFRHLSREMGVRLQMGGSDQWGNIVNGMELGRRMDGADLYGLTTPLLTTAAGAKMGKT 254

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
            +GA+WLN E  S +++WQYWRN DD DV  F K  T LP++EI R+  L+G EINEAKK
Sbjct: 255 AAGAVWLNPEQLSHFDYWQYWRNCDDRDVGKFLKLFTDLPLAEIARLEALEGAEINEAKK 314

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+A E T M  G + A  AA  A + F+       +P ++   D    G+G++  + + G
Sbjct: 315 ILANEATAMCRGVDAASTAAETATQTFEKGRIGGDLPHVAAPAD----GIGIVDALRELG 370

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           FA S  EARR L+  A++++ S++ +   +I      + G+I +S G K H
Sbjct: 371 FAASNKEARRKLEEGAVRVDGSVVRDPSYRI----VPAGGDIAISLGAKKH 417


>gi|114328610|ref|YP_745768.1| tyrosyl-tRNA synthetase [Granulibacter bethesdensis CGDNIH1]
 gi|114316784|gb|ABI62844.1| tyrosyl-tRNA synthetase [Granulibacter bethesdensis CGDNIH1]
          Length = 431

 Score =  419 bits (1078), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 202/407 (49%), Positives = 278/407 (68%), Gaps = 1/407 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           +S FL     RGF+ Q ++   LD   S G V+AY G+D TA SLH GH+ Q+MLL  LQ
Sbjct: 20  RSAFLREAEARGFLFQCTDQEALDNALSNGTVSAYTGFDCTADSLHVGHMMQIMLLRLLQ 79

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + GH+P+ L+GGGT+ IGDPSFR+E+R+++   +I  N++ I+     F+ +GTG TDA 
Sbjct: 80  RHGHRPVVLLGGGTTRIGDPSFREEARQLLTDAQIAANMDGIRANIEPFLTFGTGPTDAT 139

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           ++NN  WL ++ YI++LRE+G  FS+NRMLSF+SVR+RL+REQ L+FLEFNY ILQ+YDF
Sbjct: 140 LVNNADWLDTLGYIEILREVGVHFSINRMLSFDSVRTRLEREQGLTFLEFNYSILQSYDF 199

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
            EL +     LQ GGSDQW NII G+DL  R    ++F  T+PL+TTASG KMGKT  GA
Sbjct: 200 RELNRRLGVTLQFGGSDQWSNIISGVDLVRRTDGKQVFGFTAPLVTTASGAKMGKTAKGA 259

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WL  E  SPY++WQ+WRN +DADV  F +  T LP+ EI R+A LQG EINEAKKI+AT
Sbjct: 260 VWLTAEKLSPYDYWQFWRNTEDADVGRFLRLFTELPLDEIGRLAALQGAEINEAKKILAT 319

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E T ++HGRE AE AA  A   F+    +  +P+++I+  E++ G+ +L  +  AG A S
Sbjct: 320 EATGILHGRESAEAAAETARRAFEQGEAADTLPSVAIAASELAEGLPILRALTVAGLAQS 379

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
             EARR ++    ++NN  +++E L++   D    G IKLS G+K H
Sbjct: 380 NGEARRLIRGGGARVNNEAVTDEMLKLSPADLQD-GAIKLSAGRKQH 425


>gi|190571260|ref|YP_001975618.1| tyrosyl-tRNA synthetase [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
 gi|254765188|sp|B3CM50|SYY_WOLPP RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|190357532|emb|CAQ54969.1| tyrosyl-tRNA synthetase [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
          Length = 420

 Score =  419 bits (1077), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 205/409 (50%), Positives = 285/409 (69%), Gaps = 2/409 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQ-GVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           KS+FL+ + ERG+++Q +N   LD L SQ   + AYIG+D TA SLH G L Q+M+L  L
Sbjct: 4   KSEFLNFIQERGYLYQCTNIDRLDQLLSQDNYIIAYIGFDCTAPSLHIGSLIQIMMLRHL 63

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           QK G+KPI L+GGGT+ IGDPS +D++R ++  ++I +NI  IK      I +  GKT A
Sbjct: 64  QKFGYKPIVLLGGGTTKIGDPSGKDKARSVLPIEDINQNILGIKKTLEKMISFDYGKTGA 123

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           +++NN  WL +IKYID LR+IG+ FSVNRML F+SV+ RL REQ+LSFLEFNYM+LQAYD
Sbjct: 124 IIVNNADWLDNIKYIDFLRDIGTHFSVNRMLGFDSVKIRLDREQNLSFLEFNYMLLQAYD 183

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           FVEL K Y CR Q+GGSDQWGNI+ GI+L ++L  P+LF LT+PLL  A G KMGKT SG
Sbjct: 184 FVELNKKYGCRFQIGGSDQWGNIVNGIELSKKLNLPELFGLTTPLLLNAQGKKMGKTESG 243

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIA 303
           A+WL+  M + Y++WQY+RN+DD DV  F +  T LP+ EI ++  L+ +E NEAKK++A
Sbjct: 244 AVWLDGSMLNSYDYWQYFRNVDDQDVGRFLRLFTDLPIDEIKKLESLKDQETNEAKKVLA 303

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
           TE+T + HG +EAE A +AA+  F+    S  +   +I+K++++ G+ L+ L+   GF  
Sbjct: 304 TEVTKICHGCKEAELARSAAISAFENE-DSSLLSGYTITKEQIANGIPLIDLLYDTGFEP 362

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           S   A+R ++ N  K+N++ I++    I  + F     IKLS GKK HI
Sbjct: 363 SKGAAKRLIQGNGCKVNDNTINDVNYTINSESFKGQPFIKLSAGKKRHI 411


>gi|148259739|ref|YP_001233866.1| tyrosyl-tRNA synthetase [Acidiphilium cryptum JF-5]
 gi|326403294|ref|YP_004283375.1| tyrosyl-tRNA synthetase [Acidiphilium multivorum AIU301]
 gi|146401420|gb|ABQ29947.1| tyrosyl-tRNA synthetase [Acidiphilium cryptum JF-5]
 gi|325050155|dbj|BAJ80493.1| tyrosyl-tRNA synthetase [Acidiphilium multivorum AIU301]
          Length = 417

 Score =  419 bits (1076), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 205/406 (50%), Positives = 279/406 (68%), Gaps = 1/406 (0%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
            DFL     RG+I Q ++   L      G +  YIG+D TA SLH GH+ Q+M+L  LQK
Sbjct: 7   GDFLHEAEARGYIFQCTDTEGLREAMRAGPIAGYIGFDCTADSLHVGHMIQIMMLRLLQK 66

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++++GGGT+ IGDPSFR+E+R+++  ++I  N+  I+   ++++++G G +DA+M
Sbjct: 67  HGHKPVAILGGGTTRIGDPSFREEARQLLTEEQIALNMAGIRDNIAAYLRFGEGPSDAIM 126

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  WL ++ YIDLLRE+G  FSVNRMLSF+SVRSRL+REQ L+FLEFNY ILQAYDF 
Sbjct: 127 VNNADWLDTLGYIDLLREVGVHFSVNRMLSFDSVRSRLEREQGLTFLEFNYSILQAYDFR 186

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           EL + Y   LQMGGSDQWGNI+ GIDL  R    +++ LT+PL+TTASG KMGKT +GA+
Sbjct: 187 ELNRRYGVVLQMGGSDQWGNIVQGIDLVRRTDGKQVYGLTAPLITTASGAKMGKTAAGAV 246

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
           WL+    SP+++WQ+WRN +DADV  F +  T LP+ EI R+  LQG EINEAKKI+ATE
Sbjct: 247 WLSAARRSPFDYWQFWRNTEDADVGRFLRLFTDLPLDEIARLEALQGAEINEAKKILATE 306

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
            T + HGR  AE+AA  A   F+    ++ +P I I   E+  G+    L+VKAG A S 
Sbjct: 307 ATALCHGRAVAEEAAETARRTFEGGEAAETLPGIDIPAAELEAGIPAFALLVKAGLAASN 366

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
            EARR ++    ++N++ I++E   I L D    G  KLS GKK+H
Sbjct: 367 GEARRLIRGGGARLNDAPIADEAHTITLADV-IDGAAKLSAGKKHH 411


>gi|332184979|ref|ZP_08386728.1| tyrosyl-tRNA synthetase [Sphingomonas sp. S17]
 gi|332014703|gb|EGI56759.1| tyrosyl-tRNA synthetase [Sphingomonas sp. S17]
          Length = 408

 Score =  415 bits (1067), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 202/408 (49%), Positives = 280/408 (68%), Gaps = 8/408 (1%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           ++SD L  L++RG++HQ+++   LD L S  VV  YIG+D TA SLH G L Q+MLL  +
Sbjct: 3   YQSDLLRTLNDRGYVHQMTDAAALDRLASTQVVPGYIGFDPTAPSLHVGSLVQIMLLRRM 62

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q+TGHKPI LMGGGT  IGDPSF+DE+R+++    I+ N+  I+ IF  F+ +G G TDA
Sbjct: 63  QQTGHKPIVLMGGGTGKIGDPSFKDEARKLLAEDGIKANVASIQRIFERFLTFGDGPTDA 122

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           +M++N  WL  ++YI  LRE+G  FSVNRMLSF+SV+ RL REQSLSFLEFNYMILQAYD
Sbjct: 123 VMVDNADWLDKLEYIPFLREVGQHFSVNRMLSFDSVKLRLDREQSLSFLEFNYMILQAYD 182

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F ELA+ + CRLQMGGSDQWGNI+ GI+L  R+   ++F +T+PL+TTA G KMGKT++G
Sbjct: 183 FRELAQRHGCRLQMGGSDQWGNIVNGIELARRMDGTEVFGVTTPLITTADGGKMGKTMAG 242

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIA 303
           A+WL+++    +++WQ+WRN DD DV  F +  T LP+ EI+R+ KL+G EINEAKKI+A
Sbjct: 243 AVWLHEDQLPHFDYWQFWRNTDDRDVGRFLRLFTDLPLDEIERLEKLEGAEINEAKKILA 302

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
            E T M  GR  AE+AA  A   F+       +P+ +++   ++    ++  ++  GFA 
Sbjct: 303 NEATAMCRGRAAAEEAAETARRTFEEGAAGAALPSFAVAGGSIT----IVDALIGLGFAK 358

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           S  EARR +     +I+   I++E   I +        +KLS GKK+H
Sbjct: 359 SKGEARRLIAGGGARIDGEKIADENAVIAV----GGQPVKLSSGKKHH 402


>gi|148554432|ref|YP_001262014.1| tyrosyl-tRNA synthetase [Sphingomonas wittichii RW1]
 gi|148499622|gb|ABQ67876.1| tyrosyl-tRNA synthetase [Sphingomonas wittichii RW1]
          Length = 420

 Score =  414 bits (1064), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 201/416 (48%), Positives = 281/416 (67%), Gaps = 10/416 (2%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  ++SD L +L ERG+IHQ+++   LD L    V+  YIG+D TA SLH G L Q+MLL
Sbjct: 14  MTEYRSDLLRLLDERGYIHQVTDGAALDALALSSVIPGYIGFDPTAPSLHVGSLVQIMLL 73

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             LQ+ GHKPI LMGGGT  IGDPSF+DE+R++M ++ I  N+  IK IF  F+ +G G 
Sbjct: 74  RRLQQAGHKPIVLMGGGTGKIGDPSFKDEARKLMTTETIAANVASIKRIFERFLTFGDGP 133

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           +DA+M++N  WL +++YI  LRE+G  FS+NRMLSF+SV+ RL REQSLSFLEFNYMILQ
Sbjct: 134 SDAVMVDNADWLDTLEYIPFLREVGQHFSINRMLSFDSVKLRLDREQSLSFLEFNYMILQ 193

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDF+ELAK   CRLQMGGSDQWGNI+ GI+L  R+   ++F +T+PL+TTA G KMGKT
Sbjct: 194 AYDFMELAKRRQCRLQMGGSDQWGNIVNGIELSRRMLGTEVFGVTTPLITTADGGKMGKT 253

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           +SGA+WLN+E    Y++WQ+WRN  D DV  F +  T LP+ EI R+  L+G+EIN+AK 
Sbjct: 254 MSGAVWLNEESLPAYDYWQFWRNSHDKDVGRFLRLFTDLPLDEIARLEALEGQEINQAKI 313

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           ++A E T M  G + A  AA  A   F+       +PT+++ +     G+ L+  +V  G
Sbjct: 314 VLANEATAMCRGADAAAAAAETARRTFEEGQAGGDLPTLAVPEG----GISLIDALVGLG 369

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH-IICH 415
           F  S  EA+R L   A++++     +++ ++++        +K+S GKK H ++ H
Sbjct: 370 FTASKGEAKRKLAEGAVRVDGEPEKDDR-RVEI----GATALKISLGKKKHGLLTH 420


>gi|57238792|ref|YP_179928.1| tyrosyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
 gi|58578717|ref|YP_196929.1| tyrosyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
 gi|81353090|sp|Q5HCB5|SYY_EHRRW RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|57160871|emb|CAH57773.1| tyrosyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
 gi|58417343|emb|CAI26547.1| Tyrosyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
          Length = 418

 Score =  414 bits (1063), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 207/409 (50%), Positives = 284/409 (69%), Gaps = 1/409 (0%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
            KSDFL +L  RG+ +Q ++  ELD L S+  V AYIG+D TA SLH G L Q+M+L +L
Sbjct: 3   LKSDFLGLLYSRGYFNQCTDLAELDQLMSKECVIAYIGFDCTARSLHIGSLMQIMILRYL 62

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           QK GHKPI L+G GT+ IGDPS +D+SR ++ S +IQEN   I+ +   FI  G G +DA
Sbjct: 63  QKCGHKPIVLLGNGTTKIGDPSGKDKSRTLLSSSDIQENTLGIRKVLEKFIVCGGGVSDA 122

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           L++ N  WL  + YID LR IG  FSVN ML+F+SV+ RL+REQ+LSFLEFNYM+LQAYD
Sbjct: 123 LLVYNAEWLDKLNYIDFLRNIGRHFSVNNMLTFDSVKLRLEREQNLSFLEFNYMLLQAYD 182

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+EL + Y+C LQ+GGSDQWGNI+ G++LG +LK P+LF LT+ LL T++G KMGKT  G
Sbjct: 183 FIELNQRYNCLLQIGGSDQWGNIVNGVELGRKLKLPQLFGLTTHLLLTSTGEKMGKTADG 242

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIA 303
           AIWL+ EM SP ++WQY+RN+ D DV  F +  T LP++EI+++  L+G EINEAKKI+A
Sbjct: 243 AIWLDGEMYSPADYWQYFRNVKDEDVGRFLRLFTELPLTEIEKLENLKGYEINEAKKILA 302

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
           TE T + HG + A+  A  A++ F+ + HS  +P   + K E+  G+ ++ L+  +G   
Sbjct: 303 TEATRICHGEKIAQDIAYDALKVFECNDHS-GLPVFYVCKSEIELGLSVVKLLQVSGMEK 361

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           S + A+R +     KIN+ II +   ++ LQDF     IKLS GKK H+
Sbjct: 362 SNSSAKRLINDKGCKINDIIILDVNYKLSLQDFCGMSYIKLSCGKKRHL 410


>gi|329113797|ref|ZP_08242568.1| Tyrosyl-tRNA synthetase [Acetobacter pomorum DM001]
 gi|326696807|gb|EGE48477.1| Tyrosyl-tRNA synthetase [Acetobacter pomorum DM001]
          Length = 422

 Score =  412 bits (1060), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 199/417 (47%), Positives = 283/417 (67%), Gaps = 2/417 (0%)

Query: 3   AFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
            FKS F+   + RGFI Q ++   LD L ++  V AYIG+D TA SLH G L Q+M+L  
Sbjct: 5   GFKSSFMREAAARGFIFQCTDADALDALMAEKSVAAYIGFDPTADSLHVGSLIQIMMLRL 64

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD 122
           LQK GH+PI+L+GGGT+ IGDPSFR+E+RR+M    IQ N+  I+G    F+ +G+G ++
Sbjct: 65  LQKHGHRPIALVGGGTARIGDPSFREEARRLMTEDIIQTNLAGIEGCLRQFLTFGSGASE 124

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
           A+++NN  WL  + YIDLLR++G  FS+NRML+F+SV++RL+REQ L+FLEFNY ILQ+Y
Sbjct: 125 AVLVNNADWLDKLAYIDLLRDVGVHFSINRMLAFDSVKNRLEREQGLTFLEFNYSILQSY 184

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DF EL +  D  LQ+GGSDQWGNII G++L  R     +  LT+PLLTTASG KMGKT +
Sbjct: 185 DFRELNRRMDVVLQLGGSDQWGNIISGVELVRRTDQKSVMGLTTPLLTTASGAKMGKTAN 244

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKII 302
           GA+WL+++    +++WQ+WRN +DADV  F +  T LP+ E  R+  LQG EINEAKK++
Sbjct: 245 GAVWLSEKRLPVFDYWQFWRNTEDADVGRFLRLFTELPLEECARLEALQGAEINEAKKVL 304

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMS-IHSQHMPTISISKDEVSRGMGLLTLIVKAGF 361
           ATE T + HGR  A  AA AA + F+   + +  +P   +++ +++ G+ +  L  +AG 
Sbjct: 305 ATEATALCHGRNAALAAAEAARQTFEEGRVAAADLPVHEVAEADMAAGIPVFRLFAEAGL 364

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLCG 418
             +  EARR ++    ++NN +I +E   I  QD    G IKLS GKK+H++  + G
Sbjct: 365 VKTNGEARRLVRGGGARLNNDVIQDENRLITQQDM-VDGAIKLSAGKKHHVLVKVGG 420


>gi|85708611|ref|ZP_01039677.1| tyrosyl-tRNA synthetase [Erythrobacter sp. NAP1]
 gi|85690145|gb|EAQ30148.1| tyrosyl-tRNA synthetase [Erythrobacter sp. NAP1]
          Length = 408

 Score =  412 bits (1059), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 193/408 (47%), Positives = 277/408 (67%), Gaps = 7/408 (1%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           ++SD L +L ERG +HQI++P  LD L ++ VVT Y+G+D TASSLH G+L  +MLL  L
Sbjct: 3   YESDLLRLLEERGHLHQITDPGALDQLVTKKVVTGYVGFDPTASSLHIGNLASIMLLKRL 62

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q+ GH+PI +MGGGT+ +GDPS +DE+R M+  + +  NIE IKG F   + +   KT A
Sbjct: 63  QQAGHRPIVIMGGGTAKVGDPSGKDETRTMLTEERLASNIEGIKGSFERILDFDDSKTGA 122

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           L++NN+ WL  + YI++LR++G  F++NRML+F+SV+ RL REQ LSFLEFNYMI+QAYD
Sbjct: 123 LLINNDDWLSELGYIEMLRDVGPHFTINRMLTFDSVKLRLDREQPLSFLEFNYMIMQAYD 182

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ LA++YDC+LQ+GGSDQWGNI+ GI+L  R+   +++ +T+PL+T A G KMGK++ G
Sbjct: 183 FLVLARDYDCQLQLGGSDQWGNIVNGIELNRRIDQREVYGVTAPLITRADGAKMGKSVDG 242

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIA 303
           AIWLN++    Y+FWQYWRN DD DV  F +  T + + EI R+ KL+G EIN+AK ++A
Sbjct: 243 AIWLNEDALPAYDFWQYWRNTDDRDVGKFLRLFTDISLDEIARLEKLEGAEINDAKVVLA 302

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
             +T MV G   A  A   A   F      + +PT+S+  D    GM +  ++ + GF  
Sbjct: 303 NAVTAMVRGEAAARAAEETANATFAGGGAGEDLPTLSVGGD----GMRIGAILTQIGFTA 358

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           S  EA+R +   A+K++   +S+    I++ D  S   +KLS GKK H
Sbjct: 359 SNGEAKRKIAEGAVKLDGEPVSDPGSLIEIADGAS---VKLSLGKKKH 403


>gi|262277363|ref|ZP_06055156.1| tyrosyl-tRNA synthetase [alpha proteobacterium HIMB114]
 gi|262224466|gb|EEY74925.1| tyrosyl-tRNA synthetase [alpha proteobacterium HIMB114]
          Length = 412

 Score =  411 bits (1057), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 192/403 (47%), Positives = 281/403 (69%), Gaps = 2/403 (0%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L+I   RG+  Q +N   L  L  +  +  YIG+D TA SLH G L Q+M L  LQK GH
Sbjct: 6   LNIFKNRGYFFQCTNEGALSKLLGKKKIHFYIGFDCTAKSLHVGSLLQIMCLRQLQKLGH 65

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
            P+ L+GGGT++IGDPS ++ESR+++    I++N+  IK +FSSF+    G    + +NN
Sbjct: 66  TPVVLLGGGTTLIGDPSGKEESRKILTEDVIEQNVTSIKKVFSSFLS-NEGDNKVVYVNN 124

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
           + WL  + YI+ LR+ G  F++N+ML+F+SV+ RL REQSLSFLEFNYMI QAYDF++L 
Sbjct: 125 KDWLKGLNYIEFLRDYGKHFTINKMLTFDSVKLRLDREQSLSFLEFNYMIFQAYDFMKLY 184

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
           + +DC LQ+GGSDQWGNI+ G++L  R K+ + + LT+PL+TT+SG KMGKT  GA+WL+
Sbjct: 185 ETHDCLLQIGGSDQWGNIVNGVELIRRSKSKEAYGLTTPLITTSSGAKMGKTEKGAVWLD 244

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITT 308
           KE+ S +++WQ+WRN DD DV+++ K  T L   EI++++KL G  INEAK I+A E T 
Sbjct: 245 KELLSSFDYWQFWRNTDDRDVINYLKLFTELSEEEIEKLSKLDGANINEAKIILANEATK 304

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
           M+HG+EEAEKA   + + FD     +++PT+ I K+E+ +G+ L  +++K GFATS ++ 
Sbjct: 305 MLHGKEEAEKALETSKKTFDDKSFDENLPTLEIKKNELEKGISLKEMLIKIGFATSNSDF 364

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           +R+ ++ A KINN  +++E   + + + D    IKLSFGKK H
Sbjct: 365 KRNFQNAAYKINNENVTDENQALTIDNLDGD-TIKLSFGKKKH 406


>gi|58616779|ref|YP_195978.1| tyrosyl-tRNA synthetase [Ehrlichia ruminantium str. Gardel]
 gi|75356543|sp|Q5FF40|SYY_EHRRG RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|58416391|emb|CAI27504.1| Tyrosyl-tRNA synthetase [Ehrlichia ruminantium str. Gardel]
          Length = 418

 Score =  410 bits (1055), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 205/409 (50%), Positives = 284/409 (69%), Gaps = 1/409 (0%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
            KS FL +L  RG+ +Q ++  ELD L S+  V AYIG+D TA SLH G L Q+M+L +L
Sbjct: 3   LKSGFLGLLYSRGYFNQCTDLAELDQLMSKECVIAYIGFDCTARSLHIGSLMQIMILRYL 62

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           QK GHKPI L+G GT+ IGDPS +D+SR ++ S +IQEN   I+ +   FI  G G +DA
Sbjct: 63  QKCGHKPIVLLGNGTTKIGDPSGKDKSRTLLSSSDIQENTLGIRKVLEKFIVCGDGVSDA 122

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           L++ N  WL  + YID LR IG  FSVN ML+F+SV+ RL+REQ+LSFLEFNYM+LQAYD
Sbjct: 123 LLVYNAEWLDKLNYIDFLRNIGRHFSVNNMLTFDSVKLRLEREQNLSFLEFNYMLLQAYD 182

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+EL + Y+C LQ+GGSDQWGNI+ G++LG +LK P+LF LT+ LL T++G KMGKT +G
Sbjct: 183 FIELNQRYNCLLQIGGSDQWGNIVNGVELGRKLKLPQLFGLTTHLLLTSTGEKMGKTANG 242

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIA 303
           A+WL+ EM SP ++WQY+RN+ D DV  F +  T LP++EI+++  L+G EINEAKKI+A
Sbjct: 243 AVWLDGEMYSPADYWQYFRNVKDEDVGRFLRLFTELPLTEIEKLENLKGYEINEAKKILA 302

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
           TE T + HG + A+  A  A++ F+ + HS  +P   + K E+  G+ ++ L+  +G   
Sbjct: 303 TEATRICHGEKIAQDIAYDALKVFECNDHS-GLPVFYVCKSEIELGLSVVKLLQVSGMEK 361

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           S + A+R +     KIN+ II +   ++ LQDF     IKLS GKK H+
Sbjct: 362 SNSSAKRLINDKGCKINDIIILDVNYKLSLQDFCGMSYIKLSCGKKRHL 410


>gi|157828692|ref|YP_001494934.1| tyrosyl-tRNA synthetase [Rickettsia rickettsii str. 'Sheila Smith']
 gi|165933412|ref|YP_001650201.1| tyrosyl-tRNA synthetase [Rickettsia rickettsii str. Iowa]
 gi|189029765|sp|B0BY69|SYY_RICRO RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|189029766|sp|A8GSQ1|SYY_RICRS RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|157801173|gb|ABV76426.1| tyrosyl-tRNA synthetase [Rickettsia rickettsii str. 'Sheila Smith']
 gi|165908499|gb|ABY72795.1| tyrosyl-tRNA synthetase [Rickettsia rickettsii str. Iowa]
          Length = 411

 Score =  410 bits (1054), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 189/409 (46%), Positives = 282/409 (68%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           F+     +G+ HQ ++   L  +  +  + AYIG+D TA+SLH G L Q+M+L  LQ+ G
Sbjct: 3   FIEEFINKGYFHQCTDLDRLTAITKETKIAAYIGFDCTATSLHIGSLMQIMILRLLQQHG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKPI ++GGGTS IGDP+++DE R+++  ++I +N E IK   S FIK+G GK+DA+ML+
Sbjct: 63  HKPIVIIGGGTSKIGDPTWKDEVRKILSKEDIAKNAEGIKKSLSKFIKFGDGKSDAIMLD 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL S  Y+D LR+ GS+FSVNRML+ +SV+ RL+REQ LSFLEFNYM+LQAYDF  L
Sbjct: 123 NAEWLDSFNYLDFLRDFGSYFSVNRMLTMDSVKLRLEREQHLSFLEFNYMLLQAYDFYYL 182

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
           +K+Y+C LQ+GGSDQWGNI+ G DL  ++   ++F +T+PLLTT+SG KMGKT +GA+WL
Sbjct: 183 SKHYNCSLQLGGSDQWGNIVMGADLIRKISGKEVFGMTTPLLTTSSGAKMGKTAAGAVWL 242

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           N+++ SPY+++QYWRN +DAD+V FAK  +     E++R   L  ++IN AKK +A E+T
Sbjct: 243 NEDLLSPYDYYQYWRNCEDADIVRFAKLYSEFTQEELNRFESLAAEDINAAKKQLAYELT 302

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
            + H  + A+ A   A++ F+     +++PT+ + ++ +  G+    L  +AG ATS +E
Sbjct: 303 KLCHSEQAAKSALETAVKIFEEGQIDENLPTVVLEQEVLQAGISAYELFYEAGLATSKSE 362

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           AR+ ++ N  KIN+ ++++E + I          IKLS GKK HI+  +
Sbjct: 363 ARKLIRGNGAKINDRLVADENMIINTNFLLDKKVIKLSAGKKRHILVRV 411


>gi|114768827|ref|ZP_01446453.1| tyrosyl-tRNA synthetase [alpha proteobacterium HTCC2255]
 gi|114549744|gb|EAU52625.1| tyrosyl-tRNA synthetase [alpha proteobacterium HTCC2255]
          Length = 416

 Score =  410 bits (1054), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 197/412 (47%), Positives = 269/412 (65%), Gaps = 2/412 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KS+FL  +  RGF+   ++ + LD    +G + AYIG+D TA SLH G L Q+M+L WLQ
Sbjct: 6   KSEFLQEMLSRGFLQDCTDIQGLDEKLLEGCMPAYIGFDATADSLHIGSLIQIMMLRWLQ 65

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           KTGHKPI LMGGGT+ IGDPS +DESR+++ ++ I ENI  I+ +F  ++ +G    DA 
Sbjct: 66  KTGHKPIPLMGGGTTKIGDPSGKDESRQLITTEIINENINGIQKVFEKYLSFGDNSNDAK 125

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           ++NN  WL  + YI+ LR+IG  F++NRM+S ESV+ RL REQ L+FLEFNYM+LQAYDF
Sbjct: 126 IINNAEWLDKLNYIEFLRDIGKHFTINRMISMESVKLRLDREQPLTFLEFNYMLLQAYDF 185

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL   YD  LQMGGSDQWGNI+ GIDL  RL    +F LT+PLLT A G+KMGK+ +GA
Sbjct: 186 MELNNRYDVSLQMGGSDQWGNIVNGIDLTRRLNKKSVFGLTTPLLTKADGSKMGKSANGA 245

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           IWLN +  SPY FWQ+WRN  DADV  F K  T LP+SE DR+  L+G+ INEAK I+A 
Sbjct: 246 IWLNSDKLSPYEFWQFWRNTLDADVGKFLKLFTELPVSECDRLGSLEGQNINEAKIILAN 305

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E+T M HG E A  +   A + F      +++PT+ I   E+  G+     +V+ G  +S
Sbjct: 306 EVTKMCHGEEAAISSEKTAHKVFTEDSSDENLPTLEILNTEIIDGISFTQALVRTGLVSS 365

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             EA+R +     ++N+ +I++    +   D   T   K+S  KK H +  +
Sbjct: 366 GKEAKRIIAGGGARLNDQVINDAGFMLYAADLQKTP--KISASKKKHALIKV 415


>gi|197105298|ref|YP_002130675.1| tyrosyl-tRNA synthetase [Phenylobacterium zucineum HLK1]
 gi|196478718|gb|ACG78246.1| tyrosyl-tRNA synthetase [Phenylobacterium zucineum HLK1]
          Length = 418

 Score =  409 bits (1052), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 204/413 (49%), Positives = 285/413 (69%), Gaps = 1/413 (0%)

Query: 2   PAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
           PAFKS+FL  L  RG+IHQIS+P+ELD   + GV+ AYIG+D TA+SLH G L Q+M+L 
Sbjct: 4   PAFKSEFLKTLQARGYIHQISHPQELDEATAGGVIAAYIGFDATATSLHVGSLIQIMMLR 63

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKT 121
            LQ+ GHKP+ LMGGGT+ +GDPS RDESR+M+   +I+ NI  I+ +F  F+ +G G T
Sbjct: 64  RLQQAGHKPVVLMGGGTTKVGDPSGRDESRKMLTDADIERNIAGIRTVFEKFLTFGNGPT 123

Query: 122 DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA 181
           DA+M+NN+ WL  + Y++ LRE G  F+VNRML+F+SVR RL+REQ L+FLEFNYM++QA
Sbjct: 124 DAVMVNNDAWLSKLGYLEFLREYGPHFTVNRMLTFDSVRLRLEREQPLTFLEFNYMLMQA 183

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            DF  L +    +LQMGGSDQWGNII G++L  R+     FALT+PLLTT+SG KMGKT 
Sbjct: 184 VDFRHLNRTMGVQLQMGGSDQWGNIINGVELVRRMDQKAAFALTTPLLTTSSGAKMGKTA 243

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKI 301
            GA+WLN ++ SPY++WQ+WRN +DADV  F +  T LP+ EI R+  L+G +IN+AKK+
Sbjct: 244 QGAVWLNADLLSPYDYWQFWRNTEDADVGRFLRLFTDLPLDEIARLEALEGAQINDAKKV 303

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGF 361
           +A E T M+HG E A  A  AA   F+    S  +PT  +++ +++ G+ L  L   AG 
Sbjct: 304 LANEATRMLHGEEAARAAEAAARAAFEEGRLSGDLPTHEVARADLAAGIALAALAADAGL 363

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           A+S  EARR  +   +++N++  ++    +   D    G +KL+ GKK  ++ 
Sbjct: 364 ASSRGEARRLAQGGGLRVNDAQETDGARLVSEADL-VDGVVKLAAGKKKIVLV 415


>gi|238650336|ref|YP_002916188.1| tyrosyl-tRNA synthetase [Rickettsia peacockii str. Rustic]
 gi|259517015|sp|C4K0N9|SYY_RICPU RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|238624434|gb|ACR47140.1| tyrosyl-tRNA synthetase [Rickettsia peacockii str. Rustic]
          Length = 411

 Score =  409 bits (1051), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 189/409 (46%), Positives = 282/409 (68%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           F+     +G+ HQ ++   L  +  +  + AYIG+D TA+SLH G L Q+M+L  LQ+ G
Sbjct: 3   FIEEFINKGYFHQCTDLDRLTAITKETKIAAYIGFDCTATSLHIGSLMQIMILRLLQQHG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKPI ++GGGTS IGDP+++DE R+++  ++I +N E IK   S FIK+G GK+DA+ML+
Sbjct: 63  HKPIVIIGGGTSKIGDPTWKDEVRKILSKEDIAKNAEGIKKSLSKFIKFGDGKSDAIMLD 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL S  Y+D LR+ GS+FSVNRML+ +SV+ RL+REQ LSFLEFNYM+LQAYDF  L
Sbjct: 123 NAEWLDSFNYLDFLRDFGSYFSVNRMLTMDSVKLRLEREQHLSFLEFNYMLLQAYDFYYL 182

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
           +K+Y+C LQ+GGSDQWGNI+ G DL  ++   ++F +T+PLLTT+SG KMGKT +GA+WL
Sbjct: 183 SKHYNCSLQLGGSDQWGNIVMGADLIRKISGKEVFGMTTPLLTTSSGAKMGKTAAGAVWL 242

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           N+++ SPY+++QYWRN +DAD+V FAK  +     E++R   L  ++IN AKK +A E+T
Sbjct: 243 NEDLLSPYDYYQYWRNCEDADIVRFAKLYSEFTQEELNRFESLAAEDINAAKKQLAYELT 302

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
            + H  + A+ A   A++ F+     +++PT+ + ++ +  G+    L  +AG ATS +E
Sbjct: 303 KLCHSEQAAKSALETAVKIFEEGQIDENLPTVVLEQEVLQAGISAYELFHEAGLATSKSE 362

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           AR+ ++ N  KIN+ ++++E + I          IKLS GKK HI+  +
Sbjct: 363 ARKLIRGNGAKINDRLVADENMIINTNFLLDKKVIKLSAGKKRHILVRV 411


>gi|299472939|emb|CBN77340.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 524

 Score =  409 bits (1051), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 196/417 (47%), Positives = 271/417 (64%), Gaps = 3/417 (0%)

Query: 3   AFKSDFLSILSERGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLF 61
           + +S FL  L ERGF HQ +N   LD     G VV AY+G+D TA SLH G L Q+M+L 
Sbjct: 107 SVESPFLQTLVERGFYHQCTNVEGLDEKLRAGEVVKAYLGFDATADSLHVGSLLQIMILR 166

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKT 121
            LQK GH+PI L+GGGT+ IGDPS +DE+R+++    IQ NI+ +  +FS F+ +G G T
Sbjct: 167 HLQKAGHQPIVLVGGGTTKIGDPSGKDEARQLLDDAAIQRNIDGLASVFSKFLTFGDGPT 226

Query: 122 DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA 181
           DA ++NN  WL  + Y+D LRE G  F++NRM++++SVR RL+REQ L+FLEFNYM+LQA
Sbjct: 227 DAKLVNNNEWLNQLSYLDFLREYGPHFTINRMMTYDSVRLRLEREQPLTFLEFNYMLLQA 286

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
           YDF EL + Y C LQMGGSDQWGN++ G+DLG R++  +LFALT+PL+TT+ G KMGK+ 
Sbjct: 287 YDFTELYRRYGCVLQMGGSDQWGNMVNGVDLGRRVEKAELFALTAPLITTSEGKKMGKSA 346

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKI 301
           +GAIWLN E    Y++WQ+WRN DDADV+ F K  T L M EI ++ +L G  INEAK +
Sbjct: 347 AGAIWLNAEKLPEYDYWQFWRNTDDADVIRFLKLFTELSMDEILKLEQLTGAGINEAKIV 406

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQH--MPTISISKDEVSRGMGLLTLIVKA 359
           +A E T ++HG    ++      + F   +   +  +P   I   E   GM ++ L ++ 
Sbjct: 407 LADETTKLLHGEACLKEIHQTVKQVFAGGVGGSNAALPRAKIESAEAEAGMAVVDLFIRL 466

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             A + +E RR +K    K+N+  I +E   + L  FD    +KLS GKK H I  +
Sbjct: 467 ELAKTKSEVRRLIKGGGAKLNDQKIVDEGFVVDLSTFDGKDELKLSSGKKRHGIIFM 523


>gi|15892746|ref|NP_360460.1| tyrosyl-tRNA synthetase [Rickettsia conorii str. Malish 7]
 gi|25009439|sp|Q92HE8|SYY_RICCN RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|15619924|gb|AAL03361.1| tyrosyl-tRNA synthetase [Rickettsia conorii str. Malish 7]
          Length = 411

 Score =  409 bits (1050), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 189/409 (46%), Positives = 281/409 (68%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           F+     +G+ HQ ++   L  +  +  + AYIG+D TA+SLH G L Q+M+L  LQ+ G
Sbjct: 3   FIEEFINKGYFHQCTDLDRLTAITKETKIAAYIGFDCTATSLHIGSLMQIMILRLLQQHG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKPI ++GGGTS IGDP+++DE R+++  ++I +N E IK   S FIK+G GK+DA+ML+
Sbjct: 63  HKPIVIIGGGTSKIGDPTWKDEVRKILSKEDIAKNAEGIKKSLSKFIKFGDGKSDAIMLD 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL S  Y+D LR+ GS+FSVNRML+ +SV+ RL+REQ LSFLEFNYM+LQAYDF  L
Sbjct: 123 NAEWLDSFNYLDFLRDFGSYFSVNRMLTMDSVKLRLEREQHLSFLEFNYMLLQAYDFYYL 182

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
           +K+Y+C LQ+GGSDQWGNI+ G DL  ++   ++F +T+PLLTT+SG KMGKT +GA+WL
Sbjct: 183 SKHYNCSLQLGGSDQWGNIVMGADLIRKISGKEVFGMTTPLLTTSSGAKMGKTAAGAVWL 242

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           N+++ SPY+++QYWRN +DAD+V FAK  +     E++R   L  ++IN AKK +A E+T
Sbjct: 243 NEDLLSPYDYYQYWRNCEDADIVRFAKLYSEFTQEELNRFESLAAEDINAAKKQLAYELT 302

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
            + H  + A+ A   A++ F+     +++PT+ + ++ +  G+    L  +AG ATS +E
Sbjct: 303 KLCHSEQAAKSALETAVKIFEEGQIDENLPTVVLEQEVLQAGISAYELFHEAGLATSKSE 362

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           AR+ ++ N  KIN+ ++ +E + I          IKLS GKK HI+  +
Sbjct: 363 ARKLIRGNGAKINDRLVEDENMIINTNFLLDKKVIKLSAGKKKHILVRV 411


>gi|73666688|ref|YP_302704.1| tyrosyl-tRNA synthetase [Ehrlichia canis str. Jake]
 gi|97201350|sp|Q3YT49|SYY_EHRCJ RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|72393829|gb|AAZ68106.1| tyrosyl-tRNA synthetase [Ehrlichia canis str. Jake]
          Length = 418

 Score =  409 bits (1050), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 199/409 (48%), Positives = 278/409 (67%), Gaps = 1/409 (0%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
            +S FLS L  RG+ +Q +N   LD L S+  V  YIG+D TA SLH G L Q+M+L +L
Sbjct: 3   LESQFLSFLYSRGYFNQCTNVSALDQLMSKQCVPTYIGFDCTAKSLHVGSLVQIMILRYL 62

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           QK GHKPI L+G GT+ IGDPS +D+SR M+ S EI+EN   I  +   FIK+G+G TD 
Sbjct: 63  QKFGHKPIVLLGNGTTKIGDPSGKDKSRTMLCSDEIEENALGIYDVLKKFIKFGSGSTDG 122

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           L++ N  WL  + YI+ LR IG  FSVN ML+F+SVR RL+REQ+LSFLEFNYM+LQ+YD
Sbjct: 123 LLVCNAEWLDDLNYIEFLRNIGRHFSVNNMLTFDSVRLRLEREQNLSFLEFNYMLLQSYD 182

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           FVEL + Y+C LQ+GGSDQWGNI+ G++LG +L+  +LF LT+ L+ T+SG KMGKT  G
Sbjct: 183 FVELNRRYNCLLQIGGSDQWGNIVSGVELGRKLQLSELFGLTTNLVLTSSGEKMGKTAQG 242

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIA 303
           A+WLN +M SP ++WQY+RN+ D DV  F K  T LP+ +I  +  LQG EINEAKK++A
Sbjct: 243 AVWLNGDMYSPVDYWQYFRNVRDEDVGRFLKLFTELPLDKIKELELLQGHEINEAKKMLA 302

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
           TE T + HG E A+  A  A++ F+ +  S  + T  + + +V  G+ ++ L+  +G   
Sbjct: 303 TEATKICHGEEIAKNIAADALKVFECNDDS-GLSTFYVDRCDVDLGLPIIKLLQISGLEK 361

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           S++ ARR +     KIN+ ++ +   ++ L+ F +   +KLS GKK H+
Sbjct: 362 SSSSARRLINDKGCKINDVVVLDVNYKLSLEHFCNASYVKLSCGKKRHL 410


>gi|87200116|ref|YP_497373.1| tyrosyl-tRNA synthetase [Novosphingobium aromaticivorans DSM 12444]
 gi|97201733|sp|Q2G6I4|SYY_NOVAD RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|87135797|gb|ABD26539.1| tyrosyl-tRNA synthetase [Novosphingobium aromaticivorans DSM 12444]
          Length = 409

 Score =  408 bits (1048), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 204/415 (49%), Positives = 281/415 (67%), Gaps = 8/415 (1%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  + S  L +LSERG+IHQ+++   LD L ++ V+  YIG+D TA SLH G + Q+MLL
Sbjct: 1   MTEYASSLLRLLSERGYIHQMTDADALDALAAKQVIPGYIGFDPTAPSLHVGSMVQIMLL 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             LQ+ GHKPI LMGGGT  IGDPSF+DE+R++M +  I  N+  IK +F  F+ +G G 
Sbjct: 61  RRLQQAGHKPIVLMGGGTGKIGDPSFKDEARKLMTNDVIAANVASIKTVFERFLTFGDGP 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           TDA+M++N  WL  ++YI  LRE+G  FSVNRMLSF+SV+ RL REQSLSFLEFNYMILQ
Sbjct: 121 TDAVMVDNADWLDRLEYIPFLREVGQHFSVNRMLSFDSVKQRLDREQSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDF EL++ + CRLQMGGSDQWGNI+ GI+L  R+   ++F +T+PLLTTA G+KMGKT
Sbjct: 181 AYDFRELSQRHACRLQMGGSDQWGNIVNGIELTRRMDGVEVFGVTTPLLTTADGSKMGKT 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
            +GA+WLN++    ++FWQYWRN DD DV  F +  T LP+ EI R+  L+G EIN AK 
Sbjct: 241 AAGAVWLNEDALPAWDFWQYWRNTDDRDVGKFLRLFTDLPLDEIARLEALEGSEINAAKV 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           ++A E+T +V G E A+ A   A   F      Q +PT+S+ + E+    G++  +V  G
Sbjct: 301 VLANEVTRLVRGEEAAKAAEATAAATFAGGGLGQDLPTLSVGESEI----GIVDALVGLG 356

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           FA S  EA+R +     +++   +++E  +I + D +    I++S GKK H I  
Sbjct: 357 FAASRGEAKRLVAGGGARVDGEPVTDEGFRILVNDKE----IRVSSGKKKHGILR 407


>gi|157964687|ref|YP_001499511.1| tyrosyl-tRNA synthetase [Rickettsia massiliae MTU5]
 gi|189029764|sp|A8F228|SYY_RICM5 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|157844463|gb|ABV84964.1| Tyrosyl-tRNA synthetase [Rickettsia massiliae MTU5]
          Length = 411

 Score =  408 bits (1048), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 189/409 (46%), Positives = 281/409 (68%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           F+     +G+ HQ ++   L  +  +  + AYIG+D TA+SLH G L Q+M+L  LQ+ G
Sbjct: 3   FIEEFINKGYFHQCTDLDRLTAITKETKIAAYIGFDCTATSLHIGSLMQIMILRLLQQHG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKPI ++GGGTS IGDP+++DE R+++  ++I +N E IK   S FIK+G GK+DA+ML+
Sbjct: 63  HKPIVIIGGGTSKIGDPTWKDEVRKILSKEDIAKNAEGIKKSLSKFIKFGDGKSDAIMLD 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL S  Y+D LR+ GS+FSVNRML+ +SV+ RL+REQ LSFLEFNYM+LQAYDF  L
Sbjct: 123 NAEWLDSFNYLDFLRDFGSYFSVNRMLTMDSVKLRLEREQHLSFLEFNYMLLQAYDFYYL 182

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
           +K+Y+C LQ+GGSDQWGNI+ G DL  ++   ++F +T+PLLTT+SG KMGKT +GA+WL
Sbjct: 183 SKHYNCSLQLGGSDQWGNIVMGADLIRKISGKEVFGMTTPLLTTSSGAKMGKTAAGAVWL 242

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           N+++ SPY+++QYWRN +DAD+V FAK  +     E++R   L  ++IN AKK +A E+T
Sbjct: 243 NEDLLSPYDYYQYWRNCEDADIVRFAKLYSEFTQEELNRFEILAAEDINAAKKQLAYELT 302

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
            + H  + A+ A   A++ F+     +++PT+ + ++ +  G+    L  +AG ATS +E
Sbjct: 303 KLCHSEQAAKSALETAVKIFEEGQIDENLPTVVLEQEVLQAGISAYELFHEAGLATSKSE 362

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           AR+ ++ N  KIN+ ++ +E + I          IKLS GKK HI+  +
Sbjct: 363 ARKLIRGNGAKINDRLVEDENMIINTNFLLDKNVIKLSAGKKRHILVRV 411


>gi|254456480|ref|ZP_05069909.1| tyrosyl-tRNA synthetase [Candidatus Pelagibacter sp. HTCC7211]
 gi|207083482|gb|EDZ60908.1| tyrosyl-tRNA synthetase [Candidatus Pelagibacter sp. HTCC7211]
          Length = 409

 Score =  407 bits (1047), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 197/405 (48%), Positives = 280/405 (69%), Gaps = 4/405 (0%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           FL    +RGF +Q +N  EL  L  +  +  YIG+D TA SLH G L Q+M L  LQK G
Sbjct: 4   FLKEFKDRGFFYQCTNETELSDLMDKEKIKGYIGFDCTAESLHVGSLLQIMCLRLLQKNG 63

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+PI L+GGGT+ IGDPS +D++R+++   EI++NIE I+ I   F+      T  + +N
Sbjct: 64  HRPIVLLGGGTTRIGDPSGKDKTRKILDEDEIEKNIENIQNILKKFLDNDNSDTKPIFVN 123

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N TWL  + YI  LR+IG  F++N+ML+F+SV++RL+REQSLS++EFNYMILQAYDF+EL
Sbjct: 124 NYTWLKDLNYISFLRDIGKHFTINKMLTFDSVKTRLEREQSLSYMEFNYMILQAYDFLEL 183

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            KN +C LQ+GGSDQWGNI+ G+DL ++    + F LT+PL+T ASG KMGKT +GAIWL
Sbjct: 184 NKNENCALQIGGSDQWGNIVNGVDLIKKYSNKQGFGLTTPLITLASGAKMGKTENGAIWL 243

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           +++    Y++WQ+WRN DD DVV F K  T L ++EI+   K++ K+INE K ++A E T
Sbjct: 244 DEKYLPAYDYWQFWRNTDDRDVVKFLKFFTDLEIAEIN---KVKEKDINELKTLLANEAT 300

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
           TM+HG++ A+++  AA E F  +    + P+I ISK++  + +G++ L++ +    S +E
Sbjct: 301 TMLHGQKAAKESEQAAREAFSGNSLGSNSPSIKISKEDFEKKLGIIDLVILSKLENSKSE 360

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
            RR +K NAIKIN+ IIS+EKL I   DF     +KLS GKK H+
Sbjct: 361 IRRLIKGNAIKINDEIISDEKLIIN-HDFFKEDYLKLSIGKKRHL 404


>gi|229586879|ref|YP_002845380.1| tyrosyl-tRNA synthetase [Rickettsia africae ESF-5]
 gi|259517013|sp|C3PNX7|SYY_RICAE RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|228021929|gb|ACP53637.1| Tyrosyl-tRNA synthetase [Rickettsia africae ESF-5]
          Length = 411

 Score =  407 bits (1047), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 189/409 (46%), Positives = 280/409 (68%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           F+     +G+ HQ ++   L  +  +  + AYIG+D TA+SLH G L Q+M+L  LQ+ G
Sbjct: 3   FIEEFINKGYFHQCTDLDRLTAITKETKIAAYIGFDCTATSLHIGSLMQIMILRLLQQHG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKPI ++GGGTS IGDP+++DE R+++  ++I +N E IK   S FIK+G GK+DA+ML+
Sbjct: 63  HKPIVIIGGGTSKIGDPTWKDEVRKIVSKEDIAKNAEGIKKSLSKFIKFGDGKSDAIMLD 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL S  Y+D LR+ GS+FSVNRML+ +SV+ RL+REQ LSFLEFNYM+LQAYDF  L
Sbjct: 123 NAEWLDSFNYLDFLRDFGSYFSVNRMLTMDSVKLRLEREQHLSFLEFNYMLLQAYDFYYL 182

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
           +K+Y+C LQ+GGSDQWGNI+ G DL  ++   ++F +T+PLLTT+SG KMGKT +GA+WL
Sbjct: 183 SKHYNCSLQLGGSDQWGNIVMGADLIRKISGKEVFGMTTPLLTTSSGAKMGKTAAGAVWL 242

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           N+++ SPY+++QYWRN +DAD+V FAK  +     E++R   L  ++IN AKK +A E+T
Sbjct: 243 NEDLLSPYDYYQYWRNCEDADIVRFAKLYSEFTQEELNRFESLAAEDINAAKKQLAYELT 302

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
            + H  + A+ A   A++ F+     +++PT+ + K+ +  G+    L  +AG  TS +E
Sbjct: 303 KLCHSEQAAKSALETAVKIFEEGQIDENLPTVVLEKEVLQAGISAYELFHEAGLVTSKSE 362

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           AR+ ++ N  KIN+ ++ +E + I          IKLS GKK HI+  +
Sbjct: 363 ARKLIRGNGAKINDRLVEDENMIINTNFLLDKKVIKLSAGKKRHILVRV 411


>gi|258543630|ref|YP_003189063.1| tyrosyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-01]
 gi|256634708|dbj|BAI00684.1| tyrosyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-01]
 gi|256637764|dbj|BAI03733.1| tyrosyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-03]
 gi|256640818|dbj|BAI06780.1| tyrosyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-07]
 gi|256643873|dbj|BAI09828.1| tyrosyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-22]
 gi|256646928|dbj|BAI12876.1| tyrosyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-26]
 gi|256649981|dbj|BAI15922.1| tyrosyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-32]
 gi|256652971|dbj|BAI18905.1| tyrosyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-01-42C]
 gi|256656025|dbj|BAI21952.1| tyrosyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-12]
          Length = 422

 Score =  406 bits (1044), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 196/415 (47%), Positives = 281/415 (67%), Gaps = 2/415 (0%)

Query: 3   AFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
            FKS F+   + RGFI Q ++   LD L ++  V AYIG+D TA SLH G L Q+M+L  
Sbjct: 5   GFKSSFMREAAARGFIFQCTDADALDALMAEKSVAAYIGFDPTADSLHVGSLIQIMMLRL 64

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD 122
           LQK GH+PI+L+GGGT+ IGDPSFR+E+RR+M    IQ N+  I+G    F+ +G+G ++
Sbjct: 65  LQKHGHRPIALVGGGTARIGDPSFREEARRLMTEDIIQTNLAGIEGCLRQFLTFGSGASE 124

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
           A ++NN  WL  + YIDLLR++G  FS+NRML+F+SV++RL+REQ L+FLEFNY ILQ+Y
Sbjct: 125 AALVNNADWLDKLAYIDLLRDVGVHFSINRMLAFDSVKNRLEREQGLTFLEFNYSILQSY 184

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DF EL +  +  LQ+GGSDQWGNII G++L  R     +  LT+PLLTT+SG KMGKT +
Sbjct: 185 DFRELNRRMNVVLQLGGSDQWGNIISGVELVRRTDQKSVMGLTTPLLTTSSGAKMGKTAN 244

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKII 302
           GA+WL+++    +++WQ+WRN +DADV  F +  T LP+ E  R+  LQG EINEAKK++
Sbjct: 245 GAVWLSEKRLPVFDYWQFWRNTEDADVGRFLRLFTELPLEECARLEALQGAEINEAKKVL 304

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMS-IHSQHMPTISISKDEVSRGMGLLTLIVKAGF 361
           ATE T + HGR  A  AA AA + F+   + +  +P   +++ +++ G+ +  L  +AG 
Sbjct: 305 ATEATALCHGRNAALAAAEAARQTFEEGRVAAADLPVHEVAEADMAAGIPVFRLFAEAGL 364

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             +  EARR ++    ++NN +I +E   I  QD    G IKLS GKK+H++  +
Sbjct: 365 VKTNGEARRLVRGGGARLNNDVIQDENKLITQQDM-VDGAIKLSAGKKHHVLVKV 418


>gi|260427816|ref|ZP_05781795.1| tyrosyl-tRNA synthetase [Citreicella sp. SE45]
 gi|260422308|gb|EEX15559.1| tyrosyl-tRNA synthetase [Citreicella sp. SE45]
          Length = 455

 Score =  406 bits (1043), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 215/453 (47%), Positives = 276/453 (60%), Gaps = 43/453 (9%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KSDF+ ++ ERGF+   ++ + LD   S+GVVTAYIGYD TA SLH GHL  +M+L WLQ
Sbjct: 6   KSDFMRVMMERGFLADCTDYQGLDEALSKGVVTAYIGYDATAKSLHVGHLLNIMMLRWLQ 65

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG------- 117
           KTGHKPI+LMGGGT+ +GDPSFR + R ++  ++I  NI+ +K +F+ ++KY        
Sbjct: 66  KTGHKPITLMGGGTTKVGDPSFRSDERPLLGPEQIDANIDGMKQVFAKYLKYQEPAEERF 125

Query: 118 ---------------------TGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSF 156
                                   TDALMLNN  WL  + Y++ LR+IG  FSVNRMLSF
Sbjct: 126 WAGRMARPTDQRDINWAIDEEKATTDALMLNNAEWLDGLNYLEFLRDIGRHFSVNRMLSF 185

Query: 157 ESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL 216
           ESV+SRL REQSLSFLEFNYMILQAYDF+EL + Y C LQMGGSDQWGNII GIDL  R+
Sbjct: 186 ESVKSRLDREQSLSFLEFNYMILQAYDFLELNRRYGCLLQMGGSDQWGNIINGIDLTRRV 245

Query: 217 KTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRL 276
              +++ LTSPLLTT+ G KMGK+  GA+WLN +M SPY+FWQ+WRN  DADV  F K  
Sbjct: 246 LDHEIYGLTSPLLTTSDGRKMGKSQGGAMWLNADMLSPYDFWQFWRNTTDADVGRFLKLY 305

Query: 277 TTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHG-----------REEAEKAATA-AM 324
           T LP+ E +R+  L G EIN AK I+A E+TT+ HG           RE  EK      +
Sbjct: 306 TELPLEECERLGALGGSEINAAKIILANEVTTLCHGAEAAAAAEATAREVFEKGGIGDDL 365

Query: 325 ECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSII 384
             FD+S     +P   +   E        ++ V A  A S  +A+R +  N   +N+  +
Sbjct: 366 PRFDLS-DIPLLPADVVEAQEPGMYCAAASIFVGAKLAKSGKDAKRLISENGALVNDVPV 424

Query: 385 SNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
                 IK  D   T  +KLS GKK H +  L 
Sbjct: 425 KAAFPFIKADDL--TDYVKLSAGKKRHALVKLA 455


>gi|239946891|ref|ZP_04698644.1| tyrosyl-tRNA synthetase [Rickettsia endosymbiont of Ixodes
           scapularis]
 gi|239921167|gb|EER21191.1| tyrosyl-tRNA synthetase [Rickettsia endosymbiont of Ixodes
           scapularis]
          Length = 411

 Score =  406 bits (1043), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 189/409 (46%), Positives = 279/409 (68%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           F+     +G+ HQ ++   L  +  +  + AYIG+D TA+SLH G L Q+M+L  LQ+ G
Sbjct: 3   FIEEFINKGYFHQCTDLDRLTAITKETKIAAYIGFDCTATSLHIGSLMQIMILRLLQQYG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKPI ++GGGTS IGDPS +DE+R+ +   +I+ N E IK   S FIK+G GK+DA+ML+
Sbjct: 63  HKPIVIIGGGTSKIGDPSGKDEARKALTKDDIKRNAEGIKKSLSKFIKFGDGKSDAIMLD 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL S+ Y+D LR+ GS+FSVNRML+ +SVR RL+REQ LSFLEFNYM+LQAYDF  L
Sbjct: 123 NAEWLDSLNYLDFLRDFGSYFSVNRMLTMDSVRLRLEREQHLSFLEFNYMLLQAYDFYYL 182

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
           +K+Y+C LQ+GGSDQWGNI+ G DL  ++   ++F +T+PLLTT+SG KMGKT  GA+WL
Sbjct: 183 SKHYNCSLQLGGSDQWGNIVMGADLIRKISGKEVFGMTTPLLTTSSGAKMGKTAVGAVWL 242

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           N+++ SPY+++QYWRN +DADV+ FAK  + L   E+++   L  ++IN AKK +A E+T
Sbjct: 243 NEDLLSPYDYYQYWRNCEDADVIRFAKLYSELTSEELNKFESLAAEDINAAKKQLAYELT 302

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
            + H  + A+ A   A++ F+     +++PT+ + ++ +  G+    L  +AG ATS +E
Sbjct: 303 KLCHSEQAAKSALKTAVKIFEEGQIDENLPTVVLEQEVLQAGISAYELFHEAGLATSKSE 362

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            R+ ++    KIN+ ++++E + I          IKLS GKK HI+  +
Sbjct: 363 TRKLIRGKGAKINDELVADENMIINTNFLLDKNVIKLSAGKKRHILVRI 411


>gi|58697387|ref|ZP_00372710.1| tyrosyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           simulans]
 gi|58536210|gb|EAL59772.1| tyrosyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           simulans]
          Length = 352

 Score =  405 bits (1041), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 188/349 (53%), Positives = 258/349 (73%), Gaps = 2/349 (0%)

Query: 6   SDFLSILSERGFIHQISNPRELD-ILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           S+FL+ + ERG+++Q +N   LD +L     + AYIG+D TA SLHAGHL Q+M+L  LQ
Sbjct: 5   SEFLNFIQERGYLYQCTNIEGLDQLLLQSNYIVAYIGFDCTAPSLHAGHLIQIMMLCHLQ 64

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           K G+KPI L+GGGT+ IGDPSF+D++R ++  + I +N   I+ I    + +   KT A+
Sbjct: 65  KFGYKPIVLLGGGTTKIGDPSFKDKARSILPVENINQNTSSIRRILEKMVSFNDSKTGAM 124

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           ++NN  WL +IKYID LR+IG++FSVNRMLSF+SV++RL REQ+LSFLEFNYM+LQAYDF
Sbjct: 125 IVNNADWLDNIKYIDFLRDIGAYFSVNRMLSFDSVKTRLDREQTLSFLEFNYMLLQAYDF 184

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL K YDCRLQ+GGSDQWGNI+ GI+LG++L  P+LF LT PLL  A G KMGKT SGA
Sbjct: 185 IELNKKYDCRLQIGGSDQWGNIVNGIELGKKLNLPELFGLTMPLLLNAQGKKMGKTESGA 244

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WL+  M  PY++WQY+RN+DD DV  F + LT +P+ EI ++  L+ +EINEAKK++AT
Sbjct: 245 VWLDDNMLKPYDYWQYFRNVDDQDVGRFLRLLTDVPIDEIRKLESLKDQEINEAKKVLAT 304

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLL 353
           E+T + HG +EAE A  AA+  F+    S  +P   I K++V+ G+ L+
Sbjct: 305 EVTKICHGDKEAELAQFAAISAFENE-DSSLLPDYIIKKEQVASGISLV 352


>gi|34581532|ref|ZP_00143012.1| tyrosyl-tRNA synthetase [Rickettsia sibirica 246]
 gi|28262917|gb|EAA26421.1| tyrosyl-tRNA synthetase [Rickettsia sibirica 246]
          Length = 411

 Score =  405 bits (1041), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 187/409 (45%), Positives = 280/409 (68%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           F+     +G+ HQ ++   L  +  +  + AYIG+D TA+SLH G L Q+M+L  LQ+ G
Sbjct: 3   FIEEFIHKGYFHQCTDLDRLTAITKETKIAAYIGFDCTATSLHIGSLMQIMILRLLQQHG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKPI ++GGGTS IGDP+++DE R+++  ++I +N E IK   S FIK+G GK+DA+ML+
Sbjct: 63  HKPIVIIGGGTSKIGDPTWKDEMRKILSKEDIAKNAEGIKKSLSKFIKFGDGKSDAIMLD 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL S  Y+D LR+ GS+FSVNRML+ +SV+ RL+R+Q LSFLEFNYM+LQAYDF  L
Sbjct: 123 NAEWLDSFNYLDFLRDFGSYFSVNRMLTMDSVKLRLERQQHLSFLEFNYMLLQAYDFYYL 182

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
           +K+Y+C LQ+GGSDQWGNI+ G DL  ++   ++F +T+PLLTT+SG KMGKT +GA+WL
Sbjct: 183 SKHYNCSLQLGGSDQWGNIVMGADLIRKISGKEVFGMTTPLLTTSSGAKMGKTAAGAVWL 242

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           N+++ SPY+++QYWRN +DAD+V FAK  +     E++R   L  ++IN AKK +A E+T
Sbjct: 243 NEDLLSPYDYYQYWRNCEDADIVRFAKLYSEFTQEELNRFESLAAEDINAAKKQLAYELT 302

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
            + H  + A+ A   A++ F+     +++PT+ + ++ +  G+    L  +AG  TS +E
Sbjct: 303 KLCHSEQAAKSALETAVKIFEEGQIDENLPTVVLEQEVLQAGISAYELFHEAGLVTSKSE 362

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           AR+ ++ N  KIN+ ++ +E + I          IKLS GKK HI+  +
Sbjct: 363 ARKLIRGNGAKINDRLVEDENMIINTNFLLDKKVIKLSAGKKRHILVRV 411


>gi|67459269|ref|YP_246893.1| tyrosyl-tRNA synthetase [Rickettsia felis URRWXCal2]
 gi|75536299|sp|Q4UL45|SYY_RICFE RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|67004802|gb|AAY61728.1| Tyrosyl-tRNA synthetase [Rickettsia felis URRWXCal2]
          Length = 411

 Score =  405 bits (1041), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 186/409 (45%), Positives = 281/409 (68%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           F+     +G+ HQ ++   L  +  +  + AYIG+D TA+SLH G L Q+M+L  LQ+ G
Sbjct: 3   FIEEFINKGYFHQCTDLDRLTTITKETKIAAYIGFDCTATSLHIGSLMQIMILRLLQQHG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKPI ++GGGTS IGDP+++DE+R+++  ++I +N E IK   S FIK+G G++DA+ML+
Sbjct: 63  HKPIVIIGGGTSKIGDPTWKDEARKILSKEDIAKNAEGIKKSLSKFIKFGEGESDAIMLD 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL S+ Y+D LR+ GS+FSVNRML+ +SVR RL+REQ LSFLEFNYM+LQAYDF  L
Sbjct: 123 NAEWLDSLNYLDFLRDFGSYFSVNRMLTMDSVRLRLEREQHLSFLEFNYMLLQAYDFYYL 182

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
           +K+Y+C LQ+GGSDQWGNI+ G DL  ++    +F +T+PLLTT+SG KMGKT +GA+WL
Sbjct: 183 SKHYNCSLQLGGSDQWGNIVMGADLTRKISGKDVFGMTTPLLTTSSGAKMGKTAAGAVWL 242

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           N+++ SPY+++QYWRN +DAD+V FAK  + L   E+++   L  ++IN AKK +A E+T
Sbjct: 243 NEDLLSPYDYYQYWRNCEDADIVRFAKLYSELTQEELNKFESLAAEDINSAKKQLAYELT 302

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
            + H  + A+ A   A++ F+     +++P + + ++ +  G+    L  +AG A+S +E
Sbjct: 303 KLCHSEQAAKSALETAVKIFEEGQIDENLPIVVLEQEVLQAGISAYELFHEAGLASSKSE 362

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           AR+ ++    KIN+ ++ +E + I          IKLS GKK HI+  +
Sbjct: 363 ARKLIRGKGAKINDRLVEDENMIINTTFLLDKNVIKLSAGKKRHILVRV 411


>gi|296535640|ref|ZP_06897818.1| tyrosine--tRNA ligase [Roseomonas cervicalis ATCC 49957]
 gi|296264035|gb|EFH10482.1| tyrosine--tRNA ligase [Roseomonas cervicalis ATCC 49957]
          Length = 406

 Score =  405 bits (1040), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 201/408 (49%), Positives = 277/408 (67%), Gaps = 7/408 (1%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
            +FL +  ERG+IHQ+++   +     QG + AY+G+D TA SLH GHL  +MLL  LQK
Sbjct: 2   DEFLQVARERGYIHQVTDEAAMAARMKQGPLPAYVGFDCTADSLHVGHLLSIMLLRLLQK 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
           TGH+P++L+GGGT+ IGDPSFRD++R ++  ++I  N   I+  F +F+ +  G+  A+M
Sbjct: 62  TGHRPVALLGGGTTRIGDPSFRDDARPLLSDEQINVNKAGIRRTFDAFLDFAPGRG-AMM 120

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           L+N  WL  + YI  LR+IG  FSVNRML+ +SV+ RL+REQ LSFLEFNYM+LQ+YDF+
Sbjct: 121 LDNAEWLDQLLYIPFLRDIGRHFSVNRMLTMDSVKLRLEREQPLSFLEFNYMLLQSYDFL 180

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           EL + +   LQMGGSDQWGNII G++L  R    ++F LT+PLLTTASGTKMGKT  GA+
Sbjct: 181 ELRRRHGVGLQMGGSDQWGNIIMGVELNRRCDGAEVFGLTTPLLTTASGTKMGKTAGGAV 240

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
           WLN +  +PY +WQ+WRN +DADV  F    T LPM E+ R+  L G E+NEAKKI+ATE
Sbjct: 241 WLNPDRLAPYGYWQFWRNTEDADVGRFLALFTELPMEEVRRLGALGGAEVNEAKKILATE 300

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
            T ++HGRE AE AA  A   FD    +  +P+I+ S         ++ L V+AGFA S 
Sbjct: 301 ATALLHGREAAELAAETARRAFDEGQAADTLPSIAASLPAP-----VIDLAVQAGFAASK 355

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            EARR ++ N +++N+  I++E L +   D    G  KLS G+K H++
Sbjct: 356 GEARRLIRQNGLRLNDEAITDEALAVTEADL-RDGAAKLSAGRKRHVL 402


>gi|302383296|ref|YP_003819119.1| tyrosyl-tRNA synthetase [Brevundimonas subvibrioides ATCC 15264]
 gi|302193924|gb|ADL01496.1| tyrosyl-tRNA synthetase [Brevundimonas subvibrioides ATCC 15264]
          Length = 418

 Score =  405 bits (1040), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 197/413 (47%), Positives = 274/413 (66%), Gaps = 1/413 (0%)

Query: 3   AFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
           +F+SDFL  L  RG+IHQ+++P ELD     GVV  YIG+D TA SLH G L Q+M+L  
Sbjct: 5   SFQSDFLKTLQARGYIHQVTHPAELDAAAKAGVVAGYIGFDATAPSLHVGSLIQIMMLRR 64

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD 122
           LQ+ G +P+ +MGGGT+ +GDP+ +D SR  +  + IQ NI  IK +F  F+ +G G TD
Sbjct: 65  LQQAGGRPVVIMGGGTTKVGDPTGKDASRPQLTDETIQSNIASIKTVFEKFLVFGDGPTD 124

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
           A+M++N+ WL    Y++ LR+ G+ F+VNRML+F+SV+ RL+REQ ++FLEFNYM++Q+ 
Sbjct: 125 AVMIDNDEWLSKYGYVEFLRDYGTHFTVNRMLAFDSVKLRLEREQPMTFLEFNYMLMQSV 184

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DF+EL + ++  LQMGGSDQWGNI+ G+DL  R+     F LT+PLLTTASG KMGKT  
Sbjct: 185 DFLELNRRHNVTLQMGGSDQWGNIVSGVDLVRRVDHKAAFGLTTPLLTTASGGKMGKTAQ 244

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKII 302
           GA+WLN E  SPY++WQ+WRN +DADV  F K  T LP+ E+ R   LQG +INEAKK +
Sbjct: 245 GAVWLNAEQLSPYDYWQFWRNAEDADVGKFMKLFTDLPLEEVARFEALQGADINEAKKAL 304

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFA 362
           A   TT++HG E A  A  AA   F+    S  +PTI +   EV   M L  +  +AG  
Sbjct: 305 ADAATTLLHGAEAAAAARAAAEGAFERGTLSTDLPTIDLPSGEVIGAM-LAAVATRAGLT 363

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            S  EARR  +   +++N+  I++    I+  D ++ G IKL+ GKK  ++  
Sbjct: 364 ASNGEARRLAQGGGLRLNDEAIADGARLIEASDVNADGVIKLAAGKKKLMLVR 416


>gi|91205726|ref|YP_538081.1| tyrosyl-tRNA synthetase [Rickettsia bellii RML369-C]
 gi|122425472|sp|Q1RI22|SYY_RICBR RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|91069270|gb|ABE04992.1| Tyrosyl-tRNA synthetase [Rickettsia bellii RML369-C]
          Length = 411

 Score =  404 bits (1039), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 191/409 (46%), Positives = 279/409 (68%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           F+     +G+ HQ ++   L  +  +  + AYIG+D TA+SLH G L Q+M+L  LQK G
Sbjct: 3   FIEEFINKGYFHQCTDLERLTSITKESKIAAYIGFDCTATSLHIGSLMQIMILRLLQKHG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKPI ++GGGTS IGDPS +DE+R+ +  ++I  N E IK   S FIK+G G++DA+ML+
Sbjct: 63  HKPIVIIGGGTSKIGDPSGKDEARKTITKEDIARNAEGIKKSLSKFIKFGDGESDAIMLD 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL S+ Y+D LR+ GS FSVNRML+ +SV+ RL+REQ LSFLEFNYM+LQAYDF  L
Sbjct: 123 NAEWLDSLYYLDFLRDFGSHFSVNRMLTMDSVKLRLEREQHLSFLEFNYMLLQAYDFYYL 182

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
           +K+Y+C LQ+GGSDQWGNI+ G DL  ++ + ++F +T+PLLTTASG KMGKT +GA+WL
Sbjct: 183 SKHYNCSLQLGGSDQWGNIVMGADLTRKISSKEVFGMTTPLLTTASGAKMGKTAAGAVWL 242

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           N+++ SPY+++QYWRN +DAD+V FAK  + L   E+     L  ++IN AKK +A E+T
Sbjct: 243 NEDLLSPYDYYQYWRNCEDADIVRFAKLYSELTNEELVVFENLAAEDINAAKKQLAYELT 302

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
            + HG++EA+ A   +++ F+     +++ TI +  + +  G+    L  +AG ATS +E
Sbjct: 303 KLCHGKQEAKNALETSVKIFEQGQIDENLTTIVLEPEMLQAGITAFELFHEAGLATSKSE 362

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           AR+ ++    K+N+ +I +E + I          IKLS GKK HI+  +
Sbjct: 363 ARKLIRGKGAKVNDQLIEDENMVINTTFLLDNKVIKLSAGKKRHILVKI 411


>gi|162148158|ref|YP_001602619.1| tyrosyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5]
 gi|161786735|emb|CAP56318.1| putative tyrosyl-tRNA synthetase [Gluconacetobacter diazotrophicus
           PAl 5]
          Length = 413

 Score =  404 bits (1038), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 205/415 (49%), Positives = 274/415 (66%), Gaps = 4/415 (0%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           MP  KS+FL     RGFI Q ++   LD     G V  YIG+D TA SLH G L Q+M+L
Sbjct: 1   MP--KSEFLQEAEARGFIFQCTDIDALDAALQAGPVAGYIGFDPTADSLHVGSLIQIMML 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             +QK GH+P++LMGGGT+ IGDPSFR+E+R++M  + I  N+  I+G    F+++  G 
Sbjct: 59  RLMQKHGHRPVALMGGGTAKIGDPSFREEARQLMTDETIAANLRGIEGCLRQFLQF-DGA 117

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
             A + NN  WL  + YIDLLR++G  FSVNRML+F+SVRSRL+REQ L+FLEFNY ILQ
Sbjct: 118 AGARLANNADWLDRLSYIDLLRDVGVHFSVNRMLAFDSVRSRLEREQGLTFLEFNYSILQ 177

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           +YDF EL++     LQMGGSDQWGNI+ GIDL  R    ++F LT+PLLTTASG KMGK+
Sbjct: 178 SYDFRELSRTQGVTLQMGGSDQWGNIVSGIDLVRRTDQKQVFGLTTPLLTTASGAKMGKS 237

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
             GAIWL+      + +WQ+WRN+DDADV  F +  T LP++E DR+A L G EINEAKK
Sbjct: 238 ARGAIWLSASRLPIFEYWQFWRNVDDADVGRFLRLFTDLPIAECDRLAALGGTEINEAKK 297

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           ++ATE T + HGR EA+ AA AA   F+       +P  +I+ D ++ G+    L V++G
Sbjct: 298 VLATEATALCHGRAEADAAAEAARRTFEDGAAPAALPGTTIAADLLAAGIPAFRLFVESG 357

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            A S  EARR ++    +IN+  + +E   I   D  + G IKLS G+K+HI+  
Sbjct: 358 MAASNGEARRLIRGGGARINDVAVQDEGQVITTTDL-ADGAIKLSSGRKHHILVR 411


>gi|68171326|ref|ZP_00544724.1| Tyrosyl-tRNA synthetase, class Ib [Ehrlichia chaffeensis str.
           Sapulpa]
 gi|88658503|ref|YP_506920.1| tyrosyl-tRNA synthetase [Ehrlichia chaffeensis str. Arkansas]
 gi|123493977|sp|Q2GI13|SYY_EHRCR RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|67999253|gb|EAM85905.1| Tyrosyl-tRNA synthetase, class Ib [Ehrlichia chaffeensis str.
           Sapulpa]
 gi|88599960|gb|ABD45429.1| tyrosyl-tRNA synthetase [Ehrlichia chaffeensis str. Arkansas]
          Length = 418

 Score =  404 bits (1037), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 200/409 (48%), Positives = 275/409 (67%), Gaps = 1/409 (0%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
            +S FLS L  RG+  Q +N   LD L SQ  V AYIG+D TA SLH G L Q+M+L  L
Sbjct: 3   LESQFLSFLYSRGYCSQCTNISMLDQLMSQQCVHAYIGFDCTAKSLHVGSLIQVMILRHL 62

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           QK GHKPI L+G GT+ IGDPS +D+SR M+ + EI+EN   I  +   FI +G G  DA
Sbjct: 63  QKFGHKPIILLGDGTTKIGDPSGKDKSRAMLSASEIEENALGIYEVLKKFIVFGDGPHDA 122

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           L++ N  WL  + YI+ LR+IG  FSVN ML+F+SVR RL+REQ+LSFLEFNYM+LQ+YD
Sbjct: 123 LLVRNAEWLNGLNYIEFLRDIGKHFSVNNMLTFDSVRLRLEREQNLSFLEFNYMLLQSYD 182

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           FVEL + Y+C LQ+GGSDQWGNI+ G++LG +L+ P+LF LT+ LL T+SG KMGKT  G
Sbjct: 183 FVELNRRYNCLLQIGGSDQWGNIVSGVELGRKLRLPELFGLTTNLLLTSSGEKMGKTAQG 242

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIA 303
           A+WL+  M SP ++WQY+RN+ D DV  F +  T L ++EI  +  LQG EINE+KKI+A
Sbjct: 243 AVWLDGNMYSPVDYWQYFRNVKDEDVGRFLRLFTELSLNEIRNLELLQGHEINESKKILA 302

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
           TE T + HG E A+  A  A++ F+ +  S  +    + K +V  G+ ++ L+       
Sbjct: 303 TEATRICHGEEIAQSVANDALKVFECNDDSG-LSVFYVKKYDVELGLPIIKLLQMCEMEK 361

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           S++ ARR +     KIN+ ++ +   ++ L+DF +T  +KLS GKK H+
Sbjct: 362 SSSSARRLINDKGCKINDVVVLDMNYKLSLKDFYNTSYVKLSCGKKRHL 410


>gi|157803618|ref|YP_001492167.1| tyrosyl-tRNA synthetase [Rickettsia canadensis str. McKiel]
 gi|189029763|sp|A8EYE9|SYY_RICCK RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|157784881|gb|ABV73382.1| tyrosyl-tRNA synthetase [Rickettsia canadensis str. McKiel]
          Length = 411

 Score =  403 bits (1035), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 189/409 (46%), Positives = 278/409 (67%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           F+     +G+ HQ +N   L  +  +  + AYIG+D TA+SLH G L Q+M+L  LQ+ G
Sbjct: 3   FIKEFRNKGYFHQCTNLDRLTSITKETKIAAYIGFDCTATSLHIGSLMQIMILRLLQQHG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKPI ++GGGTS IGDP+++DE+R+++  +EI +N E IK   S FIK+G   +DA+ML+
Sbjct: 63  HKPIVIIGGGTSKIGDPTWKDEARKILSKEEIAKNAEGIKKSLSKFIKFGEESSDAIMLD 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL S+ Y+D LR+ GS+FSVNRML+ +SVR RL+REQ LSFLEFNYM+LQAYDF  L
Sbjct: 123 NSEWLDSLNYLDFLRDFGSYFSVNRMLTMDSVRLRLEREQHLSFLEFNYMLLQAYDFYYL 182

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
           +K Y+C LQ+GGSDQWGNI+ G+DL  ++ + ++F +T+PLLTT+SG KMGKT +GA+WL
Sbjct: 183 SKYYNCSLQLGGSDQWGNIVIGVDLIRKISSKEVFGMTTPLLTTSSGAKMGKTAAGAVWL 242

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           N+++ SPY+++QYWRN +DADV+ FAK  + L   E  +   L  ++IN AKK +A E+T
Sbjct: 243 NEDLLSPYDYYQYWRNCEDADVIRFAKLFSELNTKEFTKFENLVAEDINAAKKQLAYELT 302

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
            + H  + A+ A   A++ F+     +++ T+ +  + +  G+    L  +AG ATS +E
Sbjct: 303 KLCHSEQAAKSALETAVKIFEQGEIDENLHTVVLELEILQAGINAYELFHEAGLATSKSE 362

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           AR+ ++    KIN+ +I +E + I          IKLS GKK HI+  +
Sbjct: 363 ARKLIRGKGAKINDKLIEDENMIINTNFLLDKSVIKLSAGKKRHILVRI 411


>gi|209542797|ref|YP_002275026.1| tyrosyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5]
 gi|209530474|gb|ACI50411.1| tyrosyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5]
          Length = 413

 Score =  402 bits (1034), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 204/415 (49%), Positives = 273/415 (65%), Gaps = 4/415 (0%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           MP  KS+FL     RGFI Q ++   LD     G    YIG+D TA SLH G L Q+M+L
Sbjct: 1   MP--KSEFLQEAEARGFIFQCTDIDALDAALQAGPAAGYIGFDPTADSLHVGSLIQIMML 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             +QK GH+P++LMGGGT+ IGDPSFR+E+R++M  + I  N+  I+G    F+++  G 
Sbjct: 59  RLMQKHGHRPVALMGGGTAKIGDPSFREEARQLMTDETIAANLRGIEGCLRQFLQF-DGA 117

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
             A + NN  WL  + YIDLLR++G  FSVNRML+F+SVRSRL+REQ L+FLEFNY ILQ
Sbjct: 118 AGARLANNADWLDRLSYIDLLRDVGVHFSVNRMLAFDSVRSRLEREQGLTFLEFNYSILQ 177

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           +YDF EL++     LQMGGSDQWGNI+ GIDL  R    ++F LT+PLLTTASG KMGK+
Sbjct: 178 SYDFRELSRTQGVTLQMGGSDQWGNIVSGIDLVRRTDQKQVFGLTTPLLTTASGAKMGKS 237

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
             GAIWL+      + +WQ+WRN+DDADV  F +  T LP++E DR+A L G EINEAKK
Sbjct: 238 ARGAIWLSASRLPIFEYWQFWRNVDDADVGRFLRLFTDLPIAECDRLAALGGTEINEAKK 297

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           ++ATE T + HGR EA+ AA AA   F+       +P  +I+ D ++ G+    L V++G
Sbjct: 298 VLATEATALCHGRAEADAAAEAARRTFEDGAAPAALPGTTIAADLLAAGIPAFRLFVESG 357

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            A S  EARR ++    +IN+  + +E   I   D  + G IKLS G+K+HI+  
Sbjct: 358 MAASNGEARRLIRGGGARINDVAVQDEGQVITTTDL-ADGAIKLSSGRKHHILVR 411


>gi|329848845|ref|ZP_08263873.1| tyrosyl-tRNA synthetase [Asticcacaulis biprosthecum C19]
 gi|328843908|gb|EGF93477.1| tyrosyl-tRNA synthetase [Asticcacaulis biprosthecum C19]
          Length = 433

 Score =  402 bits (1034), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 196/412 (47%), Positives = 275/412 (66%), Gaps = 10/412 (2%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           F +  L+ L+ RGFIHQ +    +      G+V  Y G+D TA SLH GHL  +MLL  L
Sbjct: 29  FMNALLTTLTRRGFIHQCTQTDGVTDAFRSGIVPVYAGFDATADSLHVGHLLPIMLLRRL 88

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q+ GHKPI L+GGGT+ IGDPSFR +SR M+   +I  NI  I+G+F  F+ +G G TDA
Sbjct: 89  QRAGHKPIVLIGGGTTRIGDPSFRSDSRPMLTDAQIATNIAGIRGVFERFLAFGDGATDA 148

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           +++NN  WL  + YID+LR++G  FSVNRMLSF+SV+SRL+R++SLSFLEFNYMILQAYD
Sbjct: 149 ILVNNADWLDRLGYIDMLRDVGPHFSVNRMLSFDSVKSRLERQESLSFLEFNYMILQAYD 208

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+EL + Y CRLQ+GG+DQWGNI+ GIDL  R+   ++F LT+PLLTTASG KMGKT +G
Sbjct: 209 FLELNRRYGCRLQIGGADQWGNIVSGIDLVRRMAGEEVFGLTAPLLTTASGAKMGKTAAG 268

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIA 303
           A+WLN +  SPY++WQ+WRN +D DV  F +  T L  ++I  +  L+G +IN AK ++A
Sbjct: 269 AVWLNGDRLSPYDYWQFWRNSEDRDVGRFLRLFTDLDEADIVHLESLEGADINAAKTVLA 328

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
            E T + HG +   +AA AA   F        +P I     EVS  + ++ L+V+AG  +
Sbjct: 329 DEATRLAHGEDARMRAAEAAAGAFGDGESLNGLPVI-----EVSGSVTVVDLLVQAGLVS 383

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           S +EARR + +   ++++ ++ +E   I + D      +KLS G+K H++  
Sbjct: 384 SKSEARRLIANRGARLDDEVVEDEGAVITVND-----PLKLSAGRKKHVLIR 430


>gi|85374010|ref|YP_458072.1| tyrosyl-tRNA synthetase [Erythrobacter litoralis HTCC2594]
 gi|84787093|gb|ABC63275.1| tyrosyl-tRNA synthetase [Erythrobacter litoralis HTCC2594]
          Length = 409

 Score =  400 bits (1027), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 188/411 (45%), Positives = 273/411 (66%), Gaps = 7/411 (1%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  F+SD L +LSERG +HQI++   LD L  + VVT Y+G+D TA SLH G+L  +MLL
Sbjct: 1   MSEFESDLLQLLSERGHLHQITDAGALDALAMKEVVTGYVGFDPTAPSLHIGNLASIMLL 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             LQ+ GH+PI +MGGGT+ +GDPS RDE+R M+  +++  NI  IKG F   +++   +
Sbjct: 61  KRLQQAGHRPIVIMGGGTAKVGDPSGRDETRTMLTDEKLAGNIASIKGSFEQILRFDDSE 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           T AL++NN+ WL  + YI+LLR++G  F++NRML+F+SV+ RL REQ L+FLEFNYMI+Q
Sbjct: 121 TGALLINNDDWLNELGYIELLRDVGPHFTINRMLTFDSVKLRLDREQPLTFLEFNYMIMQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYD++ L + Y CRLQ+GGSDQWGNI+ GI+L  R+   +++ +T+PL+T A G KMGK+
Sbjct: 181 AYDYLVLNREYGCRLQLGGSDQWGNIVNGIELCRRIDGKEVYGVTAPLITRADGAKMGKS 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           + GA+WLN+     Y+FWQYWRN DD DV  F +  T LP+ EI R+ +L+G  IN+AK 
Sbjct: 241 VDGAVWLNEAQLPAYDFWQYWRNTDDRDVGRFLRLFTDLPLDEIARLEQLEGAAINDAKI 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           ++A E+T MV G + A  A   A + F      + +PT+++ ++E+S    L  ++   G
Sbjct: 301 VLANEVTAMVRGADAARSAEATAAQTFAGGGAGEDLPTLTLGEEEMS----LPAVLTAIG 356

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           F  S  EA+R +   A+K++     +    I L +      IK+S GKK H
Sbjct: 357 FTRSNGEAKRKIAEGAVKLDGEATRDPGAMIALAE---GAEIKISLGKKRH 404


>gi|254503054|ref|ZP_05115205.1| tyrosyl-tRNA synthetase [Labrenzia alexandrii DFL-11]
 gi|222439125|gb|EEE45804.1| tyrosyl-tRNA synthetase [Labrenzia alexandrii DFL-11]
          Length = 425

 Score =  399 bits (1025), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 189/406 (46%), Positives = 274/406 (67%), Gaps = 3/406 (0%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
            KS+ L++L ERG +HQ ++   LD   + G +TAY G+D TA+SLH GHL  LM L WL
Sbjct: 15  LKSEALAVLLERGLVHQSTDLEALDKRLNDGPITAYAGFDATAASLHVGHLMPLMTLRWL 74

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q+ GH+PI ++GGGTS +GDPSFR+++R ++  ++I  N+  I+      +    G   A
Sbjct: 75  QRLGHRPIVVLGGGTSQVGDPSFRNDARPLLEERQIAANMATIRRSVERLVDM-DGTEGA 133

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           L+++N  WL   ++++ LR+ GS F+VNRM++F+SV+SRL  +  L+ LEF YM+LQA D
Sbjct: 134 LLVDNAEWLNEFRFLEFLRDYGSQFTVNRMMTFDSVKSRLDAQMPLTILEFCYMMLQAVD 193

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ELAK +DC LQ+GGSDQWGNI+ G++LG R    KL  LT PLLTTA+G+KMGKT SG
Sbjct: 194 FLELAKRHDCVLQVGGSDQWGNIVNGVELGRR-DGRKLHGLTVPLLTTANGSKMGKTASG 252

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIA 303
           A+WL+ E  SP+ FWQ+WRN  DADV  F +  T LPM E++R+++LQG E+NEAKKI+A
Sbjct: 253 AVWLHPEHLSPFGFWQFWRNTADADVGKFLRLFTELPMREVERLSELQGAELNEAKKILA 312

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
           T++T +VHG EEA  A       F         PT +++   ++ G+GLL L+V +GFA 
Sbjct: 313 TQVTAIVHGPEEARVALEQGDALFSGDAELTE-PTHTMALSVLAEGVGLLELVVASGFAA 371

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
           S  EARR ++   +++NN ++ + + +I   D  +   + LS GK+
Sbjct: 372 SNGEARRLVEGGGVRLNNRVVDDARRRISSGDLGANDRLSLSVGKR 417


>gi|219118843|ref|XP_002180188.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217408445|gb|EEC48379.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 488

 Score =  399 bits (1024), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 190/419 (45%), Positives = 276/419 (65%), Gaps = 3/419 (0%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           +   +S+FL  + +RGF+HQ +N R+LD    +G   AY+G+D TA SLH G L Q+M+L
Sbjct: 68  LETLQSEFLQTMRDRGFLHQCTNIRDLDAKLCEGPQAAYLGFDATADSLHVGSLLQIMIL 127

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             LQ++GH+P+ L+GGGTS +GDP+ +DESR ++  + IQ+N + I  +F  F+ +G  K
Sbjct: 128 RHLQRSGHRPVVLIGGGTSKVGDPTGKDESRVLLTDEIIQQNTDGISKVFQQFLTFGDEK 187

Query: 121 -TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
            TDA+M+NN+ WL  IKY+D LR  G+ F++NRMLSFESV+ RL RE   SFLEFNYMIL
Sbjct: 188 PTDAIMVNNDEWLSEIKYLDFLRTYGTHFTINRMLSFESVKQRLTREAPFSFLEFNYMIL 247

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK 239
           QAYDF+EL + +   LQ+GGSDQWGN+I G +LG +L++ +LFALT+PL+TT+ G KMGK
Sbjct: 248 QAYDFLELYRRHKTILQLGGSDQWGNMISGTELGRKLESAQLFALTAPLITTSDGKKMGK 307

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAK 299
           T +GA+WLN    S Y++WQ+WRN DDADV+ F K  T LP+ ++  + KLQG EIN+AK
Sbjct: 308 TANGAVWLNAARLSSYDYWQFWRNTDDADVIRFLKLFTELPLDKVAELEKLQGAEINQAK 367

Query: 300 KIIATEITTMVHGREEAEKAATAAMECF-DMSIHSQHMPTISISKDEV-SRGMGLLTLIV 357
            ++A E T ++HG +  E         F      ++ +P +  SK ++ + G+  L L+V
Sbjct: 368 IVLADEATALLHGSDSLEAIHKTIETMFAGGGSDTESLPRVYASKTDLETNGVRFLDLLV 427

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           K   A S  EARR ++    ++  + I++E   + L DF     + L  GKK   +  +
Sbjct: 428 KLKLANSKKEARRLIQGGGARLGETPIADENGVLILTDFGGATEVTLRAGKKRAGVVEI 486


>gi|254293802|ref|YP_003059825.1| tyrosyl-tRNA synthetase [Hirschia baltica ATCC 49814]
 gi|254042333|gb|ACT59128.1| tyrosyl-tRNA synthetase [Hirschia baltica ATCC 49814]
          Length = 421

 Score =  395 bits (1015), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 190/411 (46%), Positives = 271/411 (65%), Gaps = 2/411 (0%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           MP  +S+ L  L ERG+++QI++   LD      +  AY GYD TASSLH GHL  +M+L
Sbjct: 7   MP--QSELLRTLFERGYVYQITDEAGLDEYAKSEMPIAYAGYDATASSLHVGHLVSIMML 64

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             LQ+ G KPI LMGGGT+ IGDP+ +++SR ++  +EIQ+NI  IK +F  F+ +G G 
Sbjct: 65  RRLQQAGGKPIVLMGGGTTKIGDPTDKEKSRPILTEEEIQKNINGIKSVFEKFLTFGDGP 124

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           TDA+M+NN+ WL  I Y++ LR+ G  F++N+M+  ++V+ RL+ EQ  +FLEFNY +LQ
Sbjct: 125 TDAVMVNNDDWLGKINYLEFLRDYGKLFTINKMIMQDTVKRRLENEQPYTFLEFNYALLQ 184

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVEL +    RLQ+GGSDQWGNI  G +L  R++  + F  T+PLLTTASG KMGKT
Sbjct: 185 AYDFVELNRRLKVRLQLGGSDQWGNITNGTELCRRVENVQAFGFTTPLLTTASGVKMGKT 244

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           + GA+WLN ++ SPY++WQ+WRN +DADV  F K  T LP+ +I  +  L+G +IN+AK 
Sbjct: 245 VGGAVWLNADLKSPYDYWQFWRNTEDADVGKFLKLFTDLPLDKIAELESLKGAQINDAKI 304

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
            +A   T+M+HG E A++A  AA + F     +  MP+  ++  E+  G  ++   V +G
Sbjct: 305 ALADAATSMLHGEEAAKEANAAAAKVFAEGATADGMPSFDVAMSEIESGYSVIDGFVASG 364

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
            A S  E RRH+K+ A K+N   I++E   I   D +S    +LS GKK H
Sbjct: 365 LAKSKGEVRRHIKAGAAKLNGETITDELATIGTADLESDNTARLSIGKKRH 415


>gi|118590759|ref|ZP_01548160.1| Tyrosyl-tRNA synthetase, class Ib [Stappia aggregata IAM 12614]
 gi|118436735|gb|EAV43375.1| Tyrosyl-tRNA synthetase, class Ib [Stappia aggregata IAM 12614]
          Length = 425

 Score =  394 bits (1012), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 198/407 (48%), Positives = 275/407 (67%), Gaps = 5/407 (1%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
            KS+ L++L ERG +HQ ++   LD   SQG +TAY G+D TA+SLH GHL  LM + WL
Sbjct: 15  LKSEALAVLLERGLVHQCTDIEALDQTLSQGPITAYAGFDATAASLHVGHLMPLMTMRWL 74

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           QK GH+PI ++GGGTS IGDPSFR ++R M+  ++I  NI  I+      +    G+  A
Sbjct: 75  QKLGHRPIVVLGGGTSQIGDPSFRKDARPMLEERQIAANIATIRRSVERLVDM-NGEDGA 133

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           L+++N  WL   ++++ LR+ GS F+VNRM++F+SV+SRL  +  L+ LEF YM+LQA D
Sbjct: 134 LLVDNAEWLNEFRFLEFLRDYGSQFTVNRMMTFDSVKSRLDAQMPLTVLEFCYMMLQAVD 193

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ELAK YDC LQ+GGSDQWGNI+ G++LG R    KL  LT PLLTTASG KMGKT +G
Sbjct: 194 FLELAKRYDCSLQVGGSDQWGNIVNGVELGRR-DGRKLHGLTVPLLTTASGAKMGKTAAG 252

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIA 303
           A+WL+ E  SP+ FWQ+WRN  DADV    +  T LPMSEI+R+A L+G E+NEAKKI+A
Sbjct: 253 AVWLHPEHLSPFGFWQFWRNTADADVAKCLRLFTELPMSEIERLAALEGAELNEAKKILA 312

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHM-PTISISKDEVSRGMGLLTLIVKAGFA 362
           T++T +VHG EEA  A       F  S   + + PT S+    ++ G+GLL L+V  GFA
Sbjct: 313 TQVTAIVHGPEEARGALQQGDALF--SGEGEILEPTHSLPLKTLAEGLGLLELVVAVGFA 370

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
           +S  EARR ++   +++NN I+ + + +I   D  +   + +S GK+
Sbjct: 371 SSNGEARRLVEGGGVRLNNQILDDPRRRIATGDLQANDRLSISVGKR 417


>gi|157825880|ref|YP_001493600.1| tyrosyl-tRNA synthetase [Rickettsia akari str. Hartford]
 gi|189029762|sp|A8GNW7|SYY_RICAH RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|157799838|gb|ABV75092.1| tyrosyl-tRNA synthetase [Rickettsia akari str. Hartford]
          Length = 411

 Score =  393 bits (1010), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 181/409 (44%), Positives = 276/409 (67%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           F+     +G+ HQ ++   L  +  +  + AYIG+D TA+SLH G L Q+M+L  LQ+ G
Sbjct: 3   FIEEFINKGYFHQCTDLDRLTTITKETKIAAYIGFDCTATSLHIGSLMQIMILRLLQRHG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKPI ++GGGTS IGDP+++DE+R+++  ++I +N + IK   S FIK+G GK+DA+M +
Sbjct: 63  HKPIVIIGGGTSKIGDPTWKDEARKILSKEDIAKNAKGIKKSLSKFIKFGDGKSDAIMFD 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL S+ Y++ LR+ G  FS+NRML+ +SV+ RL+REQ LSFLEFNYM+LQAYDF  L
Sbjct: 123 NVEWLDSLNYLEFLRDFGVHFSINRMLTMDSVKLRLEREQHLSFLEFNYMLLQAYDFYYL 182

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
           +K+Y+C LQ+GGSDQWGNI+ G DL  ++   ++F +T+PLLTT+SG KMGKT +GA+WL
Sbjct: 183 SKHYNCSLQLGGSDQWGNIVMGADLIRKISRKEVFGMTTPLLTTSSGAKMGKTAAGAVWL 242

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           N+++ SPY+++QYWRN +DADV+ FAK  + L   E++   +L  ++IN AKK +A E+T
Sbjct: 243 NEDLLSPYDYYQYWRNCEDADVIRFAKLYSELTSEELNEFERLAAEDINAAKKKLAYELT 302

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
            + H  + A+ A   A++ F+     + +PT+ + +  +  G+    L    G A+S +E
Sbjct: 303 KLCHSEQAAKSALETAVKIFEQGEIDESLPTVVLEQALLQTGISAYELFHDVGLASSKSE 362

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           AR+ ++    KIN+ ++ +E + I          IKLS GKK HI+  +
Sbjct: 363 ARKLIRGKGAKINDKLVEDENIIINTTFLLDKNAIKLSAGKKRHILVRV 411


>gi|254471831|ref|ZP_05085232.1| tyrosyl-tRNA synthetase [Pseudovibrio sp. JE062]
 gi|211959033|gb|EEA94232.1| tyrosyl-tRNA synthetase [Pseudovibrio sp. JE062]
          Length = 423

 Score =  392 bits (1008), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 194/413 (46%), Positives = 267/413 (64%), Gaps = 4/413 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KS+ L +L +RGF+HQ ++   LD     G +TAY G+D TA SLH GHL  LM + WLQ
Sbjct: 15  KSEALQLLIDRGFLHQCTDLEALDEKLQAGPITAYAGFDATADSLHVGHLLPLMAMRWLQ 74

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           KTGHKPI L+GGGT+ +GDPSFR ESR ++   +I  N+  I+           G+    
Sbjct: 75  KTGHKPILLIGGGTTRVGDPSFRSESRPLLDDAQISHNLAGIRATVERLFDLSEGQGQ-- 132

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           ++NN  WL   ++++ LR+ G+ F+VNRM++F+SVRSRL+ +Q LS LEF YM+LQA DF
Sbjct: 133 IVNNAEWLDEFRFLEFLRDFGTHFTVNRMMTFDSVRSRLEAQQPLSVLEFCYMMLQAVDF 192

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           VEL + +DC LQ+GGSDQWGNI+ G+DLG R    +LF  T PLLTTASG+KMGKT  GA
Sbjct: 193 VELNQRFDCTLQIGGSDQWGNIVNGVDLGRR-SGSQLFGFTLPLLTTASGSKMGKTAEGA 251

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WLN    S + FWQ+WRN+DDADV  F K  T LP+ EIDR++ L+G+E+NEAKKI+AT
Sbjct: 252 VWLNPSRLSSFGFWQFWRNVDDADVPRFLKLFTDLPLGEIDRLSTLKGQELNEAKKILAT 311

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           ++T +VHG   AE A       F+        PT  +    +++ +GLL L+VK GFAT+
Sbjct: 312 QVTGIVHGLAAAEAALQQGEALFNGQ-EDLTEPTHELPLSLLAKPLGLLDLLVKTGFATT 370

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            +EARR ++   +++N SI+  E   I   D      + L+ GK+   +    
Sbjct: 371 NSEARRLIRGGGVRLNTSIVLEETRMISEGDLKPGERLTLAVGKRRKALVEFV 423


>gi|114569858|ref|YP_756538.1| tyrosyl-tRNA synthetase [Maricaulis maris MCS10]
 gi|114340320|gb|ABI65600.1| tyrosyl-tRNA synthetase [Maricaulis maris MCS10]
          Length = 415

 Score =  391 bits (1005), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 192/417 (46%), Positives = 269/417 (64%), Gaps = 8/417 (1%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  +KS  +  L ERG+++Q ++   LD     GVVT YIG+D TA+SLH G L Q+M+L
Sbjct: 1   MSDYKSQLVRDLVERGYLNQATDIEGLDQAALDGVVTGYIGFDATATSLHVGSLVQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             +Q+ GHKPI LMGGGT+ IGDPS +D+SR M+  + I  NI+ I   F   ++ G G 
Sbjct: 61  RRIQQAGHKPIILMGGGTTKIGDPSGKDKSRSMLTDEAIDANIDGILQAFRPLVQIGDGP 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           TDA+++NN+ WL    YI+ LR+ G  F++NRM++F+SV+ RL REQ L+FLEFNYM+LQ
Sbjct: 121 TDAVLVNNDEWLSEFGYIEFLRKFGPHFTINRMMTFDSVKLRLDREQPLTFLEFNYMLLQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           A DF+EL + Y C LQ+GG DQWGNII G++L  R+   +++  T+PL+TT+SG KMGKT
Sbjct: 181 AVDFLELNRRYGCTLQLGGGDQWGNIINGVELCRRVDQKEVYGFTTPLITTSSGAKMGKT 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
             GA+WLN +M S Y +WQ+WRN +DADV  F +  T LP++EI R+  L+G EIN+AK 
Sbjct: 241 ADGAVWLNADMRSAYEYWQFWRNTEDADVGRFLRLFTDLPLAEIARLEALEGAEINDAKI 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI---SISKDEVSRGMGLLTLIV 357
            +A E T ++HG E A  A   A + F        +PT+    +   EV+    L++L V
Sbjct: 301 RLANEATGLLHGAEAASAAEATARQTFAQGGSGAALPTVEFEGLDSGEVT----LMSLFV 356

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            A  A S  E RRH+K+ A K+N+ ++++        D    G IKLS GKK H + 
Sbjct: 357 AAELAASNGEMRRHIKAGAAKVNDQVLTDPFAMASADDV-VDGAIKLSIGKKRHALA 412


>gi|296114834|ref|ZP_06833482.1| tyrosyl-tRNA synthetase [Gluconacetobacter hansenii ATCC 23769]
 gi|295978540|gb|EFG85270.1| tyrosyl-tRNA synthetase [Gluconacetobacter hansenii ATCC 23769]
          Length = 420

 Score =  391 bits (1004), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 200/420 (47%), Positives = 276/420 (65%), Gaps = 9/420 (2%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           MP  KS+FL     RGFI Q ++   LD       V+ YIG+D TA SLH G L Q+M+L
Sbjct: 1   MP--KSEFLREAEARGFIFQCTDMEALDAAMQARPVSGYIGFDPTADSLHVGSLIQIMML 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY---- 116
             LQK GH+P++L+GGGT+ IGDPSFR+E+R++M ++ I +N+  I+G    F+ +    
Sbjct: 59  RLLQKHGHRPVALVGGGTAKIGDPSFREEARQLMTAETIAQNLRGIEGCLRQFLSFDDKS 118

Query: 117 -GTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFN 175
               K+ A++ NN  WL  + YIDLLR++G  FS+NRMLSF+SVRSRL+REQ L+FLEFN
Sbjct: 119 SAKDKSGAILANNADWLDRLSYIDLLRDVGVHFSINRMLSFDSVRSRLEREQGLTFLEFN 178

Query: 176 YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT 235
           Y ILQ+YDF EL   +   LQMGGSDQWGNI+ GIDL  R+   ++F LT+PLLTT+SGT
Sbjct: 179 YSILQSYDFRELNARHGVTLQMGGSDQWGNIVSGIDLVRRMNQQQVFGLTTPLLTTSSGT 238

Query: 236 KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI 295
           KMGK+  GA+WL+      + +WQ+WRN +DADV  F +  T LP+ E DR+A L G  I
Sbjct: 239 KMGKSARGAVWLSAARLPVFEYWQFWRNTEDADVGRFLRLFTDLPVEECDRLAALPGAGI 298

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDM-SIHSQHMPTISISKDEVSRGMGLLT 354
           NEAKK++ATE T + HGR  AE+AA AA   F+  ++ ++ +P+ISI+   +  G+    
Sbjct: 299 NEAKKVLATEATALCHGRAAAEQAAEAARRTFEEGALSAEALPSISIAAATLHEGIPAFR 358

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           L   +G   S  EARR ++    ++N+ ++++E   I   D    G IKLS GKK HI+ 
Sbjct: 359 LFADSGLVASNGEARRLIRGGGARLNDEVVTDEGRMIGEGDLHD-GVIKLSSGKKKHILV 417


>gi|88607296|ref|YP_505770.1| tyrosyl-tRNA synthetase [Anaplasma phagocytophilum HZ]
 gi|123494296|sp|Q2GIN1|SYY_ANAPZ RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|88598359|gb|ABD43829.1| tyrosyl-tRNA synthetase [Anaplasma phagocytophilum HZ]
          Length = 412

 Score =  388 bits (997), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 188/410 (45%), Positives = 273/410 (66%), Gaps = 7/410 (1%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           F S+FL+ L  RG++HQ+++   LD + S G VTAYIG+D TA+SLH G L Q+MLL +L
Sbjct: 3   FNSEFLATLCARGYLHQLTDATALDGIMSSGAVTAYIGFDCTANSLHIGSLMQIMLLRYL 62

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q+ GHKPI L+GG T+ +GDPS ++++R M+    I  N E I  +   F+       D 
Sbjct: 63  QRFGHKPIVLLGGATTKVGDPSGKEKTRAMLSEDNISANKEGILRVIKKFLS-----EDV 117

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           ++++N  WL +  Y+D LREIGS FSVN ML  ESV+SRL R+Q LSFLEF+Y++LQ+YD
Sbjct: 118 VVVDNAEWLGNYGYLDFLREIGSKFSVNVMLGLESVKSRLSRDQQLSFLEFSYVLLQSYD 177

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           FVEL K Y C LQ+GGSDQWGNI+ GIDL  ++  P+L+ +T+PLL  +SG KMGKT  G
Sbjct: 178 FVELHKRYGCILQIGGSDQWGNIVSGIDLARKMGCPQLYGVTTPLLLNSSGAKMGKTADG 237

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIA 303
           AIWL++ + SPYN+WQY+RN+ D DV    +  T LP+SEI+R+  L+G+E+NEAKKI+A
Sbjct: 238 AIWLDETLYSPYNYWQYFRNVPDQDVGRLLRLFTELPLSEIERLEALKGEELNEAKKILA 297

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
           T +T++ HG E A +    A++ F+ + H + + +I+ S+  + +G+ +  L+   G   
Sbjct: 298 TAVTSICHGAEVALQVENQALKVFEHNDHDE-LRSITFSRKTLGQGIPISKLLHMWGLEE 356

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF-GKKNHI 412
           S +  RR ++    KIN  ++ +E+  +   DFD  G     F GKK  +
Sbjct: 357 SISAGRRLIRGGGCKINGGVVLDEEKLLNCGDFDDNGGYVAVFCGKKRRL 406


>gi|114799842|ref|YP_761314.1| tyrosyl-tRNA synthetase [Hyphomonas neptunium ATCC 15444]
 gi|114740016|gb|ABI78141.1| tyrosyl-tRNA synthetase [Hyphomonas neptunium ATCC 15444]
          Length = 416

 Score =  385 bits (989), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 182/414 (43%), Positives = 269/414 (64%), Gaps = 1/414 (0%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  +KS+FL  LS RGFI   ++  ELD  CS G   AY+GYD TA SLH GHL  +M+L
Sbjct: 1   MSDYKSEFLRELSWRGFIKDTTHKAELDAYCSNGTPVAYVGYDATADSLHVGHLMTIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ G KPI+LMGGGT+ +GDP+ +++SR ++   +I  NI  IK  F  F+++G G 
Sbjct: 61  RIFQRHGGKPIALMGGGTTKVGDPTDKEKSRPLLTDDQINANIAGIKTAFEPFLRFGDGA 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
            DA+M+NN  WL  + Y+++LR IG +F++N M+  ++VR RL+ EQ  +FLEFNY+++Q
Sbjct: 121 NDAIMVNNNDWLGELGYLEMLRAIGVYFTINTMVKQDTVRRRLEAEQPYTFLEFNYLLMQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           +YDF+EL + + CR+Q+GGSDQWGNI+ G+DL  + +    F +T+ L+TT+SG KMGKT
Sbjct: 181 SYDFLELFRRHGCRMQLGGSDQWGNIVGGVDLVHKAEGGDAFGVTAHLVTTSSGVKMGKT 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           + GA+WLN +  SPY +WQ+WRN +DADV  F +  T L   EI+R+  L+G  IN+AK 
Sbjct: 241 VGGAVWLNADRKSPYEYWQFWRNTEDADVGKFLRLFTDLGREEIERLEALEGSAINDAKI 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
            +A   TT++HG   A +A  AA   F     +  +PT  + + E+  GM +      AG
Sbjct: 301 ALANAATTLLHGAAAAAEAEAAAKAVFAGGASADALPTALVPQAELEAGMLVAAACAAAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            + S  EARR ++  AI++N++++S+   ++ + D    G IKLS GKK H + 
Sbjct: 361 LSKSNGEARRLIEQGAIRVNDALVSDPNAKVSMADMQD-GAIKLSAGKKRHALV 413


>gi|254421077|ref|ZP_05034801.1| tyrosyl-tRNA synthetase [Brevundimonas sp. BAL3]
 gi|196187254|gb|EDX82230.1| tyrosyl-tRNA synthetase [Brevundimonas sp. BAL3]
          Length = 417

 Score =  382 bits (980), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 200/413 (48%), Positives = 271/413 (65%), Gaps = 2/413 (0%)

Query: 3   AFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
           AFKSDFL  L  RG+IHQI++P ELD   + GVV  YIG+D TA SLH G L Q+M+L  
Sbjct: 5   AFKSDFLRTLQARGYIHQITHPVELDAAAADGVVAGYIGFDATAPSLHVGSLIQIMMLRR 64

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD 122
           LQ+ G KPI LMGGGT+ +GDP+ +D SR  +  + IQ NI+ IK +F+ F+ +G G TD
Sbjct: 65  LQQAGGKPIVLMGGGTTKVGDPTGKDTSRPQLTEETIQSNIDSIKTVFAKFLTFGDGPTD 124

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
           A+M+NN+ WL    YI  LR+ G+ F+VNRMLSF+SV+ RL+REQ ++FLEFNYM++Q+ 
Sbjct: 125 AVMVNNDDWLSGYGYIQFLRDFGTHFTVNRMLSFDSVKLRLEREQPMTFLEFNYMLMQSV 184

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DF+EL +     LQMGGSDQWGNI  G+DL  R+     F LT+PLLTTASG KMGKT  
Sbjct: 185 DFLELNRALKVTLQMGGSDQWGNITSGVDLVRRVDQKAAFGLTTPLLTTASGGKMGKTAQ 244

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKII 302
           GA+WLN E  SPY++WQ+WRN +DADV  F +  T L + +I     L+G  IN+AKK +
Sbjct: 245 GAVWLNAEQLSPYDYWQFWRNAEDADVGRFMRLFTDLSLEQIAEYEALEGAAINDAKKAL 304

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFA 362
           A   TT++HG EEA KA  AA   F+    S  +PT+ +   EV   M +  ++ KAG  
Sbjct: 305 ADAATTLLHGAEEAAKARAAAETAFEKGQVSADLPTVELPVAEVYGAM-IAAVVTKAGLT 363

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            S  EARR  +   +++N++ +++    +   D    G IKL+ GKK  ++  
Sbjct: 364 ASNGEARRLAQGGGLRLNDAAVADGAQLLTQADLKD-GVIKLAAGKKKIVLVR 415


>gi|71083438|ref|YP_266157.1| tyrosyl-tRNA synthetase [Candidatus Pelagibacter ubique HTCC1062]
 gi|97201784|sp|Q4FMN5|SYY_PELUB RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|71062551|gb|AAZ21554.1| tyrosyl-tRNA synthetase [Candidatus Pelagibacter ubique HTCC1062]
          Length = 409

 Score =  381 bits (979), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 189/409 (46%), Positives = 268/409 (65%), Gaps = 4/409 (0%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           FL    +RGF +Q +    L  L  +  + AYIG+D TA SLH G L Q+M L  LQK G
Sbjct: 4   FLKEFKDRGFFYQCTGEENLSQLLDKEKIRAYIGFDCTAESLHVGSLLQIMCLRLLQKHG 63

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+PI L+GGGT+ IGDPS +D++R ++   EI++NI  I+ I  +F+     +T  + +N
Sbjct: 64  HQPIVLLGGGTTRIGDPSGKDKTRTILSEDEIEKNINNIEKILKNFLDDKDPETKPIFVN 123

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N TWL ++ YI  LR++G  F++N+MLSF+SV+ RL+REQSLS++EFNYMILQAYDF+EL
Sbjct: 124 NYTWLKNLNYISFLRDVGKHFTINKMLSFDSVKIRLEREQSLSYMEFNYMILQAYDFLEL 183

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            K   C LQ+GGSDQWGNI+ G+DL +R     ++ LT+PL+T ASG KMGKT SGA+WL
Sbjct: 184 NKKEKCMLQIGGSDQWGNIVNGVDLIKRYSNNHVYGLTTPLITLASGAKMGKTESGAVWL 243

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           +K+  S Y++WQ+WRNIDD DV+ F K  T + + EI+    ++   INE K ++A + T
Sbjct: 244 DKKFLSSYDYWQFWRNIDDRDVLKFLKIFTDINVDEIEN---IKDDNINELKILLANKAT 300

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
           +M+HG +EA K    A + F  +    ++PT  I+K  +   + +L L++ +   +S +E
Sbjct: 301 SMLHGEDEARKCQETAKQTFSENSLGDNLPTTQINKKMLDDNISILDLVILSKLESSKSE 360

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            RR +K N IKIN   IS+EK  I  +D   +  IKLS GKK HI   L
Sbjct: 361 IRRLIKGNGIKINGQAISDEKFLIT-EDLFKSSLIKLSLGKKKHIKVEL 408


>gi|91762139|ref|ZP_01264104.1| tyrosyl-tRNA synthetase [Candidatus Pelagibacter ubique HTCC1002]
 gi|91717941|gb|EAS84591.1| tyrosyl-tRNA synthetase [Candidatus Pelagibacter ubique HTCC1002]
          Length = 409

 Score =  381 bits (979), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 189/409 (46%), Positives = 269/409 (65%), Gaps = 4/409 (0%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           FL    +RGF +Q +    L  L  +  + AYIG+D TA SLH G L Q+M L  LQK G
Sbjct: 4   FLKEFKDRGFFYQCTGEENLSQLLDKEKIRAYIGFDCTAESLHVGSLLQIMCLRLLQKHG 63

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+PI L+GGGT+ IGDPS +D++R ++  +EI++NI  I+ I  +F+     +T  + +N
Sbjct: 64  HQPIVLLGGGTTRIGDPSGKDKTRTILSEKEIEKNINNIEKILKNFLDDKDPETKPIFVN 123

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N TWL ++ YI  LR++G  F++N+MLSF+SV+ RL+REQSLS++EFNYMILQAYDF+EL
Sbjct: 124 NYTWLKNLNYISFLRDVGKHFTINKMLSFDSVKIRLEREQSLSYMEFNYMILQAYDFLEL 183

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            K   C LQ+GGSDQWGNI+ G+DL +R     ++ LT+PL+T ASG KMGKT SGA+WL
Sbjct: 184 NKKEKCMLQIGGSDQWGNIVNGVDLIKRYSNNHVYGLTTPLITLASGAKMGKTESGAVWL 243

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           +K+  S Y++WQ+WRNIDD DV+ F K  T + + EI+    ++   INE K ++A + T
Sbjct: 244 DKKFLSSYDYWQFWRNIDDRDVLKFLKIFTDINVDEIEN---IKDDNINELKILLANKAT 300

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
           +M+HG +EA K    A + F  +    ++PT  I+K  +   + +L L++ +   +S +E
Sbjct: 301 SMLHGEDEASKCQETAKQTFSENSLGDNLPTTHINKKMLDDNISILDLVILSKLESSKSE 360

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            RR +K N IKIN   IS+EK  I  +D   +  IKLS GKK HI   L
Sbjct: 361 IRRLIKGNGIKINGQAISDEKFLIT-EDLFKSSLIKLSLGKKKHIKVEL 408


>gi|310829601|ref|YP_003961958.1| tyrosyl-tRNA synthetase [Eubacterium limosum KIST612]
 gi|308741335|gb|ADO38995.1| tyrosyl-tRNA synthetase [Eubacterium limosum KIST612]
          Length = 408

 Score =  379 bits (972), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 180/390 (46%), Positives = 258/390 (66%), Gaps = 4/390 (1%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +   +L ERG I Q +N  E+  L     VT YIG+D TA SLH GH  Q+M++  +Q+ 
Sbjct: 3   NVFDVLKERGMIEQCTNEEEIRKLLGSESVTFYIGFDPTADSLHVGHFIQIMVMAHMQRY 62

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI+L+GGGT++IGDPS R + R++M  + I EN EK K +F  F+ +   +  A+M+
Sbjct: 63  GHRPIALIGGGTTMIGDPSGRQDLRQVMTQERIAENGEKFKKVFEKFLTFEDDR--AMMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  + YI+ LR++GS FSVNRML+ E  +SR+  E+ L+FLEFNYM+LQAYDF  
Sbjct: 121 NNAEWLLPLNYIEFLRDVGSHFSVNRMLTAECYKSRM--EKGLTFLEFNYMLLQAYDFYV 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L KNY C++Q GG+DQW NII G +L  R     ++ +T  LLTT+ G KMGKT  GA+W
Sbjct: 179 LHKNYGCKMQFGGNDQWSNIIAGAELVRRKDAQTVYGMTFSLLTTSEGIKMGKTAKGALW 238

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           L+ E TSPY F+QYWRN+ DADV      LT LPM E+ R+  L+G EIN+AK+I+A E+
Sbjct: 239 LDPEKTSPYEFYQYWRNVADADVEKCLAMLTFLPMDEVHRLGSLEGSEINKAKEILAYEV 298

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
           T MVH +E+A+KA  A+   F   + +  +P++ +S+D +  GM +LTL+  AG   S +
Sbjct: 299 TAMVHSKEDADKAQEASRALFAGGVKTDDIPSVDLSRDALGDGMEILTLLDAAGLIPSRS 358

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDF 396
           E RR ++   I+++ + I++ K  +   DF
Sbjct: 359 EGRRLVQQGGIEVDGNKITDIKALVTPADF 388


>gi|15604411|ref|NP_220928.1| tyrosyl-tRNA synthetase [Rickettsia prowazekii str. Madrid E]
 gi|6226208|sp|Q9ZCZ4|SYY_RICPR RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|3861105|emb|CAA15005.1| TYROSYL-TRNA SYNTHETASE (tyrS) [Rickettsia prowazekii]
 gi|292572175|gb|ADE30090.1| Tyrosyl-tRNA synthetase [Rickettsia prowazekii Rp22]
          Length = 411

 Score =  379 bits (972), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 179/409 (43%), Positives = 271/409 (66%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           F+     +G+++Q ++   L  +  +  + AYIG+D TA+SLH G L Q+M+L  LQK G
Sbjct: 3   FIEEFIYKGYLNQCTDLARLSAITQEAKIAAYIGFDCTATSLHIGSLMQIMILRLLQKHG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H PI ++GGGTS IGDP+ +D +R+ +  ++I+ N E IK   S FIK+G  + DA++L+
Sbjct: 63  HTPIVIIGGGTSKIGDPAGKDVTRKALTQEDIKRNAEGIKKSLSKFIKFGKDQGDAIILD 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL S+ Y+D LR+ GS+FSVNRML+ +SV+ RL R   LSFLE NYM+LQ+YDF  L
Sbjct: 123 NAEWLDSLNYLDFLRDFGSYFSVNRMLTMDSVKLRLDRSHHLSFLELNYMLLQSYDFYYL 182

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
           +KNY+C LQ+GGSDQWGNI+ G DL  ++   ++F +T+PLLTTASG KMGKT +GA+WL
Sbjct: 183 SKNYNCILQLGGSDQWGNIVIGADLIRKISGKEVFGMTTPLLTTASGAKMGKTAAGAVWL 242

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           N+++ SPY+++QYWRN +DADV+ FAK  + L + E+++   L  ++IN AKK +A E+T
Sbjct: 243 NEDLLSPYDYYQYWRNCEDADVMRFAKLYSELDIVELNKFESLVSEDINAAKKQLAYELT 302

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
            + HG   A+ A   A++ F+     +++ T  ++ + +  G+    L   A  A S +E
Sbjct: 303 KLCHGERLAKLALETAVKIFEQGDIDENLHTFILAPEILQSGISAYNLFYNANLARSKSE 362

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           AR+ ++    KIN+ ++ +E + I      +   IKLS GKK HI+  +
Sbjct: 363 ARKIIRGKGAKINDQLVEDENMTIDTNFLRNRKVIKLSVGKKRHILVKV 411


>gi|224013912|ref|XP_002296620.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220968972|gb|EED87316.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 418

 Score =  377 bits (969), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 188/426 (44%), Positives = 272/426 (63%), Gaps = 30/426 (7%)

Query: 12  LSERGFIHQISNPRELDILCSQG-----VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +RGF+ Q +N  ELD L ++       V+AY+G+D TA SLH G L Q+M+L  LQ++
Sbjct: 1   MRDRGFLFQCTNLSELDALLTEATSKNEAVSAYLGFDATADSLHVGSLLQIMILRHLQQS 60

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD-ALM 125
           GH+PI L+GGGTS +GDP+ +DESR M+    I++N + I  +F  F+ +G    + A+M
Sbjct: 61  GHRPIVLIGGGTSKVGDPTGKDESRIMLNDDIIKKNTDGISQVFQKFLTFGEKSVEEAIM 120

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN+ WL  +KY+  LR+ G+ F++NRM+SFESV+ RL RE   SFLEFNYMILQAYDF+
Sbjct: 121 VNNDEWLSDLKYLQFLRDYGTHFTINRMMSFESVKQRLAREAPFSFLEFNYMILQAYDFL 180

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           EL + Y+ +LQ+GGSDQWGN+I G +LG R+   +L+ALT+PL+TT+ G KMGKT  GA+
Sbjct: 181 ELNRRYNAQLQLGGSDQWGNMISGCELGRRVDGKQLYALTAPLITTSDGKKMGKTAGGAV 240

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
           WLN +  S Y++WQ+WRN  D DV+ F K  T L + EI++MA+ QG +IN+AK ++A E
Sbjct: 241 WLNADKLSEYDYWQFWRNTSDEDVIRFLKLFTELSLEEIEKMAEWQGADINKAKVVLADE 300

Query: 306 ITTMVHGRE-------------EAEKAATAAMECFDMSIHSQHMPTISISKDEVS--RGM 350
            T ++HGRE             +  K+A A+ E          +  I +S+DE++   G+
Sbjct: 301 ATALLHGRECLAAIHDTIDTMFKGGKSAEASTEG---------LARIFVSEDELNAKDGV 351

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            ++ L VK G A+S  EARR ++    K+    I +E   I   DFD    + L  GKK 
Sbjct: 352 KVIDLFVKLGLASSKKEARRLVQGGGAKLGEEKIEDEFAVIAKDDFDEKNELTLRAGKKR 411

Query: 411 HIICHL 416
             +  L
Sbjct: 412 AGVVEL 417


>gi|307941634|ref|ZP_07656989.1| tyrosyl-tRNA synthetase [Roseibium sp. TrichSKD4]
 gi|307775242|gb|EFO34448.1| tyrosyl-tRNA synthetase [Roseibium sp. TrichSKD4]
          Length = 426

 Score =  376 bits (965), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 184/411 (44%), Positives = 271/411 (65%), Gaps = 2/411 (0%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
            KS+ L +L ERG ++Q S+   LD   ++G VT Y G+D TA+SLH GHL  LM L W+
Sbjct: 15  LKSETLQVLLERGLVNQASDLEALDARLAEGPVTVYAGFDATAASLHVGHLMPLMTLRWM 74

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           QK GH+PI+++GGGT+ +GDPSFR+E+R ++   +I  N+  I+      +    G   A
Sbjct: 75  QKLGHRPIAVLGGGTTQVGDPSFRNEARPLLDELKIASNVSGIRRCIERLVSM-DGDDGA 133

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           L+++N  WL   ++++ LR+ GS F+VNRM++FESV+SRL  +  L+ LEF YM+LQA D
Sbjct: 134 LLVDNAEWLTEFRFLEFLRDYGSQFTVNRMVTFESVKSRLDTQSPLTVLEFCYMMLQAVD 193

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+EL++ Y+C +Q+GGSDQWGNI+ GI+LG +    KL  LT PLLTTASG KMGKT +G
Sbjct: 194 FLELSRRYNCEMQIGGSDQWGNIVNGIELGRKADGRKLHGLTVPLLTTASGAKMGKTAAG 253

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIA 303
           A+WL+ E  SP+ FWQ+WRN  DADV  F +  T LPM+E++R++ L+G E+N+AKK++A
Sbjct: 254 AVWLHPEHLSPFVFWQFWRNTADADVGRFLRLFTELPMNEVERLSALEGHELNDAKKVLA 313

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
           T++T +VHG EEA KA       F         PT  + +  +S G+GLL L+V  GFA 
Sbjct: 314 TQVTAIVHGPEEARKALEQGEALFG-GAEELLEPTHVLPRIRLSEGLGLLELLVLVGFAG 372

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           S  EARR ++   +++N  ++ + + QI   +  +   + L+ GK+   + 
Sbjct: 373 SNGEARRLVEGGGVRLNRQVVDDARRQITAGNLQADDRLALAVGKRRKALV 423


>gi|330993145|ref|ZP_08317083.1| Tyrosyl-tRNA synthetase [Gluconacetobacter sp. SXCC-1]
 gi|329759915|gb|EGG76421.1| Tyrosyl-tRNA synthetase [Gluconacetobacter sp. SXCC-1]
          Length = 367

 Score =  374 bits (961), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 179/365 (49%), Positives = 252/365 (69%), Gaps = 2/365 (0%)

Query: 52  GHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFS 111
           G L Q+MLL  + + GH+P++LMGGGT+ IGDPSFR+E+RR+M ++ I  N+  ++G   
Sbjct: 2   GSLIQIMLLRLMHRHGHRPVALMGGGTARIGDPSFREEARRLMTAETIATNLRGVEGCLR 61

Query: 112 SFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSF 171
            F+  GTG +D L+ NN  WL  + YIDLLR++G  FSVNRMLSF+SVRSRL+REQ L+F
Sbjct: 62  QFLPLGTGPSDPLLANNADWLDRLSYIDLLRDVGIHFSVNRMLSFDSVRSRLEREQGLTF 121

Query: 172 LEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT 231
           LEFNY ILQ+YDF EL   +   LQMGGSDQWGNI+ GIDL  R+   ++F LT+PLLTT
Sbjct: 122 LEFNYSILQSYDFRELNLRHGVTLQMGGSDQWGNIVSGIDLVRRMNGAQVFGLTTPLLTT 181

Query: 232 ASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ 291
           +SG KMGKT  GA+WL+      +++WQ+WRN++DADV  F +  T LP++E DR+A L 
Sbjct: 182 SSGAKMGKTAQGAVWLSAARLPVFDYWQFWRNVEDADVGRFLRLFTELPLAECDRLAALG 241

Query: 292 GKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDM-SIHSQHMPTISISKDEVSRGM 350
           G EINEAKK++ATE T++ HGR  A++AA AA   F+  ++ +  +PT+ +    ++ G+
Sbjct: 242 GAEINEAKKVLATEATSLCHGRAAAQEAADAARRTFEEGAVTAAALPTVQVPAALLAEGV 301

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
               L V+AGFA S  EARR ++    ++N+ ++ +E   +   D    G +KLS G+K 
Sbjct: 302 PAFRLFVEAGFAASNGEARRLIRGGGARVNDVVVGDEAQVVSTADLID-GALKLSSGRKR 360

Query: 411 HIICH 415
           HI+  
Sbjct: 361 HILVQ 365


>gi|303241869|ref|ZP_07328363.1| tyrosyl-tRNA synthetase [Acetivibrio cellulolyticus CD2]
 gi|302590543|gb|EFL60297.1| tyrosyl-tRNA synthetase [Acetivibrio cellulolyticus CD2]
          Length = 409

 Score =  374 bits (961), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 177/391 (45%), Positives = 260/391 (66%), Gaps = 4/391 (1%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S     L +RGFI Q+++   +  L  +  VT YIG+D TA SLH GH  Q++++  +Q+
Sbjct: 2   SSVFETLKQRGFIAQVTHEETVRELLEKEKVTFYIGFDPTADSLHVGHFLQMVVMAHMQR 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKPI+++GGGT+++GDPS + + RRMM  +EIQ N    K   S+FI +   K  A+M
Sbjct: 62  AGHKPIAIIGGGTAMVGDPSGKTDMRRMMTREEIQSNANNFKKQLSNFIDFSDNK--AIM 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           ++N  WL  + Y+  LRE+G  FSVNRML+ E  +SRL  E+ LSF+EFNYM++Q+YDF+
Sbjct: 120 VDNADWLLDLNYVKFLREVGVHFSVNRMLTAECFKSRL--EKGLSFIEFNYMLMQSYDFL 177

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           +L +++ C L++GG DQW NI+ GI+L  R++    + +T  LLTT+ G KMGKT  GA+
Sbjct: 178 KLYQDHGCLLELGGDDQWSNILYGIELIRRVEGKDAYGMTFTLLTTSEGKKMGKTEKGAL 237

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
           WL+   T PY+F+QYWRNI+D+DV+   K LT LP+SEID +AKL+ ++INEAKKI+A E
Sbjct: 238 WLDPNKTPPYDFYQYWRNINDSDVIKCLKLLTFLPLSEIDELAKLKDQQINEAKKILAYE 297

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           +T ++HG EEA KA +AA   F     S++MPT  I  +E++ G+ +L L+VK   A S 
Sbjct: 298 VTKLIHGEEEAGKAQSAAEALFVKGASSENMPTTEIGTEELANGINILDLLVKTKLAPSK 357

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
            E RR ++   + +N   +      +K +DF
Sbjct: 358 GEGRRLIEQGGVSVNEEKVDKIDFMVKEEDF 388


>gi|148284088|ref|YP_001248178.1| tyrosyl-tRNA synthetase [Orientia tsutsugamushi str. Boryong]
 gi|189083664|sp|A5CC73|SYY_ORITB RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|146739527|emb|CAM79245.1| tyrosyl-tRNA synthetase [Orientia tsutsugamushi str. Boryong]
          Length = 413

 Score =  374 bits (961), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 190/410 (46%), Positives = 275/410 (67%), Gaps = 2/410 (0%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           F++    RG+ +Q ++   L  + +   + AYIG+D TA SLH G+L Q+M+L  LQ+ G
Sbjct: 3   FINEFINRGYFYQSTDLTRLTQISNSSQIVAYIGFDCTAQSLHVGNLMQIMILRLLQQCG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HK I ++GG T+ IGDPS +D+ RR++ + EIQ+NI  IK     FIK+   K D L+LN
Sbjct: 63  HKSIVVIGGATTKIGDPSEKDKLRRIITNDEIQQNISGIKRSLQKFIKFDETKNDVLLLN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N+ WL SI YI+ LR+ G  FSVN+ML+  SV+SRL+R   LSFLEFNYM+LQAYDF  L
Sbjct: 123 NQEWLDSINYINFLRDYGRAFSVNKMLTMNSVKSRLERHTPLSFLEFNYMLLQAYDFYYL 182

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            K Y+C LQ+GGSDQWGNI  G+DL ++L   ++F LT+PL+T +SG KMGKT++GA+WL
Sbjct: 183 NKYYNCNLQIGGSDQWGNITMGVDLVKKLSNNEVFGLTTPLMTNSSGEKMGKTVNGAVWL 242

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           N++M SPYN++QYW NI+D DV+ FAK        E+ ++ +L    +NEAKK IA +IT
Sbjct: 243 NEDMCSPYNYFQYWGNIEDNDVIRFAKLYGEFSEIELSKLTELLFNNVNEAKKQIAYKIT 302

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISK-DEVSRGMGLLTLIVKAGFATSTN 366
            + HGR+EA KA   A++ F+     +++PT +I   + +  G+ +  L+V  G A + +
Sbjct: 303 LLCHGRDEANKALNTAIQMFEHKKADENLPTFTIKDCNNLKVGIPITELLVTIGLAKTKS 362

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           E +R ++ N I+INN  ++N  L ++LQDF     I +S GKK HI+  +
Sbjct: 363 EGKRLIQGNGIRINNIKVNNINLVVQLQDFIGQV-ITVSLGKKCHILVKI 411


>gi|189184678|ref|YP_001938463.1| tyrosyl-tRNA synthetase [Orientia tsutsugamushi str. Ikeda]
 gi|254783621|sp|B3CV32|SYY_ORITI RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|189181449|dbj|BAG41229.1| tyrosyl-tRNA synthetase [Orientia tsutsugamushi str. Ikeda]
          Length = 413

 Score =  374 bits (960), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 191/411 (46%), Positives = 274/411 (66%), Gaps = 4/411 (0%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           F++    RG+ +Q ++   L  + +   + AYIG+D TA SLH G+L Q+M+L  LQ+ G
Sbjct: 3   FINEFINRGYFYQSTDLTRLTQISNSSQIVAYIGFDCTAQSLHVGNLMQIMILRLLQQCG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HK I ++GG T+ IGDPS +D+ RR++ + EIQ+NI  IK     FIK+   K D L+LN
Sbjct: 63  HKSIVVIGGATTKIGDPSEKDKLRRIITNDEIQQNISGIKRSLKKFIKFDETKNDVLLLN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N+ WL SI YI+ LR+ G  FSVN+ML+  SV+SRL+R   LSFLEFNYM+LQAYDF  L
Sbjct: 123 NQEWLDSINYINFLRDYGRAFSVNKMLTMNSVKSRLERHTPLSFLEFNYMLLQAYDFYYL 182

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            K Y+C LQ+GGSDQWGNI  G+DL ++L   ++F LT+PL+T +SG KMGKT  GA+WL
Sbjct: 183 NKYYNCNLQIGGSDQWGNITMGVDLVKKLSNNEVFGLTTPLITNSSGEKMGKTADGAVWL 242

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           N++M SPYN++QYWRNI+D DV+ FAK        E+ ++ +L    +NEAKK IA +IT
Sbjct: 243 NEDMCSPYNYFQYWRNIEDNDVIRFAKLYGEFSEVELSKLTELFFNNVNEAKKQIAYKIT 302

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISK-DEVSRGMGLLTLIVKAGFATSTN 366
            + HGR+EA KA   A++ F+     +++PT +I   + +  G+ +  L+V  G A + +
Sbjct: 303 LLCHGRDEANKALNTAIQMFEHKKADENLPTFTIKDCNNLKVGIPITELLVTIGLAKTKS 362

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDF-DSTGNIKLSFGKKNHIICHL 416
           E +R ++ N I+INN  ++N  L ++L DF D    I +S GKK HI+  +
Sbjct: 363 EGKRLIQGNGIRINNIKVNNINLVVQLHDFIDQV--ITVSLGKKCHILVKI 411


>gi|152985019|ref|YP_001346338.1| tyrosyl-tRNA synthetase [Pseudomonas aeruginosa PA7]
 gi|189083667|sp|A6UZV3|SYY_PSEA7 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|150960177|gb|ABR82202.1| tyrosyl-tRNA synthetase [Pseudomonas aeruginosa PA7]
          Length = 412

 Score =  373 bits (958), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 180/418 (43%), Positives = 256/418 (61%), Gaps = 14/418 (3%)

Query: 2   PAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
           P  + D +++L ERGF+HQ ++   L    + G VTAY+G+D TA SLH GHL  LML+ 
Sbjct: 4   PTHQQDLIALLEERGFVHQCTDREGLAAHLAAGPVTAYLGFDATADSLHVGHLQGLMLMR 63

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKT 121
           WLQK GH+P+ L+GG T+ IGDPSFRD SR ++   +IQ NI+ I  +FS ++    G  
Sbjct: 64  WLQKAGHRPLLLIGGATTRIGDPSFRDSSRPILGEAQIQANIDGIVRVFSRYVALDEGS- 122

Query: 122 DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA 181
              ++NN  WL  + Y++ L ++G  FS+NR+L+F+++R RL RE SLSFLEF Y +LQA
Sbjct: 123 ---LVNNAEWLDGVGYLEFLDQVGRHFSINRLLTFDAIRQRLDREHSLSFLEFGYTLLQA 179

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
           YDFVEL++   C LQ+GG+DQW NII G++L  R    +LF LT PLL T  G KMGK+ 
Sbjct: 180 YDFVELSRRRGCTLQLGGADQWANIINGVELSRRQGGAQLFGLTMPLLATRDGRKMGKSA 239

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKI 301
            GA+WLN E  +P++FWQ+WRN DD DV  F    + LPM E+ R+  LQG E+NEAK +
Sbjct: 240 QGAVWLNAERLAPFDFWQFWRNCDDRDVARFLALFSELPMDEVRRLGALQGAELNEAKVV 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGF 361
           +A   T + HG + A  AA AA   F        +P + IS++ +++G+ L  L+V    
Sbjct: 300 LANAATALAHGADAARAAADAARGVFADGARDAGLPLVRISRERLAQGLSLTELLVDNAL 359

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNI---KLSFGKKNHIICHL 416
             S    RR      ++++   +++        D   TG +   +LS GKK H+   L
Sbjct: 360 QASRGAVRRLAAGGGLRLDGMPVADP-------DAPLTGEVDGRRLSLGKKQHLQLRL 410


>gi|51473738|ref|YP_067495.1| tyrosyl-tRNA synthetase [Rickettsia typhi str. Wilmington]
 gi|81390039|sp|Q68WH9|SYY_RICTY RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|51460050|gb|AAU04013.1| L-tyrosine-tRNATyr ligase (AMP-forming) [Rickettsia typhi str.
           Wilmington]
          Length = 411

 Score =  372 bits (955), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 178/407 (43%), Positives = 266/407 (65%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           F+     +G++HQ ++  +L  +  +  + AYIG+D TA+SLH G L Q+M+L  LQK G
Sbjct: 3   FIEEFIYKGYLHQCTDLDQLTAITQEVKIAAYIGFDCTATSLHIGSLMQIMILRLLQKHG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H PI ++GGGTS IGDPS ++ +R+ +  ++I+ N   IK   S FIK+G  + DA++L+
Sbjct: 63  HTPIVIIGGGTSKIGDPSGKEVTRKALTQEDIKRNTAGIKKSLSKFIKFGKDQGDAIILD 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL S+ Y+D LR+ G  FSVNRML+ +SV+ RL+R   LSFLE NYM+LQAYDF  L
Sbjct: 123 NAEWLDSLNYLDFLRDFGRHFSVNRMLTMDSVKLRLERSHHLSFLELNYMLLQAYDFYYL 182

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
           +K+Y+C LQ+GGSDQWGNI+ G DL  R+   ++F +T+PLLTTASG KMGKT +GA+WL
Sbjct: 183 SKHYNCILQLGGSDQWGNIVIGADLIRRISGKEVFGMTTPLLTTASGAKMGKTAAGAVWL 242

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           N+++ SPY+++QYWRN +DADV+ FAK  + L + E+++   L  ++IN AKK +A E+T
Sbjct: 243 NEDLLSPYDYYQYWRNCEDADVIRFAKLYSELDIIELNKFEHLVSEDINAAKKQLAYELT 302

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
            + HG   A+ A   A+  F+     +++ T  ++ + +  G+    L      A S +E
Sbjct: 303 KLCHGERLAKLALETAVRIFEQGDIDENLHTFILAPEILQAGISAYKLFYNVNLARSKSE 362

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           AR+ ++    KIN+ ++ +E + I          IKLS GKK HI+ 
Sbjct: 363 ARKIIRGKGAKINDQLVEDENMTIDTNFLLDKKVIKLSVGKKRHILV 409


>gi|330814306|ref|YP_004358545.1| tyrosyl-tRNA synthetase cluster 1 [Candidatus Pelagibacter sp.
           IMCC9063]
 gi|327487401|gb|AEA81806.1| tyrosyl-tRNA synthetase cluster 1 [Candidatus Pelagibacter sp.
           IMCC9063]
          Length = 412

 Score =  370 bits (951), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 181/409 (44%), Positives = 273/409 (66%), Gaps = 2/409 (0%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L+    RG+  Q +N   L+ L     ++ YIG+D TASSLH G L Q+M L   QK G
Sbjct: 5   LLTEFKNRGYFFQCTNENYLEKLLESKKISFYIGFDCTASSLHVGSLIQIMCLRLFQKFG 64

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKPI L+GGGT+++GDPS ++ESR+++  ++I++NI++IKGIFS F+         + +N
Sbjct: 65  HKPIVLLGGGTTMVGDPSGKEESRKILTEEQIEKNIQQIKGIFSKFLDR-ENMEKVVYVN 123

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N+ WL  + YID LR  G  F++NRML+F+SV++RL+REQSLSFLEFNYMILQAYD++EL
Sbjct: 124 NKKWLTKLNYIDFLRTYGKHFTLNRMLTFDSVKTRLEREQSLSFLEFNYMILQAYDYLEL 183

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            KN DC LQ+GGSDQWGNI+ G+DL  +    +   LT+PL+TTA G KMGKT  GA+WL
Sbjct: 184 FKNNDCLLQIGGSDQWGNIVNGVDLIRKEIQGEAMGLTTPLITTAQGKKMGKTEDGAVWL 243

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           N+++ S Y++WQ+WRN DD DV+ +    T L +  I    +  G ++N  K ++A E T
Sbjct: 244 NEDLVSTYDYWQFWRNTDDRDVIRYLYLFTELEVETIKSYEQYTGNQLNGLKILLANEAT 303

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
           T++HG++ A++A   +   F+     + +P+  I K E+ +G+ L  ++++  F++S  +
Sbjct: 304 TLLHGKKAAQEAEETSRSTFEERSTGKDLPSKKIKKSEIEKGIALKDVLLEIQFSSSGGD 363

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            +R++ + A +INN I +NE+ +I L D      IK+SFGKK H + ++
Sbjct: 364 FKRNMVNGAYRINNIIETNEEKKITLTDV-VNKQIKISFGKKKHFVINV 411


>gi|168335294|ref|ZP_02693393.1| tyrosyl-tRNA synthetase [Epulopiscium sp. 'N.t. morphotype B']
          Length = 410

 Score =  370 bits (950), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 183/404 (45%), Positives = 262/404 (64%), Gaps = 5/404 (1%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +   IL ERGFI Q ++  EL  L     +T YIG+D TA SLH GH   +M +  +Q  
Sbjct: 2   NVFDILEERGFIQQTTHKEELRQLLENEKITFYIGFDPTADSLHVGHFVTIMAMRHMQMA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI+LMGGGT +IGDPS + + R+MM  + I EN+   K  FS FI +   K  A++ 
Sbjct: 62  GHRPIALMGGGTGMIGDPSGKTDMRKMMSIETINENVNCFKKQFSRFIDFDNDK--AIIA 119

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL ++ YI+LLRE+G  FSVNRML+FE  + R+  E+ LSFLEFNYMI+Q+YDF+E
Sbjct: 120 NNADWLMNLNYIELLREVGVHFSVNRMLTFECFKQRM--EKGLSFLEFNYMIMQSYDFLE 177

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + Y+C+L++GG+DQW NI+ G++L  RL     F +T  LL  + G KMGKT++GA+W
Sbjct: 178 LYRRYNCKLELGGNDQWSNILGGVELVRRLHGDTAFGMTFTLLANSEGQKMGKTVNGALW 237

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           L+K  TSPY F+QYWRN+DD+DV      LT LPM E++ ++ L+G  IN+AK+I+A E+
Sbjct: 238 LDKNKTSPYEFYQYWRNVDDSDVKMCLSLLTFLPMDEVNHLSSLEGANINKAKEILAYEV 297

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVK-AGFATST 365
           T +VHG+E+A +A TAA   F        +PT +I++ ++++G+ +++L+V     A S 
Sbjct: 298 TKIVHGQEDAIQAQTAAKAAFSGGAAKGSLPTTNITQTQLNQGIDIISLLVDLTKLAPSK 357

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
            EARR +  N IK+    IS+ K  I    F+      +  GKK
Sbjct: 358 GEARRLITQNGIKLEGKTISDIKFIITKDLFNQNNAFMIQKGKK 401


>gi|107103655|ref|ZP_01367573.1| hypothetical protein PaerPA_01004725 [Pseudomonas aeruginosa PACS2]
          Length = 412

 Score =  370 bits (950), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 175/416 (42%), Positives = 256/416 (61%), Gaps = 8/416 (1%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           +P  + D +++L ERGF+HQ ++   L    + G  TAY+G+D TA SLH GHL  LML+
Sbjct: 3   VPTHQQDLIALLEERGFVHQCTDRDGLAAHLAAGPATAYLGFDATADSLHVGHLQGLMLM 62

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            WLQK GH+P+ L+GG T+ IGDPSFRD SR ++   +IQ NI+ I  +FS +++     
Sbjct: 63  RWLQKAGHRPLLLIGGATTRIGDPSFRDSSRPILTEAQIQANIDGIARVFSRYVEL---- 118

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
            D  ++NN  WL  + Y++ L  +G  FS+NR+L+F+++R RL RE SLSFLEF Y +LQ
Sbjct: 119 HDDSLVNNAEWLDGVGYLEFLDRVGRHFSINRLLTFDAIRQRLDREHSLSFLEFGYTLLQ 178

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVEL++   C LQ+GG+DQW NII G++L  R    +LF LT PLL T+ G KMGK+
Sbjct: 179 AYDFVELSRRRGCTLQLGGADQWANIINGVELSRRQGGAQLFGLTMPLLATSDGRKMGKS 238

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
             GA+WLN E  +P++FWQ+WRN DD DV  F    + LPM E+ R+  LQG E+NEAK 
Sbjct: 239 AQGAVWLNAERLAPFDFWQFWRNCDDRDVGRFLALFSELPMDEVRRLGALQGAELNEAKV 298

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           ++A   T + HG   A  AA AA   F        +P + +S+  +++G+ L  L+++  
Sbjct: 299 VLANAATALAHGEHAARSAADAARGVFADGTRDSGLPVMKLSRARLAQGLSLTDLLLEHA 358

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
              S +  RR      ++++ + +S+    +          ++LS GKK H+   L
Sbjct: 359 IQPSRSAVRRLAAGGGLRLDGTPVSDPDAPLA----GEVDGLRLSLGKKQHLQLRL 410


>gi|218889577|ref|YP_002438441.1| tyrosyl-tRNA synthetase [Pseudomonas aeruginosa LESB58]
 gi|254237022|ref|ZP_04930345.1| tyrosyl-tRNA synthetase [Pseudomonas aeruginosa C3719]
 gi|254242823|ref|ZP_04936145.1| tyrosyl-tRNA synthetase [Pseudomonas aeruginosa 2192]
 gi|254783625|sp|B7V6L2|SYY_PSEA8 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|126168953|gb|EAZ54464.1| tyrosyl-tRNA synthetase [Pseudomonas aeruginosa C3719]
 gi|126196201|gb|EAZ60264.1| tyrosyl-tRNA synthetase [Pseudomonas aeruginosa 2192]
 gi|218769800|emb|CAW25560.1| tyrosyl-tRNA synthetase [Pseudomonas aeruginosa LESB58]
          Length = 412

 Score =  370 bits (949), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 175/416 (42%), Positives = 256/416 (61%), Gaps = 8/416 (1%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           +P  + D +++L ERGF+HQ ++   L    + G  TAY+G+D TA SLH GHL  LML+
Sbjct: 3   VPTHQQDLIALLEERGFVHQCTDRDGLAAHLAAGPATAYLGFDATADSLHVGHLQGLMLM 62

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            WLQK GH+P+ L+GG T+ IGDPSFRD SR ++   +IQ NI+ I  +FS +++     
Sbjct: 63  RWLQKAGHRPLLLIGGATTRIGDPSFRDSSRPILTEAQIQANIDGIARVFSRYVEL---- 118

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
            D  ++NN  WL  + Y++ L  +G  FS+NR+L+F+++R RL RE SLSFLEF Y +LQ
Sbjct: 119 HDDSLVNNAEWLDGVGYLEFLDRVGRHFSINRLLTFDAIRQRLDREHSLSFLEFGYTLLQ 178

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVEL++   C LQ+GG+DQW NII G++L  R    +LF LT PLL T+ G KMGK+
Sbjct: 179 AYDFVELSRRRGCTLQLGGADQWANIINGVELSRRQGGAQLFGLTMPLLATSDGRKMGKS 238

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
             GA+WLN E  +P++FWQ+WRN DD DV  F    + LPM E+ R+  LQG E+NEAK 
Sbjct: 239 AQGAVWLNAERLAPFDFWQFWRNCDDRDVGRFLALFSELPMDEVRRLGALQGAELNEAKV 298

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           ++A   T + HG   A  AA AA   F        +P + +S+  +++G+ L  L+++  
Sbjct: 299 VLANAATALAHGEHAARSAADAARGVFADGTRDSGLPVMKLSRARLAQGLSLTDLLLEHA 358

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
              S +  RR      ++++ + +S+    +          ++LS GKK H+   L
Sbjct: 359 IQPSRSAVRRLAAGGGLRLDGTPVSDPDAPLA----GEVDGLRLSLGKKQHLHLRL 410


>gi|15599333|ref|NP_252827.1| tyrosyl-tRNA synthetase [Pseudomonas aeruginosa PAO1]
 gi|81540032|sp|Q9HWP3|SYY1_PSEAE RecName: Full=Tyrosyl-tRNA synthetase 1; AltName:
           Full=Tyrosine--tRNA ligase 1; Short=TyrRS 1
 gi|9950343|gb|AAG07525.1|AE004830_6 tyrosyl-tRNA synthetase [Pseudomonas aeruginosa PAO1]
          Length = 412

 Score =  369 bits (948), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 175/416 (42%), Positives = 256/416 (61%), Gaps = 8/416 (1%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           +P  + D +++L ERGF+HQ ++   L    + G  TAY+G+D TA SLH GHL  LML+
Sbjct: 3   VPTHQQDLIALLEERGFVHQCTDRDGLAAHLAAGPATAYLGFDATADSLHVGHLQGLMLM 62

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            WLQK GH+P+ L+GG T+ IGDPSFRD SR ++   +IQ NI+ I  +FS +++     
Sbjct: 63  RWLQKAGHRPLLLIGGATTRIGDPSFRDSSRPILTEAQIQANIDGIARVFSRYVEL---- 118

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
            D  ++NN  WL  + Y++ L  +G  FS+NR+L+F+++R RL RE SLSFLEF Y +LQ
Sbjct: 119 HDDSLVNNAEWLDGVGYLEFLDRVGRHFSINRLLTFDAIRQRLDREHSLSFLEFGYTLLQ 178

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVEL++   C LQ+GG+DQW NII G++L  R    +LF LT PLL T+ G KMGK+
Sbjct: 179 AYDFVELSRRRGCTLQLGGADQWANIINGVELSRRQGGAQLFGLTMPLLATSDGRKMGKS 238

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
             GA+WLN E  +P++FWQ+WRN DD DV  F    + LPM E+ R+  LQG E+NEAK 
Sbjct: 239 AQGAVWLNAERLAPFDFWQFWRNCDDRDVGRFLALFSELPMDEVRRLGALQGAELNEAKV 298

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           ++A   T + HG   A  AA AA   F        +P + +S+  +++G+ L  L+++  
Sbjct: 299 VLANAATALAHGEHAARSAADAARGVFADGTRDSGLPVMKLSRARLAQGLSLTDLLLEHA 358

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
              S +  RR      ++++ + +S+    +          ++LS GKK H+   L
Sbjct: 359 IQPSRSAVRRLAAGGGLRLDGTPVSDPDTPLA----GEVDGLRLSLGKKQHLHLRL 410


>gi|296387304|ref|ZP_06876803.1| tyrosyl-tRNA synthetase [Pseudomonas aeruginosa PAb1]
          Length = 412

 Score =  369 bits (948), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 175/416 (42%), Positives = 256/416 (61%), Gaps = 8/416 (1%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           +P  + D +++L ERGF+HQ ++   L    + G  TAY+G+D TA SLH GHL  LML+
Sbjct: 3   VPTHQQDLIALLEERGFLHQCTDRDGLAAHLAAGPATAYLGFDATADSLHVGHLQGLMLM 62

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            WLQK GH+P+ L+GG T+ IGDPSFRD SR ++   +IQ NI+ I  +FS +++     
Sbjct: 63  RWLQKAGHRPLLLIGGATTRIGDPSFRDSSRPILTEAQIQANIDGIARVFSRYVEL---- 118

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
            D  ++NN  WL  + Y++ L  +G  FS+NR+L+F+++R RL RE SLSFLEF Y +LQ
Sbjct: 119 HDDSLVNNAEWLDGVGYLEFLDRVGRHFSINRLLTFDAIRQRLDREHSLSFLEFGYTLLQ 178

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVEL++   C LQ+GG+DQW NII G++L  R    +LF LT PLL T+ G KMGK+
Sbjct: 179 AYDFVELSRRRGCTLQLGGADQWANIINGVELSRRQGGAQLFGLTMPLLATSDGRKMGKS 238

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
             GA+WLN E  +P++FWQ+WRN DD DV  F    + LPM E+ R+  LQG E+NEAK 
Sbjct: 239 AQGAVWLNAERLAPFDFWQFWRNCDDRDVGRFLALFSELPMDEVRRLGALQGAELNEAKV 298

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           ++A   T + HG   A  AA AA   F        +P + +S+  +++G+ L  L+++  
Sbjct: 299 VLANAATALAHGEHAARSAADAARGVFADGTRDSGLPVMKLSRARLAQGLSLTDLLLEHA 358

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
              S +  RR      ++++ + +S+    +          ++LS GKK H+   L
Sbjct: 359 IQPSRSAVRRLAAGGGLRLDGTPVSDPDAPLA----GEVDGLRLSLGKKQHLQLRL 410


>gi|153953394|ref|YP_001394159.1| tyrosyl-tRNA synthetase [Clostridium kluyveri DSM 555]
 gi|219854023|ref|YP_002471145.1| hypothetical protein CKR_0680 [Clostridium kluyveri NBRC 12016]
 gi|254783590|sp|B9DZQ6|SYY_CLOK1 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|254783591|sp|A5N680|SYY_CLOK5 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|146346275|gb|EDK32811.1| TyrS1 [Clostridium kluyveri DSM 555]
 gi|219567747|dbj|BAH05731.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 406

 Score =  369 bits (947), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 185/406 (45%), Positives = 265/406 (65%), Gaps = 7/406 (1%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           ++   IL ERG+I QI++  E+  L  +  VT YIG+D TA SLH GH  Q+M++  +QK
Sbjct: 2   ANVYDILLERGYIKQITHEDEVRELLGKEKVTFYIGFDPTADSLHIGHFLQMMVMSHMQK 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKPI+L+GGGT++IGDP+ + + R+M+  ++IQ N +  K  FS FI +   K  A+M
Sbjct: 62  AGHKPIALLGGGTAMIGDPTGKTDMRKMLSREQIQHNADCFKKQFSKFIDFEDEK--AIM 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
            NN  WL ++ Y++ LREIG  FSVN+ML+ E  + R+  E+ L+FLEFNYM++Q YDF+
Sbjct: 120 ANNADWLMNLNYVNFLREIGVHFSVNKMLTAECFKQRM--EKGLTFLEFNYMLMQGYDFL 177

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           EL + Y C  QMGG DQW NII G++L  + +    F +T  LLT + G KMGKT  GAI
Sbjct: 178 ELNRRYGCTFQMGGDDQWANIIAGVNLIRKKERKPAFGMTFTLLTKSDGKKMGKTEGGAI 237

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
           WL+KE TSPY+F+QYWRN+DDADV      LT LPM E+ R++ L G++INEAKK++A E
Sbjct: 238 WLDKEKTSPYDFYQYWRNVDDADVEKCLLLLTFLPMDEVKRLSSLPGEKINEAKKVLAYE 297

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           +T ++HG +EA+ A  AA   F       ++PTI +  DE S G  ++ L+V      S 
Sbjct: 298 VTKIIHGEKEAQMAKEAAEALFSGGESLNNVPTIEL--DESSLGCSVVELLVDIHILPSK 355

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           +EARR +K N + IN   +++ +L++    F   G + +  GKKN+
Sbjct: 356 SEARRLIKQNGLTINGEKVTDSELKVTKDHF-KNGELLIRRGKKNY 400


>gi|116052172|ref|YP_788984.1| tyrosyl-tRNA synthetase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|122261320|sp|Q02SV2|SYY_PSEAB RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|115587393|gb|ABJ13408.1| tyrosyl-tRNA synthetase [Pseudomonas aeruginosa UCBPP-PA14]
          Length = 412

 Score =  369 bits (946), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 175/416 (42%), Positives = 256/416 (61%), Gaps = 8/416 (1%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           +P  + D +++L ERGF+HQ ++   L    + G  TAY+G+D TA SLH GHL  LML+
Sbjct: 3   VPTHQQDLIALLEERGFVHQCTDRDGLAAHLAAGPATAYLGFDATADSLHIGHLQGLMLM 62

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            WLQK GH+P+ L+GG T+ IGDPSFRD SR ++   +IQ NI+ I  +FS +++     
Sbjct: 63  RWLQKAGHRPLLLIGGATTRIGDPSFRDSSRPILTEAQIQANIDGIARVFSRYVEL---- 118

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
            D  ++NN  WL  + Y++ L  +G  FS+NR+L+F+++R RL RE SLSFLEF Y +LQ
Sbjct: 119 HDDSLVNNAEWLDGVGYLEFLDRVGRHFSINRLLTFDAIRQRLDREHSLSFLEFGYTLLQ 178

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVEL++   C LQ+GG+DQW NII G++L  R    +LF LT PLL T+ G KMGK+
Sbjct: 179 AYDFVELSRRRGCTLQLGGADQWANIINGVELSRRQGGAQLFGLTMPLLATSDGRKMGKS 238

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
             GA+WLN E  +P++FWQ+WRN DD DV  F    + LPM E+ R+  LQG E+NEAK 
Sbjct: 239 AQGAVWLNAERLAPFDFWQFWRNCDDRDVGRFLALFSELPMDEVRRLGALQGAELNEAKV 298

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           ++A   T + HG   A  AA AA   F        +P + +S+  +++G+ L  L+++  
Sbjct: 299 VLANAATALAHGEHAARSAADAARGVFADGTRDSGLPMMKLSRARLAQGLSLTDLLLEHA 358

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
              S +  RR      ++++ + +S+    +          ++LS GKK H+   L
Sbjct: 359 IQPSRSAVRRLAAGGGLRLDGTPVSDPDAPLA----GEVDGLRLSLGKKQHLQLRL 410


>gi|160880710|ref|YP_001559678.1| tyrosyl-tRNA synthetase [Clostridium phytofermentans ISDg]
 gi|189083647|sp|A9KMS8|SYY_CLOPH RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|160429376|gb|ABX42939.1| tyrosyl-tRNA synthetase [Clostridium phytofermentans ISDg]
          Length = 410

 Score =  368 bits (945), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 179/401 (44%), Positives = 258/401 (64%), Gaps = 4/401 (0%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           +L ERGFI Q ++  E   L  +  VT YIG+D TA SL AGH   +M +  +Q+ GH+P
Sbjct: 8   VLLERGFIEQATHEAETKELLGKEKVTFYIGFDATADSLTAGHFLTVMAMMHMQRAGHRP 67

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           I+L+GGGT++IGDP+ + + R MM  + I  N +  +   S FI +   K  A++ NN  
Sbjct: 68  IALLGGGTTMIGDPTGKSDMRSMMTRETIDHNAQCFQEQLSKFIDFSDDK--AIIANNAD 125

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           WL ++ Y++ LREIG  FSVN+ML+ E  + R+  E+ L+F EFNYM++Q+YDF  L K 
Sbjct: 126 WLLNLNYVEFLREIGVHFSVNKMLTAECYKQRM--EKGLTFFEFNYMLMQSYDFWVLYKK 183

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKE 250
           Y C+LQ+GG+DQW NI+ G+DL  R +    F LT  LLTT+ G KMGKT+ GA+WLN E
Sbjct: 184 YGCKLQLGGNDQWSNILGGVDLIRRKEQAPAFGLTFKLLTTSEGLKMGKTMKGAVWLNPE 243

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMV 310
            TSPY F+QYWRNI+D  V      LT LPM E+ R+  L+G EIN AK+++A EIT +V
Sbjct: 244 KTSPYEFYQYWRNIEDVKVEECLGLLTFLPMDEVRRLGALEGAEINHAKEVLAYEITKIV 303

Query: 311 HGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARR 370
           HG EEA+KA  AA   F   + S+HMPT + S      G+ L+T+++ A  ATS ++ARR
Sbjct: 304 HGEEEAKKAQEAAKSLFAGGVTSEHMPTTTYSSAAFEEGIDLITMMIDAKLATSRSDARR 363

Query: 371 HLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           +++   + +N+  +++   + K  DF+  G + +  GKK +
Sbjct: 364 NIEQGGVSVNDVKVTDFARKFKSNDFNDDGALLVKKGKKAY 404


>gi|125973241|ref|YP_001037151.1| tyrosyl-tRNA synthetase [Clostridium thermocellum ATCC 27405]
 gi|256003719|ref|ZP_05428707.1| tyrosyl-tRNA synthetase [Clostridium thermocellum DSM 2360]
 gi|281417441|ref|ZP_06248461.1| tyrosyl-tRNA synthetase [Clostridium thermocellum JW20]
 gi|254783592|sp|A3DDC9|SYY_CLOTH RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|125713466|gb|ABN51958.1| tyrosyl-tRNA synthetase [Clostridium thermocellum ATCC 27405]
 gi|255992280|gb|EEU02374.1| tyrosyl-tRNA synthetase [Clostridium thermocellum DSM 2360]
 gi|281408843|gb|EFB39101.1| tyrosyl-tRNA synthetase [Clostridium thermocellum JW20]
 gi|316940528|gb|ADU74562.1| tyrosyl-tRNA synthetase [Clostridium thermocellum DSM 1313]
          Length = 408

 Score =  368 bits (945), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 179/406 (44%), Positives = 265/406 (65%), Gaps = 5/406 (1%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S     L ERG+I Q+++  ++  L  +  +T YIG+D TA SLH GH  Q+M++  +QK
Sbjct: 2   SSVFETLKERGYIAQLTHEEKIKELLEKEKITFYIGFDPTADSLHVGHFLQMMVMAHMQK 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+PI+L+GGGT+++GDP+ R + R+MM  +EI+ N +  K   S FI++G GK  A+M
Sbjct: 62  AGHRPIALIGGGTAMVGDPTGRTDMRKMMTREEIKHNADCFKKQLSKFIEFGEGK--AIM 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           ++N  WL  + YI+ LR+IG  FSVNRML+ E  +SRL+R   LSF+EFNYM++Q+YDF+
Sbjct: 120 VDNADWLLDLNYIEFLRDIGVHFSVNRMLTAECFKSRLER--GLSFIEFNYMLMQSYDFL 177

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           +L K Y C +Q+GG DQW NI+ GIDL  R +  +++ +T  LLTT+ G KMGKT  GA+
Sbjct: 178 KLYKEYGCIMQLGGDDQWSNILGGIDLIRRKEGKEVYGMTFTLLTTSEGKKMGKTEKGAL 237

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
           WL+   TSPY F+QYWRNI DADV+   K LT +PM EI+  AKL+ +EIN AKK +A E
Sbjct: 238 WLDANKTSPYEFYQYWRNIHDADVIKCLKLLTFVPMEEIEEYAKLKDQEINIAKKRLAFE 297

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           +T ++HG EEA  A   A   F+    + +MPT  ++  E+S G+ ++ L++K     S 
Sbjct: 298 VTKLIHGEEEALNAQKTAEALFEKGASTDNMPTTEVASGELSNGINIIDLLLKTKLIPSK 357

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
            E RR ++   I +N+  +      + + DF++ G + +  GKK +
Sbjct: 358 GEGRRLIEQGGISVNDVRVEGFDRLVTMDDFNN-GELIIKKGKKTY 402


>gi|213018657|ref|ZP_03334465.1| tyrosyl-tRNA synthetase [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
 gi|212995608|gb|EEB56248.1| tyrosyl-tRNA synthetase [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
          Length = 363

 Score =  368 bits (944), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 178/355 (50%), Positives = 248/355 (69%), Gaps = 1/355 (0%)

Query: 58  MLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG 117
           M+L  LQK G+KPI L+GGGT+ IGDPS +D++R ++  ++I +NI  IK      I + 
Sbjct: 1   MMLRHLQKFGYKPIVLLGGGTTKIGDPSGKDKARSVLPIEDINQNILGIKKTLEKMISFD 60

Query: 118 TGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYM 177
            GKT A+++NN  WL +IKYID LR+IG+ FSVNRML F+SV+ RL REQ+LSFLEFNYM
Sbjct: 61  YGKTGAIIVNNADWLDNIKYIDFLRDIGTHFSVNRMLGFDSVKIRLDREQNLSFLEFNYM 120

Query: 178 ILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
           +LQAYDFVEL K Y CR Q+GGSDQWGNI+ GI+L ++L  P+LF LT+PLL  A G KM
Sbjct: 121 LLQAYDFVELNKKYGCRFQIGGSDQWGNIVNGIELSKKLNLPELFGLTTPLLLNAQGKKM 180

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE 297
           GKT SGA+WL+  M + Y++WQY+RN+DD DV  F +  T LP+ EI ++  L+ +E NE
Sbjct: 181 GKTESGAVWLDGSMLNSYDYWQYFRNVDDQDVGRFLRLFTDLPIDEIKKLESLKDQETNE 240

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
           AKK++ATE+T + HG +EAE A +AA+  F+    S  +   +I+K++++ G+ L+ L+ 
Sbjct: 241 AKKVLATEVTKICHGCKEAELARSAAISAFENE-DSSLLSGYTITKEQIANGIPLIDLLY 299

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
             GF  S   A+R ++ N  K+N++ I++    I  + F     IKLS GKK HI
Sbjct: 300 DTGFEPSKGAAKRLIQGNGCKVNDNTINDVNYTINSESFKGQPFIKLSAGKKRHI 354


>gi|291165558|gb|EFE27607.1| tyrosine--tRNA ligase [Filifactor alocis ATCC 35896]
          Length = 410

 Score =  366 bits (940), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 187/399 (46%), Positives = 252/399 (63%), Gaps = 3/399 (0%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           +L ERGFI Q ++  E+  L  +  VT Y GYD TA SLH GH  Q M +  LQ  GH+P
Sbjct: 7   VLLERGFIAQTTHEEEIRELLGKEKVTFYTGYDPTADSLHVGHFLQAMAMRHLQLAGHRP 66

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           I L+GGGT++IGDPS R + R MM  + I+ N E  K   S FI +   K  A+M+NN  
Sbjct: 67  IILIGGGTAMIGDPSGRSDMRSMMTEETIRHNSECFKKQLSKFIDFTDDK--AIMVNNAD 124

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           WL  ++YI  +R+IG  FSVNRMLS +  ++R++ E  LSFLEFNYM++QAYDF +L + 
Sbjct: 125 WLMKLEYIPFIRDIGVHFSVNRMLSADCFKTRMQSEAGLSFLEFNYMLMQAYDFYKLNEL 184

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKE 250
           YDC+L+ GG DQW NII G DL  R      + +T  LLT + G KMGKT+SGA+WL+ E
Sbjct: 185 YDCKLEFGGDDQWSNIIAGTDLIRRKTAKSAYGMTFQLLTRSDGVKMGKTMSGAVWLDPE 244

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMV 310
            TSPY+F+QYWRNI+DA V      LT LPM E+ R+  LQ  EIN+AK+++A E+T +V
Sbjct: 245 KTSPYDFYQYWRNIEDASVEKCLALLTFLPMEEVRRLGALQDAEINKAKEVLAFEVTKIV 304

Query: 311 HGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARR 370
           H  EEA KA  AA + F     S   PT  ++K+E+ +G+G+L L+ + G + S +E RR
Sbjct: 305 HSEEEAIKAQEAARQLFGKGGTSADAPTTELTKEELEQGIGILDLLKQVGLSPSNSEGRR 364

Query: 371 HLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
            +   ++ +N+ II   K  I    F   G I L  GKK
Sbjct: 365 LVMQGSVAVNDEIIKEPKTIID-DSFLQDGVIMLRKGKK 402


>gi|169335722|ref|ZP_02862915.1| hypothetical protein ANASTE_02142 [Anaerofustis stercorihominis DSM
           17244]
 gi|169258460|gb|EDS72426.1| hypothetical protein ANASTE_02142 [Anaerofustis stercorihominis DSM
           17244]
          Length = 407

 Score =  366 bits (939), Expect = 4e-99,   Method: Compositional matrix adjust.
 Identities = 185/398 (46%), Positives = 257/398 (64%), Gaps = 5/398 (1%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG I Q+++  E+  L + G  T YIG+D TA SLH GH   L L+  LQ  G+KPI
Sbjct: 7   LVKRGLIAQVTDEEEIKELINNGKATFYIGFDPTADSLHVGHFMALCLMKRLQMAGNKPI 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GGGT +IGDPS R + R+MM  + I EN E+ K   S FI +  GK  ALM+NN  W
Sbjct: 67  ALVGGGTGMIGDPSGRTDLRQMMTVETINENCERFKEQMSRFIDFSDGK--ALMVNNADW 124

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L  + YID +R+IGS FSVNRML+FE  + R+  E+ LSFLEFNYMI+Q+YDF  L K+Y
Sbjct: 125 LRDLNYIDFIRDIGSHFSVNRMLTFECYKQRM--EKGLSFLEFNYMIMQSYDFYRLYKDY 182

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
            C +Q GG DQW N++ G +L  R      +A+T  LL  + G KMGKT SGA+WL+   
Sbjct: 183 GCNMQFGGDDQWSNMLGGTELIRRKLGKDAYAMTITLLLNSEGKKMGKTASGAVWLDPNK 242

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVH 311
           TSP++F+QYWRN+ D DV+   K LT LP+ EI++M K +G E+N+AK+I+A E+T +VH
Sbjct: 243 TSPFDFYQYWRNVGDEDVIKCLKMLTFLPLEEIEKMEKWEGSELNKAKEILAYELTELVH 302

Query: 312 GREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRH 371
           G +EA+KA  AA   F      ++MP+  I K E++ G+ LL L++KA    S +E RR 
Sbjct: 303 GEDEADKAKEAASALFKGKGSKENMPSTDIEKSEINDGISLLDLMLKAELIPSKSEGRRL 362

Query: 372 LKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
           +K   + +++  I++    I L+DF     I +  GKK
Sbjct: 363 VKQGGVSVDDIKITDVNKMITLEDFKEN-EIIIKKGKK 399


>gi|167036539|ref|YP_001664117.1| tyrosyl-tRNA synthetase [Thermoanaerobacter pseudethanolicus ATCC
           33223]
 gi|320114971|ref|YP_004185130.1| tyrosyl-tRNA synthetase [Thermoanaerobacter brockii subsp. finnii
           Ako-1]
 gi|166855373|gb|ABY93781.1| tyrosyl-tRNA synthetase [Thermoanaerobacter pseudethanolicus ATCC
           33223]
 gi|319928062|gb|ADV78747.1| tyrosyl-tRNA synthetase [Thermoanaerobacter brockii subsp. finnii
           Ako-1]
          Length = 406

 Score =  365 bits (937), Expect = 7e-99,   Method: Compositional matrix adjust.
 Identities = 185/403 (45%), Positives = 259/403 (64%), Gaps = 7/403 (1%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L +L ERG+I Q+++  E+  L  +  +T YIG+D TA SLH GH  Q+M++  +QK GH
Sbjct: 4   LDVLQERGYIQQMTHEEEIRELLEKEKITFYIGFDPTADSLHVGHFLQIMVMSHMQKAGH 63

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           +PI L+GGGT+++GDPS R + R+M+  +EI  N E  K      I +  GK  A+M NN
Sbjct: 64  RPIVLIGGGTAMVGDPSGRTDMRKMLTKEEINRNAEAFKKQMQRLIDFSDGK--AIMANN 121

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL ++ YI+ LR+IG  FSVNRML+ E  +SRL+R   LSFLEFNYM++QAYDF+EL 
Sbjct: 122 ADWLLNLNYIEFLRDIGVHFSVNRMLTAECFKSRLER--GLSFLEFNYMLMQAYDFLELN 179

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
           K Y+C +QMGG DQW NII GI+L  + +  + + +T  LLTT+ G KMGKT  GA+WL+
Sbjct: 180 KRYNCVMQMGGDDQWSNIIAGIELIRKKEGKQAYGMTFTLLTTSEGKKMGKTQKGAVWLD 239

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITT 308
              TSPY F+QYWRNI DADV      LT LPM E+ R+  L+ KEINEAKKI+A E+T 
Sbjct: 240 PNKTSPYEFYQYWRNIADADVEKALALLTFLPMDEVRRLGALKDKEINEAKKILAYEVTK 299

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
           ++HG EEA KA  AA   F+      ++P++++S D +  G  +L ++ +A    S +E 
Sbjct: 300 LIHGEEEAIKAQKAAEALFESGGDLDNVPSVTVSSDVL--GKKILDVLFEAKIIPSKSEG 357

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           RR ++   + INN  + +    IK  D     +I +  GKK +
Sbjct: 358 RRLVQQGGLYINNEKVESIDEYIK-DDMIKDNSILIRKGKKEY 399


>gi|326391203|ref|ZP_08212747.1| tyrosyl-tRNA synthetase [Thermoanaerobacter ethanolicus JW 200]
 gi|325992772|gb|EGD51220.1| tyrosyl-tRNA synthetase [Thermoanaerobacter ethanolicus JW 200]
          Length = 406

 Score =  364 bits (934), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 184/403 (45%), Positives = 259/403 (64%), Gaps = 7/403 (1%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L +L ERG+I Q+++  E+  L  +  +T YIG+D TA SLH GH  Q+M++  +QK GH
Sbjct: 4   LDVLQERGYIQQMTHEEEIRELLEKEKITFYIGFDPTADSLHVGHFLQIMVMSHMQKAGH 63

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           +PI L+GGGT+++GDPS R + R+M+  +EI  N E  K      I +  GK  A+M NN
Sbjct: 64  RPIVLIGGGTAMVGDPSGRTDMRKMLTKEEIDRNAEAFKKQMQRLIDFSNGK--AIMANN 121

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL ++ YI+ LR+IG  FSVNRML+ E  +SRL+R   LSFLEFNYM++QAYDF+EL 
Sbjct: 122 ADWLLNLNYIEFLRDIGVHFSVNRMLTAECFKSRLER--GLSFLEFNYMLMQAYDFLELN 179

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
           + Y+C +QMGG DQW NII GI+L  + +  + + +T  LLTT+ G KMGKT  GA+WL+
Sbjct: 180 RRYNCVMQMGGDDQWSNIIAGIELIRKKEGKQAYGMTFTLLTTSEGKKMGKTQKGAVWLD 239

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITT 308
              TSPY F+QYWRNI DADV      LT LPM E+ R+  L+ KEINEAKKI+A E+T 
Sbjct: 240 PNKTSPYEFYQYWRNIADADVEKALALLTFLPMDEVRRLGALKDKEINEAKKILAYEVTK 299

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
           ++HG EEA KA  AA   F+      ++P++++S D +  G  +L ++ +A    S +E 
Sbjct: 300 LIHGEEEAIKAQKAAEALFESGGDLDNVPSVTVSSDVL--GKKILDVLFEAKIIPSKSEG 357

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           RR ++   + INN  + +    IK  D     +I +  GKK +
Sbjct: 358 RRLIQQGGLYINNEKVESIDEYIK-DDMIKDNSILIRKGKKEY 399


>gi|28212031|ref|NP_782975.1| tyrosyl-tRNA synthetase [Clostridium tetani E88]
 gi|28204474|gb|AAO36912.1| tyrosyl-tRNA synthetase [Clostridium tetani E88]
          Length = 412

 Score =  363 bits (931), Expect = 4e-98,   Method: Compositional matrix adjust.
 Identities = 175/406 (43%), Positives = 268/406 (66%), Gaps = 7/406 (1%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           ++   +L ERG+I Q ++  E+  L ++  +T YIG+D TA SLH GH   LM++  +QK
Sbjct: 8   NNVFDVLKERGYIKQTTHEEEIRDLINKDKITFYIGFDPTADSLHIGHFLPLMMMAHMQK 67

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+PI+L+GGGT  IGDPS + E R+M+  + I +N+  IK   S FI +   K  A++
Sbjct: 68  AGHRPIALVGGGTVRIGDPSGKSEMRKMLSKEAIDKNVSSIKSQISRFIDFSDDK--AIL 125

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           ++N  WL ++ Y++ +REIG  FSVN+ML+ E  + RL  E+ LSFLEFNYM++QAYDF+
Sbjct: 126 VDNADWLLNLNYLEFIREIGVHFSVNKMLTAECFKQRL--EKGLSFLEFNYMLMQAYDFL 183

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L + Y C +++GG DQW N++ G DL  R ++   +A+T  LLT + G KMGKT++GA+
Sbjct: 184 CLNRKYGCVMELGGDDQWSNMLAGTDLIRREESKSAYAMTCTLLTNSEGNKMGKTVNGAL 243

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
           WL+K+ TSPY F+QYWRN+DDADV      LT LPM E+ R+A L+G +INEAKK++A E
Sbjct: 244 WLDKDKTSPYEFYQYWRNVDDADVEKCLALLTFLPMDEVRRLAALEGNKINEAKKVLAYE 303

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           +T ++HG +EA+KA  A+   F       ++PT++ISKD++  G G+L ++V+     S 
Sbjct: 304 VTKLIHGEDEAKKAEEASEALFGAGKDMSNVPTVNISKDDL--GKGILDILVETKILPSK 361

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
            EARR ++   + IN   +++  + +  +D     +I +  GKK++
Sbjct: 362 GEARRLIQQGGLSINEEKVTDINMAVT-EDLFEENSIIIRRGKKSY 406


>gi|306820971|ref|ZP_07454591.1| tyrosine--tRNA ligase [Eubacterium yurii subsp. margaretiae ATCC
           43715]
 gi|304551085|gb|EFM39056.1| tyrosine--tRNA ligase [Eubacterium yurii subsp. margaretiae ATCC
           43715]
          Length = 407

 Score =  362 bits (930), Expect = 4e-98,   Method: Compositional matrix adjust.
 Identities = 183/386 (47%), Positives = 249/386 (64%), Gaps = 4/386 (1%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+   +L ERGFI Q S+  EL  L     VT Y GYD TA SLH GH  Q + +  +Q 
Sbjct: 2   SNVFDVLKERGFIAQTSHEEELRELFENERVTFYTGYDATADSLHVGHFLQAIAMRHMQL 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+PI L+GGGT++IGDPS R + R+M+  ++I+ N E+ K   S FI +   K  A++
Sbjct: 62  AGHRPIVLIGGGTTMIGDPSGRTDMRQMLTPEDIKNNGERFKEQLSRFIDFSDDK--AIL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
            +N  WL +++YI  LREIG+ FSVNRML+ E  +SR+  E+ LSFLEFNYMI+QAYDF 
Sbjct: 120 EDNAHWLMNLEYIPFLREIGAEFSVNRMLTAECFKSRM--EKGLSFLEFNYMIMQAYDFY 177

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L K YDC++Q GG DQW NI+ G DL  R    K FALT  LLTT+ G KMGKT+SGA+
Sbjct: 178 MLNKMYDCKVQCGGDDQWSNILAGADLVRRKSQKKAFALTFNLLTTSDGKKMGKTMSGAL 237

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
           WL+KE TSPY F+QYWRNI+DA V      LT LPM E+ R+  L+   INEAK+++A E
Sbjct: 238 WLDKEKTSPYEFFQYWRNIEDASVEKCLGLLTFLPMDEVRRLGALKDSAINEAKEVLAYE 297

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
            T +VHG+EEA+KA  AA   F  +  S + PT  ++K ++ +G+ +L L+     + S 
Sbjct: 298 TTKLVHGKEEADKALEAARAIFSSNASSANAPTTIVNKADLDKGINILELLKLTNLSPSN 357

Query: 366 NEARRHLKSNAIKINNSIISNEKLQI 391
            E RR ++   I +N+  I++    +
Sbjct: 358 AEGRRLIQQGGITVNDEKITDTNFMV 383


>gi|289579444|ref|YP_003478071.1| tyrosyl-tRNA synthetase [Thermoanaerobacter italicus Ab9]
 gi|289529157|gb|ADD03509.1| tyrosyl-tRNA synthetase [Thermoanaerobacter italicus Ab9]
          Length = 406

 Score =  362 bits (930), Expect = 4e-98,   Method: Compositional matrix adjust.
 Identities = 184/403 (45%), Positives = 259/403 (64%), Gaps = 7/403 (1%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L IL ERG+I Q+++  E+  L  +  VT YIG+D TA SLH GH  Q+M++  +QK GH
Sbjct: 4   LDILQERGYIQQMTHENEIKELLEKEKVTFYIGFDPTADSLHVGHFLQIMVMSHMQKAGH 63

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           +PI L+GGGT+++GDPS R + R+M+  +EI  N E  K      I +  GK  A++ NN
Sbjct: 64  RPIVLIGGGTAMVGDPSGRTDMRKMLTKEEIDRNAEAFKKQMQRLIDFSDGK--AIIANN 121

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL ++ YI+ LR+IG  FSVNRML+ E  +SRL+R   LSFLEFNYM++QAYDF+EL 
Sbjct: 122 ADWLLNLNYIEFLRDIGVHFSVNRMLTAECFKSRLER--GLSFLEFNYMLMQAYDFLELN 179

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
           + Y+C +QMGG DQW NII GI+L  + +  + + +T  LLTT+ G KMGKT  GA+WL+
Sbjct: 180 RRYNCVMQMGGDDQWSNIIAGIELIRKKEGKQAYGMTFTLLTTSEGKKMGKTEKGAVWLD 239

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITT 308
              TSPY F+QYWRNI DADV      LT LPM E+ R+  L+ KEINEAKKI+A E+T 
Sbjct: 240 PNKTSPYEFYQYWRNIADADVEKALALLTFLPMDEVRRLGALKDKEINEAKKILAYEVTK 299

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
           +VHG EEA+K+  AA   F+      ++P++++  D +  G  +L ++ +A    S +E 
Sbjct: 300 LVHGEEEAQKSQKAAEALFEGGGDLNNVPSVTVPSDVL--GKKVLDVLFEAKIIPSKSEG 357

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           RR ++   + INN  + +    IK  D     +I +  GKK +
Sbjct: 358 RRLIQQGGLYINNEKVESIDEYIK-DDMIKDNSILIRKGKKEY 399


>gi|97201278|sp|Q891D3|SYY_CLOTE RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
          Length = 407

 Score =  362 bits (930), Expect = 5e-98,   Method: Compositional matrix adjust.
 Identities = 175/406 (43%), Positives = 268/406 (66%), Gaps = 7/406 (1%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           ++   +L ERG+I Q ++  E+  L ++  +T YIG+D TA SLH GH   LM++  +QK
Sbjct: 3   NNVFDVLKERGYIKQTTHEEEIRDLINKDKITFYIGFDPTADSLHIGHFLPLMMMAHMQK 62

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+PI+L+GGGT  IGDPS + E R+M+  + I +N+  IK   S FI +   K  A++
Sbjct: 63  AGHRPIALVGGGTVRIGDPSGKSEMRKMLSKEAIDKNVSSIKSQISRFIDFSDDK--AIL 120

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           ++N  WL ++ Y++ +REIG  FSVN+ML+ E  + RL  E+ LSFLEFNYM++QAYDF+
Sbjct: 121 VDNADWLLNLNYLEFIREIGVHFSVNKMLTAECFKQRL--EKGLSFLEFNYMLMQAYDFL 178

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L + Y C +++GG DQW N++ G DL  R ++   +A+T  LLT + G KMGKT++GA+
Sbjct: 179 CLNRKYGCVMELGGDDQWSNMLAGTDLIRREESKSAYAMTCTLLTNSEGNKMGKTVNGAL 238

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
           WL+K+ TSPY F+QYWRN+DDADV      LT LPM E+ R+A L+G +INEAKK++A E
Sbjct: 239 WLDKDKTSPYEFYQYWRNVDDADVEKCLALLTFLPMDEVRRLAALEGNKINEAKKVLAYE 298

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           +T ++HG +EA+KA  A+   F       ++PT++ISKD++  G G+L ++V+     S 
Sbjct: 299 VTKLIHGEDEAKKAEEASEALFGAGKDMSNVPTVNISKDDL--GKGILDILVETKILPSK 356

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
            EARR ++   + IN   +++  + +  +D     +I +  GKK++
Sbjct: 357 GEARRLIQQGGLSINEEKVTDINMAVT-EDLFEENSIIIRRGKKSY 401


>gi|307266340|ref|ZP_07547879.1| tyrosyl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1]
 gi|306918647|gb|EFN48882.1| tyrosyl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1]
          Length = 406

 Score =  362 bits (930), Expect = 5e-98,   Method: Compositional matrix adjust.
 Identities = 177/378 (46%), Positives = 249/378 (65%), Gaps = 6/378 (1%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L +L ERG+I Q+++  E+  L  +  +T YIG+D TA SLH GH  Q+M++  +QK GH
Sbjct: 4   LDVLQERGYIQQMTHEEEIRELLEKEKITFYIGFDPTADSLHVGHFLQIMVMSHMQKAGH 63

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           +PI L+GGGT+++GDPS R + R+M+  +EI  N E  K      I +  GK  A+M NN
Sbjct: 64  RPIVLIGGGTAMVGDPSGRTDMRKMLTKEEIDRNAEAFKKQMQRLIDFSDGK--AIMANN 121

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL ++ YI+ LR+IG  FSVNRML+ E  +SRL+R   LSFLEFNYM++QAYDF+EL 
Sbjct: 122 ADWLLNLNYIEFLRDIGVHFSVNRMLTAECFKSRLER--GLSFLEFNYMLMQAYDFLELN 179

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
           + Y+C +QMGG DQW NII GI+L  + +  + + +T  LLTT+ G KMGKT  GA+WL+
Sbjct: 180 RRYNCVMQMGGDDQWSNIIAGIELIRKKEGKQAYGMTFTLLTTSEGKKMGKTQKGAVWLD 239

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITT 308
              TSPY F+QYWRNI DADV      LT LPM E+ R+  L+ KEINEAKKI+A E+T 
Sbjct: 240 PNKTSPYEFYQYWRNIADADVEKALALLTFLPMDEVRRLGALKDKEINEAKKILAYEVTK 299

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
           ++HG EEA KA  AA   F+      ++P++++S D +  G  +L ++ +A    S +E 
Sbjct: 300 LIHGEEEAIKAQKAAEALFESGGDLDNVPSVTVSSDVL--GKKILDVLFEAKIIPSKSEG 357

Query: 369 RRHLKSNAIKINNSIISN 386
           RR ++   + INN  + +
Sbjct: 358 RRLIQQGGLYINNEKVES 375


>gi|297545587|ref|YP_003677889.1| tyrosyl-tRNA synthetase [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
 gi|296843362|gb|ADH61878.1| tyrosyl-tRNA synthetase [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
          Length = 406

 Score =  362 bits (929), Expect = 6e-98,   Method: Compositional matrix adjust.
 Identities = 183/403 (45%), Positives = 259/403 (64%), Gaps = 7/403 (1%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L +L ERG+I Q+++  E+  L  +  VT YIG+D TA SLH GH  Q+M++  +QK GH
Sbjct: 4   LDVLQERGYIQQMTHENEIKELLEKEKVTFYIGFDPTADSLHVGHFLQIMVMSHMQKAGH 63

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           +PI L+GGGT+++GDPS R + R+M+  +EI  N E  K      I +  GK  A++ NN
Sbjct: 64  RPIVLIGGGTAMVGDPSGRTDMRKMLTKEEINRNAEAFKKQMQRLIDFSDGK--AIIANN 121

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL ++ YI+ LR+IG  FSVNRML+ E  +SRL+R   LSFLEFNYM++QAYDF+EL 
Sbjct: 122 ADWLLNLNYIEFLRDIGVHFSVNRMLTAECFKSRLER--GLSFLEFNYMLMQAYDFLELN 179

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
           + Y+C +QMGG DQW NII GI+L  + +  + + +T  LLTT+ G KMGKT  GA+WL+
Sbjct: 180 RRYNCVMQMGGDDQWSNIIAGIELIRKKEGKQAYGMTFTLLTTSEGKKMGKTEKGAVWLD 239

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITT 308
              TSPY F+QYWRNI DADV      LT LPM E+ R+  L+ KEINEAKKI+A E+T 
Sbjct: 240 PNKTSPYEFYQYWRNIADADVEKALALLTFLPMDEVRRLGALKDKEINEAKKILAYEVTK 299

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
           +VHG EEA+K+  AA   F+      ++P++++  D +  G  +L ++ +A    S +E 
Sbjct: 300 LVHGEEEAQKSQKAAEALFEGGGDLNNVPSVTVPSDVL--GKKVLDVLFEAKIIPSKSEG 357

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           RR ++   + INN  + +    IK  D     +I +  GKK +
Sbjct: 358 RRLIQQGGLYINNEKVESIDEYIK-DDMIKDNSILIRKGKKEY 399


>gi|328544990|ref|YP_004305099.1| Tyrosyl-tRNA synthetase, class Ib [polymorphum gilvum SL003B-26A1]
 gi|326414732|gb|ADZ71795.1| Tyrosyl-tRNA synthetase, class Ib [Polymorphum gilvum SL003B-26A1]
          Length = 423

 Score =  362 bits (929), Expect = 7e-98,   Method: Compositional matrix adjust.
 Identities = 176/410 (42%), Positives = 265/410 (64%), Gaps = 3/410 (0%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
            KS+ L +L +RG +HQ ++   LD   + G VTAY G+D TA+SLH GHL  LM L WL
Sbjct: 13  LKSEALQVLVDRGLVHQCTDLEALDAAFAAGPVTAYAGFDATAASLHVGHLVPLMTLRWL 72

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           QK GH+P+ ++GGGTS++GDPSFR+++R ++   ++ ENI  I+      +     +  A
Sbjct: 73  QKLGHRPLVVLGGGTSLVGDPSFRNDARPLLTEAQVTENIAGIRRSIEGVLDLDDSE-GA 131

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            +++N  WL   ++++ LR+ G+ F+VNRM++F+SVRSRL  +Q L+ LEF YM+LQA D
Sbjct: 132 RLVDNAEWLTEFRFLEFLRDYGTQFTVNRMITFDSVRSRLDAQQPLTVLEFCYMMLQAVD 191

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+EL++ ++CRLQ+GGSDQWGNI+ G++L  +    +LF LT PL+TTA G KMGKT +G
Sbjct: 192 FLELSRRHECRLQVGGSDQWGNIVNGVELARKTDGRRLFGLTVPLVTTAGGAKMGKTAAG 251

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIA 303
           A+WL+ +  SP+ FWQ+WRN  DADV    +  T LPMSE+ R+A L+G E+NEAKKI+A
Sbjct: 252 AVWLHPDHLSPFAFWQFWRNTADADVGKCLRLFTDLPMSEVGRLAVLEGVELNEAKKILA 311

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
           T+ T +VHG   A  AA    E       +   PT       ++ G+GLL L+V+ G A 
Sbjct: 312 TQATGVVHG-PAAAGAALEQGEALFAGGEASARPTHEADCARLAAGLGLLDLLVEVGLAA 370

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
           S   ARR ++   +++N   +++ +  +   D  + G + L+ G++   +
Sbjct: 371 SNGAARRLIEGGGLRLNGETVADPRRTVTAADL-TDGRLTLAAGRRRKAV 419


>gi|58039808|ref|YP_191772.1| tyrosyl-tRNA synthetase [Gluconobacter oxydans 621H]
 gi|81351902|sp|Q5FR80|SYY_GLUOX RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|58002222|gb|AAW61116.1| Tyrosyl-tRNA synthetase [Gluconobacter oxydans 621H]
          Length = 416

 Score =  362 bits (928), Expect = 7e-98,   Method: Compositional matrix adjust.
 Identities = 192/415 (46%), Positives = 264/415 (63%), Gaps = 5/415 (1%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           MP  KS FL     RG I Q ++   LD     G +TAY+G+D TA SLH G+   +M L
Sbjct: 1   MP--KSPFLLEAQARGLIFQCTDLDALDEAMLAGPITAYVGFDPTADSLHVGNALTIMAL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT-- 118
             LQK GH+PI+LMGGGT+ IGDPSFRDE+R ++ ++ I  NI  I+     FI +    
Sbjct: 59  RLLQKHGHRPIALMGGGTAKIGDPSFRDEARSLITNETIAHNIAGIEKSLRQFITFSDED 118

Query: 119 GKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMI 178
             + A++ NN  WL  + YI+LL+++G  FSV+RML F+SVR RL+REQ L+FLEFNY I
Sbjct: 119 PSSGAILANNADWLDKLSYINLLQDVGVHFSVSRMLGFDSVRQRLEREQGLTFLEFNYSI 178

Query: 179 LQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMG 238
           LQ+YDF EL + +   LQMGGSDQWGNI+ GIDL  R    ++F LT+PL+TT+SG KMG
Sbjct: 179 LQSYDFRELNRRHGAVLQMGGSDQWGNIVSGIDLTRRTDGKQIFGLTTPLVTTSSGAKMG 238

Query: 239 KTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEA 298
           K+  GA W+  E    + +WQ+WRN +DADV  F K  T LP+ E +R+  L+G EINEA
Sbjct: 239 KSAKGATWVRPEKLPVFEYWQFWRNTEDADVGRFLKFFTDLPVEECERLGALEGSEINEA 298

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVK 358
           KKI+ATE T + HGR  AE+AA  A   F+       +P I +  + ++ G+    +  +
Sbjct: 299 KKILATEATAICHGRGAAEEAAETARRVFEQGSAQAALPEIDLPANLIAEGLPAFRVFQE 358

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
           AG A S  EARR ++    ++N+ ++S+E     L D    G +K+S+GKK HI+
Sbjct: 359 AGLAASGGEARRLIRGGGGRVNDVVVSDENQTFTLDDL-RDGVLKVSYGKKKHIL 412


>gi|284048192|ref|YP_003398531.1| tyrosyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731]
 gi|283952413|gb|ADB47216.1| tyrosyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731]
          Length = 408

 Score =  362 bits (928), Expect = 9e-98,   Method: Compositional matrix adjust.
 Identities = 176/405 (43%), Positives = 256/405 (63%), Gaps = 4/405 (0%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + L +L ERG++ Q+S+P E+  L  +  +T YIG+D TA SLH GH   LM++  +Q+ 
Sbjct: 2   NVLDVLEERGYLKQMSHPDEIRELLGKEKITFYIGFDPTADSLHVGHFIALMVMAHMQRA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI L+GGGT ++GDPS ++E R+M+  + I  NIE  K     FI    GK  A++ 
Sbjct: 62  GHRPIILLGGGTGMVGDPSGKNEMRKMLTPEFINHNIECFKKQIGRFIDLSEGK--AIVA 119

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  + Y+D+LR +G  FSVNRML+ +  ++RL  +  L+F E NYMI+QAYDF  
Sbjct: 120 NNADWLLKLNYVDMLRSVGVHFSVNRMLAADCYKTRLASDNGLTFFEMNYMIMQAYDFYT 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L KNY+C +++GG DQW N+I G++L  R      + +T+ LLT + G KMGKT+ GA+W
Sbjct: 180 LHKNYNCVMELGGDDQWSNMIAGVELIRRKDRQPAYCMTNTLLTNSQGQKMGKTVGGAVW 239

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           L+ E  SPY+F+QYWRNIDDADV      LT LPM E+ R+  LQG EINEAKK++A E+
Sbjct: 240 LDPEKFSPYDFYQYWRNIDDADVEKCLALLTFLPMEEVRRLGALQGAEINEAKKVLAYEV 299

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
           T +VHG  EAEKA  A    F    +  ++PTI++ KDE   G  LL L+ +     + +
Sbjct: 300 TKIVHGEAEAEKAKNATEALFGSGSNLDNVPTITVRKDEW--GCRLLDLLAENKVIATKS 357

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           E RR ++ N + I+++ +++    +    F    ++ L  GKK +
Sbjct: 358 EGRRLMQQNGLSIDDAKVTDVDTLVDDALFADKESLMLRKGKKKY 402


>gi|160934286|ref|ZP_02081673.1| hypothetical protein CLOLEP_03157 [Clostridium leptum DSM 753]
 gi|156866959|gb|EDO60331.1| hypothetical protein CLOLEP_03157 [Clostridium leptum DSM 753]
          Length = 413

 Score =  361 bits (927), Expect = 9e-98,   Method: Compositional matrix adjust.
 Identities = 179/399 (44%), Positives = 256/399 (64%), Gaps = 6/399 (1%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I Q++N  ++  L + G  + YIG+D TA SLH GH  Q+M++  +QK GH PI
Sbjct: 12  LKARGLIAQLTNEEKVRDLLNNGKTSFYIGFDPTADSLHVGHFVQIMVMAHMQKAGHTPI 71

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L GGGT +IGDPS +   RRMM  +EI  N+   +   S  + +  GK  A+M+NN  W
Sbjct: 72  ALFGGGTGMIGDPSGKTAMRRMMTREEIDHNVRCFQKQMSRLVDFSDGK--AIMVNNADW 129

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L ++ YI  LRE+G  FSVNRMLSFE  + RL+R   LSF E NYM++Q+YDF+ L + Y
Sbjct: 130 LMNLNYIQFLREVGVHFSVNRMLSFECYKQRLER--GLSFFELNYMLMQSYDFLVLNRKY 187

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
            C+L++GG DQW NII G++L  +    + + +T  LLTT+ G KMGKT SGA+WL+ E 
Sbjct: 188 GCQLELGGDDQWSNIIGGVELIRKADDKEAYGMTFTLLTTSDGRKMGKTESGAVWLDPEK 247

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVH 311
           TSPY+F+QYWRN+DDADV+   K LT LP+ EI+ MAK +G ++N+AK+I+A E+T ++H
Sbjct: 248 TSPYDFYQYWRNVDDADVIRCLKILTFLPLEEIEAMAKWEGSQLNKAKEILAFEVTKLIH 307

Query: 312 GREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTNEARR 370
           G EEA KA  AA   F    HS++MP+  +S  + + G + +L L+ K     S  EARR
Sbjct: 308 GEEEAVKAQNAARAIFGGGAHSENMPSTELSDGDFTDGEISVLDLLAKTKLVPSKGEARR 367

Query: 371 HLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
            +    I I++  +++   +I    F+  G + +  GKK
Sbjct: 368 LIDQGGISIDDEKVNSVTAKISKSSFEK-GFVIIKKGKK 405


>gi|18309634|ref|NP_561568.1| tyrosyl-tRNA synthetase [Clostridium perfringens str. 13]
 gi|168212096|ref|ZP_02637721.1| tyrosyl-tRNA synthetase [Clostridium perfringens B str. ATCC 3626]
 gi|168217233|ref|ZP_02642858.1| tyrosyl-tRNA synthetase [Clostridium perfringens NCTC 8239]
 gi|81767835|sp|Q8XMN6|SYY_CLOPE RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|18144311|dbj|BAB80358.1| tyrosine-tRNA ligase [Clostridium perfringens str. 13]
 gi|170709993|gb|EDT22175.1| tyrosyl-tRNA synthetase [Clostridium perfringens B str. ATCC 3626]
 gi|182380693|gb|EDT78172.1| tyrosyl-tRNA synthetase [Clostridium perfringens NCTC 8239]
          Length = 406

 Score =  361 bits (927), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 178/406 (43%), Positives = 261/406 (64%), Gaps = 7/406 (1%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           ++ L  L ERG+I Q ++  E   L  +  VT YIG+D TA SLH GH   +M +  +QK
Sbjct: 2   ANVLDTLMERGYIKQFTHEAETRELLEKEKVTFYIGFDPTADSLHVGHFIAMMFMAHMQK 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+PI+L+GGGT+ IGDPS + + R+MM ++ I  N+  IK     FI +   K  A++
Sbjct: 62  AGHRPIALIGGGTATIGDPSGKTDMRKMMTNETIAHNVACIKKQMEKFIDFSDDK--AIL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  WL +  Y++ LRE+G  FSVNRMLS E  + RL+R   LSFLEFNYM++Q YDF 
Sbjct: 120 VNNADWLLNQNYVEFLREVGVHFSVNRMLSAECFKQRLER--GLSFLEFNYMLMQGYDFY 177

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L K Y+C++++GG DQW N+I G++L  +      +A+T  LLT + G KMGKT++GA+
Sbjct: 178 VLNKKYNCKMELGGDDQWSNMIAGVELVRKKSQESAYAMTCTLLTNSEGQKMGKTVNGAL 237

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
           WL+ E TSPY F+QYWRN++DADV    K LT +PM E+ R++ L+G +INEAKK++A E
Sbjct: 238 WLDPEKTSPYEFYQYWRNVNDADVEKCLKLLTFIPMDEVRRLSSLEGSQINEAKKVLAFE 297

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           +T +VHG EEA KA  AA   F       ++PT  + KD++  G  LL ++V+A    S 
Sbjct: 298 VTKLVHGEEEATKAQQAAEALFGKGGDMSNVPTYEMGKDKL--GAELLDILVEAEIVPSK 355

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
            E +R +K   + +N   +++ K  ++  DF++ G + +  GKKN+
Sbjct: 356 AEGKRLVKQGGLSLNGEKVADFKKTLEEADFEN-GEVLIKRGKKNY 400


>gi|110802117|ref|YP_697946.1| tyrosyl-tRNA synthetase [Clostridium perfringens SM101]
 gi|169344446|ref|ZP_02865415.1| tyrosyl-tRNA synthetase [Clostridium perfringens C str. JGS1495]
 gi|123341956|sp|Q0SVA4|SYY_CLOPS RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|110682618|gb|ABG85988.1| tyrosine--tRNA ligase [Clostridium perfringens SM101]
 gi|169297366|gb|EDS79475.1| tyrosyl-tRNA synthetase [Clostridium perfringens C str. JGS1495]
          Length = 406

 Score =  361 bits (926), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 178/406 (43%), Positives = 261/406 (64%), Gaps = 7/406 (1%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           ++ L  L ERG+I Q ++  E   L  +  VT YIG+D TA SLH GH   +M +  +QK
Sbjct: 2   ANVLDTLMERGYIKQFTHEAETRELLEKEKVTFYIGFDPTADSLHVGHFIAMMFMAHMQK 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+PI+L+GGGT+ IGDPS + + R+MM ++ I  N+  IK     FI +   K  A++
Sbjct: 62  AGHRPIALIGGGTATIGDPSGKTDMRKMMTNETIAHNVACIKKQMEKFIDFSDDK--AIL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  WL +  Y++ LRE+G  FSVNRMLS E  + RL+R   LSFLEFNYM++Q YDF 
Sbjct: 120 VNNADWLLNQNYVEFLREVGVHFSVNRMLSAECFKQRLER--GLSFLEFNYMLMQGYDFY 177

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L K Y+C++++GG DQW N+I G++L  +      +A+T  LLT + G KMGKT++GA+
Sbjct: 178 VLNKKYNCKMELGGDDQWSNMIAGVELVRKKSQKSAYAMTCTLLTNSEGQKMGKTVNGAL 237

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
           WL+ E TSPY F+QYWRN++DADV    K LT +PM E+ R++ L+G +INEAKK++A E
Sbjct: 238 WLDPEKTSPYEFYQYWRNVNDADVEKCLKLLTFIPMDEVRRLSSLEGSQINEAKKVLAFE 297

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           +T +VHG EEA KA  AA   F       ++PT  + KD++  G  LL ++V+A    S 
Sbjct: 298 VTKLVHGEEEATKAKQAAEALFGKGGDMSNVPTYEMGKDKL--GSELLDILVEAEIVPSK 355

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
            E +R +K   + +N   +++ K  ++  DF++ G + +  GKKN+
Sbjct: 356 AEGKRLVKQGGLSLNGEKVADFKKTLEEADFEN-GEVLIKRGKKNY 400


>gi|168204711|ref|ZP_02630716.1| tyrosyl-tRNA synthetase [Clostridium perfringens E str. JGS1987]
 gi|168213835|ref|ZP_02639460.1| tyrosyl-tRNA synthetase [Clostridium perfringens CPE str. F4969]
 gi|182627169|ref|ZP_02954880.1| tyrosyl-tRNA synthetase [Clostridium perfringens D str. JGS1721]
 gi|170663716|gb|EDT16399.1| tyrosyl-tRNA synthetase [Clostridium perfringens E str. JGS1987]
 gi|170714657|gb|EDT26839.1| tyrosyl-tRNA synthetase [Clostridium perfringens CPE str. F4969]
 gi|177907440|gb|EDT70118.1| tyrosyl-tRNA synthetase [Clostridium perfringens D str. JGS1721]
          Length = 406

 Score =  361 bits (926), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 178/406 (43%), Positives = 261/406 (64%), Gaps = 7/406 (1%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           ++ L  L ERG+I Q ++  E   L  +  VT YIG+D TA SLH GH   +M +  +QK
Sbjct: 2   ANVLDTLMERGYIKQFTHEAETRELLEKEKVTFYIGFDPTADSLHVGHFIAMMFMAHMQK 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+PI+L+GGGT+ IGDPS + + R+MM ++ I  N+  IK     FI +   K  A++
Sbjct: 62  AGHRPIALIGGGTATIGDPSGKTDMRKMMTNETIAHNVACIKKQMEKFIDFSDDK--AIL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  WL +  Y++ LRE+G  FSVNRMLS E  + RL+R   LSFLEFNYM++Q YDF 
Sbjct: 120 VNNADWLLNQNYVEFLREVGVHFSVNRMLSAECFKQRLER--GLSFLEFNYMLMQGYDFY 177

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L K Y+C++++GG DQW N+I G++L  +      +A+T  LLT + G KMGKT++GA+
Sbjct: 178 VLNKKYNCKMELGGDDQWSNMIAGVELVRKKSQESAYAMTCTLLTNSEGQKMGKTVNGAL 237

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
           WL+ E TSPY F+QYWRN++DADV    K LT +PM E+ R++ L+G +INEAKK++A E
Sbjct: 238 WLDPEKTSPYEFYQYWRNVNDADVEKCLKLLTFIPMDEVRRLSSLEGSQINEAKKVLAFE 297

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           +T +VHG EEA KA  AA   F       ++PT  + KD++  G  LL ++V+A    S 
Sbjct: 298 VTKLVHGEEEATKAQQAAEALFGKGGDMSNVPTYEMGKDKL--GSELLDILVEAEIVPSK 355

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
            E +R +K   + +N   +++ K  ++  DF++ G + +  GKKN+
Sbjct: 356 AEGKRLVKQGGLSLNGEKVADFKKTLEEADFEN-GEVLIKRGKKNY 400


>gi|110800207|ref|YP_695086.1| tyrosyl-tRNA synthetase [Clostridium perfringens ATCC 13124]
 gi|123148935|sp|Q0TTF4|SYY_CLOP1 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|110674854|gb|ABG83841.1| tyrosyl-tRNA synthetase [Clostridium perfringens ATCC 13124]
          Length = 406

 Score =  361 bits (926), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 178/406 (43%), Positives = 261/406 (64%), Gaps = 7/406 (1%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           ++ L  L ERG+I Q ++  E   L  +  VT YIG+D TA SLH GH   +M +  +QK
Sbjct: 2   ANVLDTLMERGYIKQFTHEAETRELLEKEKVTFYIGFDPTADSLHVGHFIAMMFMAHMQK 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+PI+L+GGGT+ IGDPS + + R+MM ++ I  N+  IK     FI +   K  A++
Sbjct: 62  AGHRPIALIGGGTATIGDPSGKTDMRKMMTNETIAHNVACIKKQMEKFIDFSDDK--AIL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  WL +  Y++ LRE+G  FSVNRMLS E  + RL+R   LSFLEFNYM++Q YDF 
Sbjct: 120 VNNADWLLNQNYVEFLREVGVHFSVNRMLSAECFKQRLER--GLSFLEFNYMLMQGYDFY 177

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L K Y+C++++GG DQW N+I G++L  +      +A+T  LLT + G KMGKT++GA+
Sbjct: 178 VLNKKYNCKMELGGDDQWSNMIAGVELVRKKSQESAYAMTCTLLTNSEGQKMGKTVNGAL 237

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
           WL+ E TSPY F+QYWRN++DADV    K LT +PM E+ R++ L+G +INEAKK++A E
Sbjct: 238 WLDPEKTSPYEFYQYWRNVNDADVEKCLKLLTFIPMDEVRRLSSLEGSQINEAKKVLAFE 297

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           +T +VHG EEA KA  AA   F       ++PT  + KD++  G  LL ++V+A    S 
Sbjct: 298 VTKLVHGEEEATKAKQAAEALFGKGGDMSNVPTYEMGKDKL--GSELLDILVEAEIVPSK 355

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
            E +R +K   + +N   +++ K  ++  DF++ G + +  GKKN+
Sbjct: 356 AEGKRLVKQGGLSLNGEKVADFKKTLEEADFEN-GEVLIKRGKKNY 400


>gi|167040949|ref|YP_001663934.1| tyrosyl-tRNA synthetase [Thermoanaerobacter sp. X514]
 gi|256751928|ref|ZP_05492799.1| tyrosyl-tRNA synthetase [Thermoanaerobacter ethanolicus CCSD1]
 gi|300913840|ref|ZP_07131157.1| tyrosyl-tRNA synthetase [Thermoanaerobacter sp. X561]
 gi|307725474|ref|YP_003905225.1| tyrosyl-tRNA synthetase [Thermoanaerobacter sp. X513]
 gi|166855189|gb|ABY93598.1| tyrosyl-tRNA synthetase [Thermoanaerobacter sp. X514]
 gi|256749233|gb|EEU62266.1| tyrosyl-tRNA synthetase [Thermoanaerobacter ethanolicus CCSD1]
 gi|300890525|gb|EFK85670.1| tyrosyl-tRNA synthetase [Thermoanaerobacter sp. X561]
 gi|307582535|gb|ADN55934.1| tyrosyl-tRNA synthetase [Thermoanaerobacter sp. X513]
          Length = 406

 Score =  361 bits (926), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 178/384 (46%), Positives = 251/384 (65%), Gaps = 6/384 (1%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L +L ERG+I Q+++  E+  L  +  +T YIG+D TA SLH GH  Q+M++  +QK GH
Sbjct: 4   LDVLQERGYIQQMTHEEEIRELLEKEKITFYIGFDPTADSLHVGHFLQIMVMSHMQKAGH 63

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           +PI L+GGGT+++GDPS R + R+++  +EI  N E  K      I +  GK  A+M NN
Sbjct: 64  RPIVLIGGGTAMVGDPSGRTDMRKILTREEINRNAEAFKKQMQRLIDFSDGK--AIMANN 121

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL ++ YI+ LR+IG  FSVNRML+ E  +SRL+R   LSFLEFNYM++QAYDF+EL 
Sbjct: 122 ADWLLNLNYIEFLRDIGVHFSVNRMLTAECFKSRLER--GLSFLEFNYMLMQAYDFLELN 179

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
           K Y+C +QMGG DQW NII GI+L  + +  + + +T  LLTT+ G KMGKT  GA+WL+
Sbjct: 180 KRYNCVMQMGGDDQWSNIIAGIELIRKKEGKQAYGMTFTLLTTSEGKKMGKTEKGAVWLD 239

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITT 308
              TSPY F+QYWRNI DADV      LT LPM E+ R+  L+ KEINEAKK++A E+T 
Sbjct: 240 PNKTSPYEFYQYWRNIADADVEKALALLTFLPMDEVRRLGALKDKEINEAKKVLAYEVTK 299

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
           ++HG EEA KA  AA   F+      ++P++++S D +  G  +L ++ +A    S +E 
Sbjct: 300 LIHGEEEAIKAQKAAEALFESGGDLDNVPSVTVSSDVL--GKKILDVLFEAKIIPSKSEG 357

Query: 369 RRHLKSNAIKINNSIISNEKLQIK 392
           RR ++   + INN  + +    IK
Sbjct: 358 RRLIQQGGLYINNEKVESVDEYIK 381


>gi|118443768|ref|YP_877447.1| tyrosyl-tRNA synthetase [Clostridium novyi NT]
 gi|118134224|gb|ABK61268.1| tyrosyl-tRNA synthetase [Clostridium novyi NT]
          Length = 408

 Score =  360 bits (925), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 176/405 (43%), Positives = 259/405 (63%), Gaps = 7/405 (1%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L ERG+I Q ++  E+  L  +  +T YIG+D TA SLH GH   +M +  +QK 
Sbjct: 5   NVFDTLMERGYIKQTTHEEEIRELLGKEKITFYIGFDPTADSLHVGHFIAMMFMSHMQKA 64

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI+L+GGGT++IGDPS + + R+M+  ++IQ N+  IK   S FI +   K  A+++
Sbjct: 65  GHRPIALVGGGTAMIGDPSGKTDMRKMLSEEQIQANVAGIKKQLSRFIDFSDDK--AILV 122

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL   KY++ +REIG  FSVN+ML+ E  + RL  E+ LSFLEFNYM++QAYDF+E
Sbjct: 123 NNADWLLGAKYVEFIREIGVHFSVNKMLTAECFKQRL--EKGLSFLEFNYMLMQAYDFLE 180

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + Y C +++GG DQW N+I G+DL  R +    FA+T  LLT + G KMGKT+ GA+W
Sbjct: 181 LNRKYGCVMELGGDDQWSNMIAGMDLIRRKERKPAFAMTCSLLTNSEGQKMGKTVGGALW 240

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           L+ E TSPY+F+QYWRN+ DADV      LT +PM E+ R++ L+G  INEAKK++A E+
Sbjct: 241 LDAEKTSPYDFYQYWRNVADADVEKCLSLLTFVPMDEVKRLSSLEGAAINEAKKVLAFEV 300

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
           T +VHG EEA+KA TAA   F+      ++PTI + KD +  G  LL +++      S  
Sbjct: 301 TKLVHGEEEAKKAQTAAEALFNGGADMSNVPTIEVEKDAI--GTSLLEILLNGKAIPSKK 358

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           E RR ++   + +N+  +++    ++  D    G+  +  GKK +
Sbjct: 359 EGRRLIEQGGLYMNDENVTDPNTVLQESDL-KDGSTLIKKGKKKY 402


>gi|291542996|emb|CBL16106.1| tyrosyl-tRNA synthetase [Ruminococcus bromii L2-63]
          Length = 408

 Score =  360 bits (925), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 178/399 (44%), Positives = 259/399 (64%), Gaps = 6/399 (1%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I Q+++  E+  L + G  T YIG+D TA SLH GH   L L+  LQ  G+KPI
Sbjct: 7   LVARGLIAQVTDQEEIRELVNSGKATFYIGFDPTADSLHVGHFMALCLMKRLQMAGNKPI 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GGGT +IGDPS R + R+MM  + IQ N++  K   S FI +  GK  AL++NN  W
Sbjct: 67  ALVGGGTGMIGDPSGRTDMRQMMTKETIQHNVDCFKKQMSRFIDFSDGK--ALLVNNADW 124

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L  + Y++LLR++G+ FSVN ML  E  + R+  E+ LSFLEFNYMI+Q+YDF  L + Y
Sbjct: 125 LLDLNYVELLRDVGACFSVNNMLRAECYKQRM--EKGLSFLEFNYMIMQSYDFYALYQKY 182

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
            C +Q GG DQW N++ G +L  R      +A+T  LL  + G KMGKT SGA+WL+ E 
Sbjct: 183 GCNMQFGGDDQWSNMLGGTELIRRKLGKNAYAMTINLLLNSEGKKMGKTQSGAVWLSAEK 242

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVH 311
           TSPY+F+QYWRN+DD DV+   K LT LP+ EID +AKL+G EIN+AK+I+A E+T +VH
Sbjct: 243 TSPYDFYQYWRNVDDGDVIKCLKMLTFLPLEEIDELAKLEGSEINKAKEILAHELTELVH 302

Query: 312 GREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTNEARR 370
           G+EEA+KA  AA   F    ++ +MP+ ++++ + + G +G+L L+ K G   S  E RR
Sbjct: 303 GKEEADKAQEAARAIFSNKTNTDNMPSTTLTEADFADGEIGILDLMKKCGLIPSNGEGRR 362

Query: 371 HLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
            ++   + +++  +++   ++   DF+  G + +  GKK
Sbjct: 363 LIQQGGVSVDDEKVTDVYAKVAKSDFEK-GYVVIKKGKK 400


>gi|253582534|ref|ZP_04859756.1| tyrosyl-tRNA synthetase [Fusobacterium varium ATCC 27725]
 gi|251835679|gb|EES64218.1| tyrosyl-tRNA synthetase [Fusobacterium varium ATCC 27725]
          Length = 406

 Score =  360 bits (925), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 178/405 (43%), Positives = 257/405 (63%), Gaps = 7/405 (1%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +   +L  RG++ Q ++  E+  +  +  VT YIG+D TA SLH GH   +M +  +QK 
Sbjct: 3   NVFDVLVGRGYLKQFTHEEEMREILGKEKVTFYIGFDPTADSLHVGHFIAMMFMSHMQKH 62

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI+L+GGGT++IGDPS R + R MM  + I  N+  IK     FI +  GK  A++ 
Sbjct: 63  GHRPIALLGGGTAMIGDPSGRTDMRTMMSKETIAHNVAAIKKQMEKFIDFSDGK--AILE 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  + YID +R+IG+ FSVNRML+ E  +SR+  E  LSFLEFNYM++Q YDF+ 
Sbjct: 121 NNADWLLGLNYIDFIRDIGAHFSVNRMLAAECFKSRM--EVGLSFLEFNYMLMQGYDFLV 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + + C +Q+GG DQW N+I G++L  + +  + FA+T  LLT + G KMGKT  GA+W
Sbjct: 179 LNQKHGCTMQLGGDDQWSNMIAGVELIRKKEQKQAFAMTCTLLTNSEGKKMGKTAKGALW 238

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           L+ E TSPY F+QYWRN+DDADV      LT +PM E+ R++ L+G EINEAKKI+A EI
Sbjct: 239 LDPEKTSPYEFYQYWRNVDDADVEKCLSLLTFIPMDEVKRLSALEGAEINEAKKILAFEI 298

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
           T M+HG EEA KA TAA   F        +P++ I  +E   G+GL+  +V+ G   + +
Sbjct: 299 TKMIHGEEEALKAKTAAEALFGGGQDMSSVPSVEI--EEAVLGIGLIDFLVEKGILKTKS 356

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           E RR ++ N + I +S +++  + I  +D  + G   +  GKK +
Sbjct: 357 EGRRLVQQNGLNIGDSKVTDFTMPIT-KDLFANGEFLVKIGKKKY 400


>gi|170758393|ref|YP_001788639.1| tyrosyl-tRNA synthetase [Clostridium botulinum A3 str. Loch Maree]
 gi|254783589|sp|B1L203|SYY_CLOBM RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|169405382|gb|ACA53793.1| tyrosine--tRNA ligase [Clostridium botulinum A3 str. Loch Maree]
          Length = 407

 Score =  360 bits (923), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 178/406 (43%), Positives = 265/406 (65%), Gaps = 8/406 (1%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+   IL ERG+I Q+++  E+  L  +  ++ YIG+D TA SLH GH  Q+M++  +QK
Sbjct: 2   SNVYDILKERGYIKQLTHEEEIRELLGKEKISFYIGFDPTADSLHVGHFLQMMVMAHMQK 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+PI+L+GGGT +IGDP+ + + R+MM  ++I+ N    K   +  I +   K  A+M
Sbjct: 62  AGHRPIALVGGGTGMIGDPTGKTDMRKMMTKEQIEYNCNCFKKQLAKIIDFSEDK--AIM 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  WL ++ YI+ LREIG  FSVN+ML+ E  +SRL  E+ LSFLEFNYM++Q YDF+
Sbjct: 120 VNNADWLLNLNYIEFLREIGVHFSVNKMLTAECFKSRL--EKGLSFLEFNYMLMQGYDFL 177

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           EL + Y+C +++GG DQW NI+ G+DL  R ++   + +T  LLT + G KMGKT SGA+
Sbjct: 178 ELNRKYNCVMELGGDDQWSNILAGVDLIRRKESKSAYGMTFTLLTNSEGKKMGKTESGAL 237

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
           WL+ E TSPY F+QYWRN+ DADV    + +T LPM E+ R++ L+G EINEAK+++A E
Sbjct: 238 WLDPEKTSPYEFYQYWRNVADADVEKCLRLITFLPMDEVRRLSSLEGAEINEAKRVLAFE 297

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHS-QHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           +T ++HG EEA+KA  AA   F  ++    +MPT  I KD+++    L+ L+ K     S
Sbjct: 298 VTKLIHGEEEAQKAKVAAEALFGGNVKDLGNMPTAYIDKDDLNN--SLVDLLAKCEILPS 355

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            +EARR +K   + +N+  +++  L +  +     G I +  GKKN
Sbjct: 356 KSEARRLIKQGGLYVNDEKVTDINLVLTEEHVTEDG-IMIRRGKKN 400


>gi|20809023|ref|NP_624194.1| tyrosyl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4]
 gi|81480271|sp|Q8R6V5|SYY_THETN RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|20517693|gb|AAM25798.1| Tyrosyl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4]
          Length = 406

 Score =  359 bits (921), Expect = 5e-97,   Method: Compositional matrix adjust.
 Identities = 176/378 (46%), Positives = 253/378 (66%), Gaps = 6/378 (1%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L +L ERG+I Q+++  E++ L  +  +T YIG+D TA SLH GHL Q+M +  +Q+ GH
Sbjct: 4   LEVLKERGYIAQMTHEEEIEKLLEKEKITFYIGFDPTADSLHVGHLIQIMTMAHMQRAGH 63

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           +PI L+GGGT++IGDPS R + R+M+  +EI  N E  K     FI +  GK  A+M NN
Sbjct: 64  RPIVLLGGGTALIGDPSGRTDMRKMLTKEEIDRNAEAFKKQMERFIDFSEGK--AIMENN 121

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL  + YI+ LR+IG  F+VNRML  E+ ++R++R   L+FLEFNYM++QAYDF+EL 
Sbjct: 122 AKWLLGLNYIEFLRDIGVHFTVNRMLEAEAFKTRMER--GLTFLEFNYMLMQAYDFLELY 179

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
           + Y C +QMGG+DQW NII G++L  + +  + + +T  LLTT+ G KMGKT  GAIWL+
Sbjct: 180 RRYGCVMQMGGNDQWSNIIAGVELIRKKEGKQAYGMTFVLLTTSEGKKMGKTEKGAIWLD 239

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITT 308
            + TSPY F+QYWRNI DADV      LT LPM E+ R+ +L+ KEINEAKK++A E+T 
Sbjct: 240 PKKTSPYEFYQYWRNIGDADVEKALALLTFLPMDEVRRLGRLRDKEINEAKKVLAFEVTK 299

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
           +VHG EEA KA  AA   F+     +H+P+I +S+D + R   ++ ++ +A    S +E 
Sbjct: 300 LVHGEEEALKAQKAAEALFEGGGEMEHVPSIEVSQDIIGR--KIVDVLFEAKVIPSKSEG 357

Query: 369 RRHLKSNAIKINNSIISN 386
           RR ++   + IN+  + N
Sbjct: 358 RRLIQQGGLYINDKRVEN 375


>gi|257470783|ref|ZP_05634873.1| tyrosyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185]
 gi|317064988|ref|ZP_07929473.1| tyrosyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185]
 gi|313690664|gb|EFS27499.1| tyrosyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185]
          Length = 406

 Score =  358 bits (920), Expect = 6e-97,   Method: Compositional matrix adjust.
 Identities = 176/405 (43%), Positives = 258/405 (63%), Gaps = 7/405 (1%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +   +L  RG++ Q ++  E+  +  +  VT YIG+D TA SLH GH   +M +  +QK 
Sbjct: 3   NVFDVLVGRGYLKQFTHEEEMREILGKEKVTFYIGFDPTADSLHVGHFIAMMFMSHMQKH 62

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI+L+GGGT++IGDPS R + R MM  + I  N+  IK     FI +  GK  A++ 
Sbjct: 63  GHRPIALLGGGTAMIGDPSGRTDMRTMMSKETIAHNVASIKKQMEKFIDFSDGK--AILE 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  + Y+D +R+IG+ FSVNRML+ E  +SR+  E  LSFLEFNYM++Q YDF+ 
Sbjct: 121 NNADWLLGLNYVDFIRDIGAHFSVNRMLAAECFKSRM--EAGLSFLEFNYMLMQGYDFLV 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + + C +Q+GG DQW N+I G++L  + +  + FA+T  LLT + G KMGKT  GA+W
Sbjct: 179 LNQKHGCTMQLGGDDQWSNMIAGVELIRKKEQKQAFAMTCTLLTNSEGKKMGKTAKGALW 238

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           L+ E TSPY F+QYWRN+DDADV      LT +PM E+ R++ L+G EINEAKKI+A EI
Sbjct: 239 LDPEKTSPYEFYQYWRNVDDADVEKCLSLLTFIPMDEVKRLSALEGAEINEAKKILAFEI 298

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
           T M+HG EEA KA TAA   F       ++P++ I  +E + G GL+  +V+ G   + +
Sbjct: 299 TKMIHGEEEALKAKTAAEALFGGGQDMSNVPSVEI--EESALGTGLVDFLVEKGILKTKS 356

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           E RR ++ N + + +S +++  + I  + F + G   +  GKK +
Sbjct: 357 EGRRLVQQNGLNVGDSKVTDFAMPITKELF-TDGEFLVKIGKKKY 400


>gi|15893925|ref|NP_347274.1| tyrosyl-tRNA synthetase [Clostridium acetobutylicum ATCC 824]
 gi|81531026|sp|Q97LC5|SYY1_CLOAB RecName: Full=Tyrosyl-tRNA synthetase 1; AltName:
           Full=Tyrosine--tRNA ligase 1; Short=TyrRS 1
 gi|15023510|gb|AAK78614.1|AE007579_4 Tyrosyl-tRNA synthetase [Clostridium acetobutylicum ATCC 824]
 gi|325508052|gb|ADZ19688.1| tyrosyl-tRNA synthetase [Clostridium acetobutylicum EA 2018]
          Length = 407

 Score =  358 bits (919), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 175/406 (43%), Positives = 262/406 (64%), Gaps = 6/406 (1%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ L  L ERG+  Q ++  E   L S+  VT YIG+D T  SLH GH   LML+  +QK
Sbjct: 2   SNVLDELIERGYAKQFTHEEETRKLLSEEKVTFYIGFDPTGDSLHVGHFIALMLMARMQK 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+PI L+GGGT+++GDP+ + + R+M+  +EI  N+E +K   S FI +   K  A++
Sbjct: 62  AGHRPIVLIGGGTAMVGDPTGKTDMRKMLTREEINHNVECLKKQMSRFIDFSDDK--AII 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  WL    YI+ LRE+G  FSVN+ML+ E  + R+  E+ LSFLEFNYM++Q +DF 
Sbjct: 120 VNNAEWLMGQNYIEFLREVGVHFSVNKMLTAECFKQRM--EKGLSFLEFNYMLMQGFDFY 177

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           +L + YDC++++GG DQW N+I G++L  R    K +A+TS LLT + G KMGKT  GA+
Sbjct: 178 KLNEKYDCKMELGGDDQWSNMIAGVELIRRKSNKKAYAMTSALLTNSEGKKMGKTEKGAL 237

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
           WL+ E TSPY+F+QYWRN++DADV      LT LPM E+ R+A L+ +EIN+AK+++A E
Sbjct: 238 WLDAEKTSPYDFFQYWRNVNDADVEKCLSMLTFLPMDEVRRLASLKDQEINKAKEVLAYE 297

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           +T +VHG EEA+KA  ++   F    +  ++PT+SI +D +S    +L ++V      S 
Sbjct: 298 VTKLVHGEEEAKKALNSSKALFGGGTNMDNVPTVSIPEDMLSS--SILDVLVHTKIIPSK 355

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
            E RR ++   I +N++ + +   +I  +DF+  G   +  GKK +
Sbjct: 356 GEGRRLVQQGGITLNDTKVEDFNYEITKEDFNDDGFALVRRGKKKY 401


>gi|255994648|ref|ZP_05427783.1| tyrosine--tRNA ligase [Eubacterium saphenum ATCC 49989]
 gi|255993361|gb|EEU03450.1| tyrosine--tRNA ligase [Eubacterium saphenum ATCC 49989]
          Length = 418

 Score =  357 bits (916), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 177/404 (43%), Positives = 257/404 (63%), Gaps = 5/404 (1%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
            +   +L ERGFI Q ++  E+  L +   +  YIG+D TA SLH GH  Q++++ ++QK
Sbjct: 12  ENVFDVLKERGFIEQTTHEDEIRELLANQKIKFYIGFDPTADSLHVGHFMQIIIMMYMQK 71

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH PI L+GGGT ++GDPS R + R+MM  + ++E+  K + +F  FI +   K  A+ 
Sbjct: 72  FGHTPIVLVGGGTGMVGDPSGRTDMRKMMTVETVREHCRKFEKLFERFIDFSDNK--AIA 129

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  WL ++ YID LREIGS FSVNRMLS E  + RLK+   LSFLEFNYM++QAYDF+
Sbjct: 130 INNADWLMNLNYIDFLREIGSQFSVNRMLSAECFKQRLKK--GLSFLEFNYMLMQAYDFL 187

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L +N DC++Q GG DQW NI+ G+DL  R +  ++F +T  LLT + G KMGKT SGA+
Sbjct: 188 VLYRNLDCKMQFGGDDQWSNILAGVDLVRRKEQGQVFGMTFSLLTNSQGKKMGKTASGAL 247

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
           WL+   TS Y F+QYWRN++D DV    K LT LP+ EI+ M   +G+ IN+AK+++A E
Sbjct: 248 WLDANKTSAYEFYQYWRNVEDEDVKKCLKMLTFLPIEEIEAMTCEKGENINKAKEVLAYE 307

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           +T +VHG E A+   TA    F      +++PT  I++DE   G+GL+ L+ +A   +S 
Sbjct: 308 VTKLVHGEEVAKNTETAVKAAFSGEGDLENLPTTVITEDEAKSGIGLIDLMKRAELISSN 367

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
           +E  R +K   + I +  + + K  I   DF S  ++ +  GKK
Sbjct: 368 SEGFRLVKQGGVSIGDVKVEDGKRIITEGDF-SDNSLVIKKGKK 410


>gi|329850515|ref|ZP_08265360.1| tyrosyl-tRNA synthetase [Asticcacaulis biprosthecum C19]
 gi|328840830|gb|EGF90401.1| tyrosyl-tRNA synthetase [Asticcacaulis biprosthecum C19]
          Length = 370

 Score =  357 bits (916), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 171/367 (46%), Positives = 242/367 (65%), Gaps = 10/367 (2%)

Query: 58  MLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG 117
           M+L WLQKTGHKPI LMGGGT+ +GDPS +D  R+++   +I EN+  IK +F+ F+ + 
Sbjct: 1   MMLRWLQKTGHKPIVLMGGGTTKVGDPSGKDTQRQLLDDAKIAENLNGIKQVFTKFLTFE 60

Query: 118 T---GKTD---ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSF 171
           +   G TD   A+M+NN+ WL    YI+ LR  G  F++NRM++F+SV+ RL+REQ L+F
Sbjct: 61  SVQGGHTDSNAAIMVNNDDWLSQYGYIEFLRTFGPHFTINRMMTFDSVKLRLEREQPLTF 120

Query: 172 LEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL----GERLKTPKLFALTSP 227
           LEFNYM++QA DF EL    +C LQMGGSDQWGNII G++L    GE  +    F LT+P
Sbjct: 121 LEFNYMLMQAVDFRELNLRQNCVLQMGGSDQWGNIINGVELTRRMGEGREGAHAFGLTTP 180

Query: 228 LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM 287
           LLT+ASG KMGKT SGA+WLN ++ SPY++WQYWRN +D DV  F +  T LP+ EI R+
Sbjct: 181 LLTSASGAKMGKTASGAVWLNADLLSPYDYWQYWRNAEDKDVGRFLRLFTELPLDEIARL 240

Query: 288 AKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVS 347
             L+G EIN+AKK++A E T ++HG E A  A   A + F+  + S  +PT+ I +  + 
Sbjct: 241 EALEGAEINDAKKVLADEATRLLHGDEAAATARDTAQKAFEQGVLSADLPTVEIERAVLD 300

Query: 348 RGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFG 407
            G+ L  L  K G  +S  EARR  +   +++N+  I++    +   D ++ G IK+S G
Sbjct: 301 EGIMLAALATKIGLTSSNGEARRLAQGGGLRVNDLAITDGNQLVTAMDLNADGVIKVSQG 360

Query: 408 KKNHIIC 414
           KK  ++ 
Sbjct: 361 KKKILLV 367


>gi|255526011|ref|ZP_05392935.1| tyrosyl-tRNA synthetase [Clostridium carboxidivorans P7]
 gi|296184759|ref|ZP_06853170.1| tyrosyl-tRNA synthetase [Clostridium carboxidivorans P7]
 gi|255510271|gb|EET86587.1| tyrosyl-tRNA synthetase [Clostridium carboxidivorans P7]
 gi|296050541|gb|EFG89964.1| tyrosyl-tRNA synthetase [Clostridium carboxidivorans P7]
          Length = 406

 Score =  357 bits (916), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 185/406 (45%), Positives = 265/406 (65%), Gaps = 7/406 (1%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           ++    L ERG+I Q+++  E+  L  +  VT YIG+D TA SLH GH  Q+M++  +Q+
Sbjct: 2   ANVYDTLMERGYIKQVTHEEEVRDLLGKEKVTFYIGFDPTADSLHVGHFLQMMVMAHMQR 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+PI+L+GGGT+++GDPS + + R+M+  ++IQ N E  K  FS  + +   K  A+M
Sbjct: 62  AGHRPIALLGGGTAMVGDPSGKTDMRKMLTKEQIQHNAECFKNQFSVLVDFDNDK--AIM 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
            NN  WL ++ Y+D LRE+G  FSVNRML+ E  + RL  E+ LSFLEFNYM++Q YDF+
Sbjct: 120 ANNADWLLNLNYVDFLREVGVHFSVNRMLTAECFKQRL--EKGLSFLEFNYMLMQGYDFL 177

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           EL + Y C LQ+GG DQW NII G DL  R ++   + +T  LLT + G KMGKT  GA+
Sbjct: 178 ELNRRYGCVLQLGGDDQWSNIIAGADLIRRKESKPAYGMTFALLTNSEGKKMGKTEKGAL 237

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
           WLNKE TSPY F+QYWRN+ D+DV      LT LPM E+ R+  LQ  EINEAKK++A E
Sbjct: 238 WLNKEKTSPYEFYQYWRNVADSDVEKCLALLTFLPMDEVRRLGLLQDAEINEAKKVLAYE 297

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           +T +VHG+EEAEKA  AA   F      +++PT+ I++DE+  G  ++ LIV      S 
Sbjct: 298 VTKIVHGKEEAEKAKAAAEALFAGGASMENVPTVEITEDEL--GCTVIDLIVNTKILPSK 355

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           +EARR ++   + IN+  I++  + I   +F+   ++ +  GKKN+
Sbjct: 356 SEARRLVQQGGLTINDEKITDANMVITKANFNDK-SMLIRRGKKNY 400


>gi|167770729|ref|ZP_02442782.1| hypothetical protein ANACOL_02075 [Anaerotruncus colihominis DSM
           17241]
 gi|167667324|gb|EDS11454.1| hypothetical protein ANACOL_02075 [Anaerotruncus colihominis DSM
           17241]
          Length = 408

 Score =  357 bits (915), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 176/399 (44%), Positives = 264/399 (66%), Gaps = 6/399 (1%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L+ RG I Q+++P +++ L +   VT YIG+D TA SLH GH  Q++++  LQ+ GH+PI
Sbjct: 7   LTRRGLIAQMTHPEKIEELLNGEKVTFYIGFDATADSLHVGHFLQMVVMKRLQQAGHRPI 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+G GT+++GDP+ + + R+M+  +EI  N    K     FI +  GK  ALML N  W
Sbjct: 67  ALLGTGTTMVGDPTGKTDMRKMLSVEEINHNAMCFKRQMEKFIDFSDGK--ALMLKNGDW 124

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L  + YI+LLR++G  FSVN ML+ E  ++RL  E+ LSF+EFNYMI+Q+YDF++L ++Y
Sbjct: 125 LLHLNYIELLRDVGVHFSVNEMLTAECFKTRL--EKGLSFIEFNYMIMQSYDFLKLHRDY 182

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
            C +Q+GG+DQW NI+ GI L  R+    ++ +T  LLTT  G KMGKT +GA+WL+ E 
Sbjct: 183 GCMMQLGGNDQWANILGGIKLTRRVTGDDVYGMTFTLLTTKEGKKMGKTENGAVWLDPEK 242

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVH 311
           TSPY F+QYWRN+ D DV++  K LT +P+ EI+ M K +G ++N+AK+I+A E+T MVH
Sbjct: 243 TSPYEFFQYWRNVADDDVINCLKLLTFVPIEEIEAMEKWEGSQLNKAKEILAHELTKMVH 302

Query: 312 GREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTNEARR 370
           G++EA+KA  AA   F    HS  MPT S+   +++ G + +  L+VK G A S  EA+R
Sbjct: 303 GQQEADKALEAARAIFAGGTHSDDMPTTSLVSSDLADGAISVADLLVKTGLAPSKGEAKR 362

Query: 371 HLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
            ++   + +++  +S+    I  + FD  G + L  GKK
Sbjct: 363 LIQQGGVSVDDVKVSDFAAVIGKESFDK-GQVILKKGKK 400


>gi|164688146|ref|ZP_02212174.1| hypothetical protein CLOBAR_01791 [Clostridium bartlettii DSM
           16795]
 gi|164602559|gb|EDQ96024.1| hypothetical protein CLOBAR_01791 [Clostridium bartlettii DSM
           16795]
          Length = 408

 Score =  356 bits (914), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 172/376 (45%), Positives = 250/376 (66%), Gaps = 4/376 (1%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L ERG I Q+++  EL  L + G  T YIG+D TA SLH GH   L L+  LQ +G++PI
Sbjct: 7   LVERGLIAQVTDEDELKELINAGKATFYIGFDATADSLHVGHFMALCLMKRLQMSGNRPI 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GGGT++IGDPS R + R+MM  + I  N E  K   S FI +   K  A+++NN  W
Sbjct: 67  ALVGGGTTMIGDPSGRSDMRQMMTPEMINHNCECFKKQMSKFIDFSDDK--AVLVNNADW 124

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L  + Y+D+LRE+GS FSVNRMLS E  + R+ RE  L+FLEFNYMI+QAYDF +L + Y
Sbjct: 125 LLDLNYVDVLREVGSCFSVNRMLSAECYKQRMDREGGLTFLEFNYMIMQAYDFYQLYQKY 184

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
            C++Q+GG+DQW N++ G DL  R      +A+T  LL  + G KMGKT SGA+WL+   
Sbjct: 185 GCQMQLGGNDQWSNMLAGTDLIRRKLGENAYAMTITLLLNSEGKKMGKTQSGAVWLDPNK 244

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVH 311
           TSP+ F+QYWRN+ DADV+   K LT LP+ EI  M K +G E+N+AK+I+A E+TT+VH
Sbjct: 245 TSPFEFYQYWRNVSDADVIKCLKMLTFLPLEEIKEMEKWEGSELNKAKEILAYELTTLVH 304

Query: 312 GREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTNEARR 370
             E+A+ A  +A   F    ++ +MPT+ ++  ++  G + +++L+VKA  A S +EARR
Sbjct: 305 SEEDAKAAQESARALFSQG-NAANMPTVELADSDLEDGKIDIISLLVKADLAPSRSEARR 363

Query: 371 HLKSNAIKINNSIISN 386
           +++   + +N   +++
Sbjct: 364 NIQQGGVSVNGEKVTD 379


>gi|154483552|ref|ZP_02026000.1| hypothetical protein EUBVEN_01256 [Eubacterium ventriosum ATCC
           27560]
 gi|149735462|gb|EDM51348.1| hypothetical protein EUBVEN_01256 [Eubacterium ventriosum ATCC
           27560]
          Length = 408

 Score =  356 bits (914), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 179/400 (44%), Positives = 251/400 (62%), Gaps = 4/400 (1%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I Q+++   +  L ++G    YIG+D TA SLH GH   L L+  LQ  G+KPI
Sbjct: 7   LKARGLIAQVTDEERISDLINKGEAVFYIGFDPTADSLHVGHFMALCLMKRLQMAGNKPI 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GGGT++IGDPS + + R+MM  + I  N+E  K   S FI +  GK  AL++NN  W
Sbjct: 67  ALIGGGTAMIGDPSGKTDMRKMMTKETINHNVECFKKQMSKFIDFSDGK--ALLVNNADW 124

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L  + YID+LRE+G  FSVNRML+ E  + R++R   LSFLEFNYMI+Q+YDF  L K+Y
Sbjct: 125 LLDLNYIDVLREVGPHFSVNRMLTAECYKQRMER--GLSFLEFNYMIMQSYDFYRLYKDY 182

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
            C LQ GG DQW N++ G +L  R       A+T  LL  + G KMGKT+SGA+WL+ E 
Sbjct: 183 GCNLQFGGDDQWSNMLGGTELIRRKLGEDASAMTITLLLNSEGKKMGKTVSGAVWLDAEK 242

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVH 311
           TSP+ F+QYWRN+DDADVV   K LT LP+ EI++M + QG E+N+AK+I+A E T +VH
Sbjct: 243 TSPFEFYQYWRNVDDADVVKCLKMLTFLPLEEIEKMEQWQGSELNKAKEILAYEHTKLVH 302

Query: 312 GREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRH 371
           G EEAEKA  A+   F     +  +PT + +K ++  G  +LTL+V    A S  EARR 
Sbjct: 303 GEEEAEKAQIASRNLFAGGGVTGDIPTTTYAKADLDEGKDILTLLVDTKLAASRGEARRL 362

Query: 372 LKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           ++   + +N   ++         +F+    + +  GKK++
Sbjct: 363 VQQGGVSVNGEKVAAIDKTFTTAEFNEEAALLIKKGKKSY 402


>gi|168182052|ref|ZP_02616716.1| tyrosine--tRNA ligase [Clostridium botulinum Bf]
 gi|237796763|ref|YP_002864315.1| tyrosyl-tRNA synthetase [Clostridium botulinum Ba4 str. 657]
 gi|259516967|sp|C3KUT7|SYY_CLOB6 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|182674819|gb|EDT86780.1| tyrosine--tRNA ligase [Clostridium botulinum Bf]
 gi|229263527|gb|ACQ54560.1| tyrosine--tRNA ligase [Clostridium botulinum Ba4 str. 657]
          Length = 407

 Score =  356 bits (914), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 177/402 (44%), Positives = 262/402 (65%), Gaps = 8/402 (1%)

Query: 10  SILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
            IL ERG+I Q+++  E+  L  +  ++ YIG+D TA SLH GH  Q+M++  +QK GH+
Sbjct: 6   DILKERGYIKQLTHEEEIRELLGKEKISFYIGFDPTADSLHVGHFLQMMVMAHMQKAGHR 65

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
           PI+L+GGGT +IGDP+ + + R+MM  ++I+ N    K   +  I +   K  A+M+NN 
Sbjct: 66  PIALVGGGTGMIGDPTGKTDMRKMMTKEQIEYNCNCFKKQLAKIIDFSEDK--AIMVNNA 123

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
            WL ++ YI+ LREIG  FSVN+ML+ E  +SRL  E+ LSFLEFNYM++Q YDF+EL +
Sbjct: 124 DWLLNLNYIEFLREIGVHFSVNKMLTAECFKSRL--EKGLSFLEFNYMLMQGYDFLELNR 181

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
            Y+C +++GG DQW NI+ G+DL  R ++   + +T  LLT + G KMGKT SGA+WL+ 
Sbjct: 182 KYNCVMELGGDDQWSNILAGVDLIRRKESKSAYGMTFTLLTNSEGKKMGKTESGALWLDP 241

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTM 309
           E TSPY F+QYWRN+ DADV    + +T LPM E+ R++ L+G EINEAK+++A E+T +
Sbjct: 242 EKTSPYEFYQYWRNVADADVEKCLRLITFLPMDEVRRLSSLEGAEINEAKRVLAFEVTKL 301

Query: 310 VHGREEAEKAATAAMECFDMSIHS-QHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
           +HG EEA+KA  AA   F  +     +MPT  I KD+++    L+ L+ K     S +EA
Sbjct: 302 IHGEEEAQKAKVAAEALFGGNAKDLGNMPTAYIDKDDLNN--PLVDLLAKCEILPSKSEA 359

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
           RR +K   + +N+  +++  L +  +     G I +  GKKN
Sbjct: 360 RRLIKQGGLYVNDEKVTDINLVLTEEHVTEDG-IMIRRGKKN 400


>gi|225572274|ref|ZP_03781138.1| hypothetical protein RUMHYD_00568 [Blautia hydrogenotrophica DSM
           10507]
 gi|225040258|gb|EEG50504.1| hypothetical protein RUMHYD_00568 [Blautia hydrogenotrophica DSM
           10507]
          Length = 422

 Score =  356 bits (914), Expect = 4e-96,   Method: Compositional matrix adjust.
 Identities = 176/401 (43%), Positives = 263/401 (65%), Gaps = 7/401 (1%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I Q+++ +E+  L + G  T YIG+D TA SLH GH   L L+  LQ  G++PI
Sbjct: 20  LQARGLIAQVTDEKEIRELVNAGKATFYIGFDPTADSLHVGHFMALCLMKRLQMAGNRPI 79

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GGGT ++GDPS R + R MM    I  NIE  K   S FI++G GK  A+M+NN  W
Sbjct: 80  ALLGGGTGMVGDPSGRTDMRPMMTVDTINHNIECFKKQMSRFIEFGEGK--AIMVNNADW 137

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L  + Y++LLRE+G+ FSVNRML+ E  + R+K  + LSF EFNYMI+Q+YDF  L  ++
Sbjct: 138 LLDLNYVELLREVGAHFSVNRMLAAECYKQRMK--EGLSFFEFNYMIMQSYDFYRLFLDH 195

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
            C++Q GG DQW N++ G +L  R      +A+T  LL  + G KMGKT SGA+WL+ + 
Sbjct: 196 GCQMQFGGDDQWSNMLAGTELIRRKLGENAYAMTQTLLLNSEGKKMGKTQSGAVWLDPDK 255

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVH 311
           T+P+ F+QYWRN+DDADV+   + LT LP+ +ID M K +G ++N+AK+I+A E+T +VH
Sbjct: 256 TTPFEFYQYWRNVDDADVLHCLRLLTFLPLEQIDEMDKWEGSQLNQAKEILAHELTALVH 315

Query: 312 GREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTNEARR 370
           G +EA+KA   A   F  S  S+H+PT+ +S+++++ G + +++L++KA    + NE RR
Sbjct: 316 GEDEAQKAEAGAKALFTGSGDSEHIPTVELSEEDLTDGEIDIISLLIKAELVGTRNEGRR 375

Query: 371 HLKSN-AIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            +  N  + I+   I++ K Q+K +  +  G I +  GKK+
Sbjct: 376 AITPNTCVTIDGEKIADIKYQVKKEALEGDG-ILVGKGKKS 415


>gi|304317642|ref|YP_003852787.1| tyrosyl-tRNA synthetase [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302779144|gb|ADL69703.1| tyrosyl-tRNA synthetase [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 405

 Score =  356 bits (913), Expect = 4e-96,   Method: Compositional matrix adjust.
 Identities = 179/403 (44%), Positives = 257/403 (63%), Gaps = 7/403 (1%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
             +L ER FI Q+++  E+  L  +  VT YIG+D TA SLH GH  QLM++  +Q+ GH
Sbjct: 4   FDVLKERNFIQQMTHEDEIKGLLEKEKVTFYIGFDPTADSLHVGHFLQLMVMAHMQRAGH 63

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           +PI L+GGGT+++GDP+ + + R+M+  +EI  N E  K   S FI +  GK  A++ NN
Sbjct: 64  RPIVLIGGGTAMVGDPTGKTDMRKMLTKEEISHNAEAFKKQMSRFIDFSDGK--AILANN 121

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL ++ Y++ LR+IG  FSVN+ML+ E  ++RL+R   LSFLEFNYM++QAYDF+ L 
Sbjct: 122 ADWLLNLNYVEFLRDIGVHFSVNKMLTAECFKTRLER--GLSFLEFNYMLMQAYDFLMLN 179

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
           K Y C L+MGG DQW NI+ G+DL  R +  + + +T  LLTT+ G KMGKT  GAIWL+
Sbjct: 180 KEYGCVLEMGGDDQWSNILAGVDLVRRKEGKQAYGMTFTLLTTSEGKKMGKTEKGAIWLD 239

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITT 308
            E T PY+F+QYWRNIDD+DV      LT LPM E+ R+  L+ KEINEAKK++A E+T 
Sbjct: 240 AEKTPPYDFYQYWRNIDDSDVEKCLSLLTFLPMDEVRRLGSLKDKEINEAKKVLAYEVTK 299

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
           +VHG +EA KA  AA   F+ S    ++PT  I+ D +  G  LL ++ K     S +E 
Sbjct: 300 LVHGEDEARKAQKAAEALFEGSGDLSNVPTSIITHDML--GSSLLDVLTKTNIIPSKSEG 357

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           RR +    + +N+  + +    +  +D    G + +  GKK++
Sbjct: 358 RRLITQGGLYVNDENVKDIN-AVVTEDMFKQGYMLVRKGKKSY 399


>gi|168185553|ref|ZP_02620188.1| tyrosyl-tRNA synthetase [Clostridium botulinum C str. Eklund]
 gi|169296217|gb|EDS78350.1| tyrosyl-tRNA synthetase [Clostridium botulinum C str. Eklund]
          Length = 408

 Score =  356 bits (913), Expect = 5e-96,   Method: Compositional matrix adjust.
 Identities = 179/406 (44%), Positives = 259/406 (63%), Gaps = 9/406 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L ERG+I Q ++  E+  L  +  +T YIG+D TA SLH GH   +M +  +QK 
Sbjct: 5   NVFDTLMERGYIKQTTHEEEIRELLGKEKITFYIGFDPTADSLHVGHFIAMMFMAHMQKA 64

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI+L+GGGT++IGDPS + + R+M+  ++I  ++  IK   S FI +  GK  A+++
Sbjct: 65  GHRPIALVGGGTAMIGDPSGKTDMRKMLTKEQIDIHVAGIKKQLSRFIDFSDGK--AILV 122

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL   KY++ +REIG  FSVN+ML+ E  + RL  E+ LSFLEFNYM++QAYDF+E
Sbjct: 123 NNADWLLDAKYVEFIREIGVHFSVNKMLTAECFKQRL--EKGLSFLEFNYMLMQAYDFLE 180

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + Y C +++GG DQW N+I G+DL  R +    FA+T  LLT + G KMGKT+ GA+W
Sbjct: 181 LNRKYGCIMELGGDDQWSNMIAGMDLIRRKERKPAFAMTCSLLTNSEGQKMGKTVGGALW 240

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           LN E TSPY+F+QYWRN+ DADV      LT +PM E+ R++ L+G  INEAKK++A E+
Sbjct: 241 LNAEKTSPYDFYQYWRNVADADVEKCLSLLTFVPMDEVRRLSSLEGSAINEAKKVLAFEV 300

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
           T +VHG EEA+KA TAA   F       ++PTI I K+ V  G  LL +++      S  
Sbjct: 301 TKLVHGEEEAKKAQTAAEALFSGGADMSNVPTIEIEKEAV--GTLLLEILLNGKAIPSKK 358

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFD-STGNIKLSFGKKNH 411
           E RR ++   + +N+  +++      LQ+ D   G+  +  GKK +
Sbjct: 359 EGRRLIEQGGLYMNDENVTDS--NTVLQELDLKDGSALIKKGKKKY 402


>gi|253578840|ref|ZP_04856111.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
 gi|251849783|gb|EES77742.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
          Length = 409

 Score =  354 bits (909), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 172/382 (45%), Positives = 248/382 (64%), Gaps = 6/382 (1%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I Q+++  E+  + + G  T YIG+D TA SLH GH   L L+  LQ  G+KPI
Sbjct: 7   LKARGLIAQVTDEEEIKEMVNNGKATFYIGFDPTADSLHVGHFMALCLMKRLQMAGNKPI 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GGGT +IGDPS R + R+MM  + IQ NI+  K     FI +  GK  ALM+NN  W
Sbjct: 67  ALLGGGTGMIGDPSGRSDMRQMMTVETIQHNIDCFKKQMERFIDFSDGK--ALMVNNADW 124

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L ++ Y+++LR++G  FSVNRMLS E  + R++R   L+FLEFNYMI+Q+YDF  L + Y
Sbjct: 125 LMNLNYVEVLRDVGPHFSVNRMLSHECYKQRMER--GLTFLEFNYMIMQSYDFYMLYQKY 182

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
            C +Q GG DQW N++ G +L  R      +A+T  LL  + G KMGKT SGA+WL+ E 
Sbjct: 183 GCTMQFGGDDQWANMLGGTELIRRKLGKDAYAMTITLLLNSEGKKMGKTQSGAVWLDPEK 242

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVH 311
           TSP++F+QYWRN+DDADV+   + LT LP+ EID MAK +G ++N+AK+I+A E+T +VH
Sbjct: 243 TSPFDFYQYWRNVDDADVIKCMRLLTFLPLEEIDEMAKWEGSQLNKAKEILAYELTNLVH 302

Query: 312 GREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSR--GMGLLTLIVKAGFATSTNEAR 369
           G EEA+KA   A   F     + HMPT  ++ ++ S    + L++++VKAG   + +E R
Sbjct: 303 GEEEAKKAQEGARALFAGGADTAHMPTTELADEDFSEEGTIDLISMLVKAGMVPTRSEGR 362

Query: 370 RHLKSNAIKINNSIISNEKLQI 391
           R ++   + I+   I++ K  +
Sbjct: 363 RAIEQGGVSIDGEKITDVKYTV 384


>gi|332799995|ref|YP_004461494.1| Tyrosyl-tRNA synthetase [Tepidanaerobacter sp. Re1]
 gi|332697730|gb|AEE92187.1| Tyrosyl-tRNA synthetase [Tepidanaerobacter sp. Re1]
          Length = 409

 Score =  354 bits (908), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 183/407 (44%), Positives = 256/407 (62%), Gaps = 4/407 (0%)

Query: 10  SILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
            IL ERGFI Q ++  E+  L  +  V  Y+G+D TA SLH GHL  +M +  +Q+ GH 
Sbjct: 6   DILKERGFIEQATHEEEIRELLEKEKVVFYVGFDPTADSLHVGHLLPMMAMAHMQRAGHV 65

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
           PI+L+GGGT++IGDPS R + R+M+  ++I  N  + K  F   + +   K  A MLNN 
Sbjct: 66  PIALLGGGTAMIGDPSGRTDMRKMLTREQIDYNARQFKKQFEKLLDFSDNK--AYMLNNA 123

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
            WL  + YID LRE+G  FSVNRML+ E  + RL  E  L+FLEFNYM++Q+YDF+ L +
Sbjct: 124 DWLMQLNYIDFLREVGRHFSVNRMLTAECYKQRL--EAGLTFLEFNYMLMQSYDFLHLYR 181

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
            Y C+LQMGG+DQW NII G DL  R++    + +T  LLTT+ G KMGKT +GA+WL+ 
Sbjct: 182 KYGCKLQMGGNDQWSNIISGADLIRRVEGDSAYGMTFTLLTTSEGIKMGKTQAGALWLDP 241

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTM 309
           E  SPY+F+QYWRNIDD DV      LT LPM EI R++ L+G +IN+AK+++A E+T M
Sbjct: 242 EKVSPYDFYQYWRNIDDRDVEKCLSLLTFLPMDEIKRLSSLEGAQINKAKEVLAFELTKM 301

Query: 310 VHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEAR 369
           +H  EEA+KA  AA   F        +P   I   ++S GM LL L++  G  +S +E R
Sbjct: 302 IHSEEEAKKAQEAARALFKDGADMSSVPQTEIDAQKLSDGMELLELLMLTGLTSSKSEGR 361

Query: 370 RHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           R ++   I + +  I + +L+I  +DFD    + L  GKK + +  L
Sbjct: 362 RLIQQGGIYVADKRIDDVELKITAEDFDDDKTLLLRKGKKVYHMVKL 408


>gi|153810790|ref|ZP_01963458.1| hypothetical protein RUMOBE_01174 [Ruminococcus obeum ATCC 29174]
 gi|149833186|gb|EDM88268.1| hypothetical protein RUMOBE_01174 [Ruminococcus obeum ATCC 29174]
          Length = 409

 Score =  353 bits (907), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 178/400 (44%), Positives = 255/400 (63%), Gaps = 7/400 (1%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I Q+++  E+  + + G  T YIG+D TA SLH GH   L L+  LQ  G++PI
Sbjct: 7   LKARGLIAQVTDEDEIKEMVNNGKATFYIGFDPTADSLHVGHFMALCLMKRLQMAGNRPI 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GGGT +IGDPS R + R+MM  + IQ NI+  K   S FI +  GK  ALM+NN  W
Sbjct: 67  ALLGGGTGMIGDPSGRTDMRQMMTKETIQHNIDCFKKQMSRFIDFSDGK--ALMVNNADW 124

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L ++ Y+DLLR++G+ FSVNRML+ E  + R++R   LSFLEFNYMI+Q+YDF  L + Y
Sbjct: 125 LLNLNYVDLLRDVGAHFSVNRMLTAECYKQRMER--GLSFLEFNYMIMQSYDFYMLYQKY 182

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
            C +Q GG DQW N++ G +L  R      +A+T  LL  + G KMGKT SGA+WL+   
Sbjct: 183 GCNMQFGGDDQWSNMLGGTELIRRKLGKDAYAMTITLLLNSEGKKMGKTQSGAVWLDPNK 242

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVH 311
           TSP++F+QYWRN+DDADV+   + LT LP+ +ID MA  +G ++N+AK+I+A E+T +VH
Sbjct: 243 TSPFDFYQYWRNVDDADVIKCMRLLTFLPLEQIDEMATWEGSQLNKAKEILAYELTNLVH 302

Query: 312 GREEAEKAATAAMECFDMSIHSQHMPTISIS-KDEVSRG-MGLLTLIVKAGFATSTNEAR 369
           G EEA+KA   A   F     + HMPT  ++ +D V  G + L+T+++KAG   + +E R
Sbjct: 303 GEEEAKKAQEGARALFSGGADTAHMPTTELTDEDFVEEGTIDLITMLIKAGLVPTRSEGR 362

Query: 370 RHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
           R ++   + I+   I++ K  +        G + L  GKK
Sbjct: 363 RAIEQGGVSIDGEKITDIKHTVSKDTLTGDG-VVLKRGKK 401


>gi|257462926|ref|ZP_05627331.1| tyrosyl-tRNA synthetase [Fusobacterium sp. D12]
 gi|317060546|ref|ZP_07925031.1| tyrosyl-tRNA synthetase [Fusobacterium sp. D12]
 gi|313686222|gb|EFS23057.1| tyrosyl-tRNA synthetase [Fusobacterium sp. D12]
          Length = 402

 Score =  353 bits (905), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 183/399 (45%), Positives = 245/399 (61%), Gaps = 11/399 (2%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           +L ERG++ Q ++  E+  L  +  VT YIG+D TA SLH GH   +M +  +QK GH+P
Sbjct: 7   VLQERGYLKQFTHEEEIRELLEKEKVTFYIGFDPTADSLHVGHFIAMMFMAHMQKYGHRP 66

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           I+L+GGGT +IGDPS R + R MM  + +Q NI+ IK     FI +  GK  A++ NN  
Sbjct: 67  IALVGGGTGMIGDPSGRTDMRTMMTRETVQHNIDCIKKQMEKFIDFSDGK--AILANNAD 124

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           WL  + YID +R+IGS FSVNRML+ E  +SR+  E  LSFLEFNYM++Q YDF+ L K 
Sbjct: 125 WLWDLNYIDFIRDIGSHFSVNRMLAAECFKSRM--ENGLSFLEFNYMLMQGYDFLVLNKK 182

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKE 250
           YDC LQ+GG DQW N+I G++L  + +    +A+T  LLT   G KMGKT  GA+WL+ E
Sbjct: 183 YDCVLQLGGDDQWSNMIAGVELIRKKEQKSAYAMTCTLLTNKEGKKMGKTAKGALWLDPE 242

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMV 310
            TSPY F+QYWRN+DDADV      LT LPM E+ R    Q + INEAKK++A EIT M+
Sbjct: 243 KTSPYEFYQYWRNVDDADVEKCLSLLTFLPMEEVKRFVSFQDERINEAKKVLAFEITKMI 302

Query: 311 HGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARR 370
           HG EEA KA  AA   F     S      ++ K EV+ G  LL  +V      + +E RR
Sbjct: 303 HGEEEALKAQKAAEALF-----SGGTDLTTVPKLEVALGEELLNALVDNNVLKTKSEGRR 357

Query: 371 HLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
            ++  A+ + N  +S+    I  + F   G+  L  GKK
Sbjct: 358 LMQQGAMSLENIKLSDPAYLISEESFH--GDALLKLGKK 394


>gi|315185721|gb|EFU19488.1| tyrosyl-tRNA synthetase [Spirochaeta thermophila DSM 6578]
          Length = 410

 Score =  352 bits (904), Expect = 5e-95,   Method: Compositional matrix adjust.
 Identities = 181/407 (44%), Positives = 246/407 (60%), Gaps = 5/407 (1%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           SD L++L+ERG + Q ++   L     +G VT Y+G D T  SLHAGHL  L     L  
Sbjct: 2   SDALAVLAERGLVKQCTDLEGLGARMQEGPVTFYLGIDPTGPSLHAGHLVPLFAATHLVN 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+ I L+GGGT+ IGDPS + E RR++  +EI  N   I+     F      K  ALM
Sbjct: 62  AGHRAIILIGGGTARIGDPSGKTEMRRILSVEEIDRNARAIQAQIERFFPVDGNK--ALM 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           LNN  WL  + YID LREIG  FSVNRMLSFE+ ++RL  E  LSF+EFNY +LQAYDF+
Sbjct: 120 LNNAEWLADLNYIDFLREIGRHFSVNRMLSFETYKARL--ETGLSFIEFNYQLLQAYDFL 177

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L + Y C LQ+GG DQWGNI+ GIDL  R++  + + LT PL+T + G KMGKT  GA+
Sbjct: 178 VLNERYGCTLQIGGDDQWGNIVAGIDLIRRVRGEEAYGLTMPLVTRSDGKKMGKTEKGAL 237

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
           +L+  M SPY F+QYWRN+ D DV +F K  T LP+ EI  +     + IN AK+ +A E
Sbjct: 238 FLDPSMVSPYEFFQYWRNVPDQDVATFLKYYTFLPIEEIATLTAHTDERINLAKERLAYE 297

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQ-HMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           +T ++HGREEA+KA  A+   F      +  +P + I ++E+  G+G++ L VK     S
Sbjct: 298 LTALIHGREEADKALEASRAAFGKGGQDRSSIPFVEIPREELEHGIGVVELFVKTDLCAS 357

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
            +EARR +      I    + + +  ++LQD    G I L  GKK +
Sbjct: 358 KSEARRLISQGGAYIEGEQVKDLEQVVRLQDVPEAGEILLRAGKKRY 404


>gi|326791163|ref|YP_004308984.1| tyrosyl-tRNA synthetase [Clostridium lentocellum DSM 5427]
 gi|326541927|gb|ADZ83786.1| tyrosyl-tRNA synthetase [Clostridium lentocellum DSM 5427]
          Length = 407

 Score =  352 bits (903), Expect = 6e-95,   Method: Compositional matrix adjust.
 Identities = 177/403 (43%), Positives = 257/403 (63%), Gaps = 5/403 (1%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + L IL ERGFI Q+++ +E+  L  +  VT YIG+D TA SLH GH   +M +  +QK 
Sbjct: 2   NVLDILMERGFIEQMTHEKEIRELLEKEKVTFYIGFDPTADSLHVGHFVTVMAMSHMQKA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI+L GGGT+++GDP+ + + R+MM ++ I  N+   K   S FI +     +A+M+
Sbjct: 62  GHRPIALFGGGTAMVGDPTGKTDMRKMMTTEIIDHNVACFKKQMSRFISFEN--DEAIMV 119

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           +N  WL ++ YID LRE+G  FSVNRML+ E  + RL  E+ LSFLEFNYM++Q+YDF+E
Sbjct: 120 DNGDWLRNLNYIDFLREVGVHFSVNRMLTAECFKQRL--EKGLSFLEFNYMLMQSYDFLE 177

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + ++C+LQ+GG+DQW NI+ G++L  RL   + F +T  LLT + G KMGKT  GA+W
Sbjct: 178 LYRRFNCKLQLGGNDQWSNILGGVELVRRLHGDQSFGMTFSLLTNSEGKKMGKTEKGAVW 237

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           L+ E TSPY F+QYWRN+ D DV      LT +PM EI+ +  ++G  IN+AK+ +A E+
Sbjct: 238 LDPEKTSPYEFYQYWRNVADTDVKRCLSLLTFIPMDEINSLTAVEGSAINKAKERLAFEV 297

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
           T +VHG EEA KA TAA   F    H   +PT  I+  +   GM +L+L+ +     S +
Sbjct: 298 TKIVHGEEEALKADTAAKALFLGGAHGGSIPTTEINTADFETGMDILSLLQETKLVPSRS 357

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
           E RR +  N IK++   I++    I L D+     + +  GKK
Sbjct: 358 EGRRLVTQNGIKLDGVAITDPNSLITL-DYFKDNELMIQKGKK 399


>gi|197302947|ref|ZP_03167998.1| hypothetical protein RUMLAC_01675 [Ruminococcus lactaris ATCC
           29176]
 gi|197298028|gb|EDY32577.1| hypothetical protein RUMLAC_01675 [Ruminococcus lactaris ATCC
           29176]
          Length = 407

 Score =  352 bits (902), Expect = 8e-95,   Method: Compositional matrix adjust.
 Identities = 182/400 (45%), Positives = 253/400 (63%), Gaps = 7/400 (1%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I Q+++   +  L + G  T YIG+D TA SLH GH   L L+  LQ+ G+KPI
Sbjct: 7   LQARGLIAQVTDEERIRDLVNNGKATFYIGFDPTADSLHVGHFMALCLMKRLQEAGNKPI 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GGGT  IGDPS R + R MM  ++IQ N +  K   S FI +  GK  ALM+NN  W
Sbjct: 67  ALIGGGTGYIGDPSGRSDMRSMMTPEQIQHNCDCFKKQMSRFIDFSEGK--ALMVNNADW 124

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L  + YI++LREIG  FSVNRML+ E  + R+  E+ LSFLEFNYMI+QAYDF EL +NY
Sbjct: 125 LLDLNYIEVLREIGPHFSVNRMLTAECYKQRM--EKGLSFLEFNYMIMQAYDFYELFQNY 182

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
            C L+ GG DQW N++ G +L  R       A+T  LL  + G KMGKT SGA+WL+ E 
Sbjct: 183 GCNLEFGGDDQWSNMLAGTELIRRKLGKDASAMTITLLLNSEGKKMGKTQSGAVWLDPEK 242

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVH 311
           TSP++F+QYWRN+ DADV+   + LT LP+ EID+M   +G ++N AK+I+A E+T +VH
Sbjct: 243 TSPFDFYQYWRNVGDADVLKCIRMLTFLPLEEIDKMDAWEGAQLNTAKEILAYELTKLVH 302

Query: 312 GREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTNEARR 370
           G EEA+KA  +A   F    ++ +MPT  + + +   G + +L ++VK G A+S +EARR
Sbjct: 303 GEEEAKKAQESARALFSQG-NADNMPTTELEEGDFQDGKIDILAVLVKGGQASSRSEARR 361

Query: 371 HLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            +    + ++   I++        DF+  G I +  GKKN
Sbjct: 362 AVTQGGVSVDGEKITDIATAYVPADFEGEGKI-VKKGKKN 400


>gi|222475570|ref|YP_002563987.1| tyrosyl-tRNA synthetase (tyrS) [Anaplasma marginale str. Florida]
 gi|222419708|gb|ACM49731.1| tyrosyl-tRNA synthetase (tyrS) [Anaplasma marginale str. Florida]
          Length = 435

 Score =  352 bits (902), Expect = 9e-95,   Method: Compositional matrix adjust.
 Identities = 185/410 (45%), Positives = 266/410 (64%), Gaps = 5/410 (1%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           FKS FL+ L  RG++HQ ++   LD L +   +TAYIG+D TA SLH G L Q+M++ +L
Sbjct: 24  FKSGFLNTLQVRGYLHQCTDDVALDELMALQPITAYIGFDCTARSLHIGSLMQIMVMRYL 83

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           QK GHK + L+GGGT+ IGDPS +D++R M+   EI  N   I    + F+  G G    
Sbjct: 84  QKFGHKIVVLLGGGTTKIGDPSGKDKARAMLSEAEIAANKAGILATINKFLNQGDG---V 140

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           ++ +N  WL  ++Y++ LREIGS FSVN ML  +SVRSRL R+Q+LSFLEF+Y++LQ+YD
Sbjct: 141 VIADNAEWLGEVRYLEFLREIGSKFSVNAMLGLDSVRSRLDRDQNLSFLEFSYVLLQSYD 200

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           FVEL + + C LQ+GG+DQWGNI+ GIDLG +L  P+L+ LT+ LL T++G KMGKT  G
Sbjct: 201 FVELHRRHKCVLQIGGADQWGNIVNGIDLGRKLGLPQLYGLTTQLLLTSTGEKMGKTADG 260

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIA 303
           A+WL+ EM  P N+WQY+RN+ D +V    +  T LPM+EI  +  LQG+ INEAKK++A
Sbjct: 261 AVWLDAEMFDPGNYWQYFRNVPDVEVGRLLRLFTELPMNEIAELENLQGEAINEAKKVLA 320

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
           TE T + HG+  A  A  AA++ F+ +     +P   + K  +++G+ +  L+  AG   
Sbjct: 321 TEATAICHGKSAALAAENAALQVFEHN-DDAGLPHFPLHKSLIAQGISVAKLLQLAGLEE 379

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDF-DSTGNIKLSFGKKNHI 412
           S +  RR +K    KIN  ++ +    +   DF  ++G I +  GKK  I
Sbjct: 380 SISAGRRLIKGRGCKINGMVVEDADHALTHADFARNSGYITVFCGKKRRI 429


>gi|225028572|ref|ZP_03717764.1| hypothetical protein EUBHAL_02851 [Eubacterium hallii DSM 3353]
 gi|224954103|gb|EEG35312.1| hypothetical protein EUBHAL_02851 [Eubacterium hallii DSM 3353]
          Length = 410

 Score =  351 bits (901), Expect = 9e-95,   Method: Compositional matrix adjust.
 Identities = 178/404 (44%), Positives = 257/404 (63%), Gaps = 8/404 (1%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I Q+++  E+  L + G    YIG+D TA SLH GH   L L+  LQ  G+KPI
Sbjct: 7   LVARGLIAQVTDEEEIKELVNNGKAVFYIGFDPTADSLHVGHFMALCLMKRLQMAGNKPI 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GGGT++IGDPS R + R+MM  + I  N+E  K   S FI +  GK  A+++NN  W
Sbjct: 67  ALIGGGTAMIGDPSGRTDMRQMMTKETINHNVECFKKQMSRFIDFSDGK--AMLVNNADW 124

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L  + Y++LLRE+G  FSVN ML  E  + R+  E+ LSFLEFNYMI+Q+YDF EL + Y
Sbjct: 125 LLDLNYVELLREVGPCFSVNNMLRAECYKQRM--EKGLSFLEFNYMIMQSYDFYELYQKY 182

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKL--FALTSPLLTTASGTKMGKTLSGAIWLNK 249
            C +Q GG+DQW N++ G +L  R   P    +A+T  LL  + G KMGKT SGA+WL+ 
Sbjct: 183 GCNMQFGGNDQWSNMLGGTELIRRKLGPDADAYAMTITLLLNSEGKKMGKTQSGAVWLDP 242

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTM 309
             TSP++F+QYWRN+ DADV+   + LT LP+ EID M   +G ++NEAK+I+A E+T +
Sbjct: 243 NKTSPFDFYQYWRNVADADVMKCIRMLTFLPLEEIDAMDSWEGSKLNEAKEILAFELTKL 302

Query: 310 VHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTNEA 368
           VHG EEA+KA  AA   F     + +MP  +++++++  G + +L L+VK+G A + +EA
Sbjct: 303 VHGEEEAQKAQDAARALFSNGGDTANMPACAVTEEDLRDGTVDILALLVKSGLAGTRSEA 362

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           RR++    + ++   +++ K    L DF   G + L  GKK  I
Sbjct: 363 RRNVTQGGVTLDGEKVTDFKAVYTLDDFKGEGKV-LKRGKKKFI 405


>gi|255003560|ref|ZP_05278524.1| tyrosyl-tRNA synthetase (tyrS) [Anaplasma marginale str. Puerto
           Rico]
 gi|255004687|ref|ZP_05279488.1| tyrosyl-tRNA synthetase (tyrS) [Anaplasma marginale str. Virginia]
          Length = 414

 Score =  351 bits (901), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 185/410 (45%), Positives = 266/410 (64%), Gaps = 5/410 (1%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           FKS FL+ L  RG++HQ ++   LD L +   +TAYIG+D TA SLH G L Q+M++ +L
Sbjct: 3   FKSGFLNTLQVRGYLHQCTDDVALDELMALQPITAYIGFDCTARSLHIGSLMQIMVMRYL 62

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           QK GHK + L+GGGT+ IGDPS +D++R M+   EI  N   I    + F+  G G    
Sbjct: 63  QKFGHKIVVLLGGGTTKIGDPSGKDKARAMLSEAEIAANKAGILATINKFLNQGDG---V 119

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           ++ +N  WL  ++Y++ LREIGS FSVN ML  +SVRSRL R+Q+LSFLEF+Y++LQ+YD
Sbjct: 120 VIADNAEWLGEVRYLEFLREIGSKFSVNAMLGLDSVRSRLDRDQNLSFLEFSYVLLQSYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           FVEL + + C LQ+GG+DQWGNI+ GIDLG +L  P+L+ LT+ LL T++G KMGKT  G
Sbjct: 180 FVELHRRHKCVLQIGGADQWGNIVNGIDLGRKLGLPQLYGLTTQLLLTSTGEKMGKTADG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIA 303
           A+WL+ EM  P N+WQY+RN+ D +V    +  T LPM+EI  +  LQG+ INEAKK++A
Sbjct: 240 AVWLDAEMFDPGNYWQYFRNVPDVEVGRLLRLFTELPMNEIAELENLQGEAINEAKKVLA 299

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
           TE T + HG+  A  A  AA++ F+ +     +P   + K  +++G+ +  L+  AG   
Sbjct: 300 TEATAICHGKSAALAAENAALQVFEHN-DDAGLPHFPLHKSLIAQGISVAKLLQLAGLEE 358

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDF-DSTGNIKLSFGKKNHI 412
           S +  RR +K    KIN  ++ +    +   DF  ++G I +  GKK  I
Sbjct: 359 SISAGRRLIKGRGCKINGMVVEDADHALTHADFARNSGYITVFCGKKRRI 408


>gi|291549525|emb|CBL25787.1| tyrosyl-tRNA synthetase [Ruminococcus torques L2-14]
          Length = 407

 Score =  351 bits (901), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 180/400 (45%), Positives = 253/400 (63%), Gaps = 7/400 (1%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I Q+++   +  L + G  T YIG+D TA SLH GH   L L+  LQ+ G+KPI
Sbjct: 7   LQARGLIAQVTDEERIKELVNNGKATFYIGFDPTADSLHVGHFMALCLMKRLQEAGNKPI 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GGGT  IGDPS R + R MM  ++IQ N +  K   S FI +  GK  ALM+NN  W
Sbjct: 67  ALIGGGTGYIGDPSGRTDMRSMMTPEQIQHNCDCFKEQMSRFIDFSDGK--ALMVNNADW 124

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L  + YID+LRE+G  FSVNRML+ E  + R+  E+ LSFLEFNYMI+QAYDF EL +NY
Sbjct: 125 LLDLNYIDVLREVGPHFSVNRMLTAECYKQRM--EKGLSFLEFNYMIMQAYDFYELFQNY 182

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
            C L+ GG DQW N++ G +L  R       A+T  LL  + G KMGKT SGA+WL+   
Sbjct: 183 GCNLEFGGDDQWSNMLAGTELIRRKLGKDASAMTITLLLNSEGKKMGKTQSGAVWLDPNK 242

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVH 311
           TSP++F+QYWRN+ DADV+   + LT LP+ EID+M   +G ++N AK+I+A E+T +VH
Sbjct: 243 TSPFDFYQYWRNVGDADVLKCIRMLTFLPLEEIDKMDTWEGAQLNTAKEILAYELTKLVH 302

Query: 312 GREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTNEARR 370
           G EEA+KA  +A   F    ++ +MPT  + + +   G + +L ++VK+G A+S ++ARR
Sbjct: 303 GEEEAKKAQESARALFSQG-NADNMPTTELEEADFQDGKIDILAVLVKSGQASSRSDARR 361

Query: 371 HLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            +    + ++   +++        DFD  G I +  GKKN
Sbjct: 362 AVTQGGVSVDGEKVTDITTTYAPADFDGEGKI-VKKGKKN 400


>gi|56417206|ref|YP_154280.1| tyrosyl-tRNA synthetase [Anaplasma marginale str. St. Maries]
 gi|81358833|sp|Q5P9K5|SYY_ANAMM RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|56388438|gb|AAV87025.1| tyrosyl-tRNA synthetase [Anaplasma marginale str. St. Maries]
          Length = 414

 Score =  351 bits (901), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 185/410 (45%), Positives = 266/410 (64%), Gaps = 5/410 (1%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           FKS FL+ L  RG++HQ ++   LD L +   +TAYIG+D TA SLH G L Q+M++ +L
Sbjct: 3   FKSGFLNTLQVRGYLHQCTDDVALDELMALQPITAYIGFDCTARSLHIGSLMQIMVMRYL 62

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           QK GHK + L+GGGT+ IGDPS +D++R M+   EI  N   I    + F+  G G    
Sbjct: 63  QKFGHKIVVLLGGGTTKIGDPSGKDKARAMLSEAEIAANKAGILATINKFLNQGDG---V 119

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           ++ +N  WL  ++Y++ LREIGS FSVN ML  +SVRSRL R+Q+LSFLEF+Y++LQ+YD
Sbjct: 120 VIADNAEWLGEVRYLEFLREIGSKFSVNAMLGLDSVRSRLDRDQNLSFLEFSYVLLQSYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           FVEL + + C LQ+GG+DQWGNI+ GIDLG +L  P+L+ LT+ LL T++G KMGKT  G
Sbjct: 180 FVELHRRHKCVLQIGGADQWGNIVNGIDLGRKLGLPQLYGLTTHLLLTSTGEKMGKTADG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIA 303
           A+WL+ EM  P N+WQY+RN+ D +V    +  T LPM+EI  +  LQG+ INEAKK++A
Sbjct: 240 AVWLDAEMFDPGNYWQYFRNVADVEVGRLLRLFTELPMNEIAELENLQGEAINEAKKVLA 299

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
           TE T + HG+  A  A  AA++ F+ +     +P   + K  +++G+ +  L+  AG   
Sbjct: 300 TEATAICHGKSAALAAENAALQVFEHN-DDAGLPHFPLHKSLIAQGISVAKLLQLAGLEE 358

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDF-DSTGNIKLSFGKKNHI 412
           S +  RR +K    KIN  ++ +    +   DF  ++G I +  GKK  I
Sbjct: 359 SISAGRRLIKGRGCKINGMVVEDADHALTHADFARNSGYITVFCGKKRRI 408


>gi|291526914|emb|CBK92500.1| tyrosyl-tRNA synthetase [Eubacterium rectale M104/1]
          Length = 408

 Score =  351 bits (901), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 174/399 (43%), Positives = 257/399 (64%), Gaps = 6/399 (1%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I Q+++ +E+  L + G  T YIG+D TA SLH GH   L L+  LQ  G+KPI
Sbjct: 7   LVARGLIAQVTDEKEIKELINNGKATFYIGFDPTADSLHVGHFMALCLMKRLQMAGNKPI 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+GGGT+ IGDPS R + R+MM ++ I  N+E  K   S FI +G GK  A+M+NN  W
Sbjct: 67  VLIGGGTAQIGDPSGRTDMRQMMTTETINHNVECFKKQMSRFIDFGEGK--AIMVNNADW 124

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L  + Y+D+LRE+G+ FSVNRML+ E  + R+  E+ LSFLEFNYMI+Q+YDF  L + Y
Sbjct: 125 LMDLNYVDVLREVGAHFSVNRMLTAECYKQRM--EKGLSFLEFNYMIMQSYDFYTLFQKY 182

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
            C ++ GG DQW N++ G +L  R      +A+T  LL  + G KMGKT SGA+WL+   
Sbjct: 183 GCNMEFGGDDQWSNMLGGTELIRRKLGKDAYAMTINLLLNSEGKKMGKTQSGAVWLDPNK 242

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVH 311
           T+P+ F+QYWRN+ DADV+   + LT LP+ EID+M   +G ++NEAK+I+A E+T +VH
Sbjct: 243 TTPFEFFQYWRNVSDADVLKCIRMLTFLPLEEIDKMESWEGAQLNEAKEILAFELTKLVH 302

Query: 312 GREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTNEARR 370
           G EEA KA  A+   F    ++ +MPT++++ ++   G + +++++VKAG   S  + RR
Sbjct: 303 GEEEATKAKEASHALFAGGANNANMPTVTVTAEDFPDGELDIISVLVKAGLCDSRGDGRR 362

Query: 371 HLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
           +++   + + +  I++   +  L DF   G I +  GKK
Sbjct: 363 NIQQGGVSVADEKITDISTKYTLDDFKGEGLI-IRRGKK 400


>gi|317132187|ref|YP_004091501.1| tyrosyl-tRNA synthetase [Ethanoligenens harbinense YUAN-3]
 gi|315470166|gb|ADU26770.1| tyrosyl-tRNA synthetase [Ethanoligenens harbinense YUAN-3]
          Length = 408

 Score =  351 bits (901), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 163/388 (42%), Positives = 253/388 (65%), Gaps = 5/388 (1%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L+ RG I Q ++  ++  L + G VT YIG+D TA SLH GH  Q++++  +Q+ GH+P+
Sbjct: 7   LTARGLIAQTTDEEKVRELVNGGPVTFYIGFDPTADSLHVGHFLQMVIMAHMQRAGHRPV 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +++GGGT ++GDP+ R + R+M+  + I+ NI + K     FI +  GK  ALM+NN  W
Sbjct: 67  AVLGGGTGMVGDPTGRTDMRQMLTPEAIRHNIAQFKKQMERFIDFSDGK--ALMVNNADW 124

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L S+ Y+D LRE+G  FS+NRML+FE  ++R++R   LSFLEFNYM++Q+YDF  L  +Y
Sbjct: 125 LLSLNYVDFLREVGVHFSINRMLTFECFKTRMER--GLSFLEFNYMLMQSYDFYRLFTDY 182

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
            C+++ GG DQW NII G++L  +      + +T  LLTT+ G KMGKT  GA+WL+ E 
Sbjct: 183 GCKIEFGGDDQWANIIGGVELIRKKTGNDAYGMTFQLLTTSDGKKMGKTQGGAVWLDPEK 242

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVH 311
           TSPY+F+QYWRN++D++V+   K +T +P+ EI+  + L+G E+N AK+ +A E+T  VH
Sbjct: 243 TSPYDFYQYWRNVEDSNVIRLLKMITFVPLDEIETFSDLEGSELNRAKERLAYEVTKQVH 302

Query: 312 GREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTNEARR 370
           G+EEA+KA  A    F     + +MP  ++S+ +   G + +L L+V+ G A S  EARR
Sbjct: 303 GKEEADKAQEATHALFGTGGSNANMPATALSESDFHDGQITILELLVRCGLAPSRGEARR 362

Query: 371 HLKSNAIKINNSIISNEKLQIKLQDFDS 398
            ++   + +N+  I++        DF +
Sbjct: 363 LIEQGGVSVNDRKITSFSQTFAPADFQT 390


>gi|295109895|emb|CBL23848.1| tyrosyl-tRNA synthetase [Ruminococcus obeum A2-162]
          Length = 409

 Score =  351 bits (900), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 169/379 (44%), Positives = 247/379 (65%), Gaps = 6/379 (1%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I Q+++  E+  + + G  T YIG+D TA SLH GH   L L+  LQ  G++PI
Sbjct: 7   LKARGLIAQVTDEDEIKEMVNNGKATFYIGFDPTADSLHVGHFMALCLMKRLQMAGNRPI 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GGGT +IGDPS R + R+MM  + IQ NI+  K   S FI +  GK  ALM+NN  W
Sbjct: 67  ALLGGGTGMIGDPSGRTDMRQMMTKETIQHNIDCFKKQMSRFIDFSDGK--ALMVNNADW 124

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L ++ Y+DLLR++G+ FSVNRML+ E  + R++R   LSFLEFNYMI+Q+YDF  L + Y
Sbjct: 125 LLNLNYVDLLRDVGAHFSVNRMLTAECYKQRMER--GLSFLEFNYMIMQSYDFYMLYQKY 182

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
            C +Q GG DQW N++ G +L  R      +A+T  LL  + G KMGKT SGA+WL+   
Sbjct: 183 GCNMQFGGDDQWSNMLGGTELIRRKLGKDAYAMTITLLLNSEGKKMGKTQSGAVWLDPNK 242

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVH 311
           TSP++F+QYWRN+DDADV+   + LT LP+ +ID MA  +G ++N+AK+I+A E+T +VH
Sbjct: 243 TSPFDFYQYWRNVDDADVIKCMRLLTFLPLEQIDEMATWEGSQLNKAKEILAYELTNLVH 302

Query: 312 GREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG--MGLLTLIVKAGFATSTNEAR 369
           G EEA+KA   A   F     + HMP+  ++ ++ +    + L+T+++KAG   + +E R
Sbjct: 303 GEEEAKKAQEGARALFSGGADTAHMPSTELADEDFTEDDTIDLITMLIKAGLVPTRSEGR 362

Query: 370 RHLKSNAIKINNSIISNEK 388
           R ++   + I+   I++ K
Sbjct: 363 RAIEQGGVSIDGEKITDIK 381


>gi|291526421|emb|CBK92008.1| tyrosyl-tRNA synthetase [Eubacterium rectale DSM 17629]
          Length = 408

 Score =  350 bits (899), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 173/399 (43%), Positives = 257/399 (64%), Gaps = 6/399 (1%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I Q+++ +E+  L + G  T YIG+D TA SLH GH   L L+  LQ  G+KPI
Sbjct: 7   LVARGLIAQVTDEKEIKELINNGKATFYIGFDPTADSLHVGHFMALCLMKRLQMAGNKPI 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+GGGT+ IGDPS R + R+MM ++ I  N+E  K   S FI +G GK  A+M+NN  W
Sbjct: 67  VLIGGGTAQIGDPSGRTDMRQMMTTETINHNVECFKKQMSRFIDFGEGK--AIMVNNADW 124

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L  + Y+D+LRE+G+ FSVNRML+ E  + R+  E+ LSFLEFNYMI+Q+YDF  L + Y
Sbjct: 125 LMDLNYVDVLREVGAHFSVNRMLTAECYKQRM--EKGLSFLEFNYMIMQSYDFYTLFQKY 182

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
            C ++ GG DQW N++ G +L  R      +A+T  LL  + G KMGKT SGA+WL+   
Sbjct: 183 GCNMEFGGDDQWSNMLGGTELIRRKLGKDAYAMTINLLLNSEGKKMGKTQSGAVWLDPNK 242

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVH 311
           T+P+ F+QYWRN+ DADV+   + LT LP+ EID+M   +G ++NEAK+I+A E+T +VH
Sbjct: 243 TTPFEFFQYWRNVSDADVLKCIRMLTFLPLEEIDKMESWEGAQLNEAKEILAFELTKLVH 302

Query: 312 GREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTNEARR 370
           G EEA KA  A+   F    ++ +MPT++++ ++   G + +++++VKAG   S  + RR
Sbjct: 303 GEEEATKAKEASHALFAGGANNANMPTVTVTAEDFPDGELDIISVLVKAGLCDSRGDGRR 362

Query: 371 HLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
           +++   + + +  +++   +  L DF   G I +  GKK
Sbjct: 363 NIQQGGVSVADEKVTDISTKYTLDDFKGEGLI-IRRGKK 400


>gi|325663618|ref|ZP_08152025.1| tyrosyl-tRNA synthetase [Lachnospiraceae bacterium 4_1_37FAA]
 gi|331087136|ref|ZP_08336207.1| tyrosyl-tRNA synthetase [Lachnospiraceae bacterium 9_1_43BFAA]
 gi|325470304|gb|EGC73536.1| tyrosyl-tRNA synthetase [Lachnospiraceae bacterium 4_1_37FAA]
 gi|330409105|gb|EGG88562.1| tyrosyl-tRNA synthetase [Lachnospiraceae bacterium 9_1_43BFAA]
          Length = 407

 Score =  350 bits (899), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 183/400 (45%), Positives = 252/400 (63%), Gaps = 7/400 (1%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I Q+++   +  L ++G  T YIG+D TA SLH GH   L L+  LQ  G+KPI
Sbjct: 7   LKARGLIAQVTDEELISNLINEGKATFYIGFDPTADSLHVGHFMALCLMKRLQMAGNKPI 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GGGT  IGDPS R + R MM  ++IQ N +  K   S FI +  GK  A+M+NN  W
Sbjct: 67  ALIGGGTGYIGDPSGRTDMRSMMTPEQIQHNCDCFKEQMSKFIDFSEGK--AMMVNNADW 124

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L  + YI+LLRE+G+ FSVNRML+ E  + R+  E+ LSFLEFNYMI+QAYDF  L + Y
Sbjct: 125 LLDLNYIELLREVGAHFSVNRMLTAECYKQRM--EKGLSFLEFNYMIMQAYDFYALYQKY 182

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
            C LQ GG DQW N++ G +L  R       A+T  LL  + G KMGKT SGA+WL+   
Sbjct: 183 GCNLQFGGDDQWSNMLAGTELIRRKLGKDASAMTITLLLNSEGKKMGKTQSGAVWLDPNK 242

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVH 311
           TSP+ F+QYWRNI DADV+   + LT LP+ EID M K +G ++N+AK+I+A E+T +VH
Sbjct: 243 TSPFEFYQYWRNIADADVLKCIRMLTFLPLEEIDAMDKWEGSQLNQAKEILAYELTKLVH 302

Query: 312 GREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGM-GLLTLIVKAGFATSTNEARR 370
           G EEA KA  ++   F  S ++ +MPT  + + + + GM  +LTL+VK+G   S +EARR
Sbjct: 303 GEEEAVKAQESSRALFS-SGNAANMPTAELEESDFTEGMIDILTLLVKSGLVPSKSEARR 361

Query: 371 HLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            ++   + +N   + + K     + FD   +  L  GKKN
Sbjct: 362 AVQQGGVSVNGEKVEDIKTAYAPETFDGE-DFVLKRGKKN 400


>gi|238922616|ref|YP_002936129.1| tyrosyl-tRNA synthetase [Eubacterium rectale ATCC 33656]
 gi|238874288|gb|ACR73995.1| tyrosyl-tRNA synthetase [Eubacterium rectale ATCC 33656]
          Length = 428

 Score =  350 bits (899), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 173/399 (43%), Positives = 257/399 (64%), Gaps = 6/399 (1%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I Q+++ +E+  L + G  T YIG+D TA SLH GH   L L+  LQ  G+KPI
Sbjct: 27  LVARGLIAQVTDEKEIKELINNGKATFYIGFDPTADSLHVGHFMALCLMKRLQMAGNKPI 86

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+GGGT+ IGDPS R + R+MM ++ I  N+E  K   S FI +G GK  A+M+NN  W
Sbjct: 87  VLIGGGTAQIGDPSGRTDMRQMMTTETINHNVECFKKQMSRFIDFGEGK--AIMVNNADW 144

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L  + Y+D+LRE+G+ FSVNRML+ E  + R+  E+ LSFLEFNYMI+Q+YDF  L + Y
Sbjct: 145 LMDLNYVDVLREVGAHFSVNRMLTAECYKQRM--EKGLSFLEFNYMIMQSYDFYTLFQKY 202

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
            C ++ GG DQW N++ G +L  R      +A+T  LL  + G KMGKT SGA+WL+   
Sbjct: 203 GCNMEFGGDDQWSNMLGGTELIRRKLGKDAYAMTINLLLNSEGKKMGKTQSGAVWLDPNK 262

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVH 311
           T+P+ F+QYWRN+ DADV+   + LT LP+ EID+M   +G ++NEAK+I+A E+T +VH
Sbjct: 263 TTPFEFFQYWRNVSDADVLKCIRMLTFLPLEEIDKMESWEGAQLNEAKEILAFELTKLVH 322

Query: 312 GREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTNEARR 370
           G EEA KA  A+   F    ++ +MPT++++ ++   G + +++++VKAG   S  + RR
Sbjct: 323 GEEEATKAKEASHALFAGGANNANMPTVTVTAEDFPDGELDIISVLVKAGLCDSRGDGRR 382

Query: 371 HLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
           +++   + + +  +++   +  L DF   G I +  GKK
Sbjct: 383 NIQQGGVSVADEKVTDISTKYTLDDFKGEGLI-IRRGKK 420


>gi|289423529|ref|ZP_06425330.1| tyrosine--tRNA ligase [Peptostreptococcus anaerobius 653-L]
 gi|289156031|gb|EFD04695.1| tyrosine--tRNA ligase [Peptostreptococcus anaerobius 653-L]
          Length = 407

 Score =  350 bits (898), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 171/386 (44%), Positives = 246/386 (63%), Gaps = 5/386 (1%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG + Q+++  E+  L + G    Y+G+D TA SLH GH   L L+  LQ  G+ P+
Sbjct: 7   LLARGLVAQVTDEEEIRELVNTGKAKFYLGFDPTADSLHVGHFMALCLMRRLQMAGNTPV 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+GGGT  IGDPS R + R+MM  + IQ N +  K   S FI++G GK   +M+NN  W
Sbjct: 67  VLVGGGTGYIGDPSGRTDMRQMMTPETIQHNCDCFKVQMSKFIEFGEGK--GIMVNNADW 124

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L  + YID+LRE+G  FSVN ML  E  ++R+  E+ LSFLEFNYM++Q+YDF  L K  
Sbjct: 125 LLQLNYIDMLREVGPHFSVNNMLRAECYKNRM--EKGLSFLEFNYMVMQSYDFYHLYKEL 182

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
            C +Q+GG DQW N++ G DL  R      FA+T PLLT A GTKMGKT  GA+WL+   
Sbjct: 183 GCNMQLGGDDQWSNLLGGTDLIRRKTGANAFAMTIPLLTKADGTKMGKTAGGAVWLDPNK 242

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVH 311
           TSP++F+QYWRN+DDADVV+F K+LT L + EI  M   +G ++NEAK+++A E+T++VH
Sbjct: 243 TSPFDFYQYWRNVDDADVVNFIKKLTFLSLEEIKPMESWEGAKLNEAKELLAYEMTSLVH 302

Query: 312 GREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTNEARR 370
            +EEA+KA  A+   F   + S +MPT  +   ++  G + L  L+++ G A + +E RR
Sbjct: 303 SKEEADKAQEASRALFRGGVDSANMPTTELDSSKLVDGSIALDELMIEIGLAPTKSEVRR 362

Query: 371 HLKSNAIKINNSIISNEKLQIKLQDF 396
            ++   + +N+S+  + K+ I   D 
Sbjct: 363 LVQQGGVSVNDSVADDCKMAITEADL 388


>gi|269958403|ref|YP_003328190.1| tyrosyl-tRNA synthetase [Anaplasma centrale str. Israel]
 gi|269848232|gb|ACZ48876.1| tyrosyl-tRNA synthetase [Anaplasma centrale str. Israel]
          Length = 414

 Score =  350 bits (897), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 183/410 (44%), Positives = 262/410 (63%), Gaps = 5/410 (1%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           +KS+FL +L  RG++HQ +    LD L +   +TAYIG+D TA SLH G L Q+M++ +L
Sbjct: 3   YKSEFLRVLQTRGYLHQCTEAAALDELMALRPITAYIGFDCTARSLHIGSLMQIMVMRYL 62

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           QK GHK + L+GGGT+ IGDPS +D++R M+   EI  N   I      F+    G    
Sbjct: 63  QKFGHKVVVLLGGGTTKIGDPSGKDKARAMLSEAEIAANKAGILATIEKFLHRDNG---V 119

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           ++++N  WL  ++Y++ LREIGS FSVN ML  +SVRSRL R+QSLSFLEF+Y++LQ+YD
Sbjct: 120 IVVDNAEWLGEVRYLEFLREIGSKFSVNAMLGLDSVRSRLDRDQSLSFLEFSYVLLQSYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           FVEL + + C LQ+GG+DQWGNI+ GIDLG +L  P+L+ LT+ LL T++G KMGKT  G
Sbjct: 180 FVELHRRHKCVLQIGGADQWGNIVNGIDLGRKLGLPQLYGLTTHLLLTSTGEKMGKTAYG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIA 303
           A+WL+  M  P N+WQY+RN+ D +V    +  T LPM+EI  +  LQG+ INEAKK++A
Sbjct: 240 AVWLDAAMFDPGNYWQYFRNVPDVEVGRLLRLFTELPMNEIAELENLQGEAINEAKKVLA 299

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
           TE T + HG+  A  A  AA++ F+ +     +P   + K  +++G+ +  L+  AG   
Sbjct: 300 TEATAICHGKSAALAAENAALQVFEHN-DDVGLPNFPLHKSLIAQGISVAKLLQLAGLEE 358

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN-IKLSFGKKNHI 412
           S +  RR +K    KIN  ++ +    +   DF   G  I +  GKK  I
Sbjct: 359 SISAGRRLIKGRGCKINGMVVEDADHALTQADFARNGGYITVFCGKKRRI 408


>gi|323447669|gb|EGB03582.1| hypothetical protein AURANDRAFT_59618 [Aureococcus anophagefferens]
          Length = 385

 Score =  350 bits (897), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 174/393 (44%), Positives = 244/393 (62%), Gaps = 15/393 (3%)

Query: 32  SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESR 91
           S G V AY+G+D TA SLH G L Q+M+L  LQK GH P+ L+GGGT+ +GDPS +DESR
Sbjct: 2   SGGPVAAYLGFDATADSLHVGSLLQIMILRLLQKHGHTPVVLVGGGTTKVGDPSGKDESR 61

Query: 92  RMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVN 151
           +++    I  NI  I  IF  F+ +G G   A+++NN  WL  + Y+  LRE GS FSVN
Sbjct: 62  KLLDDDAIAGNIAGISAIFDKFLDFGPGG--AVLVNNADWLDELAYVKFLREFGSHFSVN 119

Query: 152 RMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGID 211
           RMLSFESV+ RL REQ LSFLEFNYMILQAYDFVELA+ YD +LQ+GGSDQWGNI+ G++
Sbjct: 120 RMLSFESVKQRLGREQPLSFLEFNYMILQAYDFVELARRYDVKLQLGGSDQWGNIVSGVE 179

Query: 212 LGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVS 271
           L  R+    L  LT+PL+ T+ G KMGKT  GA+WL+    +PY++WQ+WRN  D DVV 
Sbjct: 180 LARRVDRKSLVGLTAPLIATSDGRKMGKTAEGAVWLSPGKLAPYDYWQFWRNTVDDDVVR 239

Query: 272 FAKRLTTLPMSEIDRMAK-----LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMEC 326
           F +  T  P+ E+D + +          +N AK+ +A   TT++HG +            
Sbjct: 240 FTRMFTDAPLEEVDALERELAAAPDAAAVNAAKRRLADACTTLLHGADALPDIHATVDRL 299

Query: 327 FDMSIHS-QHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIIS 385
           F     S   +P +++   E++    ++  +V AGFA S +EA+R +K    +++ + + 
Sbjct: 300 FAGGGGSAASLPRVAVGDAEIT----VVDALVSAGFAKSKSEAKRLIKGGGARLDGAKVD 355

Query: 386 NEKLQIKLQDFDSTGNIKLSFGKKNHIICHLCG 418
           +    + L+   +  ++KLS GKK H I  L G
Sbjct: 356 DVDATVALE---AGVDVKLSSGKKKHAILELAG 385


>gi|150019425|ref|YP_001311679.1| tyrosyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052]
 gi|254783582|sp|A6M293|SYY_CLOB8 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|149905890|gb|ABR36723.1| tyrosyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052]
          Length = 406

 Score =  350 bits (897), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 177/406 (43%), Positives = 258/406 (63%), Gaps = 7/406 (1%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           ++ L  L ERG+I Q ++  E   L     +T YIG+D TA SLH GH   +M +  +Q+
Sbjct: 2   ANVLDELLERGYIKQFTHEEETRKLLENEKITFYIGFDPTADSLHVGHFIAMMFMAHMQR 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+PI+L+GGGT+++GDPS + + R+M+  ++IQ N++ IK     FI +  GK  A++
Sbjct: 62  AGHRPIALIGGGTAMVGDPSGKTDMRKMLTKEDIQHNVDSIKKQMERFIDFSDGK--AIL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
            NN  WL ++ Y+D LRE+G  FSVNRML+ E  + RL  E+ LSFLEFNYM++Q YDF 
Sbjct: 120 ANNADWLLNLNYVDFLREVGVHFSVNRMLTAECFKQRL--EKGLSFLEFNYMLMQGYDFY 177

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           EL + Y+C++Q+GG DQW N+I G++L  R    +  A+T  LLT + G KMGKT+ GA+
Sbjct: 178 ELNQKYNCKMQLGGDDQWSNMIAGVELVRRKAQGEAMAMTCTLLTNSQGQKMGKTVGGAL 237

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
           WL+   TSPY+F+QYWRN+DDADV      LT LPM E+ R+  L+G EIN AKK++A E
Sbjct: 238 WLDPAKTSPYDFYQYWRNVDDADVEKCLALLTFLPMDEVRRLGALEGAEINGAKKVLAYE 297

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           IT +VHG EEA+KA  AA   F       ++PT++I+K+E+  G+ +L ++       S 
Sbjct: 298 ITKLVHGEEEAKKAEEAATALFAGGADMSNVPTVTIAKEEI--GLPILDVMASTKIIPSK 355

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
            E RR ++   + IN   +      +  +DF   G + +  GKKN+
Sbjct: 356 KEGRRLIEQGGLSINGVKVEGVNRILTEEDFQD-GAVLIKRGKKNY 400


>gi|302341738|ref|YP_003806267.1| tyrosyl-tRNA synthetase [Desulfarculus baarsii DSM 2075]
 gi|301638351|gb|ADK83673.1| tyrosyl-tRNA synthetase [Desulfarculus baarsii DSM 2075]
          Length = 410

 Score =  350 bits (897), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 181/399 (45%), Positives = 252/399 (63%), Gaps = 2/399 (0%)

Query: 13  SERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPIS 72
           + RGFI Q S+ + L  L     VT YIG+D TA+SLH G L  ++ L  LQ+ GH+P+ 
Sbjct: 8   ASRGFIEQCSDAQALRQLFQTERVTGYIGFDPTATSLHVGSLVPIISLMHLQRAGHRPLV 67

Query: 73  LMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL 132
           L+GGGT ++GDPS + E R+++  ++I +N+  ++   S F+ +G G+  A M+NN  WL
Sbjct: 68  LVGGGTGMVGDPSGKTEMRKLLTIEQISQNVAALQNQLSRFLDFGPGQ--AQMINNADWL 125

Query: 133 CSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYD 192
             + YI+ LR+ G  FSVNRML  ESV+ RL +E  LSF+EFNYMILQAYDF+ L+   D
Sbjct: 126 LKLNYIEFLRDTGRHFSVNRMLQQESVKLRLAQETGLSFIEFNYMILQAYDFMYLSHAMD 185

Query: 193 CRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMT 252
           C+LQMGG+DQWGNI+ GIDL  R+    +  LT PLLTTASG KMGKT +GAIWL+ E T
Sbjct: 186 CKLQMGGNDQWGNIVMGIDLARRVHGNTVHGLTFPLLTTASGQKMGKTHAGAIWLDPERT 245

Query: 253 SPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHG 312
           SPY F+QYW N  D DV  F K  T LP+ +I  +A LQG  IN+AK+ +A E+TT+VHG
Sbjct: 246 SPYEFYQYWVNTHDQDVERFLKLFTFLPLDQIAELAALQGAAINQAKQTLAREVTTIVHG 305

Query: 313 REEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHL 372
           ++ A +A  AA   F     +  +P  +I +  +  G+   +L+V+ G A ++++ARR +
Sbjct: 306 QQAAAEAQAAAQAAFAGQGDADGVPATNIDRATLQAGLPAFSLLVQTGLAKTSSDARRLI 365

Query: 373 KSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
                 +  + I      I L   +  G I L  GKK H
Sbjct: 366 SQGGAYVGQNRIDAFDQIISLAHANPDGAIWLRAGKKKH 404


>gi|254517941|ref|ZP_05129997.1| tyrosyl-tRNA synthetase [Clostridium sp. 7_2_43FAA]
 gi|226911690|gb|EEH96891.1| tyrosyl-tRNA synthetase [Clostridium sp. 7_2_43FAA]
          Length = 406

 Score =  349 bits (896), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 171/406 (42%), Positives = 257/406 (63%), Gaps = 7/406 (1%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           ++ L  L +RG+I Q ++  E   L  +  +T YIG+D TA SLH GH   LM +  +QK
Sbjct: 2   ANVLDELLDRGYIKQFTHEDETRELLEKEKITFYIGFDPTADSLHVGHFIALMFMAHMQK 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+PI+L+GGGT+++GDPS + + R M+  ++IQ N++ IK     FI +   K  A++
Sbjct: 62  AGHRPIALLGGGTAMVGDPSGKTDMRTMLTKEQIQHNVDSIKKQMERFIDFSDDK--AIL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  WL ++ Y+D LRE+G  FSVNRML+ E  + RL  E+ LSFLEFNYM++Q YDF 
Sbjct: 120 VNNADWLLNLNYVDFLREVGVHFSVNRMLTAECFKQRL--EKGLSFLEFNYMLMQGYDFY 177

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L + Y C++Q+GG DQW N+I G++L  R    +  A+T  LLT + G KMGKT+ GA+
Sbjct: 178 VLNQKYGCKMQLGGDDQWSNMIAGVELVRRKAQGQAMAMTCSLLTNSQGQKMGKTVGGAL 237

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
           WL+ E TSP++F+QYWRN+DDADV      LT +PM E+  +  ++G  INEAKK +A E
Sbjct: 238 WLDPEKTSPFDFYQYWRNVDDADVEKCLSLLTFVPMDEVREICSVEGAAINEAKKRLAFE 297

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           +T +VHG EEA KA +AA   F   +   ++PT++ISK+++  G  +L ++ +     S 
Sbjct: 298 VTKLVHGEEEATKAKSAAEALFSGGVDMSNVPTVTISKEKL--GSTILDIMAENKIVPSK 355

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
            E RR ++   + +N   ++     ++  D +  G+  L  GKKN+
Sbjct: 356 AEGRRLIQQGGLSLNGEKVTEVTRTLEESDLED-GSALLKRGKKNY 400


>gi|307719118|ref|YP_003874650.1| tyrosyl-tRNA synthetase [Spirochaeta thermophila DSM 6192]
 gi|306532843|gb|ADN02377.1| tyrosyl-tRNA synthetase [Spirochaeta thermophila DSM 6192]
          Length = 410

 Score =  349 bits (896), Expect = 5e-94,   Method: Compositional matrix adjust.
 Identities = 181/407 (44%), Positives = 246/407 (60%), Gaps = 5/407 (1%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           SD L +L+ERG + Q ++   L     +G VT Y+G D T  SLHAGHL  L     L  
Sbjct: 2   SDALPLLAERGLVKQCTDLEGLGARMQEGPVTFYLGIDPTGPSLHAGHLVPLFAATHLVN 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+ I L+GGGT+ IGDPS + E RR++  +EI  N   I+     F     GK  ALM
Sbjct: 62  AGHRAIILIGGGTARIGDPSGKTEMRRILSVEEIDRNARAIQAQIERFFPV-DGKR-ALM 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           LNN  WL  + YID LREIG  FSVNRMLSFE+ ++RL  E  LSF+EFNY +LQAYDF+
Sbjct: 120 LNNAEWLAELNYIDFLREIGRHFSVNRMLSFETYKARL--ETGLSFIEFNYQLLQAYDFL 177

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L + Y C LQ+GG DQWGNI+ GIDL  R++  + + LT PL+T + G KMGKT  GA+
Sbjct: 178 VLNERYGCTLQIGGDDQWGNIVAGIDLIRRVRGEEAYGLTMPLVTRSDGKKMGKTEKGAL 237

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
           +L+  M SPY F+QYWRN+ D DV +F K  T LP+ EI  +     + IN AK+ +A E
Sbjct: 238 FLDPSMVSPYEFFQYWRNVPDQDVATFLKYYTFLPIDEIASLTAHTDERINLAKERLAYE 297

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQ-HMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           +T ++HGREEA+KA  A+   F      +  +P + I ++E+  G+G++ L VK     S
Sbjct: 298 LTALIHGREEADKALEASRAAFGKGGQDRSSIPFVEIPREELEHGIGVVELFVKTDLCAS 357

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
            +EARR +      I    + + +  ++LQD    G + L  GKK +
Sbjct: 358 KSEARRLISQGGAYIEGEQVKDLEQVVRLQDVPEAGELLLRAGKKRY 404


>gi|257466034|ref|ZP_05630345.1| tyrosyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563]
 gi|315917191|ref|ZP_07913431.1| tyrosyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563]
 gi|313691066|gb|EFS27901.1| tyrosyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563]
          Length = 402

 Score =  349 bits (895), Expect = 5e-94,   Method: Compositional matrix adjust.
 Identities = 180/404 (44%), Positives = 248/404 (61%), Gaps = 11/404 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
            +   +L ERG++ Q ++  E+  L  +  VT YIG+D TA SLH GH   +M +  +QK
Sbjct: 2   ENVFHVLQERGYLKQFTHEEEIKALLEKEKVTFYIGFDPTADSLHVGHFIAMMFMAHMQK 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+PI+L+GGGT +IGDPS R + R MM  + +Q NI+ IK     FI +  GK  A++
Sbjct: 62  YGHRPIALIGGGTGMIGDPSGRTDMRTMMTRETVQHNIDCIKKQMEKFIDFSDGK--AIL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
            NN  WL  + YI+ +R+IGS FSVNRML+ E  +SR+  E  LSFLEFNYM++Q YDF+
Sbjct: 120 ANNADWLWDLNYIEFIRDIGSHFSVNRMLAAECFKSRM--ENGLSFLEFNYMLMQGYDFL 177

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L K Y C L++GG DQW N+I G++L  + +    FA+T  LLT   G KMGKT  GA+
Sbjct: 178 VLNKKYGCVLELGGDDQWSNMIAGVELIRKKEQKSAFAMTCTLLTNKEGKKMGKTAKGAL 237

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
           WL+ E TSPY F+QYWRN+DDADV      LT +PM E+ R+   Q + INEAKK++A E
Sbjct: 238 WLDPEKTSPYEFYQYWRNVDDADVEKCLSLLTFVPMEEVRRLVSFQDERINEAKKVLAFE 297

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           IT M+HG EEA K+  AA   F     S      ++ K EVS G  LL ++V+     + 
Sbjct: 298 ITKMIHGEEEALKSQKAAEALF-----SGGADLTTVPKLEVSIGEELLNVLVENKVLKTK 352

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
           +E RR ++  A+ + N  +S+    I    F  +G+  L  GKK
Sbjct: 353 SEGRRLMQQGAMTLENEKMSDPAYVITGDSF--SGDALLKLGKK 394


>gi|257452174|ref|ZP_05617473.1| tyrosyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
 gi|317058717|ref|ZP_07923202.1| tyrosyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
 gi|313684393|gb|EFS21228.1| tyrosyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
          Length = 402

 Score =  349 bits (895), Expect = 5e-94,   Method: Compositional matrix adjust.
 Identities = 180/404 (44%), Positives = 248/404 (61%), Gaps = 11/404 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
            +   +L ERG++ Q ++  E+  L  +  VT YIG+D TA SLH GH   +M +  +QK
Sbjct: 2   ENVFHVLQERGYLKQFTHEEEIKALLEKEKVTFYIGFDPTADSLHVGHFIAMMFMAHMQK 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+PI+L+GGGT +IGDPS R + R MM  + +Q NI+ IK     FI +  GK  A++
Sbjct: 62  YGHRPIALIGGGTGMIGDPSGRTDMRTMMTRETVQHNIDCIKKQMEKFIDFSDGK--AIL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
            NN  WL  + YI+ +R+IGS FSVNRML+ E  +SR+  E  LSFLEFNYM++Q YDF+
Sbjct: 120 ANNADWLWDLNYIEFIRDIGSHFSVNRMLAAECFKSRM--ENGLSFLEFNYMLMQGYDFL 177

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L K Y C L++GG DQW N+I G++L  + +    FA+T  LLT   G KMGKT  GA+
Sbjct: 178 VLNKKYGCVLELGGDDQWSNMIAGVELIRKKEQKSAFAMTCTLLTNKEGKKMGKTAKGAL 237

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
           WL+ E TSPY F+QYWRN+DDADV      LT +PM E+ R+   Q + INEAKK++A E
Sbjct: 238 WLDPEKTSPYEFYQYWRNVDDADVEKCLSLLTFVPMEEVRRLVSFQDERINEAKKVLAFE 297

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           IT M+HG EEA K+  AA   F     S      ++ K EVS G  LL ++V+     + 
Sbjct: 298 ITKMIHGEEEALKSQKAAEALF-----SGGADLTTVPKLEVSIGEELLNVLVENKVLKTK 352

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
           +E RR ++  A+ + N  +S+    I    F  +G+  L  GKK
Sbjct: 353 SEGRRLMQQGAMTLENVKMSDPAYVITEDSF--SGDALLKLGKK 394


>gi|325265205|ref|ZP_08131931.1| tyrosine--tRNA ligase [Clostridium sp. D5]
 gi|324029609|gb|EGB90898.1| tyrosine--tRNA ligase [Clostridium sp. D5]
          Length = 407

 Score =  349 bits (895), Expect = 5e-94,   Method: Compositional matrix adjust.
 Identities = 179/400 (44%), Positives = 258/400 (64%), Gaps = 7/400 (1%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I Q+++ + +  L + G  T YIG+D TA SLH GH   L L+  LQ  G+KPI
Sbjct: 7   LQARGLIAQVTDEKLISDLINNGKATFYIGFDPTADSLHVGHFMALCLMKRLQMAGNKPI 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GGGT +IGDPS R + R++M ++ IQ N +  K   S+FI +  GK  A+M+NN  W
Sbjct: 67  ALIGGGTGMIGDPSGRSDLRQVMTTETIQHNCDCFKKQMSNFIDFSEGK--AMMVNNADW 124

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L  + YI++LRE+GS FSVNRML+ E  + R+  E+ L+F+EFNYMI+QAYDF  L + Y
Sbjct: 125 LLDLNYIEVLREVGSHFSVNRMLAAECYKQRM--EKGLTFMEFNYMIMQAYDFYALYQKY 182

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
            C LQ GG DQWGN++ G +L  R       A+T  LL  + G KMGKT SGA+WL+ E 
Sbjct: 183 GCNLQFGGDDQWGNMLAGTELIRRKLGKDASAMTITLLLNSEGNKMGKTQSGAVWLDPEK 242

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVH 311
           TSP++F+QYWRNI DADV+   + LT LP+ EI+ M + +G ++N+AK+I+A E+T M+H
Sbjct: 243 TSPFDFYQYWRNIADADVLKCIRMLTFLPLEEINAMDEWEGSQLNKAKEILAFELTQMIH 302

Query: 312 GREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSR-GMGLLTLIVKAGFATSTNEARR 370
           G+EEAEKA  +A   F    ++  MPT  ++ +++    + +LTL++K+G  TS +EARR
Sbjct: 303 GKEEAEKAQESARTLFSQG-NAAEMPTAELTAEDLQENAVDILTLLLKSGLVTSKSEARR 361

Query: 371 HLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            ++   I ++   +++         F   G I L  GKKN
Sbjct: 362 AVEQGGIAVDGEKVTDIHEVFTADAFAGDGLI-LKKGKKN 400


>gi|291545953|emb|CBL19061.1| tyrosyl-tRNA synthetase [Ruminococcus sp. SR1/5]
          Length = 408

 Score =  348 bits (894), Expect = 7e-94,   Method: Compositional matrix adjust.
 Identities = 172/377 (45%), Positives = 246/377 (65%), Gaps = 7/377 (1%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I Q+++  E+  + + G  T YIG+D TA SLH GH   L L+  LQ  G++PI
Sbjct: 7   LKARGLIAQVTDEDEIKEMVNNGKATFYIGFDPTADSLHVGHFMALCLMKRLQMAGNRPI 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GGGT +IGDPS R + R+M+  + IQ NI+  K   S FI +  GK  ALM+NN  W
Sbjct: 67  ALLGGGTGMIGDPSGRTDMRQMLTKETIQHNIDCFKQQMSRFIDFSDGK--ALMVNNADW 124

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L ++ Y++LLRE+G+ FSVNRML+ E  + R++R   LSFLEFNYMI+Q+YDF  L + Y
Sbjct: 125 LMNLNYVELLREVGAHFSVNRMLTAECYKQRMER--GLSFLEFNYMIMQSYDFYMLYQKY 182

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
            C +Q GG DQW N++ G +L  R      +A+T  LL  + G KMGKT SGA+WL+   
Sbjct: 183 GCNMQFGGDDQWSNMLGGTELIRRKLGKDAYAMTITLLLNSEGKKMGKTQSGAVWLDPNK 242

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVH 311
           TSP++F+QYWRN+DDADV+   + LT LP+ EID MAK +G E+N+AK+I+A ++T +VH
Sbjct: 243 TSPFDFYQYWRNVDDADVIKCMRLLTFLPLEEIDEMAKWEGSELNKAKEILAYQLTELVH 302

Query: 312 GREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSR--GMGLLTLIVKAGFATSTNEAR 369
           G EEA+KA   A   F     + HMPT  +S+++      + L+TL+VKA    S +E R
Sbjct: 303 GEEEAKKAQEGARALFS-GADTSHMPTTELSEEDFDEEGKIDLITLLVKAELVPSRSEGR 361

Query: 370 RHLKSNAIKINNSIISN 386
           R ++   + I+   +++
Sbjct: 362 RAIQQGGVSIDGEKLTD 378


>gi|170756799|ref|YP_001782947.1| tyrosyl-tRNA synthetase [Clostridium botulinum B1 str. Okra]
 gi|254783587|sp|B1IFG0|SYY_CLOBK RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|169122011|gb|ACA45847.1| tyrosyl-tRNA synthetase [Clostridium botulinum B1 str. Okra]
          Length = 407

 Score =  348 bits (894), Expect = 7e-94,   Method: Compositional matrix adjust.
 Identities = 178/406 (43%), Positives = 261/406 (64%), Gaps = 8/406 (1%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+   IL ERG+I Q+++  E+  L  +  ++ YIG+D TA SLH GH  Q+M++  +QK
Sbjct: 2   SNVYDILKERGYIKQLTHEEEIRELLGKEKISFYIGFDPTADSLHVGHFLQMMVMAHMQK 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+PI+L+GGGT +IGDP+ + + R+MM  ++I+ N    K   +  I +   K  A+M
Sbjct: 62  AGHRPIALVGGGTGMIGDPTGKTDMRKMMTKEQIEHNCNCFKKQLAKIIDFSEDK--AIM 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  WL ++ YI+ LREIG  FSVN+ML+ E  +SRL  E+ LSFLEFNYM++Q YDF+
Sbjct: 120 VNNADWLLNLNYIEFLREIGVHFSVNKMLTAECFKSRL--EKGLSFLEFNYMLMQGYDFL 177

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           EL + Y+C +++GG DQW NI+ G+DL  R ++   + +T  LLT + G KMGKT SGA+
Sbjct: 178 ELNRKYNCVMELGGDDQWSNILAGVDLIRRKESKSAYGMTFTLLTNSEGKKMGKTESGAL 237

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
           WL+ E TSPY F+QYWRN+ DADV    + +T LPM E+ R++ L+G EINEAKK++A E
Sbjct: 238 WLDPEKTSPYEFYQYWRNVADADVEKCLRLITFLPMDEVRRLSSLEGAEINEAKKVLAFE 297

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHS-QHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           +T ++HG EEA+KA  AA   F  +     +MPT  I  D+      L+ L+ K     S
Sbjct: 298 VTKLIHGEEEAQKAKIAAEALFGGNAKDLGNMPTAYI--DKNDLNNLLVDLLAKCEIFPS 355

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            +EARR +K   + +N+  +++  L +  +     G I +  GKKN
Sbjct: 356 KSEARRLIKQGGLYLNDEKVTDMNLVVTEEHVTEDG-IMIRRGKKN 400


>gi|148381266|ref|YP_001255807.1| tyrosyl-tRNA synthetase [Clostridium botulinum A str. ATCC 3502]
 gi|153933916|ref|YP_001385642.1| tyrosyl-tRNA synthetase [Clostridium botulinum A str. ATCC 19397]
 gi|153934882|ref|YP_001389048.1| tyrosyl-tRNA synthetase [Clostridium botulinum A str. Hall]
 gi|254783581|sp|A7FYR9|SYY_CLOB1 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|254783585|sp|A5I748|SYY_CLOBH RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|148290750|emb|CAL84881.1| tyrosyl-tRNA synthetase [Clostridium botulinum A str. ATCC 3502]
 gi|152929960|gb|ABS35460.1| tyrosyl-tRNA synthetase [Clostridium botulinum A str. ATCC 19397]
 gi|152930796|gb|ABS36295.1| tyrosine--tRNA ligase [Clostridium botulinum A str. Hall]
          Length = 407

 Score =  348 bits (894), Expect = 8e-94,   Method: Compositional matrix adjust.
 Identities = 179/406 (44%), Positives = 262/406 (64%), Gaps = 8/406 (1%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+   IL ERG+I Q+++  E+  L  +  ++ YIG+D TA SLH GH  Q+M++  +QK
Sbjct: 2   SNVYDILKERGYIKQLTHEEEIRELLGKEKISFYIGFDPTADSLHVGHFLQMMVMAHMQK 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+PI+L+GGGT +IGDP+ + + R+MM  ++I+ N    K   +  I +   K  A+M
Sbjct: 62  AGHRPIALVGGGTGMIGDPTGKTDMRKMMTKEQIEHNCNCFKKQLAKIIDFSEDK--AIM 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  WL ++ YI+ LREIG  FSVN+ML+ E  +SRL  E+ LSFLEFNYM++Q YDF+
Sbjct: 120 VNNADWLLNLNYIEFLREIGVHFSVNKMLTAECFKSRL--EKGLSFLEFNYMLMQGYDFL 177

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           EL + Y+C +++GG DQW NI+ G+DL  R ++   + +T  LLT + G KMGKT SGA+
Sbjct: 178 ELNRKYNCVMELGGDDQWSNILAGVDLIRRKESKSAYGMTFTLLTNSEGKKMGKTESGAL 237

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
           WL+ E TSPY F+QYWRN+ DADV    + +T LPM E+ R++ L+G EINEAKK++A E
Sbjct: 238 WLDPEKTSPYEFYQYWRNVADADVEKCLRLITFLPMDEVRRLSSLEGAEINEAKKVLAFE 297

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHS-QHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           +T ++HG EEA+KA  AA   F  +     +MPT  I  D+      L+ L+VK     S
Sbjct: 298 VTKLIHGEEEAQKAKIAAEALFGGNAKDLGNMPTAYI--DKNDLNNLLVDLLVKCEILPS 355

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            +EARR +K   + +N+  +++  L +  +     G I +  GKKN
Sbjct: 356 KSEARRLIKQGGLYLNDEKVTDMNLVVTEEHVTEDG-IMIRRGKKN 400


>gi|323705684|ref|ZP_08117257.1| tyrosyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum LX-11]
 gi|323534902|gb|EGB24680.1| tyrosyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum LX-11]
          Length = 405

 Score =  348 bits (893), Expect = 9e-94,   Method: Compositional matrix adjust.
 Identities = 182/403 (45%), Positives = 261/403 (64%), Gaps = 7/403 (1%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
             +L ER FI Q+++  E+  L  +  VT YIG+D TA SLH GH  QLM++  +Q+ GH
Sbjct: 4   FDVLKERNFIQQMTHEDEIKELLEKEKVTFYIGFDPTADSLHVGHFLQLMVMAHMQRAGH 63

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           +PI+L+GGGT++IGDP+ + + R+M+  +EI  N E  K   S FI +  GK  A++ NN
Sbjct: 64  RPIALIGGGTAMIGDPTGKTDMRKMLTKEEISHNAEAFKRQMSRFIDFSDGK--AILANN 121

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL ++ Y++ LR+IG  FSVN+ML+ E  + RL+R   LSFLEFNYM++QAYDF+ L 
Sbjct: 122 ADWLLNLNYVEFLRDIGVHFSVNKMLTAECFKMRLER--GLSFLEFNYMLMQAYDFLMLN 179

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
           K Y C LQMGG DQW NI+ G+DL  R +  + + +T  LLTT+ G KMGKT  GAIWL+
Sbjct: 180 KEYGCVLQMGGDDQWSNILAGVDLIRRKEGKQAYGMTFTLLTTSEGKKMGKTEKGAIWLD 239

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITT 308
            + T PY+F+QYWRNIDD+DV      LT LP+ E+ R+  L+ KEINEAKK++A E+T 
Sbjct: 240 ADKTPPYDFYQYWRNIDDSDVEKCLSLLTFLPIDEVRRLGSLKDKEINEAKKVLAYEVTK 299

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
           +VHG +EAEKA  AA   F+      ++PT +I+ D +  G+ LL ++VK G   S +E 
Sbjct: 300 LVHGVDEAEKAKKAAEALFEGRGDLSNVPTSTITSDML--GLNLLDVLVKTGIIPSKSEG 357

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           RR +    + +N+  + +    +  +D    G + L  GKK++
Sbjct: 358 RRLITQGGLYVNDENVKDVN-AVVTEDMFKEGYMILRRGKKSY 399


>gi|153939380|ref|YP_001392669.1| tyrosyl-tRNA synthetase [Clostridium botulinum F str. Langeland]
 gi|168179027|ref|ZP_02613691.1| tyrosyl-tRNA synthetase [Clostridium botulinum NCTC 2916]
 gi|226950749|ref|YP_002805840.1| tyrosine--tRNA ligase [Clostridium botulinum A2 str. Kyoto]
 gi|254783586|sp|C1FLY1|SYY_CLOBJ RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|254783588|sp|A7GIQ9|SYY_CLOBL RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|152935276|gb|ABS40774.1| tyrosine--tRNA ligase [Clostridium botulinum F str. Langeland]
 gi|182670125|gb|EDT82101.1| tyrosyl-tRNA synthetase [Clostridium botulinum NCTC 2916]
 gi|226840771|gb|ACO83437.1| tyrosine--tRNA ligase [Clostridium botulinum A2 str. Kyoto]
 gi|295320653|gb|ADG01031.1| tyrosine--tRNA ligase [Clostridium botulinum F str. 230613]
 gi|322807631|emb|CBZ05206.1| tyrosyl-tRNA synthetase [Clostridium botulinum H04402 065]
          Length = 407

 Score =  348 bits (893), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 179/406 (44%), Positives = 262/406 (64%), Gaps = 8/406 (1%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+   IL ERG+I Q+++  E+  L  +  ++ YIG+D TA SLH GH  Q+M++  +QK
Sbjct: 2   SNVYDILKERGYIKQLTHEEEIRELLGKEKISFYIGFDPTADSLHVGHFLQMMVMAHMQK 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+PI+L+GGGT +IGDP+ + + R+MM  ++I+ N    K   +  I +   K  A+M
Sbjct: 62  AGHRPIALVGGGTGMIGDPTGKTDMRKMMTKEQIEHNCNCFKKQLAKIIDFSEDK--AIM 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  WL ++ YI+ LREIG  FSVN+ML+ E  +SRL  E+ LSFLEFNYM++Q YDF+
Sbjct: 120 VNNADWLLNLNYIEFLREIGVHFSVNKMLTAECFKSRL--EKGLSFLEFNYMLMQGYDFL 177

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           EL + Y+C +++GG DQW NI+ G+DL  R ++   + +T  LLT + G KMGKT SGA+
Sbjct: 178 ELNRKYNCVMELGGDDQWSNILAGVDLIRRKESKSAYGMTFTLLTNSEGKKMGKTESGAL 237

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
           WL+ E TSPY F+QYWRN+ DADV    + +T LPM E+ R++ L+G EINEAKK++A E
Sbjct: 238 WLDPEKTSPYEFYQYWRNVADADVEKCLRLITFLPMDEVRRLSSLEGAEINEAKKVLAFE 297

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHS-QHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           +T ++HG EEA+KA  AA   F  +     +MPT  I  D+      L+ L+VK     S
Sbjct: 298 VTKLIHGEEEAQKAKIAAEALFGGNAKDLGNMPTAYI--DKNDLNNLLVDLLVKCEIFPS 355

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            +EARR +K   + +N+  +++  L +  +     G I +  GKKN
Sbjct: 356 KSEARRLIKQGGLYLNDEKVTDMNLVVTEEHVTEDG-IMIRRGKKN 400


>gi|299143869|ref|ZP_07036949.1| tyrosine--tRNA ligase [Peptoniphilus sp. oral taxon 386 str. F0131]
 gi|298518354|gb|EFI42093.1| tyrosine--tRNA ligase [Peptoniphilus sp. oral taxon 386 str. F0131]
          Length = 408

 Score =  348 bits (893), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 174/400 (43%), Positives = 254/400 (63%), Gaps = 5/400 (1%)

Query: 10  SILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
            IL ERGFI Q + P EL  L S+  V  YIG+D TA SL  GH  Q+ ++  +Q  GHK
Sbjct: 6   DILEERGFIDQATYPEELKELLSKESVPFYIGFDATADSLTLGHFLQVRVMQHMQLAGHK 65

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
           PI+L+GGGT++IGDPS + + R++M  + I+ N  + K   S F+ +   K  A+ +NN 
Sbjct: 66  PIALLGGGTTMIGDPSGKTDMRKIMTKETIEYNAGRFKEQLSHFLDFSDDK--AIFVNNA 123

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
            WL ++ ++D +REIG  FSVNRML+F+  ++R+  E+ L+F EF YM++Q+YDF+ L +
Sbjct: 124 DWLLNLNFLDFMREIGVHFSVNRMLTFDCYKNRM--EKGLTFFEFAYMLMQSYDFLVLYR 181

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
            Y C+L++GGSDQW N++ G +L  +L+  K++++T  LLTTA+G KMGKT  GA+WL+ 
Sbjct: 182 KYGCKLELGGSDQWSNMLGGYELVRKLEDDKVYSMTFKLLTTAAGIKMGKTEKGAVWLDA 241

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTM 309
             TSPY  +QY RN DD DV+ F K LT LPM EI +   L+G E+N AK+++A EI   
Sbjct: 242 SKTSPYEMYQYMRNSDDRDVIKFMKLLTMLPMEEIAKYESLEGAELNTAKEVLAYEIVKD 301

Query: 310 VHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEAR 369
           VHG EEA+KA  AA   F   I+S+++P+  IS  E   G  ++ L+ +     S +E R
Sbjct: 302 VHGEEEAKKAMDAAKSLFSGGINSENIPSTEISSSEFENGKNIVELLKELNLIKSNSEGR 361

Query: 370 RHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
           R ++ N I I++  +      + L DF   G I +  GKK
Sbjct: 362 RLIEQNGITIDDEKVKTFDQMLSLSDF-KDGKILIRKGKK 400


>gi|260438865|ref|ZP_05792681.1| tyrosine--tRNA ligase [Butyrivibrio crossotus DSM 2876]
 gi|292808704|gb|EFF67909.1| tyrosine--tRNA ligase [Butyrivibrio crossotus DSM 2876]
          Length = 405

 Score =  348 bits (892), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 180/400 (45%), Positives = 252/400 (63%), Gaps = 8/400 (2%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I Q+++   +  L + G  T YIG+D TA SLH GH   L L+  LQ+ G+KPI
Sbjct: 7   LQARGLIAQVTDEPLIRDLINNGKATFYIGFDPTADSLHVGHFMALCLMKRLQEAGNKPI 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GGGT++IGDPS R++ R MM  + I  N+E  K   S FI +   K  AL++NN  W
Sbjct: 67  ALIGGGTAMIGDPSGRNDMRSMMTKETINHNVECFKKQMSRFIDFSDDK--ALLVNNADW 124

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L  + Y+DLLRE+G  FSVNRML+ E  + R+  E+ LSFLEFNYMI+Q++DF  L + Y
Sbjct: 125 LLDLNYVDLLREVGPHFSVNRMLTAECYKQRM--EKGLSFLEFNYMIMQSFDFYTLYQKY 182

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
            C LQ GG DQW N++ G +L  R       A+T  LL  + G KMGKT  GA+WL+ E 
Sbjct: 183 GCNLQFGGDDQWSNMLGGTELIRRKLGKDASAMTITLLLNSEGKKMGKTQKGAVWLDPEK 242

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVH 311
           TSPY F+QYWRN+DDADV+   K LT LP+SEI++MA  +G ++NEAK+I+A E+T +VH
Sbjct: 243 TSPYEFFQYWRNVDDADVIKCLKMLTFLPLSEIEKMANWEGSQLNEAKEILAYELTALVH 302

Query: 312 GREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTNEARR 370
           G+EEAEKA  +A   F     + +MPT ++  D    G + L+TL+V  G   + ++ARR
Sbjct: 303 GKEEAEKAKESARSVFGAG-DASNMPTATVDDDCFKDGEVDLITLLVAGGLCQTRSDARR 361

Query: 371 HLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
           +++   + +N    ++ K      +F     I +  GKKN
Sbjct: 362 NIEQGGVTVNGEKETDFKKTYTKDNFGD--GIVIKRGKKN 399


>gi|88608544|ref|YP_506234.1| tyrosyl-tRNA synthetase [Neorickettsia sennetsu str. Miyayama]
 gi|88600713|gb|ABD46181.1| tyrosyl-tRNA synthetase [Neorickettsia sennetsu str. Miyayama]
          Length = 391

 Score =  347 bits (891), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 174/393 (44%), Positives = 259/393 (65%), Gaps = 13/393 (3%)

Query: 9   LSILSERGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           L I+ ERG+  Q ++   L+     G  +  Y+G+D TAS++H GHL  LML+  ++  G
Sbjct: 2   LKIIEERGYFFQCTDREALEHRLHSGEKLVFYLGFDCTASAIHLGHLVPLMLMRLVKSYG 61

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+ I L+GGGT++IGDPS +D+SR+++  +EI  N++ I    S  +K   G  D   +N
Sbjct: 62  HEVIILLGGGTTLIGDPSGKDKSRKILSREEINRNVDTI----SKIVKRVVG--DVRFVN 115

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  I+YID LR +G  FS+NRML+F+SV+SRL RE  LSFLEF+YMILQAYDFVEL
Sbjct: 116 NVDWLEDIRYIDFLRNVGRHFSINRMLTFDSVKSRLDRESHLSFLEFSYMILQAYDFVEL 175

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            + Y+C +Q+GG DQWGNI+ G++LG +L+  +LF LT PL+TTASG KMGKT  GA+WL
Sbjct: 176 NRLYNCSVQVGGGDQWGNIVNGVELGRKLRNTQLFGLTVPLITTASGKKMGKTEEGAVWL 235

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           + ++ SP+++WQY+RN +D+DV  F +  T LP+ EI+ ++     +INEAKK++ATE T
Sbjct: 236 DADLYSPHDYWQYFRNTEDSDVERFLRLFTELPIDEIETLSACDDAQINEAKKVLATEAT 295

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
            + HG   AE+ +T+ ++ F+    SQ +P I      V  G  ++ ++++   A+S  +
Sbjct: 296 RICHGSVIAEEVSTSIIKAFEEDDLSQ-LPEI-----RVPHGANIIDVVIRIEAASSRTQ 349

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG 400
           A+R ++S A+KI+   I    L +  Q   S G
Sbjct: 350 AKRLIESGAVKIDKKKILTYNLDLPEQFVVSVG 382


>gi|291543945|emb|CBL17054.1| tyrosyl-tRNA synthetase [Ruminococcus sp. 18P13]
          Length = 405

 Score =  347 bits (891), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 170/383 (44%), Positives = 252/383 (65%), Gaps = 7/383 (1%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG + Q+++ +E+  L + G  T YIG+D TA SLH GH   L L+  LQ  G+KPI
Sbjct: 7   LKRRGLLAQLTDEKEIKELINAGKATFYIGFDPTADSLHVGHFMALCLMKRLQMAGNKPI 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+GGGT +IGDPS + + R+MM  + I+ N+E  K   S FI +  GK  AL +NN  W
Sbjct: 67  VLLGGGTGMIGDPSGKTDMRKMMTRETIEHNVECFKKQMSRFIDFSEGK--ALAVNNADW 124

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L  + Y+D+LR++G+ FSVN+ML+FE  + R++R   L+FLEFNYMI+Q+YDF  L ++Y
Sbjct: 125 LLDLNYVDVLRDVGACFSVNKMLTFECYKQRMER--GLTFLEFNYMIMQSYDFYRLFQDY 182

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
            C +Q GG DQW N++ G +L  +      +A+T  LL  + G KMGKT  GA+WL+   
Sbjct: 183 GCNMQFGGDDQWANMLGGTELIRKKLGKDAYAMTITLLLNSEGKKMGKTEKGAVWLDPAK 242

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK-LQGKEINEAKKIIATEITTMV 310
           TSPY F+QYWRN++DADV+   K LT +P+ EI+ M + ++G + N+AK+++A E+T +V
Sbjct: 243 TSPYEFYQYWRNVNDADVIKCLKMLTFVPVEEIEDMEQHMEGAQFNKAKELLAYELTKLV 302

Query: 311 HGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSR-GMGLLTLIVKAGFATSTNEAR 369
           HG EEA KA TAA   F    +S  MPT ++S +++   G+G+LTL+VK G A S  E R
Sbjct: 303 HGEEEANKADTAAKAVFSGG-NSADMPTTTLSGEDIPEGGIGILTLLVKCGLAASNGEGR 361

Query: 370 RHLKSNAIKINNSIISNEKLQIK 392
           R ++   I +N++ I++ +  ++
Sbjct: 362 RLVQQGGISVNDAKITDPQTMLQ 384


>gi|149919718|ref|ZP_01908196.1| tyrosyl-tRNA synthetase [Plesiocystis pacifica SIR-1]
 gi|149819489|gb|EDM78919.1| tyrosyl-tRNA synthetase [Plesiocystis pacifica SIR-1]
          Length = 448

 Score =  347 bits (891), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 183/439 (41%), Positives = 268/439 (61%), Gaps = 27/439 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           +P F+S  L +L+ERGFI Q S+   +D   S G+VT Y GYD TA SLHAG L  +M +
Sbjct: 7   LPPFESSALKVLAERGFIEQGSDFAAIDAALSAGMVTFYTGYDPTADSLHAGSLLTIMAM 66

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG- 119
             LQK GH+PI LMGG T+++GDPS R E+R+++ ++ I+ N+  ++  FS F+ + TG 
Sbjct: 67  RHLQKAGHRPIVLMGGATAMVGDPSGRSETRKILTTETIRHNVSALRKQFSRFVHFDTGA 126

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
             DAL+++N  WL  ++YI+ LR+IG  F+VNRM++ ++ R RL+ E  LSFLEFNY +L
Sbjct: 127 DNDALLVDNADWLLGVRYIEFLRDIGRHFTVNRMIAAKTYRDRLEGELPLSFLEFNYQLL 186

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL----------------GERLKTP-KLF 222
           QAYDF+ L + +DCR+Q+GGSDQWGN+I G++L                GE    P   +
Sbjct: 187 QAYDFLHLMREHDCRMQVGGSDQWGNMIAGVELIRRVAADHNKAQGQDPGEADAAPAHAY 246

Query: 223 ALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMS 282
            LT PLLTTA G KMGKT  GA+WL+ E  SPY+++QYW N  D DV +  +  T LPM 
Sbjct: 247 CLTYPLLTTADGGKMGKTAKGAVWLDPERYSPYDYYQYWINCHDRDVETLLRVFTELPMD 306

Query: 283 EIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISIS 342
           ++  +A  +GK +NE+K ++A E T ++HG +EA +A TA  + F        +P I + 
Sbjct: 307 QVRELASREGKALNESKAMLAYEATRLLHGEDEAARARTATAQAFGKGEDWSALPLIEVP 366

Query: 343 KDEVSRGMGLLTLIVKA---GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDST 399
            + +     LL L+V     GF  S  +AR  +KS A+KI+   +++    I  +     
Sbjct: 367 GESIK----LLDLVVHEAVKGF-KSKRDARERIKSGAVKIDGESVTDVNEVITAERCGED 421

Query: 400 GNIKLSFGKKNHIICHLCG 418
           G ++L  G+K  +   L G
Sbjct: 422 G-LRLQTGRKRRLRVKLSG 439


>gi|160895404|ref|ZP_02076174.1| hypothetical protein CLOL250_02962 [Clostridium sp. L2-50]
 gi|156862975|gb|EDO56406.1| hypothetical protein CLOL250_02962 [Clostridium sp. L2-50]
          Length = 413

 Score =  347 bits (890), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 175/400 (43%), Positives = 252/400 (63%), Gaps = 7/400 (1%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I Q ++  E+  L + G    YIG+D TA SLH GH   L L+  LQ  G+KPI
Sbjct: 14  LVARGLIAQTTDEEEIKELVNNGKAVFYIGFDPTADSLHVGHFMALCLMKRLQMAGNKPI 73

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GGGT++IGDPS R + R+MM ++ I  N+E  K   S FI +  GK  AL++NN  W
Sbjct: 74  ALIGGGTAMIGDPSGRTDMRQMMTTETIAHNVECFKKQMSRFIDFSEGK--ALLVNNADW 131

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L  + Y+D+LRE+G  FSVN ML  E  + R+  E+ LSFLEFNYMI+Q+YDF EL + Y
Sbjct: 132 LLDLNYVDVLREVGPHFSVNNMLRAECYKQRM--EKGLSFLEFNYMIMQSYDFYELFQKY 189

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
            C +Q GG DQW N++ G +L  R      +A+T  LL  + G KMGKT  GA+WL+   
Sbjct: 190 GCNMQFGGDDQWSNMLGGTELIRRKLGKDAYAMTITLLLNSEGKKMGKTQKGAVWLDPNK 249

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVH 311
           TSP+ F+QYWRN+ DADV+   + LT LP+ EID+M   +G ++N AK+I+A E+T +VH
Sbjct: 250 TSPFEFYQYWRNVADADVLKCIRMLTFLPLEEIDKMDSWEGSQLNTAKEILAFELTKLVH 309

Query: 312 GREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTNEARR 370
           G EEA KA  +A   F   + +  MP++++S D+   G + +++++VK+G  +S NE RR
Sbjct: 310 GEEEAVKAQESARALFSQGV-AADMPSVTLSADDFKDGAIDIVSVLVKSGLVSSRNEGRR 368

Query: 371 HLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            ++   + ++   I +  + I  + FD  G I +  GKKN
Sbjct: 369 AVEQGGVAVDGDKIPDISVTIPEEKFDGDG-IVVRRGKKN 407


>gi|331091728|ref|ZP_08340562.1| tyrosyl-tRNA synthetase [Lachnospiraceae bacterium 2_1_46FAA]
 gi|330403485|gb|EGG83044.1| tyrosyl-tRNA synthetase [Lachnospiraceae bacterium 2_1_46FAA]
          Length = 407

 Score =  347 bits (889), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 180/400 (45%), Positives = 250/400 (62%), Gaps = 7/400 (1%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I Q+++   +  L ++G  T YIG+D TA SLH GH   L L+  LQ  G+KPI
Sbjct: 7   LKARGLIAQVTDEELISNLVNEGKATFYIGFDPTADSLHVGHFMALCLMKRLQMAGNKPI 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GGGT  IGDPS R + R MM  ++IQ N +  K   S FI +  GK  ALM+NN  W
Sbjct: 67  ALLGGGTGYIGDPSGRSDMRSMMTPEQIQHNCDCFKKQMSKFIDFSEGK--ALMINNADW 124

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L  + Y++LLRE+G  FSVNRML+ E  + R+  E+ LSFLEFNYMI+QAYDF  L +NY
Sbjct: 125 LLGLNYVELLREVGPHFSVNRMLTAECYKQRM--EKGLSFLEFNYMIMQAYDFYALYQNY 182

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
            C LQ GG DQW N++ G +L  R       A+T  LL  + G KMGKT SGA+WL+   
Sbjct: 183 GCNLQFGGDDQWSNMLAGTELIRRKLGKDASAMTITLLLNSEGKKMGKTQSGAVWLDPNK 242

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVH 311
           TSP+ F+QYWRN+ D DV+   + LT LP+ EID M K +G ++N+AK+I+A E+T +VH
Sbjct: 243 TSPFEFYQYWRNVADNDVLKCIRMLTFLPLEEIDEMDKWEGSQLNKAKEILAFELTKLVH 302

Query: 312 GREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTNEARR 370
           G EEA KA  ++ E F  S  + +MPT  + + +   G + +LT++VK+G   S +EARR
Sbjct: 303 GEEEALKAQESSRELF-TSGAAANMPTAELEEGDFVEGKIDILTMLVKSGLVPSKSEARR 361

Query: 371 HLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            ++   + ++   + + K +    D    G + L  GKKN
Sbjct: 362 AVQQGGVAVDGEKVEDIKKEYAKDDLSGEG-VVLRRGKKN 400


>gi|182419105|ref|ZP_02950359.1| tyrosyl-tRNA synthetase [Clostridium butyricum 5521]
 gi|237669225|ref|ZP_04529207.1| tyrosine--tRNA ligase [Clostridium butyricum E4 str. BoNT E BL5262]
 gi|182377060|gb|EDT74630.1| tyrosyl-tRNA synthetase [Clostridium butyricum 5521]
 gi|237655112|gb|EEP52670.1| tyrosine--tRNA ligase [Clostridium butyricum E4 str. BoNT E BL5262]
          Length = 406

 Score =  347 bits (889), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 178/406 (43%), Positives = 258/406 (63%), Gaps = 7/406 (1%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           ++ L  L ERG+I Q ++  E   L     +T YIG+D TA SLH GH   +M +  +QK
Sbjct: 2   ANVLDELLERGYIKQFTHEEETRRLLENEKITFYIGFDPTADSLHVGHFIAMMFMAHMQK 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+PI+L+GGGT++IGDPS + + R+MM  + IQ N++ IK     FI +   K  AL+
Sbjct: 62  AGHRPIALIGGGTAMIGDPSGKTDMRQMMTKETIQHNVDSIKKQMERFIDFSDDK--ALI 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  WL ++ Y+D LRE+G  FSVNRML+ E  + RL  E+ LSFLEFNYM++Q YDF 
Sbjct: 120 VNNADWLLNLNYVDFLREVGVHFSVNRMLTAECFKQRL--EKGLSFLEFNYMLMQGYDFY 177

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L + Y+C++++GG DQW N+I G++L  R    +  A+T  LLT + G KMGKT+ GA+
Sbjct: 178 VLNQQYNCKMELGGDDQWSNMIAGVELVRRKAQGQAMAMTCTLLTNSQGQKMGKTVGGAL 237

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
           WLN E TSPY+F+QYWRN+DDADV      LT LPM E+ R+  L+G EIN AKK++A E
Sbjct: 238 WLNPEKTSPYDFYQYWRNVDDADVEKCLALLTFLPMDEVRRLGALEGAEINNAKKVLAFE 297

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           +T +VHG EEA+KA  AA   F       ++PT+SI+K+E+  G  ++ ++       S 
Sbjct: 298 VTKLVHGEEEAKKAEEAATALFAGGADMSNVPTVSITKEEL--GSSIIDIMASTKILPSK 355

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
            E RR ++   + +N   +++    +  +DF+  G   +  GKKN+
Sbjct: 356 KEGRRLVEQGGLSLNGEKVTDVSRVLTEEDFED-GIALIKRGKKNY 400


>gi|330838923|ref|YP_004413503.1| Tyrosyl-tRNA synthetase [Selenomonas sputigena ATCC 35185]
 gi|329746687|gb|AEC00044.1| Tyrosyl-tRNA synthetase [Selenomonas sputigena ATCC 35185]
          Length = 406

 Score =  347 bits (889), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 179/406 (44%), Positives = 258/406 (63%), Gaps = 7/406 (1%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           ++   +L ERGFI Q ++   +  L  +  VT Y G+D TA SLH GH   LM +  +Q+
Sbjct: 2   ANVFDVLKERGFIAQCTDEEGVRELLGKESVTFYTGFDPTADSLHVGHFLGLMAMSHMQR 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+P+ L+GGGT  +GDPS R + RRM+  ++I+ N +  K   + FI +  GK  ALM
Sbjct: 62  AGHRPVCLVGGGTGTVGDPSGRTDMRRMLTDEDIEHNCDCFKKQIARFIDFSEGK--ALM 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  WL  + YI+LLRE+G+ F+VNRMLS E+ ++R   E+ L+FLEFNYM++QAYDF+
Sbjct: 120 VNNGDWLRKLNYIELLREVGAHFTVNRMLSAEAYKTRW--EKGLTFLEFNYMVMQAYDFL 177

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           EL+    C+LQMGG DQW NII G++L  R +    + LT  LLT + G KMGKT  GA+
Sbjct: 178 ELSHRCGCKLQMGGDDQWSNIIAGVELIRRKEAKPAYGLTFTLLTKSDGQKMGKTAGGAL 237

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
           WL+ E TSPY+F+QYWRNIDDADV      LT LPM E+ R+  L+   INEAK ++A E
Sbjct: 238 WLDAEKTSPYDFYQYWRNIDDADVEKCLALLTFLPMEEVRRLGALRDAAINEAKTVLAYE 297

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           +T +VHG  EA+KA   A   F     S  +PT +++ +E+  G  LL ++ K G  +S 
Sbjct: 298 VTKLVHGEAEAKKAKEGAEAMFGRGAASAELPTFTLTAEEM--GAKLLDILAKNGVFSSK 355

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           +E RR +    + +N++ +++   +++ +DF S G   +  GKK H
Sbjct: 356 SEGRRLISQGGVTLNDARVTDADYRLQEEDF-SDGTALVKKGKKKH 400


>gi|260887324|ref|ZP_05898587.1| tyrosine--tRNA ligase [Selenomonas sputigena ATCC 35185]
 gi|260862960|gb|EEX77460.1| tyrosine--tRNA ligase [Selenomonas sputigena ATCC 35185]
          Length = 414

 Score =  347 bits (889), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 179/406 (44%), Positives = 258/406 (63%), Gaps = 7/406 (1%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           ++   +L ERGFI Q ++   +  L  +  VT Y G+D TA SLH GH   LM +  +Q+
Sbjct: 10  ANVFDVLKERGFIAQCTDEEGVRELLGKESVTFYTGFDPTADSLHVGHFLGLMAMSHMQR 69

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+P+ L+GGGT  +GDPS R + RRM+  ++I+ N +  K   + FI +  GK  ALM
Sbjct: 70  AGHRPVCLVGGGTGTVGDPSGRTDMRRMLTDEDIEHNCDCFKKQIARFIDFSEGK--ALM 127

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  WL  + YI+LLRE+G+ F+VNRMLS E+ ++R   E+ L+FLEFNYM++QAYDF+
Sbjct: 128 VNNGDWLRKLNYIELLREVGAHFTVNRMLSAEAYKTRW--EKGLTFLEFNYMVMQAYDFL 185

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           EL+    C+LQMGG DQW NII G++L  R +    + LT  LLT + G KMGKT  GA+
Sbjct: 186 ELSHRCGCKLQMGGDDQWSNIIAGVELIRRKEAKPAYGLTFTLLTKSDGQKMGKTAGGAL 245

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
           WL+ E TSPY+F+QYWRNIDDADV      LT LPM E+ R+  L+   INEAK ++A E
Sbjct: 246 WLDAEKTSPYDFYQYWRNIDDADVEKCLALLTFLPMEEVRRLGALRDAAINEAKTVLAYE 305

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           +T +VHG  EA+KA   A   F     S  +PT +++ +E+  G  LL ++ K G  +S 
Sbjct: 306 VTKLVHGEAEAKKAKEGAEAMFGRGAASAELPTFTLTAEEM--GAKLLDILAKNGVFSSK 363

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           +E RR +    + +N++ +++   +++ +DF S G   +  GKK H
Sbjct: 364 SEGRRLISQGGVTLNDARVTDADYRLQEEDF-SDGTALVKKGKKKH 408


>gi|289450632|ref|YP_003475585.1| tyrosine--tRNA ligase [Clostridiales genomosp. BVAB3 str. UPII9-5]
 gi|289185179|gb|ADC91604.1| tyrosine--tRNA ligase [Clostridiales genomosp. BVAB3 str. UPII9-5]
          Length = 424

 Score =  347 bits (889), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 178/407 (43%), Positives = 256/407 (62%), Gaps = 6/407 (1%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           +++   ILSERG+I Q ++P E+  L S+  VT YIG+D TA SLHAGH  Q+M++  +Q
Sbjct: 18  ETNIYDILSERGYIAQCTHPEEVRKLLSKPGVTFYIGFDPTADSLHAGHFIQVMIMAHMQ 77

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           K GH+PI+LMGGGT +IGDPS R + R+MM  + +Q N++ IK   S  I++G GK  A 
Sbjct: 78  KAGHRPIALMGGGTGMIGDPSGRSDLRKMMTRETVQHNVDCIKAQMSRLIEFGPGK--AT 135

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           + NN  WL ++ YID LRE G  FSVNRML+ E  + RL  E  L+FLEFNYM++QAYDF
Sbjct: 136 IANNADWLLNLNYIDFLREFGPCFSVNRMLTAECYKKRL--EVGLTFLEFNYMLMQAYDF 193

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
            +L ++ +CRL++GG DQW NI+ G DL  R    + + LT  LLTT+ G KMGKT +GA
Sbjct: 194 YKLHESMNCRLELGGDDQWSNILAGTDLIRRKTGEETYGLTFRLLTTSEGIKMGKTANGA 253

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WL+ +   P+ F+Q+WRNI DADV++  K +T + M EI    KL+G EIN AKK +A 
Sbjct: 254 LWLDPDKCPPFEFYQFWRNIADADVINCLKMVTFVSMDEIRAYEKLEGSEINTAKKRLAF 313

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E+T ++HG E A +    A+E F+    SQ M T  +   ++ +   +L  ++      S
Sbjct: 314 EVTKLIHGEEIAAQCQQQAIELFEGGGRSQSMETAELGSSDLGK-TTILDSLLAVKLIPS 372

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
             E RR ++ N + +N  +I++        DF + G   +  GKK +
Sbjct: 373 KGEGRRLMQQNGLFLNEKVIADFSRTWCADDF-ANGEAIIRKGKKKY 418


>gi|240145172|ref|ZP_04743773.1| tyrosine--tRNA ligase [Roseburia intestinalis L1-82]
 gi|257202852|gb|EEV01137.1| tyrosine--tRNA ligase [Roseburia intestinalis L1-82]
 gi|291537628|emb|CBL10740.1| tyrosyl-tRNA synthetase [Roseburia intestinalis M50/1]
 gi|291537764|emb|CBL10875.1| tyrosyl-tRNA synthetase [Roseburia intestinalis XB6B4]
          Length = 408

 Score =  346 bits (888), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 176/402 (43%), Positives = 254/402 (63%), Gaps = 6/402 (1%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I Q+++  E+  L + G  T YIG+D TA SLH GH   L L+  LQ  G+KPI
Sbjct: 7   LVARGLIAQVTDEAEIKDLINNGKATFYIGFDPTADSLHVGHFMALCLMKRLQMAGNKPI 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GGGT++IGDPS R + R+MM  + IQ N +  K   S FI +  GK  ALM+NN  W
Sbjct: 67  ALIGGGTAMIGDPSGRTDMRQMMTPETIQHNCDCFKKQMSRFIDFSDGK--ALMVNNADW 124

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L  + YID+LRE+G+ FSVNRML+ E  + R+  E+ LSFLEFNYMI+Q+YDF  L + Y
Sbjct: 125 LMDLNYIDVLREVGAHFSVNRMLTAECYKQRM--EKGLSFLEFNYMIMQSYDFYTLYQKY 182

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
            C ++ GG DQW N++ G +L  R      +A+T  LL  + G KMGKT SGA+WL+   
Sbjct: 183 GCNMEFGGDDQWSNMLGGTELIRRKLGKDAYAMTINLLLNSEGKKMGKTQSGAVWLDPNK 242

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVH 311
           TSP++F+QYWRN+ DADV+   + LT LP+ EID M   +G ++N+AK+I+A E+T +VH
Sbjct: 243 TSPFDFFQYWRNVSDADVLKCIRMLTFLPLEEIDAMESWEGAQLNQAKEILAFELTKLVH 302

Query: 312 GREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTNEARR 370
           G EEA KA  A+   F     S HMPT+ ++  + + G + +L L+VKA  A S ++ARR
Sbjct: 303 GEEEANKAKEASHALFAGGGDSAHMPTLELTAADFADGDLDILALLVKAELAPSRSDARR 362

Query: 371 HLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
            ++   + + +  +++ +       F + G + +  GKK  +
Sbjct: 363 AVQQGGVSVADEKVTDIQTTYGADAFGADG-LVVKRGKKKFV 403


>gi|303233835|ref|ZP_07320488.1| tyrosine--tRNA ligase [Finegoldia magna BVS033A4]
 gi|302495030|gb|EFL54783.1| tyrosine--tRNA ligase [Finegoldia magna BVS033A4]
          Length = 415

 Score =  346 bits (888), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 168/387 (43%), Positives = 248/387 (64%), Gaps = 4/387 (1%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG+  Q +   EL  L  +  V  YIG+D TA SL  GH  QLM++  +Q  GH PI
Sbjct: 15  LVARGYFEQATYEDELRDLLGKERVPFYIGFDATADSLTIGHFIQLMVMMRMQAHGHIPI 74

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+GGGT++IGDPS R++ R +M  + I EN  +     + FI +G  K  A + NN+ W
Sbjct: 75  CLLGGGTTMIGDPSGRNDMRSIMTKEVIDENARRFYSQMTRFIDFGEDK--AYIENNKDW 132

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L ++ ++D +REIG  FSVN+ML+ ES ++R+K  Q L+F EF+YM++Q+YD++ L + Y
Sbjct: 133 LLNLNFLDFMREIGVHFSVNQMLTLESYKNRMK--QGLTFFEFSYMLMQSYDYLVLYRKY 190

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
            C+LQMGGSDQW NI+ G DL  +L+  K++A+T  LLTTA G KMGK+  GA+WL++  
Sbjct: 191 GCKLQMGGSDQWSNILGGYDLVRKLENDKVYAMTFKLLTTADGVKMGKSQKGAVWLDENK 250

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVH 311
           T+PY+ +QY RN+DD DV  F   LT LP  E  R+  L+G EIN+AK+++A E+  +VH
Sbjct: 251 TTPYDLFQYMRNVDDRDVEKFLLMLTFLPTDECKRLGSLEGSEINKAKEVLAFEVCKLVH 310

Query: 312 GREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRH 371
           G E+AE+A   A   F+ ++  ++MPT  +   +   G+GLL L+   G   S +EARR 
Sbjct: 311 GEEKAEEARQTANALFNSNVVDENMPTTEMKALDFENGIGLLNLLTMTGLTQSNSEARRL 370

Query: 372 LKSNAIKINNSIISNEKLQIKLQDFDS 398
           +  N I +N++  ++ K  I + DF+ 
Sbjct: 371 VTQNGISVNDNKEADPKRVITIHDFND 397


>gi|160938370|ref|ZP_02085725.1| hypothetical protein CLOBOL_03268 [Clostridium bolteae ATCC
           BAA-613]
 gi|158438743|gb|EDP16500.1| hypothetical protein CLOBOL_03268 [Clostridium bolteae ATCC
           BAA-613]
          Length = 408

 Score =  346 bits (887), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 174/400 (43%), Positives = 252/400 (63%), Gaps = 6/400 (1%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I Q++N  E+  + ++G    YIG+D TA SLH GH   L L+  LQ  G+KPI
Sbjct: 7   LVARGLIAQVTNEEEIKKMVNEGKAVFYIGFDPTADSLHVGHFMALCLMKRLQMAGNKPI 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GGGT +IGDPS R + R MM  + IQ N +  K   S FI +  GK  A+M+NN  W
Sbjct: 67  ALIGGGTGMIGDPSGRSDMRTMMTPEIIQHNCDCFKKQMSRFIDFSEGK--AMMVNNAEW 124

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L  + YI+ LRE+G  FSVN ML  E  + R+  E+ LSFLEFNYMI+Q+YDF EL K Y
Sbjct: 125 LMGLNYIEFLREVGPHFSVNNMLRAECYKQRM--EKGLSFLEFNYMIMQSYDFYELFKRY 182

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
            C +Q GG DQW N++ G +L  R       A+T  LL  + G KMGKT SGA+WL+ E 
Sbjct: 183 GCNMQFGGDDQWSNMLGGTELIRRKLGKDAHAMTITLLLNSEGKKMGKTQSGAVWLDPEK 242

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVH 311
           TSP++F+QYWRN+ D+DV+   + LT LP+ +ID M + +G  +N+AK+I+A E+T +VH
Sbjct: 243 TSPFDFYQYWRNVGDSDVLKCLRMLTFLPLEQIDEMDQWEGSRLNQAKEILAFELTKLVH 302

Query: 312 GREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTNEARR 370
           G EEA KA   A   F     +++MPT  +S+++ + G + +L+++ K+G A S +EARR
Sbjct: 303 GEEEAAKAQEGARALFAAGASTENMPTFELSEEDFTDGTIDILSILNKSGLAASRSEARR 362

Query: 371 HLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
           +++   + ++ + + + K     + F   G + +  GKKN
Sbjct: 363 NVEQGGVSVDGNPVKDIKAVFSREQFAGDG-VVVKRGKKN 401


>gi|169825148|ref|YP_001692759.1| tyrosyl-tRNA synthetase [Finegoldia magna ATCC 29328]
 gi|167831953|dbj|BAG08869.1| tyrosyl-tRNA synthetase [Finegoldia magna ATCC 29328]
          Length = 415

 Score =  346 bits (887), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 168/387 (43%), Positives = 248/387 (64%), Gaps = 4/387 (1%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG+  Q +   EL  L  +  V  YIG+D TA SL  GH  QLM++  +Q  GH PI
Sbjct: 15  LVARGYFEQATYEDELRDLLGKERVPFYIGFDATADSLTIGHFIQLMVMMRMQAHGHIPI 74

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+GGGT++IGDPS R++ R +M  + I EN  +     + FI +G  K  A + NN+ W
Sbjct: 75  CLLGGGTTMIGDPSGRNDMRSIMTKEVIDENARRFYSQMTRFIDFGDDK--AYIENNKDW 132

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L ++ ++D +REIG  FSVN+ML+ ES ++R+K  Q L+F EF+YM++Q+YD++ L + Y
Sbjct: 133 LLNLNFLDFMREIGVHFSVNQMLTLESYKNRMK--QGLTFFEFSYMLMQSYDYLVLYRKY 190

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
            C+LQMGGSDQW NI+ G DL  +L+  K++A+T  LLTTA G KMGK+  GA+WL++  
Sbjct: 191 GCKLQMGGSDQWSNILGGYDLVRKLENDKVYAMTFKLLTTADGVKMGKSQKGAVWLDENK 250

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVH 311
           T+PY+ +QY RN+DD DV  F   LT LP  E  R+  L+G EIN+AK+++A E+  +VH
Sbjct: 251 TTPYDLFQYMRNVDDRDVEKFLLMLTFLPTDECKRLGSLEGSEINKAKEVLAFEVCKLVH 310

Query: 312 GREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRH 371
           G E+AE+A   A   F+ ++  ++MPT  +   +   G+GLL L+   G   S +EARR 
Sbjct: 311 GEEKAEEARQTANALFNSNVVDENMPTTEMKALDFENGIGLLNLLTMTGLTQSNSEARRL 370

Query: 372 LKSNAIKINNSIISNEKLQIKLQDFDS 398
           +  N I +N++  ++ K  I + DF+ 
Sbjct: 371 VTQNGISVNDNKEADPKRVITIHDFND 397


>gi|301059196|ref|ZP_07200134.1| tyrosine--tRNA ligase [delta proteobacterium NaphS2]
 gi|300446686|gb|EFK10513.1| tyrosine--tRNA ligase [delta proteobacterium NaphS2]
          Length = 413

 Score =  346 bits (887), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 178/381 (46%), Positives = 239/381 (62%), Gaps = 7/381 (1%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + L +   RGF  Q ++   L  + +Q   T YIG+D TA SLH G L  +M L  +Q  
Sbjct: 3   NILEVFEARGFFEQSTDEVSLSQMLTQ-PTTCYIGFDPTAKSLHVGSLLPIMSLVHMQNA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+P+ L+GGGT+++GDPS + E RR+M  +EI EN   +K   S+FI +   +  A+M+
Sbjct: 62  GHRPVVLVGGGTALVGDPSGKTEMRRIMSREEINENAMGLKRQLSNFIDFNNDR--AVMV 119

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  + Y+D LR+IG  FSVNRML+ ES + R+  E  LSF+EFNYM+LQAYDF  
Sbjct: 120 NNADWLAELNYVDFLRDIGRHFSVNRMLAAESYKMRM--ETGLSFIEFNYMLLQAYDFWH 177

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L K YDCRLQMGG+DQWGNI+ G DL  RL+   +  LT PLLTTASG KMGKT  GA+W
Sbjct: 178 LFKYYDCRLQMGGNDQWGNILAGADLIRRLEGEVVHGLTFPLLTTASGIKMGKTHKGAVW 237

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           L+ EMTSPY+++QYW N DD D+  F    T L M EI+R+ KL+G EI +AKKI+A E 
Sbjct: 238 LDAEMTSPYDYYQYWVNQDDGDIGRFLALFTLLDMDEINRLNKLKGSEIRDAKKILAYEA 297

Query: 307 TTMVHGREEAEKAATAAMECFDMSI--HSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           T + HG+E A++A  AA   F  S     +  P+  I ++ +  G+    L   AG   +
Sbjct: 298 TRLCHGKENADQARAAAEGLFGGSKGGSDKSAPSYEIGRETLEDGIPAYILFENAGLCKT 357

Query: 365 TNEARRHLKSNAIKINNSIIS 385
             EARR +      +N+  IS
Sbjct: 358 RGEARRLISQGGGYLNDRKIS 378


>gi|226322907|ref|ZP_03798425.1| hypothetical protein COPCOM_00679 [Coprococcus comes ATCC 27758]
 gi|225208693|gb|EEG91047.1| hypothetical protein COPCOM_00679 [Coprococcus comes ATCC 27758]
          Length = 407

 Score =  346 bits (887), Expect = 5e-93,   Method: Compositional matrix adjust.
 Identities = 179/400 (44%), Positives = 253/400 (63%), Gaps = 7/400 (1%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I Q+++   +  L + G  T YIG+D TA SLH GH   L L+  LQ+ G+KPI
Sbjct: 7   LKARGLIAQVTDEPLIRDLVNNGKATFYIGFDPTADSLHVGHFMALCLMKRLQEAGNKPI 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GGGT++IGDPS R + R+MM  + IQ N +  K   S FI +  GK  ALM+NN  W
Sbjct: 67  ALIGGGTAMIGDPSGRTDMRQMMTPETIQHNCDCFKKQMSRFIDFSDGK--ALMVNNADW 124

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L  + Y+++LRE+G+ FSVNRML+ E  + R+  E+ LSFLEFNYMI+Q+YDF  L + Y
Sbjct: 125 LMDLNYVEVLREVGAHFSVNRMLTAECYKQRM--EKGLSFLEFNYMIMQSYDFYMLYQKY 182

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
            C LQ GG DQW N++ G +L  R       A+T  LL  + G KMGKT SGA+WL+ E 
Sbjct: 183 GCNLQFGGDDQWSNMLGGTELIRRKLGKDASAMTITLLLNSEGKKMGKTQSGAVWLDPEK 242

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVH 311
           TSP+ F+QYWRN+ DADV+   + LT LP+ +ID M K +G ++N AK+I+A E+T +VH
Sbjct: 243 TSPFEFYQYWRNVADADVLKCLRMLTFLPLEQIDEMDKWEGAQLNTAKEILAFELTKLVH 302

Query: 312 GREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTNEARR 370
           G EEA KA   A   F  S ++  MPT  +S ++ + G + +LTL+ K+G   S +EARR
Sbjct: 303 GEEEATKAQEGARALFS-SGNAADMPTAELSDEDFADGSVDILTLLHKSGLVASKSEARR 361

Query: 371 HLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            ++   + ++   +S+        DF+  G + +  GKKN
Sbjct: 362 AVQQGGVAVDGEKVSDIATTFAKADFEGEGKV-VRKGKKN 400


>gi|210611476|ref|ZP_03288912.1| hypothetical protein CLONEX_01102 [Clostridium nexile DSM 1787]
 gi|210151976|gb|EEA82983.1| hypothetical protein CLONEX_01102 [Clostridium nexile DSM 1787]
          Length = 407

 Score =  345 bits (885), Expect = 7e-93,   Method: Compositional matrix adjust.
 Identities = 180/400 (45%), Positives = 252/400 (63%), Gaps = 7/400 (1%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I Q+++   +  L ++G  T YIG+D TA SLH GH   L L+  LQ  G+KPI
Sbjct: 7   LKARGLIAQVTDEELISNLINEGKATFYIGFDPTADSLHVGHFMALCLMKRLQMAGNKPI 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GGGT  IGDPS R + R MM  ++IQ N +  K   S FI +  GK  A+M+NN  W
Sbjct: 67  ALIGGGTGYIGDPSGRTDMRSMMTPEQIQHNCDCFKEQMSKFIDFSEGK--AMMVNNADW 124

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L  + YI+LLRE+G+ FSVNRML+ E  + R+  E+ LSFLEFNYMI+QAYDF  L + Y
Sbjct: 125 LLDLNYIELLREVGAHFSVNRMLTAECYKQRM--EKGLSFLEFNYMIMQAYDFYALYQKY 182

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
            C LQ GG DQW N++ G +L  R       A+T  LL  + G KMGKT SGA+WL+   
Sbjct: 183 GCNLQFGGDDQWSNMLAGTELIRRKLGKDASAMTITLLLNSEGKKMGKTQSGAVWLDPNK 242

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVH 311
           TSP+ F+QYWRN+ DADV+   + LT LP+ EID+M   +G ++N+AK+I+A E+T +VH
Sbjct: 243 TSPFEFYQYWRNVADADVLKCIRMLTFLPLEEIDKMDDWEGSQLNQAKEILAFELTKLVH 302

Query: 312 GREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTNEARR 370
           G EEA KA  +A   F  S  + +MPT  ++++++  G + +LT++VK+G   S +EARR
Sbjct: 303 GEEEATKAQESARALFS-SGAAANMPTAELTEEDLVNGSIDILTMLVKSGLVPSKSEARR 361

Query: 371 HLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            +    + ++   +++ K       F   G I L  GKKN
Sbjct: 362 AVDQGGVAVDGDKVTDIKAVFAKDVFAGEG-IVLRRGKKN 400


>gi|317056427|ref|YP_004104894.1| tyrosyl-tRNA synthetase [Ruminococcus albus 7]
 gi|315448696|gb|ADU22260.1| tyrosyl-tRNA synthetase [Ruminococcus albus 7]
          Length = 406

 Score =  345 bits (885), Expect = 8e-93,   Method: Compositional matrix adjust.
 Identities = 175/387 (45%), Positives = 257/387 (66%), Gaps = 7/387 (1%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I Q+++ +EL+ L + G  T YIG+D TA SLH GH   L L+  LQ  G+KPI
Sbjct: 7   LKRRGLIAQMTDEKELEELINNGKATFYIGFDPTADSLHVGHFMALCLMKRLQMAGNKPI 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GGGT +IGDPS + + R+M+  + IQ N E  K   S FI +  GK  ALM+NN  W
Sbjct: 67  ALVGGGTGMIGDPSGKTDMRKMLTPETIQHNCECFKKQMSKFIDFSDGK--ALMVNNGDW 124

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L ++ Y+D+LRE+G+ FSVN+ML+FE  + R++R   L+FLEFNYMI+Q+YDF  L ++Y
Sbjct: 125 LLNLNYVDVLREVGACFSVNKMLTFECYKQRMER--GLTFLEFNYMIMQSYDFYRLFQDY 182

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
            C +Q GG DQW N++ G +L  +      +A+T  LL  + G KMGKT  GA+WL+ E 
Sbjct: 183 GCNMQFGGDDQWANMLGGTELIRKKLGKDAYAMTITLLLNSEGKKMGKTEKGAVWLDAEK 242

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK-LQGKEINEAKKIIATEITTMV 310
           TSPY+F+QYWRN+DDADV+   K LT +P+ +I+ M + ++G E N+AK+++A E+T ++
Sbjct: 243 TSPYDFYQYWRNVDDADVIKCLKLLTFVPIEQIEEMEQHMEGAEYNKAKELLAFELTKLI 302

Query: 311 HGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV--SRGMGLLTLIVKAGFATSTNEA 368
           HG EEA+KA  AA   F     S  MP ++++ D+V  ++ +G+L L+VK+G A S  EA
Sbjct: 303 HGEEEAQKADAAAKAIFGGGADSADMPAVTLTADDVDENKQIGILNLLVKSGLAPSNGEA 362

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQD 395
           RR ++ N I +N    ++ K  + L +
Sbjct: 363 RRLVQQNGIAVNGEKFTDPKGMVDLSE 389


>gi|254796724|ref|YP_003081560.1| tyrosyl-tRNA synthetase [Neorickettsia risticii str. Illinois]
 gi|254589972|gb|ACT69334.1| tyrosyl-tRNA synthetase [Neorickettsia risticii str. Illinois]
          Length = 391

 Score =  345 bits (885), Expect = 8e-93,   Method: Compositional matrix adjust.
 Identities = 171/393 (43%), Positives = 261/393 (66%), Gaps = 13/393 (3%)

Query: 9   LSILSERGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           L I+ ERG+  Q ++   L+     G  +  Y+G+D TAS++H GHL  LML+  ++  G
Sbjct: 2   LKIIEERGYFLQCTDREALERRLHSGEKLVFYLGFDCTASAIHLGHLVPLMLMRLVKSYG 61

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+ I L+GGGT++IGDPS +D+SR+++  +EI +NI    G  S  +K   G  +   +N
Sbjct: 62  HEVIILLGGGTTLIGDPSGKDKSRKILSREEINKNI----GTISKIVKRIIG--NVRFVN 115

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  I+YID LR +G  FS+NRML+F+SV+SRL RE  LSFLEFNYMILQAYDFVEL
Sbjct: 116 NADWLEDIRYIDFLRNVGRHFSINRMLTFDSVKSRLDRESHLSFLEFNYMILQAYDFVEL 175

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            + Y+C +Q+GG DQWGNI+ G++LG +L+  ++F LT PL+TTASG KMGKT +GA+WL
Sbjct: 176 NRLYNCNVQIGGGDQWGNIVNGVELGRKLRNTQMFGLTVPLITTASGKKMGKTEAGAVWL 235

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           + ++ SP+++WQY+RN +D+DV  F +  T LP+ +I  ++     +INE+KK++ATE T
Sbjct: 236 DADLYSPHDYWQYFRNTEDSDVERFLRLFTELPIDKIKTLSACDDAQINESKKVLATEAT 295

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
            + HG   AE+ + + ++ F+ +  SQ +P I+I      RG  ++ ++++   A+S  +
Sbjct: 296 RICHGNAIAEEVSASIIKAFEENDPSQ-LPEIAI-----PRGSDIIDVVIRIEAASSRTQ 349

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG 400
           A+R ++S A+KI+   I    + +  Q   S G
Sbjct: 350 AKRLIESGAVKIDKKKILTHSIDLPEQFVVSVG 382


>gi|167768079|ref|ZP_02440132.1| hypothetical protein CLOSS21_02624 [Clostridium sp. SS2/1]
 gi|167710408|gb|EDS20987.1| hypothetical protein CLOSS21_02624 [Clostridium sp. SS2/1]
 gi|291561074|emb|CBL39874.1| tyrosyl-tRNA synthetase [butyrate-producing bacterium SSC/2]
          Length = 409

 Score =  345 bits (885), Expect = 8e-93,   Method: Compositional matrix adjust.
 Identities = 174/400 (43%), Positives = 253/400 (63%), Gaps = 5/400 (1%)

Query: 10  SILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
            +L ERGFI Q ++  EL  L  +  VT YIG+D TA SL AGH   +M +  +QK GH+
Sbjct: 7   DVLQERGFIAQTTH-EELRELLGKEKVTFYIGFDATADSLTAGHFLTIMAMMHMQKAGHR 65

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
           PI+L+GGGT++IGDPS + + R M+  + I  N ++ K   S FI +   K  A++ NN 
Sbjct: 66  PIALLGGGTTMIGDPSGKSDMRNMLTKETIDHNAKRFKEQLSRFITFDDDK--AILANNA 123

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
            WL ++ Y++ LRE+G  FSVN+ML+ E  + R++R   L+F EFNYM++Q YDF+EL +
Sbjct: 124 DWLLNLNYVEFLREVGVHFSVNKMLTAECYKQRMER--GLTFFEFNYMLMQGYDFLELNR 181

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
            Y C+L+MGG+DQW NI+ G DL  R +    + LT  LLT + G KMGKT++GA+WL+ 
Sbjct: 182 RYGCKLEMGGNDQWSNILAGADLIRRKEKKDAYGLTLTLLTRSDGVKMGKTMAGAVWLDP 241

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTM 309
           E TSPY+F+QYWRNI+D  V      LT LPM E+ R+  L+G EIN+AK+++A E+T +
Sbjct: 242 EKTSPYDFYQYWRNIEDVKVEECLSLLTFLPMDEVRRLGALEGAEINKAKEVLAYEVTKI 301

Query: 310 VHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEAR 369
           VHG EEA+KA TAA   F     ++  PT     D+++ G+ +LT++V +   T+ ++AR
Sbjct: 302 VHGEEEAKKAQTAAKAMFVSGGANEDAPTFEYEADKLAEGIDILTMLVDSKLCTTRSDAR 361

Query: 370 RHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
           R ++   + +N   +          DFD    I L  GKK
Sbjct: 362 RMVQQGGVSVNGKKVDAIDATFGKADFDDKDRILLKKGKK 401


>gi|317499370|ref|ZP_07957638.1| tyrosyl-tRNA synthetase [Lachnospiraceae bacterium 5_1_63FAA]
 gi|316893339|gb|EFV15553.1| tyrosyl-tRNA synthetase [Lachnospiraceae bacterium 5_1_63FAA]
          Length = 409

 Score =  345 bits (884), Expect = 9e-93,   Method: Compositional matrix adjust.
 Identities = 174/400 (43%), Positives = 253/400 (63%), Gaps = 5/400 (1%)

Query: 10  SILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
            +L ERGFI Q ++  EL  L  +  VT YIG+D TA SL AGH   +M +  +QK GH+
Sbjct: 7   DVLQERGFIAQTTH-EELRELLGKEKVTFYIGFDATADSLTAGHFLTIMAMMHMQKAGHR 65

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
           PI+L+GGGT++IGDPS + + R M+  + I  N ++ K   S FI +   K  A++ NN 
Sbjct: 66  PIALLGGGTTMIGDPSGKSDMRNMLTKETINHNAKRFKEQLSRFITFDDDK--AILANNA 123

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
            WL ++ Y++ LRE+G  FSVN+ML+ E  + R++R   L+F EFNYM++Q YDF+EL +
Sbjct: 124 DWLLNLNYVEFLREVGVHFSVNKMLTAECYKQRMER--GLTFFEFNYMLMQGYDFLELNR 181

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
            Y C+L+MGG+DQW NI+ G DL  R +    + LT  LLT + G KMGKT++GA+WL+ 
Sbjct: 182 RYGCKLEMGGNDQWSNILAGADLIRRKEKKDAYGLTLTLLTRSDGVKMGKTMAGAVWLDP 241

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTM 309
           E TSPY+F+QYWRNI+D  V      LT LPM E+ R+  L+G EIN+AK+++A E+T +
Sbjct: 242 EKTSPYDFYQYWRNIEDVKVEECLSLLTFLPMDEVRRLGALEGAEINKAKEVLAYEVTKI 301

Query: 310 VHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEAR 369
           VHG EEA+KA TAA   F     ++  PT     D+++ G+ +LT++V +   T+ ++AR
Sbjct: 302 VHGEEEAKKAQTAAKAMFVSGGANEDAPTFEYEADKLAEGIDILTMLVDSKLCTTRSDAR 361

Query: 370 RHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
           R ++   + +N   +          DFD    I L  GKK
Sbjct: 362 RMVQQGGVSVNGKKVDAIDATFGKADFDDKDRILLKKGKK 401


>gi|225570903|ref|ZP_03779926.1| hypothetical protein CLOHYLEM_07007 [Clostridium hylemonae DSM
           15053]
 gi|225160365|gb|EEG72984.1| hypothetical protein CLOHYLEM_07007 [Clostridium hylemonae DSM
           15053]
          Length = 407

 Score =  345 bits (884), Expect = 9e-93,   Method: Compositional matrix adjust.
 Identities = 180/400 (45%), Positives = 250/400 (62%), Gaps = 7/400 (1%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I Q+++  E+  L + G  T YIG+D TA SLH GH   L L+  LQ  G+KPI
Sbjct: 7   LQARGLIAQVTDEDEIRELINNGKATFYIGFDPTADSLHVGHFMALCLMKRLQDAGNKPI 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GGGT  IGDPS R + R MM  + IQ N +  K   S FI +  GK  ALM+NN  W
Sbjct: 67  ALIGGGTGYIGDPSGRTDMRSMMTPETIQHNCDCFKRQMSKFIDFSEGK--ALMVNNADW 124

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L  + YID+LREIG  FSVNRML+ E  + R+  E+ L+FLEFNYMI+Q++DF  L +NY
Sbjct: 125 LLDLNYIDMLREIGPHFSVNRMLAAECYKQRM--EKGLTFLEFNYMIMQSFDFYMLYQNY 182

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
            C +Q GG DQW N++ G +L  R       A+T  LL  + G KMGKT +GA+WL+ E 
Sbjct: 183 GCNMQFGGDDQWANMLGGTELIRRKLGKNACAMTITLLLNSEGKKMGKTQNGAVWLDPEK 242

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVH 311
           TSP++F+QYWRN+ D DV+   + LT LP+ EID+M   +G ++N AK+I+A E+T +VH
Sbjct: 243 TSPFDFYQYWRNVGDTDVLKCIRMLTFLPLEEIDKMDGWEGAQLNTAKEILAYELTKLVH 302

Query: 312 GREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTNEARR 370
           G EEA KA  +A   F     +Q MPT  I+ D++  G + +LTL++K+G   S +EARR
Sbjct: 303 GEEEARKAQESARALFSQGAAAQ-MPTAEITGDDLEDGRIDILTLLLKSGLVPSKSEARR 361

Query: 371 HLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            ++   + ++   +++ +       F   G I L  GKKN
Sbjct: 362 AVQQGGVAVDGEKVTDIQEIFPSDAFAGEGMI-LKKGKKN 400


>gi|302873572|ref|YP_003842205.1| tyrosyl-tRNA synthetase [Clostridium cellulovorans 743B]
 gi|307688247|ref|ZP_07630693.1| tyrosyl-tRNA synthetase [Clostridium cellulovorans 743B]
 gi|302576429|gb|ADL50441.1| tyrosyl-tRNA synthetase [Clostridium cellulovorans 743B]
          Length = 406

 Score =  345 bits (884), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 178/405 (43%), Positives = 262/405 (64%), Gaps = 7/405 (1%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           ++ L  L ERGFI Q ++  E   L  +  +T YIG+D TA SLH GH   +M +  +QK
Sbjct: 2   ANVLDTLLERGFIKQFTHEEETRELLEKEKITFYIGFDPTADSLHVGHFIAMMFMAHMQK 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+PI+L+GGGT+++GDPS + + R+M+  ++I+EN++ +K     FI +   K  A++
Sbjct: 62  AGHRPIALLGGGTAMVGDPSGKTDMRKMLTKEQIEENVKSLKSQMEKFIDFSDDK--AII 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  WL ++ Y+D LR+IG  FSVNRMLS E  + RL  E+ LSFLEFNYM++Q YDF 
Sbjct: 120 VNNADWLLNLNYVDFLRDIGVHFSVNRMLSAECFKQRL--EKGLSFLEFNYMLMQGYDFY 177

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L KNY C +++GG DQW N+I G++L  R +    +A+T  LLT + G KMGKT  GA+
Sbjct: 178 VLNKNYGCIMELGGDDQWSNMIAGVELIRRKEQKPAYAMTCTLLTNSEGKKMGKTEKGAL 237

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
           WL+   T+P++F+QYWRN+DDADV      LT LP+ E+  +  L+ KEINEAKK++A E
Sbjct: 238 WLDPNKTTPFDFYQYWRNVDDADVEKCLALLTFLPIDEVRALGALKDKEINEAKKVLAFE 297

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           IT +VHG+EEAEKA TAA   F   +   ++PT++I++D +  GM L+ ++       S 
Sbjct: 298 ITKLVHGQEEAEKAKTAAEALFGGGVDLSNVPTVTITRDNL--GMALVDILTITKIVPSK 355

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            E RR +    + IN+  I++  + I  ++F   G + +  GKKN
Sbjct: 356 GEGRRLITQGGVAINDEKITDFAIAIG-EEFFVDGYMMVKKGKKN 399


>gi|167759092|ref|ZP_02431219.1| hypothetical protein CLOSCI_01439 [Clostridium scindens ATCC 35704]
 gi|167663210|gb|EDS07340.1| hypothetical protein CLOSCI_01439 [Clostridium scindens ATCC 35704]
          Length = 407

 Score =  345 bits (884), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 180/400 (45%), Positives = 250/400 (62%), Gaps = 7/400 (1%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I Q+++  E+  L + G  T YIG+D TA SLH GH   L L+  LQ+ G+KPI
Sbjct: 7   LQARGLIAQVTDEDEIKELVNTGKATFYIGFDPTADSLHVGHFMALCLMKRLQEAGNKPI 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GGGT  IGDPS R + R MM  + IQ N +  K   S FI +  GK  ALM+NN  W
Sbjct: 67  ALIGGGTGYIGDPSGRSDMRSMMTPETIQHNCDCFKKQMSRFIDFSEGK--ALMVNNADW 124

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L  + YIDLLREIG  FSVNRML+ E  + R+  E+ LSFLEFNYMI+Q+YDF  L + Y
Sbjct: 125 LLDLNYIDLLREIGPHFSVNRMLTAECYKQRM--EKGLSFLEFNYMIMQSYDFYMLFQKY 182

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
            C LQ GG DQW N++ G +L  R       A+T  LL  + G KMGKT SGA+WL+   
Sbjct: 183 GCNLQFGGDDQWSNMLGGTELIRRKLGKNACAMTITLLLNSEGKKMGKTQSGAVWLDPNK 242

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVH 311
           TSP+ F+QYWRN+ DADV+   + LT LP+ EID+M   +G ++N AK+I+A E+T +VH
Sbjct: 243 TSPFEFYQYWRNVADADVLKCIRMLTFLPLEEIDKMDSWEGAQLNAAKEILAFELTKLVH 302

Query: 312 GREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTNEARR 370
           G EEA+K+  AA   F     +  MPT  +++++++ G + +L+++VK+G   S +EARR
Sbjct: 303 GEEEAQKSQEAARTLFSQGA-AADMPTTELNEEDLTDGNIDILSMLVKSGLVPSKSEARR 361

Query: 371 HLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            ++   + ++   + +       +D    G I L  GKKN
Sbjct: 362 AVQQGGVAVDGEKVEDIHATFAGEDMAGEG-IVLKKGKKN 400


>gi|163815452|ref|ZP_02206825.1| hypothetical protein COPEUT_01615 [Coprococcus eutactus ATCC 27759]
 gi|158449089|gb|EDP26084.1| hypothetical protein COPEUT_01615 [Coprococcus eutactus ATCC 27759]
          Length = 406

 Score =  344 bits (883), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 171/400 (42%), Positives = 253/400 (63%), Gaps = 7/400 (1%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I Q ++  E+  L + G    YIG+D TA SLH GH   L L+  LQ  G+KPI
Sbjct: 7   LVARGLIAQTTDEDEIRDLVNNGKAVFYIGFDPTADSLHVGHFMALCLMKRLQMAGNKPI 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GGGT++IGDPS R + R+MM  + IQ N++  K   S FI +   K  AL++NN  W
Sbjct: 67  ALIGGGTAMIGDPSGRTDMRQMMTKETIQHNVDCFKKQMSKFIDFSEDK--ALLVNNADW 124

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L  + Y+D+LR++G+ FSVN ML  E  + R+  E+ LSFLEFNYMI+Q+YDF  L + Y
Sbjct: 125 LLDLNYVDVLRDVGACFSVNNMLRAECYKQRM--EKGLSFLEFNYMIMQSYDFYALYQKY 182

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
            C +Q GG DQW N++ G +L  R      +A+T  LL  + G KMGKT  GA+WL+   
Sbjct: 183 GCNMQFGGDDQWSNMLGGTELIRRKLGKDAYAMTITLLLNSEGKKMGKTQKGAVWLDPNK 242

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVH 311
           TSP+ F+QYWRN+ DADV+   + LT LP+ EID+M   +G ++N+AK+I+A E+T +VH
Sbjct: 243 TSPFEFYQYWRNVADADVLKCIRMLTFLPLEEIDKMDNWEGSQLNQAKEILAYELTKLVH 302

Query: 312 GREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTNEARR 370
           G EEA KA  +A   F   + +  MP+++++ D+   G + +++++VK+G  TS NE RR
Sbjct: 303 GEEEAAKAQESARALFSKGV-AADMPSVTLAADDFKDGSIDIVSVLVKSGLVTSRNEGRR 361

Query: 371 HLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            ++   + ++   I++ +  I  + FD  G + +  GKKN
Sbjct: 362 AVEQGGVAVDGEKITDVQTTIPEEKFDGEG-VVVRRGKKN 400


>gi|302379435|ref|ZP_07267922.1| tyrosine--tRNA ligase [Finegoldia magna ACS-171-V-Col3]
 gi|302312780|gb|EFK94774.1| tyrosine--tRNA ligase [Finegoldia magna ACS-171-V-Col3]
          Length = 415

 Score =  344 bits (882), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 167/387 (43%), Positives = 248/387 (64%), Gaps = 4/387 (1%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG+  Q +   EL  L  +  V  YIG+D TA SL  GH  QLM++  +Q  GH PI
Sbjct: 15  LVARGYFEQATYEDELRDLLGKERVPFYIGFDATADSLTIGHFIQLMVMMRMQAHGHIPI 74

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+GGGT++IGDPS R++ R +M  + I +N  +     + FI +G  K  A + NN+ W
Sbjct: 75  CLLGGGTTMIGDPSGRNDMRSIMTKEVIDKNARRFYSQMTRFIDFGEDK--AYIENNKDW 132

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L ++ ++D +REIG  FSVN+ML+ ES ++R+K  Q L+F EF+YM++Q+YD++ L + Y
Sbjct: 133 LLNLNFLDFMREIGVHFSVNQMLTLESYKNRMK--QGLTFFEFSYMLMQSYDYLVLYRKY 190

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
            C+LQMGGSDQW NI+ G DL  +L+  K++A+T  LLTTA G KMGK+  GA+WL++  
Sbjct: 191 GCKLQMGGSDQWSNILGGYDLVRKLENDKVYAMTFKLLTTADGVKMGKSQKGAVWLDENK 250

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVH 311
           T+PY+ +QY RN+DD DV  F   LT LP  E  R+  L+G EIN+AK+++A E+  +VH
Sbjct: 251 TTPYDLFQYMRNVDDRDVEKFLLMLTFLPTDECKRLGSLEGSEINKAKEVLAFEVCKLVH 310

Query: 312 GREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRH 371
           G E+AE+A   A   F+ ++  ++MPT  +   +   G+GLL L+   G   S +EARR 
Sbjct: 311 GEEKAEEARQTANALFNSNVVDENMPTTEMKALDFENGIGLLNLLTMTGLTQSNSEARRL 370

Query: 372 LKSNAIKINNSIISNEKLQIKLQDFDS 398
           +  N I +N++  ++ K  I + DF+ 
Sbjct: 371 VTQNGISVNDNKEADPKRVITIHDFND 397


>gi|153855375|ref|ZP_01996524.1| hypothetical protein DORLON_02538 [Dorea longicatena DSM 13814]
 gi|149752195|gb|EDM62126.1| hypothetical protein DORLON_02538 [Dorea longicatena DSM 13814]
          Length = 407

 Score =  344 bits (882), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 177/400 (44%), Positives = 254/400 (63%), Gaps = 7/400 (1%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I Q+++   +  L + G  T YIG+D TA SLH GH   L L+  LQ+ G+KPI
Sbjct: 7   LVARGLIAQVTDEDRIKDLVNNGKATFYIGFDPTADSLHVGHFMALCLMKRLQEAGNKPI 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GGGT++IGDPS R + R+MM  + IQ N +  K   S FI +  GK  ALM+NN  W
Sbjct: 67  ALIGGGTAMIGDPSGRTDMRQMMTPETIQHNCDCFKKQMSRFIDFSDGK--ALMVNNADW 124

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L  + YI++LRE+G+ FSVNRML+ E  + R+  E+ LSFLEFNYMI+QAYDF EL + Y
Sbjct: 125 LMGLNYIEVLREVGAHFSVNRMLTAECYKQRM--EKGLSFLEFNYMIMQAYDFYELYQKY 182

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
            C L+ GG DQW N++ G +L  R       A+T  LL  + G KMGKT SGA+WL+   
Sbjct: 183 GCNLEFGGDDQWSNMLAGTELIRRKLGKDASAMTITLLLNSEGKKMGKTQSGAVWLDPNK 242

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVH 311
           TSP+ F+QYWRN+ DADV+   + LT LP+ EID+M   +G ++N AK+I+A E+T +VH
Sbjct: 243 TSPFEFYQYWRNVADADVLKCIRMLTFLPLEEIDKMDSWEGAQLNTAKEILAFELTKLVH 302

Query: 312 GREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTNEARR 370
           G EEA+KA  AA   F     +  MP   +++++++ G + +LT++VK+G   S +EARR
Sbjct: 303 GEEEAQKAQEAARALFSTGA-AADMPKTELTEEDLTDGNIDILTMLVKSGLTASKSEARR 361

Query: 371 HLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            ++   + ++   +++   Q    +  S   + L  GKKN
Sbjct: 362 AVQQGGVSVDGEKVTD-VFQTFAGEALSGEGVVLKKGKKN 400


>gi|300814031|ref|ZP_07094321.1| tyrosine--tRNA ligase [Peptoniphilus sp. oral taxon 836 str. F0141]
 gi|300511855|gb|EFK39065.1| tyrosine--tRNA ligase [Peptoniphilus sp. oral taxon 836 str. F0141]
          Length = 409

 Score =  344 bits (882), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 170/401 (42%), Positives = 258/401 (64%), Gaps = 5/401 (1%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
             +L ERGFI  +++   L  +  +  +  YIG+D TA SL  GH  Q+ ++  +QK GH
Sbjct: 6   FDVLKERGFIDSVTDEENLKDVLEKEKIKFYIGFDATADSLTLGHFLQIRVMQHMQKQGH 65

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
            P++L+GGGT+ IGDPS +++ R++M  Q I  N +  K   S F+ +  GK   ++LNN
Sbjct: 66  IPVALLGGGTTSIGDPSGKNDMRKLMDRQTIDHNAKCFKEQISRFVDFSDGK--GMILNN 123

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL ++ +++ +R IG  FSVNRML+F+  ++R+  E+ L+F EF+YM++Q+YDF+ L 
Sbjct: 124 GDWLLNLNFLEFMRTIGVHFSVNRMLTFDCYKNRM--EKGLTFFEFSYMLMQSYDFLHLY 181

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
           +NY  +L++GGSDQW NII G +L  +L+  K+F +T  LL TA+G KMGKT  GAIWL+
Sbjct: 182 RNYGVKLELGGSDQWSNIIGGYELVRKLEEEKVFGMTFKLLITANGVKMGKTEKGAIWLS 241

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITT 308
           KE TSPY  +QY RN DD DV+ F K LT L M EI    KL+G+E+N+AK+++A E+  
Sbjct: 242 KEKTSPYEMFQYLRNTDDRDVIKFLKLLTLLDMDEIKEYEKLEGQELNKAKEVLAYEVVK 301

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
            VHG EEA+KA  A+   F     ++++P+  ++K+ +  G+G+L ++ + GF+ + +EA
Sbjct: 302 DVHGEEEAKKALEASKAMFGGQKTAENIPSTLMNKESLQEGIGILNILTEIGFSKTNSEA 361

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
           RR +    I IN+  I++  L I L  F     I L  GKK
Sbjct: 362 RRLINQGGISINDEKITDPALIITLDKFKDD-EIILRKGKK 401


>gi|255284138|ref|ZP_05348693.1| tyrosine--tRNA ligase [Bryantella formatexigens DSM 14469]
 gi|255265312|gb|EET58517.1| tyrosine--tRNA ligase [Bryantella formatexigens DSM 14469]
          Length = 408

 Score =  343 bits (881), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 178/400 (44%), Positives = 255/400 (63%), Gaps = 4/400 (1%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I Q++N  E+  + ++G  T YIG+D TA SLH GH   L L+  LQ  G++PI
Sbjct: 7   LVARGLIAQVTNEEEIRKMVNEGKATFYIGFDPTADSLHVGHFMALCLMKRLQMAGNRPI 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GGGT ++GDPS R + R+MM ++ I  NIE  K   S FI++G GK  ALM+NN  W
Sbjct: 67  ALLGGGTGMVGDPSGRTDMRQMMTTETINHNIECFKKQMSRFIEFGEGK--ALMVNNADW 124

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L ++ YI+ LRE+G  FSVN ML  E  + R+  E+ LSFLEFNYMI+Q+YDF+EL + Y
Sbjct: 125 LTNLNYIEFLREVGPHFSVNNMLRAECYKQRM--EKGLSFLEFNYMIMQSYDFLELYQRY 182

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
            C +Q GG DQW N++ G +L  R       A+T  LL  + G KMGKT SGA+WL+   
Sbjct: 183 GCNMQFGGDDQWSNMLGGTELIRRKLGKDAHAMTITLLLNSEGKKMGKTQSGAVWLDPNK 242

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVH 311
           TSPY F+QYWRN+ DADV+   + LT LP+ EID M K +G ++N+AK+I+A E+T +VH
Sbjct: 243 TSPYEFYQYWRNVADADVLKCIRMLTFLPLEEIDEMDKWEGSQLNKAKEILAFELTKLVH 302

Query: 312 GREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRH 371
           G +EA+KA  AA   F     S+++PT    + E+  G  +L+L+V+   + S +EARR 
Sbjct: 303 GEDEAKKADEAAKALFAGGGKSENVPTTVYPQAELDAGKDILSLLVETKLSASRSEARRL 362

Query: 372 LKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           ++   + +N+  ++         DFD+ G + +  GKK +
Sbjct: 363 VQQGGVTVNDKKVTAIDRVFTTADFDADGVLLIKKGKKGY 402


>gi|300856964|ref|YP_003781948.1| tyrosyl-tRNA synthetase [Clostridium ljungdahlii DSM 13528]
 gi|300437079|gb|ADK16846.1| tyrosyl-tRNA synthetase [Clostridium ljungdahlii DSM 13528]
          Length = 406

 Score =  343 bits (881), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 180/402 (44%), Positives = 258/402 (64%), Gaps = 7/402 (1%)

Query: 10  SILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
            IL ERG+I Q ++  E+  L  +  VT YIG+D TA SLH GH  Q+M++ ++Q+ GH+
Sbjct: 6   DILLERGYIKQSTHEEEIRELLGKEKVTFYIGFDPTADSLHVGHFLQMMVMHYMQEAGHR 65

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
           PI+L+GGGT+++GDP+ + + R+M+  ++IQ N E  K  FS  + +   K  A++ NN 
Sbjct: 66  PIALLGGGTTMVGDPTGKTDMRKMLSKEQIQHNAECFKKQFSRLVDFKDDK--AILANNA 123

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
            WL ++ YI+ LR+IG  FSVN+ML+ E  + RL+R   LSFLEFNYM++Q YDF+EL +
Sbjct: 124 DWLLNLNYIEFLRDIGVHFSVNKMLTAECFKQRLER--GLSFLEFNYMLMQGYDFLELNR 181

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
            Y C L++GG DQW NII G++L  + +    F +T  LLT + G KMGKT  GAIWL+ 
Sbjct: 182 RYGCVLELGGDDQWSNIIAGVELIRKKEQKPAFGMTFTLLTKSDGKKMGKTEGGAIWLDP 241

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTM 309
           E TSPY F+QYWRNI DADV      LT LPM E+ R+  L G+EINEAKK++A E+T +
Sbjct: 242 EKTSPYEFYQYWRNIGDADVEKCLALLTFLPMDEVKRLGSLPGEEINEAKKVLAYEVTKI 301

Query: 310 VHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEAR 369
           VHG +EAEKA  AA   F    + +++PT+ I   E S G  ++ L+       S +E R
Sbjct: 302 VHGLKEAEKAKEAAEALFSGGQNMENVPTVEIG--ENSLGCSIVELLADLQILPSKSEVR 359

Query: 370 RHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           R ++ N + +N+  I++ KL I    F   G + +  GKK +
Sbjct: 360 RLIQQNGLTVNDEKITDPKLLITKDSF-KDGEMLIRRGKKKY 400


>gi|220929497|ref|YP_002506406.1| tyrosyl-tRNA synthetase [Clostridium cellulolyticum H10]
 gi|219999825|gb|ACL76426.1| tyrosyl-tRNA synthetase [Clostridium cellulolyticum H10]
          Length = 408

 Score =  343 bits (880), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 174/407 (42%), Positives = 259/407 (63%), Gaps = 5/407 (1%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S    +L ERGFI QI++  E+  L  +  VT YIG+D TA SLH GH  QLM++  +Q+
Sbjct: 2   SSVFDVLKERGFIAQITHEDEVKKLLGEKKVTFYIGFDPTADSLHIGHFLQLMVMAHMQQ 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH PI L+GGGT+++GDPS +++ R+MM  + I+ N +  K   S FI +   K  A M
Sbjct: 62  AGHIPIVLIGGGTAMVGDPSGKNDMRKMMTREIIKHNADSFKTQISKFIDFSDNK--AFM 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           ++N  WL  + Y+  LR++G  FSVNRML+ E  ++R+  E+ L+FLEFNYM++Q+YDF+
Sbjct: 120 VDNSEWLMELNYVQFLRDVGVHFSVNRMLTAECFKTRM--EKGLTFLEFNYMLMQSYDFL 177

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L + YDC+L++GG DQW NI+ GI+L  + +  +++ +T  LLTT+ G KMGKT +GA+
Sbjct: 178 VLNRKYDCQLELGGDDQWSNILGGINLVRKSEAKEVYGMTFKLLTTSEGKKMGKTENGAV 237

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
           WL+ E T+PY F+QYWRNIDD DV +    +T LPM E+ R+  L+   INEAK ++A E
Sbjct: 238 WLDPEKTTPYEFYQYWRNIDDNDVENCLALMTFLPMDEVRRLGSLKDAGINEAKAVLAYE 297

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           +T +VHG +EA KA  AA   F     S  +P I I+  ++  G+ +  L++ AG   S 
Sbjct: 298 VTKIVHGEDEAGKAKEAAEAIFGGKGKSDSIPFIEINSADLEAGIKIADLLMAAGLTPSK 357

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           +EARR ++   + +N++ I+     +   D    G + L  GKKN +
Sbjct: 358 SEARRAIQQGGVLLNDNKITGFDYTVGTNDL-VNGEMMLQKGKKNFV 403


>gi|187776757|ref|ZP_02993230.1| hypothetical protein CLOSPO_00272 [Clostridium sporogenes ATCC
           15579]
 gi|187775416|gb|EDU39218.1| hypothetical protein CLOSPO_00272 [Clostridium sporogenes ATCC
           15579]
          Length = 407

 Score =  343 bits (880), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 181/406 (44%), Positives = 263/406 (64%), Gaps = 8/406 (1%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+   IL ERG+I Q+++  E+  L  +  ++ YIG+D TA SLH GH  Q+M++  +QK
Sbjct: 2   SNVYDILKERGYIKQLTHEEEIRELLGKEKISFYIGFDPTADSLHVGHFLQMMVMAHMQK 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+PI+L+GGGT +IGDP+ + + R+MM   +I+ N    K   +  I +   K  A+M
Sbjct: 62  AGHRPIALVGGGTGMIGDPTGKTDMRKMMTKDQIEHNCNCFKKQLAKIIDFSDDK--AIM 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  WL ++ YI+ LREIG  FSVN+ML+ E  +SRL  E+ LSFLEFNYM++Q YDF+
Sbjct: 120 VNNADWLLNLNYIEFLREIGVHFSVNKMLTAECFKSRL--EKGLSFLEFNYMLMQGYDFL 177

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           EL + Y+C +++GG DQW NI+ G+DL  R ++   + +T  LLT + G KMGKT SGA+
Sbjct: 178 ELNRKYNCVMELGGDDQWSNILAGVDLIRRKESKSAYGMTFTLLTNSEGKKMGKTESGAL 237

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
           WL+ E TSPY F+QYWRN+ DADV    + +T LPM E+ R++ L+G EINEAKK++A E
Sbjct: 238 WLDPEKTSPYEFYQYWRNVADADVEKCLRLITFLPMDEVRRLSSLEGAEINEAKKVLAFE 297

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHS-QHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           +T ++HG EEAEKA  AA   F  +     +MPT  I KD ++    L+ L+VK     S
Sbjct: 298 VTKLIHGEEEAEKAKVAAEALFGGNAKDLGNMPTAYIGKDHLNN--PLVDLLVKCEIFPS 355

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            +EARR +K   + +N+  +++  L +  +     G I +  GKKN
Sbjct: 356 KSEARRLIKQGGLYVNDEKVTDINLVVTEEHVTEDG-IMIRRGKKN 400


>gi|158520626|ref|YP_001528496.1| tyrosyl-tRNA synthetase [Desulfococcus oleovorans Hxd3]
 gi|254783594|sp|A8ZUK6|SYY_DESOH RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|158509452|gb|ABW66419.1| tyrosyl-tRNA synthetase [Desulfococcus oleovorans Hxd3]
          Length = 433

 Score =  343 bits (879), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 182/424 (42%), Positives = 263/424 (62%), Gaps = 24/424 (5%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           + ILSERGF+   ++ +EL  L ++  VT YIG+D TASSLH G L  +M L  +Q+ GH
Sbjct: 4   VDILSERGFVEAFTHEQELRDLAAESAVTCYIGFDPTASSLHVGSLVPIMALAHMQRNGH 63

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           +PI+L+GGGT ++GDPS + E R+++  + ++ NIE I+   S FI +  GK  AL++NN
Sbjct: 64  RPIALVGGGTGLVGDPSGKTEMRQLITPETVEANIEGIQRQLSRFIDFDGGK--ALLVNN 121

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL  ++YI  LR+IG  FSVNRM+  ES R RL+ E+ LSF+EFNYM+LQAYDF++L 
Sbjct: 122 ADWLTGLEYIPFLRDIGRHFSVNRMIKAESYRMRLESEEGLSFIEFNYMLLQAYDFLKLC 181

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
            + DC LQMGGSDQWGNI+ GIDL  R+   +++ LT PL+TT+SG KMGKT +GA+WL+
Sbjct: 182 GDRDCVLQMGGSDQWGNIVAGIDLVRRVLNRQVYGLTFPLITTSSGAKMGKTAAGAVWLD 241

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITT 308
            E TSPY+++QYW N DD DV  F    T LPM EI  + ++ G ++N AK ++A E T 
Sbjct: 242 AERTSPYDYYQYWINTDDQDVARFLSLFTFLPMPEIQEVKRISGADLNSAKAVLAFEATR 301

Query: 309 MVHGREEAEKA-ATAAMECFDMSIHSQHMPTISISKD--------------------EVS 347
           + HG + A +A + AA+      I    +P+ +I +D                    E+S
Sbjct: 302 IAHGTDAAVQAHSDAAVNFGRRDIPQDLLPSSTIPRDAEGTGAAVSGTAPQTEMTMAELS 361

Query: 348 RGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFG 407
            G+    L    G A S  +ARR ++     +N+  I +++ ++  +D D    I L  G
Sbjct: 362 EGIPAFVLFHTVGLADSKGQARRLIQQGGGYVNDRRIESDEYRVSAEDLDDA-KIVLRAG 420

Query: 408 KKNH 411
           KK +
Sbjct: 421 KKRY 424


>gi|325679290|ref|ZP_08158875.1| tyrosine--tRNA ligase [Ruminococcus albus 8]
 gi|324108887|gb|EGC03118.1| tyrosine--tRNA ligase [Ruminococcus albus 8]
          Length = 406

 Score =  343 bits (879), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 176/387 (45%), Positives = 254/387 (65%), Gaps = 7/387 (1%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I Q+++ +E+  + + G    YIG+D TA SLH GH   L L+  LQ  G+KPI
Sbjct: 7   LVRRGLIAQVTDEKEISNMINNGKAVFYIGFDPTADSLHVGHFMALCLMKRLQMAGNKPI 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GGGT +IGDPS + + R+M+  + IQ N E  K   S FI +  GK  ALM+NN  W
Sbjct: 67  ALVGGGTGMIGDPSGKSDMRKMLTPETIQHNCECFKKQMSRFIDFSDGK--ALMVNNGDW 124

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L ++ YID+LRE+G+ FSVN+ML+FE  + R++R   L+FLEFNYMI+Q+YDF  L ++Y
Sbjct: 125 LLNLNYIDVLREVGACFSVNKMLTFECYKQRMER--GLTFLEFNYMIMQSYDFYRLFQDY 182

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
            C +Q GG DQW N++ G +L  +       A+T  LL  + G KMGKT  GA+WL+ E 
Sbjct: 183 GCNMQFGGDDQWANMLGGTELIRKKLGKDAHAMTITLLLNSEGKKMGKTEKGAVWLDAEK 242

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK-LQGKEINEAKKIIATEITTMV 310
           TSPY+F+QYWRN+DDADV+   K LT +P+ EI+ M + ++G E N+AK+++A E+T ++
Sbjct: 243 TSPYDFYQYWRNVDDADVIKCLKLLTFVPIEEIEEMEQHMEGAEYNKAKELLAFELTKLI 302

Query: 311 HGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG--MGLLTLIVKAGFATSTNEA 368
           HG EEA+KA  AA   F     S  MPT +++KD+V     +G+L L+VKAG A S +EA
Sbjct: 303 HGEEEAKKADAAAKAIFGGGADSADMPTTTLTKDDVDENNCIGILNLLVKAGLAPSNSEA 362

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQD 395
           RR ++ N I +N    ++ K  + + +
Sbjct: 363 RRLVQQNGIAVNGEKFTDPKGMVDISE 389


>gi|225018356|ref|ZP_03707548.1| hypothetical protein CLOSTMETH_02300 [Clostridium methylpentosum
           DSM 5476]
 gi|224948873|gb|EEG30082.1| hypothetical protein CLOSTMETH_02300 [Clostridium methylpentosum
           DSM 5476]
          Length = 407

 Score =  343 bits (879), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 169/399 (42%), Positives = 259/399 (64%), Gaps = 6/399 (1%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I Q+++  ++        VT YIG+D TA SLH GH  QL+++  LQ  GHKP+
Sbjct: 7   LKRRGLIAQMTHEDKIKEALENEQVTFYIGFDATADSLHVGHFLQLVVMRHLQLAGHKPV 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+G GT+++GDP+ R + R+M+  +EI  N E  K   S FI +   K  AL++ N  W
Sbjct: 67  ALLGTGTTMVGDPTGRTDMRQMLTPEEINHNAECFKKQMSKFIDFSDDK--ALIVKNGDW 124

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L ++ YID LR++G +FSVN+ML+ ESV++RL+R   LSFLEFNYM++Q+YDF+ L +  
Sbjct: 125 LLNLNYIDFLRDVGRYFSVNQMLTAESVKNRLER--GLSFLEFNYMLMQSYDFLHLYQTM 182

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
            C +++GG DQW NI+ GIDL  R++  +++ +T  LLTT  G KMGKT  GA+WL++  
Sbjct: 183 GCTMELGGDDQWSNILKGIDLVRRVEGEEVYGMTFTLLTTKEGKKMGKTAKGALWLDENK 242

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVH 311
            SPY+F+QYWRN+ D DV++  K +T LP+ EI+ M   +G ++N+AK+I+A E+T MVH
Sbjct: 243 CSPYDFFQYWRNVSDDDVINCLKLITFLPIEEIEAMESWEGSQLNKAKEILAFEVTKMVH 302

Query: 312 GREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTNEARR 370
           G E+A +A  AA   F  +    +MPT  ++  + + G +GLL L+VK     S  EARR
Sbjct: 303 GEEKATEALGAARALFTANSDDANMPTTQLADSDFNDGQIGLLDLMVKTKLCPSKGEARR 362

Query: 371 HLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
            ++   + +++  +++    +  QDF+  G++ +  GKK
Sbjct: 363 LVQQGGVSVDDVKVTDPAKVLTAQDFEK-GHVIIKKGKK 400


>gi|295093737|emb|CBK82828.1| tyrosyl-tRNA synthetase [Coprococcus sp. ART55/1]
          Length = 406

 Score =  343 bits (879), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 171/400 (42%), Positives = 253/400 (63%), Gaps = 7/400 (1%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I Q ++  E+  L + G    YIG+D TA SLH GH   L L+  LQ  G+KPI
Sbjct: 7   LVARGLIAQTTDEDEIRDLVNNGKAVFYIGFDPTADSLHVGHFMALCLMKRLQMAGNKPI 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GGGT++IGDPS R + R+MM  + IQ N++  K   S FI +   K  AL++NN  W
Sbjct: 67  ALIGGGTAMIGDPSGRTDMRQMMTKETIQHNVDCFKKQMSKFIDFSEDK--ALLVNNADW 124

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L  + Y+D+LR++G+ FSVN ML  E  + R+  E+ LSFLEFNYMI+Q+YDF  L + Y
Sbjct: 125 LLDLNYVDVLRDVGACFSVNNMLRAECYKQRM--EKGLSFLEFNYMIMQSYDFYVLYQKY 182

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
            C +Q GG DQW N++ G +L  R      +A+T  LL  + G KMGKT  GA+WL+   
Sbjct: 183 GCNMQFGGDDQWSNMLGGTELIRRKLGKDAYAMTITLLLNSEGKKMGKTQKGAVWLDPNK 242

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVH 311
           TSP+ F+QYWRN+ DADV+   + LT LP+ EID+M   +G ++N+AK+I+A E+T +VH
Sbjct: 243 TSPFEFYQYWRNVADADVLKCIRMLTFLPLEEIDKMDSWEGSQLNQAKEILAYELTKLVH 302

Query: 312 GREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTNEARR 370
           G EEA KA  +A   F   + +  MP+++++ D+   G + +++++VK+G  TS NE RR
Sbjct: 303 GEEEAAKAQESARALFSKGVAA-DMPSVTLAADDFKDGAIDIVSVLVKSGLVTSRNEGRR 361

Query: 371 HLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            ++   + ++   I++ +  I  + FD  G + +  GKKN
Sbjct: 362 AVEQGGVAVDGEKITDVQTTILQEKFDGEG-VVVRRGKKN 400


>gi|268610300|ref|ZP_06144027.1| tyrosyl-tRNA synthetase [Ruminococcus flavefaciens FD-1]
          Length = 405

 Score =  342 bits (878), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 180/385 (46%), Positives = 258/385 (67%), Gaps = 6/385 (1%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG + Q+++ +E++ L + G  T YIG+D TA SLH GH   L L+  LQ  G+KPI
Sbjct: 7   LKRRGLLAQLTDEKEIEELVNAGKATFYIGFDPTADSLHVGHFMALCLMKRLQMAGNKPI 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+GGGT++IGDPS + + R+MM ++ IQ N++  K   S FI +   K  A+++NN  W
Sbjct: 67  VLIGGGTAMIGDPSGKTDMRKMMTAETIQHNVDCFKKQMSRFIDFSEDK--AIIVNNADW 124

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L  + YI+LLR++G+ FSVNRMLS E  + R++R   L+FLEFNYMI+Q+YDF+EL + Y
Sbjct: 125 LMKLNYIELLRDVGAHFSVNRMLSHECYKQRMER--GLTFLEFNYMIMQSYDFLELFQKY 182

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
            C +Q GG DQW N++ G +L  R      +A+T  LL  + G KMGKT  GA+WL+ E 
Sbjct: 183 GCNMQFGGDDQWANMLGGTELIRRKLGKDAYAMTITLLLNSEGKKMGKTEKGAVWLDPEK 242

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK-LQGKEINEAKKIIATEITTMV 310
           T+PY F+QYWRN+ DADV+   K LT +P+ +I+ M K ++G E N+AK+++A E+T +V
Sbjct: 243 TTPYEFFQYWRNVADADVIKCLKMLTFVPVEQIEEMEKTMEGAEYNKAKELLAYELTKLV 302

Query: 311 HGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTNEAR 369
           HG EEAEKA  AA   F  S  +++MPT+ I   E++ G +GLLTL+VKA  A S +EAR
Sbjct: 303 HGEEEAEKAKAAAKALFGGSGSNENMPTVEIDSAELTDGALGLLTLLVKAELAPSISEAR 362

Query: 370 RHLKSNAIKINNSIISNEKLQIKLQ 394
           R ++   I +N+    + K QIKL+
Sbjct: 363 RLVQQGGITVNDEKKIDPKEQIKLE 387


>gi|153816262|ref|ZP_01968930.1| hypothetical protein RUMTOR_02511 [Ruminococcus torques ATCC 27756]
 gi|317501761|ref|ZP_07959947.1| tyrosine-tRNA ligase [Lachnospiraceae bacterium 8_1_57FAA]
 gi|331088718|ref|ZP_08337628.1| tyrosyl-tRNA synthetase [Lachnospiraceae bacterium 3_1_46FAA]
 gi|145846445|gb|EDK23363.1| hypothetical protein RUMTOR_02511 [Ruminococcus torques ATCC 27756]
 gi|316896794|gb|EFV18879.1| tyrosine-tRNA ligase [Lachnospiraceae bacterium 8_1_57FAA]
 gi|330407241|gb|EGG86744.1| tyrosyl-tRNA synthetase [Lachnospiraceae bacterium 3_1_46FAA]
          Length = 407

 Score =  342 bits (878), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 176/400 (44%), Positives = 252/400 (63%), Gaps = 7/400 (1%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I Q+++   +  L + G    YIG+D TA SLH GH   L L+  LQ+ G+KPI
Sbjct: 7   LQARGLIAQVTDEERIRDLVNSGKAVFYIGFDPTADSLHVGHFMALCLMKRLQEAGNKPI 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GGGT  IGDPS R + R MM  ++I  N +  K   S FI +  GK  ALM+NN  W
Sbjct: 67  ALIGGGTGYIGDPSGRTDMRSMMTPEQICHNCDCFKEQMSKFIDFSEGK--ALMVNNADW 124

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L  + Y+++LREIG  FSVNRML+ E  + R+  E+ LSFLEFNYMI+QAYDF  L + Y
Sbjct: 125 LLDLNYVEVLREIGPHFSVNRMLTAECYKQRM--EKGLSFLEFNYMIMQAYDFYALFQKY 182

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
            C +Q GG DQW N++ G +L  R       A+T  LL  + G KMGKT SGA+WL+   
Sbjct: 183 GCNMQFGGDDQWSNMLAGTELIRRKLGEDAGAMTITLLLNSEGKKMGKTQSGAVWLDPNK 242

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVH 311
           TSP++F+QYWRN+ DADV+   + LT LP+ EID+M   +G ++N AK+I+A E+T +VH
Sbjct: 243 TSPFDFYQYWRNVADADVLKCIRMLTFLPLEEIDKMDSWEGAQLNTAKEILAYELTKLVH 302

Query: 312 GREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTNEARR 370
           G EEA+KA  +A   F    ++  MPT  +++++++ G + +LT++VK+G  TS +EARR
Sbjct: 303 GEEEAKKAQESARALFSKG-NAAEMPTAQLTEEDLTDGKIDILTMLVKSGLVTSKSEARR 361

Query: 371 HLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            ++   + ++   +S+       ++    G I L  GKKN
Sbjct: 362 AVQQGGVAVDGEKVSDIAASFGKEELSGEG-IILKKGKKN 400


>gi|291520806|emb|CBK79099.1| tyrosyl-tRNA synthetase [Coprococcus catus GD/7]
          Length = 407

 Score =  342 bits (878), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 171/385 (44%), Positives = 250/385 (64%), Gaps = 6/385 (1%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I Q+++  E+  L + G  T YIG+D TA SLH GH   L L+  LQ  G++PI
Sbjct: 7   LVARGLIAQVTDEEEIKELINNGKATFYIGFDPTADSLHVGHFMALCLMKRLQMAGNRPI 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GGGT++IGDPS R + R+MM  + IQ N++  K   S FI +  GK  ALM+NN  W
Sbjct: 67  ALIGGGTAMIGDPSGRTDMRQMMTPETIQHNVDCFKKQMSRFIDFSDGK--ALMVNNADW 124

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L ++ YI+LLR++G+ FSVNRML+ E  + R++R   LSFLEFNYMI+Q+YDF EL + Y
Sbjct: 125 LMNLNYIELLRDVGAHFSVNRMLTAECYKQRMER--GLSFLEFNYMIMQSYDFYELFQRY 182

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
            C LQ GG DQW N++ G +L  R       A+T  LL  + G KMGKT SGA+WL+   
Sbjct: 183 GCNLQFGGDDQWSNMLGGTELIRRKLGKNASAMTITLLLNSEGKKMGKTQSGAVWLDPNK 242

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVH 311
           TSP++F+QYWRN+ DADV+   + LT LP+ +ID M K +G ++N+AK+I+A E+T +VH
Sbjct: 243 TSPFDFYQYWRNVGDADVLKCLRMLTFLPLEQIDEMDKWEGSQLNQAKEILAFELTKLVH 302

Query: 312 GREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTNEARR 370
           G EEA KA  +A   F     +  MPT ++++ ++  G + +L ++V AG   + +EARR
Sbjct: 303 GEEEATKAQESARALFSAG-SAADMPTTTLTEADLRDGSVDILGILVAAGLCPTRSEARR 361

Query: 371 HLKSNAIKINNSIISNEKLQIKLQD 395
           +++   + +N   +++ K     +D
Sbjct: 362 NVQQGGVTVNGEKVTDFKAAYTPED 386


>gi|150391338|ref|YP_001321387.1| tyrosyl-tRNA synthetase [Alkaliphilus metalliredigens QYMF]
 gi|149951200|gb|ABR49728.1| tyrosyl-tRNA synthetase [Alkaliphilus metalliredigens QYMF]
          Length = 409

 Score =  342 bits (878), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 183/404 (45%), Positives = 251/404 (62%), Gaps = 4/404 (0%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+   IL ERGFI Q ++  E+  L  +  +T Y+G+D TA SLH GH  QLM++  +QK
Sbjct: 2   SNVFDILKERGFIAQATHEDEIQQLLGKEPITFYVGFDPTADSLHVGHFLQLMVMSHMQK 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH PI L GGGT++IGDPS + + R+MM  + IQ N++        F+ +   K   + 
Sbjct: 62  AGHIPIFLAGGGTAMIGDPSGKTDMRKMMTPETIQHNVDCFMEQTKRFLDFSENK--GIT 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  WL S+ YI  +REIG  FSVNRML+ E  +SR+  E+ LSFLEFNYMI+Q+YDF+
Sbjct: 120 VNNADWLMSLNYIPFIREIGKHFSVNRMLTAECFKSRM--EKGLSFLEFNYMIMQSYDFL 177

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           EL + ++CRLQ+GG DQW NII G DL  R++    + +T  LLTT+ G KMGKT SGAI
Sbjct: 178 ELFRRHNCRLQLGGDDQWSNIIAGTDLIRRVEGESAYGMTFTLLTTSEGKKMGKTESGAI 237

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
           WL+   TSP++F+QYWRN+ DADV      LT L M EI+R+A L+G EIN+AK+ +A E
Sbjct: 238 WLDPNKTSPFDFYQYWRNVGDADVRKCLCLLTFLSMEEINRLATLEGSEINQAKETLAFE 297

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           +T++VHG EEA +A  AA   F         P+  + K E   G+ +LTL+ K   A+S 
Sbjct: 298 VTSLVHGEEEARRAQEAARALFSKGALGGSFPSTELPKSEFIDGIDVLTLLTKLQLASSR 357

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
            E RR ++   I IN+  I   +  I    F     + +  GKK
Sbjct: 358 GEGRRLVQQGGISINDEKIVEIEAVINQSSFLEDDTLMIKKGKK 401


>gi|254302471|ref|ZP_04969829.1| tyrosine--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum
           ATCC 10953]
 gi|148322663|gb|EDK87913.1| tyrosine--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum
           ATCC 10953]
          Length = 402

 Score =  342 bits (877), Expect = 7e-92,   Method: Compositional matrix adjust.
 Identities = 166/386 (43%), Positives = 243/386 (62%), Gaps = 6/386 (1%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           ++   +L ERG++ Q+++  E+  +  +  VT YIG+D TA SLH GH   +M +  +Q+
Sbjct: 2   ANVYDVLKERGYLKQLTHEEEIKEILGKEKVTFYIGFDPTADSLHVGHFIAMMFMAHMQQ 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+PI+L GGGT +IGDPS R + R MM  + I  N+E IK     FI +   K  A++
Sbjct: 62  HGHRPIALAGGGTGMIGDPSGRSDMRTMMTVEMIDHNVECIKKQMQKFIDFSDDK--AIL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
            NN  WL ++ YI+ LR++G +FSVNRML+ E  +SR+  E  LSFLEFNYMI+QAYDF 
Sbjct: 120 ANNADWLRNLNYIEFLRDVGEYFSVNRMLAAECYKSRM--ENGLSFLEFNYMIMQAYDFY 177

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L   Y+C +Q+GG DQW N+I G++L  R      +A+T  LLT + G KMGKT  GA+
Sbjct: 178 VLNHKYNCTMQLGGDDQWSNMIAGVELLRRKDRKPAYAMTCTLLTNSEGKKMGKTAKGAL 237

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
           WL+ + T+PY F+QYWRNIDD DV +    LT LPM E+ R+  L+  EINEAKK++A E
Sbjct: 238 WLDPKKTTPYEFYQYWRNIDDQDVENCLALLTFLPMDEVRRLGALKDAEINEAKKVLAYE 297

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           +T ++HG EEA KA  A    F    +  + P I ++ ++ S+   LL ++V+     + 
Sbjct: 298 VTKIIHGEEEATKAKEATEALFGNGNNLDNAPKIEVTDEDFSK--ELLDVLVERKILKTK 355

Query: 366 NEARRHLKSNAIKINNSIISNEKLQI 391
           +E RR ++ N + +N+  I + K  +
Sbjct: 356 SEGRRLIEQNGMSLNDEKIKDVKFTL 381


>gi|224370578|ref|YP_002604742.1| TyrS [Desulfobacterium autotrophicum HRM2]
 gi|223693295|gb|ACN16578.1| TyrS [Desulfobacterium autotrophicum HRM2]
          Length = 431

 Score =  342 bits (876), Expect = 8e-92,   Method: Compositional matrix adjust.
 Identities = 179/427 (41%), Positives = 257/427 (60%), Gaps = 23/427 (5%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           K   L IL++RGF+  +++  EL     +   T YIG+D T  SLH GHL  +M L  +Q
Sbjct: 3   KMSVLDILNQRGFVEAVTHEDELKEYLDKEGATCYIGFDPTGPSLHVGHLVTIMALAHMQ 62

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + GH+PI+L+GGGT +IGDPS + E R+++   ++ EN + I+   S F+ +  GK  A+
Sbjct: 63  RNGHRPIALVGGGTGLIGDPSGKTEMRKVITHDQVNENKQSIQKQLSRFLDFEDGK--AM 120

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           +L+N  WL  ++YI  LR+IG  FSVN+M+  ES R R++ ++ LSF+EFNYM+LQAYDF
Sbjct: 121 LLDNADWLTGLEYISFLRDIGRHFSVNKMIKAESYRVRIESDEGLSFIEFNYMLLQAYDF 180

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           ++L + +DCRLQMGGSDQWGNI+ GIDL  R ++   F +T PL+TT+SG KMGKT  GA
Sbjct: 181 MQLCQAHDCRLQMGGSDQWGNIVAGIDLVRRTQSKTAFGITFPLITTSSGIKMGKTHKGA 240

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WL+ E TS Y ++Q+W N DDADV  F    T LPM+EID++  ++G ++N AK I+A 
Sbjct: 241 VWLDPEKTSSYEYYQFWVNTDDADVAKFMALFTFLPMAEIDQVKGIEGAKMNAAKAILAH 300

Query: 305 EITTMVHGREEAEKAATAAMECFDM---------SIH-----------SQHMPTISISKD 344
           E T + HG   A +A  AA   F           S H           +  MP+ ++  +
Sbjct: 301 EATAIAHGLAAANEAFDAAATVFGAPSIPENLCPSSHIPRDGDGNLRAASSMPSSTVDIE 360

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
            + RG+  + L V+ G + S  +ARR +      +NN  I      I   DF   G I L
Sbjct: 361 RLKRGIAAVDLFVETGLSKSKGDARRLISQGGGYLNNDRIEAFDTLILDSDF-KDGEILL 419

Query: 405 SFGKKNH 411
             GKK +
Sbjct: 420 RAGKKRY 426


>gi|255527746|ref|ZP_05394600.1| tyrosyl-tRNA synthetase [Clostridium carboxidivorans P7]
 gi|296187585|ref|ZP_06855979.1| tyrosyl-tRNA synthetase [Clostridium carboxidivorans P7]
 gi|255508562|gb|EET84948.1| tyrosyl-tRNA synthetase [Clostridium carboxidivorans P7]
 gi|296047542|gb|EFG86982.1| tyrosyl-tRNA synthetase [Clostridium carboxidivorans P7]
          Length = 407

 Score =  342 bits (876), Expect = 8e-92,   Method: Compositional matrix adjust.
 Identities = 177/401 (44%), Positives = 248/401 (61%), Gaps = 7/401 (1%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I Q+++  E+  L + G    YIG+D TA SLHAGH   L L+  LQ  G+KPI
Sbjct: 7   LVARGLIAQVTDEDEIKELINNGKGIFYIGFDPTADSLHAGHFMALCLMKRLQMAGNKPI 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+GGGT  +GDPS R + R MM  + IQ N +  K     FI++G  K  A+MLNN  W
Sbjct: 67  VLLGGGTGHVGDPSGRTDLRTMMTPETIQHNCDCFKKQMERFIEFGDDK--AIMLNNAEW 124

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L  + YI++LRE+G +FSVN ML  E  + R+  E+ LSFLEFNYMI+Q+YDF  L KNY
Sbjct: 125 LLKLNYIEVLREVGVWFSVNNMLRAECYKQRM--EKGLSFLEFNYMIMQSYDFYHLHKNY 182

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
            C +Q+GG DQW N++ G  L         +A+T  LL  + G KMGKT SGA+WL+   
Sbjct: 183 GCNMQLGGDDQWSNMLGGTKLIHNKLGEDAYAMTITLLMNSEGKKMGKTASGAVWLDPNK 242

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVH 311
           TSP+ F+QYWRN+ DADV+   + LT LP+ ++D M K +G ++NEAK+I+A E+T +VH
Sbjct: 243 TSPFEFFQYWRNVADADVLKCIRMLTFLPLEQVDEMDKWEGSKLNEAKEILAYELTKLVH 302

Query: 312 GREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTNEARR 370
           G EEAEKA  A+   F       +MPT  IS D+++ G + +L L+V  G   S +EARR
Sbjct: 303 GEEEAEKAKNASHALFAGGTDDSNMPTTEISDDQLNDGAISILDLMVACGLTASKSEARR 362

Query: 371 HLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
            ++   + I++  + +    I L+   +   +K+  GKK +
Sbjct: 363 VVQQGGVFIDDDKVESIDCNITLEQLKN--GVKIRKGKKTY 401


>gi|291561959|emb|CBL40767.1| tyrosyl-tRNA synthetase [butyrate-producing bacterium SS3/4]
          Length = 407

 Score =  342 bits (876), Expect = 9e-92,   Method: Compositional matrix adjust.
 Identities = 175/400 (43%), Positives = 251/400 (62%), Gaps = 7/400 (1%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I Q++N  E+  + ++G    YIG+D TA SLH GH   L L+  LQ  G+KPI
Sbjct: 7   LQARGLIAQVTNEEEIRKMVNEGRAVFYIGFDPTADSLHVGHFMALCLMKRLQMAGNKPI 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GGGT ++GDPS R + R MM  + IQ N +  K   S FI +  GK  A+M+NN  W
Sbjct: 67  ALIGGGTGMVGDPSGRTDMRTMMTVETIQHNCDCFKKQMSRFIDFSEGK--AMMVNNAEW 124

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L ++ YID LREIG  FSVN ML  E  + R+  E+ LSFLEFNYM++Q+YDF EL + Y
Sbjct: 125 LMNLNYIDFLREIGPHFSVNNMLRAECYKQRM--EKGLSFLEFNYMLMQSYDFYELFQRY 182

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
            C +Q GG DQW N++ G +L  R       A+T  LL  + G KMGKT SGA+WL+   
Sbjct: 183 GCNMQFGGDDQWSNMLGGTELIRRKLGKDAHAMTITLLLNSEGKKMGKTQSGAVWLDPNK 242

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVH 311
           T+P+ F+QYWRN+ DADV+   + LT LP+ +ID M K +G ++N+AK+I+A E+T++VH
Sbjct: 243 TTPFEFYQYWRNVGDADVLKCLRMLTFLPLEQIDEMDKWEGSQLNQAKEILAYELTSLVH 302

Query: 312 GREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTNEARR 370
           G EEA+KA  +A   F     ++ MPT  +S  ++S G + LL+++ K+G   S +EARR
Sbjct: 303 GEEEAKKAQESARALFAGGAAAE-MPTAELSDADLSDGSIDLLSIVQKSGLCASRSEARR 361

Query: 371 HLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
           +++   + ++  I+ + K     +     G I +  GKKN
Sbjct: 362 NVEQGGVSVDGEIVKDIKAVYTKEQLSGEG-IVVKRGKKN 400


>gi|282882790|ref|ZP_06291395.1| tyrosine--tRNA ligase [Peptoniphilus lacrimalis 315-B]
 gi|281297201|gb|EFA89692.1| tyrosine--tRNA ligase [Peptoniphilus lacrimalis 315-B]
          Length = 423

 Score =  342 bits (876), Expect = 9e-92,   Method: Compositional matrix adjust.
 Identities = 169/401 (42%), Positives = 258/401 (64%), Gaps = 5/401 (1%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
             +L ERGFI  +++   L  +  +  +  YIG+D TA SL  GH  Q+ ++  +QK GH
Sbjct: 20  FDVLKERGFIDSVTDEENLKDVLEKEKIKFYIGFDATADSLTLGHFLQIRVMQHMQKQGH 79

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
            P++L+GGGT+ IGDPS +++ R++M  Q I  N +  K   S F+ +  GK   ++LNN
Sbjct: 80  IPVALLGGGTTSIGDPSGKNDMRKLMDRQTIDHNAKCFKEQISRFVDFSDGK--GMILNN 137

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL ++ +++ +R IG  FSVNRML+F+  ++R+  E+ L+F EF+YM++Q+YDF+ L 
Sbjct: 138 GDWLLNLNFLEFMRTIGVHFSVNRMLTFDCYKNRM--EKGLTFFEFSYMLMQSYDFLHLY 195

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
           +NY  +L++GGSDQW NII G +L  +L+  K+F +T  LL TA+G KMGKT  GAIWL+
Sbjct: 196 RNYGVKLELGGSDQWSNIIGGYELVRKLEEEKVFGMTFKLLITANGVKMGKTEKGAIWLS 255

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITT 308
           KE TSPY  +QY RN DD DV+ F K LT L M EI    KL+G+E+N+AK+++A E+  
Sbjct: 256 KEKTSPYEMFQYLRNTDDRDVIKFLKLLTLLDMDEIKEYEKLEGQELNKAKEVLAYEVVK 315

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
            VHG +EA+KA  A+   F     ++++P+  ++K+ +  G+G+L ++ + GF+ + +EA
Sbjct: 316 DVHGEDEAKKALEASKAMFGGQKTAENIPSTLMNKESLQEGIGILNILTEIGFSKTNSEA 375

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
           RR +    I IN+  I++  L I L  F     I L  GKK
Sbjct: 376 RRLINQGGISINDEKITDPALIITLDKFKDD-EIILRKGKK 415


>gi|167747098|ref|ZP_02419225.1| hypothetical protein ANACAC_01810 [Anaerostipes caccae DSM 14662]
 gi|317471911|ref|ZP_07931246.1| tyrosyl-tRNA synthetase [Anaerostipes sp. 3_2_56FAA]
 gi|167654058|gb|EDR98187.1| hypothetical protein ANACAC_01810 [Anaerostipes caccae DSM 14662]
 gi|316900684|gb|EFV22663.1| tyrosyl-tRNA synthetase [Anaerostipes sp. 3_2_56FAA]
          Length = 410

 Score =  342 bits (876), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 174/389 (44%), Positives = 243/389 (62%), Gaps = 5/389 (1%)

Query: 10  SILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
            IL ERGFI Q ++  EL  L  +  VT YIG+D TA SL AGH   +M +  +Q+ GH+
Sbjct: 7   DILQERGFIAQTTH-EELRDLLGKEKVTFYIGFDATADSLTAGHFLTVMAMMHMQRAGHR 65

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
           PI+L+GGGT++IGDPS + + R +M  + I+ N  + K   S FI +   K  A++ NN 
Sbjct: 66  PIALLGGGTTMIGDPSGKSDMRNIMTKETIEHNAMRFKEQLSRFISFDNDK--AILENNA 123

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
            WL  + Y+D LREIG  FSVN+ML+ E  + R+  E+ L+F EFNYM++QAYDF+EL +
Sbjct: 124 DWLLDLNYVDFLREIGVHFSVNKMLTAECYKQRM--EKGLTFFEFNYMLMQAYDFLELNR 181

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
            Y C L+MGG+DQW NI+ G DL  R +    F LT  LLT + G KMGKT+SGA+WL+ 
Sbjct: 182 RYGCTLEMGGNDQWSNILAGADLIRRKEQKNAFGLTLTLLTRSDGVKMGKTMSGAVWLDP 241

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTM 309
           E TSPY F+QYWRNI+D  V      LT LPM E+ R+  LQ  EIN+AK+++A E+T +
Sbjct: 242 EKTSPYEFYQYWRNIEDVKVEECLGLLTFLPMEEVRRLGALQDAEINKAKEVLAYEVTKI 301

Query: 310 VHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEAR 369
           VHG EEA+KA   A   F     S+  P    SK ++  G+ +LTL+V     ++ ++AR
Sbjct: 302 VHGEEEAKKAQAGAKALFVQGAASEDAPVHEYSKAQLEEGLDILTLLVDTKLCSTRSDAR 361

Query: 370 RHLKSNAIKINNSIISNEKLQIKLQDFDS 398
           R +    + +N   +++ K      DFD 
Sbjct: 362 RTVTQGGVSVNGEKVTDFKQVFTSADFDD 390


>gi|188590186|ref|YP_001922290.1| tyrosyl-tRNA synthetase [Clostridium botulinum E3 str. Alaska E43]
 gi|254783583|sp|B2UYM8|SYY_CLOBA RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|188500467|gb|ACD53603.1| tyrosyl-tRNA synthetase [Clostridium botulinum E3 str. Alaska E43]
          Length = 406

 Score =  341 bits (875), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 176/406 (43%), Positives = 255/406 (62%), Gaps = 7/406 (1%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           ++ L  L +RG+I Q ++  E   L     VT YIG+D TA SLH GH   +M +  +Q+
Sbjct: 2   ANVLDELLDRGYIKQFTHEEETRKLLENEKVTFYIGFDPTADSLHVGHFIAMMFMAHMQR 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+PI+L+GGGT+++GDPS + + R+M+  ++IQ N++ IK     FI +   K  AL+
Sbjct: 62  AGHRPIALLGGGTAMVGDPSGKTDMRKMLTKEQIQHNVDSIKKQMERFIDFSDDK--ALI 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  WL  + Y+D LRE+G  FSVNRMLS E  + RL  E+ LSFLEFNYM++Q YDF 
Sbjct: 120 VNNADWLLDLNYVDFLREVGVHFSVNRMLSAECFKQRL--EKGLSFLEFNYMLMQGYDFY 177

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L + Y C++++GG DQW N+I G++L  R       A+T  LLT + G KMGKT+ GA+
Sbjct: 178 VLNQKYGCKMELGGDDQWSNMIAGVELVRRKAQGDAMAMTCTLLTNSQGQKMGKTVGGAL 237

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
           WL+ +  SP++F+QYWRN+DDADV      LT LPM E+ R+  L+G EIN AKKI+A E
Sbjct: 238 WLDADKVSPFDFYQYWRNVDDADVEKCLALLTFLPMDEVRRLGALEGAEINGAKKILAFE 297

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           +T +VHG EEA+KA  AA   F       ++PT++I+K+++  G  +L +I K     S 
Sbjct: 298 VTKLVHGEEEAKKAEEAANALFSGGADMSNVPTVTIAKEDL--GSTVLDIIAKTKIVPSK 355

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
            E RR ++   + IN   I +    +   DF+  G+  +  GKKN+
Sbjct: 356 KEGRRLIEQGGLSINGEKIIDLTRTLNEDDFED-GSALIKRGKKNY 400


>gi|251780345|ref|ZP_04823265.1| tyrosine--tRNA ligase [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
 gi|243084660|gb|EES50550.1| tyrosine--tRNA ligase [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
          Length = 406

 Score =  341 bits (875), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 176/406 (43%), Positives = 254/406 (62%), Gaps = 7/406 (1%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           ++ L  L +RG+I Q ++  E   L     VT YIG+D TA SLH GH   +M +  +Q+
Sbjct: 2   ANVLDELLDRGYIKQFTHEEETRKLLGNEKVTFYIGFDPTADSLHVGHFIAMMFMAHMQR 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+PI+L+GGGT+++GDPS + + R+M+  ++IQ N++ IK     FI +   K  AL+
Sbjct: 62  AGHRPIALLGGGTAMVGDPSGKTDMRKMLTKEQIQHNVDSIKKQMERFIDFSDDK--ALI 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  WL  + Y+D LRE+G  FSVNRMLS E  + RL  E+ LSFLEFNYM++Q YDF 
Sbjct: 120 VNNADWLLDLNYVDFLREVGVHFSVNRMLSAECFKQRL--EKGLSFLEFNYMLMQGYDFY 177

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L + Y C++++GG DQW N+I G++L  R       A+T  LLT + G KMGKT+ GA+
Sbjct: 178 VLNQKYGCKMELGGDDQWSNMIAGVELVRRKAQGDAMAMTCTLLTNSQGQKMGKTVGGAL 237

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
           WL+ +  SP++F+QYWRN+DDADV      LT LPM E+ R+  L+G EIN AKKI+A E
Sbjct: 238 WLDADKVSPFDFYQYWRNVDDADVEKCLALLTFLPMDEVRRLGALEGAEINGAKKILAFE 297

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           +T +VHG EEA+KA  AA   F       ++PT++I K+++  G  +L +I K     S 
Sbjct: 298 VTKLVHGEEEAKKAEEAANALFSGGADMSNVPTVTIVKEDL--GSTVLDIIAKTKIVPSK 355

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
            E RR ++   + IN   I++    +   DF   G+  +  GKKN+
Sbjct: 356 KEGRRLIEQGGLSINGEKITDLTRTLNEDDF-KDGSALIKRGKKNY 400


>gi|34764162|ref|ZP_00145029.1| Tyrosyl-tRNA synthetase [Fusobacterium nucleatum subsp. vincentii
           ATCC 49256]
 gi|27886066|gb|EAA23375.1| Tyrosyl-tRNA synthetase [Fusobacterium nucleatum subsp. vincentii
           ATCC 49256]
          Length = 406

 Score =  340 bits (872), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 167/386 (43%), Positives = 240/386 (62%), Gaps = 6/386 (1%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           ++   +L ERG++ Q+++  E+  +  +  VT YIG+D TA SLH GH   +M +  +Q+
Sbjct: 6   ANVYDVLKERGYLKQLTHEEEIKEILGKEKVTFYIGFDPTADSLHVGHFIAMMFMAHMQQ 65

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+PI+L GGGT +IGDPS R + R MM  + I  N+E IK     FI +   K  A++
Sbjct: 66  HGHRPIALAGGGTGMIGDPSGRSDMRTMMTVEMIDHNVECIKKQMQKFIDFSDDK--AIL 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
            NN  WL ++ YI+ LR++G  FSVNRML+ E  +SR+  E  LSFLEFNYMI+QAYDF 
Sbjct: 124 ANNADWLRNLNYIEFLRDVGEHFSVNRMLAAECYKSRM--ENGLSFLEFNYMIMQAYDFY 181

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L   Y+C +Q+GG DQW N+I G++L  R      +A+T  LLT + G KMGKT  GA+
Sbjct: 182 VLNHKYNCTMQLGGDDQWSNMIAGVELLRRKDRKSAYAMTCTLLTNSEGKKMGKTAKGAL 241

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
           WL+ + T+PY F+QYWRNIDD DV      LT LPM E+ R+  L+  EINEAKK++A E
Sbjct: 242 WLDPKKTTPYEFYQYWRNIDDQDVEKCLALLTFLPMDEVRRLGTLKDAEINEAKKVLAYE 301

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           +T ++HG EEA KA  A    F    +  + P I +S ++ S+   LL ++V      + 
Sbjct: 302 VTKIIHGEEEATKAKEATEALFGSGNNLDNAPKIEVSDEDFSK--ELLDVLVDRKIIKTK 359

Query: 366 NEARRHLKSNAIKINNSIISNEKLQI 391
           +E RR ++ N + +N+  I + K  +
Sbjct: 360 SEGRRLIEQNGMSLNDEKIKDVKFTL 385


>gi|260495313|ref|ZP_05815440.1| tyrosyl-tRNA synthetase [Fusobacterium sp. 3_1_33]
 gi|260197091|gb|EEW94611.1| tyrosyl-tRNA synthetase [Fusobacterium sp. 3_1_33]
          Length = 406

 Score =  340 bits (872), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 166/386 (43%), Positives = 241/386 (62%), Gaps = 6/386 (1%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           ++   +L ERG++ Q+++  E+  +  +  VT YIG+D TA SLH GH   +M +  +Q+
Sbjct: 6   ANVYDVLKERGYLKQLTHEEEIKEILGKEKVTFYIGFDPTADSLHVGHFIAMMFMAHMQQ 65

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+PI+L GGGT +IGDPS R + R MM  + I  N+E IK     FI +   K  A++
Sbjct: 66  HGHRPIALAGGGTGMIGDPSGRSDMRTMMTVEMIDHNVECIKKQMQKFIDFSDDK--AIL 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
            NN  WL ++ YI+ LR++G  FSVNRML+ E  +SR+  E  LSFLEFNYMI+QAYDF 
Sbjct: 124 ANNADWLRNLNYIEFLRDVGEHFSVNRMLAAECYKSRM--ENGLSFLEFNYMIMQAYDFY 181

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L   Y+C +Q+GG DQW N+I G++L  R      +A+T  LLT + G KMGKT  GA+
Sbjct: 182 VLNHKYNCTMQLGGDDQWSNMIAGVELLRRKDRKSAYAMTCTLLTNSEGKKMGKTAKGAL 241

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
           WL+ + T+PY F+QYWRNIDD DV +    LT LPM E+ R+  L+  EINEAKK++A E
Sbjct: 242 WLDPKKTTPYEFYQYWRNIDDQDVENCLALLTFLPMDEVRRLGALKDAEINEAKKVLAYE 301

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           +T ++HG EEA KA  A    F    +  + P I ++ ++ S+   LL ++V      + 
Sbjct: 302 VTKIIHGEEEATKAKEATEALFGSGNNLDNAPKIEVTDEDFSK--ELLDVLVDRKIIKTK 359

Query: 366 NEARRHLKSNAIKINNSIISNEKLQI 391
           +E RR ++ N + +N+  I + K  +
Sbjct: 360 SEGRRLIEQNGMSLNDEKIKDVKFTL 385


>gi|187933845|ref|YP_001887352.1| tyrosyl-tRNA synthetase [Clostridium botulinum B str. Eklund 17B]
 gi|254783584|sp|B2TQ95|SYY_CLOBB RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|187721998|gb|ACD23219.1| tyrosine--tRNA ligase [Clostridium botulinum B str. Eklund 17B]
          Length = 406

 Score =  340 bits (872), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 177/406 (43%), Positives = 253/406 (62%), Gaps = 7/406 (1%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           ++ L  L +RG+I Q ++  E   L     VT YIG+D TA SLH GH   +M +  +Q+
Sbjct: 2   ANVLDELLDRGYIKQFTHEEETRKLLENEKVTFYIGFDPTADSLHVGHFIAMMFMAHMQR 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+PI+L+GGGT+++GDPS + + R+M+  ++IQ N++ IK     FI +   K  AL+
Sbjct: 62  AGHRPIALLGGGTAMVGDPSGKTDMRKMLTKEQIQHNVDSIKKQMERFIDFSDDK--ALI 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  WL  + Y+D LRE+G  FSVNRMLS E  + RL  E+ LSFLEFNYM++Q YDF 
Sbjct: 120 VNNADWLLDLNYVDFLREVGVHFSVNRMLSAECFKQRL--EKGLSFLEFNYMLMQGYDFY 177

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L + Y C++++GG DQW N+I G++L  R       A+T  LLT + G KMGKT+ GA+
Sbjct: 178 VLNQKYGCKMELGGDDQWSNMIAGVELVRRKAQGDAMAMTCTLLTNSQGQKMGKTVGGAL 237

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
           WL+ +  SP++F+QYWRN+DDADV      LT LPM E+ R+  L+G EIN AKKI+A E
Sbjct: 238 WLDADKVSPFDFYQYWRNVDDADVEKCLALLTFLPMDEVRRLGALEGAEINGAKKILAYE 297

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           +T +VHG EEA+KA  AA   F       ++PT+ ISK+++  G  +L +I K     S 
Sbjct: 298 VTKLVHGDEEAKKAEEAANALFSGGADMSNVPTVIISKEDL--GSTVLDVIAKVKIVPSK 355

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
            E RR ++   + IN   I+     +   DF   G+  +  GKKN+
Sbjct: 356 KEGRRLIEQGGLSINGEKITELTRTLNDDDF-KDGSALIKRGKKNY 400


>gi|158319957|ref|YP_001512464.1| tyrosyl-tRNA synthetase [Alkaliphilus oremlandii OhILAs]
 gi|158140156|gb|ABW18468.1| tyrosyl-tRNA synthetase [Alkaliphilus oremlandii OhILAs]
          Length = 409

 Score =  340 bits (872), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 178/405 (43%), Positives = 252/405 (62%), Gaps = 4/405 (0%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +   +L +RGF+ Q ++  E+  L  +  +T YIG+D TA SLH GH  QLM +  LQK 
Sbjct: 3   NIFDVLKDRGFVKQFTHEDEIRELLGKEKITFYIGFDPTADSLHVGHFVQLMAMSHLQKA 62

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI L GGGT ++GDPS R + R+MM  + IQ N+          I   +  + A++ 
Sbjct: 63  GHRPIFLAGGGTGMVGDPSGRTDMRQMMTPEIIQHNVNCFIDQSKRLIDL-SENSGAIIE 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL S+ YI  +REIG+ FSVNRML+ E  ++R+  E+ LSF EFNYMI+QAYDF+E
Sbjct: 122 NNANWLLSLNYISFIREIGTHFSVNRMLTAECFKNRM--EKGLSFFEFNYMIMQAYDFLE 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + Y CRLQ+GG DQW NII G DL  R+++   + +T  LLTT+ G KMGKT SGA+W
Sbjct: 180 LFRRYGCRLQLGGDDQWSNIIAGADLIRRVESEPAYGMTFTLLTTSEGVKMGKTQSGAVW 239

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           L+ + TSP+ F+QYWRN+ DADV      LT +PM E+ ++  L+G EIN AK+I+A E+
Sbjct: 240 LDPKKTSPFEFYQYWRNVADADVEKCLSLLTFIPMDEVRKLGALEGAEINRAKEILAFEV 299

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
           T +VHG EEA KA  AA   F        +P+  + + E++ G+ ++TL+V A    S  
Sbjct: 300 TKLVHGEEEATKAEEAAKALFGQGALGGSIPSTDLPRSELAEGIDIITLLVTAELIPSRG 359

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           E RR ++   + IN+  I++    I L DF     + +  GKK +
Sbjct: 360 EGRRLIQQGGVAINDEKITDINTVITL-DFFKEDTLMIKKGKKTY 403


>gi|256846725|ref|ZP_05552181.1| tyrosyl-tRNA synthetase [Fusobacterium sp. 3_1_36A2]
 gi|256717945|gb|EEU31502.1| tyrosyl-tRNA synthetase [Fusobacterium sp. 3_1_36A2]
          Length = 406

 Score =  340 bits (872), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 166/386 (43%), Positives = 241/386 (62%), Gaps = 6/386 (1%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           ++   +L ERG++ Q+++  E+  +  +  VT YIG+D TA SLH GH   +M +  +Q+
Sbjct: 6   ANVYDVLKERGYLKQLTHEEEIREILGKEKVTFYIGFDPTADSLHVGHFIAMMFMAHMQQ 65

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+PI+L GGGT +IGDPS R + R MM  + I  N+E IK     FI +   K  A++
Sbjct: 66  HGHRPIALAGGGTGMIGDPSGRSDMRTMMTVEMIDHNVECIKKQMQKFIDFSDDK--AIL 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
            NN  WL ++ YI+ LR++G  FSVNRML+ E  +SR+  E  LSFLEFNYMI+QAYDF 
Sbjct: 124 ANNADWLRNLNYIEFLRDVGEHFSVNRMLAAECYKSRM--ENGLSFLEFNYMIMQAYDFY 181

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L   Y+C +Q+GG DQW N+I G++L  R      +A+T  LLT + G KMGKT  GA+
Sbjct: 182 VLNHKYNCTMQLGGDDQWSNMIAGVELLRRKDRKSAYAMTCTLLTNSEGKKMGKTAKGAL 241

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
           WL+ + T+PY F+QYWRNIDD DV      LT LPM E+ R+  L+  EINEAKK++A E
Sbjct: 242 WLDPKKTTPYEFYQYWRNIDDQDVEKCLALLTFLPMDEVRRLGTLKDAEINEAKKVLAYE 301

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           +T ++HG EEA KA  A    F    +  + P I ++ ++ S+   LL ++V+     + 
Sbjct: 302 VTKIIHGEEEATKAKEATEALFGSGNNLDNAPKIEVTDEDFSK--ELLDVLVEKKILKTK 359

Query: 366 NEARRHLKSNAIKINNSIISNEKLQI 391
           +E RR ++ N + +N+  I + K  +
Sbjct: 360 SEGRRLIEQNGMSLNDEKIKDVKFTL 385


>gi|296328752|ref|ZP_06871266.1| tyrosine--tRNA ligase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 23726]
 gi|296154087|gb|EFG94891.1| tyrosine--tRNA ligase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 23726]
          Length = 402

 Score =  340 bits (872), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 167/386 (43%), Positives = 240/386 (62%), Gaps = 6/386 (1%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           ++   +L ERG++ Q+++  E+  +  +  VT YIG+D TA SLH GH   +M +  +Q+
Sbjct: 2   ANVYDVLKERGYLKQLTHEEEIREILGKEKVTFYIGFDPTADSLHVGHFIAMMFMAHMQQ 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+PI+L GGGT +IGDPS R + R MM  + I  N+E IK     FI +   K  A++
Sbjct: 62  HGHRPIALAGGGTGMIGDPSGRSDMRTMMTVEMIDHNVECIKKQMQKFIDFSEDK--AIL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
            NN  WL ++ YI+ LR++G  FSVNRML+ E  +SR+  E  LSFLEFNYMI+QAYDF 
Sbjct: 120 ANNADWLRNLNYIEFLRDVGEHFSVNRMLAAECYKSRM--ENGLSFLEFNYMIMQAYDFY 177

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L   Y+C +Q+GG DQW N+I G++L  R      +A+T  LLT + G KMGKT  GA+
Sbjct: 178 ILNHKYNCTMQLGGDDQWSNMIAGVELLRRKDRKPAYAMTCTLLTNSEGKKMGKTAKGAL 237

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
           WL+ E T+PY F+QYWRNIDD DV      LT LPM E+ R+  L+  EINEAKK++A E
Sbjct: 238 WLDPEKTTPYEFYQYWRNIDDQDVEKCLALLTFLPMDEVRRLGALKDAEINEAKKVLAYE 297

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           +T ++HG EEA KA  A    F    +  + P I ++ ++ S+   LL ++V      + 
Sbjct: 298 VTKIIHGEEEATKAKEATEALFGSGNNLDNAPKIEVTDEDFSK--ELLDVLVDRKIIKTK 355

Query: 366 NEARRHLKSNAIKINNSIISNEKLQI 391
           +E RR ++ N + +N+  I + K  +
Sbjct: 356 SEGRRLIEQNGMSLNDEKIKDVKFTL 381


>gi|19703406|ref|NP_602968.1| tyrosyl-tRNA synthetase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 25586]
 gi|81485043|sp|Q8RH57|SYY_FUSNN RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|19713476|gb|AAL94267.1| Tyrosyl-tRNA synthetase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 25586]
          Length = 406

 Score =  340 bits (871), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 167/386 (43%), Positives = 240/386 (62%), Gaps = 6/386 (1%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           ++   +L ERG++ Q+++  E+  +  +  VT YIG+D TA SLH GH   +M +  +Q+
Sbjct: 6   ANVYDVLKERGYLKQLTHEEEIREILGKEKVTFYIGFDPTADSLHVGHFIAMMFMAHMQQ 65

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+PI+L GGGT +IGDPS R + R MM  + I  N+E IK     FI +   K  A++
Sbjct: 66  HGHRPIALAGGGTGMIGDPSGRSDMRTMMTVEMIDHNVECIKKQMQKFIDFSEDK--AIL 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
            NN  WL ++ YI+ LR++G  FSVNRML+ E  +SR+  E  LSFLEFNYMI+QAYDF 
Sbjct: 124 ANNADWLRNLNYIEFLRDVGEHFSVNRMLAAECYKSRM--ENGLSFLEFNYMIMQAYDFY 181

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L   Y+C +Q+GG DQW N+I G++L  R      +A+T  LLT + G KMGKT  GA+
Sbjct: 182 ILNHKYNCTMQLGGDDQWSNMIAGVELLRRKDRKPAYAMTCTLLTNSEGKKMGKTAKGAL 241

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
           WL+ E T+PY F+QYWRNIDD DV      LT LPM E+ R+  L+  EINEAKK++A E
Sbjct: 242 WLDPEKTTPYEFYQYWRNIDDQDVEKCLALLTFLPMDEVRRLGALKDAEINEAKKVLAYE 301

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           +T ++HG EEA KA  A    F    +  + P I ++ ++ S+   LL ++V      + 
Sbjct: 302 VTKIIHGEEEATKAKEATEALFGSGNNLDNAPKIEVTDEDFSK--ELLDVLVDRKIIKTK 359

Query: 366 NEARRHLKSNAIKINNSIISNEKLQI 391
           +E RR ++ N + +N+  I + K  +
Sbjct: 360 SEGRRLIEQNGMSLNDEKIKDVKFTL 385


>gi|262067362|ref|ZP_06026974.1| tyrosine--tRNA ligase [Fusobacterium periodonticum ATCC 33693]
 gi|291378925|gb|EFE86443.1| tyrosine--tRNA ligase [Fusobacterium periodonticum ATCC 33693]
          Length = 402

 Score =  340 bits (871), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 167/386 (43%), Positives = 242/386 (62%), Gaps = 6/386 (1%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           ++   +L ERG++ Q+++  E+  L  +  VT YIG+D TA SLH GH   +M +  +Q+
Sbjct: 2   ANVYDVLKERGYLKQLTHEDEIKELLEKEKVTFYIGFDPTADSLHVGHFIAMMFMAHMQQ 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+PI+L GGGT ++GDPS R + R MM  + I  N+E IK     FI +  GK  A++
Sbjct: 62  HGHRPIALAGGGTGMVGDPSGRTDMRAMMTVETIDHNVECIKKQMQKFIDFSDGK--AIL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
            NN  WL ++ YI+ LR+IG  FSVNRML+ E  +SR+  E  LSFLEFNYMI+Q YDF 
Sbjct: 120 ENNANWLRNLNYIEFLRDIGEHFSVNRMLAAECYKSRM--ENGLSFLEFNYMIMQGYDFY 177

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L K Y+C +Q+GG DQW N+I G++L  R    + +A+T  LLT + G KMGKT  GA+
Sbjct: 178 VLNKKYNCTMQLGGDDQWSNMIAGVELIRRKDRRQAYAMTCTLLTNSEGKKMGKTAKGAL 237

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
           WL+ + T+PY F+QYWRNIDD DV +    LT LPM E+ R+  L+   INEAKK++A E
Sbjct: 238 WLDPKKTTPYEFYQYWRNIDDQDVENCLALLTFLPMDEVRRLGALKDAAINEAKKVLAYE 297

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           +T ++HG EEA KA  A    F    +  + P I +  ++ S+   LL ++V      + 
Sbjct: 298 VTKIIHGEEEATKAKEATEALFGSGNNLDNAPKIELVAEDFSK--ELLDVLVDRKILKTK 355

Query: 366 NEARRHLKSNAIKINNSIISNEKLQI 391
           +E RR ++ N + +N+  I++ K  +
Sbjct: 356 SEGRRLIEQNGMSLNDEKITDVKFTL 381


>gi|237736065|ref|ZP_04566546.1| tyrosyl-tRNA synthetase [Fusobacterium mortiferum ATCC 9817]
 gi|229421879|gb|EEO36926.1| tyrosyl-tRNA synthetase [Fusobacterium mortiferum ATCC 9817]
          Length = 407

 Score =  340 bits (871), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 174/406 (42%), Positives = 251/406 (61%), Gaps = 14/406 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + + +L ERG+I Q ++  E+     +  VT YIG+D TA SLH GH   +M +  +QK 
Sbjct: 5   NVVDVLLERGYIKQFTHEDEIREALGKEKVTFYIGFDPTADSLHVGHFIAMMFMAHMQKF 64

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI+L+GGGT++IGDPS R + R+MM  + I  N+  IK     FI +  GK  A++ 
Sbjct: 65  GHRPIALVGGGTAMIGDPSGRTDMRQMMTKETIAHNVACIKKQMEKFIDFSEGK--AILE 122

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  + Y+D +R+IG+ FSVNRML+ E  + R+  E  LSFLEFNYM++Q YDF+ 
Sbjct: 123 NNADWLLGLNYVDFIRDIGAHFSVNRMLAAECFKQRM--EAGLSFLEFNYMLMQGYDFLV 180

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L K + C +Q+GG DQW N+I G++L  + +  + FA+T  LLT + G KMGKT  GA+W
Sbjct: 181 LNKKHGCTMQLGGDDQWSNMIAGVELIRKKEQKQAFAMTCTLLTNSEGKKMGKTAKGALW 240

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           L+   TSPY F+QYWRN+ DADV      LT LPM E+ R+  L+G EIN+AKKI+A E+
Sbjct: 241 LDAAKTSPYEFYQYWRNVADADVEKCLALLTFLPMDEVRRLGALEGAEINQAKKILAYEV 300

Query: 307 TTMVHGREEAEKAATAAMECF---DMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
           T ++HG EEA KA   A   F   DMS    ++P+I    D++  G  LL L+V+     
Sbjct: 301 TKLIHGEEEALKAQQGAEGAFGGGDMS----NVPSIDFPSDKL--GTELLDLLVEHKLIK 354

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
           S  E R+ +  N +   ++ +++  ++I  +D    G   +  GKK
Sbjct: 355 SKGEGRKFVTQNGLTAADNKVTDFAMKIT-EDLFKDGEFVVKIGKK 399


>gi|320528949|ref|ZP_08030041.1| tyrosyl-tRNA synthetase [Selenomonas artemidis F0399]
 gi|320138579|gb|EFW30469.1| tyrosyl-tRNA synthetase [Selenomonas artemidis F0399]
          Length = 402

 Score =  340 bits (871), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 178/388 (45%), Positives = 251/388 (64%), Gaps = 10/388 (2%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           + IL ERGF+ Q ++   L  L ++G VT YIG+D TA SLHAGH   LM +  LQK GH
Sbjct: 5   IDILKERGFLAQCTDEEALRKLMAEGPVTFYIGFDPTADSLHAGHFIALMAMSHLQKAGH 64

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           +PI L+GGGT  +GDPS R + R++M  + I+ N E  K   + FI +   +  A+M++N
Sbjct: 65  RPICLVGGGTGTVGDPSGRTDMRKVMTDETIRHNCECFKKQIARFIDFTEDR--AIMVDN 122

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL S+ YI+LLR++G+ F+VNRML+ ES + R   E+ L+FLEFNYMI+QAYDF+EL 
Sbjct: 123 GDWLRSLNYIELLRDVGAHFTVNRMLAAESYKQRW--EKGLTFLEFNYMIMQAYDFLELN 180

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
           + Y CRLQMGG DQW NII G++L  R  +  +F LT+ LLT + GTKMGKT  GA+WL+
Sbjct: 181 RRYGCRLQMGGDDQWSNIIAGVELCRRKSSKTVFGLTNKLLTKSDGTKMGKTAGGALWLD 240

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITT 308
            E TSPY+F+QYWRNIDDADV +    LT LPM E+ R++  +G EIN +K+I+A E T 
Sbjct: 241 AEKTSPYDFYQYWRNIDDADVETCLSLLTYLPMDEVRRLSAAEGAEINRSKEILAYEATK 300

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
           +VHG E A +A + A   F     ++ +P +  +      G  L+ ++ + G   S  EA
Sbjct: 301 IVHGAEAAAQARSTAQALFSGGA-AEDVPKVVCAA-----GEKLVDVLTRGGVFASKGEA 354

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDF 396
           RR ++   + +N+  +S+E   +   DF
Sbjct: 355 RRLIQQGGVTLNDLRVSDEHYVLGDADF 382


>gi|160945187|ref|ZP_02092413.1| hypothetical protein FAEPRAM212_02706 [Faecalibacterium prausnitzii
           M21/2]
 gi|158442918|gb|EDP19923.1| hypothetical protein FAEPRAM212_02706 [Faecalibacterium prausnitzii
           M21/2]
          Length = 406

 Score =  340 bits (871), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 170/361 (47%), Positives = 240/361 (66%), Gaps = 7/361 (1%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG + QI++   +D++ + G  T YIG+D TA SL AGH   L L+  LQ  G+KPI
Sbjct: 7   LKARGLVAQITDEEIIDLI-NNGKATFYIGFDCTADSLTAGHFLALTLMKRLQLAGNKPI 65

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GGGT++IGDPS R + R+M+   +I  N    K     FI +  GK  ALMLNN  W
Sbjct: 66  ALIGGGTTMIGDPSGRTDMRKMLTKDDIAHNAACFKKQMEKFIDFSEGK--ALMLNNADW 123

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L  + Y++LLRE+G+ FSVN ML  E  + R+  E+ LSFLEFNYMI+Q+YDF  + ++Y
Sbjct: 124 LLDLNYVELLREVGACFSVNNMLRAECYKQRM--EKGLSFLEFNYMIMQSYDFYYMFQHY 181

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
            C +Q GG DQW N++ G +L  R      +A+T  LLT + G KMGKT   A+WL+   
Sbjct: 182 GCNMQFGGDDQWSNMLGGTELIRRKLGKDAYAMTVTLLTDSQGKKMGKTAGNAVWLDPNK 241

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVH 311
           TSP+ F+QYWRN+ DADV+   + LT LP+ +ID M+  Q + +NEAK+I+A E+T+MVH
Sbjct: 242 TSPFEFYQYWRNVGDADVMKCIRMLTFLPLEQIDEMSTWQNQRLNEAKEILAYEMTSMVH 301

Query: 312 GREEAEKAATAAMECFD-MSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTNEAR 369
           G+EEAEKA  AA   F   ++ ++HMP+  +++ +++ G +G+LTL+VKAG A S  EAR
Sbjct: 302 GKEEAEKAQNAARALFSGNAMDTEHMPSTQLTEADLTDGAIGILTLMVKAGLAASNGEAR 361

Query: 370 R 370
           R
Sbjct: 362 R 362


>gi|154505518|ref|ZP_02042256.1| hypothetical protein RUMGNA_03055 [Ruminococcus gnavus ATCC 29149]
 gi|153794176|gb|EDN76596.1| hypothetical protein RUMGNA_03055 [Ruminococcus gnavus ATCC 29149]
          Length = 410

 Score =  340 bits (871), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 177/400 (44%), Positives = 250/400 (62%), Gaps = 7/400 (1%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I Q+++   +  L ++G  T YIG+D TA SLH GH   L L+  LQ  G++PI
Sbjct: 10  LKARGLIAQVTDEERISKLVNEGKATFYIGFDPTADSLHVGHFMALCLMKRLQMAGNRPI 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GGGT  IGDPS R + R MM  ++IQ N +  K   S FI +  GK  ALM+NN  W
Sbjct: 70  ALIGGGTGYIGDPSGRTDMRSMMTPEQIQHNCDCFKEQMSKFIDFSEGK--ALMVNNADW 127

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L  + Y++LLRE+G+ FSVNRML+ E  + R+  E+ LSFLEFNYMI+QAYDF  L + Y
Sbjct: 128 LLDLNYVELLREVGAHFSVNRMLTAECYKQRM--EKGLSFLEFNYMIMQAYDFYALYQKY 185

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
            C LQ GG DQW N++ G +L  R       A+T  LL  + G KMGKT SGA+WL+   
Sbjct: 186 GCNLQFGGDDQWSNMLAGTELIRRKLGEDASAMTITLLLNSEGKKMGKTQSGAVWLDPNK 245

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVH 311
           TSP++F+QYWRN+ DADV+   + LT LP+ EID+M   +G ++N AK+I+A E+T +VH
Sbjct: 246 TSPFDFYQYWRNVADADVLKCIRMLTFLPLEEIDKMDSWEGAQLNTAKEILAFELTKLVH 305

Query: 312 GREEAEKAATAAMECFDMSIHSQHMPTISISKDEVS-RGMGLLTLIVKAGFATSTNEARR 370
           G EEA KA  +A   F     +Q MPT  +++++     + +LTL++K+G   S +EARR
Sbjct: 306 GEEEANKAQESARALFSQGNAAQ-MPTAELTEEDFEGNEIDILTLLLKSGLVPSKSEARR 364

Query: 371 HLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            ++   +  +   +++    +  +D  S   I L  GKKN
Sbjct: 365 AVQQGGVAADGEKVADIH-AVFTKDALSGEGIVLKKGKKN 403


>gi|295105579|emb|CBL03123.1| tyrosyl-tRNA synthetase [Faecalibacterium prausnitzii SL3/3]
          Length = 406

 Score =  339 bits (870), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 170/361 (47%), Positives = 240/361 (66%), Gaps = 7/361 (1%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG + QI++   +D++ + G  T YIG+D TA SL AGH   L L+  LQ  G+KPI
Sbjct: 7   LKARGLVAQITDEEIIDLI-NNGKATFYIGFDCTADSLTAGHFLALTLMKRLQLAGNKPI 65

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GGGT++IGDPS R + R+M+   +I  N    K     FI +  GK  ALMLNN  W
Sbjct: 66  ALIGGGTTMIGDPSGRTDMRKMLTKDDIAHNAACFKKQMEKFIDFSEGK--ALMLNNADW 123

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L  + Y++LLRE+G+ FSVN ML  E  + R+  E+ LSFLEFNYMI+Q+YDF  + ++Y
Sbjct: 124 LLDLNYVELLREVGACFSVNNMLRAECYKQRM--EKGLSFLEFNYMIMQSYDFYYMFQHY 181

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
            C +Q GG DQW N++ G +L  R      +A+T  LLT + G KMGKT   A+WL+   
Sbjct: 182 GCNMQFGGDDQWSNMLGGTELIRRKLGKDAYAMTVTLLTDSQGKKMGKTAGNAVWLDPNK 241

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVH 311
           TSP+ F+QYWRN+ DADV+   + LT LP+ +ID M+  Q + +NEAK+I+A E+T+MVH
Sbjct: 242 TSPFEFYQYWRNVGDADVMKCIRMLTFLPLEQIDEMSTWQDQRLNEAKEILAYEMTSMVH 301

Query: 312 GREEAEKAATAAMECFD-MSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTNEAR 369
           G+EEAEKA  AA   F   ++ ++HMP+  +++ +++ G +G+LTL+VKAG A S  EAR
Sbjct: 302 GKEEAEKAQNAARALFSGNAMDTEHMPSTQLTEADLTDGAIGILTLMVKAGLAASNGEAR 361

Query: 370 R 370
           R
Sbjct: 362 R 362


>gi|237743205|ref|ZP_04573686.1| tyrosyl-tRNA synthetase [Fusobacterium sp. 7_1]
 gi|229433501|gb|EEO43713.1| tyrosyl-tRNA synthetase [Fusobacterium sp. 7_1]
          Length = 406

 Score =  339 bits (870), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 166/386 (43%), Positives = 241/386 (62%), Gaps = 6/386 (1%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           ++   +L ERG++ Q+++  E+  +  +  VT YIG+D TA SLH GH   +M +  +Q+
Sbjct: 6   ANVYDVLKERGYLKQLTHEEEIREILGKEQVTFYIGFDPTADSLHVGHFIAMMFMAHMQQ 65

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+PI+L GGGT +IGDPS R + R MM  + I  N+E IK     FI +   K  A++
Sbjct: 66  HGHRPIALAGGGTGMIGDPSGRTDMRTMMTVEMIDHNVECIKKQMQKFIDFSDDK--AIL 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
            NN  WL ++ YI+ LR++G  FSVNRML+ E  +SR+  E  LSFLEFNYMI+QAYDF 
Sbjct: 124 ANNADWLRNLNYIEFLRDVGEHFSVNRMLAAECYKSRM--ENGLSFLEFNYMIMQAYDFY 181

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L   Y+C +Q+GG DQW N+I G++L  R      +A+T  LLT + G KMGKT  GA+
Sbjct: 182 VLNHKYNCTMQLGGDDQWSNMIAGVELLRRKDRKSAYAMTCTLLTNSEGKKMGKTAKGAL 241

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
           WL+ + T+PY F+QYWRNIDD DV      LT LPM E+ R+  L+  EINEAKK++A E
Sbjct: 242 WLDPKKTTPYEFYQYWRNIDDQDVEKCLALLTFLPMDEVRRLGALKDAEINEAKKVLAYE 301

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           +T ++HG EEA KA  A    F    +  + P I ++ ++ S+   LL ++V+     + 
Sbjct: 302 VTKIIHGEEEATKAKEATEALFGSGNNLDNAPKIEVTDEDFSK--ELLDILVERKILKTK 359

Query: 366 NEARRHLKSNAIKINNSIISNEKLQI 391
           +E RR ++ N + +N+  I + K  +
Sbjct: 360 SEGRRLIEQNGMSLNDEKIKDVKFTL 385


>gi|289765575|ref|ZP_06524953.1| tyrosyl-tRNA synthetase [Fusobacterium sp. D11]
 gi|289717130|gb|EFD81142.1| tyrosyl-tRNA synthetase [Fusobacterium sp. D11]
          Length = 406

 Score =  339 bits (870), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 166/386 (43%), Positives = 240/386 (62%), Gaps = 6/386 (1%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           ++   +L ERG++ Q+++  E+  +  +  VT YIG+D TA SLH GH   +M +  +Q+
Sbjct: 6   ANVYDVLKERGYLKQLTHEEEIREILGKEKVTFYIGFDPTADSLHVGHFIAMMFMAHMQQ 65

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+PI+L GGGT +IGDPS R + R MM  + I  N+E IK     FI +   K  A++
Sbjct: 66  HGHRPIALAGGGTGMIGDPSGRSDMRTMMTVEMIDHNVECIKKQMQKFIDFSDDK--AIL 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
            NN  WL ++ YI+ LR++G  FSVNRML+ E  +SR+  E  LSFLEFNYMI+QAYDF 
Sbjct: 124 ANNADWLRNLNYIEFLRDVGEHFSVNRMLAAECYKSRM--ENGLSFLEFNYMIMQAYDFY 181

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L   Y+C +Q+GG DQW N+I G++L  R      +A+T  LLT + G KMGKT  GA+
Sbjct: 182 VLNHKYNCTMQLGGDDQWSNMIAGVELLRRKDRKSAYAMTCTLLTNSEGKKMGKTAKGAL 241

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
           WL+ + T+PY F+QYWRNIDD DV      LT LPM E+ R+  L+  EINEAKK++A E
Sbjct: 242 WLDPKKTTPYEFYQYWRNIDDQDVEKCLALLTFLPMDEVRRLGALKDAEINEAKKVLAYE 301

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           +T ++HG EEA KA  A    F    +  + P I ++ ++ S+   LL ++V      + 
Sbjct: 302 VTKIIHGEEEATKAKEATEALFGSGNNLDNAPKIEVTDEDFSK--ELLDVLVDRKIIKTK 359

Query: 366 NEARRHLKSNAIKINNSIISNEKLQI 391
           +E RR ++ N + +N+  I + K  +
Sbjct: 360 SEGRRLIEQNGMSLNDEKIKDVKFTL 385


>gi|291520360|emb|CBK75581.1| tyrosyl-tRNA synthetase [Butyrivibrio fibrisolvens 16/4]
          Length = 406

 Score =  339 bits (869), Expect = 6e-91,   Method: Compositional matrix adjust.
 Identities = 168/374 (44%), Positives = 240/374 (64%), Gaps = 5/374 (1%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I Q++N  E+  L ++G  T YIG+D TA SL AGH   L L+  LQ  G+KPI
Sbjct: 7   LVARGLIAQVTNEEEIKKLINEGKATFYIGFDCTADSLTAGHFMALTLMKRLQMAGNKPI 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GGGT++IGDPS R + R+M+  ++I  N E  K     FI +  GK  ALM+NN  W
Sbjct: 67  ALIGGGTTMIGDPSGRTDMRKMLTREDIDHNAECFKRQMERFIDFSDGK--ALMVNNADW 124

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L  + Y+DLLRE+G+ FSVN ML  E  + R+  E+ LSFLEFNYMI+Q+YDF  + + Y
Sbjct: 125 LLDLNYVDLLREVGACFSVNNMLRAECYKQRM--EKGLSFLEFNYMIMQSYDFYYMFQKY 182

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
           +C L+ GG DQW N++ G +L  R       A+T  LLT + G KMGKT   A+WL+   
Sbjct: 183 NCNLEFGGDDQWSNMLGGTELIRRKLGKDAHAMTITLLTDSQGKKMGKTAGNAVWLDPNK 242

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVH 311
           T+P+ F+QYWRN+ DADV+   + LT LP+ EI +M   +G ++NEAK I+A E+T MVH
Sbjct: 243 TTPFEFYQYWRNVGDADVLKCIRMLTFLPIEEIQKMDTWEGAQLNEAKDILAYELTQMVH 302

Query: 312 GREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTNEARR 370
           G EEA+KA  A+   F    +S+++PT ++S D+   G + +L ++V AG + S  EARR
Sbjct: 303 GTEEADKAREASKALFAGGANSENIPTHTLSADDFRDGKVDILQILVSAGLSASRAEARR 362

Query: 371 HLKSNAIKINNSII 384
           +++   + +N   +
Sbjct: 363 NVQQGGVSVNGEKV 376


>gi|256027617|ref|ZP_05441451.1| tyrosyl-tRNA synthetase [Fusobacterium sp. D11]
          Length = 402

 Score =  339 bits (869), Expect = 6e-91,   Method: Compositional matrix adjust.
 Identities = 166/386 (43%), Positives = 240/386 (62%), Gaps = 6/386 (1%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           ++   +L ERG++ Q+++  E+  +  +  VT YIG+D TA SLH GH   +M +  +Q+
Sbjct: 2   ANVYDVLKERGYLKQLTHEEEIREILGKEKVTFYIGFDPTADSLHVGHFIAMMFMAHMQQ 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+PI+L GGGT +IGDPS R + R MM  + I  N+E IK     FI +   K  A++
Sbjct: 62  HGHRPIALAGGGTGMIGDPSGRSDMRTMMTVEMIDHNVECIKKQMQKFIDFSDDK--AIL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
            NN  WL ++ YI+ LR++G  FSVNRML+ E  +SR+  E  LSFLEFNYMI+QAYDF 
Sbjct: 120 ANNADWLRNLNYIEFLRDVGEHFSVNRMLAAECYKSRM--ENGLSFLEFNYMIMQAYDFY 177

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L   Y+C +Q+GG DQW N+I G++L  R      +A+T  LLT + G KMGKT  GA+
Sbjct: 178 VLNHKYNCTMQLGGDDQWSNMIAGVELLRRKDRKSAYAMTCTLLTNSEGKKMGKTAKGAL 237

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
           WL+ + T+PY F+QYWRNIDD DV      LT LPM E+ R+  L+  EINEAKK++A E
Sbjct: 238 WLDPKKTTPYEFYQYWRNIDDQDVEKCLALLTFLPMDEVRRLGALKDAEINEAKKVLAYE 297

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           +T ++HG EEA KA  A    F    +  + P I ++ ++ S+   LL ++V      + 
Sbjct: 298 VTKIIHGEEEATKAKEATEALFGSGNNLDNAPKIEVTDEDFSK--ELLDVLVDRKIIKTK 355

Query: 366 NEARRHLKSNAIKINNSIISNEKLQI 391
           +E RR ++ N + +N+  I + K  +
Sbjct: 356 SEGRRLIEQNGMSLNDEKIKDVKFTL 381


>gi|294784436|ref|ZP_06749727.1| tyrosine--tRNA ligase [Fusobacterium sp. 3_1_27]
 gi|294488008|gb|EFG35363.1| tyrosine--tRNA ligase [Fusobacterium sp. 3_1_27]
          Length = 406

 Score =  338 bits (868), Expect = 7e-91,   Method: Compositional matrix adjust.
 Identities = 166/386 (43%), Positives = 241/386 (62%), Gaps = 6/386 (1%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           ++   +L ERG++ Q+++  E+  +  +  VT YIG+D TA SLH GH   +M +  +Q+
Sbjct: 6   ANVYDVLKERGYLKQLTHEEEIREILGKEKVTFYIGFDPTADSLHVGHFIAMMFMAHMQQ 65

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+PI+L GGGT +IGDPS R + R MM  + I  N+E IK     FI +   K  A++
Sbjct: 66  HGHRPIALAGGGTGMIGDPSGRSDIRTMMTVEMIDHNVECIKKQMQKFIDFSDDK--AIL 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
            NN  WL ++ YI+ LR++G  FSVNRML+ E  +SR+  E  LSFLEFNYMI+QAYDF 
Sbjct: 124 ANNADWLRNLNYIEFLRDVGEHFSVNRMLAAECYKSRM--ENGLSFLEFNYMIMQAYDFY 181

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L   Y+C +Q+GG DQW N+I G++L  R      +A+T  LLT + G KMGKT  GA+
Sbjct: 182 VLNHKYNCTMQLGGDDQWSNMIAGVELLRRKDRKSAYAMTCTLLTNSEGKKMGKTAKGAL 241

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
           WL+ + T+PY F+QYWRNIDD DV      LT LPM E+ R+  L+  EINEAKK++A E
Sbjct: 242 WLDPKKTTPYEFYQYWRNIDDQDVEKCLALLTFLPMDEVRRLGALKDAEINEAKKVLAYE 301

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           +T ++HG EEA KA  A    F    +  + P I ++ ++ S+   LL ++V      + 
Sbjct: 302 VTKIIHGEEEATKAKEATEALFGSGNNLDNAPKIEVTDEDFSK--ELLDVLVDRKIIKTK 359

Query: 366 NEARRHLKSNAIKINNSIISNEKLQI 391
           +E RR ++ N + +N+  I++ K  +
Sbjct: 360 SEGRRLIEQNGMSLNDMKITDVKFTL 385


>gi|237740961|ref|ZP_04571442.1| tyrosyl-tRNA synthetase [Fusobacterium sp. 4_1_13]
 gi|229431005|gb|EEO41217.1| tyrosyl-tRNA synthetase [Fusobacterium sp. 4_1_13]
          Length = 406

 Score =  338 bits (867), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 165/386 (42%), Positives = 240/386 (62%), Gaps = 6/386 (1%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           ++   +L ERG++ Q+++  E+  +  +  VT YIG+D TA SLH GH   +M +  +Q+
Sbjct: 6   ANVYDVLKERGYLKQLTHEEEIREILGKEKVTFYIGFDPTADSLHVGHFIAMMFMAHMQQ 65

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+PI+L GGGT +IGDPS R + R MM  + I  N+E IK     FI +   K  A++
Sbjct: 66  HGHRPIALAGGGTGMIGDPSGRSDMRTMMTVEMIDHNVECIKKQMQKFIDFSDDK--AIL 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
            NN  WL ++ YI+ LR++G  FSVNRML+ E  +SR+  E  LSFLEFNYMI+QAYDF 
Sbjct: 124 ANNADWLRNLNYIEFLRDVGEHFSVNRMLAAECYKSRM--ENGLSFLEFNYMIMQAYDFY 181

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L   Y+C +Q+GG DQW N+I G++L  R      +A+T  LLT + G KMGKT  GA+
Sbjct: 182 VLNHKYNCTMQLGGDDQWSNMIAGVELLRRKDRKSAYAMTCTLLTNSEGKKMGKTAKGAL 241

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
           WL+ + T+PY F+QYWRNIDD DV      LT LPM E+ R+  L+  EINEAKK++A E
Sbjct: 242 WLDPKKTTPYEFYQYWRNIDDQDVEKCLALLTFLPMDEVRRLGALKDAEINEAKKVLAYE 301

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           +T ++HG EEA KA       F    +  + P I ++ ++ S+   LL ++V+     + 
Sbjct: 302 VTKIIHGEEEATKAKETTEALFGSGNNLDNAPKIEVTDEDFSK--ELLDVLVEKKILKTK 359

Query: 366 NEARRHLKSNAIKINNSIISNEKLQI 391
           +E RR ++ N + +N+  I + K  +
Sbjct: 360 SEGRRLIEQNGMSLNDEKIKDVKFTL 385


>gi|257439744|ref|ZP_05615499.1| tyrosine--tRNA ligase [Faecalibacterium prausnitzii A2-165]
 gi|257197764|gb|EEU96048.1| tyrosine--tRNA ligase [Faecalibacterium prausnitzii A2-165]
          Length = 405

 Score =  338 bits (866), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 168/375 (44%), Positives = 243/375 (64%), Gaps = 6/375 (1%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG + QI++   +D L + G  T YIG+D TA SL AGH   L L+  LQ  G+KPI
Sbjct: 7   LQARGLVAQITDNEIID-LINNGKATFYIGFDCTADSLTAGHFMALTLMKRLQMAGNKPI 65

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GGGT++IGDPS R + R+M+  ++I  N    K     FI +  GK  ALMLNN  W
Sbjct: 66  ALIGGGTTMIGDPSGRTDMRKMLTKEDIAHNAACFKKQMEKFIDFSEGK--ALMLNNADW 123

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L ++ Y++LLR++G+ FSVN ML  +    R+  E+ LSFLEFNYMI+Q+YDF  + ++Y
Sbjct: 124 LLNLNYVELLRDVGACFSVNNMLRAKRYEQRM--EKGLSFLEFNYMIMQSYDFYYMFQHY 181

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
            C +Q GG DQW N++ G +L  R      +A+T  LLT + G KMGKT   A+WL+   
Sbjct: 182 GCNMQFGGDDQWSNMLGGTELIRRKLGKDAYAMTITLLTDSQGKKMGKTAGNAVWLDPNK 241

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVH 311
           TSP+ F+QYWRN+ DADV+   + LT LP+ +ID M+  + + +NEAK+I+A E+T MVH
Sbjct: 242 TSPFEFYQYWRNVGDADVMKCIRMLTFLPLEQIDEMSTWKDQRLNEAKEILAYELTKMVH 301

Query: 312 GREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTNEARR 370
           G EEAEKA  AA   F  +  ++HMP+  +++ +++ G +G+LTL+VKAG A S  EARR
Sbjct: 302 GEEEAEKAQNAARALFSGAADTEHMPSTQLTEADLTDGSIGILTLMVKAGLAASNGEARR 361

Query: 371 HLKSNAIKINNSIIS 385
            +    + ++   ++
Sbjct: 362 LVVQGGVLVDGEKVA 376


>gi|238926803|ref|ZP_04658563.1| tyrosine--tRNA ligase [Selenomonas flueggei ATCC 43531]
 gi|238885335|gb|EEQ48973.1| tyrosine--tRNA ligase [Selenomonas flueggei ATCC 43531]
          Length = 400

 Score =  337 bits (865), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 174/388 (44%), Positives = 250/388 (64%), Gaps = 10/388 (2%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           + IL ERGF+ Q ++   L  L     VT Y G+D TA SLHAGHL  LM +  +Q+ GH
Sbjct: 4   VDILKERGFLAQCTDEAALRNLLDHEQVTFYTGFDPTADSLHAGHLIALMAMSHMQRAGH 63

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           +PI L+GGGT  +GDPS R + R++M  + I  N +  +   S FI +  G+  A+M++N
Sbjct: 64  RPICLVGGGTGTVGDPSGRTDMRKVMTDETIAHNCDCFRAQISHFIDFTDGR--AIMVDN 121

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL  + YIDLLR++G+ F+VNRML+ ES + R   E+ L+FLEFNYMI+QAYDF+EL 
Sbjct: 122 GDWLRKLNYIDLLRDVGAHFTVNRMLAAESYKQRW--EKGLTFLEFNYMIMQAYDFLELN 179

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
           + Y CRL+MGG DQW NII G++L  R K   +F LT+ LLT + G KMGKT  GA+WL+
Sbjct: 180 RRYGCRLEMGGDDQWSNIIAGVELCRRKKNITVFGLTNKLLTKSDGKKMGKTAGGALWLD 239

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITT 308
            + TSPY+F+QYWRN+DD DV +    LT LPM E+ R+  ++GKE+N +K+++A E+T 
Sbjct: 240 PKKTSPYDFYQYWRNVDDTDVSTCLSLLTFLPMEEVHRLTAVEGKEMNHSKEVLAYEVTK 299

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
           +VHG +EA KA   A   F   + S+ +P +      V+ G  L+  + + G  +S  EA
Sbjct: 300 IVHGEQEAHKAQEMARALFGGGV-SEQVPQL-----HVTCGEKLIDALTREGVFSSKGEA 353

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDF 396
           RR ++   + +N + IS+E   ++  DF
Sbjct: 354 RRLIQQGGVTLNETRISDEHYVLQEDDF 381


>gi|283795463|ref|ZP_06344616.1| tyrosine--tRNA ligase [Clostridium sp. M62/1]
 gi|291077125|gb|EFE14489.1| tyrosine--tRNA ligase [Clostridium sp. M62/1]
 gi|295114815|emb|CBL35662.1| tyrosyl-tRNA synthetase [butyrate-producing bacterium SM4/1]
          Length = 407

 Score =  337 bits (865), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 174/400 (43%), Positives = 251/400 (62%), Gaps = 7/400 (1%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I Q++N  E+  + ++G  T YIG+D TA SLH GH   L L+  LQ  G+KPI
Sbjct: 7   LVARGLIAQVTNEEEIKNMVNEGKATFYIGFDPTADSLHVGHFMALCLMKRLQMAGNKPI 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GGGT  IGDPS R + R MM  + IQ N +  K   S FI +  GK  ALM+NN  W
Sbjct: 67  ALIGGGTGYIGDPSGRTDMRSMMTPEIIQHNCDCFKKQMSRFIDFSDGK--ALMVNNADW 124

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L  + Y++LLRE+G  FSVNRML+ E  + R++R   LSFLEFNYMI+Q+YDF  L + Y
Sbjct: 125 LLGLNYVELLREVGPHFSVNRMLTAECYKQRMER--GLSFLEFNYMIMQSYDFYMLFQKY 182

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
            C +Q GG DQW N++ G +L  R       A+T  LL  + G KMGKT SGA+WL+   
Sbjct: 183 GCNMQFGGDDQWSNMLGGTELIRRKLGKDAHAMTITLLLNSEGKKMGKTQSGAVWLDPNK 242

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVH 311
           TSP+ F+QYWRN+ DADV+   + LT LP+ +ID M + +G ++N+AK+I+A E+T +VH
Sbjct: 243 TSPFEFYQYWRNVADADVLKCLRMLTFLPLEQIDEMDQWEGSQLNKAKEILAYELTALVH 302

Query: 312 GREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTNEARR 370
           G EEA KA  A+   F  S ++ +MPT  + +++ + G + +L+++ K+G A S +EARR
Sbjct: 303 GEEEAVKAQEASRALF-TSGNAANMPTAKLKEEDFADGSIDILSILQKSGLAPSRSEARR 361

Query: 371 HLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
           +++   + ++   + + K           G + +  GKKN
Sbjct: 362 NVEQGGVSVDGVQVKDIKAAFTKDQLSGEG-VVVKRGKKN 400


>gi|313895688|ref|ZP_07829244.1| tyrosine--tRNA ligase [Selenomonas sp. oral taxon 137 str. F0430]
 gi|312975814|gb|EFR41273.1| tyrosine--tRNA ligase [Selenomonas sp. oral taxon 137 str. F0430]
          Length = 402

 Score =  337 bits (864), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 177/388 (45%), Positives = 250/388 (64%), Gaps = 10/388 (2%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           + IL ERGF+ Q ++   L  L ++G VT YIG+D TA SLHAGH   LM +  LQK GH
Sbjct: 5   IDILKERGFLAQCTDEEALRKLMAEGPVTFYIGFDPTADSLHAGHFIALMAMSHLQKAGH 64

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           +PI L+GGGT  +GDPS R + R++M  + I+ N E  K   + FI +   +  A+M++N
Sbjct: 65  RPICLVGGGTGTVGDPSGRTDMRKVMTDETIRHNCECFKKQIAHFIDFTEDR--AIMVDN 122

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL S+ YI+LLR++G+ F+VNRML+ ES + R   E+ L+FLEFNYMI+QAYDF+EL 
Sbjct: 123 GDWLRSLNYIELLRDVGAHFTVNRMLAAESYKQRW--EKGLTFLEFNYMIMQAYDFLELN 180

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
           + Y CRLQMGG DQW NII G++L  R  +  +F LT+ LLT + GTKMGKT  GA+WL+
Sbjct: 181 RRYGCRLQMGGDDQWSNIIAGVELCRRKSSKTVFGLTNKLLTKSDGTKMGKTAGGALWLD 240

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITT 308
            E TSPY+F+QYWRNIDDADV +    LT LPM E+  ++  +G EIN +K+I+A E T 
Sbjct: 241 AEKTSPYDFYQYWRNIDDADVETCLSLLTYLPMDEVRHLSAAEGAEINRSKEILAYEATK 300

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
           +VHG E A +A + A   F     ++ +P +  +      G  L+ ++ + G   S  EA
Sbjct: 301 IVHGAEAAAQARSTAQALFSGGA-AEDVPKVVCAT-----GEKLVDVLTRGGVFASKGEA 354

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDF 396
           RR ++   + +N+  +S+E   +   DF
Sbjct: 355 RRLIQQGGVMLNDLRVSDEHYVLGDADF 382


>gi|229828792|ref|ZP_04454861.1| hypothetical protein GCWU000342_00866 [Shuttleworthia satelles DSM
           14600]
 gi|229793386|gb|EEP29500.1| hypothetical protein GCWU000342_00866 [Shuttleworthia satelles DSM
           14600]
          Length = 427

 Score =  337 bits (864), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 165/386 (42%), Positives = 246/386 (63%), Gaps = 5/386 (1%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I Q+++   +  L + G  T YIG+D TA SLH GH   L L+  LQ  G++PI
Sbjct: 27  LVARGLIAQLTDEERIKDLINHGRATFYIGFDPTADSLHVGHFMALTLMKRLQMGGNRPI 86

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GGGT++IGDPS R + R MM  ++I  N E  K   S FI++G  K  ALM+NN  W
Sbjct: 87  ALIGGGTAMIGDPSGRTDLRSMMTVEQIDHNCECFKKQMSRFIEFGEDK--ALMVNNADW 144

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L ++ ++D +RE+G+ FSVN ML   +  +R++R   LSFLEF+YM++QAYDF +L + Y
Sbjct: 145 LRNLNFLDFMREVGAHFSVNDMLRARAYVNRMER--GLSFLEFSYMLMQAYDFYKLYQEY 202

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
            C ++ GG DQW N++ G +L  +       A+T  LL    GTKMGKT  GA+WL+   
Sbjct: 203 GCNMEFGGDDQWSNMLAGTELIRKKLGEDAAAMTINLLLKHDGTKMGKTAGGAVWLDPGK 262

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVH 311
           TSPY+F+QYWRN+DDADV+ F + +T LP+ +ID M + +G ++NEAK+I+A E+T MVH
Sbjct: 263 TSPYDFFQYWRNVDDADVLKFLRMMTFLPLEQIDEMDRWEGAQLNEAKRILAHELTAMVH 322

Query: 312 GREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTNEARR 370
           G EEA+KA  AA   F   + S +MP   + +++   G + +L+++V  G A S ++ARR
Sbjct: 323 GEEEADKAQEAAKSLFAGGVSSDNMPQAVVREEDFKEGEIDILSVLVLCGLAQSRSDARR 382

Query: 371 HLKSNAIKINNSIISNEKLQIKLQDF 396
            ++   + +N   +++     +  DF
Sbjct: 383 AVEQGGVSVNGDKVTDIHTSYRPSDF 408


>gi|239625518|ref|ZP_04668549.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239519748|gb|EEQ59614.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 408

 Score =  337 bits (863), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 172/402 (42%), Positives = 245/402 (60%), Gaps = 6/402 (1%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I Q++N  E+  + ++G    YIG+D TA SLH GH   L L+  LQ  G+KPI
Sbjct: 7   LVARGLIAQVTNEEEIKKMVNEGKAVFYIGFDPTADSLHVGHFMALCLMKRLQMAGNKPI 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GGGT ++GDPS R + R MM  + IQ N +  K   S FI +  GK  A+M+NN  W
Sbjct: 67  ALIGGGTGMVGDPSGRSDMRTMMTPEIIQHNCDCFKKQMSRFIDFSEGK--AMMVNNAEW 124

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L  + YID LRE+G  FSVN ML  E  + R+  E+ LSFLEFNYMI+Q+YDF EL   Y
Sbjct: 125 LMGLNYIDFLREVGPHFSVNNMLRAECYKQRM--EKGLSFLEFNYMIMQSYDFYELFLRY 182

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
            C +Q GG DQW N++ G +L  R       A+T  LL  + G KMGKT SGA+WL+   
Sbjct: 183 GCNMQFGGDDQWSNMLGGTELIRRKLGKDAHAMTITLLLNSEGKKMGKTQSGAVWLDPNK 242

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVH 311
           T+P+ F+QYWRN+ DADV+   + LT LP+ +ID M + +G ++N+AK+I+A E+T +VH
Sbjct: 243 TTPFEFYQYWRNVADADVLKCLRMLTFLPIEQIDEMDQWEGSQLNQAKEILAFELTKLVH 302

Query: 312 GREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTNEARR 370
           G EEA KA   A   F     + +MPT  +S+++   G + +L ++ K+G   S +EARR
Sbjct: 303 GEEEAAKAQEGARALFAAGGSTANMPTFELSEEDFVDGSIDILGVLQKSGLCASRSEARR 362

Query: 371 HLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           +++   + ++ S + + K       F   G +    GKKN +
Sbjct: 363 NVEQGGVSVDGSQVKDIKAAFAKDQFAGDGMV-FKRGKKNFM 403


>gi|331268714|ref|YP_004395206.1| tyrosyl-tRNA synthetase [Clostridium botulinum BKT015925]
 gi|329125264|gb|AEB75209.1| tyrosyl-tRNA synthetase [Clostridium botulinum BKT015925]
          Length = 406

 Score =  337 bits (863), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 172/400 (43%), Positives = 255/400 (63%), Gaps = 7/400 (1%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L ERG+I Q ++  E+  L  +  +T YIG+D TA SLH GH   +M +  +Q+ GH+PI
Sbjct: 8   LMERGYIKQTTHEEEIRELLGKEKITFYIGFDPTADSLHVGHFIAMMFMAHMQRAGHRPI 67

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GGGT++IGDPS + + R+M+  ++I  ++  IK     FI +   K  A+++NN  W
Sbjct: 68  ALVGGGTAMIGDPSGKTDMRKMLTKEQIDVHVAGIKKQLGRFIDFSDDK--AILVNNADW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L   KY++ +REIG  FSVN+ML+ E  + RL  E+ LSFLEFNYM++QAYDF+EL + Y
Sbjct: 126 LLDAKYVEFIREIGIHFSVNKMLTAECFKQRL--EKGLSFLEFNYMLMQAYDFLELNRKY 183

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
            C +++GG DQW N+I G+DL  R +    FA+T  LLT + G KMGKT+ GA+WL+ E 
Sbjct: 184 GCVMELGGDDQWSNMIAGMDLIRRKERKPAFAMTCSLLTNSEGQKMGKTVGGALWLDAEK 243

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVH 311
           TSPY+F+QYWRN+ DADV      LT +PM E+ R++ L+G  INEAKK++A E+T +VH
Sbjct: 244 TSPYDFYQYWRNVADADVEKCLSLLTFVPMDEVKRLSALEGAAINEAKKVLAFEVTKLVH 303

Query: 312 GREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRH 371
           G EEA KA  AA   F       ++PT+ ISKD +  G  LL +++      S  E RR 
Sbjct: 304 GEEEARKAQAAAEALFSGGADMSNVPTVEISKDAI--GTVLLEILLNGKVIPSKKEGRRL 361

Query: 372 LKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           ++   + +N+  +++  + ++  D    G+  +  GKK +
Sbjct: 362 IEQGGLYMNDENVTDPNVTLEESDL-KDGSALIKKGKKKY 400


>gi|253681500|ref|ZP_04862297.1| tyrosine--tRNA ligase [Clostridium botulinum D str. 1873]
 gi|253561212|gb|EES90664.1| tyrosine--tRNA ligase [Clostridium botulinum D str. 1873]
          Length = 406

 Score =  337 bits (863), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 172/400 (43%), Positives = 256/400 (64%), Gaps = 7/400 (1%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L ERG+I Q ++  E+  L  +  +T YIG+D TA SLH GH   +M +  +QK GH+PI
Sbjct: 8   LMERGYIKQTTHEEEIRELLGKEKITFYIGFDPTADSLHVGHFIAMMFMSHMQKAGHRPI 67

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GGGT++IGDPS + + R+M+  ++I  ++  IK     FI +   K  A+++NN  W
Sbjct: 68  ALVGGGTAMIGDPSGKTDMRKMLTKEQIDIHVAGIKKQLGRFIDFSDDK--AILVNNADW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L   KY++ +REIG  FSVN+ML+ E  + RL  E+ LSFLEFNYM++QAYDF+EL + Y
Sbjct: 126 LLGAKYVEFIREIGIHFSVNKMLTAECFKQRL--EKGLSFLEFNYMLMQAYDFLELNRKY 183

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
            C +++GG DQW N+I G+DL  R +    FA+T  LLT + G KMGKT+ GA+WL+ E 
Sbjct: 184 GCVMELGGDDQWSNMIAGMDLIRRKERKPAFAMTCSLLTNSEGQKMGKTVGGALWLDAEK 243

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVH 311
           TSPY+F+QYWRN+ DADV      LT +PM E+ R++ L+G  INEAKK++A E+T +VH
Sbjct: 244 TSPYDFYQYWRNVADADVEKCLSLLTFVPMDEVKRLSALEGAAINEAKKVLAFEVTKLVH 303

Query: 312 GREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRH 371
           G EEA+KA  AA   F       ++PT+ ISK+++  G  LL +++      S  E RR 
Sbjct: 304 GEEEAQKAQAAAEALFSGGADMSNVPTVEISKEDI--GTALLEILLNGKVIPSKKEGRRL 361

Query: 372 LKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           ++   + +N+  +++    ++  D    G+  +  GKK +
Sbjct: 362 IEQGGLYMNDENVTDPNATLEESDL-KDGSALIKKGKKKY 400


>gi|313114152|ref|ZP_07799704.1| tyrosyl-tRNA synthetase [Faecalibacterium cf. prausnitzii KLE1255]
 gi|310623561|gb|EFQ06964.1| tyrosyl-tRNA synthetase [Faecalibacterium cf. prausnitzii KLE1255]
          Length = 444

 Score =  337 bits (863), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 168/376 (44%), Positives = 247/376 (65%), Gaps = 7/376 (1%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG + QI++   +D++ + G  T YIG+D TA SL AGH   L L+  LQ  G+KPI
Sbjct: 45  LKARGLVAQITDEEIIDLI-NNGKATFYIGFDCTADSLTAGHFMALTLMKRLQMAGNKPI 103

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GGGT++IGDPS R + R+M+  ++I  N    K     FI +  GK  ALMLNN  W
Sbjct: 104 ALIGGGTTMIGDPSGRTDMRKMLTKEDIAHNAACFKKQMEKFIDFSEGK--ALMLNNADW 161

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L ++ Y++LLR++G+ FSVN ML  +    R+  E+ LSFLEFNYMI+Q+YDF  + ++Y
Sbjct: 162 LLNLNYVELLRDVGACFSVNNMLRAKCYEQRM--EKGLSFLEFNYMIMQSYDFYYMFQHY 219

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
            C +Q GG DQW N++ G +L  R      +A+T  LLT + G KMGKT   A+WL+   
Sbjct: 220 GCNMQFGGDDQWSNMLGGTELIRRKLGKDAYAMTITLLTDSQGKKMGKTAGNAVWLDPNK 279

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVH 311
           TSP+ F+QYWRN+ DADV+   + LT LP+ +ID M+  + + +NEAK+I+A E+T+MVH
Sbjct: 280 TSPFEFYQYWRNVGDADVMKCIRMLTFLPLEQIDEMSTWKDQRLNEAKEILAYELTSMVH 339

Query: 312 GREEAEKAATAAMECFDMS-IHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTNEAR 369
           G+EEAEKA  AA   F  S + ++HMP+  +++ +++ G +G+LTL+VKAG A S  EAR
Sbjct: 340 GKEEAEKAQNAARALFSGSAMDTEHMPSTQLTEADLTDGSIGILTLMVKAGLAASNGEAR 399

Query: 370 RHLKSNAIKINNSIIS 385
           R +    + ++   ++
Sbjct: 400 RLVVQGGVLVDGEKVA 415


>gi|237738790|ref|ZP_04569271.1| tyrosyl-tRNA synthetase [Fusobacterium sp. 2_1_31]
 gi|294781946|ref|ZP_06747278.1| tyrosine--tRNA ligase [Fusobacterium sp. 1_1_41FAA]
 gi|229423893|gb|EEO38940.1| tyrosyl-tRNA synthetase [Fusobacterium sp. 2_1_31]
 gi|294481757|gb|EFG29526.1| tyrosine--tRNA ligase [Fusobacterium sp. 1_1_41FAA]
          Length = 406

 Score =  336 bits (861), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 168/386 (43%), Positives = 242/386 (62%), Gaps = 6/386 (1%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           ++   +L ERG++ Q+++  E+  L  +  VT YIG+D TA SLH GH   +M +  +Q+
Sbjct: 6   ANVYDVLKERGYLKQLTHEEEIKELLEKEKVTFYIGFDPTADSLHVGHFIAMMFMAHMQQ 65

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+PI+L GGGT +IGDPS R + R MM  + I  N+E IK     FI +  GK  A++
Sbjct: 66  HGHRPIALAGGGTGMIGDPSGRSDMRTMMTVETIDHNVECIKKQMQKFIDFSDGK--AIL 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
            NN  WL ++ YI+ LR+IG  FSVNRML+ E  +SR+  E  LSFLEFNYMI+Q YDF 
Sbjct: 124 ENNANWLRNLNYIEFLRDIGEHFSVNRMLAAECYKSRM--ENGLSFLEFNYMIMQGYDFY 181

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L K Y+C +Q+GG DQW N+I G++L  R    + +A+T  LLT + G KMGKT  GA+
Sbjct: 182 VLNKKYNCTMQLGGDDQWSNMIAGVELIRRKDRRQAYAMTCTLLTNSEGKKMGKTAKGAL 241

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
           WL+ + T+PY F+QYWRNIDD DV +    LT LPM E+ R+  L+   INEAKK++A E
Sbjct: 242 WLDPKKTTPYEFYQYWRNIDDQDVENCLALLTFLPMDEVRRLGALKDAAINEAKKVLAYE 301

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           +T ++HG EEA KA  A    F    +  + P I +  ++ S+   LL ++V      + 
Sbjct: 302 VTKIIHGEEEATKAKEATEALFGSGNNLDNAPKIELGAEDFSK--ELLDVLVDRKILKTK 359

Query: 366 NEARRHLKSNAIKINNSIISNEKLQI 391
           +E RR ++ N + +N+  I++ K  +
Sbjct: 360 SEGRRLIEQNGMSLNDEKITDVKFTL 385


>gi|310657576|ref|YP_003935297.1| tyrosyl-tRNA synthetase 1 (tyrosine--tRNA ligase 1) (tyrrs 1)
           [Clostridium sticklandii DSM 519]
 gi|308824354|emb|CBH20392.1| Tyrosyl-tRNA synthetase 1 (Tyrosine--tRNA ligase 1) (TyrRS 1)
           [Clostridium sticklandii]
          Length = 408

 Score =  335 bits (860), Expect = 6e-90,   Method: Compositional matrix adjust.
 Identities = 173/396 (43%), Positives = 250/396 (63%), Gaps = 11/396 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +   +L ERGFI Q ++  E+  L  +  V  Y GYD TA SLH GH  Q + +  LQ  
Sbjct: 3   NVFDVLKERGFIAQATHEDEIRELLGKEKVVFYTGYDPTADSLHVGHFLQAVAMRHLQLA 62

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH PI L+GGGT++IGDPS R + R+M+  + I+EN E+ K     FI +     +A+M 
Sbjct: 63  GHTPIVLIGGGTTMIGDPSGRTDMRQMITPETIKENGERFKAQLGRFIDFTA--DNAIMA 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL +++YI  LREIG  FSVNRML+ E  +SR+  E+ LSFLEFNYMI+QAYDF+E
Sbjct: 121 NNADWLMNLEYIPFLREIGMHFSVNRMLTAECFKSRM--EKGLSFLEFNYMIMQAYDFLE 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + + C +Q+GG DQW NII G DL  R +  + + +T  LLTT+ G KMGKT++GA+W
Sbjct: 179 LNRRHGCVMQLGGDDQWSNIIAGTDLIRRKEGKQAYGMTFNLLTTSDGKKMGKTMAGAVW 238

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           L++E T+PY F+QYWRNI+DA V      LT LPM E+ R+  L+G EIN AK+++A E+
Sbjct: 239 LDREKTTPYEFFQYWRNIEDASVEKCLALLTFLPMDEVRRLGTLEGSEINHAKEVLAYEV 298

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
           T +VH +E+A+ A  AA   F  +  S + PT       +  G+ +L ++ + G   S++
Sbjct: 299 TKLVHSKEDADAAMEAARALFTNNNASANAPTTGFELARLESGIAILDVLKETGLVPSSS 358

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNI 402
           EARR +    I +N+       ++++  DF+ T ++
Sbjct: 359 EARRLISQGGISVND-------IKVEAIDFNVTADM 387


>gi|225376594|ref|ZP_03753815.1| hypothetical protein ROSEINA2194_02236 [Roseburia inulinivorans DSM
           16841]
 gi|225211477|gb|EEG93831.1| hypothetical protein ROSEINA2194_02236 [Roseburia inulinivorans DSM
           16841]
          Length = 408

 Score =  335 bits (860), Expect = 6e-90,   Method: Compositional matrix adjust.
 Identities = 174/390 (44%), Positives = 249/390 (63%), Gaps = 5/390 (1%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I Q+++  E+  L + G  T YIG+D TA SLH GH   L L+  LQ  G+KPI
Sbjct: 7   LVARGLIAQVTDEEEIKDLINNGKATFYIGFDPTADSLHVGHFMALCLMKRLQMAGNKPI 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GGGT++IGDPS R + R+MM  + IQ N +  K   S FI +  GK  ALM+NN  W
Sbjct: 67  ALIGGGTAMIGDPSGRTDMRQMMTPETIQHNCDCFKKQMSRFIDFSEGK--ALMVNNADW 124

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L  + YID+LRE+G+ FSVNRML+ E  + R+  E+ LSFLEFNYMI+Q+YDF  L + Y
Sbjct: 125 LMDLNYIDVLREVGAHFSVNRMLTAECYKQRM--EKGLSFLEFNYMIMQSYDFYTLYQKY 182

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
            C ++ GG DQW N++ G +L  R      +A+T  LL  + G KMGKT SGA+WL+ E 
Sbjct: 183 GCNMEFGGDDQWSNMLGGTELIRRKLGKDAYAMTINLLLNSEGKKMGKTQSGAVWLDPEK 242

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVH 311
           TSP++F+QYWRN+ D+DV+   + LT LP+ EID M   +G ++N+AK+I+A E+T +VH
Sbjct: 243 TSPFDFFQYWRNVADSDVLKCIRMLTFLPLEEIDAMESWEGAQLNQAKEILAFELTKLVH 302

Query: 312 GREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTNEARR 370
           G EEA KA  A+   F     S HMPT+ +S  + + G M +L+L+VK   A S ++ARR
Sbjct: 303 GEEEAAKAREASHALFAGGGDSAHMPTVELSSADFADGDMDILSLLVKTELAPSRSDARR 362

Query: 371 HLKSNAIKINNSIISNEKLQIKLQDFDSTG 400
            ++   + + +  +++ +       F + G
Sbjct: 363 AVEQGGVSVADEKVTDIRTAYNADSFGADG 392


>gi|225390680|ref|ZP_03760404.1| hypothetical protein CLOSTASPAR_04435 [Clostridium asparagiforme
           DSM 15981]
 gi|225043298|gb|EEG53544.1| hypothetical protein CLOSTASPAR_04435 [Clostridium asparagiforme
           DSM 15981]
          Length = 408

 Score =  335 bits (860), Expect = 7e-90,   Method: Compositional matrix adjust.
 Identities = 165/392 (42%), Positives = 244/392 (62%), Gaps = 5/392 (1%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I Q++N  E+  + ++G    YIG+D TA SLH GH   L L+  LQ  G++PI
Sbjct: 7   LVARGLIAQVTNEEEIKKMVNEGKAVFYIGFDPTADSLHVGHFMALCLMKRLQMAGNRPI 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GGGT +IGDPS R + R MM  + IQ N +  K   S FI +  GK  A+M+NN  W
Sbjct: 67  ALIGGGTGMIGDPSGRSDMRTMMTPEIIQHNCDCFKKQMSRFIDFSEGK--AMMVNNAEW 124

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L  + YI+ LRE+G  FSVN ML  E  + R+  E+ LSFLEFNYMI+Q+YDF EL + Y
Sbjct: 125 LLGLNYIEFLREVGPHFSVNNMLRAECYKQRM--EKGLSFLEFNYMIMQSYDFYELFQRY 182

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
            C +Q GG DQW N++ G +L  R       A+T  LL  + G KMGKT SGA+WL+ E 
Sbjct: 183 GCNMQFGGDDQWSNMLGGTELIRRKLGKDAHAMTITLLLNSEGKKMGKTQSGAVWLDPEK 242

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVH 311
           T+P++F+QYWRN+ DADV+   + LT LP+ +ID M + +G ++N AK+I+A E+T +VH
Sbjct: 243 TTPFDFYQYWRNVADADVLKCLRMLTFLPIEQIDEMDQWEGSQLNTAKEILAYELTKLVH 302

Query: 312 GREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTNEARR 370
           G EEA+KA   A   F     +++MP   ++ ++   G + +L+++ K+G + S +EARR
Sbjct: 303 GEEEADKAQEGARALFSAGGSTENMPICELADEDFKDGSIDILSVLHKSGLSASRSEARR 362

Query: 371 HLKSNAIKINNSIISNEKLQIKLQDFDSTGNI 402
           +++   + ++   + + K       F+  G +
Sbjct: 363 NVEQGGVSVDGEAVKDVKAVYARSQFEGEGMV 394


>gi|166033543|ref|ZP_02236372.1| hypothetical protein DORFOR_03269 [Dorea formicigenerans ATCC
           27755]
 gi|166026728|gb|EDR45485.1| hypothetical protein DORFOR_03269 [Dorea formicigenerans ATCC
           27755]
          Length = 407

 Score =  335 bits (860), Expect = 7e-90,   Method: Compositional matrix adjust.
 Identities = 183/400 (45%), Positives = 252/400 (63%), Gaps = 7/400 (1%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I Q+++   +  L + G  T YIG+D TA SLH GH   L L+  LQ+ G+KPI
Sbjct: 7   LQARGLIAQVTDEERIRDLVNNGKATFYIGFDPTADSLHVGHFMALCLMKRLQEAGNKPI 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GGGT  IGDPS R + R MM  ++IQ N +  K   S FI +  GK  ALM+NN  W
Sbjct: 67  ALIGGGTGYIGDPSGRTDMRSMMTPEQIQHNCDCFKKQMSRFIDFSDGK--ALMVNNADW 124

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L  + YI++LREIG  FSVNRML+ E  + R+  E+ LSFLEFNYMI+QAYDF EL + Y
Sbjct: 125 LLGLNYIEVLREIGPHFSVNRMLTAECYKQRM--EKGLSFLEFNYMIMQAYDFYELFQKY 182

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
            C L+ GG DQW N++ G +L  R       A+T  LL  + G KMGKT SGA+WL+   
Sbjct: 183 GCNLEFGGDDQWSNMLAGTELIRRKLGKDASAMTITLLLNSEGKKMGKTQSGAVWLDPNK 242

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVH 311
           TSP+ F+QYWRN+ DADV+   + LT LP+ EID M K +G E+N+AK+I+A E+T++VH
Sbjct: 243 TSPFEFYQYWRNVGDADVLKCIRMLTFLPLEEIDAMDKWEGAELNKAKEILAFELTSLVH 302

Query: 312 GREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTNEARR 370
           G EEA+KA  AA   F     +  MP   +++ +++ G + ++TL+VK G   S +EARR
Sbjct: 303 GEEEAKKAQEAAKALFSTGA-AADMPKTELTEADLTDGNIDIMTLLVKCGLTASKSEARR 361

Query: 371 HLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            ++   + ++   I++       +DF   G I L  GKKN
Sbjct: 362 AVQQGGVSVDGEKITDIAHTFAGEDFGGEG-IVLKKGKKN 400


>gi|255658184|ref|ZP_05403593.1| tyrosine--tRNA ligase [Mitsuokella multacida DSM 20544]
 gi|260849492|gb|EEX69499.1| tyrosine--tRNA ligase [Mitsuokella multacida DSM 20544]
          Length = 402

 Score =  335 bits (859), Expect = 8e-90,   Method: Compositional matrix adjust.
 Identities = 177/391 (45%), Positives = 251/391 (64%), Gaps = 9/391 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           ++    L ERGFI Q +N +EL  L  +  VT YIG+D TA SLHAGH   LM +  +Q+
Sbjct: 2   ANVFDTLKERGFIAQCTNEKELRELFDKERVTFYIGFDPTADSLHAGHFIALMAMAHMQR 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+PI L+GGGT  +GDP+ R + R+M+  ++I+ N E  K   + FI +  GK  A+M
Sbjct: 62  AGHRPICLVGGGTGTVGDPTGRTDMRKMLTDEDIEHNCECFKKQIARFIDFSDGK--AIM 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  WL  + YIDLLR++G+ F+VNRML+ E  + R   E+ L+FLEFNYM++QAYDF+
Sbjct: 120 VNNGDWLRKLNYIDLLRDVGACFTVNRMLAAECYKQRW--EKGLTFLEFNYMVMQAYDFL 177

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           EL + Y C+L+MGG DQW NII G++L  R     ++ LT+ LLT + G KMGKT  GA+
Sbjct: 178 ELNRRYGCKLEMGGDDQWSNIIAGVELNRRKNNVAVYGLTNKLLTKSDGKKMGKTAGGAL 237

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
           WL+ E TSPY F+QYWRN+DDADV      LT LPM E+ R++ L+G  INEAK ++A E
Sbjct: 238 WLDAEKTSPYEFYQYWRNVDDADVEKCLSLLTFLPMEEVHRLSSLEGSAINEAKTVLAYE 297

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           +T +VHG EEA KA  AA   F  +  +Q MPT++        G  LL ++       S 
Sbjct: 298 VTKIVHGEEEANKAKKAAEALFGGAGSTQDMPTVA-----AETGKKLLDVLTAGKVFASK 352

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
           +E RR ++ N + +N++ +++    ++  DF
Sbjct: 353 SEGRRLIQQNGLSLNDAKVTDVDYILQASDF 383


>gi|225174287|ref|ZP_03728286.1| tyrosyl-tRNA synthetase [Dethiobacter alkaliphilus AHT 1]
 gi|225170072|gb|EEG78867.1| tyrosyl-tRNA synthetase [Dethiobacter alkaliphilus AHT 1]
          Length = 407

 Score =  335 bits (858), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 172/401 (42%), Positives = 246/401 (61%), Gaps = 7/401 (1%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I Q+++  E+  L + G    YIG+D TA SLH GH   L L+  LQ  G+KPI
Sbjct: 7   LIARGLIAQVTDEEEIKELVNSGQAIFYIGFDPTADSLHVGHFMALSLMKRLQMAGNKPI 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+GGGT+ IGDPS R + R MM  + IQ N E  K     FI++G  K  A+M+NN  W
Sbjct: 67  VLLGGGTAYIGDPSGRTDLRNMMTPEIIQHNSECFKKQMEKFIEFGDDK--AIMVNNADW 124

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L  + YID+LRE+G  FSVN ML  E  + R+  E+ LSFLEFNYMI+Q+YDF  L + Y
Sbjct: 125 LLELNYIDMLREVGPHFSVNNMLRAECYKQRM--EKGLSFLEFNYMIMQSYDFFYLYQKY 182

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
            C +Q GG DQW N++ G +L  R      +A+T  LL T+ G KMGKT  GA+WL+   
Sbjct: 183 GCNMQFGGDDQWSNMLGGTELIRRKLGEDAYAMTITLLMTSEGNKMGKTAKGAVWLDPNK 242

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVH 311
           T P+ F+QYWRN+ DADV+   + LT LP+ EI+ M K +G ++NEAK+I+A E+T ++H
Sbjct: 243 TPPFEFFQYWRNVADADVLKCIRMLTFLPLEEIEAMDKWEGSQLNEAKEILAYELTKLIH 302

Query: 312 GREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTNEARR 370
           G EEA+KA +A+   F       +MPT  I+ ++++ G +G+L L++  G   S +EARR
Sbjct: 303 GEEEAKKAKSASHALFAGGTDDSNMPTTEITTEQLTDGAIGILDLLLACGLTPSKSEARR 362

Query: 371 HLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
            ++   + + +  + +    I  +   +   IK+  GKK +
Sbjct: 363 LVQQGGVFVEDEKVESIDTNITAEQLKN--GIKIRKGKKTY 401


>gi|229824686|ref|ZP_04450755.1| hypothetical protein GCWU000182_00034 [Abiotrophia defectiva ATCC
           49176]
 gi|229791015|gb|EEP27129.1| hypothetical protein GCWU000182_00034 [Abiotrophia defectiva ATCC
           49176]
          Length = 421

 Score =  334 bits (856), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 167/392 (42%), Positives = 243/392 (61%), Gaps = 5/392 (1%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I Q++N  E+  + ++G    YIG+D TA SLH GH   L L+  LQ  G+KPI
Sbjct: 21  LKARGLIAQVTNEEEISKMVNEGKAVFYIGFDPTADSLHVGHFMALCLMKRLQMAGNKPI 80

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +LMGGGT +IGDPS R + R MM  + I+ N +  K     FI +G GK  A+M+NN  W
Sbjct: 81  ALMGGGTGMIGDPSGRTDMRTMMTKETIEHNCKCFKKQMERFIDFGEGK--AIMVNNADW 138

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L  + YI+ LR+IG  FSVNRML+ E  + R+  E+ LSFLEFNYM++Q +DF  L + Y
Sbjct: 139 LLDLNYIEFLRDIGPHFSVNRMLAAECYKQRM--EKGLSFLEFNYMLMQGFDFYMLYQKY 196

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
            C ++ GG DQW N++ G +L  R       A+T  LL  + G KMGKT +GA+WL+ E 
Sbjct: 197 GCNMEFGGDDQWSNMLAGTELIRRKLGKDAHAMTITLLLNSEGKKMGKTANGAVWLDPEK 256

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVH 311
           T+PY+F+QYWRN+DD DV+   K LT LP+ EI  M   +G ++NEAK+I+A E+T +VH
Sbjct: 257 TTPYDFYQYWRNVDDGDVIKCLKLLTFLPIEEILAMEAWEGAKLNEAKEILAFELTKLVH 316

Query: 312 GREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGM-GLLTLIVKAGFATSTNEARR 370
           G EEA KA +AA   F      ++MP+ +IS ++   G+  ++TL+ K+    + +E RR
Sbjct: 317 GEEEANKAQSAAKALFAGGGSLENMPSFTISMEDARDGVFDIITLLHKSRLVATRSEGRR 376

Query: 371 HLKSNAIKINNSIISNEKLQIKLQDFDSTGNI 402
            ++   + +N+  +++     K ++    G I
Sbjct: 377 AVEQGGVVVNDEKVTDFAATFKPEELQGEGLI 408


>gi|304436501|ref|ZP_07396475.1| tyrosine--tRNA ligase [Selenomonas sp. oral taxon 149 str. 67H29BP]
 gi|304370547|gb|EFM24198.1| tyrosine--tRNA ligase [Selenomonas sp. oral taxon 149 str. 67H29BP]
          Length = 400

 Score =  334 bits (856), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 171/388 (44%), Positives = 250/388 (64%), Gaps = 10/388 (2%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           + IL ERGF+ Q ++   L  L     VT Y G+D TA SLHAGHL  LM +  +Q+ GH
Sbjct: 4   VDILKERGFLAQCTDEAALRDLLDHEQVTFYTGFDPTADSLHAGHLIALMAMSHMQRAGH 63

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           +PI L+GGGT  +GDPS R + R++M  + I  N +  +   S FI +  G+  A+M++N
Sbjct: 64  RPICLVGGGTGTVGDPSGRTDMRKVMTDETIAHNCDCFRAQISHFIDFTDGR--AIMVDN 121

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL  + YIDLLR++G+ F+VNRML+ ES + R   E+ L+FLEFNYMI+QAYDF+EL 
Sbjct: 122 GDWLRKLNYIDLLRDVGAHFTVNRMLAAESYKQRW--EKGLTFLEFNYMIMQAYDFLELN 179

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
           + Y CRL+MGG DQW NII G++L  R K   +F LT+ LLT + G KMGKT  GA+WL+
Sbjct: 180 RRYGCRLEMGGDDQWSNIIAGVELCRRKKNITVFGLTNKLLTKSDGKKMGKTAGGALWLD 239

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITT 308
            + TSPY+F+QYWRN+DD DV++    LT LPM E+ R+  ++G+E+N +K+++A E+T 
Sbjct: 240 PKKTSPYDFYQYWRNVDDTDVLTCLSLLTFLPMEEVHRLTSVEGQEMNHSKEVLAYEVTK 299

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
           +VHG +EA KA   A   F   + S+ +P +      V+ G  L+  + + G  +S  EA
Sbjct: 300 IVHGEQEAHKAQEMARALFGGGV-SEQVPQL-----HVTCGEKLIDALTREGVFSSKGEA 353

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDF 396
           RR ++   + +N + +S+E   ++   F
Sbjct: 354 RRLIQQGGVTLNETRVSDEHYVLQADVF 381


>gi|261366954|ref|ZP_05979837.1| tyrosine--tRNA ligase [Subdoligranulum variabile DSM 15176]
 gi|282571072|gb|EFB76607.1| tyrosine--tRNA ligase [Subdoligranulum variabile DSM 15176]
          Length = 406

 Score =  333 bits (855), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 165/381 (43%), Positives = 241/381 (63%), Gaps = 5/381 (1%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I Q+++  E+  L + G  T YIG+D TA SL AGH   L L+  LQ  G++PI
Sbjct: 7   LKARGLIAQVTDEEEIKELINNGKATFYIGFDCTADSLTAGHFMALTLMKRLQMAGNRPI 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GGGT++IGDPS R + R+M+  ++I  N E  K     F+++G GK  ALMLNN  W
Sbjct: 67  ALIGGGTTMIGDPSGRSDMRKMLTKEDIAHNAECFKRQMERFVEFGEGK--ALMLNNADW 124

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L ++ Y++LLRE+G+ FSVN ML  E  + R+     LSFLEFNYMI+Q+YDF  + ++Y
Sbjct: 125 LLNLNYVELLREVGACFSVNNMLRAECYKQRMV--NGLSFLEFNYMIMQSYDFYYMFQHY 182

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
            C +Q GG DQW N++ G +L  R      +A+T  LLT + G KMGKT   A+WL+   
Sbjct: 183 GCNMQFGGDDQWSNMLGGTELIRRKLNKDAYAMTITLLTDSQGKKMGKTAGNAVWLDPNK 242

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVH 311
           TSP++F+QYWRN+ DADV+   + LT LP+ +ID M   QG+++N+AK+I+A E+T MVH
Sbjct: 243 TSPFDFYQYWRNVGDADVLKCIRMLTFLPLEQIDEMDHWQGEQLNQAKEILAYELTKMVH 302

Query: 312 GREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTNEARR 370
           G+ EAEKA   A   F  +   ++MP+  +    V  G +GLL  +V AG   S  EAR+
Sbjct: 303 GKAEAEKAQQTARGLFSGAADHENMPSTVLDASLVKDGAVGLLAAMVAAGLCGSNREARQ 362

Query: 371 HLKSNAIKINNSIISNEKLQI 391
            ++   + ++    ++ K+ +
Sbjct: 363 LVQQGGVLVDGEKANDPKMTL 383


>gi|307244426|ref|ZP_07526537.1| tyrosine--tRNA ligase [Peptostreptococcus stomatis DSM 17678]
 gi|306492245|gb|EFM64287.1| tyrosine--tRNA ligase [Peptostreptococcus stomatis DSM 17678]
          Length = 407

 Score =  333 bits (854), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 168/386 (43%), Positives = 238/386 (61%), Gaps = 5/386 (1%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I QI+N  E+  L + G    Y+G+D TA SLH GH   L ++  LQ  G+KP+
Sbjct: 7   LQARGLIAQITNEEEIRNLVNTGKAVFYLGFDPTADSLHVGHFMALSMMRRLQLAGNKPV 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+GGGT  IGDPS R + R MM  + IQ N +  K   S FI +   K  A+M+NN  W
Sbjct: 67  VLVGGGTGYIGDPSGRTDMRTMMTPETIQHNCDCFKVQMSKFIDFSDDK--AIMVNNADW 124

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L  + YID+LRE+G  FSVN ML  E  ++R+  E+ LSFLEFNYM++Q+YDF  L K Y
Sbjct: 125 LLKLNYIDMLREVGPHFSVNNMLRAECYKNRM--EKGLSFLEFNYMVMQSYDFYHLYKEY 182

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
            C +Q+GG+DQW N++ G +L  R       A+T PLLT A GTKMGKT  GA+WL+   
Sbjct: 183 GCNIQLGGNDQWSNLLGGTELIRRKLGEDAHAMTIPLLTKADGTKMGKTAGGAVWLDPNK 242

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVH 311
           TSP++F+QYWRN+DDADV++F K+LT L + EI  M   +G ++NEAK+++A E+T +VH
Sbjct: 243 TSPFDFYQYWRNVDDADVINFIKKLTFLTLEEIKPMEAWEGAKLNEAKELLAYEMTRLVH 302

Query: 312 GREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTNEARR 370
             E+A+KA  A+   F       +MPT  I   +++ G + +  L+++     S +E RR
Sbjct: 303 SEEDAKKAQEASKALFAGGADDSNMPTTEIDPAKLTDGAINVTDLMLECDLVPSRSEVRR 362

Query: 371 HLKSNAIKINNSIISNEKLQIKLQDF 396
            ++   + I +  + +  L I L D 
Sbjct: 363 LVQQGGLTIADKKVEDLNLTISLDDL 388


>gi|154498035|ref|ZP_02036413.1| hypothetical protein BACCAP_02016 [Bacteroides capillosus ATCC
           29799]
 gi|150273025|gb|EDN00182.1| hypothetical protein BACCAP_02016 [Bacteroides capillosus ATCC
           29799]
          Length = 408

 Score =  333 bits (853), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 171/376 (45%), Positives = 239/376 (63%), Gaps = 5/376 (1%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG + Q+++  E+  L + G  T YIG+D TA SLH GH   LML+  LQK G++PI
Sbjct: 7   LKARGLVAQVTDEEEIKELINNGKATFYIGFDPTADSLHVGHFMALMLMRRLQKAGNRPI 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GGGT ++GDPS R + R MM  + IQ N E  K   S FI +  GK  ALMLNN  W
Sbjct: 67  ALIGGGTGMVGDPSGRTDMRSMMTVETIQHNCECFKKQMSKFIDFSEGK--ALMLNNADW 124

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L  + Y++LLRE+G+ FSVN ML  E  + R+  E+ LSFLEFNYMI+Q+YDF  + +  
Sbjct: 125 LMKLNYVELLREVGACFSVNNMLRAECYKQRM--EKGLSFLEFNYMIMQSYDFYHMFQTI 182

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
            C LQ GG DQW N++ G +L  R      +A+T  LL T+ G KMGKT  GA+WL+ E 
Sbjct: 183 GCNLQCGGDDQWSNMLGGTELIRRKLGKDAYAMTITLLLTSEGKKMGKTQKGAVWLDPEK 242

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVH 311
           T+PY F+QYWRNI DADV+   + LT LP+ +ID M K +G ++N AK+I+A E+T +VH
Sbjct: 243 TTPYEFYQYWRNIGDADVLKCLRMLTDLPLEQIDEMDKWEGAQLNTAKEILAYELTKLVH 302

Query: 312 GREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTNEARR 370
             EEA KA  AA   F       +MPT +++ D+++ G + +L L++K G   S  EARR
Sbjct: 303 SEEEAMKAQDAARALFSQGGDKANMPTTTLTADDLTDGAVAVLDLMLKCGLVPSKKEARR 362

Query: 371 HLKSNAIKINNSIISN 386
            ++   ++ +   I++
Sbjct: 363 LVEQGGVEADGVKITD 378


>gi|326204657|ref|ZP_08194513.1| tyrosyl-tRNA synthetase [Clostridium papyrosolvens DSM 2782]
 gi|325985224|gb|EGD46064.1| tyrosyl-tRNA synthetase [Clostridium papyrosolvens DSM 2782]
          Length = 408

 Score =  333 bits (853), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 171/412 (41%), Positives = 258/412 (62%), Gaps = 5/412 (1%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S    +L ERGFI QI++  E+  L S+  VT YIG+D TA SLH GH  QLM++  +Q+
Sbjct: 2   SSVFDVLKERGFIAQITHEEEVKKLLSEEKVTFYIGFDPTADSLHIGHFLQLMVMAHMQQ 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH PI L+GGGT+++GDP+ +++ R+MM  + ++ N +  K   S FI +   K  A+M
Sbjct: 62  AGHVPIVLIGGGTAMVGDPTGKNDMRKMMTREIVKHNADSFKTQISKFIDFSDNK--AIM 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           ++N  WL  + Y+  LRE+G  FSVNRML+ E  +SR+  E+ L+FLEFNYM++Q+YDF+
Sbjct: 120 VDNGDWLMDLNYVQFLREVGVHFSVNRMLTAECFKSRM--EKGLTFLEFNYMLMQSYDFL 177

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L   Y C++++GG DQW NI+ GI+L  + +   ++ +T  LLTT+ G KMGKT +GA+
Sbjct: 178 VLNDKYGCKMELGGDDQWSNILGGINLVRKSEGRDVYGMTFKLLTTSEGKKMGKTENGAV 237

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
           WL+ E T+PY F+QYWRNI D DV +    +T LPM E+ R+  L+   INEAK ++A E
Sbjct: 238 WLDPEKTTPYEFYQYWRNIADNDVENCLALMTFLPMDEVRRLGALKDAGINEAKAVLAYE 297

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           +T +VHG EEA+KA  AA   F     S  +P + +   ++  G+ ++ L++ AG   S 
Sbjct: 298 VTKIVHGEEEAKKAKEAAEAIFGGKGKSDSIPFVEVKSADIEAGIKIIDLLMIAGLTPSK 357

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           +EARR ++   + +N+  I+     +   D    G + L  GKK+ +   L 
Sbjct: 358 SEARRAVQQGGVLLNDEKITAFDYTVGTTDL-VNGEMMLQKGKKSFVKVKLV 408


>gi|315924164|ref|ZP_07920390.1| tyrosine--tRNA ligase [Pseudoramibacter alactolyticus ATCC 23263]
 gi|315622566|gb|EFV02521.1| tyrosine--tRNA ligase [Pseudoramibacter alactolyticus ATCC 23263]
          Length = 413

 Score =  333 bits (853), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 169/381 (44%), Positives = 238/381 (62%), Gaps = 5/381 (1%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I Q+++  ++  L   G    YIG+D TA SLH GH   L L+  LQ+ G++P+
Sbjct: 13  LVARGLIAQVTDEPQIKELIDNGGAKFYIGFDPTADSLHVGHFMALCLMRRLQQAGNRPV 72

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+GGGT+ IGDPS R + R+MM ++ I  N+   K   S FI++G  K  A++++N  W
Sbjct: 73  VLIGGGTAHIGDPSGRTDLRQMMTTETIAHNVACFKKQMSRFIEFGEDK--AILVDNADW 130

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L  + Y+D +R+IG+ FSVN ML  E  + RL  E+ LSFLEFNYMI+QAYDF  L K Y
Sbjct: 131 LLDLNYVDTIRDIGAHFSVNNMLRAECYKQRL--EKGLSFLEFNYMIMQAYDFYHLHKAY 188

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
              +Q GG+DQW N++ G +L  R      +A+T  LL  + G KMGKT  GA+WL+ + 
Sbjct: 189 GVNMQFGGNDQWSNMLAGTELIRRKLGEDAYAMTITLLLNSEGKKMGKTAKGAVWLDPDK 248

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVH 311
           TSP++F+QYWRN+DDADV+   K LT LP+ EI+ MA      INE K+I+A E+T +VH
Sbjct: 249 TSPFDFYQYWRNVDDADVMKCLKMLTFLPLDEIEAMANWPDNRINEEKEILAYELTALVH 308

Query: 312 GREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSR-GMGLLTLIVKAGFATSTNEARR 370
           G EEA+KA   A   F  S     MPT  I +D ++   +GL+ L+V  G A S +EARR
Sbjct: 309 GEEEAKKAQHTAKSLFAGSGSDADMPTSEIGEDVLTEDAIGLIDLLVATGLAPSKSEARR 368

Query: 371 HLKSNAIKINNSIISNEKLQI 391
            +K N I ++   ++++   I
Sbjct: 369 LIKQNGISVDGVKVNDQNASI 389


>gi|326201599|ref|ZP_08191470.1| methyl-accepting chemotaxis sensory transducer [Clostridium
           papyrosolvens DSM 2782]
 gi|325988199|gb|EGD49024.1| methyl-accepting chemotaxis sensory transducer [Clostridium
           papyrosolvens DSM 2782]
          Length = 407

 Score =  332 bits (852), Expect = 6e-89,   Method: Compositional matrix adjust.
 Identities = 171/401 (42%), Positives = 242/401 (60%), Gaps = 7/401 (1%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I Q+++  E+  L + G  T YIG+D TA SLH GH   L L+  LQ  G+KP+
Sbjct: 7   LVARGLIAQVTDEEEIRELINSGKATFYIGFDPTADSLHVGHFMALCLMKRLQMAGNKPV 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+GGGT  IGDPS R + R MM  + IQ N +  K     FI++G  K  A+M+NN  W
Sbjct: 67  VLLGGGTGYIGDPSGRTDLRSMMTPETIQHNCDCFKKQMERFIEFGDDK--AIMVNNADW 124

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L  + YI+LLR++G+ FSVN ML  E  + R+  E+ LSFLE NYMI+Q+YDF  L +NY
Sbjct: 125 LLKLNYIELLRDVGAHFSVNNMLRAECYKQRM--EKGLSFLELNYMIMQSYDFYYLYQNY 182

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
            C +Q GG+DQW N++ G +L  R      +A+T  LL  + G KMGKT  GA+WL+   
Sbjct: 183 GCNMQFGGNDQWSNMLGGTELIRRKLGKDAYAMTITLLMNSEGNKMGKTAKGAVWLDPNK 242

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVH 311
           T+P+ F+QYWRN+ DADV+   + LT LP+ +ID M K +G ++NEAK+I+A E+T ++H
Sbjct: 243 TTPFEFYQYWRNVGDADVLKCIRMLTFLPLEQIDAMDKWKGSQLNEAKEILAYELTKLIH 302

Query: 312 GREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTNEARR 370
             EEA+KA  A+   F       HMPT  I  + +  G +G+L LI       S +EARR
Sbjct: 303 DEEEAQKAKDASHALFAAGTDDSHMPTTEIEVEHLVDGVIGILDLITACRLTASKSEARR 362

Query: 371 HLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
            ++   I IN++ +  E +   +        +K+  GKK +
Sbjct: 363 LIQQGGIFINDAKV--ESIDCNITSKQLKNGVKIRKGKKTY 401


>gi|302339639|ref|YP_003804845.1| tyrosyl-tRNA synthetase [Spirochaeta smaragdinae DSM 11293]
 gi|301636824|gb|ADK82251.1| tyrosyl-tRNA synthetase [Spirochaeta smaragdinae DSM 11293]
          Length = 411

 Score =  332 bits (851), Expect = 6e-89,   Method: Compositional matrix adjust.
 Identities = 169/406 (41%), Positives = 253/406 (62%), Gaps = 6/406 (1%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +D L++L ERGFI Q ++ + L+   S G  + Y+G D T  SLH GH+  L  +  LQ+
Sbjct: 2   ADALTVLRERGFIQQCTDEKGLETALSSGPNSFYVGVDPTGISLHVGHMVPLFAMAHLQR 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++++GGGT++IGDPS + E R++   + IQ+N E IK      + +  GK  A +
Sbjct: 62  AGHKPLAVVGGGTALIGDPSGKTEMRKIQSVETIQKNAEAIKKQIGRIVDFSDGK--AKL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           LNN  WL ++ YI+ LR+IG  FSVNRML+FES + RL  E  LSF+EFNY +LQ+YDF 
Sbjct: 120 LNNYDWLANLNYIEFLRDIGRHFSVNRMLTFESYKKRL--ETGLSFIEFNYQLLQSYDFY 177

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L ++ +C  Q+GG DQWGNI+ G++L  R+   ++F LT PL+T + G KMGKT  GA+
Sbjct: 178 VLNRDENCLFQIGGDDQWGNIVAGVELIRRMSGNEVFGLTFPLVTRSDGKKMGKTEKGAV 237

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
           +L+  +  P+ ++QYWRNI DADV  F    T LP+ E+  + +L+G E+N AK+I+A E
Sbjct: 238 FLDPNLFPPFEYYQYWRNIADADVEKFLMLFTFLPVEEVRELGRLEGSELNRAKEILAYE 297

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQH--MPTISISKDEVSRGMGLLTLIVKAGFAT 363
            T ++HG++EA+KA  AA   F     S    +P I +  +++  G+G+L L       +
Sbjct: 298 QTKLIHGKDEADKARDAAKAAFSAGGASDRGAIPFIELPNEDLEEGIGILELFAMTTLCS 357

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
           S +EARR ++     IN+  I + +  +  +  D  G + L  GKK
Sbjct: 358 SRSEARRLVQQGGAVINDEKIDDIEAIVTNKQLDDDGELLLRAGKK 403


>gi|323140411|ref|ZP_08075340.1| tyrosine--tRNA ligase [Phascolarctobacterium sp. YIT 12067]
 gi|322415096|gb|EFY05886.1| tyrosine--tRNA ligase [Phascolarctobacterium sp. YIT 12067]
          Length = 407

 Score =  330 bits (845), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 164/408 (40%), Positives = 254/408 (62%), Gaps = 15/408 (3%)

Query: 10  SILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
            +L ERGFI Q+S+  E+  L  +  +T YIG+D TA SLH GH   LM++  +Q+ GH+
Sbjct: 5   DVLMERGFIKQMSHEDEIKELLEKEKITFYIGFDPTADSLHVGHFIALMMMSHMQRAGHR 64

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
           PI L+GGGT ++GDPS +DE R+M+  + I  NI   K   S FI +G  K  A+++NN 
Sbjct: 65  PIVLLGGGTGMVGDPSGKDEMRKMLTPEFIAHNIACFKKQMSRFIDFGEDK--AIIVNNA 122

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
            WL  + Y+ LLRE+G  F+VNRML+ E  + R   E+ L+F EFNYMI+Q YDF +L  
Sbjct: 123 DWLLDLNYVQLLREVGVHFTVNRMLAAECFKKRW--EKGLTFFEFNYMIMQGYDFWKLHH 180

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
           +++C +++GG DQW N++ G++L  R      + +T  LLTT+ G KMGKT  GA+WL+ 
Sbjct: 181 DHNCIMELGGDDQWSNMLAGVELIRRKDQKPAYCMTCKLLTTSDGRKMGKTEKGALWLDP 240

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTM 309
           E TSPY+F+QYWRN+ D+DV +    LT LPM E+ R++ L+   INEAKK++A E+T +
Sbjct: 241 EKTSPYDFYQYWRNVADSDVENCLSLLTFLPMDEVRRLSALKDAAINEAKKVLAYEVTKL 300

Query: 310 VHGREEAEKAATAAMECF-----DMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           VHG E A +A  A    F     DMS    ++P I I+ ++++    ++ ++  A   +S
Sbjct: 301 VHGEEAARQAQEATEALFGGNAKDMS----NVPAIEITSEDMT--AKIIDVLTAAKVFSS 354

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
             EAR+ +    + + ++++ + +  +    FD+  ++ +  GKK + 
Sbjct: 355 KREARQLIAQGGLTVADTVLQDAEACLSADMFDADKSLLIRKGKKKYF 402


>gi|288574419|ref|ZP_06392776.1| tyrosyl-tRNA synthetase [Dethiosulfovibrio peptidovorans DSM 11002]
 gi|288570160|gb|EFC91717.1| tyrosyl-tRNA synthetase [Dethiosulfovibrio peptidovorans DSM 11002]
          Length = 441

 Score =  329 bits (843), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 169/422 (40%), Positives = 261/422 (61%), Gaps = 19/422 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D L +L +RG+I   S+P EL+ L  +  VTAY+G+D TA SLH GHL  LM L WLQK 
Sbjct: 19  DALKVLRDRGYIDWCSHPEELEELFREDRVTAYVGFDPTADSLHVGHLIPLMGLAWLQKL 78

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+P+ L GGGT +IGDPS + + R ++  ++I++N+E +K   S F+ + +G   AL++
Sbjct: 79  GHRPVVLAGGGTGMIGDPSGKSKERNLLSIEQIRKNVEAVKKQLSHFVSFDSGDNSALLV 138

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL-KREQSLSFLEFNYMILQAYDFV 185
           NN  WL S+ +++ LR++G  F+VN M++ E V+SRL   E+S+SF EF+Y +LQAYDF+
Sbjct: 139 NNYDWLNSMTFLEFLRDVGKHFTVNYMVAKEHVKSRLGDPEKSISFTEFSYTLLQAYDFL 198

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L + Y C+LQMGG+DQ GNI+ GIDL  +    +++  T+PLL T+SGTK GKT  GA+
Sbjct: 199 HLYRTYGCKLQMGGNDQQGNIVSGIDLIRKTDGAQVYGGTNPLLLTSSGTKFGKTEGGAV 258

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKKIIA 303
           WL++  TSPY F+Q+W N +D  V    K  T L + +I  + +      E  EA+KI+A
Sbjct: 259 WLDRAKTSPYRFYQFWVNSEDQAVEKLLKLFTFLSLEKISEIMEEHSVSPERREAQKILA 318

Query: 304 TEITTMVHGREEAEKAATAAMECFD------------MSIHSQHMPTISISKDEVSRGMG 351
            E+T++VHG++ AE A  A+   F             M + +  +P   +   ++SR   
Sbjct: 319 MELTSLVHGKDRAETARRASEILFGGAFDPVELSSEMMKVLAAEVPYFEVG--DISR--P 374

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           L+ ++V +  ++S  EARR +K   + +N + IS+E++++        G + L  GKK  
Sbjct: 375 LIDIMVDSAVSSSKGEARRLIKGGGVSVNGNRISDERMELDGSWLLQEGYLFLKVGKKKF 434

Query: 412 II 413
            +
Sbjct: 435 FV 436


>gi|325971776|ref|YP_004247967.1| tyrosyl-tRNA synthetase [Spirochaeta sp. Buddy]
 gi|324027014|gb|ADY13773.1| Tyrosyl-tRNA synthetase [Spirochaeta sp. Buddy]
          Length = 418

 Score =  328 bits (840), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 176/414 (42%), Positives = 248/414 (59%), Gaps = 15/414 (3%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L  L +RGFI   ++   L  L  +  VT Y+G D T  SLH GH+     +  LQK GH
Sbjct: 5   LQTLMDRGFIKACTDYDALSDLMDKEKVTFYVGADPTGRSLHIGHMVPFFAMHHLQKAGH 64

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY------GTGKTD 122
            PI+L+GGGT++IGDPS R E R+M+  +++ EN + IK    + + +      G GK  
Sbjct: 65  NPIALVGGGTAMIGDPSGRTEMRKMLTPEQVTENCKSIKAQLGTVVDFTEHPQEGMGK-- 122

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
           A+MLNN  WL  + YI  LREIG  FSVNRML+FES + RL+R   LSF+EFNY +LQ+Y
Sbjct: 123 AIMLNNADWLTDLNYITFLREIGRHFSVNRMLTFESYKQRLER--GLSFIEFNYQLLQSY 180

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DF  L + + CRLQ+GG DQWGNI+ GI+L  R+   + + LT  L+T + G KMGK+  
Sbjct: 181 DFYVLNQEHGCRLQIGGDDQWGNIVSGIELIRRMNGAECYGLTFNLITRSDGHKMGKSEK 240

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKII 302
           GA++L+ E+ S Y+F+QYWRN++D DV+ F K  T LP+ EI +  K     IN+AK+ +
Sbjct: 241 GAVFLDPELFSAYDFYQYWRNVNDDDVIKFLKLFTFLPLEEIAQYEKAD-VNINDAKERL 299

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQH----MPTISISKDEVSRGMGLLTLIVK 358
           A E T ++HG EEAEKA  AA   F  +   Q     MP+++I+  E+  G+ +L L  +
Sbjct: 300 AYEQTKIIHGVEEAEKARIAAKTMFKGANLGQEGRDGMPSLAIAASELENGIPVLDLFSR 359

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
              A + ++ARR +   A  I  + I + K  I     D  G + L  GKK + 
Sbjct: 360 TDLAATNSDARRLVAGGAAWIGETKIEDPKTLIDKTYLDGFGEMILRAGKKRYF 413


>gi|116750003|ref|YP_846690.1| tyrosyl-tRNA synthetase [Syntrophobacter fumaroxidans MPOB]
 gi|116699067|gb|ABK18255.1| tyrosyl-tRNA synthetase [Syntrophobacter fumaroxidans MPOB]
          Length = 435

 Score =  328 bits (840), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 181/420 (43%), Positives = 255/420 (60%), Gaps = 23/420 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +   +L+ERGF+ Q S+   L     +   + YIG+D TA SLH G +  +M L  +Q+ 
Sbjct: 13  NVFDVLNERGFVAQASDVEALRERLGR-PTSCYIGFDPTADSLHIGSMVPIMALAHMQRC 71

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+P+ L+GGGT ++GDPS + E RRM+ +++I+ N++ +K   S F+++G GK  ALML
Sbjct: 72  GHRPLVLVGGGTGLVGDPSGKTEMRRMLTAEQIRGNVDALKAQLSRFLEFGDGK--ALML 129

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  ++YI+ LR+IG  FSVNRML+ ES + RL  E  L+F+EFNYM+LQAYDF  
Sbjct: 130 NNADWLLDLRYIEFLRDIGRHFSVNRMLAAESYKMRL--ETGLNFIEFNYMLLQAYDFYH 187

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           LA+ YDC LQMGG+DQWGNI+ GI+L  R    +  A+T PLLTTASG KMGKT +GA+W
Sbjct: 188 LAEEYDCVLQMGGNDQWGNIVAGIELIRRKSGREAHAITFPLLTTASGAKMGKTAAGAVW 247

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           L+   TSP++++QYW N DD DVV F K  T LP+ EI  +  LQG+E+N AK ++A E 
Sbjct: 248 LSASRTSPFDYYQYWINTDDRDVVRFLKLYTFLPLLEIAAVEGLQGQELNAAKTVLAYEA 307

Query: 307 TTMVHGREEAEKAATAAMECF-----------------DMSIHSQHMPTISISKDEVSRG 349
           T + HGRE A  A  AA   F                 D+   +Q +PT  + +  +  G
Sbjct: 308 TLLTHGRENALAACEAASGVFGRRRLAPDLLPSSGIPRDVRDETQAVPTTDVERHRLEEG 367

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
           +    L  + G   S + ARR ++     +N+  +    L+I +      G I L  GKK
Sbjct: 368 IPAFELFAETGLCESRSAARRLIQQGGAYVNDMRLREFDLRIGVSHLRHDG-ILLKAGKK 426


>gi|257457309|ref|ZP_05622480.1| tyrosyl-tRNA synthetase [Treponema vincentii ATCC 35580]
 gi|257445231|gb|EEV20303.1| tyrosyl-tRNA synthetase [Treponema vincentii ATCC 35580]
          Length = 406

 Score =  327 bits (839), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 176/404 (43%), Positives = 246/404 (60%), Gaps = 7/404 (1%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L  L +RGF  Q ++   L  L  +G VT YIG D T  SLH GHL     L  L+  GH
Sbjct: 5   LQTLIDRGFFQQCTDVEALSALMDKGPVTFYIGTDPTGGSLHIGHLVPQFALRHLRDAGH 64

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
             I+L+GGGT  IGDPS + E R+M+  +++ EN+EKIK     FI +  GKT A   NN
Sbjct: 65  IGIALLGGGTGRIGDPSGKTEMRKMLDYRQLDENVEKIKAQLDRFIGF-DGKT-AFPENN 122

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
           + WL  + YID LR+IGS FSVN+MLSFE+ + R+  E  LSFLEFNY +LQ+YDF+ L 
Sbjct: 123 KNWLADLNYIDFLRDIGSCFSVNKMLSFEAYKIRM--ETGLSFLEFNYQLLQSYDFLMLH 180

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
           + + C LQ+GG DQWGNI+ G+DL  R    ++F LT PL+T + G KMGK+  GA++L+
Sbjct: 181 QKHHCCLQIGGDDQWGNIVAGVDLVRRKTGDEVFGLTFPLITRSDGKKMGKSEKGALFLD 240

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITT 308
           KEMT  ++F+QYWRN+DDADV  F    T LP+ EIDR+       INEAK+ +A E+T 
Sbjct: 241 KEMTPVFDFFQYWRNVDDADVRRFMLLFTFLPIEEIDRIC---AGNINEAKERLAWEVTK 297

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
            +HG++EA+ A   A   F        MPT+ +++    +G+ ++ L V++G   + ++A
Sbjct: 298 EIHGKDEADTALAGAKAAFGGGGDKSAMPTVEMNRAVFEQGIPVVDLFVQSGLCATKSDA 357

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           RR ++          +++ K  I     D TG + L  GKK  I
Sbjct: 358 RRLIEQGGALAAGQPVTDFKAVITAAVLDKTGELILRAGKKRFI 401


>gi|218781459|ref|YP_002432777.1| tyrosyl-tRNA synthetase [Desulfatibacillum alkenivorans AK-01]
 gi|254783593|sp|B8FGS9|SYY_DESAA RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|218762843|gb|ACL05309.1| Tyrosyl-tRNA synthetase [Desulfatibacillum alkenivorans AK-01]
          Length = 430

 Score =  327 bits (839), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 184/425 (43%), Positives = 251/425 (59%), Gaps = 22/425 (5%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           K + L  L ERGFI Q ++ +EL+ L S   V+ YIG+D TASSLH G L  +M L  +Q
Sbjct: 2   KMNVLQTLKERGFIEQTTHDQELEDLLSGEQVSCYIGFDPTASSLHVGSLVPIMSLAHMQ 61

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + GH+PI+L+GGGT ++GDPS + E R+++  +++  N E I+   + FI +  G   A+
Sbjct: 62  RAGHRPIALVGGGTGLVGDPSGKTEMRKLLTLEDVNNNAEGIRAQLARFIDFDKG---AV 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
             NN  WL  +KYI+ LR+ G  FSVNRM+  ES R RL+ E+ LSF+EFNYM+LQAYDF
Sbjct: 119 QENNANWLVGLKYIEFLRDFGRHFSVNRMIKAESYRMRLESEEGLSFIEFNYMLLQAYDF 178

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           + L   Y C+LQMGGSDQWGNI+ GIDL  R K    + +T PL+TT++G KMGKT  GA
Sbjct: 179 LHLFNEYGCQLQMGGSDQWGNIVAGIDLIRRAKGGSAYGITFPLITTSAGIKMGKTHKGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WL+ E TSPY ++Q+W N  D DV  F    T LPM +I+++  L G E+N AK I+A 
Sbjct: 239 VWLDPERTSPYEYFQFWVNTHDDDVPRFLALFTFLPMEQINKVKDLDGAELNLAKTILAF 298

Query: 305 EITTMVHGREEAEKAATAAMECF-----------DMSIHSQ-------HMPTISISKDEV 346
           E TT+ HGR++A  A  AA   F           D SI  +        +PT  + +  +
Sbjct: 299 EATTLAHGRDQAVGALEAAYNMFGAREIPADLLADSSIPREGAAKAEDSVPTTVMEQARL 358

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
             G+    L  + G   S   ARR L      +NN  I +   +I L D      I L  
Sbjct: 359 QEGVPAFELFDEIGLCASRGAARRLLGQGGGYVNNERIDSFDYKISLVDMKDN-EIILRA 417

Query: 407 GKKNH 411
           GKKN+
Sbjct: 418 GKKNY 422


>gi|313904038|ref|ZP_07837418.1| tyrosyl-tRNA synthetase [Eubacterium cellulosolvens 6]
 gi|313471187|gb|EFR66509.1| tyrosyl-tRNA synthetase [Eubacterium cellulosolvens 6]
          Length = 410

 Score =  326 bits (836), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 164/392 (41%), Positives = 248/392 (63%), Gaps = 7/392 (1%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG + Q+++ +E+  L + G  T YIG+D TA SLH GH   L+L+  LQ  G+KPI
Sbjct: 7   LQARGLLAQLTDEKEIAELINAGKATFYIGFDPTADSLHVGHFMALLLMKRLQAAGNKPI 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GGGT++IGDPS R + R+MM  + I  N+E  K   S FI +G  K  ALM+NN  W
Sbjct: 67  ALVGGGTAMIGDPSGRSDMRQMMTVETIDHNVECFKKQMSRFIDFGPDK--ALMVNNGDW 124

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L  + ++D +R+ GS F+VN ML      +R+  ++ LSFLEF+YM++Q+YDF  L  +Y
Sbjct: 125 LRDLNFLDFMRDYGSQFNVNEMLRARCYVNRM--QEGLSFLEFSYMLMQSYDFYRLYHDY 182

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
            C++Q GG DQW N++ GI+L  +      +A+T  LL    GTKMGKT  GA+WL+ + 
Sbjct: 183 GCQMQFGGDDQWSNMLGGINLIRKKDQKDAYAMTISLLLKHDGTKMGKTAGGAVWLDPDK 242

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVH 311
            SPY+F+QYWRN+DD+DV+ F + +T LP+ +ID M K +G ++N AK+I+A E+TT+VH
Sbjct: 243 YSPYDFYQYWRNVDDSDVLKFLRMMTFLPLEQIDEMDKWEGAQLNTAKEILAHELTTLVH 302

Query: 312 GREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG--MGLLTLIVKAGFATSTNEAR 369
           G +EA KA   A   F  S    ++P++ +  ++ +    + +L+++VK     S +EAR
Sbjct: 303 GEDEAVKAEAGAKAVFLGSGSLDNVPSVELEAEDFNENDEIDILSVLVKTAQCASRSEAR 362

Query: 370 RHL-KSNAIKINNSIISNEKLQIKLQDFDSTG 400
           R + K ++I I  + I +    IK  D  + G
Sbjct: 363 RAVTKDHSISIGENKIDDFAYAIKKADIPAEG 394


>gi|227498531|ref|ZP_03928675.1| tyrosyl-tRNA synthetase [Acidaminococcus sp. D21]
 gi|226903987|gb|EEH89905.1| tyrosyl-tRNA synthetase [Acidaminococcus sp. D21]
          Length = 408

 Score =  326 bits (836), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 172/403 (42%), Positives = 247/403 (61%), Gaps = 4/403 (0%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           +  L ERG++ Q+S+  E+  L  +  +T YIG+D TA SLH GH   LM++  +Q+ GH
Sbjct: 4   IDTLKERGYLKQLSHEEEIKELLEKEKITFYIGFDPTADSLHVGHFIALMVMAHMQRAGH 63

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           +PI LMGGGT +IGDPS ++E R+M+  + I  N+E  K     FI    GK  A++ +N
Sbjct: 64  RPIILMGGGTGMIGDPSGKNEMRKMLTPEFIHHNVECFKKQVGRFIDLSDGK--AIVADN 121

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL  + YI  LRE+G  FSVNRML  E  ++RL  E  LSF E NYMI+QAYDF  L 
Sbjct: 122 ANWLLGLNYIKFLREVGVHFSVNRMLGAECYKNRLASENGLSFFEMNYMIMQAYDFYVLH 181

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
           K Y+C +++GG DQW N+I G++L  R      F +T+ LLT + G KMGKT+ GA+WL+
Sbjct: 182 KKYNCVMELGGDDQWSNMIAGVELIRRKDRQPAFCMTNTLLTNSQGQKMGKTVGGAVWLS 241

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITT 308
            E TSP++F+QYWRN+DDADV      LT LPM E+ R+  L+G +INEAK  +A E+T 
Sbjct: 242 AEKTSPFDFYQYWRNVDDADVEKCLALLTFLPMDEVRRLGALEGSKINEAKVTLAYEVTK 301

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
           +VHG+EEA+KA  AA   F       + P + +S+ +   G  LL L+  A    S +E 
Sbjct: 302 LVHGKEEADKAKAAAEALFGAGGDMGNAPVVEVSRAQF--GSPLLDLLFDAKIIASKSEG 359

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           RR ++ N + + ++ +++    +    F+    + L  GKK +
Sbjct: 360 RRLIQQNGLTVGDTKVTDVAAALSETLFEGKTEVLLRKGKKKY 402


>gi|313888608|ref|ZP_07822273.1| tyrosine--tRNA ligase [Peptoniphilus harei ACS-146-V-Sch2b]
 gi|312845337|gb|EFR32733.1| tyrosine--tRNA ligase [Peptoniphilus harei ACS-146-V-Sch2b]
          Length = 424

 Score =  326 bits (835), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 163/409 (39%), Positives = 250/409 (61%), Gaps = 5/409 (1%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           +  F  +   ILSERG++ Q +   EL  +  +  V  YIG+D TA SL  GH  Q+ ++
Sbjct: 13  LEEFMENVFDILSERGYLDQCTYEDELREMLGKESVPFYIGFDATADSLTLGHFIQIRVM 72

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             +Q  GH PI+L+GGGT+ IGDPS + + R +M  + I  N  + K   SSF+ +  GK
Sbjct: 73  QHMQNAGHVPIALLGGGTTTIGDPSGKSDMRSLMNRETIDYNARRFKEQISSFLDFSDGK 132

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               + NN  WL  + +++ +REIG  FSVNRML F+  ++R+  EQ L+F EF+YM++Q
Sbjct: 133 --GYIENNADWLTKLNFLEFVREIGIHFSVNRMLQFDCYKNRM--EQGLTFFEFSYMLMQ 188

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           +YD++ L + + C+L++GGSDQW NI+ G +L  +L+  K++A+T  LLTTA+G KMGKT
Sbjct: 189 SYDYLYLYRKHGCKLEVGGSDQWSNILGGYELVRKLEGDKVYAMTFKLLTTAAGIKMGKT 248

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           ++GAIWL+ E T+PY  +QY RN DD DV+ F K LT LP+ +I    KL+G EIN+AK+
Sbjct: 249 MAGAIWLDPEKTTPYEMFQYLRNCDDRDVIKFMKLLTMLPLDKIAEYEKLEGAEINKAKE 308

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           ++A E+   +HG E A+ A  A+   F     S+ +P       +    +G+L L+ +  
Sbjct: 309 VLAYEVVKDIHGEEAAKAALDASHSLFGGDKASEDIPATEFEAAKFDEPVGILNLMTELR 368

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
              + +E RR +    + I++  I++ KL+I   +F   G I +  GKK
Sbjct: 369 LIKTNSEGRRLITQGGVSIDDEKITDPKLEITKDNF-KDGEIIIRKGKK 416


>gi|167751455|ref|ZP_02423582.1| hypothetical protein EUBSIR_02451 [Eubacterium siraeum DSM 15702]
 gi|167655701|gb|EDR99830.1| hypothetical protein EUBSIR_02451 [Eubacterium siraeum DSM 15702]
          Length = 404

 Score =  325 bits (833), Expect = 9e-87,   Method: Compositional matrix adjust.
 Identities = 176/398 (44%), Positives = 252/398 (63%), Gaps = 5/398 (1%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L ERG I Q++N  E+  + ++G  T YIG+D TA SLH GH   L L+  LQ  G+KPI
Sbjct: 7   LIERGLIAQVTNEEEISKMINEGKATFYIGFDPTADSLHVGHFMALCLMKRLQMAGNKPI 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GGGT +IGDPS + + R+M+  ++I+ NI   K   S FI +  GK  AL++NN  W
Sbjct: 67  ALLGGGTGMIGDPSGKTDMRKMLTKEDIEHNIACFKKQMSRFIDFSDGK--ALLVNNADW 124

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L S+ Y+D+LRE+G+ FSVN+MLS E  + R++R   LSFLEFNYMI+Q+YDF +L K+Y
Sbjct: 125 LLSLNYVDVLREVGACFSVNKMLSAECYKQRMER--GLSFLEFNYMIMQSYDFYKLYKDY 182

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
            C +Q GG DQW N++ G +L  +       A+T  LL  + G KMGKT  GA+WL+ E 
Sbjct: 183 GCNMQFGGDDQWSNMLGGTELIRKKLGKDAHAMTITLLLNSEGKKMGKTEKGAVWLDPEK 242

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVH 311
           TSP+ F+QYWRN+ DADV+   K LT LP+ +I  M   +G ++N+AK+I+A E+T +VH
Sbjct: 243 TSPFEFFQYWRNVADADVMKCIKMLTFLPLEQIREMESWEGAQLNKAKEILAYELTKLVH 302

Query: 312 GREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTNEARR 370
           G EEAEKA  AA E F     S  MPT  +  + V+ G +G+L  +V +    S  EAR 
Sbjct: 303 GEEEAEKALAAAKELFGGKGVSGDMPTAVMPAELVNDGKIGILDALVASKLCPSKREART 362

Query: 371 HLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGK 408
           ++    I +N+  +++    I++ +F      K S+ K
Sbjct: 363 NVTGGGISVNDEKVTDPAAMIEIGEFAVIKKGKKSYCK 400


>gi|308271963|emb|CBX28571.1| Tyrosyl-tRNA synthetase [uncultured Desulfobacterium sp.]
          Length = 436

 Score =  324 bits (830), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 175/397 (44%), Positives = 242/397 (60%), Gaps = 20/397 (5%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +D ++I  ERGFI + ++  EL        +T YIG+D TASSLH G L  +M L  +QK
Sbjct: 9   ADLINIFEERGFIEKTTHDEELKDYIRNNKITCYIGFDPTASSLHVGSLIPIMALAHMQK 68

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+PI+L+GGGT +IGDPS + E R+++  + I+ N+  IK   S FI +   K  AL+
Sbjct: 69  NGHRPIALIGGGTGLIGDPSGKTEMRKLLNPEMIEANLSGIKKQLSRFIDFSDNK--ALL 126

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  WL  +KYI  LR+IG  FSVNRM+  ES + RL  E+ L+F+EFNYM+LQAYDF+
Sbjct: 127 VNNNEWLSELKYIPFLRDIGKCFSVNRMIKAESYKLRLDSEEGLNFIEFNYMLLQAYDFL 186

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           EL   Y CRLQMGGSDQWGNI+ GI+L  ++K    F +T PL+ T++G KMGKT  GA+
Sbjct: 187 ELFDKYKCRLQMGGSDQWGNIVAGIELIRKVKKDISFGITFPLIKTSNGAKMGKTAKGAV 246

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
           WL+ + TSPY+++QYW N DD DV  F    T LP+ EI  + KL+G ++N AK ++A E
Sbjct: 247 WLDSDRTSPYDYYQYWINTDDRDVARFLALFTFLPIEEIKDIEKLEGADLNSAKTVLAFE 306

Query: 306 ITTMVHGREEAEKAATAAMECF-------DMSIHSQ-----------HMPTISISKDEVS 347
            T + HGR+EA KA  AA   F       D  +HS             +P   I++D + 
Sbjct: 307 TTLLAHGRDEAVKAYQAAASVFGERFVPEDYLMHSTVPRNSSKAEDISVPCSYINQDVLK 366

Query: 348 RGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSII 384
            G+    L  +A    S   ARR ++     +N+  I
Sbjct: 367 LGIPAFKLFHEAKLTVSGAAARRLIEQGGAYVNDRRI 403


>gi|323485671|ref|ZP_08091009.1| hypothetical protein HMPREF9474_02760 [Clostridium symbiosum
           WAL-14163]
 gi|323401021|gb|EGA93381.1| hypothetical protein HMPREF9474_02760 [Clostridium symbiosum
           WAL-14163]
          Length = 411

 Score =  324 bits (830), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 174/400 (43%), Positives = 252/400 (63%), Gaps = 7/400 (1%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I Q++N  E+  + ++G  T YIG+D TA SLH GH   L L+  LQ  G+KPI
Sbjct: 7   LVARGLIAQVTNEEEIGNMINEGKATFYIGFDPTADSLHVGHFMALCLMKRLQMAGNKPI 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GGGT +IGDPS R++ R+MM  + IQ N +  K   S FI +  GK  A+M+NN  W
Sbjct: 67  ALLGGGTGMIGDPSGRNDLRQMMTVETIQHNCDCFKQQMSRFIDFSEGK--AMMVNNAEW 124

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L  + Y++LLRE+G  FSVNRML+ E  + R+  E+ L+FLEFNYMI+Q+YDF  L + Y
Sbjct: 125 LMGLNYVELLREVGPHFSVNRMLAAECYKQRM--EKGLTFLEFNYMIMQSYDFYMLFQKY 182

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
            C +Q GG DQW N++ G +L  R       A+T  LL  + G KMGKT SGA+WL+   
Sbjct: 183 GCNMQFGGDDQWSNMLGGTELIRRKLGKDAHAMTITLLLNSEGKKMGKTQSGAVWLDPNK 242

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVH 311
           TSP+ F+QYWRNI DADV+   + LT LP+ +I+ M K +G ++N AK+I+A E+T +VH
Sbjct: 243 TSPFEFYQYWRNIADADVLKCLRMLTFLPIEQINEMDKWEGSQLNTAKEILAFELTNLVH 302

Query: 312 GREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTNEARR 370
           G  EAEKA  A+   F  S ++  MPT  +++++ +   + +LT++ K+G A S +EARR
Sbjct: 303 GEAEAEKAKEASRALF-TSGNAADMPTAELTEEDFNGDEIDILTILQKSGLAPSRSEARR 361

Query: 371 HLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
           +++   + ++   + + K           G I +  GKKN
Sbjct: 362 NVEQGGVAVDGEAVKDSKAVFTKAQLSGDG-IVVKRGKKN 400


>gi|297587828|ref|ZP_06946472.1| tyrosine--tRNA ligase [Finegoldia magna ATCC 53516]
 gi|297574517|gb|EFH93237.1| tyrosine--tRNA ligase [Finegoldia magna ATCC 53516]
          Length = 415

 Score =  324 bits (830), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 166/387 (42%), Positives = 246/387 (63%), Gaps = 4/387 (1%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG+  Q +   EL  L  +  V  YIG+D TA SL  GH  QLM++  +Q  GH PI
Sbjct: 15  LVARGYFEQATYEDELRDLLGKERVPFYIGFDATADSLTIGHFIQLMVMMRMQAHGHIPI 74

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+GGGT++IGDPS R++ R +M  + I EN  +     + FI +G  K  A + NN+ W
Sbjct: 75  CLLGGGTTMIGDPSGRNDMRSIMTKEVIDENARRFYSQMTRFIDFGEDK--AYIENNKNW 132

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L ++ ++D +REIG  FSVN+ML+ ES ++R+K+   L+F EF+YM++Q+YD++ L + Y
Sbjct: 133 LLNLNFLDFMREIGVHFSVNQMLTLESYKNRMKK--GLTFFEFSYMLMQSYDYLVLYRKY 190

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
            C+LQMGGSDQW NI+ G DL  +L+  K++A+T  LLTTA G KMGK+  GA+WL++  
Sbjct: 191 GCKLQMGGSDQWSNILGGYDLVRKLENDKVYAMTFKLLTTADGVKMGKSQKGAVWLDENK 250

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVH 311
           T+PY+ +QY RN+DD DV  F   LT LP  E  R+  L+G +IN+AK+++A E+  +VH
Sbjct: 251 TTPYDLFQYMRNVDDRDVEKFLLMLTFLPTEECKRLGSLEGSDINKAKEVLAFEVCKLVH 310

Query: 312 GREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRH 371
           G E+AE+A   A   F+ +   ++MPT  +   +   G+GLL L+   G   S +EARR 
Sbjct: 311 GEEKAEEARQTANALFNSNAVDENMPTTEMKALDFENGIGLLNLLTMTGLTQSNSEARRL 370

Query: 372 LKSNAIKINNSIISNEKLQIKLQDFDS 398
           +  N I +N+   S+ K  + + DF+ 
Sbjct: 371 VTQNGISVNDKKESDPKRIVTIHDFND 397


>gi|291531956|emb|CBK97541.1| tyrosyl-tRNA synthetase [Eubacterium siraeum 70/3]
          Length = 404

 Score =  324 bits (830), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 175/398 (43%), Positives = 252/398 (63%), Gaps = 5/398 (1%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L ERG I Q++N  E+  + ++G  T YIG+D TA SLH GH   L L+  LQ  G+KPI
Sbjct: 7   LIERGLIAQVTNEEEISKMINEGKATFYIGFDPTADSLHVGHFMALCLMKRLQMAGNKPI 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GGGT +IGDPS + + R+M+  ++I+ NI   K   S FI +  GK  AL++NN  W
Sbjct: 67  ALLGGGTGMIGDPSGKTDMRKMLTKEDIEHNIACFKKQMSRFIDFSDGK--ALLVNNADW 124

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L S+ Y+D+LRE+G+ FSVN+MLS E  + R++R   LSFLEFNYMI+Q+YDF +L K+Y
Sbjct: 125 LLSLNYVDVLREVGACFSVNKMLSAECYKQRMER--GLSFLEFNYMIMQSYDFYKLYKDY 182

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
            C +Q GG DQW N++ G +L  +       A+T  LL  + G KMGKT  GA+WL+ E 
Sbjct: 183 GCNMQFGGDDQWSNMLGGTELIRKKLGKDAHAMTITLLLNSEGKKMGKTEKGAVWLDPEK 242

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVH 311
           TSP+ F+QYWRN+ DADV+   K LT LP+ +I  M   +G ++N+AK+++A E+T +VH
Sbjct: 243 TSPFEFFQYWRNVADADVMKCIKMLTFLPLEQIREMESWEGAQLNKAKEMLAYELTKLVH 302

Query: 312 GREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTNEARR 370
           G EEAEKA  AA E F     S  MPT  +  + V+ G +G+L  +V +    S  EAR 
Sbjct: 303 GEEEAEKALAAAKELFGGKGVSGDMPTAVMPAELVNDGKIGILDALVASKLCPSKREART 362

Query: 371 HLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGK 408
           ++    I +N+  +++    I++ +F      K S+ K
Sbjct: 363 NVTGGGISVNDEKVTDPAAMIEIGEFAVIKKGKKSYCK 400


>gi|291558304|emb|CBL35421.1| tyrosyl-tRNA synthetase [Eubacterium siraeum V10Sc8a]
          Length = 404

 Score =  323 bits (829), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 175/398 (43%), Positives = 252/398 (63%), Gaps = 5/398 (1%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L ERG I Q++N  E+  + ++G  T YIG+D TA SLH GH   L L+  LQ  G+KPI
Sbjct: 7   LIERGLIAQVTNEEEISKMINEGKATFYIGFDPTADSLHVGHFMALCLMKRLQMAGNKPI 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GGGT +IGDPS + + R+M+  ++I+ NI   K   S FI +  GK  AL++NN  W
Sbjct: 67  ALLGGGTGMIGDPSGKTDMRKMLTKEDIEHNIACFKKQMSRFIDFSDGK--ALLVNNADW 124

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L ++ Y+D+LRE+G+ FSVN+MLS E  + R++R   LSFLEFNYMI+Q+YDF +L K+Y
Sbjct: 125 LLNLNYVDVLREVGACFSVNKMLSAECYKQRMER--GLSFLEFNYMIMQSYDFYKLYKDY 182

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
            C +Q GG DQW N++ G +L  +       A+T  LL  + G KMGKT  GA+WL+ E 
Sbjct: 183 GCNMQFGGDDQWSNMLGGTELIRKKLGKDAHAMTITLLLNSEGKKMGKTEKGAVWLDPEK 242

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVH 311
           TSP+ F+QYWRN+ DADV+   K LT LP+ +I  M   +G ++N+AK+I+A E+T +VH
Sbjct: 243 TSPFEFFQYWRNVADADVMKCIKMLTFLPLEQIREMESWEGAQLNKAKEILAYELTKLVH 302

Query: 312 GREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTNEARR 370
           G EEAEKA  AA E F     S  MPT  +  + V+ G +G+L  +V +    S  EAR 
Sbjct: 303 GEEEAEKALAAAKELFGGKGVSGDMPTAVMPAELVNDGKIGILDALVASKLCPSKREART 362

Query: 371 HLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGK 408
           ++    I +N+  +++    I++ +F      K S+ K
Sbjct: 363 NVTGGGISVNDEKVTDPAAMIEIGEFAVIKKGKKSYCK 400


>gi|302387692|ref|YP_003823514.1| tyrosyl-tRNA synthetase [Clostridium saccharolyticum WM1]
 gi|302198320|gb|ADL05891.1| tyrosyl-tRNA synthetase [Clostridium saccharolyticum WM1]
          Length = 407

 Score =  323 bits (829), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 172/402 (42%), Positives = 254/402 (63%), Gaps = 7/402 (1%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I Q++N  E+  + ++G    YIG+D TA SLH GH   L L+  LQ+ G+KPI
Sbjct: 7   LKARGLIAQVTNEEEISKMVNEGKAVFYIGFDPTADSLHVGHFMALCLMKRLQEAGNKPI 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GGGT ++GDPS R + R++M  + IQ N +  K   S FI +  GK  ALM+NN  W
Sbjct: 67  ALIGGGTGMVGDPSGRSDLRQVMTVETIQHNCDCFKKQMSRFIDFSEGK--ALMVNNADW 124

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L ++ YID LRE+G  FSVNRML+ E  + R+  E+ LSFLEFNYMI+Q++DF EL   Y
Sbjct: 125 LLNLNYIDFLREVGPHFSVNRMLTAECYKQRM--EKGLSFLEFNYMIMQSFDFYELFNRY 182

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
            C +Q GG DQW N++ G +L  R       A+T  LL  + G KMGKT SGA+WL+ E 
Sbjct: 183 GCNMQFGGDDQWSNMLGGTELIRRKLGKDAHAMTITLLLNSEGNKMGKTQSGAVWLDPEK 242

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVH 311
           T+P++F+QYWRNI DADV+   + LT LP+ +I+ M   +G ++NEAK+I+A E+T +VH
Sbjct: 243 TTPFDFFQYWRNIADADVLKCLRMLTFLPIEQINEMDSWEGSQLNEAKEILAYELTNLVH 302

Query: 312 GREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTNEARR 370
           G EEAE+A  +A   F    ++  MPT  + + + + G + +L ++ K+G A + +EARR
Sbjct: 303 GEEEAERARESARALFTGG-NAADMPTCELEEADFTDGSIDILAILQKSGLAPTRSEARR 361

Query: 371 HLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           +++   + +    +S+ K  +  +D  S   + +  GKK  +
Sbjct: 362 NVEQGGVTVEGEAVSDGK-AVFTKDQLSGDGVVVKRGKKKFV 402


>gi|26554251|ref|NP_758185.1| tyrosyl-tRNA synthetase [Mycoplasma penetrans HF-2]
 gi|81747514|sp|Q8EUX2|SYY_MYCPE RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|26454260|dbj|BAC44589.1| tyrosyl-tRNA synthetase [Mycoplasma penetrans HF-2]
          Length = 411

 Score =  323 bits (829), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 181/408 (44%), Positives = 258/408 (63%), Gaps = 9/408 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + L  L +RG+I+Q SN   ++    +G  + YIG+D TA SLH GH   +M +  LQK 
Sbjct: 5   NILEFLKKRGYIYQGSNFDLIEKELIKGT-SFYIGFDPTADSLHVGHFLTMMAVKHLQKA 63

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           G+ P+ ++GGGT  +GDPS R E R+++  + I  N E +K   S FI +  GK  A+M+
Sbjct: 64  GNNPVIVVGGGTGSVGDPSGRSEIRKILDRKTIDYNCECLKKQMSKFISF-EGKNKAVMV 122

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  I +I+ LRE G  FSVN+ML+ E+ + R ++E  LSFLEFNYM++QAYDF  
Sbjct: 123 NNADWLLKINWIEFLREFGVCFSVNKMLAAEAFKVRFEQESGLSFLEFNYMLMQAYDFYY 182

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L +NY+  +Q+GGSDQW NI+ G+DL  R  + + FALT  LLT   GTKMGKT +GAIW
Sbjct: 183 LNQNYNVNIQLGGSDQWSNILAGVDLIRRKSSKEAFALTLNLLTKHDGTKMGKTATGAIW 242

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           L+K  TSPY F+QYW NIDD DV  F   LT L    I  + K +GK+I EAKK++A+E+
Sbjct: 243 LDKNKTSPYEFYQYWLNIDDQDVERFLLLLTELDDKTISDLCKEKGKKIVEAKKVLASEL 302

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
           T M+HG+EE +KA   +   F+ +  S ++PT  +   +++    +  ++V    + S  
Sbjct: 303 TKMIHGQEELDKAIEQSKAAFENA--SDNLPTYELKASDLNNDYSIANILVVTKLSPSKA 360

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDF--DSTGNIKLSFGKKNHI 412
           E+RR + SNA+ +N + I++  +  KL+D   D T N  L  GKKNHI
Sbjct: 361 ESRRLITSNAVSVNETKITD--VNTKLEDLKIDQT-NFTLHKGKKNHI 405


>gi|330836945|ref|YP_004411586.1| tyrosyl-tRNA synthetase [Spirochaeta coccoides DSM 17374]
 gi|329748848|gb|AEC02204.1| tyrosyl-tRNA synthetase [Spirochaeta coccoides DSM 17374]
          Length = 418

 Score =  323 bits (828), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 175/409 (42%), Positives = 246/409 (60%), Gaps = 11/409 (2%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L IL +RGFI   ++   L  L  +  VT Y+G D +  S+H GH+     +  +Q+ GH
Sbjct: 5   LQILHDRGFIKACTDSDALSDLMDKEPVTFYVGVDPSGRSIHIGHMVPFFAMHHMQEAGH 64

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG----TGKTDAL 124
            PI+L+GGGT +IGDPS + E R+M+  ++I  N   IK    + I +      G   A 
Sbjct: 65  NPIALVGGGTGMIGDPSGKTELRKMLTHEQIAANSASIKKQLGTVIDFAEMPPNGLGRAQ 124

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M+NN  WL  + YID LREIGS FSVNRML+FES + RL+R   LSF+EFNY +LQ+YDF
Sbjct: 125 MVNNADWLLGLNYIDFLREIGSQFSVNRMLTFESYKQRLER--GLSFIEFNYQLLQSYDF 182

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           + L + + CRLQMGG DQWGNI+ GIDL  R+++ + + LT  L+  A G KMGK+  GA
Sbjct: 183 LTLYRTHGCRLQMGGDDQWGNIVAGIDLIRRMESAECYGLTFNLIMRADGKKMGKSEKGA 242

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           ++L+ +M SPY+F+QYWRN++DADV  F K  T LP+ EID  AK  G  INE K+ +A 
Sbjct: 243 VFLDPDMYSPYDFYQYWRNVNDADVFKFMKLFTFLPLEEIDDYAK-PGVNINEVKERLAW 301

Query: 305 EITTMVHGREEAEKAATAAMECFDMS----IHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           E T ++HG+EEA+KA  AA   F  +       + MP++ I  D ++ G+  L L V++ 
Sbjct: 302 EQTRIIHGQEEADKARDAAKAAFGSTGANPAAREGMPSMEIPADRLASGIPALELFVESK 361

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
              S ++ RR +      +N + I +    I     D  G + L  GKK
Sbjct: 362 LVPSNSDGRRLIAGGGAHVNETKIESHDQVIDSSWRDEQGELILRSGKK 410


>gi|218133612|ref|ZP_03462416.1| hypothetical protein BACPEC_01481 [Bacteroides pectinophilus ATCC
           43243]
 gi|217990987|gb|EEC56993.1| hypothetical protein BACPEC_01481 [Bacteroides pectinophilus ATCC
           43243]
          Length = 407

 Score =  323 bits (828), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 174/399 (43%), Positives = 249/399 (62%), Gaps = 6/399 (1%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I Q+++  E+  L + G  T YIG+D TA SLH GH   L L+  LQ  G+KPI
Sbjct: 7   LVARGLIAQVTDEDEIKELINNGKATFYIGFDPTADSLHVGHFMALCLMKRLQMAGNKPI 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GGGT++IGDPS R + R+MM  + I  N+E  K   + FI +  GK  AL++NN  W
Sbjct: 67  ALIGGGTAMIGDPSGRTDMRQMMTVETINHNVECFKKQMARFIDFSDGK--ALLVNNADW 124

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L ++ Y+D+LRE+G  FSVNRML+ E  + R++R   LSFLEFNYMI+Q+YDF  L + Y
Sbjct: 125 LMNLNYVDVLREVGPHFSVNRMLTAECYKQRMER--GLSFLEFNYMIMQSYDFYMLYQKY 182

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
            C ++ GG DQW N++ G +L  R      +A+T  LL  + G KMGKT SGA+WL+   
Sbjct: 183 GCNMEFGGDDQWSNMLGGTELIRRKLGKDTYAMTINLLLNSEGKKMGKTQSGAVWLDANK 242

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVH 311
           T+PY F+QYWRN+ DADV+   K LT LP+ EI++M   +G ++N+AK+I+A E+T +VH
Sbjct: 243 TTPYEFYQYWRNVADADVIKCLKMLTFLPLEEIEKMESWEGSQLNKAKEILAYELTKLVH 302

Query: 312 GREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTNEARR 370
           G EEA+KA  AA   F     + +MP+  +   +   G + ++TL+ K G   S +EARR
Sbjct: 303 GEEEAQKADAAAKALFAGGGDTSNMPSTKLEDADFEDGAINIVTLVHKTGIVASRSEARR 362

Query: 371 HLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
            ++   I ++   I++    I    F   G + L  GKK
Sbjct: 363 AVEQGGITLDGEKIADINAVIAKDRFAGEG-LVLKKGKK 400


>gi|260587833|ref|ZP_05853746.1| tyrosine--tRNA ligase [Blautia hansenii DSM 20583]
 gi|260542098|gb|EEX22667.1| tyrosine--tRNA ligase [Blautia hansenii DSM 20583]
          Length = 406

 Score =  323 bits (827), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 179/400 (44%), Positives = 252/400 (63%), Gaps = 7/400 (1%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I Q+++  E+  L + G  T YIG+D TA SLH GH   L L+  LQ  G+KPI
Sbjct: 7   LVARGLIAQVTDEEEIRELINNGKATFYIGFDPTADSLHVGHFMALCLMKRLQMAGNKPI 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GGGT  IGDPS R + R MM  + IQ N +  K     FI +  GK  A+M+NN  W
Sbjct: 67  ALIGGGTGYIGDPSGRSDMRSMMTPEIIQHNCDCFKKQMERFIDFSEGK--AMMVNNADW 124

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L  + Y++LLRE+G  FSVNRML+ E  + R+  E+ LSFLEFNYMI+Q+YDF  L + Y
Sbjct: 125 LLDLNYVELLREVGPHFSVNRMLTAECYKQRM--EKGLSFLEFNYMIMQSYDFYMLYQKY 182

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
            C +Q GG DQW N++ G +L  R       A+T  LL  + G KMGKT SGA+WL+   
Sbjct: 183 GCNMQFGGDDQWSNMLGGTELIRRKLGENACAMTITLLLNSEGKKMGKTQSGAVWLDPNK 242

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVH 311
           TSP++F+QYWRN+ DADV+   + LT LP+ +ID M K +G ++N+AK+I+A E+T +VH
Sbjct: 243 TSPFDFYQYWRNVADADVLKCIRMLTFLPLEQIDEMDKWEGSQLNKAKEILAYELTALVH 302

Query: 312 GREEAEKAATAAMECFDMSIHSQHMPTISISK-DEVSRGMGLLTLIVKAGFATSTNEARR 370
           G+EEAEKA  AA   F  S ++ +MP+  I + D V   + L++L+ K+G A + +EARR
Sbjct: 303 GKEEAEKAQEAARALFS-SGNAANMPSAKIEEADLVDGNIDLISLLHKSGLANTRSEARR 361

Query: 371 HLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            ++   + I+   +++ K  +  +     G I L  GKKN
Sbjct: 362 AIEQGGVSIDGEKVTDIKHLVSGEKLQGDG-IVLKKGKKN 400


>gi|331083835|ref|ZP_08332944.1| tyrosyl-tRNA synthetase [Lachnospiraceae bacterium 6_1_63FAA]
 gi|330403260|gb|EGG82820.1| tyrosyl-tRNA synthetase [Lachnospiraceae bacterium 6_1_63FAA]
          Length = 406

 Score =  323 bits (827), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 179/400 (44%), Positives = 252/400 (63%), Gaps = 7/400 (1%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I Q+++  E+  L + G  T YIG+D TA SLH GH   L L+  LQ  G+KPI
Sbjct: 7   LVARGLIAQVTDEEEIRELINNGKATFYIGFDPTADSLHVGHFMALCLMKRLQMAGNKPI 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GGGT  IGDPS R + R MM  + IQ N +  K     FI +  GK  A+M+NN  W
Sbjct: 67  ALIGGGTGYIGDPSGRSDMRSMMTPEIIQHNCDCFKKQMERFIDFSEGK--AMMVNNADW 124

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L  + Y++LLRE+G  FSVNRML+ E  + R+  E+ LSFLEFNYMI+Q+YDF  L + Y
Sbjct: 125 LLDLNYVELLREVGPHFSVNRMLTAECYKQRM--EKGLSFLEFNYMIMQSYDFYMLYQKY 182

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
            C +Q GG DQW N++ G +L  R       A+T  LL  + G KMGKT SGA+WL+   
Sbjct: 183 GCNMQFGGDDQWSNMLGGTELIRRKLGKNACAMTITLLLNSEGKKMGKTQSGAVWLDPNK 242

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVH 311
           TSP++F+QYWRN+ DADV+   + LT LP+ +ID M K +G ++N+AK+I+A E+T +VH
Sbjct: 243 TSPFDFYQYWRNVADADVLKCIRMLTFLPLEQIDEMDKWEGSQLNKAKEILAYELTALVH 302

Query: 312 GREEAEKAATAAMECFDMSIHSQHMPTISISK-DEVSRGMGLLTLIVKAGFATSTNEARR 370
           G+EEAEKA  AA   F  S ++ +MP+  I + D V   + L++L+ K+G A + +EARR
Sbjct: 303 GKEEAEKAQEAARALFS-SGNAANMPSAKIEEADLVDGNIDLISLLHKSGLANTRSEARR 361

Query: 371 HLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            ++   + I+   +++ K  +  +     G I L  GKKN
Sbjct: 362 AIEQGGVAIDGEKVTDIKHLVSGEKLQGDG-IVLKKGKKN 400


>gi|332653332|ref|ZP_08419077.1| tyrosine--tRNA ligase [Ruminococcaceae bacterium D16]
 gi|332518478|gb|EGJ48081.1| tyrosine--tRNA ligase [Ruminococcaceae bacterium D16]
          Length = 407

 Score =  322 bits (825), Expect = 7e-86,   Method: Compositional matrix adjust.
 Identities = 171/399 (42%), Positives = 243/399 (60%), Gaps = 6/399 (1%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I Q++N  E+  + ++G    YIG+D TA SLH GH   L L+  LQ  G++PI
Sbjct: 7   LKARGLIAQVTNEEEISKMINEGKAVFYIGFDPTADSLHVGHFMALCLMKRLQMAGNRPI 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GGGT  IGDPS R + R MM  + IQ N +  K     FI++G GK  A M+NN  W
Sbjct: 67  ALIGGGTGYIGDPSGRTDMRSMMTPETIQHNCDCFKKQMERFIEFGEGK--AQMVNNADW 124

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L  + YIDLLR++G+ FSVN ML  +    R+  E+ LSFLEFNYMI+Q+YDF  L ++Y
Sbjct: 125 LLGLNYIDLLRDVGACFSVNNMLRAKCYEQRM--EKGLSFLEFNYMIMQSYDFYYLFQHY 182

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
            C +Q GG DQW N++ G +L  R       A+T  LL  + G KMGKT  GA+WL+   
Sbjct: 183 GCNMQFGGDDQWSNMLGGTELIRRKLGKDAHAMTITLLLNSEGKKMGKTAKGAVWLDPNK 242

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVH 311
           TSPY F+QYWRN+ D DV+   + LT LP+ +ID M K +G ++N AK+I+A E+T +VH
Sbjct: 243 TSPYEFYQYWRNVGDQDVLKCLRMLTFLPLEQIDEMDKWEGSQLNTAKEILAFELTKLVH 302

Query: 312 GREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTNEARR 370
           G EEA+KA  AA   F       ++PT +++ + ++ G +G+L ++V    A S  EARR
Sbjct: 303 GEEEAKKAQDAAKALFVGGGDMSNVPTTTLTAENLTDGSIGILDMMVTCKLAPSKKEARR 362

Query: 371 HLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
            ++   + +N+  +S+   +    D    G I +  GKK
Sbjct: 363 LVEQGGVTVNDEKVSDVNTRYTADDLSGDG-IMVRKGKK 400


>gi|160946158|ref|ZP_02093369.1| hypothetical protein PEPMIC_00120 [Parvimonas micra ATCC 33270]
 gi|158447681|gb|EDP24676.1| hypothetical protein PEPMIC_00120 [Parvimonas micra ATCC 33270]
          Length = 408

 Score =  321 bits (823), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 159/383 (41%), Positives = 245/383 (63%), Gaps = 5/383 (1%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG+  Q +   EL  L S+  V  YIG+D TA SL  GH  Q+M++  +Q  GH PI
Sbjct: 10  LVDRGYFEQATYEDELKELLSKERVKFYIGFDATADSLTIGHFIQIMVMKRMQNYGHIPI 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GGGT++IGDPS R + R +M  ++I  N ++     S FI +  G  +A++ NN+ W
Sbjct: 70  ALLGGGTTMIGDPSGRSDMRMVMTEEQINYNAKRFFEQLSRFIDFTDG--NAIIENNKDW 127

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L  + +I  ++E+G  FSVN+ML+ ++ ++R+  E+ L+F EF+YM++Q+YDF+ L + +
Sbjct: 128 LLDLNFIKFMKEVGVHFSVNKMLTCDAYKNRM--EKGLTFFEFSYMLMQSYDFLYLYRKH 185

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
            C+LQ+GGSDQW NI+ G DL  +L+  K++A+T  LLTTA G KMGK+  GA+WL++E 
Sbjct: 186 GCKLQLGGSDQWSNILGGYDLVRKLEQDKVYAMTFKLLTTADGVKMGKSQKGAVWLDEEK 245

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVH 311
           TSPY  +QY RN+DD DV  F   LT LP  +   + K + + INEAK+I+A E+T ++H
Sbjct: 246 TSPYELFQYMRNVDDRDVEKFLLMLTFLPTEKCRELGKYKDERINEAKEILAFEVTKIIH 305

Query: 312 GREEAEKAATAAMECFDMSIHSQHMPTISISK-DEVSRGMGLLTLIVKAGFATSTNEARR 370
           G E+A+KA   A   F   +  ++MP+  I K D  +  +G+L LI   G + S  EARR
Sbjct: 306 GEEKAQKALETARALFSGELLDENMPSTEIKKSDFENEEIGILDLIRTCGLSKSNGEARR 365

Query: 371 HLKSNAIKINNSIISNEKLQIKL 393
            ++   I +N   +++  L++ L
Sbjct: 366 LIEQGGISLNGEKVADTNLKVSL 388


>gi|238917062|ref|YP_002930579.1| tyrosyl-tRNA synthetase [Eubacterium eligens ATCC 27750]
 gi|238872422|gb|ACR72132.1| tyrosyl-tRNA synthetase [Eubacterium eligens ATCC 27750]
          Length = 447

 Score =  321 bits (823), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 170/402 (42%), Positives = 253/402 (62%), Gaps = 7/402 (1%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I Q+++   +  L + G  T YIG+D TA SLH GH   L L+  LQ  G+KPI
Sbjct: 47  LVARGLIAQVTDEALIKDLINNGKATFYIGFDPTADSLHVGHFMALCLMKRLQMAGNKPI 106

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GGGT++IGDPS R + R+M+  ++IQ N++  K   + FI +   K  AL++NN  W
Sbjct: 107 ALIGGGTAMIGDPSGRTDMRKMLTPEQIQHNVDCFKKQMARFIDFSDDK--ALLVNNADW 164

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L ++ Y++LLRE+G+ FSVN ML  E  + R+  E+ LSFLEFNYMI+Q+YDF  L + Y
Sbjct: 165 LLNLNYVELLREVGACFSVNNMLRAECYKQRM--EKGLSFLEFNYMIMQSYDFYMLYQKY 222

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
            C LQ GG+DQW N++ G +L  R       A+T  LL  + G KMGKT SGA+WL+ + 
Sbjct: 223 GCNLQFGGNDQWSNMLGGTELIRRKLDKDASAMTITLLLNSEGKKMGKTASGAVWLDPDK 282

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVH 311
           TSPY+F+QYWRN+DDADV+   + LT LP+ EID+M   +G ++N+AK+I+A E+T +VH
Sbjct: 283 TSPYDFYQYWRNVDDADVLKCIRMLTFLPLEEIDKMDSWEGAQLNKAKEILAYELTKLVH 342

Query: 312 GREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTNEARR 370
           G EEA+KA   A   F     + +MPT  +  D  +   +  + L+  AG AT+ +EARR
Sbjct: 343 GEEEAKKAEATAKAIF-TGGDAANMPTAKLEADSFTDDEIDAINLVFGAGLATTKSEARR 401

Query: 371 HLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
            ++   + ++   +++   +     F+  G + +  GKK+ +
Sbjct: 402 TIQQGGVSVDGEKVADIAAKFPKSMFEGDG-VVVKKGKKSFV 442


>gi|302670891|ref|YP_003830851.1| tyrosyl-tRNA synthetase TyrS [Butyrivibrio proteoclasticus B316]
 gi|302395364|gb|ADL34269.1| tyrosyl-tRNA synthetase TyrS [Butyrivibrio proteoclasticus B316]
          Length = 406

 Score =  320 bits (820), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 161/378 (42%), Positives = 237/378 (62%), Gaps = 5/378 (1%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I Q+++  ++  L + G  T YIG+D TA SL AGH   L L+  LQ  G+KPI
Sbjct: 7   LKARGLIAQVTDEEQIRELVNAGKATFYIGFDCTADSLTAGHFMALTLMKRLQMAGNKPI 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GGGT++IGDPS R + R+M+  ++I  N E  K     FI++G  K  A+M+NN  W
Sbjct: 67  ALIGGGTTMIGDPSGRTDMRKMLTREDIDHNAECFKRQMEKFIEFGDDK--AIMVNNADW 124

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L ++ YI+LLRE+G+ FSVN ML  E  + R+  E+ LSFLEFNYMI+Q+YDF  + + Y
Sbjct: 125 LMNLNYIELLREVGACFSVNNMLRAECYKQRM--EKGLSFLEFNYMIMQSYDFYYMFQKY 182

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
           +C L+ GG DQW N++ G +L  R       A+T  LLT + G KMGKT   A+WL+   
Sbjct: 183 NCNLEFGGDDQWSNMLGGTELIRRKLGKDAHAMTITLLTDSQGKKMGKTAGNAVWLDPNK 242

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVH 311
           TSP++F+QYWRN+ DADV    K LT +P+ EI  M K     INE K+I+A E+T++VH
Sbjct: 243 TSPFDFYQYWRNVGDADVDKCIKMLTFIPIEEILEMEKWDDSRINEKKEILAFELTSLVH 302

Query: 312 GREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTNEARR 370
           G+EEA+KA  AA   F       ++P +++ +++   G + +L ++V AG   + +EARR
Sbjct: 303 GKEEAQKAQDAARALFAGGGDMSNVPAVALKEEDFRDGVVDILQVLVSAGLCNTRSEARR 362

Query: 371 HLKSNAIKINNSIISNEK 388
            ++   +      +++ K
Sbjct: 363 AVEQGGVTFAEEKVTDVK 380


>gi|295100837|emb|CBK98382.1| tyrosyl-tRNA synthetase [Faecalibacterium prausnitzii L2-6]
          Length = 406

 Score =  320 bits (819), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 165/376 (43%), Positives = 242/376 (64%), Gaps = 7/376 (1%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG + QI++   +D++ + G  T YIG+D TA SL AGH   L L+  LQ  G+KPI
Sbjct: 7   LKARGLVAQITDDEIIDVI-NNGKATFYIGFDCTADSLTAGHFMALTLMKRLQMAGNKPI 65

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GGGT++IGDPS R + R+M+  ++I  N    K     FI +  GK  ALMLNN  W
Sbjct: 66  ALIGGGTTMIGDPSGRTDMRKMLTKEDIAHNAACFKKQMEKFIDFSDGK--ALMLNNADW 123

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L ++ Y++LLR++G+ FSVN ML  +    R+  E+ LSFLEFNYMI+Q+YDF  + ++Y
Sbjct: 124 LLNLNYVELLRDVGACFSVNNMLRAKCYEQRM--EKGLSFLEFNYMIMQSYDFYYMFQHY 181

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
            C +Q GG DQW N++ G +L  R      +A+T  LLT + G KMGKT   A+WL+   
Sbjct: 182 GCNMQFGGDDQWSNMLGGTELIRRKLGKDAYAMTITLLTDSQGKKMGKTAGNAVWLDPNK 241

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVH 311
           TSP+ F+QYWRN+ D+DV+   + LT LP+ +ID M+  + + +NEAK+I+A E+T MVH
Sbjct: 242 TSPFEFYQYWRNVGDSDVMKCIRMLTFLPLEQIDEMSTWKDQRLNEAKEILAFELTKMVH 301

Query: 312 GREEAEKAATAAMECFDMSI-HSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTNEAR 369
           G EEA KA  AA   F  +   ++HMP   +++ +++ G +G+LTL+VKAG A S  EAR
Sbjct: 302 GEEEAAKAQNAARALFSGAAGDAEHMPNTQLTEADLTDGSIGILTLMVKAGLAASNGEAR 361

Query: 370 RHLKSNAIKINNSIIS 385
           R +    + ++   ++
Sbjct: 362 RLVVQGGVLVDGEKVA 377


>gi|304440653|ref|ZP_07400537.1| tyrosine--tRNA ligase [Peptoniphilus duerdenii ATCC BAA-1640]
 gi|304370840|gb|EFM24462.1| tyrosine--tRNA ligase [Peptoniphilus duerdenii ATCC BAA-1640]
          Length = 427

 Score =  320 bits (819), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 166/407 (40%), Positives = 253/407 (62%), Gaps = 5/407 (1%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           K + + IL ERGFI Q+++  EL  L  +  V  YIG+D TA SL  GH  Q+ ++  +Q
Sbjct: 20  KMNVIDILEERGFIDQMTHEEELRDLLGKEKVKFYIGFDATADSLTLGHFLQIRVMQHMQ 79

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GH P++L+GGGT++IGDPS +++ R++M    I  N E  +   S F+ +  GK   +
Sbjct: 80  NAGHIPVALLGGGTTMIGDPSGKNDMRKVMTEDFINHNAECFRKQISHFLDFSEGK--GI 137

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           + NN+ WL  +K++  +REIG  FSVNRML+F+  ++R+  E  L+F EF YM++Q+YDF
Sbjct: 138 IENNKDWLLDLKFLPFMREIGVHFSVNRMLNFDCYKNRM--ENGLTFFEFGYMLMQSYDF 195

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           + L + +  +L++GGSDQW NII G +L  +L++  +F +T  LLTTASG KMGK+  GA
Sbjct: 196 LYLYRKHGVKLELGGSDQWSNIIGGYELVRKLESDLVFGMTFKLLTTASGQKMGKSEKGA 255

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           IWL++E TSPY  +QY RN DD DV+ F K LT LP+ +I    KL+G+E+N+AK+++A 
Sbjct: 256 IWLDREKTSPYEMFQYLRNSDDRDVIKFLKLLTMLPLEKIAEYEKLEGQELNKAKEVLAF 315

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E+   VHG E A++A  A+   F     S+++P   + +     G+G+L L+ K     S
Sbjct: 316 EVVKDVHGEEAAKEALEASKALFQGGADSENIPNEDMDRKIFEEGIGILDLMTKLNLTKS 375

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
            +EARR ++   + I+   + +  L +K   F     I +  GKK H
Sbjct: 376 NSEARRLIQGGGVSIDGEKVQDPNLVVKADMFKDD-KIIIQKGKKVH 421


>gi|42526373|ref|NP_971471.1| tyrosyl-tRNA synthetase [Treponema denticola ATCC 35405]
 gi|81570312|sp|Q73PD8|SYY_TREDE RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|41816485|gb|AAS11352.1| tyrosyl-tRNA synthetase [Treponema denticola ATCC 35405]
          Length = 406

 Score =  319 bits (818), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 170/401 (42%), Positives = 242/401 (60%), Gaps = 7/401 (1%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L IL ERGFI Q ++ + L     +G +  Y G D T  SLH GH+  +  L  L + GH
Sbjct: 5   LKILQERGFIQQCTDLQALSDRMDKGQIAFYTGTDPTGPSLHIGHMVPIFALKHLCREGH 64

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           K + L+GGGTS IGDPS + E R+M+   E+ +N   I+     F+       +   +NN
Sbjct: 65  KGVVLVGGGTSRIGDPSGKTEMRKMLSYDELDKNAASIQKQIEKFLAKDI--KNVRFVNN 122

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
           + WL  + YID LR+IGS FSVN+MLSFE+ + R+  E  LSFLEFNY +LQ+YDF+ L 
Sbjct: 123 KDWLADLNYIDFLRDIGSHFSVNKMLSFEAYKKRM--ETGLSFLEFNYQLLQSYDFLMLN 180

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
           +NY+  LQ+GG DQWGN++ G DL  R    ++FALT  L+T A G KMGK+  GAI+L+
Sbjct: 181 QNYNIELQIGGDDQWGNMVAGSDLIRRKGGGEVFALTFSLVTRADGQKMGKSEKGAIFLD 240

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITT 308
             + SPY+F+QYWRN  DADV  F    T L + EI  +      +IN+AK+ +A E+T 
Sbjct: 241 TALVSPYDFFQYWRNTADADVEKFMLLFTFLSIEEIKSVC---AGDINKAKERLAFEVTA 297

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
           ++HG+EEAEKA   A   F    +   MPT ++S  +++ G+G++ L  +AG A++ ++A
Sbjct: 298 LIHGKEEAEKALEGARAAFSGGGNKDAMPTANLSLSKLNEGIGIIDLFAEAGLASTKSDA 357

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
           RR ++     IN   IS+ K  I  +  D    + L  GKK
Sbjct: 358 RRLVEQGGAFINEEKISDIKALIGKEKLDKDNEMILRAGKK 398


>gi|203287819|ref|YP_002222834.1| tyrosyl-tRNA synthetase [Borrelia recurrentis A1]
 gi|254783574|sp|B5RRH9|SYY_BORRA RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|201085039|gb|ACH94613.1| tyrosyl-tRNA synthetase [Borrelia recurrentis A1]
          Length = 406

 Score =  319 bits (818), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 170/401 (42%), Positives = 249/401 (62%), Gaps = 6/401 (1%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L +L +RGF+ Q +N  EL  L  +  +  Y+G D T++SLH GHL   M++  LQ+ GH
Sbjct: 5   LKVLDKRGFLKQCTNLEELSTLMDREKIVFYVGVDATSASLHIGHLIPFMVMLHLQRQGH 64

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
            PI L+GGGT+ IGDPS +D  R+++  ++I EN++ I       I    G     +LNN
Sbjct: 65  IPIILIGGGTTKIGDPSGKDSMRKILLKEDIDENVKTISSQLLKIIDLSNG---GYILNN 121

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL  I YI+ LRE+G +FSVNRMLSFE+ + RLK    LSF+EFNY +LQ+YDF  L+
Sbjct: 122 AEWLDGINYIEFLREVGIYFSVNRMLSFETYKRRLK--DGLSFIEFNYQLLQSYDFYMLS 179

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
           +  +C+LQ+GG DQWGNI+ G+DL  R    K+F LT PL+T + G KMGK+  GA++L+
Sbjct: 180 RMKNCKLQIGGDDQWGNIVSGVDLVNRKSGNKVFGLTLPLITRSDGNKMGKSEKGAVYLD 239

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITT 308
            E+ S Y+F+QY+RNI D DV  F    T L   EI+R+A ++G+ +N AK+I+A EIT 
Sbjct: 240 SELYSVYDFYQYFRNIPDLDVKKFLYLFTFLEEEEIERIASVKGQLLNNAKEILAFEITK 299

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
           +VHG++EA KA++AA   F        +P   +    +   + L+ L+V A   +S +EA
Sbjct: 300 IVHGKDEALKASSAAKAAFKGGDGRADIPFFKLELTNLEESILLVDLMVLAKVVSSKSEA 359

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
           RR + S  + I+   + ++   +   +F   G I+L  GKK
Sbjct: 360 RRLIDSGGVYIDKVRVGDQNYCLCKDNF-INGEIELKIGKK 399


>gi|203284283|ref|YP_002222023.1| tyrosyl-tRNA synthetase [Borrelia duttonii Ly]
 gi|254783572|sp|B5RLQ9|SYY_BORDL RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|201083726|gb|ACH93317.1| tyrosyl-tRNA synthetase [Borrelia duttonii Ly]
          Length = 406

 Score =  319 bits (817), Expect = 6e-85,   Method: Compositional matrix adjust.
 Identities = 170/401 (42%), Positives = 249/401 (62%), Gaps = 6/401 (1%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L +L +RGF+ Q +N  EL  L  +  +  Y+G D T++SLH GHL   M++  LQ+ GH
Sbjct: 5   LKVLDKRGFLKQCTNLEELSTLMDREKIVFYVGVDATSASLHIGHLIPFMVMLHLQRQGH 64

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
            PI L+GGGT+ IGDPS +D  R+++  ++I EN++ I       I    G     +LNN
Sbjct: 65  IPIILIGGGTTKIGDPSGKDSMRKILLKEDIDENVKTISSQLLKIIDLSNG---GYILNN 121

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL  I YI+ LRE+G +FSVNRMLSFE+ + RLK    LSF+EFNY +LQ+YDF  L+
Sbjct: 122 AEWLDGINYIEFLREVGIYFSVNRMLSFETYKRRLK--DGLSFIEFNYQLLQSYDFYMLS 179

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
           +  +C+LQ+GG DQWGNI+ G+DL  R    K+F LT PL+T + G KMGK+  GA++L+
Sbjct: 180 RMKNCKLQIGGDDQWGNIVSGVDLVNRKSGNKVFGLTLPLITRSDGKKMGKSEKGAVYLD 239

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITT 308
            E+ S Y+F+QY+RNI D DV  F    T L   EI+R+A ++G+ +N AK+I+A EIT 
Sbjct: 240 SELYSVYDFYQYFRNIPDLDVKKFLYLFTFLEEEEIERIASVKGQLLNNAKEILAFEITK 299

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
           +VHG++EA KA++AA   F        +P   +    +   + L+ L+V A   +S +EA
Sbjct: 300 IVHGKDEALKASSAAKAAFKGGDGRADIPFFKLELTNLEESILLVDLMVLAKVVSSKSEA 359

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
           RR + S  + I+   + ++   +   +F   G I+L  GKK
Sbjct: 360 RRLIDSGGVYIDKVRVGDQNYCLCKDNF-INGEIELKIGKK 399


>gi|331002727|ref|ZP_08326242.1| tyrosyl-tRNA synthetase [Lachnospiraceae oral taxon 107 str. F0167]
 gi|330407140|gb|EGG86644.1| tyrosyl-tRNA synthetase [Lachnospiraceae oral taxon 107 str. F0167]
          Length = 408

 Score =  319 bits (817), Expect = 6e-85,   Method: Compositional matrix adjust.
 Identities = 164/400 (41%), Positives = 246/400 (61%), Gaps = 6/400 (1%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I Q++N  E+  + + G  T YIG+D TA SLH GH   L L+  LQ  G+KPI
Sbjct: 7   LKARGLIAQVTNEEEISKMINNGKATFYIGFDPTADSLHVGHFMALCLMKRLQMAGNKPI 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GGGT +IGDPS R + R+++  ++I  N E  K   S FI++G  K  A M+NN  W
Sbjct: 67  ALVGGGTGMIGDPSGRSDLRKVLTIEDIDHNCECFKKQMSRFIEFGEDK--ARMVNNADW 124

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L  + Y++ +R+IG  FSVN ML  +   +R+     LSFLEFNYMILQ+YDF +L  +Y
Sbjct: 125 LRDLNYMEFIRDIGPHFSVNNMLRAKCYENRMA--NGLSFLEFNYMILQSYDFYKLFLDY 182

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
            C +Q GG DQW N++ G +L  R       A+T  LL  + G KMGKT+ GA+WL+   
Sbjct: 183 GCNMQFGGDDQWSNMLGGTELIRRKLGKDAHAMTITLLLNSEGKKMGKTVGGAVWLDPNK 242

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVH 311
           T+P+ F+QYWRN+ DADV++  + LT LP+ +I+ M+  +G ++NEAK+I+A  +T +VH
Sbjct: 243 TTPFEFYQYWRNLPDADVLTCLRMLTFLPLEQIEEMSAWEGAKLNEAKEILAMHLTELVH 302

Query: 312 GREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTNEARR 370
           G+EEA+KA  A+   F       ++PT  +  ++   G + L  ++V +G + + +EARR
Sbjct: 303 GKEEADKANAASKSLFVGGGDMSNVPTYILQPEDYRDGTIDLSGVLVVSGLSNTRSEARR 362

Query: 371 HLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
           +++   + I   +I + K     +DF   G + +  GKKN
Sbjct: 363 NIEQGGVSIEGEVIKDVKKTFTKEDFAGEG-LLIKRGKKN 401


>gi|320537135|ref|ZP_08037107.1| tyrosyl-tRNA synthetase [Treponema phagedenis F0421]
 gi|320146008|gb|EFW37652.1| tyrosyl-tRNA synthetase [Treponema phagedenis F0421]
          Length = 406

 Score =  317 bits (813), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 170/409 (41%), Positives = 243/409 (59%), Gaps = 9/409 (2%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L +L ERGF  Q +N   L     +G ++ Y+G D T  SLH GH+  +     L   GH
Sbjct: 5   LKVLQERGFFQQCTNLEGLSERMDKGPISFYVGIDPTGPSLHIGHMLPVFAARHLCAFGH 64

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           K   L GGGT+ IGDPS + E R+M+  + + +N+E I      F+ +  GKT     NN
Sbjct: 65  KACILAGGGTARIGDPSGKTEMRKMLSYETLDKNVESIIAQLGRFLDF-DGKT-IFHANN 122

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
           + WL ++ YID LREIGS FSVNRMLSFES + R+  E  LSF+EFNY +LQ+YDF+ L 
Sbjct: 123 KDWLANLNYIDFLREIGSQFSVNRMLSFESYKRRM--ETGLSFIEFNYQLLQSYDFLMLN 180

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
           + ++  +Q+GG DQWGNI+ G+DL  RL++ ++F LT  L+T A G KMGK+  GA++L+
Sbjct: 181 EKHNIEMQIGGDDQWGNIVAGVDLIRRLRSKEVFGLTFALVTRADGQKMGKSEKGALFLD 240

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITT 308
            ++ SPY F+QYWRN  DADV  F    T LP+ EID       + IN+AK+ +A E+T 
Sbjct: 241 PKLVSPYEFFQYWRNTMDADVRKFMLLFTFLPIEEIDSYI---AENINKAKEKLAYEVTR 297

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
           ++HG+E A+ A   A   F        MPTI +      +G+ ++TL V+A  A+S +EA
Sbjct: 298 LIHGKEAADSALEGARAAFGTGGDKSSMPTIEMPYTVFEKGIDIVTLFVEAQLASSKSEA 357

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN--HIICH 415
           RR ++     +  + I + K  I  ++ +S   + L  GKK    II H
Sbjct: 358 RRLIEQGGAFVGEATIKDIKAMINTENLNSEKELILRAGKKRFVRIIAH 406


>gi|227873338|ref|ZP_03991599.1| tyrosine--tRNA ligase [Oribacterium sinus F0268]
 gi|227840816|gb|EEJ51185.1| tyrosine--tRNA ligase [Oribacterium sinus F0268]
          Length = 406

 Score =  316 bits (809), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 167/387 (43%), Positives = 236/387 (60%), Gaps = 4/387 (1%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L ERG I Q++N  E+  + ++G    YIG+D TA SLH GH   L L+  LQ  G+KPI
Sbjct: 7   LQERGLIAQVTNEEEIRKMVNEGKAIFYIGFDPTADSLHVGHFMALCLMKRLQAAGNKPI 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GGGT +IGDPS R + R+MM ++ I  N    K   S FI +  GK  ALM+NN  W
Sbjct: 67  ALVGGGTGMIGDPSGRSDMRQMMTTEMIDHNCACFKKQMSRFIDFSEGK--ALMVNNADW 124

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L  + +++ LRE+G  FSVN ML      +RL   Q LSF EF+YM++Q YDF  L ++Y
Sbjct: 125 LRDMNFMEFLREVGPHFSVNEMLRARCYVNRLS--QGLSFFEFSYMLMQGYDFYRLYEDY 182

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
            C ++ GG DQW N++ G +L  +       A+T  LLT   G KMGKT SGA+WL+   
Sbjct: 183 GCNMEFGGDDQWSNMLAGTELIRKKLGKDAHAMTITLLTNKEGKKMGKTASGAVWLDAAK 242

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVH 311
           TSPY+F+QYWRN+DDADV    + LT +PM EI +M   +G E+N+AK+I+A  +T +VH
Sbjct: 243 TSPYDFYQYWRNVDDADVGKCLRLLTFIPMEEIKKMDAWEGAELNKAKEILAYHLTELVH 302

Query: 312 GREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRH 371
           G EEA+KA  AA   F    +S + P   + K E   G+ +L L+V +G A S  EARR+
Sbjct: 303 GAEEAKKAEEAAKSLFAGGGNSANTPKCVLKKAEYPEGIDILNLLVVSGLAPSKGEARRN 362

Query: 372 LKSNAIKINNSIISNEKLQIKLQDFDS 398
           ++   +      I++   Q+ L + ++
Sbjct: 363 VQQGGVSFAGEKITDIGRQLSLSELEN 389


>gi|156741773|ref|YP_001431902.1| tyrosyl-tRNA synthetase [Roseiflexus castenholzii DSM 13941]
 gi|189029767|sp|A7NK64|SYY_ROSCS RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|156233101|gb|ABU57884.1| tyrosyl-tRNA synthetase [Roseiflexus castenholzii DSM 13941]
          Length = 424

 Score =  314 bits (804), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 166/422 (39%), Positives = 252/422 (59%), Gaps = 15/422 (3%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L  L  RG +++ S+   LD L  +  VT YIG+D +A SLH GHL  L+ L   Q+ GH
Sbjct: 5   LDELRWRGLLYESSDG--LDDLLERERVTLYIGFDPSADSLHIGHLLPLLTLARFQRWGH 62

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
            PI+L GGGT +IGDPS + + R ++  +++  N+E IK   + F+ +  G   A++LNN
Sbjct: 63  TPIALAGGGTGLIGDPSGKTQERPLLSKEQVAANVEAIKRQLAQFLDFNAGDHSAMLLNN 122

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL  +  +D LR++G   +VN ML+ +SVRSR+  E  +SF EF+YM+LQAYDF  L 
Sbjct: 123 AEWLTRLSLMDFLRDVGKHLTVNYMLAKDSVRSRMMSETGISFTEFSYMLLQAYDFAYLF 182

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
           ++Y C+LQ GGSDQWGNI  GI+L  R    K + L  PL+T A GTK GKT SGA+WL+
Sbjct: 183 EHYGCKLQAGGSDQWGNITAGIELIRRTSGQKAYGLVYPLVTKADGTKFGKTESGAVWLD 242

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINEAKKIIATEI 306
            + TSPY F+Q+W N+DDADV  + +  T L  +EI+ + ++  +  E   A++ +A E+
Sbjct: 243 PKRTSPYRFYQFWYNVDDADVGKYLRYFTWLSAAEIEELEQITARQPERRTAQQRLAREV 302

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEV-SRGMGLLTL 355
           T MVHG     +A  A+   F  S+ S          + +P+I++ + ++   GM L+  
Sbjct: 303 TRMVHGEAALARAEEASQALFGGSLASLSADDVADIFEDVPSITLPRQDLEGDGMSLIDA 362

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +V+ G ATS ++ARR ++   I INN   ++   ++ L D      I L  G++++ +  
Sbjct: 363 LVRCGIATSKSDARRAIEGGGIYINNVQSADVGRRLTLHDSIDGQCIVLRKGRRHYHLIR 422

Query: 416 LC 417
           L 
Sbjct: 423 LV 424


>gi|325478249|gb|EGC81368.1| tyrosine--tRNA ligase [Anaerococcus prevotii ACS-065-V-Col13]
          Length = 416

 Score =  313 bits (801), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 165/400 (41%), Positives = 250/400 (62%), Gaps = 7/400 (1%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG+  Q +N  EL  L     V  Y G+D TA SL  GHL Q+M++  +Q  GH+P+
Sbjct: 16  LVDRGYYEQATNEEELKELLKNESVKFYCGFDATADSLTVGHLIQIMVMMRMQNYGHRPV 75

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GGGT++IGDPS R + R++M  + I  N E     F  F+ +  GK  A MLNN+ W
Sbjct: 76  ALLGGGTTLIGDPSGRSDMRQVMTEERIDHNAECFYKQFQRFLDFSDGK--ASMLNNKDW 133

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L +++++  LR++GS F VN M+  ++ ++R+     L+F EF+YM+LQ+YDF+++ ++ 
Sbjct: 134 LLNLEFVSFLRDVGSEFLVNEMIKKDAYKNRMA-AGGLTFFEFSYMLLQSYDFLKMYRDD 192

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
             +L+MGGSDQW NII G+DL ++ +  K + +T  LLTTA G KMGK+  GA+WL++E 
Sbjct: 193 GVKLEMGGSDQWSNIIGGVDLIKKKENGKAYGMTFSLLTTADGVKMGKSQKGAVWLDEEK 252

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM-AKLQGKEINEAKKIIATEITTMV 310
           TSPY  +QY RN+DD DV  F  +LT LP +E  R+ +    K+IN+AK+ +A E+  +V
Sbjct: 253 TSPYEMFQYMRNVDDRDVEKFLLQLTFLPTAECRRLGSATDAKDINKAKETLAYEVVKLV 312

Query: 311 HGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARR 370
           HG+E+A++A  AA   F        MPT SI K+ + +  GLL L+ + G   S  EARR
Sbjct: 313 HGKEKADEALAAAKALFSGKGDESAMPTTSIEKENLPQ--GLLALMTEVGLTKSNGEARR 370

Query: 371 HLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            +K   + IN+  I++   ++  +D    G I +  GKKN
Sbjct: 371 IIKQGGVSINDEKITDPSFEV-TEDIFEDGRIIIKKGKKN 409


>gi|119953162|ref|YP_945371.1| tyrosyl-tRNA synthetase [Borrelia turicatae 91E135]
 gi|254783575|sp|A1QZF9|SYY_BORT9 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|119861933|gb|AAX17701.1| tyrosyl-tRNA synthetase [Borrelia turicatae 91E135]
          Length = 406

 Score =  313 bits (801), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 164/402 (40%), Positives = 252/402 (62%), Gaps = 8/402 (1%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L IL +RGF+ Q +N   L  L  +  V  Y+G D T++SLH GHL   M++  LQ+ GH
Sbjct: 5   LEILEKRGFLKQCTNLEALSTLMDKERVVFYVGVDATSTSLHIGHLIPFMVMAHLQRQGH 64

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
            PI+L+GGGT+ IGDPS +D  R+++  ++I++N++ I+      I +  G     +L+N
Sbjct: 65  IPIALVGGGTTKIGDPSGKDAMRKILSKEDIEKNVKAIRAQLLRIIDFSHG----YILDN 120

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL +I YI+ LR+IG  FSVNRML FE+ + R+K    LSF+EFNY +LQ+YDF  L 
Sbjct: 121 SAWLDNINYIEFLRDIGVCFSVNRMLGFETYKRRIK--DGLSFIEFNYQLLQSYDFYMLN 178

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
           K  +C+LQ+GG DQWGNI+ G+DL ++    ++F LT PL+T + G KMGK+  GA++L+
Sbjct: 179 KIKNCKLQIGGDDQWGNIVSGVDLIKKKLGTEVFGLTLPLITRSDGKKMGKSEKGAVYLD 238

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITT 308
            E+ S Y+F+QY+RN+ D DV +F    T L   EI+ M+ ++G  +N+AK+ +A EIT 
Sbjct: 239 AELYSVYDFYQYFRNVPDLDVKNFLYLFTFLGDDEIEHMSSVKGYLLNKAKETLAFEITK 298

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQ-HMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
           +VHG + A KA++AA   F  S   +  +P   ++ D +   + L+ L+V +   +S +E
Sbjct: 299 IVHGEDAALKASSAARAAFKGSEGDRADIPFFKLALDSLEGSILLIDLMVLSKVVSSKSE 358

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
           ARR + S  + I+   I ++   +   +F   G I+L  GKK
Sbjct: 359 ARRLINSGGVYIDKVRIGDQDYCLNKDNF-INGEIELKIGKK 399


>gi|315652795|ref|ZP_07905769.1| tyrosine--tRNA ligase [Eubacterium saburreum DSM 3986]
 gi|315484997|gb|EFU75405.1| tyrosine--tRNA ligase [Eubacterium saburreum DSM 3986]
          Length = 411

 Score =  312 bits (800), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 164/400 (41%), Positives = 240/400 (60%), Gaps = 6/400 (1%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I Q++N  E+  + + G  T YIG+D TA SLH GH   L L+  LQ  G+KPI
Sbjct: 10  LKARGLIAQVTNEEEISKMINNGEATFYIGFDPTADSLHVGHFMALCLMKRLQMAGNKPI 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GGGT +IGDPS R + R+++  ++I  N E  K   S FI++G  K  A M+NN  W
Sbjct: 70  ALVGGGTGMIGDPSGRSDLRKVLTIEDIDHNCECFKKQMSRFIEFGENK--ARMVNNADW 127

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L  + Y++ +R+IG  FSVN ML  +   +R+     LSFLEFNYMILQ+YDF  L  +Y
Sbjct: 128 LRDLNYMEFIRDIGPHFSVNNMLRAKCYENRMA--NGLSFLEFNYMILQSYDFYRLFLDY 185

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
            C +Q GG DQW N++ G +L  R       A+T  LL  + G KMGKT+ GA+WL+   
Sbjct: 186 GCNMQFGGDDQWSNMLGGTELIRRKLGKDAHAMTITLLLNSEGKKMGKTVGGAVWLDPNK 245

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVH 311
           T+P+ F+QYWRN+ DADV++  + LT LP+ +I+ M+  +G ++NEAK+I+A  +T +VH
Sbjct: 246 TTPFEFYQYWRNLPDADVLTCLRMLTFLPLEQIEEMSLWEGAKLNEAKEILAMHLTELVH 305

Query: 312 GREEAEKAATAAMECFDMSIHSQHMPT-ISISKDEVSRGMGLLTLIVKAGFATSTNEARR 370
           G+EEA+KA  A    F       ++PT I   +D     + L  ++   G + + +EARR
Sbjct: 306 GKEEAKKANAAGKSLFTGGGDMSNVPTYILRPEDYRDDTIDLSGVLAVCGLSKTRSEARR 365

Query: 371 HLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
           +++   + I   +I + K      DF   G + +  GKKN
Sbjct: 366 NIEQGGVSIEGEVIKDIKKTFTKDDFAGEG-LLIKRGKKN 404


>gi|160941404|ref|ZP_02088741.1| hypothetical protein CLOBOL_06297 [Clostridium bolteae ATCC
           BAA-613]
 gi|158435965|gb|EDP13732.1| hypothetical protein CLOBOL_06297 [Clostridium bolteae ATCC
           BAA-613]
          Length = 408

 Score =  312 bits (799), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 156/370 (42%), Positives = 229/370 (61%), Gaps = 4/370 (1%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I Q+++  E+  L + G    YIG+D TA SLH GH   L L+  LQ  G++P+
Sbjct: 7   LEARGLIAQVTDEAEIRELVNAGKAKFYIGFDPTADSLHVGHFMALCLMKRLQMAGNRPV 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+GGGT  IGDPS R + R MM    I+ N E  K     FI +  G+  A+++NN  W
Sbjct: 67  VLLGGGTGYIGDPSGRTDMRSMMGPDVIRRNCECFKRQMERFIDF-DGENGAIVVNNADW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L ++ YI+LLR++G+ FSVN ML  E  + R+  E+ LSFLEFNYMI+Q+YDF  L K  
Sbjct: 126 LLNLNYIELLRDVGACFSVNNMLRAECYKQRM--EKGLSFLEFNYMIMQSYDFYHLYKEL 183

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
            C +Q GG DQW N++ G +L  R      +A+T  LL  + G KMGKT  GA+WL+ E 
Sbjct: 184 GCNMQFGGDDQWSNMLGGTELIRRKLGKDAYAMTITLLMNSEGNKMGKTARGAVWLDPEK 243

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVH 311
           TSP+ F+QYWRNI DADV+   + LT +P+ EID M   +G ++N AK+I+A ++T +VH
Sbjct: 244 TSPFEFYQYWRNIADADVMKCIRMLTFIPVEEIDAMDGWEGAQLNRAKEILAYDLTALVH 303

Query: 312 GREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTNEARR 370
           G EEA +A   ++  F  ++   +MP   + ++++ +G + ++ L+V    A S +EARR
Sbjct: 304 GEEEARRAKETSVSLFTGAMDDDNMPFTEVGEEKLVQGSINIMDLLVLCRLAASKSEARR 363

Query: 371 HLKSNAIKIN 380
            +    I+++
Sbjct: 364 LITQGGIQVS 373


>gi|283779905|ref|YP_003370660.1| tyrosyl-tRNA synthetase [Pirellula staleyi DSM 6068]
 gi|283438358|gb|ADB16800.1| tyrosyl-tRNA synthetase [Pirellula staleyi DSM 6068]
          Length = 426

 Score =  312 bits (799), Expect = 8e-83,   Method: Compositional matrix adjust.
 Identities = 161/426 (37%), Positives = 246/426 (57%), Gaps = 14/426 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +D  + LS RG IHQ ++P EL    ++   T Y G+D TA SLH G L  LMLL   QK
Sbjct: 2   TDIFAELSWRGLIHQTTSPDELPKWLAEQSRTLYCGFDPTADSLHVGSLLPLMLLRRFQK 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+P++L+GG T +IGDPS + E R+++ +  + +N+  I+      + +  G + A +
Sbjct: 62  AGHRPLALVGGATGMIGDPSGKSEERKLLDTDSLAKNVAGIEQQLRLLLDF-EGPSGARL 120

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           LNN  W+    ++D LR++G    V+ M++ +S+  R +RE  +S+ EF+YM+LQAYDFV
Sbjct: 121 LNNHDWMGKFSFLDFLRDVGKHVPVSVMMAKDSISGRFEREAGISYTEFSYMLLQAYDFV 180

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L K++ C LQ+GGSDQWGNI  GIDL  R++ P+L+ +T PLL  + GTKMGK+  GAI
Sbjct: 181 HLNKHFGCELQIGGSDQWGNITAGIDLARRMQGPQLYGMTCPLLLKSDGTKMGKSEKGAI 240

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKKIIA 303
           +L+ + TSPY F+QYW N+ DADV    + LT L   EID +  ++       +++K +A
Sbjct: 241 YLSAKRTSPYAFYQYWVNVADADVGKCLRFLTELTQEEIDALDASRSTDAAARQSQKRLA 300

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVS-RGMGL 352
            E+T M+HG E    A  A    F   I              +P+  + KD +S  G+ L
Sbjct: 301 EELTRMIHGTEGLSAAERATAIFFGAEISQLSDDQLTEIFADVPSQQLPKDRLSGDGLSL 360

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           +  +V++G A S  EARR ++     +NN+ I+   +++      S   + L  GKK + 
Sbjct: 361 IDALVESGLAPSKKEARRTIEQGGAYVNNTKITAVDMKLSPASLASETTVVLRSGKKKYA 420

Query: 413 ICHLCG 418
           +    G
Sbjct: 421 LLRFVG 426


>gi|148656197|ref|YP_001276402.1| tyrosyl-tRNA synthetase [Roseiflexus sp. RS-1]
 gi|189029768|sp|A5UUZ9|SYY_ROSS1 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|148568307|gb|ABQ90452.1| tyrosyl-tRNA synthetase [Roseiflexus sp. RS-1]
          Length = 424

 Score =  312 bits (799), Expect = 8e-83,   Method: Compositional matrix adjust.
 Identities = 163/416 (39%), Positives = 245/416 (58%), Gaps = 15/416 (3%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L  L  RG +++ S+   LD L ++  VT YIG+D +A SLH GHL  L+ L   Q+ GH
Sbjct: 5   LDELRWRGLLYESSDG--LDELLTRERVTLYIGFDPSADSLHIGHLLPLLTLARFQRWGH 62

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
            PI+L GGGT +IGDPS + + R ++  +++  N+E IKG  + F+ +  G   AL+LNN
Sbjct: 63  TPIALAGGGTGLIGDPSGKTQERPLLSKEQVAANVEAIKGQLAQFLDFNAGDHSALLLNN 122

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL  +  +D LR++G   +VN ML+ +SVRSR+  E  +SF EF+YM+LQAYDF  L 
Sbjct: 123 ADWLTRLSLMDFLRDVGKHLTVNYMLAKDSVRSRMTSETGISFTEFSYMLLQAYDFAYLF 182

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
           ++Y C+LQ GGSDQWGNI  GI+L  R    K + L  PL+T A GTK GKT SGA+WL+
Sbjct: 183 EHYGCKLQAGGSDQWGNITAGIELIRRTLGQKAYGLVYPLVTKADGTKFGKTESGAVWLD 242

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIATEI 306
            + TSPY F+Q+W N+DDADV  + +  T L   EI+ + ++     E   A++ +A E+
Sbjct: 243 PKRTSPYRFYQFWYNVDDADVGKYLRYFTWLSADEIEELERITASQPERRTAQQRLAREV 302

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEV-SRGMGLLTL 355
           T MVHG     +A  A+   F  S+            + +P+ ++ + +    G  L+ +
Sbjct: 303 TRMVHGETALARAEEASQALFGGSLARLSAGDVIDIFEDVPSTTLPRQDFEGDGFPLIDV 362

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           +++ G ATS ++ARR ++   I +NN    +   ++ L D      I L  G+K +
Sbjct: 363 LLRCGIATSKSDARRTIEGGGIYVNNIQCPDVGRRLTLNDSIDGQFIVLRKGRKQY 418


>gi|85858578|ref|YP_460780.1| tyrosyl-tRNA synthetase [Syntrophus aciditrophicus SB]
 gi|97202272|sp|Q2LR98|SYY_SYNAS RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|85721669|gb|ABC76612.1| tyrosyl-tRNA synthetase [Syntrophus aciditrophicus SB]
          Length = 428

 Score =  311 bits (797), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 170/422 (40%), Positives = 257/422 (60%), Gaps = 25/422 (5%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           +  ERGFI Q+++   +     +  +  YIG+D TA SLH G L  +M L  LQ+ GH  
Sbjct: 9   VFMERGFIEQVTDENAVR-KALEAPLACYIGFDPTARSLHIGSLVPIMALIHLQRHGHTS 67

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           I+L+GGGT++IGDPS + E R+++  ++I+ N   ++  F+ ++ +   K  A+M+NN  
Sbjct: 68  IALVGGGTALIGDPSGKTEMRQILTREKIELNATCMRRQFARYLSFEDKK--AMMINNAD 125

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           WL  + YI  LR+IG  FSVN+ML+ ES + RL  E+ L+F+EFNYM+LQAYDF+ L +N
Sbjct: 126 WLTKLNYISFLRDIGRHFSVNKMLAAESYKMRL--EKGLNFIEFNYMLLQAYDFLYLFQN 183

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKE 250
           ++C +QMGG+DQWGN++ G+DL  R++     ++T PLLTTA+G KMGKT  GA+WL++E
Sbjct: 184 HNCVMQMGGNDQWGNMLAGVDLIRRVEGKVAHSMTFPLLTTATGQKMGKTEKGAVWLDRE 243

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMV 310
           +TSPY ++QYW N  D DV  F    T LPM EI ++  L  KE+N AK I+A E T + 
Sbjct: 244 LTSPYEYYQYWINTGDIDVGKFLALFTFLPMEEIHQVKSLSDKELNMAKAILAFEATKIT 303

Query: 311 HGREEAEKAATAAMECF------------------DMSIHSQHMPTISISKDEVSRGMGL 352
           HG + A  A  A+   F                   +S  +  +P I  S +E+++G+  
Sbjct: 304 HGEDAALAAWNASAVAFGVKLIDTSLMPSSTIPRGQLSQDASAIPFIKKSWNELAKGIPA 363

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKIN-NSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
             ++ + G  +S +EARR +      +N N I + ++L I  +  D +G IKL  GKK +
Sbjct: 364 YEIMHECGLCSSKSEARRLIAQGGGYVNENPIFAFDEL-ITTEHLDRSGQIKLRKGKKKY 422

Query: 412 II 413
           +I
Sbjct: 423 MI 424


>gi|227501174|ref|ZP_03931223.1| tyrosine--tRNA ligase [Anaerococcus tetradius ATCC 35098]
 gi|227216575|gb|EEI81979.1| tyrosine--tRNA ligase [Anaerococcus tetradius ATCC 35098]
          Length = 431

 Score =  310 bits (795), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 162/400 (40%), Positives = 248/400 (62%), Gaps = 7/400 (1%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG+  Q +N  EL  L     V  Y G+D TA SL  GHL Q+M++  +Q  GH+P+
Sbjct: 31  LVDRGYYEQATNEEELKDLLKNESVKFYCGFDATADSLTVGHLIQIMVMMRMQNYGHRPV 90

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GGGT++IGDPS R + R++M  + I  N +     F  F+ +  GK  A MLNN+ W
Sbjct: 91  ALLGGGTTLIGDPSGRSDMRQVMTVERINHNADCFYKQFQRFLDFSDGK--ATMLNNKDW 148

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L ++ +++ LR++GS F VN M+  ++ ++R+     L+F EF+YM+LQ+YDF+++ +  
Sbjct: 149 LLNLNFVEFLRDVGSEFLVNEMIKKDAYKNRMA-AGGLTFFEFSYMLLQSYDFLKMYRED 207

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
              L+MGGSDQW NII G+DL ++ +  K + +T  LLTTA G KMGK+  GA+WL++  
Sbjct: 208 GVSLEMGGSDQWSNIIGGVDLIKKHENGKAYGMTFSLLTTADGVKMGKSQKGAVWLDENK 267

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA-KLQGKEINEAKKIIATEITTMV 310
           TSPY  +QY RN+DD DV  F  +LT LP  E  R+  + +  EIN+AK+I+A E+  +V
Sbjct: 268 TSPYEMFQYMRNVDDRDVEKFLLQLTFLPTGECKRLGNQTEASEINKAKEILAYEVVKLV 327

Query: 311 HGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARR 370
           HG+E+A++A  AA   F        MPT  I K ++ +  GLL L+ + G   S  EARR
Sbjct: 328 HGKEKADEALAAARALFSGKGDESAMPTSQIGKADLPK--GLLALMTETGLTKSNGEARR 385

Query: 371 HLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            ++   + IN++ I++   ++  + F+  G I +  GKKN
Sbjct: 386 AIQQGGVSINDTKITDPSFEVTEEIFEE-GRIIIKKGKKN 424


>gi|191165889|ref|ZP_03027726.1| tyrosyl-tRNA synthetase [Escherichia coli B7A]
 gi|190904020|gb|EDV63732.1| tyrosyl-tRNA synthetase [Escherichia coli B7A]
          Length = 424

 Score =  309 bits (791), Expect = 7e-82,   Method: Compositional matrix adjust.
 Identities = 169/423 (39%), Positives = 247/423 (58%), Gaps = 15/423 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 4   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +QE ++KI+   + F+ +  G+  A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDCGENSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDF 184
            NN  W  ++  +  LR+IG  FSVN+M++ E+V+ RL RE Q +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNREDQGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K YD  LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 184 ACLNKQYDVVLQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+ +    K  GK    A+ +
Sbjct: 244 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINALEEEDKNSGK-APRAQYV 302

Query: 302 IATEITTMVHGREEAEKAATAAMEC-FDMSIHS------QHMPTISISKDEVSRGMGLLT 354
           +A ++T +VHG EE  +AA    EC F  S+ +      + +    +   E+ +G  L+ 
Sbjct: 303 LAEQVTRLVHG-EEGLQAAKRITECLFSGSLSALSEADFEQLAQDGVPMVEMEKGADLMQ 361

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +V +    S  +AR+ + SNAI IN    S+ +   K +D        L  GKKN+  C
Sbjct: 362 ALVDSELQPSRGQARKTIASNAITINGEKQSDPEYFFKEEDRLFGRYTLLRRGKKNY--C 419

Query: 415 HLC 417
            +C
Sbjct: 420 LIC 422


>gi|293446013|ref|ZP_06662435.1| tyrosyl-tRNA synthetase [Escherichia coli B088]
 gi|309793403|ref|ZP_07687830.1| tyrosyl-tRNA synthetase [Escherichia coli MS 145-7]
 gi|291322843|gb|EFE62271.1| tyrosyl-tRNA synthetase [Escherichia coli B088]
 gi|308122990|gb|EFO60252.1| tyrosyl-tRNA synthetase [Escherichia coli MS 145-7]
          Length = 428

 Score =  308 bits (790), Expect = 8e-82,   Method: Compositional matrix adjust.
 Identities = 169/423 (39%), Positives = 247/423 (58%), Gaps = 15/423 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 8   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 67

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +QE ++KI+   + F+ +  G+  A+ 
Sbjct: 68  AGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDCGENSAIA 127

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDF 184
            NN  W  ++  +  LR+IG  FSVN+M++ E+V+ RL RE Q +SF EF+Y +LQ YDF
Sbjct: 128 ANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNREDQGISFTEFSYNLLQGYDF 187

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K YD  LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 188 ACLNKQYDVVLQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 247

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+ +    K  GK    A+ +
Sbjct: 248 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINALEEEDKNSGK-APRAQYV 306

Query: 302 IATEITTMVHGREEAEKAATAAMEC-FDMSIHS------QHMPTISISKDEVSRGMGLLT 354
           +A ++T +VHG EE  +AA    EC F  S+ +      + +    +   E+ +G  L+ 
Sbjct: 307 LAEQVTRLVHG-EEGLQAAKRITECLFSGSLSALSEADFEQLAQDGVPMVEMEKGADLMQ 365

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +V +    S  +AR+ + SNAI IN    S+ +   K +D        L  GKKN+  C
Sbjct: 366 ALVDSELQPSRGQARKTIASNAITINGEKQSDPEYFFKEEDRLFGRFTLLRRGKKNY--C 423

Query: 415 HLC 417
            +C
Sbjct: 424 LIC 426


>gi|285808375|gb|ADC35903.1| putative tyrosyl-tRNA synthetase [uncultured bacterium 59]
          Length = 427

 Score =  308 bits (790), Expect = 8e-82,   Method: Compositional matrix adjust.
 Identities = 161/394 (40%), Positives = 237/394 (60%), Gaps = 18/394 (4%)

Query: 36  VTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMR 95
           VTAYIG+D TASSLH G L  +M L  LQ+ GH PI+++GGGT +IGDPS + + R ++ 
Sbjct: 33  VTAYIGFDPTASSLHVGSLLPVMALARLQRFGHAPIAIVGGGTGMIGDPSGKAQERLLLT 92

Query: 96  SQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLS 155
            ++I EN+  IK   S F+ +  G   A ++NN  WL +   +  LR+ G +F+VN ML 
Sbjct: 93  REQIDENVSGIKQQLSRFLDFDRGDNPARLVNNSDWLAAFDLLGFLRDTGKYFTVNYMLQ 152

Query: 156 FESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER 215
            ESV  RL+ E  +SF EF+Y++LQA DFVEL   Y C +Q+GGSDQWGNI  GIDL  +
Sbjct: 153 KESVNRRLESEDGISFTEFSYLLLQARDFVELFDRYGCTMQLGGSDQWGNITAGIDLIRK 212

Query: 216 LKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKR 275
           L+  K   L  PL+TTASG K GKT +G IWL+   TSP+ F+Q+W N DD DVV++ K 
Sbjct: 213 LRAQKAHGLVMPLVTTASGVKFGKTEAGTIWLDAARTSPFKFYQFWLNTDDRDVVTYLKF 272

Query: 276 LTTLPMSEIDRM--AKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS 333
            T L    ID +  A     +  EA++++A E TT+VHG ++  +A  A+   F   I +
Sbjct: 273 FTFLERPAIDALDAATKDAPQKREAQRVLAREATTLVHGADQVTRAEHASTMLFGEDIMA 332

Query: 334 ----------QHMPTISISKDEVS-RGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNS 382
                     + +P   +S D+ +  G+G++ L+ +   A S ++ARR ++S  + +NN 
Sbjct: 333 LDADDVLAVFEDVPATELSADDFAGDGIGMVDLVARVQLAASKSDARRLVQSGGVYVNNR 392

Query: 383 IISNEKLQIKLQDFDSTGN--IKLSFG-KKNHII 413
            +S+  +Q +L    + G     L  G K+NH++
Sbjct: 393 RVSD--VQARLTRDQAIGGRVFVLRKGQKQNHLV 424


>gi|30063152|ref|NP_837323.1| tyrosyl-tRNA synthetase [Shigella flexneri 2a str. 2457T]
 gi|194434313|ref|ZP_03066578.1| tyrosyl-tRNA synthetase [Shigella dysenteriae 1012]
 gi|30041401|gb|AAP17130.1| tyrosine tRNA synthetase [Shigella flexneri 2a str. 2457T]
 gi|194417461|gb|EDX33565.1| tyrosyl-tRNA synthetase [Shigella dysenteriae 1012]
 gi|281601071|gb|ADA74055.1| putative Tyrosyl-tRNA synthetase [Shigella flexneri 2002017]
 gi|313648912|gb|EFS13349.1| tyrosyl-tRNA synthetase [Shigella flexneri 2a str. 2457T]
 gi|320181340|gb|EFW56259.1| tyrosyl-tRNA synthetase [Shigella boydii ATCC 9905]
 gi|332094002|gb|EGI99055.1| tyrosyl-tRNA synthetase [Shigella dysenteriae 155-74]
 gi|332757144|gb|EGJ87484.1| tyrosyl-tRNA synthetase [Shigella flexneri 4343-70]
 gi|332758119|gb|EGJ88444.1| tyrosyl-tRNA synthetase [Shigella flexneri 2747-71]
 gi|332758468|gb|EGJ88789.1| tyrosyl-tRNA synthetase [Shigella flexneri K-671]
 gi|332767038|gb|EGJ97237.1| tyrosyl-tRNA synthetase [Shigella flexneri 2930-71]
 gi|333003899|gb|EGK23434.1| tyrosyl-tRNA synthetase [Shigella flexneri K-218]
 gi|333005293|gb|EGK24813.1| tyrosyl-tRNA synthetase [Shigella flexneri VA-6]
 gi|333005870|gb|EGK25386.1| tyrosyl-tRNA synthetase [Shigella flexneri K-272]
 gi|333018021|gb|EGK37326.1| tyrosyl-tRNA synthetase [Shigella flexneri K-304]
 gi|333018887|gb|EGK38180.1| tyrosyl-tRNA synthetase [Shigella flexneri K-227]
          Length = 424

 Score =  308 bits (790), Expect = 9e-82,   Method: Compositional matrix adjust.
 Identities = 169/423 (39%), Positives = 247/423 (58%), Gaps = 15/423 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 4   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +QE ++KI+   + F+ +  G+  A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDCGENSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDF 184
            NN  W  ++  +  LR+IG  FSVN+M++ E+V+ RL RE Q +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNREDQGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K YD  LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 184 ACLNKQYDVVLQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+ +    K  GK    A+ +
Sbjct: 244 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINALEEEDKNSGK-APRAQYV 302

Query: 302 IATEITTMVHGREEAEKAATAAMEC-FDMSIHS------QHMPTISISKDEVSRGMGLLT 354
           +A ++T +VHG EE  +AA    EC F  S+ +      + +    +   E+ +G  L+ 
Sbjct: 303 LAEQVTRLVHG-EEGLQAAKRITECLFSGSLSALSEADFEQLAQDGVPMVEMEKGADLMQ 361

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +V +    S  +AR+ + SNAI IN    S+ +   K +D        L  GKKN+  C
Sbjct: 362 ALVDSELQPSRGQARKTIASNAITINGEKQSDPEYFFKEEDRLFGRFTLLRRGKKNY--C 419

Query: 415 HLC 417
            +C
Sbjct: 420 LIC 422


>gi|32475732|ref|NP_868726.1| tyrosyl-tRNA synthetase [Rhodopirellula baltica SH 1]
 gi|81659983|sp|Q7UM14|SYY_RHOBA RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|32446275|emb|CAD76103.1| tyrosyl-tRNA synthetase [Rhodopirellula baltica SH 1]
          Length = 438

 Score =  308 bits (789), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 161/418 (38%), Positives = 245/418 (58%), Gaps = 20/418 (4%)

Query: 15  RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLM 74
           RG ++Q ++   +  L + G  T YIG+D TA+SLH G + QLM+L   Q+ GH PI+L+
Sbjct: 23  RGLLNQTTDENGIAELLNSGPQTIYIGFDPTATSLHVGGMMQLMMLRRFQRAGHNPIALV 82

Query: 75  GGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCS 134
           GG T +IGDPS + E R ++ + ++Q+N++ +      F+ +  G   A +LNN  W+  
Sbjct: 83  GGATGMIGDPSGKSEERNLLSADQLQKNVDGVAAQMRHFLDF-EGDNAAKLLNNFDWMKD 141

Query: 135 IKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCR 194
             Y++ LR++G  F V  M+  ESVRSRL+ E  LS+ EF+YM+LQAYDFV LA+ +DCR
Sbjct: 142 YSYLEFLRDVGKNFPVGAMMGKESVRSRLESEAGLSYTEFSYMLLQAYDFVNLAQTHDCR 201

Query: 195 LQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSP 254
           +Q GGSDQWGNI  GIDLG R+   +LF +T+PLLTT+ G KMGKT SGA+WL+ E TSP
Sbjct: 202 IQAGGSDQWGNITAGIDLGRRMLGKQLFGITAPLLTTSDGRKMGKTESGAVWLDPERTSP 261

Query: 255 YNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE-----AKKIIATEITTM 309
           Y F+QYW N+ D DV+     LT +  +E D   +L+ K  N+     A+K +A  +T +
Sbjct: 262 YAFYQYWINVADEDVMRCLAYLTEIERAEYD---ELEDKTKNDPGQRTAQKRLAQWLTEL 318

Query: 310 VHGREEAEKAATAAMECFDMSI----HSQ------HMPTISISKDEV-SRGMGLLTLIVK 358
           VHG    + A  A    F   +     SQ       +P+  + K  +   G+ ++  +  
Sbjct: 319 VHGEAGVQSAQRATQILFGGELGDTTDSQLREIFADVPSCDVPKSALEGEGLWIVEALQT 378

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           A    S  +ARR L    + +NN+ + + + ++ + D D    + L  GK+ + +  +
Sbjct: 379 AKLCNSGGDARRALSEGGVYVNNTRVEDVQKRLTVDDLDGRSVLVLRRGKRKYALLKI 436


>gi|71908788|ref|YP_286375.1| tyrosyl-tRNA synthetase [Dechloromonas aromatica RCB]
 gi|97201327|sp|Q47B76|SYY_DECAR RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|71848409|gb|AAZ47905.1| tyrosyl-tRNA synthetase [Dechloromonas aromatica RCB]
          Length = 424

 Score =  308 bits (789), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 170/395 (43%), Positives = 234/395 (59%), Gaps = 23/395 (5%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           ++S  +  L +RG I QI++   LD L ++  VT Y G+D TA SLH GHL  +++L   
Sbjct: 2   YQSPLIQDLHDRGLIAQITDAAALDKLLTEESVTLYCGFDPTADSLHLGHLVPVLILKRF 61

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q+ GHKPI+L+GG T +IGDPSF+   R++     I   + KI+G    F+K+  G   A
Sbjct: 62  QEAGHKPIALVGGATGMIGDPSFKATERKLNTPDVIASWVGKIRGQVEPFLKF-DGANAA 120

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAY 182
           +M NN  W   +  ++ +R+IG  FSVN M+  ESV+ RL RE Q +S+ EF+Y +LQ Y
Sbjct: 121 IMANNYDWFGGMNCLEFMRDIGKHFSVNAMIKKESVQQRLTREDQGISYTEFSYSLLQGY 180

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DF EL K Y C LQ+GGSDQWGNI+ G DL  RL    +F LT PL+T A GTK GKT S
Sbjct: 181 DFAELNKRYGCVLQIGGSDQWGNIVAGTDLTRRLHQKHVFGLTLPLITKADGTKFGKTES 240

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLP---MSEIDRMAKLQGKEINEAK 299
           GAIWL+ + TSPY F+Q+W N  DADV  F    T LP   ++EI+   K  G +  EA+
Sbjct: 241 GAIWLDPKKTSPYAFYQFWLNTSDADVYKFMNFFTFLPVARIAEIEAADKASGTK-PEAQ 299

Query: 300 KIIATEITTMVHGREEAEKAATAAMECF-----------DMSIHSQH-MPTISISKDEVS 347
           +I+A E T +VHG E A  AA    EC            D+   +Q  MP + + K    
Sbjct: 300 RILAEEATRLVHG-EVALMAARRITECLFSGQLADLTENDLEQLAQDGMPGVQLEKSNT- 357

Query: 348 RGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNS 382
              GL+  +V +G A S +EAR  ++S ++ IN +
Sbjct: 358 ---GLIDALVASGLAKSKSEARTFIQSGSVAINGN 389


>gi|327542973|gb|EGF29422.1| tyrosyl-tRNA synthetase [Rhodopirellula baltica WH47]
          Length = 432

 Score =  307 bits (786), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 161/418 (38%), Positives = 244/418 (58%), Gaps = 20/418 (4%)

Query: 15  RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLM 74
           RG ++Q ++   +  L + G  T YIG+D TA+SLH G + QLM+L   Q+ GH PI+L+
Sbjct: 17  RGLLNQTTDENGIAELLNSGPQTIYIGFDPTATSLHVGGMMQLMMLRRFQRAGHNPIALV 76

Query: 75  GGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCS 134
           GG T +IGDPS + E R ++ + ++Q+N++ +      F+ +  G   A +LNN  W+  
Sbjct: 77  GGATGMIGDPSGKSEERNLLSADQLQKNVDGVAAQMRHFLDF-EGDNAAKLLNNFDWMKD 135

Query: 135 IKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCR 194
             Y++ LR++G  F V  M+  ESVRSRL+ E  LS+ EF+YM+LQAYDFV LA+ +DCR
Sbjct: 136 YSYLEFLRDVGKNFPVGAMMGKESVRSRLESEAGLSYTEFSYMLLQAYDFVNLAQTHDCR 195

Query: 195 LQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSP 254
           +Q GGSDQWGNI  GIDLG R+   +LF +T+PLLTT+ G KMGKT SGA+WL+ E TSP
Sbjct: 196 IQAGGSDQWGNITAGIDLGRRMLGKQLFGITAPLLTTSDGRKMGKTESGAVWLDPERTSP 255

Query: 255 YNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE-----AKKIIATEITTM 309
           Y F+QYW N+ D DV+     LT +  +E D   +L+ K  N+     A+K +A  +T +
Sbjct: 256 YAFYQYWINVADEDVMRCLAYLTEIERAEYD---ELEDKTKNDPGQRTAQKRLAQWLTEL 312

Query: 310 VHGREEAEKAATAAMECFDMSI----HSQ------HMPTISISKDEV-SRGMGLLTLIVK 358
           VHG    + A  A    F   +     SQ       +P+  + K  +   G+ ++  +  
Sbjct: 313 VHGEAGVQSAQRATQILFGGELGDTTDSQLREIFADVPSCDVPKSALEGEGLWIVEALQT 372

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           A    S  +ARR L    + +NN+ + + + ++   D D    + L  GK+ + +  +
Sbjct: 373 AKLCNSGGDARRALSEGGVYVNNTRVEDVQKRLTADDLDGRSVLVLRRGKRKYALLKI 430


>gi|332090773|gb|EGI95865.1| tyrosyl-tRNA synthetase [Shigella boydii 5216-82]
          Length = 424

 Score =  306 bits (785), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 168/423 (39%), Positives = 246/423 (58%), Gaps = 15/423 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 4   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +QE ++KI+   + F+ +  G+  A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDCGENSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDF 184
            NN  W  ++  +  LR+IG  FSVN+M++ E+V+ RL RE Q +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNREDQGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K YD  LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 184 ACLNKQYDVVLQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  D DV  F K  T + + EI+ +    K  GK    A+ +
Sbjct: 244 VWLDPKKTSPYKFYQFWINTADVDVYRFLKFFTFMSIEEINALEEEDKNSGK-APRAQYV 302

Query: 302 IATEITTMVHGREEAEKAATAAMEC-FDMSIHS------QHMPTISISKDEVSRGMGLLT 354
           +A ++T +VHG EE  +AA    EC F  S+ +      + +    +   E+ +G  L+ 
Sbjct: 303 LAEQVTRLVHG-EEGLQAAKRITECLFSGSLSALSEADFEQLAQDGVPMVEMEKGADLMQ 361

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +V +    S  +AR+ + SNAI IN    S+ +   K +D        L  GKKN+  C
Sbjct: 362 ALVDSELQPSRGQARKTIASNAITINGEKQSDPEYFFKEEDRLFGRFTLLRRGKKNY--C 419

Query: 415 HLC 417
            +C
Sbjct: 420 LIC 422


>gi|82777111|ref|YP_403460.1| tyrosyl-tRNA synthetase [Shigella dysenteriae Sd197]
 gi|97201960|sp|Q32FD6|SYY_SHIDS RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|81241259|gb|ABB61969.1| tyrosine tRNA synthetase [Shigella dysenteriae Sd197]
          Length = 424

 Score =  306 bits (785), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 168/423 (39%), Positives = 247/423 (58%), Gaps = 15/423 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 4   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +QE ++KI+   + F+ +  G+  A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDCGENSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDF 184
            NN  W  ++  +  LR+IG  FSVN+M++ E+V+ RL RE Q +SF+EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNREDQGISFIEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K Y   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 184 ACLNKQYGVVLQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+ +    K  GK    A+ +
Sbjct: 244 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINALEEEDKNSGK-APRAQYV 302

Query: 302 IATEITTMVHGREEAEKAATAAMEC-FDMSIHS------QHMPTISISKDEVSRGMGLLT 354
           +A ++T +VHG EE  +AA    EC F  S+ +      + +    +   E+ +G  L+ 
Sbjct: 303 LAEQVTRLVHG-EEGLQAAKRITECLFSGSLSALSEADFEQLAQDGVPMVEMEKGADLMQ 361

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +V +    S  +AR+ + SNAI IN    S+ +   K +D        L  GKKN+  C
Sbjct: 362 ALVDSELQPSRGQARKTIASNAITINGEKQSDPEYFFKEEDRLFGRFTLLRRGKKNY--C 419

Query: 415 HLC 417
            +C
Sbjct: 420 LIC 422


>gi|260655484|ref|ZP_05860972.1| tyrosine--tRNA ligase [Jonquetella anthropi E3_33 E1]
 gi|260629932|gb|EEX48126.1| tyrosine--tRNA ligase [Jonquetella anthropi E3_33 E1]
          Length = 427

 Score =  306 bits (784), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 165/418 (39%), Positives = 238/418 (56%), Gaps = 11/418 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +D L  L ERG++   S+   L+ L  +G VTAY+G+D TA SLH GHL  LM L WLQK
Sbjct: 2   NDALKTLRERGYVDWCSDEEGLNALFEKGQVTAYVGFDPTADSLHVGHLIPLMGLAWLQK 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+PI L GGGT +IGDPS + + R ++  ++++ N+E IK   S  + +  G   AL+
Sbjct: 62  LGHRPILLAGGGTGMIGDPSMKSKERNLLSDEQVRRNVEGIKVQLSRLVDFDCGSASALL 121

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDF 184
           +NN  WL  +  ID LR++G FFSVN M+  E VRSR++   ++LS+ EF Y +LQAYDF
Sbjct: 122 VNNYDWLGKLNLIDFLRDVGKFFSVNYMIRKEHVRSRIEDPNKTLSYTEFTYTLLQAYDF 181

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K + CRLQMGG+DQ GN++ GI+L  +      +A T+PLL  +SGTK GKT  GA
Sbjct: 182 WHLFKTFGCRLQMGGNDQQGNLVSGIELIRKWDGETAYAATNPLLLNSSGTKFGKTEGGA 241

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM-AKLQGKEINE-AKKII 302
           +WL+ E TSPY F+Q+W N +D  V    K  T LP+ EID++ A+ Q       A++ +
Sbjct: 242 VWLSPEKTSPYKFYQFWMNSEDEAVEKLLKLFTFLPLEEIDQIVAEHQANPGRRAAQRRL 301

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHM--PTISISKDEVSRG------MGLLT 354
           A EIT+++HG E A+ A  A+   F   +    +  P +SI   E   G        L  
Sbjct: 302 ALEITSIIHGEEAAKAAQRASEILFGGQVAHDELTGPMLSIIASETEGGSIESLPCQLAE 361

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
            +V +G   S  E +R      + +N   +     ++   D     +  +  GKK + 
Sbjct: 362 ALVASGACASKGEVKRLTSGGGLYLNGDRVETSDRELTESDLLDGKHALVRLGKKKYF 419


>gi|301326605|ref|ZP_07219942.1| tyrosyl-tRNA synthetase [Escherichia coli MS 78-1]
 gi|300846722|gb|EFK74482.1| tyrosyl-tRNA synthetase [Escherichia coli MS 78-1]
          Length = 428

 Score =  306 bits (783), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 168/423 (39%), Positives = 246/423 (58%), Gaps = 15/423 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 8   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 67

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +QE ++KI+   + F+ +  G+  A+ 
Sbjct: 68  AGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDCGENSAIA 127

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDF 184
            NN  W  ++  +  LR+IG  FSVN+M++ E+V+ RL RE Q +SF EF+Y +LQ YDF
Sbjct: 128 ANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNREDQGISFTEFSYNLLQGYDF 187

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K Y   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 188 ACLNKQYGVVLQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEDGA 247

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+ +    K  GK    A+ +
Sbjct: 248 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINALEEEDKNSGK-APRAQYV 306

Query: 302 IATEITTMVHGREEAEKAATAAMEC-FDMSIHS------QHMPTISISKDEVSRGMGLLT 354
           +A ++T +VHG EE  +AA    EC F  S+ +      + +    +   E+ +G  L+ 
Sbjct: 307 LAEQVTRLVHG-EEGLQAAKRITECLFSGSLSALSEADFEQLAQDGVPMVEMEKGADLMQ 365

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +V +    S  +AR+ + SNAI IN    S+ +   K +D        L  GKKN+  C
Sbjct: 366 ALVDSELQPSRGQARKTIASNAITINGEKQSDPEYFFKEEDRLFGRFTLLRRGKKNY--C 423

Query: 415 HLC 417
            +C
Sbjct: 424 LIC 426


>gi|15802051|ref|NP_288073.1| tyrosyl-tRNA synthetase [Escherichia coli O157:H7 EDL933]
 gi|291282769|ref|YP_003499587.1| Tyrosyl-tRNA synthetase [Escherichia coli O55:H7 str. CB9615]
 gi|293414953|ref|ZP_06657596.1| tyrosyl-tRNA synthetase [Escherichia coli B185]
 gi|300821490|ref|ZP_07101637.1| tyrosyl-tRNA synthetase [Escherichia coli MS 119-7]
 gi|300901554|ref|ZP_07119624.1| tyrosyl-tRNA synthetase [Escherichia coli MS 198-1]
 gi|300904483|ref|ZP_07122325.1| tyrosyl-tRNA synthetase [Escherichia coli MS 84-1]
 gi|300918002|ref|ZP_07134626.1| tyrosyl-tRNA synthetase [Escherichia coli MS 115-1]
 gi|300924666|ref|ZP_07140616.1| tyrosyl-tRNA synthetase [Escherichia coli MS 182-1]
 gi|300951219|ref|ZP_07165074.1| tyrosyl-tRNA synthetase [Escherichia coli MS 116-1]
 gi|300958509|ref|ZP_07170644.1| tyrosyl-tRNA synthetase [Escherichia coli MS 175-1]
 gi|300987923|ref|ZP_07178444.1| tyrosyl-tRNA synthetase [Escherichia coli MS 200-1]
 gi|301026794|ref|ZP_07190198.1| tyrosyl-tRNA synthetase [Escherichia coli MS 69-1]
 gi|301303150|ref|ZP_07209276.1| tyrosyl-tRNA synthetase [Escherichia coli MS 124-1]
 gi|301647814|ref|ZP_07247600.1| tyrosyl-tRNA synthetase [Escherichia coli MS 146-1]
 gi|331642230|ref|ZP_08343365.1| tyrosine--tRNA ligase [Escherichia coli H736]
 gi|331647126|ref|ZP_08348220.1| tyrosine--tRNA ligase [Escherichia coli M605]
 gi|331653033|ref|ZP_08354038.1| tyrosine--tRNA ligase [Escherichia coli M718]
 gi|331673205|ref|ZP_08373973.1| tyrosine--tRNA ligase [Escherichia coli TA280]
 gi|331677503|ref|ZP_08378178.1| tyrosine--tRNA ligase [Escherichia coli H591]
 gi|332279216|ref|ZP_08391629.1| tyrosyl-tRNA synthetase [Shigella sp. D9]
 gi|25292889|pir||F85770 tyrosine tRNA synthetase [imported] - Escherichia coli  (strain
           O157:H7, substrain EDL933)
 gi|12515629|gb|AAG56626.1|AE005387_4 tyrosine tRNA synthetase [Escherichia coli O157:H7 str. EDL933]
 gi|209769578|gb|ACI83101.1| tyrosine tRNA synthetase [Escherichia coli]
 gi|209769580|gb|ACI83102.1| tyrosine tRNA synthetase [Escherichia coli]
 gi|209769582|gb|ACI83103.1| tyrosine tRNA synthetase [Escherichia coli]
 gi|209769584|gb|ACI83104.1| tyrosine tRNA synthetase [Escherichia coli]
 gi|209769586|gb|ACI83105.1| tyrosine tRNA synthetase [Escherichia coli]
 gi|284921562|emb|CBG34634.1| tyrosyl-tRNA synthetase [Escherichia coli 042]
 gi|290762642|gb|ADD56603.1| Tyrosyl-tRNA synthetase [Escherichia coli O55:H7 str. CB9615]
 gi|291432601|gb|EFF05580.1| tyrosyl-tRNA synthetase [Escherichia coli B185]
 gi|300305997|gb|EFJ60517.1| tyrosyl-tRNA synthetase [Escherichia coli MS 200-1]
 gi|300314825|gb|EFJ64609.1| tyrosyl-tRNA synthetase [Escherichia coli MS 175-1]
 gi|300355042|gb|EFJ70912.1| tyrosyl-tRNA synthetase [Escherichia coli MS 198-1]
 gi|300395332|gb|EFJ78870.1| tyrosyl-tRNA synthetase [Escherichia coli MS 69-1]
 gi|300403579|gb|EFJ87117.1| tyrosyl-tRNA synthetase [Escherichia coli MS 84-1]
 gi|300414799|gb|EFJ98109.1| tyrosyl-tRNA synthetase [Escherichia coli MS 115-1]
 gi|300419155|gb|EFK02466.1| tyrosyl-tRNA synthetase [Escherichia coli MS 182-1]
 gi|300449509|gb|EFK13129.1| tyrosyl-tRNA synthetase [Escherichia coli MS 116-1]
 gi|300525993|gb|EFK47062.1| tyrosyl-tRNA synthetase [Escherichia coli MS 119-7]
 gi|300841559|gb|EFK69319.1| tyrosyl-tRNA synthetase [Escherichia coli MS 124-1]
 gi|301074058|gb|EFK88864.1| tyrosyl-tRNA synthetase [Escherichia coli MS 146-1]
 gi|315257562|gb|EFU37530.1| tyrosyl-tRNA synthetase [Escherichia coli MS 85-1]
 gi|315299669|gb|EFU58911.1| tyrosyl-tRNA synthetase [Escherichia coli MS 16-3]
 gi|324011400|gb|EGB80619.1| tyrosyl-tRNA synthetase [Escherichia coli MS 60-1]
 gi|324016573|gb|EGB85792.1| tyrosyl-tRNA synthetase [Escherichia coli MS 117-3]
 gi|331039028|gb|EGI11248.1| tyrosine--tRNA ligase [Escherichia coli H736]
 gi|331043909|gb|EGI16045.1| tyrosine--tRNA ligase [Escherichia coli M605]
 gi|331049131|gb|EGI21203.1| tyrosine--tRNA ligase [Escherichia coli M718]
 gi|331069403|gb|EGI40790.1| tyrosine--tRNA ligase [Escherichia coli TA280]
 gi|331073963|gb|EGI45283.1| tyrosine--tRNA ligase [Escherichia coli H591]
 gi|332101568|gb|EGJ04914.1| tyrosyl-tRNA synthetase [Shigella sp. D9]
          Length = 428

 Score =  305 bits (782), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 168/423 (39%), Positives = 246/423 (58%), Gaps = 15/423 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 8   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 67

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +QE ++KI+   + F+ +  G+  A+ 
Sbjct: 68  AGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDCGENSAIA 127

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDF 184
            NN  W  ++  +  LR+IG  FSVN+M++ E+V+ RL RE Q +SF EF+Y +LQ YDF
Sbjct: 128 ANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNREDQGISFTEFSYNLLQGYDF 187

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K Y   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 188 ACLNKQYGVVLQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 247

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+ +    K  GK    A+ +
Sbjct: 248 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINALEEEDKNSGK-APRAQYV 306

Query: 302 IATEITTMVHGREEAEKAATAAMEC-FDMSIHS------QHMPTISISKDEVSRGMGLLT 354
           +A ++T +VHG EE  +AA    EC F  S+ +      + +    +   E+ +G  L+ 
Sbjct: 307 LAEQVTRLVHG-EEGLQAAKRITECLFSGSLSALSEADFEQLAQDGVPMVEMEKGADLMQ 365

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +V +    S  +AR+ + SNAI IN    S+ +   K +D        L  GKKN+  C
Sbjct: 366 ALVDSELQPSRGQARKTIASNAITINGEKQSDPEYFFKEEDRLFGRFTLLRRGKKNY--C 423

Query: 415 HLC 417
            +C
Sbjct: 424 LIC 426


>gi|320652603|gb|EFX20872.1| tyrosyl-tRNA synthetase [Escherichia coli O157:H- str. H 2687]
          Length = 424

 Score =  305 bits (782), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 168/423 (39%), Positives = 246/423 (58%), Gaps = 15/423 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 4   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +QE ++KI+   + F+ +  G+  A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDCGENSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDF 184
            NN  W  ++  +  LR+IG  FSVN+M++ E+V+ RL RE Q +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNREEQGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K Y   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 184 ACLNKQYGVVLQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+ +    K  GK    A+ +
Sbjct: 244 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINALEEEDKNSGK-APRAQYV 302

Query: 302 IATEITTMVHGREEAEKAATAAMEC-FDMSIHS------QHMPTISISKDEVSRGMGLLT 354
           +A ++T +VHG EE  +AA    EC F  S+ +      + +    +   E+ +G  L+ 
Sbjct: 303 LAEQVTRLVHG-EEGLQAAKRITECLFSGSLSALSEADFEQLAQDGVPMVEMEKGADLMQ 361

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +V +    S  +AR+ + SNAI IN    S+ +   K +D        L  GKKN+  C
Sbjct: 362 ALVDSELQPSRGQARKTIASNAITINGEKQSDPEYFFKEEDRLFGRFTLLRRGKKNY--C 419

Query: 415 HLC 417
            +C
Sbjct: 420 LIC 422


>gi|168771181|ref|ZP_02796188.1| tyrosyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4486]
 gi|189360026|gb|EDU78445.1| tyrosyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4486]
          Length = 424

 Score =  305 bits (782), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 168/421 (39%), Positives = 246/421 (58%), Gaps = 14/421 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 4   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +QE ++KI+   + F+ +  G+  A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDCGENSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDF 184
            NN  W  ++  +  LR+IG  FSVN+M++ E+V+ RL RE Q +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNREDQGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K Y   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 184 ACLNKQYGVVLQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+ +    K  GK    A+ +
Sbjct: 244 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINALEEEDKNSGK-APRAQYV 302

Query: 302 IATEITTMVHGREEAEKAATAAMEC-FDMSIHS------QHMPTISISKDEVSRGMGLLT 354
           +A ++T +VHG EE  +AA    EC F  S+ +      + +    +   E+ +G  L+ 
Sbjct: 303 LAEQVTRLVHG-EEGLQAAKRITECLFSGSLSALSEADFEQLAQDGVPMVEMEKGADLMQ 361

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH-II 413
            +V +    S  +AR+ + SNAI IN    S+ +   K +D        L  GKKN+ +I
Sbjct: 362 ALVDSELQPSRGQARKTIASNAITINGEKQSDPEYFFKEEDRLFGRFTLLRRGKKNYCVI 421

Query: 414 C 414
           C
Sbjct: 422 C 422


>gi|315640615|ref|ZP_07895721.1| tyrosine--tRNA ligase [Enterococcus italicus DSM 15952]
 gi|315483643|gb|EFU74133.1| tyrosine--tRNA ligase [Enterococcus italicus DSM 15952]
          Length = 428

 Score =  305 bits (782), Expect = 7e-81,   Method: Compositional matrix adjust.
 Identities = 165/420 (39%), Positives = 248/420 (59%), Gaps = 17/420 (4%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           SDF   L +RG + Q ++   L+   ++  V  Y+G+D TA SLH GHL  +++L   Q 
Sbjct: 10  SDFFQELKDRGLVFQTTDEAALEKQLNEESVKLYVGFDPTADSLHIGHLLPILMLRRFQL 69

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH PI+L+GGGT +IGDPSF+D+ R++     +QE  + IK   S FI +   K  A++
Sbjct: 70  QGHVPIALVGGGTGMIGDPSFKDQERQLNTLSIVQEWSQSIKDQLSRFIDFDDEKAPAVL 129

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
            NN  WL SI  ID LR++G  F++N M+S ESV+ R+  E  +S+ EF Y +LQAYDF+
Sbjct: 130 ANNYDWLGSISLIDFLRDVGKNFTINYMMSKESVKRRI--ESGISYTEFAYQLLQAYDFL 187

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           +L +N+ C LQ+GGSDQWGNI  GI+L  R K  + F LT PL+T A GTK GKT   A+
Sbjct: 188 KLYENHGCLLQLGGSDQWGNITSGIELLRREKEVQGFGLTMPLITKADGTKFGKTEGNAV 247

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIA 303
           WL+ E T+PY F+Q+W N DD DV+ F K  T L ++EI  + +      E   A+K +A
Sbjct: 248 WLDPEKTTPYEFYQFWINTDDRDVIKFLKYFTFLSLTEITAIEQEFTAAPESRVAQKALA 307

Query: 304 TEITTMVHGREEAEKAATAAMECF----------DMSIHSQHMPTISISKDEVSRGMGLL 353
            E+TT+VHG E+  +A   +   F          ++S   + +P+  I+ ++   G  LL
Sbjct: 308 KEVTTLVHGEEKYRQAVHISQALFSGELKTLSSEEISQGFKGVPSYEITTED---GSQLL 364

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            L+V +   +S  +AR  L++ AI +N   I +   +++ +D  S  +  +  GKK + +
Sbjct: 365 DLLVASKIVSSRRQAREDLQNGAIYVNGDRIQSVDYELREEDKLSGKHTIIRRGKKKYFL 424


>gi|15831600|ref|NP_310373.1| tyrosyl-tRNA synthetase [Escherichia coli O157:H7 str. Sakai]
 gi|16129595|ref|NP_416154.1| tyrosyl-tRNA synthetase [Escherichia coli str. K-12 substr. MG1655]
 gi|74312035|ref|YP_310454.1| tyrosyl-tRNA synthetase [Shigella sonnei Ss046]
 gi|89108479|ref|AP_002259.1| tyrosyl-tRNA synthetase [Escherichia coli str. K-12 substr. W3110]
 gi|157157482|ref|YP_001462928.1| tyrosyl-tRNA synthetase [Escherichia coli E24377A]
 gi|157161099|ref|YP_001458417.1| tyrosyl-tRNA synthetase [Escherichia coli HS]
 gi|168775869|ref|ZP_02800876.1| tyrosyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4196]
 gi|168783462|ref|ZP_02808469.1| tyrosyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4076]
 gi|168789476|ref|ZP_02814483.1| tyrosyl-tRNA synthetase [Escherichia coli O157:H7 str. EC869]
 gi|170020011|ref|YP_001724965.1| tyrosyl-tRNA synthetase [Escherichia coli ATCC 8739]
 gi|170081301|ref|YP_001730621.1| tyrosyl-tRNA synthetase [Escherichia coli str. K-12 substr. DH10B]
 gi|170683918|ref|YP_001743617.1| tyrosyl-tRNA synthetase [Escherichia coli SMS-3-5]
 gi|187731260|ref|YP_001880393.1| tyrosyl-tRNA synthetase [Shigella boydii CDC 3083-94]
 gi|188495334|ref|ZP_03002604.1| tyrosyl-tRNA synthetase [Escherichia coli 53638]
 gi|191173441|ref|ZP_03034969.1| tyrosyl-tRNA synthetase [Escherichia coli F11]
 gi|193070259|ref|ZP_03051203.1| tyrosyl-tRNA synthetase [Escherichia coli E110019]
 gi|208810466|ref|ZP_03252342.1| tyrosyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4206]
 gi|208816760|ref|ZP_03257880.1| tyrosyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4045]
 gi|208821747|ref|ZP_03262067.1| tyrosyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4042]
 gi|209398956|ref|YP_002270707.1| tyrosyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4115]
 gi|209918951|ref|YP_002293035.1| tyrosyl-tRNA synthetase [Escherichia coli SE11]
 gi|217328817|ref|ZP_03444898.1| tyrosyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14588]
 gi|218699794|ref|YP_002407423.1| tyrosyl-tRNA synthetase [Escherichia coli IAI39]
 gi|218705138|ref|YP_002412657.1| tyrosyl-tRNA synthetase [Escherichia coli UMN026]
 gi|238900853|ref|YP_002926649.1| tyrosyl-tRNA synthetase [Escherichia coli BW2952]
 gi|254793254|ref|YP_003078091.1| tyrosyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14359]
 gi|256018168|ref|ZP_05432033.1| tyrosyl-tRNA synthetase [Shigella sp. D9]
 gi|256022700|ref|ZP_05436565.1| tyrosyl-tRNA synthetase [Escherichia sp. 4_1_40B]
 gi|260843943|ref|YP_003221721.1| tyrosyl-tRNA synthetase [Escherichia coli O103:H2 str. 12009]
 gi|260855462|ref|YP_003229353.1| tyrosyl-tRNA synthetase [Escherichia coli O26:H11 str. 11368]
 gi|260868129|ref|YP_003234531.1| tyrosyl-tRNA synthetase [Escherichia coli O111:H- str. 11128]
 gi|261227917|ref|ZP_05942198.1| tyrosyl-tRNA synthetase [Escherichia coli O157:H7 str. FRIK2000]
 gi|261258349|ref|ZP_05950882.1| tyrosyl-tRNA synthetase [Escherichia coli O157:H7 str. FRIK966]
 gi|293405137|ref|ZP_06649129.1| tyrosyl-tRNA synthetase [Escherichia coli FVEC1412]
 gi|293409950|ref|ZP_06653526.1| tyrosyl-tRNA synthetase [Escherichia coli B354]
 gi|298380784|ref|ZP_06990383.1| tyrosyl-tRNA synthetase [Escherichia coli FVEC1302]
 gi|301027691|ref|ZP_07191005.1| tyrosyl-tRNA synthetase [Escherichia coli MS 196-1]
 gi|307138293|ref|ZP_07497649.1| tyrosyl-tRNA synthetase [Escherichia coli H736]
 gi|307310790|ref|ZP_07590436.1| tyrosyl-tRNA synthetase [Escherichia coli W]
 gi|309788396|ref|ZP_07683000.1| tyrosyl-tRNA synthetase [Shigella dysenteriae 1617]
 gi|312969658|ref|ZP_07783841.1| tyrosyl-tRNA synthetase [Escherichia coli 1827-70]
 gi|331657609|ref|ZP_08358571.1| tyrosine--tRNA ligase [Escherichia coli TA206]
 gi|331663109|ref|ZP_08364019.1| tyrosine--tRNA ligase [Escherichia coli TA143]
 gi|331668315|ref|ZP_08369163.1| tyrosine--tRNA ligase [Escherichia coli TA271]
 gi|331683145|ref|ZP_08383746.1| tyrosine--tRNA ligase [Escherichia coli H299]
 gi|84028838|sp|P0AGK0|SYY_ECO57 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|84028839|sp|P0AGJ9|SYY_ECOLI RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|97201988|sp|Q3Z1Z3|SYY_SHISS RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|189083649|sp|A7ZM99|SYY_ECO24 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|189083650|sp|A8A0I0|SYY_ECOHS RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|189083652|sp|B1IQB7|SYY_ECOLC RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|254783598|sp|B5Z471|SYY_ECO5E RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|254783599|sp|B7NTZ5|SYY_ECO7I RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|254783602|sp|B1XFU9|SYY_ECODH RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|254783603|sp|B7NB91|SYY_ECOLU RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|254783604|sp|B6IB76|SYY_ECOSE RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|254783605|sp|B1LEP9|SYY_ECOSM RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|254783636|sp|B2U2D7|SYY_SHIB3 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|259516991|sp|C4ZYA0|SYY_ECOBW RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|148094|gb|AAA24707.1| tyrosyl-tRNA synthetase (tyrS) [Escherichia coli]
 gi|1787925|gb|AAC74709.1| tyrosyl-tRNA synthetase [Escherichia coli str. K-12 substr. MG1655]
 gi|13361813|dbj|BAB35769.1| tyrosine tRNA synthetase [Escherichia coli O157:H7 str. Sakai]
 gi|73855512|gb|AAZ88219.1| tyrosine tRNA synthetase [Shigella sonnei Ss046]
 gi|85675050|dbj|BAA15398.2| tyrosyl-tRNA synthetase [Escherichia coli str. K12 substr. W3110]
 gi|157066779|gb|ABV06034.1| tyrosyl-tRNA synthetase [Escherichia coli HS]
 gi|157079512|gb|ABV19220.1| tyrosyl-tRNA synthetase [Escherichia coli E24377A]
 gi|169754939|gb|ACA77638.1| tyrosyl-tRNA synthetase [Escherichia coli ATCC 8739]
 gi|169889136|gb|ACB02843.1| tyrosyl-tRNA synthetase [Escherichia coli str. K-12 substr. DH10B]
 gi|170521636|gb|ACB19814.1| tyrosyl-tRNA synthetase [Escherichia coli SMS-3-5]
 gi|187428252|gb|ACD07526.1| tyrosyl-tRNA synthetase [Shigella boydii CDC 3083-94]
 gi|187768721|gb|EDU32565.1| tyrosyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4196]
 gi|188490533|gb|EDU65636.1| tyrosyl-tRNA synthetase [Escherichia coli 53638]
 gi|188999202|gb|EDU68188.1| tyrosyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4076]
 gi|189370947|gb|EDU89363.1| tyrosyl-tRNA synthetase [Escherichia coli O157:H7 str. EC869]
 gi|190906283|gb|EDV65894.1| tyrosyl-tRNA synthetase [Escherichia coli F11]
 gi|192956440|gb|EDV86899.1| tyrosyl-tRNA synthetase [Escherichia coli E110019]
 gi|208724982|gb|EDZ74689.1| tyrosyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4206]
 gi|208731103|gb|EDZ79792.1| tyrosyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4045]
 gi|208741870|gb|EDZ89552.1| tyrosyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4042]
 gi|209160356|gb|ACI37789.1| tyrosyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4115]
 gi|209912210|dbj|BAG77284.1| tyrosyl-tRNA synthase [Escherichia coli SE11]
 gi|217318164|gb|EEC26591.1| tyrosyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14588]
 gi|218369780|emb|CAR17551.1| tyrosyl-tRNA synthetase [Escherichia coli IAI39]
 gi|218432235|emb|CAR13125.1| tyrosyl-tRNA synthetase [Escherichia coli UMN026]
 gi|238863733|gb|ACR65731.1| tyrosyl-tRNA synthetase [Escherichia coli BW2952]
 gi|254592654|gb|ACT72015.1| tyrosyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14359]
 gi|257754111|dbj|BAI25613.1| tyrosyl-tRNA synthetase [Escherichia coli O26:H11 str. 11368]
 gi|257759090|dbj|BAI30587.1| tyrosyl-tRNA synthetase [Escherichia coli O103:H2 str. 12009]
 gi|257764485|dbj|BAI35980.1| tyrosyl-tRNA synthetase [Escherichia coli O111:H- str. 11128]
 gi|260449238|gb|ACX39660.1| tyrosyl-tRNA synthetase [Escherichia coli DH1]
 gi|281178710|dbj|BAI55040.1| tyrosyl-tRNA synthetase [Escherichia coli SE15]
 gi|291427345|gb|EFF00372.1| tyrosyl-tRNA synthetase [Escherichia coli FVEC1412]
 gi|291470418|gb|EFF12902.1| tyrosyl-tRNA synthetase [Escherichia coli B354]
 gi|298278226|gb|EFI19740.1| tyrosyl-tRNA synthetase [Escherichia coli FVEC1302]
 gi|299879184|gb|EFI87395.1| tyrosyl-tRNA synthetase [Escherichia coli MS 196-1]
 gi|306908968|gb|EFN39464.1| tyrosyl-tRNA synthetase [Escherichia coli W]
 gi|308923778|gb|EFP69281.1| tyrosyl-tRNA synthetase [Shigella dysenteriae 1617]
 gi|309701864|emb|CBJ01176.1| tyrosyl-tRNA synthetase [Escherichia coli ETEC H10407]
 gi|310337943|gb|EFQ03032.1| tyrosyl-tRNA synthetase [Escherichia coli 1827-70]
 gi|315060945|gb|ADT75272.1| tyrosyl-tRNA synthetase [Escherichia coli W]
 gi|315136278|dbj|BAJ43437.1| tyrosyl-tRNA synthetase [Escherichia coli DH1]
 gi|315618827|gb|EFU99410.1| tyrosyl-tRNA synthetase [Escherichia coli 3431]
 gi|320186309|gb|EFW61045.1| tyrosyl-tRNA synthetase [Shigella flexneri CDC 796-83]
 gi|320188324|gb|EFW62986.1| tyrosyl-tRNA synthetase [Escherichia coli O157:H7 str. EC1212]
 gi|320195465|gb|EFW70090.1| tyrosyl-tRNA synthetase [Escherichia coli WV_060327]
 gi|320647309|gb|EFX16117.1| tyrosyl-tRNA synthetase [Escherichia coli O157:H- str. 493-89]
 gi|320652989|gb|EFX21185.1| tyrosyl-tRNA synthetase [Escherichia coli O55:H7 str. 3256-97 TW
           07815]
 gi|320658672|gb|EFX26349.1| tyrosyl-tRNA synthetase [Escherichia coli O55:H7 str. USDA 5905]
 gi|320668662|gb|EFX35467.1| tyrosyl-tRNA synthetase [Escherichia coli O157:H7 str. LSU-61]
 gi|323152858|gb|EFZ39128.1| tyrosyl-tRNA synthetase [Escherichia coli EPECa14]
 gi|323163514|gb|EFZ49340.1| tyrosyl-tRNA synthetase [Escherichia coli E128010]
 gi|323169198|gb|EFZ54874.1| tyrosyl-tRNA synthetase [Shigella sonnei 53G]
 gi|323169944|gb|EFZ55600.1| tyrosyl-tRNA synthetase [Escherichia coli LT-68]
 gi|323180952|gb|EFZ66490.1| tyrosyl-tRNA synthetase [Escherichia coli 1180]
 gi|323186090|gb|EFZ71446.1| tyrosyl-tRNA synthetase [Escherichia coli 1357]
 gi|323378484|gb|ADX50752.1| tyrosyl-tRNA synthetase [Escherichia coli KO11]
 gi|323937243|gb|EGB33522.1| tyrosyl-tRNA synthetase [Escherichia coli E1520]
 gi|323940694|gb|EGB36885.1| tyrosyl-tRNA synthetase [Escherichia coli E482]
 gi|323948066|gb|EGB44058.1| tyrosyl-tRNA synthetase [Escherichia coli H120]
 gi|323968405|gb|EGB63811.1| tyrosyl-tRNA synthetase [Escherichia coli M863]
 gi|323978223|gb|EGB73309.1| tyrosyl-tRNA synthetase [Escherichia coli TW10509]
 gi|324119124|gb|EGC13012.1| tyrosyl-tRNA synthetase [Escherichia coli E1167]
 gi|326342004|gb|EGD65785.1| tyrosyl-tRNA synthetase [Escherichia coli O157:H7 str. 1044]
 gi|326343555|gb|EGD67317.1| tyrosyl-tRNA synthetase [Escherichia coli O157:H7 str. 1125]
 gi|327252753|gb|EGE64407.1| tyrosyl-tRNA synthetase [Escherichia coli STEC_7v]
 gi|330911444|gb|EGH39954.1| tyrosyl-tRNA synthetase [Escherichia coli AA86]
 gi|331055857|gb|EGI27866.1| tyrosine--tRNA ligase [Escherichia coli TA206]
 gi|331058908|gb|EGI30885.1| tyrosine--tRNA ligase [Escherichia coli TA143]
 gi|331063509|gb|EGI35420.1| tyrosine--tRNA ligase [Escherichia coli TA271]
 gi|331079360|gb|EGI50557.1| tyrosine--tRNA ligase [Escherichia coli H299]
 gi|332096089|gb|EGJ01094.1| tyrosyl-tRNA synthetase [Shigella boydii 3594-74]
 gi|332343355|gb|AEE56689.1| tyrosyl-tRNA synthetase TyrS [Escherichia coli UMNK88]
          Length = 424

 Score =  305 bits (782), Expect = 7e-81,   Method: Compositional matrix adjust.
 Identities = 168/423 (39%), Positives = 246/423 (58%), Gaps = 15/423 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 4   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +QE ++KI+   + F+ +  G+  A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDCGENSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDF 184
            NN  W  ++  +  LR+IG  FSVN+M++ E+V+ RL RE Q +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNREDQGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K Y   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 184 ACLNKQYGVVLQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+ +    K  GK    A+ +
Sbjct: 244 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINALEEEDKNSGK-APRAQYV 302

Query: 302 IATEITTMVHGREEAEKAATAAMEC-FDMSIHS------QHMPTISISKDEVSRGMGLLT 354
           +A ++T +VHG EE  +AA    EC F  S+ +      + +    +   E+ +G  L+ 
Sbjct: 303 LAEQVTRLVHG-EEGLQAAKRITECLFSGSLSALSEADFEQLAQDGVPMVEMEKGADLMQ 361

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +V +    S  +AR+ + SNAI IN    S+ +   K +D        L  GKKN+  C
Sbjct: 362 ALVDSELQPSRGQARKTIASNAITINGEKQSDPEYFFKEEDRLFGRFTLLRRGKKNY--C 419

Query: 415 HLC 417
            +C
Sbjct: 420 LIC 422


>gi|218554205|ref|YP_002387118.1| tyrosyl-tRNA synthetase [Escherichia coli IAI1]
 gi|254783601|sp|B7M0J4|SYY_ECO8A RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|218360973|emb|CAQ98546.1| tyrosyl-tRNA synthetase [Escherichia coli IAI1]
          Length = 424

 Score =  305 bits (781), Expect = 8e-81,   Method: Compositional matrix adjust.
 Identities = 168/423 (39%), Positives = 246/423 (58%), Gaps = 15/423 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 4   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +QE ++KI+   + F+ +  G+  A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDCGENSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDF 184
            NN  W  ++  +  LR+IG  FSVN+M++ E+V+ RL RE Q +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNREDQGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K Y   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 184 ACLNKQYGVVLQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+ +    K  GK    A+ +
Sbjct: 244 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINTLEEEDKNSGK-APRAQYV 302

Query: 302 IATEITTMVHGREEAEKAATAAMEC-FDMSIHS------QHMPTISISKDEVSRGMGLLT 354
           +A ++T +VHG EE  +AA    EC F  S+ +      + +    +   E+ +G  L+ 
Sbjct: 303 LAEQVTRLVHG-EEGLQAAKRITECLFSGSLSALSEADFEQLAQDGVPMVEMEKGADLMQ 361

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +V +    S  +AR+ + SNAI IN    S+ +   K +D        L  GKKN+  C
Sbjct: 362 ALVDSELQPSRGQARKTIASNAITINGEKQSDPEYFFKEEDRLFGRFTLLRRGKKNY--C 419

Query: 415 HLC 417
            +C
Sbjct: 420 LIC 422


>gi|320641992|gb|EFX11356.1| tyrosyl-tRNA synthetase [Escherichia coli O157:H7 str. G5101]
          Length = 424

 Score =  305 bits (781), Expect = 8e-81,   Method: Compositional matrix adjust.
 Identities = 168/423 (39%), Positives = 246/423 (58%), Gaps = 15/423 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 4   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +QE ++KI+   + F+ +  G+  A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDCGENSAIT 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDF 184
            NN  W  ++  +  LR+IG  FSVN+M++ E+V+ RL RE Q +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNREDQGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K Y   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 184 ACLNKQYGVVLQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+ +    K  GK    A+ +
Sbjct: 244 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINALEEEDKNSGK-APRAQYV 302

Query: 302 IATEITTMVHGREEAEKAATAAMEC-FDMSIHS------QHMPTISISKDEVSRGMGLLT 354
           +A ++T +VHG EE  +AA    EC F  S+ +      + +    +   E+ +G  L+ 
Sbjct: 303 LAEQVTRLVHG-EEGLQAAKRITECLFSGSLSALSEADFEQLAQDGVPMVEMEKGADLMQ 361

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +V +    S  +AR+ + SNAI IN    S+ +   K +D        L  GKKN+  C
Sbjct: 362 ALVDSELQPSRGQARKTIASNAITINGEKQSDPEYFFKEEDRLFGRFTLLRRGKKNY--C 419

Query: 415 HLC 417
            +C
Sbjct: 420 LIC 422


>gi|170768726|ref|ZP_02903179.1| tyrosyl-tRNA synthetase [Escherichia albertii TW07627]
 gi|170122274|gb|EDS91205.1| tyrosyl-tRNA synthetase [Escherichia albertii TW07627]
          Length = 424

 Score =  305 bits (781), Expect = 9e-81,   Method: Compositional matrix adjust.
 Identities = 167/423 (39%), Positives = 246/423 (58%), Gaps = 15/423 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 4   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +QE ++KI+   + F+ +  G+  A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDCGENSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDF 184
            NN  W  ++  +  LR+IG  FSVN+M++ E+V+ RL RE Q +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNREDQGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K Y   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 184 ACLNKQYGVTLQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+ +    K  GK    A+ +
Sbjct: 244 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINALEEEDKNSGK-APRAQYV 302

Query: 302 IATEITTMVHGREEAEKAATAAMEC-FDMSIHS------QHMPTISISKDEVSRGMGLLT 354
           +A ++T +VHG EE  +AA    EC F  S+ +      + +    +   E+ +G  L+ 
Sbjct: 303 LAEQVTRLVHG-EEGLQAAKRITECLFSGSLSALSEADFEQLAQDGVPMVEMEKGADLMQ 361

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +V +    S  +AR+ + SNAI IN    ++ +   K +D        L  GKKN+  C
Sbjct: 362 ALVDSELQPSRGQARKTIASNAITINGEKQTDPEYFFKEEDRLFGRYTLLRRGKKNY--C 419

Query: 415 HLC 417
            +C
Sbjct: 420 LIC 422


>gi|320174157|gb|EFW49322.1| tyrosyl-tRNA synthetase [Shigella dysenteriae CDC 74-1112]
          Length = 424

 Score =  305 bits (781), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 168/423 (39%), Positives = 246/423 (58%), Gaps = 15/423 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 4   SNLIKQLQERGLVAQMTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +QE ++KI+   + F+ +  G+  A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDCGENSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDF 184
            NN  W  ++  +  LR+IG  FSVN+M++ E+V+ RL RE Q +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNREDQGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K Y   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 184 ACLNKQYGVVLQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+ +    K  GK    A+ +
Sbjct: 244 VWLDPKKTSPYKFYQFWLNTADADVYRFLKFFTFMSIEEINALEEEDKNSGK-APRAQYV 302

Query: 302 IATEITTMVHGREEAEKAATAAMEC-FDMSIHS------QHMPTISISKDEVSRGMGLLT 354
           +A ++T +VHG EE  +AA    EC F  S+ +      + +    +   E+ +G  L+ 
Sbjct: 303 LAEQVTRLVHG-EEGLQAAKRITECLFSGSLSALSEADFEQLAQDGVPMVEMEKGADLMQ 361

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +V +    S  +AR+ + SNAI IN    S+ +   K +D        L  GKKN+  C
Sbjct: 362 ALVDSELQPSRGQARKTIASNAITINGEKQSDPEYFFKEEDRLFGRFTLLRRGKKNY--C 419

Query: 415 HLC 417
            +C
Sbjct: 420 LIC 422


>gi|193064961|ref|ZP_03046037.1| tyrosyl-tRNA synthetase [Escherichia coli E22]
 gi|192927448|gb|EDV82066.1| tyrosyl-tRNA synthetase [Escherichia coli E22]
          Length = 424

 Score =  305 bits (780), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 168/423 (39%), Positives = 246/423 (58%), Gaps = 15/423 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 4   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +QE ++KI+   + F+ +  G+  A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDCGENSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDF 184
            NN  W  ++  +  LR+IG  FSVN+M++ E+V+ RL RE Q +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNREDQGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K Y   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 184 ACLNKQYGVVLQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+ +    K  GK    A+ +
Sbjct: 244 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMNIEEINALEEEDKNSGK-APRAQYV 302

Query: 302 IATEITTMVHGREEAEKAATAAMEC-FDMSIHS------QHMPTISISKDEVSRGMGLLT 354
           +A ++T +VHG EE  +AA    EC F  S+ +      + +    +   E+ +G  L+ 
Sbjct: 303 LAEQVTRLVHG-EEGLQAAKRITECLFSGSLSALSEADFEQLAQDGVPMVEMEKGADLMQ 361

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +V +    S  +AR+ + SNAI IN    S+ +   K +D        L  GKKN+  C
Sbjct: 362 ALVDSELQPSRGQARKTIASNAITINGEKQSDPEYFFKEEDRLFGRFTLLRRGKKNY--C 419

Query: 415 HLC 417
            +C
Sbjct: 420 LIC 422


>gi|195939027|ref|ZP_03084409.1| tyrosyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4024]
          Length = 428

 Score =  305 bits (780), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 168/423 (39%), Positives = 246/423 (58%), Gaps = 15/423 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 8   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 67

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +QE ++KI+   + F+ +  G+  A+ 
Sbjct: 68  AGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDCGENSAIA 127

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDF 184
            NN  W  ++  +  LR+IG  FSVN+M++ E+V+ RL RE Q +SF EF+Y +LQ YDF
Sbjct: 128 ANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNREDQGISFTEFSYNLLQGYDF 187

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K Y   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 188 ACLNKQYGVVLQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 247

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+ +    K  GK    A+ +
Sbjct: 248 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINALEEEDKNSGK-APRAQYV 306

Query: 302 IATEITTMVHGREEAEKAATAAMEC-FDMSIHS------QHMPTISISKDEVSRGMGLLT 354
           +A ++T +VHG EE  +AA    EC F  S+ +      + +    +   E+ +G  L+ 
Sbjct: 307 LAEQVTRLVHG-EEGLQAAKRITECLFSGSLSALSEADFEQLVQDGLPMVEIEKGADLMQ 365

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +V +    S  +AR+ + SNAI IN    S+ +   K +D        L  GKKN+  C
Sbjct: 366 AMVDSELQPSRGQARKTIASNAITINGEKQSDPEYFFKEEDRLFGRFTLLRRGKKNY--C 423

Query: 415 HLC 417
            +C
Sbjct: 424 LIC 426


>gi|300939046|ref|ZP_07153740.1| tyrosyl-tRNA synthetase [Escherichia coli MS 21-1]
 gi|300456035|gb|EFK19528.1| tyrosyl-tRNA synthetase [Escherichia coli MS 21-1]
          Length = 428

 Score =  304 bits (779), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 167/423 (39%), Positives = 246/423 (58%), Gaps = 15/423 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 8   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 67

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +QE ++KI+   + F+ +  G+  A+ 
Sbjct: 68  AGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDCGENSAIA 127

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDF 184
            NN  W  ++  +  LR+IG  FSVN+M++ E+V+ RL RE Q +SF EF+Y +LQ YDF
Sbjct: 128 ANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNREDQGISFTEFSYNLLQGYDF 187

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K Y   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 188 ACLNKQYGVVLQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 247

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+ +    K  GK    A+ +
Sbjct: 248 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINALEEEDKNSGK-APRAQYV 306

Query: 302 IATEITTMVHGREEAEKAATAAMEC-FDMSIHS------QHMPTISISKDEVSRGMGLLT 354
           +A +++ +VHG EE  +AA    EC F  S+ +      + +    +   E+ +G  L+ 
Sbjct: 307 LAEQVSRLVHG-EEGLQAAKRITECLFSGSLSALSEADFEQLAQDGVPMVEMEKGADLMQ 365

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +V +    S  +AR+ + SNAI IN    S+ +   K +D        L  GKKN+  C
Sbjct: 366 ALVDSELQPSRGQARKTIASNAITINGEKQSDPEYFFKEEDRLFGRFTLLRRGKKNY--C 423

Query: 415 HLC 417
            +C
Sbjct: 424 LIC 426


>gi|294101420|ref|YP_003553278.1| tyrosyl-tRNA synthetase [Aminobacterium colombiense DSM 12261]
 gi|293616400|gb|ADE56554.1| tyrosyl-tRNA synthetase [Aminobacterium colombiense DSM 12261]
          Length = 427

 Score =  304 bits (779), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 165/414 (39%), Positives = 245/414 (59%), Gaps = 19/414 (4%)

Query: 12  LSERGFIHQISNPRELD-ILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           L ERG +   S+P ELD     + ++TAYIG+D TA SLH GHL  +M L WLQ+ GH+P
Sbjct: 8   LQERGLVEWCSHPEELDEFFEKEEMITAYIGFDPTADSLHVGHLIPIMTLSWLQRMGHRP 67

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           I L GGGT +IGDPS + + R ++  + ++ENI  ++     F+ +  GK  AL++NN  
Sbjct: 68  ICLAGGGTGMIGDPSGKSKERNLLSPEAVRENIRGVRNQLEHFMNFNCGKNSALIVNNYD 127

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK-REQSLSFLEFNYMILQAYDFVELAK 189
           WL  I ++D LRE+G FF++N M++ E V+SRL   E+S+S+ EF+Y +LQAYDF+ L +
Sbjct: 128 WLKDISFLDFLREVGKFFTINYMVNKEHVKSRLNDPEKSISYTEFSYTLLQAYDFMHLLE 187

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
            Y C++QMGG+DQ GNI+ GIDL  + K  + +  T+PLL T+SGTK GKT  GA+WL+ 
Sbjct: 188 KYGCKIQMGGNDQQGNIVSGIDLIRKRKGDQAYGWTNPLLLTSSGTKFGKTEGGAVWLDP 247

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR-MAK-LQGKEINEAKKIIATEIT 307
           + TSPY F+Q+W N +D  V    K  T LP+ EI+  M+K L   E  EA+K +A E+T
Sbjct: 248 KRTSPYRFYQFWINTEDEMVEKLLKFFTFLPLEEIEEIMSKHLAAPEKREAQKRLAWEVT 307

Query: 308 TMVHGREEAEKAATAAMECFDMSI------------HSQHMPTISISKDEVSRGMGLLTL 355
           ++VH    A+  A A+   F   I             ++ +P  +IS    +    L+ +
Sbjct: 308 SLVHSPHAADTVARASEILFGGEITHEDMSEEMMEMLAEEVPYGTIS---TALPRSLVDV 364

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
           +V      S  EARR ++   + +N   I +E   I+        ++ +  GKK
Sbjct: 365 LVSVEACKSKGEARRLIRGGGVYVNGDRIEDENGTIEKTLLIGGRHLFVRLGKK 418


>gi|26247884|ref|NP_753924.1| tyrosyl-tRNA synthetase [Escherichia coli CFT073]
 gi|91210851|ref|YP_540837.1| tyrosyl-tRNA synthetase [Escherichia coli UTI89]
 gi|117623823|ref|YP_852736.1| tyrosyl-tRNA synthetase [Escherichia coli APEC O1]
 gi|227885946|ref|ZP_04003751.1| tyrosyl-tRNA synthetase [Escherichia coli 83972]
 gi|300995441|ref|ZP_07181093.1| tyrosyl-tRNA synthetase [Escherichia coli MS 45-1]
 gi|301051036|ref|ZP_07197879.1| tyrosyl-tRNA synthetase [Escherichia coli MS 185-1]
 gi|123266072|sp|Q1RBF8|SYY_ECOUT RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|189083651|sp|A1ABI2|SYY_ECOK1 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|26108287|gb|AAN80489.1|AE016761_64 Tyrosyl-tRNA synthetase [Escherichia coli CFT073]
 gi|91072425|gb|ABE07306.1| tyrosyl-tRNA synthetase [Escherichia coli UTI89]
 gi|115512947|gb|ABJ01022.1| tyrosine tRNA synthetase [Escherichia coli APEC O1]
 gi|227837125|gb|EEJ47591.1| tyrosyl-tRNA synthetase [Escherichia coli 83972]
 gi|300297303|gb|EFJ53688.1| tyrosyl-tRNA synthetase [Escherichia coli MS 185-1]
 gi|300406130|gb|EFJ89668.1| tyrosyl-tRNA synthetase [Escherichia coli MS 45-1]
 gi|307626876|gb|ADN71180.1| tyrosyl-tRNA synthetase [Escherichia coli UM146]
 gi|315290584|gb|EFU49958.1| tyrosyl-tRNA synthetase [Escherichia coli MS 153-1]
          Length = 428

 Score =  304 bits (779), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 167/423 (39%), Positives = 246/423 (58%), Gaps = 15/423 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 8   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 67

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +QE ++KI+   + F+ +  G+  A+ 
Sbjct: 68  AGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDCGENSAIA 127

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDF 184
            NN  W  ++  +  LR+IG  FSVN+M++ E+V+ RL RE Q +SF EF+Y +LQ YDF
Sbjct: 128 ANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNREDQGISFTEFSYNLLQGYDF 187

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K Y   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 188 ACLNKQYGVVLQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 247

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+ +    K  GK    A+ +
Sbjct: 248 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINALEEEDKNSGK-APRAQYV 306

Query: 302 IATEITTMVHGREEAEKAATAAMEC-FDMSIHS------QHMPTISISKDEVSRGMGLLT 354
           +A ++T +VHG E+  +AA    EC F  S+ +      + +    +   E+ +G  L+ 
Sbjct: 307 LAEQVTRLVHG-EDGLQAAKRITECLFSGSLSALSEADFEQLAQDGVPMVEMEKGADLMQ 365

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +V +    S  +AR+ + SNAI IN    S+ +   K +D        L  GKKN+  C
Sbjct: 366 ALVDSELQPSRGQARKTIASNAITINGEKQSDPEYFFKEEDRLFGRFTLLRRGKKNY--C 423

Query: 415 HLC 417
            +C
Sbjct: 424 LIC 426


>gi|325497175|gb|EGC95034.1| tyrosyl-tRNA synthetase [Escherichia fergusonii ECD227]
          Length = 428

 Score =  304 bits (779), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 167/423 (39%), Positives = 246/423 (58%), Gaps = 15/423 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 8   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 67

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +QE ++KI+   + F+ +  G+  A+ 
Sbjct: 68  AGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDCGENSAIA 127

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDF 184
            NN  W  ++  +  LR+IG  FSVN+M++ E+V+ RL RE Q +SF EF+Y +LQ YDF
Sbjct: 128 ANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNREDQGISFTEFSYNLLQGYDF 187

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K Y   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 188 ACLNKLYGVSLQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 247

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+ +    K  GK    A+ +
Sbjct: 248 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINALEEEDKNSGK-APRAQYV 306

Query: 302 IATEITTMVHGREEAEKAATAAMEC-FDMSIHS------QHMPTISISKDEVSRGMGLLT 354
           +A ++T +VHG EE  +AA    EC F  S+ +      + +    +   E+ +G  L+ 
Sbjct: 307 LAEQVTRLVHG-EEGLQAAKRITECLFSGSLSALSEADFEQLAQDGVPMVEMEKGADLMQ 365

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +V +    S  +AR+ + SNA+ IN    S+ +   K +D        L  GKKN+  C
Sbjct: 366 ALVDSELQPSRGQARKTIASNAVTINGEKQSDPEYFFKEEDRLFGRFTLLRRGKKNY--C 423

Query: 415 HLC 417
            +C
Sbjct: 424 LIC 426


>gi|237705581|ref|ZP_04536062.1| tyrosyl-tRNA synthetase [Escherichia sp. 3_2_53FAA]
 gi|226900338|gb|EEH86597.1| tyrosyl-tRNA synthetase [Escherichia sp. 3_2_53FAA]
 gi|315286333|gb|EFU45769.1| tyrosyl-tRNA synthetase [Escherichia coli MS 110-3]
          Length = 428

 Score =  304 bits (778), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 167/423 (39%), Positives = 246/423 (58%), Gaps = 15/423 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 8   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 67

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +QE ++KI+   + F+ +  G+  A+ 
Sbjct: 68  AGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDCGENSAIA 127

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDF 184
            NN  W  ++  +  LR+IG  FSVN+M++ E+V+ RL RE Q +SF EF+Y +LQ YDF
Sbjct: 128 ANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNREDQGISFTEFSYNLLQGYDF 187

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K Y   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 188 ACLNKQYGVVLQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 247

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+ +    K  GK    A+ +
Sbjct: 248 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINALEEEDKNSGK-APRAQYV 306

Query: 302 IATEITTMVHGREEAEKAATAAMEC-FDMSIHS------QHMPTISISKDEVSRGMGLLT 354
           +A ++T +VHG E+  +AA    EC F  S+ +      + +    +   E+ +G  L+ 
Sbjct: 307 LAEQVTRLVHG-EDGLQAAKRITECLFSGSLSALSEADFEQLAQDGVPMVEMEKGADLMQ 365

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +V +    S  +AR+ + SNAI IN    S+ +   K +D        L  GKKN+  C
Sbjct: 366 ALVDSELQPSRGQARKTIASNAITINGEKQSDPEYFFKEEDRLFGCFTLLRRGKKNY--C 423

Query: 415 HLC 417
            +C
Sbjct: 424 LIC 426


>gi|323956648|gb|EGB52385.1| tyrosyl-tRNA synthetase [Escherichia coli H263]
          Length = 424

 Score =  304 bits (778), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 167/423 (39%), Positives = 246/423 (58%), Gaps = 15/423 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 4   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +QE ++KI+   + F+ +  G+  A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDCGENSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDF 184
            NN  W  ++  +  LR+IG  FSVN+M++ E+V+ RL RE Q +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNREDQGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K Y   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 184 ACLNKQYGVVLQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+ +    K  GK    A+ +
Sbjct: 244 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINALEEEDKNSGK-APRAQYV 302

Query: 302 IATEITTMVHGREEAEKAATAAMEC-FDMSIHS------QHMPTISISKDEVSRGMGLLT 354
           +A ++T +VHG E+  +AA    EC F  S+ +      + +    +   E+ +G  L+ 
Sbjct: 303 LAEQVTRLVHG-EDGLQAAKRITECLFSGSLSALSEADFEQLAQDGVPMVEMEKGADLMQ 361

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +V +    S  +AR+ + SNAI IN    S+ +   K +D        L  GKKN+  C
Sbjct: 362 ALVDSELQPSRGQARKTIASNAITINGEKQSDPEYFFKEEDRLFGCFTLLRRGKKNY--C 419

Query: 415 HLC 417
            +C
Sbjct: 420 LIC 422


>gi|215486814|ref|YP_002329245.1| tyrosyl-tRNA synthetase [Escherichia coli O127:H6 str. E2348/69]
 gi|218558508|ref|YP_002391421.1| tyrosyl-tRNA synthetase [Escherichia coli S88]
 gi|218689584|ref|YP_002397796.1| tyrosyl-tRNA synthetase [Escherichia coli ED1a]
 gi|218695200|ref|YP_002402867.1| tyrosyl-tRNA synthetase [Escherichia coli 55989]
 gi|306813398|ref|ZP_07447588.1| tyrosyl-tRNA synthetase [Escherichia coli NC101]
 gi|312966599|ref|ZP_07780819.1| tyrosyl-tRNA synthetase [Escherichia coli 2362-75]
 gi|97201345|sp|Q8FH88|SYY_ECOL6 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|254783595|sp|B7URX8|SYY_ECO27 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|254783596|sp|B7M9Z1|SYY_ECO45 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|254783597|sp|B7L5J0|SYY_ECO55 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|254783600|sp|B7MVB5|SYY_ECO81 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|215264886|emb|CAS09272.1| tyrosyl-tRNA synthetase [Escherichia coli O127:H6 str. E2348/69]
 gi|218351932|emb|CAU97660.1| tyrosyl-tRNA synthetase [Escherichia coli 55989]
 gi|218365277|emb|CAR02998.1| tyrosyl-tRNA synthetase [Escherichia coli S88]
 gi|218427148|emb|CAR08031.2| tyrosyl-tRNA synthetase [Escherichia coli ED1a]
 gi|222033396|emb|CAP76137.1| Tyrosyl-tRNA synthetase [Escherichia coli LF82]
 gi|294493782|gb|ADE92538.1| tyrosyl-tRNA synthetase [Escherichia coli IHE3034]
 gi|305853143|gb|EFM53583.1| tyrosyl-tRNA synthetase [Escherichia coli NC101]
 gi|307553660|gb|ADN46435.1| tyrosine tRNA synthetase [Escherichia coli ABU 83972]
 gi|312288709|gb|EFR16609.1| tyrosyl-tRNA synthetase [Escherichia coli 2362-75]
 gi|312946238|gb|ADR27065.1| tyrosyl-tRNA synthetase [Escherichia coli O83:H1 str. NRG 857C]
 gi|323187062|gb|EFZ72378.1| tyrosyl-tRNA synthetase [Escherichia coli RN587/1]
 gi|323952148|gb|EGB48021.1| tyrosyl-tRNA synthetase [Escherichia coli H252]
          Length = 424

 Score =  304 bits (778), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 167/423 (39%), Positives = 246/423 (58%), Gaps = 15/423 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 4   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +QE ++KI+   + F+ +  G+  A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDCGENSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDF 184
            NN  W  ++  +  LR+IG  FSVN+M++ E+V+ RL RE Q +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNREDQGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K Y   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 184 ACLNKQYGVVLQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+ +    K  GK    A+ +
Sbjct: 244 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINALEEEDKNSGK-APRAQYV 302

Query: 302 IATEITTMVHGREEAEKAATAAMEC-FDMSIHS------QHMPTISISKDEVSRGMGLLT 354
           +A ++T +VHG E+  +AA    EC F  S+ +      + +    +   E+ +G  L+ 
Sbjct: 303 LAEQVTRLVHG-EDGLQAAKRITECLFSGSLSALSEADFEQLAQDGVPMVEMEKGADLMQ 361

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +V +    S  +AR+ + SNAI IN    S+ +   K +D        L  GKKN+  C
Sbjct: 362 ALVDSELQPSRGQARKTIASNAITINGEKQSDPEYFFKEEDRLFGRFTLLRRGKKNY--C 419

Query: 415 HLC 417
            +C
Sbjct: 420 LIC 422


>gi|218548767|ref|YP_002382558.1| tyrosyl-tRNA synthetase [Escherichia fergusonii ATCC 35469]
 gi|254783607|sp|B7LQN3|SYY_ESCF3 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|218356308|emb|CAQ88926.1| tyrosyl-tRNA synthetase [Escherichia fergusonii ATCC 35469]
 gi|324113411|gb|EGC07386.1| tyrosyl-tRNA synthetase [Escherichia fergusonii B253]
          Length = 424

 Score =  304 bits (778), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 167/423 (39%), Positives = 246/423 (58%), Gaps = 15/423 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 4   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +QE ++KI+   + F+ +  G+  A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDCGENSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDF 184
            NN  W  ++  +  LR+IG  FSVN+M++ E+V+ RL RE Q +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNREDQGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K Y   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 184 ACLNKLYGVSLQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+ +    K  GK    A+ +
Sbjct: 244 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINALEEEDKNSGK-APRAQYV 302

Query: 302 IATEITTMVHGREEAEKAATAAMEC-FDMSIHS------QHMPTISISKDEVSRGMGLLT 354
           +A ++T +VHG EE  +AA    EC F  S+ +      + +    +   E+ +G  L+ 
Sbjct: 303 LAEQVTRLVHG-EEGLQAAKRITECLFSGSLSALSEADFEQLAQDGVPMVEMEKGADLMQ 361

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +V +    S  +AR+ + SNA+ IN    S+ +   K +D        L  GKKN+  C
Sbjct: 362 ALVDSELQPSRGQARKTIASNAVTINGEKQSDPEYFFKEEDRLFGRFTLLRRGKKNY--C 419

Query: 415 HLC 417
            +C
Sbjct: 420 LIC 422


>gi|300930899|ref|ZP_07146266.1| tyrosyl-tRNA synthetase [Escherichia coli MS 187-1]
 gi|300461259|gb|EFK24752.1| tyrosyl-tRNA synthetase [Escherichia coli MS 187-1]
          Length = 428

 Score =  304 bits (778), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 167/423 (39%), Positives = 246/423 (58%), Gaps = 15/423 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 8   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 67

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +QE ++KI+   + F+ +  G+  A+ 
Sbjct: 68  AGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDCGENSAIA 127

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDF 184
            NN  W  ++  +  LR+IG  FSVN+M++ E+V+ RL RE Q +SF EF+Y +LQ YDF
Sbjct: 128 ANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNREDQGISFTEFSYNLLQGYDF 187

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K Y   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 188 ACLNKQYGVVLQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 247

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+ +    K  GK    A+ +
Sbjct: 248 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINALEEEDKNSGK-APRAQYV 306

Query: 302 IATEITTMVHGREEAEKAATAAMEC-FDMSIHS------QHMPTISISKDEVSRGMGLLT 354
           +A ++T +VHG EE  +AA    EC F  S+ +      + +    +   E+ +G  L+ 
Sbjct: 307 LAEQVTRLVHG-EEGLQAAKRITECLFSGSLSALSEADFEQLAQDGVPMVEMEKGADLMQ 365

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +V +    S  +AR+ + SNAI IN    S+ +   K ++        L  GKKN+  C
Sbjct: 366 ALVDSELQPSRGQARKTIASNAITINGEKQSDPEYFFKEEERLFGRFTLLRRGKKNY--C 423

Query: 415 HLC 417
            +C
Sbjct: 424 LIC 426


>gi|289523815|ref|ZP_06440669.1| tyrosine--tRNA ligase [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
 gi|289502959|gb|EFD24123.1| tyrosine--tRNA ligase [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
          Length = 425

 Score =  304 bits (778), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 161/425 (37%), Positives = 248/425 (58%), Gaps = 14/425 (3%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           MP    + L IL ERGF+   S+P EL  +    V + YIG+D TA SLH GHL  +M L
Sbjct: 1   MP---ENVLKILQERGFVEWCSDPDELSQVFQSRVTSGYIGFDPTADSLHVGHLVPIMGL 57

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            WLQ+ GH+PI++ GGGT +IGDPS + + R+++  ++++ N+ +IK     F+ +  G 
Sbjct: 58  AWLQRAGHQPIAVAGGGTGLIGDPSGKTKERQLLTLEQVERNLSEIKKQIEHFLDFDCGA 117

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK-REQSLSFLEFNYMIL 179
           + A ++NN +WL  +  I+ LR+ G +F+VN M++ + VRSR++  E+S+++ EF+Y++L
Sbjct: 118 SSAKIVNNYSWLSKLGLIEFLRDFGKYFTVNFMIARDYVRSRIEDPEKSITYTEFSYILL 177

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK 239
           QAYDF  L ++ +C LQMGG+DQ  NII GIDL  +    K + LT PLL TASG K GK
Sbjct: 178 QAYDFYHLYQHENCALQMGGNDQQVNIIAGIDLIRKKLGAKAYGLTYPLLLTASGQKFGK 237

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINE 297
           T  G +WL+   T+PY F+Q+W N DD DV  F K  T LP+ +I  +     +  E  E
Sbjct: 238 TEEGTVWLSPVRTTPYKFYQFWINADDRDVEKFLKLFTFLPIDDIKEVMSNHARHPERRE 297

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISIS--KDEVSRGMG---- 351
           A+KI+A EIT +VHG   A++    +   F  +   + +    +   + EV  G      
Sbjct: 298 AQKILAGEITRVVHGDNAAKRVKKVSEILFGEAYTLEDLTLELLEEIRQEVPSGNAKVIP 357

Query: 352 --LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
             L+ ++V  G   S +EARR ++S  + +N   +  E  ++   +F     + L  GKK
Sbjct: 358 SSLVDVLVHVGACASKSEARRLIRSGGVSLNGERVDEENYEVDSDNFLYGKYMLLKLGKK 417

Query: 410 NHIIC 414
            + + 
Sbjct: 418 RYYLV 422


>gi|194436502|ref|ZP_03068603.1| tyrosyl-tRNA synthetase [Escherichia coli 101-1]
 gi|253773404|ref|YP_003036235.1| tyrosyl-tRNA synthetase [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|254161699|ref|YP_003044807.1| tyrosyl-tRNA synthetase [Escherichia coli B str. REL606]
 gi|194424534|gb|EDX40520.1| tyrosyl-tRNA synthetase [Escherichia coli 101-1]
 gi|242377368|emb|CAQ32114.1| tyrosyl-tRNA synthetase [Escherichia coli BL21(DE3)]
 gi|253324448|gb|ACT29050.1| tyrosyl-tRNA synthetase [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|253973600|gb|ACT39271.1| tyrosyl-tRNA synthetase [Escherichia coli B str. REL606]
 gi|253977795|gb|ACT43465.1| tyrosyl-tRNA synthetase [Escherichia coli BL21(DE3)]
 gi|323962130|gb|EGB57725.1| tyrosyl-tRNA synthetase [Escherichia coli H489]
 gi|323973982|gb|EGB69154.1| tyrosyl-tRNA synthetase [Escherichia coli TA007]
          Length = 424

 Score =  304 bits (778), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 167/423 (39%), Positives = 246/423 (58%), Gaps = 15/423 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 4   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +QE ++KI+   + F+ +  G+  A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDCGENSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDF 184
            NN  W  ++  +  LR+IG  FSVN+M++ E+V+ RL RE Q +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNREDQGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K Y   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 184 ACLNKQYGVVLQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+ +    K  GK    A+ +
Sbjct: 244 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINALEEEDKNSGK-APRAQYV 302

Query: 302 IATEITTMVHGREEAEKAATAAMEC-FDMSIHS------QHMPTISISKDEVSRGMGLLT 354
           +A ++T +VHG EE  +AA    EC F  S+ +      + +    +   E+ +G  L+ 
Sbjct: 303 LAEQVTRLVHG-EEGLQAAKRITECLFSGSLSALSEADFEQLAQDGVPMVEMEKGADLMQ 361

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +V +    S  +AR+ + SNAI IN    S+ +   K ++        L  GKKN+  C
Sbjct: 362 ALVDSELQPSRGQARKTIASNAITINGEKQSDPEYFFKEEERLFGRFTLLRRGKKNY--C 419

Query: 415 HLC 417
            +C
Sbjct: 420 LIC 422


>gi|324006993|gb|EGB76212.1| tyrosyl-tRNA synthetase [Escherichia coli MS 57-2]
          Length = 428

 Score =  303 bits (777), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 167/423 (39%), Positives = 246/423 (58%), Gaps = 15/423 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 8   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 67

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +QE ++KI+   + F+ +  G+  A+ 
Sbjct: 68  AGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDCGENSAIA 127

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDF 184
            NN  W  ++  +  LR+IG  FSVN+M++ E+V+ RL RE Q +SF EF+Y +LQ YDF
Sbjct: 128 ANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNREDQGISFTEFSYNLLQGYDF 187

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K +   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 188 ACLNKQHGVVLQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 247

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+ +    K  GK    A+ +
Sbjct: 248 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINALEEEDKNSGK-APRAQYV 306

Query: 302 IATEITTMVHGREEAEKAATAAMEC-FDMSIHS------QHMPTISISKDEVSRGMGLLT 354
           +A ++T +VHG EE  +AA    EC F  S+ +      + +    +   E+ +G  L+ 
Sbjct: 307 LAEQVTRLVHG-EEGLQAAKRITECLFSGSLSALSEADFEQLAQDGVPMVEMEKGADLMQ 365

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +V +    S  +AR+ + SNAI IN    S+ +   K +D        L  GKKN+  C
Sbjct: 366 ALVDSELQPSRGQARKTIASNAITINGEKQSDPEYFFKEEDRLFGRFTLLRRGKKNY--C 423

Query: 415 HLC 417
            +C
Sbjct: 424 LIC 426


>gi|320197821|gb|EFW72429.1| tyrosyl-tRNA synthetase [Escherichia coli EC4100B]
          Length = 424

 Score =  303 bits (776), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 167/423 (39%), Positives = 246/423 (58%), Gaps = 15/423 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 4   SNLIKQLQERGLVAQVTDEEALVERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +QE ++KI+   + F+ +  G+  A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDCGENSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDF 184
            NN  W  ++  +  LR+IG  FSVN+M++ E+V+ RL RE Q +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNREDQGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K Y   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 184 ACLNKQYGVVLQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+ +    K  GK    A+ +
Sbjct: 244 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINALEEEDKNSGK-APRAQYV 302

Query: 302 IATEITTMVHGREEAEKAATAAMEC-FDMSIHS------QHMPTISISKDEVSRGMGLLT 354
           +A ++T +VHG EE  +AA    EC F  S+ +      + +    +   ++ +G  L+ 
Sbjct: 303 LAEQVTRLVHG-EEGLQAAKRITECLFSGSLSALSEADFEQLAQDGVPMVKMEKGADLMQ 361

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +V +    S  +AR+ + SNAI IN    S+ +   K +D        L  GKKN+  C
Sbjct: 362 ALVDSELQPSRGQARKTIASNAITINGEKQSDPEYFFKEEDRLFGRFTLLRRGKKNY--C 419

Query: 415 HLC 417
            +C
Sbjct: 420 LIC 422


>gi|325848870|ref|ZP_08170380.1| tyrosine--tRNA ligase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
 gi|325480514|gb|EGC83576.1| tyrosine--tRNA ligase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
          Length = 421

 Score =  303 bits (775), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 159/392 (40%), Positives = 244/392 (62%), Gaps = 9/392 (2%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG+    ++  EL        +T Y G+D TA SL  GHL Q+M++  +Q  GH+PI
Sbjct: 16  LKDRGYFEAATDEEELAEKLKNEKLTFYCGFDATADSLTVGHLIQIMVMMRMQNYGHRPI 75

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD----ALMLN 127
           +L+GGGT++IGDPS R + R +M  + I  N +     F  F+++     D    A+M+N
Sbjct: 76  ALLGGGTTMIGDPSGRSDMRMVMTKERIDHNADCFYKQFQRFLEFENDGEDSGDKAIMVN 135

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL ++ ++D LR++GS F VN ML  ++ ++R+  E+ L+F EF+YM+LQ+YDF+EL
Sbjct: 136 NGDWLLNLPFVDFLRDVGSNFLVNEMLKKDAYKNRM--EKGLTFFEFSYMLLQSYDFLEL 193

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            + ++C L++GGSDQW NII G DL  + +  K++ +T  LLTTA G KMGK+  GA+WL
Sbjct: 194 FRRHNCTLEIGGSDQWSNIIGGYDLIRKKEDEKVYGMTFKLLTTADGVKMGKSQKGAVWL 253

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ-GKEINEAKKIIATEI 306
           +++ TS Y  +QY RN+DD DV  F   LT LP  E  R+   +  KEIN AK+++A EI
Sbjct: 254 DEKKTSAYELFQYMRNVDDRDVEKFLLMLTFLPTDECRRLGNGKDAKEINHAKEVLAYEI 313

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
           T ++HG E+A++A  A+   F  +     MPT  I K+E+   MG+LTL+ K G   S +
Sbjct: 314 TKLIHGEEKAKEALEASKALFSGAGDESAMPTTEIEKEELP--MGILTLLTKLGLTKSNS 371

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
           +AR  +K   + IN+  I++ + +I  + F+ 
Sbjct: 372 QARDSVKGGGVSINDEKITDPRFEINEELFED 403


>gi|87310770|ref|ZP_01092897.1| tyrosyl-tRNA synthetase [Blastopirellula marina DSM 3645]
 gi|87286527|gb|EAQ78434.1| tyrosyl-tRNA synthetase [Blastopirellula marina DSM 3645]
          Length = 449

 Score =  302 bits (774), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 161/422 (38%), Positives = 241/422 (57%), Gaps = 14/422 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +D  + L  RG ++Q +    L    ++   T Y G+D TA SLH G L  LM L   QK
Sbjct: 23  NDIFADLKWRGLVYQTTADDHLQKWLNEKPRTVYAGFDPTAESLHVGSLLPLMQLRRFQK 82

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+PI+L+GG T +IGDPS +   R ++   ++++N+  IK   +  + +      A +
Sbjct: 83  AGHRPIALVGGATGMIGDPSGKSAERNLLSVDQLEQNVAGIKAQVAKLVDFDETPAGAQL 142

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQS-LSFLEFNYMILQAYDF 184
           +NN  W+    Y++ LR++G  F VN M++ +S+R+RL+RE S +S+ EF+YM+LQAYDF
Sbjct: 143 VNNFDWMNKFTYLEFLRDVGKHFPVNVMMAKDSIRNRLEREDSGISYTEFSYMLLQAYDF 202

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           V L + YDC LQ+GGSDQWGNI  G +LG R+   +LF +T PLLT A GTKMGKT SGA
Sbjct: 203 VHLNQAYDCELQIGGSDQWGNITAGTELGRRMHQKQLFGMTCPLLTKADGTKMGKTESGA 262

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKII 302
           IWL+ E TSPY F+QYW N+ D D     + LT L   EI+ + K + +E ++  ++K +
Sbjct: 263 IWLSAERTSPYAFYQYWFNVADEDAGKCLRFLTELSHEEIETLDKSRAEEPHQRASQKSL 322

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQH----------MPTISISKDEVS-RGMG 351
           A  +T ++HG E    A  A    F  +I   +          +P+  +++D ++  G+ 
Sbjct: 323 AEHLTQLIHGDEGLSTARRATEIFFGGTIEDMNDAQLGQIFADVPSSELARDRLTGDGLS 382

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           LL   V+AG A S  EARR +      +NN         +  +D  S   + L  GKK +
Sbjct: 383 LLDAFVEAGLAKSKGEARRAISQGGAYVNNVRAEGVDQALTERDLASETVMVLRSGKKKY 442

Query: 412 II 413
            +
Sbjct: 443 AL 444


>gi|194426117|ref|ZP_03058673.1| tyrosyl-tRNA synthetase [Escherichia coli B171]
 gi|194416172|gb|EDX32438.1| tyrosyl-tRNA synthetase [Escherichia coli B171]
          Length = 424

 Score =  302 bits (773), Expect = 7e-80,   Method: Compositional matrix adjust.
 Identities = 166/423 (39%), Positives = 246/423 (58%), Gaps = 15/423 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 4   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +QE ++KI+   + F+ +  G+  A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDCGENSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDF 184
            NN  W  ++  +  LR+IG  FSVN+M++ E+V+ RL RE Q +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNREDQGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K Y   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 184 ACLNKQYGVVLQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK---I 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+ + + + K   +A +   +
Sbjct: 244 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINALEE-EDKNSGKAPRVQYV 302

Query: 302 IATEITTMVHGREEAEKAATAAMEC-FDMSIHS------QHMPTISISKDEVSRGMGLLT 354
           +A  +T +VHG EE  +AA    EC F  S+ +      + +    +   E+ +G  L+ 
Sbjct: 303 LAELVTRLVHG-EEGLQAAKRITECLFSGSLSALSEADFEQLAQDGVPMVEMEKGADLMQ 361

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +V +    S  +AR+ + SNAI IN    S+ +   K +D        L  GKKN+  C
Sbjct: 362 ALVDSELQPSRGQARKTIASNAITINGEKQSDPEYFFKEEDRLFGRFTLLRRGKKNY--C 419

Query: 415 HLC 417
            +C
Sbjct: 420 LIC 422


>gi|227486177|ref|ZP_03916493.1| tyrosine--tRNA ligase [Anaerococcus lactolyticus ATCC 51172]
 gi|227235808|gb|EEI85823.1| tyrosine--tRNA ligase [Anaerococcus lactolyticus ATCC 51172]
          Length = 417

 Score =  301 bits (772), Expect = 9e-80,   Method: Compositional matrix adjust.
 Identities = 159/400 (39%), Positives = 244/400 (61%), Gaps = 6/400 (1%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG+  Q +N  EL    +   V  Y G+D TA SL  GHL Q+M++  +Q  GH+P+
Sbjct: 16  LVDRGYYEQATNEEELKKKLATESVKFYCGFDATADSLTVGHLIQIMVMMRMQNYGHRPV 75

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GGGT++IGDPS R + R++M  + I  N E     F  F+ + + +  A MLNN+ W
Sbjct: 76  ALLGGGTTLIGDPSGRSDMRQVMTVERINHNAECFYKQFQRFLDF-SDEGGAEMLNNKDW 134

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L  + ++  LR++GS F VN M+  ++ ++R+     L+F EF+YM+LQ+YDF+++ +  
Sbjct: 135 LLDLNFVGFLRDVGSEFLVNEMIKKDAYKNRMAA-GGLTFFEFSYMLLQSYDFLKMYREN 193

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
              L+MGGSDQW NII G+DL ++ +    + +T  LLTTA G KMGK+  GA+WL+KE 
Sbjct: 194 GVTLEMGGSDQWSNIIGGVDLIKKHEQGDAYGMTFALLTTADGIKMGKSQKGAVWLDKEK 253

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK-LQGKEINEAKKIIATEITTMV 310
           TSP+  +QY RN+DD DV  F  +LT LP +E  ++ +  +  EIN+AK+I+A E+  +V
Sbjct: 254 TSPFEMFQYMRNVDDRDVEKFLLQLTFLPTAECRKLGQATEAAEINKAKEILAYEVVKLV 313

Query: 311 HGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARR 370
           HG+EEA+ A  AA   F        MPT  IS  ++ +  GLL L+ + G   S  EARR
Sbjct: 314 HGKEEADAALDAAKALFSGKGDESAMPTTQISASDLPK--GLLALMTEVGLTKSNGEARR 371

Query: 371 HLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            ++   + IN+  I++   ++  + F+    I +  GKKN
Sbjct: 372 TVQQGGVSINDEKITDPAFEVTEEIFEDN-RIIIKKGKKN 410


>gi|332297576|ref|YP_004439498.1| Tyrosyl-tRNA synthetase [Treponema brennaborense DSM 12168]
 gi|332180679|gb|AEE16367.1| Tyrosyl-tRNA synthetase [Treponema brennaborense DSM 12168]
          Length = 412

 Score =  301 bits (772), Expect = 9e-80,   Method: Compositional matrix adjust.
 Identities = 165/410 (40%), Positives = 245/410 (59%), Gaps = 13/410 (3%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L  L ERGF  Q ++   L  L  +G VT Y+G D T  SLH GH+     L  L+  GH
Sbjct: 5   LETLKERGFFQQCTDIDGLSALMDKGPVTFYVGCDPTGPSLHVGHMVPFFALRHLRDAGH 64

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
             I+L+GGGT+ IGDPS + E R+M+   +I +N++KI+   + FI  G     A+  NN
Sbjct: 65  VGIALVGGGTARIGDPSGKTEMRKMLTYDQIDDNVKKIEAQLNRFI--GFDGIHAMSDNN 122

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
           + WL  + YID LR+IGS FSVNRML+FES + R+  E  LSFLEFNY +LQ++DF++L 
Sbjct: 123 KFWLADLNYIDFLRDIGSCFSVNRMLTFESYKKRM--ETGLSFLEFNYQLLQSFDFLKLH 180

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
           + ++  LQ+GG DQWGNI+ G+DL  R    ++F LT PL+T + G KMGKT  GA++L+
Sbjct: 181 ERHNACLQIGGDDQWGNIVAGVDLIRRKTGDEVFGLTFPLITRSDGKKMGKTEKGALFLD 240

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITT 308
             +T  ++F+QYWRN+ DADV  F    T L ++E+D +      +IN+AK+ +A E+T 
Sbjct: 241 PALTPIFDFFQYWRNVADADVRKFLLLFTFLSVAEVDAIVS---GDINKAKERLAWEVTA 297

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVS-RGMGLLTLIVKAGFATSTNE 367
           ++HG+ EA+ A   A   F        MPT ++     +  G+G++ L  ++  A + ++
Sbjct: 298 VIHGKAEADTALAGAKAAFGGGGDRASMPTATLPAALFAGEGIGVVDLFFESKLAATKSD 357

Query: 368 ARRHLKSNAIKINNSIISNEKLQ-----IKLQDFDSTGNIKLSFGKKNHI 412
           ARR ++     +  +  +  +LQ     I   DFD +G + L  GKK  I
Sbjct: 358 ARRLVQQGGAYMTGADGTETQLQDIAAKITAADFDGSGELILRAGKKKFI 407


>gi|256545791|ref|ZP_05473147.1| tyrosine--tRNA ligase [Anaerococcus vaginalis ATCC 51170]
 gi|256398487|gb|EEU12108.1| tyrosine--tRNA ligase [Anaerococcus vaginalis ATCC 51170]
          Length = 437

 Score =  301 bits (771), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 158/385 (41%), Positives = 242/385 (62%), Gaps = 9/385 (2%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG+    ++  EL        +T Y G+D TA SL  GHL Q+M++  +Q  GH+PI
Sbjct: 32  LKDRGYFEAATDEEELAEKLKNEKLTFYCGFDATADSLTVGHLIQIMVMMRMQNYGHRPI 91

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD----ALMLN 127
           +L+GGGT++IGDPS R + R +M  ++I  N       F  F+++     D    A++ N
Sbjct: 92  ALLGGGTTMIGDPSGRSDMRMVMTKEKINHNANCFYKQFQRFLEFENEGEDSGDKAIIEN 151

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL ++ +ID LR++GS F VN ML  ++ ++R+  ++ L+F EF+YM+LQ+YDF+EL
Sbjct: 152 NANWLLNLPFIDFLRDVGSNFLVNEMLKKDAYKNRM--DKGLTFFEFSYMLLQSYDFLEL 209

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            + ++C L++GGSDQW NII G DL  + +  K++ +T  LLTTA G KMGK+  GA+WL
Sbjct: 210 YRRHNCTLEIGGSDQWSNIIGGYDLIRKKEDAKVYGMTFKLLTTADGVKMGKSQKGAVWL 269

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ-GKEINEAKKIIATEI 306
           ++E TS Y  +QY RN+DD DV  F   LT LP +E  ++ K +  KEIN AK+++A EI
Sbjct: 270 DEEKTSAYELFQYMRNVDDRDVEKFLLMLTFLPTAECRKLGKGKDAKEINHAKEVLAYEI 329

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
           T ++HG E+A++A  A+   F  +     MPT  I K+E+   MG+LTL+ K G   S +
Sbjct: 330 TKLIHGEEKAKEALEASKALFSGAGDESAMPTTEIEKEELP--MGILTLLTKLGLTKSNS 387

Query: 367 EARRHLKSNAIKINNSIISNEKLQI 391
           +AR  +K   + IN+  I++ + +I
Sbjct: 388 QARDSVKGGGVSINDEKITDPRFEI 412


>gi|285808432|gb|ADC35958.1| putative tyrosyl-tRNA synthetase [uncultured bacterium 98]
          Length = 445

 Score =  300 bits (768), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 152/399 (38%), Positives = 233/399 (58%), Gaps = 17/399 (4%)

Query: 7   DFLSILSERGFIHQISNP-RELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           D  S    RG ++  +   RE     + G VTAY G+D TASSLH G L Q+M L  LQK
Sbjct: 2   DVFSEFEWRGVVYDATEGVREA---LATGSVTAYAGFDPTASSLHVGSLMQIMALARLQK 58

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH PI+++GGGT +IGDPS +   R +   +++  N++ I+   S F+ +      A +
Sbjct: 59  YGHSPIAVVGGGTGLIGDPSGKSAERTLQTPEQVDVNVQGIRAQLSRFLDFDAASNPARL 118

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  WL  +  ++ LR++G  F+VN +L+ ESV+ RL+ E  +S+ EF+Y++LQAYDF+
Sbjct: 119 VNNADWLTRLSAMEFLRDVGKHFTVNYILAKESVKRRLESEDGISYTEFSYLLLQAYDFL 178

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           EL   ++C LQ+GGSDQWGNI  G DL  RL+  K   L SPL+TTASGTK GKT +G I
Sbjct: 179 ELHDRFNCTLQVGGSDQWGNITAGCDLIRRLRGVKAQGLVSPLVTTASGTKFGKTEAGTI 238

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIA 303
           WL+   TSP+ F+Q+W N +D D + + K  T L  + I+ + +      E   A++ +A
Sbjct: 239 WLDAGRTSPFRFYQFWLNTEDTDAIRYLKFFTDLDAAAIEELGRGMAVAPEARAAQRTLA 298

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVS-RGMGL 352
            E+T +VHG    E+A   +   F   I +          +  P+  +  DE +  GM +
Sbjct: 299 REVTRIVHGPAHVERAERTSSVLFGEDIATLPLEDVLAVFEDAPSTEVHADEFAGEGMSM 358

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
           + L+ +   A S +EARR ++S  + +NN  +S+ + ++
Sbjct: 359 IDLLARVQLAPSKSEARRLVQSGGVYVNNRRVSDSQARL 397


>gi|212697022|ref|ZP_03305150.1| hypothetical protein ANHYDRO_01587 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212675992|gb|EEB35599.1| hypothetical protein ANHYDRO_01587 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 439

 Score =  300 bits (768), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 157/390 (40%), Positives = 242/390 (62%), Gaps = 9/390 (2%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG+    ++  EL        +T Y G+D TA SL  GHL Q+M++  +Q  GH+PI
Sbjct: 16  LKDRGYFEAATDEEELAEKLKNEKLTFYCGFDATADSLTVGHLIQIMVMMRMQNYGHRPI 75

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD----ALMLN 127
           +L+GGGT++IGDPS R + R +M  + I  N       F  F+++     D    A+M+N
Sbjct: 76  ALLGGGTTMIGDPSGRSDMRMVMTKERIDHNANCFYKQFQRFLEFENDGEDSGDKAIMVN 135

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL ++ ++D LR++GS F VN ML  ++ ++R+  E+ L+F EF+YM+LQ+YDF+EL
Sbjct: 136 NGDWLLNLPFVDFLRDVGSNFLVNEMLKKDAYKNRM--EKGLTFFEFSYMLLQSYDFLEL 193

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            + ++C L++GGSDQW NII G DL  + +  K++ +T  LLTTA G KMGK+  GA+WL
Sbjct: 194 FRRHNCTLEIGGSDQWSNIIGGYDLIRKKEDEKVYGMTFKLLTTADGVKMGKSQKGAVWL 253

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ-GKEINEAKKIIATEI 306
           +++ TS Y  +QY RN+DD DV  F   LT LP  E  R+   +  KEIN AK+++A EI
Sbjct: 254 DEKKTSAYELFQYMRNVDDRDVEKFLLMLTFLPTDECRRLGNGKDAKEINHAKEVLAYEI 313

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
           T ++HG ++A++A  A+   F  +     MPT  I K+E+   MG+LTL+ K G   S +
Sbjct: 314 TKLIHGEDKAKEALEASKALFSGAGDESAMPTTEIEKEELP--MGILTLLTKLGLTKSNS 371

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDF 396
           +AR  +K   + +N+  I++ + +I  + F
Sbjct: 372 QARDSVKGGGVSVNDEKITDPRFEINEELF 401


>gi|304413673|ref|ZP_07395117.1| tyrosyl-tRNA synthetase [Candidatus Regiella insecticola LSR1]
 gi|304283764|gb|EFL92158.1| tyrosyl-tRNA synthetase [Candidatus Regiella insecticola LSR1]
          Length = 432

 Score =  300 bits (767), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 162/396 (40%), Positives = 228/396 (57%), Gaps = 31/396 (7%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           K D +  L ERG I QI++   L    +QG ++ Y G+D TA SLH GHL  L+ L   Q
Sbjct: 3   KIDLIKELEERGLIAQITDKEALTQRLAQGSLSLYCGFDPTADSLHLGHLVPLLCLKRFQ 62

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GH PI+L+GG T +IGDPSF+ E R++   + + + + KI+   S F+ +   K  A+
Sbjct: 63  LAGHTPIALVGGATGLIGDPSFKAEERKLNTLETVDQWVAKIRQQVSPFLDFKNDKNRAI 122

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQS-LSFLEFNYMILQAYD 183
            +NN  W   +  +  LR+IG  FS+N+M+S E+V+ RL R +S LSF EF+Y +LQ YD
Sbjct: 123 TVNNYDWFAQMNVLTFLRDIGKHFSINQMISKEAVKQRLDRHESGLSFTEFSYNLLQGYD 182

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F  L K ++  LQ+GGSDQWGNI  GIDL  RL   +++ LT PL+T A GTK GKT +G
Sbjct: 183 FASLNKKHNVELQIGGSDQWGNITSGIDLTRRLHQQQVYGLTVPLITKADGTKFGKTEAG 242

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKK 300
           A+WL+ + TSPY F+Q+W N  DADV  F K  T + + +I  +    +L GK    A+ 
Sbjct: 243 AVWLDAKKTSPYKFYQFWINTSDADVYRFLKLFTFMALEDIKALQEEDQLSGKP-PRAQA 301

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQH----------------MPTISISKD 344
           ++A E+T MVHG     + A AA +    S+ S H                MPTI +  D
Sbjct: 302 VLAEEMTKMVHG-----ETALAAAQRITQSLFSSHFSDMTQADFSQLAQDGMPTIDLFSD 356

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKIN 380
                  L   +V AG A S  +AR+ +  NA+K+N
Sbjct: 357 -----TDLQQALVNAGLAPSRGQARKLISENAVKVN 387


>gi|282856522|ref|ZP_06265797.1| tyrosine--tRNA ligase [Pyramidobacter piscolens W5455]
 gi|282585643|gb|EFB90936.1| tyrosine--tRNA ligase [Pyramidobacter piscolens W5455]
          Length = 425

 Score =  300 bits (767), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 157/419 (37%), Positives = 245/419 (58%), Gaps = 17/419 (4%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L +L  RGFI   ++   +  L  +G+VTAY+G+D TA SLH GHL  LM L WLQ+ GH
Sbjct: 6   LEVLRARGFIDWTTDDGGVKELFGKGMVTAYVGFDPTADSLHVGHLIPLMGLAWLQRLGH 65

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           +PI L GGGT +IGDPS +   R ++   +I+ N+E +K   + F+ +  G+  AL++NN
Sbjct: 66  RPIVLAGGGTGMIGDPSMKSNERNLLTMDQIRHNVEGVKKQLAHFVSFDCGENSALLVNN 125

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDFVEL 187
             WL ++ +++ LR++G FF++N+M++ E VRSR++   +SLSF EF+Y +LQ+YDF  L
Sbjct: 126 YDWLSAMNFLEFLRDVGKFFTINKMIAKEHVRSRIEDPTKSLSFTEFSYTLLQSYDFYHL 185

Query: 188 AKNYDCRLQMGGSDQWGNIICGID-LGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
              Y CRLQ+GG+DQ GNI  GID + +  +   ++  T+PLL T++G K GKT  GA+W
Sbjct: 186 YTTYGCRLQLGGNDQQGNITSGIDFIRKHEEGAAVYGGTNPLLLTSAGHKFGKTEGGAVW 245

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA--KLQGKEINEAKKIIAT 304
           L+   TSPY F+Q+W N +DA +    +  T LP+ EID +    +Q  E  EA++++A 
Sbjct: 246 LDPAKTSPYQFYQFWVNSEDATIAKTLRYFTFLPLEEIDALVARHMQSPEKREAQRVLAY 305

Query: 305 EITTMVHGREEAEKAATAAMECFDMS----------IHSQHMPTISISKDEVSRGMGLLT 354
           EIT +VHG   A     A+   F  S          +H+    T   + D +   M L  
Sbjct: 306 EITKLVHGENVAANVRHASEILFGGSYTPEDLTEDMLHTLAAETPCGTVDSLP--MPLAD 363

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            + + G   S  EA+R + +  + + N + +++  Q++ QD        +  GKK + +
Sbjct: 364 ALAETGACKSKGEAKRLIAAGGVSV-NGVRADDGAQLREQDVLCGYYSLIRLGKKKYFM 421


>gi|257067000|ref|YP_003153256.1| tyrosyl-tRNA synthetase [Anaerococcus prevotii DSM 20548]
 gi|256798880|gb|ACV29535.1| tyrosyl-tRNA synthetase [Anaerococcus prevotii DSM 20548]
          Length = 416

 Score =  299 bits (766), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 160/400 (40%), Positives = 248/400 (62%), Gaps = 7/400 (1%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG+  Q +N  EL  L  +  V  Y G+D TA SL  GHL Q+M++  +Q  GH+P+
Sbjct: 16  LVDRGYYEQATNEEELKKLLKEESVKFYCGFDATADSLTVGHLIQIMVMMRMQNYGHRPV 75

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GGGT++IGDPS R + R++M  + I  N E     F  F+ +  G   A MLNN+ W
Sbjct: 76  ALLGGGTTLIGDPSGRSDMRKVMTEEMIDHNAECFYNQFQRFLDFSEGG--ATMLNNKDW 133

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L  + +++ LR++GS F VN M+  ++ ++R+     L+F EF+YM+LQ+YDF+++ +  
Sbjct: 134 LLDLNFVEFLRDVGSEFLVNEMIKKDAYKNRMA-AGGLTFFEFSYMLLQSYDFLKMYRED 192

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
             +L+MGGSDQW NII G+DL ++ +  + + +T  LLTTA G KMGK+  GA+WL+++ 
Sbjct: 193 GVKLEMGGSDQWSNIIGGVDLIKKHENGQAYGMTFSLLTTADGVKMGKSQKGAVWLDEKK 252

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ-GKEINEAKKIIATEITTMV 310
           TSPY  +QY RN+DD DV  F  +LT LP  E  ++   +   EIN+AK+I+A E+  +V
Sbjct: 253 TSPYEMYQYMRNVDDRDVEKFLLQLTFLPTEECRKLGSAKDAAEINKAKEILAYEVVKLV 312

Query: 311 HGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARR 370
           HG+E+A++A  AA   F        MPT  I+K ++ +  GLL L+ + G   S  EARR
Sbjct: 313 HGKEKADEAIAAAKALFTGKGDESAMPTTQIAKSDLPK--GLLILMTETGLTKSNGEARR 370

Query: 371 HLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            +K   + IN+  +++  +++  +D    G I +  GKKN
Sbjct: 371 IIKQGGVSINDEKVADPSIEVT-EDLFEDGRIIIKKGKKN 409


>gi|227111805|ref|ZP_03825461.1| tyrosyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           brasiliensis PBR1692]
          Length = 425

 Score =  299 bits (766), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 170/429 (39%), Positives = 238/429 (55%), Gaps = 27/429 (6%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG I Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q 
Sbjct: 4   SNLIKQLQERGLIAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQL 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
           +GHKP++L+GG T +IGDPSF+   R++  ++ + E +EKI+   S F+ +  GK  A+ 
Sbjct: 64  SGHKPVALVGGATGLIGDPSFKATERKLNTAETVGEWVEKIRRQVSPFLDFDCGKNSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYDF 184
            NN  W   +  +D LR+IG  FSVN+M+S E+V+ RL R+   +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGGMNVLDFLRDIGKHFSVNQMISKEAVKQRLNRDDVGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K +D  LQ+GGSDQWGNI  GIDL  R+   +++ LT PL+T + GTK GKT  GA
Sbjct: 184 ASLNKQHDVELQIGGSDQWGNITSGIDLTRRMNQKQVYGLTVPLITKSDGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKI 301
           IWL+   TSPY F+Q+W N  DADV  F K  T + + +ID +    K  GK    A+ +
Sbjct: 244 IWLDASKTSPYKFYQFWVNTADADVYRFLKFFTFMSLEDIDALEEEDKNSGK-APRAQYV 302

Query: 302 IATEITTMVHGREEAEKAATAAMECF-----DMS------IHSQHMPTISISKDEVSRGM 350
           +A E+T MVHG    E A       F     DM+      +    MP I     E+  G 
Sbjct: 303 LAEEVTRMVHGEAGLEAARRITQSLFSGALQDMTQDDFAQLAQDGMPII-----ELENGA 357

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD--FDSTGNIKLSFGK 408
            L   +V A    S  +AR  + SNA+ IN    ++ +      D  FD      L  GK
Sbjct: 358 DLQQALVSAELVPSRGQARTMISSNAVTINGEKQADPEYTFSDADRLFDRY--TLLRRGK 415

Query: 409 KNHIICHLC 417
           K++  C +C
Sbjct: 416 KHY--CLIC 422


>gi|227328527|ref|ZP_03832551.1| tyrosyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           carotovorum WPP14]
          Length = 425

 Score =  299 bits (766), Expect = 5e-79,   Method: Compositional matrix adjust.
 Identities = 170/429 (39%), Positives = 239/429 (55%), Gaps = 27/429 (6%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG I Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q 
Sbjct: 4   SNLIKQLQERGLIAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQL 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
           +GHKP++L+GG T +IGDPSF+   R++  ++ + E +EKI+   S F+ +  GK  A+ 
Sbjct: 64  SGHKPVALVGGATGLIGDPSFKATERKLNTAETVGEWVEKIRRQVSPFLDFDCGKNSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYDF 184
            NN  W  ++  +D LR+IG  FSVN+M+S E+V+ RL R+   +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGNMNVLDFLRDIGKHFSVNQMISKEAVKQRLNRDDVGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K +D  LQ+GGSDQWGNI  GIDL  R+   +++ LT PL+T + GTK GKT  GA
Sbjct: 184 ASLNKQHDVELQIGGSDQWGNITSGIDLTRRMNQKQVYGLTVPLITKSDGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKI 301
           IWL+   TSPY F+Q+W N  DADV  F K  T + + +ID +    K  GK    A+ +
Sbjct: 244 IWLDASKTSPYKFYQFWINTADADVYRFLKFFTFMSLEDIDALEEEDKNSGK-APRAQYV 302

Query: 302 IATEITTMVHGREEAEKAATAAMECF-----DMS------IHSQHMPTISISKDEVSRGM 350
           +A E+T MVHG    E A       F     DM+      +    MP I     E+  G 
Sbjct: 303 LAEEVTRMVHGEAGLEAARRITQSLFSGALQDMTQDDFAQLAQDGMPII-----ELENGA 357

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD--FDSTGNIKLSFGK 408
            L   +V A    S  +AR  + SNA+ IN    ++ +      D  FD      L  GK
Sbjct: 358 DLQQALVSAELVPSRGQARTMIASNAVTINGEKQADPEYTFSDSDRLFDRY--TLLRRGK 415

Query: 409 KNHIICHLC 417
           K++  C +C
Sbjct: 416 KHY--CLIC 422


>gi|207857047|ref|YP_002243698.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|254783629|sp|B5QV10|SYY_SALEP RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|206708850|emb|CAR33180.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
          Length = 424

 Score =  299 bits (765), Expect = 6e-79,   Method: Compositional matrix adjust.
 Identities = 167/423 (39%), Positives = 243/423 (57%), Gaps = 15/423 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG V  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 4   SNLIKQLQERGLVAQVTDEDALAERLAQGPVALYCGFDPTADSLHLGHLVPLLCLKRFQQ 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +QE + KI+   + F+ +  G+  A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVAKIRKQVAPFLDFDCGENSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDF 184
            NN  W  S+  +  LR+IG  FSVN+M++ E+V+ RL R+ Q +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGSMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDQGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K +   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 184 ACLNKLHGVALQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+ +    K  GK    A+ +
Sbjct: 244 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMDIEEINALEEEDKNSGK-APRAQYV 302

Query: 302 IATEITTMVHGREEAEKAATAAMEC-FDMSIHS------QHMPTISISKDEVSRGMGLLT 354
           +A ++T +VHG EE   AA    EC F  S+ +      + +    +   E+ +G  L+ 
Sbjct: 303 LAEQVTRLVHG-EEGLVAAKRITECLFSGSLSALSEADFEQLAQDGVPMVEMEKGADLMQ 361

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +V A    S  +AR+ + SNA+ IN    S+ +     +D        L  GKKN+  C
Sbjct: 362 ALVDAELQPSRGQARKTIASNAVTINGEKQSDPEYIFNDEDRLFGRYTLLRRGKKNY--C 419

Query: 415 HLC 417
            +C
Sbjct: 420 LIC 422


>gi|297181019|gb|ADI17220.1| tyrosyl-tRNA synthetase [uncultured delta proteobacterium
           HF0070_10I02]
          Length = 398

 Score =  298 bits (764), Expect = 8e-79,   Method: Compositional matrix adjust.
 Identities = 153/371 (41%), Positives = 233/371 (62%), Gaps = 10/371 (2%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           +  L+ RGFI   ++   L+   + G +T Y+G+D T  SLH GHL  +M +  LQ+ GH
Sbjct: 4   IDTLTARGFIKTHTDLDALNEAMAAGPITFYVGFDPTGDSLHIGHLLPVMAMAHLQQAGH 63

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           KPI ++GGGT+++GDPS +D++R ++  ++I+ N+E ++  F  F++    +    +++N
Sbjct: 64  KPIVVLGGGTAMVGDPSGKDKTREILTPEKIRSNLEAMRVQFGRFLELERCE----VVDN 119

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL  + YI  LR++G  FSVN+M+S E +R RL+R Q LSF+EFNY +LQ+YDF+ L 
Sbjct: 120 AEWLMGLGYIHFLRDVGKHFSVNKMMSAEGIRQRLERNQGLSFIEFNYHLLQSYDFLVLH 179

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
             Y C LQ+GG DQW NI+ G++L  R +     ALT PLL TA G KMGKT  GA WL+
Sbjct: 180 DKYGCTLQLGGDDQWFNILGGVELIRRERQQSAHALTIPLLQTADGKKMGKTEKGATWLD 239

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITT 308
               SPY+++QYW N+ DADV  F +  T +P+ EI ++  L+G +I +AK+++A E T 
Sbjct: 240 PNQCSPYDYFQYWVNVHDADVGRFLRLYTFMPLDEIAKLEALEGAQIRDAKQVLAFEATA 299

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
           + HG+EEAEKA  AA   F   + S  MP+ +     V   + +L  +V  G   S  +A
Sbjct: 300 LAHGKEEAEKARAAAQAAFSGGV-SADMPSHA-----VGFPVNILDALVATGLCKSKGDA 353

Query: 369 RRHLKSNAIKI 379
           RR ++  A+++
Sbjct: 354 RRQIQQGAVRL 364


>gi|16760464|ref|NP_456081.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. CT18]
 gi|16764797|ref|NP_460412.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|29141776|ref|NP_805118.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|56413582|ref|YP_150657.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|62180037|ref|YP_216454.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|161614133|ref|YP_001588098.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi B str. SPB7]
 gi|167551581|ref|ZP_02345335.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA29]
 gi|167994279|ref|ZP_02575371.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
 gi|168229823|ref|ZP_02654881.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Kentucky str. CDC 191]
 gi|168235521|ref|ZP_02660579.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
 gi|168463140|ref|ZP_02697071.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Newport str. SL317]
 gi|168819199|ref|ZP_02831199.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|194443795|ref|YP_002040698.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Newport str. SL254]
 gi|194448037|ref|YP_002045487.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL476]
 gi|194469349|ref|ZP_03075333.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|194735512|ref|YP_002114461.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. CVM19633]
 gi|197248693|ref|YP_002146596.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
 gi|197261628|ref|ZP_03161702.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA23]
 gi|197362506|ref|YP_002142143.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|198244916|ref|YP_002215685.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|204927912|ref|ZP_03219113.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
 gi|205352838|ref|YP_002226639.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|205358968|ref|ZP_02665896.2| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL486]
 gi|213425988|ref|ZP_03358738.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E02-1180]
 gi|213622227|ref|ZP_03375010.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-2068]
 gi|213649176|ref|ZP_03379229.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. J185]
 gi|213857492|ref|ZP_03384463.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. M223]
 gi|238913150|ref|ZP_04656987.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Tennessee str. CDC07-0191]
 gi|289824898|ref|ZP_06544319.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-3139]
 gi|75483517|sp|Q57PI8|SYY_SALCH RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|81360730|sp|Q5PIK7|SYY_SALPA RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|81416369|sp|Q7CQK7|SYY_SALTY RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|81628032|sp|Q8XG70|SYY_SALTI RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|189029770|sp|A9N034|SYY_SALPB RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|254783627|sp|B5F6J8|SYY_SALA4 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|254783628|sp|B5FIF4|SYY_SALDC RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|254783630|sp|B5RAL0|SYY_SALG2 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|254783631|sp|B4THC6|SYY_SALHS RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|254783632|sp|B4T586|SYY_SALNS RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|254783634|sp|B5BKC0|SYY_SALPK RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|254783635|sp|B4TV08|SYY_SALSV RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|25292893|pir||AE0693 tyrosyl-tRNA synthetase [imported] - Salmonella enterica subsp.
           enterica serovar Typhi (strain CT18)
 gi|16419970|gb|AAL20371.1| tyrosine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|16502760|emb|CAD01918.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi]
 gi|29137404|gb|AAO68967.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|56127839|gb|AAV77345.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|62127670|gb|AAX65373.1| tyrosine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|161363497|gb|ABX67265.1| hypothetical protein SPAB_01872 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194402458|gb|ACF62680.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Newport str. SL254]
 gi|194406341|gb|ACF66560.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL476]
 gi|194455713|gb|EDX44552.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|194711014|gb|ACF90235.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. CVM19633]
 gi|195634532|gb|EDX52884.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Newport str. SL317]
 gi|197093983|emb|CAR59479.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|197212396|gb|ACH49793.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
 gi|197239883|gb|EDY22503.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA23]
 gi|197291166|gb|EDY30519.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
 gi|197939432|gb|ACH76765.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|204323254|gb|EDZ08450.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
 gi|205272619|emb|CAR37528.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|205323596|gb|EDZ11435.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA29]
 gi|205327841|gb|EDZ14605.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
 gi|205335458|gb|EDZ22222.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Kentucky str. CDC 191]
 gi|205339245|gb|EDZ26009.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL486]
 gi|205343665|gb|EDZ30429.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|267993338|gb|ACY88223.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 14028S]
 gi|301157982|emb|CBW17477.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. SL1344]
 gi|312912432|dbj|BAJ36406.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. T000240]
 gi|320086075|emb|CBY95849.1| Tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Weltevreden str. 2007-60-3289-1]
 gi|321224067|gb|EFX49130.1| Tyrosyl-tRNA synthetase ; cluster 1 [Salmonella enterica subsp.
           enterica serovar Typhimurium str. TN061786]
 gi|322615071|gb|EFY11994.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315996572]
 gi|322619126|gb|EFY16010.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-1]
 gi|322622222|gb|EFY19067.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-3]
 gi|322627744|gb|EFY24534.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-4]
 gi|322632911|gb|EFY29655.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-1]
 gi|322636598|gb|EFY33301.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-2]
 gi|322641209|gb|EFY37851.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 531954]
 gi|322644856|gb|EFY41389.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. NC_MB110209-0054]
 gi|322650308|gb|EFY46722.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. OH_2009072675]
 gi|322655880|gb|EFY52182.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. CASC_09SCPH15965]
 gi|322660208|gb|EFY56447.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 19N]
 gi|322665227|gb|EFY61415.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 81038-01]
 gi|322669484|gb|EFY65632.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MD_MDA09249507]
 gi|322673410|gb|EFY69512.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 414877]
 gi|322677338|gb|EFY73402.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 366867]
 gi|322679999|gb|EFY76038.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 413180]
 gi|323194075|gb|EFZ79274.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609458-1]
 gi|323198557|gb|EFZ83658.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556150-1]
 gi|323202884|gb|EFZ87919.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609460]
 gi|323208603|gb|EFZ93541.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 507440-20]
 gi|323210289|gb|EFZ95185.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556152]
 gi|323215857|gb|EGA00596.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB101509-0077]
 gi|323223388|gb|EGA07721.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB102109-0047]
 gi|323225149|gb|EGA09398.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB110209-0055]
 gi|323229382|gb|EGA13505.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB111609-0052]
 gi|323236881|gb|EGA20953.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009083312]
 gi|323240357|gb|EGA24401.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009085258]
 gi|323242654|gb|EGA26675.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315731156]
 gi|323252430|gb|EGA36277.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008282]
 gi|323260362|gb|EGA43979.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008284]
 gi|323267224|gb|EGA50709.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008285]
 gi|323272743|gb|EGA56148.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008287]
 gi|326623432|gb|EGE29777.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Dublin str. 3246]
 gi|332988334|gb|AEF07317.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. UK-1]
          Length = 424

 Score =  298 bits (764), Expect = 9e-79,   Method: Compositional matrix adjust.
 Identities = 166/423 (39%), Positives = 243/423 (57%), Gaps = 15/423 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 4   SNLIKQLQERGLVAQVTDEDALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +QE + KI+   + F+ +  G+  A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVAKIRKQVAPFLDFDCGENSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDF 184
            NN  W  S+  +  LR+IG  FSVN+M++ E+V+ RL R+ Q +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGSMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDQGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K +   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 184 ACLNKLHGVALQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+ +    K  GK    A+ +
Sbjct: 244 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMDIEEINALEEEDKNSGK-APRAQYV 302

Query: 302 IATEITTMVHGREEAEKAATAAMEC-FDMSIHS------QHMPTISISKDEVSRGMGLLT 354
           +A ++T +VHG EE   AA    EC F  S+ +      + +    +   E+ +G  L+ 
Sbjct: 303 LAEQVTRLVHG-EEGLVAAKRITECLFSGSLSALSEADFEQLAQDGVPMVEMEKGADLMQ 361

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +V A    S  +AR+ + SNA+ IN    S+ +     +D        L  GKKN+  C
Sbjct: 362 ALVDAELQPSRGQARKTIASNAVTINGEKQSDPEYIFNDEDRLFGRYTLLRRGKKNY--C 419

Query: 415 HLC 417
            +C
Sbjct: 420 LIC 422


>gi|261246653|emb|CBG24463.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. D23580]
          Length = 424

 Score =  298 bits (763), Expect = 9e-79,   Method: Compositional matrix adjust.
 Identities = 166/423 (39%), Positives = 243/423 (57%), Gaps = 15/423 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 4   SNLIKQLQERGLVAQVTDEDALAERLAQGPIVLYCGFDPTADSLHLGHLVPLLCLKRFQQ 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +QE + KI+   + F+ +  G+  A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVAKIRKQVAPFLDFDCGENSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDF 184
            NN  W  S+  +  LR+IG  FSVN+M++ E+V+ RL R+ Q +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGSMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDQGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K +   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 184 ACLNKLHGVALQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+ +    K  GK    A+ +
Sbjct: 244 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMDIEEINALEEEDKNSGK-APRAQYV 302

Query: 302 IATEITTMVHGREEAEKAATAAMEC-FDMSIHS------QHMPTISISKDEVSRGMGLLT 354
           +A ++T +VHG EE   AA    EC F  S+ +      + +    +   E+ +G  L+ 
Sbjct: 303 LAEQVTRLVHG-EEGLVAAKRITECLFSGSLSALSEADFEQLAQDGVPMVEMEKGADLMQ 361

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +V A    S  +AR+ + SNA+ IN    S+ +     +D        L  GKKN+  C
Sbjct: 362 ALVDAELQPSRGQARKTIASNAVTINGEKQSDPEYIFNDEDRLFGRYTLLRRGKKNY--C 419

Query: 415 HLC 417
            +C
Sbjct: 420 LIC 422


>gi|227495383|ref|ZP_03925699.1| tyrosine--tRNA ligase [Actinomyces coleocanis DSM 15436]
 gi|226831137|gb|EEH63520.1| tyrosine--tRNA ligase [Actinomyces coleocanis DSM 15436]
          Length = 421

 Score =  298 bits (763), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 162/426 (38%), Positives = 247/426 (57%), Gaps = 21/426 (4%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           SD +  L  RG I Q ++  +L    S G VT Y GYD TA SLH GHL QL+L+  LQ 
Sbjct: 2   SDIIEELQWRGLIRQHTDLTKLREALSNGPVTFYCGYDPTAPSLHHGHLVQLILMRHLQN 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN-IEKIKGIFSSFIKYGTGKTDAL 124
            GH+P++L+GG T +IGDP    E  R ++ +E+ E  +EK++   S F+ +  G+  A+
Sbjct: 62  AGHRPLALVGGATGLIGDPRMSGE--RTLQPREVVEGWVEKLRAQISRFLSF-EGENAAV 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M+NN  W   +  IDLLR++G +F +  ML  E+V  RL  E+ +S+ EF+Y ILQA DF
Sbjct: 119 MVNNLDWTSELSAIDLLRDLGKYFRMGTMLKKEAVSRRLASEEGISYTEFSYQILQANDF 178

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           ++L + Y C L+ GG DQWGN+I G+DL  R +   +  +T+PL+T A GTK GK+  GA
Sbjct: 179 LQLYRRYGCTLETGGDDQWGNLIGGLDLIHRTEGADVHVMTTPLITKADGTKFGKSEGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKII 302
           IWL++++ SPY F+Q+W N+DDADVV F K  T L  +EI+R+ K   +E    EA+K +
Sbjct: 239 IWLSEDLLSPYAFYQFWLNVDDADVVRFLKVFTFLERAEIERLEKAVAEEPFRREAQKAL 298

Query: 303 ATEITTMVHGREEAEK--AATAAM---------ECFDMSIHSQHMPTISISKDEVSRGMG 351
           A  +T +VHG E+  +  AAT A+         +   ++  + H+P+  I+  E +    
Sbjct: 299 AASVTELVHGGEKLAQVLAATEALWGSGDLRAVDAATLASATDHLPSGEITLGEAT---- 354

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           ++  +V AG       ARR  +S    +NN  + +    +   D  + G I +  G++N 
Sbjct: 355 IVDALVAAGLEKGRGAARRTAESGGAYLNNVKVEDVDAPLTAADRLADGTILIRKGRRNL 414

Query: 412 IICHLC 417
            +  + 
Sbjct: 415 AVIRVV 420


>gi|295112152|emb|CBL28902.1| tyrosyl-tRNA synthetase [Synergistetes bacterium SGP1]
          Length = 427

 Score =  298 bits (763), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 150/417 (35%), Positives = 237/417 (56%), Gaps = 12/417 (2%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
             +L  RG+    ++   L  +    +VTAY+G+D TA SLH GHL  LM L WLQ+ GH
Sbjct: 6   FDVLKARGYFEWCTSEDRLREVMQSEMVTAYVGFDPTADSLHVGHLIPLMALGWLQRAGH 65

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           +PI+L GGGT +IGDPS + + R ++  + +Q N+E ++   + F+ +  GK  AL+LNN
Sbjct: 66  RPIALAGGGTGLIGDPSGKSKERNLITLEAVQRNVEGVRKQLAHFLDFDCGKNSALLLNN 125

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDFVEL 187
             WL  + ++D+L ++G +FSVN +++ E ++SRL+  E+ +S+ EF+Y++LQA DF  L
Sbjct: 126 YDWLSRMTFLDVLHDVGKYFSVNNLIAREYIKSRLEDPEKGISYTEFSYVLLQAIDFKHL 185

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
             +Y C+LQMGG+DQ GN++ G +   +    ++F LT PLL TASGTK GKT +GA+WL
Sbjct: 186 HDHYGCKLQMGGNDQQGNLLAGTEYIRKTSGGEVFGLTQPLLLTASGTKFGKTEAGAVWL 245

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIATE 305
           + E TSPY F+Q+W N DD DV    K  T LP+ ++  + +      E   A++ +ATE
Sbjct: 246 DAERTSPYQFYQFWVNADDRDVERLLKLYTFLPLEDVRLLMEEHAAHPERRVAQRRLATE 305

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMP---------TISISKDEVSRGMGLLTLI 356
           +T  VHG   AE  A  +   FD  +    +              S+ ++S   G+L ++
Sbjct: 306 VTQRVHGAAAAESVAKVSAVLFDPDVDLSGLSEETCLALKREAPCSEAKLSMPAGVLDVL 365

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
                  S  EA+R ++   + IN   +++E   I          + +  G+K   +
Sbjct: 366 TACSACASRGEAKRAVRQGGVSINGVRVADEGASIDADQLRYGRYLFVRVGRKKFYV 422


>gi|290509251|ref|ZP_06548622.1| tyrosyl-tRNA synthetase [Klebsiella sp. 1_1_55]
 gi|289778645|gb|EFD86642.1| tyrosyl-tRNA synthetase [Klebsiella sp. 1_1_55]
          Length = 428

 Score =  298 bits (763), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 162/422 (38%), Positives = 239/422 (56%), Gaps = 13/422 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 8   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 67

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++     +QE ++KI+   + F+ +  G   A+ 
Sbjct: 68  AGHKPVALVGGATGLIGDPSFKAAERKLNTEDTVQEWVDKIRKQVAPFLDFDCGDNSAIA 127

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDF 184
            NN  W  S+  +  LR+IG  FSVN+M++ E+V+ RL R+ Q +SF EF+Y +LQ YDF
Sbjct: 128 ANNYDWFGSMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDQGISFTEFSYNLLQGYDF 187

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K +   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 188 ACLNKLHGVALQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 247

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + M+EI+ +    K  GK    A+ +
Sbjct: 248 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMDMAEINALEEEDKNSGK-APRAQYV 306

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTL 355
           +A ++T +VHG E  E A       F+ ++        + +    +   E+ +G  LL  
Sbjct: 307 LAEQVTRLVHGEEGLEAAKRITESLFNGNLSDLSEADFEQLAQDGVPMIEMEKGADLLQA 366

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +V +    S  +AR+ + SNA+ IN    ++ +      D        L  GKKN+  C 
Sbjct: 367 LVDSELQPSRGQARKTVASNAVTINGEKQADPEYVFSDSDRLFGRYTLLRRGKKNY--CL 424

Query: 416 LC 417
           +C
Sbjct: 425 VC 426


>gi|288935193|ref|YP_003439252.1| tyrosyl-tRNA synthetase [Klebsiella variicola At-22]
 gi|288889902|gb|ADC58220.1| tyrosyl-tRNA synthetase [Klebsiella variicola At-22]
          Length = 424

 Score =  298 bits (763), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 162/422 (38%), Positives = 239/422 (56%), Gaps = 13/422 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 4   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++     +QE ++KI+   + F+ +  G   A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTEDTVQEWVDKIRKQVAPFLDFDCGDNSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDF 184
            NN  W  S+  +  LR+IG  FSVN+M++ E+V+ RL R+ Q +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGSMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDQGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K +   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 184 ACLNKLHGVALQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + M+EI+ +    K  GK    A+ +
Sbjct: 244 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMDMAEINALEEEDKNSGK-APRAQYV 302

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTL 355
           +A ++T +VHG E  E A       F+ ++        + +    +   E+ +G  LL  
Sbjct: 303 LAEQVTRLVHGEEGLEAAKRITESLFNGNLSDLSEADFEQLAQDGVPMIEMEKGADLLQA 362

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +V +    S  +AR+ + SNA+ IN    ++ +      D        L  GKKN+  C 
Sbjct: 363 LVDSELQPSRGQARKTVASNAVTINGEKQADPEYVFSDSDRLFGRYTLLRRGKKNY--CL 420

Query: 416 LC 417
           +C
Sbjct: 421 VC 422


>gi|213051637|ref|ZP_03344515.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E00-7866]
 gi|213586445|ref|ZP_03368271.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-0664]
 gi|224584042|ref|YP_002637840.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|254783633|sp|C0Q5T3|SYY_SALPC RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|224468569|gb|ACN46399.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|322687471|gb|EFY83443.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 446600]
 gi|322714506|gb|EFZ06077.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. A50]
 gi|323129719|gb|ADX17149.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 4/74]
 gi|326627909|gb|EGE34252.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 9]
          Length = 428

 Score =  298 bits (763), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 166/423 (39%), Positives = 243/423 (57%), Gaps = 15/423 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 8   SNLIKQLQERGLVAQVTDEDALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 67

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +QE + KI+   + F+ +  G+  A+ 
Sbjct: 68  AGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVAKIRKQVAPFLDFDCGENSAIA 127

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDF 184
            NN  W  S+  +  LR+IG  FSVN+M++ E+V+ RL R+ Q +SF EF+Y +LQ YDF
Sbjct: 128 ANNYDWFGSMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDQGISFTEFSYNLLQGYDF 187

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K +   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 188 ACLNKLHGVALQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 247

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+ +    K  GK    A+ +
Sbjct: 248 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMDIEEINALEEEDKNSGK-APRAQYV 306

Query: 302 IATEITTMVHGREEAEKAATAAMEC-FDMSIHS------QHMPTISISKDEVSRGMGLLT 354
           +A ++T +VHG EE   AA    EC F  S+ +      + +    +   E+ +G  L+ 
Sbjct: 307 LAEQVTRLVHG-EEGLVAAKRITECLFSGSLSALSEADFEQLAQDGVPMVEMEKGADLMQ 365

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +V A    S  +AR+ + SNA+ IN    S+ +     +D        L  GKKN+  C
Sbjct: 366 ALVDAELQPSRGQARKTIASNAVTINGEKQSDPEYIFNDEDRLFGRYTLLRRGKKNY--C 423

Query: 415 HLC 417
            +C
Sbjct: 424 LIC 426


>gi|50120866|ref|YP_050033.1| tyrosyl-tRNA synthetase [Pectobacterium atrosepticum SCRI1043]
 gi|81645269|sp|Q6D5V2|SYY_ERWCT RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|49611392|emb|CAG74839.1| tyrosyl-tRNA synthetase [Pectobacterium atrosepticum SCRI1043]
          Length = 425

 Score =  297 bits (761), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 170/429 (39%), Positives = 237/429 (55%), Gaps = 27/429 (6%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG I Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q 
Sbjct: 4   SNLIKQLQERGLIAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQL 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
           +GHKP++L+GG T +IGDPSF+   R++  S+ + E +EKI+   S F+ +  GK  A+ 
Sbjct: 64  SGHKPVALVGGATGLIGDPSFKATERKLNTSETVGEWVEKIRRQVSPFLDFDCGKNSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYDF 184
            NN  W  ++  +D LR+IG  FSVN+M+S E+V+ RL R+   +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGNMNVLDFLRDIGKHFSVNQMISKEAVKQRLNRDDVGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K +D  LQ+GGSDQWGNI  GIDL  R+   +++ LT PL+T + GTK GKT  GA
Sbjct: 184 ASLNKQHDVELQIGGSDQWGNITSGIDLTRRMNQKQVYGLTVPLITKSDGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKI 301
           IWL+   TSPY F+Q+W N  DADV  F K  T + +  ID +    K  GK    A+ +
Sbjct: 244 IWLDASKTSPYKFYQFWINTADADVYRFLKFFTFMSLENIDALEEEDKNSGK-APRAQYV 302

Query: 302 IATEITTMVHGREEAEKAATAAMECF-----DMS------IHSQHMPTISISKDEVSRGM 350
           +A ++T MVHG    E A       F     DM+      +    MP I     E+    
Sbjct: 303 LAEDVTRMVHGEAGLEAARRITQSLFSGALQDMTQDDFAQLAQDGMPII-----ELENSA 357

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD--FDSTGNIKLSFGK 408
            L   +V A    S  +AR  + SNA+ IN    +N +      D  FD      L  GK
Sbjct: 358 DLQQALVSAELVPSRGQARTMISSNAVTINGEKQANPEYIFSASDRLFDRY--TLLRRGK 415

Query: 409 KNHIICHLC 417
           K++  C +C
Sbjct: 416 KHY--CLIC 422


>gi|200389646|ref|ZP_03216257.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|199602091|gb|EDZ00637.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
          Length = 424

 Score =  297 bits (760), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 165/423 (39%), Positives = 242/423 (57%), Gaps = 15/423 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 4   SNLIKQLQERGLVAQVTDEDALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +QE + KI+   + F+ +  G+  A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVAKIRKQVAPFLDFDCGENSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDF 184
            NN  W  S+  +  LR+IG  FSVN+M++ E+V+ RL R+ Q +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGSMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDQGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K +   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 184 ACLNKLHGVALQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+ +    K  GK    A+ +
Sbjct: 244 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMDIEEINALEEEDKNSGK-APRAQYV 302

Query: 302 IATEITTMVHGREEAEKAATAAMEC-FDMSIHS------QHMPTISISKDEVSRGMGLLT 354
           +A ++T +VHG EE   AA    EC F  S+ +      + +    +   E+ +G  L+ 
Sbjct: 303 LAEQVTRLVHG-EEGLVAAKRITECLFSGSLSALSEADFEQLAQDGVPMVEMEKGADLMQ 361

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +V A    S  +AR+ + SNA+ IN     + +     +D        L  GKKN+  C
Sbjct: 362 ALVDAELQPSRGQARKTIASNAVTINGEKQPDPEYIFNDEDRLFGRYTLLRRGKKNY--C 419

Query: 415 HLC 417
            +C
Sbjct: 420 LIC 422


>gi|253688754|ref|YP_003017944.1| tyrosyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|259517008|sp|C6DK25|SYY_PECCP RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|251755332|gb|ACT13408.1| tyrosyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           carotovorum PC1]
          Length = 425

 Score =  296 bits (759), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 169/429 (39%), Positives = 236/429 (55%), Gaps = 27/429 (6%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG I Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q 
Sbjct: 4   SNLIKQLQERGLIAQVTDEGALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQL 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++  +  + E +EKI+   S F+ +  GK  A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKATERKLNTADTVGEWVEKIRRQVSPFLDFDCGKNSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYDF 184
            NN  W   +  +D LR+IG  FSVN+M++ E+V+ RL R+   +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGGMNVLDFLRDIGKHFSVNQMINKEAVKQRLNRDDVGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K +D  LQ+GGSDQWGNI  GIDL  R+   +++ LT PL+T + GTK GKT  GA
Sbjct: 184 ASLNKQHDVELQIGGSDQWGNITSGIDLTRRMNQKQVYGLTVPLITKSDGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKI 301
           IWL+   TSPY F+Q+W N  DADV  F K  T + + +ID +    K  GK    A+ +
Sbjct: 244 IWLDASKTSPYKFYQFWINTADADVYRFLKFFTFMSLEDIDALEEEDKNSGK-APRAQYV 302

Query: 302 IATEITTMVHGREEAEKAATAAMECF-----DMS------IHSQHMPTISISKDEVSRGM 350
           +A E+T MVHG    E A       F     DM+      +    MP I     E+  G 
Sbjct: 303 LAEEVTRMVHGEAGLEAARRITQSLFSGALQDMTQDDFAQLAQDGMPII-----ELENGA 357

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD--FDSTGNIKLSFGK 408
            L   +V A    S  +AR  + SNA+ IN    ++ +      D  FD      L  GK
Sbjct: 358 DLQQALVSAELVPSRGQARTMISSNAVTINGEKQADPEYTFSASDRLFDRY--TLLRRGK 415

Query: 409 KNHIICHLC 417
           K++  C +C
Sbjct: 416 KHY--CLIC 422


>gi|261821918|ref|YP_003260024.1| tyrosyl-tRNA synthetase [Pectobacterium wasabiae WPP163]
 gi|261605931|gb|ACX88417.1| tyrosyl-tRNA synthetase [Pectobacterium wasabiae WPP163]
          Length = 425

 Score =  296 bits (759), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 167/428 (39%), Positives = 234/428 (54%), Gaps = 25/428 (5%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG I Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q 
Sbjct: 4   SNLIKQLQERGLIAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQL 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+P++L+GG T +IGDPSF+   R++  +  + E +EKI+   S F+ +  GK  A+ 
Sbjct: 64  AGHQPVALVGGATGLIGDPSFKATERKLNTADTVGEWVEKIRRQVSPFLDFDCGKNSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYDF 184
            NN  W  S+  +D LR+IG  FSVN+M+S E+V+ RL R+   +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGSMNVLDFLRDIGKHFSVNQMISKEAVKQRLNRDDVGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K +D  LQ+GGSDQWGNI  GIDL  R+   +++ LT PL+T + GTK GKT  GA
Sbjct: 184 ASLNKQHDVELQIGGSDQWGNITSGIDLTRRMNQKQVYGLTVPLITKSDGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE--INEAKKII 302
           IWL+   TSPY F+Q+W N  DADV  F K  T + + +ID + +          A+ ++
Sbjct: 244 IWLDASKTSPYKFYQFWINTADADVYRFLKFFTFMSLEDIDALEEEDKNSGTAPRAQYVL 303

Query: 303 ATEITTMVHGREEAEKAATAAMECF-----DMS------IHSQHMPTISISKDEVSRGMG 351
           A E+T MVHG    E A       F     DM+      +    MP I     E+     
Sbjct: 304 AEEVTRMVHGESGLEAARRITQSLFSGALQDMTQDDFAQLAQDGMPII-----ELENSAD 358

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD--FDSTGNIKLSFGKK 409
           L   +V A    S  +AR  + SNA+ IN    +N +      D  FD      L  GKK
Sbjct: 359 LQQALVSAELVPSRGQARTMIASNAVTINGEKQANPEYTFSAADRLFDRY--TLLRRGKK 416

Query: 410 NHIICHLC 417
           ++  C +C
Sbjct: 417 HY--CLIC 422


>gi|283785148|ref|YP_003365013.1| tyrosyl-tRNA synthetase [Citrobacter rodentium ICC168]
 gi|282948602|emb|CBG88193.1| tyrosyl-tRNA synthetase [Citrobacter rodentium ICC168]
          Length = 424

 Score =  296 bits (759), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 164/423 (38%), Positives = 244/423 (57%), Gaps = 15/423 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG I Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 4   SNLIKQLQERGLIAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +QE ++KI+   + F+ +  G+  A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDCGENSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDF 184
            NN  W  S+  +  LR+IG  FSVN+M++ E+V+ RL R +Q +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGSMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDQGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K +   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 184 ACLNKLHGVALQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + ++EI+ +    K  GK    A+ +
Sbjct: 244 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMDIAEINALEEEDKNSGK-APRAQYV 302

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTL 355
           +A ++T +VHG E    A       F+ ++ +      + +    +   E+ +G  L+  
Sbjct: 303 LAEQVTRLVHGEEGLAAAKRITESLFNGTLSALSEADFEQLAQDGVPMVEMEKGADLMQA 362

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK-LSFGKKNHIIC 414
           +V +    S  +AR+ + SNAI IN    S+ +  I + D    G    L  GKKN+  C
Sbjct: 363 LVDSELQPSRGQARKTIASNAITINGEKQSDPEY-IFVDDDRLYGRYTLLRRGKKNY--C 419

Query: 415 HLC 417
            +C
Sbjct: 420 LVC 422


>gi|255083086|ref|XP_002504529.1| predicted protein [Micromonas sp. RCC299]
 gi|226519797|gb|ACO65787.1| predicted protein [Micromonas sp. RCC299]
          Length = 506

 Score =  296 bits (759), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 157/431 (36%), Positives = 242/431 (56%), Gaps = 20/431 (4%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           K+D + +L ERG +   +N  EL   C++G ++ Y G+D TA SLH G+L  +++L W Q
Sbjct: 76  KADVVDVLKERGLLDACTNEDELRKACAEGSLSVYCGFDPTADSLHLGNLLGIVVLAWFQ 135

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD-- 122
           + GH P++L+GG T  +GDPS +   R ++    I  N   IK I    +  G    D  
Sbjct: 136 RCGHTPVALLGGATGRVGDPSGKSAERPVLDDDTINANTAGIKAILERVLANGAADADTD 195

Query: 123 ---ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
              A+++NN  W  S+ +++ LRE+G +  V  M++ +SV++RL  EQ +SF EF+Y +L
Sbjct: 196 VPPAVVMNNLDWFGSMGFLEFLREVGKYARVGTMMAKDSVKTRLDSEQGMSFTEFSYQLL 255

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK-LFALTSPLLTTASGTKMG 238
           Q YDF  L K +D R+Q+GGSDQWGNI  G DL  RL   +  + +T PLL  A G K G
Sbjct: 256 QGYDFCHLFKEHDVRVQVGGSDQWGNITAGTDLIRRLADKEGAWGVTFPLLLKADGRKFG 315

Query: 239 KTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEI 295
           K+  GA+WL+ E  SPY F+QY     DADVV F + LT +P++EI+ +       G   
Sbjct: 316 KSEDGAVWLSPERLSPYKFYQYMLQSTDADVVRFMRMLTFVPLAEIEAIEASMSADGYVP 375

Query: 296 NEAKKIIATEITTMVHGRE---EAEKA-------ATAAMECFDMSIHSQHMPTISISKDE 345
           N A+K +A E+T  VHG+E   +A KA       A   ++   +   +  +PT  +++DE
Sbjct: 376 NTAQKRLAEEVTRFVHGKEGLTQALKATEGLKPGADTVLDAATLEALAGDIPTAELARDE 435

Query: 346 VSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLS 405
           V  G  ++ ++   G   S  EA+R +K    ++NN  + +E+  I   D      + L+
Sbjct: 436 VV-GKTVVDVMAATGLQKSKGEAKRMIKGGGARLNNVKVEDEEATIGEDDVIEGRVLLLA 494

Query: 406 FGKKNHIICHL 416
            GKKN ++  +
Sbjct: 495 AGKKNKLLVRV 505


>gi|152970527|ref|YP_001335636.1| tyrosyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
           MGH 78578]
 gi|262044618|ref|ZP_06017673.1| tyrosine-tRNA ligase [Klebsiella pneumoniae subsp. rhinoscleromatis
           ATCC 13884]
 gi|330015707|ref|ZP_08308230.1| tyrosine--tRNA ligase [Klebsiella sp. MS 92-3]
 gi|189083656|sp|A6T9Y5|SYY_KLEP7 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|150955376|gb|ABR77406.1| tyrosyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
           MGH 78578]
 gi|259038019|gb|EEW39235.1| tyrosine-tRNA ligase [Klebsiella pneumoniae subsp. rhinoscleromatis
           ATCC 13884]
 gi|328531176|gb|EGF58025.1| tyrosine--tRNA ligase [Klebsiella sp. MS 92-3]
          Length = 428

 Score =  296 bits (758), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 161/422 (38%), Positives = 239/422 (56%), Gaps = 13/422 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 8   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 67

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++     +QE ++KI+   + F+ +  G   A+ 
Sbjct: 68  AGHKPVALVGGATGLIGDPSFKAAERKLNTEDTVQEWVDKIRKQVAPFLDFDCGDNSAIA 127

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDF 184
            NN  W  S+  +  LR+IG  FSVN+M++ E+V+ RL R+ Q +SF EF+Y +LQ YDF
Sbjct: 128 ANNYDWFGSMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDQGISFTEFSYNLLQGYDF 187

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K +   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 188 ACLNKLHGVALQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 247

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + ++EI+ +    K  GK    A+ +
Sbjct: 248 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMDIAEINALEEEDKNSGK-APRAQYV 306

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTL 355
           +A ++T +VHG E  E A       F+ ++        + +    +   E+ +G  LL  
Sbjct: 307 LAEQVTRLVHGEEGLEAAKRITESLFNGNLSDLSEADFEQLAQDGVPMIEMEKGADLLQA 366

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +V +    S  +AR+ + SNA+ IN    ++ +      D        L  GKKN+  C 
Sbjct: 367 LVDSELQPSRGQARKTVASNAVTINGEKQADPEYVFSDSDRLFGRYTLLRRGKKNY--CL 424

Query: 416 LC 417
           +C
Sbjct: 425 VC 426


>gi|94962153|gb|ABF48398.1| O-propargyltyrosyl tRNA synthetase [synthetic construct]
          Length = 424

 Score =  296 bits (758), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 165/423 (39%), Positives = 243/423 (57%), Gaps = 15/423 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +    G+D TA SLH GHL  L+ L   Q+
Sbjct: 4   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALGCGFDPTADSLHLGHLVPLLCLKRFQQ 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +QE ++KI+   + F+ +  G+  A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDCGENSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDF 184
            NN  W  ++  +  LR+IG  FSVN+M++ E+V+ RL RE Q +SF EF+Y +LQ Y  
Sbjct: 124 ANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNREDQGISFTEFSYNLLQGYSM 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K Y   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 184 ACLNKQYGVVLQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+ +    K  GK    A+ +
Sbjct: 244 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINALEEEDKNSGK-APRAQYV 302

Query: 302 IATEITTMVHGREEAEKAATAAMEC-FDMSIHS------QHMPTISISKDEVSRGMGLLT 354
           +A ++T +VHG EE  +AA    EC F  S+ +      + +    +   E+ +G  L+ 
Sbjct: 303 LAEQVTRLVHG-EEGLQAAKRITECLFSGSLSALSEADFEQLAQDGVPMVEMEKGADLMQ 361

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +V +    S  +AR+ + SNAI IN    S+ +   K +D        L  GKKN+  C
Sbjct: 362 ALVDSELQPSRGQARKTIASNAITINGEKQSDPEYFFKEEDRLFGRFTLLRRGKKNY--C 419

Query: 415 HLC 417
            +C
Sbjct: 420 LIC 422


>gi|284007966|emb|CBA73966.1| tyrosyl-tRNA synthetase [Arsenophonus nasoniae]
          Length = 429

 Score =  296 bits (758), Expect = 5e-78,   Method: Compositional matrix adjust.
 Identities = 160/386 (41%), Positives = 233/386 (60%), Gaps = 25/386 (6%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L ERG I Q+++ + L    SQG VT Y G+D TA SLH GHL  L+ L   Q+ GH+P+
Sbjct: 15  LQERGLIAQLTDEKALIEKLSQGSVTLYCGFDPTADSLHLGHLVPLLCLKRFQQMGHQPV 74

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+   R++  S+ +Q+ +EKI+   S F+ +  G   A ++NN  W
Sbjct: 75  ALVGGATGLIGDPSFKATERKLNTSETVQQWVEKIRQQVSPFLDFDCGNNSAKVVNNYDW 134

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQS-LSFLEFNYMILQAYDFVELAKN 190
              +  +  LR+IG  FSVN+M++ E+V+ RL+R+ + +SF EF+Y +LQ+YDF  L   
Sbjct: 135 FGQMDVLTFLRDIGKHFSVNQMINKEAVKQRLERDDAGISFTEFSYNLLQSYDFANLCYQ 194

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKE 250
           ++  LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT +GA+WL+ +
Sbjct: 195 HNVELQIGGSDQWGNITSGIDLTRRLFQKQVFGLTVPLITKSDGTKFGKTEAGAVWLDPQ 254

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN-----EAKKIIATE 305
            TSPY F+Q+W N  DADV  F K  T +P+ EID    LQ ++ N      A+ ++A +
Sbjct: 255 KTSPYKFYQFWVNTADADVYRFLKFFTFMPIEEID---ALQEEDQNSGKAPRAQYVLAEK 311

Query: 306 ITTMVHGRE--EAEKAAT--------AAMECFDMSIHSQH-MPTISISKDEVSRGMGLLT 354
           +T +VHG E  +A K  T        AA+   D +  +Q  MP I ++      G  L  
Sbjct: 312 VTQLVHGDEGLQAAKRITESLFSDTIAALTAADFAQLAQDGMPMIKLNS-----GADLQQ 366

Query: 355 LIVKAGFATSTNEARRHLKSNAIKIN 380
            +V+A    S  +AR  + S A+ IN
Sbjct: 367 ALVEAKLVPSRGQARTMISSKAVAIN 392


>gi|161503459|ref|YP_001570571.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. arizonae
           serovar 62:z4,z23:-- str. RSK2980]
 gi|189029769|sp|A9MEH2|SYY_SALAR RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|160864806|gb|ABX21429.1| hypothetical protein SARI_01533 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 428

 Score =  295 bits (755), Expect = 8e-78,   Method: Compositional matrix adjust.
 Identities = 162/422 (38%), Positives = 239/422 (56%), Gaps = 13/422 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 8   SNLIKQLQERGLVAQVTDEDALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 67

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +QE + KI+   + F+ +  G+  A+ 
Sbjct: 68  AGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVAKIRKQVAPFLDFDCGENSAIA 127

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDF 184
            NN  W  S+  +  LR+IG  FSVN+M++ E+V+ RL R+ Q +SF EF+Y +LQ YDF
Sbjct: 128 ANNYDWFGSMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDQGISFTEFSYNLLQGYDF 187

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K +   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 188 ACLNKLHGVALQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 247

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+ +    K  GK    A+ +
Sbjct: 248 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMDIEEINALEEEDKNSGK-APRAQYV 306

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTL 355
           +A ++T +VHG E    A       F+ S+        + +    +   E+ +G  L+  
Sbjct: 307 LAEQVTRLVHGEEGLIAAKRITESLFNGSLGELSEADFEQLAQDGVPMIELEKGTDLMQA 366

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +V A    S  +AR+ + SNA+ IN    S+ +     +D        L  GKKN+  C 
Sbjct: 367 LVDAELQPSRGQARKTIASNAVTINGEKQSDPEYIFNDEDRLFGRYTLLRRGKKNY--CL 424

Query: 416 LC 417
           +C
Sbjct: 425 IC 426


>gi|238895018|ref|YP_002919752.1| tyrosyl-tRNA synthetase [Klebsiella pneumoniae NTUH-K2044]
 gi|238547334|dbj|BAH63685.1| tyrosyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
           NTUH-K2044]
          Length = 424

 Score =  295 bits (755), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 161/422 (38%), Positives = 238/422 (56%), Gaps = 13/422 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 4   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++     +QE ++KI+   + F+ +  G   A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTEDTVQEWVDKIRKQVAPFLDFDCGDNSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDF 184
            NN  W  S+  +  LR+IG  FSVN+M++ E+V+ RL R +Q +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGSMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDQGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K +   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 184 ACLNKLHGVALQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+ +    K  GK    A+ +
Sbjct: 244 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMDIVEINALEEEDKNSGK-APRAQYV 302

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTL 355
           +A ++T +VHG E  E A       F+ ++        + +    +   E+ +G  LL  
Sbjct: 303 LAEQVTRLVHGEEGLEAAKRITESLFNGNLSDLSEADFEQLAQDGVPMIEMEKGADLLQA 362

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +V +    S  +AR+ + SNA+ IN    ++ +      D        L  GKKN+  C 
Sbjct: 363 LVDSELQPSRGQARKTVASNAVTINGEKQADPEYVFADSDRLFGRYTLLRRGKKNY--CL 420

Query: 416 LC 417
           +C
Sbjct: 421 VC 422


>gi|297621555|ref|YP_003709692.1| Tyrosyl-tRNA synthetase [Waddlia chondrophila WSU 86-1044]
 gi|297376856|gb|ADI38686.1| Tyrosyl-tRNA synthetase [Waddlia chondrophila WSU 86-1044]
          Length = 427

 Score =  295 bits (755), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 158/424 (37%), Positives = 241/424 (56%), Gaps = 16/424 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ L  L ERGFI  +++ +  D L  Q  V  Y G+D T+ SLH G++  +M L W QK
Sbjct: 2   SNLLETLRERGFIESVTHDQLGDFLEKQ--VHVYCGFDPTSDSLHLGNMVAIMGLAWFQK 59

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH P  ++GG T +IGDPS + + R+++  +++  N+E I+  F   + +   K   ++
Sbjct: 60  FGHTPYVILGGATGMIGDPSGKSKERQLLDEKQLSRNVEGIRKNFHGILDFTLAKASPVV 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           LNN  W     ++  LRE+G +F V+ MLS ESVR+RL+ E+ LSF EF+Y +LQ YDF+
Sbjct: 120 LNNYDWFRQFSFVQFLREVGKYFRVSTMLSKESVRTRLESEEGLSFTEFSYQLLQGYDFL 179

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L +N++  +Q+GGSDQWGNI  GIDL  R+   +++ LT PLLTT+ G K GK+  GAI
Sbjct: 180 YLNENHNVSVQIGGSDQWGNITAGIDLVRRVAGKEVYGLTMPLLTTSDGKKFGKSEEGAI 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE---INEAKKII 302
           WL+ +  SPY F+QY   + D DV+   K LT + M EI +   +  +E    N A+K +
Sbjct: 240 WLSPDKLSPYQFYQYLVRVQDNDVIRLMKMLTFMEMDEIRKYESMMEREDYVPNTAQKRL 299

Query: 303 ATEITTMVHGRE---EAEKAATAAMECFDMSIHSQ-------HMPTISISKDEVSRGMGL 352
           A E+T MVHG +    A K   AA    +  ++++        MP+ +   +E+     L
Sbjct: 300 AAEVTQMVHGDQGLKTALKVTEAAKPGRETDLNAEVLESIAHDMPSETFKAEEIVNNK-L 358

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           + ++V  G   S  +ARR +++    +NN  ++ E       DF     I L+ GKKN  
Sbjct: 359 IDVVVLTGLQESKGQARRLIRNGGCYLNNKKMTEENHVFTADDFVDGRLILLAVGKKNKK 418

Query: 413 ICHL 416
           +  L
Sbjct: 419 LIRL 422


>gi|331007993|ref|ZP_08331036.1| Tyrosyl-tRNA synthetase [gamma proteobacterium IMCC1989]
 gi|330418199|gb|EGG92822.1| Tyrosyl-tRNA synthetase [gamma proteobacterium IMCC1989]
          Length = 433

 Score =  295 bits (754), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 154/396 (38%), Positives = 235/396 (59%), Gaps = 15/396 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +D ++ L  RG + QI+     +   ++   T Y G+D TA SLH G L  L+ L   Q 
Sbjct: 5   ADLIADLRARGLVAQITREEVFESYLTEEARTLYCGFDPTADSLHIGSLVPLLTLRRFQL 64

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+ + R++     I+E +EK+K   S FI +  G+  A +
Sbjct: 65  AGHKPLALVGGATGLIGDPSFKAQERKLNTPDVIEEWVEKLKRQISGFIDFECGEASAEV 124

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDF 184
           +NN  W   +  +D LR++G  FS+N M++ ESV+ RL R+ + +SF EF YM+LQ+YDF
Sbjct: 125 VNNLDWTKDLNILDFLRDVGKHFSINNMVNKESVKQRLDRDGEGISFTEFTYMLLQSYDF 184

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
            EL + Y C LQ+GGSDQWGNI  G+DL  R    ++F LT PL+T + GTK GKT SG 
Sbjct: 185 SELYQRYGCTLQIGGSDQWGNITGGVDLARRQHGGQVFGLTMPLVTKSDGTKFGKTESGT 244

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKKII 302
           IWL+ + TSPY F+Q+W N  DADV +F +  T L ++EI+ +  A  Q     +A+KI+
Sbjct: 245 IWLDPQKTSPYAFYQFWVNTADADVYTFLRYFTFLDVAEIEAIEEADRQASGRPQAQKIL 304

Query: 303 ATEITTMVHGREE-------AEKAATAAMECFDMS----IHSQHMPTISISKDEVSRGMG 351
           A E+T +VHG +         E   +  ++  ++S    +    +PT S+   ++S+ + 
Sbjct: 305 AEEVTRLVHGEDSLLAAQRITEALFSGGVDQLNLSDMQQLQQDGLPTTSLEGLDLSKEI- 363

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNE 387
           L  L+V +G A +  + +  L  NAI +N   + +E
Sbjct: 364 LTNLLVSSGVAKNGKQVKDALSRNAIVVNGVPVPSE 399


>gi|238787158|ref|ZP_04630958.1| Tyrosyl-tRNA synthetase [Yersinia frederiksenii ATCC 33641]
 gi|238724946|gb|EEQ16586.1| Tyrosyl-tRNA synthetase [Yersinia frederiksenii ATCC 33641]
          Length = 428

 Score =  295 bits (754), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 160/390 (41%), Positives = 222/390 (56%), Gaps = 21/390 (5%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG ++ Y G+D TA SLH GHL  L+ L   Q 
Sbjct: 8   SNLIKQLQERGLVAQVTDEDALAERLAQGPISLYCGFDPTADSLHLGHLVPLLCLKRFQL 67

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+P++L+GG T +IGDPSF+   R++     + E +EKI+   S F+ +  G+  A+ 
Sbjct: 68  AGHRPVALVGGATGMIGDPSFKANERKLNTEDTVNEWVEKIRRQVSPFLDFDCGENSAIA 127

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQS-LSFLEFNYMILQAYDF 184
            NN  W   +  +  LR+IG  FSVN+M++ E+V+ RL R+ S +SF EF+Y +LQAYDF
Sbjct: 128 ANNYDWFGGMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDSGISFTEFSYNLLQAYDF 187

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K Y   LQ+GGSDQWGNI  GIDL  RL   +++ LT PL+T A GTK GKT  GA
Sbjct: 188 ACLNKAYGVALQIGGSDQWGNITSGIDLTRRLHQQQVYGLTVPLITKADGTKFGKTEGGA 247

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + M EI+ +    K  GK    A+ +
Sbjct: 248 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSMEEINALEEEDKNSGK-APRAQYV 306

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS-----------QHMPTISISKDEVSRGM 350
           +A  +T MVHG E    A       F  ++H              MPTI     E+SR  
Sbjct: 307 LAENVTGMVHGAEGLAAAKRITDSLFSGNLHDMTEADFAQLAQDGMPTI-----ELSRDA 361

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKIN 380
            L   +V A    S  +AR  + SNA+ IN
Sbjct: 362 DLQQALVNAELVPSRGQARTMINSNAVAIN 391


>gi|311279500|ref|YP_003941731.1| tyrosyl-tRNA synthetase [Enterobacter cloacae SCF1]
 gi|308748695|gb|ADO48447.1| tyrosyl-tRNA synthetase [Enterobacter cloacae SCF1]
          Length = 424

 Score =  294 bits (753), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 161/422 (38%), Positives = 237/422 (56%), Gaps = 13/422 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 4   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++     +QE ++KI+   + F+ +  G   A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTEDTVQEWVDKIRKQVAPFLDFDCGDNSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDF 184
            NN  W   +  +  LR+IG  FSVN+M++ E+V+ RL R+ Q +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGGMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDQGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K +   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 184 ACLNKLHGVALQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+ +    K  GK    A+ +
Sbjct: 244 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMDIEEINALEEEDKNSGK-APRAQYV 302

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTL 355
           +A ++T +VHG E    A       F+ ++ S      + +    +   E+ +G  L+  
Sbjct: 303 LADQVTRLVHGEEGLAAAKRITESLFNGTLSSLSEADFEQLAQDGVPMVEMEKGADLMQA 362

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +V +    S  +AR+ + SNAI IN    S+ +      D        L  GKKN+  C 
Sbjct: 363 LVDSELQPSRGQARKTIASNAITINGEKQSDPEYAFVDGDRLYGRYTLLRRGKKNY--CL 420

Query: 416 LC 417
           +C
Sbjct: 421 IC 422


>gi|257869086|ref|ZP_05648739.1| tyrosyl-tRNA synthetase [Enterococcus gallinarum EG2]
 gi|257803250|gb|EEV32072.1| tyrosyl-tRNA synthetase [Enterococcus gallinarum EG2]
          Length = 420

 Score =  294 bits (753), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 160/423 (37%), Positives = 239/423 (56%), Gaps = 21/423 (4%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           SDF   L  RG +HQ ++   L    ++  V  YIG+D TA SLH GHL  +++L   Q+
Sbjct: 3   SDFFEELKSRGLVHQTTDESALIKQLNEESVKLYIGFDPTADSLHIGHLLPILMLRRFQQ 62

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH PI+L+GGGT +IGDPSF+D+ R++     ++E  + IK   S FI +      A++
Sbjct: 63  RGHVPIALVGGGTGMIGDPSFKDQERQLNTLDTVKEWSQSIKNQLSRFIDFEDQTNPAIL 122

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
            NN  WL  +K ID LR++G  F++N M+S ESV+ R+  E  +S+ EF Y +LQAYDF+
Sbjct: 123 ANNYDWLGELKLIDFLRDVGKNFTINYMMSKESVKRRI--ETGISYTEFAYQLLQAYDFL 180

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L   + C LQ+GGSDQWGNI  GI+L  R +  + F LT PL+T A GTK GKT   A+
Sbjct: 181 NLYDEHGCLLQLGGSDQWGNITSGIELLRREREVQGFGLTMPLITKADGTKFGKTEGNAV 240

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIA 303
           WL+ + T+PY F+Q+W N DD D V F K  T L + EI  + K  L   E   A+K +A
Sbjct: 241 WLDADKTTPYEFYQFWINTDDRDAVKFLKYFTFLSLEEIAAIEKEFLAAPETRVAQKALA 300

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLL 353
            E+TT+VHG +  E+A   +   F+  I            + +PT  +S D+    + ++
Sbjct: 301 KEVTTLVHGAKAYEQAVHISESLFNGDIKGLSADEIAQGFKGVPTYQVSNDD---ELNIV 357

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN--IKLSFGKKNH 411
            L+  +    S  +AR  +++ AI +N      ++L   + + D  G   + +  GKK +
Sbjct: 358 ELLTTSKIEASKRQAREDIQNGAIYVNGE--RQQELNYVINEEDRIGGKYVVIRRGKKKY 415

Query: 412 IIC 414
            + 
Sbjct: 416 FLL 418


>gi|89095105|ref|ZP_01168031.1| tyrosyl-tRNA synthetase [Oceanospirillum sp. MED92]
 gi|89080600|gb|EAR59846.1| tyrosyl-tRNA synthetase [Oceanospirillum sp. MED92]
          Length = 432

 Score =  294 bits (753), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 158/389 (40%), Positives = 234/389 (60%), Gaps = 19/389 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L  RG + Q+++  EL+   ++G VT Y G+D TA SLH G L  L+ L   Q+ G
Sbjct: 5   LLQDLKARGLVAQMTSEEELEKHLAEGSVTLYCGFDPTADSLHIGSLVPLLTLKRFQEFG 64

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKP++L+GG T +IGDPSF+ + R++     +   +EK+K   S+F+ + +G   A ++N
Sbjct: 65  HKPLALVGGATGLIGDPSFKAQERKLNDDSTVAGWVEKLKAQVSAFVDFESGANSAEVVN 124

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDFVE 186
           N  W  ++  +  LR+IG  FSVN+M++ ESV+ R+ RE + +SF EF YMILQ+YDF +
Sbjct: 125 NLDWTQNVDILSFLRDIGKHFSVNQMIAKESVKQRIDREGEGISFTEFTYMILQSYDFQQ 184

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L  +++C LQ+GGSDQWGNI  G +L  R+   ++F LT PL+T + GTK GKT SG IW
Sbjct: 185 LNASHNCTLQIGGSDQWGNITGGTELTRRMNGNQVFGLTLPLITKSDGTKFGKTESGTIW 244

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM----AKLQGKEINEAKKII 302
           L+   TSPY F+Q+W    DADV  F K  T L +SEID +    A+ QG+   EA++++
Sbjct: 245 LDANKTSPYAFYQFWLQTADADVYRFLKYFTFLSVSEIDALEKEDAERQGRP--EAQRVL 302

Query: 303 ATEITTMVHGRE--EAEKAATAAMECFDMSIHSQH---------MPTISISKDEVSRGMG 351
           A E+T +VHG E   A K  T A+   D S  S+          +P+  +    V+    
Sbjct: 303 AEEVTHLVHGEEGLAAAKRITEALFSGDTSNLSEQDYAQLAQDGLPSSELDVSAVAE-QP 361

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKIN 380
           L T++  AG A S  + +  L+ NA+ +N
Sbjct: 362 LTTILSDAGMAPSGKQVKDALQRNAVIVN 390


>gi|238762512|ref|ZP_04623482.1| Tyrosyl-tRNA synthetase [Yersinia kristensenii ATCC 33638]
 gi|238699157|gb|EEP91904.1| Tyrosyl-tRNA synthetase [Yersinia kristensenii ATCC 33638]
          Length = 428

 Score =  294 bits (753), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 160/398 (40%), Positives = 232/398 (58%), Gaps = 21/398 (5%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG ++ Y G+D TA SLH GHL  L+ L   Q 
Sbjct: 8   SNLIKQLQERGLVAQVTDENALAERLAQGPISLYCGFDPTADSLHLGHLVPLLCLKRFQL 67

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+P++L+GG T +IGDPSF+   R++     + E +EKI+   S F+ +  G+  A+ 
Sbjct: 68  AGHRPVALVGGATGMIGDPSFKASERKLNTEDTVNEWVEKIRRQVSPFLDFNCGENSAIA 127

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQS-LSFLEFNYMILQAYDF 184
            NN  W   +  +  LR+IG  FSVN+M++ E+V+ RL R+ S +SF EF+Y +LQAYDF
Sbjct: 128 ANNYDWFGGMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDSGISFTEFSYNLLQAYDF 187

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K +   LQ+GGSDQWGNI  GIDL  RL   +++ LT PL+T A GTK GKT  GA
Sbjct: 188 ACLNKAHGVALQIGGSDQWGNITSGIDLTRRLHQQQVYGLTVPLITKADGTKFGKTEGGA 247

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + ++EI+ +    K  GK    A+ +
Sbjct: 248 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSLAEINALEEEDKNSGK-APRAQYV 306

Query: 302 IATEITTMVHGRE--EAEKAATAAMECFDMS---------IHSQHMPTISISKDEVSRGM 350
           +A  +T MVHG E   A K  TA++   D++         +    MPTI     E++R  
Sbjct: 307 LAENVTGMVHGEEGLAAAKRITASLFSGDLNQMTEADFAQLAQDGMPTI-----ELTRDA 361

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEK 388
            L   +V A    S  +AR  + SNA+ IN   +S+ +
Sbjct: 362 DLQQALVNAELVPSRGQARTMISSNAVAINGEKLSDPE 399


>gi|157370459|ref|YP_001478448.1| tyrosyl-tRNA synthetase [Serratia proteamaculans 568]
 gi|189029771|sp|A8GDY0|SYY_SERP5 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|157322223|gb|ABV41320.1| tyrosyl-tRNA synthetase [Serratia proteamaculans 568]
          Length = 424

 Score =  294 bits (752), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 159/405 (39%), Positives = 224/405 (55%), Gaps = 21/405 (5%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q 
Sbjct: 4   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQL 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++  ++ + E ++KI+   S F+ +  G   A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTTETVNEWVDKIRKQVSPFLDFDCGSNSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQS-LSFLEFNYMILQAYDF 184
            NN  W   +  +  LR+IG  FSVN+M++ E+V+ RL R+ S +SF EF+Y +LQ +DF
Sbjct: 124 ANNYDWFGGMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDSGISFTEFSYNLLQGFDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
            EL   +   LQ+GGSDQWGNI  GIDL  R+   ++F LT PL+T A GTK GKT  GA
Sbjct: 184 SELYNRHQVELQIGGSDQWGNITSGIDLTRRMHQQQVFGLTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKI 301
           +WL  E TSPY F+Q+W N  DADV  F K  T + ++EI+ +    K  GK    A+ +
Sbjct: 244 VWLAPEKTSPYKFYQFWINTADADVYRFLKFFTFMDLAEINALEEEDKNSGK-APRAQYV 302

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIH-----------SQHMPTISISKDEVSRGM 350
           +A E+T MVHG E    A       F  ++H              MPTI +  D      
Sbjct: 303 LAEEVTGMVHGAEGLAAAKRITQSLFSGALHEMTEADFAQLAQDGMPTIKLDGD-----A 357

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
            L   +V A    S  +AR  + SNA+ IN    SN +      D
Sbjct: 358 DLQQALVNAELVPSRGQARTMIGSNAVTINGEKQSNAEYNFSDAD 402


>gi|168264629|ref|ZP_02686602.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
 gi|205346947|gb|EDZ33578.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
          Length = 424

 Score =  294 bits (752), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 165/423 (39%), Positives = 242/423 (57%), Gaps = 15/423 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 4   SNLIKQLQERGLVAQVTDEDALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +QE + KI+   + F+ +  G+  A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVAKIRKQVAPFLDFDCGENSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDF 184
            NN  W  S+  +  LR+IG  FSVN+M++ E+V+ RL R +Q +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGSMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDQGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K +   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 184 ACLNKLHGVALQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKI 301
           +WL+ + TS Y F+Q+W N  DADV  F K  T + + EI+ +    K  GK    A+ +
Sbjct: 244 VWLDPKKTSLYKFYQFWINTADADVYRFLKFFTFMDIEEINALEEEDKNSGK-APRAQYV 302

Query: 302 IATEITTMVHGREEAEKAATAAMEC-FDMSIHS------QHMPTISISKDEVSRGMGLLT 354
           +A ++T +VHG EE   AA    EC F  S+ +      + +    +   E+ +G  L+ 
Sbjct: 303 LAEQVTRLVHG-EEGLVAAKRITECLFSGSLSALSEADFEQLAQDGVPMVEMEKGADLMQ 361

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +V A    S  +AR+ + SNA+ IN    S+ +     +D        L  GKKN+  C
Sbjct: 362 ALVDAELQPSRGQARKTIASNAVTINGEKQSDPEYIFNDEDRLFGRYTLLRRGKKNY--C 419

Query: 415 HLC 417
            +C
Sbjct: 420 LIC 422


>gi|294501547|ref|YP_003565247.1| tyrosyl-tRNA synthetase [Bacillus megaterium QM B1551]
 gi|294351484|gb|ADE71813.1| tyrosyl-tRNA synthetase [Bacillus megaterium QM B1551]
          Length = 419

 Score =  294 bits (752), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 157/383 (40%), Positives = 229/383 (59%), Gaps = 11/383 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D L  L  RG I+Q ++ + L  L S+  V  Y G+D TA SLH GH+  +++L   Q+ 
Sbjct: 2   DILQDLEFRGLINQQTDEKGLSELLSKESVRLYCGFDPTADSLHIGHMLPVLILRRFQQA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI+L+GGGT +IGDPS +   R +   + +    E+IKG  S F+ +  G+  A++ 
Sbjct: 62  GHQPIALVGGGTGLIGDPSGKKAERTLNEKETVAMFSERIKGQLSRFLDFEEGENAAVIA 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W+ S+  I  LR+IG  F +N M++ +SV+SR+  E  +SF EF+YMILQ+YDF+ 
Sbjct: 122 NNYDWIGSLDVITFLRDIGKNFGINYMMAKDSVQSRI--ESGISFTEFSYMILQSYDFLN 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKT-PKLFALTSPLLTTASGTKMGKTLSGAI 245
           L + Y+C+LQ+GGSDQWGNI  G++L  + +   K F LT PL+T A GTK GKT  GAI
Sbjct: 180 LYQTYNCKLQIGGSDQWGNITAGLELIRKSEEDAKAFGLTVPLVTKADGTKFGKTEGGAI 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA--KLQGKEINEAKKIIA 303
           WL+ E TSPY F+Q+W N DD DV+ + K  T L   EI+ +A    +  E  EA+K +A
Sbjct: 240 WLDPEKTSPYEFYQFWINTDDRDVIKYLKYFTFLSHEEINELAASAKEAPEKREAQKALA 299

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV------SRGMGLLTLIV 357
             +TT+VHG E  E+A   +   F  SI       I     +V         +GL+ L+V
Sbjct: 300 AAMTTLVHGEEALEQAIRISQALFSGSISELTAEEIKQGFKDVPSYTHTGENIGLIDLLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKIN 380
           ++  + S  +AR  + + AI +N
Sbjct: 360 ESKISPSKRQAREDISNGAIYLN 382


>gi|219685485|ref|ZP_03540303.1| tyrosine--tRNA ligase [Borrelia garinii Far04]
 gi|219673041|gb|EED30062.1| tyrosine--tRNA ligase [Borrelia garinii Far04]
          Length = 405

 Score =  293 bits (751), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 157/401 (39%), Positives = 240/401 (59%), Gaps = 7/401 (1%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L++L +RGF+ Q ++ + L  L  +  +  Y G D T+SSLH GHL   + +  L++ GH
Sbjct: 5   LNLLYKRGFLKQCTSLKVLSDLMDREKIVFYAGVDATSSSLHIGHLIPFLAMMHLREHGH 64

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
            PI L+G  T+ IGDPS + E R+++ S+EI  N   IK       ++ +    +  ++N
Sbjct: 65  MPIILIGDSTAKIGDPSGKSEMRKILSSEEINNNALSIKNQLQRITRFSS----SCFIHN 120

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL ++ YI+ LR+IG  FSVNRMLSFE+ + RL  +  LSF+EFNY +LQ+YD+  L 
Sbjct: 121 SNWLDNLNYIEFLRDIGIHFSVNRMLSFETYKRRL--DFGLSFIEFNYQLLQSYDYYMLN 178

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
           K  +CRLQ+GG DQWGNI+ G+DL  R    + F +T PL+T + G KMGK+  GA++L+
Sbjct: 179 KIKNCRLQIGGDDQWGNIVSGVDLIRRKMRVEAFGVTFPLITRSDGKKMGKSEKGAVYLD 238

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITT 308
             + S Y+F+QY+RN  D+DV +F    T L   EI+ ++  +G  +N+AK+I+A EIT 
Sbjct: 239 SSLYSIYDFYQYFRNTSDSDVKTFLYLFTFLEEDEIELISNFKGNSLNKAKEILAFEITK 298

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
           +VHG  EA KA  A+   F  S    ++P    S   +   + L+ L++ +    S +E 
Sbjct: 299 IVHGEAEALKAQEASFAAFRGSGDRSNIPFFKFSFSGLEEEILLINLMLDSKIVPSKSEG 358

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
           RR + S  + IN   + N+   I  +DF++   I+L  GKK
Sbjct: 359 RRLINSGGVYINGKRVENQNHCITREDFNNN-EIELRVGKK 398


>gi|322833470|ref|YP_004213497.1| tyrosyl-tRNA synthetase [Rahnella sp. Y9602]
 gi|321168671|gb|ADW74370.1| tyrosyl-tRNA synthetase [Rahnella sp. Y9602]
          Length = 424

 Score =  293 bits (751), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 163/418 (38%), Positives = 235/418 (56%), Gaps = 11/418 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG I Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q 
Sbjct: 4   SNLIKQLQERGLIAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQL 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++  ++ + E +EKI+   S F+ +  G+  A+ 
Sbjct: 64  NGHKPVALVGGATGLIGDPSFKATERKLNTNETVNEWVEKIRQQVSPFLDFSCGENSAIT 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQS-LSFLEFNYMILQAYDF 184
            NN  W  S+  +  LR+IG  FSVN+M++ E+V+ RL R+ S +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGSMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDSGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L   +   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  GA
Sbjct: 184 ASLYDLHKVELQIGGSDQWGNITSGIDLTRRLHQKQVFGLTVPLITKSDGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + +I+ +    K  GK    A+ +
Sbjct: 244 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEDINALEEEDKTSGK-APRAQYV 302

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQ-HMPTISISKD-----EVSRGMGLLTL 355
           +A E+T MVHG E    A       F  S+     +    +++D     EV R   L   
Sbjct: 303 LAEEVTGMVHGAEGLAAAKRITQSLFSGSLSEMTEVDFGQLAQDGLELFEVPRDTDLQQA 362

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
           +V AG A S  +AR  + SNA+ +N    ++ +      D        L  GKKN+ +
Sbjct: 363 LVIAGMAPSKGQARTMISSNAVSVNGEKQTDTEYSFADSDRLFGRYTLLRRGKKNYTL 420


>gi|295706895|ref|YP_003599970.1| tyrosyl-tRNA synthetase [Bacillus megaterium DSM 319]
 gi|294804554|gb|ADF41620.1| tyrosyl-tRNA synthetase [Bacillus megaterium DSM 319]
          Length = 419

 Score =  293 bits (751), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 156/387 (40%), Positives = 234/387 (60%), Gaps = 19/387 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D L  L  RG I+Q ++ + L  L S+  V  Y G+D TA SLH GH+  +++L   Q+ 
Sbjct: 2   DILQDLEFRGLINQQTDEKGLSELLSKESVRLYCGFDPTADSLHIGHMLPVLILRRFQQA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI+L+GGGT +IGDPS +   R +   + +    E+IKG  S F+ +  G+  A++ 
Sbjct: 62  GHQPIALVGGGTGLIGDPSGKKAERTLNEKETVAMFSERIKGQLSRFLDFEEGENAAVIA 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W+ S+  I  LR+IG  F +N M++ +SV+SR+  E  +SF EF+YMILQ+YDF+ 
Sbjct: 122 NNYDWIGSLDVITFLRDIGKNFGINYMMAKDSVQSRI--ESGISFTEFSYMILQSYDFLN 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKT-PKLFALTSPLLTTASGTKMGKTLSGAI 245
           L + Y+C+LQ+GGSDQWGNI  G++L  + +   K F LT PL+T A GTK GKT  GAI
Sbjct: 180 LYQTYNCKLQIGGSDQWGNITAGLELIRKSEEDAKAFGLTVPLVTKADGTKFGKTEGGAI 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA--KLQGKEINEAKKIIA 303
           WL+ E TSPY F+Q+W N DD DV+ + K  T L   EI+ +A    +  E  EA+K +A
Sbjct: 240 WLDPEKTSPYEFYQFWINTDDRDVIKYLKYFTFLSHEEINELAASAKEAPEKREAQKALA 299

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLL 353
             +TT+VHG E  E+A   +   F  SI            + +P+ + + +++    GL+
Sbjct: 300 AAMTTLVHGEEALEQAIRISQALFSGSISELTAEEIKQGFKDVPSYTHTGEDI----GLI 355

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKIN 380
            L+V++  + S  +AR  + + AI +N
Sbjct: 356 DLLVESKISPSKRQAREDISNGAIYLN 382


>gi|270261633|ref|ZP_06189906.1| tyrosyl-tRNA synthetase [Serratia odorifera 4Rx13]
 gi|270045117|gb|EFA18208.1| tyrosyl-tRNA synthetase [Serratia odorifera 4Rx13]
          Length = 424

 Score =  293 bits (750), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 158/396 (39%), Positives = 221/396 (55%), Gaps = 21/396 (5%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q 
Sbjct: 4   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQL 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++  ++ + E +EKI+   S F+ +  G   A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTAETVNEWVEKIRKQVSPFLDFDCGSNSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQS-LSFLEFNYMILQAYDF 184
            NN  W   +  +  LR+IG  FSVN+M++ E+V+ RL R+ S +SF EF+Y +LQ +DF
Sbjct: 124 ANNYDWFGGMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDSGISFTEFSYNLLQGFDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
            EL   +   LQ+GGSDQWGNI  GIDL  R+   ++F LT PL+T A GTK GKT  GA
Sbjct: 184 SELYNRHQVELQIGGSDQWGNITSGIDLTRRMHQKQVFGLTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKI 301
           +WL  E TSPY F+Q+W N  DADV  F K  T + + +I+ +    K  GK    A+ +
Sbjct: 244 VWLAPEKTSPYKFYQFWINTADADVYRFLKFFTFMSLEDINALEEEDKNSGK-APRAQYV 302

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIH-----------SQHMPTISISKDEVSRGM 350
           +A E+T MVHG E    A       F  ++H              MPTI +  D      
Sbjct: 303 LAEEVTGMVHGAEGLAAAKRITQSLFSGALHEMTEADFAQLAQDGMPTIKLDGD-----A 357

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISN 386
            L   +V A    S  +AR  + SNA+ IN    SN
Sbjct: 358 DLQQALVNAELVPSRGQARTMIGSNAVTINGEKQSN 393


>gi|157145898|ref|YP_001453217.1| tyrosyl-tRNA synthetase [Citrobacter koseri ATCC BAA-895]
 gi|189083646|sp|A8AH18|SYY_CITK8 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|157083103|gb|ABV12781.1| hypothetical protein CKO_01649 [Citrobacter koseri ATCC BAA-895]
          Length = 428

 Score =  293 bits (750), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 159/422 (37%), Positives = 238/422 (56%), Gaps = 13/422 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 8   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 67

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++     +QE ++KI+   + F+ +  G   A+ 
Sbjct: 68  AGHKPVALVGGATGLIGDPSFKAAERKLNTEDTVQEWVDKIRKQVAPFLDFDCGDNSAIA 127

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDF 184
            NN  W   +  +  LR+IG  FSVN+M++ E+V+ RL R+ Q +SF EF+Y +LQ YDF
Sbjct: 128 ANNYDWFGGMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDQGISFTEFSYNLLQGYDF 187

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K +   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 188 ACLNKLHGVTLQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 247

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + ++EI+ +    K  GK    A+ +
Sbjct: 248 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMDIAEINALEEEDKNSGK-APRAQYV 306

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTL 355
           +A ++T +VHG E    A       F+ ++        + +    +   E+ +G  L+  
Sbjct: 307 LAEQVTRLVHGEEGLVAAKRITESLFNGNLSDLSEADFEQLAQDGVPMIEMEKGADLMQA 366

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +V +    S  +AR+ + SNA+ IN    S+ +   +  D        L  GKKN+  C 
Sbjct: 367 LVDSELQPSRGQARKTIASNAVTINGEKQSDPEYFFQDSDILFGRYTLLRRGKKNY--CL 424

Query: 416 LC 417
           +C
Sbjct: 425 IC 426


>gi|224533242|ref|ZP_03673842.1| tyrosine--tRNA ligase [Borrelia burgdorferi WI91-23]
 gi|225549129|ref|ZP_03770104.1| tyrosyl-tRNA synthetase [Borrelia burgdorferi 94a]
 gi|224511969|gb|EEF82370.1| tyrosine--tRNA ligase [Borrelia burgdorferi WI91-23]
 gi|225370355|gb|EEG99793.1| tyrosyl-tRNA synthetase [Borrelia burgdorferi 94a]
          Length = 405

 Score =  293 bits (750), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 156/404 (38%), Positives = 241/404 (59%), Gaps = 7/404 (1%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           LS+L +RGF+ Q ++ + L  L  +  +  Y G D T+SSLH GHL   + +  L++ GH
Sbjct: 5   LSLLHKRGFLKQCTSLKVLSDLMDREKIVFYAGVDATSSSLHIGHLIPFLAMMHLRQHGH 64

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
            PI L+G  T+ IGDPS + E R+++ S+EI  N   IK       K+    T    ++N
Sbjct: 65  MPIVLIGDSTAKIGDPSGKSEMRKILSSEEIGNNALLIKNQLQRITKF----TSECFIHN 120

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL ++ YI+ LR++G  FSVNRMLSFE+ + R+  +  LSF+EFNY +LQ+YD+  L 
Sbjct: 121 SNWLDNLNYIEFLRDVGIHFSVNRMLSFETYKRRM--DFGLSFIEFNYQLLQSYDYYMLN 178

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
           K  +CRLQ+GG DQWGNII G+DL  +    + F LT PL+T + G KMGK+  GA++L+
Sbjct: 179 KIKNCRLQIGGDDQWGNIISGVDLIRKKNGSETFGLTFPLITRSDGKKMGKSEKGAVYLD 238

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITT 308
             + S Y+F+QY+RN  D+DV +F    T L   EI+ ++  +G  +N+AK+I+A EIT 
Sbjct: 239 SNLFSVYDFYQYFRNTSDSDVKTFLYLFTFLKEDEIELISNFKGNSLNKAKEILAFEITK 298

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
           +VHG  EA K   A+   F  S    ++P    S   +   + L+ L++ +   +S +E 
Sbjct: 299 IVHGEAEALKVQEASFAAFRGSGDRSNIPFFKFSFSSLKEEILLVDLMLDSKIVSSKSEG 358

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           RR + S  + IN   + ++   +  +DF++   ++L  GKKN +
Sbjct: 359 RRLIDSGGVYINGKRVESQSHLLTKKDFNNN-EVELRVGKKNFL 401


>gi|281356701|ref|ZP_06243192.1| tyrosyl-tRNA synthetase [Victivallis vadensis ATCC BAA-548]
 gi|281316828|gb|EFB00851.1| tyrosyl-tRNA synthetase [Victivallis vadensis ATCC BAA-548]
          Length = 427

 Score =  293 bits (750), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 163/420 (38%), Positives = 239/420 (56%), Gaps = 27/420 (6%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RGF +Q ++   ++ L +   V  Y+G+D T +SLH GHL  +M +  +QK GH PI
Sbjct: 7   LKARGFCYQQTDEEAIEKLLTTEQVKFYVGFDPTGNSLHVGHLLPVMAMRLMQKAGHIPI 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+GG T+ IGDPS R  +R MM  + I+EN+  ++     FI  G GK  A  +NN  W
Sbjct: 67  VLVGGATAQIGDPSGRISARPMMTLETIEENVRCLRNQLKRFIDDGDGK--AHFVNNADW 124

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           LC I YI++LRE+GS FSVNRML+ ESV+SRL  E  LSFLEFNY ILQ YDF  L +++
Sbjct: 125 LCKIGYIEMLREVGSIFSVNRMLAQESVKSRL--ENGLSFLEFNYSILQGYDFYILNRDF 182

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA-IWLNKE 250
            C+L+MGG DQWGN++ G +L  R    ++  +T PLL  ++G K GKT  G  +WL+  
Sbjct: 183 GCKLEMGGQDQWGNMVAGTELVRRKSGNEVQCMTIPLLMNSNGQKFGKTSGGTNVWLDVN 242

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMV 310
            TS ++++Q+WRN DDA V       + LP+ EI R+    G  IN AK+I+A E T + 
Sbjct: 243 RTSVFDYYQFWRNSDDAQVEKLMLYFSPLPIDEIKRICDPAGN-INRAKEILAYEATCLA 301

Query: 311 HGREEAEK------------------AATAAMECFDMSIHSQHMPTISISKD--EVSRGM 350
           HG   A +                  A T+++   D +     +PT  I     +   G+
Sbjct: 302 HGEAAAREAFVTAGTRFGFADPEKKVATTSSILTVDTANVQAELPTAEIDGAVFDDPAGV 361

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            +  L+V AG   S ++ RR ++  A+ I++  +++    +    F + G++ L  GKKN
Sbjct: 362 TVAKLLVLAGLCKSNSDGRRLIQGGAVSIDDEKVADPVAAVTRDSFKA-GSLTLRAGKKN 420


>gi|238792277|ref|ZP_04635912.1| Tyrosyl-tRNA synthetase [Yersinia intermedia ATCC 29909]
 gi|238728514|gb|EEQ20033.1| Tyrosyl-tRNA synthetase [Yersinia intermedia ATCC 29909]
          Length = 428

 Score =  293 bits (750), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 161/390 (41%), Positives = 227/390 (58%), Gaps = 21/390 (5%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG ++ Y G+D TA SLH GHL  L+ L   Q 
Sbjct: 8   SNLIKQLQERGLVAQVTDEDALAERLAQGPISLYCGFDPTADSLHLGHLVPLLCLKRFQL 67

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+P++L+GG T +IGDPSF+   R++     + E +EKI+   S F+ +  G+  A+ 
Sbjct: 68  AGHRPVALVGGATGMIGDPSFKASERKLNTEDTVNEWVEKIRRQVSPFLDFDCGENSAIA 127

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQS-LSFLEFNYMILQAYDF 184
            NN  W   +  +  LR+IG  FSVN+M++ E+V+ RL R+ S +SF EF+Y +LQAYDF
Sbjct: 128 ANNYDWFGGMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDSGISFTEFSYNLLQAYDF 187

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K +   LQ+GGSDQWGNI  GIDL  RL   +++ LT PL+T A GTK GKT  GA
Sbjct: 188 ACLNKAHGVALQIGGSDQWGNITSGIDLTRRLHQQQVYGLTVPLITKADGTKFGKTEGGA 247

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + M EI+ +    K  GK    A+ +
Sbjct: 248 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSMEEINALEDEDKNSGK-APRAQYV 306

Query: 302 IATEITTMVHGRE--EAEKAATAAMECFDMS---------IHSQHMPTISISKDEVSRGM 350
           +A  +T MVHG E   A K  TA++   D++         +    MPTI     E+SR  
Sbjct: 307 LAENVTGMVHGAEGLAAAKRITASLFSGDLNEMTEADFAQLAQDGMPTI-----ELSRDA 361

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKIN 380
            L   +V A    S  +AR  + SNA+ IN
Sbjct: 362 DLQQALVNAELVPSRGQARTMIGSNAVAIN 391


>gi|257875423|ref|ZP_05655076.1| tyrosyl-tRNA synthetase [Enterococcus casseliflavus EC20]
 gi|257809589|gb|EEV38409.1| tyrosyl-tRNA synthetase [Enterococcus casseliflavus EC20]
          Length = 420

 Score =  293 bits (749), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 161/423 (38%), Positives = 241/423 (56%), Gaps = 21/423 (4%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +DF   L +RG +HQ ++   L    ++  V  YIG+D TA SLH GHL  +++L   Q+
Sbjct: 3   TDFFEELKQRGLVHQTTDEAALTKQLNEESVKLYIGFDPTADSLHIGHLLPILMLRRFQQ 62

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH PI+L+GGGT +IGDPSF+D+ R++     + E  + IK   S FI +   +  A++
Sbjct: 63  NGHVPIALVGGGTGMIGDPSFKDQERQLNTLDTVLEWSQSIKSQLSRFIDFDDQENPAII 122

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
            NN  WL  +K ID LR+ G  F++N M+S ESV+ R+  E  +S+ EF Y +LQAYDF+
Sbjct: 123 ANNYEWLGELKLIDFLRDTGKNFTINYMMSKESVKRRI--ETGISYTEFAYQLLQAYDFL 180

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L  N+ C LQ+GGSDQWGNI  GI+L  R +  + F LT PL+T A GTK GKT   A+
Sbjct: 181 NLYDNHGCLLQLGGSDQWGNITSGIELLRREREVQGFGLTMPLITKADGTKFGKTEGNAV 240

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM-AKLQ-GKEINEAKKIIA 303
           WL+ + T+PY F+Q+W N DD D V F K  T L + EI  + A+     E   A+K +A
Sbjct: 241 WLDAKKTTPYEFYQFWINTDDRDAVKFLKYFTFLSLEEIAAIEAEFNAAPESRAAQKALA 300

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLL 353
            E+TT+VHG E  E+A   +   F  +I            + +P+  ++ D+    + ++
Sbjct: 301 KEVTTLVHGAEAYEQAVRISASLFSGNIKELNAEEIEQGFKGVPSHQVTADD---SLNIV 357

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN--IKLSFGKKNH 411
            ++  A    S  +AR  +++ AI IN   + +  L  +LQ  D  G   + +  GKK +
Sbjct: 358 EVLTTAKIEPSKRQAREDVQNGAIYINGERVQD--LTYELQASDRIGGKYVVIRRGKKKY 415

Query: 412 IIC 414
            + 
Sbjct: 416 FLL 418


>gi|206580905|ref|YP_002238204.1| tyrosyl-tRNA synthetase [Klebsiella pneumoniae 342]
 gi|254783610|sp|B5XWP0|SYY_KLEP3 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|206569963|gb|ACI11739.1| tyrosyl-tRNA synthetase [Klebsiella pneumoniae 342]
          Length = 426

 Score =  293 bits (749), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 150/385 (38%), Positives = 226/385 (58%), Gaps = 11/385 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 4   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++     +QE ++KI+   + F+ +  G   A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTEDTVQEWVDKIRKQVAPFLDFDCGDNSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDF 184
            NN  W  S+  +  LR+IG  FSVN+M++ E+V+ RL R+ Q +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGSMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDQGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K +   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 184 ACLNKLHGVALQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + M+EI+ +    K  GK    A+ +
Sbjct: 244 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMDMAEINALEEEDKNSGK-APRAQYV 302

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTL 355
           +A ++T +VHG E  E A       F+ ++        + +    +   E+ +G  L+  
Sbjct: 303 LAEQVTRLVHGEEGLEAAKRITESLFNGNLSDLSESDFEQLAQDGMPMVELEKGTDLMQA 362

Query: 356 IVKAGFATSTNEARRHLKSNAIKIN 380
           +V++    S  +AR+ + +N + +N
Sbjct: 363 LVESELQPSRGQARKAIAANGVTVN 387


>gi|283833254|ref|ZP_06352995.1| tyrosine--tRNA ligase [Citrobacter youngae ATCC 29220]
 gi|291070890|gb|EFE08999.1| tyrosine--tRNA ligase [Citrobacter youngae ATCC 29220]
          Length = 428

 Score =  293 bits (749), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 159/422 (37%), Positives = 237/422 (56%), Gaps = 13/422 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 8   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 67

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++     +QE ++KI+   + F+ +  G   A+ 
Sbjct: 68  AGHKPVALVGGATGLIGDPSFKAAERKLNTEDTVQEWVDKIRKQVAPFLDFDCGDNSAIA 127

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDF 184
            NN  W   +  +  LR+IG  FSVN+M++ E+V+ RL R+ Q +SF EF+Y +LQ YDF
Sbjct: 128 ANNYDWFGGMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDQGISFTEFSYNLLQGYDF 187

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K +   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 188 ACLNKLHGVALQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 247

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+ +    K  GK    A+ +
Sbjct: 248 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMDIEEINALEEEDKNSGK-APRAQYV 306

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTL 355
           +A ++T +VHG E    A       F+ ++        + +    +   E+ +G  L+  
Sbjct: 307 LAEQVTRLVHGEEGLVAAKRITESLFNGNLSDLSEADFEQLAQDGVPMIEMEKGADLMQA 366

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +V +    S  +AR+ + SNA+ IN    S+ +   +  D        L  GKKN+  C 
Sbjct: 367 LVDSELQPSRGQARKTIASNAVTINGEKQSDPEYFFQESDILFGRYTLLRRGKKNY--CL 424

Query: 416 LC 417
           +C
Sbjct: 425 IC 426


>gi|237731399|ref|ZP_04561880.1| tyrosyl-tRNA synthetase [Citrobacter sp. 30_2]
 gi|226906938|gb|EEH92856.1| tyrosyl-tRNA synthetase [Citrobacter sp. 30_2]
          Length = 428

 Score =  293 bits (749), Expect = 5e-77,   Method: Compositional matrix adjust.
 Identities = 159/422 (37%), Positives = 237/422 (56%), Gaps = 13/422 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 8   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 67

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++     +QE ++KI+   + F+ +  G   A+ 
Sbjct: 68  AGHKPVALVGGATGLIGDPSFKAAERKLNTEDTVQEWVDKIRKQVAPFLDFDCGDNSAIA 127

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDF 184
            NN  W   +  +  LR+IG  FSVN+M++ E+V+ RL R+ Q +SF EF+Y +LQ YDF
Sbjct: 128 ANNYDWFGGMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDQGISFTEFSYNLLQGYDF 187

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K +   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 188 ACLNKLHGVALQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 247

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+ +    K  GK    A+ +
Sbjct: 248 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMDIEEINALEEEDKNSGK-APRAQYV 306

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTL 355
           +A ++T +VHG E    A       F+ ++        + +    +   E+ +G  L+  
Sbjct: 307 LAEQVTRLVHGEEGLVAAKRITESLFNGNLSDLSEADFEQLAQDGVPMIEMDKGADLMQA 366

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +V +    S  +AR+ + SNA+ IN    S+ +   +  D        L  GKKN+  C 
Sbjct: 367 LVDSELQPSRGQARKTIASNAVTINGEKQSDPEYFFQDSDILFGRYTLLRRGKKNY--CL 424

Query: 416 LC 417
           +C
Sbjct: 425 IC 426


>gi|223889015|ref|ZP_03623606.1| tyrosyl-tRNA synthetase [Borrelia burgdorferi 64b]
 gi|223885831|gb|EEF56930.1| tyrosyl-tRNA synthetase [Borrelia burgdorferi 64b]
          Length = 405

 Score =  293 bits (749), Expect = 5e-77,   Method: Compositional matrix adjust.
 Identities = 157/401 (39%), Positives = 239/401 (59%), Gaps = 7/401 (1%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           LS+L +RGF+ Q ++ + L  L  +  +  Y G D T+SSLH GHL   + + +L++ GH
Sbjct: 5   LSLLHKRGFLKQCTSLKVLSDLMDREKIVFYAGVDATSSSLHIGHLIPFLAMMYLRQHGH 64

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
            PI L+G  T+ IGDPS + E R+++ S+EI  N   IK       K+    T    ++N
Sbjct: 65  MPIVLIGDSTAKIGDPSGKSEMRKILSSEEIGNNALLIKNQLQRITKF----TSECFIHN 120

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL ++ YI+ LR++G  FSVNRMLSFE+ + RL  +  LSF+EFNY +LQ+YD+  L 
Sbjct: 121 SNWLDNLNYIEFLRDVGIHFSVNRMLSFETYKRRL--DFGLSFIEFNYQLLQSYDYYMLN 178

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
           K  +CRLQ+GG DQWGNII GIDL  +    + F LT PL+T + G KMGK+  GA++L+
Sbjct: 179 KIKNCRLQIGGDDQWGNIISGIDLIRKKNGSETFGLTFPLITRSDGKKMGKSEKGAVYLD 238

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITT 308
             + S Y+F+QY+RN  D+DV +F    T L   EI+ ++  +G  +N+AK+I+A EIT 
Sbjct: 239 SNLFSIYDFYQYFRNTSDSDVKTFLYLFTFLEEDEIELISNFKGNSLNKAKEILAFEITK 298

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
           +VHG  EA K   A+   F  S    ++P    S   +   + L+ L++ +    S +E 
Sbjct: 299 IVHGEAEALKVQEASFAAFRGSGDRSNIPFFKFSFSSLKEEILLVDLMLDSKIVPSKSEG 358

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
           RR + S  + IN   + ++   +  +DF++   ++L  GKK
Sbjct: 359 RRLIDSGGVYINGKRVESQSHLLTKKDFNNN-EVELRVGKK 398


>gi|221217684|ref|ZP_03589152.1| tyrosyl-tRNA synthetase [Borrelia burgdorferi 72a]
 gi|221192361|gb|EEE18580.1| tyrosyl-tRNA synthetase [Borrelia burgdorferi 72a]
          Length = 405

 Score =  293 bits (749), Expect = 5e-77,   Method: Compositional matrix adjust.
 Identities = 157/404 (38%), Positives = 240/404 (59%), Gaps = 7/404 (1%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           LS+L +RGF+ Q ++ + L  L  +  +  Y G D T+SSLH GHL   + +  L++ GH
Sbjct: 5   LSLLHKRGFLKQCTSLKVLSDLMDREKIVFYAGVDATSSSLHIGHLIPFLAMMHLRQHGH 64

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
            PI L+G  T+ IGDPS + E R+++ S+EI  N   IK       K+    T    ++N
Sbjct: 65  MPIVLIGDSTAKIGDPSGKSEMRKILSSEEIGNNALLIKNQLQRITKF----TSECFIHN 120

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL ++ YI+ LR++G  FSVNRMLSFE+ + RL  +  LSF+EFNY +LQ+YD+  L+
Sbjct: 121 SNWLDNLNYIEFLRDVGMHFSVNRMLSFETYKRRL--DFGLSFIEFNYQLLQSYDYYMLS 178

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
           K  +CRLQ+GG DQWGNII G+DL  +    + F LT PL+T + G KMGK+  GA++L+
Sbjct: 179 KIKNCRLQIGGDDQWGNIISGVDLIRKKNGSETFGLTFPLITRSDGKKMGKSEKGAVYLD 238

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITT 308
             + S Y+F+QY+RN  D+DV +F    T L   EI+ ++  +G  +N+AK+I+A EIT 
Sbjct: 239 SNLFSIYDFYQYFRNTSDSDVKTFLYLFTFLEEDEIELISNFKGNSLNKAKEILAFEITK 298

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
           +VHG  EA K   A+   F  S    ++P    S       + L+ L++ +    S +E 
Sbjct: 299 IVHGEAEALKVQEASFAAFRGSGDRSNIPFFKFSFSSPKEEILLVDLMLDSKIVPSKSEG 358

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           RR + S  + IN   + ++   +  +DF++   ++L  GKKN +
Sbjct: 359 RRLIDSGGVYINGKRVESQSHLLTKKDFNNN-EVELRVGKKNFL 401


>gi|320539632|ref|ZP_08039296.1| tyrosyl-tRNA synthetase [Serratia symbiotica str. Tucson]
 gi|320030244|gb|EFW12259.1| tyrosyl-tRNA synthetase [Serratia symbiotica str. Tucson]
          Length = 424

 Score =  292 bits (748), Expect = 5e-77,   Method: Compositional matrix adjust.
 Identities = 158/395 (40%), Positives = 221/395 (55%), Gaps = 19/395 (4%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q 
Sbjct: 4   SNLIKQLQERGLVAQVTDEEALIERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQL 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSFR   R++  S+ + +  EKI+   S F+ +  G   A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFRATERKLNTSETVSQWGEKIRQQVSPFLDFDCGSNSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQS-LSFLEFNYMILQAYDF 184
            NN  W   +  +  LR+IG  FSVN+M++ E+V+ RL R+ S +SF EF+Y +LQ +DF
Sbjct: 124 ANNYDWYGGMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDSGISFTEFSYNLLQGFDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
            EL   +   LQ+GGSDQWGNI  GIDL  R+    +F LT PL+T A GTK GKT  GA
Sbjct: 184 SELYHRHQVELQIGGSDQWGNITSGIDLTRRMHQKPVFGLTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKII 302
           +WL+ E TSPY F+Q+W N +DADV  F K  T L +++I+ + +      +   A+ ++
Sbjct: 244 VWLSAEKTSPYKFYQFWINTEDADVYRFLKFFTFLNLADINALEEEDKNSDQAPRAQYVL 303

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHS-----------QHMPTISISKDEVSRGMG 351
           A E+T MVHG E    A       F   +H              MPTI +S D       
Sbjct: 304 AEEVTGMVHGAEGLAAAKRITQSLFSGVLHDLTEADFAQLAQDGMPTIKLSGD-----AD 358

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISN 386
           L   +V A    S  +AR  + SNA+ IN    SN
Sbjct: 359 LQQALVNAELVPSRGQARTMIVSNAVSINGEKQSN 393


>gi|224534271|ref|ZP_03674849.1| tyrosine--tRNA ligase [Borrelia spielmanii A14S]
 gi|224514373|gb|EEF84689.1| tyrosine--tRNA ligase [Borrelia spielmanii A14S]
          Length = 405

 Score =  292 bits (748), Expect = 6e-77,   Method: Compositional matrix adjust.
 Identities = 158/404 (39%), Positives = 239/404 (59%), Gaps = 7/404 (1%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L++L +RGF+ Q ++ R L  L  +  V  Y G D T++SLH GHL   + +  L++ GH
Sbjct: 5   LNLLHKRGFLKQCTSLRVLSDLMDREKVVFYAGVDATSNSLHIGHLIPFLAMMHLRQHGH 64

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
            PI L+G  T+ IGDPS + E R+++ S+EI  N   IK       K+ +       ++N
Sbjct: 65  IPIVLIGDSTTKIGDPSGKSEMRKILSSEEISNNAFSIKNQLQRITKFSS----TCFIHN 120

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL ++ YI+ LR+IG  FSVNRMLSFE+ + RL  +  LSF+EFNY +LQ+YD+  L 
Sbjct: 121 SNWLDNLNYIEFLRDIGIHFSVNRMLSFETYKRRL--DFGLSFIEFNYQLLQSYDYYMLN 178

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
           K  +CRLQ+GG DQWGNI+ GIDL +R    + F LT PL+T + G KMGK+  GA++L+
Sbjct: 179 KIKNCRLQIGGDDQWGNIVSGIDLIKRKAGVEAFGLTFPLITRSDGKKMGKSEKGAVYLD 238

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITT 308
             + S Y+F+QY+RN  D+DV +F    T L   +I+ ++  +G  +N+AK+I+A EIT 
Sbjct: 239 SSLYSIYDFYQYFRNTSDSDVKTFLYLFTFLEEDKIELISNFKGNSLNKAKEILAFEITK 298

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
           +VHG  EA K   A+   F       ++P    S   +   + L+ L++ +    S +E 
Sbjct: 299 IVHGEAEALKVQEASFAAFRGKGDRSNIPFFKFSFSSLEEVVLLIDLMLDSKIVPSKSEG 358

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           RR + S  + IN   + N    +  +DF++   I+L  GKKN +
Sbjct: 359 RRLINSGGVYINGKRVENPSHCLTREDFNNN-EIELRVGKKNFL 401


>gi|322374092|ref|ZP_08048626.1| tyrosine--tRNA ligase [Streptococcus sp. C150]
 gi|321277058|gb|EFX54129.1| tyrosine--tRNA ligase [Streptococcus sp. C150]
          Length = 418

 Score =  292 bits (748), Expect = 6e-77,   Method: Compositional matrix adjust.
 Identities = 158/417 (37%), Positives = 231/417 (55%), Gaps = 21/417 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  GHKP 
Sbjct: 7   LKARGLIFQTTDEEALVKAFEEGPVSYYTGYDPTADSLHLGHLVAILTSRRLQLAGHKPY 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+D  R +   + ++  +EKI+G  S F+ +  G   A+M+NN  W
Sbjct: 67  ALVGGATGLIGDPSFKDAERSLQTKETVEGWVEKIQGQLSRFLDFENGDNKAVMVNNYDW 126

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
             S+ +ID LR++G +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF EL   Y
Sbjct: 127 FGSVSFIDFLRDVGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFYELNDKY 184

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
              LQ+GGSDQWGN+  G +L  R        +T PL+T ++G K GK+   A+WL+   
Sbjct: 185 GVTLQIGGSDQWGNMTAGTELLRRKADKSGHVITVPLITDSTGKKFGKSEGNAVWLDATK 244

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIATEITTM 309
           T+PY  +Q+W N+ D D V F K  T L + EI+ + K   Q +    A+KI+A E+ T+
Sbjct: 245 TTPYEMYQFWLNVMDDDAVRFLKIFTFLSLEEIEEIGKEFDQARHQRLAQKILAREVVTL 304

Query: 310 VHGREEAEKAATAAMECF----------DMSIHSQHMPTISISKDEVSRGMGLLTLIVKA 359
           VHG+E  E+A     + F          D+ +    +PT  IS DE    + ++ L+V A
Sbjct: 305 VHGKEAYEQAVHITEQLFAGNLKALSARDLKVALHGVPTYEISADE---NLNIVELLVNA 361

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN--IKLSFGKKNHIIC 414
             + S  +AR  +++ AI IN   I +  L   L D D   N    +  GKK + + 
Sbjct: 362 KISPSKRQAREDVQNGAIYINGERIQD--LDYTLSDSDKIDNEITVIRRGKKKNFVL 416


>gi|325569773|ref|ZP_08145797.1| tyrosine--tRNA ligase [Enterococcus casseliflavus ATCC 12755]
 gi|325157078|gb|EGC69244.1| tyrosine--tRNA ligase [Enterococcus casseliflavus ATCC 12755]
          Length = 429

 Score =  292 bits (748), Expect = 6e-77,   Method: Compositional matrix adjust.
 Identities = 158/421 (37%), Positives = 239/421 (56%), Gaps = 17/421 (4%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +DF   L +RG +HQ ++   L    ++  V  YIG+D TA SLH GHL  +++L   Q+
Sbjct: 12  TDFFEELKQRGLVHQTTDEAALTKQLNEESVKLYIGFDPTADSLHIGHLLPILMLRRFQQ 71

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH PI+L+GGGT +IGDPSF+D+ R++     + E  + IK   S FI +   +  A++
Sbjct: 72  NGHVPIALVGGGTGMIGDPSFKDQERQLNTLDTVLEWSQSIKSQLSRFIDFDDQENPAII 131

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
            NN  WL  +K ID LR+ G  F++N M+S ESV+ R+  E  +S+ EF Y +LQAYDF+
Sbjct: 132 ANNYEWLGELKLIDFLRDTGKNFTINYMMSKESVKRRI--ETGISYTEFAYQLLQAYDFL 189

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L  N+ C LQ+GGSDQWGNI  GI+L  R +  + F LT PL+T A GTK GKT   A+
Sbjct: 190 NLYDNHGCLLQLGGSDQWGNITSGIELLRREREVQGFGLTMPLITKADGTKFGKTEGNAV 249

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM-AKLQ-GKEINEAKKIIA 303
           WL+ + T+PY F+Q+W N DD D V F K  T L + EI  + A+     E   A+K +A
Sbjct: 250 WLDAKKTTPYEFFQFWINTDDRDAVKFLKYFTFLSLEEIAVIEAEFNAAPESRAAQKALA 309

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLL 353
            E+TT+VHG E  E+A   +   F  +I            + +P+  ++ D+    + ++
Sbjct: 310 KEVTTLVHGAEAYEQAVRISASLFSGNIKELNAEEIEQGFKGVPSHQVTADD---SLNIV 366

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            ++  A    S  +AR  +++ AI IN   + +   +I+  D      + +  GKK + +
Sbjct: 367 EVLTTAKIEPSKRQAREDVQNGAIYINGERVQDLTYEIQASDRIGGKYVVIRRGKKKYFL 426

Query: 414 C 414
            
Sbjct: 427 L 427


>gi|51596607|ref|YP_070798.1| tyrosyl-tRNA synthetase [Yersinia pseudotuberculosis IP 32953]
 gi|153948792|ref|YP_001400748.1| tyrosyl-tRNA synthetase [Yersinia pseudotuberculosis IP 31758]
 gi|170024120|ref|YP_001720625.1| tyrosyl-tRNA synthetase [Yersinia pseudotuberculosis YPIII]
 gi|186895666|ref|YP_001872778.1| tyrosyl-tRNA synthetase [Yersinia pseudotuberculosis PB1/+]
 gi|81639259|sp|Q66A49|SYY_YERPS RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|189029782|sp|A7FHM0|SYY_YERP3 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|254765191|sp|B2K5H0|SYY_YERPB RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|254765193|sp|B1JJR1|SYY_YERPY RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|51589889|emb|CAH21521.1| tyrosyl-tRNA synthetase [Yersinia pseudotuberculosis IP 32953]
 gi|152960287|gb|ABS47748.1| tyrosyl-tRNA synthetase [Yersinia pseudotuberculosis IP 31758]
 gi|169750654|gb|ACA68172.1| tyrosyl-tRNA synthetase [Yersinia pseudotuberculosis YPIII]
 gi|186698692|gb|ACC89321.1| tyrosyl-tRNA synthetase [Yersinia pseudotuberculosis PB1/+]
          Length = 424

 Score =  292 bits (748), Expect = 6e-77,   Method: Compositional matrix adjust.
 Identities = 157/390 (40%), Positives = 222/390 (56%), Gaps = 21/390 (5%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG ++ Y G+D TA SLH GHL  L+ L   Q 
Sbjct: 4   SNLIKQLQERGLVAQVTDEDALAERLAQGPISLYCGFDPTADSLHLGHLVPLLCLKRFQL 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+P++L+GG T +IGDPSF+   R++     + E +EKI+   S F+ +  G+  A+ 
Sbjct: 64  AGHRPVALVGGATGMIGDPSFKASERKLNTEDTVNEWVEKIRHQVSPFLDFDCGENSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQS-LSFLEFNYMILQAYDF 184
            NN  W   +  +  LR+IG  FSVN+M++ E+V+ RL R+ S +SF EF+Y +LQAYDF
Sbjct: 124 ANNYDWFGGMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDSGISFTEFSYNLLQAYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L KN+   LQ+GGSDQWGNI  GIDL  RL   +++ LT PL+T A GTK GKT  GA
Sbjct: 184 ACLNKNHGVALQIGGSDQWGNITSGIDLTRRLHQQQVYGLTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+ +    K  GK    A+ +
Sbjct: 244 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSLEEINALEEEDKNSGK-APRAQYV 302

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS-----------QHMPTISISKDEVSRGM 350
           +A  +T MVHG E    A       F   +H              MPT+     E++R  
Sbjct: 303 LAENVTGMVHGPEGLAAAKRITESLFSGDLHDMTEADFAQLAQDGMPTV-----ELNRDA 357

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKIN 380
            L   +V A    S  +AR  + SNA+ IN
Sbjct: 358 DLQQALVNAELVPSRGQARTMIGSNAVAIN 387


>gi|293396285|ref|ZP_06640563.1| tyrosine-tRNA ligase [Serratia odorifera DSM 4582]
 gi|291421074|gb|EFE94325.1| tyrosine-tRNA ligase [Serratia odorifera DSM 4582]
          Length = 428

 Score =  292 bits (748), Expect = 7e-77,   Method: Compositional matrix adjust.
 Identities = 155/395 (39%), Positives = 220/395 (55%), Gaps = 21/395 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q  
Sbjct: 9   NLIQQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQLA 68

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP++L+GG T +IGDPSF+   R++  S+ + E ++KI+   S F+ +  G   A+  
Sbjct: 69  GHKPVALVGGATGLIGDPSFKAAERKLNTSETVSEWVDKIRKQVSPFLDFDCGSNSAIAA 128

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYDFV 185
           NN  W   +  +  LR+IG  FSVN+M++ E+V+ RL R+   +SF EF+Y +LQ YDF 
Sbjct: 129 NNYDWFGGMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDVGISFTEFSYNLLQGYDFA 188

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           EL   +   LQ+GGSDQWGNI  GIDL  R+   ++F LT PL+T A GTK GKT  GA+
Sbjct: 189 ELNHRHQVVLQIGGSDQWGNITSGIDLTRRMHQQQVFGLTVPLITKADGTKFGKTEGGAV 248

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKII 302
           WL  E TSPY F+Q+W N  DADV  F K  T + + +I+ +    +  GK    A+ ++
Sbjct: 249 WLAPEKTSPYKFYQFWINTADADVYRFLKFFTFMSLEDINALEAEDRSSGK-APRAQYVL 307

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIH-----------SQHMPTISISKDEVSRGMG 351
           A E+T MVHG +    A       F  ++H              MPTI + KD       
Sbjct: 308 AEEVTRMVHGEQGLAAAQRITQSLFSGALHEMTEADFAQLAQDGMPTIKLDKD-----AD 362

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISN 386
           L   +V A    S  +AR  + SNA+ +N    SN
Sbjct: 363 LQQALVNAELVPSRGQARTMIGSNAVTVNGEKQSN 397


>gi|257865795|ref|ZP_05645448.1| tyrosyl-tRNA synthetase [Enterococcus casseliflavus EC30]
 gi|257872130|ref|ZP_05651783.1| tyrosyl-tRNA synthetase [Enterococcus casseliflavus EC10]
 gi|257799729|gb|EEV28781.1| tyrosyl-tRNA synthetase [Enterococcus casseliflavus EC30]
 gi|257806294|gb|EEV35116.1| tyrosyl-tRNA synthetase [Enterococcus casseliflavus EC10]
          Length = 420

 Score =  292 bits (747), Expect = 8e-77,   Method: Compositional matrix adjust.
 Identities = 161/423 (38%), Positives = 241/423 (56%), Gaps = 21/423 (4%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +DF   L +RG +HQ ++   L    ++  V  YIG+D TA SLH GHL  +++L   Q+
Sbjct: 3   TDFFEELKQRGLVHQTTDEAALTKQLNEESVKLYIGFDPTADSLHIGHLLPILMLRRFQQ 62

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH PI+L+GGGT +IGDPSF+D+ R++     + E  + IK   S FI +   +  A++
Sbjct: 63  NGHVPIALVGGGTGMIGDPSFKDQERQLNTLDTVLEWSQSIKSQLSRFIDFDDQENPAII 122

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
            NN  WL  +K ID LR+ G  F++N M+S ESV+ R+  E  +S+ EF Y +LQAYDF+
Sbjct: 123 ANNYEWLGELKLIDFLRDTGKNFTINYMMSKESVKRRI--ETGISYTEFAYQLLQAYDFL 180

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L  N+ C LQ+GGSDQWGNI  GI+L  R +  + F LT PL+T A GTK GKT   A+
Sbjct: 181 NLYDNHGCLLQLGGSDQWGNITSGIELLRREREVQGFGLTMPLITKADGTKFGKTEGNAV 240

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM-AKLQ-GKEINEAKKIIA 303
           WL+ + T+PY F+Q+W N DD D V F K  T L + EI  + A+     E   A+K +A
Sbjct: 241 WLDAKKTTPYEFYQFWINTDDRDAVKFLKYFTFLSLEEIAAIEAEFNAAPESRAAQKALA 300

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLL 353
            E+TT+VHG E  E+A   +   F  +I            + +P+  ++ D+    + ++
Sbjct: 301 KEVTTLVHGAEAYEQALRISASLFSGNIKELNAEEIEQGFKGVPSHQVTADD---SLNIV 357

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN--IKLSFGKKNH 411
            ++  A    S  +AR  +++ AI IN   + +  L  +LQ  D  G   + +  GKK +
Sbjct: 358 EVLTTAKIEPSKRQAREDVQNGAIYINGERVQD--LTYELQASDRIGGKYVVIRRGKKKY 415

Query: 412 IIC 414
            + 
Sbjct: 416 FLL 418


>gi|108807710|ref|YP_651626.1| tyrosyl-tRNA synthetase [Yersinia pestis Antiqua]
 gi|108811988|ref|YP_647755.1| tyrosyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|145598080|ref|YP_001162156.1| tyrosyl-tRNA synthetase [Yersinia pestis Pestoides F]
 gi|149365720|ref|ZP_01887755.1| tyrosyl-tRNA synthetase [Yersinia pestis CA88-4125]
 gi|162419738|ref|YP_001606965.1| tyrosyl-tRNA synthetase [Yersinia pestis Angola]
 gi|165926417|ref|ZP_02222249.1| tyrosyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165938656|ref|ZP_02227212.1| tyrosyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           IP275]
 gi|166010702|ref|ZP_02231600.1| tyrosyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166211045|ref|ZP_02237080.1| tyrosyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|167400938|ref|ZP_02306444.1| tyrosyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167422142|ref|ZP_02313895.1| tyrosyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167424859|ref|ZP_02316612.1| tyrosyl-tRNA synthetase [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|218929460|ref|YP_002347335.1| tyrosyl-tRNA synthetase [Yersinia pestis CO92]
 gi|229837891|ref|ZP_04458050.1| tyrosyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229895051|ref|ZP_04510228.1| tyrosyl-tRNA synthetase [Yersinia pestis Pestoides A]
 gi|229898454|ref|ZP_04513600.1| tyrosyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229902297|ref|ZP_04517417.1| tyrosyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|294503624|ref|YP_003567686.1| tyrosyl-tRNA synthetase [Yersinia pestis Z176003]
 gi|81518040|sp|Q8ZE20|SYY_YERPE RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|122979598|sp|Q1C791|SYY_YERPA RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|122980157|sp|Q1CIM5|SYY_YERPN RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|189029783|sp|A4TIS1|SYY_YERPP RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|254765192|sp|A9QZ95|SYY_YERPG RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|108775636|gb|ABG18155.1| tyrosyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|108779623|gb|ABG13681.1| tyrosyl-tRNA synthetase [Yersinia pestis Antiqua]
 gi|115348071|emb|CAL20997.1| tyrosyl-tRNA synthetase [Yersinia pestis CO92]
 gi|145209776|gb|ABP39183.1| tyrosyl-tRNA synthetase [Yersinia pestis Pestoides F]
 gi|149292133|gb|EDM42207.1| tyrosyl-tRNA synthetase [Yersinia pestis CA88-4125]
 gi|162352553|gb|ABX86501.1| tyrosyl-tRNA synthetase [Yersinia pestis Angola]
 gi|165913530|gb|EDR32151.1| tyrosyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           IP275]
 gi|165921638|gb|EDR38835.1| tyrosyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165990404|gb|EDR42705.1| tyrosyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166208225|gb|EDR52705.1| tyrosyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|166958954|gb|EDR55975.1| tyrosyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167049791|gb|EDR61199.1| tyrosyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167056046|gb|EDR65824.1| tyrosyl-tRNA synthetase [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|229680632|gb|EEO76728.1| tyrosyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|229688498|gb|EEO80568.1| tyrosyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229694257|gb|EEO84304.1| tyrosyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229701939|gb|EEO89961.1| tyrosyl-tRNA synthetase [Yersinia pestis Pestoides A]
 gi|262361667|gb|ACY58388.1| tyrosyl-tRNA synthetase [Yersinia pestis D106004]
 gi|262365593|gb|ACY62150.1| tyrosyl-tRNA synthetase [Yersinia pestis D182038]
 gi|294354083|gb|ADE64424.1| tyrosyl-tRNA synthetase [Yersinia pestis Z176003]
 gi|320015023|gb|ADV98594.1| tyrosyl-tRNA synthetase [Yersinia pestis biovar Medievalis str.
           Harbin 35]
          Length = 424

 Score =  292 bits (747), Expect = 8e-77,   Method: Compositional matrix adjust.
 Identities = 157/390 (40%), Positives = 222/390 (56%), Gaps = 21/390 (5%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG ++ Y G+D TA SLH GHL  L+ L   Q 
Sbjct: 4   SNLIKQLQERGLVAQVTDEDALAERLAQGPISLYCGFDPTADSLHLGHLVPLLCLKRFQL 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+P++L+GG T +IGDPSF+   R++     + E +EKI+   S F+ +  G+  A+ 
Sbjct: 64  AGHRPVALVGGATGMIGDPSFKASERKLNTEDTVNEWVEKIRHQVSPFLDFDCGENSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQS-LSFLEFNYMILQAYDF 184
            NN  W   +  +  LR+IG  FSVN+M++ E+V+ RL R+ S +SF EF+Y +LQAYDF
Sbjct: 124 ANNYDWFGGMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDSGISFTEFSYNLLQAYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L KN+   LQ+GGSDQWGNI  GIDL  RL   +++ LT PL+T A GTK GKT  GA
Sbjct: 184 ACLNKNHGVALQIGGSDQWGNITSGIDLTRRLHQQQVYGLTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+ +    K  GK    A+ +
Sbjct: 244 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSLEEINALEEEDKNSGK-APRAQYV 302

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS-----------QHMPTISISKDEVSRGM 350
           +A  +T MVHG E    A       F   +H              MPT+     E++R  
Sbjct: 303 LAENVTGMVHGPEGLAAAKRITDSLFSGDLHDMTEADFAQLAQDGMPTV-----ELNRDA 357

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKIN 380
            L   +V A    S  +AR  + SNA+ IN
Sbjct: 358 DLQQALVNAELVPSRGQARTMIGSNAVAIN 387


>gi|271967347|ref|YP_003341543.1| tyrosine--tRNA ligase [Streptosporangium roseum DSM 43021]
 gi|270510522|gb|ACZ88800.1| Tyrosine--tRNA ligase [Streptosporangium roseum DSM 43021]
          Length = 422

 Score =  292 bits (747), Expect = 8e-77,   Method: Compositional matrix adjust.
 Identities = 160/414 (38%), Positives = 230/414 (55%), Gaps = 10/414 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +D L  L  R  I Q ++   L    ++G +T Y G+D TA SLHAG+L  L++L   Q+
Sbjct: 2   TDILDELEWRDVIAQTTDADALRTALAEGPITVYGGFDPTAPSLHAGNLATLLILTRFQR 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+PI L+GG T +IGDPS R   R +  S+ + E + +I+     F+ +  G T A +
Sbjct: 62  AGHRPIGLVGGATGLIGDPSGRSTERSLNSSEVVAEWVARIRVQVERFLSFDDGPTGATL 121

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           ++N  W   +  ID LR++G  F VNRML+ ESV +RL  +  LS+ EF+Y ILQA D++
Sbjct: 122 VSNLDWTSEMSAIDFLRDVGKHFPVNRMLARESVSARLGGD-GLSYTEFSYQILQANDYL 180

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           EL + + C LQ+GGSDQWGNI  G+DL  R++     ALT  L+T A GTK GKT  GAI
Sbjct: 181 ELYRRHGCTLQLGGSDQWGNITAGVDLIRRVEGAHTHALTGKLITKADGTKFGKTAGGAI 240

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE--INEAKKIIA 303
           WL+  +TSPY F+QYW N DD DVV F K  T     EI  + K         EA++ +A
Sbjct: 241 WLDPALTSPYAFYQYWLNADDRDVVRFLKVFTFRTQDEIAELEKAVADRPAAREAQRTLA 300

Query: 304 TEITTMVHGREEAEKAATAAMECFDM-SIHSQHMPTISISKDEVSR------GMGLLTLI 356
            ++TT+VHG +E  +   A+   F   S+      T+  +  EV R      G   + L+
Sbjct: 301 EDVTTLVHGADELARVVAASRALFGQGSLEELDARTLGSALAEVPRAEVPALGASFVDLL 360

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            ++G   S + ARR +K     +NN  I++E       D      + L  GK++
Sbjct: 361 AESGLVESKSAARRAVKEGGAYLNNVKITDEAYVPSADDLLHGRFLVLRRGKRS 414


>gi|225550104|ref|ZP_03771064.1| tyrosyl-tRNA synthetase [Borrelia burgdorferi 118a]
 gi|225369216|gb|EEG98669.1| tyrosyl-tRNA synthetase [Borrelia burgdorferi 118a]
          Length = 405

 Score =  291 bits (746), Expect = 9e-77,   Method: Compositional matrix adjust.
 Identities = 157/404 (38%), Positives = 239/404 (59%), Gaps = 7/404 (1%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           LS+L +RGF+ Q ++ + L  L  +  +  Y G D T+SSLH GHL   + +  L++ GH
Sbjct: 5   LSLLHKRGFLKQCTSLKVLSDLMDREKIVFYAGVDATSSSLHIGHLIPFLAMMHLRQHGH 64

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
            PI L+G  T+ IGDPS + E R+++ S+EI  N   IK       K+    T    ++N
Sbjct: 65  MPIVLIGDSTAKIGDPSGKSEMRKILSSEEIGNNALLIKNQLQRITKF----TSECFIHN 120

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL ++ YI+ LR++G  FSVNRMLSFE+ + RL  +  LSF+EFNY +LQ+YD+  L 
Sbjct: 121 SNWLDNLNYIEFLRDVGMHFSVNRMLSFETYKRRL--DFGLSFIEFNYQLLQSYDYYMLN 178

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
           K  +CRLQ+GG DQWGNII G+DL  +    + F LT PL+T + G KMGK+  GA++L+
Sbjct: 179 KIKNCRLQIGGDDQWGNIISGVDLIRKKNGSETFGLTFPLITRSDGKKMGKSEKGAVYLD 238

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITT 308
             + S Y+F+QY+RN  D+DV +F    T L   EI+ ++  +G  +N+AK+I+A EIT 
Sbjct: 239 SNLFSIYDFYQYFRNTSDSDVKTFLYLFTFLEEDEIELISNFKGNSLNKAKEILAFEITK 298

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
           +VHG  EA K   A+   F  S    ++P    S       + L+ L++ +    S +E 
Sbjct: 299 IVHGEAEALKVQEASFAAFRGSGDRSNIPFFKFSFSSPKEEILLVDLMLDSKIVPSKSEG 358

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           RR + S  + IN   + ++   +  +DF++   ++L  GKKN +
Sbjct: 359 RRLIDSGGVYINGKRVESQSHLLTKKDFNNN-EVELRVGKKNFL 401


>gi|332161675|ref|YP_004298252.1| tyrosyl-tRNA synthetase [Yersinia enterocolitica subsp. palearctica
           105.5R(r)]
 gi|325665905|gb|ADZ42549.1| tyrosyl-tRNA synthetase [Yersinia enterocolitica subsp. palearctica
           105.5R(r)]
          Length = 424

 Score =  291 bits (746), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 159/390 (40%), Positives = 227/390 (58%), Gaps = 21/390 (5%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG ++ Y G+D TA SLH GHL  L+ L   Q 
Sbjct: 4   SNLIKQLQERGLVAQVTDEDALAERLAQGPISLYCGFDPTADSLHLGHLVPLLCLKRFQL 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+P++L+GG T +IGDPSF+   R++     + E +EKI+   S F+ +  G+  A+ 
Sbjct: 64  AGHRPVALVGGATGMIGDPSFKASERKLNTEDTVNEWVEKIRRQVSPFLDFDCGENSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQS-LSFLEFNYMILQAYDF 184
            NN  W   +  +  LR+IG  FSVN+M++ E+V+ RL R+ S +SF EF+Y +LQAYDF
Sbjct: 124 ANNYDWFGGMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDSGISFTEFSYNLLQAYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K +   LQ+GGSDQWGNI  GIDL  RL   +++ LT PL+T A GTK GKT  GA
Sbjct: 184 ACLNKAHGVALQIGGSDQWGNITSGIDLTRRLHQQQVYGLTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+ +    K  GK    A+ +
Sbjct: 244 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSLEEINALEEEDKNSGK-APRAQYV 302

Query: 302 IATEITTMVHGRE--EAEKAATAAMECFDMS---------IHSQHMPTISISKDEVSRGM 350
           +A  +T MVHG E   A K  TA++   D++         +    MPTI     E++R  
Sbjct: 303 LAENVTGMVHGEEGLAAAKRITASLFSGDLNDMTEADFAQLAQDGMPTI-----ELTRDA 357

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKIN 380
            L   +V A    S  +AR  + SNA+ IN
Sbjct: 358 DLQQALVNAELVPSRGQARTMISSNAVAIN 387


>gi|22125858|ref|NP_669281.1| tyrosyl-tRNA synthetase [Yersinia pestis KIM 10]
 gi|45441947|ref|NP_993486.1| tyrosyl-tRNA synthetase [Yersinia pestis biovar Microtus str.
           91001]
 gi|21958790|gb|AAM85532.1|AE013799_7 tyrosine tRNA synthetase [Yersinia pestis KIM 10]
 gi|45436810|gb|AAS62363.1| tyrosine tRNA synthetase [Yersinia pestis biovar Microtus str.
           91001]
          Length = 428

 Score =  291 bits (746), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 157/390 (40%), Positives = 222/390 (56%), Gaps = 21/390 (5%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG ++ Y G+D TA SLH GHL  L+ L   Q 
Sbjct: 8   SNLIKQLQERGLVAQVTDEDALAERLAQGPISLYCGFDPTADSLHLGHLVPLLCLKRFQL 67

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+P++L+GG T +IGDPSF+   R++     + E +EKI+   S F+ +  G+  A+ 
Sbjct: 68  AGHRPVALVGGATGMIGDPSFKASERKLNTEDTVNEWVEKIRHQVSPFLDFDCGENSAIA 127

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQS-LSFLEFNYMILQAYDF 184
            NN  W   +  +  LR+IG  FSVN+M++ E+V+ RL R+ S +SF EF+Y +LQAYDF
Sbjct: 128 ANNYDWFGGMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDSGISFTEFSYNLLQAYDF 187

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L KN+   LQ+GGSDQWGNI  GIDL  RL   +++ LT PL+T A GTK GKT  GA
Sbjct: 188 ACLNKNHGVALQIGGSDQWGNITSGIDLTRRLHQQQVYGLTVPLITKADGTKFGKTEGGA 247

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+ +    K  GK    A+ +
Sbjct: 248 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSLEEINALEEEDKNSGK-APRAQYV 306

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS-----------QHMPTISISKDEVSRGM 350
           +A  +T MVHG E    A       F   +H              MPT+     E++R  
Sbjct: 307 LAENVTGMVHGPEGLAAAKRITDSLFSGDLHDMTEADFAQLAQDGMPTV-----ELNRDA 361

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKIN 380
            L   +V A    S  +AR  + SNA+ IN
Sbjct: 362 DLQQALVNAELVPSRGQARTMIGSNAVAIN 391


>gi|261378444|ref|ZP_05983017.1| tyrosine--tRNA ligase [Neisseria cinerea ATCC 14685]
 gi|269145228|gb|EEZ71646.1| tyrosine--tRNA ligase [Neisseria cinerea ATCC 14685]
          Length = 432

 Score =  291 bits (746), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 158/379 (41%), Positives = 225/379 (59%), Gaps = 12/379 (3%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I Q ++   LD L ++  +  Y G+D TA SLH GHL  ++ L   Q+ GH PI
Sbjct: 8   LKSRGLIAQTTDIEALDALLNEQKIALYCGFDPTADSLHIGHLLPVLALRRFQQAGHTPI 67

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+   R +  ++ +   +E I+   + F+ +  G+  A+M NN  W
Sbjct: 68  ALVGGATGMIGDPSFKAVERSLNSAETVAGWVESIRNQLTPFLSF-EGENAAIMANNADW 126

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYDFVELAKN 190
             S+  +D LR+IG  FSVN ML+ ESV+ R++R+   +SF EF Y +LQ YDF EL K 
Sbjct: 127 FGSMNCLDFLRDIGKHFSVNAMLNKESVKQRIERDDVGISFTEFAYSLLQGYDFAELNKR 186

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKE 250
           +   L++GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  GA+WLN +
Sbjct: 187 HGAVLEIGGSDQWGNITAGIDLTRRLHQKQVFGLTLPLVTKSDGTKFGKTEGGAVWLNAK 246

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM-AKLQGKEIN-EAKKIIATEITT 308
            TSPY F+Q+W  + DADV  F K  T L + EID + AK Q      EA++I+A E+T 
Sbjct: 247 KTSPYQFYQFWLKVADADVYKFLKYFTFLSIEEIDAIEAKDQASGTKPEAQRILAEEMTR 306

Query: 309 MVHGREEAEKAATAAMECFDMSIHS-------QHMPTISISKDEVSRGMGLLTLIVKAGF 361
           ++HG E A +AA    E       S       + +    +   EVS G+ ++ ++VK G 
Sbjct: 307 LIHG-EAALQAAQRISESLFAEDQSNLTESDFEQLALDGLPAFEVSDGINVVEVLVKTGL 365

Query: 362 ATSTNEARRHLKSNAIKIN 380
           A+S  EAR  + S A+ +N
Sbjct: 366 ASSNKEARGFVNSKAVLLN 384


>gi|228478125|ref|ZP_04062736.1| tyrosyl-tRNA synthetase [Streptococcus salivarius SK126]
 gi|228250305|gb|EEK09558.1| tyrosyl-tRNA synthetase [Streptococcus salivarius SK126]
          Length = 418

 Score =  291 bits (746), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 156/417 (37%), Positives = 231/417 (55%), Gaps = 21/417 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  GHKP 
Sbjct: 7   LKARGLIFQTTDEEALVKAFEEGPVSYYTGYDPTADSLHLGHLVAILTSRRLQLAGHKPY 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+D  R +   + ++  +EKI+G  S F+ +  G   A+M+NN  W
Sbjct: 67  ALVGGATGLIGDPSFKDAERSLQTKETVEGWVEKIQGQLSRFLDFENGDNKAVMVNNYDW 126

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
             S+ +ID LR++G +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF EL   Y
Sbjct: 127 FGSVSFIDFLRDVGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFYELNDKY 184

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
              LQ+GGSDQWGN+  G +L  R        +T PL+T ++G K GK+   A+WL+   
Sbjct: 185 GVTLQIGGSDQWGNMTAGTELLRRKADKSGHVITVPLITDSTGKKFGKSEGNAVWLDATK 244

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIATEITTM 309
           T+PY  +Q+W N+ D D V F K  T L + EI+ + K   Q +    A+K++A E+ T+
Sbjct: 245 TTPYEMYQFWLNVMDDDAVRFLKIFTFLSLEEIEEIGKEFDQARHQRLAQKVLAREVVTL 304

Query: 310 VHGREEAEKAATAAMECF----------DMSIHSQHMPTISISKDEVSRGMGLLTLIVKA 359
           VHG+E  E+A     + F          D+ +    +PT  IS DE    + ++ L+V A
Sbjct: 305 VHGKEAYEQAVHITEQLFAGNLKALSARDLKVALNGVPTYEISADE---NLNIVELLVNA 361

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN--IKLSFGKKNHIIC 414
             + S  +AR  +++ AI IN   + +  L   L D D   N    +  GKK + + 
Sbjct: 362 KISPSKRQAREDVQNGAIYINGERVQD--LDYTLSDADKIDNEITVIRRGKKKNFVL 416


>gi|219684522|ref|ZP_03539465.1| tyrosyl-tRNA synthetase [Borrelia garinii PBr]
 gi|219671884|gb|EED28938.1| tyrosyl-tRNA synthetase [Borrelia garinii PBr]
          Length = 405

 Score =  291 bits (746), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 156/401 (38%), Positives = 238/401 (59%), Gaps = 7/401 (1%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L++L +RGF+ Q ++   L  L  +  +  Y G D T+SSLH GHL   + +  L++ GH
Sbjct: 5   LNLLYKRGFLKQCTSLEVLSDLMDREKIVFYAGVDATSSSLHIGHLIPFLAMMHLRQHGH 64

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
            PI L+G  T+ IGDPS + E R+++ S+EI  N   IK       ++ +    +  ++N
Sbjct: 65  MPIILIGDSTAKIGDPSGKSEMRKILSSEEINNNALSIKNQLQRITRFSS----SCFIHN 120

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL ++ YI+ LR+IG  FSVNRMLSFE+ + RL  +  LSF+EFNY +LQ+YD+  L 
Sbjct: 121 SNWLDNLNYIEFLRDIGIHFSVNRMLSFETYKRRL--DFGLSFIEFNYQLLQSYDYYMLN 178

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
           K  +CRLQ+GG DQWGNI+ G+DL  R    + F +T PL+T + G KMGK+  GA++L+
Sbjct: 179 KIKNCRLQIGGDDQWGNIVSGVDLIRRKMGVEAFGVTFPLITRSDGKKMGKSEKGAVYLD 238

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITT 308
             + S Y+F+QY+RN  D+DV +F    T L   EI+ ++  +G  +N+AK+I+A EIT 
Sbjct: 239 SSLYSIYDFYQYFRNTSDSDVKTFLYLFTFLEEDEIESISNFKGNSLNKAKEILAFEITK 298

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
           +VHG  EA K   A+   F  S    ++P    S   +   + L+ L++ +    S +E 
Sbjct: 299 IVHGEAEALKVQEASFAAFRGSGDRSNIPFFKFSFSGLEEEILLINLMLDSKIVPSKSEG 358

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
           RR + S  + IN   + N+   I  +DF++   I+L  GKK
Sbjct: 359 RRLINSGGVYINGKRVENQNHCITREDFNNN-EIELRVGKK 398


>gi|312862486|ref|ZP_07722729.1| tyrosine--tRNA ligase [Streptococcus vestibularis F0396]
 gi|311102129|gb|EFQ60329.1| tyrosine--tRNA ligase [Streptococcus vestibularis F0396]
          Length = 418

 Score =  291 bits (745), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 156/417 (37%), Positives = 231/417 (55%), Gaps = 21/417 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  GHKP 
Sbjct: 7   LKARGLIFQTTDEEALVKAFEEGPVSYYTGYDPTADSLHLGHLVAILTSRRLQLAGHKPY 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+D  R +   + ++  +EKI+G  S F+ +  G   A+M+NN  W
Sbjct: 67  ALVGGATGLIGDPSFKDAERSLQTKETVEGWVEKIQGQLSRFLDFENGDNKAVMVNNYDW 126

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
             S+ +ID LR++G +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF EL   Y
Sbjct: 127 FGSVSFIDFLRDVGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFYELNDKY 184

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
              LQ+GGSDQWGN+  G +L  R        +T PL+T ++G K GK+   A+WL+   
Sbjct: 185 GVTLQIGGSDQWGNMTAGTELLRRKADKSGHVITVPLITDSTGKKFGKSEGNAVWLDATK 244

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIATEITTM 309
           T+PY  +Q+W N+ D D V F K  T L + EI+ + K   Q +    A+K++A E+ T+
Sbjct: 245 TTPYEMYQFWLNVMDDDAVRFLKIFTFLSLEEIEEIGKEFDQARHQRLAQKVLAREVVTL 304

Query: 310 VHGREEAEKAATAAMECF----------DMSIHSQHMPTISISKDEVSRGMGLLTLIVKA 359
           VHG+E  E+A     + F          D+ +    +PT  IS DE    + ++ L+V A
Sbjct: 305 VHGKEAYEQAVHITEQLFAGNLKALSARDLKVALNGVPTYEISADE---NLNIVELLVNA 361

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN--IKLSFGKKNHIIC 414
             + S  +AR  +++ AI IN   + +  L   L D D   N    +  GKK + + 
Sbjct: 362 KISPSKRQAREDVQNGAIYINGERVQD--LDYTLSDTDKIDNEITVIRRGKKKNFVL 416


>gi|294668559|ref|ZP_06733656.1| tyrosine--tRNA ligase [Neisseria elongata subsp. glycolytica ATCC
           29315]
 gi|291309522|gb|EFE50765.1| tyrosine--tRNA ligase [Neisseria elongata subsp. glycolytica ATCC
           29315]
          Length = 432

 Score =  291 bits (745), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 158/379 (41%), Positives = 223/379 (58%), Gaps = 12/379 (3%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I Q ++   LD L ++  +  Y G+D TA SLH GHL  ++ L   Q+ GH PI
Sbjct: 8   LQSRGLIAQTTDIEALDALLNEQKIALYCGFDPTADSLHIGHLLPVLALRRFQQAGHTPI 67

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+   R +  ++ +   +E I+     F+ +  G+  A+M NN  W
Sbjct: 68  ALVGGATGMIGDPSFKAVERSLNSAETVAGWVESIRNQLKPFLSF-EGENAAIMANNADW 126

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYDFVELAKN 190
             S+  +D LR+IG  FSVN ML+ ESV+ R++R+   +SF EF Y +LQ YDF EL K 
Sbjct: 127 FGSMNCLDFLRDIGKHFSVNAMLNKESVKQRIERDDVGISFTEFAYSLLQGYDFAELNKR 186

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKE 250
           +   L++GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  GA+WLN +
Sbjct: 187 HGAVLEIGGSDQWGNITAGIDLTRRLNQKQVFGLTLPLVTKSDGTKFGKTEGGAVWLNAK 246

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM-AKLQGKEIN-EAKKIIATEITT 308
            TSPY F+Q+W  + DADV  F K  T L + EID + AK Q      EA++I+A E+T 
Sbjct: 247 KTSPYQFYQFWLKVADADVYKFLKYFTFLSIEEIDAIEAKDQASGTKPEAQRILAEEMTR 306

Query: 309 MVHGREEAEKAATAAMECFDMSIHS-------QHMPTISISKDEVSRGMGLLTLIVKAGF 361
           ++HG E A +AA    E       S       + +    +   EVS G+ ++  +VK G 
Sbjct: 307 LIHG-EAALQAAQRISESLFAEDQSSLTEGDFEQLALDGLPAFEVSDGLNVVEALVKTGL 365

Query: 362 ATSTNEARRHLKSNAIKIN 380
           A+S  EAR  + S A+ +N
Sbjct: 366 ASSNKEARGFVNSKAVLLN 384


>gi|322515916|ref|ZP_08068857.1| tyrosine--tRNA ligase [Streptococcus vestibularis ATCC 49124]
 gi|322125590|gb|EFX96920.1| tyrosine--tRNA ligase [Streptococcus vestibularis ATCC 49124]
          Length = 438

 Score =  291 bits (745), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 156/417 (37%), Positives = 231/417 (55%), Gaps = 21/417 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  GHKP 
Sbjct: 27  LKARGLIFQTTDEEALVKAFEEGPVSYYTGYDPTADSLHLGHLVAILTSRRLQLAGHKPY 86

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+D  R +   + ++  +EKI+G  S F+ +  G   A+M+NN  W
Sbjct: 87  ALVGGATGLIGDPSFKDAERSLQTKETVEGWVEKIQGQLSRFLDFENGDNKAVMVNNYDW 146

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
             S+ +ID LR++G +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF EL   Y
Sbjct: 147 FGSVSFIDFLRDVGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFYELNDKY 204

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
              LQ+GGSDQWGN+  G +L  R        +T PL+T ++G K GK+   A+WL+   
Sbjct: 205 GVTLQIGGSDQWGNMTAGTELLRRKADKSGHVITVPLITDSTGKKFGKSEGNAVWLDSTK 264

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIATEITTM 309
           T+PY  +Q+W N+ D D V F K  T L + EI+ + K   Q +    A+K++A E+ T+
Sbjct: 265 TTPYEMYQFWLNVMDDDAVRFLKIFTFLSLEEIEEIGKEFDQARHQRLAQKVLAREVVTL 324

Query: 310 VHGREEAEKAATAAMECF----------DMSIHSQHMPTISISKDEVSRGMGLLTLIVKA 359
           VHG+E  E+A     + F          D+ +    +PT  IS DE    + ++ L+V A
Sbjct: 325 VHGKEAYEQAVHITEQLFAGNLKALSARDLKVALNGVPTYEISADE---NLNIVELLVNA 381

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN--IKLSFGKKNHIIC 414
             + S  +AR  +++ AI IN   + +  L   L D D   N    +  GKK + + 
Sbjct: 382 KISPSKRQAREDVQNGAIYINGERVQD--LDYTLSDTDKIDNEITVIRRGKKKNFVL 436


>gi|325197662|gb|ADY93118.1| tyrosyl-tRNA synthetase [Neisseria meningitidis G2136]
          Length = 431

 Score =  291 bits (745), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 158/380 (41%), Positives = 223/380 (58%), Gaps = 14/380 (3%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I Q ++   LD L ++  +  Y G+D TA SLH GHL  ++ L   Q+ GH PI
Sbjct: 7   LQSRGLIAQTTDIEALDALLNEQKIALYCGFDPTADSLHIGHLLPVLALRRFQQAGHTPI 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+   R +  ++ +   +E I+   + F+ +  G   A+M NN  W
Sbjct: 67  ALVGGATGMIGDPSFKAAERSLNSAETVAGWVESIRNQLTPFLSFEGGNA-AIMANNADW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQS-LSFLEFNYMILQAYDFVELAKN 190
             S+  +D LR+IG  FSVN ML+ ESV+ R+ R+ + +SF EF Y +LQ YDF EL K 
Sbjct: 126 FGSMNCLDFLRDIGKHFSVNAMLNKESVKQRIDRDGAGISFTEFAYSLLQGYDFAELNKR 185

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKE 250
           +   L++GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  GA+WLN +
Sbjct: 186 HGAVLEIGGSDQWGNITAGIDLTRRLNQKQVFGLTLPLVTKSDGTKFGKTEGGAVWLNAK 245

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKIIATEIT 307
            TSPY F+Q+W  + DADV  F K  T L + EID +    K  G +  EA++I+A E+T
Sbjct: 246 KTSPYQFYQFWLKVADADVYKFLKYFTFLSIEEIDAIEAKDKASGSK-PEAQRILAEEMT 304

Query: 308 TMVHGREEAEKAATAAMECFDMSIHS-------QHMPTISISKDEVSRGMGLLTLIVKAG 360
            ++HG EEA  AA    E       S       + +    +   EVS G+ ++  +VK G
Sbjct: 305 RLIHG-EEALAAAQRISESLFAEDQSSLTESDFEQLALDGLPAFEVSDGINVVEALVKTG 363

Query: 361 FATSTNEARRHLKSNAIKIN 380
            A+S  EAR  + S A+ +N
Sbjct: 364 LASSNKEARGFVNSKAVLLN 383


>gi|285808403|gb|ADC35930.1| putative tyrosyl-tRNA synthetase [uncultured bacterium 70]
          Length = 414

 Score =  291 bits (745), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 154/402 (38%), Positives = 238/402 (59%), Gaps = 17/402 (4%)

Query: 28  DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFR 87
           ++L +Q + T YIG+D TASSLH G L  +M L  LQ+ GH PI+++GGGT +IGDPS +
Sbjct: 11  ELLATQSL-TGYIGFDPTASSLHVGSLLTVMGLARLQRCGHTPIAIVGGGTGMIGDPSGK 69

Query: 88  DESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSF 147
            + R ++ S+ + +N+  ++     F+ +  G   A ++NN  WL +I  +  LR+ G  
Sbjct: 70  SQERVLLSSELLDQNVAGVRAQLERFLDFSAGSHQARLVNNAEWLGAIDLLSFLRDAGKH 129

Query: 148 FSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNII 207
           F+VN ML  ESV  RL+ E  +SF EF+Y++LQAYD+++L   Y C +QMGGSDQWGNI 
Sbjct: 130 FTVNYMLQKESVSRRLESEDGISFTEFSYLVLQAYDYLQLFDRYGCTVQMGGSDQWGNIT 189

Query: 208 CGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDA 267
            GIDL  +L+  K   L  PL+ TA+GTK GKT +G +WL+   TSP+ F+Q+W N DD+
Sbjct: 190 AGIDLIRKLRAKKAHGLVWPLMKTAAGTKFGKTEAGTVWLDAARTSPFKFYQFWVNTDDS 249

Query: 268 DVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIATEITTMVHGREEAEKAATAAME 325
           DV+++ K  T L    I+ +  +     E  EA++++A E+TT+VHG E   +A  A+  
Sbjct: 250 DVIAYLKFFTFLDRPAIEALEGVTRTAPEKREAQRVLAREVTTLVHGAEHVTRAEHASSV 309

Query: 326 CFDMSIHS----QHMPTIS-ISKDEVS------RGMGLLTLIVKAG--FATSTNEARRHL 372
            F   I +    Q +   S +   EVS       GM L+ L+       A S +EARR +
Sbjct: 310 LFGEDIATLSADQVLAVFSDVPSSEVSGAAFEGAGMLLVELLADPAVKLAPSKSEARRLV 369

Query: 373 KSNAIKINNSIISNEKLQI-KLQDFDSTGNIKLSFGKKNHII 413
           +S  + +NN   S+ ++++ + Q  +    +     K+NH++
Sbjct: 370 QSGGVYVNNRRASDVQMRLTREQAIEGVLFVVRKGQKQNHVV 411


>gi|318605833|emb|CBY27331.1| tyrosyl-tRNA synthetase; cluster 1 [Yersinia enterocolitica subsp.
           palearctica Y11]
          Length = 424

 Score =  291 bits (745), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 159/390 (40%), Positives = 227/390 (58%), Gaps = 21/390 (5%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG ++ Y G+D TA SLH GHL  L+ L   Q 
Sbjct: 4   SNLIKQLQERGLVAQVTDEDALAERLAQGPISLYCGFDPTADSLHLGHLVPLLCLKRFQL 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+P++L+GG T +IGDPSF+   R++     + E +EKI+   S F+ +  G+  A+ 
Sbjct: 64  AGHRPVALVGGATGMIGDPSFKASERKLNTEDMVNEWVEKIRRQVSPFLDFDCGENSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQS-LSFLEFNYMILQAYDF 184
            NN  W   +  +  LR+IG  FSVN+M++ E+V+ RL R+ S +SF EF+Y +LQAYDF
Sbjct: 124 ANNYDWFGGMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDSGISFTEFSYNLLQAYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K +   LQ+GGSDQWGNI  GIDL  RL   +++ LT PL+T A GTK GKT  GA
Sbjct: 184 ACLNKAHGVALQIGGSDQWGNITSGIDLTRRLHQQQVYGLTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+ +    K  GK    A+ +
Sbjct: 244 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSLEEINALEEEDKNSGK-APRAQYV 302

Query: 302 IATEITTMVHGRE--EAEKAATAAMECFDMS---------IHSQHMPTISISKDEVSRGM 350
           +A  +T MVHG E   A K  TA++   D++         +    MPTI     E++R  
Sbjct: 303 LAENVTGMVHGEEGLAAAKRITASLFSGDLNDMTEADFAQLAQDGMPTI-----ELTRDA 357

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKIN 380
            L   +V A    S  +AR  + SNA+ IN
Sbjct: 358 DLQQALVNAELVPSRGQARTMISSNAVAIN 387


>gi|123442400|ref|YP_001006379.1| tyrosyl-tRNA synthetase [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|189029781|sp|A1JNV3|SYY_YERE8 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|122089361|emb|CAL12209.1| tyrosyl-tRNA synthetase [Yersinia enterocolitica subsp.
           enterocolitica 8081]
          Length = 424

 Score =  291 bits (745), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 159/390 (40%), Positives = 226/390 (57%), Gaps = 21/390 (5%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG ++ Y G+D TA SLH GHL  L+ L   Q 
Sbjct: 4   SNLIKQLQERGLVAQVTDEDALAERLAQGPISLYCGFDPTADSLHLGHLVPLLCLKRFQL 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+P++L+GG T +IGDPSF+   R++     + E +EKI+   S F+ +  G   A+ 
Sbjct: 64  AGHRPVALVGGATGMIGDPSFKASERKLNTEDTVNEWVEKIRRQVSPFLDFDCGDNSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQS-LSFLEFNYMILQAYDF 184
            NN  W   +  +  LR+IG  FSVN+M++ E+V+ RL R+ S +SF EF+Y +LQAYDF
Sbjct: 124 ANNYDWFGGMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDSGISFTEFSYNLLQAYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K +   LQ+GGSDQWGNI  GIDL  RL   +++ LT PL+T A GTK GKT  GA
Sbjct: 184 ACLNKAHGVALQIGGSDQWGNITSGIDLTRRLHQQQVYGLTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+ +    K  GK    A+ +
Sbjct: 244 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMNLEEINALEEEDKNSGK-APRAQYV 302

Query: 302 IATEITTMVHGRE--EAEKAATAAMECFDMS---------IHSQHMPTISISKDEVSRGM 350
           +A  +T MVHG E   A K  TA++   D++         +    MPTI     E++R  
Sbjct: 303 LAENVTGMVHGEEGLAAAKRITASLFSGDLNDMTEADFAQLAQDGMPTI-----ELTRDA 357

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKIN 380
            L   +V A    S  +AR  + SNA+ IN
Sbjct: 358 DLQQALVNAELVPSRGQARTMISSNAVAIN 387


>gi|55821842|ref|YP_140284.1| tyrosyl-tRNA synthetase [Streptococcus thermophilus LMG 18311]
 gi|55823758|ref|YP_142199.1| tyrosyl-tRNA synthetase [Streptococcus thermophilus CNRZ1066]
 gi|55737827|gb|AAV61469.1| tyrosyl-tRNA synthetase [Streptococcus thermophilus LMG 18311]
 gi|55739743|gb|AAV63384.1| tyrosyl-tRNA synthetase [Streptococcus thermophilus CNRZ1066]
          Length = 438

 Score =  291 bits (744), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 156/417 (37%), Positives = 231/417 (55%), Gaps = 21/417 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  GHKP 
Sbjct: 27  LKARGLIFQTTDEEALVKAFEEGPVSFYTGYDPTADSLHLGHLVAILTSRRLQLAGHKPY 86

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+D  R +   + ++  +EKI+G  S F+ +  G   A+M+NN  W
Sbjct: 87  ALVGGATGLIGDPSFKDAERSLQTKETVEGWVEKIQGQLSRFLDFENGDNKAVMVNNYDW 146

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
             S+ +ID LR++G +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF EL   Y
Sbjct: 147 FGSVSFIDFLRDVGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFYELNAKY 204

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
              LQ+GGSDQWGN+  G +L  R        +T PL+T ++G K GK+   A+WL+   
Sbjct: 205 GVTLQIGGSDQWGNMTAGTELLRRKADKSGHVITVPLITDSTGKKFGKSEGNAVWLDATK 264

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIATEITTM 309
           T+PY  +Q+W N+ D D V F K  T L + EI+ + K   Q +    A+K++A E+ T+
Sbjct: 265 TTPYEMYQFWLNVMDDDAVRFLKIFTFLSLEEIEEIGKEFDQARHQRLAQKVLAREVVTL 324

Query: 310 VHGREEAEKAATAAMECF----------DMSIHSQHMPTISISKDEVSRGMGLLTLIVKA 359
           VHG+E  E+A     + F          D+ +    +PT  IS DE    + ++ L+V A
Sbjct: 325 VHGKEAYEQAVHITEQLFAGNLKALSARDLKVALNGVPTYEISADE---NLNIVELLVNA 381

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN--IKLSFGKKNHIIC 414
             + S  +AR  +++ AI IN   + +  L   L D D   N    +  GKK + + 
Sbjct: 382 KISPSKRQAREDVQNGAIYINGERVQD--LDYTLSDTDKIDNEITVIRRGKKKNFVL 436


>gi|97197361|sp|Q5LXV1|SYY1_STRT1 RecName: Full=Tyrosyl-tRNA synthetase 1; AltName:
           Full=Tyrosine--tRNA ligase 1; Short=TyrRS 1
 gi|97197368|sp|Q5M2F3|SYY1_STRT2 RecName: Full=Tyrosyl-tRNA synthetase 1; AltName:
           Full=Tyrosine--tRNA ligase 1; Short=TyrRS 1
 gi|312279184|gb|ADQ63841.1| Tyrosyl-tRNA synthetase 1 [Streptococcus thermophilus ND03]
          Length = 418

 Score =  291 bits (744), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 156/417 (37%), Positives = 231/417 (55%), Gaps = 21/417 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  GHKP 
Sbjct: 7   LKARGLIFQTTDEEALVKAFEEGPVSFYTGYDPTADSLHLGHLVAILTSRRLQLAGHKPY 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+D  R +   + ++  +EKI+G  S F+ +  G   A+M+NN  W
Sbjct: 67  ALVGGATGLIGDPSFKDAERSLQTKETVEGWVEKIQGQLSRFLDFENGDNKAVMVNNYDW 126

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
             S+ +ID LR++G +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF EL   Y
Sbjct: 127 FGSVSFIDFLRDVGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFYELNAKY 184

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
              LQ+GGSDQWGN+  G +L  R        +T PL+T ++G K GK+   A+WL+   
Sbjct: 185 GVTLQIGGSDQWGNMTAGTELLRRKADKSGHVITVPLITDSTGKKFGKSEGNAVWLDATK 244

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIATEITTM 309
           T+PY  +Q+W N+ D D V F K  T L + EI+ + K   Q +    A+K++A E+ T+
Sbjct: 245 TTPYEMYQFWLNVMDDDAVRFLKIFTFLSLEEIEEIGKEFDQARHQRLAQKVLAREVVTL 304

Query: 310 VHGREEAEKAATAAMECF----------DMSIHSQHMPTISISKDEVSRGMGLLTLIVKA 359
           VHG+E  E+A     + F          D+ +    +PT  IS DE    + ++ L+V A
Sbjct: 305 VHGKEAYEQAVHITEQLFAGNLKALSARDLKVALNGVPTYEISADE---NLNIVELLVNA 361

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN--IKLSFGKKNHIIC 414
             + S  +AR  +++ AI IN   + +  L   L D D   N    +  GKK + + 
Sbjct: 362 KISPSKRQAREDVQNGAIYINGERVQD--LDYTLSDTDKIDNEITVIRRGKKKNFVL 416


>gi|238782597|ref|ZP_04626628.1| Tyrosyl-tRNA synthetase [Yersinia bercovieri ATCC 43970]
 gi|238716524|gb|EEQ08505.1| Tyrosyl-tRNA synthetase [Yersinia bercovieri ATCC 43970]
          Length = 428

 Score =  291 bits (744), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 159/390 (40%), Positives = 227/390 (58%), Gaps = 21/390 (5%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG ++ Y G+D TA SLH GHL  L+ L   Q 
Sbjct: 8   SNLIKQLQERGLVAQVTDEEALAERLAQGPISLYCGFDPTADSLHLGHLVPLLCLKRFQL 67

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+P++L+GG T +IGDPSF+   R++     + E +EKI+   S F+ +  G+  A+ 
Sbjct: 68  AGHRPVALVGGATGMIGDPSFKASERKLNTEDTVNEWVEKIRRQVSPFLDFDCGENSAIA 127

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQS-LSFLEFNYMILQAYDF 184
            NN  W   +  +  LR+IG  FSVN+M++ E+V+ RL R+ S +SF EF+Y +LQAYDF
Sbjct: 128 ANNYDWFGGMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDSGISFTEFSYNLLQAYDF 187

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K +   LQ+GGSDQWGNI  GIDL  RL   +++ LT PL+T A GTK GKT  GA
Sbjct: 188 ACLNKAHGVALQIGGSDQWGNITSGIDLTRRLHQQQVYGLTVPLITKADGTKFGKTEGGA 247

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+ +    K  GK    A+ +
Sbjct: 248 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSLEEINALEEEDKNSGK-APRAQYV 306

Query: 302 IATEITTMVHGRE--EAEKAATAAMECFDMSIHSQH---------MPTISISKDEVSRGM 350
           +A  +T MVHG E   A K  T ++   D++  +Q          MPTI     E++R  
Sbjct: 307 LAENVTAMVHGAEGLAAAKRITDSLFSGDLNEMTQADFAQLAQDGMPTI-----ELTRDA 361

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKIN 380
            L   +V A    S  +AR  + SNA+ IN
Sbjct: 362 DLQQALVNAELVPSRGQARTMINSNAVAIN 391


>gi|312149218|gb|ADQ29289.1| tyrosyl-tRNA synthetase [Borrelia burgdorferi N40]
          Length = 405

 Score =  291 bits (744), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 156/404 (38%), Positives = 239/404 (59%), Gaps = 7/404 (1%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           LS+L +RGF+ Q ++ + L  L  +  +  Y G D T+SSLH GHL   + +  L++ GH
Sbjct: 5   LSLLHKRGFLKQCTSLKVLSDLMDREKIVFYAGVDATSSSLHIGHLIPFLAMMHLRQHGH 64

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
            PI L+G  T+ IGDPS + E R+++ S+EI  N   IK       K+    T    ++N
Sbjct: 65  MPIVLIGDSTAKIGDPSGKSEMRKILSSEEIGNNALLIKNQLQRITKF----TSECFIHN 120

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL ++ YI+ LR++G  FSVNRMLSFE+ + R+  +  LSF+EFNY +LQ+YD+  L 
Sbjct: 121 SNWLDNLNYIEFLRDVGMHFSVNRMLSFETYKRRM--DFGLSFIEFNYQLLQSYDYYMLN 178

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
           K  +CRLQ+GG DQWGNII G+DL  +    + F LT PL+T + G KMGK+  GA++L+
Sbjct: 179 KIKNCRLQIGGDDQWGNIISGVDLIRKKNGSETFGLTFPLITRSDGKKMGKSEKGAVYLD 238

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITT 308
             + S Y+F+QY+RN  D+DV +F    T L   EI+ ++  +G  +N+AK+I+A EIT 
Sbjct: 239 SNLFSIYDFYQYFRNTSDSDVKTFLYLFTFLEEDEIELISNFKGNSLNKAKEILAFEITK 298

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
           +VHG  EA K   A+   F  S    ++P    S       + L+ L++ +    S +E 
Sbjct: 299 IVHGEAEALKVQEASFAAFRGSGDRSNIPFFKFSFSSPKEEILLVDLMLDSKIVPSKSEG 358

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           RR + S  + IN   + ++   +  +DF++   ++L  GKKN +
Sbjct: 359 RRLIDSGGVYINGKRVESQSHLLTKKDFNNN-EVELRVGKKNFL 401


>gi|197285245|ref|YP_002151117.1| tyrosyl-tRNA synthetase [Proteus mirabilis HI4320]
 gi|227355671|ref|ZP_03840065.1| tyrosyl-tRNA synthetase [Proteus mirabilis ATCC 29906]
 gi|194682732|emb|CAR42933.1| tyrosyl-tRNA synthetase [Proteus mirabilis HI4320]
 gi|227164278|gb|EEI49171.1| tyrosyl-tRNA synthetase [Proteus mirabilis ATCC 29906]
          Length = 428

 Score =  290 bits (743), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 161/422 (38%), Positives = 234/422 (55%), Gaps = 19/422 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + ++ L ERG I Q+++   L     QG +  Y G+D TA SLH GHL  L+ L   Q  
Sbjct: 9   NLITQLQERGLIAQVTDEAALVERLEQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQLA 68

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP++L+GG T +IGDPSF+   R++     + E +EKI+   S F+ +  G+  A + 
Sbjct: 69  GHKPVALVGGATGLIGDPSFKATERKLNTQDTVHEWVEKIRKQVSPFLDFDRGENSAELA 128

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYDFV 185
           NN  W   +  +  LR+IG  FSVN+M++ E+V+ RL R+   +SF EF Y +LQAYDF 
Sbjct: 129 NNYDWFGQMDVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDVGISFTEFAYNLLQAYDFA 188

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L KN    LQ+GGSDQWGNI  GIDL  R    ++F +T PL+T + GTK GKT  GA+
Sbjct: 189 SLNKNLGVELQIGGSDQWGNITSGIDLTRRFNQKQVFGMTVPLITKSDGTKFGKTEGGAV 248

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIA 303
           WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+ + +      +   A++++A
Sbjct: 249 WLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINALEEEDKNSGQAPRAQRVLA 308

Query: 304 TEITTMVHGREEAEKA----------ATAAMECFDMSIHSQH-MPTISISKDEVSRGMGL 352
            ++T +VHG E    A          A A +   D+   +Q  MPTI     E+ +G  L
Sbjct: 309 EQVTRLVHGEEGLTAAKRITDSLFSGAIADLTQADLEQLAQDGMPTI-----ELEKGNDL 363

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
              +V A    S  +AR  + SNA+ IN     N +   + +DF       L  GKK++ 
Sbjct: 364 QQALVNAELVPSRGQARTMIGSNAVSINGEKQDNPEYVFEEKDFLFGHYSILRRGKKHYC 423

Query: 413 IC 414
           + 
Sbjct: 424 LV 425


>gi|15677671|ref|NP_274832.1| tyrosyl-tRNA synthetase [Neisseria meningitidis MC58]
 gi|81784231|sp|Q9JXY5|SYY_NEIMB RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|7227090|gb|AAF42170.1| tyrosyl-tRNA synthetase [Neisseria meningitidis MC58]
 gi|316984445|gb|EFV63418.1| tyrosyl-tRNA synthetase [Neisseria meningitidis H44/76]
 gi|325139655|gb|EGC62194.1| tyrosyl-tRNA synthetase [Neisseria meningitidis CU385]
 gi|325200896|gb|ADY96351.1| tyrosyl-tRNA synthetase [Neisseria meningitidis H44/76]
          Length = 431

 Score =  290 bits (743), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 158/380 (41%), Positives = 223/380 (58%), Gaps = 14/380 (3%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I Q ++   LD L ++  +  Y G+D TA SLH GHL  ++ L   Q+ GH PI
Sbjct: 7   LQSRGLIAQTTDIEALDALLNEQKIALYCGFDPTADSLHIGHLLPVLALRRFQQAGHTPI 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+   R +  ++ +   +E I+   + F+ +  G   A+M NN  W
Sbjct: 67  ALVGGATGMIGDPSFKAAERSLNSAETVAGWVESIRNQLTPFLSFEGGNA-AIMANNADW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQS-LSFLEFNYMILQAYDFVELAKN 190
             S+  +D LR+IG  FSVN ML+ ESV+ R+ R+ + +SF EF Y +LQ YDF EL K 
Sbjct: 126 FGSMNCLDFLRDIGKHFSVNAMLNKESVKQRIDRDGAGISFTEFAYSLLQGYDFAELNKR 185

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKE 250
           +   L++GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  GA+WLN +
Sbjct: 186 HGAVLEIGGSDQWGNITAGIDLTRRLHQKQVFGLTLPLVTKSDGTKFGKTEGGAVWLNAK 245

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKIIATEIT 307
            TSPY F+Q+W  + DADV  F K  T L + EID +    K  G +  EA++I+A E+T
Sbjct: 246 KTSPYQFYQFWLKVADADVYKFLKYFTFLSIEEIDAIEAKDKASGSK-PEAQRILAEEMT 304

Query: 308 TMVHGREEAEKAATAAMECFDMSIHS-------QHMPTISISKDEVSRGMGLLTLIVKAG 360
            ++HG EEA  AA    E       S       + +    +   EVS G+ ++  +VK G
Sbjct: 305 RLIHG-EEALAAAQRISESLFAEDQSSLTESDFEQLALDGLPAFEVSDGINVVEALVKTG 363

Query: 361 FATSTNEARRHLKSNAIKIN 380
            A+S  EAR  + S A+ +N
Sbjct: 364 LASSNKEARGFVNSKAVLLN 383


>gi|253989418|ref|YP_003040774.1| tyrosyl-tRNA synthetase [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|253780868|emb|CAQ84030.1| tyrosyl-tRNA synthetase 1 [Photorhabdus asymbiotica]
          Length = 424

 Score =  290 bits (743), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 160/426 (37%), Positives = 233/426 (54%), Gaps = 21/426 (4%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           ++ +  L ERG I Q+++   L    +QG V+ Y G+D TA SLH GHL  L+ L   Q 
Sbjct: 4   NNLIKQLQERGLIAQVTDENALAERLAQGPVSLYCGFDPTADSLHLGHLVPLLCLKRFQL 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++  +  ++E +EKI+   S F+ +  G   A  
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKATERKLNTADTVKEWVEKIRRQVSPFLDFDCGDNSAKT 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYDF 184
            NN  W   +  +  LR+IG  FSVN+M++ E+V+ RL R+   +SF EF+Y +LQ+YDF
Sbjct: 124 ANNYDWFGGMDVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDVGISFTEFSYNLLQSYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           V L + +   LQ+GGSDQWGNI  GIDL  R+   ++F +T PL+T + GTK GKT  GA
Sbjct: 184 VRLNEEHGVELQIGGSDQWGNITSGIDLTRRINQKQVFGMTVPLITKSDGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKKII 302
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + +I+ +  A     +   A+ ++
Sbjct: 244 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSLEDINALEEADKNSGKAPRAQYVL 303

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHS-----------QHMPTISISKDEVSRGMG 351
           A ++T MVHG E    A       F  ++               MP I     E+ RG  
Sbjct: 304 AEQVTGMVHGEEGLSAAKRITESLFSGTVADLTEADFAQLAQDGMPVI-----ELERGAD 358

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           L   +V AG   S  +AR  + SNA+ IN    S  +      +F       L  GKK+ 
Sbjct: 359 LQQALVNAGLVPSRGQARTMISSNAVAINGEKQSEPEYVFTDSNFLFGRYTLLRRGKKHD 418

Query: 412 IICHLC 417
             C +C
Sbjct: 419 --CLIC 422


>gi|325129576|gb|EGC52400.1| tyrosyl-tRNA synthetase [Neisseria meningitidis OX99.30304]
          Length = 431

 Score =  290 bits (743), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 158/379 (41%), Positives = 223/379 (58%), Gaps = 12/379 (3%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I Q ++   LD L ++  ++ Y G+D TA SLH GHL  ++ L   Q+ GH PI
Sbjct: 7   LQSRGLIAQTTDIEALDALLNEQKISLYCGFDPTADSLHIGHLLPVLALRRFQQAGHTPI 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+   R +  ++ +   +E I+   + F+ +  G   A+M NN  W
Sbjct: 67  ALVGGATGMIGDPSFKAAERSLNSAETVAGWVESIRSQLTPFLSFEGGNA-AIMANNADW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQS-LSFLEFNYMILQAYDFVELAKN 190
              +  +D LR+IG  FSVN ML+ ESV+ R+ R+ + +SF EF Y +LQ YDF EL K 
Sbjct: 126 FGKMNCLDFLRDIGKHFSVNAMLNKESVKQRIDRDGAGISFTEFAYSLLQGYDFAELNKR 185

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKE 250
           +   L++GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  GA+WLN +
Sbjct: 186 HGAVLEIGGSDQWGNITAGIDLTRRLNQKQVFGLTLPLVTKSDGTKFGKTEGGAVWLNAK 245

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM-AKLQGK-EINEAKKIIATEITT 308
            TSPY F+Q+W  + DADV  F K  T L + EID + AK Q      EA++I+A E+T 
Sbjct: 246 KTSPYQFYQFWLKVADADVYKFLKYFTFLSIEEIDAVEAKDQASGSKPEAQRILAEEMTR 305

Query: 309 MVHGREEAEKAATAAMECFDMSIHS-------QHMPTISISKDEVSRGMGLLTLIVKAGF 361
           ++HG EEA  AA    E       S       + +    +   EVS G+ ++  +VK G 
Sbjct: 306 LIHG-EEALAAAQRISESLFAEDQSSLTESDFEQLALDGLPAFEVSDGINVVEALVKTGL 364

Query: 362 ATSTNEARRHLKSNAIKIN 380
           A+S  EAR  + S A+ +N
Sbjct: 365 ASSNKEARGFVNSKAVLLN 383


>gi|111115193|ref|YP_709811.1| tyrosyl-tRNA synthetase [Borrelia afzelii PKo]
 gi|123145731|sp|Q0SNE3|SYY_BORAP RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|110890467|gb|ABH01635.1| tyrosyl-tRNA synthetase [Borrelia afzelii PKo]
          Length = 405

 Score =  290 bits (743), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 157/401 (39%), Positives = 237/401 (59%), Gaps = 7/401 (1%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L++L +RGF+ Q ++ + L  L  +  +  Y G D T+SSLH GHL   + +  L++ GH
Sbjct: 5   LNLLHKRGFLKQCTSLKVLSDLMDREKIVFYAGVDATSSSLHIGHLIPFLAMMHLRQHGH 64

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
            PI L+G  T+ IGDPS + E R+++  +EI  N   IK       K+ +       ++N
Sbjct: 65  IPIVLIGDSTTKIGDPSGKSEMRKILSLEEISNNAFSIKNQLQRITKFSS----KCFIHN 120

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL ++ YI+ LR+IG  FSVNRMLSFE+ + RL  +  LSF+EFNY +LQ+YD+  L 
Sbjct: 121 SNWLDNLNYIEFLRDIGIHFSVNRMLSFETYKKRL--DFGLSFIEFNYQLLQSYDYYMLN 178

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
           K  +CRLQ+GG DQWGNII GIDL  +    + F LT PL+T + G KMGK+  GA++L+
Sbjct: 179 KIRNCRLQIGGDDQWGNIISGIDLIRKKAGVETFGLTFPLITRSDGKKMGKSEKGAVYLD 238

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITT 308
             + S Y+F+QY+RN  D+DV +F    T L   EI+ ++  +G  +N+AK+I+A EIT 
Sbjct: 239 SSLYSIYDFYQYFRNTSDSDVKTFLYLFTFLEEDEIELISNFKGNSLNKAKEILAFEITK 298

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
           +VHG  EA K   A+   F  S    ++P    S   +   + L+ L++ +    S +E 
Sbjct: 299 IVHGEAEALKVQEASFAAFRGSGDRSNIPFFKFSFSNLEEEVLLINLMLDSKIVPSKSEG 358

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
           RR + S  + IN   + N+   +  +DF++   I+L  GKK
Sbjct: 359 RRLIDSGGVYINGKRVENQNHCLTRKDFNNN-EIELRVGKK 398


>gi|325281475|ref|YP_004254017.1| Tyrosyl-tRNA synthetase [Odoribacter splanchnicus DSM 20712]
 gi|324313284|gb|ADY33837.1| Tyrosyl-tRNA synthetase [Odoribacter splanchnicus DSM 20712]
          Length = 430

 Score =  290 bits (743), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 163/428 (38%), Positives = 231/428 (53%), Gaps = 22/428 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG IH I    E   L ++G  TAY+G D TA SLH GHL  +M++   Q  
Sbjct: 2   NFVDELKWRGMIHDIMPGTEE--LLAKGQTTAYVGIDPTADSLHVGHLVSVMMMKHFQMA 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG-TGKTDALM 125
           GHKPI ++GG T +IGDPS + + R ++  + I++N+  IK   S FI +  T    A+M
Sbjct: 60  GHKPIFIIGGATGMIGDPSGKSQERNLLDEETIRKNMAGIKAQLSRFIDFNSTASNAAIM 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQAYD 183
           LNN  W+    ++D +REIG   +VN M++ +SV+ RL  E  Q +SF EF Y ++Q YD
Sbjct: 120 LNNYDWMKQFSFLDFIREIGKHITVNYMMAKDSVKKRLSSESAQGMSFTEFTYQLVQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ L KNY C LQMGGSDQWGNI  G +L  R +    + LT PL+T + G K GKT SG
Sbjct: 180 FLHLRKNYGCMLQMGGSDQWGNITTGGELIRRKEGLDAYGLTWPLMTKSDGKKFGKTESG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKKI 301
            IWL+ E TSPY F+Q+W N  D D   + K  T LP + ID +     +   + + +K 
Sbjct: 240 NIWLDPERTSPYKFYQFWLNTTDEDAARYVKIFTILPPARIDALIAEHREAPHLRKLQKT 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDEVS 347
           +A EIT ++HG E    A  A+   F  +                 + +P   I+  ++ 
Sbjct: 300 LAKEITCLIHGEEAYNLALEASQILFGNATSETLRKIDENTFLSVFEGVPQYEIAAADLK 359

Query: 348 RGMGLLTLIV-KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+ ++  +  K    +S  EARR LKSNAI IN   +  E+  I          I    
Sbjct: 360 AGISIVDFLADKTAIMSSKGEARRALKSNAIGINKEKVQGEETIIGESHLIDGKYILAQS 419

Query: 407 GKKNHIIC 414
           GKKN+ + 
Sbjct: 420 GKKNYFLV 427


>gi|302848016|ref|XP_002955541.1| hypothetical protein VOLCADRAFT_83275 [Volvox carteri f.
           nagariensis]
 gi|300259164|gb|EFJ43394.1| hypothetical protein VOLCADRAFT_83275 [Volvox carteri f.
           nagariensis]
          Length = 520

 Score =  290 bits (743), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 149/436 (34%), Positives = 242/436 (55%), Gaps = 24/436 (5%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILC--SQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
           + + +++L  RG + +++   EL+     ++G ++ Y G+D TA SLH G+L  +++L W
Sbjct: 84  RPNVVALLRSRGLVQEVTGGEELEAAAGGAEGPLSVYCGFDPTADSLHLGNLLGIVVLSW 143

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT--GK 120
            Q+ GH+P++L+GG T  +GDPS R   R ++  ++I+ N+  I+ +    +   +  G 
Sbjct: 144 FQRCGHQPVALLGGATGRVGDPSGRSTERPVLSEEQIEHNVAAIRSLLQDILTRNSPPGA 203

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +LNN  W   + ++  LREIG F  V  M++ +SVR+R++ EQ +SF EF Y +LQ
Sbjct: 204 PAVRVLNNLDWFGPMSFLTFLREIGKFARVGAMMAKDSVRTRMESEQGISFTEFTYQLLQ 263

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDL------GERLKTPKLFALTSPLLTTASG 234
            YDFV L + ++ R+Q+GGSDQWGNI  G DL      GE  + P  + LT PLL  + G
Sbjct: 264 GYDFVHLCREHNVRVQIGGSDQWGNITAGTDLVRKLLGGEDREAPACYGLTFPLLVDSEG 323

Query: 235 TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE 294
            K GK++ GAIWL+ E  SPY F+QY   + DADV+   K LT LP+ EID +    G  
Sbjct: 324 RKFGKSVGGAIWLSAEKLSPYKFYQYLFQVTDADVIKLLKMLTFLPLEEIDGLQAAMGAP 383

Query: 295 ---INEAKKIIATEITTMVHGRE---------EAEKAATAA-MECFDMSIHSQHMPTISI 341
               N A++ +A E+T  VHG E         EA K   A  ++   +   +   P+ ++
Sbjct: 384 GYVPNTAQRRLAEEVTRFVHGEEGLAQAIKATEALKPGAATQLDAATLETVAGDAPSATL 443

Query: 342 SKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
           ++  V  G+ L  ++V      S + AR+ +K   + +NN+ +S E   +K  D      
Sbjct: 444 TRGSV-EGVPLADILVAVKLQPSKSAARKLIKGGGVYLNNAKVSEELYTVKPSDLIDGRL 502

Query: 402 IKLSFGKKNHIICHLC 417
           + ++ GKKN ++  + 
Sbjct: 503 LLIAAGKKNKMLVRVA 518


>gi|288549573|ref|ZP_05967462.2| tyrosine--tRNA ligase [Enterobacter cancerogenus ATCC 35316]
 gi|288318425|gb|EFC57363.1| tyrosine--tRNA ligase [Enterobacter cancerogenus ATCC 35316]
          Length = 428

 Score =  290 bits (742), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 159/422 (37%), Positives = 234/422 (55%), Gaps = 13/422 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q 
Sbjct: 8   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQM 67

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++     +QE ++KI+   + F+ +  G   A+ 
Sbjct: 68  AGHKPVALVGGATGLIGDPSFKAAERKLNTEDTVQEWVDKIRKQVAPFLDFNCGDNAAIA 127

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDF 184
            NN  W   +  +  LR+IG  FSVN+M++ E+V+ RL R+ Q +SF EF+Y +LQ YDF
Sbjct: 128 ANNYDWFGGMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDQGISFTEFSYNLLQGYDF 187

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K +   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 188 ACLNKLHGVALQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 247

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + +  I+ +    K  GK    A+ +
Sbjct: 248 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMDIEAINALEEEDKNSGK-APRAQYV 306

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTL 355
           +A E+T +VHG E    A       F+ ++        + +    +   E+ +G  L+  
Sbjct: 307 LADEVTKLVHGEEGLAAAKRITASLFNGTLSDLSEADFEQLAQDGVPMVEMEKGADLMQA 366

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +V +    S  +AR+ + SNAI IN    ++ +      D        L  GKKN+  C 
Sbjct: 367 LVDSELQPSRGQARKTIASNAITINGEKQADPEYTFVEGDRLYGRYTLLRRGKKNY--CL 424

Query: 416 LC 417
           +C
Sbjct: 425 VC 426


>gi|254671610|emb|CBA09297.1| Tyrosyl-tRNA synthetase [Neisseria meningitidis alpha153]
 gi|325127584|gb|EGC50507.1| tyrosyl-tRNA synthetase [Neisseria meningitidis N1568]
          Length = 431

 Score =  290 bits (742), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 158/379 (41%), Positives = 222/379 (58%), Gaps = 12/379 (3%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I Q ++   LD L ++  +  Y G+D TA SLH GHL  ++ L   Q+ GH PI
Sbjct: 7   LQSRGLIAQTTDIEALDALLNEQKIALYCGFDPTADSLHIGHLLPVLALRRFQQAGHTPI 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+   R +  ++ +   +E I+   + F+ +  G   A+M NN  W
Sbjct: 67  ALVGGATGMIGDPSFKAAERSLNSAETVAGWVESIRNQLTPFLSFEGGNA-AIMANNADW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQS-LSFLEFNYMILQAYDFVELAKN 190
              +  +D LR+IG  FSVN ML+ ESV+ R+ R+ + +SF EF Y +LQ YDF EL K 
Sbjct: 126 FGKMNCLDFLRDIGKHFSVNAMLNKESVKQRIDRDGAGISFTEFAYSLLQGYDFAELNKR 185

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKE 250
           +   L++GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  GA+WLN +
Sbjct: 186 HGAVLEIGGSDQWGNITAGIDLTRRLNQKQVFGLTLPLVTKSDGTKFGKTEGGAVWLNAK 245

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM-AKLQGK-EINEAKKIIATEITT 308
            TSPY F+Q+W  + DADV  F K  T L + EID + AK Q      EA++I+A E+T 
Sbjct: 246 KTSPYQFYQFWLKVADADVYKFLKYFTFLSIEEIDAVEAKDQASGSKPEAQRILAEEMTR 305

Query: 309 MVHGREEAEKAATAAMECFDMSIHS-------QHMPTISISKDEVSRGMGLLTLIVKAGF 361
           ++HG EEA  AA    E       S       + +    +   EVS G+ ++  +VK G 
Sbjct: 306 LIHG-EEALAAAQRISESLFAEDQSSLTESDFEQLALDGLPAFEVSDGINVVEALVKTGL 364

Query: 362 ATSTNEARRHLKSNAIKIN 380
           A+S  EAR  + S A+ +N
Sbjct: 365 ASSNKEARGFVNSKAVLLN 383


>gi|262193438|ref|YP_003264647.1| tyrosyl-tRNA synthetase [Haliangium ochraceum DSM 14365]
 gi|262076785|gb|ACY12754.1| tyrosyl-tRNA synthetase [Haliangium ochraceum DSM 14365]
          Length = 432

 Score =  290 bits (742), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 153/419 (36%), Positives = 232/419 (55%), Gaps = 14/419 (3%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R  +  +S+  EL  L     ++ Y GYD TA+SLH G+L   ++L  LQ+ G +PI
Sbjct: 11  LETRHLLQDVSHREELGELLQGEAISVYAGYDPTATSLHVGNLIPTIILARLQRIGCRPI 70

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDP+ + + R ++    +Q N+  I+     F  +    T A ++NN  W
Sbjct: 71  ALVGGATGMIGDPTGKSDERNLLDEDTLQANVAAIRAQLGRFFDFDDSATGAKLVNNLDW 130

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK-REQSLSFLEFNYMILQAYDFVELAKN 190
              I +I  LR+IG   +VN M + +SVRSRL+ R   +S+ EF+YM+LQAYDFV LAK 
Sbjct: 131 FRDIGFIPFLRDIGKLLTVNYMTAKDSVRSRLEDRATGISYTEFSYMLLQAYDFVHLAKE 190

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA-IWLNK 249
           + CRLQ+GGSDQWGNI  GI+L  +L    ++ LT PLL  +SG KMGKT SG  IWL+ 
Sbjct: 191 HGCRLQVGGSDQWGNITAGIELQRKLGRESVYGLTGPLLLDSSGEKMGKTASGMRIWLDP 250

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATEIT 307
           E TSPY F+QYW N  D DV    +  +   + EID + +  G+   +   +  +A ++T
Sbjct: 251 ERTSPYAFYQYWLNTPDDDVARLLRVFSWRSLDEIDELVRAHGEAPQKRLGQSALAEDLT 310

Query: 308 TMVHGREEAEKAATAAMECFDMSIH----------SQHMPTISISKDEVSRGMGLLTLIV 357
             VHG E    A  A+   F  S+           +  +PT S+ + ++  G+ LL L+ 
Sbjct: 311 DWVHGEEAKRNALAASQVMFGGSLENLNDAALQPLTADLPTTSLPRQQLESGIPLLELLA 370

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +   A S   ARR ++   + +NN  +++    +  +D  +   + L  GKKN+ +   
Sbjct: 371 QTKLAASKGAARRLVQGGGVYVNNIRVADVNKTLLPEDLGTETIMILRAGKKNYHLVQF 429


>gi|116628549|ref|YP_821168.1| tyrosyl-tRNA synthetase [Streptococcus thermophilus LMD-9]
 gi|122266856|sp|Q03IK0|SYY_STRTD RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|116101826|gb|ABJ66972.1| tyrosyl-tRNA synthetase [Streptococcus thermophilus LMD-9]
          Length = 418

 Score =  290 bits (742), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 156/417 (37%), Positives = 230/417 (55%), Gaps = 21/417 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  GHKP 
Sbjct: 7   LKARGLIFQTTDEEALVKAFEEGPVSFYTGYDPTADSLHLGHLVAILTSRRLQLAGHKPY 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF D  R +   + ++  +EKI+G  S F+ +  G   A+M+NN  W
Sbjct: 67  ALVGGATGLIGDPSFNDAERSLQTKETVEGWVEKIQGQLSRFLDFENGDNKAVMVNNYDW 126

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
             S+ +ID LR++G +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF EL   Y
Sbjct: 127 FGSVSFIDFLRDVGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFYELNAKY 184

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
              LQ+GGSDQWGN+  G +L  R        +T PL+T ++G K GK+   A+WL+   
Sbjct: 185 GVTLQIGGSDQWGNMTAGTELLRRKADKSGHVITVPLITDSTGKKFGKSEGNAVWLDATK 244

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIATEITTM 309
           T+PY  +Q+W N+ D D V F K  T L + EI+ + K   Q +    A+K++A E+ T+
Sbjct: 245 TTPYEMYQFWLNVMDDDAVRFLKIFTFLSLEEIEEIGKEFDQARHQRLAQKVLAREVVTL 304

Query: 310 VHGREEAEKAATAAMECF----------DMSIHSQHMPTISISKDEVSRGMGLLTLIVKA 359
           VHG+E  E+A     + F          D+ +    +PT  IS DE    + ++ L+V A
Sbjct: 305 VHGKEAYEQAVHITEQLFAGNLKALSARDLKVALNGVPTYEISADE---NLNIVELLVNA 361

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN--IKLSFGKKNHIIC 414
             + S  +AR  +++ AI IN   + +  L   L D D   N    +  GKK + + 
Sbjct: 362 KISPSKRQAREDVQNGAIYINGERVQD--LDYTLSDTDKIDNEITVIRRGKKKNFVL 416


>gi|261379949|ref|ZP_05984522.1| tyrosine--tRNA ligase [Neisseria subflava NJ9703]
 gi|284797147|gb|EFC52494.1| tyrosine--tRNA ligase [Neisseria subflava NJ9703]
          Length = 432

 Score =  290 bits (742), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 157/380 (41%), Positives = 223/380 (58%), Gaps = 14/380 (3%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I Q ++   LD L ++  ++ Y G+D TA SLH GHL  ++ L   Q+ GH PI
Sbjct: 8   LQSRGLIAQTTDIEALDALLNEQKISLYCGFDPTADSLHIGHLLPVLALRRFQQAGHTPI 67

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+   R +  ++ +   +E I+   + F+ +  G   A+M NN  W
Sbjct: 68  ALVGGATGMIGDPSFKAAERSLNSAETVAGWVESIRNQLTPFLSF-DGDNAAIMANNADW 126

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYDFVELAKN 190
             S+  +D LR+IG  FSVN ML+ ESV+ R++R+   +SF EF Y +LQ YDF EL K 
Sbjct: 127 FGSMNCLDFLRDIGKHFSVNAMLNKESVKQRIERDDVGISFTEFAYSLLQGYDFAELNKR 186

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKE 250
           +   L++GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  GA+WLN +
Sbjct: 187 HGAVLEIGGSDQWGNITAGIDLTRRLHQKQVFGLTLPLVTKSDGTKFGKTEGGAVWLNAK 246

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKIIATEIT 307
            TSPY F+Q+W  + DADV  F K  T L + EID +    K  G +  EA++I+A E+T
Sbjct: 247 KTSPYQFYQFWLKVADADVYKFLKYFTFLSIEEIDAIEAKDKASGTK-PEAQRILAEEMT 305

Query: 308 TMVHGREEAEKAATAAMECFDMSIHS-------QHMPTISISKDEVSRGMGLLTLIVKAG 360
            ++HG EEA  AA    E       S       + +    +   EVS  + ++  +VK G
Sbjct: 306 RLIHG-EEALAAAQRISESLFAEDQSHLTESDFEQLALDGLPTFEVSESLNVVETLVKTG 364

Query: 361 FATSTNEARRHLKSNAIKIN 380
            A+S  EAR  + S A+ +N
Sbjct: 365 LASSNKEARGFVNSKAVLLN 384


>gi|156934169|ref|YP_001438085.1| tyrosyl-tRNA synthetase [Cronobacter sakazakii ATCC BAA-894]
 gi|189083654|sp|A7MMK1|SYY_ENTS8 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|156532423|gb|ABU77249.1| hypothetical protein ESA_01996 [Cronobacter sakazakii ATCC BAA-894]
          Length = 428

 Score =  290 bits (741), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 158/422 (37%), Positives = 238/422 (56%), Gaps = 13/422 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q 
Sbjct: 8   SNLIKQLQERGLVAQVTDEEALAQRLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQM 67

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++     +QE ++KI+   + F+ +  G+  A+ 
Sbjct: 68  AGHKPVALVGGATGLIGDPSFKATERKLNTEDTVQEWVDKIRRQVAPFLDFDCGENSAIA 127

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYDF 184
            NN  W  ++  +  LR+IG  FSVN+M++ E+V+ RL R+   +SF EF+Y +LQ YDF
Sbjct: 128 ANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDVGISFTEFSYNLLQGYDF 187

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K +   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  GA
Sbjct: 188 ACLNKLHGVALQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKSDGTKFGKTEGGA 247

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+ +    K  GK    A+ +
Sbjct: 248 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIDEINALEEEDKNSGK-APRAQYV 306

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTL 355
           +A ++T +VHG E    A       F+ ++++      + +    +   E+ +G  L+  
Sbjct: 307 LAEQVTRLVHGEEGLAAAKRITESLFNGNLNALSEADFEQLAQNGVPMIEMEKGADLMQA 366

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +V +    S  +AR+ + SNAI IN    S+ +      D        L  GKKN+  C 
Sbjct: 367 LVDSELQPSRGQARKTIASNAITINGEKQSDPEYTFSDSDRLFGRYTLLRRGKKNY--CL 424

Query: 416 LC 417
           +C
Sbjct: 425 VC 426


>gi|315222773|ref|ZP_07864660.1| tyrosyl-tRNA synthetase [Streptococcus anginosus F0211]
 gi|315188136|gb|EFU21864.1| tyrosyl-tRNA synthetase [Streptococcus anginosus F0211]
          Length = 418

 Score =  290 bits (741), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 155/417 (37%), Positives = 232/417 (55%), Gaps = 21/417 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L ERG + Q ++   L    ++G V+ Y GYD TA SLH GHL  ++++  LQ  GHKP 
Sbjct: 7   LKERGLVFQTTDEDALRKALAEGNVSFYSGYDPTADSLHLGHLVPILVMKHLQLAGHKPY 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+D  R +     ++  +  I+   S F+ +  G   A M+NN  W
Sbjct: 67  ALVGGATGLIGDPSFKDTERSLQTKDTVEGWVRSIQAQVSRFLDFENGDNKAEMVNNYDW 126

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
              I +ID LR++G +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF EL + Y
Sbjct: 127 FSDISFIDFLRDVGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFFELNRQY 184

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
              LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WLN + 
Sbjct: 185 GVTLQIGGSDQWGNMTAGTELLRRKADKTAHVITVPLITDATGKKFGKSEGNAVWLNADK 244

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATEITTM 309
           TSPY  +Q+W N+ DAD V F K  T LP+ EI+ + K      +E  A+KI+A E+ T+
Sbjct: 245 TSPYEMYQFWMNVMDADAVRFLKIFTLLPLDEIEEIRKQFEAAPHERLAQKILAREVVTL 304

Query: 310 VHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIVKA 359
           VHG +  ++A     + F  +I +          + +P   +  D+    + ++ L+V A
Sbjct: 305 VHGEKAYKEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVKADD---NLNIVELLVTA 361

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN--IKLSFGKKNHIIC 414
           G   S  +AR  +++ AI IN   I +  L  +L D D   N    +  GKK + + 
Sbjct: 362 GVVNSKRQAREDVQNGAIYINGERIQD--LDYRLTDADKLENELTVIRRGKKKYFVL 416


>gi|216264032|ref|ZP_03436026.1| tyrosyl-tRNA synthetase [Borrelia afzelii ACA-1]
 gi|215980076|gb|EEC20898.1| tyrosyl-tRNA synthetase [Borrelia afzelii ACA-1]
          Length = 405

 Score =  290 bits (741), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 156/401 (38%), Positives = 237/401 (59%), Gaps = 7/401 (1%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L++L +RGF+ Q ++ + L  L  +  +  Y G D T+SSLH GHL   + +  L++ GH
Sbjct: 5   LNLLHKRGFLKQCTSLKVLSDLMDREKIVFYAGVDATSSSLHIGHLIPFLAMMHLRQHGH 64

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
            PI L+G  T+ IGDPS + E R+++  +EI  N   IK       K+ +       ++N
Sbjct: 65  IPIVLIGDSTTKIGDPSGKSEMRKILSLEEISNNAFSIKNQLQRITKFSS----KCFIHN 120

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL ++ YI+ LR+IG  FS+NRMLSFE+ + RL  +  LSF+EFNY +LQ+YD+  L 
Sbjct: 121 SNWLDNLNYIEFLRDIGIHFSINRMLSFETYKKRL--DFGLSFIEFNYQLLQSYDYYMLN 178

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
           K  +CRLQ+GG DQWGNII GIDL  +    + F LT PL+T + G KMGK+  GA++L+
Sbjct: 179 KIRNCRLQIGGDDQWGNIISGIDLIRKKAGVETFGLTFPLITRSDGKKMGKSEKGAVYLD 238

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITT 308
             + S Y+F+QY+RN  D+DV +F    T L   EI+ ++  +G  +N+AK+I+A EIT 
Sbjct: 239 SSLYSIYDFYQYFRNTSDSDVKTFLYLFTFLEEDEIELISNFKGNSLNKAKEILAFEITK 298

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
           +VHG  EA K   A+   F  S    ++P    S   +   + L+ L++ +    S +E 
Sbjct: 299 IVHGEAEALKVQEASFAAFRGSGDRSNIPFFKFSFSNLEEEVLLINLMLDSKIVPSKSEG 358

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
           RR + S  + IN   + N+   +  +DF++   I+L  GKK
Sbjct: 359 RRLIDSGGVYINGKRVENQNHCLTRKDFNNN-EIELRVGKK 398


>gi|15594715|ref|NP_212504.1| tyrosyl-tRNA synthetase (tyrS) [Borrelia burgdorferi B31]
 gi|216264532|ref|ZP_03436524.1| tyrosyl-tRNA synthetase [Borrelia burgdorferi 156a]
 gi|218249813|ref|YP_002374887.1| tyrosyl-tRNA synthetase [Borrelia burgdorferi ZS7]
 gi|226321685|ref|ZP_03797211.1| tyrosyl-tRNA synthetase [Borrelia burgdorferi Bol26]
 gi|6226205|sp|O51343|SYY_BORBU RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|254783571|sp|B7J1U2|SYY_BORBZ RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|2688267|gb|AAC66744.1| tyrosyl-tRNA synthetase (tyrS) [Borrelia burgdorferi B31]
 gi|215981005|gb|EEC21812.1| tyrosyl-tRNA synthetase [Borrelia burgdorferi 156a]
 gi|218165001|gb|ACK75062.1| tyrosyl-tRNA synthetase [Borrelia burgdorferi ZS7]
 gi|226232874|gb|EEH31627.1| tyrosyl-tRNA synthetase [Borrelia burgdorferi Bol26]
          Length = 405

 Score =  290 bits (741), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 155/401 (38%), Positives = 238/401 (59%), Gaps = 7/401 (1%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           LS+L +RGF+ Q ++ + L  L  +  +  Y G D T+SSLH GHL   + +  L++ GH
Sbjct: 5   LSLLHKRGFLKQCTSLKVLSDLMDREKIVFYAGVDATSSSLHIGHLIPFLAMMHLRQHGH 64

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
            PI L+G  T+ IGDPS + E R+++ S+EI  N   IK       K+    T    ++N
Sbjct: 65  MPIVLIGDSTAKIGDPSGKSEMRKILSSEEIGNNALLIKNQLQRITKF----TSECFIHN 120

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL ++ YI+ LR++G  FSVNRMLSFE+ + R+  +  LSF+EFNY +LQ+YD+  L 
Sbjct: 121 SNWLDNLNYIEFLRDVGMHFSVNRMLSFETYKRRM--DFGLSFIEFNYQLLQSYDYYMLN 178

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
           K  +CRLQ+GG DQWGNII G+DL  +    + F LT PL+T + G KMGK+  GA++L+
Sbjct: 179 KIKNCRLQIGGDDQWGNIISGVDLIRKKNGSETFGLTFPLITRSDGKKMGKSEKGAVYLD 238

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITT 308
             + S Y+F+QY+RN  D+DV +F    T L   EI+ ++  +G  +N+AK+I+A EIT 
Sbjct: 239 SNLFSIYDFYQYFRNTSDSDVKTFLYLFTFLEEDEIELISNFKGNSLNKAKEILAFEITK 298

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
           +VHG  EA K   A+   F  S    ++P    S   +   + L+ L++ +    S +E 
Sbjct: 299 IVHGEAEALKVQEASFAAFRGSGDRSNIPFFKFSFSSLKEEILLVDLMLDSKIVPSKSEG 358

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
           RR + S  + IN   + ++   +  +DF++   ++L  GKK
Sbjct: 359 RRLIDSGGVYINGKRVESQSHLLTKKDFNNN-EVELRVGKK 398


>gi|167468642|ref|ZP_02333346.1| tyrosyl-tRNA synthetase [Yersinia pestis FV-1]
          Length = 415

 Score =  289 bits (740), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 155/384 (40%), Positives = 219/384 (57%), Gaps = 21/384 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           + ERG + Q+++   L    +QG ++ Y G+D TA SLH GHL  L+ L   Q  GH+P+
Sbjct: 1   MPERGLVAQVTDEDALAERLAQGPISLYCGFDPTADSLHLGHLVPLLCLKRFQLAGHRPV 60

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+   R++     + E +EKI+   S F+ +  G+  A+  NN  W
Sbjct: 61  ALVGGATGMIGDPSFKASERKLNTEDTVNEWVEKIRHQVSPFLDFDCGENSAIAANNYDW 120

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQS-LSFLEFNYMILQAYDFVELAKN 190
              +  +  LR+IG  FSVN+M++ E+V+ RL R+ S +SF EF+Y +LQAYDF  L KN
Sbjct: 121 FGGMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDSGISFTEFSYNLLQAYDFACLNKN 180

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKE 250
           +   LQ+GGSDQWGNI  GIDL  RL   +++ LT PL+T A GTK GKT  GA+WL+ +
Sbjct: 181 HGVALQIGGSDQWGNITSGIDLTRRLHQQQVYGLTVPLITKADGTKFGKTEGGAVWLDPK 240

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKIIATEIT 307
            TSPY F+Q+W N  DADV  F K  T + + EI+ +    K  GK    A+ ++A  +T
Sbjct: 241 KTSPYKFYQFWINTADADVYRFLKFFTFMSLEEINALEEEDKNSGK-APRAQYVLAENVT 299

Query: 308 TMVHGREEAEKAATAAMECFDMSIHS-----------QHMPTISISKDEVSRGMGLLTLI 356
            MVHG E    A       F   +H              MPT+     E++R   L   +
Sbjct: 300 GMVHGPEGLAAAKRITDSLFSGDLHDMTEADFAQLAQDGMPTV-----ELNRDADLQQAL 354

Query: 357 VKAGFATSTNEARRHLKSNAIKIN 380
           V A    S  +AR  + SNA+ IN
Sbjct: 355 VNAELVPSRGQARTMIGSNAVAIN 378


>gi|319639345|ref|ZP_07994096.1| tyrosyl-tRNA synthetase [Neisseria mucosa C102]
 gi|317399529|gb|EFV80199.1| tyrosyl-tRNA synthetase [Neisseria mucosa C102]
          Length = 431

 Score =  289 bits (740), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 157/380 (41%), Positives = 223/380 (58%), Gaps = 14/380 (3%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I Q ++   LD L ++  ++ Y G+D TA SLH GHL  ++ L   Q+ GH PI
Sbjct: 7   LQSRGLIAQTTDIEALDALLNEQKISLYCGFDPTADSLHIGHLLPVLALRRFQQAGHTPI 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+   R +  ++ +   +E I+   + F+ +  G   A+M NN  W
Sbjct: 67  ALVGGATGMIGDPSFKATERSLNSAETVAGWVESIRNQLTPFLSF-EGDNAAIMANNADW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYDFVELAKN 190
             S+  +D LR+IG  FSVN ML+ ESV+ R++R+   +SF EF Y +LQ YDF EL K 
Sbjct: 126 FGSMNCLDFLRDIGKHFSVNAMLNKESVKQRIERDDVGISFTEFAYSLLQGYDFAELNKR 185

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKE 250
           +   L++GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  GA+WLN +
Sbjct: 186 HGAVLEIGGSDQWGNITAGIDLTRRLHQKQVFGLTLPLVTKSDGTKFGKTEGGAVWLNAK 245

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKIIATEIT 307
            TSPY F+Q+W  + DADV  F K  T L + EID +    K  G +  EA++I+A E+T
Sbjct: 246 KTSPYQFYQFWLKVADADVYKFLKYFTFLSIEEIDAIEAKDKASGTK-PEAQRILAEEMT 304

Query: 308 TMVHGREEAEKAATAAMECFDMSIHS-------QHMPTISISKDEVSRGMGLLTLIVKAG 360
            ++HG EEA  AA    E       S       + +    +   EVS  + ++  +VK G
Sbjct: 305 RLIHG-EEALAAAQRISESLFAEDQSHLTESDFEQLALDGLPTFEVSESLNVVETLVKTG 363

Query: 361 FATSTNEARRHLKSNAIKIN 380
            A+S  EAR  + S A+ +N
Sbjct: 364 LASSNKEARGFVNSKAVLLN 383


>gi|325141639|gb|EGC64101.1| tyrosyl-tRNA synthetase [Neisseria meningitidis 961-5945]
          Length = 431

 Score =  289 bits (740), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 156/383 (40%), Positives = 226/383 (59%), Gaps = 20/383 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I Q ++   LD L ++  ++ Y G+D TA SLH GHL  ++ L   Q+ GH PI
Sbjct: 7   LQSRGLIAQTTDIEALDALLNEQKISLYCGFDPTADSLHIGHLLPVLALRRFQQAGHTPI 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+   R +  ++ +   +E I+   + F+ +  G   A+M NN  W
Sbjct: 67  ALVGGATGMIGDPSFKAAERSLNSAETVAGWVESIRSQLTPFLSFEGGNA-AIMANNADW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQS-LSFLEFNYMILQAYDFVELAKN 190
              +  +D LR+IG  FSVN ML+ ESV+ R+ R+ + +SF EF Y +LQ YDF EL K 
Sbjct: 126 FGKMNCLDFLRDIGKHFSVNAMLNKESVKQRIDRDGAGISFTEFAYSLLQGYDFAELNKR 185

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKE 250
           +   L++GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  GA+WLN +
Sbjct: 186 HGAVLEIGGSDQWGNITAGIDLTRRLYQKQVFGLTLPLVTKSDGTKFGKTEGGAVWLNAK 245

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM-AKLQGK-EINEAKKIIATEITT 308
            TSPY F+Q+W  + DADV  F K  T L + EID + AK Q      EA++I+A E+T 
Sbjct: 246 KTSPYQFYQFWLKVADADVYKFLKYFTFLSIEEIDAVEAKDQASGSKPEAQRILAEEMTR 305

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTIS-----------ISKDEVSRGMGLLTLIV 357
           ++HG E     A AA +    S+ ++   +++           +   EVS G+ ++  +V
Sbjct: 306 LIHGEE-----ALAAAQRISGSLFAEDQSSLTESDFEQLALDGLPAFEVSDGINVVEALV 360

Query: 358 KAGFATSTNEARRHLKSNAIKIN 380
           K G A+S  EAR  + S A+ +N
Sbjct: 361 KTGLASSNKEARGFVNSKAVLLN 383


>gi|260597789|ref|YP_003210360.1| tyrosyl-tRNA synthetase [Cronobacter turicensis z3032]
 gi|260216966|emb|CBA30602.1| Tyrosyl-tRNA synthetase [Cronobacter turicensis z3032]
          Length = 424

 Score =  289 bits (740), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 157/422 (37%), Positives = 238/422 (56%), Gaps = 13/422 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q 
Sbjct: 4   SNLIKQLQERGLVAQVTDEEALAQRLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQM 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++     +QE ++KI+   + F+ +  G+  A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKATERKLNTEDTVQEWVDKIRRQVAPFLDFDCGENSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYDF 184
            NN  W  S+  +  LR+IG  FSVN+M++ E+V+ RL R+   +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGSMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDVGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L + +   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  GA
Sbjct: 184 ACLNELHGVALQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKSDGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+ +    K  GK    A+ +
Sbjct: 244 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSLDEINALEEEDKNSGK-APRAQYV 302

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTL 355
           +A ++T +VHG E    A       F+ ++++      + +    +   E+ +G  L+  
Sbjct: 303 LAEQVTRLVHGEEGLAAAKRITESLFNGNLNALSEADFEQLAQDGVPMIEMEKGADLMQA 362

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +V +    S  +AR+ + SNAI IN    ++ +      D        L  GKKN+  C 
Sbjct: 363 LVDSELQPSRGQARKTIASNAITINGEKQADPEYTFSDSDRLFGRYTLLRRGKKNY--CL 420

Query: 416 LC 417
           +C
Sbjct: 421 VC 422


>gi|225077237|ref|ZP_03720436.1| hypothetical protein NEIFLAOT_02292 [Neisseria flavescens
           NRL30031/H210]
 gi|224951381|gb|EEG32590.1| hypothetical protein NEIFLAOT_02292 [Neisseria flavescens
           NRL30031/H210]
          Length = 431

 Score =  289 bits (740), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 157/380 (41%), Positives = 222/380 (58%), Gaps = 14/380 (3%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I Q ++   LD L ++  +  Y G+D TA SLH GHL  ++ L   Q+ GH PI
Sbjct: 7   LQSRGLIAQTTDIEALDALLNEQKIALYCGFDPTADSLHIGHLLPVLALRRFQQAGHTPI 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+   R +  ++ +   +E I+     F+ +  G+  A+M NN  W
Sbjct: 67  ALVGGATGMIGDPSFKAAERSLNSAETVAGWVESIRNQLKPFLSF-EGENAAIMANNADW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYDFVELAKN 190
             S+  +D LR+IG  FSVN ML+ ESV+ R++R+   +SF EF Y +LQ YDF EL K 
Sbjct: 126 FGSMNCLDFLRDIGKHFSVNAMLNKESVKQRIERDDVGISFTEFAYSLLQGYDFAELNKR 185

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKE 250
           +   L++GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  GA+WLN +
Sbjct: 186 HGAVLEIGGSDQWGNITAGIDLTRRLHQKQVFGLTLPLVTKSDGTKFGKTEGGAVWLNAK 245

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKIIATEIT 307
            TSPY F+Q+W  + DADV  F K  T L + EID +    K  G +  EA++I+A E+T
Sbjct: 246 KTSPYQFYQFWLKVADADVYKFLKYFTFLSIEEIDAIEAKDKASGTK-PEAQRILAEEMT 304

Query: 308 TMVHGREEAEKAATAAMECFDMSIHS-------QHMPTISISKDEVSRGMGLLTLIVKAG 360
            ++HG EEA  AA    E       S       + +    +   EVS  + ++  +VK G
Sbjct: 305 RLIHG-EEALAAAQRISESLFAEDQSRLTESDFEQLALDGLPTFEVSESLNVVETLVKTG 363

Query: 361 FATSTNEARRHLKSNAIKIN 380
            A+S  EAR  + S A+ +N
Sbjct: 364 LASSNKEARGFVNSKAVLLN 383


>gi|224532002|ref|ZP_03672634.1| tyrosyl-tRNA synthetase [Borrelia valaisiana VS116]
 gi|224511467|gb|EEF81873.1| tyrosyl-tRNA synthetase [Borrelia valaisiana VS116]
          Length = 405

 Score =  289 bits (740), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 158/401 (39%), Positives = 236/401 (58%), Gaps = 7/401 (1%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L+ L +RGF+ Q ++ + L  L  +  +  Y G D T+SSLH GHL   + +  L++ GH
Sbjct: 5   LNRLHKRGFLKQCTSLKVLSDLMDREKIVFYAGVDATSSSLHIGHLIPFLAMMHLRQYGH 64

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
            PI L+G  T+ IGDPS + E R+++ S+EI  N   IK       K+ +       ++N
Sbjct: 65  IPIVLIGDSTTKIGDPSGKSEMRKILSSEEISNNAVLIKNQLQRITKFSS----KCFIHN 120

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL ++ YI+ LR+IG  FSVNRMLSFE+ + RL  +  LSF+EFNY +LQ+YD+  L 
Sbjct: 121 SNWLDNLNYIEFLRDIGIHFSVNRMLSFETYKRRL--DFGLSFIEFNYQLLQSYDYYMLN 178

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
           K  +CRLQ+GG DQWGNII G+DL  R    + F LT PL+T + G KMGK+  GA++L+
Sbjct: 179 KLENCRLQIGGDDQWGNIISGVDLIRRKFGAEAFGLTFPLITRSDGKKMGKSEKGAVYLD 238

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITT 308
             + S Y+F+QY+RN  D+DV +F    T L   EI+ ++  +G  +N+AK+I+A EIT 
Sbjct: 239 SNLYSIYDFYQYFRNTSDSDVKTFLYLFTFLEEDEIELISNFKGNSLNKAKEILAFEITK 298

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
           +VHG  EA K   A+   F  S    ++P    S   +   + L+ L++ +    S +E 
Sbjct: 299 IVHGEAEALKVQEASFAAFRGSGDRSNIPFFKFSFSSLEEEVLLINLMLDSKIVPSKSEG 358

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
           RR + S  + IN   + N+   +   DF++   I+L  GKK
Sbjct: 359 RRLIDSGGVYINGKRVENQNHCLTRVDFNNN-EIELRVGKK 398


>gi|161869380|ref|YP_001598547.1| tyrosyl-tRNA synthetase [Neisseria meningitidis 053442]
 gi|189083662|sp|A9M1J5|SYY_NEIM0 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|161594933|gb|ABX72593.1| tyrosyl-tRNA synthetase [Neisseria meningitidis 053442]
          Length = 431

 Score =  289 bits (740), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 158/379 (41%), Positives = 221/379 (58%), Gaps = 12/379 (3%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R  I Q ++   LD L ++  +  Y G+D TA SLH GHL  ++ L   Q+ GH PI
Sbjct: 7   LQSRDLIAQTTDIEALDALLNEQKIALYCGFDPTADSLHIGHLLPVLALRRFQQAGHTPI 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+   R +  ++ +   +E I+   + F+ +  G   A+M NN  W
Sbjct: 67  ALVGGATGMIGDPSFKAAERSLNSAETVAGWVESIRNQLTPFLSFEGGNA-AIMANNADW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQS-LSFLEFNYMILQAYDFVELAKN 190
              +  +D LR+IG  FSVN ML+ ESV+ R+ R+ + +SF EF Y +LQ YDF EL K 
Sbjct: 126 FGKMNCLDFLRDIGKHFSVNAMLNKESVKQRIDRDGAGISFTEFAYSLLQGYDFAELNKR 185

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKE 250
           Y   L++GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  GA+WLN +
Sbjct: 186 YGAVLEIGGSDQWGNITAGIDLTRRLNQKQVFGLTLPLVTKSDGTKFGKTEGGAVWLNAK 245

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM-AKLQGK-EINEAKKIIATEITT 308
            TSPY F+Q+W  + DADV  F K  T L + EID + AK Q      EA++I+A E+T 
Sbjct: 246 KTSPYQFYQFWLKVADADVYKFLKYFTFLSIEEIDAVEAKDQASGSKPEAQRILAEEMTR 305

Query: 309 MVHGREEAEKAATAAMECFDMSIHS-------QHMPTISISKDEVSRGMGLLTLIVKAGF 361
           ++HG EEA  AA    E       S       + +    +   EVS G+ ++  +VK G 
Sbjct: 306 LIHG-EEALAAAQRISESLFAEDQSSLTESDFEQLALDGLPAFEVSDGINVVEALVKTGL 364

Query: 362 ATSTNEARRHLKSNAIKIN 380
           A+S  EAR  + S A+ +N
Sbjct: 365 ASSNKEARGFVNSKAVLLN 383


>gi|121634247|ref|YP_974492.1| tyrosyl-tRNA synthetase [Neisseria meningitidis FAM18]
 gi|189083663|sp|A1KS60|SYY_NEIMF RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|120865953|emb|CAM09690.1| putative tyrosyl-tRNA synthetase [Neisseria meningitidis FAM18]
 gi|308389938|gb|ADO32258.1| putative tyrosyl-tRNA synthetase [Neisseria meningitidis alpha710]
 gi|325131483|gb|EGC54190.1| tyrosyl-tRNA synthetase [Neisseria meningitidis M6190]
 gi|325137529|gb|EGC60111.1| tyrosyl-tRNA synthetase [Neisseria meningitidis ES14902]
          Length = 431

 Score =  289 bits (740), Expect = 6e-76,   Method: Compositional matrix adjust.
 Identities = 157/380 (41%), Positives = 223/380 (58%), Gaps = 14/380 (3%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I Q ++   LD L ++  ++ Y G+D TA SLH GHL  ++ L   Q+ GH PI
Sbjct: 7   LQSRGLIAQTTDIEALDALLNEQKISLYCGFDPTADSLHIGHLLPVLALRRFQQAGHTPI 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+   R +  ++ +   +E I+   + F+ +  G   A+M NN  W
Sbjct: 67  ALVGGATGMIGDPSFKAAERSLNSAETVAGWVESIRSQLTPFLSFEGGNA-AIMANNADW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQS-LSFLEFNYMILQAYDFVELAKN 190
              +  +D LR+IG  FSVN ML+ ESV+ R+ R+ + +SF EF Y +LQ YDF EL K 
Sbjct: 126 FGKMNCLDFLRDIGKHFSVNAMLNKESVKQRIDRDGAGISFTEFAYSLLQGYDFAELNKR 185

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKE 250
           +   L++GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  GA+WLN +
Sbjct: 186 HGAVLEIGGSDQWGNITAGIDLTRRLYQKQVFGLTLPLVTKSDGTKFGKTEGGAVWLNAK 245

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKIIATEIT 307
            TSPY F+Q+W  + DADV  F K  T L + EID +    K  G +  EA++I+A E+T
Sbjct: 246 KTSPYQFYQFWLKVADADVYKFLKYFTFLSIEEIDAIEAKDKASGSK-PEAQRILAEEMT 304

Query: 308 TMVHGREEAEKAATAAMECFDMSIHS-------QHMPTISISKDEVSRGMGLLTLIVKAG 360
            ++HG EEA  AA    E       S       + +    +   EVS G+ ++  +VK G
Sbjct: 305 RLIHG-EEALAAAQRISESLFAEDQSSLTESDFEQLALDGLPAFEVSDGINVVEALVKTG 363

Query: 361 FATSTNEARRHLKSNAIKIN 380
            A+S  EAR  + S A+ +N
Sbjct: 364 LASSNKEARGFVNSKAVLLN 383


>gi|241759449|ref|ZP_04757553.1| tyrosine--tRNA ligase [Neisseria flavescens SK114]
 gi|241320231|gb|EER56564.1| tyrosine--tRNA ligase [Neisseria flavescens SK114]
          Length = 432

 Score =  289 bits (739), Expect = 6e-76,   Method: Compositional matrix adjust.
 Identities = 157/380 (41%), Positives = 222/380 (58%), Gaps = 14/380 (3%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I Q ++   LD L ++  +  Y G+D TA SLH GHL  ++ L   Q+ GH PI
Sbjct: 8   LQSRGLIAQTTDIEALDALLNEQKIALYCGFDPTADSLHIGHLLPVLALRRFQQAGHTPI 67

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+   R +  ++ +   +E I+     F+ +  G+  A+M NN  W
Sbjct: 68  ALVGGATGMIGDPSFKAVERSLNSAETVAGWVESIRNQLKPFLSF-EGENAAIMANNADW 126

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYDFVELAKN 190
             S+  +D LR+IG  FSVN ML+ ESV+ R++R+   +SF EF Y +LQ YDF EL K 
Sbjct: 127 FGSMNCLDFLRDIGKHFSVNAMLNKESVKQRIERDDVGISFTEFAYSLLQGYDFAELNKR 186

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKE 250
           +   L++GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  GA+WLN +
Sbjct: 187 HGAVLEIGGSDQWGNITAGIDLTRRLHQKQVFGLTLPLVTKSDGTKFGKTEGGAVWLNAK 246

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKIIATEIT 307
            TSPY F+Q+W  + DADV  F K  T L + EID +    K  G +  EA++I+A E+T
Sbjct: 247 KTSPYQFYQFWLKVADADVYKFLKYFTFLSIEEIDAIEAKDKASGTK-PEAQRILAEEMT 305

Query: 308 TMVHGREEAEKAATAAMECFDMSIHS-------QHMPTISISKDEVSRGMGLLTLIVKAG 360
            ++HG EEA  AA    E       S       + +    +   EVS  + ++  +VK G
Sbjct: 306 RLIHG-EEALAAAQRISESLFAEDQSHLTESDFEQLALDGLPTFEVSESLNVVETLVKTG 364

Query: 361 FATSTNEARRHLKSNAIKIN 380
            A+S  EAR  + S A+ +N
Sbjct: 365 LASSNKEARGFVNSKAVLLN 384


>gi|225024266|ref|ZP_03713458.1| hypothetical protein EIKCOROL_01139 [Eikenella corrodens ATCC
           23834]
 gi|224943291|gb|EEG24500.1| hypothetical protein EIKCOROL_01139 [Eikenella corrodens ATCC
           23834]
          Length = 433

 Score =  289 bits (739), Expect = 6e-76,   Method: Compositional matrix adjust.
 Identities = 158/379 (41%), Positives = 222/379 (58%), Gaps = 12/379 (3%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I Q ++   L  L ++  +T Y G+D TA SLH GHL  ++ L   Q+ GH PI
Sbjct: 9   LQARGLIAQTTDIEALSTLLNEQKITLYCGFDPTADSLHIGHLLPVLALRRFQQAGHTPI 68

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+   R +  ++ +   +E I+     F+ +  G+  A+M NN  W
Sbjct: 69  ALVGGATGMIGDPSFKAVERSLNSAETVAGWVESIRNQLKPFLSF-EGENAAIMANNADW 127

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYDFVELAKN 190
             S+  +D LR+IG  FSVN ML+ ESV+ R+ R+   +SF EF Y +LQ+YDF EL K 
Sbjct: 128 FGSMNCLDFLRDIGKHFSVNAMLNKESVKQRIDRDDVGISFTEFAYTLLQSYDFAELNKR 187

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKE 250
           +   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  GA+WLN +
Sbjct: 188 HGAMLQIGGSDQWGNITNGIDLTRRLNQKQVFGLTLPLVTKSDGTKFGKTEGGAVWLNAK 247

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM-AKLQGKEIN-EAKKIIATEITT 308
            TSPY F+Q+W  + DADV  F K  T LP+ EI  + AK Q      EA++I+A E+T 
Sbjct: 248 KTSPYQFYQFWLKVADADVYKFLKYFTFLPIEEIGAIEAKDQASGTKPEAQRILAEEMTR 307

Query: 309 MVHGREEAEKAATAAMECFDMSIHS-------QHMPTISISKDEVSRGMGLLTLIVKAGF 361
           ++HG E A +AA    E       S       + +    +   EVS  + ++  +VK G 
Sbjct: 308 LIHG-ETALQAAQRITESLFAEDQSSLTESDFEQLALDGLPAFEVSGSLNVVEALVKTGL 366

Query: 362 ATSTNEARRHLKSNAIKIN 380
           A+S  EAR  + S A+ +N
Sbjct: 367 ASSNKEARGFVNSKAVLLN 385


>gi|298370331|ref|ZP_06981647.1| tyrosine--tRNA ligase [Neisseria sp. oral taxon 014 str. F0314]
 gi|298281791|gb|EFI23280.1| tyrosine--tRNA ligase [Neisseria sp. oral taxon 014 str. F0314]
          Length = 432

 Score =  289 bits (739), Expect = 7e-76,   Method: Compositional matrix adjust.
 Identities = 157/380 (41%), Positives = 222/380 (58%), Gaps = 14/380 (3%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I Q ++   LD L ++  +  Y G+D TA SLH GHL  ++ L   Q+ GH PI
Sbjct: 8   LQSRGLIAQTTDIEALDALLNEQKIALYCGFDPTADSLHIGHLLPVLALRRFQQAGHTPI 67

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+   R +  ++ +   +E I+     F+ +  G+  A+M NN  W
Sbjct: 68  ALVGGATGMIGDPSFKAVERSLNSAETVAGWVESIRNQLKPFLSF-EGENAAIMANNADW 126

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYDFVELAKN 190
             S+  +D LR+IG  FSVN ML+ ESV+ R++R+   +SF EF Y +LQ YDF EL K 
Sbjct: 127 FGSMNCLDFLRDIGKHFSVNAMLNKESVKQRIERDDVGISFTEFAYSLLQGYDFAELNKR 186

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKE 250
           +   L++GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  GA+WLN +
Sbjct: 187 HGAVLEIGGSDQWGNITAGIDLTRRLNQKQVFGLTLPLVTKSDGTKFGKTEGGAVWLNAK 246

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKIIATEIT 307
            TSPY F+Q+W  + DADV  F K  T L + EID +    K  G +  EA++I+A E+T
Sbjct: 247 KTSPYQFYQFWLKVADADVYKFLKYFTFLSIEEIDAIEAKDKASGTK-PEAQRILAEEMT 305

Query: 308 TMVHGREEAEKAATAAMECFDMSIHS-------QHMPTISISKDEVSRGMGLLTLIVKAG 360
            ++HG E A +AA    E       S       + +    +   EVS G  ++  +VK G
Sbjct: 306 RLIHG-EAALQAAQRISESLFAEDQSHLTESDFEQLALDGLPAFEVSDGFNVVEALVKTG 364

Query: 361 FATSTNEARRHLKSNAIKIN 380
            A+S  EAR  + S A+ +N
Sbjct: 365 LASSNKEARGFVNSKAVLLN 384


>gi|51598626|ref|YP_072814.1| tyrosyl-tRNA synthetase [Borrelia garinii PBi]
 gi|81610041|sp|Q661P9|SYY_BORGA RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|51573197|gb|AAU07222.1| tyrosyl-tRNA synthetase [Borrelia garinii PBi]
          Length = 405

 Score =  289 bits (739), Expect = 7e-76,   Method: Compositional matrix adjust.
 Identities = 155/401 (38%), Positives = 238/401 (59%), Gaps = 7/401 (1%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L++L +RGF+ Q ++ + L  L  +  +  Y G D T+SSLH GHL   + +  L++ GH
Sbjct: 5   LNLLYKRGFLKQCTSLKVLSDLMDREKIVFYAGVDTTSSSLHIGHLIPFLAMMHLRQHGH 64

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
            PI L+G  T+ IGDPS + E R+++ S+ I  N   IK       ++ +    +  ++N
Sbjct: 65  MPIVLIGDSTTKIGDPSGKSEMRKILSSEVINNNALSIKNQLQKITRFSS----SCFIHN 120

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL ++ YI+ LR+IG  FSVNRMLSFE+ + RL  +  LSF+EFNY +LQ+YD+  L 
Sbjct: 121 SNWLDNLNYIEFLRDIGIHFSVNRMLSFETYKRRL--DFGLSFIEFNYQLLQSYDYYMLN 178

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
           K  +C+LQ+GG DQWGNI+ G+DL  R    + F LT PL+T + G KMGK+  GA++L+
Sbjct: 179 KIKNCKLQIGGDDQWGNIVSGVDLIRRKMGVEAFGLTFPLITRSDGKKMGKSEKGAVYLD 238

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITT 308
             + S Y+F+QY+RN  D+DV +F    T L   EI+ ++  +G  +N+AK+I+A EIT 
Sbjct: 239 SSLYSIYDFYQYFRNTSDSDVKTFLYLFTFLEEDEIESISNFKGNSLNKAKEILAFEITK 298

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
           +VHG  EA K   A+   F  S    ++P    S   +   + L+ L++ +    S +E 
Sbjct: 299 IVHGEVEALKVQEASFAAFRGSGDRSNIPFFKFSFSGLEEEILLIDLMLDSKIVPSKSEG 358

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
           RR + S  + IN   + N+   I  +DF++   I+L  GKK
Sbjct: 359 RRLINSGGVYINGKRVENQNHCITREDFNNN-EIELRVGKK 398


>gi|296269994|ref|YP_003652626.1| tyrosyl-tRNA synthetase [Thermobispora bispora DSM 43833]
 gi|296092781|gb|ADG88733.1| tyrosyl-tRNA synthetase [Thermobispora bispora DSM 43833]
          Length = 421

 Score =  289 bits (739), Expect = 7e-76,   Method: Compositional matrix adjust.
 Identities = 155/414 (37%), Positives = 230/414 (55%), Gaps = 10/414 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +D L  L  R  + Q ++   L    ++G ++ Y G+D TA SLH G+L  L++L   Q+
Sbjct: 2   TDILDELHWRDIVAQTTDANALRKALAEGPISVYAGFDPTAPSLHVGNLATLLILTRFQR 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+PI L+GG T +IGDPS R   R +   + + E + +I+     F+ +  G   AL+
Sbjct: 62  AGHRPIGLVGGATGLIGDPSGRSTERALNPVEVVAEWVTRIRAQVEKFLSFDEGPNSALL 121

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           ++N  W   +  ID LR+IG  F VNRML+ ESV +RL+ E  LS+ EF+Y ILQA D++
Sbjct: 122 VSNLEWTEKLSVIDFLRDIGKHFPVNRMLARESVAARLEGE-GLSYTEFSYQILQANDYL 180

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           EL + Y C LQ+GGSDQWGNI  G+DL  R++   +  LT  L+T A GTK GKT  GAI
Sbjct: 181 ELYRRYGCTLQVGGSDQWGNITAGVDLIRRVEGAHVHGLTGKLITKADGTKFGKTAGGAI 240

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE--INEAKKIIA 303
           WL+  +TSPY F+Q+W N DD DVV   K  T     EI+ + K   +     EA++ +A
Sbjct: 241 WLDPALTSPYAFYQFWLNADDRDVVRLLKVFTFRTREEIEELEKAVAERPAAREAQRALA 300

Query: 304 TEITTMVHGREEAEKAATAAMECFDM-SIHSQHMPTISISKDEVSR------GMGLLTLI 356
            ++T +VHGREE E+   A+   F   ++      T+  + +EV +      G   + L+
Sbjct: 301 EDVTALVHGREELERVVAASRALFGHGTLQELDERTLEAALNEVPKAKVPALGAPYVDLL 360

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
             +G   S + ARR ++     +NN  +++E       D      + L  GKK 
Sbjct: 361 AASGIVESKSAARRAVREGGAYLNNVKVTDEDYVPTADDLLHGRFLVLRRGKKT 414


>gi|188533925|ref|YP_001907722.1| tyrosyl-tRNA synthetase [Erwinia tasmaniensis Et1/99]
 gi|254783606|sp|B2VEN3|SYY_ERWT9 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|188028967|emb|CAO96833.1| Tyrosyl-tRNA synthetase [Erwinia tasmaniensis Et1/99]
          Length = 425

 Score =  289 bits (739), Expect = 7e-76,   Method: Compositional matrix adjust.
 Identities = 162/421 (38%), Positives = 236/421 (56%), Gaps = 21/421 (4%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q 
Sbjct: 4   SNLIKQLQERGLVAQVTDENALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQD 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++  S+ + + +EKI+   + F+ +  G   A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTSETVNQWVEKIRQQVAPFLSFNCGDNSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDF 184
            NN  W  S+  +  LR+IG  FSVN+M++ E+V+ RL R+ Q +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGSMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDQGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L + Y   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  GA
Sbjct: 184 ACLNERYGVALQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKSDGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKI 301
           +WL+   TSPY F+Q+W N  DADV  F K  T + + EI+++    K  GK    A+ +
Sbjct: 244 VWLDAAKTSPYKFYQFWINTADADVYRFLKFFTFMSLEEINQLEEEDKSSGK-APRAQGV 302

Query: 302 IATEITTMVHGREEAEKAATAAMECF----------DMSIHSQH-MPTISISKDEVSRGM 350
           +A  +T +VHG E    A       F          D+S  +Q  MP I     E+  G 
Sbjct: 303 LAELVTRLVHGEEGLIAAQRITRSLFAGNVTELTANDLSQLAQDGMPGI-----ELKIGQ 357

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            L   +V A  A S  +AR+ +++ ++ IN S+ ++ +      D        L  GKKN
Sbjct: 358 DLQQALVNAELAPSRGQARKLIEAKSVSINGSLQTDAEYTFGEDDRLFGQYTLLRRGKKN 417

Query: 411 H 411
           +
Sbjct: 418 Y 418


>gi|238796382|ref|ZP_04639891.1| Tyrosyl-tRNA synthetase [Yersinia mollaretii ATCC 43969]
 gi|238719827|gb|EEQ11634.1| Tyrosyl-tRNA synthetase [Yersinia mollaretii ATCC 43969]
          Length = 428

 Score =  288 bits (738), Expect = 8e-76,   Method: Compositional matrix adjust.
 Identities = 158/390 (40%), Positives = 226/390 (57%), Gaps = 21/390 (5%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG ++ Y G+D TA SLH GHL  L+ L   Q 
Sbjct: 8   SNLIKQLQERGLVAQVTDEDALAERLAQGPISLYCGFDPTADSLHLGHLVPLLCLKRFQL 67

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+P++L+GG T +IGDPSF+   R++     + E +EKI+   S F+ +  G+  A+ 
Sbjct: 68  AGHRPVALVGGATGMIGDPSFKASERKLNTEDTVNEWVEKIRRQVSPFLDFDCGENSAIA 127

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQS-LSFLEFNYMILQAYDF 184
            NN  W   +  +  LR+IG  FSVN+M++ E+V+ RL R+ S +SF EF+Y +LQAYDF
Sbjct: 128 ANNYDWFGGMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDSGISFTEFSYNLLQAYDF 187

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K +   LQ+GGSDQWGNI  GIDL  RL   +++ LT PL+T A GTK GKT  GA
Sbjct: 188 ACLNKAHGVALQIGGSDQWGNITSGIDLTRRLHQQQVYGLTVPLITKADGTKFGKTEGGA 247

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+ +    K  GK    A+ +
Sbjct: 248 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSLEEINALEEEDKNSGK-APRAQYV 306

Query: 302 IATEITTMVHGRE--EAEKAATAAMECFDMS---------IHSQHMPTISISKDEVSRGM 350
           +A  +T MVHG E   A K  T ++   D++         +    MPTI     E++R  
Sbjct: 307 LAENVTGMVHGAEGLAAAKRITDSLFSGDLNEMTEADFAQLAQDGMPTI-----ELTRDA 361

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKIN 380
            L   +V A    S  +AR  + SNA+ IN
Sbjct: 362 DLQQALVNAELVPSRGQARTMINSNAVAIN 391


>gi|329118944|ref|ZP_08247639.1| tyrosine--tRNA ligase [Neisseria bacilliformis ATCC BAA-1200]
 gi|327464972|gb|EGF11262.1| tyrosine--tRNA ligase [Neisseria bacilliformis ATCC BAA-1200]
          Length = 432

 Score =  288 bits (738), Expect = 8e-76,   Method: Compositional matrix adjust.
 Identities = 156/379 (41%), Positives = 221/379 (58%), Gaps = 12/379 (3%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I Q ++   LD   ++  ++ Y G+D TA SLH GHL  ++ L   Q+ GH PI
Sbjct: 8   LQSRGLIAQTTDIAALDAFLTENKISLYCGFDPTADSLHIGHLLPVLALRRFQQAGHTPI 67

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+   R +   + +   +  I+     F+ +  G+  A+M NN  W
Sbjct: 68  ALVGGATGMIGDPSFKAVERSLNTPETVAGWVASIRAQLEPFLSF-EGENAAIMANNADW 126

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYDFVELAKN 190
              +  +D LR+IG  FSVN ML+ ESV+ R+ R+   +SF EF Y +LQ+YDF EL K 
Sbjct: 127 FGGMNCLDFLRDIGKHFSVNAMLNKESVKQRIDRDDVGISFTEFAYTLLQSYDFAELNKR 186

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKE 250
           +   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  GA+WLN +
Sbjct: 187 HGATLQIGGSDQWGNITNGIDLTRRLNQKQVFGLTLPLVTKSDGTKFGKTEGGAVWLNAK 246

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM-AKLQGKEIN-EAKKIIATEITT 308
            TSPY F+Q+W  + DADV  F K  T L ++EID + AK Q      EA++++A E+T 
Sbjct: 247 KTSPYQFYQFWLKVADADVYKFLKYFTFLSVAEIDAIEAKDQASGAKPEAQRVLAEEMTR 306

Query: 309 MVHGREEAEKAATAAMECFDMSIHS-------QHMPTISISKDEVSRGMGLLTLIVKAGF 361
           ++HG EEA +AA    E       S       + +    +   EVS G+ ++  +VK G 
Sbjct: 307 LIHG-EEALQAAQRISESLFAEDQSSLTESDFEQLALDGLPAFEVSDGLNVVEALVKTGL 365

Query: 362 ATSTNEARRHLKSNAIKIN 380
           A S  EAR  + S A+ +N
Sbjct: 366 AQSNKEARGFVNSKAVLLN 384


>gi|317047943|ref|YP_004115591.1| tyrosyl-tRNA synthetase [Pantoea sp. At-9b]
 gi|316949560|gb|ADU69035.1| tyrosyl-tRNA synthetase [Pantoea sp. At-9b]
          Length = 424

 Score =  288 bits (738), Expect = 8e-76,   Method: Compositional matrix adjust.
 Identities = 157/405 (38%), Positives = 229/405 (56%), Gaps = 21/405 (5%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG I Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q 
Sbjct: 4   SNLIQQLQERGLIAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQD 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++  ++ + E +EKI+   + F+ +  G   A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTTETVGEWVEKIRHQVAPFLSFDCGDNSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDF 184
            NN  W   +  +  LR+IG  FSVN+M++ E+V+ RL RE Q +S+ EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGGMNVLTFLRDIGKHFSVNQMINKEAVKQRLNREDQGISYTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
            EL K Y   LQ+GGSDQWGNI  GIDL  RL   + + LT PL+T + GTK GKT  GA
Sbjct: 184 AELNKRYGVVLQIGGSDQWGNITSGIDLTRRLHQQQTWGLTVPLITKSDGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK---I 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+ + + Q K    A +   +
Sbjct: 244 VWLDAKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINALEE-QDKNSGTAPRAQYV 302

Query: 302 IATEITTMVHGREEAEKAATAAMECF-----DMS------IHSQHMPTISISKDEVSRGM 350
           +A ++T +VHG      A       F     DM+      +    MPTI++S ++     
Sbjct: 303 LAEQVTRLVHGEAGLTAAKRITESLFSGSLSDMTEADFEQLAQDGMPTINLSAED----- 357

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
            L   +VKA    S  +AR  + SNA+ +N    S+ + +    D
Sbjct: 358 DLQQALVKAELVPSRGQARTMIGSNAVSLNGEKQSDAEYRFSDSD 402


>gi|310767575|gb|ADP12525.1| tyrosyl-tRNA synthetase [Erwinia sp. Ejp617]
          Length = 424

 Score =  288 bits (738), Expect = 9e-76,   Method: Compositional matrix adjust.
 Identities = 159/416 (38%), Positives = 236/416 (56%), Gaps = 11/416 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q 
Sbjct: 4   SNLIKQLQERGLVAQVTDENALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQD 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++  S+ + + +EKI+   + F+ +  G   AL 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTSETVNDWVEKIRQQVAPFLDFSCGDNSALA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDF 184
            NN  W  S+  +  LR+IG  FSVN+M++ E+V+ RL R +Q +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGSMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDQGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L + +   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  GA
Sbjct: 184 ACLNERHGVALQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKSDGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + +I+ +    K  GK    A+ +
Sbjct: 244 VWLDAKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEDINTLEQEDKNSGK-APRAQIV 302

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS-ISKD-----EVSRGMGLLTL 355
           +A  +T +VHG E    A       F  S+       ++ +++D     E+  G+ L   
Sbjct: 303 LAELVTRLVHGEEGLTAAQRITQSLFAGSVTELTAHDLAQLAQDGMPGVELEAGLDLQQA 362

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           +V A  A S  +AR+ + + +I IN S+ +N +      D        L  GKKN+
Sbjct: 363 LVNAELAPSRGQARKLIDAKSISINGSLQTNAEYAFAEDDRLFGQYTLLRRGKKNY 418


>gi|228469994|ref|ZP_04054910.1| tyrosyl-tRNA synthetase [Porphyromonas uenonis 60-3]
 gi|228308375|gb|EEK17213.1| tyrosyl-tRNA synthetase [Porphyromonas uenonis 60-3]
          Length = 436

 Score =  288 bits (738), Expect = 9e-76,   Method: Compositional matrix adjust.
 Identities = 156/430 (36%), Positives = 244/430 (56%), Gaps = 24/430 (5%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S  +S L  RG IH I    E  +  ++ + TAY+G+D TA SLH GHL  +M+L  LQ+
Sbjct: 4   SSLISELKARGMIHNIMPGTEEQL--TEHLTTAYVGFDPTADSLHIGHLVGVMMLRHLQR 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD-AL 124
            GHKPI+L+GG T +IGDPS + + R ++    ++ N E I      F+ + +   + AL
Sbjct: 62  AGHKPIALLGGATGMIGDPSMKSQERNLLDMDTLRHNQECIGRQLGHFLDFESDAPNKAL 121

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR--EQSLSFLEFNYMILQAY 182
           +LNN  W+    +++ +R+IG   +VN M++ +SV+ RL+   E  LSF EF+Y +LQ Y
Sbjct: 122 LLNNYDWMKDYSFLNFIRDIGKHITVNYMMAKDSVKRRLEANAEAGLSFTEFSYQLLQGY 181

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           D++ L + Y CR+QMGGSDQWGNI  G +L  R+   + F +T PL+  A GTK GKT  
Sbjct: 182 DYLHLYREYGCRVQMGGSDQWGNITTGTELIRRIDGGEAFGVTCPLIKKADGTKFGKTEK 241

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEA--KK 300
           G +WL++  TSPY F Q+W N+ D D   F K  T++P+ EID + +   +  +E   + 
Sbjct: 242 GNVWLDRRYTSPYTFCQFWLNVSDEDAERFVKIFTSIPLEEIDSLIERHRQAPHERLLQH 301

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQ--------------HMPTISISKD-- 344
            +A E+T MVHGRE+ E++ +A    F  + H Q               +P  ++ +   
Sbjct: 302 TLAEELTVMVHGREDYEQSMSAGQILFGNNTHDQLRQMPEELLEEVMAGVPHYNVGRTLL 361

Query: 345 EVSRGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
           E + G+ LL L+V+ A    S  E R+ + SN I +N   ++++   +   D  +   + 
Sbjct: 362 EQAGGVKLLDLLVEHAPIFKSKGELRKLIDSNGISLNKEKVADQDCVVTTDDLIAGRYLL 421

Query: 404 LSFGKKNHII 413
           +  GKKN+ +
Sbjct: 422 VQRGKKNYYL 431


>gi|238757716|ref|ZP_04618899.1| Tyrosyl-tRNA synthetase [Yersinia aldovae ATCC 35236]
 gi|238703959|gb|EEP96493.1| Tyrosyl-tRNA synthetase [Yersinia aldovae ATCC 35236]
          Length = 428

 Score =  288 bits (738), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 157/390 (40%), Positives = 226/390 (57%), Gaps = 21/390 (5%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG ++ Y G+D TA SLH GHL  L+ L   Q 
Sbjct: 8   SNLIKQLQERGLVAQVTDEDALAERLAQGPISLYCGFDPTADSLHLGHLVPLLCLKRFQL 67

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+P++L+GG T +IGDPSF+   R++     + E +EKI+   S F+ +  G   A+ 
Sbjct: 68  AGHRPVALVGGATGMIGDPSFKASERKLNTEDTVNEWVEKIRRQVSPFLDFDCGDNSAIA 127

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQS-LSFLEFNYMILQAYDF 184
            NN  W   +  +  LR+IG  FSVN+M++ E+V+ RL R+ S +SF EF+Y +LQAYDF
Sbjct: 128 ANNYDWFGGMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDSGISFTEFSYNLLQAYDF 187

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K +   LQ+GGSDQWGNI  GIDL  RL   +++ LT PL+T A GTK GKT  GA
Sbjct: 188 ACLNKAHGVALQIGGSDQWGNITSGIDLTRRLHQQQVYGLTVPLITKADGTKFGKTEGGA 247

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+ +    K  GK    A+ +
Sbjct: 248 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSLEEINALEDEDKNSGK-APRAQYV 306

Query: 302 IATEITTMVHGRE--EAEKAATAAMECFDMS---------IHSQHMPTISISKDEVSRGM 350
           +A  +T MVHG +   A K  TA++   D++         +    MPT+     E+SR  
Sbjct: 307 LAENVTGMVHGVDGLAAAKRITASLFSGDLNEMTEADFAQLAQDGMPTV-----ELSRDA 361

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKIN 380
            L   +V A    S  +AR  + SNA+ +N
Sbjct: 362 DLQQALVNAELVPSRGQARTMISSNAVALN 391


>gi|195941280|ref|ZP_03086662.1| tyrosyl-tRNA synthetase (tyrS) [Borrelia burgdorferi 80a]
          Length = 405

 Score =  288 bits (737), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 155/401 (38%), Positives = 237/401 (59%), Gaps = 7/401 (1%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           LS+L +RGF+ Q ++ + L  L  +  +  Y G D T+SSLH GHL   + +  L++ GH
Sbjct: 5   LSLLHKRGFLKQCTSLKVLSDLMDREKIVFYAGVDATSSSLHIGHLIPFLAMMHLRQHGH 64

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
            PI L+G  T+ IGDPS + E R+++ S+EI  N   IK       K+    T    ++N
Sbjct: 65  MPIVLIGDSTAKIGDPSGKSEMRKILSSEEIGNNALLIKNQLQRITKF----TSECFIHN 120

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL ++ YI+ LR++G  FSVNRMLSFE+ + R+  +  LSF+EFNY +LQ+YD+  L 
Sbjct: 121 SNWLDNLNYIEFLRDVGMHFSVNRMLSFETYKRRM--DFGLSFIEFNYQLLQSYDYYMLN 178

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
           K  +CRLQ+GG DQWGNII G+DL  +    + F LT PL+T + G KMGK+  GA++L+
Sbjct: 179 KIKNCRLQIGGDDQWGNIISGVDLIRKKNGSETFGLTFPLITRSDGKKMGKSEKGAVYLD 238

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITT 308
             + S Y+F+QY+RN  D+DV +F    T L   EI+ ++  +G  +N+AK+I+A EIT 
Sbjct: 239 SNLFSIYDFYQYFRNTSDSDVKTFLYLFTFLEEDEIELISNFKGNSLNKAKEILAFEITK 298

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
           +VHG  EA K   A+   F  S    ++P    S       + L+ L++ +    S +E 
Sbjct: 299 IVHGEAEALKVQEASFAAFRGSGDRSNIPFFKFSFSSPKEEILLVDLMLDSKIVPSKSEG 358

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
           RR + S  + IN   + ++   +  +DF++   ++L  GKK
Sbjct: 359 RRLIDSGGVYINGKRVESQSHLLTKKDFNNN-EVELRVGKK 398


>gi|296315348|ref|ZP_06865289.1| tyrosine--tRNA ligase [Neisseria polysaccharea ATCC 43768]
 gi|296837696|gb|EFH21634.1| tyrosine--tRNA ligase [Neisseria polysaccharea ATCC 43768]
          Length = 431

 Score =  288 bits (737), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 156/380 (41%), Positives = 223/380 (58%), Gaps = 14/380 (3%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I Q ++   LD L ++  +  Y G+D TA SLH GHL  ++ L   Q+ GH PI
Sbjct: 7   LQSRGLIAQTTDIEALDALLNEQKIALYCGFDPTADSLHIGHLLPVLALRRFQQAGHTPI 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+   R +  ++ +   +E I+   + F+ +  G   A+M NN  W
Sbjct: 67  ALVGGATGMIGDPSFKAAERSLNSAETVAGWVESIRNQLTPFLSFEGGNA-AIMANNADW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQS-LSFLEFNYMILQAYDFVELAKN 190
              +  +D LR+IG  FSVN ML+ ESV+ R+ R+ + +SF EF Y +LQ YDF EL K 
Sbjct: 126 FGKMNCLDFLRDIGKHFSVNAMLNKESVKQRIDRDGAGISFTEFAYSLLQGYDFAELNKR 185

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKE 250
           +   L++GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  GA+WLN +
Sbjct: 186 HGAVLEIGGSDQWGNITAGIDLTRRLHQKQVFGLTLPLVTKSDGTKFGKTEGGAVWLNAK 245

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKIIATEIT 307
            TSPY F+Q+W  + DADV  F K  T L + EID +    K  G +  EA++I+A E+T
Sbjct: 246 KTSPYQFYQFWLKVADADVYKFLKYFTFLSVEEIDAIEAKDKASGSK-PEAQRILAEEMT 304

Query: 308 TMVHGREEAEKAATAAMECFDMSIHS-------QHMPTISISKDEVSRGMGLLTLIVKAG 360
            ++HG E A +AA    E       S       + +    +   EVS G+ ++ ++VK G
Sbjct: 305 RLIHG-EAALQAAQRISESLFAEDQSSLTESDFEQLALDGLPAFEVSDGINVVEVLVKTG 363

Query: 361 FATSTNEARRHLKSNAIKIN 380
            A+S  EAR  + S A+ +N
Sbjct: 364 LASSNKEARGFVNSKAVLLN 383


>gi|325201519|gb|ADY96973.1| tyrosyl-tRNA synthetase [Neisseria meningitidis M01-240149]
 gi|325207498|gb|ADZ02950.1| tyrosyl-tRNA synthetase [Neisseria meningitidis NZ-05/33]
          Length = 431

 Score =  288 bits (737), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 157/380 (41%), Positives = 222/380 (58%), Gaps = 14/380 (3%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R  I Q ++   LD L ++  +  Y G+D TA SLH GHL  ++ L   Q+ GH PI
Sbjct: 7   LQSRDLIAQTTDIEALDALLNEQKIALYCGFDPTADSLHIGHLLPVLALRRFQQAGHTPI 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+   R +  ++ +   +E I+   + F+ +  G   A+M NN  W
Sbjct: 67  ALVGGATGMIGDPSFKAAERSLNSAETVAGWVESIRNQLTPFLSFEGGNA-AIMANNADW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQS-LSFLEFNYMILQAYDFVELAKN 190
             S+  +D LR+IG  FSVN ML+ ESV+ R+ R+ + +SF EF Y +LQ YDF EL K 
Sbjct: 126 FGSMNCLDFLRDIGKHFSVNAMLNKESVKQRIDRDGAGISFTEFAYSLLQGYDFAELNKR 185

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKE 250
           +   L++GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  GA+WLN +
Sbjct: 186 HGAVLEIGGSDQWGNITAGIDLTRRLNQKQVFGLTLPLVTKSDGTKFGKTEGGAVWLNAK 245

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKIIATEIT 307
            TSPY F+Q+W  + DADV  F K  T L + EID +    K  G +  EA++I+A E+T
Sbjct: 246 KTSPYQFYQFWLKVADADVYKFLKYFTFLSIEEIDAVEAKDKASGSK-PEAQRILAEEMT 304

Query: 308 TMVHGREEAEKAATAAMECFDMSIHS-------QHMPTISISKDEVSRGMGLLTLIVKAG 360
            ++HG EEA  AA    E       S       + +    +   EVS G+ ++  +VK G
Sbjct: 305 RLIHG-EEALAAAQRISESLFAEDQSSLTESDFEQLALDGLPAFEVSDGINVVEALVKTG 363

Query: 361 FATSTNEARRHLKSNAIKIN 380
            A+S  EAR  + S A+ +N
Sbjct: 364 LASSNKEARGFVNSKAVLLN 383


>gi|27904618|ref|NP_777744.1| tyrosyl-tRNA synthetase [Buchnera aphidicola str. Bp (Baizongia
           pistaciae)]
 gi|34098363|sp|Q89AW3|SYY_BUCBP RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|27904015|gb|AAO26849.1| tyrosyl-tRNA synthetase [Buchnera aphidicola str. Bp (Baizongia
           pistaciae)]
          Length = 424

 Score =  288 bits (737), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 163/419 (38%), Positives = 234/419 (55%), Gaps = 20/419 (4%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
             +R  I QI+N  +L  +     ++ Y G+D+TA SLH GH+  L+ L   Q  GH+P+
Sbjct: 10  FQDRNLISQITNEIDLKNILLHNKISLYCGFDITADSLHVGHILPLLCLRRFQNLGHRPV 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            LMGGGTS+IGDPSF+   R++   + +    +KI    S F+K+  GK +AL+++N  W
Sbjct: 70  ILMGGGTSLIGDPSFKLLERQLNSIELVHTWKQKITKQLSLFLKFNVGKNNALIVDNYEW 129

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDFVELAKN 190
             +I  +  LR+IG  FS+N+M+  ++++ R+KR +Q +SF EF+Y +LQAYDF  L K 
Sbjct: 130 FKNINVLTFLRDIGKHFSINQMIVRDAIQRRIKRLDQGISFTEFSYNLLQAYDFYFLNKQ 189

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKE 250
            D  LQ+GGSDQWGNII GIDL  RL   + + +T PLLT   G K GKT    IWL+K 
Sbjct: 190 LDVILQIGGSDQWGNIISGIDLIRRLHKKRAYGITVPLLTKKDGRKFGKTELDTIWLDKM 249

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK-LQGKEINEAKKIIATEITTM 309
            TSPY F+QYW NI D+D+ SF K  T L +SEI  +    +  E+N  KKI+A  +T +
Sbjct: 250 KTSPYKFYQYWMNISDSDIYSFLKMFTFLSLSEIKALKDTTKPTELNSVKKILAEYLTNL 309

Query: 310 VHGREEAEKAATAAMECFD-----------MSIHSQHMPTISISKDEVSRGMGLLTLIVK 358
           VHG  E           F              +    MP++     ++     L  L+V 
Sbjct: 310 VHGSNEVRAIQRITSSLFSGKFSEMKETDFFQLEQDGMPSV-----QLYNSGNLQQLLVY 364

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           +  A S + A+  + SN+++INN I +N    +  +D        LS GKKN   C LC
Sbjct: 365 SRLALSRSHAKSMIVSNSVRINNIIQNNPFYILCNRDKMYHKYTLLSRGKKN--FCLLC 421


>gi|224533693|ref|ZP_03674281.1| tyrosyl-tRNA synthetase [Borrelia burgdorferi CA-11.2a]
 gi|226320413|ref|ZP_03795980.1| tyrosyl-tRNA synthetase [Borrelia burgdorferi 29805]
 gi|224512986|gb|EEF83349.1| tyrosyl-tRNA synthetase [Borrelia burgdorferi CA-11.2a]
 gi|226234166|gb|EEH32880.1| tyrosyl-tRNA synthetase [Borrelia burgdorferi 29805]
          Length = 405

 Score =  288 bits (737), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 155/401 (38%), Positives = 237/401 (59%), Gaps = 7/401 (1%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           LS+L +RGF+ Q ++ + L  L  +  +  Y G D T+SSLH GHL   + +  L++ GH
Sbjct: 5   LSLLHKRGFLKQCTSLKVLSDLMDREKIVFYAGVDATSSSLHIGHLIPFLAMMHLRQHGH 64

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
            PI L+G  T+ IGDPS + E R+++ S+EI  N   IK       K+    T    ++N
Sbjct: 65  MPIVLIGDSTAKIGDPSGKSEMRKILSSEEIGNNALLIKNQLQRITKF----TSECFIHN 120

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL ++ YI+ LR++G  FSVNRMLSFE+ + R+  +  LSF+EFNY +LQ+YD+  L 
Sbjct: 121 SNWLDNLNYIEFLRDVGMHFSVNRMLSFETYKRRM--DFGLSFIEFNYQLLQSYDYYMLN 178

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
           K  +CRLQ+GG DQWGNII G+DL  +    + F LT PL+T + G KMGK+  GA++L+
Sbjct: 179 KIKNCRLQIGGDDQWGNIISGVDLIRKKNGSETFGLTFPLITRSDGKKMGKSEKGAVYLD 238

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITT 308
             + S Y+F+QY+RN  D+DV +F    T L   EI+ ++  +G  +N+AK+I+A EIT 
Sbjct: 239 SNLFSIYDFYQYFRNTSDSDVKTFLYLFTFLEEDEIELISNFKGNSLNKAKEILAFEITK 298

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
           +VHG  EA K   A+   F  S    ++P    S       + L+ L++ +    S +E 
Sbjct: 299 IVHGEAEALKVQGASFAAFRGSGDRSNIPFFKFSFSSPKEEILLVDLMLDSKIVPSKSEG 358

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
           RR + S  + IN   + ++   +  +DF++   ++L  GKK
Sbjct: 359 RRLIDSGGVYINGKRVESQSHLLTKKDFNNN-EVELRVGKK 398


>gi|251789337|ref|YP_003004058.1| tyrosyl-tRNA synthetase [Dickeya zeae Ech1591]
 gi|247537958|gb|ACT06579.1| tyrosyl-tRNA synthetase [Dickeya zeae Ech1591]
          Length = 424

 Score =  288 bits (737), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 161/424 (37%), Positives = 234/424 (55%), Gaps = 17/424 (4%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q 
Sbjct: 3   SNLIQQLQERGLVAQVTDEGALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQM 62

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++     +QE +EKI+   + F+ +  G   A+ 
Sbjct: 63  AGHKPVALVGGATGLIGDPSFKAAERKLNTEDTVQEWVEKIRRQVAPFLDFDCGDNSAVA 122

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYDF 184
            NN  W  S+  +  LR+IG  FSVN+M++ E+V+ RL R+   +SF EF+Y +LQ YDF
Sbjct: 123 ANNYDWFGSMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDVGISFTEFSYNLLQGYDF 182

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L   +   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT SGA
Sbjct: 183 ASLNALHGVELQIGGSDQWGNITSGIDLTRRLHQKQVFGLTVPLITKSDGTKFGKTESGA 242

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN-----EAK 299
           +WL+ + TSPY F+Q+W N  DADV  F K  T L   +ID +  L+ ++ N      A+
Sbjct: 243 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFL---DIDVINALEEEDKNSGVAPRAQ 299

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLL 353
            ++A E+T +VHG E    A       F+ ++          +    +   E++ G  L 
Sbjct: 300 YVLAEEVTRLVHGEEGLVAAKRITQSLFNGNLSDLTEADFAQLAQDGVPMVELATGADLQ 359

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
             +V +    S  +AR+ + SNAI IN    S+ +      D        L  GKKN+  
Sbjct: 360 QALVDSELQPSRGQARKTIASNAITINGEKQSDPEYTFTDADRLFGCYTLLRRGKKNY-- 417

Query: 414 CHLC 417
           C +C
Sbjct: 418 CLVC 421


>gi|259908529|ref|YP_002648885.1| tyrosyl-tRNA synthetase [Erwinia pyrifoliae Ep1/96]
 gi|224964151|emb|CAX55658.1| Tyrosyl-tRNA synthetase [Erwinia pyrifoliae Ep1/96]
 gi|283478489|emb|CAY74405.1| tyrS [Erwinia pyrifoliae DSM 12163]
          Length = 424

 Score =  288 bits (737), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 159/416 (38%), Positives = 235/416 (56%), Gaps = 11/416 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q 
Sbjct: 4   SNLIKQLQERGLVAQVTDENALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQD 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++  S+ + + +EKI+   + F+ +  G   AL 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTSETVNDWVEKIRQQVAPFLDFNCGDNSALA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDF 184
            NN  W  S+  +  LR+IG  FSVN+M++ E+V+ RL R +Q +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGSMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDQGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L   +   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  GA
Sbjct: 184 ACLNDRHGVALQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKSDGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + +I+ +    K  GK    A+ +
Sbjct: 244 VWLDAKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEDINTLEQEDKNSGK-APRAQIV 302

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS-ISKD-----EVSRGMGLLTL 355
           +A  +T +VHG E    A       F  S+       ++ +++D     E+  G+ L   
Sbjct: 303 LAELVTRLVHGEEGLTAAQRITQSLFAGSVTELTAHDLAQLAQDGMPGVELEAGLDLQQA 362

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           +V A  A S  +AR+ + + +I IN S+ +N +      D        L  GKKN+
Sbjct: 363 LVNAELAPSRGQARKLIDAKSISINGSLQTNAEYAFAEDDRLFGQYTLLRRGKKNY 418


>gi|187918237|ref|YP_001883800.1| tyrosyl-tRNA synthetase [Borrelia hermsii DAH]
 gi|254783573|sp|B2S074|SYY_BORHD RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|119861085|gb|AAX16880.1| tyrosyl-tRNA synthetase [Borrelia hermsii DAH]
          Length = 406

 Score =  288 bits (737), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 161/402 (40%), Positives = 247/402 (61%), Gaps = 8/402 (1%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L IL +RGF+ Q +N   L +L  +  +  Y+G D T++SLH GHL   M +  LQ+ GH
Sbjct: 5   LGILEKRGFLKQCTNLEALSVLMDREKMVFYVGVDATSTSLHIGHLIPFMAMAHLQRQGH 64

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
            PI+L+GGGT+ IGDPS +D  R+++  ++I+ N++ IK      I +  G     +++N
Sbjct: 65  IPIALVGGGTTKIGDPSGKDVMRKILPKEDIEANVKAIKEQLLRIIDFSHG----YIIDN 120

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL +I YI+ LR+IG +FSVNRML FE+ + RLK    LSF+EFNY +LQ+YDF  L 
Sbjct: 121 SEWLDNINYIEFLRDIGVYFSVNRMLGFETYKRRLK--DGLSFIEFNYQLLQSYDFYMLN 178

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
           K  +C+LQ+GG DQWGNI+ G+DL +R    ++F LT PL+T + G KMGK+  GA++L+
Sbjct: 179 KLKNCKLQIGGDDQWGNIVSGVDLVKRKLGTEVFGLTLPLITRSDGKKMGKSEKGAVYLD 238

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITT 308
            ++ S Y+F+QY+RN+ D DV  F    T L   EI+ ++  QG  +N+AK+ +A EIT 
Sbjct: 239 SKLYSVYDFYQYFRNVPDLDVKKFLYLFTFLEDDEIEHISSFQGYLLNKAKETLAFEITK 298

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQ-HMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
           +VHG   A KA++AA   F      +  +P   ++   +   + L+ L+V +   +S +E
Sbjct: 299 IVHGESAALKASSAASAAFKGGEGDKSDIPFFKLALTSLEGTILLVDLMVSSKIVSSKSE 358

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
           ARR + S  + ++   I ++   +    F + G I+L  GKK
Sbjct: 359 ARRLISSGGVYVDKVRIGDQNYCLNKDSF-ANGAIELRIGKK 399


>gi|285808518|gb|ADC36041.1| putative tyrosyl-tRNA synthetase [uncultured bacterium 270]
          Length = 428

 Score =  288 bits (737), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 149/383 (38%), Positives = 228/383 (59%), Gaps = 20/383 (5%)

Query: 32  SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESR 91
           + G VTAYIG+D TASSLH G L  +M L  LQ+ GH PI+++GGGT +IGDPS + + R
Sbjct: 25  ATGRVTAYIGFDPTASSLHVGSLLTVMGLARLQRFGHAPIAIVGGGTGMIGDPSGKSQER 84

Query: 92  RMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVN 151
            ++ +++I  N+  I+     F+ + T  T A ++NN  WL +I  +  LR+ G  F+VN
Sbjct: 85  VLLSAEQIDANVVGIRAQLERFLDFDTPGTAARIVNNADWLATIDLVSFLRDAGKHFTVN 144

Query: 152 RMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGID 211
            M+  ESV  RL+ E  +SF EF+Y++LQAYDF++L   Y C LQMGG+DQWGNI  GID
Sbjct: 145 YMMQKESVSRRLESEDGISFTEFSYLVLQAYDFLQLFDRYGCTLQMGGTDQWGNITAGID 204

Query: 212 LGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVS 271
           L  +++  K   L  PL+ +ASG K GKT +G IWL+   T    F Q+W N DD DV++
Sbjct: 205 LIRKVRAKKAHGLVWPLMKSASGAKFGKTEAGTIWLDAARTPVQEFRQFWLNTDDRDVIA 264

Query: 272 FAKRLTTLPMSEIDRM-AKLQG-KEINEAKKIIATEITTMVHGREEAEKAATAAMECFDM 329
           + K  T L   E+D + A++Q   E   A++++A ++TT+VHGRE+A +A +A    F  
Sbjct: 265 YLKFFTFLTRDEVDDLEAQVQRVPEQRAAQQVLADQVTTLVHGREDAARAESANAVLFGA 324

Query: 330 SIH----------------SQHMPTISISKDEV-SRGMGLLTLIVKAGFATSTNEARRHL 372
           S                  +  +P+ SI+ DE    G+ ++ ++ +A    S +EARR +
Sbjct: 325 STTGGAVDAAQLADSLLAITGDVPSTSIAADEFEGDGLSVVDVVARA-TGGSKSEARRLV 383

Query: 373 KSNAIKINNSIISNEKLQIKLQD 395
           +   + +N+  I++   ++   D
Sbjct: 384 QQGGVSVNDHKIADANARLTRAD 406


>gi|329298922|ref|ZP_08256258.1| tyrosyl-tRNA synthetase [Plautia stali symbiont]
          Length = 424

 Score =  288 bits (736), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 157/405 (38%), Positives = 229/405 (56%), Gaps = 21/405 (5%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q 
Sbjct: 4   SNLIQQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQD 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++  ++ + E +EKI+   + F+ +  G   A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTTETVNEWVEKIRKQVAPFLDFDCGDNSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDF 184
            NN  W   +  +  LR+IG  FSVN+M++ E+V+ RL RE Q +S+ EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGCMNVLTFLRDIGKHFSVNQMINREAVKMRLNREDQGISYTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
            EL K YD  LQ+GGSDQWGNI  GIDL  RL   + + LT  L+T + GTK GKT  GA
Sbjct: 184 AELNKRYDVVLQIGGSDQWGNITSGIDLTRRLHQQQAWGLTVLLITKSDGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+ +    K  GK    A+ +
Sbjct: 244 VWLDAKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINALEEEDKNSGK-APRAQYV 302

Query: 302 IATEITTMVHGREEAEKAATAAMECF-----DMS------IHSQHMPTISISKDEVSRGM 350
           +A ++T +VHG+     A       F     DM+      +    MPTIS++ D+     
Sbjct: 303 LAEQVTRLVHGQSGLSAAKRITDSLFSGSLSDMTEADFEQLAQDGMPTISLNADD----- 357

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
            L   +V A    S  +AR  + SNA+ +N    S+ + +    D
Sbjct: 358 DLQQALVAAELVPSRGQARTMIGSNAVSVNGEKQSDAEYRFSDSD 402


>gi|332299494|ref|YP_004441415.1| Tyrosyl-tRNA synthetase [Porphyromonas asaccharolytica DSM 20707]
 gi|332176557|gb|AEE12247.1| Tyrosyl-tRNA synthetase [Porphyromonas asaccharolytica DSM 20707]
          Length = 436

 Score =  288 bits (736), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 154/430 (35%), Positives = 245/430 (56%), Gaps = 24/430 (5%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S  +S L  RG IH I    E  +  ++ + TAY+G+D TA SLH GHL  +M+L  LQ+
Sbjct: 4   SSLISELKARGMIHNIMPGTEEQL--TEHLTTAYVGFDPTADSLHIGHLVGVMMLRHLQR 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD-AL 124
            GH+PI+L+GG T +IGDPS + + R ++    ++ N E I      F+ + +   + AL
Sbjct: 62  AGHRPIALLGGATGMIGDPSMKSQERNLLDMDTLRHNQECIGRQLGHFLDFESDAPNKAL 121

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR--EQSLSFLEFNYMILQAY 182
           +LNN  W+    +++ +R+IG   +VN M++ +SV+ RL+   E  LSF EF+Y +LQ Y
Sbjct: 122 LLNNYDWMKDYSFLNFIRDIGKHITVNYMMAKDSVKRRLEANAEAGLSFTEFSYQLLQGY 181

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           D++ L + Y CR+QMGGSDQWGNI  G +L  R++  + F +T PL+  A GTK GKT  
Sbjct: 182 DYLHLYREYGCRVQMGGSDQWGNITTGTELIRRIEGGEAFGVTCPLIKKADGTKFGKTEQ 241

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEA--KK 300
           G +WL++  TSPY F Q+W N+ D D   F K  T++P+ EID + +   +  +E   + 
Sbjct: 242 GNVWLDRRYTSPYTFCQFWLNVSDEDAERFVKIFTSIPLEEIDSLIERHRQAPHERLLQH 301

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQ--------------HMPTISISKD-- 344
            +A ++T MVHGRE+ E++ +A    F  + H Q               +P  ++ +   
Sbjct: 302 TLAEQLTVMVHGREDYEQSMSAGQILFGNNTHDQLRQMSEELLKEVMAGVPNYNVGRTLL 361

Query: 345 EVSRGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
           E + G+ LL L+V+ A    S  E R+ + SN I +N   ++++   +   D  +   + 
Sbjct: 362 EQADGVKLLDLLVEHAPIFKSKGELRKLIASNGISLNKEKVADQDCVVTTDDLIAGKYLI 421

Query: 404 LSFGKKNHII 413
           +  GKKN+ +
Sbjct: 422 VQRGKKNYYL 431


>gi|261401574|ref|ZP_05987699.1| tyrosine--tRNA ligase [Neisseria lactamica ATCC 23970]
 gi|269208346|gb|EEZ74801.1| tyrosine--tRNA ligase [Neisseria lactamica ATCC 23970]
          Length = 431

 Score =  288 bits (736), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 156/380 (41%), Positives = 222/380 (58%), Gaps = 14/380 (3%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I Q ++   LD L ++  +  Y G+D TA SLH GHL  ++ L   Q+ GH PI
Sbjct: 7   LQSRGLIAQTTDIEALDALLNEQKIALYCGFDPTADSLHIGHLLPVLALRRFQQAGHTPI 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+   R +  ++ +   +E I+   + F+ +  G   A+M NN  W
Sbjct: 67  ALVGGATGMIGDPSFKAAERSLNSAETVAGWVESIRSQLTPFLSFEGGNA-AIMANNADW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQS-LSFLEFNYMILQAYDFVELAKN 190
              +  +D LR+IG  FSVN ML+ ESV+ R+ R+ + +SF EF Y +LQ YDF EL K 
Sbjct: 126 FGKMNCLDFLRDIGKHFSVNAMLNKESVKQRIDRDGAGISFTEFAYSLLQGYDFAELNKR 185

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKE 250
           +   L++GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  GA+WLN +
Sbjct: 186 HGAVLEIGGSDQWGNITAGIDLTRRLHQKQVFGLTLPLVTKSDGTKFGKTEGGAVWLNAK 245

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKIIATEIT 307
            TSPY F+Q+W  + DADV  F K  T L + EID +    K  G +  EA++I+A E+T
Sbjct: 246 KTSPYQFYQFWLKVADADVYKFLKYFTFLSVEEIDAVEAKDKASGSK-PEAQRILAEEMT 304

Query: 308 TMVHGREEAEKAATAAMECFDMSIHS-------QHMPTISISKDEVSRGMGLLTLIVKAG 360
            ++HG EEA  AA    E       S       + +    +   EVS G+ ++  +VK G
Sbjct: 305 RLIHG-EEALAAAQRISESLFAEDQSRLTESDFEQLALDGLPAFEVSDGINVVEALVKTG 363

Query: 361 FATSTNEARRHLKSNAIKIN 380
            A+S  EAR  + + A+ +N
Sbjct: 364 LASSNKEARGFVNAKAVLLN 383


>gi|260907482|ref|ZP_05915804.1| tyrosyl-tRNA synthetase [Brevibacterium linens BL2]
          Length = 428

 Score =  288 bits (736), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 155/420 (36%), Positives = 235/420 (55%), Gaps = 18/420 (4%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +D  S L  RG +   ++   L    ++  +T Y+G+D TA SLH G+L QL+    LQK
Sbjct: 2   TDIFSELKARGLVSVSTDEAALQKALNEESLTYYVGFDPTAPSLHMGNLVQLITAARLQK 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH P++L+GG T +IGDP    E R +   + ++E +EKI+     F+ + +G   A +
Sbjct: 62  AGHNPLALVGGATGLIGDPRMSGE-RTLNPREVVEEWLEKIRAQVEKFLDF-SGPNAAQV 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  W   +  ID LR+IG  F +NRML+ ESV +RL  E  +SF EF+Y +LQ  D++
Sbjct: 120 VNNYEWTSEMSAIDFLRDIGKHFPMNRMLAKESVSARLNSEAGISFTEFSYQVLQGNDYL 179

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           EL + Y C LQ GGSDQWGN+  G+DL  R++   + AL +PL+T A GTK GKT SG +
Sbjct: 180 ELHRRYGCSLQTGGSDQWGNLTSGVDLIRRVEQHSVHALATPLITKADGTKFGKTESGTV 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIA 303
           WL++ +TSPY F Q+W N DD DVV + K  +   + EI+++            A+K++A
Sbjct: 240 WLDESLTSPYAFSQFWLNADDRDVVKYLKVFSFRSLEEIEQIEAEFTAAPHTRLAQKVLA 299

Query: 304 TEITTMVHGREEAEKAATAAMECFD-----------MSIHSQHMPTISISKDEVSRGMGL 352
            ++TT+VHG+E+ E+A  AA   F            +   +  +P   +S  +++ G+ +
Sbjct: 300 EDVTTLVHGKEKYEQAIAAASALFGGGELASLDASTLGAATSELPRGDVSSAQLAEGVPV 359

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDST---GNIKLSFGKK 409
               V AG   S  EARR +K     +NN  ++ +   +   +   T   G I L  GKK
Sbjct: 360 ADAFVTAGIVKSKGEARRVIKDGGAYVNNVKVTGDDQTLTPTEVLPTEGGGVILLRRGKK 419


>gi|37526487|ref|NP_929831.1| tyrosyl-tRNA synthetase [Photorhabdus luminescens subsp. laumondii
           TTO1]
 gi|81419219|sp|Q7N3W6|SYY1_PHOLL RecName: Full=Tyrosyl-tRNA synthetase 1; AltName:
           Full=Tyrosine--tRNA ligase 1; Short=TyrRS 1
 gi|36785918|emb|CAE14970.1| tyrosine-tRNA synthetase (tyrosine--tRNA ligase) (TYRRS)
           [Photorhabdus luminescens subsp. laumondii TTO1]
          Length = 424

 Score =  288 bits (736), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 156/390 (40%), Positives = 226/390 (57%), Gaps = 21/390 (5%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           ++ +  L ERG I Q+++   L    +QG V+ Y G+D TA SLH GHL  L+ L   Q 
Sbjct: 4   NNLIKQLQERGLIAQVTDENALAERLAQGPVSLYCGFDPTADSLHLGHLVPLLCLKRFQL 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++     ++E +EKI+   S F+ +  G+  A  
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKATERKLNTEATVKEWVEKIRRQVSPFLDFDCGENSAKT 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYDF 184
            NN  W  ++  +  LR+IG  FSVN+M++ E+V+ RL R+   +SF EF+Y +LQ+YDF
Sbjct: 124 ANNYDWFGNMDVLAFLRDIGKHFSVNQMINKEAVKQRLNRDDVGISFTEFSYNLLQSYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L + +   LQ+GGSDQWGNI  GIDL  R+   ++F +T PL+T + GTK GKT  GA
Sbjct: 184 ARLNEVHGVELQIGGSDQWGNITSGIDLTRRITQKQVFGMTVPLITKSDGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + +ID +    K  GK    A+ +
Sbjct: 244 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMNLEDIDALEEEDKNSGK-APRAQYV 302

Query: 302 IATEITTMVHGREEAEKA----------ATAAMECFDMSIHSQH-MPTISISKDEVSRGM 350
           +A ++T MVHG E    A          A A +   D +  +Q  MP I     E+ +G 
Sbjct: 303 LAEQVTGMVHGEEGLAAAKRITESLFSGAAADLTEADFAQLAQDGMPVI-----ELEKGA 357

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKIN 380
            L   +V AG   S  +AR  + SNA+ IN
Sbjct: 358 DLQQALVNAGLVPSRGQARTMISSNAVAIN 387


>gi|194017821|ref|ZP_03056430.1| tyrosyl-tRNA synthetase [Bacillus pumilus ATCC 7061]
 gi|194010473|gb|EDW20046.1| tyrosyl-tRNA synthetase [Bacillus pumilus ATCC 7061]
          Length = 422

 Score =  288 bits (736), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 161/420 (38%), Positives = 241/420 (57%), Gaps = 13/420 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S  +  LS RG I Q ++   L  L S+  +  Y G+D TA SLH GHL  ++ L   Q+
Sbjct: 2   SQLMEELSFRGLIQQQTDEEGLTKLLSEEKIKLYSGFDPTADSLHIGHLLPILTLRRFQE 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH PI+L+GG T +IGDPSF+   R +  ++ +++  +KIKG  S F+ +  G+  A++
Sbjct: 62  AGHHPIALVGGATGLIGDPSFKKAERSLNPAEIVEQWSDKIKGQLSQFLDFEAGENPAVI 121

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  W+  +  I  LR+IG  F VN ML+ + V SR+  E  +S+ EF+Y+ILQ+ DF+
Sbjct: 122 VNNFDWISQMNVITFLRDIGKNFGVNFMLAKDIVSSRI--ETGISYTEFSYVILQSLDFL 179

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKLFALTSPLLTTASGTKMGKTLSG 243
            L KN +C+LQ+GGSDQWGNI  G++L  + +    K F LT PL+T A GTK GKT  G
Sbjct: 180 NLYKNENCKLQIGGSDQWGNITSGLELIRKSEAEGAKAFGLTMPLVTKADGTKFGKTEGG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM-AKLQ-GKEINEAKKI 301
           AIWL+KE TSPY F+Q+W N DD DVV + K  T L   EI     K+Q   E  EA++ 
Sbjct: 240 AIWLDKEKTSPYEFYQFWINTDDRDVVKYLKYFTFLSKEEIASYEEKVQTAPEKREAQRR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV-------SRGMGLLT 354
           +A E+TT+VHGRE  E+A   +   F   I S     + +   +V       +  + L+ 
Sbjct: 300 LAEEVTTLVHGRESLEQAVNISNALFKGEIKSLSAEEVKVGFKDVPSMEKSSTEELTLVD 359

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           ++V++  + S  +AR  + + A+ IN    +++   +  +D        L  GKK + + 
Sbjct: 360 VLVESKLSPSKRQAREDITNGAVSINGERQTDKDYVLSTEDRIENQFTVLRRGKKKYFLV 419


>gi|159482042|ref|XP_001699082.1| hypothetical protein CHLREDRAFT_139405 [Chlamydomonas reinhardtii]
 gi|158273145|gb|EDO98937.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 492

 Score =  288 bits (736), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 152/435 (34%), Positives = 239/435 (54%), Gaps = 24/435 (5%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           + + +S+L  RG I +++N  EL+   + G ++ Y G+D TA SLH G+L  +++L W Q
Sbjct: 59  RPNIVSLLRARGLIQEVTNTEELERAAAAGRLSVYCGFDPTADSLHLGNLLGIVVLAWFQ 118

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSS-FIKYGTGKTDA 123
           + GH+P++L+GG T  +GDPS R   R ++  ++I+ N+  I  +     ++       A
Sbjct: 119 RCGHEPVALLGGATGRVGDPSGRSTERPVLSEEQIEHNVTSIGNLLRGILVRNSPPDAPA 178

Query: 124 L-MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
           + +LNN  W  S+ ++  LRE+G F  V  M++ +SVR+R++ EQ +SF EF Y +LQ Y
Sbjct: 179 VRVLNNLDWFGSMGFLTFLREVGKFARVGTMMAKDSVRTRMESEQGISFTEFTYQLLQGY 238

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDL------GERLKTPKLFALTSPLLTTASGTK 236
           DFV L + +  R+Q+GGSDQWGNI  G DL      GE  + P  + LT PLL  + G K
Sbjct: 239 DFVHLCREHGVRVQIGGSDQWGNITAGTDLIRRLLGGEDKEAPACYGLTFPLLVDSEGRK 298

Query: 237 MGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGK 293
            GK++ GAIWL  E  SPY F+QY   + DADVV   K LT LP+ E++ +    +  G 
Sbjct: 299 FGKSVGGAIWLAAERLSPYKFYQYLFQVTDADVVKLLKMLTFLPLPEVEALEAAMRAPGY 358

Query: 294 EINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQ-----------HMPTISIS 342
             N A+K +A E+T  VHG EE    A  A E       +Q             P+ S+ 
Sbjct: 359 VPNTAQKRLAEEVTRFVHG-EEGLAQALKATEALKPGAATQLDAATLEEVAGDAPSASLP 417

Query: 343 KDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNI 402
           +  V+ G  L  ++V      S + AR+ +K   + +NN+ +  E   ++ +D      +
Sbjct: 418 RASVA-GAPLADVMVAIKLQPSKSAARKLIKGGGVYLNNAKVVEELYVVRPEDLIDGRLL 476

Query: 403 KLSFGKKNHIICHLC 417
            ++ GKKN ++  + 
Sbjct: 477 LVAAGKKNKMLVRIV 491


>gi|218767580|ref|YP_002342092.1| putative tyrosyl-tRNA synthetase [Neisseria meningitidis Z2491]
 gi|81543095|sp|Q9JVY6|SYY_NEIMA RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|121051588|emb|CAM07886.1| putative tyrosyl-tRNA synthetase [Neisseria meningitidis Z2491]
          Length = 431

 Score =  288 bits (736), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 156/380 (41%), Positives = 222/380 (58%), Gaps = 14/380 (3%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I Q ++   LD L ++  +  Y G+D TA SLH GHL  ++ L   Q+ GH PI
Sbjct: 7   LQSRGLIAQTTDIEALDALLNEQKIALYCGFDPTADSLHIGHLLPVLALRRFQQAGHTPI 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+   R +  ++ +   +E I+   + F+ +  G   A+M NN  W
Sbjct: 67  ALVGGATGMIGDPSFKAAERSLNSAETVAGWVESIRNQLTPFLSFEGGNA-AIMANNADW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQS-LSFLEFNYMILQAYDFVELAKN 190
              +  +D LR+IG  FSVN ML+ ESV+ R+ R+ + +SF EF Y +LQ YDF EL K 
Sbjct: 126 FGKMNCLDFLRDIGKHFSVNAMLNKESVKQRIDRDGAGISFTEFAYSLLQGYDFAELNKR 185

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKE 250
           +   L++GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  GA+WLN +
Sbjct: 186 HGAVLEIGGSDQWGNITAGIDLTRRLNQKQVFGLTLPLVTKSDGTKFGKTEGGAVWLNAK 245

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKIIATEIT 307
            TSPY F+Q+W  + DADV  F K  T L + EID +    K  G +  EA++I+A E+T
Sbjct: 246 KTSPYQFYQFWLKVADADVYKFLKYFTFLSIEEIDAIEAKDKASGTK-PEAQRILAEEMT 304

Query: 308 TMVHGREEAEKAATAAMECFDMSIHS-------QHMPTISISKDEVSRGMGLLTLIVKAG 360
            ++HG E A +AA    E       S       + +    +   EVS G+ ++  +VK G
Sbjct: 305 RLIHG-EAALQAAQRISESLFAEDQSSLTESDFEQLALDGLPAFEVSDGINVVEALVKTG 363

Query: 361 FATSTNEARRHLKSNAIKIN 380
            A+S  EAR  + S A+ +N
Sbjct: 364 LASSNKEARGFVNSKAVLLN 383


>gi|320160179|ref|YP_004173403.1| tyrosyl-tRNA synthetase [Anaerolinea thermophila UNI-1]
 gi|319994032|dbj|BAJ62803.1| tyrosyl-tRNA synthetase [Anaerolinea thermophila UNI-1]
          Length = 426

 Score =  288 bits (736), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 148/400 (37%), Positives = 228/400 (57%), Gaps = 13/400 (3%)

Query: 30  LCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDE 89
           L ++  VT Y G+D TA SLH GH   L+ L  LQ+ GH PI++ GGGT +IGDPS +  
Sbjct: 25  LLAKEKVTVYNGFDPTADSLHVGHTLPLIALARLQRFGHTPIAVAGGGTGMIGDPSGKSS 84

Query: 90  SRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFS 149
            R+++  ++I+ N+  I+   +  + +      A ++NN  WL  +  +D LR+IG  F+
Sbjct: 85  ERQLLSREQIEYNVSCIQKQLAHLLDFEVKSNPARLVNNADWLLKLNLVDFLRDIGKHFT 144

Query: 150 VNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICG 209
           VN ML+ +SV+SR+ RE+ +SF EF+YM+LQ+YDF+ L   + C+LQ GGSDQWGNI  G
Sbjct: 145 VNYMLAKDSVKSRIDREEGISFTEFSYMLLQSYDFLHLYDTFGCKLQTGGSDQWGNITAG 204

Query: 210 IDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADV 269
            +L  R++  + + +   L+T A GTK GKT SG++WL+   TSPY F+Q+W N DD DV
Sbjct: 205 AELIRRVRGGQAYGMVYHLITKADGTKFGKTESGSVWLDPNKTSPYRFYQFWLNTDDRDV 264

Query: 270 VSFAKRLTTLPMSEIDRM-AKLQGK-EINEAKKIIATEITTMVHGREEAEKAATAAMECF 327
           V + K  T     EI  + A L  + E  E  + +A  +T M+HG     +A  A+   F
Sbjct: 265 VKYLKYFTFFTREEIAELEASLAERPEQREPHRALARAMTQMIHGETALARAEQASQALF 324

Query: 328 DMSIHS----------QHMPTISISKDEV-SRGMGLLTLIVKAGFATSTNEARRHLKSNA 376
              + +            +P+  + + ++   G  L+ L+V AG A S  EARR+++   
Sbjct: 325 GGELETLTAAEIADIFSEVPSCEVPRHQLEGEGYPLVDLLVTAGVAKSKGEARRNIQEGG 384

Query: 377 IKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           I +NN  + +    + LQD      + L  G+KN+ +  L
Sbjct: 385 IYVNNRRVEDLNRAVHLQDALQGQFVVLRKGRKNYTLVRL 424


>gi|289167043|ref|YP_003445310.1| tyrosyl-tRNA synthetase 1 [Streptococcus mitis B6]
 gi|288906608|emb|CBJ21441.1| tyrosyl-tRNA synthetase 1 [Streptococcus mitis B6]
          Length = 418

 Score =  287 bits (735), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 157/417 (37%), Positives = 232/417 (55%), Gaps = 21/417 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L ERG I Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  GHKP 
Sbjct: 7   LKERGLIFQTTDEEALRKALEEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAGHKPY 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+D  R +     +   ++ I+G  S F+ +  G+  A+M+NN  W
Sbjct: 67  ALVGGATGLIGDPSFKDAERSLQTKDTVDGWVKSIQGQLSRFLDFENGENKAVMVNNYDW 126

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
             SI +ID LR+IG +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF  L +++
Sbjct: 127 FGSISFIDFLRDIGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFFVLNQDH 184

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
           +  LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WLN E 
Sbjct: 185 NVTLQIGGSDQWGNMTAGTELLRRKADKTGHVITVPLITDATGKKFGKSEGNAVWLNPEK 244

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATEITTM 309
           TSPY  +Q+W N+ DAD V F K  T L + EI+ + K      +E  A+K++A E+ T+
Sbjct: 245 TSPYEMYQFWMNVMDADAVRFLKIFTFLSLDEIEDIRKQFEAAPHERLAQKVLAREVVTL 304

Query: 310 VHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIVKA 359
           VHG E  ++A     + F  +I +          + +P   +  DE    + ++ L+V A
Sbjct: 305 VHGEEAYKEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVQADE---NLNIVELLVSA 361

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN--IKLSFGKKNHIIC 414
           G   S  +AR  +++ AI +N   I +  L   L D D   N    +  GKK + + 
Sbjct: 362 GVVNSKRQAREDVQNGAIYVNGDRIQD--LDYVLNDADKLENELTVIRRGKKKYFVL 416


>gi|313886844|ref|ZP_07820549.1| tyrosine--tRNA ligase [Porphyromonas asaccharolytica PR426713P-I]
 gi|312923734|gb|EFR34538.1| tyrosine--tRNA ligase [Porphyromonas asaccharolytica PR426713P-I]
          Length = 436

 Score =  287 bits (735), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 154/430 (35%), Positives = 245/430 (56%), Gaps = 24/430 (5%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S  +S L  RG IH I    E  +  ++ + TAY+G+D TA SLH GHL  +M+L  LQ+
Sbjct: 4   SSLISELKARGMIHNIMPGTEEQL--TEHLTTAYVGFDPTADSLHIGHLVGVMMLRHLQR 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD-AL 124
            GH+PI+L+GG T +IGDPS + + R ++    ++ N E I      F+ + +   + AL
Sbjct: 62  AGHRPIALLGGATGMIGDPSMKSQERNLLDMDTLRHNQECIGRQLGHFLDFESDAPNKAL 121

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR--EQSLSFLEFNYMILQAY 182
           +LNN  W+    +++ +R+IG   +VN M++ +SV+ RL+   E  LSF EF+Y +LQ Y
Sbjct: 122 LLNNYDWMKDYSFLNFIRDIGKHITVNYMMAKDSVKRRLEANAEAGLSFTEFSYQLLQGY 181

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           D++ L + Y CR+QMGGSDQWGNI  G +L  R++  + F +T PL+  A GTK GKT  
Sbjct: 182 DYLHLYREYGCRVQMGGSDQWGNITTGTELIRRIEGGEAFGVTCPLIKKADGTKFGKTEQ 241

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEA--KK 300
           G +WL++  TSPY F Q+W N+ D D   F K  T++P+ EID + +   +  +E   + 
Sbjct: 242 GNVWLDRRYTSPYTFCQFWLNVSDEDAERFVKIFTSIPLEEIDSLIERHRQAPHERLLQH 301

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQ--------------HMPTISISKD-- 344
            +A ++T MVHGRE+ E++ +A    F  + H Q               +P  ++ +   
Sbjct: 302 TLAEQLTVMVHGREDYEQSMSAGQILFGNNTHDQLRQMSEELLKEVMAGVPNYNVGRTLL 361

Query: 345 EVSRGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
           E + G+ LL L+V+ A    S  E R+ + SN I +N   ++++   +   D  +   + 
Sbjct: 362 EQADGVKLLDLLVEHAPIFKSKGELRKLIASNGISLNKEKVADQDRVVTTDDLIAGKYLI 421

Query: 404 LSFGKKNHII 413
           +  GKKN+ +
Sbjct: 422 VQRGKKNYYL 431


>gi|31789473|gb|AAP58586.1| putative tyrosyl-tRNA synthetase [uncultured Acidobacteria
           bacterium]
          Length = 422

 Score =  287 bits (735), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 149/401 (37%), Positives = 232/401 (57%), Gaps = 18/401 (4%)

Query: 31  CSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDES 90
            + G + AY G+D TA+SLH G L  ++ L  LQ+ GH PI+++GGGT +IGDPS +   
Sbjct: 24  LASGPLRAYAGFDPTAASLHVGSLMPILGLARLQRLGHTPIAVVGGGTGLIGDPSGKTLE 83

Query: 91  RRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSV 150
           R++M S ++ E++  I+     F+ +G G   AL+++N  WL S+  I  +R++G  F+V
Sbjct: 84  RQLMDSSKVDEHVAGIRRQLERFLDFGRGPASALLVDNAEWLTSLGAIAFMRDVGKHFTV 143

Query: 151 NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGI 210
           N ML+ ESV+ R+ RE  +S+ EF+Y++LQAYD++ L   + C LQ+GGSDQWGNI  GI
Sbjct: 144 NYMLAKESVKGRIDREDGISYTEFSYLLLQAYDYLVLHDRHGCALQIGGSDQWGNITAGI 203

Query: 211 DLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVV 270
           +L  RL+  K   L  PL+TTA+GTK GKT +GAIWL+  +T PY F+Q+W N DD D V
Sbjct: 204 ELIRRLRGAKAHGLVMPLVTTATGTKFGKTEAGAIWLDPSLTKPYEFYQFWLNTDDRDAV 263

Query: 271 SFAKRLTTLPMSEIDRM--AKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECF- 327
            + K  T L  + +  +  + L   E   A++ +A E+T +VHG +    A  A+ + F 
Sbjct: 264 RYLKFFTFLDAARVGELEASSLAEPEKRVAQRELAREVTRLVHGSQAVLDAEAASEKLFR 323

Query: 328 ----DMSIHS-----QHMP--TISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNA 376
                MS+        ++P  T++ S D    G  L  L+   G   S  EA+R +++  
Sbjct: 324 GDVTQMSVDELLQVFANVPSSTVAFSDD----GWALADLVTSVGVTKSKGEAQRLVRAGG 379

Query: 377 IKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           + +N   I  EK ++  +D        +  GKK++ +  + 
Sbjct: 380 LYVNERRIGEEKARLTAEDAIGGQVFVIRKGKKDNFLVRIS 420


>gi|152995102|ref|YP_001339937.1| tyrosyl-tRNA synthetase [Marinomonas sp. MWYL1]
 gi|150836026|gb|ABR70002.1| tyrosyl-tRNA synthetase [Marinomonas sp. MWYL1]
          Length = 448

 Score =  287 bits (735), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 162/395 (41%), Positives = 220/395 (55%), Gaps = 17/395 (4%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M     D L+ L  RG I Q++   EL      G  T Y G+D TA SLH GHL  L++L
Sbjct: 15  MTVSSKDLLNDLQARGLIAQMTAEDELKKHLDGGSRTLYCGFDPTADSLHLGHLVPLLVL 74

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GH PI+L+GG T +IGDPSF+   R++  S  +    EKI+G  S F+K+    
Sbjct: 75  KRFQDAGHNPIALVGGATGLIGDPSFKAAERQLNTSDVVASWAEKIRGQVSQFVKFDNVP 134

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQS-LSFLEFNYMIL 179
             A ++NN  W   +  +D LR+IG  FSVN M++ ESV+ RL RE + +SF EF+Y +L
Sbjct: 135 NPARVVNNLDWAGEMSVLDFLRDIGKHFSVNAMINKESVQQRLNREGAGISFTEFSYALL 194

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK 239
           Q  DF EL + YDC LQ+GGSDQWGNI+ GIDL  R    + F LT PL+T + GTK GK
Sbjct: 195 QGMDFAELNRAYDCTLQIGGSDQWGNIVGGIDLSRRQNQSQTFGLTVPLVTKSDGTKFGK 254

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ----GKEI 295
           T SGA+WL+   TS Y F+Q+W N  DADV  F K  T L ++EID + K      GK  
Sbjct: 255 TESGAVWLDSSKTSQYAFYQFWMNTADADVYKFLKFFTFLDLAEIDAIEKADKESGGKP- 313

Query: 296 NEAKKIIATEITTMVHGRE---EAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMG- 351
            +A+ I+A E T +VHG E    AE+   A        +  Q +  I +     S   G 
Sbjct: 314 -QAQAILAREATKLVHGEEGLQAAERITNALFSGEADQLSEQDLEQIQLDGLPSSSLAGI 372

Query: 352 ------LLTLIVKAGFATSTNEARRHLKSNAIKIN 380
                 L +L+  AG A S  + +  L+ +++ +N
Sbjct: 373 DLVETPLTSLMADAGLAASGKQVKDALQRDSVFVN 407


>gi|319760503|ref|YP_004124441.1| tyrosyl-tRNA synthetase [Candidatus Blochmannia vafer str. BVAF]
 gi|318039217|gb|ADV33767.1| tyrosyl-tRNA synthetase [Candidatus Blochmannia vafer str. BVAF]
          Length = 432

 Score =  287 bits (735), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 158/390 (40%), Positives = 229/390 (58%), Gaps = 21/390 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D ++ L ERGFI QI+N   L+ +     +T Y G+D T+ SLH GHL  L+ L   QK 
Sbjct: 11  DVINYLYERGFIAQITNKNILNSILQSKSITLYCGFDPTSDSLHIGHLVPLLCLKKFQKF 70

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKT--DAL 124
           GHKPI L+GG T +IGDPSF+D  R++     IQ+ IEKIK   SSFI   +     +  
Sbjct: 71  GHKPIILLGGATGLIGDPSFKDSERQLNPMNTIQQWIEKIKSQISSFIDLNSKNHPHNIH 130

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYD 183
           ++NN TW  S   +  LR+IG FFS+N+M++ + ++ RLK +   +S+ EF+Y ++Q+YD
Sbjct: 131 IVNNYTWFSSTNILTFLRDIGKFFSINKMINKDFIKKRLKEDNCGISYTEFSYNLMQSYD 190

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F  L KNY   LQ+GGSDQWGNII GIDL  R+   K + +T PLLTT +  K GKT   
Sbjct: 191 FFYLYKNYGVILQIGGSDQWGNIISGIDLIRRIYNKKTYGITVPLLTTINNIKFGKTEKN 250

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE--INEAKKI 301
            IW++   TSPY F+QYW NIDD  V SF K  T + + +I+ + K       I   K  
Sbjct: 251 TIWIDPNKTSPYKFYQYWLNIDDKQVCSFLKIFTDMNIEQINFLEKKMNNNYFIPITKTT 310

Query: 302 IATEITTMVHGREEAEKAATAAMECF-----DMSIHSQH------MPTISISKDEVSRGM 350
           +A +IT ++HG++  + A       F     D+++   +      +P+I + KD     +
Sbjct: 311 LAEKITKLIHGKQGLKSAQRITKNIFYDHPLDLTLEDFNQLAKDGIPSIILKKD-----I 365

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKIN 380
            L   +V++  ATS ++AR  ++S+AI IN
Sbjct: 366 TLQQALVESKLATSKSQARYFIESHAITIN 395


>gi|304397706|ref|ZP_07379583.1| tyrosyl-tRNA synthetase [Pantoea sp. aB]
 gi|304354878|gb|EFM19248.1| tyrosyl-tRNA synthetase [Pantoea sp. aB]
          Length = 424

 Score =  287 bits (735), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 157/404 (38%), Positives = 230/404 (56%), Gaps = 19/404 (4%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG I Q+++   L    +QG ++ Y G+D TA SLH GHL  L+ L   Q 
Sbjct: 4   SNLIQQLQERGLIAQVTDEAALTEKLAQGPISLYCGFDPTADSLHLGHLVPLLCLKRFQD 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++  S  + E +EKI+   + F+ +  G   A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTSDTVNEWVEKIRQQVAPFLDFDCGSNSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDF 184
            NN  W  S+  +  LR+IG  FSVN+M++ E+V+ RL R +Q +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGSMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDQGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L + +   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  GA
Sbjct: 184 ACLNELHGVSLQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKSDGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE--INEAKKII 302
           +WL+ + TSPY F+Q+W N  DADV  F K  T L + EI+ + +          A+ ++
Sbjct: 244 VWLDAKKTSPYKFYQFWINTADADVYRFLKFFTFLSIEEINALEEEDKNSGTAPRAQYVL 303

Query: 303 ATEITTMVHGRE--EAEKAATAAMECFDMS---------IHSQHMPTISISKDEVSRGMG 351
           A ++T +VHG     A K  TA++    +S         +    MPTI++  D+      
Sbjct: 304 AEQVTRLVHGEAGLTAAKRITASLFSGSVSEMTEADFEQLAQDGMPTIALGADD-----D 358

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           L   +VKA    S  +AR  + SNA+ +N    S+ + +    D
Sbjct: 359 LQQALVKAELVPSRGQARTMIGSNAVSLNGEKQSDAEYRFSDSD 402


>gi|308186734|ref|YP_003930865.1| Tyrosyl-tRNA synthetase [Pantoea vagans C9-1]
 gi|308057244|gb|ADO09416.1| Tyrosyl-tRNA synthetase [Pantoea vagans C9-1]
          Length = 424

 Score =  287 bits (735), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 159/407 (39%), Positives = 233/407 (57%), Gaps = 25/407 (6%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG I Q+++   L    +QG ++ Y G+D TA SLH GHL  L+ L   Q 
Sbjct: 4   SNLIQQLQERGLIAQVTDEDALTEKLAQGPISLYCGFDPTADSLHLGHLVPLLCLKRFQD 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+P++L+GG T +IGDPSF+   R++  S  + E +EKI+   + F+ +  G   A+ 
Sbjct: 64  AGHQPVALVGGATGLIGDPSFKAAERKLNTSDTVNEWVEKIRQQVAPFLDFDCGSNSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDF 184
            NN  W  S+  +  LR+IG  FSVN+M++ E+V+ RL R +Q +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGSMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDQGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L + +   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  GA
Sbjct: 184 ACLNERHGVSLQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKSDGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN-----EAK 299
           +WL+ + TSPY F+Q+W N  DADV  F K  T L + EI   + L+ ++ N      A+
Sbjct: 244 VWLDAKKTSPYKFYQFWINTADADVYRFLKFFTFLSIEEI---SALEEEDKNSGTAPRAQ 300

Query: 300 KIIATEITTMVHGRE--EAEKAATAAM---ECFDMS------IHSQHMPTISISKDEVSR 348
            ++A ++T +VHG     A K  TA++      DM+      +    MPTI +  D+   
Sbjct: 301 YVLAEQVTRLVHGEAGLSAAKRITASLFSGSVSDMTEADFEQLAQDGMPTIVLGADD--- 357

Query: 349 GMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
              L   +VKA    S  +AR  + SNA+ +N    S+ + +    D
Sbjct: 358 --DLQQALVKAELVPSRGQARTMIGSNAVSLNGEKQSDAEYRFSDSD 402


>gi|254804336|ref|YP_003082557.1| Tyrosyl-tRNA synthetase [Neisseria meningitidis alpha14]
 gi|254667878|emb|CBA03967.1| Tyrosyl-tRNA synthetase [Neisseria meningitidis alpha14]
          Length = 432

 Score =  287 bits (735), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 157/379 (41%), Positives = 221/379 (58%), Gaps = 12/379 (3%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R  I Q ++   LD L ++  +  Y G+D TA SLH GHL  ++ L   Q+ GH PI
Sbjct: 8   LQSRDLIAQTTDIEALDALLNEQKIALYCGFDPTADSLHIGHLLPVLALRRFQQAGHTPI 67

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+   R +  ++ +   +E I+   + F+ +  G   A+M NN  W
Sbjct: 68  ALVGGATGMIGDPSFKAAERSLNSAETVAGWVESIRNQLTPFLSFEGGNA-AIMANNADW 126

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQS-LSFLEFNYMILQAYDFVELAKN 190
              +  +D LR+IG  FSVN ML+ ESV+ R+ R+ + +SF EF Y +LQ YDF EL K 
Sbjct: 127 FGKMNCLDFLRDIGKHFSVNAMLNKESVKQRIDRDGAGISFTEFAYSLLQGYDFAELNKR 186

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKE 250
           +   L++GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  GA+WLN +
Sbjct: 187 HGAVLEIGGSDQWGNITAGIDLTRRLNQKQVFGLTLPLVTKSDGTKFGKTEGGAVWLNAK 246

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM-AKLQGK-EINEAKKIIATEITT 308
            TSPY F+Q+W  + DADV  F K  T L + EID + AK Q      EA++I+A E+T 
Sbjct: 247 KTSPYQFYQFWLKVADADVYKFLKYFTFLSIEEIDAVEAKDQASGSKPEAQRILAEEMTR 306

Query: 309 MVHGREEAEKAATAAMECFDMSIHS-------QHMPTISISKDEVSRGMGLLTLIVKAGF 361
           ++HG EEA  AA    E       S       + +    +   EVS G+ ++  +VK G 
Sbjct: 307 LIHG-EEALAAAQRISESLFAEDQSSLTESDFEQLALDGLPAFEVSDGINVVEALVKTGL 365

Query: 362 ATSTNEARRHLKSNAIKIN 380
           A+S  EAR  + S A+ +N
Sbjct: 366 ASSNKEARGFVNSKAVLLN 384


>gi|319409842|emb|CBY90151.1| tyrosyl-tRNA synthetase (tyrosine-tRNA ligase; TyrRS) [Neisseria
           meningitidis WUE 2594]
          Length = 431

 Score =  287 bits (734), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 156/380 (41%), Positives = 222/380 (58%), Gaps = 14/380 (3%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I Q ++   LD L ++  +  Y G+D TA SLH GHL  ++ L   Q+ GH PI
Sbjct: 7   LQSRGLIAQTTDIEALDALLNEQKIALYCGFDPTADSLHIGHLLPVLALRRFQQAGHTPI 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+   R +  ++ +   +E I+   + F+ +  G   A+M NN  W
Sbjct: 67  ALVGGATGMIGDPSFKAAERSLNSAETVAGWVESIRNQLTPFLSFEGGNA-AIMANNADW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQS-LSFLEFNYMILQAYDFVELAKN 190
              +  +D LR+IG  FSVN ML+ ESV+ R+ R+ + +SF EF Y +LQ YDF EL K 
Sbjct: 126 FGKMNCLDFLRDIGKHFSVNAMLNKESVKQRIDRDGAGISFTEFAYSLLQGYDFAELNKR 185

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKE 250
           +   L++GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  GA+WLN +
Sbjct: 186 HGAVLEIGGSDQWGNITAGIDLTRRLHQKQVFGLTLPLVTKSDGTKFGKTEGGAVWLNAK 245

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKIIATEIT 307
            TSPY F+Q+W  + DADV  F K  T L + EID +    K  G +  EA++I+A E+T
Sbjct: 246 KTSPYQFYQFWLKVADADVYKFLKYFTFLSIEEIDAIEAKDKASGTK-PEAQRILAEEMT 304

Query: 308 TMVHGREEAEKAATAAMECFDMSIHS-------QHMPTISISKDEVSRGMGLLTLIVKAG 360
            ++HG E A +AA    E       S       + +    +   EVS G+ ++  +VK G
Sbjct: 305 RLIHG-EAALQAAQRISESLFAEDQSSLTESDFEQLALDGLPAFEVSDGINVVEALVKTG 363

Query: 361 FATSTNEARRHLKSNAIKIN 380
            A+S  EAR  + S A+ +N
Sbjct: 364 LASSNKEARGFVNSKAVLLN 383


>gi|319440355|ref|ZP_07989511.1| hypothetical protein CvarD4_01176 [Corynebacterium variabile DSM
           44702]
          Length = 419

 Score =  287 bits (734), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 166/416 (39%), Positives = 250/416 (60%), Gaps = 19/416 (4%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQ--GVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           S+ L  LS RG + Q ++   +D L ++     TAY+G+D T  SLHAGHL  L++L  L
Sbjct: 2   SNILDELSWRGLVAQSTD---IDALRTELDTPTTAYVGFDPTGPSLHAGHLVPLLMLARL 58

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ-ENIEKIKGIFSSFIKYGTGKTD 122
           Q+ GH PI L GG T +IGDP  RD   R M S+E   EN+E+I+   +SF+ +  G+  
Sbjct: 59  QRAGHTPILLAGGATGMIGDP--RDVGERSMISEETAAENVERIRKQLASFVSF-EGENA 115

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
           A+M NN  W  S+  +D LR++G  FS+N MLS ++V+ RL+ +  +S+ EF+YM+LQA 
Sbjct: 116 AIMANNMDWTGSMSVVDFLRDVGKNFSLNTMLSRDTVKRRLESD-GISYTEFSYMLLQAN 174

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DFV+L +N+DCRLQ+GGSDQWGNI+ G+DL  R+    +  LT PL+T + G K GK+  
Sbjct: 175 DFVQLRRNHDCRLQIGGSDQWGNIVSGVDLNRRVDGEVVHGLTVPLVTDSEGRKFGKSTG 234

Query: 243 GA-IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA-KLQGKEIN-EAK 299
           G  +WL+ EMTSPY+++QY+ N  DADV+ + +  T L   E+DR+A +++ +    EA+
Sbjct: 235 GGKLWLDPEMTSPYSWYQYFLNAADADVIRYLRWFTFLGQEELDRLAVEVEERPFKREAQ 294

Query: 300 KIIATEITTMVHGRE---EAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMG---LL 353
           + +A E+TT+VHG +   + EKAA A     +++   +     ++S+ EV+       +L
Sbjct: 295 RTLAREMTTLVHGEDAVAKVEKAAEALFGKAELAELDEQTLASALSETEVAAVAADATIL 354

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
            L+V AG   +   ARR +      +NN  IS        +D      + L  GKK
Sbjct: 355 DLLVGAGLEKTKGAARRTVGEGGAYVNNERISEIDWTPSAEDLLHGSWLVLRKGKK 410


>gi|212638313|ref|YP_002314833.1| tyrosyl-tRNA synthetase [Anoxybacillus flavithermus WK1]
 gi|212559793|gb|ACJ32848.1| Tyrosyl-tRNA synthetase [Anoxybacillus flavithermus WK1]
          Length = 429

 Score =  287 bits (734), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 154/396 (38%), Positives = 228/396 (57%), Gaps = 25/396 (6%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D L  L  RG I+Q+++   L  L ++  V  Y G+D TA SLH GHL  +++L   Q+ 
Sbjct: 12  DLLRDLQFRGLINQMTDEDGLKALLAEESVKVYCGFDPTADSLHIGHLLPILMLRRFQRA 71

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI+L+GG T +IGDPS +   R++   + +    E+IK   S F+ +      A++ 
Sbjct: 72  GHQPIALVGGATGLIGDPSGKKAERKLNEKETVAYYSERIKQQLSRFLDFEKVDNPAIIA 131

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W+ S+  I  LR++G  F +N ML+ ESV+SRL  E  +SF EF+YMILQAYDF++
Sbjct: 132 NNYEWIGSLDVITFLRDVGKNFGINYMLAKESVQSRL--ETGISFTEFSYMILQAYDFLK 189

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKT-PKLFALTSPLLTTASGTKMGKTLSGAI 245
           L + Y C+LQ+GGSDQWGNI  G++L  + +   K+F LT PL+T A GTK GKT  GA+
Sbjct: 190 LYEMYGCKLQVGGSDQWGNITAGLELIRKTEEDAKVFGLTVPLVTKADGTKFGKTEGGAV 249

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIA 303
           WL+ + TSPY F+Q+W N DD DVV + K  T L   EI  + +   +  E   A+K +A
Sbjct: 250 WLDADKTSPYEFYQFWINTDDRDVVKYLKYFTFLSHEEIIELERQTAEAPEKRAAQKALA 309

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-------------M 350
            E+T +VHG E  ++A   +   F   +         ++ DE+ +G             M
Sbjct: 310 AEMTRLVHGEEALQQAINISEALFSGDV-------AKLTADEIEQGFKDVPSYVCDEKEM 362

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISN 386
            L+ L+V +G   S  +AR  + + AI IN   + +
Sbjct: 363 ALVDLLVASGICPSKRQAREDVTNGAIYINGERVQD 398


>gi|242239132|ref|YP_002987313.1| tyrosyl-tRNA synthetase [Dickeya dadantii Ech703]
 gi|242131189|gb|ACS85491.1| tyrosyl-tRNA synthetase [Dickeya dadantii Ech703]
          Length = 424

 Score =  287 bits (734), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 161/429 (37%), Positives = 241/429 (56%), Gaps = 27/429 (6%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q 
Sbjct: 3   SNLIQQLQERGLVAQVTDEAALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQM 62

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + + E ++KI+   + F+ +  G+  A+ 
Sbjct: 63  AGHKPVALVGGATGLIGDPSFKAAERKLNTEETVSEWVDKIRRQAAPFLDFDCGENSAVA 122

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYDF 184
            NN  W  S+  +  LR+IG  FSVN+M++ E+V+ RL R+   +SF EF+Y +LQ YDF
Sbjct: 123 ANNYDWFGSMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDVGISFTEFSYNLLQGYDF 182

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L   +   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT SGA
Sbjct: 183 ASLNALHGVELQIGGSDQWGNITSGIDLTRRLHQKQVFGLTVPLITKSDGTKFGKTESGA 242

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN-----EAK 299
           +WL+ + TSPY F+Q+W N  DADV  F K  T L   +ID +  L+ ++ N      A+
Sbjct: 243 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFL---DIDAINALEEEDKNSGTAPRAQ 299

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKD-----EVSR 348
            ++A E+T +VHG E        A      S+ + H+  ++      +++D     E+ +
Sbjct: 300 SVLAEEVTRLVHGEE-----GLVAARRITQSLFNGHLGELTEADFAQLAQDGVPMVELEK 354

Query: 349 GMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGK 408
           G  L   +V +    S  +AR+ + SNAI IN    S+ +  +   D        L  GK
Sbjct: 355 GADLQQALVDSELQPSRGQARKTIASNAITINGEKQSDPEYVLADSDRLFGRYTLLRRGK 414

Query: 409 KNHIICHLC 417
           KN+  C +C
Sbjct: 415 KNY--CLVC 421


>gi|255066567|ref|ZP_05318422.1| tyrosine--tRNA ligase [Neisseria sicca ATCC 29256]
 gi|255049151|gb|EET44615.1| tyrosine--tRNA ligase [Neisseria sicca ATCC 29256]
          Length = 432

 Score =  287 bits (734), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 156/380 (41%), Positives = 222/380 (58%), Gaps = 14/380 (3%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I Q ++   LD L ++  +  Y G+D TA SLH GHL  ++ L   Q+ GH PI
Sbjct: 8   LQSRGLIAQTTDIEALDALLNEQKIALYCGFDPTADSLHIGHLLPVLALRRFQQAGHTPI 67

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+   R +  ++ +   +E I+     F+ +  G+  A+M NN  W
Sbjct: 68  ALVGGATGMIGDPSFKAVERSLNSAETVAGWVESIRNQLKPFLSF-EGENAAIMANNADW 126

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYDFVELAKN 190
             S+  +D LR+IG  FSVN ML+ ESV+ R++R+   +SF EF Y +LQ YDF EL K 
Sbjct: 127 FGSMNCLDFLRDIGKHFSVNAMLNKESVKQRIERDDVGISFTEFAYSLLQGYDFAELNKR 186

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKE 250
           +   L++GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  GA+WLN +
Sbjct: 187 HGAVLEIGGSDQWGNITAGIDLTRRLNQKQVFGLTLPLVTKSDGTKFGKTEGGAVWLNAK 246

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKIIATEIT 307
            TSPY F+Q+W  + DADV  F K  T L + EID +    K  G +  EA++I+A E+T
Sbjct: 247 KTSPYQFYQFWLKVADADVYKFLKYFTFLSIEEIDAIEAKDKASGTK-PEAQRILAEEMT 305

Query: 308 TMVHGREEAEKAATAAMECFDMSIHS-------QHMPTISISKDEVSRGMGLLTLIVKAG 360
            ++HG E A +AA    E       S       + +    +   EVS  + ++  +VK G
Sbjct: 306 RLIHG-EAALQAAQRISESLFAEDQSSLTESDFEQLALDGLPAFEVSDDLNVVEALVKTG 364

Query: 361 FATSTNEARRHLKSNAIKIN 380
            A+S  EAR  + S A+ +N
Sbjct: 365 LASSNKEARGFVNSKAVLLN 384


>gi|261363934|ref|ZP_05976817.1| tyrosine--tRNA ligase [Neisseria mucosa ATCC 25996]
 gi|288567948|gb|EFC89508.1| tyrosine--tRNA ligase [Neisseria mucosa ATCC 25996]
          Length = 431

 Score =  287 bits (734), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 156/380 (41%), Positives = 222/380 (58%), Gaps = 14/380 (3%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I Q ++   LD L ++  +  Y G+D TA SLH GHL  ++ L   Q+ GH PI
Sbjct: 7   LQSRGLIAQTTDIEALDALLNEQKIALYCGFDPTADSLHIGHLLPVLALRRFQQAGHTPI 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+   R +  ++ +   +E I+     F+ +  G+  A+M NN  W
Sbjct: 67  ALVGGATGMIGDPSFKAVERSLNSAETVAGWVESIRNQLKPFLSF-EGENAAIMANNADW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYDFVELAKN 190
             S+  +D LR+IG  FSVN ML+ ESV+ R++R+   +SF EF Y +LQ YDF EL K 
Sbjct: 126 FGSMNCLDFLRDIGKHFSVNAMLNKESVKQRIERDDVGISFTEFAYSLLQGYDFAELNKR 185

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKE 250
           +   L++GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  GA+WLN +
Sbjct: 186 HGAVLEIGGSDQWGNITAGIDLTRRLNQKQVFGLTLPLVTKSDGTKFGKTEGGAVWLNAK 245

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKIIATEIT 307
            TSPY F+Q+W  + DADV  F K  T L + EID +    K  G +  EA++I+A E+T
Sbjct: 246 KTSPYQFYQFWLKVADADVYKFLKYFTFLSIEEIDAIEAKDKASGTK-PEAQRILAEEMT 304

Query: 308 TMVHGREEAEKAATAAMECFDMSIHS-------QHMPTISISKDEVSRGMGLLTLIVKAG 360
            ++HG E A +AA    E       S       + +    +   EVS  + ++  +VK G
Sbjct: 305 RLIHG-EAALQAAQRISESLFAEDQSSLTESDFEQLALDGLPAFEVSDDLNVVEALVKTG 363

Query: 361 FATSTNEARRHLKSNAIKIN 380
            A+S  EAR  + S A+ +N
Sbjct: 364 LASSNKEARGFVNSKAVLLN 383


>gi|325204797|gb|ADZ00251.1| tyrosyl-tRNA synthetase [Neisseria meningitidis M01-240355]
          Length = 431

 Score =  287 bits (734), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 156/379 (41%), Positives = 222/379 (58%), Gaps = 12/379 (3%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I Q ++   LD L ++  ++ Y G+D TA SLH GHL  ++ L   Q+ GH PI
Sbjct: 7   LQSRGLIAQTTDIEALDALLNEQKISLYCGFDPTADSLHIGHLLPVLALRRFQQAGHTPI 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+   R +  ++ +   +E I+   + F+ +  G   A+M NN  W
Sbjct: 67  ALVGGATGMIGDPSFKAAERSLNSAETVAGWVESIRSQLTPFLSFEGGNA-AIMANNADW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQS-LSFLEFNYMILQAYDFVELAKN 190
              +  +D LR+IG  FSVN ML+ ESV+ R+ R+ + +SF EF Y +LQ YDF EL K 
Sbjct: 126 FGKMNCLDFLRDIGKHFSVNAMLNKESVKQRIDRDGAGISFTEFAYSLLQGYDFAELNKR 185

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKE 250
           +   L++GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  GA+WLN +
Sbjct: 186 HGAVLEIGGSDQWGNITAGIDLTRRLNQKQVFGLTLPLVTKSDGTKFGKTEGGAVWLNAK 245

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM-AKLQGK-EINEAKKIIATEITT 308
            TSPY F+Q+W  + DADV  F K  T L + EID + AK Q      EA++I+A E+T 
Sbjct: 246 KTSPYQFYQFWLKVADADVYKFLKYFTFLSIEEIDAVEAKDQASGSKPEAQRILAEEMTR 305

Query: 309 MVHGREEAEKAATAAMECFDMSIHS-------QHMPTISISKDEVSRGMGLLTLIVKAGF 361
           ++HG EEA  AA    E       S       + +    +   EVS  + ++  +VK G 
Sbjct: 306 LIHG-EEALAAAQRISESLFAEDQSSLTESDFEQLALDGLPTFEVSESLNVVETLVKTGL 364

Query: 362 ATSTNEARRHLKSNAIKIN 380
           A+S  EAR  + + A+ +N
Sbjct: 365 ASSNKEARGFVNNKAVLLN 383


>gi|313669059|ref|YP_004049343.1| tyrosyl-tRNA synthetase [Neisseria lactamica ST-640]
 gi|313006521|emb|CBN87985.1| putative tyrosyl-tRNA synthetase [Neisseria lactamica 020-06]
          Length = 431

 Score =  287 bits (734), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 154/384 (40%), Positives = 225/384 (58%), Gaps = 22/384 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I Q ++   LD L ++  +  Y G+D TA SLH GHL  ++ L   Q+ GH PI
Sbjct: 7   LQSRGLIAQTTDIEALDALLNEQKIALYCGFDPTADSLHIGHLLPVLALRRFQQAGHTPI 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+   R +  ++ +   +E I+   + F+ +  G   A+M NN  W
Sbjct: 67  ALVGGATGMIGDPSFKAAERSLNSAETVAGWVESIRNQLTPFLSFEGGNA-AIMANNADW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQS-LSFLEFNYMILQAYDFVELAKN 190
              +  +D LR+IG  FSVN ML+ ESV+ R++R+ + +SF EF Y +LQ YDF EL K 
Sbjct: 126 FGKMNCLDFLRDIGKHFSVNAMLNKESVKQRIERDGAGISFTEFAYSLLQGYDFAELNKR 185

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKE 250
           +   L++GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  GA+WLN +
Sbjct: 186 HGAVLEIGGSDQWGNITAGIDLTRRLHQKQVFGLTLPLVTKSDGTKFGKTEGGAVWLNAK 245

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKIIATEIT 307
            TSPY F+Q+W  + DADV  F K  T L + EID +    +  G +  EA++I+A E+T
Sbjct: 246 KTSPYQFYQFWLKVADADVYKFLKYFTFLSVEEIDAVEAKDRASGSK-PEAQRILAEEMT 304

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTIS-----------ISKDEVSRGMGLLTLI 356
            ++HG     +AA AA +    S+ ++    ++           +   EVS G+ ++  +
Sbjct: 305 RLIHG-----EAALAAAQRISESLFAEDQSRLTESDFEQLALDGLPAFEVSDGINVVEAL 359

Query: 357 VKAGFATSTNEARRHLKSNAIKIN 380
           VK G A S  EAR  + S A+ +N
Sbjct: 360 VKTGLAASNKEARGFVNSKAVLLN 383


>gi|254784884|ref|YP_003072312.1| tyrosine--tRNA ligase [Teredinibacter turnerae T7901]
 gi|237686409|gb|ACR13673.1| tyrosine--tRNA ligase [Teredinibacter turnerae T7901]
          Length = 432

 Score =  287 bits (734), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 160/403 (39%), Positives = 229/403 (56%), Gaps = 21/403 (5%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M A  ++ L  L  RG + Q++    L     Q   T Y G+D TA SLH G L  L+ L
Sbjct: 1   MTAASNELLEDLQARGLVAQMTGDDALHAWLEQ-PRTLYCGFDPTADSLHIGSLVPLLTL 59

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GHKP++L+GG T +IGDPSF+ + R++     +   ++K++G  S FI++  G+
Sbjct: 60  KRFQMAGHKPLALVGGATGLIGDPSFKAQERKLNTPDIVAGWVDKLRGQVSQFIEFDCGE 119

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMIL 179
             A ++NN  W+  I  +D LR++G  FS+N M+  ESV+ RL RE + +SF EF YMIL
Sbjct: 120 NAAEVVNNLDWIGQINVLDFLRDVGKHFSINNMVQKESVKQRLDREGEGISFTEFTYMIL 179

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK 239
           Q+YDF EL K YDC LQ+GGSDQWGNI  G DL  RL   ++F LT PL+T + GTK GK
Sbjct: 180 QSYDFAELYKQYDCTLQIGGSDQWGNITGGTDLTRRLHGGQVFGLTLPLVTKSDGTKFGK 239

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI----DRMAKLQGKEI 295
           T +G IWL+   TSPY F+Q+W N  DADV  F +  T L ++EI    D     +G+  
Sbjct: 240 TETGTIWLDPAKTSPYAFYQFWLNTADADVYKFLRYFTFLSVAEINAIEDTDKAAEGRP- 298

Query: 296 NEAKKIIATEITTMVHGRE--EAEKAATAAMECFDMSIHSQ---------HMPTISISKD 344
            +A+ I+A E+T +VHG E   A +  T AM   D++  S+          +P+  +  D
Sbjct: 299 -QAQSILAEEVTRLVHGDEGLAAAQRITQAMFSGDLADLSETDLEQLALDGLPSGDLPSD 357

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNE 387
              +   L +L+ + G   +  EA+  L   A+ IN +    E
Sbjct: 358 YADK--PLTSLLAECGMVKAAREAKDALGRKAVFINGTAYGAE 398


>gi|307131416|ref|YP_003883432.1| tyrosyl-tRNA synthetase [Dickeya dadantii 3937]
 gi|306528945|gb|ADM98875.1| tyrosyl-tRNA synthetase [Dickeya dadantii 3937]
          Length = 424

 Score =  287 bits (734), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 160/424 (37%), Positives = 234/424 (55%), Gaps = 17/424 (4%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q 
Sbjct: 3   SNLIQQLQERGLVAQVTDEGALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQM 62

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++     +QE +EKI+   + F+ +  G   A+ 
Sbjct: 63  AGHKPVALVGGATGLIGDPSFKAAERKLNTEDTVQEWVEKIRRQAAPFLDFDCGDNSAVA 122

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYDF 184
            NN  W  S+  +  LR+IG  FSVN+M++ E+V+ RL R+   +SF EF+Y +LQ YDF
Sbjct: 123 ANNYDWFGSMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDVGISFTEFSYNLLQGYDF 182

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L   +   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT SGA
Sbjct: 183 ASLNALHGVELQIGGSDQWGNITSGIDLTRRLHQKQVFGLTVPLITKSDGTKFGKTESGA 242

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN-----EAK 299
           +WL+ + TSPY F+Q+W N  DADV  F K  T L   +I+ +  L+ ++ N      A+
Sbjct: 243 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFL---DIETINALEEEDKNSGAAPRAQ 299

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLL 353
            ++A E+T +VHG E    A       F+ ++          +    +   E++ G  L 
Sbjct: 300 YVLAEEVTRLVHGEEGLTAAKRITQSLFNGNLSDLTEADFAQLAQDGVPMVELATGADLQ 359

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
             +V +    S  +AR+ + SNAI IN    S+ +      D        L  GKKN+  
Sbjct: 360 QALVDSELQPSRGQARKTIASNAITINGEKQSDPEYTFTGADRLFGRYTLLRRGKKNY-- 417

Query: 414 CHLC 417
           C +C
Sbjct: 418 CLVC 421


>gi|238749409|ref|ZP_04610914.1| Tyrosyl-tRNA synthetase [Yersinia rohdei ATCC 43380]
 gi|238712064|gb|EEQ04277.1| Tyrosyl-tRNA synthetase [Yersinia rohdei ATCC 43380]
          Length = 428

 Score =  287 bits (734), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 157/390 (40%), Positives = 225/390 (57%), Gaps = 21/390 (5%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG ++ Y G+D TA SLH GHL  L+ L   Q 
Sbjct: 8   SNLIKQLQERGLVAQVTDEDALAERLAQGPISLYCGFDPTADSLHLGHLVPLLCLKRFQL 67

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+P++L+GG T +IGDPSF+   R++     + E +EKI+   S F+ +  G+  A+ 
Sbjct: 68  AGHRPVALVGGATGMIGDPSFKASERKLNTEDTVNEWVEKIRRQVSPFLDFDCGENSAIA 127

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQS-LSFLEFNYMILQAYDF 184
            NN  W   +  +  LR+IG  FSVN+M++ E+V+ RL R+ S +SF EF+Y +LQAYDF
Sbjct: 128 ANNYDWFGGMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDSGISFTEFSYNLLQAYDF 187

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K +   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 188 ACLNKAHGVALQIGGSDQWGNITSGIDLTRRLHQQQVFGLTVPLITKADGTKFGKTEGGA 247

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + +I+ +    K  GK    A+ +
Sbjct: 248 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEDINALEEEDKNSGK-APRAQYV 306

Query: 302 IATEITTMVHGRE--EAEKAATAAMECFDM---------SIHSQHMPTISISKDEVSRGM 350
           +A  +T MVHG E   A K  T ++   D+          +    MP+I     E++R  
Sbjct: 307 LAENVTGMVHGAEGLAAAKRITDSLFSGDLKEMTEADFAQLAQDGMPSI-----ELARDA 361

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKIN 380
            L   +V A    S  +AR  + SNA+ IN
Sbjct: 362 DLQQALVNAELVPSRGQARTMINSNAVAIN 391


>gi|296877134|ref|ZP_06901174.1| tyrosine--tRNA ligase [Streptococcus parasanguinis ATCC 15912]
 gi|322390724|ref|ZP_08064236.1| tyrosine--tRNA ligase [Streptococcus parasanguinis ATCC 903]
 gi|296431654|gb|EFH17461.1| tyrosine--tRNA ligase [Streptococcus parasanguinis ATCC 15912]
 gi|321142551|gb|EFX38017.1| tyrosine--tRNA ligase [Streptococcus parasanguinis ATCC 903]
          Length = 428

 Score =  286 bits (733), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 155/414 (37%), Positives = 230/414 (55%), Gaps = 15/414 (3%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L ERG + Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  GHKP 
Sbjct: 17  LKERGLVFQTTDEEALRKALEEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAGHKPY 76

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+D  R +   + +QE +  I+G  S F+ +  G   A M+NN  W
Sbjct: 77  ALVGGATGLIGDPSFKDAERSLQTKETVQEWVRSIQGQLSRFLDFENGDNKAEMVNNYDW 136

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
             SI +ID LR++G +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF  L + +
Sbjct: 137 FGSISFIDFLRDVGKYFTVNAMMSKESVKKRI--ETGISYTEFAYQIMQGYDFYVLNQEH 194

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
           +  LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WLN + 
Sbjct: 195 NVTLQIGGSDQWGNMTAGTELMRRKADKTGHVMTVPLITDATGKKFGKSEGNAVWLNADK 254

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATEITTM 309
           TSPY  +Q+W N+ DAD V F K  T L + EI+ + K      +E  A+KI+A E+ T+
Sbjct: 255 TSPYEMYQFWMNVMDADAVRFLKIFTFLSLDEIEEIRKQFEAAPHERLAQKILAREVVTL 314

Query: 310 VHGREEAEKAATAAMECFDMSIHS-------QHMPTISISKDEVSRGMGLLTLIVKAGFA 362
           VHG E  ++A     + F  +I +       Q +  +   + +    + ++ L+V AG  
Sbjct: 315 VHGEEAYKEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVQAEDNLNIVELLVTAGVV 374

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN--IKLSFGKKNHIIC 414
            S  +AR  +++ AI +N   I +  L   L D D   N    +  GKK + + 
Sbjct: 375 NSKRQAREDVQNGAIYVNGERIQD--LDYVLSDSDKLENELTVIRRGKKKYFVL 426


>gi|157693371|ref|YP_001487833.1| tyrosyl-tRNA synthetase [Bacillus pumilus SAFR-032]
 gi|189083642|sp|A8FGA6|SYY_BACP2 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|157682129|gb|ABV63273.1| tyrosine--tRNA ligase [Bacillus pumilus SAFR-032]
          Length = 422

 Score =  286 bits (733), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 160/420 (38%), Positives = 240/420 (57%), Gaps = 13/420 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S  +  LS RG I Q ++   L  L ++  +  Y G+D TA SLH GHL  ++ L   Q+
Sbjct: 2   SQLMEELSFRGLIQQQTDEEGLTKLLAEEKIKLYSGFDPTADSLHIGHLLPILTLRRFQE 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH PI+L+GG T +IGDPSF+   R +  ++ ++   +KIKG  S F+ +  G+  A++
Sbjct: 62  AGHHPIALVGGATGLIGDPSFKKAERSLNPAEIVEHWSDKIKGQLSQFLDFEAGENPAVI 121

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  W+  +  I  LR+IG  F VN ML+ + V SR+  E  +S+ EF+Y+ILQ+ DF+
Sbjct: 122 VNNYDWISQMNVITFLRDIGKNFGVNFMLAKDIVSSRI--ETGISYTEFSYVILQSLDFL 179

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKLFALTSPLLTTASGTKMGKTLSG 243
            L +N +C+LQ+GGSDQWGNI  G++L  + +    K F LT PL+T A GTK GKT  G
Sbjct: 180 NLYRNENCKLQIGGSDQWGNITSGLELIRKSEAEGAKAFGLTMPLVTKADGTKFGKTEGG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM-AKLQ-GKEINEAKKI 301
           AIWL+KE TSPY F+Q+W N DD DVV + K  T L   EI     K+Q   E  EA++ 
Sbjct: 240 AIWLDKEKTSPYEFYQFWINTDDRDVVKYLKYFTFLSKEEIASYEEKVQTAPEKREAQRR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV-------SRGMGLLT 354
           +A E+TT+VHGRE  E+A   +   F   I S     + +   +V       +  + L+ 
Sbjct: 300 LAEEVTTLVHGRESLEQAVNISNALFKGEIKSLSAEEVKVGFKDVPSMEKSSTEELTLVD 359

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           L+V++  + S  +AR  + + A+ IN    +++   +  +D        L  GKK + + 
Sbjct: 360 LLVESKLSPSKRQAREDITNGAVSINGERQTDKDYVLSAEDRIENQFTVLRRGKKKYFLV 419


>gi|312868159|ref|ZP_07728363.1| tyrosine--tRNA ligase [Streptococcus parasanguinis F0405]
 gi|311096563|gb|EFQ54803.1| tyrosine--tRNA ligase [Streptococcus parasanguinis F0405]
          Length = 418

 Score =  286 bits (733), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 155/414 (37%), Positives = 230/414 (55%), Gaps = 15/414 (3%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L ERG + Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  GHKP 
Sbjct: 7   LKERGLVFQTTDEEALRKALEEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAGHKPY 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+D  R +   + +QE +  I+G  S F+ +  G   A M+NN  W
Sbjct: 67  ALVGGATGLIGDPSFKDAERSLQTKETVQEWVRSIQGQLSRFLDFENGDNKAEMVNNYDW 126

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
             SI +ID LR++G +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF  L + +
Sbjct: 127 FGSISFIDFLRDVGKYFTVNAMMSKESVKKRI--ETGISYTEFAYQIMQGYDFYVLNQEH 184

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
           +  LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WLN + 
Sbjct: 185 NVTLQIGGSDQWGNMTAGTELMRRKADKTGHVMTVPLITDATGKKFGKSEGNAVWLNADK 244

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATEITTM 309
           TSPY  +Q+W N+ DAD V F K  T L + EI+ + K      +E  A+KI+A E+ T+
Sbjct: 245 TSPYEMYQFWMNVMDADAVRFLKIFTFLSLDEIEEIRKQFEAAPHERLAQKILAREVVTL 304

Query: 310 VHGREEAEKAATAAMECFDMSIHS-------QHMPTISISKDEVSRGMGLLTLIVKAGFA 362
           VHG E  ++A     + F  +I +       Q +  +   + +    + ++ L+V AG  
Sbjct: 305 VHGEEAYKEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVQAEDNLNIVELLVTAGVV 364

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN--IKLSFGKKNHIIC 414
            S  +AR  +++ AI +N   I +  L   L D D   N    +  GKK + + 
Sbjct: 365 NSKRQAREDVQNGAIYVNGERIQD--LDYVLSDSDKLENELTVIRRGKKKYFVL 416


>gi|309378318|emb|CBX23064.1| unnamed protein product [Neisseria lactamica Y92-1009]
          Length = 431

 Score =  286 bits (733), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 156/380 (41%), Positives = 222/380 (58%), Gaps = 14/380 (3%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I Q ++   LD L ++  +  Y G+D TA SLH GHL  ++ L   Q+ GH PI
Sbjct: 7   LQSRGLIAQTTDIEALDALLNEQKIALYCGFDPTADSLHIGHLLPVLALRRFQQAGHTPI 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+   R +  ++ +   +E I+   + F+ +  G   A+M NN  W
Sbjct: 67  ALVGGATGMIGDPSFKAVERSLNSAETVAGWVESIRSQLTPFLSFEGGNA-AIMANNADW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQS-LSFLEFNYMILQAYDFVELAKN 190
              +  +D LR+IG  FSVN ML+ ESV+ R+ R+ + +SF EF Y +LQ YDF EL K 
Sbjct: 126 FGKMNCLDFLRDIGKHFSVNAMLNKESVKQRIDRDGAGISFTEFAYSLLQGYDFAELNKR 185

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKE 250
           +   L++GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  GA+WLN +
Sbjct: 186 HGAVLEIGGSDQWGNITAGIDLTRRLHQKQVFGLTLPLVTKSDGTKFGKTEGGAVWLNAK 245

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKIIATEIT 307
            TSPY F+Q+W  + DADV  F K  T L + EID +    K  G +  EA++I+A E+T
Sbjct: 246 KTSPYQFYQFWLKVADADVYKFLKYFTFLSIEEIDAVEAKDKASGSK-PEAQRILAEEMT 304

Query: 308 TMVHGREEAEKAATAAMECFDMSIHS-------QHMPTISISKDEVSRGMGLLTLIVKAG 360
            ++HG E A +AA    E       S       + +    +   EVS G+ ++  +VK G
Sbjct: 305 RLIHG-EAALQAAQRISESLFAEDQSRLTESDFEQLALDGLPAFEVSDGINVVEALVKTG 363

Query: 361 FATSTNEARRHLKSNAIKIN 380
            A+S  EAR  + S A+ +N
Sbjct: 364 LASSNKEARGFVNSKAVLLN 383


>gi|239828058|ref|YP_002950682.1| tyrosyl-tRNA synthetase [Geobacillus sp. WCH70]
 gi|239808351|gb|ACS25416.1| tyrosyl-tRNA synthetase [Geobacillus sp. WCH70]
          Length = 419

 Score =  286 bits (733), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 160/401 (39%), Positives = 232/401 (57%), Gaps = 26/401 (6%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D L  L  RG I+Q+++   L  L ++  VT Y G+D TA SLH GHL  ++ L   Q  
Sbjct: 2   DLLQELEWRGLINQVTDKEGLQKLLNEEKVTLYSGFDPTADSLHIGHLLPILTLRRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI+L+GG T +IGDPS +   R +   + +Q+  E+IK   S F+ +   +  A + 
Sbjct: 62  GHRPIALVGGATGLIGDPSGKKSERTLNAKETVQQWSERIKEQLSRFLDFDAKENPAKIA 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W+ S+  I  LR++G  F +N ML+ ESV+SR+  E  +SF EF+YMILQ+ DF++
Sbjct: 122 NNYDWIGSLDVITFLRDVGKNFGLNYMLAKESVQSRI--ETGISFTEFSYMILQSLDFLK 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASGTKMGKTLSGAI 245
           L +N  CRLQ+GGSDQWGNI  G++L  + +   K F LT PL+T A GTK GKT SGAI
Sbjct: 180 LYQNEQCRLQIGGSDQWGNITAGLELIRKTEGDAKAFGLTVPLVTKADGTKFGKTESGAI 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIA 303
           WL++E TSPY F+Q+W N DD DV+ + K  T L   EI+ + K   +  E   A+K +A
Sbjct: 240 WLDREKTSPYEFYQFWINTDDRDVIKYLKYFTFLSKEEIEELEKQLQKAPEQRAAQKALA 299

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLL 353
            E+T +VHG E  ++A   +   F  S+            + +P+     +EV     L+
Sbjct: 300 EEMTKLVHGEEALKQAIRISEALFSGSVSQLTAEEIEQGFKDVPSFEYKGEEVP----LV 355

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKIN-------NSIISNE 387
            L+V A    S  +AR  + + AI IN       N++I+ E
Sbjct: 356 ELLVMAKIVPSKRQAREDITNGAIYINGERIQDVNAVITKE 396


>gi|319940289|ref|ZP_08014641.1| tyrosyl-tRNA synthetase [Streptococcus anginosus 1_2_62CV]
 gi|319810591|gb|EFW06927.1| tyrosyl-tRNA synthetase [Streptococcus anginosus 1_2_62CV]
          Length = 418

 Score =  286 bits (733), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 153/417 (36%), Positives = 230/417 (55%), Gaps = 21/417 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L ERG + Q ++   L    ++G V+ Y GYD TA SLH GHL  ++++  LQ  GHKP 
Sbjct: 7   LKERGLVFQTTDEEALRKALAEGNVSFYSGYDPTADSLHLGHLVPILVMKHLQLAGHKPY 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+D  R +     ++  +  I+   S F+ +  G   A M+NN  W
Sbjct: 67  ALVGGATGLIGDPSFKDTERSLQTKDTVEGWVRSIQAQVSRFLDFENGDNKAEMVNNYDW 126

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
              I +ID LR++G +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF EL + Y
Sbjct: 127 FSDISFIDFLRDVGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFFELNRRY 184

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
              LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WLN + 
Sbjct: 185 GVTLQIGGSDQWGNMTAGTELLRRKADKTAHVITVPLITDATGKKFGKSEGNAVWLNADK 244

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATEITTM 309
           TSPY  +Q+W N+ DAD V F K  T LP+ EI+ + K      +E  A+KI+A E+ T+
Sbjct: 245 TSPYEMYQFWMNVMDADAVRFLKIFTLLPLDEIEEIGKQFEAAPHERLAQKILAREVVTL 304

Query: 310 VHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIVKA 359
           VHG +  ++A     + F  +I +          + +P   +  D+    + ++ L+V A
Sbjct: 305 VHGEKAYKEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVKADD---NLNIVELLVTA 361

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN--IKLSFGKKNHIIC 414
               S  +AR  +++ AI +N   I +  L   L D D   N    +  GKK + + 
Sbjct: 362 SVVNSKRQAREDVQNGAIYVNGDRIQD--LDYTLTDADKLENELTVIRRGKKKYFVL 416


>gi|257419462|ref|ZP_05596456.1| tyrosyl-tRNA synthetase [Enterococcus faecalis T11]
 gi|257161290|gb|EEU91250.1| tyrosyl-tRNA synthetase [Enterococcus faecalis T11]
          Length = 420

 Score =  286 bits (733), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 153/387 (39%), Positives = 222/387 (57%), Gaps = 17/387 (4%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S F   L  RG ++Q+++   L    ++  V  YIG+D TA SLH GHL  +++L   Q+
Sbjct: 3   SAFFEELKARGLVYQVTDEEALQKQLNEESVKLYIGFDPTADSLHIGHLLPILMLRRFQQ 62

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH PI+L+GGGT +IGDPSF+D  R +     ++   E IKG  S FI +   K  A++
Sbjct: 63  NGHVPIALVGGGTGMIGDPSFKDAERSLNTLDTVKAWSESIKGQLSRFIDFEDEKNPAIL 122

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
            NN  WL  +  ID LR++G  F++N M+S ESV+ R+  E  +S+ EF Y +LQAYDF+
Sbjct: 123 ANNYDWLGGLSLIDFLRDVGKNFTINYMMSKESVKRRI--ETGISYTEFAYQLLQAYDFL 180

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           +L +   C LQ+GGSDQWGNI  GI+L  R +  + F LT PL+T A GTK GKT   A+
Sbjct: 181 KLYETEGCLLQLGGSDQWGNITSGIELLRREQEVQGFGLTMPLITKADGTKFGKTEGNAV 240

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIA 303
           WL+ E TSPY F+Q+W N DD DVV F K  T L + EI  + +          A+K +A
Sbjct: 241 WLDAEKTSPYEFYQFWINTDDRDVVKFLKYFTFLTLDEIATIEEEFTANPGQRAAQKALA 300

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLL 353
            E+TT+VHG+    +A   +   F   I S          + +PT  +  ++    + L+
Sbjct: 301 KEVTTLVHGKAAYHQAVKISEALFSGDIQSLTAEEIKQGFKDVPTYEVQPED---QLSLV 357

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKIN 380
            L+V +    S  +AR  +++ AI +N
Sbjct: 358 DLLVTSKIEPSKRQAREDVQNGAIYVN 384


>gi|307710186|ref|ZP_07646630.1| tyrosyl-tRNA synthetase [Streptococcus mitis SK564]
 gi|307619166|gb|EFN98298.1| tyrosyl-tRNA synthetase [Streptococcus mitis SK564]
          Length = 418

 Score =  286 bits (733), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 157/417 (37%), Positives = 231/417 (55%), Gaps = 21/417 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L ERG I Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  GHKP 
Sbjct: 7   LKERGLIFQTTDEEALRKALEEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAGHKPY 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+D  R +     +   ++ I+G  S F+ +  G+  A+M+NN  W
Sbjct: 67  ALVGGATGLIGDPSFKDAERSLQTKDTVNGWVKSIQGQLSRFLDFENGENKAVMVNNYDW 126

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
             SI +ID LR+IG +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF  L +++
Sbjct: 127 FGSISFIDFLRDIGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFFVLNQDH 184

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
           +  LQ+GGSDQWGN+  G +L  R      + +T PL+T A+G K GK+   A+WLN E 
Sbjct: 185 NVTLQIGGSDQWGNMTAGTELLRRKADKTGYVITVPLITDATGKKFGKSEGNAVWLNPEK 244

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATEITTM 309
           TSPY  +Q+W N+ DAD V F K  T L + EI+ + K      +E  A+K++A E+ T+
Sbjct: 245 TSPYEMYQFWMNVMDADAVRFLKIFTFLSLDEIEDIRKQFEAAPHERLAQKVLAREVVTL 304

Query: 310 VHGREEAEKAATAAMECFDMSIHSQH----------MPTISISKDEVSRGMGLLTLIVKA 359
           VHG E  ++A     + F  +I +            +P   +  DE      ++ L+V +
Sbjct: 305 VHGEEAYKEALNITEQLFAGNIKNLSVKELKQGLLGVPNYHVQADE---DHNIVELLVSS 361

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN--IKLSFGKKNHIIC 414
           G   S  +AR  +++ AI +N   I N  L   L D D   N    +  GKK + + 
Sbjct: 362 GVVNSKRQAREDVQNGAIYVNGDRIQN--LDYVLSDADKLENELTVIRRGKKKYFVL 416


>gi|326796181|ref|YP_004314001.1| tyrosyl-tRNA synthetase [Marinomonas mediterranea MMB-1]
 gi|326546945|gb|ADZ92165.1| Tyrosyl-tRNA synthetase [Marinomonas mediterranea MMB-1]
          Length = 434

 Score =  286 bits (733), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 155/389 (39%), Positives = 222/389 (57%), Gaps = 15/389 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +D L+ L  RG I Q++   EL      G  T Y G+D TA SLH GHL  L++L   Q 
Sbjct: 6   NDLLADLQARGLIAQMTAEEELRAHLETGSRTLYCGFDPTADSLHLGHLVPLLVLKRFQD 65

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH PI+L+GG T +IGDPSF+   R++  +  +   ++KI+G  S F+++      A +
Sbjct: 66  AGHNPIALVGGATGLIGDPSFKAAERQLNTADVVAGWVDKIRGQVSQFVQFDEVTNPARV 125

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQS-LSFLEFNYMILQAYDF 184
           +NN  W   +  +D LREIG  FSVN M++ ESV+ RL RE + +SF EF+Y +LQ  DF
Sbjct: 126 VNNLDWAGEMNVLDFLREIGKHFSVNAMINKESVQQRLNREGAGISFTEFSYALLQGMDF 185

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
            EL + Y C LQ+GGSDQWGNI+ GIDL  R    ++F LT PL+T + GTK GKT SGA
Sbjct: 186 AELNRAYGCTLQIGGSDQWGNIVGGIDLSRRQNQSQVFGLTVPLVTKSDGTKFGKTESGA 245

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN--EAKKII 302
           +WL+ + TS Y F+Q+W N  DADV  F K  T L M EID + +   +     + + I+
Sbjct: 246 VWLDPKKTSQYAFYQFWMNTADADVYKFLKYFTFLTMEEIDAIEQADKESTGKPQGQSIL 305

Query: 303 ATEITTMVHGREEAEKAATAAMECF----------DM-SIHSQHMPTISISKDEVSRGMG 351
           A E T +VHG E    A       F          D+  I    +P+ S+ +  ++    
Sbjct: 306 AREATKLVHGEEGLAAAERITQALFSGKADQLSEQDLEQIKLDGLPSSSLVEANLAE-TP 364

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKIN 380
           L +L+ +AG A S  + +  L+ N++ +N
Sbjct: 365 LTSLLAEAGLAASGKQVKDALQRNSVFVN 393


>gi|312147778|gb|ADQ30437.1| tyrosyl-tRNA synthetase [Borrelia burgdorferi JD1]
          Length = 405

 Score =  286 bits (733), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 154/401 (38%), Positives = 237/401 (59%), Gaps = 7/401 (1%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           LS+L +R F+ Q ++ + L  L  +  +  Y G D T+SSLH GHL   + +  L++ GH
Sbjct: 5   LSLLHKRRFLKQCTSLKVLSDLMDREKIVFYAGVDATSSSLHIGHLIPFLAMMHLRQHGH 64

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
            PI L+G  T+ IGDPS + E R+++ S+EI  N   IK       K+    T    ++N
Sbjct: 65  MPIVLIGDSTAKIGDPSGKSEMRKILSSEEIGNNALLIKNQLQRITKF----TSECFIHN 120

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL ++ YI+ LR++G  FSVNRMLSFE+ + R+  +  LSF+EFNY +LQ+YD+  L 
Sbjct: 121 SNWLDNLNYIEFLRDVGMHFSVNRMLSFETYKRRM--DFGLSFIEFNYQLLQSYDYYMLN 178

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
           K  +CRLQ+GG DQWGNII G+DL  +    + F LT PL+T + G KMGK+  GA++L+
Sbjct: 179 KIKNCRLQIGGDDQWGNIISGVDLIRKKNGSETFGLTFPLITRSDGKKMGKSEKGAVYLD 238

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITT 308
             + S Y+F+QY+RN  D+DV +F    T L   EI+ ++  +G  +N+AK+I+A EIT 
Sbjct: 239 SNLFSIYDFYQYFRNTSDSDVKTFLYLFTFLEEDEIELISNFKGNSLNKAKEILAFEITK 298

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
           +VHG  EA K   A+   F  S    ++P    S   +   + L+ L++ +    S +E 
Sbjct: 299 IVHGEAEALKVQEASFAAFRGSGDRSNIPFFKFSFSSLKEEILLVDLMLDSKIVPSKSEG 358

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
           RR + S  + IN   + ++   +  +DF++   ++L  GKK
Sbjct: 359 RRLIDSGGVYINGKRVESQSHLLTKKDFNNN-EVELRVGKK 398


>gi|238919992|ref|YP_002933507.1| tyrosyl-tRNA synthetase [Edwardsiella ictaluri 93-146]
 gi|238869561|gb|ACR69272.1| tyrosyl-tRNA synthetase, putative [Edwardsiella ictaluri 93-146]
          Length = 428

 Score =  286 bits (732), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 158/427 (37%), Positives = 233/427 (54%), Gaps = 23/427 (5%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 8   SNLIKQLQERGLVAQVTDEEALAERLAQGSIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 67

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +Q  ++KI+   + F+ +  G   A+ 
Sbjct: 68  AGHKPVALVGGATGLIGDPSFKATERKLNTEETVQGWVDKIRHQVAPFLDFDCGSNSAIA 127

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYDF 184
            NN  W   +  +  LR+IG  FSVN+M++ E+V+ RL R+   +SF EF+Y +LQ YDF
Sbjct: 128 ANNYDWFGGMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDVGISFTEFSYNLLQGYDF 187

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L + +   LQ+GGSDQWGNI  GIDL  R+   +++ LT PL+T A GTK GKT  GA
Sbjct: 188 ASLNRMHGVELQIGGSDQWGNITSGIDLTRRMNQQQVWGLTVPLITKADGTKFGKTEGGA 247

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+ +    K  GK    A+ +
Sbjct: 248 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMDIEEINALEEEDKTSGK-APRAQYV 306

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIH-----------SQHMPTISISKDEVSRGM 350
           +A  +T +VHG    E A       F  S+               MP I     E+ +G 
Sbjct: 307 LAEAVTRLVHGEAGLEAAKRITHSLFSGSLSEMTEADFAQLAQDGMPMI-----EMDKGA 361

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            L   +V A    S  +AR+ + SNA+ +N    S+ +      D   +    L  GKKN
Sbjct: 362 DLQQALVDAELQPSRGQARKTIASNAVTVNGEKQSDPEYTFSDGDRLFSRYTLLRRGKKN 421

Query: 411 HIICHLC 417
           +  C +C
Sbjct: 422 Y--CLIC 426


>gi|285808478|gb|ADC36002.1| putative tyrosyl-tRNA synthetase [uncultured bacterium 259]
          Length = 421

 Score =  286 bits (732), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 151/421 (35%), Positives = 237/421 (56%), Gaps = 14/421 (3%)

Query: 7   DFLSILSERGFIHQ-ISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           D  S L  RG ++      RE     + G +T YIG+D TASSLH G L  +M L  LQ+
Sbjct: 2   DLYSELEWRGMLYDGTEGVREA---LAAGPITGYIGFDPTASSLHVGSLLTIMGLARLQR 58

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH PI+++GGGT +IGDPS + + R ++ S++++ N++ I+   + F+ +      A +
Sbjct: 59  AGHSPIAIVGGGTGLIGDPSGKTQERTLLSSEQVEANVQGIRAQLARFLDFDRPGNPARI 118

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  WL  +  +  LR++G  F+VN M++ +SV+ RL+ E  +SF EF+Y+++Q+YD V
Sbjct: 119 VNNADWLVPMDLMSFLRDVGKHFTVNYMIAKDSVKRRLESEDGISFTEFSYLLMQSYDVV 178

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L   Y C LQMGGSDQWGNI  GIDL  +L+  K   L  PL+TT++G K GKT +G +
Sbjct: 179 MLFDRYQCTLQMGGSDQWGNITAGIDLLRKLRGAKGHGLVWPLMTTSAGVKFGKTEAGTV 238

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTL--PMSEIDRMAKLQGKEINEAKKIIA 303
           WL+  +TSP+ F+Q+W N DD D + + K  T L     +    A  Q  E  EA++ +A
Sbjct: 239 WLDAALTSPFRFYQFWLNTDDRDAIRYLKLFTFLDRDAIDALAAAVAQHPERREAQRALA 298

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV--------SRGMGLLTL 355
             +TT VHG +  ++A  AA   F  +I   ++  + +  ++         + GM L  +
Sbjct: 299 RAVTTAVHGDDHVQRAERAAEVLFAENIADANVDDVLMVFEDAPSSDLFLPAEGMPLAEM 358

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +       S +EA R LKS  + +NN   ++E+ ++   D        L  G+K+H I  
Sbjct: 359 LATVKLVPSKSEAMRLLKSGGVYVNNVRATDERARLTAADAIGGALFVLRKGRKDHHIVR 418

Query: 416 L 416
           +
Sbjct: 419 V 419


>gi|312172321|emb|CBX80578.1| Tyrosyl-tRNA synthetase [Erwinia amylovora ATCC BAA-2158]
          Length = 425

 Score =  286 bits (732), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 158/416 (37%), Positives = 235/416 (56%), Gaps = 11/416 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q 
Sbjct: 4   SNLIKQLQERGLVAQVTDENALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQD 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++  S  + + +EKI+   + F+ +  G   A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTSDTVSDWVEKIRQQVAPFLDFNCGDNSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDF 184
            NN  W  S+  +  LR+IG  FSVN+M++ E+V+ RL R +Q +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGSMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDQGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L + +   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  GA
Sbjct: 184 ACLNERHGVALQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKSDGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + M +I+ +    K  GK    A+ +
Sbjct: 244 VWLDAKKTSPYKFYQFWINTADADVYRFLKFFTFMSMEDINALEQEDKNSGK-APRAQIV 302

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS-ISKD-----EVSRGMGLLTL 355
           +A  +T +VHG E    A       F  S+       ++ +++D     E+  G  L   
Sbjct: 303 LAELVTRLVHGEEGLTAAQRITQSLFAGSVTELTAQDLAQLAQDGMPGVELEAGQDLQQA 362

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           +V A  A S  +AR+ +++ +I IN S+ ++ +      D        L  GKKN+
Sbjct: 363 LVNAELAPSRGQARKLIEAKSISINGSLQTDAEYAFAENDRLFGQFTLLRRGKKNY 418


>gi|297180680|gb|ADI16889.1| tyrosyl-tRNA synthetase [uncultured gamma proteobacterium
           HF0010_16J05]
          Length = 427

 Score =  286 bits (732), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 162/422 (38%), Positives = 241/422 (57%), Gaps = 11/422 (2%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M   + + +     RG + QISN  +L +  S+   + Y G+D TA SLH G L  L+ L
Sbjct: 1   MEQIRENLIEEFGWRGLVFQISNKDKLALHLSE-ARSVYCGFDPTADSLHIGSLVPLLAL 59

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GH+PI L+GG T +IGDPS R + R + +   + + +EK++     F+ +  G 
Sbjct: 60  RRFQLAGHRPILLLGGATGLIGDPSGRADERNLNQHGTVAQWVEKLRTQVGRFLDF-DGA 118

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMIL 179
             A + NN  W   +  I  LR++G  FSVN M+  +SV++RL+RE Q +S+ EF+YM+L
Sbjct: 119 NAATVCNNLDWTQQLDVISFLRDVGKHFSVNAMVQRDSVKARLEREDQGISYTEFSYMLL 178

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK 239
           QA DF+ELA+   C LQ+GGSDQWGNII GIDL  R    + FALT PL+T A G+K GK
Sbjct: 179 QAMDFLELARREGCLLQIGGSDQWGNIISGIDLIRRHTGQEAFALTMPLVTKADGSKFGK 238

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI-DRMAK-LQGKEINE 297
           T SGA+WL+   TSPY+F+Q+W N  DAD+  F K  T +  +EI D +A+  Q  E   
Sbjct: 239 TASGAVWLDANKTSPYSFYQFWLNSSDADIEKFLKLFTFMSEAEIADLVARSQQALEQRL 298

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECF---DMSIHSQHMPTISIS---KDEVSRGMG 351
           A++ +A ++T +VHG +    A   +   F   + S+  + +  + +       VS G G
Sbjct: 299 AQRELARQVTELVHGEDAVTSAERISASLFGGDEASLQREDLKQLQLDGLPSVAVSPGDG 358

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           LL  +V  G A S+ EAR+ ++   +++N S + + KL +  +D        L  GKK H
Sbjct: 359 LLNTMVAVGAAKSSGEARKLIQGRGVRLNGSQVEDPKLAVVFEDAYFGEFFLLRKGKKQH 418

Query: 412 II 413
            +
Sbjct: 419 FL 420


>gi|325133486|gb|EGC56149.1| tyrosyl-tRNA synthetase [Neisseria meningitidis M13399]
 gi|325143735|gb|EGC66052.1| tyrosyl-tRNA synthetase [Neisseria meningitidis M01-240013]
 gi|325206751|gb|ADZ02204.1| tyrosyl-tRNA synthetase [Neisseria meningitidis M04-240196]
          Length = 431

 Score =  286 bits (732), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 155/380 (40%), Positives = 222/380 (58%), Gaps = 14/380 (3%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I Q ++   LD L ++  +  Y G+D TA SLH GHL  ++ L   Q+ GH PI
Sbjct: 7   LQSRGLIAQTTDIEALDALLNEQKIALYCGFDPTADSLHIGHLLPVLALRRFQQAGHTPI 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+   R +  ++ +   +E I+   + F+ +  G   A+M NN  W
Sbjct: 67  ALVGGATGMIGDPSFKAAERSLNSAETVAGWVESIRNQLTPFLSFEGGNA-AIMANNADW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQS-LSFLEFNYMILQAYDFVELAKN 190
             S+  +D LR+IG  FSVN ML+ ESV+ R+ R+ + +SF EF Y +LQ YDF EL K 
Sbjct: 126 FGSMNCLDFLRDIGKHFSVNAMLNKESVKQRIDRDGAGISFTEFAYSLLQGYDFAELNKR 185

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKE 250
           +   L++GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  GA+WLN +
Sbjct: 186 HGAVLEIGGSDQWGNITAGIDLTRRLNQKQVFGLTLPLVTKSDGTKFGKTEGGAVWLNAK 245

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKIIATEIT 307
            TSPY F+Q+W  + DADV  F K  T L + EID +    K  G +  EA++I+A E+T
Sbjct: 246 KTSPYQFYQFWLKVADADVYKFLKYFTFLSIEEIDAIEAKDKASGTK-PEAQRILAEEMT 304

Query: 308 TMVHGREEAEKAATAAMECFDMSIHS-------QHMPTISISKDEVSRGMGLLTLIVKAG 360
            ++HG E A +AA    E       S       + +    +   E+S G+  +  +VK G
Sbjct: 305 RLIHG-EAALQAAQRISESLFAEDQSSLTESDFEQLALDGLPVFEISDGINAVEALVKTG 363

Query: 361 FATSTNEARRHLKSNAIKIN 380
            A+S  EAR  + + A+ +N
Sbjct: 364 LASSNKEARGFVNAKAVLLN 383


>gi|292488183|ref|YP_003531065.1| tyrosyl-tRNA synthetase [Erwinia amylovora CFBP1430]
 gi|292899392|ref|YP_003538761.1| tyrosyl-tRNA synthetase [Erwinia amylovora ATCC 49946]
 gi|291199240|emb|CBJ46356.1| tyrosyl-tRNA synthetase [Erwinia amylovora ATCC 49946]
 gi|291553612|emb|CBA20657.1| Tyrosyl-tRNA synthetase [Erwinia amylovora CFBP1430]
          Length = 425

 Score =  286 bits (731), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 158/416 (37%), Positives = 235/416 (56%), Gaps = 11/416 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q 
Sbjct: 4   SNLIKQLQERGLVAQVTDENALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQD 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++  S  + + +EKI+   + F+ +  G   A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTSDTVSDWVEKIRQQVAPFLDFNCGDNSAMA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDF 184
            NN  W  S+  +  LR+IG  FSVN+M++ E+V+ RL R +Q +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGSMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDQGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L + +   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  GA
Sbjct: 184 ACLNERHGVALQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKSDGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + M +I+ +    K  GK    A+ +
Sbjct: 244 VWLDAKKTSPYKFYQFWINTADADVYRFLKFFTFMSMEDINALEQEDKNSGK-APRAQIV 302

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS-ISKD-----EVSRGMGLLTL 355
           +A  +T +VHG E    A       F  S+       ++ +++D     E+  G  L   
Sbjct: 303 LAELVTRLVHGEEGLTAARRITQSLFAGSVTELTAQDLAQLAQDGMPGVELEAGQDLQQA 362

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           +V A  A S  +AR+ +++ +I IN S+ ++ +      D        L  GKKN+
Sbjct: 363 LVNAELAPSRGQARKLIEAKSISINGSLQTDAEYAFAENDRLFGQFTLLRRGKKNY 418


>gi|225552404|ref|ZP_03773344.1| tyrosyl-tRNA synthetase [Borrelia sp. SV1]
 gi|225371402|gb|EEH00832.1| tyrosyl-tRNA synthetase [Borrelia sp. SV1]
          Length = 405

 Score =  286 bits (731), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 156/401 (38%), Positives = 235/401 (58%), Gaps = 7/401 (1%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           LS+L +RGF+ Q ++ + L  L  +  +  Y G D T+SSLH GHL   + +  L++ GH
Sbjct: 5   LSLLHKRGFLKQCTSLKVLSDLMDREKIVFYAGVDATSSSLHIGHLIPFLAMMHLRQHGH 64

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
            PI L+G  T+ IGDPS + E R+++ S+EI  N   IK       K+    T    ++N
Sbjct: 65  IPIVLIGDSTAKIGDPSGKSEMRKILSSEEIGNNALLIKNQLQRITKF----TSECFIHN 120

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL ++ YI+ LR+IG  FSVNRMLSFE+ + RL  +  LSF+EFNY +LQ+YD+  L 
Sbjct: 121 SNWLDNLNYIEFLRDIGMHFSVNRMLSFETYKRRL--DFGLSFIEFNYQLLQSYDYYMLN 178

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
           K  +CRLQ+GG DQWGNII G+DL  +    + F LT PL+T + G KMGKT  GA++L+
Sbjct: 179 KIKNCRLQIGGDDQWGNIISGVDLIRKKNRSETFGLTFPLITRSDGKKMGKTEKGAVYLD 238

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITT 308
             + S Y+F+QY+RN  D+DV +F    T L   EI+ ++  +   +N+AK+I+A EIT 
Sbjct: 239 SNLFSIYDFYQYFRNTSDSDVKTFLYLFTFLEEDEIELISNFKRNSLNKAKEILAFEITK 298

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
           +VHG  EA K   A+   F       ++P    S       + L+ L++ +    S +E 
Sbjct: 299 IVHGEAEALKVQEASFAAFRGGGDRSNIPFFKFSFSSPKEEILLVDLMLDSKIVPSKSEG 358

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
           RR + S  + IN   + ++   +  +DF++   ++L  GKK
Sbjct: 359 RRLIDSGGVYINGKRVESQSHLLTKKDFNNN-EVELRVGKK 398


>gi|257085018|ref|ZP_05579379.1| tyrosyl-tRNA synthetase [Enterococcus faecalis Fly1]
 gi|257422395|ref|ZP_05599385.1| tyrosyl-tRNA synthetase [Enterococcus faecalis X98]
 gi|256993048|gb|EEU80350.1| tyrosyl-tRNA synthetase [Enterococcus faecalis Fly1]
 gi|257164219|gb|EEU94179.1| tyrosyl-tRNA synthetase [Enterococcus faecalis X98]
 gi|315156112|gb|EFU00129.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0043]
 gi|315172203|gb|EFU16220.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX1346]
          Length = 420

 Score =  286 bits (731), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 154/389 (39%), Positives = 222/389 (57%), Gaps = 21/389 (5%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S F   L  RG ++Q+++   L    ++  V  YIG+D TA SLH GHL  +++L   Q+
Sbjct: 3   SAFFEELKARGLVYQVTDEEALQKQLNEESVKLYIGFDPTADSLHIGHLLPILMLRRFQQ 62

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH PI+L+GGGT +IGDPSF+D  R +     ++   E IKG  S FI +   K  A++
Sbjct: 63  NGHVPIALVGGGTGMIGDPSFKDAERSLNTLDTVKAWSESIKGQLSRFIDFEDEKNPAIL 122

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
            NN  WL  +  ID LR++G  F++N M+S ESV+ R+  E  +S+ EF Y +LQAYDF+
Sbjct: 123 ANNYDWLGELSLIDFLRDVGKNFTINYMMSKESVKRRI--ETGISYTEFAYQLLQAYDFL 180

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           +L +   C LQ+GGSDQWGNI  GI+L  R +  + F LT PL+T A GTK GKT   A+
Sbjct: 181 KLYETEGCLLQLGGSDQWGNITSGIELLRREQEVQGFGLTMPLITKADGTKFGKTEGNAV 240

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI----DRMAKLQGKEINEAKKI 301
           WL+ E TSPY F+Q+W N DD DVV F K  T L + EI    +      G+    A+K 
Sbjct: 241 WLDAEKTSPYEFYQFWINTDDRDVVKFLKYFTFLTLDEIATIEEEFTANPGQRA--AQKA 298

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMG 351
           +A E+TT+VHG     +A   +   F   I S          + +PT  +  ++    + 
Sbjct: 299 LAKEVTTLVHGEAAYHQAVKISEALFSGDIQSLTAEEIKQGFKDVPTYEVQPED---QLS 355

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKIN 380
           L+ L+V +    S  +AR  +++ AI +N
Sbjct: 356 LVDLLVTSKIEPSKRQAREDVQNGAIYVN 384


>gi|183598880|ref|ZP_02960373.1| hypothetical protein PROSTU_02315 [Providencia stuartii ATCC 25827]
 gi|188021088|gb|EDU59128.1| hypothetical protein PROSTU_02315 [Providencia stuartii ATCC 25827]
          Length = 424

 Score =  286 bits (731), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 151/390 (38%), Positives = 219/390 (56%), Gaps = 21/390 (5%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           ++ +  L ERG + Q+++   L    +QG ++ Y G+D TA SLH GHL  L+ L   Q 
Sbjct: 4   NNLIKQLQERGLVAQVTDEDALAERLAQGPISLYCGFDPTADSLHLGHLVPLLCLKRFQL 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++  ++ +QE +EKI+   S F+ +  G   A +
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKASERKLNTAETVQEWVEKIRNQVSPFLSFDCGDNSAKL 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYDF 184
            NN  W   +  +  LR+IG  FSVN+M++ E+V+ RL R+   +SF EF Y +LQ YDF
Sbjct: 124 ANNYDWFGKMDVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDVGISFTEFAYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K +   LQ+GGSDQWGNI  GIDL  RL   ++F +T PL+T + GTK GKT  GA
Sbjct: 184 ANLNKEHGVELQIGGSDQWGNITSGIDLTRRLNQNQVFGMTVPLITKSDGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + +SEID +    K  GK    A+ +
Sbjct: 244 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMELSEIDALEEEDKNSGK-APRAQYV 302

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS-----------QHMPTISISKDEVSRGM 350
           +A  +T +VHG E    A       F  ++               MP I++       G 
Sbjct: 303 LAENVTRLVHGEEGLAAARRITESLFSGAVSDLTEADFEQLAQDGMPCITLEN-----GA 357

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKIN 380
            L   +V +    S  +AR  + SNA+ +N
Sbjct: 358 DLQQALVDSELTPSRGQARTAISSNAVAVN 387


>gi|254673167|emb|CBA08020.1| Tyrosyl-tRNA synthetase [Neisseria meningitidis alpha275]
 gi|325135621|gb|EGC58238.1| tyrosyl-tRNA synthetase [Neisseria meningitidis M0579]
          Length = 431

 Score =  286 bits (731), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 156/380 (41%), Positives = 221/380 (58%), Gaps = 14/380 (3%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R  I Q ++   LD L ++  +  Y G+D TA SLH GHL  ++ L   Q+ GH PI
Sbjct: 7   LQSRDLIAQTTDIEALDALLNEQKIALYCGFDPTADSLHIGHLLPVLALRRFQQAGHTPI 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+   R +  ++ +   +E I+   + F+ +  G   A+M NN  W
Sbjct: 67  ALVGGATGMIGDPSFKAAERSLNSAETVAGWVESIRSQLTPFLSFEGGNA-AIMANNADW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQS-LSFLEFNYMILQAYDFVELAKN 190
              +  +D LR+IG  FSVN ML+ ESV+ R+ R+ + +SF EF Y +LQ YDF EL K 
Sbjct: 126 FGKMNCLDFLRDIGKHFSVNAMLNKESVKQRIDRDGAGISFTEFAYSLLQGYDFAELNKR 185

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKE 250
           +   L++GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  GA+WLN +
Sbjct: 186 HGAVLEIGGSDQWGNITAGIDLTRRLYQKQVFGLTLPLVTKSDGTKFGKTEGGAVWLNAK 245

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKIIATEIT 307
            TSPY F+Q+W  + DADV  F K  T L + EID +    K  G +  EA++I+A E+T
Sbjct: 246 KTSPYQFYQFWLKVADADVYKFLKYFTFLSIEEIDAIEAKDKASGSK-PEAQRILAEEMT 304

Query: 308 TMVHGREEAEKAATAAMECFDMSIHS-------QHMPTISISKDEVSRGMGLLTLIVKAG 360
            ++HG EEA  AA    E       S       + +    +   EVS G+ ++  +VK G
Sbjct: 305 RLIHG-EEALAAAQRISESLFAEDQSSLTESDFEQLALDGLPAFEVSDGINVVEALVKTG 363

Query: 361 FATSTNEARRHLKSNAIKIN 380
            A+S  EAR  + S A+ +N
Sbjct: 364 LASSNKEARGFVNSKAVLLN 383


>gi|271500224|ref|YP_003333249.1| tyrosyl-tRNA synthetase [Dickeya dadantii Ech586]
 gi|270343779|gb|ACZ76544.1| tyrosyl-tRNA synthetase [Dickeya dadantii Ech586]
          Length = 424

 Score =  286 bits (731), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 159/424 (37%), Positives = 233/424 (54%), Gaps = 17/424 (4%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q 
Sbjct: 3   SNLIQQLQERGLVAQVTDEGALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQM 62

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +QE +EKI+   + F+ +  G   A+ 
Sbjct: 63  AGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVEKIRRQVAPFLDFDCGTNSAIA 122

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYDF 184
            NN  W  S+  +  LR+IG  FSVN+M++ E+V+ RL R+   +SF EF+Y +LQ YDF
Sbjct: 123 ANNYDWFGSMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDVGISFTEFSYNLLQGYDF 182

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L   +   L++GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 183 ASLNALHGVELEIGGSDQWGNITSGIDLTRRLHQKQVFGLTVPLITKADGTKFGKTEGGA 242

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN-----EAK 299
           +WL+ + TSPY F+Q+W N  DADV  F K  T L   +ID +  L+ ++ N      A+
Sbjct: 243 VWLDPKKTSPYKFYQFWINTSDADVYRFLKFFTFL---DIDVINALEEEDKNSGVAPRAQ 299

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLL 353
            ++A E+T +VHG E    A       F+ ++          +    +   E++ G  L 
Sbjct: 300 YVLAEEVTRLVHGEEGLTAAKRITQSLFNGNLSDLTEADFAQLAQDGVPMVELATGADLQ 359

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
             +V +    S  +AR+ + SNAI IN     + +      D        L  GKKN+  
Sbjct: 360 QALVDSELQPSRGQARKTIASNAITINGEKQFDPEYTFTDADRLFGRYTLLRRGKKNY-- 417

Query: 414 CHLC 417
           C +C
Sbjct: 418 CLVC 421


>gi|240079959|ref|ZP_04724502.1| putative tyrosyl-tRNA synthase [Neisseria gonorrhoeae FA19]
 gi|240117199|ref|ZP_04731261.1| putative tyrosyl-tRNA synthase [Neisseria gonorrhoeae PID1]
 gi|268596100|ref|ZP_06130267.1| tyrosyl-tRNA synthetase [Neisseria gonorrhoeae FA19]
 gi|268602890|ref|ZP_06137057.1| tyrosyl-tRNA synthetase [Neisseria gonorrhoeae PID1]
 gi|268549888|gb|EEZ44907.1| tyrosyl-tRNA synthetase [Neisseria gonorrhoeae FA19]
 gi|268587021|gb|EEZ51697.1| tyrosyl-tRNA synthetase [Neisseria gonorrhoeae PID1]
          Length = 431

 Score =  286 bits (731), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 156/380 (41%), Positives = 220/380 (57%), Gaps = 14/380 (3%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I Q ++   LD L ++  +  Y G+D TA SLH GHL  ++ L   Q+ GH PI
Sbjct: 7   LQSRGLIAQTTDIEALDALLNEQKIALYCGFDPTADSLHIGHLLPVLALRRFQQAGHTPI 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+   R +  ++ +   +  I+   + F+ +  G   A+M NN  W
Sbjct: 67  ALVGGATGMIGDPSFKAAERSLNSAETVAGWVGSIRSQLTPFLSFEGGNA-AIMANNADW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQS-LSFLEFNYMILQAYDFVELAKN 190
             S+  +D LR+IG  FSVN ML+ ESV+ R+ R+ + +SF EF Y +LQ YDF EL K 
Sbjct: 126 FGSMNCLDFLRDIGKHFSVNAMLNKESVKQRIDRDGAGISFTEFAYSLLQGYDFAELNKR 185

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKE 250
           +   L++GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  GA+WLN +
Sbjct: 186 HGAVLEIGGSDQWGNITAGIDLTRRLNQKQVFGLTLPLVTKSDGTKFGKTEGGAVWLNAK 245

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKIIATEIT 307
            TSPY F+Q+W  + DADV  F K  T L + EID +    K  G +  EA++I+A E+T
Sbjct: 246 KTSPYQFYQFWLKVADADVYKFLKYFTFLSIEEIDAIEAKDKASGSK-PEAQRILAEEMT 304

Query: 308 TMVHGREEAEKAATAAMECFDMSIHS-------QHMPTISISKDEVSRGMGLLTLIVKAG 360
            ++HG EEA  AA    E       S       + +    +   EVS G+  +  +VK G
Sbjct: 305 RLIHG-EEALAAAQRISESLFAEDQSRLTESDFEQLALDGLPAFEVSDGINAVEALVKTG 363

Query: 361 FATSTNEARRHLKSNAIKIN 380
            A S  EAR  + + A+ +N
Sbjct: 364 LAASNKEARGFVNAKAVLLN 383


>gi|29376289|ref|NP_815443.1| tyrosyl-tRNA synthetase [Enterococcus faecalis V583]
 gi|227518928|ref|ZP_03948977.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0104]
 gi|227553547|ref|ZP_03983596.1| tyrosyl-tRNA synthetase [Enterococcus faecalis HH22]
 gi|229545650|ref|ZP_04434375.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX1322]
 gi|229549841|ref|ZP_04438566.1| tyrosyl-tRNA synthetase [Enterococcus faecalis ATCC 29200]
 gi|255972568|ref|ZP_05423154.1| tyrosyl-tRNA synthetase [Enterococcus faecalis T1]
 gi|255975679|ref|ZP_05426265.1| tyrosyl-tRNA synthetase [Enterococcus faecalis T2]
 gi|256619232|ref|ZP_05476078.1| tyrosyl-tRNA synthetase [Enterococcus faecalis ATCC 4200]
 gi|256762724|ref|ZP_05503304.1| tyrosyl-tRNA synthetase [Enterococcus faecalis T3]
 gi|256853292|ref|ZP_05558662.1| tyrosyl-tRNA synthetase 2 [Enterococcus faecalis T8]
 gi|256959147|ref|ZP_05563318.1| tyrosyl-tRNA synthetase [Enterococcus faecalis DS5]
 gi|256961758|ref|ZP_05565929.1| tyrosyl-tRNA synthetase [Enterococcus faecalis Merz96]
 gi|256964956|ref|ZP_05569127.1| tyrosyl-tRNA synthetase [Enterococcus faecalis HIP11704]
 gi|257079180|ref|ZP_05573541.1| tyrosyl-tRNA synthetase [Enterococcus faecalis JH1]
 gi|257082385|ref|ZP_05576746.1| tyrosyl-tRNA synthetase [Enterococcus faecalis E1Sol]
 gi|257087023|ref|ZP_05581384.1| tyrosyl-tRNA synthetase [Enterococcus faecalis D6]
 gi|257090052|ref|ZP_05584413.1| tyrosyl-tRNA synthetase [Enterococcus faecalis CH188]
 gi|257416258|ref|ZP_05593252.1| tyrosyl-tRNA synthetase [Enterococcus faecalis AR01/DG]
 gi|293383465|ref|ZP_06629378.1| tyrosine--tRNA ligase [Enterococcus faecalis R712]
 gi|293388881|ref|ZP_06633366.1| tyrosine--tRNA ligase [Enterococcus faecalis S613]
 gi|294779395|ref|ZP_06744796.1| tyrosine--tRNA ligase [Enterococcus faecalis PC1.1]
 gi|300860962|ref|ZP_07107049.1| tyrosine--tRNA ligase [Enterococcus faecalis TUSoD Ef11]
 gi|307269549|ref|ZP_07550888.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX4248]
 gi|307273052|ref|ZP_07554298.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0855]
 gi|307275801|ref|ZP_07556940.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX2134]
 gi|307277896|ref|ZP_07558980.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0860]
 gi|307289276|ref|ZP_07569232.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0109]
 gi|307291824|ref|ZP_07571695.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0411]
 gi|312901857|ref|ZP_07761122.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0470]
 gi|312903486|ref|ZP_07762666.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0635]
 gi|312907706|ref|ZP_07766697.1| tyrosyl-tRNA synthetase [Enterococcus faecalis DAPTO 512]
 gi|312910324|ref|ZP_07769171.1| tyrosyl-tRNA synthetase [Enterococcus faecalis DAPTO 516]
 gi|312951668|ref|ZP_07770563.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0102]
 gi|81436930|sp|Q834C7|SYY2_ENTFA RecName: Full=Tyrosyl-tRNA synthetase 2; AltName:
           Full=Tyrosine--tRNA ligase 2; Short=TyrRS 2
 gi|29343752|gb|AAO81513.1| tyrosyl-tRNA synthetase [Enterococcus faecalis V583]
 gi|227073617|gb|EEI11580.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0104]
 gi|227177325|gb|EEI58297.1| tyrosyl-tRNA synthetase [Enterococcus faecalis HH22]
 gi|229305110|gb|EEN71106.1| tyrosyl-tRNA synthetase [Enterococcus faecalis ATCC 29200]
 gi|229309218|gb|EEN75205.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX1322]
 gi|255963586|gb|EET96062.1| tyrosyl-tRNA synthetase [Enterococcus faecalis T1]
 gi|255968551|gb|EET99173.1| tyrosyl-tRNA synthetase [Enterococcus faecalis T2]
 gi|256598759|gb|EEU17935.1| tyrosyl-tRNA synthetase [Enterococcus faecalis ATCC 4200]
 gi|256683975|gb|EEU23670.1| tyrosyl-tRNA synthetase [Enterococcus faecalis T3]
 gi|256711751|gb|EEU26789.1| tyrosyl-tRNA synthetase 2 [Enterococcus faecalis T8]
 gi|256949643|gb|EEU66275.1| tyrosyl-tRNA synthetase [Enterococcus faecalis DS5]
 gi|256952254|gb|EEU68886.1| tyrosyl-tRNA synthetase [Enterococcus faecalis Merz96]
 gi|256955452|gb|EEU72084.1| tyrosyl-tRNA synthetase [Enterococcus faecalis HIP11704]
 gi|256987210|gb|EEU74512.1| tyrosyl-tRNA synthetase [Enterococcus faecalis JH1]
 gi|256990415|gb|EEU77717.1| tyrosyl-tRNA synthetase [Enterococcus faecalis E1Sol]
 gi|256995053|gb|EEU82355.1| tyrosyl-tRNA synthetase [Enterococcus faecalis D6]
 gi|256998864|gb|EEU85384.1| tyrosyl-tRNA synthetase [Enterococcus faecalis CH188]
 gi|257158086|gb|EEU88046.1| tyrosyl-tRNA synthetase [Enterococcus faecalis ARO1/DG]
 gi|291079256|gb|EFE16620.1| tyrosine--tRNA ligase [Enterococcus faecalis R712]
 gi|291081662|gb|EFE18625.1| tyrosine--tRNA ligase [Enterococcus faecalis S613]
 gi|294453524|gb|EFG21925.1| tyrosine--tRNA ligase [Enterococcus faecalis PC1.1]
 gi|295113116|emb|CBL31753.1| tyrosyl-tRNA synthetase [Enterococcus sp. 7L76]
 gi|300850001|gb|EFK77751.1| tyrosine--tRNA ligase [Enterococcus faecalis TUSoD Ef11]
 gi|306497090|gb|EFM66636.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0411]
 gi|306499985|gb|EFM69346.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0109]
 gi|306505293|gb|EFM74479.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0860]
 gi|306507493|gb|EFM76624.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX2134]
 gi|306510037|gb|EFM79061.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0855]
 gi|306514169|gb|EFM82745.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX4248]
 gi|310626734|gb|EFQ10017.1| tyrosyl-tRNA synthetase [Enterococcus faecalis DAPTO 512]
 gi|310630385|gb|EFQ13668.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0102]
 gi|310633362|gb|EFQ16645.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0635]
 gi|311289597|gb|EFQ68153.1| tyrosyl-tRNA synthetase [Enterococcus faecalis DAPTO 516]
 gi|311291050|gb|EFQ69606.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0470]
 gi|315027894|gb|EFT39826.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX2137]
 gi|315029529|gb|EFT41461.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX4000]
 gi|315032002|gb|EFT43934.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0017]
 gi|315037150|gb|EFT49082.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0027]
 gi|315144977|gb|EFT88993.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX2141]
 gi|315147433|gb|EFT91449.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX4244]
 gi|315149853|gb|EFT93869.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0012]
 gi|315152311|gb|EFT96327.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0031]
 gi|315158246|gb|EFU02263.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0312]
 gi|315162444|gb|EFU06461.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0645]
 gi|315163890|gb|EFU07907.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX1302]
 gi|315167302|gb|EFU11319.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX1341]
 gi|315169629|gb|EFU13646.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX1342]
 gi|315576051|gb|EFU88242.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0309B]
 gi|315577818|gb|EFU90009.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0630]
 gi|315580626|gb|EFU92817.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0309A]
 gi|323480896|gb|ADX80335.1| tyrosyl-tRNA synthetase [Enterococcus faecalis 62]
 gi|327535302|gb|AEA94136.1| tyrosine--tRNA ligase [Enterococcus faecalis OG1RF]
 gi|329571864|gb|EGG53542.1| tyrosine--tRNA ligase [Enterococcus faecalis TX1467]
          Length = 420

 Score =  286 bits (731), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 154/389 (39%), Positives = 222/389 (57%), Gaps = 21/389 (5%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S F   L  RG ++Q+++   L    ++  V  YIG+D TA SLH GHL  +++L   Q+
Sbjct: 3   SAFFEELKARGLVYQVTDEEALQKQLNEESVKLYIGFDPTADSLHIGHLLPILMLRRFQQ 62

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH PI+L+GGGT +IGDPSF+D  R +     ++   E IKG  S FI +   K  A++
Sbjct: 63  NGHVPIALVGGGTGMIGDPSFKDAERSLNTLDTVKAWSESIKGQLSRFIDFEDEKNPAIL 122

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
            NN  WL  +  ID LR++G  F++N M+S ESV+ R+  E  +S+ EF Y +LQAYDF+
Sbjct: 123 ANNYDWLGELSLIDFLRDVGKNFTINYMMSKESVKRRI--ETGISYTEFAYQLLQAYDFL 180

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           +L +   C LQ+GGSDQWGNI  GI+L  R +  + F LT PL+T A GTK GKT   A+
Sbjct: 181 KLYETEGCLLQLGGSDQWGNITSGIELLRREQEVQGFGLTMPLITKADGTKFGKTEGNAV 240

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI----DRMAKLQGKEINEAKKI 301
           WL+ E TSPY F+Q+W N DD DVV F K  T L + EI    +      G+    A+K 
Sbjct: 241 WLDAEKTSPYEFYQFWINTDDRDVVKFLKYFTFLTLDEIATIEEEFTANPGQRA--AQKA 298

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMG 351
           +A E+TT+VHG     +A   +   F   I S          + +PT  +  ++    + 
Sbjct: 299 LAKEVTTLVHGEAAYHQAVKISEALFSGDIQSLTAEEIKQGFKDVPTYEVQPED---QLS 355

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKIN 380
           L+ L+V +    S  +AR  +++ AI +N
Sbjct: 356 LVDLLVTSKIEPSKRQAREDVQNGAIYVN 384


>gi|261393182|emb|CAX50800.1| tyrosyl-tRNA synthetase (tyrosine--tRNA ligase; TyrRS) [Neisseria
           meningitidis 8013]
          Length = 431

 Score =  286 bits (731), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 155/380 (40%), Positives = 221/380 (58%), Gaps = 14/380 (3%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I Q ++   LD L ++  +  Y G+D TA SLH GHL  ++ L   Q+ GH PI
Sbjct: 7   LQSRGLIAQTTDIEALDALLNEQKIALYCGFDPTADSLHIGHLLPVLALRRFQQAGHTPI 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+   R +  ++ +   +E I+   + F+ +  G   A+M NN  W
Sbjct: 67  ALVGGATGMIGDPSFKAAERSLNSAETVAGWVESIRNQLTPFLSFEGGNA-AIMANNADW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQS-LSFLEFNYMILQAYDFVELAKN 190
             S+  +D LR+IG  FSVN ML+ ESV+ R+ R+ + +SF EF Y +LQ YDF EL K 
Sbjct: 126 FGSMNCLDFLRDIGKHFSVNAMLNKESVKQRIDRDGAGISFTEFAYSLLQGYDFAELNKR 185

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKE 250
           +   L++GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  GA+WLN +
Sbjct: 186 HGAVLEIGGSDQWGNITAGIDLTRRLNQKQVFGLTLPLVTKSDGTKFGKTEGGAVWLNAK 245

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKIIATEIT 307
            TSPY F+Q+W  + DADV  F K  T L + EID +    K  G +  EA++I+A E+T
Sbjct: 246 KTSPYQFYQFWLKVADADVYKFLKYFTFLSIEEIDAIEAKDKASGTK-PEAQRILAEEMT 304

Query: 308 TMVHGREEAEKAATAAMECFDMSIHS-------QHMPTISISKDEVSRGMGLLTLIVKAG 360
            ++HG E A +AA    E       S       + +    +   E+S G+  +  +VK G
Sbjct: 305 RLIHG-EAALQAAQRISESLFAEDQSSLTESDFEQLALDGLPVFEISDGINAVEALVKTG 363

Query: 361 FATSTNEARRHLKSNAIKIN 380
            A S  EAR  + + A+ +N
Sbjct: 364 LAASNKEARGFVNAKAVLLN 383


>gi|322386312|ref|ZP_08059943.1| tyrosine--tRNA ligase [Streptococcus cristatus ATCC 51100]
 gi|321269679|gb|EFX52608.1| tyrosine--tRNA ligase [Streptococcus cristatus ATCC 51100]
          Length = 418

 Score =  286 bits (731), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 155/417 (37%), Positives = 232/417 (55%), Gaps = 21/417 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L ERG I Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  GHKP 
Sbjct: 7   LQERGLIFQTTDEEALRKALEEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAGHKPY 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+D  R +   + +   ++ I+G  S F+ +  G+  A+M+NN  W
Sbjct: 67  ALVGGATGLIGDPSFKDAERSLQTKETVDGWVQSIQGQLSRFLDFENGENKAVMVNNYDW 126

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
             SI +ID LR++G +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF  L K +
Sbjct: 127 FGSISFIDFLRDVGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFFVLNKEH 184

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
           +  LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WLN E 
Sbjct: 185 NVTLQIGGSDQWGNMTAGTELLRRKADKTGHVITVPLITDATGKKFGKSEGNAVWLNPEK 244

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATEITTM 309
           TSPY  +Q+W N+ DAD + F K  T L + EI+ + K      +E  A+KI+A E+ T+
Sbjct: 245 TSPYEMYQFWMNVMDADAIRFLKIFTFLSLDEIEDIRKQFEAAPHERLAQKILAREVVTL 304

Query: 310 VHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIVKA 359
           VHG E  ++A     + F  +I +          + +P   +  DE    + ++ ++V +
Sbjct: 305 VHGEEAYKEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVQADE---NLNIVEILVSS 361

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN--IKLSFGKKNHIIC 414
           G   S  +AR  +++ AI +N   I +  L   L D D   N    +  GKK + + 
Sbjct: 362 GVVNSKRQAREDVQNGAIYVNGDRIQD--LDYVLGDADKLENELTVIRRGKKKYFVL 416


>gi|290475488|ref|YP_003468376.1| tyrosine tRNA synthetase [Xenorhabdus bovienii SS-2004]
 gi|289174809|emb|CBJ81610.1| tyrosine tRNA synthetase [Xenorhabdus bovienii SS-2004]
          Length = 428

 Score =  286 bits (731), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 155/392 (39%), Positives = 224/392 (57%), Gaps = 21/392 (5%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           F ++ +  L +RG + Q+++   L    +QG V+ Y G+D TA SLH GHL  L+ L   
Sbjct: 6   FSNNLIKQLQDRGLVAQVTDEEALAERLAQGPVSLYCGFDPTADSLHLGHLVPLLCLKRF 65

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q TGHKPI+L+GG T +IGDPSF+   R++   + ++E +EKI+   S F+ +  G+  A
Sbjct: 66  QLTGHKPIALVGGATGLIGDPSFKATERKLNTEETVKEWVEKIRKQVSPFLDFDCGENRA 125

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAY 182
            + NN  W   +  +  LR+IG  FSVN+M++ E+V+ RL R+   +S+ EF+Y +LQ+Y
Sbjct: 126 EIANNYEWFGEMDVLTFLRDIGKHFSVNQMINREAVKQRLHRDDVGISYTEFSYNLLQSY 185

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DF  L   Y   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  
Sbjct: 186 DFANLNGKYGVELQIGGSDQWGNITSGIDLTRRLHQKQVFGLTVPLITKSDGTKFGKTEG 245

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAK 299
           GA+WL+ + TSPY F+Q+W +  DAD   F K  T + + EI+ +    K  GK    A+
Sbjct: 246 GAVWLDPKKTSPYKFYQFWISTADADAYRFLKFFTFMSIEEINALEEEDKNSGK-APRAQ 304

Query: 300 KIIATEITTMVHGREEAEKAATAAMECF----------DMSIHSQH-MPTISISKDEVSR 348
            ++A ++T MVHG      A       F          D++  +Q  MP I + KD    
Sbjct: 305 YVLAEQVTGMVHGEAGLAAAKRITNSLFSGIVADLTEEDLAQLAQDGMPAIELEKD---- 360

Query: 349 GMGLLTLIVKAGFATSTNEARRHLKSNAIKIN 380
              L   +V AG   S  +AR  + SNA+ IN
Sbjct: 361 -ADLQQALVTAGLVPSRGQARTMIGSNAVSIN 391


>gi|238753615|ref|ZP_04614977.1| Tyrosyl-tRNA synthetase [Yersinia ruckeri ATCC 29473]
 gi|238708167|gb|EEQ00523.1| Tyrosyl-tRNA synthetase [Yersinia ruckeri ATCC 29473]
          Length = 428

 Score =  286 bits (731), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 152/389 (39%), Positives = 221/389 (56%), Gaps = 19/389 (4%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG ++ Y G+D TA SLH GHL  L+ L   Q 
Sbjct: 8   SNLIKQLQERGLVAQVTDEDALAERLAQGPISLYCGFDPTADSLHLGHLVPLLCLKRFQL 67

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+P++L+GG T +IGDPSF+   R++  +  + E +EKI+   S F+ +      A+ 
Sbjct: 68  QGHRPVALVGGATGLIGDPSFKATERKLNTADTVNEWVEKIRHQVSPFLDFDCRNNSAIT 127

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQS-LSFLEFNYMILQAYDF 184
            NN  W  ++  +  LR+IG  FSVN+M++ E+V+ RL R+ S +SF EF+Y +LQ YDF
Sbjct: 128 ANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDSGISFTEFSYNLLQGYDF 187

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K +   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 188 ACLNKEHGVELQIGGSDQWGNITSGIDLTRRLHQQQVFGLTVPLITKADGTKFGKTEGGA 247

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKII 302
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + +I+ + +      +   A+ ++
Sbjct: 248 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSLEDINALEEEDQNSGKAPRAQYVL 307

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIH-----------SQHMPTISISKDEVSRGMG 351
           A ++T MVHG      A       F   +H              MPTI     E++R   
Sbjct: 308 AEKVTGMVHGEAGLAAAKRITDSLFSGHLHEMTETDFAQLAQDGMPTI-----ELTRDAD 362

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKIN 380
           L   +V A  A S  +AR+ + SNA+ IN
Sbjct: 363 LQQALVNAELAPSRGQARKLIASNAVTIN 391


>gi|297561982|ref|YP_003680956.1| tyrosyl-tRNA synthetase [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
 gi|296846430|gb|ADH68450.1| tyrosyl-tRNA synthetase [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
          Length = 432

 Score =  285 bits (730), Expect = 7e-75,   Method: Compositional matrix adjust.
 Identities = 154/425 (36%), Positives = 246/425 (57%), Gaps = 22/425 (5%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +D +  L  RG + Q ++   L    + G +T Y G+D TA SLH GHLTQ++ L   Q+
Sbjct: 2   TDIIDELQWRGLLAQTTDLDALRKALADGPITLYCGFDPTAGSLHVGHLTQILTLARFQQ 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG-----TGK 120
            GH+PI+L+GGGT +IGDP    E R++   + ++  ++ + G  S+F+++         
Sbjct: 62  AGHRPIALVGGGTGLIGDPKPNAE-RQLNSLETVRGWVDNLGGQLSAFLRFTPEGEQPEP 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           TDA++ NN  WL  I  I+LLR++G  FSVN+ML+ E+VRSRL  E  +S+ EF+Y++LQ
Sbjct: 121 TDAVLANNADWLGEINAIELLRDVGKHFSVNQMLARETVRSRLDGE-GMSYTEFSYVLLQ 179

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL--KTP--KLFALTSPLLTTASGTK 236
           +YD+V+L + + C LQ GGSDQWGNI  G+DL  R+    P  +   LT+ LLT A GTK
Sbjct: 180 SYDYVQLYRRFGCTLQTGGSDQWGNITAGLDLVRRMDGNEPHGQAHGLTTNLLTKADGTK 239

Query: 237 MGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKE 294
            GKT SG++WL+ E+TSPY F+Q+W N DD DVV + K  +     EI+ + +   +  +
Sbjct: 240 FGKTESGSVWLDPELTSPYAFYQFWFNADDRDVVRYLKTFSFRDRDEIEELERQTEERPQ 299

Query: 295 INEAKKIIATEITTMVHGREEAEKAATAAMECF------DMSIHSQHMPTISISKDEVS- 347
              A++++A ++T +VHG EE  K   A++  F      D+   +       + + EV  
Sbjct: 300 ARAAQRVLAEDLTVLVHGEEECRKVKEASLALFGRADLSDLDARTLEAALAEVPRAEVDG 359

Query: 348 --RGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLS 405
              G+ +     ++G   S + ARR ++     +NN  +++ +  ++ +D      + L 
Sbjct: 360 PVDGLLVTDAFARSGLTPSKSAARRAIQEGGAYVNNVKVTDVEAVLRPEDVLQGRFVVLR 419

Query: 406 FGKKN 410
            GK+N
Sbjct: 420 KGKRN 424


>gi|269139039|ref|YP_003295740.1| tyrosyl-tRNA synthetase [Edwardsiella tarda EIB202]
 gi|267984700|gb|ACY84529.1| tyrosyl-tRNA synthetase [Edwardsiella tarda EIB202]
          Length = 424

 Score =  285 bits (729), Expect = 9e-75,   Method: Compositional matrix adjust.
 Identities = 156/422 (36%), Positives = 234/422 (55%), Gaps = 13/422 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 4   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +Q  ++KI+   + F+ +  G   A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKATERKLNTEETVQSWVDKIRRQVAPFLDFDCGSNSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYDF 184
            NN  W   +  +  LR+IG  FSVN+M++ E+V+ RL R+   +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGGMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDVGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L + +   LQ+GGSDQWGNI  GIDL  R+   +++ LT PL+T A GTK GKT  GA
Sbjct: 184 ASLNRMHGVELQIGGSDQWGNITSGIDLTRRMNQQQVWGLTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+ +    K  GK    A+ +
Sbjct: 244 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINALEDEDKNSGK-APRAQYV 302

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS-ISKD-----EVSRGMGLLTL 355
           +A  +T +VHG    E A       F  S+        + +++D     E+ +G  L   
Sbjct: 303 LAEAVTRLVHGEAGLEAAKRITHSLFSGSLSEMTEADFAQLAQDGMPMVEMDKGADLQQA 362

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +V A    S  +AR+ + SNA+ +N    S+ +      D        L  GKKN+  C 
Sbjct: 363 LVDAELQPSRGQARKTIASNAVTVNGEKQSDPEYTFSDGDRLFGRYTLLRRGKKNY--CL 420

Query: 416 LC 417
           +C
Sbjct: 421 IC 422


>gi|291617328|ref|YP_003520070.1| TyrS [Pantoea ananatis LMG 20103]
 gi|291152358|gb|ADD76942.1| TyrS [Pantoea ananatis LMG 20103]
 gi|327393773|dbj|BAK11195.1| tyrosyl-tRNA synthetase TyrS [Pantoea ananatis AJ13355]
          Length = 438

 Score =  285 bits (729), Expect = 9e-75,   Method: Compositional matrix adjust.
 Identities = 162/424 (38%), Positives = 237/424 (55%), Gaps = 23/424 (5%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG I Q+++   L    +QG ++ Y G+D TA SLH GHL  L+ L   Q 
Sbjct: 18  SNLIQQLQERGLIAQVTDEDALVEKLAQGPISLYCGFDPTADSLHLGHLVPLLCLKRFQD 77

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++  S+ + E +EKI+   + F+ +  G   A+ 
Sbjct: 78  AGHKPVALVGGATGLIGDPSFKAAERKLNTSETVGEWVEKIRTQVAPFLDFDCGANSAIA 137

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDF 184
            NN  W  ++  +  LR+IG  FSVN+M++ E+V+ RL R +Q +SF EF+Y +LQ YDF
Sbjct: 138 ANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDQGISFTEFSYNLLQGYDF 197

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L   +   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  GA
Sbjct: 198 ACLNALHGVSLQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKSDGTKFGKTEGGA 257

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE--INEAKKII 302
           +WL+ + TSPY F+Q+W N  DADV  F K  T L + EI  + +          A+ ++
Sbjct: 258 VWLDAKKTSPYKFYQFWINTADADVYRFLKFFTFLSIEEIHALEEEDKNSGTAPRAQYVL 317

Query: 303 ATEITTMVHGREEAEKAATAAMECF-----DMS------IHSQHMPTISISKDEVSRGMG 351
           A ++T +VHG E    A       F     DM+      +    MPTI++S ++      
Sbjct: 318 AEQVTRLVHGEEGLAAAKRITESLFSGALSDMTEADFEQLAQDGMPTITLSAED-----D 372

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN--IKLSFGKK 409
           L   +VKA    S  +AR  + SNA+ +N    S+   + +  D D   N    L  GKK
Sbjct: 373 LQQALVKAELVPSRGQARTMIGSNAVSLNGEKQSDA--EYRFSDSDKLFNRFTLLRRGKK 430

Query: 410 NHII 413
           ++ +
Sbjct: 431 HYCL 434


>gi|332971567|gb|EGK10517.1| tyrosine--tRNA ligase [Kingella kingae ATCC 23330]
          Length = 432

 Score =  285 bits (729), Expect = 9e-75,   Method: Compositional matrix adjust.
 Identities = 152/384 (39%), Positives = 223/384 (58%), Gaps = 12/384 (3%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I Q ++  EL  L     +  Y G+D TA SLH GHL  +++L   Q  GH P+
Sbjct: 8   LQARGLIAQTTDINELSKLLDSEKIALYCGFDPTADSLHIGHLLPVLVLRRFQNAGHTPV 67

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+   R +   + +   +  I+     F+K+  G   A+M NN  W
Sbjct: 68  ALVGGATGMIGDPSFKAVERSLNTPETVAGWVNSIRDQLKPFLKF-DGANPAIMENNANW 126

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDFVELAKN 190
             ++  +D LR+IG  FSVN ML+ ESV+ R++RE Q +SF EF+Y +LQ YDF EL K 
Sbjct: 127 FGAMNCLDFLRDIGKHFSVNAMLAKESVKQRIEREDQGISFTEFSYALLQGYDFAELNKR 186

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKE 250
           ++ +LQ+GGSDQWGNI  G +   RL    +  +T PL+T A GTK GKT  GA+WL+ +
Sbjct: 187 HNVQLQIGGSDQWGNITWGTETTRRLNQKSVHGMTLPLVTKADGTKFGKTEGGAVWLDAK 246

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKIIATEIT 307
            TSPYNF+Q+W  + DADV  F K  T L + +ID +    K  GK+  EA++I+A E+T
Sbjct: 247 KTSPYNFYQFWLKVADADVYKFLKYFTFLTVEQIDEIEANDKASGKK-PEAQRILAKEMT 305

Query: 308 TMVHGREEAEKAATAAMECF---DMSIHSQHMPTISIS---KDEVSRGMGLLTLIVKAGF 361
            ++HG    E A       F   +  +  Q    +++      EVS  + ++  +V+AG 
Sbjct: 306 RLIHGEAALEAAQRITQSLFSGDESGLTEQDYAQLALDGLPAFEVSGNLNVVEALVQAGL 365

Query: 362 ATSTNEARRHLKSNAIKINNSIIS 385
           A S  EAR  ++S A+ IN + ++
Sbjct: 366 AQSNKEARGFVQSGAVLINGTAVA 389


>gi|85059426|ref|YP_455128.1| tyrosyl-tRNA synthetase [Sodalis glossinidius str. 'morsitans']
 gi|97202004|sp|Q2NT02|SYY_SODGM RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|84779946|dbj|BAE74723.1| tyrosyl-tRNA synthase [Sodalis glossinidius str. 'morsitans']
          Length = 424

 Score =  285 bits (729), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 155/389 (39%), Positives = 223/389 (57%), Gaps = 19/389 (4%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG I Q+++ + L    + G +  Y G+D TA SLH GHL  L+ L   Q 
Sbjct: 4   SNLIQQLQERGLIAQVTDEKALAERLAAGPIALYCGFDPTADSLHLGHLVPLLCLKRFQL 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+P++L+GG T +IGDPSF+   R++  ++ +QE +EKIK   S F+ +  G   A+ 
Sbjct: 64  AGHRPVALVGGATGLIGDPSFKATERKLNTAETVQEWVEKIKRQVSPFLDFDCGDNSAVA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQS-LSFLEFNYMILQAYDF 184
            NN  W  S+  +  L +IG  FSVN+M++ E+V+ RL R+ S +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGSMNVLTFLLDIGKHFSVNQMINKEAVKQRLNRDDSGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K Y   LQ+GGSDQWGNI  GIDL  RL    ++ LT PL+T A GTK GKT  GA
Sbjct: 184 ACLNKQYGVALQIGGSDQWGNITSGIDLTRRLHQNTVYGLTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKII 302
           +WL+   TSPY F+Q+W N  D+DV  F K  T L ++ ID + +      +   A+ ++
Sbjct: 244 VWLDPSKTSPYKFYQFWINTADSDVYLFLKFFTFLDLAAIDALEQEDRASDKAPRAQYVL 303

Query: 303 ATEITTMVHGRE--EAEKAATAAM---ECFDMS------IHSQHMPTISISKDEVSRGMG 351
           A E+T MVHG +   A K  TA++      D++      +    MPT+ +      R   
Sbjct: 304 AEEVTRMVHGEQGLAAAKRITASLFSGALADLTEDDFAQLAQDGMPTVHL-----ERVAD 358

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKIN 380
           L   +V A    S  +AR  + SNA+ +N
Sbjct: 359 LQQALVAAELVPSRGQARTLISSNAVSVN 387


>gi|332198914|gb|EGJ12995.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae GA47901]
          Length = 418

 Score =  285 bits (729), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 157/417 (37%), Positives = 232/417 (55%), Gaps = 21/417 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L ERG I Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  GHKP 
Sbjct: 7   LKERGLIFQTTDEEALRKALEEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAGHKPY 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+D  R +     +   ++ I+G  S F+ +  G+  A+M+NN  W
Sbjct: 67  ALVGGATGLIGDPSFKDAERSLQTKDTVDGWVKSIQGQLSRFLDFENGENKAVMVNNYDW 126

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
             SI +ID LR+IG +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF  L +++
Sbjct: 127 FGSISFIDFLRDIGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFFVLNQDH 184

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
           +  LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   AIWLN E 
Sbjct: 185 NVTLQIGGSDQWGNMTAGTELLRRKADKTGHVITVPLITDATGKKFGKSEGNAIWLNPEK 244

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATEITTM 309
           TSPY  +Q+W N+ DAD V F K  T L + EI+ + K      +E  A+K++A E+ T+
Sbjct: 245 TSPYEMYQFWMNVMDADAVRFLKIFTFLSLDEIEDIRKQFEAAPHERLAQKVLAREVVTL 304

Query: 310 VHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIVKA 359
           VHG E  ++A     + F  +I +          + +P   +  DE +    ++ L+V +
Sbjct: 305 VHGEEAYKEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVQADENNN---IVELLVSS 361

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN--IKLSFGKKNHIIC 414
           G   S  +AR  +++ AI +N   I +  L   L D D   N    +  GKK + + 
Sbjct: 362 GIVNSKRQAREDVQNGAIYVNGDRIQD--LDYVLSDADKLENELTVIRRGKKKYFVL 416


>gi|322388579|ref|ZP_08062179.1| tyrosine--tRNA ligase [Streptococcus infantis ATCC 700779]
 gi|321140499|gb|EFX36004.1| tyrosine--tRNA ligase [Streptococcus infantis ATCC 700779]
          Length = 418

 Score =  285 bits (729), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 156/417 (37%), Positives = 231/417 (55%), Gaps = 21/417 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L ERG I Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  GHKP 
Sbjct: 7   LKERGLIFQTTDEEALRKALEEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAGHKPY 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+D  R +     +   ++ I+G  S F+ +  G+  A+M+NN  W
Sbjct: 67  ALVGGATGLIGDPSFKDAERSLQTKDTVDGWVKSIQGQLSRFLDFENGENKAVMVNNYDW 126

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
             SI +ID LR+IG +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF  L +++
Sbjct: 127 FGSISFIDFLRDIGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFFVLNQDH 184

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
           +  LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WLN E 
Sbjct: 185 NVTLQIGGSDQWGNMTAGTELMRRKADKTGHVITVPLITDATGKKFGKSEGNAVWLNPEK 244

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATEITTM 309
           TSPY  +Q+W N+ DAD V F K  T L + EI+ + K      +E  A+K++A E+ T+
Sbjct: 245 TSPYEMYQFWMNVMDADAVRFLKIFTFLSLDEIEDIRKQFEAAPHERLAQKVLAREVVTL 304

Query: 310 VHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIVKA 359
           VHG E  ++A     + F  +I +          + +P   +  DE      ++ L+V +
Sbjct: 305 VHGEEAYKEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVQADE---NHNIVELLVSS 361

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN--IKLSFGKKNHIIC 414
           G   S  +AR  +++ AI +N   I +  L   L D D   N    +  GKK + + 
Sbjct: 362 GVVNSKRQAREDVQNGAIYVNGDRIQD--LDYVLSDTDKLENELTVIRRGKKKYFVL 416


>gi|293364670|ref|ZP_06611391.1| tyrosine--tRNA ligase [Streptococcus oralis ATCC 35037]
 gi|307702926|ref|ZP_07639874.1| tyrosyl-tRNA synthetase [Streptococcus oralis ATCC 35037]
 gi|291316928|gb|EFE57360.1| tyrosine--tRNA ligase [Streptococcus oralis ATCC 35037]
 gi|307623606|gb|EFO02595.1| tyrosyl-tRNA synthetase [Streptococcus oralis ATCC 35037]
          Length = 418

 Score =  285 bits (729), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 155/417 (37%), Positives = 231/417 (55%), Gaps = 21/417 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L ERG I Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  GHKP 
Sbjct: 7   LKERGLIFQTTDEEALRKALEEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAGHKPY 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+D  R +     +   ++ I+G  S F+ +  G+  A+M+NN  W
Sbjct: 67  ALVGGATGLIGDPSFKDAERSLQTKDTVDGWVKSIQGQLSRFLDFENGENKAVMVNNYDW 126

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
             SI +ID LR++G +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF  L +++
Sbjct: 127 FGSISFIDFLRDVGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFFVLNQDH 184

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
           +  LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WLN E 
Sbjct: 185 NVTLQIGGSDQWGNMTAGTELLRRKADKTAHVITVPLITDATGKKFGKSEGNAVWLNPEK 244

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATEITTM 309
           TSPY  +Q+W N+ DAD V F K  T L + EI+ + K      +E  A+K++A E+ T+
Sbjct: 245 TSPYEMYQFWMNVMDADAVRFLKIFTFLSLDEIEDIRKQFEAAPHERLAQKVLAREVVTL 304

Query: 310 VHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIVKA 359
           VHG E  ++A     + F  +I +          + +P   +  DE      ++ L+V +
Sbjct: 305 VHGEEAYKEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVQADE---NHNIVELLVSS 361

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN--IKLSFGKKNHIIC 414
           G   S  +AR  +++ AI +N   I +  L   L D D   N    +  GKK + + 
Sbjct: 362 GVVNSKRQAREDVQNGAIYVNGDRIQD--LDYVLSDADKLENELTVIRRGKKKYFVL 416


>gi|15901915|ref|NP_346519.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae TIGR4]
 gi|15903951|ref|NP_359501.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae R6]
 gi|111657584|ref|ZP_01408321.1| hypothetical protein SpneT_02001219 [Streptococcus pneumoniae
           TIGR4]
 gi|116516055|ref|YP_817314.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae D39]
 gi|149002930|ref|ZP_01827841.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS69]
 gi|168484388|ref|ZP_02709340.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae CDC1873-00]
 gi|221232808|ref|YP_002511962.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae ATCC 700669]
 gi|225855587|ref|YP_002737099.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae JJA]
 gi|225857673|ref|YP_002739184.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae P1031]
 gi|237650579|ref|ZP_04524831.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae CCRI 1974]
 gi|237821719|ref|ZP_04597564.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae CCRI 1974M2]
 gi|81449400|sp|Q8DN52|SYY_STRR6 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|81531469|sp|Q97NE3|SYY_STRPN RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|122277840|sp|Q04I74|SYY_STRP2 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|254783644|sp|B8ZPM2|SYY_STRPJ RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|254783647|sp|C1CH28|SYY_STRZJ RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|254783648|sp|C1CN46|SYY_STRZP RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|14973611|gb|AAK76159.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae TIGR4]
 gi|15459605|gb|AAL00712.1| Tyrosyl-tRNA synthetase 1 [Streptococcus pneumoniae R6]
 gi|116076631|gb|ABJ54351.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae D39]
 gi|147758933|gb|EDK65928.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS69]
 gi|172042350|gb|EDT50396.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae CDC1873-00]
 gi|220675270|emb|CAR69863.1| putative tyrosyl-tRNA synthetase [Streptococcus pneumoniae ATCC
           700669]
 gi|225723386|gb|ACO19239.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae JJA]
 gi|225724666|gb|ACO20518.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae P1031]
 gi|332071369|gb|EGI81863.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae GA41301]
 gi|332198708|gb|EGJ12790.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae GA47368]
          Length = 418

 Score =  285 bits (729), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 156/417 (37%), Positives = 233/417 (55%), Gaps = 21/417 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L ERG I Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  GHKP 
Sbjct: 7   LKERGLIFQTTDEEALRKALEEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAGHKPY 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+D  R +     +   ++ I+G  S F+ +  G+  A+M+NN  W
Sbjct: 67  ALVGGATGLIGDPSFKDAERSLQTKDTVDGWVKSIQGQLSRFLDFENGENKAVMVNNYDW 126

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
             SI +ID LR+IG +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF  L +++
Sbjct: 127 FGSISFIDFLRDIGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFFVLNQDH 184

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
           +  LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WLN E 
Sbjct: 185 NVTLQIGGSDQWGNMTAGTELLRRKADKTGHVITVPLITDATGKKFGKSEGNAVWLNPEK 244

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATEITTM 309
           TSPY  +Q+W N+ DAD V F K  T L + EI+ + K      +E  A+K++A E+ T+
Sbjct: 245 TSPYEMYQFWMNVMDADAVRFLKIFTFLSLDEIEDIRKQFEAAPHERLAQKVLAREVVTL 304

Query: 310 VHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIVKA 359
           VHG E  ++A     + F  +I +          + +P   +  DE +    ++ L+V +
Sbjct: 305 VHGEEAYKEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVQADENN---NIVELLVSS 361

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN--IKLSFGKKNHIIC 414
           G   S  +AR  +++ AI +N   I  ++L   L D D   N    +  GKK + + 
Sbjct: 362 GIVNSKRQAREDVQNGAIYVNGDRI--QELDYVLSDADKLENELTVIRRGKKKYFVL 416


>gi|322378015|ref|ZP_08052502.1| tyrosine--tRNA ligase [Streptococcus sp. M334]
 gi|321280997|gb|EFX58010.1| tyrosine--tRNA ligase [Streptococcus sp. M334]
          Length = 418

 Score =  285 bits (729), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 157/417 (37%), Positives = 232/417 (55%), Gaps = 21/417 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L ERG I Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  GHKP 
Sbjct: 7   LKERGLIFQTTDEEALRKALEEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAGHKPY 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+D  R +     +   ++ I+G  S F+ +  G+  A+M+NN  W
Sbjct: 67  ALVGGATGLIGDPSFKDAERSLQTKDTVDGWVKSIQGQLSRFLDFENGENKAVMVNNYDW 126

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
             SI +ID LR+IG +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF  L +++
Sbjct: 127 FGSISFIDFLRDIGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFFVLNQDH 184

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
           +  LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WLN E 
Sbjct: 185 NVTLQIGGSDQWGNMTAGTELLRRKADKTGHVITVPLITDATGKKFGKSEGNAVWLNPEK 244

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATEITTM 309
           TSPY  +Q+W N+ DAD V F K  T L + EI+ + K      +E  A+KI+A E+ T+
Sbjct: 245 TSPYEMYQFWMNVMDADAVRFLKIFTFLSLDEIEDIRKQFEVAPHERLAQKILAREVVTL 304

Query: 310 VHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIVKA 359
           VHG E  ++A     + F  +I +          + +P   + +DE      ++ L+V +
Sbjct: 305 VHGEEAYKEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVQEDE---NHNIVELLVSS 361

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN--IKLSFGKKNHIIC 414
           G   S  +AR  +++ AI +N   I +  L   L D D   N    +  GKK + + 
Sbjct: 362 GVVNSKRQAREDVQNGAIYVNGDRIQD--LDYVLSDADKLENELTVIRRGKKKYFVL 416


>gi|254228073|ref|ZP_04921503.1| tyrosyl-tRNA synthetase [Vibrio sp. Ex25]
 gi|262395949|ref|YP_003287802.1| tyrosyl-tRNA synthetase [Vibrio sp. Ex25]
 gi|151939569|gb|EDN58397.1| tyrosyl-tRNA synthetase [Vibrio sp. Ex25]
 gi|262339543|gb|ACY53337.1| tyrosyl-tRNA synthetase [Vibrio sp. Ex25]
          Length = 419

 Score =  285 bits (728), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 157/407 (38%), Positives = 232/407 (57%), Gaps = 24/407 (5%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +  L  L +RG I Q S+  E+  L SQ   T Y G+D TA SLH GHL  L++L   Q 
Sbjct: 3   TPLLQDLQDRGLIAQASDLEEIQTLLSQ-PQTVYCGFDPTAGSLHIGHLVPLIMLKRFQD 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+ I+L+GG T +IGDPSF+   R +   + +   +  +       + +   K   +M
Sbjct: 62  AGHQAIALIGGATGMIGDPSFKATERSLNSKEIVSGWVNDLSNQIQQLMNHQLAKP-MIM 120

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDF 184
           +NN  W+ +I  ID  R++G  FS+N M++ ESV+ RL+R +Q +SF EF+Y +LQ+YDF
Sbjct: 121 VNNADWMKAINVIDFFRDVGKHFSINTMINRESVKQRLQRPDQGISFTEFSYALLQSYDF 180

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
            EL + YDCRLQ+GG+DQWGNI+ GIDL  R    ++F LT PL+T + G+K GKT  GA
Sbjct: 181 AELNRQYDCRLQIGGNDQWGNIVGGIDLTRRQNGEQVFGLTLPLITKSDGSKFGKTEGGA 240

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL----QGKEINEAKK 300
           +WL+   TSPY F+Q+W   +DADV  F +  T L   EI  +       QGK   +A++
Sbjct: 241 VWLDPSKTSPYAFYQFWLGAEDADVYHFLRYYTFLSCEEIASIEAQDQASQGKP--QAQR 298

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV----------SRGM 350
           I+A E+T  VHG E       A+ E    ++ S +M  +S+ + +           S   
Sbjct: 299 ILAEEMTRFVHGEE-----GLASAERITQALFSGNMQQLSLGELKQLELDGLPSIESAQQ 353

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
            L+ L+V++G A+S   AR H+ +NAI +N   +S +   +    FD
Sbjct: 354 DLVELLVESGLASSKRVAREHISNNAISVNGEKVSADNPSLSFPLFD 400


>gi|297180364|gb|ADI16581.1| tyrosyl-tRNA synthetase [uncultured gamma proteobacterium
           HF0010_01E20]
          Length = 426

 Score =  285 bits (728), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 167/424 (39%), Positives = 239/424 (56%), Gaps = 21/424 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           F+  L  RG + Q+S+ + L      G  + Y G+D TA SLH G L  L+ L   Q  G
Sbjct: 6   FMDELRWRGLLTQVSDEQGLIDYLDSGCQSLYCGFDPTADSLHVGSLVPLLALRRFQLQG 65

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK-TDALML 126
           H+P+ L+GG T +IGDPS RD  R +   + +    + ++   S F+++ +   T A ++
Sbjct: 66  HRPLLLLGGATGMIGDPSGRDNERSLNELETVSNWTQALREQVSGFLEFDSKDGTAAKIV 125

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDFV 185
           NN  W   +  ++ LR+IG  FSVN M+  +SV+SRL R  + +S+ EF+YM+LQA DF+
Sbjct: 126 NNLDWTRDLPVVEFLRDIGKHFSVNSMIQRDSVKSRLARTNEGISYTEFSYMLLQAMDFL 185

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            LA+N  C LQ+GGSDQWGNII GIDL  R      FA T PL+T A GTK GK+ +GA+
Sbjct: 186 RLAQNESCFLQIGGSDQWGNIISGIDLIRRYTGRSAFAFTMPLVTKADGTKFGKSAAGAV 245

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKKIIA 303
           W++   TS Y F+Q+W N  D DVV F K  T L  SEI  +    L   E+ EA+K +A
Sbjct: 246 WIDPRKTSQYVFYQFWLNTADEDVVKFLKLFTFLSQSEIQSLEVEVLDRPELREAQKKLA 305

Query: 304 TEITTMVHGREE--AEKAATAAMECFDMS---------IHSQHMPTISISKDEVSRGMGL 352
            E+TT+VHG++   A +  +AA+   D+          +    MP  S +      G GL
Sbjct: 306 QEVTTIVHGKQAVVAAERISAALFAGDIGQLLESDLRELQQDGMPCTSCAV-----GTGL 360

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN-H 411
           L +IV+AG   ST EAR+ +++N IK+N   I +    +  +D        L  GKKN H
Sbjct: 361 LAVIVEAGLTKSTGEARKLIQANGIKLNGDSIDDVGRGLTFEDALFKRFYLLRKGKKNYH 420

Query: 412 IICH 415
           +I  
Sbjct: 421 LITR 424


>gi|306828567|ref|ZP_07461762.1| tyrosine--tRNA ligase [Streptococcus mitis ATCC 6249]
 gi|304429366|gb|EFM32451.1| tyrosine--tRNA ligase [Streptococcus mitis ATCC 6249]
          Length = 418

 Score =  285 bits (728), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 156/417 (37%), Positives = 231/417 (55%), Gaps = 21/417 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L ERG I Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  GHKP 
Sbjct: 7   LKERGLIFQTTDEEALRKALEEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAGHKPY 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+D  R +     +   ++ I+G  S F+ +  G+  A+M+NN  W
Sbjct: 67  ALVGGATGLIGDPSFKDAERSLQTKDTVDGWVKSIQGQLSRFLDFENGENKAVMVNNYDW 126

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
             SI +ID LR+IG +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF  L +++
Sbjct: 127 FGSISFIDFLRDIGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFYVLNQDH 184

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
           +  LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WLN E 
Sbjct: 185 NVTLQIGGSDQWGNMTAGTELLRRKADKTGHVITVPLITDATGKKFGKSEGNAVWLNPEK 244

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATEITTM 309
           TSPY  +Q+W N+ DAD V F K  T L + EI+ + K      +E  A+K++A E+ T+
Sbjct: 245 TSPYEMYQFWMNVMDADAVRFLKIFTFLSLDEIEEIRKQFEAAPHERLAQKVLAREVVTL 304

Query: 310 VHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIVKA 359
           VHG E  ++A     + F  +I +          + +P   +  DE      ++ L+V +
Sbjct: 305 VHGEEAYKEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVQADE---NHNIVELLVSS 361

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN--IKLSFGKKNHIIC 414
           G   S  +AR  +++ AI +N   I +  L   L D D   N    +  GKK + + 
Sbjct: 362 GVVNSKRQAREDVQNGAIYVNGERIQD--LDYVLSDADKLENELTVIRRGKKKYFVL 416


>gi|192360287|ref|YP_001981399.1| tyrosyl-tRNA synthetase [Cellvibrio japonicus Ueda107]
 gi|190686452|gb|ACE84130.1| tyrosyl-tRNA synthetase [Cellvibrio japonicus Ueda107]
          Length = 435

 Score =  285 bits (728), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 151/396 (38%), Positives = 228/396 (57%), Gaps = 15/396 (3%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M +  + FL  L ERG I Q++    L    + G  T Y G+D TA SLH GHL  L+ L
Sbjct: 1   MTSIDTHFLQELQERGLIAQMTGGDSLAEHLNTGSRTLYSGFDPTADSLHIGHLVPLLAL 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GHKPI+L+GG T ++GDPSF+ + R++     +   +++++   S FI +  G 
Sbjct: 61  KRFQMAGHKPIALVGGATGLVGDPSFKAQERKLNTPDVVAGWVQRLQQQVSRFIDFDCGP 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMIL 179
             A ++NN  W+ ++  +  LR++G  FSVN M++ ESV+ R++RE + +SF EF YM+L
Sbjct: 121 NSAEVVNNLDWVGNMNVLSFLRDVGKHFSVNNMINKESVKQRIEREGEGISFTEFTYMLL 180

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK 239
           Q+YDF EL +   C LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GK
Sbjct: 181 QSYDFAELYQRRQCTLQIGGSDQWGNITGGIDLTRRLHGGQVFGLTMPLVTKADGTKFGK 240

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINE 297
           T +G +WL+   TSPY F+Q+W    DADV  F +  T L + EI R+  A +      +
Sbjct: 241 TETGTVWLDPVKTSPYAFYQFWLGAADADVYKFLRYFTFLHLDEIARIEAADVASGVKPQ 300

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFD-----------MSIHSQHMPTISISKDEV 346
           A++I+A ++T +VHG+   E A       F            + +    +PT  + + E 
Sbjct: 301 AQRILAEQMTELVHGKSGLEAAQRITQALFSDELSGLSESDFLQLQQDGLPTSRLVRAEF 360

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNS 382
           +  + L+ L+ +A  ATS  + +  L+ +A+ IN +
Sbjct: 361 A-SVSLIQLLTEAQLATSGKQVKDALQRSAVFINGA 395


>gi|301795027|emb|CBW37492.1| putative tyrosyl-tRNA synthetase [Streptococcus pneumoniae INV104]
          Length = 418

 Score =  285 bits (728), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 156/417 (37%), Positives = 232/417 (55%), Gaps = 21/417 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L ERG I Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  GHKP 
Sbjct: 7   LKERGLIFQTTDEEALRKALEEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAGHKPY 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+D  R +     +   ++ I+G  S F+ +  G+  A+M+NN  W
Sbjct: 67  ALVGGATGLIGDPSFKDAERSLQTKDTVDGWVKSIQGQLSRFLDFENGENKAVMVNNYDW 126

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
             SI +ID LR+IG +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF  L +++
Sbjct: 127 FGSISFIDFLRDIGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFFVLNQDH 184

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
           +  LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WLN E 
Sbjct: 185 NVTLQIGGSDQWGNMTAGTELLRRKADKTGHVITVPLITDATGKKFGKSEGNAVWLNPEK 244

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATEITTM 309
           TSPY  +Q+W N+ DAD V F K  T L + EI+ + K      +E  A+K++A E+ T+
Sbjct: 245 TSPYEMYQFWMNVMDADAVRFLKVFTFLSLDEIEDIRKQFEAAPHERLAQKVLAREVVTL 304

Query: 310 VHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIVKA 359
           VHG E  ++A     + F  +I +          + +P   +  DE +    ++ L+V +
Sbjct: 305 VHGEEAYKEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVQADENNN---IVELLVSS 361

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN--IKLSFGKKNHIIC 414
           G   S  +AR  +++ AI +N   I +  L   L D D   N    +  GKK + + 
Sbjct: 362 GIVNSKRQAREDVQNGAIYVNGDRIQD--LDYVLSDADKLENELTVIRRGKKKYFVL 416


>gi|89889440|ref|ZP_01200951.1| tyrosyl-tRNA synthetase [Flavobacteria bacterium BBFL7]
 gi|89517713|gb|EAS20369.1| tyrosyl-tRNA synthetase [Flavobacteria bacterium BBFL7]
          Length = 439

 Score =  285 bits (728), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 163/431 (37%), Positives = 245/431 (56%), Gaps = 28/431 (6%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F   L  RG IH I    E   L  + VVT YIG+D TA SLH G + Q++LL  LQ++
Sbjct: 11  NFAEELRWRGMIHDIMPGTEE--LLEKEVVTGYIGFDPTADSLHIGSMVQIILLMHLQRS 68

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY--GTGKTDAL 124
           GH+PI+L+GG T +IGDPS + + R ++  + + +NI  ++ + S FI +  G   T A+
Sbjct: 69  GHRPIALVGGATGMIGDPSGKSDERNLLTQEILDKNIAGVQSVLSRFIDFEKGDDATRAV 128

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYD 183
           ++NN  W+ +   ID  R++G   +VN M++ +SV+ R++ E + +SF EF Y + Q YD
Sbjct: 129 LVNNYDWMKNFSLIDFARDVGKHITVNYMMAKDSVKKRVQGEGEGMSFTEFTYQLFQGYD 188

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           +V L ++  C+LQ+GGSDQWGNI  G +L  R    K +ALT+PL+T A GTK GKT SG
Sbjct: 189 YVHLYEHMGCKLQIGGSDQWGNITTGTELVRRKLGGKAYALTTPLVTKADGTKFGKTESG 248

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPM----SEIDRMAKLQGKEINEAK 299
            IWL+ + TS Y F+Q+W N  D D V++ K  T L      S I+  AK  G  +   +
Sbjct: 249 NIWLDTDKTSVYKFFQFWINATDEDAVNWIKIFTFLDQQTCESLIEEHAKDPGYRV--LQ 306

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQH---------------MPTISISKD 344
           K +A E+T MVHGRE  E A  A+   F  ++  +                +P   ++KD
Sbjct: 307 KRLAEEVTVMVHGREAYEVALKASQILFSKTVTPEQWSEFNQETLLDIFEGVPQAEVAKD 366

Query: 345 EVSRGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
            +  G+  +TL+     F  S +E RR LK N++ IN + I+ E + I   D  +   + 
Sbjct: 367 ALKDGVDPVTLMADLTSFLPSNSEVRRALKENSLSINKNKINAETV-ITTDDLIADNMLL 425

Query: 404 LSFGKKNHIIC 414
           L  GK+N+ + 
Sbjct: 426 LQRGKRNYFLV 436


>gi|260061604|ref|YP_003194684.1| tyrosyl-tRNA synthetase [Robiginitalea biformata HTCC2501]
 gi|88785736|gb|EAR16905.1| tyrosyl-tRNA synthetase [Robiginitalea biformata HTCC2501]
          Length = 433

 Score =  285 bits (728), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 158/428 (36%), Positives = 237/428 (55%), Gaps = 23/428 (5%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           ++F+  L  RG +H +    E  +L   G+  AY+G D TA SLH GHL  +M+L   Q 
Sbjct: 3   TNFVKELEWRGMLHDVMPGTEEHLLS--GMQAAYVGIDPTADSLHIGHLVGVMMLRHFQM 60

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT-GKTDAL 124
            GHKPI L+GG T +IGDPS +   R ++    ++ N E IK   S F+ + +  +  A+
Sbjct: 61  AGHKPIGLVGGATGMIGDPSGKSAERNLLDETTLRMNQEAIKMQLSRFLDFESDAENAAV 120

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQAY 182
           ++NN  W+  I ++D +R++G   +VN M++ +SV+ R+  E  + +SF EF Y ++Q Y
Sbjct: 121 LVNNYDWMKDITFLDFIRDVGKHITVNYMMAKDSVKKRVSDESGEGMSFTEFTYQLVQGY 180

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DF+ L + Y+C LQMGGSDQWGNI  G +L  R+   K +ALT PL+T A GTK GKT S
Sbjct: 181 DFLHLYRKYNCTLQMGGSDQWGNITTGTELIRRIDGGKGYALTCPLITKADGTKFGKTES 240

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA--KLQGKEINEAKK 300
           G +WL+   TSPY F+QYW N  D D   + K  T L   EI+ +     +     E ++
Sbjct: 241 GNVWLDAHKTSPYKFYQYWLNTSDEDAEKYIKIFTFLSREEIEGLVAEHREAPHKRELQR 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDEV 346
            +A E+TTMVH R++ E A TA+   F  S                 + +P   +   ++
Sbjct: 301 RLAEELTTMVHSRQDLENAVTASSILFGKSTAESLRSLGEETFMEVFEGVPQCHLPIGDI 360

Query: 347 SRGMGLL-TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLS 405
             G+ ++  L  + GF  S  EA R LK NAI +N + + ++   I  +D  S   + L 
Sbjct: 361 ESGLDMVAALSARTGFLKSNGEALRELKQNAISVNKAKV-DDSYTITEKDLISGKFVLLQ 419

Query: 406 FGKKNHII 413
            GKKN+ +
Sbjct: 420 RGKKNYFV 427


>gi|328470193|gb|EGF41104.1| tyrosyl-tRNA synthetase [Vibrio parahaemolyticus 10329]
          Length = 419

 Score =  285 bits (728), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 155/408 (37%), Positives = 228/408 (55%), Gaps = 26/408 (6%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +  L  L +RG I Q S+  E+  L SQ   T Y G+D TA SLH GHL  L++L   Q 
Sbjct: 3   TPLLQDLQDRGLIAQASDLEEIQTLLSQ-PQTVYCGFDPTAGSLHIGHLVPLIMLKRFQD 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+ ++L+GG T +IGDPSF+   R +  ++ +   +  +       + +   K   +M
Sbjct: 62  AGHQAVALIGGATGMIGDPSFKATERSLNSAEIVSGWVNDLSNQIQQLMNHQLSKP-MIM 120

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDF 184
           +NN  W+ +I  ID  R++G  FS+N M++ ESV+ RL+R +Q +SF EF+Y +LQ+YDF
Sbjct: 121 VNNADWMRAINVIDFFRDVGKHFSINTMINRESVKQRLQRPDQGISFTEFSYALLQSYDF 180

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
            EL + Y CRLQ+GG+DQWGNI+ GIDL  R    ++F LT PL+T + GTK GKT  GA
Sbjct: 181 AELNRQYGCRLQIGGNDQWGNIVSGIDLTRRQNGEQVFGLTLPLITKSDGTKFGKTEGGA 240

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL----QGKEINEAKK 300
           +WL+   TSPY F+Q+W   +DADV  F +  T L   EI  +       QGK   +A++
Sbjct: 241 VWLDPSKTSPYAFYQFWLGAEDADVYHFLRYYTFLSYEEIASIEAQDQASQGKP--QAQR 298

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHS-----------QHMPTISISKDEVSRG 349
           I+A E+T  VHG E    A       F  ++               +P+I      VS  
Sbjct: 299 ILAEEMTRFVHGEEGLASAERITQALFSGNVQQLSLGELKQLELDGLPSI------VSAQ 352

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
             L+ L++++G A+S   AR H+ +NAI +N   +S +   +    FD
Sbjct: 353 QDLVELLIESGLASSKRVAREHISNNAISVNGEKVSADNPSLSFPLFD 400


>gi|327388836|gb|EGE87184.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae GA04375]
          Length = 415

 Score =  285 bits (728), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 157/413 (38%), Positives = 231/413 (55%), Gaps = 21/413 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L ERG I Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  GHKP 
Sbjct: 7   LKERGLIFQTTDEEALRKALEEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAGHKPY 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+D  R +     +   ++ I+G  S F+ +  G+  A+M+NN  W
Sbjct: 67  ALVGGATGLIGDPSFKDAERSLQTKDTVDGWVKSIQGQLSRFLDFENGENKAVMVNNYDW 126

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
             SI +ID LR+IG +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF  L +++
Sbjct: 127 FGSISFIDFLRDIGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFFVLNQDH 184

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
           +  LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WLN E 
Sbjct: 185 NVTLQIGGSDQWGNMTAGTELLRRKADKTGHVITVPLITDATGKKFGKSEGNAVWLNPEK 244

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATEITTM 309
           TSPY  +Q+W N+ DAD V F K  T L + EI+ + K      +E  A+K++A E+ T+
Sbjct: 245 TSPYEMYQFWMNVMDADAVRFLKIFTFLSLDEIEDIRKQFEAAPHERLAQKVLAREVVTL 304

Query: 310 VHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIVKA 359
           VHG E  ++A     + F  +I +          + +P   +  DE +    ++ L+V +
Sbjct: 305 VHGEEAYKEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVQADEHNN---IVELLVSS 361

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN--IKLSFGKKN 410
           G   S  +AR  +++ AI +N   I +  L   L D D   N    +  GKKN
Sbjct: 362 GIVNSKRQAREDVQNGAIYVNGDRIQD--LDYVLSDADKLENELTVIRRGKKN 412


>gi|89076033|ref|ZP_01162396.1| tyrosyl-tRNA synthetase [Photobacterium sp. SKA34]
 gi|89048268|gb|EAR53849.1| tyrosyl-tRNA synthetase [Photobacterium sp. SKA34]
          Length = 424

 Score =  285 bits (728), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 149/378 (39%), Positives = 219/378 (57%), Gaps = 9/378 (2%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG I QI++   L    ++G +T Y G+D TA SLH GHL  L+ L   Q+ GH P+
Sbjct: 10  LKDRGLIAQITDEEALSERLAKGPITLYCGFDPTADSLHLGHLVPLLCLKRFQEAGHNPV 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+   R +     +   + KI+   S F+ +      A M+NN  W
Sbjct: 70  ALVGGATGMIGDPSFKAAERSLNTLDTVSGWVTKIQRQVSPFLDFDNPTNPARMVNNHDW 129

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYDFVELAKN 190
             ++  +  LR+IG  FSVN+M+S ESV+ R+ R++  +SF EF Y +LQ+YDF  + K 
Sbjct: 130 FGNMDVLTFLRDIGKHFSVNQMISKESVKQRINRDEVGISFTEFAYSLLQSYDFASMNKE 189

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKE 250
               LQ+GGSDQWGNI  GIDL  R+   ++F +T PL+T + GTK GKT  GA+WL+  
Sbjct: 190 MGMELQIGGSDQWGNITAGIDLTRRMNQQQVFGMTVPLITKSDGTKFGKTEGGAVWLDPS 249

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIATEITT 308
            TSPY F+Q+W N  DADV  F    T L   EI ++        +  EA++I+A + T 
Sbjct: 250 KTSPYKFYQFWMNTADADVYRFLCFFTFLSEEEIQQIEDTDRNSGKAPEAQRILAEQATR 309

Query: 309 MVHGREEAEKAATAAMECFDMSI-HSQHMPTISISKD-----EVSRGMGLLTLIVKAGFA 362
           +VHG+E+ E A       F+  + H        +++D     E   G  L  ++VK+G A
Sbjct: 310 LVHGQEQLEAAQNITRCLFENDLAHLSESDFAQLAQDGMPSAEAENGDDLQQVLVKSGLA 369

Query: 363 TSTNEARRHLKSNAIKIN 380
           +S ++A+ H+ SNAI +N
Sbjct: 370 SSRSQAKTHISSNAIMVN 387


>gi|270291799|ref|ZP_06198015.1| tyrosine--tRNA ligase [Streptococcus sp. M143]
 gi|270279884|gb|EFA25725.1| tyrosine--tRNA ligase [Streptococcus sp. M143]
          Length = 418

 Score =  285 bits (728), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 155/417 (37%), Positives = 232/417 (55%), Gaps = 21/417 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L ERG I Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  GHKP 
Sbjct: 7   LKERGLIFQTTDEEALRKALEEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAGHKPY 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+D  R +     +   ++ I+G  S F+ +  G+  A+M+NN  W
Sbjct: 67  ALVGGATGLIGDPSFKDAERSLQTKDTVDGWVKSIQGQLSRFLDFENGENKAVMVNNYDW 126

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
             SI +ID LR++G +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF  L +++
Sbjct: 127 FGSISFIDFLRDVGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFFVLNQDH 184

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
           +  LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WLN E 
Sbjct: 185 NVTLQIGGSDQWGNMTAGTELLRRKADKTGHVITVPLITDATGKKFGKSEGNAVWLNPEK 244

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATEITTM 309
           TSPY  +Q+W N+ DAD V F K  T L + EI+ + K      +E  A+K++A E+ T+
Sbjct: 245 TSPYEMYQFWMNVMDADAVRFLKIFTFLSLDEIEDIRKQFEAAPHERLAQKVLAREVVTL 304

Query: 310 VHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIVKA 359
           VHG E  ++A     + F  +I +          + +P   +  DE      ++ L+V +
Sbjct: 305 VHGEEAYKEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVQADE---NHNIVELLVSS 361

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN--IKLSFGKKNHIIC 414
           G   S  +AR  +++ AI +N + I +  L   L D D   N    +  GKK + + 
Sbjct: 362 GVVNSKRQAREDVQNGAIYVNGNRIQD--LDYVLSDADKLDNELTVIRRGKKKYFVL 416


>gi|168486915|ref|ZP_02711423.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae CDC1087-00]
 gi|168494146|ref|ZP_02718289.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae CDC3059-06]
 gi|183570135|gb|EDT90663.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae CDC1087-00]
 gi|183575898|gb|EDT96426.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae CDC3059-06]
          Length = 418

 Score =  285 bits (728), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 156/417 (37%), Positives = 232/417 (55%), Gaps = 21/417 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L ERG I Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  GHKP 
Sbjct: 7   LKERGLIFQTTDEEALRKALEEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAGHKPY 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+D  R +     +   ++ I+G  S F+ +  G+  A+M+NN  W
Sbjct: 67  ALVGGATGLIGDPSFKDAERSLQTKDTVDGWVKSIQGQLSRFLDFENGENKAVMVNNYDW 126

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
             SI +ID LR+IG +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF  L +++
Sbjct: 127 FGSISFIDFLRDIGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFFVLNQDH 184

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
           +  LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WLN E 
Sbjct: 185 NVTLQIGGSDQWGNMTAGTELLRRKADKTGHVITVPLITDATGKKFGKSEGNAVWLNPEK 244

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATEITTM 309
           TSPY  +Q+W N+ DAD V F K  T L + EI+ + K      +E  A+K++A E+ T+
Sbjct: 245 TSPYEMYQFWMNVMDADAVRFLKIFTFLSLDEIEDIRKQFEAAPHERLAQKVLAREVVTL 304

Query: 310 VHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIVKA 359
           VHG E  ++A     + F  +I +          + +P   +  DE +    ++ L+V +
Sbjct: 305 VHGEESYKEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVQADEHN---NIVELLVSS 361

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN--IKLSFGKKNHIIC 414
           G   S  +AR  +++ AI +N   I +  L   L D D   N    +  GKK + + 
Sbjct: 362 GIVNSKRQAREDVQNGAIYVNGDRIQD--LDYVLSDADKLENELTVIRRGKKKYFVL 416


>gi|148984396|ref|ZP_01817684.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae SP3-BS71]
 gi|194398136|ref|YP_002038688.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae G54]
 gi|254783641|sp|B5E3A7|SYY_STRP4 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|147923173|gb|EDK74287.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae SP3-BS71]
 gi|194357803|gb|ACF56251.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae G54]
 gi|301800846|emb|CBW33503.1| putative tyrosyl-tRNA synthetase [Streptococcus pneumoniae OXC141]
          Length = 418

 Score =  284 bits (727), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 156/417 (37%), Positives = 232/417 (55%), Gaps = 21/417 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L ERG I Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  GHKP 
Sbjct: 7   LKERGLIFQTTDEEALRKALEEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAGHKPY 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+D  R +     +   ++ I+G  S F+ +  G+  A+M+NN  W
Sbjct: 67  ALVGGATGLIGDPSFKDAERSLQTKDTVDGWVKSIQGQLSRFLDFENGENKAVMVNNYDW 126

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
             SI +ID LR+IG +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF  L +++
Sbjct: 127 FGSISFIDFLRDIGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFFVLNQDH 184

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
           +  LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WLN E 
Sbjct: 185 NVTLQIGGSDQWGNMTAGTELLRRKADKTGHVITVPLITDATGKKFGKSEGNAVWLNPEK 244

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATEITTM 309
           TSPY  +Q+W N+ DAD V F K  T L + EI+ + K      +E  A+K++A E+ T+
Sbjct: 245 TSPYEMYQFWMNVMDADAVRFLKIFTFLSLDEIEDIRKQFEAAPHERLAQKVLAREVVTL 304

Query: 310 VHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIVKA 359
           VHG E  ++A     + F  +I +          + +P   +  DE +    ++ L+V +
Sbjct: 305 VHGEEAYKEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVQADENNN---IVELLVSS 361

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN--IKLSFGKKNHIIC 414
           G   S  +AR  +++ AI +N   I +  L   L D D   N    +  GKK + + 
Sbjct: 362 GIVNSKRQAREDVQNGAIYVNGDRIQD--LDYVLSDADKLENELTVIRRGKKKYFVL 416


>gi|315612023|ref|ZP_07886940.1| tyrosine--tRNA ligase [Streptococcus sanguinis ATCC 49296]
 gi|315315825|gb|EFU63860.1| tyrosine--tRNA ligase [Streptococcus sanguinis ATCC 49296]
          Length = 418

 Score =  284 bits (727), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 156/417 (37%), Positives = 231/417 (55%), Gaps = 21/417 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L ERG I Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  GHKP 
Sbjct: 7   LKERGLIFQTTDEEALRKALEEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAGHKPY 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+D  R +     ++  ++ I+G  S F+ +  G+  A+M+NN  W
Sbjct: 67  ALVGGATGLIGDPSFKDAERSLQTKDTVEGWVKSIQGQLSRFLDFENGENKAVMVNNYDW 126

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
             SI +ID LR+IG +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF  L + +
Sbjct: 127 FGSISFIDFLRDIGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFYVLNQEH 184

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
           +  LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WLN E 
Sbjct: 185 NVTLQIGGSDQWGNMTAGTELLRRKADKTGHVITVPLITDATGKKFGKSEGNAVWLNPEK 244

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATEITTM 309
           TSPY  +Q+W N+ DAD V F K  T L + EI+ + K      +E  A+K++A E+ T+
Sbjct: 245 TSPYEMYQFWMNVMDADAVRFLKIFTFLSLDEIEDIRKQFEAAPHERLAQKVLAREVVTL 304

Query: 310 VHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIVKA 359
           VHG E  ++A     + F  +I +          + +P   +  DE      ++ L+V +
Sbjct: 305 VHGEEAYKEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVQADE---NHNIVELLVSS 361

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN--IKLSFGKKNHIIC 414
           G   S  +AR  +++ AI +N   I +  L   L D D   N    +  GKK + + 
Sbjct: 362 GVVNSKRQAREDVQNGAIYVNGDRIQD--LDYVLSDTDKLENELTVIRRGKKKYFVL 416


>gi|307707771|ref|ZP_07644250.1| tyrosyl-tRNA synthetase [Streptococcus mitis NCTC 12261]
 gi|307616269|gb|EFN95463.1| tyrosyl-tRNA synthetase [Streptococcus mitis NCTC 12261]
          Length = 418

 Score =  284 bits (727), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 156/417 (37%), Positives = 231/417 (55%), Gaps = 21/417 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L ERG I Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  GHKP 
Sbjct: 7   LKERGLIFQTTDEEALRKALEEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAGHKPY 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+D  R +     +   ++ I+G  S F+ +  G+  A+M+NN  W
Sbjct: 67  ALVGGATGLIGDPSFKDAERSLQTKDTVDGWVKSIQGQLSRFLDFENGENKAVMVNNYDW 126

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
             SI +ID LR+IG +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF  L +++
Sbjct: 127 FGSISFIDFLRDIGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFFVLNQDH 184

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
           +  LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WLN E 
Sbjct: 185 NVTLQIGGSDQWGNMTAGTELLRRKADKTGHVITVPLITDATGKKFGKSEGNAVWLNPEK 244

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATEITTM 309
           TSPY  +Q+W N+ DAD V F K  T L + EI+ + K      +E  A+K++A E+ T+
Sbjct: 245 TSPYEMYQFWMNVMDADAVRFLKIFTFLSLDEIEDIRKQFEAAPHERLAQKVLAREVVTL 304

Query: 310 VHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIVKA 359
           VHG E  ++A     + F  +I +          + +P   +  DE      ++ L+V +
Sbjct: 305 VHGEEAYKEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVQADE---NHNIVELLVSS 361

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN--IKLSFGKKNHIIC 414
           G   S  +AR  +++ AI +N   I +  L   L D D   N    +  GKK + + 
Sbjct: 362 GVVNSKRQAREDVQNGAIYVNGDRIQD--LDYVLSDADKLENELTVIRRGKKKYFVL 416


>gi|331265554|ref|YP_004325184.1| tyrosyl-tRNA synthetase [Streptococcus oralis Uo5]
 gi|326682226|emb|CBY99843.1| tyrosyl-tRNA synthetase [Streptococcus oralis Uo5]
          Length = 418

 Score =  284 bits (727), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 156/417 (37%), Positives = 231/417 (55%), Gaps = 21/417 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L ERG I Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  GHKP 
Sbjct: 7   LKERGLIFQTTDEEALRKALEEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAGHKPY 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+D  R +     ++  ++ I+G  S F+ +  G+  A+M+NN  W
Sbjct: 67  ALVGGATGLIGDPSFKDAERSLQTKDTVEGWVKSIQGQLSRFLDFENGENKAVMVNNYDW 126

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
             SI +ID LR+IG +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF  L + +
Sbjct: 127 FGSISFIDFLRDIGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFYVLNQEH 184

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
           +  LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WLN E 
Sbjct: 185 NVTLQIGGSDQWGNMTAGTELLRRKADKTGHVITVPLITDATGKKFGKSEGNAVWLNPEK 244

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATEITTM 309
           TSPY  +Q+W N+ DAD V F K  T L + EI+ + K      +E  A+K++A E+ T+
Sbjct: 245 TSPYEMYQFWMNVMDADAVRFLKIFTFLSLDEIEDIRKQFEAAPHERLAQKVLAREVVTL 304

Query: 310 VHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIVKA 359
           VHG E  ++A     + F  +I +          + +P   +  DE      ++ L+V +
Sbjct: 305 VHGEEAYKEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVQADE---NHNIVELLVSS 361

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN--IKLSFGKKNHIIC 414
           G   S  +AR  +++ AI +N   I +  L   L D D   N    +  GKK + + 
Sbjct: 362 GVVNSKRQAREDVQNGAIYVNGDRIQD--LDYVLSDADKLENELTVIRRGKKKYFVL 416


>gi|146311467|ref|YP_001176541.1| tyrosyl-tRNA synthetase [Enterobacter sp. 638]
 gi|189083653|sp|A4W9W0|SYY_ENT38 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|145318343|gb|ABP60490.1| tyrosyl-tRNA synthetase [Enterobacter sp. 638]
          Length = 424

 Score =  284 bits (727), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 157/422 (37%), Positives = 236/422 (55%), Gaps = 13/422 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 4   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQE 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKPI+L+GG T +IGDPSF+   R++     +QE ++KI+   + F+ +  G+  A+ 
Sbjct: 64  MGHKPIALVGGATGLIGDPSFKAAERKLNTEDTVQEWVDKIRKQVAPFLDFDCGENSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDF 184
            NN  W  ++  +  LR+IG  FSVN+M++ E+V+ RL R +Q +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDQGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L + +   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 184 ACLNELHGVALQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+ +    K  GK    A+ +
Sbjct: 244 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMDIEEINALEEEDKNSGK-APRAQYV 302

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTL 355
           +A  +T +VH  +    A       F+ ++        + +    +   E+ +G  L+  
Sbjct: 303 LADLVTRLVHCEDGLAAAKRITASLFNGTLSDLSEADFEQLAQDGVPMVEMEKGADLMQA 362

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +V +    S  +AR+ + SNAI IN    ++ +      D        L  GKKN+  C 
Sbjct: 363 LVDSELQPSRGQARKTIASNAITINGEKQADPEYTFVDGDRLYGRYTLLRRGKKNY--CL 420

Query: 416 LC 417
           +C
Sbjct: 421 IC 422


>gi|226939536|ref|YP_002794609.1| Syy [Laribacter hongkongensis HLHK9]
 gi|254783613|sp|C1DCW5|SYY_LARHH RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|226714462|gb|ACO73600.1| Syy [Laribacter hongkongensis HLHK9]
          Length = 425

 Score =  284 bits (727), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 164/408 (40%), Positives = 236/408 (57%), Gaps = 21/408 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I Q ++   L  L     VT Y G+D TA SLH GHL  L++L   Q+ GH+PI
Sbjct: 10  LEARGLIAQQTDSGALQKLLESESVTLYCGFDPTADSLHLGHLVPLLMLRRFQEAGHRPI 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+   R++     I   ++KI+   S F+ +  G   A+M NN  W
Sbjct: 70  ALVGGATGMIGDPSFKAAERKLNTPDVIAGWVDKIRRQLSPFLSF-EGDNAAVMANNYDW 128

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDFVELAKN 190
              +  ++ LR+IG  FSVN M+  ESV+ R+ RE Q +SF EF+Y +LQ  DF EL   
Sbjct: 129 FGQMNVLEFLRDIGKHFSVNAMIKKESVQQRISREDQGISFTEFSYSLLQGNDFAELNCR 188

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKE 250
           + C+LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GK+   A+WL+ +
Sbjct: 189 FGCKLQIGGSDQWGNITAGIDLTRRLNQQQVFGLTVPLITNSDGTKFGKSEGNAVWLDPQ 248

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKKIIATEITT 308
             SPY F+Q+W  + DADV  F +  T L + +ID +  A        +A++I+A E T 
Sbjct: 249 KCSPYKFYQFWLGVADADVYRFLRYFTFLSIEQIDAIEAADKTSGTRPQAQRILAEEATR 308

Query: 309 MVHGREEAEKAATAAMECF---DMS-IHSQHMPTISISK----DEVSRGMGLLTLIVKAG 360
           +VHG +EA KAA    E     D+S + ++ +  +++      D   +G GL+  +  +G
Sbjct: 309 LVHG-DEALKAAQRITESLFSNDLSALTAEDLAQLALDGLPVLDMAGQGDGLIDALAASG 367

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGK 408
            A S +EAR  ++S A+ IN   I  E L     D+  TGN +L FG+
Sbjct: 368 LAKSKSEARTFIQSGAVSING--IKAEGL-----DYCLTGNDRL-FGR 407


>gi|90577965|ref|ZP_01233776.1| tyrosyl-tRNA synthetase [Vibrio angustum S14]
 gi|90441051|gb|EAS66231.1| tyrosyl-tRNA synthetase [Vibrio angustum S14]
          Length = 430

 Score =  284 bits (727), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 149/383 (38%), Positives = 219/383 (57%), Gaps = 9/383 (2%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG I QI++   L    ++G +T Y G+D TA SLH GHL  L+ L   Q+ GH P+
Sbjct: 16  LKDRGLIAQITDEEALSERLAKGPITLYCGFDPTADSLHLGHLVPLLCLKRFQEAGHNPV 75

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+   R +     +   + KI+   S F+ +      A M+NN  W
Sbjct: 76  ALVGGATGMIGDPSFKATERSLNTLDTVAGWVAKIQRQVSPFLDFDNATNPARMVNNHDW 135

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYDFVELAKN 190
             ++  +  LR+IG  FSVN+M+S ESV+ R+ R++  +SF EF Y +LQ+YDF  + K 
Sbjct: 136 FGNMDVLTFLRDIGKHFSVNQMISKESVKQRINRDEVGISFTEFAYSLLQSYDFASMNKE 195

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKE 250
               LQ+GGSDQWGNI  GIDL  R+   ++F +T PL+T + GTK GKT  GA+WL+  
Sbjct: 196 MGMELQIGGSDQWGNITAGIDLTRRMNQQQVFGMTVPLITKSDGTKFGKTEGGAVWLDPS 255

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLP--MSEIDRMAKLQGKEINEAKKIIATEITT 308
            TSPY F+Q+W N  DADV  F +  T L     +    A     +  EA++I+A + T 
Sbjct: 256 KTSPYKFYQFWMNTADADVYRFLRFFTFLSEEEIQQIEEADRNSGKAPEAQRILAEQTTR 315

Query: 309 MVHGREEAEKAATAAMECFDMSI-HSQHMPTISISKD-----EVSRGMGLLTLIVKAGFA 362
           +VHG+E+ E A       F+  + H        +++D     E   G  L  ++VK+G A
Sbjct: 316 LVHGQEQLEAAQNITRCLFENDLAHLSESDFAQLAQDGMPSAEAENGDDLQQVLVKSGLA 375

Query: 363 TSTNEARRHLKSNAIKINNSIIS 385
           +S  +A+ H+ SNAI +N   +S
Sbjct: 376 SSRGQAKTHISSNAIMVNGEKVS 398


>gi|297180971|gb|ADI17174.1| tyrosyl-tRNA synthetase [uncultured gamma proteobacterium
           HF0070_08D07]
          Length = 425

 Score =  284 bits (727), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 163/420 (38%), Positives = 250/420 (59%), Gaps = 17/420 (4%)

Query: 9   LSILSERGFIHQISNPREL-DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           L  LSERG + Q+S+   L + L  + VV  Y G+D TA SLH G L  L+ L   Q+ G
Sbjct: 9   LDELSERGLVAQVSDETGLREHLKKRRVV--YCGFDPTADSLHVGSLVPLIALNRFQRAG 66

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKPI L+GG T +IGDPSFR + R ++ S  +++ +  ++     F+ + TG+  AL++N
Sbjct: 67  HKPILLLGGATGLIGDPSFRSDERLLIDSDVVEKRVVSLRKQVEPFLSF-TGENSALIVN 125

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDFVE 186
           N  W   +  ID LR+IG +FS+N+M+  ++V+ RL  E Q +SF EF YMILQ+ DF+E
Sbjct: 126 NLDWSNKVLLIDFLRDIGKYFSINKMIQRDAVKPRLDAEGQGISFTEFTYMILQSMDFLE 185

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           LA + +C +Q+GGSDQWGN++ GIDL  R  + + +ALT PL+T A GTK GK+ +GA+W
Sbjct: 186 LAVSNECTIQIGGSDQWGNMVSGIDLIRRKLSLESYALTLPLITKADGTKFGKSEAGAVW 245

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE---AKKIIA 303
           L +  TSPY+F+Q+W N  DADV  F K  T +P  EI    + + KE  E   A++++A
Sbjct: 246 LERSKTSPYSFYQFWLNTSDADVEKFLKFFTFIPSEEIVETIQ-RTKEKPEDRIAQRVLA 304

Query: 304 TEITTMVHGREE--AEKAATAAM--ECFDMSIHS--QHMPTISISKDEVSRGMGLLTLIV 357
             +T  VHG ++  A +  ++A+  E FD       + +    +       G GLL+ +V
Sbjct: 305 DHMTQFVHGEKDRLASRRISSALFSENFDGLEQGDLEQLLQDGLPSRRCKSGEGLLSTMV 364

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            +  A S  EAR+ +    I +N S+I++  + +  +       + L  GKK++++  LC
Sbjct: 365 SSNLAKSNGEARKLIHGRGISVNGSVITDPSISLDFEGALYGQYLLLKKGKKSYVL--LC 422


>gi|149023797|ref|ZP_01836258.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae SP23-BS72]
 gi|168491625|ref|ZP_02715768.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae CDC0288-04]
 gi|168577131|ref|ZP_02722951.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae MLV-016]
 gi|169834443|ref|YP_001695461.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae Hungary19A-6]
 gi|225861916|ref|YP_002743425.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae Taiwan19F-14]
 gi|298229999|ref|ZP_06963680.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae str. Canada
           MDR_19F]
 gi|298254073|ref|ZP_06977659.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae str. Canada
           MDR_19A]
 gi|298501598|ref|YP_003723538.1| tyrosine--tRNA ligase [Streptococcus pneumoniae TCH8431/19A]
 gi|307128359|ref|YP_003880390.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae 670-6B]
 gi|254783643|sp|B1I9G6|SYY_STRPI RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|254783649|sp|C1CU03|SYY_STRZT RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|147929593|gb|EDK80586.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae SP23-BS72]
 gi|168996945|gb|ACA37557.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae Hungary19A-6]
 gi|183574103|gb|EDT94631.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae CDC0288-04]
 gi|183577264|gb|EDT97792.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae MLV-016]
 gi|225726447|gb|ACO22298.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae Taiwan19F-14]
 gi|298237193|gb|ADI68324.1| tyrosine--tRNA ligase [Streptococcus pneumoniae TCH8431/19A]
 gi|306485421|gb|ADM92290.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae 670-6B]
 gi|332198522|gb|EGJ12605.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae GA41317]
          Length = 418

 Score =  284 bits (727), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 156/417 (37%), Positives = 232/417 (55%), Gaps = 21/417 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L ERG I Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  GHKP 
Sbjct: 7   LKERGLIFQTTDEEALRKALEEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAGHKPY 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+D  R +     +   ++ I+G  S F+ +  G+  A+M+NN  W
Sbjct: 67  ALVGGATGLIGDPSFKDAERSLQTKDTVDGWVKSIQGQLSRFLDFENGENKAVMVNNYDW 126

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
             SI +ID LR+IG +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF  L +++
Sbjct: 127 FGSISFIDFLRDIGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFFVLNQDH 184

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
           +  LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WLN E 
Sbjct: 185 NVTLQIGGSDQWGNMTAGTELLRRKADKTGHVITVPLITDATGKKFGKSEGNAVWLNPEK 244

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATEITTM 309
           TSPY  +Q+W N+ DAD V F K  T L + EI+ + K      +E  A+K++A E+ T+
Sbjct: 245 TSPYEMYQFWMNVMDADAVRFLKIFTFLSLDEIEDIRKQFEAAPHERLAQKVLAREVVTL 304

Query: 310 VHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIVKA 359
           VHG E  ++A     + F  +I +          + +P   +  DE +    ++ L+V +
Sbjct: 305 VHGEEAYKEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVQADEHNN---IVELLVSS 361

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN--IKLSFGKKNHIIC 414
           G   S  +AR  +++ AI +N   I +  L   L D D   N    +  GKK + + 
Sbjct: 362 GIVNSKRQAREDVQNGAIYVNGDRIQD--LDYVLSDADKLENELTVIRRGKKKYFVL 416


>gi|90407450|ref|ZP_01215634.1| tyrosyl-tRNA synthetase [Psychromonas sp. CNPT3]
 gi|90311481|gb|EAS39582.1| tyrosyl-tRNA synthetase [Psychromonas sp. CNPT3]
          Length = 423

 Score =  284 bits (726), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 160/389 (41%), Positives = 222/389 (57%), Gaps = 22/389 (5%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L  RG I Q +   EL    S G  T Y G+D TA SLH G L  L+ L   Q  G
Sbjct: 4   LLEDLKARGLIAQTTADEELHEHLSSGCRTLYCGFDPTADSLHIGSLVPLLTLKRFQDAG 63

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKP++L+GG T +IGDPSF+   R++     ++  + KIK   S+FIK+G  K  A ++N
Sbjct: 64  HKPLALVGGATGLIGDPSFKAAERKLNTDDVVENWVAKIKAQVSAFIKFGDAKNAAEVVN 123

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQS-LSFLEFNYMILQAYDFVE 186
           N  W+  +  I  LR++G  FSVN M+  ESV+ R+ RE + +SF EF+YM+LQ+YDF  
Sbjct: 124 NLDWISKMDAISFLRDVGKHFSVNAMIQKESVKQRIDREGAGISFTEFSYMLLQSYDFAA 183

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L ++ DC LQ+GGSDQWGNI  GIDL  R+   K++ LT PL+T A GTK GKT SG IW
Sbjct: 184 LNESKDCTLQIGGSDQWGNITGGIDLTRRMNKKKVYGLTLPLVTKADGTKFGKTESGTIW 243

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM----AKLQGKEINEAKKII 302
           L+   TSPY F+Q+W    DADV  F +  T L ++EID +       QG+   +A  I+
Sbjct: 244 LDATKTSPYAFYQFWITTLDADVYKFLRFFTFLSIAEIDAIEAQDKAAQGRPQGQA--IL 301

Query: 303 ATEITTMVHGR---EEAEKAATA-------AMECFDMSIHSQH-MPTISISKDEVSRGMG 351
           A E+T +VHG      AE+   A       A+   D+   +Q  +P+  +S  E S    
Sbjct: 302 AKEVTKIVHGETGLASAERITEALFSGDLSALSLSDLGQLAQDGLPSTQVSGTEKS---- 357

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKIN 380
           L+ L+  +  A S   AR  + + A+ +N
Sbjct: 358 LVELLTSSELAKSNKMAREFISNGAVSVN 386


>gi|213963510|ref|ZP_03391763.1| tyrosyl-tRNA synthetase [Capnocytophaga sputigena Capno]
 gi|213953790|gb|EEB65119.1| tyrosyl-tRNA synthetase [Capnocytophaga sputigena Capno]
          Length = 431

 Score =  284 bits (726), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 160/429 (37%), Positives = 235/429 (54%), Gaps = 24/429 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG I  I    E  ++  +G+  AY+G D TA SLH GHL  +M+L   Q  
Sbjct: 3   NFIEELRWRGMIQDIMPETEQHLM--EGLRAAYVGIDPTADSLHIGHLVGVMMLRHFQNC 60

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY-GTGKTDALM 125
           GHKP +L+GG T +IGDPS +   R ++  + +  NI  IK   + F+ +  T    A +
Sbjct: 61  GHKPYALVGGATGMIGDPSGKSVERNLLTEEVLAHNIAGIKKQLAKFLDFESTAPNRAEL 120

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQS---LSFLEFNYMILQAY 182
           +NN  W+    ++  +R+IG   +VN M++ +SV+ R    ++   +SF EF+Y +LQ Y
Sbjct: 121 VNNYDWMKEFSFLSFIRDIGKHITVNYMMAKDSVKKRFDPNENTDGMSFTEFSYQLLQGY 180

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DF+ L +  +  LQMGGSDQWGNI  G +L  R+   K +ALT PL+T A GTK GK+  
Sbjct: 181 DFLHLYQEKNLTLQMGGSDQWGNITTGTELIRRIAGGKAYALTCPLITKADGTKFGKSEG 240

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKK 300
           G +WL+ E TSPY F+QYW NI DAD   + K  T L   EID +     +   +   + 
Sbjct: 241 GNVWLDPEKTSPYKFYQYWINISDADAERYIKIFTMLSKEEIDALIAQHAEAPHLRLLQN 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDEV 346
            +A E+T +VHGREE EKA  A+   F  S  +                +P   +S  ++
Sbjct: 301 KLAEELTVLVHGREELEKAKKASQILFGNSTSADLRTLDEKTFLEVFDGVPQAEVSAADI 360

Query: 347 SRGMGLLTLI-VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLS 405
           + G+ ++ ++  K GF +S +EARR LK N+I +N   +  E  QI  +D      I L 
Sbjct: 361 AGGLDMIAILSAKTGFISSNSEARRALKENSISVNKEKVG-EDYQIAEKDLVDGKFILLQ 419

Query: 406 FGKKNHIIC 414
            GKKN+ I 
Sbjct: 420 RGKKNYFIV 428


>gi|304388370|ref|ZP_07370481.1| tyrosine--tRNA ligase [Neisseria meningitidis ATCC 13091]
 gi|304337636|gb|EFM03794.1| tyrosine--tRNA ligase [Neisseria meningitidis ATCC 13091]
          Length = 431

 Score =  284 bits (726), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 154/380 (40%), Positives = 220/380 (57%), Gaps = 14/380 (3%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I Q ++   LD L ++  +  Y G+D TA SLH GHL  ++ L   Q+ GH PI
Sbjct: 7   LQSRGLIAQTTDIEALDALLNEQKIALYCGFDPTADSLHIGHLLPVLALRRFQQAGHTPI 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+   R +  ++ +   +E I+   + F+ +  G   A+M NN  W
Sbjct: 67  ALVGGATGMIGDPSFKAAERSLNSAETVAGWVESIRNQLTPFLSFEGGNA-AIMANNADW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQS-LSFLEFNYMILQAYDFVELAKN 190
              +  +D LR+IG  FSVN ML+ ESV+ R+ R+ + +SF EF Y +LQ YDF EL K 
Sbjct: 126 FGKMNCLDFLRDIGKHFSVNAMLNKESVKQRIDRDGAGISFTEFAYSLLQGYDFAELNKR 185

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKE 250
           +   L++GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  GA+WLN +
Sbjct: 186 HGAVLEIGGSDQWGNITAGIDLTRRLHQKQVFGLTLPLVTKSDGTKFGKTEGGAVWLNAK 245

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKIIATEIT 307
            TSPY F+Q+W  + DADV  F K  T L + EID +    K  G +  EA++I+A E+T
Sbjct: 246 KTSPYQFYQFWLKVADADVYKFLKYFTFLSIEEIDAIEAKDKASGTK-PEAQRILAEEMT 304

Query: 308 TMVHGREEAEKAATAAMECFDMSIHS-------QHMPTISISKDEVSRGMGLLTLIVKAG 360
            ++HG E A +AA    E       S       + +    +   E+S G+  +  +VK G
Sbjct: 305 RLIHG-EAALQAAQRISESLFAEDQSSLTESDFEQLALDGLPAFEISDGINAVEALVKTG 363

Query: 361 FATSTNEARRHLKSNAIKIN 380
            A S  EAR  + + A+ +N
Sbjct: 364 LAASNKEARGFVNAKAVLLN 383


>gi|319945777|ref|ZP_08020028.1| tyrosine--tRNA ligase [Streptococcus australis ATCC 700641]
 gi|319748137|gb|EFW00380.1| tyrosine--tRNA ligase [Streptococcus australis ATCC 700641]
          Length = 418

 Score =  284 bits (726), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 157/417 (37%), Positives = 230/417 (55%), Gaps = 21/417 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L ERG I Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  GHKP 
Sbjct: 7   LKERGLIFQTTDEDALRKALEEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAGHKPY 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+D  R +   + +   +  I+G  S F+ +  G+  A+M+NN  W
Sbjct: 67  ALVGGATGLIGDPSFKDAERSLQTKETVDGWVASIQGQLSRFLDFENGENKAVMVNNYDW 126

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
             SI +ID LR+IG +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF  L + +
Sbjct: 127 FGSISFIDFLRDIGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFFVLNQEH 184

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
           +  LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WLN   
Sbjct: 185 NVTLQIGGSDQWGNMTAGTELMRRKADKTGHVITVPLITDATGKKFGKSEGNAVWLNASK 244

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATEITTM 309
           TSPY  +Q+W N+ DAD V F K  T L + EI+ + K      +E  A+KI+A E+ T+
Sbjct: 245 TSPYEMYQFWMNVMDADAVRFLKIFTFLSLDEIEEIRKQFEAAPHERLAQKILAREVVTL 304

Query: 310 VHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIVKA 359
           VHG E  ++A     + F  +I +          + +P   +  DE    + ++ L+V +
Sbjct: 305 VHGEEAYKEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVQADE---NLNIVELLVTS 361

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN--IKLSFGKKNHIIC 414
           G   S  +AR  +++ AI IN   I +  L   L D D   N    +  GKK + + 
Sbjct: 362 GVVNSKRQAREDVQNGAIYINGDRIQD--LDYVLSDSDKLENELTVIRRGKKKYFVL 416


>gi|182685035|ref|YP_001836782.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae CGSP14]
 gi|303256064|ref|ZP_07342086.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae BS455]
 gi|303259601|ref|ZP_07345577.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae SP-BS293]
 gi|303262046|ref|ZP_07347991.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS292]
 gi|303264502|ref|ZP_07350421.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae BS397]
 gi|303266777|ref|ZP_07352658.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae BS457]
 gi|303269003|ref|ZP_07354786.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae BS458]
 gi|259517019|sp|B2IN18|SYY_STRPS RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|182630369|gb|ACB91317.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae CGSP14]
 gi|301802770|emb|CBW35544.1| putative tyrosyl-tRNA synthetase [Streptococcus pneumoniae INV200]
 gi|302596980|gb|EFL64104.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae BS455]
 gi|302636686|gb|EFL67176.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS292]
 gi|302639153|gb|EFL69612.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae SP-BS293]
 gi|302641470|gb|EFL71834.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae BS458]
 gi|302643685|gb|EFL73951.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae BS457]
 gi|302645872|gb|EFL76100.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae BS397]
          Length = 418

 Score =  284 bits (726), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 155/417 (37%), Positives = 232/417 (55%), Gaps = 21/417 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L ERG I Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  GHKP 
Sbjct: 7   LKERGLIFQTTDEEALRKALEEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAGHKPY 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+D  R +     +   ++ I+G  S F+ +  G+  A+M+NN  W
Sbjct: 67  ALVGGATGLIGDPSFKDAERSLQTKDTVDGWVKSIQGQLSRFLDFENGENKAVMVNNYDW 126

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
             SI +ID LR+IG +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF  L +++
Sbjct: 127 FGSISFIDFLRDIGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFFVLNQDH 184

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
           +  LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WLN E 
Sbjct: 185 NVTLQIGGSDQWGNMTAGTELLRRKADKTGHVITVPLITDATGKKFGKSEGNAVWLNPEK 244

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATEITTM 309
           TSPY  +Q+W N+ DAD + F K  T L + EI+ + K      +E  A+K++A E+ T+
Sbjct: 245 TSPYEMYQFWMNVMDADAIRFLKIFTFLSLDEIEDIRKQFEAAPHERLAQKVLAREVVTL 304

Query: 310 VHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIVKA 359
           VHG E  ++A     + F  +I +          + +P   +  DE +    ++ L+V +
Sbjct: 305 VHGEEAYKEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVQADENNN---IVELLVSS 361

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN--IKLSFGKKNHIIC 414
           G   S  +AR  +++ AI +N   I +  L   L D D   N    +  GKK + + 
Sbjct: 362 GIVNSKRQAREDVQNGAIYVNGDRIQD--LDYVLSDADKLENELTVIRRGKKKYFVL 416


>gi|306826301|ref|ZP_07459635.1| tyrosine--tRNA ligase [Streptococcus sp. oral taxon 071 str.
           73H25AP]
 gi|304431577|gb|EFM34559.1| tyrosine--tRNA ligase [Streptococcus sp. oral taxon 071 str.
           73H25AP]
          Length = 418

 Score =  284 bits (726), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 155/417 (37%), Positives = 231/417 (55%), Gaps = 21/417 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L ERG I Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  GHKP 
Sbjct: 7   LKERGLIFQTTDEEALRKALEEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAGHKPY 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+D  R +     ++  ++ I+G  S F+ +  G+  A+M+NN  W
Sbjct: 67  ALVGGATGLIGDPSFKDAERSLQTKDTVEGWVKSIQGQLSRFLDFENGENKAVMVNNYDW 126

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
             SI +ID LR++G +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF  L + +
Sbjct: 127 FGSISFIDFLRDVGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFYVLNQEH 184

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
           +  LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WLN E 
Sbjct: 185 NVTLQIGGSDQWGNMTAGTELLRRKADKTGHVITVPLITDATGKKFGKSEGNAVWLNPEK 244

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATEITTM 309
           TSPY  +Q+W N+ DAD V F K  T L + EI+ + K      +E  A+K++A E+ T+
Sbjct: 245 TSPYEMYQFWMNVMDADAVRFLKIFTFLSLDEIEDIRKQFEAAPHERLAQKVLAREVVTL 304

Query: 310 VHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIVKA 359
           VHG E  ++A     + F  +I +          + +P   +  DE      ++ L+V +
Sbjct: 305 VHGEEAYKEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVKADE---NHNIVELLVSS 361

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN--IKLSFGKKNHIIC 414
           G   S  +AR  +++ AI +N   I +  L   L D D   N    +  GKK + + 
Sbjct: 362 GVVNSKRQAREDVQNGAIYVNGDRIQD--LDYVLSDADKLENELTVIRRGKKKYFVL 416


>gi|149196813|ref|ZP_01873866.1| tyrosyl-tRNA synthetase [Lentisphaera araneosa HTCC2155]
 gi|149139923|gb|EDM28323.1| tyrosyl-tRNA synthetase [Lentisphaera araneosa HTCC2155]
          Length = 424

 Score =  284 bits (726), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 160/411 (38%), Positives = 240/411 (58%), Gaps = 14/411 (3%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I Q S   EL    S   ++ Y G+D TA SLH GHL  L+ L   Q+ GH  +
Sbjct: 9   LKWRGLIFQESGQDELRSYLSDEKISVYCGFDPTADSLHIGHLVPLITLRRFQEYGHSVL 68

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L GG T +IGDPS + + R ++ S +I  N+E IK      I + +G + A ++NN  W
Sbjct: 69  PLAGGATGMIGDPSGKSQERNLLSSDDIAHNVESIKSQLKQIIDF-SGDS-ATLVNNFDW 126

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK-REQSLSFLEFNYMILQAYDFVELAKN 190
           +  I  I+ LR+IG  FSVN M++ +SV SRL+ +E  LS+ EF+YM+LQ YDF+ L + 
Sbjct: 127 ISKINIIEYLRDIGKNFSVNVMMNRDSVSSRLEGKEAGLSYTEFSYMVLQGYDFLHLNRE 186

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKE 250
           ++C LQ+GGSDQWGN+  G+DL  R    + F +T PL+  + GTK GKT  G++WL+ +
Sbjct: 187 HNCTLQIGGSDQWGNMTSGMDLIRRSNGKRSFCMTVPLIMKSDGTKFGKTAGGSVWLDPK 246

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKKIIATEITT 308
            T PY+F+QYW N+ DADV+ F K  T LP   ++ +  +  Q   + EA+K +A E+TT
Sbjct: 247 QTCPYDFYQYWFNVADADVIRFIKFFTFLPQDVVEALQASVEQEPHLREAQKKLAWEMTT 306

Query: 309 MVHGREEAEKAATAAMECFD---------MSIHSQHMPTISISKDEVSRGMGLLTLIVKA 359
           M+HG EEA+KA  AA   F          +++ + H  T + S   +    G+L+L+  +
Sbjct: 307 MIHGEEEAKKAIFAAAALFGREDIREVDAITMDALHNATEAPSFSSLDEVEGILSLLTAS 366

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
           G   S+ EAR+ ++ N I +NN  + + + +   +D      + L  GKK+
Sbjct: 367 GLCKSSGEARKMVQGNGISLNNEKVKDFRYKPVQEDLIHQTYLVLRKGKKD 417


>gi|300819606|ref|ZP_07099799.1| tyrosyl-tRNA synthetase [Escherichia coli MS 107-1]
 gi|300527854|gb|EFK48916.1| tyrosyl-tRNA synthetase [Escherichia coli MS 107-1]
          Length = 358

 Score =  283 bits (725), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 141/326 (43%), Positives = 204/326 (62%), Gaps = 6/326 (1%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 8   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 67

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +QE ++KI+   + F+ +  G+  A+ 
Sbjct: 68  AGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDCGENSAIA 127

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDF 184
            NN  W  ++  +  LR+IG  FSVN+M++ E+V+ RL RE Q +SF EF+Y +LQ YDF
Sbjct: 128 ANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNREDQGISFTEFSYNLLQGYDF 187

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K Y   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 188 ACLNKQYGVVLQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 247

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK---I 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+ + + + K   +A +   +
Sbjct: 248 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINALEE-EDKNSGKAPRGQYV 306

Query: 302 IATEITTMVHGREEAEKAATAAMECF 327
           +A ++T +VHG EE  +AA    EC 
Sbjct: 307 LAEQVTRLVHG-EEGLQAAKRITECL 331


>gi|307705759|ref|ZP_07642604.1| tyrosyl-tRNA synthetase [Streptococcus mitis SK597]
 gi|307620677|gb|EFN99768.1| tyrosyl-tRNA synthetase [Streptococcus mitis SK597]
          Length = 418

 Score =  283 bits (725), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 156/417 (37%), Positives = 231/417 (55%), Gaps = 21/417 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L ERG I Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  GHKP 
Sbjct: 7   LKERGLIFQTTDEEALRKALEEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAGHKPY 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+D  R +     +   ++ I+G  S F+ +  G+  A+M+NN  W
Sbjct: 67  ALVGGATGLIGDPSFKDAERSLQTKDTVNGWVKSIQGQLSRFLDFENGENKAVMVNNYDW 126

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
             SI +ID LR+IG +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF  L +++
Sbjct: 127 FGSISFIDFLRDIGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFFVLNQDH 184

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
           +  LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WLN E 
Sbjct: 185 NVTLQIGGSDQWGNMTAGTELLRRKADKTGHVITVPLITDATGKKFGKSEGNAVWLNPEK 244

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATEITTM 309
           TSPY  +Q+W N+ DAD V F K  T L + EI+ + K      +E  A+K++A E+ T+
Sbjct: 245 TSPYEMYQFWMNVMDADAVRFLKIFTFLSLDEIEDIRKQFEAAPHERLAQKVLAREVVTL 304

Query: 310 VHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIVKA 359
           VHG E  ++A     + F  +I +          + +P   +  DE      ++ L+V +
Sbjct: 305 VHGEEAYKEALNITEQLFAGNIKNLSVKELKQGLRGVPNHQVQADE---NHNIVELLVSS 361

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN--IKLSFGKKNHIIC 414
           G   S  +AR  +++ AI +N   I +  L   L D D   N    +  GKK + + 
Sbjct: 362 GVVNSKRQAREDVQNGAIYVNGDRIQD--LDYVLTDADKLENELTVIRRGKKKYFVL 416


>gi|149006933|ref|ZP_01830614.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae SP18-BS74]
 gi|149011956|ref|ZP_01833104.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae SP19-BS75]
 gi|147761534|gb|EDK68499.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae SP18-BS74]
 gi|147763911|gb|EDK70844.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae SP19-BS75]
 gi|332071173|gb|EGI81668.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae GA17545]
          Length = 418

 Score =  283 bits (725), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 155/417 (37%), Positives = 233/417 (55%), Gaps = 21/417 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG I Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  GHKP 
Sbjct: 7   LKDRGLIFQTTDEEALRKALEEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAGHKPY 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+D  R +     +   ++ I+G  S F+ +  G+  A+M+NN  W
Sbjct: 67  ALVGGATGLIGDPSFKDAERSLQTKDTVDGWVKSIQGQLSRFLDFENGENKAVMVNNYDW 126

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
             SI +ID LR+IG +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF  L +++
Sbjct: 127 FGSISFIDFLRDIGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFFVLNQDH 184

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
           +  LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WLN E 
Sbjct: 185 NVTLQIGGSDQWGNMTAGTELLRRKADKTGHVITVPLITDATGKKFGKSEGNAVWLNPEK 244

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATEITTM 309
           TSPY  +Q+W N+ DAD V F K  T L + EI+ + K      +E  A+K++A E+ T+
Sbjct: 245 TSPYEMYQFWMNVMDADAVRFLKIFTFLSLDEIEDIRKQFEAAPHERLAQKVLAREVVTL 304

Query: 310 VHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIVKA 359
           VHG E  ++A     + F  +I +          + +P   +  DE +    ++ L+V +
Sbjct: 305 VHGEEAYKEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVQADENNN---IVELLVSS 361

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN--IKLSFGKKNHIIC 414
           G   S  +AR  +++ AI +N   I  ++L   L D D   N    +  GKK + + 
Sbjct: 362 GIVNSKRQAREDVQNGAIYVNGDRI--QELDYVLSDADKLENELTVIRRGKKKYFVL 416


>gi|332292105|ref|YP_004430714.1| tyrosyl-tRNA synthetase [Krokinobacter diaphorus 4H-3-7-5]
 gi|332170191|gb|AEE19446.1| tyrosyl-tRNA synthetase [Krokinobacter diaphorus 4H-3-7-5]
          Length = 431

 Score =  283 bits (725), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 158/427 (37%), Positives = 238/427 (55%), Gaps = 23/427 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG IH +    E  ++  + + +AY+G+D TA SLH G+L  +MLL   Q++
Sbjct: 4   NFVEELQWRGMIHDVMPQTEEHLM--EAMRSAYVGFDPTADSLHIGNLVPIMLLAHYQRS 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG-KTDALM 125
           GH+P++L+GG T +IGDPS +   R ++  + ++ N E +K   S F+ + +G +  AL+
Sbjct: 62  GHRPVALVGGATGMIGDPSGKSSERNLLDEKTLRHNQECVKSQLSQFLDFTSGAENQALL 121

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQS--LSFLEFNYMILQAYD 183
           +NN  W+    ++D +R++G   +VN M++ +SV++RL  E +  +SF EF Y ++Q YD
Sbjct: 122 VNNYDWMKEFSFLDFIRDVGKHITVNYMMAKDSVKNRLTGEDADGMSFTEFTYQMVQGYD 181

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ L KN    LQMGGSDQWGNI  G +L  R+   K +ALT PL+T + G+K GK+  G
Sbjct: 182 FLHLYKNEGITLQMGGSDQWGNITTGTELVRRIGGGKGYALTCPLITKSDGSKFGKSEGG 241

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKKI 301
            +WLN + TSPY F+QYW N  D D   + K  T L   EI+ +  A  +       +K 
Sbjct: 242 NVWLNAKRTSPYKFYQYWLNTTDEDAEKYIKIFTFLDREEIEALVAAHKEAPHQRALQKR 301

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDEVS 347
           +A E+TT VH  E  EKA  A+   F  S                 + +P   I K E+ 
Sbjct: 302 LAEEVTTTVHDAEALEKAIAASNILFGKSTSDDLKSLDEATFLDVFEGVPQAEIEKSEIE 361

Query: 348 RGMGLL-TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+ ++  L  K GF  S  EARR LK N+I IN   +  E   I+  D  +   + L  
Sbjct: 362 AGLDIIAALAEKTGFLKSNGEARRALKENSISINKEKVG-EDYTIQTTDLINGTFVLLQR 420

Query: 407 GKKNHII 413
           GKKN+ +
Sbjct: 421 GKKNYFV 427


>gi|148992057|ref|ZP_01821831.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae SP9-BS68]
 gi|168489160|ref|ZP_02713359.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae SP195]
 gi|147929106|gb|EDK80117.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae SP9-BS68]
 gi|183572178|gb|EDT92706.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae SP195]
 gi|332071534|gb|EGI82027.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae GA17570]
          Length = 418

 Score =  283 bits (725), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 155/417 (37%), Positives = 232/417 (55%), Gaps = 21/417 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG I Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  GHKP 
Sbjct: 7   LKDRGLIFQTTDEEALRKALEEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAGHKPY 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+D  R +     +   ++ I+G  S F+ +  G+  A+M+NN  W
Sbjct: 67  ALVGGATGLIGDPSFKDAERSLQTKDTVDGWVKSIQGQLSRFLDFENGENKAVMVNNYDW 126

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
             SI +ID LR+IG +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF  L +++
Sbjct: 127 FGSISFIDFLRDIGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFFVLNQDH 184

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
           +  LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WLN E 
Sbjct: 185 NVTLQIGGSDQWGNMTAGTELLRRKADKTGHVITVPLITDATGKKFGKSEGNAVWLNPEK 244

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATEITTM 309
           TSPY  +Q+W N+ DAD V F K  T L + EI+ + K      +E  A+K++A E+ T+
Sbjct: 245 TSPYEMYQFWMNVMDADTVRFLKIFTFLSLDEIEDIRKQFEAAPHERLAQKVLAREVVTL 304

Query: 310 VHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIVKA 359
           VHG E  ++A     + F  +I +          + +P   +  DE +    ++ L+V +
Sbjct: 305 VHGEEAYKEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVQADENNN---IVELLVSS 361

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN--IKLSFGKKNHIIC 414
           G   S  +AR  +++ AI +N   I +  L   L D D   N    +  GKK + + 
Sbjct: 362 GIVNSKRQAREDVQNGAIYVNGDRIQD--LDYVLSDADKLENELTVIRRGKKKYFVL 416


>gi|322392516|ref|ZP_08065976.1| tyrosine--tRNA ligase [Streptococcus peroris ATCC 700780]
 gi|321144508|gb|EFX39909.1| tyrosine--tRNA ligase [Streptococcus peroris ATCC 700780]
          Length = 418

 Score =  283 bits (725), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 157/417 (37%), Positives = 230/417 (55%), Gaps = 21/417 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L ERG I Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  GHKP 
Sbjct: 7   LKERGLIFQTTDEEALRKSLEEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAGHKPY 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+D  R +     +   ++ I+G  S F+ +  G+  A+M+NN  W
Sbjct: 67  ALVGGATGLIGDPSFKDAERSLQTKDTVDGWVKSIQGQLSRFLDFENGENKAVMVNNYDW 126

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
             SI +ID LR+IG +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF  L + +
Sbjct: 127 FGSISFIDFLRDIGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFFVLNQEH 184

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
           +  LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WLN E 
Sbjct: 185 NVTLQIGGSDQWGNMTAGTELLRRKADKTGHVITVPLITDATGKKFGKSEGNAVWLNPEK 244

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATEITTM 309
           TSPY  +Q+W N+ DAD V F K  T L + EI+ + K      +E  A+K++A E+ T+
Sbjct: 245 TSPYEMYQFWMNVMDADAVRFLKIFTFLSLDEIEDIRKQFEAAPHERLAQKVLAREVVTL 304

Query: 310 VHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIVKA 359
           VHG E  ++A     + F  +I +          + +P   +  DE      ++ L+V +
Sbjct: 305 VHGEEAYKEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVQADE---NHNIVELLVSS 361

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN--IKLSFGKKNHIIC 414
           G   S  +AR  +++ AI IN   I +  L   L D D   N    +  GKK + + 
Sbjct: 362 GVVNSKRQAREDIQNGAIYINGDRIQD--LDYILSDADKLENELTVIRRGKKKYFVL 416


>gi|226330314|ref|ZP_03805832.1| hypothetical protein PROPEN_04228 [Proteus penneri ATCC 35198]
 gi|225201109|gb|EEG83463.1| hypothetical protein PROPEN_04228 [Proteus penneri ATCC 35198]
          Length = 428

 Score =  283 bits (724), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 158/422 (37%), Positives = 232/422 (54%), Gaps = 19/422 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + ++ L ERG I Q+++   L     QG +  Y G+D TA SLH GHL  L+ L   Q  
Sbjct: 9   NLITQLQERGLIAQVTDEAALVERLEQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQLA 68

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP++L+GG T +IGDPSF+   R++     + E +EKI+   S F+ + +G+  A + 
Sbjct: 69  GHKPVALVGGATGLIGDPSFKATERKLNTQDTVHEWVEKIRKQVSPFLDFDSGENSAELA 128

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYDFV 185
           NN  W   +  +  LR+IG  FSVN+M++ E+V+ RL R+   +SF EF Y +LQAYDF 
Sbjct: 129 NNYDWFGQMDVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDVGISFTEFAYNLLQAYDFA 188

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L  +    LQ+GGSDQWGNI  GIDL  R    ++F +T PL+T + GTK GKT  GA+
Sbjct: 189 SLNTHLGVELQIGGSDQWGNITSGIDLTRRFNQKQVFGMTVPLITKSDGTKFGKTEGGAV 248

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIA 303
           WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+ + +      +   A++++A
Sbjct: 249 WLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINALEEEDKNSGQAPRAQRVLA 308

Query: 304 TEITTMVHGR----------EEAEKAATAAMECFDMSIHSQH-MPTISISKDEVSRGMGL 352
             +T +VHG           E     A A +   D+   +Q  MPTI     E+ +G  L
Sbjct: 309 ELVTGLVHGEDGLIAAKRITESLFSGAIADLTQADLEQLAQDGMPTI-----ELEKGSDL 363

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
              +V A    S  +AR  + SNA+ IN     N +   + +DF       L  GKK++ 
Sbjct: 364 QQALVNAELVPSRGQARTMIGSNAVSINGEKQDNPEYIFEEKDFLFGHYSILRRGKKHYC 423

Query: 413 IC 414
           + 
Sbjct: 424 LV 425


>gi|308094994|ref|ZP_05893140.2| tyrosine--tRNA ligase [Vibrio parahaemolyticus AN-5034]
 gi|308092687|gb|EFO42382.1| tyrosine--tRNA ligase [Vibrio parahaemolyticus AN-5034]
          Length = 435

 Score =  283 bits (724), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 153/408 (37%), Positives = 229/408 (56%), Gaps = 26/408 (6%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +  L  L +RG I Q S+  E+  L SQ   T Y G+D TA SLH GHL  L++L   Q 
Sbjct: 19  TPLLQDLQDRGLIAQASDLEEIQTLLSQ-PQTVYCGFDPTAGSLHIGHLVPLIMLKRFQD 77

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+ ++L+GG T +IGDPSF+   R +  ++ +   +  +       + +   K   +M
Sbjct: 78  AGHQAVALIGGATGMIGDPSFKATERSLNSAEIVSGWVNDLSNQIQQLMNHQLSKP-MIM 136

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDF 184
           +NN  W+ +I  ID  R++G  FS+N M++ ESV+ RL+R +Q +SF EF+Y +LQ+YDF
Sbjct: 137 VNNADWMRAINVIDFFRDVGKHFSINTMINRESVKQRLQRPDQGISFTEFSYALLQSYDF 196

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
            EL + Y CRLQ+GG+DQWGNI+ GIDL  R    ++F LT PL+T + GTK GKT  GA
Sbjct: 197 AELNRQYGCRLQIGGNDQWGNIVSGIDLTRRQNGEQVFGLTLPLITKSDGTKFGKTEGGA 256

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL----QGKEINEAKK 300
           +WL+   TSPY F+Q+W   +DADV  F +  T L   EI  +       QGK   +A++
Sbjct: 257 VWLDPSKTSPYAFYQFWLGAEDADVYHFLRYYTFLSCEEIASIEAQDQASQGKP--QAQR 314

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHS-----------QHMPTISISKDEVSRG 349
           I+A E+T  VHG E    A       F  ++               +P+I  ++ +    
Sbjct: 315 ILAEEMTRFVHGEEGLASAERITQALFSGNVQQLSLGELKQLELDGLPSIESAQQD---- 370

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
             L+ L++++G A+S   AR H+ +NAI +N   +S +   +    FD
Sbjct: 371 --LVELLIESGLASSKRVAREHISNNAISVNGEKVSADNPSLSFPLFD 416


>gi|28900223|ref|NP_799878.1| tyrosyl-tRNA synthetase [Vibrio parahaemolyticus RIMD 2210633]
 gi|260361652|ref|ZP_05774679.1| tyrosine--tRNA ligase [Vibrio parahaemolyticus K5030]
 gi|260896505|ref|ZP_05905001.1| tyrosine--tRNA ligase [Vibrio parahaemolyticus Peru-466]
 gi|260899481|ref|ZP_05907876.1| tyrosine--tRNA ligase [Vibrio parahaemolyticus AQ4037]
 gi|81726271|sp|Q87J85|SYY1_VIBPA RecName: Full=Tyrosyl-tRNA synthetase 1; AltName:
           Full=Tyrosine--tRNA ligase 1; Short=TyrRS 1
 gi|28808534|dbj|BAC61711.1| tyrosyl-tRNA synthetase [Vibrio parahaemolyticus RIMD 2210633]
 gi|308089276|gb|EFO38971.1| tyrosine--tRNA ligase [Vibrio parahaemolyticus Peru-466]
 gi|308109218|gb|EFO46758.1| tyrosine--tRNA ligase [Vibrio parahaemolyticus AQ4037]
 gi|308112741|gb|EFO50281.1| tyrosine--tRNA ligase [Vibrio parahaemolyticus K5030]
          Length = 419

 Score =  283 bits (724), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 153/408 (37%), Positives = 229/408 (56%), Gaps = 26/408 (6%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +  L  L +RG I Q S+  E+  L SQ   T Y G+D TA SLH GHL  L++L   Q 
Sbjct: 3   TPLLQDLQDRGLIAQASDLEEIQTLLSQ-PQTVYCGFDPTAGSLHIGHLVPLIMLKRFQD 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+ ++L+GG T +IGDPSF+   R +  ++ +   +  +       + +   K   +M
Sbjct: 62  AGHQAVALIGGATGMIGDPSFKATERSLNSAEIVSGWVNDLSNQIQQLMNHQLSKP-MIM 120

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDF 184
           +NN  W+ +I  ID  R++G  FS+N M++ ESV+ RL+R +Q +SF EF+Y +LQ+YDF
Sbjct: 121 VNNADWMRAINVIDFFRDVGKHFSINTMINRESVKQRLQRPDQGISFTEFSYALLQSYDF 180

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
            EL + Y CRLQ+GG+DQWGNI+ GIDL  R    ++F LT PL+T + GTK GKT  GA
Sbjct: 181 AELNRQYGCRLQIGGNDQWGNIVSGIDLTRRQNGEQVFGLTLPLITKSDGTKFGKTEGGA 240

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL----QGKEINEAKK 300
           +WL+   TSPY F+Q+W   +DADV  F +  T L   EI  +       QGK   +A++
Sbjct: 241 VWLDPSKTSPYAFYQFWLGAEDADVYHFLRYYTFLSCEEIASIEAQDQASQGKP--QAQR 298

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHS-----------QHMPTISISKDEVSRG 349
           I+A E+T  VHG E    A       F  ++               +P+I  ++ +    
Sbjct: 299 ILAEEMTRFVHGEEGLASAERITQALFSGNVQQLSLGELKQLELDGLPSIESAQQD---- 354

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
             L+ L++++G A+S   AR H+ +NAI +N   +S +   +    FD
Sbjct: 355 --LVELLIESGLASSKRVAREHISNNAISVNGEKVSADNPSLSFPLFD 400


>gi|86132456|ref|ZP_01051050.1| Tyrosyl-tRNA synthetase [Dokdonia donghaensis MED134]
 gi|85817017|gb|EAQ38201.1| Tyrosyl-tRNA synthetase [Dokdonia donghaensis MED134]
          Length = 431

 Score =  283 bits (724), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 154/427 (36%), Positives = 240/427 (56%), Gaps = 23/427 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG +H      E  ++  + + +AY+G+D TA SLH G+L  +MLL   Q+ 
Sbjct: 4   NFVEELKWRGMVHDAMPQTEEHLM--EAMRSAYVGFDPTADSLHIGNLVPIMLLAHFQRA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG-KTDALM 125
           GH+P++L+GG T +IGDPS +   R ++  + ++ N E ++   S F+ + +G +  ALM
Sbjct: 62  GHRPVALVGGATGMIGDPSGKSSERNLLDEETLRHNQECVRKQLSQFLDFTSGAQNQALM 121

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQS--LSFLEFNYMILQAYD 183
           +NN  W+    ++D +R++G   +VN M++ +SV++RL  E +  +SF EF Y ++Q +D
Sbjct: 122 VNNYDWMKEFSFLDFIRDVGKHITVNYMMAKDSVKNRLTGESADGMSFTEFTYQMVQGFD 181

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ L KN DC LQMGGSDQWGNI  G +L  R+   K +ALT PL+T + G+K GK+  G
Sbjct: 182 FLHLYKNNDCTLQMGGSDQWGNITTGTELIRRIAGGKGYALTCPLITKSDGSKFGKSEGG 241

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEA--KKI 301
            +WL+   TSPY F+QYW N  D D   + K  T L   EI+ + +   +  ++   +K 
Sbjct: 242 NVWLDANRTSPYKFYQYWLNTSDEDAAKYIKIFTFLDREEIEALIETHKEAPHQRALQKR 301

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDEVS 347
           +A E+TT VH  E   KA  A+   F  S                 + +P   I+K E+ 
Sbjct: 302 LAEEVTTTVHDEEALTKAIAASNMLFGKSTSEDLKSLDEATFLDVFEGVPQAEIAKTEIE 361

Query: 348 RGMGLL-TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+ ++  L  K GF  S  EARR LK N+I +N   +  ++  I+  D  +   I L  
Sbjct: 362 AGLDMIAALAEKTGFLKSNGEARRALKENSISLNKEKVGEDR-TIQSSDLINDTFILLQR 420

Query: 407 GKKNHII 413
           GKKN+ +
Sbjct: 421 GKKNYFL 427


>gi|212712058|ref|ZP_03320186.1| hypothetical protein PROVALCAL_03135 [Providencia alcalifaciens DSM
           30120]
 gi|212685580|gb|EEB45108.1| hypothetical protein PROVALCAL_03135 [Providencia alcalifaciens DSM
           30120]
          Length = 428

 Score =  283 bits (724), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 151/385 (39%), Positives = 217/385 (56%), Gaps = 11/385 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           ++ +  L ERG + Q+++   L    +QG ++ Y G+D TA SLH GHL  L+ L   Q 
Sbjct: 8   NNLIKQLQERGLVAQVTDEDALAERLAQGPISLYCGFDPTADSLHLGHLVPLLCLKRFQL 67

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++  ++ +QE +EKI+   S F+ +  G+  A +
Sbjct: 68  AGHKPVALVGGATGLIGDPSFKATERKLNTTETVQEWVEKIRNQVSPFLSFDCGENSARL 127

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYDF 184
            NN  W   +  +  LR+IG  FSVN+M++ ESV+ RL R+   +SF EF Y +LQ YDF
Sbjct: 128 ANNYDWFGKMDVLTFLRDIGKHFSVNQMINRESVKQRLNRDDVGISFTEFAYNLLQGYDF 187

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             + K     LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T   GTK GKT  GA
Sbjct: 188 ANMNKEMGVELQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKTDGTKFGKTEGGA 247

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKI 301
           +WL+ + TS Y F+Q+W N  DADV  F K  T + +SEID +    K  GK    A+ +
Sbjct: 248 VWLDPKKTSQYKFYQFWINTADADVYRFLKFFTFMELSEIDALEEEDKNSGK-APRAQYV 306

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTL 355
           +A E+T +VHG      A       F  ++        + +    I    +  G  L   
Sbjct: 307 LAEEVTKLVHGEAGLAAAKRITESLFSGAVSDLTEADFEQLAQDGIPCIALEDGADLQQA 366

Query: 356 IVKAGFATSTNEARRHLKSNAIKIN 380
           +V +  A S  +AR  + SNA+ IN
Sbjct: 367 LVDSELAPSRGQARTAISSNAVSIN 391


>gi|148998105|ref|ZP_01825618.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae SP11-BS70]
 gi|225859855|ref|YP_002741365.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae 70585]
 gi|307068712|ref|YP_003877678.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae AP200]
 gi|254783642|sp|C1CAS7|SYY_STRP7 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|147756115|gb|EDK63158.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae SP11-BS70]
 gi|225721708|gb|ACO17562.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae 70585]
 gi|306410249|gb|ADM85676.1| Tyrosyl-tRNA synthetase [Streptococcus pneumoniae AP200]
          Length = 418

 Score =  283 bits (723), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 155/417 (37%), Positives = 232/417 (55%), Gaps = 21/417 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG I Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  GHKP 
Sbjct: 7   LKDRGLIFQTTDEEALRKALEEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAGHKPY 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+D  R +     +   ++ I+G  S F+ +  G+  A+M+NN  W
Sbjct: 67  ALVGGATGLIGDPSFKDAERSLQTKDTVDGWVKSIQGQLSRFLDFENGENKAVMVNNYDW 126

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
             SI +ID LR+IG +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF  L +++
Sbjct: 127 FGSISFIDFLRDIGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFFVLNQDH 184

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
           +  LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WLN E 
Sbjct: 185 NVTLQIGGSDQWGNMTAGTELLRRKADKTGHVITVPLITDATGKKFGKSEGNAVWLNPEK 244

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATEITTM 309
           TSPY  +Q+W N+ DAD V F K  T L + EI+ + K      +E  A+K++A E+ T+
Sbjct: 245 TSPYEMYQFWMNVMDADAVRFLKIFTFLSLDEIEDIRKQFEAAPHERLAQKVLAREVVTL 304

Query: 310 VHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIVKA 359
           VHG E  ++A     + F  +I +          + +P   +  DE +    ++ L+V +
Sbjct: 305 VHGEEAYKEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVQADEHN---NIVELLVSS 361

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN--IKLSFGKKNHIIC 414
           G   S  +AR  +++ AI +N   I +  L   L D D   N    +  GKK + + 
Sbjct: 362 GIVNSKRQAREDVQNGAIYVNGDRIQD--LDYVLSDADKLENELTVIRRGKKKYFVL 416


>gi|138896346|ref|YP_001126799.1| tyrosyl-tRNA synthetase [Geobacillus thermodenitrificans NG80-2]
 gi|196249972|ref|ZP_03148667.1| tyrosyl-tRNA synthetase [Geobacillus sp. G11MC16]
 gi|134267859|gb|ABO68054.1| Tyrosyl-tRNA synthetase [Geobacillus thermodenitrificans NG80-2]
 gi|196210486|gb|EDY05250.1| tyrosyl-tRNA synthetase [Geobacillus sp. G11MC16]
          Length = 419

 Score =  283 bits (723), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 157/393 (39%), Positives = 224/393 (56%), Gaps = 19/393 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + L  L  RG ++Q ++   L  L ++  VT Y G+D TA SLH GHL  +M L   Q+ 
Sbjct: 2   NLLEELQWRGLVNQTTDEDGLRKLLNEEKVTLYCGFDPTADSLHIGHLVTIMTLRRFQQA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI+L+GG T +IGDPS R   R +   + ++    +IK     F+ +      A + 
Sbjct: 62  GHQPIALVGGATGLIGDPSGRKSERTLNAKETVETWSARIKAQLERFLDFEAESNPAKIK 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W+  +  I  LR+IG  FSVN ML+ ESV+SR+  E  +SF EF+YM+LQAYDF+ 
Sbjct: 122 NNYDWIGPLDVISFLRDIGKHFSVNYMLAKESVQSRI--EMGISFTEFSYMMLQAYDFLN 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASGTKMGKTLSGAI 245
           L +   CRLQ+GGSDQWGNI  G++L  R K   K F LT PL+T A GTK GKT SGA+
Sbjct: 180 LYETEGCRLQIGGSDQWGNITAGLELIRRTKGEAKAFGLTVPLVTKADGTKFGKTESGAV 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIA 303
           WL+ E TSPY F+Q+W N DD DV+ + K  T L   EID + +   +  E   A+K +A
Sbjct: 240 WLDPEKTSPYEFYQFWINTDDRDVIRYLKYFTFLTKEEIDALEQELREAPEKRVAQKTLA 299

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLL 353
           +E+T +VHG E   +A   +   F   I            +++P+      +V     L+
Sbjct: 300 SEVTKLVHGEEALNQAIRISEALFSGDIAELTAAEIEQGFKNVPSFVHEGGDVP----LV 355

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISN 386
            L+V AG + S  +AR  +++ AI +N   I +
Sbjct: 356 ELLVAAGISPSKRQAREDVQNGAIYVNGERIQD 388


>gi|254480849|ref|ZP_05094095.1| tyrosyl-tRNA synthetase [marine gamma proteobacterium HTCC2148]
 gi|214038644|gb|EEB79305.1| tyrosyl-tRNA synthetase [marine gamma proteobacterium HTCC2148]
          Length = 431

 Score =  283 bits (723), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 156/395 (39%), Positives = 220/395 (55%), Gaps = 20/395 (5%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S  L  L  RG I QI+   +L      G  T Y G+D TA SLH G L  L++L   Q 
Sbjct: 3   SALLEDLRARGLIFQIAGEDDLPAWLDGGPRTLYCGFDPTADSLHIGSLVPLLMLRRFQL 62

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+ + R++     +   ++K+K   + FI +  G   A +
Sbjct: 63  AGHKPLALVGGATGLIGDPSFKTQERQLNTPDIVANWVDKLKAQVARFIDFDAGSVAAEV 122

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQS-LSFLEFNYMILQAYDF 184
           +NN  W   +  +  LR+IG  FS+N M+  ESV+ R++RE S +SF EF YMILQ+YDF
Sbjct: 123 VNNLDWTEHMDVLTFLRDIGKHFSINAMIQKESVKQRIEREGSGISFTEFTYMILQSYDF 182

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
            EL K +DC LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT +G 
Sbjct: 183 AELNKRHDCTLQLGGSDQWGNITGGIDLTRRLNGNQVFGLTMPLITKSDGTKFGKTEAGT 242

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM----AKLQGKEINEAKK 300
           IWL+   TSPY F+Q+W    DADV  F K  T L ++EI+ +    A  +G+   EA+ 
Sbjct: 243 IWLDAAKTSPYAFYQFWLGCSDADVYRFLKYFTFLEVAEINAIEQADAAREGRP--EAQA 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHS-----------QHMPTISISKDEVSRG 349
           ++A E+T +VHG E    A       F  SI               +P   +S+ +    
Sbjct: 301 VLAREVTHLVHGEEGLAAAVRITESLFSGSIEGLAEGDLAQLRQDGLPASHVSRSQFPE- 359

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSII 384
             L  L+ + G A S  + +  L  +A+ IN+  +
Sbjct: 360 -TLTQLLTEVGMAGSGKQVKDALGRSAVTINSRAV 393


>gi|41582351|gb|AAS07965.1| tyrosyl-tRNA synthetase [uncultured marine bacterium 463]
          Length = 431

 Score =  283 bits (723), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 157/395 (39%), Positives = 219/395 (55%), Gaps = 20/395 (5%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S  L  L  RG I QI+   +L      G  T Y G+D TA SLH G L  L++L   Q 
Sbjct: 3   SALLEDLRARGLIFQIAGEDDLPAWLDGGPRTLYCGFDPTADSLHIGSLVPLLMLRRFQL 62

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+ + R++     +   ++K+K   + FI +  G   A +
Sbjct: 63  AGHKPLALVGGATGLIGDPSFKTQERQLNTPDIVANWVDKLKAQVARFIDFDAGSVAAEV 122

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQS-LSFLEFNYMILQAYDF 184
           +NN  W   +  +  LR+IG  FS+N M+  ESV+ R++RE S +SF EF YMILQ+YDF
Sbjct: 123 VNNLDWTEHMDVLTFLRDIGKHFSINAMIQKESVKQRIEREGSGISFTEFTYMILQSYDF 182

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
            EL K +DC LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT +G 
Sbjct: 183 AELNKRHDCTLQLGGSDQWGNITGGIDLTRRLNGNQVFGLTMPLITKSDGTKFGKTEAGT 242

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM----AKLQGKEINEAKK 300
           IWL+   TSPY F+Q+W    DADV  F K  T L +SEI+ +    A  +G+   EA+ 
Sbjct: 243 IWLDAAKTSPYAFYQFWLGCSDADVYRFLKYFTFLEVSEINAIEQADAAREGRP--EAQA 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHS-----------QHMPTISISKDEVSRG 349
           ++A E+T +VHG E    A       F  SI               +P   +S+ +    
Sbjct: 301 VLAREVTRLVHGEEGLAAAVRITESLFSGSIEGLAEGDLAQLRQDGLPASHVSRSQFPE- 359

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSII 384
             L  L+ + G A S  + +  L   A+ IN+  +
Sbjct: 360 -TLTQLLTEVGMAGSGKQVKDALGRCAVTINSRAV 393


>gi|218258724|ref|ZP_03475033.1| hypothetical protein PRABACTJOHN_00688 [Parabacteroides johnsonii
           DSM 18315]
 gi|218225250|gb|EEC97900.1| hypothetical protein PRABACTJOHN_00688 [Parabacteroides johnsonii
           DSM 18315]
          Length = 430

 Score =  283 bits (723), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 155/427 (36%), Positives = 240/427 (56%), Gaps = 22/427 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L+ RG I  +    E  +   + + +AY+G D TA SLH GHL  +M+L  LQ+ 
Sbjct: 2   NFVEELTWRGMIADMMPGTEEQL--QKEMTSAYVGIDPTADSLHIGHLVSVMMLKHLQRA 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL-M 125
           GH+PI+L+GG T +IGDPS +   R ++    ++ N + IK   S F+ + +   +A  +
Sbjct: 60  GHRPIALVGGATGMIGDPSMKSAERNLLDEATLRHNQDSIKKQLSKFLDFDSDAPNAAKL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQS--LSFLEFNYMILQAYD 183
           +NN  W+    +++ +R+IG   +VN M++ ESV+ RL RE S  +SF EF+Y +LQ YD
Sbjct: 120 VNNYDWMKDYSFLNFIRDIGKHITVNYMMAKESVKKRLSRESSVGMSFTEFSYQLLQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           ++ L ++  CRLQMGG+DQWGNI  G +L  R    + FALT PL+T A G K GKT SG
Sbjct: 180 YMYLYEHEGCRLQMGGTDQWGNITTGTELIRRKLGGEAFALTCPLITKADGGKFGKTESG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKKI 301
            +WL++  TSPY F+Q+W N+ DAD   + K  T LP  EID + K Q     +   +K 
Sbjct: 240 NVWLDRRYTSPYKFYQFWLNVSDADAAKYIKIFTDLPKDEIDALIKEQEEAPHLRPLQKR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS--QHM------------PTISISKDEVS 347
           +A E+T MVH +E+ + A  A+   F  S     +H+            P   +S+DE+S
Sbjct: 300 LAKEVTIMVHSQEDYDAAVEASNILFGNSTSEALKHLDEQTLLDVFNGVPQFEVSRDELS 359

Query: 348 RGMGLLTLIV-KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+  + L   KA    S  E R+ ++S  I +N   ++++ + I          + +  
Sbjct: 360 AGVKAIDLFTEKAAIFPSKGEMRKLVQSGGISVNKEKLTDQDMVIDCSSLLDEKYLLVQR 419

Query: 407 GKKNHII 413
           GKKN+ +
Sbjct: 420 GKKNYYL 426


>gi|282599716|ref|ZP_05971609.2| tyrosine--tRNA ligase [Providencia rustigianii DSM 4541]
 gi|282568354|gb|EFB73889.1| tyrosine--tRNA ligase [Providencia rustigianii DSM 4541]
          Length = 428

 Score =  283 bits (723), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 156/390 (40%), Positives = 224/390 (57%), Gaps = 21/390 (5%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           ++ +  L ERG + Q+++   L    +QG ++ Y G+D TA SLH GHL  L+ L   Q 
Sbjct: 8   NNLIKQLQERGLVAQVTDEDALAERLAQGPISLYCGFDPTADSLHLGHLVPLLCLKRFQL 67

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++  ++ +QE +EKI+   S F+ +  G   A +
Sbjct: 68  AGHKPVALVGGATGLIGDPSFKATERKLNTAETVQEWVEKIRNQVSPFLSFDCGDNSARL 127

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYDF 184
            NN  W   +  +  LR+IG  FSVN+M++ ESV+ RL R+   +SF EF Y +LQ YDF
Sbjct: 128 ANNYDWFGKMDVLTFLRDIGKHFSVNQMINRESVKQRLNRDDVGISFTEFAYNLLQGYDF 187

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             + K     LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 188 ANMNKEMGVELQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 247

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKI 301
           +WL+ + TS Y F+Q+W N  DADV  F K  T + +SEI+ +    K  GK    A+ +
Sbjct: 248 VWLDPKKTSQYKFYQFWINTADADVYRFLKFFTFMELSEINALEEEDKNSGK-APRAQYV 306

Query: 302 IATEITTMVHGR----------EEAEKAATAAMECFDMSIHSQH-MPTISISKDEVSRGM 350
           +A ++T +VHG           E     A + +   D+   +Q  MP I++   EV  G 
Sbjct: 307 LAEQVTKLVHGEAGLAAAKRITESLFSGAVSDLTEADLEQLAQDGMPNITL---EV--GA 361

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKIN 380
            L   +V +  A S  +AR  + SNA+ IN
Sbjct: 362 DLQQALVDSELAPSRGQARTAISSNAVSIN 391


>gi|59800530|ref|YP_207242.1| putative tyrosyl-tRNA synthase [Neisseria gonorrhoeae FA 1090]
 gi|194097676|ref|YP_002000716.1| putative tyrosyl-tRNA synthase [Neisseria gonorrhoeae NCCP11945]
 gi|240013380|ref|ZP_04720293.1| putative tyrosyl-tRNA synthase [Neisseria gonorrhoeae DGI18]
 gi|240015823|ref|ZP_04722363.1| putative tyrosyl-tRNA synthase [Neisseria gonorrhoeae FA6140]
 gi|240112169|ref|ZP_04726659.1| putative tyrosyl-tRNA synthase [Neisseria gonorrhoeae MS11]
 gi|240114915|ref|ZP_04728977.1| putative tyrosyl-tRNA synthase [Neisseria gonorrhoeae PID18]
 gi|240120452|ref|ZP_04733414.1| putative tyrosyl-tRNA synthase [Neisseria gonorrhoeae PID24-1]
 gi|240122752|ref|ZP_04735708.1| putative tyrosyl-tRNA synthase [Neisseria gonorrhoeae PID332]
 gi|240127455|ref|ZP_04740116.1| putative tyrosyl-tRNA synthase [Neisseria gonorrhoeae SK-93-1035]
 gi|254492974|ref|ZP_05106145.1| tyrosyl-tRNA synthetase [Neisseria gonorrhoeae 1291]
 gi|260441270|ref|ZP_05795086.1| putative tyrosyl-tRNA synthase [Neisseria gonorrhoeae DGI2]
 gi|268598226|ref|ZP_06132393.1| tyrosyl-tRNA synthetase [Neisseria gonorrhoeae MS11]
 gi|268600572|ref|ZP_06134739.1| tyrosyl-tRNA synthetase [Neisseria gonorrhoeae PID18]
 gi|268681354|ref|ZP_06148216.1| tyrosyl-tRNA synthetase [Neisseria gonorrhoeae PID332]
 gi|268685831|ref|ZP_06152693.1| tyrosyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035]
 gi|291044618|ref|ZP_06570327.1| tyrosyl-tRNA synthetase [Neisseria gonorrhoeae DGI2]
 gi|293397737|ref|ZP_06641943.1| tyrosyl-tRNA synthetase [Neisseria gonorrhoeae F62]
 gi|75356465|sp|Q5FAF7|SYY_NEIG1 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|254783619|sp|B4RP13|SYY_NEIG2 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|59717425|gb|AAW88830.1| putative tyrosyl-tRNA synthase [Neisseria gonorrhoeae FA 1090]
 gi|193932966|gb|ACF28790.1| putative tyrosyl-tRNA synthase [Neisseria gonorrhoeae NCCP11945]
 gi|226512014|gb|EEH61359.1| tyrosyl-tRNA synthetase [Neisseria gonorrhoeae 1291]
 gi|268582357|gb|EEZ47033.1| tyrosyl-tRNA synthetase [Neisseria gonorrhoeae MS11]
 gi|268584703|gb|EEZ49379.1| tyrosyl-tRNA synthetase [Neisseria gonorrhoeae PID18]
 gi|268621638|gb|EEZ54038.1| tyrosyl-tRNA synthetase [Neisseria gonorrhoeae PID332]
 gi|268626115|gb|EEZ58515.1| tyrosyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035]
 gi|291011512|gb|EFE03508.1| tyrosyl-tRNA synthetase [Neisseria gonorrhoeae DGI2]
 gi|291611683|gb|EFF40752.1| tyrosyl-tRNA synthetase [Neisseria gonorrhoeae F62]
          Length = 431

 Score =  283 bits (723), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 155/380 (40%), Positives = 219/380 (57%), Gaps = 14/380 (3%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I Q ++   LD L ++  +  Y G+D TA SLH GHL  ++ L   Q+ GH PI
Sbjct: 7   LQSRGLIAQTTDIEALDALLNEQKIALYCGFDPTADSLHIGHLLPVLALRRFQQAGHTPI 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+   R +  ++ +   +  I+   + F+ +  G   A+M NN  W
Sbjct: 67  ALVGGATGMIGDPSFKAAERSLNSAETVAGWVGSIRSQLTPFLSF-EGGNAAIMANNADW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQS-LSFLEFNYMILQAYDFVELAKN 190
             S+  +D LR+IG  FSVN ML+ ESV+ R+ R+ + +SF EF Y +LQ YDF EL K 
Sbjct: 126 FGSMNCLDFLRDIGKHFSVNAMLNKESVKQRIDRDGAGISFTEFAYSLLQGYDFAELNKR 185

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKE 250
           +   L++GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  GA+WLN +
Sbjct: 186 HGAVLEIGGSDQWGNITAGIDLTRRLNQKQVFGLTLPLVTKSDGTKFGKTEGGAVWLNAK 245

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKIIATEIT 307
            TSPY F+Q+W  + DADV  F K  T L + EI   +   K  G +  EA++I+A E+T
Sbjct: 246 KTSPYQFYQFWLKVADADVYKFLKYFTFLSIEEIGVVEAKDKASGSK-PEAQRILAEEMT 304

Query: 308 TMVHGREEAEKAATAAMECFDMSIHS-------QHMPTISISKDEVSRGMGLLTLIVKAG 360
            ++HG EEA  AA    E       S       + +    +   EVS G+  +  +VK G
Sbjct: 305 RLIHG-EEALAAAQRISESLFAEDQSRLTESDFEQLALDGLPAFEVSDGINAVEALVKTG 363

Query: 361 FATSTNEARRHLKSNAIKIN 380
            A S  EAR  + + A+ +N
Sbjct: 364 LAASNKEARGFVNAKAVLLN 383


>gi|239998197|ref|ZP_04718121.1| putative tyrosyl-tRNA synthase [Neisseria gonorrhoeae 35/02]
 gi|240124945|ref|ZP_04737831.1| putative tyrosyl-tRNA synthase [Neisseria gonorrhoeae SK-92-679]
 gi|268594051|ref|ZP_06128218.1| tyrosyl-tRNA synthetase [Neisseria gonorrhoeae 35/02]
 gi|268683524|ref|ZP_06150386.1| tyrosyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679]
 gi|268547440|gb|EEZ42858.1| tyrosyl-tRNA synthetase [Neisseria gonorrhoeae 35/02]
 gi|268623808|gb|EEZ56208.1| tyrosyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679]
 gi|317163484|gb|ADV07025.1| putative tyrosyl-tRNA synthase [Neisseria gonorrhoeae TCDC-NG08107]
          Length = 431

 Score =  283 bits (723), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 155/380 (40%), Positives = 219/380 (57%), Gaps = 14/380 (3%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I Q ++   LD L ++  +  Y G+D TA SLH GHL  ++ L   Q+ GH PI
Sbjct: 7   LQSRGLIAQTTDIEALDALLNEQKIALYCGFDPTADSLHIGHLLPVLALRRFQQAGHTPI 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+   R +  ++ +   +  I+   + F+ +  G   A+M NN  W
Sbjct: 67  ALVGGATGMIGDPSFKAAERSLNSAETVAGWVGSIRSQLTPFLSF-EGGNAAIMANNADW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQS-LSFLEFNYMILQAYDFVELAKN 190
             S+  +D LR+IG  FSVN ML+ ESV+ R+ R+ + +SF EF Y +LQ YDF EL K 
Sbjct: 126 FGSMNCLDFLRDIGKHFSVNAMLNKESVKQRIDRDGAGISFTEFAYSLLQGYDFAELNKR 185

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKE 250
           +   L++GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  GA+WLN +
Sbjct: 186 HGAVLEIGGSDQWGNITAGIDLTRRLNQKQVFGLTLPLVTKSDGTKFGKTEGGAVWLNAK 245

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSE---IDRMAKLQGKEINEAKKIIATEIT 307
            TSPY F+Q+W  + DADV  F K  T L + E   I+   K  G +  EA++I+A E+T
Sbjct: 246 KTSPYQFYQFWLKVADADVYKFLKYFTFLSIEEIGVIEAKDKASGSK-PEAQRILAEEMT 304

Query: 308 TMVHGREEAEKAATAAMECFDMSIHS-------QHMPTISISKDEVSRGMGLLTLIVKAG 360
            ++HG EEA  AA    E       S       + +    +   EVS G+  +  +VK G
Sbjct: 305 RLIHG-EEALAAAQRISESLFAEDQSRLTESDFEQLALDGLPAFEVSDGINAVEALVKTG 363

Query: 361 FATSTNEARRHLKSNAIKIN 380
            A S  EAR  + + A+ +N
Sbjct: 364 LAASNKEARGFVNAKAVLLN 383


>gi|300716511|ref|YP_003741314.1| Tyrosyl-tRNA synthetase [Erwinia billingiae Eb661]
 gi|299062347|emb|CAX59464.1| Tyrosyl-tRNA synthetase [Erwinia billingiae Eb661]
          Length = 424

 Score =  283 bits (723), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 150/385 (38%), Positives = 219/385 (56%), Gaps = 11/385 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG I Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q 
Sbjct: 4   SNLIKQLQERGLIAQVTDEDALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQD 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+P++L+GG T +IGDPSF+ + R++  S+ + E +EKI+   + F+ +  G   A+ 
Sbjct: 64  AGHRPVALVGGATGLIGDPSFKADERKLNTSETVGEWVEKIRHQVAPFLDFDCGDNSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDF 184
            NN  W  ++  +  LR+IG  FSVN+M++ E+V+ RL R+ Q +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDQGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L + +   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  GA
Sbjct: 184 ACLNERHGVALQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKSDGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKI 301
           +WL+   TSPY F+Q+W N  DADV  F K  T + + EI+ +    K  GK    A+ +
Sbjct: 244 VWLDASKTSPYKFYQFWINTADADVYRFLKFFTFMSLEEINALEEEDKNSGK-APRAQYV 302

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTL 355
           +A  +T +VHG E    A       F  S+        + +    I    + R   L   
Sbjct: 303 LAERVTRLVHGEEGLAAAERITKSLFSGSLSEMTEADFEQLAQDGIPFVALDRDQDLQQA 362

Query: 356 IVKAGFATSTNEARRHLKSNAIKIN 380
           +V    A S  +AR+ ++S A+ IN
Sbjct: 363 MVDGDLAPSRGQARKLIESKAVSIN 387


>gi|307710959|ref|ZP_07647382.1| tyrosyl-tRNA synthetase [Streptococcus mitis SK321]
 gi|307617199|gb|EFN96376.1| tyrosyl-tRNA synthetase [Streptococcus mitis SK321]
          Length = 418

 Score =  283 bits (723), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 155/417 (37%), Positives = 231/417 (55%), Gaps = 21/417 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L ERG I Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  GHKP 
Sbjct: 7   LKERGLIFQTTDEEALRKALEEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAGHKPY 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+D  R +     +   ++ I+G  S F+ +  G+  A+M+NN  W
Sbjct: 67  ALVGGATGLIGDPSFKDAERSLQTKDTVDGWVKSIQGQLSRFLDFENGENKAVMVNNYDW 126

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
             SI +ID LR+IG +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF  L +++
Sbjct: 127 FGSISFIDFLRDIGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFFVLNQDH 184

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
           +  LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WLN E 
Sbjct: 185 NVTLQIGGSDQWGNMTAGTELLRRKADKTGHVITVPLITDATGKKFGKSEGNAVWLNPEK 244

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATEITTM 309
           TSPY  +Q+W N+ DAD V F K  T L + EI+ + K      +E  A+K++A E+ T+
Sbjct: 245 TSPYEMYQFWMNVMDADAVRFLKIFTFLSLDEIEDIRKQFEAAPHERLAQKVLAREVVTL 304

Query: 310 VHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIVKA 359
           VHG E  ++A     + F  +I +          + +P   +  +E      ++ L+V +
Sbjct: 305 VHGEEAYKEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVQAEE---NHNIVELLVSS 361

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN--IKLSFGKKNHIIC 414
           G   S  +AR  +++ AI +N   I +  L   L D D   N    +  GKK + + 
Sbjct: 362 GVVNSKRQAREDVQNGAIYVNGDRIQD--LDYVLSDADKLENELTVIRRGKKKYFVL 416


>gi|311069466|ref|YP_003974389.1| tyrosyl-tRNA synthetase [Bacillus atrophaeus 1942]
 gi|310869983|gb|ADP33458.1| tyrosyl-tRNA synthetase [Bacillus atrophaeus 1942]
          Length = 422

 Score =  282 bits (722), Expect = 6e-74,   Method: Compositional matrix adjust.
 Identities = 153/389 (39%), Positives = 230/389 (59%), Gaps = 19/389 (4%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           ++ L  LS RG I QI++   L+   ++  +  Y G+D TA SLH GHL  ++ L   Q 
Sbjct: 2   ANLLEDLSFRGLIQQITDEEGLNKQLNEDKIRLYSGFDPTADSLHIGHLLPILTLRRFQL 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH PI+L+GG T +IGDPS +   R +  +  + E  +KIK   S F+ +   +  A+M
Sbjct: 62  AGHHPIALVGGATGLIGDPSGKKAERTLNTADIVVEWSQKIKNQLSRFLDFDATENPAVM 121

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
            NN  W+  +  ID LR++G  F +N ML+ ++V SR+  E  +S+ EF+YMILQ++DF+
Sbjct: 122 ANNFDWIGKMNVIDFLRDVGKNFGINYMLAKDTVSSRI--ESGISYTEFSYMILQSFDFL 179

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKLFALTSPLLTTASGTKMGKTLSG 243
            L ++  C+LQ+GGSDQWGNI  G++L  + +    K F LT PL+T A GTK GKT  G
Sbjct: 180 NLYRDQGCKLQIGGSDQWGNITAGLELIRKSEEEGAKAFGLTIPLVTKADGTKFGKTEGG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKI 301
           AIWL+KE TSPY F+Q+W N DD DVV + K  T L   EI+  A+      E  EA+K 
Sbjct: 240 AIWLDKEKTSPYEFYQFWINTDDRDVVKYLKYFTFLSKEEIEAYAEKTETAPEKREAQKR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECF----------DMSIHSQHMPTISISKDEVSRGMG 351
           +A E+T +VHGRE  E+A   +   F          D+ +  + +P++     E S+ + 
Sbjct: 300 LAEEVTELVHGREALEQAINISQALFSGNIKELSAQDVKVGFKDVPSLEA---ERSQELT 356

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKIN 380
           L+ ++V++  + S  +AR  +K+ A+ IN
Sbjct: 357 LVDVLVESKLSPSKRQAREDIKNGAVYIN 385


>gi|322375991|ref|ZP_08050501.1| tyrosine--tRNA ligase [Streptococcus sp. C300]
 gi|321278941|gb|EFX55984.1| tyrosine--tRNA ligase [Streptococcus sp. C300]
          Length = 418

 Score =  282 bits (722), Expect = 7e-74,   Method: Compositional matrix adjust.
 Identities = 147/387 (37%), Positives = 220/387 (56%), Gaps = 17/387 (4%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L ERG I Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  GHKP 
Sbjct: 7   LKERGLIFQTTDEEALRKALEEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAGHKPY 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+D  R +     ++  ++ I+G  S F+ +  G+  A+M+NN  W
Sbjct: 67  ALVGGATGLIGDPSFKDAERSLQTKDTVEGWVKSIQGQLSRFLDFENGENKAVMVNNYDW 126

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
             SI +ID LR++G +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF  L + +
Sbjct: 127 FGSISFIDFLRDVGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFYVLNQEH 184

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
           +  LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WLN E 
Sbjct: 185 NVTLQIGGSDQWGNMTAGTELLRRKADKTGHVITVPLITDATGKKFGKSEGNAVWLNPEK 244

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATEITTM 309
           TSPY  +Q+W N+ DAD V F K  T L + EI+ + K      +E  A+K++A E+ T+
Sbjct: 245 TSPYEMYQFWMNVMDADAVRFLKIFTFLSLDEIEDIRKQFEAAPHERLAQKVLAREVVTL 304

Query: 310 VHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIVKA 359
           VHG E  ++A     + F  +I +          + +P   +  DE      ++ L+V +
Sbjct: 305 VHGEEAYKEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVQADE---NHNIVELLVSS 361

Query: 360 GFATSTNEARRHLKSNAIKINNSIISN 386
           G   S  +AR  +++ AI +N   I +
Sbjct: 362 GVVNSKRQAREDVQNGAIYVNGDRIQD 388


>gi|321312505|ref|YP_004204792.1| tyrosyl-tRNA synthetase [Bacillus subtilis BSn5]
 gi|291485399|dbj|BAI86474.1| tyrosyl-tRNA synthetase [Bacillus subtilis subsp. natto BEST195]
 gi|320018779|gb|ADV93765.1| tyrosyl-tRNA synthetase [Bacillus subtilis BSn5]
          Length = 422

 Score =  282 bits (721), Expect = 7e-74,   Method: Compositional matrix adjust.
 Identities = 149/389 (38%), Positives = 233/389 (59%), Gaps = 19/389 (4%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           ++ L  LS RG I Q+++   L+   ++  +  Y G+D TA SLH GHL  ++ L   Q 
Sbjct: 2   TNLLEDLSFRGLIQQMTDEEGLNKQLNEEKIRLYSGFDPTADSLHIGHLLPILTLRRFQL 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH PI+L+GG T +IGDPS +   R +  +  + E  +KIK   S F+ +   +  A++
Sbjct: 62  AGHHPIALVGGATGLIGDPSGKKAERTLNTADIVSEWSQKIKNQLSRFLDFEAAENPAVI 121

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
            NN  W+  +  ID LR++G  F +N ML+ ++V SR+  E  +S+ EF+YMILQ+YDF+
Sbjct: 122 ANNFDWIGKMNVIDFLRDVGKNFGINYMLAKDTVSSRI--ESGISYTEFSYMILQSYDFL 179

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKLFALTSPLLTTASGTKMGKTLSG 243
            L ++ +C+LQ+GGSDQWGNI  G++L  + +    K F LT PL+T A GTK GKT  G
Sbjct: 180 NLYRDKNCKLQIGGSDQWGNITAGLELIRKSEEEGAKAFGLTIPLVTKADGTKFGKTEGG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKI 301
           AIWL+KE TSPY F+Q+W N DD DVV + K  T L   EI+  A+      E  EA+K 
Sbjct: 240 AIWLDKEKTSPYEFYQFWINTDDRDVVKYLKYFTFLSKEEIEAYAEKTETAPEKREAQKR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECF----------DMSIHSQHMPTISISKDEVSRGMG 351
           +A E+T++VHGRE  E+A   +   F          D+ +  + +P++ +   + ++ + 
Sbjct: 300 LAEEVTSLVHGREALEQAINISQALFSGNIKELSAQDVKVGFKDVPSMEV---DSTQELS 356

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKIN 380
           L+ ++V++  + S  +AR  +++ A+ IN
Sbjct: 357 LVDVLVQSKLSPSKRQAREDIQNGAVYIN 385


>gi|295132372|ref|YP_003583048.1| tyrosyl-tRNA synthetase [Zunongwangia profunda SM-A87]
 gi|294980387|gb|ADF50852.1| tyrosyl-tRNA synthetase [Zunongwangia profunda SM-A87]
          Length = 431

 Score =  282 bits (721), Expect = 7e-74,   Method: Compositional matrix adjust.
 Identities = 158/427 (37%), Positives = 232/427 (54%), Gaps = 23/427 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L+ RG IH +  P   + L  Q +  AY+G D TA SLH GHL  +M+L   Q  
Sbjct: 4   NFVEELTWRGMIHDVM-PGTEEHLNEQ-MRAAYVGIDPTADSLHIGHLVGVMMLRHFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY-GTGKTDALM 125
           GHKP +L+GG T +IGDPS +   R ++    ++ N   IK   S F+ + G  +  A++
Sbjct: 62  GHKPYALVGGATGMIGDPSGKSAERNLLDEATLRHNQNSIKEQLSRFLDFEGAEENTAVL 121

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQS--LSFLEFNYMILQAYD 183
           +NN  W+    ++D +R++G   +VN M++ +SV+ RL  + S  +SF EF Y ++Q YD
Sbjct: 122 VNNYDWMKEFSFLDFIRDVGKHITVNYMMAKDSVKKRLSSDASEGMSFTEFTYQLVQGYD 181

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ L + + C LQMGGSDQWGNI  G ++  R+   K +ALT PL+T A GTK GKT  G
Sbjct: 182 FLHLFREHQCTLQMGGSDQWGNITTGTEMIRRIGDGKGYALTCPLITKADGTKFGKTEGG 241

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKI 301
            IWL+   TSPY F+QYW N  DAD   + K  T L   EI+ +     +   + E +K+
Sbjct: 242 NIWLDANRTSPYKFYQYWLNTSDADAEKYIKIFTFLSKEEIEDLTSKHQEAPHLRELQKV 301

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDEVS 347
           +A E+T MVH  E+   A  A+   F  S                 + +P   +S+ EV 
Sbjct: 302 LAKEVTVMVHSEEDYNNAVKASEVLFGKSTAEDLKSLNEATFLDVFEGVPQAEVSRAEVE 361

Query: 348 RGMGLL-TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+ ++  L  K  F  S  EARR LK N++ +N   +  E   I L D  +   + ++ 
Sbjct: 362 AGLDMIGALAAKTDFLKSNGEARRALKENSVSVNKEKVQ-EDYTISLDDLINDKYVIINK 420

Query: 407 GKKNHII 413
           GKKN  I
Sbjct: 421 GKKNTYI 427


>gi|16080019|ref|NP_390845.1| tyrosyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           168]
 gi|221310911|ref|ZP_03592758.1| tyrosyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           168]
 gi|221315237|ref|ZP_03597042.1| tyrosyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           NCIB 3610]
 gi|221320155|ref|ZP_03601449.1| tyrosyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           JH642]
 gi|221324436|ref|ZP_03605730.1| tyrosyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           SMY]
 gi|135192|sp|P22326|SYY1_BACSU RecName: Full=Tyrosyl-tRNA synthetase 1; AltName:
           Full=Tyrosine--tRNA ligase 1; Short=TyrRS 1
 gi|143795|gb|AAA22878.1| transfer RNA-Tyr synthetase [Bacillus subtilis]
 gi|2293225|gb|AAC00303.1| tyrosine tRNA synthetase [Bacillus subtilis]
 gi|2635451|emb|CAB14945.1| tyrosyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           168]
          Length = 422

 Score =  282 bits (721), Expect = 8e-74,   Method: Compositional matrix adjust.
 Identities = 149/389 (38%), Positives = 233/389 (59%), Gaps = 19/389 (4%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           ++ L  LS RG I Q+++   L+   ++  +  Y G+D TA SLH GHL  ++ L   Q 
Sbjct: 2   TNLLEDLSFRGLIQQMTDEEGLNKQLNEEKIRLYSGFDPTADSLHIGHLLPILTLRRFQL 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH PI+L+GG T +IGDPS +   R +  +  + E  +KIK   S F+ +   +  A++
Sbjct: 62  AGHHPIALVGGATGLIGDPSGKKAERTLNTADIVSEWSQKIKNQLSRFLDFEAAENPAVI 121

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
            NN  W+  +  ID LR++G  F +N ML+ ++V SR+  E  +S+ EF+YMILQ+YDF+
Sbjct: 122 ANNFDWIGKMNVIDFLRDVGKNFGINYMLAKDTVSSRI--ESGISYTEFSYMILQSYDFL 179

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKLFALTSPLLTTASGTKMGKTLSG 243
            L ++ +C+LQ+GGSDQWGNI  G++L  + +    K F LT PL+T A GTK GKT  G
Sbjct: 180 NLYRDKNCKLQIGGSDQWGNITAGLELIRKSEEEGAKAFGLTIPLVTKADGTKFGKTEGG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKI 301
           AIWL+KE TSPY F+Q+W N DD DVV + K  T L   EI+  A+      E  EA+K 
Sbjct: 240 AIWLDKEKTSPYEFYQFWINTDDRDVVKYLKYFTFLSKEEIEAYAEKTETAPEKREAQKR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECF----------DMSIHSQHMPTISISKDEVSRGMG 351
           +A E+T++VHGRE  E+A   +   F          D+ +  + +P++ +   + ++ + 
Sbjct: 300 LAEEVTSLVHGREALEQAINISQALFSGNIKELSAQDVKVGFKDVPSMEV---DSTQELS 356

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKIN 380
           L+ ++V++  + S  +AR  +++ A+ IN
Sbjct: 357 LVDVLVQSKLSPSKRQAREDIQNGAVYIN 385


>gi|153837418|ref|ZP_01990085.1| tyrosyl-tRNA synthetase [Vibrio parahaemolyticus AQ3810]
 gi|149749218|gb|EDM60003.1| tyrosyl-tRNA synthetase [Vibrio parahaemolyticus AQ3810]
          Length = 419

 Score =  282 bits (721), Expect = 8e-74,   Method: Compositional matrix adjust.
 Identities = 153/408 (37%), Positives = 229/408 (56%), Gaps = 26/408 (6%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +  L  L +RG I Q S+  E+  L SQ   T Y G+D TA SLH GHL  L++L   Q 
Sbjct: 3   TPLLQDLQDRGLIAQASDLEEIQTLLSQ-PQTVYCGFDPTAGSLHIGHLVPLIMLKRFQD 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+ ++L+GG T +IGDPSF+   R +  ++ +   +  +       + +   K   +M
Sbjct: 62  AGHQAVALIGGATGMIGDPSFKATERSLNSAEIVSGWVNDLSNQIQQLMNHQLSKP-MIM 120

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDF 184
           +NN  W+ +I  ID  R++G  FS+N M++ ESV+ RL+R +Q +SF EF+Y +LQ+YDF
Sbjct: 121 VNNADWMKAINVIDFFRDVGKHFSINTMINRESVKQRLQRPDQGISFTEFSYALLQSYDF 180

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
            EL + Y CRLQ+GG+DQWGNI+ GIDL  R    ++F LT PL+T + GTK GKT  GA
Sbjct: 181 AELNRQYGCRLQIGGNDQWGNIVSGIDLTRRQNGEQVFGLTLPLITKSDGTKFGKTEGGA 240

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL----QGKEINEAKK 300
           +WL+   TSPY F+Q+W   +DADV  F +  T L   EI  +       QGK   +A++
Sbjct: 241 VWLDPSKTSPYAFYQFWLGAEDADVYHFLRYYTFLSCEEIASIEAQDQASQGKP--QAQR 298

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHS-----------QHMPTISISKDEVSRG 349
           I+A E+T  VHG E    A       F  ++               +P+I  ++ +    
Sbjct: 299 ILAEEMTRFVHGEEGLASAERITQALFSGNVQQLSLGELKQLELDGLPSIESAQQD---- 354

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
             L+ L++++G A+S   AR H+ +NAI +N   +S +   +    FD
Sbjct: 355 --LVELLIESGLASSKRIAREHISNNAISVNGEKMSADNPSLSFPLFD 400


>gi|269126394|ref|YP_003299764.1| tyrosyl-tRNA synthetase [Thermomonospora curvata DSM 43183]
 gi|268311352|gb|ACY97726.1| tyrosyl-tRNA synthetase [Thermomonospora curvata DSM 43183]
          Length = 425

 Score =  282 bits (721), Expect = 9e-74,   Method: Compositional matrix adjust.
 Identities = 157/416 (37%), Positives = 236/416 (56%), Gaps = 13/416 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +D L  L+ R  I Q ++  EL  L + G VT Y G+D TA SLH G+L Q++ L   Q 
Sbjct: 2   TDVLEDLAWRDLIAQSTDLDELRALLAAGPVTLYCGFDPTAPSLHLGNLIQILTLRRFQL 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+PI L+GG T +IGDPS +   R +   + +   +E+I+   + F+ +  G   ALM
Sbjct: 62  AGHRPIGLVGGATGLIGDPSGKSAERTLNSEEVVAAWVERIRAQVAKFLDF-EGPNAALM 120

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           ++N  W   +  I+ LR+IG  F VNRML+ E+V++RL+    +S+ EF+Y++LQA DF+
Sbjct: 121 VSNLEWTGPMTAIEFLRDIGKHFPVNRMLARETVKTRLE-TTGMSYTEFSYVLLQAMDFL 179

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG-A 244
           EL + Y CRLQ GGSDQWGN+  G+DL  R++     ALT+PLLT A GTK GKT  G  
Sbjct: 180 ELYRRYGCRLQTGGSDQWGNLTAGVDLIRRVEGGTAHALTTPLLTKADGTKFGKTAGGET 239

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKII 302
            WL+ E+TSPY F+Q+W N DD DV  + K  +  P  EI ++ K   +      A++ +
Sbjct: 240 YWLDPELTSPYAFYQFWINADDRDVEKYLKVFSFRPREEIQQLVKESAERPAARIAQRAL 299

Query: 303 ATEITTMVHGREEAEKAATAAMECFDM-SIHSQHMPTISISKDEVSRG-------MGLLT 354
           A E+TT+VHG +E  K   A+   F   ++      T+  +  EV R          ++ 
Sbjct: 300 AEEVTTLVHGADECAKVVAASRALFGQGALEELDERTLGAALAEVPRMEIPPGDLPPVVD 359

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
           L+  +G   S +EARR +      +NN+ +++E+     +D      + L  GK+N
Sbjct: 360 LLAGSGLCKSKSEARRTIAQGGAYLNNTKVTSEEAVPTTEDLLHGRFLVLRRGKRN 415


>gi|323258560|gb|EGA42227.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008283]
          Length = 388

 Score =  282 bits (721), Expect = 9e-74,   Method: Compositional matrix adjust.
 Identities = 157/390 (40%), Positives = 226/390 (57%), Gaps = 15/390 (3%)

Query: 39  YIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQE 98
           Y G+D TA SLH GHL  L+ L   Q+ GHKP++L+GG T +IGDPSF+   R++   + 
Sbjct: 1   YCGFDPTADSLHLGHLVPLLCLKRFQQAGHKPVALVGGATGLIGDPSFKAAERKLNTEET 60

Query: 99  IQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
           +QE + KI+   + F+ +  G+  A+  NN  W  S+  +  LR+IG  FSVN+M++ E+
Sbjct: 61  VQEWVAKIRKQVAPFLDFDCGENSAIAANNYDWFGSMNVLTFLRDIGKHFSVNQMINKEA 120

Query: 159 VRSRLKRE-QSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK 217
           V+ RL R+ Q +SF EF+Y +LQ YDF  L K +   LQ+GGSDQWGNI  GIDL  RL 
Sbjct: 121 VKQRLNRDDQGISFTEFSYNLLQGYDFACLNKLHGVALQIGGSDQWGNITSGIDLTRRLH 180

Query: 218 TPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT 277
             ++F LT PL+T A GTK GKT  GA+WL+ + TSPY F+Q+W N  DADV  F K  T
Sbjct: 181 QNQVFGLTVPLITKADGTKFGKTEGGAVWLDPKKTSPYKFYQFWINTADADVYRFLKFFT 240

Query: 278 TLPMSEIDRMA---KLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMEC-FDMSIHS 333
            + + EI+ +    K  GK    A+ ++A ++T +VHG EE   AA    EC F  S+ +
Sbjct: 241 FMDIEEINALEEEDKNSGK-APRAQYVLAEQVTRLVHG-EEGLVAAKRITECLFSGSLSA 298

Query: 334 ------QHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNE 387
                 + +    +   E+ +G  L+  +V A    S  +AR+ + SNA+ IN    S+ 
Sbjct: 299 LSEADFEQLAQDGVPMVEMEKGADLMQALVDAELQPSRGQARKTIASNAVTINGEKQSDP 358

Query: 388 KLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           +     +D        L  GKKN+  C +C
Sbjct: 359 EYIFNDEDRLFGRYTLLRRGKKNY--CLIC 386


>gi|317492097|ref|ZP_07950528.1| tyrosyl-tRNA synthetase [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316919980|gb|EFV41308.1| tyrosyl-tRNA synthetase [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 424

 Score =  281 bits (720), Expect = 9e-74,   Method: Compositional matrix adjust.
 Identities = 163/427 (38%), Positives = 235/427 (55%), Gaps = 23/427 (5%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG I Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q 
Sbjct: 4   SNLIKQLQERGLIAQVTDEEALAERLAQGPLALYCGFDPTADSLHLGHLVPLLCLKRFQL 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++     + E ++KI+   + F+ +  G+  A+ 
Sbjct: 64  EGHKPVALVGGATGLIGDPSFKATERKLNTQDTVHEWVDKIRHQVAPFLDFDCGENSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYDF 184
            NN  W  ++  +  LR+IG  FSVN+M++ E+V+ RL R+   +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDVGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L + +   LQ+GGSDQWGNI  GIDL  RL   +++ LT PL+T A GTK GKT  GA
Sbjct: 184 ASLNELHGVELQIGGSDQWGNITSGIDLTRRLHQKQVWGLTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + +ID +    K  GK    A+ +
Sbjct: 244 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMDLKDIDALEEEDKNSGK-APRAQYV 302

Query: 302 IATEITTMVHGREEAEKA----------ATAAMECFDMSIHSQH-MPTISISKDEVSRGM 350
           +A  +T MVHG E    A          A + M   D +  +Q  MP +     E+ R  
Sbjct: 303 LAELVTRMVHGEEGLAAAKRITQSLFSGALSEMTEADFAQLAQDGMPMV-----ELERDA 357

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            L   +V +    S  +AR+ + SNAI IN    S+ +      D        L  GKKN
Sbjct: 358 DLQQALVDSELQPSRGQARKTIASNAITINGEKQSDPEYTFSDADRLFGRFTLLRRGKKN 417

Query: 411 HIICHLC 417
           +  C +C
Sbjct: 418 Y--CLIC 422


>gi|325265775|ref|ZP_08132462.1| tyrosine--tRNA ligase [Kingella denitrificans ATCC 33394]
 gi|324982758|gb|EGC18383.1| tyrosine--tRNA ligase [Kingella denitrificans ATCC 33394]
          Length = 432

 Score =  281 bits (720), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 153/383 (39%), Positives = 225/383 (58%), Gaps = 12/383 (3%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L  RG I Q ++ +EL  L  Q  +T Y G+D TA SLH GHL  +++L   Q  G
Sbjct: 4   LLQDLQARGLIAQSTDIQELSQLLDQERITLYCGFDPTADSLHIGHLLPVLVLRRFQNAG 63

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H P++L+GG T +IGDPSF+   R +   + +   +E I+     F+K+  G+  A+M N
Sbjct: 64  HTPVALVGGATGMIGDPSFKAAERSLNTPETVAGWVESIRNQLKPFLKF-DGENPAIMEN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDFVE 186
           N  W  S+  +D LR+IG  FSVN ML+ ESV+ R++RE Q +SF EF+Y +LQ YDF E
Sbjct: 123 NANWFGSMNCLDFLRDIGKHFSVNAMLAKESVKQRIEREDQGISFTEFSYALLQGYDFAE 182

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L K ++ +L++GGSDQWGNI  G +   RL    +  +T PL+T + GTK GKT  GA+W
Sbjct: 183 LNKRHNVQLEIGGSDQWGNITWGTETTRRLNGKTVHGMTLPLVTKSDGTKFGKTEGGAVW 242

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKIIA 303
           L+ + TSPY F+Q+W  + DADV  F K  T L + +I ++    K  GK+  EA++I+A
Sbjct: 243 LDAKKTSPYQFYQFWLKVADADVYKFLKYFTFLSIEQIVQIEADDKASGKK-PEAQRILA 301

Query: 304 TEITTMVHGREEAEKAATAAMECF---DMSIHSQHMPTISISKDE---VSRGMGLLTLIV 357
            E+T ++HG    E A       F   + S+  Q    +++       VS    ++ ++V
Sbjct: 302 EEMTRLIHGEAALEAAQRITHSLFSGDESSLTEQDYAQLALDGLPCITVSGSPNVVEVLV 361

Query: 358 KAGFATSTNEARRHLKSNAIKIN 380
           KAG A S  EAR  ++S A+ +N
Sbjct: 362 KAGLAQSNKEARGFVQSGAVLLN 384


>gi|60593980|pdb|1X8X|A Chain A, Tyrosyl T-Rna Synthetase From E.Coli Complexed With
           Tyrosine
          Length = 322

 Score =  281 bits (720), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 139/318 (43%), Positives = 199/318 (62%), Gaps = 5/318 (1%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 4   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +QE ++KI+   + F+ +  G+  A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDCGENSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDF 184
            NN  W  ++  +  LR+IG  FSVN+M++ E+V+ RL RE Q +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNREDQGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K Y   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 184 ACLNKQYGVVLQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+ +    K  GK    A+ +
Sbjct: 244 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINALEEEDKNSGK-APRAQYV 302

Query: 302 IATEITTMVHGREEAEKA 319
           +A ++T +VHG E  + A
Sbjct: 303 LAEQVTRLVHGEEGLQAA 320


>gi|241895972|ref|ZP_04783268.1| tyrosine--tRNA ligase [Weissella paramesenteroides ATCC 33313]
 gi|241871015|gb|EER74766.1| tyrosine--tRNA ligase [Weissella paramesenteroides ATCC 33313]
          Length = 419

 Score =  281 bits (719), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 166/425 (39%), Positives = 236/425 (55%), Gaps = 27/425 (6%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +D L+ L+ RG I+Q+++   L  L SQ  +  Y+G D T  S+H GHL   M+L   Q 
Sbjct: 3   ADILNELAWRGAINQVTDEDGLRHLISQESIGLYVGIDPTGDSMHIGHLIPFMILKRFQL 62

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP+ ++GGGT  IGDPS +   R+++  +++  N+EKI+           G+ +  +
Sbjct: 63  VGHKPVIVVGGGTGSIGDPSGKKSERKLLSQEDVAANVEKIRAQMVKLF----GENEFTI 118

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  WL  +  + +LR+ G  FSVN ML+ + V SRL  E  +SF EF Y ILQA DF 
Sbjct: 119 VNNYDWLGKMSLLGMLRDYGKLFSVNTMLAKDVVASRL--EAGISFTEFTYQILQAIDFY 176

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERL---KTPKLFALTSPLLTTASGTKMGKTLS 242
           EL K    RLQ+GGSDQWGNI  G+DL  +L   + P  F LT PLL  A GTK GKT  
Sbjct: 177 ELYKREHVRLQIGGSDQWGNITNGVDLIHKLVDSEAPA-FGLTVPLLLKADGTKFGKTEG 235

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI-DRMAKL-QGKEINEAKK 300
           GA+WL+ E T+P+ F+Q+W N  DADV    K  T L   EI D +A+L +      A++
Sbjct: 236 GAVWLDPEKTTPFEFYQFWLNTADADVEKMLKYFTFLSQEEINDLVAELSENAAARHAQR 295

Query: 301 IIATEITTMVHGREE---AE--------KAATAAMECFDMSIHSQHMPTISISKDEVSRG 349
            +A E+TT VHG E    AE         A  A++   ++++ + ++PT  I  D++   
Sbjct: 296 RLAQEVTTFVHGEEAMHTAEVMTNVLFGNADVASLSTDEVAVLAGNVPTFEIENDKI--- 352

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
            GLL L+V AG   S   ARR +K  A++IN   I +E   I   D      + +  GKK
Sbjct: 353 -GLLDLVVAAGLEKSKTAARRSVKDGAVRINGVQIKDEDAIIDPTDKYDGKYVIVKRGKK 411

Query: 410 NHIIC 414
              + 
Sbjct: 412 KWAVA 416


>gi|77406343|ref|ZP_00783406.1| tyrosyl-tRNA synthetase [Streptococcus agalactiae H36B]
 gi|77175048|gb|EAO77854.1| tyrosyl-tRNA synthetase [Streptococcus agalactiae H36B]
          Length = 419

 Score =  281 bits (719), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 150/415 (36%), Positives = 231/415 (55%), Gaps = 13/415 (3%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L ERG + Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  GHKP 
Sbjct: 7   LKERGLVFQTTDEDALRKALEEGFVSYYTGYDPTADSLHLGHLVAILTSRRLQLAGHKPY 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+D  R +   + +     KI+G  S+F+++ TG   A+++NN  W
Sbjct: 67  ALVGGATGLIGDPSFKDVERSLQTKETVVSWGNKIRGQLSNFLEFETGDNKAVLVNNYDW 126

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
             +I +ID LR++G +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF EL KNY
Sbjct: 127 FSNISFIDFLRDVGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFYELNKNY 184

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
           +  LQ+GGSDQWGN+  G +L  R        +T PL+T ++G K GK+   A+WL+ + 
Sbjct: 185 NVTLQIGGSDQWGNMTAGTELIRRKSNGVSHVMTVPLITDSTGKKFGKSEGNAVWLDADK 244

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE---AKKIIATEITT 308
           TSPY  +Q+W N+ DAD V F K  T L + EI+ + ++Q +E      A+K +A E+ T
Sbjct: 245 TSPYEMYQFWLNVMDADAVRFLKIFTFLSLKEIEDI-RIQFEEAPHQRLAQKTLAREVVT 303

Query: 309 MVHGREEAEKAATAAMECFDMSIHS-------QHMPTISISKDEVSRGMGLLTLIVKAGF 361
           +VHG +  ++A     + F  +I         Q +  +     +    + ++ L+V +G 
Sbjct: 304 LVHGEKAYKEAVNITEQLFAGNIKGLSVKELKQGLRGVPNYHVQTEDNLNIIDLLVTSGV 363

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             S  +AR  + + AI IN   I + +  I   D        +  GKK + + + 
Sbjct: 364 VNSKRQAREDVSNGAIYINGDRIQDLEYTISXNDKLENEITVIRRGKKKYFVLNF 418


>gi|296102665|ref|YP_003612811.1| tyrosyl-tRNA synthetase [Enterobacter cloacae subsp. cloacae ATCC
           13047]
 gi|295057124|gb|ADF61862.1| tyrosyl-tRNA synthetase [Enterobacter cloacae subsp. cloacae ATCC
           13047]
          Length = 409

 Score =  281 bits (719), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 155/408 (37%), Positives = 227/408 (55%), Gaps = 13/408 (3%)

Query: 20  QISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTS 79
           Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q  GHKP++L+GG T 
Sbjct: 3   QVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQMAGHKPVALVGGATG 62

Query: 80  IIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYID 139
           +IGDPSF+   R++     +QE ++KI+   + F+ +  G   A+  NN  W  S+  + 
Sbjct: 63  LIGDPSFKAAERKLNTEDTVQEWVDKIRKQVAPFLDFNCGDNAAIAANNYDWFGSMNVLT 122

Query: 140 LLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDFVELAKNYDCRLQMG 198
            LR+IG  FSVN+M++ E+V+ RL R+ Q +SF EF+Y +LQ YDF  L K +   LQ+G
Sbjct: 123 FLRDIGKHFSVNQMINKEAVKQRLNRDDQGISFTEFSYNLLQGYDFACLNKLHGVCLQIG 182

Query: 199 GSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFW 258
           GSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA+WL+ + TSPY F+
Sbjct: 183 GSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGAVWLDPKKTSPYKFY 242

Query: 259 QYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKIIATEITTMVHGREE 315
           Q+W N  DADV  F K  T + +  I+ +    K  GK    A+ ++A E+T +VHG E 
Sbjct: 243 QFWINTADADVYRFLKFFTFMDIETINALEEEDKNSGK-APRAQYVLADEVTKLVHGEEG 301

Query: 316 AEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEAR 369
              A       F+ ++        + +    +   E+ +G  L+  +V +    S  +AR
Sbjct: 302 LAAAKRITASLFNGTLSDLSEADFEQLAQDGVPMVEMEKGADLMQALVDSELQPSRGQAR 361

Query: 370 RHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           + + SNAI IN    ++ +      D        L  GKKN+  C +C
Sbjct: 362 KTIASNAITINGEKQADPEYTFADSDRLYGRYTLLRRGKKNY--CLVC 407


>gi|296332055|ref|ZP_06874519.1| tyrosyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305675550|ref|YP_003867222.1| tyrosyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str.
           W23]
 gi|296150826|gb|EFG91711.1| tyrosyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305413794|gb|ADM38913.1| tyrosyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str.
           W23]
          Length = 422

 Score =  281 bits (719), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 154/400 (38%), Positives = 233/400 (58%), Gaps = 20/400 (5%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           ++ L  LS RG I Q+++   L+   ++  +  Y G+D TA SLH GHL  ++ L   Q 
Sbjct: 2   TNLLEDLSFRGLIQQMTDEEGLNKQLNEEKIRLYSGFDPTADSLHIGHLLPILTLRRFQL 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH PI+L+GG T +IGDPS +   R +  +  + E  +KIK   S F+ +   +  A++
Sbjct: 62  AGHHPIALVGGATGLIGDPSGKKAERTLNTADIVSEWSQKIKNQLSRFLDFDATENPAVI 121

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
            NN  W+  +  ID LR++G  F +N ML+ ++V SR+  E  +S+ EF+YMILQ+YDF+
Sbjct: 122 ANNFDWIGKMNVIDFLRDVGKNFGINYMLAKDTVSSRI--ESGISYTEFSYMILQSYDFL 179

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKLFALTSPLLTTASGTKMGKTLSG 243
            L ++ +C+LQ+GGSDQWGNI  G++L  + +    K F LT PL+T A GTK GKT  G
Sbjct: 180 NLYRDKNCKLQIGGSDQWGNITAGLELIRKSEEEGAKAFGLTIPLVTKADGTKFGKTEGG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKI 301
           AIWL+KE TSPY F+Q+W N DD DVV + K  T L   EI+  A+      E  EA+K 
Sbjct: 240 AIWLDKEKTSPYEFYQFWINTDDRDVVKYLKYFTFLSKEEIEAYAEKTETAPEKREAQKR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV-------SRGMGLLT 354
           +A E+T +VHGRE  E+A   +   F  +I       + +   +V       S+ + L+ 
Sbjct: 300 LAEEVTALVHGREALEQAINISQALFSGNIKELSAEDVKVGFKDVPSMEADSSQELSLVD 359

Query: 355 LIVKAGFATSTNEARRHLKSNAIKIN-------NSIISNE 387
           ++V++  + S  +AR  +++ A+ IN       N I+S E
Sbjct: 360 VLVQSKLSPSKRQAREDIQNGAVYINGERQTEINYILSGE 399


>gi|154493400|ref|ZP_02032720.1| hypothetical protein PARMER_02737 [Parabacteroides merdae ATCC
           43184]
 gi|154086610|gb|EDN85655.1| hypothetical protein PARMER_02737 [Parabacteroides merdae ATCC
           43184]
          Length = 430

 Score =  281 bits (718), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 154/427 (36%), Positives = 240/427 (56%), Gaps = 22/427 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L+ RG I  +    E  +   + + +AY+G D TA SLH GHL  +M+L  LQ+ 
Sbjct: 2   NFVEELTWRGMIADMMPGTEEQL--QKEMTSAYVGIDPTADSLHIGHLVSVMMLKHLQRA 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL-M 125
           GH+PI+L+GG T +IGDPS +   R ++    ++ N + IK   S F+ + +   +A  +
Sbjct: 60  GHRPIALVGGATGMIGDPSMKSAERNLLDEATLRHNQDSIKKQLSKFLDFDSDAPNAAKL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQS--LSFLEFNYMILQAYD 183
           +NN  W+    +++ +R+IG   +VN M++ ESV+ RL RE S  +SF EF+Y +LQ YD
Sbjct: 120 VNNYDWMKDYSFLNFIRDIGKHITVNYMMAKESVKKRLSRESSVGMSFTEFSYQLLQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           ++ L ++  CRLQMGG+DQWGNI  G +L  R    + FALT PL+T A G K GKT SG
Sbjct: 180 YMYLYEHEGCRLQMGGTDQWGNITTGTELIRRKLGGEAFALTCPLITKADGGKFGKTESG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKKI 301
            +WL++  TSPY F+Q+W N+ DAD   + K  T LP  EID + K Q     +   +K 
Sbjct: 240 NVWLDRRYTSPYKFYQFWLNVSDADAAKYIKIFTDLPKEEIDALIKEQEEAPHLRPLQKR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS--QHM------------PTISISKDEVS 347
           +A E+T MVH +E+ + A  A+   F  S     +H+            P   +S++E+S
Sbjct: 300 LAKEVTVMVHSQEDYDAAVEASNILFGNSTSEALKHLDEQTLLDVFNGVPQFEVSREELS 359

Query: 348 RGMGLLTLIV-KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+  + L   KA    S  E R+ ++S  I +N   ++++ + I          + +  
Sbjct: 360 AGVKAIDLFTEKAAIFPSKGEMRKLVQSGGISVNKEKLTDQDMVIDCSSLLDEKYLLVQR 419

Query: 407 GKKNHII 413
           GKKN+ +
Sbjct: 420 GKKNYYL 426


>gi|238021893|ref|ZP_04602319.1| hypothetical protein GCWU000324_01797 [Kingella oralis ATCC 51147]
 gi|237866507|gb|EEP67549.1| hypothetical protein GCWU000324_01797 [Kingella oralis ATCC 51147]
          Length = 434

 Score =  281 bits (718), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 153/389 (39%), Positives = 221/389 (56%), Gaps = 18/389 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L  RG I Q ++  EL  L     +  Y G+D TA SLH GHL  +++L   Q  G
Sbjct: 4   LLQDLQARGLIAQTTDINELSKLLDNEKIALYCGFDPTADSLHIGHLLPVLVLRRFQNAG 63

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H P++L+GG T +IGDPSF+   R +   + +   +E IK   + F+K+ + +  A+M N
Sbjct: 64  HTPVALVGGATGMIGDPSFKAVERSLNTPETVAGWVESIKNQLTPFLKFDS-ENPAIMEN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDFVE 186
           N  W  S+  +D LR+IG  FSVN ML+ ESV+ R++RE Q +SF EF+Y +LQ YDF +
Sbjct: 123 NANWFGSMNCLDFLRDIGKHFSVNAMLAKESVKQRIEREDQGISFTEFSYALLQGYDFAQ 182

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L   ++ +L++GGSDQWGNI  G +   RL    +  +T PL+T A GTK GKT  GA+W
Sbjct: 183 LNLRHNVQLEIGGSDQWGNITWGTETTRRLNHKTVHGMTLPLVTKADGTKFGKTEGGAVW 242

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKKIIAT 304
           LN   TSPY F+Q+W  + DADV  F K  T L + +ID +  A        EA++I+A 
Sbjct: 243 LNAAKTSPYQFYQFWLKVADADVYKFLKYFTFLTLEQIDAIEAADKASSAKPEAQRILAE 302

Query: 305 EITTMVHGREEAEKAATAAMECF---DMSIHSQH--------MPTISISKDEVSRGMGLL 353
           E+T ++HG    E A       F   + S+  Q         +P + +S    S  + ++
Sbjct: 303 EMTRLIHGEAALEAAQRITQSLFSGDESSLTEQDYAQLALDGLPALHVSH---SGSLNVV 359

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNS 382
             +V+AG A S  EAR  ++SNA+ IN S
Sbjct: 360 EALVQAGLAKSNKEARGFVQSNAVLINGS 388


>gi|284033307|ref|YP_003383238.1| tyrosyl-tRNA synthetase [Kribbella flavida DSM 17836]
 gi|283812600|gb|ADB34439.1| tyrosyl-tRNA synthetase [Kribbella flavida DSM 17836]
          Length = 433

 Score =  281 bits (718), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 157/420 (37%), Positives = 242/420 (57%), Gaps = 16/420 (3%)

Query: 3   AFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
           A ++  L  L+ RG I   ++P  L    ++G +T+Y+G+D TA SLH G+L QL+ L  
Sbjct: 7   ASRTQVLDDLASRGLIAHSTDPDALRAAMAEGPITSYVGFDPTAPSLHMGNLLQLLTLRR 66

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI-QENIEKIKGIFSSFIKYGTG-K 120
           LQ  GH PI L+GG T +IGDP  ++ S R++  +++ Q+ +E+++G    F+ +     
Sbjct: 67  LQLAGHNPIGLVGGATGLIGDP--KESSERVLNPKDVVQQWVERVRGQVERFLDFDEALP 124

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
             A M+NN  W   +  +D LR+IG  F VNRML  E V++RL  EQ +S+ EF+Y++LQ
Sbjct: 125 NPARMVNNYDWTKDLNTLDFLRDIGKHFPVNRMLGREVVKARL--EQGISYTEFSYVLLQ 182

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           + D++EL + Y C LQ GGSDQWGN+  G++L  R ++ K  AL +PL+T A GTK GKT
Sbjct: 183 SLDYLELYRRYGCTLQTGGSDQWGNLTAGVELIRRTESGKAHALATPLVTKADGTKFGKT 242

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEA 298
            SG +WL++E+TSPY F+Q+W N DD DV+   +  T     EI  + K         EA
Sbjct: 243 ESGTVWLDRELTSPYAFYQFWFNTDDRDVMQLVRYYTFRTAEEIAELEKATADRPHAREA 302

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMS-IHSQHMPTI-----SISKDEVSRGM-- 350
           ++++A ++TT+VHGR+E E+   AA   F  S +      T+          EV  G   
Sbjct: 303 QRVLAEDVTTLVHGRQETEQVQLAAKALFGQSDLRELDGDTLVAALREAPHTEVPGGQLP 362

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            +  L+V++G   S + ARR +      +NN  +S+ +     +D    G + L  GK++
Sbjct: 363 PVADLLVQSGLVASKSAARRTVAEGGAYLNNEKVSDAEYVPTSEDLLPGGALVLRRGKRS 422


>gi|171778939|ref|ZP_02920001.1| hypothetical protein STRINF_00862 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171282585|gb|EDT48009.1| hypothetical protein STRINF_00862 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 418

 Score =  280 bits (717), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 152/417 (36%), Positives = 230/417 (55%), Gaps = 21/417 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L ERG + Q ++   L    ++G V+ Y GYD TA SLH GHL  ++    LQ  GHKP 
Sbjct: 7   LKERGLVFQTTDEEALVKALTEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQMAGHKPY 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+D  R +   + +   + KI+   S F+ +  G   A+M+NN  W
Sbjct: 67  ALVGGATGLIGDPSFKDAERSLQTKETVDGWVVKIQNQLSRFLDFENGDNKAVMVNNYDW 126

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
             +I +ID LR++G +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF EL   Y
Sbjct: 127 FGNISFIDFLRDVGKYFTVNAMMSKESVKKRI--ETGISYTEFAYQIMQGYDFYELNDKY 184

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
           +  LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WL+ + 
Sbjct: 185 NVTLQIGGSDQWGNMTAGTELIRRKADKTGHVMTVPLITDATGKKFGKSEGNAVWLDADK 244

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATEITTM 309
           TSPY  +Q+W N+ D D V F K  T L + EI  + K      +E  A+K++A E+ T+
Sbjct: 245 TSPYEMYQFWLNVMDDDAVRFLKIFTFLSLDEIAEIEKEFNAARHERLAQKVLAREVVTL 304

Query: 310 VHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIVKA 359
           VHG E  ++A     + F  +I S           ++P  ++S D+      ++ ++V A
Sbjct: 305 VHGEEAYKEAIKITEQLFAGNIKSLSAKELKQGLNNVPNYAVSDDD---NRNIVEMLVAA 361

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN--IKLSFGKKNHIIC 414
             + S  +AR  +++ AI IN   + +  L   L D D   N    +  GKK + + 
Sbjct: 362 KISPSKRQAREDVQNGAIYINGERVQD--LDYTLSDDDKIDNELTVIRRGKKKYFVL 416


>gi|76786955|ref|YP_328889.1| tyrosyl-tRNA synthetase [Streptococcus agalactiae A909]
 gi|77410981|ref|ZP_00787337.1| tyrosyl-tRNA synthetase [Streptococcus agalactiae CJB111]
 gi|97202132|sp|Q3K3L4|SYY_STRA1 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|76562012|gb|ABA44596.1| tyrosyl-tRNA synthetase [Streptococcus agalactiae A909]
 gi|77163036|gb|EAO73991.1| tyrosyl-tRNA synthetase [Streptococcus agalactiae CJB111]
          Length = 419

 Score =  280 bits (717), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 150/415 (36%), Positives = 231/415 (55%), Gaps = 13/415 (3%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L ERG + Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  GHKP 
Sbjct: 7   LKERGLVFQTTDEDALRKALEEGFVSYYTGYDPTADSLHLGHLVAILTSRRLQLAGHKPY 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+D  R +   + +     KI+G  S+F+++ TG   A+++NN  W
Sbjct: 67  ALVGGATGLIGDPSFKDVERSLQTKETVVSWGNKIRGQLSNFLEFETGDNKAVLVNNYDW 126

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
             +I +ID LR++G +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF EL KNY
Sbjct: 127 FSNISFIDFLRDVGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFYELNKNY 184

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
           +  LQ+GGSDQWGN+  G +L  R        +T PL+T ++G K GK+   A+WL+ + 
Sbjct: 185 NVTLQIGGSDQWGNMTAGTELIRRKSNGVSHVMTVPLITDSTGKKFGKSEGNAVWLDADK 244

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE---AKKIIATEITT 308
           TSPY  +Q+W N+ DAD V F K  T L + EI+ + ++Q +E      A+K +A E+ T
Sbjct: 245 TSPYEMYQFWLNVMDADAVRFLKIFTFLSLKEIEDI-RIQFEEAPHQRLAQKTLAREVVT 303

Query: 309 MVHGREEAEKAATAAMECFDMSIHS-------QHMPTISISKDEVSRGMGLLTLIVKAGF 361
           +VHG +  ++A     + F  +I         Q +  +     +    + ++ L+V +G 
Sbjct: 304 LVHGEKAYKEAVNITEQLFAGNIKGLSVKELKQGLRGVPNYHVQTEDNLNIIDLLVTSGV 363

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             S  +AR  + + AI IN   I + +  I   D        +  GKK + + + 
Sbjct: 364 VNSKRQAREDVSNGAIYINGDRIQDLEYTISENDKLENEITVIRRGKKKYFVLNF 418


>gi|25010229|ref|NP_734624.1| tyrosyl-tRNA synthetase [Streptococcus agalactiae NEM316]
 gi|81457837|sp|Q8E7K0|SYY_STRA3 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|23094581|emb|CAD45799.1| tyrosyl-tRNA synthetase [Streptococcus agalactiae NEM316]
 gi|319744102|gb|EFV96477.1| tyrosine--tRNA ligase [Streptococcus agalactiae ATCC 13813]
          Length = 419

 Score =  280 bits (716), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 150/415 (36%), Positives = 231/415 (55%), Gaps = 13/415 (3%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L ERG + Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  GHKP 
Sbjct: 7   LKERGLVFQTTDEDALRKALEEGSVSYYTGYDPTADSLHLGHLVAILTSRRLQLAGHKPY 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+D  R +   + +     KI+G  S+F+++ TG   A+++NN  W
Sbjct: 67  ALVGGATGLIGDPSFKDVERSLQTKETVVSWGNKIRGQLSNFLEFETGDNKAVLVNNYDW 126

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
             +I +ID LR++G +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF EL KNY
Sbjct: 127 FSNISFIDFLRDVGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFYELNKNY 184

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
           +  LQ+GGSDQWGN+  G +L  R        +T PL+T ++G K GK+   A+WL+ + 
Sbjct: 185 NVTLQIGGSDQWGNMTAGTELIRRKSNGVSHVMTVPLITDSTGKKFGKSEGNAVWLDADK 244

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE---AKKIIATEITT 308
           TSPY  +Q+W N+ DAD V F K  T L + EI+ + ++Q +E      A+K +A E+ T
Sbjct: 245 TSPYEMYQFWLNVMDADAVRFLKIFTFLSLKEIEDI-RIQFEEAPHQRLAQKTLAREVVT 303

Query: 309 MVHGREEAEKAATAAMECFDMSIHS-------QHMPTISISKDEVSRGMGLLTLIVKAGF 361
           +VHG +  ++A     + F  +I         Q +  +     +    + ++ L+V +G 
Sbjct: 304 LVHGEKAYKEAVNITEQLFAGNIKGLSVKELKQGLRGVPNYHVQTEDNLNIIDLLVTSGV 363

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             S  +AR  + + AI IN   I + +  I   D        +  GKK + + + 
Sbjct: 364 VNSKRQAREDVSNGAIYINGDRIQDLEYTISENDKLENEITVIRRGKKKYFVLNF 418


>gi|152977028|ref|YP_001376545.1| tyrosyl-tRNA synthetase [Bacillus cereus subsp. cytotoxis NVH
           391-98]
 gi|152025780|gb|ABS23550.1| tyrosyl-tRNA synthetase [Bacillus cytotoxicus NVH 391-98]
          Length = 418

 Score =  280 bits (716), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 155/383 (40%), Positives = 223/383 (58%), Gaps = 11/383 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + L  L  RG I+Q ++   L+ L  +  V  Y G+D TA SLH GH+  +++L   Q  
Sbjct: 2   NILQDLEFRGLINQQTDAEGLEQLLEKESVKLYCGFDPTADSLHIGHMLPILMLRRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI+L+GGGT +IGDPS +   R +     +    E IK   S+F+++   +  A+M 
Sbjct: 62  GHQPIALVGGGTGMIGDPSGKKAERTLNTKDTVAYYTESIKKQLSNFLEFENVENPAVMA 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL ++  I  LR+IG  F +N ML+ ++V SRL  E  +SF EF+YMILQ+YDF+ 
Sbjct: 122 NNYDWLGNLDVITFLRDIGKNFGLNYMLAKDTVASRL--ETGISFTEFSYMILQSYDFLN 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERL-KTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           L KN+ CRLQ+GGSDQWGNI  G++L  +  +  K F LT PL+T + GTK GKT  GA+
Sbjct: 180 LYKNHGCRLQIGGSDQWGNITAGLELIRKSEEDAKAFGLTIPLVTKSDGTKFGKTEGGAV 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIA 303
           WL+ E T+PY F+Q+W N DD DVV + K  T L   EI  + K   +  E   A+K +A
Sbjct: 240 WLDPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLSHEEILDLEKQVAEAPEKRVAQKALA 299

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRGMGLLTLIV 357
           +E+T +VHG E  E+A   +   F  S+       I        S D  +   GL+ L+V
Sbjct: 300 SEMTKLVHGEEALEQAIKISAALFSGSVAELTADEIEQGFKDVPSVDRSAEDTGLIDLLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKIN 380
           ++  + S  +AR  + + AI IN
Sbjct: 360 ESKISPSKRQAREDVTNGAIYIN 382


>gi|22536342|ref|NP_687193.1| tyrosyl-tRNA synthetase [Streptococcus agalactiae 2603V/R]
 gi|76798581|ref|ZP_00780811.1| tyrosyl-tRNA synthetase [Streptococcus agalactiae 18RS21]
 gi|77409650|ref|ZP_00786321.1| tyrosyl-tRNA synthetase [Streptococcus agalactiae COH1]
 gi|81455406|sp|Q8E241|SYY_STRA5 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|22533167|gb|AAM99065.1|AE014199_1 tyrosyl-tRNA synthetase [Streptococcus agalactiae 2603V/R]
 gi|76586067|gb|EAO62595.1| tyrosyl-tRNA synthetase [Streptococcus agalactiae 18RS21]
 gi|77171736|gb|EAO74934.1| tyrosyl-tRNA synthetase [Streptococcus agalactiae COH1]
          Length = 419

 Score =  280 bits (716), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 150/415 (36%), Positives = 231/415 (55%), Gaps = 13/415 (3%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L ERG + Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  GHKP 
Sbjct: 7   LKERGLVFQTTDEDALRKALEEGSVSYYTGYDPTADSLHLGHLVAILTSRRLQLAGHKPY 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+D  R +   + +     KI+G  S+F+++ TG   A+++NN  W
Sbjct: 67  ALVGGATGLIGDPSFKDVERSLQTKKTVVSWGNKIRGQLSNFLEFETGDNKAVLVNNYDW 126

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
             +I +ID LR++G +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF EL KNY
Sbjct: 127 FSNISFIDFLRDVGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFYELNKNY 184

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
           +  LQ+GGSDQWGN+  G +L  R        +T PL+T ++G K GK+   A+WL+ + 
Sbjct: 185 NVTLQIGGSDQWGNMTAGTELIRRKSNGVSHVMTVPLITDSTGKKFGKSEGNAVWLDADK 244

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE---AKKIIATEITT 308
           TSPY  +Q+W N+ DAD V F K  T L + EI+ + ++Q +E      A+K +A E+ T
Sbjct: 245 TSPYEMYQFWLNVMDADAVRFLKIFTFLSLKEIEDI-RIQFEEAPHQRLAQKTLAREVVT 303

Query: 309 MVHGREEAEKAATAAMECFDMSIHS-------QHMPTISISKDEVSRGMGLLTLIVKAGF 361
           +VHG +  ++A     + F  +I         Q +  +     +    + ++ L+V +G 
Sbjct: 304 LVHGEKAYKEAVNITEQLFAGNIKGLSVKELKQGLRGVPNYHVQTEDNLNIIDLLVTSGV 363

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             S  +AR  + + AI IN   I + +  I   D        +  GKK + + + 
Sbjct: 364 VNSKRQAREDVSNGAIYINGDRIQDLEYTISENDKLENEITVIRRGKKKYFVLNF 418


>gi|297182181|gb|ADI18352.1| tyrosyl-tRNA synthetase [uncultured actinobacterium HF4000_04C13]
          Length = 439

 Score =  280 bits (716), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 147/422 (34%), Positives = 226/422 (53%), Gaps = 15/422 (3%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L  RG +   ++   +    + G +T Y G+D TA SLH GHL  L+LL   Q  G
Sbjct: 16  ILDDLVARGLVQDSTDLEAIRERMADGPITLYCGFDPTADSLHVGHLVPLLLLRRFQDAG 75

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG----TGKTDA 123
           H+PI+L GG T ++GDPS R E R ++  + +  N+E +     SF+++      G   A
Sbjct: 76  HRPIALAGGATGMVGDPSGRSEERNLLDGETLTHNVEAVAVQLRSFLRFDGHLREGDQPA 135

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           ++++N  W   +  ++ LR++G   +V  ML  ES+R+RL  +Q +SF EF+YM+LQA D
Sbjct: 136 VLVDNREWTEGVGVLEFLRDVGKHVTVGTMLGKESIRARLAGDQGISFTEFSYMLLQAND 195

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F EL     C LQ+GGSDQWGNI  GID+  R +      LT PL+T A G K GKT  G
Sbjct: 196 FYELHDRLGCELQVGGSDQWGNITAGIDMIRRRRAVPAHGLTVPLMTRADGAKFGKTADG 255

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINEAKKI 301
           A+WL+   T PY   QY+ N+DD DV  F   LT LP++E+  +    G+  E   A+K 
Sbjct: 256 AVWLDAARTLPYELHQYFVNVDDRDVERFLLHLTLLPVAEVASIMADHGRAPESRVAQKR 315

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQH--------MPTISISKDEVSRGMGLL 353
           +A E+  +VHG+ E E+A  AA   F +   +          +P  S++  +++    L+
Sbjct: 316 LADEVCMLVHGQPETERARLAAEGLFGVDPPTGEVLEALRGIVPETSVTAGDLAGEESLV 375

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN-HI 412
            ++V AG   S  +ARR L    + +N     ++ + +          + L  G++N H+
Sbjct: 376 DVLVAAGLCGSRGDARRTLAGGGVSVNGVRQDSDAMALPADALVDGRFVLLQKGRRNRHL 435

Query: 413 IC 414
           + 
Sbjct: 436 LV 437


>gi|320547858|ref|ZP_08042142.1| tyrosine--tRNA ligase [Streptococcus equinus ATCC 9812]
 gi|320447618|gb|EFW88377.1| tyrosine--tRNA ligase [Streptococcus equinus ATCC 9812]
          Length = 418

 Score =  280 bits (716), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 153/417 (36%), Positives = 230/417 (55%), Gaps = 21/417 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L ERG + Q ++   L    ++G V+ Y GYD TA SLH GHL  ++    LQ  GHKP 
Sbjct: 7   LKERGLVFQTTDEEALVKALTEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAGHKPY 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+D  R +   + +   + KI+   S F+ +  G   A+M+NN  W
Sbjct: 67  ALVGGATGLIGDPSFKDAERSLQTKETVDGWVVKIQNQLSRFLDFENGDNKAVMVNNYDW 126

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
             +I +ID LR++G +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF EL   Y
Sbjct: 127 FGNISFIDFLRDVGKYFTVNAMMSKESVKKRI--ETGISYTEFAYQIMQGYDFYELNDKY 184

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
           +  LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WL+ + 
Sbjct: 185 NVTLQIGGSDQWGNMTAGTELLRRKADKTGHVMTVPLITDATGKKFGKSEGNAVWLDADK 244

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATEITTM 309
           TSPY  +Q+W N+ D D V F K  T L + EI  + K      +E  A+KI+A E+ T+
Sbjct: 245 TSPYEMYQFWLNVMDDDAVRFLKIFTFLSLDEIAEIEKEFNAARHERLAQKILAREVVTL 304

Query: 310 VHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIVKA 359
           VHG E  ++A     + F  +I S           ++P  ++ +D+      ++ ++V A
Sbjct: 305 VHGEEAYKEALKITEQLFAGNIKSLSAKELKQGLNNVPNYAVQEDD---NRNIVEMLVAA 361

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN--IKLSFGKKNHIIC 414
             + S  +AR  +++ AI IN   I +  L   L D D   N    +  GKK + + 
Sbjct: 362 KISPSKRQAREDVQNGAIYINGERIQD--LDYTLSDDDKIDNELTVIRRGKKKYFVL 416


>gi|91224114|ref|ZP_01259377.1| tyrosyl-tRNA synthetase [Vibrio alginolyticus 12G01]
 gi|91191025|gb|EAS77291.1| tyrosyl-tRNA synthetase [Vibrio alginolyticus 12G01]
          Length = 419

 Score =  280 bits (715), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 153/408 (37%), Positives = 227/408 (55%), Gaps = 26/408 (6%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +  L  L +RG I Q S+  E+  L SQ   T Y G+D TA SLH GHL  L++L   Q 
Sbjct: 3   TPLLQDLQDRGLIAQASDLEEIQTLLSQ-PQTVYCGFDPTAGSLHIGHLVPLIMLKRFQD 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+ ++L+GG T +IGDPSF+   R +   + +   +  +       +     K   +M
Sbjct: 62  AGHQAVALIGGATGMIGDPSFKATERSLNSEEIVSGWVNDLSNQIQQLMNLQLTKP-MIM 120

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDF 184
           +NN  W+ +I  ID  R++G  FS+N M++ +SV+ RL+R +Q +SF EF+Y +LQ+YDF
Sbjct: 121 VNNADWMKAINVIDFFRDVGKHFSINTMVNRDSVKQRLQRPDQGISFTEFSYALLQSYDF 180

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
            EL + Y CRLQ+GG+DQWGNI+ GIDL  R    ++F LT PL+T + GTK GKT  GA
Sbjct: 181 AELNRRYGCRLQIGGNDQWGNIVSGIDLTRRQNGEQVFGLTLPLITKSDGTKFGKTEGGA 240

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL----QGKEINEAKK 300
           +WL+   TSPY F+Q+W   +DADV  F +  T L   EI  +       QGK   +A++
Sbjct: 241 VWLDPSKTSPYAFYQFWLGAEDADVYHFLRYYTFLSCEEIASIEAQDQTSQGKP--QAQR 298

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHS-----------QHMPTISISKDEVSRG 349
           I+A E+T  VHG E    A       F  ++               +P+I  ++ +    
Sbjct: 299 ILAEEMTRFVHGEEGLASAERITQALFSGNVQQLSLGELKQLELDGLPSIESAQQD---- 354

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
             L+ L+V++G A+S   AR H+ +NAI +N   +S +   +    FD
Sbjct: 355 --LVELLVESGLASSKRVAREHISNNAISVNGEKVSADNPSLSFPLFD 400


>gi|60593714|pdb|1VBM|A Chain A, Crystal Structure Of The Escherichia Coli Tyrosyl-Trna
           Synthetase Complexed With Tyr-Ams
 gi|60593715|pdb|1VBM|B Chain B, Crystal Structure Of The Escherichia Coli Tyrosyl-Trna
           Synthetase Complexed With Tyr-Ams
          Length = 318

 Score =  280 bits (715), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 138/312 (44%), Positives = 196/312 (62%), Gaps = 5/312 (1%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+ GHKP+
Sbjct: 6   LQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQAGHKPV 65

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+   R++   + +QE ++KI+   + F+ +  G+  A+  NN  W
Sbjct: 66  ALVGGATGLIGDPSFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDCGENSAIAANNYDW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDFVELAKN 190
             ++  +  LR+IG  FSVN+M++ E+V+ RL RE Q +SF EF+Y +LQ YDF  L K 
Sbjct: 126 FGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNREDQGISFTEFSYNLLQGYDFACLNKQ 185

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKE 250
           Y   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA+WL+ +
Sbjct: 186 YGVVLQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGAVWLDPK 245

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKIIATEIT 307
            TSPY F+Q+W N  DADV  F K  T + + EI+ +    K  GK    A+ ++A ++T
Sbjct: 246 KTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINALEEEDKNSGK-APRAQYVLAEQVT 304

Query: 308 TMVHGREEAEKA 319
            +VHG E  + A
Sbjct: 305 RLVHGEEGLQAA 316


>gi|88704554|ref|ZP_01102267.1| tyrosyl-tRNA synthetase [Congregibacter litoralis KT71]
 gi|88700875|gb|EAQ97981.1| tyrosyl-tRNA synthetase [Congregibacter litoralis KT71]
          Length = 448

 Score =  280 bits (715), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 154/396 (38%), Positives = 233/396 (58%), Gaps = 20/396 (5%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S  L  L +R  I QI+    L      G  + Y G+D TA SLH G L  L++L   Q 
Sbjct: 20  SALLRELQQRELIFQIAGEDNLPGWLDGGTRSLYCGFDPTADSLHIGSLVPLLMLRRFQL 79

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+PI+L+GG T +IGDPSF+ + R++     ++  +EK+    S F+ +  G   A++
Sbjct: 80  AGHRPIALVGGATGLIGDPSFKAQERQLNTPDIVEAWVEKLSQQVSRFVDFDAGPQSAVV 139

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQS-LSFLEFNYMILQAYDF 184
           +NN  W  ++  +  LR++G  FS+N M+  ESV+ R++RE S +SF EF YMILQ+YDF
Sbjct: 140 VNNLQWTRNLDVLTFLRDVGKHFSINAMIQKESVKQRIEREGSGISFTEFAYMILQSYDF 199

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
            EL + YDC LQ+GGSDQWGNI  GIDL  RL   +++ LT PL+T + G+K GKT SG 
Sbjct: 200 AELYQRYDCGLQLGGSDQWGNITGGIDLTRRLHGGQVYGLTMPLITKSDGSKFGKTESGT 259

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLP---MSEIDRM-AKLQGKEINEAKK 300
           IWL+   TSPY+F+Q+W ++ D DV  F +  T LP   ++EI+R  A+  G+   EA++
Sbjct: 260 IWLDAARTSPYSFYQFWLSVADDDVYRFLRYFTFLPVIDIAEIERSDAQRSGRP--EAQR 317

Query: 301 IIATEITTMVHGRE--EAEKAATAAMECFDMSIHSQH---------MPTISISKDEVSRG 349
           I+A E+T +VHG E   A K  T ++   ++   S+          +P+  I + E+   
Sbjct: 318 ILAEEVTRLVHGEEGVAAAKRITESLFSGELGGLSEQDLEQLMLDGLPSSVIKEGELPE- 376

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIIS 385
             L  L+ +AG A S  + +  L+ +A+ +N   ++
Sbjct: 377 -TLTQLLTEAGLAASGKQIKDALQRSAVIVNGQSLA 411


>gi|300722839|ref|YP_003712132.1| tyrosine tRNA synthetase [Xenorhabdus nematophila ATCC 19061]
 gi|297629349|emb|CBJ89948.1| tyrosine tRNA synthetase [Xenorhabdus nematophila ATCC 19061]
          Length = 427

 Score =  280 bits (715), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 153/390 (39%), Positives = 220/390 (56%), Gaps = 22/390 (5%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           ++ +  L ERG + Q+++   L    +QG V+ Y G+D TA SLH GHL  L+ L   Q 
Sbjct: 8   NNLIKQLQERGLVAQVTDEEALAERLTQGPVSLYCGFDPTADSLHLGHLVPLLCLKRFQL 67

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKPI+L+GG T +IGDPSF+   R++   + ++E + KI+   S F+ +  G+  A +
Sbjct: 68  AGHKPIALVGGATGLIGDPSFKATERKLNTEETVKEWVAKIRKQVSPFLSF-DGENGAEL 126

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYDF 184
            NN  W   +  +  LR+IG  FSVN+M++ E+V+ RL R+   +S+ EF+Y +LQ+YDF
Sbjct: 127 ANNYDWFGEMDVLAFLRDIGKHFSVNQMINKEAVKQRLNRDDVGISYTEFSYNLLQSYDF 186

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L   Y   LQ+GGSDQWGNI  GIDL  RL   ++F +T PL+T + GTK GKT  GA
Sbjct: 187 ANLNGKYGVELQIGGSDQWGNITSGIDLTRRLHQKQVFGMTVPLITKSDGTKFGKTEGGA 246

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+ +    K  GK    A+ +
Sbjct: 247 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMDIEEINVLEEEDKNSGK-APRAQYV 305

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS-----------QHMPTISISKDEVSRGM 350
           +A ++T +VHG E    A       F  +I               MP I + KD      
Sbjct: 306 LAEQVTGLVHGEEGLAAAKRITESLFSGAIADLTEDDFAQLAQDGMPAIELEKD-----A 360

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKIN 380
            L   +V A F  S  +AR  + SNA+ IN
Sbjct: 361 DLQQALVIAEFVPSRGQARTMISSNAVSIN 390


>gi|82543995|ref|YP_407942.1| tyrosyl-tRNA synthetase [Shigella boydii Sb227]
 gi|97201953|sp|Q320Z4|SYY_SHIBS RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|81245406|gb|ABB66114.1| tyrosine tRNA synthetase [Shigella boydii Sb227]
          Length = 424

 Score =  279 bits (714), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 159/423 (37%), Positives = 239/423 (56%), Gaps = 15/423 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 4   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +QE ++KI+   + F+ +  G+  A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDCGENSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDF 184
            NN  W  ++  +  LR+IG  FSVN+M++ E+V+ RL RE + +S  EF+Y + Q YD+
Sbjct: 124 ANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNREDEGMSITEFSYNLQQGYDW 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L  +Y   LQ+GGSDQ  NI   IDL  RL    +  LT PL+T A GTK GKT  GA
Sbjct: 184 TCLNTHYYVELQIGGSDQRWNITSEIDLTRRLHQNHVLGLTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+ +    K  GK    A+ +
Sbjct: 244 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINALEEEDKNSGK-APRAQYV 302

Query: 302 IATEITTMVHGREEAEKAATAAMEC-FDMSIHS------QHMPTISISKDEVSRGMGLLT 354
           +A ++T +VHG EE  +AA    EC F  S+ +      + +    +   E+ +G  L+ 
Sbjct: 303 LAEQVTRLVHG-EEGLQAAKRITECLFSGSLSALSEADFEQLAQDGVPMVEMEKGADLMQ 361

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +V +    S  +AR+ + SNAI IN    S+ +   K +D        L  GKKN+  C
Sbjct: 362 ALVDSELQPSRGQARKTIASNAITINGEKQSDPEYFFKEEDRLFGRFTLLRRGKKNY--C 419

Query: 415 HLC 417
            +C
Sbjct: 420 LIC 422


>gi|150024271|ref|YP_001295097.1| tyrosine--tRNA ligase [Flavobacterium psychrophilum JIP02/86]
 gi|259516999|sp|A6GW04|SYY_FLAPJ RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|149770812|emb|CAL42277.1| Tyrosine--tRNA ligase [Flavobacterium psychrophilum JIP02/86]
          Length = 431

 Score =  279 bits (714), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 155/423 (36%), Positives = 241/423 (56%), Gaps = 24/423 (5%)

Query: 15  RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLM 74
           RG  H +    E  +  ++   TAYIG+D TA SLH G + Q++LL  L+  GHKPI+L+
Sbjct: 11  RGLFHDMMPGTEEQL--TKESTTAYIGFDPTADSLHIGSMVQIILLVHLKNFGHKPIALI 68

Query: 75  GGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA-LMLNNETWLC 133
           GG T +IGDPS + + R ++    + +N+  IK + SSF+ + T   +A +++NN  W+ 
Sbjct: 69  GGATGMIGDPSGKSDERNLLDEATLNKNVAGIKAVLSSFLDFNTTNANAPILVNNYDWMK 128

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDFVELAKNYD 192
              +ID  R+IG   +VN M+S +SV+ RL  E + +SF EF Y ++Q YDF  L KN++
Sbjct: 129 DFSFIDFARDIGKRITVNYMMSKDSVKKRLGAEGEGMSFTEFTYQLIQGYDFQYLYKNHN 188

Query: 193 CRLQMGGSDQWGNIICGIDLGERL--KTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKE 250
           C LQMGGSDQWGNI  G +L  R+  +  K +ALT+PL+T A G+K GK+  G +WL  +
Sbjct: 189 CLLQMGGSDQWGNITTGTELVRRMGGEGAKAYALTTPLITKADGSKFGKSEGGNVWLTAD 248

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKKIIATEITT 308
            TS Y F+Q+W N  D D   + K  T L  + ID + +       +   ++ +  EIT 
Sbjct: 249 KTSVYKFYQFWLNTSDDDAEKYIKIFTFLDKNTIDGLIEEHKTAPHLRVLQRKLTEEITI 308

Query: 309 MVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDEVSRGMGLLT 354
           +VHG+EE EKA  A+   F  S  +                +P   ISK ++  G+ ++ 
Sbjct: 309 LVHGKEELEKAIKASNILFGNSTSNDLKGLDAATFLEIFDGVPQAEISKTDIEAGINIVE 368

Query: 355 LI-VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
           ++  K+GF  S  EARR L +N+I +N   ++ E+  +  +D  +   + L  GKKN+ +
Sbjct: 369 VLNEKSGFLKSNGEARRALSANSIAVNKEKVT-EEFTLTTKDMINNQFVLLQSGKKNYFV 427

Query: 414 CHL 416
            ++
Sbjct: 428 LNV 430


>gi|254517420|ref|ZP_05129477.1| tyrosyl-tRNA synthetase [gamma proteobacterium NOR5-3]
 gi|219674258|gb|EED30627.1| tyrosyl-tRNA synthetase [gamma proteobacterium NOR5-3]
          Length = 434

 Score =  279 bits (714), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 152/396 (38%), Positives = 228/396 (57%), Gaps = 22/396 (5%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S  L+ L +R    QI+   +L    + G  + Y G+D TA SLH G L  L++L   Q 
Sbjct: 6   SALLAELQQRELTFQIAGEDKLPEWLNGGSRSLYCGFDPTADSLHIGSLVPLLMLRRFQL 65

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+PI+L+GG T +IGDPSF+ + R++   + ++  +EK++G  S F+ +  G   A++
Sbjct: 66  AGHRPIALVGGATGLIGDPSFKAQERQLNTPEVVESWVEKLRGQVSRFVDFDAGAQSAVV 125

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQS-LSFLEFNYMILQAYDF 184
           +NN  W   +  +  LR+IG  FS+N M+  ESV+ R++RE S +SF EF YMILQ+YDF
Sbjct: 126 VNNLEWTRDLDVLTFLRDIGKHFSINTMIQKESVKQRIEREGSGISFTEFTYMILQSYDF 185

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
            EL K YDC LQ+GGSDQWGNI  GIDL  R+   +++ LT PL+T + G+K GKT SG 
Sbjct: 186 AELYKRYDCGLQLGGSDQWGNITGGIDLTRRMHGGQVYGLTMPLITKSDGSKFGKTESGT 245

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN--EAKKII 302
           IWL+   TSPY+F+Q+W ++ D+D   F +  T L +++I  + +   +     EA++I+
Sbjct: 246 IWLDAARTSPYSFYQFWLSVADSDAYRFLRYFTFLEVADIAEIERADAERSGRPEAQRIL 305

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDE------------VSRGM 350
           A E+T +VHG      A  AA +    S+ S     +S    E              RG+
Sbjct: 306 AEEVTRLVHG-----DAGLAAAKRITESLFSGEPEGLSEPDLEQLMLDGLPSSLLPDRGL 360

Query: 351 G--LLTLIVKAGFATSTNEARRHLKSNAIKINNSII 384
              L  L+  AG A S  + +  L+ +A+ IN S +
Sbjct: 361 PETLTQLLADAGLAASGKQIKDALQRDAVIINGSAL 396


>gi|145300655|ref|YP_001143496.1| tyrosyl-tRNA synthetase [Aeromonas salmonicida subsp. salmonicida
           A449]
 gi|142853427|gb|ABO91748.1| tyrosyl-tRNA synthetase [Aeromonas salmonicida subsp. salmonicida
           A449]
          Length = 433

 Score =  279 bits (714), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 163/439 (37%), Positives = 245/439 (55%), Gaps = 38/439 (8%)

Query: 2   PAFKSDFLSILSERGFIHQISNPREL-DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           P      L  LS+RG + Q S+P  L D L +    T Y G+D TA SLH GHL  L++L
Sbjct: 11  PMINPHLLDELSQRGLVAQNSDPAALADHLATS--RTVYCGFDPTAGSLHIGHLVPLLML 68

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GH P++L+GG T +IGDPSF+   R +  +  +   +  +     + +    G 
Sbjct: 69  RRFQLAGHTPVALVGGATGLIGDPSFKATERSLNSADTVLGWVASLSAQIRALLPADDGL 128

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMIL 179
           +   ++NN  W+  +  +D LR+IG  FSVN ML+ ESVR RL R +Q +SF EF+Y +L
Sbjct: 129 SAPQLVNNGDWMGQMSALDFLRDIGKHFSVNAMLARESVRQRLARPDQGISFTEFSYALL 188

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK 239
           Q+YDF  L +   C LQ+GG+DQWGNI  G+DL  RL   ++  +T PL+T A GTK GK
Sbjct: 189 QSYDFAVLHQRLGCTLQIGGNDQWGNITSGMDLTRRLHQAQVHGMTLPLITKADGTKFGK 248

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM----AKLQGKEI 295
           T  GA+WL+  +TSPY F+Q+W    D DV  F +  + + +SEID +    A+ QG++ 
Sbjct: 249 TEGGAVWLDPALTSPYAFYQFWLGTADEDVYRFLRYYSFMSLSEIDALEEEDAQRQGRK- 307

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECF---------------DMSIHSQH-MPTI 339
            +A++++A E+T +VHG     KAA AA++                 D++  +Q  MP+ 
Sbjct: 308 -QAQQVLANELTELVHG-----KAALAAVQRISELLFSGDVVRLGESDLAQLAQDGMPSS 361

Query: 340 SISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDST 399
           ++S +       L++L+V  G A S   AR  L + AI +N +I  +E+L  + + FD  
Sbjct: 362 TVSGE-----TDLVSLLVSCGLANSKRIARELLAAGAISLNGTIRQDEQLSAEERLFDRY 416

Query: 400 GNIKLSFGKKNHIICHLCG 418
             + L  GKK + +    G
Sbjct: 417 --LLLRRGKKQYQLVAWLG 433


>gi|295399545|ref|ZP_06809527.1| tyrosyl-tRNA synthetase [Geobacillus thermoglucosidasius C56-YS93]
 gi|294979011|gb|EFG54607.1| tyrosyl-tRNA synthetase [Geobacillus thermoglucosidasius C56-YS93]
          Length = 419

 Score =  279 bits (714), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 152/387 (39%), Positives = 223/387 (57%), Gaps = 19/387 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D L  L  RG I+Q+++   L  L ++  VT Y G+D TA SLH GHL  ++ L   Q  
Sbjct: 2   DLLQELEWRGLINQVTDKEGLQKLLNEEKVTLYSGFDPTADSLHIGHLLPILTLRRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI+L+GG T +IGDPS +   R +   + +Q+   +IK   + F+ +   +  A + 
Sbjct: 62  GHRPIALVGGATGLIGDPSGKKSERTLNPKETVQQWSNRIKEQLARFLDFDAEENPAKIA 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W+ S+  I  LR++G  F +N ML+ ESV+SR+  E  +SF EF+YMILQ+ DF++
Sbjct: 122 NNYDWIGSLDVISFLRDVGKHFGINYMLAKESVQSRI--ETGISFTEFSYMILQSLDFLK 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASGTKMGKTLSGAI 245
           L +   CRLQ+GGSDQWGNI  G++L  + +   K F LT PL+T A GTK GKT  GA+
Sbjct: 180 LYQTEQCRLQIGGSDQWGNITAGLELIRKTEGDAKAFGLTVPLVTKADGTKFGKTEGGAV 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIA 303
           WL+KE TSPY F+Q+W N DD DV+ + K  T L   EI+ + K   +  E   A+K +A
Sbjct: 240 WLDKEKTSPYEFYQFWINTDDRDVIKYLKYFTFLSKEEIEELEKQLQKAPEQRAAQKALA 299

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLL 353
            E+T +VHG +  ++A   +   F  S+            + +P+     +EV     L+
Sbjct: 300 EEMTKLVHGEDALKQAVRISEALFSGSVSQLTAEEIEQGFKDVPSFEYEGEEVP----LV 355

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKIN 380
            L+V A    S  +AR  + + AI IN
Sbjct: 356 ELLVMAKIVPSKRQAREDIANGAIYIN 382


>gi|154687107|ref|YP_001422268.1| tyrosyl-tRNA synthetase [Bacillus amyloliquefaciens FZB42]
 gi|189083641|sp|A7Z7R1|SYY_BACA2 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|154352958|gb|ABS75037.1| TyrS [Bacillus amyloliquefaciens FZB42]
          Length = 421

 Score =  279 bits (714), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 153/389 (39%), Positives = 229/389 (58%), Gaps = 19/389 (4%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           ++ L  LS RG I Q+++   L+   ++  +  Y G+D TA SLH GHL  ++ L   Q 
Sbjct: 2   TNLLEDLSFRGLIQQMTDEEGLNKQLNEEKIRLYSGFDPTADSLHIGHLLPILTLRRFQL 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH PI+L+GG T +IGDPS +   R +     + E  +KIK   S F+ +  G+  A++
Sbjct: 62  AGHHPIALVGGATGLIGDPSGKKAERTLNTQDIVVEWSQKIKNQLSRFLDFEAGENPAVI 121

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
            NN  W+  +  I+ LR++G  F +N ML+ ++V SR+  E  +S+ EF+YMILQ+YDF+
Sbjct: 122 ANNFDWIGKLSIIEFLRDVGKNFGINYMLAKDTVSSRI--ETGISYTEFSYMILQSYDFL 179

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKLFALTSPLLTTASGTKMGKTLSG 243
            L +  +C+LQ+GGSDQWGNI  G++L  + +    K F LT PL+T A GTK GKT  G
Sbjct: 180 NLYREKNCKLQIGGSDQWGNITAGLELIRKSEEEGAKAFGLTIPLVTKADGTKFGKTEGG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKI 301
           AIWL+KE TSPY F+Q+W N DD DVV + K  T L   EI+  A+      E  EA+K 
Sbjct: 240 AIWLDKEKTSPYEFYQFWINTDDRDVVKYLKYFTFLSKEEIEAYAEKTETAPEKREAQKR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECF----------DMSIHSQHMPTISISKDEVSRGMG 351
           +A E+T +VHGRE  E+A   +   F          D+ +  + +P  S  KD  S  + 
Sbjct: 300 LAEEVTVLVHGREALEQAVHISQALFSGNIKELSAQDVKVGFKDVP--SFEKDR-SEELS 356

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKIN 380
           L+ ++V++  + S  +AR  +++ A+ IN
Sbjct: 357 LVDVLVESKLSPSKRQAREDIQNGAVYIN 385


>gi|209694434|ref|YP_002262362.1| tyrosyl-tRNA synthetase [Aliivibrio salmonicida LFI1238]
 gi|254783564|sp|B6EHW3|SYY_ALISL RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|208008385|emb|CAQ78540.1| tyrosyl-tRNA synthetase [Aliivibrio salmonicida LFI1238]
          Length = 426

 Score =  279 bits (714), Expect = 6e-73,   Method: Compositional matrix adjust.
 Identities = 153/406 (37%), Positives = 232/406 (57%), Gaps = 22/406 (5%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           ++ L  L  RG I Q +   EL    S    T Y G+D TA SLH G L  L++L   Q+
Sbjct: 5   NELLQDLKARGLIAQCTADEELAEHLSTDCRTLYCGFDPTADSLHIGSLVPLLVLKRFQQ 64

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++  S  + + + KI+   S+F+ +   K  A +
Sbjct: 65  AGHKPLALVGGATGLIGDPSFKAAERQLNTSDVVGDWVNKIRAQVSAFVDFNESKNGAEV 124

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQS-LSFLEFNYMILQAYDF 184
           +NN  W+  I  I+ +R+IG  FSVN M+  ESV+ R+ RE S +SF EF+YM+LQ+YDF
Sbjct: 125 VNNLDWIGEINVIEFMRDIGKHFSVNSMIQKESVKQRIDREGSGISFTEFSYMLLQSYDF 184

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K  +C LQ+GGSDQWGNI  GIDL  R+   K+F LT PL+T + GTK GKT SG 
Sbjct: 185 AALNKAKECTLQIGGSDQWGNITGGIDLTRRMNRNKVFGLTLPLVTKSDGTKFGKTESGT 244

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK----LQGKEINEAKK 300
           IWL+   TSPY F+Q+W    DADV  F +  T L + EI    +    +QG+   +   
Sbjct: 245 IWLDPSKTSPYAFFQFWLGTADADVYDFLRFFTFLSVDEIAAFEESDKSVQGRPAGQG-- 302

Query: 301 IIATEITTMVHGRE--EAEKAATAAMECFDMS---------IHSQHMPTISISKDEVSRG 349
           ++A E+T +VHG E   + +  TAA+   D++         +    +PT  +   E +  
Sbjct: 303 VLAKEVTRLVHGEEGLASSERITAALFSGDLASLTETDLAQLAQDGLPTTELEASEQT-- 360

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
             ++ ++ ++  A S   AR  + + A+ +N   +++ ++ +K +D
Sbjct: 361 --IVEVLTQSELAKSNKMAREFIGNGAVSVNGEKVADAEVILKKED 404


>gi|97197320|sp|Q65G35|SYY1_BACLD RecName: Full=Tyrosyl-tRNA synthetase 1; AltName:
           Full=Tyrosine--tRNA ligase 1; Short=TyrRS 1
          Length = 421

 Score =  279 bits (714), Expect = 6e-73,   Method: Compositional matrix adjust.
 Identities = 151/386 (39%), Positives = 230/386 (59%), Gaps = 20/386 (5%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L  LS RG I Q ++   L  L  +  ++ Y G+D TA SLH GHL  +++L   Q  GH
Sbjct: 5   LDDLSFRGLIQQQTDEAGLRELLDKEKISLYSGFDPTADSLHIGHLLPILMLRRFQLAGH 64

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           +PI+L+GG T +IGDPS +   R +   + ++E  +KIK   S F+ +   +  A+M NN
Sbjct: 65  RPIALVGGATGLIGDPSGKKAERTLNNEEIVREWSQKIKNQLSRFLDFEAEENPAIMANN 124

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             W+  +  ID LR++G  F +N ML+ ++V SR+  E  +S+ EF+YMILQ+ DF+ L 
Sbjct: 125 YDWIGKMNVIDFLRDVGKNFGINYMLAKDTVSSRI--ETGISYTEFSYMILQSLDFLNLY 182

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGER-LKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
           +N +C+LQ+GGSDQWGNI  G++L  +  +  K F LT PL+T A GTK GKT  GAIWL
Sbjct: 183 RNQECKLQIGGSDQWGNITSGLELIRKSEENAKAFGLTIPLVTKADGTKFGKTEGGAIWL 242

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIATE 305
           +KE TS Y F+Q+W N DD DVV + K  T L   EI+ +A+      E  EA+K +A E
Sbjct: 243 DKEKTSAYEFYQFWINTDDRDVVKYLKYFTFLSKEEIEDLAEKTETAPEKREAQKRLAEE 302

Query: 306 ITTMVHGREEAEKAATAAMECF----------DMSIHSQHMPTISISK-DEVSRGMGLLT 354
           +T +VHGRE  E+A   +   F          ++ +  + +P++ + K DE+     L+ 
Sbjct: 303 VTVLVHGREAFEQAVNISKALFSGDIKQLTAEEVKVGFKGVPSLEVEKADELP----LVE 358

Query: 355 LIVKAGFATSTNEARRHLKSNAIKIN 380
           ++V++  + S  +AR  + + A+ +N
Sbjct: 359 ILVQSKLSPSKRQAREDITNGAVYVN 384


>gi|315223534|ref|ZP_07865389.1| tyrosine--tRNA ligase [Capnocytophaga ochracea F0287]
 gi|314946450|gb|EFS98444.1| tyrosine--tRNA ligase [Capnocytophaga ochracea F0287]
          Length = 450

 Score =  279 bits (713), Expect = 6e-73,   Method: Compositional matrix adjust.
 Identities = 158/429 (36%), Positives = 234/429 (54%), Gaps = 24/429 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG I  I    E  ++  +G+  AY+G D TA SLH GHL  +M+L   Q  
Sbjct: 22  NFIEELRWRGMIQDIMPETEQHLM--EGLRAAYVGIDPTADSLHIGHLVGVMMLRHFQNC 79

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY-GTGKTDALM 125
           GHKP +L+GG T +IGDPS +   R ++  + +  NI  IK   + F+ +  T    A +
Sbjct: 80  GHKPYALVGGATGMIGDPSGKSVERNLLTEEVLAHNIAGIKKQLAKFLDFESTAPNRAEL 139

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQS---LSFLEFNYMILQAY 182
           +NN  W+    ++  +R+IG   +VN M++ +SV+ R    ++   +SF EF+Y +LQ Y
Sbjct: 140 VNNYDWMKEFSFLSFIRDIGKHITVNYMMAKDSVKKRFDPNENTDGMSFTEFSYQLLQGY 199

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DF+ L +  +  LQMGGSDQWGNI  G +L  R+   K +ALT PL+T A GTK GK+  
Sbjct: 200 DFLHLYREKNLTLQMGGSDQWGNITTGTELIRRIAGGKAYALTCPLITKADGTKFGKSEG 259

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKK 300
           G +WL+ E TSPY F+QYW N  DAD   + K  T L   EI+ +     +   +   + 
Sbjct: 260 GNVWLDPEKTSPYKFFQYWINTSDADAERYIKIFTMLSKEEINTLIAQHTEAPHLRILQN 319

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDEV 346
            +A E+T +VHGREE EKA  A+   F  S  +                +P   +S  ++
Sbjct: 320 KLAEELTLLVHGREELEKAKKASQILFGNSTSADLRTLDEKTFLEVFDGVPQAEVSAADI 379

Query: 347 SRGMGLLTLI-VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLS 405
           + G+ ++ ++  K GF +S +EARR LK N+I +N   +  E  QI  +D      I L 
Sbjct: 380 TSGLDMIAILSAKTGFISSNSEARRALKENSISVNKEKVG-EDYQIGEKDLVDEKFILLQ 438

Query: 406 FGKKNHIIC 414
            GKKN+ I 
Sbjct: 439 RGKKNYFIV 447


>gi|34498527|ref|NP_902742.1| tyrosine-tRNA synthetase [Chromobacterium violaceum ATCC 12472]
 gi|81654998|sp|Q7NTI2|SYY_CHRVO RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|34104383|gb|AAQ60741.1| tyrosine-tRNA synthetase [Chromobacterium violaceum ATCC 12472]
          Length = 424

 Score =  279 bits (713), Expect = 7e-73,   Method: Compositional matrix adjust.
 Identities = 151/392 (38%), Positives = 224/392 (57%), Gaps = 23/392 (5%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           ++  L  L  RG I Q ++   L  L ++  VT Y G+D TA SLH G L  +++L   Q
Sbjct: 3   QTALLQDLEARGLIAQTTDMAALQELLNKESVTLYCGFDPTADSLHIGSLVPILMLKRFQ 62

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + GH+P++L+GG T +IGDPSF+   R++     I+  +EKI+     F+ +  G+  A+
Sbjct: 63  QAGHRPVALVGGATGMIGDPSFKAAERKLNTPDVIEGWVEKIRKQVEPFLSF-EGENAAV 121

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYD 183
           M NN  W   +  ++ LR+IG  FSVN M+  ESV+ R+ R+ Q +S+ EF+Y +LQ YD
Sbjct: 122 MANNYDWFGKMNALEFLRDIGKHFSVNAMIKKESVQQRINRDDQGISYTEFSYSLLQGYD 181

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F EL +   C+LQ+GGSDQWGNI  G DL  RL   +++ LT PL+T A GTK GKT SG
Sbjct: 182 FAELNQRLGCKLQIGGSDQWGNITAGTDLTRRLNQTQVYGLTMPLVTKADGTKFGKTESG 241

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL----QGKEINEAK 299
            IWL+ + TSPY F+Q+W    DADV  F +  + L + EI  + +     +GK   E +
Sbjct: 242 TIWLDAKKTSPYAFYQFWLGTADADVYKFLRYFSFLSVDEIASIEEADKSREGKP--EGQ 299

Query: 300 KIIATEITTMVHGREEAEKAATAAMECF----------DMSIHSQH-MPTISISKDEVSR 348
           +I+A ++T +VHG+   E A       F          D +  +Q  +PTI + K     
Sbjct: 300 RILAEQVTELVHGKAALEAAQRITHSLFSNDLTNLTADDFAQLAQDGLPTIKLDKS---- 355

Query: 349 GMGLLTLIVKAGFATSTNEARRHLKSNAIKIN 380
             GL+  +   G A S +EAR  ++S A+ +N
Sbjct: 356 ASGLIDALAAGGLAKSKSEARTFIQSGAVSVN 387


>gi|297181532|gb|ADI17718.1| tyrosyl-tRNA synthetase [uncultured Oceanospirillales bacterium
           HF0130_25G24]
          Length = 427

 Score =  279 bits (713), Expect = 7e-73,   Method: Compositional matrix adjust.
 Identities = 151/417 (36%), Positives = 237/417 (56%), Gaps = 18/417 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D +S L  R  I Q++   +L    + G    Y G+D TA SLH G +  L++L   Q  
Sbjct: 7   DIISELENRDLIAQLAGEDKLKEHIAAGKRAVYCGFDPTAESLHIGSVVPLLVLRRFQLA 66

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKPI+L+GG T +IGDPSF+   R++  S  ++E +E++K   S F+ +  G   A+++
Sbjct: 67  GHKPIALVGGATGLIGDPSFKSAERQLNPSNVVEEWVERLKPQLSQFLDFDCGTNSAVLV 126

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDFV 185
           NN  W  +   +  LR++G  FSVN M+  +SVR R++RE + +S+ EF+YM+LQ+ DF 
Sbjct: 127 NNLEWTQNRDLLSFLRDVGKHFSVNSMVQKDSVRQRIEREGEGISYTEFSYMLLQSLDFA 186

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           EL K +DC +Q+GGSDQWGNI  GIDL  R+   ++F +T+PL+T A GTK GKT  G I
Sbjct: 187 ELHKRFDCSIQVGGSDQWGNITGGIDLTRRIYQKQVFGVTTPLVTKADGTKFGKTEKGTI 246

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIA 303
           W++   TSPY  +Q+W N+ D DV  + +  T L + EI    ++    +   EA+ I+A
Sbjct: 247 WISANKTSPYALYQFWLNVSDLDVYKYLRYFTFLSIEEIQEIELSDKSSQSKPEAQSILA 306

Query: 304 TEITTMVHGRE--EAEKAATAAMECFDMS---------IHSQHMPTISISKDEVSRGMGL 352
           +E+T ++HG E   A K  + ++   D+S         +    +P  S +  +V     +
Sbjct: 307 SEVTKLLHGGEGLTAAKRISDSLFSGDISKLTRDDLKQLDLDGLPKTSFAGGQVD----I 362

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
           + ++V+   A S   AR  + +NAI +N S++ +  L +   +    G   L  GKK
Sbjct: 363 IQVLVRTELAKSNKMAREFIGNNAISVNGSLVHSGDLILDASNALEGGYFVLRRGKK 419


>gi|52786843|ref|YP_092672.1| tyrosyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|163119602|ref|YP_080258.2| tyrosyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|319647372|ref|ZP_08001594.1| tyrosyl-tRNA synthetase 1 [Bacillus sp. BT1B_CT2]
 gi|52349345|gb|AAU41979.1| TyrS [Bacillus licheniformis ATCC 14580]
 gi|145903112|gb|AAU24620.2| tyrosyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|317390719|gb|EFV71524.1| tyrosyl-tRNA synthetase 1 [Bacillus sp. BT1B_CT2]
          Length = 422

 Score =  279 bits (713), Expect = 7e-73,   Method: Compositional matrix adjust.
 Identities = 151/386 (39%), Positives = 230/386 (59%), Gaps = 20/386 (5%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L  LS RG I Q ++   L  L  +  ++ Y G+D TA SLH GHL  +++L   Q  GH
Sbjct: 6   LDDLSFRGLIQQQTDEAGLRELLDKEKISLYSGFDPTADSLHIGHLLPILMLRRFQLAGH 65

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           +PI+L+GG T +IGDPS +   R +   + ++E  +KIK   S F+ +   +  A+M NN
Sbjct: 66  RPIALVGGATGLIGDPSGKKAERTLNNEEIVREWSQKIKNQLSRFLDFEAEENPAIMANN 125

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             W+  +  ID LR++G  F +N ML+ ++V SR+  E  +S+ EF+YMILQ+ DF+ L 
Sbjct: 126 YDWIGKMNVIDFLRDVGKNFGINYMLAKDTVSSRI--ETGISYTEFSYMILQSLDFLNLY 183

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGER-LKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
           +N +C+LQ+GGSDQWGNI  G++L  +  +  K F LT PL+T A GTK GKT  GAIWL
Sbjct: 184 RNQECKLQIGGSDQWGNITSGLELIRKSEENAKAFGLTIPLVTKADGTKFGKTEGGAIWL 243

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIATE 305
           +KE TS Y F+Q+W N DD DVV + K  T L   EI+ +A+      E  EA+K +A E
Sbjct: 244 DKEKTSAYEFYQFWINTDDRDVVKYLKYFTFLSKEEIEDLAEKTETAPEKREAQKRLAEE 303

Query: 306 ITTMVHGREEAEKAATAAMECF----------DMSIHSQHMPTISISK-DEVSRGMGLLT 354
           +T +VHGRE  E+A   +   F          ++ +  + +P++ + K DE+     L+ 
Sbjct: 304 VTVLVHGREAFEQAVNISKALFSGDIKQLTAEEVKVGFKGVPSLEVEKADELP----LVE 359

Query: 355 LIVKAGFATSTNEARRHLKSNAIKIN 380
           ++V++  + S  +AR  + + A+ +N
Sbjct: 360 ILVQSKLSPSKRQAREDITNGAVYVN 385


>gi|318078324|ref|ZP_07985656.1| tyrosyl-tRNA synthetase [Streptomyces sp. SA3_actF]
          Length = 438

 Score =  279 bits (713), Expect = 7e-73,   Method: Compositional matrix adjust.
 Identities = 148/422 (35%), Positives = 236/422 (55%), Gaps = 11/422 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +D +  L  RG   Q ++   L    + G VT Y G+D TA+SLH GHL Q++ +  LQ+
Sbjct: 18  TDIVDDLKWRGLFAQSTDEEALRKALANGPVTFYCGFDPTAASLHVGHLVQVLTVRRLQQ 77

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+P++L+GG T  IGDP    E R +     I E + +++     F+ +  G + A M
Sbjct: 78  AGHRPLALVGGATGQIGDPRPTAE-RTLNDPATIAEWVNRLRAQIEPFLDF-DGPSAARM 135

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  W   +  I  LR+IG  F VN+ML+ ESV  RL+ EQ +S+ EF+Y +LQA DF+
Sbjct: 136 VNNLDWTSGLSAIAFLRDIGKHFRVNKMLTKESVARRLESEQGISYTEFSYQLLQAMDFL 195

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT-PKLFALTSPLLTTASGTKMGKTLSGA 244
           EL + + C LQ GGSDQWGN+  G+DL  R++   ++ AL +PL+T A GTK GK+ SGA
Sbjct: 196 ELYRRHGCVLQQGGSDQWGNLTAGVDLIHRVEPEAQVHALATPLMTKADGTKFGKSESGA 255

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINEAKKII 302
           +WL+  MT+PY F+Q+W N+DD D+  + + L+  P +E++ +  +  +  +   A++ +
Sbjct: 256 VWLDPAMTTPYAFYQFWLNVDDRDISRYTRILSFRPRAELEELEAVTAERPQARTAQRAL 315

Query: 303 ATEITTMVHGREEAEKAATAAMECFDM-SIHSQHMPTISISKDEVSRG-----MGLLTLI 356
           A E+TT+VHG  +      A+   F    +      T++ +  E+ R        ++ L+
Sbjct: 316 AEELTTLVHGEAQTRAVVAASRALFGQGELAELDEATLAAALGELPRASVAEPASVVDLL 375

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V+ G   S + ARR +K     +NN+ ++ E       +   +  + L  GKKN     +
Sbjct: 376 VETGLVASKSAARRTIKEGGAYVNNAKVTAEDAVPAASELLHSRWLVLRRGKKNLAAVEV 435

Query: 417 CG 418
            G
Sbjct: 436 TG 437


>gi|308174658|ref|YP_003921363.1| tyrosyl-tRNA synthetase [Bacillus amyloliquefaciens DSM 7]
 gi|307607522|emb|CBI43893.1| tyrosyl-tRNA synthetase [Bacillus amyloliquefaciens DSM 7]
 gi|328554588|gb|AEB25080.1| tyrosyl-tRNA synthetase [Bacillus amyloliquefaciens TA208]
 gi|328912992|gb|AEB64588.1| tyrosyl-tRNA synthetase [Bacillus amyloliquefaciens LL3]
          Length = 421

 Score =  279 bits (713), Expect = 7e-73,   Method: Compositional matrix adjust.
 Identities = 153/389 (39%), Positives = 229/389 (58%), Gaps = 19/389 (4%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           ++ L  LS RG I Q+++   L+   ++  +  Y G+D TA SLH GHL  ++ L   Q 
Sbjct: 2   TNLLEDLSFRGLIQQMTDEEGLNKQLNEEKIRLYSGFDPTADSLHIGHLLPILTLRRFQL 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH PI+L+GG T +IGDPS +   R +     + E  +KIK   S F+ +  G+  A++
Sbjct: 62  AGHHPIALVGGATGLIGDPSGKKAERTLNTQDIVVEWSQKIKNQLSRFLDFEAGENPAVI 121

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
            NN  W+  +  I+ LR++G  F +N ML+ ++V SR+  E  +S+ EF+YMILQ+YDF+
Sbjct: 122 ANNFDWIGKMSIIEFLRDVGKNFGINYMLAKDTVSSRI--ETGISYTEFSYMILQSYDFL 179

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKLFALTSPLLTTASGTKMGKTLSG 243
            L +  +C+LQ+GGSDQWGNI  G++L  + +    K F LT PL+T A GTK GKT  G
Sbjct: 180 NLYREKNCKLQIGGSDQWGNITAGLELIRKSEEEGAKAFGLTIPLVTKADGTKFGKTEGG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKI 301
           AIWL+KE TSPY F+Q+W N DD DVV + K  T L   EI+  A+      E  EA+K 
Sbjct: 240 AIWLDKEKTSPYEFYQFWINTDDRDVVKYLKYFTFLSKEEIEAYAEKTETAPEKREAQKR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECF----------DMSIHSQHMPTISISKDEVSRGMG 351
           +A E+T +VHGRE  E+A   +   F          D+ +  + +P  S  KD  S  + 
Sbjct: 300 LAEEVTVLVHGREALEQAVHISQALFSGNIKELSAQDVKVGFKDVP--SFEKDR-SEELS 356

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKIN 380
           L+ ++V++  + S  +AR  +++ A+ IN
Sbjct: 357 LVDVLVESKLSPSKRQAREDIQNGAVYIN 385


>gi|312109900|ref|YP_003988216.1| tyrosyl-tRNA synthetase [Geobacillus sp. Y4.1MC1]
 gi|311215001|gb|ADP73605.1| tyrosyl-tRNA synthetase [Geobacillus sp. Y4.1MC1]
          Length = 419

 Score =  279 bits (713), Expect = 7e-73,   Method: Compositional matrix adjust.
 Identities = 153/387 (39%), Positives = 223/387 (57%), Gaps = 19/387 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D L  L  RG I+Q+++   L  L ++  VT Y G+D TA SLH GHL  ++ L   Q  
Sbjct: 2   DLLQELEWRGLINQVTDKEGLQKLLNEEKVTLYSGFDPTADSLHIGHLLPILTLRRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI+L+GG T +IGDPS +   R +   + +Q+   +IK   + F+ +   +  A + 
Sbjct: 62  GHRPIALVGGATGLIGDPSGKKSERTLNPKETVQQWSNRIKEQLARFLDFDAEENPAKIA 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W+ S+  I  LR++G  F +N ML+ ESV+SR+  E  +SF EF+YMILQ+ DF++
Sbjct: 122 NNYDWIGSLDVISFLRDVGKHFGINYMLAKESVQSRI--ETGISFTEFSYMILQSLDFLK 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASGTKMGKTLSGAI 245
           L +   CRLQ+GGSDQWGNI  G++L  + +   K F LT PL+T A GTK GKT  GA+
Sbjct: 180 LYQTEQCRLQIGGSDQWGNITAGLELIRKTEGDAKAFGLTVPLVTKADGTKFGKTEGGAV 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINEAKKIIA 303
           WL+KE TSPY F+Q+W N DD DV+ + K  T L   EI+ + K   K  E   A+K +A
Sbjct: 240 WLDKEKTSPYEFYQFWINTDDRDVIKYLKYFTFLSKEEIEELEKQLQKTPEQRAAQKALA 299

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLL 353
            E+T +VHG +  ++A   +   F  S+            + +P+     +EV     L+
Sbjct: 300 EEMTKLVHGEDALKQAVRISEALFSGSVSQLTAEEIEQGFKDVPSFEYEGEEVP----LV 355

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKIN 380
            L+V A    S  +AR  + + AI IN
Sbjct: 356 ELLVMAKIVPSKRQAREDIANGAIYIN 382


>gi|327459630|gb|EGF05976.1| tyrosine--tRNA ligase [Streptococcus sanguinis SK1]
 gi|327473095|gb|EGF18522.1| tyrosine--tRNA ligase [Streptococcus sanguinis SK408]
 gi|327490874|gb|EGF22655.1| tyrosine--tRNA ligase [Streptococcus sanguinis SK1058]
          Length = 419

 Score =  279 bits (713), Expect = 7e-73,   Method: Compositional matrix adjust.
 Identities = 143/384 (37%), Positives = 221/384 (57%), Gaps = 11/384 (2%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L ERG + Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  GHKP 
Sbjct: 8   LKERGLVFQTTDEAALRKALEEGQVSYYSGYDPTADSLHLGHLVAILTSRRLQLAGHKPY 67

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSFRD  R +   + ++  ++ I+   S F+ +  G   A M+NN  W
Sbjct: 68  ALVGGATGLIGDPSFRDAERSLQTKETVEGWVKSIQDQLSRFLDFEKGDNKAEMVNNYDW 127

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
             SI +ID LR++G +F+VN M+S +SV+SR+  E  +S+ EF Y I+Q YDF  L +N+
Sbjct: 128 FSSISFIDFLRDVGKYFTVNYMMSKDSVKSRI--ETGISYTEFAYQIMQGYDFYILNQNH 185

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
           D  LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WLN + 
Sbjct: 186 DVTLQIGGSDQWGNMTAGTELLRRKADKTGHVITVPLITDATGKKFGKSEGNAVWLNPDK 245

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATEITTM 309
           TSPY  +Q+W N+ DAD + F K  T L + EI+ + +      +E  A+K++A E+ ++
Sbjct: 246 TSPYEMYQFWMNVMDADAIRFLKIFTFLSLDEIEEIRQQFEAAPHERLAQKVLAREVVSL 305

Query: 310 VHGREEAEKAATAAMECFDMSIHS-------QHMPTISISKDEVSRGMGLLTLIVKAGFA 362
           VHG+E  ++A     + F  +I +       Q +  +   + +    + ++ L+V AG  
Sbjct: 306 VHGQEAYQEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVQAEDNLNIVELLVTAGVV 365

Query: 363 TSTNEARRHLKSNAIKINNSIISN 386
            S  +AR  +++ AI +N   I +
Sbjct: 366 NSKRQAREDVQNGAIYLNGERIQD 389


>gi|297171957|gb|ADI22943.1| tyrosyl-tRNA synthetase [uncultured actinobacterium HF0500_35G12]
          Length = 428

 Score =  278 bits (712), Expect = 9e-73,   Method: Compositional matrix adjust.
 Identities = 150/400 (37%), Positives = 214/400 (53%), Gaps = 27/400 (6%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L  RG +   ++   L      G VT Y G+D TA SLH GHL  L+ L   Q  G
Sbjct: 6   ILDDLLARGLVQDSTDREALRERLDAGPVTLYCGFDPTADSLHIGHLVPLLALRRFQDAG 65

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY---GTGKTDAL 124
           H+P++L GG T +IGDPS R E R ++  +E+  N+E +     +F+++   G G   AL
Sbjct: 66  HRPVALAGGATGMIGDPSGRSEERNLLAGEELSANVEAVAAQLRAFLRFDDLGPGDQAAL 125

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           +L+N  W   ++ ++ LR++G   +V  ML+ ESV++RL  EQ LSF EF+YM+LQA DF
Sbjct: 126 LLDNREWTVGVEVLEFLRQVGKHVTVGTMLAKESVKARLSGEQGLSFTEFSYMLLQANDF 185

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
            EL + + C LQ+GGSDQWGNI  GIDL  R     +F LT PL+T + G K GKT  G 
Sbjct: 186 YELHQRHGCELQIGGSDQWGNITAGIDLVRRRTGSTVFGLTVPLVTRSDGAKFGKTADGT 245

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKKII 302
           +WL+   T PY   QY+  IDD DV     +LT +P++E+  +        E   A++ +
Sbjct: 246 VWLDPARTLPYELHQYFLQIDDRDVEQLLLQLTLVPVAEVAEVMAGHAASPEGRTAQRRL 305

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGM------------ 350
           A E+ T+VHG EE  +A  AA   F  +      PT+ I   E  RG+            
Sbjct: 306 AEEVCTLVHGGEETVRADLAARGLFGAT-----PPTVEIL--EALRGIVPETIVELAALG 358

Query: 351 ---GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNE 387
               L+  +V +G   S  +ARR +    + +N    S E
Sbjct: 359 GQESLVDALVASGLCGSRGDARRTIAGGGVSVNGDRQSGE 398


>gi|302518284|ref|ZP_07270626.1| tyrosyl-tRNA synthetase [Streptomyces sp. SPB78]
 gi|302427179|gb|EFK98994.1| tyrosyl-tRNA synthetase [Streptomyces sp. SPB78]
          Length = 422

 Score =  278 bits (712), Expect = 9e-73,   Method: Compositional matrix adjust.
 Identities = 148/422 (35%), Positives = 236/422 (55%), Gaps = 11/422 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +D +  L  RG   Q ++   L    + G VT Y G+D TA+SLH GHL Q++ +  LQ+
Sbjct: 2   TDIVDDLKWRGLFAQSTDEEALRKALANGPVTFYCGFDPTAASLHVGHLVQVLTVRRLQQ 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+P++L+GG T  IGDP    E R +     I E + +++     F+ +  G + A M
Sbjct: 62  AGHRPLALVGGATGQIGDPRPTAE-RTLNDPATIAEWVNRLRAQIEPFLDF-DGPSAARM 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  W   +  I  LR+IG  F VN+ML+ ESV  RL+ EQ +S+ EF+Y +LQA DF+
Sbjct: 120 VNNLDWTSGLSAIAFLRDIGKHFRVNKMLTKESVARRLESEQGISYTEFSYQLLQAMDFL 179

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT-PKLFALTSPLLTTASGTKMGKTLSGA 244
           EL + + C LQ GGSDQWGN+  G+DL  R++   ++ AL +PL+T A GTK GK+ SGA
Sbjct: 180 ELYRRHGCVLQQGGSDQWGNLTAGVDLIHRVEPEAQVHALATPLMTKADGTKFGKSESGA 239

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINEAKKII 302
           +WL+  MT+PY F+Q+W N+DD D+  + + L+  P +E++ +  +  +  +   A++ +
Sbjct: 240 VWLDPAMTTPYAFYQFWVNVDDRDISRYTRILSFRPRAELEELEAVTAERPQARTAQRAL 299

Query: 303 ATEITTMVHGREEAEKAATAAMECFDM-SIHSQHMPTISISKDEVSRG-----MGLLTLI 356
           A E+TT+VHG  +      A+   F    +      T++ +  E+ R        ++ L+
Sbjct: 300 AEELTTLVHGEAQTRAVVAASRALFGQGELAELDEATLAAALGELPRASVAEPASVVDLL 359

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V+ G   S + ARR +K     +NN+ ++ E       +   +  + L  GKKN     +
Sbjct: 360 VETGLVASKSAARRTIKEGGAYVNNAKVTAEDAVPAASELLHSRWLVLRRGKKNLAAVEV 419

Query: 417 CG 418
            G
Sbjct: 420 TG 421


>gi|300858380|ref|YP_003783363.1| tyrosyl-tRNA synthetase [Corynebacterium pseudotuberculosis FRC41]
 gi|300685834|gb|ADK28756.1| Tyrosyl-tRNA synthetase [Corynebacterium pseudotuberculosis FRC41]
 gi|302206093|gb|ADL10435.1| Putative tyrosyl-tRNA synthetase [Corynebacterium
           pseudotuberculosis C231]
 gi|302330646|gb|ADL20840.1| tyrosyl-tRNA synthetase [Corynebacterium pseudotuberculosis 1002]
 gi|308276330|gb|ADO26229.1| Tyrosyl-tRNA synthetase [Corynebacterium pseudotuberculosis I19]
          Length = 426

 Score =  278 bits (712), Expect = 9e-73,   Method: Compositional matrix adjust.
 Identities = 162/410 (39%), Positives = 236/410 (57%), Gaps = 19/410 (4%)

Query: 15  RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLM 74
           RG I+  ++   L   C Q  +T Y G+D T  SLHAGHL  +++L   Q+ GH+P++L 
Sbjct: 14  RGLINDSTDIDALREACEQ-PITLYCGFDPTGDSLHAGHLVPMVMLRRFQQFGHRPLTLA 72

Query: 75  GGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKT-DALMLNNETWLC 133
           GG T +IGDP    E R M+   ++ +N+E IKG    F+ + +G+  DA+M+NN  W  
Sbjct: 73  GGATGMIGDPREVGE-RVMLTEDKVAQNLEAIKGQLRRFVSFESGQNNDAIMVNNADWTA 131

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDC 193
            +  I+ LR++G  FS+N ML  E+V+ RL  +  +S+ EF+YM+LQ+ DFV L K YDC
Sbjct: 132 GMSVIEFLRDVGKNFSLNTMLDRETVKRRLASD-GISYTEFSYMLLQSNDFVHLRKKYDC 190

Query: 194 RLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA-IWLNKEMT 252
            LQ+GG DQWGNII G+DL  R+   K+ ALT PL+T A G K GK+  G  +WL+ E T
Sbjct: 191 ILQIGGGDQWGNIISGVDLNRRVDGTKVHALTVPLVTDAQGQKFGKSTGGGKLWLDPEQT 250

Query: 253 SPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI---NEAKKIIATEITTM 309
           SPY+++QY+ N  D  V+++ K  T L  SEI  + ++Q  E     EA++ +A E+TT+
Sbjct: 251 SPYSWYQYFLNAGDTVVINYLKWFTFLTESEIAEL-EVQVAEAPHKREAQRRLAREMTTL 309

Query: 310 VHGREEAEKA---------ATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           VHG E A KA           A++E  D       +    +++ E      ++ L+V AG
Sbjct: 310 VHG-EAATKAVELAAQALFGKASLEDLDEQTLIGAVSETPVAEVEEGEPRTIVDLLVAAG 368

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            A S   ARR +K     +NN  IS+E  Q   +D      + L  GKKN
Sbjct: 369 LADSKGAARRAVKEGGAYVNNVRISDETWQPSEEDLLHGSWVVLRKGKKN 418


>gi|318057733|ref|ZP_07976456.1| tyrosyl-tRNA synthetase [Streptomyces sp. SA3_actG]
          Length = 422

 Score =  278 bits (712), Expect = 9e-73,   Method: Compositional matrix adjust.
 Identities = 148/422 (35%), Positives = 236/422 (55%), Gaps = 11/422 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +D +  L  RG   Q ++   L    + G VT Y G+D TA+SLH GHL Q++ +  LQ+
Sbjct: 2   TDIVDDLKWRGLFAQSTDEEALRKALANGPVTFYCGFDPTAASLHVGHLVQVLTVRRLQQ 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+P++L+GG T  IGDP    E R +     I E + +++     F+ +  G + A M
Sbjct: 62  AGHRPLALVGGATGQIGDPRPTAE-RTLNDPATIAEWVNRLRAQIEPFLDF-DGPSAARM 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  W   +  I  LR+IG  F VN+ML+ ESV  RL+ EQ +S+ EF+Y +LQA DF+
Sbjct: 120 VNNLDWTSGLSAIAFLRDIGKHFRVNKMLTKESVARRLESEQGISYTEFSYQLLQAMDFL 179

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT-PKLFALTSPLLTTASGTKMGKTLSGA 244
           EL + + C LQ GGSDQWGN+  G+DL  R++   ++ AL +PL+T A GTK GK+ SGA
Sbjct: 180 ELYRRHGCVLQQGGSDQWGNLTAGVDLIHRVEPEAQVHALATPLMTKADGTKFGKSESGA 239

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINEAKKII 302
           +WL+  MT+PY F+Q+W N+DD D+  + + L+  P +E++ +  +  +  +   A++ +
Sbjct: 240 VWLDPAMTTPYAFYQFWLNVDDRDISRYTRILSFRPRAELEELEAVTAERPQARTAQRAL 299

Query: 303 ATEITTMVHGREEAEKAATAAMECFDM-SIHSQHMPTISISKDEVSRG-----MGLLTLI 356
           A E+TT+VHG  +      A+   F    +      T++ +  E+ R        ++ L+
Sbjct: 300 AEELTTLVHGEAQTRAVVAASRALFGQGELAELDEATLAAALGELPRASVAEPASVVDLL 359

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V+ G   S + ARR +K     +NN+ ++ E       +   +  + L  GKKN     +
Sbjct: 360 VETGLVASKSAARRTIKEGGAYVNNAKVTAEDAVPAASELLHSRWLVLRRGKKNLAAVEV 419

Query: 417 CG 418
            G
Sbjct: 420 TG 421


>gi|312865572|ref|ZP_07725798.1| tyrosine--tRNA ligase [Streptococcus downei F0415]
 gi|311098900|gb|EFQ57118.1| tyrosine--tRNA ligase [Streptococcus downei F0415]
          Length = 418

 Score =  278 bits (712), Expect = 9e-73,   Method: Compositional matrix adjust.
 Identities = 147/395 (37%), Positives = 223/395 (56%), Gaps = 13/395 (3%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L ERG I Q ++  +L      G V+ Y GYD TA SLH GHL  +++   LQ  GHKP 
Sbjct: 7   LKERGLIFQTTDEEDLKKALEAGSVSFYSGYDPTADSLHLGHLVPILVCRHLQLAGHKPY 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+GG T +IGDPSF+D  R +   + ++  ++KI+   S F+ +  G   A M NN  W
Sbjct: 67  PLVGGATGLIGDPSFKDTERSLQTKETVEGWVKKIQKQLSRFLDFENGDNKAEMTNNYDW 126

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
             SI +ID LR++G +F++N M+S ESV+ R+  E  +S+ EF Y I+Q YDF EL + +
Sbjct: 127 FGSISFIDFLRDVGKYFTINYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFYELNRQH 184

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
              LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WL+ + 
Sbjct: 185 GVTLQIGGSDQWGNMTAGTELLRRKADKTGHVITVPLITDATGKKFGKSEGNAVWLDADK 244

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATEITTM 309
           TSPY  +Q+W N+ D D V F K  T LP+ EI  + +      +E  A+KI+A E+ T+
Sbjct: 245 TSPYEMYQFWLNVMDDDAVRFLKIFTFLPLDEIAEIEEKFNAARHERLAQKILAKEVVTL 304

Query: 310 VHGREEAEKAATAAMECFDMSIHS-------QHMPTISISKDEVSRGMGLLTLIVKAGFA 362
           VHG    ++A     + F  +I +       Q +  +     +    + ++ ++VK+G +
Sbjct: 305 VHGEAAYKEALQITKQLFAGNIRALSAQELKQGLSGVPNYAVQAEDDLNIVEILVKSGIS 364

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
           +S  +AR  +++ AI IN   I +  L  +L D D
Sbjct: 365 SSKRQAREDVQNGAIYINGERIQD--LDYQLSDAD 397


>gi|319952577|ref|YP_004163844.1| tyrosyl-tRNA synthetase [Cellulophaga algicola DSM 14237]
 gi|319421237|gb|ADV48346.1| Tyrosyl-tRNA synthetase [Cellulophaga algicola DSM 14237]
          Length = 431

 Score =  278 bits (712), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 152/430 (35%), Positives = 236/430 (54%), Gaps = 23/430 (5%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           K++F++ L  RG +H      E  ++    + +AY+G D TA SLH GHL  +M+L   Q
Sbjct: 2   KTNFVAELQWRGMLHDAMPGTEEHLMNE--MQSAYVGIDPTADSLHIGHLVGVMMLRHFQ 59

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY-GTGKTDA 123
             GHKP +L+GG T +IGDPS +   R ++  + ++ N + +K   S F+ + G     A
Sbjct: 60  LAGHKPYALIGGATGMIGDPSGKSTERNLLDEKTLRHNQDALKAQLSRFLDFSGAADNAA 119

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQA 181
           +++NN  W+    +++ +R++G   +VN M++ +SV+ RL  E  + +SF EF Y ++Q 
Sbjct: 120 ILVNNYDWMKDFSFLEFIRDVGKHITVNYMMAKDSVKKRLSSEAKEGMSFTEFTYQLVQG 179

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
           YDF+ L K ++C LQMGGSDQWGNI  G +L  R+   K +ALT PL+T A GTK GKT 
Sbjct: 180 YDFLHLFKEHNCTLQMGGSDQWGNITTGTELIRRMGGGKGYALTCPLITKADGTKFGKTE 239

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA--KLQGKEINEAK 299
            G +WL+ E TSPY F+QYW N  D D   + K  T +   EI+ +     +   +   +
Sbjct: 240 GGNVWLDAERTSPYKFYQYWLNTSDEDAEKYIKIFTFIGKEEIEALVAEHKEAPHLRVLQ 299

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDE 345
           K +A EIT MVH +EE + A  A+   F  S  +              + +P   ++  +
Sbjct: 300 KRLADEITVMVHSQEELDNAVEASGILFGKSTAASLKKLNEKTFLDIFEGVPQAEVAMAD 359

Query: 346 VSRGMGLL-TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           V  G+ ++  L  K  F  S  EARR LK N+I +N   +  + + I  +D  +   + L
Sbjct: 360 VEEGLDMIGALAAKTNFLGSNGEARRELKQNSISVNKEKVKEDYI-ITKEDLINDKFVLL 418

Query: 405 SFGKKNHIIC 414
             GKKN+ + 
Sbjct: 419 QRGKKNYFVV 428


>gi|227536143|ref|ZP_03966192.1| tyrosine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33300]
 gi|227244040|gb|EEI94055.1| tyrosine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33300]
          Length = 427

 Score =  278 bits (711), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 148/425 (34%), Positives = 229/425 (53%), Gaps = 19/425 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG +  I    E   L ++  V+ YIG+D T  SLH GHLTQ+M L   Q  
Sbjct: 2   NFVEELRWRGMLQDIMPGTEE--LLNKEKVSGYIGFDPTGDSLHVGHLTQIMTLIHFQNA 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP++L+GG T +IGDPSF+   R ++  + +  N+  +K   S F+ +G G+ DA M+
Sbjct: 60  GHKPVALVGGATGMIGDPSFKSAERNLLDEETLNHNVASLKHQLSKFLTFGEGELDAKMV 119

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W    K++D +R+IG   +VN M++ +SV+ RL+ E  LSF EF+Y ++Q YDF  
Sbjct: 120 NNYDWFKDFKFLDFIRDIGKLITVNYMMAKDSVKKRLEGENGLSFTEFSYQLIQGYDFYY 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L K+++C++QMGGSDQWGNI+ G +   R      FALT+ L+  + G K GKT SGA+W
Sbjct: 180 LWKHHNCKIQMGGSDQWGNIVTGTEFIRRQDQGTAFALTTQLIKKSDGQKFGKTESGAVW 239

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKKIIAT 304
           L+ + T+PY ++Q+W N  D D  ++ +  T  P  EID +             +K +A 
Sbjct: 240 LDAKKTTPYKYYQFWLNATDDDAKNWIRIFTLKPKEEIDAIIAEHDAAPHTRTVQKALAK 299

Query: 305 EITTMVHGREEAEKAATAAMECF-----DMSIHSQH---------MPTISISKDEVSRGM 350
           +IT   H  ++ E A   +   F     D     +H         +P  +ISK E++ G+
Sbjct: 300 DITIRTHSEKDYETALKTSEFLFGNGSLDFLGDLEHEAVLDVFDGVPQFTISKSELAEGI 359

Query: 351 GLLTLIV-KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
            +L L+  K     S  EAR+  +   + +N   +S        ++  +   I    GKK
Sbjct: 360 NILDLLATKTQIFPSKGEARKMTEGGGVSVNKEKVSGTDATFTTENLINNKYIIAQRGKK 419

Query: 410 NHIIC 414
           N+ + 
Sbjct: 420 NYYLI 424


>gi|146298313|ref|YP_001192904.1| tyrosyl-tRNA synthetase [Flavobacterium johnsoniae UW101]
 gi|259516994|sp|A5FMI1|SYY_FLAJ1 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|146152731|gb|ABQ03585.1| tyrosyl-tRNA synthetase [Flavobacterium johnsoniae UW101]
          Length = 431

 Score =  278 bits (711), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 160/427 (37%), Positives = 240/427 (56%), Gaps = 24/427 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG  H  S P   + L  + V +AYIG+D TA SLH G + Q++LL  L+  GH+PI
Sbjct: 8   LKWRGLYHD-SMPGTEEQLLKE-VTSAYIGFDPTADSLHIGSMVQIILLVHLKNFGHQPI 65

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA-LMLNNET 130
           +L+GG T +IGDPS + + R ++  + + +N+  IK + S F+ + + + +A +M+NN  
Sbjct: 66  ALVGGATGMIGDPSGKSDERNLLNEETLAKNVAGIKSVLSRFLDFNSKEQNAPIMVNNYD 125

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDFVELAK 189
           W+    +ID  RE+G   +VN M++ +SV+ R+  E + +SF EF Y ++Q YDF  L K
Sbjct: 126 WMKEFSFIDFAREVGKRITVNYMMAKDSVKKRINGEGEGMSFTEFTYQLIQGYDFYHLYK 185

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERL--KTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
           N +C LQMGGSDQWGNI  G +L  R+  +  K FALT+PL+T A G+K GK+  G +WL
Sbjct: 186 NNNCLLQMGGSDQWGNITTGTELVRRMGGENAKAFALTTPLITKADGSKFGKSEGGNVWL 245

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM-AKLQ-GKEINEAKKIIATE 305
           + + TS Y F+Q+W N  DAD   + K  T L    ID + A+ Q    +   +K +A E
Sbjct: 246 DADKTSVYKFYQFWVNATDADAEKYIKIFTFLDKETIDALIAEHQTAPHLRILQKKLAEE 305

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDEVSRGMG 351
           IT  VH +EE EKA  A+   F  S                   +P   I+K ++  G+ 
Sbjct: 306 ITIFVHSKEELEKAIQASNILFGNSTADDLKKLDEKTFLEVFDGVPQAEIAKADLENGLD 365

Query: 352 LLTLI-VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
           ++T++  K GF  S  EARR L +N+I +N   I  E   +   D  +   + L  GKKN
Sbjct: 366 IVTVLNEKTGFFKSNGEARRALTANSISVNREKIK-EDFVLTANDLINNQFVLLQSGKKN 424

Query: 411 HIICHLC 417
           + +  + 
Sbjct: 425 YFVIRVV 431


>gi|59712334|ref|YP_205110.1| tyrosyl-tRNA synthetase [Vibrio fischeri ES114]
 gi|197335989|ref|YP_002156549.1| tyrosyl-tRNA synthetase [Vibrio fischeri MJ11]
 gi|75353688|sp|Q5E424|SYY_VIBF1 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|254765187|sp|B5FFR9|SYY_VIBFM RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|59480435|gb|AAW86222.1| tyrosyl-tRNA synthetase [Vibrio fischeri ES114]
 gi|197317479|gb|ACH66926.1| tyrosyl-tRNA synthetase [Vibrio fischeri MJ11]
          Length = 426

 Score =  278 bits (710), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 154/406 (37%), Positives = 234/406 (57%), Gaps = 22/406 (5%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           ++ L  L  RG I Q +   EL    S    T Y G+D TA SLH G L  L++L   Q+
Sbjct: 5   NELLQDLKARGLIAQCTADEELAEHLSTDCRTLYCGFDPTADSLHIGSLVPLLVLKRFQQ 64

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++  ++ + + + KIK   S+F+ +   K  A +
Sbjct: 65  AGHKPLALVGGATGLIGDPSFKAAERQLNTNEVVGDWVNKIKAQVSAFVDFTEEKNGAEV 124

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQS-LSFLEFNYMILQAYDF 184
           +NN  W+  I  I+ +R++G  FSVN M+  ESV+ R+ RE S +SF EF+YM+LQ+YDF
Sbjct: 125 VNNLDWIGQINVIEFMRDVGKHFSVNAMIQKESVKQRIDREGSGISFTEFSYMLLQSYDF 184

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K  +C LQ+GGSDQWGNI  GIDL  R+   K+F LT PL+T + GTK GKT SG 
Sbjct: 185 AALNKAKECTLQIGGSDQWGNITGGIDLTRRMNRNKVFGLTLPLVTKSDGTKFGKTESGT 244

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK----LQGKEINEAKK 300
           IWL+   TSPY F+Q+W    DADV +F +  T L + EI  + +    +QG+   E + 
Sbjct: 245 IWLDSNKTSPYAFYQFWLGTADADVYNFLRFFTFLTVEEIAAVEESDKSVQGRP--EGQG 302

Query: 301 IIATEITTMVHGREEAEKAA--TAAMECFDMSIHSQ---------HMPTISISKDEVSRG 349
           I+A E+T +VHG E    A   T A+   D+S  ++          +P+  +   E +  
Sbjct: 303 ILAREVTRLVHGEEGLASAERITKALFSGDLSSLTETDLAQLALDGLPSTELEASEQT-- 360

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
             ++ ++ ++  A S   AR  + + A+ +N   +++ +  +K +D
Sbjct: 361 --IVEVLTQSELAKSNKMAREFIGNGAVSVNGEKVADTEAVLKKED 404


>gi|268592621|ref|ZP_06126842.1| tyrosine--tRNA ligase [Providencia rettgeri DSM 1131]
 gi|291311759|gb|EFE52212.1| tyrosine--tRNA ligase [Providencia rettgeri DSM 1131]
          Length = 424

 Score =  278 bits (710), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 150/390 (38%), Positives = 216/390 (55%), Gaps = 21/390 (5%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           ++ +  L ERG + Q+++   L    +QG ++ Y G+D TA SLH GHL  L+ L   Q 
Sbjct: 4   NNLIKQLQERGLVAQVTDEDALAERLAQGPISLYCGFDPTADSLHLGHLVPLLCLKRFQL 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++  ++ +QE +EKI+   S F+ +  G   A +
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKATERKLNTTETVQEWVEKIRNQVSPFLSFDCGDNSARL 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYDF 184
            NN  W   +  +  LR+IG  FSVN+M++ ESV+ RL R+   +SF EF Y +LQ YDF
Sbjct: 124 ANNYDWFGKMDVLTFLRDIGKHFSVNQMINRESVKQRLNRDDVGISFTEFAYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             + K     LQ+GGSDQWGNI  GIDL  RL   ++F +T PL+T A GTK GKT  GA
Sbjct: 184 ANMNKEMGVELQIGGSDQWGNITSGIDLTRRLHQNQVFGMTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKI 301
           +WL+ + TS Y F+Q+W N  DADV  F K  T + + EI+ +    K  GK    A+ +
Sbjct: 244 VWLDSKKTSQYKFYQFWINTADADVYRFLKFFTFMELDEINALEEEDKNSGK-APRAQYV 302

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS-----------QHMPTISISKDEVSRGM 350
           +A  +T +VHG E    A       F  ++               MP I++       G 
Sbjct: 303 LAELVTKLVHGEEGLAAAKRITESLFSGAVSDLTEADFEQLAQDGMPCITLEA-----GA 357

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKIN 380
            L   +V +    S  +AR  + SNA+ IN
Sbjct: 358 DLQQALVDSELVPSRGQARTTISSNAVSIN 387


>gi|288904305|ref|YP_003429526.1| tyrosyl-tRNA synthetase [Streptococcus gallolyticus UCN34]
 gi|306830335|ref|ZP_07463505.1| tyrosine--tRNA ligase [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|325977301|ref|YP_004287017.1| tyrosyl-tRNA synthetase [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
 gi|288731030|emb|CBI12574.1| tyrosyl-tRNA synthetase [Streptococcus gallolyticus UCN34]
 gi|304427360|gb|EFM30462.1| tyrosine--tRNA ligase [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|325177229|emb|CBZ47273.1| tyrS [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069]
          Length = 418

 Score =  277 bits (709), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 151/417 (36%), Positives = 229/417 (54%), Gaps = 21/417 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L ERG + Q ++   L    ++G V+ Y GYD TA SLH GHL  ++    LQ  GHKP 
Sbjct: 7   LKERGLVFQTTDEEALVKALTEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAGHKPY 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+D  R +   + +   + KI+   S F+ +  G   A+M+NN  W
Sbjct: 67  ALVGGATGLIGDPSFKDAERSLQTKETVDGWVTKIQNQLSRFLDFENGDNKAVMVNNYDW 126

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
             ++ +ID LR++G +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF EL   Y
Sbjct: 127 FGNVSFIDFLRDVGKYFTVNAMMSKESVKKRI--ETGISYTEFAYQIMQGYDFYELNDKY 184

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
           +  LQ+GGSDQWGN+  G +L  R        +T PL+T ++G K GK+   A+WL+ + 
Sbjct: 185 NVTLQIGGSDQWGNMTAGTELLRRKADKTGHVMTVPLITDSTGKKFGKSEGNAVWLDADK 244

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATEITTM 309
           TSPY  +Q+W N+ D D V F K  T L + EI  + K      +E  A+KI+A E+ T+
Sbjct: 245 TSPYEMYQFWLNVMDDDAVRFLKIFTFLSLEEIAEIEKEFNAARHERLAQKILAREVVTL 304

Query: 310 VHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIVKA 359
           VHG E  ++A     + F  +I S           ++P  ++  D+      ++ ++V A
Sbjct: 305 VHGEEAYKQALKITEQLFAGNIKSLSAKELKQGLNNVPNYAVQADD---NRNIVEVLVAA 361

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN--IKLSFGKKNHIIC 414
             + S  +AR  +++ AI IN   I +  L   L D D   N    +  GKK + + 
Sbjct: 362 KISPSKRQAREDVQNGAIYINGERIQD--LAYTLSDDDKIDNELTVIRRGKKKYFVL 416


>gi|269967210|ref|ZP_06181275.1| tyrosyl-tRNA synthetase [Vibrio alginolyticus 40B]
 gi|269828200|gb|EEZ82469.1| tyrosyl-tRNA synthetase [Vibrio alginolyticus 40B]
          Length = 419

 Score =  277 bits (709), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 149/404 (36%), Positives = 228/404 (56%), Gaps = 22/404 (5%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L +RG I Q S+  E+  L SQ   T Y G+D TA SLH GHL  L++L   Q  G
Sbjct: 5   LLQDLQDRGLIAQASDLEEIQTLLSQ-PQTVYCGFDPTAGSLHIGHLVPLIMLKRFQDAG 63

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+ ++L+GG T +IGDPSF+   R +   + +   +  +       + +   K   +M+N
Sbjct: 64  HQAVALIGGATGMIGDPSFKATERSLNSEEIVSGWVNDLSNQIHQLMNHQLTKP-MIMVN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDFVE 186
           N  W+ +I  ID  R++G  FS+N M++ ESV+ RL+R +Q +SF EF+Y +LQ+YDF E
Sbjct: 123 NADWMKAINVIDFFRDVGKHFSINTMVNRESVKQRLQRPDQGISFTEFSYALLQSYDFAE 182

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + Y CRLQ+GG+DQWGNI+ GIDL  R    ++F LT PL+T + GTK GKT  GA+W
Sbjct: 183 LNRRYGCRLQIGGNDQWGNIVSGIDLTRRQNGEQVFGLTLPLITKSDGTKFGKTEGGAVW 242

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM-AKLQGKEIN-EAKKIIAT 304
           L+   +SPY F+Q+W   +DADV  F +  T L   EI  + A+ Q  +   +A++I+A 
Sbjct: 243 LDPSKSSPYAFYQFWLGAEDADVYHFLRYYTFLSCEEIASIEAQDQASQSKPQAQRILAE 302

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHS-----------QHMPTISISKDEVSRGMGLL 353
           E+T  VHG +    A       F  ++               +P+I  ++ +      L+
Sbjct: 303 EMTRFVHGEDGLASAERITQALFSGNVQQLSLGELKQLELDGLPSIESAQQD------LV 356

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
            L++++G A+S   AR H+ +NAI +N   ++ +   +    FD
Sbjct: 357 ELLIESGLASSKRVAREHISNNAISVNGEKVAADNPSLSFPLFD 400


>gi|33519830|ref|NP_878662.1| tyrosyl-tRNA synthetase [Candidatus Blochmannia floridanus]
 gi|81666781|sp|Q7VR52|SYY_BLOFL RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|33504175|emb|CAD83437.1| tyrosyl-tRNA synthetase [Candidatus Blochmannia floridanus]
          Length = 422

 Score =  277 bits (708), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 156/415 (37%), Positives = 235/415 (56%), Gaps = 13/415 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L ERG I QI++ ++L+ + +   +T Y G+D TA SLH GHL  L+ L   QK 
Sbjct: 4   NIIDYLYERGSIAQITDRKKLNAVLNSQPITLYCGFDPTADSLHIGHLAPLLCLKRFQKA 63

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK-TDALM 125
           GH+P+ L+GG T +IGDPSF+D  R++      Q+ I+KIK   + FI   +   + A +
Sbjct: 64  GHRPLILLGGATGLIGDPSFKDSERKLQSFNTTQKWIKKIKLQIALFIDCNSNNASQAHI 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYDF 184
           ++N +W  S+  +  LR+IG FFS+N+M++ + ++ RLK +   +S+ EF+Y ++Q+YDF
Sbjct: 124 IDNYSWFSSMNILTFLRDIGKFFSINKMINKDIIKKRLKNDNYGISYTEFSYNLMQSYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             + K+YD  LQ+GGSDQWGNII GIDL +R+     + LT PLLT  +  K GKT    
Sbjct: 184 AHIYKHYDAILQIGGSDQWGNIISGIDLIKRMYKKNAYGLTVPLLTNFNNIKFGKTEKNT 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           IWL+ E TSPY F+QYW NIDD     F K  T + + +I+   K +    ++A+ I+A 
Sbjct: 244 IWLDPEKTSPYQFYQYWINIDDKSAYHFLKIFTDISVQDINSF-KNRDHSYSQAQYILAE 302

Query: 305 EITTMVHGREEAEKAATAAMECFDMSI------HSQHMPTISISKDEVSRGMGLLTLIVK 358
            +T +VHG+     A   +   F  +I          +    I    +     L   + K
Sbjct: 303 NMTQLVHGKRGLNIAQRISQNLFSYNILKLTLNDFHQLIQDGIPNIILETNTSLQEALTK 362

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK--LSFGKKNH 411
           +  ATS ++AR  +KSNAI IN       K++   QD D   N+   L  GKKN+
Sbjct: 363 SKLATSRSQARYFIKSNAITINAH--KQSKIEYIFQDSDRIYNLYTLLKRGKKNY 415


>gi|125717052|ref|YP_001034185.1| tyrosyl-tRNA synthetase [Streptococcus sanguinis SK36]
 gi|125496969|gb|ABN43635.1| Tyrosyl-tRNA synthetase 1, putative [Streptococcus sanguinis SK36]
 gi|325697737|gb|EGD39621.1| tyrosine--tRNA ligase [Streptococcus sanguinis SK160]
 gi|327459248|gb|EGF05596.1| tyrosine--tRNA ligase [Streptococcus sanguinis SK1057]
          Length = 419

 Score =  277 bits (708), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 142/384 (36%), Positives = 221/384 (57%), Gaps = 11/384 (2%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L ERG + Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  GHKP 
Sbjct: 8   LKERGLVFQTTDEAALRKALEEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAGHKPY 67

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+D  R +   + ++  ++ I+   S F+ +  G   A M+NN  W
Sbjct: 68  ALVGGATGLIGDPSFKDAERSLQTKETVEGWVKSIQNQLSRFLDFEKGDNKAEMVNNYDW 127

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
             SI +ID LR++G +F+VN M+S +SV+SR+  E  +S+ EF Y I+Q YDF  L +N+
Sbjct: 128 FSSISFIDFLRDVGKYFTVNYMMSKDSVKSRI--ETGISYTEFAYQIMQGYDFYILNQNH 185

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
              LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WLN + 
Sbjct: 186 GVTLQIGGSDQWGNMTAGTELLRRKADKTGHVMTVPLITDATGKKFGKSEGNAVWLNPDK 245

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATEITTM 309
           TSPY  +Q+W N+ DAD + F K  T L + EI+ + +      +E  A+K++A E+ ++
Sbjct: 246 TSPYEMYQFWMNVMDADAIRFLKIFTFLSLDEIEEIRQQFEAAPHERLAQKVLAREVVSL 305

Query: 310 VHGREEAEKAATAAMECFDMSIHS-------QHMPTISISKDEVSRGMGLLTLIVKAGFA 362
           VHG+E  ++A     + F  +I +       Q +  +   + +V   + ++ L+V AG  
Sbjct: 306 VHGQEAYQEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVQVEDNLNIVELLVTAGVV 365

Query: 363 TSTNEARRHLKSNAIKINNSIISN 386
            S  +AR  +++ AI +N   I +
Sbjct: 366 NSKRQAREDVQNGAIYLNGERIQD 389


>gi|332364273|gb|EGJ42048.1| tyrosine--tRNA ligase [Streptococcus sanguinis SK1059]
          Length = 419

 Score =  277 bits (708), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 144/384 (37%), Positives = 220/384 (57%), Gaps = 11/384 (2%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L ERG + Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  GHKP 
Sbjct: 8   LKERGLVFQTTDEAALRKALEEGQVSYYSGYDPTADSLHLGHLVAILTSRRLQLAGHKPY 67

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSFRD  R +   + ++  ++ I+   S F+ +  G   A M+NN  W
Sbjct: 68  ALVGGATGLIGDPSFRDAERSLQTKETVEGWVKSIQDQLSRFLDFEKGDNKAEMVNNYDW 127

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
             SI +ID LR++G +F+VN M+S +SV+SR+  E  +S+ EF Y I+Q YDF  L +N+
Sbjct: 128 FSSISFIDFLRDVGKYFTVNYMMSKDSVKSRI--ETGISYTEFAYQIMQGYDFYILNQNH 185

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
           D  LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WLN + 
Sbjct: 186 DVTLQIGGSDQWGNMTAGTELLRRKADKTGHVITVPLITDATGKKFGKSEGNAVWLNPDK 245

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATEITTM 309
           TSPY  +Q+W N+ DAD + F K  T L + EI+ + +      +E  A+KI+A E+ ++
Sbjct: 246 TSPYEMYQFWMNVMDADAIRFLKIFTFLSLDEIEEIRQQFEAAPHERLAQKILAREVVSL 305

Query: 310 VHGREEAEKAATAAMECFDMSIHS-------QHMPTISISKDEVSRGMGLLTLIVKAGFA 362
           VHG+E   +A     + F  +I +       Q +  +   + +    + ++ L+V AG  
Sbjct: 306 VHGQEAYLEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVQAEDNLNIVELLVTAGVV 365

Query: 363 TSTNEARRHLKSNAIKINNSIISN 386
            S  +AR  +++ AI +N   I +
Sbjct: 366 NSKRQAREDVQNGAIYLNGERIQD 389


>gi|56479945|ref|NP_707537.2| tyrosyl-tRNA synthetase [Shigella flexneri 2a str. 301]
 gi|110805610|ref|YP_689130.1| tyrosyl-tRNA synthetase [Shigella flexneri 5 str. 8401]
 gi|81723368|sp|Q83KY0|SYY_SHIFL RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|122366541|sp|Q0T4E0|SYY_SHIF8 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|56383496|gb|AAN43244.2| tyrosine tRNA synthetase [Shigella flexneri 2a str. 301]
 gi|110615158|gb|ABF03825.1| tyrosine tRNA synthetase [Shigella flexneri 5 str. 8401]
          Length = 424

 Score =  277 bits (708), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 157/423 (37%), Positives = 237/423 (56%), Gaps = 15/423 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 4   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +QE ++KI+   + F+ +  G+  A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDCGENSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDF 184
            NN  W  ++  +  LR+IG  FSVN+M++ E+V+ RL RE + +S  EF+Y + Q YD+
Sbjct: 124 ANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNREDEGMSITEFSYNLQQGYDW 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L  +Y   LQ+GGSDQ  NI   IDL  RL    +  L  PL+T   GTK GKT  GA
Sbjct: 184 TCLNTHYYVELQIGGSDQRWNITSEIDLTRRLHQNHVLGLPDPLITNGDGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+ +    K  GK    A+ +
Sbjct: 244 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINALEEEDKNSGK-APRAQYV 302

Query: 302 IATEITTMVHGREEAEKAATAAMEC-FDMSIHS------QHMPTISISKDEVSRGMGLLT 354
           +A ++T +VHG EE  +AA    EC F  S+ +      + +    +   E+ +G  L+ 
Sbjct: 303 LAEQVTRLVHG-EEGLQAAKRITECLFSGSLSALSEADFEQLAQDGVPMVEMEKGADLMQ 361

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +V +    S  +AR+ + SNAI IN    S+ +   K +D        L  GKKN+  C
Sbjct: 362 ALVDSELQPSRGQARKTIASNAITINGEKQSDPEYFFKEEDRLFGRFTLLRRGKKNY--C 419

Query: 415 HLC 417
            +C
Sbjct: 420 LIC 422


>gi|305666159|ref|YP_003862446.1| tyrosyl-tRNA synthetase [Maribacter sp. HTCC2170]
 gi|88707657|gb|EAQ99898.1| tyrosyl-tRNA synthetase [Maribacter sp. HTCC2170]
          Length = 418

 Score =  277 bits (708), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 150/400 (37%), Positives = 224/400 (56%), Gaps = 21/400 (5%)

Query: 34  GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRM 93
           G+ +AY+G D TA SLH GHL  +M+L   Q  GHKP +L+GG T +IGDPS + E R +
Sbjct: 16  GMQSAYVGIDPTADSLHIGHLVGVMMLRHFQLAGHKPYALLGGATGMIGDPSGKSEERNL 75

Query: 94  MRSQEIQENIEKIKGIFSSFIKYGT-GKTDALMLNNETWLCSIKYIDLLREIGSFFSVNR 152
           +    ++ N E ++   S F+ + +  +  A+++NN  W+    ++D +R+IG   +VN 
Sbjct: 76  LDEATLRLNQEALRAQLSRFLDFDSEDENAAILVNNYDWMKDFSFLDFIRDIGKHITVNY 135

Query: 153 MLSFESVRSRLKRE--QSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGI 210
           M++ +SV+ RL  E    +SF EF Y ++Q YDF+ L +N +C LQMGGSDQWGNI  G 
Sbjct: 136 MMAKDSVKKRLSAESKDGMSFTEFTYQLVQGYDFLHLYQNNNCTLQMGGSDQWGNITTGT 195

Query: 211 DLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVV 270
           +L  R+   K +ALT PL+T A GTK GKT  G +WL+   TSPY F+QYW N  D D  
Sbjct: 196 ELIRRIGGGKGYALTCPLITKADGTKFGKTEGGNVWLDAHRTSPYKFYQYWLNTSDTDAE 255

Query: 271 SFAKRLTTLPMSEIDRM--AKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFD 328
            + K  T L   EID +     +   +   +K +A EIT MVH +E+ + A  A+   F 
Sbjct: 256 KYIKIFTFLTKEEIDGLISEHQESPHLRVLQKRLADEITVMVHSQEDLDNAKKASNILFG 315

Query: 329 MSIHS--------------QHMPTISISKDEVSRGMGLL-TLIVKAGFATSTNEARRHLK 373
            S                   +P  +ISK E+  G+ ++  L  K GF +S  EARR LK
Sbjct: 316 RSTSEDLKTLDEKTFLDVFDGVPQANISKSELESGLDMIGALAAKTGFLSSNGEARRELK 375

Query: 374 SNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            N+I +N   + ++ + I   D  +   + L  G++N+ +
Sbjct: 376 QNSISVNKEKVKDDYM-ITSTDLINDRFVLLQKGRRNYFV 414


>gi|262091789|gb|ACY25377.1| tyrosyl-tRNA synthetase [uncultured actinobacterium]
          Length = 421

 Score =  277 bits (708), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 156/417 (37%), Positives = 235/417 (56%), Gaps = 19/417 (4%)

Query: 15  RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLM 74
           RG + Q ++ + L +   +   T Y+G+D TA SLHAG+L  L++L   Q  GH PI+L+
Sbjct: 10  RGLLAQSTDEKAL-LEALKKPTTLYVGFDPTAPSLHAGNLVVLLVLRRFQLAGHNPIALV 68

Query: 75  GGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCS 134
           GG T ++GDPS ++E R +  S+ ++  + +I+   S+F+ +   K  A ++NN  W   
Sbjct: 69  GGATGLVGDPSGKNEERTLNSSEIVEAWVNRIRQQVSAFLDFDAPKNPAQVVNNLDWTSP 128

Query: 135 IKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCR 194
           +  I+ LR+IG  FSVN+MLS +SV +RL+    +S+ EF+Y +LQ+YDF+EL +  +C 
Sbjct: 129 LSAIEFLRDIGKHFSVNQMLSKDSVSARLEG-GGISYTEFSYQVLQSYDFLELYRRNNCT 187

Query: 195 LQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSP 254
           LQ+GGSDQWGNI+ G+DL  R++     ALT PLL  A GTK GKT  G++WL+ EMTSP
Sbjct: 188 LQVGGSDQWGNIVAGLDLIRRVEQGSGHALTVPLLMKADGTKFGKTAGGSVWLDPEMTSP 247

Query: 255 YNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE--INEAKKIIATEITTMVHG 312
           Y F+Q+W N DD DV++F K  +     EI  + K   +   + EA + +A E+T++VH 
Sbjct: 248 YAFFQFWLNSDDKDVINFLKVFSFKSHEEITALEKSHNENPGLREAHRALARELTSLVHS 307

Query: 313 REEAEKAATAAMECFDMSIHSQ-----------HMPTISI-SKDEVSRGMGLLTLIVKAG 360
            E  ++   AA   F     S+            +P  ++ SKDE+   + LL      G
Sbjct: 308 EETTQRVEAAARALFGQGELSELDEVTLASALAELPRTTVSSKDEIPTWVDLL---AATG 364

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
              S + ARR +K     +NN  IS E  +    DF       L  GK++     L 
Sbjct: 365 VVDSKSAARRIVKEGGGYLNNEKISGEDFRPSKSDFLCGKYAVLRKGKRDLAAVELV 421


>gi|312880689|ref|ZP_07740489.1| tyrosyl-tRNA synthetase [Aminomonas paucivorans DSM 12260]
 gi|310783980|gb|EFQ24378.1| tyrosyl-tRNA synthetase [Aminomonas paucivorans DSM 12260]
          Length = 427

 Score =  276 bits (707), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 156/424 (36%), Positives = 243/424 (57%), Gaps = 18/424 (4%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           + + L +LS RG I   S P EL  L  + +VT Y+G+D +A SLH G++  +M L WLQ
Sbjct: 4   RKNALEVLSRRGLIEWCSQPEELSSLFEREMVTGYVGFDPSADSLHVGNMVPIMGLAWLQ 63

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + GH+P++L+GGGT +IGDPS + + R+++  +++  N+  I+G    F+ +      AL
Sbjct: 64  RLGHRPMALVGGGTGLIGDPSGKTKERQLLSEEQVVHNMGCIRGQLERFLDFDRTPNAAL 123

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK-REQSLSFLEFNYMILQAYD 183
           ++NN  WL    YI+ LR+ G +FSVN M++ E +RSRL+  E+S+++ E +YM+LQA+D
Sbjct: 124 LVNNYDWLKKQGYIEFLRDTGKYFSVNYMINREYIRSRLEDPEKSITYTELSYMLLQAFD 183

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F  L +   C LQMGG+DQ GN+I GIDL  + +  + +A T PLL T+SG K GK+  G
Sbjct: 184 FHHLYRTQGCLLQMGGNDQQGNLIAGIDLIRKKEGVQAYAATFPLLLTSSGQKFGKSEQG 243

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKKI 301
           A++L+ E TSPY F+Q+W N +DAD+    +  T     EI  +   Q    E    +K 
Sbjct: 244 AVYLSPERTSPYRFYQFWINTEDADLPKLLRMYTFWEDEEIGALLAEQAAAPERRTGQKR 303

Query: 302 IATEITTMVHGREEAEKAATAA---MECFDMS-IHSQ-------HMPTISISKDEVSRGM 350
           +A + T  VHG E A++ A A+      FD+S + +Q        +PT  +  D + R  
Sbjct: 304 LAWDFTCRVHGEEVAKRVARASELLFGEFDLSRLDAQVLETLVDEIPTAPLPGD-LPR-- 360

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            L  L+ ++G   S  EA+R LK   +  N   +  E   ++  +      + L  GKK 
Sbjct: 361 SLADLLAESGACPSKGEAKRLLKGGGVSCNGRKVEREDAAVEPSELLFDRYLFLRLGKKR 420

Query: 411 -HII 413
            H++
Sbjct: 421 FHLL 424


>gi|333028038|ref|ZP_08456102.1| putative tyrosyl-tRNA synthetase [Streptomyces sp. Tu6071]
 gi|332747890|gb|EGJ78331.1| putative tyrosyl-tRNA synthetase [Streptomyces sp. Tu6071]
          Length = 451

 Score =  276 bits (707), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 148/422 (35%), Positives = 234/422 (55%), Gaps = 11/422 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +D +  L  RG   Q ++   L    + G VT Y G+D TA+SLH GHL Q++ +  LQ+
Sbjct: 31  TDIVDDLKWRGLFAQSTDEEALRKALANGPVTFYCGFDPTAASLHVGHLVQVLTVRRLQR 90

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH P++L+GG T  IGDP    E R +     I E + +++     F+ +  G + A M
Sbjct: 91  AGHHPLALVGGATGQIGDPRPTAE-RTLNDPATIAEWVNRLRAQIEPFLDF-DGPSAARM 148

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  W   +  I  LR+IG  F VN+ML+ ESV  RL+ EQ +S+ EF+Y +LQA DF+
Sbjct: 149 VNNLDWTSGLSAIAFLRDIGKHFRVNKMLTKESVARRLESEQGISYTEFSYQLLQAMDFL 208

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT-PKLFALTSPLLTTASGTKMGKTLSGA 244
           EL + + C LQ GGSDQWGN+  G+DL  R++   ++ AL +PL+T A GTK GK+ SGA
Sbjct: 209 ELYRRHGCVLQQGGSDQWGNLTAGVDLIHRVEPEAQVHALATPLMTKADGTKFGKSESGA 268

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINEAKKII 302
           +WL+  MT+PY F+Q+W N+DD D+  + + L+  P +E++ +  +  +  +   A++ +
Sbjct: 269 VWLDPAMTTPYAFYQFWLNVDDRDISRYTRILSFRPRAELEELEAVTAERPQARTAQRAL 328

Query: 303 ATEITTMVHGREEAEKAATAAMECFDM-SIHSQHMPTISISKDEVSRG-----MGLLTLI 356
           A E+TT+VHG  +      A+   F    +      T++ +  E+ R        ++ L+
Sbjct: 329 AEELTTLVHGEAQTRAVVAASRALFGQGELAELDEATLAAALGELPRASVAEPASVVDLL 388

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V+ G   S + ARR +K     +NN+ ++ E       +      + L  GKKN     +
Sbjct: 389 VETGLVASKSAARRTIKEGGAYVNNAKVTAEDAVPAASELLHGRWLVLRRGKKNLAAVEV 448

Query: 417 CG 418
            G
Sbjct: 449 TG 450


>gi|298206911|ref|YP_003715090.1| tyrosyl-tRNA synthetase [Croceibacter atlanticus HTCC2559]
 gi|83849545|gb|EAP87413.1| tyrosyl-tRNA synthetase [Croceibacter atlanticus HTCC2559]
          Length = 431

 Score =  276 bits (707), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 152/433 (35%), Positives = 237/433 (54%), Gaps = 23/433 (5%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           K++F++ ++ RG +H +    E  +L  +    AYIG+D TA SLH G L Q+++L   Q
Sbjct: 2   KTNFVAEMTWRGMLHDVMPGTEEQLL--KEPTAAYIGFDPTADSLHIGSLVQIVILMHYQ 59

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG-TGKTDA 123
           + GH PI+L+GG T +IGDPS +   R ++  + + +N+  IK   S F+ +    +  A
Sbjct: 60  RAGHIPIALVGGATGMIGDPSGKSAERNLLDEEALAKNVAGIKEQLSRFLDFSENSENKA 119

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQS--LSFLEFNYMILQA 181
            ++NN  W+    +I+  R+IG   +VN M++ +SV+ RL  E +  +SF EF Y + Q 
Sbjct: 120 ELVNNYDWMKDFSFIEFARDIGKHITVNYMMAKDSVKKRLSSESTVGMSFTEFTYQLFQG 179

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
           YDF+ L +  +C LQ+GGSDQWGNI  G +L  R+   K +A+TSPLLT A GTK GKT 
Sbjct: 180 YDFLHLYREKNCLLQLGGSDQWGNITTGTELVRRVAGGKAYAMTSPLLTKADGTKFGKTE 239

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA--KLQGKEINEAK 299
            G +WL+K  TSPY F+QYW N  D D  +F K  T L   EI  +     +   +   +
Sbjct: 240 GGNVWLDKNRTSPYKFYQYWVNATDEDAENFIKIFTFLSQEEISELVLKHNEAPHLRLLQ 299

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDE 345
           K +A  +T MVHG+E+ + A  A+   F  +  +              + +    ISK +
Sbjct: 300 KTLAEHVTKMVHGQEDLDNAIKASQVLFSKTFKNDISQLDEATFLDVFEGVSQTEISKAK 359

Query: 346 VSRGMGLL-TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           +  G+ ++  L  +  F  S  EARR LK+N++ +N   ++ E   +   D  +   + L
Sbjct: 360 LEEGLDMIAALSAETNFLKSNGEARRALKANSVAVNKEKVT-EAYTLTTDDIINDNYVIL 418

Query: 405 SFGKKNHIICHLC 417
           + GKKN  I  + 
Sbjct: 419 NVGKKNTYILKVS 431


>gi|269793163|ref|YP_003318067.1| tyrosyl-tRNA synthetase [Thermanaerovibrio acidaminovorans DSM
           6589]
 gi|269100798|gb|ACZ19785.1| tyrosyl-tRNA synthetase [Thermanaerovibrio acidaminovorans DSM
           6589]
          Length = 425

 Score =  276 bits (706), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 147/391 (37%), Positives = 229/391 (58%), Gaps = 11/391 (2%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           + +   +LS RG +   S P EL  L +  +VT Y+G+D +A SLH G++  +M L WLQ
Sbjct: 3   RDNPFEVLSRRGLVEWCSAPEELSQLFASEMVTGYVGFDPSADSLHVGNMVPIMGLAWLQ 62

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + GH+P++++GGGT +IGDPS + + R ++   ++  N+E I+   S F+ +      A+
Sbjct: 63  RLGHRPLAIVGGGTGLIGDPSGKSKERPLLTHDQVVHNMECIREQLSLFLDFDRTPNGAV 122

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK-REQSLSFLEFNYMILQAYD 183
           +LNN  WL     I  LR+   FF+VN M+S E VRSRL+  E+S+++ E +YM+LQA+D
Sbjct: 123 ILNNYDWLKDQSLIGFLRDTAKFFTVNYMISREYVRSRLEDPEKSITYTEMSYMLLQAFD 182

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F  L + Y C+LQMGG+DQ GNI+ G+DL  + +  + F  T PLL T++G K GK+  G
Sbjct: 183 FWHLYRTYGCKLQMGGNDQQGNILAGVDLIRKKEGGQAFGFTFPLLLTSTGQKFGKSEEG 242

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKI 301
           A++L+ + TSPY F+Q+W N++D  +    +  T L    ID +    L   E   A++ 
Sbjct: 243 AVYLSPKRTSPYKFYQFWMNVEDQALGKLFRMYTFLEEERIDEIVSRHLASPENRSAQRE 302

Query: 302 IATEITTMVHGREEAEKAATAAMECF-DMSIHSQHMPTISISKDEV--SR-----GMGLL 353
           +A E+T+ VHG + A + A A+   F D         ++SI + EV  SR     G  ++
Sbjct: 303 MAMEMTSRVHGEQVARRVAKASEMLFGDYDFRDAQEESLSILEGEVPTSRLGLNCGETVV 362

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSII 384
            ++V AG   S  EARR LK   + +N   +
Sbjct: 363 DVMVSAGICPSKGEARRLLKGGGVYLNGQRV 393


>gi|229543517|ref|ZP_04432577.1| tyrosyl-tRNA synthetase [Bacillus coagulans 36D1]
 gi|229327937|gb|EEN93612.1| tyrosyl-tRNA synthetase [Bacillus coagulans 36D1]
          Length = 419

 Score =  276 bits (706), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 152/403 (37%), Positives = 228/403 (56%), Gaps = 20/403 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D L  L  RG I+Q ++   L  L     VT Y G D T  S+H GHL   + L   Q+ 
Sbjct: 2   DLLEDLKWRGIIYQQTDEEGLAELLQNRKVTLYCGIDPTGDSMHIGHLLPYLTLRRFQQA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI ++GG T +IGDPS + E R+++  +++++N E +K     F  +  G++ A+M+
Sbjct: 62  GHRPIVVLGGATGMIGDPSGKKEERKLLTVEKVKQNGEALKKQLERFFDF-DGESGAIMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W  S+  +  LR+ G    +N ML+ +++ SRL  E  +SF EF Y ILQA D+  
Sbjct: 121 NNYDWHGSMDLVTFLRDYGKHIGINYMLAKDTIASRL--ETGISFTEFTYTILQAVDYFN 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSGA 244
           L K Y+CRLQ+GGSDQWGNI  G++L  +L+    K F LT PL+T A GTK GKT SGA
Sbjct: 179 LYKQYNCRLQIGGSDQWGNITSGLELIRKLEPEGEKAFGLTIPLVTKADGTKFGKTESGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE--INEAKKII 302
           +WL+ E TSPY F+Q+W N  D DVV + K  T LP  EI+ + K    E  + +A+K +
Sbjct: 239 VWLDAEKTSPYEFYQFWVNTADLDVVKYLKYFTFLPKEEIEELEKSVETEPHLRKAQKAL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECF----------DMSIHSQHMPTISISKDEVSRGMGL 352
           A E+T ++HG E  ++A       F          +M    + +P+  +  +E  +   L
Sbjct: 299 AAEMTKLIHGEEALQQALNITEALFSGNVKKLSAEEMKQGFKDVPSFQLESEEQKQ---L 355

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           + L+V A  + S  +AR  +++ AI +N   I++    +  QD
Sbjct: 356 VELLVAAKISPSKRQAREDIQNGAIYVNGDRITDLGYALGEQD 398


>gi|295096027|emb|CBK85117.1| tyrosyl-tRNA synthetase [Enterobacter cloacae subsp. cloacae NCTC
           9394]
          Length = 380

 Score =  276 bits (706), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 141/325 (43%), Positives = 199/325 (61%), Gaps = 7/325 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q 
Sbjct: 8   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQM 67

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++     +QE ++KI+   + F+ +  G   A+ 
Sbjct: 68  AGHKPVALVGGATGLIGDPSFKAAERKLNTEDTVQEWVDKIRKQVAPFLDFDCGDNSAIA 127

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDF 184
            NN  W   +  +  LR+IG  FSVN+M++ E+V+ RL R+ Q +SF EF+Y +LQ YDF
Sbjct: 128 ANNYDWFGGMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDQGISFTEFSYNLLQGYDF 187

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K +   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 188 ACLNKLHGVSLQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 247

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+ +    K  GK    A+ +
Sbjct: 248 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMDIEEINALEEEDKNSGK-APRAQYV 306

Query: 302 IATEITTMVHGRE--EAEKAATAAM 324
           +A E+T +VHG E   A K  TA++
Sbjct: 307 LADEVTKLVHGEEGLAAAKRITASL 331


>gi|256820458|ref|YP_003141737.1| tyrosyl-tRNA synthetase [Capnocytophaga ochracea DSM 7271]
 gi|256582041|gb|ACU93176.1| tyrosyl-tRNA synthetase [Capnocytophaga ochracea DSM 7271]
          Length = 431

 Score =  276 bits (706), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 156/429 (36%), Positives = 236/429 (55%), Gaps = 24/429 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG I  I    E  ++  +G+  AY+G+D TA SLH G+L  +M+L   Q  
Sbjct: 3   NFIEELRWRGMIQDIMPETEQHLM--EGLRAAYVGFDPTADSLHIGNLVSVMMLRHFQNC 60

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD-ALM 125
           GHKP +L+GG T +IGDPS +   R ++  + +  NI  IK   + F+ + +  ++ A +
Sbjct: 61  GHKPYALVGGATGMIGDPSGKSVERNLLTEEVLAHNIAGIKKQLAKFLDFESQASNRAEL 120

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQS---LSFLEFNYMILQAY 182
           +NN  W+    ++  +R+IG   +VN M++ +SV+ R    ++   +SF EF+Y +LQ Y
Sbjct: 121 VNNYDWMKEFSFLSFIRDIGKHITVNYMMAKDSVKKRFDPNENTDGMSFTEFSYQLLQGY 180

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DF+ L +  +  LQMGGSDQWGNI  G +L  R+   K +ALT PL+T A GTK GK+  
Sbjct: 181 DFLHLYREKNLTLQMGGSDQWGNITTGTELIRRIAGGKAYALTCPLITKADGTKFGKSEG 240

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKK 300
           G +WL+ E TSPY F+QYW N  D D   + K  T L   EI+ +     +   +   + 
Sbjct: 241 GNVWLDPEKTSPYKFYQYWINTSDTDAERYIKIFTMLSKEEINSLIAQHTEAPHLRVLQN 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDEV 346
            +A E+T +VHGREE EKA  A+   F  S  +                +P   IS  ++
Sbjct: 301 KLAEELTLLVHGREELEKAQKASQILFGNSTSADLRTLDEKTFLEVFDGVPQSEISATDI 360

Query: 347 SRGMGLLTLI-VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLS 405
           + G+ ++ ++  K GF +S +EARR LK N+I +N   +  E  QI  +D      I L 
Sbjct: 361 AGGLDMIAILSAKTGFISSNSEARRALKENSISVNKEKVG-EDYQIGEKDLVDGKFILLQ 419

Query: 406 FGKKNHIIC 414
            GKKN+ I 
Sbjct: 420 RGKKNYFIV 428


>gi|95929912|ref|ZP_01312653.1| tyrosyl-tRNA synthetase [Desulfuromonas acetoxidans DSM 684]
 gi|95134208|gb|EAT15866.1| tyrosyl-tRNA synthetase [Desulfuromonas acetoxidans DSM 684]
          Length = 430

 Score =  276 bits (706), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 149/427 (34%), Positives = 241/427 (56%), Gaps = 22/427 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L+ RG IH I    E  +   + + +AY+G D TA SLH GHL  +M+L   Q  
Sbjct: 2   NFVQELTWRGMIHDIMPGTEEQL--QKEMTSAYVGIDPTADSLHIGHLVSVMMLKHFQLA 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL-M 125
           GHKPI+L+GG T +IGDPS +   R ++  + ++ N + IK   + F+ + +   +A  +
Sbjct: 60  GHKPIALVGGATGMIGDPSGKSAERNLLDEKTLRHNEDCIKKQLAKFLDFDSDAANAAEL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ--SLSFLEFNYMILQAYD 183
           +NN  W+    +++ +R+IG   +VN M++ +SV+ RL  E    LSF EF Y ++Q  D
Sbjct: 120 VNNYDWMKEFSFLEFIRDIGKHITVNYMMAKDSVKKRLSDESKVGLSFTEFTYQLVQGTD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ L +  +C+LQMGGSDQWGNI  G +L  R ++ + FALT PL+T A G K GKT SG
Sbjct: 180 FLHLYREKNCKLQMGGSDQWGNITTGTELVRRKESGEAFALTCPLITKADGGKFGKTESG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEA--KKI 301
            +WL+ ++T+PY F+Q+W N+ DAD   + K  T L   E+  + K Q    +E   +K 
Sbjct: 240 NVWLDPKLTTPYKFYQFWLNVSDADAEKYIKIFTLLNKDEVAALVKEQEAAPHERPLQKR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDEVS 347
           +A E+T MVH  EE +KA  A+   F  +                 + +PT  ++++++ 
Sbjct: 300 LAREVTCMVHSEEEYDKAVEASQILFGKATTESLARLDKETFLSVFEGVPTFDVARNKID 359

Query: 348 RGMGLLTLIVKAGFA-TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+ ++ L+     A  S  E RR +K N + +N + +++++  +   D  +   I +  
Sbjct: 360 NGVPVVELLAAETAAFPSKGELRRTIKGNGLSLNKAKVTDQEYLVTANDLINGSYILVQK 419

Query: 407 GKKNHII 413
           GKKN+ I
Sbjct: 420 GKKNYYI 426


>gi|238897878|ref|YP_002923557.1| tyrosine tRNA synthetase [Candidatus Hamiltonella defensa 5AT
           (Acyrthosiphon pisum)]
 gi|259517002|sp|C4K4B6|SYY_HAMD5 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|229465635|gb|ACQ67409.1| tyrosine tRNA synthetase [Candidatus Hamiltonella defensa 5AT
           (Acyrthosiphon pisum)]
          Length = 424

 Score =  276 bits (706), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 149/384 (38%), Positives = 217/384 (56%), Gaps = 9/384 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           ++ +  L +RG I Q+++   L     QG ++ Y G+D TA SLH GHL  L+ L   Q 
Sbjct: 4   NNLIEQLEQRGLIAQVTDKTRLSERLYQGQISLYCGFDPTADSLHLGHLVPLLCLKRFQL 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKPI L+GG T +IGDPSF+   R++     + + + KI+     F+ +  G   A +
Sbjct: 64  VGHKPIILVGGATGLIGDPSFKAGERKLNDIDTVHQWVNKIREQVEPFLDFDCGNHSATI 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQS-LSFLEFNYMILQAYDF 184
            NN  W   I  +  LR+IG  FSVN+M++ E+V+ RL R  S +SF EF+Y +LQ+YDF
Sbjct: 124 ENNHNWFSHINVLTFLRDIGKHFSVNQMMNKEAVKQRLSRTDSGISFTEFSYNLLQSYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L KN+   LQ+GGSDQWGNI  GIDL  RL    ++ LT PL+T A G+K GKT    
Sbjct: 184 AYLNKNHKVELQIGGSDQWGNITSGIDLTHRLNRRSVYGLTVPLITKADGSKFGKTEGNT 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINEAKKII 302
           IWL+ + TSPY F+Q+W N  DADV  F K  T + ++ ID + +   K  +  +A+ ++
Sbjct: 244 IWLDAKKTSPYQFYQFWLNTADADVYRFLKLFTFIDLNAIDALEEQDKKNDKAPQAQYVL 303

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS-ISKD-----EVSRGMGLLTLI 356
           A EIT MVHG+E    A       F  + H       S +++D      +     L   +
Sbjct: 304 ANEITEMVHGKEGLSAAQRITASLFTGNPHDMREEDFSQLAQDGIPIVRLETDAELQKAL 363

Query: 357 VKAGFATSTNEARRHLKSNAIKIN 380
           V A  A S ++AR  ++S++I +N
Sbjct: 364 VSAQLAPSRSQARTLIQSSSISVN 387


>gi|332358433|gb|EGJ36258.1| tyrosine--tRNA ligase [Streptococcus sanguinis SK49]
          Length = 419

 Score =  276 bits (706), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 142/384 (36%), Positives = 221/384 (57%), Gaps = 11/384 (2%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L ERG + Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  GHKP 
Sbjct: 8   LKERGLVFQTTDEAALRKALEEGQVSYYSGYDPTADSLHLGHLVAILTSRRLQLAGHKPY 67

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+D  R +   + ++  ++ I+   S F+ +  G   A M+NN  W
Sbjct: 68  ALVGGATGLIGDPSFKDAERSLQTKETVEGWVKSIQDQLSRFLDFEKGDNKAEMVNNYDW 127

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
             SI +ID LR++G +F+VN M+S +SV+SR+  E  +S+ EF Y I+Q YDF  L +N+
Sbjct: 128 FSSISFIDFLRDVGKYFTVNYMMSKDSVKSRI--ETGISYTEFAYQIMQGYDFYILNQNH 185

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
              LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WLN + 
Sbjct: 186 GVTLQIGGSDQWGNMTAGTELLRRKADKTGHVMTVPLITDATGKKFGKSEGNAVWLNPDK 245

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATEITTM 309
           TSPY  +Q+W N+ DAD + F K  T L + EI+ + +      +E  A+K++A E+ ++
Sbjct: 246 TSPYEMYQFWMNVMDADAIRFLKIFTFLSLDEIEEIRQQFEAAPHERLAQKVLAREVVSL 305

Query: 310 VHGREEAEKAATAAMECFDMSIHS-------QHMPTISISKDEVSRGMGLLTLIVKAGFA 362
           VHG+E  ++A     + F  +I +       Q +  +   + +V   + ++ L+V AG  
Sbjct: 306 VHGQEAYQEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVQVEDNLNIVELLVTAGVV 365

Query: 363 TSTNEARRHLKSNAIKINNSIISN 386
            S  +AR  +++ AI +N   I +
Sbjct: 366 NSKRQAREDVQNGAIYLNGERIQD 389


>gi|329117271|ref|ZP_08245988.1| tyrosine--tRNA ligase [Streptococcus parauberis NCFD 2020]
 gi|326907676|gb|EGE54590.1| tyrosine--tRNA ligase [Streptococcus parauberis NCFD 2020]
          Length = 418

 Score =  276 bits (706), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 147/398 (36%), Positives = 223/398 (56%), Gaps = 19/398 (4%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG + Q ++   L    ++G V+ Y GYD TA SLH GHL  ++    LQ  GHKP 
Sbjct: 7   LKARGLVFQTTDEEALVKALTEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAGHKPY 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+D  R +   + + E  +KIKG  S+F+ +  G   A ++NN  W
Sbjct: 67  ALVGGATGLIGDPSFKDAERSLQTKETVLEWSDKIKGQLSNFLDFENGDNKAELVNNYDW 126

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
              I +ID LR++G +F+VN M+S +SV+ R+  E  +S+ EF Y I+Q YDF EL   +
Sbjct: 127 FSQISFIDFLRDVGKYFTVNYMMSKDSVKKRI--ETGISYTEFAYQIMQGYDFYELNAKH 184

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
           +  LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   AIWL+ + 
Sbjct: 185 NVTLQIGGSDQWGNMTAGTELLRRKSDKTGHVMTVPLITDATGKKFGKSEGNAIWLDADK 244

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATEITTM 309
           TSPY  +Q+W N+ D D V F K  T L + EI+ + K      +E  A+K +A E+ T+
Sbjct: 245 TSPYEMYQFWLNVMDDDAVRFLKIFTFLSLDEINAIEKTFDAARHERLAQKTLACEVVTL 304

Query: 310 VHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIVKA 359
           VHG+   ++A     + F  +I             ++P   +S +     M ++ ++V A
Sbjct: 305 VHGKAAYDQAVKITEQLFAGNIKELSASELKQGLSNVPNYHVSSEA---NMNIVEMLVTA 361

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
           G + S  +AR  + + AI +N   + +  L  +LQD D
Sbjct: 362 GISPSKRQAREDVSNGAIYVNGERLQD--LDYQLQDED 397


>gi|300772115|ref|ZP_07081985.1| tyrosine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33861]
 gi|300760418|gb|EFK57244.1| tyrosine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33861]
          Length = 427

 Score =  276 bits (706), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 147/431 (34%), Positives = 228/431 (52%), Gaps = 31/431 (7%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG +  I    E   L ++  V+ YIG+D T  SLH GHLTQ+M L   Q  
Sbjct: 2   NFVEELRWRGMLQDIMPGTEE--LLNKEKVSGYIGFDPTGDSLHVGHLTQIMTLIHFQNA 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP++L+GG T +IGDPSF+   R ++  + +  N+  +K   S F+ +G G+ DA M+
Sbjct: 60  GHKPVALVGGATGMIGDPSFKSAERNLLDEETLNHNVASLKHQLSKFLTFGEGELDAKMV 119

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W    K++D +R+IG   +VN M++ +SV+ RL+ E  LSF EF+Y ++Q YDF  
Sbjct: 120 NNYDWFKDFKFLDFIRDIGKLITVNYMMAKDSVKKRLEGENGLSFTEFSYQLIQGYDFYY 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L K+++C++QMGGSDQWGNI+ G +   R      FALT+ L+  + G K GKT SGA+W
Sbjct: 180 LWKHHNCKIQMGGSDQWGNIVTGTEFIRRQDQGSAFALTTQLIKKSDGQKFGKTESGAVW 239

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKKIIAT 304
           L+ + T+PY ++Q+W N  D D  ++ +  T  P  EI+ +             +K +A 
Sbjct: 240 LDAKKTTPYKYYQFWLNATDDDAKNWIRIFTLKPKEEIEAIIAEHDAAPHTRTVQKALAK 299

Query: 305 EITTMVHGREEAEKA--------------------ATAAMECFDMSIHSQHMPTISISKD 344
           +IT   H  ++ E A                      A ++ FD       +P   ISK 
Sbjct: 300 DITIRTHSEKDYETALKTSEFLFGNGSLDFLGDLEHNAVLDVFD------GVPQFKISKS 353

Query: 345 EVSRGMGLLTLIV-KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
           E++ G+ +L L+  K     S  EAR+  +   + +N   +S        ++  +   I 
Sbjct: 354 ELAEGINILDLLATKTQIFPSKGEARKMTEGGGVSVNKEKVSGTDATFTTENLINNKYII 413

Query: 404 LSFGKKNHIIC 414
              GKKN+ + 
Sbjct: 414 AQRGKKNYYLI 424


>gi|323353636|ref|ZP_08088169.1| tyrosine--tRNA ligase [Streptococcus sanguinis VMC66]
 gi|322121582|gb|EFX93345.1| tyrosine--tRNA ligase [Streptococcus sanguinis VMC66]
 gi|324992322|gb|EGC24244.1| tyrosine--tRNA ligase [Streptococcus sanguinis SK405]
          Length = 419

 Score =  276 bits (706), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 141/384 (36%), Positives = 220/384 (57%), Gaps = 11/384 (2%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L ERG + Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  GHKP 
Sbjct: 8   LKERGLVFQTTDEAALRKALEEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAGHKPY 67

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+D  R +   + ++  ++ I+   S F+ +  G   A M+NN  W
Sbjct: 68  ALVGGATGLIGDPSFKDAERSLQTKETVEGWVKSIQDQLSRFLDFEKGDNKAEMVNNYDW 127

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
             SI +ID LR++G +F+VN M+S +SV+SR+  E  +S+ EF Y I+Q YDF  L +N+
Sbjct: 128 FSSISFIDFLRDVGKYFTVNYMMSKDSVKSRI--ETGISYTEFAYQIMQGYDFYTLNQNH 185

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
              LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WLN + 
Sbjct: 186 GVTLQIGGSDQWGNMTAGTELLRRKADKTGHVITVPLITDATGKKFGKSEGNAVWLNPDK 245

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATEITTM 309
           TSPY  +Q+W N+ DAD + F K  T L + EI+ + +      +E  A+K++A E+ ++
Sbjct: 246 TSPYEMYQFWMNVMDADAIRFLKIFTFLSLDEIEEIRQQFESAPHERLAQKVLAREVVSL 305

Query: 310 VHGREEAEKAATAAMECFDMSIHS-------QHMPTISISKDEVSRGMGLLTLIVKAGFA 362
           VHG+E  ++A     + F  +I +       Q +  +   + +    + ++ L+V AG  
Sbjct: 306 VHGQEAYQEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVQAEDNLNIVELLVTAGVV 365

Query: 363 TSTNEARRHLKSNAIKINNSIISN 386
            S  +AR  +++ AI +N   I +
Sbjct: 366 NSKRQAREDVQNGAIYLNGERIQD 389


>gi|262283750|ref|ZP_06061514.1| tyrosyl-tRNA synthetase [Streptococcus sp. 2_1_36FAA]
 gi|262260596|gb|EEY79298.1| tyrosyl-tRNA synthetase [Streptococcus sp. 2_1_36FAA]
          Length = 418

 Score =  276 bits (706), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 150/414 (36%), Positives = 228/414 (55%), Gaps = 15/414 (3%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L ERG I Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  GHKP 
Sbjct: 7   LKERGLIFQTTDEEALRQELEEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAGHKPY 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+D  R +   + ++  ++ I+G  +  + +  G+  A M+NN  W
Sbjct: 67  ALVGGATGLIGDPSFKDAERSLQTKETVEGWVKSIQGQLAGLLDFENGQNKAEMVNNYDW 126

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
              I +ID LR++G +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF  L + +
Sbjct: 127 FSDISFIDFLRDVGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFFILNQKH 184

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
           +  LQ+GGSDQWGN+  G +L  R        +T PL+T ASG K GK+   A+WLN + 
Sbjct: 185 NVTLQIGGSDQWGNMTAGTELLRRKADKTGHVITVPLITDASGKKFGKSEGNAVWLNADK 244

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATEITTM 309
           TSPY  +Q+W N+ D D V F K  T L + EI+ + K      +E  A+KI+A E+ T+
Sbjct: 245 TSPYEMYQFWMNVMDDDAVRFLKIFTFLSLDEIEEIRKQFEAAPHERLAQKILAREVVTL 304

Query: 310 VHGREEAEKAATAAMECFDMSIHS-------QHMPTISISKDEVSRGMGLLTLIVKAGFA 362
           VHG +  ++A     + F  +I +       Q +  +   + +    + ++ L+V AG  
Sbjct: 305 VHGEKAYQEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVQAEDNLNIVDLLVTAGVV 364

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN--IKLSFGKKNHIIC 414
            S  +AR  +++ AI +N   I +  L   L D D   N    +  GKK + + 
Sbjct: 365 NSKRQAREDVQNGAIYVNGDRIQD--LDYTLSDADKLENELTVIRRGKKKYFVL 416


>gi|294789437|ref|ZP_06754674.1| tyrosine--tRNA ligase [Simonsiella muelleri ATCC 29453]
 gi|294482650|gb|EFG30340.1| tyrosine--tRNA ligase [Simonsiella muelleri ATCC 29453]
          Length = 432

 Score =  276 bits (705), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 151/391 (38%), Positives = 228/391 (58%), Gaps = 22/391 (5%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L+ L  RG I Q ++ +EL  L     +  Y G+D TA SLH GHL  +++L   Q  G
Sbjct: 4   LLADLQARGLISQTTDIQELSNLLDSEKIALYCGFDPTADSLHIGHLLPILVLRRFQDAG 63

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H P++L+GG T +IGDPSF+   R +   + +   +E I+     F+K+  G+  A+M N
Sbjct: 64  HTPVALVGGATGMIGDPSFKAVERSLNTPETVAGWVESIRNQLKPFLKF-DGENPAIMEN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDFVE 186
           N  W  ++  +D LR+IG  FSVN ML+ E+V+ R++RE Q +SF EF Y +LQ YDF E
Sbjct: 123 NANWFGTMNCLDFLRDIGKHFSVNAMLAKEAVKQRIEREDQGISFTEFAYALLQGYDFAE 182

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L K ++ +L++GGSDQWGNI  G +   RL    +  +T PL+T A GTK GKT  GA+W
Sbjct: 183 LNKRHNVKLEIGGSDQWGNITWGTETTRRLNQQSVHGMTLPLVTKADGTKFGKTEGGAVW 242

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKIIA 303
           L+   TSPY F+Q+W  + DADV  F K  T L + +ID +    K  GK+  +A++I+A
Sbjct: 243 LDAAKTSPYQFYQFWLKVADADVYKFLKYFTFLSIKKIDEIETADKASGKK-PKAQRILA 301

Query: 304 TEITTMVHGRE--EAEKAATAAMECFDMSIHSQH---------MPTISISKDEVSRGMGL 352
            E+T ++HG    +A +  T ++   D S  ++          +PTI      VS  + +
Sbjct: 302 EEMTRLIHGDVALQAAQRITDSLFSGDESNLTEQDYAQLALDGLPTIM-----VSGSLNV 356

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSI 383
           +  +V+AG A S  EAR  +++ A+ IN ++
Sbjct: 357 VEALVQAGLAQSNKEARGFVQNGAVLINGAV 387


>gi|13508408|ref|NP_110358.1| tyrosyl tRNA synthetase [Mycoplasma pneumoniae M129]
 gi|2501075|sp|P75122|SYY_MYCPN RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|1673835|gb|AAB95821.1| tyrosyl tRNA synthetase [Mycoplasma pneumoniae M129]
          Length = 399

 Score =  276 bits (705), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 151/412 (36%), Positives = 230/412 (55%), Gaps = 19/412 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D L++L ERG   Q +  +EL  L +QG    Y+G+D TA SLH G+   L +    Q  
Sbjct: 4   DLLALLKERGLFVQANFEKELKQLLNQGSFAFYVGFDPTAPSLHIGNYVLLHVAQIFQAM 63

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P  L+G GT++IGDP+ R E R+MM  + I EN   IK     F+      ++ +  
Sbjct: 64  GHIPHVLLGSGTALIGDPTGRMELRQMMSRETIAENTRNIKKQIRRFLG-----SNVVFC 118

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
            NETWL  + YI+++RE+G  FSVN+ML+ ++  +R +R   L+ +E NYM+LQAYDF  
Sbjct: 119 QNETWLKKLNYIEVIRELGPCFSVNKMLATDAFSARWER--GLTLMELNYMVLQAYDFYY 176

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + Y  +LQ+GGSDQW NI+ G DL  R    +++ +T+ LL  A+G KMGK+ SGA+W
Sbjct: 177 LNQKYGVQLQIGGSDQWANILAGADLIRRKTQKQVYGMTTNLLVKANGEKMGKSASGALW 236

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           L+ + TSPY+F+QYW N+DDA +      LT L    I+ +  L+G  I EAK  +A E+
Sbjct: 237 LDPQKTSPYDFYQYWINLDDASLQKVFLMLTKLDTKAIETLCNLKGAAIKEAKAKLAFEL 296

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
           T  +HG + A  A   +   F     ++           V  G  L+ +IV  G   S +
Sbjct: 297 TDAIHGTKAALVAQAKSARIFAFQPDTE--------TKTVRAGTRLVDVIVDLGLVVSRS 348

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLCG 418
           EARR ++   + IN   +++ ++ ++     S+  + +  GKK  +   +  
Sbjct: 349 EARRVIQQGGLTINQEKVTDVEMVLQ----ASSQPLVIGKGKKRFVTVQVIA 396


>gi|332364486|gb|EGJ42257.1| tyrosine--tRNA ligase [Streptococcus sanguinis SK355]
          Length = 419

 Score =  276 bits (705), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 141/384 (36%), Positives = 219/384 (57%), Gaps = 11/384 (2%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L ERG + Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  GHKP 
Sbjct: 8   LKERGLVFQTTDEEALRKALEEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAGHKPY 67

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+D  R +   + ++  ++ I+   S F+ +  G   A M+NN  W
Sbjct: 68  ALVGGATGLIGDPSFKDAERSLQTKETVEGWVKSIQNQLSRFLDFEKGDNKAEMVNNYDW 127

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
             SI +ID LR++G +F+VN M+S +SV+SR+  E  +S+ EF Y I+Q YDF  L +N+
Sbjct: 128 FSSISFIDFLRDVGKYFTVNYMMSKDSVKSRI--ETGISYTEFAYQIMQGYDFYVLNQNH 185

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
              LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WLN + 
Sbjct: 186 GVTLQIGGSDQWGNMTAGTELLRRKADKTGHVMTVPLITDATGKKFGKSEGNAVWLNPDK 245

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATEITTM 309
           TSPY  +Q+W N+ DAD + F K  T L + EI+ + +      +E  A+K++A E+ ++
Sbjct: 246 TSPYEMYQFWMNVMDADAIRFLKIFTFLSLDEIEEIRQQFESAPHERLAQKVLAREVVSL 305

Query: 310 VHGREEAEKAATAAMECFDMSIHS-------QHMPTISISKDEVSRGMGLLTLIVKAGFA 362
           VHG+E  + A     + F  +I +       Q +  +   + +    + ++ L+V AG  
Sbjct: 306 VHGQEAYQDALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVQAEDNLNIVELLVTAGVV 365

Query: 363 TSTNEARRHLKSNAIKINNSIISN 386
            S  +AR  +++ AI +N   I +
Sbjct: 366 NSKRQAREDVQNGAIYLNGERIQD 389


>gi|305681987|ref|ZP_07404791.1| tyrosine--tRNA ligase [Corynebacterium matruchotii ATCC 14266]
 gi|305658460|gb|EFM47963.1| tyrosine--tRNA ligase [Corynebacterium matruchotii ATCC 14266]
          Length = 418

 Score =  276 bits (705), Expect = 7e-72,   Method: Compositional matrix adjust.
 Identities = 157/407 (38%), Positives = 229/407 (56%), Gaps = 18/407 (4%)

Query: 15  RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLM 74
           RG I+Q ++  EL   C Q  +T Y G+D T +SLHAGHL  L++L   Q  GH+ ++L 
Sbjct: 10  RGLINQATDVDELRAACEQ-PITLYCGFDPTGASLHAGHLVPLIMLKRFQNAGHRVLTLA 68

Query: 75  GGGTSIIGDPSFRDESRR-MMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
           GG T +IGDP  RD   R M+  +EI  NI  I+    SFI Y  GK  A+M+NN  WL 
Sbjct: 69  GGATGMIGDP--RDVGERSMLSEEEIAHNIAAIQDQIRSFIDYTDGK--AIMVNNADWLG 124

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDC 193
               ID LR++G  FS+N ML  E+V+ RL  +  +S+ EF+YM+LQ+YD+V L + YDC
Sbjct: 125 KFSLIDYLRDLGKNFSLNTMLDRETVKRRLGSD-GISYTEFSYMLLQSYDYVHLNREYDC 183

Query: 194 RLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA-IWLNKEMT 252
            LQ+GG DQWGNI+ G+DL  R+   K+  LT PL+T A G K GK+  G  +WL+ E+T
Sbjct: 184 VLQIGGGDQWGNIVSGVDLNRRMNQTKVHGLTVPLVTDAQGQKFGKSTGGGKLWLDPELT 243

Query: 253 SPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEITTMV 310
           SPY+++QY+ N  D+ V+ + +  T L  +EI    +A  +   + EA++ +A E+TT+V
Sbjct: 244 SPYSWYQYFLNAGDSVVIDYLRWFTFLSQAEIAEYEVAVQERPHLREAQRRLAQEMTTLV 303

Query: 311 HGREEAEKAATAAMECF--------DMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFA 362
           HG    E    AA   F        D +     +   ++++        ++ L+V +G A
Sbjct: 304 HGSAATEAVELAAQALFGRAELTELDEATLRGALQETTVAEIAPQDPRTIVDLLVASGLA 363

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
            S   ARR +      +NN  IS+E  +    D      + L  GKK
Sbjct: 364 ASKGAARRTINEGGAYVNNQRISSEDWEPTADDLLYGTWLVLRRGKK 410


>gi|126662992|ref|ZP_01733990.1| putative tyrosyl-tRNA synthetase 1 [Flavobacteria bacterium BAL38]
 gi|126624650|gb|EAZ95340.1| putative tyrosyl-tRNA synthetase 1 [Flavobacteria bacterium BAL38]
          Length = 435

 Score =  275 bits (704), Expect = 7e-72,   Method: Compositional matrix adjust.
 Identities = 155/427 (36%), Positives = 236/427 (55%), Gaps = 28/427 (6%)

Query: 15  RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLM 74
           RG  H +    E  +L  +   TAYIG+D TA SLH G L Q++LL  L+K+GHK I+L+
Sbjct: 11  RGLFHDMMPGTEEQLL--KEATTAYIGFDPTADSLHIGSLVQIILLMHLRKSGHKAIALV 68

Query: 75  GGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA-LMLNNETWLC 133
           GG T +IGDPS +   R ++    +  N+E IK + S F+ +     +A +++NN  W+ 
Sbjct: 69  GGATGMIGDPSGKSNERNLLDEATLNHNVEGIKSVLSRFLDFDAKDENAPILVNNYDWMK 128

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE---QSLSFLEFNYMILQAYDFVELAKN 190
              +ID  R+IG   +VN M+S +SV+ RL  E   + +SF EF Y ++Q YDF  L K+
Sbjct: 129 DFSFIDFARDIGKRITVNYMMSKDSVKKRLSGEEGAEGMSFTEFTYQLIQGYDFYHLNKH 188

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKT-----PKLFALTSPLLTTASGTKMGKTLSGAI 245
           Y+C LQMGGSDQWGNI  G +L  R+        K +ALT+PL+T A G+K GK+  G +
Sbjct: 189 YNCLLQMGGSDQWGNITTGTELVRRMNVGNDDKSKAYALTTPLITKADGSKFGKSEGGNV 248

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKKIIA 303
           WL+ + TS Y F+Q+W N  D D   + K  T L    I+++  A  +   +   +K +A
Sbjct: 249 WLDADKTSVYKFYQFWLNATDVDAEKYIKIFTFLDKDTIEKLIAAHNEAPHLRVLQKRLA 308

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHS-------------QHMPTISISKDEVSRGM 350
            EIT MVH   + E A  A+   F  S+               + +P   IS ++++ G+
Sbjct: 309 EEITVMVHSAADLENAIAASNAFFSPSMDELKKLDEKTFLEVFEGVPQAEISMEDLNAGL 368

Query: 351 GLL-TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
            ++  L  K  F  S ++ARR LK N+I +N   +  +K+ I  +D  +   + L  GKK
Sbjct: 369 DMIAALAAKTNFLASNSDARRELKQNSISLNKEKVGEDKI-ITKEDLINNQFLLLQKGKK 427

Query: 410 NHIICHL 416
           N+ +  +
Sbjct: 428 NYYVIKV 434


>gi|325689600|gb|EGD31605.1| tyrosine--tRNA ligase [Streptococcus sanguinis SK115]
          Length = 419

 Score =  275 bits (704), Expect = 7e-72,   Method: Compositional matrix adjust.
 Identities = 142/384 (36%), Positives = 220/384 (57%), Gaps = 11/384 (2%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L ERG + Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  GHKP 
Sbjct: 8   LKERGLVFQTTDEAALRKALEEGQVSYYSGYDPTADSLHLGHLVAILTSRRLQLAGHKPY 67

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSFRD  R +   + ++  ++ I+   S F+ +  G   A M+NN  W
Sbjct: 68  ALVGGATGLIGDPSFRDAERSLQTKETVEGWVKSIQDQLSRFLDFEKGDNKAEMVNNYDW 127

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
             SI +ID LR++G +F+VN M+S +SV+SR+  E  +S+ EF Y I+Q YDF  L +N+
Sbjct: 128 FSSISFIDFLRDVGKYFTVNYMMSKDSVKSRI--ETGISYTEFAYQIMQGYDFYILNQNH 185

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
              LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WLN + 
Sbjct: 186 GVTLQIGGSDQWGNMTAGTELLRRKADKTGHVITVPLITDATGKKFGKSEGNAVWLNPDK 245

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATEITTM 309
           TSPY  +Q+W N+ DAD + F K  T L + EI+ + +      +E  A+K++A E+ ++
Sbjct: 246 TSPYEMYQFWMNVMDADAIRFLKIFTFLSLDEIEEIRQQFEAAPHERLAQKVLAREVVSL 305

Query: 310 VHGREEAEKAATAAMECFDMSIHS-------QHMPTISISKDEVSRGMGLLTLIVKAGFA 362
           VHG+E  ++A     + F  +I +       Q +  +   + +    + ++ L+V AG  
Sbjct: 306 VHGQEAYQEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVQAEDSLNIVELLVTAGVV 365

Query: 363 TSTNEARRHLKSNAIKINNSIISN 386
            S  +AR  +++ AI +N   I +
Sbjct: 366 NSKRQAREDVQNGAIYLNGERIQD 389


>gi|225022590|ref|ZP_03711782.1| hypothetical protein CORMATOL_02632 [Corynebacterium matruchotii
           ATCC 33806]
 gi|224944498|gb|EEG25707.1| hypothetical protein CORMATOL_02632 [Corynebacterium matruchotii
           ATCC 33806]
          Length = 418

 Score =  275 bits (704), Expect = 7e-72,   Method: Compositional matrix adjust.
 Identities = 157/407 (38%), Positives = 229/407 (56%), Gaps = 18/407 (4%)

Query: 15  RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLM 74
           RG I+Q ++  EL   C Q  +T Y G+D T +SLHAGHL  L++L   Q  GH+ ++L 
Sbjct: 10  RGLINQATDVDELRAACEQ-PITLYCGFDPTGASLHAGHLVPLIMLKRFQNAGHRVLTLA 68

Query: 75  GGGTSIIGDPSFRDESRR-MMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
           GG T +IGDP  RD   R M+  +EI  NI  I+    SFI Y  GK  A+M+NN  WL 
Sbjct: 69  GGATGMIGDP--RDVGERSMLSEEEIAHNIAAIQDQIRSFIDYTDGK--AIMVNNADWLG 124

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDC 193
               ID LR++G  FS+N ML  E+V+ RL  +  +S+ EF+YM+LQ+YD+V L + YDC
Sbjct: 125 KFSLIDYLRDLGKNFSLNTMLDRETVKRRLGSD-GISYTEFSYMLLQSYDYVHLNREYDC 183

Query: 194 RLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA-IWLNKEMT 252
            LQ+GG DQWGNI+ G+DL  R+   K+  LT PL+T A G K GK+  G  +WL+ E+T
Sbjct: 184 VLQIGGGDQWGNIVSGVDLNRRMNQTKVHGLTVPLVTDAQGQKFGKSTGGGKLWLDPELT 243

Query: 253 SPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEITTMV 310
           SPY+++QY+ N  D+ V+ + +  T L  +EI    +   +   + EA++ +A E+TT+V
Sbjct: 244 SPYSWYQYFLNAGDSVVIDYLRWFTFLSQAEIAEYEVTVQERPHLREAQRRLAQEMTTLV 303

Query: 311 HGREEAEKAATAAMECF--------DMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFA 362
           HG    E    AA   F        D +     +   ++++        ++ L+V +G A
Sbjct: 304 HGSAATEAVELAAQALFGRAELTELDEATLRGALQETTVAEITPQDPRTIVDLLVASGLA 363

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
            S   ARR +K     +NN  IS+E  +    D      + L  GKK
Sbjct: 364 ASKGAARRTIKEGGAYVNNQRISSEDWEPTADDLLYGTWLVLRRGKK 410


>gi|325285904|ref|YP_004261694.1| Tyrosyl-tRNA synthetase [Cellulophaga lytica DSM 7489]
 gi|324321358|gb|ADY28823.1| Tyrosyl-tRNA synthetase [Cellulophaga lytica DSM 7489]
          Length = 431

 Score =  275 bits (704), Expect = 7e-72,   Method: Compositional matrix adjust.
 Identities = 154/428 (35%), Positives = 233/428 (54%), Gaps = 23/428 (5%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+F++ L  RG IH +    E  +L  + +  AY+G D TA SLH GHL  +M+L   Q 
Sbjct: 3   SNFVAELKWRGMIHDVMPETEEHLL--EQMRAAYVGIDPTADSLHIGHLVSVMMLRHFQL 60

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA-L 124
            GHKP +L+GG T +IGDPS +   R ++  + ++ N   IK   S F+ + + + +A +
Sbjct: 61  AGHKPYALIGGATGMIGDPSGKSAERNLLDEKTLRHNQNAIKDQLSRFLDFKSDEENAAV 120

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQAY 182
           ++NN  W+    +++ +R++G   +VN M++ +SV+ RL  E  + +SF EF Y ++Q Y
Sbjct: 121 LVNNYDWMKEFSFLEFIRDVGKHITVNYMMAKDSVKKRLTSEAKEGMSFTEFTYQLVQGY 180

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DF  L K ++C LQMGGSDQWGNI  G ++  R+   K +ALT PL+T A GTK GKT  
Sbjct: 181 DFFHLFKEHNCTLQMGGSDQWGNITTGTEMIRRIGGGKGYALTCPLITKADGTKFGKTEG 240

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKK 300
           G IWL+ E TSPY F+QYW N  D D   F K  T L   EID +     +   +   +K
Sbjct: 241 GNIWLDAERTSPYKFYQYWLNTSDEDAEKFIKIFTFLTKEEIDALIAEHKEAPHMRALQK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDEV 346
            +A EIT  VH +++ + A  A+   F  S                 + +P   ++K ++
Sbjct: 301 KLAEEITISVHSKQDLDNAIKASNILFGKSTSDDLKTLDEKTFLDIFEGVPQAEVTKTDI 360

Query: 347 SRGMGLL-TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLS 405
             G+ ++  L  K  F  S   ARR LK N+I +N   +  E   I  +D  +   + L 
Sbjct: 361 EEGLDMIGALAAKTQFLDSNGAARRELKQNSISVNKEKVK-EDYVITSKDLINNKFVLLQ 419

Query: 406 FGKKNHII 413
            GKKN+ +
Sbjct: 420 RGKKNYFV 427


>gi|15616741|ref|NP_239953.1| tyrosyl-tRNA synthetase [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
 gi|11134935|sp|P57221|SYY_BUCAI RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|25292899|pir||G84943 tyrosine-tRNA ligase (EC 6.1.1.1) [imported] - Buchnera sp.
           (strain APS)
 gi|10038804|dbj|BAB12839.1| tyrosyl-tRNA synthetase [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
          Length = 422

 Score =  275 bits (704), Expect = 7e-72,   Method: Compositional matrix adjust.
 Identities = 155/388 (39%), Positives = 224/388 (57%), Gaps = 19/388 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+S L  RG I  I+N   L  L     ++ Y G+D T  SLH GHL  L++L   Q  
Sbjct: 5   NFISRLHNRGLISHITNEDNLSKLIENKSISLYCGFDPTEESLHIGHLLPLIMLKRFQIA 64

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI L+GG TS+IGDPSF+++ R    +  +    EKI    S F+ +  GK  A++L
Sbjct: 65  GHRPIILIGGATSLIGDPSFKEKERVFNSNYNVNIWTEKITKQISCFLDFNCGKNSAVLL 124

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDFV 185
           NN TW   I  +  LR++G +FSVN M++  +V+ R+ R +Q +SF EF+Y +LQAYDF 
Sbjct: 125 NNNTWFKQINILSFLRDVGKYFSVNTMINRAAVKQRITRPDQGISFTEFSYNLLQAYDFF 184

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L + Y   LQ+GG+DQWGNI  G+ L  R     ++ LT PLL  ++G K GKT SG I
Sbjct: 185 ILNQQYQADLQIGGADQWGNISSGMHLIHRKTKRVVYGLTVPLLIQSNGIKFGKTESGTI 244

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK---LQGKEINEAKKII 302
           WL+   TSPY F+Q+W NI+DA+V  F K  T + +SEI+++ K   ++ + IN+ K ++
Sbjct: 245 WLDSNKTSPYKFYQFWMNIEDANVYYFLKLFTFIKVSEINKLEKNKNIKNQIIND-KSLL 303

Query: 303 ATEITTMVHGREE---AEKAA-------TAAMECFDMSIHSQHMPTISISKDEVSRGMGL 352
           A  IT +VHG+E+   AE+         T  +E  D+    Q +    I   EVS    L
Sbjct: 304 AKHITQLVHGKEKLLAAERITKFLFLKNTTHIEESDL----QQLKQDGIPFIEVSNVKDL 359

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKIN 380
              +V    A S  +A+  + SN+I IN
Sbjct: 360 QEALVLTSLAQSRTQAKNMIISNSISIN 387


>gi|325693921|gb|EGD35840.1| tyrosine--tRNA ligase [Streptococcus sanguinis SK150]
          Length = 419

 Score =  275 bits (704), Expect = 8e-72,   Method: Compositional matrix adjust.
 Identities = 141/384 (36%), Positives = 220/384 (57%), Gaps = 11/384 (2%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L ERG + Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  GHKP 
Sbjct: 8   LKERGLVFQTTDEAALRKALEEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAGHKPY 67

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+D  R +   + ++  ++ I+   S F+ +  G   A M+NN  W
Sbjct: 68  ALVGGATGLIGDPSFKDAERSLQTKETVEGWVKSIQDQLSRFLDFEKGDNKAEMVNNYDW 127

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
             SI +ID LR++G +F+VN M+S +SV+SR+  E  +S+ EF Y I+Q YDF  L +N+
Sbjct: 128 FSSISFIDFLRDVGKYFTVNYMMSKDSVKSRI--ETGISYTEFAYQIMQGYDFYILNQNH 185

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
              LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WLN + 
Sbjct: 186 SVTLQIGGSDQWGNMTAGTELLRRKADKTGHVITVPLITDATGKKFGKSEGNAVWLNPDK 245

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATEITTM 309
           TSPY  +Q+W N+ DAD + F K  T L + EI+ + +      +E  A+K++A E+ ++
Sbjct: 246 TSPYEMYQFWMNVMDADAIRFLKIFTFLSLDEIEEIRQQFEAAPHERLAQKVLAREVVSL 305

Query: 310 VHGREEAEKAATAAMECFDMSIHS-------QHMPTISISKDEVSRGMGLLTLIVKAGFA 362
           VHG+E  ++A     + F  +I +       Q +  +   + +    + ++ L+V AG  
Sbjct: 306 VHGQEAYQEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVQAEDNLNIVELLVTAGVV 365

Query: 363 TSTNEARRHLKSNAIKINNSIISN 386
            S  +AR  +++ AI +N   I +
Sbjct: 366 NSKRQAREDVQNGAIYLNGERIQD 389


>gi|302023205|ref|ZP_07248416.1| tyrosyl-tRNA synthetase [Streptococcus suis 05HAS68]
          Length = 428

 Score =  275 bits (704), Expect = 8e-72,   Method: Compositional matrix adjust.
 Identities = 147/419 (35%), Positives = 228/419 (54%), Gaps = 18/419 (4%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG + Q ++   L    ++G V+ Y GYD TA SLH GHL  ++    LQ  GHKP 
Sbjct: 7   LKARGLVFQTTDEEALVKALTEGQVSYYTGYDPTADSLHLGHLVVILTSRRLQLAGHKPY 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+D  R +     +   + KI+G  S F+ +  G   A M+NN  W
Sbjct: 67  ALVGGATGLIGDPSFKDAERSLQTKDTVDGWVTKIQGQLSRFLDFENGDNKAEMVNNYDW 126

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
              I +ID LR++G +++VN M+S +SV+ R+  E  +S+ EF Y I+Q YDF EL   Y
Sbjct: 127 FSDISFIDFLRDVGKYYTVNYMMSKDSVKKRI--ETGISYTEFAYQIMQGYDFYELNDKY 184

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
           +  LQ+GGSDQWGN+  G +L  R        +T PL+T ++G K GK+   A+WL+ + 
Sbjct: 185 NVTLQIGGSDQWGNMTAGTELLRRKADKSGHVMTVPLITDSTGKKFGKSEGNAVWLDADK 244

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATEITTM 309
           TSPY  +Q+W N+ D D V F K  T L + EI  + K      +E  A+KI+A E+ T+
Sbjct: 245 TSPYEMYQFWLNVMDDDAVRFLKIFTFLSLDEIAEIEKQFDAARHERLAQKILAREVVTL 304

Query: 310 VHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIVKA 359
           VHG E   +A     + F  +I +           ++P  ++  ++    + ++ L+V +
Sbjct: 305 VHGEEAYNQALNITEQLFAGNIKNLSAKELKQGLSNVPNYAVQAED---NLNIVELLVTS 361

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK-LSFGKKNHIICHLC 417
           G  TS  +AR  +++ AI +N   + +    +   D D  G +  +  GKK + +  L 
Sbjct: 362 GIVTSKRQAREDVQNGAIYVNGERVQDLDYTLSDSDRDLDGELTVIRRGKKKYSVLTLL 420


>gi|332885512|gb|EGK05761.1| tyrosyl-tRNA synthetase [Dysgonomonas mossii DSM 22836]
          Length = 430

 Score =  275 bits (704), Expect = 8e-72,   Method: Compositional matrix adjust.
 Identities = 155/427 (36%), Positives = 234/427 (54%), Gaps = 22/427 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG IH+I    E  +   + + + Y+G D TA SLH GHL  +M+L   Q+ 
Sbjct: 2   NFVEELRWRGMIHEIMPGTEEQL--QKELTSGYVGIDPTADSLHIGHLVGVMILKHFQRA 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA-LM 125
           GH+PI+L+GG T +IGDPS +   R ++    ++ N E +K   + F+ + + K +A L+
Sbjct: 60  GHRPIALIGGATGMIGDPSMKSAERNLLDEATLRHNQESLKKQLAKFLDFESDKPNAALL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQS--LSFLEFNYMILQAYD 183
           +NN  W+    +++ +R+IG   +VN M+S +SV+ RL  E S  +SF EF+Y ++Q YD
Sbjct: 120 VNNYDWMKDFSFLNFIRDIGKHITVNYMMSKDSVKKRLNGESSEGMSFTEFSYQLMQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ L +   CR+QMGGSDQWGNI  G +L  R    + FAL  PL+T A GTK GKT SG
Sbjct: 180 FLHLYQTLGCRIQMGGSDQWGNITTGTELIRRKAGGEAFALVCPLITKADGTKFGKTESG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKKI 301
            +WL++  TSPY F+Q+W N+ D D   + K  T L   EI+ +   Q     +   +K 
Sbjct: 240 NVWLDRRYTSPYKFYQFWLNVSDEDAEKYIKIFTALDKEEIEGLVVEQKAAPHLRALQKR 299

Query: 302 IATEITTMVHGREEAEKAATA-----------AMECFDMSIHSQ---HMPTISISKDEVS 347
           +A EIT MVH  E+  +A  A           A++  D     Q    +PT  ISKDE++
Sbjct: 300 LAKEITIMVHSEEDYNQAVEASNILFGNATADALKKLDEETFLQVFEGVPTFDISKDELA 359

Query: 348 RGMGLLTLIV-KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+  + L+  KA    S  E R+ +++  + IN   + N    I      +   I    
Sbjct: 360 AGIKAVDLLTEKAAVFPSKGEMRKTVQAGGVMINKEKLENFDDAIDASSLIAEKYIIAQK 419

Query: 407 GKKNHII 413
           GKKN+ +
Sbjct: 420 GKKNYFL 426


>gi|149371964|ref|ZP_01891283.1| tyrosyl-tRNA synthetase [unidentified eubacterium SCB49]
 gi|149355104|gb|EDM43665.1| tyrosyl-tRNA synthetase [unidentified eubacterium SCB49]
          Length = 430

 Score =  275 bits (704), Expect = 8e-72,   Method: Compositional matrix adjust.
 Identities = 152/427 (35%), Positives = 236/427 (55%), Gaps = 23/427 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG +H +    E  +L  + +  AY+G+D TA SLH G+L  +MLL + Q++
Sbjct: 3   NFVEELQWRGMVHDVMPDTETHLL--EQMRAAYVGFDPTADSLHIGNLVPIMLLSFFQRS 60

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKT-DALM 125
           GHKP++L+GG T +IGDPS +   R  +  + ++ N   ++   S F+ + +G   +AL+
Sbjct: 61  GHKPVALVGGATGMIGDPSGKSNERNFLDEKTLRHNQACVRKQLSQFLDFSSGAANEALL 120

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQS--LSFLEFNYMILQAYD 183
           +NN  W+    ++D +R++G   +VN M++ +SV+SR   E +  LSF EF Y ++Q YD
Sbjct: 121 VNNYDWMKEFSFLDFIRDVGKHITVNYMMAKDSVKSRFSGENADGLSFTEFTYQLVQGYD 180

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ L KN +  LQMGGSDQWGNI  G +L  R+   K +ALT PL+T + G+K GK+  G
Sbjct: 181 FLHLFKNQNITLQMGGSDQWGNITTGTELIRRIGGGKGYALTCPLITKSDGSKFGKSEGG 240

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKKI 301
            +WL+ + TSPY F+QYW N  D D   + K  T L    ID +  +  +       +K 
Sbjct: 241 NVWLDPKKTSPYKFYQYWLNTSDEDAEKYIKIFTFLDKETIDALVVSHREAPHQRALQKR 300

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDEVS 347
           +A E+TT VH +E  E A  A+   F  S                 + +P   +S+ +++
Sbjct: 301 LAQEVTTTVHSQEAYETAVAASEILFGKSTSEDLKKIDADTFLDIFEGVPQAEVSRQKIT 360

Query: 348 RGMGLL-TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+ ++  L  + GF  S  EARR LK N+I +N   +  E   I   D  +   + L  
Sbjct: 361 DGLDIIGGLAEQTGFLKSNGEARRALKENSISVNKEKV-KEGYSISEADLLNDRFVLLQR 419

Query: 407 GKKNHII 413
           GKKN+ I
Sbjct: 420 GKKNYFI 426


>gi|229013863|ref|ZP_04170991.1| Tyrosyl-tRNA synthetase 1 [Bacillus mycoides DSM 2048]
 gi|228747532|gb|EEL97407.1| Tyrosyl-tRNA synthetase 1 [Bacillus mycoides DSM 2048]
          Length = 418

 Score =  275 bits (704), Expect = 8e-72,   Method: Compositional matrix adjust.
 Identities = 150/385 (38%), Positives = 224/385 (58%), Gaps = 19/385 (4%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L  L  RG I+Q ++   L+ L  +  V  Y G+D TA SLH GH+  +++L   Q  GH
Sbjct: 4   LQDLEFRGLINQQTDAEGLEQLLEKESVKLYCGFDPTADSLHIGHMLPVLMLRRFQLAGH 63

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           +PI+L+GGGT +IGDPS +   R +     +    E IK   S+F+++G     A M NN
Sbjct: 64  QPIALVGGGTGMIGDPSGKKAERTLNTKDTVAYYTESIKNQLSNFLEFGNVDNPATMANN 123

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL ++  I  LR+IG  F +N ML+ ++V SRL  +  +SF EF+YMILQ+YDF+ L 
Sbjct: 124 YDWLGNLDVISFLRDIGKNFGLNYMLAKDTVASRL--DTGISFTEFSYMILQSYDFLNLY 181

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERL-KTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
           +N++CRLQ+GGSDQWGNI  G++L  +  +  K F LT PL+T + GTK GKT  GAIWL
Sbjct: 182 QNHNCRLQIGGSDQWGNITAGLELIRKSEEDAKAFGLTIPLVTKSDGTKFGKTEGGAIWL 241

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATE 305
           + E T+PY F+Q+W N DD DVV + K  T L   EI  + K   +  E   A+K + +E
Sbjct: 242 DPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLSHEEILELEKQVTEAPEKRAAQKSLGSE 301

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTL 355
           +T +VHG E  E+A   +   F  S+            + +P++  + ++      L+ L
Sbjct: 302 MTKLVHGEEALEQAIKISAALFSGSVAELTASEIEQGFKDVPSVERTAEDTV----LIDL 357

Query: 356 IVKAGFATSTNEARRHLKSNAIKIN 380
           +V++  + S  +AR  + + AI +N
Sbjct: 358 LVESKISPSKRQAREDVTNGAIYVN 382


>gi|324990487|gb|EGC22425.1| tyrosine--tRNA ligase [Streptococcus sanguinis SK353]
          Length = 419

 Score =  275 bits (704), Expect = 9e-72,   Method: Compositional matrix adjust.
 Identities = 141/384 (36%), Positives = 220/384 (57%), Gaps = 11/384 (2%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L ERG + Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  GHKP 
Sbjct: 8   LKERGLVFQTTDEAALRKALEEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAGHKPY 67

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+D  R +   + ++  ++ I+   S F+ +  G   A M+NN  W
Sbjct: 68  ALVGGATGLIGDPSFKDAERSLQTKETVEGWVKSIQNQLSRFLDFEKGDNKAEMVNNYDW 127

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
             SI +ID LR++G +F+VN M+S +SV+SR+  E  +S+ EF Y I+Q YDF  L +N+
Sbjct: 128 FSSISFIDFLRDVGKYFTVNYMMSKDSVKSRI--ETGISYTEFAYQIMQGYDFYILNQNH 185

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
              LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WLN + 
Sbjct: 186 GVTLQIGGSDQWGNMTAGTELLRRKADKTGHVMTVPLITDATGKKFGKSEGNAVWLNPDK 245

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATEITTM 309
           TSPY  +Q+W N+ DAD + F K  T L + EI+ + +      +E  A+K++A E+ ++
Sbjct: 246 TSPYEMYQFWMNVMDADAIRFLKIFTFLSLDEIEEIRQQFEAAPHERLAQKVLAREVVSL 305

Query: 310 VHGREEAEKAATAAMECFDMSIHS-------QHMPTISISKDEVSRGMGLLTLIVKAGFA 362
           VHG+E  ++A     + F  +I +       Q +  +   + +    + ++ L+V AG  
Sbjct: 306 VHGQEAYQEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVQAEDNLNIVELLVTAGVV 365

Query: 363 TSTNEARRHLKSNAIKINNSIISN 386
            S  +AR  +++ AI +N   I +
Sbjct: 366 NSKRQAREDVQNGAIYLNGERIQD 389


>gi|135197|sp|P00952|SYY_BACST RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|157836396|pdb|2TS1|A Chain A, Structure Of Tyrosyl-TRNA SYNTHETASE REFINED AT 2.3
           Angstroms Resolution. Interaction Of The Enzyme With The
           Tyrosyl Adenylate Intermediate
 gi|157836900|pdb|3TS1|A Chain A, Structure Of Tyrosyl-TRNA SYNTHETASE REFINED AT 2.3
           Angstroms Resolution. Interaction Of The Enzyme With The
           Tyrosyl Adenylate Intermediate
          Length = 419

 Score =  275 bits (703), Expect = 9e-72,   Method: Compositional matrix adjust.
 Identities = 153/393 (38%), Positives = 224/393 (56%), Gaps = 16/393 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D L+ L  RG ++Q ++   L  L ++  VT Y G+D TA SLH GHL  ++ +   Q+ 
Sbjct: 2   DLLAELQWRGLVNQTTDEDGLRKLLNEERVTLYCGFDPTADSLHIGHLATILTMRRFQQA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI+L+GG T +IGDPS +   R +   + ++    +IK     F+ +      A + 
Sbjct: 62  GHRPIALVGGATGLIGDPSGKKSERTLNAKETVEAWSARIKEQLGRFLDFEADGNPAKIK 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W+  +  I  LR++G  FSVN M++ ESV+SR+  E  +SF EF+YM+LQAYDF+ 
Sbjct: 122 NNYDWIGPLDVITFLRDVGKHFSVNYMMAKESVQSRI--ETGISFTEFSYMMLQAYDFLR 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASGTKMGKTLSGAI 245
           L +   CRLQ+GGSDQWGNI  G++L  + K   + F LT PL+T A GTK GKT SG I
Sbjct: 180 LYETEGCRLQIGGSDQWGNITAGLELIRKTKGEARAFGLTIPLVTKADGTKFGKTESGTI 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIA 303
           WL+KE TSPY F+Q+W N DD DV+ + K  T L   EI+ + +   +  E   A+K +A
Sbjct: 240 WLDKEKTSPYEFYQFWINTDDRDVIRYLKYFTFLSKEEIEALEQELREAPEKRAAQKTLA 299

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSR------GMGLLTLIV 357
            E+T +VHG E   +A   +   F   I +     I     +V         + L+ L+V
Sbjct: 300 EEVTKLVHGEEALRQAIRISEALFSGDIANLTAAEIEQGFKDVPSFVHEGGDVPLVELLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQ 390
            AG + S  +AR  +++ AI +N      E+LQ
Sbjct: 360 SAGISPSKRQAREDIQNGAIYVN-----GERLQ 387


>gi|325954724|ref|YP_004238384.1| Tyrosyl-tRNA synthetase [Weeksella virosa DSM 16922]
 gi|323437342|gb|ADX67806.1| Tyrosyl-tRNA synthetase [Weeksella virosa DSM 16922]
          Length = 432

 Score =  275 bits (703), Expect = 9e-72,   Method: Compositional matrix adjust.
 Identities = 157/424 (37%), Positives = 240/424 (56%), Gaps = 24/424 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L+ RG IH I  P   + L  + + T Y+G+D TA SLH G L  + LL  LQ+ GH+P+
Sbjct: 9   LTWRGLIHNIM-PGTAEQLNKE-MTTGYVGFDPTADSLHVGSLVPIFLLVHLQRHGHRPV 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY-GTGKTDALMLNNET 130
           +L+GG T +IGDP+ +   R ++  + +++ +  IK   + F+ + G     A+++NN  
Sbjct: 67  ALVGGATGMIGDPTGKSAERNLLDEETLEKYVNGIKAQLARFLDFDGRNGNSAILVNNYD 126

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQS--LSFLEFNYMILQAYDFVELA 188
           W+    +ID +R +G   +VN M++ +SV+SRL  E +  +SF EF Y ++Q YD++ L 
Sbjct: 127 WMKDFSFIDFVRNVGKHLTVNYMMAKDSVKSRLSAESNVGMSFTEFTYQLIQGYDYLYLY 186

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA-IWL 247
           +    +LQMGGSDQWGNI  G +L  R    + FA T PL T A GTK GK+  G  IWL
Sbjct: 187 EKLGVKLQMGGSDQWGNITTGTELIRRTIQGEAFAFTCPLTTKADGTKFGKSEGGENIWL 246

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE--INEAKKIIATE 305
           +K+ TSPY F+Q+W N  DAD   + K  T L    ID + +   KE  + E ++ +ATE
Sbjct: 247 DKKRTSPYKFYQFWLNQADADCEKYIKIYTFLDKETIDDLIEHHRKEPHLRELQRKLATE 306

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDEVSRGMG 351
           IT MVHG +E  KA  A+   F  S                 + +P   I+K+++  G+ 
Sbjct: 307 ITIMVHGVDELHKAEKASQMLFGKSTSEDLKSLDTDTFLSVFEGVPQAIITKEDLENGLA 366

Query: 352 LLTLIV-KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
           ++ ++V K+GF  S +EARR L +NAI +N   I++E + +      +   + L  GKKN
Sbjct: 367 IVDVLVEKSGFLKSNSEARRELATNAISVNKEKITDEFI-LDTSHLINDKYVLLQKGKKN 425

Query: 411 HIIC 414
           + I 
Sbjct: 426 YFIL 429


>gi|117621106|ref|YP_855114.1| tyrosyl-tRNA synthetase [Aeromonas hydrophila subsp. hydrophila
           ATCC 7966]
 gi|189083640|sp|A0KFT8|SYY_AERHH RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|117562513|gb|ABK39461.1| tyrosyl-tRNA synthetase [Aeromonas hydrophila subsp. hydrophila
           ATCC 7966]
          Length = 422

 Score =  275 bits (703), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 159/421 (37%), Positives = 236/421 (56%), Gaps = 28/421 (6%)

Query: 8   FLSILSERGFIHQISNPREL-DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
            L  L+ RG + Q S+P  L D L +    T Y G+D TA SLH GHL  L++L   Q  
Sbjct: 6   LLDELTRRGLVAQNSDPVALADHLATP--RTVYCGFDPTAGSLHIGHLVPLLMLRRFQLA 63

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P++L+GG T +IGDPSF+   R +  S+ +Q  +  +     + +    G    L++
Sbjct: 64  GHTPVALVGGATGLIGDPSFKATERNLNSSETVQGWVASLSAQIKALLPASEGLAAPLLV 123

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDFV 185
           NN  W+  +  +D LR+IG  FSVN ML  ESVR RL R +Q +SF EF+Y +LQ+ D+ 
Sbjct: 124 NNADWMGQMSALDFLRDIGKHFSVNAMLVRESVRQRLARPDQGISFTEFSYALLQSQDYA 183

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L +   C LQ+GG+DQWGNI  G+DL  RL   +++ +T PL+T A GTK GKT  GAI
Sbjct: 184 VLNQRLGCTLQIGGNDQWGNITSGMDLTRRLHQAQVYGMTLPLITKADGTKFGKTEGGAI 243

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM----AKLQGKEINEAKKI 301
           WL+  +TSPY F+Q+W    D DV  F +  + +P++EI+ +    AK QG+++  A+++
Sbjct: 244 WLDPALTSPYAFYQFWLGTADEDVYRFLRYYSFMPLTEIEALEAEDAKRQGRKL--AQQV 301

Query: 302 IATEITTMVHGREEAEKAATAAMECF----------DMSIHSQH-MPTISISKDEVSRGM 350
           +A E+T +VHG+     A   +   F          D++  +Q  MP   I  +      
Sbjct: 302 LADELTELVHGKGALAAAQRISELLFSGEVARLGESDLAQLAQDGMPGWRIEGE-----T 356

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            L+TL+V++G A S   AR  L + AI +N  I   E L+   + F    ++ L  GKK 
Sbjct: 357 DLVTLLVESGLANSKRIARELLAAGAISLNGEIRREEPLRAADRLFGR--HLLLRRGKKQ 414

Query: 411 H 411
           +
Sbjct: 415 Y 415


>gi|327467040|gb|EGF12554.1| tyrosine--tRNA ligase [Streptococcus sanguinis SK330]
          Length = 419

 Score =  275 bits (703), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 144/400 (36%), Positives = 225/400 (56%), Gaps = 20/400 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L ERG + Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  GHKP 
Sbjct: 8   LKERGLVFQTTDEAALRKALEEGQVSYYSGYDPTADSLHLGHLVAILTSRRLQLAGHKPY 67

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+D  R +   + ++  ++ I+   S F+ +  G   A M+NN  W
Sbjct: 68  ALVGGATGLIGDPSFKDAERSLQTKETVEGWVKSIQDQLSRFLDFEKGDNKAEMVNNYDW 127

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
             SI +ID LR++G +F+VN M+S +SV+SR+  E  +S+ EF Y I+Q YDF  L +N+
Sbjct: 128 FSSISFIDFLRDVGKYFTVNYMMSKDSVKSRI--ETGISYTEFAYQIMQGYDFYILNQNH 185

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
              LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WLN + 
Sbjct: 186 GVTLQIGGSDQWGNMTAGTELLRRKADKTGHVITVPLITDATGKKFGKSEGNAVWLNPDK 245

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATEITTM 309
           TSPY  +Q+W N+ DAD + F K  T L + EI+ + +      +E  A+K++A E+ ++
Sbjct: 246 TSPYEMYQFWMNVMDADAIRFLKIFTFLTLDEIEEIRQQFEAAPHERLAQKVLAREVVSL 305

Query: 310 VHGREEAEKAATAAMECFDMSIHS-------QHMPTISISKDEVSRGMGLLTLIVKAGFA 362
           VHG+E  ++A     + F  +I +       Q +  +   + +    + ++ L+V AG  
Sbjct: 306 VHGQEAYQEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVQAEDNLNIVELLVTAGVV 365

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNI 402
            S  +AR  +++ AI +N           ++QD D   N+
Sbjct: 366 NSKRQAREDVQNGAIYLNGE---------RIQDLDYVLNV 396


>gi|228471982|ref|ZP_04056750.1| tyrosine--tRNA ligase [Capnocytophaga gingivalis ATCC 33624]
 gi|228276594|gb|EEK15307.1| tyrosine--tRNA ligase [Capnocytophaga gingivalis ATCC 33624]
          Length = 431

 Score =  275 bits (703), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 159/434 (36%), Positives = 234/434 (53%), Gaps = 36/434 (8%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG I  I    E  +L  +G+  AY+G D TA SLH GHL  +M+L   Q  
Sbjct: 3   NFVEELRWRGMIQDIMPETEQHLL--EGLRAAYVGIDPTADSLHIGHLVGVMMLRHFQNC 60

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY-GTGKTDALM 125
           GHKP +L+GG T +IGDPS +   R ++  + +  NI  IK   + F+ +  T    A +
Sbjct: 61  GHKPYALVGGATGMIGDPSGKSTERNLLTEEALAHNIAGIKKQLAKFLDFESTASNRAEL 120

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL---KREQSLSFLEFNYMILQAY 182
           +NN  W+    ++  +R+IG   +VN M++ +SV+ R    +  + +SF EF+Y +LQ +
Sbjct: 121 VNNYDWMKGFSFLSFIRDIGKHITVNYMMAKDSVKKRFDPNENTEGMSFTEFSYQLLQGF 180

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DF+ L +     LQMGGSDQWGNI  G +L  R  + K +ALT PL+T A GTK GK+  
Sbjct: 181 DFLHLYQEKGVTLQMGGSDQWGNITTGTELIRRKASGKAYALTCPLITKADGTKFGKSEG 240

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA--KLQGKEINEAKK 300
           G +WL+ E TSPY F+QYW N  DAD   + K  T LP  EI+ +    LQ   +   + 
Sbjct: 241 GNVWLDPEKTSPYKFYQYWINTSDADAQRYIKIFTMLPKEEIETLTAEHLQAPHLRILQN 300

Query: 301 IIATEITTMVHGREEAEKAATAA--------------------MECFDMSIHSQHMPTIS 340
            +A E+T +VHG+EE EKA  A+                    +E FD       +P   
Sbjct: 301 KLAEELTLLVHGKEEWEKAVQASGILFGNSTSEDLKKLDAKTFLEVFD------GVPQAE 354

Query: 341 ISKDEVSRGMGLL-TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDST 399
           I+ D++  G+ ++  L  K GF  S +EARR L  N+I +N   ++ E   +  +D  + 
Sbjct: 355 IALDDLKNGLDMIAALSAKTGFIKSNSEARRALGENSISVNKEKVT-EGYCLSEKDLLNQ 413

Query: 400 GNIKLSFGKKNHII 413
             I L  GKKN+ +
Sbjct: 414 RFILLQRGKKNYFL 427


>gi|157150873|ref|YP_001451195.1| tyrosyl-tRNA synthetase [Streptococcus gordonii str. Challis
           substr. CH1]
 gi|189029777|sp|A8AZI5|SYY_STRGC RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|157075667|gb|ABV10350.1| tyrosyl-tRNA synthetase [Streptococcus gordonii str. Challis
           substr. CH1]
          Length = 418

 Score =  275 bits (703), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 150/414 (36%), Positives = 227/414 (54%), Gaps = 15/414 (3%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L ERG I Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  GHKP 
Sbjct: 7   LKERGLIFQTTDEEALRQELEEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAGHKPY 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+D  R +   + ++  ++ I+G  +  + +  G+  A M+NN  W
Sbjct: 67  ALVGGATGLIGDPSFKDAERSLQTKETVEGWVKSIQGQLAGLLDFENGQNKAEMVNNYDW 126

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
              I +ID LR++G +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF  L + +
Sbjct: 127 FSDISFIDFLRDVGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFFILNQKH 184

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
              LQ+GGSDQWGN+  G +L  R        +T PL+T ASG K GK+   A+WLN + 
Sbjct: 185 GVTLQIGGSDQWGNMTAGTELLRRKADKTGHVITVPLITDASGKKFGKSEGNAVWLNADK 244

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATEITTM 309
           TSPY  +Q+W N+ D D V F K  T L + EI+ + K      +E  A+KI+A E+ T+
Sbjct: 245 TSPYEMYQFWMNVMDDDAVRFLKIFTFLSLDEIEEIRKQFEAAPHERLAQKILAREVVTL 304

Query: 310 VHGREEAEKAATAAMECFDMSIHS-------QHMPTISISKDEVSRGMGLLTLIVKAGFA 362
           VHG +  ++A     + F  +I +       Q +  +   + +    + ++ L+V AG  
Sbjct: 305 VHGEKAYQEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVQAEDNLNIVDLLVTAGVV 364

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN--IKLSFGKKNHIIC 414
            S  +AR  +++ AI +N   I +  L   L D D   N    +  GKK + + 
Sbjct: 365 NSKRQAREDVQNGAIYVNGDRIQD--LDYTLSDADKLENELTVIRRGKKKYFVL 416


>gi|219681496|ref|YP_002467881.1| tyrosyl-tRNA synthetase [Buchnera aphidicola str. 5A (Acyrthosiphon
           pisum)]
 gi|257471177|ref|ZP_05635176.1| tyrosyl-tRNA synthetase [Buchnera aphidicola str. LSR1
           (Acyrthosiphon pisum)]
 gi|254783576|sp|B8D8S2|SYY_BUCA5 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|219624339|gb|ACL30494.1| tyrosyl-tRNA synthetase [Buchnera aphidicola str. 5A (Acyrthosiphon
           pisum)]
          Length = 422

 Score =  275 bits (703), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 154/388 (39%), Positives = 224/388 (57%), Gaps = 19/388 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+S L  RG I  I+N   L  L     ++ Y G+D T  SLH GHL  L++L   Q  
Sbjct: 5   NFISRLHNRGLISHITNEDNLSKLIENKSISLYCGFDPTEESLHIGHLLPLIMLKRFQIA 64

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI L+GG TS+IGDPSF+++ R    +  +    EKI    S F+ +  GK  A++L
Sbjct: 65  GHRPIILIGGATSLIGDPSFKEKERVFNSNYNVNIWTEKITKQISCFLDFNCGKNSAVLL 124

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDFV 185
           NN TW   I  +  LR++G +FSVN M++  +V+ R+ R +Q +SF EF+Y +LQAYDF 
Sbjct: 125 NNNTWFKQINILSFLRDVGKYFSVNTMINRAAVKQRITRPDQGISFTEFSYNLLQAYDFF 184

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L + Y   LQ+GG+DQWGNI  G+ L  R     ++ LT PLL  ++G K GKT SG +
Sbjct: 185 ILNQQYQVDLQIGGADQWGNISSGMHLIHRKTKRVVYGLTVPLLIQSNGIKFGKTESGTV 244

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK---LQGKEINEAKKII 302
           WL+   TSPY F+Q+W NI+DA+V  F K  T + +SEI+++ K   ++ + IN+ K ++
Sbjct: 245 WLDSNKTSPYKFYQFWMNIEDANVYYFLKLFTFIKVSEINKLEKNKNIKNQIIND-KSLL 303

Query: 303 ATEITTMVHGREE---AEKAA-------TAAMECFDMSIHSQHMPTISISKDEVSRGMGL 352
           A  IT +VHG+E+   AE+         T  +E  D+    Q +    I   EVS    L
Sbjct: 304 AKHITQLVHGKEKLLAAERITKFLFLKNTTHIEESDL----QQLKQDGIPFIEVSNVKDL 359

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKIN 380
              +V    A S  +A+  + SN+I IN
Sbjct: 360 QEALVLTSLAQSRTQAKNMIISNSISIN 387


>gi|325688487|gb|EGD30504.1| tyrosine--tRNA ligase [Streptococcus sanguinis SK72]
          Length = 419

 Score =  275 bits (703), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 142/384 (36%), Positives = 219/384 (57%), Gaps = 11/384 (2%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L ERG + Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  GHKP 
Sbjct: 8   LKERGLVFQTTDEAALRKTLEEGQVSYYSGYDPTADSLHLGHLVAILTSRRLQLAGHKPY 67

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSFRD  R +   + ++  ++ I+   S F+ +  G   A M+NN  W
Sbjct: 68  ALVGGATGLIGDPSFRDAERSLQTKETVEGWVKSIQDQLSRFLDFEKGDNKAEMVNNYDW 127

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
             SI +ID LR++G +F+VN M+S +SV+SR+  E  +S+ EF Y I+Q YDF  L +N+
Sbjct: 128 FSSISFIDFLRDVGKYFTVNYMMSKDSVKSRI--ETGISYTEFAYQIMQGYDFYILNQNH 185

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
              LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WLN + 
Sbjct: 186 GVTLQIGGSDQWGNMTAGTELLRRKADKTGHVMTVPLITDATGKKFGKSEGNAVWLNPDK 245

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATEITTM 309
           TSPY  +Q+W N+ DAD + F K  T L + EI+ +        +E  A+K++A E+ ++
Sbjct: 246 TSPYEMYQFWMNVMDADAIRFLKIFTFLSLDEIEEIRHQFEAAPHERLAQKVLAREVVSL 305

Query: 310 VHGREEAEKAATAAMECFDMSIHS-------QHMPTISISKDEVSRGMGLLTLIVKAGFA 362
           VHG+E  ++A     + F  +I +       Q +  +   + +    + ++ L+V AG  
Sbjct: 306 VHGQEAYQEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVQAEDSLNIVELLVTAGVV 365

Query: 363 TSTNEARRHLKSNAIKINNSIISN 386
            S  +AR  +++ AI +N   I +
Sbjct: 366 NSKRQAREDVQNGAIYLNGERIQD 389


>gi|60593917|pdb|1WQ4|A Chain A, Escherichia Coli Tyrosyl-Trna Synthetase Mutant Complexed
           With L-Tyrosine
          Length = 321

 Score =  275 bits (703), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 137/318 (43%), Positives = 197/318 (61%), Gaps = 5/318 (1%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +    G+D TA SLH GHL  L+ L   Q+
Sbjct: 3   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALVCGFDPTADSLHLGHLVPLLCLKRFQQ 62

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +QE ++KI+   + F+ +  G+  A+ 
Sbjct: 63  AGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDCGENSAIA 122

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDF 184
            NN  W  ++  +  LR+IG  FSVN+M++ E+V+ RL RE Q +SF EF+Y +LQ YDF
Sbjct: 123 ANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNREDQGISFTEFSYNLLQGYDF 182

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K Y   L +GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 183 ACLNKQYGVVLCIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 242

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+ +    K  GK    A+ +
Sbjct: 243 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINALEEEDKNSGK-APRAQYV 301

Query: 302 IATEITTMVHGREEAEKA 319
           +A ++T +VHG E  + A
Sbjct: 302 LAEQVTRLVHGEEGLQAA 319


>gi|299822730|ref|ZP_07054616.1| tyrosine--tRNA ligase [Listeria grayi DSM 20601]
 gi|299816259|gb|EFI83497.1| tyrosine--tRNA ligase [Listeria grayi DSM 20601]
          Length = 473

 Score =  275 bits (703), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 152/390 (38%), Positives = 221/390 (56%), Gaps = 21/390 (5%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           K + +  L  RG ++Q ++   L  L  +  +  Y G D +  S+H GHL   M+L   Q
Sbjct: 55  KMNIIEELKWRGAVYQQTDEEGLKELVEKESIALYCGIDPSGDSMHIGHLIPFMILRRFQ 114

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           K GH PI L+GG T  IGDPS + E R++   ++IQ+N+E ++       ++  G   A 
Sbjct: 115 KAGHTPIVLVGGATGTIGDPSGKKEERQLQSIEQIQKNVEGLRSQLGQIFEF-EGAHAAK 173

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M+NN  W   +  +D LR+ G  F+VN MLS + V SRL  +  +SF EF+Y ILQA DF
Sbjct: 174 MVNNYDWTKELSILDFLRDFGKEFNVNIMLSKDVVASRL--QNGISFTEFSYQILQAMDF 231

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLK--TPKLFALTSPLLTTASGTKMGKTLS 242
           + L ++ DCRLQ+GGSDQWGNI  G+DL  + +    K F LT PLLT A GTK GKT  
Sbjct: 232 LHLYQHEDCRLQIGGSDQWGNITAGLDLIRKKEGDKAKAFGLTIPLLTKADGTKFGKTEG 291

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKK 300
           GAIW+N+E T+PY F+Q+W N DD DVV + K  T L   EI  + +  ++   + EA+K
Sbjct: 292 GAIWINREKTTPYEFYQFWINTDDRDVVKYLKYFTFLSQEEIAELEQKMIEAPHLREAQK 351

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGM 350
            +A EITT VH  E+  +A   +   F   I S          + +PTI  +K++     
Sbjct: 352 KLAAEITTFVHSEEDLNQAIKISNALFSGDIASLTAEEIEQGFKDVPTIQATKEDAK--- 408

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKIN 380
            L+  +V++G   S  ++R  + + AI +N
Sbjct: 409 -LVDWLVESGIEPSKRQSREDISNGAIYLN 437


>gi|60593916|pdb|1WQ3|A Chain A, Escherichia Coli Tyrosyl-Trna Synthetase Mutant Comlexed
           With 3-Iodo-L-Tyrosine
 gi|186972908|pdb|2YXN|A Chain A, Structual Basis Of Azido-Tyrosine Recognition By
           Engineered Bacterial Tyrosyl-Trna Synthetase
          Length = 322

 Score =  275 bits (703), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 137/318 (43%), Positives = 197/318 (61%), Gaps = 5/318 (1%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +    G+D TA SLH GHL  L+ L   Q+
Sbjct: 4   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALVCGFDPTADSLHLGHLVPLLCLKRFQQ 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +QE ++KI+   + F+ +  G+  A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDCGENSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDF 184
            NN  W  ++  +  LR+IG  FSVN+M++ E+V+ RL RE Q +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNREDQGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K Y   L +GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 184 ACLNKQYGVVLCIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+ +    K  GK    A+ +
Sbjct: 244 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINALEEEDKNSGK-APRAQYV 302

Query: 302 IATEITTMVHGREEAEKA 319
           +A ++T +VHG E  + A
Sbjct: 303 LAEQVTRLVHGEEGLQAA 320


>gi|328945418|gb|EGG39571.1| tyrosine--tRNA ligase [Streptococcus sanguinis SK1087]
          Length = 419

 Score =  275 bits (702), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 141/384 (36%), Positives = 220/384 (57%), Gaps = 11/384 (2%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L ERG + Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  GHKP 
Sbjct: 8   LKERGLVFQTTDEAALRKALEEGQVSYYSGYDPTADSLHLGHLVAILTSRRLQLAGHKPY 67

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+D  R +   + ++  ++ I+   S F+ +  G   A M+NN  W
Sbjct: 68  ALVGGATGLIGDPSFKDAERSLQTKETVEGWVKSIQDQLSRFLDFEKGDNKAEMVNNYDW 127

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
             SI +ID LR++G +F+VN M+S +SV+SR+  E  +S+ EF Y I+Q YDF  L +N+
Sbjct: 128 FSSISFIDFLRDVGKYFTVNYMMSKDSVKSRI--ETGISYTEFAYQIMQGYDFYVLNQNH 185

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
              LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WLN + 
Sbjct: 186 GVTLQIGGSDQWGNMTAGTELLRRKADKTGHVITVPLITDATGKKFGKSEGNAVWLNPDK 245

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATEITTM 309
           TSPY  +Q+W N+ DAD + F K  T L + EI+ + +      +E  A+K++A E+ ++
Sbjct: 246 TSPYEMYQFWMNVMDADAIRFLKIFTFLSLDEIEEIRQQFEAAPHERLAQKVLAREVVSL 305

Query: 310 VHGREEAEKAATAAMECFDMSIHS-------QHMPTISISKDEVSRGMGLLTLIVKAGFA 362
           VHG+E  ++A     + F  +I +       Q +  +   + +    + ++ L+V AG  
Sbjct: 306 VHGQEAYQEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVQAEDNLNIVELLVTAGVV 365

Query: 363 TSTNEARRHLKSNAIKINNSIISN 386
            S  +AR  +++ AI +N   I +
Sbjct: 366 NSKRQAREDVQNGAIYLNGERIQD 389


>gi|56421338|ref|YP_148656.1| tyrosyl-tRNA synthetase [Geobacillus kaustophilus HTA426]
 gi|81346651|sp|Q5KW48|SYY_GEOKA RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|56381180|dbj|BAD77088.1| tyrosyl-tRNA synthetase (tyrosine--tRNA ligase) [Geobacillus
           kaustophilus HTA426]
          Length = 419

 Score =  275 bits (702), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 154/393 (39%), Positives = 224/393 (56%), Gaps = 16/393 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D L+ L  RG ++Q ++   L  L ++  VT Y G+D TA SLH G+L  ++ L   Q+ 
Sbjct: 2   DLLAELQWRGLVNQTTDEDGLRKLLNEERVTLYCGFDPTADSLHIGNLAAILTLRRFQQA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI+L+GG T +IGDPS +   R +   + ++    +IK     F+ +      A + 
Sbjct: 62  GHRPIALVGGATGLIGDPSGKKSERTLNAKETVEAWSARIKEQLGRFLDFEADGNPAKIK 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W+  +  I  LR++G  FSVN M++ ESV+SR+  E  +SF EF+YM+LQAYDF+ 
Sbjct: 122 NNYDWIGPLDVITFLRDVGKHFSVNYMMAKESVQSRI--ETGISFTEFSYMMLQAYDFLR 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASGTKMGKTLSGAI 245
           L +   CRLQ+GGSDQWGNI  G++L  + K   + F LT PL+T A GTK GKT SG I
Sbjct: 180 LYETEGCRLQIGGSDQWGNITAGLELIRKTKGEARAFGLTIPLVTKADGTKFGKTESGTI 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIA 303
           WL+KE TSPY F+Q+W N DD DV+ + K  T L   EI+ + +   +  E   A+K +A
Sbjct: 240 WLDKEKTSPYEFYQFWINTDDRDVIRYLKYFTFLSKEEIEALEQELREAPEKRAAQKALA 299

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSR------GMGLLTLIV 357
            E+T +VHG E   +A   +   F   I +     I     +V         + L+ L+V
Sbjct: 300 EEVTKLVHGEEALRQAIRISEALFSGDIANLTAAEIEQGFKDVPSFVHEGGDVPLVELLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQ 390
            AG + S  +AR  ++S AI +N      E+LQ
Sbjct: 360 SAGISPSKRQAREDIQSGAIYVN-----GERLQ 387


>gi|317129956|ref|YP_004096238.1| tyrosyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522]
 gi|315474904|gb|ADU31507.1| tyrosyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522]
          Length = 423

 Score =  275 bits (702), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 157/409 (38%), Positives = 229/409 (55%), Gaps = 36/409 (8%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + L  L  RG ++Q+++   L  L ++  VT Y G+D T  SLH GHL  ++ L   Q  
Sbjct: 2   NLLEDLQFRGLVNQVTDEDGLKELLNKEAVTLYCGFDPTGDSLHIGHLLTILTLRRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP++L+GG T +IGDPS +   R +     +++  +KIKG  S F+ +  G+T A ++
Sbjct: 62  GHKPLALVGGATGLIGDPSGKKAERTLNEQNIVEQFSDKIKGQLSRFLDF-KGETSAKLV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W+ S+  ID LR++G  F +N ML+ +SV SR+     +SF EF+YMILQ+YDF E
Sbjct: 121 NNYDWIGSMSVIDFLRDVGKNFGLNYMLAKDSVESRIS--SGISFTEFSYMILQSYDFYE 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDL------GERLKTPKLFALTSPLLTTASGTKMGKT 240
           L KN  C+LQ+GGSDQWGNI  G++L       E  +  K F  T PL+T A GTK GKT
Sbjct: 179 LYKNEGCKLQIGGSDQWGNITAGLELIRKMNGQEEDERAKAFGFTIPLVTKADGTKFGKT 238

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--A 298
             GAIWL+ E TSPY F+Q+  N DD DV+ F K  T L   EI+ +     +  +E  A
Sbjct: 239 EGGAIWLDPEKTSPYEFYQFLLNTDDNDVIKFLKYFTFLSQEEIEALEVEVAERPHERAA 298

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG--------- 349
           +K +A E+T  VH     ++A   +   F      Q      ++ DEV +G         
Sbjct: 299 QKRLAEELTAFVHDEAALKQAKNISTALFSGGDLKQ------LTADEVLQGFKDVPSFTT 352

Query: 350 ---MGLLTLIVKAGFATSTNEARRHLKSNAIKIN-------NSIISNEK 388
              +GL+ L+V AG + S  +AR  + + A+ IN       + ++ NE+
Sbjct: 353 ETNIGLIDLLVNAGISPSKRQAREDISNGAVYINGDRCQELDKVVGNEE 401


>gi|332358495|gb|EGJ36319.1| tyrosine--tRNA ligase [Streptococcus sanguinis SK1056]
          Length = 419

 Score =  275 bits (702), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 141/384 (36%), Positives = 220/384 (57%), Gaps = 11/384 (2%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L ERG + Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  GHKP 
Sbjct: 8   LKERGLVFQTTDEAALRKALEEGQVSYYSGYDPTADSLHLGHLVAILTSRRLQLAGHKPY 67

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+D  R +   + ++  ++ I+   S F+ +  G   A M+NN  W
Sbjct: 68  ALVGGATGLIGDPSFKDAERSLQTKETVEGWVKSIQDQLSRFLDFDKGDNKAEMVNNYDW 127

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
             SI +ID LR++G +F+VN M+S +SV+SR+  E  +S+ EF Y I+Q YDF  L +N+
Sbjct: 128 FSSISFIDFLRDVGKYFTVNYMMSKDSVKSRI--ETGISYTEFAYQIMQGYDFYILNQNH 185

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
              LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WLN + 
Sbjct: 186 GVTLQIGGSDQWGNMTAGTELLRRKADKTGHVITVPLITDATGKKFGKSEGNAVWLNPDK 245

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATEITTM 309
           TSPY  +Q+W N+ DAD + F K  T L + EI+ + +      +E  A+K++A E+ ++
Sbjct: 246 TSPYEMYQFWMNVMDADAIRFLKIFTFLSLDEIEEIRQQFEAAPHERLAQKVLAREVVSL 305

Query: 310 VHGREEAEKAATAAMECFDMSIHS-------QHMPTISISKDEVSRGMGLLTLIVKAGFA 362
           VHG+E  ++A     + F  +I +       Q +  +   + +    + ++ L+V AG  
Sbjct: 306 VHGQEAYQEALNITEQLFAGNIKNLSVQELKQGLRGVPNYQVQAEDNLNIVELLVTAGVV 365

Query: 363 TSTNEARRHLKSNAIKINNSIISN 386
            S  +AR  +++ AI +N   I +
Sbjct: 366 NSKRQAREDVQNGAIYLNGERIQD 389


>gi|304404160|ref|ZP_07385822.1| tyrosyl-tRNA synthetase [Paenibacillus curdlanolyticus YK9]
 gi|304347138|gb|EFM12970.1| tyrosyl-tRNA synthetase [Paenibacillus curdlanolyticus YK9]
          Length = 428

 Score =  274 bits (701), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 150/386 (38%), Positives = 220/386 (56%), Gaps = 18/386 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D L  L  RG +HQ+++   L     +  +T Y G+D TA SLH G L  ++ L   QK 
Sbjct: 12  DLLEDLEYRGLVHQVTHREGLHEKLQKEPITLYCGFDPTADSLHIGSLLPILCLMRFQKA 71

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH PI+L+GGGT +IGDPS R   R +   + +      ++   S F+ + T    A ++
Sbjct: 72  GHNPIALVGGGTGLIGDPSGRTSERSLNTDETVASWTASLQRQLSRFLDFDTQANPAKLV 131

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           +N  WL S+  I  LR++G +F+VN ML+ +SV SRL     +SF EF+YMI+QAYDF  
Sbjct: 132 SNYDWLASMNIISFLRDVGKYFTVNYMLAKDSVDSRLA--NGISFTEFSYMIMQAYDFSV 189

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + +DC LQ+GGSDQWGNI  G+DL  +L   + F LT PL+T + G K GK+ SGAIW
Sbjct: 190 LREQHDCALQIGGSDQWGNITAGLDLIGKLGGGESFGLTMPLVTKSDGKKFGKSESGAIW 249

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM-AKLQG-KEINEAKKIIAT 304
           L+   TS Y F+Q+W N DD+DV+ F K  T L    I  + A+LQ   E   A++ +A 
Sbjct: 250 LDSSKTSVYTFYQFWINTDDSDVIKFLKYFTFLSRERIAELEAELQAHPEKRAAQRELAR 309

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLT 354
           E+T +VHG +    A       F   +            + MPT+ ++ +E++    L+ 
Sbjct: 310 EVTRLVHGADALASAEKITEALFSGDVTQLNEAELVEALEGMPTVVLADEEIA----LMD 365

Query: 355 LIVKAGFATSTNEARRHLKSNAIKIN 380
           L++ A  A S  +AR+ ++S A+ IN
Sbjct: 366 LLIAAKAAPSKRQARQDIESGAVYIN 391


>gi|311746911|ref|ZP_07720696.1| tyrosine--tRNA ligase [Algoriphagus sp. PR1]
 gi|126578600|gb|EAZ82764.1| tyrosine--tRNA ligase [Algoriphagus sp. PR1]
          Length = 430

 Score =  274 bits (701), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 154/436 (35%), Positives = 236/436 (54%), Gaps = 37/436 (8%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           F+  L  RG +  ++   EL+   S+GV +AY+G+D TA SLH GHL  +M L   Q+ G
Sbjct: 4   FIEELRWRGMLQDMT--PELEEHLSKGVASAYLGFDPTADSLHIGHLVGVMTLLHFQRAG 61

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY-GTGKTDALML 126
           HKP +L+GG T +IGDPSF+   R ++  + +  N+  I+   S F+ + G     A ++
Sbjct: 62  HKPFALVGGATGMIGDPSFKSAERNLLNKETLDHNVSCIQNQLSKFLDFSGETNNKAELV 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W+    +++ +R++G   +VN M++ +SV+ RL+    LSF EF+Y ++Q YDF  
Sbjct: 122 NNYDWMSEFSFLEFIRDVGKHITVNYMMAKDSVKRRLEDGNGLSFTEFSYQLIQGYDFYH 181

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L KN +C +Q+GGSDQWGNI+ G +L  R+     FALT PL+T A G+K GKT  G++W
Sbjct: 182 LWKNENCTIQLGGSDQWGNIVTGTELIRRMGGGSAFALTVPLITKADGSKFGKTEGGSVW 241

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKKIIAT 304
           L+ E TSPY F+Q+W N+ D D   + +  TTL    I+ +  A  +       +K IA 
Sbjct: 242 LDPEKTSPYAFYQFWLNVSDEDASKYIRIFTTLDQQTIESLEAAHAEAPHQRALQKEIAK 301

Query: 305 EITTMVHGREEAE-----------KAATAAMECFDMSIHSQ---HMPTISISKDEVSRGM 350
            +T MVHG+EE +           K++T  +   D     Q    +P + +SKDE +   
Sbjct: 302 NVTVMVHGQEELDMAIKASEILFGKSSTEDLASLDERTFLQVFDGVPQVQLSKDEFAGFE 361

Query: 351 GLLTLIVKAGFAT---STNEARRHLKSNAIKIN-------NSIISNEKLQIKLQDFDSTG 400
             L L  +A       S  EAR+ ++   + IN       N+ +S   LQ K        
Sbjct: 362 STLDLFGEATQGVIFKSKGEARKMIQGGGVSINKEKLTDPNAALSCSLLQGKY------- 414

Query: 401 NIKLSFGKKNHIICHL 416
            + +  GKKN+ I  +
Sbjct: 415 -LLIQRGKKNYYIVEI 429


>gi|87121327|ref|ZP_01077217.1| tyrosyl-tRNA synthetase [Marinomonas sp. MED121]
 gi|86163484|gb|EAQ64759.1| tyrosyl-tRNA synthetase [Marinomonas sp. MED121]
          Length = 435

 Score =  274 bits (701), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 153/391 (39%), Positives = 222/391 (56%), Gaps = 19/391 (4%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +D L  L  RG I Q +   EL    ++   T Y G+D TA SLH G L  L++L   Q+
Sbjct: 6   NDLLKDLQNRGLIAQTTAEAELANHLNEASRTLYCGFDPTADSLHIGSLVPLLMLKRFQQ 65

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + + E + K+K   S FI++      A +
Sbjct: 66  AGHKPLALVGGATGLIGDPSFKAAERKLNGPEVVNEWVSKLKVQVSQFIEFNDSANSAEV 125

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDF 184
           +NN  W   +  +D LR++G  FS+N M+  ESV+ R+ RE + +SF EF YMILQ++DF
Sbjct: 126 VNNYDWTKDLNILDFLRDVGKHFSINAMIQKESVKQRINREGEGISFTEFTYMILQSFDF 185

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
            EL +   C LQ+GGSDQWGNI  G +L  R     +F LT PL+T + GTK GKT SG 
Sbjct: 186 AELNRLNGCSLQIGGSDQWGNITGGTELTRRQNGNHVFGLTMPLVTKSDGTKFGKTESGT 245

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK----LQGKEINEAKK 300
           IWL+ + TS Y F+Q+W N  DAD   F K  T L + EID + K     QG+   +A+ 
Sbjct: 246 IWLDAKKTSQYAFFQFWLNTADADAYKFLKYFTFLSVEEIDAIEKADQEAQGRP--QAQA 303

Query: 301 IIATEITTMVHGRE---EAEKAATA--AMECFDMS------IHSQHMPTISISKDEVSRG 349
           I+A E+T +VHG E    AE+   A  + E  D+S      I    +P+       ++  
Sbjct: 304 ILAKEVTKLVHGEEGLAAAERITQALFSGEAADLSEQDLAQIQLDGLPSTEFELSSLTD- 362

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKIN 380
           M L +   +AG AT+  + +  L+ N++ +N
Sbjct: 363 MPLTSFFTEAGLATNGKQVKDALQRNSVFVN 393


>gi|227875725|ref|ZP_03993853.1| tyrosine--tRNA ligase [Mobiluncus mulieris ATCC 35243]
 gi|269976726|ref|ZP_06183702.1| tyrosyl-tRNA synthetase [Mobiluncus mulieris 28-1]
 gi|306819000|ref|ZP_07452717.1| tyrosine--tRNA ligase [Mobiluncus mulieris ATCC 35239]
 gi|307700327|ref|ZP_07637367.1| tyrosine--tRNA ligase [Mobiluncus mulieris FB024-16]
 gi|227843667|gb|EEJ53848.1| tyrosine--tRNA ligase [Mobiluncus mulieris ATCC 35243]
 gi|269935091|gb|EEZ91649.1| tyrosyl-tRNA synthetase [Mobiluncus mulieris 28-1]
 gi|304648193|gb|EFM45501.1| tyrosine--tRNA ligase [Mobiluncus mulieris ATCC 35239]
 gi|307614538|gb|EFN93767.1| tyrosine--tRNA ligase [Mobiluncus mulieris FB024-16]
          Length = 420

 Score =  274 bits (701), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 143/395 (36%), Positives = 224/395 (56%), Gaps = 19/395 (4%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           SD +  L  RG + Q ++   L    ++G VT Y G+D TA+SLH GHL QL+++  LQ 
Sbjct: 2   SDLIDELQWRGLVKQHTDLEALRAALNEGSVTFYCGFDPTAASLHHGHLVQLIMMRHLQL 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH PI+L+GG T +IGDP    E R++   + + E +EK+K     F+ +  G   A M
Sbjct: 62  AGHHPIALVGGATGLIGDPRMTAE-RQLQDKETVSEWVEKLKIQIGKFLDF-DGANPARM 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  W   +  IDLLR++G  F +  ML+ ++V  RLK E+ +S+ EF+Y ILQA DF+
Sbjct: 120 VNNRDWTEPLSAIDLLRDLGKHFRMGTMLAKDAVARRLKSEEGISYTEFSYQILQANDFL 179

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           +L + Y   L+ GG+DQWGN++ G+DL  +++   +  +T+PL+T + GTK GK+  GAI
Sbjct: 180 QLYRKYGATLETGGNDQWGNLVGGMDLIRKVEGADVHVMTTPLITKSDGTKFGKSEGGAI 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIA 303
           WL+ EM SPY F+Q+W N++DADV+ F K  T +   EI+ + +   +      A+K +A
Sbjct: 240 WLDPEMLSPYAFYQFWLNVEDADVIHFLKVFTFMSREEIEDLERQTAENPGARAAQKALA 299

Query: 304 TEITTMVHGREEAEKAATAAMECFD-----------MSIHSQHMPTISISKDEVSRGMGL 352
             +T +VHG EE  +   A+   F            +   +  +P   +   E +    +
Sbjct: 300 EAVTALVHGAEETSRVKAASAALFGSGDLREVNGDTLVAATADLPHAPVKIGETT----I 355

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNE 387
           L L+V +G       A+R + S    INN  +++E
Sbjct: 356 LDLLVTSGLEKGVGAAKRTIASGGAYINNEKVADE 390


>gi|213966317|ref|ZP_03394499.1| tyrosyl-tRNA synthetase [Corynebacterium amycolatum SK46]
 gi|213951023|gb|EEB62423.1| tyrosyl-tRNA synthetase [Corynebacterium amycolatum SK46]
          Length = 434

 Score =  274 bits (701), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 161/418 (38%), Positives = 236/418 (56%), Gaps = 17/418 (4%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           + + +  L  RG I+Q ++   L   C +  +T Y G+D T  SLHAGHL  +++L   Q
Sbjct: 15  EQNIIDELQWRGLINQSTDVDALREAC-ENPITLYCGFDPTGDSLHAGHLVPMIMLRRFQ 73

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQE-IQENIEKIKGIFSSFIKYGTGKTDA 123
             GH PI+L GG T  IGDP  RD   R M SQ+ I+ N+E IKG    FI +  G+  A
Sbjct: 74  LAGHHPIALAGGATGFIGDP--RDVGERSMLSQDAIEHNLEAIKGQLRRFIDF-EGEAPA 130

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            M+NN  W  ++  ID LR++G  FS+N ML  ++V+ RL+ +  +S+ EF+YM+LQ+ D
Sbjct: 131 TMVNNADWTMNMSVIDFLRDVGKNFSLNTMLDRDTVKRRLESD-GISYTEFSYMLLQSND 189

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           +V+L +NYDC LQ+GG DQWGNI+ G+DL  R+   K+  LT PL+T A G K GK+  G
Sbjct: 190 YVQLRRNYDCVLQIGGGDQWGNIVSGVDLNRRIDGAKVHGLTVPLVTDAQGQKFGKSTGG 249

Query: 244 A-IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKK 300
             +WL+ E TSPY+++QY+ N  D+ V+ + +  T L   EI    +A  +     EA++
Sbjct: 250 GKLWLDAEKTSPYSWYQYFLNAGDSVVIDYLRWFTFLTQEEIAEYEVAVAERPFKREAQR 309

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI---SISKDEVS-----RGMGL 352
            +A E+T +VHG E  +    AA   F  +  ++   T    ++S+ EV+          
Sbjct: 310 RLAQEMTNLVHGEEATKAVELAAQALFGRAELTELDETTLAGAVSETEVAEIAEGEPRTA 369

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
           + L+V AG A S  EARR +K      NN  I +E  +   +D      I L  GKKN
Sbjct: 370 VDLLVAAGLAKSKGEARRTIKEGGAYANNQRIEDEAWEPAAEDLLHGKWIVLRRGKKN 427


>gi|223933066|ref|ZP_03625059.1| tyrosyl-tRNA synthetase [Streptococcus suis 89/1591]
 gi|330831970|ref|YP_004400795.1| tyrosyl-tRNA synthetase [Streptococcus suis ST3]
 gi|223898253|gb|EEF64621.1| tyrosyl-tRNA synthetase [Streptococcus suis 89/1591]
 gi|329306193|gb|AEB80609.1| tyrosyl-tRNA synthetase [Streptococcus suis ST3]
          Length = 418

 Score =  274 bits (701), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 144/400 (36%), Positives = 220/400 (55%), Gaps = 26/400 (6%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG + Q ++   L    ++G V+ Y GYD TA SLH GHL  ++    LQ  GHKP 
Sbjct: 7   LKARGLVFQTTDEEALVKALTEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAGHKPY 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+D  R +     +   + KI+G  S F+ +  G   A M+NN  W
Sbjct: 67  ALVGGATGLIGDPSFKDAERSLQTKDTVDGWVTKIQGQLSRFLDFENGDNKAEMVNNYDW 126

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
              I +ID LR++G +++VN M+S +SV+ R+  E  +S+ EF Y I+Q YDF EL   Y
Sbjct: 127 FSDISFIDFLRDVGKYYTVNYMMSKDSVKKRI--ETGISYTEFAYQIMQGYDFYELNDKY 184

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
           +  LQ+GGSDQWGN+  G +L  R        +T PL+T ++G K GK+   A+WL+ + 
Sbjct: 185 NVTLQIGGSDQWGNMTAGTELLRRKADKSGHVMTVPLITDSTGKKFGKSEGNAVWLDADK 244

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATEITTM 309
           TSPY  +Q+W N+ D D V F K  T L + EI  + K      +E  A+KI+A E+ T+
Sbjct: 245 TSPYEMYQFWLNVMDDDAVRFLKIFTFLSLDEIAEIEKQFDAARHERLAQKILAREVVTL 304

Query: 310 VHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIVKA 359
           VHG E   +A     + F  +I +           ++P  ++  ++    + ++ L+V +
Sbjct: 305 VHGEEAYNQALNITEQLFAGNIKNLSAKELKQGLSNVPNYAVQAED---NLNIVELLVTS 361

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDST 399
           G  TS  +AR  +++ AI +N           ++QD D T
Sbjct: 362 GIVTSKRQAREDVQNGAIYVNGE---------RVQDLDYT 392


>gi|290579692|ref|YP_003484084.1| putative tyrosyl-tRNA synthetase [Streptococcus mutans NN2025]
 gi|254996591|dbj|BAH87192.1| putative tyrosyl-tRNA synthetase [Streptococcus mutans NN2025]
          Length = 418

 Score =  274 bits (701), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 147/415 (35%), Positives = 223/415 (53%), Gaps = 17/415 (4%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG + Q ++   L      G V+ Y GYD TA SLH GHL  ++++  LQ  GHKP 
Sbjct: 7   LKARGLVFQTTDEEALKKSLDDGQVSFYTGYDPTADSLHLGHLVPILVMRHLQLVGHKPY 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+D+ R +   + ++  ++ I+     FI +  G   A M+NN  W
Sbjct: 67  ALVGGATGLIGDPSFKDDERSLQTKETVENWVQSIRNQLERFIDFKHGDNKAQMVNNYDW 126

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +  I +ID LR++G +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF  L + +
Sbjct: 127 MGKITFIDFLRDVGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFYVLNQEH 184

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
              LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WL+ + 
Sbjct: 185 AVTLQVGGSDQWGNMTAGTELIRRKANKTAHVITVPLITDATGKKFGKSEGNAVWLDADK 244

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI-DRMAKLQGKEINE-AKKIIATEITTM 309
           TSPY  +Q+W N+ DAD + F K  T L + EI D   K +       A+KI+A E+ T 
Sbjct: 245 TSPYEMYQFWLNVMDADAIRFLKIFTFLSLDEIEDIRVKFEAAPHERLAQKILAKEVVTF 304

Query: 310 VHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIVKA 359
           VHG+   ++A     + F   I S           ++P  ++  ++      ++ L+V A
Sbjct: 305 VHGQTAYQEAVKITEQLFAGHIKSLSAKELKQGLSNVPNYAVKSND---NHNIVELLVTA 361

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           G   S  +AR  L++ AI IN   I +    +  QD        +  GKK + + 
Sbjct: 362 GIVNSKRQAREDLQNGAIYINGERIQDLTYNLSQQDKIDNELTVIRRGKKKYFVL 416


>gi|119944682|ref|YP_942362.1| tyrosyl-tRNA synthetase [Psychromonas ingrahamii 37]
 gi|119863286|gb|ABM02763.1| tyrosyl-tRNA synthetase [Psychromonas ingrahamii 37]
          Length = 423

 Score =  274 bits (701), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 160/407 (39%), Positives = 228/407 (56%), Gaps = 24/407 (5%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L  RG I Q++   EL    S G  T Y G+D TA SLH G L  L+ L   Q  G
Sbjct: 4   LLEDLQARGLIAQMTADEELHEHLSSGCKTLYCGFDPTADSLHIGSLVPLVTLKRFQDAG 63

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKP++L+GG T +IGDPSF+   R++     + +  EKIKG  S+FI++G  +  A ++N
Sbjct: 64  HKPLALVGGATGLIGDPSFKAVERKLNTDDVVADWAEKIKGQVSAFIEFGDRENSAEVVN 123

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQS-LSFLEFNYMILQAYDFVE 186
           N  W+  +  I  LR++G  FSVN M+  ESV+ R+ R+ S +SF EF YM+LQ+YDF  
Sbjct: 124 NLDWIGKMDTISFLRDVGKHFSVNAMIQKESVKQRIDRDGSGMSFTEFTYMLLQSYDFAA 183

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L K   C LQ+GGSDQWGNI  GIDL  R+   K+F LT PL+T + GTK GKT +G IW
Sbjct: 184 LNKANGCSLQIGGSDQWGNITGGIDLTRRMNQEKVFGLTLPLVTKSDGTKFGKTEAGTIW 243

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK----LQGKEINEAKKII 302
           L+   TSPY F+Q+W    DADV  F    T L + EI  + +    +QG+   E + I+
Sbjct: 244 LDAAKTSPYAFFQFWITTLDADVYKFLHYFTFLSVEEIAAIEENDKTIQGRP--EGQNIL 301

Query: 303 ATEITTMVHGRE---EAEKAATA-------AMECFDMSIHSQH-MPTISISKDEVSRGMG 351
           A ++T MVHG +    A++   A       A++  D++  +Q  +P   +   E      
Sbjct: 302 AQQVTKMVHGEQGLGSAQRITEALFSGDLSALDESDLAQLAQDGLPATFVEGTEKP---- 357

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
           L+ L+     A S   AR  +K+ A+ IN    ++   ++ LQ  D+
Sbjct: 358 LVELLTSCELAKSNKMAREFIKNGAVSINGEKQTDS--EVILQKLDA 402


>gi|311031298|ref|ZP_07709388.1| tyrosyl-tRNA synthetase [Bacillus sp. m3-13]
          Length = 419

 Score =  274 bits (701), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 153/396 (38%), Positives = 222/396 (56%), Gaps = 26/396 (6%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L  RG ++Q+++   L  L S+  V  Y G+D T  SLH GHL  ++ L   Q+ G
Sbjct: 3   LLEDLQFRGLVNQVTDEEGLTKLLSEEKVKLYSGFDPTGDSLHIGHLLPILTLRRFQQAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H PI+L+GG T +IGDPS +   R +  S  + E   +IKG  S F+ +   +  A++ N
Sbjct: 63  HHPIALVGGATGLIGDPSGKKAERTLNTSDIVVEWSNRIKGQLSQFLDFTAAENPAVIAN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W+  +  I  LR++G  F +N ML+ +SV+SR+  E  +S+ EF+YMILQ+ DF+ L
Sbjct: 123 NHDWIGEMNVISFLRDVGKNFGLNYMLAKDSVQSRI--ESGISYTEFSYMILQSLDFLHL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERL-KTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
            +  +C+LQ+GGSDQWGNI  G++L  +  +  K F LT PL+T A GTK GKT  GAIW
Sbjct: 181 YRGQNCKLQIGGSDQWGNITAGMELIRKSEENAKAFGLTIPLVTKADGTKFGKTEGGAIW 240

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIAT 304
           L++E TSPY F+Q+W N DD DVV + K  T L  SEI  + K   +  E   A K +A 
Sbjct: 241 LDREKTSPYEFYQFWINTDDRDVVKYLKFFTFLSHSEILELEKELQEAPEKRSAHKRLAE 300

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG--------------M 350
           E+T +VHG    E+A   +   F  SI         +S DE+ +G              +
Sbjct: 301 EVTKLVHGEAALEQAIRISKALFSGSIS-------ELSADEIKQGFADVPSFTVENEEQL 353

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISN 386
            L+ L+V +  A S  +AR  + + AI IN   + +
Sbjct: 354 ALVELLVASKIAPSKRQAREDITNGAISINGEKVQD 389


>gi|262091744|gb|ACY25333.1| tyrosyl-tRNA synthetase [uncultured actinobacterium]
          Length = 425

 Score =  274 bits (701), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 143/383 (37%), Positives = 217/383 (56%), Gaps = 9/383 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D +   + RG IH  ++  +L    +   ++AY+G+D T+ SLH G+L   + L   Q  
Sbjct: 6   DVVLEFASRGLIHDSTDRADLTKRSTTSQMSAYVGFDPTSDSLHVGNLLGQISLRRFQML 65

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+P+ L GG T ++GDPS R E R ++ +  +  N+  IKG     + + +G   A+++
Sbjct: 66  GHRPVVLAGGATGMVGDPSGRSEERNLLDADSLAHNVSCIKGQLERILDFDSGANKAVLV 125

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           +N TW   +  +D LR++G + +VN+M++ +SV+SR+     LSF EF+YM+LQA DF  
Sbjct: 126 DNATWTKDVPVLDFLRDVGKYITVNQMMAKDSVKSRISDGNGLSFTEFSYMLLQANDFRH 185

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L ++ DC +QMGGSDQWGNI  GIDL  +      F LT PL+T + GTK GKT  GA+W
Sbjct: 186 LCEHLDCEMQMGGSDQWGNITAGIDLIRKRLGRDSFGLTWPLVTKSDGTKFGKTADGAVW 245

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKKIIAT 304
           L+ + TSPY F Q+W  + D D+     + +  PM EI  +   Q    E   A++ +A 
Sbjct: 246 LDAKRTSPYQFRQFWMQVTDIDIERMLPQFSLRPMEEIASILNEQRLSPEKRVAQRTLAN 305

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVS-RGMGLLTL------IV 357
           EIT+M+HG E A  A  AA   F  +       T+ +   EV+   MG   L      +V
Sbjct: 306 EITSMLHGEESANAAEQAADVLFGANPVFASEATLKLIAQEVAVTQMGTAVLHDAVGVLV 365

Query: 358 KAGFATSTNEARRHLKSNAIKIN 380
             G A+S +EARR L+  +++ N
Sbjct: 366 TTGLASSNSEARRLLQQRSVRAN 388


>gi|120434482|ref|YP_860182.1| tyrosyl-tRNA synthetase [Gramella forsetii KT0803]
 gi|117576632|emb|CAL65101.1| tyrosyl-tRNA synthetase [Gramella forsetii KT0803]
          Length = 431

 Score =  274 bits (701), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 156/431 (36%), Positives = 232/431 (53%), Gaps = 23/431 (5%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           + +F+  L+ RG +H  S P   + L S+ + +AY+G D TA SLH GHL  +M+L   Q
Sbjct: 2   EKNFVEELNWRGMLHD-SMPGTEEHL-SKDMRSAYVGIDPTADSLHIGHLVGVMMLRHFQ 59

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG-KTDA 123
             GHKP +L+GG T +IGDPS +   R ++    ++ N   +K   S F+ + +  +  A
Sbjct: 60  LAGHKPYALVGGATGMIGDPSGKSAERNLLDEATLRHNQNSLKEQLSRFLDFESDIQNAA 119

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQA 181
           +++NN  W+    ++D +R++G   +VN M++ +SV+ RL  E  + +SF EF Y ++Q 
Sbjct: 120 VLVNNYDWMKEFSFLDFIRDVGKHITVNYMMAKDSVKKRLSSESAEGMSFTEFTYQMVQG 179

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
           YDF+ L +  +C LQMGGSDQWGNI  G +L  R+   K +ALT PL+T A GTK GKT 
Sbjct: 180 YDFLHLFREKNCTLQMGGSDQWGNITTGTELIRRIGDGKGYALTCPLITKADGTKFGKTE 239

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAK 299
            G IWL+   TSPY F+QYW N  D D   + K  T L   EI+ +     +     E +
Sbjct: 240 GGNIWLDANRTSPYKFYQYWLNTSDEDAEKYIKIFTFLSKGEIESLITKHREAPHQRELQ 299

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDE 345
           K++  E+TTMVH   E E A  A+   F  S                 + +P   +S  +
Sbjct: 300 KVLGKEVTTMVHSEAEFENALAASEVLFGKSTADDFRKLDEATFLDIFEGVPQAEVSMSD 359

Query: 346 VSRGMGLL-TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           +  G+ ++  L  K  F  S  EARR LK N++ +N   +  E   I   D  +   + L
Sbjct: 360 IEEGLDMIAALSAKTNFLNSNGEARRALKENSVSVNKEKVK-EDYTITSSDLINNKYVIL 418

Query: 405 SFGKKNHIICH 415
           + GKKN  I H
Sbjct: 419 NKGKKNTYIIH 429


>gi|163753361|ref|ZP_02160485.1| putative tyrosyl-tRNA synthetase 1 [Kordia algicida OT-1]
 gi|161327093|gb|EDP98418.1| putative tyrosyl-tRNA synthetase 1 [Kordia algicida OT-1]
          Length = 434

 Score =  274 bits (700), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 153/435 (35%), Positives = 234/435 (53%), Gaps = 25/435 (5%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L  RG IH I    E  +  ++ + TAYIG+D T+ SLH G L  ++LL  L K
Sbjct: 3   SNLVEELRWRGMIHDIMPGTEEQL--NKEMTTAYIGFDPTSDSLHIGSLVPIILLMHLHK 60

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA-L 124
            GHKPI+L+GG T +IGDPS + + R ++    +  N+  IK + S F+ +G  + +A +
Sbjct: 61  AGHKPIALVGGATGMIGDPSGKSDERNLLTEDILNHNVAGIKRVLSRFLDFGGSEANAPI 120

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYD 183
           ++NN  W+    +ID  R++G   +VN M++ +SV+ RL  E   +SF EF Y ++Q YD
Sbjct: 121 LVNNYDWMKDFSFIDFARDVGKRITVNYMMAKDSVKKRLSDEGNGMSFTEFTYQLIQGYD 180

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT---PKLFALTSPLLTTASGTKMGKT 240
           F  L K ++C LQMGGSDQWGNI  G +L  R+ T    K +A+T PL+T A G+K GKT
Sbjct: 181 FYHLHKAHNCLLQMGGSDQWGNITTGTELVRRMNTEEAAKAYAMTCPLITKADGSKFGKT 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEA 298
             G +WL+ + TS Y F+Q+W N  DAD   + K  T L    ID +     +       
Sbjct: 241 AGGNVWLDADKTSVYKFYQFWLNTSDADAEKYIKIFTFLDKETIDALIAEHKEAPHTRAL 300

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKD 344
           +K +A E+TT+VH +E+ E A  A    F  S                   +P   I + 
Sbjct: 301 QKRLAEEVTTLVHSKEDLENAQKATQILFGKSTSEDLKQLDEQTFMDVFDGVPQAEIERA 360

Query: 345 EVSRGMGLL-TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
           ++  G+ ++  L  K  F  S  EARR LK N++ +N + +  E  +I   D  +   + 
Sbjct: 361 DIEEGLDMIAALAAKTNFLASNGEARRALKENSVAVNKTKVK-EDYKITTSDLINDKFVT 419

Query: 404 LSFGKKNHIICHLCG 418
           +  G+K + +  + G
Sbjct: 420 IQRGRKKNFLLIVKG 434


>gi|90415201|ref|ZP_01223135.1| tyrosyl-tRNA synthetase [marine gamma proteobacterium HTCC2207]
 gi|90332524|gb|EAS47694.1| tyrosyl-tRNA synthetase [marine gamma proteobacterium HTCC2207]
          Length = 455

 Score =  274 bits (700), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 161/420 (38%), Positives = 232/420 (55%), Gaps = 25/420 (5%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ ++ L +RG + Q+S   EL+    Q     Y G+D TA SLH GHL  L++L   Q+
Sbjct: 27  SEIINQLRQRGLVAQVSADNELEEHLDQPRAL-YCGFDPTADSLHLGHLVPLLVLKRFQE 85

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH PI+L+GG T +IGDPSF+   R++     I    +KIKG  S FI +  G   A++
Sbjct: 86  AGHTPIALVGGATGMIGDPSFKAAERKLNTPDVISSWADKIKGQVSQFIDFDCGANSAVV 145

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQS-LSFLEFNYMILQAYDF 184
            NN  W   +  ++ LR++G  FSVN M++ ESV+ RL RE S +SF EF+Y +LQ  DF
Sbjct: 146 ANNLDWTEKMSALEFLRDVGKHFSVNNMINKESVKLRLDREGSGISFTEFSYALLQGMDF 205

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
            EL + ++C LQ+GGSDQWGNI+ GIDL  R    + FALT PL+T + GTK GKT +GA
Sbjct: 206 AELNRRHNCTLQVGGSDQWGNIVGGIDLARRQNKSQCFALTVPLITKSDGTKFGKTEAGA 265

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA----KLQGKEINEAKK 300
           +WL+   TSP  F+Q+W N+ DADV  F +  T L + EI  +     K +GK   +A  
Sbjct: 266 VWLDPSKTSPLAFYQFWLNVADADVYKFLRYFTFLSLEEISAVEEADNKAEGKPQGQA-- 323

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQ------------HMPTISISKDEVSR 348
           ++A E T +VHG E+   AA    E       +Q             MP+  +   E++ 
Sbjct: 324 VLAREATRLVHG-EDGLAAALRITEALFTGDPNQLPESDFEQLCLDGMPSSELPVAELA- 381

Query: 349 GMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGK 408
              L +L++  G A    E +  L   ++ IN   I  E+     + FDS+  +   FG+
Sbjct: 382 DKPLTSLLMDCGMAKVGREVKDALGRQSVFINGRAIGAEQNMKAAELFDSSNAL---FGR 438


>gi|312139861|ref|YP_004007197.1| tyrosine-tRNA ligase tyrs [Rhodococcus equi 103S]
 gi|311889200|emb|CBH48514.1| tyrosine-tRNA ligase TyrS [Rhodococcus equi 103S]
          Length = 425

 Score =  274 bits (700), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 154/416 (37%), Positives = 233/416 (56%), Gaps = 15/416 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + L  L+ RG I Q ++   L      G VT Y G+D T  SLHAGHL  L+ L   Q+ 
Sbjct: 4   NILDELTWRGLIAQSTDLDALRRETEAGPVTLYAGFDPTGPSLHAGHLVPLLALKRFQRA 63

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQE-IQENIEKIKGIFSSFIKYGTGKTDALM 125
           GH+PI L GG T +IGDP  RD   R+M + + + +  ++I+     F+ +    T A++
Sbjct: 64  GHRPIVLAGGATGMIGDP--RDVGERVMNTADTVADWADRIRSQLERFVDFDESPTGAVI 121

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
            NN  W   +  ID LR+IG  FSVN ML+ ++V+ RL+ +  +S+ EF+YM+LQA DFV
Sbjct: 122 ENNANWTSKLTAIDFLRDIGKHFSVNVMLARDTVKRRLETD-GISYTEFSYMLLQANDFV 180

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK-TLSGA 244
            L +NY C LQ+GGSDQWGNII G+DL  +L    + A+T PL+T+A G K GK T  G+
Sbjct: 181 HLRRNYGCTLQVGGSDQWGNIIAGVDLNRKLDGESVHAMTVPLVTSADGKKFGKSTGGGS 240

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKKII 302
           +WL+ EMTSPY ++QY+ N  DADVV + +  T L   E+  +  A  +  +  EA++ +
Sbjct: 241 LWLDPEMTSPYAWYQYFVNTGDADVVKYLRWFTFLTQEELAELEVATAERPQAREAQRRL 300

Query: 303 ATEITTMVHGREEAEKAATAAMECF--------DMSIHSQHMPTISISKDEVSRGMGLLT 354
           A E+TT+VHG+   +    A+   F        D S  +  +   SI++        ++ 
Sbjct: 301 AAEMTTLVHGQANTDAVELASKALFGRAELTDLDESTLAAALKEASIAEVAGDAPRTIVD 360

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
           L+V +G + S   ARR +K     +NN  + ++    +  D      + +  G+KN
Sbjct: 361 LLVASGLSESKGAARRAVKEGGAYVNNQRVESDDWTPESSDLLHGRWLVIRRGRKN 416


>gi|97537355|sp|O83806|SYY_TREPA RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
          Length = 409

 Score =  274 bits (700), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 149/404 (36%), Positives = 221/404 (54%), Gaps = 7/404 (1%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L+ L  RGFI Q ++   L      G +T Y+G D T SSLH GH+  +  L  L   GH
Sbjct: 5   LARLQARGFIRQCTDLSALSARMDAGPLTFYVGVDPTGSSLHVGHMLPMFALKHLCDAGH 64

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           +   L+GGGT+ IGDPS +   R+M+    +      I      F+ +         +NN
Sbjct: 65  RGCVLIGGGTARIGDPSGKTSMRKMLDYATLDAYAGAIVAQLDHFLSFD--HRHVFYVNN 122

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL  + YID LRE+G+ FSVN+ML++E+ + RL  E  LSFLEFNY +LQ+YDF+ L+
Sbjct: 123 RDWLAHLNYIDFLREVGAHFSVNKMLTYEAYKKRL--ETGLSFLEFNYQLLQSYDFLTLS 180

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
             Y   LQ+GG DQWGNI+ G DL  R++   +  LT PL+T A G KMGKT  GA++L+
Sbjct: 181 DRYAVELQIGGDDQWGNIVAGADLVRRVRGKTVHGLTFPLITRADGQKMGKTEQGALFLD 240

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITT 308
             + SPY+F+QYWRN  D DV  F    T L + +++ +   QG  IN AK+++A E+T 
Sbjct: 241 PALVSPYDFFQYWRNTPDEDVRRFLLLFTFLSVRDVEAILT-QG--INCAKELLAYEVTR 297

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
           ++HG   A+ A   A   F        +PT  +++  +  G+ +  L V+ G  T+ ++A
Sbjct: 298 LMHGTAVAQVALQGARAAFGGCGDKCALPTFELTQCTLQVGIKVTDLFVQVGLCTTKSDA 357

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           RR +      +    +++    I     D  G + +  GKK  +
Sbjct: 358 RRLIAQGGAFVGLQRVADIGAVIDQSALDLDGTVIVRAGKKRVV 401


>gi|97202191|sp|Q8DS44|SYY_STRMU RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
          Length = 418

 Score =  274 bits (700), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 147/415 (35%), Positives = 223/415 (53%), Gaps = 17/415 (4%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG + Q ++   L      G V+ Y GYD TA SLH GHL  ++++  LQ  GHKP 
Sbjct: 7   LKARGLVFQTTDEEALKKSLDDGQVSFYTGYDPTADSLHLGHLVPILVMRHLQLAGHKPY 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+D+ R +   + ++  ++ I+     FI +  G   A M+NN  W
Sbjct: 67  ALVGGATGLIGDPSFKDDERSLQTKETVKNWVQSIRSQLERFIDFKHGDNKAQMVNNYDW 126

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +  I +ID LR++G +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF  L + +
Sbjct: 127 MGKITFIDFLRDVGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFYVLNQEH 184

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
              LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WL+ + 
Sbjct: 185 AVTLQVGGSDQWGNMTAGTELIRRKANKTAHVITVPLITDATGKKFGKSEGNAVWLDADK 244

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI-DRMAKLQGKEINE-AKKIIATEITTM 309
           TSPY  +Q+W N+ DAD + F K  T L + EI D   K +       A+KI+A E+ T 
Sbjct: 245 TSPYEMYQFWLNVMDADAIRFLKIFTFLSLDEIEDIRVKFEAAPHERLAQKILAKEVVTF 304

Query: 310 VHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIVKA 359
           VHG+   ++A     + F   I S           ++P  ++  ++      ++ L+V A
Sbjct: 305 VHGQTAYQEAVKITEQLFAGHIKSLSAKELKQGLSNVPNYAVKSND---NHNIVELLVTA 361

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           G   S  +AR  L++ AI IN   I +    +  QD        +  GKK + + 
Sbjct: 362 GIVNSKRQAREDLQNGAIYINGERIQDLTYNLSQQDKIDNELTVIRRGKKKYFVL 416


>gi|322410926|gb|EFY01834.1| tyrosyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           dysgalactiae ATCC 27957]
          Length = 419

 Score =  274 bits (700), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 147/414 (35%), Positives = 229/414 (55%), Gaps = 15/414 (3%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG + Q ++   L    ++G V+ Y GYD TA SLH GHL  ++    LQ  GHKP 
Sbjct: 7   LKARGLVFQTTDEEALVKALTEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAGHKPY 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+D  R +   + + E  +KIKG  S+F+ +  G   A ++NN  W
Sbjct: 67  ALVGGATGLIGDPSFKDAERSLQTKETVLEWSDKIKGQLSTFLDFENGDNKAELVNNYDW 126

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
              I +ID LR++G +F+VN M+S +SV+ R+  E  +S+ EF Y I+Q YDF EL   +
Sbjct: 127 FSQISFIDFLRDVGKYFTVNYMMSKDSVKKRI--ETGISYTEFAYQIMQGYDFYELNNKH 184

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
           +  LQ+GGSDQWGN+  G +L  R        +T PL+T ++G K GK+   A+WL+ + 
Sbjct: 185 NITLQIGGSDQWGNMTAGTELLRRKADKTCHVMTVPLITDSTGKKFGKSEGNAVWLDADK 244

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATEITTM 309
           TSPY  +Q+W N+ D D V F K  T L ++EI  +        +E  A+K +A E+ T+
Sbjct: 245 TSPYEMYQFWLNVMDDDAVRFLKIFTFLSLNEIADIENQFNAARHERLAQKTLAREVVTL 304

Query: 310 VHGREEAEKAATAAMECFDMSIHS-------QHMPTISISKDEVSRGMGLLTLIVKAGFA 362
           VHG E  ++A     + F  ++ +       Q +  +     + +  + L+ ++V AG +
Sbjct: 305 VHGEEAYKQALNITEQLFAGNVQNLSANELKQGLSNVPNYHVQSADSLNLVDMLVTAGIS 364

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN--IKLSFGKKNHIIC 414
            S  +AR  +++ AI IN   +  ++L   L D D   N    +  GKK + + 
Sbjct: 365 PSKRQAREDVQNGAIYINGERV--QELDYTLSDTDKIDNQLTVVRRGKKKYAVL 416


>gi|24380335|ref|NP_722290.1| tyrosyl-tRNA synthetase [Streptococcus mutans UA159]
 gi|24378352|gb|AAN59596.1|AE015022_3 putative tyrosyl-tRNA synthetase [Streptococcus mutans UA159]
          Length = 422

 Score =  273 bits (699), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 147/415 (35%), Positives = 223/415 (53%), Gaps = 17/415 (4%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG + Q ++   L      G V+ Y GYD TA SLH GHL  ++++  LQ  GHKP 
Sbjct: 11  LKARGLVFQTTDEEALKKSLDDGQVSFYTGYDPTADSLHLGHLVPILVMRHLQLAGHKPY 70

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+D+ R +   + ++  ++ I+     FI +  G   A M+NN  W
Sbjct: 71  ALVGGATGLIGDPSFKDDERSLQTKETVKNWVQSIRSQLERFIDFKHGDNKAQMVNNYDW 130

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +  I +ID LR++G +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF  L + +
Sbjct: 131 MGKITFIDFLRDVGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFYVLNQEH 188

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
              LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WL+ + 
Sbjct: 189 AVTLQVGGSDQWGNMTAGTELIRRKANKTAHVITVPLITDATGKKFGKSEGNAVWLDADK 248

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI-DRMAKLQGKEINE-AKKIIATEITTM 309
           TSPY  +Q+W N+ DAD + F K  T L + EI D   K +       A+KI+A E+ T 
Sbjct: 249 TSPYEMYQFWLNVMDADAIRFLKIFTFLSLDEIEDIRVKFEAAPHERLAQKILAKEVVTF 308

Query: 310 VHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIVKA 359
           VHG+   ++A     + F   I S           ++P  ++  ++      ++ L+V A
Sbjct: 309 VHGQTAYQEAVKITEQLFAGHIKSLSAKELKQGLSNVPNYAVKSND---NHNIVELLVTA 365

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           G   S  +AR  L++ AI IN   I +    +  QD        +  GKK + + 
Sbjct: 366 GIVNSKRQAREDLQNGAIYINGERIQDLTYNLSQQDKIDNELTVIRRGKKKYFVL 420


>gi|296119701|ref|ZP_06838259.1| tyrosine--tRNA ligase [Corynebacterium ammoniagenes DSM 20306]
 gi|295967584|gb|EFG80851.1| tyrosine--tRNA ligase [Corynebacterium ammoniagenes DSM 20306]
          Length = 421

 Score =  273 bits (699), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 160/416 (38%), Positives = 232/416 (55%), Gaps = 17/416 (4%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I+Q ++   L   C Q +   Y+G+D T  SLHAGHL  +++L   Q+ GHKP+
Sbjct: 7   LQWRGLINQSTDIDALREACEQPIAL-YVGFDPTGDSLHAGHLVPMIMLRRFQEAGHKPL 65

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQ-EIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           +L GG T  IGDP  RD   R M SQ EI  N+E IK     F+ +  G   A+M+NN  
Sbjct: 66  ALAGGATGFIGDP--RDVGERSMLSQDEIDNNLEAIKKQLRQFVDF-DGDNPAIMVNNAD 122

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           W  ++  ID LR++G  FS+N ML  ++V+ RL+ +  +S+ EF+YM+LQA DFV+L + 
Sbjct: 123 WTMNMSVIDFLRDVGKNFSLNTMLDRDTVKRRLETD-GISYTEFSYMLLQANDFVQLQRK 181

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK-TLSGAIWLNK 249
           YDC LQ+GG DQWGNI+ G+DL  R+   K  ALT PL+T A G K GK T  G +WL+ 
Sbjct: 182 YDCVLQVGGGDQWGNIVSGVDLNRRVDGVKAHALTCPLVTDAQGQKFGKSTGGGKLWLDP 241

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIATEIT 307
           E TS Y+++QY+ N  D+ V+ + +  T L   EI   AK   +E     A++ +A E+T
Sbjct: 242 EKTSAYSWYQYFLNAGDSVVIDYLRWFTFLNQEEIAEYAKAVEEEPFKRAAQRRLAQEMT 301

Query: 308 TMVHGREEAEKAATAAMECF---DMSIHSQHMPTISISKDEVSR-----GMGLLTLIVKA 359
            +VHG E  +    AA   F   ++S   +     ++S+  V+        G++ L+V +
Sbjct: 302 NLVHGNEATQAVELAAQALFGRAELSDLDEKTLEGALSETNVAELGDDDSFGIVDLLVAS 361

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           G A S   ARR +K     +NN  I ++       DF     + +  GKKN    H
Sbjct: 362 GLADSKGAARRTIKEGGAYVNNQRIESDDWTPAEDDFLHGAWLVMRRGKKNFAGIH 417


>gi|15639820|ref|NP_219270.1| tyrosyl-tRNA synthetase (tyrS) [Treponema pallidum subsp. pallidum
           str. Nichols]
 gi|189026058|ref|YP_001933830.1| tyrosyl-tRNA synthetase [Treponema pallidum subsp. pallidum SS14]
 gi|3323143|gb|AAC65798.1| tyrosyl-tRNA synthetase (tyrS) [Treponema pallidum subsp. pallidum
           str. Nichols]
 gi|189018633|gb|ACD71251.1| tyrosyl-tRNA synthetase [Treponema pallidum subsp. pallidum SS14]
 gi|291060191|gb|ADD72926.1| tyrosyl-tRNA synthetase [Treponema pallidum subsp. pallidum str.
           Chicago]
          Length = 416

 Score =  273 bits (699), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 149/404 (36%), Positives = 221/404 (54%), Gaps = 7/404 (1%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L+ L  RGFI Q ++   L      G +T Y+G D T SSLH GH+  +  L  L   GH
Sbjct: 12  LARLQARGFIRQCTDLSALSARMDAGPLTFYVGVDPTGSSLHVGHMLPMFALKHLCDAGH 71

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           +   L+GGGT+ IGDPS +   R+M+    +      I      F+ +         +NN
Sbjct: 72  RGCVLIGGGTARIGDPSGKTSMRKMLDYATLDAYAGAIVAQLDHFLSFD--HRHVFYVNN 129

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL  + YID LRE+G+ FSVN+ML++E+ + RL  E  LSFLEFNY +LQ+YDF+ L+
Sbjct: 130 RDWLAHLNYIDFLREVGAHFSVNKMLTYEAYKKRL--ETGLSFLEFNYQLLQSYDFLTLS 187

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
             Y   LQ+GG DQWGNI+ G DL  R++   +  LT PL+T A G KMGKT  GA++L+
Sbjct: 188 DRYAVELQIGGDDQWGNIVAGADLVRRVRGKTVHGLTFPLITRADGQKMGKTEQGALFLD 247

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITT 308
             + SPY+F+QYWRN  D DV  F    T L + +++ +   QG  IN AK+++A E+T 
Sbjct: 248 PALVSPYDFFQYWRNTPDEDVRRFLLLFTFLSVRDVEAILT-QG--INCAKELLAYEVTR 304

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
           ++HG   A+ A   A   F        +PT  +++  +  G+ +  L V+ G  T+ ++A
Sbjct: 305 LMHGTAVAQVALQGARAAFGGCGDKCALPTFELTQCTLQVGIKVTDLFVQVGLCTTKSDA 364

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           RR +      +    +++    I     D  G + +  GKK  +
Sbjct: 365 RRLIAQGGAFVGLQRVADIGAVIDQSALDLDGTVIVRAGKKRVV 408


>gi|119960707|ref|YP_947409.1| tyrosyl-tRNA synthetase [Arthrobacter aurescens TC1]
 gi|119947566|gb|ABM06477.1| tyrosyl-tRNA synthetase [Arthrobacter aurescens TC1]
          Length = 436

 Score =  273 bits (699), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 152/423 (35%), Positives = 242/423 (57%), Gaps = 22/423 (5%)

Query: 2   PAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
           PAF ++    L  RG +H  ++  EL+ L +   +T Y G+D TA SLH G+L QL+++ 
Sbjct: 14  PAF-ANVWQELKWRGLVHVSTDETELEKLLAGDPITYYCGFDPTAPSLHLGNLVQLLVMR 72

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQE-IQENIEKIKGIFSSFIKYGTGK 120
            LQ  GHKP+ L+GG T +IGDP  R  + R + +++ + E +  ++G    F+ +  G+
Sbjct: 73  RLQLAGHKPLGLVGGSTGLIGDP--RPTAERTLNTKDTVAEWVGYLQGQVRRFLSF-EGE 129

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
             A M+NN  W   +  ID LREIG  F V  ML  ++V SRL  ++ +S+ EF+Y ILQ
Sbjct: 130 NPARMVNNLDWTAPLSAIDFLREIGKHFRVGTMLRKDAVASRLSSDEGISYTEFSYQILQ 189

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
             D+++L ++Y C LQ GGSDQWGN+  G +L  +++   + AL +PL+T + GTK GK+
Sbjct: 190 GMDYLQLFRDYGCALQTGGSDQWGNLTSGTELIRKVEGKSVHALGTPLITNSDGTKFGKS 249

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE--INEA 298
              AIWL+ +M SPY F+Q+W N  DADVV   K  T L  +EI+ + +   +     E 
Sbjct: 250 EGNAIWLDPDMCSPYTFYQFWLNTADADVVDRLKVFTFLSRAEIEALGQAVEERPFAREG 309

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECF---DMSI--------HSQHMPTISISKDEVS 347
           +K +A E+T++VHG +  EK   A+   F   D+++         +  +P+ +I  D   
Sbjct: 310 QKKLAFEVTSLVHGVDATEKVIAASAALFGNGDLAVLDERTLEAATAELPSATIGAD--- 366

Query: 348 RGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFG 407
            G+G++ L+V +G + S + ARR +      +NN+ +S+    I  ++      + L  G
Sbjct: 367 -GLGIIDLLVASGLSDSKSAARRTVGEGGAYVNNTKVSDPDAVIAREELLHGRYLLLRRG 425

Query: 408 KKN 410
           KKN
Sbjct: 426 KKN 428


>gi|135196|sp|P04077|SYY_BACCA RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|143793|gb|AAA22877.1| tyrosyl-tRNA synthetase [Bacillus caldotenax]
          Length = 419

 Score =  273 bits (699), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 153/393 (38%), Positives = 224/393 (56%), Gaps = 16/393 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D L+ L  RG ++Q ++   L  L ++  VT Y G+D TA SLH G+L  ++ L   Q+ 
Sbjct: 2   DLLAELQWRGLVNQTTDEDGLRKLLNEERVTLYCGFDPTADSLHIGNLAAILTLRRFQQA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI+L+GG T +IGDPS +   R +   + ++    +IK     F+ +      A + 
Sbjct: 62  GHRPIALVGGATGLIGDPSGKKSERTLNAKETVEAWSARIKEQLGRFLDFEADGNPAKIK 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W+  +  I  LR++G  FSVN M++ ESV+SR+  E  +SF EF+YM+LQAYDF+ 
Sbjct: 122 NNYDWIGPLDVITFLRDVGKHFSVNYMMAKESVQSRI--ETGISFTEFSYMMLQAYDFLR 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASGTKMGKTLSGAI 245
           L +   CRLQ+GGSDQWGNI  G++L  + K   + F LT PL+T A GTK GKT SG I
Sbjct: 180 LYETEGCRLQIGGSDQWGNITAGLELIRKTKGEARAFGLTIPLVTKADGTKFGKTESGTI 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIA 303
           WL+KE TSPY F+Q+W N DD DV+ + K  T L   EI+ + +   +  E   A+K +A
Sbjct: 240 WLDKEKTSPYEFYQFWINTDDRDVIRYLKYFTFLSKEEIEALEQELREAPEKRAAQKALA 299

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSR------GMGLLTLIV 357
            E+T +VHG E   +A   +   F   I +     I     +V         + L+ L+V
Sbjct: 300 EEVTKLVHGEEALRQAIRISEALFSGDIANLTAAEIEQGFKDVPSFVHEGGDVPLVELLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQ 390
            AG + S  +AR  +++ AI +N      E+LQ
Sbjct: 360 SAGISPSKRQAREDIQNGAIYVN-----GERLQ 387


>gi|89893035|ref|YP_516522.1| hypothetical protein DSY0289 [Desulfitobacterium hafniense Y51]
 gi|123280260|sp|Q251G4|SYY_DESHY RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|89332483|dbj|BAE82078.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 420

 Score =  273 bits (699), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 157/426 (36%), Positives = 238/426 (55%), Gaps = 22/426 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + L  L  RG ++Q ++   L     +  +T Y G+D TA SLH GHL  +++L   Q  
Sbjct: 2   NILDDLKARGLVYQTTDEEALYKRL-ESPMTLYCGFDPTADSLHIGHLLPVLMLRRFQLA 60

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH PI+L+GGGT +IGDPS +   R +  ++ +QE   +IK   S F+ +      A+M 
Sbjct: 61  GHCPIALVGGGTGLIGDPSGKTSERTLNPTEVVQEWANRIKEQLSCFLDFEGVGNPAIMA 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL +I  I+ LR+IG  FS+  ML+ ESV SR+ R   +SF EF+Y ILQ+YDF++
Sbjct: 121 NNYEWLGTINVIEFLRDIGKNFSLGSMLAKESVESRMSR--GISFTEFSYQILQSYDFLK 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERL---KTPKLFALTSPLLTTASGTKMGKTLSG 243
           L + Y C +Q+GGSDQWGNI  G DL  R+   +  ++  LT PL+T + GTK GKT  G
Sbjct: 179 LNELYGCEMQIGGSDQWGNITSGTDLIRRMSVGEDRQVHGLTVPLVTKSDGTKFGKTEGG 238

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKI 301
           A+WL+++ TSPY F+Q+W N DD DVV +    T L + EI  +A+      E   A+++
Sbjct: 239 AVWLDQDKTSPYKFYQFWINTDDRDVVKYLNFFTFLSIEEIQGLAQEVESQPEKRNAQRM 298

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMG 351
           +A E+T +VHG E  E+A   +   F   I +            +P+  +   E    M 
Sbjct: 299 LAKEVTELVHGVEARERAEKISQALFTGGIANLTAKEVEEGFSDVPSADVEDQE----ML 354

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           L+  ++K G  +S  +AR  ++S A+ +N    ++  L +   D   +  I +  GKKN+
Sbjct: 355 LVDALIKVGAVSSRRQARESMESGAVYVNGIRQTDTTLTVAQLDKIESRFIVIRRGKKNY 414

Query: 412 IICHLC 417
            +  L 
Sbjct: 415 YLVKLV 420


>gi|301056168|ref|YP_003794379.1| tyrosyl-tRNA synthetase [Bacillus anthracis CI]
 gi|300378337|gb|ADK07241.1| tyrosyl-tRNA synthetase [Bacillus cereus biovar anthracis str. CI]
          Length = 418

 Score =  273 bits (699), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 150/385 (38%), Positives = 224/385 (58%), Gaps = 19/385 (4%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L  L  RG I+Q ++   L+ L  +  V  Y G+D TA SLH GH+  +++L   Q  GH
Sbjct: 4   LQDLEFRGLINQQTDAEGLEQLLEKESVKLYCGFDPTADSLHIGHMLPVLMLRRFQLAGH 63

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           +PI+L+GGGT +IGDPS +   R +     +    E IK   S+F+++   +  A M NN
Sbjct: 64  QPIALVGGGTGMIGDPSGKKAERTLNTKDTVAYYTESIKNQLSNFLEFENVENPATMANN 123

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL ++  I  LR+IG  FS+N ML+ ++V SRL  E  +SF EF+YMILQ+YDF+ L 
Sbjct: 124 YDWLGNLDVISFLRDIGKNFSLNYMLAKDTVASRL--ETGISFTEFSYMILQSYDFLNLY 181

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKT-PKLFALTSPLLTTASGTKMGKTLSGAIWL 247
           ++++CRLQ+GGSDQWGNI  G++L  + +   K F LT PL+T + GTK GKT  GAIWL
Sbjct: 182 QHHNCRLQIGGSDQWGNITAGLELIRKSEEDAKAFGLTIPLVTKSDGTKFGKTEGGAIWL 241

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATE 305
           + E T+PY F+Q+W N DD DVV + K  T L   EI  + K   +  E   A+K +  E
Sbjct: 242 DPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLSHEEILELEKQVAEAPEKRAAQKALGAE 301

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTL 355
           +T +VHG E  E+A   +   F  S+            + +P++  + ++      L+ L
Sbjct: 302 MTKLVHGEEALEQAIKISAALFSGSVAELTASEIEQGFKDVPSVERTAEDTV----LIDL 357

Query: 356 IVKAGFATSTNEARRHLKSNAIKIN 380
           +V++  + S  +AR  + + AI +N
Sbjct: 358 LVESKISPSKRQAREDVTNGAIYVN 382


>gi|251781560|ref|YP_002995861.1| tyrosyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
 gi|242390188|dbj|BAH80647.1| tyrosyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
          Length = 418

 Score =  273 bits (698), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 148/414 (35%), Positives = 229/414 (55%), Gaps = 15/414 (3%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG + Q ++ + L    ++G V+ Y GYD TA SLH GHL  ++    LQ  GHKP 
Sbjct: 7   LKARGLVFQTTDEQALVKALTEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAGHKPY 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+D  R +   + + E  +KIKG  S+F+ +  G   A ++NN  W
Sbjct: 67  ALVGGATGLIGDPSFKDAERSLQTKETVLEWSDKIKGQLSTFLDFENGDNKAELVNNYDW 126

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
              I +ID LR++G +F+VN M+S +SV+ R+  E  +S+ EF Y I+Q YDF EL   +
Sbjct: 127 FSQISFIDFLRDVGKYFTVNYMMSKDSVKKRI--ETGISYTEFAYQIMQGYDFYELNNKH 184

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
           +  LQ+GGSDQWGN+  G +L  R        +T PL+T ++G K GK+   A+WL+ + 
Sbjct: 185 NVTLQIGGSDQWGNMTAGTELLRRKADKAGHVMTVPLITDSTGKKFGKSEGNAVWLDADK 244

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATEITTM 309
           TSPY  +Q+W N+ D D V F K  T L + EI  +        +E  A+K +A E+ T+
Sbjct: 245 TSPYEMYQFWLNVMDDDAVRFLKIFTFLSLDEIADIESQFNAARHERLAQKTLAREVVTL 304

Query: 310 VHGREEAEKAATAAMECFDMSIHS-------QHMPTISISKDEVSRGMGLLTLIVKAGFA 362
           VHG E  ++A     + F  +I +       Q +  +     + +  + L+ ++V AG +
Sbjct: 305 VHGEEAYKQALNITEQLFAGNIKNLSANELKQGLSNVPNYHVQSADSLNLVDMLVTAGIS 364

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN--IKLSFGKKNHIIC 414
            S  +AR  +++ AI IN   +  ++L   L D D   N    +  GKK + + 
Sbjct: 365 PSKRQAREDVQNGAIYINGERV--QELDYTLSDTDKIDNQLTVVRRGKKKYAVL 416


>gi|329898102|ref|ZP_08272308.1| Tyrosyl-tRNA synthetase cluster 1 [gamma proteobacterium IMCC3088]
 gi|328920943|gb|EGG28371.1| Tyrosyl-tRNA synthetase cluster 1 [gamma proteobacterium IMCC3088]
          Length = 433

 Score =  273 bits (698), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 150/393 (38%), Positives = 221/393 (56%), Gaps = 20/393 (5%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L  RG + QI+         ++   T Y G+D TA SLH G L  L++L   Q+ G
Sbjct: 5   LLEDLKARGLVFQIAGEERFVDWLNEKPRTLYCGFDPTADSLHIGSLVPLLMLRRFQEAG 64

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+PI+L+GG T +IGDPSF+   R++     +   ++K+K   S FI +    + A++ N
Sbjct: 65  HRPIALVGGATGLIGDPSFKATERQLNTPDVVAGWVDKLKAQVSRFIAFDDTASSAMVAN 124

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQS-LSFLEFNYMILQAYDFVE 186
           N  W   +  +  LR+IG  FSVN M+  ESV+ R++RE S +SF EF+Y ILQ+ DF E
Sbjct: 125 NLDWTQGLDVLTFLRDIGKHFSVNSMIQKESVKQRIEREGSGISFTEFSYSILQSLDFAE 184

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + Y+C LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT SG IW
Sbjct: 185 LYQRYECGLQIGGSDQWGNITGGIDLARRLHGAQVFGLTMPLITKADGTKFGKTESGTIW 244

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK----LQGKEINEAKKII 302
           L+   TSPY F+Q+W    DADV  F +  T LP+ +I R+ +     QG+   +A+ ++
Sbjct: 245 LDASKTSPYAFYQFWLGTADADVYKFLRYFTFLPVEQIARIEEEDKTAQGRP--QAQAVL 302

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHS-----------QHMPTISISKDEVSRGMG 351
           A E+T +VHG++    A       F  S+               +PT +I++ E+   + 
Sbjct: 303 AEEVTRLVHGQDGLGAALRITEALFSGSLSDLNADDLAQLAQDGLPTTNITRGELPATLT 362

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSII 384
            L   V+A    S  +A+  L  +A+ +N + +
Sbjct: 363 QLLSDVEA--VASGKQAKDALSRSAVTVNGAAL 393


>gi|325962889|ref|YP_004240795.1| tyrosyl-tRNA synthetase [Arthrobacter phenanthrenivorans Sphe3]
 gi|323468976|gb|ADX72661.1| tyrosyl-tRNA synthetase [Arthrobacter phenanthrenivorans Sphe3]
          Length = 438

 Score =  273 bits (698), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 152/423 (35%), Positives = 236/423 (55%), Gaps = 22/423 (5%)

Query: 2   PAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
           P F ++    L  RG +H  ++  EL+ L + G VT Y G+D TA SLH G+L QL+++ 
Sbjct: 15  PTF-ANIWQELKWRGLVHVSTDEAELEKLLAGGPVTYYCGFDPTAPSLHLGNLVQLLVMR 73

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQE-IQENIEKIKGIFSSFIKYGTGK 120
            LQ  GHKP+ L+GG T +IGDP  R  + R + +++ + E +  ++     F+ +  G 
Sbjct: 74  RLQLAGHKPLGLVGGSTGMIGDP--RPTAERTLNTKDTVAEWVGYLQAQVRRFLSF-EGD 130

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
             A M+NN  W   +  ID LR++G  F V  ML  ++V SRL  ++ +S+ EF+Y ILQ
Sbjct: 131 NAARMVNNLDWTAPLSAIDFLRDVGKHFRVGTMLRKDAVASRLNSDEGISYTEFSYQILQ 190

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
             D+++L ++Y C LQ GGSDQWGN+  G +L  +++   + AL +PL+T A GTK GK+
Sbjct: 191 GMDYLQLYRDYGCMLQTGGSDQWGNLTSGTELIRKVEGKSVHALGTPLITNADGTKFGKS 250

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE--INEA 298
              AIWL+  M SPY F+Q+W N  DADVV+  K  T L  +EID +A    +     E 
Sbjct: 251 EGNAIWLDAGMCSPYAFYQFWLNTADADVVNRLKVFTFLTRAEIDELAAAVAERPFAREG 310

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFD-----------MSIHSQHMPTISISKDEVS 347
           ++ +A E+T++VHG E  EK   A+   F            +   +  +P+ ++  DE  
Sbjct: 311 QRKLAYEVTSLVHGVEATEKVIAASAALFGNGDLTALDKTTLQAATSELPSATVQVDE-- 368

Query: 348 RGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFG 407
             MG++ L+V +G + S + ARR +      +NN  +S+ +  I   +      + L  G
Sbjct: 369 --MGIVDLLVASGLSESKSAARRTVGEGGAYVNNEKVSDPEAVISESELLHGQYLLLRRG 426

Query: 408 KKN 410
           KKN
Sbjct: 427 KKN 429


>gi|261418185|ref|YP_003251867.1| tyrosyl-tRNA synthetase [Geobacillus sp. Y412MC61]
 gi|319767855|ref|YP_004133356.1| tyrosyl-tRNA synthetase [Geobacillus sp. Y412MC52]
 gi|261374642|gb|ACX77385.1| tyrosyl-tRNA synthetase [Geobacillus sp. Y412MC61]
 gi|317112721|gb|ADU95213.1| tyrosyl-tRNA synthetase [Geobacillus sp. Y412MC52]
          Length = 419

 Score =  273 bits (698), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 150/389 (38%), Positives = 222/389 (57%), Gaps = 11/389 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D L+ L  RG ++Q ++   L  L  +  VT Y G+D TA SLH G+L  ++ L   Q+ 
Sbjct: 2   DLLAELQWRGLVNQTTDEDGLRELLKEERVTLYCGFDPTADSLHIGNLAAILTLRRFQQA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI+L+GG T +IGDPS +   R +   + ++    +I+   S F+ +      A + 
Sbjct: 62  GHQPIALVGGATGLIGDPSGKKSERTLNAKETVEAWSARIQEQLSRFLDFEADGNPAKIK 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W+  +  I  LR++G  FSVN M++ ESV+SR+  E  +SF EF+YM+LQAYDF+ 
Sbjct: 122 NNYDWIGPLDVITFLRDVGKHFSVNYMMAKESVQSRI--ETGISFTEFSYMMLQAYDFLR 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASGTKMGKTLSGAI 245
           L +   CRLQ+GGSDQWGNI  G++L  + K   + F LT PL+T A GTK GKT SG I
Sbjct: 180 LYETEGCRLQIGGSDQWGNITAGLELIRKTKGEARAFGLTIPLVTKADGTKFGKTESGTI 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIA 303
           WL+KE TSPY F+Q+W N DD DV+ + K  T L   EI+ + +   +  E   A+K +A
Sbjct: 240 WLDKEKTSPYEFYQFWINTDDRDVIRYLKYFTFLSKEEIEALEQELREAPEKRAAQKALA 299

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSR------GMGLLTLIV 357
            E+T +VHG E   +A   +   F   I +     I     +V         + L+ L+V
Sbjct: 300 EEVTKLVHGEEALRQAVRISEALFSGDIGNLTAAEIEQGFKDVPSFVHEGGDVPLVELLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISN 386
            AG + S  +AR  +++ AI +N   + +
Sbjct: 360 SAGISPSKRQAREDIQNGAIYVNGERLQD 388


>gi|332522596|ref|ZP_08398848.1| tyrosine--tRNA ligase [Streptococcus porcinus str. Jelinkova 176]
 gi|332313860|gb|EGJ26845.1| tyrosine--tRNA ligase [Streptococcus porcinus str. Jelinkova 176]
          Length = 420

 Score =  273 bits (698), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 146/398 (36%), Positives = 222/398 (55%), Gaps = 19/398 (4%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG + Q ++   L    ++G V+ Y GYD TA SLH GHL  ++    LQ  GHKP 
Sbjct: 7   LKARGLVFQTTDEEALVKALTEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAGHKPY 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+D  R +   + + E   KIKG  S F+ +  G+  A ++NN  W
Sbjct: 67  ALVGGATGLIGDPSFKDSERSLQTKETVLEWSAKIKGQLSQFLDFENGENKAELVNNYDW 126

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
              I +ID LR++G +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF EL   +
Sbjct: 127 FSQISFIDFLRDVGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFYELNDKH 184

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
           +  LQ+GGSDQWGN+  G +L  R        +T PL+T ASG K GK+   A+WL+ + 
Sbjct: 185 NVTLQIGGSDQWGNMTAGTELLRRKSDKIGHVMTVPLITDASGKKFGKSEGNAVWLDADK 244

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATEITTM 309
           TSPY  +Q+W N+ D D V F K  T L + EI  + +      +E  A+K +A E+ T+
Sbjct: 245 TSPYEMYQFWLNVMDDDAVRFLKIFTFLSLQEIAEIEEAFNAARHERLAQKTLAREVVTL 304

Query: 310 VHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIVKA 359
           VHG E  ++A     + F  +I             ++P  ++  D+    + ++ ++V +
Sbjct: 305 VHGEEAYKQAVNITEQLFAGNIKQLSAKELRQGLSNVPNYAVQTDD---NLNIVDILVSS 361

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
             ++S  +AR  +++ AI IN   +S+  L   L D D
Sbjct: 362 KISSSKRQAREDVQNGAIYINGERVSD--LNYVLSDTD 397


>gi|323699292|ref|ZP_08111204.1| tyrosyl-tRNA synthetase [Desulfovibrio sp. ND132]
 gi|323459224|gb|EGB15089.1| tyrosyl-tRNA synthetase [Desulfovibrio desulfuricans ND132]
          Length = 426

 Score =  273 bits (698), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 150/394 (38%), Positives = 229/394 (58%), Gaps = 23/394 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I+Q+S+  ++    S+   T Y G+D TA SLH G+L  L+ L  +++ GH P+
Sbjct: 7   LKWRGLINQVSDEDKVRAYLSEPGATMYCGFDPTAESLHVGNLVPLLCLVRMKRAGHHPL 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            LMGG T  IGDPS +D+ R +  + ++ E +E IK     F++  TG+   + +NN  W
Sbjct: 67  YLMGGATGRIGDPSGKDKERELSDADKLDERLEMIKHQVRRFVERNTGERPNI-VNNYDW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQS-LSFLEFNYMILQAYDFVELAKN 190
              +  I+LLR++G  F++N ML  ESV+ R+ RE++ +S+ EF+YMILQAYDF  L KN
Sbjct: 126 TKDMSCIELLRDVGKHFTINWMLQKESVKGRIGREETGISYTEFSYMILQAYDFYHLYKN 185

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERL-----KTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           YDCRLQ+GG DQWGNI  G +   R      ++ + FALT PL+TTASG K GK+   A+
Sbjct: 186 YDCRLQIGGGDQWGNITAGCEFIRRRYAVDGESAEAFALTFPLITTASGKKFGKSEGNAV 245

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIA 303
           +LN ++T+PY F+Q++ N DDADV+ F K  T L   +I  + K   +   +  A+K +A
Sbjct: 246 YLNADLTTPYAFYQFFINTDDADVIKFLKLFTFLTPEQIAELEKQTEEAPHLRAAQKRLA 305

Query: 304 TEITTMVHGREEAEK--AATAAM------ECFD---MSIHSQHMPTISISKDEVSRGMGL 352
            E+TTM+HG+ E E+  AAT A+      +  D   +    +  P +  +  +V     L
Sbjct: 306 EEVTTMIHGKHELERVLAATEALFGKGDIKAIDPGTLRAAFESAPAVRYAPGDVPD---L 362

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISN 386
             ++V  G   S  + R+ +    + IN   + +
Sbjct: 363 PQMLVDLGLVKSKGQGRKDILGGGVYINGERVED 396


>gi|60593716|pdb|1VBN|A Chain A, Escherichia Coli Tyrosyl-Trna Synthetase Mutant Complexed
           With Tyr-Ams
 gi|60593717|pdb|1VBN|B Chain B, Escherichia Coli Tyrosyl-Trna Synthetase Mutant Complexed
           With Tyr-Ams
          Length = 318

 Score =  273 bits (698), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 136/312 (43%), Positives = 194/312 (62%), Gaps = 5/312 (1%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L ERG + Q+++   L    +QG +    G+D TA SLH GHL  L+ L   Q+ GHKP+
Sbjct: 6   LQERGLVAQVTDEEALAERLAQGPIALVCGFDPTADSLHLGHLVPLLCLKRFQQAGHKPV 65

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+   R++   + +QE ++KI+   + F+ +  G+  A+  NN  W
Sbjct: 66  ALVGGATGLIGDPSFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDCGENSAIAANNYDW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDFVELAKN 190
             ++  +  LR+IG  FSVN+M++ E+V+ RL RE Q +SF EF+Y +LQ YDF  L K 
Sbjct: 126 FGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNREDQGISFTEFSYNLLQGYDFACLNKQ 185

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKE 250
           Y   L +GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA+WL+ +
Sbjct: 186 YGVVLCIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGAVWLDPK 245

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKIIATEIT 307
            TSPY F+Q+W N  DADV  F K  T + + EI+ +    K  GK    A+ ++A ++T
Sbjct: 246 KTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINALEEEDKNSGK-APRAQYVLAEQVT 304

Query: 308 TMVHGREEAEKA 319
            +VHG E  + A
Sbjct: 305 RLVHGEEGLQAA 316


>gi|139472959|ref|YP_001127674.1| tyrosyl-tRNA synthetase [Streptococcus pyogenes str. Manfredo]
 gi|189029778|sp|A2RC49|SYY_STRPG RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|134271205|emb|CAM29421.1| putative tyrosyl-tRNA synthetase [Streptococcus pyogenes str.
           Manfredo]
          Length = 418

 Score =  273 bits (698), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 145/415 (34%), Positives = 228/415 (54%), Gaps = 17/415 (4%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG + Q ++ + L    ++G V+ Y GYD TA SLH GHL  ++    LQ  GHKP 
Sbjct: 7   LKARGLVFQTTDEQALVKALTEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAGHKPY 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+D  R +   + + E  +KIKG  S+F+ +  G   A ++NN  W
Sbjct: 67  ALVGGATGLIGDPSFKDAERSLQTKETVLEWSDKIKGQLSTFLDFENGDNKAELVNNYDW 126

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
              I +ID LR++G +F+VN M+S +SV+ R+  E  +S+ EF Y I+Q YDF EL   +
Sbjct: 127 FSQISFIDFLRDVGKYFTVNYMMSKDSVKKRI--ETGISYTEFAYQIMQGYDFYELNDKH 184

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
           +  LQ+GGSDQWGN+  G +L  +        +T PL+T ++G K GK+   A+WL+ + 
Sbjct: 185 NVTLQIGGSDQWGNMTAGTELLRKKADKTGHVMTVPLITDSTGKKFGKSEGNAVWLDADK 244

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATEITTM 309
           TSPY  +Q+W N+ D D V F K  T L + EI  +        +E  A+KI+A E+ T+
Sbjct: 245 TSPYEMYQFWLNVMDDDAVRFLKIFTFLSLDEIAEIETQFNAARHERLAQKILAREVVTL 304

Query: 310 VHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIVKA 359
           VHG E  ++A     + F  +I +           ++P   +  ++    + L+ ++V A
Sbjct: 305 VHGEEAYKQALNITEQLFAGNIKNLSANELKQGLSNVPNYHVQSED---SLNLVDMLVTA 361

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           G + S  +AR  +++ AI IN   + +   Q+   D        +  GKK + + 
Sbjct: 362 GISPSKRQAREDVQNGAIYINGDRVQDLDYQLSNDDKTDDQLTVIRRGKKKYAVL 416


>gi|332826992|gb|EGJ99786.1| tyrosyl-tRNA synthetase [Dysgonomonas gadei ATCC BAA-286]
          Length = 430

 Score =  273 bits (698), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 155/438 (35%), Positives = 242/438 (55%), Gaps = 44/438 (10%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG I +I    E  +   + + + Y+G D TA SLH GHL  +M+L   Q+ 
Sbjct: 2   NFVEELRWRGMIQEIMPGTEEQL--QKELTSGYVGIDPTADSLHIGHLVSVMILKHFQRA 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA-LM 125
           GH+PI+L+GG T +IGDPS +   R ++    ++ N E IK   + F+ + + K +A L+
Sbjct: 60  GHRPIALVGGATGMIGDPSMKSAERNLLDEATLRHNQESIKKQLAKFLDFESDKPNAALL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQS--LSFLEFNYMILQAYD 183
           +NN  W+    +++ +R+IG   +VN M++ +SV+ RL  E S  +SF EF+Y ++QAYD
Sbjct: 120 VNNYDWMKDFSFLNFIRDIGKHITVNYMMAKDSVKKRLSGEASEGMSFTEFSYQLMQAYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           ++ L +   CR+QMGGSDQWGNI  G +L  R  + + FAL  PL+T A GTK GKT SG
Sbjct: 180 YLHLYETLGCRIQMGGSDQWGNITTGTELIRRKASGEAFALVCPLITKADGTKFGKTESG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKI 301
            +WL +  TSPY F+Q+W N+ D D   + K  T L   EI+   M +     +   +K 
Sbjct: 240 NVWLERRYTSPYKFYQFWLNVSDDDAEKYIKIFTALSKEEIEALVMEQKSAPHLRPLQKR 299

Query: 302 IATEITTMVHGREEAEKAATA-----------AMECFDMSIHSQ---HMPTISISKDEVS 347
           +A E+T MVH  E+ ++A  A           A++  D     Q    +PT  ISKDE+S
Sbjct: 300 LAKEVTVMVHSEEDYDQAVEASNILFGNATADALKKLDEETFLQVFEGVPTFDISKDELS 359

Query: 348 RGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+ ++ L+ + A    S  E R+ +++  + +N         ++K+++FD    I  SF
Sbjct: 360 AGIKVVDLLTENASMFPSKGEMRKTVQAGGVMVN---------KVKVENFDDM--IDSSF 408

Query: 407 -----------GKKNHII 413
                      GKKN+ +
Sbjct: 409 LIAGKYIIAQKGKKNYFL 426


>gi|297181128|gb|ADI17326.1| tyrosyl-tRNA synthetase [uncultured actinobacterium HF0070_17F14]
 gi|297181219|gb|ADI17414.1| tyrosyl-tRNA synthetase [uncultured Verrucomicrobiales bacterium
           HF0070_30L02]
          Length = 424

 Score =  273 bits (697), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 148/398 (37%), Positives = 218/398 (54%), Gaps = 13/398 (3%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  LS RG I   ++   L      G +T Y G+D TA SLH G+L  L+LL   Q  G
Sbjct: 10  ILDDLSARGLIQDTTDDAALRARLEAGPITLYCGFDPTADSLHVGNLVPLLLLRRFQDFG 69

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+PI+L GG T ++GDPS R + R ++  + +  N+  IK      +  G     A +++
Sbjct: 70  HRPIALAGGATGMVGDPSGRSDERNLLGGETLDHNLAAIKEQLCLLLDIGG---QAQLVD 126

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W+ ++  ++ LR+IG   +VN ML+ ES++SRL  EQ +S+ EF+YM+LQA DFV L
Sbjct: 127 NREWIENVTALEFLRDIGKLVTVNTMLAKESIKSRLDGEQGISYTEFSYMLLQANDFVSL 186

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
                C LQ+GGSDQWGNI  GID+  R        LT PL+T + G K GKT  GA+WL
Sbjct: 187 HDRNGCELQVGGSDQWGNITAGIDMIRRKTGAHAHGLTVPLVTRSDGAKFGKTADGAVWL 246

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI-DRMAK-LQGKEINEAKKIIATE 305
           + E T PY F QYW   DD DV  F  ++T LP   + D MA+ L+  E   A++++A E
Sbjct: 247 SAERTLPYEFHQYWMRTDDRDVERFLMQMTLLPTEGVRDVMAEHLRAPEQRSAQRVLADE 306

Query: 306 ITTMVHGREEAEKAATAAMECF------DMSIHSQH--MPTISISKDEVSRGMGLLTLIV 357
           +T ++HG  E  +A  AA   F        +I +    +P   ++ D +     ++ L+V
Sbjct: 307 VTALIHGPGEVRRANLAAGALFGGDELDGEAIEALRGIVPETELAADTLIGEEPVVDLLV 366

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
             G  +S  +ARR +    I++N   I++    + L D
Sbjct: 367 ATGVCSSKGDARRTVDQGGIRLNGEKIADGTTAVTLVD 404


>gi|297529039|ref|YP_003670314.1| tyrosyl-tRNA synthetase [Geobacillus sp. C56-T3]
 gi|297252291|gb|ADI25737.1| tyrosyl-tRNA synthetase [Geobacillus sp. C56-T3]
          Length = 419

 Score =  273 bits (697), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 153/393 (38%), Positives = 225/393 (57%), Gaps = 16/393 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D L+ L  RG ++Q ++   L  L ++  VT Y G+D TA SLH G+L  ++ L   Q+ 
Sbjct: 2   DLLAELQWRGLVNQTTDEDGLRKLLNEERVTLYCGFDPTADSLHIGNLAAILTLRRFQQA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI+L+GG T +IGDPS +   R +   + ++    +I+   S F+ +      A + 
Sbjct: 62  GHQPIALVGGATGLIGDPSGKKSERTLNAKETVEAWSARIQEQLSRFLDFEAHGNPAKIK 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W+  +  I  LR++G  FSVN M++ ESV+SR+  E  +SF EF+YM+LQAYDF+ 
Sbjct: 122 NNYDWIGPLDVITFLRDVGKHFSVNYMMAKESVQSRI--ETGISFTEFSYMMLQAYDFLR 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASGTKMGKTLSGAI 245
           L +   CRLQ+GGSDQWGNI  G++L  + K   + F LT PL+T A GTK GKT SG I
Sbjct: 180 LYETEGCRLQIGGSDQWGNITAGLELIRKTKGEARAFGLTIPLVTKADGTKFGKTESGTI 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIA 303
           WL+KE TSPY F+Q+W N DD DV+ + K  T L   EI+ + +   +  E   A+K +A
Sbjct: 240 WLDKEKTSPYEFYQFWINTDDRDVIRYLKYFTFLSKEEIEALEQELREAPEKRAAQKALA 299

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSR------GMGLLTLIV 357
            E+T +VHG E   +A   +   F   I +     I     +V         + L+ L+V
Sbjct: 300 EEVTKLVHGEEALRQAIRISEALFSGDIANLTAAEIEQGFKDVPSFVHEGGDVPLVELLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQ 390
            AG + S  +AR  +++ AI +N      E+LQ
Sbjct: 360 SAGISPSKRQAREDIQNGAIYVN-----GERLQ 387


>gi|257056540|ref|YP_003134372.1| tyrosyl-tRNA synthetase [Saccharomonospora viridis DSM 43017]
 gi|256586412|gb|ACU97545.1| tyrosyl-tRNA synthetase [Saccharomonospora viridis DSM 43017]
          Length = 424

 Score =  273 bits (697), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 148/400 (37%), Positives = 230/400 (57%), Gaps = 15/400 (3%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  LS RG I Q ++   L      G +  Y G+D TA SLHAGHL Q+++L   Q  G
Sbjct: 5   ILDELSWRGLIAQSTDLDALRRDLDSGPLAVYAGFDPTAPSLHAGHLVQMLMLRRFQDAG 64

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQE-IQENIEKIKGIFSSFIKYGTGKTDALML 126
           H+P+ L GGGT +IGDP  RD   R++ S+E ++E  ++++G  + F+ +       + +
Sbjct: 65  HRPVLLAGGGTGLIGDP--RDVGERVLHSEEQVREWADRLRGQLARFVDFDHPDVPPIEV 122

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL S+     LR++G  FS+N ML+ E+V+ RL+ +  +S+ EF+YM+LQA D+ E
Sbjct: 123 NNLDWLGSMTVPTFLRDVGKHFSINTMLARETVKRRLEGD-GISYTEFSYMLLQAADYRE 181

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA-I 245
           L + Y+ RLQ+GGSDQWGNII G+DL  R+   ++ ALT+PL+T + G K+GK+  G  +
Sbjct: 182 LFERYNVRLQVGGSDQWGNIIAGVDLIRRVHGAQVHALTTPLITDSEGRKLGKSTGGGNV 241

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKKIIA 303
           W++ EMTSPY ++QY+ N+ DADVV   K LT L   EI  +  A  +     +A++ +A
Sbjct: 242 WVDPEMTSPYAWYQYFLNVPDADVVRCLKLLTFLDADEIGELETATNERPAARQAQRRLA 301

Query: 304 TEITTMVHGREEAEKAATAAMECF--------DMSIHSQHMPTISISKDEVSRGMGLLTL 355
            E+T +VHG E+  +   A+   F        D +     M  +   +  ++    ++ L
Sbjct: 302 QELTDLVHGPEQTRQVVAASQALFGRGDLRELDAATLDAAMAEVPTGEVRLADEPTIVEL 361

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           +V  G   S   ARR +K     +NN+ I+ E  + +  D
Sbjct: 362 LVAGGLVESKGAARRTVKEGGAYVNNTKITEEDWKPEPSD 401


>gi|97202276|sp|Q47N93|SYY_THEFY RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
          Length = 432

 Score =  273 bits (697), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 156/428 (36%), Positives = 247/428 (57%), Gaps = 27/428 (6%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +D +  L  RG I Q ++  +L    + G VT Y G+D TA SLH GHLTQ + L   Q+
Sbjct: 2   TDIIDDLQWRGLIAQTTDLDDLRKALADGPVTLYCGFDPTAGSLHVGHLTQALTLARFQR 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQE-IQENIEKIKGIFSSFIKYG-----TG 119
            GH+PI+L+GG T +IGDP  +  + R + S E I++ +  +K   SSF+++        
Sbjct: 62  AGHRPIALVGGATGMIGDP--KPNAERTLNSPETIRQWVGNLKRQLSSFLEFTPEGAEPK 119

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
            TDAL+L+N  WL  +  I LLR+IG  FS+N+ML+ E+V++RL+    +S+ EF+Y++L
Sbjct: 120 PTDALLLDNAEWLGKLTAIGLLRDIGKHFSINQMLARETVKTRLE-GAGMSYTEFSYVLL 178

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK----LFALTSPLLTTASGT 235
           Q+YD+VEL + + C LQ+GGSDQWGNI  G+DL  R++  +      ALT+ LLT A GT
Sbjct: 179 QSYDYVELYRRHGCTLQIGGSDQWGNITAGLDLIRRMEGNEPHGPAHALTTTLLTKADGT 238

Query: 236 KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGK 293
           K GKT SGA+WL+ E+TSPY F+Q+W N DD D+  + +  +     EI+ + +  ++  
Sbjct: 239 KFGKTESGAVWLDPELTSPYAFYQFWFNSDDRDIPRYLRIFSFRSREEIEELEQKTIERP 298

Query: 294 EINEAKKIIATEITTMVHGREEAEKAATAAMECF------DMSIHS-----QHMPTISIS 342
               A++ +A E+TT+VHG +E      A+   F      D++  +     + +P + +S
Sbjct: 299 AERAAQRALAEELTTLVHGEQECRNVIEASKALFGHGTLADLNPDTLGAALKEVPHVELS 358

Query: 343 KDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNI 402
              V     L+ L    G   S + ARR ++     +NN+ +++ + ++   D      +
Sbjct: 359 G-TVRELPPLVDLFASTGLVPSKSAARRTIQEGGAYLNNAKVTDIEARVSEADLLHGRYL 417

Query: 403 KLSFGKKN 410
            L  GK+N
Sbjct: 418 VLRRGKRN 425


>gi|323126353|gb|ADX23650.1| tyrosyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           equisimilis ATCC 12394]
          Length = 418

 Score =  273 bits (697), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 148/414 (35%), Positives = 228/414 (55%), Gaps = 15/414 (3%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG + Q ++   L    ++G V+ Y GYD TA SLH GHL  ++    LQ  GHKP 
Sbjct: 7   LKARGLVFQTTDEEALVKALTEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAGHKPY 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+D  R +   + + E  +KIKG  S+F+ +  G   A ++NN  W
Sbjct: 67  ALVGGATGLIGDPSFKDAERSLQTKETVLEWSDKIKGQLSTFLDFENGDNKAELVNNYDW 126

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
              I +ID LR++G +F+VN M+S +SV+ R+  E  +S+ EF Y I+Q YDF EL   +
Sbjct: 127 FSQISFIDFLRDVGKYFTVNYMMSKDSVKKRI--ETGISYTEFAYQIMQGYDFYELNNKH 184

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
           +  LQ+GGSDQWGN+  G +L  R        +T PL+T ++G K GK+   A+WL+ + 
Sbjct: 185 NVTLQIGGSDQWGNMTAGTELLRRKADQTGHVMTVPLITDSTGKKFGKSEGNAVWLDADK 244

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATEITTM 309
           TSPY  +Q+W N+ D D V F K  T L + EI  +        +E  A+K +A E+ T+
Sbjct: 245 TSPYEMYQFWLNVMDDDAVRFLKIFTFLSLDEIADIESQFNAARHERLAQKTLAREVVTL 304

Query: 310 VHGREEAEKAATAAMECFDMSIHS-------QHMPTISISKDEVSRGMGLLTLIVKAGFA 362
           VHG E  ++A     + F  +I +       Q +  +     + +  + L+ ++V AG +
Sbjct: 305 VHGEEAYKQALNITEQLFAGNIKNLSANELKQGLSNVPNYHVQSADSLNLVDMLVTAGIS 364

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN--IKLSFGKKNHIIC 414
            S  +AR  +++ AI IN   +  ++L   L D D   N    +  GKK + + 
Sbjct: 365 PSKRQAREDVQNGAIYINGERV--QELDYTLSDTDKIDNQLTVVRRGKKKYAVL 416


>gi|219666306|ref|YP_002456741.1| tyrosyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2]
 gi|259516975|sp|B8G0N6|SYY_DESHD RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|219536566|gb|ACL18305.1| tyrosyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2]
          Length = 420

 Score =  273 bits (697), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 157/426 (36%), Positives = 237/426 (55%), Gaps = 22/426 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + L  L  RG ++Q ++   L     +  +T Y G+D TA SLH GHL  +++L   Q  
Sbjct: 2   NILDDLKARGLVYQTTDEEALYKRL-ESPMTLYCGFDPTADSLHIGHLLPVLMLRRFQLA 60

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH PI+L+GGGT +IGDPS +   R +  ++ +QE   +IK   S F+ +      A+M 
Sbjct: 61  GHCPIALVGGGTGLIGDPSGKTSERTLNPTEVVQEWANRIKEQLSCFLDFEGVGNPAIMA 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL +I  I+ LR+IG  FS+  ML+ ESV SR+ R   +SF EF+Y ILQ+YDF++
Sbjct: 121 NNYEWLGTINVIEFLRDIGKNFSLGSMLAKESVESRMSR--GISFTEFSYQILQSYDFLK 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERL---KTPKLFALTSPLLTTASGTKMGKTLSG 243
           L + Y C +Q+GGSDQWGNI  G DL  R+   +  ++  LT PL+T + GTK GKT  G
Sbjct: 179 LNELYGCEMQIGGSDQWGNITSGTDLIRRMSVGEDRQVHGLTVPLVTKSDGTKFGKTEGG 238

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKI 301
           A+WL+ + TSPY F+Q+W N DD DVV +    T L + EI  +A+      E   A+++
Sbjct: 239 AVWLDPDKTSPYKFYQFWINTDDRDVVKYLNFFTFLSIEEIQGLAQEVESQPEKRNAQRM 298

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMG 351
           +A E+T +VHG E  E+A   +   F   I +            +P+  +   E    M 
Sbjct: 299 LAKEVTELVHGVEARERAEKISQALFTGGIANLTAKEVEEGFSDVPSADVEDQE----ML 354

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           L+  ++K G  +S  +AR  ++S A+ +N    ++  L +   D   +  I +  GKKN+
Sbjct: 355 LVDALIKVGAVSSRRQARESMESGAVYVNGIRQTDTTLTVAQLDKIESRFIVIRRGKKNY 414

Query: 412 IICHLC 417
            +  L 
Sbjct: 415 YLVKLV 420


>gi|332667701|ref|YP_004450489.1| Tyrosyl-tRNA synthetase [Haliscomenobacter hydrossis DSM 1100]
 gi|332336515|gb|AEE53616.1| Tyrosyl-tRNA synthetase [Haliscomenobacter hydrossis DSM 1100]
          Length = 426

 Score =  273 bits (697), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 152/423 (35%), Positives = 229/423 (54%), Gaps = 20/423 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           DFL  L  RG +H  S    ++   S G + AYIG+D TA SL  G+  Q+MLL   Q +
Sbjct: 3   DFLEELEWRGMLH--SKIEGIEEKLSAGKIAAYIGFDPTAPSLTIGNYVQIMLLKLFQLS 60

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI LMGG T  IGDPS +D+ R +  + E+ +N+      F   + +  G   A+M+
Sbjct: 61  GHQPIVLMGGATGRIGDPSGKDKERELKTTDELDDNLAHQTAQFKRLLDFEGGDNPAIMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  +  ++  +D LR++G   +VN ML  +SV++RL  E  +SF EF+Y +LQ YDF  
Sbjct: 121 NNLDFYRNMNVLDFLRDVGKTLTVNYMLQKDSVQNRL--ESGISFTEFSYQLLQGYDFQC 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L K Y C LQMGGSDQWGNI  G +   R  + K +A+T+PLLT A GTK GK+ +G IW
Sbjct: 179 LYKQYGCILQMGGSDQWGNITAGTEFIRRNLSEKAYAITTPLLTKADGTKFGKSTAGNIW 238

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           ++ +MTSPY F+Q+W N DDAD+  F +  T     EI+   +    +  E K+++A E+
Sbjct: 239 IDPKMTSPYKFYQFWINADDADIPKFTRYFTLHAKEEIEAREREFASDPRELKRLLAEEL 298

Query: 307 TTMVHGRE---------------EAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMG 351
           T  +HG E                A++    ++   ++   S  +P+  ++K   + G  
Sbjct: 299 TKRIHGEEAYQSVLKVSELLFGRNADRDMLLSLSAEELETVSSEIPSFQVTKALFAAGAN 358

Query: 352 LLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
           +  L+        S  E RR ++ NAI +N   I++ +  I  +       + +  GKKN
Sbjct: 359 ISDLLADHTQILASKGEVRRAIQGNAISVNKDKINSHEALIPSESLLHGKYLMVENGKKN 418

Query: 411 HII 413
             I
Sbjct: 419 KYI 421


>gi|229112124|ref|ZP_04241667.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus Rock1-15]
 gi|228671447|gb|EEL26748.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus Rock1-15]
          Length = 418

 Score =  273 bits (697), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 150/385 (38%), Positives = 222/385 (57%), Gaps = 19/385 (4%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L  L  RG I+Q ++   L+ L  +  V  Y G+D TA SLH GH+  +++L   Q  GH
Sbjct: 4   LQDLEFRGLINQQTDAEGLEQLLEKESVKLYCGFDPTADSLHIGHMLPVLMLRRFQLAGH 63

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           +PI+L+GGGT +IGDPS +   R +     +    E IK   S+F+++      A M NN
Sbjct: 64  QPIALVGGGTGMIGDPSGKKAERTLNTKDTVAYYTESIKNQLSNFLEFENVDNPATMANN 123

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL S+  I  LR+IG  F +N ML+ ++V SRL  E  +SF EF+YMILQ+YDF+ L 
Sbjct: 124 YDWLGSLDVISFLRDIGKNFGLNYMLAKDTVASRL--ETGISFTEFSYMILQSYDFLNLY 181

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKT-PKLFALTSPLLTTASGTKMGKTLSGAIWL 247
           + ++CRLQ+GGSDQWGNI  G++L  + +   K F LT PL+T + GTK GKT  GAIWL
Sbjct: 182 QQHNCRLQIGGSDQWGNITAGLELIRKSEEDAKAFGLTIPLVTKSDGTKFGKTEGGAIWL 241

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATE 305
           + E T+PY F+Q+W N DD DVV + K  T L   EI  + K   +  E   A+K + +E
Sbjct: 242 DPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLSHEEILELEKQVAEAPEKRAAQKALGSE 301

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTL 355
           +T +VHG E  E+A   +   F  S+            + +P++  + ++      L+ L
Sbjct: 302 MTKLVHGEEALEQAIKISAALFSGSVAELTASEIEQGFKDVPSVERTAEDTV----LIDL 357

Query: 356 IVKAGFATSTNEARRHLKSNAIKIN 380
           +V++  + S  +AR  + + AI +N
Sbjct: 358 LVESKISPSKRQAREDVTNGAIYVN 382


>gi|72162442|ref|YP_290099.1| tyrosyl-tRNA synthetase [Thermobifida fusca YX]
 gi|71916174|gb|AAZ56076.1| tyrosyl-tRNA synthetase [Thermobifida fusca YX]
          Length = 447

 Score =  273 bits (697), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 156/428 (36%), Positives = 247/428 (57%), Gaps = 27/428 (6%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +D +  L  RG I Q ++  +L    + G VT Y G+D TA SLH GHLTQ + L   Q+
Sbjct: 17  TDIIDDLQWRGLIAQTTDLDDLRKALADGPVTLYCGFDPTAGSLHVGHLTQALTLARFQR 76

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQE-IQENIEKIKGIFSSFIKYG-----TG 119
            GH+PI+L+GG T +IGDP  +  + R + S E I++ +  +K   SSF+++        
Sbjct: 77  AGHRPIALVGGATGMIGDP--KPNAERTLNSPETIRQWVGNLKRQLSSFLEFTPEGAEPK 134

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
            TDAL+L+N  WL  +  I LLR+IG  FS+N+ML+ E+V++RL+    +S+ EF+Y++L
Sbjct: 135 PTDALLLDNAEWLGKLTAIGLLRDIGKHFSINQMLARETVKTRLE-GAGMSYTEFSYVLL 193

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK----LFALTSPLLTTASGT 235
           Q+YD+VEL + + C LQ+GGSDQWGNI  G+DL  R++  +      ALT+ LLT A GT
Sbjct: 194 QSYDYVELYRRHGCTLQIGGSDQWGNITAGLDLIRRMEGNEPHGPAHALTTTLLTKADGT 253

Query: 236 KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGK 293
           K GKT SGA+WL+ E+TSPY F+Q+W N DD D+  + +  +     EI+ + +  ++  
Sbjct: 254 KFGKTESGAVWLDPELTSPYAFYQFWFNSDDRDIPRYLRIFSFRSREEIEELEQKTIERP 313

Query: 294 EINEAKKIIATEITTMVHGREEAEKAATAAMECF------DMSIHS-----QHMPTISIS 342
               A++ +A E+TT+VHG +E      A+   F      D++  +     + +P + +S
Sbjct: 314 AERAAQRALAEELTTLVHGEQECRNVIEASKALFGHGTLADLNPDTLGAALKEVPHVELS 373

Query: 343 KDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNI 402
              V     L+ L    G   S + ARR ++     +NN+ +++ + ++   D      +
Sbjct: 374 G-TVRELPPLVDLFASTGLVPSKSAARRTIQEGGAYLNNAKVTDIEARVSEADLLHGRYL 432

Query: 403 KLSFGKKN 410
            L  GK+N
Sbjct: 433 VLRRGKRN 440


>gi|75760723|ref|ZP_00740746.1| Tyrosyl-tRNA synthetase [Bacillus thuringiensis serovar israelensis
           ATCC 35646]
 gi|206969502|ref|ZP_03230456.1| tyrosyl-tRNA synthetase [Bacillus cereus AH1134]
 gi|218234669|ref|YP_002369456.1| tyrosyl-tRNA synthetase [Bacillus cereus B4264]
 gi|218899815|ref|YP_002448226.1| tyrosyl-tRNA synthetase [Bacillus cereus G9842]
 gi|228903177|ref|ZP_04067311.1| Tyrosyl-tRNA synthetase 1 [Bacillus thuringiensis IBL 4222]
 gi|228923415|ref|ZP_04086702.1| Tyrosyl-tRNA synthetase 1 [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228954932|ref|ZP_04116950.1| Tyrosyl-tRNA synthetase 1 [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|228960931|ref|ZP_04122564.1| Tyrosyl-tRNA synthetase 1 [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|229072165|ref|ZP_04205373.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus F65185]
 gi|229180981|ref|ZP_04308316.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus 172560W]
 gi|74491778|gb|EAO54971.1| Tyrosyl-tRNA synthetase [Bacillus thuringiensis serovar israelensis
           ATCC 35646]
 gi|206735190|gb|EDZ52358.1| tyrosyl-tRNA synthetase [Bacillus cereus AH1134]
 gi|218162626|gb|ACK62618.1| tyrosine--tRNA ligase [Bacillus cereus B4264]
 gi|218542348|gb|ACK94742.1| tyrosyl-tRNA synthetase [Bacillus cereus G9842]
 gi|228602538|gb|EEK60024.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus 172560W]
 gi|228710903|gb|EEL62870.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus F65185]
 gi|228798827|gb|EEM45807.1| Tyrosyl-tRNA synthetase 1 [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|228804753|gb|EEM51354.1| Tyrosyl-tRNA synthetase 1 [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|228836236|gb|EEM81590.1| Tyrosyl-tRNA synthetase 1 [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228856459|gb|EEN00985.1| Tyrosyl-tRNA synthetase 1 [Bacillus thuringiensis IBL 4222]
          Length = 418

 Score =  273 bits (697), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 150/385 (38%), Positives = 222/385 (57%), Gaps = 19/385 (4%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L  L  RG I+Q ++   L+ L  +  V  Y G+D TA SLH GH+  +++L   Q  GH
Sbjct: 4   LQDLEFRGLINQQTDAEGLEQLLEKESVKLYCGFDPTADSLHIGHMLPVLMLRRFQLAGH 63

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           +PI+L+GGGT +IGDPS +   R +     +    E IK   S+F+++      A M NN
Sbjct: 64  QPIALVGGGTGMIGDPSGKKAERTLNTKDTVAYYTESIKNQLSNFLEFENVDNPATMANN 123

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL S+  I  LR+IG  F +N ML+ ++V SRL  E  +SF EF+YMILQ+YDF+ L 
Sbjct: 124 YDWLGSLDVISFLRDIGKNFGLNYMLAKDTVASRL--ETGISFTEFSYMILQSYDFLNLY 181

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKT-PKLFALTSPLLTTASGTKMGKTLSGAIWL 247
           + ++CRLQ+GGSDQWGNI  G++L  + +   K F LT PL+T + GTK GKT  GAIWL
Sbjct: 182 QQHNCRLQIGGSDQWGNITAGLELIRKSEEDAKAFGLTIPLVTKSDGTKFGKTEGGAIWL 241

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATE 305
           + E T+PY F+Q+W N DD DVV + K  T L   EI  + K   +  E   A+K + +E
Sbjct: 242 DPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLSHEEILELEKQVAEAPEKRAAQKALGSE 301

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTL 355
           +T +VHG E  E+A   +   F  S+            + +P++  + ++      L+ L
Sbjct: 302 MTKLVHGEEALEQAIKISAALFSGSVAELTASEIEQGFKDVPSVERTAEDTV----LIDL 357

Query: 356 IVKAGFATSTNEARRHLKSNAIKIN 380
           +V++  + S  +AR  + + AI +N
Sbjct: 358 LVESKISPSKRQAREDVTNGAIYVN 382


>gi|46446803|ref|YP_008168.1| tyrosine-tRNA ligase [Candidatus Protochlamydia amoebophila UWE25]
 gi|81626958|sp|Q6MC06|SYY_PARUW RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|46400444|emb|CAF23893.1| probable tyrosine-tRNA ligase [Candidatus Protochlamydia
           amoebophila UWE25]
          Length = 425

 Score =  272 bits (696), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 152/424 (35%), Positives = 242/424 (57%), Gaps = 16/424 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           ++ + +L ERGFI  +++  E+  L +Q +   Y G+D TA SLH G+L  +M L W Q+
Sbjct: 2   TNVMDVLRERGFIDAVTS-EEIRQLTNQPI-KVYCGFDPTADSLHLGNLVAIMGLAWFQR 59

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH P++++GG T +IGDPS ++  R+++  ++IQ N++ I     + + +      A++
Sbjct: 60  FGHTPVAIVGGATGMIGDPSGKNAERQLLDEKKIQLNLKGISKNLEAILDFNHPTAPAII 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           LNN  W  +  +I  LR++G  F ++ ML+ +SV++RL  E+ +SF EF Y ILQ YDF+
Sbjct: 120 LNNLDWFKNFTFISFLRDVGKLFRLSPMLAKDSVKTRLNSEEGMSFTEFCYQILQGYDFL 179

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L +NY   +++GGSDQWGNI  G DL  ++     + +T PLLT + G K GK+  GA+
Sbjct: 180 HLFENYGVTVELGGSDQWGNITAGTDLIRKVHAKPAYGITFPLLTKSDGQKFGKSEKGAV 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKII 302
           WL+ +  S Y F+Q+   ++DADV++  + LT L M EI   ++M K        A+K +
Sbjct: 240 WLSPDKLSSYEFYQHLIRVEDADVINLMRMLTFLDMGEIRHYEQMMKEADYVPRTAQKRL 299

Query: 303 ATEITTMVHGREE-------AEKAATAAMECFDMSIHSQ---HMPTISISKDEVSRGMGL 352
           A EIT +VHG E         E  A  +    +  I  +    MP+  +  + V     L
Sbjct: 300 AEEITRLVHGEEGLKIAIKVTEGVAPGSQTSLNADILEKLAADMPSCEMKLENV-LNKKL 358

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           + L+V+    TS +EARR L++  + INN  I +E   I ++   S+  I L+ GKKN +
Sbjct: 359 IDLLVETKLQTSKSEARRLLRNGGVYINNKKIEDENHIISVECLISSRLILLAAGKKNKM 418

Query: 413 ICHL 416
           I  L
Sbjct: 419 IIRL 422


>gi|301633473|gb|ADK87027.1| tyrosine--tRNA ligase [Mycoplasma pneumoniae FH]
          Length = 399

 Score =  272 bits (696), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 151/412 (36%), Positives = 230/412 (55%), Gaps = 19/412 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D L++L ERG   Q +  +EL  L +QG    Y+G+D TA SLH G+   L +    Q  
Sbjct: 4   DLLALLKERGLFVQANFEKELKQLLNQGSFAFYVGFDPTAPSLHIGNYVLLHVAQIFQAM 63

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P  L+G GT++IGDP+ R E R+MM  + I EN   IK     F+      ++ +  
Sbjct: 64  GHIPHVLLGSGTALIGDPTGRMELRQMMSRETIAENTRNIKKQIRRFLG-----SNVVFC 118

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
            NETWL  + YI+++RE+G  FSVN+ML+ ++  +R +R   L+ +E NYM+LQAYDF  
Sbjct: 119 QNETWLKKLNYIEVIRELGPCFSVNKMLATDAFSARWER--GLTLMELNYMVLQAYDFYY 176

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + Y  +LQ+GGSDQW NI+ G DL  R    +++ +T+ LL  A+G KMGK+ SGA+W
Sbjct: 177 LNQKYGVQLQIGGSDQWANILAGADLIRRKTQKQVYGMTTNLLVKANGEKMGKSASGALW 236

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           L+ + TSPY+F+QYW N+DDA +      LT L    I+ +  L+G  I EAK  +A E+
Sbjct: 237 LDPQKTSPYDFYQYWINLDDASLQKVFLMLTKLDTKAIETLCNLKGAAIKEAKAKLAFEL 296

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
           T  +HG + A  A   +   F     ++           V  G  L+ +IV  G   S +
Sbjct: 297 TDAIHGTKAALAAQAKSARIFAFQPDTE--------TKTVRAGTRLVDVIVDLGLVVSRS 348

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLCG 418
           EARR ++   + IN   +++ ++ ++     S+  + +  GKK  +   +  
Sbjct: 349 EARRVIQQGGLTINQEKVTDVEMVLQ----ASSQPLVIGKGKKRFVTVQVIA 396


>gi|229076168|ref|ZP_04209136.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus Rock4-18]
 gi|229099139|ref|ZP_04230073.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus Rock3-29]
 gi|228684367|gb|EEL38311.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus Rock3-29]
 gi|228707031|gb|EEL59236.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus Rock4-18]
          Length = 418

 Score =  272 bits (696), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 149/385 (38%), Positives = 224/385 (58%), Gaps = 19/385 (4%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L  L  RG I+Q ++   L+ L  +  V  Y G+D TA SLH GH+  +++L   Q  GH
Sbjct: 4   LQDLEFRGLINQQTDAEGLEQLLEKESVKLYCGFDPTADSLHIGHMLPVLMLRRFQLAGH 63

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           +PI+L+GGGT +IGDPS +   R +     +    E IK   S+F+++   +  A M NN
Sbjct: 64  QPIALVGGGTGMIGDPSGKKAERTLNTKDTVAYYTESIKNQLSNFLEFENVENPATMANN 123

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL ++  I  LR+IG  F +N ML+ ++V SRL  +  +SF EF+YMILQ+YDF+ L 
Sbjct: 124 YDWLGNLDVISFLRDIGKNFGLNYMLAKDTVASRL--DTGISFTEFSYMILQSYDFLNLY 181

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERL-KTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
           +N++CRLQ+GGSDQWGNI  G++L  +  +  K F LT PL+T + GTK GKT  GAIWL
Sbjct: 182 QNHNCRLQIGGSDQWGNITAGLELIRKSEEDAKAFGLTIPLVTKSDGTKFGKTEGGAIWL 241

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATE 305
           + E T+PY F+Q+W N DD DVV + K  T L   EI  + K   +  E   A+K + +E
Sbjct: 242 DPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLSHEEILDLEKQVAEAPEKRAAQKALGSE 301

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTL 355
           +T +VHG E  E+A   +   F  S+            + +P++  + ++      L+ L
Sbjct: 302 MTKLVHGEEALEQAIKISAALFSGSVAELTASEIEQGFKDVPSVERTAEDTV----LIDL 357

Query: 356 IVKAGFATSTNEARRHLKSNAIKIN 380
           +V++  + S  +AR  + + AI +N
Sbjct: 358 LVESKISPSKRQAREDVTNGAIYVN 382


>gi|229019888|ref|ZP_04176686.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus AH1273]
 gi|229026114|ref|ZP_04182491.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus AH1272]
 gi|229032310|ref|ZP_04188283.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus AH1271]
 gi|229175374|ref|ZP_04302889.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus MM3]
 gi|228608206|gb|EEK65513.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus MM3]
 gi|228729090|gb|EEL80093.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus AH1271]
 gi|228735192|gb|EEL85810.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus AH1272]
 gi|228741408|gb|EEL91610.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus AH1273]
          Length = 418

 Score =  272 bits (696), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 149/385 (38%), Positives = 223/385 (57%), Gaps = 19/385 (4%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L  L  RG I+Q ++   L+ L  +  V  Y G+D TA SLH GH+  +++L   Q  GH
Sbjct: 4   LQDLEFRGLINQQTDAEGLEQLLEKESVKLYCGFDPTADSLHIGHMLPVLMLRRFQLAGH 63

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           +PI+L+GGGT +IGDPS +   R +     +    E IK   S+F+++      A M NN
Sbjct: 64  QPIALVGGGTGMIGDPSGKKAERTLNTKDTVAYYTESIKNQLSNFLEFENVDNPATMANN 123

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL ++  I  LR+IG  F +N ML+ ++V SRL  +  +SF EF+YMILQ+YDF+ L 
Sbjct: 124 YDWLGNLDVISFLRDIGKNFGLNYMLAKDTVASRL--DTGISFTEFSYMILQSYDFLNLY 181

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERL-KTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
           +N++CRLQ+GGSDQWGNI  G++L  +  +  K F LT PL+T + GTK GKT  GAIWL
Sbjct: 182 QNHNCRLQIGGSDQWGNITAGLELIRKSEEDAKAFGLTIPLVTKSDGTKFGKTEGGAIWL 241

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATE 305
           + E T+PY F+Q+W N DD DVV + K  T L   EI  + K   +  E   A+K + +E
Sbjct: 242 DPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLSHEEILELEKQVAEAPEKRAAQKALGSE 301

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTL 355
           +T +VHG E  E+A   +   F  S+            + +P++  + ++      L+ L
Sbjct: 302 MTKLVHGEEALEQAIKISAALFSGSVAELTASEIEQGFKDVPSVERTAEDTV----LIDL 357

Query: 356 IVKAGFATSTNEARRHLKSNAIKIN 380
           +V++  + S  +AR  + + AI +N
Sbjct: 358 LVESKISPSKRQAREDVTNGAIYVN 382


>gi|323695192|ref|ZP_08109316.1| tyrosine-tRNA ligase [Clostridium symbiosum WAL-14673]
 gi|323500754|gb|EGB16692.1| tyrosine-tRNA ligase [Clostridium symbiosum WAL-14673]
          Length = 324

 Score =  272 bits (696), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 135/278 (48%), Positives = 182/278 (65%), Gaps = 4/278 (1%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I Q++N  E+  + ++G  T YIG+D TA SLH GH   L L+  LQ  G+KPI
Sbjct: 46  LVARGLIAQVTNEEEIGNMINEGKATFYIGFDPTADSLHVGHFMALCLMKRLQMAGNKPI 105

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GGGT +IGDPS R++ R+MM  + IQ N +  K   S FI +  GK  A+M+NN  W
Sbjct: 106 ALLGGGTGMIGDPSGRNDLRQMMTVETIQHNCDCFKQQMSRFIDFSEGK--AMMVNNAEW 163

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L  + Y++LLRE+G  FSVNRML+ E  + R+  E+ L+FLEFNYMI+Q+YDF  L + Y
Sbjct: 164 LMGLNYVELLREVGPHFSVNRMLAAECYKQRM--EKGLTFLEFNYMIMQSYDFYMLFQKY 221

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
            C +Q GG DQW N++ G +L  R       A+T  LL  + G KMGKT SGA+WL+   
Sbjct: 222 GCNMQFGGDDQWSNMLGGTELIRRKLGKDAHAMTITLLLNSEGKKMGKTQSGAVWLDPNK 281

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK 289
           TSP+ F+QYWRNI DADV+   + LT LP+ +I+ M K
Sbjct: 282 TSPFEFYQYWRNIADADVLKCLRMLTFLPIEQINEMDK 319


>gi|296505129|ref|YP_003666829.1| tyrosyl-tRNA synthetase [Bacillus thuringiensis BMB171]
 gi|296326181|gb|ADH09109.1| tyrosyl-tRNA synthetase [Bacillus thuringiensis BMB171]
          Length = 418

 Score =  272 bits (696), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 150/385 (38%), Positives = 222/385 (57%), Gaps = 19/385 (4%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L  L  RG I+Q ++   L+ L  +  V  Y G+D TA SLH GH+  +++L   Q  GH
Sbjct: 4   LQDLEFRGLINQQTDAEGLEQLLEKESVKLYCGFDPTADSLHIGHMLPVLMLRRFQLAGH 63

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           +PI+L+GGGT +IGDPS +   R +     +    E IK   S+F+++      A M NN
Sbjct: 64  QPIALVGGGTGMIGDPSGKKAERTLNTKDTVAYYTESIKNQLSNFLEFENVDNPATMANN 123

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL S+  I  LR+IG  F +N ML+ ++V SRL  E  +SF EF+YMILQ+YDF+ L 
Sbjct: 124 YDWLGSLDVISFLRDIGKNFGLNYMLAKDTVASRL--ETGISFTEFSYMILQSYDFLNLY 181

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERL-KTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
           + ++CRLQ+GGSDQWGNI  G++L  +  +  K F LT PL+T + GTK GKT  GAIWL
Sbjct: 182 QQHNCRLQIGGSDQWGNITAGLELIRKSEEDAKAFGLTIPLVTKSDGTKFGKTEGGAIWL 241

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATE 305
           + E T+PY F+Q+W N DD DVV + K  T L   EI  + K   +  E   A+K ++ E
Sbjct: 242 DPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLSHEEILELEKQVAEAPEKRAAQKALSAE 301

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTL 355
           +T +VHG E  E+A   +   F  S+            + +P++  + ++      L+ L
Sbjct: 302 MTKLVHGEEALEQAIKISAALFSGSVAELTASEIEQGFKDVPSVERTAEDTV----LIDL 357

Query: 356 IVKAGFATSTNEARRHLKSNAIKIN 380
           +V++  + S  +AR  + + AI +N
Sbjct: 358 LVESKISPSKRQAREDVTNGAIYVN 382


>gi|228910512|ref|ZP_04074326.1| Tyrosyl-tRNA synthetase 1 [Bacillus thuringiensis IBL 200]
 gi|229152861|ref|ZP_04281044.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus m1550]
 gi|228630681|gb|EEK87327.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus m1550]
 gi|228849076|gb|EEM93916.1| Tyrosyl-tRNA synthetase 1 [Bacillus thuringiensis IBL 200]
          Length = 418

 Score =  272 bits (696), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 150/385 (38%), Positives = 221/385 (57%), Gaps = 19/385 (4%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L  L  RG I+Q ++   L+ L  +  V  Y G+D TA SLH GH+  +++L   Q  GH
Sbjct: 4   LQDLEFRGLINQQTDAEGLEQLLEKESVKLYCGFDPTADSLHIGHMLPVLMLRRFQLAGH 63

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           +PI+L+GGGT +IGDPS +   R +     +    E IK   S+F+++      A M NN
Sbjct: 64  QPIALVGGGTGMIGDPSGKKAERTLNTKDTVAYYTESIKNQLSNFLEFENVDNPATMANN 123

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL S+  I  LR+IG  F +N ML+ ++V SRL  E  +SF EF+YMILQ+YDF+ L 
Sbjct: 124 YDWLGSLDVISFLRDIGKNFGLNYMLAKDTVASRL--ETGISFTEFSYMILQSYDFLNLY 181

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKT-PKLFALTSPLLTTASGTKMGKTLSGAIWL 247
           + ++CRLQ+GGSDQWGNI  G++L  + +   K F LT PL+T + GTK GKT  GAIWL
Sbjct: 182 QQHNCRLQIGGSDQWGNITAGLELIRKSEEDAKAFGLTIPLVTKSDGTKFGKTEGGAIWL 241

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATE 305
           + E T+PY F+Q+W N DD DVV + K  T L   EI  + K   +  E   A+K +  E
Sbjct: 242 DPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLSHEEILELEKQVAEAPEKRAAQKALGAE 301

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTL 355
           +T +VHG E  E+A   +   F  S+            + +P++  + ++      L+ L
Sbjct: 302 MTKLVHGEEALEQAIKISAALFSGSVAELTASEIEQGFKDVPSVERTAEDTV----LIDL 357

Query: 356 IVKAGFATSTNEARRHLKSNAIKIN 380
           +V++  + S  +AR  + + AI +N
Sbjct: 358 LVESKISPSKRQAREDVTNGAIYVN 382


>gi|325674262|ref|ZP_08153951.1| tyrosine--tRNA ligase [Rhodococcus equi ATCC 33707]
 gi|325554942|gb|EGD24615.1| tyrosine--tRNA ligase [Rhodococcus equi ATCC 33707]
          Length = 425

 Score =  272 bits (696), Expect = 7e-71,   Method: Compositional matrix adjust.
 Identities = 152/416 (36%), Positives = 233/416 (56%), Gaps = 15/416 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + L  L+ RG I Q ++   L      G VT Y G+D T  SLHAGHL  L+ L   Q+ 
Sbjct: 4   NILDELTWRGLIAQSTDLDALRRETEAGPVTLYAGFDPTGPSLHAGHLVPLLALKRFQRA 63

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQE-IQENIEKIKGIFSSFIKYGTGKTDALM 125
           GH+PI + GG T +IGDP  RD   R+M + + + +  ++I+     F+ +    T A++
Sbjct: 64  GHRPIVMAGGATGMIGDP--RDVGERVMNTADTVADWADRIRSQLERFVDFDESPTGAVI 121

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
            NN  W   +  ID LR++G  FSVN ML+ ++V+ RL+ +  +S+ EF+YM+LQA DFV
Sbjct: 122 ENNANWTSKLTAIDFLRDVGKHFSVNVMLARDTVKRRLETD-GISYTEFSYMLLQANDFV 180

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK-TLSGA 244
            L +NY C LQ+GGSDQWGNII G+DL  +L    + A+T PL+T+A G K GK T  G+
Sbjct: 181 HLRRNYGCTLQVGGSDQWGNIIAGVDLNRKLDGESVHAMTVPLVTSADGKKFGKSTGGGS 240

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKKII 302
           +WL+ EMTSPY ++QY+ N  DADVV + +  T L   E+  +  A  +  +  EA++ +
Sbjct: 241 LWLDPEMTSPYAWYQYFVNTGDADVVKYLRWFTFLTQEELAELEVATAERPQAREAQRRL 300

Query: 303 ATEITTMVHGREEAEKAATAAMECF--------DMSIHSQHMPTISISKDEVSRGMGLLT 354
           A E+TT+VHG+   +    A+   F        D S  +  +   SI++        ++ 
Sbjct: 301 AAEMTTLVHGQANTDAVELASKALFGRAELTDLDESTLAAALKEASIAEVAGDAPRTIVD 360

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
           L+V +G + S   ARR +K     +NN  + ++    +  D      + +  G+KN
Sbjct: 361 LLVASGLSESKGAARRAVKEGGAYVNNQRVESDDWTPESSDLLHGRWLVIRRGRKN 416


>gi|229147228|ref|ZP_04275585.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus BDRD-ST24]
 gi|228636237|gb|EEK92710.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus BDRD-ST24]
          Length = 418

 Score =  272 bits (696), Expect = 7e-71,   Method: Compositional matrix adjust.
 Identities = 150/385 (38%), Positives = 221/385 (57%), Gaps = 19/385 (4%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L  L  RG I+Q ++   L+ L  +  V  Y G+D TA SLH GH+  +++L   Q  GH
Sbjct: 4   LQDLEFRGLINQQTDAEGLEQLLEKESVKLYCGFDPTADSLHIGHMLPVLMLRRFQLAGH 63

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           +PI+L+GGGT +IGDPS +   R +     +    E IK   S+F+++      A M NN
Sbjct: 64  QPIALVGGGTGMIGDPSGKKAERTLNTKDTVAYYTESIKNQLSNFLEFENVDNPATMANN 123

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL S+  I  LR+IG  F +N ML+ ++V SRL  E  +SF EF+YMILQ+YDF+ L 
Sbjct: 124 YDWLGSLDVISFLRDIGKNFGLNYMLAKDTVASRL--ETGISFTEFSYMILQSYDFLNLY 181

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKT-PKLFALTSPLLTTASGTKMGKTLSGAIWL 247
           + ++CRLQ+GGSDQWGNI  G++L  + +   K F LT PL+T + GTK GKT  GAIWL
Sbjct: 182 QQHNCRLQIGGSDQWGNITAGLELIRKSEEDAKAFGLTIPLVTKSDGTKFGKTEGGAIWL 241

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATE 305
           + E T+PY F+Q+W N DD DVV + K  T L   EI  + K   +  E   A+K +  E
Sbjct: 242 DPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLSHEEILELEKQVAEAPEKRAAQKALGAE 301

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTL 355
           +T +VHG E  E+A   +   F  S+            + +P++  + ++      L+ L
Sbjct: 302 MTKLVHGEEALEQAIKISAALFSGSVAELTASEIEQGFKDVPSVERTAEDTV----LIDL 357

Query: 356 IVKAGFATSTNEARRHLKSNAIKIN 380
           +V++  + S  +AR  + + AI +N
Sbjct: 358 LVESKISPSKRQAREDVTNGAIYVN 382


>gi|229105287|ref|ZP_04235936.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus Rock3-28]
 gi|228678213|gb|EEL32441.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus Rock3-28]
          Length = 418

 Score =  272 bits (696), Expect = 7e-71,   Method: Compositional matrix adjust.
 Identities = 149/385 (38%), Positives = 223/385 (57%), Gaps = 19/385 (4%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L  L  RG I+Q ++   L+ L  +  V  Y G+D TA SLH GH+  +++L   Q  GH
Sbjct: 4   LQDLEFRGLINQQTDAEGLEQLLEKESVKLYCGFDPTADSLHIGHMLPVLMLRRFQLAGH 63

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           +PI+L+GGGT +IGDPS +   R +     +    E IK   S+F+++      A M NN
Sbjct: 64  QPIALVGGGTGMIGDPSGKKAERTLNTKDTVAYYTESIKNQLSNFLEFENVDNPATMANN 123

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL ++  I  LR+IG  F +N ML+ ++V SRL  +  +SF EF+YMILQ+YDF+ L 
Sbjct: 124 YDWLGNLDVISFLRDIGKNFGLNYMLAKDTVASRL--DTGISFTEFSYMILQSYDFLNLY 181

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERL-KTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
           +N++CRLQ+GGSDQWGNI  G++L  +  +  K F LT PL+T + GTK GKT  GAIWL
Sbjct: 182 QNHNCRLQIGGSDQWGNITAGLELIRKSEEDAKAFGLTIPLVTKSDGTKFGKTEGGAIWL 241

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATE 305
           + E T+PY F+Q+W N DD DVV + K  T L   EI  + K   +  E   A+K + +E
Sbjct: 242 DPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLSHEEILELEKQVAEAPEKRAAQKALGSE 301

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTL 355
           +T +VHG E  E+A   +   F  S+            + +P++  + ++      L+ L
Sbjct: 302 MTKLVHGEEALEQAIKISAALFSGSVAELTANEIEQGFKDVPSVERTAEDTV----LIDL 357

Query: 356 IVKAGFATSTNEARRHLKSNAIKIN 380
           +V++  + S  +AR  + + AI +N
Sbjct: 358 LVESKISPSKRQAREDVTNGAIYVN 382


>gi|228967760|ref|ZP_04128776.1| Tyrosyl-tRNA synthetase 1 [Bacillus thuringiensis serovar sotto
           str. T04001]
 gi|228791914|gb|EEM39500.1| Tyrosyl-tRNA synthetase 1 [Bacillus thuringiensis serovar sotto
           str. T04001]
          Length = 418

 Score =  272 bits (696), Expect = 7e-71,   Method: Compositional matrix adjust.
 Identities = 150/385 (38%), Positives = 222/385 (57%), Gaps = 19/385 (4%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L  L  RG I+Q ++   L+ L  +  V  Y G+D TA SLH GH+  +++L   Q  GH
Sbjct: 4   LQDLEFRGLINQQTDAEGLEQLLEKESVKLYCGFDPTADSLHIGHMLPVLMLRRFQLAGH 63

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           +PI+L+GGGT +IGDPS +   R +     +    E IK   S+F+++      A M NN
Sbjct: 64  QPIALVGGGTGMIGDPSGKKAERTLNTKDTVAYYTESIKNQLSNFLEFENVDNPATMANN 123

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL S+  I  LR+IG  F +N ML+ ++V SRL  E  +SF EF+YMILQ+YDF+ L 
Sbjct: 124 YDWLGSLDVISFLRDIGKNFGLNYMLAKDTVASRL--ETGISFTEFSYMILQSYDFLNLY 181

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKT-PKLFALTSPLLTTASGTKMGKTLSGAIWL 247
           + ++CRLQ+GGSDQWGNI  G++L  + +   K F LT PL+T + GTK GKT  GAIWL
Sbjct: 182 QQHNCRLQIGGSDQWGNITAGLELIRKSEEDAKAFGLTIPLVTKSDGTKFGKTEGGAIWL 241

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATE 305
           + E T+PY F+Q+W N DD DVV + K  T L   EI  + K   +  E   A+K + +E
Sbjct: 242 DPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLSHEEILELEKQVAEAPEKRAAQKALGSE 301

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTL 355
           +T +VHG E  E+A   +   F  S+            + +P++  + ++      L+ L
Sbjct: 302 MTKLVHGEEAFEQAIKISAALFSGSVAELTASEIEQGFKDVPSVERTAEDTV----LIDL 357

Query: 356 IVKAGFATSTNEARRHLKSNAIKIN 380
           +V++  + S  +AR  + + AI +N
Sbjct: 358 LVESKISPSKRQAREDVTNGAIYVN 382


>gi|297182713|gb|ADI18869.1| tyrosyl-tRNA synthetase [uncultured Pseudomonadales bacterium
           HF0010_05E14]
          Length = 433

 Score =  272 bits (695), Expect = 7e-71,   Method: Compositional matrix adjust.
 Identities = 162/431 (37%), Positives = 239/431 (55%), Gaps = 28/431 (6%)

Query: 8   FLSILSERGFIHQISNPRELDI-LCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           F+S L  RG I+Q S   +L+  L S+   T Y G+D TA SLH GHL  L++L   Q  
Sbjct: 8   FISSLESRGLIYQKSGSDDLEEHLNSER--TVYCGFDPTADSLHLGHLVPLLMLKRFQLA 65

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKPI+L+GG T +IGDPSF+   R++  ++ +++   KI     + I     K+ ++ +
Sbjct: 66  GHKPIALVGGATGLIGDPSFKATERKLHSAEIVEQWALKITSQIENLINVDELKSVSI-I 124

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDFV 185
           NN +WL  IK +D LR+IG +FS+N +++ ESV+ R++RE + +S+ EF+Y ++QA DF 
Sbjct: 125 NNASWLSEIKMLDFLRDIGKYFSINNLIAKESVKKRIEREGEGISYTEFSYSLVQALDFA 184

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           +L K  DC +Q+GGSDQWGNI+ GI+L  R    + F +T PL+T + GTK GKT SG++
Sbjct: 185 QLYKQVDCTIQVGGSDQWGNIVSGIELNRRESKTQCFGITVPLITKSDGTKFGKTESGSV 244

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIA 303
           WL+ + TSPY F+Q+W  ++D DV  F    T L    I ++        N+  A+ I+A
Sbjct: 245 WLDSKKTSPYMFYQFWLRVEDEDVYKFLNFFTFLSEEYIQQVKINDESSKNKPIAQSILA 304

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHS-----------QHMPTISISKDEVSRGMGL 352
            E+T  VHG+E  + A       F  S  +             +P + I  D     + L
Sbjct: 305 EEVTRFVHGQEHLDAAKRITNALFSNSAENLLQGDFKQLALDGLPHV-ILGDADKSSLSL 363

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEK-------LQIKLQDFDSTGNIKLS 405
             LIV AG   S  E +  LK  AI IN  I+S E               +D+   IK+ 
Sbjct: 364 SKLIVDAGITKSGREVKDALKRGAISINGKIVSPEDGFNMDSLFAKDHSQYDNYFLIKV- 422

Query: 406 FGKKNHIICHL 416
            GKK H++  L
Sbjct: 423 -GKKKHLLVSL 432


>gi|229087219|ref|ZP_04219366.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus Rock3-44]
 gi|228696100|gb|EEL48938.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus Rock3-44]
          Length = 418

 Score =  272 bits (695), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 150/385 (38%), Positives = 222/385 (57%), Gaps = 19/385 (4%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L  L  RG I+Q ++   L+ L  +  V  Y G+D TA SLH GH+  +++L   Q  GH
Sbjct: 4   LQDLEFRGLINQQTDAEGLEQLLEKESVKLYCGFDPTADSLHIGHMLPVLMLRRFQLAGH 63

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           +PI+L+GGGT +IGDPS +   R +     +    E IK   S+F+++      A M NN
Sbjct: 64  QPIALVGGGTGMIGDPSGKKAERTLNTKDTVAYYTESIKNQLSNFLEFENVDNPATMANN 123

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL ++  I  LR+IG  F +N ML+ ++V SRL  E  +SF EF+YMILQ+YDF+ L 
Sbjct: 124 YDWLGNLDVITFLRDIGKNFGLNYMLAKDTVASRL--ETGISFTEFSYMILQSYDFLNLY 181

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKT-PKLFALTSPLLTTASGTKMGKTLSGAIWL 247
           + ++CRLQ+GGSDQWGNI  G++L  + +   K F LT PL+T + GTK GKT  GAIWL
Sbjct: 182 QQHNCRLQIGGSDQWGNITAGLELIRKSEEDAKAFGLTIPLVTKSDGTKFGKTEGGAIWL 241

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATE 305
           + E T+PY F+Q+W N DD DVV + K  T L   EI  + K   +  E   A+K + +E
Sbjct: 242 DPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLSHEEILELEKQVAEAPEKRAAQKALGSE 301

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTL 355
           +T +VHG E  E+A   +   F  S+            + +P++  S ++      L+ L
Sbjct: 302 MTKLVHGEEALEQAIKISAALFSGSVAELTASEIEQGFKDVPSVERSAEDTV----LIDL 357

Query: 356 IVKAGFATSTNEARRHLKSNAIKIN 380
           +V++  + S  +AR  + + AI +N
Sbjct: 358 LVESKISPSKRQAREDVTNGAIYVN 382


>gi|163942389|ref|YP_001647273.1| tyrosyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
 gi|229062344|ref|ZP_04199662.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus AH603]
 gi|229169389|ref|ZP_04297099.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus AH621]
 gi|163864586|gb|ABY45645.1| tyrosyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
 gi|228614152|gb|EEK71267.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus AH621]
 gi|228716949|gb|EEL68633.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus AH603]
          Length = 418

 Score =  272 bits (695), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 149/385 (38%), Positives = 223/385 (57%), Gaps = 19/385 (4%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L  L  RG I+Q ++   L+ L  +  V  Y G+D TA SLH GH+  +++L   Q  GH
Sbjct: 4   LQDLEFRGLINQQTDAEGLEQLLEKESVKLYCGFDPTADSLHIGHMLPVLMLRRFQLAGH 63

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           +PI+L+GGGT +IGDPS +   R +     +    E IK   S+F+++      A M NN
Sbjct: 64  QPIALVGGGTGMIGDPSGKKAERTLNTKDTVAYYTESIKNQLSNFLEFENVDNPATMANN 123

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL ++  I  LR+IG  F +N ML+ ++V SRL  +  +SF EF+YMILQ+YDF+ L 
Sbjct: 124 YDWLGNLDVISFLRDIGKNFGLNYMLAKDTVASRL--DTGISFTEFSYMILQSYDFLNLY 181

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERL-KTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
           +N++CRLQ+GGSDQWGNI  G++L  +  +  K F LT PL+T + GTK GKT  GAIWL
Sbjct: 182 QNHNCRLQIGGSDQWGNITAGLELIRKSEEDAKAFGLTIPLVTKSDGTKFGKTEGGAIWL 241

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATE 305
           + E T+PY F+Q+W N DD DVV + K  T L   EI  + K   +  E   A+K + +E
Sbjct: 242 DPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLSHEEILELEKQVTEAPEKRAAQKSLGSE 301

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTL 355
           +T +VHG E  E+A   +   F  S+            + +P++  + ++      L+ L
Sbjct: 302 MTKLVHGEEALEQAIKISAALFSGSVAELTASEIEQGFKDVPSVERTAEDTV----LIDL 357

Query: 356 IVKAGFATSTNEARRHLKSNAIKIN 380
           +V++  + S  +AR  + + AI +N
Sbjct: 358 LVESKISPSKRQAREDVTNGAIYVN 382


>gi|30264732|ref|NP_847109.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. Ames]
 gi|47530205|ref|YP_021554.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49187550|ref|YP_030803.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|49481693|ref|YP_038706.1| tyrosyl-tRNA synthetase [Bacillus thuringiensis serovar konkukian
           str. 97-27]
 gi|52140844|ref|YP_085985.1| tyrosyl-tRNA synthetase [Bacillus cereus E33L]
 gi|118479801|ref|YP_896952.1| tyrosyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
 gi|165869597|ref|ZP_02214255.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|167634052|ref|ZP_02392375.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. A0442]
 gi|167638031|ref|ZP_02396309.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. A0193]
 gi|170685688|ref|ZP_02876911.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. A0465]
 gi|177651320|ref|ZP_02934151.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. A0174]
 gi|196033099|ref|ZP_03100512.1| tyrosyl-tRNA synthetase [Bacillus cereus W]
 gi|218905888|ref|YP_002453722.1| tyrosyl-tRNA synthetase [Bacillus cereus AH820]
 gi|222098132|ref|YP_002532189.1| tyrosyl-tRNA synthetase [Bacillus cereus Q1]
 gi|225866644|ref|YP_002752022.1| tyrosyl-tRNA synthetase [Bacillus cereus 03BB102]
 gi|227817451|ref|YP_002817460.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. CDC 684]
 gi|228917309|ref|ZP_04080864.1| Tyrosyl-tRNA synthetase 1 [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|228929712|ref|ZP_04092729.1| Tyrosyl-tRNA synthetase 1 [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228935970|ref|ZP_04098780.1| Tyrosyl-tRNA synthetase 1 [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228948407|ref|ZP_04110690.1| Tyrosyl-tRNA synthetase 1 [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|228987909|ref|ZP_04148017.1| Tyrosyl-tRNA synthetase 1 [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|229093761|ref|ZP_04224860.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus Rock3-42]
 gi|229124228|ref|ZP_04253420.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus 95/8201]
 gi|229186921|ref|ZP_04314076.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus BGSC 6E1]
 gi|229198819|ref|ZP_04325513.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus m1293]
 gi|229604566|ref|YP_002868940.1| tyrosine--tRNA ligase [Bacillus anthracis str. A0248]
 gi|254687471|ref|ZP_05151327.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. CNEVA-9066]
 gi|254725033|ref|ZP_05186816.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. A1055]
 gi|254741808|ref|ZP_05199495.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. Kruger B]
 gi|254754594|ref|ZP_05206629.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. Vollum]
 gi|254757426|ref|ZP_05209453.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. Australia 94]
 gi|81394595|sp|Q6HCM0|SYY1_BACHK RecName: Full=Tyrosyl-tRNA synthetase 1; AltName:
           Full=Tyrosine--tRNA ligase 1; Short=TyrRS 1
 gi|81685883|sp|Q633D2|SYY1_BACCZ RecName: Full=Tyrosyl-tRNA synthetase 1; AltName:
           Full=Tyrosine--tRNA ligase 1; Short=TyrRS 1
 gi|81714900|sp|Q81KS9|SYY1_BACAN RecName: Full=Tyrosyl-tRNA synthetase 1; AltName:
           Full=Tyrosine--tRNA ligase 1; Short=TyrRS 1
 gi|30259407|gb|AAP28595.1| tyrosine--tRNA ligase [Bacillus anthracis str. Ames]
 gi|47505353|gb|AAT34029.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49181477|gb|AAT56853.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|49333249|gb|AAT63895.1| tyrosine--tRNA ligase (tyrosyl-tRNA synthetase) [Bacillus
           thuringiensis serovar konkukian str. 97-27]
 gi|51974313|gb|AAU15863.1| tyrosine--tRNA ligase (tyrosyl-tRNA synthetase) [Bacillus cereus
           E33L]
 gi|118419026|gb|ABK87445.1| tyrosyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
 gi|164714426|gb|EDR19945.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|167513848|gb|EDR89216.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. A0193]
 gi|167530853|gb|EDR93555.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. A0442]
 gi|170670152|gb|EDT20892.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. A0465]
 gi|172083146|gb|EDT68208.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. A0174]
 gi|195994528|gb|EDX58483.1| tyrosyl-tRNA synthetase [Bacillus cereus W]
 gi|218538126|gb|ACK90524.1| tyrosyl-tRNA synthetase [Bacillus cereus AH820]
 gi|221242190|gb|ACM14900.1| tyrosine--tRNA ligase (tyrosyl-tRNA synthetase) [Bacillus cereus
           Q1]
 gi|225788112|gb|ACO28329.1| tyrosine--tRNA ligase [Bacillus cereus 03BB102]
 gi|227004662|gb|ACP14405.1| tyrosine--tRNA ligase [Bacillus anthracis str. CDC 684]
 gi|228584655|gb|EEK42779.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus m1293]
 gi|228596658|gb|EEK54323.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus BGSC 6E1]
 gi|228659530|gb|EEL15178.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus 95/8201]
 gi|228689646|gb|EEL43454.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus Rock3-42]
 gi|228771832|gb|EEM20290.1| Tyrosyl-tRNA synthetase 1 [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|228811394|gb|EEM57732.1| Tyrosyl-tRNA synthetase 1 [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|228823738|gb|EEM69560.1| Tyrosyl-tRNA synthetase 1 [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228829891|gb|EEM75511.1| Tyrosyl-tRNA synthetase 1 [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228842350|gb|EEM87443.1| Tyrosyl-tRNA synthetase 1 [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|229268974|gb|ACQ50611.1| tyrosine--tRNA ligase [Bacillus anthracis str. A0248]
          Length = 418

 Score =  272 bits (695), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 149/385 (38%), Positives = 223/385 (57%), Gaps = 19/385 (4%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L  L  RG I+Q ++   L+ L  +  V  Y G+D TA SLH GH+  +++L   Q  GH
Sbjct: 4   LQDLEFRGLINQQTDAEGLEQLLEKESVKLYCGFDPTADSLHIGHMLPVLMLRRFQLAGH 63

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           +PI+L+GGGT +IGDPS +   R +     +    E IK   S+F+++   +  A M NN
Sbjct: 64  QPIALVGGGTGMIGDPSGKKAERTLNTKDTVAYYTESIKNQLSNFLEFENVENPATMANN 123

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL ++  I  LR+IG  F +N ML+ ++V SRL  E  +SF EF+YMILQ+YDF+ L 
Sbjct: 124 YDWLGNLDVISFLRDIGKNFGLNYMLAKDTVASRL--ETGISFTEFSYMILQSYDFLNLY 181

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKT-PKLFALTSPLLTTASGTKMGKTLSGAIWL 247
           ++++CRLQ+GGSDQWGNI  G++L  + +   K F LT PL+T + GTK GKT  GAIWL
Sbjct: 182 QHHNCRLQIGGSDQWGNITAGLELIRKSEEDAKAFGLTIPLVTKSDGTKFGKTEGGAIWL 241

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATE 305
           + E T+PY F+Q+W N DD DVV + K  T L   EI  + K   +  E   A+K +  E
Sbjct: 242 DPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLSHEEILELEKQVAEAPEKRAAQKALGAE 301

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTL 355
           +T +VHG E  E+A   +   F  S+            + +P++  + ++      L+ L
Sbjct: 302 MTKLVHGEEALEQAIKISAALFSGSVAELTASEIEQGFKDVPSVERTAEDTV----LIDL 357

Query: 356 IVKAGFATSTNEARRHLKSNAIKIN 380
           +V++  + S  +AR  + + AI +N
Sbjct: 358 LVESKISPSKRQAREDVTNGAIYVN 382


>gi|313891059|ref|ZP_07824678.1| tyrosine--tRNA ligase [Streptococcus pseudoporcinus SPIN 20026]
 gi|313120422|gb|EFR43542.1| tyrosine--tRNA ligase [Streptococcus pseudoporcinus SPIN 20026]
          Length = 420

 Score =  272 bits (695), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 148/417 (35%), Positives = 227/417 (54%), Gaps = 21/417 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG + Q ++   L    ++G V+ Y GYD TA SLH GHL  ++    LQ  GHKP 
Sbjct: 7   LKARGLVFQTTDEEALVKALTEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAGHKPY 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+D  R +   + + +   KIKG  S F+ +  G+  A ++NN  W
Sbjct: 67  ALVGGATGLIGDPSFKDAERSLQTKETVLDWSAKIKGQLSQFLDFENGENKAELVNNYDW 126

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
              I +ID LR++G +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF EL   +
Sbjct: 127 FSQISFIDFLRDVGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFYELNDKH 184

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
           +  LQ+GGSDQWGN+  G +L  R        +T PL+T ASG K GK+   A+WL+ + 
Sbjct: 185 NVTLQIGGSDQWGNMTAGTELLRRKSDKIAHVMTVPLITDASGKKFGKSEGNAVWLDADK 244

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATEITTM 309
           TSPY  +Q+W N+ D D V F K  T L + EI  + +      +E  A+K +A E+ T+
Sbjct: 245 TSPYEMYQFWLNVMDDDAVRFLKIFTFLSLQEIAEIEEAFNLARHERLAQKTLAREVVTL 304

Query: 310 VHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIVKA 359
           VHG E  ++A     + F  +I             ++P  ++  D+    + ++ ++V +
Sbjct: 305 VHGEEAYKQAVNITEQLFAGNIKQLSATELKQGLSNVPNYAVQTDD---SLNIVDILVSS 361

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN--IKLSFGKKNHIIC 414
             +TS  +AR  +++ AI IN   + +  L   L D D        +  GKK + + 
Sbjct: 362 KISTSKRQAREDVQNGAIYINGERVQD--LNYVLSDTDKIDGQLTAIRRGKKKYFVL 416


>gi|229048365|ref|ZP_04193933.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus AH676]
 gi|228723090|gb|EEL74467.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus AH676]
          Length = 418

 Score =  272 bits (695), Expect = 9e-71,   Method: Compositional matrix adjust.
 Identities = 150/389 (38%), Positives = 224/389 (57%), Gaps = 19/389 (4%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L  L  RG I+Q ++   L+ L  +  V  Y G+D TA SLH GH+  +++L   Q  GH
Sbjct: 4   LQDLEFRGLINQQTDAEGLEQLLEKESVKLYCGFDPTADSLHIGHMLPVLMLRRFQLAGH 63

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           +PI+L+GGGT +IGDPS +   R +     +    E IK   S+F+++      A M NN
Sbjct: 64  QPIALVGGGTGMIGDPSGKKAERTLNTKDTVAYYTESIKNQLSNFLEFENVDNPATMANN 123

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL ++  I  LR+IG  F +N ML+ ++V SRL  E  +SF EF+YMILQ+YDF+ L 
Sbjct: 124 YDWLGNLDVISFLRDIGKNFGLNYMLAKDTVASRL--ETGISFTEFSYMILQSYDFLNLY 181

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKT-PKLFALTSPLLTTASGTKMGKTLSGAIWL 247
           ++++CRLQ+GGSDQWGNI  G++L  + +   K F LT PL+T + GTK GKT  GAIWL
Sbjct: 182 QHHNCRLQIGGSDQWGNITAGLELIRKSEEDAKAFGLTIPLVTKSDGTKFGKTEGGAIWL 241

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATE 305
           + E T+PY F+Q+W N DD DVV + K  T L   EI  + K   +  E   A+K + +E
Sbjct: 242 DPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLSHEEILELEKQVAEAPEKRAAQKALGSE 301

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTL 355
           +T +VHG E  E+A   +   F  S+            + +P++  + ++      L+ L
Sbjct: 302 MTKLVHGEEALEQAIKISAALFSGSVAELTASEIEQGFKDVPSVERTAEDTV----LIDL 357

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSII 384
           +V++  + S  +AR  + + AI +N   I
Sbjct: 358 LVESKISPSKRQAREDVTNGAIYVNGERI 386


>gi|254291176|ref|ZP_04961972.1| tyrosyl-tRNA synthetase [Vibrio cholerae AM-19226]
 gi|150422870|gb|EDN14821.1| tyrosyl-tRNA synthetase [Vibrio cholerae AM-19226]
          Length = 434

 Score =  272 bits (695), Expect = 9e-71,   Method: Compositional matrix adjust.
 Identities = 160/422 (37%), Positives = 231/422 (54%), Gaps = 23/422 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG I Q S P E  +         Y G+D TA SLH GHL  L++L   Q  GH+ I
Sbjct: 18  LQQRGLIAQ-STPLEALVERFATPQVLYCGFDPTAGSLHIGHLVPLLMLKRFQNAGHQAI 76

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM-LNNET 130
           +L+GG T +IGDPSF+   R +  +Q +Q+ +  +    +  +   +    +LM +NN  
Sbjct: 77  ALIGGATGMIGDPSFKANERVLNSAQTVQQWVSDLSQQITQLMTSQSENCASLMTVNNAD 136

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDFVELAK 189
           W+  I  ID  R++G  FSVN M++ ESV+ RL R +Q +SF EF+Y +LQ+YDF  L +
Sbjct: 137 WIGKINLIDFFRDVGKHFSVNAMINRESVKQRLARPDQGISFTEFSYSLLQSYDFAHLNR 196

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
            + C LQ+GG+DQWGNI+ GIDL  RL   ++  LT PL+T + GTK GKT SGA+WL  
Sbjct: 197 EFGCALQIGGNDQWGNIVSGIDLTRRLNGTEVCGLTLPLITKSDGTKFGKTESGAVWLES 256

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEIT 307
             TSPY F+Q+W N DDADV  F    T L  +EI+  R A        +A++I+A  +T
Sbjct: 257 SKTSPYRFYQFWLNSDDADVYRFLAYYTFLSTAEIEEIRQADTLRAGKPQAQQILAEHVT 316

Query: 308 TMVHGRE--EAEKAATAAMECFDMSIHS---------QHMPTISISKDEVSRGMGLLTLI 356
             VHG E   A +  T A+   D+S  S           +P ++ S+ +      LL  +
Sbjct: 317 RFVHGEEGLAAAQRITQALFSGDVSYLSLSELAQLELDGLPCVAASRTD-----SLLDFL 371

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           + +G A+S  +AR  L++ AI++N   +  E +      FD      L  GKK   +  L
Sbjct: 372 LSSGLASSKRQAREWLENGAIRVNGERVQQEGMLSGFALFDRY--YVLQRGKKQFALIKL 429

Query: 417 CG 418
            G
Sbjct: 430 EG 431


>gi|229118149|ref|ZP_04247508.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus Rock1-3]
 gi|228665372|gb|EEL20855.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus Rock1-3]
          Length = 418

 Score =  271 bits (694), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 149/385 (38%), Positives = 223/385 (57%), Gaps = 19/385 (4%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L  L  RG I+Q ++   L+ L  +  V  Y G+D TA SLH GH+  +++L   Q  GH
Sbjct: 4   LQDLEFRGLINQQTDAEGLEQLLEKESVKLYCGFDPTADSLHIGHMLPVLMLRRFQLAGH 63

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           +PI+L+GGGT +IGDPS +   R +     +    E IK   S+F+++      A M NN
Sbjct: 64  QPIALVGGGTGMIGDPSGKKAERTLNTKDTVAYYTESIKNQLSNFLEFENVDNPATMANN 123

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL ++  I  LR+IG  F +N ML+ ++V SRL  E  +SF EF+YMILQ+YDF+ L 
Sbjct: 124 YDWLGNLDVISFLRDIGKNFGLNYMLAKDTVASRL--ETGISFTEFSYMILQSYDFLNLY 181

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKT-PKLFALTSPLLTTASGTKMGKTLSGAIWL 247
           ++++CRLQ+GGSDQWGNI  G++L  + +   K F LT PL+T + GTK GKT  GAIWL
Sbjct: 182 QHHNCRLQIGGSDQWGNITAGLELIRKSEEDAKAFGLTIPLVTKSDGTKFGKTEGGAIWL 241

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATE 305
           + E T+PY F+Q+W N DD DVV + K  T L   EI  + K   +  E   A+K + +E
Sbjct: 242 DPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLSHEEILELEKQVAEAPEKRAAQKALGSE 301

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTL 355
           +T +VHG E  E+A   +   F  S+            + +P++  + ++      L+ L
Sbjct: 302 MTKLVHGEEALEQAIKISAALFSGSVAELTANEIEQGFKDVPSVERTAEDTV----LIDL 357

Query: 356 IVKAGFATSTNEARRHLKSNAIKIN 380
           +V++  + S  +AR  + + AI +N
Sbjct: 358 LVESKISPSKRQAREDVTNGAIYVN 382


>gi|332670182|ref|YP_004453190.1| tyrosyl-tRNA synthetase [Cellulomonas fimi ATCC 484]
 gi|332339220|gb|AEE45803.1| tyrosyl-tRNA synthetase [Cellulomonas fimi ATCC 484]
          Length = 426

 Score =  271 bits (694), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 141/398 (35%), Positives = 226/398 (56%), Gaps = 12/398 (3%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L+ RG + Q ++P  L      G V+ Y G+D TA SLH G+L Q++ +  LQ  G
Sbjct: 4   ILDELAWRGLVAQTTDPDALRAALDAGQVSLYCGFDPTAPSLHIGNLVQILTVRRLQDAG 63

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN-IEKIKGIFSSFIKYGTGKTDALML 126
           H+P +L+GG T +IGDP    E  R + + ++    +++I+      +++  G + A M+
Sbjct: 64  HRPFALVGGATGLIGDPKMAGE--RTLNAPDVVAGWVDRIRRQIEPLLRF-DGPSAATMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   +  ID LR++G  F +  ML+ ++V  RL  +Q +SF EF+Y ILQ  D++E
Sbjct: 121 NNLDWTAPMSAIDFLRDVGKHFRLGTMLAKDTVARRLHSDQGISFTEFSYQILQGMDYLE 180

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + +   LQ GGSDQWGN++ G++L  +++   + ALT+PL+T A GTK GKT SG +W
Sbjct: 181 LHRRHGVTLQTGGSDQWGNLLSGVELVRKVEGTAVHALTTPLVTKADGTKFGKTESGTVW 240

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIAT 304
           L+ E+T+PY F+Q+W N DDADVVS+ K  T     EI+ +A+   Q     EA++ +A 
Sbjct: 241 LDPELTTPYAFYQFWLNADDADVVSYLKIFTFRTREEIEALAEAVEQRPAAREAQRALAH 300

Query: 305 EITTMVHGREEAEKAATAAMECFDM-SIHSQHMPTISISKDEVSRGMG-----LLTLIVK 358
           ++T++VHGR  A+K   A+   F   S+      T + +  E+    G     ++ ++  
Sbjct: 301 DVTSLVHGRTAADKVVEASQALFGRGSLADLDEATFAAAVAELPTAPGRAGDPVVDVLAA 360

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
           +G  TS   ARR +      +NN  +  E   ++ +D 
Sbjct: 361 SGIVTSKAAARRAIGEGGASVNNVRVEQEDAVLRPEDL 398


>gi|282890555|ref|ZP_06299078.1| hypothetical protein pah_c022o146 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281499552|gb|EFB41848.1| hypothetical protein pah_c022o146 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 430

 Score =  271 bits (694), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 148/424 (34%), Positives = 234/424 (55%), Gaps = 16/424 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + + IL ERGFI  +++    +I  +   +  Y G+D TA SLH G++  +M L W Q+ 
Sbjct: 3   NVIDILQERGFIEAMTSNNLKEITSTP--LKVYCGFDPTAESLHLGNMVAIMGLAWFQRC 60

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH PI+++GG T +IGDPS R + R ++    IQ+N+  I+    + +K+ +   + ++L
Sbjct: 61  GHTPIAIVGGATGMIGDPSGRSKERNILDDDSIQKNLYGIRKNIEAVLKHSSKDVELIIL 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W      +D LR++G +F V  ML+ +SV+ RL+ E+ LSF EF+Y +LQ YDF+ 
Sbjct: 121 NNYDWFKGFSLVDFLRDVGKYFRVGTMLAKDSVKIRLESEEGLSFTEFSYQLLQGYDFLH 180

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L  ++   L+MGGSDQWGNI  G DL  +++   +  LT PLLT + G K GK+  GAIW
Sbjct: 181 LYDHHGVTLEMGGSDQWGNITAGTDLVRKVRGKAVHGLTFPLLTRSDGKKFGKSEQGAIW 240

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKIIA 303
           L+ EM SPY F+QY   + DADV+   K LT + M EI   ++M        N A++ +A
Sbjct: 241 LSSEMLSPYEFYQYLFRVADADVIKLMKILTFMEMDEIRIYEKMMTQSDYVANTAQRKLA 300

Query: 304 TEITTMVHGREE-------AEKAATAAMECFDMSI---HSQHMPTISISKDEVSRGMGLL 353
            E+T +VHG E         E AA  A    D  +    +  MP  ++S + +     L+
Sbjct: 301 EEVTRIVHGEEGLRIALKVTEGAAPGAATALDAEVLNNLADDMPNYTVSMENI-LNRRLV 359

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            ++ +     S  + R+ +K+  + +NN  I  E   +  +       + ++FGKKN I+
Sbjct: 360 DVVSEITPERSKGDLRKLIKNGGVYLNNLRIEEENYILTPKALIDGNLMLIAFGKKNKIL 419

Query: 414 CHLC 417
             + 
Sbjct: 420 VRVS 423


>gi|34540106|ref|NP_904585.1| tyrosyl-tRNA synthetase [Porphyromonas gingivalis W83]
 gi|81417819|sp|Q7MXD8|SYY_PORGI RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|34396417|gb|AAQ65484.1| tyrosyl-tRNA synthetase [Porphyromonas gingivalis W83]
          Length = 430

 Score =  271 bits (694), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 153/427 (35%), Positives = 233/427 (54%), Gaps = 22/427 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG IH I    E  +  ++G+ +AY+G D TA SLH GHL  +M+L   Q+ 
Sbjct: 2   NFVEELRWRGMIHDIMPGTEEHL--NKGMTSAYVGIDPTADSLHIGHLVGVMMLRHFQRA 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL-M 125
           GH+PI+L+GG T +IGDPS +   R ++    ++ N + IK   + F+ + +   +A  +
Sbjct: 60  GHRPIALIGGATGMIGDPSMKSAERVLLDEATLRHNQDCIKQQLAKFLDFDSDAPNAAKL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQS--LSFLEFNYMILQAYD 183
           +NN  W+    ++  +R+IG   +VN M++ +SV+ RL  E S  LSF EF+Y +LQ YD
Sbjct: 120 VNNYDWMKDYSFLGFIRDIGKHITVNYMMAKDSVKKRLSAESSTGLSFTEFSYQLLQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           ++ L +N  CRLQMGGSDQWGNI  G +L  R    + FALT PL+T A G K GKT SG
Sbjct: 180 YLYLYRNEGCRLQMGGSDQWGNITTGTELIRRKDGGEAFALTCPLITKADGGKFGKTESG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINEAKKI 301
            IWL+   TSPY F+Q+W N+ DAD   + K  T L   EI  +A  Q +   +   +K 
Sbjct: 240 NIWLDPARTSPYAFYQFWLNVSDADAEKYIKIFTGLNQDEIAELASRQAEAPHLRPLQKR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQ--------------HMPTISISKDEVS 347
           +A EIT MVH RE  + A  A+   F  S   Q               +P   + +  ++
Sbjct: 300 LAEEITVMVHSREAYDAAVEASEILFGKSTTEQLRKLDEATLLDVFAGVPQYHVERSRIA 359

Query: 348 RGMGLLTLIVKA-GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+ L+ L+  A     S  E R+ +K+  + +N   +++ +  +   D  S   +    
Sbjct: 360 TGISLVDLLADATDIFPSKGELRKTVKAGGVSLNKEKVADAEQTVGEDDLLSDRYLLAQK 419

Query: 407 GKKNHII 413
           GKK++ +
Sbjct: 420 GKKSYYL 426


>gi|77361329|ref|YP_340904.1| tyrosyl-tRNA synthetase [Pseudoalteromonas haloplanktis TAC125]
 gi|97201824|sp|Q3II62|SYY1_PSEHT RecName: Full=Tyrosyl-tRNA synthetase 1; AltName:
           Full=Tyrosine--tRNA ligase 1; Short=TyrRS 1
 gi|76876240|emb|CAI87462.1| tyrosine tRNA synthetase [Pseudoalteromonas haloplanktis TAC125]
          Length = 420

 Score =  271 bits (694), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 146/402 (36%), Positives = 229/402 (56%), Gaps = 12/402 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +  L  ++ RG + Q+S+  +L+ L +   V  Y G+D TA SLH GHL  L++L     
Sbjct: 3   TQLLEDITHRGLVSQVSDLAQLEQLLATSQVV-YCGFDPTAGSLHIGHLVPLLMLKRFND 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHK ++L+GG T +IGDPSF+   R +   + +Q  +  +     S +     +   L 
Sbjct: 62  AGHKAVALIGGATGLIGDPSFKATERSLNSKETVQGWVADLSSQVESVMNPHLSEPIQLK 121

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDF 184
            NN  W   I+ +D  R++G  FS+N M++ ESV+ RL+R +Q LSF EF+Y +LQ+YDF
Sbjct: 122 -NNADWFSGIEVLDFFRDVGKHFSINNMINRESVKQRLQRPDQGLSFTEFSYTLLQSYDF 180

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
            +L     C +Q+GG+DQWGNI+ GIDL  RL    ++ LT PL+T + GTK GKT  GA
Sbjct: 181 AKLNSELGCSVQIGGNDQWGNIVSGIDLTRRLNKQTVYGLTLPLITKSDGTKFGKTEGGA 240

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA--KLQGKEINEAKKII 302
           IWL+ + TSPY F+Q+W N DDADV +F +  T L + EI+ +    +  ++  +A+ I+
Sbjct: 241 IWLDPKKTSPYRFYQFWLNCDDADVYNFLRFYTFLSVKEIEAIEANDITSQQKPQAQGIL 300

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI-SISKDEVS------RGMGLLTL 355
           A ++T  VHG +    A       F+  + +  +  +  + +D ++        + +  L
Sbjct: 301 AEQLTRFVHGEQGLASAQRITQLLFNGQVQTLTLAELEQLEQDGLAVHAISDAKINIAEL 360

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
           +VK+  A+S   AR  + +NAIKIN   I++E  Q+    FD
Sbjct: 361 LVKSELASSKRTARELINANAIKINGEAITDEHAQLDFPLFD 402


>gi|262167141|ref|ZP_06034855.1| tyrosyl-tRNA synthetase [Vibrio cholerae RC27]
 gi|262024441|gb|EEY43128.1| tyrosyl-tRNA synthetase [Vibrio cholerae RC27]
          Length = 426

 Score =  271 bits (694), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 160/422 (37%), Positives = 231/422 (54%), Gaps = 23/422 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG I Q S P E  +         Y G+D TA SLH GHL  L++L   Q  GH+ I
Sbjct: 10  LQQRGLIAQ-STPLEALVERFATPQVLYCGFDPTAGSLHIGHLVPLLMLKRFQNAGHQAI 68

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM-LNNET 130
           +L+GG T +IGDPSF+   R +  +Q +Q+ +  +    +  +   +    +LM +NN  
Sbjct: 69  ALIGGATGMIGDPSFKANERVLNSAQTVQQWVSDLSQQITQLMVSQSENCASLMTVNNAD 128

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDFVELAK 189
           W+  I  ID  R++G  FSVN M++ ESV+ RL R +Q +SF EF+Y +LQ+YDF  L +
Sbjct: 129 WIGKINLIDFFRDVGKHFSVNTMINRESVKQRLARPDQGISFTEFSYSLLQSYDFAHLNR 188

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
            + C LQ+GG+DQWGNI+ GIDL  RL   ++  LT PL+T + GTK GKT SGA+WL  
Sbjct: 189 EFGCALQIGGNDQWGNIVSGIDLTRRLNGAEVCGLTLPLITKSDGTKFGKTESGAVWLES 248

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEIT 307
             TSPY F+Q+W N DDADV  F    T L  +EI+  R A        +A++I+A  +T
Sbjct: 249 SKTSPYRFYQFWLNSDDADVYRFLAYYTFLSTAEIEEIRQADALRAGKPQAQQILAEHVT 308

Query: 308 TMVHGRE--EAEKAATAAMECFDMSIHS---------QHMPTISISKDEVSRGMGLLTLI 356
             VHG E   A +  T A+   D+S  S           +P ++ S+ +      LL  +
Sbjct: 309 RFVHGEEGLAAAQRITQALFSGDVSYLSLSELAQLELDGLPCVAASRSD-----SLLDFL 363

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           + +G A+S  +AR  L++ AI++N   +  E +      FD      L  GKK   +  L
Sbjct: 364 LSSGLASSKRQAREWLENGAIRVNGERVQQEGVLSGFALFDRY--YVLQRGKKQFALIKL 421

Query: 417 CG 418
            G
Sbjct: 422 EG 423


>gi|253734487|ref|ZP_04868652.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           TCH130]
 gi|253727541|gb|EES96270.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           TCH130]
          Length = 420

 Score =  271 bits (694), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 146/382 (38%), Positives = 220/382 (57%), Gaps = 20/382 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I+Q ++ + ++ L ++  VT Y G D TA SLH GHL   + L   Q+ GH+PI
Sbjct: 9   LKWRGLIYQQTDEQGIEDLLNKEQVTLYCGADPTADSLHIGHLLPFLTLRRFQEHGHRPI 68

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+GGGT +IGDPS + E R +   +++ +NIE I     +  ++GT    A+++NN  W
Sbjct: 69  VLIGGGTGMIGDPSGKSEERVLQTEEQVDKNIEGISKQMHNIFEFGTDHG-AVLVNNRDW 127

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L  I  I  LR+ G    VN ML  +S++SRL  E  +S+ EF Y ILQA DF  L +  
Sbjct: 128 LGQISLISFLRDYGKHVGVNYMLGKDSIQSRL--EHGISYTEFTYTILQAIDFGHLNREL 185

Query: 192 DCRLQMGGSDQWGNIICGIDLGERL-KTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKE 250
           +C++Q+GGSDQWGNI  GI+L  R+      + LT PL+T + G K GK+ SGA+WL+ E
Sbjct: 186 NCKIQVGGSDQWGNITSGIELMRRMYGQTDAYGLTIPLVTKSDGKKFGKSESGAVWLDAE 245

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKKIIATEITT 308
            TSPY F+Q+W N  D DV+ F K  T L   EIDR+  +K +   + EA+K +A E+T 
Sbjct: 246 KTSPYEFYQFWINQSDEDVIKFLKYFTFLGKEEIDRLEQSKNEAPHLREAQKTLAEEVTK 305

Query: 309 MVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIVK 358
            +HG +    A   +   F   + S          + +P +++S D  +    ++ ++++
Sbjct: 306 FIHGEDALNDAIRISQALFSGDLKSLSAKELKDGFKDVPQVTLSNDTTN----IVEVLIE 361

Query: 359 AGFATSTNEARRHLKSNAIKIN 380
            G +TS  +AR  + + AI IN
Sbjct: 362 TGISTSKRQAREDVNNGAIYIN 383


>gi|228941839|ref|ZP_04104386.1| Tyrosyl-tRNA synthetase 1 [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|228974764|ref|ZP_04135330.1| Tyrosyl-tRNA synthetase 1 [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228981359|ref|ZP_04141659.1| Tyrosyl-tRNA synthetase 1 [Bacillus thuringiensis Bt407]
 gi|229163655|ref|ZP_04291603.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus R309803]
 gi|228619792|gb|EEK76670.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus R309803]
 gi|228778559|gb|EEM26826.1| Tyrosyl-tRNA synthetase 1 [Bacillus thuringiensis Bt407]
 gi|228785167|gb|EEM33180.1| Tyrosyl-tRNA synthetase 1 [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228818051|gb|EEM64129.1| Tyrosyl-tRNA synthetase 1 [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|326942444|gb|AEA18340.1| tyrosyl-tRNA synthetase [Bacillus thuringiensis serovar chinensis
           CT-43]
          Length = 418

 Score =  271 bits (694), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 149/385 (38%), Positives = 223/385 (57%), Gaps = 19/385 (4%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L  L  RG I+Q ++   L+ L  +  V  Y G+D TA SLH GH+  +++L   Q  GH
Sbjct: 4   LQDLEFRGLINQQTDAEGLEQLLEKESVKLYCGFDPTADSLHIGHMLPVLMLRRFQLAGH 63

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           +PI+L+GGGT +IGDPS +   R +     +    E IK   S+F+++      A M NN
Sbjct: 64  QPIALVGGGTGMIGDPSGKKAERTLNTKDTVAYYTESIKNQLSNFLEFENVDNPATMANN 123

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL ++  I  LR+IG  F +N ML+ ++V SRL  E  +SF EF+YMILQ+YDF+ L 
Sbjct: 124 YDWLGNLDVISFLRDIGKNFGLNYMLAKDTVASRL--ETGISFTEFSYMILQSYDFLNLY 181

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKT-PKLFALTSPLLTTASGTKMGKTLSGAIWL 247
           ++++CRLQ+GGSDQWGNI  G++L  + +   K F LT PL+T + GTK GKT  GAIWL
Sbjct: 182 QHHNCRLQIGGSDQWGNITAGLELIRKSEEDAKAFGLTIPLVTKSDGTKFGKTEGGAIWL 241

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATE 305
           + E T+PY F+Q+W N DD DVV + K  T L   EI  + K   +  E   A+K + +E
Sbjct: 242 DPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLSHEEILELEKQVAEAPEKRAAQKALGSE 301

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTL 355
           +T +VHG E  E+A   +   F  S+            + +P++  + ++      L+ L
Sbjct: 302 MTKLVHGEEALEQAIKISAALFSGSVAELTASEIEQGFKDVPSVERTAEDTV----LIDL 357

Query: 356 IVKAGFATSTNEARRHLKSNAIKIN 380
           +V++  + S  +AR  + + AI +N
Sbjct: 358 LVESKISPSKRQAREDVTNGAIYVN 382


>gi|196040849|ref|ZP_03108147.1| tyrosine--tRNA ligase [Bacillus cereus NVH0597-99]
 gi|217962146|ref|YP_002340716.1| tyrosyl-tRNA synthetase [Bacillus cereus AH187]
 gi|229141395|ref|ZP_04269933.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus BDRD-ST26]
 gi|229158266|ref|ZP_04286333.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus ATCC 4342]
 gi|300118900|ref|ZP_07056613.1| tyrosyl-tRNA synthetase [Bacillus cereus SJ1]
 gi|196028303|gb|EDX66912.1| tyrosine--tRNA ligase [Bacillus cereus NVH0597-99]
 gi|217064110|gb|ACJ78360.1| tyrosyl-tRNA synthetase [Bacillus cereus AH187]
 gi|228625224|gb|EEK81984.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus ATCC 4342]
 gi|228642176|gb|EEK98469.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus BDRD-ST26]
 gi|298723745|gb|EFI64474.1| tyrosyl-tRNA synthetase [Bacillus cereus SJ1]
 gi|324328556|gb|ADY23816.1| tyrosyl-tRNA synthetase [Bacillus thuringiensis serovar finitimus
           YBT-020]
          Length = 418

 Score =  271 bits (694), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 149/385 (38%), Positives = 222/385 (57%), Gaps = 19/385 (4%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L  L  RG I+Q ++   L+ L  +  V  Y G+D TA SLH GH+  +++L   Q  GH
Sbjct: 4   LQDLEFRGLINQQTDAEGLEQLLEKESVKLYCGFDPTADSLHIGHMLPVLMLRRFQLAGH 63

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           +PI+L+GGGT +IGDPS +   R +     +    E IK   S+F+++      A M NN
Sbjct: 64  QPIALVGGGTGMIGDPSGKKAERTLNTKDTVAYYTESIKNQLSNFLEFENVDNPATMANN 123

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL ++  I  LR+IG  F +N ML+ ++V SRL  E  +SF EF+YMILQ+YDF+ L 
Sbjct: 124 YDWLGNLDVISFLRDIGKNFGLNYMLAKDTVASRL--ETGISFTEFSYMILQSYDFLNLY 181

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKT-PKLFALTSPLLTTASGTKMGKTLSGAIWL 247
           ++++CRLQ+GGSDQWGNI  G++L  + +   K F LT PL+T + GTK GKT  GAIWL
Sbjct: 182 QHHNCRLQIGGSDQWGNITAGLELIRKSEEDAKAFGLTIPLVTKSDGTKFGKTEGGAIWL 241

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATE 305
           + E T+PY F+Q+W N DD DVV + K  T L   EI  + K   +  E   A+K +  E
Sbjct: 242 DPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLSHEEILELEKQVAEAPEKRAAQKALGAE 301

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTL 355
           +T +VHG E  E+A   +   F  S+            + +P++  + ++      L+ L
Sbjct: 302 MTKLVHGEEALEQAIKISAALFSGSVAELTASEIEQGFKDVPSVERTAEDTV----LIDL 357

Query: 356 IVKAGFATSTNEARRHLKSNAIKIN 380
           +V++  + S  +AR  + + AI +N
Sbjct: 358 LVESKISPSKRQAREDVTNGAIYVN 382


>gi|324994406|gb|EGC26320.1| tyrosine--tRNA ligase [Streptococcus sanguinis SK678]
          Length = 419

 Score =  271 bits (694), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 141/384 (36%), Positives = 219/384 (57%), Gaps = 11/384 (2%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L ERG + Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  GHKP 
Sbjct: 8   LKERGLVFQTTDEAALRKALEEGQVSYYSGYDPTADSLHLGHLVAILTSRRLQLAGHKPY 67

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+D  R +   + ++   + I+   S F+ +  G   A M+NN  W
Sbjct: 68  ALVGGATGLIGDPSFKDAERSLQTKETVEGWAKSIQDQLSRFLDFEKGDNKAEMVNNYDW 127

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
             SI +ID LR++G +F+VN M+S +SV+SR+  E  +S+ EF Y I+Q YDF  L +N+
Sbjct: 128 FSSISFIDFLRDVGKYFTVNYMMSKDSVKSRI--ETGISYTEFAYQIMQGYDFYVLNQNH 185

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
              LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WLN + 
Sbjct: 186 GVTLQIGGSDQWGNMTAGTELLRRKADKIGHVMTVPLITDATGKKFGKSEGNAVWLNPDK 245

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATEITTM 309
           TSPY  +Q+W N+ DAD + F K  T L + EI+ + +      +E  A+K++A E+ ++
Sbjct: 246 TSPYEMYQFWMNVMDADAIRFLKIFTFLSLDEIEEIRQQFEAAPHERLAQKVLAREVVSL 305

Query: 310 VHGREEAEKAATAAMECFDMSIHS-------QHMPTISISKDEVSRGMGLLTLIVKAGFA 362
           VHG+E  ++A     + F  +I +       Q +  +   + +    + ++ L+V AG  
Sbjct: 306 VHGQEAYQEALNITEQLFAGNIKNLSIKELKQGLRGVPNYQVQAEDNLNIVELLVIAGVV 365

Query: 363 TSTNEARRHLKSNAIKINNSIISN 386
            S  +AR  +++ AI +N   I +
Sbjct: 366 NSKRQAREDVQNGAIYLNGERIQD 389


>gi|91216088|ref|ZP_01253056.1| tyrosyl-tRNA synthetase [Psychroflexus torquis ATCC 700755]
 gi|91185605|gb|EAS71980.1| tyrosyl-tRNA synthetase [Psychroflexus torquis ATCC 700755]
          Length = 431

 Score =  271 bits (694), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 149/400 (37%), Positives = 224/400 (56%), Gaps = 22/400 (5%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           K+DF+  ++ RG IH +  P   D L ++    AY+G D TA SLH GHL  +M+L   Q
Sbjct: 2   KNDFIEEVTWRGMIHDVM-PGTQDHL-NESPRAAYVGIDPTADSLHIGHLVSVMMLRHFQ 59

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD-A 123
             GHKP++L+GG T +IGDPS + + R ++    ++ N   +K   S F+++   + + A
Sbjct: 60  LAGHKPVALVGGATGMIGDPSGKSQERNLLDEATLRHNQNALKAQLSKFLEFDAKEDNSA 119

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQA 181
           +++NN  W+    ++D +R++G   +VN M+S ESV+ RL  E  + +SF EF Y ++Q 
Sbjct: 120 ILVNNYDWMKDFSFLDFIRDVGKHITVNYMMSKESVKKRLSSESKEGMSFTEFTYQLVQG 179

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
           YDF+ L +   C LQMGGSDQWGNI  G +L  R+   K FALT PL+T A GTK GKT 
Sbjct: 180 YDFLHLYRTQKCTLQMGGSDQWGNITTGTELIRRIDQGKGFALTCPLITKADGTKFGKTA 239

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE--INEAK 299
           +G IWL+ + TSPY F+QYW N  D D   F K  T L   EI  +     ++  + + +
Sbjct: 240 TGNIWLDPKKTSPYKFYQYWINTSDEDAEIFIKIFTFLSQKEISDLVNTHKEQPHLRQLQ 299

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDE 345
             +A EIT  VH ++  +KA  A+   F  S                 + +P   +SK+ 
Sbjct: 300 SRLADEITAAVHSKKGLDKAKEASQVLFGKSTEEDLAKLDEATFLDVFEGVPLKELSKEI 359

Query: 346 VSRGMGLL-TLIVKAGFATSTNEARRHLKSNAIKINNSII 384
           ++    ++  L  +  F +S  EARR LK N+I +N S +
Sbjct: 360 LNDNFDMIAALSAETEFLSSNGEARRALKENSISVNKSKV 399


>gi|262403909|ref|ZP_06080466.1| tyrosyl-tRNA synthetase [Vibrio sp. RC586]
 gi|262349871|gb|EEY99007.1| tyrosyl-tRNA synthetase [Vibrio sp. RC586]
          Length = 426

 Score =  271 bits (694), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 160/422 (37%), Positives = 232/422 (54%), Gaps = 23/422 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG I Q S P E  +         Y G+D TA SLH GHL  L++L   Q  GH+ I
Sbjct: 10  LQQRGLIAQ-STPLEALVERFTTPQVLYCGFDPTAGSLHIGHLVPLLMLKRFQNAGHQAI 68

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM-LNNET 130
           +L+GG T +IGDPSF+   R +  +Q +Q+ +  +    +  +   +     L+ +NN  
Sbjct: 69  ALIGGATGMIGDPSFKANERVLNSAQTVQQWVSDLSQQITQLMTSQSENLAPLITVNNAD 128

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDFVELAK 189
           W+  I  ID  R++G  FSVN M++ ESV+ RL R +Q +SF EF+Y +LQ+YDF  L +
Sbjct: 129 WIGKINLIDFFRDVGKHFSVNTMINRESVKQRLARPDQGISFTEFSYSLLQSYDFAHLNR 188

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
            + C LQ+GG+DQWGNI+ GIDL  RL   ++  LT PL+T + GTK GKT SGA+WL  
Sbjct: 189 EFGCALQIGGNDQWGNIVSGIDLTRRLNGVEVCGLTLPLITKSDGTKFGKTESGAVWLES 248

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEIT 307
             TSPY F+Q+W N DDADV  F    T L  +EI+  R A        +A++I+A ++T
Sbjct: 249 SKTSPYRFYQFWLNSDDADVYRFLAYYTFLSSAEIEGIRQADALRTGKPQAQQILAEQVT 308

Query: 308 TMVHGRE--EAEKAATAAMECFDMSIHS---------QHMPTISISKDEVSRGMGLLTLI 356
             VHG E   A +  T A+   D+S  S           +P ++ S+ +      LL L+
Sbjct: 309 RFVHGEEGLAAAQRITQALFSGDVSYLSLSELSQLELDGLPCVAASRSDT-----LLDLL 363

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           + +G A+S  +AR  L++ AI++N   +  E +      FD      L  GKK   +  L
Sbjct: 364 ITSGLASSKRQAREWLENGAIRVNGERVQQEGVLSGFALFDRY--YVLQRGKKQFALIKL 421

Query: 417 CG 418
            G
Sbjct: 422 DG 423


>gi|47565074|ref|ZP_00236117.1| tyrosyl-tRNA synthetase [Bacillus cereus G9241]
 gi|47557860|gb|EAL16185.1| tyrosyl-tRNA synthetase [Bacillus cereus G9241]
          Length = 418

 Score =  271 bits (694), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 149/385 (38%), Positives = 222/385 (57%), Gaps = 19/385 (4%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L  L  RG I+Q ++   L+ L  +  V  Y G+D TA SLH GH+  +++L   Q  GH
Sbjct: 4   LQDLEFRGLINQQTDAEGLEQLLEKESVKLYCGFDPTADSLHIGHMLPVLMLRRFQLAGH 63

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           +PI+L+GGGT +IGDPS +   R +     +    E IK   S+F+++      A M NN
Sbjct: 64  QPIALVGGGTGMIGDPSGKKAERTLNTKDTVAYYTESIKNQLSNFLEFENVDNPATMANN 123

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL ++  I  LR+IG  F +N ML+ ++V SRL  E  +SF EF+YMILQ+YDF+ L 
Sbjct: 124 YDWLGNLDVISFLRDIGKNFGLNYMLAKDTVASRL--ETGISFTEFSYMILQSYDFLNLY 181

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKT-PKLFALTSPLLTTASGTKMGKTLSGAIWL 247
           ++++CRLQ+GGSDQWGNI  G++L  + +   K F LT PL+T + GTK GKT  GAIWL
Sbjct: 182 QHHNCRLQIGGSDQWGNITAGLELIRKSEEDAKAFGLTIPLVTKSDGTKFGKTEGGAIWL 241

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATE 305
           + E T+PY F+Q+W N DD DVV + K  T L   EI  + K   +  E   A+K +  E
Sbjct: 242 DPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLSHEEILELEKQVAEAPEKRAAQKALGAE 301

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTL 355
           +T +VHG E  E+A   +   F  S+            + +P++  + ++      L+ L
Sbjct: 302 MTKLVHGEEALEQAIKISAALFSGSVAELTASEIEQGFKDVPSVERAAEDTV----LIDL 357

Query: 356 IVKAGFATSTNEARRHLKSNAIKIN 380
           +V++  + S  +AR  + + AI +N
Sbjct: 358 LVESKISPSKRQAREDVTNGAIYVN 382


>gi|329962748|ref|ZP_08300671.1| tyrosine--tRNA ligase [Bacteroides fluxus YIT 12057]
 gi|328529582|gb|EGF56485.1| tyrosine--tRNA ligase [Bacteroides fluxus YIT 12057]
          Length = 430

 Score =  271 bits (694), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 152/427 (35%), Positives = 228/427 (53%), Gaps = 22/427 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG +H +    E   L ++  VTAYIG+D TA SLH GHL  +M+L   Q+ 
Sbjct: 2   NFVEELRWRGMLHDMMPGTEE--LLAKEQVTAYIGFDPTADSLHIGHLCSVMILRHFQRC 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD-ALM 125
           GHKP++L+GG T +IGDPS +   R ++  + +Q N+  +K   S F+ + +   + A +
Sbjct: 60  GHKPLALIGGATGMIGDPSGKSAERNLLTEETLQRNMAGMKAQLSKFLDFDSDAPNRAEL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQAYD 183
           +NN  W+    ++D  RE+G   +VN M++ +SV+ RL  E    LSF EF Y +LQ YD
Sbjct: 120 VNNYDWMKDFSFLDFAREVGKHITVNYMMAKDSVKKRLNGEARDGLSFTEFTYQLLQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ L +   CRLQMGGSDQWGNI  G +L  R    ++FALTSPL+T A G K GKT SG
Sbjct: 180 FLHLYETKGCRLQMGGSDQWGNITTGAELIRRTNGGEVFALTSPLITKADGGKFGKTESG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKKI 301
            IWL+   TSPY F+Q+W N+ DAD   + K  T L   E+D +         +   +K 
Sbjct: 240 NIWLDPRYTSPYKFYQFWLNVSDADASRYIKIFTALTKEEVDALIAEHEAAPHLRVLQKR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDEVS 347
           +A E+T MVH  E+   A  A+   F  +                 + +P   IS+D ++
Sbjct: 300 LAKEVTIMVHSEEDYNAAVDASNILFGNATSDALKKLDEDTLLAVFEGVPQFEISRDALA 359

Query: 348 RGMGLLTLIV-KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+  + L V  A    S  E R+ ++   + +N   ++     +   D      + +  
Sbjct: 360 AGVKAVDLFVDNAAVFASKGEMRKLVQGGGVSLNKEKLAAFDQVVTTADLLDDKYLLVQR 419

Query: 407 GKKNHII 413
           GKKN+ +
Sbjct: 420 GKKNYYL 426


>gi|121728594|ref|ZP_01681615.1| tyrosyl-tRNA synthetase [Vibrio cholerae V52]
 gi|147673691|ref|YP_001215991.1| tyrosyl-tRNA synthetase [Vibrio cholerae O395]
 gi|121629150|gb|EAX61593.1| tyrosyl-tRNA synthetase [Vibrio cholerae V52]
 gi|146315574|gb|ABQ20113.1| tyrosyl-tRNA synthetase [Vibrio cholerae O395]
 gi|227012318|gb|ACP08528.1| tyrosyl-tRNA synthetase [Vibrio cholerae O395]
          Length = 434

 Score =  271 bits (693), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 160/422 (37%), Positives = 231/422 (54%), Gaps = 23/422 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG I Q S P E  +         Y G+D TA SLH GHL  L++L   Q  GH+ I
Sbjct: 18  LQQRGLIAQ-STPLEALVERFATPQVLYCGFDPTAGSLHIGHLVPLLMLKRFQNAGHQAI 76

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM-LNNET 130
           +L+GG T +IGDPSF+   R +  +Q +Q+ +  +    +  +   +    +LM +NN  
Sbjct: 77  ALIGGATGMIGDPSFKANERVLNSAQTVQQWVSDLSQQITQLMVSQSENCASLMTVNNAD 136

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDFVELAK 189
           W+  I  ID  R++G  FSVN M++ ESV+ RL R +Q +SF EF+Y +LQ+YDF  L +
Sbjct: 137 WIGKINLIDFFRDVGKHFSVNTMINRESVKQRLARPDQGISFTEFSYSLLQSYDFAHLNR 196

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
            + C LQ+GG+DQWGNI+ GIDL  RL   ++  LT PL+T + GTK GKT SGA+WL  
Sbjct: 197 EFGCALQIGGNDQWGNIVSGIDLTRRLNGAEVCGLTLPLITKSDGTKFGKTESGAVWLES 256

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEIT 307
             TSPY F+Q+W N DDADV  F    T L  +EI+  R A        +A++I+A  +T
Sbjct: 257 SKTSPYRFYQFWLNSDDADVYRFLAYYTFLSTAEIEEIRQADALRAGKPQAQQILAEHVT 316

Query: 308 TMVHGRE--EAEKAATAAMECFDMSIHS---------QHMPTISISKDEVSRGMGLLTLI 356
             VHG E   A +  T A+   D+S  S           +P ++ S+ +      LL  +
Sbjct: 317 RFVHGEEGLAAAQRITQALFSGDVSYLSLSELAQLELDGLPCVAASRSD-----SLLDFL 371

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           + +G A+S  +AR  L++ AI++N   +  E +      FD      L  GKK   +  L
Sbjct: 372 LSSGLASSKRQAREWLENGAIRVNGERVQQEGVLSGFALFDRY--YVLQRGKKQFALIKL 429

Query: 417 CG 418
            G
Sbjct: 430 EG 431


>gi|229081915|ref|ZP_04214407.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus Rock4-2]
 gi|229192885|ref|ZP_04319843.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus ATCC 10876]
 gi|228590724|gb|EEK48585.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus ATCC 10876]
 gi|228701503|gb|EEL53997.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus Rock4-2]
          Length = 418

 Score =  271 bits (693), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 149/385 (38%), Positives = 222/385 (57%), Gaps = 19/385 (4%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L  L  RG I+Q ++   L+ L  +  V  Y G+D TA SLH GH+  +++L   Q  GH
Sbjct: 4   LQDLEFRGLINQQTDAEGLEQLLEKESVKLYCGFDPTADSLHIGHMLPVLMLRRFQLAGH 63

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           +PI+L+GGGT +IGDPS +   R +     +    E IK   S+F+++      A M NN
Sbjct: 64  QPIALVGGGTGMIGDPSGKKAERTLNTKDTVAYYTESIKNQLSNFLEFENVDNPATMANN 123

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL ++  I  LR+IG  F +N ML+ ++V SRL  E  +SF EF+YMILQ+YDF+ L 
Sbjct: 124 YDWLGNLDVISFLRDIGKNFGLNYMLAKDTVASRL--ETGISFTEFSYMILQSYDFLNLY 181

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKT-PKLFALTSPLLTTASGTKMGKTLSGAIWL 247
           + ++CRLQ+GGSDQWGNI  G++L  + +   K F LT PL+T + GTK GKT  GAIWL
Sbjct: 182 QQHNCRLQIGGSDQWGNITAGLELIRKSEEDAKAFGLTIPLVTKSDGTKFGKTEGGAIWL 241

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATE 305
           + E T+PY F+Q+W N DD DVV + K  T L   EI  + K   +  E   A+K + +E
Sbjct: 242 DPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLSHEEILELEKQVAEAPEKRAAQKALGSE 301

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTL 355
           +T +VHG E  E+A   +   F  S+            + +P++  + ++      L+ L
Sbjct: 302 MTKLVHGEEALEQAIKISAALFSGSVAELTASEIEQGFKDVPSVERTAEDTV----LIDL 357

Query: 356 IVKAGFATSTNEARRHLKSNAIKIN 380
           +V++  + S  +AR  + + AI +N
Sbjct: 358 LVESKISPSKRQAREDVTNGAIYVN 382


>gi|299535427|ref|ZP_07048749.1| tyrosyl-tRNA synthetase [Lysinibacillus fusiformis ZC1]
 gi|298729188|gb|EFI69741.1| tyrosyl-tRNA synthetase [Lysinibacillus fusiformis ZC1]
          Length = 422

 Score =  271 bits (693), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 147/423 (34%), Positives = 248/423 (58%), Gaps = 21/423 (4%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           ++ L  L  RG ++Q ++   +  L ++  V+ Y G D TA S+H GH+  L+ L   QK
Sbjct: 3   NELLQDLEWRGLLYQQTDAEGMAKLLNEQSVSLYCGVDPTADSMHIGHIVPLLTLRRFQK 62

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+PI L+GG T +IGDPS R E R++   ++I +N++ I+       ++      A +
Sbjct: 63  AGHRPILLVGGATGMIGDPSGRSEERQLQTVEQIDKNVQGIRSQLERIFEFAEDGNGAQL 122

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  W+ +I  I+ LR+ G   +VN ML+ +++ SRL  +  +SF EF Y ++Q  D+ 
Sbjct: 123 VNNRDWIGNINTIEFLRDYGKLINVNYMLAKDTIASRL--DTGISFTEFAYTLIQGIDYN 180

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERL--KTPKLFALTSPLLTTASGTKMGKTLSG 243
            L  +Y+CR+Q+GGSDQWGNI  G+++  +   +  K F +T PL+T A GTK GKT  G
Sbjct: 181 HLYNHYNCRIQVGGSDQWGNITTGLEVIRKTHEEETKAFGITIPLVTKADGTKFGKTAGG 240

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE--INEAKKI 301
           A+WL+ + TSPY F+Q+W N  DADV+ + K  T L   EI+ +A    +E  + +A+K 
Sbjct: 241 AVWLDSKKTSPYEFYQFWINAADADVIKYLKIFTFLSREEIEALAVSVEEEPHLRKAQKA 300

Query: 302 IATEITTMVHGREEAEKA--ATAAMECFDMSIHS--------QHMPTISISKDEVSRGMG 351
           +A E+T ++HG+E  E+A   TAA+   D+   S        + +P+I ++KD+ +    
Sbjct: 301 LAEEMTRLIHGQEALEQAIRITAALFSGDLKALSAEEMKDAFKDVPSIEMAKDDKN---- 356

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD-FDSTGNIKLSFGKKN 410
           ++ L+V+AG ++S  +AR  + + AI +N   +++ +  +  +D  +   +I     KK 
Sbjct: 357 IVDLLVEAGISSSKRQAREDVSNGAISVNGEKVTDLEYVVDAKDRLEDAFSIVRRGKKKY 416

Query: 411 HII 413
           H++
Sbjct: 417 HMV 419


>gi|188994224|ref|YP_001928476.1| tyrosyl-tRNA synthetase [Porphyromonas gingivalis ATCC 33277]
 gi|254783624|sp|B2RHN4|SYY_PORG3 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|188593904|dbj|BAG32879.1| tyrosyl-tRNA synthetase [Porphyromonas gingivalis ATCC 33277]
          Length = 430

 Score =  271 bits (693), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 153/427 (35%), Positives = 233/427 (54%), Gaps = 22/427 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG IH I    E  +  ++G+ +AY+G D TA SLH GHL  +M+L   Q+ 
Sbjct: 2   NFVEELRWRGMIHDIMPGTEEHL--NKGMTSAYVGIDPTADSLHIGHLVGVMMLRHFQRA 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL-M 125
           GH+PI+L+GG T +IGDPS +   R ++    ++ N + IK   + F+ + +   +A  +
Sbjct: 60  GHRPIALIGGATGMIGDPSMKSAERVLLDEATLRHNQDCIKQQLAKFLDFDSDAPNAAKL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQS--LSFLEFNYMILQAYD 183
           +NN  W+    ++  +R+IG   +VN M++ +SV+ RL  E S  LSF EF+Y +LQ YD
Sbjct: 120 VNNYDWMKDYSFLGFIRDIGKHITVNYMMAKDSVKKRLSAESSTGLSFTEFSYQLLQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           ++ L +N  CRLQMGGSDQWGNI  G +L  R    + FALT PL+T A G K GKT SG
Sbjct: 180 YLYLYRNEGCRLQMGGSDQWGNITTGTELIRRKDGGEAFALTCPLITKADGGKFGKTESG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINEAKKI 301
            IWL+   TSPY F+Q+W N+ DAD   + K  T L   EI  +A  Q +   +   +K 
Sbjct: 240 NIWLDPARTSPYAFYQFWLNVSDADAEKYIKIFTGLNQDEIAELATRQAEAPHLRPLQKR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQ--------------HMPTISISKDEVS 347
           +A EIT MVH RE  + A  A+   F  S   Q               +P   + +  ++
Sbjct: 300 LAEEITVMVHSREAYDAAVEASEILFGKSTTEQLRKLDEATLLDVFAGVPQYHVERSRIA 359

Query: 348 RGMGLLTLIVKA-GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+ L+ L+  A     S  E R+ +K+  + +N   +++ +  +   D  S   +    
Sbjct: 360 TGISLVDLLADATDIFPSKGELRKTVKAGGVSLNKEKVADAEQTVGEDDLLSDRYLLAQK 419

Query: 407 GKKNHII 413
           GKK++ +
Sbjct: 420 GKKSYYL 426


>gi|291458844|ref|ZP_06598234.1| tyrosine--tRNA ligase [Oribacterium sp. oral taxon 078 str. F0262]
 gi|291418098|gb|EFE91817.1| tyrosine--tRNA ligase [Oribacterium sp. oral taxon 078 str. F0262]
          Length = 336

 Score =  271 bits (693), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 143/320 (44%), Positives = 198/320 (61%), Gaps = 8/320 (2%)

Query: 80  IIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYID 139
           +IGDPS R + RRMM   EI  N E+I+   S FI +G GK  A+M NN  WL ++ ++D
Sbjct: 1   MIGDPSGRTDMRRMMSVSEIDHNCERIREQMSRFIDFGEGK--AVMANNADWLRNLNFMD 58

Query: 140 LLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGG 199
            +RE+G  FSVN ML      +RL  EQ LSFLEF YM +Q YDF  L + Y C +Q GG
Sbjct: 59  FMREVGPNFSVNEMLRARCYVNRL--EQGLSFLEFCYMPMQGYDFYMLFQKYGCNMQFGG 116

Query: 200 SDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQ 259
            DQW N++ G +L  +       A+T  LLT   G KMGKT++GA+WL+ E TSPY F+Q
Sbjct: 117 DDQWSNMLAGTELIRKKLGEDAHAMTITLLTNKEGKKMGKTVNGAVWLDPEKTSPYEFYQ 176

Query: 260 YWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKA 319
           YWRN+DDADV+   K LT LP+ EI +M   +G E+N AK+I+A ++T +VHG EEA+KA
Sbjct: 177 YWRNVDDADVIKCLKLLTFLPLEEIRKMESFEGAELNRAKEILAFQLTELVHGEEEAKKA 236

Query: 320 ATAAMECFDMSIHSQHMPTISISKDEVSRGMG---LLTLIVKAGFATSTNEARRHLKSNA 376
            +AA E F     S++MPT+S+ KD   R  G   +L ++V +   +S  EARR++    
Sbjct: 237 ESAARELFSGGGSSENMPTVSL-KDTDFREDGTIDILAVLVLSKLCSSRAEARRNVVQGG 295

Query: 377 IKINNSIISNEKLQIKLQDF 396
           +  +   I +     + +DF
Sbjct: 296 VSQDGERIEDIGRSYRREDF 315


>gi|227501840|ref|ZP_03931889.1| tyrosyl-tRNA synthetase [Corynebacterium accolens ATCC 49725]
 gi|227077865|gb|EEI15828.1| tyrosyl-tRNA synthetase [Corynebacterium accolens ATCC 49725]
          Length = 428

 Score =  271 bits (693), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 154/396 (38%), Positives = 230/396 (58%), Gaps = 21/396 (5%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           ++ +  L  RG I+Q ++   L    ++  ++ Y G+D T SSLHAGHL  L++L   Q+
Sbjct: 5   TNIIDELQWRGLINQSTDLEALK-EAAESPISLYCGFDPTGSSLHAGHLVPLIMLKRFQR 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQE-IQENIEKIKGIFSSFIKY---GTGKT 121
            GH+PI+L GG T +IGDP  RD   R M S+E I EN++ IK    +F+ +   G    
Sbjct: 64  FGHRPIALAGGATGMIGDP--RDVGERSMLSEEQIAENMQAIKDQLEAFVDFTEAGESAI 121

Query: 122 DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA 181
            A+M+NN  W   I  I+ LR+IG  FS+N ML  ++V+ RL+ +  +S+ EF+YM+LQA
Sbjct: 122 PAVMVNNADWTSQINVIEYLRDIGKNFSLNTMLDRDTVKRRLESD-GISYTEFSYMLLQA 180

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            DFV L K YDC LQ+GG DQWGNI+ G+DL  R+   K+  LT PL+T A G K GK+ 
Sbjct: 181 NDFVHLHKEYDCVLQIGGGDQWGNIVSGVDLNRRVNGAKVHGLTVPLVTDAEGNKFGKST 240

Query: 242 SGA-IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN--EA 298
            G  +WL+ ++TSPY+++QY+ N  DA V+ + +  T L   EI  +A+   +E +  EA
Sbjct: 241 GGGKLWLDPQLTSPYSWYQYFINAGDAVVIDYLRWFTFLTQEEIAELARKVEEEPHKREA 300

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECF--------DMSIHSQHMPTISISKDEVSRGM 350
           ++++A E+TT+VHG +  E    A+   F        D +  S  +    I+  EV    
Sbjct: 301 QRVLAREMTTLVHGEQATEAVELASQALFGKAELQDLDEATLSSALQETEIA--EVGPEA 358

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISN 386
            +L L+V+AG   S   ARR +      +NN  I +
Sbjct: 359 TILDLLVEAGLEKSKGAARRTVGEGGAYVNNQRIED 394


>gi|196043850|ref|ZP_03111087.1| tyrosyl-tRNA synthetase [Bacillus cereus 03BB108]
 gi|196025186|gb|EDX63856.1| tyrosyl-tRNA synthetase [Bacillus cereus 03BB108]
          Length = 418

 Score =  271 bits (693), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 149/385 (38%), Positives = 222/385 (57%), Gaps = 19/385 (4%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L  L  RG I+Q ++   L+ L  +  V  Y G+D TA SLH GH+  +++L   Q  GH
Sbjct: 4   LQDLEFRGLINQQTDAEGLEQLLEKESVKLYCGFDPTADSLHIGHMLPVLMLRRFQLAGH 63

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           +PI+L+GGGT +IGDPS +   R +     +    E IK   S+F+++      A M NN
Sbjct: 64  QPIALVGGGTGMIGDPSGKKAERTLNTKDTVAYYTESIKNQLSNFLEFENVDNPATMANN 123

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL ++  I  LR+IG  F +N ML+ ++V SRL  E  +SF EF+YMILQ+YDF+ L 
Sbjct: 124 YDWLGNLDVISFLRDIGKNFGLNYMLAKDTVASRL--ETGISFTEFSYMILQSYDFLNLY 181

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKT-PKLFALTSPLLTTASGTKMGKTLSGAIWL 247
           ++++CRLQ+GGSDQWGNI  G++L  + +   K F LT PL+T + GTK GKT  GAIWL
Sbjct: 182 QHHNCRLQIGGSDQWGNITAGLELIRKSEEDAKAFGLTIPLVTKSDGTKFGKTEGGAIWL 241

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATE 305
           + E T+PY F+Q+W N DD DVV + K  T L   EI  + K   +  E   A+K +  E
Sbjct: 242 DPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLSHEEILELEKQVAEAPEKRAAQKALGAE 301

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTL 355
           +T +VHG E  E+A   +   F  S+            + +P++  + ++      L+ L
Sbjct: 302 MTKLVHGEEALEQAIKISAALFSGSVAELTASEIEQGFKDVPSVERTAEDTV----LIDL 357

Query: 356 IVKAGFATSTNEARRHLKSNAIKIN 380
           +V++  + S  +AR  + + AI +N
Sbjct: 358 LVESKISPSKRQAREDVTNGAIYVN 382


>gi|269219360|ref|ZP_06163214.1| tyrosine--tRNA ligase [Actinomyces sp. oral taxon 848 str. F0332]
 gi|269211153|gb|EEZ77493.1| tyrosine--tRNA ligase [Actinomyces sp. oral taxon 848 str. F0332]
          Length = 420

 Score =  271 bits (693), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 151/413 (36%), Positives = 227/413 (54%), Gaps = 9/413 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +D L  L  RG I Q ++   L    ++G VT Y G+D TA+SLH GHL  + ++  LQ 
Sbjct: 2   TDILDELQWRGLIAQHTDIDALRAALAEGPVTFYCGFDPTAASLHHGHLVAVKVMRHLQM 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH P++L+GG T +IGDPS R E R +  +  +      ++G   S + +  G+  A +
Sbjct: 62  AGHNPLALVGGATGLIGDPSGRKEERNLNEADVVAGWAAALRGQLESLLDF-EGEHPARI 120

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  W   +  ID LR+IG  F +  MLS ++V  RL+ ++ +SF EF+Y ILQA D++
Sbjct: 121 VNNLDWTGPMSTIDFLRDIGKNFRLGTMLSKDTVARRLESDEGISFTEFSYQILQANDYL 180

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           +L + Y C L++GG+DQWGN++ G+DL  +++   +  +T+PL+T + GTK GKT  GAI
Sbjct: 181 QLYRRYGCTLEVGGNDQWGNLVGGMDLIRKVEGESVHVMTNPLITKSDGTKFGKTAGGAI 240

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKKIIA 303
           WLN EM SPY F+Q+W N  D DV+   K  T     EI  +  A  +     EA+K +A
Sbjct: 241 WLNPEMFSPYRFYQFWLNTADDDVIHMLKVFTFRTREEIAELETALAERPHAREAQKALA 300

Query: 304 TEITTMVHGREEAEKAATAAMECF-DMSIHSQHMPTISISKDEVSRGMG-----LLTLIV 357
            ++TT VHG +  E+   A+   F    + S    T++ +  E+ R  G     L+ L V
Sbjct: 301 EDVTTWVHGADATERVKAASRALFGGGGLESLDARTLADAVAELPRAEGSVGTPLIELFV 360

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
             G       ARR + S  + +NN  I +    +   D    G + L  GKKN
Sbjct: 361 ATGLEKGLGAARRTVASGGLYLNNVKIDDGAKVLGSSDLLPGGVVLLRRGKKN 413


>gi|332520083|ref|ZP_08396547.1| tyrosyl-tRNA synthetase [Lacinutrix algicola 5H-3-7-4]
 gi|332044642|gb|EGI80836.1| tyrosyl-tRNA synthetase [Lacinutrix algicola 5H-3-7-4]
          Length = 436

 Score =  271 bits (693), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 156/436 (35%), Positives = 243/436 (55%), Gaps = 30/436 (6%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           F+  L  RG +H I    E  +  S+ + TAYIG+D T+ SLH G L  ++LL  L+K G
Sbjct: 5   FVEELRWRGMVHDIMPGTEEQL--SKEMTTAYIGFDPTSDSLHIGSLVPIILLVHLEKAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA-LML 126
           HKP++L+GG T +IGDPS + + R ++  + +  N++ IK + S F+ + + K +A +++
Sbjct: 63  HKPVALVGGATGMIGDPSGKSDERNLLDEKALAHNVQGIKNVLSRFLDFNSTKKNAPVLV 122

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ---SLSFLEFNYMILQAYD 183
           NN  W+ +  +ID  R++G   +VN M++ +SV+ RL  E+    +SF EF Y ++Q YD
Sbjct: 123 NNYDWMKNFSFIDFARDVGKRLTVNYMMAKDSVKKRLSGEEGSVGMSFTEFTYQLIQGYD 182

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERL----KTPKLFALTSPLLTTASGTKMGK 239
           F  L K  DC+LQMGGSDQWGNI  G +L  R+    +T K +A+T PL+T A G+K GK
Sbjct: 183 FYYLHKEMDCKLQMGGSDQWGNITTGTELVRRMNVGDETAKAYAMTCPLITKADGSKFGK 242

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAK 299
           +  G +WL+ + TS Y F+Q+W N  D D   + K  T L    I+ +   + KE    +
Sbjct: 243 SEGGNVWLDTDKTSVYKFYQFWLNTTDEDAEKYIKIFTFLDKETIENLVA-EHKETPHLR 301

Query: 300 ---KIIATEITTMVHGREE---AEKAATAAM-ECFDMSIHS----------QHMPTISIS 342
              K +A E+TT VH   +   AEKA+     + F+  I +          + +P   + 
Sbjct: 302 LLQKQLAKEVTTFVHSEADFLNAEKASGILFSKTFNEDIRTLDEKLFLDVFEGVPQAELP 361

Query: 343 KDEVSRGMGLL-TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
           K ++  G+ ++  L  K  F  S  EARR LK NA+ +N   +  + L I  +D  +   
Sbjct: 362 KADLDNGIDMIAALAAKTNFLNSNGEARRALKENAVSVNKEKVKEDYL-ITNKDLINGKY 420

Query: 402 IKLSFGKKNHIICHLC 417
           + L+ GKKN  I  + 
Sbjct: 421 VVLNKGKKNTYIIKVV 436


>gi|21909609|ref|NP_663877.1| tyrosyl-tRNA synthetase [Streptococcus pyogenes MGAS315]
 gi|28894986|ref|NP_801336.1| tyrosyl-tRNA synthetase [Streptococcus pyogenes SSI-1]
 gi|81759440|sp|Q8K8W5|SYY_STRP3 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|21903790|gb|AAM78680.1| putative tyrosine-tRNA ligase [Streptococcus pyogenes MGAS315]
 gi|28810231|dbj|BAC63169.1| putative tyrosine-tRNA ligase [Streptococcus pyogenes SSI-1]
          Length = 418

 Score =  271 bits (693), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 142/396 (35%), Positives = 221/396 (55%), Gaps = 17/396 (4%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG + Q ++ + L    ++G V+ Y GYD TA SLH GHL  ++    LQ  GHKP 
Sbjct: 7   LKARGLVFQTTDEQALVKALTEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAGHKPY 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+D  R +   + + E  +KIKG  S+F+ +  G   A ++NN  W
Sbjct: 67  ALVGGATGLIGDPSFKDAERSLQTKETVLEWSDKIKGQLSTFLDFENGDNKAELVNNYDW 126

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
              I +ID LR++G +F+VN M+S +SV+ R+  E  +S+ EF Y I+Q YDF EL   +
Sbjct: 127 FSQISFIDFLRDVGKYFTVNYMMSKDSVKKRI--ETGISYTEFAYQIMQGYDFYELNDKH 184

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
           +  LQ+GGSDQWGN+  G +L  +        +T PL+T ++G K GK+   A+WL+ + 
Sbjct: 185 NVTLQIGGSDQWGNMTAGTELLRKKADKTGHVMTVPLITDSTGKKFGKSEGNAVWLDADK 244

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATEITTM 309
           TSPY  +Q+W N+ D D V F K  T L + EI  +        +E  A+K +A E+ T+
Sbjct: 245 TSPYEMYQFWLNVMDDDAVRFLKIFTFLSLDEIAEIESQFNAARHERLAQKTLAREVVTL 304

Query: 310 VHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIVKA 359
           VHG E  ++A     + F  +I +           ++P   +  ++    + L+ ++V A
Sbjct: 305 VHGEEAYKQALNITEQLFAGNIKNLSANELKQGLSNVPNYHVQSED---SLNLVDMLVTA 361

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           G + S  +AR  +++ AI IN   I +   Q+   D
Sbjct: 362 GISPSKRQAREDVQNGAIYINGDRIQDLDYQLSNDD 397


>gi|94502122|ref|ZP_01308624.1| tyrosyl-tRNA synthetase [Oceanobacter sp. RED65]
 gi|94425759|gb|EAT10765.1| tyrosyl-tRNA synthetase [Oceanobacter sp. RED65]
          Length = 430

 Score =  271 bits (692), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 150/394 (38%), Positives = 228/394 (57%), Gaps = 20/394 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG  +  +   EL      G  T Y G+D TA SLH G L  L++L   Q+ GH+P+
Sbjct: 9   LKARGLFNDCTAEAELIEKLESGCQTLYCGFDPTADSLHIGSLVPLLVLKRFQEAGHRPL 68

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+   R++     +   +EK+K   S+FI +  G   A ++NN  W
Sbjct: 69  ALVGGATGLIGDPSFKAAERQLNGPDVVAGWVEKLKAQVSAFIDFDAGDKSAKVVNNLDW 128

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQS-LSFLEFNYMILQAYDFVELAKN 190
           +  +  I+ LR++G +FSVN+M+  ESV+ R++RE S +SF EF YM+LQ+YDF +L + 
Sbjct: 129 VGEMNVIEFLRDVGKYFSVNQMIQKESVKQRIEREGSGISFTEFTYMLLQSYDFAKLNET 188

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKE 250
             C LQ+GGSDQWGNI  G +L  R+   ++F LT PL+T A GTK GKT SG IWL+ +
Sbjct: 189 ESCVLQIGGSDQWGNITGGTELTRRMHGNQVFGLTLPLVTKADGTKFGKTESGTIWLDPK 248

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM----AKLQGKEINEAKKIIATEI 306
            TSPY F+Q+W N  DADV  F +  T L + EI+ +    A++QG++   A+ I+A E+
Sbjct: 249 RTSPYAFFQFWMNTADADVYKFLRYFTFLSIEEIEAIEKADAEVQGRK--SAQGILAKEV 306

Query: 307 TTMVHGRE--EAEKAATAAMECFDMSIHSQH---------MPTISISKDEVSRGMGLLTL 355
           T ++HG E   A +  T A+   D +  S+H         +P+  +   E++    L ++
Sbjct: 307 TRLLHGEEGLAAAERITEALFSGDATQLSEHDLEQIKQDGLPSSDLDTSELAD-KPLTSI 365

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKL 389
           + +AG      + +  L  NA+ +N      + L
Sbjct: 366 LSEAGLGQG-KQIKDALGRNAVIVNGQAYGMDDL 398


>gi|229129942|ref|ZP_04258908.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus BDRD-Cer4]
 gi|228653633|gb|EEL09505.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus BDRD-Cer4]
          Length = 418

 Score =  271 bits (692), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 149/385 (38%), Positives = 222/385 (57%), Gaps = 19/385 (4%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L  L  RG I+Q ++   L+ L  +  V  Y G+D TA SLH GH+  +++L   Q  GH
Sbjct: 4   LQDLEFRGLINQQTDAEGLEQLLEKESVKLYCGFDPTADSLHIGHMLPVLMLRRFQLAGH 63

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           +PI+L+GGGT +IGDPS +   R +     +    E IK   S+F+++      A M NN
Sbjct: 64  QPIALVGGGTGMIGDPSGKKAERTLNTKDTVAYYTESIKNQLSNFLEFENVDNPATMANN 123

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL ++  I  LR+IG  F +N ML+ ++V SRL  E  +SF EF+YMILQ+YDF+ L 
Sbjct: 124 YDWLGNLDVISFLRDIGKNFGLNYMLAKDTVASRL--ETGISFTEFSYMILQSYDFLNLY 181

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKT-PKLFALTSPLLTTASGTKMGKTLSGAIWL 247
           +++ CRLQ+GGSDQWGNI  G++L  + +   K F LT PL+T + GTK GKT  GAIWL
Sbjct: 182 QHHKCRLQIGGSDQWGNITAGLELIRKSEEDAKAFGLTIPLVTKSDGTKFGKTEGGAIWL 241

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATE 305
           + E T+PY F+Q+W N DD DVV + K  T L   EI  + K   +  E   A+K + +E
Sbjct: 242 DPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLSHEEILELEKQVAEAPEKRAAQKALGSE 301

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTL 355
           +T +VHG E  E+A   +   F  S+            + +P++  + ++      L+ L
Sbjct: 302 MTKLVHGEEALEQAIKISAALFSGSVAELTASEIEQGFKDVPSVERTAEDTV----LIDL 357

Query: 356 IVKAGFATSTNEARRHLKSNAIKIN 380
           +V++  + S  +AR  + + AI +N
Sbjct: 358 LVESKISPSKRQAREDVTNGAIYVN 382


>gi|223937057|ref|ZP_03628965.1| tyrosyl-tRNA synthetase [bacterium Ellin514]
 gi|223894338|gb|EEF60791.1| tyrosyl-tRNA synthetase [bacterium Ellin514]
          Length = 426

 Score =  271 bits (692), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 149/416 (35%), Positives = 233/416 (56%), Gaps = 14/416 (3%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG +   ++  EL    + G +T Y G+D T  SLH G+L  L+ L   Q  GH PI
Sbjct: 7   LEWRGLLADCTDKVELLKRLAAGPITLYAGFDPTGDSLHVGNLVPLLALRRFQLFGHIPI 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L GG T  IGDPS +   R+++  + +  NI  IK      + +      A +L+N TW
Sbjct: 67  ALAGGATGSIGDPSGKTVERQLLTKEVLDTNIASIKVQLRRLLDFDAAANPARLLDNNTW 126

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK-REQSLSFLEFNYMILQAYDFVELAKN 190
              + Y+D LRE+G  FSVN M++ ESVR+R++ RE  +S+ EF+YM+LQA+DF  L K 
Sbjct: 127 TAPVSYLDFLREVGKHFSVNMMVAKESVRARMEDRETGISYTEFSYMLLQAFDFYHLRKE 186

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKE 250
           ++C LQ+GGSDQWGNI  G DL  +  +  +F LT PL+T A G+K GK+++GAIW++ +
Sbjct: 187 FNCELQIGGSDQWGNITAGSDLCRKKLSAHVFGLTLPLITNADGSKFGKSVAGAIWVDAK 246

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATEITT 308
            TS Y F+Q+W N DD DV+ + K  T L   EI  + +          A K +A  +T 
Sbjct: 247 KTSVYRFYQFWINTDDRDVIRYLKFFTFLTQDEITALEQQHTANPGARVAHKALAKAMTD 306

Query: 309 MVHGREEAEKAATAAMECF--DMSIHSQ--------HMPTISISKDEV-SRGMGLLTLIV 357
           ++HG +   +A  A+   F  ++S  S+         +PT  + K ++   G+ L+ L+V
Sbjct: 307 LIHGEQATTEAIRASEILFGGELSGISESTFNDIVGEVPTKDLEKSKLEGAGIPLVELLV 366

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            +G + S  +AR+ ++   + +NN   +N +  +   D     ++ L  GKKN+ +
Sbjct: 367 HSGLSPSKGQARKDIEGGGVNLNNVREANFQRPVTTSDLLFGKHLLLRKGKKNYTV 422


>gi|19745275|ref|NP_606411.1| tyrosyl-tRNA synthetase [Streptococcus pyogenes MGAS8232]
 gi|81633253|sp|Q8P2Y5|SYY_STRP8 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|19747371|gb|AAL96910.1| putative tyrosine-tRNA ligase [Streptococcus pyogenes MGAS8232]
          Length = 418

 Score =  271 bits (692), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 142/396 (35%), Positives = 221/396 (55%), Gaps = 17/396 (4%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG + Q ++ + L    ++G V+ Y GYD TA SLH GHL  ++    LQ  GHKP 
Sbjct: 7   LKARGLVFQTTDEQALVKALTEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAGHKPY 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+D  R +   + + E  +KIKG  S+F+ +  G   A ++NN  W
Sbjct: 67  ALVGGATGLIGDPSFKDAERSLQTKETVLEWSDKIKGQLSTFLDFENGDNKAELVNNYDW 126

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
              I +ID LR++G +F+VN M+S +SV+ R+  E  +S+ EF Y I+Q YDF EL   +
Sbjct: 127 FSQISFIDFLRDVGKYFTVNYMMSKDSVKKRI--ETGISYTEFAYQIMQGYDFYELNDKH 184

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
           +  LQ+GGSDQWGN+  G +L  +        +T PL+T ++G K GK+   A+WL+ + 
Sbjct: 185 NVTLQIGGSDQWGNMTAGTELLRKKADKTGHVMTVPLITDSTGKKFGKSEGNAVWLDADK 244

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATEITTM 309
           TSPY  +Q+W N+ D D V F K  T L + EI  +        +E  A+K +A E+ T+
Sbjct: 245 TSPYEMYQFWLNVMDDDAVRFLKIFTFLSLDEIAEIESEFNAARHERLAQKTLAREVVTL 304

Query: 310 VHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIVKA 359
           VHG E  ++A     + F  +I +           ++P   +  ++    + L+ ++V A
Sbjct: 305 VHGEEAYKQALNITEQLFAGNIKNLSANELKQGLSNVPNYHVQSED---SLNLVDMLVTA 361

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           G + S  +AR  +++ AI IN   I +   Q+   D
Sbjct: 362 GISPSKRQAREDVQNGAIYINGDRIQDLDYQLSNDD 397


>gi|50913475|ref|YP_059447.1| tyrosyl-tRNA synthetase [Streptococcus pyogenes MGAS10394]
 gi|81372489|sp|Q5XE99|SYY_STRP6 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|50902549|gb|AAT86264.1| Tyrosyl-tRNA synthetase [Streptococcus pyogenes MGAS10394]
          Length = 418

 Score =  271 bits (692), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 141/396 (35%), Positives = 221/396 (55%), Gaps = 17/396 (4%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG + Q ++ + L    ++G V+ Y GYD TA SLH GHL  ++    LQ  GHKP 
Sbjct: 7   LKARGLVFQTTDEQALVKALTEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAGHKPY 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+D  R +   + + E  +KIKG  S+F+ +  G   A ++NN  W
Sbjct: 67  ALVGGATGLIGDPSFKDAERSLQTKETVLEWSDKIKGQLSAFLDFENGDNKAELVNNYDW 126

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
              I +ID LR++G +F+VN M+S +SV+ R+  E  +S+ EF Y I+Q YDF EL   +
Sbjct: 127 FSQISFIDFLRDVGKYFTVNYMMSKDSVKKRI--ETGISYTEFAYQIMQGYDFYELNDKH 184

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
           +  LQ+GGSDQWGN+  G +L  +        +T PL+T ++G K GK+   A+WL+ + 
Sbjct: 185 NVTLQIGGSDQWGNMTAGTELLRKKADKTGHVMTVPLITDSTGKKFGKSEGNAVWLDADK 244

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATEITTM 309
           TSPY  +Q+W N+ D D V F K  T L + EI  +        +E  A+K +A E+ T+
Sbjct: 245 TSPYEMYQFWLNVMDDDAVRFLKIFTFLSLDEIAEIETQFNAARHERLAQKTLAREVVTL 304

Query: 310 VHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIVKA 359
           VHG E  ++A     + F  +I +           ++P   +  ++    + L+ ++V A
Sbjct: 305 VHGEEAYKQALNITEQLFAGNIKNLSANELKQGLSNVPNYHVQSED---SLNLVDMLVTA 361

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           G + S  +AR  +++ AI IN   + +   Q+   D
Sbjct: 362 GISPSKRQAREDVQNGAIYINGDRVQDLDYQLSNDD 397


>gi|94987712|ref|YP_595813.1| tyrosyl-tRNA synthetase [Streptococcus pyogenes MGAS9429]
 gi|94989592|ref|YP_597692.1| tyrosyl-tRNA synthetase [Streptococcus pyogenes MGAS10270]
 gi|94991581|ref|YP_599680.1| tyrosyl-tRNA synthetase [Streptococcus pyogenes MGAS2096]
 gi|123080347|sp|Q1JJ25|SYY_STRPD RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|123257867|sp|Q1JE22|SYY_STRPB RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|123258252|sp|Q1JNY0|SYY_STRPC RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|94541220|gb|ABF31269.1| tyrosyl-tRNA synthetase [Streptococcus pyogenes MGAS9429]
 gi|94543100|gb|ABF33148.1| Tyrosyl-tRNA synthetase [Streptococcus pyogenes MGAS10270]
 gi|94545089|gb|ABF35136.1| Tyrosyl-tRNA synthetase [Streptococcus pyogenes MGAS2096]
          Length = 418

 Score =  271 bits (692), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 141/396 (35%), Positives = 221/396 (55%), Gaps = 17/396 (4%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG + Q ++ + L    ++G V+ Y GYD TA SLH GHL  ++    LQ  GHKP 
Sbjct: 7   LKARGLVFQTTDEQALVKALTEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAGHKPY 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+D  R +   + + E  +KIKG  S+F+ +  G   A ++NN  W
Sbjct: 67  ALVGGATGLIGDPSFKDAERSLQTKETVLEWSDKIKGQLSTFLDFENGDNKAELVNNYDW 126

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
              I +ID LR++G +F+VN M+S +SV+ R+  E  +S+ EF Y I+Q YDF EL   +
Sbjct: 127 FSQISFIDFLRDVGKYFTVNYMMSKDSVKKRI--ETGISYTEFAYQIMQGYDFYELNDKH 184

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
           +  LQ+GGSDQWGN+  G +L  +        +T PL+T ++G K GK+   A+WL+ + 
Sbjct: 185 NVTLQIGGSDQWGNMTAGTELLRKKADKTGHVMTVPLITDSTGKKFGKSEGNAVWLDADK 244

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATEITTM 309
           TSPY  +Q+W N+ D D V F K  T L + EI  +        +E  A+K +A E+ T+
Sbjct: 245 TSPYEMYQFWLNVMDDDAVRFLKIFTFLSLDEIAEIETQFNAARHERLAQKTLAREVVTL 304

Query: 310 VHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIVKA 359
           VHG E  ++A     + F  +I +           ++P   +  ++    + L+ ++V A
Sbjct: 305 VHGEEAYKQALNITEQLFAGNIKNLSANELKQGLSNVPNYHVQSED---SLNLVDMLVTA 361

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           G + S  +AR  +++ AI IN   + +   Q+   D
Sbjct: 362 GISPSKRQAREDVQNGAIYINGDRVQDLDYQLSNDD 397


>gi|303245599|ref|ZP_07331882.1| tyrosyl-tRNA synthetase [Desulfovibrio fructosovorans JJ]
 gi|302492862|gb|EFL52727.1| tyrosyl-tRNA synthetase [Desulfovibrio fructosovorans JJ]
          Length = 424

 Score =  270 bits (691), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 159/419 (37%), Positives = 235/419 (56%), Gaps = 16/419 (3%)

Query: 12  LSERGFIHQISNPREL-DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           LS RG +HQ S+   L + L + G V  Y G+D TA SLH G+L  L+ L    K GH+P
Sbjct: 7   LSWRGLVHQTSDDAGLREHLETPGRVL-YCGFDPTADSLHIGNLVPLLALARFAKAGHRP 65

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           + L+GG T +IGDPS +D+ R++  ++ I  + EKIK    +F      + +    NN  
Sbjct: 66  LFLLGGATGLIGDPSGKDKERQLKTAETIAASAEKIKTHALAFFARVGVEGEVTPANNLD 125

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQS-LSFLEFNYMILQAYDFVELAK 189
           W   +  I+ LR+IG  F++N M++ +SV+SR+ RE++ +S+ EF+YMILQ+ DF  L +
Sbjct: 126 WTRPMSVIEFLRDIGKHFTINYMMAKDSVKSRIGREETGISYTEFSYMILQSMDFEHLNR 185

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
              C LQ+GG DQ+GNI  G++L  R      + LT PL+TTASG K GK+  GAI+LN 
Sbjct: 186 TLGCTLQIGGGDQFGNITAGLELIRRKTGNTAYGLTFPLITTASGAKFGKSEKGAIFLNP 245

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA--KLQGKEINEAKKIIATEIT 307
           E+TSPY F+QYW N DD DV +F +  T LP  EID +A    +   +  A+K +A E T
Sbjct: 246 ELTSPYAFYQYWINADDRDVCNFLRYFTFLPKEEIDALAVETAERPHLRAAQKRLARETT 305

Query: 308 TMVHGREEAEKAATAAMECFDMS-IHSQHMPTISISKDEVSRGMG---------LLTLIV 357
            M+HG EE  K        F    +H+    T+  +  E + G+          L  L+ 
Sbjct: 306 AMIHGEEELAKVEAVTEALFGGGELHAVDPGTLKAAL-EAAPGLNFEALPDVPPLPKLLA 364

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             G   S ++AR+ +K+  I +NN  + +E   +  +DF     + L  GKKN+ +  L
Sbjct: 365 DIGLCPSNSQARKDIKAGGIYLNNERVPSEDRALVAEDFLGGDLLILRKGKKNYGVVTL 423


>gi|254736771|ref|ZP_05194477.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. Western North
           America USA6153]
          Length = 418

 Score =  270 bits (691), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 150/381 (39%), Positives = 219/381 (57%), Gaps = 11/381 (2%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L  L  RG I+Q ++   L+ L  +  V  Y G+D TA SLH GH+  +++L   Q  GH
Sbjct: 4   LQDLEFRGLINQQTDAEGLEQLLEKESVKLYCGFDPTADSLHIGHMLPVLMLRRFQLAGH 63

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           +PI+L+GGGT +IGDPS +   R +     +    E IK   S+F+++   +  A M NN
Sbjct: 64  QPIALVGGGTGMIGDPSGKKAERTLNTKDTVAYYTESIKNQLSNFLEFENVENPATMANN 123

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL ++  I  LR+IG  F +N ML+ ++V SRL  E  +SF EF+YMILQ+YDF+ L 
Sbjct: 124 YDWLGNLDVISFLRDIGKNFGLNYMLAKDTVASRL--ETGISFTEFSYMILQSYDFLNLY 181

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKT-PKLFALTSPLLTTASGTKMGKTLSGAIWL 247
           ++++CRLQ+GGSDQWGNI  G++L  + +   K F LT PL+T + GTK GKT  GAIWL
Sbjct: 182 QHHNCRLQIGGSDQWGNITAGLELIRKSEEDAKAFGLTIPLVTKSDGTKFGKTEGGAIWL 241

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATE 305
           + E T+PY F+Q+W N DD DVV + K  T L   EI  + K   +  E   A+K +  E
Sbjct: 242 DPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLSHEEILELEKQVAEAPEKRAAQKALGAE 301

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV------SRGMGLLTLIVKA 359
           +T +VHG E  E+A   +   F  S+       I     +V      +    L+ L+V++
Sbjct: 302 MTKLVHGEEALEQAIKISAALFSGSVAELTASEIEQGFKDVPFVERTAEDTVLIDLLVES 361

Query: 360 GFATSTNEARRHLKSNAIKIN 380
             + S  +AR  + + AI +N
Sbjct: 362 KISPSKRQAREDVTNGAIYVN 382


>gi|330827948|ref|YP_004390900.1| Tyrosyl-tRNA synthetase [Aeromonas veronii B565]
 gi|328803085|gb|AEB48284.1| Tyrosyl-tRNA synthetase [Aeromonas veronii B565]
          Length = 421

 Score =  270 bits (691), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 153/399 (38%), Positives = 229/399 (57%), Gaps = 26/399 (6%)

Query: 8   FLSILSERGFIHQISNPREL-DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
            L  L+ERG + Q S+   L D L +    T Y G+D TA SLH GHL  L++L   Q  
Sbjct: 6   LLDELTERGLVAQNSDTAALADHLATP--RTVYCGFDPTAGSLHIGHLVPLLMLRRFQLA 63

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P++L+GG T +IGDPSF+   R +  +  +Q  +  +     + +    G +   ++
Sbjct: 64  GHTPVALVGGATGLIGDPSFKATERSLNSTDTVQGWVASLSAQIRALLPADEGLSAPQLV 123

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDFV 185
           NN  W+  +  +D LR+IG  FSVN ML+ ESVR RL R +Q +SF EF+Y +LQ+YDF 
Sbjct: 124 NNGDWMGQMSALDFLRDIGKHFSVNAMLARESVRQRLARPDQGISFTEFSYALLQSYDFA 183

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L +   C LQ+GG+DQWGNI  G+DL  RL   ++  +T PL+T A GTK GKT  GA+
Sbjct: 184 VLHQRLGCTLQIGGNDQWGNITSGMDLTRRLHQAQVHGMTLPLITKADGTKFGKTEGGAV 243

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM----AKLQGKEINEAKKI 301
           WL+  +TSPY F+Q+W    D DV  F +  + + +SEID +    AK QG++  +A+++
Sbjct: 244 WLDPALTSPYAFYQFWLGTADEDVYRFLRYYSFMSLSEIDALEAEDAKRQGRK--QAQQV 301

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKD-----EVSRGM 350
           +A E+T +VHG     KAA AA++     + S  +  +       +++D      VS   
Sbjct: 302 LANELTELVHG-----KAALAAVQRISELLFSGDVARLGESDLAQLAQDGMPCSTVSGET 356

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKL 389
            L++L+V  G A S   AR  L + AI +N  +  +++L
Sbjct: 357 DLVSLLVSCGLANSRRIARELLAAGAISLNGVLKQDDQL 395


>gi|223043549|ref|ZP_03613594.1| tyrosyl-tRNA synthetase [Staphylococcus capitis SK14]
 gi|222443037|gb|EEE49137.1| tyrosyl-tRNA synthetase [Staphylococcus capitis SK14]
          Length = 420

 Score =  270 bits (691), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 145/379 (38%), Positives = 218/379 (57%), Gaps = 20/379 (5%)

Query: 15  RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLM 74
           RG I+Q ++ + ++ L ++  VT Y G D TA SLH GHL   + L   Q+ GH+PI L+
Sbjct: 12  RGLIYQQTDEQGIEDLLNKEQVTLYCGADPTADSLHIGHLLPFLTLRRFQEHGHRPIVLI 71

Query: 75  GGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCS 134
           GGGT +IGDPS + E R +   ++++ N++ +        ++GT K  A+++NN+ WL  
Sbjct: 72  GGGTGMIGDPSGKSEERVLQTEEQVEANVQGLSKQMHRLFEFGTDKG-AVLVNNKDWLGQ 130

Query: 135 IKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCR 194
           I  I  LR+ G    VN ML  +S+++RL  E  +S+ EF Y ILQA DF  L +  +C+
Sbjct: 131 ISLISFLRDYGKHVGVNYMLGKDSIQTRL--EHGISYTEFTYTILQAIDFGHLNRELNCK 188

Query: 195 LQMGGSDQWGNIICGIDLGERL-KTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTS 253
           +Q+GGSDQWGNI  GI+L  R+    + F LT PL+T + G K GK+ SGA+WL+ E TS
Sbjct: 189 IQVGGSDQWGNITSGIELMRRMYGQTEAFGLTIPLVTKSDGKKFGKSESGAVWLDPEKTS 248

Query: 254 PYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKKIIATEITTMVH 311
           PY F+Q+W N  D DV+ F K  T L   EIDR+  +K +   + EA+K +A  +T  +H
Sbjct: 249 PYEFYQFWINQSDEDVIKFLKYFTFLDKEEIDRLEQSKEEAPHLREAQKALAENVTKFIH 308

Query: 312 GREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIVKAGF 361
           G E    A   +   F   + S          + +P +S+S    S    ++  +++ G 
Sbjct: 309 GEEALNDAIRISKALFSGDLKSLTGKELKEGFKDVPQVSLS----SETTNIIEALIETGI 364

Query: 362 ATSTNEARRHLKSNAIKIN 380
           ATS  +AR  + + AI IN
Sbjct: 365 ATSKRQAREDVNNGAIYIN 383


>gi|228993395|ref|ZP_04153311.1| Tyrosyl-tRNA synthetase 1 [Bacillus pseudomycoides DSM 12442]
 gi|228999442|ref|ZP_04159021.1| Tyrosyl-tRNA synthetase 1 [Bacillus mycoides Rock3-17]
 gi|229006998|ref|ZP_04164626.1| Tyrosyl-tRNA synthetase 1 [Bacillus mycoides Rock1-4]
 gi|228754237|gb|EEM03654.1| Tyrosyl-tRNA synthetase 1 [Bacillus mycoides Rock1-4]
 gi|228760387|gb|EEM09354.1| Tyrosyl-tRNA synthetase 1 [Bacillus mycoides Rock3-17]
 gi|228766463|gb|EEM15106.1| Tyrosyl-tRNA synthetase 1 [Bacillus pseudomycoides DSM 12442]
          Length = 418

 Score =  270 bits (691), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 151/385 (39%), Positives = 221/385 (57%), Gaps = 19/385 (4%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L  L  RG I+Q ++   L  L  +  V  Y G+D TA SLH GH+  +++L   Q  GH
Sbjct: 4   LQDLEFRGLINQQTDAEGLQQLLEKESVKLYCGFDPTADSLHIGHMLPVLMLRRFQLAGH 63

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           +PI+L+GGGT +IGDPS +   R +     +    E IK   S+F+++   +  A M NN
Sbjct: 64  QPIALVGGGTGMIGDPSGKKAERTLNTKDTVAYYTESIKNQLSNFLEFENVENPATMANN 123

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL ++  I  LR+IG  F +N ML+ ++V SRL  E  +SF EF+YMILQ+YDF+ L 
Sbjct: 124 YDWLGNLDVITFLRDIGKNFGLNYMLAKDTVASRL--ETGISFTEFSYMILQSYDFLNLY 181

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKT-PKLFALTSPLLTTASGTKMGKTLSGAIWL 247
           +   CRLQ+GGSDQWGNI  G++L  + +   K F LT PL+T + GTK GKT  GAIWL
Sbjct: 182 QQQGCRLQIGGSDQWGNITAGLELIRKSEEDAKAFGLTIPLVTKSDGTKFGKTEGGAIWL 241

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIATE 305
           + E T+PY F+Q+W N DD DVV + K  T L   EI  + K   +  E   A+K +A+E
Sbjct: 242 DPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLSHEEILELEKQVSEAPEKRAAQKALASE 301

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTL 355
           +T +VHG E  E+A   +   F  S+            + +P++  S ++      L+ L
Sbjct: 302 MTKLVHGAEALEQAIKISAALFSGSVAELTANEIEQGFKDVPSVERSAEDTV----LIDL 357

Query: 356 IVKAGFATSTNEARRHLKSNAIKIN 380
           +V++  + S  +AR  + + AI +N
Sbjct: 358 LVESKISPSKRQAREDVTNGAIYVN 382


>gi|229135496|ref|ZP_04264282.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus BDRD-ST196]
 gi|228647961|gb|EEL04010.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus BDRD-ST196]
          Length = 418

 Score =  270 bits (691), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 149/385 (38%), Positives = 222/385 (57%), Gaps = 19/385 (4%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L  L  RG I+Q ++   L+ L  +  V  Y G+D TA SLH GH+  +++L   Q  GH
Sbjct: 4   LQDLEFRGLINQQTDAEGLEQLLEKESVKLYCGFDPTADSLHIGHMLPVLMLRRFQLAGH 63

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           +PI+L+GGGT +IGDPS +   R +     +    E IK   S+F+++      A M NN
Sbjct: 64  QPIALVGGGTGMIGDPSGKKAERTLNTKDTVAYYTESIKNQLSNFLEFENVDNPATMANN 123

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL ++  I  LR+IG  F +N ML+ ++V SRL  E  +SF EF+YMILQ+YDF+ L 
Sbjct: 124 YDWLGNLDVITFLRDIGKNFGLNYMLAKDTVASRL--ETGISFTEFSYMILQSYDFLNLY 181

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKT-PKLFALTSPLLTTASGTKMGKTLSGAIWL 247
           + ++CRLQ+GGSDQWGNI  G++L  + +   K F LT PL+T + GTK GKT  GAIWL
Sbjct: 182 QQHNCRLQIGGSDQWGNITAGLELIRKSEEDAKAFGLTIPLVTKSDGTKFGKTEGGAIWL 241

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATE 305
           + E T+PY F+Q+W N DD DVV + K  T L   EI  + K   +  E   A+K + +E
Sbjct: 242 DPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLSHEEILELEKQVTEAPEKRAAQKSLGSE 301

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTL 355
           +T +VHG E  E+A   +   F  S+            + +P++  + ++      L+ L
Sbjct: 302 MTKLVHGEEALEQAIKISAALFSGSVAELTASEIEQGFKDVPSVERTAEDTV----LIDL 357

Query: 356 IVKAGFATSTNEARRHLKSNAIKIN 380
           +V++  + S  +AR  + + AI +N
Sbjct: 358 LVESKISPSKRQAREDVTNGAIYVN 382


>gi|146319969|ref|YP_001199680.1| tyrosyl-tRNA synthetase [Streptococcus suis 98HAH33]
 gi|253751034|ref|YP_003024175.1| tyrosyl-tRNA synthetase [Streptococcus suis SC84]
 gi|253752935|ref|YP_003026075.1| tyrosyl-tRNA synthetase [Streptococcus suis P1/7]
 gi|253754759|ref|YP_003027899.1| tyrosyl-tRNA synthetase [Streptococcus suis BM407]
 gi|189029779|sp|A4VYU1|SYY_STRS2 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|145690775|gb|ABP91280.1| Tyrosyl-tRNA synthetase [Streptococcus suis 98HAH33]
 gi|251815323|emb|CAZ50892.1| putative tyrosyl-tRNA synthetase [Streptococcus suis SC84]
 gi|251817223|emb|CAZ54947.1| putative tyrosyl-tRNA synthetase [Streptococcus suis BM407]
 gi|251819180|emb|CAR44342.1| putative tyrosyl-tRNA synthetase [Streptococcus suis P1/7]
 gi|292557577|gb|ADE30578.1| Tyrosyl-tRNA synthetase [Streptococcus suis GZ1]
 gi|319757286|gb|ADV69228.1| tyrosyl-tRNA synthetase [Streptococcus suis JS14]
          Length = 418

 Score =  270 bits (691), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 142/400 (35%), Positives = 219/400 (54%), Gaps = 26/400 (6%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG + Q ++   L    ++G V+ Y GYD TA SLH GHL  ++    LQ  GHKP 
Sbjct: 7   LKARGLVFQTTDEEALVKALTEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAGHKPY 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+D  R +     +   + KI+G  S F+ +  G   A M+NN  W
Sbjct: 67  ALVGGATGLIGDPSFKDAERSLQTKDTVDGWVTKIQGQLSRFLDFENGDNKAEMVNNYDW 126

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
              I +ID LR++G +++VN M+S +SV+ R+  E  +S+ EF Y I+Q YDF EL   +
Sbjct: 127 FSDISFIDFLRDVGKYYTVNYMMSKDSVKKRI--ETGISYTEFAYQIMQGYDFYELNDKH 184

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
           +  LQ+GGSDQWGN+  G +L  R        +T PL+T ++G K GK+   A+WL+ + 
Sbjct: 185 NVTLQIGGSDQWGNMTAGTELLRRKADKSGHVMTVPLITDSTGKKFGKSEGNAVWLDADK 244

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATEITTM 309
           TSPY  +Q+W N+ D D V F K  T L + EI  + K      +E  A+KI+A E+ T+
Sbjct: 245 TSPYEMYQFWLNVMDDDAVRFLKIFTFLSLDEIAEIEKQFDAARHERLAQKILAKEVVTL 304

Query: 310 VHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIVKA 359
           VHG E   +A     + F  +I +           ++P  ++  ++    + ++ L+V +
Sbjct: 305 VHGEEAYNQALNITEQLFAGNIKNLSAKELKQGLSNVPNYAVQAED---NLNIVELLVTS 361

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDST 399
           G   S  +AR  +++ AI +N           ++QD D T
Sbjct: 362 GIVNSKRQAREDVQNGAIYVNGE---------RVQDLDYT 392


>gi|298373648|ref|ZP_06983637.1| tyrosine--tRNA ligase [Bacteroidetes oral taxon 274 str. F0058]
 gi|298274700|gb|EFI16252.1| tyrosine--tRNA ligase [Bacteroidetes oral taxon 274 str. F0058]
          Length = 430

 Score =  270 bits (691), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 155/425 (36%), Positives = 231/425 (54%), Gaps = 22/425 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG +H I  P   DIL  +  +TAY+G D TA SLH GHL  +M+L   Q+ 
Sbjct: 2   NFVEELRWRGMLHDIM-PGTEDILKKE-CITAYVGIDPTADSLHIGHLCSVMMLKHFQRC 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL-M 125
           GHKPI L+GG T +IGDPS + + R ++    ++ N E I+     F+ +G    +A  +
Sbjct: 60  GHKPIVLVGGATGMIGDPSGKSDERNLLDEDTLRHNQEAIRLQLQKFLDFGDDAPNAAEL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQS--LSFLEFNYMILQAYD 183
           +NN  W+  + ++D  R IG   +VN M+S +SV+ RL  E S  +SF EF Y +LQ +D
Sbjct: 120 VNNYDWMKDVTFLDFTRNIGKHITVNYMMSKDSVKRRLNGEFSAGMSFTEFTYQLLQGFD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ L +  +C+LQMGGSDQWGNI  G +L  R++  + FALT PL+T A GTK GKT +G
Sbjct: 180 FLHLYRTKNCKLQMGGSDQWGNITTGTELIRRIEQSEAFALTCPLITKADGTKFGKTETG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAK--KI 301
            IWL+ E TSPY F+Q+W N  D D   + +  T LP  EI  +        +E K  + 
Sbjct: 240 NIWLSAEYTSPYKFYQFWLNTADEDAERYIRIFTELPHDEIAALVAEHKNAPHERKLQRR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDEVS 347
           +A E+T MVH  E  + A  A+   F  +                 + +P  +I K  + 
Sbjct: 300 LAEEVTVMVHSHEALQMAVEASAILFGNATKEMLSRIDEQTLLSLFEGVPRFTIDKGLLQ 359

Query: 348 RGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+  LTL+ +      S  EAR+ +++N + +N   +++    I L        + +  
Sbjct: 360 SGVQPLTLLAELTNIFPSKGEARKTIQANGLSLNKEKLTDIDRLIGLDSLIGDKYLIVQK 419

Query: 407 GKKNH 411
           GKKN+
Sbjct: 420 GKKNY 424


>gi|296164588|ref|ZP_06847156.1| tyrosine--tRNA ligase [Mycobacterium parascrofulaceum ATCC BAA-614]
 gi|295900068|gb|EFG79506.1| tyrosine--tRNA ligase [Mycobacterium parascrofulaceum ATCC BAA-614]
          Length = 426

 Score =  270 bits (691), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 156/420 (37%), Positives = 232/420 (55%), Gaps = 18/420 (4%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S  L  L  RG I Q ++   L     +G +T Y G+D TA+SLHAGHL  L+ L   Q+
Sbjct: 3   SGILDELGWRGLIAQSTDLGALAAEAQRGPMTVYAGFDPTAASLHAGHLVPLLALRRFQR 62

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQE-IQENIEKIKGIFSSFIKY---GTGKT 121
            GH+PI L GG T +IGDP  RD   R +   + + E  E+I+G    F+ +   G   T
Sbjct: 63  AGHRPIVLAGGATGMIGDP--RDVGERTLNEADTVAEWTERIRGQLERFVDFSDSGESAT 120

Query: 122 DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA 181
            A+++NN  W   +  I+ LR++G  FSVN ML  ++VR RL+ E  +S+ EF+YM+LQA
Sbjct: 121 GAVVVNNLDWTAPLSAIEFLRDLGKHFSVNVMLDRDTVRRRLEGE-GISYTEFSYMLLQA 179

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK-T 240
            D+VEL + Y C LQ+GGSDQWGNII G+ L  +     + ALT PL+T A GTK GK T
Sbjct: 180 NDYVELHRRYGCALQIGGSDQWGNIIAGVRLVRQKLGATVHALTVPLVTAADGTKFGKST 239

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEA 298
             G++WL+  MT+PY ++QY+ N  DADV+ + +  T L   E+  +  A  +  +   A
Sbjct: 240 GGGSLWLDPAMTTPYAWYQYFFNTADADVIRYLRWFTFLTADELGELEQATAERPQQRAA 299

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECF--------DMSIHSQHMPTISISKDEVSRGM 350
           ++ +A E+T +VHG    E    A+   F        D +  +  +   S+++ +     
Sbjct: 300 QRRLARELTVLVHGEAATEAVEHASRALFGQGELDRLDEATLAAALREASVAELKPGGAD 359

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
           G++ L+V +G + S   ARR L    + +NN  I NE+   +  DF     + L  GK+ 
Sbjct: 360 GIVDLLVSSGLSESRKAARRTLNEGGVSVNNVRIDNEEWAPRPSDFLHGRWLVLRRGKRT 419


>gi|126651336|ref|ZP_01723543.1| tyrosyl-tRNA synthetase [Bacillus sp. B14905]
 gi|126591865|gb|EAZ85948.1| tyrosyl-tRNA synthetase [Bacillus sp. B14905]
          Length = 422

 Score =  270 bits (690), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 142/395 (35%), Positives = 235/395 (59%), Gaps = 20/395 (5%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           ++ L  L  RG ++Q ++   +  L  +  V+ Y G D TA S+H GH+  L+ L   QK
Sbjct: 3   NELLQDLEWRGLLYQQTDADGMAKLLEEQSVSLYCGVDPTADSMHIGHIVPLLTLRRFQK 62

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+PI L+GG T +IGDPS R E R++   ++I +N++ I+G       +      A +
Sbjct: 63  AGHRPILLVGGATGMIGDPSGRSEERQLQTVEQIDKNVQGIRGQLERIFDFAEAGNGAQL 122

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  W+ +I  I+ LR+ G   +VN ML+ +++ SRL  +  +SF EF Y ++Q  D+ 
Sbjct: 123 VNNRDWIGNINTIEFLRDYGKLINVNYMLAKDTIASRL--DTGISFTEFAYTLIQGIDYN 180

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERL--KTPKLFALTSPLLTTASGTKMGKTLSG 243
            L  +Y+CR+Q+GGSDQWGNI  G+++  +   +  K F +T PL+T A GTK GKT  G
Sbjct: 181 HLYNHYNCRIQVGGSDQWGNITTGLEVIRKTHEEETKAFGITIPLVTKADGTKFGKTAGG 240

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE--INEAKKI 301
           A+WL+ + TSPY F+Q+W N  DADV+ + K  T L   EI+ +A    +E  + +A+K 
Sbjct: 241 AVWLDGKKTSPYEFYQFWINAADADVIKYLKIFTFLTREEIEALAVSVEEEPHLRKAQKA 300

Query: 302 IATEITTMVHGREEAEKA--ATAAMECFDMSIHS--------QHMPTISISKDEVSRGMG 351
           +A E+T ++HG+E  E+A   TAA+   D+   S        + +P+I ++K++ +    
Sbjct: 301 LAEEMTRLIHGQEALEQAIRITAALFSGDLKALSAEEMKDAFKDVPSIEMAKEDKN---- 356

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISN 386
           ++ L+V+AG ++S  +AR  + + AI +N   +++
Sbjct: 357 IVDLLVEAGISSSKRQAREDVSNGAISVNGEKVTD 391


>gi|309799396|ref|ZP_07693636.1| tyrosyl-tRNA synthetase [Streptococcus infantis SK1302]
 gi|308116984|gb|EFO54420.1| tyrosyl-tRNA synthetase [Streptococcus infantis SK1302]
          Length = 371

 Score =  270 bits (690), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 141/365 (38%), Positives = 208/365 (56%), Gaps = 17/365 (4%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L ERG I Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  GHKP 
Sbjct: 7   LKERGLIFQTTDEEALRKALEEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAGHKPY 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+D  R +     ++  ++ I+G  S F+ +  G+  A+M+NN  W
Sbjct: 67  ALVGGATGLIGDPSFKDAERSLQTKDTVEGWVKSIQGQLSRFLDFENGENKAVMVNNYDW 126

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
             SI +ID LR++G +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF  L + +
Sbjct: 127 FGSISFIDFLRDVGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFYVLNQEH 184

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
           +  LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WLN E 
Sbjct: 185 NVTLQIGGSDQWGNMTAGTELLRRKADKTGHVITVPLITDATGKKFGKSEGNAVWLNPEK 244

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATEITTM 309
           TSPY  +Q+W N+ DAD V F K  T L + EI+ + K      +E  A+K++A E+ T+
Sbjct: 245 TSPYEMYQFWMNVMDADAVRFLKIFTFLSLDEIEDIRKRFEAAPHERLAQKVLAREVVTL 304

Query: 310 VHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIVKA 359
           VHG E  ++A     + F  +I +          + +P   +  DE      ++ L+V +
Sbjct: 305 VHGEEAYKEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVQADE---NHNIVELLVSS 361

Query: 360 GFATS 364
           G   S
Sbjct: 362 GVVNS 366


>gi|42783842|ref|NP_981089.1| tyrosyl-tRNA synthetase [Bacillus cereus ATCC 10987]
 gi|81408860|sp|Q72Z73|SYY1_BACC1 RecName: Full=Tyrosyl-tRNA synthetase 1; AltName:
           Full=Tyrosine--tRNA ligase 1; Short=TyrRS 1
 gi|42739772|gb|AAS43697.1| tyrosyl-tRNA synthetase [Bacillus cereus ATCC 10987]
          Length = 418

 Score =  270 bits (690), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 148/385 (38%), Positives = 222/385 (57%), Gaps = 19/385 (4%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L  L  RG I+Q ++   L+ L  +  V  Y G+D TA SLH GH+  +++L   Q  GH
Sbjct: 4   LQDLEFRGLINQQTDAEGLEQLLEKESVKLYCGFDPTADSLHIGHMLPVLMLRRFQLAGH 63

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           +PI+L+GGGT +IGDPS +   R +     +    E IK   S+F+++      A M NN
Sbjct: 64  QPIALVGGGTGMIGDPSGKKAERTLNTKDTVAYYTESIKNQLSNFLEFENVDNPATMANN 123

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL ++  I  LR+IG  F +N ML+ ++V SRL  E  +SF EF+YMILQ+YDF+ L 
Sbjct: 124 YDWLGNLDVISFLRDIGKNFGLNYMLAKDTVASRL--ETGISFTEFSYMILQSYDFLNLY 181

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKT-PKLFALTSPLLTTASGTKMGKTLSGAIWL 247
           ++++CRLQ+GGSDQWGNI  G++L  + +   K + LT PL+T + GTK GKT  GAIWL
Sbjct: 182 QHHNCRLQIGGSDQWGNITAGLELIRKSEEDAKAYGLTIPLVTKSDGTKFGKTEGGAIWL 241

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATE 305
           + E T+PY F+Q+W N DD DVV + K  T L   EI  + K   +  E   A+K +  E
Sbjct: 242 DPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLSHEEILELEKQVAEAPEKRAAQKALGAE 301

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTL 355
           +T +VHG E  E+A   +   F  S+            + +P++  + ++      L+ L
Sbjct: 302 MTKLVHGEEALEQAIKISAALFSGSVAELTASEIEQGFKDVPSVERTAEDTV----LIDL 357

Query: 356 IVKAGFATSTNEARRHLKSNAIKIN 380
           +V++  + S  +AR  + + AI +N
Sbjct: 358 LVESKISPSKRQAREDVTNGAIYVN 382


>gi|270295162|ref|ZP_06201363.1| tyrosyl-tRNA synthetase [Bacteroides sp. D20]
 gi|270274409|gb|EFA20270.1| tyrosyl-tRNA synthetase [Bacteroides sp. D20]
          Length = 430

 Score =  270 bits (690), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 152/427 (35%), Positives = 228/427 (53%), Gaps = 22/427 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG +H +    E   L ++  VTAYIG+D TA SLH GHL  +M+L   Q+ 
Sbjct: 2   NFVEELRWRGMLHDMMPGTEE--LLAKEQVTAYIGFDPTADSLHIGHLCSVMILRHFQRC 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD-ALM 125
           GHKP++L+GG T +IGDPS +   R ++  + +Q N+  +K   S F+ + +   + A +
Sbjct: 60  GHKPLALIGGATGMIGDPSGKSAERNLLTEETLQRNLAGMKAQLSKFLDFDSDAPNRAEL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQAYD 183
           +NN  W+ +  ++D  RE+G   +VN M++ +SV+ RL  E    LSF EF Y +LQ YD
Sbjct: 120 VNNYDWMKNFTFLDFAREVGKHITVNYMMAKDSVKKRLNGEARDGLSFTEFTYQLLQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ L +   C+LQMGGSDQWGNI  G +L  R    ++FALTSPL+T A G K GKT SG
Sbjct: 180 FLHLYETKGCKLQMGGSDQWGNITTGAELIRRTNGGEVFALTSPLITKADGGKFGKTESG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKKI 301
            IWL+   TSPY F+Q+W N+ D D   + K  T L   EID +         +   +K 
Sbjct: 240 NIWLDPRYTSPYKFYQFWLNVSDEDAKRYIKIFTALSKEEIDALTAEHEAAPHLRVLQKC 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDEVS 347
           +A E+T MVH  E+   A  A+   F  +                 + +P   IS+D ++
Sbjct: 300 LAKEVTIMVHSEEDYNAAVDASNILFGNATSDALKKLDENTLLAVFEGVPQFEISRDALA 359

Query: 348 RGMGLLTLIV-KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+  + L V  A    S  E R+ ++   + +N   ++     I   D      + +  
Sbjct: 360 AGVKAVDLFVDNAAVFASKGEMRKLVQGGGVSLNKEKLAAFDQVITTADLLDEKYLLVQR 419

Query: 407 GKKNHII 413
           GKKN+ +
Sbjct: 420 GKKNYYL 426


>gi|160891750|ref|ZP_02072753.1| hypothetical protein BACUNI_04206 [Bacteroides uniformis ATCC 8492]
 gi|156859157|gb|EDO52588.1| hypothetical protein BACUNI_04206 [Bacteroides uniformis ATCC 8492]
          Length = 430

 Score =  270 bits (690), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 152/427 (35%), Positives = 228/427 (53%), Gaps = 22/427 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG +H +    E   L ++  VTAYIG+D TA SLH GHL  +M+L   Q+ 
Sbjct: 2   NFVEELRWRGMLHDMMPGTEE--LLAKEQVTAYIGFDPTADSLHIGHLCSVMILRHFQRC 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD-ALM 125
           GHKP++L+GG T +IGDPS +   R ++  + +Q N+  +K   S F+ + +   + A +
Sbjct: 60  GHKPLALIGGATGMIGDPSGKSAERNLLTEETLQRNLAGMKAQLSKFLDFDSDAPNRAEL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQAYD 183
           +NN  W+ +  ++D  RE+G   +VN M++ +SV+ RL  E    LSF EF Y +LQ YD
Sbjct: 120 VNNYDWMKNFTFLDFAREVGKHITVNYMMAKDSVKKRLNGEARDGLSFTEFTYQLLQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ L +   C+LQMGGSDQWGNI  G +L  R    ++FALTSPL+T A G K GKT SG
Sbjct: 180 FLHLYETKGCKLQMGGSDQWGNITTGAELIRRTNGGEVFALTSPLITKADGGKFGKTESG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKKI 301
            IWL+   TSPY F+Q+W N+ D D   + K  T L   EID +         +   +K 
Sbjct: 240 NIWLDPRYTSPYKFYQFWLNVSDEDAKRYIKIFTALSKEEIDALTAEHDAAPHLRVLQKC 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDEVS 347
           +A E+T MVH  E+   A  A+   F  +                 + +P   IS+D ++
Sbjct: 300 LAKEVTIMVHSEEDYNAAVDASNILFGNATSDALKKLDEDTLLAVFEGVPQFEISRDALA 359

Query: 348 RGMGLLTLIV-KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+  + L V  A    S  E R+ ++   + +N   ++     I   D      + +  
Sbjct: 360 AGVKAVDLFVDNAAVFASKGEMRKLVQGGGVSLNKEKLAAFDQVITTADLLDEKYLLVQR 419

Query: 407 GKKNHII 413
           GKKN+ +
Sbjct: 420 GKKNYYL 426


>gi|269961889|ref|ZP_06176246.1| tyrosyl-tRNA synthetase [Vibrio harveyi 1DA3]
 gi|269833467|gb|EEZ87569.1| tyrosyl-tRNA synthetase [Vibrio harveyi 1DA3]
          Length = 418

 Score =  270 bits (690), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 153/400 (38%), Positives = 226/400 (56%), Gaps = 22/400 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I Q S+  ++  L S+   T Y G+D TA SLH GHL  L++L   Q  GH+ I
Sbjct: 7   LQARGLIAQASDLDQVQQLLSE-PQTLYCGFDPTAGSLHIGHLVPLIMLKRFQDAGHQAI 65

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+   R +   + +   ++ +       +     K   +M+NN  W
Sbjct: 66  ALIGGATGMIGDPSFKATERSLNSEETVAGWVQDLSNQIQQLMNNQVSKP-MIMVNNADW 124

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDFVELAKN 190
           +  I  ID  R++G  FSVN M+S ESV+ RL+R +Q +SF EF+Y +LQ+YDF EL + 
Sbjct: 125 VKQINVIDFFRDVGKHFSVNTMISRESVKQRLQRPDQGISFTEFSYALLQSYDFAELNRQ 184

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKE 250
           + CRLQ+GG+DQWGNI+ GIDL  R    ++F LT PL+T + GTK GKT  GA+WL+  
Sbjct: 185 HGCRLQIGGNDQWGNIVSGIDLTRRQNGEQVFGLTLPLITKSDGTKFGKTEGGAVWLDPS 244

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN---EAKKIIATEIT 307
            TSPY F+Q+W + +DADV  F +  T L   EI  + + Q KE     +A++I+A ++T
Sbjct: 245 KTSPYAFYQFWLSAEDADVYHFLRYYTFLSCDEIAAI-EAQDKESKGKPQAQRILAEQMT 303

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISK----------DEVSRGMGLLTLIV 357
             VHG E       A+ E    ++ S ++  +S+S+             S    L+ L+V
Sbjct: 304 RFVHGEE-----GLASAERITQALFSGNVQQLSLSELKQLELDGLPSMQSAEQDLVELLV 358

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
           ++G A S   AR  + +NAI +N   +  E   +    FD
Sbjct: 359 ESGLANSKRIARELIGNNAISVNGEKVDAENPSLNFPLFD 398


>gi|182439471|ref|YP_001827190.1| putative tyrosyl-tRNA synthetase [Streptomyces griseus subsp.
           griseus NBRC 13350]
 gi|326780134|ref|ZP_08239399.1| Tyrosyl-tRNA synthetase [Streptomyces cf. griseus XylebKG-1]
 gi|254783640|sp|B1W1W0|SYY_STRGG RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|178467987|dbj|BAG22507.1| putative tyrosyl-tRNA synthetase [Streptomyces griseus subsp.
           griseus NBRC 13350]
 gi|326660467|gb|EGE45313.1| Tyrosyl-tRNA synthetase [Streptomyces cf. griseus XylebKG-1]
          Length = 423

 Score =  270 bits (690), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 152/415 (36%), Positives = 233/415 (56%), Gaps = 13/415 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +D +  L  RG   Q ++   L    + G VT Y G+D TA+SLH GHL Q++ +  LQ+
Sbjct: 2   TDIVDELKWRGLFAQSTDEDALRKALADGPVTFYCGFDPTAASLHVGHLVQVLTMRRLQQ 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQE-IQENIEKIKGIFSSFIKYGTGKTDAL 124
            G KP++L+GG T  IGDP  R  + R +   E I   +++++G    F+ +  G   A 
Sbjct: 62  AGLKPLALVGGATGQIGDP--RPTAERTLNDPETIAAWVQRLRGQIEPFLTF-EGPNAAT 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M+NN  W   +  I+ LR+IG  F VN+ML+ +SV  RL+ ++ +S+ EF+Y +LQ  DF
Sbjct: 119 MVNNLDWTAGMSAIEFLRDIGKHFRVNKMLTKDSVARRLESQEGISYTEFSYQLLQGMDF 178

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLF-ALTSPLLTTASGTKMGKTLSG 243
           +EL + + C LQ GGSDQWGN+  GIDL  RL+   +  AL +PL+T A GTK GK+ SG
Sbjct: 179 LELYRRHGCTLQQGGSDQWGNLTAGIDLIHRLEPGAVVHALATPLMTKADGTKFGKSESG 238

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKI 301
           A+WL+ EMT+PY F+Q+W N+DD DV  + + L+     E+  + KL  +  +   A++ 
Sbjct: 239 AVWLDPEMTTPYAFYQFWLNVDDRDVSRYLRILSFKSREELAELEKLTEERPQARNAQRA 298

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMS-IHSQHMPTISISKDEVSRGM-----GLLTL 355
           +A E+TT+VHG E+      A+   F    +      T+S +  EV          L+ L
Sbjct: 299 LAEELTTLVHGGEQCAAVIAASKALFGQGDLAELDEATLSAALSEVPHATVAELGPLVDL 358

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
           +V+ G A S + ARR +K     +NN  + + ++     +      + L  GKKN
Sbjct: 359 LVEVGLAPSKSGARRTVKEGGAYVNNVKVVDGEVAPDAGELLHGRWLVLRRGKKN 413


>gi|306828225|ref|ZP_07461486.1| tyrosine--tRNA ligase [Streptococcus pyogenes ATCC 10782]
 gi|304429603|gb|EFM32651.1| tyrosine--tRNA ligase [Streptococcus pyogenes ATCC 10782]
          Length = 418

 Score =  270 bits (689), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 141/396 (35%), Positives = 221/396 (55%), Gaps = 17/396 (4%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG + Q ++ + L    ++G V+ Y GYD TA SLH GHL  ++    LQ  GHKP 
Sbjct: 7   LKARGLVFQTTDEQALVKALTEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAGHKPY 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+D  R +   + + E  +KIKG  S+F+ +  G   A ++NN  W
Sbjct: 67  ALVGGATGLIGDPSFKDAERSLQTKETVLEWSDKIKGQLSTFLDFENGDNKAELVNNYDW 126

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
              I +ID LR++G +F+VN M+S +SV+ R+  E  +S+ EF Y I+Q YDF EL   +
Sbjct: 127 FSQISFIDFLRDVGKYFTVNYMMSKDSVKKRI--ETGISYTEFAYQIMQGYDFYELNDKH 184

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
           +  LQ+GGSDQWGN+  G +L  +        +T PL+T ++G K GK+   A+WL+ + 
Sbjct: 185 NVTLQIGGSDQWGNMTAGTELLRKKADKTGHVMTVPLITDSTGKKFGKSEGNAVWLDADK 244

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATEITTM 309
           TSPY  +Q+W N+ D D V F K  T L + EI  +        +E  A+K +A E+ T+
Sbjct: 245 TSPYEMYQFWLNVMDDDAVRFLKIFTFLSLDEIAEIETQFNAARHERLAQKTLAREVVTL 304

Query: 310 VHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIVKA 359
           VHG E  ++A     + F  +I +           ++P   +  ++    + L+ ++V A
Sbjct: 305 VHGEEVYKQALNITEQLFAGNIKNLSANELKQGLSNVPNYHVQSED---SLNLVDMLVTA 361

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           G + S  +AR  +++ AI IN   + +   Q+   D
Sbjct: 362 GISPSKRQAREDVQNGAIYINGDRVQDLDYQLSNDD 397


>gi|70726193|ref|YP_253107.1| tyrosyl-tRNA synthetase [Staphylococcus haemolyticus JCSC1435]
 gi|97202120|sp|Q4L774|SYY_STAHJ RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|68446917|dbj|BAE04501.1| tyrosyl-tRNA synthetase [Staphylococcus haemolyticus JCSC1435]
          Length = 420

 Score =  270 bits (689), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 144/379 (37%), Positives = 219/379 (57%), Gaps = 20/379 (5%)

Query: 15  RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLM 74
           RG I+Q ++   ++ L ++  ++ Y G D TA SLH GHL   M L   Q+ GH+PI L+
Sbjct: 12  RGLIYQQTDESSIEELLNKEQISLYCGADPTADSLHIGHLLPFMTLRRFQEHGHRPIVLI 71

Query: 75  GGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCS 134
           GGGT +IGDPS + E R +    +++ N+E I        ++GT K  A+++NN+ WL  
Sbjct: 72  GGGTGMIGDPSGKSEERILQTEDQVEANVEGISAQMHKLFEFGTDKG-AILVNNKDWLSQ 130

Query: 135 IKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCR 194
           I  I  LR+ G    VN ML  +S++SRL  E  +S+ EF Y ILQA DF  L +  +C+
Sbjct: 131 ISLISFLRDYGKHVGVNYMLGKDSIQSRL--ENGISYTEFTYTILQAIDFGHLNRELNCK 188

Query: 195 LQMGGSDQWGNIICGIDLGERL-KTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTS 253
           LQ+GGSDQWGNI  GI+L  R+    + + LT PL+T + G K GK+ SGA+WL+ + TS
Sbjct: 189 LQVGGSDQWGNITSGIELMRRMYGQTEAYGLTIPLVTKSDGKKFGKSESGAVWLDADKTS 248

Query: 254 PYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKKIIATEITTMVH 311
           PY F+Q+W N  D DV+ F K  T L   EI+R+  +K Q   + EA+K +A  +T  +H
Sbjct: 249 PYEFYQFWINQSDDDVIKFLKYFTFLDKDEINRLEESKNQEPHLREAQKALAENVTEFIH 308

Query: 312 GREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIVKAGF 361
           G+E  + A   +   F   + S          + +P + +S +  +    ++ ++++ G 
Sbjct: 309 GKEALDDAIRISKALFSGDLKSLSGKELKEGFKDVPQVELSTETSN----IIDVLIETGI 364

Query: 362 ATSTNEARRHLKSNAIKIN 380
           ATS  +AR  + + AI IN
Sbjct: 365 ATSKRQAREDVNNGAIYIN 383


>gi|297516892|ref|ZP_06935278.1| tyrosyl-tRNA synthetase [Escherichia coli OP50]
          Length = 295

 Score =  270 bits (689), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 128/283 (45%), Positives = 181/283 (63%), Gaps = 1/283 (0%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 4   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +QE ++KI+   + F+ +  G+  A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDCGENSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDF 184
            NN  W  ++  +  LR+IG  FSVN+M++ E+V+ RL RE Q +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGNMDVLTFLRDIGKHFSVNQMINKEAVKQRLNREDQGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K Y   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 184 ACLNKQYGVVLQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM 287
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+ +
Sbjct: 244 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINAL 286


>gi|65322029|ref|ZP_00394988.1| COG0162: Tyrosyl-tRNA synthetase [Bacillus anthracis str. A2012]
          Length = 418

 Score =  270 bits (689), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 148/385 (38%), Positives = 222/385 (57%), Gaps = 19/385 (4%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L  L  RG I+Q ++   L+ L  +  V  Y G+D TA SLH GH+  +++L   Q  GH
Sbjct: 4   LQDLEFRGLINQQTDAEGLEQLLEKESVKLYCGFDPTADSLHIGHMLPVLMLRRFQLAGH 63

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           +PI+L+GGGT +IGDPS +   R +     +    E IK   S+F+++   +  A M NN
Sbjct: 64  QPIALVGGGTGMIGDPSGKKAERTLNTKDTVAYYTESIKNQLSNFLEFENVENPATMANN 123

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL ++  I  LR+IG  F +N ML+ ++V SRL  E  +SF EF+YMILQ+YDF+ L 
Sbjct: 124 YDWLGNLDVISFLRDIGKNFGLNYMLAKDTVASRL--ETGISFTEFSYMILQSYDFLNLY 181

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKT-PKLFALTSPLLTTASGTKMGKTLSGAIWL 247
           ++++CRLQ+GGSDQWGNI  G++L  + +   K F LT PL+T + GTK GKT  GAIWL
Sbjct: 182 QHHNCRLQIGGSDQWGNITAGLELIRKSEEDAKAFGLTIPLVTKSDGTKFGKTEGGAIWL 241

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATE 305
           + E T+PY F+Q+W N DD DVV + K  T L   EI  + K   +  E   A+K +  E
Sbjct: 242 DPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLSHEEILELEKQVAEAPEKRAAQKALGAE 301

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTL 355
           +T +VHG E  E+A   +   F  S+            + +P++  + ++      L+ L
Sbjct: 302 MTKLVHGEEALEQAIKISAALFSGSVAELTASEIEQGFKDVPSVERTAEDTV----LIDL 357

Query: 356 IVKAGFATSTNEARRHLKSNAIKIN 380
           +V++  + S  +AR  + + A  +N
Sbjct: 358 LVESKISPSKRQAREDVTNGAXYVN 382


>gi|170705583|ref|ZP_02896047.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. A0389]
 gi|170129708|gb|EDS98571.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. A0389]
          Length = 418

 Score =  270 bits (689), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 148/385 (38%), Positives = 223/385 (57%), Gaps = 19/385 (4%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L  L  RG I+Q ++   L+ L  +  V  Y G+D TA SLH GH+  +++L   Q  GH
Sbjct: 4   LQDLEFRGLINQQTDAEGLEQLLEKESVKLYCGFDPTADSLHIGHMLPVLMLRRFQLAGH 63

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           +PI+L+GGGT +IGDPS +   R +     +    E IK   S+F+++   +  A M N+
Sbjct: 64  QPIALVGGGTGMIGDPSGKKAERTLNTKDTVAYYTESIKNQLSNFLEFENVENPATMANS 123

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL ++  I  LR+IG  F +N ML+ ++V SRL  E  +SF EF+YMILQ+YDF+ L 
Sbjct: 124 YDWLGNLDVISFLRDIGKNFGLNYMLAKDTVASRL--ETGISFTEFSYMILQSYDFLNLY 181

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKT-PKLFALTSPLLTTASGTKMGKTLSGAIWL 247
           ++++CRLQ+GGSDQWGNI  G++L  + +   K F LT PL+T + GTK GKT  GAIWL
Sbjct: 182 QHHNCRLQIGGSDQWGNITAGLELIRKSEEDAKAFGLTIPLVTKSDGTKFGKTEGGAIWL 241

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATE 305
           + E T+PY F+Q+W N DD DVV + K  T L   EI  + K   +  E   A+K +  E
Sbjct: 242 DPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLSHEEILELEKQVAEAPEKRAAQKALGAE 301

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTL 355
           +T +VHG E  E+A   +   F  S+            + +P++  + ++      L+ L
Sbjct: 302 MTKLVHGEEALEQAIKISAALFSGSVAELTASEIEQGFKDVPSVERTAEDTV----LIDL 357

Query: 356 IVKAGFATSTNEARRHLKSNAIKIN 380
           +V++  + S  +AR  + + AI +N
Sbjct: 358 LVESKISPSKRQAREDVTNGAIYVN 382


>gi|306836020|ref|ZP_07469011.1| tyrosine--tRNA ligase [Corynebacterium accolens ATCC 49726]
 gi|304568109|gb|EFM43683.1| tyrosine--tRNA ligase [Corynebacterium accolens ATCC 49726]
          Length = 428

 Score =  269 bits (688), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 153/396 (38%), Positives = 229/396 (57%), Gaps = 21/396 (5%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           ++ +  L  RG I+Q ++   L    ++  ++ Y G+D T SSLHAGHL  L++L   Q+
Sbjct: 5   TNIIDELQWRGLINQSTDLEALK-EAAESPISLYCGFDPTGSSLHAGHLVPLIMLKRFQR 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQE-IQENIEKIKGIFSSFIKY---GTGKT 121
            GH+PI+L GG T +IGDP  RD   R M S+E I EN++ IK    +F+ +   G    
Sbjct: 64  FGHRPIALAGGATGMIGDP--RDVGERSMLSEEQIAENMQAIKDQLEAFVDFTEAGESAI 121

Query: 122 DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA 181
            A+M+NN  W   I  I+ LR+IG  FS+N ML  ++V+ RL+ +  +S+ EF+YM+LQA
Sbjct: 122 PAVMVNNADWTSQINVIEYLRDIGKNFSLNTMLDRDTVKRRLESD-GISYTEFSYMLLQA 180

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            DFV L K YDC LQ+GG DQWGNI+ G+DL  R+   K+  LT PL+T A G K GK+ 
Sbjct: 181 NDFVHLHKEYDCVLQIGGGDQWGNIVSGVDLNRRVNGAKVHGLTVPLVTDAEGNKFGKST 240

Query: 242 SGA-IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN--EA 298
            G  +WL+ ++T PY+++QY+ N  DA V+ + +  T L   EI  +A+   +E +  EA
Sbjct: 241 GGGKLWLDPQLTRPYSWYQYFINAGDAVVIDYLRWFTFLTQEEIAELARKVEEEPHKREA 300

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECF--------DMSIHSQHMPTISISKDEVSRGM 350
           ++++A E+TT+VHG +  E    A+   F        D +  S  +    I+  EV    
Sbjct: 301 QRVLAREMTTLVHGEQATEAVELASQALFGKAELQDLDEATLSSALQETEIA--EVGPEA 358

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISN 386
            +L L+V+AG   S   ARR +      +NN  I +
Sbjct: 359 TILDLLVEAGLEKSKGAARRTVGEGGAYVNNQRIED 394


>gi|224537287|ref|ZP_03677826.1| hypothetical protein BACCELL_02164 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224521108|gb|EEF90213.1| hypothetical protein BACCELL_02164 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 430

 Score =  269 bits (688), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 153/427 (35%), Positives = 229/427 (53%), Gaps = 22/427 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG +H +    E   L ++  VTAYIG+D TA SLH GHL  +M+L   Q+ 
Sbjct: 2   NFVEELRWRGMLHDMMPGTEE--LLAKEQVTAYIGFDPTADSLHIGHLCSVMILRHFQRC 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD-ALM 125
           GHKP++L+GG T +IGDPS +   R ++  + +Q N++ +K   S F+ + +   + A +
Sbjct: 60  GHKPMALIGGATGMIGDPSGKSAERNLLTEEILQRNLDGMKKQLSKFLDFESDAPNRAEL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQAYD 183
           +NN  W+ +  ++D  RE+G   +VN M++ +SV+ RL  E    LSF EF Y +LQ YD
Sbjct: 120 VNNYDWMKNFTFLDFAREVGKHITVNYMMAKDSVKKRLNGEARDGLSFTEFTYQLLQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ L +   C+LQMGGSDQWGNI  G +L  R    ++FALTSPL+T A G K GKT SG
Sbjct: 180 FLHLYETKGCKLQMGGSDQWGNITTGAELIRRTNGGEVFALTSPLITKADGGKFGKTESG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKKI 301
            IWL+   TSPY F+Q+W N+ DAD   + K  T+L   EI+ +         +   +K 
Sbjct: 240 NIWLDPRYTSPYKFYQFWLNVSDADAARYIKIFTSLSREEIEALTAEHETAPHLRVLQKR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDEVS 347
           +A E+T MVH  E+   A  A+   F  +                 + +P   +SKD VS
Sbjct: 300 LAKEVTIMVHSEEDYNAAVDASNILFGNATSDALKKLDEDTLLAVFEGVPQFEVSKDAVS 359

Query: 348 RGMGLLTLIV-KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+  + L    A    S  E R+ ++   + +N   +      I   D      + +  
Sbjct: 360 AGVKAVDLFTDNAAVFASKGEMRKLVQGGGVSLNKEKLEAFDQVITSADLLDEKYLLVQR 419

Query: 407 GKKNHII 413
           GKKN+ +
Sbjct: 420 GKKNYYL 426


>gi|225453040|ref|XP_002265238.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 483

 Score =  269 bits (688), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 160/433 (36%), Positives = 243/433 (56%), Gaps = 19/433 (4%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           +P  +S+ + IL +RG +  I++P  L    S   +  Y G+D TA SLH G+L  L++L
Sbjct: 52  IPLHRSNVIEILEQRGLVDSITSPI-LRASSSTQTLKVYCGFDPTAESLHLGNLLGLIVL 110

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT-- 118
            W ++ GHK ++L+GG T+ IGDPS +   R  +  + +++N   I    +S +   T  
Sbjct: 111 SWFRRCGHKAVALIGGATARIGDPSGKSLERPELNLEALEKNTIGITNTITSILNRSTTN 170

Query: 119 -GKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYM 177
            G    ++LNN  W      +D L+++G +  V  M++ ESV+ RL+ EQ +S+ EF Y 
Sbjct: 171 GGDDSFVVLNNYDWWKEFTLLDFLKKVGRYARVGTMMAKESVKKRLESEQGMSYTEFTYQ 230

Query: 178 ILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER-LKTPKLFALTSPLLTTASGTK 236
           +LQ YDF+ L +N    +Q GGSDQWGNI  G +L  + L+T   + LT PLL  + GTK
Sbjct: 231 LLQGYDFLYLFENEGVSVQFGGSDQWGNITAGTELIRKILQTDGAYGLTFPLLLKSDGTK 290

Query: 237 MGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM-AKLQGKEI 295
            GK+  GAIWL+  M SPY F+QY+ ++ DADVV F K LT L M EI  +  K++    
Sbjct: 291 FGKSEDGAIWLSPAMLSPYKFYQYFFSVPDADVVRFLKILTFLDMDEIMELEVKMRSPSY 350

Query: 296 --NEAKKIIATEITTMVHGRE---EAEKAATAAMECFDMSIH-------SQHMPTISISK 343
             N A++ +A E T  VHG+E   EA KA  A     +  +        ++ +P+ S+S 
Sbjct: 351 VPNTAQRRLAEEATRFVHGQEGLDEALKATEALRPGAETKLDWKTIEGIAKDVPSCSLSY 410

Query: 344 DEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
           DEV   + LL L +  G   S + ARR LK   + +NN+ I +E  +I+ +D      + 
Sbjct: 411 DEV-LNLSLLDLSISTGLLESKSAARRLLKQGGLYLNNNRIDSEAKRIEAEDIVDGKVLL 469

Query: 404 LSFGKKNHIICHL 416
           LS GKKN ++  +
Sbjct: 470 LSAGKKNKVVVRI 482


>gi|71902745|ref|YP_279548.1| tyrosyl-tRNA synthetase [Streptococcus pyogenes MGAS6180]
 gi|97202245|sp|Q48VR3|SYY_STRPM RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|71801840|gb|AAX71193.1| tyrosyl-tRNA synthetase [Streptococcus pyogenes MGAS6180]
          Length = 418

 Score =  269 bits (688), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 141/396 (35%), Positives = 221/396 (55%), Gaps = 17/396 (4%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG + Q ++ + L    ++G V+ Y GYD TA SLH GHL  ++    LQ  GHKP 
Sbjct: 7   LKARGLVFQTTDEQALVKALTEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAGHKPY 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+D  R +   + + E  +KIKG  S+F+ +  G   A ++NN  W
Sbjct: 67  ALVGGATGLIGDPSFKDAERSLQTKETVLEWSDKIKGQLSTFLDFENGDNKAELVNNYDW 126

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
              I +ID LR++G +F+VN M+S +SV+ R+  E  +S+ EF Y I+Q YDF EL   +
Sbjct: 127 FSQISFIDFLRDVGKYFTVNYMMSKDSVKKRI--ETGISYTEFAYQIMQGYDFYELNDKH 184

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
           +  LQ+GGSDQWGN+  G +L  +        +T PL+T ++G K GK+   A+WL+ + 
Sbjct: 185 NVTLQIGGSDQWGNMTAGTELLRKKADKTGHVMTVPLITDSTGKKFGKSEGNAVWLDADK 244

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATEITTM 309
           TSPY  +Q+W N+ D D V F K  T L + EI  +        +E  A+K +A E+ T+
Sbjct: 245 TSPYEMYQFWLNVMDDDAVRFLKIFTFLFLDEIAEIETQFNAARHERLAQKTLAREVVTL 304

Query: 310 VHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIVKA 359
           VHG E  ++A     + F  +I +           ++P   +  ++    + L+ ++V A
Sbjct: 305 VHGEEAYKQALNITEQLFAGNIKNLSANELKQGLSNVPNYHVQSED---SLNLVDMLVTA 361

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           G + S  +AR  +++ AI IN   + +   Q+   D
Sbjct: 362 GISPSKRQAREDVQNGAIYINGDRVQDLDYQLSNDD 397


>gi|300744032|ref|ZP_07073052.1| tyrosine--tRNA ligase [Rothia dentocariosa M567]
 gi|300380393|gb|EFJ76956.1| tyrosine--tRNA ligase [Rothia dentocariosa M567]
          Length = 434

 Score =  269 bits (688), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 150/396 (37%), Positives = 224/396 (56%), Gaps = 28/396 (7%)

Query: 15  RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLM 74
           RG +H  ++   L+   S   +T Y GYD TA+SLH GHL QL+++  LQ  GH P+ L+
Sbjct: 25  RGLVHVSTDEEALEKALSDEKLTFYTGYDPTAASLHLGHLVQLLVMRRLQLAGHYPLGLV 84

Query: 75  GGGTSIIGDPSFRDESRRMMRSQEIQEN-IEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
           GG T +IGDP  R  S R++ S+E+  + ++ ++     F+ +  G+  A M+NN  W  
Sbjct: 85  GGFTGLIGDP--RQTSERVLNSREVVADWVQSLRSQIERFLSF-EGENAARMVNNLDWGG 141

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDC 193
            +  ID LR+IG  F V  M+  E V  RL  E+ +S+ EF+Y ILQ  D++EL + Y C
Sbjct: 142 QLSAIDFLRDIGKHFRVGTMVKKEIVAKRLNSEEGISYTEFSYQILQGLDYLELNRQYGC 201

Query: 194 RLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTS 253
            LQ GGSDQWGN+  G +L  +++   + A+ +PL+T + GTK GK+   AIWLN EM S
Sbjct: 202 TLQTGGSDQWGNLTSGTELIRKVEGKTVHAIGTPLITNSDGTKFGKSEGNAIWLNPEMCS 261

Query: 254 PYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIATEITTMVH 311
           PY F+Q+W N  DADV+   K  T L  +EI         E    EA+K++A E+T +VH
Sbjct: 262 PYAFYQFWLNTADADVIDRLKVFTFLTRAEIGEYEHKVETEAYKREAQKLLAYEVTALVH 321

Query: 312 GREEAEKAATAAMECFD-----------MSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           G E  E+A  A+   F            +      +P++ +S D +     L+T + + G
Sbjct: 322 GVEPTEQAIAASEALFGKGDFASLDESTLQAVMDELPSVELSSDRLD----LITALTELG 377

Query: 361 FATSTNEARRHLKSNAIKIN-------NSIISNEKL 389
           FA+S +EARR LK     +N       +++IS+E+L
Sbjct: 378 FASSKSEARRILKEGGASVNGVKVQGEDALISSEQL 413


>gi|153832312|ref|ZP_01984979.1| tyrosyl-tRNA synthetase [Vibrio harveyi HY01]
 gi|148871623|gb|EDL70478.1| tyrosyl-tRNA synthetase [Vibrio harveyi HY01]
          Length = 418

 Score =  269 bits (688), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 154/400 (38%), Positives = 225/400 (56%), Gaps = 22/400 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I Q S+  ++  L S    T Y G+D TA SLH GHL  L++L   Q  GH+ I
Sbjct: 7   LQARGLIAQASDLDQVQQLLST-PQTLYCGFDPTAGSLHIGHLVPLIMLKRFQDAGHQAI 65

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+   R +   + +   ++ +       +     K   +M+NN  W
Sbjct: 66  ALIGGATGMIGDPSFKATERSLNSEETVTGWVQDLSNQIQQLMNKQVSKP-MIMVNNADW 124

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDFVELAKN 190
           +  I  ID  R++G  FSVN M+S ESV+ RL+R +Q +SF EF+Y +LQ+YDF EL + 
Sbjct: 125 VKQINVIDFFRDVGKHFSVNTMISRESVKQRLQRPDQGISFTEFSYALLQSYDFAELNRL 184

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKE 250
           Y CRLQ+GG+DQWGNI+ GIDL  R    ++F LT PL+T + GTK GKT  GA+WL+  
Sbjct: 185 YGCRLQIGGNDQWGNIVSGIDLTRRQNGEQVFGLTLPLITKSDGTKFGKTEGGAVWLDPS 244

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN---EAKKIIATEIT 307
            TSPY F+Q+W + +DADV  F +  T L   EI  + + Q KE     +A++I+A ++T
Sbjct: 245 KTSPYAFYQFWLSAEDADVYHFLRYYTFLSCDEIAAI-EAQDKESKGKPQAQRILAEQMT 303

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISK----------DEVSRGMGLLTLIV 357
             VHG E       A+ E    ++ S ++  +S+S+             S    L+ L+V
Sbjct: 304 RFVHGEE-----GLASAERITQALFSGNVQQLSLSELKQLELDGLPSMQSAEQDLVELLV 358

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
           ++G A S   AR  + +NAI +N   +  E   +    FD
Sbjct: 359 ESGLANSKRIARELIGNNAISVNGEKVDAENPSLNFPLFD 398


>gi|324998013|ref|ZP_08119125.1| tyrosyl-tRNA synthetase [Pseudonocardia sp. P1]
          Length = 426

 Score =  269 bits (688), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 154/434 (35%), Positives = 234/434 (53%), Gaps = 24/434 (5%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPREL-DILCSQGVVTAYIGYDLTASSLHAGHLTQLML 59
           M    +D L  L  RG I Q ++   L   L     +T Y G+D TA SLHAGHL  ++ 
Sbjct: 1   MGGVGTDILDELEWRGLIAQSTDRDALAKELAGDEPITLYAGFDPTAPSLHAGHLVPMLT 60

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQE-IQENIEKIKGIFSSFIKYGT 118
           L   Q+ GH+P+ L GG T +IGDP  RD   R +  +  + E    I+G    F+ +  
Sbjct: 61  LRRFQEAGHRPVILAGGATGMIGDP--RDVGERTLNDEATVAEWTGLIRGQLERFVTFDD 118

Query: 119 GKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMI 178
             T AL +NN  W      ++ LR++G  F VN ML+ E+V+ RL  E  +S+ EF+Y++
Sbjct: 119 SPTGALAVNNLDWTGQQTVLEFLRDLGKHFPVNTMLARETVKRRLAGE-GMSYTEFSYLL 177

Query: 179 LQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMG 238
           LQ+ D++ L +   CRLQ+GGSDQWGNI+ G+DL  R++   + A+T PL+T + G K G
Sbjct: 178 LQSQDYLHLYRELGCRLQIGGSDQWGNIVGGVDLIRRIEGASVHAMTLPLVTDSEGRKFG 237

Query: 239 KTLSGA-IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEI 295
           K+  G  IWL+ + TSPY ++QY+ N+ DADV+ + K LT L   EID +A        +
Sbjct: 238 KSTGGGNIWLDPDRTSPYAWYQYFVNVADADVIGYLKLLTFLDREEIDVLATELTDAPHL 297

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQ-----------HMPTISISKD 344
             A++ +ATE+TTMVHG E+  +  TA+   F  +  S+            +PT      
Sbjct: 298 RSAQRRLATELTTMVHGEEQTRQVTTASQALFGRADLSELDAGTLAAALAEVPTADTGGS 357

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           +      ++ L+V  G   S   ARR +K     +NN  +++E+   + +D  + G + +
Sbjct: 358 DT-----IVDLLVSTGLTDSRGAARRAVKEGGAYVNNVKVTDEEWVPRAEDALAGGWLVV 412

Query: 405 SFGKKNHIICHLCG 418
             GK+N     L G
Sbjct: 413 RRGKRNLAGARLAG 426


>gi|253732378|ref|ZP_04866543.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|253723900|gb|EES92629.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
          Length = 420

 Score =  269 bits (688), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 145/382 (37%), Positives = 219/382 (57%), Gaps = 20/382 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I+Q ++ + ++ L ++  VT Y G D TA SLH GHL   + L   Q+ GH+PI
Sbjct: 9   LKWRGLIYQQTDEQGIEDLLNKEQVTLYCGADPTADSLHIGHLLPFLTLRRFQEHGHRPI 68

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+GGGT +IGDPS + E R +   +++ +NIE I     +  ++GT    A+++NN  W
Sbjct: 69  VLIGGGTGMIGDPSGKSEERVLQTEEQVDKNIEGISKQMHNIFEFGTDHG-AVLVNNRDW 127

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L  I  I  LR+ G    VN ML  +S++SRL  E  +S+ EF Y ILQA DF  L +  
Sbjct: 128 LGQISLISFLRDYGKHVGVNYMLGKDSIQSRL--EHGISYTEFTYTILQAIDFGHLNREL 185

Query: 192 DCRLQMGGSDQWGNIICGIDLGERL-KTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKE 250
           +C++Q+GGSDQWGNI  GI+L  R+      + LT PL+T + G K GK+ SGA+WL+ E
Sbjct: 186 NCKIQVGGSDQWGNITSGIELMRRMYGQTDAYGLTIPLVTKSDGKKFGKSESGAVWLDAE 245

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKKIIATEITT 308
            TSPY F+Q+W N  D DV+ F K  T L   EIDR+  +K +   + EA+K +A E+T 
Sbjct: 246 KTSPYEFYQFWINQSDEDVIKFLKYFTFLGKEEIDRLEQSKNEAPHLREAQKTLAEEVTK 305

Query: 309 MVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIVK 358
            +HG +    A   +   F   + S          + +P +++S D  +    ++ ++++
Sbjct: 306 FIHGEDALNDAIRISQALFSGDLKSLSAKELKDGFKDVPQVTLSNDTTN----IVEVLIE 361

Query: 359 AGFATSTNEARRHLKSNAIKIN 380
            G + S  +AR  + + AI IN
Sbjct: 362 TGISPSKRQAREDVNNGAIYIN 383


>gi|57652027|ref|YP_186612.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus COL]
 gi|81694288|sp|Q5HF45|SYY_STAAC RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|57286213|gb|AAW38307.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus COL]
          Length = 420

 Score =  269 bits (688), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 145/382 (37%), Positives = 219/382 (57%), Gaps = 20/382 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I+Q ++ + ++ L ++  VT Y G D TA SLH GHL   + L   Q+ GH+PI
Sbjct: 9   LKWRGLIYQQTDEQGIEDLLNKEQVTLYCGADPTADSLHIGHLLPFLTLRRFQEHGHRPI 68

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+GGGT +IGDPS + E R +   +++ +NIE I     +  ++GT    A+++NN  W
Sbjct: 69  VLIGGGTGMIGDPSGKSEERVLQTEEQVDKNIEGISKQIHNIFEFGTDHG-AVLVNNRDW 127

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L  I  I  LR+ G    VN ML  +S++SRL  E  +S+ EF Y ILQA DF  L +  
Sbjct: 128 LGQISLISFLRDYGKHVGVNYMLGKDSIQSRL--EHGISYTEFTYTILQAIDFGHLNREL 185

Query: 192 DCRLQMGGSDQWGNIICGIDLGERL-KTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKE 250
           +C++Q+GGSDQWGNI  GI+L  R+      + LT PL+T + G K GK+ SGA+WL+ E
Sbjct: 186 NCKIQVGGSDQWGNITSGIELMRRMYGQTDAYGLTIPLVTKSDGKKFGKSESGAVWLDAE 245

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKKIIATEITT 308
            TSPY F+Q+W N  D DV+ F K  T L   EIDR+  +K +   + EA+K +A E+T 
Sbjct: 246 KTSPYEFYQFWINQSDEDVIKFLKYFTFLGKEEIDRLEQSKNEAPHLREAQKTLAEEVTK 305

Query: 309 MVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIVK 358
            +HG +    A   +   F   + S          + +P +++S D  +    ++ ++++
Sbjct: 306 FIHGEDALNDAIRISQALFSGDLKSLSAKELKDGFKDVPQVTLSNDTTN----IVEVLIE 361

Query: 359 AGFATSTNEARRHLKSNAIKIN 380
            G + S  +AR  + + AI IN
Sbjct: 362 TGISPSKRQAREDVNNGAIYIN 383


>gi|30022732|ref|NP_834363.1| tyrosyl-tRNA synthetase [Bacillus cereus ATCC 14579]
 gi|81433417|sp|Q817A2|SYY1_BACCR RecName: Full=Tyrosyl-tRNA synthetase 1; AltName:
           Full=Tyrosine--tRNA ligase 1; Short=TyrRS 1
 gi|29898291|gb|AAP11564.1| Tyrosyl-tRNA synthetase [Bacillus cereus ATCC 14579]
          Length = 418

 Score =  269 bits (688), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 148/385 (38%), Positives = 221/385 (57%), Gaps = 19/385 (4%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L  L  RG I+Q ++    + L  +  V  Y G+D TA SLH GH+  +++L   Q  GH
Sbjct: 4   LQDLEFRGLINQQTDDEGFEQLLEKESVKLYCGFDPTADSLHIGHMYPVLMLRRFQLAGH 63

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           +PI+L+GGGT +IGDPS +   R +     +    E IK   S+F+++      A M NN
Sbjct: 64  QPIALVGGGTGMIGDPSGKKAERTLNTKDTVAYYTESIKNQLSNFLEFENVDNPATMANN 123

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL ++  I  LR+IG  F +N ML+ ++V SRL  E  +SF EF+YMILQ+YDF+ L 
Sbjct: 124 YDWLGNLDVISFLRDIGKNFGLNYMLAKDTVASRL--ETGISFTEFSYMILQSYDFLNLY 181

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERL-KTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
           +++ CRLQ+GGSDQWGNI  G++L  +  +  K F LT PL+T + GTK GKT  GAIWL
Sbjct: 182 QHHKCRLQIGGSDQWGNITAGLELIRKSEEDAKAFGLTIPLVTKSDGTKFGKTEGGAIWL 241

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATE 305
           + E T+PY F+Q+W N DD DVV + K  T L   EI  + K   +  E   A+K + +E
Sbjct: 242 DPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLSHEEILELEKQVAEAPEKRAAQKALGSE 301

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTL 355
           +T +VHG E  E+A   +   F  S+            + +P++  + ++      L+ L
Sbjct: 302 MTKLVHGEEALEQAIKISAALFSGSVAELTASEIEQGFKDVPSVERTAEDTV----LIDL 357

Query: 356 IVKAGFATSTNEARRHLKSNAIKIN 380
           +V++  + S  +AR  + + AI +N
Sbjct: 358 LVESKISPSKRQAREDVTNGAIYVN 382


>gi|15924719|ref|NP_372253.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu50]
 gi|15927306|ref|NP_374839.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus N315]
 gi|21283400|ref|NP_646488.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MW2]
 gi|49483969|ref|YP_041193.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|49486553|ref|YP_043774.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|82751316|ref|YP_417057.1| tyrosyl-tRNA synthetase [Staphylococcus aureus RF122]
 gi|87162035|ref|YP_494369.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|88195539|ref|YP_500345.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus NCTC
           8325]
 gi|148268207|ref|YP_001247150.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH9]
 gi|150394275|ref|YP_001316950.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH1]
 gi|151221834|ref|YP_001332656.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           Newman]
 gi|156980046|ref|YP_001442305.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu3]
 gi|161509944|ref|YP_001575603.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|221142363|ref|ZP_03566856.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           JKD6009]
 gi|253315098|ref|ZP_04838311.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           CF-Marseille]
 gi|255006514|ref|ZP_05145115.2| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Mu50-omega]
 gi|257425842|ref|ZP_05602266.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257428508|ref|ZP_05604906.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257431142|ref|ZP_05607519.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257433824|ref|ZP_05610182.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus E1410]
 gi|257436741|ref|ZP_05612785.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M876]
 gi|257794112|ref|ZP_05643091.1| tyrosyl-tRNA synthetase [Staphylococcus aureus A9781]
 gi|258415816|ref|ZP_05682087.1| tyrosyl-tRNA synthetase [Staphylococcus aureus A9763]
 gi|258420645|ref|ZP_05683584.1| tyrosyl-tRNA synthetase [Staphylococcus aureus A9719]
 gi|258438295|ref|ZP_05689579.1| tyrosyl-tRNA synthetase [Staphylococcus aureus A9299]
 gi|258443753|ref|ZP_05692092.1| tyrosyl-tRNA synthetase [Staphylococcus aureus A8115]
 gi|258445964|ref|ZP_05694140.1| tyrosyl-tRNA synthetase [Staphylococcus aureus A6300]
 gi|258448309|ref|ZP_05696436.1| tyrosyl-tRNA synthetase [Staphylococcus aureus A6224]
 gi|258454164|ref|ZP_05702135.1| tyrosyl-tRNA synthetase [Staphylococcus aureus A5937]
 gi|262049041|ref|ZP_06021919.1| tyrosyl-tRNA synthetase [Staphylococcus aureus D30]
 gi|262051808|ref|ZP_06024025.1| tyrosyl-tRNA synthetase [Staphylococcus aureus 930918-3]
 gi|269203367|ref|YP_003282636.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ED98]
 gi|282893223|ref|ZP_06301457.1| tyrosyl-tRNA synthetase [Staphylococcus aureus A8117]
 gi|282904298|ref|ZP_06312186.1| tyrosine--tRNA ligase [Staphylococcus aureus subsp. aureus C160]
 gi|282906123|ref|ZP_06313978.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282909039|ref|ZP_06316857.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282911354|ref|ZP_06319156.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282914523|ref|ZP_06322309.1| tyrosine--tRNA ligase [Staphylococcus aureus subsp. aureus M899]
 gi|282916989|ref|ZP_06324747.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus D139]
 gi|282919491|ref|ZP_06327226.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C427]
 gi|282924419|ref|ZP_06332092.1| tyrosyl-tRNA synthetase [Staphylococcus aureus A9765]
 gi|282924869|ref|ZP_06332535.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C101]
 gi|283770807|ref|ZP_06343699.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus H19]
 gi|283958478|ref|ZP_06375929.1| tyrosine--tRNA ligase [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|284024775|ref|ZP_06379173.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 132]
 gi|293503601|ref|ZP_06667448.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           58-424]
 gi|293510617|ref|ZP_06669322.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M809]
 gi|293537158|ref|ZP_06671838.1| tyrosine--tRNA ligase [Staphylococcus aureus subsp. aureus M1015]
 gi|294849890|ref|ZP_06790629.1| tyrosyl-tRNA synthetase [Staphylococcus aureus A9754]
 gi|295406039|ref|ZP_06815847.1| tyrosyl-tRNA synthetase [Staphylococcus aureus A8819]
 gi|295428298|ref|ZP_06820927.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|296276633|ref|ZP_06859140.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MR1]
 gi|297207559|ref|ZP_06923994.1| tyrosine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|297245035|ref|ZP_06928912.1| tyrosyl-tRNA synthetase [Staphylococcus aureus A8796]
 gi|297590739|ref|ZP_06949377.1| tyrosine--tRNA ligase [Staphylococcus aureus subsp. aureus MN8]
 gi|300911640|ref|ZP_07129084.1| tyrosine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH70]
 gi|304380679|ref|ZP_07363350.1| tyrosine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|81649151|sp|Q6G8J9|SYY_STAAS RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|81650917|sp|Q6GFX9|SYY_STAAR RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|81704346|sp|Q7A0M7|SYY_STAAW RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|81705530|sp|Q7A537|SYY_STAAN RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|81781424|sp|Q99TD5|SYY_STAAM RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|97202012|sp|Q2FG09|SYY_STAA3 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|97202017|sp|Q2YTG1|SYY_STAAB RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|123407035|sp|Q2FXJ5|SYY_STAA8 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|189029772|sp|A7X3G2|SYY_STAA1 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|189029773|sp|A6U2J5|SYY_STAA2 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|189029774|sp|A5ITQ1|SYY_STAA9 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|189029775|sp|A6QHR2|SYY_STAAE RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|189029776|sp|A8Z2P6|SYY_STAAT RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|16975033|pdb|1JII|A Chain A, Crystal Structure Of S. Aureus Tyrrs In Complex With Sb-
           219383
 gi|16975034|pdb|1JIJ|A Chain A, Crystal Structure Of S. Aureus Tyrrs In Complex With Sb-
           239629
 gi|16975035|pdb|1JIK|A Chain A, Crystal Structure Of S. Aureus Tyrrs In Complex With Sb-
           243545
 gi|16975036|pdb|1JIL|A Chain A, Crystal Structure Of S. Aureus Tyrrs In Complex With
           Sb284485
 gi|13701524|dbj|BAB42818.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus N315]
 gi|14247501|dbj|BAB57891.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu50]
 gi|21204840|dbj|BAB95536.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MW2]
 gi|49242098|emb|CAG40797.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|49244996|emb|CAG43457.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|82656847|emb|CAI81276.1| tyrosyl-tRNA synthetase [Staphylococcus aureus RF122]
 gi|87128009|gb|ABD22523.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|87203097|gb|ABD30907.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus NCTC
           8325]
 gi|147741276|gb|ABQ49574.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH9]
 gi|149946727|gb|ABR52663.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH1]
 gi|150374634|dbj|BAF67894.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           Newman]
 gi|156722181|dbj|BAF78598.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu3]
 gi|160368753|gb|ABX29724.1| tyrosine--tRNA ligase [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|257271536|gb|EEV03682.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257275349|gb|EEV06836.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257278090|gb|EEV08738.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257281917|gb|EEV12054.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus E1410]
 gi|257284092|gb|EEV14215.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M876]
 gi|257788084|gb|EEV26424.1| tyrosyl-tRNA synthetase [Staphylococcus aureus A9781]
 gi|257839409|gb|EEV63882.1| tyrosyl-tRNA synthetase [Staphylococcus aureus A9763]
 gi|257843249|gb|EEV67659.1| tyrosyl-tRNA synthetase [Staphylococcus aureus A9719]
 gi|257848339|gb|EEV72330.1| tyrosyl-tRNA synthetase [Staphylococcus aureus A9299]
 gi|257851159|gb|EEV75102.1| tyrosyl-tRNA synthetase [Staphylococcus aureus A8115]
 gi|257855206|gb|EEV78145.1| tyrosyl-tRNA synthetase [Staphylococcus aureus A6300]
 gi|257858548|gb|EEV81424.1| tyrosyl-tRNA synthetase [Staphylococcus aureus A6224]
 gi|257863616|gb|EEV86373.1| tyrosyl-tRNA synthetase [Staphylococcus aureus A5937]
 gi|259160302|gb|EEW45329.1| tyrosyl-tRNA synthetase [Staphylococcus aureus 930918-3]
 gi|259162858|gb|EEW47422.1| tyrosyl-tRNA synthetase [Staphylococcus aureus D30]
 gi|262075657|gb|ACY11630.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ED98]
 gi|269941207|emb|CBI49595.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus TW20]
 gi|282313235|gb|EFB43631.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C101]
 gi|282317301|gb|EFB47675.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C427]
 gi|282319476|gb|EFB49828.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus D139]
 gi|282321704|gb|EFB52029.1| tyrosine--tRNA ligase [Staphylococcus aureus subsp. aureus M899]
 gi|282325049|gb|EFB55359.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282327303|gb|EFB57598.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282331415|gb|EFB60929.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282592920|gb|EFB97923.1| tyrosyl-tRNA synthetase [Staphylococcus aureus A9765]
 gi|282595916|gb|EFC00880.1| tyrosine--tRNA ligase [Staphylococcus aureus subsp. aureus C160]
 gi|282764541|gb|EFC04667.1| tyrosyl-tRNA synthetase [Staphylococcus aureus A8117]
 gi|283460954|gb|EFC08044.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus H19]
 gi|283470994|emb|CAQ50205.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ST398]
 gi|283790627|gb|EFC29444.1| tyrosine--tRNA ligase [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|285817411|gb|ADC37898.1| Tyrosyl-tRNA synthetase [Staphylococcus aureus 04-02981]
 gi|290920003|gb|EFD97071.1| tyrosine--tRNA ligase [Staphylococcus aureus subsp. aureus M1015]
 gi|291095267|gb|EFE25532.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           58-424]
 gi|291466508|gb|EFF09029.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M809]
 gi|294823229|gb|EFG39659.1| tyrosyl-tRNA synthetase [Staphylococcus aureus A9754]
 gi|294969036|gb|EFG45057.1| tyrosyl-tRNA synthetase [Staphylococcus aureus A8819]
 gi|295127698|gb|EFG57335.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|296887576|gb|EFH26474.1| tyrosine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|297178115|gb|EFH37363.1| tyrosyl-tRNA synthetase [Staphylococcus aureus A8796]
 gi|297575625|gb|EFH94341.1| tyrosine--tRNA ligase [Staphylococcus aureus subsp. aureus MN8]
 gi|300887061|gb|EFK82262.1| tyrosine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH70]
 gi|302333393|gb|ADL23586.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           JKD6159]
 gi|302751555|gb|ADL65732.1| tyrosyl-tRNA synthetase, TyrS [Staphylococcus aureus subsp. aureus
           str. JKD6008]
 gi|304340786|gb|EFM06715.1| tyrosine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|312437815|gb|ADQ76886.1| tyrosine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH60]
 gi|312830107|emb|CBX34949.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ECT-R
           2]
 gi|315130634|gb|EFT86620.1| tyrosine--tRNA ligase [Staphylococcus aureus subsp. aureus CGS03]
 gi|315195633|gb|EFU26020.1| tyrosine--tRNA ligase [Staphylococcus aureus subsp. aureus CGS00]
 gi|315197197|gb|EFU27536.1| tyrosine--tRNA ligase [Staphylococcus aureus subsp. aureus CGS01]
 gi|320141672|gb|EFW33507.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MRSA131]
 gi|320143826|gb|EFW35599.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MRSA177]
 gi|323440726|gb|EGA98435.1| tyrosyl-tRNA synthetase [Staphylococcus aureus O11]
 gi|323442966|gb|EGB00588.1| tyrosyl-tRNA synthetase [Staphylococcus aureus O46]
 gi|329314402|gb|AEB88815.1| Tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus T0131]
 gi|329726966|gb|EGG63423.1| tyrosine--tRNA ligase [Staphylococcus aureus subsp. aureus 21189]
 gi|329727191|gb|EGG63647.1| tyrosine--tRNA ligase [Staphylococcus aureus subsp. aureus 21172]
 gi|329733062|gb|EGG69399.1| tyrosine--tRNA ligase [Staphylococcus aureus subsp. aureus 21193]
          Length = 420

 Score =  269 bits (688), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 145/382 (37%), Positives = 219/382 (57%), Gaps = 20/382 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I+Q ++ + ++ L ++  VT Y G D TA SLH GHL   + L   Q+ GH+PI
Sbjct: 9   LKWRGLIYQQTDEQGIEDLLNKEQVTLYCGADPTADSLHIGHLLPFLTLRRFQEHGHRPI 68

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+GGGT +IGDPS + E R +   +++ +NIE I     +  ++GT    A+++NN  W
Sbjct: 69  VLIGGGTGMIGDPSGKSEERVLQTEEQVDKNIEGISKQMHNIFEFGTDHG-AVLVNNRDW 127

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L  I  I  LR+ G    VN ML  +S++SRL  E  +S+ EF Y ILQA DF  L +  
Sbjct: 128 LGQISLISFLRDYGKHVGVNYMLGKDSIQSRL--EHGISYTEFTYTILQAIDFGHLNREL 185

Query: 192 DCRLQMGGSDQWGNIICGIDLGERL-KTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKE 250
           +C++Q+GGSDQWGNI  GI+L  R+      + LT PL+T + G K GK+ SGA+WL+ E
Sbjct: 186 NCKIQVGGSDQWGNITSGIELMRRMYGQTDAYGLTIPLVTKSDGKKFGKSESGAVWLDAE 245

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKKIIATEITT 308
            TSPY F+Q+W N  D DV+ F K  T L   EIDR+  +K +   + EA+K +A E+T 
Sbjct: 246 KTSPYEFYQFWINQSDEDVIKFLKYFTFLGKEEIDRLEQSKNEAPHLREAQKTLAEEVTK 305

Query: 309 MVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIVK 358
            +HG +    A   +   F   + S          + +P +++S D  +    ++ ++++
Sbjct: 306 FIHGEDALNDAIRISQALFSGDLKSLSAKELKDGFKDVPQVTLSNDTTN----IVEVLIE 361

Query: 359 AGFATSTNEARRHLKSNAIKIN 380
            G + S  +AR  + + AI IN
Sbjct: 362 TGISPSKRQAREDVNNGAIYIN 383


>gi|254284209|ref|ZP_04959177.1| tyrosyl-tRNA synthetase [gamma proteobacterium NOR51-B]
 gi|219680412|gb|EED36761.1| tyrosyl-tRNA synthetase [gamma proteobacterium NOR51-B]
          Length = 430

 Score =  269 bits (688), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 157/395 (39%), Positives = 217/395 (54%), Gaps = 27/395 (6%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S  L  L +RG I QI+   +L      G  T Y G+D TA SLH G L  L+ L   Q 
Sbjct: 3   SALLEDLRDRGLIFQIAGEEQLPDWLDGGPRTLYCGFDPTADSLHIGSLVPLLTLRRFQL 62

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   Q +    EKI+   S F+ +  G   A +
Sbjct: 63  AGHKPLALVGGATGLIGDPSFKAAERQLNTPQVVAGWTEKIREQVSRFVDF-EGANAAEV 121

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDF 184
           +NN  W  ++  +  LR+IG  FS+N M+  ESV+ RL+RE + +SF EF YMILQ++DF
Sbjct: 122 VNNLDWTGNVDVLSFLRDIGKHFSINAMVQKESVKQRLEREGEGISFTEFTYMILQSFDF 181

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
            EL + YDC LQ+GGSDQWGNI  GIDL  R    ++F +T PL+T A GTK GKT SG 
Sbjct: 182 SELYQRYDCTLQIGGSDQWGNITGGIDLTRRRFGGQVFGMTLPLVTKADGTKFGKTESGT 241

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM----AKLQGKEINEAKK 300
           IWL+ + TSPY F+Q+W N  DADV  F +  T L + EI  +    ++ QG+   E + 
Sbjct: 242 IWLDPDRTSPYAFYQFWLNTADADVYRFLRYFTFLSVEEIAAIESADSERQGRP--EGQG 299

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLT------ 354
           I+A ++T +VHG      A   A      ++ S  M  +S    E  R  GL +      
Sbjct: 300 ILAEQVTALVHG-----DAGLTAATRITGALFSGEMTALSADDFEQLRLDGLPSSEITAA 354

Query: 355 --------LIVKAGFATSTNEARRHLKSNAIKINN 381
                   L+ +AG   S  + +  L   A+ IN 
Sbjct: 355 AMPPTLTQLLTEAGVVASGKQVKDALGRGAVLING 389


>gi|300787884|ref|YP_003768175.1| tyrosyl-tRNA synthetase [Amycolatopsis mediterranei U32]
 gi|299797398|gb|ADJ47773.1| tyrosyl-tRNA synthetase [Amycolatopsis mediterranei U32]
          Length = 426

 Score =  269 bits (688), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 157/427 (36%), Positives = 238/427 (55%), Gaps = 21/427 (4%)

Query: 8   FLSILSERGFIHQISN----PRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
            L  LS RG I Q ++     RELD    QG VT Y G+D TA SLHAG+L  L++L   
Sbjct: 5   ILDELSWRGLIAQSTDIDALRRELD--QDQGPVTLYCGFDPTAPSLHAGNLVPLLMLKRF 62

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI-QENIEKIKGIFSSFIKYGTGKTD 122
           Q+ GH+PI L GG T +IGDP  RD   R + + ++  E   +I+G    F+ +    T 
Sbjct: 63  QRAGHRPIVLAGGATGMIGDP--RDTGERTLNTLDVVAEWAGRIRGQLERFVDFDDSATG 120

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
           A++ NN  W      ++ LR++G  FS+N ML+ E+V+ RL+ +  +S+ EF+Y++LQ+ 
Sbjct: 121 AIVENNLNWTGQQTALEFLRDVGKHFSINVMLNRETVKRRLEGD-GMSYTEFSYLLLQSQ 179

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           D+++L + Y CRLQ+GGSDQWGN++ G+DL  R     + ALT+PL+T A G K GK+  
Sbjct: 180 DYLQLHRQYGCRLQVGGSDQWGNLVGGVDLIRRTDGAAVHALTAPLVTDAEGRKFGKSTG 239

Query: 243 GA-IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAK 299
           G  +WL+ EMTSPY ++QY+ N+ DADVV + +  T L   EI  +A+   Q   +  A+
Sbjct: 240 GGNLWLDPEMTSPYAWYQYFVNVGDADVVRYLRMFTFLDQEEIAALAEDTEQRPHLRAAQ 299

Query: 300 KIIATEITTMVHGREEAEKAATAAMECF------DMSIHSQHMPTISISKDEVSRGM--G 351
           K +A E TT+VHG E+  +   A+   F      D+   +       +   +V  G    
Sbjct: 300 KRLAEEFTTLVHGEEQTRQVINASQALFGRGELGDLDERTLDAAMAEVPNGKVDPGAEPT 359

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           ++ L++  G   S   ARR LK     +NN  I++E+ +   +D      + +  GK+N 
Sbjct: 360 IVDLLLAGGLVDSKGAARRTLKEGGAYVNNVKIADEEWKPSREDALHGKWLVVRKGKRNV 419

Query: 412 IICHLCG 418
               L G
Sbjct: 420 AGVALGG 426


>gi|167763943|ref|ZP_02436070.1| hypothetical protein BACSTE_02326 [Bacteroides stercoris ATCC
           43183]
 gi|167698059|gb|EDS14638.1| hypothetical protein BACSTE_02326 [Bacteroides stercoris ATCC
           43183]
          Length = 430

 Score =  269 bits (688), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 150/427 (35%), Positives = 229/427 (53%), Gaps = 22/427 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG +H +    E   L ++  VTAYIG+D TA SLH GHL  +M+L   Q+ 
Sbjct: 2   NFVEELKWRGMLHDMMPGTEE--LLAKEQVTAYIGFDPTADSLHIGHLCSVMILRHFQRC 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD-ALM 125
           GHKP++L+GG T +IGDPS +   R ++  + +Q N+  +K   S F+ + +   + A +
Sbjct: 60  GHKPLALIGGATGMIGDPSGKSAERNLLTEETLQRNMAGMKKQLSKFLDFDSDAPNRAEL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQAYD 183
           +NN  W+    ++D  RE+G   +VN M++ +SV+ RL  E    LSF EF Y +LQ YD
Sbjct: 120 VNNYDWMKDFSFLDFAREVGKHITVNYMMAKDSVKKRLNGEARDGLSFTEFTYQLLQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ L +   C+LQMGGSDQWGNI  G +L  R    ++FALTSPL+T A G K GKT SG
Sbjct: 180 FLHLYETKGCKLQMGGSDQWGNITTGAELIRRTNGGEVFALTSPLITKADGGKFGKTESG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKKI 301
            IWL+   TSPY F+Q+W N+ DAD   + K  T+L   EI+ +         +   +K 
Sbjct: 240 NIWLDPRYTSPYKFYQFWLNVSDADAARYIKIFTSLSREEIEALTAEHEAAPHLRVLQKR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDEVS 347
           +A E+T MVH  E+   A  A+   F  +                 + +P   +S+D ++
Sbjct: 300 LAKEVTIMVHSEEDYNAAVDASNILFGNATSEALKKLDEDTLLAVFEGVPQFEVSRDALA 359

Query: 348 RGMGLLTLIV-KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+  + L V  A    S  E R+ ++   + +N   ++     +   D      + +  
Sbjct: 360 AGVKAVDLFVDNAAVFASKGEMRKLVQGGGVSLNKEKLAAFDQVVTTADLLDDKYLLVQR 419

Query: 407 GKKNHII 413
           GKKN+ +
Sbjct: 420 GKKNYYL 426


>gi|118617300|ref|YP_905632.1| tyrosyl-tRNA synthetase [Mycobacterium ulcerans Agy99]
 gi|118569410|gb|ABL04161.1| tyrosyl-tRNA synthase, TyrS [Mycobacterium ulcerans Agy99]
          Length = 430

 Score =  269 bits (688), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 154/425 (36%), Positives = 234/425 (55%), Gaps = 18/425 (4%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQG---VVTAYIGYDLTASSLHAGHLTQL 57
           M +  S    IL E G+   I+   +LD L +      +T Y G+D TA+SLHAGHL  L
Sbjct: 1   MSSNSSGSAGILDELGWRGLIAQSTDLDALAADAQRPPLTVYAGFDPTAASLHAGHLVPL 60

Query: 58  MLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN-IEKIKGIFSSFIKY 116
           + L   Q+ GH+PI L GG T +IGDP  RD   R +   +   N  E+I+G    F+ +
Sbjct: 61  LALRRFQRAGHRPIVLAGGATGMIGDP--RDIGERSLNDADTVANWTERIRGQLERFVDF 118

Query: 117 GTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNY 176
               T A++ NN  W  ++  ++ LR++G  FSVN ML  +++R RL+ E  +S+ EF+Y
Sbjct: 119 DGSPTGAIVENNLEWTAAMSTVEFLRDVGKHFSVNVMLDRDTIRRRLEGE-GISYTEFSY 177

Query: 177 MILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTK 236
           M+LQA D+VEL + + C LQ+GGSDQWGNII G+ L  +     + ALT PL+T A GTK
Sbjct: 178 MLLQANDYVELHRRHGCTLQIGGSDQWGNIIAGVRLVRQKSGAAVHALTVPLVTAADGTK 237

Query: 237 MGK-TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI 295
            GK T  G++WL+ EMTSPY ++QY+ N  DADV+ + +  T L   E+  + +   +  
Sbjct: 238 FGKSTGGGSLWLDPEMTSPYAWYQYFVNTADADVIRYLRWFTFLVAEELTELEQATAERA 297

Query: 296 NE--AKKIIATEITTMVHGREEAEKAATAAMECF--------DMSIHSQHMPTISISKDE 345
           ++  A++ +A E+TT+VHG    E    A+   F        D +     +   SI++ E
Sbjct: 298 HQRAAQRRLAAELTTLVHGEAATEAVEHASRALFGHGELSRLDEATLGAALRETSIAELE 357

Query: 346 VSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLS 405
                G++ L+V  G + S   ARR +    + +NN  +  ++   +  DF     + L 
Sbjct: 358 PGTPDGIVDLLVATGLSASKGAARRTIGEGGVSVNNIRVETDEWVPQTSDFLHGRWLVLR 417

Query: 406 FGKKN 410
            GK+N
Sbjct: 418 RGKRN 422


>gi|306832581|ref|ZP_07465720.1| tyrosine--tRNA ligase [Streptococcus bovis ATCC 700338]
 gi|304425189|gb|EFM28316.1| tyrosine--tRNA ligase [Streptococcus bovis ATCC 700338]
          Length = 418

 Score =  269 bits (687), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 150/417 (35%), Positives = 227/417 (54%), Gaps = 21/417 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L ERG + Q ++   L    ++G V+ Y GYD TA SLH GHL  ++    LQ  GHKP 
Sbjct: 7   LKERGLVFQTTDEEALVKALTEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAGHKPY 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+D  R +   + +   + KI+   S F+ +  G   A+M+NN  W
Sbjct: 67  ALVGGATGLIGDPSFKDAERSLQTKETVDGWVTKIQNQLSRFLDFENGDNKAVMVNNYDW 126

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
             ++ +ID LR++G +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF EL   Y
Sbjct: 127 FGNVSFIDFLRDVGKYFTVNAMMSKESVKKRI--ETGISYTEFAYQIMQGYDFYELNDKY 184

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
           +  LQ+GGSDQWGN+  G +L  R        +T PL+T ++G K GK+   A+WL+ E 
Sbjct: 185 NVTLQIGGSDQWGNMTAGTELLRRKADKTGHVMTVPLITDSTGKKFGKSEGNAVWLDAEK 244

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATEITTM 309
           TSPY  +Q+W N+ D D V F K  T L + EI  + +      +E  A+KI+A E+ T+
Sbjct: 245 TSPYEMYQFWLNVMDDDAVRFLKIFTFLSLEEIAEIEEEFNAARHERLAQKILAREVVTL 304

Query: 310 VHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIVKA 359
           VHG    ++A     + F  +I S           ++P  ++  D       ++ ++V A
Sbjct: 305 VHGEAAYKQALKITEQLFAGNIKSLSAKELKQGLNNVPNYAVQAD---NNRNIVEILVAA 361

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN--IKLSFGKKNHIIC 414
             + S  +AR  +++ AI IN   I +  L   L D D   N    +  GKK + + 
Sbjct: 362 KISPSKRQAREDVQNGAIYINGERIQD--LDYTLSDDDKIDNELTVIRRGKKKYFVL 416


>gi|314936172|ref|ZP_07843519.1| tyrosine--tRNA ligase [Staphylococcus hominis subsp. hominis C80]
 gi|313654791|gb|EFS18536.1| tyrosine--tRNA ligase [Staphylococcus hominis subsp. hominis C80]
          Length = 420

 Score =  269 bits (687), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 144/382 (37%), Positives = 222/382 (58%), Gaps = 12/382 (3%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L  RG I+Q ++ + ++ L ++  VT Y G D TA SLH GHL   M L   Q+ G
Sbjct: 5   LLEELQWRGLIYQQTDEQGIEDLLNKEQVTLYCGADPTADSLHIGHLLPFMTLRRFQEHG 64

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+PI L+GGGT +IGDPS + E R +    ++ +N+E +        ++GT K  A+++N
Sbjct: 65  HRPIVLIGGGTGMIGDPSGKSEERVLQTEDQVAKNVEGLSAQMHKLFEFGTDKG-AVLVN 123

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  I  I  LR+ G    VN ML  +S++SRL  E  +S+ EF Y ILQA DF  L
Sbjct: 124 NRDWLSQISLISFLRDYGKHVGVNYMLGKDSIQSRL--ENGISYTEFTYTILQAIDFGHL 181

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERL-KTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
            +  +C++Q+GGSDQWGNI  GI+L  R+    + + LT PL+T + G K GK+ SGA+W
Sbjct: 182 NRELNCKIQVGGSDQWGNITSGIELMRRMYGQTEAYGLTIPLVTKSDGKKFGKSESGAVW 241

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKKIIAT 304
           L+ E T+PY F+Q+W N  D DV+ F K  T L   +I+R+  ++ +   + EA+K +A 
Sbjct: 242 LDAEKTTPYEFYQFWINQSDEDVIKFLKYFTFLSKEDINRLEQSRDEAPHLREAQKALAE 301

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI-----SISKDEVSRG-MGLLTLIVK 358
            +T  +HG+E  + A   +   F   + S  +  I      + + EVS+    ++ ++++
Sbjct: 302 NVTEFIHGKEALDDAIRISEALFKGDLKSLSIKDIKAGFKEVPQVEVSKATTNIIDVLIE 361

Query: 359 AGFATSTNEARRHLKSNAIKIN 380
           +G A+S  +AR  + + AI IN
Sbjct: 362 SGIASSKRQAREDVNNGAIYIN 383


>gi|282927858|ref|ZP_06335469.1| tyrosyl-tRNA synthetase [Staphylococcus aureus A10102]
 gi|282590368|gb|EFB95447.1| tyrosyl-tRNA synthetase [Staphylococcus aureus A10102]
          Length = 420

 Score =  269 bits (687), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 145/382 (37%), Positives = 219/382 (57%), Gaps = 20/382 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I+Q ++ + ++ L ++  VT Y G D TA SLH GHL   + L   Q+ GH+PI
Sbjct: 9   LKWRGLIYQQTDEQGIEDLLNKEQVTLYCGADPTADSLHIGHLLPFLTLRRFQEHGHRPI 68

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+GGGT +IGDPS + E R +   +++ +NIE I     +  ++GT    A+++NN  W
Sbjct: 69  VLIGGGTGMIGDPSGKSEERVLQTEEQVDKNIEGISKQMHNIFEFGTDHG-AVLVNNRDW 127

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L  I  I  LR+ G    VN ML  +S++SRL  E  +S+ EF Y ILQA DF  L +  
Sbjct: 128 LGQISLISFLRDYGKHVGVNYMLGKDSIQSRL--EHGISYTEFTYTILQAIDFGHLNREL 185

Query: 192 DCRLQMGGSDQWGNIICGIDLGERL-KTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKE 250
           +C++Q+GGSDQWGNI  GI+L  R+      + LT PL+T + G K GK+ SGA+WL+ E
Sbjct: 186 NCKIQVGGSDQWGNITSGIELMRRMYGQTDAYGLTIPLVTKSDGKKFGKSESGAVWLDAE 245

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKKIIATEITT 308
            TSPY F+Q+W N  D DV+ F K  T L   EIDR+  +K +   + EA+K +A E+T 
Sbjct: 246 KTSPYEFYQFWINQSDEDVIKFLKYFTFLGKEEIDRLEQSKNEAPHLREAQKTLAEEVTK 305

Query: 309 MVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIVK 358
            +HG +    A   +   F   + S          + +P +++S D  +    ++ ++++
Sbjct: 306 FIHGEDALNDAIRISQALFSGDLKSLSAKELKDGFKDVPQVTLSNDTTN----IVEVLIE 361

Query: 359 AGFATSTNEARRHLKSNAIKIN 380
            G + S  +AR  + + AI IN
Sbjct: 362 TGISPSKRQAREDVNNGAIYIN 383


>gi|258450877|ref|ZP_05698930.1| tyrosyl-tRNA synthetase [Staphylococcus aureus A5948]
 gi|257861413|gb|EEV84221.1| tyrosyl-tRNA synthetase [Staphylococcus aureus A5948]
          Length = 420

 Score =  269 bits (687), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 145/382 (37%), Positives = 219/382 (57%), Gaps = 20/382 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I+Q ++ + ++ L ++  VT Y G D TA SLH GHL   + L   Q+ GH+PI
Sbjct: 9   LKWRGLIYQQTDEQGIEDLLNKEQVTLYCGADPTADSLHIGHLLPFLTLRRFQEHGHRPI 68

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+GGGT +IGDPS + E R +   +++ +NIE I     +  ++GT    A+++NN  W
Sbjct: 69  VLIGGGTGMIGDPSGKSEERVLQTEEQVDKNIEGISKQMHNIFEFGTDHG-AVLVNNRDW 127

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L  I  I  LR+ G    VN ML  +S++SRL  E  +S+ EF Y ILQA DF  L +  
Sbjct: 128 LGQISLISFLRDYGKHVGVNYMLGKDSIQSRL--EHGISYTEFTYTILQAIDFGHLNREL 185

Query: 192 DCRLQMGGSDQWGNIICGIDLGERL-KTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKE 250
           +C++Q+GGSDQWGNI  GI+L  R+      + LT PL+T + G K GK+ SGA+WL+ E
Sbjct: 186 NCKIQVGGSDQWGNITSGIELMRRMYGQTDAYGLTIPLVTKSDGKKFGKSESGAVWLDAE 245

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKKIIATEITT 308
            TSPY F+Q+W N  D DV+ F K  T L   EIDR+  +K +   + EA+K +A E+T 
Sbjct: 246 KTSPYEFYQFWINQSDEDVIKFLKYFTFLGKEEIDRLEQSKNEAPHLREAQKTLAEEVTK 305

Query: 309 MVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIVK 358
            +HG +    A   +   F   + S          + +P +++S D  +    ++ ++++
Sbjct: 306 FIHGEDALNDAIRISQALFSGDLKSLSAKELKGGFKDVPQVTLSNDTTN----IVEVLIE 361

Query: 359 AGFATSTNEARRHLKSNAIKIN 380
            G + S  +AR  + + AI IN
Sbjct: 362 TGISPSKRQAREDVNNGAIYIN 383


>gi|314933882|ref|ZP_07841247.1| tyrosine--tRNA ligase [Staphylococcus caprae C87]
 gi|313654032|gb|EFS17789.1| tyrosine--tRNA ligase [Staphylococcus caprae C87]
          Length = 420

 Score =  269 bits (687), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 145/379 (38%), Positives = 217/379 (57%), Gaps = 20/379 (5%)

Query: 15  RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLM 74
           RG I+Q ++ + ++ L ++  VT Y G D TA SLH GHL   + L   Q+ GH+PI L+
Sbjct: 12  RGLIYQQTDEQGIEDLLNKEQVTLYCGADPTADSLHIGHLLPFLTLRRFQEHGHRPIVLI 71

Query: 75  GGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCS 134
           GGGT +IGDPS + E R +   ++++ N++ +        ++GT K  A+++NN+ WL  
Sbjct: 72  GGGTGMIGDPSGKSEERVLQTEEQVEANVQGLSKQMHRLFEFGTDKG-AVLVNNKDWLGQ 130

Query: 135 IKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCR 194
           I  I  LR+ G    VN ML  +S+++RL  E  +S+ EF Y ILQA DF  L +  +C+
Sbjct: 131 ISLISFLRDYGKHVGVNYMLGKDSIQTRL--EHGISYTEFTYTILQAIDFGHLNRELNCK 188

Query: 195 LQMGGSDQWGNIICGIDLGERL-KTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTS 253
           +Q+GGSDQWGNI  GI+L  R+    + F LT PL+T + G K GK+ SGA+WL+ E TS
Sbjct: 189 IQVGGSDQWGNITSGIELMRRMYGQTEAFGLTIPLVTKSDGKKFGKSESGAVWLDPEKTS 248

Query: 254 PYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKKIIATEITTMVH 311
           PY F+Q+W N  D DV+ F K  T L   EIDR+  +K +   + EA+K +A  +T  +H
Sbjct: 249 PYEFYQFWINQSDEDVIKFLKYFTFLDKEEIDRLEQSKEEAPHLREAQKALAENVTKFIH 308

Query: 312 GREEAEKAATAAMECFDMSIHSQ----------HMPTISISKDEVSRGMGLLTLIVKAGF 361
           G E    A   +   F   + S            +P +S+S    S    ++  +++ G 
Sbjct: 309 GEEALNDAIRISKALFSGDLKSLTGKELKEGFIDVPQVSLS----SETTNIIEALIETGI 364

Query: 362 ATSTNEARRHLKSNAIKIN 380
           ATS  +AR  + + AI IN
Sbjct: 365 ATSKRQAREDVNNGAIYIN 383


>gi|262191076|ref|ZP_06049283.1| tyrosyl-tRNA synthetase [Vibrio cholerae CT 5369-93]
 gi|262033052|gb|EEY51583.1| tyrosyl-tRNA synthetase [Vibrio cholerae CT 5369-93]
          Length = 426

 Score =  269 bits (687), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 160/422 (37%), Positives = 229/422 (54%), Gaps = 23/422 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG I Q S P E  +         Y G+D TA SLH GHL  L++L   Q  GH+ I
Sbjct: 10  LQQRGLIAQ-STPLEALVERFATPQVLYCGFDPTAGSLHIGHLVPLLMLKRFQNAGHQAI 68

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM-LNNET 130
           +L+GG T +IGDPSF+   R +  +Q +Q+ +  +    +  +   +     LM +NN  
Sbjct: 69  ALIGGATGMIGDPSFKANERVLNSAQTVQQWVSDLSQQITQLMTSQSENCALLMTVNNAD 128

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDFVELAK 189
           W+  I  ID  R++G  FSVN M++ ESV+ RL R +Q +SF EF+Y +LQ+YDF  L +
Sbjct: 129 WIGKINLIDFFRDVGKHFSVNTMINRESVKQRLARPDQGISFTEFSYSLLQSYDFAHLNR 188

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
              C LQ+GG+DQWGNI+ GIDL  RL   ++  LT PL+T + GTK GKT SGA+WL  
Sbjct: 189 ELGCALQIGGNDQWGNIVSGIDLTRRLNGAEVCGLTLPLITKSDGTKFGKTESGAVWLES 248

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEIT 307
             TSPY F+Q+W N DDADV  F    T L  +EI+  R A        +A++I+A  +T
Sbjct: 249 SKTSPYRFYQFWLNSDDADVYRFLAYYTFLSTAEIEEIRQADALRAGKPQAQQILAEHVT 308

Query: 308 TMVHGRE--EAEKAATAAMECFDMSIHS---------QHMPTISISKDEVSRGMGLLTLI 356
             VHG E   A +  T A+   D+S  S           +P ++ S+ +      LL  +
Sbjct: 309 RFVHGEEGLAAAQRITQALFSGDVSYLSLSELAQLELDGLPCVAASRSD-----SLLDFL 363

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           + +G A+S  +AR  L++ AI++N   +  E +      FD      L  GKK   +  L
Sbjct: 364 LTSGLASSKRQAREWLENGAIRVNGERVQQEGVLSGFALFDRY--YVLQRGKKQFALIKL 421

Query: 417 CG 418
            G
Sbjct: 422 EG 423


>gi|90020735|ref|YP_526562.1| tyrosyl-tRNA synthetase [Saccharophagus degradans 2-40]
 gi|89950335|gb|ABD80350.1| tyrosyl-tRNA synthetase [Saccharophagus degradans 2-40]
          Length = 434

 Score =  269 bits (687), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 157/397 (39%), Positives = 219/397 (55%), Gaps = 22/397 (5%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M    +  L+ L  RG I Q++   +L    S    T Y G+D TA SLH G L  L+ L
Sbjct: 1   MSGVDTGLLADLEARGLIAQMTGDDQLAEHLSTSR-TLYCGFDPTADSLHIGSLVPLLTL 59

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GHKP++L+GG T +IGDPSF+ + R++     +   ++K+K   S FI + +G+
Sbjct: 60  KRFQMAGHKPLALVGGATGLIGDPSFKAQERKLNTPDIVAGWVDKLKAQVSQFIDFDSGE 119

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQS-LSFLEFNYMIL 179
             A ++NN  W+ S+  +D LR++G  FS+N M+  ESV+ R+ RE + +SF EF YMIL
Sbjct: 120 NVAEVVNNLDWIGSVNVLDFLRDVGKHFSINNMIQKESVKQRIDREGAGISFTEFTYMIL 179

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK 239
           Q+YDF EL K  +C LQ+GGSDQWGNI  GIDL  R+ + + F LT PL+T + GTK GK
Sbjct: 180 QSYDFAELYKQNNCTLQIGGSDQWGNITGGIDLARRMYSGQTFGLTLPLVTKSDGTKFGK 239

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLP----MSEIDRMAKLQGKEI 295
           T SG IWL+   TSPY F+Q+W N  DADV  F +  T L            A  QG+  
Sbjct: 240 TESGTIWLDPSKTSPYAFYQFWLNSADADVYKFLRYFTFLTPKEIDDIEAADAAAQGRP- 298

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECF------DMS------IHSQHMPTISISK 343
            +A+ I+A E+T +VHG EE   AA     C       D+S      +    +P   +  
Sbjct: 299 -QAQGILAKEVTRLVHG-EEGLVAAERITACMFNGTLADLSETDLEQLKLDGLPASDLDV 356

Query: 344 DEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKIN 380
             +     L TL+   G A +  E +  L  NA+ IN
Sbjct: 357 GAIGD-TPLTTLLTDCGMAKAGREVKDALGRNAVLIN 392


>gi|329956463|ref|ZP_08297060.1| tyrosine--tRNA ligase [Bacteroides clarus YIT 12056]
 gi|328524360|gb|EGF51430.1| tyrosine--tRNA ligase [Bacteroides clarus YIT 12056]
          Length = 430

 Score =  269 bits (687), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 150/427 (35%), Positives = 229/427 (53%), Gaps = 22/427 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG +H +    E   L ++  VTAYIG+D TA SLH GHL  +M+L   Q+ 
Sbjct: 2   NFVEELKWRGMLHDMMPGTEE--LLAKEQVTAYIGFDPTADSLHIGHLCSVMILRHFQRC 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD-ALM 125
           GHKP++L+GG T +IGDPS +   R ++  + +Q N+  +K   S F+ + +   + A +
Sbjct: 60  GHKPLALIGGATGMIGDPSGKSAERNLLTEETLQRNMAGMKKQLSKFLDFESDAPNRAEL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQAYD 183
           +NN  W+    ++D  RE+G   +VN M++ +SV+ RL  E    LSF EF Y +LQ YD
Sbjct: 120 VNNYDWMKDFSFLDFAREVGKHITVNYMMAKDSVKKRLNGEARDGLSFTEFTYQLLQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ L +   C+LQMGGSDQWGNI  G +L  R    ++FALTSPL+T A G K GKT SG
Sbjct: 180 FLHLYETKGCKLQMGGSDQWGNITTGAELIRRTNGGEVFALTSPLITKADGGKFGKTESG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKKI 301
            IWL+   TSPY F+Q+W N+ DAD   + K  T+L   EI+ +         +   +K 
Sbjct: 240 NIWLDPRYTSPYKFYQFWLNVSDADAARYIKIFTSLTKEEIEALTAEHEAAPHLRVLQKR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDEVS 347
           +A E+T MVH  E+   A  A+   F  +                 + +P   +S+D ++
Sbjct: 300 LAKEVTIMVHSEEDYNAAVDASNILFGNATSEALKKLDEDTLLAVFEGVPQFEVSRDALA 359

Query: 348 RGMGLLTLIV-KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+  + L V  A    S  E R+ ++   + +N   ++     +   D      + +  
Sbjct: 360 AGVKAVDLFVDNAAVFASKGEMRKLVQGGGVSLNKEKLAAFDQVVTTADLLDDKYLLVQR 419

Query: 407 GKKNHII 413
           GKKN+ +
Sbjct: 420 GKKNYYL 426


>gi|260774198|ref|ZP_05883113.1| tyrosyl-tRNA synthetase [Vibrio metschnikovii CIP 69.14]
 gi|260611159|gb|EEX36363.1| tyrosyl-tRNA synthetase [Vibrio metschnikovii CIP 69.14]
          Length = 420

 Score =  269 bits (687), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 156/418 (37%), Positives = 228/418 (54%), Gaps = 13/418 (3%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           FL  L++RG + Q +   EL  L ++   T Y G+D TA SLH GHL  L++L   Q  G
Sbjct: 6   FLHELAQRGLMAQSTPIDELSELLNRPQ-TLYCGFDPTAGSLHIGHLVPLLMLKRFQDAG 64

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H  I+L+GG T +IGDPSF+   R +  S  +Q+ +  +       +     +   L +N
Sbjct: 65  HTAIALIGGATGMIGDPSFKAAERTLNPSTTVQQWVNDLAQQIDQVMTPHMTQP-LLCVN 123

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDFVE 186
           N  W+  I  ID  R+IG  FSVN M++ ESV+ RL R +Q +SF EF+Y +LQ++DF  
Sbjct: 124 NADWITKINVIDFFRDIGKHFSVNTMINRESVKQRLSRPDQGISFTEFSYSLLQSFDFAH 183

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + Y CRLQ+GG+DQWGNI+ GIDL  RL    +  LT PL+T + GTK GKT SGAIW
Sbjct: 184 LNQQYQCRLQIGGNDQWGNIVSGIDLTRRLNNQVVHGLTLPLITKSDGTKFGKTESGAIW 243

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN--EAKKIIAT 304
           L+   TSPY F+Q+W N DDADV  F +  T L +S+I+ + +         +A++++A 
Sbjct: 244 LDSNKTSPYAFYQFWLNTDDADVYRFLRYYTFLSLSDIETIEQQDKASTGKPQAQQVLAE 303

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTLIVK 358
           ++T  VHG E    A       F   ++       Q +    +   +      L+ L++ 
Sbjct: 304 QLTRFVHGEEGLLSAQRITQALFRGEMNQLSLAELQQLELDGLPCYQTDNTDSLIELMLV 363

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
              A+S  +AR  L + AI+IN   +  E+L  +   FD    I+   GKK   +  L
Sbjct: 364 TQLASSKRQAREWLANGAIRINGERVEQEQLSSQFALFDRYYVIQR--GKKQFALAKL 419


>gi|301166503|emb|CBW26079.1| putative tyrosyl-tRNA synthetase [Bacteriovorax marinus SJ]
          Length = 423

 Score =  269 bits (687), Expect = 8e-70,   Method: Compositional matrix adjust.
 Identities = 149/424 (35%), Positives = 232/424 (54%), Gaps = 19/424 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           F   L  RG I  +SN  EL+   ++G ++ Y GYD TA SL  G+L  ++     QK G
Sbjct: 3   FFDELKARGIIDALSNEEELEKKFNEGGMSFYCGYDPTARSLQLGNLFTIITCMRFQKAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKP  L+GG T +IGDPS + E R ++  + ++ENI+ I+     F+ +  G   A+++N
Sbjct: 63  HKPYMLVGGATGMIGDPSGKSEERNLLDMETLKENIDAIRKQLGLFVDFECGDNAAVLVN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W   + +++ LR IG  F VN ML+ +SV+SR++ +  +S  EF+Y +LQAYDFV L
Sbjct: 123 NADWWQGLGFLEFLRTIGKRFRVNEMLNKDSVKSRIESDSGISLTEFSYQVLQAYDFVTL 182

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            K ++  LQ+GGSDQWGN+  G DL  ++   +++ +T PL+T  +G K GK+   A++L
Sbjct: 183 NKLHNVSLQIGGSDQWGNMTAGTDLTRKMNQNQVYCMTMPLVTDQNGKKFGKSAGNAVFL 242

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE-----AKKII 302
           +  MTSPY  +Q+  N DDA + +  K  T L + EI   A+L  K  NE     A+K +
Sbjct: 243 DGSMTSPYKMYQFLLNQDDAIIDALLKYYTFLSLDEI---AELDSKTKNEPHLRLAQKSL 299

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGL 352
           A E+T +VHG+E  + A  A    F   I +          +  P++ +S + ++ G G+
Sbjct: 300 AQEVTKLVHGQEGLDAALRATQFFFGEKIENVSDADVASIFEDTPSVELSSEMLNEG-GV 358

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           + ++ +     S  E RR +    I INN  I      +   D  S   + L  GKKN+ 
Sbjct: 359 IDMLSETPLFKSKKEVRRAIDQKGIYINNVAIEGPTQTLSKADLASETALVLRKGKKNYC 418

Query: 413 ICHL 416
           +   
Sbjct: 419 VVKF 422


>gi|227548150|ref|ZP_03978199.1| tyrosyl-tRNA synthetase [Corynebacterium lipophiloflavum DSM 44291]
 gi|227079812|gb|EEI17775.1| tyrosyl-tRNA synthetase [Corynebacterium lipophiloflavum DSM 44291]
          Length = 423

 Score =  269 bits (687), Expect = 8e-70,   Method: Compositional matrix adjust.
 Identities = 157/417 (37%), Positives = 234/417 (56%), Gaps = 17/417 (4%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +D ++ L  RG I+Q ++  +L     Q  +T Y G+D T  SLHAGHL  L++L   Q 
Sbjct: 5   TDIIAELQWRGLINQSTDLEKLREETRQ-PITLYCGFDPTGPSLHAGHLVPLLMLRRFQM 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQE-IQENIEKIKGIFSSFIKYGTGKTDAL 124
            GH+PI L GG T  IGDP  RD   R M S + + +  ++I G  + F+ +  G   AL
Sbjct: 64  AGHRPIVLAGGATGKIGDP--RDVGERSMNSDDTVADWAQRISGQLARFMDF-DGDNAAL 120

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           ++NN  W   +  I  LR++G  FS++ MLS ++V+ RL+ +  +S+ EF+YM+LQA DF
Sbjct: 121 LVNNNDWTADMSVITFLRDVGKHFSLSTMLSRDTVKRRLEND-GISYTEFSYMLLQANDF 179

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK-TLSG 243
           V+L +N+DC LQ+GG DQWGN++ G+DL  R+   ++ ALT PL+T + G K GK T  G
Sbjct: 180 VQLRRNHDCVLQIGGGDQWGNLVGGVDLNRRMDGAQVHALTVPLVTDSEGKKFGKSTGGG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKI 301
           ++WL+ EMTSPY ++QY+ N  DADV+ + +  T L   E+ R+     +     EA+  
Sbjct: 240 SLWLDPEMTSPYTWYQYFVNTADADVIRYLRWFTFLDSEELSRLETEVAESPFKREAQIR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECF---DMSIHSQHMPTISISKDEVSR-----GMGLL 353
           +A E+T +VHG E    A  AA   F   D+    +     ++S+  V       G  ++
Sbjct: 300 LAQEMTDLVHGPEATRGAELAAQALFGRADLRELDERTLASAVSETRVHETAADAGETIV 359

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            L+V AG A S   ARR +K   +  NN  + +E       DF     + L  GKKN
Sbjct: 360 DLLVGAGLADSKGAARRSIKEGGVYANNERVESEDFVPAADDFLHGRWLVLRRGKKN 416


>gi|163787240|ref|ZP_02181687.1| tyrosyl-tRNA synthetase [Flavobacteriales bacterium ALC-1]
 gi|159877128|gb|EDP71185.1| tyrosyl-tRNA synthetase [Flavobacteriales bacterium ALC-1]
          Length = 432

 Score =  268 bits (686), Expect = 8e-70,   Method: Compositional matrix adjust.
 Identities = 152/430 (35%), Positives = 236/430 (54%), Gaps = 24/430 (5%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           F+  L+ RG +H  S P  ++    + + +AY+G+D TA SLH G+L  +MLL   Q+ G
Sbjct: 5   FVEELTWRGMLHD-SMPG-VEKHMDETMRSAYVGFDPTADSLHIGNLVPIMLLAHYQRCG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY-GTGKTDALML 126
           HKP++L+GG T +IGDPS +   R ++    ++ N E IK   S F+ + G     A+++
Sbjct: 63  HKPVALVGGATGMIGDPSGKSSERNLLDEATLRHNQEAIKNQLSHFLNFDGKTPNSAVLV 122

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQS---LSFLEFNYMILQAYD 183
           NN  W+    +++ +R++G   +VN M++ +SVR+R+  E S   +SF EF Y ++Q YD
Sbjct: 123 NNYDWMKEFSFLEFIRDVGKHITVNYMMAKDSVRNRISGESSNDGMSFTEFTYQLVQGYD 182

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ L +  DC +QMGGSDQWGNI  G +L  R+   K +A+T PL+T + G+K GK+  G
Sbjct: 183 FLHLYRANDCTIQMGGSDQWGNITTGTELIRRIGGGKGYAITCPLITKSDGSKFGKSEGG 242

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEA--KKI 301
            +WL+ + TSPY F+QYW N  D D   + K  T L   EI+ +      +      +K 
Sbjct: 243 NVWLDAKRTSPYKFYQYWLNSSDEDAEKYIKIFTFLTKEEIENIINEHSNDPGARILQKR 302

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDEVS 347
           +A EIT MVH +E+ E A  A+   F     +              + +    I+K E +
Sbjct: 303 LAEEITIMVHSKEDYENAVKASKILFSKDFKNEIKELDENLFLDVFEGVKQAEITKAEFN 362

Query: 348 RGMGLL-TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+ ++  L  K  F +S  EARR LK NAI +N   +  E  ++   D  +   I +S 
Sbjct: 363 DGIDMIGALAAKTNFLSSNGEARRALKENAIAVNKEKVK-EDYKLTSDDLINNKYIVISR 421

Query: 407 GKKNHIICHL 416
           GKK + I  +
Sbjct: 422 GKKTNFILKM 431


>gi|317474726|ref|ZP_07934000.1| tyrosyl-tRNA synthetase [Bacteroides eggerthii 1_2_48FAA]
 gi|316909407|gb|EFV31087.1| tyrosyl-tRNA synthetase [Bacteroides eggerthii 1_2_48FAA]
          Length = 430

 Score =  268 bits (686), Expect = 8e-70,   Method: Compositional matrix adjust.
 Identities = 151/427 (35%), Positives = 228/427 (53%), Gaps = 22/427 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG +H +    E   L ++  VTAYIG+D TA SLH GHL  +M+L   Q+ 
Sbjct: 2   NFVEELKWRGMLHDMMPGTEE--LLAKEQVTAYIGFDPTADSLHIGHLCSVMILRHFQRC 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD-ALM 125
           GHKP++L+GG T +IGDPS +   R ++  + +Q N+  +K   S F+ + +   + A +
Sbjct: 60  GHKPLALIGGATGMIGDPSGKSAERNLLTEETLQRNMAGMKKQLSKFLDFDSDAPNRAEL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQAYD 183
           +NN  W+    ++D  RE+G   +VN M++ +SV+ RL  E    LSF EF Y +LQ YD
Sbjct: 120 VNNYDWMKGFSFLDFAREVGKHITVNYMMAKDSVKKRLNGEARDGLSFTEFTYQLLQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ L +   C+LQMGGSDQWGNI  G +L  R    ++FALTSPL+T A G K GKT SG
Sbjct: 180 FLHLYETKGCKLQMGGSDQWGNITTGAELIRRTNGGEVFALTSPLITKADGGKFGKTESG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKKI 301
            IWL+   TSPY F+Q+W N+ DAD   + K  T+L   EI+ +         +   +K 
Sbjct: 240 NIWLDPRYTSPYKFYQFWLNVSDADAARYIKIFTSLSKEEIEALTAEHETAPHLRVLQKR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDEVS 347
           +A E+T MVH  E+   A  A+   F  +                 + +P   +S+D ++
Sbjct: 300 LAKEVTIMVHSEEDYNAAVDASNILFGNATSEALKKLDEDTLLAVFEGVPQFEVSRDALT 359

Query: 348 RGMGLLTLIV-KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+  + L V  A    S  E R+ ++   I +N   +      +   D      + +  
Sbjct: 360 AGVKAVDLFVDNAAVFASKGEMRKLVQGGGISLNKEKLVAFDQVVTTADLLDDKYLLVQR 419

Query: 407 GKKNHII 413
           GKKN+ +
Sbjct: 420 GKKNYYL 426


>gi|169629440|ref|YP_001703089.1| tyrosyl-tRNA synthetase (TyrS) [Mycobacterium abscessus ATCC 19977]
 gi|169241407|emb|CAM62435.1| Tyrosyl-tRNA synthetase (TyrS) [Mycobacterium abscessus]
          Length = 437

 Score =  268 bits (686), Expect = 9e-70,   Method: Compositional matrix adjust.
 Identities = 153/425 (36%), Positives = 239/425 (56%), Gaps = 28/425 (6%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S  L  L+ RG I Q ++   L    ++G ++ Y G+D TA+SLHAGHL  L+ L   Q+
Sbjct: 13  SSILDELTWRGLIAQTTDRDALAADIAKGPISVYGGFDPTAASLHAGHLVPLLTLSRFQR 72

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI-QENIEKIKGIFSSFIKYGTGKTDAL 124
            GH+PI L GG T +IGDP  RD S R +   ++  E  ++I+G    F+++    T A+
Sbjct: 73  AGHRPIVLAGGATGLIGDP--RDTSERNLHGTDVVAEWADRIRGQLERFVEFNDTPTGAI 130

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           + NN  W   +  ++ LR++G  FSVN ML  +++R RL+ +  +S+ EF+YM+LQA D+
Sbjct: 131 VANNLEWTGQLTALEFLRDLGKHFSVNVMLDRDTIRRRLEGD-GISYTEFSYMLLQANDY 189

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           V+L + Y C LQ+GGSDQWGNI+ G+ L  +     + ALT PL+T A GTK GK+  G 
Sbjct: 190 VQLHRKYGCSLQIGGSDQWGNIVAGVRLARQQDGASVHALTVPLVTAADGTKFGKSTGGG 249

Query: 245 -IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKI 301
            +WL+ EMTSPY ++QY+ N  DADVV + +  T L   EI  +     +  +E  A++ 
Sbjct: 250 NLWLDPEMTSPYAWYQYFINTADADVVRYLRWFTFLSAEEIGELETATTERAHERAAQRR 309

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQ------HMPTISISKDEVSRGMG---- 351
           +A E+TT+VHG     ++AT A+E    ++  +         T++ +  E   G      
Sbjct: 310 LAAEVTTLVHG-----ESATLAVEHASGALFGRGDLDRLDEGTLTAALTEAGNGEPARIA 364

Query: 352 ------LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLS 405
                 ++ L+V +G + S   ARR +K   + +NN+ +  E       D+ + G + L 
Sbjct: 365 DGEPDTIVDLLVSSGLSESKGAARRTVKEGGVYVNNTRVDAEDWTPGDGDYLTGGWLVLR 424

Query: 406 FGKKN 410
            GK+N
Sbjct: 425 RGKRN 429


>gi|218131651|ref|ZP_03460455.1| hypothetical protein BACEGG_03272 [Bacteroides eggerthii DSM 20697]
 gi|217985954|gb|EEC52293.1| hypothetical protein BACEGG_03272 [Bacteroides eggerthii DSM 20697]
          Length = 430

 Score =  268 bits (686), Expect = 9e-70,   Method: Compositional matrix adjust.
 Identities = 150/427 (35%), Positives = 228/427 (53%), Gaps = 22/427 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG +H +    E   L ++  VTAYIG+D TA SLH GHL  +M+L   Q+ 
Sbjct: 2   NFVEELKWRGMLHDMMPGTEE--LLAKEQVTAYIGFDPTADSLHIGHLCSVMILRHFQRC 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD-ALM 125
           GHKP++L+GG T +IGDPS +   R ++  + +Q N+  +K   S F+ + +   + A +
Sbjct: 60  GHKPLALIGGATGMIGDPSGKSAERNLLTEETLQRNMAGMKKQLSKFLDFDSDAPNRAEL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQAYD 183
           +NN  W+    ++D  RE+G   +VN M++ +SV+ RL  E    LSF EF Y +LQ YD
Sbjct: 120 VNNYDWMKGFSFLDFAREVGKHITVNYMMAKDSVKKRLNGEARDGLSFTEFTYQLLQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ L +   C+LQMGGSDQWGNI  G +L  R    ++FALTSPL+T A G K GKT SG
Sbjct: 180 FLHLYETKGCKLQMGGSDQWGNITTGAELIRRTNGGEVFALTSPLITKADGGKFGKTESG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKKI 301
            IWL+   TSPY F+Q+W N+ DAD   + K  T+L   EI+ +         +   +K 
Sbjct: 240 NIWLDPRYTSPYKFYQFWLNVSDADAARYIKIFTSLSKEEIEALTAEHETAPHLRVLQKR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDEVS 347
           +A E+T MVH  E+   A  A+   F  +                 + +P   +S+D ++
Sbjct: 300 LAKEVTIMVHSEEDYNAAVDASNILFGNATSEALKKLDEDTLLAVFEGVPQFEVSRDALT 359

Query: 348 RGMGLLTLIV-KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+  + L V  A    S  E R+ ++   + +N   +      +   D      + +  
Sbjct: 360 AGVKAVDLFVDNAAVFASKGEMRKLVQGGGVSLNKEKLVAFDQVVTTADLLDDKYLLVQR 419

Query: 407 GKKNHII 413
           GKKN+ +
Sbjct: 420 GKKNYYL 426


>gi|189464681|ref|ZP_03013466.1| hypothetical protein BACINT_01025 [Bacteroides intestinalis DSM
           17393]
 gi|189436955|gb|EDV05940.1| hypothetical protein BACINT_01025 [Bacteroides intestinalis DSM
           17393]
          Length = 430

 Score =  268 bits (686), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 152/427 (35%), Positives = 229/427 (53%), Gaps = 22/427 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG +H +    E   L ++  VTAYIG+D TA SLH GHL  +M+L   Q+ 
Sbjct: 2   NFVEELKWRGMLHDMMPGTEE--LLAKEQVTAYIGFDPTADSLHIGHLCSVMILRHFQRC 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD-ALM 125
           GHKP++L+GG T +IGDPS +   R ++  + +Q N++ +K     F+ + +   + A +
Sbjct: 60  GHKPMALIGGATGMIGDPSGKSAERNLLTEEILQRNMDGMKKQLGKFLDFESDAPNRAEL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQAYD 183
           +NN  W+ +  ++D  RE+G   +VN M++ +SV+ RL  E    LSF EF Y +LQ YD
Sbjct: 120 VNNYDWMKNFTFLDFAREVGKHITVNYMMAKDSVKKRLNGEARDGLSFTEFTYQLLQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ L +   C+LQMGGSDQWGNI  G +L  R    ++FALTSPL+T A G K GKT SG
Sbjct: 180 FLHLYETKGCKLQMGGSDQWGNITTGAELIRRTNGGEVFALTSPLITKADGGKFGKTESG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKKI 301
            IWL+   TSPY F+Q+W N+ DAD   + K  T+L   EID +         +   +K 
Sbjct: 240 NIWLDPRYTSPYKFYQFWLNVSDADAARYIKIFTSLSKEEIDALIVEHEAAPHLRILQKR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDEVS 347
           +A E+T MVH  E+   A  A+   F  +                 + +P   +SKD V+
Sbjct: 300 LAKEVTIMVHSEEDYNAAVDASNILFGNATSDALKKLDEDTLLAVFEGVPQFEVSKDAVA 359

Query: 348 RGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+  + L  + A    S  E R+ ++   + +N   +      I   D      + +  
Sbjct: 360 AGVKAVDLFTENAAIFASKGEMRKLVQGGGVSLNKEKLEAFDQVITSADLLDEKYLLVQR 419

Query: 407 GKKNHII 413
           GKKN+ +
Sbjct: 420 GKKNYYL 426


>gi|311113284|ref|YP_003984506.1| tyrosine--tRNA ligase [Rothia dentocariosa ATCC 17931]
 gi|310944778|gb|ADP41072.1| tyrosine--tRNA ligase [Rothia dentocariosa ATCC 17931]
          Length = 434

 Score =  268 bits (686), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 153/411 (37%), Positives = 228/411 (55%), Gaps = 21/411 (5%)

Query: 15  RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLM 74
           RG +H  ++   L+   S   +T Y GYD TA+SLH GHL QL+++  LQ  GH P+ L+
Sbjct: 25  RGLVHVSTDEEALEKALSDEKLTFYTGYDPTAASLHLGHLVQLLVMRRLQLAGHYPLGLV 84

Query: 75  GGGTSIIGDPSFRDESRRMMRSQEI-QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
           GG T +IGDP  R  S R++ S+E+  E ++ ++     F+ +  G+  A M+NN  W  
Sbjct: 85  GGFTGLIGDP--RQTSERVLNSREVVAEWVQSLRSQIERFLSF-EGENAARMVNNLDWGG 141

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDC 193
            +  ID LR+IG  F V  M+  E V  RL  E+ +S+ EF+Y ILQ  D++EL + Y C
Sbjct: 142 QLSAIDFLRDIGKHFRVGTMVKKEIVAKRLNSEEGISYTEFSYQILQGLDYLELNRQYGC 201

Query: 194 RLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTS 253
            LQ GGSDQWGN+  G +L  +++   + A+ +PL+T + GTK GK+   AIWLN EM S
Sbjct: 202 TLQTGGSDQWGNLTSGTELIRKVEGKTVHAIGTPLITNSDGTKFGKSEGNAIWLNPEMCS 261

Query: 254 PYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA-KLQGKEIN-EAKKIIATEITTMVH 311
           PY F+Q+W N  DADV+   K  T L  +EI     K++ +    E +K +A E+T +VH
Sbjct: 262 PYAFYQFWLNTADADVIDRLKVFTFLTRAEIGEYEHKVEAEAYKRETQKRLAYEVTALVH 321

Query: 312 GREEAEKAATAAMECF---DMSIHSQ--------HMPTISISKDEVSRGMGLLTLIVKAG 360
           G E  E+A  A+   F   D +   +         +P++ +S D +     L+T + + G
Sbjct: 322 GVEPTEQAIAASEALFGKGDFAALDESTLQAVMDELPSVELSSDRLD----LITALTELG 377

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           FA+S +EARR LK     +N   +  E  +I  +         +  GKKN 
Sbjct: 378 FASSKSEARRILKEGGASVNGVKVQGEDARISSEQLLHGKYAIVRRGKKNQ 428


>gi|227541548|ref|ZP_03971597.1| tyrosine--tRNA ligase [Corynebacterium glucuronolyticum ATCC 51866]
 gi|227182704|gb|EEI63676.1| tyrosine--tRNA ligase [Corynebacterium glucuronolyticum ATCC 51866]
          Length = 419

 Score =  268 bits (685), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 160/412 (38%), Positives = 235/412 (57%), Gaps = 20/412 (4%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           LS RG I+Q ++   L   C Q  +T Y G+D T SSLHAGHL  L++L   Q+ GH  +
Sbjct: 7   LSWRGLINQSTDLDALKEACEQ-PITLYCGFDPTGSSLHAGHLVPLIMLRRFQQAGHHVL 65

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQE-IQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           +L GG T +IGDP  RD   R M S E ++EN+  I+G  S F++    K +  +LNN  
Sbjct: 66  ALGGGATGMIGDP--RDVGERSMLSDETVRENLASIQGQISKFVELDGEKGE--LLNNAD 121

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           W+  +  I+ LR+IG  FS+N ML  ++V+ RL+ +  +S+ EF+YM+LQA D+V LA+ 
Sbjct: 122 WISKMNVIEFLRDIGKSFSLNVMLDRDTVKRRLEND-GMSYTEFSYMLLQANDYVHLARA 180

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK-TLSGAIWLNK 249
           Y+C LQ+GG DQWGNI+ G+DL  R+   K+  LT PL+T A G K GK T  G +WL+ 
Sbjct: 181 YNCSLQIGGGDQWGNIVSGVDLNRRMDGRKVHGLTVPLVTDAEGKKFGKSTGGGKLWLDP 240

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIATEIT 307
           E+TSPY+++QY+ N  D+ V+++ K  T L   EI    +    +    EA+K +A E+T
Sbjct: 241 ELTSPYSWYQYFINAGDSVVINYLKWFTFLTQEEIAEYEQKVADQPFKREAQKRLAQELT 300

Query: 308 TMVHGREEAEKA---------ATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVK 358
           T+VHG EEA KA           A ++  D    +  +   ++++        ++ L+V 
Sbjct: 301 TLVHG-EEATKAVELATQALFGKAELDSLDEKTLAGALAETTVAEVSAGDEPTIVDLLVA 359

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
           AG A S   ARR +K      NN  I + + + K  D      + L  GKKN
Sbjct: 360 AGLAESKGAARRAIKEGGAYANNKRIEDAEWKPKESDLLHGSWLVLRKGKKN 411


>gi|227488150|ref|ZP_03918466.1| tyrosine--tRNA ligase [Corynebacterium glucuronolyticum ATCC 51867]
 gi|227092012|gb|EEI27324.1| tyrosine--tRNA ligase [Corynebacterium glucuronolyticum ATCC 51867]
          Length = 419

 Score =  268 bits (685), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 160/412 (38%), Positives = 235/412 (57%), Gaps = 20/412 (4%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           LS RG I+Q ++   L   C Q  +T Y G+D T SSLHAGHL  L++L   Q+ GH  +
Sbjct: 7   LSWRGLINQSTDLDALKEACEQ-PITLYCGFDPTGSSLHAGHLVPLIMLRRFQQAGHHVL 65

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQE-IQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           +L GG T +IGDP  RD   R M S E ++EN+  I+G  S F++    K +  +LNN  
Sbjct: 66  ALGGGATGMIGDP--RDVGERSMLSDETVRENLASIQGQISKFVELDGEKGE--LLNNAD 121

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           W+  +  I+ LR+IG  FS+N ML  ++V+ RL+ +  +S+ EF+YM+LQA D+V LA+ 
Sbjct: 122 WISKMNVIEFLRDIGKSFSLNVMLDRDTVKRRLEND-GMSYTEFSYMLLQANDYVHLARA 180

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK-TLSGAIWLNK 249
           Y+C LQ+GG DQWGNI+ G+DL  R+   K+  LT PL+T A G K GK T  G +WL+ 
Sbjct: 181 YNCSLQIGGGDQWGNIVSGVDLNRRMDGRKVHGLTVPLVTDAEGKKFGKSTGGGKLWLDP 240

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIATEIT 307
           E+TSPY+++QY+ N  D+ V+++ K  T L   EI    +    +    EA+K +A E+T
Sbjct: 241 ELTSPYSWYQYFINAGDSVVINYLKWFTFLTQEEIAEYEQKVADQPFKREAQKRLAQELT 300

Query: 308 TMVHGREEAEKA---------ATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVK 358
           T+VHG EEA KA           A ++  D    +  +   ++++        ++ L+V 
Sbjct: 301 TLVHG-EEATKAVELATQALFGKAELDSLDEKTLAGALAETTVAEVSAGDEPTIVDLLVA 359

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
           AG A S   ARR +K      NN  I + + + K  D      + L  GKKN
Sbjct: 360 AGLAESKGAARRAIKEGGAYANNKRIEDAEWKPKESDLLHGSWLVLRKGKKN 411


>gi|289550516|ref|YP_003471420.1| Tyrosyl-tRNA synthetase, cluster 1 [Staphylococcus lugdunensis
           HKU09-01]
 gi|315658007|ref|ZP_07910881.1| tyrosine--tRNA ligase [Staphylococcus lugdunensis M23590]
 gi|289180048|gb|ADC87293.1| Tyrosyl-tRNA synthetase, cluster 1 [Staphylococcus lugdunensis
           HKU09-01]
 gi|315497043|gb|EFU85364.1| tyrosine--tRNA ligase [Staphylococcus lugdunensis M23590]
          Length = 420

 Score =  268 bits (685), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 142/386 (36%), Positives = 225/386 (58%), Gaps = 20/386 (5%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L  RG I+Q ++   ++ L ++  V+ Y G D TA SLH GHL   + L   Q+ G
Sbjct: 5   LLEDLKWRGLIYQQTDEEGIEELLNKEQVSLYCGADPTADSLHIGHLLPFLTLRRFQQHG 64

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+PI L+GGGT +IGDPS + E R +   +++++N++ I        ++GT K  A+++N
Sbjct: 65  HRPIVLIGGGTGMIGDPSGKSEERVLQTEEQVEDNVQGINAQMHKLFEFGTEKG-AVLVN 123

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N+ WL  I  I  LR+ G    VN ML+ +S++SRL  E  +S+ EF Y ILQA DF  L
Sbjct: 124 NKDWLGQISLISFLRDYGKHVGVNYMLAKDSIQSRL--ENGISYTEFTYTILQAIDFGHL 181

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERL-KTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
            +N +C++Q+GGSDQWGNI  GI+L  R+    + + LT PL+T + G K GK+ SGA+W
Sbjct: 182 NQNLNCKIQVGGSDQWGNITSGIELMRRMYGQTEAYGLTIPLVTKSDGKKFGKSESGAVW 241

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKKIIAT 304
           L+ + TSPY F+Q+W N  D DV+ F K  T L   EI+R+  ++ +   + EA+K +A 
Sbjct: 242 LDADKTSPYEFYQFWINQSDDDVIKFLKYFTFLNKEEIERLEASRDEQPHLREAQKALAE 301

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLT 354
            +T ++HG++  + A   +   F   + S          + +P + +S D  +    ++ 
Sbjct: 302 NVTKLIHGQDALDDAIRISQALFSGDLKSLSAKELKEGFKDVPQVELSADNTN----IVE 357

Query: 355 LIVKAGFATSTNEARRHLKSNAIKIN 380
            +V+ G ++S  +AR  + + AI IN
Sbjct: 358 ALVETGISSSKRQAREDVNNGAIYIN 383


>gi|228474511|ref|ZP_04059244.1| tyrosine--tRNA ligase [Staphylococcus hominis SK119]
 gi|228271540|gb|EEK12902.1| tyrosine--tRNA ligase [Staphylococcus hominis SK119]
          Length = 420

 Score =  268 bits (685), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 144/382 (37%), Positives = 222/382 (58%), Gaps = 12/382 (3%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L  RG I+Q ++ + ++ L ++  VT Y G D TA SLH GHL   M L   Q+ G
Sbjct: 5   LLEELQWRGLIYQQTDEQGIEDLLNKEQVTLYCGADPTADSLHIGHLLPFMTLRRFQEHG 64

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+PI L+GGGT +IGDPS + E R +    ++ +N+E +        ++GT K  A+++N
Sbjct: 65  HRPIVLIGGGTGMIGDPSGKSEERVLQTEDQVAKNVEGLSAQMHKLFEFGTDKG-AVLVN 123

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  I  I  LR+ G    VN ML  +S++SRL  E  +S+ EF Y ILQA DF  L
Sbjct: 124 NRDWLSQISLISFLRDHGKHVGVNYMLGKDSIQSRL--ENGISYTEFTYTILQAIDFGHL 181

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERL-KTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
            +  +C++Q+GGSDQWGNI  GI+L  R+    + + LT PL+T + G K GK+ SGA+W
Sbjct: 182 NRELNCKIQVGGSDQWGNITSGIELMRRMYGQTEAYGLTIPLVTKSDGKKFGKSESGAVW 241

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKKIIAT 304
           L+ E T+PY F+Q+W N  D DV+ F K  T L   +I+R+  ++ +   + EA+K +A 
Sbjct: 242 LDAEKTTPYEFYQFWINQSDEDVIKFLKYFTFLSKEDINRLEQSRDEAPHLREAQKALAE 301

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI-----SISKDEVSRG-MGLLTLIVK 358
            +T  +HG+E  + A   +   F   + S  +  I      + + EVS+    ++ ++++
Sbjct: 302 NVTEFIHGKEALDDAIRISEALFKGDLKSLSIKDIKAGFKEVPQVEVSKATTNIIDVLIE 361

Query: 359 AGFATSTNEARRHLKSNAIKIN 380
           +G A+S  +AR  + + AI IN
Sbjct: 362 SGIASSKRQAREDVNNGAIYIN 383


>gi|183982502|ref|YP_001850793.1| tyrosyl-tRNA synthase, TyrS [Mycobacterium marinum M]
 gi|183175828|gb|ACC40938.1| tyrosyl-tRNA synthase, TyrS [Mycobacterium marinum M]
          Length = 430

 Score =  268 bits (685), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 154/425 (36%), Positives = 235/425 (55%), Gaps = 18/425 (4%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCS---QGVVTAYIGYDLTASSLHAGHLTQL 57
           M +  S    IL E G+   I+   +LD L +   +  +T Y G+D TA+SLHAGHL  L
Sbjct: 1   MSSNSSGSAGILDELGWRGLIAQSTDLDALAADVQRPPLTVYAGFDPTAASLHAGHLVPL 60

Query: 58  MLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN-IEKIKGIFSSFIKY 116
           + L   Q+ GH+PI L GG T +IGDP  RD   R +   +   N  E+I+G    F+ +
Sbjct: 61  LALRRFQRAGHRPIVLAGGATGMIGDP--RDIGERSLNDADTVANWTERIRGQLERFVDF 118

Query: 117 GTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNY 176
               T A++ NN  W  ++  ++ LR++G  FSVN ML  +++R RL+ E  +S+ EF+Y
Sbjct: 119 DGSPTGAIVENNLEWTAAMSTVEFLRDVGKHFSVNVMLDRDTIRRRLEGE-GISYTEFSY 177

Query: 177 MILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTK 236
           M+LQA D+VEL + + C LQ+GGSDQWGNII G+ L  +     + ALT PL+T A GTK
Sbjct: 178 MLLQANDYVELHRRHGCTLQIGGSDQWGNIIAGVRLVRQKSGAAVHALTVPLVTAADGTK 237

Query: 237 MGK-TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI 295
            GK T  G++WL+ EMTSPY ++QY+ N  DADV+ + +  T L   E+  + +   +  
Sbjct: 238 FGKSTGGGSLWLDPEMTSPYAWYQYFVNTADADVIRYLRWFTFLVAEELTELEQATAERP 297

Query: 296 NE--AKKIIATEITTMVHGREEAEKAATAAMECF--------DMSIHSQHMPTISISKDE 345
           ++  A++ +A E+TT+VHG    E    A+   F        D +     +   SI++ E
Sbjct: 298 HQRAAQRRLAAELTTLVHGEAATEAVEHASRALFGHGELSRLDEATLGAALRETSIAELE 357

Query: 346 VSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLS 405
                G++ L+V  G + S   ARR +    + +NN  +  ++   +  DF     + L 
Sbjct: 358 PGTPDGIVDLLVATGLSASKGAARRTIGEGGVSVNNIRVETDEWVPQTSDFLHGRWLVLR 417

Query: 406 FGKKN 410
            GK+N
Sbjct: 418 RGKRN 422


>gi|254226310|ref|ZP_04919901.1| tyrosyl-tRNA synthetase [Vibrio cholerae V51]
 gi|125621172|gb|EAZ49515.1| tyrosyl-tRNA synthetase [Vibrio cholerae V51]
          Length = 434

 Score =  268 bits (685), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 161/422 (38%), Positives = 231/422 (54%), Gaps = 23/422 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG I Q S P E  +         Y G+D TA SLH GHL  L++L   Q  GH+ I
Sbjct: 18  LQQRGLIAQ-STPLEALVERFATSQVLYCGFDPTAGSLHIGHLVPLLMLKRFQNAGHQAI 76

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM-LNNET 130
           +L+GG T +IGDPSF+   R +  +Q +Q+ +  +    +  +   +    +LM +NN  
Sbjct: 77  ALIGGATGMIGDPSFKANERVLNSAQTVQQWVSDLSQQITQLMASQSENCASLMTVNNAD 136

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDFVELAK 189
           W+  I  ID  R++G  FSVN M++ ESV+ RL R +Q +SF EF+Y +LQ+YDF  L +
Sbjct: 137 WIGKINLIDFFRDVGKHFSVNTMINRESVKQRLARPDQGISFTEFSYSLLQSYDFAHLNR 196

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
            + C LQ+GG+DQWGNI+ GIDL  RL   ++  LT PL+T + GTK GKT SGA+WL  
Sbjct: 197 EFGCTLQIGGNDQWGNIVSGIDLTRRLNGAEVCGLTLPLITKSDGTKFGKTESGAVWLES 256

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEIT 307
             TSPY F+Q+W N DDADV  F    T L  +EI+  R A        +A++I+A  +T
Sbjct: 257 SKTSPYRFYQFWLNSDDADVYRFLAYYTFLSAAEIEEIRQADALRAGKPQAQQILAEHVT 316

Query: 308 TMVHGRE--EAEKAATAAMECFDMSIHS---------QHMPTISISKDEVSRGMGLLTLI 356
             VHG E   A +  T A+   D+S  S           +P ++ S+ +       L L+
Sbjct: 317 RFVHGEEGLAAAQRITQALFSGDVSYLSLSELAQLELDGLPCVAASRSDTL-----LDLL 371

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           + AG A+S  +AR  L++ AI++N   +  E +      FD      L  GKK   +  L
Sbjct: 372 LSAGLASSKRQAREWLENGAIRVNGERVQQEGVLSGFALFDRY--YVLQRGKKQFALVKL 429

Query: 417 CG 418
            G
Sbjct: 430 EG 431


>gi|190568333|ref|ZP_03021241.1| tyrosyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I]
 gi|190560589|gb|EDV14566.1| tyrosyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I]
          Length = 418

 Score =  268 bits (685), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 148/385 (38%), Positives = 222/385 (57%), Gaps = 19/385 (4%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L  L  RG I+Q ++   L+ L  +  V  Y G+D TA SLH GH+  +++L   Q  GH
Sbjct: 4   LQDLEFRGLINQQTDAEGLEQLLEKESVKLYCGFDPTADSLHIGHMLPVLMLRRFQLAGH 63

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           +PI+L+GGGT +IGD S +   R +     +    E IK   S+F+++   +  A M NN
Sbjct: 64  QPIALVGGGTGMIGDSSGKKAERTLNTKDTVAYYTESIKNQLSNFLEFENVENPATMANN 123

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL ++  I  LR+IG  F +N ML+ ++V SRL  E  +SF EF+YMILQ+YDF+ L 
Sbjct: 124 YDWLGNLDVISFLRDIGKNFGLNYMLAKDTVASRL--ETGISFTEFSYMILQSYDFLNLY 181

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKT-PKLFALTSPLLTTASGTKMGKTLSGAIWL 247
           ++++CRLQ+GGSDQWGNI  G++L  + +   K F LT PL+T + GTK GKT  GAIWL
Sbjct: 182 QHHNCRLQIGGSDQWGNITAGLELIRKSEEDAKAFGLTIPLVTKSDGTKFGKTEGGAIWL 241

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATE 305
           + E T+PY F+Q+W N DD DVV + K  T L   EI  + K   +  E   A+K +  E
Sbjct: 242 DPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLSHEEILELEKQVAEAPEKRAAQKALGAE 301

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTL 355
           +T +VHG E  E+A   +   F  S+            + +P++  + ++      L+ L
Sbjct: 302 MTKLVHGEEALEQAIKISAALFSGSVAELTASEIEQGFKDVPSVERTAEDTV----LIDL 357

Query: 356 IVKAGFATSTNEARRHLKSNAIKIN 380
           +V++  + S  +AR  + + AI +N
Sbjct: 358 LVESKISPSKRQAREDVTNGAIYVN 382


>gi|111017956|ref|YP_700928.1| tyrosyl-tRNA synthetase [Rhodococcus jostii RHA1]
 gi|110817486|gb|ABG92770.1| tyrosine--tRNA ligase [Rhodococcus jostii RHA1]
          Length = 429

 Score =  268 bits (685), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 152/420 (36%), Positives = 231/420 (55%), Gaps = 15/420 (3%)

Query: 3   AFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
           A   + +  L+ RG I Q ++   L      G VT Y G+D T  SLHAGHL  L+ L  
Sbjct: 4   AVTENIIDELTWRGLIAQSTDLDALRRDLDAGPVTLYAGFDPTGPSLHAGHLVPLLALKR 63

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQE-IQENIEKIKGIFSSFIKYGTGKT 121
            Q+ G++PI L GG T +IGDP  RD   R M S + + E  ++I+G    F+ +    +
Sbjct: 64  FQRAGNRPIVLAGGATGLIGDP--RDVGERTMNSADTVAEWADRIRGQLERFVDFDESPS 121

Query: 122 DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA 181
            A++ NN  W   +  ID LR++G  FSVN ML+ ++V+ RL+ +  +S+ EF+YM+LQA
Sbjct: 122 GAIIENNMNWTGKLSAIDFLRDVGKHFSVNVMLARDTVKRRLESD-GMSYTEFSYMLLQA 180

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK-T 240
            D++ L +++ C LQ+GGSDQWGNII G++L  R+    +  LT PL+T+A G K GK T
Sbjct: 181 NDYLHLRRSHGCSLQVGGSDQWGNIIAGVELNRRIDAESVHGLTVPLVTSADGKKFGKST 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEA 298
             G++WL++EMTSPY ++QY+ N  DADV+ + +  T L   E+  +  A  +     EA
Sbjct: 241 GGGSLWLDQEMTSPYAWYQYFVNTGDADVIKYLRWFTFLTAEELAELETATAERPHAREA 300

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMS-IHSQHMPTISISKDEVS-------RGM 350
           ++ +A E+TT+VHG         A+   F  + +     PT+  +  E S          
Sbjct: 301 QRRLAAEMTTLVHGEANTRAVELASQALFGRAELQDLDEPTLGAALREASVAELAPGEPA 360

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
           G++ L+V +G   S   ARR +K     +NN  IS+E       D      + +  GK+N
Sbjct: 361 GIVDLLVLSGLCESKGAARRTVKEGGASVNNQKISSEDWTPAPTDLLHGTWLVIRRGKRN 420


>gi|332639171|ref|ZP_08418034.1| tyrosyl-tRNA synthetase [Weissella cibaria KACC 11862]
          Length = 419

 Score =  268 bits (684), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 156/400 (39%), Positives = 221/400 (55%), Gaps = 25/400 (6%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D L  L+ RG I+Q ++   L    ++  +  Y+G D T  S+H GHL   M+L   Q  
Sbjct: 4   DILQELAWRGAINQTTDEDGLREQMTKEQIGVYVGIDPTGDSMHIGHLIPFMILKRFQLA 63

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           G KP+ ++GG T  IGDPS +   R+++  +++  N+EKI+           G+    ++
Sbjct: 64  GQKPVIVVGGATGSIGDPSGKKSERKLLSQEDVAANVEKIRAQMVKLF----GEDGFTIV 119

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  +  +D+LRE G  FS+N ML+ + V SRL  E  +SF EF Y ILQ+ DF E
Sbjct: 120 NNFDWLGKLSLLDMLREYGKLFSINTMLAKDVVASRL--EAGISFTEFTYQILQSIDFHE 177

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLK--TPKLFALTSPLLTTASGTKMGKTLSGA 244
           L K  + RLQ+GGSDQWGNI  GIDL  +L+      F LT PLL  A GTK GKT  GA
Sbjct: 178 LWKRENVRLQVGGSDQWGNITGGIDLIHKLEGGEAPAFGLTVPLLLKADGTKFGKTEGGA 237

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM-AKLQ-GKEINEAKKII 302
           +WL+ E T+P+ F+Q+W N  D+DV    K  T L   EI  + A LQ       A++ +
Sbjct: 238 VWLDPEKTTPFEFYQFWLNTADSDVEKMLKYFTFLSQDEISALVADLQENAAARNAQRRL 297

Query: 303 ATEITTMVHGREEAEKAAT-----------AAMECFDMSIHSQHMPTISISKDEVSRGMG 351
           A E+TT VHG E  + A T           A +   +++I + ++PT  I   E+    G
Sbjct: 298 AQEVTTFVHGAEAVKTAETMTKVLFGNADVAELTTEEVAILAGNVPTFEIDNAEI----G 353

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
           LL L+V AG   S   AR+ +K  AI+IN   I++E+  I
Sbjct: 354 LLDLVVAAGLEKSKTAARKSVKDGAIRINGEQITDEEAVI 393


>gi|291010100|ref|ZP_06568073.1| tyrosyl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338]
          Length = 424

 Score =  268 bits (684), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 148/401 (36%), Positives = 221/401 (55%), Gaps = 15/401 (3%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  LS RG I Q ++   L      G +T Y G+D TA SLHAGHL  ++ L   Q+ G
Sbjct: 5   ILDDLSWRGLIAQSTDLDTLRSDLDAGPLTLYAGFDPTAPSLHAGHLIPILTLRRFQQAG 64

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQE-IQENIEKIKGIFSSFIKYGTGKTDALML 126
           H+P+ L GG T +IGDP  RD   R +   + + E  E+I+   S+F+ +    T A+M 
Sbjct: 65  HRPVVLAGGATGLIGDP--RDVGERNLHDADTVVEWTERIRRQLSAFVDFDDTPTGAIMA 122

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   +     LR+IG  FSVN ML+ E+VR RL+ +  +S+ EF+YM+LQA D+VE
Sbjct: 123 NNADWTADLPVTAFLRDIGKHFSVNTMLARETVRRRLETD-GISYTEFSYMLLQANDYVE 181

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA-I 245
           L + +   LQ+GGSDQWGNII G+DL  +     + ALT PL+T A G K GK+  G  +
Sbjct: 182 LHRRHGTSLQLGGSDQWGNIIAGVDLVRKQNGAAVHALTLPLVTDAEGRKFGKSTGGGNV 241

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINEAKKIIA 303
           WL+  MTSPY ++QY+ N  DADV  + +  T L   EI+ + +   +  ++   ++ +A
Sbjct: 242 WLDPAMTSPYAWYQYFVNAADADVAKYLRLFTFLSREEIEELERTTAEKPQLRAGQRRLA 301

Query: 304 TEITTMVHGREEAEKAATAAMECF--------DMSIHSQHMPTISISKDEVSRGMGLLTL 355
            E+TT+VHG ++  +  TA+   F        D S     M  +   + ++S G  ++ L
Sbjct: 302 EELTTLVHGEQQTRQVVTASQALFGRGELRDLDESTLDAAMAEVPTGEVDLSDGPTIVEL 361

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
           +V+ G       ARR +      +NNS I++E      +D 
Sbjct: 362 LVETGLVAGRGAARRTVNEGGAYVNNSKIADETWSPSKEDL 402


>gi|297170695|gb|ADI21718.1| tyrosyl-tRNA synthetase [uncultured actinobacterium HF0130_15N16]
          Length = 422

 Score =  268 bits (684), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 154/419 (36%), Positives = 225/419 (53%), Gaps = 20/419 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D LS L  RG IH  ++   L    + G V  Y G+D TA SLH G+L  L+ L   Q  
Sbjct: 2   DILSDLEARGLIHDTTDRAALASRLAAGPVVLYCGFDPTAESLHVGNLIGLLTLRRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH PISL GG T ++GDPS RD  R ++  + + +N+E I      F+++  G++ A +L
Sbjct: 62  GHLPISLAGGATGMVGDPSGRDSERNLLDDEGLAKNLEGILPQLRQFLEF-DGESPAKLL 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           +N  W      +D LR+IG   +VN+M++ +SVRSR+     +SF EF+YM+LQ YDF+ 
Sbjct: 121 DNRAWTVGTSVLDFLRDIGKHVTVNQMIAKDSVRSRMSEGDGISFTEFSYMLLQGYDFLW 180

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG-AI 245
           LA+N  C LQ+GGSDQWGNI+ G DL  R       A+T PLLT   G+K GKT  G  I
Sbjct: 181 LAENEKCELQVGGSDQWGNIVLGADLIRRKLGKTAHAMTWPLLTKPDGSKYGKTAGGETI 240

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE--INEAKKIIA 303
           WL+ E  SPY F+Q W  +DD++V     +LT L + E+D +      +  +   ++ +A
Sbjct: 241 WLSAEKMSPYRFYQSWIGVDDSEVRKLLLQLTFLSVQEVDSLVAEHEDQPHLRIGQRALA 300

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIH------------SQHMPTISISKDEVSRGMG 351
            EIT +VHG   A+ A  A+   FD ++             S+ +P   I+  +VS    
Sbjct: 301 NEITKIVHGEPAADSAIEASQVLFDSTMDISAVSESALDFVSREVPYSEIALADVS---- 356

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
           L+ L+V+ G   S  EA+R +    + +N    S+        D      + L  GKK+
Sbjct: 357 LVDLLVETGLCQSRKEAKRAVTEGGVYVNGERPSDSGFAPTSNDLLHGKYLLLRRGKKS 415


>gi|134101758|ref|YP_001107419.1| tyrosyl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338]
 gi|133914381|emb|CAM04494.1| tyrosyl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338]
          Length = 433

 Score =  268 bits (684), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 148/401 (36%), Positives = 221/401 (55%), Gaps = 15/401 (3%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  LS RG I Q ++   L      G +T Y G+D TA SLHAGHL  ++ L   Q+ G
Sbjct: 14  ILDDLSWRGLIAQSTDLDTLRSDLDAGPLTLYAGFDPTAPSLHAGHLIPILTLRRFQQAG 73

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQE-IQENIEKIKGIFSSFIKYGTGKTDALML 126
           H+P+ L GG T +IGDP  RD   R +   + + E  E+I+   S+F+ +    T A+M 
Sbjct: 74  HRPVVLAGGATGLIGDP--RDVGERNLHDADTVVEWTERIRRQLSAFVDFDDTPTGAIMA 131

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   +     LR+IG  FSVN ML+ E+VR RL+ +  +S+ EF+YM+LQA D+VE
Sbjct: 132 NNADWTADLPVTAFLRDIGKHFSVNTMLARETVRRRLETD-GISYTEFSYMLLQANDYVE 190

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA-I 245
           L + +   LQ+GGSDQWGNII G+DL  +     + ALT PL+T A G K GK+  G  +
Sbjct: 191 LHRRHGTSLQLGGSDQWGNIIAGVDLVRKQNGAAVHALTLPLVTDAEGRKFGKSTGGGNV 250

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINEAKKIIA 303
           WL+  MTSPY ++QY+ N  DADV  + +  T L   EI+ + +   +  ++   ++ +A
Sbjct: 251 WLDPAMTSPYAWYQYFVNAADADVAKYLRLFTFLSREEIEELERTTAEKPQLRAGQRRLA 310

Query: 304 TEITTMVHGREEAEKAATAAMECF--------DMSIHSQHMPTISISKDEVSRGMGLLTL 355
            E+TT+VHG ++  +  TA+   F        D S     M  +   + ++S G  ++ L
Sbjct: 311 EELTTLVHGEQQTRQVVTASQALFGRGELRDLDESTLDAAMAEVPTGEVDLSDGPTIVEL 370

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
           +V+ G       ARR +      +NNS I++E      +D 
Sbjct: 371 LVETGLVAGRGAARRTVNEGGAYVNNSKIADETWSPSKEDL 411


>gi|319948165|ref|ZP_08022325.1| tyrosyl-tRNA synthetase [Dietzia cinnamea P4]
 gi|319438149|gb|EFV93109.1| tyrosyl-tRNA synthetase [Dietzia cinnamea P4]
          Length = 426

 Score =  268 bits (684), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 158/422 (37%), Positives = 232/422 (54%), Gaps = 15/422 (3%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M    ++ L  L  RG I Q ++   L      G V+ Y G+D T  SLHAGHL  L+ L
Sbjct: 1   MTVVTNNILDELQWRGLIAQSTDLDALRTHLDAGTVSLYCGFDPTGPSLHAGHLIPLLTL 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQE-IQENIEKIKGIFSSFIKYGTG 119
              Q  GH+PI L GG T +IGDP  R+   R+M + + + E  E+I G    F+    G
Sbjct: 61  RRFQLAGHRPIVLAGGATGMIGDP--REVGERVMNTSDTVAEWTERIAGQLELFVDLTEG 118

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
            T A ++NN  W   +  I+ LR++G  FS+N ML  ++V+ RL+ E  +SF EF+YM+L
Sbjct: 119 PTGARVVNNMQWTGHMTVIEFLRDVGKHFSLNTMLGRDTVKRRLEGE-GISFTEFSYMLL 177

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK 239
           QA DF++L +N  C LQ+GGSDQWGNII G+DL  R+    + A+T PL+T+A G K GK
Sbjct: 178 QANDFLQLRRNMGCTLQLGGSDQWGNIIGGVDLNRRVDGETVHAMTVPLVTSADGKKFGK 237

Query: 240 -TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEIN 296
            T  G++WL+  MTSPY ++QY+ N  DADVV + +  + L   EID +  L      + 
Sbjct: 238 STGGGSLWLDPSMTSPYTWYQYFLNTADADVVRYLRWFSFLGREEIDELEALTRDKPHLR 297

Query: 297 EAKKIIATEITTMVHGREEAEKAATAAMECFDMS-IHSQHMPTISISKD-----EVSRG- 349
            A+K +A E+TT+VHG    E    AA   F    ++     T++ + +     E++ G 
Sbjct: 298 AAQKRLAEEMTTLVHGVAATESVQAAAQALFGRGELNGLDEATLAAALEDAGAVEIAPGS 357

Query: 350 -MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGK 408
              ++ L+V +G + S   ARR +      +NN  +S+ +      D    G + L  GK
Sbjct: 358 PTTIVDLLVASGLSESKGAARRAVGEGGAYVNNERVSDPEWTPSSGDLLHGGWLVLRRGK 417

Query: 409 KN 410
           KN
Sbjct: 418 KN 419


>gi|312132229|ref|YP_003999569.1| tyrosyl-tRNA synthetase [Leadbetterella byssophila DSM 17132]
 gi|311908775|gb|ADQ19216.1| tyrosyl-tRNA synthetase [Leadbetterella byssophila DSM 17132]
          Length = 431

 Score =  268 bits (684), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 157/430 (36%), Positives = 231/430 (53%), Gaps = 28/430 (6%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           F+  L  RG I  I    E  +  ++ + T YIG+D TA SLH G+L  +M+L   Q  G
Sbjct: 3   FIEELRWRGMIQDIMPGTEEQL--NKEMTTGYIGFDPTARSLHIGNLATIMVLKQFQMAG 60

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKP++L+GG T ++GDPS +   R  +  + + EN E IK     F+ +  G+  A ++N
Sbjct: 61  HKPLALVGGATGMVGDPSGKSAERNFLSEETLLENQEGIKKQLEKFLDFNCGENSAEIVN 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W   I ++  LRE G + +VN M S +SV+ R+  E  +SF EF+Y ++Q YD+  L
Sbjct: 121 NYDWFKDISFLQFLREAGKYLTVNYMSSKDSVKRRI--ETGISFTEFSYQLIQGYDYYHL 178

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK----LFALTSPLLTTASGTKMGKTLSG 243
            K    +LQMGGSDQWGNI  G +L  R +        +ALT+PLLT A GTK GK+  G
Sbjct: 179 YKTRGVKLQMGGSDQWGNITTGTELIRRKEGENADYSAYALTTPLLTKADGTKFGKSEGG 238

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT-LPMSEIDRM--AKLQGKEINEAKK 300
            +WL+ E+TSPY F+Q+W N +DAD+    +     L   +I+ +     Q   +  A+K
Sbjct: 239 NVWLDPELTSPYQFYQFWINQNDADLPRLMRVYCCFLSKEQIEAIEAEHAQAPHLRVAQK 298

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDEV 346
            +A E+TTMVHG +  EKA  A+   F  S                 + +P   + K ++
Sbjct: 299 ALAKEVTTMVHGADAYEKAVQASEVLFGKSTVEALKNLDEQTFKEVFEGVPQTKVQKSDL 358

Query: 347 SRGMGLLTLI---VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
           +    LL LI          S  EAR+ L++NA+ +N + I ++KL +   +      I 
Sbjct: 359 TNESNLLELISVLSNGEVYPSKTEARKALQANAVSVNKTKIQDDKLPVNDIELLHGKYIL 418

Query: 404 LSFGKKNHII 413
           L  GKKNHII
Sbjct: 419 LGKGKKNHII 428


>gi|326336235|ref|ZP_08202407.1| tyrosine--tRNA ligase [Capnocytophaga sp. oral taxon 338 str.
           F0234]
 gi|325691744|gb|EGD33711.1| tyrosine--tRNA ligase [Capnocytophaga sp. oral taxon 338 str.
           F0234]
          Length = 432

 Score =  268 bits (684), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 154/431 (35%), Positives = 236/431 (54%), Gaps = 24/431 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG I  I    E  +L  +G+  AY+G D TA SLH GHL  +M+L   Q  
Sbjct: 3   NFVEELRWRGMIQDIMPETEEHLL--EGLRAAYVGIDPTADSLHIGHLVGVMMLRHFQDC 60

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY-GTGKTDALM 125
           GHKP +++GG T +IGDPS +   R ++  + +  NIE IK   + F+ +  T    A +
Sbjct: 61  GHKPYAVIGGATGMIGDPSGKSAERNLLTKETLAHNIEGIKKQLAKFLDFESTAPNRAEL 120

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQS---LSFLEFNYMILQAY 182
           +NN  W   + ++  +R+IG   +VN M++ +SV+ R    ++   +SF EF+Y +LQ +
Sbjct: 121 VNNYDWTKDVSFLSFIRDIGKHITVNYMMAKDSVKKRFDPNENTDGMSFTEFSYQLLQGF 180

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           D++ L +     LQMGGSDQWGNI  G +L  R  + K +ALT PL+T A GTK GK+  
Sbjct: 181 DYLHLFQEKGVTLQMGGSDQWGNITTGTELIRRKVSGKAYALTCPLITKADGTKFGKSEG 240

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEA--KK 300
           G +WL+ E TSPY F+QYW N  D D   + K  T LP  EI+ +  +  +  ++   + 
Sbjct: 241 GNVWLDPEKTSPYKFYQYWINTSDVDAERYIKIFTMLPKGEIETLIMVHREAPHQRILQS 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMS-------IHSQHM-------PTISISKDEV 346
            +A E+T +VHG+EE E A  A+   F  +       + SQ +       P   IS  ++
Sbjct: 301 KLAEELTILVHGKEELENAIRASQILFGNTTSEDLKKLDSQTLLEIFDGVPQAEISLTDL 360

Query: 347 SRGMGLL-TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLS 405
            +G+ ++  L  K GF  S +EARR L  N+I +N   ++ E   +  +D  +   I L 
Sbjct: 361 KKGLDMIGALSAKTGFIKSNSEARRALGENSISVNKEKVT-EDYSLSEKDLLNNQFILLQ 419

Query: 406 FGKKNHIICHL 416
            GKKN+ +  +
Sbjct: 420 RGKKNYFLIRI 430


>gi|220916278|ref|YP_002491582.1| tyrosyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-1]
 gi|254783565|sp|B8JFS8|SYY_ANAD2 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|219954132|gb|ACL64516.1| tyrosyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-1]
          Length = 420

 Score =  267 bits (683), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 152/423 (35%), Positives = 234/423 (55%), Gaps = 19/423 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + L  L  R  +H    P  L    +QG +T Y+G+D TA SLH GHL  +M L WLQ+ 
Sbjct: 3   NLLEALVSRSLVHD-QTP-GLQARLAQGPITGYVGFDPTADSLHVGHLLAVMSLAWLQRC 60

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           G  PI ++GGGT ++GDPS +   R ++  +EI  N+  I+     F+ +  G+  A + 
Sbjct: 61  GGTPIIVVGGGTGMVGDPSGKRSERPVLSVEEIDRNVAAIRAQLERFVSF-EGQNAARVR 119

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL +I  ++ LR++G  F+VN ML+ +SV+ R+  E  +SF EF+Y ++QAYDF  
Sbjct: 120 NNADWLRAIGLMEFLRDVGKHFTVNYMLAKDSVKGRM--ESGISFTEFSYQLIQAYDFWH 177

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L ++  C LQMGGSDQWGNI  G +L  R     +  LT PLLTTASGTK GKT  GA+W
Sbjct: 178 LFRSEKCELQMGGSDQWGNITAGAELVSRKDGASVHGLTFPLLTTASGTKFGKTEGGAVW 237

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIAT 304
           L+   TSPY F+Q+W N DD DV    K  T L + EI  +   Q ++  +  A++ +A 
Sbjct: 238 LDPARTSPYKFFQFWLNTDDRDVERLLKFFTFLSVEEIAALLAEQARDPGKRPAQRRLAE 297

Query: 305 EITTMVHGREEAEKAATAAMECFD-----------MSIHSQHMPTISISKDEVSRGMGLL 353
           ++T  VHG +       A+   F            + + +  +P+ +++ DE++  + + 
Sbjct: 298 DVTARVHGPDVTRSVVEASRILFGGTDLRAASADVLEVLAGEIPSATVTGDELA-ALTVA 356

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            L+VK G A S  E RR +      +N +++ +   ++   D  + G   L  GK+N+ +
Sbjct: 357 DLLVKVGLAASKGEVRRGVAGRGFSLNGAVLESGDAKVAAGDLLAGGYALLQKGKRNYAL 416

Query: 414 CHL 416
             +
Sbjct: 417 VKV 419


>gi|169829622|ref|YP_001699780.1| tyrosyl-tRNA synthetase [Lysinibacillus sphaericus C3-41]
 gi|168994110|gb|ACA41650.1| Tyrosyl-tRNA synthetase [Lysinibacillus sphaericus C3-41]
          Length = 435

 Score =  267 bits (683), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 142/404 (35%), Positives = 238/404 (58%), Gaps = 20/404 (4%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           ++ L  L  RG ++Q ++   +  L  +  V+ Y G D TA S+H GH+  L+ L   QK
Sbjct: 16  NELLQDLEWRGLLYQQTDADGMAKLLEEQSVSLYCGVDPTADSMHIGHIVPLLTLRRFQK 75

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+PI L+GG T +IGDPS R E R++   ++I +N++ I+G       +      A +
Sbjct: 76  AGHRPILLVGGATGMIGDPSGRSEERQLQTVEQIDKNVQGIRGQLERIFDFAEDGNGAQL 135

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  W+ +I  I+ LR+ G   +VN ML+ +++ SRL  +  +SF EF Y ++Q  D+ 
Sbjct: 136 VNNRDWIGNINTIEFLRDYGKLINVNYMLAKDTIASRL--DTGISFTEFAYTLIQGIDYN 193

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERL--KTPKLFALTSPLLTTASGTKMGKTLSG 243
            L  +Y+CR+Q+GGSDQWGNI  G+++  +   +  K F +T PL+T A GTK GKT  G
Sbjct: 194 HLYNHYNCRIQVGGSDQWGNITTGLEVIRKTHEEETKAFGITIPLVTKADGTKFGKTAGG 253

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE--INEAKKI 301
           A+WL+ + TSPY F+Q+W N  DADV+ + K  T L   EI+ +A    +E  + +A+K 
Sbjct: 254 AVWLDGKKTSPYEFYQFWINAADADVIKYLKIFTFLTREEIESLAVSVEEEPHLRKAQKS 313

Query: 302 IATEITTMVHGREEAEKA--ATAAMECFDMSIHS--------QHMPTISISKDEVSRGMG 351
           +A E+T ++HG+   E+A   TAA+   D+   S        + +P+I ++K++ +    
Sbjct: 314 LAEEMTRLIHGQAALEQAIRITAALFSGDLKALSAEEMKDAFKDVPSIEMAKEDKN---- 369

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           ++ L+V+AG ++S  +AR  + + AI +N   +++ +  +  +D
Sbjct: 370 IVDLLVEAGISSSKRQAREDVSNGAISVNGEKVTDLEYVVDAKD 413


>gi|269795517|ref|YP_003314972.1| tyrosyl-tRNA synthetase [Sanguibacter keddieii DSM 10542]
 gi|269097702|gb|ACZ22138.1| tyrosyl-tRNA synthetase [Sanguibacter keddieii DSM 10542]
          Length = 420

 Score =  267 bits (683), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 153/414 (36%), Positives = 231/414 (55%), Gaps = 12/414 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           ++ L  L+ RG I Q ++   L      G VT Y G+D TA SLH GHL QL+LL  LQ 
Sbjct: 2   TNVLDELTWRGLISQTTDMDALREALDGGPVTYYCGFDPTAPSLHHGHLVQLVLLRHLQL 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI-QENIEKIKGIFSSFIKYGTGKTDAL 124
            GH+PI+L+GG T +IGDP    E  R++ S+E+  E +E+++   S F+ +  G   A 
Sbjct: 62  AGHRPIALVGGATGLIGDPRMSGE--RVLNSREVVGEWVERLRSQISRFLDF-DGDNPAQ 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M+NN  W   +  ID LR+IG  + +  ML+ ++V  RL+  + LSF EF+Y ILQ  D+
Sbjct: 119 MVNNLDWTGELTAIDFLRDIGKHYRMGTMLAKDTVARRLESSEGLSFTEFSYQILQGIDY 178

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL + + C LQ GG+DQWGN++ G++L  + +   + ALT+PL+T A GTK GK+  GA
Sbjct: 179 LELNRRHGCTLQTGGNDQWGNLLSGVELVRKSEQRSVHALTTPLITKADGTKFGKSEGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE--INEAKKII 302
           +WL+ EM SPY F+Q+W N DDADVV F K  T     EID +A    +     EA++ +
Sbjct: 239 VWLDPEMMSPYAFYQFWLNADDADVVRFLKIFTFRSAEEIDELAVAVAERPAAREAQRAL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECF---DMSIHSQHMPTISIS---KDEVSRGMGLLTLI 356
           A ++T++VHG    E A  A+   F   ++S   +     +++     E + G  ++ L+
Sbjct: 299 AGDVTSLVHGARATEAAVAASQALFGRGELSALDEATLVAAVAGLPSAEGAPGDLVVDLL 358

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
           V+     S   ARR +    + +NN  +  +   +   D        L  GKK 
Sbjct: 359 VETQLVASKGAARRAVAEGGVYVNNVKVVGDDATLAAADLLQGRAAVLRRGKKT 412


>gi|298694997|gb|ADI98219.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ED133]
          Length = 420

 Score =  267 bits (683), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 144/382 (37%), Positives = 219/382 (57%), Gaps = 20/382 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I+Q ++ + ++ L ++  VT Y G D TA SLH GHL   + L   Q+ GH+PI
Sbjct: 9   LKWRGLIYQQTDEQGIEDLLNKEQVTLYCGADPTADSLHIGHLLPFLTLRRFQEHGHRPI 68

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+GGGT +IGDPS + E R +   +++ +NIE I     +  ++GT    A+++NN  W
Sbjct: 69  VLIGGGTGMIGDPSGKSEERVLQTEEQVDKNIEGISKQMHNIFEFGTDHG-AVLVNNRDW 127

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L  I  I  LR+ G    VN ML  +S++SRL  E  +S+ EF Y ILQA DF  L +  
Sbjct: 128 LGQISLISFLRDYGKHVGVNYMLGKDSIQSRL--EHGISYTEFTYTILQAIDFGHLNREL 185

Query: 192 DCRLQMGGSDQWGNIICGIDLGERL-KTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKE 250
           +C++Q+GGSDQWGNI  GI+L  R+      + LT PL+T + G K GK+ SGA+WL+ E
Sbjct: 186 NCKIQVGGSDQWGNITSGIELMRRMYGQTDAYGLTIPLVTKSDGKKFGKSESGAVWLDAE 245

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKKIIATEITT 308
            TSPY F+Q+W N  D DV+ F K  T L   EIDR+  +K +   + EA+K +A E+T 
Sbjct: 246 KTSPYEFYQFWINQSDEDVIKFLKYFTFLGKEEIDRLEQSKNEAPHLREAQKTLAEEVTK 305

Query: 309 MVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIVK 358
            +HG +    A   +   F   + S          + +P +++S +  +    ++ ++++
Sbjct: 306 FIHGEDALNDAIRISQALFSGDLKSLSAKELKDGFKDVPQVTLSNNTTN----IVEVLIE 361

Query: 359 AGFATSTNEARRHLKSNAIKIN 380
            G + S  +AR  + + AI IN
Sbjct: 362 TGISPSKRQAREDVNNGAIYIN 383


>gi|258424143|ref|ZP_05687025.1| tyrosyl-tRNA synthetase [Staphylococcus aureus A9635]
 gi|257845764|gb|EEV69796.1| tyrosyl-tRNA synthetase [Staphylococcus aureus A9635]
          Length = 420

 Score =  267 bits (683), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 144/379 (37%), Positives = 217/379 (57%), Gaps = 20/379 (5%)

Query: 15  RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLM 74
           RG I+Q ++ + ++ L ++  VT Y G D TA SLH GHL   + L   Q+ GH+PI L+
Sbjct: 12  RGLIYQQTDEQGIEDLLNKEQVTLYCGADPTADSLHIGHLLPFLTLRRFQEHGHRPIVLI 71

Query: 75  GGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCS 134
           GGGT +IGDPS + E R +   +++ +NIE I     +  ++GT    A+++NN  WL  
Sbjct: 72  GGGTGMIGDPSGKSEERVLQTEEQVDKNIEGISKQMHNIFEFGTDHG-AVLVNNRDWLGQ 130

Query: 135 IKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCR 194
           I  I  LR+ G    VN ML  +S++SRL  E  +S+ EF Y ILQA DF  L +  +C+
Sbjct: 131 ISLISFLRDYGKHVGVNYMLGKDSIQSRL--EHGISYTEFTYTILQAIDFGHLNRELNCK 188

Query: 195 LQMGGSDQWGNIICGIDLGERL-KTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTS 253
           +Q+GGSDQWGNI  GI+L  R+      + LT PL+T + G K GK+ SGA+WL+ E TS
Sbjct: 189 IQVGGSDQWGNITSGIELMRRMYGQTDAYGLTIPLVTKSDGKKFGKSESGAVWLDAEKTS 248

Query: 254 PYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKKIIATEITTMVH 311
           PY F+Q+W N  D DV+ F K  T L   EIDR+  +K +   + EA+K +A E+T  +H
Sbjct: 249 PYEFYQFWINQSDEDVIKFLKYFTFLGKEEIDRLEQSKNEAPHLREAQKTLAEEVTKFIH 308

Query: 312 GREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIVKAGF 361
           G E    A   +   F   + S          + +P +++S    +    ++ ++++ G 
Sbjct: 309 GEEALNDAIRISQALFSGDLKSLSAKELKDGFKDVPQVTLSNGTTN----IIDVLIETGV 364

Query: 362 ATSTNEARRHLKSNAIKIN 380
           + S  +AR  + + AI IN
Sbjct: 365 SPSKRQAREDVNNGAIYIN 383


>gi|222152308|ref|YP_002561483.1| tyrosyl-tRNA synthetase [Streptococcus uberis 0140J]
 gi|254783646|sp|B9DSZ3|SYY_STRU0 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|222113119|emb|CAR40521.1| putative tyrosyl-tRNA synthetase [Streptococcus uberis 0140J]
          Length = 418

 Score =  267 bits (683), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 141/397 (35%), Positives = 219/397 (55%), Gaps = 20/397 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG + Q ++   L    ++G V+ Y GYD TA SLH GHL  ++    LQ  GHKP 
Sbjct: 7   LKARGLVFQTTDEEALVKALTEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAGHKPY 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+D  R +   + + E   KIKG  S F+ +  G   A ++NN  W
Sbjct: 67  ALVGGATGLIGDPSFKDAERSLQTKETVLEWSGKIKGQLSQFLDFENGANKAELVNNYDW 126

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
              I +ID LR++G +F+VN M+S +SV+ R+  E  +S+ EF Y I+Q YDF EL + +
Sbjct: 127 FSQISFIDFLRDVGKYFTVNYMMSKDSVKKRI--ETGISYTEFAYQIMQGYDFYELNQKF 184

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
           +  LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WL+ + 
Sbjct: 185 NVTLQIGGSDQWGNMTAGTELLRRKADKTGHVMTVPLITDANGKKFGKSEGNAVWLDADK 244

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATEITTM 309
           TSPY  +Q+W N+ D D + F K  T L + EI  + K      +E  A+K +A E+ T+
Sbjct: 245 TSPYEMYQFWLNVMDEDAIRFLKIFTFLSLEEIAEIEKAFDAARHERLAQKTLAKEVVTL 304

Query: 310 VHGREEAEKAATAAMECFDMSIHS-------QHMPTISISKDEVSRGMGLLTLIVKAGFA 362
           VHG E  ++A     + F  +I +       Q +  +   + +    + ++ ++V +  +
Sbjct: 305 VHGEEAFKQALNITEQLFAGNIKNLSAAELKQGLSNVPNYQVQDEDNLNIVEILVSSSIS 364

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDST 399
            S  +AR  +++ AI +N           ++QD D T
Sbjct: 365 PSKRQAREDVQNGAIYLNGE---------RIQDLDYT 392


>gi|326334271|ref|ZP_08200492.1| tyrosine--tRNA ligase [Nocardioidaceae bacterium Broad-1]
 gi|325947934|gb|EGD40053.1| tyrosine--tRNA ligase [Nocardioidaceae bacterium Broad-1]
          Length = 423

 Score =  267 bits (682), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 157/414 (37%), Positives = 230/414 (55%), Gaps = 17/414 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L  RG I   ++   L    + G V  YIG+D TA SLH G+L Q+ +   LQ+ G
Sbjct: 7   LLDDLEWRGLIADSTDRDALREALAGGSVRFYIGFDPTAPSLHMGNLLQITMAMRLQQAG 66

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQE-IQENIEKIKGIFSSFIKYGTGKTDALML 126
           H P  L+GG T +IGDP  RD   R + S E ++E + K++     F+ +  G+T A M+
Sbjct: 67  HTPYVLVGGATGMIGDP--RDSGERTLNSPETVKEWVGKVRSQIERFVSF-EGETAATMV 123

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W  S+  ID LR+IG  F VNRML+ ++V+ RL  E  +S+ EF+Y++LQ+ D++ 
Sbjct: 124 NNADWTASLSVIDFLRDIGKHFPVNRMLARDTVKKRL--EDGISYTEFSYILLQSMDYLN 181

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + +   LQ GGSDQWGNI  G++L  R+    + A T+PL+T A GTK GKT  GA+W
Sbjct: 182 LFRTHGVSLQFGGSDQWGNITGGVELVRRVTGETVHAFTTPLITKADGTKYGKTEGGALW 241

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE--INEAKKIIAT 304
           L+  M SPY F Q+W N++DA V    +  T L   EI+ +     ++  +  A+K +A 
Sbjct: 242 LDPTMMSPYAFHQFWLNVEDAKVGEMLRVFTFLSHEEIETLEAQHAEKPFLRVAQKALAD 301

Query: 305 EITTMVHGREEAEKAATAAMECF---DMSIHSQHMPTISISKD---EVSRGMGLLT---L 355
            +TT+VHG  E E+A  AA   F   D++  S      +I++    E+ RG  L T   L
Sbjct: 302 HMTTLVHGAGETEQAKQAAAALFGGGDLATLSSTTLAAAITEAGAVELERGEELPTYVDL 361

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
            V AG  +S  EARR +      +NN  + + +  +  ++    G I L  GKK
Sbjct: 362 FVAAGLVSSKGEARRTISEGGAYVNNVRVEDAEGALDEKELLGDGWIVLRRGKK 415


>gi|182414498|ref|YP_001819564.1| tyrosyl-tRNA synthetase [Opitutus terrae PB90-1]
 gi|254783620|sp|B1ZUZ4|SYY_OPITP RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|177841712|gb|ACB75964.1| tyrosyl-tRNA synthetase [Opitutus terrae PB90-1]
          Length = 425

 Score =  267 bits (682), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 149/422 (35%), Positives = 224/422 (53%), Gaps = 13/422 (3%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L  L  RG     ++   L     QG VT Y G+D TA SLH G+L  L+ L   Q  GH
Sbjct: 4   LDDLQWRGLYADCTDLAALTQRLGQGPVTLYCGFDPTADSLHVGNLVPLLALRRFQLHGH 63

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
            PI+L GG T ++GDPS R   R ++   ++  NI  IK     F+ +      A M++N
Sbjct: 64  HPIALAGGATGMVGDPSGRSAERNLLTPDQVAHNIASIKQQLGRFLDFDATTNPARMVDN 123

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
            TW   I +++ LR++G  FSVN ML+ ESVR+RL+ E  +S+ EF+YM+LQA+DF+ L 
Sbjct: 124 STWTAPISFLEFLRDVGKHFSVNAMLAKESVRARLESESGISYTEFSYMLLQAHDFLHLR 183

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
           +  +C LQ+G +DQWGNI  G DL  +      + LT PLLT + GTK GK+ SGA++L+
Sbjct: 184 ETMNCELQVGATDQWGNITAGTDLIRKKLGAPAWGLTFPLLTKSDGTKYGKSTSGAVYLD 243

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM-AKLQGKE-INEAKKIIATEI 306
            + T+PY F+Q++   +DADV+   K LT L   EI  +   L+       A+K +A  +
Sbjct: 244 PKRTTPYRFYQFFVQAEDADVIKLLKVLTFLSAEEITALDTDLKANPGARAAQKALARAV 303

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVS-RGMGLLTL 355
           TT+VHG  E   A  A+   F   +              +PT  +   ++S  G  L+ L
Sbjct: 304 TTLVHGDTECANAIRASEIMFGGGLDGISESLFQDVVGEIPTKELEAAKLSGAGAPLVEL 363

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +V AG A S  +AR+ +    I +NN+ +      +   +      + L  GK+ + +  
Sbjct: 364 LVHAGLAPSKGQARKDIDGGGIYVNNARVGEASRAVTTGELLFGKYLLLRKGKRTYTVVK 423

Query: 416 LC 417
           + 
Sbjct: 424 IV 425


>gi|172040781|ref|YP_001800495.1| hypothetical protein cur_1101 [Corynebacterium urealyticum DSM
           7109]
 gi|171852085|emb|CAQ05061.1| unnamed protein product [Corynebacterium urealyticum DSM 7109]
          Length = 436

 Score =  267 bits (682), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 159/426 (37%), Positives = 236/426 (55%), Gaps = 27/426 (6%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQ--GVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           S+ +  L  RG I   ++  +LD L  Q       Y G+D T  SLHAGHL  L+LL   
Sbjct: 9   SNLVDELQWRGLI---ADSTDLDELREQLKNPTAVYCGFDPTGDSLHAGHLVPLLLLRRF 65

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRR-MMRSQEIQENIEKIKGIFSSFIKY------ 116
           Q  GHK  +L GG T +IGDP  RD   R M+  +++ EN+E IK    +F+ +      
Sbjct: 66  QLAGHKAFALAGGATGMIGDP--RDVGERSMLTEEQVAENVEHIKKQLRAFLLFEGSAEL 123

Query: 117 ---GTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLE 173
              G     A ++NN  W+ ++  I  LR++G  FS+N MLS ++V+ RL  +  +S+ E
Sbjct: 124 EESGKDLHPATLVNNADWIGNMSVIHFLRDLGKNFSLNTMLSRDTVKRRLAAD-GISYTE 182

Query: 174 FNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTAS 233
           F+YM+LQA DFV L + +D  +Q+GGSDQWGNI+ G+DL  R+    +  LT PL+T + 
Sbjct: 183 FSYMLLQANDFVHLHREHDVCVQVGGSDQWGNIVSGVDLVRRMDGDSVHGLTVPLVTDSE 242

Query: 234 GTKMGKTLSGA-IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG 292
           G K GK+  G  +WL+ E+TSPY+++QY+ N  DADVV F +  T L   EIDR+A    
Sbjct: 243 GKKFGKSTGGGNLWLDPELTSPYSWYQYFFNTADADVVKFLRMFTFLDREEIDRLAVEVA 302

Query: 293 KEI--NEAKKIIATEITTMVHGREEAEKAATAAMECF---DMSIHSQHMPTISISKDEVS 347
           +     EA++++A E+T +VHG +   K   AA   F   D+S   +     ++ +  V+
Sbjct: 303 ERPFKREAQRVLAQEMTALVHGEDAVGKVELAAQALFGRADLSHLDEQTLAAALQETTVA 362

Query: 348 R---GMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
               G  L+ L+V AG   S   ARR +K     +NN  I + +  + ++D    G + L
Sbjct: 363 EGAVGASLVELLVAAGLEKSNGAARRTIKEGGAYVNNERIDDAEWTVSVEDLLVGGWLVL 422

Query: 405 SFGKKN 410
             GKKN
Sbjct: 423 RKGKKN 428


>gi|254821549|ref|ZP_05226550.1| tyrosyl-tRNA synthetase [Mycobacterium intracellulare ATCC 13950]
          Length = 420

 Score =  267 bits (682), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 154/415 (37%), Positives = 231/415 (55%), Gaps = 18/415 (4%)

Query: 11  ILSERGFIHQISNPRELDILCSQ---GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           IL E G+   I+   +LD L ++   G +T Y G+D TA SLHAGHL  L+ L   Q+ G
Sbjct: 2   ILDELGWRGLIAQSTDLDALAAEARRGPMTVYAGFDPTAPSLHAGHLVPLLALRRFQRAG 61

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQE-IQENIEKIKGIFSSFIKYGTGKTDALML 126
           H+PI L GG T +IGDP  RD   R +   + + E  E+I G    F+ +    T A+++
Sbjct: 62  HRPIVLAGGATGMIGDP--RDVGERTLNEADTVAEWTERIGGQLQRFVDFDDSPTGAVVV 119

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   +  I+ LR+IG  FSVN ML  ++VR RL  +  +S+ EF+YM+LQA D+VE
Sbjct: 120 NNLDWTRPLSAIEFLRDIGKHFSVNVMLDRDTVRRRLDGD-GISYTEFSYMLLQANDYVE 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK-TLSGAI 245
           L + Y CRLQ+GGSDQWGNII G+ L  +     + ALT PL+T A GTK GK T  G++
Sbjct: 179 LHRRYGCRLQIGGSDQWGNIIAGVRLVRQQLGASVHALTVPLVTAADGTKFGKSTGGGSL 238

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKKIIA 303
           WL+  +T+PY ++QY+ N  DADV+ + +  T L   E+  +  A  +  +   A++ +A
Sbjct: 239 WLDPALTTPYAWYQYFFNTADADVIRYLRWFTFLSADELGELEQATAERPQQRAAQRRLA 298

Query: 304 TEITTMVHGREEAEKAATAAMECF--------DMSIHSQHMPTISISKDEVSRGMGLLTL 355
            E+T +VHG    E    A+   F        D +  S  +   S+++ +     G++ L
Sbjct: 299 RELTVLVHGEAATEAVEHASRALFGQGELGRLDEATLSAALRETSVAELKPGGPDGIVDL 358

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
           +V +G + S   ARR +    + +NN  I +E+   +  DF     + L  GK+ 
Sbjct: 359 LVASGLSESRKAARRTIGEGGVSVNNVRIESEEWAPQPADFLHGRWLVLRRGKRT 413


>gi|229497108|ref|ZP_04390812.1| tyrosyl-tRNA synthetase [Porphyromonas endodontalis ATCC 35406]
 gi|229316033|gb|EEN81962.1| tyrosyl-tRNA synthetase [Porphyromonas endodontalis ATCC 35406]
          Length = 431

 Score =  267 bits (682), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 146/430 (33%), Positives = 241/430 (56%), Gaps = 24/430 (5%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +DF+  L  RG +H I    E  +  S+ + TAY+G D TA SLH GHL  +M+L   Q+
Sbjct: 2   NDFVEELRWRGMLHNIMPGTEEQL--SKELSTAYVGIDPTADSLHIGHLVGVMMLRHFQR 59

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL- 124
            GH+PI+L+GG T +IGDPS +   R ++  + ++ N E I    + F+ + + + +A  
Sbjct: 60  FGHRPIALLGGATGMIGDPSMKSAERNLLSLETLRHNQEAIGKQLAKFLDFDSEQPNAAK 119

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQAY 182
           ++NN  W+   +++D +RE+G   +VN M++ +SV+ R +      LSF EF+Y +LQ Y
Sbjct: 120 LVNNYDWMSEWRFLDFIREVGKHITVNYMMAKDSVKKRFEGTAGSGLSFTEFSYQLLQGY 179

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           D++ L ++ +CRLQMGGSDQWGNI  G +L  R++  + FALT PL+T A G K GKT  
Sbjct: 180 DYLYLYRHENCRLQMGGSDQWGNITTGTELIRRIEGGEAFALTCPLITKADGGKFGKTEK 239

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKK 300
           G +WL++  TSPY F+Q+W N+ D D   + K  T L   EI+ +   Q     +   ++
Sbjct: 240 GNVWLDRRYTSPYAFYQFWLNVSDEDAARYIKIFTFLGKEEIEDLVAQQAAAAHLRPLQR 299

Query: 301 IIATEITTMVHGREEAEKAATA-----------AMECFD----MSIHSQHMPTISISKDE 345
            +A E+T +VH RE+ E A +A           A+   D    +S+  + +P  SI++D 
Sbjct: 300 RLAEELTVLVHSREDYEAAVSASEILFGNGTADALRSLDEEMLLSV-MEGVPHFSIARDT 358

Query: 346 VSRGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           ++     + L  + A    S  E R+ +KS  + +N + +++ +  +   D  +   + +
Sbjct: 359 LATQPKAVDLFTEGAAIFPSKGELRKLIKSGGVSLNKAKLTDTEATVSASDLIAGRYLLV 418

Query: 405 SFGKKNHIIC 414
             GKK + + 
Sbjct: 419 QRGKKQYYLV 428


>gi|315655592|ref|ZP_07908490.1| tyrosine--tRNA ligase [Mobiluncus curtisii ATCC 51333]
 gi|315489656|gb|EFU79283.1| tyrosine--tRNA ligase [Mobiluncus curtisii ATCC 51333]
          Length = 425

 Score =  267 bits (682), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 146/415 (35%), Positives = 238/415 (57%), Gaps = 13/415 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           SD +  L+ RG I Q ++   L    S+G +T Y G+D TA+SLH GHL QL+++  LQ 
Sbjct: 7   SDLIDELTWRGLIKQHTDMDALRRALSEGPLTFYCGFDPTAASLHHGHLVQLIMMRHLQL 66

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH PI+L+GG T +IGDP    E R++   + +    ++++     F+ +  G+  A M
Sbjct: 67  AGHHPIALVGGATGLIGDPRMTAE-RQLQDKETVAGWADRLQRQIERFLDF-EGENPARM 124

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  W   +  IDLLR++G  F +  ML+ ++V  RLK ++ +SF EF+Y ILQA D++
Sbjct: 125 VNNLEWTAPLSAIDLLRDLGKNFRMGTMLAKDAVARRLKSDEGISFTEFSYQILQANDYL 184

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           +L + Y   L+ GG+DQWGN++ G+DL  +++   +  +T+PL+T + GTK GK+  GAI
Sbjct: 185 QLYRKYGVTLETGGNDQWGNLVGGMDLIRKIEGKDVHVMTTPLITKSDGTKFGKSEGGAI 244

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE---INEAKKII 302
           WL+ EM SPY F+Q+W N +DADVV+  K  T L   EI+ + +++ KE      A++ +
Sbjct: 245 WLDPEMFSPYAFYQFWLNTEDADVVNLLKVFTFLSREEIEAL-EIETKENPGKRAAQRAL 303

Query: 303 ATEITTMVHGREEAEKAATAAMECF------DMSIHSQHMPTISISKDEVSRGM-GLLTL 355
           A  +TT+VHG ++ E+   A+   F      ++   +    T+ + + +V  G   +L L
Sbjct: 304 AEAVTTLVHGADQTERVKAASTALFGRGDLREVDGKTLVAATVDLPRSQVVLGQTNILHL 363

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
           +V +G       A+R + S    +NN  + +E   I  +D    G +    GK+ 
Sbjct: 364 LVDSGLEKGIGAAKRTVASGGAYLNNEKVEDEGRVITAEDMLPGGVVLFRKGKRQ 418


>gi|149181085|ref|ZP_01859585.1| tyrosyl-tRNA synthetase [Bacillus sp. SG-1]
 gi|148851172|gb|EDL65322.1| tyrosyl-tRNA synthetase [Bacillus sp. SG-1]
          Length = 420

 Score =  267 bits (682), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 150/388 (38%), Positives = 218/388 (56%), Gaps = 20/388 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D L  L  RG  +Q ++   L  L  +  ++ Y G D TA S+H GHL   + L   Q  
Sbjct: 2   DLLKDLEWRGITYQQTDEEGLKNLLDKEKISIYCGIDPTADSMHIGHLLPFLTLRRFQNQ 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+P+ L+GG T +IGDPS + E R++   + IQ N+E IK    S   +  G+T A+M+
Sbjct: 62  GHRPLVLVGGATGLIGDPSGKSEERKLQTVESIQHNVECIKSQLKSIFDF-EGETGAVMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W+  +  +  LR+ G    VN ML+ +++ SRL  E  +S+ EF Y ILQA DF  
Sbjct: 121 NNFDWIGPMDMVTFLRDFGKHIGVNYMLAKDTIASRL--ETGISYTEFTYTILQAMDFNH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSGA 244
           L +NY+C+LQ+GGSDQWGNI  G++L  R +    K F  T PL+T A G+K GKT SGA
Sbjct: 179 LYENYNCKLQIGGSDQWGNITTGLELIRRTREEESKAFGFTIPLVTKADGSKFGKTESGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE--INEAKKII 302
           IWL+ E TSPY F+Q+W N  DADVV + K  T L   EI+ +A+    E  + +A+K +
Sbjct: 239 IWLDPEKTSPYEFYQFWINTADADVVKYLKYFTFLSHEEIEALAETVETEPHLRKAQKAL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGL 352
           A E+T ++HG E   +A       F  +I            + +P+ + S +E    + L
Sbjct: 299 AEEMTKLIHGEEALAQAIKITEALFSGNIKELSSAEIKQGFKDVPSFTQSTEEE---INL 355

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKIN 380
           + L+V    + S  +AR  + + AI IN
Sbjct: 356 VDLLVNTKISPSKRQAREDIGNGAIYIN 383


>gi|242374020|ref|ZP_04819594.1| tyrosyl-tRNA synthetase [Staphylococcus epidermidis M23864:W1]
 gi|242348271|gb|EES39873.1| tyrosyl-tRNA synthetase [Staphylococcus epidermidis M23864:W1]
          Length = 420

 Score =  267 bits (682), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 143/379 (37%), Positives = 217/379 (57%), Gaps = 20/379 (5%)

Query: 15  RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLM 74
           RG I+Q ++ + ++ L ++  VT Y G D TA SLH GHL   + L   Q+ GH+PI L+
Sbjct: 12  RGLIYQQTDEQGIEDLLNKEQVTLYCGADPTADSLHIGHLLPFLTLRRFQEHGHRPIVLI 71

Query: 75  GGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCS 134
           GGGT +IGDPS + E R +    +++ N++ +        ++GT K  A+++NN+ WL  
Sbjct: 72  GGGTGMIGDPSGKSEERVLQTEDQVEANVQGLSKQMHRLFEFGTDKG-AVLVNNKDWLGQ 130

Query: 135 IKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCR 194
           I  I  LR+ G    VN ML  +S+++RL  E  +S+ EF Y ILQA DF  L +  +C+
Sbjct: 131 ISLISFLRDYGKHVGVNYMLGKDSIQTRL--EHGISYTEFTYTILQAIDFGHLNRELNCK 188

Query: 195 LQMGGSDQWGNIICGIDLGERL-KTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTS 253
           +Q+GGSDQWGNI  GI+L  R+    + F LT PL+T + G K GK+ SGA+WL+ E TS
Sbjct: 189 IQVGGSDQWGNITSGIELMRRMYGQTEAFGLTIPLVTKSDGKKFGKSESGAVWLDPEKTS 248

Query: 254 PYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKKIIATEITTMVH 311
           PY F+Q+W N  D DV+ F K  T L   EIDR+  +K +   + EA+K +A  +T  +H
Sbjct: 249 PYEFYQFWINQSDEDVIKFLKYFTFLDKEEIDRLEQSKEEAPHLREAQKALAENVTKFIH 308

Query: 312 GREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIVKAGF 361
           G E    A   +   F   + S          + +P +++S    S    ++  +++ G 
Sbjct: 309 GEEALNDAIRISKALFSGDLKSLSGKELKEGFKDVPQVTLS----SETTNIIEALIETGI 364

Query: 362 ATSTNEARRHLKSNAIKIN 380
           A+S  +AR  + + AI IN
Sbjct: 365 ASSKRQAREDVNNGAIYIN 383


>gi|227833163|ref|YP_002834870.1| Tyrosyl-tRNA synthetase [Corynebacterium aurimucosum ATCC 700975]
 gi|227454179|gb|ACP32932.1| Tyrosyl-tRNA synthetase [Corynebacterium aurimucosum ATCC 700975]
          Length = 461

 Score =  267 bits (682), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 159/422 (37%), Positives = 236/422 (55%), Gaps = 20/422 (4%)

Query: 4   FKSDFLSILSE---RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           FK  F++I+ E   RG I+Q ++   L   C +  +T Y G+D T  SLHAGHL  +++L
Sbjct: 38  FKGAFMNIIDELQWRGLINQSTDLDALREACEE-PITLYCGFDPTGDSLHAGHLVPMIML 96

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQE-IQENIEKIKGIFSSFIKYGTG 119
              QK GH PI+L GG T  IGDP  RD   R M SQE I +N+  IK     FI +  G
Sbjct: 97  RRFQKAGHHPIALAGGATGQIGDP--RDVGERTMLSQETINDNMVAIKKQLRQFIDF-AG 153

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
           +  A M+NN  W   +  ID LR++G  FS+N ML  ++V+ RL+ +  +S+ EF+YM+L
Sbjct: 154 ENAATMVNNADWTSKMTVIDFLRDVGKNFSLNTMLDRDTVKRRLESD-GISYTEFSYMLL 212

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK 239
           Q+ D+V L   +DC LQ+GG DQWGNI+ G+DL  R+K  K+  LT PL+T A G K GK
Sbjct: 213 QSNDYVHLHDEFDCILQIGGGDQWGNIVSGVDLNRRVKGAKVHGLTVPLVTDAQGQKFGK 272

Query: 240 TLSGA-IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--N 296
           +  G  +WL+ E TSPY+++QY+ N  D+ V+ + +  T L   EI    +   +E    
Sbjct: 273 STGGGKLWLDPEKTSPYSWYQYFLNAGDSVVIDYLRWFTFLSQEEIAEYEQKVAEEPFRR 332

Query: 297 EAKKIIATEITTMVHGREEAE--KAATAAM----ECFDMSIHS--QHMPTISISKDEVSR 348
           EA++ +A E+T +VHG E  +  K AT A+    E  D+   +    +   +++      
Sbjct: 333 EAQRRLAQEMTNLVHGEEATKSVKLATQALFGKAELADLDEQTLVGALSETTVADIAAGE 392

Query: 349 GMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGK 408
              ++ L+V  G A S   ARR +K     +NN  I +++ +   +D      + L  GK
Sbjct: 393 PRTIVDLLVACGLADSKGAARRTIKEGGAYVNNQRIESDEWEPAAEDLLHGAWLVLRRGK 452

Query: 409 KN 410
           KN
Sbjct: 453 KN 454


>gi|303281116|ref|XP_003059850.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226458505|gb|EEH55802.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 430

 Score =  267 bits (682), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 152/430 (35%), Positives = 233/430 (54%), Gaps = 23/430 (5%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           + +L ERG +   +N  EL      G ++ Y G+D TA SLH G+L  +++L W Q+ GH
Sbjct: 2   VDVLRERGLLDACTNEDELREAAGDGSLSVYCGFDPTADSLHLGNLLGIVVLAWFQRCGH 61

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN---IEKI-KGIFS---SFIKYGTGKT 121
            PI+L+GG T  +GDPS +   R ++    I  N   IEKI +G+ +   SF   G    
Sbjct: 62  TPIALLGGATGRVGDPSGKSAERPVLDDVTINANVAGIEKILRGVLANSASFAPPGDELK 121

Query: 122 DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA 181
            A +LNN  W   + +++ LR++G +  V  M++ +SV+SRL+ E+ +SF EF+Y +LQ 
Sbjct: 122 PARVLNNLDWFGGMGFLEFLRDVGKYARVGTMVAKDSVKSRLESERGMSFTEFSYQLLQG 181

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL--KTPKLFALTSPLLTTASGTKMGK 239
           YDFV L +  +  +Q+GGSDQWGNI  G DL  R+  +    + LT PLL  A G K GK
Sbjct: 182 YDFVHLHREENVMVQVGGSDQWGNITAGTDLIRRISQRDGGAYGLTFPLLLKADGKKFGK 241

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEIN 296
           +  GA+WL+ +  SPY F+Q+     DADVV F K LT +P+ EI+ M    K  G   N
Sbjct: 242 SEDGAVWLSPDRLSPYKFYQHLLQSTDADVVRFMKTLTFVPIEEIEAMEAAMKEDGYAPN 301

Query: 297 EAKKIIATEITTMVHGR----------EEAEKAATAAMECFDMSIHSQHMPTISISKDEV 346
            A+K +A E+T  VHG           E  +  A   ++   +   +  +P+  +S  EV
Sbjct: 302 TAQKRLAEEVTRFVHGEAGLSQALKATEGLKPGADTVLDADTLEALAGDIPSAELSLGEV 361

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
             G  ++ ++   G   S  EA+R +K    ++NN  + +E   I+  D      + L+ 
Sbjct: 362 V-GRTVVDVMAATGLQKSKGEAKRLIKGGGARVNNVKVEDEGKVIEEGDVVDGRVLLLAA 420

Query: 407 GKKNHIICHL 416
           GKKN ++  +
Sbjct: 421 GKKNKLLVRV 430


>gi|330467036|ref|YP_004404779.1| tyrosyl-tRNA synthetase [Verrucosispora maris AB-18-032]
 gi|328810007|gb|AEB44179.1| tyrosyl-tRNA synthetase [Verrucosispora maris AB-18-032]
          Length = 435

 Score =  267 bits (682), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 147/418 (35%), Positives = 221/418 (52%), Gaps = 14/418 (3%)

Query: 2   PAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
           PA +  F   L  RG I   ++P EL  L        Y+G+D TA SLH GHL Q+    
Sbjct: 10  PAGRDSFTDDLRWRGLIQDSTDPDELRALLDGPAAVFYVGFDPTAPSLHVGHLMQVATAR 69

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN-IEKIKGIFSSFIKYGTGK 120
            LQ  GH+P+ L+GG T  IGDP  ++ + R +   E+    +++I+   + F+ Y TG 
Sbjct: 70  RLQLAGHRPLLLVGGATGQIGDP--KESAERTLNPPEVVAGWVQRIRDQLAPFVSY-TGD 126

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
             AL++NN  W   +  ++ LR++G  F VN+ML+ E VR+RL  E  +SF EF+Y +LQ
Sbjct: 127 NAALLVNNLEWTGEMSVVEFLRDVGKHFPVNKMLAREVVRARL--ESGISFTEFSYQLLQ 184

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           A DF EL + + C+LQ GGSDQWGNI  G+D   R     + A T+PL+T + G+K GKT
Sbjct: 185 ANDFFELHRRHGCQLQFGGSDQWGNITAGVDYVRRRGAGPVQAFTTPLVTKSDGSKFGKT 244

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEA 298
             GAIWL+ EMTSPY F+Q+W N+DD DV  + +  +     E++ + K   +      A
Sbjct: 245 EGGAIWLDPEMTSPYAFYQFWINVDDRDVGRYLRYFSFRSREELEALEKETAERPASRAA 304

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECF------DMSIHSQHMPTISISKDEVSRGMGL 352
           ++ +A E+TT+VHG  E  +   A+   F      D+S  +            + +    
Sbjct: 305 QRALAEELTTLVHGEREMAQVVAASQALFGRGSLADLSAATLRAALTEAGLVRLDKLPEA 364

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
             L+ ++G   S  EARR +      +NN  ++     I   D      + L  GK++
Sbjct: 365 AALLKESGLVPSMKEARRVIAEGGAYVNNVRVTEADAVIGADDLLHGRYLVLRRGKRS 422


>gi|224476819|ref|YP_002634425.1| tyrosyl-tRNA synthetase [Staphylococcus carnosus subsp. carnosus
           TM300]
 gi|254783637|sp|B9DN75|SYY_STACT RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|222421426|emb|CAL28240.1| tyrosyl-tRNA synthetase [Staphylococcus carnosus subsp. carnosus
           TM300]
          Length = 420

 Score =  267 bits (682), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 148/399 (37%), Positives = 222/399 (55%), Gaps = 12/399 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           ++ L  L  RG I+Q ++   L+ + ++  VT Y G D TA S+H GHL  L+ L   Q 
Sbjct: 3   NELLKDLEWRGLIYQQTDAEGLENILNKEQVTLYCGVDPTADSMHIGHLLPLLTLRRFQN 62

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKPI L+GGGT +IGDPS + + R +   +++++N+  I         + +GK  A +
Sbjct: 63  HGHKPIVLIGGGTGMIGDPSGKTDERVLQTEEQVEQNVRGIGNQMDKIFDF-SGKEAAQL 121

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  WL  I  ID LR+ G    VN ML  +SV+SRL  E  +S+ EF YMILQA DF 
Sbjct: 122 VNNRDWLGKISLIDFLRDYGKHVGVNYMLGKDSVQSRL--ENGISYTEFTYMILQAIDFG 179

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERL-KTPKLFALTSPLLTTASGTKMGKTLSGA 244
            L + Y+C++Q+GGSDQWGNI  GI+L  R+    + + +T PL+T A G K GK+ +G 
Sbjct: 180 HLNREYNCKVQIGGSDQWGNITSGIELMRRMYGQTEAYGITIPLVTKADGKKFGKSEAGT 239

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKKII 302
           +WL+ E TSPY  +Q+W N  DADV+ F K  T L   EI+R+  +K +   + EA+K +
Sbjct: 240 VWLDAEKTSPYELYQFWINTTDADVIKFLKYFTFLDKEEIERLEQSKEEAPHLREAQKAL 299

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI-----SISKDEVSRG-MGLLTLI 356
           A  +   +HG      A   +   F   + +     +      + + EVS     ++  I
Sbjct: 300 AENVVRFIHGEGALNDAIRISEALFSGDLKALSSDELREGFKDVPQAEVSNATTNIVDFI 359

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           V+AG ++S  +AR  + + AI IN     + K +I   D
Sbjct: 360 VEAGISSSKRQAREDVSNGAIYINGEREQDLKYEISEAD 398


>gi|260769578|ref|ZP_05878511.1| tyrosyl-tRNA synthetase [Vibrio furnissii CIP 102972]
 gi|260614916|gb|EEX40102.1| tyrosyl-tRNA synthetase [Vibrio furnissii CIP 102972]
          Length = 420

 Score =  267 bits (682), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 154/405 (38%), Positives = 225/405 (55%), Gaps = 31/405 (7%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L+ RG I Q ++  EL  L S+   T Y G+D TA SLH GHL  L++L   Q  GH+ I
Sbjct: 10  LTARGLIAQSTSLDELTALFSE-PQTLYCGFDPTAGSLHIGHLVPLLMLKRFQDAGHQAI 68

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKG-IFSSFIKYGTGKTDALMLNNET 130
           +L+GG T +IGDPSF+   R +  +Q +Q+ ++ ++  I  +   + T     +  NN  
Sbjct: 69  ALIGGATGMIGDPSFKATERTLNSAQTVQQWVDDLRQQITHTMTPHLTQPLRCV--NNAD 126

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDFVELAK 189
           W   +  ID  R+IG  FSVN M++ ESV+ RL R +Q +SF EF+Y +LQ++DF  L +
Sbjct: 127 WTGQVNVIDFFRDIGKHFSVNAMINRESVKQRLARPDQGISFTEFSYSLLQSFDFAHLNR 186

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
            + CRLQ+GG+DQWGNI+ GIDL  RL    +  LT PL+T + GTK GKT  GA+WL+ 
Sbjct: 187 EHQCRLQIGGNDQWGNIVSGIDLTRRLNNETVHGLTLPLITKSDGTKFGKTEGGAVWLDA 246

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM----AKLQGKEINEAKKIIATE 305
             TSPY F+Q+W N DDADV  F +  T L + EI R+    A   GK   +A++I+A  
Sbjct: 247 SKTSPYAFYQFWLNTDDADVYRFLRYYTFLSVDEIARIEAEDAARSGKP--QAQQILAEN 304

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDE-------------VSRGMGL 352
           IT  VHG      A   +   F  ++         +S+DE             VS    +
Sbjct: 305 ITAFVHGEAGLASAQRISDALFSGAV-------AQLSRDELAQLELDGLPCTTVSTADDV 357

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
           + L++ +  A+S  +AR  L + AI++N   +++  L      FD
Sbjct: 358 VELLIASQLASSKRQAREWLANGAIRVNGEKMADADLSHSFALFD 402


>gi|219682052|ref|YP_002468436.1| tyrosyl-tRNA synthetase [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
 gi|254783577|sp|B8D726|SYY_BUCAT RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|219621785|gb|ACL29941.1| tyrosyl-tRNA synthetase [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
 gi|311085865|gb|ADP65947.1| tyrosyl-tRNA synthetase [Buchnera aphidicola str. LL01
           (Acyrthosiphon pisum)]
 gi|311086435|gb|ADP66516.1| tyrosyl-tRNA synthetase [Buchnera aphidicola str. TLW03
           (Acyrthosiphon pisum)]
 gi|311087018|gb|ADP67098.1| tyrosyl-tRNA synthetase [Buchnera aphidicola str. JF99
           (Acyrthosiphon pisum)]
          Length = 422

 Score =  267 bits (682), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 153/387 (39%), Positives = 220/387 (56%), Gaps = 17/387 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+S L  RG I  I+N   L  L     ++ Y G+D T  SLH GHL  L++L   Q  
Sbjct: 5   NFISRLHNRGLISHITNEDNLSKLIENKSISLYCGFDPTEESLHIGHLLPLIMLKRFQIA 64

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI L+GG TS+IGDPSF+++ R    +  +    EKI    S F+ +  GK  A++L
Sbjct: 65  GHRPIILIGGATSLIGDPSFKEKERVFNSNYNVNIWTEKITKQISCFLDFNCGKNSAVLL 124

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDFV 185
           NN TW   I  +  LR++G +FSVN M++  +V+ R+ R +Q +SF EF+Y +LQAYDF 
Sbjct: 125 NNNTWFKQINILSFLRDVGKYFSVNTMINRAAVKQRITRPDQGISFTEFSYNLLQAYDFF 184

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L + Y   LQ+GG+DQWGNI  G+ L  R     ++ LT PLL  ++G K GKT SG +
Sbjct: 185 ILNQQYQVDLQIGGADQWGNISSGMHLIHRKTKRVVYGLTVPLLIQSNGIKFGKTESGTV 244

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKKIIA 303
           WL+   TSPY F+Q+W NI+DA+V  F K  T + +SEI+++   K    +I   K ++A
Sbjct: 245 WLDSNKTSPYKFYQFWMNIEDANVYYFLKLFTFIKVSEINKLEKNKNINNQIINDKSLLA 304

Query: 304 TEITTMVHGREE---AEKAA-------TAAMECFDMSIHSQHMPTISISKDEVSRGMGLL 353
             IT +VHG+E+   AE+         T  +E  D+    Q +    I   EVS    L 
Sbjct: 305 KHITQLVHGKEKLLAAERITKFLFLKNTTHIEESDL----QQLKQDGIPFIEVSNVKDLQ 360

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKIN 380
             +V    A S  +A+  + SN+I IN
Sbjct: 361 EALVLTSLAQSRTQAKNMIISNSISIN 387


>gi|319900644|ref|YP_004160372.1| tyrosyl-tRNA synthetase [Bacteroides helcogenes P 36-108]
 gi|319415675|gb|ADV42786.1| tyrosyl-tRNA synthetase [Bacteroides helcogenes P 36-108]
          Length = 430

 Score =  266 bits (681), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 151/428 (35%), Positives = 230/428 (53%), Gaps = 22/428 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG +H +  P   ++L  +  VTAYIG+D TA SLH GHL  +M+L   Q+ 
Sbjct: 2   NFVEELRWRGMLHDMM-PGTEELLAKE-QVTAYIGFDPTADSLHIGHLCSVMILRHFQRC 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD-ALM 125
           GHKP++L+GG T +IGDPS +   R ++  + +  N+E +K   + F+ + +   + A +
Sbjct: 60  GHKPLALIGGATGMIGDPSGKSAERNLLTEEILHHNMEGMKKQLAKFLDFESDAPNRAEL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQAYD 183
           +NN  W+ +  ++D  RE+G   +VN M++ +SV+ RL  E    LSF EF Y +LQ YD
Sbjct: 120 VNNYDWMKNFSFLDFAREVGKHITVNYMMAKDSVKKRLNGEARDGLSFTEFTYQLLQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ L +   CRLQMGGSDQWGNI  G +L  R    ++FALTSPL+T A G K GKT SG
Sbjct: 180 FLHLYETKGCRLQMGGSDQWGNITTGAELIRRTNGGEVFALTSPLITKADGGKFGKTESG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKKI 301
            IWL+   TSPY F+Q+W N+ DAD   + K  T L   EI+ +         +   +K 
Sbjct: 240 NIWLDPRYTSPYKFYQFWLNVSDADAARYIKIFTALSKEEIEALISEHEAAPHLRVLQKR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDEVS 347
           +A E+T MVH  E+   A  A+   F  +                 + +P   +S++ +S
Sbjct: 300 LAKEVTIMVHSEEDYNAAVDASGILFGNATSEALRKLDEDTLLAVFEGVPQFEVSREALS 359

Query: 348 RGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+  + L V+ A    S  E R+ ++   + +N   +      I   D      + +  
Sbjct: 360 AGVKAVDLFVEDAAVFASKGEMRKLVQGGGVSLNKEKLEAFDRVITSADLLDEKYLLVQR 419

Query: 407 GKKNHIIC 414
           GKKN+ + 
Sbjct: 420 GKKNYYLV 427


>gi|239905130|ref|YP_002951869.1| tyrosyl-tRNA synthetase [Desulfovibrio magneticus RS-1]
 gi|239794994|dbj|BAH73983.1| tyrosyl-tRNA synthetase [Desulfovibrio magneticus RS-1]
          Length = 425

 Score =  266 bits (681), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 156/418 (37%), Positives = 227/418 (54%), Gaps = 14/418 (3%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           LS RG +HQ S+  EL    S      Y G+D TA SLH G+L  LM L    K GHKP+
Sbjct: 7   LSWRGLVHQCSDEAELRKHLSSRDRVMYCGFDPTADSLHIGNLVPLMALARFAKAGHKPL 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+GG T +IGDPS +D+ R+M  +  +  + EKI+    +F +          +NN  W
Sbjct: 67  FLLGGATGLIGDPSGKDKERQMRTADMVAASAEKIRSQAMAFFERQGVADRVTPVNNLDW 126

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQS-LSFLEFNYMILQAYDFVELAKN 190
              I  I+ LR+ G  F++N M++ +SV+SR+ RE + +S+ EF+YMILQ+ D+  L + 
Sbjct: 127 TQPISVIEFLRDTGKHFTINYMMAKDSVKSRIGREDTGISYTEFSYMILQSLDYEYLNRT 186

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKE 250
             C LQ+GG DQ+GNI  G++L  R    + FALT PL+TTA+G K GK+  GAI+LN  
Sbjct: 187 MGCTLQIGGGDQFGNITAGLELIRRKSGSQAFALTFPLITTATGAKFGKSEKGAIYLNTA 246

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA--KLQGKEINEAKKIIATEITT 308
           +TSPY F+QYW N DD DV +F +  T L    ID +A    +   +  A+K +A E TT
Sbjct: 247 LTSPYAFYQYWINADDRDVCNFLRYFTYLSKEAIDALAVETAERPHLRAAQKTLARETTT 306

Query: 309 MVHGREEAEKAATAAMECFD---------MSIHSQHMPTISISKDEVSRGMGLLTLIVKA 359
           M+HG EE  K        F           ++ +        + D +     L  L+V  
Sbjct: 307 MIHGAEELAKVEAVTEALFGGGDLRTVDAATLRAALDAAPGKNYDALDVVPPLPKLLVDL 366

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK-LSFGKKNHIICHL 416
               S ++AR+ +K+  I +NN  +++E   +   D+   GNI  L  GKKN+ +  L
Sbjct: 367 ALCPSLSQARKDIKAGGIYLNNVRVADENQTLAASDYIG-GNIALLRKGKKNYGVVTL 423


>gi|83595896|gb|ABC25257.1| tyrosyl-tRNA synthetase [uncultured marine bacterium Ant4E12]
          Length = 435

 Score =  266 bits (681), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 152/419 (36%), Positives = 226/419 (53%), Gaps = 13/419 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + L+ L  RG IH  ++  EL    + G VT Y G+D TA SLH G+L  L+ L   Q  
Sbjct: 14  EILADLQARGLIHDTTDIEELGRQLAAGSVTLYCGFDPTADSLHVGNLIGLLTLRRFQMA 73

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PISL GG T +IGDPS +   R ++    + EN+E I      F+ +  G   A +L
Sbjct: 74  GHRPISLAGGATGMIGDPSGKSSERNLLDDSGLAENLEGIVPQLRQFLDF-DGPCAAKLL 132

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           +N  W   +  +D LR+IG   +VN+ML+ +SV++R+     +S+ EF+YM+LQ YD++ 
Sbjct: 133 DNRAWTVGVSVLDFLRDIGKHVTVNQMLAKDSVKNRMNDGDGISYTEFSYMLLQGYDYLW 192

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG-AI 245
           LA+N  C LQ+GGSDQWGNII GIDL  R       ALT PLLT   G+K GKT  G  I
Sbjct: 193 LAENEGCALQVGGSDQWGNIILGIDLIRRKLGKSAHALTWPLLTKPDGSKYGKTAGGETI 252

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIA 303
           WL+    SPY F+Q W  ++DA+V     +LT L + E+D +AK    +      ++ +A
Sbjct: 253 WLSANKMSPYRFYQSWIGVEDAEVKKLLLQLTFLSVDEVDSLAKAHESDPGSRIGQRTLA 312

Query: 304 TEITTMVHGREEAEKAATAAMECFDM-----SIHSQHMPTISI---SKDEVSRGMGLLTL 355
            E+T++VHG   AE A  A+   F       S+    +  +S    S    +  + L+ L
Sbjct: 313 HELTSIVHGTLSAEAAVQASEVLFGKGTDPGSVSKSALEFVSTEVPSSVYATNDLALIDL 372

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN-HII 413
           + +     S  +A+R     +I +N   + +    +  +DF     + L  GKKN H++
Sbjct: 373 LTETSLVASKGDAKRAFAEGSIYVNGERVLDSTTMVTPEDFLHDQYLLLRRGKKNWHVV 431


>gi|313206142|ref|YP_004045319.1| tyrosyl-tRNA synthetase [Riemerella anatipestifer DSM 15868]
 gi|312445458|gb|ADQ81813.1| tyrosyl-tRNA synthetase [Riemerella anatipestifer DSM 15868]
 gi|315022949|gb|EFT35972.1| tyrosyl-tRNA synthetase [Riemerella anatipestifer RA-YM]
 gi|325336413|gb|ADZ12687.1| Tyrosyl-tRNA synthetase [Riemerella anatipestifer RA-GD]
          Length = 430

 Score =  266 bits (681), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 161/428 (37%), Positives = 234/428 (54%), Gaps = 25/428 (5%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           F+  L  RG +H +  P   D+L  + +  AYIG+D TA SLH G L  + +L   QK G
Sbjct: 4   FIEELKWRGLVHDMM-PGTEDLLNKE-MTKAYIGFDPTADSLHIGSLIPIKILAHFQKHG 61

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD-ALML 126
           HKPI+L+GG T +IGDPS +   R ++    ++   E IKG  S  + + +   + A ++
Sbjct: 62  HKPIALVGGATGMIGDPSGKSAERNLLDEATLKHYEECIKGQLSRLLDFESDSPNKAELV 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE---QSLSFLEFNYMILQAYD 183
           NN  W+ SI +++  R+IG   +VN M++ +SV+ R   +   + +SF EF Y +LQ YD
Sbjct: 122 NNYDWMKSISFLEFARDIGKHITVNYMMAKDSVKKRFSGDAGVEGMSFTEFTYQLLQGYD 181

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ L +N   +LQMGGSDQWGNI  G +L  R    + +ALT PL+T A GTK GK+ SG
Sbjct: 182 FLHLYQNQGVKLQMGGSDQWGNITTGTELIRRKAQGEAYALTVPLITKADGTKFGKSESG 241

Query: 244 A-IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAK--K 300
             IWL+ + TSPY F+Q+W N  D D   F K  T L   EI+ +     +  +E K  K
Sbjct: 242 ENIWLDAKKTSPYRFYQFWLNATDEDAERFIKFYTFLNKEEIEALINEHREAPHERKLQK 301

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDEV 346
            +A E+T+ VHG  E +K   A+   F  S                   +P   +S+ E+
Sbjct: 302 KLAQEVTSWVHGEAEYQKVVKASEILFGRSTAEDLVALDEATFLDIFDGVPQQELSRKEL 361

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
             GM +  L+  +GF  S  EA+R LK NAI +N S + NE+  +  +DF     I L  
Sbjct: 362 V-GMNITDLLADSGFLKSKGEAKRELKGNAISVNKSKV-NEEFCLSEKDFIDDKFILLQK 419

Query: 407 GKKNHIIC 414
           GKK++ I 
Sbjct: 420 GKKSYFIV 427


>gi|27367282|ref|NP_762809.1| tyrosyl-tRNA synthetase [Vibrio vulnificus CMCP6]
 gi|81447202|sp|Q8D5N2|SYY1_VIBVU RecName: Full=Tyrosyl-tRNA synthetase 1; AltName:
           Full=Tyrosine--tRNA ligase 1; Short=TyrRS 1
 gi|27358851|gb|AAO07799.1| tyrosyl-tRNA synthetase [Vibrio vulnificus CMCP6]
          Length = 422

 Score =  266 bits (681), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 144/378 (38%), Positives = 223/378 (58%), Gaps = 11/378 (2%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L++RG I Q ++  +L  L  Q   T Y G+D TA SLH GHL  L++L   Q  GH+ I
Sbjct: 10  LAQRGLIAQTTDLEQLIALFRQ-PQTLYCGFDPTAGSLHIGHLVPLIMLKRFQDAGHQGI 68

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+   R +  ++ +   +  +       +     +   +M+NN  W
Sbjct: 69  ALIGGATGMIGDPSFKASERSLNSAETVAAWVNALATQIQQLMTPHLTQP-LVMVNNADW 127

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDFVELAKN 190
           + SI  I   R+IG  FSVN M+  ESV+ RL R +Q +SF EF+Y +LQ+YDF +L + 
Sbjct: 128 MQSIGVIAFFRDIGKHFSVNAMIQRESVKQRLARPDQGISFTEFSYSLLQSYDFAQLNQT 187

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKE 250
           + C LQ+GG+DQWGNI+ GIDL  RL    +  LT PL+T + GTK GKT  GAIWL+  
Sbjct: 188 HQCALQIGGNDQWGNIVSGIDLTRRLNGTNVHGLTLPLITKSDGTKFGKTEGGAIWLDAA 247

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATEITT 308
            TSPY F+Q+W N DDADV  F +  T L + +I+++      ++ +  A++I+A E+T 
Sbjct: 248 KTSPYMFYQFWLNCDDADVYRFLRYYTFLSVEQIEQLEATDKAQVGKPSAQRILAEEMTR 307

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTI-SISKD-----EVSRGMGLLTLIVKAGFA 362
            VHG+   E A   +   F   ++  ++  +  + +D     +++    ++TL+++ G A
Sbjct: 308 FVHGQAGLESAQRISQALFSGQLNQLNLAELKQLEQDGLPCRQLAHVSDVVTLLLETGLA 367

Query: 363 TSTNEARRHLKSNAIKIN 380
           +S  +AR  L++ AI+IN
Sbjct: 368 SSKRQAREWLENGAIRIN 385


>gi|54023959|ref|YP_118201.1| tyrosyl-tRNA synthetase [Nocardia farcinica IFM 10152]
 gi|81375263|sp|Q5YYA4|SYY_NOCFA RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|54015467|dbj|BAD56837.1| putative tyrosyl-tRNA synthetase [Nocardia farcinica IFM 10152]
          Length = 429

 Score =  266 bits (680), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 155/421 (36%), Positives = 233/421 (55%), Gaps = 19/421 (4%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
            D +  L+ RG I Q ++   L    + G +T Y G+D TA+SLHAGHL  L+ L   Q+
Sbjct: 3   GDIIDELTWRGLIAQSTDLDALRAALAAGPLTLYAGFDPTAASLHAGHLVPLLALKRFQR 62

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQE-IQENIEKIKGIFSSFIKYGTGKTDAL 124
            GH+PI L GG T +IGDP  RD   R M S + + E   +I+     F+      T A+
Sbjct: 63  AGHRPIVLAGGATGLIGDP--RDVGERTMNSSDTVAEWARRIRSQLERFVDLDDSPTGAV 120

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           ++NN  W   +  +D LR+IG  FSVN ML+ ++V+ RL+ +  +S+ EF+YM+LQA D+
Sbjct: 121 IVNNMDWTGPLSAVDFLRDIGKHFSVNVMLARDTVKRRLEGD-GMSYTEFSYMLLQANDY 179

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK-TLSG 243
           V+L +++ CRLQ+GGSDQWGNII G++L  RL    + ALT PL+T+A G K GK T  G
Sbjct: 180 VQLRRSFGCRLQVGGSDQWGNIIAGVELNRRLDGESVHALTVPLVTSADGKKFGKSTGGG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKKI 301
           ++WL+ EMTSPY ++QY+ N  DADVV + +  T L   E+  +  A  +     EA++ 
Sbjct: 240 SLWLDPEMTSPYAWYQYFVNTADADVVRYLRWFTFLDREELAELERATAERPHAREAQRR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMS-IHSQHMPTI------SISKDEVSR-----G 349
           +A E+TT+VHG +       A+   F    +      T+      +  + EV+R      
Sbjct: 300 LAAEMTTLVHGEQHTRAVQLASQALFGRGDLRELDEATLGAALREAAGEGEVARVTPGEP 359

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
             ++ L+V  G A S   ARR +      +NN  I++        D+     + +  GK+
Sbjct: 360 ATIVDLLVATGLAESRGAARRTVNEGGAAVNNQKIADPDWTPADGDYLHGRWLVVRRGKR 419

Query: 410 N 410
           N
Sbjct: 420 N 420


>gi|23099673|ref|NP_693139.1| tyrosyl-tRNA synthetase [Oceanobacillus iheyensis HTE831]
 gi|81741419|sp|Q8CXA5|SYY_OCEIH RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|22777903|dbj|BAC14174.1| tyrosyl-tRNA synthetase (tyrosine-tRNA ligase) [Oceanobacillus
           iheyensis HTE831]
          Length = 428

 Score =  266 bits (680), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 152/425 (35%), Positives = 229/425 (53%), Gaps = 17/425 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D L  L  RG IHQ ++   L+       VT Y G+D TA SLH GHL  L +L   Q+ 
Sbjct: 2   DILQDLESRGLIHQTTDRERLEKHLQNNQVTLYCGFDPTADSLHIGHLVPLTMLKRFQQA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKPI+L+GGGT +IGDPS R   R +   + +     K++   +  +   +  ++  ++
Sbjct: 62  GHKPIALVGGGTGMIGDPSGRSSERSLNAPEVVHGFTSKLQQQIAKLVDMESNASENTVV 121

Query: 127 --NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
             NN  WL ++  ID LR+ G  F +N ML+ ESV +R+  EQ ++F EF+YMILQ+ D+
Sbjct: 122 ARNNHDWLGNMTIIDFLRDAGKHFGINYMLAKESVSARI--EQGITFTEFSYMILQSLDY 179

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP-----KLFALTSPLLTTASGTKMGK 239
           ++L +  +C LQ+GGSDQWGNI  G++L  R +       ++F LT PL+T A GTK GK
Sbjct: 180 LKLYEEENCTLQIGGSDQWGNITAGMELIRRSRENLDENIEVFGLTVPLITKADGTKFGK 239

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINE 297
           T   AIWL+   TSPY F+Q+W N DD DV+ F +  T L + EI  + K      E   
Sbjct: 240 TAGNAIWLDASKTSPYEFYQFWFNTDDRDVIRFIRYFTFLSVEEITELEKEVETQPEKRV 299

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVS------RGMG 351
           A+K +A E+T  VH     E+A       F   I   ++  +  +  +V         +G
Sbjct: 300 AQKRLAEEMTKTVHDEAALEQAKRITNALFSGDIKQLNVEEVEQAFKDVPNHIITREPVG 359

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           L+ L+V A  ++S  +AR  +K+ AI IN   + +    ++ +D        +  GKK +
Sbjct: 360 LIDLLVDAKISSSKRQAREDVKNGAIYINGERVQDMNYHVEEKDHLGNKFTVVRRGKKKY 419

Query: 412 IICHL 416
            +  +
Sbjct: 420 FLIQV 424


>gi|332878166|ref|ZP_08445895.1| tyrosine--tRNA ligase [Capnocytophaga sp. oral taxon 329 str.
           F0087]
 gi|332683904|gb|EGJ56772.1| tyrosine--tRNA ligase [Capnocytophaga sp. oral taxon 329 str.
           F0087]
          Length = 431

 Score =  266 bits (680), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 150/429 (34%), Positives = 230/429 (53%), Gaps = 24/429 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG I  I    E  ++  +G+  AY+G D TA SLH GHL  +M+L   QK 
Sbjct: 3   NFIEELRWRGMIQDIMPETEQHLM--EGLRAAYVGIDPTADSLHIGHLVGVMMLRHFQKC 60

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT-GKTDALM 125
           GHKP +L+GG T +IGDPS +   R ++  + +  NI+ I+   + F+ + +     A +
Sbjct: 61  GHKPYALVGGATGMIGDPSGKSAERNLLTEEVLAHNIKGIQKQLAKFLDFESEAPNRAEL 120

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQS---LSFLEFNYMILQAY 182
           +NN  W+    ++  +R+IG   +VN M++ +SV+ R    ++   +SF EF+Y +LQ Y
Sbjct: 121 VNNYDWMKEFSFLSFIRDIGKHITVNYMMAKDSVKKRFDPNENTDGMSFTEFSYQLLQGY 180

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DF+ L +     LQMGGSDQWGNI  G +L  R+   K +ALT PL+T A GTK GK+  
Sbjct: 181 DFLHLYRQKGLTLQMGGSDQWGNITTGTELIRRIAGGKAYALTCPLITKADGTKFGKSEG 240

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKK 300
           G +WL+ E TSPY F+QYW N+ D D   + K  T L   EI+++         +   + 
Sbjct: 241 GNVWLDAEKTSPYKFYQYWINVSDEDAQRYIKIFTMLSREEIEQLISEHQAAPHLRVLQN 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDEV 346
            +A E+T +VHGREE +KA  A+   F  S                   +P   +++ ++
Sbjct: 301 KLAEELTVLVHGREELQKAQKASQILFGNSTSDDLRQLDAKTFLEVFDGVPQAEVTRADI 360

Query: 347 SRGMGLL-TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLS 405
           + G+ ++  L  K  F  S +EARR LK  +I +N   +  E   I  +D      + L 
Sbjct: 361 AAGLDMIAALSAKTSFIASNSEARRALKEKSIAVNKEKVE-ESYIIGEKDIIDDKFVLLQ 419

Query: 406 FGKKNHIIC 414
            GKKN+ + 
Sbjct: 420 RGKKNYFVI 428


>gi|282861890|ref|ZP_06270953.1| tyrosyl-tRNA synthetase [Streptomyces sp. ACTE]
 gi|282562915|gb|EFB68454.1| tyrosyl-tRNA synthetase [Streptomyces sp. ACTE]
          Length = 422

 Score =  266 bits (680), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 146/415 (35%), Positives = 236/415 (56%), Gaps = 13/415 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +D +  L  RG   Q ++   L    + G VT Y G+D TA+SLH GHL Q++ +  LQ 
Sbjct: 2   TDIVDELKWRGLFAQSTDEDALRKALADGPVTFYCGFDPTAASLHVGHLVQVLTMRRLQL 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQE-IQENIEKIKGIFSSFIKYGTGKTDAL 124
            G +P++L+GG T  IGDP  R  + R +   E I   +++++G    F+ +  G   A 
Sbjct: 62  AGLRPLALVGGATGQIGDP--RPTAERTLNDPETIAAWVDRLRGQIEPFLTF-EGPNAAT 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M+NN  W   +  I+ LR+IG  F VN+ML+ +SV  RL+ ++ +S+ EF+Y +LQ  DF
Sbjct: 119 MVNNLDWTAGLSAIEFLRDIGKHFRVNKMLTKDSVARRLESQEGISYTEFSYQLLQGMDF 178

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT-PKLFALTSPLLTTASGTKMGKTLSG 243
           +EL + + C LQ GGSDQWGN+  GIDL  RL+   ++ AL +PL+  A GTK GK+ SG
Sbjct: 179 LELYRRHGCTLQQGGSDQWGNLTAGIDLIHRLEPGAQVHALATPLMVKADGTKFGKSESG 238

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKI 301
           A+WL+ EMT+PY F+Q+W N+DD D+ ++ + L+     E+  + +L  +  +   A++ 
Sbjct: 239 AVWLDPEMTTPYAFYQFWLNVDDRDISTYMRILSFKSREELQELEQLTQERPQARSAQRA 298

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMS-IHSQHMPTISISKDEVSRG----MG-LLTL 355
           +A E+TT+VHG  +      A+   F    +     PT+  +  EV       +G ++ L
Sbjct: 299 LAEELTTLVHGGAQCAAVIAASKALFGQGDLAELDEPTLGAALSEVPHARVTELGPVVDL 358

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
           +V+ G + S + ARR +K     +NN+ +++ +     ++      + L  GKKN
Sbjct: 359 LVEVGLSASKSAARRTVKEGGAYVNNAKVTDGEAAPAREELLHGRWLVLRRGKKN 413


>gi|308176932|ref|YP_003916338.1| tyrosine--tRNA ligase [Arthrobacter arilaitensis Re117]
 gi|307744395|emb|CBT75367.1| tyrosine--tRNA ligase [Arthrobacter arilaitensis Re117]
          Length = 441

 Score =  266 bits (680), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 147/418 (35%), Positives = 235/418 (56%), Gaps = 17/418 (4%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG +H  ++  EL+   S+  VT Y G+D TA SLH G+L QL+ +  LQ  GHKP+
Sbjct: 28  LKWRGLVHVSTDEAELERALSEETVTYYCGFDPTAPSLHLGNLVQLLNMRRLQLAGHKPL 87

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQE-IQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           +L+GG T +IGDP  R  + R + ++E + E + K++   S F+    G+    ++NN  
Sbjct: 88  ALVGGSTGLIGDP--RQTAERTLNTKETVTEWVSKLQAQVSRFLS-NEGENAVQLVNNLD 144

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           W   +  +D LR++G +F V  M+  E V +RL  ++ +S+ EF+Y +LQ YDF+EL + 
Sbjct: 145 WTQQLSALDFLRDVGKYFRVGTMVKKEIVAARLNSDEGISYTEFSYQVLQGYDFLELNRQ 204

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKE 250
           Y C LQ GGSDQWGN+  G +L  +++   + A  +PL+T + GTK GK+   AIWL+ E
Sbjct: 205 YGCTLQTGGSDQWGNLTSGTELIRKVQGNSVHAYGTPLITNSDGTKFGKSEGNAIWLDAE 264

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM----AKLQGKEINEAKKIIATEI 306
           M SPY F+Q+W N  DADV+   K  T L   +I  +    A+   K I  A++ +A E+
Sbjct: 265 MCSPYTFYQFWLNASDADVIDRLKVFTFLTRKQIAELETEVAERPFKRI--AQRTLAWEV 322

Query: 307 TTMVHGREEAEKAATAAMECF-DMSIHSQHMPTISISKDEV------SRGMGLLTLIVKA 359
           T++VHG++  E+   A+   F +  + +  +PT+     E+      +  +G+L ++V +
Sbjct: 323 TSLVHGQQATEQVIAASAAVFGNGDLAAIDLPTLESVIAELPTAKVEADNLGILNVLVAS 382

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           G + S +EARR +      +NN  ++    ++   DF       L  GKKN  +  L 
Sbjct: 383 GLSKSLSEARRTVNEGGAYVNNEKVAGIDTELAEADFLHGRYAILRRGKKNMAVVELA 440


>gi|319651869|ref|ZP_08005993.1| tyrosyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2]
 gi|317396428|gb|EFV77142.1| tyrosyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2]
          Length = 419

 Score =  266 bits (680), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 151/401 (37%), Positives = 224/401 (55%), Gaps = 16/401 (3%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L  RG I+Q ++   ++    +  ++ Y G D TA S+H GHL   + L   QK G
Sbjct: 3   LLEDLQWRGIIYQQTDEEGIENTLGKEAISLYCGVDPTADSMHIGHLLPFLTLRRFQKEG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+PI L+GG T +IGDPS + E R++   + +Q N+  IK        +  G+  A+M+N
Sbjct: 63  HRPIVLVGGATGLIGDPSGKSEERKLQTLETVQHNVNCIKNQLKRIFDF-EGENGAIMVN 121

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W  S+  +  LR+ G    VN ML+ +++ SRL  E  +SF EF Y ILQA DF+ L
Sbjct: 122 NYDWAGSMDIVTFLRDYGKHVGVNYMLAKDTISSRL--ETGISFTEFTYTILQAMDFLHL 179

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERL--KTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            +N++C++Q+GGSDQWGNI  G++L  ++  +  K + LT PL+T A GTK GKT SGAI
Sbjct: 180 YENHNCKMQIGGSDQWGNITTGLELIRKMAPEGSKAYGLTIPLVTKADGTKFGKTESGAI 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE--INEAKKIIA 303
           WL+ E TSPY F+Q+W N  DADV+ + K  T L   EI+ + K    E  + +A+K +A
Sbjct: 240 WLDSEKTSPYEFYQFWINTADADVIKYLKFFTFLSREEIEGLEKAVQDEPHLRKAQKALA 299

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI-----SISKDEVSRG--MGLLTLI 356
            E+T M+HG    E+A       F   I +     I      +   E S G  +G++ L+
Sbjct: 300 EEMTRMIHGDAALEQAIKITAALFSGEIKNLSASEIKQGFKDVPSYEHSEGGELGIVDLL 359

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
           V A  + S  +AR  + + A+ +N   I+  +L   L D D
Sbjct: 360 VAAKISPSKRQAREDVTNGAVSVNGERIT--ELDYTLSDKD 398


>gi|255533200|ref|YP_003093572.1| tyrosyl-tRNA synthetase [Pedobacter heparinus DSM 2366]
 gi|255346184|gb|ACU05510.1| tyrosyl-tRNA synthetase [Pedobacter heparinus DSM 2366]
          Length = 428

 Score =  266 bits (680), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 149/429 (34%), Positives = 232/429 (54%), Gaps = 27/429 (6%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           ++F+  L  RG +  +    E  +  ++G+   YIG+D TA SLH GHLTQ+M L   Q+
Sbjct: 2   TNFVEELRWRGMLQDMMPGTEEKL--NEGMTAGYIGFDPTADSLHVGHLTQIMTLIHFQR 59

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP +L+GG T ++GDPS +   R +     ++ N+  +K   S F+K+      A+M
Sbjct: 60  AGHKPYALVGGATGMVGDPSGKSAERNLQTEDMVEHNLAGMKRQLSRFLKFEAAGNGAVM 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  W   +   D +R+IG   +VN M++ +SV+ RL+ +  LSF EF Y ++Q YDF 
Sbjct: 120 INNADWFKDMGLFDFIRDIGKHITVNYMMAKDSVKRRLEGDSGLSFTEFCYQLIQGYDFY 179

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L K+++C +QMGGSDQWGNI+ G +L  R      +A+T+ L+  A GTK GKT SGA+
Sbjct: 180 YLWKHHNCLVQMGGSDQWGNIVTGTELIRRKDAGTAYAITTHLIKKADGTKFGKTESGAV 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEA------K 299
           WL+ E TSPY F+Q+W N  D D   + +  T     EI+ +      E N A      +
Sbjct: 240 WLDAEKTSPYKFYQFWLNASDDDTKKWIRIFTLKTKEEIETLE----NEHNAAPHLRILQ 295

Query: 300 KIIATEITTMVHGREEAEKA--------ATAAMECFD-MSIHS-----QHMPTISISKDE 345
           K +A +IT   H  E  E A           ++E F  +S+       + +P  +ISKDE
Sbjct: 296 KALAEDITIRTHSEEALETALKTSDFLFGNGSLEFFKTLSVAQVFEIFEGIPQFAISKDE 355

Query: 346 VSRGMGLLTLIV-KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           + +G+   TL+  K+    S  EA++ ++   + IN   + +   Q+   D  +   I +
Sbjct: 356 LEQGIDAATLLAEKSSVFASKGEAKKLIQGGGVSINKEKLKDPTDQLSATDLLNGQFIVV 415

Query: 405 SFGKKNHII 413
             GKKN+ +
Sbjct: 416 QKGKKNYYL 424


>gi|255326330|ref|ZP_05367414.1| tyrosine--tRNA ligase [Rothia mucilaginosa ATCC 25296]
 gi|255296547|gb|EET75880.1| tyrosine--tRNA ligase [Rothia mucilaginosa ATCC 25296]
          Length = 434

 Score =  266 bits (680), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 151/416 (36%), Positives = 231/416 (55%), Gaps = 21/416 (5%)

Query: 15  RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLM 74
           RG +H  ++   L+   S+  +T Y GYD TA+SLH GHL QL+++  LQ  GHKP+ L+
Sbjct: 25  RGLVHVSTDEAALEKALSEESLTFYTGYDPTAASLHLGHLVQLLVMRRLQLAGHKPLGLV 84

Query: 75  GGGTSIIGDPSFRDESRRMMRSQEI-QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
           GG T +IGDP  R  S R++ S E+  E ++ ++     F+ +  G+  A M+NN  W  
Sbjct: 85  GGFTGLIGDP--RQTSERVLNSPEVVAEWVKSLRAQIERFLSF-EGENAARMVNNLDWSG 141

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDC 193
            +  + LLR++G  F V  M+  E V  RL  ++ +S+ EF+Y ILQ  DF+EL + + C
Sbjct: 142 QMSALQLLRDVGKHFRVGTMVKKEIVAKRLNSDEGISYTEFSYQILQGLDFLELNRRFGC 201

Query: 194 RLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTS 253
            LQ GGSDQWGN+  G +L  +++   + A+ +PL+T + GTK GK+   AIWLN +M S
Sbjct: 202 TLQTGGSDQWGNLTSGTELIRKVEGKSVHAIGTPLITNSDGTKFGKSEGNAIWLNPQMCS 261

Query: 254 PYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIATEITTMVH 311
           PY F+Q+W N  DADV+   K  T L  +EI   A+   KE    EA+K +A  +T++VH
Sbjct: 262 PYAFYQFWLNTADADVLDRLKVFTFLTRAEIAEFAEKVEKEPFKREAQKTLAYLVTSLVH 321

Query: 312 GREEAEKAATAAMECF---------DMSIHS--QHMPTISISKDEVSRGMGLLTLIVKAG 360
           G E  ++A  A+   F         + ++ S    +P+  +S+D     + +++++ + G
Sbjct: 322 GTEATDQAVAASEALFGKGDFAALDEATLESVVAELPSAKLSEDR----LDMISVLTELG 377

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           FA S +EARR LK     +N   +  E   I   D        +  GKKN     L
Sbjct: 378 FAKSNSEARRILKEGGASVNGVKVQGEDAAISKDDLLHGRFAMVRRGKKNQGAVEL 433


>gi|229824532|ref|ZP_04450601.1| hypothetical protein GCWU000282_01876 [Catonella morbi ATCC 51271]
 gi|229785903|gb|EEP22017.1| hypothetical protein GCWU000282_01876 [Catonella morbi ATCC 51271]
          Length = 422

 Score =  266 bits (680), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 154/421 (36%), Positives = 234/421 (55%), Gaps = 21/421 (4%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L  L+ RG I+Q +N + L+ L ++  +  Y G D T  S+H GHL   M+L   Q  GH
Sbjct: 4   LDDLTWRGAINQQTNAQGLEELVNKKAIGLYCGVDPTGDSMHIGHLIPFMILKRFQLAGH 63

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSS-FIKYGTGKTDALMLN 127
           KP+ L+GGGT  IGDPS R+  R +     ++EN  K+    +  F+K     +   ++N
Sbjct: 64  KPVVLIGGGTGSIGDPSGRNSERTLQTMDVVKENARKLADQMNRLFLKGDVQASGFRIVN 123

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  I  +D LR+ G  F++N ML+ + V SRL  E  +SF EF+Y ILQ+ DF  L
Sbjct: 124 NYDWLSQISLLDFLRDYGKHFNINNMLAKDVVASRL--EVGISFTEFSYQILQSIDFAHL 181

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLK--TPKLFALTSPLLTTASGTKMGKTLSGAI 245
            K YD +LQ+GG+DQWGNI  G+D   R +    +++ LT PL+  + GTK GKT  GA+
Sbjct: 182 YKEYDVQLQIGGADQWGNITAGLDFIRRTEGHETEVYGLTIPLMLKSDGTKFGKTAGGAV 241

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA-KLQGK-EINEAKKIIA 303
           WL+ E T+P+ F+Q+W N  D DVV F K  T L   EID +A +++ +  +  A K +A
Sbjct: 242 WLDPEKTTPFEFYQFWLNQQDGDVVKFLKYFTFLSHEEIDALAVEIETQPHLRVAHKRLA 301

Query: 304 TEITTMVHGREEAEKA-----ATAAMECFDMSIHS-----QHMPTISISKDEVSRGMGLL 353
            E+T  VHG+E  ++A     A    E   +++H      ++MP  S +++E +    L 
Sbjct: 302 EEVTRFVHGQEALDEAIRITEALFTGEVGSLTVHEIEQGFRNMPQASAAREEAN----LA 357

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
             +V  G   S  EAR  + + AI +N + +++ +  I  QD      + +  GKKN+ +
Sbjct: 358 VWLVDTGIVKSRREAREFISNGAITLNGTKVTDVEAVITPQDAIGGKYVVVRRGKKNYTL 417

Query: 414 C 414
            
Sbjct: 418 V 418


>gi|225010140|ref|ZP_03700612.1| tyrosyl-tRNA synthetase [Flavobacteria bacterium MS024-3C]
 gi|225005619|gb|EEG43569.1| tyrosyl-tRNA synthetase [Flavobacteria bacterium MS024-3C]
          Length = 431

 Score =  266 bits (679), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 153/428 (35%), Positives = 227/428 (53%), Gaps = 23/428 (5%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           ++F++ L  RG +H +    E  +L    +  AY+G D TA SLH GHL  +MLL   Q 
Sbjct: 3   TNFIAELKWRGMLHDVMPETEEHLLSE--MRAAYMGIDPTADSLHIGHLVGVMLLKHFQI 60

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA-L 124
            GHKP +L+GG T +IGDPS +   R ++    ++ N   +K   S F+ + +  ++A +
Sbjct: 61  AGHKPYALIGGATGMIGDPSGKSNERNLLDEATLRHNQAALKEQLSRFLDFDSEVSNAAV 120

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQAY 182
           ++NN  W+    ++  +R++G   +VN M++ +SV+ RL  E  + +SF EF Y ++Q Y
Sbjct: 121 LVNNYDWMKDFSFLSFIRDVGKHITVNYMMAKDSVKKRLSSEAAEGMSFTEFTYQLVQGY 180

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DF+ L KN+ C LQMGGSDQWGNI  G +L  R+   K +ALT PL+T A GTK GKT  
Sbjct: 181 DFLHLYKNFQCTLQMGGSDQWGNITTGTELIRRIGGGKGYALTCPLITKADGTKFGKTEG 240

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKK 300
           G IWL+   TSPY F+QYW N  D D   + K  T L    I ++     +   +   +K
Sbjct: 241 GNIWLDANRTSPYVFFQYWLNTSDVDAEKYIKIFTLLDQETIAKLVSDHQEAPHLRLLQK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDEV 346
            +A E+TT VHG E  E A  A+   F  +                 + +P   +    +
Sbjct: 301 NLAKEVTTAVHGSEAYENALKASDILFGKTTADVVKTLDTQTFLAVFEGVPQAVLPFSNL 360

Query: 347 SRGMGLL-TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLS 405
             G+ ++  L  + GF  S  +ARR LK NAI +N   +  E   I  +D      + L 
Sbjct: 361 VNGLDMIAALSAETGFLKSNGDARRELKQNAISVNKEKVG-ETYLISQKDLIDQKYVLLQ 419

Query: 406 FGKKNHII 413
            GKKN+ I
Sbjct: 420 RGKKNYFI 427


>gi|317507360|ref|ZP_07965095.1| tyrosyl-tRNA synthetase [Segniliparus rugosus ATCC BAA-974]
 gi|316254308|gb|EFV13643.1| tyrosyl-tRNA synthetase [Segniliparus rugosus ATCC BAA-974]
          Length = 468

 Score =  266 bits (679), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 147/414 (35%), Positives = 239/414 (57%), Gaps = 15/414 (3%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L  L  RG + Q ++ + L    ++G VT Y G+D TA SLHAGHL  L+    LQ+ GH
Sbjct: 45  LEELGWRGLVAQSTDEQALAEAFAKGPVTFYAGFDPTADSLHAGHLMLLLTARRLQRLGH 104

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQE-IQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           +P+ L GG T +IGDP  RD   R +   E ++  +E++K     F+++    T A++ N
Sbjct: 105 RPVMLAGGATGLIGDP--RDVGERQLADAETVRARVERLKPQLMKFVEFDDSPTGAVLAN 162

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W   +  +D LR+IG  FSVN MLS E+++ RL  +  LS+ EF+Y++LQ+ D+++L
Sbjct: 163 NLDWTGELSALDFLRDIGKHFSVNVMLSRETIKKRLDGD-GLSYTEFSYLLLQSNDYLQL 221

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK-TLSGAIW 246
            +     LQ+GGSDQWGNI+ G++L  R+    + ALT+PL+T+A GTK+GK T  G+IW
Sbjct: 222 RRRLGATLQLGGSDQWGNIVGGVELIRRVDGAHVHALTTPLVTSADGTKLGKSTGGGSIW 281

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIAT 304
           L+ E TSPY ++QY+  + DADV  + +  T L   EI+ + +   +  ++  A++ +A 
Sbjct: 282 LDPEKTSPYAWYQYFLAVQDADVGKYLRWFTDLSRPEIEELDQATAERPHQRLAQRRLAQ 341

Query: 305 EITTMVHGREEAEKAATAA--------MECFDMSIHSQHMPTISISKDEVSRGMGLLTLI 356
           E+TT+VH  EE  +  +A+        +E  D +   Q +   S+++      +G++ L+
Sbjct: 342 ELTTLVHSAEELRRVESASQALFGAGKLEDLDPTALGQALAETSLAEVGPGGEVGIVDLL 401

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
           V  G   S N ARR ++     +NN  +++ + +    D+     + L  GK+N
Sbjct: 402 VATGLCESRNAARRAVQEGGAWVNNQRVADAEWEPSEDDWLHGRWLVLRRGKRN 455


>gi|197121511|ref|YP_002133462.1| tyrosyl-tRNA synthetase [Anaeromyxobacter sp. K]
 gi|254783566|sp|B4UGQ8|SYY_ANASK RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|196171360|gb|ACG72333.1| tyrosyl-tRNA synthetase [Anaeromyxobacter sp. K]
          Length = 420

 Score =  266 bits (679), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 151/423 (35%), Positives = 234/423 (55%), Gaps = 19/423 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + L  L  R  +H    P  L    +QG +T Y+G+D TA SLH GHL  +M L WLQ+ 
Sbjct: 3   NLLEALVSRSLVHD-QTP-GLQARLAQGPITGYVGFDPTADSLHVGHLLAVMSLAWLQRC 60

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           G  PI ++GGGT ++GDPS +   R ++  +EI  N+  I+     F+ +  G+  A + 
Sbjct: 61  GGTPIIVVGGGTGMVGDPSGKRSERPVLSVEEIDRNVAAIRAQLERFVSF-EGQNAARVR 119

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL +I  ++ LR++G  F+VN ML+ +SV+ R+  E  +SF EF+Y ++QAYDF  
Sbjct: 120 NNADWLRAIGLMEFLRDVGKHFTVNYMLAKDSVKGRM--ESGISFTEFSYQLIQAYDFWH 177

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L ++  C LQMGGSDQWGNI  G +L  R     +  LT PLLTTASGTK GKT  GA+W
Sbjct: 178 LFRSEKCELQMGGSDQWGNITAGAELVSRKDGASVHGLTFPLLTTASGTKFGKTEGGAVW 237

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIAT 304
           L+   TSPY F+Q+W N DD DV    K  T L + +I  +   Q ++  +  A++ +A 
Sbjct: 238 LDPARTSPYKFFQFWLNTDDRDVERLLKFFTFLSVEDIAALLAEQARDPGKRPAQRRLAE 297

Query: 305 EITTMVHGREEAEKAATAAMECFD-----------MSIHSQHMPTISISKDEVSRGMGLL 353
           ++T  VHG +       A+   F            + + +  +P+ +++ DE++  + + 
Sbjct: 298 DVTARVHGPDVTRSVIEASRILFGGTDLRAASADVLDVLAGEIPSAAVTGDELA-ALTIA 356

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            L+VK G A S  E RR +      +N +++ +   ++   D  + G   L  GK+N+ +
Sbjct: 357 DLLVKVGLAASKGEVRRGVAGRGFSLNGAVLESGDAKVAAGDLLAGGYALLQKGKRNYAL 416

Query: 414 CHL 416
             +
Sbjct: 417 VKV 419


>gi|171914524|ref|ZP_02929994.1| Tyrosyl-tRNA synthetase [Verrucomicrobium spinosum DSM 4136]
          Length = 433

 Score =  266 bits (679), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 139/392 (35%), Positives = 225/392 (57%), Gaps = 24/392 (6%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +DF S+   R  +  +      D L ++  +T Y G+D TA SLH GH+  L+ L   Q 
Sbjct: 14  ADFTSVPESRADLLPLP-----DRLAAK-AITLYCGFDPTADSLHVGHIVPLLALRRFQL 67

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH PI++ GG T  IGDPS +   R+++  ++I+ N+E ++   +  + + +    A +
Sbjct: 68  AGHHPIAVAGGATGSIGDPSGKSAERQLLTQEQIKANVEAVRPQLAKLLDFDSPVNPARL 127

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK-REQSLSFLEFNYMILQAYDF 184
           ++N  W+  I Y+D LR++G  F+VN+M++ ESVR+R++ R+  +S+ EF+YM+LQ+YD+
Sbjct: 128 MDNADWIGPISYLDFLRDVGKHFTVNQMVAKESVRARMEDRDVGISYTEFSYMLLQSYDY 187

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             LA+   C LQ+GGSDQWGNI  GIDL  +      + LT PL+T + GTK GK+  GA
Sbjct: 188 FHLAQVAGCELQIGGSDQWGNITTGIDLVRKKLGRHAYGLTMPLITKSDGTKFGKSEGGA 247

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN----EAKK 300
           IWL+ + TS Y F+Q+W N DD DVV + K  T LP  EI  +      E N    +A +
Sbjct: 248 IWLDPKKTSIYKFYQFWINSDDRDVVKYLKFFTFLPHDEIRALEAEH--ETNPGARKAHQ 305

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIH----------SQHMPTISISKDEV-SRG 349
            +A  ITT++HG +    A  A+   F  S+           S+ +P  +++ D++   G
Sbjct: 306 ALARSITTLIHGEQATSDAVRASEILFGGSLEGISASTLQTLSEEVPNATVTADQLGGEG 365

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINN 381
           + L+  +V +G + S  +AR+ ++   + +N 
Sbjct: 366 LPLVEALVLSGLSQSKGQARKDVEGGGVYVNG 397


>gi|292670923|ref|ZP_06604349.1| tyrosine-tRNA ligase [Selenomonas noxia ATCC 43541]
 gi|292647544|gb|EFF65516.1| tyrosine-tRNA ligase [Selenomonas noxia ATCC 43541]
          Length = 320

 Score =  266 bits (679), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 143/318 (44%), Positives = 197/318 (61%), Gaps = 11/318 (3%)

Query: 94  MRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRM 153
           M    I  N E  K   S FI +   +  A+M++N  WL  + YIDLLR++G  F+VNRM
Sbjct: 1   MTDDTIHYNCECFKKQISRFIDFNDDR--AIMVDNGDWLRKLNYIDLLRDVGKHFTVNRM 58

Query: 154 LSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLG 213
           LS ES + R   E+ L+FLEFNYMI+QAYDF+EL + Y CRLQMGG DQW NII G++L 
Sbjct: 59  LSAESYKQRW--EKGLTFLEFNYMIMQAYDFLELNRRYGCRLQMGGDDQWSNIIAGVELC 116

Query: 214 ERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFA 273
            R K   +F LT+ LLT + G+KMGKT  GA+WL+ E TS Y+F+QYWRNIDDAD+    
Sbjct: 117 RRKKNITVFGLTNRLLTKSDGSKMGKTAGGALWLDPEKTSSYDFYQYWRNIDDADIEICL 176

Query: 274 KRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS 333
             LT LPM E+ R+A  +G+ IN +K+I+A E+T +VHG +EA KA   A   F   I +
Sbjct: 177 SLLTYLPMEEVRRLAAAEGRNINRSKEILAYEVTKIVHGEQEALKAQETARTLFSGGISA 236

Query: 334 QHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL 393
           Q +P I      V+ G  L+ ++ ++   +S  EARR ++   I +N+  +++E   +  
Sbjct: 237 Q-LPKI-----HVTIGEKLIDVLTRSKVLSSKGEARRLIQQGGITLNDVRVTDEYYVLNE 290

Query: 394 QDFDSTGNIKLSFGKKNH 411
            DF   G   +  GKK H
Sbjct: 291 IDF-LQGIALIKKGKKKH 307


>gi|15608827|ref|NP_216205.1| tyrosyl-tRNA synthetase [Mycobacterium tuberculosis H37Rv]
 gi|15841146|ref|NP_336183.1| tyrosyl-tRNA synthetase [Mycobacterium tuberculosis CDC1551]
 gi|31792875|ref|NP_855368.1| tyrosyl-tRNA synthetase [Mycobacterium bovis AF2122/97]
 gi|121637596|ref|YP_977819.1| tyrosyl-tRNA synthetase [Mycobacterium bovis BCG str. Pasteur
           1173P2]
 gi|148661486|ref|YP_001283009.1| tyrosyl-tRNA synthetase [Mycobacterium tuberculosis H37Ra]
 gi|148822896|ref|YP_001287650.1| tyrosyl-tRNA synthetase [Mycobacterium tuberculosis F11]
 gi|167969193|ref|ZP_02551470.1| tyrosyl-tRNA synthetase [Mycobacterium tuberculosis H37Ra]
 gi|215404008|ref|ZP_03416189.1| tyrosyl-tRNA synthetase [Mycobacterium tuberculosis 02_1987]
 gi|215411336|ref|ZP_03420144.1| tyrosyl-tRNA synthetase [Mycobacterium tuberculosis 94_M4241A]
 gi|215427012|ref|ZP_03424931.1| tyrosyl-tRNA synthetase [Mycobacterium tuberculosis T92]
 gi|215430581|ref|ZP_03428500.1| tyrosyl-tRNA synthetase [Mycobacterium tuberculosis EAS054]
 gi|215445876|ref|ZP_03432628.1| tyrosyl-tRNA synthetase [Mycobacterium tuberculosis T85]
 gi|218753397|ref|ZP_03532193.1| tyrosyl-tRNA synthetase [Mycobacterium tuberculosis GM 1503]
 gi|219557611|ref|ZP_03536687.1| tyrosyl-tRNA synthetase [Mycobacterium tuberculosis T17]
 gi|224990071|ref|YP_002644758.1| tyrosyl-tRNA synthase [Mycobacterium bovis BCG str. Tokyo 172]
 gi|253799272|ref|YP_003032273.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis KZN 1435]
 gi|254364529|ref|ZP_04980575.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis str.
           Haarlem]
 gi|254550698|ref|ZP_05141145.1| tyrosyl-tRNA synthetase [Mycobacterium tuberculosis '98-R604
           INH-RIF-EM']
 gi|260186642|ref|ZP_05764116.1| tyrosyl-tRNA synthetase [Mycobacterium tuberculosis CPHL_A]
 gi|260200753|ref|ZP_05768244.1| tyrosyl-tRNA synthetase [Mycobacterium tuberculosis T46]
 gi|260204958|ref|ZP_05772449.1| tyrosyl-tRNA synthetase [Mycobacterium tuberculosis K85]
 gi|289443146|ref|ZP_06432890.1| tyrosyl-tRNA synthetase [Mycobacterium tuberculosis T46]
 gi|289447303|ref|ZP_06437047.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis CPHL_A]
 gi|289554538|ref|ZP_06443748.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis KZN 605]
 gi|289569737|ref|ZP_06449964.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis T17]
 gi|289574357|ref|ZP_06454584.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis K85]
 gi|289745874|ref|ZP_06505252.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis 02_1987]
 gi|289750245|ref|ZP_06509623.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis T92]
 gi|289753779|ref|ZP_06513157.1| tyrosyl-tRNA synthetase [Mycobacterium tuberculosis EAS054]
 gi|289757799|ref|ZP_06517177.1| tyrosyl-tRNA synthetase [Mycobacterium tuberculosis T85]
 gi|289761844|ref|ZP_06521222.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis GM 1503]
 gi|297634241|ref|ZP_06952021.1| tyrosyl-tRNA synthetase [Mycobacterium tuberculosis KZN 4207]
 gi|297731228|ref|ZP_06960346.1| tyrosyl-tRNA synthetase [Mycobacterium tuberculosis KZN R506]
 gi|298525188|ref|ZP_07012597.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis 94_M4241A]
 gi|306775874|ref|ZP_07414211.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis SUMu001]
 gi|306779692|ref|ZP_07418029.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis SUMu002]
 gi|306784425|ref|ZP_07422747.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis SUMu003]
 gi|306788792|ref|ZP_07427114.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis SUMu004]
 gi|306793127|ref|ZP_07431429.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis SUMu005]
 gi|306797507|ref|ZP_07435809.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis SUMu006]
 gi|306803388|ref|ZP_07440056.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis SUMu008]
 gi|306807970|ref|ZP_07444638.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis SUMu007]
 gi|306967787|ref|ZP_07480448.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis SUMu009]
 gi|306971983|ref|ZP_07484644.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis SUMu010]
 gi|307079695|ref|ZP_07488865.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis SUMu011]
 gi|307084272|ref|ZP_07493385.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis SUMu012]
 gi|313658560|ref|ZP_07815440.1| tyrosyl-tRNA synthetase [Mycobacterium tuberculosis KZN V2475]
 gi|54039702|sp|P67612|SYY_MYCBO RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|54042059|sp|P67611|SYY_MYCTU RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|2326732|emb|CAB10946.1| Probable Tyrosyl-tRNA synthase tyrS (TYRRS) [Mycobacterium
           tuberculosis H37Rv]
 gi|13881365|gb|AAK45997.1| tyrosyl-tRNA synthetase [Mycobacterium tuberculosis CDC1551]
 gi|31618465|emb|CAD96383.1| Probable Tyrosyl-tRNA synthase tyrS (TYRRS) [Mycobacterium bovis
           AF2122/97]
 gi|121493243|emb|CAL71714.1| Probable Tyrosyl-tRNA synthase tyrS (TYRRS) [Mycobacterium bovis
           BCG str. Pasteur 1173P2]
 gi|134150043|gb|EBA42088.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis str.
           Haarlem]
 gi|148505638|gb|ABQ73447.1| tyrosyl-tRNA synthetase [Mycobacterium tuberculosis H37Ra]
 gi|148721423|gb|ABR06048.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis F11]
 gi|224773184|dbj|BAH25990.1| tyrosyl-tRNA synthase [Mycobacterium bovis BCG str. Tokyo 172]
 gi|253320775|gb|ACT25378.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis KZN 1435]
 gi|289416065|gb|EFD13305.1| tyrosyl-tRNA synthetase [Mycobacterium tuberculosis T46]
 gi|289420261|gb|EFD17462.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis CPHL_A]
 gi|289439170|gb|EFD21663.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis KZN 605]
 gi|289538788|gb|EFD43366.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis K85]
 gi|289543491|gb|EFD47139.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis T17]
 gi|289686402|gb|EFD53890.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis 02_1987]
 gi|289690832|gb|EFD58261.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis T92]
 gi|289694366|gb|EFD61795.1| tyrosyl-tRNA synthetase [Mycobacterium tuberculosis EAS054]
 gi|289709350|gb|EFD73366.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis GM 1503]
 gi|289713363|gb|EFD77375.1| tyrosyl-tRNA synthetase [Mycobacterium tuberculosis T85]
 gi|298494982|gb|EFI30276.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis 94_M4241A]
 gi|308215626|gb|EFO75025.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis SUMu001]
 gi|308327344|gb|EFP16195.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis SUMu002]
 gi|308330786|gb|EFP19637.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis SUMu003]
 gi|308334609|gb|EFP23460.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis SUMu004]
 gi|308338396|gb|EFP27247.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis SUMu005]
 gi|308342119|gb|EFP30970.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis SUMu006]
 gi|308345590|gb|EFP34441.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis SUMu007]
 gi|308349907|gb|EFP38758.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis SUMu008]
 gi|308354528|gb|EFP43379.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis SUMu009]
 gi|308358504|gb|EFP47355.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis SUMu010]
 gi|308362443|gb|EFP51294.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis SUMu011]
 gi|308366128|gb|EFP54979.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis SUMu012]
 gi|323719779|gb|EGB28893.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis CDC1551A]
 gi|326903303|gb|EGE50236.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis W-148]
 gi|328459024|gb|AEB04447.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis KZN 4207]
          Length = 424

 Score =  266 bits (679), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 154/420 (36%), Positives = 236/420 (56%), Gaps = 25/420 (5%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  LS RG I Q ++   L     +G +T Y G+D TA SLHAGHL  L+ L   Q+ G
Sbjct: 5   ILDELSWRGLIAQSTDLDTLAAEAQRGPMTVYAGFDPTAPSLHAGHLVPLLTLRRFQRAG 64

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQE-IQENIEKIKGIFSSFIKYGTGKTDALML 126
           H+PI L GG T +IGDP  RD   R +   + + E  E+I+G    F+ +      A++ 
Sbjct: 65  HRPIVLAGGATGMIGDP--RDVGERSLNEADTVAEWTERIRGQLERFVDFDDSPMGAIVE 122

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W  S+  I+ LR+IG  FSVN ML+ +++R RL  E  +S+ EF+Y++LQA D+VE
Sbjct: 123 NNLEWTGSLSAIEFLRDIGKHFSVNVMLARDTIRRRLAGE-GISYTEFSYLLLQANDYVE 181

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK-TLSGAI 245
           L + + C LQ+GG+DQWGNII G+ L  +     + ALT PL+T A GTK GK T  G++
Sbjct: 182 LHRRHGCTLQIGGADQWGNIIAGVRLVRQKLGATVHALTVPLVTAADGTKFGKSTGGGSL 241

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKKIIA 303
           WL+ +MTSPY ++QY+ N  DADV+ + +  T L   E+  +  A  Q  +   A++ +A
Sbjct: 242 WLDPQMTSPYAWYQYFVNTADADVIRYLRWFTFLSADELAELEQATAQRPQQRAAQRRLA 301

Query: 304 TEITTMVHGREEAEKAATAAMEC-------------FDMSIHSQHMPTISISKDEVSRGM 350
           +E+T +VHG     +AATAA+E               D +  +  +   ++++ +     
Sbjct: 302 SELTVLVHG-----EAATAAVEHASRALFGRGELARLDEATLAAALRETTVAELKPGSPD 356

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
           G++ L+V +G + S   ARR +    + +NN  + NE+   +  DF     + L  GK++
Sbjct: 357 GIVDLLVASGLSASKGAARRTIHEGGVSVNNIRVDNEEWVPQSSDFLHGRWLVLRRGKRS 416


>gi|167013192|pdb|2JAN|A Chain A, Tyrosyl-Trna Synthetase From Mycobacterium Tuberculosis In
           Unliganded State
 gi|167013193|pdb|2JAN|B Chain B, Tyrosyl-Trna Synthetase From Mycobacterium Tuberculosis In
           Unliganded State
 gi|167013194|pdb|2JAN|C Chain C, Tyrosyl-Trna Synthetase From Mycobacterium Tuberculosis In
           Unliganded State
 gi|167013195|pdb|2JAN|D Chain D, Tyrosyl-Trna Synthetase From Mycobacterium Tuberculosis In
           Unliganded State
          Length = 432

 Score =  266 bits (679), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 154/420 (36%), Positives = 236/420 (56%), Gaps = 25/420 (5%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  LS RG I Q ++   L     +G +T Y G+D TA SLHAGHL  L+ L   Q+ G
Sbjct: 5   ILDELSWRGLIAQSTDLDTLAAEAQRGPMTVYAGFDPTAPSLHAGHLVPLLTLRRFQRAG 64

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQE-IQENIEKIKGIFSSFIKYGTGKTDALML 126
           H+PI L GG T +IGDP  RD   R +   + + E  E+I+G    F+ +      A++ 
Sbjct: 65  HRPIVLAGGATGMIGDP--RDVGERSLNEADTVAEWTERIRGQLERFVDFDDSPMGAIVE 122

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W  S+  I+ LR+IG  FSVN ML+ +++R RL  E  +S+ EF+Y++LQA D+VE
Sbjct: 123 NNLEWTGSLSAIEFLRDIGKHFSVNVMLARDTIRRRLAGE-GISYTEFSYLLLQANDYVE 181

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK-TLSGAI 245
           L + + C LQ+GG+DQWGNII G+ L  +     + ALT PL+T A GTK GK T  G++
Sbjct: 182 LHRRHGCTLQIGGADQWGNIIAGVRLVRQKLGATVHALTVPLVTAADGTKFGKSTGGGSL 241

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKKIIA 303
           WL+ +MTSPY ++QY+ N  DADV+ + +  T L   E+  +  A  Q  +   A++ +A
Sbjct: 242 WLDPQMTSPYAWYQYFVNTADADVIRYLRWFTFLSADELAELEQATAQRPQQRAAQRRLA 301

Query: 304 TEITTMVHGREEAEKAATAAMEC-------------FDMSIHSQHMPTISISKDEVSRGM 350
           +E+T +VHG     +AATAA+E               D +  +  +   ++++ +     
Sbjct: 302 SELTVLVHG-----EAATAAVEHASRALFGRGELARLDEATLAAALRETTVAELKPGSPD 356

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
           G++ L+V +G + S   ARR +    + +NN  + NE+   +  DF     + L  GK++
Sbjct: 357 GIVDLLVASGLSASKGAARRTIHEGGVSVNNIRVDNEEWVPQSSDFLHGRWLVLRRGKRS 416


>gi|298345143|ref|YP_003717830.1| tyrosine--tRNA ligase [Mobiluncus curtisii ATCC 43063]
 gi|304390730|ref|ZP_07372682.1| tyrosine--tRNA ligase [Mobiluncus curtisii subsp. curtisii ATCC
           35241]
 gi|298235204|gb|ADI66336.1| tyrosine--tRNA ligase [Mobiluncus curtisii ATCC 43063]
 gi|304325613|gb|EFL92859.1| tyrosine--tRNA ligase [Mobiluncus curtisii subsp. curtisii ATCC
           35241]
          Length = 425

 Score =  266 bits (679), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 146/415 (35%), Positives = 237/415 (57%), Gaps = 13/415 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           SD +  L+ RG I Q ++   L    S+G +T Y G+D TA+SLH GHL QL+++  LQ 
Sbjct: 7   SDLIDELTWRGLIKQHTDMDALRRALSEGPLTFYCGFDPTAASLHHGHLVQLIMMRHLQL 66

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH PI+L+GG T +IGDP    E R++   + +    ++++     F+ +  G+  A M
Sbjct: 67  AGHHPIALVGGATGLIGDPRMTAE-RQLQDKETVAGWADRLQCQIERFLDF-EGENPARM 124

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  W   +  IDLLR++G  F +  ML+ ++V  RLK ++ +SF EF+Y ILQA D++
Sbjct: 125 VNNLEWTAPLSAIDLLRDLGKNFRMGTMLAKDAVARRLKSDEGISFTEFSYQILQANDYL 184

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           +L + Y   L+ GG+DQWGN++ G+DL  +++   +  +T+PL+T + GTK GK+  GAI
Sbjct: 185 QLYRKYGVTLETGGNDQWGNLVGGMDLIRKVEGKDVHVMTTPLITKSDGTKFGKSEGGAI 244

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE---INEAKKII 302
           WL+ EM SPY F+Q+W N +DADVV+  K  T L   EI+ + + + KE      A++ +
Sbjct: 245 WLDPEMFSPYAFYQFWLNTEDADVVNLLKVFTFLSRGEIEAL-ETETKENPGKRAAQRAL 303

Query: 303 ATEITTMVHGREEAEKAATAAMECF------DMSIHSQHMPTISISKDEVSRGM-GLLTL 355
           A  +TT+VHG ++ E+   A+   F      ++   +    T+ + + +V  G   +L L
Sbjct: 304 AEAVTTLVHGADQTERVKAASTALFGRGDLREVDGKTLVAATVDLPRTQVVLGQTNILHL 363

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
           +V +G       A+R + S    +NN  + +E   I  +D    G +    GK+ 
Sbjct: 364 LVDSGLEKGIGAAKRTVASGGAYLNNEKVEDEGRVITAEDVLPGGVVLFRKGKRQ 418


>gi|209558661|ref|YP_002285133.1| tyrosyl-tRNA synthetase [Streptococcus pyogenes NZ131]
 gi|254783645|sp|B5XJ70|SYY_STRPZ RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|209539862|gb|ACI60438.1| Tyrosyl-tRNA synthetase [Streptococcus pyogenes NZ131]
          Length = 418

 Score =  265 bits (678), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 141/400 (35%), Positives = 221/400 (55%), Gaps = 25/400 (6%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG + Q ++ + L    ++G V+ Y GYD TA SLH GHL  ++    LQ  GHKP 
Sbjct: 7   LKTRGLVFQTTDEQALVKALTEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAGHKPY 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+D  R +   + + E  +KIKG  S+F+ +  G   A ++NN  W
Sbjct: 67  ALVGGATGLIGDPSFKDAERSLQTKETVLEWSDKIKGQLSTFLDFENGDNKAELVNNYDW 126

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
              I +ID LR++G +F+VN M+S +SV+ R+  E  +S+ EF Y I+Q YDF EL   +
Sbjct: 127 FSQISFIDFLRDVGKYFTVNYMMSKDSVKKRI--ETGISYTEFAYQIMQGYDFYELNDKH 184

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
           +  LQ+GGSDQWGN+  G +L  +        +T PL+T ++G K GK+   A+WL+ + 
Sbjct: 185 NVTLQIGGSDQWGNMTAGTELLRKKADKTGHVMTVPLITDSTGKKFGKSEGNAVWLDADK 244

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATEITTM 309
           TSPY  +Q+W N+ D D V F K  T L + EI  +        +E  A+K +A E+ T+
Sbjct: 245 TSPYEMYQFWLNVMDDDAVRFLKIFTFLSLDEIAEIETQFNAARHERLAQKTLAREVVTL 304

Query: 310 VHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGM--------------GLLTL 355
           VHG E  ++A     + F  +I        ++S +E+ +G+               ++ +
Sbjct: 305 VHGEEAYKQALNITEQLFAGNIK-------NLSANELKQGLSNVPNYHVQSIDNHNIVEI 357

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           +V A  + S  +AR  +++ AI IN   + +   Q+   D
Sbjct: 358 LVAAKISPSKRQAREDVQNGAIYINGDRVQDLDYQLSNDD 397


>gi|150003760|ref|YP_001298504.1| putative tyrosyl-tRNA synthetase 1 [Bacteroides vulgatus ATCC 8482]
 gi|254881011|ref|ZP_05253721.1| tyrosyl-tRNA ligase [Bacteroides sp. 4_3_47FAA]
 gi|294777421|ref|ZP_06742872.1| tyrosine--tRNA ligase [Bacteroides vulgatus PC510]
 gi|319640018|ref|ZP_07994745.1| tyrosyl-tRNA synthetase [Bacteroides sp. 3_1_40A]
 gi|189083643|sp|A6KZL8|SYY_BACV8 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|149932184|gb|ABR38882.1| putative tyrosyl-tRNA synthetase 1 [Bacteroides vulgatus ATCC 8482]
 gi|254833804|gb|EET14113.1| tyrosyl-tRNA ligase [Bacteroides sp. 4_3_47FAA]
 gi|294448489|gb|EFG17038.1| tyrosine--tRNA ligase [Bacteroides vulgatus PC510]
 gi|317388296|gb|EFV69148.1| tyrosyl-tRNA synthetase [Bacteroides sp. 3_1_40A]
          Length = 430

 Score =  265 bits (678), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 147/428 (34%), Positives = 229/428 (53%), Gaps = 22/428 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L+ RG +H +    E   L ++  VTAY+G D TA SLH GHL  +M+L   Q+ 
Sbjct: 2   NFVEELTWRGMVHTMMPGTEE--LLAKEQVTAYLGIDPTADSLHIGHLCGVMMLRHFQRC 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD-ALM 125
           GHKP++L+GG T +IGDPS + + R ++  + ++ N+  IK   + F+ + +   + A +
Sbjct: 60  GHKPLALVGGATGMIGDPSGKSQERNLLTEETLRHNVACIKKQLAKFLDFESDAPNKAEL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQAYD 183
           +NN  W+    ++D  RE+G   +VN M++ +SV+ RL  E    LSF EF Y +LQ YD
Sbjct: 120 VNNYDWMKDFTFLDFAREVGKHITVNYMMAKDSVQKRLNGEARDGLSFTEFTYQLLQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ L +   C+LQMGGSDQWGNI  G +L  R    ++FALT PL+T A G K GKT SG
Sbjct: 180 FLHLYETKGCKLQMGGSDQWGNITTGAELIRRTNGGEVFALTCPLITKADGGKFGKTESG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA--KLQGKEINEAKKI 301
            IWL+   TSPY F+Q+W N+ D D   + K  T+L   E++ +     +   +   +K 
Sbjct: 240 NIWLDPRYTSPYKFYQFWLNVSDEDAARYIKIFTSLSQEEVEALTAEHAEAPHLRVLQKR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDEVS 347
           +A E+T MVH  E+   A  A+   F  +                 + +P   +S+D ++
Sbjct: 300 LAKEVTVMVHSEEDYNAAVEASGILFGNATSEALKKLDEDTLLAVFEGVPQFEVSRDALA 359

Query: 348 RGMGLLTLIV-KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+  + L V  A    S  E R+ ++   + +N   +S     I   D      + +  
Sbjct: 360 EGVKAVDLFVDNAAVFASKGEMRKLVQGGGVSLNKEKLSAFDQVITTADLLDEKYLLVQR 419

Query: 407 GKKNHIIC 414
           GKKN+ + 
Sbjct: 420 GKKNYYLV 427


>gi|15674319|ref|NP_268493.1| tyrosyl-tRNA synthetase [Streptococcus pyogenes M1 GAS]
 gi|71909895|ref|YP_281445.1| tyrosyl-tRNA synthetase [Streptococcus pyogenes MGAS5005]
 gi|94993484|ref|YP_601582.1| tyrosyl-tRNA synthetase [Streptococcus pyogenes MGAS10750]
 gi|81534089|sp|Q9A1U3|SYY_STRP1 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|123080153|sp|Q1J8X3|SYY_STRPF RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|13621401|gb|AAK33214.1| putative tyrosine-tRNA ligase [Streptococcus pyogenes M1 GAS]
 gi|71852677|gb|AAZ50700.1| tyrosyl-tRNA synthetase [Streptococcus pyogenes MGAS5005]
 gi|94546992|gb|ABF37038.1| Tyrosyl-tRNA synthetase [Streptococcus pyogenes MGAS10750]
          Length = 418

 Score =  265 bits (678), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 141/400 (35%), Positives = 221/400 (55%), Gaps = 25/400 (6%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG + Q ++ + L    ++G V+ Y GYD TA SLH GHL  ++    LQ  GHKP 
Sbjct: 7   LKARGLVFQTTDEQALVKALTEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAGHKPY 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+D  R +   + + E  +KIKG  S+F+ +  G   A ++NN  W
Sbjct: 67  ALVGGATGLIGDPSFKDAERSLQTKETVLEWSDKIKGQLSTFLDFENGDNKAELVNNYDW 126

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
              I +ID LR++G +F+VN M+S +SV+ R+  E  +S+ EF Y I+Q YDF EL   +
Sbjct: 127 FSQISFIDFLRDVGKYFTVNYMMSKDSVKKRI--ETGISYTEFAYQIMQGYDFYELNDKH 184

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
           +  LQ+GGSDQWGN+  G +L  +        +T PL+T ++G K GK+   A+WL+ + 
Sbjct: 185 NVTLQIGGSDQWGNMTAGTELLRKKADKTGHVMTVPLITDSTGKKFGKSEGNAVWLDADK 244

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATEITTM 309
           TSPY  +Q+W N+ D D V F K  T L + EI  +        +E  A+K +A E+ T+
Sbjct: 245 TSPYEMYQFWLNVMDDDAVRFLKIFTFLSLDEIAEIETQFNAARHERLAQKTLAREVVTL 304

Query: 310 VHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGM--------------GLLTL 355
           VHG E  ++A     + F  +I        ++S +E+ +G+               ++ +
Sbjct: 305 VHGEEAYKQALNITEQLFAGNIK-------NLSANELKQGLSNVPNYHVQSIDNHNIVEI 357

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           +V A  + S  +AR  +++ AI IN   + +   Q+   D
Sbjct: 358 LVAAKISPSKRQAREDVQNGAIYINGDRVQDLDYQLSNDD 397


>gi|258620729|ref|ZP_05715764.1| tyrosyl-tRNA synthetase [Vibrio mimicus VM573]
 gi|258586927|gb|EEW11641.1| tyrosyl-tRNA synthetase [Vibrio mimicus VM573]
          Length = 426

 Score =  265 bits (678), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 160/421 (38%), Positives = 230/421 (54%), Gaps = 13/421 (3%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           F   L +RG I Q S P E  +         Y G+D TA SLH GHL  L++L   Q  G
Sbjct: 6   FFDDLQQRGLIAQ-STPLEALVERFATPQVLYCGFDPTAGSLHIGHLVPLLMLKRFQNAG 64

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT-GKTDALML 126
           H+ I+L+GG T +IGDPSF+   R +  +Q +Q+ +  +    +  +   +   T  + +
Sbjct: 65  HQAIALIGGATGMIGDPSFKANERALNSAQTVQQWVNDLSQQITHLMASQSENPTSLITV 124

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDFV 185
           NN  W+  I  ID  R++G  FSVN M++ ESV+ RL R +Q +SF EF+Y +LQ+YDF 
Sbjct: 125 NNADWIGKINLIDFFRDVGKHFSVNTMINRESVKQRLARPDQGISFTEFSYSLLQSYDFA 184

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L   + C LQ+GG+DQWGNI+ GIDL  RL   ++  LT PL+T + GTK GKT SGA+
Sbjct: 185 HLNLEFGCALQIGGNDQWGNIVSGIDLTRRLNGAEVCGLTLPLITKSDGTKFGKTESGAV 244

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIA 303
           WL    TSPY F+Q+W N DDADV  F    T L  +EI+  R A    +   +A++I+A
Sbjct: 245 WLESSKTSPYRFYQFWLNSDDADVYRFLAYYTFLSTAEIEDIRQADALCEGKPQAQQILA 304

Query: 304 TEITTMVHGRE--EAEKAATAAMECFDMSIHS----QHMPTISISKDEVSRGMGLLTLIV 357
            ++T  VHG E   A +  T A+   D+S  S    + +    +     SR   LL L++
Sbjct: 305 EQVTRFVHGEEGLAAAQRITQALFSGDLSYLSLSELRQLELDGLPCVAASRTDTLLDLLL 364

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            +G A+S  +AR  L + A+++N   +  E +      FD      L  GKK   +  L 
Sbjct: 365 TSGLASSKRQAREWLDNGAVRVNGERVQQEGVLSGFALFDRY--YVLQRGKKQFALIKLE 422

Query: 418 G 418
           G
Sbjct: 423 G 423


>gi|116511241|ref|YP_808457.1| tyrosyl-tRNA synthetase [Lactococcus lactis subsp. cremoris SK11]
 gi|123025595|sp|Q031T7|SYY_LACLS RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|116106895|gb|ABJ72035.1| tyrosyl-tRNA synthetase [Lactococcus lactis subsp. cremoris SK11]
          Length = 419

 Score =  265 bits (678), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 151/418 (36%), Positives = 234/418 (55%), Gaps = 22/418 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG + Q ++   L    ++ +V+ Y+GYD TA SLH G+L  ++ +  LQ  GHKP 
Sbjct: 7   LKARGLVFQTTDEAALSKALTEDMVSYYVGYDPTADSLHLGNLVLILTMKRLQMAGHKPY 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+D  R +     + +   KI+     F+ +  G+  A M NN  W
Sbjct: 67  ALVGGATGLIGDPSFKDSERSLQTKDTVTKWSGKIRSQLERFLDFENGENKAEMTNNYNW 126

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
             ++ +ID LR++G  F+VN M+S +SV+SR+  E  +S+ EF Y I+Q YDF EL + +
Sbjct: 127 FENLTFIDFLRDVGKHFTVNYMISKDSVKSRM--ESGISYTEFAYQIMQGYDFYELNQLH 184

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
           +  LQ+GGSDQWGN+  G +L  R    +   +T PL+T ++G K GK+   AIWL+ + 
Sbjct: 185 NVTLQLGGSDQWGNMTAGTELLRRKANKQGHVITIPLITDSTGKKFGKSEGNAIWLDADK 244

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATEITTM 309
           TSPY  +Q+W N+DDAD V   K  T L + EI  + +      +E  A+K++A E+ ++
Sbjct: 245 TSPYEMYQFWLNVDDADAVKMLKIFTFLSLEEIAEIEEQFEAARHERLAQKVLAREVVSL 304

Query: 310 VHGREEAEKAATAAMECF---DM------SIHS--QHMPTISISKDEVSRGMGLLTLIVK 358
           VHG+E  E+A   +   F   D+      SI +  +  P   I+ DE    + L+ L++ 
Sbjct: 305 VHGKEAYEQAVKTSEILFGGGDLRQLDAKSILTGLKAAPQHQIAPDE---DLTLIELLIS 361

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN--IKLSFGKKNHIIC 414
           AG A S  +AR  + + AI IN   +  ++L   L D D   N    +  GKK + + 
Sbjct: 362 AGIAPSKRQAREDITNGAIYINGERV--QELDYVLTDSDKIENRLTVIRRGKKKNFVL 417


>gi|120404269|ref|YP_954098.1| tyrosyl-tRNA synthetase [Mycobacterium vanbaalenii PYR-1]
 gi|119957087|gb|ABM14092.1| tyrosyl-tRNA synthetase [Mycobacterium vanbaalenii PYR-1]
          Length = 424

 Score =  265 bits (678), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 157/421 (37%), Positives = 239/421 (56%), Gaps = 28/421 (6%)

Query: 10  SILSE---RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           SIL E   RG I Q ++   L    ++G VT Y G+D TA SLHAGHL  L+ L   Q+ 
Sbjct: 4   SILDELEWRGLIAQSTDRDALAEALAEGPVTVYSGFDPTAPSLHAGHLIPLLTLRRFQQA 63

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQE-IQENIEKIKGIFSSFIKYGTGKTDALM 125
           GH+PI L GG T +IGDP  RD   R + + + + +   +I+G    F+++    T A++
Sbjct: 64  GHRPIVLAGGATGMIGDP--RDVGERTLNTADTVADWAGRIRGQLERFVEFDDSPTGAVV 121

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
            NN +W   +  I+ LR++G  FSVN ML  ++VR RL+ E  +S+ EF+YM+LQA D+V
Sbjct: 122 ANNLSWTGELSAIEFLRDVGKHFSVNVMLDRDTVRRRLEGE-GISYTEFSYMLLQANDYV 180

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK-TLSGA 244
           EL + Y C LQ+GGSDQWGNII G+ L  +     + ALT+PL+T + G K GK T  G+
Sbjct: 181 ELHQRYGCTLQVGGSDQWGNIIAGVRLVRQKAGASVHALTTPLVTDSEGKKFGKSTGGGS 240

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKII 302
           +WL+ EMTSPY ++QY+ N  DADV+ + +  T L   E+  + +   +  +E  A++ +
Sbjct: 241 LWLDPEMTSPYAWYQYFINTADADVLPYLRWFTFLSADELVELEQATTERPHERAAQRRL 300

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQ------HMPTISISKDEVSRGM------ 350
           A E+T +VHG     +AATAA+E    ++  +        PT++ +  E S         
Sbjct: 301 ARELTNLVHG-----EAATAAVELASQALFGRAELGELDEPTLAAALREASVAQLAPGGP 355

Query: 351 -GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
             ++ L+V +G + S   ARR +      +NN  I+ ++   +  DF     + L  GK+
Sbjct: 356 DSIIDLLVASGLSASKGAARRTVAEGGAYVNNVKIATDEWIPQASDFLHDRWLVLRRGKR 415

Query: 410 N 410
           N
Sbjct: 416 N 416


>gi|300933445|ref|ZP_07148701.1| hypothetical protein CresD4_05200 [Corynebacterium resistens DSM
           45100]
          Length = 432

 Score =  265 bits (678), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 151/403 (37%), Positives = 228/403 (56%), Gaps = 27/403 (6%)

Query: 3   AFKSDFLSILSERGFIHQISNPRELDILCSQ--GVVTAYIGYDLTASSLHAGHLTQLMLL 60
           + + + +  L  RG + Q +   EL+ L  Q       Y+G+D T  SLHAGHL  L+LL
Sbjct: 6   SVRENLIDELEWRGLVAQST---ELEALREQLDKPTAVYVGFDPTGPSLHAGHLVPLLLL 62

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRR-MMRSQEIQENIEKIKGIFSSFIKYGTG 119
              Q  GHKP +L GG T +IGDP  RD   R M+  +++ +N+E+IKG   +F+++   
Sbjct: 63  RRFQLAGHKPFALAGGATGMIGDP--RDVGERSMLTEEQVADNLERIKGQLRAFLRFEGD 120

Query: 120 KT-----DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEF 174
            T      A ++NN  W   +  ID LR++G  FS+N MLS ++V+ RL+ +  +S+ EF
Sbjct: 121 ATAEDVQGAKLVNNAEWTLKMSVIDFLRDLGKNFSLNTMLSRDTVKRRLEND-GISYTEF 179

Query: 175 NYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG 234
           +YM+LQA DFV L + +D R+Q GGSDQWGNI+ G+DL  RL    +  LT PL+T + G
Sbjct: 180 SYMLLQANDFVHLRREHDVRVQAGGSDQWGNIVSGVDLNRRLDGESVHGLTVPLVTDSEG 239

Query: 235 TKMGK-TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK 293
            K GK T  G +WL+ EMTSPY+++QY+ N  DADV+ + +  T L   EI+R+     +
Sbjct: 240 NKFGKSTGGGKLWLDPEMTSPYSWYQYFFNSADADVIRYLRWFTFLGREEIERLEGEVAE 299

Query: 294 EI--NEAKKIIATEITTMVHGREEAEKAATAAMECF--------DMSIHSQHMPTISISK 343
                EA++++A E+T +VHG E   K   AA   F        D S  +  +    ++ 
Sbjct: 300 RPFKREAQRVLAQEMTKLVHGEEAVAKVELAAQALFGRAELADLDESTLAAALQETEVA- 358

Query: 344 DEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISN 386
            +VS    ++ L+V +G  +S   ARR +      +NN  I +
Sbjct: 359 -DVSADATIVDLLVASGLESSKGAARRTVNEGGAYVNNVRIED 400


>gi|296140090|ref|YP_003647333.1| tyrosyl-tRNA synthetase [Tsukamurella paurometabola DSM 20162]
 gi|296028224|gb|ADG78994.1| tyrosyl-tRNA synthetase [Tsukamurella paurometabola DSM 20162]
          Length = 422

 Score =  265 bits (678), Expect = 9e-69,   Method: Compositional matrix adjust.
 Identities = 149/397 (37%), Positives = 228/397 (57%), Gaps = 16/397 (4%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +D L  LS RG I Q ++   L    + G +T Y G+D TASSLHAGHL QL+ L   Q+
Sbjct: 3   ADILEELSWRGLIAQSTDLEALRERLAAGPITLYAGFDPTASSLHAGHLVQLLTLRRFQE 62

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQE-IQENIEKIKGIFSSFIKYGTGKTDAL 124
            GH+PI L GG T  +GDP  RD   R+M S + + E   KI      F+ +  G+  A+
Sbjct: 63  AGHRPIVLGGGATGQVGDP--RDVGERVMNSVDTVAEWAAKIDTQLQRFVSF-EGENAAI 119

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           ++NN  W   +     LR++G  FS+N ML+ ++V+ RL+ +  +S+ EF+YM+LQAYD+
Sbjct: 120 LVNNLDWHGQMNVPTFLRDVGKHFSINVMLARDTVKRRLESD-GISYTEFSYMLLQAYDY 178

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK-TLSG 243
           VELA+ YD  LQ GGSDQWGNI+ G+DL  ++    + ALT+ L+T++ G K GK T  G
Sbjct: 179 VELARRYDAALQTGGSDQWGNIVAGVDLNRKIDGRHVHALTTQLVTSSDGKKFGKSTGGG 238

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKI 301
           ++WL+ E+TSPY ++QY+ N  DADV+ + +  T L   EID + +   +  +   A+K 
Sbjct: 239 SLWLDPELTSPYAWYQYFVNTADADVIRYLRWFTFLSKDEIDELERETTEAPQKRTAQKR 298

Query: 302 IATEITTMVHGREEAEKAATAAMECF---DM-----SIHSQHMPTISISKDEVSRGMGLL 353
           +A E+TT+VHG ++      A+   F   D+     S  +  +   S+++        ++
Sbjct: 299 LAAEMTTLVHGADQTRAVELASQALFGRGDLADLPESTLAAALEEASVAEVRAGEPRTIV 358

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQ 390
            L+V  G + S   ARR ++      NN  I +E  +
Sbjct: 359 DLLVATGLSDSKGAARRAVREGGAYANNVKIESEDWE 395


>gi|261210042|ref|ZP_05924340.1| tyrosyl-tRNA synthetase [Vibrio sp. RC341]
 gi|260840807|gb|EEX67349.1| tyrosyl-tRNA synthetase [Vibrio sp. RC341]
          Length = 426

 Score =  265 bits (678), Expect = 9e-69,   Method: Compositional matrix adjust.
 Identities = 161/422 (38%), Positives = 232/422 (54%), Gaps = 23/422 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG I Q S P E  +         Y G+D TA SLH GHL  L++L   Q  GH+ I
Sbjct: 10  LQQRGLIAQ-STPLEALVERFATSQVLYCGFDPTAGSLHIGHLVPLLMLKRFQNAGHQAI 68

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM-LNNET 130
           +L+GG T +IGDPSF+   R +  +Q +Q+ +  +    +  +   +    +LM +NN  
Sbjct: 69  ALIGGATGMIGDPSFKANERVLNSAQTVQQWVSDLSQQITQLMASQSENCASLMTVNNAD 128

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDFVELAK 189
           W+  I  ID  R++G  FSVN M++ ESV+ RL R +Q +SF EF+Y +LQ+YDF  L +
Sbjct: 129 WIGKINLIDFFRDVGKHFSVNAMINRESVKQRLARPDQGISFTEFSYSLLQSYDFAHLNR 188

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
            + C LQ+GG+DQWGNI+ GIDL  RL   ++  LT PL+T + GTK GKT SGA+WL  
Sbjct: 189 EFGCALQIGGNDQWGNIVSGIDLTRRLNGTEVGGLTLPLITKSDGTKFGKTESGAVWLES 248

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEIT 307
             TSPY F+Q+W N DDADV  F    T L  +EI+  R A        +A++I+A ++T
Sbjct: 249 SKTSPYRFYQFWLNSDDADVYRFLAYYTFLSTAEIEDIRQADALRTGKPQAQQILAEQVT 308

Query: 308 TMVHGRE--EAEKAATAAMECFDMS---------IHSQHMPTISISKDEVSRGMGLLTLI 356
             VHG E   A +  T A+   D+S         +    +P ++      SR   LL L+
Sbjct: 309 RFVHGEEGLAAAQRITQALFSGDVSYLTLSELRQLELDGLPCVA-----ASRSDTLLDLL 363

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           + +G A+S  +AR  L++ AI++N   +  E +      FD      L  GKK   +  L
Sbjct: 364 LTSGLASSKRQAREWLENGAIRVNGERVQQEGVLSGFALFDRY--YVLQRGKKQFALIKL 421

Query: 417 CG 418
            G
Sbjct: 422 EG 423


>gi|37677009|ref|NP_937405.1| tyrosyl-tRNA synthetase [Vibrio vulnificus YJ016]
 gi|320159093|ref|YP_004191471.1| tyrosyl-tRNA synthetase, cluster 1 [Vibrio vulnificus MO6-24/O]
 gi|81755134|sp|Q7MCN7|SYY1_VIBVY RecName: Full=Tyrosyl-tRNA synthetase 1; AltName:
           Full=Tyrosine--tRNA ligase 1; Short=TyrRS 1
 gi|37201553|dbj|BAC97375.1| Tyrosyl-tRNA synthetase [Vibrio vulnificus YJ016]
 gi|319934405|gb|ADV89268.1| tyrosyl-tRNA synthetase cluster 1 [Vibrio vulnificus MO6-24/O]
          Length = 422

 Score =  265 bits (678), Expect = 9e-69,   Method: Compositional matrix adjust.
 Identities = 144/378 (38%), Positives = 222/378 (58%), Gaps = 11/378 (2%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L++RG I Q ++  +L  L  Q   T Y G+D TA SLH GHL  L++L   Q  GH+ I
Sbjct: 10  LAQRGLIAQTTDLEQLIALFRQ-PQTLYCGFDPTAGSLHIGHLVPLIMLKRFQDAGHQGI 68

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+   R +  ++ +   +  +       +     +   +M+NN  W
Sbjct: 69  ALIGGATGMIGDPSFKASERSLNSAETVAAWVNALATQIQQLMTPHLTQP-LVMVNNADW 127

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDFVELAKN 190
           + SI  I   R+IG  FSVN M+  ESV+ RL R +Q +SF EF+Y +LQ+YDF +L + 
Sbjct: 128 MQSIGVIAFFRDIGKHFSVNAMIQRESVKQRLARPDQGISFTEFSYSLLQSYDFAQLNQT 187

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKE 250
           + C LQ+GG+DQWGNI+ GIDL  RL    +  LT PL+T + GTK GKT  GAIWL+  
Sbjct: 188 HQCALQIGGNDQWGNIVSGIDLTRRLNGTTVHGLTLPLITKSDGTKFGKTEGGAIWLDAA 247

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATEITT 308
            TSPY F+Q+W N DDADV  F +  T L + +I+++      ++ +  A++I+A E+T 
Sbjct: 248 KTSPYMFYQFWLNCDDADVYRFLRYYTFLSVEQIEQIEATDKAQVGKPSAQRILAEEMTR 307

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTI-SISKD-----EVSRGMGLLTLIVKAGFA 362
            VHG    E A   +   F   ++  ++  +  + +D     +++    ++TL+++ G A
Sbjct: 308 FVHGHAGLESAQRISQALFSGQLNQLNLAELKQLEQDGLPCRQLAHVSDVVTLLLETGLA 367

Query: 363 TSTNEARRHLKSNAIKIN 380
           +S  +AR  L++ AI+IN
Sbjct: 368 SSKRQAREWLENGAIRIN 385


>gi|156977732|ref|YP_001448638.1| tyrosyl-tRNA synthetase [Vibrio harveyi ATCC BAA-1116]
 gi|156529326|gb|ABU74411.1| hypothetical protein VIBHAR_06520 [Vibrio harveyi ATCC BAA-1116]
          Length = 418

 Score =  265 bits (677), Expect = 9e-69,   Method: Compositional matrix adjust.
 Identities = 150/400 (37%), Positives = 225/400 (56%), Gaps = 22/400 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG + Q S+  ++  L S+   T Y G+D TA SLH GHL  L++L   Q  GH+ I
Sbjct: 7   LQARGLVAQASDLDQVQQLLSE-PQTLYCGFDPTAGSLHIGHLVPLIMLKRFQDAGHQAI 65

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+   R +   + +   ++ +       +     K   +M+NN  W
Sbjct: 66  ALIGGATGMIGDPSFKATERSLNSEETVTGWVQDLSNQIQQLMNNQVSKP-MIMVNNADW 124

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDFVELAKN 190
           +  I  ID  R++G  FSVN M+S ESV+ RL+R +Q +SF EF+Y +LQ+YDF EL + 
Sbjct: 125 VKQINVIDFFRDVGKHFSVNTMISRESVKQRLQRPDQGISFTEFSYALLQSYDFAELNRQ 184

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKE 250
           Y CRLQ+GG+DQWGN + GIDL  R    ++F LT PL+T + GTK GKT  GA+WL+  
Sbjct: 185 YGCRLQIGGNDQWGNSVSGIDLTRRQNGEQVFGLTLPLITKSDGTKFGKTEGGAVWLDPS 244

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN---EAKKIIATEIT 307
            TSPY F+Q+W + +DADV  F +  T L   EI  + + Q KE     +A++I+A ++T
Sbjct: 245 KTSPYAFYQFWLSAEDADVYHFLRYYTFLSCDEIAAI-EAQDKESKGKPQAQRILAEQMT 303

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISK----------DEVSRGMGLLTLIV 357
             VHG E       A+ E    ++ S ++  +S+S+             S    L+ L+V
Sbjct: 304 RFVHGEE-----GLASAERITQALFSGNVQQLSLSELKQLELDGLPSMQSAEQDLVELLV 358

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
           ++G A S   AR  + +NAI ++   +  +   +    FD
Sbjct: 359 ESGLANSKRIARELIGNNAISVSGEKVDAQTPSLNFPLFD 398


>gi|254231884|ref|ZP_04925211.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis C]
 gi|124600943|gb|EAY59953.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis C]
          Length = 497

 Score =  265 bits (677), Expect = 9e-69,   Method: Compositional matrix adjust.
 Identities = 151/406 (37%), Positives = 230/406 (56%), Gaps = 25/406 (6%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  LS RG I Q ++   L     +G +T Y G+D TA SLHAGHL  L+ L   Q+ G
Sbjct: 5   ILDELSWRGLIAQSTDLDTLAAEAQRGPMTVYAGFDPTAPSLHAGHLVPLLTLRRFQRAG 64

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQE-IQENIEKIKGIFSSFIKYGTGKTDALML 126
           H+PI L GG T +IGDP  RD   R +   + + E  E+I+G    F+ +      A++ 
Sbjct: 65  HRPIVLAGGATGMIGDP--RDVGERSLNEADTVAEWTERIRGQLERFVDFDDSPMGAIVE 122

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W  S+  I+ LR+IG  FSVN ML+ +++R RL  E  +S+ EF+Y++LQA D+VE
Sbjct: 123 NNLEWTGSLSAIEFLRDIGKHFSVNVMLARDTIRRRLAGE-GISYTEFSYLLLQANDYVE 181

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK-TLSGAI 245
           L + + C LQ+GG+DQWGNII G+ L  +     + ALT PL+T A GTK GK T  G++
Sbjct: 182 LHRRHGCTLQIGGADQWGNIIAGVRLVRQKLGATVHALTVPLVTAADGTKFGKSTGGGSL 241

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKKIIA 303
           WL+ +MTSPY ++QY+ N  DADV+ + +  T L   E+  +  A  Q  +   A++ +A
Sbjct: 242 WLDPQMTSPYAWYQYFVNTADADVIRYLRWFTFLSADELAELEQATAQRPQQRAAQRRLA 301

Query: 304 TEITTMVHGREEAEKAATAAMEC-------------FDMSIHSQHMPTISISKDEVSRGM 350
           +E+T +VHG     +AATAA+E               D +  +  +   ++++ +     
Sbjct: 302 SELTVLVHG-----EAATAAVEHASRALFGRGELARLDEATLAAALRETTVAELKPGSPD 356

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
           G++ L+V +G + S   ARR +    + +NN  + NE+   +  DF
Sbjct: 357 GIVDLLVASGLSASKGAARRTIHEGGVSVNNIRVDNEEWVPQSSDF 402


>gi|258625613|ref|ZP_05720495.1| tyrosyl-tRNA synthetase [Vibrio mimicus VM603]
 gi|258582115|gb|EEW06982.1| tyrosyl-tRNA synthetase [Vibrio mimicus VM603]
          Length = 426

 Score =  265 bits (677), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 162/426 (38%), Positives = 231/426 (54%), Gaps = 23/426 (5%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           F   L +RG I Q S P E  +         Y G+D TA SLH GHL  L++L   Q  G
Sbjct: 6   FFDDLQQRGLIAQ-STPLEALVERFATPQVLYCGFDPTAGSLHIGHLVPLLMLKRFQNAG 64

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT-GKTDALML 126
           H+ I+L+GG T +IGDPSF+   R +  +Q +Q+ +  +    +  +   +   T  + +
Sbjct: 65  HQAIALIGGATGMIGDPSFKANERALNSAQTVQQWVNDLSQQITHLMASQSENPTSLITV 124

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDFV 185
           NN  W+  I  ID  R++G  FSVN M++ ESV+ RL R +Q +SF EF+Y +LQ+YDF 
Sbjct: 125 NNADWIGKINLIDFFRDVGKHFSVNTMINRESVKQRLARPDQGISFTEFSYSLLQSYDFA 184

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L + + C LQ+GG+DQWGNI+ GIDL  RL   ++  LT PL+T + GTK GKT SGA+
Sbjct: 185 HLNREFGCALQIGGNDQWGNIVSGIDLTRRLNGAEVCGLTLPLITKSDGTKFGKTESGAV 244

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIA 303
           WL    TSPY F+Q+W N DDADV  F    T L  +EI+  R A        +A++I+A
Sbjct: 245 WLESSKTSPYRFYQFWLNSDDADVYRFLAYYTFLSTAEIEEIRQADTLRSGKPQAQQILA 304

Query: 304 TEITTMVHGRE--EAEKAATAAMECFDMSIHS---------QHMPTISISKDEVSRGMGL 352
             +T  VHG E   A +  T A+   D+S  S           +P ++      SR   L
Sbjct: 305 EHVTRFVHGEEGLAAAQRITQALFSGDVSYLSLSELSQLELDGLPCVA-----ASRTDTL 359

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           L L++ +G A+S  +AR  L++ AI++N   +  E +      FD      L  GKK   
Sbjct: 360 LDLLLTSGLASSKRQAREWLENGAIRVNGERVLQEGVLSGFALFDRY--YVLQRGKKQFA 417

Query: 413 ICHLCG 418
           +  L G
Sbjct: 418 LIKLDG 423


>gi|254445843|ref|ZP_05059319.1| tyrosyl-tRNA synthetase [Verrucomicrobiae bacterium DG1235]
 gi|198260151|gb|EDY84459.1| tyrosyl-tRNA synthetase [Verrucomicrobiae bacterium DG1235]
          Length = 428

 Score =  265 bits (677), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 148/419 (35%), Positives = 228/419 (54%), Gaps = 16/419 (3%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L  L  RG ++  +   EL     +G ++ Y G+D TA SLH G+L  L+ L   Q  GH
Sbjct: 4   LEDLHWRGLVNDCTAAEELAKRLEEGPISLYAGFDPTADSLHVGNLVPLIGLRRFQNYGH 63

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG-KTDALMLN 127
           KPI+L GG T  IGDPS +   R+++  + +  NI +++   +  + +    +  A +++
Sbjct: 64  KPIALAGGATGSIGDPSGKKSERQLLTKEVLDHNIAQVRVQLTRLLDFSEDIENTAKLVD 123

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQS-LSFLEFNYMILQAYDFVE 186
           N +W+  I ++D LR+ G + +VN M+S +SV+SR+  E+S +SF EF+YM+LQ YDF  
Sbjct: 124 NASWMSQISFLDFLRDTGKYITVNSMVSKDSVKSRMGDEKSGISFTEFSYMLLQGYDFYH 183

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L +   C LQ+GGSDQWGNI  G +L  +     ++ LT PL+T + G+K GK+  GAIW
Sbjct: 184 LNQAESCELQIGGSDQWGNITVGTELTRKKAGNTVYGLTLPLITNSDGSKFGKSEKGAIW 243

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIAT 304
           L+   TS Y F+QY+ N+DD DVV + K  T L   +I  + K   +      A   +AT
Sbjct: 244 LDPAKTSVYRFYQYFVNVDDRDVVRYLKFFTFLSQEQIAELEKQHAENPGARVAHHALAT 303

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIH----------SQHMPTISISKDEVSRGMGLLT 354
           E+T ++HG    + A TA+   F   +           +  +PT  IS D+++   GLL 
Sbjct: 304 EMTNLIHGEHATQDAITASKILFGGGLDGISENALANVAGEIPTAKISADKLASEDGLLL 363

Query: 355 L--IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           L  +V  G + S  EA++ +K     +NN  I     ++   D      I L  GKKN+
Sbjct: 364 LDALVDTGLSNSRGEAKKAVKEGGAYVNNQRIQEMGYKLSDSDVHYGKYILLRRGKKNY 422


>gi|255543457|ref|XP_002512791.1| tyrosyl-tRNA synthetase, putative [Ricinus communis]
 gi|223547802|gb|EEF49294.1| tyrosyl-tRNA synthetase, putative [Ricinus communis]
          Length = 492

 Score =  265 bits (677), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 153/430 (35%), Positives = 239/430 (55%), Gaps = 20/430 (4%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           + + + IL ERG +  +++   L   CS   +  Y G+D TA SLH G+L  +++L W Q
Sbjct: 64  RQNVVDILEERGLLESVTSD-NLRSACSISTLKVYCGFDPTAESLHLGNLIGIIVLSWFQ 122

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + GHK  +L+GG T  IGDPS +   R  +    +++NI  I    +         ++ +
Sbjct: 123 RCGHKAFALIGGATGRIGDPSGKSSERPELDLDSLEKNIIGISNTLTRIFNADVNLSNPI 182

Query: 125 M-LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           + LNN  W   +K +D L+++G +  V  M+  ESV+ RL+ EQ +S+ EF+Y +LQ +D
Sbjct: 183 VVLNNYDWWKDVKLLDFLKQVGRYARVGTMIGKESVKKRLESEQGMSYTEFSYQLLQGFD 242

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP----KLFALTSPLLTTASGTKMGK 239
           F+ L KN    +++GGSDQWGNI  G +L  ++  P    + + LT PLL  + GTK GK
Sbjct: 243 FLHLFKNKGVNVEIGGSDQWGNITAGTELIRKILQPEDGAEAYGLTFPLLLKSDGTKFGK 302

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEIN 296
           +  GAIWL+    SPY F+QY+ +I D DV+ F K LT L + EI   +R  K  G   N
Sbjct: 303 SEDGAIWLSPSFLSPYKFYQYFFSIADDDVIRFLKILTFLELDEIAELEREMKRPGYVPN 362

Query: 297 EAKKIIATEITTMVHGRE---EAEKAATAAMECFDMSIH-------SQHMPTISISKDEV 346
            A++ +A E+T  VHG++   EA KA  A     +  +        ++ +P+ S++ D+V
Sbjct: 363 TAQRRLAEEVTRFVHGQDGLLEAIKATEALRPGAETKLDWKTIEGIAEDVPSCSLAYDQV 422

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
              + L+ L V AG   S + ARR LK   + +NNS + +E  +++ QD      + LS 
Sbjct: 423 -LNLSLVDLSVTAGLIDSKSAARRLLKQGGLYLNNSRVDSESKRVESQDIVEGKVLLLSA 481

Query: 407 GKKNHIICHL 416
           GKKN +I  +
Sbjct: 482 GKKNKVIVRI 491


>gi|315656493|ref|ZP_07909382.1| tyrosine--tRNA ligase [Mobiluncus curtisii subsp. holmesii ATCC
           35242]
 gi|315493052|gb|EFU82654.1| tyrosine--tRNA ligase [Mobiluncus curtisii subsp. holmesii ATCC
           35242]
          Length = 425

 Score =  265 bits (677), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 146/415 (35%), Positives = 236/415 (56%), Gaps = 13/415 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           SD +  L+ RG I Q ++   L    S+G +T Y G+D TA+SLH GHL QL+++  LQ 
Sbjct: 7   SDLIDKLTWRGLIKQHTDMDALRRALSEGPLTFYCGFDPTAASLHHGHLVQLIMMRHLQL 66

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH PI+L+GG T +IGDP    E R++   + +    ++++     F+ +  G   A M
Sbjct: 67  AGHHPIALVGGATGLIGDPRMTAE-RQLQDKETVAGWADRLQCQIERFLDF-EGGNPARM 124

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  W   +  IDLLR++G  F +  ML+ ++V  RLK ++ +SF EF+Y ILQA D++
Sbjct: 125 VNNLEWTAPLSAIDLLRDLGKNFRMGTMLAKDAVARRLKSDEGISFTEFSYQILQANDYL 184

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           +L + Y   L+ GG+DQWGN++ G+DL  +++   +  +T+PL+T + GTK GK+  GAI
Sbjct: 185 QLYRKYGVTLETGGNDQWGNLVGGMDLIRKIEGKDVHVMTTPLITKSDGTKFGKSEGGAI 244

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE---INEAKKII 302
           WL+ EM SPY F+Q+W N +DADVV+  K  T L   EI+ + + + KE      A++ +
Sbjct: 245 WLDPEMFSPYAFYQFWLNTEDADVVNLLKVFTFLSRGEIEAL-ETETKENPGKRAAQRAL 303

Query: 303 ATEITTMVHGREEAEKAATAAMECF------DMSIHSQHMPTISISKDEVSRGM-GLLTL 355
           A  +TT+VHG ++ E+   A+   F      ++   +    T+ + + +V  G   +L L
Sbjct: 304 AEAVTTLVHGADQTERVKAASTALFGRGDLREVDGKTLVAATVDLPRTQVVLGQTNILHL 363

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
           +V +G       A+R + S    +NN  + +E   I  +D    G +    GK+ 
Sbjct: 364 LVDSGLEKGIGAAKRTVASGGAYLNNEKVEDEGRVITAEDVLPGGVVLFRKGKRQ 418


>gi|253564535|ref|ZP_04841992.1| tyrosyl-tRNA synthetase [Bacteroides sp. 3_2_5]
 gi|251948311|gb|EES88593.1| tyrosyl-tRNA synthetase [Bacteroides sp. 3_2_5]
 gi|301161140|emb|CBW20678.1| putative tyrosyl-tRNA synthetase 1 [Bacteroides fragilis 638R]
          Length = 430

 Score =  265 bits (676), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 154/431 (35%), Positives = 229/431 (53%), Gaps = 30/431 (6%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG +H +    E   L ++  VTAY+G D TA SLH GHL  +M+L   Q+ 
Sbjct: 2   NFVEELRWRGMVHDMMPGTEE--LLAKEQVTAYVGIDPTADSLHIGHLCGVMILRHFQRC 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD-ALM 125
           GHKP++L+GG T +IGDPS +   R ++  + ++ N   IK   + F+ + +   + A +
Sbjct: 60  GHKPLALIGGATGMIGDPSGKSAERNLLDEETLRHNQACIKKQLAKFLDFESDAPNRAEL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQAYD 183
           +NN  W+    ++D  RE+G   +VN M++ ESV+ RL  E    LSF EF Y +LQ YD
Sbjct: 120 VNNYDWMKEFTFLDFAREVGKHITVNYMMAKESVKKRLNGEARDGLSFTEFTYQLLQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ L +   C+LQMGGSDQWGNI  G +L  R    + +ALT PL+T A G K GKT SG
Sbjct: 180 FLHLYETKGCKLQMGGSDQWGNITTGTELIRRTNGGEAYALTCPLITKADGGKFGKTESG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEA----- 298
            IWL+   TSPY F+Q+W N+ DAD   + K  T+L  +EID +      E NEA     
Sbjct: 240 NIWLDPRYTSPYKFYQFWLNVSDADAERYIKIFTSLDKAEIDGLV----AEHNEAPHLRV 295

Query: 299 -KKIIATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISK 343
            +K +A E+T MVH  E+   A  A+   F  +                 + +P   IS+
Sbjct: 296 LQKRLAKEVTVMVHSEEDYNAAVDASNILFGNATSDALKKLDEDTLLAVFEGVPQFEISR 355

Query: 344 DEVSRGMGLLTLIV-KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNI 402
           D ++ G+  + L V  A    S  E R+ ++   + +N   ++     I   D      +
Sbjct: 356 DALAEGVKAVDLFVDNAAVFASKGEMRKLVQGGGVSLNKEKLAAFDQVITTADLLDEKYL 415

Query: 403 KLSFGKKNHII 413
            +  GKKN+ +
Sbjct: 416 LVQRGKKNYYL 426


>gi|226306757|ref|YP_002766717.1| tyrosyl-tRNA synthetase [Rhodococcus erythropolis PR4]
 gi|226185874|dbj|BAH33978.1| tyrosyl-tRNA synthetase [Rhodococcus erythropolis PR4]
          Length = 425

 Score =  265 bits (676), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 150/416 (36%), Positives = 227/416 (54%), Gaps = 15/416 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + L  L+ RG I Q ++   L      G VT Y G+D T  SLHAGHL  L+ L   Q+ 
Sbjct: 4   NILDELTWRGLIAQSTDLDALRKDLEAGPVTLYAGFDPTGPSLHAGHLVPLLALKRFQRA 63

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQE-IQENIEKIKGIFSSFIKYGTGKTDALM 125
           G++PI L GG T +IGDP  RD   R M S + + +   +I+G    F+ +    T A++
Sbjct: 64  GNRPIVLAGGATGLIGDP--RDVGERTMNSADTVADWAGRIRGQLERFVDFDDSPTSAVI 121

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
            NN  W   +  ID LR++G  FSVN ML+ ++V+ RL+ +  +S+ EF+YM+LQA D++
Sbjct: 122 ENNMNWTGKMSAIDFLRDVGKHFSVNVMLARDTVKRRLESD-GMSYTEFSYMLLQANDYL 180

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK-TLSGA 244
            L ++  C LQ+GGSDQWGNII G++L  R+    + A+T PL+T+A G K GK T  G+
Sbjct: 181 HLRRDLGCTLQVGGSDQWGNIIAGVELNRRVDGESVHAMTVPLVTSADGKKFGKSTGGGS 240

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKKII 302
           +WL+ EMTSPY ++QY+ N  DADV+ + +  T L   E+  +  A  +     EA+K +
Sbjct: 241 LWLDPEMTSPYAWYQYFVNTGDADVIKYLRWFTFLTADELAELETATAERPHAREAQKRL 300

Query: 303 ATEITTMVHGREEAEKAATAAMECF--------DMSIHSQHMPTISISKDEVSRGMGLLT 354
           A E+TT+VHG         A+   F        D S  +  +   S+S+        ++ 
Sbjct: 301 AAEMTTLVHGEHNTRAVELASQALFGKAELAELDESTLAAALKEASVSELAPGEPRTIID 360

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
           L+V +G   S   ARR +K     +NN  +S +  +    D      + +  GK+N
Sbjct: 361 LLVTSGLCESKGAARRAVKEGGASVNNQKVSADDWEPAASDLLHGSWLVVRRGKRN 416


>gi|237724367|ref|ZP_04554848.1| tyrosyl-tRNA synthetase [Bacteroides sp. D4]
 gi|229437236|gb|EEO47313.1| tyrosyl-tRNA synthetase [Bacteroides dorei 5_1_36/D4]
          Length = 430

 Score =  265 bits (676), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 148/428 (34%), Positives = 230/428 (53%), Gaps = 22/428 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L+ RG +H +  P   ++L  + V TAY+G D TA SLH GHL  +M+L   Q+ 
Sbjct: 2   NFVEELTWRGMVHTMM-PGTEELLAKEQV-TAYLGIDPTADSLHIGHLCGVMMLRHFQRC 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD-ALM 125
           GHKP++L+GG T +IGDPS + + R ++  + ++ N+  IK   + F+ + +   + A +
Sbjct: 60  GHKPLALVGGATGMIGDPSGKSQERNLLTEETLRHNVACIKKQLAKFLDFESDAPNKAEL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQAYD 183
           +NN  W+    ++D  REIG   +VN M++ +SV+ RL  E    LSF EF Y +LQ YD
Sbjct: 120 VNNYDWMKDFTFLDFAREIGKHITVNYMMAKDSVQKRLNGEARDGLSFTEFTYQLLQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ L +   C+LQMGGSDQWGNI  G +L  R    ++FALT PL+T A G K GKT SG
Sbjct: 180 FLHLYETKGCKLQMGGSDQWGNITTGAELIRRTNGGEVFALTCPLITKADGGKFGKTESG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA--KLQGKEINEAKKI 301
            IWL+   TSPY F+Q+W N+ D D   + K  T+L   E++ +     +   +   +K 
Sbjct: 240 NIWLDPRYTSPYKFYQFWLNVSDEDAARYIKIFTSLSQEEVEALTAEHAEAPHLRVLQKR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDEVS 347
           +A E+T MVH  E+   A  A+   F  +                 + +P   +SKD ++
Sbjct: 300 LAKEVTVMVHSEEDYNAAVEASGILFGNATSEALKKLDEDTLLAVFEGVPQFEVSKDVLA 359

Query: 348 RGMGLLTLIV-KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+  + L V  A    S  E R+ ++   + +N   ++     I   D      + +  
Sbjct: 360 EGVKAVDLFVDNAAVFASKGEMRKLVQGGGVSLNKEKLNAFDQVITTADLLDGKYLLVQR 419

Query: 407 GKKNHIIC 414
           GKKN+ + 
Sbjct: 420 GKKNYYLV 427


>gi|21672404|ref|NP_660471.1| tyrosyl-tRNA synthetase [Buchnera aphidicola str. Sg (Schizaphis
           graminum)]
 gi|25009419|sp|Q8KA14|SYY_BUCAP RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|21623012|gb|AAM67682.1| tyrosyl-tRNA synthetase [Buchnera aphidicola str. Sg (Schizaphis
           graminum)]
          Length = 422

 Score =  265 bits (676), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 152/418 (36%), Positives = 230/418 (55%), Gaps = 9/418 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D ++ L +R  I  I+N  +L  L     ++ Y G+D T  SLH GHL  L+ L   Q  
Sbjct: 2   DLINELHQRNLIFHITNENKLKELIKNKYISLYCGFDPTEDSLHVGHLLPLITLKRFQVL 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKPI L+GG TS+IGDPSF+ + R +     +++   KI    S F+ + +    A++L
Sbjct: 62  GHKPIVLIGGATSLIGDPSFKTKERLLKSDSFVEKCTLKISQQISFFLDFNSNFNSAIIL 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDFV 185
           NN  W   I  +  LR++G +FSVN +++ E+V+ R+KR +Q +SF EF+Y +LQAYDF 
Sbjct: 122 NNNLWFKKINILQFLRDVGKYFSVNALINREAVKKRIKRSDQGISFTEFSYNLLQAYDFF 181

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L +     LQ+GGSDQWGNI  G+ L  R+   + + LT PLL  ++G K GKT SG +
Sbjct: 182 ILNQKNQVSLQIGGSDQWGNISSGMHLIHRISKKEAYGLTLPLLMQSNGIKFGKTESGTV 241

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIA 303
           WL+ + T+PY F+Q+W NI+D++V  F K  T + + EI+   K   +  +I   K ++A
Sbjct: 242 WLDPQKTTPYRFYQFWMNIEDSNVYRFLKLFTFIDIHEINEREKNSYKKNQIVSDKVLLA 301

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI-SISKD-----EVSRGMGLLTLIV 357
             +T +VHG E+   A       F  +I+   +  +  + KD     E  +   L   +V
Sbjct: 302 KHMTRLVHGDEKLSAAERITNILFFKNINDIQISDLEQLRKDGVPVVETYKIKDLQEALV 361

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            +  A S  +A+  + SN+I IN   I N+   I   D        LS GKKNH + +
Sbjct: 362 LSSLAQSRTQAKNMIISNSISINTKKIVNKNYIIDDNDKLFNQFTLLSRGKKNHCLIY 419


>gi|328881503|emb|CCA54742.1| Tyrosyl-tRNA synthetase cluster 1 [Streptomyces venezuelae ATCC
           10712]
          Length = 422

 Score =  265 bits (676), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 147/423 (34%), Positives = 234/423 (55%), Gaps = 13/423 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +D +  L  RG   Q ++   L    + G VT Y G+D TA+SLH GHL Q++ +  LQ+
Sbjct: 2   TDIVDELKWRGLFAQSTDEDALRKALADGPVTFYCGFDPTAASLHVGHLVQVLTVRRLQQ 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN-IEKIKGIFSSFIKYGTGKTDAL 124
            GH+P++L+GG T  IGDP  R  + R +   E   N + +++     F+ +  G+  A+
Sbjct: 62  AGHRPLALVGGATGQIGDP--RPTAERTLNDPETVANWVNRLRSQIEPFLSF-EGENAAV 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M+NN  W   +  I+ LR+IG  F VN+ML+ +SV  RL+ EQ +S+ EF+Y +LQ  DF
Sbjct: 119 MVNNLDWTAGMSAIEFLRDIGKHFRVNKMLTKDSVARRLESEQGISYTEFSYQLLQGMDF 178

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT-PKLFALTSPLLTTASGTKMGKTLSG 243
           +EL + Y C LQ GGSDQWGN++ G+DL  RL+   ++ AL +PL+  A GTK GKT  G
Sbjct: 179 LELYRRYGCTLQQGGSDQWGNLVAGLDLIHRLEPGAEVHALATPLMVKADGTKFGKTEGG 238

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE--INEAKKI 301
           A+WL+ EMT+PY F+Q+W N+DD D+ ++ + L+     E++ +     +      A++ 
Sbjct: 239 AVWLDPEMTTPYAFYQFWLNVDDRDISTYMRILSFKSREELEELEAQTAERPQARAAQRA 298

Query: 302 IATEITTMVHGREE------AEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTL 355
           +A E+TT+VHG ++      A KA     E  ++   +       +    V+    ++ L
Sbjct: 299 LAEELTTLVHGADQCAAVINASKALFGQGELTELDEATLAAALSELPHARVTELGQVVDL 358

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
             + G A S + ARR +K     +NN  ++ E  ++  ++      + L  GKKN     
Sbjct: 359 FTEVGLAPSKSGARRTVKEGGAYVNNVKVTAEDAEVSAEELLHGRWLVLRRGKKNLAAIE 418

Query: 416 LCG 418
             G
Sbjct: 419 FAG 421


>gi|315182414|gb|ADT89327.1| tyrosyl-tRNA synthetase [Vibrio furnissii NCTC 11218]
          Length = 420

 Score =  265 bits (676), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 153/405 (37%), Positives = 224/405 (55%), Gaps = 31/405 (7%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L+ RG I Q ++  EL  L S+   T Y G+D TA SLH GHL  L++L   Q  GH+ I
Sbjct: 10  LTARGLIAQSTSLDELTALFSE-PQTLYCGFDPTAGSLHIGHLVPLLMLKRFQDAGHQAI 68

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKG-IFSSFIKYGTGKTDALMLNNET 130
           +L+GG T +IGDPSF+   R +  +Q +Q+ ++ ++  I  +   + T     +  NN  
Sbjct: 69  ALIGGATGMIGDPSFKATERTLNSAQTVQQWVDDLRQQITRTMTPHLTQPLRCV--NNAD 126

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDFVELAK 189
           W   +  ID  R+IG  FSVN M++ ESV+ RL R +Q +SF EF+Y +LQ++DF  L +
Sbjct: 127 WTGQVNVIDFFRDIGKHFSVNAMINRESVKQRLARPDQGISFTEFSYSLLQSFDFAHLNR 186

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
            + CRLQ+GG+DQWGNI+ GIDL  RL    +  LT PL+T + GTK GKT  GA+WL+ 
Sbjct: 187 EHQCRLQIGGNDQWGNIVSGIDLTRRLNNETVHGLTLPLITKSDGTKFGKTEGGAVWLDA 246

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM----AKLQGKEINEAKKIIATE 305
             TSPY F+Q+W N DDADV  F +  T L + EI  +    A   GK   +A++I+A  
Sbjct: 247 SKTSPYAFYQFWLNTDDADVYRFLRYYTFLSVDEIAHIEAEDAARSGKP--QAQQILAEN 304

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDE-------------VSRGMGL 352
           IT  VHG      A   +   F  ++         +S+DE             VS    +
Sbjct: 305 ITAFVHGEAGLASAQRISDALFSGAV-------TQLSRDELAQLELDGLPCTTVSTADDV 357

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
           + L++ +  A+S  +AR  L + AI++N   +++  L      FD
Sbjct: 358 VELLIASQLASSKRQAREWLANGAIRVNGEKMADADLSHSFALFD 402


>gi|229492662|ref|ZP_04386463.1| tyrosyl-tRNA synthetase [Rhodococcus erythropolis SK121]
 gi|229320321|gb|EEN86141.1| tyrosyl-tRNA synthetase [Rhodococcus erythropolis SK121]
          Length = 429

 Score =  264 bits (675), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 150/416 (36%), Positives = 227/416 (54%), Gaps = 15/416 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + L  L+ RG I Q ++   L      G VT Y G+D T  SLHAGHL  L+ L   Q+ 
Sbjct: 8   NILDELTWRGLIAQSTDLDALRKDLEAGPVTLYAGFDPTGPSLHAGHLVPLLALKRFQRA 67

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQE-IQENIEKIKGIFSSFIKYGTGKTDALM 125
           G++PI L GG T +IGDP  RD   R M S + + +   +I+G    F+ +    T A++
Sbjct: 68  GNRPIVLAGGATGLIGDP--RDVGERTMNSADTVADWAGRIRGQLERFVDFDDSPTSAVI 125

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
            NN  W   +  ID LR++G  FSVN ML+ ++V+ RL+ +  +S+ EF+YM+LQA D++
Sbjct: 126 ENNMNWTGKMSAIDFLRDVGKHFSVNVMLARDTVKRRLESD-GMSYTEFSYMLLQANDYL 184

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK-TLSGA 244
            L ++  C LQ+GGSDQWGNII G++L  R+    + A+T PL+T+A G K GK T  G+
Sbjct: 185 HLRRDLGCTLQVGGSDQWGNIIAGVELNRRVDGESVHAMTVPLVTSADGKKFGKSTGGGS 244

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKKII 302
           +WL+ EMTSPY ++QY+ N  DADV+ + +  T L   E+  +  A  +     EA+K +
Sbjct: 245 LWLDPEMTSPYAWYQYFVNTGDADVIKYLRWFTFLTADELAELETATAERPHAREAQKRL 304

Query: 303 ATEITTMVHGREEAEKAATAAMECF--------DMSIHSQHMPTISISKDEVSRGMGLLT 354
           A E+TT+VHG         A+   F        D S  +  +   S+S+        ++ 
Sbjct: 305 AAEMTTLVHGEHNTRAVELASQALFGKAELAELDESTLAAALKEASVSELAPGEPRTIID 364

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
           L+V +G   S   ARR +K     +NN  +S +  +    D      + +  GK+N
Sbjct: 365 LLVTSGLCESKGAARRAVKEGGASVNNQKVSADDWEPTASDLLHGSWLVVRRGKRN 420


>gi|333029513|ref|ZP_08457574.1| Tyrosyl-tRNA synthetase [Bacteroides coprosuis DSM 18011]
 gi|332740110|gb|EGJ70592.1| Tyrosyl-tRNA synthetase [Bacteroides coprosuis DSM 18011]
          Length = 430

 Score =  264 bits (675), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 150/428 (35%), Positives = 232/428 (54%), Gaps = 22/428 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG +H +    E   L ++  V+AY+G D TA SLH GHL  +M+L  LQ+ 
Sbjct: 2   NFVDELKWRGMVHDMMPGTEE--LLAKEQVSAYVGIDPTADSLHIGHLVSVMMLRHLQRC 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT-GKTDALM 125
           GHKP +L+GG T +IGDPS +   R ++    ++ N   IK   S F+ + +  +  A +
Sbjct: 60  GHKPFALIGGATGMIGDPSGKSLERNLLDDTTLRHNQAAIKKQLSKFLDFDSDAENKAEL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQAYD 183
           +NN  W+ +  ++D +R++G   +VN M++ +SV+ RL  E    LSF EF Y +LQAYD
Sbjct: 120 VNNYDWMKNFTFLDFVRDVGKHITVNYMMAKDSVKKRLTGEARDGLSFTEFTYQLLQAYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           ++ L ++   +LQMGGSDQWGNI  G +L  R    ++F LT PL+T A G K GKT SG
Sbjct: 180 YLHLLESRGVKLQMGGSDQWGNITTGAELIRRTNGQEVFGLTCPLITKADGGKFGKTESG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEA--KKI 301
            IWL++  TSPY F+Q+W N+ D D   + K  TTL    +  + +   K  +E   +K 
Sbjct: 240 NIWLDRRYTSPYKFYQFWLNVSDEDAARYIKIFTTLSQEVVTELTEEHSKAPHERILQKR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDEVS 347
           +A EIT MVH  E+ E A  A+   F  S                 + +P   I K  ++
Sbjct: 300 LAKEITVMVHSEEDYEAAVEASEILFGKSTSETLRKIDEDTLLSVFEGVPQFEIEKSLLN 359

Query: 348 RGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G   + L V  A    S  E R+ +K+N + +N   + + ++ I  ++  +   + +  
Sbjct: 360 DGTKAIDLFVDHAEIFPSKGELRKLIKNNGVSLNKEKLDDPEMLITDKELLNNKYLLVQR 419

Query: 407 GKKNHIIC 414
           GKKN+ + 
Sbjct: 420 GKKNYFLV 427


>gi|281490928|ref|YP_003352908.1| Tyrosyl-tRNA synthetase [Lactococcus lactis subsp. lactis KF147]
 gi|281374686|gb|ADA64206.1| Tyrosyl-tRNA synthetase [Lactococcus lactis subsp. lactis KF147]
          Length = 419

 Score =  264 bits (675), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 149/418 (35%), Positives = 233/418 (55%), Gaps = 22/418 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG + Q ++   L    ++ +V+ Y+GYD TA SLH G+L Q++ +  LQ  GHKP 
Sbjct: 7   LKARGLVFQTTDEAALSKALTEDMVSYYVGYDPTADSLHLGNLVQILTMKRLQMAGHKPY 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+D  R +     + +   KI+     F+ +  G+  A M NN  W
Sbjct: 67  ALVGGATGLIGDPSFKDSERSLQTKDTVTKWSGKIRSQLERFLDFENGENKAEMTNNYNW 126

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
             ++ +ID LR++G  F+VN M+S +SV+SR+  E  +S+ EF Y I+Q YDF EL + +
Sbjct: 127 FENLTFIDFLRDVGKHFTVNYMISKDSVKSRM--ESGISYTEFAYQIMQGYDFYELNQLH 184

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
           +  LQ+GGSDQWGN+  G +L  R    +   +T PL+T ++G K GK+   AIWL+ + 
Sbjct: 185 NVTLQLGGSDQWGNMTAGTELLRRKANKQGHVITIPLITDSTGKKFGKSEGNAIWLDADK 244

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATEITTM 309
           TSPY  +Q+W N+DDAD V   K  T L + EI  + +      +E  A+K++A E+ ++
Sbjct: 245 TSPYEMYQFWLNVDDADAVKMLKIFTFLSLEEIAEIEEQFEAARHERLAQKVLAREVVSL 304

Query: 310 VHGREEAEKAATAAMECF---DM------SIHS--QHMPTISISKDEVSRGMGLLTLIVK 358
           VHG+   E+A   +   F   D+      SI +  +  P   ++ DE    + L+ L++ 
Sbjct: 305 VHGKAAYEQAVKTSEILFGGGDLRQLDAKSILTGLKAAPQHQVTDDE---DLTLVELLIS 361

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN--IKLSFGKKNHIIC 414
           AG A S  +AR  + + AI IN   +  + L   + D D   N    +  GKK + + 
Sbjct: 362 AGIAPSKRQAREDITNGAIYINGERV--QALDYVITDSDKIENRLTVIRRGKKKNFVL 417


>gi|317124689|ref|YP_004098801.1| tyrosyl-tRNA synthetase [Intrasporangium calvum DSM 43043]
 gi|315588777|gb|ADU48074.1| tyrosyl-tRNA synthetase [Intrasporangium calvum DSM 43043]
          Length = 420

 Score =  264 bits (675), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 144/400 (36%), Positives = 224/400 (56%), Gaps = 12/400 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +D    L  RG + Q ++   L    ++G +T Y G+D TA SLH G+L QL++L   Q+
Sbjct: 2   TDIFDELQWRGLVAQSTDEAALREALAEGPLTLYCGFDPTAPSLHFGNLVQLVVLRRFQR 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQE-IQENIEKIKGIFSSFIKYGTGKTDAL 124
            GH  I L+GG T +IGDP  R  S R+++++E    N+ +IK +   F+ +  G   A+
Sbjct: 62  AGHHVICLVGGSTGLIGDP--RPTSERVLKTKEQTASNVARIKALVQPFLDF-DGANAAI 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           +++N  W  S+  +D LR++G  F VN+M+  E++ +RL+ ++ +S+ EF+Y +LQA DF
Sbjct: 119 LVDNLDWTASLTALDFLRDVGKHFRVNQMVKKEAISARLESQEGISYTEFSYQLLQALDF 178

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L + Y C LQ GGSDQWGN+  G+DL  R +   +   T+PLL  + GTK GK+   A
Sbjct: 179 RHLYRTYGCTLQTGGSDQWGNLTAGVDLIHRSEGASVHCFTTPLLVDSGGTKFGKSEGNA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKII 302
           +WL+ +MTSPY+F+QY+ NI+DA VVS  K  T L   EI  + +   +E     A+K +
Sbjct: 239 VWLSADMTSPYSFYQYFLNIEDASVVSMLKVFTDLGQDEIAELERQVKEEPFRRAAQKAL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMS-IHSQHMPTISISKDE-----VSRGMGLLTLI 356
           A +ITT+VHG +       A+   F    +H     T++ +  E     +  G   +  +
Sbjct: 299 AGDITTLVHGADATAAVQAASEALFGKGELHGLDASTLTDATAELPGARIEVGTSFVDAL 358

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
           V AG   S N ARR +      +NN  +S+    +   DF
Sbjct: 359 VAAGLVDSRNAARRAIADGGASLNNVKVSDPDRILGDDDF 398


>gi|60679675|ref|YP_209819.1| putative tyrosyl-tRNA synthetase 1 [Bacteroides fragilis NCTC 9343]
 gi|81317251|sp|Q5LJ19|SYY_BACFN RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|60491109|emb|CAH05857.1| putative tyrosyl-tRNA synthetase 1 [Bacteroides fragilis NCTC 9343]
          Length = 430

 Score =  264 bits (675), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 154/431 (35%), Positives = 229/431 (53%), Gaps = 30/431 (6%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG +H +    E   L ++  VTAY+G D TA SLH GHL  +M+L   Q+ 
Sbjct: 2   NFVEELRWRGMVHDMMPGTEE--LLAKEQVTAYVGIDPTADSLHIGHLCGVMILRHFQRC 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD-ALM 125
           GHKP++L+GG T +IGDPS +   R ++  + ++ N   IK   + F+ + +   + A +
Sbjct: 60  GHKPLALIGGATGMIGDPSGKSAERNLLDEETLRHNQACIKKQLAKFLDFESDAPNRAEL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQAYD 183
           +NN  W+    ++D  RE+G   +VN M++ ESV+ RL  E    LSF EF Y +LQ YD
Sbjct: 120 VNNYDWMKEFTFLDFAREVGKHITVNYMMAKESVKKRLNGEARDGLSFTEFTYQLLQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ L +   C+LQMGGSDQWGNI  G +L  R    + +ALT PL+T A G K GKT SG
Sbjct: 180 FLHLYETKGCKLQMGGSDQWGNITTGTELIRRTNGGEAYALTCPLITKADGGKFGKTESG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEA----- 298
            IWL+   TSPY F+Q+W N+ DAD   + K  T+L  +EID +      E NEA     
Sbjct: 240 NIWLDPRYTSPYKFYQFWLNVSDADAERYIKIFTSLDKAEIDGLI----AEHNEAPHLRV 295

Query: 299 -KKIIATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISK 343
            +K +A E+T MVH  E+   A  A+   F  +                 + +P   IS+
Sbjct: 296 LQKRLAKEVTVMVHSEEDYNAAVDASNILFGNATSDALKKLDEDTLLAVFEGVPQFEISR 355

Query: 344 DEVSRGMGLLTLIV-KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNI 402
           D ++ G+  + L V  A    S  E R+ ++   + +N   ++     I   D      +
Sbjct: 356 DALAEGVKAVDLFVDNAAVFASKGEMRKLVQGGGVSLNKEKLAAFDQVITTADLLDEKYL 415

Query: 403 KLSFGKKNHII 413
            +  GKKN+ +
Sbjct: 416 LVQRGKKNYYL 426


>gi|295839656|ref|ZP_06826589.1| tyrosine-tRNA ligase [Streptomyces sp. SPB74]
 gi|197698497|gb|EDY45430.1| tyrosine-tRNA ligase [Streptomyces sp. SPB74]
          Length = 422

 Score =  264 bits (675), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 145/422 (34%), Positives = 233/422 (55%), Gaps = 11/422 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +D +  L  RG   Q ++   L    + G VT Y G+D TA+SLH GHL Q++ +  LQ+
Sbjct: 2   TDIVDDLKWRGLFAQSTDEEALRKALANGPVTFYCGFDPTAASLHVGHLVQVLTVRRLQQ 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+P++L+GG T  IGDP    E R +     I + +++++     F+ +  G + A M
Sbjct: 62  AGHRPLALVGGATGQIGDPRPTAE-RTLNDPATIAQWVDRLRAQIEPFLDF-EGPSAARM 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  W   +  I  LR++G  F VN+ML+ ESV  RL+ EQ +S+ EF+Y +LQA DF+
Sbjct: 120 VNNLDWTSGLSAIAFLRDVGKHFRVNKMLTKESVARRLESEQGISYTEFSYQLLQAMDFL 179

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLF-ALTSPLLTTASGTKMGKTLSGA 244
           EL + + C LQ GGSDQWGN+  G+DL  R++   +  AL +PL+T A GTK GKT  GA
Sbjct: 180 ELYRRHGCVLQQGGSDQWGNLTAGVDLIHRVEPDAVVHALATPLMTKADGTKFGKTEGGA 239

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE--INEAKKII 302
           +WL+  MT+PY F+Q+W N+DD D+  + + L+    +E++++  +  +      A++ +
Sbjct: 240 VWLDPSMTTPYAFYQFWLNVDDRDISRYTRILSFRSRAELEKLEAVTAERPQARAAQRAL 299

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMS-IHSQHMPTISISKDEVSRG-----MGLLTLI 356
           A E+TT+VHG  +      A+   F    +      T++ +  E+ R      + ++ L+
Sbjct: 300 AEELTTLVHGEAQTRAVVAASRALFGQGELAGLDGATLAAALGELPRAVVAEPVSVVDLL 359

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V+ G   S + ARR +K     +NN  ++ E       +      + L  GKKN     +
Sbjct: 360 VETGLVASKSAARRTIKEGGAYVNNVKVAGEDAVPAADELLHGRWLVLRRGKKNLAAVEI 419

Query: 417 CG 418
            G
Sbjct: 420 TG 421


>gi|212692526|ref|ZP_03300654.1| hypothetical protein BACDOR_02022 [Bacteroides dorei DSM 17855]
 gi|237709152|ref|ZP_04539633.1| tyrosyl-tRNA synthetase [Bacteroides sp. 9_1_42FAA]
 gi|265752681|ref|ZP_06088250.1| tyrosyl-tRNA synthetase [Bacteroides sp. 3_1_33FAA]
 gi|212664937|gb|EEB25509.1| hypothetical protein BACDOR_02022 [Bacteroides dorei DSM 17855]
 gi|229456848|gb|EEO62569.1| tyrosyl-tRNA synthetase [Bacteroides sp. 9_1_42FAA]
 gi|263235867|gb|EEZ21362.1| tyrosyl-tRNA synthetase [Bacteroides sp. 3_1_33FAA]
          Length = 430

 Score =  264 bits (675), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 148/428 (34%), Positives = 230/428 (53%), Gaps = 22/428 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L+ RG +H +  P   ++L  + V TAY+G D TA SLH GHL  +M+L   Q+ 
Sbjct: 2   NFVEELTWRGMVHTMM-PGTEELLAKEQV-TAYLGIDPTADSLHIGHLCGVMMLRHFQRC 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD-ALM 125
           GHKP++L+GG T +IGDPS + + R ++  + ++ N+  IK   + F+ + +   + A +
Sbjct: 60  GHKPLALVGGATGMIGDPSGKSQERNLLTEETLRHNVACIKKQLAKFLDFESDAPNKAEL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQAYD 183
           +NN  W+    ++D  REIG   +VN M++ +SV+ RL  E    LSF EF Y +LQ YD
Sbjct: 120 VNNYDWMKDFTFLDFAREIGKHITVNYMMAKDSVQKRLNGEARDGLSFTEFTYQLLQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ L +   C+LQMGGSDQWGNI  G +L  R    ++FALT PL+T A G K GKT SG
Sbjct: 180 FLHLYETKGCKLQMGGSDQWGNITTGAELIRRTNGGEVFALTCPLITKADGGKFGKTESG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA--KLQGKEINEAKKI 301
            IWL+   TSPY F+Q+W N+ D D   + K  T+L   E++ +     +   +   +K 
Sbjct: 240 NIWLDPRYTSPYKFYQFWLNVSDEDAARYIKIFTSLSQEEVEVLTAEHAEAPHLRVLQKR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDEVS 347
           +A E+T MVH  E+   A  A+   F  +                 + +P   +SKD ++
Sbjct: 300 LAKEVTVMVHSEEDYNAAVEASGILFGNATSEALKKLDEDTLLAVFEGVPQFEVSKDVLA 359

Query: 348 RGMGLLTLIV-KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+  + L V  A    S  E R+ ++   + +N   ++     I   D      + +  
Sbjct: 360 EGVKAVDLFVDNAAVFASKGEMRKLVQGGGVSLNKEKLNAFDQVITTADLLDGKYLLVQR 419

Query: 407 GKKNHIIC 414
           GKKN+ + 
Sbjct: 420 GKKNYYLV 427


>gi|240170136|ref|ZP_04748795.1| tyrosyl-tRNA synthetase [Mycobacterium kansasii ATCC 12478]
          Length = 425

 Score =  264 bits (674), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 157/423 (37%), Positives = 240/423 (56%), Gaps = 28/423 (6%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L+ RG I Q ++   L     +G +T Y G+D TA+SLHAGHL  L+ L   Q+ G
Sbjct: 2   ILDELAWRGLIAQSTDLDALAAELRRGPMTLYAGFDPTAASLHAGHLVPLLTLRRFQRAG 61

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQE-IQENIEKIKGIFSSFIKY---GTGKTDA 123
           H+PI L GG T +IGDP  RD   R +   + + E  E+I+G    F+ +   G   T A
Sbjct: 62  HRPIVLAGGATGMIGDP--RDVGERTLNDVDTVAEWTERIRGQLERFVDFSDSGDSPTGA 119

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           ++ NN  W  ++  I+ LR++G  FSVN ML  ++VR RL+ E  +S+ EF+YM+LQA D
Sbjct: 120 IVENNIEWTSAMSAIEFLRDVGKHFSVNVMLDRDTVRRRLEGE-GISYTEFSYMLLQAND 178

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK-TLS 242
           +VEL + + C LQ+GGSDQWGNII G+ L  +     + ALT PL+T A GTK GK T  
Sbjct: 179 YVELHRRHGCALQIGGSDQWGNIIAGVRLVRQKLGATVHALTVPLVTAADGTKFGKSTGG 238

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKK 300
           G++WL+ ++TSPY ++QY+ N  DADV+ + +  T L   E+  +  A  +  +   A++
Sbjct: 239 GSLWLDPQLTSPYAWYQYFVNTSDADVIRYLRWFTFLSAEELAELEQATAERPQQRAAQR 298

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSI--HSQ----HMPTISISKDEVSRGM---- 350
            +A E+T++VHG     +AATAA+E    ++  H++      PT++ +  E +       
Sbjct: 299 RLAAELTSLVHG-----EAATAAVEHASRALFGHAELSRLDEPTLAAALRETTVAELKPG 353

Query: 351 ---GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFG 407
              G++ L+V  G A S   ARR +    + +NN  +  ++   +  DF     + L  G
Sbjct: 354 SPDGIVDLLVATGLADSRKAARRTINEGGVSVNNIRVETDEWTPQGMDFLHGRWLVLRRG 413

Query: 408 KKN 410
           K+N
Sbjct: 414 KRN 416


>gi|167997721|ref|XP_001751567.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162697548|gb|EDQ83884.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 502

 Score =  264 bits (674), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 155/425 (36%), Positives = 231/425 (54%), Gaps = 18/425 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + + +L ERG I  +++  EL   C +  +  Y G+D TA SLH G+L  +++L W Q+ 
Sbjct: 79  NVVEVLEERGLIESVTS-EELKATCMKQRLKVYCGFDPTAESLHLGNLLGIIVLSWFQRC 137

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD-ALM 125
           GH P++L+GG T  IGDPS + + R  +    +  N+  I+ I S+ +K  + + +  ++
Sbjct: 138 GHIPVALIGGATGRIGDPSGKSKERPALDDDTLVRNVNGIRKILSNILKGNSDEDEKVVV 197

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           LNN  WL  I  +D L+++G +  V  M++ ESV++RL  E  +S+ EF Y +LQ YDFV
Sbjct: 198 LNNYDWLKEISLLDFLKDVGKYARVGTMMAKESVKARLNSEDGMSYTEFTYQLLQGYDFV 257

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGER-LKTPKLFALTSPLLTTASGTKMGKTLSGA 244
            L +     +Q+GGSDQWGNI  G DL  R L+    + LT PLL  + GTK GK+ SGA
Sbjct: 258 HLFREEGISVQIGGSDQWGNITAGTDLVRRLLQQEGAYGLTFPLLLKSDGTKFGKSESGA 317

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKI 301
           IWL     SPYNF+Q+     DADV+ F KRLT + + EI+ +    K  G   N  +K 
Sbjct: 318 IWLAPSSLSPYNFYQHLFATPDADVIKFMKRLTFVDIKEIEALEASMKQPGYAPNSVQKR 377

Query: 302 IATEITTMVHGRE---EAEKAATAAMECFDMSIHSQHM-------PTISISKDEVSRGMG 351
           +A E+T  VHG +   EA KA  A       ++ SQ +       P+ SIS   V  G  
Sbjct: 378 LAEEVTRFVHGEQGLTEALKATQALAPGAAAALDSQTLEAIAQDVPSCSISYSVV--GKP 435

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           L+ + V  G   S    RR +K   + +NN  + +E   +  +D        LS GKKN 
Sbjct: 436 LVDVSVSTGLLQSKAAVRRLIKQGGLYLNNVKVEDEGKTMVAEDIIDDKIFLLSAGKKNR 495

Query: 412 IICHL 416
           ++  +
Sbjct: 496 LVVRV 500


>gi|226360087|ref|YP_002777865.1| tyrosyl-tRNA synthetase [Rhodococcus opacus B4]
 gi|226238572|dbj|BAH48920.1| tyrosyl-tRNA synthetase [Rhodococcus opacus B4]
          Length = 425

 Score =  264 bits (674), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 150/411 (36%), Positives = 227/411 (55%), Gaps = 15/411 (3%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L+ RG I Q ++   L      G VT Y G+D T  SLHAGHL  L+ L   Q+ G++PI
Sbjct: 9   LTWRGLIAQSTDLDALRRDLDAGPVTLYAGFDPTGPSLHAGHLVPLLALKRFQRAGNRPI 68

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQE-IQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
            L GG T +IGDP  RD   R M S + + E  ++I+G    F+ +    + A++ NN  
Sbjct: 69  VLAGGATGLIGDP--RDVGERTMNSADTVAEWADRIRGQLERFVDFDDSPSGAVIENNMN 126

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           W   +  ID LR++G  FSVN ML+ ++V+ RL+ +  +S+ EF+YM+LQA D++ L ++
Sbjct: 127 WTGKLSAIDFLRDVGKHFSVNVMLARDTVKRRLETD-GMSYTEFSYMLLQANDYLHLRRS 185

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK-TLSGAIWLNK 249
           + C LQ+GGSDQWGNII G++L  R+    +  LT PL+T+A G K GK T  G++WL+ 
Sbjct: 186 HGCSLQVGGSDQWGNIIAGVELNRRVDAASVHGLTVPLVTSADGKKFGKSTGGGSLWLDP 245

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKKIIATEIT 307
           EMTSPY ++QY+ N  DADV+ + +  T L   E+  +  A  +     EA++ +A E+T
Sbjct: 246 EMTSPYAWYQYFVNTGDADVIKYLRWFTFLSAEELAELETATAERPHAREAQRRLAAEMT 305

Query: 308 TMVHGREEAEKAATAAMECFDMS-IHSQHMPTISISKDEVS-------RGMGLLTLIVKA 359
           T+VHG         A+   F  + +     PT+  +  E S           ++ L+V +
Sbjct: 306 TLVHGEANTRAVELASQALFGRAELQDLDEPTLGAALREASVAELAPGEPSSIVDLLVLS 365

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
           G   S   ARR +K     +NN  IS+E    +  D      + +  GK+N
Sbjct: 366 GLCESKGAARRAVKEGGASVNNQKISSEDWTPESGDLLHGTWLVVRRGKRN 416


>gi|86157471|ref|YP_464256.1| tyrosyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-C]
 gi|97197467|sp|Q2IPT7|SYY_ANADE RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|85773982|gb|ABC80819.1| tyrosyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 420

 Score =  264 bits (674), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 152/423 (35%), Positives = 232/423 (54%), Gaps = 19/423 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + L  L  R  +H    P  L    +QG +T Y+G+D TA SLH GHL  +M L WLQ+ 
Sbjct: 3   NLLEALVPRSLVHD-QTP-GLQARLAQGPITGYVGFDPTADSLHVGHLLAVMSLAWLQRC 60

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           G  PI ++GGGT ++GDPS +   R ++  +EI  N+  I+     F+ +  G+  A + 
Sbjct: 61  GGTPIIVVGGGTGMVGDPSGKRSERPVLSVEEIDRNVAAIRAQLERFVSF-EGQNAARVR 119

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL SI  ++ LR++G  F+VN ML+ +SV+ R+  E  +SF EF+Y ++QAYDF  
Sbjct: 120 NNADWLRSIGLMEFLRDVGKHFTVNYMLAKDSVKGRM--ESGISFTEFSYQLIQAYDFWH 177

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L     C LQMGGSDQWGNI  G +L  R     +  LT PLLTTASGTK GKT  GA+W
Sbjct: 178 LFHAERCELQMGGSDQWGNITAGAELVSRKDGASVHGLTFPLLTTASGTKFGKTEGGAVW 237

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIAT 304
           L+   TSPY F+Q+W N DD DV    K  T L + EI  +   Q ++  +  A++ +A 
Sbjct: 238 LDPARTSPYKFFQFWLNTDDRDVERLLKFFTFLSLDEIAALLAEQARDPGKRPAQRRLAE 297

Query: 305 EITTMVHGREEAEKAATAAMECFD-----------MSIHSQHMPTISISKDEVSRGMGLL 353
           ++T  VHG +       A+   F            + + +  +P+ +++ DE++  + + 
Sbjct: 298 DVTARVHGPDVTRSVIEASRILFGGTDLRAAGVDVLDVLAGEIPSATVTGDELA-ALTVA 356

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            L+VK G A S  E RR +      +N +++ +   ++   +  + G   L  GK+N+ +
Sbjct: 357 DLLVKVGLAASKGEVRRGVAGRGFSLNGAVLESGDAKVAAGELLAGGYALLQKGKRNYAL 416

Query: 414 CHL 416
             +
Sbjct: 417 VKV 419


>gi|125623269|ref|YP_001031752.1| tyrosyl-tRNA synthetase [Lactococcus lactis subsp. cremoris MG1363]
 gi|189083658|sp|A2RIB1|SYY_LACLM RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|124492077|emb|CAL97006.1| Tyrosine-tRNA ligase [Lactococcus lactis subsp. cremoris MG1363]
 gi|300070019|gb|ADJ59419.1| tyrosyl-tRNA synthetase [Lactococcus lactis subsp. cremoris NZ9000]
          Length = 419

 Score =  264 bits (674), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 150/418 (35%), Positives = 233/418 (55%), Gaps = 22/418 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG + Q ++   L    ++ +V+ Y+GYD TA SLH G+L  ++ +  LQ  GHKP 
Sbjct: 7   LKARGLVFQTTDEAALSKALTEDMVSYYVGYDPTADSLHLGNLVLILTMKRLQMAGHKPY 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+D  R +     + +   KI+     F+ +  G+  A M NN  W
Sbjct: 67  ALVGGATGLIGDPSFKDSERSLQTKDTVTKWSGKIRSQLERFLDFENGENKAEMTNNYNW 126

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
             ++ +ID LR++G  F+VN M+S +SV+SR+  E  +S+ EF Y I+Q YDF EL + +
Sbjct: 127 FENLTFIDFLRDVGKHFTVNYMISKDSVKSRM--ESGISYTEFAYQIMQGYDFYELNQLH 184

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
           +  LQ+GGSDQWGN+  G +L  R    +   +T PL+T ++G K GK+   AIWL+ + 
Sbjct: 185 NVTLQLGGSDQWGNMTAGTELLRRKANKQGHVITIPLITDSTGKKFGKSEGNAIWLDADK 244

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATEITTM 309
           TSPY  +Q+W N+DDAD V   K  T L + EI  + +      +E  A+K++A E+ ++
Sbjct: 245 TSPYEMYQFWLNVDDADAVKMLKIFTFLSLEEIAEIEEQFEAARHERLAQKVLAREVVSL 304

Query: 310 VHGREEAEKAATAAMECF---DM------SIHS--QHMPTISISKDEVSRGMGLLTLIVK 358
           VHG+E  E+A   +   F   D+      SI +  +  P   I+ DE    + L+ L++ 
Sbjct: 305 VHGKEAYEQAVKTSEILFGGGDLRQLDAKSILTGLKAAPQHQIAPDE---DLTLIELLIS 361

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN--IKLSFGKKNHIIC 414
            G A S  +AR  + + AI IN   +  ++L   L D D   N    +  GKK + + 
Sbjct: 362 VGIAPSKRQAREDITNGAIYINGERV--QELDYVLTDSDKIENRLTVIRRGKKKNFVL 417


>gi|53711359|ref|YP_097351.1| tyrosyl-tRNA synthetase [Bacteroides fragilis YCH46]
 gi|265764804|ref|ZP_06093079.1| tyrosyl-tRNA synthetase [Bacteroides sp. 2_1_16]
 gi|81384005|sp|Q650K7|SYY_BACFR RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|52214224|dbj|BAD46817.1| tyrosyl-tRNA synthetase [Bacteroides fragilis YCH46]
 gi|263254188|gb|EEZ25622.1| tyrosyl-tRNA synthetase [Bacteroides sp. 2_1_16]
          Length = 430

 Score =  264 bits (674), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 154/431 (35%), Positives = 228/431 (52%), Gaps = 30/431 (6%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG +H +    E   L ++  VTAY+G D TA SLH GHL  +M+L   Q+ 
Sbjct: 2   NFVEELRWRGMVHDMMPGTEE--LLAKEQVTAYVGIDPTADSLHIGHLCGVMILRHFQRC 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD-ALM 125
           GHKP++L+GG T +IGDPS +   R ++  + ++ N   IK   + F+ + +   + A +
Sbjct: 60  GHKPLALIGGATGMIGDPSGKSAERNLLDEETLRHNQACIKKQLAKFLDFESDAPNRAEL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQAYD 183
           +NN  W+    ++D  RE+G   +VN M++ ESV+ RL  E    LSF EF Y +LQ YD
Sbjct: 120 VNNYDWMKEFTFLDFAREVGKHITVNYMMAKESVKKRLNGEARDGLSFTEFTYQLLQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ L +   C+LQMGGSDQWGNI  G +L  R    + +ALT PL+T A G K GKT SG
Sbjct: 180 FLHLYETKGCKLQMGGSDQWGNITTGTELIRRTNGGEAYALTCPLITKADGGKFGKTESG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEA----- 298
            IWL+   TSPY F+Q+W N+ DAD   + K  T+L  +EID +      E NEA     
Sbjct: 240 NIWLDPRYTSPYKFYQFWLNVSDADAERYIKIFTSLDKAEIDGLV----AEHNEAPHLRV 295

Query: 299 -KKIIATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISK 343
            +K +A E+T MVH  E+   A  A+   F  +                 + +P   IS+
Sbjct: 296 LQKRLAKEVTVMVHSEEDYNAAVDASNILFGNATSDALKKLDEDTLLAVFEGVPQFEISR 355

Query: 344 DEVSRGMGLLTLIV-KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNI 402
           D +  G+  + L V  A    S  E R+ ++   + +N   ++     I   D      +
Sbjct: 356 DALVEGVKAVDLFVDNAAVFASKGEMRKLVQGGGVSLNKEKLAAFDQVITTADLLDEKYL 415

Query: 403 KLSFGKKNHII 413
            +  GKKN+ +
Sbjct: 416 LVQRGKKNYYL 426


>gi|297832898|ref|XP_002884331.1| tRNA synthetase class I family protein [Arabidopsis lyrata subsp.
           lyrata]
 gi|297330171|gb|EFH60590.1| tRNA synthetase class I family protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 511

 Score =  263 bits (673), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 160/435 (36%), Positives = 237/435 (54%), Gaps = 29/435 (6%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVT---AYIGYDLTASSLHAGHLTQLMLLF 61
           + + + IL ERG +  I++   L   CS   V     Y G+D TA SLH G+L  +++L 
Sbjct: 82  RPNVVDILEERGLLESITS-ENLRSACSDPKVAPLRVYCGFDPTAESLHLGNLLGIIVLS 140

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKT 121
           W Q+ GH+ + L+GG T  +GDPS +   R  + +  +++NI  IK I    IK   G  
Sbjct: 141 WFQRCGHQAVGLIGGATGRVGDPSGKSLERPELDADTLEKNIAGIKRII---IKILGGNP 197

Query: 122 DA----LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYM 177
            +    ++ NN  W   +  +D L ++G F  V  M++ ESV+ RL+ EQ +S+ EF Y 
Sbjct: 198 SSGGSYVIFNNYDWWKDMTMLDFLNKVGRFARVGTMMAKESVKKRLESEQGMSYTEFTYQ 257

Query: 178 ILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL--KTPKLFALTSPLLTTASGT 235
           +LQAYDF+ L KN    +Q+GGSDQWGNI  G DL  ++       + LT PLL    GT
Sbjct: 258 LLQAYDFLHLFKNEGINVQIGGSDQWGNITAGTDLIRKILQAEEAAYGLTFPLLLKNDGT 317

Query: 236 KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI----DRMAKLQ 291
           K GK+  GAIWL+  M SPY F+QY+ ++ D DV+ F K LT L + EI    D+M+K  
Sbjct: 318 KFGKSEDGAIWLSPSMLSPYKFYQYFFSVPDVDVIRFLKTLTFLSLDEIKILEDQMSK-P 376

Query: 292 GKEINEAKKIIATEITTMVHGRE---EAEKAATAAMECFDMSIH-------SQHMPTISI 341
           G   N A+  +A E+T  VHG E   EA KA  A     +  +        ++ +P+ S+
Sbjct: 377 GYVPNTAQIKLAEEVTRFVHGEEGLKEAIKATEALRPGAETKLDWNLIERIAEDIPSCSL 436

Query: 342 SKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
             D VS G+ ++ L V AG   S + ARR LK     +NN  + +E  +++ +D      
Sbjct: 437 PIDRVS-GLSIVDLSVSAGLFESKSAARRMLKQGGFYMNNERVDDENKRVEEEDIVEGKG 495

Query: 402 IKLSFGKKNHIICHL 416
           + LS GKKN ++  +
Sbjct: 496 LVLSAGKKNKVVVRI 510


>gi|255010298|ref|ZP_05282424.1| tyrosyl-tRNA synthetase [Bacteroides fragilis 3_1_12]
 gi|313148097|ref|ZP_07810290.1| tyrosyl-tRNA synthetase [Bacteroides fragilis 3_1_12]
 gi|313136864|gb|EFR54224.1| tyrosyl-tRNA synthetase [Bacteroides fragilis 3_1_12]
          Length = 430

 Score =  263 bits (673), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 153/431 (35%), Positives = 230/431 (53%), Gaps = 30/431 (6%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG +H +    E   L ++  VTAY+G D TA SLH GHL  +M+L   Q+ 
Sbjct: 2   NFVEELRWRGMVHDMMPGTEE--LLAKEQVTAYLGIDPTADSLHIGHLCGVMILRHFQRC 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD-ALM 125
           GHKP++L+GG T +IGDPS +   R ++  + ++ N   IK   + F+ + +   + A +
Sbjct: 60  GHKPLALIGGATGMIGDPSGKSAERNLLDEETLRHNQACIKKQLAKFLDFESDVPNRAEL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQAYD 183
           +NN  W+    ++D +RE+G   +VN M++ ESV+ RL  E    LSF EF Y +LQ YD
Sbjct: 120 VNNYDWMKEFSFLDFVREVGKHITVNYMMAKESVKKRLNGEARDGLSFTEFTYQLLQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ L +   C+LQMGGSDQWGNI  G +L  R    + +ALT PL+T A G K GKT SG
Sbjct: 180 FLHLYETKGCKLQMGGSDQWGNITTGTELIRRTNGGEAYALTCPLITKADGGKFGKTESG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEA----- 298
            IWL+   TSPY F+Q+W N+ D+D   + K  T+L  +EID +      E NEA     
Sbjct: 240 NIWLDPRYTSPYKFYQFWLNVSDSDAERYIKIFTSLDKAEIDGLV----AEHNEAPHLRA 295

Query: 299 -KKIIATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISK 343
            +K +A E+T MVH  E+   A  A+   F  +                 + +P   IS+
Sbjct: 296 LQKRLAKEVTVMVHSEEDYNAAVDASNILFGNATSDALRKLDEDTLLAVFEGVPQFEISR 355

Query: 344 DEVSRGMGLLTLIV-KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNI 402
           D ++ G+  + L V  A    S  E R+ ++   + +N   ++     I   D      +
Sbjct: 356 DALTEGVKAVDLFVDNAAVFASKGEMRKLVQGGGVSLNKEKLAAFDQVITTADLLDEKYL 415

Query: 403 KLSFGKKNHII 413
            +  GKKN+ +
Sbjct: 416 LVQRGKKNYYL 426


>gi|189460189|ref|ZP_03008974.1| hypothetical protein BACCOP_00826 [Bacteroides coprocola DSM 17136]
 gi|189433050|gb|EDV02035.1| hypothetical protein BACCOP_00826 [Bacteroides coprocola DSM 17136]
          Length = 430

 Score =  263 bits (673), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 148/427 (34%), Positives = 227/427 (53%), Gaps = 22/427 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG +H +    E   L  + +VTAY+G D TA SLH GHL  +M+L   Q+ 
Sbjct: 2   NFVEELRWRGMVHTMMPGTEE--LLEKEMVTAYLGIDPTADSLHIGHLCGVMMLRHFQRC 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD-ALM 125
           GHKP++L+GG T +IGDPS + + R ++  + ++ N E IK     F+ + +   + A +
Sbjct: 60  GHKPLALVGGATGMIGDPSGKSQERNLLDEETLRHNQECIKKQLGKFLDFESDAPNRAEL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQAYD 183
           +NN  W+    ++D  R +G   +VN M++ +SV+ RL  E    LSF EF Y +LQ YD
Sbjct: 120 VNNYDWMKDFSFLDFARTVGKHITVNYMMAKDSVQKRLNGEARDGLSFTEFTYQLLQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ L +  +C+LQ+GGSDQWGNI  G +L  R    ++FALT PL+T A G K GKT SG
Sbjct: 180 FLHLYETKNCKLQLGGSDQWGNITTGAELIRRTNGGEVFALTCPLITKADGGKFGKTESG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKKI 301
            IWL+   TSPY F+Q+W N+ D D   + K  T+LP  EID +         +   +K 
Sbjct: 240 NIWLDPRYTSPYKFYQFWLNVSDEDAKRYIKIFTSLPKEEIDALIAEHEPAPHLRVLQKR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDEVS 347
           +A E+T MVH   + E A  A+   F  +                 + +P   +SK ++ 
Sbjct: 300 LAKEVTIMVHSEADYEAAVEASGILFGNATSEALKKLDEDTLLSVFEGVPQFEVSKTDIE 359

Query: 348 RGMGLLTLIV-KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+  + L   KA    S  E R+ ++   + +N   ++    +I   D      + +  
Sbjct: 360 AGIKAVDLFTEKAAVFASKGEMRKLVQGGGVSLNKEKLTAFDQEITTADLLDEKYLLVQR 419

Query: 407 GKKNHII 413
           GKKN+ +
Sbjct: 420 GKKNYYL 426


>gi|239637948|ref|ZP_04678909.1| tyrosyl-tRNA synthetase [Staphylococcus warneri L37603]
 gi|239596511|gb|EEQ79047.1| tyrosyl-tRNA synthetase [Staphylococcus warneri L37603]
          Length = 420

 Score =  263 bits (673), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 140/379 (36%), Positives = 216/379 (56%), Gaps = 20/379 (5%)

Query: 15  RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLM 74
           RG I+Q ++   ++ L ++  VT Y G D TA SLH GHL   + L   Q+ GH+PI L+
Sbjct: 12  RGLIYQQTDEAGIEELLNKEQVTLYCGADPTADSLHIGHLLPFLTLRRFQEHGHRPIVLI 71

Query: 75  GGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCS 134
           GGGT +IGDPS + E R +   ++++ N++ I        ++GT K  A+++NN+ WL  
Sbjct: 72  GGGTGMIGDPSGKSEERVLQTEEQVEANVQGISNQMHKLFEFGTDKG-AVLVNNKDWLGQ 130

Query: 135 IKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCR 194
           I  I  LR+ G    VN ML  +S+++RL  E  +S+ EF Y ILQA DF  L +  +C+
Sbjct: 131 ISLISFLRDYGKHVGVNYMLGKDSIQTRL--EHGISYTEFTYTILQAIDFGHLNRELNCK 188

Query: 195 LQMGGSDQWGNIICGIDLGERL-KTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTS 253
           +Q+GGSDQWGNI  GI+L  R+    + + LT PL+T + G K GK+ SGA+WL+ + TS
Sbjct: 189 IQVGGSDQWGNITSGIELMRRMYGQTEAYGLTIPLVTKSDGKKFGKSESGAVWLDADKTS 248

Query: 254 PYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKKIIATEITTMVH 311
           PY F+Q+W N  D DV+ F K  T L   EID++  +K +     EA+K +A  +T  +H
Sbjct: 249 PYEFYQFWINQSDEDVIKFLKYFTFLSKEEIDQLEQSKEEAPHKREAQKALAENVTRFIH 308

Query: 312 GREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIVKAGF 361
           G +    A   +   F   + S          + +P + +SKD  +    ++  +++ G 
Sbjct: 309 GEDALNDAIRISQALFSGDLKSLSAKELKEGFKDVPQVELSKDTTN----IIDALIETGI 364

Query: 362 ATSTNEARRHLKSNAIKIN 380
            +S  +AR  + + AI IN
Sbjct: 365 GSSKRQAREDVNNGAIYIN 383


>gi|16800707|ref|NP_470975.1| tyrosyl-tRNA synthetase [Listeria innocua Clip11262]
 gi|81526868|sp|Q92BB1|SYY_LISIN RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|16414126|emb|CAC96870.1| tyrosyl-tRNA synthetase [Listeria innocua Clip11262]
          Length = 419

 Score =  263 bits (673), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 158/417 (37%), Positives = 221/417 (52%), Gaps = 21/417 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I+Q ++   L     +  ++ Y G D +  S+H GHL   M+L   Q  GH+PI
Sbjct: 7   LEWRGAIYQQTDEEGLRKWVEEKQISLYCGIDPSGDSMHIGHLIPFMILRRFQNAGHRPI 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+GG T  IGDPS + E R++   ++I +N+E ++        +  G + A M+NN  W
Sbjct: 67  ILVGGATGTIGDPSGKKEERKLQSMEQISKNVESLRVQLGKIFDF-EGDSAASMVNNYDW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
              +  +D LR+ G  F+VN MLS + V SRL  E  +SF EF Y ILQA DF  L +  
Sbjct: 126 TKDVSILDFLRDYGKEFNVNTMLSKDIVASRL--EVGISFTEFAYQILQAMDFNHLYEFN 183

Query: 192 DCRLQMGGSDQWGNIICGIDL--GERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
           DCRLQ+GGSDQWGNI  G+DL   ++ +  K F LT PLLT A GTK GK+  GAIWLN 
Sbjct: 184 DCRLQIGGSDQWGNITAGLDLIRKKQGENAKAFGLTIPLLTKADGTKFGKSEGGAIWLNP 243

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE--INEAKKIIATEIT 307
           E T+PY F+Q+W N DD DVV + K  T L  +EID +AK   +E  +  A+K +A E+T
Sbjct: 244 EKTTPYEFYQFWINTDDRDVVKYLKYFTFLTEAEIDELAKQVEEEPHLRAAQKTLAAEMT 303

Query: 308 TMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIV 357
             VH  E  E+A   +   F   + +          + +PT      EV+    L+  +V
Sbjct: 304 KFVHSEEALEQALKISKALFSGDVTALTADEIEQGFKDVPTFVAEDAEVN----LVDWLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
             G   S  +AR  + + AI IN     N +  I   D        +  GKK + + 
Sbjct: 360 TLGIEPSKRQAREDVTNGAIYINGERQQNVEKVIDASDRIENKFTIVRRGKKKYFLV 416


>gi|116873028|ref|YP_849809.1| tyrosyl-tRNA synthetase [Listeria welshimeri serovar 6b str.
           SLCC5334]
 gi|123463834|sp|A0AJ48|SYY_LISW6 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|116741906|emb|CAK21030.1| tyrosyl-tRNA synthetase [Listeria welshimeri serovar 6b str.
           SLCC5334]
          Length = 419

 Score =  263 bits (673), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 158/417 (37%), Positives = 220/417 (52%), Gaps = 21/417 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I+Q ++   L     +  ++ Y G D +  S+H GHL   M+L   Q  GH+PI
Sbjct: 7   LEWRGAIYQQTDEEGLRKWVEEKQISLYCGIDPSGDSMHIGHLIPFMILRRFQNAGHRPI 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+GG T  IGDPS + E R++   ++I  N+E ++        +  G + A M+NN  W
Sbjct: 67  ILVGGATGTIGDPSGKKEERKLQSMEQISRNVESLRVQLGKIFDF-EGDSAASMVNNYDW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
              +  +D LR+ G  F+VN MLS + V SRL  E  +SF EF Y ILQA DF  L +  
Sbjct: 126 TKDVSILDFLRDYGKEFNVNTMLSKDIVASRL--EVGISFTEFAYQILQAMDFNHLYEFN 183

Query: 192 DCRLQMGGSDQWGNIICGIDL--GERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
           DCRLQ+GGSDQWGNI  G+DL   ++ +  K F LT PLLT A GTK GK+  GAIWLN 
Sbjct: 184 DCRLQIGGSDQWGNITAGLDLIRKKQGENAKAFGLTIPLLTKADGTKFGKSEGGAIWLNP 243

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE--INEAKKIIATEIT 307
           E T+PY F+Q+W N DD DVV + K  T L  +EID +AK   +E  +  A+K +A E+T
Sbjct: 244 EKTTPYEFYQFWINTDDRDVVKYLKYFTFLTETEIDELAKKVEEEPHLRAAQKTLAAEMT 303

Query: 308 TMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIV 357
             VH  E  E+A   +   F   + +          + +PT      EV+    L+  +V
Sbjct: 304 KFVHSEEALEQALKISKALFSGDVTALTADEIEQGFKDVPTFVAEDAEVN----LVDWLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
             G   S  +AR  + + AI IN     N +  I   D        +  GKK + + 
Sbjct: 360 SLGIEPSKRQAREDVTNGAIYINGERQQNVEKVIDASDRIENKFTIVRRGKKKYFLV 416


>gi|312869291|ref|ZP_07729458.1| tyrosine--tRNA ligase [Lactobacillus oris PB013-T2-3]
 gi|311095165|gb|EFQ53442.1| tyrosine--tRNA ligase [Lactobacillus oris PB013-T2-3]
          Length = 426

 Score =  263 bits (672), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 157/424 (37%), Positives = 232/424 (54%), Gaps = 25/424 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D L  L  RG I+Q ++   L  L  +  V+ Y G D T  SLH GHL   ++L   Q  
Sbjct: 13  DILEDLEWRGAINQCTDLEGLRDLLKEKKVSLYCGTDPTGDSLHIGHLIPFIMLKRFQLA 72

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK-YGTGKTDALM 125
           GH P  L+GGGT  IGDPS R   R++  ++++Q N E   G+    IK +GT   D  +
Sbjct: 73  GHHPYILIGGGTGFIGDPSGRKSERQLQTAEQVQHNKE---GLTKQMIKLFGTENFD--I 127

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           ++N  WL  I  +D LR+ G  F++N MLS E+V SRLK    +SF EF+Y ILQ+ DF+
Sbjct: 128 VDNYDWLSKISLLDFLRDYGKSFNINTMLSKEAVASRLK--NGISFTEFSYQILQSIDFL 185

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASGTKMGKTLSGA 244
            L    D +LQ+GG+DQWGN+  G+DL    K   K F LT PL+  A GTK GKT  GA
Sbjct: 186 HLNNTKDIQLQIGGADQWGNLTNGVDLIHSKKPNEKAFGLTIPLMLKADGTKFGKTAGGA 245

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN--EAKKII 302
           IWL+ + TSP+ F+Q+W N DD DVV + K  T L   EID +A+    E    EA++ +
Sbjct: 246 IWLDPKKTSPFTFYQFWLNQDDRDVVKYLKYFTFLSHKEIDELAEKVKTEPQKREAQRRL 305

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGL 352
           A E+T  VHG +  E+A   +   F  +I            + +P++ + K  ++    +
Sbjct: 306 AEEVTKFVHGEKAMEQAKKISEILFSGNIAELSTAELEQAFEKVPSVEVGKTPIN----I 361

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           +  +V +   TS  +AR  +K+ AI IN   +++E+  +   D      + +  GK+N+ 
Sbjct: 362 IDWLVNSEIETSKRQAREDIKNGAITINGRKVNDEEFIVDPSDNFDGKYVVVRKGKRNYF 421

Query: 413 ICHL 416
           +  +
Sbjct: 422 LAKV 425


>gi|119502753|ref|ZP_01624838.1| Tyrosine--tRNA ligase [marine gamma proteobacterium HTCC2080]
 gi|119461099|gb|EAW42189.1| Tyrosine--tRNA ligase [marine gamma proteobacterium HTCC2080]
          Length = 441

 Score =  263 bits (672), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 153/398 (38%), Positives = 220/398 (55%), Gaps = 29/398 (7%)

Query: 3   AFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
           A  S  LS L  RG I QI+    L         T Y G+D TA SLH G L  L++L  
Sbjct: 11  AMSSALLSDLRARGLIFQIAGEDTLAEWLDAEPRTLYCGFDPTADSLHIGSLVPLLMLRR 70

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD 122
            Q  GH+P++L+GG T +IGDPSF+   R +     +   + K++   S FI + +GK  
Sbjct: 71  FQLAGHRPLALVGGATGLIGDPSFKAAERNLNTPDVVANWVSKLQKQVSQFIDF-SGKNS 129

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQS-LSFLEFNYMILQA 181
           A ++NN  W   +  +  LR++G +FS+N M+  ESV+ R++RE S +SF EF YMILQ+
Sbjct: 130 AKVVNNLDWTAGMDVLTFLRDVGKYFSINNMIQKESVKQRIEREGSGISFTEFTYMILQS 189

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
           YDF EL + + C LQ+GGSDQWGNI  GIDL  RL   + F LT PL+  A GTK GKT 
Sbjct: 190 YDFSELYRQHQCGLQIGGSDQWGNITGGIDLTRRLHGGQAFGLTMPLVEKADGTKFGKTE 249

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPM--------SEIDRMAKLQGK 293
           SG IWL+   TSPY+F+Q+W N  D DV  F +  T L +        ++  R  + QG+
Sbjct: 250 SGTIWLDAHKTSPYSFYQFWLNTSDTDVYKFLRYFTFLSVEDIAAIEAADATREGRPQGQ 309

Query: 294 EINEAKKIIATEITTMVHGRE--EAEKAATAAM---ECFDMS------IHSQHMPTISIS 342
           +      I+A E+T +VHG E   A +  T A+   E + +       +    +PT +++
Sbjct: 310 Q------ILADEVTKLVHGEEGLAAAQRITQALFVGEAYTLGPDDLEQLALDGLPTTALN 363

Query: 343 KDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKIN 380
            + ++    L  L+   G  TS  + +  LK+ A+ IN
Sbjct: 364 AESLAP--TLTQLLCDVGMVTSGKQVKDALKNKAVFIN 399


>gi|118469309|ref|YP_888052.1| tyrosyl-tRNA synthetase [Mycobacterium smegmatis str. MC2 155]
 gi|118170596|gb|ABK71492.1| tyrosyl-tRNA synthetase [Mycobacterium smegmatis str. MC2 155]
          Length = 440

 Score =  263 bits (672), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 152/426 (35%), Positives = 235/426 (55%), Gaps = 23/426 (5%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L  RG I Q ++   L    ++G +T Y G+D TA SLHAGHL  L+ L   Q+ G
Sbjct: 12  ILDELDWRGLIAQSTDREALASDLAKGPMTVYSGFDPTAPSLHAGHLVPLLTLRRFQQAG 71

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQE-IQENIEKIKGIFSSFIKYGTGKTDALML 126
           H+PI L GG T +IGDP  RD   R M +++ + +  ++I+G    F+++    T A++ 
Sbjct: 72  HRPIVLAGGATGMIGDP--RDTGERTMNTEDTVADWADRIRGQLERFVEFDDSPTGAIVE 129

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN TW   +  I  LR+IG +FSVN ML  E+VR RL+ +  +S+ EF+YM+LQA D+VE
Sbjct: 130 NNLTWTGELSAISFLRDIGKYFSVNVMLDRETVRRRLEGD-GISYTEFSYMLLQANDYVE 188

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA-I 245
           L + + C LQ+GGSDQWGNI+ G+ L  +     + A+T+PL+T + G K GK+  G  +
Sbjct: 189 LHQRHGCALQVGGSDQWGNIVAGVRLVRQKIGATVHAMTTPLVTDSEGKKFGKSTGGGNL 248

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIA 303
           WL+ EMTSPY ++QY+ N  DADV+ + +  T L   E+  +A       +E  A++ +A
Sbjct: 249 WLDPEMTSPYAWYQYFVNTADADVLGYLRWFTFLTPDELAELADATENRPHERAAQRRLA 308

Query: 304 TEITTMVHGREEAEKAATAAMECFDMS-IHSQHMPTISISKDEVSRGM----------GL 352
            E+TT+VHG    +    A+   F    +      T+S +  E   G            +
Sbjct: 309 RELTTLVHGEGATKSVEYASRALFGRGELADLDESTLSAALREAGNGQVAELAPGGPDSI 368

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           + L+V  G + S   ARR +    + +NN+ + +++   +  DF   G + L  GK+   
Sbjct: 369 VDLLVATGLSNSKGAARRTVAEGGVYVNNARVESDEWVPQESDFLHEGWLVLRRGKR--- 425

Query: 413 ICHLCG 418
             H+ G
Sbjct: 426 --HIAG 429


>gi|15232946|ref|NP_186915.1| emb2768 (EMBRYO DEFECTIVE 2768); ATP binding / RNA binding /
           aminoacyl-tRNA ligase/ nucleotide binding /
           tyrosine-tRNA ligase [Arabidopsis thaliana]
 gi|6957729|gb|AAF32473.1| putative tyrosyl-tRNA synthetase [Arabidopsis thaliana]
 gi|62320566|dbj|BAD95182.1| putative tyrosyl-tRNA synthetase [Arabidopsis thaliana]
 gi|117168055|gb|ABK32110.1| At3g02660 [Arabidopsis thaliana]
 gi|332640324|gb|AEE73845.1| tyrS tyrosyl-tRNA synthetase [Arabidopsis thaliana]
          Length = 511

 Score =  263 bits (672), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 157/434 (36%), Positives = 235/434 (54%), Gaps = 23/434 (5%)

Query: 3   AFKSDFLSILSERGFIHQISNPRELDILCSQGVVT---AYIGYDLTASSLHAGHLTQLML 59
            F+ + + IL ERG +  I++   L   CS   V     Y G+D TA SLH G+L  +++
Sbjct: 80  VFRPNVVDILEERGLLESITS-ENLRSACSDPKVAPLRVYCGFDPTAESLHLGNLLGIIV 138

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG 119
           L W Q+ GH+ + L+GG T  +GDPS +   R  + +  +++NI  I  I    +     
Sbjct: 139 LSWFQRCGHQAVGLIGGATGRVGDPSGKSLERPELDADTLEKNIAGITKIIIKILGSNPS 198

Query: 120 KTDA-LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMI 178
              + ++ NN  W   +  +D L ++G F  V  M++ ESV+ RL+ EQ +S+ EF Y +
Sbjct: 199 PGGSYVIFNNYDWWKDMTMLDFLNKVGRFARVGTMMAKESVKKRLESEQGMSYTEFTYQL 258

Query: 179 LQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK--LFALTSPLLTTASGTK 236
           LQAYDF+ L KN    +Q+GGSDQWGNI  G DL  ++   +   + LT PLL    GTK
Sbjct: 259 LQAYDFLHLFKNEGINVQIGGSDQWGNITAGTDLIRKILQAEEAAYGLTFPLLLKNDGTK 318

Query: 237 MGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI----DRMAKLQG 292
            GK+  GAIWL+  M SPY F+QY+ ++ D DV+ F K LT L + EI    D+M+K  G
Sbjct: 319 FGKSEDGAIWLSPSMLSPYKFYQYFFSVPDVDVIRFLKTLTFLSLDEIKILEDQMSK-PG 377

Query: 293 KEINEAKKIIATEITTMVHGRE---EAEKAATAAMECFDMSIH-------SQHMPTISIS 342
              N A+  +A E+T  VHG E   EA KA  A     +  +        ++ +P+ S+ 
Sbjct: 378 YVPNTAQIKLAEEVTRFVHGEEGLKEAIKATEALRPGAETKLDWNLIERIAEDIPSCSLP 437

Query: 343 KDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNI 402
            D VS G+ ++ L V AG   S + ARR LK     +NN  + +E  ++  +D      +
Sbjct: 438 IDRVS-GLSIVDLSVSAGLFESKSAARRMLKQGGFYMNNERVDDENKRVDEEDIVEGRGL 496

Query: 403 KLSFGKKNHIICHL 416
            LS GKKN ++  +
Sbjct: 497 VLSAGKKNKVVVRI 510


>gi|309813251|ref|ZP_07706971.1| tyrosine--tRNA ligase [Dermacoccus sp. Ellin185]
 gi|308432788|gb|EFP56700.1| tyrosine--tRNA ligase [Dermacoccus sp. Ellin185]
          Length = 433

 Score =  263 bits (672), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 148/421 (35%), Positives = 232/421 (55%), Gaps = 12/421 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ L  L  RG + Q ++  +L    + G +T Y G+D TA SLH G+L QL+ L  LQ+
Sbjct: 15  SNILDELQWRGAVAQTTDETQLRDALANGPLTVYCGFDPTAPSLHFGNLVQLIQLRRLQR 74

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQE-IQENIEKIKGIFSSFIKYGTGKTDAL 124
            GH+ I L+GG T +IGDP  R  + R++++++   + + +I+     F+ +  G   A+
Sbjct: 75  AGHRVIVLVGGSTGLIGDP--RPSAERVLKTKDQTAQWVARIREQVQPFLDF-DGDNPAI 131

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
            +NN  W   I  +D LR+ G  F VN M+  ++V +RL  EQ +S+ EF+Y ILQA D+
Sbjct: 132 AVNNLDWTQGISALDFLRDYGKHFRVNGMIKKDAVAARLNSEQGISYTEFSYQILQALDY 191

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           + L + Y C LQ+GGSDQWGN+I G DL   ++   +  LTSPLLT ASG K GK+   A
Sbjct: 192 LHLFREYGCTLQLGGSDQWGNLIAGSDLIRSVEGKSVHVLTSPLLTDASGQKYGKSEGNA 251

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKII 302
           IWL+ +MTSPY F+QY+ N++D++V+   K +T     E+ ++ +   +E     A+K +
Sbjct: 252 IWLDAQMTSPYAFYQYFLNVEDSEVIKLIKFITDRTKDEVAQLERAVAEEPFKRAAQKTL 311

Query: 303 ATEITTMVHGREEAEKAATAAMECFD------MSIHSQHMPTISISKDEVSRGMGLLTLI 356
           A ++TT+VHG      A  A+   F       +   +       +   EVS G  L   +
Sbjct: 312 AADVTTLVHGEAATAGAIAASEAMFGKGDVTALDAGTLRDAVAELPGGEVSPGTTLTDAL 371

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +  G A S N ARR +   AI +NN+ + + + ++   DF       +  G+K+     L
Sbjct: 372 IAVGIAESRNAARRLIGDGAISVNNAKLDDPEHELNADDFLHGVAAIIKRGRKHQAAARL 431

Query: 417 C 417
            
Sbjct: 432 A 432


>gi|297571517|ref|YP_003697291.1| tyrosyl-tRNA synthetase [Arcanobacterium haemolyticum DSM 20595]
 gi|296931864|gb|ADH92672.1| tyrosyl-tRNA synthetase [Arcanobacterium haemolyticum DSM 20595]
          Length = 419

 Score =  263 bits (672), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 144/419 (34%), Positives = 232/419 (55%), Gaps = 12/419 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D L  L  RG I Q S+  EL    ++  ++ Y G+D TA+SLH GHL  + ++  LQ  
Sbjct: 3   DVLEELQWRGLIAQHSDIDELRKALNEEKISFYCGFDPTAASLHHGHLVAVKMMRHLQMA 62

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI L+GG T +IGDP  + E R +   + + +  + ++    S + +  G+  A+ +
Sbjct: 63  GHRPIVLVGGATGLIGDPRPKGE-RSLNTRETVAQWTQSLRDQLESLLDF-DGENAAITV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W  S+  ID LR++G  F +  MLS + V  RL+ ++ +SF EF+Y ILQA D++E
Sbjct: 121 NNLDWTQSMSAIDFLRDLGKHFRMGTMLSKDIVARRLQSDEGISFTEFSYQILQANDYLE 180

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + Y+C L++GG+DQWGNI+ G++L  +++   +  LT+ L+T + GTK GKT  GA+W
Sbjct: 181 LFRRYNCTLELGGNDQWGNIVGGMELIRKVEGKSVHVLTNQLITKSDGTKFGKTEGGAVW 240

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE---INEAKKIIA 303
           LN EM SPY F+Q+W N  D DV+   K  T LP   I+ + +++  E     EA++++A
Sbjct: 241 LNPEMLSPYKFYQFWLNTADNDVIRMLKVFTFLPKERIEEL-EVEVAERAFAREAQRVLA 299

Query: 304 TEITTMVHGREEAEKAATAAMECF------DMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            E+TT VHG E   +   A+   F      D+   +       +   +   G  L  ++V
Sbjct: 300 DEVTTWVHGAETTARVKDASAVLFGKKEPADVDAATLRDAVAELPSVKAELGASLQDVLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
              F      ARR + +  + +NN  + +E+  +   D  + G I +  G+KN  + H+
Sbjct: 360 DLAFEKGRGAARRTIGAGGVSLNNQKVDDEERVLTEADVLAGGVILIRKGRKNMAVIHI 418


>gi|124002514|ref|ZP_01687367.1| tyrosyl-tRNA synthetase [Microscilla marina ATCC 23134]
 gi|123992343|gb|EAY31711.1| tyrosyl-tRNA synthetase [Microscilla marina ATCC 23134]
          Length = 450

 Score =  263 bits (672), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 140/407 (34%), Positives = 226/407 (55%), Gaps = 23/407 (5%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           K +F+  L  RG +H      E  +  ++ +   YIG+D TA S+H G+L  LM+L  LQ
Sbjct: 13  KKNFIEELRWRGMLHDAMPGTEEQL--NKEMTVGYIGFDPTADSIHIGNLATLMMLKHLQ 70

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GHKP++L+GG T ++GDPS +   R ++  + ++ N   I    + F+ +  G+  A 
Sbjct: 71  MAGHKPVALVGGATGMVGDPSGKSAERNLLDVKTLRHNEAAIGKQLAKFLDFDCGENSAE 130

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           +LNN  W   + +++ LR++G   ++N M + +SV+ RL  E  LSF EF+Y +LQ YDF
Sbjct: 131 LLNNYDWFGQMNFLEFLRDVGKHLTINYMTAKDSVKKRL--ESGLSFTEFSYQLLQGYDF 188

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L KN +C++QMGGSDQWGNI  G +L  R+     FA+T PL+T   G+K GK++ G 
Sbjct: 189 FWLNKNKNCKIQMGGSDQWGNITTGTELIRRMGGGNAFAVTCPLITKTDGSKFGKSVGGN 248

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WL+ + TSPY F+Q+W N+DD++     +  T L    I++       +    K+I+A 
Sbjct: 249 VWLDPKRTSPYKFYQFWLNVDDSETSKLLRVFTLLDQETIEKHEADYANDPRMLKRILAE 308

Query: 305 EITTMVHGREEAEKAATAA--------MECFDMSIHS------QHMPTISISKDEVSRGM 350
           E+T MVH +EE ++A  A+        +E F+ +  +      + +P  + +K E     
Sbjct: 309 EVTRMVHSQEELDRAQKASGLLFGKSTLEDFETTDEATLLDVFEGIPKKNYTKAEFDAFD 368

Query: 351 GLLTLIVKA-----GFATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
             + LI  A         S +E RR +K+N IKIN   ++ ++ + K
Sbjct: 369 STVDLIASAMTEDEAKPVSKSEVRRLIKNNGIKINQKAVTKDQGESK 415


>gi|332312039|gb|EGJ25134.1| Tyrosyl-tRNA synthetase [Listeria monocytogenes str. Scott A]
          Length = 429

 Score =  263 bits (671), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 152/393 (38%), Positives = 213/393 (54%), Gaps = 27/393 (6%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           K + +  L  RG I+Q ++   L     +  ++ Y G D +  S+H GHL   M+L   Q
Sbjct: 10  KMNIIDELEWRGAIYQQTDEEGLRKWVEEKQISLYCGIDPSGDSMHIGHLIPFMILRRFQ 69

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GH+PI L+GG T  IGDPS + E R++   ++I +N+E ++        +  G + A 
Sbjct: 70  NAGHRPIILVGGATGTIGDPSGKKEERKLQSMEQISKNVESLRVQLGKIFDF-EGNSAAS 128

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M+NN  W   +  +D LR+ G  F+VN MLS + V SRL  E  +SF EF Y ILQA DF
Sbjct: 129 MVNNYDWTKDVSILDFLRDYGKEFNVNTMLSKDIVASRL--EVGISFTEFAYQILQAMDF 186

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDL--GERLKTPKLFALTSPLLTTASGTKMGKTLS 242
             L +  DCRLQ+GGSDQWGNI  G+DL   ++ +  K F LT PLLT A GTK GK+  
Sbjct: 187 NHLYEFNDCRLQIGGSDQWGNITAGLDLIRKKQGENAKAFGLTIPLLTKADGTKFGKSEG 246

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE--INEAKK 300
           GAIWLN E T+PY F+Q+W N DD DVV + K  T L  +EID +AK    E  +  A+K
Sbjct: 247 GAIWLNPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLTEAEIDELAKQVETEPHLRAAQK 306

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGM---------- 350
            +A E+T  VH  E  E+A   +   F   +        +++ DE+ +G           
Sbjct: 307 TLAAEMTKFVHSEEALEQALKISKALFSGDVK-------ALTADEIEQGFKDVPTFVAED 359

Query: 351 ---GLLTLIVKAGFATSTNEARRHLKSNAIKIN 380
               L+  +V  G   S  +AR  + + AI IN
Sbjct: 360 TEANLVDWLVTLGIEPSKRQAREDVANGAIYIN 392


>gi|94676968|ref|YP_588559.1| tyrosyl-tRNA synthetase [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
 gi|94220118|gb|ABF14277.1| tyrosyl-tRNA synthetase [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
          Length = 424

 Score =  263 bits (671), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 145/384 (37%), Positives = 216/384 (56%), Gaps = 9/384 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ER  I  I++ + L    ++G ++ Y G+D T  SLH GHL  L+ L   Q 
Sbjct: 4   SNLIQQLQERDLIANITDEKGLAKRLNEGTISIYCGFDPTNDSLHVGHLLPLLCLKRFQL 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+PI L+GG TS+IGDPSF+   R++  +       EKIK   S F+ +      A++
Sbjct: 64  AGHRPIILIGGATSLIGDPSFKLTERKLNPTYTTNLWSEKIKKNLSLFLDFNKSNNSAII 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQS-LSFLEFNYMILQAYDF 184
           +NN  W  S+  +  LRE+G  FS+N+M++ E+++ RL R +S +SF EF+Y +LQ YDF
Sbjct: 124 VNNYDWFRSMNILTFLREVGKNFSINQMINKEAIKLRLNRNESGISFAEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L++ Y   LQ+GGSDQWGNI+ GIDL  ++    ++ LT PLLT + GTK GKT    
Sbjct: 184 TYLSQKYGVILQIGGSDQWGNILSGIDLTRKIYQQTIYGLTIPLLTKSDGTKFGKTEDNV 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN--EAKKII 302
           IWL+ + TSPY  +Q+W N  D DV  F K  T + ++EI  + K      N   A+ I+
Sbjct: 244 IWLDPKKTSPYQLYQFWLNTTDYDVYRFLKFFTFMSLAEITAIEKQNNMSENRQRAQYIL 303

Query: 303 ATEITTMVHGREEAEKAATAAMECFD-MSIHSQHMPTISISKD-----EVSRGMGLLTLI 356
           A  +T M+HG +    A       F  +  H      I +++D      +++ + L   +
Sbjct: 304 AEYMTRMIHGNQGLAAAQRITTSLFTGLFKHLTENDFIQLAQDGIPMVNLTQNVDLPQAL 363

Query: 357 VKAGFATSTNEARRHLKSNAIKIN 380
           V A  A S  +AR+ + SNAI IN
Sbjct: 364 VAASLAPSYGQARKMIISNAIAIN 387


>gi|312891741|ref|ZP_07751249.1| tyrosyl-tRNA synthetase [Mucilaginibacter paludis DSM 18603]
 gi|311295772|gb|EFQ72933.1| tyrosyl-tRNA synthetase [Mucilaginibacter paludis DSM 18603]
          Length = 427

 Score =  263 bits (671), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 135/391 (34%), Positives = 216/391 (55%), Gaps = 19/391 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG +H I    E   L ++G+V+ YIG+D T+ SLH G L Q+M L   Q+ 
Sbjct: 2   NFVEELRWRGILHDIMPGTEE--LLNKGMVSGYIGFDPTSDSLHVGSLAQIMTLIHFQRA 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP +L+GG T ++GDPS +   R ++    +Q+N+  I+     F+ +  G+  A M+
Sbjct: 60  GHKPFALVGGATGMVGDPSGKSAERNLLSEDALQKNLAGIQAQLEKFLDFDCGQNSAEMV 119

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W     ++D +R++G   +VN M++ +SV+ RL+ E  +SF EF+Y ++Q YDF  
Sbjct: 120 NNYDWFKDFTFLDFIRDVGKHITVNYMMAKDSVKKRLEGETGMSFTEFSYQLVQGYDFYY 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L KN +C LQMGGSDQWGNI+ G +   R    + FALT+ L+  A G+K GK+  G IW
Sbjct: 180 LWKNKNCMLQMGGSDQWGNIVTGTEFIRRKSAGEAFALTTQLIKKADGSKFGKSEGGNIW 239

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKKIIAT 304
           L+ + TSPY F+Q+W N  D D  S+ +  T      I+ +         +   +K +A 
Sbjct: 240 LDADKTSPYQFYQFWLNASDEDAKSYIRIFTLFDQQTIEALETEHFAAPHLRVLQKALAK 299

Query: 305 EITTMVHGREEAEKAATAAMECF------------DMSIHS--QHMPTISISKDEVSRGM 350
           +IT  VHG  E EKA  ++   F            D  + +    +P  +I++ +   G+
Sbjct: 300 DITIRVHGEHEYEKAIKSSEFLFGNTGIEFLNELSDKEVLALFSGVPNFTIARADFGSGV 359

Query: 351 GLLTLI-VKAGFATSTNEARRHLKSNAIKIN 380
            ++ L+  ++    S  EA++ ++S  + IN
Sbjct: 360 NVVDLLAAQSAVFPSKGEAKKMIQSGGVAIN 390


>gi|38233766|ref|NP_939533.1| tyrosyl-tRNA synthetase [Corynebacterium diphtheriae NCTC 13129]
 gi|81401476|sp|Q6NHG2|SYY_CORDI RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|38200027|emb|CAE49696.1| tyrosyl-tRNA synthetase [Corynebacterium diphtheriae]
          Length = 420

 Score =  263 bits (671), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 153/411 (37%), Positives = 225/411 (54%), Gaps = 17/411 (4%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I+Q ++   L   C +  +T Y G+D T  SLHAGHL  +++L   Q+ GH+PI
Sbjct: 7   LQWRGLINQSTDIDALREACEK-PITLYCGFDPTGDSLHAGHLVPMIMLRRFQEAGHRPI 65

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQE-IQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           +L GG T  IGDP  RD   R M SQ+ I+ N+E IK    SF+++  G + A+M+NN  
Sbjct: 66  TLAGGATGFIGDP--RDVGERSMLSQDTIEHNLESIKKQLRSFVRF-DGDSPAIMVNNAD 122

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           W  S+  +D LR++G  FS+N ML  E+V+ RL+ +  +S+ EF+YM+LQA DFV+L + 
Sbjct: 123 WTMSMSVVDFLRDVGKNFSLNTMLDRETVKRRLETD-GISYTEFSYMLLQANDFVQLNRE 181

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA-IWLNK 249
           YDC LQ+GG DQWGNI+ G+DL  R+   K  ALT PL+T A G K GK+  G  +WL+ 
Sbjct: 182 YDCVLQIGGGDQWGNIVSGVDLNRRVSGTKTHALTVPLVTDAQGQKFGKSTGGGKLWLDP 241

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATEIT 307
           E TS Y+++QY+ N  D+ V+ + +  T L   EI  +     +   +  A++ +A E+T
Sbjct: 242 EKTSAYSWYQYFLNAGDSVVIDYLRWFTFLTQEEIAELETEVRERPHLRAAQRRLAQEMT 301

Query: 308 TMVHGREEAEKAATAAMECF--------DMSIHSQHMPTISISKDEVSRGMGLLTLIVKA 359
            +VHG +       AA   F        D +     +    I +        ++ L++ A
Sbjct: 302 DLVHGHDATVSVELAAQALFGRASLQDLDEATLDGALSETVIFEVPAGESPTIIDLLIGA 361

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
           G   S   ARR +K     +NN  I +E  Q           + L  GKKN
Sbjct: 362 GLVDSKGAARRTIKEGGAYVNNERIESEDWQPTDDVLLHGAWLVLRKGKKN 412


>gi|68535935|ref|YP_250640.1| tyrosyl-tRNA synthetase [Corynebacterium jeikeium K411]
 gi|97201322|sp|Q4JVY5|SYY_CORJK RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|68263534|emb|CAI37022.1| tyrS [Corynebacterium jeikeium K411]
          Length = 428

 Score =  263 bits (671), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 150/398 (37%), Positives = 232/398 (58%), Gaps = 22/398 (5%)

Query: 6   SDFLSILSE---RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
           SD ++I+ E   RG I+Q ++   L    +Q  +T Y G+D T SSLHAGHL  L++L  
Sbjct: 2   SDNMNIIDELQWRGLINQSTDLEALK-EATQNPITLYCGFDPTGSSLHAGHLVPLIMLKR 60

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRR-MMRSQEIQENIEKIKGIFSSFIKYGTGKT 121
            Q+ GH+PI+L GG T +IGDP  RD   R M+  ++I EN+  IK    +F+ + T  +
Sbjct: 61  FQQFGHRPITLAGGATGMIGDP--RDVGERSMLTEEQIGENMVAIKKQLEAFVDF-TEDS 117

Query: 122 D----ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYM 177
           D    A+M+NN  W+  +  I+ LR++G  FS+N ML  ++V+ RL+ +  +S+ EF+YM
Sbjct: 118 DVDSPAVMVNNADWISQMNVIEYLRDVGKNFSLNTMLDRDTVKRRLESD-GISYTEFSYM 176

Query: 178 ILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
           +LQA D+V L   +DC LQ+GG DQWGNI+ G+DL  R+   K+  LT PL+T A G K 
Sbjct: 177 LLQANDYVHLHNEFDCVLQIGGGDQWGNIVSGVDLNRRVNGAKVHGLTVPLVTDAEGNKF 236

Query: 238 GKTLSGA-IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI- 295
           GK+  G  +WL+ ++TSPY+++QY+ N  D+ V+ + +  T L   EI  + +   +E  
Sbjct: 237 GKSTGGGKLWLDPQLTSPYSWYQYFINAGDSVVIDYLRWFTFLSQEEIAELERKVAEEPF 296

Query: 296 -NEAKKIIATEITTMVHGREEAEKAATAAMECFDMS-IHSQHMPTISISKD-----EVSR 348
             EA++++A E+TT+VHG    E    AA   F  + +     PT++ +       EV  
Sbjct: 297 KREAQRVLAREMTTLVHGAAATEAVELAAQALFGKAELQDLDEPTLASALQETEVAEVGA 356

Query: 349 GMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISN 386
              +L L+V++G   S   ARR +      +NN  I +
Sbjct: 357 DATILDLLVESGLEKSKGAARRTVGEGGAYVNNQRIED 394


>gi|302528030|ref|ZP_07280372.1| tyrosyl-tRNA synthetase [Streptomyces sp. AA4]
 gi|302436925|gb|EFL08741.1| tyrosyl-tRNA synthetase [Streptomyces sp. AA4]
          Length = 424

 Score =  263 bits (671), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 144/400 (36%), Positives = 228/400 (57%), Gaps = 15/400 (3%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  LS RG I Q ++   L     +G +T Y G+D TA SLHAG+L  L++L   Q+ G
Sbjct: 5   ILDELSWRGLIAQSTDIDALRRELDRGPLTLYCGFDPTAPSLHAGNLVPLLMLKRFQRAG 64

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN-IEKIKGIFSSFIKYGTGKTDALML 126
           H+PI L GG T +IGDP  RD   R + + ++  +   +I+G    F+ +    T A++ 
Sbjct: 65  HRPIVLAGGATGMIGDP--RDNGERTLNTLDVVADWAGRIRGQLERFVDFDDSPTGAIVE 122

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W      ++ LR++G  FSVN ML+ E+V+ RL+ +  +S+ EF+Y++LQ+ D++E
Sbjct: 123 NNLDWTGKQNTLEFLRDVGKHFSVNVMLNRETVKRRLEGD-GMSYTEFSYLLLQSQDYLE 181

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA-I 245
           L + + C+LQ+GGSDQWGN++ G+DL  R++     ALT+PL+T A G K GK+  G  +
Sbjct: 182 LYRKHGCKLQVGGSDQWGNLVGGVDLIRRVEGGAAHALTAPLVTDAEGRKFGKSTGGGNV 241

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIA 303
           WL+ E+TSPY ++QY+ N+ DADV+ + +  T L   EID +AK   +   +  A+K +A
Sbjct: 242 WLDPELTSPYAWYQYFVNVGDADVLRYLRLFTFLDQEEIDALAKDTEERPHLRAAQKRLA 301

Query: 304 TEITTMVHGREEAEKAATAAMECFDMS-IHSQHMPTISISKDEVSRG-------MGLLTL 355
            E T +VHG ++  +   A+   F    +     PT+  +  EV  G         ++ L
Sbjct: 302 EEFTNLVHGEDQTRQVIAASQALFGRGELTGLDGPTLDAAMAEVPNGKVEPAGDATIVDL 361

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           ++  G   S   ARR +K     +NN  I++E+ +    D
Sbjct: 362 LLAGGLVDSKGAARRTVKEGGAYVNNVKIADEEWKPSASD 401


>gi|189502000|ref|YP_001957717.1| hypothetical protein Aasi_0587 [Candidatus Amoebophilus asiaticus
           5a2]
 gi|259516964|sp|B3ERY6|SYY_AMOA5 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|189497441|gb|ACE05988.1| hypothetical protein Aasi_0587 [Candidatus Amoebophilus asiaticus
           5a2]
          Length = 427

 Score =  263 bits (671), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 153/429 (35%), Positives = 230/429 (53%), Gaps = 30/429 (6%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           DF++ L  RG IH I+   E  +   + ++T YIG+D TA SLH G+L  +MLL   Q  
Sbjct: 3   DFIANLRWRGMIHDITPGLEAQL--QKEMITGYIGFDPTAPSLHVGNLATIMLLKHFQLA 60

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKPI+++GG T +IGDPSF+   R+ +  +E+  N   I      F+ + +    A +L
Sbjct: 61  GHKPIAVVGGATGMIGDPSFKSTERKFLSEEELLHNQSCIMKQLKCFLDFSSSANTAELL 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W     ++  LRE+G   S+N M++ ESV+ RL  E  +SF EF+Y +LQ YDF  
Sbjct: 121 NNIDWFKDFGFLRFLREVGKHISINYMMAKESVKRRL--EDGISFTEFSYQLLQGYDFYY 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L      +LQMGG+DQWGN+  GI+L  R    + FALT+PL+T A GTK GK+  G IW
Sbjct: 179 LYNTKGVKLQMGGADQWGNLTTGIELIRRKTGEEAFALTAPLITKADGTKFGKSEQGNIW 238

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEA--KKIIAT 304
           L+  MTSPY F+Q+W N  D D     K  T L   EID + +L  +  ++   +K IA 
Sbjct: 239 LDSTMTSPYEFYQFWLNCTDEDACRLIKVFTLLSKEEIDNLIELHVQAPHQRILQKQIAK 298

Query: 305 EITTMVHGREEAEKAATAAMECF--------------DMSIHSQHMPTISISKDEVSRGM 350
           E+T  VH   +  +A   +   F              D  +  + +P + I+  +++   
Sbjct: 299 ELTIRVHSETDYMQARKTSELLFGHATAEDLWELSEKDFKVIFKSIPEVHITLTQLTEAE 358

Query: 351 GLLTLIVKAGFA---TSTNEARRHLKSNAIKINNSIISN--EKLQIK-LQDFDSTGNIKL 404
            +L L+   GF     S  E RR ++  ++ +N   I++  +K  +K LQD      + +
Sbjct: 359 HMLDLVASTGFGIMFNSKGEVRRAIQEGSLSVNKEKITDPLQKPNLKLLQD----KYLLV 414

Query: 405 SFGKKNHII 413
             GKK+H +
Sbjct: 415 QRGKKHHYL 423


>gi|284801990|ref|YP_003413855.1| tyrosyl-tRNA synthetase [Listeria monocytogenes 08-5578]
 gi|284995132|ref|YP_003416900.1| tyrosyl-tRNA synthetase [Listeria monocytogenes 08-5923]
 gi|284057552|gb|ADB68493.1| tyrosyl-tRNA synthetase [Listeria monocytogenes 08-5578]
 gi|284060599|gb|ADB71538.1| tyrosyl-tRNA synthetase [Listeria monocytogenes 08-5923]
          Length = 429

 Score =  263 bits (671), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 152/393 (38%), Positives = 213/393 (54%), Gaps = 27/393 (6%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           K + +  L  RG I+Q ++   L     +  ++ Y G D +  S+H GHL   M+L   Q
Sbjct: 10  KMNIIDELEWRGAIYQQTDEEGLRKWVEEKQISLYCGIDPSGDSMHIGHLIPFMILRRFQ 69

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GH+PI L+GG T  IGDPS + E R++   ++I +N+E ++        +  G + A 
Sbjct: 70  NAGHRPIILVGGATGTIGDPSGKKEERKLQSMEQISKNVESLRVQLGKIFDF-EGNSAAS 128

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M+NN  W   +  +D LR+ G  F+VN MLS + V SRL  E  +SF EF Y ILQA DF
Sbjct: 129 MVNNYDWTKDVSILDFLRDYGKEFNVNTMLSKDIVASRL--EVGISFTEFAYQILQAMDF 186

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDL--GERLKTPKLFALTSPLLTTASGTKMGKTLS 242
             L +  DCRLQ+GGSDQWGNI  G+DL   ++ +  K F LT PLLT A GTK GK+  
Sbjct: 187 NHLYEFNDCRLQIGGSDQWGNITAGLDLIRKKQGENAKAFGLTIPLLTKADGTKFGKSEG 246

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE--INEAKK 300
           GAIWLN E T+PY F+Q+W N DD DVV + K  T L  +EID +AK    E  +  A+K
Sbjct: 247 GAIWLNPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLTEAEIDELAKQVETEPHLRAAQK 306

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGM---------- 350
            +A E+T  VH  E  E+A   +   F   +        +++ DE+ +G           
Sbjct: 307 TLAAEMTKFVHSEEALEQALKISKALFSGDVK-------ALTADEIEQGFKDVPTFVAED 359

Query: 351 ---GLLTLIVKAGFATSTNEARRHLKSNAIKIN 380
               L+  +V  G   S  +AR  + + AI IN
Sbjct: 360 SEANLVDWLVTLGIEPSKRQAREDVGNGAIYIN 392


>gi|313618700|gb|EFR90627.1| tyrosyl-tRNA synthetase [Listeria innocua FSL S4-378]
          Length = 429

 Score =  262 bits (670), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 158/427 (37%), Positives = 224/427 (52%), Gaps = 27/427 (6%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           K + +  L  RG I+Q ++   L     +   + Y G D +  S+H GHL   M+L   Q
Sbjct: 10  KMNIIDELEWRGAIYQQTDEEGLRKWVEEKQXSLYCGIDPSGDSMHIGHLIPFMILRRFQ 69

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GH+PI L+GG T  IGDPS + E R++   ++I +N+E ++        +  G + A 
Sbjct: 70  NAGHRPIILVGGATGTIGDPSGKKEERKLQSMEQISKNVESLRVQLGKIFDF-EGDSAAS 128

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M+NN  W   +  +D LR+ G  F+VN MLS + V SRL  E  +SF EF Y ILQA DF
Sbjct: 129 MVNNYDWTKDVSILDFLRDYGKEFNVNTMLSKDIVASRL--EVGISFTEFAYQILQAMDF 186

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDL--GERLKTPKLFALTSPLLTTASGTKMGKTLS 242
             L +  DCRLQ+GGSDQWGNI  G+DL   ++ +  K F LT PLLT A GTK GK+  
Sbjct: 187 NHLYEFNDCRLQIGGSDQWGNITAGLDLIRKKQGENAKAFGLTIPLLTKADGTKFGKSEG 246

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE--INEAKK 300
           GAIWLN E T+PY F+Q+W N DD DVV + K  T L  +EID +AK   +E  +  A+K
Sbjct: 247 GAIWLNPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLTEAEIDELAKQVEEEPHLRAAQK 306

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG----------- 349
            +A E+T  VH  E  E+A   +   F   +        +++ DE+ +G           
Sbjct: 307 TLAAEMTKFVHSEEALEQALKISKALFSGDV-------TALTADEIEQGFKDVPTFVAED 359

Query: 350 --MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFG 407
             + L+  +V  G   S  +AR  + + AI IN     N +  I   D        +  G
Sbjct: 360 VEVNLVDWLVSLGIEPSKRQAREDVTNGAIYINGERQQNVEKVIDASDRIENKFTIVRRG 419

Query: 408 KKNHIIC 414
           KK + + 
Sbjct: 420 KKKYFLV 426


>gi|313623573|gb|EFR93749.1| tyrosyl-tRNA synthetase [Listeria innocua FSL J1-023]
          Length = 429

 Score =  262 bits (670), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 159/424 (37%), Positives = 223/424 (52%), Gaps = 21/424 (4%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           K + +  L  RG I+Q ++   L     +   + Y G D +  S+H GHL   M+L   Q
Sbjct: 10  KMNIIDELEWRGAIYQQTDEEGLRKWVEEKQXSLYCGIDPSGDSMHIGHLIPFMILRRFQ 69

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GH+PI L+GG T  IGDPS + E R++   ++I +N+E ++        +  G + A 
Sbjct: 70  NAGHRPIILVGGATGTIGDPSGKKEERQLQSMEQISKNVESLRVQLGKIFDF-EGDSAAS 128

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M+NN  W   +  +D LR+ G  F+VN MLS + V SRL  E  +SF EF Y ILQA DF
Sbjct: 129 MVNNYDWTKDVSILDFLRDYGKEFNVNTMLSKDIVASRL--EVGISFTEFAYQILQAMDF 186

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDL--GERLKTPKLFALTSPLLTTASGTKMGKTLS 242
             L +  DCRLQ+GGSDQWGNI  G+DL   ++ +  K F LT PLLT A GTK GK+  
Sbjct: 187 NHLYEFNDCRLQIGGSDQWGNITAGLDLIRKKQGENAKAFGLTIPLLTKADGTKFGKSEG 246

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE--INEAKK 300
           GAIWLN E T+PY F+Q+W N DD DVV + K  T L  +EID +AK   +E  +  A+K
Sbjct: 247 GAIWLNPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLTEAEIDELAKQVEEEPHLRAAQK 306

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGM 350
            +A E+T  VH  E  E+A   +   F   + +          + +PT      EV+   
Sbjct: 307 TLAAEMTKFVHSEEALEQALKISKALFSGDVTALTADEIEQGFKDVPTFVAEDAEVN--- 363

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            L+  +V  G   S  +AR  + + AI IN     N +  I   D        +  GKK 
Sbjct: 364 -LVDWLVSLGIEPSKRQAREDVTNGAIYINGERQQNVEKVIDASDRIENKFTIVRRGKKK 422

Query: 411 HIIC 414
           + + 
Sbjct: 423 YFLV 426


>gi|494693|pdb|1TYD|E Chain E, Structure Of Tyrosyl-Trna Synthetase Refined At 2.3
           Angstroms Resolution. Interaction Of The Enzyme With The
           Tyrosyl Adenylate Intermediate
          Length = 319

 Score =  262 bits (670), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 135/316 (42%), Positives = 193/316 (61%), Gaps = 5/316 (1%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D L+ L  RG ++Q ++   L  L ++  VT Y G+D TA SLH GHL  ++ +   Q+ 
Sbjct: 2   DLLAELQWRGLVNQTTDEDGLRKLLNEERVTLYCGFDPTADSLHIGHLASILTMRRFQQA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI+L+GG T +IGDPS +   R +   + ++    +IK     F+ +      A + 
Sbjct: 62  GHRPIALVGGATGLIGDPSGKKSERTLNAKETVEAWSARIKEQLGRFLDFEADGNPAKIK 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W+  +  I  LR++G  FSVN M++ ESV+SR+  E  +SF EF+YM+LQAYDF+ 
Sbjct: 122 NNYDWIGPLDVITFLRDVGKHFSVNYMMAKESVQSRI--ETGISFTEFSYMMLQAYDFLR 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASGTKMGKTLSGAI 245
           L +   CRLQ+GGSDQWGNI  G++L  + K   + F LT PL+T A GTK GKT SG I
Sbjct: 180 LYETEGCRLQIGGSDQWGNITAGLELIRKTKGEARAFGLTIPLVTKADGTKFGKTESGTI 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIA 303
           WL+KE TSPY F+Q+W N DD DV+ + K  T L   EI+ + +   +  E   A+K +A
Sbjct: 240 WLDKEKTSPYEFYQFWINTDDRDVIRYLKYFTFLSKEEIEALEQELREAPEKRAAQKTLA 299

Query: 304 TEITTMVHGREEAEKA 319
            E+T +VHG E   +A
Sbjct: 300 EEVTKLVHGEEALRQA 315


>gi|262184147|ref|ZP_06043568.1| tyrosyl-tRNA synthetase [Corynebacterium aurimucosum ATCC 700975]
          Length = 419

 Score =  262 bits (670), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 155/411 (37%), Positives = 229/411 (55%), Gaps = 17/411 (4%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I+Q ++   L   C +  +T Y G+D T  SLHAGHL  +++L   QK GH PI
Sbjct: 7   LQWRGLINQSTDLDALREACEE-PITLYCGFDPTGDSLHAGHLVPMIMLRRFQKAGHHPI 65

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQE-IQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           +L GG T  IGDP  RD   R M SQE I +N+  IK     FI +  G+  A M+NN  
Sbjct: 66  ALAGGATGQIGDP--RDVGERTMLSQETINDNMVAIKKQLRQFIDF-AGENAATMVNNAD 122

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           W   +  ID LR++G  FS+N ML  ++V+ RL+ +  +S+ EF+YM+LQ+ D+V L   
Sbjct: 123 WTSKMTVIDFLRDVGKNFSLNTMLDRDTVKRRLESD-GISYTEFSYMLLQSNDYVHLHDE 181

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA-IWLNK 249
           +DC LQ+GG DQWGNI+ G+DL  R+K  K+  LT PL+T A G K GK+  G  +WL+ 
Sbjct: 182 FDCILQIGGGDQWGNIVSGVDLNRRVKGAKVHGLTVPLVTDAQGQKFGKSTGGGKLWLDP 241

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIATEIT 307
           E TSPY+++QY+ N  D+ V+ + +  T L   EI    +   +E    EA++ +A E+T
Sbjct: 242 EKTSPYSWYQYFLNAGDSVVIDYLRWFTFLSQEEIAEYEQKVAEEPFRREAQRRLAQEMT 301

Query: 308 TMVHGREEAE--KAATAAM----ECFDMSIHS--QHMPTISISKDEVSRGMGLLTLIVKA 359
            +VHG E  +  K AT A+    E  D+   +    +   +++         ++ L+V  
Sbjct: 302 NLVHGEEATKSVKLATQALFGKAELADLDEQTLVGALSETTVADIAAGEPRTIVDLLVAC 361

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
           G A S   ARR +K     +NN  I +++ +   +D      + L  GKKN
Sbjct: 362 GLADSKGAARRTIKEGGAYVNNQRIESDEWEPAAEDLLHGAWLVLRRGKKN 412


>gi|325299419|ref|YP_004259336.1| Tyrosyl-tRNA synthetase [Bacteroides salanitronis DSM 18170]
 gi|324318972|gb|ADY36863.1| Tyrosyl-tRNA synthetase [Bacteroides salanitronis DSM 18170]
          Length = 430

 Score =  262 bits (670), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 148/427 (34%), Positives = 226/427 (52%), Gaps = 22/427 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG +H +    E   L  + +VTAY+G D TA SLH GHL  +M+L   Q+ 
Sbjct: 2   NFVEELKWRGMVHNMMPGTEE--LLEKEMVTAYLGIDPTADSLHIGHLCGVMMLRHFQRC 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD-ALM 125
           GHKP++L+GG T +IGDPS + + R ++  + ++ N E IK     F+ + +   + A +
Sbjct: 60  GHKPLALVGGATGMIGDPSGKSQERNLLDEETLRHNQECIKKQLGKFLDFESDAPNRAEL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQAYD 183
           +NN  W+    ++D  R +G   +VN M++ +SV+ RL  E    LSF EF Y +LQ YD
Sbjct: 120 VNNYDWMKDFTFLDFARTVGKHITVNYMMAKDSVQKRLNGEARDGLSFTEFTYQLLQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ L +   C+LQ+GGSDQWGNI  G +L  R    ++FALT PL+T A GTK GKT SG
Sbjct: 180 FLHLYETRGCKLQLGGSDQWGNITTGAELIRRTNGGEVFALTCPLVTKADGTKFGKTESG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKKI 301
            +WL+   TSPY F+Q+W N+ D D   + K  T+L   EID +     +   +   +K 
Sbjct: 240 NVWLDARYTSPYKFYQFWLNVSDEDAERYIKIFTSLTKEEIDALIAEHKEAPHLRVLQKR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDEVS 347
           +A E+T MVH  E+   A  A+   F  +                 + +P   ++K E+ 
Sbjct: 300 LAREVTVMVHSEEDYNAAVEASGILFGNATSDALKRLDEDTLLSVFEGVPQFEVAKSEIE 359

Query: 348 RGMGLLTLIV-KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+  + L V KA    S  E R+  +   + +N   ++     I   D      + +  
Sbjct: 360 AGIKAVDLFVEKAAIFPSKGEMRKMTQGGGVSLNKEKLTAFDQVITADDLLDEKYLLVQR 419

Query: 407 GKKNHII 413
           GKKN+ +
Sbjct: 420 GKKNYYL 426


>gi|157834045|pdb|1TYC|A Chain A, Structural Analysis Of A Series Of Mutants Of Tyrosyl-Trna
           Synthetase: Enhancement Of Catalysis By Hydrophobic
           Interactions
          Length = 319

 Score =  262 bits (670), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 135/316 (42%), Positives = 193/316 (61%), Gaps = 5/316 (1%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D L+ L  RG ++Q ++   L  L ++  VT Y G+D TA SLH GHL  ++ +   Q+ 
Sbjct: 2   DLLAELQWRGLVNQTTDEDGLRKLLNEERVTLYCGFDPTADSLHIGHLAPILTMRRFQQA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI+L+GG T +IGDPS +   R +   + ++    +IK     F+ +      A + 
Sbjct: 62  GHRPIALVGGATGLIGDPSGKKSERTLNAKETVEAWSARIKEQLGRFLDFEADGNPAKIK 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W+  +  I  LR++G  FSVN M++ ESV+SR+  E  +SF EF+YM+LQAYDF+ 
Sbjct: 122 NNYDWIGPLDVITFLRDVGKHFSVNYMMAKESVQSRI--ETGISFTEFSYMMLQAYDFLR 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASGTKMGKTLSGAI 245
           L +   CRLQ+GGSDQWGNI  G++L  + K   + F LT PL+T A GTK GKT SG I
Sbjct: 180 LYETEGCRLQIGGSDQWGNITAGLELIRKTKGEARAFGLTIPLVTKADGTKFGKTESGTI 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIA 303
           WL+KE TSPY F+Q+W N DD DV+ + K  T L   EI+ + +   +  E   A+K +A
Sbjct: 240 WLDKEKTSPYEFYQFWINTDDRDVIRYLKYFTFLSKEEIEALEQELREAPEKRAAQKTLA 299

Query: 304 TEITTMVHGREEAEKA 319
            E+T +VHG E   +A
Sbjct: 300 EEVTKLVHGEEALRQA 315


>gi|494688|pdb|1TYA|E Chain E, Structural Analysis Of A Series Of Mutants Of Tyrosyl-Trna
           Synthetase: Enhancement Of Catalysis By Hydrophobic
           Interactions
          Length = 319

 Score =  262 bits (670), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 135/316 (42%), Positives = 193/316 (61%), Gaps = 5/316 (1%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D L+ L  RG ++Q ++   L  L ++  VT Y G+D TA SLH GHL  ++ +   Q+ 
Sbjct: 2   DLLAELQWRGLVNQTTDEDGLRKLLNEERVTLYCGFDPTADSLHIGHLAAILTMRRFQQA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI+L+GG T +IGDPS +   R +   + ++    +IK     F+ +      A + 
Sbjct: 62  GHRPIALVGGATGLIGDPSGKKSERTLNAKETVEAWSARIKEQLGRFLDFEADGNPAKIK 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W+  +  I  LR++G  FSVN M++ ESV+SR+  E  +SF EF+YM+LQAYDF+ 
Sbjct: 122 NNYDWIGPLDVITFLRDVGKHFSVNYMMAKESVQSRI--ETGISFTEFSYMMLQAYDFLR 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASGTKMGKTLSGAI 245
           L +   CRLQ+GGSDQWGNI  G++L  + K   + F LT PL+T A GTK GKT SG I
Sbjct: 180 LYETEGCRLQIGGSDQWGNITAGLELIRKTKGEARAFGLTIPLVTKADGTKFGKTESGTI 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIA 303
           WL+KE TSPY F+Q+W N DD DV+ + K  T L   EI+ + +   +  E   A+K +A
Sbjct: 240 WLDKEKTSPYEFYQFWINTDDRDVIRYLKYFTFLSKEEIEALEQELREAPEKRAAQKTLA 299

Query: 304 TEITTMVHGREEAEKA 319
            E+T +VHG E   +A
Sbjct: 300 EEVTKLVHGEEALRQA 315


>gi|46907828|ref|YP_014217.1| tyrosyl-tRNA synthetase [Listeria monocytogenes serotype 4b str.
           F2365]
 gi|47093460|ref|ZP_00231224.1| tyrosyl-tRNA synthetase [Listeria monocytogenes str. 4b H7858]
 gi|254931537|ref|ZP_05264896.1| tyrosyl-tRNA synthetase [Listeria monocytogenes HPB2262]
 gi|254993889|ref|ZP_05276079.1| tyrosyl-tRNA synthetase [Listeria monocytogenes FSL J2-064]
 gi|81403260|sp|Q71Z70|SYY_LISMF RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|46881097|gb|AAT04394.1| tyrosyl-tRNA synthetase [Listeria monocytogenes serotype 4b str.
           F2365]
 gi|47018188|gb|EAL08957.1| tyrosyl-tRNA synthetase [Listeria monocytogenes str. 4b H7858]
 gi|293583092|gb|EFF95124.1| tyrosyl-tRNA synthetase [Listeria monocytogenes HPB2262]
 gi|328464964|gb|EGF36243.1| tyrosyl-tRNA synthetase [Listeria monocytogenes 1816]
          Length = 419

 Score =  262 bits (670), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 151/386 (39%), Positives = 210/386 (54%), Gaps = 27/386 (6%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I+Q ++   L     +  ++ Y G D +  S+H GHL   M+L   Q  GH+PI
Sbjct: 7   LEWRGAIYQQTDEEGLRKWVEEKQISLYCGIDPSGDSMHIGHLIPFMILRRFQNAGHRPI 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+GG T  IGDPS + E R++   ++I +N+E ++        +  G + A M+NN  W
Sbjct: 67  ILVGGATGTIGDPSGKKEERKLQSMEQISKNVESLRVQLGKIFDF-EGNSAASMVNNYDW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
              +  +D LR+ G  F+VN MLS + V SRL  E  +SF EF Y ILQA DF  L +  
Sbjct: 126 TKDVSILDFLRDYGKEFNVNTMLSKDIVASRL--EVGISFTEFAYQILQAMDFNHLYEFN 183

Query: 192 DCRLQMGGSDQWGNIICGIDL--GERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
           DCRLQ+GGSDQWGNI  G+DL   ++ +  K F LT PLLT A GTK GK+  GAIWLN 
Sbjct: 184 DCRLQIGGSDQWGNITAGLDLIRKKQGENAKAFGLTIPLLTKADGTKFGKSEGGAIWLNP 243

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE--INEAKKIIATEIT 307
           E T+PY F+Q+W N DD DVV + K  T L  +EID +AK    E  +  A+K +A E+T
Sbjct: 244 EKTTPYEFYQFWINTDDRDVVKYLKYFTFLTEAEIDELAKQVETEPHLRAAQKTLAAEMT 303

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGM-------------GLLT 354
             VH  E  E+A   +   F   +        +++ DE+ +G               L+ 
Sbjct: 304 KFVHSEEALEQALKISKALFSGDVK-------ALTADEIEQGFKDVPTFVAEDTEANLVD 356

Query: 355 LIVKAGFATSTNEARRHLKSNAIKIN 380
            +V  G   S  +AR  + + AI IN
Sbjct: 357 WLVTLGIEPSKRQAREDVANGAIYIN 382


>gi|328474831|gb|EGF45635.1| tyrosyl-tRNA synthetase [Listeria monocytogenes 220]
          Length = 405

 Score =  262 bits (670), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 151/386 (39%), Positives = 210/386 (54%), Gaps = 27/386 (6%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I+Q ++   L     +  ++ Y G D +  S+H GHL   M+L   Q  GH+PI
Sbjct: 7   LEWRGAIYQQTDEEGLRKWVEEKQISLYCGIDPSGDSMHIGHLIPFMILRRFQNAGHRPI 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+GG T  IGDPS + E R++   ++I +N+E ++        +  G + A M+NN  W
Sbjct: 67  ILVGGATGTIGDPSGKKEERKLQSMEQISKNVESLRVQLGKIFDF-EGNSAASMVNNYDW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
              +  +D LR+ G  F+VN MLS + V SRL  E  +SF EF Y ILQA DF  L +  
Sbjct: 126 TKDVSILDFLRDYGKEFNVNTMLSKDIVASRL--EVGISFTEFAYQILQAMDFNHLYEFN 183

Query: 192 DCRLQMGGSDQWGNIICGIDL--GERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
           DCRLQ+GGSDQWGNI  G+DL   ++ +  K F LT PLLT A GTK GK+  GAIWLN 
Sbjct: 184 DCRLQIGGSDQWGNITAGLDLIRKKQGENAKAFGLTIPLLTKADGTKFGKSEGGAIWLNP 243

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE--INEAKKIIATEIT 307
           E T+PY F+Q+W N DD DVV + K  T L  +EID +AK    E  +  A+K +A E+T
Sbjct: 244 EKTTPYEFYQFWINTDDRDVVKYLKYFTFLTEAEIDELAKQVETEPHLRAAQKTLAAEMT 303

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGM-------------GLLT 354
             VH  E  E+A   +   F   +        +++ DE+ +G               L+ 
Sbjct: 304 KFVHSEEALEQALKISKALFSGDVK-------ALTADEIEQGFKDVPTFVAEDTEANLVD 356

Query: 355 LIVKAGFATSTNEARRHLKSNAIKIN 380
            +V  G   S  +AR  + + AI IN
Sbjct: 357 WLVTLGIEPSKRQAREDVANGAIYIN 382


>gi|317154791|ref|YP_004122839.1| tyrosyl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2]
 gi|316945042|gb|ADU64093.1| tyrosyl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2]
          Length = 427

 Score =  262 bits (670), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 148/394 (37%), Positives = 221/394 (56%), Gaps = 18/394 (4%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I+Q+S+  ++    S      Y G+D TA SLH G+L  L+ L  +++ GH PI
Sbjct: 7   LKWRGLINQVSDEEKVRTYLSNQGAVMYCGFDPTAESLHVGNLVPLLCLARMKRAGHNPI 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+GG T +IGDPS +D+ R + R +++    EKIKG    F +  TG    +  NN  W
Sbjct: 67  FLLGGATGLIGDPSGKDKERELSRREDLDVRSEKIKGQVRRFFERNTGDRPEIT-NNYIW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYDFVELAKN 190
              +  I+LLR++G +F+VN ML  ESV+ R+ R+   +S+ EF+YMILQ YD+  L K 
Sbjct: 126 TKDLTAIELLRDVGKYFTVNWMLQKESVKGRIDRDDVGISYTEFSYMILQGYDYYHLFKT 185

Query: 191 YDCRLQMGGSDQWGNIICGIDL------GERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             CRLQ+GG DQWGNI  G +L       E  +  ++FALT PL+TTASG K GK+  GA
Sbjct: 186 KGCRLQLGGGDQWGNITAGCELVRKKCAQEDGEQEEVFALTFPLITTASGKKFGKSEKGA 245

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKII 302
           I+LN ++T PY F+Q++ N DD DV+ F K  T L   EI+ + +   +   +  A+K +
Sbjct: 246 IFLNPDITPPYAFYQFFINTDDRDVIKFLKLFTFLDQDEINALERELAEAPHLRSAQKRL 305

Query: 303 ATEITTMVHGREEAEK--AATAA------MECFDMSIHSQHMPTISISKDEVSRGMGLLT 354
           A E+T MVHG+ E ++  AAT A      ++  D +     + T        S    L  
Sbjct: 306 AEEVTRMVHGQPELDRVMAATEALFGEGSLKGVDPATLRAALETAPHCHYAPSNVPDLPQ 365

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEK 388
           +++    A S  +AR+ + S  + IN   +  ++
Sbjct: 366 MLLDLQLAASKGQARKDIASGGVYINGERVEADQ 399


>gi|16803638|ref|NP_465123.1| tyrosyl-tRNA synthetase [Listeria monocytogenes EGD-e]
 gi|224499178|ref|ZP_03667527.1| tyrosyl-tRNA synthetase [Listeria monocytogenes Finland 1988]
 gi|254824342|ref|ZP_05229343.1| tyrosyl-tRNA synthetase [Listeria monocytogenes FSL J1-194]
 gi|254832000|ref|ZP_05236655.1| tyrosyl-tRNA synthetase [Listeria monocytogenes 10403S]
 gi|255522125|ref|ZP_05389362.1| tyrosyl-tRNA synthetase [Listeria monocytogenes FSL J1-175]
 gi|81508953|sp|Q8Y6T4|SYY_LISMO RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|16411027|emb|CAC99676.1| tyrosyl-tRNA synthetase [Listeria monocytogenes EGD-e]
 gi|293593576|gb|EFG01337.1| tyrosyl-tRNA synthetase [Listeria monocytogenes FSL J1-194]
          Length = 419

 Score =  262 bits (669), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 151/386 (39%), Positives = 210/386 (54%), Gaps = 27/386 (6%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I+Q ++   L     +  ++ Y G D +  S+H GHL   M+L   Q  GH+PI
Sbjct: 7   LEWRGAIYQQTDEEGLRKWVEEKQISLYCGIDPSGDSMHIGHLIPFMILRRFQNAGHRPI 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+GG T  IGDPS + E R++   ++I +N+E ++        +  G + A M+NN  W
Sbjct: 67  ILVGGATGTIGDPSGKKEERKLQSMEQISKNVESLRVQLGKIFDF-EGNSAASMVNNYDW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
              +  +D LR+ G  F+VN MLS + V SRL  E  +SF EF Y ILQA DF  L +  
Sbjct: 126 TKDVSILDFLRDYGKEFNVNTMLSKDIVASRL--EVGISFTEFAYQILQAMDFNHLYEFN 183

Query: 192 DCRLQMGGSDQWGNIICGIDL--GERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
           DCRLQ+GGSDQWGNI  G+DL   ++ +  K F LT PLLT A GTK GK+  GAIWLN 
Sbjct: 184 DCRLQIGGSDQWGNITAGLDLIRKKQGENAKAFGLTIPLLTKADGTKFGKSEGGAIWLNP 243

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE--INEAKKIIATEIT 307
           E T+PY F+Q+W N DD DVV + K  T L  +EID +AK    E  +  A+K +A E+T
Sbjct: 244 EKTTPYEFYQFWINTDDRDVVKYLKYFTFLTEAEIDELAKQVETEPHLRAAQKTLAAEMT 303

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGM-------------GLLT 354
             VH  E  E+A   +   F   +        +++ DE+ +G               L+ 
Sbjct: 304 KFVHSEEALEQALKISKALFSGDVK-------ALTADEIEQGFKDVPTFVAEDSEANLVD 356

Query: 355 LIVKAGFATSTNEARRHLKSNAIKIN 380
            +V  G   S  +AR  + + AI IN
Sbjct: 357 WLVTLGIEPSKRQAREDVGNGAIYIN 382


>gi|225867704|ref|YP_002743652.1| tyrosyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus]
 gi|259517026|sp|C0MEE0|SYY_STRS7 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|225700980|emb|CAW97715.1| putative tyrosyl-tRNA synthetase [Streptococcus equi subsp.
           zooepidemicus]
          Length = 418

 Score =  262 bits (669), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 137/384 (35%), Positives = 214/384 (55%), Gaps = 11/384 (2%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG + Q ++   L    ++G V+ Y GYD TA SLH GHL  ++    LQ  GHKP 
Sbjct: 7   LKARGLVFQTTDEEALVKALTEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAGHKPY 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+D  R +   + + +  +KIK   S F+ +  G+  A ++NN  W
Sbjct: 67  ALVGGATGLIGDPSFKDAERILQTKETVLDWSQKIKEQLSCFLDFDNGENKAELVNNYDW 126

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
              I +ID LR++G  F+VN M+S +SV+ R+  E  +S+ EF Y ++Q YDF EL   +
Sbjct: 127 FSQISFIDFLRDVGKHFTVNYMMSKDSVKKRI--ETGISYTEFAYQVMQGYDFYELNAKH 184

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
           +  LQ+GGSDQWGN+  G +L  +        +T PL+T A+G K GK+   AIWL+ + 
Sbjct: 185 NVTLQIGGSDQWGNMTAGTELLRKKADKTGHVMTVPLITDATGKKFGKSEGNAIWLDAKK 244

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATEITTM 309
           TSPY  +Q+W N+ D D V F K  T L + EI  + +      +E  A+K +A E+ T+
Sbjct: 245 TSPYEMYQFWLNVMDDDAVRFLKIFTFLSLDEIAAIEEQFNAARHERLAQKTLAREVVTL 304

Query: 310 VHGREEAEKAATAAMECFDMSIHS-------QHMPTISISKDEVSRGMGLLTLIVKAGFA 362
           VHG    ++A     + F  +I +       Q +  +   + +    + ++ ++V AG +
Sbjct: 305 VHGEAAYQQALNITEQLFAGAIKNLSAAELKQGLSNVPNYQVQAEDSLNIVDMLVTAGIS 364

Query: 363 TSTNEARRHLKSNAIKINNSIISN 386
            S  +AR  L++ AI +N   + N
Sbjct: 365 PSKRQAREDLQNGAIYLNGERLQN 388


>gi|231099|pdb|4TS1|A Chain A, Crystal Structure Of A Deletion Mutant Of A Tyrosyl-TRNA
           Synthetase Complexed With Tyrosine
 gi|231101|pdb|4TS1|B Chain B, Crystal Structure Of A Deletion Mutant Of A Tyrosyl-TRNA
           Synthetase Complexed With Tyrosine
          Length = 319

 Score =  262 bits (669), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 135/316 (42%), Positives = 193/316 (61%), Gaps = 5/316 (1%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D L+ L  RG ++Q ++   L  L ++  VT Y G+D TA SLH GHL  ++ +   Q+ 
Sbjct: 2   DLLAELQWRGLVNQTTDEDGLRKLLNEERVTLYCGFDPTADSLHIGHLATILTMRRFQQA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI+L+GG T +IGDPS +   R +   + ++    +IK     F+ +      A + 
Sbjct: 62  GHRPIALVGGATGLIGDPSGKKSERTLNAKETVEAWSARIKEQLGRFLDFEADGNPAKIK 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W+  +  I  LR++G  FSVN M++ ESV+SR+  E  +SF EF+YM+LQAYDF+ 
Sbjct: 122 NNYDWIGPLDVITFLRDVGKHFSVNYMMAKESVQSRI--ETGISFTEFSYMMLQAYDFLR 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASGTKMGKTLSGAI 245
           L +   CRLQ+GGSDQWGNI  G++L  + K   + F LT PL+T A GTK GKT SG I
Sbjct: 180 LYETEGCRLQIGGSDQWGNITAGLELIRKTKGEARAFGLTIPLVTKADGTKFGKTESGTI 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIA 303
           WL+KE TSPY F+Q+W N DD DV+ + K  T L   EI+ + +   +  E   A+K +A
Sbjct: 240 WLDKEKTSPYEFYQFWINTDDRDVIRYLKYFTFLSKEEIEALEQELREAPEKRAAQKTLA 299

Query: 304 TEITTMVHGREEAEKA 319
            E+T +VHG E   +A
Sbjct: 300 EEVTKLVHGEEALRQA 315


>gi|256832352|ref|YP_003161079.1| tyrosyl-tRNA synthetase [Jonesia denitrificans DSM 20603]
 gi|256685883|gb|ACV08776.1| tyrosyl-tRNA synthetase [Jonesia denitrificans DSM 20603]
          Length = 422

 Score =  262 bits (669), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 142/390 (36%), Positives = 224/390 (57%), Gaps = 12/390 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           ++ L  L  RG + Q ++   L      G VT Y G+D TA SLH GHL QL++L  LQ+
Sbjct: 2   TNVLDELQWRGLVSQTTDIDALRAAFENGPVTYYCGFDPTAPSLHHGHLVQLVVLKHLQR 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN-IEKIKGIFSSFIKYGTGKTDAL 124
            GH+PI+L+GG T +IGDP    E  R++ S+E+    +E+++     F+ +  G+  A+
Sbjct: 62  AGHRPIALVGGATGLIGDPRMSGE--RVLNSKEVVAGWVERLRSQIERFLDF-EGENAAM 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M+NN  W   +  +D LR++G  + +  ML+ ++V  RL  ++ +SF EF+Y ILQ  DF
Sbjct: 119 MVNNLDWHGQLSALDFLRDVGKHYRLGTMLAKDTVARRLASDEGISFTEFSYQILQGMDF 178

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL + Y C LQ GG+DQWGN++ G++L  +     + ALT+PL+T A GTK GK+  GA
Sbjct: 179 LELNRRYGCTLQTGGNDQWGNLLSGVELIRKSDRVAVHALTTPLITKADGTKFGKSEGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKII 302
           +WL+  M SPY F+Q+W N DD DV+ + K  T     +I+ + +   +  +  EA+K +
Sbjct: 239 VWLDPAMMSPYAFYQFWVNSDDRDVIGWLKTFTFRSRQDIEALEQSLEERPQAREAQKAL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECF------DMSIHSQHMPTISISKDEVSRGMGLLTLI 356
           A ++T MVHG   A++A  A+   F      D++  +    T  +    +S G  ++  +
Sbjct: 299 AFDVTAMVHGERAAQQAIAASAALFGRGAFEDLAESTLVAVTAELDIATISVGSPVVDAL 358

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISN 386
           V+AG   S   ARR +      INN  +S+
Sbjct: 359 VEAGLVQSKAAARRAITEGGASINNVRVSD 388


>gi|195977257|ref|YP_002122501.1| tyrosyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus
           MGCS10565]
 gi|254783639|sp|B4U045|SYY_STREM RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|195973962|gb|ACG61488.1| tyrosyl-tRNA synthetase TyrS [Streptococcus equi subsp.
           zooepidemicus MGCS10565]
          Length = 418

 Score =  262 bits (669), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 140/395 (35%), Positives = 217/395 (54%), Gaps = 20/395 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG + Q ++   L    ++G V+ Y GYD TA SLH GHL  ++    LQ  GHKP 
Sbjct: 7   LKARGLVFQTTDEEALVKALTEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAGHKPY 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+D  R +   + + +  +KIK   S F+ +  G+  A ++NN  W
Sbjct: 67  ALVGGATGLIGDPSFKDAERILQTKETVLDWSQKIKEQLSCFLDFDNGENKAELVNNYDW 126

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
              I +ID LR++G  F+VN M+S +SV+ R+  E  +S+ EF Y ++Q YDF EL   +
Sbjct: 127 FSQISFIDFLRDVGKHFTVNYMMSKDSVKKRI--ETGISYTEFAYQVMQGYDFYELNAKH 184

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
           +  LQ+GGSDQWGN+  G +L  +        +T PL+T A+G K GK+   AIWL+ + 
Sbjct: 185 NVTLQIGGSDQWGNMTAGTELLRKKADKTGHVMTVPLITDATGKKFGKSEGNAIWLDAKK 244

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATEITTM 309
           TSPY  +Q+W N+ D D V F K  T L + EI  + +      +E  A+K +A E+ T+
Sbjct: 245 TSPYEMYQFWLNVMDDDAVRFLKIFTFLSLDEIAAIEEQFNAARHERLAQKTLAREVVTL 304

Query: 310 VHGREEAEKAATAAMECFDMSIHS-------QHMPTISISKDEVSRGMGLLTLIVKAGFA 362
           VHG    ++A     + F  +I +       Q +  +   + +    + ++ ++V AG +
Sbjct: 305 VHGEAAYQQALNITEQLFAGAIKNLSAAELKQGLSNVPNYQVQAEDSLNIVDMLVTAGIS 364

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
            S  +AR  L++ AI +N           +LQD D
Sbjct: 365 PSKRQAREDLQNGAIYLNGE---------RLQDLD 390


>gi|217964249|ref|YP_002349927.1| tyrosyl-tRNA synthetase [Listeria monocytogenes HCC23]
 gi|290893192|ref|ZP_06556179.1| tyrosyl-tRNA synthetase [Listeria monocytogenes FSL J2-071]
 gi|254783615|sp|B8DHE4|SYY_LISMH RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|217333519|gb|ACK39313.1| tyrosyl-tRNA synthetase [Listeria monocytogenes HCC23]
 gi|290557174|gb|EFD90701.1| tyrosyl-tRNA synthetase [Listeria monocytogenes FSL J2-071]
 gi|307571183|emb|CAR84362.1| tyrS [Listeria monocytogenes L99]
          Length = 419

 Score =  262 bits (669), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 151/386 (39%), Positives = 210/386 (54%), Gaps = 27/386 (6%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I+Q ++   L     +  ++ Y G D +  S+H GHL   M+L   Q  GH+PI
Sbjct: 7   LEWRGAIYQQTDEEGLRKWVDEKQISLYCGIDPSGDSMHIGHLIPFMILRRFQNAGHRPI 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+GG T  IGDPS + E R++   ++I +N+E ++        +  G + A M+NN  W
Sbjct: 67  ILVGGATGTIGDPSGKKEERKLQSMEQISKNVESLRVQLGKIFDF-EGDSAASMVNNYDW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
              +  +D LR+ G  F+VN MLS + V SRL  E  +SF EF Y ILQA DF  L +  
Sbjct: 126 TKDVSILDFLRDYGKEFNVNTMLSKDIVASRL--EVGISFTEFAYQILQAMDFNHLYEFN 183

Query: 192 DCRLQMGGSDQWGNIICGIDL--GERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
           DCRLQ+GGSDQWGNI  G+DL   ++ +  K F LT PLLT A GTK GK+  GAIWLN 
Sbjct: 184 DCRLQIGGSDQWGNITAGLDLIRKKQGENAKAFGLTIPLLTKADGTKFGKSEGGAIWLNP 243

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE--INEAKKIIATEIT 307
           E T+PY F+Q+W N DD DVV + K  T L  +EID +AK    E  +  A+K +A E+T
Sbjct: 244 EKTTPYEFYQFWINTDDRDVVKYLKYFTFLTEAEIDELAKQVETEPHLRAAQKTLAAEMT 303

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGM-------------GLLT 354
             VH  E  E+A   +   F   +        +++ DE+ +G               L+ 
Sbjct: 304 KFVHSEEALEQALKISKALFSGDVK-------ALTADEIEQGFKDVPTFVAEDSEANLVD 356

Query: 355 LIVKAGFATSTNEARRHLKSNAIKIN 380
            +V  G   S  +AR  + + AI IN
Sbjct: 357 WLVTLGIEPSKRQAREDVGNGAIYIN 382


>gi|226224199|ref|YP_002758306.1| tyrosyl-tRNA synthetase [Listeria monocytogenes Clip81459]
 gi|254852220|ref|ZP_05241568.1| tyrosyl-tRNA synthetase [Listeria monocytogenes FSL R2-503]
 gi|300765976|ref|ZP_07075947.1| tyrosyl-tRNA synthetase [Listeria monocytogenes FSL N1-017]
 gi|259517006|sp|C1KVP5|SYY_LISMC RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|225876661|emb|CAS05370.1| tyrosyl-tRNA synthetase [Listeria monocytogenes serotype 4b str.
           CLIP 80459]
 gi|258605528|gb|EEW18136.1| tyrosyl-tRNA synthetase [Listeria monocytogenes FSL R2-503]
 gi|300513294|gb|EFK40370.1| tyrosyl-tRNA synthetase [Listeria monocytogenes FSL N1-017]
          Length = 419

 Score =  262 bits (669), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 151/386 (39%), Positives = 210/386 (54%), Gaps = 27/386 (6%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I+Q ++   L     +  ++ Y G D +  S+H GHL   M+L   Q  GH+PI
Sbjct: 7   LEWRGAIYQQTDEEGLRKWVEEKQISLYCGIDPSGDSMHIGHLIPFMILRRFQNAGHRPI 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+GG T  IGDPS + E R++   ++I +N+E ++        +  G + A M+NN  W
Sbjct: 67  ILVGGATGTIGDPSGKKEERKLQSMEQISKNVESLRVQLGKIFDF-EGNSAASMVNNYDW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
              +  +D LR+ G  F+VN MLS + V SRL  E  +SF EF Y ILQA DF  L +  
Sbjct: 126 TKDVSILDFLRDYGKEFNVNTMLSKDIVASRL--EVGISFTEFAYQILQAMDFNHLYEFN 183

Query: 192 DCRLQMGGSDQWGNIICGIDL--GERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
           DCRLQ+GGSDQWGNI  G+DL   ++ +  K F LT PLLT A GTK GK+  GAIWLN 
Sbjct: 184 DCRLQIGGSDQWGNITAGLDLIRKKQGENAKAFGLTIPLLTKADGTKFGKSEGGAIWLNP 243

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE--INEAKKIIATEIT 307
           E T+PY F+Q+W N DD DVV + K  T L  +EID +AK    E  +  A+K +A E+T
Sbjct: 244 EKTTPYEFYQFWINTDDRDVVKYLKYFTFLTEAEIDELAKQVETEPHLRAAQKTLAAEMT 303

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGM-------------GLLT 354
             VH  E  E+A   +   F   +        +++ DE+ +G               L+ 
Sbjct: 304 KFVHSEEALEQALKISKALFSGDVK-------ALTADEIEQGFKDVPTFVAEDTEANLVD 356

Query: 355 LIVKAGFATSTNEARRHLKSNAIKIN 380
            +V  G   S  +AR  + + AI IN
Sbjct: 357 WLVTLGIEPSKRQAREDVGNGAIYIN 382


>gi|494690|pdb|1TYB|E Chain E, Structural Analysis Of A Series Of Mutants Of Tyrosyl-Trna
           Synthetase: Enhancement Of Catalysis By Hydrophobic
           Interactions
          Length = 319

 Score =  262 bits (669), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 135/316 (42%), Positives = 193/316 (61%), Gaps = 5/316 (1%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D L+ L  RG ++Q ++   L  L ++  VT Y G+D TA SLH GHL  ++ +   Q+ 
Sbjct: 2   DLLAELQWRGLVNQTTDEDGLRKLLNEERVTLYCGFDPTADSLHIGHLAGILTMRRFQQA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI+L+GG T +IGDPS +   R +   + ++    +IK     F+ +      A + 
Sbjct: 62  GHRPIALVGGATGLIGDPSGKKSERTLNAKETVEAWSARIKEQLGRFLDFEADGNPAKIK 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W+  +  I  LR++G  FSVN M++ ESV+SR+  E  +SF EF+YM+LQAYDF+ 
Sbjct: 122 NNYDWIGPLDVITFLRDVGKHFSVNYMMAKESVQSRI--ETGISFTEFSYMMLQAYDFLR 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASGTKMGKTLSGAI 245
           L +   CRLQ+GGSDQWGNI  G++L  + K   + F LT PL+T A GTK GKT SG I
Sbjct: 180 LYETEGCRLQIGGSDQWGNITAGLELIRKTKGEARAFGLTIPLVTKADGTKFGKTESGTI 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIA 303
           WL+KE TSPY F+Q+W N DD DV+ + K  T L   EI+ + +   +  E   A+K +A
Sbjct: 240 WLDKEKTSPYEFYQFWINTDDRDVIRYLKYFTFLSKEEIEALEQELREAPEKRAAQKTLA 299

Query: 304 TEITTMVHGREEAEKA 319
            E+T +VHG E   +A
Sbjct: 300 EEVTKLVHGEEALRQA 315


>gi|21220307|ref|NP_626086.1| tyrosyl-tRNA synthetase [Streptomyces coelicolor A3(2)]
 gi|81550098|sp|Q9RJ50|SYY_STRCO RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|6117861|emb|CAB59434.1| tyrosyl-tRNA synthetase (EC 6.1.1.1) [Streptomyces coelicolor
           A3(2)]
          Length = 422

 Score =  262 bits (669), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 148/424 (34%), Positives = 237/424 (55%), Gaps = 15/424 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +D +  L  RG   Q ++   L    + G VT Y G+D TA SLH GHL Q++ +  LQ+
Sbjct: 2   TDIVDELKWRGLFAQSTDEDALRKALADGPVTFYCGFDPTAPSLHVGHLVQVLTVRRLQQ 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQE-IQENIEKIKGIFSSFIKYGTGKTDAL 124
            GH+P++L+GG T  IGDP  R  + R + S E +   +E+++G    F+ +  G+  A+
Sbjct: 62  AGHRPLALVGGATGQIGDP--RPTAERTLNSPETVAGWVERLRGQIEPFLSF-EGENAAV 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M+NN  W   +  I+ LR+IG  F VN+ML+ +SV  RL+  + +S+ EF+Y +LQA DF
Sbjct: 119 MVNNLDWTEGLSAIEFLRDIGKHFRVNKMLTKDSVARRLESSEGISYTEFSYQLLQAMDF 178

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT-PKLFALTSPLLTTASGTKMGKTLSG 243
           ++L + Y C +Q GGSDQWGN+  G+DL  RL+    + A  +PL+T A GTK GKT  G
Sbjct: 179 LQLYRRYGCTMQQGGSDQWGNLTAGLDLLHRLEPDASVHAYATPLMTKADGTKFGKTEGG 238

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE---INEAKK 300
           A+WL+ EMT+PY F+Q+W N+DD D+ ++ + L+    +E++ + + Q +E      A++
Sbjct: 239 AVWLDPEMTTPYAFYQFWLNVDDRDISTYMRILSFRSRAELEELER-QTEERPQARAAQR 297

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMS-IHSQHMPTISISKDE-----VSRGMGLLT 354
            +A E+TT+VHG  +      A+   F    +      T++ +  E     V+    ++ 
Sbjct: 298 ALAEELTTLVHGAGQTAAVIAASKALFGQGELAELDEATLAAALSELPHVRVAEPAPVVD 357

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           L  + G   S + ARR +K     +NN+ ++ E      +D      + L  GKKN    
Sbjct: 358 LFAEVGLVASKSAARRTVKEGGAYVNNAKVTGEDAVPAKEDLLHGRWLVLRRGKKNLAAV 417

Query: 415 HLCG 418
            + G
Sbjct: 418 EITG 421


>gi|119475789|ref|ZP_01616142.1| tyrosyl-tRNA synthetase [marine gamma proteobacterium HTCC2143]
 gi|119451992|gb|EAW33225.1| tyrosyl-tRNA synthetase [marine gamma proteobacterium HTCC2143]
          Length = 435

 Score =  261 bits (668), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 141/402 (35%), Positives = 231/402 (57%), Gaps = 20/402 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L  RG I Q +  +EL+   +    T Y G+D TA SLH G L  L+ L   Q+ G
Sbjct: 8   LLDDLRSRGLIAQATAEQELEDHLTGACRTLYCGFDPTADSLHIGSLVPLLTLRRFQQAG 67

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKP++L+GG T +IGDPSF+ E R++     + + +EK+K     +I +  G + A ++N
Sbjct: 68  HKPLALVGGATGLIGDPSFKAEERKLNTPDVVSDWVEKLKAQVGRYIDFDCGDSSADVVN 127

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDFVE 186
           N  W+  +  +  LR+IG  F VN+M+  ESV+ R+ R+   +S+ EF+YM+LQ+ DF E
Sbjct: 128 NLDWVGEMDVLSFLRDIGKHFPVNQMIKKESVKQRIDRDGDGISYTEFSYMVLQSLDFSE 187

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L  +  C LQ+GGSDQWGNI  G++L  R    +++ LT PL+T A GTK GK+ +G IW
Sbjct: 188 LFHSRHCTLQIGGSDQWGNITGGVELSRRRFGGQVYGLTLPLVTKADGTKFGKSETGTIW 247

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM----AKLQGKEINEAKKII 302
           L+   TSPY F+Q+W N  DAD   F +  T L + +I  +    AK +G+   +  +++
Sbjct: 248 LDPAKTSPYAFYQFWLNTADADAYRFLRYFTFLSVDQIAGIEQEDAKAEGRPTGQ--RVL 305

Query: 303 ATEITTMVHGRE--EAEKAATAAMECFDMSIHSQH---------MPTISISKDEVSRGMG 351
           A E+T +VHG E   A +  ++++   D+S  S+          +P+ ++ + +  +G+ 
Sbjct: 306 AEEVTRLVHGDEGLSAARRISSSLFSGDLSEMSESDFRQLRLDGLPSSTLERSDF-KGLS 364

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINN-SIISNEKLQIK 392
           L  ++  +G A S  + +  L   ++ IN  S+ S++ + ++
Sbjct: 365 LTQILTDSGMAASGKQVKDALGRRSVLINGVSVGSDDNMNVE 406


>gi|218458814|ref|ZP_03498905.1| tyrosyl-tRNA synthetase [Rhizobium etli Kim 5]
          Length = 198

 Score =  261 bits (668), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 122/189 (64%), Positives = 151/189 (79%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  FKSDFL  L ERGFIHQIS+ R LD L ++  VTAYIGYD TASSLH GHLTQ+M+L
Sbjct: 1   MSEFKSDFLRTLKERGFIHQISDERGLDDLFAKETVTAYIGYDPTASSLHVGHLTQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            WLQ TGH+PISLMGGGT ++GDPSF++E+R++M  + I++NI  IK  FS+++ Y    
Sbjct: 61  HWLQATGHRPISLMGGGTGMVGDPSFKEEARKLMTIETIEQNIASIKSCFSNYLDYDKPG 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
             ALM+NN  WL S+ Y++ LR++G  FSVNRMLSF+SV++RL REQSLSFLEFNYMILQ
Sbjct: 121 NAALMINNAEWLRSLNYLEFLRDVGRHFSVNRMLSFDSVKTRLDREQSLSFLEFNYMILQ 180

Query: 181 AYDFVELAK 189
           AYDFVELA+
Sbjct: 181 AYDFVELAQ 189


>gi|255026892|ref|ZP_05298878.1| tyrosyl-tRNA synthetase [Listeria monocytogenes FSL J2-003]
          Length = 419

 Score =  261 bits (668), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 151/386 (39%), Positives = 210/386 (54%), Gaps = 27/386 (6%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I+Q ++   L     +  ++ Y G D +  S+H GHL   M+L   Q  GH+PI
Sbjct: 7   LEWRGAIYQQTDEEGLRKWVDEKQISLYCGIDPSGDSMHIGHLIPFMILRRFQNAGHRPI 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+GG T  IGDPS + E R++   ++I +N+E ++        +  G + A M+NN  W
Sbjct: 67  ILVGGATGTIGDPSGKKEERQLQSMEQISKNVESLRVQLGKIFDF-EGNSAASMVNNYDW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
              +  +D LR+ G  F+VN MLS + V SRL  E  +SF EF Y ILQA DF  L +  
Sbjct: 126 TKDVSILDFLRDYGKEFNVNTMLSKDIVASRL--EVGISFTEFAYQILQAMDFNHLYEFN 183

Query: 192 DCRLQMGGSDQWGNIICGIDL--GERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
           DCRLQ+GGSDQWGNI  G+DL   ++ +  K F LT PLLT A GTK GK+  GAIWLN 
Sbjct: 184 DCRLQIGGSDQWGNITAGLDLIRKKQGENAKAFGLTIPLLTKADGTKFGKSEGGAIWLNP 243

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE--INEAKKIIATEIT 307
           E T+PY F+Q+W N DD DVV + K  T L  +EID +AK    E  +  A+K +A E+T
Sbjct: 244 EKTTPYEFYQFWINTDDRDVVKYLKYFTFLTEAEIDELAKQVETEPHLRAAQKTLAAEMT 303

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGM-------------GLLT 354
             VH  E  E+A   +   F   +        +++ DE+ +G               L+ 
Sbjct: 304 KFVHSEEALEQALKISKALFSGDVK-------ALTADEIEQGFKDVPTFVAEDSEANLVD 356

Query: 355 LIVKAGFATSTNEARRHLKSNAIKIN 380
            +V  G   S  +AR  + + AI IN
Sbjct: 357 WLVTLGIEPSKRQAREDVGNGAIYIN 382


>gi|330997189|ref|ZP_08321042.1| tyrosine--tRNA ligase [Paraprevotella xylaniphila YIT 11841]
 gi|329570984|gb|EGG52691.1| tyrosine--tRNA ligase [Paraprevotella xylaniphila YIT 11841]
          Length = 430

 Score =  261 bits (668), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 149/427 (34%), Positives = 232/427 (54%), Gaps = 22/427 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG IH +  P   D+L  +  VTAY+G D TA SLH GHL  +M+L   Q+ 
Sbjct: 2   NFVEELKWRGMIHTMM-PGTEDLL-EKEQVTAYLGIDPTADSLHIGHLCGVMMLKHFQRC 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD-ALM 125
           GHKP++L+GG T +IGDPS + + R ++  + ++ N+  IK   + F+ + +   + A +
Sbjct: 60  GHKPLALIGGATGMIGDPSGKSQERNLLDEETLRHNVACIKQQLARFLDFDSDAPNHAEL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQAYD 183
           +NN  W+   K++D  RE+G   +VN M++ +SV+ RL  E    LSF EF Y +LQ YD
Sbjct: 120 VNNYDWMKDFKFLDFAREVGKHITVNYMMAKDSVQKRLNGEARDGLSFTEFTYQLLQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ L ++  CRLQ+GGSDQWGNI  G +L  R    ++FAL  PL+T A GTK GKT  G
Sbjct: 180 FLYLYEHKGCRLQLGGSDQWGNITTGAELIRRTNGGEVFALVCPLVTKADGTKFGKTEKG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEA--KKI 301
            IWLN++ TSPY F+Q+W N+ D D   + +  TTL   EID +     ++  +   +K 
Sbjct: 240 NIWLNRDYTSPYAFYQFWLNVADDDAKRYIRIFTTLDKEEIDGLIAQHDEDPGQRILQKR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQ--------------HMPTISISKDEVS 347
           +A EIT MVH  E+   A  A+   F  +                   +P   +S++ +S
Sbjct: 300 LAKEITIMVHSEEDYNMAVEASNILFGKATKESLTKLDEQTLLDVFAGVPQFEVSREALS 359

Query: 348 RGMGLLTLIVKAGFA-TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+  + L  +      S  E R+ ++   + +N   ++     +   D  +   + +  
Sbjct: 360 AGVKAVDLTAEMTQCFPSKGEMRKMVQGGGVSLNKEKLTAFDRMVTTDDLLNGKYLLVQR 419

Query: 407 GKKNHII 413
           GKKN+ +
Sbjct: 420 GKKNYFL 426


>gi|224501460|ref|ZP_03669767.1| tyrosyl-tRNA synthetase [Listeria monocytogenes FSL R2-561]
          Length = 396

 Score =  261 bits (668), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 151/386 (39%), Positives = 210/386 (54%), Gaps = 27/386 (6%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I+Q ++   L     +  ++ Y G D +  S+H GHL   M+L   Q  GH+PI
Sbjct: 7   LEWRGAIYQQTDEEGLRKWVEEKQISLYCGIDPSGDSMHIGHLIPFMILRRFQNAGHRPI 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+GG T  IGDPS + E R++   ++I +N+E ++        +  G + A M+NN  W
Sbjct: 67  ILVGGATGTIGDPSGKKEERKLQSMEQISKNVESLRVQLGKIFDF-EGNSAASMVNNYDW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
              +  +D LR+ G  F+VN MLS + V SRL  E  +SF EF Y ILQA DF  L +  
Sbjct: 126 TKDVSILDFLRDYGKEFNVNTMLSKDIVASRL--EVGISFTEFAYQILQAMDFNHLYEFN 183

Query: 192 DCRLQMGGSDQWGNIICGIDL--GERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
           DCRLQ+GGSDQWGNI  G+DL   ++ +  K F LT PLLT A GTK GK+  GAIWLN 
Sbjct: 184 DCRLQIGGSDQWGNITAGLDLIRKKQGENAKAFGLTIPLLTKADGTKFGKSEGGAIWLNP 243

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE--INEAKKIIATEIT 307
           E T+PY F+Q+W N DD DVV + K  T L  +EID +AK    E  +  A+K +A E+T
Sbjct: 244 EKTTPYEFYQFWINTDDRDVVKYLKYFTFLTEAEIDELAKQVETEPHLRAAQKTLAAEMT 303

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGM-------------GLLT 354
             VH  E  E+A   +   F   +        +++ DE+ +G               L+ 
Sbjct: 304 KFVHSEEALEQALKISKALFSGDVK-------ALTADEIEQGFKDVPTFVAEDSEANLVD 356

Query: 355 LIVKAGFATSTNEARRHLKSNAIKIN 380
            +V  G   S  +AR  + + AI IN
Sbjct: 357 WLVTLGIEPSKRQAREDVGNGAIYIN 382


>gi|302533702|ref|ZP_07286044.1| tyrosyl-tRNA synthetase [Streptomyces sp. C]
 gi|302442597|gb|EFL14413.1| tyrosyl-tRNA synthetase [Streptomyces sp. C]
          Length = 422

 Score =  261 bits (668), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 144/423 (34%), Positives = 229/423 (54%), Gaps = 13/423 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +D +  L  RG   Q ++   L    + G VT Y G+D TA+SLH GHL Q++ +  LQ+
Sbjct: 2   TDIVDELKWRGLFAQSTDEEALRKAFADGPVTFYCGFDPTAASLHVGHLVQVLTVRRLQQ 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN-IEKIKGIFSSFIKYGTGKTDAL 124
            GH+P++L+GG T  IGDP  R  + R +   E   N + +++     F+ +  G+  A+
Sbjct: 62  AGHRPLALVGGATGQIGDP--RPTAERTLNDPETVANWVNRLRTQIEPFLSF-EGENAAV 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M+NN  W   +  I+ LR+IG  F VN+ML+ +SV  RL  EQ +S+ EF+Y +LQ  DF
Sbjct: 119 MVNNLDWTAGLSAIEFLRDIGKHFRVNKMLTKDSVAKRLDSEQGISYTEFSYQLLQGMDF 178

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASGTKMGKTLSG 243
           +EL + Y C LQ GGSDQWGN+  G+DL  R++    + A+ +PL+  A GTK GK+ SG
Sbjct: 179 LELYRRYGCTLQQGGSDQWGNLTAGLDLIHRVEPAAHVHAMATPLMVKADGTKFGKSESG 238

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT--TLPMSEIDRMAKLQGKEINEAKKI 301
           A+WL+ EMT+PY F+Q+W N+DD D+ ++ + L+  +    E       +  ++  A++ 
Sbjct: 239 AVWLDPEMTTPYAFYQFWLNVDDRDISTYMRILSFRSREELEELEAQTAERPQMRAAQRA 298

Query: 302 IATEITTMVHGREE------AEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTL 355
           +A E+TT+VHG ++      A KA     E  ++   +       +    V+    ++ L
Sbjct: 299 LAEELTTLVHGADQCAAVIAASKALFGQGELAELDEATLAAALSELPHARVTELAQVVDL 358

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
             + G   S +  RR +K     +NN  ++ E      +D      + L  GKKN     
Sbjct: 359 FAETGLVASKSAGRRTVKEGGAYVNNVKVTAEDAVPAPEDLLHGRWLVLRRGKKNLAAVE 418

Query: 416 LCG 418
           + G
Sbjct: 419 VTG 421


>gi|254828168|ref|ZP_05232855.1| tyrosyl-tRNA synthetase [Listeria monocytogenes FSL N3-165]
 gi|254898234|ref|ZP_05258158.1| tyrosyl-tRNA synthetase [Listeria monocytogenes J0161]
 gi|254912273|ref|ZP_05262285.1| tyrosyl-tRNA synthetase [Listeria monocytogenes J2818]
 gi|254936600|ref|ZP_05268297.1| tyrosyl-tRNA synthetase [Listeria monocytogenes F6900]
 gi|258600555|gb|EEW13880.1| tyrosyl-tRNA synthetase [Listeria monocytogenes FSL N3-165]
 gi|258609197|gb|EEW21805.1| tyrosyl-tRNA synthetase [Listeria monocytogenes F6900]
 gi|293590252|gb|EFF98586.1| tyrosyl-tRNA synthetase [Listeria monocytogenes J2818]
          Length = 419

 Score =  261 bits (668), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 151/386 (39%), Positives = 210/386 (54%), Gaps = 27/386 (6%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I+Q ++   L     +  ++ Y G D +  S+H GHL   M+L   Q  GH+PI
Sbjct: 7   LEWRGAIYQQTDEEGLRKWVDEKQISLYCGIDPSGDSMHIGHLIPFMILRRFQNAGHRPI 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+GG T  IGDPS + E R++   ++I +N+E ++        +  G + A M+NN  W
Sbjct: 67  ILVGGATGTIGDPSGKKEERQLQSMEQISKNVESLRVQLGKIFDF-EGDSAASMVNNYDW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
              +  +D LR+ G  F+VN MLS + V SRL  E  +SF EF Y ILQA DF  L +  
Sbjct: 126 TKDVSILDFLRDYGKEFNVNTMLSKDIVASRL--EVGISFTEFAYQILQAMDFNHLYEFN 183

Query: 192 DCRLQMGGSDQWGNIICGIDL--GERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
           DCRLQ+GGSDQWGNI  G+DL   ++ +  K F LT PLLT A GTK GK+  GAIWLN 
Sbjct: 184 DCRLQIGGSDQWGNITAGLDLIRKKQGENAKAFGLTIPLLTKADGTKFGKSEGGAIWLNP 243

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE--INEAKKIIATEIT 307
           E T+PY F+Q+W N DD DVV + K  T L  +EID +AK    E  +  A+K +A E+T
Sbjct: 244 EKTTPYEFYQFWINTDDRDVVKYLKYFTFLTEAEIDELAKQVETEPHLRAAQKTLAAEMT 303

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGM-------------GLLT 354
             VH  E  E+A   +   F   +        +++ DE+ +G               L+ 
Sbjct: 304 KFVHSEEALEQALKISKALFSGDVK-------ALTADEIEQGFKDVPTFVAEDSEANLVD 356

Query: 355 LIVKAGFATSTNEARRHLKSNAIKIN 380
            +V  G   S  +AR  + + AI IN
Sbjct: 357 WLVTLGIEPSKRQAREDVGNGAIYIN 382


>gi|225869573|ref|YP_002745520.1| tyrosyl-tRNA synthetase [Streptococcus equi subsp. equi 4047]
 gi|254783638|sp|C0M6G7|SYY_STRE4 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|225698977|emb|CAW92036.1| putative tyrosyl-tRNA synthetase [Streptococcus equi subsp. equi
           4047]
          Length = 418

 Score =  261 bits (668), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 139/395 (35%), Positives = 217/395 (54%), Gaps = 20/395 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG + Q ++   L    ++G V+ Y GYD TA SLH GHL  ++    LQ  GHKP 
Sbjct: 7   LKARGLVFQTTDEEALVKALTEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAGHKPY 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+D  R +   + + +  +KIK   S F+ +  G+  A ++NN  W
Sbjct: 67  ALVGGATGLIGDPSFKDAERILQTKETVLDWSQKIKEQLSCFLDFDNGENKAELVNNYDW 126

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
              I +ID LR++G  F++N M+S +SV+ R+  E  +S+ EF Y ++Q YDF EL   +
Sbjct: 127 FSQISFIDFLRDVGKHFTINYMMSKDSVKKRI--ETGISYTEFAYQVMQGYDFYELNAKH 184

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
           +  LQ+GGSDQWGN+  G +L  +        +T PL+T A+G K GK+   AIWL+ + 
Sbjct: 185 NVTLQIGGSDQWGNMTAGTELLRKKADKTGHVMTVPLITDATGKKFGKSEGNAIWLDAKK 244

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATEITTM 309
           TSPY  +Q+W N+ D D V F K  T L + EI  + +      +E  A+K +A E+ T+
Sbjct: 245 TSPYEMYQFWLNVMDDDAVRFLKIFTFLSLDEIAAIEEQFNAARHERLAQKTLAREVVTL 304

Query: 310 VHGREEAEKAATAAMECFDMSIHS-------QHMPTISISKDEVSRGMGLLTLIVKAGFA 362
           VHG    ++A     + F  +I +       Q +  +   + +    + ++ ++V AG +
Sbjct: 305 VHGEAAYQQALNITEQLFAGAIKNLSAAELKQGLSNVPNYQVQAEDSLNIVDMLVTAGIS 364

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
            S  +AR  L++ AI +N           +LQD D
Sbjct: 365 PSKRQAREDLQNGAIYLNGE---------RLQDLD 390


>gi|256788572|ref|ZP_05527003.1| tyrosyl-tRNA synthetase [Streptomyces lividans TK24]
 gi|289772465|ref|ZP_06531843.1| tyrosyl-tRNA synthetase [Streptomyces lividans TK24]
 gi|289702664|gb|EFD70093.1| tyrosyl-tRNA synthetase [Streptomyces lividans TK24]
          Length = 422

 Score =  261 bits (667), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 148/424 (34%), Positives = 237/424 (55%), Gaps = 15/424 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +D +  L  RG   Q ++   L    + G VT Y G+D TA SLH GHL Q++ +  LQ+
Sbjct: 2   TDIVDELKWRGLFAQSTDEDALRKALADGPVTFYCGFDPTAPSLHVGHLVQVLTVRRLQQ 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQE-IQENIEKIKGIFSSFIKYGTGKTDAL 124
            GH+P++L+GG T  IGDP  R  + R + S E +   +E+++G    F+ +  G+  A+
Sbjct: 62  AGHRPLALVGGATGQIGDP--RPTAERTLNSPETVAGWVERLRGQIEPFLSF-EGENAAV 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M+NN  W   +  I+ LR+IG  F VN+ML+ +SV  RL+  + +S+ EF+Y +LQA DF
Sbjct: 119 MVNNLDWTEGLSAIEFLRDIGKHFRVNKMLTKDSVARRLESSEGISYTEFSYQLLQAMDF 178

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT-PKLFALTSPLLTTASGTKMGKTLSG 243
           ++L + Y C +Q GGSDQWGN+  G+DL  RL+    + A  +PL+T A GTK GKT  G
Sbjct: 179 LQLYQRYGCTMQQGGSDQWGNLTAGLDLLHRLEPDASVHAYATPLMTKADGTKFGKTEGG 238

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE---INEAKK 300
           A+WL+ EMT+PY F+Q+W N+DD D+ ++ + L+    +E++ + + Q +E      A++
Sbjct: 239 AVWLDPEMTTPYAFYQFWLNVDDRDISTYMRILSFRSRAELEELER-QTEERPQARAAQR 297

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMS-IHSQHMPTISISKDE-----VSRGMGLLT 354
            +A E+TT+VHG  +      A+   F    +      T++ +  E     V+    ++ 
Sbjct: 298 ALAEELTTLVHGAGQTAAVIAASKALFGQGELAELDEATLAAALSELPHVRVAEPAPVVD 357

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           L  + G   S + ARR +K     +NN+ ++ E      +D      + L  GKKN    
Sbjct: 358 LFAEVGLVASKSAARRTVKEGGAYVNNAKVTGEDAVPAKEDLLHGRWLVLRRGKKNLAAV 417

Query: 415 HLCG 418
            + G
Sbjct: 418 EITG 421


>gi|254386396|ref|ZP_05001701.1| tyrosyl-tRNA synthetase [Streptomyces sp. Mg1]
 gi|194345246|gb|EDX26212.1| tyrosyl-tRNA synthetase [Streptomyces sp. Mg1]
          Length = 421

 Score =  261 bits (667), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 145/423 (34%), Positives = 236/423 (55%), Gaps = 13/423 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +D +  L  RG     ++   L    + G VT Y G+D TA+SLH GHL Q++ +  LQ+
Sbjct: 2   TDIVDELKWRGLFALSTDEEALRKAFADGPVTFYCGFDPTAASLHVGHLVQVLTVRRLQQ 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN-IEKIKGIFSSFIKYGTGKTDAL 124
            GH+P++L+GG T  IGDP  R  + R +   E   N + +++     F+ +  G+  A+
Sbjct: 62  AGHRPLALVGGATGQIGDP--RPTAERTLNDPETVANWVNRLRSQIEPFLSF-EGENAAV 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M+NN  W   +  I+ LR+IG  F VN+ML+ +SV  RL+ +Q +S+ EF+Y +LQ  DF
Sbjct: 119 MVNNLDWTAGLSAIEFLRDIGKHFRVNKMLTKDSVARRLESDQGISYTEFSYQLLQGMDF 178

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT-PKLFALTSPLLTTASGTKMGKTLSG 243
           +EL + Y C LQ GGSDQWGN+  G+DL  RL+   K+ A+ +PL+  A GTK GK+ SG
Sbjct: 179 LELYRRYGCTLQQGGSDQWGNLTAGLDLIHRLEPHAKVHAMATPLMVKADGTKFGKSESG 238

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE--INEAKKI 301
           A+WL+ EMT+PY F+Q+W N+DD D+ ++ + L+     E++ +     +      A++ 
Sbjct: 239 AVWLDPEMTTPYAFYQFWLNVDDRDISTYMRILSFKTREELEELEAQTAERPQARAAQRA 298

Query: 302 IATEITTMVHGREEAEKAATAAMECF---DMSIHSQHMPTISISK---DEVSRGMGLLTL 355
           +A E+TT+VHG ++      A+   F   D++   +     ++S+    +V+    ++ L
Sbjct: 299 LAEELTTLVHGADQCAAVIAASKALFGQGDLAELDEATLAAALSELPHAQVAEAGPVVDL 358

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           + + G   S + ARR +K     +NN  ++ E      +D      + L  GKKN     
Sbjct: 359 LAETGLVASKSAARRTVKEGGAYVNNVKVAAEDAVPAKEDLLHGRWLVLRRGKKNLAAVE 418

Query: 416 LCG 418
           + G
Sbjct: 419 VTG 421


>gi|313633051|gb|EFR99966.1| tyrosyl-tRNA synthetase [Listeria seeligeri FSL N1-067]
 gi|313638014|gb|EFS03301.1| tyrosyl-tRNA synthetase [Listeria seeligeri FSL S4-171]
          Length = 419

 Score =  261 bits (667), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 159/422 (37%), Positives = 225/422 (53%), Gaps = 31/422 (7%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I+Q ++   L     +  ++ Y G D +  S+H GHL   M+L   Q  GH+PI
Sbjct: 7   LEWRGAIYQQTDEEGLRKWVEEKQISLYCGIDPSGDSMHIGHLIPFMILRRFQNAGHRPI 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+GG T  IGDPS + E R++   ++I +N+E ++        +  G + A M+NN  W
Sbjct: 67  ILVGGATGTIGDPSGKKEERQLQSMEQISKNVESLRVQLGKIFDF-EGDSAASMVNNYDW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
              +  +D LR+ G  F+VN MLS + V SRL  E  +SF EF Y ILQA DF  L +  
Sbjct: 126 TKDVSILDFLRDYGKEFNVNTMLSKDIVASRL--EVGISFTEFAYQILQAMDFNHLYEFN 183

Query: 192 DCRLQMGGSDQWGNIICGIDL--GERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
           DCRLQ+GGSDQWGNI  G+DL   ++ +  K F LT PLLT A GTK GK+  GAIWLN 
Sbjct: 184 DCRLQIGGSDQWGNITAGLDLIRKKQGENAKAFGLTIPLLTKADGTKFGKSEGGAIWLNP 243

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE--INEAKKIIATEIT 307
           E T+PY F+Q+W N DD DVV + K  T L  +EI  +AK   +E  +  A+K +A E+T
Sbjct: 244 EKTTPYEFYQFWINTDDRDVVKYLKYFTFLTEAEIADLAKQVEEEPHLRAAQKTLAAEMT 303

Query: 308 TMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIV 357
             VH  E   +A   +   F   + +          + +PT    + E    M L+  +V
Sbjct: 304 KFVHSEEALAQALKISKALFSGDVKALTATEIEQGFKDVPTFEAEEAE----MNLVDWLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF-----GKKNHI 412
             G   S  +AR  + + AI IN      E+LQ   +  D++  I+  F     GKK + 
Sbjct: 360 SLGIEPSKRQAREDVANGAIYIN-----GERLQDLEKVMDASDRIENKFTIVRRGKKKYF 414

Query: 413 IC 414
           + 
Sbjct: 415 LV 416


>gi|15672367|ref|NP_266541.1| tyrosyl-tRNA synthetase [Lactococcus lactis subsp. lactis Il1403]
 gi|81538453|sp|Q9CIH5|SYY_LACLA RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|12723257|gb|AAK04483.1|AE006275_7 tyrosyl-tRNA synthetase 1 [Lactococcus lactis subsp. lactis Il1403]
 gi|326405961|gb|ADZ63032.1| Tyrosyl-tRNA synthetase [Lactococcus lactis subsp. lactis CV56]
          Length = 419

 Score =  261 bits (667), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 148/418 (35%), Positives = 232/418 (55%), Gaps = 22/418 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG + Q ++   L    ++ +V+ Y+GYD TA SLH G+L  ++ +  LQ  GHKP 
Sbjct: 7   LKARGLVFQTTDEAALSKALTEDMVSYYVGYDPTADSLHLGNLVLILTMKRLQMAGHKPY 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+D  R +     + +   KI+     F+ +  G+  A M NN  W
Sbjct: 67  ALVGGATGLIGDPSFKDSERSLQTKDTVTKWSGKIRSQLERFLDFENGENKAEMTNNYNW 126

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
             ++ +ID LR++G  F+VN M+S +SV+SR+  E  +S+ EF Y I+Q YDF EL + +
Sbjct: 127 FENLTFIDFLRDVGKHFTVNYMISKDSVKSRM--ESGISYTEFAYQIMQGYDFYELNQLH 184

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
           +  LQ+GGSDQWGN+  G +L  R    +   +T PL+T ++G K GK+   AIWL+ + 
Sbjct: 185 NVTLQLGGSDQWGNMTAGTELLRRKANKQGHVITIPLITDSTGKKFGKSEGNAIWLDADK 244

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATEITTM 309
           TSPY  +Q+W N+DDAD V   K  T L + EI  + +      +E  A+K++A E+ ++
Sbjct: 245 TSPYEMYQFWLNVDDADAVKMLKIFTFLSLEEIAEIEEQFEAARHERLAQKVLAREVVSL 304

Query: 310 VHGREEAEKAATAAMECF---DM------SIHS--QHMPTISISKDEVSRGMGLLTLIVK 358
           VHG+   E+A   +   F   D+      SI +  +  P   ++ DE    + L+ L++ 
Sbjct: 305 VHGKAAYEQAVKTSEILFGGGDLRQLDAKSILTGLKAAPQHQVTDDE---DLTLVELLIS 361

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN--IKLSFGKKNHIIC 414
           AG A S  +AR  + + AI IN   +  + L   + D D   N    +  GKK + + 
Sbjct: 362 AGIAPSKRQAREDITNGAIYINGERV--QALDYVITDSDKIENRLTVIRRGKKKNFVL 417


>gi|260577967|ref|ZP_05845892.1| tyrosine--tRNA ligase [Corynebacterium jeikeium ATCC 43734]
 gi|258603893|gb|EEW17145.1| tyrosine--tRNA ligase [Corynebacterium jeikeium ATCC 43734]
          Length = 428

 Score =  261 bits (667), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 153/420 (36%), Positives = 235/420 (55%), Gaps = 20/420 (4%)

Query: 6   SDFLSILSE---RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
           SD  +I+ E   RG I+Q ++   L    +Q  +T Y G+D T SSLHAGHL  L++L  
Sbjct: 2   SDNKNIIDELQWRGLINQSTDLEALK-EATQNPITLYCGFDPTGSSLHAGHLVPLIMLKR 60

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRR-MMRSQEIQENIEKIKGIFSSFIKYGTG-- 119
            Q+ GH+PI+L GG T +IGDP  RD   R M+  ++I EN+  IK    +F+ +     
Sbjct: 61  FQQFGHRPITLAGGATGMIGDP--RDVGERSMLTEEQIGENMVAIKKQLEAFVDFAEDSD 118

Query: 120 -KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMI 178
             + A+M+NN  W+  +  I+ LR++G  FS+N ML  ++V+ RL+ +  +S+ EF+YM+
Sbjct: 119 VNSPAVMVNNADWISQMNVIEYLRDVGKNFSLNTMLDRDTVKRRLESD-GISYTEFSYML 177

Query: 179 LQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMG 238
           LQA D+V L   +DC LQ+GG DQWGNI+ G+DL  R+   K+  LT PL+T A G K G
Sbjct: 178 LQANDYVHLHNEFDCVLQIGGGDQWGNIVSGVDLNRRVNGAKVHGLTVPLVTDAEGNKFG 237

Query: 239 KTLSGA-IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI-- 295
           K+  G  +WL+ ++TSPY+++QY+ N  D  V+ + +  T L   EI  + +   +E   
Sbjct: 238 KSTGGGKLWLDPQLTSPYSWYQYFINAGDTVVIDYLRWFTFLSQEEIAELERKVAEEPYK 297

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMS-IHSQHMPTISISKD-----EVSRG 349
            EA++++A E+TT+VHG    E    AA   F  + +     PT++ +       EV   
Sbjct: 298 REAQRVLAREMTTLVHGAAATEAVELAAQALFGKAELQDLDEPTLASALQETEVAEVGAD 357

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
             +L L+V++G   S   ARR +      +NN  I + +      D      + L  GKK
Sbjct: 358 ATILDLLVESGLEKSKGAARRTVGEGGAYVNNQRIEDIEWSPSADDLLHGSWLVLRKGKK 417


>gi|327439210|dbj|BAK15575.1| tyrosyl-tRNA synthetase [Solibacillus silvestris StLB046]
          Length = 423

 Score =  261 bits (667), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 140/405 (34%), Positives = 233/405 (57%), Gaps = 21/405 (5%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           ++ L  L  RG ++Q ++   ++ L ++  V+ Y+G D TA S+H GH+  L+ L   QK
Sbjct: 3   NELLQDLEWRGLLYQQTDAEGMEKLLNEEKVSLYVGVDPTADSMHIGHIVPLLTLRRFQK 62

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD-AL 124
            GH PI L+GG T  +GDPS R E R++    +I +N++ +K        + +   + A+
Sbjct: 63  AGHTPILLVGGATGTVGDPSGRSEERQLQTMDQIDKNVQGLKKQMERLFDFSSDAANGAV 122

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           ++NN  W+  +  ID LR+ G   +VN +L+ ++V SRL  +  +SF EF Y ++Q  DF
Sbjct: 123 LVNNNDWVGPMTLIDFLRDYGKLINVNYILNKDTVASRL--DSGISFTEFAYTLIQGIDF 180

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERL--KTPKLFALTSPLLTTASGTKMGKTLS 242
             L  +++ R+Q+GGSDQWGNI  G+++  +   +  K F +T PL+T A GTK GKT  
Sbjct: 181 NHLYDHHNVRIQVGGSDQWGNITTGLEMIRKTHDENAKAFGITIPLVTKADGTKFGKTAG 240

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE--INEAKK 300
           GA+WL+   TSPY F+Q+W N  DADVV + K  T L   EI+ +A    +E  + +A+K
Sbjct: 241 GAVWLDAAKTSPYEFYQFWINTADADVVKYLKIFTFLSREEIEGLAVSVEEEPHLRKAQK 300

Query: 301 IIATEITTMVHGREEAEKAAT----------AAMECFDMSIHSQHMPTISISKDEVSRGM 350
            +A E+T ++HG E  E A             A+   +M +    +P++ ++K++ +   
Sbjct: 301 ALAEEMTRLIHGEEGLEAAERITKALFSGDLKALSVEEMKVAFSGVPSVEVAKEDKN--- 357

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
            ++ LIV+AG ++S  +AR  + + AI +N   I++ +  I  +D
Sbjct: 358 -IVELIVEAGISSSKRQAREDVTNGAISVNGEKITDLEYVIDAKD 401


>gi|227497666|ref|ZP_03927880.1| tyrosine--tRNA ligase [Actinomyces urogenitalis DSM 15434]
 gi|226832896|gb|EEH65279.1| tyrosine--tRNA ligase [Actinomyces urogenitalis DSM 15434]
          Length = 424

 Score =  261 bits (667), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 146/420 (34%), Positives = 230/420 (54%), Gaps = 15/420 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +D L  L  RG I Q ++   L    ++G VT Y G+D TA SLH GHL  + ++  LQ 
Sbjct: 2   TDILDELQWRGLIAQHTDIDALRAALNEGSVTFYCGFDPTAPSLHHGHLVAVKVMRHLQM 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEK-IKGIFSSFIKYGTGKTDAL 124
            GH P++L+GG T +IGDP  R +  R + ++++     + ++    + + +  G   A 
Sbjct: 62  AGHHPLALVGGATGLIGDP--RAKGERSLNTKDVVAGWARSLQAQLENLLDF-EGDNPAR 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           ++NN  W   +  +D LR++G  F +  MLS + V  RL  E+ +SF EF+Y ILQA D+
Sbjct: 119 IVNNLDWTGQMTAVDFLRDLGKHFRMGTMLSKDIVARRLASEEGISFTEFSYQILQANDY 178

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL + Y C L++GG+DQWGN++ G+DL  +++   +  +T+PL+T A GTK GKT  GA
Sbjct: 179 LELFRRYGCTLEVGGNDQWGNLVGGMDLIHKVEGESVHVMTNPLITKADGTKFGKTEGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKKII 302
           IWLN +M SPY F+Q+W  +DD DVV F K  T L   EI+R+  A     +  EA+K++
Sbjct: 239 IWLNPQMLSPYAFYQFWLRVDDVDVVRFLKVFTFLDREEIERLERATQDNPKAREAQKVL 298

Query: 303 ATEITTMVHGREEAEKA--------ATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLT 354
           A E+TT VHG    E A            +   D +   Q    +  ++ EV R   ++ 
Sbjct: 299 AREVTTWVHGAAAVESAEAATQALWGRGELSDLDEATVLQATADLPTAQLEVGRST-IVD 357

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           L+V AG     + AR+ +      +NN  + +E   +   D  + G + +  G++N  + 
Sbjct: 358 LLVAAGLEKGRSAARKTVAGGGAYLNNVKVEDEDRVVTKDDLLAGGVVLVRKGRRNLAVA 417


>gi|284036022|ref|YP_003385952.1| tyrosyl-tRNA synthetase [Spirosoma linguale DSM 74]
 gi|283815315|gb|ADB37153.1| tyrosyl-tRNA synthetase [Spirosoma linguale DSM 74]
          Length = 433

 Score =  261 bits (667), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 154/438 (35%), Positives = 238/438 (54%), Gaps = 40/438 (9%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG ++ ++   E  +   + +  AYIG+D TA+SLH G+L  +MLL  LQ+ 
Sbjct: 2   NFIDELRWRGMLNDMTPGTEEQL--QKEMTAAYIGFDPTAASLHIGNLATIMLLVHLQRA 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP +L+GG T +IGDPS +   R  +  + +Q N   I+   + F+ +  G   A M+
Sbjct: 60  GHKPFALVGGATGMIGDPSGKAAEREFLSEETLQRNQNGIRQQLTKFLDFDCGANSAEMV 119

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I ++  LRE G   +VN M++ +SV+ RL  E  +SF EF+Y +LQ YDF  
Sbjct: 120 NNYDWFKEISFLGFLREAGKHITVNYMMAKDSVKKRL--ETGISFTEFSYQLLQGYDFYW 177

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--------KLFALTSPLLTTASGTKMG 238
           L K+ + RLQMGGSDQWGNI  G +   R +          + FALT+PL+T + GTK G
Sbjct: 178 LYKHKNVRLQMGGSDQWGNITTGTEFIRRKEGGAEHLEGGHQAFALTTPLVTKSDGTKFG 237

Query: 239 KTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEA 298
           K+ SG +WL+  +TSPY F+Q+W N  DAD     +  T L   EI+ +     ++ NEA
Sbjct: 238 KSESGNVWLDPALTSPYQFYQFWLNTADADCPRLIRVFTLLTREEIEELE----RQHNEA 293

Query: 299 ------KKIIATEITTMVH---GREEAEKAATA-----------AMECFDMSIHSQHMPT 338
                 +K IA E+TT +H   G E A KA+             +++  +  +  + +P 
Sbjct: 294 PHLRILQKAIAKEVTTRIHSESGYELAVKASEVLFGKATLETLRSIQADEFDVIFEGVPL 353

Query: 339 ISISKDEVSRG---MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
             +S +E++       LL++  +     S  EARR +  NA+ IN + +++    +   D
Sbjct: 354 TEVSAEELANSKDITDLLSVASRGEVYASKGEARRAITQNAVSINKTKVTDPAAPVAF-D 412

Query: 396 FDSTGNIKLSFGKKNHII 413
           +     I +S GKKNH++
Sbjct: 413 WLQDRYILISKGKKNHLL 430


>gi|262164083|ref|ZP_06031822.1| tyrosyl-tRNA synthetase [Vibrio mimicus VM223]
 gi|262027611|gb|EEY46277.1| tyrosyl-tRNA synthetase [Vibrio mimicus VM223]
          Length = 426

 Score =  261 bits (667), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 159/418 (38%), Positives = 233/418 (55%), Gaps = 15/418 (3%)

Query: 12  LSERGFIHQISNPREL-DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           L +RG I Q ++   L +   +  V+  Y G+D TA SLH GHL  L++L   Q  GH+ 
Sbjct: 10  LQQRGLIAQSTSLEALIERFATPQVL--YCGFDPTAGSLHIGHLVPLLMLKRFQNAGHQA 67

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM-LNNE 129
           I+L+GG T +IGDPSF+   R +  +Q +Q+ +  +    +  +   +     L+ +NN 
Sbjct: 68  IALIGGATGMIGDPSFKANERVLNSAQTVQQWVSDLSQQITHLMTSQSENPAPLITVNNA 127

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDFVELA 188
            W+  I  ID  R++G  FSVN M++ ESV+ RL R +Q +SF EF+Y +LQ+YDF  L 
Sbjct: 128 DWIGKINLIDFFRDVGKHFSVNTMINRESVKQRLARPDQGISFTEFSYSLLQSYDFAHLN 187

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
           + + C LQ+GG+DQWGNI+ GIDL  RL   ++  LT PL+T + GTK GKT SGA+WL 
Sbjct: 188 REFGCALQIGGNDQWGNIVSGIDLTRRLNGAEVCGLTLPLITKSDGTKFGKTESGAVWLE 247

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEI 306
              TSPY F+Q+W N DDADV  F    T L  +EI+  R A    +   +A++I+A  +
Sbjct: 248 SSKTSPYRFYQFWLNSDDADVYRFLAYYTFLSTAEIEDIRQADALREGKPQAQQILAEHV 307

Query: 307 TTMVHGRE--EAEKAATAAMECFDMSIHS----QHMPTISISKDEVSRGMGLLTLIVKAG 360
           T  VHG E   A +  T A+   D+S  S    + +    +     SR   LL L++ +G
Sbjct: 308 TRFVHGEEGLAAAQRITQALFSGDLSYLSLSELRQLELDGLPCVAASRTDTLLDLLLNSG 367

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLCG 418
            A+S  +AR  L++ AI++N   +  E +      FD      L  GKK   +  L G
Sbjct: 368 LASSKRQAREWLENGAIRVNGERVLQEGVLSGFALFDRY--YVLQRGKKQFALIKLEG 423


>gi|110637940|ref|YP_678147.1| tyrosyl-tRNA synthetase [Cytophaga hutchinsonii ATCC 33406]
 gi|123163593|sp|Q11UV9|SYY_CYTH3 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|110280621|gb|ABG58807.1| tyrosyl-tRNA synthetase [Cytophaga hutchinsonii ATCC 33406]
          Length = 427

 Score =  261 bits (666), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 155/429 (36%), Positives = 227/429 (52%), Gaps = 24/429 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG +H I    E  +L +Q   TAY+G+D TASSL  G+L  +M+L   Q  
Sbjct: 3   NFVEELKWRGMLHDIMPGTEEYLLKNQ--TTAYVGFDPTASSLTIGNLVTIMMLVHFQHA 60

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P++L+GG T +IGDPS R E R  +  + ++ N E I+   + F+ +  G   A ++
Sbjct: 61  GHIPMALVGGATGMIGDPSGRSEERNFLSEETLRLNQEGIRKQLTKFLDFDCGANSAKLV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I +++ LR+ G   +VN M++ +SV+ RL  E  L+F EF+Y +LQ YDF  
Sbjct: 121 NNYDWFKGIGFLEFLRDAGKHLTVNYMMAKDSVKKRL--EVGLTFTEFSYQLLQGYDFCH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L +  + RLQMGGSDQWGNI  G +L  R+     FALT+PLLT A GTK GK+  G IW
Sbjct: 179 LYQKENVRLQMGGSDQWGNITSGTELIRRMADGTAFALTTPLLTKADGTKFGKSAGGNIW 238

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEA--KKIIAT 304
           L+  +TSPY F+Q+W N  D DV  F +  T L    I+ +     K  +E   +K +A 
Sbjct: 239 LDAALTSPYKFYQFWLNSADEDVSRFIRIFTLLSKEAIEALEAEHAKAPHERLLQKTLAK 298

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISK---DEVS 347
           +IT  VH  E+ E A  A+   F  S+                + +P I IS+   DE  
Sbjct: 299 DITIRVHSEEDYEMAIKASEILFGKSVTEDLQALNESTLLSVFEGIPLIEISRSILDEKP 358

Query: 348 RGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFG 407
             + LL+ +  +    S  EAR+ ++   + IN  I  N   +I          + +  G
Sbjct: 359 SVLDLLSTLTNSEVFPSKGEARKMIQGGGVSINK-IKINSSEEIVNYPLLLNNYLLVQKG 417

Query: 408 KKNHIICHL 416
           KKN+ +   
Sbjct: 418 KKNYYLLRF 426


>gi|116492043|ref|YP_803778.1| tyrosyl-tRNA synthetase [Pediococcus pentosaceus ATCC 25745]
 gi|122266493|sp|Q03HI6|SYY_PEDPA RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|116102193|gb|ABJ67336.1| tyrosyl-tRNA synthetase [Pediococcus pentosaceus ATCC 25745]
          Length = 417

 Score =  261 bits (666), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 153/424 (36%), Positives = 228/424 (53%), Gaps = 33/424 (7%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L+ RG ++Q ++   L  L  +  +  Y G D T  S+H GHL   M+L   Q+ GHKP+
Sbjct: 7   LTWRGAVNQQTDEEGLKKLTDEKKIGLYAGIDPTGDSMHIGHLIPFMVLKRFQQAGHKPV 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+GGGT  IGDPS +   R +   +++  N E +K   S  +K+  G  +  M+NN  W
Sbjct: 67  ILIGGGTGSIGDPSGKKSERVLQTMEQVHHNEEALK---SQMVKF-FGTDNFRMVNNYDW 122

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L  +  +D LR+ G  F+VN ML+ + V SRL  E  +SF EF Y ILQ+ DF+ L KN 
Sbjct: 123 LSKMSLLDFLRDYGKLFNVNTMLAKDIVASRL--EVGISFTEFTYQILQSIDFLHLYKNE 180

Query: 192 DCRLQMGGSDQWGNIICGIDLGERL--KTPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
           D +LQ+GG DQWGNI  G DL  R+  +  K++ LT PLL  A GTK GK+  G +WL+ 
Sbjct: 181 DVQLQIGGGDQWGNITAGTDLIHRMEGQEAKVYGLTIPLLLKADGTKFGKSEGGNVWLDA 240

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIATEIT 307
           E T+PY F+Q+W N DD DVV F K  T L   EI+R+A+      E  EA++ +A E+T
Sbjct: 241 EKTTPYEFYQFWLNQDDRDVVKFLKYFTFLSHEEIERLAETVKTAPEKREAQRRLAEEVT 300

Query: 308 TMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIV 357
           + VHG    E+A   +   F   +            ++MP++ +   E  +   +L L+ 
Sbjct: 301 SFVHGDAAVEEAQHISAALFSGEVKDLTASEIEQGFKNMPSVDV---ENKKENIVLWLVD 357

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF-----GKKNHI 412
                +S  +AR  +++ AI+IN   +++   +I     D   N    F     GKK + 
Sbjct: 358 TTKIESSRRQAREDIQNGAIRINGEKVTDVNAEI-----DPASNFDGKFVIVRRGKKKYF 412

Query: 413 ICHL 416
           +  +
Sbjct: 413 LARV 416


>gi|283853234|ref|ZP_06370486.1| tyrosyl-tRNA synthetase [Desulfovibrio sp. FW1012B]
 gi|283571407|gb|EFC19415.1| tyrosyl-tRNA synthetase [Desulfovibrio sp. FW1012B]
          Length = 424

 Score =  261 bits (666), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 159/426 (37%), Positives = 231/426 (54%), Gaps = 30/426 (7%)

Query: 12  LSERGFIHQISNPREL-DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           LS RG +HQ S+   L D L + G V  Y G+D TA SLH G+L  L+ L    K GHKP
Sbjct: 7   LSWRGLLHQTSDDAGLRDHLETPGRVL-YCGFDPTADSLHIGNLVPLLALARFAKAGHKP 65

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM-LNNE 129
           + L+GG T +IGDPS +D+ R++     +  + EKIK    +F +   G  DA+  +NN 
Sbjct: 66  LFLLGGATGLIGDPSGKDKERQLKTEDLVGASAEKIKAQAMAFFER-LGVADAVTPVNNL 124

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQS-LSFLEFNYMILQAYDFVELA 188
            W   I  I+ LR+ G  F++N ML+ +SV+SR+ RE++ +S+ EF+YMILQ+ DF  L 
Sbjct: 125 DWTRPISIIEFLRDTGKHFTINYMLAKDSVKSRIGREETGISYTEFSYMILQSLDFEHLC 184

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
           +   C LQ+GG DQ+GNI  G++L  R    + + LT PL+TTASG K GK+  GAI+LN
Sbjct: 185 RTQGCTLQIGGGDQFGNITAGLELIRRKTGRQAYGLTFPLITTASGAKFGKSEKGAIFLN 244

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE--INEAKKIIATEI 306
            E+TSPY F+QYW N DD DVV+F +  T L   +I+ +A     E  +  A+K +A E 
Sbjct: 245 PELTSPYAFYQYWINADDRDVVNFLRYFTFLSQEDIEALAGQTEAEPHLRAAQKRLARET 304

Query: 307 TTMVHGREEAEKAATAAMECFD----------------MSIHSQHMPTISISKDEVSRGM 350
           T M+HG  E  K        F                  +   ++ PT+           
Sbjct: 305 TAMIHGDAELAKVEAVTEALFGGGDLTTVDAATLKAALQAAPGRNYPTLGDVPP------ 358

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            L  L+       S ++AR+ +K+  + INN  ++ E   +  +DF     + L  GKKN
Sbjct: 359 -LPKLLADLALCPSNSQARKDIKAGGVSINNVRVTAEDRTLVPEDFLGGDLLILRKGKKN 417

Query: 411 HIICHL 416
           + +  L
Sbjct: 418 YGVVTL 423


>gi|239940297|ref|ZP_04692234.1| putative tyrosyl-tRNA synthetase [Streptomyces roseosporus NRRL
           15998]
 gi|239986779|ref|ZP_04707443.1| putative tyrosyl-tRNA synthetase [Streptomyces roseosporus NRRL
           11379]
 gi|291443730|ref|ZP_06583120.1| tyrosyl-tRNA synthetase [Streptomyces roseosporus NRRL 15998]
 gi|291346677|gb|EFE73581.1| tyrosyl-tRNA synthetase [Streptomyces roseosporus NRRL 15998]
          Length = 423

 Score =  261 bits (666), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 150/415 (36%), Positives = 229/415 (55%), Gaps = 13/415 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +D +  L  RG   Q ++   L    + G VT Y G+D TA+SLH GHL Q++ +  LQ+
Sbjct: 2   TDIVDELKWRGLFAQSTDEDALRKALADGPVTFYCGFDPTAASLHVGHLVQVLTMRRLQQ 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQE-IQENIEKIKGIFSSFIKYGTGKTDAL 124
            G KP++L+GG T  IGDP  R  + R +   E I   + +++G    F+ +  G   A 
Sbjct: 62  AGLKPLALVGGATGQIGDP--RPTAERTLNDPETIAAWVRRLRGQIEPFLTF-EGPNAAT 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M+NN  W   +  I+ LR+IG  F VN+ML+ +SV  RL+ ++ +S+ EF+Y +LQ  DF
Sbjct: 119 MVNNLDWTAGMSAIEFLRDIGKHFRVNKMLTKDSVARRLESQEGISYTEFSYQLLQGMDF 178

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLF-ALTSPLLTTASGTKMGKTLSG 243
           +EL + + C LQ GGSDQWGN+  GIDL  RL+   +  AL +PL+T A GTK GK+ SG
Sbjct: 179 LELYRRHGCTLQQGGSDQWGNLTAGIDLIHRLEPGAVVHALATPLMTKADGTKFGKSESG 238

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT--TLPMSEIDRMAKLQGKEINEAKKI 301
           A+WL+ EMT+PY F+Q+W N+DD DV  + + L+  +    E       +  +   A++ 
Sbjct: 239 AVWLDPEMTTPYAFYQFWLNVDDRDVSRYLRILSFRSREELEELEKLTEERPQARNAQRA 298

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMS-IHSQHMPTISISKDEVSRGM-----GLLTL 355
           +A E+TT+VHG E+      A+   F    +      T+S +  EV          L+ L
Sbjct: 299 LAEELTTLVHGGEQCAAVIAASKALFGQGDLAELDEATLSAALSEVPHATVAELGPLVDL 358

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
           +V+ G A S + ARR +K     +NN  + + ++     +      + L  GKKN
Sbjct: 359 LVEVGLAPSKSGARRTVKEGGAYVNNVKVVDGEVAPDAGELLHGRWLVLRRGKKN 413


>gi|289434878|ref|YP_003464750.1| hypothetical protein lse_1513 [Listeria seeligeri serovar 1/2b str.
           SLCC3954]
 gi|289171122|emb|CBH27664.1| tyrS [Listeria seeligeri serovar 1/2b str. SLCC3954]
          Length = 419

 Score =  261 bits (666), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 158/422 (37%), Positives = 225/422 (53%), Gaps = 31/422 (7%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I+Q ++   L     +  ++ Y G D +  S+H GHL   M+L   Q  GH+PI
Sbjct: 7   LEWRGAIYQQTDEEGLRKWVEEKQISLYCGIDPSGDSMHIGHLIPFMILRRFQNAGHRPI 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+GG T  IGDPS + E R++   ++I +N+E ++        +  G + A M+NN  W
Sbjct: 67  ILVGGATGTIGDPSGKKEERQLQSMEQISKNVESLRVQLGKIFDF-EGDSAASMVNNYDW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
              +  +D LR+ G  F+VN MLS + V SRL  E  +SF EF Y ILQA DF  L +  
Sbjct: 126 TKDVSILDFLRDYGKEFNVNTMLSKDIVASRL--EVGISFTEFAYQILQAMDFNHLYEFN 183

Query: 192 DCRLQMGGSDQWGNIICGIDL--GERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
           DCRLQ+GGSDQWGNI  G+DL   ++ +  K F LT PLLT A GTK GK+  GAIWLN 
Sbjct: 184 DCRLQIGGSDQWGNITAGLDLIRKKQGENAKAFGLTIPLLTKADGTKFGKSEGGAIWLNP 243

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE--INEAKKIIATEIT 307
           E T+PY F+Q+W N DD DV+ + K  T L  +EI  +AK   +E  +  A+K +A E+T
Sbjct: 244 EKTTPYEFYQFWINTDDRDVIKYLKYFTFLTEAEIADLAKQVEEEPHLRAAQKTLAAEMT 303

Query: 308 TMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIV 357
             VH  E   +A   +   F   + +          + +PT    + E    M L+  +V
Sbjct: 304 KFVHSEEALAQALKISKALFSGDVKALTATEIEQGFKDVPTFEAEETE----MNLVDWLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF-----GKKNHI 412
             G   S  +AR  + + AI IN      E+LQ   +  D++  I+  F     GKK + 
Sbjct: 360 SLGIEPSKRQAREDVANGAIYIN-----GERLQDLEKVMDASDRIENKFTIVRRGKKKYF 414

Query: 413 IC 414
           + 
Sbjct: 415 LV 416


>gi|283769555|ref|ZP_06342451.1| tyrosine--tRNA ligase [Bulleidia extructa W1219]
 gi|283103823|gb|EFC05209.1| tyrosine--tRNA ligase [Bulleidia extructa W1219]
          Length = 437

 Score =  261 bits (666), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 151/383 (39%), Positives = 228/383 (59%), Gaps = 14/383 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +FL  L  RG +   ++   L     +   T Y G+D TA SLH GHL Q+MLL   QK 
Sbjct: 2   NFLEELQWRGLVKDYTDLEALQKRLEKPT-TVYCGFDPTADSLHVGHLQQIMLLRRYQKV 60

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+ ++L GG T +IGDP    E R++++ +E+  N+E IK   + FI++ +G   A+M+
Sbjct: 61  GHRVLALAGGFTGMIGDPRPTTE-RKLLQHEEVLHNVECIKHQLAMFIEF-SGDNAAVMV 118

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  +  +D LR+ G  F++  ML  ++++ R+  +  LS+LEF+Y ILQA DF  
Sbjct: 119 NNNDWLEKMTTLDFLRDFGKQFNIAYMLQKDTIKRRV--DTGLSYLEFSYTILQAIDFYH 176

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKLFALTSPLLTTASGTKMGKTLSGA 244
           L K YDCR+Q+GGSDQWGN+  G+DL ++L+    ++F +TSPL+T + G+K GK+    
Sbjct: 177 LFKEYDCRVQIGGSDQWGNLTSGMDLIKKLEGNHTEVFGITSPLITKSDGSKFGKSEGRN 236

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKII 302
           IWL+   TS Y F+Q+W N  D  +V + KRL+     EI+R+A L     E  EA+K +
Sbjct: 237 IWLDPNRTSAYEFYQFWLNTPDDSIVDYLKRLSLKTPEEIERLAHLVETEPERREAQKAL 296

Query: 303 ATEITTMVHGREEAEKAATAAMECFD---MSIHSQHMPT-ISISKDE-VSRGMGLLTLIV 357
           A E+TT VHG++  EKA   +   F    MS+    +   +S +K   V  G+G+L  +V
Sbjct: 297 ACELTTYVHGQKGLEKALRISETLFSGDFMSLSPAELKEGLSDAKKVLVDSGIGILDALV 356

Query: 358 KAGFATSTNEARRHLKSNAIKIN 380
            AG   S + AR+ ++  +I IN
Sbjct: 357 LAGVCQSKSNARQLIQQGSISIN 379


>gi|256420552|ref|YP_003121205.1| tyrosyl-tRNA synthetase [Chitinophaga pinensis DSM 2588]
 gi|256035460|gb|ACU59004.1| tyrosyl-tRNA synthetase [Chitinophaga pinensis DSM 2588]
          Length = 427

 Score =  261 bits (666), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 140/388 (36%), Positives = 213/388 (54%), Gaps = 19/388 (4%)

Query: 15  RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLM 74
           RG +  I    E  +L  + + +AY+G+D TA SLH G L  ++LL  LQ+ GHKP +L+
Sbjct: 10  RGMVQDIMPGTEEQLL--KEMTSAYVGFDPTADSLHIGSLVPILLLVHLQRAGHKPFALV 67

Query: 75  GGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL-MLNNETWLC 133
           GG T ++GDPSF+ E R+M+    +  N   IK     F+ +   + +A  M+NN  W  
Sbjct: 68  GGATGMVGDPSFKAEERKMLDLDTLAHNQNGIKAQLEKFLDFDPARPNAAEMVNNFDWFK 127

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDC 193
            I ++D +R+ G   +VN M+S +SV+ RL+ +  +SF EF Y ++Q YDF  L    +C
Sbjct: 128 DISFLDFIRDTGKHITVNYMMSKDSVKRRLEGDSGMSFTEFTYQLIQGYDFYHLYTAKNC 187

Query: 194 RLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTS 253
           +LQMGGSDQWGNI+ G +L  R    + FA T PLL  A G+K GK+  G IWL+ + TS
Sbjct: 188 KLQMGGSDQWGNIVTGTELIRRKANGEAFAFTCPLLKKADGSKFGKSERGNIWLDPQKTS 247

Query: 254 PYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKKIIATEITTMVH 311
           PY F+Q+W    D D  ++ K  T L   EI+ +  A  Q     + +K +A E+T  VH
Sbjct: 248 PYLFYQFWVKTADEDAKNYIKIFTFLGQEEINTLIAAHDQDPGKRQLQKKLAEELTVFVH 307

Query: 312 GREEAEKAATAA--------MECFDMSIHSQHM------PTISISKDEVSRGMGLLTLIV 357
           G+ E E A  A+         E       SQ +      P ++++  ++  G  +L+ + 
Sbjct: 308 GQTELEFALKASDLLFRNDTAEVLQSLTESQLLEIMDGVPQVAVAAADLEAGKDILSFLA 367

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIIS 385
           +     S  EAR+ +++N I IN   +S
Sbjct: 368 ETNILPSKGEARKMIQNNGISINKVKVS 395


>gi|290961478|ref|YP_003492660.1| tyrosyl-tRNA synthetase [Streptomyces scabiei 87.22]
 gi|260651004|emb|CBG74122.1| tyrosyl-tRNA synthetase (EC 6.1.1.1) [Streptomyces scabiei 87.22]
          Length = 422

 Score =  260 bits (665), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 148/424 (34%), Positives = 234/424 (55%), Gaps = 15/424 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +D +  L  RG     ++   L    + G VT Y G+D TA SLH GHL Q++ +  LQ+
Sbjct: 2   TDIVDELKWRGLFSLSTDEDALRKALADGPVTFYCGFDPTAPSLHVGHLVQVLTVRRLQQ 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQE-IQENIEKIKGIFSSFIKYGTGKTDAL 124
            GH+P++L+GG T +IGDP  R  + R +   E +   + +++     F+ +  G+  A+
Sbjct: 62  AGHRPLALVGGATGLIGDP--RPTAERTLNDPETVAGWVGRLRAQIEPFLSF-EGENAAV 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M+NN  W   +  I+ LR+IG  F VN+ML+ +SV  RL+ EQ +S+ EF+Y ILQ  DF
Sbjct: 119 MVNNLDWTEGLSAIEFLRDIGKHFRVNKMLAKDSVARRLESEQGISYTEFSYQILQGMDF 178

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLLTTASGTKMGKTLSG 243
           ++L + Y C LQ GGSDQWGN+  G+DL  R++   +  AL +PL+T A GTK GKT  G
Sbjct: 179 LQLYRRYGCTLQQGGSDQWGNLTAGLDLIHRMEPGVEAHALATPLMTKADGTKFGKTEGG 238

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE---INEAKK 300
           A+WL+ EMTSPY F+Q+W N+DD D+  + + L+    +E++ + + Q +E      A++
Sbjct: 239 AVWLDPEMTSPYAFYQFWLNVDDRDISGYMRILSFRSRAELEELER-QTEERPQARAAQR 297

Query: 301 IIATEITTMVHGREE------AEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLT 354
            +A E+TT+VHG E+      A +A     E  ++   +       +   +V     ++ 
Sbjct: 298 ALAEELTTLVHGAEQTAAVIAASRALFGQGELAELDERTLAAALSELPHVKVPEPAPVVD 357

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           L+ +AG   S +  RR +K     +NN  ++ E      +D      + L  GKKN    
Sbjct: 358 LLAEAGLVPSKSAGRRTVKEGGAYVNNVKVTAEDAVPAAEDLIHGRWLVLRRGKKNLAAV 417

Query: 415 HLCG 418
            + G
Sbjct: 418 EVTG 421


>gi|325067200|ref|ZP_08125873.1| tyrosyl-tRNA synthetase [Actinomyces oris K20]
          Length = 426

 Score =  260 bits (665), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 147/422 (34%), Positives = 234/422 (55%), Gaps = 27/422 (6%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +D L  L  RG I Q ++   L    S G VT Y G+D TA SLH GHL  + ++  LQ 
Sbjct: 8   TDILDELQWRGLIAQHTDIDALRAALSDGAVTFYCGFDPTAPSLHHGHLVAVKVMRHLQL 67

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI--------QENIEKIKGIFSSFIKYG 117
            GH+P++L+GG T +IGDP  R +  R + ++++        QE +E +           
Sbjct: 68  AGHRPLALVGGATGLIGDP--RAKGERSLNTKDVVAGWAASLQEQLENLLDF-------- 117

Query: 118 TGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYM 177
           +G   A ++NN  W  ++  ID LR++G  F +  MLS + V  RL  E+ +S+ EF+Y 
Sbjct: 118 SGDNPAQIVNNLDWTQAMSAIDFLRDLGKHFRMGTMLSKDIVARRLASEEGISYTEFSYQ 177

Query: 178 ILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
           +LQA D++EL + Y C L++GG+DQWGN++ G+DL  +++   +  +T+PL+T A GTK 
Sbjct: 178 VLQANDYLELYRRYGCTLEVGGNDQWGNLVGGMDLIHKVEGASVHVMTNPLITKADGTKF 237

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEI 295
           GK+  GAIWLN EM SPY F+Q+W  +DDADVV F K  T L   EI+R+  +  +  + 
Sbjct: 238 GKSEGGAIWLNPEMLSPYAFYQFWLQVDDADVVRFLKVFTFLEPEEIERLEAVTAENPKA 297

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECF------DMSIHSQHMPTISISKDEVSRG 349
            EA++++A E+ T VHG +   +A  A    +      D+   +    T  ++  +V+ G
Sbjct: 298 REAQRVLAHEVCTWVHGADATAQAEAATSALWGRGDLADVDEATILAATADLASGDVAVG 357

Query: 350 M-GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGK 408
              ++ L+V  G     N AR+ +      INN  +++E   I  +   + G + +  G+
Sbjct: 358 QTTIVDLLVGTGLERGRNAARKTIAGGGAYINNVKVADETAVIGPEHLLAGGVVLVRKGR 417

Query: 409 KN 410
           +N
Sbjct: 418 RN 419


>gi|220912279|ref|YP_002487588.1| tyrosyl-tRNA synthetase [Arthrobacter chlorophenolicus A6]
 gi|219859157|gb|ACL39499.1| tyrosyl-tRNA synthetase [Arthrobacter chlorophenolicus A6]
          Length = 437

 Score =  260 bits (665), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 146/413 (35%), Positives = 228/413 (55%), Gaps = 21/413 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG +H  ++  EL+ L + G VT Y G+D TA SLH G+L QL+++  LQ  GHKP+
Sbjct: 23  LKWRGLVHVSTDEAELEKLLAGGPVTYYCGFDPTAPSLHLGNLVQLLVMRRLQLAGHKPL 82

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQE-IQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
            L+GG T +IGDP  R  + R + +++ + E +  ++     F+ +  G   A M+NN  
Sbjct: 83  GLVGGSTGMIGDP--RPTAERTLNTKDTVAEWVGYLQAQVRRFLSF-EGDNAARMVNNLD 139

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           W   +  ID LRE+G  F V  ML  ++V SRL  ++ +S+ EF+Y ILQ  D+++L ++
Sbjct: 140 WTAPLSAIDFLREVGKHFRVGTMLRKDAVASRLSSDEGISYTEFSYQILQGMDYLQLYRD 199

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKE 250
           Y C LQ GGSDQWGN+  G +L  +++   + AL +PL+T + GTK GK+   AIWL+  
Sbjct: 200 YACMLQTGGSDQWGNLTSGTELIRKVEGKSVHALGTPLITNSDGTKFGKSEGNAIWLDAG 259

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE--INEAKKIIATEITT 308
           M S Y F+Q+W N  DADVV   K  T L  +EI+ +A    +     E ++ +A E+T+
Sbjct: 260 MCSAYAFYQFWLNTADADVVDRLKVFTFLTRAEIEDIATSVAERPFAREGQRKLAFEVTS 319

Query: 309 MVHGREEAEKAATAAMECFD-----------MSIHSQHMPTISISKDEVSRGMGLLTLIV 357
           +VHG E  EK   A+   F            +   +  +PT ++  D     +G++ L+V
Sbjct: 320 LVHGVEATEKVIAASAALFGNGDLGALDKQTLQAATSELPTATVQVD----ALGIVDLLV 375

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            +G + S + ARR +      +NN  + + +  I   +      + L  GKKN
Sbjct: 376 ASGLSESKSAARRTVGEGGAYVNNEKVLDPETVIAESELLHGQYLLLRRGKKN 428


>gi|117928461|ref|YP_873012.1| tyrosyl-tRNA synthetase [Acidothermus cellulolyticus 11B]
 gi|189083639|sp|A0LUB6|SYY_ACIC1 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|117648924|gb|ABK53026.1| tyrosyl-tRNA synthetase [Acidothermus cellulolyticus 11B]
          Length = 426

 Score =  260 bits (665), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 142/400 (35%), Positives = 218/400 (54%), Gaps = 20/400 (5%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L+ RG I Q ++   L    + G +T Y G+D TA SLH GHL Q++ L   Q  G
Sbjct: 4   LLDDLAWRGLIAQSTDLEALRAAMNTGPITVYCGFDPTAPSLHIGHLVQILTLRRFQDAG 63

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK---TDAL 124
           H+PI+L+GG T +IGDPS R   R +     +    E+I    + F+ + TG+     A+
Sbjct: 64  HRPIALVGGATGLIGDPSGRTTERALNDPDVVAGWAERIHRQLAPFLDF-TGERAGQPAI 122

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
            +NN  W   +  I+ LR++G  F V RML+ E V +RL+ EQ +S+ EF+Y ILQ+ DF
Sbjct: 123 AVNNLEWTGRLTAIEFLRDVGKHFRVGRMLAKEVVAARLRSEQGISYTEFSYQILQSLDF 182

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL + Y C LQ+GG DQWGN+  GI+L  +++   + AL +PL+T A GTK GKT  GA
Sbjct: 183 LELYRRYRCVLQIGGIDQWGNLTSGIELIHKVEGVDVHALATPLVTKADGTKFGKTAGGA 242

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKII 302
           +WL+  +TSPY F+Q+W N DD DV ++ +  +     E++ + K  G++      ++ +
Sbjct: 243 VWLDPALTSPYAFYQFWINTDDRDVPAYLRYFSLKNKDELEALEKDAGRDPAARLGQRAL 302

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMP-----------TISISKDEVSRGMG 351
           A E+TT+VHG  E  K   A+   F     +   P            +++  D   R   
Sbjct: 303 AEELTTLVHGATECGKVVAASAALFGRGELAGVEPETLAAALAEAGLVTMPFDPPPR--- 359

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
           ++  +V  G   S + ARR +      +NN  +++   QI
Sbjct: 360 VVDALVATGLVESRSAARRVISEGGAYVNNEKVTDVDAQI 399


>gi|29348639|ref|NP_812142.1| tyrosyl-tRNA synthetase [Bacteroides thetaiotaomicron VPI-5482]
 gi|253569018|ref|ZP_04846428.1| tyrosyl-tRNA synthetase [Bacteroides sp. 1_1_6]
 gi|298387008|ref|ZP_06996562.1| tyrosine--tRNA ligase [Bacteroides sp. 1_1_14]
 gi|81443579|sp|Q8A2S5|SYY_BACTN RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|29340544|gb|AAO78336.1| tyrosyl-tRNA synthetase [Bacteroides thetaiotaomicron VPI-5482]
 gi|251841037|gb|EES69118.1| tyrosyl-tRNA synthetase [Bacteroides sp. 1_1_6]
 gi|298260158|gb|EFI03028.1| tyrosine--tRNA ligase [Bacteroides sp. 1_1_14]
          Length = 430

 Score =  260 bits (664), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 149/427 (34%), Positives = 227/427 (53%), Gaps = 22/427 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG +  I    E   L ++  VTAY+G D TA SLH GHL  +M+L  LQ+ 
Sbjct: 2   NFVEELRWRGMLQDIMPGTEE--LLNKEQVTAYLGIDPTADSLHIGHLCGVMILRHLQRC 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD-ALM 125
           GHKP++L+GG T +IGDPS +   R ++  + ++ N   IK   + F+ + +   + A +
Sbjct: 60  GHKPLALIGGATGMIGDPSGKSAERNLLNEETLRHNQACIKKQLAKFLDFESDVPNRAEL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQAYD 183
           +NN  W+    ++D +RE+G   +VN M++ +SV+ RL  E    LSF EF Y +LQ YD
Sbjct: 120 VNNYDWMKEFSFLDFVREVGKHITVNYMMAKDSVKRRLNGEARDGLSFTEFTYQLLQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ L +   C+LQMGGSDQWGNI  G +L  R    ++FALT PL+T A G K GKT SG
Sbjct: 180 FLHLYETKGCKLQMGGSDQWGNITTGAELIRRTNGGEVFALTCPLITKADGGKFGKTESG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA--KLQGKEINEAKKI 301
            IWL+   TSPY F+Q+W N+ D+D   + K  T++   EI+ +     Q   +   +K 
Sbjct: 240 NIWLDPRYTSPYKFYQFWLNVSDSDAERYIKIFTSIEKEEIEALVAEHQQAPHLRALQKR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDEVS 347
           +A E+T MVH  E+   A  A+   F  +                 + +P   IS+D ++
Sbjct: 300 LAKEVTIMVHSEEDYNAAVDASNILFGNATSESLRKLDEDTLLAVFEGVPQFEISRDALA 359

Query: 348 RGMGLLTLIV-KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+  + L V  A    S  E R+ ++   + +N   +      I   D      + +  
Sbjct: 360 EGVKAVDLFVDNAAVFASKGEMRKLVQGGGVSLNKEKLEAFDQVITTADLLDGKYLLVQR 419

Query: 407 GKKNHII 413
           GKKN+ +
Sbjct: 420 GKKNYFL 426


>gi|297583580|ref|YP_003699360.1| tyrosyl-tRNA synthetase [Bacillus selenitireducens MLS10]
 gi|297142037|gb|ADH98794.1| tyrosyl-tRNA synthetase [Bacillus selenitireducens MLS10]
          Length = 424

 Score =  260 bits (664), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 158/426 (37%), Positives = 223/426 (52%), Gaps = 32/426 (7%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG +HQ+++   L  L  Q  V  Y G+D T  SLH GHL  +++L   Q  GHKP 
Sbjct: 7   LQYRGLMHQVTDEEGLKRLLEQEQVKLYCGFDPTGDSLHIGHLLTILMLRRFQLAGHKPF 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQEN-IEKIKGIFSSFIKYGTGKTDALMLNNET 130
            L+GG T +IGDPS + ++ R +  QE+ E  +EKI+G    F+ +  G   A M NN  
Sbjct: 67  PLVGGATGLIGDPSGK-KAERTLNEQEVVEGFVEKIQGQLQRFLDF-EGANAAEMKNNYD 124

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           WL S+   D LR++G  FSVN ML+ +SV SR+  +  +SF EF Y ILQ+YDF +L   
Sbjct: 125 WLGSMTLTDFLRDVGKHFSVNYMLAKDSVESRI--QTGISFTEFTYQILQSYDFHKLYTE 182

Query: 191 YDCRLQMGGSDQWGNIICGIDL------GERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
              +LQ+GGSDQWGNI  G++L      GE  + P  +  T PL+T A G K GK+  GA
Sbjct: 183 EQVKLQIGGSDQWGNITAGLELIRRLSGGEEGERPDAYGFTIPLVTKADGEKFGKSEGGA 242

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKII 302
           IWL+ E TSPY F+Q+  N DD+DV+ F K  T L   EID +     +  +E  A+K +
Sbjct: 243 IWLDPEKTSPYEFYQFLLNTDDSDVIRFLKYFTFLEKQEIDALETEVQERPHERQAQKKL 302

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMG----------- 351
           A E+T  VH     +KA       F      +      ++ DEV  G             
Sbjct: 303 AEELTRFVHDEAALDKAQNITNALFGGGDLKE------LTADEVQEGFKDVPGFEVDQPD 356

Query: 352 --LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
             LL ++V+A  A+S  +AR  +++ AI +N     + +  +   D        L  GKK
Sbjct: 357 KLLLDVLVEAKVASSKRQAREDIQNGAIYLNGDRCQDLQKTLGEDDKIDGAFTVLRRGKK 416

Query: 410 NHIICH 415
              + H
Sbjct: 417 KFFLIH 422


>gi|81428383|ref|YP_395383.1| tyrosyl-tRNA synthetase [Lactobacillus sakei subsp. sakei 23K]
 gi|97201513|sp|Q38XK7|SYY_LACSS RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|78610025|emb|CAI55073.1| Tyrosyl-tRNA synthetase [Lactobacillus sakei subsp. sakei 23K]
          Length = 419

 Score =  260 bits (664), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 152/424 (35%), Positives = 229/424 (54%), Gaps = 33/424 (7%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L+ R  I+Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  GH P 
Sbjct: 9   LTWRDAINQQTDADGLRELTEKKSISLYCGVDPTGDSMHIGHLIPFMMMKRFQLAGHHPY 68

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            ++GGGT  IGDPS R   R++   + +Q N+E + G       +G    +  M+NN  W
Sbjct: 69  IVIGGGTGSIGDPSGRKSERQLQTMEMVQHNVEALSGQMKRL--FGE-DANVSMVNNYDW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L  I  +D LR+ G  F++N ML+ + V SRL  +  +SF EF Y ILQ+ DF+ L K +
Sbjct: 126 LSKISLLDFLRDYGKLFNINTMLAKDVVASRL--DVGISFTEFTYQILQSVDFMHLYKAH 183

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLK--TPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
           D +LQ+GG+DQWGNI  GID+  +++    +++ LT PL+  A GTK GKT  GAIWL+ 
Sbjct: 184 DVQLQIGGADQWGNITSGIDMIHKIEGSETEVYGLTIPLMLKADGTKFGKTAGGAIWLDP 243

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIATEIT 307
           E T+PY F+Q+W N DD DVV + K  T L  +EI+ +AK      E  EA++ +A E+T
Sbjct: 244 EKTTPYEFYQFWLNQDDRDVVKYLKYFTFLDEAEINELAKTVETAPEKREAQRRLAEEVT 303

Query: 308 TMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIV 357
             VHG+ E E A       F   I +          Q  PT+ I+ ++ +    ++  +V
Sbjct: 304 RFVHGQAELEGAQKITEVLFSGDIKALDVKEAEQAFQKAPTVEITAEKKN----IVDFLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF-----GKKNHI 412
            AG  +S  +AR  +++ AI IN   +    L+I     D + N +  F     GKK + 
Sbjct: 360 DAGIESSKRQAREDVQNGAITINGDRLRETTLEI-----DPSENFEGKFVIVRRGKKKYF 414

Query: 413 ICHL 416
           +  +
Sbjct: 415 LARV 418


>gi|255037053|ref|YP_003087674.1| tyrosyl-tRNA synthetase [Dyadobacter fermentans DSM 18053]
 gi|254949809|gb|ACT94509.1| tyrosyl-tRNA synthetase [Dyadobacter fermentans DSM 18053]
          Length = 433

 Score =  260 bits (664), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 153/433 (35%), Positives = 230/433 (53%), Gaps = 32/433 (7%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           DF+  L  RG +H +  P   + L  + +   YIG+D TA SLH G+L  +MLL   Q+ 
Sbjct: 4   DFIEELRWRGMLHDMM-PGTHEQLQKE-MTCGYIGFDPTAPSLHIGNLATIMLLVHFQRA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKPI+L+GG T +IGDPSF+   R  +    ++ N E I+    SF+ + +G   A M+
Sbjct: 62  GHKPIALVGGATGMIGDPSFKAAERSFLDEDTLRINQEGIRKQLESFLDFNSGDNSAEMV 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I ++  LR+ G + SVN M+S +SV+ RL  E  +SF EF+Y +LQ YDF  
Sbjct: 122 NNYDWFKDIGFLQFLRDAGKYLSVNYMMSKDSVKKRL--ETGISFTEFSYQLLQGYDFYH 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP-----KLFALTSPLLTTASGTKMGKTL 241
           L K+ + RLQMGGSDQWGNI  G ++  R +       K +ALT+PL+T A G+K GK+ 
Sbjct: 180 LYKHKNVRLQMGGSDQWGNITTGTEIIRRKEGDDEGYFKAYALTTPLVTKADGSKFGKSE 239

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE--INEAK 299
            G IWL+ E TSPY F+Q+W N  D D+  + +  +     EI+ +      E  +   +
Sbjct: 240 GGNIWLDPERTSPYQFYQFWLNQSDDDMPRYLRVFSLKGREEIEALETSHAAEPHLRVMQ 299

Query: 300 KIIATEITTMVH----------------GREEAEKAATAAMECFDMSIHSQHMPTISISK 343
           K +A E+T  +H                G+   E   +  ++ FD       +P   IS+
Sbjct: 300 KALAAELTIRIHSEKAYQTVLKASEVLFGKATLETLQSIEIDEFDAIFDG--VPQTEISR 357

Query: 344 DEVSRGMGLLTL---IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG 400
           +E      +L L   + K+    S  EARR ++ NA+ +N   +++E   +         
Sbjct: 358 EEWDNAANVLDLVSTVTKSEIYPSKGEARRAIQQNAVSVNKVKVTSEAQVLSEFALLQDK 417

Query: 401 NIKLSFGKKNHII 413
            + +S GKKNH+I
Sbjct: 418 FLLISKGKKNHLI 430


>gi|224023478|ref|ZP_03641844.1| hypothetical protein BACCOPRO_00180 [Bacteroides coprophilus DSM
           18228]
 gi|224016700|gb|EEF74712.1| hypothetical protein BACCOPRO_00180 [Bacteroides coprophilus DSM
           18228]
          Length = 430

 Score =  259 bits (663), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 148/427 (34%), Positives = 225/427 (52%), Gaps = 22/427 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG +H +    E   L  + +VTAY+G D TA SLH GHL  +M+L   Q+ 
Sbjct: 2   NFVEELRWRGMVHTMMPGTEE--LLEKEMVTAYLGIDPTADSLHIGHLCGVMMLRHFQRC 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD-ALM 125
           GHKP++L+GG T +IGDPS + + R ++  + ++ N E IK     F+ + +   + A +
Sbjct: 60  GHKPLALVGGATGMIGDPSGKSQERNLLDEETLRHNQECIKKQLGKFLDFESDAPNKAEL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQAYD 183
           +NN  W+    ++D  R +G   +VN M++ ESV+ RL  E    LSF EF Y +LQ YD
Sbjct: 120 VNNYDWMKDFSFLDFARTVGKHITVNYMMAKESVQKRLNGEARDGLSFTEFTYQLLQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ L +  +C+LQ+GGSDQWGNI  G +L  R    +++ALT PL+T A G K GKT SG
Sbjct: 180 FLHLYETKNCKLQLGGSDQWGNITTGAELIRRTNGGEVYALTCPLITKADGGKFGKTESG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA--KLQGKEINEAKKI 301
            IWL+   TSPY F+Q+W N+ D D   + K  T+L   EID +     Q   +   +K 
Sbjct: 240 NIWLDPRYTSPYKFYQFWLNVSDEDAKRYIKIFTSLSKEEIDALTAEHEQAPHLRVLQKR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDEVS 347
           +A E+T MVH   +   A  A+   F  +                 + +P   +SK E+ 
Sbjct: 300 LAKEVTIMVHSEADYNAAVEASGILFGNATSDALKKLDEETLLSVFEGVPQFEVSKAEIE 359

Query: 348 RGMGLLTLIV-KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+  + L+  KA    S  E R+ ++   + +N   +      I   D      + +  
Sbjct: 360 AGIKAVDLLTEKAAVFPSKGEMRKLVQGGGVSLNKEKLGAFDQVITAADLLDKKYLLIQR 419

Query: 407 GKKNHII 413
           GKKN+ +
Sbjct: 420 GKKNYYL 426


>gi|311740481|ref|ZP_07714308.1| tyrosine--tRNA ligase [Corynebacterium pseudogenitalium ATCC 33035]
 gi|311304001|gb|EFQ80077.1| tyrosine--tRNA ligase [Corynebacterium pseudogenitalium ATCC 33035]
          Length = 419

 Score =  259 bits (663), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 151/411 (36%), Positives = 225/411 (54%), Gaps = 17/411 (4%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I+Q ++   L   C +  +  Y G+D T  SLHAGHL  L++L   Q  GH PI
Sbjct: 7   LQWRGLINQSTDLEALREAC-ENPIALYCGFDPTGDSLHAGHLVPLIMLRRFQNAGHHPI 65

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQE-IQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           +L GG T  IGDP  RD   R M S+E +  N+E IKG    FI +  G+  A M+NN  
Sbjct: 66  ALAGGATGFIGDP--RDVGERSMLSEEDLAHNLEAIKGQLRRFIDF-DGEQAATMVNNAD 122

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           W  ++  ID LR++G  FS+N ML  ++V+ RL+ +  +S+ EF+YM+LQ+ DFV+L + 
Sbjct: 123 WTMNMSVIDFLRDVGKNFSLNTMLDRDTVKRRLEGD-GISYTEFSYMLLQSNDFVQLRRE 181

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA-IWLNK 249
            DC LQ+GG DQWGNI+ G+DL  R+   K+  LT PL+T ASG K GK+  G  +WL+ 
Sbjct: 182 RDCVLQIGGGDQWGNIVSGVDLNRRIDGAKVHGLTVPLVTDASGQKFGKSTGGGKLWLDP 241

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIATEIT 307
           E TS Y+++QY+ N  D+ V+ + +  T L   EI    +   +E     A++ +A E+T
Sbjct: 242 EKTSAYSWYQYFLNAGDSVVIDYLRWFTFLTQEEIAEYERAVEEEPYKRAAQRRLAQEMT 301

Query: 308 TMVHGREEAEKAATAAMECF--------DMSIHSQHMPTISISKDEVSRGMGLLTLIVKA 359
            +VHG E  +    AA   F        D    +  +   ++++        ++ L+V +
Sbjct: 302 DLVHGEEATKAVELAAQALFGKAELSELDEKTLAGALSETTVAEVAAGEPRTIVDLLVAS 361

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
           G A S   ARR +K     +NN  I + + +   +D      + L  GKKN
Sbjct: 362 GLADSKGAARRTIKEGGAYVNNQRIESAEWEPSAEDLLHGSWLVLRRGKKN 412


>gi|323339390|ref|ZP_08079674.1| tyrosine--tRNA ligase [Lactobacillus ruminis ATCC 25644]
 gi|323093191|gb|EFZ35779.1| tyrosine--tRNA ligase [Lactobacillus ruminis ATCC 25644]
          Length = 418

 Score =  259 bits (663), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 149/400 (37%), Positives = 219/400 (54%), Gaps = 24/400 (6%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           ++ +  L  RG ++Q+S+   L  L  +  V  Y G D T  SLH GHL   M+L   Q 
Sbjct: 2   TNIIDELKWRGAVNQVSDEENLSKLLDEKSVGVYCGTDPTGDSLHVGHLIPFMMLKRFQL 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+   L+GGGT  IGDPS R   R +   +++  N E +    +S +K   G+ +  +
Sbjct: 62  AGHRAFILIGGGTGSIGDPSGRSTERTLQTMEQVHHNEEAL----TSQMKKLFGEDNITI 117

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  WL  I  +D LR+ G  F++N ML+ E V SRL  E  +SF EF Y ILQA DF 
Sbjct: 118 VNNHDWLSKISLLDFLRDYGKLFNINTMLNKEVVASRL--EVGISFTEFTYQILQAVDFH 175

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLK--TPKLFALTSPLLTTASGTKMGKTLSG 243
            L    D +LQ+GG+DQWGNI  GIDL  +++    + FALT PL+  A GTK GK+  G
Sbjct: 176 HLLLENDVQLQIGGADQWGNITAGIDLIHKMEGSDTQAFALTIPLMLKADGTKFGKSAGG 235

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKI 301
           A+WL+ E T+PY F+Q+W N DD DVV + K  T L   EI+ +AK      E  EA++ 
Sbjct: 236 AVWLDPEKTTPYEFYQFWLNQDDRDVVKYLKYFTFLGKEEIEELAKKVETEPEKREAQRR 295

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMG 351
           +A E+T  VHG+E   +A   +   F   +            ++MPT++++K+  +    
Sbjct: 296 LAEEVTEFVHGKEAVHQAEHISKALFSGEVKDLTADEIEQGFKNMPTVTVNKEPEN---- 351

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
           ++  +V +G   S  +AR  + + AI IN   I + +  I
Sbjct: 352 IVEWLVASGIEKSKRQAREDVTNGAIYINGDRIKDLEFMI 391


>gi|149275976|ref|ZP_01882121.1| tyrosyl-tRNA synthetase [Pedobacter sp. BAL39]
 gi|149233404|gb|EDM38778.1| tyrosyl-tRNA synthetase [Pedobacter sp. BAL39]
          Length = 428

 Score =  259 bits (663), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 143/429 (33%), Positives = 231/429 (53%), Gaps = 27/429 (6%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           ++F+  L  RG +  +    E  +  ++G+ + YIG+D TA SLH GHLTQ+M L   Q+
Sbjct: 2   TNFVEELRWRGMLQDMMPGTEEKL--NEGMTSGYIGFDPTADSLHVGHLTQIMTLIHFQR 59

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP +L+GG T ++GDPS + + R +   + +  N+  +K   S F+ + + +  A+M
Sbjct: 60  AGHKPYALVGGATGMVGDPSGKSDERNLQTEEMVAHNLAGMKRQLSKFLTFNSEENGAVM 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  W   +     +R++G   +VN M++ +SV+ RL+ +  LSF EF Y ++Q YDF 
Sbjct: 120 VNNADWFKDMSLFTFIRDVGKHITVNYMMAKDSVKRRLEGDSGLSFTEFCYQLIQGYDFY 179

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L KN +C +QMGGSDQWGNI+ G +L  R      FA+T+ L+  A GTK GKT SGA+
Sbjct: 180 YLWKNNNCLVQMGGSDQWGNIVTGTELIRRKDAGTAFAITTQLIKKADGTKFGKTESGAV 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEA------K 299
           WL+ E TSPY F+Q+W N  D D   + +  T     EI+ +     ++ NEA      +
Sbjct: 240 WLDPEKTSPYKFYQFWLNASDDDTKKWIRIFTLKTQEEIEILE----QQHNEAPHLRILQ 295

Query: 300 KIIATEITTMVHGREEAEKA--------ATAAMECFDMSIHSQ------HMPTISISKDE 345
           K +A +IT   H  E  E A           ++E F+    +Q       +P   I+K+E
Sbjct: 296 KALAEDITVRTHSAEALETAIKTSEFLFGNGSLEFFNTLTEAQVLEIFEGIPQYLIAKEE 355

Query: 346 VSRGMGLLTLIV-KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           ++ G+   T++  K     S  EA++ ++   + +N   I      + + D  +   + +
Sbjct: 356 LTAGIDAATILAEKTSVFPSKGEAKKTIQGGGVSLNKEKIKEASQLVSVADLLNDQFLIV 415

Query: 405 SFGKKNHII 413
             GKKN+ +
Sbjct: 416 QKGKKNYFL 424


>gi|239978757|ref|ZP_04701281.1| putative tyrosyl-tRNA synthetase [Streptomyces albus J1074]
 gi|291450647|ref|ZP_06590037.1| tyrosyl-tRNA synthetase [Streptomyces albus J1074]
 gi|291353596|gb|EFE80498.1| tyrosyl-tRNA synthetase [Streptomyces albus J1074]
          Length = 423

 Score =  259 bits (663), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 148/424 (34%), Positives = 228/424 (53%), Gaps = 13/424 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +D +  L  RG   Q ++   L    + G VT Y G+D TA+SLH GHL Q++ +  LQ+
Sbjct: 2   TDIVDELKWRGLFAQSTDEDALRKALADGPVTFYCGFDPTAASLHVGHLVQVLTMRRLQQ 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQE-IQENIEKIKGIFSSFIKYGTGKTDAL 124
            G +P++L+GG T  IGDP  R  + R + S E + E + +++     F+ +     +A 
Sbjct: 62  AGLRPLALVGGATGQIGDP--RPTAERTLNSPETVAEWVNRLRDQIEPFLDFDASLPNAA 119

Query: 125 -MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            M+NN  W  ++  I+ LR+IG  F VN+ML+ ESV  RL+ ++ +S+ EF+Y +LQ  D
Sbjct: 120 RMVNNLDWTANLSAIEFLRDIGKHFRVNKMLTKESVARRLESQEGISYTEFSYQLLQGMD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT-PKLFALTSPLLTTASGTKMGKTLS 242
           F++L +NY C LQ GGSDQWGN+  GIDL  RL+   ++ AL +PL+T A GTK GK+  
Sbjct: 180 FLQLYRNYGCTLQQGGSDQWGNLTAGIDLIHRLEPDAQVHALATPLMTKADGTKFGKSEG 239

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT--TLPMSEIDRMAKLQGKEINEAKK 300
           GAIWLN  MT+PY F+Q+W N DD DV  + + L+  +    E       +  +   A++
Sbjct: 240 GAIWLNASMTTPYAFYQFWLNTDDRDVSRYLRILSFRSREELEELEKVTEERPQARTAQR 299

Query: 301 IIATEITTMVHGREE------AEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLT 354
            +A E+TT+VHG +E      A KA     E  D+   +       +          ++ 
Sbjct: 300 ALAEELTTLVHGEDECRAVIAASKALFGQGELADLDAATLEAALYELPHVRADGFAPVVD 359

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           L+ + G   S + ARR +K     +NN  ++ E      +D      + +  GKKN    
Sbjct: 360 LLAETGLVASKSAARRTVKEGGAYVNNVKVTAEDAVPGPEDLLHGRWLVVRRGKKNLAAV 419

Query: 415 HLCG 418
            + G
Sbjct: 420 EITG 423


>gi|242280905|ref|YP_002993034.1| tyrosyl-tRNA synthetase [Desulfovibrio salexigens DSM 2638]
 gi|242123799|gb|ACS81495.1| tyrosyl-tRNA synthetase [Desulfovibrio salexigens DSM 2638]
          Length = 422

 Score =  259 bits (663), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 150/419 (35%), Positives = 232/419 (55%), Gaps = 18/419 (4%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I+Q+S+  ++           Y G+D TA SLH G+L  L+ L  +++ GH P+
Sbjct: 7   LKWRGLINQVSDEEKVREYLDTPGQYMYCGFDPTADSLHIGNLVPLLSLVRMKRAGHNPL 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+GG T  IGDPS +D+ R     ++++     I+    +F++  TG+  A ++NN  W
Sbjct: 67  FLLGGATGRIGDPSGKDKEREFTSIEKVESQAANIRTQIEAFVERNTGEK-AEVVNNYDW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYDFVELAKN 190
           +  I ++D+LR++G  FSVN M++ ESV+ R  R+   +S+ EF+YM+LQ+YDF  L   
Sbjct: 126 MKEISFLDMLRDVGKHFSVNWMMAKESVKGRFGRDDVGISYTEFSYMLLQSYDFYHLFNE 185

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKE 250
             C+LQ+GG DQWGNI  G +L  R    + FA+T PL+TTASG K GK+   A++LN E
Sbjct: 186 KGCQLQIGGGDQWGNITAGCELIRRKAQGEGFAVTFPLITTASGQKFGKSEGNAVFLNAE 245

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIATEITT 308
           +TSPY F+Q+W N DD DV+ F K  T L   EI  +AK   +   +  A K +A E T 
Sbjct: 246 LTSPYTFYQFWINTDDRDVIKFLKYFTFLTEEEIAEIAKEHEEAPHLRAAHKRLAEETTI 305

Query: 309 MVHGREEAEKAATAAMECFD----MSIHS-------QHMPTISISKDEVSRGMGLLTLIV 357
           M+HG+EE EK   A    F     MS+ +       +  P +  +K ++     L  +++
Sbjct: 306 MIHGKEELEKVQAATAALFGKGDIMSVDAATLRGAMEAAPGVEYAKADLPD---LPQILL 362

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             G   S  +AR+ ++   + INN  +++        DF     + +  GKKN+ +  L
Sbjct: 363 DLGMVKSKGQARKDIQGGGLYINNERVADFDYVPGDDDFIGGECMLIRKGKKNYGLVTL 421


>gi|86134694|ref|ZP_01053276.1| Tyrosyl-tRNA synthetase [Polaribacter sp. MED152]
 gi|85821557|gb|EAQ42704.1| Tyrosyl-tRNA synthetase [Polaribacter sp. MED152]
          Length = 430

 Score =  259 bits (662), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 148/428 (34%), Positives = 230/428 (53%), Gaps = 25/428 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG +H      E  +L  + + +AY+G+D TA SLH G+L  +MLL   Q+ 
Sbjct: 3   NFIEELQWRGMLHDSMPGTEEHLL--EEMRSAYVGFDPTADSLHIGNLVPIMLLAHYQRC 60

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG-KTDALM 125
           GH+PI+L+GG T +IGDPS +   R ++    ++ N E +K     F+ + +  K  A++
Sbjct: 61  GHRPIALVGGATGMIGDPSGKSAERNLLDETTLRHNQECVKAQLGHFLDFTSNEKNAAIL 120

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQAYD 183
           +NN  W+  I +++ +R+IG   +VN M++ +SV++R+  E    +SF EF Y ++Q YD
Sbjct: 121 VNNYDWMKDISFLEFIRDIGKHITVNYMMAKDSVKNRISSESKDGMSFTEFTYQMVQGYD 180

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ L +     +QMGGSDQWGNI  G +L  R+   K +A+T PL+T + G+K GK+  G
Sbjct: 181 FLHLFRENSTTIQMGGSDQWGNITTGTELIRRIGNGKGYAITCPLITKSDGSKFGKSEGG 240

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAK---K 300
            +WL+   TSPY F+QYW N  D D   + K  T L    ID +   + KE    +   K
Sbjct: 241 NVWLDANRTSPYKFYQYWLNTSDEDAEKYIKIFTFLDKETIDALVA-EHKEAPHTRILQK 299

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDEV 346
            +  E+T +VHG++E EKA  A+   F  S  S                +P  +++   V
Sbjct: 300 RLGEEVTVLVHGKDEYEKAIKASNILFGKSTASDLKSLDEKTLLDIFDGVPQATVTASLV 359

Query: 347 SRGMGLL-TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLS 405
             G+ ++  L  +  F  S  EARR LK NAI +N   +  E   I  +D      + L 
Sbjct: 360 ENGLDMIAALAAETNFLKSNGEARRALKENAISVNKEKVK-EDFVITKEDLIDKKYVLLQ 418

Query: 406 FGKKNHII 413
            GKK + +
Sbjct: 419 RGKKTYYL 426


>gi|256370627|ref|YP_003108452.1| tyrosyl-tRNA synthetase [Candidatus Sulcia muelleri SMDSEM]
 gi|256009419|gb|ACU52779.1| tyrosyl-tRNA synthetase [Candidatus Sulcia muelleri SMDSEM]
          Length = 427

 Score =  259 bits (662), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 154/412 (37%), Positives = 235/412 (57%), Gaps = 26/412 (6%)

Query: 15  RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLM 74
           RG IH  +  +++        +T Y G+D T+ SLH G+L  +++L   +++G+K IS++
Sbjct: 10  RGLIHNTTYSKKI----KNEKITLYTGFDPTSKSLHIGNLVAIIMLIHFKRSGNKIISVI 65

Query: 75  GGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCS 134
           GGGT +IGDPS ++  R +++ + +Q+NI+ IK   S F+ + + +    +LNN  WL  
Sbjct: 66  GGGTGMIGDPSGKNSERIIIKKESLQKNIKNIKKQLSFFLDFNSNE----ILNNYEWLKK 121

Query: 135 IKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCR 194
             +ID  ++IG +F +N MLS +S++ R+ ++ S+SF EF Y +LQAYDF+ L K  +C 
Sbjct: 122 TLFIDFAKDIGKYFPINYMLSKDSIKKRISKKNSISFTEFTYQLLQAYDFLYLYKKKNCS 181

Query: 195 LQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG-AIWLNKEMTS 253
           LQ+GGSDQWGNI  GI+L  +    K+  LT PL+T   G+K GKT  G  IW++  +TS
Sbjct: 182 LQIGGSDQWGNITSGIELIRKKLGIKVNGLTFPLITKLDGSKFGKTEKGDNIWIDPNLTS 241

Query: 254 PYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEA--KKIIATEITTMVH 311
           PY F+Q+W NI D     + K  T L   EI  +     K  N    +K IA+EIT  VH
Sbjct: 242 PYEFYQFWINISDDQAKKYIKIYTFLKKEEIKEIIFFHEKNPNLKLIQKKIASEITIFVH 301

Query: 312 GREEAEKAATAAMECF------------DMSIHSQHMPTISISKDEVSRGMGLLTLIV-K 358
           G++  EK    +   F            D+    +++P  ++  D ++  + +L L+V K
Sbjct: 302 GKKIFEKIKFISNILFKKEKILTNLSKNDIKSIYENIPHKNLFID-INFKIPILDLLVNK 360

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
           + F  S  EA RHLK N+I IN  II  E   +K +D  S   + L  GKKN
Sbjct: 361 SNFIKSKKEAIRHLKCNSILINKKIIK-ENFFLKKKDLISESYVLLQKGKKN 411


>gi|170781648|ref|YP_001709980.1| tyrosyl-tRNA synthetase [Clavibacter michiganensis subsp.
           sepedonicus]
 gi|169156216|emb|CAQ01358.1| tyrosyl-tRNA synthetase [Clavibacter michiganensis subsp.
           sepedonicus]
          Length = 442

 Score =  259 bits (662), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 140/389 (35%), Positives = 217/389 (55%), Gaps = 13/389 (3%)

Query: 2   PAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
           P+F+ D    +  RG++H  ++   L  L S   +T Y G+D TA SLH G+L QL+L+ 
Sbjct: 24  PSFE-DVWEEIVWRGYVHVSTDQDALKELLSGPPITYYCGFDPTAPSLHLGNLVQLVLMR 82

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI-QENIEKIKGIFSSFIKYGTGK 120
            LQ  GH+P+ L+GG T +IGDP  R  + R + + E+  E + +++   S+F+    G 
Sbjct: 83  RLQLAGHRPLGLVGGSTGLIGDP--RPTAERTLNTPEVVAEWVGRLQAQVSAFLS-PEGD 139

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               ++NN  W   +  ID LRE+G  F V  ML  ++V +RL  ++ +S+ EF+Y ILQ
Sbjct: 140 NAVRIVNNLDWTAPLSAIDFLREVGKHFRVGTMLKKDAVSARLNSDEGISYTEFSYQILQ 199

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
             DF EL + Y C LQ GGSDQWGN+  G DL  R +     A+ +PL+T + GTK GK+
Sbjct: 200 GLDFRELHRAYGCVLQTGGSDQWGNLTSGTDLIRRSERATAHAIGTPLITNSDGTKFGKS 259

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEA 298
              A+WL+ E+TSPY F+Q+W N DD DV+   +  T L  + I+ + +    E    EA
Sbjct: 260 EGNAVWLDPELTSPYAFYQFWLNTDDGDVIHRLRVFTFLDRARIEELERAVASEPFRREA 319

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDM----SIHSQHMPTI--SISKDEVSRGMGL 352
           ++ +A E+T++VHG E  E A  AA   F      ++    +  +   +   E++ G  +
Sbjct: 320 QRTLAWEVTSLVHGVEATESAIAAAQALFGQGELAALDEGTLEAVIRELPTAELAPGTTV 379

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINN 381
           +  +V  G  +S  EARR +    + +NN
Sbjct: 380 IQALVDTGLVSSAGEARRAITQGGVYVNN 408


>gi|256825073|ref|YP_003149033.1| tyrosyl-tRNA synthetase [Kytococcus sedentarius DSM 20547]
 gi|256688466|gb|ACV06268.1| tyrosyl-tRNA synthetase [Kytococcus sedentarius DSM 20547]
          Length = 442

 Score =  259 bits (662), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 151/407 (37%), Positives = 225/407 (55%), Gaps = 20/407 (4%)

Query: 3   AFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
           A  S  L+ L  RG I Q ++  ELD + + G V  YIG+D TA SLH G L QL+ +  
Sbjct: 21  AVLSGVLAELQWRGVIAQSTDLLELDRMLAAGPVHFYIGFDPTAPSLHVGSLVQLVTMRR 80

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQE-IQENIEKIKGIFSSFIKYGTGKT 121
           LQ+ GH P+ L+GG T +IGDP  R  S R +  +E +   ++ I      F+ +  G+ 
Sbjct: 81  LQEAGHIPVVLVGGSTGLIGDP--RPTSERNLHDRETVARWVDSIAQQVRPFVHF-EGEN 137

Query: 122 DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA 181
            A ++NN  W   +  +D LR++G  F VN+ML  ++V +RL+  Q +S+ EF+Y ILQ 
Sbjct: 138 AATVVNNLDWFGQLGALDFLRDVGKHFRVNQMLKKDAVSARLESSQGISYTEFSYQILQG 197

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
           YDF  L  +   RLQ+GG DQWGN++ G+D   R++   + ALT+PL+T ASG K GK+ 
Sbjct: 198 YDFWHLFTSLGVRLQVGGQDQWGNLMAGVDYVHRVEGESVHALTTPLVTEASGRKFGKSE 257

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE---- 297
             AIWL+  MTSP+ F Q+W N +D  VV + +  T L   +I   A+L+ +E+ E    
Sbjct: 258 GNAIWLDASMTSPWTFHQFWLNAEDEKVVEYLRLFTLLDREQI---AELE-REVAEAPFK 313

Query: 298 --AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQH------MPTISISKDEVSRG 349
             A++ +A E+TT+VHG E  +    AA   F      Q         T  ++  EV  G
Sbjct: 314 RTAQRALAREMTTLVHGAEITDGVEAAAEALFGKGDLQQVDAGVLLDATAELTGGEVEVG 373

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
              + ++V  GFA S   A+R L    I +N+  +++ +  I   DF
Sbjct: 374 TSWVDVVVAVGFADSRKAAKRLLGEGGISVNSQKVTDPEGAITDADF 420


>gi|255324652|ref|ZP_05365769.1| tyrosine--tRNA ligase [Corynebacterium tuberculostearicum SK141]
 gi|255298558|gb|EET77858.1| tyrosine--tRNA ligase [Corynebacterium tuberculostearicum SK141]
          Length = 419

 Score =  259 bits (662), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 151/411 (36%), Positives = 225/411 (54%), Gaps = 17/411 (4%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I+Q ++   L   C +  +  Y G+D T  SLHAGHL  L++L   Q  GH PI
Sbjct: 7   LQWRGLINQSTDLEALREAC-ENPIALYCGFDPTGDSLHAGHLVPLIMLRRFQNAGHHPI 65

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQE-IQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           +L GG T  IGDP  RD   R M S+E +  N+E IKG    FI +  G+  A M+NN  
Sbjct: 66  ALAGGATGFIGDP--RDVGERSMLSEEDLAHNLEAIKGQLRRFIDF-DGEQAATMVNNAD 122

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           W  ++  ID LR++G  FS+N ML  ++V+ RL+ +  +S+ EF+YM+LQ+ DFV+L + 
Sbjct: 123 WTMNMSVIDFLRDVGKNFSLNTMLDRDTVKRRLEGD-GISYTEFSYMLLQSNDFVQLRRE 181

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA-IWLNK 249
            DC LQ+GG DQWGNI+ G+DL  R+   K+  LT PL+T ASG K GK+  G  +WL+ 
Sbjct: 182 RDCVLQIGGGDQWGNIVSGVDLNRRIDGAKVHGLTVPLVTDASGQKFGKSTGGGKLWLDP 241

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIATEIT 307
           E TS Y+++QY+ N  D+ V+ + +  T L   EI    +   +E     A++ +A E+T
Sbjct: 242 EKTSAYSWYQYFLNAGDSVVIDYLRWFTFLTQEEIAEYERAVEEEPYKRAAQRRLAQEMT 301

Query: 308 TMVHGREEAEKAATAAMECF--------DMSIHSQHMPTISISKDEVSRGMGLLTLIVKA 359
            +VHG E  +    AA   F        D    +  +   ++++        ++ L+V +
Sbjct: 302 DLVHGEEATKAVELAAQALFGKAELSELDEKTLAGALSETTVAEIAAGEPRTIVDLLVAS 361

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
           G A S   ARR +K     +NN  I + + +   +D      + L  GKKN
Sbjct: 362 GLADSKGAARRTIKEGGAYVNNQRIESAEWEPSAEDLLHGSWLVLRRGKKN 412


>gi|330684055|gb|EGG95811.1| tyrosine--tRNA ligase [Staphylococcus epidermidis VCU121]
          Length = 420

 Score =  259 bits (662), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 138/379 (36%), Positives = 216/379 (56%), Gaps = 20/379 (5%)

Query: 15  RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLM 74
           RG I+Q ++   ++ L ++  VT Y G D TA SLH GHL   + L   Q+ GH+PI L+
Sbjct: 12  RGLIYQQTDEAGIEELLNKEQVTLYCGADPTADSLHIGHLLPFLTLRRFQEHGHRPIVLI 71

Query: 75  GGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCS 134
           GGGT +IGDPS + E R +   ++++ N++ I        ++GT K  A+++NN+ WL  
Sbjct: 72  GGGTGMIGDPSGKSEERVLQTEEQVEANVQGISNQMHKLFEFGTDKG-AVLVNNKDWLGQ 130

Query: 135 IKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCR 194
           I  I  LR+ G    VN ML  +S+++RL  E  +S+ EF Y ILQA DF  L +  +C+
Sbjct: 131 ISLISFLRDYGKHVGVNYMLGKDSIQTRL--EHGISYTEFTYTILQAIDFGHLNRELNCK 188

Query: 195 LQMGGSDQWGNIICGIDLGERL-KTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTS 253
           +Q+GGSDQWGNI  GI+L  R+    + + LT PL+T + G K GK+ SGA+WL+ + TS
Sbjct: 189 IQVGGSDQWGNITSGIELMRRMYGQTEAYGLTIPLVTKSDGKKFGKSESGAVWLDADKTS 248

Query: 254 PYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKKIIATEITTMVH 311
           PY F+Q+W N  D DV+ F K  T L   EI+++  +K +     EA+K +A  +T  +H
Sbjct: 249 PYEFYQFWINQSDEDVIKFLKYFTFLSKEEINQLEQSKEEAPHKREAQKALAENVTRFIH 308

Query: 312 GREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIVKAGF 361
           G +    A   +   F   + S          + +P + +SK+  +    ++  +++ G 
Sbjct: 309 GEDALNDAIRISQALFSGDLKSLSAKELKEGFKDVPQVELSKNTTN----IIDALIETGI 364

Query: 362 ATSTNEARRHLKSNAIKIN 380
            +S  +AR  + + AI IN
Sbjct: 365 GSSKRQAREDVNNGAIYIN 383


>gi|308800504|ref|XP_003075033.1| TyrS Tyrosyl-tRNA synthetase, probable (IC) [Ostreococcus tauri]
 gi|119358861|emb|CAL52305.2| TyrS Tyrosyl-tRNA synthetase, probable (IC) [Ostreococcus tauri]
          Length = 488

 Score =  259 bits (662), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 148/429 (34%), Positives = 233/429 (54%), Gaps = 18/429 (4%)

Query: 3   AFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
           A   D ++ L  RG     ++   L     Q  +  Y G+D TA SLH G+L  +++L W
Sbjct: 59  ASDEDLITTLKARGLFDSCTDETSL-AEALQKPLKVYCGFDPTADSLHLGNLLGIVVLSW 117

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD 122
            Q+ GH+PI L+GG T  +GDPS + + R ++    +  N+  I       +        
Sbjct: 118 FQRKGHRPIILVGGATGRVGDPSGKSQERPLLDEATLSTNVAAISNSVLRILTRAASNPA 177

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
            ++L+N  W  +I  +D LR++G +  +  MLS +SV+SRL     LSF EF+Y +LQ Y
Sbjct: 178 VVVLDNYDWFRNITLLDFLRDVGKYARLGNMLSKDSVKSRLDGGVGLSFTEFSYQLLQGY 237

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGER-LKTPKLFALTSPLLTTASGTKMGKTL 241
           DF+ L +N    +Q+GGSDQWGNI  G +L  R L+    + LT PLL  + GTK GK+ 
Sbjct: 238 DFMHLFRNECVSVQIGGSDQWGNITAGTELVRRVLREEGAYGLTFPLLLKSDGTKFGKSA 297

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI----DRMAKLQGKEINE 297
           SGAIWL+KE  SPY+F+QY  N  D DV+   + LT L + EI      MA+  G   N 
Sbjct: 298 SGAIWLSKEKLSPYHFYQYLLNTADGDVIRLLRMLTFLSLDEIASIEGSMAE-AGYIPNT 356

Query: 298 AKKIIATEITTMVHGREEAEKAATA----------AMECFDMSIHSQHMPTISISKDEVS 347
           A++I+A E+T  VHG++  ++A  A           ++   + + S  +P+++IS+  V 
Sbjct: 357 AQQILAAEVTRFVHGQDGLDEAIRATESLRPGTETVLDAAALELASDTIPSVAISRVAVV 416

Query: 348 RGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFG 407
             + +  ++V +G   S   A+R L++  I++NN+ +++E   I   D      + L+ G
Sbjct: 417 DNL-VTDVVVVSGLLESKGAAKRMLRNGGIRVNNNKVTDETRTIVEGDIIGDNMLLLAAG 475

Query: 408 KKNHIICHL 416
           KKN ++  L
Sbjct: 476 KKNKLLIRL 484


>gi|315282536|ref|ZP_07870926.1| tyrosyl-tRNA synthetase [Listeria marthii FSL S4-120]
 gi|313613817|gb|EFR87571.1| tyrosyl-tRNA synthetase [Listeria marthii FSL S4-120]
          Length = 429

 Score =  259 bits (662), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 151/383 (39%), Positives = 209/383 (54%), Gaps = 21/383 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I+Q ++   L     +  ++ Y G D +  S+H GHL   M+L   Q  GH+PI
Sbjct: 17  LEWRGAIYQQTDEEGLRKWVEEKQISLYCGIDPSGDSMHIGHLIPFMILRRFQNAGHRPI 76

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+GG T  IGDPS + E R++   ++I +N+E ++        +  G + A M+NN  W
Sbjct: 77  ILVGGATGTIGDPSGKKEERQLQSMEQISKNVESLRVQLGKIFDF-EGDSAASMVNNYDW 135

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
              +  +D LR+ G  F+VN MLS + V SRL  E  +SF EF Y ILQA DF  L +  
Sbjct: 136 TKDVSILDFLRDYGKEFNVNTMLSKDIVASRL--EVGISFTEFAYQILQAMDFNHLYEFN 193

Query: 192 DCRLQMGGSDQWGNIICGIDL--GERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
           DCRLQ+GGSDQWGNI  G+DL   ++ +  K F LT PLLT A GTK GK+  GAIWLN 
Sbjct: 194 DCRLQIGGSDQWGNITAGLDLIRKKQGENAKAFGLTIPLLTKADGTKFGKSEGGAIWLNP 253

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE--INEAKKIIATEIT 307
           E T+PY F+Q+W N DD DVV + K  T L  +EI  +AK    E  +  A+K +A E+T
Sbjct: 254 EKTTPYEFYQFWINTDDRDVVKYLKYFTFLTEAEIAELAKQVETEPHLRAAQKTLAAEMT 313

Query: 308 TMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIV 357
             VH  E  E+A   +   F   + +          + +PT      EV+    L+  +V
Sbjct: 314 KFVHSEEALEQALKISKALFSGDVKALTADEIEQGFKDVPTFVAEDAEVN----LVDWLV 369

Query: 358 KAGFATSTNEARRHLKSNAIKIN 380
             G   S  +AR  + + AI IN
Sbjct: 370 TLGIEPSKRQAREDVGNGAIYIN 392


>gi|185535515|gb|ACC77865.1| tyrosyl-tRNA synthetase [Staphylococcus xylosus]
          Length = 420

 Score =  259 bits (662), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 139/386 (36%), Positives = 218/386 (56%), Gaps = 20/386 (5%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L  RG ++Q ++   ++ + ++  VT Y G D TA SLH GHL   + L   Q+ G
Sbjct: 5   LLEDLKWRGLVYQQTDESGIEEILNKEQVTLYCGADPTADSLHIGHLLPFLTLRRFQEHG 64

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+P+ L+GGGT +IGDPS + E R++    +++ N++ I        ++GT K  A ++N
Sbjct: 65  HRPLVLIGGGTGMIGDPSGKSEERKLQTEDQVEVNVQGISNQMHKIFEFGTEKG-AKLVN 123

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N+ WL  I  ID LR+ G    VN ML+ +S+++RL  E  +SF EF Y ILQA DF  L
Sbjct: 124 NKDWLGQISLIDFLRDYGKHVGVNYMLAKDSIQTRL--EHGISFTEFTYTILQAIDFGHL 181

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERL-KTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
            K ++C++Q+GGSDQWGNI  GI+L  R+    + + LT PL+  + G K GKT  GA+W
Sbjct: 182 NKTFNCKIQVGGSDQWGNITSGIELMRRMYGQTEAYGLTIPLVVKSDGKKFGKTEGGAVW 241

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIAT 304
           L+   TSPY F+Q+W N  D DV+ F K  T L   EI+ + K   +   + EA+K +A 
Sbjct: 242 LDASKTSPYEFYQFWINTTDDDVIKFLKYFTFLEKEEIEALEKSLNEAPHLREAQKALAE 301

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLT 354
            +T  +HG+   + A   +   F   + S          + +P + ++ +  +    ++ 
Sbjct: 302 NVTRFIHGQAALDDAIRISKALFAGDLQSLSAMELKEGFKDVPQVELNHETTN----IVE 357

Query: 355 LIVKAGFATSTNEARRHLKSNAIKIN 380
            IV++G ++S  +AR  + + AI IN
Sbjct: 358 AIVESGISSSKRQAREDVNNGAIYIN 383


>gi|227505064|ref|ZP_03935113.1| tyrosine--tRNA ligase [Corynebacterium striatum ATCC 6940]
 gi|227198352|gb|EEI78400.1| tyrosine--tRNA ligase [Corynebacterium striatum ATCC 6940]
          Length = 419

 Score =  259 bits (661), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 153/418 (36%), Positives = 234/418 (55%), Gaps = 17/418 (4%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           LS RG I+Q ++   L   C +  +T Y G+D T  SLHAGHL  +++L   Q+ GH+PI
Sbjct: 7   LSWRGLINQSTDLEALRDECEK-PITLYCGFDPTGDSLHAGHLVPMIMLRRFQQFGHRPI 65

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQE-IQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           ++ GG T  IGDP  RD   R M S E I++N++ I+     F+ +  G   A+M+NN  
Sbjct: 66  TVAGGATGTIGDP--RDVGERSMLSMETIEQNLQAIQKQLRRFVDF-EGDNPAIMVNNAD 122

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           W  ++  I+ LR++G  FS+N ML  ++V+ RL+ +  +S+ EF+YM+LQ+ D+V L + 
Sbjct: 123 WTMNMSVIEFLRDVGKNFSLNTMLDRDTVKRRLESD-GISYTEFSYMLLQSNDYVHLHRE 181

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA-IWLNK 249
           YDC LQ+GG DQWGNI+ G+DL  R+   K+ ALT PL+T ASG K GK+  G  +WL+ 
Sbjct: 182 YDCVLQIGGGDQWGNIVFGVDLNRRMDNAKVHALTVPLVTDASGQKFGKSTGGGKLWLDP 241

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIATEIT 307
           E TS Y+++QY+ N  D  V+ + +  T L   EI    K   +E     A++ +A E+T
Sbjct: 242 EKTSAYSWYQYFLNAGDTVVIDYLRWFTFLTQEEIAEYEKAVAEEPFKRAAQRRLAQEMT 301

Query: 308 TMVHGREEAEKAATAAMECF---DMSIHSQHMPTISISKDEVSR-GMG----LLTLIVKA 359
            +VHG +  +    AA   F   ++S   +     ++++  V+  G G     + L+V +
Sbjct: 302 NLVHGEDATKAVELAAQALFGKAELSDLDEKTLAGALAETTVAEIGEGEPRTAVDLLVAS 361

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           G A S   ARR +K     INN  + +E  +   +D      + L  GKKN     L 
Sbjct: 362 GLADSKGAARRTIKEGGAYINNQRVESEDWEPSSEDLLHGAWLVLRRGKKNFAGARLA 419


>gi|118464949|ref|YP_882266.1| tyrosyl-tRNA synthetase [Mycobacterium avium 104]
 gi|118166236|gb|ABK67133.1| tyrosyl-tRNA synthetase [Mycobacterium avium 104]
          Length = 421

 Score =  259 bits (661), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 152/418 (36%), Positives = 232/418 (55%), Gaps = 26/418 (6%)

Query: 11  ILSERGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
           IL E G+   I+   +LD L ++   +T Y G+D TA SLHAGHL  L+ L   Q+ GH+
Sbjct: 5   ILDELGWRGLIAQSTDLDALAAEARPMTVYAGFDPTAPSLHAGHLVPLLALRRFQRAGHR 64

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQE-IQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           PI L GG T +IGDP  RD   R +   + + E  E+I+G    F+ +    T A+++NN
Sbjct: 65  PIVLAGGATGMIGDP--RDVGERTLNEADTVAEWTERIRGQLERFVDFDESATGAVVVNN 122

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             W   +  I+ LR++G  FSVN ML  ++VR RL+ +  +S+ EF+YM+LQA D+VEL 
Sbjct: 123 LDWTRQLSAIEFLRDLGKHFSVNVMLDRDTVRRRLEGD-GISYTEFSYMLLQANDYVELH 181

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK-TLSGAIWL 247
           + Y C LQ+GGSDQWGNII G+ L  +     + ALT PL+T A GTK GK T  G++WL
Sbjct: 182 RRYGCVLQIGGSDQWGNIIAGVRLVRQKLGATVHALTVPLVTAADGTKFGKSTGGGSLWL 241

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATE 305
           +  +T+PY ++QY+ N  DADV+ + +  T L   E+  + +   +   +  A++ +A E
Sbjct: 242 DPALTTPYAWYQYFFNTADADVIRYLRWFTFLSADELGELERATAERPQQRAAQRRLARE 301

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQ-------------HMPTISISKDEVSRGMGL 352
           +T +VHG     +AAT A+E    ++  Q              +   S+++ +     G+
Sbjct: 302 LTVLVHG-----EAATEAVEHASRALFGQGELERLDAATLAAALRETSVAELKPGAPDGI 356

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
           + L+V +G + S   ARR L    + +NN  I  E    +  DF     + L  GK+ 
Sbjct: 357 VDLLVASGLSESRKAARRTLGEGGVSVNNVRIDREDWAPQPSDFLHGKWLVLRRGKRT 414


>gi|145594448|ref|YP_001158745.1| tyrosyl-tRNA synthetase [Salinispora tropica CNB-440]
 gi|145303785|gb|ABP54367.1| tyrosyl-tRNA synthetase [Salinispora tropica CNB-440]
          Length = 428

 Score =  259 bits (661), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 146/421 (34%), Positives = 223/421 (52%), Gaps = 20/421 (4%)

Query: 2   PAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
           P  +      L  RG I   +   EL  L        Y+G+D TASSLH G L Q++   
Sbjct: 8   PQGRDTLFDDLRWRGLIQDSTGLDELRALLDGPGAAFYVGFDPTASSLHVGSLMQVVTAR 67

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN-IEKIKGIFSSFIKYGTGK 120
            LQ  GH+P+ L+GG T  IGDP  ++ + R++ S E+    + +I+   + F+ Y  G 
Sbjct: 68  RLQLAGHRPLLLVGGATGQIGDP--KESAERVLNSPEVVAGWVARIRDQLAPFVSY-QGA 124

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
             A ++NN  W   +  ++ LR++G  F VNRML+ E VR+RL  E  +SF EF+Y +LQ
Sbjct: 125 NAAQLVNNLDWTGEMSVVEFLRDVGKHFPVNRMLAREVVRARL--ESGISFTEFSYQLLQ 182

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           A DF EL + + C+LQ GGSDQWGNI  G+D   R     + A T+PL+T + GTK GKT
Sbjct: 183 ANDFFELHRRHGCQLQFGGSDQWGNITAGVDYIRRRGAGPVEAFTTPLVTKSDGTKFGKT 242

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE--INEA 298
             GA+WL+ E+TSPY F+Q+W N +D DV  + +  +  P +E++ + K   +      A
Sbjct: 243 EGGAVWLDPELTSPYAFYQFWVNAEDRDVARYLRYFSFRPRAELEALEKEAAERPAARVA 302

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI---------SISKDEVSRG 349
           ++ +A E+TT+VHG  E  +   A+   F     +   P            +  DE+   
Sbjct: 303 QRALAEELTTLVHGEREMAQVVAASQALFGRGSLADLSPATLRAALTEAGLVHLDELPDV 362

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
           +GLL    ++G   S  EARR +      +NN+ +S+ +  +   D      + L  GK+
Sbjct: 363 VGLLK---ESGLVPSNKEARRVIAEGGAYLNNNRVSSTEATVAPADLLHDRYLVLRRGKR 419

Query: 410 N 410
           +
Sbjct: 420 S 420


>gi|254775534|ref|ZP_05217050.1| tyrosyl-tRNA synthetase [Mycobacterium avium subsp. avium ATCC
           25291]
          Length = 421

 Score =  259 bits (661), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 152/418 (36%), Positives = 232/418 (55%), Gaps = 26/418 (6%)

Query: 11  ILSERGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
           IL E G+   I+   +LD L ++   +T Y G+D TA SLHAGHL  L+ L   Q+ GH+
Sbjct: 5   ILDELGWRGLIAQSTDLDALAAEARPMTVYAGFDPTAPSLHAGHLVPLLALRRFQRAGHR 64

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQE-IQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           PI L GG T +IGDP  RD   R +   + + E  E+I+G    F+ +    T A+++NN
Sbjct: 65  PIVLAGGATGMIGDP--RDVGERTLNEADTVAEWTERIRGQLERFVDFDESATGAVVVNN 122

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             W   +  I+ LR++G  FSVN ML  ++VR RL+ +  +S+ EF+YM+LQA D+VEL 
Sbjct: 123 LDWTRRLSAIEFLRDLGKHFSVNVMLDRDTVRRRLEGD-GISYTEFSYMLLQANDYVELH 181

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK-TLSGAIWL 247
           + Y C LQ+GGSDQWGNII G+ L  +     + ALT PL+T A GTK GK T  G++WL
Sbjct: 182 RRYGCVLQIGGSDQWGNIIAGVRLVRQKLGATVHALTVPLVTAADGTKFGKSTGGGSLWL 241

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATE 305
           +  +T+PY ++QY+ N  DADV+ + +  T L   E+  + +   +   +  A++ +A E
Sbjct: 242 DPALTTPYAWYQYFFNTADADVIRYLRWFTFLSADELGELERATAERPQQRAAQRRLARE 301

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQ-------------HMPTISISKDEVSRGMGL 352
           +T +VHG     +AAT A+E    ++  Q              +   S+++ +     G+
Sbjct: 302 LTVLVHG-----EAATEAVEHASRALFGQGELERLDAATLAAALRETSVAELKPGAPDGI 356

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
           + L+V +G + S   ARR L    + +NN  I  E    +  DF     + L  GK+ 
Sbjct: 357 VDLLVASGLSESRKAARRTLGEGGVSVNNVRIDREDWAPQPSDFLHGKWLVLRRGKRT 414


>gi|300781253|ref|ZP_07091107.1| tyrosine--tRNA ligase [Corynebacterium genitalium ATCC 33030]
 gi|300532960|gb|EFK54021.1| tyrosine--tRNA ligase [Corynebacterium genitalium ATCC 33030]
          Length = 421

 Score =  259 bits (661), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 154/426 (36%), Positives = 238/426 (55%), Gaps = 19/426 (4%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGV--VTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           ++ +  L  RG ++Q ++   L+ L  Q    +T Y G+D T  SLHAGHL  L++L   
Sbjct: 2   ANIIDELQWRGLVNQSTD---LEALKDQTANPITLYAGFDPTGPSLHAGHLVPLLMLRRF 58

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q+ GH+PI L GG T +IGDP    E R M  +  +++  ++I G    F+ +  G   A
Sbjct: 59  QEAGHRPIVLAGGATGLIGDPREVGE-RSMNTADTVEDWAQRITGQLQRFVSF-EGDNAA 116

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           +++NN  W   +  I  LR+IG  FS++ MLS E+V+ RL+ +  +S+ EF+YM+LQA D
Sbjct: 117 VLVNNAEWTNDMSVISFLRDIGKHFSLSTMLSRETVKRRLEGD-GISYTEFSYMLLQAND 175

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK-TLS 242
           FV+L + +DC LQ+GGSDQWGN++ G+DL  R+    + ALT PL+T + G K GK T  
Sbjct: 176 FVQLRRRHDCMLQIGGSDQWGNLVAGVDLNRRVDGASVHALTVPLVTDSEGKKFGKSTGG 235

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM-AKLQGKEIN-EAKK 300
           G++WL+ EMTSPY ++QY+ N  DADV+ + +  T L   E+  M  +++ +    EA+K
Sbjct: 236 GSLWLDPEMTSPYRWYQYFVNTADADVIRYLRWFTFLTQDELAEMETEVEERPFKREAQK 295

Query: 301 IIATEITTMVHGREEAEKAATAAMECF---DMSIHSQHMPTISISKD---EVSRGMG--L 352
            +A E+T +VHG E  +    A+   F   ++S   +     ++S+    EV  G    +
Sbjct: 296 RLAQEMTDLVHGPEATKAVELASQALFGRAELSELDEQTLAAAVSETDVFEVEAGAPRTI 355

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           + L+V  G   S   ARR +K      NN  I +E  +   +D      + L  GKKN  
Sbjct: 356 VDLLVGTGLVDSKGAARRAIKEGGAYANNERIESEGWEPAAEDLLHGSWVVLRRGKKNFA 415

Query: 413 ICHLCG 418
              + G
Sbjct: 416 GVKVHG 421


>gi|302822525|ref|XP_002992920.1| hypothetical protein SELMODRAFT_136175 [Selaginella moellendorffii]
 gi|300139265|gb|EFJ06009.1| hypothetical protein SELMODRAFT_136175 [Selaginella moellendorffii]
          Length = 467

 Score =  259 bits (661), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 144/426 (33%), Positives = 233/426 (54%), Gaps = 22/426 (5%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           + + + IL +RG +  I+    L   C +  +  Y G+D TA SLH G+L  +++L W Q
Sbjct: 49  RRNVVEILEQRGLVESIAG-ESLKKACDEKPIKVYCGFDPTAESLHLGNLLGIVVLEWFQ 107

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + GH+ ++L+GG T  IGDPS +   R +M    I++N + I+ + +  ++       A+
Sbjct: 108 RCGHETVALLGGATGRIGDPSGKSAERPVMDEATIEKNTQGIQALLTEILQ-----QKAV 162

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           +LNN  W      ++ LR++G F  V  M++ ESV+ RL  E+ +SF EF Y +LQ YDF
Sbjct: 163 VLNNYDWWKEFSLLEFLRDVGKFARVGTMVAKESVKRRLASEEGISFTEFTYQLLQGYDF 222

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGER-LKTPKLFALTSPLLTTASGTKMGKTLSG 243
           V L K+    +Q+GGSDQWGNI  GIDL  + L+    + LT PLL  + GTK GK+  G
Sbjct: 223 VHLYKSNGVSVQIGGSDQWGNITAGIDLVRKLLQRDDAYGLTFPLLVKSDGTKFGKSEGG 282

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL---QGKEINEAKK 300
           A+WL+ +  SPY+F+Q+     D+DV+   + LT + + EI+ + K     G   N A++
Sbjct: 283 AVWLSSKFLSPYHFYQHLFATPDSDVIKMLRMLTFVELEEIEALEKSMSEPGYVANTAQR 342

Query: 301 IIATEITTMVHGREEAEKA----------ATAAMECFDMSIHSQHMPTISISKDEVSRGM 350
            +A E+T  VHG +  E+A          +T  ++   +   S+ +P+ ++    V   +
Sbjct: 343 RLAEEVTRFVHGEDGLEEALKVTQALSPGSTTTLDWTAIEAISRDVPSCTLDSSVVVGPV 402

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
             + L V  G A S   ARR +K   I +NN+ + +E+L +   D      + LS GKKN
Sbjct: 403 --VDLCVSCGLAPSKAVARRLIKQGGIYMNNAKVDDERLLVAESDIIDGKMLLLSAGKKN 460

Query: 411 HIICHL 416
            ++  +
Sbjct: 461 KMVVRI 466


>gi|304386058|ref|ZP_07368399.1| tyrosine--tRNA ligase [Pediococcus acidilactici DSM 20284]
 gi|304327981|gb|EFL95206.1| tyrosine--tRNA ligase [Pediococcus acidilactici DSM 20284]
          Length = 417

 Score =  259 bits (661), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 153/424 (36%), Positives = 224/424 (52%), Gaps = 33/424 (7%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I+Q ++   L  L  +  +  Y G D T  S+H GHL   M+L   Q+ GHKP+
Sbjct: 7   LDWRGAINQQTDEEGLKKLTEEKSIGLYAGIDPTGDSMHIGHLIPFMVLKRFQQAGHKPV 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+GGGT  IGDPS +   R +   +++  N E +K     F     G  +  ++NN  W
Sbjct: 67  ILIGGGTGSIGDPSGKKSERVLQSMEQVHHNEEALKKQLVKFF----GTDNFRIVNNYDW 122

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L  +  +D LR+ G  F+VN ML+ + V SRL  E  +SF EF Y ILQ+ DF+ L K+ 
Sbjct: 123 LSKMSLLDFLRDYGKLFNVNTMLAKDIVASRL--EVGISFTEFTYQILQSVDFLHLYKHE 180

Query: 192 DCRLQMGGSDQWGNIICGIDLGERL--KTPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
           D +LQ+GG DQWGNI  G DL  R+  +  K++ LT PLL  A GTK GK+  G +WL+ 
Sbjct: 181 DVQLQIGGGDQWGNITAGTDLIHRMEGQDAKVYGLTIPLLLKADGTKFGKSEGGNVWLDP 240

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIATEIT 307
           E T+PY F+Q+W N DD DVV F K  T L   EI+R+A+      E  EA++ +A E+T
Sbjct: 241 EKTTPYEFYQFWLNQDDRDVVKFLKYFTFLSHEEIERLAETVKTAPEKREAQRRLAEEVT 300

Query: 308 TMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIV 357
             VHG+   E+A   +   F   +            ++MP++ +   E  +   +L L+ 
Sbjct: 301 EFVHGKAAVEEAQHISAALFSGDVKDLTASEIEQGFKNMPSVEV---ENKKENIVLWLVD 357

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF-----GKKNHI 412
                 S  +AR  +K+ AI+IN   I++   +I     D T +    F     GKK + 
Sbjct: 358 TTKIEPSRRQAREDIKNGAIRINGEKITDVDAEI-----DPTSHFDGKFVIVRRGKKKYF 412

Query: 413 ICHL 416
           +  +
Sbjct: 413 LARV 416


>gi|172058244|ref|YP_001814704.1| tyrosyl-tRNA synthetase [Exiguobacterium sibiricum 255-15]
 gi|171990765|gb|ACB61687.1| tyrosyl-tRNA synthetase [Exiguobacterium sibiricum 255-15]
          Length = 415

 Score =  259 bits (661), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 151/417 (36%), Positives = 230/417 (55%), Gaps = 15/417 (3%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L  RG I Q+++   +  L S    T Y G+D TA SLH GHL  +++L   Q+ G
Sbjct: 3   LLEDLEFRGLISQMTDEEGIKELLSS-PTTLYTGFDPTADSLHIGHLLPILVLRRFQEAG 61

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H  I L+GG T +IGDPS R   R +  S  ++E   +IKG  S F+    G+    + N
Sbjct: 62  HHAIGLVGGATGMIGDPSGRSTERSLNTSDIVEEFANRIKGQLSRFLPL-DGENPVTIAN 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W   +  ID LR+IG  F ++ ML+ +SV SRL  +  +SF EF+YM+LQ++DF++L
Sbjct: 121 NLDWTKDLTIIDFLRDIGKHFPISYMLAKDSVDSRL--QNGISFTEFSYMLLQSFDFLKL 178

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERL-KTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
            +N  CRLQ+GGSDQWGNI  G++L  R+    K F +T PL+T + G K GKT  GA+W
Sbjct: 179 YENEGCRLQVGGSDQWGNITAGMELIRRVGHDQKAFGITVPLVTKSDGQKFGKTAGGAVW 238

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIAT 304
           L+ + T+PY F+Q+W N+DD DV+ F K  T L   EI+ + +      E   A++ +A 
Sbjct: 239 LDADKTTPYEFYQFWFNVDDLDVIKFLKYFTFLTPDEINALQQEVETAPEKRVAQRRLAE 298

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS-----ISKDEVSRGMGLLTLIVKA 359
           E+T +VHG E  E++       F   I S     I+     + +  +     L+ ++V+A
Sbjct: 299 EMTVLVHGAEALEQSERITKALFSGEIKSLKAEDIADAFKGMPRFTLGEATNLVDILVEA 358

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK-LSFGKKNHIICH 415
             + S  +AR  + + AI IN      ++L  ++   D+ G+   +  GKK + +  
Sbjct: 359 KISPSKRQAREDVTNGAIYINGD--REQELTKEITKQDAIGDFTIIRRGKKKYFVLE 413


>gi|325102913|ref|YP_004272567.1| tyrosyl-tRNA synthetase [Pedobacter saltans DSM 12145]
 gi|324971761|gb|ADY50745.1| tyrosyl-tRNA synthetase [Pedobacter saltans DSM 12145]
          Length = 427

 Score =  258 bits (660), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 141/429 (32%), Positives = 230/429 (53%), Gaps = 27/429 (6%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG I  I    E ++  S+G+V+ YIG+D TA SLH G L+Q+  L   Q+ 
Sbjct: 2   NFVEDLRWRGLIQDIMPGTEEEL--SKGMVSGYIGFDPTAESLHVGSLSQIFTLVRFQQA 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP++L+GG T +IGDP+ + + R ++  +E+ +N++ I+     F+ +  G   A ++
Sbjct: 60  GHKPLALVGGATGMIGDPTGKSQERNLLSEEELAKNLKGIQKQLEQFLDFDCGANSAEIV 119

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W  +  ++D +R+ G   +VN M++ +SV+ RL+ E  +SF EF Y ++Q +DF  
Sbjct: 120 NNYDWFKNYSFLDFIRDAGKHITVNYMMAKDSVKKRLESEVGMSFTEFTYQLIQGFDFYH 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L K  + +LQMGGSDQWGNI+ G +   R    + FALTSPL+  A GTK GKT  G IW
Sbjct: 180 LWKERNVKLQMGGSDQWGNIVTGTEFIRRKAQGQAFALTSPLIKKADGTKFGKTEGGNIW 239

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKKIIAT 304
           L+ + TSPY F+Q+W N  D DV ++ K  T +   E+D +     Q   +   +K +A 
Sbjct: 240 LDPKRTSPYQFYQFWLNATDEDVKNYIKIFTFMTKEEVDALIAEHDQAPHLRVLQKSLAE 299

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDE------------------V 346
           +IT  VHG    E+A   A++  D    +  +  ++   DE                  +
Sbjct: 300 DITRRVHG----EQALQTALKTTDFLFGNGSLEFLNALSDEEVIGVFEGIAQFKVDRSAI 355

Query: 347 SRGMGLLTLIV-KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLS 405
             G+ +++L+  K     S  EA++ ++   + IN   +    + +   +  +   I   
Sbjct: 356 DSGVDVVSLLAEKTQIFPSKGEAKKMIQGGGVSINREKVGGPDVIVSTANLVNNKFIVAQ 415

Query: 406 FGKKNHIIC 414
            GKKN+ + 
Sbjct: 416 KGKKNYFLI 424


>gi|262383070|ref|ZP_06076207.1| tyrosyl-tRNA synthetase [Bacteroides sp. 2_1_33B]
 gi|262295948|gb|EEY83879.1| tyrosyl-tRNA synthetase [Bacteroides sp. 2_1_33B]
          Length = 430

 Score =  258 bits (660), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 146/427 (34%), Positives = 227/427 (53%), Gaps = 22/427 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG I  +    E  +   + + +AY+G D TA SLH GHL  +M+L   Q+ 
Sbjct: 2   NFVEELRWRGMIADMMPGTEEQL--QKELTSAYVGIDPTADSLHIGHLVSVMMLKHFQRA 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL-M 125
           GH+PI+L+GG T +IGDPS +   R ++    ++ N + IK   + F+ + +   +A  +
Sbjct: 60  GHRPIALVGGATGMIGDPSMKSAERNLLDEATLRHNQDCIKKQLAKFLDFDSDAPNAAKL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQS--LSFLEFNYMILQAYD 183
           +NN  W+    +++ +R+IG   +VN M++ +SV+ RL RE S  +SF EF+Y +LQ YD
Sbjct: 120 VNNYDWMKDYSFLNFIRDIGKHITVNYMMAKDSVKKRLSRESSVGMSFTEFSYQLLQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           ++ L ++  CRLQMGG+DQWGNI  G +L  R    + +ALT PL+T A G K GKT SG
Sbjct: 180 YLYLYEHEGCRLQMGGTDQWGNITTGTELIRRTLGGEAYALTCPLITKADGGKFGKTESG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPM--SEIDRMAKLQGKEINEAKKI 301
            IWL++  TSPY F+Q+W N+ DAD   + K  T L           +     +   +K 
Sbjct: 240 NIWLDRRYTSPYKFYQFWLNVSDADAAKYIKIFTDLSQEEIAALEAEQEAAPHLRPLQKR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDEVS 347
           +A E+T MVH  E+ E A  A+   F  S H               + +P   IS+DE++
Sbjct: 300 LAKEVTVMVHSLEDYEAAVEASNILFGNSTHEALLKLDEDTLLAVFEGVPHFDISRDELA 359

Query: 348 RGMGLLTLIV-KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+  + L   KA    S  E R+ ++S  +  N   ++     I          + +  
Sbjct: 360 AGIKAVDLCTEKAAIFPSKGEMRKLVQSGGVSFNKEKLAEVDTVIDCSSLLDDKYLLVQR 419

Query: 407 GKKNHII 413
           GKKN+ +
Sbjct: 420 GKKNYYL 426


>gi|41407494|ref|NP_960330.1| tyrosyl-tRNA synthetase [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|81414375|sp|Q740F5|SYY_MYCPA RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|41395847|gb|AAS03713.1| TyrS [Mycobacterium avium subsp. paratuberculosis K-10]
          Length = 421

 Score =  258 bits (660), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 153/413 (37%), Positives = 233/413 (56%), Gaps = 16/413 (3%)

Query: 11  ILSERGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
           IL E G+   I+   +LD L ++   +T Y G+D TA SLHAGHL  L+ L   Q+ GH+
Sbjct: 5   ILDELGWRGLIAQSTDLDALAAEARPMTVYAGFDPTAPSLHAGHLVPLLALRRFQRAGHR 64

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQE-IQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           PI L GG T +IGDP  RD   R +   + + E  E+I+G    F+ +    T A+++NN
Sbjct: 65  PIVLAGGATGMIGDP--RDVGERTLNEADTVAEWTERIRGQLERFVDFDESDTGAVVVNN 122

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             W   +  I+ LR++G  FSVN ML  ++VR RL+ +  +S+ EF+YM+LQA D+VEL 
Sbjct: 123 LDWTRQLSAIEFLRDLGKHFSVNVMLDRDTVRRRLEGD-GISYTEFSYMLLQANDYVELH 181

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK-TLSGAIWL 247
           + Y C LQ+GGSDQWGNII G+ L  +     + ALT PL+T A GTK GK T  G++WL
Sbjct: 182 RRYGCVLQIGGSDQWGNIIAGVRLVRQKLGATVHALTVPLVTAADGTKFGKSTGGGSLWL 241

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATE 305
           +  +T+PY ++QY+ N  DADV+ + +  T L   E+  + +   +   +  A++ +A E
Sbjct: 242 DPALTTPYAWYQYFFNTADADVIRYLRWFTFLSADELGELERATAERPQQRAAQRRLARE 301

Query: 306 ITTMVHGRE--EAEKAATAA------MECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
           +T +VHG    EA K A+ A      +E  D +  +  +   S+++ +     G++ L+V
Sbjct: 302 LTVLVHGEAATEAVKHASRALFGQGELERLDAATLAAALRETSVAELKPGAPDGIVDLLV 361

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            +G + S   ARR L    + +NN  I  E    +  DF     + L  GK+ 
Sbjct: 362 ASGLSESRKAARRTLGEGGVSVNNVRIDREDWAPQPSDFLHGKWLVLRRGKRT 414


>gi|147817232|emb|CAN64191.1| hypothetical protein VITISV_016956 [Vitis vinifera]
          Length = 868

 Score =  258 bits (660), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 157/424 (37%), Positives = 237/424 (55%), Gaps = 19/424 (4%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           +P  +S+ + IL +RG +  I++P  L    S   +  Y G+D TA SLH G+L  L++L
Sbjct: 54  IPLHRSNVIEILEQRGLVDSITSPI-LRASSSTQTLKVYCGFDPTAESLHLGNLLGLIVL 112

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT-- 118
            W ++ GHK ++L+GG T+ IGDPS +   R  +  + +++N   I    +S +   T  
Sbjct: 113 SWFRRCGHKAVALIGGATARIGDPSGKSLERPELNLEALEKNTIGITNTITSILNRSTTN 172

Query: 119 -GKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYM 177
            G    ++LNN  W      +D L+++G +  V  M++ ESV+ RL+ EQ +S+ EF Y 
Sbjct: 173 GGDDSFVVLNNYDWWKEFTLLDFLKKVGRYARVGTMMAKESVKKRLESEQGMSYTEFTYQ 232

Query: 178 ILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER-LKTPKLFALTSPLLTTASGTK 236
           +LQ YDF+ L +N    +Q GGSDQWGNI  G +L  + L+T   + LT PLL  + GTK
Sbjct: 233 LLQGYDFLYLFENEGVSVQFGGSDQWGNITAGTELIRKILQTDGAYGLTFPLLLKSDGTK 292

Query: 237 MGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM-AKLQGKEI 295
            GK+  GAIWL+  M SPY F+QY+ ++ DADVV F K LT L M EI  +  K++    
Sbjct: 293 FGKSEDGAIWLSPAMLSPYKFYQYFFSVPDADVVRFLKILTFLDMDEIMELEVKMRSPSY 352

Query: 296 --NEAKKIIATEITTMVHGRE---EAEKAATAAMECFDMSIH-------SQHMPTISISK 343
             N A++ +A E T  VHG+E   EA KA  A     +  +        ++ +P+ S+S 
Sbjct: 353 VPNTAQRRLAEEATRFVHGQEGLDEALKATEALRPGAETKLDWKTIEGIAKDVPSCSLSY 412

Query: 344 DEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
           DEV   + LL L +  G   S + ARR LK   + +NN+ I +E  +I+ +D      + 
Sbjct: 413 DEV-LNLSLLDLSISTGLLESKSAARRLLKQGGLYLNNNRIDSEAKRIEAEDIVDGKVLL 471

Query: 404 LSFG 407
           LS G
Sbjct: 472 LSAG 475


>gi|28379288|ref|NP_786180.1| tyrosine--tRNA ligase [Lactobacillus plantarum WCFS1]
 gi|300766749|ref|ZP_07076664.1| tyrosine--tRNA ligase [Lactobacillus plantarum subsp. plantarum
           ATCC 14917]
 gi|308181488|ref|YP_003925616.1| tyrosine--tRNA ligase [Lactobacillus plantarum subsp. plantarum
           ST-III]
 gi|81630766|sp|Q88TV5|SYY_LACPL RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|28272127|emb|CAD65031.1| tyrosine--tRNA ligase [Lactobacillus plantarum WCFS1]
 gi|300495657|gb|EFK30810.1| tyrosine--tRNA ligase [Lactobacillus plantarum subsp. plantarum
           ATCC 14917]
 gi|308046979|gb|ADN99522.1| tyrosine--tRNA ligase [Lactobacillus plantarum subsp. plantarum
           ST-III]
          Length = 418

 Score =  258 bits (660), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 153/423 (36%), Positives = 222/423 (52%), Gaps = 30/423 (7%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I+Q ++   L  L     V+ Y G D T  S+H GHL   M+L   Q  GH P 
Sbjct: 7   LKWRGAINQQTDEAGLKELTENQSVSLYCGIDPTGDSMHIGHLIPFMILKRFQLAGHHPY 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            ++GGGT  IGDPS ++  R++    +++ N +   G+ +   K      +  ++NN  W
Sbjct: 67  VVVGGGTGAIGDPSGKNSERKLQTMDQVKHNQD---GLSAQMYKLFGHDENFSIVNNYDW 123

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L  I  +D LR+ G  FSVN ML+ E V SRL  E  +S+ EF Y ILQ+ DF+ L +  
Sbjct: 124 LSKISLLDFLRDYGKLFSVNTMLNKEVVASRL--EVGISYTEFTYQILQSVDFLHLYRAE 181

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLK--TPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
             +LQ+GG+DQWGNI  G DL  RL+    K + LT PLL  A GTK GKT  GA+WLN 
Sbjct: 182 HVQLQIGGADQWGNITAGTDLIHRLEGNDAKAYGLTIPLLLKADGTKFGKTAGGAVWLNP 241

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIATEIT 307
           E TSPY F+Q+W N DD DVV + K  T L   EIDR+A+      E  EA++ +A E+T
Sbjct: 242 ERTSPYEFYQFWINQDDRDVVKYLKYFTFLSHEEIDRLAETVKTAPEKREAQRRLAEEVT 301

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMG--------------LL 353
             VHG++   +A       F   +        S++ DE+ +G                +L
Sbjct: 302 EFVHGKQAVVEAENITKALFTGDVQ-------SLTADEIEQGFKGVPSADVSAEKQNIVL 354

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            L+    F  S  +AR  +K+ AI+IN   +++ + +I      +   + +  GKK + +
Sbjct: 355 WLVDATKFEPSRRQAREDIKNGAIRINGEKVTDVEAEIDPSAAFNGKFVIVRRGKKRYFL 414

Query: 414 CHL 416
            H+
Sbjct: 415 AHV 417


>gi|150009644|ref|YP_001304387.1| putative tyrosyl-tRNA synthetase 1 [Parabacteroides distasonis ATCC
           8503]
 gi|255013075|ref|ZP_05285201.1| putative tyrosyl-tRNA synthetase 1 [Bacteroides sp. 2_1_7]
 gi|256838682|ref|ZP_05544192.1| tyrosyl-tRNA synthetase [Parabacteroides sp. D13]
 gi|298374041|ref|ZP_06983999.1| tyrosine--tRNA ligase [Bacteroides sp. 3_1_19]
 gi|189083665|sp|A6LGF1|SYY_PARD8 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|149938068|gb|ABR44765.1| putative tyrosyl-tRNA synthetase 1 [Parabacteroides distasonis ATCC
           8503]
 gi|256739601|gb|EEU52925.1| tyrosyl-tRNA synthetase [Parabacteroides sp. D13]
 gi|298268409|gb|EFI10064.1| tyrosine--tRNA ligase [Bacteroides sp. 3_1_19]
          Length = 430

 Score =  258 bits (660), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 146/427 (34%), Positives = 227/427 (53%), Gaps = 22/427 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG I  +    E  +   + + +AY+G D TA SLH GHL  +M+L   Q+ 
Sbjct: 2   NFVEELRWRGMIADMMPGTEEQL--QKELTSAYVGIDPTADSLHIGHLVSVMMLKHFQRA 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL-M 125
           GH+PI+L+GG T +IGDPS +   R ++    ++ N + IK   + F+ + +   +A  +
Sbjct: 60  GHRPIALVGGATGMIGDPSMKSAERNLLDEATLRHNQDCIKKQLAKFLDFDSDAPNAAKL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQS--LSFLEFNYMILQAYD 183
           +NN  W+    +++ +R+IG   +VN M++ +SV+ RL RE S  +SF EF+Y +LQ YD
Sbjct: 120 VNNYDWMKGYSFLNFIRDIGKHITVNYMMAKDSVKKRLSRESSVGMSFTEFSYQLLQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           ++ L ++  CRLQMGG+DQWGNI  G +L  R    + +ALT PL+T A G K GKT SG
Sbjct: 180 YLYLYEHEGCRLQMGGTDQWGNITTGTELIRRTLGGEAYALTCPLITKADGGKFGKTESG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPM--SEIDRMAKLQGKEINEAKKI 301
            IWL++  TSPY F+Q+W N+ DAD   + K  T L           +     +   +K 
Sbjct: 240 NIWLDRRYTSPYKFYQFWLNVSDADAAKYIKIFTDLSQEEIAALEAEQEAAPHLRPLQKR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDEVS 347
           +A E+T MVH  E+ E A  A+   F  S H               + +P   IS+DE++
Sbjct: 300 LAKEVTVMVHSLEDYEAAVEASNILFGNSTHEALLKLDEDTLLAVFEGVPHFDISRDELA 359

Query: 348 RGMGLLTLIV-KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+  + L   KA    S  E R+ ++S  +  N   ++     I          + +  
Sbjct: 360 AGIKAVDLCTEKAAIFPSKGEMRKLVQSGGVSFNKEKLAEVDTVIDCSSLLDDKYLLVQR 419

Query: 407 GKKNHII 413
           GKKN+ +
Sbjct: 420 GKKNYYL 426


>gi|315303381|ref|ZP_07873993.1| tyrosyl-tRNA synthetase [Listeria ivanovii FSL F6-596]
 gi|313628249|gb|EFR96770.1| tyrosyl-tRNA synthetase [Listeria ivanovii FSL F6-596]
          Length = 419

 Score =  258 bits (659), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 150/389 (38%), Positives = 211/389 (54%), Gaps = 21/389 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I+Q ++   L     +  ++ Y G D +  S+H GHL   M+L   Q  GH+PI
Sbjct: 7   LEWRGAIYQQTDEEGLRKWVEEKQISLYCGIDPSGDSMHIGHLIPFMILRRFQNAGHRPI 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+GG T  IGDPS + E R++   ++I +N+E ++        +  G + A M+NN  W
Sbjct: 67  ILVGGATGTIGDPSGKKEERQLQSIEQISKNVESLRVQLGKIFDF-EGDSAASMVNNYDW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
              +  +D LR+ G  F+VN MLS + V SRL  E  +SF EF Y ILQA DF  L +  
Sbjct: 126 TKDVSILDFLRDYGKEFNVNTMLSKDIVASRL--EVGISFTEFAYQILQAMDFNHLYEFN 183

Query: 192 DCRLQMGGSDQWGNIICGIDL--GERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
           DCRLQ+GGSDQWGNI  G+DL   ++ +  K F LT PLLT A GTK GK+  GAIWLN 
Sbjct: 184 DCRLQIGGSDQWGNITAGLDLIRKKQGENAKAFGLTIPLLTKADGTKFGKSEGGAIWLNP 243

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE--INEAKKIIATEIT 307
           E T+PY F+Q+W N DD DVV + K  T L  +EI  +AK   +E  +  A+K +A E+T
Sbjct: 244 EKTTPYEFYQFWINTDDRDVVKYLKYFTFLTEAEIADLAKQVEEEPHLRAAQKTLAAEMT 303

Query: 308 TMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIV 357
             VH  E   +A   +   F   + +          + +PT    + E    M L+  +V
Sbjct: 304 KFVHSEEALAQALKISKALFSGDVKALTATEIEQGFKDVPTFEAEEAE----MNLVDWLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISN 386
             G   S  +AR  + + AI IN   + +
Sbjct: 360 SLGVEPSKRQAREDVMNGAIYINGERVQD 388


>gi|75411773|sp|Q9EUU8|SYY_MYCFO RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|11830856|emb|CAC18748.1| tyrosyl-tRNA synthetase [Mycobacterium fortuitum]
          Length = 428

 Score =  258 bits (659), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 155/431 (35%), Positives = 234/431 (54%), Gaps = 33/431 (7%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L  RG I Q ++   L    + G +T Y G+D TA SLHAGHL  L+ L   Q+ G
Sbjct: 5   ILDELDWRGLIAQSTDRETLANDLANGPMTVYSGFDPTAPSLHAGHLVPLLTLRRFQRAG 64

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQE-IQENIEKIKGIFSSFIKYGTGKTDALML 126
           H+PI L GG T +IGDP  RD   R + + + + +   +I+G    F+++    T A++ 
Sbjct: 65  HRPIVLAGGATGMIGDP--RDTGERTLNTADTVADWAGRIRGQLERFVEFDDTPTGAIVE 122

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   +  I+ LR++G +FSVN ML  E+VR RL+ +  +S+ EF+YM+LQA DFVE
Sbjct: 123 NNLNWTGRLSAIEFLRDLGKYFSVNVMLDRETVRRRLEGD-GISYTEFSYMLLQANDFVE 181

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA-I 245
           L + Y C LQ+GGSDQWGNI+ G  L  +     + A+T+PL+T + G K GK+  G  +
Sbjct: 182 LHQRYGCALQIGGSDQWGNIVAGARLVRQKLGATVHAMTTPLVTDSEGKKFGKSTGGGNL 241

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIA 303
           WL+ EMTSPY ++QY+ N  DADV+ + +  T L   EI  +        +E  A+K +A
Sbjct: 242 WLDPEMTSPYAWYQYFVNTADADVIGYLRWFTFLSADEIAELEDATQNRAHERAAQKRLA 301

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQ------HMPTISISKDEVSRGM------- 350
            E+TT+VHG     + AT A+E    ++  +         T+  +  E S G        
Sbjct: 302 RELTTLVHG-----EGATTAVELASQALFGRAELADLDESTLGAALREASNGQVAELKPG 356

Query: 351 ---GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFG 407
               ++ L+V+ G A S   ARR++    + +NN  I +++   +  DF     + L  G
Sbjct: 357 GPDSIVDLLVETGLAASKGAARRNVAEGGVYVNNIRIESDEWIPQHSDFLHERWLVLRRG 416

Query: 408 KKNHIICHLCG 418
           K+     H+ G
Sbjct: 417 KR-----HIAG 422


>gi|302796549|ref|XP_002980036.1| hypothetical protein SELMODRAFT_111886 [Selaginella moellendorffii]
 gi|300152263|gb|EFJ18906.1| hypothetical protein SELMODRAFT_111886 [Selaginella moellendorffii]
          Length = 467

 Score =  258 bits (659), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 144/426 (33%), Positives = 233/426 (54%), Gaps = 22/426 (5%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           + + + IL +RG +  I+    L   C +  +  Y G+D TA SLH G+L  +++L W Q
Sbjct: 49  RRNVVEILEQRGLVESIAG-ESLKKACDEKPIKVYCGFDPTAESLHLGNLLGIVVLEWFQ 107

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + GH+ ++L+GG T  IGDPS +   R +M    I++N + I+ + +  ++       A+
Sbjct: 108 RCGHETVALLGGATGRIGDPSGKSAERPVMDEATIEKNTQGIQALLTEILQ-----QKAV 162

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           +LNN  W      ++ LR++G F  V  M++ ESV+ RL  E+ +SF EF Y +LQ YDF
Sbjct: 163 VLNNYDWWKEFSLLEFLRDVGKFARVGTMVAKESVKRRLALEEGISFTEFTYQLLQGYDF 222

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGER-LKTPKLFALTSPLLTTASGTKMGKTLSG 243
           V L K+    +Q+GGSDQWGNI  GIDL  + L+    + LT PLL  + GTK GK+  G
Sbjct: 223 VHLYKSNGVSVQIGGSDQWGNITAGIDLVRKLLQRDDAYGLTFPLLVKSDGTKFGKSEGG 282

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL---QGKEINEAKK 300
           A+WL+ +  SPY+F+Q+     D+DV+   + LT + + EI+ + K     G   N A++
Sbjct: 283 AVWLSSKFLSPYHFYQHLFATPDSDVIKMLRMLTFVELEEIEALEKSMSEPGYVANTAQR 342

Query: 301 IIATEITTMVHGREEAEKA----------ATAAMECFDMSIHSQHMPTISISKDEVSRGM 350
            +A E+T  VHG +  E+A          +T  ++   +   S+ +P+ ++    V   +
Sbjct: 343 RLAEEVTRFVHGEDGLEEALKVTQALAPGSTTTLDWTAIEAISKDVPSCTLDSSIVVGPV 402

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
             + L V  G A S   ARR +K   I +NN+ + +E+L +   D      + LS GKKN
Sbjct: 403 --VDLCVSCGLAPSKAVARRLIKQGGIYMNNAKVDDERLLVAESDIIDGKMLLLSAGKKN 460

Query: 411 HIICHL 416
            ++  +
Sbjct: 461 KMVVRI 466


>gi|269956136|ref|YP_003325925.1| tyrosyl-tRNA synthetase [Xylanimonas cellulosilytica DSM 15894]
 gi|269304817|gb|ACZ30367.1| tyrosyl-tRNA synthetase [Xylanimonas cellulosilytica DSM 15894]
          Length = 419

 Score =  258 bits (659), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 144/418 (34%), Positives = 225/418 (53%), Gaps = 12/418 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +D L  L  RG + Q ++   L    ++G +T Y G+D TA SLH GHL QL++L  LQ 
Sbjct: 2   TDVLDELQWRGLVAQTTDEAALRSALAEGPITYYCGFDPTAPSLHHGHLVQLVVLRHLQL 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQE-IQENIEKIKGIFSSFIKYGTGKTDAL 124
            GH+ ++L+GG T +IGDP  R    R++ ++E + +  E++K   S F+ +  G   AL
Sbjct: 62  AGHRAVALVGGATGLIGDP--RQSGERVLNTKETVADWTERLKAQVSRFLDF-EGDNPAL 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           ++NN  W+  +  ID LR++G  + +  ML+ ++V  RL+ E+ +SF EF+Y ILQ  DF
Sbjct: 119 LVNNLDWISELSAIDFLRDVGKHYRLGTMLAKDTVARRLRSEEGISFTEFSYQILQGIDF 178

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL + +   LQ GG+DQWGN++ G++L  + +   +  LT+PL+T A GTK GKT  GA
Sbjct: 179 LELHRRHGVSLQTGGNDQWGNLLSGVELIRKAEGTAVHVLTTPLITKADGTKFGKTEGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKKII 302
           +WL  +M SPY F+QYW N  D DVV + K  T     EI  +  A  +     EA++ +
Sbjct: 239 VWLAPDMMSPYAFYQYWLNAADEDVVGWLKIFTFRSREEIAELETAVRERPGAREAQRAL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECF------DMSIHSQHMPTISISKDEVSRGMGLLTLI 356
           A+++TT+VHG    E    A+   F      D+   +       + +     G  ++   
Sbjct: 299 ASDVTTLVHGAAATEAVIAASQALFGRGELRDLDEATLRGAVAELPRTTAKPGDLIVDAF 358

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           V AG   S   ARR +      +NN  +++E+   +  D        L  GKK   + 
Sbjct: 359 VGAGLVASKAAARRAIGEGGAYVNNVKVTSEEQVFEAGDLLHGRYAVLRRGKKTLAVA 416


>gi|198274138|ref|ZP_03206670.1| hypothetical protein BACPLE_00275 [Bacteroides plebeius DSM 17135]
 gi|198273216|gb|EDY97485.1| hypothetical protein BACPLE_00275 [Bacteroides plebeius DSM 17135]
          Length = 430

 Score =  258 bits (659), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 146/428 (34%), Positives = 226/428 (52%), Gaps = 22/428 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG +H +    E   L  + +VTAY+G D TA SLH GHL  +M+L   Q+ 
Sbjct: 2   NFVDELRWRGMVHTMMPGTEE--LLEKEMVTAYLGIDPTADSLHIGHLCGVMMLRHFQRC 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD-ALM 125
           GHKP++L+GG T +IGDPS + + R ++  + ++ N E IK     F+ + +   + A +
Sbjct: 60  GHKPLALVGGATGMIGDPSGKSQERNLLDEETLRHNQECIKKQLGKFLDFESDAPNRAEL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQAYD 183
           +NN  W+    ++D  R +G   +VN M++ ESV+ RL  E    LSF EF Y +LQ YD
Sbjct: 120 VNNYDWMKDFSFLDFARTVGKHITVNYMMAKESVQKRLNGEARDGLSFTEFTYQLLQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ L +  +C+LQ+GGSDQWGNI  G +L  R    ++FALT PL+T A G K GKT SG
Sbjct: 180 FLHLYETKNCKLQLGGSDQWGNITTGAELIRRTNGGEVFALTCPLITKADGGKFGKTESG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKKI 301
            IWL+   TSPY F+Q+W N+ D D   + K  T+L   EI+ +     Q   +   +K 
Sbjct: 240 NIWLDARYTSPYKFYQFWLNVSDEDAKRYIKIFTSLSKEEIEGLIAEHEQAPHLRVLQKR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDEVS 347
           +A E+T MVH   +   A  A+   F  +                 + +P   ++K ++ 
Sbjct: 300 LAKEVTIMVHSEADYNAAVEASGILFGNATSEALKKLDEDTLLSVFEGVPQFEVAKSDIE 359

Query: 348 RGMGLLTLIV-KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+  + L   KA    S  E R+ ++   + +N   ++    +I   D      + +  
Sbjct: 360 AGIKAVDLFTEKAAIFPSKGEMRKLVQGGGVSLNKEKLAAFDQEITTADLLDEKYLLVQR 419

Query: 407 GKKNHIIC 414
           GKKN+ + 
Sbjct: 420 GKKNYYLV 427


>gi|255535883|ref|YP_003096254.1| Tyrosyl-tRNA synthetase [Flavobacteriaceae bacterium 3519-10]
 gi|255342079|gb|ACU08192.1| Tyrosyl-tRNA synthetase [Flavobacteriaceae bacterium 3519-10]
          Length = 452

 Score =  258 bits (658), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 150/408 (36%), Positives = 221/408 (54%), Gaps = 22/408 (5%)

Query: 28  DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFR 87
           D   ++   TAYIG+D TA SLH G L Q+ +L   Q+ GHKPI+L+GG T +IGDPS +
Sbjct: 43  DEQLNKETTTAYIGFDPTADSLHIGSLIQIKILAHFQQHGHKPIALVGGATGMIGDPSGK 102

Query: 88  DESRRMMRSQEIQENIEKIKGIFSSFIKY-GTGKTDALMLNNETWLCSIKYIDLLREIGS 146
              R  +  + +   +  +K   S F+K+ GT    A ++NN  W+    +++ +R+IG 
Sbjct: 103 STERNALDEETLNHYVSCLKSQLSKFLKFDGTESNSAELVNNYDWMKEFSFLEFIRDIGK 162

Query: 147 FFSVNRMLSFESVRSRLKRE---QSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQW 203
             +VN M++ ESV+ R+  E   + +SF EF Y +LQ YDF+ L +  + +LQMGGSDQW
Sbjct: 163 NITVNYMMAKESVKKRITGEGGAEGMSFTEFTYQLLQGYDFLHLYREKNVKLQMGGSDQW 222

Query: 204 GNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA-IWLNKEMTSPYNFWQYWR 262
           GNI  G +L  R    + FALT PL+T + G+K GK+ SG   WL+ + TS Y F+Q+W 
Sbjct: 223 GNITTGTELIRRKAQGEAFALTVPLITKSDGSKFGKSESGENYWLDPKKTSAYKFYQFWV 282

Query: 263 NIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAK--KIIATEITTMVHGREEAEKAA 320
           N  D D   F K  T L   EI+ +        +E K  K +A E+T  VH + E EKA 
Sbjct: 283 NATDEDAERFIKFYTFLSKEEIETLIAEHKTAPHERKLQKKLAEEVTVWVHNQAEYEKAV 342

Query: 321 TAAMECFDMSIHS--------------QHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
            A+   F  S                 + +P   ++KDEV  G  +  +  K GF  S  
Sbjct: 343 KASEILFGRSTAEDLVNLDEATFLEVFEGVPQKELTKDEVLAGNIIDLISEKTGFLKSKG 402

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           EARR L+SNAI +N   +++   ++  +D      + +  GKKN+ I 
Sbjct: 403 EARRELQSNAISVNKEKVTD-SFEVAAKDLIDGKFLLIQKGKKNYFIV 449


>gi|320011551|gb|ADW06401.1| tyrosyl-tRNA synthetase [Streptomyces flavogriseus ATCC 33331]
          Length = 422

 Score =  258 bits (658), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 147/415 (35%), Positives = 232/415 (55%), Gaps = 13/415 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +D +  L  RG   Q ++   L    + G VT Y G+D TA+SLH GHL Q++ +  LQ 
Sbjct: 2   TDIVDELKWRGLFAQSTDEDALRKALADGPVTFYCGFDPTAASLHVGHLVQVLTMRRLQL 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQE-IQENIEKIKGIFSSFIKYGTGKTDAL 124
            G KP++L+GG T  IGDP  R  + R +   E I   +++++G    F+ +  G   A 
Sbjct: 62  AGLKPLALVGGATGQIGDP--RPTAERTLNDPETIAAWVQRLRGQIEPFLTF-EGPNAAT 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M+NN  W   +  I+ LR+IG  F VN+ML+ +SV  RL+ ++ +S+ EF+Y +LQ  DF
Sbjct: 119 MVNNLDWTAGLSAIEFLRDIGKHFRVNKMLTKDSVARRLESQEGISYTEFSYQLLQGMDF 178

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT-PKLFALTSPLLTTASGTKMGKTLSG 243
           +EL + + C LQ GGSDQWGN+  GIDL  RL+    + AL +PL+  A GTK GK+ SG
Sbjct: 179 LELYRRHGCTLQQGGSDQWGNLTAGIDLIHRLEPGAAVHALATPLMVKADGTKFGKSESG 238

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT--TLPMSEIDRMAKLQGKEINEAKKI 301
           A+WL+ EMT+PY F+Q+W N+DD D+ ++ + L+  +    E       +  +   A++ 
Sbjct: 239 AVWLDPEMTTPYAFYQFWLNVDDRDISTYMRILSFRSREELEELEKLTEERPQARSAQRS 298

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMS-IHSQHMPTISISKDEVSRG----MG-LLTL 355
           +A E+TT+VHG E+      A+   F    +      T+S +  EV       +G ++ L
Sbjct: 299 LAEELTTLVHGGEQCAAVIAASKALFGQGELGELDEATLSAALSEVPHARVTELGPVVDL 358

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
           +V+ G + S + ARR +K     +NN+ +++ +      +      + L  GKKN
Sbjct: 359 LVEVGLSASKSAARRTVKEGGAYVNNAKVTDGESAPSADELLHGRWLVLRRGKKN 413


>gi|332881510|ref|ZP_08449159.1| tyrosine--tRNA ligase [Capnocytophaga sp. oral taxon 329 str.
           F0087]
 gi|332680508|gb|EGJ53456.1| tyrosine--tRNA ligase [Capnocytophaga sp. oral taxon 329 str.
           F0087]
          Length = 430

 Score =  258 bits (658), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 148/427 (34%), Positives = 231/427 (54%), Gaps = 22/427 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG IH +  P   D+L  +  VTAY+G D TA SLH GHL  +M+L   Q+ 
Sbjct: 2   NFVEELKWRGMIHTMM-PGTEDLL-EKEQVTAYLGIDPTADSLHIGHLCGVMMLKHFQRC 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD-ALM 125
           GHKP++L+GG T +IGDPS + + R ++  + ++ N+  IK   + F+ + +   + A +
Sbjct: 60  GHKPLALIGGATGMIGDPSGKSQERNLLDEETLRHNVACIKQQLARFLDFDSDAPNHAEL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQAYD 183
           +NN  W+    ++D  RE+G   +VN M++ +SV+ RL  E    LSF EF Y +LQ YD
Sbjct: 120 VNNYDWMKDFTFLDFAREVGKHITVNYMMAKDSVQKRLNGEARDGLSFTEFTYQLLQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ L ++  CRLQ+GGSDQWGNI  G +L  R    ++FAL  PL+T A GTK GKT  G
Sbjct: 180 FLYLYEHKGCRLQLGGSDQWGNITTGAELIRRTNGGEVFALVCPLVTKADGTKFGKTEKG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEA--KKI 301
            IWLN++ TSPY F+Q+W N+ D D   + +  TTL   EID +     ++  +   +K 
Sbjct: 240 NIWLNRDYTSPYAFYQFWLNVADDDAKRYIRIFTTLDKEEIDGLIAQHDEDPGQRILQKR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQ--------------HMPTISISKDEVS 347
           +A EIT MVH  E+   A  A+   F  +                   +P   +S++ +S
Sbjct: 300 LAKEITIMVHSEEDYNMAVEASNILFGKATKESLTKLDEQTLLDVFAGVPQFEVSREVLS 359

Query: 348 RGMGLLTLIVKAGFA-TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+  + L  +      S  E R+ ++   + +N   ++     +   D  +   + +  
Sbjct: 360 AGIKAVDLTAEMTQCFPSKGEMRKMVQGGGVSLNKEKLTAFDRIVTADDLLNGKYLLVQR 419

Query: 407 GKKNHII 413
           GKKN+ +
Sbjct: 420 GKKNYFL 426


>gi|52140461|ref|YP_086368.1| tyrosyl-tRNA synthetase [Bacillus cereus E33L]
 gi|81685533|sp|Q631P9|SYY2_BACCZ RecName: Full=Tyrosyl-tRNA synthetase 2; AltName:
           Full=Tyrosine--tRNA ligase 2; Short=TyrRS 2
 gi|51973930|gb|AAU15480.1| tyrosine--tRNA ligase (tyrosyl-tRNA synthetase) [Bacillus cereus
           E33L]
          Length = 419

 Score =  258 bits (658), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 150/419 (35%), Positives = 222/419 (52%), Gaps = 21/419 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG ++Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  GH P+
Sbjct: 7   LEWRGAVNQQTDEEGLRKLVEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLAGHHPV 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+GG T  IGDPS R   R++   + +Q N++ +         +G G ++  M+NN  W
Sbjct: 67  ILIGGATGTIGDPSGRQSERQLQTLEVVQHNVDALTAQMKKLFDFG-GNSEVKMVNNYDW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
              I  I+ LR+ G  FS+N ML+ + V SRL  +  +SF EF Y ILQA DF  L K  
Sbjct: 126 THEINIIEFLRDYGKNFSINSMLAKDIVASRL--DTGISFTEFTYQILQAMDFHHLYKKE 183

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLK--TPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
           D +LQ+GGSDQWGNI  G+DL  +L+    K+F LT PLL  + GTK GK+  GA+WL+ 
Sbjct: 184 DVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSAGGAVWLDP 243

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN--EAKKIIATEIT 307
           E T+P+ F+Q+W N DD DVV + K  T L    ID +A     E +  EA+K++A E+T
Sbjct: 244 EKTTPFEFYQFWVNTDDRDVVKYLKYFTFLTKERIDELAVKVETEPHKREAQKVLAEEMT 303

Query: 308 TMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIV 357
             VHG E   +A       F   I S          + MPT   SK+  +    ++  +V
Sbjct: 304 KFVHGEEALLQAVKITAALFSGDIKSLTADEIEQGFKEMPTFQSSKETKN----IVEWLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             G   S  +AR  + + AI +N   +++    + +++      I +  GKKN+ +  L
Sbjct: 360 DLGIEPSRRQAREDINNGAISMNGEKVTDVGTDVTVENSFDGRFIIIRKGKKNYSLVKL 418


>gi|89100096|ref|ZP_01172965.1| tyrosyl-tRNA synthetase [Bacillus sp. NRRL B-14911]
 gi|89085186|gb|EAR64318.1| tyrosyl-tRNA synthetase [Bacillus sp. NRRL B-14911]
          Length = 418

 Score =  258 bits (658), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 140/398 (35%), Positives = 220/398 (55%), Gaps = 13/398 (3%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L  RG ++Q ++    + L  +  ++ Y G D TA S+H GHL   + L   Q  G
Sbjct: 3   LLEDLKWRGIVYQQTDEEGTEELLKKEKISLYCGIDPTADSMHIGHLLPFLTLRRFQNEG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+PI L+GG T +IGDPS + E R++   + IQ N+  I+        +  G+  ALM+N
Sbjct: 63  HRPIVLVGGATGLIGDPSGKSEERKLQTLEAIQHNVSSIQKQLKKIFSF-EGENGALMVN 121

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W  S+  +  LR+ G    VN ML+ +++ SRL  +  +SF EF Y ILQA DF+ L
Sbjct: 122 NYDWAGSMDIVTFLRDYGKHVGVNYMLAKDTIASRL--DTGISFTEFTYTILQAMDFLHL 179

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERL--KTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            + ++C++Q+GGSDQWGNI  G++L  ++  +  K + +T PL+T A GTK GKT SGAI
Sbjct: 180 YEKHNCKMQIGGSDQWGNITTGLELIRKMMPEGAKGYGVTIPLVTKADGTKFGKTESGAI 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE--INEAKKIIA 303
           WL+ E TSPY F+Q+W N  DADV+ + K  T LP  EI+ +     +E  + +A+K +A
Sbjct: 240 WLDPEKTSPYEFYQFWINTADADVIKYLKYFTFLPKEEIEALENSLAEEAHLRKAQKALA 299

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRGMGLLTLIV 357
            E+T ++HG    E+A   +   F   + +     I+       S +      G++ L+ 
Sbjct: 300 EEMTKLIHGEAALEQAIKISAALFSGDVKNLTASEITQGFKDVPSYEPTGEENGIVDLLT 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
            A  + S  +AR  + + A+ +N   I+    ++  +D
Sbjct: 360 AAKISPSKRQAREDVSNGAVYVNGERITATDYELTEKD 397


>gi|296393969|ref|YP_003658853.1| tyrosyl-tRNA synthetase [Segniliparus rotundus DSM 44985]
 gi|296181116|gb|ADG98022.1| tyrosyl-tRNA synthetase [Segniliparus rotundus DSM 44985]
          Length = 428

 Score =  258 bits (658), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 142/413 (34%), Positives = 235/413 (56%), Gaps = 13/413 (3%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L  L  RG I Q ++ + L    ++G VT Y G+D TA SLHAGHL  L+    LQ+ GH
Sbjct: 9   LQELGWRGLIAQSTDEQALAGAFAKGPVTFYAGFDPTADSLHAGHLMLLLTARRLQRLGH 68

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           +P+ L GG T +IGDP    E R++     ++E +E++K   + F+++    T A++ NN
Sbjct: 69  RPVLLAGGATGLIGDPREVGE-RQLADEALVRERVERLKPQLTKFVEFDDSPTGAVLANN 127

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             W   +  +D LR+IG  FSVN ML+ E++R RL  +  LS+ EF+Y++LQ+ D+++L 
Sbjct: 128 LDWTGQLSALDFLRDIGKHFSVNVMLARETIRKRLDGD-GLSYTEFSYLLLQSNDYLQLH 186

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK-TLSGAIWL 247
           + +   LQ+GGSDQWGNI+ G +L  R+    + ALT+PL+T++ G K+GK T  G+IWL
Sbjct: 187 RKFGATLQLGGSDQWGNIVGGAELIRRIDGAHVHALTTPLVTSSDGVKLGKSTGGGSIWL 246

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATE 305
           + E TSPY ++QY+  + D+DV  + +  T L  +E + + +   +  ++  A++ +A E
Sbjct: 247 DPEKTSPYAWYQYFLAVQDSDVGKYLRWFTDLDQAEAEELDEATAQRPHQRLAQRRLAQE 306

Query: 306 ITTMVHGREEAEKAATAAMECF--------DMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
           +TT+VHG EE  +   A+   F        + +   Q +    +++        ++ L+V
Sbjct: 307 LTTIVHGAEELRRVEAASQALFGSGELKDLEPAALGQALAETPLAQVVPDGATSIVDLLV 366

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
             G   S N ARR ++     +NN  +++ + Q    D+     + L  GK+N
Sbjct: 367 ATGLCESRNAARRTVQEGGAWVNNQRVADAEWQPCEDDWLHGRWLVLRRGKRN 419


>gi|332702737|ref|ZP_08422825.1| Tyrosyl-tRNA synthetase [Desulfovibrio africanus str. Walvis Bay]
 gi|332552886|gb|EGJ49930.1| Tyrosyl-tRNA synthetase [Desulfovibrio africanus str. Walvis Bay]
          Length = 418

 Score =  258 bits (658), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 151/392 (38%), Positives = 227/392 (57%), Gaps = 31/392 (7%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I+Q+S+  ++    S    + Y G+D TASSLH GHL  L+ L+  Q+ GH+PI
Sbjct: 7   LKWRGLIYQVSDEGKVREYLSTPGRSLYCGFDPTASSLHIGHLVPLLALYRFQRAGHRPI 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKG----IFSSFIKYGTGKTDALMLN 127
           +LMGGGT++IGDPS +D  R+++  + I+ +IE IK     IF   +++         +N
Sbjct: 67  ALMGGGTALIGDPSGKDVERQLIARETIEASIESIKTQVRRIFGGEVRF---------VN 117

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYDFVE 186
           N  W+     I+LLR++G +F+VN M+  ESV++R+ R++  +SF EF+YMILQAYDF  
Sbjct: 118 NYDWIGRTTAIELLRDVGKYFTVNWMMQKESVKNRISRDEVGISFTEFSYMILQAYDFSV 177

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           LA+   C LQ+GGSDQWGNI  G +L  +    +  ALT PL+TTA G K GK+  GAI+
Sbjct: 178 LAEQEGCMLQIGGSDQWGNITAGTELIRKKLGKEAIALTFPLITTADGKKFGKSEKGAIF 237

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIAT 304
           L+  +T  Y F+QY+   DD DV+ F +  T +   EI+   +   +  E    ++ +A 
Sbjct: 238 LDPALTPVYEFYQYFMRTDDRDVIRFLRYFTFVSREEIEALEVTLAERPEQRVPQRRLAA 297

Query: 305 EITTMVHGREEAEK--AATAAM---------ECFDMSIHSQHMPTISISKDEVSRGM-GL 352
           E+T +VHG EE  K  AATAA+         +   + I     P++S    E   G+  L
Sbjct: 298 EMTRLVHGEEELLKVEAATAALFGTGDLREVDPVMLRIVFNEAPSVSYPGLE---GLPDL 354

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSII 384
             ++V  G + S  +AR+ L+   + +NN  I
Sbjct: 355 PQILVDLGLSKSKGQARKDLEQGGVYVNNCRI 386


>gi|83858728|ref|ZP_00952250.1| tyrosyl-tRNA synthetase [Oceanicaulis alexandrii HTCC2633]
 gi|83853551|gb|EAP91403.1| tyrosyl-tRNA synthetase [Oceanicaulis alexandrii HTCC2633]
          Length = 429

 Score =  258 bits (658), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 139/424 (32%), Positives = 238/424 (56%), Gaps = 20/424 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           FL+ +  RG ++Q   P   D   ++     Y+G+D +A SLHAG+L  L+ +   ++ G
Sbjct: 13  FLADMEARGLLNQ-KTPELTDAYITEHRPAMYVGFDPSAPSLHAGNLMPLLGMDRYRQRG 71

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
            + + L+GG T +IGDPS +D  R +     ++ NIE  +  F        G  + + +N
Sbjct: 72  GQVVVLLGGATGLIGDPSGKDAERNLQTEDVVEANIEGQRKQFERLFALTDG-PEPIYVN 130

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK-REQSLSFLEFNYMILQAYDFVE 186
           N  W   +  +  LR++G  FSVN ML+ +SVR+R++ R+Q +SF EF+Y +LQ YDFV 
Sbjct: 131 NADWWRKMDVVSFLRDVGKHFSVNAMLTKDSVRNRIENRDQGISFTEFSYQLLQGYDFVH 190

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + ++ ++QMGGSDQWGNI+ G+DL  R++  +  A+T PLLT + G K GK+  GA+W
Sbjct: 191 LHRAHNVQIQMGGSDQWGNIVGGVDLMRRIEGVQAHAVTYPLLTNSEGKKYGKSEKGAVW 250

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           ++ ++TSPY F+Q+W N  DAD   F   LT + +++++ + + +   +   +K +A  +
Sbjct: 251 IDPDLTSPYEFYQFWLNSADADAPKFLSWLTDVDLAQLEELTQAE-PHLRLPQKALAELL 309

Query: 307 TTMVHGREEAEKAATAAMECFD----------MSIHSQHMPTISISKDEVSRGMGLLTLI 356
           T  VHG++ A+ A  A+   F           + + ++ +PT+  S +E    + L+  +
Sbjct: 310 TARVHGQKAADLAIEASQVIFKGQSDNLSAELIDMIARAVPTLDASANEP---LPLIDAL 366

Query: 357 VKA--GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           V    G + S +EARR LK N++ +N   + +E   ++ +     G + +S GK    + 
Sbjct: 367 VAETLGASASKSEARRLLKQNSVSLNGQKVQDENADVR-EHRTGAGAVVMSVGKAKRFLI 425

Query: 415 HLCG 418
              G
Sbjct: 426 RFNG 429


>gi|301307637|ref|ZP_07213594.1| tyrosine--tRNA ligase [Bacteroides sp. 20_3]
 gi|300834311|gb|EFK64924.1| tyrosine--tRNA ligase [Bacteroides sp. 20_3]
          Length = 430

 Score =  258 bits (658), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 146/427 (34%), Positives = 227/427 (53%), Gaps = 22/427 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG I  +    E  +   + + +AY+G D TA SLH GHL  +M+L   Q+ 
Sbjct: 2   NFVEELRWRGMIADMMPGTEEQL--QKELTSAYVGIDPTADSLHIGHLVSVMMLKHFQRA 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL-M 125
           GH+PI+L+GG T +IGDPS +   R ++    ++ N + IK   + F+ + +   +A  +
Sbjct: 60  GHRPIALVGGATGMIGDPSMKSAERNLLDEATLRHNQDCIKKQLAKFLDFDSEAPNAAKL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQS--LSFLEFNYMILQAYD 183
           +NN  W+    +++ +R+IG   +VN M++ +SV+ RL RE S  +SF EF+Y +LQ YD
Sbjct: 120 VNNYDWMKGYSFLNFIRDIGKHITVNYMMAKDSVKKRLSRESSVGMSFTEFSYQLLQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           ++ L ++  CRLQMGG+DQWGNI  G +L  R    + +ALT PL+T A G K GKT SG
Sbjct: 180 YLYLYEHEGCRLQMGGTDQWGNITTGTELIRRTLGGEAYALTCPLITKADGGKFGKTESG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPM--SEIDRMAKLQGKEINEAKKI 301
            IWL++  TSPY F+Q+W N+ DAD   + K  T L           +     +   +K 
Sbjct: 240 NIWLDRRYTSPYKFYQFWLNVSDADAAKYIKIFTDLSQEEIAALEAEQEAAPHLRPLQKR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDEVS 347
           +A E+T MVH  E+ E A  A+   F  S H               + +P   IS+DE++
Sbjct: 300 LAKEVTVMVHSLEDYEAAVEASNILFGNSTHEALLKLDEDTLLAVFEGVPHFDISRDELA 359

Query: 348 RGMGLLTLIV-KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+  + L   KA    S  E R+ ++S  +  N   ++     I          + +  
Sbjct: 360 AGIKAVDLCTEKAAIFPSKGEMRKLVQSGGVSFNKEKLAEVDTVIDCSSLLDDKYLLVQR 419

Query: 407 GKKNHII 413
           GKKN+ +
Sbjct: 420 GKKNYYL 426


>gi|73662343|ref|YP_301124.1| tyrosyl-tRNA synthetase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
 gi|97202126|sp|Q49YG2|SYY_STAS1 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|72494858|dbj|BAE18179.1| tyrosyl-tRNA synthetase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
          Length = 420

 Score =  258 bits (658), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 140/386 (36%), Positives = 215/386 (55%), Gaps = 20/386 (5%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L  RG I+Q ++   ++ + ++  VT Y G D TA SLH GHL   + L   Q+ G
Sbjct: 5   LLEDLKWRGLIYQQTDESGIENILNKEQVTLYCGADPTADSLHIGHLLPFLTLRRFQEHG 64

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+P+ L+GGGT +IGDPS + E R +    +++ N++ I        ++ T K  A ++N
Sbjct: 65  HRPLVLIGGGTGMIGDPSGKSEERTLQTEAQVETNVQGINKQMHKIFEFDTEKG-AKLVN 123

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N+ WL  I  ID LR+ G    VN ML  +S+++RL  E  +S+ EF Y ILQA DF  L
Sbjct: 124 NKDWLGQISLIDFLRDYGKHVGVNYMLGKDSIQTRL--EHGISYTEFTYTILQAIDFGHL 181

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERL-KTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
            + Y+C++Q+GGSDQWGNI  GI+L  R+    + + LT PL+  + G K GKT  GA+W
Sbjct: 182 NRTYNCKVQVGGSDQWGNITSGIELMRRMYGQTEAYGLTIPLVVKSDGKKFGKTEGGAVW 241

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIAT 304
           L+   TSPY F+Q+W N  D DV+ F K  T L   EI+ + K   +   + EA+K +A 
Sbjct: 242 LDAAKTSPYEFYQFWINTTDDDVIKFLKYFTFLEQEEIEALEKSLNEAPHLREAQKALAE 301

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLT 354
            +T  +HG++  + A   +   F   + S          + +P + +S    S    ++ 
Sbjct: 302 NVTRFIHGQDALDDAIRISQALFAGDLQSLSASELKEGFKDVPQVELS----SETRNIVE 357

Query: 355 LIVKAGFATSTNEARRHLKSNAIKIN 380
           +IV+ G ++S  +AR  + + AI IN
Sbjct: 358 VIVETGISSSKRQAREDVNNGAIYIN 383


>gi|71892149|ref|YP_277881.1| tyrosyl-tRNA synthetase [Candidatus Blochmannia pennsylvanicus str.
           BPEN]
 gi|97197550|sp|Q492T7|SYY_BLOPB RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|71796255|gb|AAZ41006.1| tyrosyl-tRNA synthetase [Candidatus Blochmannia pennsylvanicus str.
           BPEN]
          Length = 427

 Score =  257 bits (657), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 153/385 (39%), Positives = 223/385 (57%), Gaps = 12/385 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D + +L ER  I QI+N   L  +     +T Y G+D T+ SLH GHL  L+ L   Q  
Sbjct: 7   DIIQLLYERDLIAQITNQEALIKILKSKSITLYCGFDPTSDSLHIGHLVPLLCLRQFQIF 66

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK-TDALM 125
           GH+PI L+GGGT +IGDPSF+D  R++   + +Q+ IEKIK   S F+ +   + + A +
Sbjct: 67  GHRPIILLGGGTGLIGDPSFKDSERKLNLIETVQKWIEKIKYQVSLFVDFSHSQYSQACI 126

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYDF 184
           +NN  WL SI  +  LR+IG FFSVN+M++ ++++ RL++    +S+ EF+Y +LQ+YDF
Sbjct: 127 VNNYDWLSSISLLTFLRDIGKFFSVNKMINKDAIKKRLQKNNYGISYTEFSYNLLQSYDF 186

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L KNY+  LQ+GGSDQWGNII GIDL  R+     + LT PLLT +  TK GKT    
Sbjct: 187 TYLHKNYNAILQIGGSDQWGNIISGIDLIHRIYKRTTYGLTMPLLTKSDNTKFGKTEKHT 246

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN---EAKKI 301
           IWL+ + TSPY F+QYW N  D +V  F K  T + +  I+ + K + K  N   +A+ I
Sbjct: 247 IWLDAKKTSPYTFYQYWINTSDEEVYRFLKFFTNIDVDAINTLKK-EDKMKNTKPQAQII 305

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTL 355
           +A EIT +VHG+   + A       F   IH       + +    I    +  G+ L   
Sbjct: 306 LAEEITRLVHGKSGLKTAQKITRNLFTGQIHKLTLDDFEQLFQDGIPTVPLKAGITLQQA 365

Query: 356 IVKAGFATSTNEARRHLKSNAIKIN 380
           +V++    S  +AR  + SN+I +N
Sbjct: 366 LVESKLVVSRAQARELISSNSITVN 390


>gi|300779179|ref|ZP_07089037.1| tyrosine--tRNA ligase [Chryseobacterium gleum ATCC 35910]
 gi|300504689|gb|EFK35829.1| tyrosine--tRNA ligase [Chryseobacterium gleum ATCC 35910]
          Length = 431

 Score =  257 bits (657), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 154/411 (37%), Positives = 226/411 (54%), Gaps = 24/411 (5%)

Query: 28  DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFR 87
           D   ++ V TAYIG+D TA SLH G L Q+ +L   Q+ GHKPI+L+GG T +IGDPS +
Sbjct: 22  DEQLNKEVTTAYIGFDPTADSLHIGSLIQIKILAHFQQHGHKPIALVGGATGMIGDPSGK 81

Query: 88  DESRRMMRSQEIQENIEKIKGIFSSFIKY-GTGKTDALMLNNETWLCSIKYIDLLREIGS 146
              R ++  + +   ++ +K   S F+ + G     A ++NN  W+ +I ++D  + IG 
Sbjct: 82  SAERNLLDEETLLHYVDCLKNQLSKFLNFEGNEPNKAELVNNYDWMKNISFLDFAKNIGK 141

Query: 147 FFSVNRMLSFESVRSRLKRE---QSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQW 203
             +VN M++ +SV+ R   E     +SF EF Y ++Q YDF+ L +N + +LQMGGSDQW
Sbjct: 142 NITVNYMMAKDSVKKRFSGEGGADGMSFTEFTYQLIQGYDFLHLYQNNNVKLQMGGSDQW 201

Query: 204 GNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA-IWLNKEMTSPYNFWQYWR 262
           GNI  G +L  R    + FALT PL+T A G+K GK+ SG   WL+K+ TSPY F+Q+W 
Sbjct: 202 GNITTGTELIRRKAQGEAFALTVPLITKADGSKFGKSESGENYWLDKKKTSPYKFYQFWL 261

Query: 263 NIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAK--KIIATEITTMVHGREEAEKAA 320
           N  D D   F K  T L   EI+ + +      +E K  K +A E+T  VHGREE EKA 
Sbjct: 262 NATDEDAERFIKFYTFLGKEEIEALIEEHKTAPHERKLQKKLAEEVTVWVHGREEYEKAL 321

Query: 321 TAAMECFDMSIHS--------------QHMPTISISKDEVSRGMGLLTLIV-KAGFATST 365
            A+   F  S                   +P   I+K +V  G+ ++ L+  K+GF  S 
Sbjct: 322 KASEILFGRSTAEDLVSLDEETFLEVFDGVPQKEIAKADV-LGVNIVDLLSEKSGFLKSK 380

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +EA+R +K NAI +N   + N+       D      + L  GKK++ I  +
Sbjct: 381 SEAQREIKGNAISVNKQKV-NDTFTANETDLIDGKFLLLQKGKKSYFIVKV 430


>gi|27468324|ref|NP_764961.1| tyrosyl-tRNA synthetase [Staphylococcus epidermidis ATCC 12228]
 gi|57867255|ref|YP_188865.1| tyrosyl-tRNA synthetase [Staphylococcus epidermidis RP62A]
 gi|282875850|ref|ZP_06284717.1| tyrosine--tRNA ligase [Staphylococcus epidermidis SK135]
 gi|293366325|ref|ZP_06613005.1| tyrosine-tRNA ligase [Staphylococcus epidermidis M23864:W2(grey)]
 gi|81674179|sp|Q5HNH6|SYY_STAEQ RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|81843652|sp|Q8CS48|SYY_STAES RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|27315870|gb|AAO05005.1|AE016748_239 tyrosyl-tRNA synthetase [Staphylococcus epidermidis ATCC 12228]
 gi|57637913|gb|AAW54701.1| tyrosyl-tRNA synthetase [Staphylococcus epidermidis RP62A]
 gi|281294875|gb|EFA87402.1| tyrosine--tRNA ligase [Staphylococcus epidermidis SK135]
 gi|291319563|gb|EFE59929.1| tyrosine-tRNA ligase [Staphylococcus epidermidis M23864:W2(grey)]
 gi|329737273|gb|EGG73527.1| tyrosine--tRNA ligase [Staphylococcus epidermidis VCU028]
 gi|329737483|gb|EGG73736.1| tyrosine--tRNA ligase [Staphylococcus epidermidis VCU045]
          Length = 421

 Score =  257 bits (657), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 138/379 (36%), Positives = 216/379 (56%), Gaps = 20/379 (5%)

Query: 15  RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLM 74
           RG I+Q ++   ++ L ++  VT Y G D TA SLH GHL   + L   Q+ GH+PI L+
Sbjct: 12  RGLIYQQTDEEGIEELLNKEQVTLYCGADPTADSLHIGHLLPFLTLRRFQEHGHRPIVLI 71

Query: 75  GGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCS 134
           GGGT +IGDPS + E R +    +++ N++ +        ++G+ K  A ++NN+ WL  
Sbjct: 72  GGGTGMIGDPSGKSEERVLQTESQVEANVKGLSNQMHRLFEFGSDK-GAKLVNNKDWLGQ 130

Query: 135 IKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCR 194
           I  I  LR+ G    VN ML  +S+++RL  E  +S+ EF Y ILQA DF  L +  +C+
Sbjct: 131 ISLISFLRDYGKHVGVNYMLGKDSIQTRL--EHGISYTEFTYTILQAIDFGYLNRELNCK 188

Query: 195 LQMGGSDQWGNIICGIDLGERL-KTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTS 253
           +Q+GGSDQWGNI  GI+L  R+    + + LT PL+T + G K GK+ SGA+WL+ E TS
Sbjct: 189 IQVGGSDQWGNITSGIELMRRMYGQTEAYGLTIPLVTKSDGKKFGKSESGAVWLDPEKTS 248

Query: 254 PYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKKIIATEITTMVH 311
           PY F+Q+W N  D DV+ F K  T L   EI+R+  +K +   + EA+K +A  +T  +H
Sbjct: 249 PYEFYQFWINQSDEDVIKFLKYFTFLEKEEINRLEQSKNEAPHLREAQKALAENVTKFIH 308

Query: 312 GREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIVKAGF 361
           G    + A   +   F   + S          + +P +++S    ++   ++  +++ G 
Sbjct: 309 GEAALKDAIRISKALFSGDLKSLSAKELKEGFKDVPQVTLS----TKTTNIVEALIETGI 364

Query: 362 ATSTNEARRHLKSNAIKIN 380
           A+S  +AR  + + AI IN
Sbjct: 365 ASSKRQAREDVNNGAIYIN 383


>gi|329727870|gb|EGG64320.1| tyrosine--tRNA ligase [Staphylococcus epidermidis VCU144]
          Length = 421

 Score =  257 bits (657), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 138/379 (36%), Positives = 216/379 (56%), Gaps = 20/379 (5%)

Query: 15  RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLM 74
           RG I+Q ++   ++ L ++  VT Y G D TA SLH GHL   + L   Q+ GH+PI L+
Sbjct: 12  RGLIYQQTDEEGIEELLNKEQVTLYCGADPTADSLHIGHLLPFLTLRRFQEHGHRPIVLI 71

Query: 75  GGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCS 134
           GGGT +IGDPS + E R +    +++ N++ +        ++G+ K  A ++NN+ WL  
Sbjct: 72  GGGTGMIGDPSGKSEERVLQTESQVEANVKGLSNQMHRLFEFGSDK-GAKLVNNKDWLGQ 130

Query: 135 IKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCR 194
           I  I  LR+ G    VN ML  +S+++RL  E  +S+ EF Y ILQA DF  L +  +C+
Sbjct: 131 ISLISFLRDYGKHVGVNYMLGKDSIQTRL--EHGISYTEFTYTILQAIDFGYLNRELNCK 188

Query: 195 LQMGGSDQWGNIICGIDLGERL-KTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTS 253
           +Q+GGSDQWGNI  GI+L  R+    + + LT PL+T + G K GK+ SGA+WL+ E TS
Sbjct: 189 IQVGGSDQWGNITSGIELMRRMYGQTEAYGLTIPLVTKSDGKKFGKSESGAVWLDPEKTS 248

Query: 254 PYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKKIIATEITTMVH 311
           PY F+Q+W N  D DV+ F K  T L   EI+R+  +K +   + EA+K +A  +T  +H
Sbjct: 249 PYEFYQFWINQSDEDVIKFLKYFTFLEKEEINRLEQSKNEAPHLREAQKALAENVTKFIH 308

Query: 312 GREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIVKAGF 361
           G    + A   +   F   + S          + +P +++S    ++   ++  +++ G 
Sbjct: 309 GEAALKDAIRISKALFSGDLKSLSAKELKEGFKDVPQVTLS----TKTTNIVEALIETGI 364

Query: 362 ATSTNEARRHLKSNAIKIN 380
           A+S  +AR  + + AI IN
Sbjct: 365 ASSKRQAREDVNNGAIYIN 383


>gi|302561395|ref|ZP_07313737.1| tyrosyl-tRNA synthetase [Streptomyces griseoflavus Tu4000]
 gi|302479013|gb|EFL42106.1| tyrosyl-tRNA synthetase [Streptomyces griseoflavus Tu4000]
          Length = 422

 Score =  257 bits (657), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 146/415 (35%), Positives = 231/415 (55%), Gaps = 13/415 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +D +  L  RG   Q ++   L  + + G VT Y G+D TA SLH GHL Q++ L  LQ+
Sbjct: 2   TDIVDELKWRGLFAQSTDEDALRKVLADGPVTFYCGFDPTAPSLHVGHLVQVLTLRRLQQ 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQE-IQENIEKIKGIFSSFIKYGTGKTDAL 124
            GH+P++L+GG T  IGDP  R  + R + + E +   +E+++G    F+ +  G+  A 
Sbjct: 62  AGHRPLALVGGATGQIGDP--RPTAERTLNAPETVAGWVERLRGQIEPFLTF-EGENAAT 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M+NN  W  ++  I+ LR+IG  F VN+ML+ +SV  RL+  + +S+ EF+Y +LQA DF
Sbjct: 119 MVNNLDWTQNLSAIEFLRDIGKHFRVNKMLTKDSVARRLESSEGISYTEFSYQLLQAMDF 178

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT-PKLFALTSPLLTTASGTKMGKTLSG 243
           ++L + + C LQ GGSDQWGN+  G+DL  RL+    + A  +PL+T A GTK GKT  G
Sbjct: 179 LQLYRRHGCVLQQGGSDQWGNLTAGLDLIHRLEPDASVHAYATPLMTKADGTKFGKTEGG 238

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE--INEAKKI 301
           A+WL+ EMT+PY F+Q+W N+DD D+  + + L+    +E++ + K   +      A++ 
Sbjct: 239 AVWLDPEMTTPYAFYQFWLNVDDRDISGYMRILSFRSRAELEELEKQTAERPQARAAQRA 298

Query: 302 IATEITTMVHGREE------AEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTL 355
           +A E+TT+VHG  +      A KA     E  ++   +       +    V+    ++ L
Sbjct: 299 LAEELTTLVHGAGQTAAVIAASKALFGQGELGELDDRTLAAALSEVPHVRVTELGPVVDL 358

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
             + G   S + ARR +K     +NN  ++ E      +D      + L  GKKN
Sbjct: 359 FAEVGLVPSKSAARRTVKEGGAYVNNVKVTAEDAVPATEDLLHGRWLVLRRGKKN 413


>gi|262091699|gb|ACY25289.1| tyrosyl-tRNA synthetase [uncultured actinobacterium]
          Length = 427

 Score =  257 bits (657), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 142/386 (36%), Positives = 222/386 (57%), Gaps = 16/386 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D ++  + RG IH  ++  EL    +   ++AY+G+D T+ SLH G+L   + L  LQ  
Sbjct: 9   DVVAEFAARGLIHDSTDREELSKRTTSSQISAYVGFDPTSDSLHVGNLLGQISLRRLQLL 68

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI L GG T ++GDPS + E R ++ ++++  N++ IK      + + +G   AL++
Sbjct: 69  GHRPIVLAGGATGMVGDPSGKSEERNLLDAEQLAHNVQSIKRQLECILDF-SGPNAALLV 127

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           +N  W  + K +D LR++G   +VN+M++ +SV+SR+     LS+ EF+YM+LQA DF  
Sbjct: 128 DNADWTKNAKMLDFLRDVGKHITVNQMMAKDSVKSRISDGNGLSYTEFSYMLLQANDFRY 187

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L +++ C +QMGGSDQWGNI  G DL  +      + LT PL+T A GTK GKT  GA+W
Sbjct: 188 LCEHHQCEMQMGGSDQWGNITAGTDLIRKTLGRSAYGLTWPLITKADGTKFGKTADGAVW 247

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINEAKKIIAT 304
           L+   TSPY F Q+W  I DAD+     + +   M+EI  +   Q +  E   A++ +A 
Sbjct: 248 LDARRTSPYQFRQFWMQIADADIEHMLPKFSLRSMNEIAEILADQKRTPESRVAQRTLAR 307

Query: 305 EITTMVHGREEAEKAATAAMECF--------DMSIH--SQHMPTISISKDEVSRGMGLLT 354
           E+T M+HG E A+ A  AA   F          ++H  +  + + SI    +S  +G+L 
Sbjct: 308 ELTVMLHGEEAADAAEQAADVLFGAHPVSASPAALHLIASEVASSSIGAAALSDAVGIL- 366

Query: 355 LIVKAGFATSTNEARRHLKSNAIKIN 380
             V  G A+S +EARR L   +++ N
Sbjct: 367 --VTTGLASSNSEARRLLSQRSVRAN 390


>gi|270291482|ref|ZP_06197703.1| tyrosyl-tRNA synthetase [Pediococcus acidilactici 7_4]
 gi|270279979|gb|EFA25816.1| tyrosyl-tRNA synthetase [Pediococcus acidilactici 7_4]
          Length = 417

 Score =  257 bits (657), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 152/424 (35%), Positives = 224/424 (52%), Gaps = 33/424 (7%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I+Q ++   L  L  +  +  Y G D T  S+H GHL   M+L   Q+ GHKP+
Sbjct: 7   LDWRGAINQQTDEEGLKKLTEEKSIGLYAGIDPTGDSMHIGHLIPFMVLKRFQQAGHKPV 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+GGGT  IGDPS +   R +   +++  N + +K     F     G  +  ++NN  W
Sbjct: 67  ILIGGGTGSIGDPSGKKSERVLQSMEQVHHNEDALKKQLVKFF----GTDNFRIVNNYDW 122

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L  +  +D LR+ G  F+VN ML+ + V SRL  E  +SF EF Y ILQ+ DF+ L K+ 
Sbjct: 123 LSKMSLLDFLRDYGKLFNVNTMLAKDIVASRL--EVGISFTEFTYQILQSVDFLHLYKHE 180

Query: 192 DCRLQMGGSDQWGNIICGIDLGERL--KTPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
           D +LQ+GG DQWGNI  G DL  R+  +  K++ LT PLL  A GTK GK+  G +WL+ 
Sbjct: 181 DVQLQIGGGDQWGNITAGTDLIHRMEGQDAKVYGLTIPLLLKADGTKFGKSEGGNVWLDP 240

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIATEIT 307
           E T+PY F+Q+W N DD DVV F K  T L   EI+R+A+      E  EA++ +A E+T
Sbjct: 241 EKTTPYEFYQFWLNQDDRDVVKFLKYFTFLSHEEIERLAETVKTAPEKREAQRRLAEEVT 300

Query: 308 TMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIV 357
             VHG+   E+A   +   F   +            ++MP++ +   E  +   +L L+ 
Sbjct: 301 EFVHGKAAVEEAQHISAALFSGDVKDLTASEIEQGFKNMPSVEV---ENKKENIVLWLVD 357

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF-----GKKNHI 412
                 S  +AR  +K+ AI+IN   I++   +I     D T +    F     GKK + 
Sbjct: 358 TTKIEPSRRQAREDIKNGAIRINGEKITDVDAEI-----DPTSHFDGKFVIVRRGKKKYF 412

Query: 413 ICHL 416
           +  +
Sbjct: 413 LARV 416


>gi|311899091|dbj|BAJ31499.1| putative tyrosyl-tRNA synthetase [Kitasatospora setae KM-6054]
          Length = 421

 Score =  257 bits (657), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 144/421 (34%), Positives = 233/421 (55%), Gaps = 12/421 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +D +  L  RG I   ++   L    + G VT Y G+D TA SLH G+L QL+ +  +Q+
Sbjct: 2   TDIVDELQWRGLIALSTDEDALRKAFADGPVTFYCGFDPTAPSLHLGNLVQLLTMRRIQR 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQE-IQENIEKIKGIFSSFIKYGTGKTDAL 124
            G+ P+ L+GG T +IGDP  +  + R++   E +   +++++   S F+ +  G+  A 
Sbjct: 62  AGNLPLGLVGGATGLIGDP--KPTAERVLNDPETVAAWVDRLRAQVSRFLDF-EGEYAAR 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           ++NN  W   +  I LLR++G +F VN M++ E+V  RL  +  +S+ EF+Y ILQ  DF
Sbjct: 119 IVNNLDWTSGMSAISLLRDVGKYFRVNNMIAKEAVARRLNSDAGISYTEFSYQILQGMDF 178

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL + Y C LQ GGSDQWGN+  G DL  + ++  + AL +PL+T A GTK GKT SG 
Sbjct: 179 LELNRRYGCTLQTGGSDQWGNLTAGTDLIRKAESRSVHALATPLITKADGTKFGKTESGT 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKII 302
           +WL+ E+T+PY F+Q+W N DD DV  F +  +     EI+++ +   +      A++ +
Sbjct: 239 VWLDPELTTPYAFYQFWLNADDRDVAKFLRIFSFRTREEIEQLERDTAERPAARLAQRAL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECF------DMSIHSQHMPTISISKDEVSRGMGLLTLI 356
           A E+TT+VHG ++ E+   A+   F      D+   +       + K  V+    ++ L+
Sbjct: 299 AEELTTLVHGADQYERVVAASKALFGQGDLVDLEPATLASALAEVPKATVAELGQIVDLL 358

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V+ G A S + ARR +K     +NN+ +++E+      D      I L  GK+N     L
Sbjct: 359 VETGLAPSRSGARRTIKEGGAYLNNAKVTDEEAVATTTDLLHGRWILLRRGKRNLAAVEL 418

Query: 417 C 417
            
Sbjct: 419 A 419


>gi|258648857|ref|ZP_05736326.1| tyrosine--tRNA ligase [Prevotella tannerae ATCC 51259]
 gi|260850876|gb|EEX70745.1| tyrosine--tRNA ligase [Prevotella tannerae ATCC 51259]
          Length = 431

 Score =  257 bits (656), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 147/428 (34%), Positives = 226/428 (52%), Gaps = 23/428 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG +HQ+    E   L  +  VTAY+G D TA SLH GHL  +M+L   Q  
Sbjct: 2   NFVEELRWRGMLHQLMPGTEE--LIQKERVTAYVGIDPTADSLHIGHLCGVMMLRLFQHC 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL-M 125
           GHKP++L+GG T +IGDPS + + R ++  + +  NI  IK     F+ + +   +A  +
Sbjct: 60  GHKPLALIGGATGMIGDPSGKSQERNLLNEETLAHNINGIKKQLERFLDFNSDAPNAAEL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQAYD 183
           +NN  W+ +  +++ +R+IG   +VN M++ +SV+ RL  E    LSF EF+Y +LQ YD
Sbjct: 120 VNNYDWMKNYSFLEFVRDIGKHITVNYMMAKDSVQKRLNGEARDGLSFTEFSYQLLQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTL 241
           F+ L K  +C+LQMGGSDQWGNI  G +L  R   P  +++ALT PL+T A G K GKT 
Sbjct: 180 FLYLYKTKNCKLQMGGSDQWGNITTGSELIRRTLGPDNEVYALTCPLITKADGRKFGKTE 239

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN--EAK 299
           SG IWL+ E T+PY F+Q+W N+ D +   + K  T L   E++ +      +    + +
Sbjct: 240 SGNIWLDAERTTPYEFYQFWLNVSDEEAARYIKIFTLLGREEVEALIAEHSLDPGRRQLQ 299

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDE 345
           + +  E+T MVHGREE EKA  A    F  +                   +P   +++ E
Sbjct: 300 RRLGEEVTVMVHGREEYEKALAATEILFGKATKESLLKLDEKTLLAVFSGVPHFEVARAE 359

Query: 346 VSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLS 405
                 +     K     S  E R+ ++   + +N   +S     I  +D      + + 
Sbjct: 360 AVGAKAVDLFAEKTQCFASKGEMRKLVQGGGVSLNKEKLSAFDKTITEEDLLDGKYLLVQ 419

Query: 406 FGKKNHII 413
            GKKN+ +
Sbjct: 420 RGKKNYYL 427


>gi|237785437|ref|YP_002906142.1| Tyrosyl-tRNA synthetase [Corynebacterium kroppenstedtii DSM 44385]
 gi|237758349|gb|ACR17599.1| Tyrosyl-tRNA synthetase [Corynebacterium kroppenstedtii DSM 44385]
          Length = 444

 Score =  257 bits (656), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 146/401 (36%), Positives = 224/401 (55%), Gaps = 18/401 (4%)

Query: 2   PAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
           P  ++  +  L  RG I+Q ++   L      G++T Y G+D T  SLHAGHL  L++L 
Sbjct: 13  PDARAAVIEDLQWRGLINQSTDLDLLKQAARDGMLTLYTGFDPTGPSLHAGHLVPLLMLK 72

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG---- 117
             Q+ GH+PI L GG T +IGDP    E R M+ +  + E  E I      F+ +     
Sbjct: 73  RFQQAGHRPIVLAGGATGMIGDPREVGE-RAMLAADTVSEWAENISSQLRRFVSFEGDPD 131

Query: 118 -TGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNY 176
            +G   A++ NN TW   +  I+ LR++G  FS+N MLS ++V+ RL+ +  +S+ EF+Y
Sbjct: 132 FSGNNGAILENNYTWTSQMSAIEYLRDLGKNFSLNTMLSRDTVKRRLEGD-GISYTEFSY 190

Query: 177 MILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTK 236
           M+LQA DFVEL + YDCR+Q+GGSDQWGNI+ G+DL  R+    +  +T PL+T + G K
Sbjct: 191 MLLQANDFVELRRRYDCRVQIGGSDQWGNIVGGVDLNRRVDNEVVHGITVPLVTDSEGKK 250

Query: 237 MGK-TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI 295
            GK T  G +WL+ EMTSPY+++QY+ N  DADV+ + +  T L   E+  +     +  
Sbjct: 251 FGKSTGGGKLWLDPEMTSPYSWYQYFLNSADADVIRYLRWFTFLDREELKDLETETQERP 310

Query: 296 NE--AKKIIATEITTMVHGREEAEKAATAAMECF--------DMSIHSQHMPTISISKDE 345
           ++  A+K +A E+TT+VHG E  +    A+   F        D S     +    I++  
Sbjct: 311 HKRAAQKRLAQEMTTLVHGAEATKSVELASQALFGRGELRDLDSSTLKGALSETEIAEFP 370

Query: 346 VSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISN 386
                 ++ L+V++  A S   ARR +K     +NN  +S+
Sbjct: 371 QGAEPTIVDLLVESKLAPSKGAARRTVKEGGAYVNNERVSD 411


>gi|184152797|ref|YP_001841138.1| tyrosyl-tRNA synthase [Lactobacillus reuteri JCM 1112]
 gi|227364462|ref|ZP_03848552.1| tyrosine--tRNA ligase [Lactobacillus reuteri MM2-3]
 gi|325683661|ref|ZP_08163177.1| tyrosine--tRNA ligase [Lactobacillus reuteri MM4-1A]
 gi|183224141|dbj|BAG24658.1| tyrosyl-tRNA synthase [Lactobacillus reuteri JCM 1112]
 gi|227070555|gb|EEI08888.1| tyrosine--tRNA ligase [Lactobacillus reuteri MM2-3]
 gi|324978011|gb|EGC14962.1| tyrosine--tRNA ligase [Lactobacillus reuteri MM4-1A]
          Length = 420

 Score =  257 bits (656), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 156/424 (36%), Positives = 237/424 (55%), Gaps = 24/424 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D L+ L  RG I+Q+++   L  L S+  +  Y G D T  SLH GHL   M+L   Q  
Sbjct: 6   DILNELEWRGAINQVTDEEGLRKLTSEDKIALYCGTDPTGDSLHIGHLIPFMILKRFQLA 65

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P+ ++GGGT  IGDPS R   R++    ++  N E +    ++ +K   G  +  ++
Sbjct: 66  GHHPVIIIGGGTGAIGDPSGRKSERQLQTMDQVHHNEEAL----TAQMKKLFGTENFTIV 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  I  +D LR+ G  F++N ML+ E V SRL  +  +SF EF Y ILQ+ DF+ 
Sbjct: 122 NNYEWLSKISLLDFLRDYGKLFNINTMLNKEVVASRL--DAGISFTEFTYQILQSVDFLH 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSGA 244
           L ++ D +LQ+GGSDQWGNI  GIDL  +++ P  K++ LT PL+  A GTK GKT  GA
Sbjct: 180 LYRHNDVQLQIGGSDQWGNITAGIDLIHKVEGPDTKVYGLTIPLMLKADGTKFGKTAGGA 239

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKII 302
           IWL+ E TSPY F+Q+W N DD DV+ + K  T L   EID +A+   KE    EA++ +
Sbjct: 240 IWLDPEKTSPYEFYQFWINQDDRDVIKYLKYFTFLSKEEIDDLAEKVEKEPWKREAQRRL 299

Query: 303 ATEITTMVHGREEAEKAATAAMECF-----DMSIHS-----QHMPTISISKDEVSRGMGL 352
           A E+T  VHG+E  E+A   +   F     D+S+       ++MP++ +     ++   +
Sbjct: 300 AQEVTKFVHGQEAVEEAERISKALFSGDVADLSVAEIEQGFKNMPSVDVE----NKKENI 355

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           +  +   G   S  +AR+ + S AI+IN   + +   +I  Q   +   + +  GKK++ 
Sbjct: 356 IIWLTDNGIEPSRRQARQDVSSGAIRINGEKVDDVDAEIDPQAHFAGKFVIVRKGKKHYY 415

Query: 413 ICHL 416
           +  +
Sbjct: 416 LARV 419


>gi|298483303|ref|ZP_07001482.1| tyrosine--tRNA ligase [Bacteroides sp. D22]
 gi|295085907|emb|CBK67430.1| tyrosyl-tRNA synthetase [Bacteroides xylanisolvens XB1A]
 gi|298270620|gb|EFI12202.1| tyrosine--tRNA ligase [Bacteroides sp. D22]
          Length = 430

 Score =  257 bits (656), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 150/427 (35%), Positives = 228/427 (53%), Gaps = 22/427 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG +  I    E   L S+  VTAY+G D TA SLH GHL  +M+L   Q+ 
Sbjct: 2   NFVEELRWRGMLQDIMPGTEE--LLSKEQVTAYLGIDPTADSLHIGHLCGVMILRHFQRC 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD-ALM 125
           GHKP++L+GG T +IGDPS +   R ++  + ++ N   IK   + F+ + +   + A +
Sbjct: 60  GHKPLALIGGATGMIGDPSGKSAERNLLNEETLRHNQACIKKQLAKFLDFESDVPNRAEL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQAYD 183
           +NN  W+    ++D  RE+G   +VN M++ +SV+ RL  E    LSF EF Y +LQ YD
Sbjct: 120 VNNYDWMKDFTFLDFAREVGKHITVNYMMAKDSVKRRLNGEARDGLSFTEFTYQLLQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ L +   C+LQMGGSDQWGNI  G +L  R    ++FALT PL+T A G K GKT SG
Sbjct: 180 FLHLYETKGCKLQMGGSDQWGNITTGAELIRRTNGGEVFALTCPLITKADGGKFGKTESG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM-AKLQ-GKEINEAKKI 301
            IWL+   TSPY F+Q+W N+ D+D   + K  T++   EI+ + A+ Q    +   +K 
Sbjct: 240 NIWLDPRYTSPYKFYQFWLNVSDSDAERYIKIFTSIEKEEIEALIAEHQAAPHLRLLQKR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDEVS 347
           +A E+T MVH  E+   A  A+   F  +                 + +P   IS+D ++
Sbjct: 300 LAKEVTVMVHSEEDYNAAVDASNILFGNATSDALRKLDEDTLLAVFEGVPQFEISRDALA 359

Query: 348 RGMGLLTLIV-KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+  + L V  A    S  E R+ ++   + +N   ++     I   D      + +  
Sbjct: 360 EGVKAVDLFVDNAAVFASKGEMRKLVQGGGVSLNKEKLTAFDQVITTADLLDEKYLLVQR 419

Query: 407 GKKNHII 413
           GKKN+ +
Sbjct: 420 GKKNYFL 426


>gi|229032711|ref|ZP_04188672.1| Tyrosyl-tRNA synthetase [Bacillus cereus AH1271]
 gi|228728606|gb|EEL79621.1| Tyrosyl-tRNA synthetase [Bacillus cereus AH1271]
          Length = 419

 Score =  257 bits (656), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 150/419 (35%), Positives = 221/419 (52%), Gaps = 21/419 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I+Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  GH P+
Sbjct: 7   LEWRGAINQQTDEEGLRKLVEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLAGHHPV 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+GG T  IGDPS R   R++   + +Q N++ +         +G G ++  M+NN  W
Sbjct: 67  ILIGGATGTIGDPSGRQSERQLQTLEVVQHNVDALTAQMKKLFDFG-GNSEVKMVNNYDW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
              I  I+ LR+ G  FS+N ML+ + V SRL  +  +SF EF Y ILQA DF  L    
Sbjct: 126 THEINIIEFLRDYGKNFSINSMLAKDIVASRL--DTGISFTEFTYQILQAMDFHHLYTKE 183

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLK--TPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
           D +LQ+GGSDQWGNI  G+DL  +L+    K+F LT PLL  + GTK GK+  GA+WL+ 
Sbjct: 184 DVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSAGGAVWLDP 243

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN--EAKKIIATEIT 307
           E T+P+ F+Q+W N DD DVV + K  T L    ID +A     E +  EA+K++A E+T
Sbjct: 244 EKTTPFEFYQFWLNTDDRDVVKYLKYFTFLTKERIDELAVKVETEPHKREAQKVLAEEMT 303

Query: 308 TMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIV 357
             VHG E   +A       F   I S          + MPT   SK+  +    ++  +V
Sbjct: 304 KFVHGEEAFSQAVKITAALFSGDIKSLTADEIEQGFKEMPTFESSKETKN----IVEWLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             G   S  +AR  + + AI +N   +++    + +++      I +  GKKN+ +  L
Sbjct: 360 DLGIEPSRRQAREDINNGAISMNGEKVTDVGTDVTVENSFDGRFIIIRKGKKNYSLVKL 418


>gi|302866882|ref|YP_003835519.1| tyrosyl-tRNA synthetase [Micromonospora aurantiaca ATCC 27029]
 gi|302569741|gb|ADL45943.1| tyrosyl-tRNA synthetase [Micromonospora aurantiaca ATCC 27029]
          Length = 429

 Score =  257 bits (656), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 149/430 (34%), Positives = 226/430 (52%), Gaps = 20/430 (4%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           +P  +      L  RG I   +   EL  L   G  T Y+G+D TA SLH G+L Q+++ 
Sbjct: 8   LPQGRDSLTDDLLWRGLIQDSTGLDELRELLDGGSTTFYVGFDPTAPSLHIGNLMQVVMA 67

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN-IEKIKGIFSSFIKYGTG 119
             LQ+ GH+P+ L+GG T  IGDP  ++ + R +   E+    +E+I+   S F+ Y +G
Sbjct: 68  RRLQQAGHRPLLLVGGATGQIGDP--KESAERTLNPPEVIAGWVERIREQLSPFVTY-SG 124

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
           +  A ++NN  W   +  ++ LR++G  F VN+ML+ E V++RL  E  +S+ EF+Y +L
Sbjct: 125 ENAAQLVNNLDWTGEMSVVEFLRDVGKHFPVNKMLAREVVKARL--ETGISYTEFSYQLL 182

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK 239
           QA D+ EL + + CRLQ GGSDQWGNI  G+D   R     + A T+PL+T A GTK GK
Sbjct: 183 QANDYFELHRRHGCRLQYGGSDQWGNITAGVDYIRRRGAGPVEAFTTPLVTKADGTKFGK 242

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT--TLPMSEIDRMAKLQGKEINE 297
           + +G IWL+ +MTSPY F+Q+W N DD DV  + +  +  +    E    A  +  +   
Sbjct: 243 SETGTIWLDPQMTSPYAFYQFWVNADDRDVSRYLRYFSFRSREELEELEKATAERPQARL 302

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI---------SISKDEVSR 348
           A++ +A E+TT+VHG  E  +A  A+   F      +  P            +  DE+  
Sbjct: 303 AQRALAEELTTLVHGERETAQAVAASQALFGRGSLDELAPETLRAALTEAGLVHLDELPD 362

Query: 349 GMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGK 408
             GLL    ++G   S  EARR +      +NN+ IS     +   D      + L  GK
Sbjct: 363 VAGLLK---ESGLVPSMKEARRVIAEGGAYVNNTRISEVDATVSADDLLHGRYLVLRRGK 419

Query: 409 KNHIICHLCG 418
           ++     L G
Sbjct: 420 RSFAGVELRG 429


>gi|84496716|ref|ZP_00995570.1| tyrosyl-tRNA synthetase [Janibacter sp. HTCC2649]
 gi|84383484|gb|EAP99365.1| tyrosyl-tRNA synthetase [Janibacter sp. HTCC2649]
          Length = 419

 Score =  257 bits (656), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 138/400 (34%), Positives = 222/400 (55%), Gaps = 12/400 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +D L+ L  RG + Q ++   L    + G +TAY G+D TA SLH G+L QL+++  LQ+
Sbjct: 2   NDILAELQWRGLVSQTTDEGALRDALTSGPITAYCGFDPTAPSLHFGNLVQLIVMRHLQR 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQE-IQENIEKIKGIFSSFIKYGTGKTDAL 124
            GHK I L+GG T +IGDP  R  + R+++++E   E +  I+     F+ +  G   A+
Sbjct: 62  AGHKVICLVGGSTGLIGDP--RPSAERVLKTKEQTAEWVAGIQQQVQPFLDF-EGDNAAI 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M+NN  W   +  +D LR+IG  F VN+M+  ++V +RL  ++ +S+ EF+Y ILQ  DF
Sbjct: 119 MVNNLDWTAPLSALDFLRDIGKHFRVNQMVKKDAVAARLNSDEGISYTEFSYQILQGLDF 178

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL + + C LQ GG DQWGN+  G DL  +++   +  LT+PL+T ++G K GK+   A
Sbjct: 179 LELYRAHGCTLQTGGQDQWGNLTAGSDLIHKVEGDSVHLLTTPLVTDSAGNKFGKSEGNA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE--INEAKKII 302
           +WL+ EMTSPY F+QYW N++DA V+   +  T     EI  + +   +E     A++ +
Sbjct: 239 VWLSSEMTSPYAFYQYWLNVEDASVIKLVRIFTDRNQDEIAELERQVSEEPFRRAAQRAL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFD------MSIHSQHMPTISISKDEVSRGMGLLTLI 356
           A ++TT+VHG         A+   F       + + +    T  +   EVS GM +   +
Sbjct: 299 AADVTTLVHGAGATASVQAASEALFGKGDLAALDLRTLQDATAELPGGEVSSGMTMTDAL 358

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
           V  G   S N ARR +      +N   +++ +  +  + F
Sbjct: 359 VAVGLVDSRNAARRAIGDGGASVNGEKVTDPEFTLADEHF 398


>gi|148543387|ref|YP_001270757.1| tyrosyl-tRNA synthetase [Lactobacillus reuteri DSM 20016]
 gi|254783612|sp|A5VHU6|SYY_LACRD RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|148530421|gb|ABQ82420.1| tyrosyl-tRNA synthetase [Lactobacillus reuteri DSM 20016]
          Length = 416

 Score =  257 bits (656), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 156/424 (36%), Positives = 237/424 (55%), Gaps = 24/424 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D L+ L  RG I+Q+++   L  L S+  +  Y G D T  SLH GHL   M+L   Q  
Sbjct: 2   DILNELEWRGAINQVTDEEGLRKLTSEDKIALYCGTDPTGDSLHIGHLIPFMILKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P+ ++GGGT  IGDPS R   R++    ++  N E +    ++ +K   G  +  ++
Sbjct: 62  GHHPVIIIGGGTGAIGDPSGRKSERQLQTMDQVHHNEEAL----TAQMKKLFGTENFTIV 117

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  I  +D LR+ G  F++N ML+ E V SRL  +  +SF EF Y ILQ+ DF+ 
Sbjct: 118 NNYEWLSKISLLDFLRDYGKLFNINTMLNKEVVASRL--DAGISFTEFTYQILQSVDFLH 175

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSGA 244
           L ++ D +LQ+GGSDQWGNI  GIDL  +++ P  K++ LT PL+  A GTK GKT  GA
Sbjct: 176 LYRHNDVQLQIGGSDQWGNITAGIDLIHKVEGPDTKVYGLTIPLMLKADGTKFGKTAGGA 235

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKII 302
           IWL+ E TSPY F+Q+W N DD DV+ + K  T L   EID +A+   KE    EA++ +
Sbjct: 236 IWLDPEKTSPYEFYQFWINQDDRDVIKYLKYFTFLSKEEIDDLAEKVEKEPWKREAQRRL 295

Query: 303 ATEITTMVHGREEAEKAATAAMECF-----DMSIHS-----QHMPTISISKDEVSRGMGL 352
           A E+T  VHG+E  E+A   +   F     D+S+       ++MP++ +     ++   +
Sbjct: 296 AQEVTKFVHGQEAVEEAERISKALFSGDVADLSVAEIEQGFKNMPSVDVE----NKKENI 351

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           +  +   G   S  +AR+ + S AI+IN   + +   +I  Q   +   + +  GKK++ 
Sbjct: 352 IIWLTDNGIEPSRRQARQDVSSGAIRINGEKVDDVDAEIDPQAHFAGKFVIVRKGKKHYY 411

Query: 413 ICHL 416
           +  +
Sbjct: 412 LARV 415


>gi|108799921|ref|YP_640118.1| tyrosyl-tRNA synthetase [Mycobacterium sp. MCS]
 gi|119869031|ref|YP_938983.1| tyrosyl-tRNA synthetase [Mycobacterium sp. KMS]
 gi|123070071|sp|Q1B7S2|SYY_MYCSS RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|189083661|sp|A1UH85|SYY_MYCSK RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|108770340|gb|ABG09062.1| tyrosyl-tRNA synthetase [Mycobacterium sp. MCS]
 gi|119695120|gb|ABL92193.1| tyrosyl-tRNA synthetase [Mycobacterium sp. KMS]
          Length = 423

 Score =  256 bits (655), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 150/417 (35%), Positives = 238/417 (57%), Gaps = 15/417 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S  L  L  RG I Q ++   L    + G +T Y G+D TA SLHAGHL  L+ L   Q+
Sbjct: 2   SSILDELDWRGLIAQSTDRDALAAELAAGPMTLYSGFDPTAPSLHAGHLVPLLTLRRFQQ 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQE-IQENIEKIKGIFSSFIKYGTGKTDAL 124
            GH+PI L GG T +IGDP  RD   R +++ + + +  ++I+G    F+++    T A+
Sbjct: 62  AGHRPIVLAGGATGMIGDP--RDTGERTLQTADTVADWADRIRGQLERFVEFDESPTGAI 119

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           + NN +W  ++  I+ LR++G +FSVN ML  ++VR RL+ E  +S+ EF+YM+LQA D+
Sbjct: 120 VENNLSWTGALSTIEFLRDVGKYFSVNVMLDRDTVRRRLEGE-GISYTEFSYMLLQANDY 178

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           V+L K + C LQ+GGSDQWGNI+ G+ L  +     + A+T+PL+T + G K GK+  G 
Sbjct: 179 VQLRKRHGCALQIGGSDQWGNIVAGVRLVRQKLGDTVHAMTTPLVTDSEGKKFGKSTGGG 238

Query: 245 -IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKI 301
            +WL+ EMT+PY ++QY+ N  DADVV++ +  T L   E+  + +      ++  A++ 
Sbjct: 239 NLWLDPEMTTPYAWYQYFINTADADVVNYLRWFTFLEAGELAELEEATRDRPHQRTAQRR 298

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMS-IHSQHMPTISISKDEVS------RGMGLLT 354
           +A E+TT+VHG +       A+   F    + +   PT++ +  E S       G  L+T
Sbjct: 299 LARELTTLVHGEDATRSVEHASQALFGRGELAALDEPTLAAALREASVAELTPSGPDLIT 358

Query: 355 -LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            L+V  G + S   ARR +    + +NN  I +++   +  DF     + L  GK+N
Sbjct: 359 DLLVATGLSASKGAARRTIAEGGVSVNNMKIDSDEWTPQASDFLHGRWLVLRRGKRN 415


>gi|229525156|ref|ZP_04414561.1| tyrosyl-tRNA synthetase [Vibrio cholerae bv. albensis VL426]
 gi|229338737|gb|EEO03754.1| tyrosyl-tRNA synthetase [Vibrio cholerae bv. albensis VL426]
          Length = 430

 Score =  256 bits (655), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 161/422 (38%), Positives = 230/422 (54%), Gaps = 23/422 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG I Q S P E  +         Y G+D TA SLH GHL  L+LL   Q  GH+ I
Sbjct: 14  LQQRGLIAQ-STPLEALVERFAMPQVLYCGFDPTAGSLHIGHLVPLLLLKRFQNAGHQAI 72

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM-LNNET 130
           +L+GG T +IGDPSF+   R +  +Q +Q+ +  +    +  +   +    +LM +NN  
Sbjct: 73  ALIGGATGMIGDPSFKANERVLNSAQTVQQWVSDLSQQITQLMASQSENCASLMTVNNAD 132

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDFVELAK 189
           W+  I  ID  R++G  FSVN M++ ESV+ RL R +Q +SF EF+Y +LQ+YDF  L +
Sbjct: 133 WIGKINLIDFFRDVGKHFSVNTMINRESVKQRLARPDQGISFTEFSYSLLQSYDFAHLNR 192

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
            + C LQ+GG+DQWGNI+ GIDL  RL   ++  LT PL+T + GTK GKT SGA+WL  
Sbjct: 193 EFGCALQIGGNDQWGNIVSGIDLTRRLNGAEVCGLTLPLITKSDGTKFGKTESGAVWLES 252

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEIT 307
             TSPY F+Q+W N DDADV  F    T L  +EI+  R A        +A++I A  +T
Sbjct: 253 SKTSPYRFYQFWLNSDDADVYRFLAYYTFLSTAEIEEIRQADALRAGKPQAQQIFAEHVT 312

Query: 308 TMVHGRE--EAEKAATAAMECFDMSIHS---------QHMPTISISKDEVSRGMGLLTLI 356
             VHG E   A +  T A+   D+S  S           +P ++ S+ +       L L+
Sbjct: 313 RFVHGEEGLAAAQRITQALFSGDVSYLSLSELAQLELDGLPCVAASRTDSL-----LDLL 367

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           + +G A+S  +AR  L++ AI++N   +  E +      FD      L  GKK   +  L
Sbjct: 368 LSSGLASSKRQAREWLENGAIRVNGERVQQEGVLSGFALFDRY--YVLQRGKKQFALIKL 425

Query: 417 CG 418
            G
Sbjct: 426 EG 427


>gi|126435549|ref|YP_001071240.1| tyrosyl-tRNA synthetase [Mycobacterium sp. JLS]
 gi|189083660|sp|A3Q0S2|SYY_MYCSJ RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|126235349|gb|ABN98749.1| tyrosyl-tRNA synthetase [Mycobacterium sp. JLS]
          Length = 423

 Score =  256 bits (655), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 150/417 (35%), Positives = 238/417 (57%), Gaps = 15/417 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S  L  L  RG I Q ++   L    + G +T Y G+D TA SLHAGHL  L+ L   Q+
Sbjct: 2   SSILDELDWRGLIAQSTDRDALAAELAAGPMTLYSGFDPTAPSLHAGHLVPLLTLRRFQQ 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQE-IQENIEKIKGIFSSFIKYGTGKTDAL 124
            GH+PI L GG T +IGDP  RD   R +++ + + +  ++I+G    F+++    T A+
Sbjct: 62  AGHRPIVLAGGATGMIGDP--RDTGERTLQTADTVADWADRIRGQLERFVEFDESPTGAI 119

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           + NN +W  ++  I+ LR++G +FSVN ML  ++VR RL+ E  +S+ EF+YM+LQA D+
Sbjct: 120 VENNLSWTGALSTIEFLRDVGKYFSVNVMLDRDTVRRRLEGE-GISYTEFSYMLLQANDY 178

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           V+L K + C LQ+GGSDQWGNI+ G+ L  +     + A+T+PL+T + G K GK+  G 
Sbjct: 179 VQLRKRHGCALQIGGSDQWGNIVAGVRLVRQKLGDTVHAMTTPLVTDSEGKKFGKSTGGG 238

Query: 245 -IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKI 301
            +WL+ EMT+PY ++QY+ N  DADVV++ +  T L   E+  + +      ++  A++ 
Sbjct: 239 NLWLDPEMTTPYAWYQYFINTADADVVNYLRWFTFLEAGELGELEEATRDRPHQRTAQRR 298

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMS-IHSQHMPTISISKDEVS------RGMGLLT 354
           +A E+TT+VHG +       A+   F    + +   PT++ +  E S       G  L+T
Sbjct: 299 LARELTTLVHGEDATRSVEHASQALFGRGELAALDEPTLAAALREASVAELTPSGPDLIT 358

Query: 355 -LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            L+V  G + S   ARR +    + +NN  I +++   +  DF     + L  GK+N
Sbjct: 359 DLLVATGLSASKGAARRTIAEGGVSVNNVKIDSDEWTPQASDFLHGRWLVLRRGKRN 415


>gi|153216273|ref|ZP_01950366.1| tyrosyl-tRNA synthetase [Vibrio cholerae 1587]
 gi|124114362|gb|EAY33182.1| tyrosyl-tRNA synthetase [Vibrio cholerae 1587]
          Length = 434

 Score =  256 bits (655), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 160/422 (37%), Positives = 231/422 (54%), Gaps = 23/422 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG I Q S P E  +         Y G+D TA SLH GHL  L++L   Q  GH+ I
Sbjct: 18  LQQRGLIAQ-STPLEALVERFATPQVLYCGFDPTAGSLHIGHLVPLLMLKRFQNAGHQAI 76

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM-LNNET 130
           +L+GG T +IGDPSF+   R +  +Q +Q+ +  +    +  +   +    +LM +NN  
Sbjct: 77  ALIGGATGMIGDPSFKANERVLNSAQTVQQWVSDLSQQITQLMASQSENCASLMTVNNAD 136

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDFVELAK 189
           W+  I  ID  R++G  FSVN M++ ESV+ RL R +Q +SF EF+Y +LQ+YDF  L +
Sbjct: 137 WIGKINLIDFFRDVGKHFSVNAMINRESVKQRLARPDQGISFTEFSYSLLQSYDFAHLNR 196

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
            + C LQ+GG+DQWGNI+ GIDL  RL   ++  LT PL+T + GTK GKT SGA+WL  
Sbjct: 197 EFGCTLQIGGNDQWGNIVSGIDLTRRLNGAEVCGLTLPLITKSDGTKFGKTESGAVWLES 256

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEIT 307
             TSPY F+Q+W N DDADV  F    T L  +EI+  R A        +A++I+A  +T
Sbjct: 257 SKTSPYRFYQFWLNSDDADVYRFLAYYTFLSTAEIEEIRQADALRAGKPQAQQILAEHVT 316

Query: 308 TMVHGRE--EAEKAATAAMECFDMSIHS---------QHMPTISISKDEVSRGMGLLTLI 356
             VHG E   A +  T A+   D+S  S           +P ++ S+ +       L L+
Sbjct: 317 RFVHGEEGLAAAQRITQALFSGDVSYLSLSELAQLELDGLPCVAASRTDSL-----LDLL 371

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           + +G A+S  +AR  L++ AI++N   +  E +      FD      L  GKK   +  L
Sbjct: 372 LSSGLASSKRQAREWLENGAIRVNGERVQQEGVLSGFALFDRY--YVLQRGKKKFALIKL 429

Query: 417 CG 418
            G
Sbjct: 430 EG 431


>gi|89054283|ref|YP_509734.1| tyrosyl-tRNA synthetase [Jannaschia sp. CCS1]
 gi|88863832|gb|ABD54709.1| tyrosyl-tRNA synthetase [Jannaschia sp. CCS1]
          Length = 264

 Score =  256 bits (655), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 123/264 (46%), Positives = 173/264 (65%), Gaps = 2/264 (0%)

Query: 153 MLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL 212
           ML+F+SV+SRL REQ+LSF+EFNYM+LQAYD++EL + + C LQMGGSDQWGNI+ G DL
Sbjct: 1   MLAFDSVKSRLDREQALSFIEFNYMLLQAYDYLELYRRHGCVLQMGGSDQWGNIVSGADL 60

Query: 213 GERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSF 272
             R+   + F LT+PL+T A G KMGK+  GA+WLN++  S Y FWQ+WRN+DDADV   
Sbjct: 61  IRRVDAGEAFGLTTPLVTRADGKKMGKSADGAVWLNEDRMSSYEFWQWWRNVDDADVAKL 120

Query: 273 AKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIH 332
            K  T L ++E DR+  L+G +IN AK I+A E+TT+ HG E A  A   A E F+    
Sbjct: 121 LKLFTELDVAECDRLGALEGSDINSAKIILANEVTTLCHGAEAAAAAEATAREVFEKGGT 180

Query: 333 SQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
              +PT+ ++ +EV  G+ ++ LI ++G A S  +A+R +     ++N+  I+   L + 
Sbjct: 181 GDDLPTLELNTEEVGDGISIVQLITRSGLAKSGKDAKRLIAEGGARLNDEAIAEAGLMVG 240

Query: 393 LQDFDSTGNIKLSFGKKNHIICHL 416
             D  +   IKLS GKK H +  L
Sbjct: 241 ASDLGAP--IKLSAGKKRHALVVL 262


>gi|196039579|ref|ZP_03106884.1| tyrosine--tRNA ligase [Bacillus cereus NVH0597-99]
 gi|196029739|gb|EDX68341.1| tyrosine--tRNA ligase [Bacillus cereus NVH0597-99]
          Length = 420

 Score =  256 bits (655), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 149/419 (35%), Positives = 221/419 (52%), Gaps = 21/419 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG ++Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  GH P+
Sbjct: 7   LEWRGAVNQQTDEEGLRKLVEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLAGHHPV 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+GG T  IGDPS R   R++   + +Q N++ +         +G G ++  M+NN  W
Sbjct: 67  ILIGGATGTIGDPSGRQSERQLQTLEVVQHNVDALTAQMKKLFDFG-GNSEVKMVNNYDW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
              I  I+ LR+ G  FS+N ML+ + V SRL  +  +SF EF Y ILQA DF  L    
Sbjct: 126 THEINIIEFLRDYGKNFSINSMLAKDIVASRL--DTGISFTEFTYQILQAMDFHHLYTKE 183

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLK--TPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
           D +LQ+GGSDQWGNI  G+DL  +L+    K+F LT PLL  + GTK GK+  GA+WL+ 
Sbjct: 184 DVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSAGGAVWLDP 243

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN--EAKKIIATEIT 307
           E T+P+ F+Q+W N DD DVV + K  T L    ID +A     E +  EA+K++A E+T
Sbjct: 244 EKTTPFEFYQFWVNTDDRDVVKYLKYFTFLTKERIDELAAKVEAEPHKREAQKVLAEEMT 303

Query: 308 TMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIV 357
             VHG E   +A       F   I S          + MPT   SK+  +    ++  +V
Sbjct: 304 KFVHGEEALLQAVKITAALFSGDIKSLTADEIEQGFKEMPTFQSSKETKN----IVEWLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             G   S  +AR  + + AI +N   +++    + +++      I +  GKKN+ +  L
Sbjct: 360 DLGIEPSRRQAREDINNGAISMNGEKVTDVGTDVTVENSFDGRFIIIRKGKKNYSLVKL 418


>gi|167754077|ref|ZP_02426204.1| hypothetical protein ALIPUT_02365 [Alistipes putredinis DSM 17216]
 gi|167658702|gb|EDS02832.1| hypothetical protein ALIPUT_02365 [Alistipes putredinis DSM 17216]
          Length = 431

 Score =  256 bits (654), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 147/427 (34%), Positives = 229/427 (53%), Gaps = 22/427 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG IH I  P   + L  + + TAY+G D TA SLH GHL  +M+L   Q  
Sbjct: 5   NFVEELEWRGMIHSIM-PGTQEQLQKE-MSTAYVGIDPTADSLHIGHLVSVMILKHFQMC 62

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI+L+GG T +IGDPS + + R ++  + ++ N E IK   +  + + +   +A ML
Sbjct: 63  GHRPIALVGGATGMIGDPSGKSQERNLLDEKTLRHNQEAIKKQLAKLLDFESDAPNAAML 122

Query: 127 -NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDF 184
            NN  W+  I ++D +R+IG   +VN M++ +SV+ R   E + +SF EF Y ++QAYDF
Sbjct: 123 VNNYDWMKGITFLDFIRDIGKLITVNYMMAKDSVKKRFNGEGEGMSFTEFTYQLVQAYDF 182

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           + L +   C+LQ+GG+DQWGNI  G +L  R    + FALT PL+T A GTK GKT SG 
Sbjct: 183 LHLYETVGCKLQLGGADQWGNITTGTELIRRKAGGEAFALTCPLITKADGTKFGKTESGN 242

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKKII 302
           +WL+   TSPY F+Q+W N  D D   + K  T L    ID +         +   +K +
Sbjct: 243 VWLDPRYTSPYKFYQFWLNTSDEDAKRYIKIFTLLDKQTIDDLIAEHDAAPHLRILQKRL 302

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDEVSR 348
           A E+T M+H +EE EKA  A+   F  +                 + +P   I++ E+  
Sbjct: 303 AQEVTVMIHSQEEYEKAVEASNILFGGATSEALRKLDEQTLLQVFEGVPQYKIARAELI- 361

Query: 349 GMGLLTLIV-KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFG 407
           G+  + L   ++    S  E R+ +++  + +N   +++    I   D      + +  G
Sbjct: 362 GLPFIELCAERSDIFPSKGECRKMVQAGGVSLNKEKVADPMRAIAESDLIDGKYLLVQKG 421

Query: 408 KKNHIIC 414
           KKN+ + 
Sbjct: 422 KKNYYLV 428


>gi|327404296|ref|YP_004345134.1| Tyrosyl-tRNA synthetase [Fluviicola taffensis DSM 16823]
 gi|327319804|gb|AEA44296.1| Tyrosyl-tRNA synthetase [Fluviicola taffensis DSM 16823]
          Length = 426

 Score =  256 bits (654), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 144/427 (33%), Positives = 228/427 (53%), Gaps = 22/427 (5%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           K + +  L  RG +  I    E  +L  + + + Y+G+D T+ SLH G+L  +MLL   Q
Sbjct: 2   KKNVIEELRWRGMVQDIMPGLEEQLL--KEMTSGYVGFDPTSDSLHVGNLLPIMLLKHFQ 59

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GHKP +L+GG T ++GDPS +   R ++  + +  NI  ++     F+ +  G+  A 
Sbjct: 60  LAGHKPYALVGGATGMVGDPSGKSAERNLLDEKTLNHNIAAVQNQLRQFLDFEEGENKAE 119

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           ++NN  W+    +++ +R++G   +VN M + +SV+ R+  E  +SF EF+Y ++Q YDF
Sbjct: 120 LVNNFDWMRHFSFLEFIRDVGKHITVNYMSAKDSVKKRV--ETGISFTEFSYQLIQGYDF 177

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           + L KN + ++Q GGSDQWGNI  G +L  ++ + + +A T PLLT A G K GKT SG 
Sbjct: 178 LHLYKNNNVKVQFGGSDQWGNITTGTELVRKIASGEAYAFTCPLLTKADGGKFGKTESGT 237

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAK--RLTTLPMSEIDRMAKLQGKEINEAKKII 302
           +WL+ E TSPY F+Q+W N  DAD     +   L T    E       +   +   +K I
Sbjct: 238 VWLDPEKTSPYAFYQFWLNASDADATKLIRFYTLKTKEEIEAIEKEHNEAPHLRILQKAI 297

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDEVSR 348
           A E+T  VHG+E  + A  A+   F  S                   +P  ++ + E+  
Sbjct: 298 AEEVTIRVHGKEALDMAIAASNILFGKSTSEDLKKLSNDTFLSIFDGVPMATVKRSELIE 357

Query: 349 GMGLLTLIV-KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFG 407
           G+ ++ L+  K GF  S  EA+R LK+NAI +N   ++ + L +   D  +   I L  G
Sbjct: 358 GISIVDLLASKTGFLPSNGEAKRELKANAISLNKDKVA-DGLLVGPSDLINDKFILLGKG 416

Query: 408 KKNHIIC 414
           KKN+ I 
Sbjct: 417 KKNNYIV 423


>gi|49481095|ref|YP_039086.1| tyrosyl-tRNA synthetase [Bacillus thuringiensis serovar konkukian
           str. 97-27]
 gi|81394327|sp|Q6HBJ0|SYY2_BACHK RecName: Full=Tyrosyl-tRNA synthetase 2; AltName:
           Full=Tyrosine--tRNA ligase 2; Short=TyrRS 2
 gi|49332651|gb|AAT63297.1| tyrosine--tRNA ligase (tyrosyl-tRNA synthetase) [Bacillus
           thuringiensis serovar konkukian str. 97-27]
          Length = 419

 Score =  256 bits (654), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 149/419 (35%), Positives = 222/419 (52%), Gaps = 21/419 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG ++Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  GH+P+
Sbjct: 7   LEWRGAVNQQTDEEGLRKLVEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLAGHQPV 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+GG T  IGDPS R   R++   + +Q N++ +         +G G ++  M+NN  W
Sbjct: 67  ILIGGATGTIGDPSGRQSERQLQTLEVVQHNVDALTAQMKKLFDFG-GNSEVKMVNNYDW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
              I  I+ LR+ G  FS+N ML+ + V SRL  +  +SF EF Y ILQA DF  L    
Sbjct: 126 THEINIIEFLRDYGKNFSINSMLAKDIVASRL--DTGISFTEFTYQILQAMDFHHLYTKE 183

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLK--TPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
           D +LQ+GGSDQWGNI  G+DL  +L+    K+F LT PLL  + GTK GK+  GA+WL+ 
Sbjct: 184 DVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSAGGAVWLDP 243

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN--EAKKIIATEIT 307
           E T+P+ F+Q+W N DD DVV + K  T L    ID +A     E +  EA+K++A E+T
Sbjct: 244 EKTTPFEFYQFWVNTDDRDVVKYLKYFTFLTKERIDELAVKVETEPHKREAQKVLAEEMT 303

Query: 308 TMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIV 357
             VHG E   +A       F   I S          + MPT   SK+  +    ++  +V
Sbjct: 304 KFVHGEEALLQAVKITAALFSGDIKSLTADEIEQGFKEMPTFQSSKETKN----IVEWLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             G   S  +AR  + + AI +N   +++    + +++      I +  GKKN+ +  L
Sbjct: 360 DLGIEPSRRQAREDINNGAISMNGEKVTDVGTDVTVENSFDGRFIIIRKGKKNYSLVKL 418


>gi|260172698|ref|ZP_05759110.1| tyrosyl-tRNA synthetase [Bacteroides sp. D2]
 gi|315920991|ref|ZP_07917231.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|313694866|gb|EFS31701.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 430

 Score =  256 bits (654), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 147/427 (34%), Positives = 227/427 (53%), Gaps = 22/427 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG +  I    E   L S+  VTAY+G D TA SLH GHL  +M+L   Q+ 
Sbjct: 2   NFVEELRWRGMLQDIMPGTEE--LLSKEQVTAYLGIDPTADSLHIGHLCGVMILRHFQRC 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD-ALM 125
           GHKP++L+GG T +IGDPS +   R ++  + ++ N   IK   + F+ + +   + A +
Sbjct: 60  GHKPLALIGGATGMIGDPSGKSAERNLLDEETLRHNQACIKNQLAKFLDFESDVPNRAEL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQAYD 183
           +NN  W+    ++D +RE+G   +VN M++ +SV+ RL  E    LSF EF Y +LQ YD
Sbjct: 120 VNNYDWMKDFTFLDFVREVGKHITVNYMMAKDSVKRRLNGEARDGLSFTEFTYQLLQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ L +   C+LQMGGSDQWGNI  G +L  R    ++FALT PL+T A G K GKT SG
Sbjct: 180 FLHLYETKGCKLQMGGSDQWGNITTGAELIRRTNGGEVFALTCPLITKADGGKFGKTESG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKKI 301
            IWL+   TSPY F+Q+W N+ D+D   + K  T++   EI+ +     +   +   +K 
Sbjct: 240 NIWLDPRYTSPYKFYQFWLNVSDSDAERYIKIFTSIEKEEIEALIAEHQEAPHLRLLQKR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDEVS 347
           +A E+T MVH  ++   A  A+   F  +                 + +P   IS+D ++
Sbjct: 300 LAKEVTVMVHSEDDYNAAVDASNILFGNATSEALRKLDEDTLLAVFEGVPQFEISRDALA 359

Query: 348 RGMGLLTLIV-KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+  + L V  A    S  E R+ ++   + +N   ++     I   D      + +  
Sbjct: 360 EGVKAVDLFVDNAAVFASKGEMRKLVQGGGVSLNKEKLAAFDEVITTADLLDEKYLLVQR 419

Query: 407 GKKNHII 413
           GKKN+ +
Sbjct: 420 GKKNYYL 426


>gi|325191257|emb|CCA26043.1| unnamed protein product [Albugo laibachii Nc14]
          Length = 421

 Score =  256 bits (654), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 139/384 (36%), Positives = 213/384 (55%), Gaps = 13/384 (3%)

Query: 39  YIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQE 98
           Y G+D TASSLH G+L Q + L   Q +G++PI L+GG T +IGDPS R + R ++    
Sbjct: 29  YCGFDPTASSLHIGNLLQAIALRHFQLSGYRPILLIGGATGMIGDPSGRAQERSLLSDAM 88

Query: 99  IQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
           +Q N + +    S+ +      T A++LNN  W   +  +D +R +G  F +N+ML+ E+
Sbjct: 89  VQSNAKSLLNGLSNVLDLSGSTTGAIVLNNADWHGKMTVMDWMRHVGRHFRINKMLAREN 148

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
           V+ RL+ E  +SFLEF+Y + QAYDF+ L + YDC  Q+GGSDQWGNI+ G DL ++   
Sbjct: 149 VKRRLESENGISFLEFSYQLFQAYDFLHLYRQYDCHAQLGGSDQWGNIVGGCDLIKKSTG 208

Query: 219 PKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
            + F LT PLL T SG K GK+   A+WL+ + TS + F+QY+  + D DV +  K  T 
Sbjct: 209 KEAFGLTLPLLKTVSGEKYGKSAGNALWLDSKKTSVFEFYQYFLRVQDCDVENHLKCFTF 268

Query: 279 LPMSEIDRMAKLQGK--EINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS--- 333
           + + EI R+     K  E   A+K++A  +T M+HG +  +KA  A    F  +I     
Sbjct: 269 MELDEIHRIVLEHAKYPEKRLAQKMLADSVTRMIHGEDGLKKAKRATTALFSENISQLES 328

Query: 334 -------QHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISN 386
                  +H P      +E+ +   L+ ++V  G   S  EARR +    + +NN+ I +
Sbjct: 329 SDIEELVRHAPVHMKRYEEIVQ-QHLVDVMVATGICKSKAEARRLILGGGVYVNNTRIRD 387

Query: 387 EKLQIKLQDFDSTGNIKLSFGKKN 410
               I+      TG + +  GK+N
Sbjct: 388 GNHMIQSDQVIGTGFVLIRTGKRN 411


>gi|297181878|gb|ADI18056.1| tyrosyl-tRNA synthetase [uncultured actinobacterium HF0200_20K23]
          Length = 422

 Score =  256 bits (654), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 150/423 (35%), Positives = 230/423 (54%), Gaps = 21/423 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D LS L  RG IH  ++   L    + G +T Y G+D TA SLH G+L  L+ L   Q  
Sbjct: 2   DILSDLEARGLIHDTTDRDALASRLAAGPITLYCGFDPTADSLHVGNLIGLLTLRRFQMA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH PISL GG T +IGDPS RD  R ++  + +  N+E I      F+++  G++ A +L
Sbjct: 62  GHVPISLAGGATGMIGDPSGRDAERNLLDDEGLARNLEGILPQLRKFLEF-EGESAAKLL 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           +N  W   +  +D LR++G   +VN+M++ +SV+SR+     +SF EF+YM+LQ YD++ 
Sbjct: 121 DNRAWTVGVGVLDFLRDVGKHVTVNQMVAKDSVKSRMSEGGGISFTEFSYMLLQGYDYLW 180

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG-AI 245
           LA N +C LQ+GGSDQWGNI+ G+DL  R      +ALT PLLT   G+K GKT  G  I
Sbjct: 181 LADNENCELQVGGSDQWGNIVLGVDLIRRKLGQTAYALTWPLLTKPDGSKYGKTAGGETI 240

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIA 303
           WL+    SPY F+Q W  +DD++V     +LT L + EI+ +     K+  +   ++++A
Sbjct: 241 WLSPNKMSPYRFYQAWIGVDDSEVRKLLLQLTFLSLEEIEVLVAEHEKDPQQRVGQRMLA 300

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIH------------SQHMPTISISKDEVSRGMG 351
            E+T +VHG   A  A  A+   FD  +             S  +P+ +I     + G  
Sbjct: 301 GELTGIVHGEAAAASAMEASAVLFDPDVDITAVSESALEFVSGEVPSTAIQ----TLGSS 356

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN- 410
           ++ L+V++G   S  +A+R +    I +N   +++        D      + L  GKK  
Sbjct: 357 IIDLLVESGLCQSRKDAKRAITEGGIYLNGGRVADADFLPSKGDLLHQKYVLLRRGKKQW 416

Query: 411 HII 413
           H++
Sbjct: 417 HLV 419


>gi|229094185|ref|ZP_04225264.1| Tyrosyl-tRNA synthetase [Bacillus cereus Rock3-42]
 gi|228689177|gb|EEL42999.1| Tyrosyl-tRNA synthetase [Bacillus cereus Rock3-42]
          Length = 420

 Score =  256 bits (654), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 149/419 (35%), Positives = 221/419 (52%), Gaps = 21/419 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG ++Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  GH P+
Sbjct: 7   LEWRGAVNQQTDEEGLRKLVEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLAGHHPV 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+GG T  IGDPS R   R++   + +Q N++ +         +G G ++  M+NN  W
Sbjct: 67  ILIGGATGTIGDPSGRQSERQLQTLEVVQHNVDALTAQMKKLFDFG-GNSEVKMVNNYDW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
              I  I+ LR+ G  FS+N ML+ + V SRL  +  +SF EF Y ILQA DF  L    
Sbjct: 126 THEINIIEFLRDYGKNFSINSMLAKDIVASRL--DTGISFTEFTYQILQAMDFHHLYTKE 183

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLK--TPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
           D +LQ+GGSDQWGNI  G+DL  +L+    K+F LT PLL  + GTK GK+  GA+WL+ 
Sbjct: 184 DVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSAGGAVWLDP 243

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN--EAKKIIATEIT 307
           E T+P+ F+Q+W N DD DVV + K  T L    ID +A     E +  EA+K++A E+T
Sbjct: 244 EKTTPFEFYQFWVNTDDRDVVKYLKYFTFLTKERIDELAAKVETEPHKREAQKVLAEEMT 303

Query: 308 TMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIV 357
             VHG E   +A       F   I S          + MPT   SK+  +    ++  +V
Sbjct: 304 KFVHGEEALLQAVKITAALFSGDIKSLTADEIEQGFKEMPTFQSSKETKN----IVEWLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             G   S  +AR  + + AI +N   +++    + +++      I +  GKKN+ +  L
Sbjct: 360 DLGIEPSRRQAREDINNGAISMNGEKVTDVGTDVTVENSFDGRFIIIRKGKKNYSLVKL 418


>gi|229135906|ref|ZP_04264669.1| Tyrosyl-tRNA synthetase [Bacillus cereus BDRD-ST196]
 gi|228647548|gb|EEL03620.1| Tyrosyl-tRNA synthetase [Bacillus cereus BDRD-ST196]
          Length = 420

 Score =  256 bits (654), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 149/419 (35%), Positives = 222/419 (52%), Gaps = 21/419 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG ++Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  GH P+
Sbjct: 7   LEWRGAVNQQTDEEGLRKLVEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLAGHHPV 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+GG T  IGDPS R   R++   + +Q N++ +     +   +G G ++  M+NN  W
Sbjct: 67  ILIGGATGTIGDPSGRQSERQLQTLEVVQHNVDALTAQMKNLFDFG-GNSEVKMVNNYDW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
              I  I+ LR+ G  FS+N ML+ + V SRL  +  +SF EF Y ILQA DF  L    
Sbjct: 126 THKINIIEFLRDYGKNFSINSMLAKDIVASRL--DTGISFTEFTYQILQATDFHHLYTKE 183

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLK--TPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
           D +LQ+GGSDQWGNI  G+DL  +L+    K+F LT PLL  + GTK GK+  GAIWL+ 
Sbjct: 184 DVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSAGGAIWLDP 243

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN--EAKKIIATEIT 307
           E T+P+ F+Q+W N DD DV+ + K  T L    ID +A     E +  EA+K++A E+T
Sbjct: 244 EKTTPFEFYQFWVNTDDRDVIKYLKYFTFLTKERIDELAAKVETEPHKREAQKVLAEEMT 303

Query: 308 TMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIV 357
             VHG E   +A       F   I S          + MPT   SK+  +    ++  +V
Sbjct: 304 KFVHGEEAFLQAVKITAALFSGDIKSLTADEIEQGFKEMPTFQSSKETKN----IVEWLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             G   S  +AR  + + AI +N   +++    + +++      I +  GKKN+ +  L
Sbjct: 360 DLGIEPSRRQAREDINNGAISMNGEKVTDVSRDVTVENSFDGRFIIIRKGKKNYSLVEL 418


>gi|327483318|gb|AEA77725.1| Tyrosyl-tRNA synthetase cluster 1 [Vibrio cholerae LMA3894-4]
          Length = 426

 Score =  256 bits (654), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 160/422 (37%), Positives = 231/422 (54%), Gaps = 23/422 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG I Q S P E  +         Y G+D TA SLH GHL  L++L   Q  GH+ I
Sbjct: 10  LQQRGLIAQ-STPLEALVERFTTPQVLYCGFDPTAGSLHIGHLVPLLMLKRFQNAGHQAI 68

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM-LNNET 130
           +L+GG T +IGDPSF+   R +  +Q +Q+ +  +    +  +   +    +LM +NN  
Sbjct: 69  ALIGGATGMIGDPSFKANERVLNSAQTVQQWVSDLSQQITQLMASQSENCASLMTVNNAD 128

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDFVELAK 189
           W+  I  ID  R++G  FSVN M++ ESV+ RL R +Q +SF EF+Y +LQ+YDF  L +
Sbjct: 129 WIGKINLIDFFRDVGKHFSVNTMINRESVKQRLARPDQGISFTEFSYSLLQSYDFAHLNR 188

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
            + C LQ+GG+DQWGNI+ GIDL  RL   ++  LT PL+T + GTK GKT SGA+WL  
Sbjct: 189 EFGCALQIGGNDQWGNIVSGIDLTRRLNGVEVCGLTLPLITKSDGTKFGKTESGAVWLES 248

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEIT 307
             TSPY F+Q+W N DDADV  F    T L  +EI+  R A        +A++I+A  +T
Sbjct: 249 RKTSPYRFYQFWLNSDDADVYRFLAYYTFLSTAEIEEIRQADALRAGKPQAQQILAEHVT 308

Query: 308 TMVHGRE--EAEKAATAAMECFDMSIHS---------QHMPTISISKDEVSRGMGLLTLI 356
             VHG E   A +  T A+   D+S  S           +P ++ S+ +       L L+
Sbjct: 309 RFVHGEEGLAAAQRITQALFSGDVSYLSLSELAQLELDGLPCVAASRTDSL-----LDLL 363

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           + +G A+S  +AR  L++ AI++N   +  E +      FD      L  GKK   +  L
Sbjct: 364 LSSGLASSKRQAREWLENGAIRVNGERVQQEGVLSGFALFDRY--YVLQRGKKQFALIKL 421

Query: 417 CG 418
            G
Sbjct: 422 EG 423


>gi|229014257|ref|ZP_04171377.1| Tyrosyl-tRNA synthetase [Bacillus mycoides DSM 2048]
 gi|228747034|gb|EEL96917.1| Tyrosyl-tRNA synthetase [Bacillus mycoides DSM 2048]
          Length = 420

 Score =  256 bits (654), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 149/419 (35%), Positives = 221/419 (52%), Gaps = 21/419 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG ++Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  GH P+
Sbjct: 7   LEWRGAVNQQTDEEGLRKLVEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLAGHHPV 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+GG T  IGDPS R   R++   + +Q N++ +         +G G ++  M+NN  W
Sbjct: 67  ILIGGATGTIGDPSGRQSERQLQTLEVVQHNVDALTAQMKKLFDFG-GNSEVKMVNNYDW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
              I  I+ LR+ G  FS+N ML+ + V SRL  +  +SF EF Y ILQA DF  L    
Sbjct: 126 THKINIIEFLRDYGKNFSINSMLAKDIVASRL--DTGISFTEFTYQILQAMDFHHLYTKE 183

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLK--TPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
           D +LQ+GGSDQWGNI  G+DL  +L+    K+F LT PLL  + GTK GK+  GAIWL+ 
Sbjct: 184 DVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSAGGAIWLDP 243

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN--EAKKIIATEIT 307
           E T+P+ F+Q+W N DD DV+ + K  T L    ID +A     E +  EA+K++A E+T
Sbjct: 244 EKTTPFEFYQFWVNTDDRDVIKYLKYFTFLTKERIDELAAKVETEPHKREAQKVLAEEMT 303

Query: 308 TMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIV 357
             VHG E   +A       F   I S          + MPT   SK+  +    ++  +V
Sbjct: 304 KFVHGEEAFLQAVKITAALFSGDIKSLTADEIEQGFKEMPTFQSSKETKN----IVEWLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             G   S  +AR  + + AI +N   +++    + +++      I +  GKKN+ +  L
Sbjct: 360 DLGIEPSRRQAREDINNGAISMNGEKVTDVGTDVTVENSFDGRFIIIRKGKKNYSLVEL 418


>gi|145224097|ref|YP_001134775.1| tyrosyl-tRNA synthetase [Mycobacterium gilvum PYR-GCK]
 gi|315444434|ref|YP_004077313.1| tyrosyl-tRNA synthetase [Mycobacterium sp. Spyr1]
 gi|145216583|gb|ABP45987.1| tyrosyl-tRNA synthetase [Mycobacterium gilvum PYR-GCK]
 gi|315262737|gb|ADT99478.1| tyrosyl-tRNA synthetase [Mycobacterium sp. Spyr1]
          Length = 425

 Score =  256 bits (654), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 150/421 (35%), Positives = 237/421 (56%), Gaps = 25/421 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D L  L  RG I Q ++   L  + + G  T Y G+D TA SLHAGHL  L+ L   Q+ 
Sbjct: 5   DILDDLEWRGLIAQSTDREALGEMLAAGPATVYSGFDPTAPSLHAGHLIPLLTLRRFQQA 64

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQE-IQENIEKIKGIFSSFIKYGTGKTDALM 125
           GH+PI L GG T +IGDP  RD   R + + + + +  ++I+G    F+++   +T A++
Sbjct: 65  GHRPIVLAGGATGMIGDP--RDVGERTLNTADTVADWADRIRGQLERFVEFDDSETGAIV 122

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
            +N TW   +  I+ LR++G  FSVN ML  ++VR RL+ +  +S+ EF+YM+LQA D+V
Sbjct: 123 ADNLTWTSELSAIEFLRDVGKHFSVNVMLDRDTVRRRLEGD-GISYTEFSYMLLQANDYV 181

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK-TLSGA 244
           EL + Y C LQ+GGSDQWGNII G+ L  +     + A+T+PL+T + G K GK T  G+
Sbjct: 182 ELHQRYGCTLQVGGSDQWGNIIAGVRLVRQKAGAAVHAMTTPLVTDSEGKKFGKSTGGGS 241

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKII 302
           +WL+ EMTSPY ++QY+ N  DADVV + +  T L   E+  +     +  +E  A++ +
Sbjct: 242 LWLDPEMTSPYAWYQYFINTADADVVPYLRWFTFLTAEELAELELATAERPHERAAQRRL 301

Query: 303 ATEITTMVHGREEAEKAATAAMEC-------------FDMSIHSQHMPTISISKDEVSRG 349
           A E+T +VHG     +AATAA+E               D +  +  +   ++++ +    
Sbjct: 302 ARELTNLVHG-----EAATAAVELASQALFGRGELADLDENTLAGAVREAAVAQLDPGGP 356

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
             ++ L+V  G + S   ARR +    + +NN+ ++ +    +  DF     + L  GK+
Sbjct: 357 DSIVDLLVATGLSASKGAARRTVAEGGVYVNNAKVTADDWVPQPSDFLHGRWLVLRRGKR 416

Query: 410 N 410
           N
Sbjct: 417 N 417


>gi|163942790|ref|YP_001647674.1| tyrosyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
 gi|163864987|gb|ABY46046.1| tyrosyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
          Length = 420

 Score =  256 bits (654), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 149/419 (35%), Positives = 221/419 (52%), Gaps = 21/419 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG ++Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  GH P+
Sbjct: 7   LEWRGAVNQQTDEEGLRKLVEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLAGHHPV 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+GG T  IGDPS R   R++   + +Q N++ +         +G G ++  M+NN  W
Sbjct: 67  ILIGGATGTIGDPSGRQSERQLQTLEVVQHNVDALTAQMKKLFDFG-GNSEVKMVNNYDW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
              I  I+ LR+ G  FS+N ML+ + V SRL  +  +SF EF Y ILQA DF  L    
Sbjct: 126 THKINIIEFLRDYGKNFSINSMLAKDIVASRL--DTGISFTEFTYQILQAMDFHHLYTKE 183

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLK--TPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
           D +LQ+GGSDQWGNI  G+DL  +L+    K+F LT PLL  + GTK GK+  GAIWL+ 
Sbjct: 184 DVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSAGGAIWLDP 243

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN--EAKKIIATEIT 307
           E T+P+ F+Q+W N DD DV+ + K  T L    ID +A     E +  EA+K++A E+T
Sbjct: 244 EKTTPFEFYQFWVNTDDRDVIKYLKYFTFLTKERIDELAAKVETEPHKREAQKVLAEEMT 303

Query: 308 TMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIV 357
             VHG E   +A       F   I S          + MPT   SK+  +    ++  +V
Sbjct: 304 KFVHGEEAFLQAVKITAALFSGDIKSLTADEIEQGFKEMPTFQSSKETKN----IVEWLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             G   S  +AR  + + AI +N   +++    + +++      I +  GKKN+ +  L
Sbjct: 360 DLGIEPSRRQAREDINNGAISMNGEKVTDVSRDVTVENSFDGRFIIIRKGKKNYSLVEL 418


>gi|313204305|ref|YP_004042962.1| tyrosyL-tRNA synthetase [Paludibacter propionicigenes WB4]
 gi|312443621|gb|ADQ79977.1| tyrosyl-tRNA synthetase [Paludibacter propionicigenes WB4]
          Length = 430

 Score =  256 bits (654), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 146/428 (34%), Positives = 231/428 (53%), Gaps = 22/428 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG IH +    E  +  ++ V +AYIG+D TA SLH G L  ++LL   Q  
Sbjct: 2   NFIEDLEWRGVIHTMMPGTEEQL--AKEVTSAYIGFDPTADSLHIGSLAPILLLKRFQLA 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD-ALM 125
           GHKPI+L+GG T +IGDPS + + R ++  + +++N+  I+   + F+ + T   + A M
Sbjct: 60  GHKPIALVGGATGMIGDPSGKSQERNLLNEETLEKNLAGIRKQLAKFLDFETESPNKAEM 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQAYD 183
           +NN  W+    ++  +R+IG   +VN M++ +SV+ RL  E    +SF EF Y ++Q YD
Sbjct: 120 VNNYDWMKEQTFLSFIRDIGKHITVNYMMAKDSVKKRLTGETRDGMSFTEFTYQLVQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F  L +N +C+LQMGGSDQWGNI  G +L  R  + + +ALT  L+T A G K GKT SG
Sbjct: 180 FYWLYENMNCKLQMGGSDQWGNITTGTELIRRKASGEAYALTINLITKADGGKFGKTESG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKI 301
            +WL+ E T+PY F+Q+W N  D D   + +  T +   EI+ + +   Q   + E +K 
Sbjct: 240 NVWLDPEKTTPYAFYQFWLNTADVDAEKYIRVFTFMSKEEIEELIERHRQAPHLRELQKK 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDEVS 347
           +A +IT MVH  E+   A  A+   F  +                   +P   ISK E+ 
Sbjct: 300 LAHDITIMVHSEEDYNAAVEASNILFGNATSDALKKLDENTLLAVFDGVPQFKISKKELE 359

Query: 348 RGMGLLTLIV-KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+ ++ L+  KA    S  E R+ ++S  + IN   + N+   +      +   + +  
Sbjct: 360 EGVKVIDLLTEKAAIFPSKGEMRKLVQSGGVSINKEKLDNQDEVLDGSKLLNNKYLLIQK 419

Query: 407 GKKNHIIC 414
           GKKN+ + 
Sbjct: 420 GKKNYFLL 427


>gi|229530307|ref|ZP_04419695.1| tyrosyl-tRNA synthetase [Vibrio cholerae 12129(1)]
 gi|229332080|gb|EEN97568.1| tyrosyl-tRNA synthetase [Vibrio cholerae 12129(1)]
          Length = 434

 Score =  256 bits (654), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 160/422 (37%), Positives = 231/422 (54%), Gaps = 23/422 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG I Q S P E  +         Y G+D TA SLH GHL  L++L   Q  GH+ I
Sbjct: 18  LQQRGLIAQ-STPLEALVERFTTPQVLYCGFDPTAGSLHIGHLVPLLMLKRFQNAGHQAI 76

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM-LNNET 130
           +L+GG T +IGDPSF+   R +  +Q +Q+ +  +    +  +   +    +LM +NN  
Sbjct: 77  ALIGGATGMIGDPSFKANERVLNSAQTVQQWVSDLSQQITQLMASQSENCASLMTVNNAD 136

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDFVELAK 189
           W+  I  ID  R++G  FSVN M++ ESV+ RL R +Q +SF EF+Y +LQ+YDF  L +
Sbjct: 137 WIGKINLIDFFRDVGKHFSVNTMINRESVKQRLARPDQGISFTEFSYSLLQSYDFAHLNR 196

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
            + C LQ+GG+DQWGNI+ GIDL  RL   ++  LT PL+T + GTK GKT SGA+WL  
Sbjct: 197 EFGCALQIGGNDQWGNIVSGIDLTRRLNGVEVCGLTLPLITKSDGTKFGKTESGAVWLES 256

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEIT 307
             TSPY F+Q+W N DDADV  F    T L  +EI+  R A        +A++I+A  +T
Sbjct: 257 RKTSPYRFYQFWLNSDDADVYRFLAYYTFLSTAEIEEIRQADALRAGKPQAQQILAEHVT 316

Query: 308 TMVHGRE--EAEKAATAAMECFDMSIHS---------QHMPTISISKDEVSRGMGLLTLI 356
             VHG E   A +  T A+   D+S  S           +P ++ S+ +       L L+
Sbjct: 317 RFVHGEEGLAAAQRITQALFSGDVSYLSLSELAQLELDGLPCVAASRTDSL-----LDLL 371

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           + +G A+S  +AR  L++ AI++N   +  E +      FD      L  GKK   +  L
Sbjct: 372 LSSGLASSKRQAREWLENGAIRVNGERVQQEGVLSGFALFDRY--YVLQRGKKQFALIKL 429

Query: 417 CG 418
            G
Sbjct: 430 EG 431


>gi|229199218|ref|ZP_04325896.1| Tyrosyl-tRNA synthetase [Bacillus cereus m1293]
 gi|228584235|gb|EEK42375.1| Tyrosyl-tRNA synthetase [Bacillus cereus m1293]
          Length = 419

 Score =  256 bits (653), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 150/419 (35%), Positives = 221/419 (52%), Gaps = 21/419 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I+Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  GH P+
Sbjct: 7   LEWRGAINQQTDEEGLRKLVEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLAGHHPV 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+GG T  IGDPS R   R++   + +Q N++ +         +G G ++  M+NN  W
Sbjct: 67  ILIGGATGTIGDPSGRQSERQLQTLEVVQHNVDALTAQMKKLFDFG-GNSEVKMVNNYDW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
              I  I+ LR+ G  FS+N ML+ + V SRL  +  +SF EF Y ILQA DF  L    
Sbjct: 126 THEINIIEFLRDYGKNFSINSMLAKDIVASRL--DTGISFTEFTYQILQAMDFHHLYTKE 183

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLK--TPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
           D +LQ+GGSDQWGNI  G+DL  +L+    K+F LT PLL  + GTK GK+  GA+WL+ 
Sbjct: 184 DVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSAGGAVWLDP 243

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN--EAKKIIATEIT 307
           E T+P+ F+Q+W N DD DVV + K  T L    ID +A     E +  EA+K++A E+T
Sbjct: 244 EKTTPFEFYQFWVNTDDRDVVKYLKYFTFLTKERIDELAVKVETEPHKREAQKVLAEEMT 303

Query: 308 TMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIV 357
             VHG E   +A       F   I S          + MPT   SK+  +    ++  +V
Sbjct: 304 KFVHGEEAFLQAVKITAALFSGDIKSLTADEIEQGFKEMPTFQSSKETKN----IVEWLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             G   S  +AR  + + AI +N   +++    + +++      I +  GKKN+ +  L
Sbjct: 360 DLGIEPSRRQAREDINNGAISMNGEKVTDVGTDVTVENSFDGRFIIIRKGKKNYSLVKL 418


>gi|228942237|ref|ZP_04104777.1| Tyrosyl-tRNA synthetase [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|228975167|ref|ZP_04135726.1| Tyrosyl-tRNA synthetase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228981806|ref|ZP_04142101.1| Tyrosyl-tRNA synthetase [Bacillus thuringiensis Bt407]
 gi|228777918|gb|EEM26190.1| Tyrosyl-tRNA synthetase [Bacillus thuringiensis Bt407]
 gi|228784688|gb|EEM32708.1| Tyrosyl-tRNA synthetase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228817571|gb|EEM63656.1| Tyrosyl-tRNA synthetase [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|326942891|gb|AEA18787.1| tyrosyl-tRNA synthetase [Bacillus thuringiensis serovar chinensis
           CT-43]
          Length = 419

 Score =  256 bits (653), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 148/419 (35%), Positives = 222/419 (52%), Gaps = 21/419 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG ++Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  GH P+
Sbjct: 7   LEWRGAVNQQTDEEGLRKLVEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLAGHHPV 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+GG T  IGDPS R   R++   + +Q N++ +         +G G ++  M+NN  W
Sbjct: 67  ILIGGATGTIGDPSGRQSERQLQTLEVVQHNVDALTAQMKKLFDFG-GNSEVKMVNNYDW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
              I  I+ LR+ G  FS+N ML+ + V SRL  +  +SF EF Y ILQA DF  L    
Sbjct: 126 THEINIIEFLRDYGKNFSINSMLAKDIVASRL--DTGISFTEFTYQILQAMDFHHLYTKE 183

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLK--TPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
           D +LQ+GGSDQWGNI  G+DL  +L+    K+F LT PLL  + GTK GK+  GA+WL+ 
Sbjct: 184 DVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSAGGAVWLDP 243

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN--EAKKIIATEIT 307
           E T+P+ F+Q+W N DD DV+ + K  T L    ID +A     E +  EA+K++A E+T
Sbjct: 244 EKTTPFEFYQFWVNTDDRDVIKYLKYFTFLTKERIDELAAKVETEPHKREAQKVLAEEMT 303

Query: 308 TMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIV 357
             VHG E   +A       F   I S          + MPT   SK+  +    ++  +V
Sbjct: 304 KFVHGEEALLQAEKITAALFSGDIKSLTADEIEQGFKEMPTFQSSKETKN----IVEWLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             G   S  +AR  + + AI +N   +++  + + +++      I +  GKKN+ +  L
Sbjct: 360 DLGIEPSRRQAREDINNGAISMNGEKVTDVGIDVTVENSFDGRFIIIRKGKKNYSLVKL 418


>gi|108885117|ref|NP_073125.2| tyrosyl-tRNA synthetase [Mycoplasma genitalium G37]
 gi|97537329|sp|P47693|SYY_MYCGE RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|84626163|gb|AAC72475.2| tyrosyl-tRNA synthetase [Mycoplasma genitalium G37]
 gi|166079005|gb|ABY79623.1| tyrosyl-tRNA synthetase [synthetic Mycoplasma genitalium JCVI-1.0]
          Length = 396

 Score =  256 bits (653), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 140/376 (37%), Positives = 218/376 (57%), Gaps = 16/376 (4%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           ++ L  L ER    Q +   ELD    +     Y+G+D TA+SLH G+   + +   L+ 
Sbjct: 3   NNILQFLKERELYSQANFETELDNHLKEKKNNFYVGFDPTANSLHIGNYVLIHIAKLLKD 62

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH P  ++G  T++IGDP+ R E R+++  +EI +N + IK     F+       D ++
Sbjct: 63  MGHTPHIVLGSATALIGDPTGRIELRKILEEKEIVKNTKTIKKQIKQFL------GDVII 116

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
             N+ WL  + YI+++RE+G+FFSVN+MLS ++  +R   E+ L+ +E NYMILQAYDF 
Sbjct: 117 HENKVWLEKLNYIEVIRELGAFFSVNKMLSTDAFSARW--EKGLTLMELNYMILQAYDFY 174

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L KN++  LQ+GGSDQW NI+ G +L +R     +F LT+ LL  A+G KMGKT SGA+
Sbjct: 175 YLHKNHNVTLQIGGSDQWANILAGANLIKRKNNASVFGLTANLLVKANGEKMGKTSSGAL 234

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
           WL++  TS ++F+QYW N+DD  +      LT L    ID +  L+G +I + K+++A  
Sbjct: 235 WLDENKTSVFDFYQYWINLDDQSLKKTFLMLTMLDKKVIDELCNLKGPKIKQTKQMLAFL 294

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           IT ++HG ++A++A   +   F       + P + I    V     L+  +V+  F  S 
Sbjct: 295 ITELIHGTKKAKEAQQRSELIFS------NQPDLDIKL--VKTSTNLIDYLVETKFIKSK 346

Query: 366 NEARRHLKSNAIKINN 381
           +EARR +    + INN
Sbjct: 347 SEARRLISQKGLTINN 362


>gi|119716211|ref|YP_923176.1| tyrosyl-tRNA synthetase [Nocardioides sp. JS614]
 gi|119536872|gb|ABL81489.1| tyrosyl-tRNA synthetase [Nocardioides sp. JS614]
          Length = 423

 Score =  256 bits (653), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 148/417 (35%), Positives = 228/417 (54%), Gaps = 21/417 (5%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L  RG I   ++   L    + G V  Y+G+D TA SLH G+L Q++    LQ+ G
Sbjct: 7   LLDDLEWRGLIAHSTDLDALREALAGGSVRFYVGFDPTAPSLHLGNLVQILTAKRLQEAG 66

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQE-IQENIEKIKGIFSSFIKYGTGKTDALML 126
           H P +L+GG T +IGDP  ++   R + S + ++E +E+++     F+ +  G   A M+
Sbjct: 67  HTPYALVGGATGMIGDP--KESGERTLNSLDTVKEWVERVRRQIEPFLSF-EGANAATMV 123

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W  S+  ID LR+IG  F VNRMLS + VRSRL  +  +S+ EF+Y++LQ+ DF+ 
Sbjct: 124 NNYDWTASLSTIDFLRDIGKHFPVNRMLSRDVVRSRL--DAGISYTEFSYVLLQSMDFLN 181

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L +++   LQ GGSDQWGN+  G++L  R    K  A  +PL+T A GTK GKT  GA+W
Sbjct: 182 LYRDHGVVLQFGGSDQWGNLTGGVELIRRAAGGKAHAFATPLITKADGTKYGKTEGGALW 241

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE--INEAKKIIAT 304
           L+ EM SPY F+Q+W N++D  V    +  T LP +EI+ +     ++  +   ++ +A 
Sbjct: 242 LDPEMMSPYAFYQFWLNVEDEKVGELLRVFTFLPRAEIEALEAEHAEKPFLRAGQRALAE 301

Query: 305 EITTMVHGREEAEKAATAAMECF---DMSIHS--------QHMPTISISKDEVSRGMGLL 353
            +TT+VHG EE E+   A+   F   D++  S        +   + S+  DE      ++
Sbjct: 302 HVTTLVHGAEETERIRAASAALFGGGDLTTLSAATLGAALREAGSASVDGDEDL--PTVV 359

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            L+V  G A S  +ARR +      +NN+ + +       +D      + L  GKKN
Sbjct: 360 DLLVATGLAKSKGDARRTVTEGGAYLNNARVEDPDHVPAPEDLIDGTWLVLRRGKKN 416


>gi|320096300|ref|ZP_08027871.1| tyrosine--tRNA ligase [Actinomyces sp. oral taxon 178 str. F0338]
 gi|319976766|gb|EFW08538.1| tyrosine--tRNA ligase [Actinomyces sp. oral taxon 178 str. F0338]
          Length = 420

 Score =  256 bits (653), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 152/425 (35%), Positives = 234/425 (55%), Gaps = 19/425 (4%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +D +  L  RG + Q ++   L    + G VT Y GYD TA SLH GHL QL+++  LQ 
Sbjct: 2   TDIIDELQWRGLLAQHTDLAALREHLASGPVTFYCGYDPTAPSLHHGHLVQLIVMRHLQL 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T  IGDP    E R++  ++ +Q   +K++   S F+ +  G   A M
Sbjct: 62  AGHKPLALVGGATGQIGDPRQSGE-RQLQPTEVVQGWAQKLRDQISRFLDF-EGPAAARM 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  W   +  IDLLR IG +F V  ML+ + V  R+  ++ +S+ EF+Y +LQA DF+
Sbjct: 120 VNNLDWTQQMSAIDLLRTIGKYFRVGTMLNKDIVARRIASDEGISYTEFSYQVLQANDFL 179

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           EL + Y C L+ GG+DQWGN++ G+DL  ++       +T+P++T A GTK GK+  GAI
Sbjct: 180 ELFRRYGCTLETGGNDQWGNMVGGVDLIHKVDGADAHVMTTPIITKADGTKFGKSEGGAI 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM-AKLQGKEINE-AKKIIA 303
           WL+ +M SPY F+Q+W  + D DVV F K  T L  + I+ + A++  +     A+K +A
Sbjct: 240 WLDPQMMSPYAFYQFWLQVSDEDVVRFLKIFTFLDRARIEELEAEVAARPHQRAAQKALA 299

Query: 304 TEITTMVHGREEAEK--AATAAM-------ECFDMSIHS--QHMPTISISKDEVSRGMGL 352
             +T+MVHG +E  +  AAT A+       E  + S+ +    +P  S+   E S    +
Sbjct: 300 AAVTSMVHGDQELARVQAATKALWGGGDIKELDEASLRAATADLPRASVPLGEAS----V 355

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
              +V  GF    + ARR + S  + +NN  +S+    +   D        L  G+KN  
Sbjct: 356 ADALVAVGFERGKSAARRTVASGGVSVNNVRVSDADAPLTGSDALPGSLALLRKGRKNLA 415

Query: 413 ICHLC 417
           +  L 
Sbjct: 416 VVELA 420


>gi|254557421|ref|YP_003063838.1| tyrosine--tRNA ligase [Lactobacillus plantarum JDM1]
 gi|254046348|gb|ACT63141.1| tyrosine--tRNA ligase [Lactobacillus plantarum JDM1]
          Length = 418

 Score =  256 bits (653), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 149/398 (37%), Positives = 212/398 (53%), Gaps = 30/398 (7%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I+Q ++   L  L     V+ Y G D T  S+H GHL   M+L   Q  GH P 
Sbjct: 7   LKWRGAINQQTDEAGLKELTENQSVSLYCGIDPTGDSMHIGHLIPFMILKRFQLAGHHPY 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            ++GGGT  IGDPS ++  R++    +++ N +   G+ +   K      +  ++NN  W
Sbjct: 67  VVVGGGTGAIGDPSGKNSERKLQTMDQVKHNQD---GLSAQMYKLFGHDENFSIVNNYDW 123

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L  I  +D LR+ G  FSVN ML+ E V SRL  E  +S+ EF Y ILQ+ DF+ L +  
Sbjct: 124 LSKISLLDFLRDYGKLFSVNTMLNKEVVASRL--EVGISYTEFTYQILQSVDFLHLYRAE 181

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLK--TPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
             +LQ+GG+DQWGNI  G DL  RL+    K + LT PLL  A GTK GKT  GA+WLN 
Sbjct: 182 HVQLQIGGADQWGNITAGTDLIHRLEGNDAKAYGLTIPLLLKADGTKFGKTAGGAVWLNP 241

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIATEIT 307
           E TSPY F+Q+W N DD DVV + K  T L   EIDR+A+      E  EA++ +A E+T
Sbjct: 242 ERTSPYEFYQFWINQDDRDVVKYLKYFTFLSHEEIDRLAETVKTAPEKREAQRRLAEEVT 301

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMG--------------LL 353
             VHG++   +A       F   +        S++ DE+ +G                +L
Sbjct: 302 EFVHGKQAVVEAENITKALFTGDVQ-------SLTADEIEQGFKGVPSADVSAEKQNIVL 354

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
            L+    F  S  +AR  +K+ AI+IN   +++ + +I
Sbjct: 355 WLVDATKFEPSRRQAREDIKNGAIRINGEKVTDVEAEI 392


>gi|315604494|ref|ZP_07879558.1| tyrosine--tRNA ligase [Actinomyces sp. oral taxon 180 str. F0310]
 gi|315313778|gb|EFU61831.1| tyrosine--tRNA ligase [Actinomyces sp. oral taxon 180 str. F0310]
          Length = 420

 Score =  255 bits (652), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 145/424 (34%), Positives = 233/424 (54%), Gaps = 19/424 (4%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +D L  L  RG + Q ++   L    + G VT Y GYD TA SLH GHL QL+++  LQ 
Sbjct: 2   TDILDDLQWRGLLAQHTDLEALRAHLASGPVTFYCGYDPTAPSLHHGHLVQLIVMRHLQL 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+P++L+GG T  IGDP    E R++  +  +Q   ++++   S F+ +  G   A M
Sbjct: 62  AGHRPLALVGGATGQIGDPRQSGE-RQLQPTDVVQGWADRLRAQISRFLDF-EGPAAAQM 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  W   +  IDLLR IG +F V  ML  + V  R+  ++ +S+ EF+Y +LQA DF+
Sbjct: 120 VNNLDWTEQMSAIDLLRTIGKYFRVGTMLGKDIVARRIASDEGISYTEFSYQVLQANDFL 179

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           EL +   C L+ GG+DQWGN++ G+DL  +++  +   +T+P++T A GTK GK+  GAI
Sbjct: 180 ELFRREGCTLETGGNDQWGNMVGGVDLIRKVEGAETHVMTTPIITKADGTKFGKSEGGAI 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIA 303
           WL+ EM +PY F+Q+W  + D DVV F K  T +   EI+ +A    +  ++  A+K +A
Sbjct: 240 WLDPEMMTPYAFYQFWLQVADEDVVRFLKIFTFMSREEIEALAVEVAERPHQRAAQKALA 299

Query: 304 TEITTMVHGREEAEK--AATAAM---------ECFDMSIHSQHMPTISISKDEVSRGMGL 352
             +T +VHG ++ ++  AAT A+         +   ++  +  +P  S+S  E +    +
Sbjct: 300 ASVTELVHGADQLKRVLAATQALWGGGDIRDLDAATLAAATADLPRASLSLGEAT----V 355

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           +  +V  GF      ARR + S    +NN  + +    +   D  + G   +  G+KN  
Sbjct: 356 VDALVALGFEKGKTAARRTIASGGASVNNVKVEDPDTLLNASDVLAGGLALIRKGRKNLA 415

Query: 413 ICHL 416
           +  L
Sbjct: 416 VLEL 419


>gi|262202730|ref|YP_003273938.1| tyrosyl-tRNA synthetase [Gordonia bronchialis DSM 43247]
 gi|262086077|gb|ACY22045.1| tyrosyl-tRNA synthetase [Gordonia bronchialis DSM 43247]
          Length = 437

 Score =  255 bits (652), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 147/410 (35%), Positives = 226/410 (55%), Gaps = 24/410 (5%)

Query: 2   PAFKS-DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           PA  S D +  L  RG I Q ++   L    + G  T Y G+D TA+SLHAGHL  L+ L
Sbjct: 12  PAAGSGDIVDELQWRGLIAQSTDLDALRARLAGGPTTLYAGFDPTAASLHAGHLVPLLTL 71

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQE-IQENIEKIKGIFSSFIKYGTG 119
              Q  GH+PI L GG T +IGDP  RD   R M S + + +   +I      F+     
Sbjct: 72  RRFQLAGHRPIVLAGGATGLIGDP--RDVGERTMNSADTVADWAARIDAQLRRFVTIDDS 129

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
            T A+++NN  W   +  I+ LR++G  FS+N +L  + VR RL+ +  +S+ EF+Y++L
Sbjct: 130 PTGAVLVNNMEWTRELTVIEFLRDLGKHFSMNVLLGRDLVRRRLETD-GISYTEFSYVLL 188

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK 239
           Q++DF++L + YDC LQ+GGSDQWGNI+ G+DL  R++   +   T PL+T++ G K GK
Sbjct: 189 QSHDFLQLHRRYDCALQVGGSDQWGNIVSGVDLTRRVEGATVHGFTVPLVTSSDGKKFGK 248

Query: 240 -TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEIN 296
            T  G++WL+ E+TSPY ++QY+ N  DADVV + K  T L   EID +  A  +   + 
Sbjct: 249 STGGGSLWLDPELTSPYAWYQYFVNTADADVVRYLKWFTFLGREEIDALERATEETPHLR 308

Query: 297 EAKKIIATEITTMVHGREEAEKAATAAMECF---DMSIHSQHMPTISISKDEVSRGMG-- 351
           +A+K +A E+TT++HG         A+   F   ++    +     ++ +  V+   G  
Sbjct: 309 KAQKALAAEMTTLIHGEANTAAVELASQALFGRAELDALDEQTLAAAVGETTVAEYTGEP 368

Query: 352 --LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDST 399
             ++ L+V  G + S   ARR +      +NN         +K++D D T
Sbjct: 369 PTIVRLLVDTGLSDSNKAARRAVAEGGAYVNN---------VKIEDPDWT 409


>gi|229169791|ref|ZP_04297488.1| Tyrosyl-tRNA synthetase [Bacillus cereus AH621]
 gi|228613641|gb|EEK70769.1| Tyrosyl-tRNA synthetase [Bacillus cereus AH621]
          Length = 420

 Score =  255 bits (652), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 149/419 (35%), Positives = 221/419 (52%), Gaps = 21/419 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG ++Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  GH P+
Sbjct: 7   LEWRGAVNQQTDEEGLRKLVEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLAGHHPV 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+GG T  IGDPS R   R++   + +Q N++ +         +G G ++  M+NN  W
Sbjct: 67  ILIGGATGTIGDPSGRQSERQLQTLEVVQHNVDALTAQMKKLFDFG-GNSEVKMVNNYDW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
              I  I+ LR+ G  FS+N ML+ + V SRL  +  +SF EF Y ILQA DF  L    
Sbjct: 126 THKINIIEFLRDYGKNFSINSMLAKDIVASRL--DTGISFTEFTYQILQAMDFHHLYTKE 183

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLK--TPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
           D +LQ+GGSDQWGNI  G+DL  +L+    K+F LT PLL  + GTK GK+  GAIWL+ 
Sbjct: 184 DVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSAGGAIWLDP 243

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN--EAKKIIATEIT 307
           E T+P+ F+Q+W N DD DV+ + K  T L    ID +A     E +  EA+K++A E+T
Sbjct: 244 EKTTPFEFYQFWVNTDDRDVIKYLKYFTFLTKERIDELAVKVETEPHKREAQKVLAEEMT 303

Query: 308 TMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIV 357
             VHG E   +A       F   I S          + MPT   SK+  +    ++  +V
Sbjct: 304 KFVHGEEAFLQAVKITAALFSGDIKSLTADEIEQGFKEMPTFQSSKETKN----IVEWLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             G   S  +AR  + + AI +N   +++    + +++      I +  GKKN+ +  L
Sbjct: 360 DLGIEPSRRQAREDINNGAISMNGEKVTDVSRDVTVENSFDGRFIIIRKGKKNYSLVEL 418


>gi|293376351|ref|ZP_06622588.1| tyrosine--tRNA ligase [Turicibacter sanguinis PC909]
 gi|325843430|ref|ZP_08167988.1| tyrosine--tRNA ligase [Turicibacter sp. HGF1]
 gi|292645040|gb|EFF63113.1| tyrosine--tRNA ligase [Turicibacter sanguinis PC909]
 gi|325489352|gb|EGC91726.1| tyrosine--tRNA ligase [Turicibacter sp. HGF1]
          Length = 422

 Score =  255 bits (652), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 144/397 (36%), Positives = 225/397 (56%), Gaps = 22/397 (5%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           K++FL  L  RG I+  ++   LD L  +G +T Y G+D TA SLH GHL  +++L   Q
Sbjct: 2   KNEFLKDLQWRGLINDCTDFDALDELVEKGNITLYCGFDPTADSLHIGHLLMILILKRFQ 61

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG-TGKTDA 123
             GHKP++L+GG T +IGDPS R   R     + +++    IKG  S F+ +  T    A
Sbjct: 62  LAGHKPLALVGGATGLIGDPSGRSVERPDSNLETVEKWSNSIKGQLSQFLDFNETEANGA 121

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            ++NN  W  ++  +D LR++G +F+VN +L+ + V SRL  ++ ++F EF+Y ILQ  D
Sbjct: 122 EIVNNYDWTSNVNMLDFLRDVGKYFNVNYILAKDLVCSRL--DKGMTFTEFSYTILQGMD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERL--KTPKLFALTSPLLTTASGTKMGKTL 241
           F  L +   C LQ+GGSDQWGNI  G++L  +      K   LT PL+T A GTK GKT 
Sbjct: 180 FKHLYETKKCVLQIGGSDQWGNITSGLELIRKQLGHEEKAVGLTMPLVTKADGTKFGKTA 239

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAK 299
            GA+WL+++ TSPY  +Q+  N  D DVV F K  T L   EI+ +     +   +   +
Sbjct: 240 GGAVWLDRKKTSPYELYQFLINTADEDVVKFLKYFTFLTKEEIEAVEAEFKEAPHLRHGQ 299

Query: 300 KIIATEITTMVHGREEAEKAAT----------AAMECFDMSIHSQHMPTISISKDEVSRG 349
           K++A E+ T+VHG E  E+A            A +   ++ +  + +P++ +++D     
Sbjct: 300 KVLAREVVTLVHGVEAYEQALKITEALFSGNLAGLTAEEIEVGFKDVPSVELAED----- 354

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISN 386
           + L+  +V A  A+S  E+R  + +N+I IN   ++N
Sbjct: 355 LNLVDALVFAKAASSKRESREFINNNSILINGEKVNN 391


>gi|30265113|ref|NP_847490.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. Ames]
 gi|47530623|ref|YP_021972.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49187924|ref|YP_031177.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|65317058|ref|ZP_00390017.1| COG0162: Tyrosyl-tRNA synthetase [Bacillus anthracis str. A2012]
 gi|165870040|ref|ZP_02214697.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|167636569|ref|ZP_02394864.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. A0442]
 gi|167641773|ref|ZP_02400015.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. A0193]
 gi|170689360|ref|ZP_02880553.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. A0465]
 gi|170709106|ref|ZP_02899534.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. A0389]
 gi|177655386|ref|ZP_02936884.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. A0174]
 gi|190569231|ref|ZP_03022127.1| tyrosyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I]
 gi|196032753|ref|ZP_03100166.1| tyrosyl-tRNA synthetase [Bacillus cereus W]
 gi|218906267|ref|YP_002454101.1| tyrosyl-tRNA synthetase [Bacillus cereus AH820]
 gi|227817844|ref|YP_002817853.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. CDC 684]
 gi|228917703|ref|ZP_04081244.1| Tyrosyl-tRNA synthetase [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
 gi|228930098|ref|ZP_04093108.1| Tyrosyl-tRNA synthetase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228936350|ref|ZP_04099148.1| Tyrosyl-tRNA synthetase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228948798|ref|ZP_04111074.1| Tyrosyl-tRNA synthetase [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|229124608|ref|ZP_04253793.1| Tyrosyl-tRNA synthetase [Bacillus cereus 95/8201]
 gi|229602713|ref|YP_002869306.1| tyrosine--tRNA ligase [Bacillus anthracis str. A0248]
 gi|254686485|ref|ZP_05150344.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. CNEVA-9066]
 gi|254724484|ref|ZP_05186268.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. A1055]
 gi|254735692|ref|ZP_05193399.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. Western North
           America USA6153]
 gi|254744222|ref|ZP_05201902.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. Kruger B]
 gi|254750984|ref|ZP_05203023.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. Vollum]
 gi|254756974|ref|ZP_05209002.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. Australia 94]
 gi|81583842|sp|Q81XC6|SYY2_BACAN RecName: Full=Tyrosyl-tRNA synthetase 2; AltName:
           Full=Tyrosine--tRNA ligase 2; Short=TyrRS 2
 gi|30259790|gb|AAP28976.1| tyrosine--tRNA ligase [Bacillus anthracis str. Ames]
 gi|47505771|gb|AAT34447.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49181851|gb|AAT57227.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|164714363|gb|EDR19883.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|167510256|gb|EDR85660.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. A0193]
 gi|167528042|gb|EDR90845.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. A0442]
 gi|170126008|gb|EDS94907.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. A0389]
 gi|170666656|gb|EDT17426.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. A0465]
 gi|172080137|gb|EDT65231.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. A0174]
 gi|190559671|gb|EDV13660.1| tyrosyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I]
 gi|195994182|gb|EDX58137.1| tyrosyl-tRNA synthetase [Bacillus cereus W]
 gi|218538895|gb|ACK91293.1| tyrosyl-tRNA synthetase [Bacillus cereus AH820]
 gi|227006923|gb|ACP16666.1| tyrosine--tRNA ligase [Bacillus anthracis str. CDC 684]
 gi|228658948|gb|EEL14603.1| Tyrosyl-tRNA synthetase [Bacillus cereus 95/8201]
 gi|228810855|gb|EEM57200.1| Tyrosyl-tRNA synthetase [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|228823182|gb|EEM69016.1| Tyrosyl-tRNA synthetase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228829597|gb|EEM75224.1| Tyrosyl-tRNA synthetase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228841940|gb|EEM87046.1| Tyrosyl-tRNA synthetase [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
 gi|229267121|gb|ACQ48758.1| tyrosine--tRNA ligase [Bacillus anthracis str. A0248]
          Length = 419

 Score =  255 bits (652), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 149/419 (35%), Positives = 221/419 (52%), Gaps = 21/419 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG ++Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  GH P+
Sbjct: 7   LEWRGAVNQQTDEEGLRKLVEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLAGHHPV 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+GG T  IGDPS R   R++   + +Q N++ +         +G G ++  M+NN  W
Sbjct: 67  ILIGGATGTIGDPSGRQSERQLQTLEVVQHNVDALTAQMKKLFDFG-GNSEVKMVNNYDW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
              I  I+ LR+ G  FS+N ML+ + V SRL  +  +SF EF Y ILQA DF  L    
Sbjct: 126 THEINIIEFLRDYGKNFSINSMLAKDIVASRL--DTGISFTEFTYQILQAMDFHHLYTKE 183

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLK--TPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
           D +LQ+GGSDQWGNI  G+DL  +L+    K+F LT PLL  + GTK GK+  GA+WL+ 
Sbjct: 184 DVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSAGGAVWLDP 243

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN--EAKKIIATEIT 307
           E T+P+ F+Q+W N DD DVV + K  T L    ID +A     E +  EA+K++A E+T
Sbjct: 244 EKTTPFEFYQFWVNTDDRDVVKYLKYFTFLTKERIDELAVKVETEPHKREAQKVLAEEMT 303

Query: 308 TMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIV 357
             VHG E   +A       F   I S          + MPT   SK+  +    ++  +V
Sbjct: 304 KFVHGEEALLQAVKITAALFSGDIKSLTADEIEQGFKEMPTFQSSKETKN----IVEWLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             G   S  +AR  + + AI +N   +++    + +++      I +  GKKN+ +  L
Sbjct: 360 DLGIEPSRRQAREDINNGAISMNGEKVTDVGTDVTVENSFDGRFIIIRKGKKNYSLVKL 418


>gi|229072555|ref|ZP_04205757.1| Tyrosyl-tRNA synthetase [Bacillus cereus F65185]
 gi|228710531|gb|EEL62504.1| Tyrosyl-tRNA synthetase [Bacillus cereus F65185]
          Length = 419

 Score =  255 bits (652), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 148/419 (35%), Positives = 221/419 (52%), Gaps = 21/419 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG ++Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  GH P+
Sbjct: 7   LEWRGAVNQQTDEEGLRKLVEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLAGHHPV 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+GG T  IGDPS R   R++   + +Q N++ +         +G G ++  M+NN  W
Sbjct: 67  ILIGGATGTIGDPSGRQSERQLQTLEVVQHNVDALTAQMKKLFDFG-GNSEVKMVNNYDW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
              I  I+ LR+ G  FS+N ML+ + V SRL  +  +SF EF Y ILQA DF  L    
Sbjct: 126 THEINIIEFLRDYGKNFSINSMLAKDIVASRL--DTGISFTEFTYQILQAMDFHHLYTKE 183

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLK--TPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
           D +LQ+GGSDQWGNI  G+DL  +L+    K+F LT PLL  + GTK GK+  GA+WL+ 
Sbjct: 184 DVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSAGGAVWLDP 243

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN--EAKKIIATEIT 307
           E T+P+ F+Q+W N DD DV+ + K  T L    ID +A     E +  EA+K++A E+T
Sbjct: 244 EKTTPFEFYQFWVNTDDRDVIKYLKYFTFLTKERIDELAAKVETEPHKREAQKVLAEEMT 303

Query: 308 TMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIV 357
             VHG E   +A       F   I S          + MPT   SK+  +    ++  +V
Sbjct: 304 KFVHGEEAFLQAEKITAALFSGDIKSLTADEIEQGFKEMPTFQASKETKN----IVEWLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             G   S  +AR  + + AI +N   +++    + +++      I +  GKKN+ +  L
Sbjct: 360 DLGIEPSRRQAREDINNGAISMNGEKVTDVGTDVTVENSFDGRFIIIRKGKKNYSLVKL 418


>gi|293189895|ref|ZP_06608601.1| tyrosine--tRNA ligase [Actinomyces odontolyticus F0309]
 gi|292821198|gb|EFF80144.1| tyrosine--tRNA ligase [Actinomyces odontolyticus F0309]
          Length = 420

 Score =  255 bits (652), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 146/422 (34%), Positives = 233/422 (55%), Gaps = 13/422 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +D L  L  RG + Q ++   L    + G VT Y GYD TA SLH GHL QL+++  LQ 
Sbjct: 2   TDILDELQWRGLLAQHTDLEALREHLNAGPVTFYCGYDPTAPSLHHGHLVQLIVMRHLQL 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN-IEKIKGIFSSFIKYGTGKTDAL 124
            GH+P++L+GG T  IGDP  R    R ++S E+ +   +++    S F+ +  G   A 
Sbjct: 62  AGHRPLALVGGATGQIGDP--RQSGERQLQSTEVVKGWADRLHSQISKFLDF-EGPAAAT 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M+NN  W   +  ID+LR IG +F V  ML+ + V  R+  ++ +S+ EF+Y +LQA DF
Sbjct: 119 MVNNLDWTQEMSAIDMLRTIGKYFRVGTMLNKDIVARRIASDEGISYTEFSYQVLQANDF 178

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL +   C L+ GG+DQWGN++ G+DL  +++      +T+P++T A GTK GK+  GA
Sbjct: 179 LELYRRNGCTLETGGNDQWGNMVGGVDLIRKVEGVDTHVMTTPIITKADGTKFGKSEGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKII 302
           IWL+ EM +PY F+Q+W  + D DVV F K  T     EI+ +A    +  ++  A+K +
Sbjct: 239 IWLDPEMMTPYAFYQFWLQVADDDVVRFLKIFTFKSREEIEALAVEVAERPHQRAAQKAL 298

Query: 303 ATEITTMVHGREEAEK--AATAAM----ECFDMSIHSQHMPTISISKDEVSRGMGLLT-L 355
           A  +T +VHG ++ E+  AAT A+    +  D+   +    T  + +  ++ G   +   
Sbjct: 299 AASVTELVHGADQLERVLAATDALWGGGDIRDLDEATLVAATADLPRASLTIGESTVADA 358

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +V  GF      ARR + S    INN  + + +  ++ +D  + G   +  G+KN  +  
Sbjct: 359 LVALGFEKGKTAARRTISSGGASINNVKVEDPEAVLRDEDVVAGGLALIRKGRKNLAVLE 418

Query: 416 LC 417
           L 
Sbjct: 419 LS 420


>gi|315503297|ref|YP_004082184.1| tyrosyl-tRNA synthetase [Micromonospora sp. L5]
 gi|315409916|gb|ADU08033.1| tyrosyl-tRNA synthetase [Micromonospora sp. L5]
          Length = 429

 Score =  255 bits (652), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 149/430 (34%), Positives = 226/430 (52%), Gaps = 20/430 (4%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           +P  +      L  RG I   +   EL  L   G  T Y+G+D TA SLH G+L Q+++ 
Sbjct: 8   LPQGRDSLTDDLLWRGLIQDSTGLDELRELLDGGSTTFYVGFDPTAPSLHIGNLMQVVMA 67

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN-IEKIKGIFSSFIKYGTG 119
             LQ+ GH+P+ L+GG T  IGDP  ++ + R +   E+    +E+I+   S F+ Y +G
Sbjct: 68  RRLQQGGHRPLLLVGGATGQIGDP--KESAERTLNPPEVIAGWVERIREQLSPFVTY-SG 124

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
           +  A ++NN  W   +  ++ LR++G  F VN+ML+ E V++RL  E  +S+ EF+Y +L
Sbjct: 125 ENAAQLVNNLDWTGEMSVVEFLRDVGKHFPVNKMLAREVVKARL--ETGISYTEFSYQLL 182

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK 239
           QA D+ EL + + CRLQ GGSDQWGNI  G+D   R     + A T+PL+T A GTK GK
Sbjct: 183 QANDYFELHRRHGCRLQYGGSDQWGNITAGVDYIRRRGAGPVEAFTTPLVTKADGTKFGK 242

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT--TLPMSEIDRMAKLQGKEINE 297
           + +G IWL+ +MTSPY F+Q+W N DD DV  + +  +  +    E    A  +  +   
Sbjct: 243 SETGTIWLDPQMTSPYAFYQFWVNADDRDVSRYLRYFSFRSREELEELEKATAERPQARL 302

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI---------SISKDEVSR 348
           A++ +A E+TT+VHG  E  +A  A+   F      +  P            +  DE+  
Sbjct: 303 AQRALAEELTTLVHGEREMAQAVAASQALFGRGSLDELAPETLRAALTEAGLVHLDELPD 362

Query: 349 GMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGK 408
             GLL    ++G   S  EARR +      +NN+ IS     +   D      + L  GK
Sbjct: 363 VAGLLK---ESGLVPSMKEARRVIAEGGAYVNNTRISEVDATVSADDLLHGRYLVLRRGK 419

Query: 409 KNHIICHLCG 418
           ++     L G
Sbjct: 420 RSFAGVELRG 429


>gi|118480150|ref|YP_897301.1| tyrosyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
 gi|196047556|ref|ZP_03114765.1| tyrosyl-tRNA synthetase [Bacillus cereus 03BB108]
 gi|222098519|ref|YP_002532577.1| tyrosyl-tRNA synthetase [Bacillus cereus Q1]
 gi|225867053|ref|YP_002752431.1| tyrosyl-tRNA synthetase [Bacillus cereus 03BB102]
 gi|229187314|ref|ZP_04314458.1| Tyrosyl-tRNA synthetase [Bacillus cereus BGSC 6E1]
 gi|118419375|gb|ABK87794.1| tyrosyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
 gi|196021590|gb|EDX60288.1| tyrosyl-tRNA synthetase [Bacillus cereus 03BB108]
 gi|221242578|gb|ACM15288.1| tyrosyl-trna synthetase [Bacillus cereus Q1]
 gi|225785692|gb|ACO25909.1| tyrosine--tRNA ligase [Bacillus cereus 03BB102]
 gi|228596165|gb|EEK53841.1| Tyrosyl-tRNA synthetase [Bacillus cereus BGSC 6E1]
          Length = 419

 Score =  255 bits (652), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 149/419 (35%), Positives = 221/419 (52%), Gaps = 21/419 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG ++Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  GH P+
Sbjct: 7   LEWRGAVNQQTDEEGLRKLVEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLAGHHPV 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+GG T  IGDPS R   R++   + +Q N++ +         +G G ++  M+NN  W
Sbjct: 67  ILIGGATGTIGDPSGRQSERQLQTLEVVQHNVDALTAQMKKLFDFG-GNSEVKMVNNYDW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
              I  I+ LR+ G  FS+N ML+ + V SRL  +  +SF EF Y ILQA DF  L    
Sbjct: 126 THEINIIEFLRDYGKNFSINSMLAKDIVASRL--DTGISFTEFTYQILQAMDFHHLYTKE 183

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLK--TPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
           D +LQ+GGSDQWGNI  G+DL  +L+    K+F LT PLL  + GTK GK+  GA+WL+ 
Sbjct: 184 DVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSAGGAVWLDP 243

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN--EAKKIIATEIT 307
           E T+P+ F+Q+W N DD DVV + K  T L    ID +A     E +  EA+K++A E+T
Sbjct: 244 EKTTPFEFYQFWVNTDDRDVVKYLKYFTFLTKERIDELAVKVETEPHKREAQKVLAEEMT 303

Query: 308 TMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIV 357
             VHG E   +A       F   I S          + MPT   SK+  +    ++  +V
Sbjct: 304 KFVHGEEAFLQAVKITAALFSGDIKSLTADEIEQGFKEMPTFQSSKETKN----IVEWLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             G   S  +AR  + + AI +N   +++    + +++      I +  GKKN+ +  L
Sbjct: 360 DLGIEPSRRQAREDINNGAISMNGEKVTDVGTDVTVENSFDGRFIIIRKGKKNYSLVKL 418


>gi|228988321|ref|ZP_04148414.1| Tyrosyl-tRNA synthetase [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|229049757|ref|ZP_04194314.1| Tyrosyl-tRNA synthetase [Bacillus cereus AH676]
 gi|229147620|ref|ZP_04275964.1| Tyrosyl-tRNA synthetase [Bacillus cereus BDRD-ST24]
 gi|229158672|ref|ZP_04286730.1| Tyrosyl-tRNA synthetase [Bacillus cereus ATCC 4342]
 gi|228624656|gb|EEK81425.1| Tyrosyl-tRNA synthetase [Bacillus cereus ATCC 4342]
 gi|228635829|gb|EEK92315.1| Tyrosyl-tRNA synthetase [Bacillus cereus BDRD-ST24]
 gi|228722670|gb|EEL74058.1| Tyrosyl-tRNA synthetase [Bacillus cereus AH676]
 gi|228771386|gb|EEM19859.1| Tyrosyl-tRNA synthetase [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
          Length = 420

 Score =  255 bits (652), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 149/419 (35%), Positives = 221/419 (52%), Gaps = 21/419 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG ++Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  GH P+
Sbjct: 7   LEWRGAVNQQTDEEGLRKLVEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLAGHHPV 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+GG T  IGDPS R   R++   + +Q N++ +         +G G ++  M+NN  W
Sbjct: 67  ILIGGATGTIGDPSGRQSERQLQTLEVVQHNVDALTAQMKKLFDFG-GNSEVKMVNNYDW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
              I  I+ LR+ G  FS+N ML+ + V SRL  +  +SF EF Y ILQA DF  L    
Sbjct: 126 THEINIIEFLRDYGKNFSINSMLAKDIVASRL--DTGISFTEFTYQILQAMDFHHLYTKE 183

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLK--TPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
           D +LQ+GGSDQWGNI  G+DL  +L+    K+F LT PLL  + GTK GK+  GA+WL+ 
Sbjct: 184 DVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSAGGAVWLDP 243

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN--EAKKIIATEIT 307
           E T+P+ F+Q+W N DD DVV + K  T L    ID +A     E +  EA+K++A E+T
Sbjct: 244 EKTTPFEFYQFWVNTDDRDVVKYLKYFTFLTKERIDELAVKVETEPHKREAQKVLAEEMT 303

Query: 308 TMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIV 357
             VHG E   +A       F   I S          + MPT   SK+  +    ++  +V
Sbjct: 304 KFVHGEEAFLQAVKITAALFSGDIKSLTADEIEQGFKEMPTFQSSKETKN----IVEWLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             G   S  +AR  + + AI +N   +++    + +++      I +  GKKN+ +  L
Sbjct: 360 DLGIEPSRRQAREDINNGAISMNGEKVTDVGTDVTVENSFDGRFIIIRKGKKNYSLVKL 418


>gi|301056559|ref|YP_003794770.1| tyrosyl-tRNA synthetase [Bacillus anthracis CI]
 gi|300378728|gb|ADK07632.1| tyrosyl-tRNA synthetase [Bacillus cereus biovar anthracis str. CI]
          Length = 419

 Score =  255 bits (652), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 149/419 (35%), Positives = 221/419 (52%), Gaps = 21/419 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG ++Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  GH P+
Sbjct: 7   LEWRGAVNQQTDEEGLRKLVEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLAGHHPV 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+GG T  IGDPS R   R++   + +Q N++ +         +G G ++  M+NN  W
Sbjct: 67  ILIGGATGTIGDPSGRQSERQLQTLEVVQHNVDALTAQMKKLFDFG-GNSEVKMVNNYDW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
              I  I+ LR+ G  FS+N ML+ + V SRL  +  +SF EF Y ILQA DF  L    
Sbjct: 126 THEINIIEFLRDYGKNFSINSMLAKDIVASRL--DTGISFTEFTYQILQAMDFHHLYTKE 183

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLK--TPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
           D +LQ+GGSDQWGNI  G+DL  +L+    K+F LT PLL  + GTK GK+  GA+WL+ 
Sbjct: 184 DVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSAGGAVWLDP 243

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN--EAKKIIATEIT 307
           E T+P+ F+Q+W N DD DVV + K  T L    ID +A     E +  EA+K++A E+T
Sbjct: 244 EKTTPFEFYQFWVNTDDRDVVKYLKYFTFLTKERIDELAVKVETEPHKREAQKVLAEEMT 303

Query: 308 TMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIV 357
             VHG E   +A       F   I S          + MPT   SK+  +    ++  +V
Sbjct: 304 KFVHGEEALLQAVKITTALFSGDIKSLTADEIEQGFKEMPTFQSSKETKN----IVEWLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             G   S  +AR  + + AI +N   +++    + +++      I +  GKKN+ +  L
Sbjct: 360 DLGIEPSRRQAREDINNGAISMNGEKVTDVGTDVTVENSFDGRFIIIRKGKKNYSLVKL 418


>gi|42784257|ref|NP_981504.1| tyrosyl-tRNA synthetase [Bacillus cereus ATCC 10987]
 gi|81408561|sp|Q72Y10|SYY2_BACC1 RecName: Full=Tyrosyl-tRNA synthetase 2; AltName:
           Full=Tyrosine--tRNA ligase 2; Short=TyrRS 2
 gi|42740188|gb|AAS44112.1| tyrosyl-tRNA synthetase [Bacillus cereus ATCC 10987]
          Length = 419

 Score =  255 bits (652), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 150/419 (35%), Positives = 221/419 (52%), Gaps = 21/419 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I+Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  GH P+
Sbjct: 7   LEWRGAINQQTDEEGLRKLVEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLAGHHPV 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+GG T  IGDPS R   R++   + +Q N++ +         +G G ++  M+NN  W
Sbjct: 67  ILIGGATGTIGDPSGRQSERQLQTLEVVQHNVDALTAQMKKLFDFG-GNSEVKMVNNYDW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
              I  I+ LR+ G  FS+N ML+ + V SRL  +  +SF EF Y ILQA DF  L    
Sbjct: 126 THEINIIEFLRDYGKNFSINSMLAKDIVASRL--DTGISFTEFTYQILQAMDFHHLYTKE 183

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLK--TPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
           D +LQ+GGSDQWGNI  G+DL  +L+    K+F LT PLL  + GTK GK+  GA+WL+ 
Sbjct: 184 DVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSAGGAVWLDP 243

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN--EAKKIIATEIT 307
           E T+P+ F+Q+W N DD DVV + K  T L    ID +A     E +  EA+K++A E+T
Sbjct: 244 EKTTPFEFYQFWVNTDDRDVVKYLKYFTFLTKERIDELAVKVETEPHKREAQKVLAEEMT 303

Query: 308 TMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIV 357
             VHG E   +A       F   I S          + MPT   SK+  +    ++  +V
Sbjct: 304 KFVHGEEALLQAVKITEALFSGDIKSLTADEIEQGFKEMPTFQSSKETKN----IVEWLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             G   S  +AR  + + AI +N   +++    + +++      I +  GKKN+ +  L
Sbjct: 360 DLGIEPSRRQAREDINNGAISMNGEKVTDVGTDVTVENSFDGRFIIIRKGKKNYSLVKL 418


>gi|206976616|ref|ZP_03237521.1| tyrosyl-tRNA synthetase [Bacillus cereus H3081.97]
 gi|217962550|ref|YP_002341122.1| tyrosyl-tRNA synthetase [Bacillus cereus AH187]
 gi|229141803|ref|ZP_04270331.1| Tyrosyl-tRNA synthetase [Bacillus cereus BDRD-ST26]
 gi|206745102|gb|EDZ56504.1| tyrosyl-tRNA synthetase [Bacillus cereus H3081.97]
 gi|217068299|gb|ACJ82549.1| tyrosyl-tRNA synthetase [Bacillus cereus AH187]
 gi|228641639|gb|EEK97942.1| Tyrosyl-tRNA synthetase [Bacillus cereus BDRD-ST26]
          Length = 419

 Score =  255 bits (652), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 150/419 (35%), Positives = 221/419 (52%), Gaps = 21/419 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I+Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  GH P+
Sbjct: 7   LEWRGAINQQTDEEGLRKLVEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLAGHHPV 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+GG T  IGDPS R   R++   + +Q N++ +         +G G ++  M+NN  W
Sbjct: 67  ILIGGATGTIGDPSGRQSERQLQTLEVVQHNVDALTAQMKKLFDFG-GNSEVKMVNNYDW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
              I  I+ LR+ G  FS+N ML+ + V SRL  +  +SF EF Y ILQA DF  L    
Sbjct: 126 THEINIIEFLRDYGKNFSINSMLAKDIVASRL--DTGISFTEFTYQILQAMDFHHLYTKE 183

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLK--TPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
           D +LQ+GGSDQWGNI  G+DL  +L+    K+F LT PLL  + GTK GK+  GA+WL+ 
Sbjct: 184 DVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSAGGAVWLDP 243

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN--EAKKIIATEIT 307
           E T+P+ F+Q+W N DD DVV + K  T L    ID +A     E +  EA+K++A E+T
Sbjct: 244 EKTTPFEFYQFWVNTDDRDVVKYLKYFTFLTKERIDELAVKVETEPHKREAQKVLAEEMT 303

Query: 308 TMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIV 357
             VHG E   +A       F   I S          + MPT   SK+  +    ++  +V
Sbjct: 304 KFVHGEEALLQAVKITGALFSGDIKSLTADEIEQGFKEMPTFQSSKETKN----IVEWLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             G   S  +AR  + + AI +N   +++    + +++      I +  GKKN+ +  L
Sbjct: 360 DLGIEPSRRQAREDINNGAISMNGEKVTDVGTDVTVENSFDGRFIIIRKGKKNYSLVKL 418


>gi|160884937|ref|ZP_02065940.1| hypothetical protein BACOVA_02927 [Bacteroides ovatus ATCC 8483]
 gi|293368634|ref|ZP_06615241.1| tyrosine--tRNA ligase [Bacteroides ovatus SD CMC 3f]
 gi|156109972|gb|EDO11717.1| hypothetical protein BACOVA_02927 [Bacteroides ovatus ATCC 8483]
 gi|292636276|gb|EFF54761.1| tyrosine--tRNA ligase [Bacteroides ovatus SD CMC 3f]
          Length = 430

 Score =  255 bits (652), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 147/427 (34%), Positives = 227/427 (53%), Gaps = 22/427 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG +  I    E   L S+  VTAY+G D TA SLH GHL  +M+L   Q+ 
Sbjct: 2   NFVEELRWRGMLQDIMPGTEE--LLSKEQVTAYLGIDPTADSLHIGHLCGVMILRHFQRC 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD-ALM 125
           GHKP++L+GG T +IGDPS +   R ++  + ++ N   IK   + F+ + +   + A +
Sbjct: 60  GHKPLALIGGATGMIGDPSGKSAERNLLDEETLRHNQACIKNQLAKFLDFESDVPNRAEL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQAYD 183
           +NN  W+    ++D +RE+G   +VN M++ +SV+ RL  E    LSF EF Y +LQ YD
Sbjct: 120 VNNYDWMKDFTFLDFVREVGKHITVNYMMAKDSVKRRLNGEARDGLSFTEFTYQLLQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ L +   C+LQMGGSDQWGNI  G +L  R    ++FALT PL+T A G K GKT SG
Sbjct: 180 FLHLYETKGCKLQMGGSDQWGNITTGAELIRRTNGGEVFALTCPLITKADGGKFGKTESG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINEAKKI 301
            IWL+   TSPY F+Q+W N+ D+D   + K  T++   EI+ +     K   +   +K 
Sbjct: 240 NIWLDPRYTSPYKFYQFWLNVSDSDAERYIKIFTSIEKEEIEALIAEHQKAPHLRLLQKR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDEVS 347
           +A E+T MVH  ++   A  A+   F  +                 + +P   IS+D ++
Sbjct: 300 LAKEVTVMVHSEDDYNAAVDASNILFGNATSEALRKLDEDTLLAVFEGVPQFEISRDVLA 359

Query: 348 RGMGLLTLIV-KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+  + L V  A    S  E R+ ++   + +N   ++     +   D      + +  
Sbjct: 360 EGVKAVDLFVDNAAVFASKGEMRKLVQGGGVSLNKEKLAAFDQVVTTADLLDEKYLLVQR 419

Query: 407 GKKNHII 413
           GKKN+ +
Sbjct: 420 GKKNYYL 426


>gi|323699892|ref|ZP_08111804.1| tyrosyl-tRNA synthetase [Desulfovibrio sp. ND132]
 gi|323459824|gb|EGB15689.1| tyrosyl-tRNA synthetase [Desulfovibrio desulfuricans ND132]
          Length = 424

 Score =  255 bits (652), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 145/387 (37%), Positives = 215/387 (55%), Gaps = 12/387 (3%)

Query: 39  YIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQE 98
           Y G+D TA SLH G+L  L  L  +Q+ G +PI L+GG T +IGDPS +D  R+++ +  
Sbjct: 33  YAGFDPTAESLHVGNLLVLTTLVRMQRCGLRPIFLLGGATGMIGDPSGKDVERQLIDTTT 92

Query: 99  IQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
           +    E I G   +F++  TG T  ++ NN  W   I  ++ LR++G  FSVN ML+ ES
Sbjct: 93  VAAQAEMIGGQIEAFVRRNTG-TAPVLRNNYHWFKDINTMEFLRDVGKHFSVNAMLNKES 151

Query: 159 VRSRLKRE-QSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK 217
           VR R+ RE + +S+ EF+YM+LQ++DF+ L +   CR+Q+GGSDQWGNI  GIDL  R  
Sbjct: 152 VRGRIDREGEGISYTEFSYMLLQSFDFLHLFREEGCRMQIGGSDQWGNITSGIDLIRRAA 211

Query: 218 TPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT 277
             + F +T PLLTTASG K GK+   A++LN E T  Y+F Q+W N +D D + F K  T
Sbjct: 212 GGRAFGITLPLLTTASGRKFGKSEGNAVFLNAEKTPVYHFHQFWLNTEDRDAIRFLKLFT 271

Query: 278 TLPMSEIDRM--AKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECF-DMSIHSQ 334
            L  + I  +  A  +   + EA++ +A E+T MVHGR   +    AA   F D  + + 
Sbjct: 272 FLDRTVIAELEAAVEERPHLREAQRRLADEVTCMVHGRTALDAVVGAAQALFGDGDLRAV 331

Query: 335 HMPTIS---ISKDEVSRGMG----LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNE 387
            M  +     +   +  G G    L +L+V  G A S  +ARR  +   + +NN  + + 
Sbjct: 332 DMAALRGAVSAAPSLVLGHGVPTDLCSLLVGLGMAQSRGQARRDAQGGGVYVNNRRVRDA 391

Query: 388 KLQIKLQDFDSTGNIKLSFGKKNHIIC 414
                  DF     + +  G+K H + 
Sbjct: 392 AFVPTDADFLDGEMLIVRKGRKIHGVV 418


>gi|313608546|gb|EFR84432.1| tyrosyl-tRNA synthetase [Listeria monocytogenes FSL F2-208]
          Length = 387

 Score =  255 bits (652), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 145/359 (40%), Positives = 198/359 (55%), Gaps = 27/359 (7%)

Query: 39  YIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQE 98
           Y G D +  S+H GHL   M+L   Q  GH+PI L+GG T  IGDPS + E R++   ++
Sbjct: 2   YCGIDPSGDSMHIGHLIPFMILRRFQNAGHRPIILVGGATGTIGDPSGKKEERKLQSMEQ 61

Query: 99  IQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
           I +N+E ++        +  G + A M+NN  W   +  +D LR+ G  F+VN MLS + 
Sbjct: 62  ISKNVESLRVQLGKIFDF-EGDSAASMVNNYDWTKDVSILDFLRDYGKEFNVNTMLSKDI 120

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL--GERL 216
           V SRL  E  +SF EF Y ILQA DF  L +  DCRLQ+GGSDQWGNI  G+DL   ++ 
Sbjct: 121 VASRL--EVGISFTEFAYQILQAMDFNHLYEFNDCRLQIGGSDQWGNITAGLDLIRKKQG 178

Query: 217 KTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRL 276
           +  K F LT PLLT A GTK GK+  GAIWLN E T+PY F+Q+W N DD DVV + K  
Sbjct: 179 ENAKAFGLTIPLLTKADGTKFGKSEGGAIWLNPEKTTPYEFYQFWINTDDRDVVKYLKYF 238

Query: 277 TTLPMSEIDRMAKLQGKE--INEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQ 334
           T L  +EID +AK    E  +  A+K +A E+T  VH  E  E+A   +   F   +   
Sbjct: 239 TFLTEAEIDELAKQVETEPHLRAAQKTLAAEMTKFVHSEEALEQALKISKALFSGDVK-- 296

Query: 335 HMPTISISKDEVSRGM-------------GLLTLIVKAGFATSTNEARRHLKSNAIKIN 380
                +++ DE+ +G               L+  +V  G   S  +AR  + + AI IN
Sbjct: 297 -----ALTADEIEQGFKDVPTFVAEDSEANLVDWLVTLGIEPSKRQAREDVGNGAIYIN 350


>gi|212550781|ref|YP_002309098.1| tyrosyl-tRNA synthetase [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
 gi|212549019|dbj|BAG83687.1| tyrosyl-tRNA synthetase [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
          Length = 434

 Score =  255 bits (652), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 141/405 (34%), Positives = 225/405 (55%), Gaps = 27/405 (6%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG IH I+   E  +   + +  AY+G D TA SLH GHL  +M+L   Q+ 
Sbjct: 4   NFIEELRWRGMIHNITPGTEEQL--EKEMTVAYMGIDPTADSLHVGHLVGVMMLKHFQQA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD-ALM 125
           GH PI L+GG T +IGDPS + + R ++  + +++N   I+   +  + + +  ++ A++
Sbjct: 62  GHCPIVLIGGATGMIGDPSMKSQERNLLNEETLRKNQNGIRIQLAKLLDFDSNISNIAIL 121

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ--SLSFLEFNYMILQAYD 183
           +NN  W+    +++ +R+IG + +VN M+S +SVR RL  +    +SF EF+Y + Q YD
Sbjct: 122 VNNYDWIRDYSFLNFIRDIGKYITVNYMMSKDSVRKRLAADAKVGMSFTEFSYQLFQGYD 181

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           ++ L +NY+CRLQMGG+DQWGNI  GI+L  +    K+FALT PL+T   G+K GKT +G
Sbjct: 182 YLFLYENYNCRLQMGGADQWGNITTGIELIRKKVGGKVFALTCPLITKTDGSKFGKTEAG 241

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKKI 301
            IWL+K  TSPY F+Q+W N+ D D   + +  T L   EI+ +         +   ++ 
Sbjct: 242 NIWLDKRYTSPYKFYQFWLNVSDIDAEKYIRIFTVLSKKEIENLISKHKLAPHLRSLQRS 301

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDEVS 347
           +A E+T MVH +E+ E A   +   F  +  S                +P   I K+ +S
Sbjct: 302 LAKEVTIMVHSQEDYEMAVKTSTILFGNATSSFLKQLDKDTLENIFVGIPQFEIFKESLS 361

Query: 348 RGMGLLTLIV-KAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
            G+  + L+V      +S  E R+ +++  + IN      EKL I
Sbjct: 362 LGIKAVDLLVDNIHIFSSRGEMRKLVQNGGVSIN-----KEKLPI 401


>gi|237716892|ref|ZP_04547373.1| tyrosyl-tRNA synthetase [Bacteroides sp. D1]
 gi|237720657|ref|ZP_04551138.1| tyrosyl-tRNA synthetase [Bacteroides sp. 2_2_4]
 gi|262405660|ref|ZP_06082210.1| tyrosyl-tRNA synthetase [Bacteroides sp. 2_1_22]
 gi|294644399|ref|ZP_06722162.1| tyrosine--tRNA ligase [Bacteroides ovatus SD CC 2a]
 gi|294810392|ref|ZP_06769049.1| tyrosine--tRNA ligase [Bacteroides xylanisolvens SD CC 1b]
 gi|229442875|gb|EEO48666.1| tyrosyl-tRNA synthetase [Bacteroides sp. D1]
 gi|229450408|gb|EEO56199.1| tyrosyl-tRNA synthetase [Bacteroides sp. 2_2_4]
 gi|262356535|gb|EEZ05625.1| tyrosyl-tRNA synthetase [Bacteroides sp. 2_1_22]
 gi|292640234|gb|EFF58489.1| tyrosine--tRNA ligase [Bacteroides ovatus SD CC 2a]
 gi|294442357|gb|EFG11167.1| tyrosine--tRNA ligase [Bacteroides xylanisolvens SD CC 1b]
          Length = 430

 Score =  255 bits (652), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 146/427 (34%), Positives = 227/427 (53%), Gaps = 22/427 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG +  I    E   L S+  VTAY+G D TA SLH GHL  +M+L   Q+ 
Sbjct: 2   NFVEELRWRGMLQDIMPGTEE--LLSKEQVTAYLGIDPTADSLHIGHLCGVMILRHFQRC 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD-ALM 125
           GHKP++L+GG T +IGDPS +   R ++  + ++ N   IK   + F+ + +   + A +
Sbjct: 60  GHKPLALIGGATGMIGDPSGKSAERNLLDEETLRHNQACIKNQLAKFLDFESDVPNRAEL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQAYD 183
           +NN  W+    ++D +RE+G   +VN M++ +SV+ RL  E    LSF EF Y +LQ YD
Sbjct: 120 VNNYDWMKDFTFLDFVREVGKHITVNYMMAKDSVKRRLNGEARDGLSFTEFTYQLLQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ L +   C+LQMGGSDQWGNI  G +L  R    ++FALT PL+T A G K GKT SG
Sbjct: 180 FLHLYETKGCKLQMGGSDQWGNITTGAELIRRTNGGEVFALTCPLITKADGGKFGKTESG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKKI 301
            IWL+   TSPY F+Q+W N+ D+D   + K  T++   EI+ +     +   +   +K 
Sbjct: 240 NIWLDARYTSPYKFYQFWLNVSDSDAERYIKIFTSIEKEEIEALIAEHQEAPHLRLLQKR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDEVS 347
           +A E+T MVH  ++   A  A+   F  +                 + +P   IS+D ++
Sbjct: 300 LAKEVTVMVHSEDDYNAAVDASNILFGNATSEALRKLDEDTLLAVFEGVPQFEISRDVLA 359

Query: 348 RGMGLLTLIV-KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+  + L V  A    S  E R+ ++   + +N   ++     +   D      + +  
Sbjct: 360 EGVKAVDLFVDNAAVFASKGEMRKLVQGGGVSLNKEKLAAFDQVVTTADLLDEKYLLVQR 419

Query: 407 GKKNHII 413
           GKKN+ +
Sbjct: 420 GKKNYYL 426


>gi|242242993|ref|ZP_04797438.1| tyrosyl-tRNA synthetase [Staphylococcus epidermidis W23144]
 gi|242233594|gb|EES35906.1| tyrosyl-tRNA synthetase [Staphylococcus epidermidis W23144]
 gi|319401041|gb|EFV89260.1| tyrosyl-tRNA synthetase [Staphylococcus epidermidis FRI909]
          Length = 421

 Score =  255 bits (651), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 137/379 (36%), Positives = 215/379 (56%), Gaps = 20/379 (5%)

Query: 15  RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLM 74
           RG I+Q ++   ++ L ++  VT Y G D TA SLH GHL   + L   Q+ GH+PI L+
Sbjct: 12  RGLIYQQTDEEGIEELLNKEQVTLYCGADPTADSLHIGHLLPFLTLRRFQEHGHRPIVLI 71

Query: 75  GGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCS 134
           GGGT +IGDPS + E R +    +++ N++ +        ++ + K  A ++NN+ WL  
Sbjct: 72  GGGTGMIGDPSGKSEERVLQTESQVEANVKGLSNQMHRLFEFDSDKG-AQLVNNKDWLGQ 130

Query: 135 IKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCR 194
           I  I  LR+ G    VN ML  +S+++RL  E  +S+ EF Y ILQA DF  L +  +C+
Sbjct: 131 ISLISFLRDYGKHVGVNYMLGKDSIQTRL--EHGISYTEFTYTILQAIDFGYLNRELNCK 188

Query: 195 LQMGGSDQWGNIICGIDLGERL-KTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTS 253
           +Q+GGSDQWGNI  GI+L  R+    + + LT PL+T + G K GK+ SGA+WL+ E TS
Sbjct: 189 IQVGGSDQWGNITSGIELMRRMYGQTEAYGLTIPLVTKSDGKKFGKSESGAVWLDPEKTS 248

Query: 254 PYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKKIIATEITTMVH 311
           PY F+Q+W N  D DV+ F K  T L   EI+R+  +K +   + EA+K +A  +T  +H
Sbjct: 249 PYEFYQFWINQSDEDVIKFLKYFTFLEKEEINRLEQSKNEAPHLREAQKALAENVTKFIH 308

Query: 312 GREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIVKAGF 361
           G    + A   +   F   + S          + +P +++S    ++   ++  +++ G 
Sbjct: 309 GEAALKDAIRISKALFSGDLKSLSAKELKEGFKDVPQVTLS----TKTTNIIEALIETGI 364

Query: 362 ATSTNEARRHLKSNAIKIN 380
           A+S  +AR  + + AI IN
Sbjct: 365 ASSKRQAREDVNNGAIYIN 383


>gi|19552623|ref|NP_600625.1| tyrosyl-tRNA synthetase [Corynebacterium glutamicum ATCC 13032]
 gi|62390291|ref|YP_225693.1| tyrosyl-tRNA synthetase [Corynebacterium glutamicum ATCC 13032]
 gi|81760803|sp|Q8NQM8|SYY_CORGL RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|21324174|dbj|BAB98799.1| Tyrosyl-tRNA synthetase [Corynebacterium glutamicum ATCC 13032]
 gi|41325628|emb|CAF21417.1| TYROSYL-TRNA SYNTHETASE [Corynebacterium glutamicum ATCC 13032]
          Length = 420

 Score =  255 bits (651), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 150/419 (35%), Positives = 230/419 (54%), Gaps = 17/419 (4%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           LS RG I+Q ++   L    S   +T Y G+D T  SLHAGHL  L++L   Q+ GH PI
Sbjct: 7   LSWRGLINQSTDLEALREEAST-PITLYCGFDPTGPSLHAGHLVPLLMLRRFQQAGHNPI 65

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQE-IQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
            L GG T +IGDP  RD   R M S + + +  E+I G  S F+ +  G+  A ++NN  
Sbjct: 66  VLAGGATGMIGDP--RDVGERTMNSADTVSDWAERISGQLSRFVDF-DGEHAARLVNNAE 122

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           W   +  +  LR++G  FS+N ML+ ++V+ RL+ +  +S+ EF+YM+LQA D+VEL K 
Sbjct: 123 WTNEMSVVTFLRDVGKHFSLNTMLARDTVKRRLESD-GISYTEFSYMLLQANDYVELNKR 181

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK-TLSGAIWLNK 249
           + C LQ+GG DQWGNI+ G+DL  R+    + A+T PL+T + G K GK T  G++WL+ 
Sbjct: 182 FGCTLQVGGGDQWGNIVSGVDLNRRVNGTSVHAVTVPLVTDSDGKKFGKSTGGGSLWLDP 241

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIATEIT 307
           EMTSPY ++QY+ N  DADV+ + +  T L   E+  +     +     EA++ +A E+T
Sbjct: 242 EMTSPYAWYQYFINASDADVIRYLRWFTFLTQEELAELEVEVAERPFKREAQRRLAREMT 301

Query: 308 TMVHGREEAEKAATAAMECF--------DMSIHSQHMPTISISKDEVSRGMGLLTLIVKA 359
            +VHG E  E    AA   F        D    +  +   ++++ +      ++ L+V +
Sbjct: 302 NLVHGTEATEAVELAAQALFGRAELRDLDEKTLAASVSETAVAEIKAGEPRTIIDLLVAS 361

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLCG 418
           G A S   A+R +K     +NN  I ++  +   +D      + L  GKKN     + G
Sbjct: 362 GLADSKGAAKRAVKEGGAYVNNERIESDDWEPFAEDLLHGSWLVLRRGKKNFAGVQILG 420


>gi|229020309|ref|ZP_04177076.1| Tyrosyl-tRNA synthetase [Bacillus cereus AH1273]
 gi|229026534|ref|ZP_04182885.1| Tyrosyl-tRNA synthetase [Bacillus cereus AH1272]
 gi|228734760|gb|EEL85403.1| Tyrosyl-tRNA synthetase [Bacillus cereus AH1272]
 gi|228740981|gb|EEL91212.1| Tyrosyl-tRNA synthetase [Bacillus cereus AH1273]
          Length = 420

 Score =  255 bits (651), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 148/419 (35%), Positives = 222/419 (52%), Gaps = 21/419 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG ++Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  GH P+
Sbjct: 7   LEWRGAVNQQTDEEGLRKLVEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLAGHHPV 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+GG T  IGDPS R   R++   + +Q N++ +         +G G ++  M+NN  W
Sbjct: 67  ILIGGATGTIGDPSGRQSERQLQTLEVVQHNVDALTVQMKKLFDFG-GNSEVKMVNNYDW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
              I  I+ LR+ G  FS+N ML+ + V SRL  +  +SF EF Y ILQA DF  L    
Sbjct: 126 THEINIIEFLRDYGKNFSINSMLAKDIVASRL--DTGISFTEFTYQILQAMDFHHLYTKE 183

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLK--TPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
           D +LQ+GGSDQWGNI  G+DL  +L+    K+F LT PLL  + GTK GK+  GA+WL+ 
Sbjct: 184 DVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSAGGAVWLDP 243

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN--EAKKIIATEIT 307
           E T+P+ F+Q+W N DD DV+ + K  T L    ID +A     E +  EA+K++A E+T
Sbjct: 244 EKTTPFEFYQFWVNTDDRDVIKYLKYFTFLQKERIDELAAKVETEPHKREAQKVLAEEMT 303

Query: 308 TMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIV 357
             VHG E   +A       F   I S          + MPT   SK++ +    ++  +V
Sbjct: 304 KFVHGEEAFLQAVKITAALFSGDIKSLTADEIEQGFKEMPTFESSKEKKN----IVEWLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             G   S  +AR  + + AI +N   +++    + +++      I +  GKKN+ +  L
Sbjct: 360 DLGIEPSRRQAREDINNGAISMNGEKVTDVATDVTVENSFDGRFIIIRKGKKNYSLVKL 418


>gi|228961312|ref|ZP_04122929.1| Tyrosyl-tRNA synthetase [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|228798365|gb|EEM45361.1| Tyrosyl-tRNA synthetase [Bacillus thuringiensis serovar pakistani
           str. T13001]
          Length = 420

 Score =  255 bits (651), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 149/419 (35%), Positives = 221/419 (52%), Gaps = 21/419 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG ++Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  GH P+
Sbjct: 7   LEWRGAVNQQTDEEGLRKLVEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLAGHHPV 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+GG T  IGDPS R   R++   + +Q N++ +         +G G ++  M+NN  W
Sbjct: 67  ILIGGATGTIGDPSGRQSERQLQTLEVVQHNVDALTAQMKKLFDFG-GNSEVKMVNNYDW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
              I  I+ LR+ G  FS+N ML+ + V SRL  +  +SF EF Y ILQA DF  L    
Sbjct: 126 THEINIIEFLRDYGKNFSINSMLAKDIVASRL--DTGISFTEFTYQILQAMDFHHLYTKE 183

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLK--TPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
           D +LQ+GGSDQWGNI  G+DL  +L+    K+F LT PLL  + GTK GK+  GA+WL+ 
Sbjct: 184 DVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSAGGAVWLDP 243

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN--EAKKIIATEIT 307
           E T+P+ F+Q+W N DD DVV + K  T L    ID +A     E +  EA+K++A E+T
Sbjct: 244 EKTTPFEFYQFWVNTDDRDVVKYLKYFTFLTKERIDELAVKVETEPHKREAQKVLAEEMT 303

Query: 308 TMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIV 357
             VHG E   +A       F   I S          + MPT   SK+  +    ++  +V
Sbjct: 304 KFVHGEEAFLQAEKITAALFSGDIKSLTADEIEQGFKEMPTFQSSKETKN----IVEWLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             G   S  +AR  + + AI +N   +++    + +++      I +  GKKN+ +  L
Sbjct: 360 DLGIEPSRRQAREDINNGAISMNGEKVTDVGTDVTVENSFDGRFIIIRKGKKNYSLVKL 418


>gi|194467546|ref|ZP_03073533.1| tyrosyl-tRNA synthetase [Lactobacillus reuteri 100-23]
 gi|194454582|gb|EDX43479.1| tyrosyl-tRNA synthetase [Lactobacillus reuteri 100-23]
          Length = 416

 Score =  255 bits (651), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 156/424 (36%), Positives = 235/424 (55%), Gaps = 24/424 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D L+ L  RG I+Q+++   L  L S+  +  Y G D T  SLH GHL   M+L   Q  
Sbjct: 2   DILNELEWRGAINQVTDEEGLRKLTSEDKIALYCGTDPTGDSLHIGHLIPFMILKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P+ ++GGGT  IGDPS R   R++    ++  N E +    ++ +K   G  +  ++
Sbjct: 62  GHHPVIIIGGGTGAIGDPSGRKSERQLQTMDQVHHNEEAL----TAQMKKLFGTENFTIV 117

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  I  +D LR+ G  F++N ML+ E V SRL  +  +SF EF Y ILQ+ DF+ 
Sbjct: 118 NNYEWLSKISLLDFLRDYGKLFNINTMLNKEVVASRL--DAGISFTEFTYQILQSVDFLH 175

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSGA 244
           L ++ D +LQ+GGSDQWGNI  GIDL  +++ P  K++ LT PL+  A GTK GKT  GA
Sbjct: 176 LYRHNDVQLQIGGSDQWGNITAGIDLIHKVEGPDTKVYGLTIPLMLKADGTKFGKTAGGA 235

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKII 302
           IWL+ E TSPY F+Q+W N DD DV+ + K  T L   EID +A+   KE    EA++ +
Sbjct: 236 IWLDPEKTSPYEFYQFWINQDDRDVIKYLKYFTFLSKEEIDDLAEKVEKEPWKREAQRRL 295

Query: 303 ATEITTMVHGREEAEKAATAAMECF-----DMSIHS-----QHMPTISISKDEVSRGMGL 352
           A E+T  VHG+E  E+A   +   F     D+S        ++MP++ +     ++   +
Sbjct: 296 AQEVTKFVHGQEAVEEAERISKALFSGDVADLSAAEIEQGFKNMPSVDVE----NKKENI 351

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           +  +   G   S  +AR+ + S AI+IN   + +   +I  Q       + +  GKK++ 
Sbjct: 352 VVWLTDNGIEPSRRQARQDVSSGAIRINGEKVDDVDAEIDPQAHFDGKFVIVRKGKKHYY 411

Query: 413 ICHL 416
           +  +
Sbjct: 412 LARV 415


>gi|262172421|ref|ZP_06040099.1| tyrosyl-tRNA synthetase [Vibrio mimicus MB-451]
 gi|261893497|gb|EEY39483.1| tyrosyl-tRNA synthetase [Vibrio mimicus MB-451]
          Length = 426

 Score =  255 bits (651), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 159/422 (37%), Positives = 230/422 (54%), Gaps = 23/422 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG I Q S P E  +         Y G+D TA SLH GHL  L++L   Q  GH+ I
Sbjct: 10  LQQRGLIAQ-STPLEALVERFTTPQVLYCGFDPTAGSLHIGHLVPLLMLKRFQDAGHQAI 68

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM-LNNET 130
           +L+GG T +IGDPSF+   R +  +Q +Q+ +  +    +  +   +     L+ +NN  
Sbjct: 69  ALIGGATGMIGDPSFKANERALNSAQTVQQWVSDLSQQITHLMASQSENPAQLITVNNAD 128

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDFVELAK 189
           W+  I  ID  R++G  FSVN M++ ESV+ RL R +Q +SF EF+Y +LQ+YDF  L +
Sbjct: 129 WIGKINLIDFFRDVGKHFSVNAMINRESVKQRLARPDQGISFTEFSYSLLQSYDFAHLNR 188

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
            + C LQ+GG+DQWGNI+ GIDL  RL   ++  LT PL+T + GTK GKT SGA+WL  
Sbjct: 189 EFGCTLQIGGNDQWGNIVSGIDLTRRLNGAEVCGLTLPLITKSDGTKFGKTESGAVWLES 248

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEIT 307
             TSPY F+Q+W N DDADV  F    T L  +EI+  R A        +A++I+A  +T
Sbjct: 249 SKTSPYRFYQFWLNSDDADVYRFLAYYTFLSTAEIEEIRQADALRAGKPQAQQILAEHVT 308

Query: 308 TMVHGRE--EAEKAATAAMECFDMSIHS---------QHMPTISISKDEVSRGMGLLTLI 356
             VHG E   A +  T A+   D+S  S           +P ++ S+ +       L L+
Sbjct: 309 RFVHGEEGLAAAQRITQALFSGDLSYLSLSELAQLELDGLPCVAASRTDSL-----LDLL 363

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           + +G A+S  +AR  L++ AI++N   +  E +      FD      L  GKK   +  L
Sbjct: 364 LSSGLASSKRQAREWLENGAIRVNGERVQQEGVLSGFALFDRY--YVLQRGKKQFALIKL 421

Query: 417 CG 418
            G
Sbjct: 422 EG 423


>gi|229193348|ref|ZP_04320298.1| Tyrosyl-tRNA synthetase [Bacillus cereus ATCC 10876]
 gi|228590149|gb|EEK48018.1| Tyrosyl-tRNA synthetase [Bacillus cereus ATCC 10876]
          Length = 419

 Score =  255 bits (651), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 148/419 (35%), Positives = 221/419 (52%), Gaps = 21/419 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG ++Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  GH P+
Sbjct: 7   LEWRGAVNQQTDEEGLRKLVEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLAGHHPV 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+GG T  IGDPS R   R++   + +Q N++ +         +G G ++  M+NN  W
Sbjct: 67  ILIGGATGTIGDPSGRQSERQLQTLEVVQHNVDALTAQMKKLFDFG-GNSEVKMVNNYDW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
              I  I+ LR+ G  FS+N ML+ + V SRL  +  +SF EF Y ILQA DF  L    
Sbjct: 126 THEINIIEFLRDYGKNFSINSMLAKDIVASRL--DTGISFTEFTYQILQAMDFHHLYTKE 183

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLK--TPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
           D +LQ+GGSDQWGNI  G+DL  +L+    K+F LT PLL  + GTK GK+  GA+WL+ 
Sbjct: 184 DVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSAGGAVWLDS 243

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN--EAKKIIATEIT 307
           E T+P+ F+Q+W N DD DV+ + K  T L    ID +A     E +  EA+K++A E+T
Sbjct: 244 EKTTPFEFYQFWVNTDDRDVIKYLKYFTFLTKERIDELATKVEAEPHKREAQKVLAEEMT 303

Query: 308 TMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIV 357
             VHG E   +A       F   I S          + MPT   SK+  +    ++  +V
Sbjct: 304 KFVHGEEAFLQAEKITAALFSGDIKSLTADEIEQGFKEMPTFQSSKETKN----IVEWLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             G   S  +AR  + + AI +N   +++    + +++      I +  GKKN+ +  L
Sbjct: 360 DLGIEPSRRQAREDINNGAISMNGEKVTDVGTDVTVENSFDGRFIIIRKGKKNYSLVKL 418


>gi|218231964|ref|YP_002369874.1| tyrosyl-tRNA synthetase [Bacillus cereus B4264]
 gi|229153258|ref|ZP_04281436.1| Tyrosyl-tRNA synthetase [Bacillus cereus m1550]
 gi|296505505|ref|YP_003667205.1| tyrosyl-tRNA synthetase [Bacillus thuringiensis BMB171]
 gi|218159921|gb|ACK59913.1| tyrosine--tRNA ligase [Bacillus cereus B4264]
 gi|228629862|gb|EEK86513.1| Tyrosyl-tRNA synthetase [Bacillus cereus m1550]
 gi|296326557|gb|ADH09485.1| tyrosyl-tRNA synthetase [Bacillus thuringiensis BMB171]
          Length = 420

 Score =  255 bits (651), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 148/419 (35%), Positives = 221/419 (52%), Gaps = 21/419 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG ++Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  GH P+
Sbjct: 7   LEWRGAVNQQTDEEGLRKLVEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLAGHHPV 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+GG T  IGDPS R   R++   + +Q N++ +         +G G ++  M+NN  W
Sbjct: 67  ILIGGATGTIGDPSGRQSERQLQTLEVVQHNVDALTAQMKKLFDFG-GNSEVKMVNNYDW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
              I  I+ LR+ G  FS+N ML+ + V SRL  +  +SF EF Y ILQA DF  L    
Sbjct: 126 THEINIIEFLRDYGKNFSINSMLAKDIVASRL--DTGISFTEFTYQILQAMDFHHLYTKE 183

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLK--TPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
           D +LQ+GGSDQWGNI  G+DL  +L+    K+F LT PLL  + GTK GK+  GA+WL+ 
Sbjct: 184 DVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSAGGAVWLDP 243

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN--EAKKIIATEIT 307
           E T+P+ F+Q+W N DD DV+ + K  T L    ID +A     E +  EA+K++A E+T
Sbjct: 244 EKTTPFEFYQFWVNTDDRDVIKYLKYFTFLTKERIDELATKVEAEPHKREAQKVLAEEMT 303

Query: 308 TMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIV 357
             VHG E   +A       F   I S          + MPT   SK+  +    ++  +V
Sbjct: 304 KFVHGEEAFLQAEKITAALFSGDIKSLTADEIEQGFKEMPTFQSSKETKN----IVEWLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             G   S  +AR  + + AI +N   +++    + +++      I +  GKKN+ +  L
Sbjct: 360 DLGIEPSRRQAREDINNGAISMNGEKVTDVGTDVTVENSFDGRFIIIRKGKKNYSLVKL 418


>gi|326801292|ref|YP_004319111.1| Tyrosyl-tRNA synthetase [Sphingobacterium sp. 21]
 gi|326552056|gb|ADZ80441.1| Tyrosyl-tRNA synthetase [Sphingobacterium sp. 21]
          Length = 430

 Score =  255 bits (651), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 143/427 (33%), Positives = 226/427 (52%), Gaps = 22/427 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG +  I    E  +   +GV + YIG+D T  SLH GHLTQ+M L   Q+ 
Sbjct: 2   NFVDELRWRGMLQDIMPGTEEQL--EKGVTSGYIGFDPTGDSLHVGHLTQIMTLIHFQRA 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG--TGKTD-A 123
           GH+PI+L+GG T +IGDPSF+   R ++  + ++ N+  ++     F+ +   +GK + A
Sbjct: 60  GHRPIALVGGATGMIGDPSFKSAERNLLDEETLRHNVSCLEKQLRKFLDFDNQSGKGNGA 119

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           +M+NN  W    K++D +R++G   +VN M++ +SV+ RL+ E  LSF EF+Y ++Q YD
Sbjct: 120 IMVNNYDWFKDFKFLDFIRDVGKLITVNYMMAKDSVKKRLEGENGLSFTEFSYQLIQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F  L K+  C +QMGGSDQWGNI+ G +   R      F LT+ L+    GTK GKT SG
Sbjct: 180 FYYLWKHKGCMIQMGGSDQWGNIVTGSEFIRRQDGGSAFGLTTQLIKKTDGTKFGKTESG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKKI 301
           A+WL+ + TSPY ++Q+W N  D D  ++ K  T    +EID +         +   +K 
Sbjct: 240 AVWLDAKKTSPYKYYQFWLNASDEDAKNWIKIFTLKDKAEIDSIIAEHDAAPHLRIVQKA 299

Query: 302 IATEITTMVHGREEAEKAAT--------------AAMECFDMSIHSQHMPTISISKDEVS 347
           +A +IT   H     + A                + M+  D+      +P   I K+E+ 
Sbjct: 300 LAEDITIRTHSVSAYQMAVKTSEFLFGSGSLDFLSGMDDADVLDVFDGVPQSVIRKEELK 359

Query: 348 RGMGLLTLI-VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+ ++ L+   A    S  EAR+ ++   + IN   + +    I L +  +   I    
Sbjct: 360 NGINVVDLLSTYASVFPSKGEARKMIQGGGVSINREKVGSVDQTIDLSNLINNKYIIAQK 419

Query: 407 GKKNHII 413
           GKKN+ +
Sbjct: 420 GKKNYFL 426


>gi|228955333|ref|ZP_04117341.1| Tyrosyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|228804466|gb|EEM51077.1| Tyrosyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
          Length = 419

 Score =  255 bits (651), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 148/419 (35%), Positives = 221/419 (52%), Gaps = 21/419 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG ++Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  GH P+
Sbjct: 7   LEWRGAVNQQTDEEGLRKLVEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLAGHHPV 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+GG T  IGDPS R   R++   + +Q N++ +         +G G ++  M+NN  W
Sbjct: 67  ILIGGATGTIGDPSGRQSERQLQTLEVVQHNVDALTAQMKKLFDFG-GNSEVKMVNNYDW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
              I  I+ LR+ G  FS+N ML+ + V SRL  +  +SF EF Y ILQA DF  L    
Sbjct: 126 THEINIIEFLRDYGKNFSINSMLAKDIVASRL--DTGISFTEFTYQILQAMDFHHLYTKE 183

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLK--TPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
           D +LQ+GGSDQWGNI  G+DL  +L+    K+F LT PLL  + GTK GK+  GA+WL+ 
Sbjct: 184 DVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSAGGAVWLDP 243

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN--EAKKIIATEIT 307
           E T+P+ F+Q+W N DD DV+ + K  T L    ID +A     E +  EA+K++A E+T
Sbjct: 244 EKTTPFEFYQFWVNTDDRDVIKYLKYFTFLTKERIDELATKVETEPHKREAQKVLAEEMT 303

Query: 308 TMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIV 357
             VHG E   +A       F   I S          + MPT   SK+  +    ++  +V
Sbjct: 304 KFVHGEEAFLQAEKITAALFSGDIKSLTADEIEQGFKEMPTFQSSKETKN----IVEWLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             G   S  +AR  + + AI +N   +++    + +++      I +  GKKN+ +  L
Sbjct: 360 DLGIEPSRRQAREDINNGAISMNGEKVTDVGTDVTVENSFDGRFIIIRKGKKNYSLVKL 418


>gi|229112512|ref|ZP_04242049.1| Tyrosyl-tRNA synthetase [Bacillus cereus Rock1-15]
 gi|228670892|gb|EEL26199.1| Tyrosyl-tRNA synthetase [Bacillus cereus Rock1-15]
          Length = 420

 Score =  254 bits (650), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 148/419 (35%), Positives = 221/419 (52%), Gaps = 21/419 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG ++Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  GH P+
Sbjct: 7   LEWRGAVNQQTDEEGLRKLVEEKKISLYCGVDPTGDSMHIGHLIPFMMIKRFQLAGHHPV 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+GG T  IGDPS R   R++   + +Q N++ +         +G G ++  M+NN  W
Sbjct: 67  ILIGGATGTIGDPSGRQSERQLQTLEVVQHNVDALTAQMKKLFDFG-GNSEVKMVNNYDW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
              I  I+ LR+ G  FS+N ML+ + V SRL  +  +SF EF Y ILQA DF  L    
Sbjct: 126 THEINIIEFLRDYGKNFSINSMLAKDIVASRL--DTGISFTEFTYQILQAMDFHHLYTKE 183

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLK--TPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
           D +LQ+GGSDQWGNI  G+DL  +L+    K+F LT PLL  + GTK GK+  GA+WL+ 
Sbjct: 184 DVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSAGGAVWLDP 243

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN--EAKKIIATEIT 307
           E T+P+ F+Q+W N DD DV+ + K  T L    ID +A     E +  EA+K++A E+T
Sbjct: 244 EKTTPFEFYQFWVNTDDRDVIKYLKYFTFLTKERIDELATKVEAEPHKREAQKVLAEEMT 303

Query: 308 TMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIV 357
             VHG E   +A       F   I S          + MPT   SK+  +    ++  +V
Sbjct: 304 KFVHGEEAFLQAEKITAALFSGDIKSLTADEIEQGFKEMPTFQSSKETKN----IVEWLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             G   S  +AR  + + AI +N   +++    + +++      I +  GKKN+ +  L
Sbjct: 360 DLGIEPSRRQAREDINNGAISMNGEKVTDVGTDVTVENSFDGRFIIIRKGKKNYSLVKL 418


>gi|255693353|ref|ZP_05417028.1| tyrosine--tRNA ligase [Bacteroides finegoldii DSM 17565]
 gi|260620930|gb|EEX43801.1| tyrosine--tRNA ligase [Bacteroides finegoldii DSM 17565]
          Length = 430

 Score =  254 bits (650), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 147/427 (34%), Positives = 226/427 (52%), Gaps = 22/427 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG +  I    E   L S+  VTAY+G D TA SLH GHL  +M+L   Q+ 
Sbjct: 2   NFVEELRWRGMLQDIMPGTEE--LLSKEQVTAYLGIDPTADSLHIGHLCGVMILRHFQRC 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD-ALM 125
           GHKP++L+GG T +IGDPS +   R ++  + ++ N   IK   + F+ + +   + A +
Sbjct: 60  GHKPLALIGGATGMIGDPSGKSAERNLLDEETLRHNQACIKKQLAKFLDFESDVPNRAEL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQAYD 183
           +NN  W+    ++D  R++G   +VN M++ +SV+ RL  E    LSF EF Y +LQ YD
Sbjct: 120 VNNYDWMKDFSFLDFARKVGKHITVNYMMAKDSVKRRLNGEARDGLSFTEFTYQLLQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ L +   C+LQMGGSDQWGNI  G +L  R    ++FALT PL+T A G K GKT SG
Sbjct: 180 FLHLYETKGCKLQMGGSDQWGNITTGAELIRRTNGGEVFALTCPLITKADGGKFGKTESG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKKI 301
            IWL+   TSPY F+Q+W N+ D+D   + K  T++   EI+ +     +   +   +K 
Sbjct: 240 NIWLDSRYTSPYKFYQFWLNVSDSDAERYIKIFTSIEKEEIEALIAEHREAPHLRILQKR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDEVS 347
           +A E+T MVH  E+   A  A+   F  +                 + +P   IS+D ++
Sbjct: 300 LAKEVTVMVHSEEDYNAAVDASNILFGNATSEALRKLDEDTLLAVFEGVPQFEISRDALA 359

Query: 348 RGMGLLTLIV-KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+  + L V  A    S  E R+ ++   + +N   ++     I   D      + +  
Sbjct: 360 EGVKAVDLFVDNAAVFASKGEMRKLVQGGGVSLNKEKLAAFDQVITAADLLDEKYLLVQR 419

Query: 407 GKKNHII 413
           GKKN+ +
Sbjct: 420 GKKNYYL 426


>gi|153828422|ref|ZP_01981089.1| tyrosyl-tRNA synthetase [Vibrio cholerae 623-39]
 gi|148876131|gb|EDL74266.1| tyrosyl-tRNA synthetase [Vibrio cholerae 623-39]
          Length = 434

 Score =  254 bits (650), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 159/422 (37%), Positives = 230/422 (54%), Gaps = 23/422 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG I Q S P E  +         Y G+D TA SLH GHL  L++L   Q  GH+ I
Sbjct: 18  LQQRGLIAQ-STPLEALVERFTTPQVLYCGFDPTAGSLHIGHLVPLLMLKRFQDAGHQAI 76

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM-LNNET 130
           +L+GG T +IGDPSF+   R +  +Q +Q+ +  +    +  +   +     L+ +NN  
Sbjct: 77  ALIGGATGMIGDPSFKANERALNSAQTVQQWVSDLSQQITHLMASQSENPAQLITVNNAD 136

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDFVELAK 189
           W+  I  ID  R++G  FSVN M++ ESV+ RL R +Q +SF EF+Y +LQ+YDF  L +
Sbjct: 137 WIGKINLIDFFRDVGKHFSVNTMINRESVKQRLARPDQGISFTEFSYSLLQSYDFAHLNR 196

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
            + C LQ+GG+DQWGNI+ GIDL  RL   ++  LT PL+T + GTK GKT SGA+WL  
Sbjct: 197 EFGCTLQIGGNDQWGNIVSGIDLTRRLNGAEVCGLTLPLITKSDGTKFGKTESGAVWLES 256

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEIT 307
             TSPY F+Q+W N DDADV  F    T L  +EI+  R A        +A++I+A  +T
Sbjct: 257 SKTSPYRFYQFWLNSDDADVYRFLAYYTFLSTAEIEEIRQADALRAGKPQAQQILAEHVT 316

Query: 308 TMVHGRE--EAEKAATAAMECFDMSIHS---------QHMPTISISKDEVSRGMGLLTLI 356
             VHG E   A +  T A+   D+S  S           +P ++ S+ +       L L+
Sbjct: 317 RFVHGEEGLAAAQRITQALFSGDLSYLSLSELAQLELDGLPCVAASRTDSL-----LDLL 371

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           + +G A+S  +AR  L++ AI++N   +  E +      FD      L  GKK   +  L
Sbjct: 372 LSSGLASSKRQAREWLENGAIRVNGERVQQEGVLSGFALFDRY--YVLQRGKKQFALIKL 429

Query: 417 CG 418
            G
Sbjct: 430 EG 431


>gi|297580604|ref|ZP_06942530.1| tyrosyl-tRNA synthetase [Vibrio cholerae RC385]
 gi|297535020|gb|EFH73855.1| tyrosyl-tRNA synthetase [Vibrio cholerae RC385]
          Length = 434

 Score =  254 bits (650), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 152/391 (38%), Positives = 221/391 (56%), Gaps = 21/391 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG I Q S P E  +         Y G+D TA SLH GHL  L++L   Q  GH+ I
Sbjct: 18  LQQRGLIAQ-STPLEALVERFAMPQVLYCGFDPTAGSLHIGHLVPLLMLKRFQNAGHQAI 76

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM-LNNET 130
           +L+GG T +IGDPSF+   R +  +Q +Q+ +  +    +  +   +    +LM +NN  
Sbjct: 77  ALIGGATGMIGDPSFKANERVLNSAQTVQQWVSDLSQQITQLMASQSENCASLMTVNNAD 136

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDFVELAK 189
           W+  I  ID  R++G  FSVN M++ ESV+ RL R +Q +SF EF+Y +LQ+YDF  L +
Sbjct: 137 WIGKINLIDFFRDVGKHFSVNTMINRESVKQRLARPDQGISFTEFSYSLLQSYDFAHLNR 196

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
            + C LQ+GG+DQWGNI+ GIDL  RL   ++  LT PL+T + GTK GKT SGA+WL  
Sbjct: 197 EFGCALQIGGNDQWGNIVSGIDLTRRLNGAEVCGLTLPLITKSDGTKFGKTESGAVWLES 256

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEIT 307
             TSPY F+Q+W N DDADV  F    T L  +EI+  R A        +A++I+A  +T
Sbjct: 257 SKTSPYRFYQFWLNSDDADVYRFLAYYTFLSTAEIEEIRQADALRAGKPQAQQILAEHVT 316

Query: 308 TMVHGRE--EAEKAATAAMECFDMSIHS---------QHMPTISISKDEVSRGMGLLTLI 356
             VHG E   A +  T A+   D+S  S           +P ++ S+ +       L L+
Sbjct: 317 RFVHGEEGLAAAQRITQALFSGDVSYLSLSELAQLELDGLPCVAASRTDSL-----LDLL 371

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNE 387
           + +G A+S  +AR  L++ AI++N   +  E
Sbjct: 372 LSSGLASSKRQAREWLENGAIRVNGERVQQE 402


>gi|47567310|ref|ZP_00238023.1| tyrosyl-tRNA synthetase [Bacillus cereus G9241]
 gi|47555931|gb|EAL14269.1| tyrosyl-tRNA synthetase [Bacillus cereus G9241]
          Length = 420

 Score =  254 bits (650), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 149/419 (35%), Positives = 221/419 (52%), Gaps = 21/419 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG ++Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  GH P+
Sbjct: 7   LEWRGAVNQQTDEEGLRKLVEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLAGHHPV 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+GG T  IGDPS R   R++   + +Q N++ +         +G G ++  M+NN  W
Sbjct: 67  ILIGGATGTIGDPSGRQSERQLQTLEVVQHNVDALTAQMKKLFDFG-GNSEVKMVNNYDW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
              I  I+ LR+ G  FS+N ML+ + V SRL  +  +SF EF Y ILQA DF  L    
Sbjct: 126 THEINIIEFLRDYGKNFSINSMLAKDIVASRL--DTGISFTEFTYQILQAMDFHHLYTKE 183

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLK--TPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
           D +LQ+GGSDQWGNI  G+DL  +L+    K+F LT PLL  + GTK GK+  GA+WL+ 
Sbjct: 184 DVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSAGGAVWLDP 243

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN--EAKKIIATEIT 307
           E T+P+ F+Q+W N DD DVV + K  T L    ID +A     E +  EA+K++A E+T
Sbjct: 244 EKTTPFEFYQFWVNTDDRDVVKYLKYFTFLMKERIDELAVKVETEPHKREAQKVLAEEMT 303

Query: 308 TMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIV 357
             VHG E   +A       F   I S          + MPT   SK+  +    ++  +V
Sbjct: 304 KFVHGEEAFLQAVKITAALFSGDIKSLTADEIEQGFKEMPTFQSSKETKN----IVEWLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             G   S  +AR  + + AI +N   +++    + +++      I +  GKKN+ +  L
Sbjct: 360 DLGIEPSRRQAREDINNGAISMNGEKVTDVGTDVTVENSFDGRFIIIRKGKKNYSLVKL 418


>gi|229164039|ref|ZP_04291976.1| Tyrosyl-tRNA synthetase [Bacillus cereus R309803]
 gi|228619422|gb|EEK76311.1| Tyrosyl-tRNA synthetase [Bacillus cereus R309803]
          Length = 419

 Score =  254 bits (650), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 149/419 (35%), Positives = 221/419 (52%), Gaps = 21/419 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I+Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  GH P+
Sbjct: 7   LDWRGAINQQTDEEGLRKLVEEKQISLYCGVDPTGDSMHIGHLIPFMMMKRFQLAGHHPV 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+GG T  IGDPS R   R++   + +Q N++ +         +G G ++  M+NN  W
Sbjct: 67  ILIGGATGTIGDPSGRQSERQLQTLEVVQHNVDALTAQMKKLFDFG-GNSEVKMVNNYDW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
              I  I+ LR+ G  FS+N ML+ + V SRL  +  +SF EF Y ILQA DF  L    
Sbjct: 126 THEINIIEFLRDYGKNFSINSMLAKDIVASRL--DTGISFTEFTYQILQAMDFHHLYTKE 183

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLK--TPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
           D +LQ+GGSDQWGNI  G+DL  +L+    K+F LT PLL  + GTK GK+  GA+WL+ 
Sbjct: 184 DVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSAGGAVWLDP 243

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN--EAKKIIATEIT 307
           E T+P+ F+Q+W N DD DVV + K  T L    ID +      E +  EA+K++A E+T
Sbjct: 244 EKTTPFEFYQFWVNTDDRDVVKYLKYFTFLTKERIDELVVKVETEPHKREAQKVLAEEMT 303

Query: 308 TMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIV 357
             VHG E   +A       F   I S          + MPT + SK+  +    ++  +V
Sbjct: 304 KFVHGEEAFLQAVKITAALFSGDIKSLTADEIEQGFKEMPTFNSSKETKN----IVEWLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             G   S  +AR  + + AI +N   +++    + +++      I +  GKKN+ +  L
Sbjct: 360 DLGIEPSRRQAREDINNGAISMNGEKVTDVGTDVTVENSFDGRFIIIRKGKKNYSLVKL 418


>gi|206970458|ref|ZP_03231411.1| tyrosyl-tRNA synthetase [Bacillus cereus AH1134]
 gi|229082314|ref|ZP_04214777.1| Tyrosyl-tRNA synthetase [Bacillus cereus Rock4-2]
 gi|206735035|gb|EDZ52204.1| tyrosyl-tRNA synthetase [Bacillus cereus AH1134]
 gi|228700746|gb|EEL53269.1| Tyrosyl-tRNA synthetase [Bacillus cereus Rock4-2]
          Length = 419

 Score =  254 bits (650), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 148/419 (35%), Positives = 221/419 (52%), Gaps = 21/419 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG ++Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  GH P+
Sbjct: 7   LEWRGAVNQQTDEEGLRKLVEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLAGHHPV 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+GG T  IGDPS R   R++   + +Q N++ +         +G G ++  M+NN  W
Sbjct: 67  ILIGGATGTIGDPSGRQSERQLQTLEVVQHNVDALTAQMKKLFDFG-GNSEVKMVNNYDW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
              I  I+ LR+ G  FS+N ML+ + V SRL  +  +SF EF Y ILQA DF  L    
Sbjct: 126 THEINIIEFLRDYGKNFSINSMLAKDIVASRL--DTGISFTEFTYQILQAMDFHHLYTKE 183

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLK--TPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
           D +LQ+GGSDQWGNI  G+DL  +L+    K+F LT PLL  + GTK GK+  GA+WL+ 
Sbjct: 184 DVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSAGGAVWLDP 243

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN--EAKKIIATEIT 307
           E T+P+ F+Q+W N DD DV+ + K  T L    ID +A     E +  EA+K++A E+T
Sbjct: 244 EKTTPFEFYQFWVNTDDRDVIKYLKYFTFLTKERIDELAAKVETEPHKREAQKVLAEEMT 303

Query: 308 TMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIV 357
             VHG E   +A       F   I S          + MPT   SK+  +    ++  +V
Sbjct: 304 KFVHGEEAFLQAEKITAALFSGDIKSLTADEIEQGFKEMPTFQSSKETKN----IVEWLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             G   S  +AR  + + AI +N   +++    + +++      I +  GKKN+ +  L
Sbjct: 360 DLGIEPSRRQAREDINNGAISMNGEKVTDVGTDVTVENSFDGRFIIIRKGKKNYSLVKL 418


>gi|229181362|ref|ZP_04308691.1| Tyrosyl-tRNA synthetase [Bacillus cereus 172560W]
 gi|228602098|gb|EEK59590.1| Tyrosyl-tRNA synthetase [Bacillus cereus 172560W]
          Length = 419

 Score =  254 bits (650), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 148/419 (35%), Positives = 221/419 (52%), Gaps = 21/419 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG ++Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  GH P+
Sbjct: 7   LEWRGAVNQQTDEEGLRKLVEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLAGHHPV 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+GG T  IGDPS R   R++   + +Q N++ +         +G G ++  M+NN  W
Sbjct: 67  ILIGGATGTIGDPSGRQSERQLQTLEVVQHNVDALTAQMKKLFDFG-GNSEVKMVNNYDW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
              I  I+ LR+ G  FS+N ML+ + V SRL  +  +SF EF Y ILQA DF  L    
Sbjct: 126 THEINIIEFLRDYGKNFSINSMLAKDIVASRL--DTGISFTEFTYQILQAMDFHHLYTKE 183

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLK--TPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
           D +LQ+GGSDQWGNI  G+DL  +L+    K+F LT PLL  + GTK GK+  GA+WL+ 
Sbjct: 184 DVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSAGGAVWLDP 243

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN--EAKKIIATEIT 307
           E T+P+ F+Q+W N DD DV+ + K  T L    ID +A     E +  EA+K++A E+T
Sbjct: 244 EKTTPFEFYQFWVNTDDRDVIKYLKYFTFLTKERIDELATKVEAEPHKREAQKVLAEEMT 303

Query: 308 TMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIV 357
             VHG E   +A       F   I S          + MPT   SK+  +    ++  +V
Sbjct: 304 KFVHGEEAFLQAEKITAALFSGDIKSLTADEIEQGFKEMPTFQSSKETKN----IVEWLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             G   S  +AR  + + AI +N   +++    + +++      I +  GKKN+ +  L
Sbjct: 360 DLGIEPSRRQAREDINNGAISMNGEKVTDVGTDVTVENSFDGRFIIIRKGKKNYSLIKL 418


>gi|116670073|ref|YP_831006.1| tyrosyl-tRNA synthetase [Arthrobacter sp. FB24]
 gi|116610182|gb|ABK02906.1| tyrosyl-tRNA synthetase [Arthrobacter sp. FB24]
          Length = 437

 Score =  254 bits (650), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 147/413 (35%), Positives = 232/413 (56%), Gaps = 21/413 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L+ RG +H  ++  EL+ L +   +T Y G+D TA SLH G+L QL+L+  LQ  GHKP+
Sbjct: 23  LNWRGLVHVSTDEVELEKLLAGDPITYYCGFDPTAPSLHLGNLVQLLLMRRLQLAGHKPL 82

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQE-IQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
            L+GG T +IGDP  R  + R + +++ + E +  ++     F+ +  G   A M+NN  
Sbjct: 83  GLVGGSTGLIGDP--RPTAERTLNTKDTVSEWVGYLQAQVRRFLSF-DGDNAARMVNNLD 139

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           W   +  ID LREIG  F V  ML  ++V SRL  ++ +S+ EF+Y ILQ  D+++L ++
Sbjct: 140 WTAPLSAIDFLREIGKHFRVGTMLRKDAVASRLSSDEGISYTEFSYQILQGMDYLQLFRD 199

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKE 250
           Y C L+ GGSDQWGN+  G +L  +++   + AL +PL+T + GTK GK+   AIWL+ E
Sbjct: 200 YGCVLETGGSDQWGNLTSGTELIRKVEGKHVHALGTPLITNSDGTKFGKSEGNAIWLDPE 259

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEITT 308
           M SPY F+Q+W N  DADV +  K  T L  +EI+   ++  +     E ++ +A E+T+
Sbjct: 260 MCSPYAFYQFWLNTADADVAARLKVFTFLTRAEIEALEVSIAERPFAREGQRRLAFEVTS 319

Query: 309 MVHGREEAEKAATAAMECFD-----------MSIHSQHMPTISISKDEVSRGMGLLTLIV 357
           +VHG E  EK   A+   F            +S  +  +P++ +  D    G G++ L+V
Sbjct: 320 LVHGVEATEKVIAASAALFGGGDLAALDEQTLSAATAELPSVRVDPD----GTGIVDLLV 375

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            +G A S + ARR +      +NN+ +++    I   +      + L  GKKN
Sbjct: 376 ASGLADSKSAARRTVGEGGAYVNNTKVTDPDAVIPGSELLHGRYLLLRRGKKN 428


>gi|145343694|ref|XP_001416448.1| Tyrosyl-tRNA synthetase, probable [Ostreococcus lucimarinus
           CCE9901]
 gi|144576673|gb|ABO94741.1| Tyrosyl-tRNA synthetase, probable [Ostreococcus lucimarinus
           CCE9901]
          Length = 484

 Score =  254 bits (650), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 140/428 (32%), Positives = 227/428 (53%), Gaps = 19/428 (4%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           ++S     L  RG +   +N   L+       +  Y G+D TA SLH G+L  +++L W 
Sbjct: 62  YESSVYGELHARGLVEACTNESVLE----GSSLRVYCGFDPTADSLHIGNLLGIVVLSWF 117

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           +K GH P++L+GG T  +GDPS +   R ++    I  N E I       +   +  T  
Sbjct: 118 EKYGHTPVALIGGATGRVGDPSGKSSERPILDETTIAVNAEAISNTIQKILTDNSTDTSL 177

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           +++NN  W   + ++D LR++G +  +  ML+ +SV+SRL  E  +SF EF Y +LQ YD
Sbjct: 178 IVVNNVDWYADMSFLDFLRDVGKYSRLGTMLAKDSVKSRLSSESGISFTEFAYQLLQGYD 237

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASGTKMGKTLS 242
           FV L ++    +Q+GGSDQWGNI  G DL  RL+ +  +  LT PLL  + GTK GK+  
Sbjct: 238 FVHLLRSQQVSVQVGGSDQWGNITAGTDLIRRLEPSADVSGLTFPLLLKSDGTKFGKSEQ 297

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAK 299
           GAIWL+    SPY F+QY+ N+DDADV+   K LT +P++E+   +R        +N  +
Sbjct: 298 GAIWLSTSRLSPYKFYQYFLNVDDADVIRLLKMLTFVPLAEVLEYERHMSQPSYIVNTVQ 357

Query: 300 KIIATEITTMVH---GREEAEKAATAAMECFDMSIHSQHM-------PTISISKDEVSRG 349
           + +A E+T  VH   G EEA+ A +      D  +    +       P+ ++   +V  G
Sbjct: 358 RRLAEEVTRFVHGVQGLEEAQAATSVLKPGADTDLDVTALTALEGIVPSATLPMQQV-LG 416

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
           + L+ L V  G   S    +R ++   +++NN  + +++  + + D      + L+ GKK
Sbjct: 417 ISLVQLAVDVGLQPSKGATKRLIQGGGLRLNNIKVLSDEATVSMADIVDGRLLLLAAGKK 476

Query: 410 NHIICHLC 417
           N ++  + 
Sbjct: 477 NKLLISVT 484


>gi|163791165|ref|ZP_02185583.1| tyrosyl-tRNA synthetase [Carnobacterium sp. AT7]
 gi|159873560|gb|EDP67646.1| tyrosyl-tRNA synthetase [Carnobacterium sp. AT7]
          Length = 421

 Score =  254 bits (650), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 152/421 (36%), Positives = 223/421 (52%), Gaps = 21/421 (4%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R  I+Q ++   L  L  Q  V  Y G D T  S+H GHL   M+L   Q  GH+P+
Sbjct: 7   LEWRDAINQQTDEVGLKKLIDQKAVGLYCGVDPTGDSMHIGHLIPFMILKRFQLAGHRPV 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            ++GG T  IGDPS + E R +  S+++Q N++K+          G  +    M+NN  W
Sbjct: 67  IVIGGATGSIGDPSGKSEERVLQTSEQVQNNVDKLTHQMEKLFDAGKNENSIRMVNNLDW 126

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
              I  +D LR IG  F+VN MLS + V SRL  E  +SF EF Y ILQ+ DF+ L ++ 
Sbjct: 127 TKEISLLDFLRNIGKSFNVNTMLSKDIVASRL--ETGISFTEFTYQILQSIDFLHLYQHE 184

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLK--TPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
           D +LQ+GG+DQWGNI  G++   + +    + + LT PL+  A GTK GKT  GAIWL+ 
Sbjct: 185 DVQLQIGGADQWGNITAGLEYIRKQEGSEAEAYGLTIPLMLKADGTKFGKTAGGAIWLDP 244

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN--EAKKIIATEIT 307
           E T+PY F+Q+W N DD DVV + K  T L   EID +A+    E +  EA+K +A+E+T
Sbjct: 245 EKTTPYEFYQFWLNQDDRDVVKYLKYFTFLTKEEIDALAEKIATEPHKREAQKTLASEMT 304

Query: 308 TMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIV 357
             VHG +  + A       F   + S          ++MPT    K+E +    L+ ++ 
Sbjct: 305 LFVHGEQALKDAEKITAALFSGDVKSLTADQIEEGFKNMPTFEAPKEEKNIVEWLVDVV- 363

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISN-EKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             G   S  +AR  +K+ A+ +N   +++ E +      FD    I +  GKK + +  L
Sbjct: 364 --GIEPSRRQAREDIKNGALSMNGEKVTDVEAIVTPENSFDER-FILIRKGKKKYFLVKL 420

Query: 417 C 417
            
Sbjct: 421 V 421


>gi|326804012|ref|YP_004321830.1| tyrosine--tRNA ligase [Aerococcus urinae ACS-120-V-Col10a]
 gi|326650892|gb|AEA01075.1| tyrosine--tRNA ligase [Aerococcus urinae ACS-120-V-Col10a]
          Length = 420

 Score =  254 bits (649), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 152/417 (36%), Positives = 218/417 (52%), Gaps = 23/417 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I+Q ++   L        ++ Y G D T  SLH GHL   ++L   Q  GH+P+
Sbjct: 7   LEWRGAINQQTDEAGLKDYVENHSISLYCGVDPTGDSLHIGHLIPFIMLKRFQLQGHRPV 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSS-FIKYGTGKTDALMLNNET 130
            L+GG T  IGDPS R E R++   + + EN  K+       F+K    +    ++NN  
Sbjct: 67  ILIGGATGSIGDPSGRSEERQLQSMEVVNENARKLTAQMEKLFLKDPNAQF--RLVNNYA 124

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           W   +  +D LR+ G  F++N ML+ + V SRL  E  +SF EF Y ILQ+ DF+ L + 
Sbjct: 125 WTKDLSLLDFLRDYGKLFNINTMLAKDVVASRL--EHGISFTEFTYQILQSMDFLHLYRE 182

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSGAIWLN 248
            D RLQ+GG+DQWGNI  G+DL  +++ P  K F LT PL+  A GTK GKT  GA+WL+
Sbjct: 183 EDVRLQIGGADQWGNITSGLDLIRKVEGPEAKAFGLTIPLMLKADGTKFGKTAGGAVWLD 242

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN--EAKKIIATEI 306
            E TSPY F+Q+W N DDADVV + K  T L   EI  +A+    E +  EA+K +A E+
Sbjct: 243 PEKTSPYEFYQFWVNQDDADVVKYLKYFTFLSKEEIAELAEKVATEPHKREAQKTLAKEM 302

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLI 356
           T  VHG E    A +     F   I +           +MP   + ++  +    L   +
Sbjct: 303 TLFVHGEEGLADALSITEALFSGDIKNLSAKQIEQGFNNMPGAQVPRETAN----LAVWL 358

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
           V  G  +S  ++R  +K+ AI IN   I +   +I   D      I +  GKK + +
Sbjct: 359 VDNGVESSRRQSREDIKNGAIYINGERIQDIDYEISPADAIEDKYIVVRRGKKKYFL 415


>gi|218900219|ref|YP_002448630.1| tyrosyl-tRNA synthetase [Bacillus cereus G9842]
 gi|228903572|ref|ZP_04067693.1| Tyrosyl-tRNA synthetase [Bacillus thuringiensis IBL 4222]
 gi|228968188|ref|ZP_04129188.1| Tyrosyl-tRNA synthetase [Bacillus thuringiensis serovar sotto str.
           T04001]
 gi|218544372|gb|ACK96766.1| tyrosyl-tRNA synthetase [Bacillus cereus G9842]
 gi|228791491|gb|EEM39093.1| Tyrosyl-tRNA synthetase [Bacillus thuringiensis serovar sotto str.
           T04001]
 gi|228856001|gb|EEN00540.1| Tyrosyl-tRNA synthetase [Bacillus thuringiensis IBL 4222]
          Length = 420

 Score =  254 bits (649), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 148/419 (35%), Positives = 221/419 (52%), Gaps = 21/419 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG ++Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  GH P+
Sbjct: 7   LEWRGAVNQQTDEEGLRKLVEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLAGHHPV 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+GG T  IGDPS R   R++   + +Q N++ +         +G G ++  M+NN  W
Sbjct: 67  ILIGGATGTIGDPSGRQSERQLQTLEVVQHNVDALTAQMKKLFDFG-GNSEVKMVNNYDW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
              I  I+ LR+ G  FS+N ML+ + V SRL  +  +SF EF Y ILQA DF  L    
Sbjct: 126 THEINIIEFLRDYGKNFSINSMLAKDIVASRL--DTGISFTEFTYQILQAMDFHHLYTKE 183

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLK--TPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
           D +LQ+GGSDQWGNI  G+DL  +L+    K+F LT PLL  + GTK GK+  GA+WL+ 
Sbjct: 184 DVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSAGGAVWLDP 243

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN--EAKKIIATEIT 307
           E T+P+ F+Q+W N DD DV+ + K  T L    ID +A     E +  EA+K++A E+T
Sbjct: 244 EKTTPFEFYQFWVNTDDRDVIKYLKYFTFLKKERIDELAAKVEVEPHKREAQKVLAEEMT 303

Query: 308 TMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIV 357
             VHG E   +A       F   I S          + MPT   SK+  +    ++  +V
Sbjct: 304 KFVHGEEALLQAEKITAALFSGDIKSLTADEIEQGFKEMPTFHSSKETKN----IVEWLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             G   S  +AR  + + AI +N   +++    + +++      I +  GKKN+ +  L
Sbjct: 360 DLGIEPSRRQAREDINNGAISMNGEKVTDVGTDVTVENSFDGRFIIIRKGKKNYSLVKL 418


>gi|229519851|ref|ZP_04409285.1| tyrosyl-tRNA synthetase [Vibrio cholerae TM 11079-80]
 gi|229343139|gb|EEO08123.1| tyrosyl-tRNA synthetase [Vibrio cholerae TM 11079-80]
          Length = 434

 Score =  254 bits (649), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 163/424 (38%), Positives = 233/424 (54%), Gaps = 27/424 (6%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTA--YIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
           L +RG I Q S P  L+ L  + V     Y G+D TA SLH GHL  L++L   Q  GH+
Sbjct: 18  LQQRGLIAQ-STP--LEALVERFVTPQVLYCGFDPTAGSLHIGHLVPLLMLKRFQNAGHQ 74

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM-LNN 128
            I+L+GG T +IGDPSF+   R +  +Q +Q+ +  +    +  +   +    +LM +NN
Sbjct: 75  AIALIGGATGMIGDPSFKANERVLNSAQTVQQWVSDLSQQITQLMASQSENCASLMTVNN 134

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDFVEL 187
             W+  I  ID  R++G  FSVN M++ ESV+ RL R +Q +SF EF+Y +LQ+YDF  L
Sbjct: 135 ADWIGKINLIDFFRDVGKHFSVNAMINRESVKQRLARPDQGISFTEFSYSLLQSYDFAHL 194

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            + + C LQ+GG+DQWGNI+ GIDL  RL   ++  LT PL+T + GTK GKT SGA+WL
Sbjct: 195 NREFGCALQIGGNDQWGNIVSGIDLTRRLNGAEVCGLTLPLITKSDGTKFGKTESGAVWL 254

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATE 305
               TSPY F+Q+W N DDADV  F    T L  +EI+  R A        +A++I+A  
Sbjct: 255 ESSKTSPYRFYQFWLNSDDADVYRFLAYYTFLSTAEIEEIRQADALRAGKPQAQQILAEH 314

Query: 306 ITTMVHGRE--EAEKAATAAMECFDMSIHS---------QHMPTISISKDEVSRGMGLLT 354
           +T  VHG E   A +  T A+   D+S  S           +P ++       R   LL 
Sbjct: 315 VTRFVHGEEGLAAAQRITQALFSGDVSYLSLSELAQLELDGLPCVA-----ALRSDSLLD 369

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           L++ +G A+S  +AR  L++ AI++N   +  E +      FD      L  GKK   + 
Sbjct: 370 LLLSSGLASSKRQAREWLENGAIRVNGERVQQEGVLSGFALFDRY--YVLQRGKKQFALI 427

Query: 415 HLCG 418
            L G
Sbjct: 428 KLEG 431


>gi|30023099|ref|NP_834730.1| tyrosyl-tRNA synthetase [Bacillus cereus ATCC 14579]
 gi|229130324|ref|ZP_04259283.1| Tyrosyl-tRNA synthetase [Bacillus cereus BDRD-Cer4]
 gi|81433183|sp|Q815S0|SYY2_BACCR RecName: Full=Tyrosyl-tRNA synthetase 2; AltName:
           Full=Tyrosine--tRNA ligase 2; Short=TyrRS 2
 gi|29898659|gb|AAP11931.1| Tyrosyl-tRNA synthetase [Bacillus cereus ATCC 14579]
 gi|228653257|gb|EEL09136.1| Tyrosyl-tRNA synthetase [Bacillus cereus BDRD-Cer4]
          Length = 420

 Score =  254 bits (649), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 148/419 (35%), Positives = 221/419 (52%), Gaps = 21/419 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG ++Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  GH P+
Sbjct: 7   LEWRGAVNQQTDEEGLRKLVEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLAGHHPV 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+GG T  IGDPS R   R++   + +Q N++ +         +G G ++  M+NN  W
Sbjct: 67  ILIGGATGTIGDPSGRQSERQLQTLEVVQHNVDALTAQMKKLFDFG-GNSEVKMVNNYDW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
              I  I+ LR+ G  FS+N ML+ + V SRL  +  +SF EF Y ILQA DF  L    
Sbjct: 126 THEINIIEFLRDYGKNFSINSMLAKDIVASRL--DTGISFTEFTYQILQAMDFHHLYTKE 183

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLK--TPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
           D +LQ+GGSDQWGNI  G+DL  +L+    K+F LT PLL  + GTK GK+  GA+WL+ 
Sbjct: 184 DVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSAGGAVWLDP 243

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN--EAKKIIATEIT 307
           E T+P+ F+Q+W N DD DV+ + K  T L    ID +A     E +  EA+K++A E+T
Sbjct: 244 EKTTPFEFYQFWVNTDDRDVIKYLKYFTFLTKERIDELATKVEVEPHKREAQKVLAEEMT 303

Query: 308 TMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIV 357
             VHG E   +A       F   I S          + MPT   SK+  +    ++  +V
Sbjct: 304 KFVHGEEAFLQAEKITAALFSGDIKSLTADEIEQGFKEMPTFQSSKETKN----IVEWLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             G   S  +AR  + + AI +N   +++    + +++      I +  GKKN+ +  L
Sbjct: 360 DLGIEPSRRQAREDINNGAISMNGEKVTDVGTDVTVENSFDGRFIIIRKGKKNYSLVKL 418


>gi|153807144|ref|ZP_01959812.1| hypothetical protein BACCAC_01421 [Bacteroides caccae ATCC 43185]
 gi|149130264|gb|EDM21474.1| hypothetical protein BACCAC_01421 [Bacteroides caccae ATCC 43185]
          Length = 430

 Score =  254 bits (649), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 148/427 (34%), Positives = 229/427 (53%), Gaps = 22/427 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG +  I    E  ++  Q  VTAY+G D TA SLH GHL  +M+L   Q+ 
Sbjct: 2   NFVEELRWRGMLQDIMPGTEELLIKEQ--VTAYLGIDPTADSLHIGHLCGVMILRHFQRC 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD-ALM 125
           GHKP++L+GG T +IGDPS +   R ++  + ++ N   IK   + F+ + +   + A +
Sbjct: 60  GHKPLALIGGATGMIGDPSGKSAERNLLDEETLRHNQACIKNQLAKFLDFESDVPNRAEL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQAYD 183
           +NN  W+    ++D +RE+G   +VN M++ +SV+ RL  E    LSF EF Y +LQ YD
Sbjct: 120 VNNYDWMKDFTFLDFVREVGKHITVNYMMAKDSVKRRLNGEARDGLSFTEFTYQLLQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ L +   C+LQMGGSDQWGNI  G +L  R    ++FALT PL+T A G K GKT SG
Sbjct: 180 FLHLYETKGCKLQMGGSDQWGNITTGAELIRRTNGGEVFALTCPLITKADGGKFGKTESG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM-AKLQ-GKEINEAKKI 301
            IWL+   TSPY F+Q+W N+ D+D   + K  T++   EI+ + A+ Q    +   +K 
Sbjct: 240 NIWLDPRYTSPYKFYQFWLNVSDSDAERYIKIFTSIEKEEIEALIAEHQAAPHLRILQKR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDEVS 347
           +A E+T MVH  ++   A  A+   F  +                 + +P   IS+D ++
Sbjct: 300 LAKEVTVMVHSEDDYNAAVDASNILFGNATSEALRKLDEDTLLAVFEGVPQFEISRDALT 359

Query: 348 RGMGLLTLIV-KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+  + L V  A    S  E R+ ++   + +N   ++     I   D      + +  
Sbjct: 360 GGVKAVDLFVDNAAVFASKGEMRKLVQGGGVSLNKEKLAAFDQVITAADLLDEKYLLVQR 419

Query: 407 GKKNHII 413
           GKKN+ +
Sbjct: 420 GKKNYYL 426


>gi|228923799|ref|ZP_04087077.1| Tyrosyl-tRNA synthetase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228835928|gb|EEM81291.1| Tyrosyl-tRNA synthetase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
          Length = 419

 Score =  254 bits (649), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 149/419 (35%), Positives = 220/419 (52%), Gaps = 21/419 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG ++Q ++   L  L     ++ Y G D T  S+H GHL   M++   Q  GH P+
Sbjct: 7   LEWRGAVNQQTDEEGLRKLVEGKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLAGHHPV 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+GG T  IGDPS R   R++   + +Q N++ +         +G G ++  M+NN  W
Sbjct: 67  ILIGGATGTIGDPSGRQSERQLQTLEVVQHNVDALTAQMKKLFDFG-GNSEVKMVNNYDW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
              I  I+ LR+ G  FS+N ML+ + V SRL  +  +SF EF Y ILQA DF  L    
Sbjct: 126 THEINIIEFLRDYGKNFSINSMLAKDIVASRL--DTGISFTEFTYQILQAMDFHHLYTKE 183

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLK--TPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
           D +LQ+GGSDQWGNI  G+DL  +L+    K+F LT PLL  + GTK GK+  GA+WL+ 
Sbjct: 184 DVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSAGGAVWLDP 243

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN--EAKKIIATEIT 307
           E T+P+ F+Q+W N DD DVV + K  T L    ID +A     E +  EA+K++A E+T
Sbjct: 244 EKTTPFEFYQFWVNTDDRDVVKYLKYFTFLTKERIDELAARVEAEPHKREAQKVLAEEMT 303

Query: 308 TMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIV 357
             VHG E   +A       F   I S          + MPT   SK+  +    ++  +V
Sbjct: 304 KFVHGEEAFLQAEKITAALFSGDIKSLTADEIEQGFKEMPTFQSSKETKN----IVEWLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             G   S  +AR  + + AI +N   +++    + +++      I +  GKKN+ +  L
Sbjct: 360 DLGIEPSRRQAREDINNGAISMNGEKVTDVGTDVTVENSFDGRFIIIRKGKKNYSLVKL 418


>gi|145295540|ref|YP_001138361.1| tyrosyl-tRNA synthetase [Corynebacterium glutamicum R]
 gi|140845460|dbj|BAF54459.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 420

 Score =  254 bits (649), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 150/419 (35%), Positives = 229/419 (54%), Gaps = 17/419 (4%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           LS RG I+Q ++   L    S   +T Y G+D T  SLHAGHL  L++L   Q+ GH PI
Sbjct: 7   LSWRGLINQSTDLEALREEAST-PITLYCGFDPTGPSLHAGHLVPLLMLRRFQQAGHNPI 65

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQE-IQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
            L GG T +IGDP  RD   R M S + +    E+I G  S F+ +  G+  A ++NN  
Sbjct: 66  VLAGGATGMIGDP--RDVGERTMNSADTVSVWAERISGQLSRFVDF-DGEHAARLVNNAE 122

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           W   +  +  LR++G  FS+N ML+ ++V+ RL+ +  +S+ EF+YM+LQA D+VEL K 
Sbjct: 123 WTNEMSVVTFLRDVGKHFSLNTMLARDTVKRRLESD-GISYTEFSYMLLQANDYVELNKR 181

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK-TLSGAIWLNK 249
           + C LQ+GG DQWGNI+ G+DL  R+    + A+T PL+T + G K GK T  G++WL+ 
Sbjct: 182 FGCTLQVGGGDQWGNIVSGVDLNRRVNGTSVHAVTVPLVTDSDGKKFGKSTGGGSLWLDP 241

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIATEIT 307
           EMTSPY ++QY+ N  DADV+ + +  T L   E+  +     +     EA++ +A E+T
Sbjct: 242 EMTSPYAWYQYFINASDADVIRYLRWFTFLTQEELAELEVEVAERPFKREAQRRLAREMT 301

Query: 308 TMVHGREEAEKAATAAMECF--------DMSIHSQHMPTISISKDEVSRGMGLLTLIVKA 359
            +VHG E  E    AA   F        D    +  +   ++++ +      ++ L+V +
Sbjct: 302 NLVHGTEATEAVELAAQALFGRAELRDLDEKTLAASVSETAVAEIKAGEPRTIIDLLVAS 361

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLCG 418
           G A S   A+R +K     +NN  I ++  +   +D      + L  GKKN     + G
Sbjct: 362 GLADSKGAAKRAVKEGGAYVNNERIESDDWEPSAEDLLHGSWLVLRRGKKNFAGVQILG 420


>gi|296129499|ref|YP_003636749.1| tyrosyl-tRNA synthetase [Cellulomonas flavigena DSM 20109]
 gi|296021314|gb|ADG74550.1| tyrosyl-tRNA synthetase [Cellulomonas flavigena DSM 20109]
          Length = 427

 Score =  254 bits (649), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 138/400 (34%), Positives = 220/400 (55%), Gaps = 12/400 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +D L  L+ RG + Q ++   L    + G V+ Y G+D TA SLH G+L Q++ +  LQ 
Sbjct: 2   TDILDELAWRGLLSQHTDLDALRTEMAAGPVSLYCGFDPTAPSLHIGNLVQILTVRRLQD 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN-IEKIKGIFSSFIKYGTGKTDAL 124
            GH+P +L+GG T +IGDP    E  R + S ++    +E+I+G  +  +++  G   A 
Sbjct: 62  AGHRPFALVGGATGLIGDPKMTGE--RTLNSPDVVAGWVERIRGQIAPLLRF-DGPNAAT 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M+NN  W   +  ID LR++G  + +  ML+ ++V  RL  EQ +SF EF+Y ILQ  DF
Sbjct: 119 MVNNLDWTAGMSAIDFLRDVGKHYRLGTMLAKDTVARRLNSEQGISFTEFSYQILQGMDF 178

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL + +   LQ GG+DQWGN++ G++L  +++   + A+T+PL+T A GTK GKT SG 
Sbjct: 179 LELYRRHGVHLQTGGNDQWGNLLSGVELVRKVEGVPVHAITTPLITKADGTKFGKTESGT 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKKII 302
           +WL+  MT+PY F+Q+W N DDADV  + K  T     EI  +  A  Q     EA++ +
Sbjct: 239 VWLDPAMTTPYAFYQFWLNADDADVAGYLKVFTFRTREEIATLEEAVAQRPAAREAQRAL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMS-IHSQHMPTISISKDEVSRGMG-----LLTLI 356
           A ++T +VHG + A+    A+   F    + +    T++ +  E+    G     L+ L 
Sbjct: 299 AYDVTALVHGTDAADAVVAASQALFGRGELGALDEATLAAAVAELPTAPGRAGDVLVDLF 358

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
              G   S   ARR +      +NN  ++ +   +  +D 
Sbjct: 359 AATGVVASKAAARRAIAEGGASVNNVRVTEDGATLGAEDL 398


>gi|229099524|ref|ZP_04230452.1| Tyrosyl-tRNA synthetase [Bacillus cereus Rock3-29]
 gi|228683820|gb|EEL37770.1| Tyrosyl-tRNA synthetase [Bacillus cereus Rock3-29]
          Length = 419

 Score =  254 bits (649), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 148/419 (35%), Positives = 220/419 (52%), Gaps = 21/419 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG ++Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  GH P+
Sbjct: 7   LEWRGAVNQQTDEEGLRKLVEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLAGHHPV 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+GG T  IGDPS R   R++   + +Q N++ +         +G G ++  M+NN  W
Sbjct: 67  ILIGGATGTIGDPSGRQSERQLQTLEVVQHNVDALTAQMKKLFDFG-GNSEVKMVNNYDW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
              I  I+ LR  G  FS+N ML+ + V SRL  +  +SF EF Y ILQA DF  L    
Sbjct: 126 THEINIIEFLRNYGKNFSINSMLAKDIVASRL--DTGISFTEFTYQILQAMDFHHLYTKE 183

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLK--TPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
           D +LQ+GGSDQWGNI  G+DL  +L+    K+F LT PLL  + GTK GK+ SGA+WL+ 
Sbjct: 184 DVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSASGAVWLDA 243

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN--EAKKIIATEIT 307
           E T+P+ F+Q+W N DD DV+ + K  T L    ID +A     E +  EA+K++  E+T
Sbjct: 244 EKTTPFEFYQFWVNTDDRDVIKYLKYFTFLAKERIDELATKVEAEPHKREAQKVLGEEMT 303

Query: 308 TMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIV 357
             VHG E   +A       F   I S          + MPT   SK+  +    ++  +V
Sbjct: 304 KFVHGEEALLQAVKITSALFSGDIKSLTADEIEQGFKEMPTFQSSKETKN----IVEWLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             G   S  +AR  + + AI +N   +++    + +++      I +  GKKN+ +  L
Sbjct: 360 DLGIEPSRRQAREDINNGAISMNGEKVTDVGTDVTVENSFDGRFIIIRKGKKNYSLVKL 418


>gi|229118589|ref|ZP_04247941.1| Tyrosyl-tRNA synthetase [Bacillus cereus Rock1-3]
 gi|228664781|gb|EEL20271.1| Tyrosyl-tRNA synthetase [Bacillus cereus Rock1-3]
          Length = 419

 Score =  254 bits (649), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 147/419 (35%), Positives = 221/419 (52%), Gaps = 21/419 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG ++Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  GH P+
Sbjct: 7   LEWRGAVNQQTDEEGLRKLVEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLAGHHPV 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+GG T  IGDPS R   R++   + +Q N++ +         +G G ++  M+NN  W
Sbjct: 67  ILIGGATGTIGDPSGRQSERQLQTLEVVQHNVDALTAQMKKLFDFG-GNSEVKMVNNYDW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
              I  I+ LR+ G  FS+N ML+ + V SRL  +  +SF EF Y ILQA DF  L    
Sbjct: 126 THEINIIEFLRDYGKNFSINSMLAKDIVASRL--DTGISFTEFTYQILQAMDFHHLYTKE 183

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLK--TPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
           D +LQ+GGSDQWGNI  G+DL  +L+    K+F LT PLL  + GTK GK+ SGA+WL+ 
Sbjct: 184 DVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSASGAVWLDA 243

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN--EAKKIIATEIT 307
           E T+P+ F+Q+W N DD DV+ + K  T L    ID +A     E +  EA+K++  E+T
Sbjct: 244 EKTTPFEFYQFWVNTDDRDVIKYLKYFTFLAKERIDELATKVEAEPHKREAQKVLGEEMT 303

Query: 308 TMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIV 357
             VHG E   +A       F   I S          + MPT   SK+  +    ++  +V
Sbjct: 304 KFVHGEEALLQAVKITSALFSGDIKSLTADEIEQGFKEMPTFQSSKETKN----IVEWLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             G   S  +AR  + + AI +N   +++    + +++      I +  G+KN+ +  L
Sbjct: 360 DLGIEPSRRQAREDINNGAISMNGEKVTDVGTDVTVENSFDGRFIIIRKGRKNYSLVKL 418


>gi|75760562|ref|ZP_00740596.1| Tyrosyl-tRNA synthetase [Bacillus thuringiensis serovar israelensis
           ATCC 35646]
 gi|74491958|gb|EAO55140.1| Tyrosyl-tRNA synthetase [Bacillus thuringiensis serovar israelensis
           ATCC 35646]
          Length = 420

 Score =  254 bits (649), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 148/419 (35%), Positives = 221/419 (52%), Gaps = 21/419 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG ++Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  GH P+
Sbjct: 7   LEWRGAVNQQTDEEGLRKLVEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLAGHHPV 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+GG T  IGDPS R   R++   + +Q N++ +         +G G ++  M+NN  W
Sbjct: 67  ILIGGATGTIGDPSGRQSERQLQTLEVVQHNVDALTAQMKKLFDFG-GNSEVKMVNNYXW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
              I  I+ LR+ G  FS+N ML+ + V SRL  +  +SF EF Y ILQA DF  L    
Sbjct: 126 THEINIIEFLRDYGKNFSINSMLAKDIVASRL--DTGISFTEFTYQILQAMDFHHLYTKE 183

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLK--TPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
           D +LQ+GGSDQWGNI  G+DL  +L+    K+F LT PLL  + GTK GK+  GA+WL+ 
Sbjct: 184 DVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSAGGAVWLDP 243

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN--EAKKIIATEIT 307
           E T+P+ F+Q+W N DD DV+ + K  T L    ID +A     E +  EA+K++A E+T
Sbjct: 244 EKTTPFEFYQFWVNTDDRDVIKYLKYFTFLKKERIDELAAKVEVEPHKREAQKVLAEEMT 303

Query: 308 TMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIV 357
             VHG E   +A       F   I S          + MPT   SK+  +    ++  +V
Sbjct: 304 KFVHGEEALLQAEKITAALFSGDIKSLTADEIEQGFKEMPTFHSSKETKN----IVEWLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             G   S  +AR  + + AI +N   +++    + +++      I +  GKKN+ +  L
Sbjct: 360 DLGIEPSRRQAREDINNGAISMNGEKVTDVGTDVTVENSFDGRFIIIRKGKKNYSLVKL 418


>gi|290968254|ref|ZP_06559797.1| tyrosine--tRNA ligase [Megasphaera genomosp. type_1 str. 28L]
 gi|290781736|gb|EFD94321.1| tyrosine--tRNA ligase [Megasphaera genomosp. type_1 str. 28L]
          Length = 418

 Score =  254 bits (648), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 145/384 (37%), Positives = 208/384 (54%), Gaps = 25/384 (6%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L+ RG I+Q+++   L  L  +  ++ Y G D T  S+H GHL   M+L      GH P+
Sbjct: 7   LTWRGAINQMTDEAGLRKLTEEKKISLYCGVDPTGDSMHIGHLIPFMMLKRFAAAGHHPV 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL-MLNNET 130
            L+GGGT  IGDPS R   R++   +++Q N  K++  F+       G+ D +  +NN  
Sbjct: 67  VLIGGGTGAIGDPSGRKTERQLQTMEKVQANAAKLRAQFAHLF----GEEDRITFVNNAD 122

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           WL  I  +  LR+ G  FSVN ML+ + V SRL  +  +SF EF Y ILQ+ DF  L   
Sbjct: 123 WLSKIDVLTFLRDYGKLFSVNVMLAKDVVASRL--DAGISFTEFTYQILQSMDFEHLFST 180

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERL--KTPKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
           Y  +LQ+GG+DQWGNI  G D   ++   T + + LT PL+  A GTK GKT  GA+WL+
Sbjct: 181 YHVQLQIGGADQWGNITAGTDTIRKIHGSTAEAYGLTIPLMLKADGTKFGKTAGGAVWLD 240

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATEI 306
            E TSP+ F+Q+W N DDADVV + K  T L   EI+ +A+   KE  +  A++ +A E+
Sbjct: 241 PEKTSPFEFYQFWLNQDDADVVKYLKYFTFLGQEEINALAEAVQKEPEKRAAQRRLAEEV 300

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLI 356
           T  VH +E   +A       F  SI             +MPT+ +S  E      ++  +
Sbjct: 301 TVFVHSKEALAEAQRITEALFHGSIEELSERELLQAFGNMPTVEVSATEKD----VVNWL 356

Query: 357 VKAGFATSTNEARRHLKSNAIKIN 380
           V AG  TS  +AR  +   A+ IN
Sbjct: 357 VDAGIYTSKRQAREDVAHGAVTIN 380


>gi|225155936|ref|ZP_03724420.1| Tyrosine--tRNA ligase [Opitutaceae bacterium TAV2]
 gi|224803289|gb|EEG21528.1| Tyrosine--tRNA ligase [Opitutaceae bacterium TAV2]
          Length = 433

 Score =  254 bits (648), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 141/423 (33%), Positives = 219/423 (51%), Gaps = 21/423 (4%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG +   ++   L    ++G VT YIG+D T  SLH GHL   + L   Q  GH+ +
Sbjct: 7   LQWRGLLADCTDLDALAKRLNEGPVTLYIGFDPTGDSLHVGHLMGQLTLRRFQLAGHRVL 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD--ALMLNNE 129
            L GG T +IGDPS +   R ++  +++  N+ +IK   S  + +    T   A +++N 
Sbjct: 67  PLAGGATGMIGDPSGKSAERNLLTPEQLAHNVARIKQQLSRLLDFDPAHTPNPARLVDNA 126

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
            W   I ++D LR++G  FS+N ML+ +SVRSR++ +  +S+ EF+Y +LQA+DF  L +
Sbjct: 127 DWTRGISFLDFLRDVGKHFSLNVMLAKDSVRSRMEGDTGISYTEFSYQLLQAHDFYILRR 186

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
           ++ C LQ+GGSDQWGNI  G+D   R      +  T PL+T A G+K GKT  GA+WL+ 
Sbjct: 187 DHGCELQIGGSDQWGNITAGVDFIRRKLGVPAYGWTFPLITKADGSKFGKTEGGAVWLDP 246

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE--INEAKKIIATEIT 307
           E TSPY F+Q++ N +DA V  + ++ T L   EI+ +           EA + +A EIT
Sbjct: 247 EKTSPYKFYQFFVNTEDAKVCEYLRKFTFLGRPEIEELEAKHAANPGAREAHRALAREIT 306

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQ----------HMPT-------ISISKDEVSRGM 350
             VHG+   + A  A+   F   I              +PT       +  + D    G 
Sbjct: 307 RTVHGQAALDAALKASDILFGAEIGDTTESTFRDVVGEVPTKPLERIRLETTPDAGVAGA 366

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            L  L+V AG A S  +AR+ ++   + +NN  +      +   D      + L  GK+ 
Sbjct: 367 PLTELLVHAGLAPSKGQARKDIEGGGVYLNNVRVGESARMVTPADLLFGKYLLLRKGKRT 426

Query: 411 HII 413
           + +
Sbjct: 427 YAV 429


>gi|229105682|ref|ZP_04236313.1| Tyrosyl-tRNA synthetase [Bacillus cereus Rock3-28]
 gi|228677730|gb|EEL31976.1| Tyrosyl-tRNA synthetase [Bacillus cereus Rock3-28]
          Length = 419

 Score =  254 bits (648), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 147/419 (35%), Positives = 220/419 (52%), Gaps = 21/419 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG ++Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  GH P+
Sbjct: 7   LEWRGAVNQQTDEEGLRKLVEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLAGHHPV 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+GG T  IGDPS R   R++   + +Q N++ +         +G G ++  M+NN  W
Sbjct: 67  ILIGGATGTIGDPSGRQSERQLQTLEVVQHNVDALTAQMKKLFDFG-GNSEVKMVNNYDW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
              I  I+ LR+ G  FS+N ML+ + V SRL  +  +SF EF Y ILQA DF  L    
Sbjct: 126 THEINIIEFLRDYGKNFSINSMLAKDIVASRL--DTGISFTEFTYQILQAMDFHHLYTKE 183

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLK--TPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
           D +LQ+GGSDQWGNI  G+DL  +L+    K+F LT PLL  + GTK GK+  GA+WL+ 
Sbjct: 184 DVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSAGGAVWLDA 243

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN--EAKKIIATEIT 307
           E T+P+ F+Q+W N DD DV+ + K  T L    ID +A     E +  EA+K++  E+T
Sbjct: 244 EKTTPFEFYQFWVNTDDRDVIKYLKYFTFLAKERIDELATKVEAEPHKREAQKVLGEEMT 303

Query: 308 TMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIV 357
             VHG E   +A       F   I S          + MPT   SK+  +    ++  +V
Sbjct: 304 KFVHGEEALLQAVKITSALFSGDIKSLTADEIEQGFKEMPTFQSSKETKN----IVEWLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             G   S  +AR  + + AI +N   +++    + +++      I +  GKKN+ +  L
Sbjct: 360 DLGIEPSRRQAREDINNGAISMNGEKVTDVGTDVTVENSFDGKFIIIRKGKKNYSLVKL 418


>gi|15640492|ref|NP_230119.1| tyrosyl-tRNA synthetase [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|121590714|ref|ZP_01678046.1| tyrosyl-tRNA synthetase [Vibrio cholerae 2740-80]
 gi|153819164|ref|ZP_01971831.1| tyrosyl-tRNA synthetase [Vibrio cholerae NCTC 8457]
 gi|153823181|ref|ZP_01975848.1| tyrosyl-tRNA synthetase [Vibrio cholerae B33]
 gi|227080675|ref|YP_002809226.1| tyrosyl-tRNA synthetase [Vibrio cholerae M66-2]
 gi|229507103|ref|ZP_04396609.1| tyrosyl-tRNA synthetase [Vibrio cholerae BX 330286]
 gi|229509061|ref|ZP_04398549.1| tyrosyl-tRNA synthetase [Vibrio cholerae B33]
 gi|229519729|ref|ZP_04409172.1| tyrosyl-tRNA synthetase [Vibrio cholerae RC9]
 gi|229606242|ref|YP_002876890.1| tyrosyl-tRNA synthetase [Vibrio cholerae MJ-1236]
 gi|254850696|ref|ZP_05240046.1| tyrosyl-tRNA synthetase [Vibrio cholerae MO10]
 gi|298501004|ref|ZP_07010805.1| tyrosyl-tRNA synthetase [Vibrio cholerae MAK 757]
 gi|9654891|gb|AAF93638.1| tyrosyl-tRNA synthetase [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|121547445|gb|EAX57554.1| tyrosyl-tRNA synthetase [Vibrio cholerae 2740-80]
 gi|126510309|gb|EAZ72903.1| tyrosyl-tRNA synthetase [Vibrio cholerae NCTC 8457]
 gi|126519307|gb|EAZ76530.1| tyrosyl-tRNA synthetase [Vibrio cholerae B33]
 gi|227008563|gb|ACP04775.1| tyrosyl-tRNA synthetase [Vibrio cholerae M66-2]
 gi|229344418|gb|EEO09393.1| tyrosyl-tRNA synthetase [Vibrio cholerae RC9]
 gi|229353986|gb|EEO18920.1| tyrosyl-tRNA synthetase [Vibrio cholerae B33]
 gi|229355848|gb|EEO20768.1| tyrosyl-tRNA synthetase [Vibrio cholerae BX 330286]
 gi|229368897|gb|ACQ59320.1| tyrosyl-tRNA synthetase [Vibrio cholerae MJ-1236]
 gi|254846401|gb|EET24815.1| tyrosyl-tRNA synthetase [Vibrio cholerae MO10]
 gi|297540252|gb|EFH76312.1| tyrosyl-tRNA synthetase [Vibrio cholerae MAK 757]
          Length = 434

 Score =  254 bits (648), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 152/391 (38%), Positives = 220/391 (56%), Gaps = 21/391 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG I Q S P E  +         Y G+D TA SLH GHL  L++L   Q  GH+ I
Sbjct: 18  LQQRGLIAQ-STPLEALVERFATPQVLYCGFDPTAGSLHIGHLVPLLMLKRFQNAGHQAI 76

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM-LNNET 130
           +L+GG T +IGDPSF+   R +  +Q +Q+ +  +    +  +        +LM +NN  
Sbjct: 77  ALIGGATGMIGDPSFKANERVLNSAQTVQQWVSDLSQQITQLMTSQGENCASLMAVNNAD 136

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDFVELAK 189
           W+  I  ID  R++G  FSVN M++ ESV+ RL R +Q +SF EF+Y +LQ+YDF  L +
Sbjct: 137 WIGKINLIDFFRDVGKHFSVNAMINRESVKQRLARPDQGISFTEFSYSLLQSYDFAHLNR 196

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
            + C LQ+GG+DQWGNI+ GIDL  RL   ++  LT PL+T + GTK GKT SGA+WL  
Sbjct: 197 EFGCALQIGGNDQWGNIVSGIDLTRRLNGVEVCGLTLPLITKSDGTKFGKTESGAVWLES 256

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEIT 307
             TSPY F+Q+W N DDADV  F    T L  +EI+  R A        +A++I+A  +T
Sbjct: 257 SKTSPYRFYQFWLNSDDADVYRFLAYYTFLSTAEIEEIRQADALRAGKPQAQQILAEHVT 316

Query: 308 TMVHGRE--EAEKAATAAMECFDMSIHS---------QHMPTISISKDEVSRGMGLLTLI 356
             VHG E   A +  T A+   D+S  S           +P ++ S+ +       L L+
Sbjct: 317 RFVHGEEGLAAAQRITQALFSGDVSYLSLSELAQLELDGLPCVAASRTDSL-----LDLL 371

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNE 387
           + +G A+S  +AR  L++ AI++N   +  E
Sbjct: 372 LSSGLASSKRQAREWLENGAIRVNGERVQQE 402


>gi|255744288|ref|ZP_05418241.1| tyrosyl-tRNA synthetase [Vibrio cholera CIRS 101]
 gi|262147287|ref|ZP_06028086.1| tyrosyl-tRNA synthetase [Vibrio cholerae INDRE 91/1]
 gi|97202332|sp|Q9KUQ0|SYY1_VIBCH RecName: Full=Tyrosyl-tRNA synthetase 1; AltName:
           Full=Tyrosine--tRNA ligase 1; Short=TyrRS 1
 gi|255738228|gb|EET93620.1| tyrosyl-tRNA synthetase [Vibrio cholera CIRS 101]
 gi|262031281|gb|EEY49896.1| tyrosyl-tRNA synthetase [Vibrio cholerae INDRE 91/1]
          Length = 426

 Score =  254 bits (648), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 152/391 (38%), Positives = 220/391 (56%), Gaps = 21/391 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG I Q S P E  +         Y G+D TA SLH GHL  L++L   Q  GH+ I
Sbjct: 10  LQQRGLIAQ-STPLEALVERFATPQVLYCGFDPTAGSLHIGHLVPLLMLKRFQNAGHQAI 68

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM-LNNET 130
           +L+GG T +IGDPSF+   R +  +Q +Q+ +  +    +  +        +LM +NN  
Sbjct: 69  ALIGGATGMIGDPSFKANERVLNSAQTVQQWVSDLSQQITQLMTSQGENCASLMAVNNAD 128

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDFVELAK 189
           W+  I  ID  R++G  FSVN M++ ESV+ RL R +Q +SF EF+Y +LQ+YDF  L +
Sbjct: 129 WIGKINLIDFFRDVGKHFSVNAMINRESVKQRLARPDQGISFTEFSYSLLQSYDFAHLNR 188

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
            + C LQ+GG+DQWGNI+ GIDL  RL   ++  LT PL+T + GTK GKT SGA+WL  
Sbjct: 189 EFGCALQIGGNDQWGNIVSGIDLTRRLNGVEVCGLTLPLITKSDGTKFGKTESGAVWLES 248

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEIT 307
             TSPY F+Q+W N DDADV  F    T L  +EI+  R A        +A++I+A  +T
Sbjct: 249 SKTSPYRFYQFWLNSDDADVYRFLAYYTFLSTAEIEEIRQADALRAGKPQAQQILAEHVT 308

Query: 308 TMVHGRE--EAEKAATAAMECFDMSIHS---------QHMPTISISKDEVSRGMGLLTLI 356
             VHG E   A +  T A+   D+S  S           +P ++ S+ +       L L+
Sbjct: 309 RFVHGEEGLAAAQRITQALFSGDVSYLSLSELAQLELDGLPCVAASRTDSL-----LDLL 363

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNE 387
           + +G A+S  +AR  L++ AI++N   +  E
Sbjct: 364 LSSGLASSKRQAREWLENGAIRVNGERVQQE 394


>gi|154509115|ref|ZP_02044757.1| hypothetical protein ACTODO_01634 [Actinomyces odontolyticus ATCC
           17982]
 gi|153798749|gb|EDN81169.1| hypothetical protein ACTODO_01634 [Actinomyces odontolyticus ATCC
           17982]
          Length = 420

 Score =  253 bits (647), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 147/422 (34%), Positives = 232/422 (54%), Gaps = 13/422 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +D L  L  RG + Q ++   L    + G VT Y GYD TA SLH GHL QL+++  LQ 
Sbjct: 2   TDILDELQWRGLLAQHTDLEALREHLNAGPVTFYCGYDPTAPSLHHGHLVQLIVMRHLQL 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN-IEKIKGIFSSFIKYGTGKTDAL 124
            GH+P++L+GG T  IGDP  R    R ++S E+ +   +++    S F+ +  G   A 
Sbjct: 62  AGHRPLALVGGATGQIGDP--RQSGERQLQSTEVVKGWADRLHSQISKFLDF-EGPAAAT 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M+NN  W   +  IDLLR IG +F V  ML+ + V  R+  ++ +S+ EF+Y +LQA DF
Sbjct: 119 MVNNLDWTQEMSAIDLLRTIGKYFRVGTMLNKDIVARRIASDEGISYTEFSYQVLQANDF 178

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL +   C L+ GG+DQWGN++ G+DL  +++      +T+P++T A GTK GK+  GA
Sbjct: 179 LELYRRNGCTLETGGNDQWGNMVGGVDLIRKVEGVDTHVMTTPIITKADGTKFGKSEGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKII 302
           IWL+ EM +PY F+Q+W  + D DVV F K  T     EI+ +A    +  ++  A+K +
Sbjct: 239 IWLDPEMMTPYAFYQFWLQVADDDVVRFLKIFTFKSREEIEALAVEVAERPHQRAAQKAL 298

Query: 303 ATEITTMVHGREEAEK--AATAAM----ECFDMSIHSQHMPTISISKDEVSRGMGLLT-L 355
           A  +T +VHG ++ E+  AAT A+    +  D+   +    T  + +  ++ G   +   
Sbjct: 299 AASVTELVHGADQLERVLAATDALWGGGDIRDLDEATLAAATADLPRASLTVGESTVADA 358

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            V  GF      ARR + S    INN  + + +  ++ +D  + G   +  G+KN  +  
Sbjct: 359 FVALGFEKGKTAARRTISSGGASINNVKVEDPEAVLREEDVLAGGLALIRKGRKNLAVLE 418

Query: 416 LC 417
           L 
Sbjct: 419 LS 420


>gi|256847595|ref|ZP_05553040.1| tyrosyl-tRNA synthetase [Lactobacillus coleohominis 101-4-CHN]
 gi|256715284|gb|EEU30260.1| tyrosyl-tRNA synthetase [Lactobacillus coleohominis 101-4-CHN]
          Length = 416

 Score =  253 bits (647), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 158/430 (36%), Positives = 229/430 (53%), Gaps = 35/430 (8%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D L  L  RG I+Q ++   L  L     ++ Y G D T  SLH GHL   ++L   Q  
Sbjct: 2   DILEDLKWRGAINQCTDLDGLRELLKTKKISLYCGTDPTGDSLHIGHLIPFIMLKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKI-KGIFSSFIKYGTGKTDALM 125
           GH P  L+GGGT  IGDPS R   R++  S ++Q N E + K +   F     G  +  +
Sbjct: 62  GHHPYILIGGGTGFIGDPSGRKTERQLQTSDQVQHNKEALTKQMIKLF-----GTENFKI 116

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           ++N  WL  I  +D LR+ G  F+VN MLS E+V SRLK    +SF EF+Y ILQ+ DF+
Sbjct: 117 VDNYDWLSKISLLDFLRDYGKSFNVNTMLSKEAVASRLKN--GISFTEFSYQILQSVDFL 174

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASGTKMGKTLSGA 244
            L    D +LQ+GG+DQWGN+  G+DL    K   K F LT PL+  A GTK GKT  GA
Sbjct: 175 YLNNTEDIQLQIGGADQWGNLTNGVDLIHSKKPNEKAFGLTIPLMLKADGTKFGKTAGGA 234

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN--EAKKII 302
           +WL+ + TSP+ F+Q+W N DD DVV + K  T L   EID +A+    E    EA++ +
Sbjct: 235 VWLDAKKTSPFEFYQFWLNQDDRDVVKYLKYFTFLSHEEIDDLAEKVKTEPQKREAQRRL 294

Query: 303 ATEITTMVHGREEAEKAATAAMECF-----DMSIHS-----QHMPTISISKDEVSRGMGL 352
           A E+T  VHG E  ++A   +   F     D+S+       + +P++ IS    S+ + +
Sbjct: 295 AEEVTKFVHGEEAMKQAEKMSNILFKGDIQDLSVEELKQAFEKVPSVEIS----SKPVNV 350

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF-----G 407
           +  +V+     S  +AR  + + AI IN   IS+E   +     D + N    +     G
Sbjct: 351 IDWLVQIEIEPSKRQAREDVNNGAITINGQKISDESFVV-----DPSTNFDGQYVVARKG 405

Query: 408 KKNHIICHLC 417
           K+N+ +  + 
Sbjct: 406 KRNYFLAKVT 415


>gi|294636385|ref|ZP_06714772.1| tyrosine--tRNA ligase [Edwardsiella tarda ATCC 23685]
 gi|291090343|gb|EFE22904.1| tyrosine--tRNA ligase [Edwardsiella tarda ATCC 23685]
          Length = 281

 Score =  253 bits (647), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 121/273 (44%), Positives = 170/273 (62%), Gaps = 1/273 (0%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q 
Sbjct: 8   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQL 67

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +Q  +EKI+   + F+ +  G   A+ 
Sbjct: 68  AGHKPVALVGGATGLIGDPSFKASERKLNTEETVQGWVEKIRHQVAPFLDFDCGANSAIA 127

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYDF 184
            NN  W   +  +  LR+IG  FSVN+M++ E+V+ RL R+   +SF EF+Y +LQ YDF
Sbjct: 128 ANNYDWFGGMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDVGISFTEFSYNLLQGYDF 187

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L + +   LQ+GGSDQWGNI  GIDL  RL   +++ LT PL+T A GTK GKT  GA
Sbjct: 188 ASLNRMHGVELQIGGSDQWGNITSGIDLTRRLNQQQVWGLTVPLITKADGTKFGKTEGGA 247

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT 277
           +WL+ + TSPY F+Q+W N  DADV  F K  T
Sbjct: 248 VWLDPKKTSPYKFYQFWINTSDADVYRFLKFFT 280


>gi|295398237|ref|ZP_06808283.1| tyrosine--tRNA ligase [Aerococcus viridans ATCC 11563]
 gi|294973587|gb|EFG49368.1| tyrosine--tRNA ligase [Aerococcus viridans ATCC 11563]
          Length = 421

 Score =  253 bits (647), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 155/422 (36%), Positives = 222/422 (52%), Gaps = 23/422 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I+Q ++   L        ++ Y G D T  SLH GHL   M+L   Q  GH+P+
Sbjct: 7   LEWRGAINQQTDEDGLKAYIKDNKISLYCGVDPTGDSLHIGHLIPFMVLKRFQLAGHRPV 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSS-FIKYGTGKTDALMLNNET 130
            L+GG T  IGDPS + E R +   ++++EN  K+     + F+K      D  M+NN  
Sbjct: 67  ILIGGATGSIGDPSGKSEERNLQSMEQVEENARKLASQMENLFLK--EKDADFRMVNNYD 124

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           W  ++  +D LR IG  F+VN M+  + V SRL  E  +SF EF+Y ILQ+ DF+ L +N
Sbjct: 125 WTKNLTLLDFLRNIGKRFNVNTMIKKDIVASRL--ETGISFTEFSYQILQSMDFLHLFEN 182

Query: 191 YDCRLQMGGSDQWGNIICGIDL--GERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
            D RLQ+GG+DQWGNI  G++L   E     + F LT PL+  + GTK GKT  GAIWL+
Sbjct: 183 EDVRLQIGGADQWGNITSGLELIRKEAGADAEAFGLTIPLMLKSDGTKFGKTAGGAIWLD 242

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATEI 306
            E TSPY F+Q+W N +DADVV + K  T L   EID + +      E  EA++ +A E+
Sbjct: 243 PEKTSPYEFYQFWLNQNDADVVKYLKYFTFLNKEEIDALEEKVATQPEKREAQRRLAEEM 302

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLI 356
           TT VHG+   + A T     F  +I             +MP  ++ K+    G  L   +
Sbjct: 303 TTFVHGQTGLQDAQTITEALFSGNIQDLSAKQIEQGFGNMPGSTMPKE----GNNLAVWL 358

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V AG   S  ++R  + + AI IN   + +   +I   D      I +  GKK + +  +
Sbjct: 359 VDAGVEGSRRQSREDINNGAIYINGQRLQDVDYEISAADAIEGKYIVVRRGKKKYFLITI 418

Query: 417 CG 418
            G
Sbjct: 419 EG 420


>gi|329940721|ref|ZP_08290001.1| tyrosyl-tRNA synthetase [Streptomyces griseoaurantiacus M045]
 gi|329300015|gb|EGG43913.1| tyrosyl-tRNA synthetase [Streptomyces griseoaurantiacus M045]
          Length = 423

 Score =  253 bits (647), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 148/423 (34%), Positives = 230/423 (54%), Gaps = 13/423 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +D +  L  RG   Q ++   L    + G VT Y G+D TA SLH GHL Q++ +  LQ+
Sbjct: 2   TDIVDELKWRGLFAQSTDEDALRKALADGPVTFYCGFDPTAPSLHVGHLVQVLTVRRLQQ 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQE-IQENIEKIKGIFSSFIKYGTGKTDAL 124
            GH+P++L+GG T  IGDP  R  + R + S E +   +E+++G    F+ +  G+  A+
Sbjct: 62  AGHRPLALVGGATGQIGDP--RPTAERTLNSPETVAGWVERLRGQIEPFLSF-EGENAAV 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M+NN  W   +  I+ LR+IG  F VN+ML+ +SV  RL+  + +S+ EF+Y +LQA DF
Sbjct: 119 MVNNLDWTAGLSAIEFLRDIGKHFRVNKMLTKDSVARRLESSEGISYTEFSYQLLQAMDF 178

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT-PKLFALTSPLLTTASGTKMGKTLSG 243
           +EL + Y C +Q GGSDQWGN+  G+DL  RL+    + A  +PL+T A GTK GKT  G
Sbjct: 179 LELYRRYGCTMQQGGSDQWGNLTAGLDLLHRLEPDAAVHAYATPLMTKADGTKFGKTEGG 238

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT--TLPMSEIDRMAKLQGKEINEAKKI 301
           A+WL+ EMT+PY F+Q+W N+DD D+  + + L+  +    E       +  +   A++ 
Sbjct: 239 AVWLDPEMTTPYAFYQFWLNVDDRDISGYLRILSFKSREELEELERQTEERPQARAAQRA 298

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMS-IHSQHMPTISISKDE-----VSRGMGLLTL 355
           +A E+T +VHG E+A     A+   F    +      T++ +  E     V     ++ L
Sbjct: 299 LAEELTALVHGPEQAAAVIAASKALFGQGELTGLDEATLAAALSELPHVKVGELAPVVDL 358

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
             + G A S + ARR +K     +NN  ++ E      +D      + L  GK+N     
Sbjct: 359 FAEVGLAPSKSAARRTVKEGGAYVNNVKVAAEDAVPAAEDLLHGRWLVLRRGKRNLAAVE 418

Query: 416 LCG 418
             G
Sbjct: 419 YTG 421


>gi|256379450|ref|YP_003103110.1| tyrosyl-tRNA synthetase [Actinosynnema mirum DSM 43827]
 gi|255923753|gb|ACU39264.1| tyrosyl-tRNA synthetase [Actinosynnema mirum DSM 43827]
          Length = 427

 Score =  253 bits (647), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 135/415 (32%), Positives = 234/415 (56%), Gaps = 15/415 (3%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L+ RG I Q ++   L      G +T Y G+D +A SLHAG+L  L++L   Q+ G
Sbjct: 8   ILDELTWRGLIAQSTDLDALREDLDSGPLTLYCGFDPSAPSLHAGNLVPLLMLRRFQRAG 67

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQE-IQENIEKIKGIFSSFIKYGTGKTDALML 126
           H+P+ L GG T +IGDP  RD + R +   + + E + +IKG    F+++  G T A+++
Sbjct: 68  HRPVILAGGATGMIGDP--RDTAERQLNPVDTVAEWVGRIKGQLERFVEFDDGPTGAIVV 125

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   +  ++ LR++G  FSVN ML+ E+V+ RL  +  +SF EF+Y++LQ++D++ 
Sbjct: 126 NNLDWTGPMPVLEFLRDVGKHFSVNVMLARETVKRRLASD-GMSFTEFSYLLLQSHDYLR 184

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA-I 245
           L +++   LQ+GGSDQWGN++ G+DL  +++   + A+T+PL+T + G K GK+  G  +
Sbjct: 185 LHRDHGVALQIGGSDQWGNLVGGVDLIRKVEGHAVHAMTAPLVTDSEGRKFGKSTGGGNV 244

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIA 303
           WL+  MTSPY ++QY+ N+ DA+V+ + +  + L   EI  + +       +  A++ +A
Sbjct: 245 WLDPSMTSPYAWYQYFVNVGDAEVIHYLRLFSFLSREEIAELEEQTASAPHLRAAQRKLA 304

Query: 304 TEITTMVHGREEAEKAATAAMECF--------DMSIHSQHMPTISISKDEVSRGMGLLTL 355
              T +VHG+ E E+   A+   F        D+S     M  +   +  ++    ++ L
Sbjct: 305 ELFTDLVHGQHEREQVVVASQALFGRGELRELDLSTLDAAMAEVPSGEVALADAPTIVDL 364

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
           ++    A S   ARR +K     +NN+ +++E+     +D      + +  GK+N
Sbjct: 365 LIAGDLADSRGAARRAVKEGGAYVNNTKVTDEEWTPTAEDLLHGTWLVVRRGKRN 419


>gi|299145188|ref|ZP_07038256.1| tyrosine--tRNA ligase [Bacteroides sp. 3_1_23]
 gi|298515679|gb|EFI39560.1| tyrosine--tRNA ligase [Bacteroides sp. 3_1_23]
          Length = 430

 Score =  253 bits (647), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 146/427 (34%), Positives = 227/427 (53%), Gaps = 22/427 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG +  I    E   L S+  VTAY+G D TA SLH GHL  +M+L   Q+ 
Sbjct: 2   NFVEELRWRGMLQDIMPGTEE--LLSKEQVTAYLGIDPTADSLHIGHLCGVMILRHFQRC 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD-ALM 125
           GHKP++L+GG T +IGDPS +   R ++  + ++ N   IK   + F+ + +   + A +
Sbjct: 60  GHKPLALIGGATGMIGDPSGKSAERNLLDEETLRHNQACIKNQLAKFLDFESDVPNRAEL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQAYD 183
           +NN  W+    ++D +RE+G   +VN M++ +SV+ RL  E    LSF EF Y +LQ YD
Sbjct: 120 VNNYDWMKDFTFLDFVREVGKHITVNYMMAKDSVKRRLNGEARDGLSFTEFTYQLLQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ L +   C+LQMGGSDQWGNI  G +L  R    ++FALT PL+T A G K GKT SG
Sbjct: 180 FLHLYETKGCKLQMGGSDQWGNITTGAELIRRTNGGEVFALTCPLITKADGGKFGKTESG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINEAKKI 301
            IWL+   TSPY F+Q+W N+ D+D   + K  T++   EI+ +     K   +   +K 
Sbjct: 240 NIWLDPRYTSPYKFYQFWLNVSDSDAERYIKIFTSIEKEEIEALIAEHQKAPHLRLLQKR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDEVS 347
           +A E+T MVH  ++   A  A+   F  +                 + +P   IS+D ++
Sbjct: 300 LAKEVTVMVHSEDDYNAAVDASNILFGNATSEALRKLDEDTLLAVFEGVPQFEISRDVLA 359

Query: 348 RGMGLLTLIV-KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+  + L V  A    S  E R+ ++   + +N   ++     +   +      + +  
Sbjct: 360 EGVKAVDLFVDNAAVFASKGEMRKLVQGGGVSLNKEKLAAFDQVVTTANLLDEKYLLVQR 419

Query: 407 GKKNHII 413
           GKKN+ +
Sbjct: 420 GKKNYYL 426


>gi|227545498|ref|ZP_03975547.1| tyrosine--tRNA ligase [Lactobacillus reuteri CF48-3A]
 gi|300908935|ref|ZP_07126398.1| tyrosine--tRNA ligase [Lactobacillus reuteri SD2112]
 gi|227184519|gb|EEI64590.1| tyrosine--tRNA ligase [Lactobacillus reuteri CF48-3A]
 gi|300894342|gb|EFK87700.1| tyrosine--tRNA ligase [Lactobacillus reuteri SD2112]
          Length = 420

 Score =  253 bits (646), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 155/424 (36%), Positives = 236/424 (55%), Gaps = 24/424 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D L+ L  RG I+Q+++   L  L S+  +  Y G D T  SLH GHL   M+L   Q  
Sbjct: 6   DILNELEWRGAINQVTDEEGLRKLTSEDKIALYCGTDPTGDSLHIGHLIPFMILKRFQLA 65

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P+ ++GGGT  IGDPS R   R++    ++  N E +    ++ +K   G  +  ++
Sbjct: 66  GHHPVIIIGGGTGAIGDPSGRKSERQLQTMDQVHHNEEAL----TAQMKKLFGTENFTIV 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  I  +D LR+ G  F++N ML+ E V SRL  +  +SF EF Y ILQ+ DF+ 
Sbjct: 122 NNYEWLSKISLLDFLRDYGKLFNINTMLNKEVVASRL--DAGISFTEFTYQILQSVDFLH 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLK--TPKLFALTSPLLTTASGTKMGKTLSGA 244
           L ++ D +LQ+GGSDQWGNI  GIDL  +++    K++ LT PL+  A GTK GKT  GA
Sbjct: 180 LYRHNDVQLQIGGSDQWGNITAGIDLIHKVEGSDTKVYGLTIPLMLKADGTKFGKTAGGA 239

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKII 302
           IWL+ E TSPY F+Q+W N DD DV+ + K  T L   EID +A+   KE    EA++ +
Sbjct: 240 IWLDPEKTSPYEFYQFWINQDDRDVIKYLKYFTFLSKEEIDDLAEKVEKEPWKREAQRRL 299

Query: 303 ATEITTMVHGREEAEKAATAAMECF-----DMSIHS-----QHMPTISISKDEVSRGMGL 352
           A E+T  VHG+E  E+A   +   F     D+S+       ++MP++ +     ++   +
Sbjct: 300 AQEVTKFVHGQEAVEEAERISKALFSGDVTDLSVAEIEQGFKNMPSVDVE----NKKENI 355

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           +  +   G  +S  +AR+ + S AI+IN   + +   +I  Q       + +  GKK++ 
Sbjct: 356 VLWLTDNGIESSRRQARQDVSSGAIRINGEKVDDVDAEIDPQAHFDGKFVIVRKGKKHYY 415

Query: 413 ICHL 416
           +  +
Sbjct: 416 LARV 419


>gi|257069302|ref|YP_003155557.1| tyrosyl-tRNA synthetase [Brachybacterium faecium DSM 4810]
 gi|256560120|gb|ACU85967.1| tyrosyl-tRNA synthetase [Brachybacterium faecium DSM 4810]
          Length = 422

 Score =  253 bits (646), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 148/421 (35%), Positives = 229/421 (54%), Gaps = 14/421 (3%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L  L+ RG + Q +    L    + G V+ Y G+D TA+SLH GHLTQ++ +  LQ  GH
Sbjct: 5   LDELAWRGLVVQTTGREALGSALADGPVSLYCGFDPTAASLHVGHLTQVLTMRRLQLAGH 64

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN-IEKIKGIFSSFIKYGTGKTDALMLN 127
            P +L+GG T +IGDP    E  R++   EI    +E ++   S F+    G+    M+N
Sbjct: 65  HPYALVGGATGLIGDPRMSGE--RVLNDSEIVATWVESLRDQISRFLDL-EGEYGVTMVN 121

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W+  +  +D LR++G  F +  ML+ ++V  RL+ ++ +S+ EF+Y +LQ  D++EL
Sbjct: 122 NLDWIGQMSALDFLRDMGKHFRMGTMLAKDTVARRLQSDEGISYTEFSYQVLQGIDYLEL 181

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            + +   LQ GG+DQWGN++ G+DL  +++   + ALT+PL+T A G+K GK+  GA+WL
Sbjct: 182 HRRHGVTLQYGGNDQWGNLLSGVDLIHKVEGHDVHALTTPLVTKADGSKFGKSEGGAVWL 241

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKKIIATE 305
           + E+TSPY F Q+W N  DADV+++ +  T     EI  +  A         A+K +A +
Sbjct: 242 DAELTSPYAFHQFWLNAADADVLNYLRFFTFRSREEIAELEHATETASHQRAAQKALADD 301

Query: 306 ITTMVHGREEAEKAATAAMECFDMS----IHSQHMPTIS--ISKDEVSRGMGLLTLIVKA 359
           ITTMVHG +   +A  AA   F       +  Q +  I+  +   EV+    L+     A
Sbjct: 302 ITTMVHGEQATSQAKAAAAVLFGRGDVRELDEQTLLAIARELPGAEVAPTTLLVDAFCDA 361

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD--STGNIKLSFGKKNHIICHLC 417
           G   S   ARR  +   + +N   IS E LQ +  D      G++ L  G+KN  +  L 
Sbjct: 362 GITASKGAARRDAQGGGLSVNGEKISAEDLQRESGDLAPLPGGHLLLRRGRKNAAMVRLN 421

Query: 418 G 418
           G
Sbjct: 422 G 422


>gi|88801697|ref|ZP_01117225.1| tyrosyl-tRNA synthetase [Polaribacter irgensii 23-P]
 gi|88782355|gb|EAR13532.1| tyrosyl-tRNA synthetase [Polaribacter irgensii 23-P]
          Length = 430

 Score =  253 bits (646), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 144/428 (33%), Positives = 235/428 (54%), Gaps = 25/428 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG ++      E  +L  + + +AY+G+D TA SLH G+L  +MLL   Q+ 
Sbjct: 3   NFIEELQWRGMLNDSMPGTEEHLL--EEMRSAYVGFDPTADSLHIGNLVPIMLLAHFQRC 60

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD--AL 124
           GHKPI+L+GG T +IGDPS +   R ++  + ++ N E +K    +F+ + + KT+  AL
Sbjct: 61  GHKPIALVGGATGMIGDPSGKSSERNLLDEKTLRHNQECVKAQLGNFLDFKS-KTENAAL 119

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQAY 182
           ++NN  W+  I +++ +R++G   SVN M++ +SV++R+  E  + +SF EF Y ++Q Y
Sbjct: 120 LVNNYDWMKEISFLEFIRDVGKHISVNYMMAKDSVKNRISSESKEGMSFTEFTYQMVQGY 179

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DF+ L +     LQMGGSDQWGNI  G +L  R+   K +A+T PL+T + G+K GK+  
Sbjct: 180 DFLHLFRENATTLQMGGSDQWGNITTGTELIRRIAGGKGYAITCPLITKSDGSKFGKSEG 239

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKK 300
           G +WL+ + TS Y F+QYW N  D D   + +  T L    ++ +     + + +   +K
Sbjct: 240 GNVWLDAKRTSAYKFYQYWLNTSDEDAEKYIRIFTFLDQKTVESLIAEHSEAQHMRVLQK 299

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDEV 346
            +  E+T +VHG+E  EKA  A+   F  S  +                +P  ++S   +
Sbjct: 300 RLGEEVTLLVHGKEAYEKAIAASNILFGKSTAADLKALDEQTFLDVFDGVPQATVSLAAI 359

Query: 347 SRGMGLL-TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLS 405
             G+ ++  L  +  F  S  +ARR LK NAI +N   I  E   I  +D  +   + L 
Sbjct: 360 EEGLDMIGALAAQTSFLDSNGDARRALKENAISVNKEKIK-ENYTISKEDLIANKYVLLQ 418

Query: 406 FGKKNHII 413
            GKK + +
Sbjct: 419 RGKKTYYL 426


>gi|229916423|ref|YP_002885069.1| tyrosyl-tRNA synthetase [Exiguobacterium sp. AT1b]
 gi|229467852|gb|ACQ69624.1| tyrosyl-tRNA synthetase [Exiguobacterium sp. AT1b]
          Length = 415

 Score =  253 bits (646), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 144/387 (37%), Positives = 221/387 (57%), Gaps = 22/387 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + L  L  RG ++Q+++   L     Q   T Y G+D TA SLH GHL  ++ L   Q+ 
Sbjct: 2   ELLKDLEFRGLVNQMTDEEGLKEQLKQ-PTTLYTGFDPTADSLHIGHLLPILTLKRFQQA 60

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+ I+L+GG T +IGDPS R + R +     ++   ++IK   S F+    G+    + 
Sbjct: 61  GHQVIALVGGATGMIGDPSGRSDERSLNTLDTVKLFSDRIKDQLSRFLPL-EGENPITIR 119

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   +  ID LR+IG  F ++ ML+ +SV SR+  E  +S+ EF+YM+LQ+YDF++
Sbjct: 120 NNYEWTEEMSIIDFLRDIGKHFPISYMLAKDSVDSRM--ENGISYTEFSYMLLQSYDFLK 177

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERL-KTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           L +   CRLQ+GGSDQWGNI  G++L  R   + K F LT PL+T + G K GKT  GA+
Sbjct: 178 LYETEKCRLQVGGSDQWGNITAGLELIRRFGHSEKAFGLTVPLVTKSDGQKFGKTAGGAV 237

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIA 303
           WL+ + TSPY F+Q+W N+DDADV+ F K  T +   EI+ +A    +  E   A++ +A
Sbjct: 238 WLDADKTSPYEFFQFWINVDDADVIKFIKYFTFMSHEEIEALATEVTEAPEKRVAQRRLA 297

Query: 304 TEITTMVHGR---EEAEKAATA-------AMECFDMSIHSQHMPTISISKDEVSRGMGLL 353
            E+T +VHG    E+AE+   A       +++  DM    + MP   +  +       ++
Sbjct: 298 EEMTKLVHGEAGLEQAERITKAFFSGDLTSLQPEDMEDAFKGMPQFELDGER-----NIV 352

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKIN 380
            L+V+A  + S  +AR  + + AI +N
Sbjct: 353 DLLVEANISPSKRQAREDVTNGAIYLN 379


>gi|239932103|ref|ZP_04689056.1| tyrosyl-tRNA synthetase [Streptomyces ghanaensis ATCC 14672]
 gi|291440470|ref|ZP_06579860.1| tyrosyl-tRNA synthetase [Streptomyces ghanaensis ATCC 14672]
 gi|291343365|gb|EFE70321.1| tyrosyl-tRNA synthetase [Streptomyces ghanaensis ATCC 14672]
          Length = 422

 Score =  253 bits (645), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 149/423 (35%), Positives = 229/423 (54%), Gaps = 13/423 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +D +  L  RG   Q ++   L    + G VT Y G+D TA SLH GHL Q++ L  LQ+
Sbjct: 2   TDIVDELKWRGLFAQSTDEDALRKALADGPVTFYCGFDPTAPSLHVGHLVQVLTLRRLQQ 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQE-IQENIEKIKGIFSSFIKYGTGKTDAL 124
            GH+P++L+GG T  IGDP  R  + R +   E +   +E+++G    F+ +  G+  A 
Sbjct: 62  AGHRPLALVGGATGQIGDP--RPTAERTLNPPETVAGWVERLRGQIEPFLSF-EGEGAAE 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M+NN  W  ++  I+ LR+IG  F VN+ML+ +SV  RL+  + +S+ EF+Y +LQA DF
Sbjct: 119 MVNNLDWTQNLSAIEFLRDIGKHFRVNKMLTKDSVARRLESSEGISYTEFSYQLLQAMDF 178

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT-PKLFALTSPLLTTASGTKMGKTLSG 243
           ++L + Y C LQ GGSDQWGN+  G+DL  RL+    + A  +PL+T A GTK GKT SG
Sbjct: 179 LQLYRRYGCTLQQGGSDQWGNLTAGLDLIHRLEPDATVHAYATPLMTKADGTKFGKTESG 238

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT--TLPMSEIDRMAKLQGKEINEAKKI 301
           A+WL+ EMT+PY F+Q+W N DD D+  + + L+  +    E       +  +   A++ 
Sbjct: 239 AVWLDPEMTTPYAFYQFWLNTDDRDISRYLRILSFRSRAELEELEQQTEERPQARAAQRA 298

Query: 302 IATEITTMVHGREE------AEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTL 355
           +A E+TT+VHG ++      A KA     E   +   +       +    VS    ++ L
Sbjct: 299 LAEELTTLVHGADQTAAVIAASKALFGQGELAGLDERTLAAALSEVPHVRVSELGPVVDL 358

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
             + G   S + ARR +K     +NN+ ++ E      +D      + L  GKKN     
Sbjct: 359 FAEVGLVASKSAARRTVKEGGAYVNNAKVTAEDAVPAREDLLHGRWLVLRRGKKNLAAVE 418

Query: 416 LCG 418
           + G
Sbjct: 419 VTG 421


>gi|294811867|ref|ZP_06770510.1| Tyrosyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|294324466|gb|EFG06109.1| Tyrosyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
          Length = 455

 Score =  253 bits (645), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 150/423 (35%), Positives = 229/423 (54%), Gaps = 13/423 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +D +  L  RG I Q ++   L    + G VT Y G+D TA SLH G+L Q++ +  +Q 
Sbjct: 29  TDIVDELQWRGLIAQSTDEDALRKAFADGPVTFYCGFDPTAPSLHLGNLVQILTMRRIQL 88

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            G++P+ L+GG T +IGDP    E R +   + + E + +++     F+ +  G   A M
Sbjct: 89  AGNRPLGLVGGATGLIGDPKPNAE-RTLNAPETVAEWVGRLRAQIERFLDF-EGPYAARM 146

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  W   +  ID LR++G +F VN+M++ E+V  RL  +  +S+ EF+Y ILQ  D++
Sbjct: 147 VNNLDWTSGLSAIDFLRDVGKYFRVNKMIAKEAVARRLNSDAGISYTEFSYQILQGMDYL 206

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK-LFALTSPLLTTASGTKMGKTLSGA 244
           EL + + C LQ GGSDQWGN+  G DL  R++    + AL +PL+T A GTK GKT SG 
Sbjct: 207 ELYRRHGCTLQTGGSDQWGNLTAGTDLIHRVEPEAGVHALATPLITKADGTKFGKTESGT 266

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE---INEAKKI 301
           +WL+ E TSPY F+Q+W N DD DV  F +  +    +EI+ + + Q +E      A++ 
Sbjct: 267 VWLDAERTSPYAFYQFWLNADDRDVAKFLRIFSFRSRAEIEELER-QTEERPQARAAQRA 325

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMS-IHSQHMPTISISKDEVSRG-----MGLLTL 355
           +A E+TT+VHG E+   A  AA   F    +     PT+  +  E+ R        ++ L
Sbjct: 326 LAQELTTLVHGAEQCAAAEYAAKALFGQGELGELDEPTLRAALGELPRASVEELAPVVDL 385

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
             +AG A S + ARR +K     +NN  ++ E       D      + L  GKKN     
Sbjct: 386 FAEAGLAASKSAARRTVKEGGAYVNNVKVTTEDAVPSPGDLLHGRWLVLRRGKKNLAAIE 445

Query: 416 LCG 418
           + G
Sbjct: 446 VTG 448


>gi|229087577|ref|ZP_04219707.1| Tyrosyl-tRNA synthetase [Bacillus cereus Rock3-44]
 gi|228695693|gb|EEL48548.1| Tyrosyl-tRNA synthetase [Bacillus cereus Rock3-44]
          Length = 420

 Score =  253 bits (645), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 150/419 (35%), Positives = 221/419 (52%), Gaps = 21/419 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R  I+Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  GH P+
Sbjct: 7   LEWRDAINQQTDEEGLRKLVEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLAGHHPV 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+GG T  IGDPS R   R++   +++Q N++ +         +G G ++  M+NN  W
Sbjct: 67  ILIGGATGTIGDPSGRQTERQLQTLEQVQHNVDALTAQMKKLFDFG-GNSEVKMVNNYDW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
              I  I+ LR+ G  FSVN ML+ + V SRL  +  +SF EF Y ILQ+ DF  L K  
Sbjct: 126 THQINIIEFLRDYGKNFSVNSMLAKDIVASRL--DTGISFTEFTYQILQSMDFHHLYKEE 183

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
             +LQ+GGSDQWGNI  G+DL  RL+ P  K+F LT PLL  + GTK GKT  GAIWL+ 
Sbjct: 184 GVQLQIGGSDQWGNITSGLDLIRRLEGPEAKVFGLTIPLLLKSDGTKFGKTAGGAIWLDP 243

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA-KLQGK-EINEAKKIIATEIT 307
           E T+P+ F+Q+W N DD DV+ + K  T L    ID +A K+Q +    EA+K++  E+T
Sbjct: 244 EKTTPFEFYQFWVNTDDRDVIKYLKFFTFLTKDVIDELAVKVQAEPHKREAQKVLGEEMT 303

Query: 308 TMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIV 357
             VHG +   +A       F   I S          + MPT    K+  +    ++  +V
Sbjct: 304 KFVHGEDAFLQAIKITEALFSGDIKSLTADEIEQGFKDMPTFHAPKESKN----IVEWLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             G   S  +AR  + + AI +N   +++    + + +      I +  GKKN+ +  L
Sbjct: 360 DLGIEPSRRQAREDINNGAILMNGDKVTDVSTDVTVDNSFDGRFIIIRKGKKNYSLVKL 418


>gi|323356713|ref|YP_004223109.1| tyrosyl-tRNA synthetase [Microbacterium testaceum StLB037]
 gi|323273084|dbj|BAJ73229.1| tyrosyl-tRNA synthetase [Microbacterium testaceum StLB037]
          Length = 437

 Score =  253 bits (645), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 143/403 (35%), Positives = 223/403 (55%), Gaps = 25/403 (6%)

Query: 2   PAFKSDFLSILSE---RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLM 58
           PA    F ++  E   RG IH  ++  EL  L   G +  Y G+D TA SLH G+L QL+
Sbjct: 15  PANDPTFDNVWDELVYRGLIHVSTDETELRDLLGAGPIVFYCGFDPTAPSLHLGNLVQLL 74

Query: 59  LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQE-IQENIEKIKGIFSSFIKYG 117
            +  LQ  GH+P+ L+GG T ++GDP  R  + R + ++E + E + +++     F+ + 
Sbjct: 75  TMRRLQLAGHRPLGLVGGSTGLVGDP--RPTAERTLNTRETVAEWVARLRAQVERFLSF- 131

Query: 118 TGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYM 177
            G + A M+NN  W   +  ID LREIG  F V  ML  ++V +RL  E  +S+ EF+Y 
Sbjct: 132 EGDSAARMVNNLDWTAPLSAIDFLREIGKHFRVGTMLKKDAVSARLNSEAGISYTEFSYQ 191

Query: 178 ILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
           ILQ  D++EL + Y C LQ GGSDQWGN+  G DL  +++   + A+ +PL+T + GTK 
Sbjct: 192 ILQGLDYLELYRQYGCVLQTGGSDQWGNLTSGTDLVRKVEGASVHAIGTPLITNSDGTKF 251

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI-- 295
           GK+   AIWL+ +M SP+  +Q+W N DD DV+   K  T L  +EI+  AKL   E   
Sbjct: 252 GKSEGNAIWLDADMCSPWAMYQFWLNTDDRDVIERLKVFTFLTRAEIEEYAKLVETEPFR 311

Query: 296 NEAKKIIATEITTMVHGRE--EAEKAATAAM------ECFDMSIHS---QHMPTISISKD 344
             A+K +A E+ T VHG E  EA  AAT A+      +  D ++     + +P  +++  
Sbjct: 312 RAAQKRLAREVVTTVHGAEATEAVIAATEALFGQGDVKALDAAVLRTALEELPHATLAA- 370

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNE 387
               G  +L  +   G + S ++ARR +    + ++   ++++
Sbjct: 371 ----GSTVLDALTATGLSGSLSDARRAIAQGGVTLDGEKVTSD 409


>gi|116628855|ref|YP_814027.1| tyrosyl-tRNA synthetase [Lactobacillus gasseri ATCC 33323]
 gi|116094437|gb|ABJ59589.1| tyrosyl-tRNA synthetase [Lactobacillus gasseri ATCC 33323]
          Length = 426

 Score =  253 bits (645), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 150/387 (38%), Positives = 211/387 (54%), Gaps = 17/387 (4%)

Query: 5   KSDFLSILSERGFIHQISNPREL-DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           K D L  L  RG I+Q ++   L   L     +  Y G D T  SLH GHL   M+L   
Sbjct: 9   KFDILEDLKWRGAINQETDEEGLRKYLAEHDDLALYCGTDPTGDSLHIGHLIPFMILKRF 68

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q  G+ P+ L+GGGT  IGDPS R   R +  +++++ N EK+    ++ +K   G  + 
Sbjct: 69  QMAGYHPVILIGGGTGSIGDPSGRKTERVLQTAEQVKHNEEKL----TTQMKKLFGTENF 124

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            + NN  WL  +  ID LR+ G FF VN M++ + V SRL  E  +SF EF+Y ILQA D
Sbjct: 125 EIKNNAEWLGKLNLIDFLRDYGKFFQVNNMINKDVVASRL--ENGISFTEFSYQILQAID 182

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK--LFALTSPLLTTASGTKMGKTL 241
           F  L K+   +LQ+GGSDQWGNI  GIDL  +L+  +   F LT PL+  A GTK GK+ 
Sbjct: 183 FYHLNKDNGVQLQIGGSDQWGNITAGIDLIHKLEGQERPAFGLTIPLMLKADGTKFGKSA 242

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAK 299
            GA+WL+ E TSPY F+Q+W N DD DVV + K  T L   EI+ +A+   KE     A+
Sbjct: 243 GGAVWLDPEKTSPYEFYQFWINQDDRDVVKYLKYFTFLSREEIEDLAEKTEKEPWKRAAQ 302

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI------SISKDEVSRGMGLL 353
           K +A E+T  VHG E  ++A       F  ++ S  +P I      + S +       ++
Sbjct: 303 KRLAEEVTKFVHGEEGLKEAQMITEALFSGNVKSLSVPQIEQALKNAPSAEATHEAKNIV 362

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKIN 380
             +V+     S  +AR  +K+ AI +N
Sbjct: 363 EFLVETKIEPSKRQAREDVKNGAIYVN 389


>gi|282852519|ref|ZP_06261861.1| tyrosine--tRNA ligase [Lactobacillus gasseri 224-1]
 gi|282556261|gb|EFB61881.1| tyrosine--tRNA ligase [Lactobacillus gasseri 224-1]
          Length = 420

 Score =  253 bits (645), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 150/387 (38%), Positives = 211/387 (54%), Gaps = 17/387 (4%)

Query: 5   KSDFLSILSERGFIHQISNPREL-DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           K D L  L  RG I+Q ++   L   L     +  Y G D T  SLH GHL   M+L   
Sbjct: 3   KFDILEDLKWRGAINQETDEEGLRKYLAEHDDLALYCGTDPTGDSLHIGHLIPFMILKRF 62

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q  G+ P+ L+GGGT  IGDPS R   R +  +++++ N EK+    ++ +K   G  + 
Sbjct: 63  QMAGYHPVILIGGGTGSIGDPSGRKTERVLQTAEQVKHNEEKL----TTQMKKLFGTENF 118

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            + NN  WL  +  ID LR+ G FF VN M++ + V SRL  E  +SF EF+Y ILQA D
Sbjct: 119 EIKNNAEWLGKLNLIDFLRDYGKFFQVNNMINKDVVASRL--ENGISFTEFSYQILQAID 176

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK--LFALTSPLLTTASGTKMGKTL 241
           F  L K+   +LQ+GGSDQWGNI  GIDL  +L+  +   F LT PL+  A GTK GK+ 
Sbjct: 177 FYHLNKDNGVQLQIGGSDQWGNITAGIDLIHKLEGQERPAFGLTIPLMLKADGTKFGKSA 236

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAK 299
            GA+WL+ E TSPY F+Q+W N DD DVV + K  T L   EI+ +A+   KE     A+
Sbjct: 237 GGAVWLDPEKTSPYEFYQFWINQDDRDVVKYLKYFTFLSREEIEDLAEKTEKEPWKRAAQ 296

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI------SISKDEVSRGMGLL 353
           K +A E+T  VHG E  ++A       F  ++ S  +P I      + S +       ++
Sbjct: 297 KRLAEEVTKFVHGEEGLKEAQMITEALFSGNVKSLSVPQIEQALKNAPSAEATHEAKNIV 356

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKIN 380
             +V+     S  +AR  +K+ AI +N
Sbjct: 357 EFLVETKIEPSKRQAREDVKNGAIYVN 383


>gi|226312369|ref|YP_002772263.1| tyrosyl-tRNA synthetase [Brevibacillus brevis NBRC 100599]
 gi|226095317|dbj|BAH43759.1| tyrosyl-tRNA synthetase [Brevibacillus brevis NBRC 100599]
          Length = 422

 Score =  253 bits (645), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 156/426 (36%), Positives = 229/426 (53%), Gaps = 33/426 (7%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R  ++Q ++   L  L ++  V+ Y G D T  S+H GHL   M+L   Q  GH+P+
Sbjct: 9   LEWREAVNQQTDAEGLRELTNEKAVSLYCGVDPTGDSMHIGHLIPFMVLKRFQLAGHRPV 68

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSS-FIKYGTGKTDALMLNNET 130
            L+GG T  IGDPS R   R +   ++IQEN++K+       FI  G  +    ++NN  
Sbjct: 69  ILIGGATGTIGDPSGRQSERSLQTLEQIQENVDKLTAQMKKLFITEGDNQIR--LVNNYD 126

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           W   I  I+ LR+ G  FS+N ML+ + V SRL  E  +SF EF+Y ILQ+ D++ L K+
Sbjct: 127 WTHKINVIEFLRDYGKNFSINTMLAKDVVSSRL--ESGISFTEFSYQILQSLDYLHLYKH 184

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLK--TPKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
            D +LQ+GGSDQWGNI  G+DL  + +    K F LT PL+  A GTK GKT  GAIWL+
Sbjct: 185 EDVQLQIGGSDQWGNITSGLDLIRKKEGSEAKAFGLTIPLMLKADGTKFGKTAGGAIWLD 244

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA-KLQGK-EINEAKKIIATEI 306
              T+P+ F+Q+W N DD DVV + K  T L   +I+ +A K+Q +    EA+K +A E+
Sbjct: 245 PNKTTPFEFYQFWANTDDRDVVKYLKYFTFLSKEQIEELAEKVQSEPHKREAQKALAEEM 304

Query: 307 TTMVHGRE--EAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGM-------------G 351
           T  VHG E  E  K  TAA+   D+          S+S DE+ +G               
Sbjct: 305 TRFVHGEELLEQAKRITAALFTGDIK---------SLSADEIEQGFKEMPTFESTLETKN 355

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           ++  +V+ G   S  +AR  +   AI +N   +++ +L++          I +  GKKN+
Sbjct: 356 IVDWLVEIGIEPSKRQAREDITKGAISMNGERVTDLELEVTPSLAIGGRFIIIRKGKKNY 415

Query: 412 IICHLC 417
            +  L 
Sbjct: 416 SLVKLS 421


>gi|159037519|ref|YP_001536772.1| tyrosyl-tRNA synthetase [Salinispora arenicola CNS-205]
 gi|157916354|gb|ABV97781.1| tyrosyl-tRNA synthetase [Salinispora arenicola CNS-205]
          Length = 428

 Score =  253 bits (645), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 143/421 (33%), Positives = 221/421 (52%), Gaps = 20/421 (4%)

Query: 2   PAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
           P  +      L  RG I   +   EL  L     +T Y+G+D TA SLH G+L Q++   
Sbjct: 8   PPGRDTLFDDLRWRGLIQDSTGLDELRALLDGPGMTFYVGFDPTAPSLHVGNLMQVVTAR 67

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN-IEKIKGIFSSFIKYGTGK 120
            LQ  GH+P+ L+GG T  IGDP  ++ + R++   E+    + +I+   + F+ Y  G 
Sbjct: 68  RLQLAGHRPLLLVGGATGQIGDP--KESAERVLNPPEVVAGWLARIRDQLAPFVSY-QGA 124

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
             A ++NN  W   +  ++ LR++G  F VNRML+ E +R+RL  E  +SF EF+Y +LQ
Sbjct: 125 NAARLVNNLDWTGEMSVVEFLRDVGKHFPVNRMLAREVIRARL--ESGVSFTEFSYQLLQ 182

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           A DF EL + + CRLQ GGSDQWGNI  G+D   R     + A T+PL+T + G K GKT
Sbjct: 183 ANDFFELHRRHGCRLQFGGSDQWGNITAGVDYTRRRGAGPVEAFTTPLVTRSDGMKFGKT 242

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEA 298
              AIWL+ E+TSPY F+Q+W N DD DV  + +  +    +E++ + K   +      A
Sbjct: 243 EGEAIWLDSELTSPYAFYQFWVNADDRDVARYLRYFSFRSRAELEALEKEAAERPAARVA 302

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI---------SISKDEVSRG 349
           ++ +A E+TT+VHG  E  +   A+   F      +  P +          +  DE+   
Sbjct: 303 QRALAEELTTLVHGEREMAQVVAASQALFGRGSLGELSPAVLRAALTEAGLVHLDELPDV 362

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
           +GLL    ++G   S  EARR +      +NN+ + + +  +   D      + L  GK+
Sbjct: 363 VGLLK---ESGLVPSNKEARRVIAEGGAYLNNNRVMSAEAVVAPDDLLHGRYLVLRRGKR 419

Query: 410 N 410
           +
Sbjct: 420 S 420


>gi|326440396|ref|ZP_08215130.1| tyrosyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
          Length = 428

 Score =  253 bits (645), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 150/423 (35%), Positives = 229/423 (54%), Gaps = 13/423 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +D +  L  RG I Q ++   L    + G VT Y G+D TA SLH G+L Q++ +  +Q 
Sbjct: 2   TDIVDELQWRGLIAQSTDEDALRKAFADGPVTFYCGFDPTAPSLHLGNLVQILTMRRIQL 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            G++P+ L+GG T +IGDP    E R +   + + E + +++     F+ +  G   A M
Sbjct: 62  AGNRPLGLVGGATGLIGDPKPNAE-RTLNAPETVAEWVGRLRAQIERFLDF-EGPYAARM 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  W   +  ID LR++G +F VN+M++ E+V  RL  +  +S+ EF+Y ILQ  D++
Sbjct: 120 VNNLDWTSGLSAIDFLRDVGKYFRVNKMIAKEAVARRLNSDAGISYTEFSYQILQGMDYL 179

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK-LFALTSPLLTTASGTKMGKTLSGA 244
           EL + + C LQ GGSDQWGN+  G DL  R++    + AL +PL+T A GTK GKT SG 
Sbjct: 180 ELYRRHGCTLQTGGSDQWGNLTAGTDLIHRVEPEAGVHALATPLITKADGTKFGKTESGT 239

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE---INEAKKI 301
           +WL+ E TSPY F+Q+W N DD DV  F +  +    +EI+ + + Q +E      A++ 
Sbjct: 240 VWLDAERTSPYAFYQFWLNADDRDVAKFLRIFSFRSRAEIEELER-QTEERPQARAAQRA 298

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMS-IHSQHMPTISISKDEVSRG-----MGLLTL 355
           +A E+TT+VHG E+   A  AA   F    +     PT+  +  E+ R        ++ L
Sbjct: 299 LAQELTTLVHGAEQCAAAEYAAKALFGQGELGELDEPTLRAALGELPRASVEELAPVVDL 358

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
             +AG A S + ARR +K     +NN  ++ E       D      + L  GKKN     
Sbjct: 359 FAEAGLAASKSAARRTVKEGGAYVNNVKVTTEDAVPSPGDLLHGRWLVLRRGKKNLAAIE 418

Query: 416 LCG 418
           + G
Sbjct: 419 VTG 421


>gi|238852821|ref|ZP_04643226.1| tyrosine--tRNA ligase [Lactobacillus gasseri 202-4]
 gi|238834515|gb|EEQ26747.1| tyrosine--tRNA ligase [Lactobacillus gasseri 202-4]
          Length = 420

 Score =  253 bits (645), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 150/387 (38%), Positives = 211/387 (54%), Gaps = 17/387 (4%)

Query: 5   KSDFLSILSERGFIHQISNPREL-DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           K D L  L  RG I+Q ++   L   L     +  Y G D T  SLH GHL   M+L   
Sbjct: 3   KFDILEDLKWRGAINQETDEEGLRKYLAEHDDLALYCGTDPTGDSLHIGHLIPFMILKRF 62

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q  G+ P+ L+GGGT  IGDPS R   R +  +++++ N EK+    ++ +K   G  + 
Sbjct: 63  QMAGYHPVILIGGGTGSIGDPSGRKTERVLQTAEQVKHNEEKL----TTQMKKLFGTENF 118

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            + NN  WL  +  ID LR+ G FF VN M++ + V SRL  E  +SF EF+Y ILQA D
Sbjct: 119 EIKNNAEWLGKLNLIDFLRDYGKFFQVNNMINKDVVASRL--ENGISFTEFSYQILQAID 176

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK--LFALTSPLLTTASGTKMGKTL 241
           F  L K+   +LQ+GGSDQWGNI  GIDL  +L+  +   F LT PL+  A GTK GK+ 
Sbjct: 177 FYHLNKDNGVQLQIGGSDQWGNITAGIDLIHKLEGQERPAFGLTIPLMLKADGTKFGKSA 236

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAK 299
            GA+WL+ E TSPY F+Q+W N DD DVV + K  T L   EI+ +A+   KE     A+
Sbjct: 237 GGAVWLDPEKTSPYEFYQFWINQDDRDVVKYLKYFTFLSREEIEDLAEKTEKEPWKRAAQ 296

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI------SISKDEVSRGMGLL 353
           K +A E+T  VHG E  ++A       F  ++ S  +P I      + S +       ++
Sbjct: 297 KRLAEEVTKFVHGEEGLKEAQMITEALFSGNVKSLSVPQIEQALKNAPSAEATHEAKNIV 356

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKIN 380
             +V+     S  +AR  +K+ AI +N
Sbjct: 357 EFLVETKIEPSKRQAREDVKNGAIYVN 383


>gi|326427881|gb|EGD73451.1| tyrosyl-tRNA synthetase [Salpingoeca sp. ATCC 50818]
          Length = 459

 Score =  252 bits (644), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 145/446 (32%), Positives = 239/446 (53%), Gaps = 37/446 (8%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           +  F+  L ERG +   S   EL  LC +  +T Y G+D TA +LH G+L  +M L    
Sbjct: 13  RRPFVGTLEERGLLKD-STSDELRTLCEKEQLTVYCGFDPTARTLHIGNLLAIMGLVHCV 71

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFI------KYGT 118
           + GH  I+L+GG T+ IGDPS R   R  +   E+  NI  I  +    +      +  T
Sbjct: 72  RAGHNVIALVGGATARIGDPSGRSTERTCLPEAELDANIAGITEVLHRILDNAQQYEAST 131

Query: 119 GKT---------------DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL 163
             T                  ++NN  W    + ID + +IG  F VN ML+ +SV+SR+
Sbjct: 132 EPTAQKSASATAATGAAPSVKVVNNAEWYDEWRVIDFIADIGRHFRVNSMLAKDSVKSRM 191

Query: 164 KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFA 223
           + ++ +SF EF Y +LQ +DF++L K ++CR+Q+GGSDQWGNI  GIDL  R+    ++ 
Sbjct: 192 EHDEGISFTEFTYQVLQGHDFLQLFKAHNCRVQLGGSDQWGNITAGIDLVRRVTGKSVYG 251

Query: 224 LTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSE 283
           +T PLLTT++G K GK+   A+WL+ ++TSPY  +Q++ N+ DADV  +   LT LP+S 
Sbjct: 252 VTMPLLTTSTGEKFGKSAGNAVWLDAQLTSPYELYQFFINMADADVERYLAALTLLPVST 311

Query: 284 IDRMAKLQGKEINE--AKKIIATEITTMVHGREEAEKAATAAMECF-----------DMS 330
           I ++ +   ++ +E  A+  +A+E+  +VHG    ++A TA    F            + 
Sbjct: 312 IKQVMEQHIQQPHERLAQHKLASEVVRLVHGAAAVDEAKTATDALFAHGSLDNVSAATLK 371

Query: 331 IHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKL 389
                 P+ ++ +  ++ G   +L+  V+AG  +S  EA+R LK+  + +NN+ +  +  
Sbjct: 372 AMFATAPSATLDRALITAGTTSILSAAVQAGLFSSKGEAKRTLKAGGLYVNNNRVERDA- 430

Query: 390 QIKLQDFDSTGNIKLSFGKKNHIICH 415
            +  +   +     L  G+K+++I H
Sbjct: 431 PLTSEHVLADALTVLRKGRKHYLIIH 456


>gi|229062739|ref|ZP_04200044.1| Tyrosyl-tRNA synthetase [Bacillus cereus AH603]
 gi|228716499|gb|EEL68202.1| Tyrosyl-tRNA synthetase [Bacillus cereus AH603]
          Length = 420

 Score =  252 bits (644), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 147/419 (35%), Positives = 220/419 (52%), Gaps = 21/419 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG ++Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  GH P+
Sbjct: 7   LEWRGAVNQQTDEEGLRKLVEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLAGHHPV 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+GG T  IGDPS R   R++   + +Q N++ +         +G G ++  M+NN  W
Sbjct: 67  ILIGGATGTIGDPSGRQSERQLQTLEVVQHNVDALTAQMKKLFDFG-GNSEVKMVNNYDW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
              I  I+ LR+ G  FS+N ML+ + V SRL  +  +SF EF Y ILQA DF  L    
Sbjct: 126 THKINIIEFLRDYGKNFSINSMLAKDIVASRL--DTGISFTEFTYQILQAMDFHHLYTKE 183

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLK--TPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
           D +LQ+GGSDQWGNI  G+DL  +L+    K+F LT PLL  + GTK GK+  GA+WL+ 
Sbjct: 184 DVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSAGGAVWLDP 243

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN--EAKKIIATEIT 307
           E T P+ F+Q+W N +D DV+ + K  T L    ID +A     E +  EA+K++A E+T
Sbjct: 244 EKTKPFEFYQFWVNTNDRDVIKYLKYFTFLTKERIDELAVKVETEPHKREAQKVLAEEMT 303

Query: 308 TMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIV 357
             VHG E   +A       F   I S          + MPT   SK+  +    ++  +V
Sbjct: 304 KFVHGEEAFLQAVKITAALFSGDIKSLTADEIEQGFKEMPTFQSSKETKN----IVEWLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             G   S  +AR  + + AI +N   +++    + +++      I +  GKKN+ +  L
Sbjct: 360 DLGIEPSRRQAREDINNGAISMNGEKVTDVSRDVTVENSFDGRFIIIRKGKKNYSLVEL 418


>gi|86141675|ref|ZP_01060199.1| tyrosyl-tRNA synthetase [Leeuwenhoekiella blandensis MED217]
 gi|85831238|gb|EAQ49694.1| tyrosyl-tRNA synthetase [Leeuwenhoekiella blandensis MED217]
          Length = 378

 Score =  252 bits (644), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 138/376 (36%), Positives = 212/376 (56%), Gaps = 22/376 (5%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           ++F+  L  RG IH +    E  ++  + + +AY+G D TA SLH GHL  +M+L   Q 
Sbjct: 3   TNFVEELQWRGMIHDVMPGTEEHLM--EQMRSAYVGIDPTADSLHIGHLVGVMMLKHFQA 60

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA-L 124
           +GH+PI+L+GG T +IGDPS + + R ++    ++ N E IK   S F+ + + + +A +
Sbjct: 61  SGHRPIALVGGATGMIGDPSGKSDERNLLDEDTLRHNQEAIKEQLSRFLDFDSDEENAAV 120

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQAY 182
           ++NN  W+    +++ +R++G   +VN M++ +SV+ RL  E  + +SF EF Y ++Q Y
Sbjct: 121 LVNNYDWMKDFSFLEFIRDVGKHITVNYMMAKDSVKKRLSAESAEGMSFTEFTYQLVQGY 180

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DF+ L +  +  LQMGGSDQWGNI  G +L  R+   K +A+T PL+T A GTK GKT  
Sbjct: 181 DFLHLYREKELTLQMGGSDQWGNITTGTELVRRIGGGKAYAMTCPLITKADGTKFGKTAG 240

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM-AKLQGKEINEA-KK 300
           G IWL+ E TSPY F+QYW N  D D   + K  T L   EI+ + A+ Q      A +K
Sbjct: 241 GNIWLDAERTSPYRFYQYWLNTSDEDAAKYIKIFTFLGKEEIENLIAEHQEAPHQRALQK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQ--------------HMPTISISKDEV 346
            +A E+T   HG E  E A  A+   F  S  +                +P   +S+ E+
Sbjct: 301 RLAEEVTISTHGVENYENAVKASEILFGKSTAANLKALNEKTFLDVFDGVPQAEVSRGEI 360

Query: 347 SRGMGLLT-LIVKAGF 361
             G+ +++ L  K GF
Sbjct: 361 EAGLDMVSALAEKTGF 376


>gi|229820848|ref|YP_002882374.1| tyrosyl-tRNA synthetase [Beutenbergia cavernae DSM 12333]
 gi|229566761|gb|ACQ80612.1| tyrosyl-tRNA synthetase [Beutenbergia cavernae DSM 12333]
          Length = 422

 Score =  252 bits (643), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 138/402 (34%), Positives = 218/402 (54%), Gaps = 21/402 (5%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L  L  RG I Q ++   L  L   G VT Y G+D +A SLH G+L  ++ +   Q  GH
Sbjct: 5   LEELDWRGLIAQSTDREALGELLDAGPVTFYGGFDPSAPSLHVGNLVLILTMRRFQLAGH 64

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN-IEKIKGIFSSFIKYGTGKTDALMLN 127
           +P+ L+GG T +IGDP    E  R + + ++    + KI+     ++ +  G T A M+N
Sbjct: 65  RPVGLVGGATGLIGDPRMSGE--RTLNAPDVVAGWVGKIRAQIEPYLDF-DGPTAARMVN 121

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W   +  ID LR++G  F +  ML+ E+V  RL  E  LSF EF+Y ILQ  D++EL
Sbjct: 122 NLDWTAPLSAIDFLRDVGKHFRLGTMLAKETVARRLASEDGLSFTEFSYQILQGMDYLEL 181

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            +  D RLQ+GG+DQWGN++ G++L  +++     ALT+PL+T   GTK GKT  G+IWL
Sbjct: 182 FRRDDVRLQLGGNDQWGNLLSGVELIRKVEGAGAHALTTPLITKPDGTKFGKTEGGSIWL 241

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKKIIATE 305
           + E+TSPY F+Q+W N  DADV  + +  T L   EI+ +  A  +     EA++ +A  
Sbjct: 242 DPELTSPYAFYQFWFNAADADVGGYLRVFTFLSREEIEALDVAVRERPGAREAQRALAAS 301

Query: 306 ITTMVHG---REEAEKAATA--------AMECFDMSIHSQHMPTISISKDEVSRGMGLLT 354
           +T +VHG   RE  E+A+ A        A++   ++     +P+  +   E +    ++ 
Sbjct: 302 VTDLVHGAQARERVERASRALFGRDDLDALDERTLADAVAELPSAPLRPGETT----IVD 357

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
            + + G  +  N ARR +      +NN  + +    + ++D 
Sbjct: 358 ALAETGLVSGRNAARRAVDEGGAYVNNVKVDDADRVLAVEDL 399


>gi|228910908|ref|ZP_04074717.1| Tyrosyl-tRNA synthetase [Bacillus thuringiensis IBL 200]
 gi|228848859|gb|EEM93704.1| Tyrosyl-tRNA synthetase [Bacillus thuringiensis IBL 200]
          Length = 420

 Score =  252 bits (643), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 147/419 (35%), Positives = 220/419 (52%), Gaps = 21/419 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG ++Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  GH P+
Sbjct: 7   LEWRGAVNQQTDEEGLRKLIEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLAGHHPV 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+GG T  IGDPS R   R++   + +Q N++ +         +G G ++  M+NN  W
Sbjct: 67  ILIGGATGTIGDPSGRQSERQLQTLEVVQHNVDALTAQMKKLFDFG-GNSEVKMVNNYDW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
              I  I+ LR+ G  FS+N ML+ + V SRL  +  +SF EF Y ILQA DF  L    
Sbjct: 126 THEINIIEFLRDYGKNFSINSMLAKDIVASRL--DTGISFTEFTYQILQAMDFHHLYTKE 183

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLK--TPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
           D +LQ+GGSDQWGNI  G+DL  +L+    K+F LT PLL  + GTK GK+  GA+WL+ 
Sbjct: 184 DVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSAGGAVWLDP 243

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN--EAKKIIATEIT 307
           E T+P+ F+Q+W N DD DV+ + K  T L    I  +A     E +  EA+K++A E+T
Sbjct: 244 EKTTPFEFYQFWVNTDDRDVIKYLKYFTFLTKERIGELAAKVEAEPHKREAQKVLAEEMT 303

Query: 308 TMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIV 357
             VHG E   +A       F   I S          + MPT   SK+  +    ++  +V
Sbjct: 304 KFVHGEEALLQAEKITAALFSGDIKSLTADEIEQGFKEMPTFQSSKETKN----IVEWLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             G   S  +AR  + + AI +N   +++    + +++      I +  GKKN+ +  L
Sbjct: 360 DLGIEPSRRQAREDINNGAISMNGEKVTDVGTDVTVENSFDGRFIIIRKGKKNYSLVKL 418


>gi|229007390|ref|ZP_04164987.1| Tyrosyl-tRNA synthetase [Bacillus mycoides Rock1-4]
 gi|228753778|gb|EEM03219.1| Tyrosyl-tRNA synthetase [Bacillus mycoides Rock1-4]
          Length = 420

 Score =  251 bits (642), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 148/419 (35%), Positives = 221/419 (52%), Gaps = 21/419 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R  I+Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  GH P+
Sbjct: 7   LEWRDAINQQTDADGLRELVEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLAGHHPV 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+GG T  IGDPS R   R++   +++Q N++ +         +G G ++  M+NN  W
Sbjct: 67  ILIGGATGTIGDPSGRQTERQLQTLEQVQHNVDALTAQMQKLFDFG-GNSEVKMVNNYDW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
              I  I+ LR+ G  FS+N ML+ + V SRL  +  +SF EF Y ILQA DF  L K  
Sbjct: 126 THQINIIEFLRDYGKNFSINSMLAKDIVASRL--DTGISFTEFTYQILQAMDFHHLYKEE 183

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLK--TPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
             +LQ+GGSDQWGNI  G+DL  +L+    K+F LT PLL  + GTK GK+  GA+WL+ 
Sbjct: 184 GVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSAGGAVWLDP 243

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM-AKLQGK-EINEAKKIIATEIT 307
           E T+P+ F+Q+W N DD DVV + K  T L    ID +  K+Q +    EA+K++A E+T
Sbjct: 244 EKTTPFEFYQFWLNTDDRDVVKYLKYFTFLTKDRIDELVVKVQTEPHKREAQKVLAEEMT 303

Query: 308 TMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIV 357
             VHG     +A       F   I S          + MPT   SK+  +    ++  +V
Sbjct: 304 KFVHGEHALSQALKITEALFSGDIKSLTADEIEQGFKDMPTFHASKETKN----IVEWLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             G   S  +AR  + + AI +N   +++    + +++      I +  GKKN+ +  L
Sbjct: 360 DLGIEPSRRQAREDINNGAISMNGEKVTDVNTHVTVENSFDERFIIIRKGKKNYSLVKL 418


>gi|268318748|ref|YP_003292404.1| hypothetical protein FI9785_253 [Lactobacillus johnsonii FI9785]
 gi|262397123|emb|CAX66137.1| tyrS [Lactobacillus johnsonii FI9785]
          Length = 420

 Score =  251 bits (642), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 149/387 (38%), Positives = 209/387 (54%), Gaps = 17/387 (4%)

Query: 5   KSDFLSILSERGFIHQISNPREL-DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           K D L  L  RG I+Q ++   L   L     +  Y G D T  SLH GHL   M++   
Sbjct: 3   KFDILEDLKWRGAINQETDEEGLRKYLVEHDDLALYCGTDPTGDSLHIGHLIPFMIMKRF 62

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q  G+ P+ L+GGGT  IGDPS R   R +  +++++ N EK+    ++ +K   G  + 
Sbjct: 63  QMAGYHPVILIGGGTGSIGDPSGRKTERVLQTAEQVKHNEEKL----TAQMKKLFGTENF 118

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            + NN  WL  +  ID LR+ G FF VN M++ + V SRL  E  +SF EF Y ILQA D
Sbjct: 119 EIKNNAEWLGKLNLIDFLRDYGKFFQVNNMINKDVVASRL--ENGISFTEFTYQILQAID 176

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTL 241
           F  L K+   +LQ+GGSDQWGNI  GIDL  +L+      F LT PL+  A GTK GK+ 
Sbjct: 177 FYHLNKDNGVQLQIGGSDQWGNITAGIDLIHKLEGADRPAFGLTIPLMLKADGTKFGKSA 236

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAK 299
            GA+WL+ E TSPY F+Q+W N DD DV+ + K  T L   EI+ +AK   KE     A+
Sbjct: 237 GGAVWLDPEKTSPYEFYQFWVNQDDRDVIKYLKYFTFLSREEIEDLAKKTEKEPWKRAAQ 296

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI------SISKDEVSRGMGLL 353
           K +A E+T  VHG E  ++A       F  ++ S  +P I      + S +       ++
Sbjct: 297 KKLAEEVTKFVHGEEGLKEAQMITEALFSGNVKSLSVPQIEQALKNAPSAEATHEPKNIV 356

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKIN 380
             +V+     S  +AR  +K+ AI +N
Sbjct: 357 EFLVETKIEPSKRQAREDVKNGAIYVN 383


>gi|319892786|ref|YP_004149661.1| Tyrosyl-tRNA synthetase [Staphylococcus pseudintermedius HKU10-03]
 gi|317162482|gb|ADV06025.1| Tyrosyl-tRNA synthetase [Staphylococcus pseudintermedius HKU10-03]
 gi|323464183|gb|ADX76336.1| tyrosyl-tRNA synthetase [Staphylococcus pseudintermedius ED99]
          Length = 420

 Score =  251 bits (642), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 143/422 (33%), Positives = 228/422 (54%), Gaps = 22/422 (5%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  LS RG ++Q ++   ++ L ++  V  Y G D TA SLH GHL   + L   Q+ G
Sbjct: 5   LLEELSWRGLVYQQTDEEGIETLLNKEEVKIYCGADPTADSLHIGHLLPYLTLRRFQEAG 64

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+PI L+GGGT +IGDPS + E R +    ++ +N+  I+        +   +   +++N
Sbjct: 65  HRPIVLVGGGTGMIGDPSGKSEERVLQTEAQVDKNVRGIQQQMEQLFDFNV-ENGPILVN 123

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  I  I+ LR+ G    VN ML  +S++SRL  E  +S+ EF Y ILQA DF  L
Sbjct: 124 NYDWLSQISLIEFLRDYGKHVGVNYMLGKDSIQSRL--ENGISYTEFTYTILQAIDFGHL 181

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERL-KTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
            + +DC+LQ+GGSDQWGNI  GI+L  R+     ++  T PL+T A G K GK+ SG IW
Sbjct: 182 NRVHDCKLQIGGSDQWGNITSGIELMRRMYGVTDVYGFTIPLVTKADGKKFGKSESGTIW 241

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIAT 304
           L+ E TSPY F+Q+W N  D DV+ F K  T L  ++I+ + K  ++   + +A+  +A 
Sbjct: 242 LDPEKTSPYEFYQFWINTSDDDVIKFLKYFTFLSKTDIEALEKSVVEEPHLRKAQTTLAE 301

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLT 354
           E+T  +HG +   +A   +   F   + S          + +P +++S +  +    ++ 
Sbjct: 302 EVTRFIHGNDALAEAQRISQALFKGDLKSLSAEEIKAGFKDVPQVTLSNETTN----IVD 357

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD-FDSTGNIKLSFGKKNHII 413
            +V+   ++S  +AR  + + AI IN     +    +   D +D T  I +  GKK + +
Sbjct: 358 ALVETKISSSKRQAREDITNGAIYINGERQQDLAYTLSSDDRYDDTFTI-IRRGKKKYFM 416

Query: 414 CH 415
            +
Sbjct: 417 VN 418


>gi|284991447|ref|YP_003410001.1| tyrosyl-tRNA synthetase [Geodermatophilus obscurus DSM 43160]
 gi|284064692|gb|ADB75630.1| tyrosyl-tRNA synthetase [Geodermatophilus obscurus DSM 43160]
          Length = 424

 Score =  251 bits (642), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 140/417 (33%), Positives = 222/417 (53%), Gaps = 13/417 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +D +S L  RG I Q ++   L    S G V  Y G+D TA SLH GHL Q  +L  LQ+
Sbjct: 2   TDVISELHRRGLIAQSTDEDALRAHLSAGPVPYYAGFDPTAPSLHVGHLLQFTVLRALQR 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT---GKTD 122
            GH+P+ L+GG T +IGDP    E R++     +   ++ I+   + F++      G   
Sbjct: 62  AGHRPVVLVGGATGLIGDPRPTAE-RQLNDRGTVAGWVDSIRTQVAPFLEVPAEREGLEA 120

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
            + ++N  W   +  ID LRE+G  F V RML+ E+V +RL  E  +S+ EF+Y ILQA 
Sbjct: 121 PVYVDNLEWTAPLSAIDFLRELGKHFRVGRMLAKEAVAARLNSEAGISYTEFSYQILQAN 180

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           D+ EL + +   LQ GGSDQWGN+  GIDL  R +   + AL++PL+T + GTK GK+  
Sbjct: 181 DYRELYRRHGVTLQTGGSDQWGNLTAGIDLVRRTEGATVHALSTPLVTKSDGTKFGKSEG 240

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA--KLQGKEINEAKK 300
           G +WL+  +T PY F+Q+W N DDAD  ++    +  P  E++ +    ++       ++
Sbjct: 241 GTVWLDPALTPPYAFFQFWLNADDADARAWLPLYSERPAEEVEALVAESVERPAARAVQR 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFD----MSIHSQHMPTISISKDEVSRGMGLLT-- 354
            +A E+T +VHG +E  +A  A    F      ++  + +         V+   G  T  
Sbjct: 301 ALAEELTRLVHGEDELRQAEAAGRALFGRDDLRALGPETLGAALREAGSVTVDGGTPTVA 360

Query: 355 -LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            L+ + G  +S +EARR +K     +NN  +++ +     +D+   G + L  GK++
Sbjct: 361 ALLQQTGLVSSLSEARRTVKEGGAYLNNERVTDAEAVPGEEDWLPGGWLVLRRGKRS 417


>gi|15827703|ref|NP_301966.1| tyrosyl-tRNA synthetase [Mycobacterium leprae TN]
 gi|221230180|ref|YP_002503596.1| tyrosyl-tRNA synthetase [Mycobacterium leprae Br4923]
 gi|13432213|sp|Q49900|SYY_MYCLE RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|2065227|emb|CAB08289.1| TyrS [Mycobacterium leprae]
 gi|13093254|emb|CAC31733.1| tyrosyl-tRNA synthase [Mycobacterium leprae]
 gi|219933287|emb|CAR71447.1| tyrosyl-tRNA synthase [Mycobacterium leprae Br4923]
          Length = 426

 Score =  251 bits (642), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 148/419 (35%), Positives = 233/419 (55%), Gaps = 21/419 (5%)

Query: 10  SILSERGFIHQISNPRELDILCSQ---GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           SIL+E G+   ++   +LD L  +   G +T Y G+D TA SLH GHL  L++L   Q+ 
Sbjct: 4   SILNELGWRGLVAQSTDLDALADELRRGPMTVYAGFDPTAPSLHVGHLVPLLVLRRFQRA 63

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMM-RSQEIQENIEKIKGIFSSFIKY---GTGKTD 122
           GH+PI L GG T +IGDP  RD   R +  +  + E  E+I+G    F+++      +  
Sbjct: 64  GHRPIVLAGGATGMIGDP--RDIGERTLNEAYTVAEWAERIRGQLERFVEFDDVAKSRNG 121

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
           A+++NN  W   +  I+ LR++G  FS+N ML  +++R RL   Q +S+ EF+YM+LQA 
Sbjct: 122 AIVVNNLEWTSPMSAIEFLRDVGKHFSINLMLDRDTIRRRLN-GQGISYTEFSYMLLQAN 180

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK-TL 241
           D+ EL + + C LQ+GGSDQWGNII G+ L  +     + ALT PL+T A G K+GK T 
Sbjct: 181 DYAELHQRHGCALQIGGSDQWGNIIAGVRLVRQKLGATVHALTVPLVTAADGAKLGKSTG 240

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AK 299
            G++WL+ EMTSPY ++QY+ N  DADV+ + +  T L   E+  + +       E  A+
Sbjct: 241 GGSLWLDPEMTSPYAWYQYFINTSDADVIRYLRWFTFLLPEELVELEQTTVSRPQERAAQ 300

Query: 300 KIIATEITTMVHGREEAEKAATAAMECF--------DMSIHSQHMPTISISKDEVSRGMG 351
           + +ATE+T +VHG    +    A+   F        D +  +  +    +++ +     G
Sbjct: 301 RRLATELTVLVHGAAATQAVEHASRALFGQGELARLDEATLATALRETVVAELKPGNPDG 360

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
           ++ L+V +G + S   ARR +    + +NN  I +E+   +  DF     + L  GK+N
Sbjct: 361 IVDLLVASGLSPSRGAARRTIDEGGVLVNNIRIQSEEWTPRTSDFLHGRWLVLRRGKRN 419


>gi|324329009|gb|ADY24269.1| tyrosyl-tRNA synthetase [Bacillus thuringiensis serovar finitimus
           YBT-020]
          Length = 419

 Score =  251 bits (642), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 144/383 (37%), Positives = 205/383 (53%), Gaps = 21/383 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I+Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  GH P+
Sbjct: 7   LEWRGAINQQTDEEGLRKLVEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLAGHHPV 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+GG T  IGDPS R   R++   + +Q N++ +         +G G ++  M+NN  W
Sbjct: 67  ILIGGATGTIGDPSGRQSERQLQTLEVVQHNVDALTAQMKKLFDFG-GNSEVKMVNNYDW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
              I  I+ LR+ G  FS+N ML+ + V SRL  +  +SF EF Y ILQA DF  L    
Sbjct: 126 THEINIIEFLRDYGKNFSINSMLAKDIVASRL--DTGISFTEFTYQILQAMDFHHLYTKE 183

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLK--TPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
           D +LQ+GGSDQWGNI  G+DL  +L+    K+F LT PLL  + GTK GK+  GA+WL+ 
Sbjct: 184 DVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSAGGAVWLDS 243

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN--EAKKIIATEIT 307
           E T+P+ F+Q+W N DD DVV + K  T L    ID +A     E +  EA+K++A E+T
Sbjct: 244 EKTTPFEFYQFWVNTDDRDVVKYLKYFTFLTKERIDELAVKVETEPHKREAQKVLAEEMT 303

Query: 308 TMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIV 357
             VHG E   +A       F   I S          + MPT   SK+  +    ++  +V
Sbjct: 304 KFVHGEEALLQAVKITAALFSGDIKSLTADEIEQGFKEMPTFQSSKETKN----IVEWLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKIN 380
             G   S  +AR  + + AI +N
Sbjct: 360 DLGIEPSRRQAREDINNGAISMN 382


>gi|304558971|gb|ADM41635.1| Tyrosyl-tRNA synthetase [Edwardsiella tarda FL6-60]
          Length = 376

 Score =  251 bits (642), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 139/376 (36%), Positives = 208/376 (55%), Gaps = 13/376 (3%)

Query: 52  GHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFS 111
           GHL  L+ L   Q+ GHKP++L+GG T +IGDPSF+   R++   + +Q  ++KI+   +
Sbjct: 2   GHLVPLLCLKRFQQAGHKPVALVGGATGLIGDPSFKATERKLNTEETVQSWVDKIRRQVA 61

Query: 112 SFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLS 170
            F+ +  G   A+  NN  W   +  +  LR+IG  FSVN+M++ E+V+ RL R+   +S
Sbjct: 62  PFLDFDCGSNSAIAANNYDWFGGMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDVGIS 121

Query: 171 FLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLT 230
           F EF+Y +LQ YDF  L + +   LQ+GGSDQWGNI  GIDL  R+   +++ LT PL+T
Sbjct: 122 FTEFSYNLLQGYDFASLNRMHGVELQIGGSDQWGNITSGIDLTRRMNQQQVWGLTVPLIT 181

Query: 231 TASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA-- 288
            A GTK GKT  GA+WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+ +   
Sbjct: 182 KADGTKFGKTEGGAVWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINALEDE 241

Query: 289 -KLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS-ISKD-- 344
            K  GK    A+ ++A  +T +VHG    E A       F  S+        + +++D  
Sbjct: 242 DKNSGK-APRAQYVLAEAVTRLVHGEAGLEAAKRITHSLFSGSLSEMTEADFAQLAQDGM 300

Query: 345 ---EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
              E+ +G  L   +V A    S  +AR+ + SNA+ +N    S+ +      D      
Sbjct: 301 PMVEMDKGADLQQALVDAELQPSRGQARKTIASNAVTVNGEKQSDPEYTFSDGDRLFGRY 360

Query: 402 IKLSFGKKNHIICHLC 417
             L  GKKN+  C +C
Sbjct: 361 TLLRRGKKNY--CLIC 374


>gi|228993787|ref|ZP_04153692.1| Tyrosyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442]
 gi|228765998|gb|EEM14647.1| Tyrosyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442]
          Length = 420

 Score =  251 bits (641), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 148/419 (35%), Positives = 221/419 (52%), Gaps = 21/419 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R  I+Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  GH P+
Sbjct: 7   LEWRDAINQQTDADGLRELVEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLAGHHPV 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+GG T  IGDPS R   R++   +++Q N++ +         +G G ++  M+NN  W
Sbjct: 67  ILIGGATGTIGDPSGRQTERQLQTLEQVQHNVDALTAQMQKLFDFG-GNSEVKMVNNYDW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
              I  I+ LR+ G  FS+N ML+ + V SRL  +  +SF EF Y ILQA DF  L K  
Sbjct: 126 THQINIIEFLRDYGKNFSINSMLAKDIVASRL--DTGISFTEFTYQILQAMDFHHLYKEE 183

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLK--TPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
             +LQ+GGSDQWGNI  G+DL  +L+    K+F LT PLL  + GTK GK+  GA+WL+ 
Sbjct: 184 GVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSAGGAVWLDP 243

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM-AKLQGK-EINEAKKIIATEIT 307
           E T+P+ F+Q+W N DD DVV + K  T L    ID +  K+Q +    EA+K++A E+T
Sbjct: 244 EKTTPFEFYQFWVNTDDRDVVKYLKYFTFLTKDRIDELVVKVQTEPHKREAQKVLAEEMT 303

Query: 308 TMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIV 357
             VHG     +A       F   I S          + MPT   SK+  +    ++  +V
Sbjct: 304 KFVHGEHALSQALKITEALFSGDIKSLTADEIEQGFKDMPTFHASKETKN----IVEWLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             G   S  +AR  + + AI +N   +++    + +++      I +  GKKN+ +  L
Sbjct: 360 DLGIEPSRRQAREDINNGAISMNGEKVTDVNTHVTVENSFDGRFIIIRKGKKNYSLVKL 418


>gi|222151653|ref|YP_002560809.1| tyrosyl-tRNA synthetase [Macrococcus caseolyticus JCSC5402]
 gi|254783616|sp|B9E7E5|SYY_MACCJ RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|222120778|dbj|BAH18113.1| tyrosyl-tRNA synthetase [Macrococcus caseolyticus JCSC5402]
          Length = 417

 Score =  251 bits (641), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 150/423 (35%), Positives = 226/423 (53%), Gaps = 21/423 (4%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S  L  L  RG I+Q ++P E++ L ++  V+ Y G D TA SLH GHL   M L   Q 
Sbjct: 3   SALLEDLRWRGLIYQETHPEEMEALLNKESVSVYCGTDPTADSLHIGHLLPFMTLKRFQA 62

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+P+ L+GG T +IGDPS R + R +    ++Q N++ I         +GT +  A+ 
Sbjct: 63  HGHRPVVLIGGATGMIGDPSGRTDERTLQTLAQVQHNVDGISKQMEQLFDFGT-ENGAIR 121

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           ++N+ WL  I  +  LR+ G    VN +L+ +S+ SRL  E  +SF EF Y ILQA DF 
Sbjct: 122 VDNKDWLGKIDLLTFLRDYGKHVGVNYLLNKDSIASRL--ETGISFTEFTYTILQAIDFG 179

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLLTTASGTKMGKTLSGA 244
            L K  + +LQ+GGSDQWGNI  G++L  R+    + + +T PL+  + G K GK+  GA
Sbjct: 180 HLNKTLNVKLQIGGSDQWGNITSGMELMRRMYGEVEAYGMTVPLVVKSDGKKFGKSEGGA 239

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE--INEAKKII 302
           +WL++  T+PY F+Q+W N  D+DV+ F K  T L   EID +      E  +  A+K +
Sbjct: 240 VWLDRTKTTPYEFYQFWINTPDSDVIKFLKYFTFLSKEEIDALETSVENEPHLRLAQKRL 299

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG----MGLLTLIVK 358
           A E+T  VH     E+A       F   + +     +  S  +V +       L+ L+++
Sbjct: 300 AEEVTKYVHDESALEEAVNITDALFKGDLKALTADQLRTSFKDVPQAKVTTTNLVELLIE 359

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF-----GKKNH-I 412
           AG + S  +AR  + + AI IN      EK+Q    +  +T  I+  F     GKK + +
Sbjct: 360 AGISPSKRQAREDITNGAISIN-----GEKVQDVAYEIVATDKIEDEFTIIRRGKKKYFM 414

Query: 413 ICH 415
           I H
Sbjct: 415 IIH 417


>gi|228999836|ref|ZP_04159408.1| Tyrosyl-tRNA synthetase [Bacillus mycoides Rock3-17]
 gi|228759778|gb|EEM08752.1| Tyrosyl-tRNA synthetase [Bacillus mycoides Rock3-17]
          Length = 420

 Score =  251 bits (641), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 148/419 (35%), Positives = 221/419 (52%), Gaps = 21/419 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R  I+Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  GH P+
Sbjct: 7   LEWRDAINQQTDVDGLRELVEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLAGHHPV 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+GG T  IGDPS R   R++   +++Q N++ +         +G G ++  M+NN  W
Sbjct: 67  ILIGGATGTIGDPSGRQTERQLQTLEQVQHNVDALTAQMQKLFDFG-GNSEVKMVNNYDW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
              I  I+ LR+ G  FS+N ML+ + V SRL  +  +SF EF Y ILQA DF  L K  
Sbjct: 126 THQINIIEFLRDYGKNFSINSMLAKDIVASRL--DTGISFTEFTYQILQAMDFHHLYKEE 183

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLK--TPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
             +LQ+GGSDQWGNI  G+DL  +L+    K+F LT PLL  + GTK GK+  GA+WL+ 
Sbjct: 184 GVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSAGGAVWLDP 243

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM-AKLQGK-EINEAKKIIATEIT 307
           E T+P+ F+Q+W N DD DVV + K  T L    ID +  K+Q +    EA+K++A E+T
Sbjct: 244 EKTTPFEFYQFWLNTDDRDVVKYLKYFTFLTKDRIDELVVKVQTEPHKREAQKVLAEEMT 303

Query: 308 TMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIV 357
             VHG     +A       F   I S          + MPT   SK+  +    ++  +V
Sbjct: 304 KFVHGEHALSQALKITEALFSGDIKSLTADEIEQGFKDMPTFHASKETKN----IVEWLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             G   S  +AR  + + AI +N   +++    + +++      I +  GKKN+ +  L
Sbjct: 360 DLGIEPSRRQAREDINNGAISMNGEKVTDVNTHVTVENSFDERFIIIRKGKKNYSLVKL 418


>gi|167462682|ref|ZP_02327771.1| tyrosyl-tRNA synthetase [Paenibacillus larvae subsp. larvae
           BRL-230010]
          Length = 420

 Score =  251 bits (640), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 149/421 (35%), Positives = 222/421 (52%), Gaps = 25/421 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R  I+Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  GH+P+
Sbjct: 7   LEWRDAINQQTDAEGLRKLVEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLFGHRPV 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+GG T  IGDPS R   R++   +++Q N+E +         +G G  +  M+NN  W
Sbjct: 67  ILIGGATGTIGDPSGRQTERQLQTLEQVQHNVEALTAQMKKLFGFG-GDNEVKMVNNYDW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
              +  +D LR+ G  FSVN ML+ + V SRL  E  +SF EF+Y ILQ+ DF  L K  
Sbjct: 126 THKMNVLDFLRDYGKNFSVNTMLAKDIVASRL--ESGISFTEFSYQILQSMDFHHLFKEE 183

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
           D +LQ+GG+DQWGNI  G+DL  + + P  K F LT PL+  A GTK GKT  GAIWL+ 
Sbjct: 184 DVQLQIGGADQWGNITSGLDLIRKKEGPDAKAFGLTIPLMLKADGTKFGKTAGGAIWLDP 243

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL----QGKEINEAKKIIATE 305
             T+P+ F+Q+W N DD DVV + K  T L    I+ +A+      GK   EA+K++A E
Sbjct: 244 AKTTPFEFYQFWVNTDDRDVVKYLKFFTFLTKEVIEELAQKVETDPGK--REAQKVLAAE 301

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTL 355
           +T  VHG E   ++       F   I            + MPT   SK+  +    ++  
Sbjct: 302 MTKFVHGEEALAQSGKITEALFSGDIKGLTADEIEQGFKDMPTFHASKESKN----IVDW 357

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +V+     S  +AR  + + AI +N   +S+   ++ +++      I +  GKKN+ +  
Sbjct: 358 LVELRIEPSKRQAREDITNGAISMNGERVSDLNTEVTVENSFDGRFIIIRKGKKNYSLVK 417

Query: 416 L 416
           L
Sbjct: 418 L 418


>gi|300172408|ref|YP_003771573.1| tyrosyl-tRNA synthetase [Leuconostoc gasicomitatum LMG 18811]
 gi|299886786|emb|CBL90754.1| Tyrosyl-tRNA synthetase [Leuconostoc gasicomitatum LMG 18811]
          Length = 415

 Score =  251 bits (640), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 149/395 (37%), Positives = 212/395 (53%), Gaps = 17/395 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG ++QI++ + L    + G + AY+G D TA SLH GHL   M+L   Q  
Sbjct: 2   NFIEDLKWRGALNQITDEKGLLDAMASGKIGAYVGTDPTADSLHLGHLIPFMVLKRFQNA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           G K + ++GG T  IGDP  R  + R + +QE  + +E  KGI +   K   G  D  ++
Sbjct: 62  GGKAVIIIGGATGAIGDP--RPTTERQLLTQE--QLVENEKGITAQVTKL-FGDNDTRIV 116

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  +   D LR+ G  FS+N ML  + V SRL  E  +SF EF Y +LQ  DF E
Sbjct: 117 NNNDWLGKLTLTDFLRDYGKLFSINVMLKKDVVASRL--ETGISFTEFTYQVLQGIDFHE 174

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLK--TPKLFALTSPLLTTASGTKMGKTLSGA 244
           L +  D +LQ+GGSDQWGNI  GIDL   L+    K F LT PL+T ++G K GK+   A
Sbjct: 175 LWRREDVKLQIGGSDQWGNITSGIDLIHSLEGNAAKAFGLTIPLMTDSTGKKFGKSEGNA 234

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKII 302
           IWL+ E TSPY F+Q+W N +DADVV + K  T L   EID +AK         EA++ +
Sbjct: 235 IWLDPEKTSPYTFYQFWLNQNDADVVKYLKYFTFLNSEEIDALAKAIDTNPGAREAQRRL 294

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRGMGLLTLI 356
           A E+T  VHG+   + A   +   F   + +     I+       S D  +    ++  +
Sbjct: 295 AQEVTKFVHGQAAVDDAEQLSKALFSGDVATLSAAQIADAFGGVPSFDITAESKNIIDFL 354

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
           V  G   S  +AR  + + AI IN   +++   +I
Sbjct: 355 VDGGVDQSKRQAREDVNNGAITINGEKVTDVATEI 389


>gi|229512527|ref|ZP_04401998.1| tyrosyl-tRNA synthetase [Vibrio cholerae TMA 21]
 gi|229350420|gb|EEO15369.1| tyrosyl-tRNA synthetase [Vibrio cholerae TMA 21]
          Length = 434

 Score =  251 bits (640), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 132/307 (42%), Positives = 183/307 (59%), Gaps = 5/307 (1%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG I Q S P E  +         Y G+D TA SLH GHL  L++L   Q  GH+ I
Sbjct: 18  LQQRGLIAQ-STPLEALVERFAMPQVLYCGFDPTAGSLHIGHLVPLLMLKRFQNAGHQAI 76

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM-LNNET 130
           +L+GG T +IGDPSF+   R +  +Q +Q+ +  +    +  +   +    +LM +NN  
Sbjct: 77  ALIGGATGMIGDPSFKANERVLNSAQTVQQWVSDLSQQITQLMASQSENCASLMTVNNAD 136

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDFVELAK 189
           W+  I  ID  R++G  FSVN M++ ESV+ RL R +Q +SF EF+Y +LQ+YDF  L +
Sbjct: 137 WIGKINLIDFFRDVGKHFSVNTMINRESVKQRLARPDQGISFTEFSYSLLQSYDFAHLNR 196

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
            + C LQ+GG+DQWGNI+ GIDL  RL   ++  LT PL+T + GTK GKT SGA+WL  
Sbjct: 197 EFGCALQIGGNDQWGNIVSGIDLTRRLNGAEVCGLTLPLITKSDGTKFGKTESGAVWLES 256

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEIT 307
             TSPY F+Q+W N DDADV  F    T L  +EI+  R A        +A++I+A  +T
Sbjct: 257 SKTSPYRFYQFWLNSDDADVYRFLAYYTFLSTAEIEEIRQADALRAGRPQAQQILAEHVT 316

Query: 308 TMVHGRE 314
             VHG E
Sbjct: 317 RFVHGEE 323


>gi|153802596|ref|ZP_01957182.1| tyrosyl-tRNA synthetase [Vibrio cholerae MZO-3]
 gi|124121859|gb|EAY40602.1| tyrosyl-tRNA synthetase [Vibrio cholerae MZO-3]
          Length = 434

 Score =  251 bits (640), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 132/307 (42%), Positives = 183/307 (59%), Gaps = 5/307 (1%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG I Q S P E  +         Y G+D TA SLH GHL  L++L   Q  GH+ I
Sbjct: 18  LQQRGLIAQ-STPLEALVERFAMPQVLYCGFDPTAGSLHIGHLVPLLMLKRFQNAGHQAI 76

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM-LNNET 130
           +L+GG T +IGDPSF+   R +  +Q +Q+ +  +    +  +   +    +LM +NN  
Sbjct: 77  ALIGGATGMIGDPSFKANERVLNSAQTVQQWVSDLSQQITQLMASQSENCASLMTVNNAD 136

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDFVELAK 189
           W+  I  ID  R++G  FSVN M++ ESV+ RL R +Q +SF EF+Y +LQ+YDF  L +
Sbjct: 137 WIGKINLIDFFRDVGKHFSVNTMINRESVKQRLARPDQGISFTEFSYSLLQSYDFAHLNR 196

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
            + C LQ+GG+DQWGNI+ GIDL  RL   ++  LT PL+T + GTK GKT SGA+WL  
Sbjct: 197 EFGCALQIGGNDQWGNIVSGIDLTRRLNGAEVCGLTLPLITKSDGTKFGKTESGAVWLES 256

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEIT 307
             TSPY F+Q+W N DDADV  F    T L  +EI+  R A        +A++I+A  +T
Sbjct: 257 SKTSPYRFYQFWLNSDDADVYRFLAYYTFLSTAEIEEIRQADALRAGRPQAQQILAEHVT 316

Query: 308 TMVHGRE 314
             VHG E
Sbjct: 317 RFVHGEE 323


>gi|153826579|ref|ZP_01979246.1| tyrosyl-tRNA synthetase [Vibrio cholerae MZO-2]
 gi|149739671|gb|EDM53885.1| tyrosyl-tRNA synthetase [Vibrio cholerae MZO-2]
          Length = 434

 Score =  251 bits (640), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 155/394 (39%), Positives = 224/394 (56%), Gaps = 27/394 (6%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTA--YIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
           L +RG I Q S P  L+ L  + V     Y G+D TA SLH GHL  L++L   Q  GH+
Sbjct: 18  LQQRGLIAQ-STP--LEALVERFVTPQVLYCGFDPTAGSLHIGHLVPLLMLKRFQNAGHQ 74

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM-LNN 128
            I+L+GG T +IGDPSF+   R +  +Q +Q+ +  +    +  +   +    +LM +NN
Sbjct: 75  AIALIGGATGMIGDPSFKANERVLNSAQTVQQWVSDLSQQITQLMASQSENCASLMTVNN 134

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDFVEL 187
             W+  I  ID   ++G  FSVN M++ ESV+ RL R +Q +SF EF+Y +LQ+YDF  L
Sbjct: 135 ADWIGKINLIDFFHDVGKHFSVNAMINRESVKQRLARPDQGISFTEFSYSLLQSYDFAHL 194

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            + + C LQ+GG+DQWGNI+ GIDL  RL   ++  LT PL+T + GTK GKT SGA+WL
Sbjct: 195 NREFGCALQIGGNDQWGNIVSGIDLTRRLNGVEVCGLTLPLITKSDGTKFGKTESGAVWL 254

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATE 305
               TSPY F+Q+W N DDADV  F    T L  +EI+  R A        +A++I+A  
Sbjct: 255 ESRKTSPYRFYQFWLNSDDADVYRFLAYYTFLSTAEIEEIRQADALRAGKPQAQQILAEH 314

Query: 306 ITTMVHGREEAEKAA---TAAMECFDMSIHS---------QHMPTISISKDEVSRGMGLL 353
           +T  VHG EE   AA   T A+   D+S  S           +P ++ S+ +       L
Sbjct: 315 VTRFVHG-EEGLAAALRITQALFSGDVSYLSLSELAQLELDGLPCVAASRTDSL-----L 368

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNE 387
            L++ +G A+S  +AR  L++ AI++N   +  E
Sbjct: 369 DLLLSSGLASSKRQAREWLENGAIRVNGERVQQE 402


>gi|97201475|sp|Q74LL0|SYY_LACJO RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
          Length = 420

 Score =  250 bits (639), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 148/387 (38%), Positives = 209/387 (54%), Gaps = 17/387 (4%)

Query: 5   KSDFLSILSERGFIHQISNPREL-DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           K D L  L  RG I+Q ++   L   L     +  Y G D T  SLH GHL   M+L   
Sbjct: 3   KFDILEDLKWRGAINQETDEEGLRKYLAEHDDLALYCGTDPTGDSLHIGHLIPFMILKRF 62

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q  G+ P+ L+GGGT  IGDPS R   R +  +++++ N EK+    ++ +K   G  + 
Sbjct: 63  QMAGYHPVILIGGGTGAIGDPSGRKTERTLQTAEQVKHNEEKL----TAQMKKLFGTENF 118

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            + NN  WL  +  +D LR+ G FF VN M++ + V SRL  E  +SF EF+Y ILQA D
Sbjct: 119 EIRNNAEWLGKMNLLDFLRDYGKFFQVNNMINKDVVASRL--ENGISFTEFSYQILQAID 176

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK--LFALTSPLLTTASGTKMGKTL 241
           F  L K+   ++Q+GGSDQWGNI  GIDL  +L       F LT PL+  A GTK GK+ 
Sbjct: 177 FYHLNKDNGVQMQIGGSDQWGNITAGIDLIHKLDGSDRPAFGLTIPLMLKADGTKFGKSA 236

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAK 299
            GA+WL+ E TSPY F+Q+W N DD DVV + K  T L   EI+ +A+   KE     A+
Sbjct: 237 GGAVWLDPEKTSPYEFYQFWINQDDRDVVKYLKYFTFLSREEIEDLAEKTEKEPWKRAAQ 296

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI------SISKDEVSRGMGLL 353
           K +A E+T  VHG E  ++A       F  ++ S  +P I      + S +       ++
Sbjct: 297 KRLAEEVTKFVHGEEGLKEAQIITEALFSGNVKSLSVPQIEQALKNAPSAEATHEAKNIV 356

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKIN 380
             +V+     S  +AR  +K+ AI +N
Sbjct: 357 EFLVETKIEPSKRQAREDVKNGAIYVN 383


>gi|42518261|ref|NP_964191.1| tyrosyl-tRNA synthetase [Lactobacillus johnsonii NCC 533]
 gi|41582545|gb|AAS08157.1| tyrosyl-tRNA synthetase [Lactobacillus johnsonii NCC 533]
          Length = 426

 Score =  250 bits (639), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 148/387 (38%), Positives = 209/387 (54%), Gaps = 17/387 (4%)

Query: 5   KSDFLSILSERGFIHQISNPREL-DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           K D L  L  RG I+Q ++   L   L     +  Y G D T  SLH GHL   M+L   
Sbjct: 9   KFDILEDLKWRGAINQETDEEGLRKYLAEHDDLALYCGTDPTGDSLHIGHLIPFMILKRF 68

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q  G+ P+ L+GGGT  IGDPS R   R +  +++++ N EK+    ++ +K   G  + 
Sbjct: 69  QMAGYHPVILIGGGTGAIGDPSGRKTERTLQTAEQVKHNEEKL----TAQMKKLFGTENF 124

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            + NN  WL  +  +D LR+ G FF VN M++ + V SRL  E  +SF EF+Y ILQA D
Sbjct: 125 EIRNNAEWLGKMNLLDFLRDYGKFFQVNNMINKDVVASRL--ENGISFTEFSYQILQAID 182

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK--LFALTSPLLTTASGTKMGKTL 241
           F  L K+   ++Q+GGSDQWGNI  GIDL  +L       F LT PL+  A GTK GK+ 
Sbjct: 183 FYHLNKDNGVQMQIGGSDQWGNITAGIDLIHKLDGSDRPAFGLTIPLMLKADGTKFGKSA 242

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAK 299
            GA+WL+ E TSPY F+Q+W N DD DVV + K  T L   EI+ +A+   KE     A+
Sbjct: 243 GGAVWLDPEKTSPYEFYQFWINQDDRDVVKYLKYFTFLSREEIEDLAEKTEKEPWKRAAQ 302

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI------SISKDEVSRGMGLL 353
           K +A E+T  VHG E  ++A       F  ++ S  +P I      + S +       ++
Sbjct: 303 KRLAEEVTKFVHGEEGLKEAQIITEALFSGNVKSLSVPQIEQALKNAPSAEATHEAKNIV 362

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKIN 380
             +V+     S  +AR  +K+ AI +N
Sbjct: 363 EFLVETKIEPSKRQAREDVKNGAIYVN 389


>gi|256848567|ref|ZP_05554008.1| tyrosyl-tRNA synthetase [Lactobacillus coleohominis 101-4-CHN]
 gi|256714619|gb|EEU29599.1| tyrosyl-tRNA synthetase [Lactobacillus coleohominis 101-4-CHN]
          Length = 417

 Score =  250 bits (639), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 154/424 (36%), Positives = 232/424 (54%), Gaps = 32/424 (7%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG ++Q+++   L  L ++  ++ Y G D T  SLH GHL   M+L   Q  GH P+
Sbjct: 7   LKWRGAVNQVTDEDGLRELTNEKQISLYCGTDPTGDSLHIGHLIPFMMLKRFQLAGHHPV 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQEN----IEKIKGIFSSFIKYGTGKTDALMLN 127
            ++GGGT  IGDPS R   R +    +++ N     E++K +F        G  +  +++
Sbjct: 67  IIIGGGTGAIGDPSGRKTERTLQTESQLEHNKKALTEQMKKLF--------GTENFTIVD 118

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N TWL  I  I+ LR+ G  F+VN ML+ E V SRL  +  +SF EF Y ILQA DF+ L
Sbjct: 119 NYTWLSKISMIEFLRDYGKLFNVNTMLNKEVVASRL--DNGISFTEFTYQILQAVDFLHL 176

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSGAI 245
            +N D +LQ+GGSDQWGNI  GIDL  +++ P  K+F LT PL+  A GTK GKT  GA+
Sbjct: 177 YRNNDVQLQIGGSDQWGNITSGIDLIHKVEGPETKVFGLTIPLMLKADGTKFGKTAGGAV 236

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIA 303
           WL+ + TSPY F+Q+W N DD DVV + K  T L   +I+ +A+   KE    EA++ +A
Sbjct: 237 WLDPKKTSPYEFYQFWLNQDDRDVVKYLKYFTFLDQDQINDLAEKVEKEPWKREAQRTLA 296

Query: 304 TEITTMVHGREEAEKAATAAMECF----------DMSIHSQHMPTISISKDEVSRGMGLL 353
            E+TT VHG    + A   +   F          D+    +  P++ IS D V+    ++
Sbjct: 297 REVTTFVHGEAATKHAEEISQLLFKGDIKDLTTEDIEQAFKSAPSVDISADVVN----IV 352

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
             +V      S  +AR  +K+ AI +N   +++ + +I   D      + +  GKK++ +
Sbjct: 353 DWLVNTNIEPSKRQAREDVKNGAITVNGEKVTDIEAEINPADHFDGKYVVVRRGKKHYTL 412

Query: 414 CHLC 417
             + 
Sbjct: 413 AKVT 416


>gi|329666572|gb|AEB92520.1| tyrosyl-tRNA synthetase [Lactobacillus johnsonii DPC 6026]
          Length = 420

 Score =  250 bits (639), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 148/387 (38%), Positives = 209/387 (54%), Gaps = 17/387 (4%)

Query: 5   KSDFLSILSERGFIHQISNPREL-DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           K D L  L  RG I+Q ++   L   L     +  Y G D T  SLH GHL   M++   
Sbjct: 3   KFDILEDLKWRGAINQETDEEGLRKYLAEHDDLALYCGTDPTGDSLHIGHLIPFMIMKRF 62

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q  G+ P+ L+GGGT  IGDPS R   R +  +++++ N EK+    ++ +K   G  + 
Sbjct: 63  QMAGYHPVILIGGGTGSIGDPSGRKTERVLQTAEQVKHNEEKL----TAQMKKLFGTENF 118

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            + NN  WL  +  ID LR+ G FF VN M++ + V SRL  E  +SF EF Y ILQA D
Sbjct: 119 EIKNNAEWLGKLNLIDFLRDYGKFFQVNNMINKDVVASRL--ENGISFTEFTYQILQAID 176

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTL 241
           F  L K+   +LQ+GGSDQWGNI  GIDL  +L+      F LT PL+  A GTK GK+ 
Sbjct: 177 FYHLNKDNGVQLQIGGSDQWGNITAGIDLIHKLEGADRPAFGLTIPLMLKADGTKFGKSA 236

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAK 299
            GA+WL+ E TSPY F+Q+W N DD DV+ + K  T L   EI+ +A+   KE     A+
Sbjct: 237 GGAVWLDPEKTSPYEFYQFWINQDDRDVIKYLKYFTFLSREEIEDLAEKTEKEPWKRAAQ 296

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI------SISKDEVSRGMGLL 353
           K +A E+T  VHG E  ++A       F  +I S  +P I      + S +       ++
Sbjct: 297 KKLAEEVTKFVHGEEGLKEAQMITEALFSGNIKSLSVPQIEQALKNAPSAEATHEAKNIV 356

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKIN 380
             +++     S  +AR  +K+ AI +N
Sbjct: 357 EFLIETKIEPSKRQAREDVKNGAIYVN 383


>gi|326382716|ref|ZP_08204407.1| tyrosyl-tRNA synthetase [Gordonia neofelifaecis NRRL B-59395]
 gi|326198835|gb|EGD56018.1| tyrosyl-tRNA synthetase [Gordonia neofelifaecis NRRL B-59395]
          Length = 423

 Score =  250 bits (639), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 146/392 (37%), Positives = 226/392 (57%), Gaps = 16/392 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + L  L  RG I Q ++  +L     +  ++ Y G+D TASSLHAGHL  L+ L   Q  
Sbjct: 4   NILDDLIWRGLIGQTTDENDLREALDK-PISLYAGFDPTASSLHAGHLVPLLTLRRFQLA 62

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQE-IQENIEKIKGIFSSFIKYGTGKTDALM 125
           GH+P+ L GG T +IGDP  RD   R M S + + +  E I G    F+        AL+
Sbjct: 63  GHRPVVLAGGATGLIGDP--RDVGERTMNSSDTVADWAENIVGQLQRFVTIDDSDNGALL 120

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  W   +  I+ LR++G  FSVN ML+ E+V+ RL+ +  +S+ EF+Y++LQ+ D++
Sbjct: 121 VNNFDWTGPMSTIEFLRDVGKHFSVNVMLARETVKRRLESD-GISYTEFSYLLLQSNDYL 179

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK-TLSGA 244
           +L + Y C LQ+GGSDQWGNII G+DL  ++      ALT PL+T+A G K GK T  G+
Sbjct: 180 QLYRKYGCVLQIGGSDQWGNIIGGVDLIRKVDGGSAHALTVPLVTSADGKKFGKSTGGGS 239

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE--INEAKKII 302
           +WL+ E+TSPY ++QY+ N  DADV+ F K  T L   EI+ + +L  ++  + EA+K +
Sbjct: 240 VWLDPELTSPYAWYQYFVNTADADVIKFLKWFTFLRREEIEELEQLTAEKPFLREAQKRL 299

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMS-IHSQHMPTISISKDEVSRG-------MGLLT 354
           A E+TT++HG ++   A  A+   F  + ++    PT++ +  E             ++ 
Sbjct: 300 AQELTTLIHGADQTAAAELASRALFGRAELNDLDEPTLAAALGETGLAEFDAGATPSIVE 359

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISN 386
           L+V +G A S   ARR +      +NN  +++
Sbjct: 360 LLVASGLADSNKAARRAVDEGGAYVNNVKVTD 391


>gi|322381916|ref|ZP_08055869.1| tyrosyl-tRNA synthetase-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
 gi|321154117|gb|EFX46440.1| tyrosyl-tRNA synthetase-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
          Length = 457

 Score =  250 bits (639), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 149/421 (35%), Positives = 222/421 (52%), Gaps = 25/421 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R  I+Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  GH+P+
Sbjct: 44  LEWRDAINQQTDAEGLRKLVEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLFGHRPV 103

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+GG T  IGDPS R   R++   +++Q N+E +         +G G  +  M+NN  W
Sbjct: 104 ILIGGATGTIGDPSGRQTERQLQTLEQVQHNVEALTAQMKKLFGFG-GDNEVKMVNNYDW 162

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
              +  +D LR+ G  FSVN ML+ + V SRL  E  +SF EF+Y ILQ+ DF  L K  
Sbjct: 163 THKMNVLDFLRDYGKNFSVNTMLAKDIVASRL--ESGISFTEFSYQILQSMDFHHLFKEE 220

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
           D +LQ+GG+DQWGNI  G+DL  + + P  K F LT PL+  A GTK GKT  GAIWL+ 
Sbjct: 221 DVQLQIGGADQWGNITSGLDLIRKKEGPDAKAFGLTIPLMLKADGTKFGKTAGGAIWLDP 280

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL----QGKEINEAKKIIATE 305
             T+P+ F+Q+W N DD DVV + K  T L    I+ +A+      GK   EA+K++A E
Sbjct: 281 AKTTPFEFYQFWVNTDDRDVVKYLKFFTFLTKEVIEELAQKVETDPGK--REAQKVLAAE 338

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTL 355
           +T  VHG E   ++       F   I            + MPT   SK+  +    ++  
Sbjct: 339 MTKFVHGEEALAQSGKITEALFSGDIKGLTADEIEQGFKDMPTFHASKESKN----IVDW 394

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +V+     S  +AR  + + AI +N   +S+   ++ +++      I +  GKKN+ +  
Sbjct: 395 LVELRIEPSKRQAREDITNGAISMNGERVSDLNTEVTVENSFDGRFIIIRKGKKNYSLVK 454

Query: 416 L 416
           L
Sbjct: 455 L 455


>gi|294628647|ref|ZP_06707207.1| tyrosyl-tRNA synthetase [Streptomyces sp. e14]
 gi|292831980|gb|EFF90329.1| tyrosyl-tRNA synthetase [Streptomyces sp. e14]
          Length = 422

 Score =  250 bits (639), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 146/423 (34%), Positives = 230/423 (54%), Gaps = 13/423 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +D +  L  RG     ++   L    + G VT Y G+D TA SLH GHL Q++ +  LQ+
Sbjct: 2   TDIVDELKWRGLFALSTDEDALRKALADGPVTFYCGFDPTAPSLHVGHLVQVLTVRRLQQ 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQE-IQENIEKIKGIFSSFIKYGTGKTDAL 124
            GH+P++L+GG T +IGDP  R  + R +   E +   +EK++     F+ +  G+  A+
Sbjct: 62  AGHRPLALVGGATGLIGDP--RPTAERTLNDPETVAGWVEKLRRQIEPFLSF-EGENAAV 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M+NN  W   +  I+ LR+IG  F VN+ML+ +SV  RL+ +Q +S+ EF+Y ILQ  DF
Sbjct: 119 MVNNLDWTEGLSAIEFLRDIGKHFRVNKMLTKDSVARRLESDQGISYTEFSYQILQGMDF 178

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT-PKLFALTSPLLTTASGTKMGKTLSG 243
           ++L + + C LQ GGSDQWGN+  G+DL  RL+    + AL +PL+T A GTK GKT  G
Sbjct: 179 LQLYRRHGCTLQQGGSDQWGNLTAGLDLIHRLEPDASVHALATPLMTKADGTKFGKTEGG 238

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT--TLPMSEIDRMAKLQGKEINEAKKI 301
           A+WL+ EMT+PY F+Q+W N+DD D+  + + L+  +    E       +  +   A++ 
Sbjct: 239 AVWLDAEMTTPYAFYQFWLNVDDRDISKYLRILSFRSREELEELERQTEERPQARAAQRA 298

Query: 302 IATEITTMVHGREE------AEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTL 355
           +A E+TT+VHG ++      A KA     E  ++   +       +   +V+    ++ L
Sbjct: 299 LAEELTTLVHGADQTAAVIAASKALFGQGELAELDERTLAAALSEVPHVQVAELGQVVDL 358

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
             + G   S + ARR +K     +NN  ++ E      +D      + L  GKKN     
Sbjct: 359 FAEVGLVASKSAARRTVKEGGAYVNNVKVTAEDAVPAREDLLHGRWLVLRRGKKNLAAVE 418

Query: 416 LCG 418
           + G
Sbjct: 419 VTG 421


>gi|326771624|ref|ZP_08230909.1| tyrosine--tRNA ligase [Actinomyces viscosus C505]
 gi|326637757|gb|EGE38658.1| tyrosine--tRNA ligase [Actinomyces viscosus C505]
          Length = 420

 Score =  250 bits (638), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 147/422 (34%), Positives = 234/422 (55%), Gaps = 27/422 (6%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +D L  L  RG I Q ++   L    S G VT Y G+D TA SLH GHL  + ++  LQ 
Sbjct: 2   TDILDELQWRGLIAQHTDIDALRAALSDGAVTFYCGFDPTAPSLHHGHLVAVKVMRHLQL 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI--------QENIEKIKGIFSSFIKYG 117
            GH+P++L+GG T +IGDP  R +  R + ++++        QE +E +           
Sbjct: 62  AGHRPLALVGGATGLIGDP--RAKGERSLNTKDVVAGWAASLQEQLENLLDF-------- 111

Query: 118 TGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYM 177
           +G   A ++NN  W  ++  ID LR++G  F +  MLS + V  RL  E+ +S+ EF+Y 
Sbjct: 112 SGDNPAQIVNNLDWTQAMSAIDFLRDLGKHFRMGTMLSKDIVARRLASEEGISYTEFSYQ 171

Query: 178 ILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
           +LQA D++EL + Y C L++GG+DQWGN++ G+DL  +++   +  +T+PL+T A GTK 
Sbjct: 172 VLQANDYLELYRRYGCTLEVGGNDQWGNLVGGMDLIHKVEGASVHVMTNPLITKADGTKF 231

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEI 295
           GK+  GAIWLN EM SPY F+Q+W  +DDADVV F K  T L   EI+R+  +  +  + 
Sbjct: 232 GKSEGGAIWLNPEMLSPYAFYQFWLQVDDADVVRFLKVFTFLEREEIERLEAVTAENPKA 291

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECF------DMSIHSQHMPTISISKDEVSRG 349
            EA++++A E+ T VHG +   +A  A    +      D+   +    T  ++  +V+ G
Sbjct: 292 REAQRVLAHEVCTWVHGADATAQAEAATSALWGRGDLADIDEATILAATADLASGDVTVG 351

Query: 350 M-GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGK 408
              ++ L+V  G     N AR+ +      INN  +++E   I  +   + G + +  G+
Sbjct: 352 QTTIVDLLVGTGLERGRNAARKTIAGGGAYINNVKVADETAVIGPEHLLAGGVVLVRKGR 411

Query: 409 KN 410
           +N
Sbjct: 412 RN 413


>gi|325125059|gb|ADY84389.1| Tyr-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus
           2038]
          Length = 421

 Score =  250 bits (638), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 153/424 (36%), Positives = 218/424 (51%), Gaps = 19/424 (4%)

Query: 7   DFLSILSERGFIHQISNPREL-DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           D L  L  RG I+Q ++   L D L     +  Y G D T  SLH GHL   M+L   Q 
Sbjct: 5   DILEDLKWRGAINQETDEEGLRDYLAKHDDLALYCGTDPTGDSLHIGHLIPFMILKRFQL 64

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            G+KP+ ++GGGT  IGDPS R   R +   + I+ N E +            G  +  +
Sbjct: 65  AGYKPVIVIGGGTGSIGDPSGRSTERVLQSEETIKHNEEALTAQMVKLF----GTENFRI 120

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  WL  +  ++ LR+ G  F VN ML+ E V SRL  E  +SF EF+Y ILQA DF 
Sbjct: 121 VNNRDWLGKMNLLEFLRDYGKLFQVNNMLNKEVVASRL--ENGISFTEFSYQILQAIDFY 178

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK--LFALTSPLLTTASGTKMGKTLSG 243
            L +++  ++Q+GG+DQWGNI  GIDL  RL+      F LT PL+  A GTK GK+  G
Sbjct: 179 ILNRDHGVQMQIGGADQWGNITAGIDLIHRLEGADRPAFGLTIPLMLKADGTKFGKSAGG 238

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKI 301
           A+WL+ E TSPY F+Q+W N DD DV+ + K  T L   EID + +    E    EA+K 
Sbjct: 239 AVWLDPEKTSPYEFYQFWINQDDRDVIKYLKYFTFLKHEEIDALEEKVKTEPWKREAQKR 298

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISI------SKDEVSRGMGLLTL 355
           +A E+T  VHG E  ++A T     F  ++       + I      S +  +    L+  
Sbjct: 299 LAEEVTKFVHGEEGLKEAQTVTEALFSGNVKDLTTKQVEIALAKAPSAESGAEKKNLVDF 358

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK-LQDFDSTGNIKLSFGKKNHIIC 414
           +V     +S  +AR  + + AI +N   I +   ++     FD    I +  GKK + + 
Sbjct: 359 LVDTKIESSKRQAREDVNNGAIYVNGDRIQDTDFEVDPAAAFDGKFVI-IRKGKKKYTLV 417

Query: 415 HLCG 418
           H+ G
Sbjct: 418 HIKG 421


>gi|227888973|ref|ZP_04006778.1| tyrosine--tRNA ligase [Lactobacillus johnsonii ATCC 33200]
 gi|227850561|gb|EEJ60647.1| tyrosine--tRNA ligase [Lactobacillus johnsonii ATCC 33200]
          Length = 420

 Score =  250 bits (638), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 148/387 (38%), Positives = 209/387 (54%), Gaps = 17/387 (4%)

Query: 5   KSDFLSILSERGFIHQISNPREL-DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           K D L  L  RG I+Q ++   L   L     +  Y G D T  SLH GHL   M++   
Sbjct: 3   KFDILEDLKWRGAINQETDEEGLRKYLAEHDDLALYCGTDPTGDSLHIGHLIPFMIMKRF 62

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q  G+ P+ L+GGGT  IGDPS R   R +  +++++ N EK+    ++ +K   G  + 
Sbjct: 63  QMAGYHPVILIGGGTGSIGDPSGRKTERVLQTAEQVKHNEEKL----TAQMKKLFGTENF 118

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            + NN  WL  +  ID LR+ G FF VN M++ + V SRL  E  +SF EF Y ILQA D
Sbjct: 119 EIKNNAEWLGKLNLIDFLRDYGKFFQVNNMINKDVVASRL--ENGISFTEFTYQILQAID 176

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTL 241
           F  L K+   +LQ+GGSDQWGNI  GIDL  +L+      F LT PL+  A GTK GK+ 
Sbjct: 177 FYHLNKDNGVQLQIGGSDQWGNITAGIDLIHKLEGADRPAFGLTIPLMLKADGTKFGKSA 236

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAK 299
            GA+WL+ E TSPY F+Q+W N DD DV+ + K  T L   EI+ +A+   KE     A+
Sbjct: 237 GGAVWLDPEKTSPYEFYQFWINQDDRDVIKYLKYFTFLSREEIEDLAEKTEKEPWKRAAQ 296

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI------SISKDEVSRGMGLL 353
           K +A E+T  VHG E  ++A       F  ++ S  +P I      + S +       ++
Sbjct: 297 KKLAEEVTKFVHGEEGLKEAQMITEALFSGNVKSLSVPQIEQALKNAPSAEVTHEAKNIV 356

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKIN 380
             +V+     S  +AR  +K+ AI +N
Sbjct: 357 EFLVETKIEPSKRQAREDVKNGAIYVN 383


>gi|163839558|ref|YP_001623963.1| tyrosyl-tRNA synthetase [Renibacterium salmoninarum ATCC 33209]
 gi|162953034|gb|ABY22549.1| tyrosyl-tRNA synthetase [Renibacterium salmoninarum ATCC 33209]
          Length = 465

 Score =  250 bits (638), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 144/387 (37%), Positives = 215/387 (55%), Gaps = 11/387 (2%)

Query: 15  RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLM 74
           RG +   ++  EL+   S   VT Y G+D TA+SLH GHL QL+L+  LQ  GHKP++L+
Sbjct: 54  RGLVQVSTDQAELEKALSTETVTYYCGFDPTAASLHLGHLVQLLLMRRLQLAGHKPLALV 113

Query: 75  GGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCS 134
           GG T +IGDP    E R M   +++ E +  I+     F+ +  G+  A M+NN  W   
Sbjct: 114 GGSTGLIGDPRPTTE-RSMQTKEQVAEWVADIQAQVQPFLSF-EGENAARMVNNLDWTAP 171

Query: 135 IKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCR 194
           +  ID LREIG  + V  M+  + V SRL  ++ +S+ EF+Y ILQ  DF+ L + Y C 
Sbjct: 172 MSAIDFLREIGKHYRVGTMIKKDIVASRLNSDEGISYAEFSYQILQGLDFLSLYRQYGCT 231

Query: 195 LQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSP 254
           LQ GGSDQWGN+  G +L  + +   + A+ +PL+T + GTK GK+   AIWLN  MTSP
Sbjct: 232 LQSGGSDQWGNLTSGTELIRKAEGGAVHAIGTPLITNSDGTKFGKSEGNAIWLNPAMTSP 291

Query: 255 YNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATEITTMVHG 312
           Y F+Q+W N  D+DVV   K  T    +EI  + K   +  +E  A+K +A E+ ++VHG
Sbjct: 292 YEFYQFWLNTADSDVVERLKIFTFRSRAEIAELEKATAERPHERTAQKALAWEVNSLVHG 351

Query: 313 REEAEKAATAAMECF-DMSIHSQHMPTISISKDEVSRG------MGLLTLIVKAGFATST 365
               EK   A+   F +  +      T+S +  E+ R       +G++ L+V  G   S 
Sbjct: 352 ITATEKVIAASAAIFGNGELSELDEATLSAATAELPRATVPASTLGIVELLVATGLVESN 411

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIK 392
           + ARR +      +NN+ I + +  I+
Sbjct: 412 SAARRTISDGGAYVNNTKILDAEYVIE 438


>gi|229175765|ref|ZP_04303271.1| Tyrosyl-tRNA synthetase [Bacillus cereus MM3]
 gi|228607716|gb|EEK65032.1| Tyrosyl-tRNA synthetase [Bacillus cereus MM3]
          Length = 420

 Score =  250 bits (638), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 143/383 (37%), Positives = 205/383 (53%), Gaps = 21/383 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG ++Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  GH P+
Sbjct: 7   LEWRGAVNQQTDEEGLRKLVEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLAGHHPV 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+GG T  IGDPS R   R++   + +Q N++ +         +G G ++  M+NN  W
Sbjct: 67  ILIGGATGTIGDPSGRQSERQLQTLEVVQHNVDALTAQMKKLFDFG-GNSEVKMVNNYDW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
              I  I+ LR+ G  FS+N ML+ + V SRL  +  +SF EF Y ILQA DF  L    
Sbjct: 126 THEINIIEFLRDYGKNFSINSMLAKDIVASRL--DTGISFTEFTYQILQAMDFHHLYTKE 183

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLK--TPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
           D +LQ+GGSDQWGNI  G+DL  +L+    K+F LT PLL  + GTK GK+  GA+WL+ 
Sbjct: 184 DVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSAGGAVWLDP 243

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN--EAKKIIATEIT 307
           E T+P+ F+Q+W N DD DVV + K  T L    ID +A     E +  EA+K++A E+T
Sbjct: 244 EKTTPFEFYQFWVNTDDRDVVKYLKYFTFLTKERIDELAVKVETEPHRREAQKVLAEEMT 303

Query: 308 TMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIV 357
             VHG E   +A       F   I S          + MPT   SK+  +    ++  +V
Sbjct: 304 KFVHGAEALLQAEKITAALFSGDIKSLTADEIEQGFKEMPTFQSSKETKN----IVEWLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKIN 380
             G   S  +AR  + + AI +N
Sbjct: 360 DLGIEPSRRQAREDINNGAISMN 382


>gi|199599074|ref|ZP_03212480.1| Tyrosyl-tRNA synthetase [Lactobacillus rhamnosus HN001]
 gi|199590037|gb|EDY98137.1| Tyrosyl-tRNA synthetase [Lactobacillus rhamnosus HN001]
          Length = 423

 Score =  249 bits (637), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 146/392 (37%), Positives = 211/392 (53%), Gaps = 31/392 (7%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L  L  RG ++Q+++   L  L  +  V+ Y G D T  SLH GHL   M+L   Q  GH
Sbjct: 10  LDELKWRGALNQLTDESGLRKLTEEKAVSVYCGTDPTGDSLHVGHLIPFMILKRFQLMGH 69

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           +P+ L+GGGT  IGDPS R+  R +   + I  N +K+     +      G  D  +++N
Sbjct: 70  RPVILIGGGTGSIGDPSGRNSERVLQTMETIATNKKKLTAQMENLF----GTDDFRIVDN 125

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL  I  +D LR+ G  FSVN ML+ E V SRL  E  +S+ EF Y ILQ+ DF+ L 
Sbjct: 126 YDWLSKISMLDFLRDYGKLFSVNNMLNKEVVASRL--ETGISYTEFTYQILQSVDFLHLF 183

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSGAIW 246
           K+ D +LQ+GG+DQWGNI  GIDL  RL+ P  + + LT+PL+  A GTK GK+  GA+W
Sbjct: 184 KHEDVQLQIGGADQWGNITAGIDLIHRLEGPDARAYGLTNPLMLKADGTKFGKSAGGAVW 243

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKKIIAT 304
           L+ E TSPY F+Q+W N DDADV  F K  T L   EI  +  A     E   A++ +A 
Sbjct: 244 LDPEKTSPYEFYQFWFNQDDADVEKFLKFFTFLSRDEIAELVEATKTHPEKRAAQRELAR 303

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGM-------------G 351
            +T  VHG++  ++A + +   F   +         +S D++ +G               
Sbjct: 304 AVTKFVHGQKAVDQAESISAALFSGDV-------ADLSADDIKQGFKQFPTVEAPQTAEN 356

Query: 352 LLTLIVK-AGFATSTNEARRHLKSNAIKINNS 382
           ++T +V       S  +AR  +++ AI IN +
Sbjct: 357 IVTWLVDTTKIEPSRRQAREDIQNGAITINGT 388


>gi|258540208|ref|YP_003174707.1| tyrosyl-tRNA synthetase [Lactobacillus rhamnosus Lc 705]
 gi|257151884|emb|CAR90856.1| Tyrosyl-tRNA synthetase [Lactobacillus rhamnosus Lc 705]
          Length = 423

 Score =  249 bits (637), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 146/396 (36%), Positives = 212/396 (53%), Gaps = 31/396 (7%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           +   L  L  RG ++Q+++   L  L  +  V+ Y G D T  SLH GHL   M+L   Q
Sbjct: 6   RGQILDELKWRGALNQLTDEAGLRKLTEEKAVSVYCGTDPTGDSLHVGHLIPFMILKRFQ 65

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GH+P+ L+GGGT  IGDPS R+  R +   + I  N +K+     +      G  D  
Sbjct: 66  LMGHRPVILIGGGTGSIGDPSGRNSERVLQTMETIATNKKKLTAQMENLF----GTDDFR 121

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           +++N  WL  I  +D LR+ G  FSVN ML+ E V SRL  E  +S+ EF Y ILQ+ DF
Sbjct: 122 IVDNYDWLSKISMLDFLRDYGKLFSVNNMLNKEVVASRL--ETGISYTEFTYQILQSVDF 179

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLS 242
           + L K+ D +LQ+GG+DQWGNI  GIDL  RL+ P  + + LT+PL+  A GTK GK+  
Sbjct: 180 LHLFKHEDVQLQIGGADQWGNITAGIDLIHRLEGPDARAYGLTNPLMLKADGTKFGKSAG 239

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKK 300
           GA+WL+ E TSPY F+Q+W N DDADV  F K  T L   EI  +  A     E   A++
Sbjct: 240 GAVWLDPEKTSPYEFYQFWFNQDDADVEKFLKFFTFLSRDEIAELVEATKTHPEKRAAQR 299

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGM---------- 350
            +A  +T  VHG++  ++A + +   F   +         +S D++ +G           
Sbjct: 300 ELARAVTKFVHGQKAVDQAESISAALFSGDV-------ADLSADDIKQGFKQFPTVEAPQ 352

Query: 351 ---GLLTLIVK-AGFATSTNEARRHLKSNAIKINNS 382
               ++T +V       S  +AR  +++ AI IN +
Sbjct: 353 TAENIVTWLVDTTKIEPSRRQAREDIQNGAITINGT 388


>gi|307107938|gb|EFN56179.1| hypothetical protein CHLNCDRAFT_48743 [Chlorella variabilis]
          Length = 440

 Score =  249 bits (637), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 137/426 (32%), Positives = 224/426 (52%), Gaps = 39/426 (9%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D ++ L  RG +  +++P +L  + +Q  + AY G+D TA SLH G+L  +++L W Q+ 
Sbjct: 39  DVVAALRSRGLLQDVTSP-DLAAVSTQEQLLAYCGFDPTAESLHLGNLLGIIVLAWFQRC 97

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY--GTGKTDAL 124
           GH+P++L+GG T  +GDPS +   R ++  + I+ N+  I+    + ++   G+G  + L
Sbjct: 98  GHRPVALLGGATGRVGDPSGKSAERPVLSEKVIERNVAGIERTLRTLLQPPPGSGLPEPL 157

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           +LNN  W   +  +  LREIG +  V  ML+ ESVR R++ +  +S+ EF Y +LQ YDF
Sbjct: 158 VLNNLDWFGGMGLLTFLREIGKYARVGTMLAKESVRKRMESDTGISYTEFTYQLLQGYDF 217

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           V + + Y  R+Q                         F LT PLL  A G+K GK+ SGA
Sbjct: 218 VHMRRQYGVRVQE----------------------PCFGLTFPLLLKADGSKFGKSESGA 255

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM-AKLQ--GKEINEAKKI 301
           +WLN +M SPY F+Q+     DADV+ F + LT LP+ EI+ + A +Q  G   N A++ 
Sbjct: 256 LWLNGDMMSPYQFYQFLFKTADADVLKFLRMLTFLPLEEIEALGASMQSPGYVANTAQRR 315

Query: 302 IATEITTMVHGREEAEKA----------ATAAMECFDMSIHSQHMPTISISKDEVSRGMG 351
           +A E+T  VHG E   +A          A   ++   +   +   P+ S+ +D+V  G  
Sbjct: 316 LAEEVTRFVHGEEGLRQALKATEALAPGAATKLDADSLEAAAGDAPSASLPRDQVV-GAP 374

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           L  ++V  G   S    RR +K   +++NN  + +E   +   D      + ++ GKKN 
Sbjct: 375 LADVMVAVGMQPSKAAVRRMIKGGGVRVNNEKVDDELAALGEDDLIDGRLVLIAAGKKNK 434

Query: 412 IICHLC 417
           ++  + 
Sbjct: 435 MLVRVA 440


>gi|258509012|ref|YP_003171763.1| tyrosyl-tRNA synthetase [Lactobacillus rhamnosus GG]
 gi|257148939|emb|CAR87912.1| Tyrosyl-tRNA synthetase [Lactobacillus rhamnosus GG]
 gi|259650304|dbj|BAI42466.1| tyrosyl-tRNA synthetase [Lactobacillus rhamnosus GG]
          Length = 423

 Score =  249 bits (637), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 146/392 (37%), Positives = 210/392 (53%), Gaps = 31/392 (7%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L  L  RG ++Q+++   L  L  +  V+ Y G D T  SLH GHL   M+L   Q  GH
Sbjct: 10  LDELKWRGALNQLTDEAGLRKLTEEKAVSVYCGTDPTGDSLHVGHLIPFMILKRFQLMGH 69

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           +P+ L+GGGT  IGDPS R+  R +   + I  N +K+     +      G  D  +++N
Sbjct: 70  RPVILIGGGTGSIGDPSGRNSERVLQTMETIATNKKKLTAQMENLF----GTDDFRIVDN 125

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL  I  +D LR+ G  FSVN ML+ E V SRL  E  +S+ EF Y ILQ+ DF+ L 
Sbjct: 126 YDWLSKISMLDFLRDYGKLFSVNNMLNKEVVASRL--ETGISYTEFTYQILQSVDFLHLF 183

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSGAIW 246
           K+ D +LQ+GG+DQWGNI  GIDL  R + P  + + LT+PL+  A GTK GK+  GA+W
Sbjct: 184 KHEDVQLQIGGADQWGNITAGIDLIHRFEGPDARAYGLTNPLMLKADGTKFGKSAGGAVW 243

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKKIIAT 304
           L+ E TSPY F+Q+W N DDADV  F K  T L   EI  +  A     E   A++ +A 
Sbjct: 244 LDPEKTSPYEFYQFWFNQDDADVEKFLKFFTFLSRDEIAELVEATKTHPEKRAAQRELAR 303

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGM-------------G 351
            +T  VHG++  ++A + +   F   +         +S D++ +G               
Sbjct: 304 AVTKFVHGQKAVDQAESISAALFSGDV-------ADLSADDIKKGFKQFPTVEAPQTAEN 356

Query: 352 LLTLIVK-AGFATSTNEARRHLKSNAIKINNS 382
           ++T +V       S  +AR  +++ AI IN S
Sbjct: 357 IVTWLVDTTKIEPSRRQAREDIQNGAITINGS 388


>gi|229553183|ref|ZP_04441908.1| tyrosine--tRNA ligase [Lactobacillus rhamnosus LMS2-1]
 gi|229313479|gb|EEN79452.1| tyrosine--tRNA ligase [Lactobacillus rhamnosus LMS2-1]
          Length = 429

 Score =  249 bits (637), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 146/396 (36%), Positives = 212/396 (53%), Gaps = 31/396 (7%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           +   L  L  RG ++Q+++   L  L  +  V+ Y G D T  SLH GHL   M+L   Q
Sbjct: 12  RGQILDELKWRGALNQLTDEAGLRKLTEEKAVSVYCGTDPTGDSLHVGHLIPFMILKRFQ 71

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GH+P+ L+GGGT  IGDPS R+  R +   + I  N +K+     +      G  D  
Sbjct: 72  LMGHRPVILIGGGTGSIGDPSGRNSERVLQTMETIATNKKKLTAQMENLF----GTDDFR 127

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           +++N  WL  I  +D LR+ G  FSVN ML+ E V SRL  E  +S+ EF Y ILQ+ DF
Sbjct: 128 IVDNYDWLSKISMLDFLRDYGKLFSVNNMLNKEVVASRL--ETGISYTEFTYQILQSVDF 185

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLS 242
           + L K+ D +LQ+GG+DQWGNI  GIDL  RL+ P  + + LT+PL+  A GTK GK+  
Sbjct: 186 LHLFKHEDVQLQIGGADQWGNITAGIDLIHRLEGPDARAYGLTNPLMLKADGTKFGKSAG 245

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKK 300
           GA+WL+ E TSPY F+Q+W N DDADV  F K  T L   EI  +  A     E   A++
Sbjct: 246 GAVWLDPEKTSPYEFYQFWFNQDDADVEKFLKFFTFLSRDEIAELVEATKTHPEKRAAQR 305

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGM---------- 350
            +A  +T  VHG++  ++A + +   F   +         +S D++ +G           
Sbjct: 306 ELARAVTKFVHGQKAVDQAESISAALFSGDV-------ADLSADDIKQGFKQFPTVEAPQ 358

Query: 351 ---GLLTLIVK-AGFATSTNEARRHLKSNAIKINNS 382
               ++T +V       S  +AR  +++ AI IN +
Sbjct: 359 TAENIVTWLVDTTKIEPSRRQAREDIQNGAITINGT 394


>gi|300813166|ref|ZP_07093541.1| tyrosine--tRNA ligase [Lactobacillus delbrueckii subsp. bulgaricus
           PB2003/044-T3-4]
 gi|300495850|gb|EFK30997.1| tyrosine--tRNA ligase [Lactobacillus delbrueckii subsp. bulgaricus
           PB2003/044-T3-4]
 gi|325684851|gb|EGD26998.1| tyrosine--tRNA ligase [Lactobacillus delbrueckii subsp. lactis DSM
           20072]
          Length = 421

 Score =  249 bits (637), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 153/424 (36%), Positives = 218/424 (51%), Gaps = 19/424 (4%)

Query: 7   DFLSILSERGFIHQISNPREL-DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           D L  L  RG I+Q ++   L D L     +  Y G D T  SLH GHL   M+L   Q 
Sbjct: 5   DILEDLKWRGAINQETDEEGLRDYLAKHDDLALYCGTDPTGDSLHIGHLIPFMILKRFQL 64

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            G+KP+ ++GGGT  IGDPS R   R +   + I+ N E +            G  +  +
Sbjct: 65  AGYKPVIVIGGGTGSIGDPSGRSTERVLQSEETIKHNEEALTAQMVKLF----GTENFRI 120

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  WL  +  ++ LR+ G  F VN ML+ E V SRL  E  +SF EF+Y ILQA DF 
Sbjct: 121 VNNRDWLGKMTLLEFLRDYGKLFQVNNMLNKEVVASRL--ENGISFTEFSYQILQAIDFY 178

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK--LFALTSPLLTTASGTKMGKTLSG 243
            L +++  ++Q+GG+DQWGNI  GIDL  RL+      F LT PL+  A GTK GK+  G
Sbjct: 179 ILNRDHGVQMQIGGADQWGNITAGIDLIHRLEGADRPAFGLTIPLMLKADGTKFGKSAGG 238

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKI 301
           A+WL+ E TSPY F+Q+W N DD DV+ + K  T L   EID + +    E    EA+K 
Sbjct: 239 AVWLDPEKTSPYEFYQFWINQDDRDVIKYLKYFTFLNHEEIDALEEKVKTEPWKREAQKR 298

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISI------SKDEVSRGMGLLTL 355
           +A E+T  VHG E  ++A T     F  ++       + I      S +  +    L+  
Sbjct: 299 LAEEVTKFVHGEEGLKEAQTVTEALFSGNVKDLTTKQVEIALAKAPSAESGAEKKNLVDF 358

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK-LQDFDSTGNIKLSFGKKNHIIC 414
           +V     +S  +AR  + + AI +N   I +   ++     FD    I +  GKK + + 
Sbjct: 359 LVDTKIESSKRQAREDVNNGAIYVNGDRIQDTDFEVDPAAAFDGKFVI-IRKGKKKYTLV 417

Query: 415 HLCG 418
           H+ G
Sbjct: 418 HIKG 421


>gi|261408561|ref|YP_003244802.1| tyrosyl-tRNA synthetase [Paenibacillus sp. Y412MC10]
 gi|261285024|gb|ACX66995.1| tyrosyl-tRNA synthetase [Paenibacillus sp. Y412MC10]
          Length = 419

 Score =  249 bits (637), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 148/420 (35%), Positives = 220/420 (52%), Gaps = 21/420 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R  I+Q ++   L  L ++  ++ Y G D T  S+H GHL   ++L   Q  GH+P+
Sbjct: 7   LEWRDAINQQTDAEGLRELTNEKSISLYCGVDPTGDSMHIGHLIPFIMLKRFQLAGHRPV 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+GG T  IGDPS R   R +   +++Q N++ + G          G     M+NN  W
Sbjct: 67  ILIGGATGTIGDPSGRQTERSLQTLEQVQANVDALTGQMKKLF-VTEGDNQIRMVNNYDW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
              I  I+ LR+ G  FS+N ML+ + V SRL  +  +SF EF+Y ILQ+ D++ L ++ 
Sbjct: 126 THKINIIEFLRDYGKNFSINSMLAKDVVASRL--DSGISFTEFSYQILQSVDYLHLYQHE 183

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
           D +LQ+GGSDQWGNI  G+DL  + + P  K F LT PL+  A GTK GKT  GAIWL+ 
Sbjct: 184 DVQLQIGGSDQWGNITSGLDLIRKKEGPEAKAFGLTIPLMLKADGTKFGKTAGGAIWLDP 243

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA-KLQGK-EINEAKKIIATEIT 307
             T+P+ F+Q+W N DD DVV + K  T L   +ID +A K+Q +    EA+K +A E+T
Sbjct: 244 NKTTPFEFYQFWANTDDRDVVKYLKYFTFLTKEQIDELAEKVQSEPHKREAQKTLAEEMT 303

Query: 308 TMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIV 357
             VHG E  E+A       F   I S          + MPT   + +  +    ++  +V
Sbjct: 304 RFVHGEEMLEQAKRITAALFSGDIKSLTADEIEQGFKEMPTFEATPETKN----IVDWLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
             G   S  +AR  +   AI +N   +S+   ++          I +  GKKN+ +  + 
Sbjct: 360 DLGIEPSKRQAREDITKGAISMNGERVSDLDHEVTADQAIGGRFIIIRKGKKNYSLVKMS 419


>gi|116513427|ref|YP_812333.1| tyrosyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC BAA-365]
 gi|122275803|sp|Q04CC7|SYY_LACDB RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|116092742|gb|ABJ57895.1| tyrosyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC BAA-365]
          Length = 421

 Score =  249 bits (637), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 153/424 (36%), Positives = 217/424 (51%), Gaps = 19/424 (4%)

Query: 7   DFLSILSERGFIHQISNPREL-DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           D L  L  RG I+Q ++   L D L     +  Y G D T  SLH GHL   M+L   Q 
Sbjct: 5   DILEDLKWRGAINQETDEEGLRDYLAKHDDLALYCGTDPTGDSLHIGHLIPFMILKRFQL 64

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            G+KP+ ++GGGT  IGDPS R   R +   + I+ N E +            G  +  +
Sbjct: 65  AGYKPVIVIGGGTGSIGDPSGRSTERVLQSEETIKHNEEALTAQMVKLF----GTENFRI 120

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  WL  +  ++ LR+ G  F VN ML+ E V SRLK    +SF EF+Y ILQA DF 
Sbjct: 121 VNNRDWLGKMNLLEFLRDYGKLFQVNNMLNKEVVASRLK--NGISFTEFSYQILQAIDFY 178

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK--LFALTSPLLTTASGTKMGKTLSG 243
            L +++  ++Q+GG+DQWGNI  GIDL  RL+      F LT PL+  A GTK GK+  G
Sbjct: 179 ILNRDHGVQMQIGGADQWGNITAGIDLIHRLEGADRPAFGLTIPLMLKADGTKFGKSAGG 238

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKI 301
           A+WL+ E TSPY F+Q+W N DD DV+ + K  T L   EID + +    E    EA+K 
Sbjct: 239 AVWLDPEKTSPYEFYQFWINQDDRDVIKYLKYFTFLKHEEIDALEEKVKTEPWKREAQKR 298

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISI------SKDEVSRGMGLLTL 355
           +A E+T  VHG E  ++A T     F  ++       + I      S +       L+  
Sbjct: 299 LAEEVTKFVHGEEGLKEAQTVTEALFSGNVKDLTTKQVEIALAKAPSAESGEEKKNLVDF 358

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK-LQDFDSTGNIKLSFGKKNHIIC 414
           +V     +S  +AR  + + AI +N   I +   ++     FD    I +  GKK + + 
Sbjct: 359 LVDTKIESSKRQAREDVNNGAIYVNGDRIQDTDFEVDPAAAFDGKFVI-IRKGKKKYTLV 417

Query: 415 HLCG 418
           H+ G
Sbjct: 418 HIKG 421


>gi|251795542|ref|YP_003010273.1| tyrosyl-tRNA synthetase [Paenibacillus sp. JDR-2]
 gi|247543168|gb|ACT00187.1| tyrosyl-tRNA synthetase [Paenibacillus sp. JDR-2]
          Length = 419

 Score =  249 bits (637), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 150/420 (35%), Positives = 218/420 (51%), Gaps = 21/420 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R  I+Q ++   L  L S+  V+ Y G D T  S+H GHL   M+L   Q  GH+P+
Sbjct: 7   LEWRDAINQQTDAEGLRELTSEKAVSLYCGVDPTGDSMHIGHLIPFMVLKRFQLAGHRPV 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+GG T  IGDPS R   R +   ++I+ N+E +            G  +  M+NN  W
Sbjct: 67  ILIGGATGTIGDPSGRTSERSLQTLEQIEANVEALGAQLRKLF-LTEGDNNMRMVNNYDW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
              I  I+ LR+ G  FS+N ML+ + V SRL  E  +SF EF+Y ILQ+ DF+ L +  
Sbjct: 126 THKINVIEFLRDYGKNFSINTMLAKDVVSSRL--ESGISFTEFSYQILQSLDFLHLFREE 183

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLK--TPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
           D +LQ+GGSDQWGNI  G+DL  + +    K F LT PL+  A GTK GKT  GAIWL+ 
Sbjct: 184 DVQLQIGGSDQWGNITSGLDLIRKKEGSESKAFGLTIPLMLKADGTKFGKTAGGAIWLDP 243

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN--EAKKIIATEIT 307
           E T+PY F+Q+W N DD DVV + K  T L   EI+ +A+    E +  EA+K +A E+T
Sbjct: 244 EKTTPYEFYQFWANTDDRDVVKYLKYFTFLSKEEIEGLAEKVATEPHKREAQKKLAEEMT 303

Query: 308 TMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIV 357
             VH  E  ++A       F   I S          + MPT     +  +    ++  +V
Sbjct: 304 RFVHSEELLQQALRITAALFSGDIKSLSADEIEQGFKEMPTF----ESTNEAKNIVDWLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
             G   S  +AR  + + AI +N   +++  L++  +       I +  GKK + +  + 
Sbjct: 360 DLGIEPSKRQAREDITNGAISMNGERVTDLTLEVSSEHAIGGRFIIIRKGKKKYSLVKMA 419


>gi|329925452|ref|ZP_08280344.1| tyrosine--tRNA ligase [Paenibacillus sp. HGF5]
 gi|328939832|gb|EGG36171.1| tyrosine--tRNA ligase [Paenibacillus sp. HGF5]
          Length = 419

 Score =  249 bits (637), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 148/420 (35%), Positives = 220/420 (52%), Gaps = 21/420 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R  I+Q ++   L  L ++  ++ Y G D T  S+H GHL   ++L   Q  GH+P+
Sbjct: 7   LEWRDAINQQTDAEGLRELTNEKSISLYCGVDPTGDSMHIGHLIPFIMLKRFQLAGHRPV 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+GG T  IGDPS R   R +   +++Q N++ + G          G     M+NN  W
Sbjct: 67  ILIGGATGTIGDPSGRQTERSLQTLEQVQANVDALTGQMKKLF-VTEGDNQIRMVNNYDW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
              I  I+ LR+ G  FS+N ML+ + V SRL  +  +SF EF+Y ILQ+ D++ L ++ 
Sbjct: 126 THKINIIEFLRDYGKNFSINSMLAKDVVASRL--DSGISFTEFSYQILQSVDYLHLYQHE 183

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
           D +LQ+GGSDQWGNI  G+DL  + + P  K F LT PL+  A GTK GKT  GAIWL+ 
Sbjct: 184 DVQLQIGGSDQWGNITSGLDLIRKKEGPEAKAFGLTIPLMLKADGTKFGKTAGGAIWLDP 243

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA-KLQGK-EINEAKKIIATEIT 307
             T+P+ F+Q+W N DD DVV + K  T L   +ID +A K+Q +    EA+K +A E+T
Sbjct: 244 NKTTPFEFYQFWANTDDRDVVKYLKYFTFLTKEQIDELAEKVQSEPHKREAQKTLAEEMT 303

Query: 308 TMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIV 357
             VHG E  E+A       F   I S          + MPT   + +  +    ++  +V
Sbjct: 304 RFVHGEEMLEQAKRITAALFSGDIKSLTADEIEQGFKEMPTFEATPETKN----IVDWLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
             G   S  +AR  +   AI +N   +S+   ++          I +  GKKN+ +  + 
Sbjct: 360 DLGIEPSKRQAREDITKGAISMNGERVSDLGHEVTADQAIGGRFIIIRKGKKNYSLVKMS 419


>gi|313122996|ref|YP_004033255.1| tyrosyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ND02]
 gi|312279559|gb|ADQ60278.1| Tyrosyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ND02]
          Length = 421

 Score =  249 bits (636), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 153/424 (36%), Positives = 218/424 (51%), Gaps = 19/424 (4%)

Query: 7   DFLSILSERGFIHQISNPREL-DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           D L  L  RG I+Q ++   L D L     +  Y G D T  SLH GHL   M+L   Q 
Sbjct: 5   DILEDLKWRGAINQETDEEGLRDYLAKHDDLALYCGTDPTGDSLHIGHLIPFMILKRFQL 64

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            G+KP+ ++GGGT  IGDPS R   R +   + I+ N E +            G  +  +
Sbjct: 65  AGYKPVIVIGGGTGSIGDPSGRSTERVLQSEETIKHNEEALTAQMVKLF----GTENFRI 120

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  WL  +  ++ LR+ G  F VN ML+ E V SRL  E  +SF EF+Y ILQA DF 
Sbjct: 121 VNNRDWLGKMTLLEFLRDYGKLFQVNNMLNKEVVASRL--ESGISFTEFSYQILQAIDFY 178

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK--LFALTSPLLTTASGTKMGKTLSG 243
            L +++  ++Q+GG+DQWGNI  GIDL  RL+      F LT PL+  A GTK GK+  G
Sbjct: 179 ILNRDHGVQMQIGGADQWGNITAGIDLIHRLEGADRPAFGLTIPLMLKADGTKFGKSAGG 238

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKI 301
           A+WL+ E TSPY F+Q+W N DD DV+ + K  T L   EID + +    E    EA+K 
Sbjct: 239 AVWLDPEKTSPYEFYQFWINQDDRDVIKYLKYFTFLNHEEIDALEEKVKTEPWKREAQKR 298

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISI------SKDEVSRGMGLLTL 355
           +A E+T  VHG E  ++A T     F  ++       + I      S +  +    L+  
Sbjct: 299 LAEEVTKFVHGEEGLKEAQTVTEALFSGNVKDLTTKQVEIALAKAPSAESGAEKKNLVDF 358

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK-LQDFDSTGNIKLSFGKKNHIIC 414
           +V     +S  +AR  + + AI +N   I +   ++     FD    I +  GKK + + 
Sbjct: 359 LVDTKIESSKRQAREDVNNGAIYVNGDRIQDTDFEVDPAAAFDGKFVI-IRKGKKKYTLV 417

Query: 415 HLCG 418
           H+ G
Sbjct: 418 HIKG 421


>gi|261337854|ref|ZP_05965738.1| tyrosine--tRNA ligase [Bifidobacterium gallicum DSM 20093]
 gi|270277323|gb|EFA23177.1| tyrosine--tRNA ligase [Bifidobacterium gallicum DSM 20093]
          Length = 440

 Score =  249 bits (636), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 143/416 (34%), Positives = 231/416 (55%), Gaps = 29/416 (6%)

Query: 5   KSDFLSILSE---RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
           ++ F S+L E   RG ++Q ++   L    +   +T Y G+D TA+SLH G+L QL+L+ 
Sbjct: 9   QAGFDSVLDELEWRGLVNQSTDRDRLAAALNGEPITYYCGFDPTAASLHIGNLVQLILMR 68

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI-QENIEKIKGIFSSFIKYGTGK 120
            LQ+ GH PI+L+GG T +IGDP  R    R + ++ I  +  E++K      +    G 
Sbjct: 69  HLQEAGHHPIALVGGATGLIGDP--RQSGERTLNAKSIVAQWAERLKRQIGGILVV-DGP 125

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
                ++N  W  ++  ID LR++G  F +  ML+ ++V  RL  E  +SF EF+Y +LQ
Sbjct: 126 NATRFVSNYDWTANMNVIDFLRDVGKNFRLGTMLAKDTVARRLDSEDGISFTEFSYQVLQ 185

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
             D++ L   YDC L+ GGSDQWGN+  G+DL  +++   +  +T+P++T A G K GK+
Sbjct: 186 GNDYLHLYDEYDCTLETGGSDQWGNLTSGLDLIHKVRGVDVNVMTTPIITDAQGKKFGKS 245

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN---- 296
              AIWL+ +M S Y F+Q+W N  DA++ S  K  T LP  EI+R+  +   E N    
Sbjct: 246 EGNAIWLDADMLSVYKFYQFWFNRPDAEMESLLKAFTFLPKDEIERL--VNESETNPGAR 303

Query: 297 EAKKIIATEITTMVHGREEAEKAATAAMECFD-----MSIHSQHMPT----ISISKDE-- 345
           EA++++A E+T++VHG E  + A  A+   F       SI  Q +      + I  ++  
Sbjct: 304 EAQRVLAWEVTSLVHGDEATKHAIEASTALFGRGGDVTSIDEQTLEAALEGVKIDMEDGT 363

Query: 346 -----VSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
                V+ G  ++   VKAG   S +EAR+ ++S  + +NN  + +E+  +  +DF
Sbjct: 364 KAFAPVAEGDRIIEAAVKAGLVKSMSEARKTIRSGGLYLNNVRVEDEEATLNGEDF 419


>gi|184154544|ref|YP_001842884.1| tyrosyl-tRNA synthase [Lactobacillus fermentum IFO 3956]
 gi|227514191|ref|ZP_03944240.1| tyrosine--tRNA ligase [Lactobacillus fermentum ATCC 14931]
 gi|254783611|sp|B2GF15|SYY_LACF3 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|183225888|dbj|BAG26404.1| tyrosyl-tRNA synthase [Lactobacillus fermentum IFO 3956]
 gi|227087454|gb|EEI22766.1| tyrosine--tRNA ligase [Lactobacillus fermentum ATCC 14931]
          Length = 417

 Score =  249 bits (636), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 150/421 (35%), Positives = 227/421 (53%), Gaps = 28/421 (6%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG ++Q ++   L  L  +  +  Y G D +  SLH GHL   M+L   Q  GHKP+
Sbjct: 7   LKWRGALNQATDEEGLRELTEEKKIALYCGTDPSGDSLHIGHLIPFMMLKRFQLAGHKPV 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKI-KGIFSSFIKYGTGKTDALMLNNET 130
            L+GGGT  IGDPS R   R +    ++++N++ + K +   F     G  +  ++NN  
Sbjct: 67  ILIGGGTGAIGDPSGRKTERDLETRSKLEQNVQSLTKQMIRLF-----GTENFTIVNNYD 121

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           WL     ID LR+ G  F++N ML+ E V SRL  +  +SF EF Y ILQA DF+ L ++
Sbjct: 122 WLSKFTMIDFLRDYGKLFNLNTMLNKEVVASRL--DAGISFTEFTYQILQAIDFLHLYRH 179

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLK--TPKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
            D +LQ+GGSDQWGNI  GIDL  +++    K+F +T PL+  A GTK GKT  GA+WL+
Sbjct: 180 NDVQLQIGGSDQWGNITSGIDLIHKVEGSDTKVFGVTIPLMLKADGTKFGKTAGGAVWLD 239

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM-AKLQGKEIN-EAKKIIATEI 306
            E TSPY F+Q+W N DD DVV + K  T L   EI  +  K+Q +    EA++ +A E+
Sbjct: 240 PEKTSPYEFYQFWLNQDDRDVVKYLKYFTFLSQEEIAGLEEKVQTEPWKREAQRRLAQEV 299

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLI 356
           TT VHG+   ++A   +   F  +I               P++ +S +  +    ++  +
Sbjct: 300 TTFVHGQAATDQAEKISAILFSGNIQDLTTAEVEQAFAGTPSVEVSAEPAN----IVDWL 355

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISN-EKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           V      S  +AR  +K+ AI++N   +++ E        FD    + +  GKKN+ +  
Sbjct: 356 VDTKIEPSKRQAREDVKNGAIRVNGEKVTDLEATLDPTAKFDGK-YVVIRRGKKNYTLAK 414

Query: 416 L 416
           +
Sbjct: 415 V 415


>gi|291515289|emb|CBK64499.1| tyrosyl-tRNA synthetase [Alistipes shahii WAL 8301]
          Length = 434

 Score =  249 bits (635), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 140/428 (32%), Positives = 225/428 (52%), Gaps = 23/428 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG IH I    +  +   Q   TAY+G D TA SLH GHL  +M+L   Q  
Sbjct: 5   NFIEELEWRGMIHTIMPGAKEQLEKEQ--TTAYLGIDPTADSLHIGHLVGVMILKHFQMC 62

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+P++L+GG T +IGDPS + + R ++  + ++ N E IK   +  + + +   +A  L
Sbjct: 63  GHRPLALVGGATGMIGDPSGKSQERNLLDEKTLRHNQEAIKRQLAKLLDFDSDAPNAAAL 122

Query: 127 -NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDF 184
            NN  W+    ++D +R+IG   +VN M++ +SV+ R   E   +SF EF Y ++Q YDF
Sbjct: 123 VNNYDWMKEFTFLDFIRDIGKCITVNYMMAKDSVKKRFNGEGDGMSFTEFTYQLVQGYDF 182

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERL--KTPKLFALTSPLLTTASGTKMGKTLS 242
           + L +  +C++Q+GG+DQWGNI  G +L  R      + F +T PL+T A GTK GKT S
Sbjct: 183 LHLYETMNCKIQLGGADQWGNITTGTELIRRKLGAEAEAFGITCPLITKADGTKFGKTES 242

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKK 300
           G +WL+   TSPY F+Q+W N+ D D   + K  T L    ID +         +   +K
Sbjct: 243 GNVWLDPRYTSPYKFYQFWLNVSDEDAKRYIKIFTLLDRETIDALIAEHDAAPHLRVLQK 302

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDEV 346
            +A EIT M+H REE EKA  A+   F  +                 + +P   +++ E+
Sbjct: 303 RLAEEITCMIHSREEYEKAVEASAILFGGATSEALRRLDEQTLLQVFEGVPQYRVARTEL 362

Query: 347 SRGMGLLTLIV-KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLS 405
           + G+  + L   K+    S  E R+ ++   + +N   +++    +   D  +   + + 
Sbjct: 363 AAGIPFVDLCAEKSDIFASKGECRKLVQGGGVSLNKEKLADAMRPVTDADLIAGKYLLVQ 422

Query: 406 FGKKNHII 413
            GKKN+ +
Sbjct: 423 RGKKNYYL 430


>gi|320531707|ref|ZP_08032646.1| tyrosyl-tRNA synthetase [Actinomyces sp. oral taxon 171 str. F0337]
 gi|320136087|gb|EFW28096.1| tyrosyl-tRNA synthetase [Actinomyces sp. oral taxon 171 str. F0337]
          Length = 420

 Score =  249 bits (635), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 143/422 (33%), Positives = 229/422 (54%), Gaps = 27/422 (6%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +D L  L  RG I Q ++   L    + G VT Y G+D TA SLH GHL  + ++  LQ 
Sbjct: 2   TDILDELQWRGLIAQHTDIDALRAALTDGAVTFYCGFDPTAPSLHHGHLVAVKVMRHLQL 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI--------QENIEKIKGIFSSFIKYG 117
            GH P++L+GG T +IGDP  R +  R + ++++        QE +E +           
Sbjct: 62  AGHHPLALVGGATGLIGDP--RAKGERTLNTKDVVAGWAAGLQEQLENLLDF-------- 111

Query: 118 TGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYM 177
           +G   A ++NN  W  ++  ID LR++G  F +  MLS + V  RL  E+ +S+ EF+Y 
Sbjct: 112 SGDNPARIVNNLDWTQAMSAIDFLRDLGKHFRMGTMLSKDIVARRLASEEGISYTEFSYQ 171

Query: 178 ILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
           +LQA D++EL + Y C L++GG+DQWGN++ G+DL  +++   +  +T+PL+T A GTK 
Sbjct: 172 VLQANDYLELYRRYGCTLEVGGNDQWGNLVGGMDLIHKVEGDSVHVMTNPLITKADGTKF 231

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT--TLPMSEIDRMAKLQGKEI 295
           GK+  GAIWLN EM SPY F+Q+W  +DDADVV F K  T       E    A  +  + 
Sbjct: 232 GKSEGGAIWLNPEMLSPYAFYQFWLQVDDADVVRFLKVFTFLEREEIERLEAATAENPKA 291

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECF------DMSIHSQHMPTISISKDEVS-R 348
            EA++++A E+ T VHG +   +A  A    +      D+   +    T  ++  +V+  
Sbjct: 292 REAQRVLAHEVCTWVHGADATAQAEAATSALWGRGDLTDIDEATILTATSDLASSDVTVG 351

Query: 349 GMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGK 408
           G  ++ L+V  G     N AR+ +      +NN  +++E + I  +   + G + +  G+
Sbjct: 352 GTTIVDLLVGTGLERGRNAARKTIAGGGAYLNNVKVADETVVIGPEHLLAGGVVLVRKGR 411

Query: 409 KN 410
           +N
Sbjct: 412 RN 413


>gi|294674941|ref|YP_003575557.1| tyrosine--tRNA ligase [Prevotella ruminicola 23]
 gi|294473475|gb|ADE82864.1| tyrosine--tRNA ligase [Prevotella ruminicola 23]
          Length = 431

 Score =  249 bits (635), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 148/429 (34%), Positives = 231/429 (53%), Gaps = 26/429 (6%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG + Q+    E   L  + +VTAY+G D TA SLH GHL  +M+L  LQ  
Sbjct: 3   NFVEELKWRGMLAQMMPGTEE--LLQKEMVTAYLGTDPTADSLHIGHLCGIMMLRHLQHC 60

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD-ALM 125
           GH+P+ L+GG T +IGDPS + + R ++ ++ +  N E IK   + F+ + + + + ALM
Sbjct: 61  GHRPVILVGGATGMIGDPSGKSQERNLLNNETLYHNQECIKKQVAKFLDFESKEPNAALM 120

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK--REQSLSFLEFNYMILQAYD 183
           +NN  W+    ++D  RE+G   +VN M++ ESV+ RL       LSF EF Y +LQ YD
Sbjct: 121 VNNYDWMKDFTFLDFAREVGKHITVNYMMAKESVQQRLNGTARDGLSFTEFTYQLLQGYD 180

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERL--KTPKLFALTSPLLTTASGTKMGKTL 241
           F+ L ++Y  +LQ+GG+DQWGN+  G +L  R      + FALT PL+T + G K GKT 
Sbjct: 181 FLYLYQHYGVKLQLGGNDQWGNMTTGTELIRRTLGNEVETFALTCPLITKSDGKKFGKTE 240

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEA--K 299
           SG IWL+   T+PY F+Q+W N+ D D   + K  T+L    ID + +   ++      +
Sbjct: 241 SGNIWLDPVRTTPYKFYQFWLNVSDDDAERYIKIFTSLEKDVIDALIEEHKQDPGRRVLQ 300

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDE 345
           K +A E+T +VH +E  + A  A+   F  S                   +P   ISKD+
Sbjct: 301 KRLAEEVTVLVHSKEALDTAIEASNILFGKSTKEGLEKLDEQTLLDVFDGVPQFEISKDQ 360

Query: 346 VSR-GMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           + +  + LLT +  A    S  E R+ ++   + +N   I+++   I  +D      +  
Sbjct: 361 LGQPAIELLTTV--APVFPSKGEMRKMVQGGGVSLNKEKITDQNRAITAEDLIDGKYLLA 418

Query: 405 SFGKKNHII 413
             GKKN+ +
Sbjct: 419 QKGKKNYYL 427


>gi|25028096|ref|NP_738150.1| tyrosyl-tRNA synthetase [Corynebacterium efficiens YS-314]
 gi|259505648|ref|ZP_05748550.1| tyrosine--tRNA ligase [Corynebacterium efficiens YS-314]
 gi|81750575|sp|Q8FTM1|SYY_COREF RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|23493380|dbj|BAC18350.1| putative tyrosyl-tRNA synthetase [Corynebacterium efficiens YS-314]
 gi|259166779|gb|EEW51333.1| tyrosine--tRNA ligase [Corynebacterium efficiens YS-314]
          Length = 421

 Score =  249 bits (635), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 150/419 (35%), Positives = 234/419 (55%), Gaps = 21/419 (5%)

Query: 6   SDFLSILSERGFIHQISNPRELDIL--CSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           ++ +  LS RG I+Q +   +LD L   +Q  +T Y G+D T  SLHAGHL  L++L   
Sbjct: 3   TNIIDELSWRGLINQST---DLDALREATQEPITLYCGFDPTGPSLHAGHLVPLLMLRRF 59

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQE-IQENIEKIKGIFSSFIKYGTGKTD 122
           Q+ GH PI L GG T +IGDP  RD   R M S + + E  E+I    S F+ +  G+  
Sbjct: 60  QQAGHNPIVLAGGATGMIGDP--RDVGERTMNSADTVAEWAERISDQLSRFVDF-EGEHA 116

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
           A ++NN  W  ++  +  LR++G  F +N ML+ ++V+ RL+ +  +S+ EF+YM+LQA 
Sbjct: 117 ARLVNNAEWTNNMSVVTFLRDVGKHFPLNTMLARDTVKRRLETD-GISYTEFSYMLLQAN 175

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK-TL 241
           DFVEL + ++C LQ+GG DQWGNI+ G+DL  R++   +  +T PL+T + G K GK T 
Sbjct: 176 DFVELNRRFNCILQVGGGDQWGNIVSGVDLNRRVQGKSVHGITVPLVTDSEGKKFGKSTG 235

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAK 299
            G++WL+ EMTSPY+++QY+ N  DADV+ + +  T L   E+D +     +     EA+
Sbjct: 236 GGSLWLDPEMTSPYSWYQYFINAADADVIRYLRWFTFLTKEELDELEVEVAERPFKREAQ 295

Query: 300 KIIATEITTMVHGREEAEKAATAAMECF---DMSIHSQHMPTISISKDEVS-----RGMG 351
           + +A E+T +VHG E       AA   F   ++    +     S+S+ EV+         
Sbjct: 296 RRLAREMTNLVHGEEATAAVELAAQALFGRAELRDLDEKTLEASVSETEVAEIQPGEPRT 355

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
           ++ L++ +G   S   ARR +      +NN  I+ +  +    D      + L  GKKN
Sbjct: 356 IVDLLIASGLVDSRGAARRTISEGGAYVNNERITADDWEPSESDLLHGQWLVLRKGKKN 414


>gi|256383894|gb|ACU78464.1| tyrosine--tRNA ligase [Mycoplasma mycoides subsp. capri str. GM12]
 gi|256384725|gb|ACU79294.1| tyrosine--tRNA ligase [Mycoplasma mycoides subsp. capri str. GM12]
 gi|296455264|gb|ADH21499.1| tyrosine--tRNA ligase [synthetic Mycoplasma mycoides JCVI-syn1.0]
          Length = 414

 Score =  249 bits (635), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 156/419 (37%), Positives = 227/419 (54%), Gaps = 20/419 (4%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTA-YIGYDLTASSLHAGHLTQLMLLFWL 63
           K++ L  L  RG I QI+N  E  IL +Q    A Y G+D TA SLH GHL  ++ L   
Sbjct: 2   KNNILEELKWRGLIKQITN--ESKILDAQNNSDAVYCGFDPTADSLHVGHLMMIITLKRF 59

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
                KPI+L+GG T +IGDPSF+   R +    +++ NI KI       I       + 
Sbjct: 60  ADYNFKPIALIGGATGMIGDPSFKANERVLQTKDQVEHNINKISAQLKQII------PNV 113

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
             +NN TWL SI  ID LR+IG  F+++ +L+ ES+ +R+  +  LS  EF Y +LQAYD
Sbjct: 114 NFVNNNTWLSSISLIDFLRDIGKHFNLSYLLAKESIATRI--QTGLSVTEFCYTMLQAYD 171

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERL--KTPKLFALTSPLLTTASGTKMGKTL 241
           F  L KN +C +Q+GGSDQWGNI  GID       K  K   LT  LLT + G K GKT 
Sbjct: 172 FYYLYKNNNCSIQIGGSDQWGNITSGIDFISDTINKNNKAAGLTINLLTKSDGQKFGKTE 231

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AK 299
           SGA+WL+K  TS Y F+Q+W N  D D ++  K LT L   +ID + K    + ++   +
Sbjct: 232 SGAVWLDKTKTSEYEFYQFWFNQTDQDSINLLKCLTFLTKEQIDNLIKEHQNQPSKHLLQ 291

Query: 300 KIIATEITTMVHGREEAEKA-----ATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLT 354
           K +A+E+T  VH ++  +KA     A  + + F ++     M   S+   ++++   ++ 
Sbjct: 292 KALASEMTKFVHQQQGLDKALKLTEAFFSGDLFSLTDDLFKMALNSLPNTQINKDTKVID 351

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            +++   A+S  EAR  L + AI INN II +E   I   D      + +  GKK + +
Sbjct: 352 ALIEVKAASSKREAREFLTNKAIMINNQIIEDENTLISSFDLIQNKYLLVKKGKKKYFV 410


>gi|29833001|ref|NP_827635.1| tyrosyl-tRNA synthetase [Streptomyces avermitilis MA-4680]
 gi|81716787|sp|Q829F2|SYY_STRAW RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|29610122|dbj|BAC74170.1| putative tyrosyl-tRNA synthetase [Streptomyces avermitilis MA-4680]
          Length = 422

 Score =  249 bits (635), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 146/424 (34%), Positives = 230/424 (54%), Gaps = 15/424 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +D +  L  RG +   ++   L    + G VT Y G+D TA SLH G+L Q++ +  +Q+
Sbjct: 2   TDIVDELKWRGLVALSTDEDALRKAFADGPVTFYCGFDPTAPSLHLGNLVQILTMRRIQQ 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI-QENIEKIKGIFSSFIKYGTGKTDAL 124
            G++P+ L+GG T +IGDP  +  S R + S+E+  E +E+++   +  + +  G   A+
Sbjct: 62  AGNRPLGLVGGATGLIGDP--KPNSERTLNSREVVAEWVERLRAQIAPLLDF-EGPNAAI 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M+NN  W   +  I+ LR++G +F VN+M++ E+V  RL  +  +S+ EF+Y ILQ  DF
Sbjct: 119 MVNNLDWTQGLSAIEFLRDVGKYFRVNKMIAKEAVSRRLNSDAGISYTEFSYQILQGMDF 178

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLF-ALTSPLLTTASGTKMGKTLSG 243
           +EL + Y C LQ GGSDQWGN+  G DL  R +   +  AL +PL+T A GTK GKT SG
Sbjct: 179 LELYRRYGCTLQTGGSDQWGNLTSGTDLIHRAEPDAVVHALGTPLITKADGTKFGKTESG 238

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE---INEAKK 300
            IWL+ EMT+PY F+Q+W N DD DV  F +  +     EI+ + K Q +E      A++
Sbjct: 239 TIWLDPEMTTPYAFYQFWLNADDRDVSKFLRIFSFKSHEEIEELEK-QTEERPQARAAQR 297

Query: 301 IIATEITTMVHGREE------AEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLT 354
            +A E+TT+VHG ++      A KA     E  ++   +       +   +V+    ++ 
Sbjct: 298 ALAEELTTLVHGADQTAAVIAASKALFGQGELTELDEATLAAALSELPHVKVAEPAPVVD 357

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           L  +     S + ARR +K     +NN  ++ E      +D      + L  GKKN    
Sbjct: 358 LFAEVALVASKSAARRTIKEGGAYVNNVKVAAEDAVPAKEDLLHGRWLVLRRGKKNLAAV 417

Query: 415 HLCG 418
            + G
Sbjct: 418 EVTG 421


>gi|260662606|ref|ZP_05863501.1| tyrosyl-tRNA synthetase [Lactobacillus fermentum 28-3-CHN]
 gi|260553297|gb|EEX26240.1| tyrosyl-tRNA synthetase [Lactobacillus fermentum 28-3-CHN]
          Length = 417

 Score =  248 bits (634), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 150/421 (35%), Positives = 226/421 (53%), Gaps = 28/421 (6%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG ++Q ++   L  L  +  +  Y G D +  SLH GHL   M+L   Q  GHKP+
Sbjct: 7   LKWRGALNQATDEEGLRELTEEKKIALYCGTDPSGDSLHIGHLIPFMMLKRFQLAGHKPV 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKI-KGIFSSFIKYGTGKTDALMLNNET 130
            L+GGGT  IGDPS R   R +    ++++N++ + K +   F     G  +  ++NN  
Sbjct: 67  ILIGGGTGAIGDPSGRKTERDLETRSKLEQNVQSLTKQMIRLF-----GTENFTIVNNYD 121

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           WL     ID LR+ G  F++N ML+ E V SRL  +  +SF EF Y ILQA DF+ L ++
Sbjct: 122 WLSKFTMIDFLRDYGKLFNLNTMLNKEVVASRL--DAGISFTEFTYQILQAIDFLHLYRH 179

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLK--TPKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
            D +LQ+GGSDQWGNI  GIDL  +++    K+F +T PL+  A GTK GKT  GA+WL+
Sbjct: 180 NDVQLQIGGSDQWGNITSGIDLIHKVEGSDTKVFGVTIPLMLKADGTKFGKTAGGAVWLD 239

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM-AKLQGKEIN-EAKKIIATEI 306
            E TSPY F+Q+W N DD DVV + K  T L   EI  +  K+Q +    EA++ +A E+
Sbjct: 240 PEKTSPYEFYQFWLNQDDRDVVKYLKYFTFLSQEEIAGLEEKVQTEPWKREAQRRLAQEV 299

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLI 356
           TT VHG+   ++A   +   F   I               P++ +S +  +    ++  +
Sbjct: 300 TTFVHGQAATDQAEKISAILFSGDIQDLTTAEVEQAFAGTPSVEVSAEPAN----IVDWL 355

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISN-EKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           V      S  +AR  +K+ AI++N   +++ E        FD    + +  GKKN+ +  
Sbjct: 356 VDTKIEPSKRQAREDVKNGAIRVNGEKVTDLEATLDPTAKFDGK-YVVIRRGKKNYTLAK 414

Query: 416 L 416
           +
Sbjct: 415 V 415


>gi|104773441|ref|YP_618421.1| tyrosyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC 11842]
 gi|123077353|sp|Q1GBW9|SYY_LACDA RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|103422522|emb|CAI97096.1| Tyrosyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC 11842]
          Length = 421

 Score =  248 bits (634), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 153/424 (36%), Positives = 218/424 (51%), Gaps = 19/424 (4%)

Query: 7   DFLSILSERGFIHQISNPREL-DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           D L  L  RG I+Q ++   L D L     +  Y G D T  SLH GHL   M+L   Q 
Sbjct: 5   DILEDLKWRGAINQETDEEGLRDYLAKHDDLALYCGTDPTGDSLHIGHLIPFMILKRFQL 64

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            G+KP+ ++GGGT  IGDPS R   R +   + I+ N E +            G  +  +
Sbjct: 65  AGYKPVIVIGGGTGSIGDPSGRSTERVLQSEETIKHNEEALTAQMVKLF----GTENFRI 120

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  WL  +  ++ LR+ G  F VN ML+ E V SRLK    +SF EF+Y ILQA DF 
Sbjct: 121 VNNRDWLGKMNLLEFLRDYGKLFQVNNMLNKEVVASRLK--NGISFTEFSYQILQAIDFY 178

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK--LFALTSPLLTTASGTKMGKTLSG 243
            L +++  ++Q+GG+DQWGNI  GIDL  RL+      F LT PL+  A GTK GK+  G
Sbjct: 179 ILNRDHCVQMQIGGADQWGNITAGIDLIHRLEGADRPAFGLTIPLMLKADGTKFGKSAGG 238

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKI 301
           A+WL+ E TSPY F+Q+W N DD DV+ + K  T L   EID + +    E    EA+K 
Sbjct: 239 AVWLDPEKTSPYEFYQFWINQDDRDVIKYLKYFTFLKHEEIDALEEKVKTEPWKREAQKR 298

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISI------SKDEVSRGMGLLTL 355
           +A E+T  VHG E  ++A T     F  ++       + I      S +  +    L+  
Sbjct: 299 LAEEVTKFVHGEEGLKEAQTVTEALFSGNVKDLTTKQVEIALAKAPSAESGAEKKNLVDF 358

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK-LQDFDSTGNIKLSFGKKNHIIC 414
           +V     +S  +AR  + + AI +N   I +   ++     FD    I +  GKK + + 
Sbjct: 359 LVDTKIESSKRQAREDVNNGAIYVNGDRIQDTDFEVDPAAAFDGKFVI-IRKGKKKYTLV 417

Query: 415 HLCG 418
           H+ G
Sbjct: 418 HIKG 421


>gi|291301906|ref|YP_003513184.1| tyrosyl-tRNA synthetase [Stackebrandtia nassauensis DSM 44728]
 gi|290571126|gb|ADD44091.1| tyrosyl-tRNA synthetase [Stackebrandtia nassauensis DSM 44728]
          Length = 416

 Score =  248 bits (634), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 143/399 (35%), Positives = 219/399 (54%), Gaps = 24/399 (6%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I   ++   L      G V  Y+G+D TA+SLH GH TQ++    LQ  GH+P+
Sbjct: 7   LQWRGLIQDATDSDALRAHFEAGPVRFYVGFDPTAASLHVGHFTQVLTARRLQLAGHRPL 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQEN-IEKIKGIFSSFIKYGTGKTDALMLNNET 130
            L+GG T  IGDP  ++   R+M S E+    +++I+     F+ Y  G   A+++NN  
Sbjct: 67  LLVGGATGQIGDP--KESGERVMNSPEVVAGYLDRIREQMRPFVTY-DGDNAAVLVNNLD 123

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           W   +  ID LR++G  F VN+ML+ + V++RL  E  +SF EF Y ++QA D+  L + 
Sbjct: 124 WTGRMNAIDFLRDVGKHFPVNKMLARDVVKARL--ESGISFTEFAYQLIQANDYYNLHQE 181

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKE 250
           Y C +Q GGSDQWGNI  G+D   R  +  + A  +PL+T A GTK GKT  GA+WL+ E
Sbjct: 182 YGCSVQFGGSDQWGNITAGVDFIRRKGSGPVHAFVTPLVTKADGTKFGKTEGGAVWLDPE 241

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE--INEAKKIIATEITT 308
           +T+PY F+Q+W N+DD D+ ++ +R +     EI  + K   ++     A++ +A E+TT
Sbjct: 242 LTTPYAFYQFWVNVDDRDIGTYLRRFSFKSHDEILELDKATAEKPAARAAQRALAEELTT 301

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMP-TISISKDEVSRGMGLLT---------LIVK 358
           ++HG  E  +   A+   F     S+  P T+  +  E     GL+T         L  +
Sbjct: 302 LLHGETECAQVIAASKALFGRGELSELAPSTLESALSEA----GLVTATDDSPITALFKE 357

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
            G   ST+EARR +      +NN  I++  +  KL D +
Sbjct: 358 TGLTASTSEARRAIADGGAYVNNVRITD--VDAKLADVE 394


>gi|299782728|gb|ADJ40726.1| Tyrosyl-tRNA synthetase (Tyrosine--tRNA ligase) (TyrRS)
           [Lactobacillus fermentum CECT 5716]
          Length = 417

 Score =  248 bits (634), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 149/418 (35%), Positives = 226/418 (54%), Gaps = 28/418 (6%)

Query: 15  RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLM 74
           RG ++Q ++   L  L  +  +  Y G D +  SLH GHL   M+L   Q  GHKP+ L+
Sbjct: 10  RGALNQATDEEGLRELTEEKKIALYCGTDPSGDSLHIGHLIPFMMLKRFQLAGHKPVILI 69

Query: 75  GGGTSIIGDPSFRDESRRMMRSQEIQENIEKI-KGIFSSFIKYGTGKTDALMLNNETWLC 133
           GGGT  IGDPS R   R +    ++++N++ + K +   F     G  +  ++NN  WL 
Sbjct: 70  GGGTGAIGDPSGRKTERDLETMSKLEQNVQSLTKQMIRLF-----GTENFTIVNNYDWLS 124

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDC 193
               ID LR+ G  F++N ML+ E V SRL  +  +SF EF Y ILQA DF+ L ++ D 
Sbjct: 125 KFTMIDFLRDYGKLFNLNTMLNKEVVASRL--DAGISFTEFTYQILQAIDFLHLYRHNDV 182

Query: 194 RLQMGGSDQWGNIICGIDLGERLK--TPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
           +LQ+GGSDQWGNI  GIDL  +++    K+F +T PL+  A GTK GKT  GA+WL+ E 
Sbjct: 183 QLQIGGSDQWGNITSGIDLIHKVEGSDTKVFGVTIPLMLKADGTKFGKTAGGAVWLDPEK 242

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM-AKLQGKEIN-EAKKIIATEITTM 309
           TSPY F+Q+W N DD DVV + K  T L   EI  +  K+Q +    EA++ +A E+TT 
Sbjct: 243 TSPYEFYQFWLNQDDRDVVKYLKYFTFLSQEEIAGLEEKVQTEPWKREAQRRLAQEVTTF 302

Query: 310 VHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIVKA 359
           VHG+   ++A   +   F  +I               P++ +S +  +    ++  +V  
Sbjct: 303 VHGQAATDQAEKISAILFSGNIQDLTTAEVEQAFAGTPSVEVSAEPAN----IVDWLVDT 358

Query: 360 GFATSTNEARRHLKSNAIKINNSIISN-EKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
               S  +AR  +K+ AI++N   +++ E        FD    + +  GKKN+ +  +
Sbjct: 359 KIEPSKRQAREDVKNGAIRVNGEKVTDLEATLDPTAKFDGK-YVVIRRGKKNYTLAKV 415


>gi|83319274|ref|YP_424607.1| tyrosyl-tRNA synthetase [Mycoplasma capricolum subsp. capricolum
           ATCC 27343]
 gi|97201592|sp|Q2SRK6|SYY_MYCCT RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|83283160|gb|ABC01092.1| tyrosyl-tRNA synthetase [Mycoplasma capricolum subsp. capricolum
           ATCC 27343]
          Length = 414

 Score =  248 bits (634), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 154/419 (36%), Positives = 229/419 (54%), Gaps = 20/419 (4%)

Query: 5   KSDFLSILSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           K++ L  L  RG I Q++N ++ LD   S   V  Y G+D TA SLH GHL  ++ L   
Sbjct: 2   KNNILEELKWRGLIKQVTNEQKILDAQNSNDAV--YCGFDPTADSLHVGHLMMIITLKRF 59

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
              G KPI+L+GG T +IGDPSF+   R +   Q++  NI KI       I   +     
Sbjct: 60  ALQGFKPIALIGGATGMIGDPSFKASERVLQTKQQVDHNINKISTQLKEIIPTVS----- 114

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
             +NN  WL  I  ID LR+IG  F+++ +L+ ES+ +R+  +  LS  EF Y +LQA+D
Sbjct: 115 -FVNNRDWLEDISLIDFLRDIGKHFNLSYLLAKESIATRI--QTGLSVTEFCYTMLQAFD 171

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERL--KTPKLFALTSPLLTTASGTKMGKTL 241
           F  L KN DC +Q+GGSDQWGNI  GID       K  K   +T  LLT + G K GKT 
Sbjct: 172 FYYLYKNNDCSVQIGGSDQWGNITSGIDFISDTINKNNKASGVTINLLTKSDGQKFGKTE 231

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AK 299
           SGA+WL+K  TS Y F+Q+W N  D D ++  K LT L   +I+++ K   ++  +   +
Sbjct: 232 SGAVWLDKTKTSEYEFYQFWFNQTDEDSINLLKCLTFLTKDQIEQLIKQHNQQPAKHFLQ 291

Query: 300 KIIATEITTMVHGREEAEKA-----ATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLT 354
           K +A+E+T  VH ++  +KA     A  + + F ++     M   S+   ++++   ++ 
Sbjct: 292 KALASEMTKFVHQQQGLDKALKLTEAFFSGDLFSLTDDLFKMALNSLPNTQINKDTKVID 351

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            +V+   A+S  EAR  LK+ AI INN +I +E L I   D      + +  GKK + +
Sbjct: 352 ALVELKVASSKREAREFLKNKAILINNQVIEDENLVISSFDLIQNKYLLVKKGKKKYFV 410


>gi|295395455|ref|ZP_06805654.1| tyrosine--tRNA ligase [Brevibacterium mcbrellneri ATCC 49030]
 gi|294971777|gb|EFG47653.1| tyrosine--tRNA ligase [Brevibacterium mcbrellneri ATCC 49030]
          Length = 430

 Score =  248 bits (633), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 147/432 (34%), Positives = 227/432 (52%), Gaps = 26/432 (6%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D  S L +R  + Q ++   L    S+  +  Y+G+D TA SLH G+L Q+++   LQ  
Sbjct: 2   DIFSDLVKRELVAQTTDEDALHKALSEESLKFYVGFDPTAPSLHMGNLVQILVARRLQAA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN-IEKIKGIFSSFIKYGTGKTDALM 125
           GH P  L+GG T +IGDP  R  S R +  +++ E  +EKI+     F+ +  G   A M
Sbjct: 62  GHTPYMLVGGATGLIGDP--RMTSERSLNPRDVVEGWVEKIRAQIQPFLDF-EGPNAATM 118

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  W   I  +D LR++G  FSVNRML+ E+V +RL  +  +SF EF Y +LQ  D++
Sbjct: 119 VNNYDWTGDISVLDFLRDVGKHFSVNRMLAKEAVSARLNSDAGISFTEFAYQLLQGNDYL 178

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           EL + Y   LQ GGSDQWGN+  G DL  R++   + A++  L+T A GTK GKT +G +
Sbjct: 179 ELYRRYGITLQTGGSDQWGNLTSGADLIRRVERTSVHAMSIKLITKADGTKFGKTETGTV 238

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAK---KII 302
           WL+  +TSPY F Q+W N  DAD   + K  +   + EI+ + + Q KE    +   K +
Sbjct: 239 WLDPTLTSPYAFSQFWLNTADADAPGYLKVFSLRELDEINDIIE-QFKEAPHTRLVQKTL 297

Query: 303 ATEITTMVHGREEAEKAATAAMECFD-----------MSIHSQHMPTISISKDEVSRGMG 351
           A ++T +VHG+E  ++A  AA   F            ++  +  +P   I    ++ G+ 
Sbjct: 298 ARDVTELVHGKEATDQAFAAADALFGRGELTELDEPTIAGATSALPGTDIDSAALAAGVN 357

Query: 352 LLTLIVKA----GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF- 406
           ++ L V A    G   S  E R+ ++     INN  + +E   +    F   G+  ++  
Sbjct: 358 VVDLFVDAFAQTGQLKSKGEVRKAIQQGGAYINNVKVESEDHVMTADQFLPAGDHAVALL 417

Query: 407 --GKKNHIICHL 416
             GKK   +  L
Sbjct: 418 RRGKKTLAVACL 429


>gi|148273171|ref|YP_001222732.1| hypothetical protein CMM_1990 [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
 gi|147831101|emb|CAN02046.1| tyrS [Clavibacter michiganensis subsp. michiganensis NCPPB 382]
          Length = 434

 Score =  248 bits (632), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 140/389 (35%), Positives = 217/389 (55%), Gaps = 13/389 (3%)

Query: 2   PAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
           P+F+ D    +  RG++H  ++   L  L S   +T Y G+D TA SLH G+L QL+L+ 
Sbjct: 16  PSFE-DVWEEIVWRGYVHVSTDQDALKELLSGPPITYYCGFDPTAPSLHLGNLVQLLLMR 74

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN-IEKIKGIFSSFIKYGTGK 120
            LQ  GH+P+ L+GG T +IGDP  R  + R +   E+  + + +++   S+F+    G 
Sbjct: 75  RLQLAGHRPLGLVGGSTGLIGDP--RPTAERTLNDPEVVADWVGRVQAQVSAFLSP-EGD 131

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               ++NN  W   +  ID LRE+G  F V  ML  ++V +RL  ++ +S+ EF+Y ILQ
Sbjct: 132 NAVRIVNNLDWTAPMSAIDFLREVGKHFRVGTMLKKDAVSARLNSDEGISYTEFSYQILQ 191

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
             DF EL + Y C LQ GGSDQWGN+  G DL  R +     A+ +PL+T + GTK GK+
Sbjct: 192 GLDFRELHRTYGCVLQTGGSDQWGNLTSGTDLIRRSERTTAHAIGTPLITNSDGTKFGKS 251

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEA 298
              AIWL+ E+TSPY F+Q+W N +D DV+   +  T L  + I+ +A+    E    EA
Sbjct: 252 EGNAIWLDAELTSPYAFYQFWLNTEDGDVIQRLRLFTFLDRARIEELARAVESEPFRREA 311

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMS-IHSQHMPTISISKDE-----VSRGMGL 352
           ++ +A E+T++VHG E  E A   A   F    + +   PT+  +  E     +  G  +
Sbjct: 312 QRTLAWEVTSLVHGIEATESAIAGAQALFGQGELTALDEPTLRAAMGELPSAQIPAGTTV 371

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINN 381
           +  ++  G  +S+ EARR +    + +NN
Sbjct: 372 IQALIDTGLVSSSGEARRAITQGGVYVNN 400


>gi|152967097|ref|YP_001362881.1| tyrosyl-tRNA synthetase [Kineococcus radiotolerans SRS30216]
 gi|189083655|sp|A6WCS8|SYY_KINRD RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|151361614|gb|ABS04617.1| tyrosyl-tRNA synthetase [Kineococcus radiotolerans SRS30216]
          Length = 422

 Score =  247 bits (631), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 149/415 (35%), Positives = 225/415 (54%), Gaps = 26/415 (6%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +D    L  RG +   ++   L      G +T Y+G+D TA+SLH GHL Q++    LQ+
Sbjct: 2   NDVWDELQWRGLVAHSTDEAALQEALQTGPLTYYVGFDPTAASLHVGHLVQVLTAKRLQQ 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN-IEKIKGIFSSFIKYGTGKTDAL 124
            GH+P+ L+GG T ++GDP  R  + R M    +    +  ++G  + F+ +  G   A 
Sbjct: 62  AGHRPLILVGGATGLVGDP--RPSAERTMNDPSVVAGWVTGLQGQIAPFLDF-DGPAAAT 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M+NN  W  S+  I+ LR++G  FSVNRML  E+V  RL     +SF EF+Y++LQ+ D+
Sbjct: 119 MVNNLDWTQSMSTIEFLRDVGKHFSVNRMLDREAVSKRLA-TTGISFTEFSYVLLQSNDY 177

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           ++L + + C LQ+GGSDQWGNI  G +L  R+    + AL +PLLT A GTK GKT SGA
Sbjct: 178 LQLHRRHGCTLQLGGSDQWGNITAGCELVRRVDQRTVHALATPLLTKADGTKFGKTESGA 237

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKII 302
           +WL+ E+TSPY F Q+W N +DA VV + K  +  P  EI+ + +  ++      A++ +
Sbjct: 238 VWLDPELTSPYAFHQFWLNAEDAKVVDYLKAFSFRPREEIEELGRQAVENPRARAAQRAL 297

Query: 303 ATEITTMVHGREEAEKAATAA--------MECFDMSIHSQHMPTISISKDEVSRGMGLLT 354
           A E+T +VHG E A     AA        +E  D  I    +  +  +     R + L  
Sbjct: 298 AHEVTALVHGEEAAVAVEAAAAALFGGSDLEAIDERILRGALAELPTAA-PADRDVRLAQ 356

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDST-GNIKLSFGK 408
           L    G A S + ARR +      +NN         IKL D ++T  +++L  G+
Sbjct: 357 LFADTGLAPSLSGARRTIGEGGAYVNN---------IKLTDPEATLRDVQLLHGR 402


>gi|302550487|ref|ZP_07302829.1| tyrosyl-tRNA synthetase [Streptomyces viridochromogenes DSM 40736]
 gi|302468105|gb|EFL31198.1| tyrosyl-tRNA synthetase [Streptomyces viridochromogenes DSM 40736]
          Length = 422

 Score =  247 bits (630), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 143/423 (33%), Positives = 229/423 (54%), Gaps = 13/423 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +D +  L  RG     ++   L    + G VT Y G+D TA SLH GHL Q++ +  LQ+
Sbjct: 2   TDIVDELKWRGLFALSTDEDALRKALADGPVTFYCGFDPTAPSLHVGHLVQVLTVRRLQQ 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQE-IQENIEKIKGIFSSFIKYGTGKTDAL 124
            GH+P++L+GG T +IGDP  R  + R +   E +   + K++     F+ +  G+  A+
Sbjct: 62  AGHRPLALVGGATGLIGDP--RPTAERTLNDPETVTGWVAKLRAQIEPFLTF-EGENAAV 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M+NN  W  ++  I+ LR+IG  F VN+ML+ +SV  RL+  + +S+ EF+Y +LQ  DF
Sbjct: 119 MVNNLDWTENLSAIEFLRDIGKHFRVNKMLTKDSVARRLESSEGISYTEFSYQLLQGMDF 178

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT-PKLFALTSPLLTTASGTKMGKTLSG 243
           ++L + Y C LQ GGSDQWGN+  G+DL  RL+    + A+ +PL+T A GTK GKT  G
Sbjct: 179 LQLYRRYGCTLQQGGSDQWGNLTAGLDLIHRLEPDATVHAMATPLMTKADGTKFGKTEGG 238

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT--TLPMSEIDRMAKLQGKEINEAKKI 301
           A+WL+ EMT+PY F+Q+W N+DD D+  + + L+  +    E       +  +   A++ 
Sbjct: 239 AVWLDPEMTTPYAFYQFWLNVDDRDISKYMRILSFRSREELEELERQTEERPQARAAQRA 298

Query: 302 IATEITTMVHGREE------AEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTL 355
           +A E+TT+VHG ++      A KA     E  ++   +       +   +V+    ++ L
Sbjct: 299 LAEELTTLVHGADQTAAVIAASKALFGQGELAELDEKTLAAALSEVPHIQVAELGPVVDL 358

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
             + G   S + ARR +K     +NN  ++ E      +D      + L  GKKN     
Sbjct: 359 FAEVGLVASKSAARRTVKEGGAYVNNVKVAGEDAVPAEEDLLHGRWLVLRRGKKNLAAAE 418

Query: 416 LCG 418
           + G
Sbjct: 419 VTG 421


>gi|319428541|gb|ADV56615.1| tyrosyl-tRNA synthetase [Shewanella putrefaciens 200]
          Length = 417

 Score =  247 bits (630), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 144/404 (35%), Positives = 215/404 (53%), Gaps = 30/404 (7%)

Query: 12  LSERGFIHQISNPRELD-ILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           L  RG I Q ++   +  +LC+  VV  Y G+D TA SLH GHL  L+LL   Q  GH+ 
Sbjct: 9   LECRGLIAQATDINAIKALLCTPQVV--YCGFDPTAGSLHIGHLVPLILLKRFQDAGHRI 66

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           I L+GG T +IGDPSF+   R +  +  +   + ++       +     +    ++NN  
Sbjct: 67  IVLLGGATGLIGDPSFKAIERSLNSTTTVSNWVNELATQILDLM-LPKLREPLTLVNNAD 125

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDFVELAK 189
           WL  +  I   R++G  FS+N ML+ ESVR RL+R +Q +SF EF+Y +LQ+YDF EL +
Sbjct: 126 WLNEVNVITFFRDVGKHFSINNMLNRESVRQRLQRPDQGISFTEFSYSLLQSYDFAELNR 185

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
            + C LQ+GG+DQWGNI+ GID   R     +F LT P++T + GTK GK+ +G +WL+ 
Sbjct: 186 RFGCCLQVGGNDQWGNILGGIDFTRRRNGSDVFGLTLPIITKSDGTKFGKSETGTVWLDA 245

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN-----EAKKIIAT 304
             TSPY F+Q+W N  DADV  F    T +   EI   A+LQ  + +     +A+ ++A 
Sbjct: 246 GKTSPYAFYQFWLNTPDADVYRFLHYYTFISCDEI---ARLQAHDKSSQSKPQAQHVLAE 302

Query: 305 EITTMVHGREEAEKAATAAMECFD-----------MSIHSQHMPTISISKDEVSRGMGLL 353
           E+T  VHG      A   +   F            M +    +PT  I+      G+ L+
Sbjct: 303 ELTRFVHGEAGLASAQRISKALFHGEVNELQLNEIMQLQLDGLPTKQIA------GLNLV 356

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
             +V++G A S   AR  +   AI +N    S  + Q+ L  ++
Sbjct: 357 DAVVQSGLAISKRAARELIAEGAISVNGKRASTAQCQLGLPLYE 400


>gi|328956502|ref|YP_004373888.1| tyrosine--tRNA ligase [Carnobacterium sp. 17-4]
 gi|328672826|gb|AEB28872.1| tyrosine--tRNA ligase [Carnobacterium sp. 17-4]
          Length = 421

 Score =  247 bits (630), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 150/421 (35%), Positives = 222/421 (52%), Gaps = 21/421 (4%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R  I+Q ++   L  L  Q  +  Y G D T  S+H GHL   M+L   Q  GH+P+
Sbjct: 7   LEWRDAINQQTDEAGLKKLIDQKKIGLYCGVDPTGDSMHIGHLIPFMILKRFQLAGHRPV 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            ++GG T  IGDPS + E R +  S+++Q N +K+     +    G  +    M+NN  W
Sbjct: 67  IVIGGATGSIGDPSGKSEERVLQTSEQVQNNSDKLSRQMENLFDAGKKEESIRMVNNLDW 126

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
              I  +D LR IG  F+VN MLS + V SRL  E  +SF EF Y ILQ+ DF+ L ++ 
Sbjct: 127 TKEISLLDFLRNIGKSFNVNTMLSKDIVASRL--ETGISFTEFTYQILQSIDFLHLYRHE 184

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLK--TPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
           D +LQ+GG+DQWGNI  G++   + +    + + LT PL+  A GTK GKT  GAIWL+ 
Sbjct: 185 DVQLQIGGADQWGNITAGLEYIRKQEGSEAEAYGLTIPLMLKADGTKFGKTAGGAIWLDP 244

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN--EAKKIIATEIT 307
           E T+PY F+Q+W N DD DVV + K  T L   EI+ + +    E +  EA+K +A+E+T
Sbjct: 245 EKTTPYEFYQFWLNQDDRDVVKYLKYFTFLTKEEIEALGEKIAAEPHKREAQKTLASEMT 304

Query: 308 TMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIV 357
             VHG +  + A       F   + S          ++MPT   SK+E +    L+ ++ 
Sbjct: 305 LFVHGEQALKDAEKITAALFSGDVKSLTADQIEEGFKNMPTFESSKEERNIVEWLVDVV- 363

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISN-EKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             G   S  +AR  + + A+ +N   I++ E +      FD    I +  GKK + +  L
Sbjct: 364 --GIEPSRRQAREDINNGALSMNGEKITDVEAIVTPENSFDER-FILIRKGKKKYFLIKL 420

Query: 417 C 417
            
Sbjct: 421 V 421


>gi|329944474|ref|ZP_08292639.1| tyrosine--tRNA ligase [Actinomyces sp. oral taxon 170 str. F0386]
 gi|328530239|gb|EGF57118.1| tyrosine--tRNA ligase [Actinomyces sp. oral taxon 170 str. F0386]
          Length = 420

 Score =  247 bits (630), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 145/422 (34%), Positives = 229/422 (54%), Gaps = 27/422 (6%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +D L  L  RG I Q ++   L    + G VT Y G+D TA SLH GHL  + ++  LQ 
Sbjct: 2   TDILDELQWRGLIAQHTDIDALRAALTDGDVTFYCGFDPTAPSLHHGHLVAVKVMRHLQL 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI--------QENIEKIKGIFSSFIKYG 117
            GH P++L+GG T +IGDP  R +  R + ++++        QE +E +           
Sbjct: 62  AGHHPLALVGGATGLIGDP--RAKGERSLNTKDVVAGWAVSLQEQLENLLDF-------- 111

Query: 118 TGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYM 177
           +G   A ++NN  W  ++  ID LR++G  F +  MLS + V  RL  ++ +S+ EF+Y 
Sbjct: 112 SGDNPARIVNNLDWTQAMSAIDFLRDLGKHFRMGTMLSKDIVARRLASDEGISYTEFSYQ 171

Query: 178 ILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
           +LQA D++EL + Y C L++GG+DQWGN++ G+DL  R++   +  +T+PL+T A GTK 
Sbjct: 172 VLQANDYLELYRRYGCTLEVGGNDQWGNLVGGMDLIHRVEGASVHVMTNPLITKADGTKF 231

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT--TLPMSEIDRMAKLQGKEI 295
           GK+  GAIWLN EM SPY F+Q+W  +DDADVV F K  T       E    A  +  + 
Sbjct: 232 GKSEGGAIWLNPEMLSPYAFYQFWLQVDDADVVRFLKVFTFLEREEIERLETATAENPKA 291

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECF---DMSIHSQH---MPTISISKDEVSRG 349
            EA++++A E+TT VHG E   +A  A    +   D++   +      T  ++  +V  G
Sbjct: 292 REAQRVLAHEVTTWVHGAEATAQAEAATSALWGRGDLAGIDEATILAATADLAAGDVVVG 351

Query: 350 -MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGK 408
              ++ L++ AG     N AR+ +      +NN  + +E   I  +   + G + +  G+
Sbjct: 352 ETTIVDLLISAGLERGRNAARKTIAGGGAYLNNVKVEDEATVISHEHMLAGGVVLVRKGR 411

Query: 409 KN 410
           +N
Sbjct: 412 RN 413


>gi|313159189|gb|EFR58562.1| tyrosine--tRNA ligase [Alistipes sp. HGB5]
          Length = 432

 Score =  247 bits (630), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 140/428 (32%), Positives = 231/428 (53%), Gaps = 25/428 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG IH I  P   + L  + + TAY+G D TA SLH GHL  +M+L   Q  
Sbjct: 5   NFIEELEWRGMIHTIM-PGAKEQL-EKEMTTAYLGIDPTADSLHIGHLVGVMILKHFQMC 62

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD-ALM 125
           GH+P++L+GG T +IGDPS + + R ++    ++ N E IK   +  + + +   + A++
Sbjct: 63  GHRPLALIGGATGMIGDPSGKSQERNLLDEPTLRHNQEAIKRQLAKLLDFESDAPNAAVL 122

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDF 184
           +NN  W+  I +++ +R+IG   +VN M++ +SV+ R   E   +SF EF Y ++Q +DF
Sbjct: 123 VNNYDWMKDISFLEFIRDIGKCITVNYMMAKDSVKKRFSGEGDGMSFTEFTYQLVQGFDF 182

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERL--KTPKLFALTSPLLTTASGTKMGKTLS 242
           + L +  +C++Q+GG+DQWGNI  G +L  R      + FA+T PL+T A GTK GKT S
Sbjct: 183 LHLYQTMNCKVQLGGADQWGNITTGTELIRRKLGSEAEAFAITCPLITKADGTKFGKTES 242

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKK 300
           G +WL+   TSPY F+Q+W N+ D D   + +  T L    ++ +         +   +K
Sbjct: 243 GNVWLDPRYTSPYKFYQFWLNVSDEDAKRYIRIFTLLDRETVEALTAEHEAAPHLRILQK 302

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDEV 346
            +A EITTM+H +EE EKA  A+   F  S                 + +P   I++ E+
Sbjct: 303 RLAQEITTMIHSKEEYEKAVEASAILFGGSTSEALRKLDEETLLQVFEGVPQFRIARAEL 362

Query: 347 SRGMGLLTLIV-KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLS 405
             G+  + L   KA    S  E R+ ++   + +N   +++   ++   D  +   + + 
Sbjct: 363 --GLPFVDLCAEKAQVFPSKGECRKMVQGGGVSLNKEKVADAAREVTEADLIAGKYLLVQ 420

Query: 406 FGKKNHII 413
            GKKN+ +
Sbjct: 421 KGKKNYFL 428


>gi|331701032|ref|YP_004397991.1| Tyrosyl-tRNA synthetase [Lactobacillus buchneri NRRL B-30929]
 gi|329128375|gb|AEB72928.1| Tyrosyl-tRNA synthetase [Lactobacillus buchneri NRRL B-30929]
          Length = 418

 Score =  246 bits (629), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 156/433 (36%), Positives = 231/433 (53%), Gaps = 40/433 (9%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + L  L  RG I+Q ++   L+ L +Q  V  Y+G D T  S+H GHL   M+L   Q  
Sbjct: 2   NILEDLKWRGAINQETDHEGLNELVNQKSVGIYVGIDPTGDSMHIGHLIPFMILKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN-------IEKIKGIFSSFIKYGTG 119
           GH P+ L+G GT  IGDPS +   R +    +I+ N       +EK+ G    F      
Sbjct: 62  GHHPVILIGSGTGSIGDPSGKKSERVLQSMDKIKRNEIALTAQMEKLFGEDGKF------ 115

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
                ++NN +WL  +  +D LR+ G  F+VN ML+ E V SRL  E  +SF EF Y IL
Sbjct: 116 ----EIVNNYSWLSKLSLLDFLRDYGKLFNVNTMLNKEIVASRL--EVGISFTEFTYQIL 169

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKM 237
           QA DF+ L ++ D +LQ+GG+DQWGNI  GIDL  +++ P  K F LT PLL  + GTK 
Sbjct: 170 QAIDFLHLYRHNDVQLQLGGADQWGNITSGIDLIHKIEGPDAKAFGLTIPLLLKSDGTKF 229

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI-DRMAKLQGK-EI 295
           GK+  G +WL+ + TSPY F+Q+W N DD DV+ + K  T L   EI D   K+Q + E 
Sbjct: 230 GKSEGGNVWLDPKKTSPYEFYQFWINQDDNDVIKYLKYFTFLSQDEIADLEKKVQTQPEK 289

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDE 345
            EA++ +A E+T  VHG+E  ++A       F  ++            ++MP++ +S   
Sbjct: 290 REAQRKLAEEVTEFVHGKEAVKQAEHITAALFSGNVADLTTTEIEQGFKNMPSVEVS--- 346

Query: 346 VSRGMGLLTLIVKA-GFATSTNEARRHLKSNAIKINNSIISNEKLQIK-LQDFDSTGNIK 403
            S  + ++  +V A     S  +AR  + + AI+IN   I +   +I   + FD    I 
Sbjct: 347 -SEPLNIVQWLVDATKIEKSRRQAREDITNGAIRINGERIEDVNYEINPAKKFDGKFVI- 404

Query: 404 LSFGKKNHIICHL 416
           +  GKK + +  +
Sbjct: 405 VRRGKKKYFLARV 417


>gi|312897570|ref|ZP_07756987.1| tyrosyl-tRNA synthetase [Megasphaera micronuciformis F0359]
 gi|310621203|gb|EFQ04746.1| tyrosyl-tRNA synthetase [Megasphaera micronuciformis F0359]
          Length = 418

 Score =  246 bits (629), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 148/419 (35%), Positives = 227/419 (54%), Gaps = 23/419 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           LS RG ++Q+++   L  L  +  V+ Y G D T  S+H GHL   M+L   Q  GH P 
Sbjct: 7   LSWRGAVNQMTDEAGLRKLTQEKSVSLYCGVDPTGDSMHIGHLIPFMMLKRFQLAGHHPY 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+GGGT +IGDPS R   R++   ++I EN +K+K   + F+      ++  ++NN  W
Sbjct: 67  ILIGGGTGVIGDPSGRKTERQLQTVEQIGENAKKLK---TQFVHLFGEDSNITIVNNYDW 123

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L  +  +  LR+ G  FSVN ML+ + V SRL  E  +SF EF+Y ILQ+ DF  L K  
Sbjct: 124 LSKLDLLGFLRDYGKLFSVNVMLAKDVVASRL--EAGISFTEFSYQILQSVDFHHLLKER 181

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLK--TPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
           D ++Q+GG+DQWGNI  GID+  +L+    + + LT PL+  + GTK GKT  GAIWL+ 
Sbjct: 182 DVQIQIGGADQWGNITAGIDMIHKLEGSEQEAYGLTIPLMLKSDGTKFGKTAGGAIWLDP 241

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIATEIT 307
           E TSP+ F+Q+W N DDADVV + K  T L   EI+ + K   +  E   A++ +A E+T
Sbjct: 242 EKTSPFEFYQFWLNQDDADVVRYLKYFTFLGEEEIEELEKTVQEAPEKRLAQRRLAEEVT 301

Query: 308 TMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIV 357
             VHG E  ++A       +  SI              MPT+++  +E +    ++  +V
Sbjct: 302 IFVHGTEALKEAENITEALYRGSIADLTKRELEQAFGKMPTVTVGPEEKA----VVDWLV 357

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
                 S  +AR  +++ AI IN   +++ +  ++         I +  GKK + +  +
Sbjct: 358 DTKICPSKRQAREDVQNGAITINGIKVTDLEEIVRPHKNSEGSYIIVRKGKKKYTLAKV 416


>gi|300362494|ref|ZP_07058670.1| tyrosine--tRNA ligase [Lactobacillus gasseri JV-V03]
 gi|300353485|gb|EFJ69357.1| tyrosine--tRNA ligase [Lactobacillus gasseri JV-V03]
          Length = 420

 Score =  246 bits (628), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 149/387 (38%), Positives = 209/387 (54%), Gaps = 17/387 (4%)

Query: 5   KSDFLSILSERGFIHQISNPREL-DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           K D L  L  RG I+Q ++   L   L     +  Y G D T  SLH GHL   M+L   
Sbjct: 3   KFDILEDLKWRGAINQETDEEGLRKYLAEHDDLALYCGTDPTGDSLHIGHLIPFMILKRF 62

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q  G+ P+ L+GGGT  IGDPS R   R +  +++ + N EK+    ++ +K   G  + 
Sbjct: 63  QMAGYHPVILIGGGTGSIGDPSGRKTERVLQTAEQGKHNEEKL----TAQMKKLFGTENF 118

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            + NN  WL  +  ID LR+ G FF VN M++ + V SRL  E  +SF EF+Y ILQA D
Sbjct: 119 EIKNNAEWLGKLNLIDFLRDYGKFFQVNNMINKDVVASRL--ENGISFTEFSYQILQAID 176

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK--LFALTSPLLTTASGTKMGKTL 241
           F  L K+   +LQ+GGSDQWGNI  GIDL  +L+  +   F LT PL+  A GTK GK+ 
Sbjct: 177 FYHLNKDNGVQLQIGGSDQWGNITAGIDLIHKLEGQERPAFGLTIPLMLKADGTKFGKSA 236

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAK 299
            GA+WL+ E TSPY F+Q+W N DD DVV + K  T L   EI+ +A+   KE     A+
Sbjct: 237 GGAVWLDPEKTSPYEFYQFWINQDDRDVVKYLKYFTFLSREEIEDLAEKTEKEPWKRAAQ 296

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI------SISKDEVSRGMGLL 353
           K +A E+T  VHG E  ++A       F  ++ S  +  I      + S +       ++
Sbjct: 297 KRLAEEVTKFVHGEEGLKEAQMITEALFSGNVKSLSVSQIEQALKNAPSAEATHEAKNIV 356

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKIN 380
             +V+     S  +AR  +K+ AI +N
Sbjct: 357 EFLVETKIEPSKRQAREDVKNGAIYVN 383


>gi|241068635|ref|XP_002408493.1| tyrosyl-tRNA synthetase, putative [Ixodes scapularis]
 gi|215492481|gb|EEC02122.1| tyrosyl-tRNA synthetase, putative [Ixodes scapularis]
          Length = 211

 Score =  246 bits (628), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 114/205 (55%), Positives = 152/205 (74%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           F+     +G+ HQ ++   L  +  +  + AYIG+D TA+SLH G L Q+M+L  LQ+ G
Sbjct: 4   FIEEFINKGYFHQCTDLDRLTAITKETKIAAYIGFDCTATSLHIGSLMQIMILRLLQQYG 63

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKPI ++GGGTS IGDPS +DE+R+ +   +I+ N E IK   S FIK+G GK+DA+ML+
Sbjct: 64  HKPIVIIGGGTSKIGDPSGKDEARKALTKDDIKRNAEGIKKSLSKFIKFGDGKSDAIMLD 123

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL S+ Y+D LR+ GS+FSVNRML+ +SVR RL+REQ LSFLEFNYM+LQAYDF  L
Sbjct: 124 NAEWLDSLNYLDFLRDFGSYFSVNRMLTMDSVRLRLEREQHLSFLEFNYMLLQAYDFYYL 183

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDL 212
           +K+Y+C LQ+GGSDQWGNI+ G DL
Sbjct: 184 SKHYNCSLQLGGSDQWGNIVMGADL 208


>gi|302679374|ref|XP_003029369.1| hypothetical protein SCHCODRAFT_58262 [Schizophyllum commune H4-8]
 gi|300103059|gb|EFI94466.1| hypothetical protein SCHCODRAFT_58262 [Schizophyllum commune H4-8]
          Length = 486

 Score =  246 bits (628), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 150/451 (33%), Positives = 232/451 (51%), Gaps = 41/451 (9%)

Query: 2   PAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
           P   SD    L +RGF+   + P +L     +   T Y G D TA SLHAGHL  LM LF
Sbjct: 37  PGLYSD----LKKRGFVADATRPDDLGNALQRSQQTVYAGIDPTAPSLHAGHLLYLMCLF 92

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFI----KYG 117
                GHK I L+GG T ++GDP+ R  +R       +++N+  ++     F     KY 
Sbjct: 93  RFHAAGHKIIPLIGGATGLLGDPTGRRTARDPANKSVVEQNVASLEAALRKFFEGATKYA 152

Query: 118 TGK--------TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSL 169
             +        +D  + +N  W      +D    +GS   +N ML+ ESVR+RL  +  +
Sbjct: 153 EARGISTRGVLSDLQVKSNLEWHKDFSMLDFFMVVGSHARMNTMLNKESVRTRLTSKDGM 212

Query: 170 SFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK------------ 217
           S+ EF+Y +LQAYDF  L +NY C +Q+GGSDQWGNI+ G++L  RL+            
Sbjct: 213 SYTEFSYQLLQAYDFYHLFRNYGCTIQVGGSDQWGNIVSGLELIARLEGEDAVENPSETK 272

Query: 218 -TPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRL 276
            + + F LT+PLLTTASG K GK+   A+WL+ ++TSP+ F+QYW   +D DV  + K  
Sbjct: 273 VSSRCFGLTTPLLTTASGEKFGKSAGNAVWLDTKLTSPFAFYQYWILTEDKDVEKYLKLF 332

Query: 277 TTLPMSEIDRMAKLQGKEINE--AKKIIATEITTMVH---GREEAEKAATAAM-ECFDMS 330
           T +  +EI+ + +      ++  A++ +A E+T +VH   GRE AEKA      +  DM+
Sbjct: 333 TLVSDAEIESVMQEHNAAPHKRIAQRRLAAEVTELVHQKSGRELAEKATRLMFGDAGDMT 392

Query: 331 IHS-----QHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIIS 385
                   +  P + +  +    G  + +L  + G   S +EARR  KS    +N+ ++ 
Sbjct: 393 ASEVFSALKGDPRLVLLDEGDLVGARIFSLATEHGLVASKSEARRLGKSKGFYVNHGVVG 452

Query: 386 NEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            ++  ++ +D        L  GK N ++  L
Sbjct: 453 EDR-ALEREDLIEGKFAVLRAGKSNVLVVGL 482


>gi|295424905|ref|ZP_06817618.1| tyrosine--tRNA ligase [Lactobacillus amylolyticus DSM 11664]
 gi|295065405|gb|EFG56300.1| tyrosine--tRNA ligase [Lactobacillus amylolyticus DSM 11664]
          Length = 420

 Score =  246 bits (628), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 151/427 (35%), Positives = 220/427 (51%), Gaps = 25/427 (5%)

Query: 5   KSDFLSILSERGFIHQISNPREL-DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           K D L  L  RG I+Q ++   L   L     V  Y G D T  SLH GHL   M+L   
Sbjct: 3   KFDILEDLKWRGAINQQTDEEGLRKYLAEHDDVALYCGTDPTGDSLHIGHLIPFMILKRF 62

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN----IEKIKGIFSSFIKYGTG 119
           Q  G+ P+ L+GGGT  IGDPS R   R +  + +++ N     +++K +F        G
Sbjct: 63  QMAGYHPVILIGGGTGAIGDPSGRKTERVLQTAAQVEHNEKCLTDQMKRLF--------G 114

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
             +  ++NN+ WL  +  ID LR+ G +F VN ML+ + V SRL  E  +SF EF Y IL
Sbjct: 115 TENFEIVNNKAWLGKLNLIDFLRDYGKYFQVNNMLNKDVVASRL--ENGISFTEFTYQIL 172

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK--LFALTSPLLTTASGTKM 237
           QA DF  L KN   +L++GGSDQWGNI  GIDL  +L+      F LT PL+  A GTK 
Sbjct: 173 QAIDFYHLNKNNGVQLEIGGSDQWGNITAGIDLIHKLEGADRPAFGLTIPLMLKADGTKF 232

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI-- 295
           GK+  GA+WL+ E TSPY F+Q+W N DD DVV + K  T L   EI+ +A+   KE   
Sbjct: 233 GKSAGGAVWLDPEKTSPYEFYQFWINQDDRDVVKYLKYFTFLSREEIEDLAEKTKKEPWK 292

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI------SISKDEVSRG 349
             A+K +A E+T  VHG +  ++A       F  +I    +  I      + S +  ++ 
Sbjct: 293 RAAQKKLAEEVTKFVHGEDGLKEAQMITDALFSGNIKDLSVKQIEQGLKSAPSAETDAKA 352

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
             ++  +V      S  +AR  +K+ AI +N     + +  +          + +  GK+
Sbjct: 353 KNIIDFLVDTKIEPSKRQAREDVKNGAIYVNGDREQDLEFDVDPASAFEGKYVIIRKGKR 412

Query: 410 NHIICHL 416
            + + H+
Sbjct: 413 KYTLVHV 419


>gi|296110850|ref|YP_003621231.1| tyrosine--tRNA ligase [Leuconostoc kimchii IMSNU 11154]
 gi|295832381|gb|ADG40262.1| tyrosine--tRNA ligase [Leuconostoc kimchii IMSNU 11154]
          Length = 415

 Score =  246 bits (628), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 147/394 (37%), Positives = 214/394 (54%), Gaps = 25/394 (6%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG ++Q+++   L    + G + AY+G D TA SLH GHL   M+L   Q  
Sbjct: 2   NFIEELKWRGALNQVTDEAGLLEAMTNGKIGAYVGTDPTADSLHLGHLIPFMVLKRFQNA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           G K + ++GG T  IGDP    E R+++  +++ EN    KGI +   K   G  D  ++
Sbjct: 62  GGKAVIIIGGATGAIGDPRPTTE-RKLLTQEQLSENE---KGITAQVTKL-FGDRDTRIV 116

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  +   D LR+ G  FS+N ML  + V SRL  E  +SF EF Y +LQ  DF E
Sbjct: 117 NNNDWLGKLTLTDFLRDYGKLFSINVMLKKDVVASRL--ETGISFTEFTYQVLQGIDFHE 174

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLK--TPKLFALTSPLLTTASGTKMGKTLSGA 244
           L +  D +LQ+GGSDQWGNI  GIDL   L+  T K F LT PL+T ++G K GK+   A
Sbjct: 175 LWRREDVQLQIGGSDQWGNITSGIDLIHSLEGNTAKAFGLTIPLMTDSTGKKFGKSEGNA 234

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN------EA 298
           IWL+ + TSPY F+Q+W N +DADVV + K  T L + EID +A    KEI+      +A
Sbjct: 235 IWLDPKKTSPYTFYQFWLNQNDADVVKYLKYFTFLTVEEIDALA----KEIDTNPGARQA 290

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRGMGL 352
           ++ +A E+T  VHG+   ++A   +   F   + +     I+       S D       +
Sbjct: 291 QRRLAQEVTKFVHGQTAVDEAEQLSNALFSGDVATLSAAQIADAFGGVPSFDATPESKNV 350

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISN 386
           +  +V  G   S  +AR  + + AI IN   +++
Sbjct: 351 VDFLVDGGVEQSKRQAREDVTNGAITINGVKVTD 384


>gi|331703663|ref|YP_004400350.1| Tyrosine tRNA ligase [Mycoplasma mycoides subsp. capri LC str.
           95010]
 gi|328802218|emb|CBW54372.1| Tyrosine tRNA ligase [Mycoplasma mycoides subsp. capri LC str.
           95010]
          Length = 414

 Score =  246 bits (627), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 154/419 (36%), Positives = 227/419 (54%), Gaps = 20/419 (4%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTA-YIGYDLTASSLHAGHLTQLMLLFWL 63
           K+  L  L  RG I QI+N  E  IL +Q    A Y G+D TA SLH GHL  ++ L   
Sbjct: 2   KNSILEELKWRGLIKQITN--ESKILDAQNNNDAVYCGFDPTADSLHVGHLMMIITLKRF 59

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
                KPI+L+GG T +IGDPSF+   R +    +++ NI KI       I       + 
Sbjct: 60  ADYNFKPIALIGGATGMIGDPSFKANERVLQTKDQVEHNINKISAQLKQII------PNV 113

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
             +NN TWL +I  ID LR+IG  F+++ +L+ ES+ +R+  +  LS  EF Y +LQAYD
Sbjct: 114 NFVNNNTWLSNISLIDFLRDIGKHFNLSYLLAKESIATRI--QTGLSVTEFCYTMLQAYD 171

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERL--KTPKLFALTSPLLTTASGTKMGKTL 241
           F  L KN +C +Q+GGSDQWGNI  GID       K  K   +T  LLT + G K GKT 
Sbjct: 172 FYYLYKNNNCSIQIGGSDQWGNITSGIDFISDTINKNNKAAGVTINLLTKSDGQKFGKTE 231

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AK 299
           SGA+WL+K  TS Y F+Q+W N  D D ++  K LT L   +ID + K    + ++   +
Sbjct: 232 SGAVWLDKTKTSEYEFYQFWFNQTDQDSINLLKCLTFLTKEQIDNLIKEHQNQPSKHLLQ 291

Query: 300 KIIATEITTMVHGREEAEKA-----ATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLT 354
           K +A+E+T  VH ++  +KA     A  + + F ++     M   S+   ++++ + ++ 
Sbjct: 292 KALASEMTKFVHQQQGLDKALKLTKAFFSGDLFSLTDDLFKMALNSLPNTQINKDIKVID 351

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            +++   A+S  EAR  L + AI INN II +E   I   D      + +  GKK + +
Sbjct: 352 ALIEVKAASSKREAREFLTNKAIMINNQIIEDENTLISSFDLIQNKYLLVKKGKKKYFV 410


>gi|330444439|ref|YP_004377425.1| tyrosyl-tRNA synthetase [Chlamydophila pecorum E58]
 gi|328807549|gb|AEB41722.1| tyrosyl-tRNA synthetase [Chlamydophila pecorum E58]
          Length = 412

 Score =  246 bits (627), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 151/419 (36%), Positives = 228/419 (54%), Gaps = 21/419 (5%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           F+  L +RG +   S    LD +  +  V+AY+G+D TA+SLH GH   +  L  L + G
Sbjct: 4   FVLSLKDRGILENFSAG--LDSI--EKPVSAYLGFDPTAASLHIGHWIGICFLKRLAQYG 59

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
             PI+L+GG T ++GDPS ++  R ++ ++E+ EN +KI     S  K+  G T   +LN
Sbjct: 60  MTPIALVGGATGMVGDPSGKNAERSLLSAKEVSENSQKIT---KSLAKHLPGVT---ILN 113

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W+     ID LR++G  F + +ML+ + V+ RL  E+ LS+ EF+YM+LQAYDF  L
Sbjct: 114 NIDWVQHFSVIDFLRDVGKHFRLGQMLTKDVVKQRLDSEEGLSYTEFSYMLLQAYDFYYL 173

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            KNY   LQ GGSDQWGNI  GI+   R    +   LT PLLT + G K+GKT SG IWL
Sbjct: 174 FKNYGVVLQCGGSDQWGNITLGIEFIRRHNLGQAHGLTYPLLTDSQGKKIGKTESGTIWL 233

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           + E+TSPY  +QY+  + D+DV+  A+ LT L   EI  + +    +    K+ +A  I 
Sbjct: 234 DPELTSPYELYQYFLRLPDSDVLVVARTLTMLSNEEIFALDQQFLSDPIGVKRTVAENIV 293

Query: 308 TMVHGRE---EAEKAATAAMECFDMSIHSQHMPT-------ISISKDEVSRGMGLLTLIV 357
             +HG +   EA++   +      +S+  Q+          I I K  V  G   + L V
Sbjct: 294 HAIHGEQGLSEAQRVTESIHPGALISLSEQNFQELVANGFGIKIKKSAV-LGKRWIDLCV 352

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             GF  S  EARR ++   + +NN  I + +  ++      +  + L+ GKK  ++ +L
Sbjct: 353 SVGFCNSKGEARRLIEQKGLYVNNFTIRDNQSTLEESQICFSHYVLLAQGKKRKLVLYL 411


>gi|116334768|ref|YP_796295.1| tyrosyl-tRNA synthetase [Lactobacillus brevis ATCC 367]
 gi|75381580|sp|Q7B9Y9|SYY_LACBR RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|34978541|gb|AAQ83557.1| tyrosyl-tRNA synthetase [Lactobacillus brevis]
 gi|116100115|gb|ABJ65264.1| tyrosyl-tRNA synthetase [Lactobacillus brevis ATCC 367]
          Length = 418

 Score =  246 bits (627), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 144/419 (34%), Positives = 222/419 (52%), Gaps = 23/419 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L+ RG I+Q ++   L  L S+  ++ Y G D T  S+H GHL   M++   +  GH P 
Sbjct: 7   LTWRGAINQQTDAEGLKKLTSEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFELAGHHPY 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+GG T  IGDPS R   R++    ++Q N+   K +     +   G ++  M+NN  W
Sbjct: 67  ILIGGATGSIGDPSGRKTERQLQTMDKVQHNV---KALSRQMQRLFGGDSNVTMVNNYDW 123

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L  I  +D LR+ G   ++N ML+ + V SRL  +  +SF EF Y ILQ+ DF+ L  ++
Sbjct: 124 LSKISLLDFLRDYGKLVNINTMLAKDIVASRL--DTGISFTEFTYQILQSVDFLTLHNDH 181

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLK--TPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
           + +LQ+GG+DQWGNI  GIDL  ++K     ++ LT PL+  A GTK GKT  GAIWL+ 
Sbjct: 182 NIQLQIGGADQWGNITAGIDLIHKIKGADEAVYGLTIPLMLKADGTKFGKTAGGAIWLDA 241

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATEIT 307
           + TSPY F+Q+W N DD DV+ + K  T L   EI+++A     E  +  A++ +A E+T
Sbjct: 242 DKTSPYEFYQFWLNQDDRDVIRYLKFFTFLGQDEINQLAAAVEDEPEKRLAQRRLAEEVT 301

Query: 308 TMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIV 357
             VHG E  E A   +   F   I            + +P +SI+    S    ++ L+ 
Sbjct: 302 RFVHGEEALESAQHISEILFSGDIQRLTLTEVQEAFEKVPNVSIN----SEPTNIVELLT 357

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +     S  +AR  + + AI IN    ++   Q+  +   S   + +  GKKN+ +  +
Sbjct: 358 ETAIEPSRRQAREDITNGAITINGERCTDTDAQLNPKTNFSGKFMVIRRGKKNYFLAKV 416


>gi|170016384|ref|YP_001727303.1| tyrosyl-tRNA synthetase [Leuconostoc citreum KM20]
 gi|254783614|sp|B1MW54|SYY_LEUCK RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|169803241|gb|ACA81859.1| Tyrosyl-tRNA synthetase [Leuconostoc citreum KM20]
          Length = 415

 Score =  245 bits (626), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 148/395 (37%), Positives = 213/395 (53%), Gaps = 17/395 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG ++QI++   L    + G V AY+G D TA SLH GHL   M+L   QK 
Sbjct: 2   NFIEDLKWRGALNQITDEAGLLEAMASGKVGAYVGTDPTADSLHLGHLIPFMVLKRFQKA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           G K + ++GG T  IGDP    E R+++ S+++ EN    KGI +   K   G  D  ++
Sbjct: 62  GGKAVIIIGGATGAIGDPRPTTE-RQLLSSEQLAENE---KGITAQVTKL-FGDNDTRIV 116

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  +   D LR+ G  FS+N ML  + V SRL  E  +SF EF Y +LQ  DF E
Sbjct: 117 NNNDWLGQLTLTDFLRDYGKLFSINVMLKKDVVASRL--ETGISFTEFTYQVLQGIDFHE 174

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLK--TPKLFALTSPLLTTASGTKMGKTLSGA 244
           L +  D +LQ+GGSDQWGNI  GIDL   L+    K F LT PL+T ++G K GK+   A
Sbjct: 175 LWRREDVKLQIGGSDQWGNITSGIDLIHSLEGNEAKAFGLTIPLMTDSTGKKFGKSEGNA 234

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKII 302
           IWL+ + TSPY F+Q+W N  DADVV + K  T L   EID +A+       E  A++ +
Sbjct: 235 IWLDPKKTSPYTFYQFWLNQGDADVVKYLKYFTFLGSEEIDDLAEAVATNPGERLAQRRL 294

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRGMGLLTLI 356
           A E+T  VHG    ++A   +   F  ++ +     I+       S +  +    ++  +
Sbjct: 295 AQEVTKFVHGESAVKEAEDLSTALFSGNVATLSAAQIADAFGGVPSFEAANTVKNIVDFL 354

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
           V  G   S  +AR  + + AI IN   +++   +I
Sbjct: 355 VDGGVEASKRQAREDVANGAISINGEKVTDVAAEI 389


>gi|258654244|ref|YP_003203400.1| tyrosyl-tRNA synthetase [Nakamurella multipartita DSM 44233]
 gi|258557469|gb|ACV80411.1| tyrosyl-tRNA synthetase [Nakamurella multipartita DSM 44233]
          Length = 450

 Score =  245 bits (626), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 138/396 (34%), Positives = 216/396 (54%), Gaps = 16/396 (4%)

Query: 2   PAFKSDFLSILSE---RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLM 58
           P   +   S+L E   RG +   ++   L    + G +TAY G+D TA SLH G+L QL+
Sbjct: 12  PTASAAPPSVLDELRWRGLVALTTDEHALAQALAAGPITAYCGFDPTAPSLHFGNLVQLI 71

Query: 59  LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQE-IQENIEKIKGIFSSFIKYG 117
           +L  LQ+ GH+ I L+GG T +IGDP  R  + R+++++E   E +++I+     F+++ 
Sbjct: 72  VLRHLQRAGHRVICLVGGSTGLIGDP--RPTAERVLKTKEQTAEWVDRIQQQVRPFLEF- 128

Query: 118 TGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYM 177
            G   A+M+NN  W   +  +D LREIG  F VN ML  ++V +RL  ++ +S+ EF+Y 
Sbjct: 129 AGSNPAIMVNNLDWTAPMSALDFLREIGKHFRVNTMLRKDAVAARLASDEGISYTEFSYQ 188

Query: 178 ILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
           +LQ  D++ L + Y C LQ GG DQWGN+  G DL  R     +  L +PL+T + G K 
Sbjct: 189 LLQGMDYLHLFREYGCTLQTGGQDQWGNLTAGTDLIRRATGESVHLLATPLITDSHGQKF 248

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEI 295
           GK+   A+WL+ EMTSPY F+QYW  ++DA V    +  T     EI  + +   Q  + 
Sbjct: 249 GKSEGNAVWLSPEMTSPYAFYQYWLGVEDASVGQLLRVFTDRGPDEIADLERQTAQRPQA 308

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMS-IHSQHMPTISISKDEV------SR 348
             A++++A ++TT+VHG    + A  A+   F    + S   PT+  +  E         
Sbjct: 309 RAAQRVLAGDVTTLVHGAAATDAAIAASAALFGRGDLASVDEPTLRAALTEAGLHQVSGE 368

Query: 349 GMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSII 384
              +  L+V AG   S +EARR +      +NN+ +
Sbjct: 369 VPTVAALLVAAGLVKSLSEARRVVAEGGASVNNARV 404


>gi|165881913|gb|ABY71220.1| tyrosyl-tRNA synthetase [Lactobacillus brevis]
          Length = 418

 Score =  245 bits (626), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 144/419 (34%), Positives = 222/419 (52%), Gaps = 23/419 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L+ RG I+Q ++   L  L S+  ++ Y G D T  S+H GHL   M++   +  GH P 
Sbjct: 7   LTWRGAINQQTDAEGLKKLTSEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFELAGHHPY 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+GG T  IGDPS R   R++    ++Q N+   K +     +   G ++  M+NN  W
Sbjct: 67  ILIGGATGSIGDPSGRKTERQLQTMDKVQHNV---KALSRQMQRLFGGDSNVTMVNNYDW 123

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L  I  +D LR+ G   ++N ML+ + V SRL  +  +SF EF Y ILQ+ DF+ L  ++
Sbjct: 124 LSRISLLDFLRDYGKLVNINTMLAKDIVASRL--DTGISFTEFTYQILQSVDFLTLHNDH 181

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLK--TPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
           + +LQ+GG+DQWGNI  GIDL  ++K     ++ LT PL+  A GTK GKT  GAIWL+ 
Sbjct: 182 NIQLQIGGADQWGNITAGIDLIHKIKGADEAVYGLTIPLMLKADGTKFGKTAGGAIWLDA 241

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATEIT 307
           + TSPY F+Q+W N DD DV+ + K  T L   EI+++A     E  +  A++ +A E+T
Sbjct: 242 DKTSPYEFYQFWLNQDDRDVIRYLKFFTFLGQDEINQLAATVEDEPEKRLAQRRLAEEVT 301

Query: 308 TMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIV 357
             VHG E  E A   +   F   I            + +P +SI+    S    ++ L+ 
Sbjct: 302 RFVHGEEALESAQHISEILFSGDIQRLTLTEVQEAFEKVPNVSIN----SEPTNIVELLT 357

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +     S  +AR  + + AI IN    ++   Q+  +   S   + +  GKKN+ +  +
Sbjct: 358 ETAIEPSRRQAREDITNGAITINGERCTDTDAQLNPKTNFSGKFMVIRRGKKNYFLAKV 416


>gi|191638956|ref|YP_001988122.1| Tyrosyl-tRNA synthetase (Tyrosine--tRNA ligase) (TyrRS)
           [Lactobacillus casei BL23]
 gi|239629885|ref|ZP_04672916.1| tyrosyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei
           8700:2]
 gi|190713258|emb|CAQ67264.1| Tyrosyl-tRNA synthetase (Tyrosine--tRNA ligase) (TyrRS)
           [Lactobacillus casei BL23]
 gi|239527497|gb|EEQ66498.1| tyrosyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei
           8700:2]
 gi|327383006|gb|AEA54482.1| Tyrosyl-tRNA synthetase [Lactobacillus casei LC2W]
 gi|327386192|gb|AEA57666.1| Tyrosyl-tRNA synthetase [Lactobacillus casei BD-II]
          Length = 424

 Score =  245 bits (626), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 143/388 (36%), Positives = 208/388 (53%), Gaps = 23/388 (5%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L  L  RG ++Q+++   L  L  +  V+ Y G D T  SLH GHL   M+L   Q  GH
Sbjct: 8   LDELKWRGALNQLTDEDGLRKLTEEKAVSVYCGTDPTGDSLHVGHLIPFMILKRFQLLGH 67

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           +P+ ++GGGT  IGDPS R+  R +     I  N +K+     +      G  D  +++N
Sbjct: 68  RPVIVIGGGTGSIGDPSGRNSERVLQTMDTIAANKKKLTAQMENLF----GTDDFRIVDN 123

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL  +  +D LR+ G  FSVN ML+ E V SRL  E  +S+ EF Y ILQ+ DF+ L 
Sbjct: 124 YDWLSKLSMLDFLRDYGKLFSVNSMLNKEVVASRL--ENGISYTEFTYQILQSVDFLHLF 181

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSGAIW 246
           K+ D +LQ+GG+DQWGNI  GIDL  R++ P  + + LT+PL+  A GTK GK+  GA+W
Sbjct: 182 KHEDVQLQIGGADQWGNITAGIDLIHRIEGPEARAYGLTNPLMLKADGTKFGKSAGGAVW 241

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKKIIAT 304
           L+ E TSPY F+Q+W N DDADV  F K  T L    I  +  A     E  EA++ +A 
Sbjct: 242 LDPEKTSPYEFYQFWFNQDDADVEKFLKFFTFLSRDAIAELVEATKTHPEKREAQRELAR 301

Query: 305 EITTMVHGREEAEKAATAAMECF----------DMSIHSQHMPTISISKDEVSRGMGLLT 354
            +T  VHG++  ++A   +   F          D+    +  PT+     E +  + +  
Sbjct: 302 AVTKFVHGQKAVDQAENISAALFSGDVAELSADDIKQGFKQFPTVEAP--ETAENI-VTW 358

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNS 382
           L+       S  +AR  +++ AI IN +
Sbjct: 359 LVDTTKIEPSRRQAREDIQNGAITINGT 386


>gi|88855472|ref|ZP_01130136.1| tyrosyl-tRNA synthetase [marine actinobacterium PHSC20C1]
 gi|88815379|gb|EAR25237.1| tyrosyl-tRNA synthetase [marine actinobacterium PHSC20C1]
          Length = 451

 Score =  245 bits (625), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 136/392 (34%), Positives = 222/392 (56%), Gaps = 18/392 (4%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L+ RG +H  ++   L  L     +T Y G+D TA SLH G+L QL+L+  LQ  GH+P+
Sbjct: 40  LTWRGLVHVSTDADALKELLEGDPITYYCGFDPTAPSLHLGNLVQLLLMRRLQLAGHRPL 99

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQE-IQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
            L+GG T +IGDP  R  + R +   E + E +  ++   S F+    G     M+NN  
Sbjct: 100 GLVGGATGLIGDP--RPTAERTLNDNETVAEWVSYLQAQVSKFLS-AEGDNAVRMVNNLD 156

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           W   +  ID LR++G +F V  M+  ++V +RL  +  +S+ EF+Y ++Q  DF+EL ++
Sbjct: 157 WTSPMSAIDFLRDVGKYFRVGTMIKKDAVSARLNSDAGISYTEFSYQVMQGMDFLELYRS 216

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKE 250
           Y C LQ GGSDQWGN+  G DL  + +   + A+ +PL+T + GTK GK+   A+WL+  
Sbjct: 217 YGCVLQTGGSDQWGNLTSGTDLIHKAEGASVHAIGTPLITNSDGTKFGKSEGNAVWLDDA 276

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN-----EAKKIIATE 305
           MTSPY F+Q+W N DDADVV   +RL        +R+++L+    +     EA+K +A E
Sbjct: 277 MTSPYAFYQFWLNTDDADVV---QRLKIFTFFSRERISELETAVADAPFRREAQKTLAFE 333

Query: 306 ITTMVHGREEAEKAATAAMECFDMS-IHSQHMPTISISKDEVSR-----GMGLLTLIVKA 359
           +T++VHGR+  E A +A+   F    + S    T++ +  E++         ++ L+V  
Sbjct: 334 VTSLVHGRDATEAAISASAALFGQGELASLDAETLAAALRELAHVESAGDSTIVQLLVDT 393

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
              +S +EARR +    + +NN  +++++  +
Sbjct: 394 KLVSSASEARRAISQGGVYLNNIAVADDQATV 425


>gi|294787543|ref|ZP_06752796.1| tyrosine--tRNA ligase [Parascardovia denticolens F0305]
 gi|294484899|gb|EFG32534.1| tyrosine--tRNA ligase [Parascardovia denticolens F0305]
          Length = 440

 Score =  245 bits (625), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 141/412 (34%), Positives = 222/412 (53%), Gaps = 26/412 (6%)

Query: 8   FLSILSE---RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           F S+L E   RG ++Q ++   L    +   +T Y G+D TA+SLH G+L QL+L+  LQ
Sbjct: 12  FDSVLDEIEWRGLVNQSTDRERLAAALNGDPITFYAGFDPTAASLHIGNLVQLLLMRHLQ 71

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI-QENIEKIKGIFSSFIKYGTGKTDA 123
           + GH PI+++GG T +IGDP  R    R++  +++  +  +++K     F+  G G    
Sbjct: 72  EAGHHPIAVIGGATGLIGDP--RQSGERVLNPKDVVSQWSQRLKAQVDRFLDAGGGNP-V 128

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
             +NN  W  S+  ID LR++G  F +  ML+ + V  RL  E+ +SF EF+Y +LQ  D
Sbjct: 129 RFVNNLDWTESMSVIDFLRDVGKNFRLGTMLAKDVVARRLDSEEGISFTEFSYQVLQGND 188

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           ++ L   Y   LQ GG+DQWGN+  G+DL  +++   +  +T+P++T + G K GK+  G
Sbjct: 189 YLHLFDEYGVTLQTGGADQWGNLTSGLDLIRKVRGTAVNVMTTPIITDSQGKKFGKSEGG 248

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKI 301
           AIWL+  M SPY  +Q+W N  D  VV   K  T LP  EI R+A          EA+K+
Sbjct: 249 AIWLDPTMLSPYRLYQFWFNQPDDQVVKLLKYFTFLPKEEIKRLASQVETNPGAREAQKV 308

Query: 302 IATEITTMVHGREEAEKA----------ATAAMECFDMSIHSQHMPTISISKDEVSR--- 348
           +A E+T+ VHG E A+ A              +E  D       +  I ++ D+  R   
Sbjct: 309 LAWEVTSFVHGDEAAQAAIDAAAALFGRGDVTLESIDEQTLESALDGIKVADDKGQRVFA 368

Query: 349 ----GMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
               G  ++   VKAG   S +EAR+ + S  + +NN  +++   ++K +DF
Sbjct: 369 PAQVGERVMEASVKAGLFKSLSEARKAITSGGLYLNNQRVTDINQELKEEDF 420


>gi|116495494|ref|YP_807228.1| tyrosyl-tRNA synthetase [Lactobacillus casei ATCC 334]
 gi|116105644|gb|ABJ70786.1| tyrosyl-tRNA synthetase [Lactobacillus casei ATCC 334]
          Length = 424

 Score =  245 bits (625), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 143/388 (36%), Positives = 208/388 (53%), Gaps = 23/388 (5%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L  L  RG ++Q+++   L  L  +  V+ Y G D T  SLH GHL   M+L   Q  GH
Sbjct: 8   LDELKWRGALNQLTDEDGLRKLTEEKAVSVYCGTDPTGDSLHVGHLIPFMILKRFQLLGH 67

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           +P+ ++GGGT  IGDPS R+  R +     I  N +K+     +      G  D  +++N
Sbjct: 68  RPVIVIGGGTGSIGDPSGRNSERVLQTMDTIAANKKKLTAQMENLF----GTDDFRIVDN 123

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL  +  +D LR+ G  FSVN ML+ E V SRL  E  +S+ EF Y ILQ+ DF+ L 
Sbjct: 124 YDWLSKLSMLDFLRDYGKLFSVNSMLNKEVVASRL--ENGISYTEFTYQILQSVDFLHLF 181

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSGAIW 246
           K+ D +LQ+GG+DQWGNI  GIDL  R++ P  + + LT+PL+  A GTK GK+  GA+W
Sbjct: 182 KHEDVQLQIGGADQWGNITAGIDLIHRIEGPEARAYGLTNPLMLKADGTKFGKSAGGAVW 241

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKKIIAT 304
           L+ E TSPY F+Q+W N DDADV  F K  T L    I  +  A     E  EA++ +A 
Sbjct: 242 LDPEKTSPYEFYQFWFNQDDADVEKFLKFFTFLSRDAIAELVEATKTHPEKREAQRELAR 301

Query: 305 EITTMVHGREEAEKAA----------TAAMECFDMSIHSQHMPTISISKDEVSRGMGLLT 354
            +T  VHG++  ++A            A +   D+    +  PT+     E +  + +  
Sbjct: 302 AVTKFVHGQKAVDQAENISDALFSGDVAELSADDIKQGFKQFPTVEAP--ETAENI-VTW 358

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNS 382
           L+       S  +AR  +++ AI IN +
Sbjct: 359 LVDTTKIEPSRRQAREDIQNGAITINGT 386


>gi|259048229|ref|ZP_05738630.1| tyrosine--tRNA ligase [Granulicatella adiacens ATCC 49175]
 gi|259035290|gb|EEW36545.1| tyrosine--tRNA ligase [Granulicatella adiacens ATCC 49175]
          Length = 421

 Score =  245 bits (625), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 145/421 (34%), Positives = 225/421 (53%), Gaps = 23/421 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I+Q+++   L  L ++  V+ Y G D T  S+H GHL   M+L   Q  GHKP+
Sbjct: 7   LEWRGAINQMTDEEGLRALTNEKAVSLYCGVDPTGDSMHIGHLIPFMILRRFQLAGHKPV 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSS-FIKYGTGKTDALMLNNET 130
            L+GG T  IGDPS R   R +   +++Q N+EK+       F      +    ++NN  
Sbjct: 67  ILIGGATGSIGDPSGRTSERVLQSMEQVQHNVEKLTAQMKKLFFTTDEDQATLRLVNNYD 126

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           W   +  +D LR+ G  F++N ML+ + V SRL  E  +SF EF+Y ILQ+ DF+ L K 
Sbjct: 127 WTKDLSLLDFLRDYGKHFNLNTMLAKDVVASRL--EVGISFTEFSYQILQSMDFLHLFKT 184

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLK--TPKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
            D ++Q+GG+DQWGNI  G++L  +++    + + LT PL+  + GTK GK+  GA+WL+
Sbjct: 185 EDVQVQIGGADQWGNITSGLELIRKVEGAESRAYGLTIPLMLKSDGTKFGKSAGGAVWLD 244

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN--EAKKIIATEI 306
            E T+PY F+Q+W N DD DV+ + K  T L   EI+ + +    E +  EA+  +A E+
Sbjct: 245 PEKTTPYEFYQFWLNQDDRDVIKYIKYFTFLDREEIEALEEKVATEPHKREAQIRLAEEV 304

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLI 356
           T  VHG +  E A       F  ++            ++MPT   SK+       L T +
Sbjct: 305 TRFVHGEKALEDAKKITNALFTGNVQQLTADEIEQGFKNMPTFESSKEP----QNLATWL 360

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQ-IKLQDFDSTGNIKLSFGKKNHIICH 415
           V  G   S  ++R  +++ AI IN   +++ + +  K Q F+    I +  GKK + +  
Sbjct: 361 VDLGIEPSRRQSREDIQNGAISINGEKVTDLEFEWTKEQSFEERFVI-VRRGKKKYFLVV 419

Query: 416 L 416
           L
Sbjct: 420 L 420


>gi|171742786|ref|ZP_02918593.1| hypothetical protein BIFDEN_01900 [Bifidobacterium dentium ATCC
           27678]
 gi|283456163|ref|YP_003360727.1| tyrosyl-tRNA synthetase [Bifidobacterium dentium Bd1]
 gi|171278400|gb|EDT46061.1| hypothetical protein BIFDEN_01900 [Bifidobacterium dentium ATCC
           27678]
 gi|283102797|gb|ADB09903.1| tyrS Tyrosyl-tRNA synthetase [Bifidobacterium dentium Bd1]
          Length = 440

 Score =  245 bits (625), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 147/420 (35%), Positives = 227/420 (54%), Gaps = 37/420 (8%)

Query: 5   KSDFLSILSE---RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
           ++ F S+L E   RG I Q ++   L    +   V+ Y G+D TA+SLH G+L QL+ + 
Sbjct: 9   EAGFDSVLDELEWRGLISQSTDRDRLAEALNGEPVSYYCGFDPTAASLHIGNLVQLINMR 68

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI----QENIEK-IKGIFSSFIKY 116
            LQ  GH PI+L+GG T +IGDP  R    R +  +++     E ++K I GI  +    
Sbjct: 69  HLQAAGHHPIALVGGATGLIGDP--RQSGERTLNPKDVVAGWAERLKKQIGGILET---- 122

Query: 117 GTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNY 176
             G      ++N  W  S+  ID LR++G  F +  ML+ ++V  RL  E+ +SF EF+Y
Sbjct: 123 -DGDNPVRFVSNYDWTASMTVIDFLRDVGKNFRLGTMLAKDTVARRLNSEEGISFTEFSY 181

Query: 177 MILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTK 236
            +LQ  DF+ L   Y C L++GGSDQWGN+  G+DL  +++   +   TSP++T A G K
Sbjct: 182 QVLQGNDFLHLFDEYHCVLEIGGSDQWGNLTSGLDLIHKVRGVDVNVFTSPIITDAQGKK 241

Query: 237 MGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN 296
            GK+   A+WL+  M SPY F+Q+W N  D ++ S  K  T LP +EI+R+ K    E N
Sbjct: 242 FGKSEGNAVWLDATMLSPYKFYQFWFNRPDVEMESLLKAFTFLPKTEIERLVKE--SETN 299

Query: 297 ----EAKKIIATEITTMVHGREEAEKAATAAMECF----DMSIHSQHMPTISISKDEVSR 348
               EA++ +A E+T++VHG E   +A  AA   F    D+S   +     +I   +V  
Sbjct: 300 PGAREAQRTLAWEVTSLVHGEEATNQAIEAAGALFGRGGDLSSIDEATLEAAIEGLKVED 359

Query: 349 GMG------------LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
           G G            +    +KAG   S +EAR+ +KS  + +NN  + +++  +  +DF
Sbjct: 360 GHGEKIFAPAAVGDRVAEAGMKAGLFKSISEARKTIKSGGVYLNNVRVDDQEQTLGEEDF 419


>gi|301067007|ref|YP_003789030.1| tyrosyl-tRNA synthetase [Lactobacillus casei str. Zhang]
 gi|300439414|gb|ADK19180.1| Tyrosyl-tRNA synthetase [Lactobacillus casei str. Zhang]
          Length = 424

 Score =  245 bits (625), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 143/388 (36%), Positives = 208/388 (53%), Gaps = 23/388 (5%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L  L  RG ++Q+++   L  L  +  V+ Y G D T  SLH GHL   M+L   Q  GH
Sbjct: 8   LDELKWRGALNQLTDEDGLRKLTEEKAVSLYCGTDPTGDSLHVGHLIPFMILKRFQLLGH 67

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           +P+ ++GGGT  IGDPS R+  R +     I  N +K+     +      G  D  +++N
Sbjct: 68  RPVIVIGGGTGSIGDPSGRNSERVLQTMDTIAANKKKLTAQMENLF----GTDDFRIVDN 123

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL  +  +D LR+ G  FSVN ML+ E V SRL  E  +S+ EF Y ILQ+ DF+ L 
Sbjct: 124 YDWLSKLSMLDFLRDYGKLFSVNSMLNKEVVASRL--ENGISYTEFTYQILQSVDFLHLF 181

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSGAIW 246
           K+ D +LQ+GG+DQWGNI  GIDL  R++ P  + + LT+PL+  A GTK GK+  GA+W
Sbjct: 182 KHEDVQLQIGGADQWGNITAGIDLIHRIEGPEARAYGLTNPLMLKADGTKFGKSAGGAVW 241

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKKIIAT 304
           L+ E TSPY F+Q+W N DDADV  F K  T L    I  +  A     E  EA++ +A 
Sbjct: 242 LDPEKTSPYEFYQFWFNQDDADVEKFLKFFTFLSRDAIAELVEATKTHPEKREAQRELAR 301

Query: 305 EITTMVHGREEAEKAATAAMECF----------DMSIHSQHMPTISISKDEVSRGMGLLT 354
            +T  VHG++  ++A   +   F          D+    +  PT+     E +  + +  
Sbjct: 302 AVTKFVHGQKAVDQAENISAALFSGDVAELSADDIKQGFKQFPTVEAP--ETAENI-VTW 358

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNS 382
           L+       S  +AR  +++ AI IN +
Sbjct: 359 LVDTTKIEPSRRQAREDIQNGAITINGT 386


>gi|42561212|ref|NP_975663.1| tyrosine-tRNA ligase [Mycoplasma mycoides subsp. mycoides SC str.
           PG1]
 gi|81400501|sp|Q6MST3|SYY_MYCMS RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|42492710|emb|CAE77305.1| tyrosine-tRNA ligase [Mycoplasma mycoides subsp. mycoides SC str.
           PG1]
 gi|301321009|gb|ADK69652.1| tyrosine--tRNA ligase [Mycoplasma mycoides subsp. mycoides SC str.
           Gladysdale]
          Length = 414

 Score =  245 bits (625), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 155/419 (36%), Positives = 225/419 (53%), Gaps = 20/419 (4%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTA-YIGYDLTASSLHAGHLTQLMLLFWL 63
           K+  L  L  RG I QI+N  E  IL +Q    A Y G+D TA SLH GHL  ++ L   
Sbjct: 2   KNSILEELKWRGLIKQITN--ESKILDAQNNNDAVYCGFDPTADSLHVGHLMMIITLKRF 59

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
                KPI+L+GG T +IGDPSF+   R +    +++ NI KI       I       + 
Sbjct: 60  ADYNFKPIALIGGATGMIGDPSFKANERVLQTKDQVEHNINKISAQLKQII------PNV 113

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
             +NN TWL +I  ID LR+IG  F+++ +L+ ES+ +R+  +  LS  EF Y +LQAYD
Sbjct: 114 NFVNNNTWLSNISLIDFLRDIGKHFNLSYLLAKESIATRI--QTGLSVTEFCYTMLQAYD 171

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERL--KTPKLFALTSPLLTTASGTKMGKTL 241
           F  L KN +C +Q+GGSDQWGNI  GID       K  K   LT  LLT + G K GKT 
Sbjct: 172 FYYLYKNNNCSIQIGGSDQWGNITSGIDFISDTINKNNKAAGLTINLLTKSDGQKFGKTE 231

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AK 299
           SG IWL+K  TS Y F+Q+W N  D D ++  K LT L   +ID + K    + ++   +
Sbjct: 232 SGTIWLDKTKTSEYEFYQFWFNQTDQDSINLLKCLTFLTKEQIDNLIKEHQNQSSKHLLQ 291

Query: 300 KIIATEITTMVHGREEAEKA-----ATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLT 354
           K +A+E+T  VH ++  +KA     A  + + F ++     M   S+   ++++   ++ 
Sbjct: 292 KALASEMTKFVHQQQGLDKALKLTEAFFSGDLFSLTNDLFKMALNSLPNTQINKDTKVID 351

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            +++   A+S  EAR  L + AI INN II +E   I   D      + +  GKK + +
Sbjct: 352 ALIEVKAASSKREAREFLTNKAIMINNQIIEDENTLISSFDLIQNKYLLVKKGKKKYFV 410


>gi|304382219|ref|ZP_07364726.1| tyrosine--tRNA ligase [Prevotella marshii DSM 16973]
 gi|304336576|gb|EFM02805.1| tyrosine--tRNA ligase [Prevotella marshii DSM 16973]
          Length = 432

 Score =  244 bits (624), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 146/428 (34%), Positives = 223/428 (52%), Gaps = 24/428 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG + QI    E   L  +  VTAY+G D TA SLH GHL  +M+L  LQ+ 
Sbjct: 4   NFVEELKWRGMLAQIMPGTEE--LLQKETVTAYLGTDPTADSLHIGHLCGIMMLRHLQRC 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY-GTGKTDALM 125
           GHKPI L+GG T +IGDPS + + R ++ +  +  N E IK   + F+ + GT    A M
Sbjct: 62  GHKPIILVGGATGMIGDPSGKSQERNLLDADTLYHNQECIKTQVAKFLDFDGTADNRAEM 121

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQAYD 183
           +NN  W+    ++D  R +G   +VN M++ +SV+ RL  E    LSF EF Y +LQ YD
Sbjct: 122 VNNYEWMKDFSFLDFARTVGKHITVNYMMAKDSVQKRLNGEARDGLSFTEFTYQLLQGYD 181

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERL--KTPKLFALTSPLLTTASGTKMGKTL 241
           F+ L +   C+LQ+GG+DQWGN+  G +L  R      + +ALT PL+T A G K GKT 
Sbjct: 182 FLHLYREKGCKLQLGGNDQWGNMTTGTELIRRTLGTEAEAYALTCPLITKADGNKFGKTE 241

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEA--K 299
           SG +WL+   TSPY F+Q+W N+ D D   + K  T+L    ID +     ++      +
Sbjct: 242 SGNVWLDPVRTSPYAFYQFWLNVTDDDAERYIKIFTSLEQEVIDTLIADHRQDPGRRTLQ 301

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDE 345
           + +A E+TTMVH  E    A  A+   F  +                 + +P  ++  D+
Sbjct: 302 RRLAEEVTTMVHSPEALAMAVEASNILFGKATKESLLKLNEQTLLDVFEGVPHFTLPADK 361

Query: 346 VSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLS 405
           +    G L    +    TS  E R+ ++   + +N   + + +  +  QD  +   + + 
Sbjct: 362 LGLSAGEL-FTTEIPIFTSKGEMRKLVQGGGVSLNKEKLDSFEQPVTAQDLINGRYLLVQ 420

Query: 406 FGKKNHII 413
            GKKN+ +
Sbjct: 421 RGKKNYYL 428


>gi|224283247|ref|ZP_03646569.1| tyrosyl-tRNA synthetase [Bifidobacterium bifidum NCIMB 41171]
 gi|311064520|ref|YP_003971245.1| tyrosyl-tRNA synthetase [Bifidobacterium bifidum PRL2010]
 gi|313140393|ref|ZP_07802586.1| tyrosyl-tRNA synthetase [Bifidobacterium bifidum NCIMB 41171]
 gi|310866839|gb|ADP36208.1| TyrS Tyrosyl-tRNA synthetase [Bifidobacterium bifidum PRL2010]
 gi|313132903|gb|EFR50520.1| tyrosyl-tRNA synthetase [Bifidobacterium bifidum NCIMB 41171]
          Length = 440

 Score =  244 bits (624), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 141/418 (33%), Positives = 226/418 (54%), Gaps = 33/418 (7%)

Query: 5   KSDFLSILSE---RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
           ++ F S+L E   RG I Q ++ ++L    +   VT Y G+D TA+SLH G+L QL+ + 
Sbjct: 9   EAGFDSVLEELEWRGLISQSTDRKQLAEALNGEPVTYYCGFDPTAASLHIGNLVQLINMR 68

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI----QENIEK-IKGIFSSFIKY 116
            LQ  GH PI+L+GG T +IGDP  R    R +  +++     E +++ I GI  ++   
Sbjct: 69  HLQAAGHHPIALVGGATGLIGDP--RQSGERTLNPKDVVAGWAERLKRQIGGILETY--- 123

Query: 117 GTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNY 176
             G      ++N  W   +  ID LR++G  F +  ML+ ++V  RL  E+ +SF EF+Y
Sbjct: 124 --GDNPVRFVSNYDWTAQMSVIDFLRDVGKNFRLGTMLAKDTVARRLNSEEGISFTEFSY 181

Query: 177 MILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTK 236
            +LQ  DF+ L   Y C L++GGSDQWGN+  G+DL  +++   +   TSP++T A+G K
Sbjct: 182 QVLQGNDFLHLFDEYGCTLEIGGSDQWGNLTSGMDLIRKVRGATVNVFTSPIITDATGKK 241

Query: 237 MGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKE 294
            GK+   A+WL+  M SPY F+Q+W N  D ++    K  T LP +EI+R+A+       
Sbjct: 242 FGKSEGNAVWLDATMLSPYRFYQFWFNRPDVEMEGLLKAFTFLPKAEIERLAEESRTNPG 301

Query: 295 INEAKKIIATEITTMVHGREEAEKAATAAMECF----DMSIHSQHMPTISISKDEVSRGM 350
             EA++ +A E+T+ VHG    + A  A+   F    D++   +     +I   ++    
Sbjct: 302 AREAQRTLAWEVTSFVHGEAATQAAIDASAALFGRGGDLASIDEDTLEAAIDGLKIEDES 361

Query: 351 GLLTLI------------VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
           G  T              VKAG   S +EAR+ +KS  + +NN+ +++E+  +   DF
Sbjct: 362 GAKTFASVGIDDRITEAGVKAGLFKSISEARKTIKSGGVYLNNNRVTDEEQTLGQDDF 419


>gi|306822645|ref|ZP_07456023.1| tyrosine--tRNA ligase [Bifidobacterium dentium ATCC 27679]
 gi|309800858|ref|ZP_07694990.1| tyrosine--tRNA ligase [Bifidobacterium dentium JCVIHMP022]
 gi|304554190|gb|EFM42099.1| tyrosine--tRNA ligase [Bifidobacterium dentium ATCC 27679]
 gi|308222394|gb|EFO78674.1| tyrosine--tRNA ligase [Bifidobacterium dentium JCVIHMP022]
          Length = 440

 Score =  244 bits (624), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 147/420 (35%), Positives = 227/420 (54%), Gaps = 37/420 (8%)

Query: 5   KSDFLSILSE---RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
           ++ F S+L E   RG I Q ++   L    +   V+ Y G+D TA+SLH G+L QL+ + 
Sbjct: 9   EAGFDSVLDELEWRGLISQSTDRDRLAEALNGEPVSYYCGFDPTAASLHIGNLVQLINMR 68

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI----QENIEK-IKGIFSSFIKY 116
            LQ  GH PI+L+GG T +IGDP  R    R +  +++     E ++K I GI  +    
Sbjct: 69  HLQAAGHHPIALVGGATGLIGDP--RQSGERTLNPKDVVAGWAERLKKQIGGILET---- 122

Query: 117 GTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNY 176
             G      ++N  W  S+  ID LR++G  F +  ML+ ++V  RL  E+ +SF EF+Y
Sbjct: 123 -DGDNPVRFVSNYDWTASMTVIDFLRDVGKNFRLGTMLAKDTVARRLNSEEGISFTEFSY 181

Query: 177 MILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTK 236
            +LQ  DF+ L   Y C L++GGSDQWGN+  G+DL  +++   +   TSP++T A G K
Sbjct: 182 QVLQGNDFLHLFDEYHCILEIGGSDQWGNLTSGLDLIHKVRGVDVNVFTSPIITDAQGKK 241

Query: 237 MGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN 296
            GK+   A+WL+  M SPY F+Q+W N  D ++ S  K  T LP +EI+R+ K    E N
Sbjct: 242 FGKSEGNAVWLDATMLSPYKFYQFWFNRPDVEMESLLKAFTFLPKAEIERLVKE--SETN 299

Query: 297 ----EAKKIIATEITTMVHGREEAEKAATAAMECF----DMSIHSQHMPTISISKDEVSR 348
               EA++ +A E+T++VHG E   +A  AA   F    D+S   +     +I   +V  
Sbjct: 300 PGAREAQRTLAWEVTSLVHGEEATNQAIEAAGALFGRGGDLSSIDEATLEAAIEGLKVED 359

Query: 349 GMG------------LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
           G G            +    +KAG   S +EAR+ +KS  + +NN  + +++  +  +DF
Sbjct: 360 GYGEKIFAPAAVGDRVAEAGMKAGLFKSISEARKTIKSGGVYLNNVRVDDQEQTLGEEDF 419


>gi|227534079|ref|ZP_03964128.1| tyrosyl-tRNA synthetase (tyrosine--tRNA ligase) [Lactobacillus
           paracasei subsp. paracasei ATCC 25302]
 gi|227188283|gb|EEI68350.1| tyrosyl-tRNA synthetase (tyrosine--tRNA ligase) [Lactobacillus
           paracasei subsp. paracasei ATCC 25302]
          Length = 424

 Score =  244 bits (624), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 143/388 (36%), Positives = 207/388 (53%), Gaps = 23/388 (5%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L  L  RG ++Q+++   L  L  +  V+ Y G D T  SLH GHL   M+L   Q  GH
Sbjct: 8   LDELKWRGALNQLTDEDGLRKLTEEKAVSVYCGTDPTGDSLHVGHLIPFMILKRFQLLGH 67

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           +P+ ++GGGT  IGDPS R+  R +     I  N +K+     +      G  D  +++N
Sbjct: 68  RPVIVIGGGTGSIGDPSGRNSERVLQTMDTIAANKKKLTAQMENLF----GTDDFRIVDN 123

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL  +  +D LR+ G  FSVN ML+ E V SRL  E  +S+ EF Y ILQ+ DF+ L 
Sbjct: 124 YDWLSKLSMLDFLRDYGKLFSVNSMLNKEVVASRL--ENGISYTEFTYQILQSVDFLHLF 181

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSGAIW 246
           K+ D +LQ+GG+DQWGNI  GIDL  R++ P  + + LT+PL+  A GTK GK+  GA+W
Sbjct: 182 KHEDVQLQIGGADQWGNITAGIDLIHRIEGPEARAYGLTNPLMLKADGTKFGKSAGGAVW 241

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKKIIAT 304
           L+ E TSPY F+Q+W N DDADV  F K  T L    I  +  A     E  EA++ +A 
Sbjct: 242 LDPEKTSPYEFYQFWFNQDDADVEKFLKFFTFLSRDAIAELVEATKTHPEKREAQRELAR 301

Query: 305 EITTMVHGREEAEKAATAAMECF----------DMSIHSQHMPTISISKDEVSRGMGLLT 354
            +T  VHG++  ++A   +   F          D+    +  PT+     E +  + +  
Sbjct: 302 AVTKFVHGQKAVDQAENISAALFSGDVAELSADDIKQGFKQFPTVEAP--ETAENI-VTW 358

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNS 382
           L+       S   AR  +++ AI IN +
Sbjct: 359 LVDTTKIEPSRRRAREDIQNGAITINGT 386


>gi|315226871|ref|ZP_07868659.1| tyrosine--tRNA ligase [Parascardovia denticolens DSM 10105]
 gi|315121003|gb|EFT84135.1| tyrosine--tRNA ligase [Parascardovia denticolens DSM 10105]
          Length = 471

 Score =  244 bits (623), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 143/418 (34%), Positives = 226/418 (54%), Gaps = 27/418 (6%)

Query: 3   AFK-SDFLSILSE---RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLM 58
           +FK + F S+L E   RG ++Q ++   L    +   +T Y G+D TA+SLH G+L QL+
Sbjct: 37  SFKDAGFDSVLDEIEWRGLVNQSTDRERLAAALNGDPITFYAGFDPTAASLHIGNLVQLL 96

Query: 59  LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI-QENIEKIKGIFSSFIKYG 117
           L+  LQ+ GH PI+++GG T +IGDP  R    R++  +++  +  +++K     F+  G
Sbjct: 97  LMRHLQEAGHHPIAVIGGATGLIGDP--RQSGERVLNPKDVVSQWSQRLKAQVDRFLDAG 154

Query: 118 TGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYM 177
            G      +NN  W  S+  ID LR++G  F +  ML+ + V  RL  E+ +SF EF+Y 
Sbjct: 155 GGNP-VRFVNNLDWTESMSVIDFLRDVGKNFRLGTMLAKDVVARRLDSEEGISFTEFSYQ 213

Query: 178 ILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
           +LQ  D++ L   Y   LQ GG+DQWGN+  G+DL  +++   +  +T+P++T + G K 
Sbjct: 214 VLQGNDYLHLFDEYGVTLQTGGADQWGNLTSGLDLIRKVRGTAVNVMTTPIITDSQGKKF 273

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEI 295
           GK+  GAIWL+  M SPY  +Q+W N  D  VV   K  T LP  EI R+A         
Sbjct: 274 GKSEGGAIWLDPTMLSPYRLYQFWFNQPDDQVVKLLKYFTFLPKEEIKRLASQVETNPGA 333

Query: 296 NEAKKIIATEITTMVHGREEAEKA----------ATAAMECFDMSIHSQHMPTISISKDE 345
            EA+K++A E+T+ VHG E A+ A              +E  D       +  I ++ D+
Sbjct: 334 REAQKVLAWEVTSFVHGDEAAQAAIDAAAALFGRGDVTLESIDEQTLESALDGIKVADDK 393

Query: 346 VSR-------GMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
             R       G  ++   VKAG   S +EAR+ + S  + +NN  +++   ++K +DF
Sbjct: 394 GQRVFAPAQVGERVMEASVKAGLFKSLSEARKAITSGGLYLNNQRVTDINQELKEEDF 451


>gi|297626556|ref|YP_003688319.1| Tyrosyl-tRNA synthetase (Tyrosine--tRNA ligase) (TyrRS)
           [Propionibacterium freudenreichii subsp. shermanii
           CIRM-BIA1]
 gi|296922321|emb|CBL56893.1| Tyrosyl-tRNA synthetase (Tyrosine--tRNA ligase) (TyrRS)
           [Propionibacterium freudenreichii subsp. shermanii
           CIRM-BIA1]
          Length = 422

 Score =  244 bits (623), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 146/416 (35%), Positives = 222/416 (53%), Gaps = 18/416 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L+ RGF+   ++   L      G+VT+Y+G+D TA SLH GHL QL+L   LQ+ G
Sbjct: 4   LLDDLTWRGFVADSTDRDALAAHLDAGMVTSYVGFDPTARSLHIGHLMQLILARRLQQAG 63

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQE-IQENIEKIKGIFSSFIKYGTGKTDALML 126
           H+P+ L+GG T +IGDP    E  R+M ++E +   +  +      ++ +  G+  + ++
Sbjct: 64  HRPLLLIGGSTGLIGDPKMTGE--RVMNTKETVSAWVASLAEQTKKYVSF-EGENGSRIV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   +  +D LR+IG  FSVNRML+ + V  RL  E  +S+ EF+Y++LQ++D+ E
Sbjct: 121 NNLDWTGPLSALDFLRDIGKHFSVNRMLARDVVARRL--EDGISYTEFSYVLLQSFDYAE 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + Y C LQ G  DQWGNI  G D   R     +  L +PLLT A GTK GKT  G +W
Sbjct: 179 LHRLYGCTLQTGAQDQWGNITAGADYIRRTTGDIVHGLVTPLLTKADGTKFGKTEGGTVW 238

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIAT 304
           L+ E+TSPY F Q+W N +DA V+ + K  +     E+  +A+   Q      A++ +A 
Sbjct: 239 LDPELTSPYAFHQFWLNAEDAKVMDYLKIFSFRSHDELAELAEQTEQAPYKRLAQRALAD 298

Query: 305 EITTMVHGREEAEKAATAAMECFDMS-IHSQHMPTIS-----ISKDEVSRGMGLLTLIVK 358
           ++T +VHG E  + A  AA   F    + +    TIS     +   EVS   G L  +V 
Sbjct: 299 DVTDLVHGVEARKAADEAARALFGRGELAALDDATISAVMGEVKATEVSTRDGELPTVVD 358

Query: 359 A----GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
           A    G   S + ARR ++     +NN+ +++   ++      +     L  GKK 
Sbjct: 359 ALAASGVVASKSAARRTIQEGGAYVNNAKVTDPDARLSADQLLAGRYAVLRRGKKT 414


>gi|310287607|ref|YP_003938865.1| Tyrosyl-tRNA synthetase [Bifidobacterium bifidum S17]
 gi|309251543|gb|ADO53291.1| Tyrosyl-tRNA synthetase [Bifidobacterium bifidum S17]
          Length = 440

 Score =  244 bits (623), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 141/418 (33%), Positives = 226/418 (54%), Gaps = 33/418 (7%)

Query: 5   KSDFLSILSE---RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
           ++ F S+L E   RG I Q ++ ++L    +   VT Y G+D TA+SLH G+L QL+ + 
Sbjct: 9   EAGFDSVLEELEWRGLISQSTDRKQLAEALNGEPVTYYCGFDPTAASLHIGNLVQLINMR 68

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI----QENIEK-IKGIFSSFIKY 116
            LQ  GH PI+L+GG T +IGDP  R    R +  +++     E +++ I GI  ++   
Sbjct: 69  HLQAAGHHPIALVGGATGLIGDP--RQSGERTLNPKDVVAGWAERLKRQIGGILETY--- 123

Query: 117 GTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNY 176
             G      ++N  W   +  ID LR++G  F +  ML+ ++V  RL  E+ +SF EF+Y
Sbjct: 124 --GDNPVRFVSNYDWTAQMSVIDFLRDVGKNFRLGTMLAKDTVARRLNSEEGISFTEFSY 181

Query: 177 MILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTK 236
            +LQ  DF+ L   Y C L++GGSDQWGN+  G+DL  +++   +   TSP++T A+G K
Sbjct: 182 QVLQGNDFLHLFDEYGCTLEIGGSDQWGNLTSGMDLIRKVRGVTVNVFTSPIITDATGKK 241

Query: 237 MGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKE 294
            GK+   A+WL+  M SPY F+Q+W N  D ++    K  T LP +EI+R+A+       
Sbjct: 242 FGKSEGNAVWLDATMLSPYRFYQFWFNRPDVEMEGLLKAFTFLPKAEIERLAEESRTNPG 301

Query: 295 INEAKKIIATEITTMVHGREEAEKAATAAMECF----DMSIHSQHMPTISISKDEVSRGM 350
             EA++ +A E+T+ VHG    + A  A+   F    D++   +     +I   ++    
Sbjct: 302 AREAQRTLAWEVTSFVHGEAATQAAIDASAALFGRGGDLASIDEDTLEAAIDGLKIEDES 361

Query: 351 GLLTLI------------VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
           G  T              VKAG   S +EAR+ +KS  + +NN+ +++E+  +   DF
Sbjct: 362 GAKTFASVGIDDRITEAGVKAGLFKSISEARKTIKSGGVYLNNNRVTDEEQTLGQDDF 419


>gi|329768070|ref|ZP_08259580.1| tyrosyl-tRNA synthetase [Gemella haemolysans M341]
 gi|328838338|gb|EGF87948.1| tyrosyl-tRNA synthetase [Gemella haemolysans M341]
          Length = 417

 Score =  244 bits (622), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 136/422 (32%), Positives = 229/422 (54%), Gaps = 22/422 (5%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S  L  L  R  ++Q ++   +  L  +  V+ Y G D T +SLH GHL   + L   Q+
Sbjct: 2   SKLLEDLKYRDLVYQQTDEEGIKELLEKESVSIYCGTDPTGNSLHIGHLLPFLTLKRFQQ 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP+ L+GGGT IIGDPS R E R++   + I++N  +++G   +  +   G  +   
Sbjct: 62  HGHKPVILVGGGTGIIGDPSGRSEERQLQSLEVIEDNASRLEGQLRNIFR---GDDNIEF 118

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  WL  +  I+ LR+ G   ++N +L+ +S+ SRL  +  LSF EF+Y ILQ  D+ 
Sbjct: 119 VNNRDWLGKLSMIEFLRDYGKLVNINYLLAKDSISSRL--DNGLSFTEFSYTILQGIDYA 176

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLLTTASGTKMGKTLSGA 244
            L ++++ +LQ+GGSDQWGNI  G+++  +L+   + +  T PL+  + GTK GK+  GA
Sbjct: 177 YLNEHHNVKLQIGGSDQWGNITTGLEIMRKLRGDVEAYGFTIPLMLKSDGTKFGKSTGGA 236

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE--INEAKKII 302
           +WL+ E T+PY F+Q+W N  D +VVS  K+ T L   +I+ + +   KE  +  A+K +
Sbjct: 237 VWLDPEQTTPYEFYQFWFNTADTEVVSALKKFTFLEKDQIEALRESSEKEPHLRLAQKAL 296

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGL 352
           A E+  +VHG +  E A       F  +I            + MP   + K E +    +
Sbjct: 297 AEEMVKIVHGEKALESALNITKALFSGNIKELTHDELKEAVKGMPKSELEKKEYN----I 352

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           +  +V++    S  +AR  + + A+ +N   +++ +  ++ +D    G   L  GKK ++
Sbjct: 353 VDFLVESNLVQSKRQAREDVNNGAVYVNGDKVTDLEYVVEAKDRLEDGFTVLRRGKKKYL 412

Query: 413 IC 414
           + 
Sbjct: 413 LV 414


>gi|256844327|ref|ZP_05549813.1| tyrosyl-tRNA synthetase [Lactobacillus crispatus 125-2-CHN]
 gi|295692058|ref|YP_003600668.1| tyrosyl-tRNA synthetase [Lactobacillus crispatus ST1]
 gi|256613405|gb|EEU18608.1| tyrosyl-tRNA synthetase [Lactobacillus crispatus 125-2-CHN]
 gi|295030164|emb|CBL49643.1| Tyrosyl-tRNA synthetase [Lactobacillus crispatus ST1]
          Length = 420

 Score =  244 bits (622), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 148/387 (38%), Positives = 206/387 (53%), Gaps = 17/387 (4%)

Query: 5   KSDFLSILSERGFIHQISNPREL-DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           K D L  L  RG I+Q ++   L   L     +  Y G D T  SLH GHL   M+L   
Sbjct: 3   KFDILEDLKWRGAINQETDEEGLRKYLAEHDDLALYCGTDPTGDSLHIGHLIPFMILKRF 62

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q  G+ P+ L+GGGT  IGDPS R   R +  +++++ N E +    ++ +K   G  + 
Sbjct: 63  QMAGYHPVILIGGGTGAIGDPSGRKTERTLQTAEQVKHNEESL----TNQMKKLFGTENF 118

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            + NN  WL  +  ID LR+ G FF VN M++ + V SRL  E  +SF EF Y ILQA D
Sbjct: 119 EIRNNAEWLSKLNLIDFLRDYGKFFQVNNMINKDVVASRL--ENGISFTEFTYQILQAID 176

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK--LFALTSPLLTTASGTKMGKTL 241
           F  L K+   +LQ+GGSDQWGNI  GIDL  +L+      F LT PL+  A GTK GK+ 
Sbjct: 177 FYHLNKDDGVQLQIGGSDQWGNITAGIDLIHKLEGADRPAFGLTIPLMLKADGTKFGKSA 236

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAK 299
            GA+WL+ E TSPY F+Q+W N DD DVV + K  T L   EI+ +A+   KE     A+
Sbjct: 237 GGAVWLDPEKTSPYEFYQFWINQDDRDVVKYLKYFTFLSREEIEDLAEKTEKEPWKRAAQ 296

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI------SISKDEVSRGMGLL 353
           K +A E+T  VHG    E+A       F  +I +  +  I      + S +  +    ++
Sbjct: 297 KKLAEEVTKFVHGEAGLEEAKMITDALFSGNIKNLSVAQIEQGLKNAPSAEAGNEKKNIV 356

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKIN 380
             +V      S  +AR  +K+ AI +N
Sbjct: 357 DFLVDTKIEPSKRQAREDVKNGAIYVN 383


>gi|332675822|gb|AEE72638.1| tyrosine--tRNA ligase [Propionibacterium acnes 266]
          Length = 418

 Score =  244 bits (622), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 145/401 (36%), Positives = 217/401 (54%), Gaps = 14/401 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           SD L  L  RG +   ++   L+   +QG VT Y+G+D TA SLH GHL QLML+  LQ+
Sbjct: 2   SDLLDDLEWRGLVADSTDREALEAHLAQGPVTFYVGFDPTAKSLHIGHLVQLMLVRALQE 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP+ L+GG T +IGDP    E R M   + + E +E IK   S ++    G+  A +
Sbjct: 62  RGHKPLLLVGGATGLIGDPKMTGE-RHMNDREVVAEWVESIKDQVSKYVDT-DGRNAAQI 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  W      +DLLR++G  FSVNRML+ + V  RL  E  +S+ EF+Y++LQ+ DF 
Sbjct: 120 VNNYDWTVKYTALDLLRDVGKHFSVNRMLARDVVARRL--ESGISYTEFSYVLLQSLDFC 177

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           EL K Y C LQ G  DQWGNI  G +   +     +  L +PL+T A GTK GKT SG +
Sbjct: 178 ELHKRYGCTLQTGAQDQWGNITAGAEFIRKTTGDVVHGLVTPLITKADGTKYGKTESGTV 237

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIA 303
           W++ E+TS Y F Q++ N +D+ V+ + K  +     EI+ +A+   +E     A+  +A
Sbjct: 238 WVDPELTSAYAFHQFFLNAEDSKVIEYLKIFSPRSREEIEDLARKTEEEPWRRAAQHCLA 297

Query: 304 TEITTMVHGREEAEKAATAAMECFDMS-IHSQHMPTISISKDEVS----RGMGLLTLI-- 356
            ++T +VHG E+ + A  AA   F    +      T+    DE+      G    T++  
Sbjct: 298 DDLTDLVHGVEQRKAAEAAAQAIFGRGELRDLDERTVLSLSDELGAAHHEGGEYPTVVGA 357

Query: 357 -VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
            V AG   + +  RR +      +NN  +++   ++   DF
Sbjct: 358 MVAAGVVDTKSAGRRAVAEGGAYLNNVKVADPDQRLTDDDF 398


>gi|224540975|ref|ZP_03681514.1| hypothetical protein CATMIT_00126 [Catenibacterium mitsuokai DSM
           15897]
 gi|224526126|gb|EEF95231.1| hypothetical protein CATMIT_00126 [Catenibacterium mitsuokai DSM
           15897]
          Length = 408

 Score =  244 bits (622), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 140/396 (35%), Positives = 219/396 (55%), Gaps = 28/396 (7%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           F   L  RG I  +S+    D L + G+ T YIG D T  SLH GH +  ++   L+  G
Sbjct: 3   FYDELVWRGLIKDVSSEDLKDKLNAGGM-TFYIGTDPTGDSLHIGHFSSFLMSKRLKDAG 61

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H PI L+GG T  IGDP    E R M+  +++Q N + +K        +        ++N
Sbjct: 62  HHPILLVGGATGQIGDPKPTTE-RPMITKEQVQHNFDCLKKQAEDLFGFE-------VVN 113

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W   I +ID LR+ G +F++N MLS + ++ RL  ++ ++F EF+YMI+QA DF  L
Sbjct: 114 NLDWSKDINFIDWLRDYGKYFNINYMLSKDIIKRRL--DEGITFTEFSYMIMQAMDFYYL 171

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            +N  C LQ+ G DQWGNI  GI+L  +    + +  T PLLT + GTK GK+   AIWL
Sbjct: 172 HENKGCDLQVAGQDQWGNITAGIELIRKKTGDEAYGFTMPLLTKSDGTKFGKSEGNAIWL 231

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE--INEAKKIIATE 305
           ++E TSPY  +Q++ N +D+ V+ + K LT L   EI+ + +    E  + +A K +A E
Sbjct: 232 DREKTSPYEMYQFFINSEDSKVIDYLKYLTFLSKEEIEALEESNKNEPHLRKAHKALAKE 291

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTL 355
           + T +HG +  E+A   + + F   I S            +P+I +++DE      +L +
Sbjct: 292 VITFIHGADAYEEAVNISEKLFSGDIKSMTYEQVKQCFNGVPSIDVTEDEQ-----ILNV 346

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
           +VKAG A+S  EAR+ +K  ++ +N   +++EK  +
Sbjct: 347 LVKAGAASSNREARQFVKGGSVLVNGEKVTDEKFVV 382


>gi|282854550|ref|ZP_06263885.1| tyrosine--tRNA ligase [Propionibacterium acnes J139]
 gi|289426416|ref|ZP_06428159.1| tyrosine--tRNA ligase [Propionibacterium acnes SK187]
 gi|289427762|ref|ZP_06429473.1| tyrosine--tRNA ligase [Propionibacterium acnes J165]
 gi|295130942|ref|YP_003581605.1| tyrosine--tRNA ligase [Propionibacterium acnes SK137]
 gi|282582132|gb|EFB87514.1| tyrosine--tRNA ligase [Propionibacterium acnes J139]
 gi|289153144|gb|EFD01862.1| tyrosine--tRNA ligase [Propionibacterium acnes SK187]
 gi|289159026|gb|EFD07219.1| tyrosine--tRNA ligase [Propionibacterium acnes J165]
 gi|291377292|gb|ADE01147.1| tyrosine--tRNA ligase [Propionibacterium acnes SK137]
          Length = 418

 Score =  243 bits (621), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 145/401 (36%), Positives = 217/401 (54%), Gaps = 14/401 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           SD L  L  RG +   ++   L+   +QG VT Y+G+D TA SLH GHL QLML+  LQ+
Sbjct: 2   SDLLDDLEWRGLVADSTDREALEAHLAQGPVTFYVGFDPTAKSLHIGHLVQLMLVRALQE 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP+ L+GG T +IGDP    E R M   + + E +E IK   S ++    G+  A +
Sbjct: 62  RGHKPLLLVGGATGLIGDPKMTGE-RHMNDREVVAEWVESIKDQVSKYVDT-DGRNAAQI 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  W      +DLLR++G  FSVNRML+ + V  RL  E  +S+ EF+Y++LQ+ DF 
Sbjct: 120 VNNYDWTVKYTALDLLRDVGKHFSVNRMLARDVVARRL--ESGISYTEFSYVLLQSLDFY 177

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           EL K Y C LQ G  DQWGNI  G +   +     +  L +PL+T A GTK GKT SG +
Sbjct: 178 ELHKRYGCTLQTGAQDQWGNITAGAEFIRKTTGDVVHGLVTPLITKADGTKYGKTESGTV 237

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIA 303
           W++ E+TS Y F Q++ N +D+ V+ + K  +     EI+ +A+   +E     A+  +A
Sbjct: 238 WVDPELTSAYAFHQFFLNAEDSKVIEYLKIFSPRSREEIEDLARKTEEEPWRRAAQHCLA 297

Query: 304 TEITTMVHGREEAEKAATAAMECFDMS-IHSQHMPTISISKDEVS----RGMGLLTLI-- 356
            ++T +VHG E+ + A  AA   F    +      T+    DE+      G    T++  
Sbjct: 298 DDLTDLVHGVEQRKAAEAAAQAIFGRGELRDLDERTVLSLSDELGAAHHEGGEYPTVVGA 357

Query: 357 -VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
            V AG   + +  RR +      +NN  +++   ++   DF
Sbjct: 358 MVAAGVVDTKSAGRRAVAEGGAYLNNVKVADPDQRLTDDDF 398


>gi|328464009|gb|EGF35505.1| tyrosyl-tRNA synthetase [Lactobacillus helveticus MTCC 5463]
          Length = 420

 Score =  243 bits (621), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 150/387 (38%), Positives = 204/387 (52%), Gaps = 17/387 (4%)

Query: 5   KSDFLSILSERGFIHQISNPREL-DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           K D L  L  RG I+Q ++   L   L     +  Y G D T  SLH GHL   M+L   
Sbjct: 3   KFDILEDLKWRGAINQETDEEGLRKYLAEHDDLALYCGTDPTGDSLHIGHLIPFMILKRF 62

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q  G+ P+ L+GGGT  IGDPS R   R +  + +++ N E      ++ +K   G  + 
Sbjct: 63  QMAGYHPVILIGGGTGAIGDPSGRKTERTLQTADQVKHNEE----CLTNQMKKLFGTENF 118

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            + NN  WL  +  ID LR+ G FF VN M++ E V SRL  E  +SF EF Y ILQA D
Sbjct: 119 EIRNNAEWLGKLNLIDFLRDYGKFFQVNNMINKEVVASRL--ENGISFTEFTYQILQAID 176

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK--LFALTSPLLTTASGTKMGKTL 241
           F  L K+   +LQ+GGSDQWGNI  GIDL  +L+      F LT PL+  A GTK GK+ 
Sbjct: 177 FYHLNKDDGVQLQIGGSDQWGNITAGIDLIHKLEGADRPAFGLTIPLMLKADGTKFGKSA 236

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAK 299
            GA+WL+ E TSPY F+Q+W N DD DVV + K  T L   EI+ +A+   KE     A+
Sbjct: 237 GGAVWLDPEKTSPYEFYQFWINQDDRDVVKYLKYFTFLSRKEIEDLAEKTEKEPWKRAAQ 296

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI------SISKDEVSRGMGLL 353
           K +A E+T  VHG    ++A       F  +I +  +  I      + S +  S    L+
Sbjct: 297 KRLAEEVTKFVHGEAGLKEAQMITDALFSGNIKNLSVTQIEQGLKNAPSAEAGSEKKNLV 356

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKIN 380
             +V      S  +AR  +K+ AI +N
Sbjct: 357 DFLVDTKIEPSKRQAREDIKNGAIYVN 383


>gi|225352193|ref|ZP_03743216.1| hypothetical protein BIFPSEUDO_03809 [Bifidobacterium
           pseudocatenulatum DSM 20438]
 gi|225157440|gb|EEG70779.1| hypothetical protein BIFPSEUDO_03809 [Bifidobacterium
           pseudocatenulatum DSM 20438]
          Length = 435

 Score =  243 bits (621), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 137/409 (33%), Positives = 222/409 (54%), Gaps = 20/409 (4%)

Query: 5   KSDFLSILSE---RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
           ++ F S+L E   RG I Q ++   L    +   ++ Y G+D TA+SLH G+L QL+ + 
Sbjct: 9   EAGFESVLDELEWRGLISQSTDRDRLAEALNGDPISYYCGFDPTAASLHIGNLVQLINMR 68

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN-IEKIKGIFSSFIKYGTGK 120
            LQ  GH PI+L+GG T +IGDP  R    R +  +++     E++K      ++   G 
Sbjct: 69  HLQAAGHHPIALVGGATGLIGDP--RQSGERTLNPKDVVAGWAERLKAQIGGILEV-EGS 125

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
                ++N  W+ S+  ID LR++G  F +  ML+ ++V  RL  E  +SF EF+Y +LQ
Sbjct: 126 NPVRFVSNYDWIASMNVIDFLRDVGKNFRLGTMLAKDTVARRLNSEDGISFTEFSYQVLQ 185

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
             DF+ L   Y C L++GGSDQWGN+  G+DL  +++   +   TSP++T A G K GK+
Sbjct: 186 GNDFLHLFDEYHCVLELGGSDQWGNLTSGLDLIHKVRGVDVNVFTSPIITDAQGKKFGKS 245

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEA 298
              A+WL+  M SPY F+Q+W N  D+++ +  K  T LP +EI+R+ +         EA
Sbjct: 246 EGNAVWLDGTMLSPYKFYQFWFNRPDSEMENLLKVFTFLPKAEIERLVEESKTNPGAREA 305

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECF---------DMSIHSQHMPTISISKDEVSRG 349
           ++ +A E+T++VHG E   +A  AA   F         D S     +  + I  +     
Sbjct: 306 QRTLAWEVTSLVHGEEATRQAIEAAGALFGRGGDLAGVDESTLEAALDGVKIDGEFAKAA 365

Query: 350 MG--LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
           +G  +    +KAG   S +EAR+ +K+  + +NN+ + +E+  +   DF
Sbjct: 366 VGDRVAEAGMKAGLFKSISEARKTIKAGGVYLNNARVKDEEQVLNENDF 414


>gi|313674441|ref|YP_004052437.1| tyrosyl-tRNA synthetase [Marivirga tractuosa DSM 4126]
 gi|312941139|gb|ADR20329.1| tyrosyl-tRNA synthetase [Marivirga tractuosa DSM 4126]
          Length = 433

 Score =  243 bits (621), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 139/417 (33%), Positives = 227/417 (54%), Gaps = 34/417 (8%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           + +F+  L  RG IH +    E  +  ++ + +AY+G D TA SLH GHL  +M+L   Q
Sbjct: 2   QKNFIEELQWRGMIHDMMPGIEKQL--AKEMSSAYVGIDPTADSLHIGHLVGVMMLKHFQ 59

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD-A 123
             GHKPI L+GG T +IGDPS + + R ++    ++ N   IK    +F+ +   + + A
Sbjct: 60  DAGHKPIILLGGATGMIGDPSGKSQERNLLDEPTLRHNEASIKAQIKNFLDFDAKEDNSA 119

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQS--LSFLEFNYMILQA 181
            ++NN  W+    ++  +R++G   +VN M++ +SV+ RL  E S  +SF EF Y ++Q 
Sbjct: 120 ELVNNYDWMKDFSFLGFIRDVGKHITVNYMMAKDSVKKRLSSESSEGMSFTEFTYQLVQG 179

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
           YDF+ L +  +C+LQMGGSDQWGNI  G ++  ++   + FA+T PL+  A G+K GKT 
Sbjct: 180 YDFLHLFRKKNCKLQMGGSDQWGNITTGTEMIRKMDQGEAFAVTCPLIKKADGSKFGKTE 239

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEA--- 298
           +G IWL+ + TSPY F+Q+W N  D D+ +F +  +T   +EI+ +     KE NEA   
Sbjct: 240 TGNIWLDPKKTSPYKFYQFWLNASDEDMSNFIRIFSTKGKAEIEALE----KEHNEAPHL 295

Query: 299 ---KKIIATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISI 341
              +K +A E+T  VH +E  + A  A+   F  S                 + +P ++I
Sbjct: 296 RVLQKALAEELTVRVHSQEALDMALKASSILFGKSTTEELQSIDEDTLLSVFEGVPQVNI 355

Query: 342 SK---DEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSII--SNEKLQIKL 393
           +K   D+       L+ + +     S  EA++ +K   + IN   +  +N  ++I L
Sbjct: 356 TKSDLDKTENVTDFLSELTQGIIFPSKGEAKKMIKGGGVSINKEKVLDANAPVEISL 412


>gi|223044443|ref|ZP_03614475.1| tyrosyl-tRNA synthetase [Staphylococcus capitis SK14]
 gi|222442172|gb|EEE48285.1| tyrosyl-tRNA synthetase [Staphylococcus capitis SK14]
          Length = 417

 Score =  243 bits (621), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 143/389 (36%), Positives = 214/389 (55%), Gaps = 23/389 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R  I+Q +N   L  L     ++ Y G D T  S+H GHL   M++   Q  GHKP 
Sbjct: 7   LQWRDAINQQTNEEGLRELVENNSISLYCGVDPTGGSMHIGHLIPFMMMKRFQLAGHKPF 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+GG T  IGDPS R   R +   + +QEN+E   G+ S   K      +  ++NN  W
Sbjct: 67  ILIGGATGTIGDPSGRTSERMLQTLETVQENVE---GLSSQMKKLFGKDANVTIVNNYDW 123

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L S+  +D LR  G  F++N ML+ + V SRL  ++ +SF EF Y ILQ+ DF+ L KN+
Sbjct: 124 LSSLTLLDFLRSYGKDFNINTMLAKDIVASRL--DKGISFTEFAYQILQSIDFLHLFKNH 181

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLK--TPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
           + +LQ+GG+DQWGNI  G+DL  + +    K+F LT PL+  A GTK GKT  GAIWL+ 
Sbjct: 182 NVQLQIGGADQWGNITSGLDLIRKKEGNDAKVFGLTIPLMLKADGTKFGKTAGGAIWLDP 241

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM-AKLQGK-EINEAKKIIATEIT 307
           + TSPY F+Q+W N DD DV+ + K  T L   EID +  K++ + E  EA+K +A E+T
Sbjct: 242 KRTSPYEFYQFWLNQDDRDVIKYLKFFTFLDKEEIDFLEEKVKNEPEKREAQKRLAEEVT 301

Query: 308 TMVHGREEAEKAATAAMECF-----DMSIHS-----QHMPTISISKDEVSRGMGLLTLIV 357
             VH     ++A       F     D+++       Q+MP+ + +    ++   ++  +V
Sbjct: 302 KFVHDEAALQEAQKITQALFSGNVKDLTVKEIEQGLQNMPSFNTT----NKTKNIVDWLV 357

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISN 386
           +     S  +AR  + + AI IN   +++
Sbjct: 358 EINCEPSKRQAREDVINGAININGEKVTD 386


>gi|315037444|ref|YP_004031012.1| tyrosyl-tRNA synthetase [Lactobacillus amylovorus GRL 1112]
 gi|325955902|ref|YP_004286512.1| tyrosyl-tRNA synthetase [Lactobacillus acidophilus 30SC]
 gi|312275577|gb|ADQ58217.1| tyrosyl-tRNA synthetase [Lactobacillus amylovorus GRL 1112]
 gi|325332467|gb|ADZ06375.1| tyrosyl-tRNA synthetase [Lactobacillus acidophilus 30SC]
 gi|327182737|gb|AEA31184.1| tyrosyl-tRNA synthetase [Lactobacillus amylovorus GRL 1118]
          Length = 420

 Score =  243 bits (620), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 148/387 (38%), Positives = 204/387 (52%), Gaps = 17/387 (4%)

Query: 5   KSDFLSILSERGFIHQISNPRELD-ILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           K D L  L  RG I+Q ++   L   L     +  Y G D T  SLH GHL   M+L   
Sbjct: 3   KFDILEDLKWRGAINQQTDEEGLKKYLAEHDDLALYCGTDPTGDSLHIGHLIPFMILKRF 62

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q  G+ P+ L+GGGT  IGDPS R   R +  + +++ N E +    ++ +K   G  + 
Sbjct: 63  QMAGYHPVILIGGGTGAIGDPSGRKTERVLQTADQVKHNEESL----TNQMKKLFGTENF 118

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            + +N  WL  +  ID LR+ G +F VN M++ + V SRL  E  +SF EF Y ILQA D
Sbjct: 119 EIRDNAEWLGKLNLIDFLRDYGKYFQVNNMINKDVVASRL--ENGISFTEFTYQILQAID 176

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK--LFALTSPLLTTASGTKMGKTL 241
           F  L K    +LQ+GGSDQWGNI  GIDL  +L+      F LT PL+  A GTK GK+ 
Sbjct: 177 FYHLNKEDGVQLQIGGSDQWGNITAGIDLIHKLEGADRPAFGLTIPLMLKADGTKFGKSA 236

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAK 299
            GA+WL+ E TSPY F+Q+W N DD DVV + K  T L   EI+ +A+   KE     A+
Sbjct: 237 GGAVWLDPEKTSPYEFYQFWINQDDRDVVKYLKYFTFLSHEEIEDLAEKTEKEPWKRAAQ 296

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI------SISKDEVSRGMGLL 353
           K +A E+T  VHG    ++A       F   I +  +P I      + S +  S    L+
Sbjct: 297 KKLAEEVTKFVHGEAGLKEAQMITDALFSGDIKNLSVPQIEQGLKNAPSAEAGSEKKNLV 356

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKIN 380
             +V      S  +AR  +K+ AI +N
Sbjct: 357 DFLVDTKIEPSKRQAREDIKNGAIYVN 383


>gi|50842886|ref|YP_056113.1| tyrosyl-tRNA synthetase [Propionibacterium acnes KPA171202]
 gi|81611507|sp|Q6A7W0|SYY_PROAC RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|50840488|gb|AAT83155.1| tyrosyl-tRNA synthetase [Propionibacterium acnes KPA171202]
          Length = 418

 Score =  243 bits (620), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 145/401 (36%), Positives = 217/401 (54%), Gaps = 14/401 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           SD L  L  RG +   ++   L+   +QG VT Y+G+D TA SLH GHL QLML+  LQ+
Sbjct: 2   SDLLDDLEWRGLVADSTDREALEAHLAQGPVTFYVGFDPTAKSLHIGHLVQLMLVRALQE 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP+ L+GG T +IGDP    E R M   + + E +E IK   S ++    G+  A +
Sbjct: 62  RGHKPLLLVGGATGLIGDPKMTGE-RHMNDREVVAEWVESIKDQVSKYVDT-DGRNAAQI 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  W      +DLLR++G  FSVNRML+ + V  RL  E  +S+ EF+Y++LQ+ DF 
Sbjct: 120 VNNYDWTVKYTALDLLRDVGKHFSVNRMLARDVVARRL--ESGISYTEFSYVLLQSLDFY 177

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           EL K Y C LQ G  DQWGNI  G +   +     +  L +PL+T A GTK GKT SG +
Sbjct: 178 ELHKRYGCTLQTGAQDQWGNITAGAEFIRKTTGDVVHGLVTPLITKADGTKYGKTESGTV 237

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIA 303
           W++ E+TS Y F Q++ N +D+ V+ + K  +     EI+ +A+   +E     A+  +A
Sbjct: 238 WVDPELTSAYAFHQFFLNAEDSKVIEYLKIFSPRSREEIEDLARKTEEEPWRRAAQHCLA 297

Query: 304 TEITTMVHGREEAEKAATAAMECFDMS-IHSQHMPTISISKDEVS----RGMGLLTLI-- 356
            ++T +VHG E+ + A  AA   F    +      T+    DE+      G    T++  
Sbjct: 298 DDLTDLVHGVEQRKAAEAAAQAIFGRGELRDLDERTVLSLSDELGAAHHEGGEYPTVVGA 357

Query: 357 -VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
            V AG   + +  RR +      +NN  +++   ++   DF
Sbjct: 358 MVAAGVVDTKSGGRRAVAEGGAYLNNVKVADPDQRLTDDDF 398


>gi|300725862|ref|ZP_07059326.1| tyrosine--tRNA ligase [Prevotella bryantii B14]
 gi|299776850|gb|EFI73396.1| tyrosine--tRNA ligase [Prevotella bryantii B14]
          Length = 432

 Score =  243 bits (620), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 143/430 (33%), Positives = 227/430 (52%), Gaps = 27/430 (6%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG + QI    E  ++  + + +AY+G D TA SLH GHL  +M+L  LQ+ 
Sbjct: 3   NFVEELKWRGMLAQIMPGTEEYLM--ENMTSAYLGTDPTADSLHIGHLCGIMMLRHLQRC 60

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY-GTGKTDALM 125
           GHKP  L+GG T +IGDPS + + R ++ ++ +  N E IK   S F+ + GT    A M
Sbjct: 61  GHKPYLLVGGATGMIGDPSGKSQERNLLDTETLYHNQEAIKKQVSKFLDFDGTAPNKAEM 120

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK--REQSLSFLEFNYMILQAYD 183
           +NN  W+    ++D  RE+G   +VN M++ +SV+ RL       LSF EF Y +LQ YD
Sbjct: 121 VNNYDWMKDFTFLDFAREVGKHITVNYMMAKDSVQQRLNGTARDGLSFTEFTYQLLQGYD 180

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERL--KTPKLFALTSPLLTTASGTKMGKTL 241
           F+   +NY  RLQ+GG+DQWGN+  G +L  R      + F LT PL+T A G K GKT 
Sbjct: 181 FLYQYQNYGVRLQLGGNDQWGNMTTGTELIRRTLGSEAQAFCLTCPLITKADGKKFGKTE 240

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEA--K 299
           SG +WL++  T+PY F+Q+W N+ D D   + K  T L    I+ + +   ++      +
Sbjct: 241 SGNVWLDRNRTTPYAFYQFWLNVTDDDAERYIKIFTDLDQDTINALVEEHKQDPGRRTLQ 300

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDE 345
           + +A E+TTMVH +E+ + A  A+   F  +                 + +P  +I K +
Sbjct: 301 RRLAEEVTTMVHSKEDLDMAIAASNILFGKATKDSLAQLDEATLNDVFKDVPHYTIDKSQ 360

Query: 346 VSRGMGLLTLIVKAGFA--TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
           +  G   + L  + G     S +E R+ +K   + +N   ++     +  +D      + 
Sbjct: 361 L--GGTAVDLFNQEGMDIFPSKSEMRKLVKGGGVSLNKEKLTAFDQAVTAEDLIDGKYLL 418

Query: 404 LSFGKKNHII 413
           +  GKKN+ +
Sbjct: 419 VQRGKKNYYL 428


>gi|256372390|ref|YP_003110214.1| tyrosyl-tRNA synthetase [Acidimicrobium ferrooxidans DSM 10331]
 gi|256008974|gb|ACU54541.1| tyrosyl-tRNA synthetase [Acidimicrobium ferrooxidans DSM 10331]
          Length = 411

 Score =  243 bits (620), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 151/410 (36%), Positives = 219/410 (53%), Gaps = 14/410 (3%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG +   S P  L+ L   G    YIG+D TA SLH G+L  ++L   L   GH+ I
Sbjct: 7   LRWRGAVQDASAP--LEQLLDAGPRVFYIGFDPTADSLHVGNLLGIVLARRLIDAGHRAI 64

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML-NNET 130
            + GG T +IGDPS R   R ++    ++ N  +I G     +  G     A+ L +N T
Sbjct: 65  LVAGGATGMIGDPSGRSSERVLLDPATLRHNTARIAGQLQRLL--GDVVPGAVTLEDNRT 122

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           WL  +  I  LR+IG    V+ ML+ ES+R+RL  E  LSF EF+YMILQA DFVEL + 
Sbjct: 123 WLEPLTLIGFLRDIGKHVPVSAMLARESIRTRLGGE-GLSFTEFSYMILQAVDFVELHRR 181

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKE 250
           Y C LQ+GGSDQWGNI  GIDL  RL   ++  LT PL+T A GTK GK++ G +WL+++
Sbjct: 182 YGCTLQLGGSDQWGNIAAGIDLVRRLDGHEVHGLTWPLVTKADGTKFGKSMGGNVWLDED 241

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEITT 308
            TSPY  +Q++   +D  V+ +    T L   EI   R A         A + +A E+  
Sbjct: 242 RTSPYELYQFFVRAEDQKVMEYVALYTFLSFDEIAALRTAHEDDPSRRIAHRRLAWEVVR 301

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
            VHG   A++AA AA   F+        P +++ +     G+ ++ L + AG A S +EA
Sbjct: 302 FVHGEAAADQAAEAARALFEGGRAEAGAPVVTLERAAFGDGIDVIDLALAAGLARSRSEA 361

Query: 369 RRHLKSNAIKINN--SIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           RR +    + ++   ++      Q  L D    G++ L  GK++ ++  L
Sbjct: 362 RRLIAQGGLYVDGRRALEGQRVSQADLTD----GHLTLRRGKRDWVVVRL 407


>gi|297198738|ref|ZP_06916135.1| tyrosyl-tRNA synthetase [Streptomyces sviceus ATCC 29083]
 gi|197715380|gb|EDY59414.1| tyrosyl-tRNA synthetase [Streptomyces sviceus ATCC 29083]
          Length = 422

 Score =  243 bits (619), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 141/415 (33%), Positives = 229/415 (55%), Gaps = 13/415 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +D +  L  RG     ++   L    + G VT Y G+D TA+SLH GHL Q++ +  LQ+
Sbjct: 2   TDIVDELKWRGLWALSTDEDALRKALADGPVTFYCGFDPTAASLHVGHLVQVLTMRRLQQ 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN-IEKIKGIFSSFIKYGTGKTDAL 124
            G +P++L+GG T  IGDP  R  + R +   E   N + +++     F+ +  G+  A+
Sbjct: 62  AGLRPLALVGGATGQIGDP--RPTAERTLNDPETVANWVTRLRAQIEPFLSF-EGENAAV 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M+NN  W   +  I+ LR+IG  F VN+ML+ +SV  RL+ ++ +S+ EF+Y +LQ  DF
Sbjct: 119 MVNNLDWTAGMSAIEFLRDIGKHFRVNKMLTKDSVARRLESQEGISYTEFSYQLLQGMDF 178

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT-PKLFALTSPLLTTASGTKMGKTLSG 243
           +EL + Y C LQ GGSDQWGN+  G+DL  RL+    +  L +PL+  A GTK GKT  G
Sbjct: 179 LELYRRYGCTLQQGGSDQWGNLTAGLDLIHRLEPDASVHCLATPLMVKADGTKFGKTEGG 238

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT--TLPMSEIDRMAKLQGKEINEAKKI 301
           A+WL+ EMT+PY F+Q+W N+DD D+ ++ + L+  +    E       +  +   A++ 
Sbjct: 239 AVWLDPEMTTPYAFYQFWLNVDDRDISTYMRILSFRSREELEELEKQTEERPQARAAQRA 298

Query: 302 IATEITTMVHGREEAEKAATAAMECF---DMSIHSQHMPTISISKD---EVSRGMGLLTL 355
           +A E+TT+VHG ++      A+   F   +++   +   T ++S+    +V+    ++ L
Sbjct: 299 LAEELTTLVHGADQTAAVIAASRALFGQGELAELDERTLTAALSEVPHIQVAELGAVVDL 358

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
             + G   S + ARR +K     +NN  ++ E      +D      + L  GKKN
Sbjct: 359 FAEVGLVASKSAARRTVKEGGAYVNNVKVAAEDAVPAKEDLLHGRWLVLRRGKKN 413


>gi|58336534|ref|YP_193119.1| Tyr-tRNA synthetase [Lactobacillus acidophilus NCFM]
 gi|227903085|ref|ZP_04020890.1| Tyr-tRNA synthetase [Lactobacillus acidophilus ATCC 4796]
 gi|75358125|sp|Q5FMI6|SYY_LACAC RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|58253851|gb|AAV42088.1| tyr-tRNA synthetase [Lactobacillus acidophilus NCFM]
 gi|227869164|gb|EEJ76585.1| Tyr-tRNA synthetase [Lactobacillus acidophilus ATCC 4796]
          Length = 420

 Score =  242 bits (618), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 148/387 (38%), Positives = 205/387 (52%), Gaps = 17/387 (4%)

Query: 5   KSDFLSILSERGFIHQISNPREL-DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           K D L  L  RG I+Q ++   L   L     +  Y G D T  SLH GHL   M+L   
Sbjct: 3   KFDILEDLKWRGAINQETDEEGLRKYLAEHDDLALYCGTDPTGDSLHIGHLIPFMILKRF 62

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q  G+ P+ L+GGGT  IGDPS R   R +  +++++ N E +    ++ +K   G  + 
Sbjct: 63  QMAGYHPVILIGGGTGAIGDPSGRTTERVLQTAEQVKHNEESL----TNQMKKLFGTENF 118

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            + NN  WL  I  ID LR+ G +F VN M++ + V SRL  E  +SF EF Y ILQA D
Sbjct: 119 EIRNNAEWLGKINLIDFLRDYGKYFQVNNMINKDVVASRL--ENGISFTEFTYQILQAID 176

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK--LFALTSPLLTTASGTKMGKTL 241
           F  L K+   +LQ+GG DQWGNI  GIDL  +L+      F LT PL+  A GTK GK+ 
Sbjct: 177 FYHLNKDDGVQLQIGGGDQWGNITAGIDLIHKLEGSDRPAFGLTIPLMLKADGTKFGKSA 236

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAK 299
            GA+WL+ E TSPY F+Q+W N DD DVV + K  T L   EI+ +A+   KE     A+
Sbjct: 237 GGAVWLDPEKTSPYEFYQFWINQDDRDVVKYLKYFTFLSHEEIEDLAEKTEKEPWKRAAQ 296

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI------SISKDEVSRGMGLL 353
           K +A E+T  VHG E  ++A       F   I +  +  I      + S +  S    ++
Sbjct: 297 KKLAEEVTKFVHGEEGLKEAQMITDALFSGDIKNLSVTQIEQGLKNAPSAEAGSEKKNIV 356

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKIN 380
             +V      S  +AR  +K+ AI +N
Sbjct: 357 DFLVDTKIEPSKRQAREDVKNGAIYVN 383


>gi|154488639|ref|ZP_02029488.1| hypothetical protein BIFADO_01946 [Bifidobacterium adolescentis
           L2-32]
 gi|154082776|gb|EDN81821.1| hypothetical protein BIFADO_01946 [Bifidobacterium adolescentis
           L2-32]
          Length = 435

 Score =  242 bits (618), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 137/409 (33%), Positives = 221/409 (54%), Gaps = 20/409 (4%)

Query: 5   KSDFLSILSE---RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
           ++ F S+L E   RG I Q ++   L    +   ++ Y G+D TA+SLH G+L QL+ + 
Sbjct: 9   EAGFESVLDELEWRGLISQSTDRDRLAEALNGDPISYYCGFDPTAASLHIGNLVQLINMR 68

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN-IEKIKGIFSSFIKYGTGK 120
            LQ  GH PI+L+GG T +IGDP  R    R +  +++     E++K      ++   G 
Sbjct: 69  HLQAAGHHPIALVGGATGLIGDP--RQSGERTLNPKDVVAGWAERLKAQIGGILEV-EGS 125

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
                ++N  W  S+  ID LR++G  F +  ML+ ++V  RL  E  +SF EF+Y +LQ
Sbjct: 126 NPVRFVSNYDWTASMNVIDFLRDVGKNFRLGTMLAKDTVARRLNSEDGISFTEFSYQVLQ 185

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
             DF+ L   Y C L++GGSDQWGN+  G+DL  +++   +   TSP++T A G K GK+
Sbjct: 186 GNDFLHLFDEYHCVLELGGSDQWGNLTSGLDLIHKVRGVDVNVFTSPIITDAQGKKFGKS 245

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEA 298
              A+WL+  M SPY F+Q+W N  D+++ +  K  T LP +EI+R+ +         EA
Sbjct: 246 EGNAVWLDGTMLSPYKFYQFWFNRPDSEMENLLKVFTFLPKAEIERLVEESKTNPGAREA 305

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECF---------DMSIHSQHMPTISISKDEVSRG 349
           ++ +A E+T++VHG E   +A  AA   F         D S     +  + I  +     
Sbjct: 306 QRTLAWEVTSLVHGEEATRQAIEAAGALFGRGGDLAGVDESTLEAALDGVKIDGEFAKAA 365

Query: 350 MG--LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
           +G  +    +KAG   S +EAR+ +K+  + +NN+ + +E+  +   DF
Sbjct: 366 VGDRVAEAGMKAGLFKSISEARKTIKAGGVYLNNARVEDEEQVLNENDF 414


>gi|260910551|ref|ZP_05917218.1| tyrosine-tRNA ligase [Prevotella sp. oral taxon 472 str. F0295]
 gi|260635322|gb|EEX53345.1| tyrosine-tRNA ligase [Prevotella sp. oral taxon 472 str. F0295]
          Length = 364

 Score =  242 bits (618), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 133/326 (40%), Positives = 189/326 (57%), Gaps = 9/326 (2%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           K +F+  L  RG + QI    E   L  +  VTAY+G D TA SLH GHL  +M+L  LQ
Sbjct: 2   KKNFVEELRWRGMLAQIMPGTE--ELLQKETVTAYLGTDPTADSLHIGHLAGIMMLRHLQ 59

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY-GTGKTDA 123
             GHKPI L+GG T +IGDPS +   R ++ +Q +  N E IK   + F+ +   G   A
Sbjct: 60  MCGHKPIILVGGATGMIGDPSGKSMERNLLDAQTLYHNQECIKAQVAKFLDFEAKGDNAA 119

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQA 181
            M+NN  W+    ++D  R +G   +VN M++ +SV+ RL  +    LSF EF Y +LQ 
Sbjct: 120 EMVNNYDWMKDFTFLDFARTVGKHITVNYMMAKDSVKKRLNGDARDGLSFTEFTYQLLQG 179

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL--KTPKLFALTSPLLTTASGTKMGK 239
           YDF+ L +   C+LQ+GG+DQWGN+  G +L  R      + +ALT PL+T A GTK GK
Sbjct: 180 YDFLHLYETKGCKLQLGGNDQWGNMTTGAELIRRTLGVETEAYALTCPLITKADGTKFGK 239

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEA- 298
           T SG IWL+ + TSPY F+Q+W N+ DAD   + K  T+L    ID +   Q ++     
Sbjct: 240 TESGNIWLDAKRTSPYMFYQFWLNVSDADAERYIKIFTSLDKETIDALVAEQNEDPGRRP 299

Query: 299 -KKIIATEITTMVHGREEAEKAATAA 323
            +K +A E+T MVH +   ++A  A+
Sbjct: 300 LQKRLAEEVTVMVHSQAALDQAMEAS 325


>gi|119025932|ref|YP_909777.1| tyrosyl-tRNA synthetase [Bifidobacterium adolescentis ATCC 15703]
 gi|189083644|sp|A1A1W2|SYY_BIFAA RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|118765516|dbj|BAF39695.1| tyrosyl-tRNA synthetase [Bifidobacterium adolescentis ATCC 15703]
          Length = 435

 Score =  242 bits (618), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 142/415 (34%), Positives = 229/415 (55%), Gaps = 32/415 (7%)

Query: 5   KSDFLSILSE---RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
           ++ F S+L E   RG I Q ++   L    +   +T Y G+D TA+SLH G+L QL+ + 
Sbjct: 9   EAGFDSVLDELEWRGLISQSTDRDRLAEALNGEPITYYCGFDPTAASLHIGNLVQLINMR 68

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI----QENIEK-IKGIFSSFIKY 116
            LQ  GH PI+L+GG T +IGDP  R    R +  +++     + ++K I GI  +    
Sbjct: 69  HLQAAGHHPIALVGGATGLIGDP--RQSGERTLNPKDVVAGWADRLKKQIGGILET---- 122

Query: 117 GTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNY 176
             G      ++N  W  S+  ID LR++G  F +  ML+ ++V  RL  E+ +SF EF+Y
Sbjct: 123 -EGSNPVRFVSNYDWTASMNVIDFLRDVGKNFRMGTMLAKDTVARRLNSEEGISFTEFSY 181

Query: 177 MILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTK 236
            +LQ  DF+ L   Y C L++GGSDQWGN+  G+DL  +++   +   TSP++T A G K
Sbjct: 182 QVLQGNDFLHLFDEYHCVLEIGGSDQWGNLTSGLDLIHKVRGVDVNVFTSPIITDAQGKK 241

Query: 237 MGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN 296
            GK+   A+WL+  M SPY F+Q+W N  D+++ +  K  T LP +EI+R+  ++  + N
Sbjct: 242 FGKSEGNAVWLDGTMLSPYKFYQFWFNRPDSEMENLLKAFTFLPKAEIERL--IEESKTN 299

Query: 297 ----EAKKIIATEITTMVHGREEAEKAATAAMECF---------DMSIHSQHMPTISISK 343
               EA++ +A E+T+ VHG E   +A  AA   F         D S     +  + +  
Sbjct: 300 PGAREAQRTLAWEVTSFVHGEEATRQAIEAAGALFGRGGDLADIDESTLEAAIDGMKVDG 359

Query: 344 D--EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
           +  +V+ G  +    +KAG   S +EAR+ +KS  + +NN+ + +E+  ++  DF
Sbjct: 360 EFAKVAAGDRVAEAGMKAGLFKSISEARKTIKSGGVYLNNTRVEDEEQTLQEGDF 414


>gi|323465746|gb|ADX69433.1| Tyrosine-tRNA ligase [Lactobacillus helveticus H10]
          Length = 420

 Score =  242 bits (617), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 149/387 (38%), Positives = 204/387 (52%), Gaps = 17/387 (4%)

Query: 5   KSDFLSILSERGFIHQISNPREL-DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           K D L  L  RG I+Q ++   L   L     +  Y G D T  SLH GHL   M+L   
Sbjct: 3   KFDILEDLKWRGAINQETDEEGLRKYLAEHDDLALYCGTDPTGDSLHIGHLIPFMILKRF 62

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q  G+ P+ L+GGGT  IGDPS R   R +  + +++ N E      ++ +K   G  + 
Sbjct: 63  QMAGYHPVILIGGGTGAIGDPSGRKTERTLQTADQVKHNEE----CLTNQMKKLFGTENF 118

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            + NN  WL  +  ID LR+ G FF VN M++ + V SRL  E  +SF EF Y ILQA D
Sbjct: 119 EIRNNAEWLGKLNLIDFLRDYGKFFQVNNMINKDVVASRL--ENGISFTEFTYQILQAID 176

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK--LFALTSPLLTTASGTKMGKTL 241
           F  L K+   +LQ+GGSDQWGNI  GIDL  +L+      F LT PL+  A GTK GK+ 
Sbjct: 177 FYHLNKDDGVQLQIGGSDQWGNITAGIDLIHKLEGADRPAFGLTIPLMLKADGTKFGKSA 236

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAK 299
            GA+WL+ E TSPY F+Q+W N DD DVV + K  T L   EI+ +A+   KE     A+
Sbjct: 237 GGAVWLDPEKTSPYEFYQFWINQDDRDVVKYLKYFTFLSREEIEDLAEKTEKEPWKRAAQ 296

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI------SISKDEVSRGMGLL 353
           K +A E+T  VHG    ++A       F  +I +  +  I      + S +  S    L+
Sbjct: 297 KRLAEEVTKFVHGEAGLKEAQMITDALFSGNIKNLSVTQIEQGLKNAPSAEAGSEKKNLV 356

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKIN 380
             +V      S  +AR  +K+ AI +N
Sbjct: 357 DFLVDTKIEPSKRQAREDIKNGAIYVN 383


>gi|256847600|ref|ZP_05553045.1| tyrosyl-tRNA synthetase [Lactobacillus coleohominis 101-4-CHN]
 gi|256715289|gb|EEU30265.1| tyrosyl-tRNA synthetase [Lactobacillus coleohominis 101-4-CHN]
          Length = 416

 Score =  242 bits (617), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 149/425 (35%), Positives = 229/425 (53%), Gaps = 25/425 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D L  L  RG I+Q ++   L  L +   ++ Y G D T  SLH GHL   ++L   Q  
Sbjct: 2   DILEDLKWRGAINQCTDLNGLRELLNSKKISLYCGTDPTGDSLHVGHLIPFIMLKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P  L+GGGT  IGDPS R   R++  + ++Q N E    +    IK   G  +  ++
Sbjct: 62  GHHPYILIGGGTGFIGDPSGRKTERQLQTATQVQHNKE---ALTRQMIKL-FGTENFKIV 117

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           +N  WL  I  +D LR+ G  F+VN MLS E+V SRLK    +SF EF+Y ILQ+ DF+ 
Sbjct: 118 DNYEWLSKISLLDFLRDYGKSFNVNTMLSKEAVASRLK--NGISFTEFSYQILQSVDFLY 175

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASGTKMGKTLSGAI 245
           L      +LQ+GG+DQWGN+  G+ L    K   K+F LT PL+  A GTK GK+  GA+
Sbjct: 176 LNNVDHIQLQIGGADQWGNLTNGVYLIHSKKPNEKVFGLTIPLMLKADGTKFGKSAGGAV 235

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKII 302
           WL+   TSP+ F+Q+W N DD DVV + K  T L   EID +A   KL+ ++  EA++ +
Sbjct: 236 WLDANKTSPFEFYQFWFNQDDLDVVKYLKYFTFLTHQEIDDLAEKVKLEPQK-REAQRRL 294

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGL 352
           A E+T  VHG +  ++A   +   F+ +I            + +P++ I+ D V+    +
Sbjct: 295 AEEVTKFVHGEKTMKQAERISNLLFNGNIQDLSVSELKQAFKKVPSVEINLDSVN----V 350

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           +  +V+    +S  +AR  + + AI IN   +++E   +  ++      +    GK+N+ 
Sbjct: 351 IDWLVQTEIESSKRQAREDVNNGAIMINGQKVNDENYIVDPKNHFEGKYVVARKGKRNYF 410

Query: 413 ICHLC 417
           +  + 
Sbjct: 411 LAKVV 415


>gi|227894187|ref|ZP_04011992.1| tyrosyl-tRNA synthetase [Lactobacillus ultunensis DSM 16047]
 gi|227863992|gb|EEJ71413.1| tyrosyl-tRNA synthetase [Lactobacillus ultunensis DSM 16047]
          Length = 420

 Score =  242 bits (617), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 150/387 (38%), Positives = 204/387 (52%), Gaps = 17/387 (4%)

Query: 5   KSDFLSILSERGFIHQISNPREL-DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           K D L  L  RG I+Q ++   L   L     +  Y G D T  SLH GHL   M+L   
Sbjct: 3   KFDILEDLKWRGAINQETDEEGLRKYLAEHDDLALYCGTDPTGDSLHIGHLIPFMILKRF 62

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q  G+ P+ L+GGGT  IGDPS R   R +  + +++ N E      ++ +K   G  + 
Sbjct: 63  QMAGYHPVILIGGGTGAIGDPSGRKTERTLQTAAQVKHNEE----CLTNQMKKLFGTENF 118

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            + NN  WL  I  ID LR+ G FF VN M++ + V SRL  E  +SF EF Y ILQA D
Sbjct: 119 EIRNNAEWLGKINLIDFLRDYGKFFQVNNMINKDVVASRL--ENGISFTEFTYQILQAID 176

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK--LFALTSPLLTTASGTKMGKTL 241
           F  L K+   +LQ+GGSDQWGNI  GIDL  +L+      F LT PL+  A GTK GK+ 
Sbjct: 177 FYHLNKDDGVQLQIGGSDQWGNITAGIDLIHKLEGADRPAFGLTIPLMLKADGTKFGKSA 236

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAK 299
            GA+WL+ E TSPY F+Q+W N DD DVV + K  T L   EI+ +A+   KE     A+
Sbjct: 237 GGAVWLDPEKTSPYEFYQFWINQDDRDVVKYLKYFTFLSREEIEDLAEKTEKEPWKRAAQ 296

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI------SISKDEVSRGMGLL 353
           K +A E+T  VHG    ++A       F  +I +  +  I      + S +  S    L+
Sbjct: 297 KKLAEEVTKFVHGEAGLKEAQMITDALFSGNIKNLSVIQIEQGLKNAPSAEAGSERKNLV 356

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKIN 380
             +V      S  +AR  +K+ AI +N
Sbjct: 357 DFLVDTKIEPSKRQAREDIKNGAIYVN 383


>gi|317496029|ref|ZP_07954391.1| tyrosyl-tRNA synthetase [Gemella moribillum M424]
 gi|316913933|gb|EFV35417.1| tyrosyl-tRNA synthetase [Gemella moribillum M424]
          Length = 417

 Score =  242 bits (617), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 144/428 (33%), Positives = 230/428 (53%), Gaps = 32/428 (7%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ L  L  R  ++Q ++   +  L     V+ Y G D T  SLH GHL   + L    K
Sbjct: 2   SNLLEELKYRDLVYQQTDEEGIKKLLETESVSIYCGTDPTGDSLHVGHLLPFLTLKRFAK 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP+ L+GGGT IIGDPS R E R++   + I EN +K++    +  +   G  +   
Sbjct: 62  YGHKPVVLVGGGTGIIGDPSGRSEERQLQSLETIAENAKKLENQLRNIFR---GDENIEF 118

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  WL  +  I+ LR+ G   +VN ML+ +SV SRL  E  LSF EF+Y +LQ  D+ 
Sbjct: 119 VNNGDWLGKMSMIEFLRDFGKLINVNYMLAKDSVSSRL--ENGLSFTEFSYTLLQGIDYA 176

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLLTTASGTKMGKTLSGA 244
            L +++  ++Q+GGSDQWGNI  G+++  +L+   + +  T PL+  + GTK GK+  GA
Sbjct: 177 YLNEHHGVKMQLGGSDQWGNITTGLEIMRKLRGDVEAYGFTIPLMLKSDGTKFGKSTGGA 236

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE--INEAKKII 302
           +WL+ E T+PY F+Q+W N  D D +S  K+ T L   EI+++ +   KE  +  A+K +
Sbjct: 237 VWLDPEKTTPYEFYQFWFNTADNDTISAIKKFTFLEKEEIEKLEESLAKEPHLRLAQKAL 296

Query: 303 ATEITTMVHGREEAEKAATAAMECF----------DMSIHSQHMPTISISKDEVSRGMGL 352
           A E+  +VHG    E A       F          ++ +  + MP   + KD+++    +
Sbjct: 297 AEELVKIVHGEAALESALNITKALFSGNIKELTLDELKVAVKGMPKAQLPKDDIN----I 352

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF-----G 407
           +  +V++G  TS  +AR  + + AI IN   +++    +     DS+  ++ SF     G
Sbjct: 353 VDFLVESGVVTSKRQAREDVNNGAISINGDKVTDLAFTV-----DSSSRLEDSFTVVRRG 407

Query: 408 KKNHIICH 415
           KKN+ +  
Sbjct: 408 KKNYKLVE 415


>gi|317504618|ref|ZP_07962586.1| tyrosine--tRNA ligase [Prevotella salivae DSM 15606]
 gi|315664267|gb|EFV03966.1| tyrosine--tRNA ligase [Prevotella salivae DSM 15606]
          Length = 433

 Score =  242 bits (617), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 129/324 (39%), Positives = 193/324 (59%), Gaps = 9/324 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG + QI  P   + L +  +V+AY+G D TA SLH GHL  +M+L  LQ+ 
Sbjct: 4   NFVEELKWRGMLAQIM-PGTEEYLQTH-MVSAYLGTDPTADSLHIGHLCGIMMLRHLQRC 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY-GTGKTDALM 125
           GHKP  L+GG T +IGDPS + + R ++ S+ +  N E IK   + F+ + G+    A +
Sbjct: 62  GHKPYLLVGGATGMIGDPSGKSQERNLLDSETLYHNQEAIKKQVAKFLDFDGSEPNKAEL 121

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQAYD 183
           +NN  W+    ++D  RE+G   +VN M++ +SV+ RL  E    LSF EF Y +LQ YD
Sbjct: 122 VNNYDWMKDFTFLDFAREVGKHITVNYMMAKDSVQKRLNGEARDGLSFTEFTYQLLQGYD 181

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERL--KTPKLFALTSPLLTTASGTKMGKTL 241
           F+   ++Y  RLQ+GG+DQWGN+  G +L  R      + F LT PL+T A G K GKT 
Sbjct: 182 FLYQYQHYGVRLQLGGNDQWGNMTTGTELIHRTLGNDAEAFCLTCPLITKADGKKFGKTE 241

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEA--K 299
           SG +WL+++ T+PY F+Q+W N+ D+D   + K  T L   EID +     ++      +
Sbjct: 242 SGNVWLDRQRTTPYAFYQFWLNVSDSDAERYIKIFTDLDKEEIDGLVAEHQQDPGRRILQ 301

Query: 300 KIIATEITTMVHGREEAEKAATAA 323
           K +A E+TTMVH +E+ + A  A+
Sbjct: 302 KRLAEEVTTMVHSKEDLDMAIAAS 325


>gi|227509207|ref|ZP_03939256.1| tyrosine--tRNA ligase [Lactobacillus brevis subsp. gravesensis ATCC
           27305]
 gi|227191353|gb|EEI71420.1| tyrosine--tRNA ligase [Lactobacillus brevis subsp. gravesensis ATCC
           27305]
          Length = 418

 Score =  242 bits (617), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 150/433 (34%), Positives = 227/433 (52%), Gaps = 40/433 (9%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + L  L  RG I+Q ++   L  L ++  V  Y+G D T  S+H GHL   M+L   Q  
Sbjct: 2   NILDDLKWRGAINQETDHDGLYDLVNKKSVGLYVGIDPTGDSMHIGHLIPFMILKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN-------IEKIKGIFSSFIKYGTG 119
           GH P+ L+GGGT  IGDPS +   R +    +++ N       +EK+ G   SF      
Sbjct: 62  GHHPVILIGGGTGSIGDPSGKKSERVLQTMDQVRHNQEALTRQMEKLFGQDGSF------ 115

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
                ++NN  WL  +  +D LR+ G  F++N M+  E + SRL  E  +SF EF Y IL
Sbjct: 116 ----EIVNNYDWLSKMSLLDFLRDYGKLFNINTMIRKEIIASRL--EAGISFTEFTYQIL 169

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK--TPKLFALTSPLLTTASGTKM 237
           Q  DF+ L +  D ++Q+GG+DQWGNI  GIDL  +++    + + +T PLL  A GTK 
Sbjct: 170 QGVDFLHLFRYNDVQVQLGGADQWGNITSGIDLIHKVEGSDAQAYGMTIPLLLKADGTKF 229

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEI 295
           GK+  G +WL+ E T+PY F+Q+W N DD DVV + K  T L  +EID + K      E 
Sbjct: 230 GKSEGGNVWLDPEKTTPYEFYQFWLNQDDRDVVKYLKYFTFLDKTEIDDLEKKVQTHPEK 289

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDE 345
            EA++ +A E+T  VHG +  E A   +   F   +            ++MPT+++S   
Sbjct: 290 REAQRRLAQEVTKFVHGPKAVESAERISKALFSGEVADLTTTEIEQGFKNMPTVNVS--- 346

Query: 346 VSRGMGLLTLIVKA-GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD-FDSTGNIK 403
            S  + ++  +V A    +S  +AR  + + AI+IN + I +   +I   D FD    I 
Sbjct: 347 -SEPLNIVQWLVDATKIESSRRQAREDINNGAIRINGAKIQDTDFEINPSDKFDGKFVI- 404

Query: 404 LSFGKKNHIICHL 416
           +  GKK + +  +
Sbjct: 405 VRRGKKRYFLARV 417


>gi|218282313|ref|ZP_03488603.1| hypothetical protein EUBIFOR_01185 [Eubacterium biforme DSM 3989]
 gi|218216686|gb|EEC90224.1| hypothetical protein EUBIFOR_01185 [Eubacterium biforme DSM 3989]
          Length = 430

 Score =  242 bits (617), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 149/426 (34%), Positives = 231/426 (54%), Gaps = 25/426 (5%)

Query: 4   FKSDFLSILSE---RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           F+ D + +  E   RG +  +++  E++ + + G VT YIG D TA SLH GH + L++ 
Sbjct: 16  FREDKMELFEELKWRGLVDNVTS-EEVEDVINNGEVTFYIGTDPTADSLHIGHYSSLLMA 74

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             L+K GH PI L+GG T  IGDP    E R M+ S+ ++ N + +    S    +    
Sbjct: 75  KRLEKHGHHPIMLVGGATGFIGDPKATGE-RSMLTSEVLKSNYDALHAQISKLWGFD--- 130

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               M+NN  W   I  ID LR+ G  F+VN ML+ E+V+ RL  +  +S+ EF+YMILQ
Sbjct: 131 ----MVNNLDWTKDITIIDFLRDYGKLFNVNYMLNKETVKKRL--DSGISYTEFSYMILQ 184

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL--KTPKLFALTSPLLTTASGTKMG 238
           + DF+ L +   C +Q+GG DQWGNI  G++L  +      K + LT PL+T A GTK G
Sbjct: 185 SLDFLNLYQTRGCTMQIGGQDQWGNITSGLELIRKKCGADVKCYGLTMPLITKADGTKFG 244

Query: 239 KTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--- 295
           K+ +G +WL+ + TSPY  +Q+  N DD+ V+ + K+LT L   EID + ++  KE    
Sbjct: 245 KSETGTVWLDPKKTSPYELYQFLFNTDDSKVIEYLKKLTFLTKEEIDAL-EVSLKEDAGR 303

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECF-----DMSIHSQHMPTISISKDEVSRGM 350
            EA+K +A E+   +HG E  E A       F     D+    +     ++ K +   G 
Sbjct: 304 REAQKKLAEEVVRDLHGEEGLESALKITNALFRGQLNDLDEQQRLDAVKNMDKVDQEAGK 363

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            L+ ++V+A  A+S  EAR  +K N+I +N   +++E L I       +  + +  GKK 
Sbjct: 364 SLIDVLVEAKIASSRREAREWIKGNSISLNGVKVNDETLVIDSTQAYVSNYVIIRRGKKR 423

Query: 411 HIICHL 416
           +   +L
Sbjct: 424 YYCLNL 429


>gi|239917922|ref|YP_002957480.1| tyrosyl-tRNA synthetase [Micrococcus luteus NCTC 2665]
 gi|239839129|gb|ACS30926.1| tyrosyl-tRNA synthetase [Micrococcus luteus NCTC 2665]
          Length = 447

 Score =  242 bits (617), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 148/424 (34%), Positives = 226/424 (53%), Gaps = 19/424 (4%)

Query: 2   PAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
           P+F+ +    L  RG +H  ++   L+   +   V+ Y G+D TA SLH GHL QL+ L 
Sbjct: 19  PSFE-NVWQELRWRGLVHVSTDEAALEQALAGEPVSYYCGFDPTAPSLHLGHLVQLLTLR 77

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQE-IQENIEKIKGIFSSFIKYGTGK 120
            LQ  GH+P +L+GG T +IGDP  R  S R++ SQE +   +E ++     ++ +  G+
Sbjct: 78  RLQLAGHRPYALVGGATGLIGDP--RQTSERVLNSQETVAAWVESLRAQIEPYLSF-EGE 134

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
             A M+NN  W   +  +D LR+IG  F V  M+  E V  RL  ++ +S+ EF+Y +LQ
Sbjct: 135 NAATMVNNLDWTAGMSALDFLRDIGKNFRVGTMVKKEIVAKRLNSDEGISYTEFSYQVLQ 194

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
             DF+EL + +   LQ GGSDQWGN+  G +L  +++     AL +PL+T A GTK GK+
Sbjct: 195 GNDFLELHRRHGVTLQTGGSDQWGNLTAGTELIRKVEGTHAHALGTPLITNADGTKFGKS 254

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEA 298
              A+WL+ EM SPY F+Q+W N  DADVV   K  T L  +EI+  A+    E    EA
Sbjct: 255 EGNAVWLDAEMCSPYAFYQFWLNTADADVVDRLKVFTFLTRAEIEEYAQKVADEPFRREA 314

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECF---DMSIHS--------QHMPTISISKDEVS 347
           +K +A E+T + HG E   K   A+   F   D++             +P    ++ E  
Sbjct: 315 QKRLAWEVTALAHGEETTTKVIEASQAVFGGGDLTTVDPDTLTAVLAELPQADRTQWEGE 374

Query: 348 RG-MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G +  + L+V  G   S +EARR ++     +NN  +++        D  +  ++ +  
Sbjct: 375 PGTVTAVELLVSTGLVASRSEARRTVRDGGASVNNVRVTDADQVFTRDDAFAGRHLLVRR 434

Query: 407 GKKN 410
           GKKN
Sbjct: 435 GKKN 438


>gi|312869623|ref|ZP_07729773.1| tyrosine--tRNA ligase [Lactobacillus oris PB013-T2-3]
 gi|311094857|gb|EFQ53151.1| tyrosine--tRNA ligase [Lactobacillus oris PB013-T2-3]
          Length = 416

 Score =  241 bits (616), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 149/419 (35%), Positives = 227/419 (54%), Gaps = 24/419 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I+Q ++   L  L     +  Y G D T  SLH GHL   M+L   Q  GH P+
Sbjct: 7   LQWRGAINQTTDLDALKELTENDKIALYCGTDPTGDSLHIGHLIPFMILKRFQLAGHHPV 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            ++GGGT  IGDPS R   R +    ++  N E +    ++ +K   G  +  ++NN  W
Sbjct: 67  IIIGGGTGAIGDPSGRKSERTLQTMDQVHHNEEAL----TAQMKKLFGTENFTIVNNYDW 122

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L  I  +D LR+ G  F++N ML+ E V SRL  +  +SF EF Y ILQ+ DF+ L ++ 
Sbjct: 123 LSRISLLDFLRDYGKLFNINTMLNKEVVASRL--DAGISFTEFTYQILQSVDFLHLYRHN 180

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
           D +LQ+GGSDQWGNI  GIDL  +++ P  K++ LT PL+  A GTK GKT  GAIWL+ 
Sbjct: 181 DVQLQIGGSDQWGNITAGIDLIHKVEGPDAKVYGLTIPLMLKADGTKFGKTAGGAIWLDP 240

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIATEIT 307
           E TSPY F+Q+W N DD DV+ + K  T L   EID +A+   KE    EA++ +A E+T
Sbjct: 241 EKTSPYEFYQFWINQDDRDVIKYLKYFTFLSKEEIDDLAEKVEKEPWKREAQRRLAEEVT 300

Query: 308 TMVHGREEAEKAATAAMECF-----DMSIHS-----QHMPTISISKDEVSRGMGLLTLIV 357
             VHG +  E+A   +   F     D+S        ++MP++ +      +   ++  + 
Sbjct: 301 KFVHGEKAVEEAQRISKALFSGDVADLSAAEIEQGFKNMPSVDVD----DKKENIVVWLT 356

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             G   S  +AR+ + + AI+IN   +++ + ++          + +  GKK++ +  +
Sbjct: 357 DNGMEPSRRQARQDVSNGAIRINGEKVTDVEAEVDPSTHFDGKFVIVRRGKKHYFLARV 415


>gi|170093041|ref|XP_001877742.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164647601|gb|EDR11845.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 474

 Score =  241 bits (616), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 142/423 (33%), Positives = 223/423 (52%), Gaps = 38/423 (8%)

Query: 7   DFLSILSERGFIHQISNPRELDI--LCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           + L  L  RGFIH ++    L +    +QGV   Y G D TASSLH GHL  LM L    
Sbjct: 30  ELLDDLVRRGFIHDVTRRDHLRVSLQTTQGV---YAGIDPTASSLHVGHLIPLMCLLHFH 86

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIE----KIKGIFSSFIKYGTGK 120
             GH+ I L+GG T  +GDPS R   R++   ++++ N++     ++  FS  + Y   +
Sbjct: 87  LRGHRVIPLIGGATGRVGDPSGRSVERQLADVEQVENNVQCLQKSVRSFFSRAVAYAETR 146

Query: 121 TDAL--------MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFL 172
             A+        + +N  W   +  +D L+ +G    VN ML+ ESVR+RL  +Q LSF 
Sbjct: 147 HGAVQEERFLPVVESNLKWHSQLTMLDFLQSVGIHARVNTMLNRESVRARLSSQQGLSFT 206

Query: 173 EFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL----KTPK-----LFA 223
           EF Y +LQAYDF  L K+++C +Q+GGSDQWGNI+ G++L  RL      P       + 
Sbjct: 207 EFTYQLLQAYDFYHLYKHHNCSIQVGGSDQWGNILAGLELIGRLDDGPSAPATSHTGAYG 266

Query: 224 LTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSE 283
           +T+PLLTT+SG K GK+   AIWLN + TS ++F+QY+  + DADV  +    T +   +
Sbjct: 267 ITTPLLTTSSGEKFGKSAGNAIWLNPDQTSVFDFYQYFLKVSDADVERYLNLFTLMTSQD 326

Query: 284 IDRM--AKLQGKEINEAKKIIATEITTMVHGREEAEKAAT----------AAMECFDMSI 331
           I  +    +   E   A++ +A E+T MVH  E    A T          A ++  D+ +
Sbjct: 327 IQNVMGVHVDHPEKRVAQRRLAAEVTEMVHTPEGLVNAETLTGLFFESDYAGLKVKDILL 386

Query: 332 HSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
             +  P + +  +E  R   +  L  + G A+S + AR  + S  + +N+ ++ + +  I
Sbjct: 387 ALKDDPRLVLVSEEEMRATPIYKLASRHGLASSNSAARALVASRGLYVNDIVVCDIQTHI 446

Query: 392 KLQ 394
            ++
Sbjct: 447 PIE 449


>gi|161506790|ref|YP_001576744.1| tyrosyl-tRNA synthetase [Lactobacillus helveticus DPC 4571]
 gi|189083657|sp|A8YX30|SYY_LACH4 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|160347779|gb|ABX26453.1| Tyrosyl-tRNA synthetase [Lactobacillus helveticus DPC 4571]
          Length = 420

 Score =  241 bits (616), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 149/387 (38%), Positives = 203/387 (52%), Gaps = 17/387 (4%)

Query: 5   KSDFLSILSERGFIHQISNPREL-DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           K D L  L  RG I+Q ++   L   L     +  Y G D T  SLH GHL   M+L   
Sbjct: 3   KFDILEDLKWRGAINQETDEEGLRKYLAEHDDLALYCGTDPTGDSLHIGHLIPFMILKRF 62

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q  G+ P+ L+GGGT  IGDPS R   R +  + +++ N E      ++ +K   G  + 
Sbjct: 63  QMAGYHPVILIGGGTGAIGDPSGRKTERTLQTADQVKHNEE----CLTNQMKKLFGTENF 118

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            + NN  WL  +  ID LR+ G FF VN M++ E V SRL  E  +SF EF Y ILQA D
Sbjct: 119 EIRNNAEWLGKLNLIDFLRDYGKFFQVNNMINKEVVASRL--ENGISFTEFTYQILQAID 176

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK--LFALTSPLLTTASGTKMGKTL 241
           F  L K+   +LQ+GGSDQWGNI  GIDL  +L+      F LT PL+  A GTK GK+ 
Sbjct: 177 FYHLNKDDGVQLQIGGSDQWGNITAGIDLIHKLEGADRPAFGLTIPLMLKADGTKFGKSA 236

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAK 299
            GA+WL+ E TSPY F+Q+W N DD DVV + K    L   EI+ +A+   KE     A+
Sbjct: 237 GGAVWLDPEKTSPYEFYQFWINQDDRDVVKYLKYFAFLSREEIEDLAEKTEKEPWKRAAQ 296

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI------SISKDEVSRGMGLL 353
           K +A E+T  VHG    ++A       F  +I +  +  I      + S +  S    L+
Sbjct: 297 KRLAEEVTKFVHGEAGLKEAQMITDALFSGNIKNLSVTQIEQGLKNAPSAEAGSEKKNLV 356

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKIN 380
             +V      S  +AR  +K+ AI +N
Sbjct: 357 DFLVDTKIEPSKRQAREDIKNGAIYVN 383


>gi|227512091|ref|ZP_03942140.1| tyrosine--tRNA ligase [Lactobacillus buchneri ATCC 11577]
 gi|227525078|ref|ZP_03955127.1| tyrosine--tRNA ligase [Lactobacillus hilgardii ATCC 8290]
 gi|227084743|gb|EEI20055.1| tyrosine--tRNA ligase [Lactobacillus buchneri ATCC 11577]
 gi|227087790|gb|EEI23102.1| tyrosine--tRNA ligase [Lactobacillus hilgardii ATCC 8290]
          Length = 418

 Score =  241 bits (616), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 150/433 (34%), Positives = 226/433 (52%), Gaps = 40/433 (9%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + L  L  RG I+Q ++   L  L ++  V  Y+G D T  S+H GHL   M+L   Q  
Sbjct: 2   NILDDLKWRGAINQETDHDGLYDLVNKKSVGLYVGIDPTGDSMHIGHLIPFMILKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN-------IEKIKGIFSSFIKYGTG 119
           GH P+ L+GGGT  IGDPS +   R +    ++  N       +EK+ G   SF      
Sbjct: 62  GHHPVILIGGGTGSIGDPSGKKSERVLQTMDQVHHNQEALTHQMEKLFGQDGSF------ 115

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
                ++NN  WL  +  +D LR+ G  F++N M+  E + SRL  E  +SF EF Y IL
Sbjct: 116 ----EIVNNYDWLSKMSLLDFLRDYGKLFNINTMIRKEIIASRL--EAGISFTEFTYQIL 169

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK--TPKLFALTSPLLTTASGTKM 237
           Q  DF+ L +  D ++Q+GG+DQWGNI  GIDL  +++    + + +T PLL  A GTK 
Sbjct: 170 QGVDFLHLFRYNDVQVQLGGADQWGNITSGIDLIHKVEGSDAQAYGMTIPLLLKADGTKF 229

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEI 295
           GK+  G +WL+ E T+PY F+Q+W N DD DVV + K  T L  +EID + K      E 
Sbjct: 230 GKSEGGNVWLDPEKTTPYEFYQFWLNQDDRDVVKYLKYFTFLDKTEIDDLEKKVQTHPEK 289

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDE 345
            EA++ +A E+T  VHG +  E A   +   F   +            ++MPT+++S   
Sbjct: 290 REAQRRLAQEVTKFVHGPKAVESAERISKALFSGEVADLTTTEIEQGFKNMPTVNVS--- 346

Query: 346 VSRGMGLLTLIVKA-GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD-FDSTGNIK 403
            S  + ++  +V A    +S  +AR  + + AI+IN + I +   +I   D FD    I 
Sbjct: 347 -SEPLNIVQWLVDATKIESSRRQAREDINNGAIRINGAKIQDTDFEINPSDKFDGKFVI- 404

Query: 404 LSFGKKNHIICHL 416
           +  GKK + +  +
Sbjct: 405 VRRGKKRYFLARV 417


>gi|289704496|ref|ZP_06500931.1| tyrosine--tRNA ligase [Micrococcus luteus SK58]
 gi|289558754|gb|EFD52010.1| tyrosine--tRNA ligase [Micrococcus luteus SK58]
          Length = 447

 Score =  241 bits (616), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 147/424 (34%), Positives = 226/424 (53%), Gaps = 19/424 (4%)

Query: 2   PAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
           P+F+ +    L  RG +H  ++   L+   +   V+ Y G+D TA SLH GHL QL+ L 
Sbjct: 19  PSFE-NVWQELRWRGLVHVSTDEAALEQALAGEPVSYYCGFDPTAPSLHLGHLVQLLTLR 77

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQE-IQENIEKIKGIFSSFIKYGTGK 120
            LQ  GH+P +L+GG T +IGDP  R  S R++ SQE +   +E ++     ++ +  G+
Sbjct: 78  RLQLAGHRPYALVGGATGLIGDP--RQTSERVLNSQETVAAWVESLRAQIEPYLSF-EGE 134

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
             A M+NN  W   +  +D LR++G  F V  M+  E V  RL  ++ +S+ EF+Y +LQ
Sbjct: 135 NAATMVNNLDWTAGMSALDFLRDVGKNFRVGTMVKKEIVAKRLNSDEGISYTEFSYQVLQ 194

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
             DF+EL + +   LQ GGSDQWGN+  G +L  +++     AL +PL+T A GTK GK+
Sbjct: 195 GNDFLELHRRHGVTLQTGGSDQWGNLTAGTELIRKVEGTHAHALGTPLITNADGTKFGKS 254

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEA 298
              A+WL+ EM SPY F+Q+W N  DADVV   K  T L  +EI+  A+    E    EA
Sbjct: 255 EGNAVWLDAEMCSPYAFYQFWLNTADADVVDRLKVFTFLTRAEIEEYAQKVADEPFRREA 314

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECF---DMSIHSQ--------HMPTISISKDEVS 347
           +K +A E+T + HG E   K   A+   F   D++             +P    ++ E  
Sbjct: 315 QKRLAWEVTALAHGEETTTKVIEASQAVFGGGDLTTVDPDTLTAVLAELPQADRTQWEGE 374

Query: 348 RG-MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G +  + L+V  G   S +EARR ++     +NN  +++        D  +  ++ +  
Sbjct: 375 PGTVTAVELLVSTGLVASRSEARRTVRDGGASVNNVRVTDADQVFTRDDAFAGRHLLVRR 434

Query: 407 GKKN 410
           GKKN
Sbjct: 435 GKKN 438


>gi|313665522|ref|YP_004047393.1| tyrosine--tRNA ligase [Mycoplasma leachii PG50]
 gi|312949275|gb|ADR23871.1| tyrosine--tRNA ligase [Mycoplasma leachii PG50]
          Length = 414

 Score =  241 bits (615), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 153/419 (36%), Positives = 225/419 (53%), Gaps = 20/419 (4%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTA-YIGYDLTASSLHAGHLTQLMLLFWL 63
           K+  L  L  RG I QI+N  E  IL +Q    A Y G+D TA SLH GHL  ++ L   
Sbjct: 2   KNSILEELKWRGLIKQITN--ESKILDAQNNNDAVYCGFDPTADSLHVGHLMMIITLKRF 59

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
              G KPI+L+GG T +IGDPSF+   R +   Q++  NI KI       I   +     
Sbjct: 60  ALQGFKPIALIGGATGMIGDPSFKANERALQTKQQVDHNINKISAQLKEIIPTVS----- 114

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
             +NN  WL +I  ID LR IG  F+++ +L+ ES+ +R+  +  LS  EF Y +LQA+D
Sbjct: 115 -FVNNRDWLENISLIDFLRGIGKHFNLSYLLAKESIATRV--QTGLSVTEFCYTMLQAFD 171

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERL--KTPKLFALTSPLLTTASGTKMGKTL 241
           F  L KN +C +Q+GGSDQWGNI  GID       K  K   +T  LLT + G K GKT 
Sbjct: 172 FYYLYKNNNCSIQIGGSDQWGNITSGIDFISDTVNKNNKAAGVTINLLTKSDGQKFGKTE 231

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEA--K 299
           SGA+WL+K  TS Y F+Q+W N  D D ++  K LT L   +I+++ K   ++ ++   +
Sbjct: 232 SGAVWLDKSKTSEYEFYQFWINQTDEDSINLLKCLTFLTKDQIEQLIKQHNQQPSKRLLQ 291

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQ-----HMPTISISKDEVSRGMGLLT 354
           K +A+E+T  VH ++  +KA       F  ++ S       M   S+   ++++   ++ 
Sbjct: 292 KTLASEMTKFVHQQQGLDKALKLTEAFFSGNLFSLTDDLFKMALNSLPNTQINKTTKVID 351

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            +++   A+S  EAR  L + AI INN II +E   I   D      + +  GKK + +
Sbjct: 352 ALIEVKAASSKREAREFLTNKAIMINNQIIEDENTLISSFDLIQNKYLLVKKGKKKYFV 410


>gi|184201190|ref|YP_001855397.1| tyrosyl-tRNA synthetase [Kocuria rhizophila DC2201]
 gi|183581420|dbj|BAG29891.1| tyrosyl-tRNA synthetase [Kocuria rhizophila DC2201]
          Length = 436

 Score =  241 bits (615), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 154/420 (36%), Positives = 227/420 (54%), Gaps = 15/420 (3%)

Query: 2   PAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
           P+F S     L+ RG I   ++P+ L        +T Y G+D TASSLH GHL QL+LL 
Sbjct: 13  PSFSS-LWEELNWRGLIQISTDPQALQEALDGEPITYYCGFDPTASSLHLGHLVQLLLLR 71

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQE-IQENIEKIKGIFSSFIKYGTGK 120
            LQ  GH PI L+GG T +IGDP  R  S R++ S+E + + ++ ++     F+ +  G 
Sbjct: 72  RLQLAGHHPIGLVGGSTGLIGDP--RQTSERILNSRETVAQWVDMLREQVQRFLSF-EGA 128

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
             A M+NN  W   +  ID LR+IG  F V  M+  + V  RL  E+ +S+ EF+Y ILQ
Sbjct: 129 NPARMVNNLDWTSQLSAIDFLRDIGKNFRVGTMIKKDIVAKRLNSEEGISYTEFSYQILQ 188

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
             DF+ L + YDC LQ GGSDQWGN+  G DL  + +   + A+ +PL+T + GTK GK+
Sbjct: 189 GLDFLNLYRQYDCVLQTGGSDQWGNLTSGTDLVRKTEGAAVHAIGTPLITNSDGTKFGKS 248

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN--EA 298
              AIWL+ E+TSPY F+Q+W N  DADV    K  T     EI  + +L  +E +  EA
Sbjct: 249 EGNAIWLDPELTSPYAFYQFWLNTADADVADRLKVFTFRTREEIAELERLTREEPHRREA 308

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECF------DMSIHSQHMPTISISKDEVSRGM-- 350
           ++++A ++ T+VHG +  ++A  A+   F      D+   +      ++    V  G   
Sbjct: 309 QRVLAADVNTLVHGEQATQQAVEASAAVFGRGSFEDLDASTLAAVAEALPGATVPGGTQH 368

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            ++ L+V  G + S + ARR LK   + +NN  +  E   +   D        L  GKKN
Sbjct: 369 AVVDLLVATGLSDSKSAARRTLKEGGVSLNNRKVQGEDAVVSPGDLLHGRFALLRRGKKN 428


>gi|313901028|ref|ZP_07834516.1| tyrosine--tRNA ligase [Clostridium sp. HGF2]
 gi|312953986|gb|EFR35666.1| tyrosine--tRNA ligase [Clostridium sp. HGF2]
          Length = 411

 Score =  241 bits (615), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 142/411 (34%), Positives = 221/411 (53%), Gaps = 20/411 (4%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I+ +++P +L+   + G +T YIG D T  SLH GH + L+    L++ GH PI
Sbjct: 8   LKYRGLINDVTSP-QLEEKLNNGGLTFYIGTDPTGDSLHIGHYSSLLCAKRLKEHGHHPI 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+GG T  IGDP    E R M+  + ++ N + +     +   +        M+NN  W
Sbjct: 67  MLVGGATGFIGDPKASGE-RNMLTKEVLEHNYQCLSKQIEALFGFE-------MVNNLDW 118

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
              I  ID LR+ G +F+VN M++ E+V+ RL  +  +S+ EF+YMILQA DF+ L ++ 
Sbjct: 119 TKDISVIDFLRDYGKYFNVNYMINKETVKRRL--DAGISYTEFSYMILQALDFLHLYEDK 176

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKL--FALTSPLLTTASGTKMGKTLSGAIWLNK 249
            C LQ+GG DQWGNI  G++L  +     +  + LT PL+T A GTK GK+ SG +WL+K
Sbjct: 177 GCTLQLGGQDQWGNITSGLELIRKKHGADVECYGLTMPLITKADGTKFGKSESGTVWLDK 236

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE--INEAKKIIATEIT 307
             TS Y  +Q+  N +D  V+ + K+LT L   EID + +    E    EA+K +A E+ 
Sbjct: 237 HKTSAYEMYQFLVNSEDEKVIDYLKKLTFLSKEEIDALEEKVKTEPHFREAQKTLAKEVV 296

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTI-----SISKDEVSRGMGLLTLIVKAGFA 362
           T +HG EE  KA       F  +I       +          E++  + L   +V+AG A
Sbjct: 297 TFLHGEEEYNKALKITNALFKGNIKELDAGELQDALKGFEAAEIADELTLTDTLVQAGIA 356

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
           +S  EAR  +   +I+IN   + + +  +  ++  S G   +  GK+N+ +
Sbjct: 357 SSKREAREWINQGSIQINGDKVKDVEFIVSSKNAISKGRTLIKKGKRNYFV 407


>gi|183601732|ref|ZP_02963102.1| tyrosyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           HN019]
 gi|219683736|ref|YP_002470119.1| tyrosyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           AD011]
 gi|241190770|ref|YP_002968164.1| tyrosyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           Bl-04]
 gi|241196176|ref|YP_002969731.1| tyrosyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis DSM
           10140]
 gi|254783568|sp|B8DU64|SYY_BIFA0 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|183219338|gb|EDT89979.1| tyrosyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           HN019]
 gi|219621386|gb|ACL29543.1| tyrosyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           AD011]
 gi|240249162|gb|ACS46102.1| tyrosyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           Bl-04]
 gi|240250730|gb|ACS47669.1| tyrosyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis DSM
           10140]
 gi|289178506|gb|ADC85752.1| Tyrosyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           BB-12]
 gi|295793759|gb|ADG33294.1| tyrosyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis V9]
          Length = 440

 Score =  241 bits (615), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 142/429 (33%), Positives = 231/429 (53%), Gaps = 29/429 (6%)

Query: 5   KSDFLSILSE---RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
           ++ F S+L E   RG I Q ++   L    +   V  Y G+D TA SLH G+L QL+++ 
Sbjct: 9   EAGFDSVLDELEWRGLISQSTDRDRLAHTLNGEPVHYYCGFDPTAPSLHIGNLVQLIIMR 68

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN-IEKIKGIFSSFIKYGTGK 120
            LQ+ GH PI+L+GG T +IGDP  R    R++  ++I E   E+++      ++   G 
Sbjct: 69  HLQEAGHHPIALVGGATGLIGDP--RQSGERILNPKDIVEQWCERLRIQIGGILEQ-EGS 125

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
                ++N  W  ++  +D LR+IG  F V  M+S + V  RL  E+ +SF EF+Y +LQ
Sbjct: 126 NPVTFVSNYDWTATMNVLDFLRDIGKNFRVGTMISKDIVARRLNSEEGISFTEFSYQVLQ 185

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
             D++ L  +YDC L++GGSDQWGN+  G+DL  +++   +  + SP++T A+G K GK+
Sbjct: 186 GNDYLYLYDHYDCVLELGGSDQWGNLTSGLDLIHKVRGVNVNVMASPIITDANGKKFGKS 245

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN---- 296
              A+WL+  M S Y F+Q+W N  D ++ S  K  T LP +EI+R+  ++  + N    
Sbjct: 246 EGNAVWLDPNMLSVYKFYQFWLNRPDVEMASLLKAFTFLPKAEIERL--VEATDTNPGAR 303

Query: 297 EAKKIIATEITTMVHGREEAEKAATAAMECF---------DMSIHSQHMPTISISKDEVS 347
           EA++++A E+T++VHG E   KA  A+   F         D+      +  + +  +   
Sbjct: 304 EAQRVLAWEVTSLVHGDEPTRKAIDASASLFGRGGDLADIDLETLESVLDGLKVENEAGE 363

Query: 348 R-------GMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG 400
           +       G  +    V AG   S +EAR+ +KS  + +NN  + +E+  +   DF    
Sbjct: 364 KVFAQALPGDRIAQAGVSAGLFKSISEARKTIKSGGVYVNNVRVEDEEQLLGDGDFLKGR 423

Query: 401 NIKLSFGKK 409
            + L  GKK
Sbjct: 424 FVVLRRGKK 432


>gi|295698352|ref|YP_003603007.1| tyrosyl-tRNA synthetase [Candidatus Riesia pediculicola USDA]
 gi|291157035|gb|ADD79480.1| tyrosyl-tRNA synthetase [Candidatus Riesia pediculicola USDA]
          Length = 427

 Score =  241 bits (614), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 138/389 (35%), Positives = 215/389 (55%), Gaps = 19/389 (4%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           K + + I  E   I Q+ + ++L     +  +T Y G+D T+ SLH GHL  L LL   Q
Sbjct: 5   KRNLIKIFKELKLIDQLIHEKKLVQTILKKNITLYCGFDPTSDSLHVGHLIPLFLLKTFQ 64

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GHKPI L+GG TS+IGDPSFRD  R + +  +I+    KI      F      K  A+
Sbjct: 65  NFGHKPIILVGGATSLIGDPSFRDSERSINQVDQIESWTRKIYNQIGIFFDSNHKKNKAI 124

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           ++NN  W   +K ID L  +G  FS+  ML  E ++++L+  Q +SF EF+Y +LQAYDF
Sbjct: 125 IVNNIEWFERMKIIDFLTTVGRNFSIKNMLRKELIKNKLENRQGISFSEFSYSLLQAYDF 184

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
            +L  +Y   LQ+GGSDQW NII GI+L ++L   ++F LT  L+T + G K GKT    
Sbjct: 185 YKLYTDYHASLQIGGSDQWSNIIVGIELIKKLSRKEVFGLTFSLITNSIGRKFGKTEKNN 244

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI-NEAKKIIA 303
           IWL+ + TSPY F+Q+W N+DD +   F      L MS    +  L+ K+   + +  +A
Sbjct: 245 IWLDPKKTSPYCFYQFWINLDDRNAQMF---FYLLLMSNSTLIHNLEMKKYPKKIQYFLA 301

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQH------------MPTISISKDEVSRGMG 351
            ++T ++HG+  ++ A   + + F+    SQ             +P I I   ++SR   
Sbjct: 302 KKVTEIIHGKYLSDMAHDISKKIFEYQKISQFKEEDFRNFLKLGVPKIEI---DLSRRYD 358

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKIN 380
           +  ++VK+    S ++AR  +++++I +N
Sbjct: 359 IQEILVKSKLLDSKSQARNMIENHSISVN 387


>gi|212715753|ref|ZP_03323881.1| hypothetical protein BIFCAT_00653 [Bifidobacterium catenulatum DSM
           16992]
 gi|212661120|gb|EEB21695.1| hypothetical protein BIFCAT_00653 [Bifidobacterium catenulatum DSM
           16992]
          Length = 435

 Score =  241 bits (614), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 137/409 (33%), Positives = 220/409 (53%), Gaps = 20/409 (4%)

Query: 5   KSDFLSILSE---RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
           ++ F S+L E   RG I Q ++   L    +   ++ Y G+D TA+SLH G+L QL+ + 
Sbjct: 9   EAGFESVLDELEWRGLISQSTDRDRLAEALNGDPISYYCGFDPTAASLHIGNLVQLINMR 68

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN-IEKIKGIFSSFIKYGTGK 120
            LQ  GH PI+L+GG T +IGDP  R    R +  +++     E++K      ++   G 
Sbjct: 69  HLQAAGHHPIALVGGATGLIGDP--RQSGERTLNPKDVVAGWAERLKAQIGGILEV-EGS 125

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
                ++N  W  S+  ID LR++G  F +  ML+ ++V  RL  E  +SF EF+Y +LQ
Sbjct: 126 NPVRFVSNYDWTASMNVIDFLRDVGKNFRLGTMLAKDTVARRLNSEDGISFTEFSYQVLQ 185

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
             DF+ L   Y C L++GGSDQWGN+  G+DL  +++   +   TSP++T A G K GK+
Sbjct: 186 GNDFLHLFDEYHCVLELGGSDQWGNLTSGLDLIHKVRGVDVNVFTSPIITDAQGKKFGKS 245

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEA 298
              A+WL+  M SPY F+Q+W N  D+++ +  K  T LP  EI+R+ +         EA
Sbjct: 246 EGNAVWLDGTMLSPYKFYQFWFNRPDSEMENLLKVFTFLPKVEIERLVEESKTNPGAREA 305

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECF---------DMSIHSQHMPTISISKDEVSRG 349
           ++ +A E+T++VHG E   +A  AA   F         D S     +  + I  +     
Sbjct: 306 QRTLAWEVTSLVHGEEATRQAIEAAGALFGRGGDLAGVDESTLEAALDGVKIDDEFAKAA 365

Query: 350 MG--LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
           +G  +    +KAG   S +EAR+ +K+  + +NN+ + +E+  +   DF
Sbjct: 366 VGDRVAEAGMKAGLFKSISEARKTIKAGGVYLNNTRVEDEEQILNENDF 414


>gi|326692325|ref|ZP_08229330.1| tyrosyl-tRNA synthetase [Leuconostoc argentinum KCTC 3773]
          Length = 415

 Score =  241 bits (614), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 144/395 (36%), Positives = 210/395 (53%), Gaps = 17/395 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG ++Q+++   L    + G + AY+G D TA SLH GHL   M+L   Q  
Sbjct: 2   NFIEDLKWRGALNQVTDEEGLLEAMADGKIGAYVGTDPTADSLHLGHLIPFMVLKRFQNA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           G K + ++GG T  IGDP    E R+++  +++ EN    KGI +   K   G  D  ++
Sbjct: 62  GGKAVIIVGGATGAIGDPRPTTE-RQLLTPEQLAENE---KGITAQVTKL-FGDDDTRIV 116

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  +   D LR+ G  FS+N ML  + V SRL  E  +SF EF Y +LQ  DF E
Sbjct: 117 NNNDWLGKLTLTDFLRDYGKLFSINVMLKKDVVASRL--ETGISFTEFTYQVLQGIDFHE 174

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLK--TPKLFALTSPLLTTASGTKMGKTLSGA 244
           L +  D +LQ+GGSDQWGNI  GIDL   L+    K F LT PL+T ++G K GK+   A
Sbjct: 175 LWRREDVKLQIGGSDQWGNITSGIDLIHSLEGNDAKAFGLTIPLMTDSTGKKFGKSEGNA 234

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKII 302
           IWL+ + TSPY F+Q+W N  DADVV + K  T L + EI+ +AK       +  A++ +
Sbjct: 235 IWLDPKKTSPYTFYQFWLNQSDADVVKYLKYFTFLSVDEIETLAKAVETSPGDRLAQRRL 294

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRGMGLLTLI 356
           A E+T  VHG+   E A   +   F   + +     I        S D  +    ++  +
Sbjct: 295 AQEVTKFVHGQAAVEDAEKLSAALFSGDVATLSAAQIGDAFGGVPSFDTPNEIKNVVDFL 354

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
           V  G   S  +AR  + + AI IN   +++   ++
Sbjct: 355 VDGGVEPSKRQAREDVTNGAITINGEKVTDVAAEV 389


>gi|116491773|ref|YP_811317.1| tyrosyl-tRNA synthetase [Oenococcus oeni PSU-1]
 gi|122276045|sp|Q04D20|SYY_OENOB RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|116092498|gb|ABJ57652.1| tyrosyl-tRNA synthetase [Oenococcus oeni PSU-1]
          Length = 417

 Score =  241 bits (614), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 146/395 (36%), Positives = 214/395 (54%), Gaps = 25/395 (6%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D +  L  RG I Q ++   L  L     ++ Y+G D TA S+H G+L  L +L   Q  
Sbjct: 2   DIIEDLKWRGSIKQTTDESGLANLLKHKKISLYVGVDPTAKSIHIGNLIPLTILKRFQNA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+P+ ++GGGT +IGDPS +   R+++      EN+ +I    +       GK    ++
Sbjct: 62  GHRPVIVVGGGTGMIGDPSGKASERKLLPKDVFDENVSRITKQMTRLF----GKDGFEIV 117

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  +  I  LR+ G  FS+N ML  + V SRL  +  +SF EF Y ILQA DF  
Sbjct: 118 NNYDWLSKLDLISFLRDYGKLFSINVMLKRDVVASRL--QAGISFTEFTYQILQAIDFYT 175

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSGA 244
           L K    +LQ+GG+DQ+GNI  G++L  +L  P  + F LT PLL  + GTK GK+  GA
Sbjct: 176 LFKEKAVQLQVGGADQYGNISSGVELIHKLVGPDTEAFGLTVPLLLKSDGTKFGKSAGGA 235

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA-KLQGK-EINEAKKII 302
           IWL+ E  SPY F+Q++ N  DADVV   K  T L   EI+ +A K++ + E  EA++ +
Sbjct: 236 IWLDPEFLSPYEFYQFFYNQTDADVVKLLKIFTFLNREEIEELADKVKNEPEKREAQRRL 295

Query: 303 ATEITTMVHGREEAEKAATAAMECFD----------MSIHSQHMPTISISKDEVSRGMGL 352
           A E+T  VHG+   E+A   +   F+          +++    +PTI ++  +      +
Sbjct: 296 AEEVTKFVHGQTAVEEAGKISRILFNGDVENLTASQVAVAFSGVPTIEVADQKTD----V 351

Query: 353 LTLIVKAG-FATSTNEARRHLKSNAIKINNSIISN 386
           + L+VK      S  +AR  LK+ AI IN   ISN
Sbjct: 352 VELLVKDKVIEKSRRQAREDLKNGAITINGEKISN 386


>gi|301120217|ref|XP_002907836.1| tyrosyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
 gi|262106348|gb|EEY64400.1| tyrosyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
          Length = 428

 Score =  241 bits (614), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 152/430 (35%), Positives = 228/430 (53%), Gaps = 25/430 (5%)

Query: 6   SDFLSILSERGFI----HQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
           S  L+ L +RG +    HQ +      +L S      Y G+D TA SLH G+L Q + L 
Sbjct: 2   SRALAALRQRGMLAALTHQEAGASIDKLLQSSRAPAVYCGFDPTADSLHLGNLLQGIALR 61

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKT 121
             Q+ G +PI L+GG T +IGDPS + E R ++    +  N ++I    S+ + +   KT
Sbjct: 62  HFQRAGVRPILLVGGATGMIGDPSGKSEERVLLSDDTVLHNAQEIAKGLSAVLDFDDPKT 121

Query: 122 DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA 181
            A++ NN  W   +  +  +R+IG  F VN ML  ESV+ RL+ +Q +SFLEF+Y + QA
Sbjct: 122 GAIICNNAEWHTQMSAVTWMRDIGRHFRVNAMLQRESVKKRLETDQGISFLEFSYQLFQA 181

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
           YDF+ L +NY C  Q+GGSDQWGNI  GI+L  +     +F  T  LLTTA+G K GK+ 
Sbjct: 182 YDFLHLYRNYGCVAQIGGSDQWGNIASGIELVRKSTGEGVFGATLALLTTATGEKYGKSA 241

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL-----QGKEIN 296
             AIWL+ E TS ++F+Q++   DD DV    K L +    E+D +  +     +  E  
Sbjct: 242 GNAIWLDSEKTSVFDFYQFFLRSDDRDV---EKLLNSFTFREVDEIHGIIAEHEKAPEKR 298

Query: 297 EAKKIIATEITTMVHGREEAEKAATAAMECF-----------DMSIHSQHMPTISISKDE 345
            A+K++A EIT M+HG +E  KAA  A E             +M   +   P   +S+ +
Sbjct: 299 AAQKVLAEEITVMMHG-QEGLKAALDATEMLFGKKTGPLTSEEMLCMAGDAPMTVLSRAD 357

Query: 346 VSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLS 405
           V     L+ L V+ G   S  E RR +KS  + +NN  + +  L+I   +      + + 
Sbjct: 358 VIN-QSLVDLAVRIGATKSKAECRRLIKSGGVYLNNERVESAALRIGKSNLLDDKVLVVR 416

Query: 406 FGKKNHIICH 415
            G++N+ I  
Sbjct: 417 VGRRNNFIVQ 426


>gi|323341676|ref|ZP_08081909.1| tyrosine--tRNA ligase [Erysipelothrix rhusiopathiae ATCC 19414]
 gi|322464101|gb|EFY09294.1| tyrosine--tRNA ligase [Erysipelothrix rhusiopathiae ATCC 19414]
          Length = 420

 Score =  240 bits (613), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 146/421 (34%), Positives = 228/421 (54%), Gaps = 16/421 (3%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           K +FL  L+ RG +  ++N   L+    Q + T Y G+D TA SLH GHL QL+LL   Q
Sbjct: 4   KMNFLEELNWRGLVKDVTNYEALEKRLEQPI-TLYCGFDPTADSLHVGHLQQLILLKRYQ 62

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GHKPI+L+GG T +IGDP    E R M+   ++Q+N++ I       +   +      
Sbjct: 63  MQGHKPIALVGGATGMIGDPRPTTE-RSMLNDADLQKNVDGIGAQIERILS--SDNNPVT 119

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           ++NN  WL  +  +D LR+ G FFSV+ ML+ +++  RL     +SF EF+Y ILQ+ DF
Sbjct: 120 IVNNRDWLGGLTVLDFLRDYGKFFSVSNMLAKDTIAKRLS--TGISFTEFSYTILQSIDF 177

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLS 242
           + L KNY   LQ+GGSDQWGN++ G DL  +++ P  ++F +TS L+  + GTK GK+  
Sbjct: 178 LHLYKNYGIELQIGGSDQWGNLVSGADLIRKVEGPEAEVFGITSHLIMKSDGTKFGKSEG 237

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKK 300
             IWL++  T  Y+F+Q++ N  D DV+ F KRL+   + EI  +    ++   +  A+K
Sbjct: 238 QNIWLDENRTDAYSFYQFFINTSDDDVIDFLKRLSFKSVEEIQAIEASFIKEPHLRLAQK 297

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI-SISKD----EVSRGMGLLTL 355
            +A E+T +V G+E    A       F  ++    +  I  +  D    EVS    ++ L
Sbjct: 298 ELAKELTEVVFGKEGFAMAERVTNALFSGNVQELTVEQIRQVFADSASIEVSADENIVEL 357

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN-HIIC 414
           +V      S  EAR+ ++  AI++N  ++++    I   +        +  GKK  HI  
Sbjct: 358 LVNTKVCPSKREARQLIEGGAIRVNGEVVNDTDFVISKDNAIGKEVTVIRRGKKTYHIFN 417

Query: 415 H 415
           H
Sbjct: 418 H 418


>gi|290891415|ref|ZP_06554475.1| hypothetical protein AWRIB429_1865 [Oenococcus oeni AWRIB429]
 gi|290478927|gb|EFD87591.1| hypothetical protein AWRIB429_1865 [Oenococcus oeni AWRIB429]
          Length = 417

 Score =  240 bits (613), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 148/395 (37%), Positives = 215/395 (54%), Gaps = 25/395 (6%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D +  L  RG I Q ++   L  L     ++ Y+G D TA S+H G+L  L +L   Q  
Sbjct: 2   DIIEDLKWRGSIKQTTDESGLANLLKHKKISLYVGVDPTAKSIHIGNLIPLTILKRFQNA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+P+ ++GGGT +IGDPS +   R+++      EN+ +I    +       GK    ++
Sbjct: 62  GHRPVIVVGGGTGMIGDPSGKASERKLLPKDVFDENVSRITKQMTRLF----GKDGFEIV 117

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  +  I  LR+ G  FS+N ML  + V SRL  +  +SF EF Y ILQA DF  
Sbjct: 118 NNYDWLSKLDLISFLRDYGKLFSINVMLKRDVVASRL--QAGISFTEFTYQILQAIDFYT 175

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSGA 244
           L K    +LQ+GG+DQ+GNI  G++L  +L  P  + F LT PLL  + GTK GK+  GA
Sbjct: 176 LFKEKAVQLQVGGADQYGNISSGVELIHKLVGPDTEAFGLTVPLLLKSDGTKFGKSAGGA 235

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA-KLQGK-EINEAKKII 302
           IWL+ E  SPY F+Q++ N  DADVV   K  T L   EI+ +A K++ + E  EA++ +
Sbjct: 236 IWLDPEFLSPYEFYQFFYNQTDADVVKLLKIFTFLNREEIEELADKVKNEPEKREAQRRL 295

Query: 303 ATEITTMVHGR---EEAEKAA-------TAAMECFDMSIHSQHMPTISISKDEVSRGMGL 352
           A E+T  VHG+   EEAEK +          +    +++    +PTI ++  +      +
Sbjct: 296 AEEVTKFVHGQTAVEEAEKISRILFNGDVENLTASQVAVAFSGVPTIEVADQKTD----V 351

Query: 353 LTLIVKAG-FATSTNEARRHLKSNAIKINNSIISN 386
           + L+VK      S  +AR  LK+ AI IN   ISN
Sbjct: 352 VELLVKDKVIEKSRRQAREDLKNGAITINGEKISN 386


>gi|294791514|ref|ZP_06756671.1| tyrosine--tRNA ligase [Scardovia inopinata F0304]
 gi|294457985|gb|EFG26339.1| tyrosine--tRNA ligase [Scardovia inopinata F0304]
          Length = 442

 Score =  240 bits (613), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 141/428 (32%), Positives = 234/428 (54%), Gaps = 26/428 (6%)

Query: 5   KSDFLSILSE---RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
           ++ F ++L E   RG ++Q ++ ++L    +   +T Y G+D TA+SLH G+L QL+++ 
Sbjct: 9   EAGFATLLEELEWRGLVNQSTDRQQLAAALNGNPLTFYAGFDPTAASLHIGNLVQLVVMR 68

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN-IEKIKGIFSSFIKYGTGK 120
            LQ+ GH PI+L+GG T +IGDP  R    R + S+ + E    +++   S F+    G 
Sbjct: 69  HLQEAGHHPIALVGGATGLIGDP--RQSGERTLNSKSVVEAWARRLQAQISRFL-VTDGS 125

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
                ++N  W  S+  ID LR++G  F +  MLS + V  RL  ++ +SF EF+Y +LQ
Sbjct: 126 NPVRFVSNYDWTASMSVIDFLRDVGKNFRLGTMLSKDIVARRLNSQEGISFAEFSYQVLQ 185

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
             D++ L       LQ+GG+DQWGN++ G+DL  +++  ++  +TSP++T + G K GK+
Sbjct: 186 GNDYLHLYDECGVTLQIGGADQWGNLVSGLDLIRKVRGVQVNVMTSPIITDSQGKKFGKS 245

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA-KLQGKE-INEA 298
             GAIWL+  M SPY F+Q+W N  D  V+   K  T LP  EI+R+  +++      EA
Sbjct: 246 EGGAIWLDASMLSPYRFYQFWFNQPDDQVIKLLKYFTFLPKEEIERLEIEVESHPGAREA 305

Query: 299 KKIIATEITTMVHGREEAEKA----------ATAAMECFDMSIHSQHMPTISISKD---- 344
           ++ +A E+T+ VHG++ A++A             ++E  D S+    +  + +S      
Sbjct: 306 QRTLAWEVTSFVHGQDAAQEAIDAAAALFGRGQVSLEDIDQSVLEAALDGLKVSGQTGQK 365

Query: 345 ---EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
              +   GM +    V AG   S +EAR+ + S  I INN  + + + +++  DF     
Sbjct: 366 EFAQARVGMRITQAAVAAGLVKSQSEARKTIASGGIYINNKRVEDVEQELEQSDFLHNRF 425

Query: 402 IKLSFGKK 409
             L  GKK
Sbjct: 426 ALLRRGKK 433


>gi|313836595|gb|EFS74309.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL037PA2]
 gi|314928104|gb|EFS91935.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL044PA1]
 gi|314972104|gb|EFT16201.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL037PA3]
 gi|328907926|gb|EGG27686.1| tyrosine--tRNA ligase [Propionibacterium sp. P08]
          Length = 418

 Score =  240 bits (613), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 141/401 (35%), Positives = 217/401 (54%), Gaps = 14/401 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           SD L  L  RGFI   ++   L    +QG VT Y+G+D TA SLH GHL QLML+  LQ+
Sbjct: 2   SDLLDDLEWRGFIADSTDREALKAEFAQGPVTFYVGFDPTAKSLHIGHLVQLMLVRALQE 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+P+ L+GG T +IGDP    E RRM   + +   +E IK   S ++    G   A +
Sbjct: 62  RGHRPLLLVGGATGLIGDPKMTGE-RRMNDREVVAGWVESIKDQVSKYVDT-DGPNAARI 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  W      ++ LR++G  FSVNRML+ + V  RL  E  +S+ EF+Y++LQ+ DF 
Sbjct: 120 VNNYDWTAEYTALNFLRDVGKHFSVNRMLARDVVARRL--ESGISYTEFSYVLLQSLDFY 177

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           EL K Y C LQ G  DQWGNI  G +   R     +  L +PLLT A GTK GKT SG +
Sbjct: 178 ELHKRYGCTLQTGAQDQWGNITAGAEFIRRTTGDVVHGLVTPLLTKADGTKYGKTESGTV 237

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIA 303
           W++ E+TS Y F Q++ N +D+ V+ + K  +     EI+ +A+   +E     A++ +A
Sbjct: 238 WVDPELTSAYAFHQFFLNAEDSKVIEYLKIFSPRSREEIEELARRTEEEPWRRAAQRCLA 297

Query: 304 TEITTMVHGREEAEKAATAAMECFDM----SIHSQHMPTISISKDEVSRGMG----LLTL 355
            ++T +VHG ++ + A  AA   F       +  + + +++   D      G    ++  
Sbjct: 298 DDLTDLVHGVDQRKAAEAAAQAIFGCGELGDLDERTVLSLADELDAAHCDGGEYPTVVDA 357

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
           +V AG   + +  +R +      +NN+ ++    ++   DF
Sbjct: 358 MVAAGVVDTKSAGKRAVTEGGAYLNNAKVTEPDQRLTDDDF 398


>gi|226226049|ref|YP_002760155.1| tyrosyl-tRNA synthetase [Gemmatimonas aurantiaca T-27]
 gi|226089240|dbj|BAH37685.1| tyrosyl-tRNA synthetase [Gemmatimonas aurantiaca T-27]
          Length = 428

 Score =  240 bits (612), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 142/390 (36%), Positives = 209/390 (53%), Gaps = 21/390 (5%)

Query: 10  SILSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           S+L E  +   IS   E L    + G V+ Y G+D TASSLH G+L  +M L  LQ+ GH
Sbjct: 6   SLLDELAWRELISQHTEGLPAALAAGTVSGYCGFDPTASSLHVGNLIPIMGLMHLQRAGH 65

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           +P +L+GG T +IGDPS R   R +     I  N E I+G  S F+ +  G   A ++NN
Sbjct: 66  RPYALVGGATGMIGDPSGRASERVLQGLDAIHSNAEAIRGQLSRFLDF-DGPRGAKLVNN 124

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL  +  +D LRE G  FSVN ML+ +SV+SR+  +  +S+ EF+YM+LQA+DF EL 
Sbjct: 125 VDWLSKLSVLDFLRETGKHFSVNYMLAKDSVKSRI--DGGISYTEFSYMLLQAHDFWELN 182

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK-TLSGAIWL 247
           ++    LQ GGSDQWGNI  G++L  R        LT PL+T A G+K GK T  G++WL
Sbjct: 183 RSEGVTLQFGGSDQWGNITAGLELIRRSGGADSNGLTFPLITNADGSKFGKSTGGGSVWL 242

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM-AKLQ-GKEINEAKKIIATE 305
           + E TSPY F+Q+W   DD D   + +  T   + E+  + A+++   E   A++ +A E
Sbjct: 243 DPERTSPYQFYQFWMGADDRDASRYLRYYTLFSLDEVTALDAEVRTAPEKRAAQRALAVE 302

Query: 306 ITTMVHGREEA-----------EKAATAAMECFDMSIHSQHMPTISI---SKDEVSRGMG 351
           +T+ VH  E A           EKA   A+    +      +P       ++   + G+ 
Sbjct: 303 VTSRVHSAEAARVAQEVSALLFEKADPQALSGEALKALRAEIPFAEYEPPAEGAPAEGID 362

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINN 381
           +   +   G A S   A+R L+   + +N 
Sbjct: 363 VYQCLTLLGIAASRGAAKRLLEQGGVSVNG 392


>gi|261749629|ref|YP_003257315.1| putative tyrosyl-tRNA synthetase 1 [Blattabacterium sp.
           (Periplaneta americana) str. BPLAN]
 gi|261497722|gb|ACX84172.1| putative tyrosyl-tRNA synthetase 1 [Blattabacterium sp.
           (Periplaneta americana) str. BPLAN]
          Length = 427

 Score =  240 bits (612), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 140/401 (34%), Positives = 216/401 (53%), Gaps = 25/401 (6%)

Query: 37  TAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRS 96
           T YIG+D T+ SLH G L  +++L   QK GHK I L+GG T +IGDPS + + R     
Sbjct: 30  TIYIGFDPTSDSLHLGSLLPIIILIHFQKLGHKSIVLIGGATGLIGDPSEKKDQRIFFSL 89

Query: 97  QEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSF 156
           + +Q+N E IK      + + + KT+  +LNN +W+  I  +D LR +G  F +N M+S 
Sbjct: 90  ETLQKNAESIKKQLYKLLNFYSEKTE--LLNNFSWIKKISLLDFLRNVGKHFPINYMMSK 147

Query: 157 ESVRSRL--KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
           +SV+ R+   +   +SF EF+Y ++Q YDF+ L K  +C LQ+GGSDQWGNI  GI+L  
Sbjct: 148 DSVKKRIDNNKNNGMSFTEFSYSLIQGYDFLYLNKEKNCLLQIGGSDQWGNITTGIELIR 207

Query: 215 RLKTPKLFALTSPLLTTASGTKMGKTLSGA-IWLNKEMTSPYNFWQYWRNIDDADVVSFA 273
           +    K + +T PL+T + G K GK+  G  IWL+++ T+PY F+Q+W N+ D ++  F 
Sbjct: 208 KKTGKKAYGITFPLVTKSDGIKFGKSEKGENIWLDRKRTTPYKFYQFWMNVSDKEIEKFI 267

Query: 274 KRLTTLPMSEIDR--MAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFD--- 328
           K  T     +I+   +   +  E    +K +A EIT  VHG+   E+    +   F    
Sbjct: 268 KIYTFFSKEKIESLILKHRKNPEKRFLQKRVAEEITQWVHGKMAYEEVVKISHVLFGKKY 327

Query: 329 -------------MSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSN 375
                         SI+ +++P + +   E  +G+ LL ++ K+    S +EA R L  N
Sbjct: 328 INELLLSLDEKILFSIY-ENIPHMKLPYKEFEKGVFLLDVLKKSSLFASKSEANRALNLN 386

Query: 376 AIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +I IN  +I    L  K ++      I   FGKKN  I  +
Sbjct: 387 SISINKKLIKKNILLHK-ENLIGKKYILFQFGKKNFFITKV 426


>gi|227510794|ref|ZP_03940843.1| tyrosine-tRNA ligase [Lactobacillus brevis subsp. gravesensis ATCC
           27305]
 gi|227189733|gb|EEI69800.1| tyrosine-tRNA ligase [Lactobacillus brevis subsp. gravesensis ATCC
           27305]
          Length = 420

 Score =  240 bits (612), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 137/393 (34%), Positives = 210/393 (53%), Gaps = 31/393 (7%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG ++Q ++   L  L     ++ Y G D T  S+H GHL   M++   +  GH P 
Sbjct: 9   LKWRGAVNQQTDAEGLKNLTEHNSISLYCGVDPTGDSMHIGHLIPFMMMKRFELAGHHPY 68

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIE----KIKGIFSSFIKYGTGKTDALMLN 127
            L+GG T  IGDPS R   R++   +++Q N++    ++K +F        G ++   +N
Sbjct: 69  ILIGGATGSIGDPSGRKSERQLQTMEKVQHNVDALTRQMKRLFG-------GDSNITFVN 121

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  I  +D LR+ G   ++N ML+ + V SRL  +  +SF EF Y ILQ+ DF+ L
Sbjct: 122 NYDWLSKISLLDFLRDYGKLVNINTMLAKDIVASRL--DVGISFTEFTYQILQSVDFLTL 179

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSGAI 245
              Y+ +LQ+GG+DQWGNI  GID+  ++K P  +++ LT PL+  A GTK GKT  GAI
Sbjct: 180 YSKYNVQLQIGGADQWGNITAGIDMIHKIKGPETQVYGLTIPLMLKADGTKFGKTAGGAI 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIA 303
           WL+ + TSPY F+Q+W N DD DVV + K  T L   EI  +AK   +   E  A++ +A
Sbjct: 240 WLDPKKTSPYEFYQFWLNQDDRDVVKYLKYFTFLSQDEISELAKSVKEHPEERLAQRRLA 299

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHM----------PTISISKDEVSRGMGLL 353
            E+T  VHG+E    +   +   F   I   ++          P++ I  D  +    ++
Sbjct: 300 EEVTRFVHGQEALTTSEKISDILFSGDITKLNVAEVQDAFGKAPSVEIKSDPKN----IV 355

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISN 386
            L+V      S  +AR  + + AI +N S + +
Sbjct: 356 DLLVDTEIEPSKRQAREDVTNGAITVNGSKVED 388


>gi|163783432|ref|ZP_02178424.1| tyrosyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
 gi|159881354|gb|EDP74866.1| tyrosyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
          Length = 418

 Score =  240 bits (612), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 146/426 (34%), Positives = 241/426 (56%), Gaps = 27/426 (6%)

Query: 3   AFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
            F  D +  L+ RGFI  +++     I   +  +T Y G+D TA SLH G+L  +  L  
Sbjct: 2   GFIKDAIEELTWRGFIKDVTDK---SIEVKEEKLTVYAGFDPTAPSLHLGNLIPVAALRV 58

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD 122
            QK G+  I ++GG T  IGDPS + + R ++  +++  N EKI+      IK   GK D
Sbjct: 59  FQKHGNPVIVIVGGATGRIGDPSGKSKERPILPEEDLIRNKEKIE----VQIKKLLGK-D 113

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
             +L+N  W  +   ID LR++G + SVNR++    + +RL RE+ LSF EF Y +LQA+
Sbjct: 114 VPVLDNYEWFKNFGLIDFLRDVGKYVSVNRLVKHTFINNRLSREEFLSFAEFTYPLLQAF 173

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DF+ L   + C++Q+GGSDQWGNI+ G++L +RL+  K+F +T PLLTT  G K+GK+  
Sbjct: 174 DFLHLYDRFGCKVQIGGSDQWGNIVEGVELIQRLRREKVFGVTFPLLTTEDGHKIGKSEG 233

Query: 243 G--AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPM--SEIDRMAK--LQGKEIN 296
           G   +WL++ MTSP++ +QY+  + D+D +    RL +L M   E++ + +   Q  E+ 
Sbjct: 234 GKKTLWLDESMTSPFDAYQYFIRLSDSDAIKLF-RLFSLSMVKEEVENIIEEHRQSPELR 292

Query: 297 EAKKIIATEITTMVHGREEAEKAATAAMECF---------DMSIHSQHMPTISISKDEVS 347
           + +K++A E+ T VHG+E A +    +   F         D+S  +      +++KDE+ 
Sbjct: 293 KVQKLLAREVITWVHGKEAAVECEKLSDFLFSKDPKTNLEDISKRAISWVATTVAKDEI- 351

Query: 348 RGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFG 407
           + + L  L +KA    S NE R +L +  I++N   + ++    +L  F +   + ++ G
Sbjct: 352 KSLQLSDLFMKANLVKSKNEFRSNLMNKGIRVNGRTVVSDMPATEL--FRNRSVVIIAKG 409

Query: 408 KKNHII 413
           K+  I+
Sbjct: 410 KQRGIV 415


>gi|226491732|ref|NP_001141566.1| hypothetical protein LOC100273682 [Zea mays]
 gi|194705090|gb|ACF86629.1| unknown [Zea mays]
          Length = 496

 Score =  240 bits (612), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 152/446 (34%), Positives = 229/446 (51%), Gaps = 42/446 (9%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           + +L +RG +  I++  E       G +  Y G+D TA SLH G+L  L+ L W ++ GH
Sbjct: 54  VDVLMKRGLVEAITS--EALAAARPGELKVYCGFDPTAESLHLGNLLGLVALSWFRRCGH 111

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFI--------KYGTGK 120
             ++L+GG T  +GDPS +   R  +    ++ N + IK + +  +        +  +G+
Sbjct: 112 TAVALIGGATGRVGDPSGKSSERPELGIAAVEGNSDAIKSLVAQILGRVPEPAHRSHSGQ 171

Query: 121 TDA---------------LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR 165
            +                L+L+N  W   I  +D LRE+G F  V  M++ ESV+ RL  
Sbjct: 172 KELSLDNSANSSQTMGSFLILDNYDWWKDITLLDFLREVGRFARVGTMIAKESVKKRLAS 231

Query: 166 EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER-LKTPKLFAL 224
           E  +S+ EF Y +LQ YDF+ + KN    +Q+GGSDQWGNI  G +L  + L+      L
Sbjct: 232 EDGMSYTEFTYQLLQGYDFLYMFKNMGVNVQIGGSDQWGNITAGTELIRKILQVEGAHGL 291

Query: 225 TSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI 284
           T PLL  + GTK GKT  GAIWL+ +M SPY F+QY+  + D DV+ F K LT L + EI
Sbjct: 292 TFPLLLKSDGTKFGKTEDGAIWLSSKMLSPYKFYQYFFAVPDIDVIRFMKILTFLSLDEI 351

Query: 285 ----DRMAKLQGKEINEAKKIIATEITTMVHGR---EEAEKAATAAMECFDMSIHSQ--- 334
               D M K  G   N  +K +A E+T  VHG    EEA KA  A        + +Q   
Sbjct: 352 LELEDSMKK-PGYVPNTVQKRLAEEVTRFVHGEEGLEEALKATEALRPGAQTQLDAQTIE 410

Query: 335 ----HMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQ 390
                +P+ S++ D+V +   L+ L V  G  TS +  +R +K   + +NN  I +E   
Sbjct: 411 GIADDVPSCSLAYDQVFKSP-LIDLAVSTGLLTSKSAVKRLIKQGGLYLNNVRIDSEDKL 469

Query: 391 IKLQDFDSTGNIKLSFGKKNHIICHL 416
           ++  D      + LS GKKN ++  +
Sbjct: 470 VEEGDIVDGKVLLLSAGKKNKMVVRI 495


>gi|260102211|ref|ZP_05752448.1| tyrosine-tRNA ligase [Lactobacillus helveticus DSM 20075]
 gi|260083982|gb|EEW68102.1| tyrosine-tRNA ligase [Lactobacillus helveticus DSM 20075]
          Length = 420

 Score =  240 bits (612), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 148/387 (38%), Positives = 204/387 (52%), Gaps = 17/387 (4%)

Query: 5   KSDFLSILSERGFIHQISNPRELDI-LCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           K D L  L  RG I+Q ++   L + L     +  Y G D T  SLH GHL   M+L   
Sbjct: 3   KFDILEDLKWRGAINQETDEEGLRMYLAEHDDLALYCGTDPTGDSLHIGHLIPFMILKRF 62

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q   + P+ L+GGGT  IGDPS R   R +  + +++ N E      ++ +K   G  + 
Sbjct: 63  QMASYHPVILIGGGTGAIGDPSGRKTERTLQTADQVKHNEE----CLTNQMKKLFGTENF 118

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            + NN  WL  +  ID LR+ G FF VN M++ + V SRL  E  +SF EF Y ILQA D
Sbjct: 119 EIRNNAEWLGKLNLIDFLRDYGKFFQVNNMINKDVVASRL--ENGISFTEFTYQILQAID 176

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK--LFALTSPLLTTASGTKMGKTL 241
           F  L K+   +LQ+GGSDQWGNI  GIDL  +L+      F LT PL+  A GTK GK+ 
Sbjct: 177 FYHLNKDDGVQLQIGGSDQWGNITAGIDLIHKLEGADRPAFGLTIPLMLKADGTKFGKSA 236

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAK 299
            GA+WL+ E TSPY F+Q+W N DD DVV + K  T L   EI+ +A+   KE     A+
Sbjct: 237 GGAVWLDPEKTSPYEFYQFWINQDDRDVVKYLKYFTFLSREEIEDLAEKTEKEPWKRAAQ 296

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI------SISKDEVSRGMGLL 353
           K +A E+T  VHG    ++A       F  +I +  +  I      + S +  S    L+
Sbjct: 297 KRLAEEVTKFVHGEAGLKEAQMITDALFSGNIKNLSVTQIEQGLKNAPSAEAGSEKKNLV 356

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKIN 380
             +V      S  +AR  +K+ AI +N
Sbjct: 357 DFLVDTKIEPSKRQAREDIKNGAIYVN 383


>gi|288928869|ref|ZP_06422715.1| tyrosine--tRNA ligase [Prevotella sp. oral taxon 317 str. F0108]
 gi|288329853|gb|EFC68438.1| tyrosine--tRNA ligase [Prevotella sp. oral taxon 317 str. F0108]
          Length = 433

 Score =  239 bits (611), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 131/326 (40%), Positives = 188/326 (57%), Gaps = 9/326 (2%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           K +F+  L  RG + QI    E   L  +  VTAY+G D TA SLH GHL  +M+L  LQ
Sbjct: 2   KKNFVEELRWRGMLAQIMPGTEE--LLQKETVTAYLGTDPTADSLHIGHLAGIMMLRHLQ 59

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY-GTGKTDA 123
             GHKPI L+GG T +IGDPS +   R ++ S+ +  N E IK   + F+ +   G   A
Sbjct: 60  MCGHKPIILVGGATGMIGDPSGKSAERNLLDSKTLYHNQECIKAQVAKFLDFDAKGDNAA 119

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQA 181
            M+NN  W+    ++D  R +G   +VN M++ +SV+ RL  +    LSF EF Y +LQ 
Sbjct: 120 EMVNNYDWMKDFSFLDFARTVGKHITVNYMMAKDSVKKRLNGDARDGLSFTEFTYQLLQG 179

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK--TPKLFALTSPLLTTASGTKMGK 239
           YDF+ L +   C+LQ+GG+DQWGN+  G +L  R      + +ALT PL+T A GTK GK
Sbjct: 180 YDFLHLYETKGCKLQLGGNDQWGNMTTGAELIRRTLGIENEAYALTCPLITKADGTKFGK 239

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEA- 298
           T  G IWL+ + TSPY F+Q+W N+ DAD   + K  T+L    ID +   Q ++     
Sbjct: 240 TEGGNIWLDAKRTSPYMFYQFWLNVSDADAERYIKIFTSLDKETIDALVAEQNEDPGRRP 299

Query: 299 -KKIIATEITTMVHGREEAEKAATAA 323
            ++ +A E+T MVH +   ++A  A+
Sbjct: 300 LQRRLAEEVTVMVHSQAALDQAMEAS 325


>gi|260584362|ref|ZP_05852109.1| tyrosine--tRNA ligase [Granulicatella elegans ATCC 700633]
 gi|260157880|gb|EEW92949.1| tyrosine--tRNA ligase [Granulicatella elegans ATCC 700633]
          Length = 421

 Score =  239 bits (611), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 140/418 (33%), Positives = 222/418 (53%), Gaps = 23/418 (5%)

Query: 15  RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLM 74
           RG I+Q+++   L  L  +  V+ Y G D T  S+H GHL   M+L   Q  GH+P+ ++
Sbjct: 10  RGAINQMTDEEGLRQLTQEKAVSLYCGVDPTGDSMHIGHLIPFMILRRFQLAGHRPVIVI 69

Query: 75  GGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL-MLNNETWLC 133
           GG T  IGDPS R   R +   +++Q N+EK+               +A+ ++NN  W  
Sbjct: 70  GGATGSIGDPSGRTSERVLQTKEQVQHNVEKLTAQMKRLFLTSQEDQEAVRLVNNYDWTK 129

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDC 193
            +  +D LR+ G  F++N ML+ + V SRL  E  +SF EF+Y ILQ+ DF++L +  D 
Sbjct: 130 ELSLLDFLRDYGKHFNLNTMLAKDVVASRL--EVGISFTEFSYQILQSIDFLQLFRKEDV 187

Query: 194 RLQMGGSDQWGNIICGIDLGERLK--TPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
           ++Q+GG+DQWGNI  G++L  +++    + + LT PL+  + GTK GK+  GA+WL+ E 
Sbjct: 188 QVQIGGADQWGNITAGLELIRKVEGAEARAYGLTIPLMLKSDGTKFGKSAGGAVWLDSEK 247

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN--EAKKIIATEITTM 309
           T+PY F+Q+W N DD DV+ + K  T L   EI+ +     +E +  +A+K +A E+T  
Sbjct: 248 TTPYEFYQFWLNQDDRDVIKYIKYFTFLEKEEIEALEVSVQEEPHKRQAQKRLAEEVTRF 307

Query: 310 VHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIVKA 359
           VHG    + A       F   +            ++MPT    K E      L T +V  
Sbjct: 308 VHGEAALQDALKITNALFTGDVQQLNADEIEQGFKNMPTFESEKVE----QNLATWLVDL 363

Query: 360 GFATSTNEARRHLKSNAIKINNSIISN-EKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           G   S  ++R  +++ AI IN   I++ E +    Q F+    + +  GKK + +  L
Sbjct: 364 GIEPSRRQSREDIQNGAISINGEKITDLEHVWAPEQSFEGR-FVLVRRGKKKYFLVKL 420


>gi|118587440|ref|ZP_01544865.1| tyrosyl-tRNA synthetase [Oenococcus oeni ATCC BAA-1163]
 gi|118432090|gb|EAV38831.1| tyrosyl-tRNA synthetase [Oenococcus oeni ATCC BAA-1163]
          Length = 439

 Score =  239 bits (611), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 148/395 (37%), Positives = 215/395 (54%), Gaps = 25/395 (6%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D +  L  RG I Q ++   L  L     ++ Y+G D TA S+H G+L  L +L   Q  
Sbjct: 24  DIIEDLKWRGSIKQTTDESGLANLLKHKKISLYVGVDPTAKSIHIGNLIPLTILKRFQNA 83

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+P+ ++GGGT +IGDPS +   R+++      EN+ +I    +       GK    ++
Sbjct: 84  GHRPVIVVGGGTGMIGDPSGKASERKLLPKDVFDENVSRITKQMTRLF----GKDGFEIV 139

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  +  I  LR+ G  FS+N ML  + V SRL  +  +SF EF Y ILQA DF  
Sbjct: 140 NNYDWLSKLDLISFLRDYGKLFSINVMLKRDVVASRL--QAGISFTEFTYQILQAIDFYT 197

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSGA 244
           L K    +LQ+GG+DQ+GNI  G++L  +L  P  + F LT PLL  + GTK GK+  GA
Sbjct: 198 LFKEKAVQLQVGGADQYGNISSGVELIHKLVGPDTEAFGLTVPLLLKSDGTKFGKSAGGA 257

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA-KLQGK-EINEAKKII 302
           IWL+ E  SPY F+Q++ N  DADVV   K  T L   EI+ +A K++ + E  EA++ +
Sbjct: 258 IWLDPEFLSPYEFYQFFYNQTDADVVKLLKIFTFLNREEIEELADKVKNEPEKREAQRRL 317

Query: 303 ATEITTMVHGR---EEAEKAA-------TAAMECFDMSIHSQHMPTISISKDEVSRGMGL 352
           A E+T  VHG+   EEAEK +          +    +++    +PTI ++  +      +
Sbjct: 318 AEEVTKFVHGQTAVEEAEKISRILFNGDVENLTVSQVAVAFSGVPTIEVADQKTD----V 373

Query: 353 LTLIVKAG-FATSTNEARRHLKSNAIKINNSIISN 386
           + L+VK      S  +AR  LK+ AI IN   ISN
Sbjct: 374 VELLVKDKVIEKSRRQAREDLKNGAITINGEKISN 408


>gi|288926857|ref|ZP_06420764.1| tyrosine--tRNA ligase [Prevotella buccae D17]
 gi|288336382|gb|EFC74761.1| tyrosine--tRNA ligase [Prevotella buccae D17]
          Length = 432

 Score =  239 bits (610), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 144/428 (33%), Positives = 225/428 (52%), Gaps = 23/428 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG + QI    E     ++ +V+AY+G D TA SLH GHL  +M+L  LQ+ 
Sbjct: 3   NFVEELKWRGMLAQIMPGTE--EYLNEHLVSAYLGTDPTADSLHIGHLCGIMMLRHLQRC 60

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD-ALM 125
           GHKP  L+GG T +IGDPS + + R ++ S+ +  N E IK   + F+ + + + + A M
Sbjct: 61  GHKPYLLVGGATGMIGDPSGKSQERNLLDSETLYHNQEAIKKQAAKFLDFDSDEPNKAEM 120

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQS--LSFLEFNYMILQAYD 183
           +NN  W+    ++D  RE+G   +VN M++ +SV+ RL  E S  LSF EF Y +LQ YD
Sbjct: 121 VNNYDWMKDFTFLDFAREVGKHITVNYMMAKDSVKKRLNGEASDGLSFTEFTYQLLQGYD 180

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERL--KTPKLFALTSPLLTTASGTKMGKTL 241
           F+   ++Y  RLQ+GG+DQWGN+  G +L  R      + F LT PL+T A G K GKT 
Sbjct: 181 FLYQYQHYGVRLQLGGNDQWGNMTTGTELIRRTLGADAEAFCLTCPLITKADGKKFGKTE 240

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEA--K 299
           SG +WL++  T+PY F+Q+W N+ D D   + K  T+L    I+ + +   ++      +
Sbjct: 241 SGNVWLDRNRTTPYAFYQFWLNVSDDDAERYIKIFTSLERDVIEALIEEHRQDPGRRVLQ 300

Query: 300 KIIATEITTMVHGREEAEKAATAAMECF------------DMSIHSQHMPTISISKDEVS 347
           K +A E+TTMVH RE+ + A  A+   F            + +++           D+  
Sbjct: 301 KRLAEEVTTMVHSREDLDMAIAASNILFGKATKDSLAQLDEATLNDVFADVPHYDLDKSL 360

Query: 348 RGMGLLTLIVKAGFA--TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLS 405
            G   + L    G     S  E R+ +K   + +N   ++     I   D      + + 
Sbjct: 361 LGQTAVDLFCSEGMDIFPSKGEMRKLVKGGGVSLNKEKLAAFDRPITADDLIDGKYLLVQ 420

Query: 406 FGKKNHII 413
            GKKN+ +
Sbjct: 421 RGKKNYYL 428


>gi|259501971|ref|ZP_05744873.1| tyrosine-tRNA ligase [Lactobacillus antri DSM 16041]
 gi|259170030|gb|EEW54525.1| tyrosine-tRNA ligase [Lactobacillus antri DSM 16041]
          Length = 416

 Score =  239 bits (609), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 148/419 (35%), Positives = 226/419 (53%), Gaps = 24/419 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I+Q ++   L  L     +  Y G D T  SLH GHL   M+L   Q  GH P+
Sbjct: 7   LQWRGAINQTTDLDALKELTENKKIALYCGTDPTGDSLHIGHLIPFMILKRFQLAGHHPV 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            ++GGGT  IGDPS R   R +    ++  N    +   ++ +K   G  +  ++NN  W
Sbjct: 67  IIIGGGTGAIGDPSGRKSERTLQTMDQVHHN----EAALTAQMKKLFGTENFTIVNNYDW 122

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L  I  +D LR+ G  F++N ML+ E V SRL  +  +SF EF Y ILQ+ DF+ L ++ 
Sbjct: 123 LSQISLLDFLRDYGKLFNINTMLNKEVVASRL--DAGISFTEFTYQILQSVDFLHLYRHN 180

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLK--TPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
           D +LQ+GGSDQWGNI  GIDL  +++    K++ LT PL+  A GTK GKT  GAIWL+ 
Sbjct: 181 DVQLQIGGSDQWGNITAGIDLIHKVEGSETKVYGLTIPLMLKADGTKFGKTAGGAIWLDP 240

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIATEIT 307
           E TSPY F+Q+W N DD DVV + K  T L   EID +A+   KE    EA++ +A E+T
Sbjct: 241 EKTSPYEFYQFWINQDDRDVVKYLKYFTFLSKEEIDDLAEKVEKEPWKREAQRRLAEEVT 300

Query: 308 TMVHGREEAEKAATAAMECF-----DMSIHS-----QHMPTISISKDEVSRGMGLLTLIV 357
             VHG +  E+A   +   F     D+S+       ++MP++ +     ++   ++  + 
Sbjct: 301 KFVHGEQAVEEAQRISKALFSGDVADLSVAEIEQGFKNMPSVDVD----NQKENIVVWLT 356

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             G   S  +AR+ + + AI+IN   +++   ++          + +  GKK++ +  +
Sbjct: 357 DNGMEPSRRQARQDVSNGAIRINGEKVTDVDAEVDPSTHFDGKFVIVRRGKKHYFLARV 415


>gi|315607059|ref|ZP_07882063.1| tyrosine--tRNA ligase [Prevotella buccae ATCC 33574]
 gi|315251113|gb|EFU31098.1| tyrosine--tRNA ligase [Prevotella buccae ATCC 33574]
          Length = 433

 Score =  239 bits (609), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 128/324 (39%), Positives = 193/324 (59%), Gaps = 9/324 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG + QI    E     ++ +V+AY+G D TA SLH GHL  +M+L  LQ+ 
Sbjct: 4   NFVEELKWRGMLAQIMPGTE--EYLNEHLVSAYLGTDPTADSLHIGHLCGIMMLRHLQRC 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD-ALM 125
           GHKP  L+GG T +IGDPS + + R ++ S+ +  N E IK   + F+ + + + + A M
Sbjct: 62  GHKPYLLVGGATGMIGDPSGKSQERNLLDSETLYHNQEAIKKQAAKFLDFDSDEPNKAEM 121

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQS--LSFLEFNYMILQAYD 183
           +NN  W+    ++D  RE+G   +VN M++ +SV+ RL  E S  LSF EF Y +LQ YD
Sbjct: 122 VNNYDWMKDFTFLDFAREVGKHITVNYMMAKDSVKKRLNGEASDGLSFTEFTYQLLQGYD 181

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERL--KTPKLFALTSPLLTTASGTKMGKTL 241
           F+   ++Y  RLQ+GG+DQWGN+  G +L  R      + F LT PL+T A G K GKT 
Sbjct: 182 FLYQYQHYGVRLQLGGNDQWGNMTTGTELIRRTLGADAEAFCLTCPLITKADGKKFGKTE 241

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEA--K 299
           SG +WL++  T+PY F+Q+W N+ D D   + K  T+L    I+ + +   ++      +
Sbjct: 242 SGNVWLDRNRTTPYAFYQFWLNVSDDDAERYIKIFTSLERDVIEALIEEHRQDPGRRVLQ 301

Query: 300 KIIATEITTMVHGREEAEKAATAA 323
           K +A E+TTMVH RE+ + A  A+
Sbjct: 302 KRLAEEVTTMVHSREDLDMAIAAS 325


>gi|293977785|ref|YP_003543215.1| tyrosyl-tRNA synthetase [Candidatus Sulcia muelleri DMIN]
 gi|292667716|gb|ADE35351.1| tyrosyl-tRNA synthetase [Candidatus Sulcia muelleri DMIN]
          Length = 423

 Score =  239 bits (609), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 147/419 (35%), Positives = 230/419 (54%), Gaps = 22/419 (5%)

Query: 15  RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLM 74
           RG IH  +   ++       ++T Y G+D T  SLH G+L  +++L   QK+G+  IS++
Sbjct: 11  RGLIHDTTYSEQI----KNEIITLYTGFDPTYKSLHIGNLVAIIMLIHFQKSGNNIISVI 66

Query: 75  GGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCS 134
           GGGT +IGDPS ++  R + + + +  NI  +K   S +I +   K +  +LNN  WL  
Sbjct: 67  GGGTGMIGDPSGKNCERILKKKELLYNNIFYLKKQLSLYIDFNYPKNE--ILNNYEWLKK 124

Query: 135 IKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCR 194
             +I+  R+IG +F++N ML+ +S++ R+    S+SF EF Y +LQAYDF+ L K  +C 
Sbjct: 125 KLFIEFARDIGKYFTINYMLTKDSIKRRISNNNSISFTEFTYQLLQAYDFIYLYKEKNCS 184

Query: 195 LQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA-IWLNKEMTS 253
           LQ+GGSDQWGNI  GI+L  +    K+  LT PL+T   G+K GKT +G  IW++  +TS
Sbjct: 185 LQIGGSDQWGNITSGIELIRKKLGVKVNGLTFPLITKLDGSKFGKTENGENIWIDPNLTS 244

Query: 254 PYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE--INEAKKIIATEITTMVH 311
           PY F+Q+W NI D     + K  T L   EI  +      +  +   +K +A+EIT  +H
Sbjct: 245 PYEFYQFWINISDEQAKKYIKIYTFLKKEEIKEIIFYHENDPKLKLIQKKLASEITIFIH 304

Query: 312 GREEAEKAATAAMECFDM-----SIHSQHMPTI--SISKDEV----SRGMGLLTLIV-KA 359
           G++  EK    +   F+       I+  ++  I  +I   ++    +  + ++ L+V K+
Sbjct: 305 GKKTFEKIKFISNILFNKKKIINEINKNYIIFIYKNIPHKKIYIYHNFNIPIIDLLVNKS 364

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLCG 418
            F  S  EA R LK N+I IN   I +EK  +   D  S   + L  GKKN  +  + G
Sbjct: 365 KFLKSKKEAIRQLKLNSIYINKKNI-DEKFILNKNDLISGTYVLLQKGKKNFFMIKIYG 422


>gi|16752679|ref|NP_444946.1| tyrosyl-tRNA synthetase [Chlamydophila pneumoniae AR39]
 gi|14195230|sp|Q9Z8I2|SYY_CHLPN RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|7189321|gb|AAF38242.1| tyrosyl-tRNA synthetase [Chlamydophila pneumoniae AR39]
          Length = 412

 Score =  239 bits (609), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 143/424 (33%), Positives = 221/424 (52%), Gaps = 31/424 (7%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           +L  L ER  +   +   E      +G + AY+G+D TA +LH GH   +  L  L   G
Sbjct: 4   WLQSLQERNILENFTAGLE----SVEGPIAAYLGFDPTAPALHIGHWIGICFLKRLAALG 59

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
             PI+L+GG T ++GDPS +   R ++++ E+ +N +KI        +Y  G T   ++N
Sbjct: 60  ITPIALVGGATGMVGDPSGKQSERSLLQTSEVFDNSQKITACLQ---RYLPGVT---LVN 113

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  I  ID LR+IG  F + +ML  ++++ R+  ++ +S+ EF+Y+ILQ+YDF  L
Sbjct: 114 NADWLQEISLIDFLRDIGKHFRLGQMLVKDTIKQRVHSDEGISYTEFSYLILQSYDFYHL 173

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            KNY   LQ GGSDQWGNI  GID   R    + + LT PLLT A G K+GKT SG +WL
Sbjct: 174 FKNYGTILQCGGSDQWGNITSGIDFIRRKGLGQAYGLTYPLLTNAQGKKIGKTESGTVWL 233

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           + ++TSP+  +QY   + D  +   A+ LT L   EI  + +    +    K+ +A +I 
Sbjct: 234 DSDLTSPFELYQYLLRLPDDTIPKIARTLTLLSNEEIQDIDRRVQTDPVAVKEFVAQDIL 293

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTI---------------SISKDEVSRGMGL 352
           + +HG    E+A +        S+H  ++ ++               S+ K EV  G   
Sbjct: 294 SAIHGDLGLEEALSVT-----RSMHPGNLSSLSEKDFHELFAGGMGASLDKSEV-LGKRW 347

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           L L +  G   S  E RR ++   + INN  I+NE    + QD      + L+ GKK  +
Sbjct: 348 LDLFLVLGLCKSKGEIRRLIEQKGVYINNVPIANEHSVCEEQDICYGHYVLLAQGKKRKL 407

Query: 413 ICHL 416
           + +L
Sbjct: 408 VLYL 411


>gi|33241703|ref|NP_876644.1| tyrosyl-tRNA synthetase [Chlamydophila pneumoniae TW-183]
 gi|33236212|gb|AAP98301.1| tyrosyl-tRNA synthetase [Chlamydophila pneumoniae TW-183]
          Length = 422

 Score =  239 bits (609), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 143/424 (33%), Positives = 221/424 (52%), Gaps = 31/424 (7%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           +L  L ER  +   +   E      +G + AY+G+D TA +LH GH   +  L  L   G
Sbjct: 14  WLQSLQERNILENFTAGLE----SVEGPIAAYLGFDPTAPALHIGHWIGICFLKRLAALG 69

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
             PI+L+GG T ++GDPS +   R ++++ E+ +N +KI        +Y  G T   ++N
Sbjct: 70  ITPIALVGGATGMVGDPSGKQSERSLLQTSEVFDNSQKITACLQ---RYLPGVT---LVN 123

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  I  ID LR+IG  F + +ML  ++++ R+  ++ +S+ EF+Y+ILQ+YDF  L
Sbjct: 124 NADWLQEISLIDFLRDIGKHFRLGQMLVKDTIKQRVHSDEGISYTEFSYLILQSYDFYHL 183

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            KNY   LQ GGSDQWGNI  GID   R    + + LT PLLT A G K+GKT SG +WL
Sbjct: 184 FKNYGTILQCGGSDQWGNITSGIDFIRRKGLGQAYGLTYPLLTNAQGKKIGKTESGTVWL 243

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           + ++TSP+  +QY   + D  +   A+ LT L   EI  + +    +    K+ +A +I 
Sbjct: 244 DSDLTSPFELYQYLLRLPDDTIPKIARTLTLLSNEEIQDIDRRVQTDPVAVKEFVAQDIL 303

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTI---------------SISKDEVSRGMGL 352
           + +HG    E+A +        S+H  ++ ++               S+ K EV  G   
Sbjct: 304 SAIHGDLGLEEALSVT-----RSMHPGNLSSLSEKDFHELFAGGMGASLDKSEV-LGKRW 357

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           L L +  G   S  E RR ++   + INN  I+NE    + QD      + L+ GKK  +
Sbjct: 358 LDLFLVLGLCKSKGEIRRLIEQKGVYINNVPIANEHSVCEEQDICYGHYVLLAQGKKRKL 417

Query: 413 ICHL 416
           + +L
Sbjct: 418 VLYL 421


>gi|255029464|ref|ZP_05301415.1| tyrosyl-tRNA synthetase [Listeria monocytogenes LO28]
          Length = 285

 Score =  239 bits (609), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 126/280 (45%), Positives = 168/280 (60%), Gaps = 5/280 (1%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I+Q ++   L     +  ++ Y G D +  S+H GHL   M+L   Q  GH+PI
Sbjct: 7   LEWRGAIYQQTDEEGLRKWVEEKQISLYCGIDPSGDSMHIGHLIPFMILRRFQNAGHRPI 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+GG T  IGDPS + E R++   ++I +N+E ++        +  G + A M+NN  W
Sbjct: 67  ILVGGATGTIGDPSGKKEERKLQSMEQISKNVESLRVQLGKIFDF-EGNSAASMVNNYDW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
              +  +D LR+ G  F+VN MLS + V SRL  E  +SF EF Y ILQA DF  L +  
Sbjct: 126 TKDVSILDFLRDYGKEFNVNTMLSKDIVASRL--EVGISFTEFAYQILQAMDFNHLYEFN 183

Query: 192 DCRLQMGGSDQWGNIICGIDL--GERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
           DCRLQ+GGSDQWGNI  G+DL   ++ +  K F LT PLLT A GTK GK+  GAIWLN 
Sbjct: 184 DCRLQIGGSDQWGNITAGLDLIRKKQGENAKAFGLTIPLLTKADGTKFGKSEGGAIWLNP 243

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK 289
           E T+PY F+Q+W N DD DVV + K  T L  +EID +AK
Sbjct: 244 EKTTPYEFYQFWINTDDRDVVKYLKYFTFLTEAEIDELAK 283


>gi|227517595|ref|ZP_03947644.1| tyrosine--tRNA ligase [Enterococcus faecalis TX0104]
 gi|227554748|ref|ZP_03984795.1| tyrosine--tRNA ligase [Enterococcus faecalis HH22]
 gi|229546460|ref|ZP_04435185.1| tyrosine--tRNA ligase [Enterococcus faecalis TX1322]
 gi|229548575|ref|ZP_04437300.1| tyrosine--tRNA ligase [Enterococcus faecalis ATCC 29200]
 gi|293384954|ref|ZP_06630789.1| tyrosine--tRNA ligase [Enterococcus faecalis R712]
 gi|293389225|ref|ZP_06633687.1| tyrosine--tRNA ligase [Enterococcus faecalis S613]
 gi|307268205|ref|ZP_07549590.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX4248]
 gi|307272446|ref|ZP_07553700.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0855]
 gi|307277081|ref|ZP_07558186.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX2134]
 gi|307278276|ref|ZP_07559355.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0860]
 gi|307289672|ref|ZP_07569616.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0109]
 gi|307289902|ref|ZP_07569832.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0411]
 gi|312900223|ref|ZP_07759535.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0470]
 gi|312904348|ref|ZP_07763510.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0635]
 gi|312905944|ref|ZP_07764957.1| tyrosyl-tRNA synthetase [Enterococcus faecalis DAPTO 512]
 gi|312909290|ref|ZP_07768146.1| tyrosyl-tRNA synthetase [Enterococcus faecalis DAPTO 516]
 gi|312953010|ref|ZP_07771863.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0102]
 gi|21309883|gb|AAM46083.1| tyrosyl-t-RNA synthetase [Enterococcus faecalis]
 gi|227074994|gb|EEI12957.1| tyrosine--tRNA ligase [Enterococcus faecalis TX0104]
 gi|227176119|gb|EEI57091.1| tyrosine--tRNA ligase [Enterococcus faecalis HH22]
 gi|229306310|gb|EEN72306.1| tyrosine--tRNA ligase [Enterococcus faecalis ATCC 29200]
 gi|229308433|gb|EEN74420.1| tyrosine--tRNA ligase [Enterococcus faecalis TX1322]
 gi|291077772|gb|EFE15136.1| tyrosine--tRNA ligase [Enterococcus faecalis R712]
 gi|291081389|gb|EFE18352.1| tyrosine--tRNA ligase [Enterococcus faecalis S613]
 gi|306499043|gb|EFM68531.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0411]
 gi|306499486|gb|EFM68859.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0109]
 gi|306505027|gb|EFM74218.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0860]
 gi|306506252|gb|EFM75417.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX2134]
 gi|306510908|gb|EFM79924.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0855]
 gi|306515474|gb|EFM84004.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX4248]
 gi|310627939|gb|EFQ11222.1| tyrosyl-tRNA synthetase [Enterococcus faecalis DAPTO 512]
 gi|310629039|gb|EFQ12322.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0102]
 gi|310632444|gb|EFQ15727.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0635]
 gi|311290314|gb|EFQ68870.1| tyrosyl-tRNA synthetase [Enterococcus faecalis DAPTO 516]
 gi|311292584|gb|EFQ71140.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0470]
 gi|315025584|gb|EFT37516.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX2137]
 gi|315030556|gb|EFT42488.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX4000]
 gi|315031334|gb|EFT43266.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0017]
 gi|315034437|gb|EFT46369.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0027]
 gi|315144525|gb|EFT88541.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX2141]
 gi|315146919|gb|EFT90935.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX4244]
 gi|315149371|gb|EFT93387.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0012]
 gi|315153921|gb|EFT97937.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0031]
 gi|315156719|gb|EFU00736.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0043]
 gi|315159750|gb|EFU03767.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0312]
 gi|315162722|gb|EFU06739.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0645]
 gi|315166205|gb|EFU10222.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX1302]
 gi|315166808|gb|EFU10825.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX1341]
 gi|315170800|gb|EFU14817.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX1342]
 gi|315173858|gb|EFU17875.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX1346]
 gi|315576124|gb|EFU88315.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0309B]
 gi|315578789|gb|EFU90980.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0630]
 gi|315581554|gb|EFU93745.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0309A]
 gi|327534219|gb|AEA93053.1| tyrosine--tRNA ligase [Enterococcus faecalis OG1RF]
 gi|329576903|gb|EGG58386.1| tyrosine--tRNA ligase [Enterococcus faecalis TX1467]
          Length = 423

 Score =  239 bits (609), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 159/431 (36%), Positives = 234/431 (54%), Gaps = 30/431 (6%)

Query: 5   KSDFLSILSE---RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
           + D ++I+ E   R  I+Q +N   L  L     ++ Y G D T  S+H GHL   M++ 
Sbjct: 2   EGDNMNIIDELAWRDAINQQTNEEGLRELTENTSISLYCGVDPTGDSMHIGHLIPFMMMK 61

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK- 120
             Q  GH P  L+GGGT  IGDPS R   R +   + +Q N++ +    S+ +K   GK 
Sbjct: 62  RFQLAGHHPYILIGGGTGTIGDPSGRTTERVLQTMEAVQHNVDSL----SNQMKKLFGKD 117

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
            +  M+NN  WL  +  +D LR+ G  F+VN ML+ + V SRL  E  +SF EF Y ILQ
Sbjct: 118 AEVTMVNNYDWLSELSLLDFLRDYGKNFNVNTMLAKDIVASRL--ESGISFTEFTYQILQ 175

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMG 238
           + DF  L K ++ +LQ+GG+DQWGNI  G+DL  + + P  K+F LT PL+  A GTK G
Sbjct: 176 SIDFYTLHKKHNIQLQIGGADQWGNITAGLDLIRKKEGPEAKVFGLTIPLMLKADGTKFG 235

Query: 239 KTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN-- 296
           KT  GAIWL+ + TSP+ F+Q+W N DD DV+ + K  T L   EID +A+   KE    
Sbjct: 236 KTAGGAIWLDPKKTSPFEFYQFWLNQDDRDVIKYLKFFTFLDKEEIDALAEKVEKEPGKR 295

Query: 297 EAKKIIATEITTMVH---GREEAEKAATAAM--ECFDMSIHS-----QHMPTISISKDEV 346
           EA++ +A E+T  VH     EEA+K + A       D++I       +H+PT+ I+KD  
Sbjct: 296 EAQRRLAEEVTRFVHDDAALEEAQKISEALFSGNIKDLTIEEIEQGLEHVPTVEITKD-- 353

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK-LQDFDSTGNIKLS 405
                ++  +V      S  +AR  +   AI IN   +++    +   Q FD    + + 
Sbjct: 354 --AKNIVDWLVDTEIEPSKRQAREDVSGGAISINGDRVTDLDFAVDPTQHFDGKF-VVVR 410

Query: 406 FGKKNHIICHL 416
            GKKN+ +  +
Sbjct: 411 KGKKNYFLAKV 421


>gi|269303236|gb|ACZ33336.1| tyrosyl-tRNA synthetase [Chlamydophila pneumoniae LPCoLN]
          Length = 412

 Score =  239 bits (609), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 138/399 (34%), Positives = 213/399 (53%), Gaps = 27/399 (6%)

Query: 33  QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRR 92
           +G + AY+G+D TA +LH GH   +  L  L   G  PI+L+GG T ++GDPS +   R 
Sbjct: 25  EGPIAAYLGFDPTAPALHIGHWIGICFLKRLAALGITPIALVGGATGMVGDPSGKQSERS 84

Query: 93  MMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNR 152
           ++++ E+ +N +KI        +Y  G T   ++NN  WL  I  ID LR+IG  F + +
Sbjct: 85  LLQTSEVFDNSQKITACLQ---RYLPGVT---LVNNADWLQEISLIDFLRDIGKHFRLGQ 138

Query: 153 MLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL 212
           ML+ ++++ R+  ++ +S+ EF+Y+ILQ+YDF  L KNY   LQ GGSDQWGNI  GID 
Sbjct: 139 MLAKDTIKQRVHSDEGISYTEFSYLILQSYDFYHLFKNYGTILQCGGSDQWGNITSGIDF 198

Query: 213 GERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSF 272
             R    + + LT PLLT A G K+GKT SG +WL+ ++TSP+  +QY   + D  +   
Sbjct: 199 IRRKGLGQAYGLTYPLLTNAQGKKIGKTESGTVWLDSDLTSPFELYQYLLRLPDDTIPKI 258

Query: 273 AKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIH 332
           A+ LT L   EI  + +    +    K+ +A +I   +HG    E+A +        S+H
Sbjct: 259 ARTLTLLSNEEIQDIDRRVQTDPVAVKEFVAQDILRAIHGDLGLEEALSVT-----RSMH 313

Query: 333 SQHMPTI---------------SISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAI 377
             ++ ++               S+ K EV  G   L L +  G   S  E RR ++   +
Sbjct: 314 PGNLSSLSEKDFHELFAGGMGASLDKSEV-LGKRWLDLFLVLGLCKSKGEIRRLIEQKGV 372

Query: 378 KINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            INN  I+NE    + QD      + L+ GKK  ++ +L
Sbjct: 373 YINNVPIANEHSVCEEQDICYGHYVLLAQGKKRKLVLYL 411


>gi|161833674|ref|YP_001597870.1| tyrosyl-tRNA synthetase [Candidatus Sulcia muelleri GWSS]
 gi|152206164|gb|ABS30474.1| tyrosyl-tRNA synthetase [Candidatus Sulcia muelleri GWSS]
          Length = 433

 Score =  238 bits (608), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 149/432 (34%), Positives = 234/432 (54%), Gaps = 22/432 (5%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  F  + +  L  RG IH  +   ++       ++T Y G+D T  SLH G+L  +++L
Sbjct: 1   MNNFNLNLIQELLWRGLIHDTTYSEQI----KNEIITLYTGFDPTYKSLHIGNLVAIIML 56

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              QK+G+  IS++GGGT +IGDPS ++  R + + + +  NI  +K   S +I +   K
Sbjct: 57  IHFQKSGNNIISVIGGGTGMIGDPSGKNCERILKKKELLYNNIFYLKKQLSLYIDFNYPK 116

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
            +  +LNN  WL    +I+  R+IG +F++N ML+ +S++ R+    S+SF EF Y +LQ
Sbjct: 117 NE--ILNNYEWLKKKLFIEFARDIGKYFTINYMLTKDSIKRRISNNNSISFTEFTYQLLQ 174

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDF+ L K  +C LQ+GGSDQWGNI  GI+L  +    K+  LT PL+T   G+K GKT
Sbjct: 175 AYDFIYLYKEKNCSLQIGGSDQWGNITSGIELIRKKLGVKVNGLTFPLITKLDGSKFGKT 234

Query: 241 LSGA-IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE--INE 297
            +G  IW++  +TSPY F+Q+W NI D     + K  T L   EI  +      +  +  
Sbjct: 235 ENGENIWIDPNLTSPYEFYQFWINISDEQAKKYIKIYTFLKKEEIKEIIFYHENDPKLKL 294

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDM-----SIHSQHMPTI--SISKDEV---- 346
            +K +A+EIT  +HG++  EK    +   F+       I+  ++  I  +I   ++    
Sbjct: 295 IQKKLASEITIFIHGKKTFEKIKFISNILFNKKKIINEINKNYIIFIYKNIPHKKIYIYH 354

Query: 347 SRGMGLLTLIV-KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLS 405
           +  + ++ L+V K+ F  S  EA R LK N+I IN   I +EK  +   D  S   + L 
Sbjct: 355 NFNIPIIDLLVNKSKFLKSKKEAIRQLKLNSIYINKKNI-DEKFILNKNDLISGTYVLLQ 413

Query: 406 FGKKNHIICHLC 417
            GKKN  +  + 
Sbjct: 414 KGKKNFFMIKIV 425


>gi|15835894|ref|NP_300418.1| tyrosyl-tRNA synthetase [Chlamydophila pneumoniae J138]
 gi|8978733|dbj|BAA98569.1| tyrosyl tRNA synthetase [Chlamydophila pneumoniae J138]
          Length = 422

 Score =  238 bits (608), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 143/426 (33%), Positives = 223/426 (52%), Gaps = 35/426 (8%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           +L  L ER  +   +   E      +G + AY+G+D TA +LH GH   +  L  L   G
Sbjct: 14  WLQSLQERNILENFTAGLE----SVEGPIAAYLGFDPTAPALHIGHWIGICFLKRLAALG 69

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
             PI+L+GG T ++GDPS +   R ++++ E+ +N +KI        +Y  G T   ++N
Sbjct: 70  ITPIALVGGATGMVGDPSGKQSERSLLQTSEVFDNSQKITACLQ---RYLPGVT---LVN 123

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  I  ID LR+IG  F + +ML  ++++ R+  ++ +S+ EF+Y+ILQ+YDF  L
Sbjct: 124 NADWLQEISLIDFLRDIGKHFRLGQMLVKDTIKQRVHSDEGISYTEFSYLILQSYDFYHL 183

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            KNY   LQ GGSDQWGNI  GID   R    + + LT PLLT A G K+GKT SG +WL
Sbjct: 184 FKNYGTILQCGGSDQWGNITSGIDFIRRKGLGQAYGLTYPLLTNAQGKKIGKTESGTVWL 243

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           + ++TSP+  +QY   + D  +   A+ LT L   EI  + +    +    K+ +A +I 
Sbjct: 244 DSDLTSPFELYQYLLRLPDDTIPKIARTLTLLSNEEIQDIDRRVQTDPVAVKEFVAQDIL 303

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTI---------------SISKDEV--SRGM 350
           + +HG    E+A +        S+H  ++ ++               S+ K EV   R +
Sbjct: 304 SAIHGDLGLEEALSVT-----RSMHPGNLSSLSEKDFHELFAGGMGASLDKSEVLGKRWL 358

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
           GL  ++   G   S  E RR ++   + INN  I+NE    + QD      + L+ GKK 
Sbjct: 359 GLFLVL---GLCKSKGEIRRLIEQKGVYINNVPIANEHSVCEEQDICYGHYVLLAQGKKR 415

Query: 411 HIICHL 416
            ++ +L
Sbjct: 416 KLVLYL 421


>gi|241888646|ref|ZP_04775953.1| tyrosyl-tRNA synthetase [Gemella haemolysans ATCC 10379]
 gi|241864669|gb|EER69044.1| tyrosyl-tRNA synthetase [Gemella haemolysans ATCC 10379]
          Length = 417

 Score =  238 bits (608), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 135/422 (31%), Positives = 227/422 (53%), Gaps = 22/422 (5%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S  L  L  R  ++Q ++   +  L  +  V+ Y G D T +SLH GHL   + L   Q+
Sbjct: 2   SKLLEDLKYRDLVYQQTDEEGIKELLEKESVSIYCGTDPTGNSLHIGHLLPFLTLKRFQQ 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP+ L+GGGT IIGDPS R E R++   + I++N  +++    +  +   G  +   
Sbjct: 62  HGHKPVILVGGGTGIIGDPSGRSEERQLQSLEVIEDNARRLEAQLRNIFR---GDDNIEF 118

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  WL  +  I+ LR+ G   ++N +L+ +SV SRL  +  LSF EF+Y ILQ  D+ 
Sbjct: 119 VNNIDWLGKLSMIEFLRDYGKLVNINYLLAKDSVASRL--DNGLSFTEFSYTILQGIDYA 176

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLLTTASGTKMGKTLSGA 244
            L ++++ +LQ+GGSDQWGNI  G+++  +L+   + +  T PL+  + GTK GK+  GA
Sbjct: 177 YLNEHHNVKLQIGGSDQWGNITTGLEIMRKLRGDVEAYGFTIPLMLKSDGTKFGKSTGGA 236

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE--INEAKKII 302
           +WL+ E T+PY F+Q+W N  D +VV   K+ T L   +I+ + +   KE  +  A+K +
Sbjct: 237 VWLDPEQTTPYEFYQFWFNTADTEVVPALKKFTFLEKEQIEALRESSEKEPHLRLAQKAL 296

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGL 352
           A E+  +VHG +  E A       F  +I            + MP   + K E +    +
Sbjct: 297 AEEMVKIVHGEKALESALNITKALFSGNIKELTHDELKAAVKGMPKSELEKKEYN----I 352

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           +  +V++    S  +AR  + + A+ +N   +++ +  ++ +D    G   L  GKK ++
Sbjct: 353 VDFLVESNLVQSKRQAREDVNNGAVYVNGDKVTDLEYVVEGKDRLEDGFTVLRRGKKKYL 412

Query: 413 IC 414
           + 
Sbjct: 413 LV 414


>gi|288800271|ref|ZP_06405729.1| tyrosine--tRNA ligase [Prevotella sp. oral taxon 299 str. F0039]
 gi|288332484|gb|EFC70964.1| tyrosine--tRNA ligase [Prevotella sp. oral taxon 299 str. F0039]
          Length = 433

 Score =  238 bits (608), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 145/428 (33%), Positives = 229/428 (53%), Gaps = 23/428 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG + Q+  P   + L  + V +AY+G D TA SLH GHL  +M+L  LQ+ 
Sbjct: 4   NFVEELKWRGMLAQMM-PGTEEFLMKEKV-SAYLGTDPTADSLHIGHLAGIMMLRHLQRC 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK-TDALM 125
           GHKP  L+GG T +IGDPS + + R ++ ++ +  N E IK   + F+ +   + T A+M
Sbjct: 62  GHKPYILVGGATGMIGDPSGKSQERNLLDAETLYHNQECIKKQVAKFLDFNASEDTAAVM 121

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQAYD 183
           +NN  W+    ++D  R +G   +VN M++ +SV+ RL  E    LSF EF Y +LQ YD
Sbjct: 122 VNNYDWMKDFTFLDFARLVGKHITVNYMMAKDSVKKRLNGEARDGLSFTEFTYQLLQGYD 181

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERL--KTPKLFALTSPLLTTASGTKMGKTL 241
           F+ L +  + +LQ+GG+DQWGN+  G +L  R      + FALT PL+T A GTK GKT 
Sbjct: 182 FLHLYRTNNVKLQLGGNDQWGNMTTGTELIRRTLGNDAEAFALTCPLITKADGTKFGKTE 241

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAK 299
           SG IWL++  T+PY F+Q+W N+ D D V + K  T+L    I+ +     Q   +   +
Sbjct: 242 SGNIWLDRNRTTPYKFYQFWLNVSDDDAVKYIKIFTSLEKDVINALIAEHEQDPGMRVLQ 301

Query: 300 KIIATEITTMVHGREEAEKAATAAMECF------------DMSIHS--QHMPTISISKDE 345
           K +A E+T MVH +E+ + A  A+   F            D ++ S  + +P   +SK+ 
Sbjct: 302 KRLADELTVMVHSQEDLDLAKEASGILFGKGTKESLAKFDDATLLSIFEGVPQFKLSKEA 361

Query: 346 VSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLS 405
           + +    L    +     S  E R+ ++   + +N   +      I   D  +   + + 
Sbjct: 362 LGQPAVELFTSDEVKVFPSKGEMRKLVQGGGVSLNKEKLQAVDQVITTDDLLNGKYLLVQ 421

Query: 406 FGKKNHII 413
            GKKN+ +
Sbjct: 422 RGKKNYYL 429


>gi|29375234|ref|NP_814387.1| tyrosyl-tRNA synthetase [Enterococcus faecalis V583]
 gi|255971094|ref|ZP_05421680.1| tyrosyl-tRNA synthetase [Enterococcus faecalis T1]
 gi|255973706|ref|ZP_05424292.1| tyrosyl-tRNA synthetase [Enterococcus faecalis T2]
 gi|256617516|ref|ZP_05474362.1| tyrosyl-tRNA synthetase [Enterococcus faecalis ATCC 4200]
 gi|256761406|ref|ZP_05501986.1| tyrosyl-tRNA synthetase [Enterococcus faecalis T3]
 gi|256854506|ref|ZP_05559870.1| tyrosyl-t-RNA synthetase [Enterococcus faecalis T8]
 gi|256957502|ref|ZP_05561673.1| tyrosyl-tRNA synthetase [Enterococcus faecalis DS5]
 gi|256959767|ref|ZP_05563938.1| tyrosyl-tRNA synthetase [Enterococcus faecalis Merz96]
 gi|256964581|ref|ZP_05568752.1| tyrosyl-tRNA synthetase [Enterococcus faecalis HIP11704]
 gi|257077509|ref|ZP_05571870.1| tyrosyl-tRNA synthetase [Enterococcus faecalis JH1]
 gi|257080876|ref|ZP_05575237.1| tyrosyl-tRNA synthetase [Enterococcus faecalis E1Sol]
 gi|257083566|ref|ZP_05577927.1| tyrosyl-tRNA synthetase [Enterococcus faecalis Fly1]
 gi|257085990|ref|ZP_05580351.1| tyrosyl-tRNA synthetase [Enterococcus faecalis D6]
 gi|257089063|ref|ZP_05583424.1| tyrosyl-tRNA synthetase [Enterococcus faecalis CH188]
 gi|257415205|ref|ZP_05592199.1| tyrosyl-tRNA synthetase [Enterococcus faecalis AR01/DG]
 gi|257418251|ref|ZP_05595245.1| tyrosyl-tRNA synthetase [Enterococcus faecalis T11]
 gi|257420895|ref|ZP_05597885.1| tyrosyl-tRNA synthetase [Enterococcus faecalis X98]
 gi|294780714|ref|ZP_06746075.1| tyrosine--tRNA ligase [Enterococcus faecalis PC1.1]
 gi|300861931|ref|ZP_07108011.1| tyrosine--tRNA ligase [Enterococcus faecalis TUSoD Ef11]
 gi|81437350|sp|Q838D7|SYY1_ENTFA RecName: Full=Tyrosyl-tRNA synthetase 1; AltName:
           Full=Tyrosine--tRNA ligase 1; Short=TyrRS 1
 gi|29342693|gb|AAO80458.1| tyrosyl-tRNA synthetase [Enterococcus faecalis V583]
 gi|255962112|gb|EET94588.1| tyrosyl-tRNA synthetase [Enterococcus faecalis T1]
 gi|255966578|gb|EET97200.1| tyrosyl-tRNA synthetase [Enterococcus faecalis T2]
 gi|256597043|gb|EEU16219.1| tyrosyl-tRNA synthetase [Enterococcus faecalis ATCC 4200]
 gi|256682657|gb|EEU22352.1| tyrosyl-tRNA synthetase [Enterococcus faecalis T3]
 gi|256710066|gb|EEU25110.1| tyrosyl-t-RNA synthetase [Enterococcus faecalis T8]
 gi|256947998|gb|EEU64630.1| tyrosyl-tRNA synthetase [Enterococcus faecalis DS5]
 gi|256950263|gb|EEU66895.1| tyrosyl-tRNA synthetase [Enterococcus faecalis Merz96]
 gi|256955077|gb|EEU71709.1| tyrosyl-tRNA synthetase [Enterococcus faecalis HIP11704]
 gi|256985539|gb|EEU72841.1| tyrosyl-tRNA synthetase [Enterococcus faecalis JH1]
 gi|256988906|gb|EEU76208.1| tyrosyl-tRNA synthetase [Enterococcus faecalis E1Sol]
 gi|256991596|gb|EEU78898.1| tyrosyl-tRNA synthetase [Enterococcus faecalis Fly1]
 gi|256994020|gb|EEU81322.1| tyrosyl-tRNA synthetase [Enterococcus faecalis D6]
 gi|256997875|gb|EEU84395.1| tyrosyl-tRNA synthetase [Enterococcus faecalis CH188]
 gi|257157033|gb|EEU86993.1| tyrosyl-tRNA synthetase [Enterococcus faecalis ARO1/DG]
 gi|257160079|gb|EEU90039.1| tyrosyl-tRNA synthetase [Enterococcus faecalis T11]
 gi|257162719|gb|EEU92679.1| tyrosyl-tRNA synthetase [Enterococcus faecalis X98]
 gi|294452324|gb|EFG20765.1| tyrosine--tRNA ligase [Enterococcus faecalis PC1.1]
 gi|295114139|emb|CBL32776.1| tyrosyl-tRNA synthetase [Enterococcus sp. 7L76]
 gi|300848456|gb|EFK76213.1| tyrosine--tRNA ligase [Enterococcus faecalis TUSoD Ef11]
 gi|323479814|gb|ADX79253.1| tyrosyl-tRNA synthetase [Enterococcus faecalis 62]
          Length = 418

 Score =  238 bits (608), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 157/421 (37%), Positives = 229/421 (54%), Gaps = 27/421 (6%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L+ R  I+Q +N   L  L     ++ Y G D T  S+H GHL   M++   Q  GH P 
Sbjct: 7   LAWRDAINQQTNEEGLRELTENTSISLYCGVDPTGDSMHIGHLIPFMMMKRFQLAGHHPY 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK-TDALMLNNET 130
            L+GGGT  IGDPS R   R +   + +Q N++ +    S+ +K   GK  +  M+NN  
Sbjct: 67  ILIGGGTGTIGDPSGRTTERVLQTMEAVQHNVDSL----SNQMKKLFGKDAEVTMVNNYD 122

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           WL  +  +D LR+ G  F+VN ML+ + V SRL  E  +SF EF Y ILQ+ DF  L K 
Sbjct: 123 WLSELSLLDFLRDYGKNFNVNTMLAKDIVASRL--ESGISFTEFTYQILQSIDFYTLHKK 180

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSGAIWLN 248
           ++ +LQ+GG+DQWGNI  G+DL  + + P  K+F LT PL+  A GTK GKT  GAIWL+
Sbjct: 181 HNIQLQIGGADQWGNITAGLDLIRKKEGPEAKVFGLTIPLMLKADGTKFGKTAGGAIWLD 240

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIATEI 306
            + TSP+ F+Q+W N DD DV+ + K  T L   EID +A+   KE    EA++ +A E+
Sbjct: 241 PKKTSPFEFYQFWLNQDDRDVIKYLKFFTFLDKEEIDALAEKVEKEPGKREAQRRLAEEV 300

Query: 307 TTMVH---GREEAEKAATAAM--ECFDMSIHS-----QHMPTISISKDEVSRGMGLLTLI 356
           T  VH     EEA+K + A       D++I       +H+PT+ I+KD       ++  +
Sbjct: 301 TRFVHDDAALEEAQKISEALFSGNIKDLTIEEIEQGLEHVPTVEITKD----AKNIVDWL 356

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK-LQDFDSTGNIKLSFGKKNHIICH 415
           V      S  +AR  +   AI IN   +++    +   Q FD    + +  GKKN+ +  
Sbjct: 357 VDTEIEPSKRQAREDVSGGAISINGDRVTDLDFAVDPTQHFDGKF-VVVRKGKKNYFLAK 415

Query: 416 L 416
           +
Sbjct: 416 V 416


>gi|229817939|ref|ZP_04448221.1| hypothetical protein BIFANG_03226 [Bifidobacterium angulatum DSM
           20098]
 gi|229784543|gb|EEP20657.1| hypothetical protein BIFANG_03226 [Bifidobacterium angulatum DSM
           20098]
          Length = 440

 Score =  238 bits (608), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 141/420 (33%), Positives = 226/420 (53%), Gaps = 37/420 (8%)

Query: 5   KSDFLSILSE---RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
           ++ F S+L E   RG + Q ++   L    +   +T Y G+D TA+SLH G+L QL+ + 
Sbjct: 9   EAGFSSLLEELQWRGLVSQSTDRERLAQALNGEPITYYCGFDPTAASLHIGNLVQLINMR 68

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI----QENIEK-IKGIFSSFIKY 116
            LQ  GH PI+L+GG T +IGDP  R    R +  +++     E ++K I GI  +    
Sbjct: 69  HLQLAGHHPIALVGGATGLIGDP--RQSGERTLNPKDVVAGWAERLKKQIGGILDT---- 122

Query: 117 GTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNY 176
             G      ++N  W   +  ID LR++G  F +  ML+ ++V  RL  E+ +SF EF+Y
Sbjct: 123 -EGSNPVRFVSNYDWTAQMSVIDFLRDVGKNFRLGTMLAKDTVARRLNSEEGISFTEFSY 181

Query: 177 MILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTK 236
            +LQ  DF+ L   Y C L++GGSDQWGN+  G+DL  +++   +   TSP++T A G K
Sbjct: 182 QVLQGNDFLHLFDEYHCTLELGGSDQWGNLTSGLDLIHKVRGVDVNVFTSPIITDAQGKK 241

Query: 237 MGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN 296
            GK+   A+WL+  M SPY F+Q+W N  DA++ S  K  T LP SEI+R+  ++  + N
Sbjct: 242 FGKSEGNAVWLDATMLSPYKFYQFWINRPDAEMESLLKAFTFLPKSEIERL--IEESKTN 299

Query: 297 ----EAKKIIATEITTMVHGREEAEKAATAAMECFDM-----SIHSQHMPTI----SISK 343
               EA+K +A E+T+ VHG +  + A  A+   F       +I  Q + ++     ++ 
Sbjct: 300 PGAREAQKTLAWEVTSFVHGEQATQAAIDASTALFGRGGDLNAIDEQTLESVLDGFKVAG 359

Query: 344 D-------EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
           +       +   G  ++     AG   S +EARR +KS  + +NN  + +++  +   DF
Sbjct: 360 ENGEHVFPQSEAGARVIDAAQAAGLFKSGSEARRAIKSGGVYLNNVRVEDDEAVLGESDF 419


>gi|282880553|ref|ZP_06289260.1| tyrosine--tRNA ligase [Prevotella timonensis CRIS 5C-B1]
 gi|281305656|gb|EFA97709.1| tyrosine--tRNA ligase [Prevotella timonensis CRIS 5C-B1]
          Length = 433

 Score =  238 bits (607), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 144/430 (33%), Positives = 227/430 (52%), Gaps = 27/430 (6%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG + Q+  P   ++L  Q +V+AY+G D TA SLH GHL  +M+L  LQ+ 
Sbjct: 4   NFVEELKWRGMLAQMM-PGTEELLEKQ-MVSAYLGTDPTADSLHIGHLCGIMMLRHLQRC 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY-GTGKTDALM 125
           GHKP  L+GG T +IGDPS +   R ++ S+ +  N E IK   S F+ + G     A +
Sbjct: 62  GHKPYLLLGGATGMIGDPSGKSLERNLLDSETLYHNQEAIKKQVSKFLDFEGNEPNKAEL 121

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQS--LSFLEFNYMILQAYD 183
           +NN  W+   K++D  RE+G   +VN M++ +SV+ RL  E +  LSF EF Y +LQ YD
Sbjct: 122 VNNYDWMKDFKFLDFAREVGKHITVNYMMAKDSVKKRLNGEANDGLSFTEFTYQLLQGYD 181

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERL--KTPKLFALTSPLLTTASGTKMGKTL 241
           F+ L + +  +LQ+GG+DQWGN+  G +L  R      + F LT PL+T A G K GKT 
Sbjct: 182 FLYLYQKHGIKLQLGGNDQWGNMTTGTELIRRTLGSDEEAFCLTCPLITKADGKKFGKTE 241

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEA--K 299
           +G IWL++  T+PY F+Q+W N+ D D   + K  T+L    I+ +     ++      +
Sbjct: 242 NGNIWLDRNRTTPYAFYQFWLNVSDEDAEKYIKIFTSLERETIESLITEHQQDPGRRTLQ 301

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDE 345
           K +A E+T MVH +E+ + A  A+   F  +                   +P  ++SKD 
Sbjct: 302 KRLAQEVTVMVHSQEDLDMAIEASQILFGKATKESLQKLDEATFLDVFNGVPHYTVSKDL 361

Query: 346 VSRGMGLLTLIVKAGFA--TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
           +  G   +    + G     S  E R+ +K   + +N   ++     +  +D      + 
Sbjct: 362 L--GSTAVDFFTQEGMEIFPSKGELRKLVKGGGVSLNKEKLTAFDQVVTAEDLIDGKYLL 419

Query: 404 LSFGKKNHII 413
           +  GKKN+ +
Sbjct: 420 VQRGKKNYFL 429


>gi|116333090|ref|YP_794617.1| tyrosyl-tRNA synthetase [Lactobacillus brevis ATCC 367]
 gi|116098437|gb|ABJ63586.1| tyrosyl-tRNA synthetase [Lactobacillus brevis ATCC 367]
          Length = 419

 Score =  238 bits (607), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 148/428 (34%), Positives = 222/428 (51%), Gaps = 27/428 (6%)

Query: 9   LSILSE---RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +SI+ E   RG I+Q ++   L  L  +  V  Y G D T  S+H GHL   M+L   Q 
Sbjct: 1   MSIIDELKWRGAINQQTDEAGLAELVDEKSVGLYAGIDPTGDSMHIGHLIPFMILKRFQL 60

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL- 124
            GH+P  L+GG T  IGDPS +   R +    ++  N    +   +  +++  G+  +  
Sbjct: 61  AGHRPHILIGGATGSIGDPSGKKAERVLQTMDQVHHN----EACLTKQMEHLFGQDGSFK 116

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           ++NN  WL  +  +D LR+ G  F+VN ML+ E V SRL  E  +S+ EF Y ILQ+ DF
Sbjct: 117 IVNNYDWLSKVSLLDFLRDYGKLFNVNNMLNKEVVASRL--EVGISYTEFTYQILQSIDF 174

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLK--TPKLFALTSPLLTTASGTKMGKTLS 242
           + L +  D +LQ+GG+DQWGNI  GIDL  + K    K + LT PLL  A GTK GK+  
Sbjct: 175 LHLYEAEDVQLQIGGADQWGNITAGIDLIHKQKGADAKAYGLTIPLLLKADGTKFGKSEG 234

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKK 300
           G IWL+ E TSPY F+Q+W N DD DV+ F K  T L   EI ++A       E  EA+ 
Sbjct: 235 GNIWLDPEKTSPYEFYQFWINTDDRDVIKFLKYFTFLDQDEIKQLADAVATHPEKREAQI 294

Query: 301 IIATEITTMVHGREEAEKAA----------TAAMECFDMSIHSQHMPTISISKDEVSRGM 350
            +A E+T  VHG+E   +A            AA+   ++    + MP +++S    ++  
Sbjct: 295 RLAEEVTAFVHGKEAVVEAQHITKALFSGDVAALTASEIEQGFKKMPAVTVSP---AKKN 351

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            +  L+      +S  +AR  L + AI+IN   +++   +I          + +  GKK 
Sbjct: 352 IVEWLVDDTQIESSRRQAREDLTNGAIRINGEKVTDTDAEIDPTSAFDGKFVIVRRGKKR 411

Query: 411 HIICHLCG 418
           + +  + G
Sbjct: 412 YFLARVVG 419


>gi|308235812|ref|ZP_07666549.1| tyrosyl-tRNA synthetase [Gardnerella vaginalis ATCC 14018]
 gi|311114474|ref|YP_003985695.1| tyrosine--tRNA ligase [Gardnerella vaginalis ATCC 14019]
 gi|310945968|gb|ADP38672.1| tyrosine--tRNA ligase [Gardnerella vaginalis ATCC 14019]
          Length = 439

 Score =  238 bits (607), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 138/401 (34%), Positives = 219/401 (54%), Gaps = 24/401 (5%)

Query: 5   KSDFLSILSE---RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
           ++ F S+  E   RG I Q ++ ++L        +T Y GYD TA+SLH G+L QL+ + 
Sbjct: 9   EAGFASLFEELKWRGLISQSTDEQQLAQALDGEPLTYYCGYDPTAASLHIGNLVQLINMR 68

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN-IEKIKGIFSSFIKYGTGK 120
            LQ  GH PI+L+GG T +IGDP  R    R + S++I     E+++      +    G+
Sbjct: 69  HLQAAGHHPIALVGGATGLIGDP--RQSGERTLNSKDIVAGWAERLRKQIGRILPL-DGE 125

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
                ++N  W+  +  ID LR++G  F V  MLS + V  RL  ++ +SF EF+Y +LQ
Sbjct: 126 NPVRFVSNYDWVSKMSAIDFLRDVGKNFRVGTMLSKDIVARRLNSDEGISFAEFSYQVLQ 185

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
             DF+ L  NY+  LQ+GGSDQWGN+  G+DL  +++   +   TSP++T   G K GK+
Sbjct: 186 GNDFLYLFDNYNVTLQLGGSDQWGNLTSGMDLIRKVRGASVHVFTSPIITDNQGRKFGKS 245

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEA 298
              A+WL+  M SPY F+Q+W N  D +VV   K  T LP SEI+R+ K   +     EA
Sbjct: 246 EGNAMWLDPTMLSPYRFYQFWFNQPDDEVVKLLKAFTFLPKSEIERLNKQIQEDPGSREA 305

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECF---DM-SIHSQHMPTI-----------SISK 343
           ++++A E+T+ VHG +   +A  A+   F   D+ +I  Q +              S+  
Sbjct: 306 QRVLAWEVTSFVHGEDVTNQAIAASSALFGKGDLDAIDEQTLEAALDGVKVKAQDGSLEF 365

Query: 344 DEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSII 384
            + + G  ++   V AG   + +EARR +++  + +NN+ +
Sbjct: 366 AKANSGDRVVEAAVAAGLFRTISEARRAIEAGGLYVNNNRV 406


>gi|146317777|ref|YP_001197489.1| tyrosyl-tRNA synthetase [Streptococcus suis 05ZYH33]
 gi|145688583|gb|ABP89089.1| Tyrosyl-tRNA synthetase [Streptococcus suis 05ZYH33]
          Length = 307

 Score =  238 bits (607), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 114/278 (41%), Positives = 164/278 (58%), Gaps = 2/278 (0%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG + Q ++   L    ++G V+ Y GYD TA SLH GHL  ++    LQ  GHKP 
Sbjct: 7   LKARGLVFQTTDEEALVKALTEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAGHKPY 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+D  R +     +   + KI+G  S F+ +  G   A M+NN  W
Sbjct: 67  ALVGGATGLIGDPSFKDAERSLQTKDTVDGWVTKIQGQLSRFLDFENGDNKAEMVNNYDW 126

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
              I +ID LR++G +++VN M+S +SV+ R+  E  +S+ EF Y I+Q YDF EL   +
Sbjct: 127 FSDISFIDFLRDVGKYYTVNYMMSKDSVKKRI--ETGISYTEFAYQIMQGYDFYELNDKH 184

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
           +  LQ+GGSDQWGN+  G +L  R        +T PL+T ++G K GK+   A+WL+ + 
Sbjct: 185 NVTLQIGGSDQWGNMTAGTELLRRKADKSGHVMTVPLITDSTGKKFGKSEGNAVWLDADK 244

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK 289
           TSPY  +Q+W N+ D D V F K  T L + EI  + K
Sbjct: 245 TSPYEMYQFWLNVMDDDAVRFLKIFTFLSLDEIAEIEK 282


>gi|23007297|ref|ZP_00049230.1| COG0162: Tyrosyl-tRNA synthetase [Magnetospirillum magnetotacticum
           MS-1]
          Length = 233

 Score =  238 bits (606), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 118/214 (55%), Positives = 154/214 (71%), Gaps = 2/214 (0%)

Query: 165 REQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFAL 224
           R+Q LSFL FNYMILQ+Y FVEL + +  RLQMGGSDQWGNI+ GIDLG R+ TP+L+ L
Sbjct: 2   RDQYLSFLVFNYMILQSYVFVELNRRFGTRLQMGGSDQWGNIVNGIDLGRRMGTPQLYGL 61

Query: 225 TSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI 284
           T PLLTTASG KMGKT +GA+WL+  M S Y++WQ+WRN +DADV  F K  T LP+SEI
Sbjct: 62  TCPLLTTASGAKMGKTAAGAVWLDAGMLSAYDYWQFWRNTEDADVARFLKLFTLLPLSEI 121

Query: 285 DRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKD 344
           DR+A LQG EINEAK I+ATE T ++HG E AE+AA  A + F     +  +P++++ + 
Sbjct: 122 DRLAALQGAEINEAKAILATEATRLMHGTEAAEQAAETARKTFVEGTLAASLPSVAVPRS 181

Query: 345 EVSRGMGLLTLIVK--AGFATSTNEARRHLKSNA 376
            +  G+G+LT      A    ST+EARR +++ A
Sbjct: 182 VLEAGLGVLTAFGPEHAKLVPSTSEARRQIRAAA 215


>gi|242076048|ref|XP_002447960.1| hypothetical protein SORBIDRAFT_06g018870 [Sorghum bicolor]
 gi|241939143|gb|EES12288.1| hypothetical protein SORBIDRAFT_06g018870 [Sorghum bicolor]
          Length = 521

 Score =  238 bits (606), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 149/451 (33%), Positives = 229/451 (50%), Gaps = 40/451 (8%)

Query: 3   AFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
           A  +  + +L +RG +   ++  E       G +  Y G+D TA SLH G+L  L+ L W
Sbjct: 73  AASAGVVDVLMKRGLVEATTS--EALAAARPGELKVYCGFDPTAESLHLGNLLGLVALSW 130

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFI-------- 114
            ++ GH  ++L+GG T  +GDPS +   R  +    ++ N + IK + +  +        
Sbjct: 131 FRRCGHTAVALIGGATGRVGDPSGKSSERPELDIAAVEANSDAIKSLVAQILGRVPEPAH 190

Query: 115 KYGTGKTDA---------------LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
              +G+ +                ++L+N  W   I  +D LRE+G F  V  M++ ESV
Sbjct: 191 HSHSGQKEQPSAISADSSQRMGSFVILDNYDWWKEITLLDFLREVGRFARVGSMIAKESV 250

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER-LKT 218
           + RL  E  +S+ EF Y +LQ YDF+ + KN    +Q+GGSDQWGNI  G +L  + L+ 
Sbjct: 251 KKRLASEDGMSYTEFTYQLLQGYDFLYMFKNMGVNVQIGGSDQWGNITAGTELIRKILQV 310

Query: 219 PKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
                LT PLL  + GTK GKT  GAIWL+ +M SPY F+QY+  + D DV+ F K LT 
Sbjct: 311 EGAHGLTFPLLLKSDGTKFGKTEDGAIWLSSKMLSPYKFYQYFFAVPDIDVIRFMKILTF 370

Query: 279 LPMSEIDRMA---KLQGKEINEAKKIIATEITTMVHGR---EEAEKAATAAMECFDMSIH 332
           L + EI+ +    K  G   N  +K +A E+T  VHG    EEA KA  A        + 
Sbjct: 371 LSLDEIEELEDSMKKPGYVPNTVQKRLAEEVTRFVHGEEGLEEALKATEALRPGAQTQLD 430

Query: 333 SQ-------HMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIIS 385
           +Q        +P+ S++ D+V +   L+ L V  G  TS +  +R +K   + +NN  I 
Sbjct: 431 AQTIEGIADDVPSCSLAYDQVFKSP-LVDLAVSTGLLTSKSAVKRLIKQGGLYLNNVRID 489

Query: 386 NEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +E   ++  D      + LS GKKN ++  +
Sbjct: 490 SEDKLVEDGDIVDGKVLLLSAGKKNKMVVRI 520


>gi|323343530|ref|ZP_08083757.1| tyrosine--tRNA ligase [Prevotella oralis ATCC 33269]
 gi|323095349|gb|EFZ37923.1| tyrosine--tRNA ligase [Prevotella oralis ATCC 33269]
          Length = 433

 Score =  238 bits (606), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 141/430 (32%), Positives = 222/430 (51%), Gaps = 27/430 (6%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG + Q+    E      +G+ +AY+G D TA SLH GHL  +M+L  LQ+ 
Sbjct: 4   NFVEELKWRGMLAQMMPGTEE--FLQKGMASAYLGTDPTADSLHIGHLCGIMMLRHLQRC 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY-GTGKTDALM 125
           GHKP  L+GG T +IGDPS + + R ++ +  +  N E IK   + F+ +   G   A M
Sbjct: 62  GHKPFILVGGATGMIGDPSGKSQERNLLDADTLYHNQEAIKAQVAKFLDFEAEGDNAAEM 121

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQAYD 183
           +NN  W+    ++D  RE+G   +VN M++ +SV+ RL  E    LSF EF Y +LQ YD
Sbjct: 122 VNNYDWIKEFTFLDFAREVGKHITVNYMMAKDSVQKRLNGEARDGLSFTEFTYQLLQGYD 181

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERL--KTPKLFALTSPLLTTASGTKMGKTL 241
           F+ L + Y  +LQ+GG+DQWGN+  G +L  R      + + LT PL+T A G K GKT 
Sbjct: 182 FLYLYRKYGVKLQLGGNDQWGNMTTGTELIHRTLGNDTEAYCLTCPLITKADGKKFGKTE 241

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM----AKLQGKEINE 297
           SG IWL++  T+PY F+Q+W N+ D D   + K  T+L    ID +     +  G+ +  
Sbjct: 242 SGNIWLDRNRTTPYKFYQFWLNVSDDDAEKYIKIFTSLEKEVIDALIVEHRQDPGRRV-- 299

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISK 343
            +K +A E+T MVH +E+ + A  A+   F  S                   +P   I +
Sbjct: 300 LQKRLAEEVTAMVHSKEDLDMAVEASNILFGKSTKESLLKLDEATLLDIFDGVPHYIIER 359

Query: 344 DEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
           +++ +    +  +       S ++ R+ +K   + +N   ++     I   D      I 
Sbjct: 360 EQLGQQAVDIFTLEGMDIFQSKSDMRKLVKGGGVSVNKEKLTAFDSTISDADLIDGKYIL 419

Query: 404 LSFGKKNHII 413
           +  GKKN+ +
Sbjct: 420 VQKGKKNYFL 429


>gi|258646957|ref|ZP_05734426.1| tyrosine--tRNA ligase [Dialister invisus DSM 15470]
 gi|260404396|gb|EEW97943.1| tyrosine--tRNA ligase [Dialister invisus DSM 15470]
          Length = 417

 Score =  238 bits (606), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 146/410 (35%), Positives = 218/410 (53%), Gaps = 16/410 (3%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I+Q ++   L  L  Q  ++ Y G D T  S+H GHL   M+L   Q  GH P+
Sbjct: 7   LEWRGAINQQTDAEGLYKLVDQKSISLYCGIDPTGDSMHIGHLIPFMILKRFQLAGHHPV 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL-MLNNET 130
            L+GGGT  IGDPS R   R +  +++++ N + +    ++ +K   G+  +  M+NN  
Sbjct: 67  ILIGGGTGAIGDPSGRTTERVLQTAEQVKHNADSL----TAQMKKLFGEDGSFTMMNNYD 122

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           WL  I  +D LR+ G  F++N ML+ + V SR+  E  +SF EF+Y ILQ+ D+  L + 
Sbjct: 123 WLSKISLLDFLRDYGKLFNINTMLAKDVVASRM--ETGISFTEFSYQILQSIDYKMLYEK 180

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERL-KTPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
              +LQ+GG+DQWGNI  GI+L  +  +T + F LT PL+  A GTK GKT  GA+WL+ 
Sbjct: 181 CGVQLQIGGADQWGNITNGIELIRKTNETHEAFGLTIPLMLKADGTKFGKTAGGAVWLDP 240

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK-LQGKEINE-AKKIIATEIT 307
           + TSPY F+Q+W N DD DVV + K  T L   EID + K +Q    N  A+K +A E+T
Sbjct: 241 KKTSPYEFYQFWFNQDDRDVVKYLKYFTFLTKEEIDTLDKEVQAHPENRTAQKRLAEEVT 300

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG------MGLLTLIVKAGF 361
             VHG     +A       F   I       I  +      G      + ++  +V+AG 
Sbjct: 301 RFVHGEAGLAQALKVTAALFSGDIAELTGEEIEGAFRNTKGGEVAFAPVNIVDALVEAGV 360

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
             S  +AR  + + A+++N   I + +  I      +   I +  GKKN+
Sbjct: 361 EKSKRQAREDITNGAVRVNGMQIKDTEASISAHPNTNGRFIIIRKGKKNY 410


>gi|281424608|ref|ZP_06255521.1| tyrosine--tRNA ligase [Prevotella oris F0302]
 gi|281401279|gb|EFB32110.1| tyrosine--tRNA ligase [Prevotella oris F0302]
          Length = 443

 Score =  237 bits (605), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 130/326 (39%), Positives = 193/326 (59%), Gaps = 13/326 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG + QI  P   + L S  +V+AY+G D TA SLH GHL  +M+L  LQ+ 
Sbjct: 14  NFVEELKWRGMLAQIM-PGTEEYLQSN-MVSAYLGTDPTADSLHIGHLCGIMMLRHLQRC 71

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY-GTGKTDALM 125
           GHKP  L+GG T +IGDPS + + R ++ ++ +  N E IK   + F+ + G     A +
Sbjct: 72  GHKPYLLVGGATGMIGDPSGKSQERNLLDTKTLYHNQEAIKKQVAKFLDFDGNEPNKAEL 131

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQAYD 183
           +NN  W+    ++D  RE+G   +VN M++ +SV+ RL  E    LSF EF Y +LQ YD
Sbjct: 132 VNNYDWMKDFTFLDFAREVGKHITVNYMMAKDSVQKRLNGEARDGLSFTEFTYQLLQGYD 191

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERL--KTPKLFALTSPLLTTASGTKMGKTL 241
           F+ L +++  RLQ+GG+DQWGN+  G +L  R      + F LT PL+T A G K GKT 
Sbjct: 192 FLYLYQHHGVRLQLGGNDQWGNMTTGTELIRRTLGNEAEAFCLTCPLITKADGRKFGKTE 251

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM----AKLQGKEINE 297
           SG +WL++  T+PY F+Q+W N+ D+D   + K  T L    ID +     +  G+ I  
Sbjct: 252 SGNVWLDRNRTTPYAFYQFWLNVSDSDAERYIKIFTDLDKETIDALIADHQQDPGRRI-- 309

Query: 298 AKKIIATEITTMVHGREEAEKAATAA 323
            +K +A E+TTMVH +E+ + A  A+
Sbjct: 310 LQKRLAEEVTTMVHSKEDLDMAIAAS 335


>gi|329121680|ref|ZP_08250297.1| tyrosine--tRNA ligase [Dialister micraerophilus DSM 19965]
 gi|327468150|gb|EGF13636.1| tyrosine--tRNA ligase [Dialister micraerophilus DSM 19965]
          Length = 418

 Score =  237 bits (605), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 138/385 (35%), Positives = 204/385 (52%), Gaps = 15/385 (3%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L+ RG I+Q ++   L  L  +  ++ Y G D T  S+H GHL   M+L   Q  GH P 
Sbjct: 7   LTWRGAINQQTDAEGLYKLTGEKAISLYCGVDPTGDSMHIGHLIPFMMLKRFQLAGHHPY 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+GG T  IGDPS R   R +   ++++ N+   K + +   K   G  +   +NN  W
Sbjct: 67  MLIGGATGSIGDPSGRKTERVLQSMEKVEHNV---KCLTAQLTKLFGGSENITFVNNYEW 123

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L  I  +DLLR+ G  F++N ML+ + V SRL  +  +SF EF Y ILQ+ DF  L    
Sbjct: 124 LSKISLLDLLRDYGKHFNINTMLAKDIVASRL--DTGISFTEFTYQILQSIDFRHLYLTR 181

Query: 192 DCRLQMGGSDQWGNIICGIDL--GERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
           D +LQ+GG+DQWGNI  G+D    +  +  +++ LT PL+  A GTK GKT  GA+WL+ 
Sbjct: 182 DVQLQIGGADQWGNITSGVDFIHTKEGRQAQVYGLTIPLMLKADGTKFGKTAGGAVWLDS 241

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIATEIT 307
           + TS Y F+Q+W N DD DVV + K  T L   EID + KL     E   A+K +A E+T
Sbjct: 242 KKTSTYEFYQFWFNQDDRDVVRYLKFFTFLTKEEIDELDKLTQSQPEKRTAQKRLAEEVT 301

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG------MGLLTLIVKAGF 361
             VHG +  ++A       F  +I    +  I  +      G      M ++  +V+ G 
Sbjct: 302 RFVHGEDGLKEALKVTEALFTGNIQELTLSEIEGAFKNTEGGNVHEAPMNIVEALVQGGV 361

Query: 362 ATSTNEARRHLKSNAIKINNSIISN 386
             S  +AR  +++ AI IN   +++
Sbjct: 362 EKSKRQAREDIENGAISINGVKVTD 386


>gi|303236124|ref|ZP_07322726.1| tyrosine--tRNA ligase [Prevotella disiens FB035-09AN]
 gi|302483706|gb|EFL46699.1| tyrosine--tRNA ligase [Prevotella disiens FB035-09AN]
          Length = 432

 Score =  237 bits (604), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 144/431 (33%), Positives = 227/431 (52%), Gaps = 27/431 (6%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG + QI    E      + +V+AY+G D TA SLH GHL  +M+L  LQ  
Sbjct: 3   NFVEELKWRGMLAQIMPGTEE--FLQKNMVSAYLGTDPTADSLHIGHLCGIMMLRHLQLC 60

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD-ALM 125
           GHKP  L+GG T +IGDPS + + R ++ ++ +  N E IK   S F+ + + + + A M
Sbjct: 61  GHKPYLLIGGATGMIGDPSGKSQERNLLDAETLYHNQEAIKKQVSKFLDFDSNEPNKAEM 120

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQS--LSFLEFNYMILQAYD 183
           +NN  W+    ++D  R +G   +VN M++ +SV+ RL  E S  LSF EF Y +LQ YD
Sbjct: 121 VNNYDWMKEFSFLDFARTVGKHITVNYMMAKDSVKRRLNGEASDGLSFTEFTYQLLQGYD 180

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERL--KTPKLFALTSPLLTTASGTKMGKTL 241
           F+   + +  +LQ+GG+DQWGN+  G +L  R   +  + F LT PL+T A G K GKT 
Sbjct: 181 FLYQYEKFGVKLQLGGNDQWGNMTTGTELIRRTLGQEAEAFCLTCPLITKADGKKFGKTE 240

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEA--K 299
           SG IWL++  T+PY F+Q+W N+ D D   + K  T+L  + ID + +   ++      +
Sbjct: 241 SGNIWLDRNRTTPYAFYQFWLNVSDNDAEKYIKIFTSLDKATIDSLIEEHRQDPGRRTLQ 300

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDE 345
           + +A E+T MVH +E+ + A  A+   F  S                 + +P   ISKD 
Sbjct: 301 RRLAEEVTRMVHSQEDLDMAIAASNILFGKSTKENLLQLDEQTFNDVFKDVPHYEISKDL 360

Query: 346 VSRGMGLLTLIVKAGFA--TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
           +  G   + +  + G     S +E R+ +K   + +N   +      I  +D      + 
Sbjct: 361 L--GQPAVEVFNQEGMQIFPSKSEMRKLVKGGGVSLNKEKLQAFDQVITAEDLIDGKYLL 418

Query: 404 LSFGKKNHIIC 414
           +  GKKN+ + 
Sbjct: 419 MQKGKKNYFLV 429


>gi|299142114|ref|ZP_07035248.1| tyrosine--tRNA ligase [Prevotella oris C735]
 gi|298576576|gb|EFI48448.1| tyrosine--tRNA ligase [Prevotella oris C735]
          Length = 433

 Score =  237 bits (604), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 130/326 (39%), Positives = 193/326 (59%), Gaps = 13/326 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG + QI  P   + L S  +V+AY+G D TA SLH GHL  +M+L  LQ+ 
Sbjct: 4   NFVEELKWRGMLAQIM-PGTEEYLQSN-MVSAYLGTDPTADSLHIGHLCGIMMLRHLQRC 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY-GTGKTDALM 125
           GHKP  L+GG T +IGDPS + + R ++ ++ +  N E IK   + F+ + G     A +
Sbjct: 62  GHKPYLLVGGATGMIGDPSGKSQERNLLDTKTLYHNQEAIKKQVAKFLDFDGNEPNKAEL 121

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQAYD 183
           +NN  W+    ++D  RE+G   +VN M++ +SV+ RL  E    LSF EF Y +LQ YD
Sbjct: 122 VNNYDWMKDFTFLDFAREVGKHITVNYMMAKDSVQKRLNGEARDGLSFTEFTYQLLQGYD 181

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERL--KTPKLFALTSPLLTTASGTKMGKTL 241
           F+ L +++  RLQ+GG+DQWGN+  G +L  R      + F LT PL+T A G K GKT 
Sbjct: 182 FLYLYQHHGVRLQLGGNDQWGNMTTGTELIRRTLGNEAEAFCLTCPLITKADGRKFGKTE 241

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM----AKLQGKEINE 297
           SG +WL++  T+PY F+Q+W N+ D+D   + K  T L    ID +     +  G+ I  
Sbjct: 242 SGNVWLDRNRTTPYAFYQFWLNVSDSDAERYIKIFTDLDKETIDALIADHQQDPGRRI-- 299

Query: 298 AKKIIATEITTMVHGREEAEKAATAA 323
            +K +A E+TTMVH +E+ + A  A+
Sbjct: 300 LQKRLAEEVTTMVHSKEDLDMAIAAS 325


>gi|29840193|ref|NP_829299.1| tyrosyl-tRNA synthetase [Chlamydophila caviae GPIC]
 gi|75539675|sp|Q823H9|SYY_CHLCV RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|29834541|gb|AAP05177.1| tyrosyl-tRNA synthetase [Chlamydophila caviae GPIC]
          Length = 412

 Score =  237 bits (604), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 141/424 (33%), Positives = 223/424 (52%), Gaps = 29/424 (6%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           DF+  L +RG +   S+   LD + S   ++AY+G+D TA+SLH GH   +  L  +   
Sbjct: 3   DFIKHLKDRGILEDFSHG--LDSVESP--ISAYLGFDPTAASLHIGHWIGICFLRRMASF 58

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           G  P++L+G  T +IGDPS +   R ++ S E+  N +K+    S ++          ++
Sbjct: 59  GITPVALVGSATGMIGDPSGKSIERTLLESNEVAHNSKKLSECLSHYLP------GVQIV 112

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W      ID LR++G  F +  ML  ++++ R++ E+ +S+ EF+Y++LQ+YDF  
Sbjct: 113 NNMEWFQGTTVIDFLRDVGKHFRLGTMLGKDTIKQRIQSEEGISYTEFSYILLQSYDFAH 172

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + +   LQ GGSDQWGNI  GID   R    + + LT PLLT + G K+GKT SG IW
Sbjct: 173 LFEKHGIALQCGGSDQWGNITSGIDYIRRKGLGQAYGLTYPLLTNSQGKKIGKTESGTIW 232

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           L+  +TSPY  +QY+  + DA+V   A+ LT L   EI  + K    +    KK +   I
Sbjct: 233 LDPTLTSPYELYQYFLRLPDAEVPKIARTLTLLSNEEIFDLDKKFLSDPIAVKKFVTETI 292

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISIS--KDEVSRGMGL------------ 352
            T +HG +  +KA     +    S+H   + +IS    +D +S G G+            
Sbjct: 293 VTSIHGEDGLKKA-----QMVTQSMHPGKVSSISEKDFQDLISMGQGISLDRVQTLGKRW 347

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           + L V  GF  S  EARR ++   + +N+  I++E    + +       + L+ GKK  +
Sbjct: 348 IDLFVGVGFCNSKGEARRLIEQKGLYVNSEPIADEHSVFEERQVCYDQYVLLAQGKKKKL 407

Query: 413 ICHL 416
           + HL
Sbjct: 408 VLHL 411


>gi|320527328|ref|ZP_08028513.1| tyrosyl-tRNA synthetase [Solobacterium moorei F0204]
 gi|320132352|gb|EFW24897.1| tyrosyl-tRNA synthetase [Solobacterium moorei F0204]
          Length = 415

 Score =  237 bits (604), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 138/416 (33%), Positives = 230/416 (55%), Gaps = 14/416 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG +   ++   L     +   T Y G+D TA SLH GHL Q++LL   Q  
Sbjct: 2   NFIEELQWRGLVKDCTDKEGLGEQL-KNPTTIYCGFDPTADSLHVGHLQQILLLRRYQLQ 60

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI+L GG T +IGDP    E R+++  +E+  N E I+   + F+ +  G   A+M 
Sbjct: 61  GHQPIALCGGFTGMIGDPRPTTE-RKLLTHEEVLHNAECIREQLAKFLSF-EGSNAAIME 118

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  +  +D LR+ G  F+++ ML  ++++ RL  +  +S+ EF+Y ILQ+ D+  
Sbjct: 119 NNNNWLGEMHLLDFLRDYGKLFNISYMLQKDTIKKRL--DSGISYTEFSYTILQSIDWYN 176

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLK--TPKLFALTSPLLTTASGTKMGKTLSGA 244
           L K Y+C++Q+GGSDQWGN+  G++L  +++    K+F +TSPL+T + G+K GK+    
Sbjct: 177 LFKKYNCQIQIGGSDQWGNLTSGMELIRKMEGDNAKVFGITSPLITKSDGSKFGKSEGKN 236

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKII 302
           IWL+   T+ Y F+Q+W N  DAD+V + KRL+     EI    +      E  E +K +
Sbjct: 237 IWLDPARTNAYEFYQFWLNTPDADIVDYLKRLSFHTPEEIMGYEESLKNAPEKREGQKAL 296

Query: 303 ATEITTMVHGREEAEKAATAAMECFD---MSIHSQHMPT--ISISKDEVSRGMGLLTLIV 357
           A E+T +VHG++  +KA       F    M++  + M        K  V  G+ L+  +V
Sbjct: 297 AAELTELVHGKDGLKKALRITETFFKGDIMTLSPEEMKEGLADAKKAAVEDGVTLIDALV 356

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            A    S +EAR+ ++  ++ +N + +++ +  +   +  +     L  GKKN+ +
Sbjct: 357 TAEVCKSKSEARKLIEQGSVSVNGNKVTDIQAVLHQSEAINQEFSILKKGKKNYFV 412


>gi|313892288|ref|ZP_07825881.1| tyrosine--tRNA ligase [Dialister microaerophilus UPII 345-E]
 gi|313119426|gb|EFR42625.1| tyrosine--tRNA ligase [Dialister microaerophilus UPII 345-E]
          Length = 418

 Score =  236 bits (603), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 138/385 (35%), Positives = 203/385 (52%), Gaps = 15/385 (3%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L+ RG I+Q ++   L  L  +  ++ Y G D T  S+H GHL   M+L   Q  GH P 
Sbjct: 7   LTWRGAINQQTDAEGLYKLTGEKAISLYCGVDPTGDSMHIGHLIPFMMLKRFQLAGHHPY 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+GG T  IGDPS R   R +   ++++ N+   K + +   K   G  +   +NN  W
Sbjct: 67  MLIGGATGSIGDPSGRKTERVLQSMEKVEHNV---KCLTAQLTKLFGGSENITFVNNYEW 123

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L  I  +DLLR+ G  F++N ML+ + V SRL  +  +SF EF Y ILQ+ DF  L    
Sbjct: 124 LSKISLLDLLRDYGKHFNINTMLAKDIVASRL--DTGISFTEFTYQILQSIDFRHLYLTR 181

Query: 192 DCRLQMGGSDQWGNIICGIDL--GERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
           D +LQ+GG+DQWGNI  G+D    +  +   ++ LT PL+  A GTK GKT  GA+WL+ 
Sbjct: 182 DVQLQIGGADQWGNITSGVDFIHTKEGRDAPVYGLTIPLMLKADGTKFGKTAGGAVWLDS 241

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIATEIT 307
           + TS Y F+Q+W N DD DVV + K  T L   EID + KL     E   A+K +A E+T
Sbjct: 242 KKTSTYEFYQFWFNQDDRDVVRYLKFFTFLTKEEIDELDKLTQSQPEKRTAQKRLAEEVT 301

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG------MGLLTLIVKAGF 361
             VHG +  ++A       F  +I    +  I  +      G      M ++  +V+ G 
Sbjct: 302 RFVHGEDGLKEALKVTEALFTGNIQELTLSEIEGAFKNTEGGNVHEAPMNIVEALVQGGV 361

Query: 362 ATSTNEARRHLKSNAIKINNSIISN 386
             S  +AR  +++ AI IN   +++
Sbjct: 362 EQSKRQAREDIENGAISINGVKVTD 386


>gi|160915069|ref|ZP_02077282.1| hypothetical protein EUBDOL_01077 [Eubacterium dolichum DSM 3991]
 gi|158432868|gb|EDP11157.1| hypothetical protein EUBDOL_01077 [Eubacterium dolichum DSM 3991]
          Length = 410

 Score =  236 bits (603), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 140/408 (34%), Positives = 217/408 (53%), Gaps = 20/408 (4%)

Query: 15  RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLM 74
           RG I  +++P EL+   + G +T YIG D T  SLH GH + L+    L++ GH P+ L+
Sbjct: 10  RGLIDNVTSP-ELEEKLNNGGLTFYIGTDPTGDSLHIGHYSSLLCAKRLKEHGHHPLMLV 68

Query: 75  GGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCS 134
           GG T  IGDP    E R M+  + ++ N   +         +        M+NN  W   
Sbjct: 69  GGATGFIGDPKATGE-RSMLTKEVLEHNYHCLSKQIEELFGFE-------MVNNLDWTKD 120

Query: 135 IKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCR 194
           I  ID LR+IG  F+V+ M++ E+V+ RL  E  +S+ EF+YMILQA+DF+ L +   C 
Sbjct: 121 ITIIDFLRDIGKLFNVSYMMNKETVKRRL--ESGISYTEFSYMILQAHDFLHLYEEKGCT 178

Query: 195 LQMGGSDQWGNIICGIDLGERLKTPKL--FALTSPLLTTASGTKMGKTLSGAIWLNKEMT 252
           LQ+GG DQWGNI  G++L  +     +  + LT PL+T A GTK GK+ +G +WL+K  T
Sbjct: 179 LQIGGQDQWGNITSGLELIRKKHGADVECYGLTMPLITKADGTKFGKSETGTVWLDKNKT 238

Query: 253 SPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIATEITTMV 310
           S Y  +Q+  N +D  V+ + K+LT L   EID + +       + EA+K +A E+ T +
Sbjct: 239 SAYEMYQFLLNSEDEKVIDYLKKLTFLKKEEIDTLEECVKTAPHLREAQKALAKEVVTFL 298

Query: 311 HGREEAEKAATAAMECFDMSIHSQHMPTIS-----ISKDEVSRGMGLLTLIVKAGFATST 365
           HG  E  KA   +   F   + +      S       K EV+  + L   +V +G A+S 
Sbjct: 299 HGENEYNKAIKISEALFKGDVKTLSSEEASDALKGFEKREVADHITLTEALVSSGIASSK 358

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            EAR  +K N+I++N   I++    +  +      +  +  GK+N+ +
Sbjct: 359 REAREWIKGNSIQVNGEKITDVDFVVSSEHALCHKDTLIKRGKRNYFV 406


>gi|256394598|ref|YP_003116162.1| tyrosyl-tRNA synthetase [Catenulispora acidiphila DSM 44928]
 gi|256360824|gb|ACU74321.1| tyrosyl-tRNA synthetase [Catenulispora acidiphila DSM 44928]
          Length = 420

 Score =  236 bits (603), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 134/391 (34%), Positives = 212/391 (54%), Gaps = 12/391 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +D +  L   G +   ++   L    + G V  Y+G+D TA SLH G+L Q++    LQ+
Sbjct: 2   TDIVDDLKWHGLLALSTDEDALRKAFADGPVIFYVGFDPTAPSLHFGNLVQMIAARRLQE 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQE-IQENIEKIKGIFSSFIKYGTGKTDAL 124
            GH P+ L+GG T +IGDP  +  + R + S+E + E + +I+   S FI +  G   A 
Sbjct: 62  AGHTPLILIGGSTGLIGDP--KPNAERTLNSKETVAEWVVRIRDQVSRFISF-EGPNAAR 118

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           ++NN  W   +  ID LR+IG  F V +MLS ++V +RL  E  +S+ EF+Y +LQ  D+
Sbjct: 119 VVNNLDWTAPMSAIDFLRDIGKHFRVGKMLSKDAVSARLNSEAGISYTEFSYQVLQGMDY 178

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL + Y C LQ GGSDQWGNI  G+DL  + +   + AL +PLL  A GTK GKT SG 
Sbjct: 179 LELYRQYGCTLQTGGSDQWGNITAGVDLIHKAEGVSVHALATPLLLKADGTKFGKTESGT 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT--TLPMSEIDRMAKLQGKEINEAKKII 302
           +WL+ ++ +PY F+Q++ N +DA V+S+ K  +  +    E      ++  ++  A+K +
Sbjct: 239 VWLSGDLMTPYAFYQFFLNSEDAMVISYLKVFSFRSREEIEELERLTMEKPQMRAAQKAL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQ-HMPTISISKDEV-----SRGMGLLTLI 356
           A E+TT+VHG E   +   A+   F     ++   PT+  +  E+     +  + +  L+
Sbjct: 299 AEEVTTLVHGAEATAQVIAASKALFGQGDLTELDEPTLRAALSELPGTKTAELVPVAQLL 358

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNE 387
              G   S    RR +      +NN  I  E
Sbjct: 359 ADTGLVVSRGAGRRTINEGGAYVNNRKIEAE 389


>gi|283783150|ref|YP_003373904.1| tyrosine--tRNA ligase [Gardnerella vaginalis 409-05]
 gi|283441835|gb|ADB14301.1| tyrosine--tRNA ligase [Gardnerella vaginalis 409-05]
          Length = 439

 Score =  236 bits (603), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 136/402 (33%), Positives = 215/402 (53%), Gaps = 24/402 (5%)

Query: 5   KSDFLSILSE---RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
           ++ F S+  E   RG I Q ++ ++L        +T Y GYD TA+SLH G+L QL+ + 
Sbjct: 9   EAGFASLFEELKWRGLISQSTDEQQLAQALDGEPLTYYCGYDPTAASLHIGNLVQLINMR 68

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN-IEKIKGIFSSFIKYGTGK 120
            LQ  GH PI+L+GG T +IGDP  R    R + S++I     E+++      +    G+
Sbjct: 69  HLQAAGHHPIALVGGATGLIGDP--RQSGERTLNSKDIVAGWAERLRKQIGRILPL-DGE 125

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
                ++N  W+  +  ID LR++G  F V  MLS + V  RL  ++ +SF EF+Y +LQ
Sbjct: 126 NPVRFVSNYDWVSKMSAIDFLRDVGKNFRVGTMLSKDIVARRLNSDEGISFAEFSYQVLQ 185

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
             DF+ L  NYD  LQ+GGSDQWGN+  G+DL  +++   +   TSP++T   G K GK+
Sbjct: 186 GNDFLYLFDNYDVTLQLGGSDQWGNLTSGMDLIRKVRGTSVNVFTSPIITDNQGRKFGKS 245

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN--EA 298
              A+WL+  M SPY F+Q+W N  D +VV   K  T LP  EI+R+A+    +    EA
Sbjct: 246 EGNAMWLDPSMLSPYRFYQFWFNQPDDEVVKLLKVFTFLPKDEIERLAQQIQDDPGSREA 305

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECF--------DMSIHSQHMPTISISKDEVSRGM 350
           ++++A E+T+ VHG +   +A  A+   F        D       +  + +  ++ S   
Sbjct: 306 QRVLAWEVTSFVHGEDLTNQAIEASSALFGRGDLCNIDEQTLEAALDGVKVKAEDGSLDF 365

Query: 351 G-------LLTLIVKAGFATSTNEARRHLKSNAIKINNSIIS 385
                   ++   V AG   + +EARR +++  + +NN  +S
Sbjct: 366 AKAKVADRVVEAAVAAGLFRTVSEARRAIEAGGLYLNNERVS 407


>gi|23335281|ref|ZP_00120518.1| COG0162: Tyrosyl-tRNA synthetase [Bifidobacterium longum DJO10A]
 gi|189439665|ref|YP_001954746.1| tyrosyl-tRNA synthetase [Bifidobacterium longum DJO10A]
 gi|213692733|ref|YP_002323319.1| tyrosyl-tRNA synthetase [Bifidobacterium longum subsp. infantis
           ATCC 15697]
 gi|227546218|ref|ZP_03976267.1| tyrosine--tRNA ligase [Bifidobacterium longum subsp. infantis ATCC
           55813]
 gi|239622221|ref|ZP_04665252.1| tyrosyl-tRNA synthetase [Bifidobacterium longum subsp. infantis
           CCUG 52486]
 gi|296453812|ref|YP_003660955.1| tyrosyl-tRNA synthetase [Bifidobacterium longum subsp. longum
           JDM301]
 gi|312133067|ref|YP_004000406.1| tyrs [Bifidobacterium longum subsp. longum BBMN68]
 gi|317481829|ref|ZP_07940857.1| tyrosyl-tRNA synthetase [Bifidobacterium sp. 12_1_47BFAA]
 gi|322688773|ref|YP_004208507.1| tyrosyl-tRNA synthase [Bifidobacterium longum subsp. infantis 157F]
 gi|322690764|ref|YP_004220334.1| tyrosyl-tRNA synthase [Bifidobacterium longum subsp. longum JCM
           1217]
 gi|254783569|sp|B3DSX9|SYY_BIFLD RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|254783570|sp|B7GTN2|SYY_BIFLI RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|189428100|gb|ACD98248.1| Tyrosyl-tRNA synthetase [Bifidobacterium longum DJO10A]
 gi|213524194|gb|ACJ52941.1| tyrosyl-tRNA synthetase [Bifidobacterium longum subsp. infantis
           ATCC 15697]
 gi|227213199|gb|EEI81071.1| tyrosine--tRNA ligase [Bifidobacterium longum subsp. infantis ATCC
           55813]
 gi|239514218|gb|EEQ54085.1| tyrosyl-tRNA synthetase [Bifidobacterium longum subsp. infantis
           CCUG 52486]
 gi|296183243|gb|ADH00125.1| tyrosyl-tRNA synthetase [Bifidobacterium longum subsp. longum
           JDM301]
 gi|311774060|gb|ADQ03548.1| TyrS [Bifidobacterium longum subsp. longum BBMN68]
 gi|316916766|gb|EFV38160.1| tyrosyl-tRNA synthetase [Bifidobacterium sp. 12_1_47BFAA]
 gi|320455620|dbj|BAJ66242.1| tyrosyl-tRNA synthase [Bifidobacterium longum subsp. longum JCM
           1217]
 gi|320458891|dbj|BAJ69512.1| tyrosyl-tRNA synthase [Bifidobacterium longum subsp. infantis ATCC
           15697]
 gi|320460109|dbj|BAJ70729.1| tyrosyl-tRNA synthase [Bifidobacterium longum subsp. infantis 157F]
          Length = 440

 Score =  236 bits (603), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 143/426 (33%), Positives = 220/426 (51%), Gaps = 49/426 (11%)

Query: 5   KSDFLSILSE---RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
           ++ F ++L E   RG I Q ++   L    +   +T Y G+D TA+SLH G+L QL+ + 
Sbjct: 9   EAGFNTLLEELEWRGLISQSTDRDRLAEALNGEPITYYCGFDPTAASLHIGNLVQLINMR 68

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI-----EKIKGIFSSFIKY 116
            LQ  GH PI+L+GG T +IGDP  R    R +  +++          +I GI  +    
Sbjct: 69  HLQLAGHHPIALVGGATGLIGDP--RQSGERTLNPKDVVAGWADRLKNQIGGILDT---- 122

Query: 117 GTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNY 176
             G      ++N  W  S+  ID LR++G  F +  ML+ ++V  RL  E+ +SF EF+Y
Sbjct: 123 -EGANAVRFVSNYDWTASMTVIDFLRDVGKNFRLGTMLAKDTVARRLNSEEGISFTEFSY 181

Query: 177 MILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTK 236
            +LQ  DF+ L   Y C L++GGSDQWGN+  G+DL  +++   +   TSP++T ASG K
Sbjct: 182 QVLQGNDFLHLFDEYHCTLELGGSDQWGNLTSGLDLIHKVRGVDVNVFTSPIITDASGKK 241

Query: 237 MGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ----G 292
            GK+   A+WL+  M SPY F+Q+W N  D ++ S  K  T LP +EI+R+ +      G
Sbjct: 242 FGKSEGNAVWLDATMLSPYKFYQFWINRPDVEMESLLKAFTFLPKAEIERLVEESKTNPG 301

Query: 293 KEINEAKKIIATEITTMVHGREEAEKAATAAMECFD----------------------MS 330
           K   EA+K +A E+T+ VHG    + A  A+   F                       + 
Sbjct: 302 KR--EAQKTLAWEVTSFVHGEAATQAAIDASGALFGRGGNLEDIDEETLESVLDGFKVVD 359

Query: 331 IHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQ 390
            + +H+  +S   D V      +     AG   S +EARR +KS  + +NN+ I +E+  
Sbjct: 360 ENGEHVFPVSKPGDRV------IDAAQAAGLFKSASEARRAIKSGGVYLNNNRIEDEEQV 413

Query: 391 IKLQDF 396
           +   DF
Sbjct: 414 LAEADF 419


>gi|291517156|emb|CBK70772.1| tyrosyl-tRNA synthetase [Bifidobacterium longum subsp. longum F8]
          Length = 440

 Score =  236 bits (602), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 143/426 (33%), Positives = 220/426 (51%), Gaps = 49/426 (11%)

Query: 5   KSDFLSILSE---RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
           ++ F ++L E   RG I Q ++   L    +   +T Y G+D TA+SLH G+L QL+ + 
Sbjct: 9   EAGFNTLLEELEWRGLISQSTDRDRLAEALNGEPITYYCGFDPTAASLHIGNLVQLINMR 68

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI-----EKIKGIFSSFIKY 116
            LQ  GH PI+L+GG T +IGDP  R    R +  +++          +I GI  +    
Sbjct: 69  HLQLAGHHPIALVGGATGLIGDP--RQSGERTLNPKDVVAGWADRLKNQIGGILDT---- 122

Query: 117 GTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNY 176
             G      ++N  W  S+  ID LR++G  F +  ML+ ++V  RL  E+ +SF EF+Y
Sbjct: 123 -EGANAVRFVSNYDWTASMTVIDFLRDVGKNFRLGTMLAKDTVARRLNSEEGISFTEFSY 181

Query: 177 MILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTK 236
            +LQ  DF+ L   Y C L++GGSDQWGN+  G+DL  +++   +   TSP++T ASG K
Sbjct: 182 QVLQGNDFLHLFDEYHCTLELGGSDQWGNLTSGLDLIHKVRGVDVNVFTSPIITDASGKK 241

Query: 237 MGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ----G 292
            GK+   A+WL+  M SPY F+Q+W N  D ++ S  K  T LP +EI+R+ +      G
Sbjct: 242 FGKSEGNAVWLDATMLSPYKFYQFWINRPDVEMESLLKAFTFLPKAEIERLVEESKTNPG 301

Query: 293 KEINEAKKIIATEITTMVHGREEAEKAATAAMECFD----------------------MS 330
           K   EA+K +A E+T+ VHG    + A  A+   F                       + 
Sbjct: 302 KR--EAQKTLAWEVTSFVHGEAATQSAIDASGALFGRGGNLEDIDEEMLESVLDGFKVVD 359

Query: 331 IHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQ 390
            + +H+  +S   D V      +     AG   S +EARR +KS  + +NN+ I +E+  
Sbjct: 360 ENGEHVFPVSKPGDRV------IDAAQAAGLFKSASEARRAIKSGGVYLNNNRIEDEEQV 413

Query: 391 IKLQDF 396
           +   DF
Sbjct: 414 LAEADF 419


>gi|50954390|ref|YP_061678.1| tyrosyl-tRNA synthetase [Leifsonia xyli subsp. xyli str. CTCB07]
 gi|81391211|sp|Q6AGC2|SYY_LEIXX RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|50950872|gb|AAT88573.1| tyrosyl-tRNA synthetase [Leifsonia xyli subsp. xyli str. CTCB07]
          Length = 442

 Score =  236 bits (602), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 130/382 (34%), Positives = 212/382 (55%), Gaps = 13/382 (3%)

Query: 15  RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLM 74
           RG ++  ++   L  L +   +  Y G+D TA SLH G+L QL+ +  LQ  GH+P  L+
Sbjct: 31  RGLVYVSTDEAALKQLLAGEPIAYYCGFDPTAPSLHLGNLVQLLTMRRLQLAGHRPFGLV 90

Query: 75  GGGTSIIGDPSFRDESRRMMRSQE-IQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
           GG T +IGDP  +  + R + ++E + E +  ++   + F+    G     ++NN  W  
Sbjct: 91  GGSTGLIGDP--KPSAERTLNAKETVAEWVGSLREQVTRFLS-AEGDNAVRLVNNLDWTA 147

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDC 193
            +  ID LREIG  F V  ML  ++V +RL  ++ +S+ EF+Y ILQ  D++EL + + C
Sbjct: 148 PLSAIDFLREIGKHFRVGAMLKKDAVAARLNSDEGISYTEFSYQILQGLDYLELYRQHGC 207

Query: 194 RLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTS 253
            LQ GGSDQWGN+  G +L  R++     A+ +PL+T + GTK GK+   A+WL+  +TS
Sbjct: 208 VLQTGGSDQWGNLTSGTELIRRVEGGHAHAVGTPLITNSDGTKFGKSEGNAVWLDPALTS 267

Query: 254 PYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIATEITTMVH 311
           PY  +Q+W N DDADV++  K  T L   EI+R+ +   +E    EA++ +A ++T++VH
Sbjct: 268 PYAMYQFWLNTDDADVIARLKVFTFLHRDEIERLERAVAEEPFRREAQRRLALDVTSLVH 327

Query: 312 GREEAEKAATAAMECFDMS--IHSQHMPTISISKDEV-----SRGMGLLTLIVKAGFATS 364
           G   AE    A+   F     +  Q   T++ +  E+     + G+ +   +V  G   S
Sbjct: 328 GAAAAEAVIAASEALFGRGGDLAQQDTDTLASALRELPHTVSAPGVAIAQALVDTGLTKS 387

Query: 365 TNEARRHLKSNAIKINNSIISN 386
            +EARR +    +  NN+ + +
Sbjct: 388 LSEARRAVAQGGVSANNATVQD 409


>gi|227877944|ref|ZP_03995949.1| tyrosyl-tRNA synthetase [Lactobacillus crispatus JV-V01]
 gi|256849270|ref|ZP_05554703.1| tyrosyl-tRNA synthetase [Lactobacillus crispatus MV-1A-US]
 gi|262047284|ref|ZP_06020242.1| tyrosyl-tRNA synthetase [Lactobacillus crispatus MV-3A-US]
 gi|293381496|ref|ZP_06627491.1| tyrosyl-tRNA synthetase [Lactobacillus crispatus 214-1]
 gi|312984408|ref|ZP_07791744.1| tyrosine--tRNA ligase [Lactobacillus crispatus CTV-05]
 gi|227862447|gb|EEJ69961.1| tyrosyl-tRNA synthetase [Lactobacillus crispatus JV-V01]
 gi|256714046|gb|EEU29034.1| tyrosyl-tRNA synthetase [Lactobacillus crispatus MV-1A-US]
 gi|260572529|gb|EEX29091.1| tyrosyl-tRNA synthetase [Lactobacillus crispatus MV-3A-US]
 gi|290921966|gb|EFD98973.1| tyrosyl-tRNA synthetase [Lactobacillus crispatus 214-1]
 gi|310894195|gb|EFQ43281.1| tyrosine--tRNA ligase [Lactobacillus crispatus CTV-05]
          Length = 420

 Score =  236 bits (602), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 146/387 (37%), Positives = 203/387 (52%), Gaps = 17/387 (4%)

Query: 5   KSDFLSILSERGFIHQISNPREL-DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           K D L  L  RG I+Q ++   L   L        Y G D T  SLH GHL   M+L   
Sbjct: 3   KFDILEDLKWRGAINQETDEEGLRKYLAEHDDWALYCGTDPTGDSLHIGHLIPFMILKRF 62

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q  G+ P+ L+GG T  IGDPS R   R +  +++++ N E +    ++ +K   G  + 
Sbjct: 63  QMAGYHPVILIGGVTGAIGDPSGRKTERTLQTAEQVKHNEESL----TNQMKKLFGTENF 118

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            + NN  WL  +  ID LR+ G  F VN M++ + V SRL  E  +SF EF Y ILQA D
Sbjct: 119 EIRNNAEWLSKLNLIDFLRDYGKLFQVNNMINKDVVASRL--ENGISFTEFTYQILQAID 176

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK--LFALTSPLLTTASGTKMGKTL 241
           F  L K+   +LQ+GGSDQWGNI  GIDL  +L+      F LT PL+  A GTK GK+ 
Sbjct: 177 FYHLNKDDGVQLQIGGSDQWGNITAGIDLIHKLEGADRPAFGLTIPLMLKADGTKFGKSA 236

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAK 299
            GA+WL+ E TSPY F+Q+W N DD DVV + K  T L   EI+ +A+   KE     A+
Sbjct: 237 GGAVWLDPEKTSPYEFYQFWINQDDRDVVKYLKYFTFLSREEIEDLAEKTEKEPWKRAAQ 296

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI------SISKDEVSRGMGLL 353
           K +A E+T  VHG    E+A       F  +I +  +  I      + S +  +    ++
Sbjct: 297 KKLAEEVTKFVHGEAGLEEAKMITDALFSGNIKNLSVAQIEQGLKNAPSAEAGNEKKNIV 356

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKIN 380
             +V      S  +AR  +K+ AI +N
Sbjct: 357 DFLVDTKIEPSKRQAREDVKNGAIYVN 383


>gi|23465618|ref|NP_696221.1| tyrosyl-tRNA synthetase [Bifidobacterium longum NCC2705]
 gi|81753963|sp|Q8G5G1|SYY_BIFLO RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|23326289|gb|AAN24857.1| tyrosyl-tRNA synthetase [Bifidobacterium longum NCC2705]
          Length = 440

 Score =  236 bits (602), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 143/426 (33%), Positives = 220/426 (51%), Gaps = 49/426 (11%)

Query: 5   KSDFLSILSE---RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
           ++ F ++L E   RG I Q ++   L    +   +T Y G+D TA+SLH G+L QL+ + 
Sbjct: 9   EAGFNTLLEELEWRGLISQSTDRDRLAEALNGEPITYYCGFDPTAASLHIGNLVQLINMR 68

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI-----EKIKGIFSSFIKY 116
            LQ  GH PI+L+GG T +IGDP  R    R +  +++          +I GI  +    
Sbjct: 69  HLQLAGHHPIALVGGATGLIGDP--RQSGERTLNPKDVVAGWADRLKNQIGGILDT---- 122

Query: 117 GTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNY 176
             G      ++N  W  S+  ID LR++G  F +  ML+ ++V  RL  E+ +SF EF+Y
Sbjct: 123 -EGANAVRFVSNYDWTASMTVIDFLRDVGKNFRLGTMLAKDTVARRLNSEEGISFTEFSY 181

Query: 177 MILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTK 236
            +LQ  DF+ L   Y C L++GGSDQWGN+  G+DL  +++   +   TSP++T ASG K
Sbjct: 182 QVLQGNDFLHLFDEYHCTLELGGSDQWGNLTSGLDLIHKVRGVDVNVFTSPIITDASGKK 241

Query: 237 MGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ----G 292
            GK+   A+WL+  M SPY F+Q+W N  D ++ S  K  T LP +EI+R+ +      G
Sbjct: 242 FGKSEGNAVWLDATMLSPYKFYQFWINRPDVEMESLLKAFTFLPKAEIERLVEESKTNPG 301

Query: 293 KEINEAKKIIATEITTMVHGREEAEKAATAAMECFD----------------------MS 330
           K   EA+K +A E+T+ VHG    + A  A+   F                       + 
Sbjct: 302 KR--EAQKTLAWEVTSFVHGEAATQAAIDASGALFGRGGNLEDIDEEMLESVLDGFKVVD 359

Query: 331 IHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQ 390
            + +H+  +S   D V      +     AG   S +EARR +KS  + +NN+ I +E+  
Sbjct: 360 ENGEHVFPVSKPGDRV------IDAAQAAGLFKSASEARRAIKSGGVYLNNNRIEDEEQV 413

Query: 391 IKLQDF 396
           +   DF
Sbjct: 414 LAEADF 419


>gi|313884403|ref|ZP_07818164.1| tyrosine--tRNA ligase [Eremococcus coleocola ACS-139-V-Col8]
 gi|312620187|gb|EFR31615.1| tyrosine--tRNA ligase [Eremococcus coleocola ACS-139-V-Col8]
          Length = 420

 Score =  236 bits (602), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 141/393 (35%), Positives = 204/393 (51%), Gaps = 29/393 (7%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I+Q ++   L  L S+  +  Y G D T  S+H GHL   M+L   Q  GH PI
Sbjct: 7   LEWRGAINQQTDADGLKKLVSEKEIYLYCGVDPTGDSMHIGHLIPFMILKRFQLAGHHPI 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            ++GG T  IGDPS R   R +   + ++ N +K+K         G G  D  ++NN  W
Sbjct: 67  VVIGGATGSIGDPSGRTSERTLQTMEVVENNADKLKAQMIHLFNKGQG-GDFEIVNNHDW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L  I  +D LR+ G  F++N ML+ + V SRL  +  +SF EF+Y ILQ+ DF  L K +
Sbjct: 126 LGKISLLDFLRDYGKHFNINTMLAKDIVASRL--DVGISFTEFSYQILQSIDFHHLYKEH 183

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKL--FALTSPLLTTASGTKMGKTLSGAIWLNK 249
             +LQ+GG DQWGNI  G+D   R++ P+   + LT PL+  + GTK GK+   AIWL+ 
Sbjct: 184 QVQLQIGGGDQWGNITSGLDFIRRMEGPEAEAYGLTIPLMLKSDGTKFGKSAGNAIWLDP 243

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE------AKKIIA 303
           E T+PY F+Q+W N  D DVV F K  T L   EID +A    KEI E      A++ +A
Sbjct: 244 EKTTPYEFYQFWLNQQDTDVVKFLKYFTFLSKEEIDALA----KEIEERPHLRVAQQRLA 299

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLL 353
            EIT  VHG+   ++A       F   +            ++MP  +  + + +    L 
Sbjct: 300 EEITRFVHGQAALDEAQLITKALFTGDVAQLNEKQIRDGFKNMPQFTAPQTDNT----LA 355

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISN 386
             +   G   S  +AR  + + AI +N   I++
Sbjct: 356 IWLTDIGLVDSRRQAREFVSNGAISLNGQKITD 388


>gi|330795995|ref|XP_003286055.1| hypothetical protein DICPUDRAFT_30367 [Dictyostelium purpureum]
 gi|325083963|gb|EGC37402.1| hypothetical protein DICPUDRAFT_30367 [Dictyostelium purpureum]
          Length = 465

 Score =  236 bits (602), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 146/439 (33%), Positives = 230/439 (52%), Gaps = 43/439 (9%)

Query: 7   DFLSILSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           + + IL  RGFIHQ++   + +  +  +  +T Y G+D TA SLH G+L  LM++  L+K
Sbjct: 35  NVIDILKARGFIHQMTETDDVMRSITEKKKITFYTGFDPTADSLHIGNLLTLMVMSHLKK 94

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI----EKIKGIFSSFIKYGTGKT 121
            GH PI+++GG T++IGDPS +   R ++    I+ N+    E I+ I            
Sbjct: 95  HGHNPIAIVGGATALIGDPSGKSTDRPVLSEDFIENNLVYLRENIRTILGE--------- 145

Query: 122 DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQS---LSFLEFNYMI 178
           D  +LNN  W  ++  I+ LR+IG++F V  M+  + +++RL  E     +S+ EF Y +
Sbjct: 146 DTTILNNIDWNKNLSIINFLRDIGTYFRVGTMIKKDFIQNRLNSENDDSGISYTEFTYSL 205

Query: 179 LQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMG 238
           LQA DF  L  N  C LQ+GGSDQWGNI+ GIDL  +    +   LT PLLT + G K+G
Sbjct: 206 LQANDFAHLYHNNKCELQIGGSDQWGNIVSGIDLIRKRYKGQGMGLTIPLLTNSEGQKLG 265

Query: 239 KTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEIN 296
           K+   +IWL+   TS Y F+QYW  I DADV    K  T LP++EI  +     Q   + 
Sbjct: 266 KSEGNSIWLSPHKTSSYMFYQYWIQIADADVEKLLKLFTYLPLNEISEIVSQHNQNPHLR 325

Query: 297 EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLI 356
            A+K ++ E+T +VHG++  E+A       F    +S  +  +  + + +  G  +  L+
Sbjct: 326 TAQKKLSEEVTRLVHGQKGLEEALLTTEILFGK--YSDALSNLDENNNCIIEGKSVGDLL 383

Query: 357 VKAGFAT---------------------STNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
            KA + +                     S+ +AR+      + +N+ +I++ K+ +    
Sbjct: 384 SKANYISLSKSKYLNQKIVNILSEVSGISSTQARKLFTDKVVFMNSKLINDPKITLAENQ 443

Query: 396 FDSTGNIKLSFGKKN-HII 413
             S   I L  GKKN H+I
Sbjct: 444 LISNHFILLKSGKKNFHLI 462


>gi|311742398|ref|ZP_07716207.1| tyrosine--tRNA ligase [Aeromicrobium marinum DSM 15272]
 gi|311314026|gb|EFQ83934.1| tyrosine--tRNA ligase [Aeromicrobium marinum DSM 15272]
          Length = 418

 Score =  236 bits (602), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 144/412 (34%), Positives = 220/412 (53%), Gaps = 18/412 (4%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L  L  RG +   ++   L    S G VT Y+G+D TA SLH G+L Q++    LQ  GH
Sbjct: 5   LDDLVARGLVAHSTDIEALREALSAGPVTYYVGFDPTAPSLHVGNLLQILTARRLQLAGH 64

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQE-IQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           +P+ L+GG T +IGDP  ++   R M S+E + + +++I+   + F+ +  G   A ++N
Sbjct: 65  RPLILVGGSTGLIGDP--KESGERSMNSRETVADWVDRIRAQVTRFVDF-DGDNAATVVN 121

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W   +  ID LR+IG  F VNRML+ + V SRL  E  +S+ EF+Y++LQ+ D++EL
Sbjct: 122 NLDWTGQLNTIDFLRDIGKHFPVNRMLARDVVSSRL--ESGISYTEFSYVLLQSLDYLEL 179

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            + + C LQ GGSDQWGN+  G++L  R    ++ A  +PL+T A GTK GKT SG IWL
Sbjct: 180 HRRHGCVLQTGGSDQWGNLTAGVELVRRADGDRVHAFATPLITKADGTKFGKTESGTIWL 239

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM----AKLQGKEINEAKKIIA 303
           + ++ SPY F Q W   +D+ V  +  + T L +SEID +    A+  G+ + + +  +A
Sbjct: 240 DPDLMSPYAFHQTWIQAEDSKVGEYLAQFTFLELSEIDALMAEHAEAPGRRVPQRR--LA 297

Query: 304 TEITTMVHGREEAEKAATAAMECF------DMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            E+TT+VHG  EAE A  AA   F      D+   +            V     +   +V
Sbjct: 298 RELTTIVHGAAEAEAAEHAASALFGKGELSDLPEATLAAALTEAGVATVPADASVTDALV 357

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
             G   S + ARR +      +NN  + +    +      + G   L  GK+
Sbjct: 358 ACGLVDSRSAARRTVLEGGAYMNNQRVDDPDAPVADAPRLAGGWTVLRRGKR 409


>gi|270289145|ref|ZP_06195447.1| tyrosyl-tRNA synthetase [Chlamydia muridarum Weiss]
          Length = 408

 Score =  236 bits (601), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 129/364 (35%), Positives = 206/364 (56%), Gaps = 19/364 (5%)

Query: 36  VTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMR 95
           V+AY+G+D TA SLH GH   +  L  L   G  PI+L+GG T +IGDPS +   R ++ 
Sbjct: 28  VSAYLGFDPTAPSLHIGHWIGICFLRRLSAYGITPIALVGGATGMIGDPSGKSVERSLLD 87

Query: 96  SQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLS 155
            +++ +N +KI+   ++++       D  ++NN  WL S+  +D LR+IG +F +  ML+
Sbjct: 88  QEQVLDNSKKIEVALANYL------PDIRIVNNADWLGSLSMVDFLRDIGKYFRLGSMLA 141

Query: 156 FESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER 215
            + V+ R+  E+ +S+ EF+Y++LQ+YDF  L K++   LQ GGSDQWGNI  GID   R
Sbjct: 142 KDVVKQRVYSEEGISYTEFSYLLLQSYDFAHLFKHHGVVLQCGGSDQWGNITSGIDYIRR 201

Query: 216 LKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKR 275
               + F LT PLLT + G K+GKT SG +WL+ E+TSPY  +QY+  + D ++   A+ 
Sbjct: 202 KGLGQAFGLTYPLLTDSKGKKIGKTESGTVWLDPELTSPYELFQYFLRLSDQEIPKIARM 261

Query: 276 LTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECF-------- 327
           LT L   E+  + K    +    K+ +A  I   VHG E   + A A  E F        
Sbjct: 262 LTLLDDDEVLALDKRLENDPQAVKRYVAEVIVKDVHGAEGLAQ-ALATTESFFANKGKNI 320

Query: 328 ---DMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSII 384
              +++   Q    I++++ +V  G   L ++V+ GF +S  EARR ++   + +N   +
Sbjct: 321 TESELAALVQSGVGINVARADVI-GKRWLDVVVQLGFCSSKGEARRLIQQRGLYVNQEPL 379

Query: 385 SNEK 388
            +E+
Sbjct: 380 IDEQ 383


>gi|15618276|ref|NP_224561.1| tyrosyl-tRNA synthetase [Chlamydophila pneumoniae CWL029]
 gi|4376637|gb|AAD18505.1| tyrosyl tRNA Synthetase [Chlamydophila pneumoniae CWL029]
          Length = 422

 Score =  236 bits (601), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 142/424 (33%), Positives = 220/424 (51%), Gaps = 31/424 (7%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           +L  L ER  +   +   E      +G + AY+G+D TA +LH GH   +  L  L   G
Sbjct: 14  WLQSLQERNILENFTAGLE----SVEGPIAAYLGFDPTAPALHIGHWIGICFLKRLAALG 69

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
             PI+L+GG T ++GDPS +   R ++++ E+ +N +KI        +Y  G T   ++N
Sbjct: 70  ITPIALVGGATGMVGDPSGKQSERSLLQTSEVFDNSQKITACLQ---RYLPGVT---LVN 123

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  I  ID L +IG  F + +ML  ++++ R+  ++ +S+ EF+Y+ILQ+YDF  L
Sbjct: 124 NADWLQEISLIDFLGDIGKHFRLGQMLVKDTIKQRVHSDEGISYTEFSYLILQSYDFYHL 183

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            KNY   LQ GGSDQWGNI  GID   R    + + LT PLLT A G K+GKT SG +WL
Sbjct: 184 FKNYGTILQCGGSDQWGNITSGIDFIRRKGLGQAYGLTYPLLTNAQGKKIGKTESGTVWL 243

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           + ++TSP+  +QY   + D  +   A+ LT L   EI  + +    +    K+ +A +I 
Sbjct: 244 DSDLTSPFELYQYLLRLPDDTIPKIARTLTLLSNEEIQDIDRRVQTDPVAVKEFVAQDIL 303

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTI---------------SISKDEVSRGMGL 352
           + +HG    E+A +        S+H  ++ ++               S+ K EV  G   
Sbjct: 304 SAIHGDLGLEEALSVT-----RSMHPGNLSSLSEKDFHELFAGGMGASLDKSEV-LGKRW 357

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           L L +  G   S  E RR ++   + INN  I+NE    + QD      + L+ GKK  +
Sbjct: 358 LDLFLVLGLCKSKGEIRRLIEQKGVYINNVPIANEHSVCEEQDICYGHYVLLAQGKKRKL 417

Query: 413 ICHL 416
           + +L
Sbjct: 418 VLYL 421


>gi|15834952|ref|NP_296711.1| tyrosyl-tRNA synthetase [Chlamydia muridarum Nigg]
 gi|270285124|ref|ZP_06194518.1| tyrosyl-tRNA synthetase [Chlamydia muridarum Nigg]
 gi|301336519|ref|ZP_07224721.1| tyrosyl-tRNA synthetase [Chlamydia muridarum MopnTet14]
 gi|14195229|sp|Q9PKX8|SYY_CHLMU RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|7190374|gb|AAF39195.1| tyrosyl-tRNA synthetase [Chlamydia muridarum Nigg]
          Length = 412

 Score =  235 bits (600), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 129/364 (35%), Positives = 206/364 (56%), Gaps = 19/364 (5%)

Query: 36  VTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMR 95
           V+AY+G+D TA SLH GH   +  L  L   G  PI+L+GG T +IGDPS +   R ++ 
Sbjct: 28  VSAYLGFDPTAPSLHIGHWIGICFLRRLSAYGITPIALVGGATGMIGDPSGKSVERSLLD 87

Query: 96  SQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLS 155
            +++ +N +KI+   ++++       D  ++NN  WL S+  +D LR+IG +F +  ML+
Sbjct: 88  QEQVLDNSKKIEVALANYL------PDIRIVNNADWLGSLSMVDFLRDIGKYFRLGSMLA 141

Query: 156 FESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER 215
            + V+ R+  E+ +S+ EF+Y++LQ+YDF  L K++   LQ GGSDQWGNI  GID   R
Sbjct: 142 KDVVKQRVYSEEGISYTEFSYLLLQSYDFAHLFKHHGVVLQCGGSDQWGNITSGIDYIRR 201

Query: 216 LKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKR 275
               + F LT PLLT + G K+GKT SG +WL+ E+TSPY  +QY+  + D ++   A+ 
Sbjct: 202 KGLGQAFGLTYPLLTDSKGKKIGKTESGTVWLDPELTSPYELFQYFLRLSDQEIPKIARM 261

Query: 276 LTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECF-------- 327
           LT L   E+  + K    +    K+ +A  I   VHG E   + A A  E F        
Sbjct: 262 LTLLDDDEVLALDKRLENDPQAVKRYVAEVIVKDVHGAEGLAQ-ALATTESFFANKGKNI 320

Query: 328 ---DMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSII 384
              +++   Q    I++++ +V  G   L ++V+ GF +S  EARR ++   + +N   +
Sbjct: 321 TESELAALVQSGVGINVARADVI-GKRWLDVVVQLGFCSSKGEARRLIQQRGLYVNQEPL 379

Query: 385 SNEK 388
            +E+
Sbjct: 380 IDEQ 383


>gi|227529733|ref|ZP_03959782.1| tyrosine--tRNA ligase [Lactobacillus vaginalis ATCC 49540]
 gi|227350334|gb|EEJ40625.1| tyrosine--tRNA ligase [Lactobacillus vaginalis ATCC 49540]
          Length = 417

 Score =  235 bits (600), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 152/423 (35%), Positives = 229/423 (54%), Gaps = 31/423 (7%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I+Q ++   L  L     +  Y G D T  SLH GHL   M+L   Q  GH P+
Sbjct: 7   LEWRGAINQTTDKEALKELTENKNIGLYCGTDPTGDSLHIGHLIPFMILKRFQLAGHHPV 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQEN----IEKIKGIFSSFIKYGTGKTDALMLN 127
            ++GGGT  IGDPS R   R +    +++ N     E++K +F        G  +  +++
Sbjct: 67  IIIGGGTGAIGDPSGRKTERTLQTESQLEHNKKALTEQMKKLF--------GTENFTIVD 118

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N TWL +   ID LR+ G  F+VN ML+ E V SRL  +  +SF EF Y ILQA DF+ L
Sbjct: 119 NYTWLKNFTMIDFLRDFGKLFNVNTMLNKEVVASRL--DSGISFTEFTYQILQAVDFLHL 176

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSGAI 245
            +N   +L++GGSDQWGNI  GIDL  +++ P  K++ LT PL+  A GTK GKT  GAI
Sbjct: 177 YQNNSVQLEIGGSDQWGNITAGIDLIHKVEGPDAKVYGLTIPLMLKADGTKFGKTAGGAI 236

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIA 303
           WL+ + TSPY F+Q+W N DD DVV + K  T L   EID +A+   KE    EA++ +A
Sbjct: 237 WLDPKKTSPYEFYQFWINQDDRDVVKYLKYFTFLSKDEIDELAEKVQKEPWKREAQRRLA 296

Query: 304 TEITTMVHGRE---EAEKAATAAM--ECFDMSIHS-----QHMPTISISKDEVSRGMGLL 353
            E+T  VHG E   EA++   A    +  D++        + +P++ ++ ++ +    +L
Sbjct: 297 EEVTKFVHGEEGLAEAQRITKALFSGDVADLTTEEIEQAFKDVPSVEVANEKKNI---IL 353

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            L+       S  +AR+ +++ AI IN   +++   +I          + +  GKK + +
Sbjct: 354 WLVDDTKIEPSRRQARQDVENGAIHINGEKVTDVDAEIDPSSHFDGKFVIVRRGKKRYFL 413

Query: 414 CHL 416
             +
Sbjct: 414 VRV 416


>gi|295098920|emb|CBK88009.1| tyrosyl-tRNA synthetase [Eubacterium cylindroides T2-87]
          Length = 412

 Score =  235 bits (599), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 141/384 (36%), Positives = 214/384 (55%), Gaps = 20/384 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG +  I++P   D + ++ + T YIG D TA SLH GH + L++   L+K GH PI
Sbjct: 7   LEWRGLVDNITSPEVKDAINNEKL-TFYIGTDPTADSLHIGHYSSLLMAKRLEKHGHHPI 65

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+GG T  IGDP    E R M+  + ++ N + +    S    +        M+NN  W
Sbjct: 66  MLVGGATGFIGDPKATGE-RNMLTQETLKANYDALHEQISKLWGFE-------MVNNLDW 117

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
              I  ID LR+ G FF+VN M++ E+V+ RL  +  +S+ EF+YMILQ+ DF+ L +  
Sbjct: 118 TKDISVIDFLRDYGKFFNVNYMINKETVKKRL--DTGISYTEFSYMILQSLDFLHLYQEK 175

Query: 192 DCRLQMGGSDQWGNIICGIDLGERL--KTPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
           +C LQ+GG DQWGNI  G++L  +      K + LT PL+T A GTK GK+ SG +WL+ 
Sbjct: 176 NCTLQIGGQDQWGNITSGLELIRKKCGADVKCYGLTMPLITKADGTKFGKSESGTVWLDA 235

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM-AKLQGKEINE-AKKIIATEIT 307
             TSPY  +Q+  N DD  V+ + K+LT L   +I+ +   LQ +     A+K +A+E+ 
Sbjct: 236 SKTSPYELYQFLFNTDDRKVIEYLKKLTFLTREQIEELEVSLQNEPHKRLAQKTLASEVV 295

Query: 308 TMVHGREEAEKAATAAMECFDMSIH----SQHMPTI-SISKDEVSRGMGLLTLIVKAGFA 362
             +HG+E  + A       F   I      Q +  I ++ K    +G  LL  +V++G A
Sbjct: 296 RDLHGQEGLDCALKITEALFKGKIQELTDDQKLDAIRNMEKLHCEQGKTLLETLVESGIA 355

Query: 363 TSTNEARRHLKSNAIKINNSIISN 386
           +S  EAR  +K N+I +N + I++
Sbjct: 356 SSRREAREWIKGNSIMVNGTKITD 379


>gi|297243606|ref|ZP_06927537.1| tyrosyl-tRNA synthetase [Gardnerella vaginalis AMD]
 gi|296888357|gb|EFH27098.1| tyrosyl-tRNA synthetase [Gardnerella vaginalis AMD]
          Length = 439

 Score =  235 bits (599), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 135/402 (33%), Positives = 215/402 (53%), Gaps = 24/402 (5%)

Query: 5   KSDFLSILSE---RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
           ++ F S+  E   RG I Q ++ ++L        +T Y GYD TA+SLH G+L QL+ + 
Sbjct: 9   EAGFASLFEELKWRGLISQSTDEQQLAQALDGEPLTYYCGYDPTAASLHIGNLVQLINMR 68

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN-IEKIKGIFSSFIKYGTGK 120
            LQ  GH PI+L+GG T +IGDP  R    R + S++I     E+++      +    G+
Sbjct: 69  HLQAAGHHPIALVGGATGLIGDP--RQSGERTLNSKDIVAGWAERLRKQIGRILPL-DGE 125

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
                ++N  W+  +  ID LR++G  F V  MLS + V  RL  ++ +SF EF+Y +LQ
Sbjct: 126 NPVRFVSNYDWVSKMSAIDFLRDVGKNFRVGTMLSKDIVARRLNSDEGISFAEFSYQVLQ 185

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
             DF+ L  NY+  LQ+GGSDQWGN+  G+DL  +++   +   TSP++T   G K GK+
Sbjct: 186 GNDFLYLFDNYNVTLQLGGSDQWGNLTSGMDLIRKVRGASVNVFTSPIITDNQGRKFGKS 245

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN--EA 298
              A+WL+  M SPY F+Q+W N  D +VV   K  T LP  EI+R+A+    +    EA
Sbjct: 246 EGNAMWLDPSMLSPYRFYQFWFNQPDDEVVKLLKVFTFLPKDEIERLAQQIQDDPGSREA 305

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECF--------DMSIHSQHMPTISISKDEVSRGM 350
           ++++A E+T+ VHG +   +A  A+   F        D       +  + +  ++ S   
Sbjct: 306 QRVLAWEVTSFVHGEDLTSQAIEASSALFGRGNLCNIDEQTLEAALDGVKVKAEDGSLDF 365

Query: 351 G-------LLTLIVKAGFATSTNEARRHLKSNAIKINNSIIS 385
                   ++   V AG   + +EARR +++  + +NN  +S
Sbjct: 366 AKAKVADRVVEAAVAAGLFRTVSEARRAIEAGGLYLNNERVS 407


>gi|282859934|ref|ZP_06269022.1| tyrosine--tRNA ligase [Prevotella bivia JCVIHMP010]
 gi|282587337|gb|EFB92554.1| tyrosine--tRNA ligase [Prevotella bivia JCVIHMP010]
          Length = 432

 Score =  235 bits (599), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 143/430 (33%), Positives = 228/430 (53%), Gaps = 27/430 (6%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG + Q+  P   + L  + +V+AY+G D TA SLH GHL  +M+L  LQ+ 
Sbjct: 3   NFVEELRWRGMLAQMM-PGTEEFLMKE-MVSAYLGTDPTADSLHIGHLCGIMMLRHLQRC 60

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY-GTGKTDALM 125
           GHKP  L+GG T +IGDPS + + R ++ ++ +  N E IK   S F+ +  T    A M
Sbjct: 61  GHKPYLLVGGATGMIGDPSGKSQERNLLDTETLYHNQEAIKKQVSKFLDFDSTEPNKAEM 120

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQS--LSFLEFNYMILQAYD 183
           +NN  W+    ++D  R +G   +VN M++ +SV+ RL  E S  LSF EF Y +LQ YD
Sbjct: 121 VNNYDWMKDFTFLDFARTVGKHITVNYMMAKDSVKRRLNGEASDGLSFTEFTYQLLQGYD 180

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERL--KTPKLFALTSPLLTTASGTKMGKTL 241
           F+   ++Y+ +LQ+GG+DQWGN+  G +L  R      + + LT PL+T A G K GKT 
Sbjct: 181 FLYQYQHYNIKLQLGGNDQWGNMTTGSELIRRTLGSEAEAYCLTCPLITKADGKKFGKTE 240

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEA--K 299
           SG IWL++  TSPY F+Q+W N+ D D   + K  T+L    I+ +     ++      +
Sbjct: 241 SGNIWLDRNRTSPYAFYQFWLNVSDDDAAKYIKIFTSLDRPTIEGLIAEHSEDPGRRTLQ 300

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDE 345
           + +A E+T MVH +E+ + A  A+   F  S                 + +P   +SK+ 
Sbjct: 301 RRLAEEVTRMVHSQEDLDMAIAASNILFGKSTKENLLQLDEQTFNDVFKDVPHFEVSKEL 360

Query: 346 VSRGMGLLTLIVKAGFA--TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
           +  G   + ++ + G     S +E R+ +K   + +N   ++     I   D      + 
Sbjct: 361 L--GQPAVEIMNQEGMTIFPSKSEMRKLVKGGGVSLNKEKLAAFDQVITADDLIDGKYLL 418

Query: 404 LSFGKKNHII 413
           +  GKKN+ +
Sbjct: 419 VQKGKKNYFL 428


>gi|298253918|ref|ZP_06977505.1| tyrosyl-tRNA synthetase [Gardnerella vaginalis 5-1]
 gi|297532061|gb|EFH71036.1| tyrosyl-tRNA synthetase [Gardnerella vaginalis 5-1]
          Length = 439

 Score =  234 bits (598), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 135/402 (33%), Positives = 215/402 (53%), Gaps = 24/402 (5%)

Query: 5   KSDFLSILSE---RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
           ++ F S+  E   RG I Q ++ ++L        +T Y GYD TA+SLH G+L QL+ + 
Sbjct: 9   EAGFASLFEELKWRGLISQSTDEQQLAQALDGEPLTYYCGYDPTAASLHIGNLVQLINMR 68

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN-IEKIKGIFSSFIKYGTGK 120
            LQ  GH PI+L+GG T +IGDP  R    R + S++I     E+++      +    G+
Sbjct: 69  HLQAAGHHPIALVGGATGLIGDP--RQSGERTLNSKDIVAGWAERLRKQIGQILPL-DGE 125

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
                ++N  W+  +  ID LR++G  F V  MLS + V  RL  ++ +SF EF+Y +LQ
Sbjct: 126 NPVRFVSNYDWVSKMSAIDFLRDVGKNFRVGTMLSKDIVARRLNSDEGISFAEFSYQVLQ 185

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
             DF+ L  NY+  LQ+GGSDQWGN+  G+DL  +++   +   TSP++T   G K GK+
Sbjct: 186 GNDFLYLFDNYNVTLQLGGSDQWGNLTSGMDLIRKVRGTSVNVFTSPIITDNQGRKFGKS 245

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN--EA 298
              A+WL+  M SPY F+Q+W N  D +VV   K  T LP  EI+R+A+    +    EA
Sbjct: 246 EGNAMWLDPSMLSPYRFYQFWFNQPDDEVVKLLKVFTFLPKDEIERLAQQIQDDPGSREA 305

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECF--------DMSIHSQHMPTISISKDEVSRGM 350
           ++++A E+T+ VHG +   +A  A+   F        D       +  + +  ++ S   
Sbjct: 306 QRVLAWEVTSFVHGEDLTNQAIEASSALFGRGDLCNIDEQTLEAALDGVKVKAEDGSLDF 365

Query: 351 G-------LLTLIVKAGFATSTNEARRHLKSNAIKINNSIIS 385
                   ++   V AG   + +EARR +++  + +NN  +S
Sbjct: 366 AKAKVADRVVEAAVAAGLFRTVSEARRAIEAGGLYLNNERVS 407


>gi|90962338|ref|YP_536254.1| tyrosyl-tRNA synthetase [Lactobacillus salivarius UCC118]
 gi|227891593|ref|ZP_04009398.1| tyrosyl-tRNA synthetase [Lactobacillus salivarius ATCC 11741]
 gi|301300696|ref|ZP_07206882.1| tyrosine--tRNA ligase [Lactobacillus salivarius ACS-116-V-Col5a]
 gi|123391329|sp|Q1WSF8|SYY_LACS1 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|90821532|gb|ABE00171.1| Tyrosyl-tRNA synthetase [Lactobacillus salivarius UCC118]
 gi|227866740|gb|EEJ74161.1| tyrosyl-tRNA synthetase [Lactobacillus salivarius ATCC 11741]
 gi|300214988|gb|ADJ79404.1| Tyrosyl-tRNA synthetase (Tyrosine--tRNA ligase) (TyrRS)
           [Lactobacillus salivarius CECT 5713]
 gi|300851701|gb|EFK79399.1| tyrosine--tRNA ligase [Lactobacillus salivarius ACS-116-V-Col5a]
          Length = 416

 Score =  234 bits (598), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 157/425 (36%), Positives = 234/425 (55%), Gaps = 26/425 (6%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + L  L+ RG I+Q+S+   L  L  +  V  Y G D T  SLH GHL   M+L   Q+ 
Sbjct: 2   NILDELAWRGAINQVSDEEGLRKLLDKKSVGLYCGVDPTGDSLHIGHLIPFMMLKRFQEA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+   ++GGGT  IGDPS +   R +   +++  N E +    +  +K+  GK +  ++
Sbjct: 62  GHRAHIIIGGGTGSIGDPSGKKSERVLQTMEQVHHNEEAL----TKQMKHLFGKDNITIV 117

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  I  +  LR+ G  F+VN ML+ E V SRL  E  +SF EF Y ILQ+ DF  
Sbjct: 118 NNRDWLSKIDLLGFLRDYGKLFNVNTMLNKEVVASRL--EVGISFTEFTYQILQSIDFHH 175

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLK--TPKLFALTSPLLTTASGTKMGKTLSGA 244
           L KN D +LQ+GG+DQWGNI  GIDL  +++    + +ALT PL+  A GTK GKT  GA
Sbjct: 176 LWKNNDVQLQIGGADQWGNITSGIDLIHKMEGSEAEAYALTIPLMLKADGTKFGKTAGGA 235

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI-DRMAKLQGK-EINEAKKII 302
           +WL+ E T+PY F+Q+W N DD DV+ + K  T L   EI D   K++ + E  EA++ +
Sbjct: 236 VWLDPEKTTPYEFYQFWLNQDDRDVIKYLKYFTFLSQEEIADLEEKVKTQPEKREAQRRL 295

Query: 303 ATEITTMVHGRE---EAE--KAATAAMECFDMSIHS-----QHMPTISISKDEVSRGMGL 352
           A E    VHG+E   EAE   AA  + E  D++        ++MP++ ++    +    +
Sbjct: 296 AEETVEFVHGKEAVKEAEHISAALFSGEVKDLTASEIEQGFKNMPSVEVT----AEPKNI 351

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ-DFDSTGNIKLSFGKKNH 411
           +  +V  G  +S  +AR  + + AI+IN   I + +  I    +FD    I +  GKK +
Sbjct: 352 VEWLVDTGIESSKRQAREDVTNGAIRINGDRIQDLEFTIDPSAEFDGKFVI-VRRGKKKY 410

Query: 412 IICHL 416
            +  +
Sbjct: 411 FLARV 415


>gi|307564822|ref|ZP_07627350.1| tyrosine--tRNA ligase [Prevotella amnii CRIS 21A-A]
 gi|307346544|gb|EFN91853.1| tyrosine--tRNA ligase [Prevotella amnii CRIS 21A-A]
          Length = 432

 Score =  234 bits (597), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 146/430 (33%), Positives = 228/430 (53%), Gaps = 31/430 (7%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG + Q+  P   + L  + +V+AY+G D TA SLH GHL  +M+L  LQ+ 
Sbjct: 3   NFVEELRWRGMLAQMM-PGTEEFLMKE-MVSAYLGTDPTADSLHIGHLCGIMMLRHLQRC 60

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY-GTGKTDALM 125
           GHKP  L+GG T +IGDPS + + R ++ +  +  N E IK   S F+ +  T    A M
Sbjct: 61  GHKPYLLVGGATGMIGDPSGKSQERNLLDADTLYHNQEAIKKQVSKFLDFDSTEPNKAEM 120

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQS--LSFLEFNYMILQAYD 183
           +NN  W+    ++D  R +G   +VN M++ +SV+ RL  E S  LSF EF Y +LQ YD
Sbjct: 121 VNNYDWMKDFTFLDFARTVGKHITVNYMMAKDSVKRRLNGEASDGLSFTEFTYQLLQGYD 180

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERL--KTPKLFALTSPLLTTASGTKMGKTL 241
           F+   ++Y  +LQ+GG+DQWGN+  G +L  R      + + LT PL+T A G K GKT 
Sbjct: 181 FLYQYQHYGIKLQLGGNDQWGNMTTGSELIRRTLGSEAEAYCLTCPLITKADGKKFGKTE 240

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKI 301
           SG IWL++  T+PY F+Q+W N+ D D   + K  T+L  + I+  A ++    +  ++I
Sbjct: 241 SGNIWLDRNRTTPYAFYQFWLNVSDDDAAKYIKIFTSLDQTTIE--ALIEEHSADPGRRI 298

Query: 302 ----IATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISK 343
               +A E+T MVH +E+ + A  A+   F  S                 + +P   ISK
Sbjct: 299 LQHRLAEEVTRMVHSQEDLDMAIAASNILFGKSTKENLLQLDEQTFTDVFKDVPHYEISK 358

Query: 344 DEVSRGMGLLTLIVKAGFA--TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
           D +  G   + ++ + G     S +E R+ +K   + +N   ++     I   D      
Sbjct: 359 DVL--GQPAVEVMNQEGMNIFPSKSEMRKLVKGGGVALNKEKLTAFDQVITANDLIDGKY 416

Query: 402 IKLSFGKKNH 411
           + +  GKKN+
Sbjct: 417 LLVQKGKKNY 426


>gi|327312729|ref|YP_004328166.1| tyrosine--tRNA ligase [Prevotella denticola F0289]
 gi|326944614|gb|AEA20499.1| tyrosine--tRNA ligase [Prevotella denticola F0289]
          Length = 432

 Score =  234 bits (597), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 142/428 (33%), Positives = 225/428 (52%), Gaps = 27/428 (6%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG + QI    E   L  + +V+AY+G D TA SLH GHL  +M+L  LQ+ 
Sbjct: 3   NFVEELRWRGMLAQIMPGTEE--LLQKEMVSAYLGTDPTADSLHIGHLCGIMMLRHLQRC 60

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY-GTGKTDALM 125
           GHKP  L+GG T +IGDPS + + R ++ ++ +  N E IK   S F+ + G+    A M
Sbjct: 61  GHKPYLLVGGATGMIGDPSGKSQERNLLDAETLYHNQEAIKKQVSKFLDFDGSEPNKAEM 120

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQAYD 183
           +NN  W+    ++D  R +G   +VN M++ +SV+ RL  E    LSF EF Y +LQ YD
Sbjct: 121 VNNYDWMKDFTFLDFARVVGKHITVNYMMAKDSVQKRLNGEARDGLSFTEFTYQLLQGYD 180

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERL--KTPKLFALTSPLLTTASGTKMGKTL 241
           F+   + +  +LQ+GG+DQWGN+  G +L  R      + + LT PL+T A G K GKT 
Sbjct: 181 FLYQYEKFGVKLQLGGNDQWGNMTTGTELIRRTLGSEAEAYCLTCPLITKADGKKFGKTE 240

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEA--K 299
           SG IWL++  T+PY F+Q+W N+ D D   + K  T+L    ID + +   ++      +
Sbjct: 241 SGNIWLDRNRTTPYAFYQFWLNVSDEDAEKYIKIFTSLEKDVIDALIEEHRQDPGRRTLQ 300

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDE 345
           + +A E+T MVH +++ + A  A+   F  S                 + +P   +SKD 
Sbjct: 301 RRLAEEVTRMVHSQDDLDMAIAASNILFGKSTKENLLQLDEQTFADVFKDVPHYEVSKDI 360

Query: 346 VSRGMGLLTLIVKAGFA--TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
           +  G   + +  + G     S +E R+ +KS  + +N   ++     +   D      + 
Sbjct: 361 L--GQPAVEVFNQEGMQIFPSKSEMRKLVKSGGVSLNKEKLAAFDQPVTADDLIDGKYLL 418

Query: 404 LSFGKKNH 411
           +  GKKN+
Sbjct: 419 VQKGKKNY 426


>gi|281421500|ref|ZP_06252499.1| tyrosine--tRNA ligase [Prevotella copri DSM 18205]
 gi|281404572|gb|EFB35252.1| tyrosine--tRNA ligase [Prevotella copri DSM 18205]
          Length = 433

 Score =  234 bits (597), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 128/324 (39%), Positives = 187/324 (57%), Gaps = 9/324 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG + QI  P   + L +  +V+AY+G D TA SLH GHL  +M+L  LQ+ 
Sbjct: 4   NFVEELKWRGMLAQIM-PGTEEYLNTH-MVSAYLGTDPTADSLHIGHLCGIMMLRHLQRC 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY-GTGKTDALM 125
           GHKP  L+GG T +IGDPS + + R ++ S+ +  N E IK   S F+ + G     A +
Sbjct: 62  GHKPYLLVGGATGMIGDPSGKSQERNLLDSETLYHNQEAIKKQVSKFLDFDGNEPNKAEL 121

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQAYD 183
           +NN  W+    ++D  R +G   +VN M++ +SV+ RL  E    LSF EF Y +LQ YD
Sbjct: 122 VNNYDWMKDFTFLDFARVVGKHITVNYMMAKDSVQKRLNGEARDGLSFTEFTYQLLQGYD 181

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERL--KTPKLFALTSPLLTTASGTKMGKTL 241
           F+   + Y  RLQ+GG+DQWGN+  G +L  R      + F LT PL+T A G K GKT 
Sbjct: 182 FLYQYEKYGVRLQLGGNDQWGNMTTGTELIHRTLGNDAECFCLTCPLITKADGKKFGKTE 241

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEA--K 299
           SG IWL++  T+PY F+Q+W N+ D D   + K  T L    ID + +   ++      +
Sbjct: 242 SGNIWLDRNRTTPYAFYQFWLNVSDDDAEKYIKIFTDLDKETIDALVEEHKQDPGRRVLQ 301

Query: 300 KIIATEITTMVHGREEAEKAATAA 323
           K +A E+T MVH +E+ + A  A+
Sbjct: 302 KRLAEEVTIMVHSQEDLDMAIAAS 325


>gi|260593358|ref|ZP_05858816.1| tyrosine--tRNA ligase [Prevotella veroralis F0319]
 gi|260534634|gb|EEX17251.1| tyrosine--tRNA ligase [Prevotella veroralis F0319]
          Length = 432

 Score =  234 bits (596), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 142/428 (33%), Positives = 224/428 (52%), Gaps = 27/428 (6%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG + QI    E   L  + +V+AY+G D TA SLH GHL  +M+L  LQ+ 
Sbjct: 3   NFVEELRWRGMLAQIMPGTEE--LLQKEMVSAYLGTDPTADSLHIGHLCGIMMLRHLQRC 60

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY-GTGKTDALM 125
           GHKP  L+GG T +IGDPS + + R ++ ++ +  N E IK   S F+ + G     A M
Sbjct: 61  GHKPYLLVGGATGMIGDPSGKSQERNLLDAETLYHNQEAIKKQVSKFLDFDGNEANKAEM 120

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQAYD 183
           +NN  W+    ++D  R +G   +VN M++ +SV+ RL  E    LSF EF Y +LQ YD
Sbjct: 121 VNNYDWMKDFTFLDFARVVGKHITVNYMMAKDSVQKRLNGEARDGLSFTEFTYQLLQGYD 180

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERL--KTPKLFALTSPLLTTASGTKMGKTL 241
           F+   + +  +LQ+GG+DQWGN+  G +L  R      + + LT PL+T A G K GKT 
Sbjct: 181 FLYQYEKFGVKLQLGGNDQWGNMTTGTELIRRTLGSEAEAYCLTCPLITKADGKKFGKTE 240

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEA--K 299
           SG IWL++  T+PY F+Q+W N+ D D   + K  T+L    ID + +   ++      +
Sbjct: 241 SGNIWLDRNRTTPYAFYQFWLNVSDDDAEKYIKIFTSLEKDVIDGLIEEHRQDPGRRTLQ 300

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDE 345
           + +A E+T MVH +E+ + A  A+   F  S                 + +P   +SKD 
Sbjct: 301 RRLAEEVTRMVHSQEDLDMAIAASNILFGKSTKENLLQLDEQTFADVFKDVPHYEVSKDV 360

Query: 346 VSRGMGLLTLIVKAGFA--TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
           +  G   + +  + G     S +E R+ +K   + +N   ++     +  +D      + 
Sbjct: 361 L--GQPAVDVFNQEGMQIFPSKSEMRKLVKGGGVSLNKEKLAAFDQPVTAEDLIDGKYLL 418

Query: 404 LSFGKKNH 411
           +  GKKN+
Sbjct: 419 VQKGKKNY 426


>gi|309803428|ref|ZP_07697523.1| tyrosine--tRNA ligase [Lactobacillus iners LactinV 11V1-d]
 gi|312871028|ref|ZP_07731130.1| tyrosine--tRNA ligase [Lactobacillus iners LEAF 3008A-a]
 gi|312872057|ref|ZP_07732132.1| tyrosine--tRNA ligase [Lactobacillus iners LEAF 2062A-h1]
 gi|312873438|ref|ZP_07733488.1| tyrosine--tRNA ligase [Lactobacillus iners LEAF 2052A-d]
 gi|325911290|ref|ZP_08173703.1| tyrosine--tRNA ligase [Lactobacillus iners UPII 143-D]
 gi|325913559|ref|ZP_08175924.1| tyrosine--tRNA ligase [Lactobacillus iners UPII 60-B]
 gi|329920834|ref|ZP_08277421.1| tyrosine--tRNA ligase [Lactobacillus iners SPIN 1401G]
 gi|308164592|gb|EFO66844.1| tyrosine--tRNA ligase [Lactobacillus iners LactinV 11V1-d]
 gi|311090947|gb|EFQ49341.1| tyrosine--tRNA ligase [Lactobacillus iners LEAF 2052A-d]
 gi|311092350|gb|EFQ50719.1| tyrosine--tRNA ligase [Lactobacillus iners LEAF 2062A-h1]
 gi|311093356|gb|EFQ51698.1| tyrosine--tRNA ligase [Lactobacillus iners LEAF 3008A-a]
 gi|325476850|gb|EGC80003.1| tyrosine--tRNA ligase [Lactobacillus iners UPII 143-D]
 gi|325477138|gb|EGC80285.1| tyrosine--tRNA ligase [Lactobacillus iners UPII 60-B]
 gi|328935614|gb|EGG32081.1| tyrosine--tRNA ligase [Lactobacillus iners SPIN 1401G]
          Length = 417

 Score =  234 bits (596), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 144/391 (36%), Positives = 206/391 (52%), Gaps = 25/391 (6%)

Query: 7   DFLSILSERGFIHQISNPREL-DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           D L  L  RG I+Q ++ + L + L     +T Y G D T  SLH GHL   M+L   Q 
Sbjct: 2   DILEDLKWRGAINQQTDEQGLREYLQQHKDLTLYCGTDPTGDSLHIGHLIPFMILKRFQM 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            G+ PI L+GG T  IGDPS R   R +   ++++ N + +            G  +  +
Sbjct: 62  AGYHPIILIGGATGAIGDPSGRKTERVLQSEEQVRRNEKSLTAQMEKLF----GTENFEI 117

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN +WL  +  +D LR+ G  F VN ML+ + V SRL     +S+ EF Y I+QA DF 
Sbjct: 118 VNNASWLSKLTLLDFLRDYGKLFQVNTMLNKDIVASRLA--TGISYTEFTYQIMQAIDFY 175

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK--LFALTSPLLTTASGTKMGKTLSG 243
            L KN +  LQ+GG DQWGNI  GIDL  R++      F LT PL+  + GTK GK+  G
Sbjct: 176 YLNKNKNVTLQIGGGDQWGNITGGIDLIHRIEGADHPAFGLTIPLMLKSDGTKFGKSAGG 235

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKI 301
           AIWL+ E TSPY F+Q+W N DD DV+ + K  T L   EI+ +A    KE  +  A++ 
Sbjct: 236 AIWLDPEKTSPYEFYQFWINQDDRDVIKYLKYFTFLSHQEIEDLAISVEKEPWKRLAQRK 295

Query: 302 IATEITTMVHGREEAEKAATAAMECF-----DMSIHS-----QHMPTISISKDEVSRGMG 351
           +A E+T  VHG      A       F     D+S+       ++ P + ISK+  +    
Sbjct: 296 LAEEVTKFVHGEAGLRDAQFITNALFEGNIKDLSVKQIEQGFKNAPYVEISKESKN---- 351

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNS 382
           L+ L+V+ G   S  +AR  + + AI +N +
Sbjct: 352 LVDLLVETGIEKSKRQAREDINNGAIYVNGT 382


>gi|50365404|ref|YP_053829.1| tyrosyl-tRNA synthetase [Mesoplasma florum L1]
 gi|81391721|sp|Q6F0M8|SYY_MESFL RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|50363960|gb|AAT75945.1| tyrosyl-tRNA synthetase [Mesoplasma florum L1]
          Length = 413

 Score =  234 bits (596), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 140/393 (35%), Positives = 209/393 (53%), Gaps = 29/393 (7%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG + QI+N   L    + G    Y G+D TA SLH GHL  ++ L    K G + I
Sbjct: 7   LEWRGLVKQITNEERLLKAQNDGAA-VYCGFDPTADSLHVGHLMMIVTLKRFDKAGFQAI 65

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+GGGT +IGDPSF+ + R++   ++++ +   I+      I       D    NN  W
Sbjct: 66  GLIGGGTGMIGDPSFKADERKLQTDEQVKFHATAIQNQLLRIIP------DVTFANNVDW 119

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L ++  ID LR++G  F+++ +L+ +S+ +R+     LS  EF+Y +LQAYDF  L  N+
Sbjct: 120 LGNMSLIDFLRDVGKDFNISYLLNKDSIATRI--STGLSVTEFSYTMLQAYDFYNLYINH 177

Query: 192 DCRLQMGGSDQWGNIICGID-LGERLKTPKLFA--LTSPLLTTASGTKMGKTLSGAIWLN 248
           +C++Q+GGSDQWGNI  G D +  R+ +    A   T PLLT + G K GKT SGA+WL+
Sbjct: 178 NCKVQIGGSDQWGNITSGTDYISTRVGSANTEAAGFTIPLLTKSDGQKFGKTESGAVWLD 237

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATEI 306
              TS Y+F+Q+W N DD D V   K LT L   EID +     +   +   +K +A+EI
Sbjct: 238 SNKTSVYDFYQFWINQDDNDCVKMLKYLTFLTKEEIDELEAKHKEAPHLRTMQKTLASEI 297

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLI 356
           T  VHG +E  KA       F  +I +          + +PTI + K   +     +  I
Sbjct: 298 TKFVHGDKELNKAIKLTDAFFTGNILNLDDDLLELAIKSIPTIQLEKTTSA-----IDAI 352

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKL 389
           V    A+S  EAR  + + AI  N+  + +E +
Sbjct: 353 VNVNAASSKREAREFINAKAISFNDVAVQDENM 385


>gi|312875341|ref|ZP_07735349.1| tyrosine--tRNA ligase [Lactobacillus iners LEAF 2053A-b]
 gi|311089175|gb|EFQ47611.1| tyrosine--tRNA ligase [Lactobacillus iners LEAF 2053A-b]
          Length = 417

 Score =  234 bits (596), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 145/391 (37%), Positives = 208/391 (53%), Gaps = 25/391 (6%)

Query: 7   DFLSILSERGFIHQISNPREL-DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           D L  L  RG I+Q ++ + L + L     +T Y G D T  SLH GHL   M+L   Q 
Sbjct: 2   DILEDLKWRGAINQQTDEQGLREYLQQHKDLTLYCGTDPTGDSLHIGHLIPFMILKRFQM 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            G+ PI L+GG T  IGDPS R   R +   ++++ N    +   +S ++   G  +  +
Sbjct: 62  AGYHPIILIGGATGAIGDPSGRKTERVLQSEEQVRHN----EKCLTSQMEKLFGTENFEI 117

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN +WL  +  +D LR+ G  F VN ML+ + V SRL     +S+ EF Y I+QA DF 
Sbjct: 118 VNNASWLSKLTLLDFLRDYGKLFQVNTMLNKDIVASRLA--TGISYTEFTYQIMQAIDFY 175

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK--LFALTSPLLTTASGTKMGKTLSG 243
            L KN +  LQ+GG DQWGNI  GIDL  R++      F LT PL+  + GTK GK+  G
Sbjct: 176 YLNKNKNVTLQIGGGDQWGNITGGIDLIHRIEGADHPAFGLTIPLMLKSDGTKFGKSAGG 235

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKI 301
           AIWL+ E TSPY F+Q+W N DD DV+ + K  T L   EI+ +A    KE  +  A++ 
Sbjct: 236 AIWLDPEKTSPYEFYQFWINQDDRDVIKYLKYFTFLSHQEIEDLAISVEKEPWKRLAQRK 295

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMG 351
           +A E+T  VHG      A       F+ +I            ++ P + ISK+  +    
Sbjct: 296 LAEEVTKFVHGEAGLRDAQFITNALFEGNIKELSVKQIEQGFKNAPYVEISKESKN---- 351

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNS 382
           L+ L+V+ G   S  +AR  + + AI +N S
Sbjct: 352 LVDLLVETGIEKSKRQAREDINNGAIYVNGS 382


>gi|309805131|ref|ZP_07699184.1| tyrosine--tRNA ligase [Lactobacillus iners LactinV 09V1-c]
 gi|309809022|ref|ZP_07702896.1| tyrosine--tRNA ligase [Lactobacillus iners SPIN 2503V10-D]
 gi|308165585|gb|EFO67815.1| tyrosine--tRNA ligase [Lactobacillus iners LactinV 09V1-c]
 gi|308170678|gb|EFO72697.1| tyrosine--tRNA ligase [Lactobacillus iners SPIN 2503V10-D]
          Length = 417

 Score =  234 bits (596), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 145/391 (37%), Positives = 208/391 (53%), Gaps = 25/391 (6%)

Query: 7   DFLSILSERGFIHQISNPREL-DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           D L  L  RG I+Q ++ + L + L     +T Y G D T  SLH GHL   M+L   Q 
Sbjct: 2   DILEDLKWRGAINQQTDEQGLREYLQQHKDLTLYCGTDPTGDSLHIGHLIPFMILKRFQM 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            G+ PI L+GG T  IGDPS R   R +   ++++ N    +   +S ++   G  +  +
Sbjct: 62  AGYHPIILIGGATGAIGDPSGRKTERVLQSEEQVRHN----EKCLTSQMEKLFGTENFEI 117

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN +WL  +  +D LR+ G  F VN ML+ + V SRL     +S+ EF Y I+QA DF 
Sbjct: 118 VNNASWLSKLTLLDFLRDYGKLFQVNTMLNKDIVASRLA--TGISYTEFTYQIMQAIDFY 175

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK--LFALTSPLLTTASGTKMGKTLSG 243
            L KN +  LQ+GG DQWGNI  GIDL  R++      F LT PL+  + GTK GK+  G
Sbjct: 176 YLNKNKNVTLQIGGGDQWGNITGGIDLIHRIEGADHPAFGLTIPLMLKSDGTKFGKSAGG 235

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKI 301
           AIWL+ E TSPY F+Q+W N DD DV+ + K  T L   EI+ +A    KE  +  A++ 
Sbjct: 236 AIWLDPEKTSPYEFYQFWINQDDRDVIKYLKYFTFLSHQEIEDLAISVEKEPWKRLAQRK 295

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMG 351
           +A E+T  VHG      A       F+ +I            ++ P + ISK+  +    
Sbjct: 296 LAEEVTKFVHGEAGLRDAQFITNALFEGNIKELSVKQIEQGFKNAPYVEISKESKN---- 351

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNS 382
           L+ L+V+ G   S  +AR  + + AI +N S
Sbjct: 352 LVDLLVETGIEKSKRQAREDINNGAIYVNGS 382


>gi|282879066|ref|ZP_06287826.1| tyrosine--tRNA ligase [Prevotella buccalis ATCC 35310]
 gi|281298800|gb|EFA91209.1| tyrosine--tRNA ligase [Prevotella buccalis ATCC 35310]
          Length = 433

 Score =  233 bits (595), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 143/430 (33%), Positives = 222/430 (51%), Gaps = 27/430 (6%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG + Q+    E   L  + +V+AY+G D TA SLH GHL  +M+L  LQ+ 
Sbjct: 4   NFVEELKWRGMLAQMMPGTE--ELLEKELVSAYLGTDPTADSLHIGHLCGIMMLRHLQRC 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY-GTGKTDALM 125
           GHKP  L+GG T +IGDPS +   R ++ +  +  N E IK   S F+ + G     A +
Sbjct: 62  GHKPYLLLGGATGMIGDPSGKSLERNLLDTDTLYHNQEAIKQQVSKFLDFDGDTPNKAEL 121

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQS--LSFLEFNYMILQAYD 183
           +NN  W+    ++D  RE+G   +VN M++ +SV+ RL  E S  LSF EF Y +LQ YD
Sbjct: 122 VNNYDWMKDFTFLDFAREVGKHITVNYMMAKDSVKKRLNGEASDGLSFTEFTYQLLQGYD 181

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERL--KTPKLFALTSPLLTTASGTKMGKTL 241
           F+ L + +  +LQ+GG+DQWGN+  G +L  R        + LT PL+T A G K GKT 
Sbjct: 182 FLHLYQKHGIKLQLGGNDQWGNMTTGTELIRRTLGAEENAYCLTCPLITKADGKKFGKTE 241

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEA--K 299
           +G IWL++  T+PY F+Q+W N+ D D   + K  T+L    I+ +     ++      +
Sbjct: 242 NGNIWLDRNRTTPYAFYQFWLNVSDDDAEKYIKIFTSLERETIEALVAEHQQDPGRRVLQ 301

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDE 345
           K +A E+T MVH +E+ + A  A+   F  +                   +P   I K++
Sbjct: 302 KRLAEEVTVMVHSQEDLDMAIEASNILFGKATKESLRKLDEATFLDVFNGVPQYEIDKNQ 361

Query: 346 VSRGMGLLTLIVKAGFA--TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
           +  G   + L  + G     S  E R+ +K   + +N   +S+    I   D      + 
Sbjct: 362 L--GSTAVDLFNQEGMEMFPSKGEMRKLVKGGGVSLNKEKLSSFDQVITADDLIDGKYLL 419

Query: 404 LSFGKKNHII 413
           +  GKKN+ +
Sbjct: 420 VQRGKKNYFL 429


>gi|302346026|ref|YP_003814379.1| tyrosine--tRNA ligase [Prevotella melaninogenica ATCC 25845]
 gi|302150275|gb|ADK96537.1| tyrosine--tRNA ligase [Prevotella melaninogenica ATCC 25845]
          Length = 432

 Score =  233 bits (595), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 142/428 (33%), Positives = 224/428 (52%), Gaps = 27/428 (6%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG + Q+    E   +  + +V+AY+G D TA SLH GHL  +M+L  LQ+ 
Sbjct: 3   NFVEELRWRGMLAQMMPGTEE--MLQKEMVSAYLGTDPTADSLHIGHLCGIMMLRHLQRC 60

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY-GTGKTDALM 125
           GHKP  L+GG T +IGDPS + + R ++ ++ +  N E IK   S F+ + G     A M
Sbjct: 61  GHKPYLLVGGATGMIGDPSGKSQERNLLDTETLYHNQEAIKKQVSKFLDFDGNEPNKAEM 120

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQAYD 183
           +NN  W+    ++D  R +G   +VN M++ +SV+ RL  E    LSF EF Y +LQ YD
Sbjct: 121 VNNYDWMKDFTFLDFARLVGKHITVNYMMAKDSVKKRLSGESRDGLSFTEFTYQLLQGYD 180

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERL--KTPKLFALTSPLLTTASGTKMGKTL 241
           F+ L + +  +LQ+GG+DQWGN+  G +L  R      + + LT PL+T A G K GKT 
Sbjct: 181 FLYLFEKFGVKLQLGGNDQWGNMTTGTELIRRTLGNETETYCLTCPLITKADGKKFGKTE 240

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEA--K 299
           SG IWL++  T+PY F+Q+W N+ D D   + K  T+L    ID + +   ++      +
Sbjct: 241 SGNIWLDRNRTTPYAFYQFWLNVSDDDAEKYIKIFTSLEKDVIDNLIEEHRQDPGRRTLQ 300

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDE 345
             +A E+T MVH +E+ + A  A+   F  S                 + +P   +SKD 
Sbjct: 301 YRLAEEVTRMVHSQEDLDMAIAASNILFGKSTKENLLQLDEQTFTDVFKDVPHYEVSKDV 360

Query: 346 VSRGMGLLTLIVKAGFA--TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
           +  G   + +  + G     S +E R+ +K   + +N   ++     I  +D      + 
Sbjct: 361 L--GQPAVDVFNQEGMQIFPSKSEMRKLVKGGGVALNKEKLAAFDQPITAEDLIDGKYLL 418

Query: 404 LSFGKKNH 411
           +  GKKN+
Sbjct: 419 VQKGKKNY 426


>gi|223985754|ref|ZP_03635798.1| hypothetical protein HOLDEFILI_03104 [Holdemania filiformis DSM
           12042]
 gi|223962264|gb|EEF66732.1| hypothetical protein HOLDEFILI_03104 [Holdemania filiformis DSM
           12042]
          Length = 429

 Score =  233 bits (595), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 141/411 (34%), Positives = 214/411 (52%), Gaps = 20/411 (4%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I  +S+P EL    + G +T YIG D T  SLH GH +  ++   L+  GH PI
Sbjct: 28  LEWRGLIKDVSSP-ELREKLNAGGMTFYIGTDPTGDSLHIGHFSSFLISKRLKDAGHNPI 86

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+GGGT +IGDP   D  R M+  +E+  N E +K        +        ++NN  W
Sbjct: 87  LLVGGGTGLIGDPK-PDAERPMVTKEEVNHNYECLKKQAEKVFGFE-------VVNNYDW 138

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
              I +ID LR+ G +F++N ML+ + VR RL  +  +++ EF+YM++QA DF  L +N 
Sbjct: 139 YKDINFIDFLRDYGKYFNINYMLNKDIVRRRL--DAGITYTEFSYMLMQAMDFWWLHENK 196

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
            C LQ+ G DQWGNI  GI+L  +    + +  T PLLT + GTK GKT   AIWL+   
Sbjct: 197 GCTLQVAGQDQWGNITAGIELIRKKTGKEAYGFTMPLLTKSDGTKFGKTNGHAIWLDINK 256

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE--INEAKKIIATEITTM 309
           TS Y  +Q++ N +D  V+ + K LT L   EI+ + +    E  + EA K +A E+ T 
Sbjct: 257 TSAYEMYQFFINSEDNKVIDYLKFLTFLSREEIEALEEKNRTEPHLREAHKTLAKEVITF 316

Query: 310 VHGREEAEKAATAAMECF-----DMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           +HG E    A   A   F     D+++         + +  +     LL ++V  G A S
Sbjct: 317 IHGEEAYNTAIKIAQTLFGGNLKDLTVEELKQGISDMPRFTIEDKQPLLDVLVATGIAKS 376

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQI-KLQDFDSTGNIKLSFGKKNHIIC 414
             E R  +   +I++N   +++    + + + F+    I L  GKKN+ +C
Sbjct: 377 KREGREWIAGGSIQVNGEKVTDPMTPVCRSEAFNQEFTI-LRKGKKNYFVC 426


>gi|259501232|ref|ZP_05744134.1| tyrosine-tRNA ligase [Lactobacillus iners DSM 13335]
 gi|302191040|ref|ZP_07267294.1| tyrosyl-tRNA synthetase [Lactobacillus iners AB-1]
 gi|259167359|gb|EEW51854.1| tyrosine-tRNA ligase [Lactobacillus iners DSM 13335]
          Length = 417

 Score =  233 bits (594), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 145/391 (37%), Positives = 208/391 (53%), Gaps = 25/391 (6%)

Query: 7   DFLSILSERGFIHQISNPREL-DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           D L  L  RG I+Q ++ + L + L     +T Y G D T  SLH GHL   M+L   Q 
Sbjct: 2   DILEDLKWRGAINQQTDEQGLREYLQQHKDLTLYCGTDPTGDSLHIGHLIPFMILKRFQM 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            G+ PI L+GG T  IGDPS R   R +   ++++ N    +   +S ++   G  +  +
Sbjct: 62  AGYHPIILIGGATGAIGDPSGRKTERVLQSEEQVRHN----EKCLTSQMEKLFGTENFEI 117

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN +WL  +  +D LR+ G  F VN ML+ + V SRL     +S+ EF Y I+QA DF 
Sbjct: 118 VNNASWLSKLTLLDFLRDYGKLFQVNTMLNKDIVASRLA--TGISYTEFTYQIMQAIDFY 175

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK--LFALTSPLLTTASGTKMGKTLSG 243
            L KN +  LQ+GG DQWGNI  GIDL  R++      F LT PL+  + GTK GK+  G
Sbjct: 176 YLNKNKNVTLQIGGGDQWGNITGGIDLIHRIEGADHPAFGLTIPLMLKSDGTKFGKSAGG 235

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKI 301
           AIWL+ E TSPY F+Q+W N DD DV+ + K  T L   EI+ +A    KE  +  A++ 
Sbjct: 236 AIWLDPEKTSPYEFYQFWINQDDRDVIKYLKYFTFLSHQEIEDLAISVEKEPWKRLAQRK 295

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMG 351
           +A E+T  VHG      A       F+ +I            ++ P + ISK+  +    
Sbjct: 296 LAEEVTKFVHGEAGLRDAQFITNALFEGNIMELSVKQIEQGFKNAPYVEISKESKN---- 351

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNS 382
           L+ L+V+ G   S  +AR  + + AI +N S
Sbjct: 352 LVDLLVETGIEKSKRQAREDINNGAIYVNGS 382


>gi|291456438|ref|ZP_06595828.1| tyrosine--tRNA ligase [Bifidobacterium breve DSM 20213]
 gi|291381715|gb|EFE89233.1| tyrosine--tRNA ligase [Bifidobacterium breve DSM 20213]
          Length = 440

 Score =  233 bits (594), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 140/422 (33%), Positives = 220/422 (52%), Gaps = 41/422 (9%)

Query: 5   KSDFLSILSE---RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
           ++ F ++L E   RG I Q ++   L    +   +T Y G+D TA+SLH G+L QL+ + 
Sbjct: 9   EAGFNTLLEELEWRGLISQSTDRDRLAEALNGEPITYYCGFDPTAASLHIGNLVQLINMR 68

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN-IEKIKGIFSSFIKYGTGK 120
            LQ   H PI+L+GG T +IGDP  R    R +  +++     +++K      ++   G 
Sbjct: 69  HLQLACHHPIALVGGATGLIGDP--RQSGERTLNPKDVVAGWADRLKNQIGGILET-EGA 125

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
                ++N  W  S+  ID LR++G  F +  ML+ ++V  RL  E+ +SF EF+Y +LQ
Sbjct: 126 NPVRFVSNYDWTASMTVIDFLRDVGKNFRLGTMLAKDTVARRLNSEEGISFTEFSYQVLQ 185

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
             DF+ L   Y C L++GGSDQWGN+  G+DL  +++   +   TSP++T ASG K GK+
Sbjct: 186 GNDFLHLFDEYHCTLELGGSDQWGNLTSGLDLIHKVRGVDVNVFTSPIITDASGKKFGKS 245

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ----GKEIN 296
              A+WL+  M SPY F+Q+W N  D ++ S  K  T LP +EI+R+ +      GK   
Sbjct: 246 EGNAVWLDATMLSPYKFYQFWINRPDVEMESLLKAFTFLPKAEIERLVEESKTNPGKR-- 303

Query: 297 EAKKIIATEITTMVHGREEAEKAATAAMECFD----------------------MSIHSQ 334
           EA+K +A E+T+ VHG    + A  A+   F                       +  + +
Sbjct: 304 EAQKTLAWEVTSFVHGEAATQAAIDASGALFGRGGNLEDIDEETLESVLDGFKVVDENGE 363

Query: 335 HMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
           H+  +S   D V      +     AG   S +EARR +KS  + +NN+ I +E+  +   
Sbjct: 364 HVFPVSKPGDRV------IDAAQAAGLFKSASEARRAIKSGGVYLNNNRIEDEEQVLAEA 417

Query: 395 DF 396
           DF
Sbjct: 418 DF 419


>gi|288803474|ref|ZP_06408906.1| tyrosine--tRNA ligase [Prevotella melaninogenica D18]
 gi|288334084|gb|EFC72527.1| tyrosine--tRNA ligase [Prevotella melaninogenica D18]
          Length = 432

 Score =  233 bits (594), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 141/428 (32%), Positives = 224/428 (52%), Gaps = 27/428 (6%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG + Q+    E   +  + +V+AY+G D TA SLH GHL  +M+L  LQ+ 
Sbjct: 3   NFVEELRWRGMLAQMMPGTEE--MLQKEMVSAYLGTDPTADSLHIGHLCGIMMLRHLQRC 60

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY-GTGKTDALM 125
           GHKP  L+GG T +IGDPS + + R ++ ++ +  N E IK   S F+ + G     A M
Sbjct: 61  GHKPYLLVGGATGMIGDPSGKSQERNLLDTETLYHNQEAIKKQVSKFLDFDGNEPNKAEM 120

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQAYD 183
           +NN  W+    ++D  R +G   +VN M++ +SV+ RL  E    LSF EF Y +LQ YD
Sbjct: 121 VNNYDWMKDFTFLDFARLVGKHITVNYMMAKDSVKKRLSGESHDGLSFTEFTYQLLQGYD 180

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERL--KTPKLFALTSPLLTTASGTKMGKTL 241
           F+ L + +  +LQ+GG+DQWGN+  G +L  R      + + LT PL+T A G K GKT 
Sbjct: 181 FLYLFEKFGVKLQLGGNDQWGNMTTGTELIRRTLGNETETYCLTCPLITKADGKKFGKTE 240

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEA--K 299
           SG IWL++  T+PY F+Q+W N+ D D   + K  T+L    ID + +   ++      +
Sbjct: 241 SGNIWLDRNRTTPYAFYQFWLNVSDDDAEKYIKIFTSLEKDVIDNLIEEHRQDPGRRTLQ 300

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDE 345
             +A E+T MVH +E+ + A  A+   F  S                 + +P   +SKD 
Sbjct: 301 YRLAEEVTRMVHSQEDLDMAIAASNILFGKSTKENLLQLDEQTFTDVFKDVPHYEVSKDV 360

Query: 346 VSRGMGLLTLIVKAGFA--TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
           +  G   + +  + G     S +E R+ +K   + +N   ++     +  +D      + 
Sbjct: 361 L--GQPAVDVFNQEGMQIFPSKSEMRKLVKGGGVALNKEKLAAFDQPVTAEDLIDGKYLL 418

Query: 404 LSFGKKNH 411
           +  GKKN+
Sbjct: 419 VQKGKKNY 426


>gi|332685978|ref|YP_004455752.1| tyrosyl-tRNA synthetase [Melissococcus plutonius ATCC 35311]
 gi|332369987|dbj|BAK20943.1| tyrosyl-tRNA synthetase [Melissococcus plutonius ATCC 35311]
          Length = 418

 Score =  233 bits (593), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 138/389 (35%), Positives = 213/389 (54%), Gaps = 23/389 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L+ R  I+Q ++ + L     +  ++ Y G D T  S+H GHL   M++   Q  GH P 
Sbjct: 7   LTWRDAINQQTDAQGLREQTEEASISLYCGVDPTGDSMHIGHLIPFMMMKRFQLAGHHPY 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+GGGT  IGDPS R   R +   +++Q N++ +       +K      +   +NN  W
Sbjct: 67  ILIGGGTGTIGDPSGRKTERVLQTMEQVQHNVDSLT---KQMLKLFGKDANVTFVNNYDW 123

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L  I  ++ LR+ G  F++N ML+ + V SRL  E  +SF EF Y ILQ+ DF+ L K +
Sbjct: 124 LSKISLLEFLRDYGKNFNINTMLAKDIVASRL--EVGISFTEFTYQILQSIDFLHLYKTF 181

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPK--LFALTSPLLTTASGTKMGKTLSGAIWLNK 249
           + +LQ+GG+DQWGNI  G+DL  +L+ P+  +F LT PL+  A GTK GKT  GA+WL+ 
Sbjct: 182 NVQLQIGGADQWGNITAGLDLIRKLEGPETNVFGLTIPLMLKADGTKFGKTAGGAVWLDA 241

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATEIT 307
           + TSP+ F+Q+W N DD DVV + K  T L  +EI+ +A+      E  EA++ +A E+T
Sbjct: 242 KKTSPFEFYQFWLNQDDRDVVKYLKFFTFLSQAEIEELAEKIKTNPEKREAQRRLAEEVT 301

Query: 308 TMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIV 357
             VH +EE  +A       F  +I            + MPT+ IS    S+   ++ +++
Sbjct: 302 RFVHSQEELAEAQKITAALFSGNIKELNAQEIEQGFEKMPTVEIS----SKPENIVDMLI 357

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISN 386
                 S  +AR  + + AI IN   +++
Sbjct: 358 STKIEPSKRQAREDISNGAISINGDKVTD 386


>gi|48290318|emb|CAF33979.1| tyrosyl t-RNA synthetase [Enterococcus durans]
          Length = 418

 Score =  233 bits (593), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 151/423 (35%), Positives = 226/423 (53%), Gaps = 29/423 (6%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L+ R  I+Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  GH P 
Sbjct: 7   LTWRDAINQQTSEERLRELVDEKSISLYCGVDPTGDSMHIGHLIPFMMMKRFQLAGHHPY 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK-TDALMLNNET 130
            L+GGGT  IGDPS R   R +   +++Q N++ +    S+ ++   GK  +   +NN  
Sbjct: 67  ILIGGGTGTIGDPSGRKTERVLQTMEQVQHNVDAL----SNQMRKLFGKDANITFVNNYD 122

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           WL  I  ++ LR+ G  F++N ML+ + V SRL  E  +SF EF Y ILQ+ DF+ L K 
Sbjct: 123 WLSKISLLEFLRDYGKNFNINTMLAKDIVASRL--EVGISFTEFTYQILQSIDFLHLHKT 180

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKL--FALTSPLLTTASGTKMGKTLSGAIWLN 248
           +D +LQ+GG+DQWGNI  G+DL  +L+ P+   F LT PL+  A GTK GKT  GAIWL+
Sbjct: 181 FDVQLQIGGADQWGNITAGLDLIRKLEGPEAEAFGLTIPLMLKADGTKFGKTAGGAIWLD 240

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIATEI 306
            E TSP+ F+Q+W N DD DVV + K  T L   EI  ++K      E  EA++ +A E+
Sbjct: 241 PEKTSPFEFYQFWLNQDDRDVVKYLKFFTFLTQEEIAELSKKVETEPEKREAQRRLAEEV 300

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQH----------MPTISISKDEVSRGMGLLTLI 356
           T  VH  E+ ++A       F  +I   +          MP + IS    S    ++ L+
Sbjct: 301 TRFVHSEEDLKEAQKITDALFSGNIKELNAAEIAQGFGKMPNVEIS----SNPENIVELL 356

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN--IKLSFGKKNHIIC 414
           V      S  +AR  + + AI IN   +++  L   +  FD+     + +  GKKN+ + 
Sbjct: 357 VSTKIEPSKRQAREDVSNGAISINGDRVTD--LNFVINPFDAFDGKFVVIRKGKKNYFLA 414

Query: 415 HLC 417
            + 
Sbjct: 415 KVV 417


>gi|227551041|ref|ZP_03981090.1| tyrosine--tRNA ligase [Enterococcus faecium TX1330]
 gi|257896666|ref|ZP_05676319.1| tyrosyl-tRNA synthetase [Enterococcus faecium Com12]
 gi|227179820|gb|EEI60792.1| tyrosine--tRNA ligase [Enterococcus faecium TX1330]
 gi|257833231|gb|EEV59652.1| tyrosyl-tRNA synthetase [Enterococcus faecium Com12]
          Length = 418

 Score =  232 bits (592), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 152/421 (36%), Positives = 224/421 (53%), Gaps = 25/421 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L+ R  I+Q +N   L  L  +  ++ Y G D T  S+H GHL   M++   Q  GH P 
Sbjct: 7   LTWRDAINQQTNEERLRELVEEKSISLYCGVDPTGDSMHIGHLIPFMMMKRFQLAGHHPY 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK-TDALMLNNET 130
            L+GGGT  IGDPS R   R +   +++Q N++ +    S+ ++   GK  +   +NN  
Sbjct: 67  ILIGGGTGTIGDPSGRKTERVLQTMEQVQHNVDAL----SNQMRKLFGKDANITFVNNYD 122

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           WL  I  ++ LR+ G  F++N ML+ + V SRL  E  +SF EF Y ILQ+ DF+ L K 
Sbjct: 123 WLSKISLLEFLRDYGKNFNINTMLAKDIVSSRL--EVGISFTEFTYQILQSIDFLHLHKT 180

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKL--FALTSPLLTTASGTKMGKTLSGAIWLN 248
           YD +LQ+GG+DQWGNI  G+DL  +L+ P+   F LT PL+  A GTK GKT  GAIWL+
Sbjct: 181 YDVQLQIGGADQWGNITAGLDLIRKLEGPEAEAFGLTIPLMLKADGTKFGKTAGGAIWLD 240

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIATEI 306
            + TSP+ F+Q+W N DD DVV + K  T L   EI+ +AK      E  EA++ +A E+
Sbjct: 241 PKKTSPFEFYQFWLNQDDRDVVKYLKFFTFLSQEEIEELAKKVETEPEKREAQRRLAEEV 300

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQH----------MPTISISKDEVSRGMGLLTLI 356
           T  VH  E+ ++A       F  +I   +          MP + IS    S    ++ L+
Sbjct: 301 TRFVHSEEDLKEAQKITQALFSGNIKELNAEEIAQGFGKMPNVEIS----STPENIVELL 356

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V      S  +AR  + + AI IN   +++    I   D      + +  GKKN+ +  +
Sbjct: 357 VSTKIEPSKRQAREDVSNGAISINGDRVTDLNFVINPSDEFDGKFVVIRKGKKNYFLAKV 416

Query: 417 C 417
            
Sbjct: 417 I 417


>gi|293568442|ref|ZP_06679762.1| tyrosyl-tRNA synthetase [Enterococcus faecium E1071]
 gi|294619407|ref|ZP_06698864.1| tyrosyl-tRNA synthetase [Enterococcus faecium E1679]
 gi|314939923|ref|ZP_07847126.1| tyrosyl-tRNA synthetase [Enterococcus faecium TX0133a04]
 gi|314941532|ref|ZP_07848419.1| tyrosyl-tRNA synthetase [Enterococcus faecium TX0133C]
 gi|314953825|ref|ZP_07856688.1| tyrosyl-tRNA synthetase [Enterococcus faecium TX0133A]
 gi|314993583|ref|ZP_07858938.1| tyrosyl-tRNA synthetase [Enterococcus faecium TX0133B]
 gi|314997778|ref|ZP_07862691.1| tyrosyl-tRNA synthetase [Enterococcus faecium TX0133a01]
 gi|291588778|gb|EFF20606.1| tyrosyl-tRNA synthetase [Enterococcus faecium E1071]
 gi|291594359|gb|EFF25779.1| tyrosyl-tRNA synthetase [Enterococcus faecium E1679]
 gi|313588222|gb|EFR67067.1| tyrosyl-tRNA synthetase [Enterococcus faecium TX0133a01]
 gi|313591960|gb|EFR70805.1| tyrosyl-tRNA synthetase [Enterococcus faecium TX0133B]
 gi|313594160|gb|EFR73005.1| tyrosyl-tRNA synthetase [Enterococcus faecium TX0133A]
 gi|313599684|gb|EFR78527.1| tyrosyl-tRNA synthetase [Enterococcus faecium TX0133C]
 gi|313640837|gb|EFS05417.1| tyrosyl-tRNA synthetase [Enterococcus faecium TX0133a04]
          Length = 418

 Score =  232 bits (592), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 151/421 (35%), Positives = 225/421 (53%), Gaps = 25/421 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L+ R  I+Q +N   L  L  +  ++ Y G D T  S+H GHL   M++   Q  GH P 
Sbjct: 7   LTWRDAINQQTNEERLRELVEEKSISLYCGVDPTGDSMHIGHLIPFMMMKRFQLAGHHPY 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK-TDALMLNNET 130
            L+GGGT  IGDPS R   R +   +++Q N++ +    S+ ++   GK  +   +NN  
Sbjct: 67  ILIGGGTGTIGDPSGRKTERVLQTMEQVQHNVDAL----SNQMRKLFGKDANITFVNNYD 122

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           WL  I  ++ LR+ G  F++N ML+ + V SRL  E  +SF EF Y ILQ+ DF+ L K 
Sbjct: 123 WLSKISLLEFLRDYGKNFNINTMLAKDIVASRL--EVGISFTEFTYQILQSIDFLHLHKT 180

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKL--FALTSPLLTTASGTKMGKTLSGAIWLN 248
           YD +LQ+GG+DQWGNI  G+DL  +L+ P++  F LT PL+  A GTK GKT  GA+WL+
Sbjct: 181 YDVQLQIGGADQWGNITAGLDLIRKLEGPEVEAFGLTIPLMLKADGTKFGKTAGGAVWLD 240

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIATEI 306
            + TSP+ F+Q+W N DD DVV + K  T L   EI+ +AK      E  EA++ +A E+
Sbjct: 241 PKKTSPFEFYQFWLNQDDRDVVKYLKFFTFLSQEEIEDLAKKVETEPEKREAQRRLAEEV 300

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQH----------MPTISISKDEVSRGMGLLTLI 356
           T  VH  E+ ++A       F  +I   +          MP + IS    S    ++ L+
Sbjct: 301 TRFVHSEEDLKEAQKITQALFSGNIKELNAEEIAQGFGKMPNVEIS----STPENIVELL 356

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V      S  +AR  + + AI IN   +++    I   D      + +  GKKN+ +  +
Sbjct: 357 VSTKIEPSKRQAREDVSNGAISINGDRVTDLNFVINPSDEFDGKFVVIRKGKKNYFLAKV 416

Query: 417 C 417
            
Sbjct: 417 I 417


>gi|257888920|ref|ZP_05668573.1| tyrosyl-tRNA synthetase [Enterococcus faecium 1,141,733]
 gi|293378453|ref|ZP_06624617.1| tyrosine--tRNA ligase [Enterococcus faecium PC4.1]
 gi|257824976|gb|EEV51906.1| tyrosyl-tRNA synthetase [Enterococcus faecium 1,141,733]
 gi|292642917|gb|EFF61063.1| tyrosine--tRNA ligase [Enterococcus faecium PC4.1]
          Length = 418

 Score =  232 bits (592), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 152/421 (36%), Positives = 224/421 (53%), Gaps = 25/421 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L+ R  I+Q +N   L  L  +  ++ Y G D T  S+H GHL   M++   Q  GH P 
Sbjct: 7   LTWRDAINQQTNEERLRELVEEKSISLYCGVDPTGDSMHIGHLIPFMMMKRFQLAGHHPY 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK-TDALMLNNET 130
            L+GGGT  IGDPS R   R +   +++Q N++ +    S+ ++   GK  +   +NN  
Sbjct: 67  ILIGGGTGTIGDPSGRKTERVLQTMEQVQHNVDAL----SNQMRKLFGKDANITFVNNYD 122

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           WL  I  ++ LR+ G  F++N ML+ + V SRL  E  +SF EF Y ILQ+ DF+ L K 
Sbjct: 123 WLSKISLLEFLRDYGKNFNINTMLAKDIVASRL--EVGISFTEFTYQILQSIDFLHLHKT 180

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKL--FALTSPLLTTASGTKMGKTLSGAIWLN 248
           YD +LQ+GG+DQWGNI  G+DL  +L+ P+   F LT PL+  A GTK GKT  GAIWL+
Sbjct: 181 YDVQLQIGGADQWGNITAGLDLIRKLEGPEAEAFGLTIPLMLKADGTKFGKTAGGAIWLD 240

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIATEI 306
            + TSP+ F+Q+W N DD DVV + K  T L   EI+ +AK      E  EA++ +A E+
Sbjct: 241 PKKTSPFEFYQFWLNQDDRDVVKYLKFFTFLSQEEIEELAKKVETEPEKREAQRRLAEEV 300

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQH----------MPTISISKDEVSRGMGLLTLI 356
           T  VH  E+ ++A       F  +I   +          MP + IS    S    ++ L+
Sbjct: 301 TRFVHSEEDLKEAQKITQALFSGNIKELNAEEIAQGFGKMPNVEIS----STPENIVELL 356

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V      S  +AR  + + AI IN   +++    I   D      + +  GKKN+ +  +
Sbjct: 357 VSTKIEPSKRQAREDVSNGAISINGDRVTDLNFVINPSDEFDGKFVVIRKGKKNYFLAKV 416

Query: 417 C 417
            
Sbjct: 417 I 417


>gi|309808169|ref|ZP_07702079.1| tyrosine--tRNA ligase [Lactobacillus iners LactinV 01V1-a]
 gi|315653252|ref|ZP_07906175.1| tyrosine--tRNA ligase [Lactobacillus iners ATCC 55195]
 gi|308168550|gb|EFO70658.1| tyrosine--tRNA ligase [Lactobacillus iners LactinV 01V1-a]
 gi|315489415|gb|EFU79054.1| tyrosine--tRNA ligase [Lactobacillus iners ATCC 55195]
          Length = 417

 Score =  232 bits (592), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 144/391 (36%), Positives = 208/391 (53%), Gaps = 25/391 (6%)

Query: 7   DFLSILSERGFIHQISNPREL-DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           D L  L  RG I+Q ++ + L + L     +T Y G D T  SLH GHL   M+L   Q 
Sbjct: 2   DILEDLKWRGAINQQTDEQGLREYLQQHKDLTLYCGTDPTGDSLHIGHLIPFMILKRFQM 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            G+ PI L+GG T  IGDPS R   R +   ++++ N    +   +S ++   G  +  +
Sbjct: 62  AGYHPIILIGGATGAIGDPSGRKTERVLQSEEQVRHN----EKCLTSQMEKLFGTENFEI 117

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN +WL  +  +D LR+ G  F VN ML+ + V SRL     +S+ EF Y I+QA DF 
Sbjct: 118 VNNASWLSKLTLLDFLRDYGKLFQVNTMLNKDIVASRLA--TGISYTEFTYQIMQAIDFY 175

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK--LFALTSPLLTTASGTKMGKTLSG 243
            L KN +  LQ+GG DQWGNI  GIDL  R++      F LT PL+  + GTK GK+  G
Sbjct: 176 YLNKNKNVTLQIGGGDQWGNITGGIDLIHRIEGADHPAFGLTIPLMLKSDGTKFGKSAGG 235

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKI 301
           AIWL+ E TSPY F+Q+W N DD DV+ + K  T L   EI+ +A    KE  +  A++ 
Sbjct: 236 AIWLDPEKTSPYEFYQFWINQDDRDVIKYLKYFTFLSHQEIEDLAISVEKEPWKRLAQRK 295

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMG 351
           +A E+T  VHG      A       F+ +I            ++ P + IS++  +    
Sbjct: 296 LAEEVTKFVHGEAGLRDAQFITNALFEGNIKELSVKQIEQGFKNAPYVEISQESKN---- 351

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNS 382
           L+ L+V+ G   S  +AR  + + AI +N S
Sbjct: 352 LVDLLVETGIEKSKRQAREDINNGAIYVNGS 382


>gi|325860199|ref|ZP_08173324.1| tyrosine--tRNA ligase [Prevotella denticola CRIS 18C-A]
 gi|325482286|gb|EGC85294.1| tyrosine--tRNA ligase [Prevotella denticola CRIS 18C-A]
          Length = 432

 Score =  232 bits (592), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 141/428 (32%), Positives = 224/428 (52%), Gaps = 27/428 (6%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG + QI    E   L  + +V+AY+G D TA SLH GHL  +M+L  LQ+ 
Sbjct: 3   NFVEELRWRGMLAQIMPGTEE--LLQKEMVSAYLGTDPTADSLHIGHLCGIMMLRHLQRC 60

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY-GTGKTDALM 125
           GHKP  L+GG T +IGDPS + + R ++ ++ +  N E IK   S F+ + G+    A M
Sbjct: 61  GHKPYLLVGGATGMIGDPSGKSQERNLLDAETLYHNQEAIKKQVSKFLDFDGSEPNKAEM 120

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQAYD 183
           +NN  W+    ++D  R +G   +VN M++ +SV+ RL  E    LSF EF Y +LQ YD
Sbjct: 121 VNNYDWMKDFTFLDFARVVGKHITVNYMMAKDSVQKRLNGEARDGLSFTEFTYQLLQGYD 180

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERL--KTPKLFALTSPLLTTASGTKMGKTL 241
           F+   + +  +LQ+GG+DQWGN+  G +L  R      + + LT PL+T A G K GKT 
Sbjct: 181 FLYQYEKFGVKLQLGGNDQWGNMTTGTELIRRTLGSEAEAYCLTCPLITKADGKKFGKTE 240

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEA--K 299
           SG IWL++  T+PY F+Q+W N+ D D   + K  T+L    ID + +   ++      +
Sbjct: 241 SGNIWLDRNRTTPYAFYQFWLNVSDEDAEKYIKIFTSLEKDIIDALIEEHRQDPGRRTLQ 300

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDE 345
           + +A E+T MVH +++ + A  A+   F  S                 + +P   +SKD 
Sbjct: 301 RRLAEEVTRMVHSQDDLDMAIAASNILFGKSTKENLLQLDEQTFADVFKDVPHYEVSKDI 360

Query: 346 VSRGMGLLTLIVKAGFA--TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
           +  G   + +  + G     S +E R+ +K   + +N   ++     +   D      + 
Sbjct: 361 L--GQPAVEVFNQEGMQIFPSKSEMRKLVKGGGVSLNKEKLAAFDQPVTADDLIDGKYLL 418

Query: 404 LSFGKKNH 411
           +  GKKN+
Sbjct: 419 VQKGKKNY 426


>gi|97202387|sp|Q8D2L6|SYY_WIGBR RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
          Length = 426

 Score =  232 bits (591), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 135/386 (34%), Positives = 222/386 (57%), Gaps = 11/386 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D +  L  R  I ++++   +  +  +  +  Y G+D TA SLH GHL  L+ L      
Sbjct: 3   DLIQELKNRKLISKLTDEINIKKILKEKKINLYCGFDPTADSLHIGHLIPLLFLKRFSNF 62

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH PI ++GG T+++GD + +     + + + ++   + I+    + IKY     + ++L
Sbjct: 63  GHIPIIVIGGATALLGDFNIKKNKSFLEKYKNVKNWSKTIENQILNIIKYENNNCNLIIL 122

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W+  +K I+ LR+IG F S+N++L  E V+ +LK  Q +SF+EF+Y +LQ YD+  
Sbjct: 123 NNYLWIKELKIINFLRDIGRFISINKILRKEIVKKKLKENQHISFMEFSYSLLQGYDYYF 182

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT--LSGA 244
           L  NYD  +Q+GGSDQW NII GIDL  ++   K++ +T+PLLT ++G+K+GK+      
Sbjct: 183 LNLNYDVYIQIGGSDQWSNIISGIDLVNKINKKKVYGITTPLLTRSNGSKLGKSDDKEKV 242

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM-AKLQGKEIN--EAKKI 301
           IWL+K+ TS Y F+Q+W N  D  +  + K  T + MSEI+++  K   KEIN  +A+KI
Sbjct: 243 IWLDKKKTSVYEFYQFWLNTPDEKIFRYLKLFTFISMSEINKLKCKFFNKEINPFQAQKI 302

Query: 302 IATEITTMVHGREEAEKAATAAMECF-----DMSIHSQHMPTISISKDEVSR-GMGLLTL 355
           +A EIT +VHG  +   A  A    F     ++SI   ++ + S  K    +    +  +
Sbjct: 303 LADEITKIVHGISQLRLAQKATNFLFYKKISELSIEDFYLLSTSGIKIYYPKSNENIKDI 362

Query: 356 IVKAGFATSTNEARRHLKSNAIKINN 381
           +V +  + S N A+  + S++I+INN
Sbjct: 363 LVNSKLSKSKNNAKSVILSSSIRINN 388


>gi|309775624|ref|ZP_07670624.1| tyrosine--tRNA ligase [Erysipelotrichaceae bacterium 3_1_53]
 gi|308916718|gb|EFP62458.1| tyrosine--tRNA ligase [Erysipelotrichaceae bacterium 3_1_53]
          Length = 405

 Score =  232 bits (591), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 136/384 (35%), Positives = 207/384 (53%), Gaps = 20/384 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I+ +++  EL+   + G +T YIG D T  SLH GH + L+    L++ GH PI
Sbjct: 7   LKYRGLINDVTSL-ELEEKLNNGGLTFYIGTDPTGDSLHIGHYSSLLCAKRLKEHGHHPI 65

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+GG T  IGDP    E R M+  + ++ N + +         +        M+NN  W
Sbjct: 66  MLVGGATGFIGDPKASGE-RNMLTKEVLEHNYQCLSKQIEELFGFE-------MVNNLDW 117

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
              I  ID LR+ G +F+V+ M++ E+V+ RL  +  +S+ EF+YMILQA DF+ L ++ 
Sbjct: 118 TKDISVIDFLRDYGKYFNVSYMINKETVKRRL--DAGISYTEFSYMILQALDFLHLYEDK 175

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKL--FALTSPLLTTASGTKMGKTLSGAIWLNK 249
            C LQ+GG DQWGNI  G++L  +    ++  + LT PL+T A GTK GK+ SG +WL+K
Sbjct: 176 GCTLQLGGQDQWGNITSGLELIRKKHGAEVECYGLTMPLITKADGTKFGKSESGTVWLDK 235

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE--INEAKKIIATEIT 307
           + TS Y  +Q+  N +D  V+ + K+LT L   EID + +    E    EA+K +A E+ 
Sbjct: 236 KKTSAYEMYQFLVNSEDEKVIDYLKKLTFLSKEEIDALEEKVKTEPHFREAQKTLAKEVV 295

Query: 308 TMVHGREEAEKAATAAMECF-----DMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFA 362
           T +HG EE  KA       F     D+     H         ++   + L   +V+AG A
Sbjct: 296 TFLHGEEEYNKALKITNALFKGNIRDLDAGELHDALKGFEAAKIDDALTLTDTLVQAGIA 355

Query: 363 TSTNEARRHLKSNAIKINNSIISN 386
           +S  EAR  +   +I++N   I +
Sbjct: 356 SSKREAREWINQGSIQVNGDKIKD 379


>gi|169350220|ref|ZP_02867158.1| hypothetical protein CLOSPI_00964 [Clostridium spiroforme DSM 1552]
 gi|169293003|gb|EDS75136.1| hypothetical protein CLOSPI_00964 [Clostridium spiroforme DSM 1552]
          Length = 408

 Score =  232 bits (591), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 135/406 (33%), Positives = 215/406 (52%), Gaps = 18/406 (4%)

Query: 15  RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLM 74
           RG I  +S+P +L+   + G +T YIG D T  SLH GH +  ++   L+  GH PI L+
Sbjct: 10  RGLIKDVSSP-DLEEKLNNGGMTFYIGTDPTGDSLHIGHFSSFLISKRLKDAGHNPILLV 68

Query: 75  GGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCS 134
           GG T +IGDP   D  R M+  + ++ N   +K        +        ++NN  W   
Sbjct: 69  GGATGLIGDPK-PDTERPMITKETVEHNFNCLKKQAQDIFGFE-------VVNNFDWSKD 120

Query: 135 IKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCR 194
           + +ID LR+ G +F+VN ML+ + V+ RL  +  +++ EF+YMI+QA DF  L  N +C 
Sbjct: 121 LNFIDFLRDYGKYFNVNYMLNKDIVKRRL--DAGITYTEFSYMIMQAMDFEWLYNNKNCV 178

Query: 195 LQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSP 254
           +Q+ G DQWGNI  GI+L  +    + +  T PLLT + GTK GKT   AIWL+KE TSP
Sbjct: 179 MQVAGQDQWGNITAGIELIRKKDGKEAYGFTMPLLTKSDGTKFGKTNGKAIWLDKEKTSP 238

Query: 255 YNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE--INEAKKIIATEITTMVHG 312
           Y  +Q++ N +D  V+ + K LT L   EI  + +    +  + EA + +A E+ T +HG
Sbjct: 239 YEMYQFFINSEDEKVIDYLKFLTFLTPEEIMELEEKNKTQPHLREAHQALAREVITFLHG 298

Query: 313 REEAEKAATAAMECFDMSIHSQHMPTI-----SISKDEVSRGMGLLTLIVKAGFATSTNE 367
           +E  E+A   +   F   I S  +  +      ++  +V+  + +L  ++  G A S  E
Sbjct: 299 KEAYEEAQNISKMLFSGQIQSLTLDQVKVCFEGVASVDVNEDLNILDALITCGGAKSKRE 358

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
           AR  +   ++ IN   I +    +K ++        +  GKKN+ +
Sbjct: 359 AREFVNGGSVLINGERIKDVDFVVKKENAFGNEATVIRRGKKNYFV 404


>gi|32491087|ref|NP_871341.1| hypothetical protein WGLp338 [Wigglesworthia glossinidia
           endosymbiont of Glossina brevipalpis]
 gi|25166294|dbj|BAC24484.1| tyrS [Wigglesworthia glossinidia endosymbiont of Glossina
           brevipalpis]
          Length = 496

 Score =  232 bits (591), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 135/386 (34%), Positives = 222/386 (57%), Gaps = 11/386 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D +  L  R  I ++++   +  +  +  +  Y G+D TA SLH GHL  L+ L      
Sbjct: 73  DLIQELKNRKLISKLTDEINIKKILKEKKINLYCGFDPTADSLHIGHLIPLLFLKRFSNF 132

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH PI ++GG T+++GD + +     + + + ++   + I+    + IKY     + ++L
Sbjct: 133 GHIPIIVIGGATALLGDFNIKKNKSFLEKYKNVKNWSKTIENQILNIIKYENNNCNLIIL 192

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W+  +K I+ LR+IG F S+N++L  E V+ +LK  Q +SF+EF+Y +LQ YD+  
Sbjct: 193 NNYLWIKELKIINFLRDIGRFISINKILRKEIVKKKLKENQHISFMEFSYSLLQGYDYYF 252

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT--LSGA 244
           L  NYD  +Q+GGSDQW NII GIDL  ++   K++ +T+PLLT ++G+K+GK+      
Sbjct: 253 LNLNYDVYIQIGGSDQWSNIISGIDLVNKINKKKVYGITTPLLTRSNGSKLGKSDDKEKV 312

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM-AKLQGKEIN--EAKKI 301
           IWL+K+ TS Y F+Q+W N  D  +  + K  T + MSEI+++  K   KEIN  +A+KI
Sbjct: 313 IWLDKKKTSVYEFYQFWLNTPDEKIFRYLKLFTFISMSEINKLKCKFFNKEINPFQAQKI 372

Query: 302 IATEITTMVHGREEAEKAATAAMECF-----DMSIHSQHMPTISISKDEVSR-GMGLLTL 355
           +A EIT +VHG  +   A  A    F     ++SI   ++ + S  K    +    +  +
Sbjct: 373 LADEITKIVHGISQLRLAQKATNFLFYKKISELSIEDFYLLSTSGIKIYYPKSNENIKDI 432

Query: 356 IVKAGFATSTNEARRHLKSNAIKINN 381
           +V +  + S N A+  + S++I+INN
Sbjct: 433 LVNSKLSKSKNNAKSVILSSSIRINN 458


>gi|257900037|ref|ZP_05679690.1| tyrosyl-tRNA synthetase [Enterococcus faecium Com15]
 gi|257837949|gb|EEV63023.1| tyrosyl-tRNA synthetase [Enterococcus faecium Com15]
          Length = 418

 Score =  231 bits (590), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 151/421 (35%), Positives = 224/421 (53%), Gaps = 25/421 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L+ R  I+Q +N   L  L  +  ++ Y G D T  S+H GHL   M++   Q  GH P 
Sbjct: 7   LTWRDAINQQTNEERLRELVEEKSISLYCGVDPTGDSMHIGHLIPFMMMKRFQLAGHHPY 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK-TDALMLNNET 130
            L+GGGT  IGDPS R   R +   +++Q N++ +    S+ ++   GK  +   +NN  
Sbjct: 67  ILIGGGTGTIGDPSGRKTERVLQTMEQVQHNVDAL----SNQMRKLFGKDANITFVNNYD 122

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           WL  I  ++ LR+ G  F++N ML+ + V SRL  E  +SF EF Y ILQ+ DF+ L K 
Sbjct: 123 WLSKISLLEFLRDYGKNFNINTMLAKDIVASRL--EVGISFTEFTYQILQSIDFLHLHKT 180

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKL--FALTSPLLTTASGTKMGKTLSGAIWLN 248
           YD +LQ+GG+DQWGNI  G+DL  +L+ P+   F LT PL+  A GTK GKT  GA+WL+
Sbjct: 181 YDVQLQIGGADQWGNITAGLDLIRKLEGPEAEAFGLTIPLMLKADGTKFGKTAGGAVWLD 240

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIATEI 306
            + TSP+ F+Q+W N DD DVV + K  T L   EI+ +AK      E  EA++ +A E+
Sbjct: 241 PKKTSPFEFYQFWLNQDDRDVVKYLKFFTFLSQEEIEELAKKVETEPEKREAQRRLAEEV 300

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQH----------MPTISISKDEVSRGMGLLTLI 356
           T  VH  E+ ++A       F  +I   +          MP + IS    S    ++ L+
Sbjct: 301 TRFVHSEEDLKEAQKITQALFSGNIKELNAEEIAQGFGKMPNVEIS----STPENIVELL 356

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V      S  +AR  + + AI IN   +++    I   D      + +  GKKN+ +  +
Sbjct: 357 VSTKIEPSKRQAREDVSNGAISINGDRVTDLNFVINPSDEFDGKFVVIRKGKKNYFLAKV 416

Query: 417 C 417
            
Sbjct: 417 I 417


>gi|261878996|ref|ZP_06005423.1| tyrosine-tRNA ligase [Prevotella bergensis DSM 17361]
 gi|270334381|gb|EFA45167.1| tyrosine-tRNA ligase [Prevotella bergensis DSM 17361]
          Length = 432

 Score =  231 bits (590), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 128/335 (38%), Positives = 189/335 (56%), Gaps = 9/335 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG + QI    E  +L  Q +V+AY+G D TA SLH GHL  +M+L  LQ+ 
Sbjct: 3   NFVEELKWRGMLAQIMPGTEEYLL--QNMVSAYLGTDPTADSLHIGHLCGIMMLRHLQRC 60

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY-GTGKTDALM 125
           GHKP  L+GG T +IGDPS + + R ++ +  +  N E IK   + F+ + G     A +
Sbjct: 61  GHKPYLLVGGATGMIGDPSGKSQERNLLDADTLYHNQEAIKKQCAKFLDFDGNELNKAEL 120

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK--REQSLSFLEFNYMILQAYD 183
           +NN  W+    ++D  R +G   +VN M++ ESV+ RL       LSF EF Y +LQ YD
Sbjct: 121 VNNYDWMKDFTFLDFARTVGKHITVNYMMAKESVQQRLNGTARDGLSFTEFTYQLLQGYD 180

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERL--KTPKLFALTSPLLTTASGTKMGKTL 241
           F+ L ++   RLQ+GG+DQWGN+  G +L  R      + FALT PL+T A G K GKT 
Sbjct: 181 FLHLYQHNGVRLQLGGNDQWGNMTTGTELIRRTLGNDVEAFALTCPLITKADGKKFGKTE 240

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEA--K 299
           SG +WL++  T+PY F+Q+W N+ D D   + K  T L    I  +     ++      +
Sbjct: 241 SGNVWLDRNRTTPYTFYQFWLNVSDDDAERYIKIFTDLDRETIAALVAEHTEDPGRRTLQ 300

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQ 334
           + +A E+TTMVH +E+ + A  A+   F  +   Q
Sbjct: 301 RRLAEEVTTMVHSKEDLDMAIAASNILFGKATKDQ 335


>gi|162448028|ref|YP_001621160.1| tyrosyl-tRNA synthetase [Acholeplasma laidlawii PG-8A]
 gi|189083638|sp|A9NHF4|SYY_ACHLI RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|161986135|gb|ABX81784.1| tyrosyl-tRNA synthetase [Acholeplasma laidlawii PG-8A]
          Length = 410

 Score =  231 bits (590), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 148/388 (38%), Positives = 216/388 (55%), Gaps = 17/388 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D    L  RG +  +S+      L ++  +  Y+GYD T  SL  GHL Q++ + +LQK 
Sbjct: 2   DLFKQLEYRGMVKDVSDLELAKQLLNEQKIKFYVGYDPTGESLTVGHLVQIVRMLYLQKH 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ-ENIEKIKGIFSSFIKYGTGKTDALM 125
           GH P+ L+GGGT +IGDP  R+ S R + + E   EN +KI+      IK   G  +   
Sbjct: 62  GHTPVVLIGGGTGLIGDP--RETSERSLLTLEKSLENAQKIENQIKGLIK---GNVE--F 114

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  WL  I  I  LR+ G  FSV+ ML  ++V+ RL  E  +S+ EF+YMILQ+ D++
Sbjct: 115 VNNYEWLSKIDLISFLRDYGKHFSVSYMLHKDTVQKRL--ESGISYTEFSYMILQSIDWL 172

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGER-LKTPKLFALTSPLLTTASGTKMGKTLSGA 244
            L +N D ++Q GGSDQWGN+  G++L  R L       L+SPLL  A GTK GK+ SGA
Sbjct: 173 NLYQNRDVKIQFGGSDQWGNLTSGLELIRRVLGKNDAVGLSSPLLLKADGTKFGKSESGA 232

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKII 302
           +WL+KE+TSPY  +QY+ N  D D+  F K LT +   EI+ + +   +  E+  A+K++
Sbjct: 233 LWLDKELTSPYELYQYFLNSSDTDIEQFLKLLTLIEQDEIEAILETHREKPELRHAQKVL 292

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIH---SQHMPTISISKDEVS-RGMGLLTLIVK 358
           A  +  +VHG+EE E A       F    +        T+    D V   G  L+ L+VK
Sbjct: 293 AKAVVELVHGKEELETALQVTEALFSGEFNGLTKSAYKTLESVIDVVRFNGESLIELVVK 352

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISN 386
           +  A+S  EAR  + + AI I    I++
Sbjct: 353 SKLASSNREAREFISNGAISIQGEKITD 380


>gi|312214909|emb|CBX94863.1| similar to tyrosyl-tRNA synthetase [Leptosphaeria maculans]
          Length = 598

 Score =  231 bits (590), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 132/354 (37%), Positives = 205/354 (57%), Gaps = 33/354 (9%)

Query: 5   KSDFLSILSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           +   LS+L ERGF+  ++   E LD L ++  + AY+G D TA SLH GHL  LM L+W+
Sbjct: 61  QQSMLSLLEERGFVKHVAGGHETLDWLLTEKRIGAYVGVDPTAPSLHVGHLLPLMTLYWM 120

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESR-------RMMRSQEIQENIEKI------KGIF 110
              G+  +SL+GGGT  IGDPS R  +R       R M  + IQ  +EK+       GI 
Sbjct: 121 YLHGYYTVSLLGGGTVQIGDPSGRTTARSRQAADVRSMNVESIQGQLEKLWTNVKCLGIK 180

Query: 111 SSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLS 170
             + +Y + + D  +L+N +WL ++  ++L+R++GS   +  MLS +SV+ R++  + ++
Sbjct: 181 HQYSQYTSRRFD--ILDNRSWLETLSAVELMRDLGSGMRLGPMLSRDSVKLRMESGEGMA 238

Query: 171 FLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT------------ 218
             EF+Y + QAYD+  + KN   ++Q+GGSDQ+GNI  G+D    ++             
Sbjct: 239 ISEFSYPLFQAYDWWSMYKNRGVQMQIGGSDQYGNICAGMDAVSHMRKIHRMSDTTSKDD 298

Query: 219 -PKL--FALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKR 275
            P +  + LT+PLLTTASG K GK+   A+WL+K M S ++ +QY+    D DV  + K 
Sbjct: 299 DPSVAAYGLTTPLLTTASGEKFGKSAGNAVWLDKHMLSSFDLYQYFVRTADDDVERYLKL 358

Query: 276 LTTLPMSEIDRMAKLQGKEINE--AKKIIATEITTMVHGREEAEKAATAAMECF 327
            T LP+ +I+ + K Q ++ +   A+ I+A EI  + HG  EA+KA TA  E F
Sbjct: 359 FTFLPLEDIELLMKKQRQDESRRLAQHILAKEIVELAHGSAEAKKAETAHKEAF 412


>gi|325268528|ref|ZP_08135158.1| tyrosine--tRNA ligase [Prevotella multiformis DSM 16608]
 gi|324989056|gb|EGC21009.1| tyrosine--tRNA ligase [Prevotella multiformis DSM 16608]
          Length = 432

 Score =  231 bits (590), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 141/428 (32%), Positives = 223/428 (52%), Gaps = 27/428 (6%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG + QI    E   L  + +V+AY+G D TA SLH GHL  +M+L  LQ+ 
Sbjct: 3   NFVEELRWRGMLAQIMPGTEE--LLQKEMVSAYLGTDPTADSLHIGHLCGIMMLRHLQRC 60

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY-GTGKTDALM 125
           GHKP  L+GG T +IGDPS + + R ++ ++ +  N E IK   S F+ + G+    A M
Sbjct: 61  GHKPYLLVGGATGMIGDPSGKSQERNLLDAETLYHNQEAIKKQVSKFLDFDGSEPNKAEM 120

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQAYD 183
           +NN  W+    ++D  R +G   +VN M++ +SV+ RL  E    LSF EF Y +LQ YD
Sbjct: 121 VNNYDWMKDFTFLDFARVVGKHITVNYMMAKDSVQKRLNGEARDGLSFTEFTYQLLQGYD 180

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERL--KTPKLFALTSPLLTTASGTKMGKTL 241
           F+   + +  +LQ+GG+DQWGN+  G +L  R      + + LT PL+T A G K GKT 
Sbjct: 181 FLYQYEKFGVKLQLGGNDQWGNMTTGTELIRRTLGSEAEAYCLTCPLITKADGKKFGKTE 240

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEA--K 299
           SG IWL++  T+PY F+Q+W N+ D D   + K  T+L    ID + +   ++      +
Sbjct: 241 SGNIWLDRNRTTPYAFYQFWLNVSDEDAEKYIKIFTSLEKDVIDALIEEHRQDPGRRTLQ 300

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDE 345
           + +A E+T MVH +++ + A  A+   F  S                 + +P    SKD 
Sbjct: 301 RRLAEEVTRMVHSQDDLDMAVAASNILFGKSTKENLLQLDEQTFADVFKDVPHYEASKDI 360

Query: 346 VSRGMGLLTLIVKAGFA--TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
           +  G   + +  + G     S +E R+ +K   + +N   ++     +   D      + 
Sbjct: 361 L--GQPAVEVFNQEGMQIFPSKSEMRKLVKGGGVSLNKEKLAAFDQPVTADDLIDGKYLL 418

Query: 404 LSFGKKNH 411
           +  GKKN+
Sbjct: 419 VQKGKKNY 426


>gi|260558538|ref|ZP_05830734.1| tyrosyl-tRNA synthetase [Enterococcus faecium C68]
 gi|261206885|ref|ZP_05921576.1| tyrosyl-tRNA synthetase [Enterococcus faecium TC 6]
 gi|289565698|ref|ZP_06446143.1| tyrosyl-tRNA synthetase [Enterococcus faecium D344SRF]
 gi|294613986|ref|ZP_06693918.1| tyrosyl-tRNA synthetase [Enterococcus faecium E1636]
 gi|260075712|gb|EEW64018.1| tyrosyl-tRNA synthetase [Enterococcus faecium C68]
 gi|260079015|gb|EEW66715.1| tyrosyl-tRNA synthetase [Enterococcus faecium TC 6]
 gi|289162556|gb|EFD10411.1| tyrosyl-tRNA synthetase [Enterococcus faecium D344SRF]
 gi|291593180|gb|EFF24757.1| tyrosyl-tRNA synthetase [Enterococcus faecium E1636]
          Length = 418

 Score =  231 bits (589), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 151/421 (35%), Positives = 224/421 (53%), Gaps = 25/421 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L+ R  I+Q +N   L  L  +  ++ Y G D T  S+H GHL   M++   Q  GH P 
Sbjct: 7   LTWRDAINQQTNEERLRELVEEKSISLYCGVDPTGDSMHIGHLIPFMMMKRFQLAGHHPY 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK-TDALMLNNET 130
            L+GGGT  IGDPS R   R +   +++Q N++ +    S+ ++   GK  +   +NN  
Sbjct: 67  ILIGGGTGTIGDPSGRKTERVLQTMEQVQHNVDAL----SNQMRKLFGKDANITFVNNYD 122

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           WL  I  ++ LR+ G  F++N ML+ + V SRL  E  +SF EF Y ILQ+ DF+ L K 
Sbjct: 123 WLSKISLLEFLRDYGKNFNINTMLAKDIVASRL--EVGISFTEFTYQILQSIDFLHLYKT 180

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKL--FALTSPLLTTASGTKMGKTLSGAIWLN 248
           YD +LQ+GG+DQWGNI  G+DL  +L+ P+   F LT PL+  A GTK GKT  GA+WL+
Sbjct: 181 YDVQLQIGGADQWGNITAGLDLIRKLEGPEAEAFGLTIPLMLKADGTKFGKTAGGAVWLD 240

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIATEI 306
            + TSP+ F+Q+W N DD DVV + K  T L   EI+ +AK      E  EA++ +A E+
Sbjct: 241 PKKTSPFEFYQFWLNQDDRDVVKYLKFFTFLSQEEIEDLAKKVETEPEKREAQRRLAEEV 300

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQH----------MPTISISKDEVSRGMGLLTLI 356
           T  VH  E+ ++A       F  +I   +          MP + IS    S    ++ L+
Sbjct: 301 TRFVHSEEDLKEAQKITQALFSGNIKELNAEEIAQGFGKMPNVEIS----STPENIVELL 356

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V      S  +AR  + + AI IN   +++    I   D      + +  GKKN+ +  +
Sbjct: 357 VSTKIEPSKRQAREDVSNGAISINGDRVTDLNFVINPSDEFDGKFVVIRKGKKNYFLAKV 416

Query: 417 C 417
            
Sbjct: 417 I 417


>gi|69244479|ref|ZP_00602895.1| Tyrosyl-tRNA synthetase, class Ib [Enterococcus faecium DO]
 gi|257879015|ref|ZP_05658668.1| tyrosyl-tRNA synthetase [Enterococcus faecium 1,230,933]
 gi|257881639|ref|ZP_05661292.1| tyrosyl-tRNA synthetase [Enterococcus faecium 1,231,502]
 gi|257886270|ref|ZP_05665923.1| tyrosyl-tRNA synthetase [Enterococcus faecium 1,231,501]
 gi|257890867|ref|ZP_05670520.1| tyrosyl-tRNA synthetase [Enterococcus faecium 1,231,410]
 gi|258615352|ref|ZP_05713122.1| tyrosyl-tRNA synthetase [Enterococcus faecium DO]
 gi|293557049|ref|ZP_06675609.1| tyrosyl-tRNA synthetase [Enterococcus faecium E1039]
 gi|293562866|ref|ZP_06677338.1| tyrosyl-tRNA synthetase [Enterococcus faecium E1162]
 gi|294622700|ref|ZP_06701659.1| tyrosyl-tRNA synthetase [Enterococcus faecium U0317]
 gi|314950252|ref|ZP_07853535.1| tyrosyl-tRNA synthetase [Enterococcus faecium TX0082]
 gi|68196420|gb|EAN10848.1| Tyrosyl-tRNA synthetase, class Ib [Enterococcus faecium DO]
 gi|257813243|gb|EEV42001.1| tyrosyl-tRNA synthetase [Enterococcus faecium 1,230,933]
 gi|257817297|gb|EEV44625.1| tyrosyl-tRNA synthetase [Enterococcus faecium 1,231,502]
 gi|257822126|gb|EEV49256.1| tyrosyl-tRNA synthetase [Enterococcus faecium 1,231,501]
 gi|257827227|gb|EEV53853.1| tyrosyl-tRNA synthetase [Enterococcus faecium 1,231,410]
 gi|291597838|gb|EFF28971.1| tyrosyl-tRNA synthetase [Enterococcus faecium U0317]
 gi|291600869|gb|EFF31161.1| tyrosyl-tRNA synthetase [Enterococcus faecium E1039]
 gi|291605190|gb|EFF34652.1| tyrosyl-tRNA synthetase [Enterococcus faecium E1162]
 gi|313643391|gb|EFS07971.1| tyrosyl-tRNA synthetase [Enterococcus faecium TX0082]
          Length = 418

 Score =  231 bits (589), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 151/421 (35%), Positives = 224/421 (53%), Gaps = 25/421 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L+ R  I+Q +N   L  L  +  ++ Y G D T  S+H GHL   M++   Q  GH P 
Sbjct: 7   LTWRDAINQQTNEERLRELVEEKSISLYCGVDPTGDSMHIGHLIPFMMMKRFQLAGHHPY 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK-TDALMLNNET 130
            L+GGGT  IGDPS R   R +   +++Q N++ +    S+ ++   GK  +   +NN  
Sbjct: 67  ILIGGGTGTIGDPSGRKTERVLQTMEQVQHNVDAL----SNQMRKLFGKDANITFVNNYD 122

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           WL  I  ++ LR+ G  F++N ML+ + V SRL  E  +SF EF Y ILQ+ DF+ L K 
Sbjct: 123 WLSKISLLEFLRDYGKNFNINTMLAKDIVASRL--EVGISFTEFTYQILQSIDFLHLHKT 180

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKL--FALTSPLLTTASGTKMGKTLSGAIWLN 248
           YD +LQ+GG+DQWGNI  G+DL  +L+ P+   F LT PL+  A GTK GKT  GA+WL+
Sbjct: 181 YDVQLQIGGADQWGNITAGLDLIRKLEGPEAEAFGLTIPLMLKADGTKFGKTAGGAVWLD 240

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIATEI 306
            + TSP+ F+Q+W N DD DVV + K  T L   EI+ +AK      E  EA++ +A E+
Sbjct: 241 PKKTSPFEFYQFWLNQDDRDVVKYLKFFTFLSQEEIEDLAKKVETEPEKREAQRRLAEEV 300

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQH----------MPTISISKDEVSRGMGLLTLI 356
           T  VH  E+ ++A       F  +I   +          MP + IS    S    ++ L+
Sbjct: 301 TRFVHSEEDLKEAQKITQALFSGNIKELNAEEIAQGFGKMPNVEIS----STPENIVELL 356

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V      S  +AR  + + AI IN   +++    I   D      + +  GKKN+ +  +
Sbjct: 357 VSTKIEPSKRQAREDVSNGAISINGDRVTDLNFVINPSDEFDGKFVVIRKGKKNYFLAKV 416

Query: 417 C 417
            
Sbjct: 417 I 417


>gi|321263242|ref|XP_003196339.1| tyrosine-tRNA ligase [Cryptococcus gattii WM276]
 gi|317462815|gb|ADV24552.1| tyrosine-tRNA ligase, putative [Cryptococcus gattii WM276]
          Length = 478

 Score =  231 bits (589), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 149/457 (32%), Positives = 231/457 (50%), Gaps = 46/457 (10%)

Query: 3   AFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
           A K+  L  L ERGF+  I++ +    + S    T Y G D +ASSLH G+L  L+ L  
Sbjct: 24  APKTTVLQELDERGFVAAITSDKLKQHVTSP--TTIYAGVDPSASSLHVGNLLPLLGLLH 81

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT---- 118
            Q  GH+ I L+GG T  IGDPS R   R+ +   E++ NI  I      F   G     
Sbjct: 82  FQAHGHQSICLIGGATGSIGDPSGRSTERKSLTPSELRLNIAGITSQVHRFFIRGQEYLS 141

Query: 119 ------------GKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE 166
                       G     ++NN  W+  +  +D LR  G    V+ MLS +SV++RL  +
Sbjct: 142 KRGVDLAAMRKDGGRGVKVMNNYEWMRDVSLLDFLRTTGKMARVSTMLSRDSVKNRLNSD 201

Query: 167 QSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL------------GE 214
             +S+ EF Y +LQAYDF  L   + C +Q+GGSDQWGNI+ GIDL            GE
Sbjct: 202 SGISYTEFTYQLLQAYDFSHLHSEHGCNIQLGGSDQWGNIVAGIDLIRRGKIAEREEKGE 261

Query: 215 RLKTPK--LFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSF 272
           ++K  +  ++ LT PLLTT++G K GK+   A+WL+ + TS   F+Q++    D DV  +
Sbjct: 262 QVKDEEGDVYGLTIPLLTTSTGEKFGKSAGNAVWLDDKRTSAAEFYQFFLRTTDEDVEKY 321

Query: 273 AKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATEITTMVHGREEAEKAATAAMECFDMS 330
            K  T LP+S I  + +       E   +K++A E+T +VHG     +A TAA   +  S
Sbjct: 322 LKLFTFLPLSRIQDVMQAHQTSKTERLPQKLLAAEVTELVHGPAALSRALTAAQVLYSTS 381

Query: 331 IHSQHMPTI-----------SISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKI 379
           I S     +            + K++++  MG+  + V  G   S  E++R ++S+A+++
Sbjct: 382 ISSLTAEKVLDAFRGDMRFHRVKKEDLAE-MGVGKVTVTYGLCGSVGESQRLVQSSALQV 440

Query: 380 NNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           N+  I + + +I ++D        +  G K  II ++
Sbjct: 441 NDRKIGDHREKIVVEDLVDGHIAIVRAGNKRQIILYV 477


>gi|330718068|ref|ZP_08312668.1| tyrosyl-tRNA synthetase [Leuconostoc fallax KCTC 3537]
          Length = 417

 Score =  231 bits (588), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 148/419 (35%), Positives = 222/419 (52%), Gaps = 19/419 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           DFL  L  RG + Q+++   L      G + AY+G D TASS+H G+L  LM+L   Q  
Sbjct: 2   DFLEDLEWRGSLKQVTDAAGLRKAMQDGQIGAYVGVDPTASSIHIGNLIPLMVLKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHK + + GGGT  IGDPS +   R ++  ++I +N+E  K  F     +     D  ++
Sbjct: 62  GHKAVIIAGGGTGAIGDPSGKKNERTLLSLEQINDNVEAQKKQFQKLFGH---DDDFSIV 118

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  +   + LR+ G  FSVN M+  + V SRL  +  +SF EF Y ILQ  DF E
Sbjct: 119 NNNDWLGQLTLQEFLRDYGKLFSVNVMIKKDVVASRL--DAGISFTEFTYQILQGIDFHE 176

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLK--TPKLFALTSPLLTTASGTKMGKTLSGA 244
           L +  + RLQ+GGSDQWGNI  GIDL   L+      F +T PL+  + GTK GK+   A
Sbjct: 177 LWRRENVRLQIGGSDQWGNITSGIDLIHTLEGNDAPAFGVTIPLMLNSDGTKFGKSEGNA 236

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA----KLQGKEINEAKK 300
           IWL+ E TSPY F+Q+W N DD DVV + K  T L + EI+ +        G+ +  A++
Sbjct: 237 IWLDAEKTSPYTFYQFWLNQDDRDVVKYLKFFTFLTVDEINELEVEVKDNPGQRL--AQR 294

Query: 301 IIATEITTMVHGREEAEKAATAAMECF-----DMSIHS-QHMPTISISKDEVSRGMGLLT 354
            +A E+T  VHG+   ++A   +   F     D+S+   Q + +   S +  S    ++ 
Sbjct: 295 RLAQEVTKFVHGQAAVDEAEQLSQALFSGNISDLSVKQIQSVFSGVPSFEAESHAKNIVD 354

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            +V  G   S  +AR  +++ AI IN   +++   ++  Q       + +  GKK + +
Sbjct: 355 FLVDGGVEKSKRQAREDVQNGAITINGEKVTDVAFEVDPQSHYEGQYVLVRRGKKKYFL 413


>gi|326519552|dbj|BAK00149.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326531108|dbj|BAK04905.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 512

 Score =  231 bits (588), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 147/436 (33%), Positives = 216/436 (49%), Gaps = 52/436 (11%)

Query: 33  QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRR 92
           Q  +  Y G+D TA SLH G+L  L+ L W ++ GH  ++L+GG T  +GDPS +   R 
Sbjct: 78  QQQLKVYCGFDPTAESLHLGNLLGLVALSWFRRCGHTAVALVGGATGRVGDPSGKSAERP 137

Query: 93  MMRSQEIQENIEKIKGIFSSFIKYG--------TGKT-------DAL------------- 124
            +    +  N + IK + +  +           +GK+       DAL             
Sbjct: 138 ELDLAAVVANSDAIKSLIAQILSRAPEPSHHAQSGKSAILEKHEDALAKSGQGLSEESGN 197

Query: 125 ---------MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFN 175
                    +L+N  W   I  +D L+E+G F  V  M++ ESV+ RL  E  +S+ EF 
Sbjct: 198 VGESMGSFVILDNYDWWKDITLLDFLKEVGKFARVGTMIAKESVKKRLNSEDGMSYTEFT 257

Query: 176 YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER-LKTPKLFALTSPLLTTASG 234
           Y +LQ YDF+ + KN    +Q+GGSDQWGNI  G DL  + L+      LT PLL  + G
Sbjct: 258 YQLLQGYDFLYMFKNMGVNVQIGGSDQWGNITAGTDLIRKILQVEGAHGLTFPLLLKSDG 317

Query: 235 TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQ 291
           TK GKT  GAIWL+ +M SPY F+QY+ ++ D DVV F + LT L + EI  +    K  
Sbjct: 318 TKFGKTEDGAIWLSSKMLSPYKFYQYFFSVPDVDVVRFMRILTFLSLDEIHELEESMKKP 377

Query: 292 GKEINEAKKIIATEITTMVHGR---EEAEKAATAAMECFDMSIHSQ-------HMPTISI 341
           G   N  ++ +A E+T  VHG+   EEA KA  A        + SQ        +P+ S+
Sbjct: 378 GYVPNTVQRRLAEEVTLFVHGQEGLEEALKATEALRPGAQTQLDSQTIEGIADDVPSCSL 437

Query: 342 SKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
             D+V +   L+ L    G   S +  RR +K   + +NN  I +E   ++  D      
Sbjct: 438 PYDQVLKSP-LVDLAASTGLLASKSAVRRLIKQGGLYLNNKKIDSEDKLVEEGDIVDGKV 496

Query: 402 IKLSFGKKNHIICHLC 417
           + LS GKKN ++  + 
Sbjct: 497 LLLSAGKKNKMVVRIS 512


>gi|329350575|gb|AEB91324.1| tyrosyl-tRNA synthetase [Sporolactobacillus sp. P3J]
          Length = 388

 Score =  230 bits (586), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 134/386 (34%), Positives = 208/386 (53%), Gaps = 23/386 (5%)

Query: 45  TASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIE 104
           T  S+H GHL   M++   +  GH P  L+GG T  IGDPS R   R++   +++  N+ 
Sbjct: 10  TGDSMHIGHLIPFMMMKRFELAGHHPYILIGGATGSIGDPSGRKTERQLQAMEKVNHNV- 68

Query: 105 KIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK 164
             K + +   +   G  +  M+NN  WL  +  +D LR+ G   +VN ML+ + V SRL 
Sbjct: 69  --KALSAQMKRLFGGDANVTMVNNYEWLSKVSLLDFLRDYGKVVNVNTMLAKDIVASRL- 125

Query: 165 REQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK--TPKLF 222
            E  +S+ EF Y ILQ+ DF+ L + +  +LQ+GG+DQWGNI  GID+  +++    + +
Sbjct: 126 -EDGISYTEFTYQILQSVDFLTLHRVHHVQLQIGGADQWGNITSGIDMIHKIEGSDTEAY 184

Query: 223 ALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMS 282
            LT PL+  A GTK GKT  GAIWL+ + TSPY F+Q+W N DD DVV   K  T L   
Sbjct: 185 GLTIPLMLKADGTKFGKTAGGAIWLDPKKTSPYEFYQFWLNQDDRDVVKNLKFFTFLSQD 244

Query: 283 EIDRMA-KLQGK-EINEAKKIIATEITTMVHGREEAEKAATAAMECF-----DMSIHS-- 333
           EI  +A K++ + E  EA++ +A E+T  VHG+E   KA   +   F     D+S+    
Sbjct: 245 EIGELAQKVETEPEKREAQRRLAEEVTRFVHGQEAMNKAEKISDTLFSGDIKDLSVAEIQ 304

Query: 334 ---QHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQ 390
              + +P + +S    S    ++  +V      S  +AR  L + A+ IN   ++N + +
Sbjct: 305 EAFERVPNVKVS----SEPKNIVEWLVDTKIEPSKRQAREDLINGAVTINGDRVTNVEAE 360

Query: 391 IKLQDFDSTGNIKLSFGKKNHIICHL 416
           +   D  +   I +  GKKN+ +  +
Sbjct: 361 VNPADHYAGKFIVVRKGKKNYFLARV 386


>gi|227432816|ref|ZP_03914776.1| tyrosyl-tRNA synthetase [Leuconostoc mesenteroides subsp. cremoris
           ATCC 19254]
 gi|227351430|gb|EEJ41696.1| tyrosyl-tRNA synthetase [Leuconostoc mesenteroides subsp. cremoris
           ATCC 19254]
          Length = 417

 Score =  230 bits (586), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 145/402 (36%), Positives = 216/402 (53%), Gaps = 31/402 (7%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG ++Q+++   L    + G + AY+G D TA SLH GHL   M+L   Q  
Sbjct: 4   NFIEDLKWRGALNQVTDEAGLIEAMASGEIGAYVGTDPTADSLHLGHLIPFMVLKRFQNA 63

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK-YGTGKTDALM 125
           G K + ++GG T  IGDP    E R+++  +++++N    KGI     K +G  KT   +
Sbjct: 64  GGKAVIIIGGATGAIGDPRPTTE-RQLLSPEQLRQNE---KGITEQVTKLFGDEKT--AI 117

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  WL  +   D LR+ G  FS+N ML  + V SRL  E  +SF EF Y ILQ  D+ 
Sbjct: 118 VNNNDWLGKLTLTDFLRDYGKLFSINVMLKKDVVASRL--ETGISFTEFTYQILQGIDYH 175

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLK--TPKLFALTSPLLTTASGTKMGKTLSG 243
           EL + ++ +LQ+GGSDQWGNI  GIDL   ++      F LT PL+T +SG K GK+   
Sbjct: 176 ELWRRHNVQLQIGGSDQWGNITSGIDLIHSIEGNNATAFGLTIPLMTDSSGKKFGKSEGN 235

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL----QGKEINEAK 299
           AIWLN E TSPY F+Q+W N  D DVV + K  T L + EI+ + +      G  I  A+
Sbjct: 236 AIWLNPEKTSPYTFYQFWYNQSDEDVVKYLKYFTFLGVDEINNLEQEAKNNPGGRI--AQ 293

Query: 300 KIIATEITTMVHGRE---EAEKAA-------TAAMECFDMSIHSQHMPTISISKDEVSRG 349
           K +A E+T  VHG +   +AEK +        A +   D++     +P+  I+    S  
Sbjct: 294 KRLAQEVTKFVHGEQAVADAEKLSAALFSGDVANLSAADIADAFGGVPSFDIT----SEK 349

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
             ++  +V      S  +AR  + + AI I+   +++   +I
Sbjct: 350 KNVVDFLVDGEIEKSKRQAREDVTNGAITISGEKVTDVNFEI 391


>gi|116515016|ref|YP_802645.1| hypothetical protein BCc_075 [Buchnera aphidicola str. Cc (Cinara
           cedri)]
 gi|116256870|gb|ABJ90552.1| tyrosyl-tRNA synthetase [Buchnera aphidicola str. Cc (Cinara
           cedri)]
          Length = 428

 Score =  230 bits (586), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 145/422 (34%), Positives = 227/422 (53%), Gaps = 11/422 (2%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           K++ L  L+++ F  +I N  EL+       V  Y G+D T +SLH GHL  ++ L   Q
Sbjct: 4   KTNILDFLNKKNFFSKIFNQFELNNYLKNKNVFLYCGFDPTENSLHIGHLLPIICLKHFQ 63

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN-IEKIKGIFSSFIKYGTGKTDA 123
             G+ PI L+GG TSI+GDPSF+   R+      ++ N I   K +   F          
Sbjct: 64  NFGYTPIILIGGATSIVGDPSFKIYERKKQSLDLLRFNQICLEKQLLFFFNNQECLNNKV 123

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQS-LSFLEFNYMILQAY 182
           ++LNN +W  +   +  LR+IG +FSVN M+  ESV+ RL +E++ +SF EF+Y +LQAY
Sbjct: 124 IILNNYSWFKNFSILSFLRKIGIYFSVNYMIHKESVKKRLIKEKTGMSFTEFSYSLLQAY 183

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DF++L + Y  +LQ+GGSDQWGNI+ GI L ++L    +F  T+ LL  ++G K GKT +
Sbjct: 184 DFLKLYEKYGVKLQIGGSDQWGNILSGIRLIKKLYKDDVFGATNSLLVKSNGEKFGKTET 243

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKK 300
             IWL+ + TSP+ F+Q+W NI D D+ +F +  T +   +I+ +       K I   K 
Sbjct: 244 DTIWLDAKKTSPFKFYQFWVNISDEDIDNFLQWFTFIDEKKINILFHDNNFIKNIINKKI 303

Query: 301 IIATEITTMVHGREEAEKAATAAMECF-DMSIHS-QHMPTISISKDEV-----SRGMGLL 353
            +A  +T +VHG++            F + SI + +    I + KD +     +  + L 
Sbjct: 304 FLAEFLTKLVHGKDVLISVKRIIFFLFGNGSITNIKEEDCIQLLKDGIPSIICNSFLDLP 363

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            ++VK     S N+AR  + S AIKIN  + + +       D        +S GKKN+ +
Sbjct: 364 HILVKTLLVNSLNKARNMIISGAIKINGIVQTQKDYNFSKSDLLFNKYTFISKGKKNYFL 423

Query: 414 CH 415
            +
Sbjct: 424 IY 425


>gi|255660042|ref|ZP_05405451.1| tyrosyl-tRNA synthetase [Mycoplasma genitalium G37]
          Length = 334

 Score =  230 bits (586), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 122/315 (38%), Positives = 189/315 (60%), Gaps = 16/315 (5%)

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P  ++G  T++IGDP+ R E R+++  +EI +N + IK     F+       D ++ 
Sbjct: 2   GHTPHIVLGSATALIGDPTGRIELRKILEEKEIVKNTKTIKKQIKQFL------GDVIIH 55

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
            N+ WL  + YI+++RE+G+FFSVN+MLS ++  +R   E+ L+ +E NYMILQAYDF  
Sbjct: 56  ENKVWLEKLNYIEVIRELGAFFSVNKMLSTDAFSARW--EKGLTLMELNYMILQAYDFYY 113

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L KN++  LQ+GGSDQW NI+ G +L +R     +F LT+ LL  A+G KMGKT SGA+W
Sbjct: 114 LHKNHNVTLQIGGSDQWANILAGANLIKRKNNASVFGLTANLLVKANGEKMGKTSSGALW 173

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           L++  TS ++F+QYW N+DD  +      LT L    ID +  L+G +I + K+++A  I
Sbjct: 174 LDENKTSVFDFYQYWINLDDQSLKKTFLMLTMLDKKVIDELCNLKGPKIKQTKQMLAFLI 233

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
           T ++HG ++A++A   +   F       + P + I    V     L+  +V+  F  S +
Sbjct: 234 TELIHGTKKAKEAQQRSELIFS------NQPDLDIKL--VKTSTNLIDYLVETKFIKSKS 285

Query: 367 EARRHLKSNAIKINN 381
           EARR +    + INN
Sbjct: 286 EARRLISQKGLTINN 300


>gi|319937189|ref|ZP_08011596.1| tyrosyl-tRNA synthetase [Coprobacillus sp. 29_1]
 gi|319807555|gb|EFW04148.1| tyrosyl-tRNA synthetase [Coprobacillus sp. 29_1]
          Length = 408

 Score =  229 bits (585), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 136/408 (33%), Positives = 219/408 (53%), Gaps = 18/408 (4%)

Query: 15  RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLM 74
           RG I  +S+P E++   + G +T YIG D T  SLH GH +  ++   L+  GH PI L+
Sbjct: 10  RGLIKDVSSP-EVEEKLNNGGMTFYIGTDPTGDSLHIGHFSSFLISKRLKDAGHNPILLV 68

Query: 75  GGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCS 134
           GG T +IGDP   D  R M+  +++Q N + +K        +        ++NN  W   
Sbjct: 69  GGATGLIGDPK-PDTERPMITREQVQHNFDCLKKQAQDLFGFE-------VVNNYDWSKD 120

Query: 135 IKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCR 194
           + +ID LR+ G +F+VN ML+ + V+ RL  +  +++ EF+YMI+QA DF  L +N DC 
Sbjct: 121 LNFIDFLRDYGKYFNVNYMLNKDIVKRRL--DLGITYTEFSYMIMQAMDFYWLYENKDCH 178

Query: 195 LQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSP 254
           +Q+ G DQWGNI  GI+L  +    + +  T PLLT + GTK GKT   AIWL++E TSP
Sbjct: 179 MQVAGQDQWGNITAGIELIRKKSGKEAYGFTMPLLTKSDGTKFGKTNGHAIWLDREKTSP 238

Query: 255 YNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE--INEAKKIIATEITTMVHG 312
           Y  +Q++ N +D  V+ + K LT L   EI+ + +    +  + EA K +A E+ T VH 
Sbjct: 239 YEMYQFFINSEDEKVIDYLKFLTFLSKEEIEELEEKNKTQPHLREAHKALAKEVITFVHD 298

Query: 313 REEAEKAATAAMECFDMSIHSQHMPTIS-----ISKDEVSRGMGLLTLIVKAGFATSTNE 367
               E+A   +   F   I +  +  +      +   E+     +L  +V+ G A+S  E
Sbjct: 299 EAAYEEALEISQMLFSGKIQTLTLAQVQSCFNGVPSIEMEEDTKILNALVQVGAASSNRE 358

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           AR+ +   ++ IN   +++ +  IK ++        +  GKKN+ + +
Sbjct: 359 ARQFVTGGSVLINGEKVTDVEFVIKKENAFGKEATVIRRGKKNYYVIN 406


>gi|116619116|ref|YP_819487.1| tyrosyl-tRNA synthetase [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
 gi|122270684|sp|Q03UK8|SYY_LEUMM RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|116097963|gb|ABJ63114.1| tyrosyl-tRNA synthetase [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
          Length = 415

 Score =  229 bits (585), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 145/402 (36%), Positives = 216/402 (53%), Gaps = 31/402 (7%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG ++Q+++   L    + G + AY+G D TA SLH GHL   M+L   Q  
Sbjct: 2   NFIEDLKWRGALNQVTDEAGLIEAMASGEIGAYVGTDPTADSLHLGHLIPFMVLKRFQNA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK-YGTGKTDALM 125
           G K + ++GG T  IGDP    E R+++  +++++N    KGI     K +G  KT   +
Sbjct: 62  GGKAVIIIGGATGAIGDPRPTTE-RQLLSPEQLRQNE---KGITEQVTKLFGDEKT--AI 115

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  WL  +   D LR+ G  FS+N ML  + V SRL  E  +SF EF Y ILQ  D+ 
Sbjct: 116 VNNNDWLGKLTLTDFLRDYGKLFSINVMLKKDVVASRL--ETGISFTEFTYQILQGIDYH 173

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLK--TPKLFALTSPLLTTASGTKMGKTLSG 243
           EL + ++ +LQ+GGSDQWGNI  GIDL   ++      F LT PL+T +SG K GK+   
Sbjct: 174 ELWRRHNVQLQIGGSDQWGNITSGIDLIHSIEGNNATAFGLTIPLMTDSSGKKFGKSEGN 233

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL----QGKEINEAK 299
           AIWLN E TSPY F+Q+W N  D DVV + K  T L + EI+ + +      G  I  A+
Sbjct: 234 AIWLNPEKTSPYTFYQFWYNQSDEDVVKYLKYFTFLGVDEINNLEQEAKNNPGGRI--AQ 291

Query: 300 KIIATEITTMVHGRE---EAEKAA-------TAAMECFDMSIHSQHMPTISISKDEVSRG 349
           K +A E+T  VHG +   +AEK +        A +   D++     +P+  I+    S  
Sbjct: 292 KRLAQEVTKFVHGEQAVADAEKLSAALFSGDVANLSAADIADAFGGVPSFDIT----SEK 347

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
             ++  +V      S  +AR  + + AI I+   +++   +I
Sbjct: 348 KNVVDFLVDGEVEKSKRQAREDVTNGAITISGEKVTDVNFEI 389


>gi|196018135|ref|XP_002118742.1| hypothetical protein TRIADDRAFT_62757 [Trichoplax adhaerens]
 gi|190578316|gb|EDV18769.1| hypothetical protein TRIADDRAFT_62757 [Trichoplax adhaerens]
          Length = 241

 Score =  229 bits (584), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 111/240 (46%), Positives = 155/240 (64%), Gaps = 1/240 (0%)

Query: 177 MILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTK 236
           M+LQA+DF  L     C LQMGGSDQWGNI+ G++L  +    + F LTSPLLTT+SG K
Sbjct: 1   MLLQAFDFYHLYNKEQCVLQMGGSDQWGNIVNGVELIRKKLGKEAFGLTSPLLTTSSGAK 60

Query: 237 MGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN 296
           MGKT SGA+WLN++  SPY +WQ+WRN +DADV+ F K  T LP+  I+ ++KL GKEIN
Sbjct: 61  MGKTASGAVWLNEDTLSPYEYWQFWRNTEDADVIKFLKLFTELPLKYINELSKLSGKEIN 120

Query: 297 EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLI 356
            AK I+A E T + HG E A  A + + + F+ +    ++P   +S  E+  GM L  L+
Sbjct: 121 GAKIILADEATKLCHGIEAANSAKSTSKQTFEDNNIDNNLPKYEVSSIEIKNGMMLFKLL 180

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V    A S + AR+ ++ N I+INN+++S+    I   DFD   N+KLS GKK H++  +
Sbjct: 181 VSCNLAASNSAARKLIQGNGIRINNNVVSDINYIIHQDDFDDK-NLKLSVGKKKHMLVKV 239


>gi|237734570|ref|ZP_04565051.1| tyrosyl-tRNA synthetase [Mollicutes bacterium D7]
 gi|229382390|gb|EEO32481.1| tyrosyl-tRNA synthetase [Coprobacillus sp. D7]
          Length = 408

 Score =  229 bits (583), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 140/411 (34%), Positives = 219/411 (53%), Gaps = 21/411 (5%)

Query: 15  RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLM 74
           RG I  +S+P +L+   + G +T YIG D T  SLH GH +  ++   L++ GH PI L+
Sbjct: 10  RGLIKDVSSP-DLEEKLNNGGMTFYIGTDPTGDSLHIGHFSSFLISKRLKEAGHNPILLV 68

Query: 75  GGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCS 134
           GG T +IGDP   D  R M+  + ++ N       F+   K         ++NN  W   
Sbjct: 69  GGATGLIGDPK-PDTERPMITKETVEHN-------FACLKKQAQDLFGFEVVNNYDWSKD 120

Query: 135 IKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCR 194
           + +ID LR+ G +F++N ML+ + V+ RL  +  +++ EF+YMI+QA DF  L  N +C 
Sbjct: 121 LNFIDFLRDYGKYFNINYMLNKDIVKRRL--DAGITYTEFSYMIMQAMDFEWLYNNKNCV 178

Query: 195 LQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSP 254
           +Q+ G DQWGNI  GI+L  +    + +  T PLLT + GTK GKT   AIWL++E TSP
Sbjct: 179 MQVAGQDQWGNITAGIELIRKKDGKEAYGFTMPLLTKSDGTKFGKTNGKAIWLDREKTSP 238

Query: 255 YNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE--INEAKKIIATEITTMVHG 312
           Y  +Q++ N +D  V+ + K LT L   EI  + +    +  + EA + +A E+ T +HG
Sbjct: 239 YEMYQFFINSEDDKVIDYLKFLTFLTPEEIMELEEKNKTQPHLREAHQALAREVITFLHG 298

Query: 313 REEAEKAATAAMECFDMSIHSQHMPTISISKD-----EVSRGMGLLTLIVKAGFATSTNE 367
            E  E+A   +   F   I S  +  + +  +     EV+  + +L  +   G A S  E
Sbjct: 299 AEAYEEAVNISKMLFSGQIQSLTLAQVKVCFEGVPSIEVNEDLNILDALTTCGAAKSKRE 358

Query: 368 ARRHLKSNAIKINNSIISN-EKLQIKLQDFDSTGNIKLSFGKKNH-IICHL 416
           AR  +   +I IN   I + E +  K   F +   + +  GKKN+ +I H+
Sbjct: 359 AREFVNGGSILINGERIKDIEFIVTKANAFGNEATV-VRRGKKNYFVIKHI 408


>gi|58259980|ref|XP_567400.1| tyrosine-tRNA ligase [Cryptococcus neoformans var. neoformans
           JEC21]
 gi|134116152|ref|XP_773247.1| hypothetical protein CNBJ0260 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50255869|gb|EAL18600.1| hypothetical protein CNBJ0260 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57229450|gb|AAW45883.1| tyrosine-tRNA ligase, putative [Cryptococcus neoformans var.
           neoformans JEC21]
          Length = 478

 Score =  229 bits (583), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 150/459 (32%), Positives = 234/459 (50%), Gaps = 50/459 (10%)

Query: 3   AFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
           A K+  L  L ERGF+  I++ +    + S    T Y G D +ASSLH G+L  L+ L  
Sbjct: 24  APKATVLQELDERGFVAAITSDKLKQHVASP--TTIYSGVDPSASSLHVGNLIPLLGLLH 81

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT---- 118
            Q  GH+ I L+GG T  IGDPS R   R+ +   E++ NI  I      F   G     
Sbjct: 82  FQARGHQSICLIGGATGSIGDPSGRSTERKSLTPSELRLNIAGITSQVHRFFIRGQEYLS 141

Query: 119 ------------GKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE 166
                       G     ++NN  W+  +  +D LR  G    V+ MLS +SV++RL  +
Sbjct: 142 KRGMDLTAMSKDGGRGVKVMNNYDWMRDVSLLDFLRTTGKMARVSTMLSRDSVKNRLSSD 201

Query: 167 QSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL------------GE 214
             +S+ EF Y +LQAYDF  L   + C +Q+GGSDQWGNI+ GIDL            GE
Sbjct: 202 SGISYTEFTYQLLQAYDFSHLHSEHGCNIQLGGSDQWGNIVAGIDLIRRGKIAEREEKGE 261

Query: 215 RLKTPK--LFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSF 272
           ++K  +  ++ LT PLLTT++G K GK+   A+WL+++ TS   F+Q++    D DV  +
Sbjct: 262 QVKEEEEDVYGLTIPLLTTSTGEKFGKSAGNAVWLDEKRTSAAEFYQFFLRTTDEDVEKY 321

Query: 273 AKRLTTLPMSEIDRMAKLQGKEINEA----KKIIATEITTMVHGREEAEKAATAAMECFD 328
            K  T LP+S+I  +  +Q  +I++     +K++A E+T +VHG     +A TAA   + 
Sbjct: 322 LKLFTFLPLSQIQDV--MQAHQISKTERLPQKLLAAEVTELVHGPAALTRALTAAQVLYS 379

Query: 329 MSIHSQHMPTI-----------SISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAI 377
            S  S     +            + K+ ++  MG+  + V  G   S  E +R ++S A+
Sbjct: 380 TSTSSLTAEKVLDAFRGDKRFHRVKKENLAE-MGVGKMAVTYGLCGSVGETQRLVQSFAL 438

Query: 378 KINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           ++N+  IS+ + +I ++D        +  G K  II ++
Sbjct: 439 QVNDRKISDHREKIAVEDLVDGHIAIVRAGNKRQIILYV 477


>gi|330861036|emb|CBX71307.1| tyrosyl-tRNA synthetase [Yersinia enterocolitica W22703]
          Length = 347

 Score =  229 bits (583), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 129/316 (40%), Positives = 182/316 (57%), Gaps = 21/316 (6%)

Query: 80  IIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYID 139
           +IGDPSF+   R++     + E +EKI+   S F+ +  G+  A+  NN  W   +  + 
Sbjct: 1   MIGDPSFKASERKLNTEDTVNEWVEKIRRQVSPFLDFDCGENSAIAANNYDWFGGMNVLT 60

Query: 140 LLREIGSFFSVNRMLSFESVRSRLKREQS-LSFLEFNYMILQAYDFVELAKNYDCRLQMG 198
            LR+IG  FSVN+M++ E+V+ RL R+ S +SF EF+Y +LQAYDF  L K +   LQ+G
Sbjct: 61  FLRDIGKHFSVNQMINKEAVKQRLNRDDSGISFTEFSYNLLQAYDFACLNKAHGVALQIG 120

Query: 199 GSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFW 258
           GSDQWGNI  GIDL  RL   +++ LT PL+T A GTK GKT  GA+WL+ + TSPY F+
Sbjct: 121 GSDQWGNITSGIDLTRRLHQQQVYGLTVPLITKADGTKFGKTEGGAVWLDPKKTSPYKFY 180

Query: 259 QYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKIIATEITTMVHGRE- 314
           Q+W N  DADV  F K  T + + EI+ +    K  GK    A+ ++A  +T MVHG E 
Sbjct: 181 QFWINTADADVYRFLKFFTFMSLEEINALEEEDKNSGK-APRAQYVLAENVTGMVHGEEG 239

Query: 315 -EAEKAATAAMECFDMS---------IHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
             A K  TA++   D++         +    MPTI     E++R   L   +V A    S
Sbjct: 240 LAAAKRITASLFSGDLNDMTEADFAQLAQDGMPTI-----ELTRDADLQQALVNAELVPS 294

Query: 365 TNEARRHLKSNAIKIN 380
             +AR  + SNA+ IN
Sbjct: 295 RGQARTMISSNAVAIN 310


>gi|329769229|ref|ZP_08260648.1| tyrosyl-tRNA synthetase [Gemella sanguinis M325]
 gi|328839360|gb|EGF88940.1| tyrosyl-tRNA synthetase [Gemella sanguinis M325]
          Length = 417

 Score =  229 bits (583), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 132/394 (33%), Positives = 212/394 (53%), Gaps = 22/394 (5%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S  L  L  R  ++Q ++   +  L     V+ Y G D T  SLH GHL   + L    +
Sbjct: 2   SKLLDDLKFRDLVYQQTDEEGIAKLLENESVSIYCGTDPTGDSLHVGHLLPFLTLRRFAQ 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP+ L+GGGT IIGDPS R E R++   + + EN +K++    +  +   G  +   
Sbjct: 62  HGHKPVVLVGGGTGIIGDPSGRSEERQLQSLETVAENAKKLENQLRNIFR---GHDNIEF 118

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  WL  +  I+ LR+ G   +VN +L+ +SV SRL  E  LSF EF+Y +LQ  D+ 
Sbjct: 119 VNNGDWLGKLSMIEFLRDYGKLINVNYLLAKDSVSSRL--ENGLSFTEFSYALLQGIDYA 176

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLLTTASGTKMGKTLSGA 244
            L ++++ ++Q+GGSDQWGNI  G+++  +L+   + +  T PL+  + GTK GK+  GA
Sbjct: 177 HLNEHHNVKIQLGGSDQWGNITTGLEIMRKLRGDVEAYGFTIPLMLKSDGTKFGKSTGGA 236

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE--INEAKKII 302
           +WL+ E T+PY F+Q+W N  D+DV+S  K+ T L   EI+++ +   KE  +  A+K +
Sbjct: 237 VWLDPEKTTPYEFYQFWFNTADSDVISAIKKFTFLEREEIEKLEESVEKEPHLRLAQKAL 296

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGL 352
           A E+  +VHG +  E A       F  ++            + MP     K E +    +
Sbjct: 297 AEELVKIVHGEKALESALNITKALFSGNVKELTHDELQEAVKGMPKSEAEKKEYN----I 352

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISN 386
           +  +V+     S  +AR  + + AI +N   I++
Sbjct: 353 VDFLVETKLVQSKRQAREDVNNGAIYVNGDRITD 386


>gi|167756860|ref|ZP_02428987.1| hypothetical protein CLORAM_02409 [Clostridium ramosum DSM 1402]
 gi|167703035|gb|EDS17614.1| hypothetical protein CLORAM_02409 [Clostridium ramosum DSM 1402]
          Length = 408

 Score =  229 bits (583), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 138/407 (33%), Positives = 216/407 (53%), Gaps = 20/407 (4%)

Query: 15  RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLM 74
           RG I  +S+P +L+   + G +T YIG D T  SLH GH +  ++   L++ GH PI L+
Sbjct: 10  RGLIKDVSSP-DLEEKLNNGGMTFYIGTDPTGDSLHIGHFSSFLISKRLKEAGHNPILLV 68

Query: 75  GGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCS 134
           GG T +IGDP   D  R M+  + ++ N       F+   K         ++NN  W   
Sbjct: 69  GGATGLIGDPK-PDTERPMITKETVEHN-------FACLKKQAQDLFGFEVVNNYDWSKD 120

Query: 135 IKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCR 194
           + +ID LR+ G +F++N ML+ + V+ RL  +  +++ EF+YMI+QA DF  L  N +C 
Sbjct: 121 LNFIDFLRDYGKYFNINYMLNKDIVKRRL--DAGITYTEFSYMIMQAMDFEWLYNNKNCV 178

Query: 195 LQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSP 254
           +Q+ G DQWGNI  GI+L  +    + +  T PLLT + GTK GKT   AIWL++E TSP
Sbjct: 179 MQVAGQDQWGNITAGIELIRKKDGKEAYGFTMPLLTKSDGTKFGKTNGKAIWLDREKTSP 238

Query: 255 YNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE--INEAKKIIATEITTMVHG 312
           Y  +Q++ N +D  V+ + K LT L   EI  + +    +  + EA + +A E+ T +HG
Sbjct: 239 YEMYQFFINSEDDKVIDYLKFLTFLTPEEIMELEEKNKTQPHLREAHQALAREVITFLHG 298

Query: 313 REEAEKAATAAMECFDMSIHSQHMPTISISKD-----EVSRGMGLLTLIVKAGFATSTNE 367
            E  E+A   +   F   I S  +  + +  +     EV+  + +L  +   G A S  E
Sbjct: 299 AEAYEEAVNISKMLFSGQIQSLTLAQVKVCFEGVPSIEVNEELNILDALTTCGAAKSKRE 358

Query: 368 ARRHLKSNAIKINNSIISN-EKLQIKLQDFDSTGNIKLSFGKKNHII 413
           AR  +   +I IN   I + E +  K   F +   + +  GKKN+ +
Sbjct: 359 AREFVNGGSILINGERIKDVEFIVTKANAFGNEATV-VRRGKKNYFV 404


>gi|257893804|ref|ZP_05673457.1| tyrosyl-tRNA synthetase [Enterococcus faecium 1,231,408]
 gi|257830183|gb|EEV56790.1| tyrosyl-tRNA synthetase [Enterococcus faecium 1,231,408]
          Length = 407

 Score =  228 bits (582), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 150/402 (37%), Positives = 217/402 (53%), Gaps = 26/402 (6%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L+ R  I+Q +N   L  L  +  ++ Y G D T  S+H GHL   M++   Q  GH P 
Sbjct: 7   LTWRDAINQQTNEERLRELVEEKSISLYCGVDPTGDSMHIGHLIPFMMMKRFQLAGHHPY 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK-TDALMLNNET 130
            L+GGGT  IGDPS R   R +   +++Q N++ +    S+ ++   GK  +   +NN  
Sbjct: 67  ILIGGGTGTIGDPSGRKTERVLQTMEQVQHNVDAL----SNQMRKLFGKDANITFVNNYD 122

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           WL  I  ++ LR+ G  F++N ML+ + V SRL  E  +SF EF Y ILQ+ DF+ L K 
Sbjct: 123 WLSKISLLEFLRDYGKNFNINTMLAKDIVASRL--EVGISFTEFTYQILQSIDFLHLHKT 180

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKL--FALTSPLLTTASGTKMGKTLSGAIWLN 248
           YD +LQ+GG+DQWGNI  G+DL  +L+ P+   F LT PL+  A GTK GKT  GAIWL+
Sbjct: 181 YDVQLQIGGADQWGNITAGLDLIRKLEGPEAEAFGLTIPLMLKADGTKFGKTAGGAIWLD 240

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIATEI 306
            + TSP+ F+Q+W N DD DVV + K  T L   EI+ +AK      E  EA++ +A E+
Sbjct: 241 PKKTSPFEFYQFWLNQDDRDVVKYLKFFTFLSQEEIEELAKKVETEPEKREAQRRLAEEV 300

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQH----------MPTISISKDEVSRGMGLLTLI 356
           T  VH  E+ ++A       F  +I   +          MP + IS    S    ++ L+
Sbjct: 301 TRFVHSEEDLKEAQKITQALFSGNIKELNAEEIAQGFGKMPNVEIS----STPENIVELL 356

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD-FD 397
           V      S  +AR  + + AI IN   +++    I   D FD
Sbjct: 357 VSTKIEPSKRQAREDVSNGAISINGDRVTDLNFVINPSDEFD 398


>gi|293572271|ref|ZP_06683270.1| tyrosyl-tRNA synthetase [Enterococcus faecium E980]
 gi|291607730|gb|EFF37053.1| tyrosyl-tRNA synthetase [Enterococcus faecium E980]
          Length = 418

 Score =  228 bits (582), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 150/421 (35%), Positives = 223/421 (52%), Gaps = 25/421 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L+ R  I+Q +N   L  L  +  ++ Y G D T  S+H GHL   M++   Q  GH P 
Sbjct: 7   LTWRDAINQQTNEERLRELVEEKSISLYCGVDPTGDSMHIGHLIPFMMMKRFQLAGHHPY 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK-TDALMLNNET 130
            L+GGGT  IGDPS R   R +   +++Q N++ +    S+ ++   GK  +   +NN  
Sbjct: 67  ILIGGGTGTIGDPSGRKTERVLQTMEQVQHNVDAL----SNQMRKLFGKDANITFVNNYD 122

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           WL  I  ++ LR+ G  F++N ML+ + V SRL  E  +SF EF Y ILQ+ DF+ L K 
Sbjct: 123 WLSKISLLEFLRDYGKNFNINTMLAKDIVASRL--EVGISFTEFTYQILQSIDFLHLHKT 180

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLK--TPKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
           YD +LQ+GG+DQWGNI  G+DL  +L+    + F LT PL+  A GTK GKT  GA+WL+
Sbjct: 181 YDVQLQIGGADQWGNITAGLDLIRKLEGSEAEAFGLTIPLMLKADGTKFGKTAGGAVWLD 240

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIATEI 306
            + TSP+ F+Q+W N DD DVV + K  T L   EI+ +AK      E  EA++ +A E+
Sbjct: 241 PKKTSPFEFYQFWLNQDDRDVVKYLKFFTFLSQEEIEELAKKVETEPEKREAQRRLAEEV 300

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQH----------MPTISISKDEVSRGMGLLTLI 356
           T  VH  E+ ++A       F  +I   +          MP + IS    S    ++ L+
Sbjct: 301 TRFVHSEEDLKEAQKITQALFSGNIKELNAEEIAQGFGKMPNVEIS----STPENIVELL 356

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V      S  +AR  + + AI IN   +++    I   D      + +  GKKN+ +  +
Sbjct: 357 VSTKIEPSKRQAREDVSNGAISINGDRVTDLNFVINPSDEFDGKFVVIRKGKKNYFLAKV 416

Query: 417 C 417
            
Sbjct: 417 I 417


>gi|242009572|ref|XP_002425557.1| tyrosyl-tRNA synthetase, putative [Pediculus humanus corporis]
 gi|212509436|gb|EEB12819.1| tyrosyl-tRNA synthetase, putative [Pediculus humanus corporis]
          Length = 463

 Score =  227 bits (579), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 143/433 (33%), Positives = 229/433 (52%), Gaps = 33/433 (7%)

Query: 12  LSERGFIHQI----SNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           L ERGF   +    +    LD+L S    T Y G+D TA SLH G+L  L+ L   Q++G
Sbjct: 31  LHERGFYSDLFPYKTADEVLDLLNSADQ-TVYAGFDPTADSLHIGNLLVLINLLHWQRSG 89

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKI----KGIFSSFIKYGTGKTDA 123
           H+ I+L+GG T+ IGDPS +   R  M++  ++EN EKI    K IF + ++Y   K + 
Sbjct: 90  HQVIALIGGATAQIGDPSGKLSERDKMKAHLVEENTEKIENCIKNIFDNHLEYFCDKGET 149

Query: 124 -------LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNY 176
                   ++NN  W C++  ++ +  IG  F +  ML  +S+R+R+  ++ LSF EF+Y
Sbjct: 150 HKNIQELQIVNNTDWYCNMSALNFINNIGRNFRLGPMLGKQSIRTRMSTDEGLSFSEFSY 209

Query: 177 MILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTK 236
            I QAYD++ L +NY+CR Q+GGSDQ GNI+ G DL ++     ++ LT PL+TT  G K
Sbjct: 210 QIFQAYDWLHLFQNYNCRFQVGGSDQLGNIVSGYDLIQKFHKVPVYGLTIPLITTEEGDK 269

Query: 237 MGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN 296
            GKT   AIWL+KE TS +  +Q+   I D+DV       T   M +I  +     K  +
Sbjct: 270 FGKTAGNAIWLSKEKTSAFQLYQFLIRIKDSDVQKLLMLFTFETMPKILEIMNEHWKTPH 329

Query: 297 E--AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI------------SIS 342
           +  A+K++A  I  +VHG    ++A       ++ ++  +H+  +            + +
Sbjct: 330 KRIAQKVLAENIVKLVHGPAGLQQAENVTAALYENNL--EHLKKLEPLDLQSVFEGATFT 387

Query: 343 KDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNI 402
           +  +  G  +L   VKAG   + ++A R + +    IN+  ++N +  I +       N+
Sbjct: 388 ELLLEPGTTILEAAVKAGCFKTKSDAVRIISAGGFYINHQKVNNGQEVISMPSHILPNNV 447

Query: 403 KL-SFGKKNHIIC 414
            L   GKKN+ I 
Sbjct: 448 SLMRVGKKNYTIV 460


>gi|194246515|ref|YP_002004154.1| Tyrosyl-tRNA synthetase [Candidatus Phytoplasma mali]
 gi|254783623|sp|B3R0D7|SYY_PHYMT RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|193806872|emb|CAP18301.1| Tyrosyl-tRNA synthetase [Candidatus Phytoplasma mali]
          Length = 417

 Score =  227 bits (579), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 133/390 (34%), Positives = 217/390 (55%), Gaps = 19/390 (4%)

Query: 12  LSERGFIHQISNPRELDILCS-QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           L  R  I + S+ +   +L      +  Y G+D TA SL  GHL Q++    +QK GH P
Sbjct: 7   LKWRNLITECSDEKRAKLLLDGNKKIKFYCGFDATAGSLTVGHLVQIITFLLIQKKGHFP 66

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           I L+GG TS IGDP  + E R+++   +I +N  KI   F   + + + +    ++NN  
Sbjct: 67  IVLLGGATSFIGDPK-KIEERKLLDPSQILDNFNKISLQFKKILSFISFE----IVNNYD 121

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           W+  I  I+ LR+ G  F++N MLS E + +RLK+   LS+ EF+YM+LQ+ DF  L ++
Sbjct: 122 WISKIDVINFLRKYGKLFNINYMLSKEVIANRLKK--GLSYAEFSYMVLQSLDFQYLFEH 179

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLK----TPKLFALTSPLLTTASGTKMGKTLSGAIW 246
            +  +Q GGSDQWGNI  G++L  ++       K   +T+ LL  + GTK GK+  G +W
Sbjct: 180 KNVIMQFGGSDQWGNITSGLELIRKINKIKDNDKPVGMTNALLLKSDGTKFGKSEDGVLW 239

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIAT 304
           L++++TSPY  +QY+ N +D +VV++ K LT L   EI  + +  +   +   A+KI+A 
Sbjct: 240 LDQKLTSPYKIYQYFLNTEDKEVVNYLKSLTLLSKKEIINLKEENIVNPQKRLAQKILAK 299

Query: 305 EITTMVHGREEAEKAATAAMECF-----DMSIHSQHMPTISISKDEVSRGMGLLTLIVKA 359
           EI T++HG++  E         F      +S  S +    +++  EV+  + LL  +V  
Sbjct: 300 EIITLIHGKKIFENCFNTNQALFVGKKDQLSEQSFYFLKYTLNYIEVNDKISLLEALVFT 359

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKL 389
               S N+A+  + ++AIKI + I+ + +L
Sbjct: 360 KLTNSKNKAKELISNHAIKIFDQIVDDTEL 389


>gi|315018872|gb|ADT70675.1| TyrS [Enterococcus faecium]
          Length = 383

 Score =  227 bits (579), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 143/392 (36%), Positives = 210/392 (53%), Gaps = 25/392 (6%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G D T  S+H GHL   M++   Q  GH P  L+GGGT  IGDPS R   R +   +++Q
Sbjct: 1   GVDPTGDSMHIGHLIPFMMMKRFQLAGHHPYILIGGGTGTIGDPSGRKTERVLQTMEQVQ 60

Query: 101 ENIEKIKGIFSSFIKYGTGK-TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
            N++ +    S+ ++   GK  +   +NN  WL  I  ++ LR+ G  F++N ML+ + V
Sbjct: 61  HNVDAL----SNQMRKLFGKDANITFVNNYDWLSKISLLEFLRDYGKNFNINTMLAKDIV 116

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
            SRL  E  +SF EF Y ILQ+ DF+ L K YD +LQ+GG+DQWGNI  G+DL  +L+ P
Sbjct: 117 ASRL--EVGISFTEFTYQILQSIDFLHLHKTYDVQLQIGGADQWGNITAGLDLIRKLEGP 174

Query: 220 KL--FALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT 277
           +   F LT PL+  A GTK GKT  GA+WL+ + TSP+ F+Q+W N DD DVV + K  T
Sbjct: 175 EAEAFGLTIPLMLKADGTKFGKTAGGAVWLDPKKTSPFEFYQFWLNQDDRDVVKYLKFFT 234

Query: 278 TLPMSEIDRMAKL--QGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQH 335
            L   EI+ +AK      E  EA++ +A E+T  VH  E+ ++A       F  +I   +
Sbjct: 235 FLSQEEIEDLAKKVETEPEKREAQRRLAEEVTRFVHSEEDLKEAQKITQALFSGNIKELN 294

Query: 336 ----------MPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIIS 385
                     MP + IS    S    ++ L+V      S  +AR  + + AI IN   ++
Sbjct: 295 AEEIAQGFGKMPNVEIS----STPENIVELLVSTKIEPSKRQAREDVSNGAISINGDRVT 350

Query: 386 NEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           +    I   D      + +  GKKN+ +  + 
Sbjct: 351 DLNFVINPSDEFDGKFVVIRKGKKNYFLAKVI 382


>gi|294155347|ref|YP_003559731.1| tyrosine--tRNA ligase [Mycoplasma crocodyli MP145]
 gi|291600388|gb|ADE19884.1| tyrosine--tRNA ligase [Mycoplasma crocodyli MP145]
          Length = 410

 Score =  227 bits (579), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 133/394 (33%), Positives = 224/394 (56%), Gaps = 23/394 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + L  L  RG ++ ISN  +   L  +G    Y G+D TA SLH G+   ++ L   +K 
Sbjct: 2   NILDDLKARGILNNISNEEKF--LSLKGEPRVYSGFDPTAKSLHLGNYIVILNLLRFKKY 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           G KP +L+GG T +IGDPSF+D  R ++  + + EN  KI+       K+G    D    
Sbjct: 60  GFKPYALIGGATGMIGDPSFKDSERSLLDEKTVLENKTKIR---RQLEKFGLQVVD---- 112

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
            N  +  ++  +D LR +G   +V+ ML+ +SV SR++R   LSF EF+Y ++Q YDF +
Sbjct: 113 -NYDFYKNMSVLDFLRNVGKLLNVSYMLAKDSVASRIER--GLSFTEFSYQLIQGYDFYK 169

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLLTTASGTKMGK-TLSGA 244
           L  +    +Q GGSDQWGN+  G+++  +LK+  K  A+   LLT +SG K GK T  G+
Sbjct: 170 LNVDEQVEVQCGGSDQWGNLTAGLEIINKLKSENKAVAVALNLLTDSSGNKFGKSTGGGS 229

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINEAKKII 302
           +WL+KEM SPYN +Q+  N  D++V    K LT + ++EI+++     +  +++ A++++
Sbjct: 230 LWLDKEMNSPYNLYQFLLNQPDSEVEKLLKWLTLIDINEINKIINKHNENAKLHYAQEVL 289

Query: 303 ATEITTMVHGREEAEKAATAAMECFD--MSIHSQHMPTISISKD-----EVSRGMGLLTL 355
           A  + + VH + +AEKA       FD  + +++  +  I I KD     E+ +G  L+  
Sbjct: 290 AFTVVSDVHSKNDAEKAKKLTSILFDKNLDVNTLTIDDIEIMKDGVELIEIKKGQNLVDE 349

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKL 389
           +++    +S  EAR  + +N++K+N   ++++ L
Sbjct: 350 LIRIKVVSSKREAREFITTNSLKLNQEPVNDQTL 383


>gi|62185046|ref|YP_219831.1| tyrosyl-tRNA synthetase [Chlamydophila abortus S26/3]
 gi|81312787|sp|Q5L661|SYY_CHLAB RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|62148113|emb|CAH63870.1| tyrosyl-tRNA synthetase [Chlamydophila abortus S26/3]
          Length = 412

 Score =  227 bits (578), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 138/424 (32%), Positives = 219/424 (51%), Gaps = 29/424 (6%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           DF+  L +RG +   S+   LD + +   V+AY+G+D TA SLH GH   +  L  +   
Sbjct: 3   DFIQHLQDRGILENFSSG--LDNVSTP--VSAYLGFDPTAPSLHIGHWIGICFLRRMAHF 58

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           G  P++L+G  T +IGDPS +   R ++   ++  N +K+    + ++          ++
Sbjct: 59  GLTPVALVGSATGMIGDPSGKSIERTLLEESQVAYNSQKLSECLAYYLP------GVQIV 112

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL     ID LR++G  F +  ML  ++V+ R++ E+ +S+ EF+YM+LQ+YDF  
Sbjct: 113 NNIDWLKETTVIDFLRDVGKHFRLGVMLGKDTVKQRVQSEEGISYTEFSYMLLQSYDFAY 172

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L +NY   LQ GGSDQWGNI  GID   R    + + LT PLLT + G K+GKT SG IW
Sbjct: 173 LFENYGVCLQCGGSDQWGNITSGIDYIRRHGLGQAYGLTYPLLTNSQGKKIGKTESGTIW 232

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           L+ ++TSPY  +QY+  + D +V   A+ LT L   EI  + +    +    KK +A  +
Sbjct: 233 LDPKLTSPYELYQYFLRLPDQEVPKVARTLTLLSNEEIFDLDQKFLLDPVAVKKFVAETL 292

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISIS--KDEVSRGMGL------------ 352
            T +HG +   +A     +    SIH   + ++S    +D V+ G  +            
Sbjct: 293 VTSIHGEDGLREA-----QVVTQSIHPGKVSSVSEKDFQDLVAMGQAVSLEGTQALGKRW 347

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           + L V  G  +S  EARR ++   + +N+  I NE    +         + L+ GKK  +
Sbjct: 348 IDLFVALGVCSSKGEARRLIEQKGLYVNSEPIENEHSVFEETQVCFDQYVLLAQGKKKKL 407

Query: 413 ICHL 416
           +  L
Sbjct: 408 VLRL 411


>gi|322785930|gb|EFZ12549.1| hypothetical protein SINV_80157 [Solenopsis invicta]
          Length = 404

 Score =  227 bits (578), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 130/370 (35%), Positives = 205/370 (55%), Gaps = 21/370 (5%)

Query: 38  AYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQ 97
            Y G+D TA SLH G+L  LM L   Q+ GH+ I+L+GG T +IGDPS R   R  M   
Sbjct: 14  VYAGFDPTADSLHVGNLLVLMNLLHWQRAGHQVIALVGGATGLIGDPSHRKSERVEMERY 73

Query: 98  EIQENIE----KIKGIFSSFIKY-----GTGKTDALMLNNETWLCSIKYIDLLREIGSFF 148
            I+ENI+     I+ IF++  +Y      T     +++NN  W  ++  I+ +R IG +F
Sbjct: 74  LIEENIKSITKNIETIFNNHQEYFWKNKETALKPLIIVNNLDWYTNVNVIEFIRSIGKYF 133

Query: 149 SVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIIC 208
            +  ML   SV+SRL  +  +SF EF Y + QAYD+++L K Y CR Q+GGSDQ GNI+ 
Sbjct: 134 RMGTMLGRTSVQSRLNSDTGMSFTEFTYQVFQAYDWLQLMKKYKCRFQIGGSDQMGNIMS 193

Query: 209 GIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDAD 268
           G DL  +    +++ +T PL+T   G K GK+L  A+WL+   +SP+  +QY+    D+D
Sbjct: 194 GYDLITKSMRKEVYGITLPLITAEGGKKFGKSLLNAVWLSSTKSSPFQLYQYFIRAKDSD 253

Query: 269 VVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMEC 326
           V  F K  T +P+++I+ + K  +   E   A+K++A ++T +VHG +    A  A+   
Sbjct: 254 VEKFLKLFTFIPLNKIEEIVKSHMNDPERRRAQKLLAEQVTLLVHGEDGLLAAKRASAAL 313

Query: 327 FDMSIHS-QHMPTISISK--------DEVSR-GMGLLTLIVKAGFATSTNEARRHLKSNA 376
           +D SI S   +  + ++         D +S  G+ +  L  KA    S ++A R + +  
Sbjct: 314 YDKSIESFVRLNALELTDVFEGATIVDILSEPGITVYELAKKANCFKSDHDAERIITAGG 373

Query: 377 IKINNSIISN 386
             +N+  I+N
Sbjct: 374 FYVNHQKITN 383


>gi|301762422|ref|XP_002916632.1| PREDICTED: tyrosyl-tRNA synthetase, mitochondrial-like [Ailuropoda
           melanoleuca]
 gi|281349046|gb|EFB24630.1| hypothetical protein PANDA_004722 [Ailuropoda melanoleuca]
          Length = 477

 Score =  226 bits (577), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 133/426 (31%), Positives = 213/426 (50%), Gaps = 22/426 (5%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           F     ERG   +I  P   D        T Y G+D TA SLH GHL  L+ LF  Q+ G
Sbjct: 48  FREFFPERG--TKIELPELFDRGTGNFPQTIYCGFDPTADSLHVGHLLSLLGLFHFQRAG 105

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK-----YGTGKT- 121
           H  I+++GG T+ +GDPS R + R  +  + ++ N   ++    + +      +  G+T 
Sbjct: 106 HNVIAVVGGATARLGDPSGRTKEREALEPERVRSNARALRQGLEAMVANHQQLFANGRTW 165

Query: 122 -DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +L+N  W      +D L  +G  F +  +LS +SV++RLK  + +S  EF Y +LQ
Sbjct: 166 GSFTVLDNSAWYHKQHLVDFLAAVGGQFRMGTLLSRQSVQTRLKSPEGMSLAEFLYQVLQ 225

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDF  L ++Y CR+Q+GGSDQ GNI+ G +   +L    +F +T PL+T+ +G K+GK+
Sbjct: 226 AYDFYHLFQHYGCRVQLGGSDQLGNIMSGYEFIHKLTGEDVFGITVPLITSTTGAKLGKS 285

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--A 298
              A+WLN++ TSP+  +Q++    D  V  + +  T LP+ EID + +L  KE  +   
Sbjct: 286 AGNAVWLNRDKTSPFELYQFFVRQQDDTVERYLRLFTFLPLPEIDHLMQLHDKEPEKRGP 345

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSR 348
           +K +A E+T +VHG+E  + A       +  SI +          +     S S+  +  
Sbjct: 346 QKRLAAEVTKLVHGQEGLDSAKRCTQALYHSSIDALEVMSDQELRELFKEASFSELVLDP 405

Query: 349 GMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISN-EKLQIKLQDFDSTGNIKLSFG 407
           G  +L    KA          R +    + IN+  ++N E + +  Q     G   L  G
Sbjct: 406 GTSVLDTCRKANAIPDGPRGYRMITEGGVSINHKQVTNPESVLVVGQHILKNGLSLLKIG 465

Query: 408 KKNHII 413
           K+N  +
Sbjct: 466 KRNFYV 471


>gi|28493136|ref|NP_787297.1| tyrosyl-tRNA synthetase [Tropheryma whipplei str. Twist]
 gi|28572750|ref|NP_789530.1| tyrosyl-tRNA synthetase [Tropheryma whipplei TW08/27]
 gi|81437905|sp|Q83GS7|SYY_TROWT RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|81629794|sp|Q83HH5|SYY_TROW8 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|28410883|emb|CAD67268.1| tyrosyl-tRNA synthetase [Tropheryma whipplei TW08/27]
 gi|28476176|gb|AAO44266.1| tyrosyl-tRNA synthetase [Tropheryma whipplei str. Twist]
          Length = 471

 Score =  226 bits (577), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 118/315 (37%), Positives = 186/315 (59%), Gaps = 4/315 (1%)

Query: 15  RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLM 74
           RG +   ++   L  L     +  Y G+D TA SLH G+L Q++++  LQ  GH+PI+L+
Sbjct: 17  RGLVCVSTDQGALKELLDGPPIRFYCGFDPTAPSLHVGNLAQILIMRRLQLAGHRPIALV 76

Query: 75  GGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCS 134
           GG T +IGDP    E R++   +++QE +  ++   S F+ +  G   A+++NN  W  S
Sbjct: 77  GGSTGLIGDPRPGGE-RQLHSHEQVQEWVRALQQQLSRFLDF-KGAAAAVLVNNLDWTKS 134

Query: 135 IKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCR 194
           +  +D LRE+G  F VN ML  ++V +RL   + +S+ EF+Y ILQ+ DF +L  +Y C 
Sbjct: 135 LTALDFLRELGKHFRVNAMLKKDAVAARLSSTEGISYTEFSYQILQSLDFRQLYLDYKCV 194

Query: 195 LQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSP 254
           LQ+GGSDQWGNI  G+DL  + +   + A  SPLLT + G+K GKT   AIWL+ ++TSP
Sbjct: 195 LQIGGSDQWGNITSGVDLIRKTEGAGVHAFGSPLLTASDGSKFGKTEGNAIWLDADLTSP 254

Query: 255 YNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATEITTMVHG 312
           ++F+Q++ N DDAD+    +  T    SEI+ + +   +      A + +A  +T +VHG
Sbjct: 255 WSFYQFFLNSDDADIPRLLRVFTFFTRSEIEDLNRSVRENASARLAHRHLAYSVTRLVHG 314

Query: 313 REEAEKAATAAMECF 327
            + A++   A    F
Sbjct: 315 ADVADQVLLACSVLF 329


>gi|255506637|ref|ZP_05382276.1| tyrosyl-tRNA synthetase [Chlamydia trachomatis D(s)2923]
 gi|289525107|emb|CBJ14578.1| tyrosyl-tRNA synthetase [Chlamydia trachomatis Sweden2]
 gi|296434650|gb|ADH16828.1| tyrosyl-tRNA synthetase [Chlamydia trachomatis E/150]
          Length = 412

 Score =  226 bits (575), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 130/369 (35%), Positives = 200/369 (54%), Gaps = 29/369 (7%)

Query: 36  VTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMR 95
           V+AY+G+D TA SLH GH   +  L  L   G  P++L+GG T +IGDPS +   R ++ 
Sbjct: 28  VSAYLGFDPTAPSLHIGHWIGICFLCRLAAYGITPVALVGGATGMIGDPSGKSVERSLLD 87

Query: 96  SQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLS 155
             ++ +N +KI    +S++          ++NN  WL S+  +D LR++G  F +  ML+
Sbjct: 88  QAQVLDNSKKIAAALASYL------PGIRIVNNADWLGSLSMVDFLRDVGKHFRLGSMLA 141

Query: 156 FESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER 215
            + V+ R+  E+ +S+ EF+Y++LQ+YDF  L K ++  LQ GGSDQWGNI  GID   R
Sbjct: 142 KDVVKQRVYSEEGISYTEFSYLLLQSYDFAHLFKEHNVVLQCGGSDQWGNITSGIDYIRR 201

Query: 216 LKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKR 275
               + + LT PLLT + G K+GKT SG IWL+  +T PY  +QY+  + D ++    + 
Sbjct: 202 RGLGQAYGLTYPLLTDSKGKKIGKTESGTIWLDPALTPPYELFQYFLRLPDQEISKVMRT 261

Query: 276 LTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQH 335
           LT L   EI  + +    +    KK IA  I   VHG E   + A AA E F  S     
Sbjct: 262 LTLLDNEEIFALDERLTSDPQAVKKYIAEVIVKDVHGSEGLAQ-AQAATESFFASKGK-- 318

Query: 336 MPTISISKDE----VSRGMGL------------LTLIVKAGFATSTNEARRHLKSNAIKI 379
               SI++ E    V  G+G+            L ++V+ GF +S  +ARR ++   + I
Sbjct: 319 ----SITEAELVALVESGVGVKVARADLIGKRWLDIVVELGFCSSRGQARRLIQQRGLYI 374

Query: 380 NNSIISNEK 388
           N   +++E+
Sbjct: 375 NQEPLADEQ 383


>gi|255310864|ref|ZP_05353434.1| tyrosyl-tRNA synthetase [Chlamydia trachomatis 6276]
 gi|255317164|ref|ZP_05358410.1| tyrosyl-tRNA synthetase [Chlamydia trachomatis 6276s]
 gi|255348425|ref|ZP_05380432.1| tyrosyl-tRNA synthetase [Chlamydia trachomatis 70]
 gi|255502967|ref|ZP_05381357.1| tyrosyl-tRNA synthetase [Chlamydia trachomatis 70s]
 gi|296435579|gb|ADH17753.1| tyrosyl-tRNA synthetase [Chlamydia trachomatis G/9768]
 gi|296436503|gb|ADH18673.1| tyrosyl-tRNA synthetase [Chlamydia trachomatis G/11222]
 gi|296437439|gb|ADH19600.1| tyrosyl-tRNA synthetase [Chlamydia trachomatis G/11074]
 gi|297139938|gb|ADH96696.1| tyrosyl-tRNA synthetase [Chlamydia trachomatis G/9301]
          Length = 412

 Score =  226 bits (575), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 130/369 (35%), Positives = 200/369 (54%), Gaps = 29/369 (7%)

Query: 36  VTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMR 95
           V+AY+G+D TA SLH GH   +  L  L   G  P++L+GG T +IGDPS +   R ++ 
Sbjct: 28  VSAYLGFDPTAPSLHIGHWIGICFLRRLAAYGITPVALVGGATGMIGDPSGKSVERSLLD 87

Query: 96  SQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLS 155
             ++ +N +KI    +S++          ++NN  WL S+  +D LR++G  F +  ML+
Sbjct: 88  QAQVLDNSKKIAATLASYL------PGIRIVNNADWLGSLSMVDFLRDVGKHFRLGSMLA 141

Query: 156 FESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER 215
            + V+ R+  E+ +S+ EF+Y++LQ+YDF  L K ++  LQ GGSDQWGNI  GID   R
Sbjct: 142 KDVVKQRVYSEEGISYTEFSYLLLQSYDFAHLFKEHNVVLQCGGSDQWGNITSGIDYIRR 201

Query: 216 LKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKR 275
               + + LT PLLT + G K+GKT SG IWL+  +T PY  +QY+  + D ++    + 
Sbjct: 202 RGLGQAYGLTYPLLTDSKGKKIGKTESGTIWLDPALTPPYELFQYFLRLPDQEISKVMRT 261

Query: 276 LTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQH 335
           LT L   EI  + +    +    KK IA  I   VHG E   + A AA E F  S     
Sbjct: 262 LTLLDNEEIFALDERLTSDPQAVKKYIAEVIVKDVHGSEGLAQ-AQAATESFFASKGK-- 318

Query: 336 MPTISISKDE----VSRGMGL------------LTLIVKAGFATSTNEARRHLKSNAIKI 379
               SI++ E    V  G+G+            L ++V+ GF +S  +ARR ++   + I
Sbjct: 319 ----SITEAELVALVESGVGVKVARADLIGKRWLDIVVELGFCSSRGQARRLIQQRGLYI 374

Query: 380 NNSIISNEK 388
           N   +++E+
Sbjct: 375 NQEPLADEQ 383


>gi|26333055|dbj|BAC30245.1| unnamed protein product [Mus musculus]
          Length = 403

 Score =  225 bits (574), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 131/397 (32%), Positives = 205/397 (51%), Gaps = 20/397 (5%)

Query: 37  TAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRS 96
           T Y G+D T  SLH GHL  L+ LF  Q+ GH  I+L+GG T+++GDPS R + R  + +
Sbjct: 1   TVYCGFDPTGDSLHVGHLLTLLGLFHFQRAGHNVIALVGGSTALLGDPSGRTKGREALSA 60

Query: 97  QEIQEN-------IEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFS 149
           + ++ N       +E +    +     G       +L+N  W      +D L  +G  F 
Sbjct: 61  ECVRANAHALRRGLEALAANHARLFADGRPWGSFTVLDNAAWFQEQHLVDFLATVGGHFR 120

Query: 150 VNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICG 209
           +  +LS  SV+SRLK  + +S  EF Y +LQAYDF  L ++Y CR+Q+GGSDQ GNI+ G
Sbjct: 121 MGTLLSRLSVQSRLKSPEGMSLAEFFYQVLQAYDFYYLFQHYGCRVQLGGSDQLGNIMSG 180

Query: 210 IDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADV 269
            +   +L    +F +T PL+T+ +G K+GK+   A+WLN+E TSP+  +Q++    D  V
Sbjct: 181 YEFIHKLTGEDVFGITVPLITSTTGAKLGKSAGNAVWLNREKTSPFELYQFFVRQQDDSV 240

Query: 270 VSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATEITTMVHGREEAEKAATAAMECF 327
             + K  T LP+ EID + +L  KE  +  A+K +A E+T +VHG+E  + A       +
Sbjct: 241 ERYLKLFTFLPLPEIDHIMQLHVKEPEKRVAQKRLAAEVTKLVHGQEGLDSAKRCTQALY 300

Query: 328 DMSIHS------QHMPTI----SISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAI 377
             SI +      Q +  +    S S+  +  G  ++    KA          R +    +
Sbjct: 301 HSSIEALEVMSDQELKELFKEASFSELVLDPGTSVIDTCRKANAIPDGPRGYRMITEGGV 360

Query: 378 KINNSIISN-EKLQIKLQDFDSTGNIKLSFGKKNHII 413
            IN+  ++N E + +  Q     G   L  GK+N  I
Sbjct: 361 SINHRQVTNPESVLVIGQHILKNGLSLLKIGKRNFYI 397


>gi|148664996|gb|EDK97412.1| tyrosyl-tRNA synthetase 2 (mitochondrial), isoform CRA_a [Mus
           musculus]
          Length = 479

 Score =  225 bits (574), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 131/397 (32%), Positives = 205/397 (51%), Gaps = 20/397 (5%)

Query: 37  TAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRS 96
           T Y G+D T  SLH GHL  L+ LF  Q+ GH  I+L+GG T+++GDPS R + R  + +
Sbjct: 77  TVYCGFDPTGDSLHVGHLLTLLGLFHFQRAGHNVIALVGGSTALLGDPSGRTKGREALSA 136

Query: 97  QEIQEN-------IEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFS 149
           + ++ N       +E +    +     G       +L+N  W      +D L  +G  F 
Sbjct: 137 ECVRANAHALRRGLEALAANHARLFADGRPWGSFTVLDNAAWFQEQHLVDFLATVGGHFR 196

Query: 150 VNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICG 209
           +  +LS  SV+SRLK  + +S  EF Y +LQAYDF  L ++Y CR+Q+GGSDQ GNI+ G
Sbjct: 197 MGTLLSRLSVQSRLKSPEGMSLAEFFYQVLQAYDFYYLFQHYGCRVQLGGSDQLGNIMSG 256

Query: 210 IDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADV 269
            +   +L    +F +T PL+T+ +G K+GK+   A+WLN+E TSP+  +Q++    D  V
Sbjct: 257 YEFIHKLTGEDVFGITVPLITSTTGAKLGKSAGNAVWLNREKTSPFELYQFFVRQQDDSV 316

Query: 270 VSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATEITTMVHGREEAEKAATAAMECF 327
             + K  T LP+ EID + +L  KE  +  A+K +A E+T +VHG+E  + A       +
Sbjct: 317 ERYLKLFTFLPLPEIDHIMQLHVKEPEKRVAQKRLAAEVTKLVHGQEGLDSAKRCTQALY 376

Query: 328 DMSIHS------QHMPTI----SISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAI 377
             SI +      Q +  +    S S+  +  G  ++    KA          R +    +
Sbjct: 377 HSSIEALEVMSDQELKELFKEASFSELVLDPGTSVIDTCRKANAIPDGPRGYRMITEGGV 436

Query: 378 KINNSIISN-EKLQIKLQDFDSTGNIKLSFGKKNHII 413
            IN+  ++N E + +  Q     G   L  GK+N  I
Sbjct: 437 SINHRQVTNPESVLVIGQHILKNGLSLLKIGKRNFYI 473


>gi|76788775|ref|YP_327861.1| tyrosyl-tRNA synthetase [Chlamydia trachomatis A/HAR-13]
 gi|97197647|sp|Q3KMV9|SYY_CHLTA RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|76167305|gb|AAX50313.1| tyrosyl-tRNA synthetase [Chlamydia trachomatis A/HAR-13]
          Length = 412

 Score =  225 bits (574), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 130/369 (35%), Positives = 200/369 (54%), Gaps = 29/369 (7%)

Query: 36  VTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMR 95
           V+AY+G+D TA SLH GH   +  L  L   G  P++L+GG T +IGDPS +   R ++ 
Sbjct: 28  VSAYLGFDPTAPSLHIGHWIGICFLRRLAAYGITPVALVGGATGMIGDPSGKSVERSLLD 87

Query: 96  SQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLS 155
             ++ +N +KI    +S++          ++NN  WL S+  +D LR++G  F +  ML+
Sbjct: 88  QAQVLDNSKKIAAALASYL------PGIRIVNNADWLGSLSMVDFLRDVGKHFRLGSMLA 141

Query: 156 FESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER 215
            + V+ R+  E+ +S+ EF+Y++LQ+YDF  L K ++  LQ GGSDQWGNI  GID   R
Sbjct: 142 KDVVKQRVYSEEGISYTEFSYLLLQSYDFAHLFKEHNVVLQCGGSDQWGNITSGIDYIRR 201

Query: 216 LKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKR 275
               + + LT PLLT + G K+GKT SG IWL+  +T PY  +QY+  + D ++    + 
Sbjct: 202 RGLGQAYGLTYPLLTDSKGKKIGKTESGTIWLDPALTPPYELFQYFLRLPDQEISKVMRT 261

Query: 276 LTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQH 335
           LT L   EI  + +    +    KK IA  I   VHG E   + A AA E F  S     
Sbjct: 262 LTLLDNEEIFALDERLTSDPQAVKKYIAEVIVKDVHGSEGLAQ-AQAATESFFASKGK-- 318

Query: 336 MPTISISKDE----VSRGMGL------------LTLIVKAGFATSTNEARRHLKSNAIKI 379
               SI++ E    V  G+G+            L ++V+ GF +S  +ARR ++   + I
Sbjct: 319 ----SITEAELVALVESGVGVKVARTDLIGKRWLDIVVELGFCSSRGQARRLIQQRGLYI 374

Query: 380 NNSIISNEK 388
           N   +++E+
Sbjct: 375 NQEPLADEQ 383


>gi|15604781|ref|NP_219565.1| tyrosyl-tRNA synthetase [Chlamydia trachomatis D/UW-3/CX]
 gi|166154283|ref|YP_001654401.1| tyrosyl-tRNA synthetase [Chlamydia trachomatis 434/Bu]
 gi|166155158|ref|YP_001653413.1| tyrosyl-tRNA synthetase [Chlamydia trachomatis L2b/UCH-1/proctitis]
 gi|237802496|ref|YP_002887690.1| tyrosyl-tRNA synthetase [Chlamydia trachomatis B/Jali20/OT]
 gi|301335534|ref|ZP_07223778.1| tyrosyl-tRNA synthetase [Chlamydia trachomatis L2tet1]
 gi|14195228|sp|O84065|SYY_CHLTR RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|254783579|sp|B0B9H0|SYY_CHLT2 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|254783580|sp|B0BB49|SYY_CHLTB RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|3328456|gb|AAC67653.1| tyrosyl tRNA Synthetase [Chlamydia trachomatis D/UW-3/CX]
 gi|165930271|emb|CAP03757.1| tyrosyl-tRNA synthetase [Chlamydia trachomatis 434/Bu]
 gi|165931146|emb|CAP06711.1| tyrosyl-tRNA synthetase [Chlamydia trachomatis L2b/UCH-1/proctitis]
 gi|231273730|emb|CAX10509.1| tyrosyl-tRNA synthetase [Chlamydia trachomatis B/Jali20/OT]
 gi|296438367|gb|ADH20520.1| tyrosyl-tRNA synthetase [Chlamydia trachomatis E/11023]
 gi|297748192|gb|ADI50738.1| Tyrosyl-tRNA synthetase [Chlamydia trachomatis D-EC]
 gi|297749072|gb|ADI51750.1| Tyrosyl-tRNA synthetase [Chlamydia trachomatis D-LC]
          Length = 412

 Score =  225 bits (574), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 130/369 (35%), Positives = 200/369 (54%), Gaps = 29/369 (7%)

Query: 36  VTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMR 95
           V+AY+G+D TA SLH GH   +  L  L   G  P++L+GG T +IGDPS +   R ++ 
Sbjct: 28  VSAYLGFDPTAPSLHIGHWIGICFLRRLAAYGITPVALVGGATGMIGDPSGKSVERSLLD 87

Query: 96  SQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLS 155
             ++ +N +KI    +S++          ++NN  WL S+  +D LR++G  F +  ML+
Sbjct: 88  QAQVLDNSKKIAAALASYL------PGIRIVNNADWLGSLSMVDFLRDVGKHFRLGSMLA 141

Query: 156 FESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER 215
            + V+ R+  E+ +S+ EF+Y++LQ+YDF  L K ++  LQ GGSDQWGNI  GID   R
Sbjct: 142 KDVVKQRVYSEEGISYTEFSYLLLQSYDFAHLFKEHNVVLQCGGSDQWGNITSGIDYIRR 201

Query: 216 LKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKR 275
               + + LT PLLT + G K+GKT SG IWL+  +T PY  +QY+  + D ++    + 
Sbjct: 202 RGLGQAYGLTYPLLTDSKGKKIGKTESGTIWLDPALTPPYELFQYFLRLPDQEISKVMRT 261

Query: 276 LTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQH 335
           LT L   EI  + +    +    KK IA  I   VHG E   + A AA E F  S     
Sbjct: 262 LTLLDNEEIFALDERLTSDPQAVKKYIAEVIVKDVHGSEGLAQ-AQAATESFFASKGK-- 318

Query: 336 MPTISISKDE----VSRGMGL------------LTLIVKAGFATSTNEARRHLKSNAIKI 379
               SI++ E    V  G+G+            L ++V+ GF +S  +ARR ++   + I
Sbjct: 319 ----SITEAELVALVESGVGVKVARADLIGKRWLDIVVELGFCSSRGQARRLIQQRGLYI 374

Query: 380 NNSIISNEK 388
           N   +++E+
Sbjct: 375 NQEPLADEQ 383


>gi|156545533|ref|XP_001607236.1| PREDICTED: similar to GA14214-PA [Nasonia vitripennis]
          Length = 438

 Score =  225 bits (574), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 138/388 (35%), Positives = 206/388 (53%), Gaps = 26/388 (6%)

Query: 30  LCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDE 89
           L +Q     Y G+D TA SLH G+L  LM L   Q+ GH+ I+++GG T +IGDPS R  
Sbjct: 17  LVNQNPQCVYAGFDPTADSLHIGNLLVLMNLLHWQRGGHQVIAVVGGATGLIGDPSHRTN 76

Query: 90  SRRMMRSQEIQENIEKIKG----IFSSFIKY-GTGKTDAL----MLNNETWLCSIKYIDL 140
            R  +    +  NI  IK     +F +  KY    K   L    ++NN +W   +  +D 
Sbjct: 77  ERVALDQDVLNSNITSIKKNIVTLFENHEKYFWKDKQYPLPPIKIINNLSWYKDVNILDF 136

Query: 141 LREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGS 200
           +R+IG  F +  ML   SV+SRLK E  +SF EF Y I QAYD+++L   Y+CR Q+GGS
Sbjct: 137 IRDIGKHFRMGTMLGRTSVQSRLKSETGMSFTEFTYQIFQAYDWLQLLNKYNCRFQIGGS 196

Query: 201 DQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQY 260
           DQ GNI+ G +L  R     +F  T PL+T   G K GK+L  AIWL+ + +S +  +QY
Sbjct: 197 DQMGNIMAGHELISRTARLNVFGFTLPLITAEGGKKFGKSLGNAIWLSPKRSSSFQMYQY 256

Query: 261 WRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKKIIATEITTMVHGREEAEK 318
           +    DADV ++ K  T LP+++I+++     Q  E  +A++I+A  +T +VHG E  + 
Sbjct: 257 FIRTTDADVENYLKLFTFLPLNQINQIMVEHRQSPENRKAQQILAENVTLLVHGDEALQA 316

Query: 319 AATAAMECFDMSIHS-------------QHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           A  A +  +D SI S             +    + I  D+    M    L +KA    S 
Sbjct: 317 AKNATLLLYDKSIESLSIMSQEQIAAAFEGANIVDIVPDD--SNMTAFDLAMKAKCFKSE 374

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKL 393
           ++A R +K+ A  IN   +++   +IK 
Sbjct: 375 SDAVRLIKAGAFYINYKRVTDLDEKIKF 402


>gi|39930579|ref|NP_937889.1| tyrosyl-tRNA synthetase, mitochondrial precursor [Mus musculus]
 gi|50401561|sp|Q8BYL4|SYYM_MOUSE RecName: Full=Tyrosyl-tRNA synthetase, mitochondrial; AltName:
           Full=Tyrosine--tRNA ligase; Short=TyrRS; Flags:
           Precursor
 gi|37805338|gb|AAH60295.1| Tyrosyl-tRNA synthetase 2 (mitochondrial) [Mus musculus]
          Length = 472

 Score =  225 bits (573), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 131/397 (32%), Positives = 205/397 (51%), Gaps = 20/397 (5%)

Query: 37  TAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRS 96
           T Y G+D T  SLH GHL  L+ LF  Q+ GH  I+L+GG T+++GDPS R + R  + +
Sbjct: 70  TVYCGFDPTGDSLHVGHLLTLLGLFHFQRAGHNVIALVGGSTALLGDPSGRTKGREALSA 129

Query: 97  QEIQEN-------IEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFS 149
           + ++ N       +E +    +     G       +L+N  W      +D L  +G  F 
Sbjct: 130 ECVRANAHALRRGLEALAANHARLFADGRPWGSFTVLDNAAWFQEQHLVDFLATVGGHFR 189

Query: 150 VNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICG 209
           +  +LS  SV+SRLK  + +S  EF Y +LQAYDF  L ++Y CR+Q+GGSDQ GNI+ G
Sbjct: 190 MGTLLSRLSVQSRLKSPEGMSLAEFFYQVLQAYDFYYLFQHYGCRVQLGGSDQLGNIMSG 249

Query: 210 IDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADV 269
            +   +L    +F +T PL+T+ +G K+GK+   A+WLN+E TSP+  +Q++    D  V
Sbjct: 250 YEFIHKLTGEDVFGITVPLITSTTGAKLGKSAGNAVWLNREKTSPFELYQFFVRQQDDSV 309

Query: 270 VSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATEITTMVHGREEAEKAATAAMECF 327
             + K  T LP+ EID + +L  KE  +  A+K +A E+T +VHG+E  + A       +
Sbjct: 310 ERYLKLFTFLPLPEIDHIMQLHVKEPEKRVAQKRLAAEVTKLVHGQEGLDSAKRCTQALY 369

Query: 328 DMSIHS------QHMPTI----SISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAI 377
             SI +      Q +  +    S S+  +  G  ++    KA          R +    +
Sbjct: 370 HSSIEALEVMSDQELKELFKEASFSELVLDPGTSVIDTCRKANAIPDGPRGYRMITEGGV 429

Query: 378 KINNSIISN-EKLQIKLQDFDSTGNIKLSFGKKNHII 413
            IN+  ++N E + +  Q     G   L  GK+N  I
Sbjct: 430 SINHRQVTNPESVLVIGQHILKNGLSLLKIGKRNFYI 466


>gi|237804411|ref|YP_002888565.1| tyrosyl-tRNA synthetase [Chlamydia trachomatis B/TZ1A828/OT]
 gi|231272711|emb|CAX09615.1| tyrosyl-tRNA synthetase [Chlamydia trachomatis B/TZ1A828/OT]
          Length = 412

 Score =  225 bits (573), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 130/369 (35%), Positives = 200/369 (54%), Gaps = 29/369 (7%)

Query: 36  VTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMR 95
           V+AY+G+D TA SLH GH   +  L  L   G  P++L+GG T +IGDPS +   R ++ 
Sbjct: 28  VSAYLGFDPTAPSLHIGHWIGICFLRRLAAYGITPVALVGGATGMIGDPSGKSVERSLLD 87

Query: 96  SQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLS 155
             ++ +N +KI    +S++          ++NN  WL S+  +D LR++G  F +  ML+
Sbjct: 88  QAQVLDNSKKIAAALASYL------PGIRIVNNADWLGSLSMVDFLRDVGKHFRLGSMLA 141

Query: 156 FESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER 215
            + V+ R+  E+ +S+ EF+Y++LQ+YDF  L K ++  LQ GGSDQWGNI  GID   R
Sbjct: 142 KDVVKQRVYSEEGISYTEFSYLLLQSYDFAHLFKEHNVVLQCGGSDQWGNITSGIDYIRR 201

Query: 216 LKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKR 275
               + + LT PLLT + G K+GKT SG IWL+  +T PY  +QY+  + D ++    + 
Sbjct: 202 RGLGQAYGLTYPLLTDSKGKKIGKTESGTIWLDPALTPPYELFQYFLRLPDQEISKVMRT 261

Query: 276 LTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQH 335
           LT L   EI  + +    +    KK IA  I   VHG E   + A AA E F  S     
Sbjct: 262 LTLLDNEEIFALDERLTSDPQAVKKYIAEVIVKDVHGSEGLAQ-AQAATESFFASKGK-- 318

Query: 336 MPTISISKDE----VSRGMGL------------LTLIVKAGFATSTNEARRHLKSNAIKI 379
               SI++ E    V  G+G+            L ++V+ GF +S  +ARR ++   + I
Sbjct: 319 ----SITEVELVALVESGVGVKVARADLIGKRWLDIVVELGFCSSRGQARRLIQQRGLYI 374

Query: 380 NNSIISNEK 388
           N   +++E+
Sbjct: 375 NQEPLADEQ 383


>gi|39938955|ref|NP_950721.1| tyrosyl-tRNA synthetase [Onion yellows phytoplasma OY-M]
 gi|81402377|sp|Q6YQA6|SYY_ONYPE RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|39722064|dbj|BAD04554.1| tyrosyl-tRNA synthetase [Onion yellows phytoplasma OY-M]
          Length = 413

 Score =  225 bits (573), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 141/418 (33%), Positives = 216/418 (51%), Gaps = 26/418 (6%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           F   L  R  I   SN  ++  L     V  Y G+D T+ SL  GHL Q+ ++  +Q+ G
Sbjct: 3   FYEELKWRNLIKDCSNETQVKELLDNNQVKFYCGFDPTSHSLTVGHLVQITMILLMQRQG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H P+ L+GG T +IGDP    E R+++  +   +N + I+    + +           +N
Sbjct: 63  HLPVILVGGATGLIGDPK-ETEERKLLSLENSLQNAKSIECQLKNILL----NKQVEFVN 117

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  I  I  LR  G  F++N MLS  +V  RL     +SF EF+YMILQ+ DF  L
Sbjct: 118 NYQWLSQIDIISFLRNYGKLFNINYMLSKHAVAKRL--ASGISFTEFSYMILQSLDFHHL 175

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERL-KTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
            KN+  RLQ+GGSDQWGNI  G++L  +L K      +++PLL  + GTK GK+  G +W
Sbjct: 176 YKNHKVRLQLGGSDQWGNITSGLELIRKLEKKSDALGISTPLLLNSDGTKFGKSEKGVLW 235

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIAT 304
           +N  MTSPY  +QY+ N+ D +V+++ K LT +P  EI  + K  L+  +   A+K +  
Sbjct: 236 VNPSMTSPYEIYQYFLNVSDKEVINYLKMLTLIPKQEILELEKNTLENPQQRLAQKALTQ 295

Query: 305 EITTMVHGREEAEKA--------ATAAMECF---DMSIHSQHMPTISISKDEVSRGMGLL 353
            I T++H  +  ++         + A  E F   D  +  + +   S  +D     + L+
Sbjct: 296 NIITLIHSSDILQECIKTNQILFSNAKKESFQEKDFILLQKTLFCHSTKED-----ILLV 350

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
             +V+   ATS +EAR  +K N IK+ N  I +    I  ++      + L  GKKN+
Sbjct: 351 DALVQTKLATSKSEAREFIKDNTIKLFNQKIKSLDFAITKKNTLFDKYVLLKKGKKNN 408


>gi|312194516|ref|YP_004014577.1| tyrosyl-tRNA synthetase [Frankia sp. EuI1c]
 gi|311225852|gb|ADP78707.1| tyrosyl-tRNA synthetase [Frankia sp. EuI1c]
          Length = 429

 Score =  225 bits (573), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 130/406 (32%), Positives = 212/406 (52%), Gaps = 15/406 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S  L  LS RG IH  ++  EL          AYIG+D TA  L  GH+  + LL    +
Sbjct: 3   SALLDELSWRGLIHDSTDAAELRNHLDSAARRAYIGFDPTAPGLTIGHMLPITLLIRAAR 62

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSS-FIKYGTGKTDAL 124
            G +P++L GGGT +IGDPS +   R+++  Q++  N+ + + +  + F +        +
Sbjct: 63  AGIRPVALFGGGTGLIGDPSGKSVERQLLSPQDVAANVSRHQELMRTIFARALPADQMPI 122

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK-REQSLSFLEFNYMILQAYD 183
            ++N  WL  +  I+ LR++G  F +  M   +SVR RL+  +  LS+ EF+YM+LQAYD
Sbjct: 123 FVDNSAWLGGLGLIEFLRDVGKHFPIGEMTKRDSVRRRLEDPDVGLSYTEFSYMLLQAYD 182

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F  L +++   +QMG SDQWGNI+ GID   R+   +   LT PLL  + GTK GK+  G
Sbjct: 183 FRRLCEDHGVTVQMGASDQWGNIVAGIDYIRRVLRTQAHGLTCPLLLRSDGTKFGKSEKG 242

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEA--KKI 301
           A+W++ + TSPY F+Q+  N  D +   FA   +      ++++     +  +    ++ 
Sbjct: 243 AVWISADGTSPYTFYQFVINQSDENARQFALFFSLADRESLEKLFAQHAETPSRRALQRY 302

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEV-SRGM 350
           +A E+TT+VHG E  + A  A+   F   + +            +P+I   +  +   G 
Sbjct: 303 LAREMTTLVHGEEATDAAEAASEALFKGDVRAISPQLFGDVFTDVPSIEEPRSRLDGDGW 362

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
            ++ L++  G A+S   AR HL + AI IN   +S+   ++   D 
Sbjct: 363 PVVDLLIAVGLASSKKVAREHLGNGAISINGDKVSDLDARVTAADL 408


>gi|125570522|gb|EAZ12037.1| hypothetical protein OsJ_01916 [Oryza sativa Japonica Group]
          Length = 545

 Score =  225 bits (573), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 143/424 (33%), Positives = 219/424 (51%), Gaps = 17/424 (4%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           +S+L ERG +   ++        S   + AY G+D TA SLH G+L  L++L W ++ GH
Sbjct: 122 VSVLRERGLVEATTSESLGSASASPRELKAYCGFDPTAESLHLGNLLGLVVLSWFRRCGH 181

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA--LML 126
             ++L+GG T  +G PS +   R  +    ++ N   IK +    +      ++    +L
Sbjct: 182 NAVALVGGATGRVGYPSGKSPERPELELAAVETNSNAIKSLIGQILDRAPEPSNIRNPIL 241

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           +N  W   I  +D L+E+G F  V  M++ ESV+ RL  E  +S+ EF Y +LQ YDF+ 
Sbjct: 242 DNYDWWKDITLLDFLKEVGRFARVGTMIAKESVKKRLMSEDGMSYTEFTYQLLQGYDFLY 301

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGER-LKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           + +N    +Q+GGSDQWGNI  G +L  + L+      LT PLL  + GTK GKT  GAI
Sbjct: 302 MFRNMGVNVQIGGSDQWGNITAGTELIRKILQVEGAHGLTFPLLLKSDGTKFGKTEDGAI 361

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKII 302
           WL+ +M SPY F+QY+ ++ D DV+ F K LT + + EI  +    K  G   N  ++ +
Sbjct: 362 WLSPKMLSPYKFYQYFFSVPDIDVIRFMKILTFMSLDEIQELEESMKKPGYVPNTIQRRL 421

Query: 303 ATEITTMVHGR---EEAEKAATAAMECFDMSIHSQ-------HMPTISISKDEVSRGMGL 352
           A E+T  VHG    EEA KA  A        + SQ        +P+  +   +V +   L
Sbjct: 422 AEEVTRFVHGEEGLEEALKATEALRPGAQTQLDSQTIEGIADDVPSCFLPYGQVLKSP-L 480

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           + L V  G   S +  RR +K   + +NN  I +E   ++  D      + LS GKKN +
Sbjct: 481 VDLAVSTGLLASKSAVRRLIKQGGLYLNNIRIDSEDKLVEEGDVVDGKVLLLSAGKKNKM 540

Query: 413 ICHL 416
           +  +
Sbjct: 541 VVRI 544



 Score = 44.3 bits (103), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 42/78 (53%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
            +   + +L ERG +   ++        S   + AY G+D TA SLH G+L  L++L W 
Sbjct: 45  IRRSVVEVLRERGLVEATTSESLGSASASPRELKAYCGFDPTAESLHLGNLLGLVVLSWF 104

Query: 64  QKTGHKPISLMGGGTSII 81
           ++ GH  ++L+GG T  +
Sbjct: 105 RRCGHNAVALVGGATRPV 122


>gi|293400557|ref|ZP_06644702.1| tyrosine--tRNA ligase [Erysipelotrichaceae bacterium 5_2_54FAA]
 gi|291305583|gb|EFE46827.1| tyrosine--tRNA ligase [Erysipelotrichaceae bacterium 5_2_54FAA]
          Length = 407

 Score =  224 bits (572), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 139/406 (34%), Positives = 214/406 (52%), Gaps = 18/406 (4%)

Query: 15  RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLM 74
           RG I   S+P+  ++L ++ V T YIG D T  SLH GH +  ++   L++ GH PI L+
Sbjct: 10  RGLIKDCSSPKIENMLNNEKV-TFYIGTDPTGDSLHIGHYSSFLISKRLKQAGHNPILLV 68

Query: 75  GGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCS 134
           GGGT +IGDP    E R M+   E+  N       F+   K         ++NN  W+  
Sbjct: 69  GGGTGLIGDPKPTAE-RAMISKDEVAHN-------FACLKKQAQDVFGFEVVNNYDWIKD 120

Query: 135 IKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCR 194
           I  +D LR+ G +F++N ML+ + V  RL  ++ +++ EF+YMILQA DF+ L +N +C 
Sbjct: 121 INTLDFLRDYGKYFNINYMLNKDIVARRL--DEGITYTEFSYMILQALDFMHLYENRNCI 178

Query: 195 LQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSP 254
           +Q+ G DQWGNI  GI+L  +    + +  T PL+T A GTK GK+   AIWL+K  TS 
Sbjct: 179 MQVAGQDQWGNITAGIELIRKKLGKEAYGFTMPLVTKADGTKFGKSEGKAIWLDKNKTSS 238

Query: 255 YNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN--EAKKIIATEITTMVHG 312
           Y  +Q+  N +D+ V+ + K LT L   EI+ + +    +    EA+K +A  +   +HG
Sbjct: 239 YELYQFLVNSEDSKVIEYLKTLTFLSREEIEDLEEKTKIDAGRREAQKALAKAVVIDLHG 298

Query: 313 REEAEKAATAAMECF-----DMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
            EE EKA       F     D++               V   M LL ++V+A  A+S  E
Sbjct: 299 EEEYEKALKITNAFFKGNIKDLTSDELEDALHGFDSIAVDDRMPLLDVLVQAKIASSKRE 358

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
           AR  +K  +I+IN   I + +  +      +T    +  GK+N+ +
Sbjct: 359 AREWIKQGSIQINGERIKDCEFIVSSTHAITTNKTIIKRGKRNYYV 404


>gi|149019700|gb|EDL77848.1| tyrosyl-tRNA synthetase 2 (mitochondrial) [Rattus norvegicus]
          Length = 478

 Score =  224 bits (571), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 131/397 (32%), Positives = 204/397 (51%), Gaps = 20/397 (5%)

Query: 37  TAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRS 96
           T Y G+D T  SLH GHL  L+ LF  Q+ GH  I+L+GG T+++GDPS R + R  + +
Sbjct: 76  TVYCGFDPTGDSLHVGHLLTLLGLFHFQRAGHNVIALVGGSTALLGDPSGRTKEREALSA 135

Query: 97  Q-------EIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFS 149
           +        +Q  +E +    +     G       +L+N  W      +D L  +G  F 
Sbjct: 136 ECVRANARALQRGLETLAANHARLFADGRPWGTFTVLDNAAWFQKQHLMDFLATVGGHFR 195

Query: 150 VNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICG 209
           +  +LS  SV+SRLK  + +S  EF Y +LQAYDF  L ++Y CR+Q+GGSDQ GNI+ G
Sbjct: 196 MGTLLSRLSVQSRLKSPEGMSLAEFFYQVLQAYDFYYLFRHYGCRVQLGGSDQLGNIMSG 255

Query: 210 IDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADV 269
            +   +L    +F +T PL+T+ +G K+GK+   A+WLN+E TSP+  +Q++    D  V
Sbjct: 256 YEFIHKLTGEDVFGITVPLITSTTGAKLGKSAGNAVWLNREKTSPFELYQFFIRQQDDSV 315

Query: 270 VSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATEITTMVHGREEAEKAATAAMECF 327
             + K  T LP+ EID + +L  KE  +  A+K +A E+T +VHG+E  + A       +
Sbjct: 316 ERYLKLFTFLPLPEIDHIMQLHVKEPEKRIAQKRLAAEVTKLVHGQEGLDSAKRCTQALY 375

Query: 328 DMSIHS------QHMPTI----SISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAI 377
             SI +      Q +  +    S S+  +  G  ++    KA          R +    +
Sbjct: 376 HSSIEALEVMSDQELKELFKEASFSELVLDPGTSVIDTCRKANAIPDGPRGYRMITEGGV 435

Query: 378 KINNSIISN-EKLQIKLQDFDSTGNIKLSFGKKNHII 413
            IN+  ++N E + +  Q     G   L  GK+N  I
Sbjct: 436 SINHRQVTNPESVLVIGQHILKNGLSLLKIGKRNFYI 472


>gi|57528201|ref|NP_001009627.1| tyrosyl-tRNA synthetase, mitochondrial precursor [Rattus
           norvegicus]
 gi|81883008|sp|Q5I0L3|SYYM_RAT RecName: Full=Tyrosyl-tRNA synthetase, mitochondrial; AltName:
           Full=Tyrosine--tRNA ligase; Short=TyrRS; Flags:
           Precursor
 gi|56972089|gb|AAH88224.1| Tyrosyl-tRNA synthetase 2 (mitochondrial) [Rattus norvegicus]
          Length = 471

 Score =  224 bits (570), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 131/397 (32%), Positives = 204/397 (51%), Gaps = 20/397 (5%)

Query: 37  TAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRS 96
           T Y G+D T  SLH GHL  L+ LF  Q+ GH  I+L+GG T+++GDPS R + R  + +
Sbjct: 69  TVYCGFDPTGDSLHVGHLLTLLGLFHFQRAGHNVIALVGGSTALLGDPSGRTKEREALSA 128

Query: 97  Q-------EIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFS 149
           +        +Q  +E +    +     G       +L+N  W      +D L  +G  F 
Sbjct: 129 ECVRANARALQRGLETLAANHARLFADGRPWGTFTVLDNAAWFQKQHLMDFLATVGGHFR 188

Query: 150 VNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICG 209
           +  +LS  SV+SRLK  + +S  EF Y +LQAYDF  L ++Y CR+Q+GGSDQ GNI+ G
Sbjct: 189 MGTLLSRLSVQSRLKSPEGMSLAEFFYQVLQAYDFYYLFRHYGCRVQLGGSDQLGNIMSG 248

Query: 210 IDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADV 269
            +   +L    +F +T PL+T+ +G K+GK+   A+WLN+E TSP+  +Q++    D  V
Sbjct: 249 YEFIHKLTGEDVFGITVPLITSTTGAKLGKSAGNAVWLNREKTSPFELYQFFIRQQDDSV 308

Query: 270 VSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATEITTMVHGREEAEKAATAAMECF 327
             + K  T LP+ EID + +L  KE  +  A+K +A E+T +VHG+E  + A       +
Sbjct: 309 ERYLKLFTFLPLPEIDHIMQLHVKEPEKRIAQKRLAAEVTKLVHGQEGLDSAKRCTQALY 368

Query: 328 DMSIHS------QHMPTI----SISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAI 377
             SI +      Q +  +    S S+  +  G  ++    KA          R +    +
Sbjct: 369 HSSIEALEVMSDQELKELFKEASFSELVLDPGTSVIDTCRKANAIPDGPRGYRMITEGGV 428

Query: 378 KINNSIISN-EKLQIKLQDFDSTGNIKLSFGKKNHII 413
            IN+  ++N E + +  Q     G   L  GK+N  I
Sbjct: 429 SINHRQVTNPESVLVIGQHILKNGLSLLKIGKRNFYI 465


>gi|254572493|ref|XP_002493356.1| Mitochondrial tyrosyl-tRNA synthetase [Pichia pastoris GS115]
 gi|238033154|emb|CAY71177.1| Mitochondrial tyrosyl-tRNA synthetase [Pichia pastoris GS115]
 gi|328352627|emb|CCA39025.1| tyrosyl-tRNA synthetase [Pichia pastoris CBS 7435]
          Length = 494

 Score =  224 bits (570), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 121/332 (36%), Positives = 183/332 (55%), Gaps = 24/332 (7%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L+ L +RG + Q ++  EL  LCS+  ++ Y G D +A SLH G+L  LM+L      GH
Sbjct: 48  LNHLKKRGLLSQCTHEPELSQLCSKRRLSLYCGADPSARSLHIGNLLPLMVLLHFNLRGH 107

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG--------- 119
               L+GG T  +GDPS R+  R  ++ +E + N+E I+    SF + G           
Sbjct: 108 NIFPLVGGATGKVGDPSGRETERTEIQHEERESNVENIRKQMKSFFRRGVTFAHRRNQLF 167

Query: 120 ----KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFN 175
                   ++ NN  W  +I+ +D L   G F  VN+ML+ ES++ RL     + F EF 
Sbjct: 168 KDVEPGTQMLKNNIEWWENIRILDFLSTYGKFIKVNQMLARESIKKRLNSGMGIGFNEFT 227

Query: 176 YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL---------KTPKLFALTS 226
           Y ILQA+DF  L KN++ ++Q+GG+DQ+GNI+ GID   RL           P  F +T 
Sbjct: 228 YQILQAFDFFVLYKNHNVQIQVGGNDQYGNIVAGIDFISRLHRNKADNAVHAPGAFGITV 287

Query: 227 PLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR 286
           PLLTT++G K GK+   A++++K MT  Y  +QY  N+ D DV  F  + + LP+S ID+
Sbjct: 288 PLLTTSTGEKFGKSAGNAVFIDKYMTPSYQLYQYMINLSDGDVERFLNKFSLLPLSVIDK 347

Query: 287 --MAKLQGKEINEAKKIIATEITTMVHGREEA 316
             +   Q K+    +KI+A E+  ++HG+ E 
Sbjct: 348 IVLKHKQNKKQRIGQKILAVELCDLIHGQGEG 379


>gi|329942783|ref|ZP_08291562.1| tyrosyl-tRNA synthetase [Chlamydophila psittaci Cal10]
 gi|332287375|ref|YP_004422276.1| tyrosyl-tRNA synthetase [Chlamydophila psittaci 6BC]
 gi|313847956|emb|CBY16952.1| tyrosyl-tRNA synthetase [Chlamydophila psittaci RD1]
 gi|325506984|gb|ADZ18622.1| tyrosyl-tRNA synthetase [Chlamydophila psittaci 6BC]
 gi|328815043|gb|EGF85032.1| tyrosyl-tRNA synthetase [Chlamydophila psittaci Cal10]
          Length = 412

 Score =  224 bits (570), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 137/424 (32%), Positives = 219/424 (51%), Gaps = 29/424 (6%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           DF+  L +RG +   S+   LD + +   V+AY+G+D TA SLH GH   +  L  +   
Sbjct: 3   DFIQHLQDRGILENFSSG--LDSVSTP--VSAYLGFDPTAPSLHIGHWIGICFLRRMASF 58

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           G  P++L+G  T +IGDPS +   R ++   ++  N +K+    S ++          ++
Sbjct: 59  GITPVALVGSATGMIGDPSGKSIERTLLEESQVAYNSQKLSECLSRYLP------GLQIV 112

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL     ID LR++G  F +  ML  ++V+ R++ E+ +S+ EF+YM+LQ+YDF  
Sbjct: 113 NNMDWLKETTVIDFLRDVGKHFRLGAMLGKDTVKQRVQSEEGISYTEFSYMLLQSYDFAY 172

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + +   LQ GGSDQWGNI  GID   RL   + + LT PLLT + G K+GKT SG IW
Sbjct: 173 LFEKHGVCLQCGGSDQWGNITSGIDYIRRLGLGQAYGLTYPLLTNSQGKKIGKTESGTIW 232

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           L+ ++TS Y  +QY+  + D +V   A+ LT L   EI  + +    +    KK +A  I
Sbjct: 233 LDPKLTSAYELYQYFLRLPDQEVPKVARTLTLLSNEEIFDLDQKFLLDPVAVKKFVAETI 292

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISIS--KDEVSRGMGL------------ 352
            T +HG +   +A     +    S+H   + ++S    +D ++ G G+            
Sbjct: 293 VTSIHGEDGLREA-----QIVTQSMHPGKVSSVSEKDFQDLIAMGQGVSLERAQALGKRW 347

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           + L V  G  +S  EARR ++   + +N+  I NE    +         + L+ GKK  +
Sbjct: 348 IDLFVTLGVCSSKGEARRLIEQKGLYVNSEPIENEHSVCEETQVCFDQYVLLAQGKKKKL 407

Query: 413 ICHL 416
           +  L
Sbjct: 408 VLRL 411


>gi|149713907|ref|XP_001503258.1| PREDICTED: similar to LOC536956 protein [Equus caballus]
          Length = 478

 Score =  223 bits (569), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 130/397 (32%), Positives = 206/397 (51%), Gaps = 20/397 (5%)

Query: 37  TAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRS 96
           T Y G+D TA SLH GHL  L+ LF  Q+ GH  I+L+GG T+ +GDPS R + R  + +
Sbjct: 76  TIYCGFDPTADSLHVGHLLTLLGLFHFQRAGHNVIALVGGATARLGDPSGRTKEREALDA 135

Query: 97  QEIQENIEKIKGIFSSFIK-----YGTGKT--DALMLNNETWLCSIKYIDLLREIGSFFS 149
           + +Q N   ++    +        +  G+T     +L+N +W      +D L  +G  F 
Sbjct: 136 ERVQSNARALRRELETLAAHHQQLFTNGRTWGSFTVLDNSSWYQQQHLVDFLAAVGGHFR 195

Query: 150 VNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICG 209
           +  +LS +SV++RLK  + +S  EF Y +LQAYDF  L + Y CR+Q+GGSDQ GNI+ G
Sbjct: 196 MGTLLSRQSVQTRLKSPEGMSLAEFLYQVLQAYDFYYLFQRYGCRVQLGGSDQLGNIMSG 255

Query: 210 IDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADV 269
            +   +L    +F +T PL+T+ +G K+GK+   A+WLN++ TSP+  +Q++    D  V
Sbjct: 256 YEFIHKLTGEDVFGITVPLITSTTGAKLGKSAGNAVWLNRDKTSPFELYQFFVRQQDDSV 315

Query: 270 VSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATEITTMVHGREEAEKAATAAMECF 327
             + K  T LP+ EID + +   KE  +   +K +A E+T +VHG+E  + A       +
Sbjct: 316 ERYLKLFTFLPLPEIDHIMQQHVKEPEKWGPQKRLAAEVTKLVHGQEGLDSAKRCTQALY 375

Query: 328 DMSIHS------QHMPTI----SISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAI 377
             SI +      Q +  +    S S+  +  G  +L    KA          R +    +
Sbjct: 376 HSSIDALEVMSDQELKELFKEASFSELVLDPGTSVLDTCRKANAIPDGPRGYRMITEGGV 435

Query: 378 KINNSIISN-EKLQIKLQDFDSTGNIKLSFGKKNHII 413
            IN+  ++N E + +  Q     G   L  GK+N  I
Sbjct: 436 SINHRQVTNPESVLVVGQHILKNGLSLLKIGKRNFYI 472


>gi|57106869|ref|XP_543740.1| PREDICTED: similar to Probable tyrosyl-tRNA synthetase,
           mitochondrial precursor (Tyrosine--tRNA ligase) (TyrRS)
           [Canis familiaris]
          Length = 477

 Score =  223 bits (568), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 136/426 (31%), Positives = 211/426 (49%), Gaps = 22/426 (5%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           F     E+G   ++  P  LD        T Y G+D TA SLH GHL  L+ LF  Q+ G
Sbjct: 48  FKEFFPEKG--TKVELPELLDRGSGSFPQTVYCGFDPTADSLHVGHLLTLLGLFHFQRAG 105

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN-------IEKIKGIFSSFIKYGTGK 120
           H  I+L+GG T+ +GDPS R + R  +  ++++ N       +E +          G   
Sbjct: 106 HNVIALVGGATARLGDPSGRPKEREALAPEQVRGNARALRRGLEAVAANHQRLFANGRPW 165

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +L+N  W      +D L  +G  F +  +LS  SV++RL+    +S  EF Y +LQ
Sbjct: 166 GSFTVLDNAAWYQGQHLVDFLAAVGGHFRMGTLLSRASVQARLQSAGGMSLAEFLYQVLQ 225

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDF  L ++Y CR+Q+GGSDQ GNI  G +   +L    +F +T PL+T+ +G K+GK+
Sbjct: 226 AYDFYYLFQHYGCRVQLGGSDQLGNITSGYEFIHKLTGEDVFGITVPLVTSTTGAKLGKS 285

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--A 298
              A+WLN+E TSP+  +Q++    D  V  + K  T LP+ EID + +L  KE  +   
Sbjct: 286 AGNAVWLNREKTSPFELYQFFVRQQDNLVERYLKLFTFLPLPEIDHIMQLHDKEPEKRGP 345

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTI----SISKDEVSR 348
           +K +A E+T +VHG+E  + A       +  SI +      Q +  +    S S+  +  
Sbjct: 346 QKRLAAEVTKLVHGQEGLDSAKRCTQALYHSSIDALEVMSDQELKELFKEASFSELVLDP 405

Query: 349 GMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISN-EKLQIKLQDFDSTGNIKLSFG 407
           G  +L +  KA          R +    + IN+  ++N E + +  Q     G   L  G
Sbjct: 406 GTSVLDICRKANAIPDGPRGYRMITEGGVSINHRQVTNPESVLVVGQHILKNGLSLLKIG 465

Query: 408 KKNHII 413
           K+N  I
Sbjct: 466 KRNFYI 471


>gi|328914623|gb|AEB55456.1| tyrosyl-tRNA synthetase [Chlamydophila psittaci 6BC]
          Length = 433

 Score =  223 bits (568), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 137/424 (32%), Positives = 219/424 (51%), Gaps = 29/424 (6%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           DF+  L +RG +   S+   LD + +   V+AY+G+D TA SLH GH   +  L  +   
Sbjct: 24  DFIQHLQDRGILENFSSG--LDSVSTP--VSAYLGFDPTAPSLHIGHWIGICFLRRMASF 79

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           G  P++L+G  T +IGDPS +   R ++   ++  N +K+    S ++          ++
Sbjct: 80  GITPVALVGSATGMIGDPSGKSIERTLLEESQVAYNSQKLSECLSRYLP------GLQIV 133

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL     ID LR++G  F +  ML  ++V+ R++ E+ +S+ EF+YM+LQ+YDF  
Sbjct: 134 NNMDWLKETTVIDFLRDVGKHFRLGAMLGKDTVKQRVQSEEGISYTEFSYMLLQSYDFAY 193

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + +   LQ GGSDQWGNI  GID   RL   + + LT PLLT + G K+GKT SG IW
Sbjct: 194 LFEKHGVCLQCGGSDQWGNITSGIDYIRRLGLGQAYGLTYPLLTNSQGKKIGKTESGTIW 253

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           L+ ++TS Y  +QY+  + D +V   A+ LT L   EI  + +    +    KK +A  I
Sbjct: 254 LDPKLTSAYELYQYFLRLPDQEVPKVARTLTLLSNEEIFDLDQKFLLDPVAVKKFVAETI 313

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISIS--KDEVSRGMGL------------ 352
            T +HG +   +A     +    S+H   + ++S    +D ++ G G+            
Sbjct: 314 VTSIHGEDGLREA-----QIVTQSMHPGKVSSVSEKDFQDLIAMGQGVSLERAQALGKRW 368

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           + L V  G  +S  EARR ++   + +N+  I NE    +         + L+ GKK  +
Sbjct: 369 IDLFVTLGVCSSKGEARRLIEQKGLYVNSEPIENEHSVCEETQVCFDQYVLLAQGKKKKL 428

Query: 413 ICHL 416
           +  L
Sbjct: 429 VLRL 432


>gi|256851956|ref|ZP_05557343.1| tyrosyl-tRNA synthetase [Lactobacillus jensenii 27-2-CHN]
 gi|260661474|ref|ZP_05862387.1| tyrosyl-tRNA synthetase [Lactobacillus jensenii 115-3-CHN]
 gi|282931937|ref|ZP_06337404.1| tyrosine--tRNA ligase [Lactobacillus jensenii 208-1]
 gi|256615368|gb|EEU20558.1| tyrosyl-tRNA synthetase [Lactobacillus jensenii 27-2-CHN]
 gi|260547929|gb|EEX23906.1| tyrosyl-tRNA synthetase [Lactobacillus jensenii 115-3-CHN]
 gi|281303938|gb|EFA96073.1| tyrosine--tRNA ligase [Lactobacillus jensenii 208-1]
          Length = 420

 Score =  223 bits (568), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 143/402 (35%), Positives = 209/402 (51%), Gaps = 25/402 (6%)

Query: 5   KSDFLSILSERGFIHQISNPRELD-ILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           K D L  L  RG I+Q ++   L   L     +  Y G D T  SLH GHL   M+L   
Sbjct: 3   KFDILEDLKWRGAINQQTDEEGLKKYLAEHDDLALYCGTDPTGDSLHIGHLIPFMILKRF 62

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN----IEKIKGIFSSFIKYGTG 119
           Q  G+ P+ ++GGGT  IGDPS R   R +   +++  N      ++K +F        G
Sbjct: 63  QLAGYHPVIIIGGGTGSIGDPSGRKTERVLQSDEQVHHNEVALTNQMKKLF--------G 114

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
             +  ++NN  WL  +  ++ LR+ G  F +N ML+ + V SRL  E  +SF EF Y IL
Sbjct: 115 TENFQIVNNRDWLGKMSLLEFLRDYGKLFQINNMLAKDVVASRL--ENGISFTEFTYQIL 172

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK--LFALTSPLLTTASGTKM 237
           Q  DF  L ++Y  ++Q+GGSDQWGNI  GIDL  RL+  +   F LT PL+  A GTK 
Sbjct: 173 QGIDFYILNRDYGVQMQIGGSDQWGNITSGIDLIHRLEGNERPAFGLTIPLMLKADGTKF 232

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI-- 295
           GK+  GA+WL+ E TSPY F+Q+W N DD DVV + K  T L   EID +A+    E   
Sbjct: 233 GKSAGGAVWLDPEKTSPYEFYQFWINQDDRDVVKYLKYFTFLSHEEIDALAEKVKNEPWK 292

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI------SISKDEVSRG 349
            EA+K +A E+T  VHG    E+A       F  ++    +  I      + S +  +  
Sbjct: 293 REAQKTLAAEVTKFVHGEAGLEEAQMITDALFSGNVKELSVKQIEQALKNAPSAESSNEK 352

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
             L+  +V     +S  +AR  +++ AI +N + +   + ++
Sbjct: 353 KNLVDFLVDTKIESSKRQAREDIQNGAIYVNGNKVQELEFEV 394


>gi|119115583|ref|XP_311148.3| tyrosyl-tRNA synthetase (AGAP000012-PA) [Anopheles gambiae str.
           PEST]
 gi|116130907|gb|EAA06615.3| tyrosyl-tRNA synthetase (AGAP000012-PA) [Anopheles gambiae str.
           PEST]
          Length = 463

 Score =  223 bits (567), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 138/428 (32%), Positives = 226/428 (52%), Gaps = 26/428 (6%)

Query: 12  LSERGFIHQISNPRELDILCS---QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L +RGFI  +     +D   S       T Y G+D TA+SLH G+L  L+ L   Q+ GH
Sbjct: 33  LRDRGFIQDVFPAETIDKASSMLGSTCQTVYAGFDPTANSLHVGNLLVLIGLLHTQRAGH 92

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI----EKIKGIFSS----FIKYGTGK 120
           +PI+L+GG T +IGDPS R   R+ + ++ ++ N+     +I+ IF++    F    +  
Sbjct: 93  QPIALVGGATGLIGDPSGRKTERQQLETEAVEHNVTCIRRQIETIFANHERFFWDRPSSL 152

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
              L++NN  W     ++D +  +G  F +  MLS  SV++RL  E  +SF EF+Y + Q
Sbjct: 153 KPVLVVNNADWYRQYSFVDFMANVGRHFRMGAMLSRSSVQTRLTSESGMSFTEFSYQLFQ 212

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYD++ L + ++CR Q+GGSDQ GNI+ G +L  R    ++F LT PL+T   G K GK+
Sbjct: 213 AYDWLHLLRQHNCRFQLGGSDQMGNIMSGQELISRTDGKEVFGLTLPLVTNEEGDKFGKS 272

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR-MAK-LQGKEINEA 298
              A+WL+ + TSPY  +Q++    D++V    + LT LP+  I++ MA+  +  E+ EA
Sbjct: 273 AGNAVWLSDDRTSPYAMYQFFVRTPDSEVEKLLRLLTFLPVQTIEQAMARHRRTPELWEA 332

Query: 299 KKIIATEITTMVHGREEAEKAAT----------AAMECFDMSIHSQHMPTISISKDEVSR 348
           +K++A E+T +VHG     KA            + +E  ++   +Q      + +     
Sbjct: 333 QKLLAGELTKLVHGEAGLYKAMAISRALYNGDLSTLEQLEVRDVAQSFGGAPLCEILPEP 392

Query: 349 GMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISN--EKLQIKLQDFDSTGNIKLSF 406
           GM +L + ++A    S  +A R + +    IN     N  E L   +    +  ++ L  
Sbjct: 393 GMTVLDVALRARCFPSRADAERIIGAGGFSINLKKAKNPAEVLSPSVHILSNRISL-LRV 451

Query: 407 GKKNHIIC 414
           GK+N+ I 
Sbjct: 452 GKRNYYIV 459


>gi|297205173|ref|ZP_06922569.1| tyrosine--tRNA ligase [Lactobacillus jensenii JV-V16]
 gi|297149751|gb|EFH30048.1| tyrosine--tRNA ligase [Lactobacillus jensenii JV-V16]
          Length = 424

 Score =  223 bits (567), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 143/402 (35%), Positives = 209/402 (51%), Gaps = 25/402 (6%)

Query: 5   KSDFLSILSERGFIHQISNPRELD-ILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           K D L  L  RG I+Q ++   L   L     +  Y G D T  SLH GHL   M+L   
Sbjct: 7   KFDILEDLKWRGAINQQTDEEGLKKYLAEHDDLALYCGTDPTGDSLHIGHLIPFMILKRF 66

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN----IEKIKGIFSSFIKYGTG 119
           Q  G+ P+ ++GGGT  IGDPS R   R +   +++  N      ++K +F        G
Sbjct: 67  QLAGYHPVIIIGGGTGSIGDPSGRKTERVLQSDEQVHHNEVALTNQMKKLF--------G 118

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
             +  ++NN  WL  +  ++ LR+ G  F +N ML+ + V SRL  E  +SF EF Y IL
Sbjct: 119 TENFQIVNNRDWLGKMSLLEFLRDYGKLFQINNMLAKDVVASRL--ENGISFTEFTYQIL 176

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK--LFALTSPLLTTASGTKM 237
           Q  DF  L ++Y  ++Q+GGSDQWGNI  GIDL  RL+  +   F LT PL+  A GTK 
Sbjct: 177 QGIDFYILNRDYGVQMQIGGSDQWGNITSGIDLIHRLEGNERPAFGLTIPLMLKADGTKF 236

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI-- 295
           GK+  GA+WL+ E TSPY F+Q+W N DD DVV + K  T L   EID +A+    E   
Sbjct: 237 GKSAGGAVWLDPEKTSPYEFYQFWINQDDRDVVKYLKYFTFLSHEEIDALAEKVKNEPWK 296

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI------SISKDEVSRG 349
            EA+K +A E+T  VHG    E+A       F  ++    +  I      + S +  +  
Sbjct: 297 REAQKTLAAEVTKFVHGEAGLEEAQMITDALFSGNVKELSVKQIEQALKNAPSAESSNEK 356

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
             L+  +V     +S  +AR  +++ AI +N + +   + ++
Sbjct: 357 KNLVDFLVDTKIESSKRQAREDIQNGAIYVNGNKVQELEFEV 398


>gi|328948364|ref|YP_004365701.1| Tyrosyl-tRNA synthetase [Treponema succinifaciens DSM 2489]
 gi|328448688|gb|AEB14404.1| Tyrosyl-tRNA synthetase [Treponema succinifaciens DSM 2489]
          Length = 410

 Score =  222 bits (565), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 145/419 (34%), Positives = 218/419 (52%), Gaps = 26/419 (6%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           F   L  RG +  ++     D L ++ + T Y G D TA SLH GH + L+    L + G
Sbjct: 3   FFEELQWRGLVKDVAGEDIADKLNNEKI-TFYWGTDPTADSLHLGHYSSLVTAKRLARAG 61

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H PI L+GG T +IGDP  R  + R + S E  E  + + GI S   +   GK  A ++N
Sbjct: 62  HHPILLVGGSTGLIGDP--RPTAEREIISHETLE--KNLAGIKSQVDRIFEGK--AEIVN 115

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W     +++ LR+IG + +VN MLS E +  RL  +  ++F EF+Y +LQ YDF+ L
Sbjct: 116 NYDWTKDYTFLEFLRDIGKYINVNYMLSKEIISRRL--DTGITFAEFSYTLLQGYDFLWL 173

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            +N +C LQ  G+DQWGNI  G++L  +++  + +  T PL+    G K GK+   A+WL
Sbjct: 174 YRNKNCILQAEGADQWGNITTGLELIRKIEGKEAYGFTMPLVLDKYGNKFGKSAGNALWL 233

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKKIIATE 305
           +   TS Y  +QY  N+DD+ VV + K  T L   +I+ +     +  E+ EA K +A E
Sbjct: 234 DLNKTSSYELYQYLVNVDDSMVVDYLKIFTFLSKEQIEELEAKNKEHPELREAHKALARE 293

Query: 306 ITTMVHGREEAEKAATAAMECF----------DMSIHSQHMPTISISKDEVSRGMGLLTL 355
           I T +HG  E  KA   +   F          D+ I  + +PTISIS+     G  L+ +
Sbjct: 294 IITDLHGAAEFVKAVNISSSLFSGDVKSLSLKDIEIGFKDVPTISISE-----GEKLIDV 348

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +V    A+S  EAR  L + +I +N    ++E + +  Q       I L  GKK + I 
Sbjct: 349 LVNNKIASSKREAREFLAAGSITLNGEKFTDENMPVTSQLAIEGKVIVLRRGKKKNYIV 407


>gi|66815010|ref|XP_641614.1| tyrosine-tRNA ligase [Dictyostelium discoideum AX4]
 gi|74897218|sp|Q54WD9|SYYM_DICDI RecName: Full=Probable tyrosyl-tRNA synthetase, mitochondrial;
           AltName: Full=Tyrosine--tRNA ligase; Short=TyrRS; Flags:
           Precursor
 gi|60469643|gb|EAL67632.1| tyrosine-tRNA ligase [Dictyostelium discoideum AX4]
          Length = 482

 Score =  222 bits (565), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 140/445 (31%), Positives = 232/445 (52%), Gaps = 46/445 (10%)

Query: 5   KSDFLSILSERGFIHQIS-NPRELDILCSQGV--------------VTAYIGYDLTASSL 49
           K++ ++IL +RGFIHQ++ +  E+  + S                 V+ Y G+D TA SL
Sbjct: 36  KNNVINILKKRGFIHQMTASDIEMIKMTSTNNNNNNDNNNNNNNNKVSLYAGFDPTADSL 95

Query: 50  HAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGI 109
           H G+L  LM++   ++ GH PI+LMGG T++IGDPS +   R M+  + I+ N++ I+  
Sbjct: 96  HIGNLLTLMVMLHFKRHGHNPIALMGGATALIGDPSGKSSDRVMLTEEFIEGNLKHIREN 155

Query: 110 FSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK--REQ 167
            ++ +       D L++NN  W  ++  I  LRE+GS+F V  M+  + +++RL    E 
Sbjct: 156 ITAVLG-----EDTLVVNNIEWNKTMDVISFLREVGSYFRVGSMIKKDFIQNRLSDSNEN 210

Query: 168 SLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSP 227
            +SF EF Y + QA DF  L   + C +Q+GGSDQWGNI  G DL  +        +T P
Sbjct: 211 GISFTEFCYSLFQANDFAHLFLKHGCSIQIGGSDQWGNITAGCDLIRKKLKGNAQGITIP 270

Query: 228 LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM 287
           LLT ++G K+GK+   +IWL+   TSPY F+QYW  + D DV    K  T +P+ EI  +
Sbjct: 271 LLTNSAGKKLGKSEGNSIWLSPHRTSPYKFYQYWIQVSDEDVERLLKLFTLIPLEEISIL 330

Query: 288 AKL--QGKEINEAKKIIATEITTMVHGREEAEK-------------------AATAAMEC 326
            +   +   +   +K IA  +T ++HG++  E+                   A+T  +  
Sbjct: 331 VQKHNENPHLRLGQKTIAEHVTRLIHGQKGVEEALNTTELLFGESNKLLTPNASTTKIGD 390

Query: 327 FDMSIHSQHMPTISISKDEV--SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSII 384
           FD+      +  I + + +   ++   +L L  +   A S ++ ++ L+S +I +NN  +
Sbjct: 391 FDIGYLLSRVNFIELERSKFVDNQTEPILNLFAQISDA-SKSKVKQLLQSKSIYLNNIPV 449

Query: 385 SNEKLQIKLQDFDSTGNIKLSFGKK 409
           ++    I+  D  +   I L  GKK
Sbjct: 450 ASNSQFIQSSDLIANDFIYLKSGKK 474


>gi|89898384|ref|YP_515494.1| tyrosyl-tRNA synthetase [Chlamydophila felis Fe/C-56]
 gi|89331756|dbj|BAE81349.1| tyrosyl tRNA synthetase [Chlamydophila felis Fe/C-56]
          Length = 427

 Score =  221 bits (564), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 134/424 (31%), Positives = 216/424 (50%), Gaps = 29/424 (6%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           DF+  L +RG +   S+   LD + S   V+AYIG+D TA SLH GH   +  L  +   
Sbjct: 18  DFIKYLKDRGILEDFSS--GLDNVISP--VSAYIGFDPTAPSLHIGHWLGICFLRRMATF 73

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           G  P++L+G  T +IGDPS +   R ++   ++  N +K+    S ++       +  ++
Sbjct: 74  GVTPMALVGSATGMIGDPSGKSVERSLLERNQVAYNSQKLSECLSHYLP------EVQIV 127

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W      ID LR++G  F +  MLS ++++ R++ E+ +S+ EF+Y++LQ+YDF  
Sbjct: 128 NNLDWFKDTTVIDFLRDVGKHFRLGTMLSKDTIKQRIQSEEGISYTEFSYILLQSYDFAH 187

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + +   LQ GGSDQWGNI  GID   R    + + LT PLLT + G K+GKT +G IW
Sbjct: 188 LFEKHGVSLQCGGSDQWGNITSGIDYIRRRGLGQAYGLTYPLLTNSQGKKIGKTETGTIW 247

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           L+  +TSPY  +QY+  + D +    A+ LT L   EI  + +    +    K+ +A  I
Sbjct: 248 LDPNLTSPYELYQYFLRLPDQETPKIARMLTLLSNEEIFDLDQKFLLDPIAVKRFVAETI 307

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISIS--KDEVSRGMGL------------ 352
              +HG    ++A          S+H   +  IS    +D +S G G+            
Sbjct: 308 VASIHGEGGLQEALAVT-----QSMHPGRVSFISEKDFQDLISMGQGVSLERSQTIGKRW 362

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           + L V  G   S  EARR +K   + +N+  +++E+   +         + L+ GKK  +
Sbjct: 363 VDLFVDVGVCGSKGEARRLVKQKGLYVNSDPVADEQSVFEEAQICFDQYVLLAQGKKKKL 422

Query: 413 ICHL 416
           +  L
Sbjct: 423 VLRL 426


>gi|238855572|ref|ZP_04645874.1| tyrosine--tRNA ligase [Lactobacillus jensenii 269-3]
 gi|260664764|ref|ZP_05865615.1| tyrosyl-tRNA synthetase [Lactobacillus jensenii SJ-7A-US]
 gi|282932742|ref|ZP_06338150.1| tyrosine--tRNA ligase [Lactobacillus jensenii 208-1]
 gi|313472673|ref|ZP_07813162.1| tyrosine--tRNA ligase [Lactobacillus jensenii 1153]
 gi|238831789|gb|EEQ24124.1| tyrosine--tRNA ligase [Lactobacillus jensenii 269-3]
 gi|239529365|gb|EEQ68366.1| tyrosine--tRNA ligase [Lactobacillus jensenii 1153]
 gi|260561247|gb|EEX27220.1| tyrosyl-tRNA synthetase [Lactobacillus jensenii SJ-7A-US]
 gi|281303152|gb|EFA95346.1| tyrosine--tRNA ligase [Lactobacillus jensenii 208-1]
          Length = 420

 Score =  221 bits (562), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 142/402 (35%), Positives = 208/402 (51%), Gaps = 25/402 (6%)

Query: 5   KSDFLSILSERGFIHQISNPRELD-ILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           K D L  L  RG I+Q ++   L   L     +  Y G D T  SLH GHL   M+L   
Sbjct: 3   KFDILEDLKWRGAINQQTDEEGLKKYLAEHDDLALYCGTDPTGDSLHIGHLIPFMILKRF 62

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN----IEKIKGIFSSFIKYGTG 119
           Q  G+ P+ ++GGGT  IGDPS R   R +   +++  N      ++K +F        G
Sbjct: 63  QLAGYHPVIIIGGGTGSIGDPSGRKTERVLQSDEQVHHNEVALTNQMKKLF--------G 114

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
             +  ++NN  WL  +  ++ LR+ G  F +N ML+ + V SRL  E  +SF EF Y IL
Sbjct: 115 TENFQIVNNRDWLGKMSLLEFLRDYGKLFQINNMLAKDVVASRL--ENGISFTEFTYQIL 172

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK--TPKLFALTSPLLTTASGTKM 237
           Q  DF  L ++Y  ++Q+GGSDQWGNI  GIDL  RL+      F LT PL+  A GTK 
Sbjct: 173 QGIDFYILNRDYGVQMQIGGSDQWGNITSGIDLIHRLEGNDRPAFGLTIPLMLKADGTKF 232

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI-- 295
           GK+  GA+WL+ E TSPY F+Q+W N DD DVV + K  T L   EI+ +A+    E   
Sbjct: 233 GKSAGGAVWLDPEKTSPYEFYQFWINQDDRDVVKYLKYFTFLSHEEIEALAEKVKTEPWK 292

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI------SISKDEVSRG 349
            EA+K +A E+T  VHG    ++A       F  ++    +  I      + S +  +  
Sbjct: 293 REAQKTLAAEVTKFVHGEAGLKEAQMITDALFSGNVKDLSVKQIEQALKNAPSAESTNEK 352

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
             L+  +V     +S  +AR  +++ AI +N   I + + ++
Sbjct: 353 QNLVEFLVDTKIESSKRQAREDIQNGAIYVNGDKIQDLEFEV 394


>gi|50310061|ref|XP_455044.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49644179|emb|CAH00131.1| KLLA0E24267p [Kluyveromyces lactis]
          Length = 453

 Score =  221 bits (562), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 130/337 (38%), Positives = 185/337 (54%), Gaps = 20/337 (5%)

Query: 3   AFKSDFLSILSERGFIHQISNPREL--DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           A K D L +L ERG + Q+S P +L  + L +   +  Y G D TA SLH G+L  LM+L
Sbjct: 12  ATKCDVLQVLRERGLVQQVSQPEKLLSEKLSNGDKIKLYCGADPTAKSLHLGNLLPLMVL 71

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKI----KGIFSSFIKY 116
                 GH  +SL+GG T  +GDPS R   R ++   + Q NIE+I    K  F++ +KY
Sbjct: 72  LNFYVRGHDVVSLIGGATGKVGDPSGRKTERDVIAEAKRQGNIERIVEQYKTFFTNGLKY 131

Query: 117 GTGKT---DA----LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSL 169
              +    DA      LNN +W   +K +D L   G    +  MLS +SV SRL+ +  +
Sbjct: 132 YESRIKERDAPGKVTYLNNISWWQDVKMLDFLATYGKHIRIQNMLSRDSVSSRLQSQDGI 191

Query: 170 SFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL-----KTPKLFAL 224
            F EF Y ILQAYDF  L  N    +Q+GG+DQWGNI  GIDL  R+     KT   F L
Sbjct: 192 GFNEFTYQILQAYDFYHLYSNEQVSIQVGGNDQWGNITAGIDLINRISPQHVKTRPAFGL 251

Query: 225 TSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI 284
           T PLLTT++G K GK+   A++++ E+ + Y+ +Q++ N  DADV    K  T LP+  I
Sbjct: 252 TVPLLTTSTGEKFGKSAGNAVFIDPEINTSYDMYQFFVNTTDADVAKQLKIFTLLPLELI 311

Query: 285 DRMAKLQGKEINE--AKKIIATEITTMVHGREEAEKA 319
           + +        NE  A+K +A E+  ++HG  + + A
Sbjct: 312 EDIMAQHALSPNERYAQKRLAKEVVDLIHGIGKGDDA 348


>gi|262340852|ref|YP_003283707.1| tyrosine-tRNA ligase [Blattabacterium sp. (Blattella germanica)
           str. Bge]
 gi|262272189|gb|ACY40097.1| tyrosine-tRNA ligase [Blattabacterium sp. (Blattella germanica)
           str. Bge]
          Length = 361

 Score =  221 bits (562), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 120/333 (36%), Positives = 196/333 (58%), Gaps = 21/333 (6%)

Query: 36  VTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMR 95
           +T YIG+D T+ SLH G L  L++L   QK GHK + L+GG T  IGDPS ++ SR ++ 
Sbjct: 30  ITMYIGFDPTSDSLHLGSLLPLIILIHFQKMGHKSLVLIGGATGFIGDPSGKENSRILLD 89

Query: 96  SQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLS 155
            + +Q+N E IK      +K  + +T+  +LNN  W+ ++ +++ +R+IG +F+VN M+S
Sbjct: 90  KEILQKNTESIKNQILKLLKVHSEETE--LLNNLDWIQNVSFLEFIRDIGKYFTVNHMIS 147

Query: 156 FESVRSRLK-REQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
            +SV+ R+  ++  +SF EF+Y ++Q YDF+ L +  +C LQ+GGSDQWGNI  GI+L  
Sbjct: 148 KDSVKKRINDKKNGISFTEFSYSLIQGYDFLYLNQMRNCLLQIGGSDQWGNITTGIELIR 207

Query: 215 RLKTPKLFALTSPLLTTASGTKMGKTLSGA-IWLNKEMTSPYNFWQYWRNIDDADVVSFA 273
           +    K++  T PL+T  +G K GK+     IWL+K  T+PY F+Q+W NI D ++  + 
Sbjct: 208 KKTGKKVYGFTFPLITKPNGIKFGKSEKEENIWLDKSKTTPYKFYQFWINISDFEIEKYV 267

Query: 274 KRLTTLPMSEIDRMAKLQGKEINE--AKKIIATEITTMVHGREEAEKAATAAMECFD--- 328
           K  T L   +ID++     K  ++   +K +A E+T  VHG   +E+        F    
Sbjct: 268 KIYTFLSKEKIDQLIIQHKKNPSQRFLQKKLAYEMTKWVHGNLISEEIMKITNVLFHNKN 327

Query: 329 -----------MSIHSQHMPTISISKDEVSRGM 350
                      +SI++ H+P + +S +E  +G+
Sbjct: 328 ETLQLLNEETLISIYN-HIPHMILSFEEFQKGI 359


>gi|221139710|ref|NP_001137392.1| tyrosyl-tRNA synthetase, mitochondrial [Danio rerio]
 gi|326679969|ref|XP_003201421.1| PREDICTED: tyrosyl-tRNA synthetase, mitochondrial-like [Danio
           rerio]
          Length = 474

 Score =  220 bits (561), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 138/419 (32%), Positives = 219/419 (52%), Gaps = 28/419 (6%)

Query: 20  QISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTS 79
           +++   E+  L   G  + Y G+D TA SLHAG+L  ++ L   +  GH  I+L+GG T+
Sbjct: 54  EVAAQAEIPDLLRSGPQSIYCGFDPTADSLHAGNLLAIIGLLHFRSAGHHIIALLGGATA 113

Query: 80  IIGDPSFRDESRRMMRSQEIQEN----IEKIKGIFSSFIKYGTGKTDAL----MLNNETW 131
            IGDPS R   R  +    +QEN    +E +  IF+    Y    +  L    +LNN +W
Sbjct: 114 QIGDPSGRQTERERLSPAAVQENARGILESLHRIFTHHELYFCPDSSRLGRLTVLNNRSW 173

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
                 ++   E+G  F +  MLS  SV++RLK  + +SF EF+Y + QA+DF +L + +
Sbjct: 174 YKDYDLLEFFSEVGRSFRMGTMLSRHSVQTRLKSAEGMSFTEFSYQLFQAFDFYQLHQLH 233

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
            CR+Q+GG+DQ GNI+ G +   R    +++ LT PL+TT+ G K+GKT   A+WLN++ 
Sbjct: 234 GCRIQLGGTDQLGNIMSGHEFIHRKTGEEVYGLTVPLVTTSMGDKLGKTAGNAVWLNRDK 293

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATEITTM 309
           TSP+ F+QY+  + D  V  + K  T L +SE++ + + Q K+  +  A K +A E+T +
Sbjct: 294 TSPFEFYQYFLRLPDNSVERYLKLFTFLSLSEVENLMEQQRKDPGKRIAHKRLAAEVTKL 353

Query: 310 VHGREEAEKAATAAMECFDMSIHS-QHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
           VHG++  E A       +  SI + + M    +   E+ R        ++ G  T  +  
Sbjct: 354 VHGKDGLESAKRCTTALYHSSIEALEQMSDTEL--QEIFREAPFHEFFLEPG-TTVLDAC 410

Query: 369 RRH------------LKSNAIKINNSIISN-EKLQIKLQDFDSTGNIKLSFGKKN-HII 413
           RR             +K   + IN+    N E++ I  Q   S G   +  GKKN HI+
Sbjct: 411 RRARAIPDGPRGYQMIKDGGVWINHQRAENPEQVLIVGQQILSNGLSLIRVGKKNFHIL 469


>gi|291392439|ref|XP_002712724.1| PREDICTED: tyrosyl-tRNA synthetase 2, mitochondrial-like
           [Oryctolagus cuniculus]
          Length = 478

 Score =  220 bits (561), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 128/397 (32%), Positives = 203/397 (51%), Gaps = 20/397 (5%)

Query: 37  TAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRS 96
           T Y G+D T+ SLH GHL  L+ LF  Q+ GH  I+L+GG T+ +GDPS R + R  + +
Sbjct: 76  TVYCGFDPTSDSLHVGHLLALLGLFHFQRAGHNVIALVGGATARLGDPSGRTKEREALGA 135

Query: 97  QEIQENIEKIKGIFSSFIK-----YGTGKT--DALMLNNETWLCSIKYIDLLREIGSFFS 149
           + +  N   ++    +        +G G+      +L+N  W      +D L  +G  F 
Sbjct: 136 ECVGANARALRAGLEALAANHQQLFGDGRAWGSFTVLDNSAWYGQQHLVDFLAAVGGHFR 195

Query: 150 VNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICG 209
           +  +LS  SV++RLK  + +S  EF Y +LQAYDF  L + Y CR+Q+GGSDQ GNI  G
Sbjct: 196 MGTLLSRLSVQTRLKSPEGMSLAEFLYQVLQAYDFYYLFQRYGCRVQLGGSDQLGNITSG 255

Query: 210 IDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADV 269
            +   +L    +F +  PL+T+ +G K+GK+   A+WL++E TSP+  +Q++    D+ V
Sbjct: 256 YEFVHKLTGEDVFGIMVPLITSTTGAKLGKSAGNAVWLSRERTSPFELYQFFLRQQDSAV 315

Query: 270 VSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATEITTMVHGREEAEKAATAAMECF 327
             + K  T LP+ EID + +L  KE  +   +K +A E+T +VHGRE  + A       +
Sbjct: 316 ERYLKLFTFLPLPEIDHLMQLHLKEPEKRVPQKRLAAEVTKLVHGREGLDSAKRCTQALY 375

Query: 328 DMSIHS------QHMPTI----SISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAI 377
             SI +      Q +  +    S S+  +  G  +L    KA          R +    +
Sbjct: 376 HSSIDALEVLSDQELKELFREASFSELVLDPGTSVLDTCRKANAIPDGPRGYRMITEGGV 435

Query: 378 KINNSIISN-EKLQIKLQDFDSTGNIKLSFGKKNHII 413
            IN+  ++N E + +  Q     G   L  GK+N  +
Sbjct: 436 SINHRQVTNPESVLVVGQHILKNGLSLLKIGKRNFYV 472


>gi|189202938|ref|XP_001937805.1| tyrosyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP]
 gi|187984904|gb|EDU50392.1| tyrosyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP]
          Length = 564

 Score =  220 bits (561), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 126/354 (35%), Positives = 200/354 (56%), Gaps = 30/354 (8%)

Query: 3   AFKSDFLSILSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
             +   LS+L ERGF+  I+  R+ LD L ++  +  Y+G D TA SLH GHL  LM L+
Sbjct: 26  GMQQSMLSLLEERGFVKDIAGGRKTLDWLLTEKRIGVYVGVDPTAPSLHVGHLLPLMALY 85

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRM----MRSQEIQENIEKIKGIFSSF---- 113
           W+   G+  +SL+GGGT  IGDPS R  +R      ++S  ++   E++K ++++     
Sbjct: 86  WMYLHGYYAVSLLGGGTVQIGDPSGRTTARSRQGEDVQSMNVRSINEQLKTLWTNVKCLG 145

Query: 114 ----IKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSL 169
                 Y   +  ++ LNN  WL  +  ++L+R++GS   +  MLS +SV+ R++  + +
Sbjct: 146 IKHQYSYNISRKQSI-LNNRNWLEKLNAVELMRDLGSGMRLGAMLSRDSVKLRMESGEGM 204

Query: 170 SFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIIC------------GIDLGERLK 217
           S  EF+Y + QAYD+  + K+   +LQ+GGSDQ+GNII             G++ G   +
Sbjct: 205 SISEFSYPLFQAYDWWSMYKDRGVQLQIGGSDQYGNIIAGMGAVSHMQKIHGLNGGAEEE 264

Query: 218 TPK--LFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKR 275
            PK   + LT+PLLTTASG K GK+   A+WL+ +M  P++ +QY+    DADV  + K 
Sbjct: 265 DPKEAPYGLTTPLLTTASGEKFGKSAGNAVWLDGQMLKPFDLYQYFLRTADADVERYLKL 324

Query: 276 LTTLPMSEIDRMAKLQGKEINE--AKKIIATEITTMVHGREEAEKAATAAMECF 327
            T LP+  I  +   Q ++ ++  A+  +A EI  + HG  EA+K A A  + F
Sbjct: 325 FTFLPLDSIALLMTSQNRDPSKRIAQHALAQEIVELAHGAAEAKKVAMAHKDAF 378


>gi|86742625|ref|YP_483025.1| tyrosyl-tRNA synthetase [Frankia sp. CcI3]
 gi|86569487|gb|ABD13296.1| tyrosyl-tRNA synthetase [Frankia sp. CcI3]
          Length = 428

 Score =  220 bits (560), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 132/400 (33%), Positives = 212/400 (53%), Gaps = 25/400 (6%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  LS RG +H  ++P EL      G    YIG+D TA SL  G+L  + LL    + G
Sbjct: 5   LLDELSWRGLLHDSTDPAELREHLDSGRRRCYIGFDPTAPSLTIGNLLPMTLLIRAARAG 64

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI----EKIKGIFSSFIKYGTGKTDA 123
              ++L GGGT +IGDPS +   R ++ +QE++ N+    E ++ +F+  +  G      
Sbjct: 65  IGAVTLFGGGTGLIGDPSGKSVERSLLTAQEVRTNMLGQQEIMESVFARALDSGQLPQ-- 122

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAY 182
             ++N  WL  +  I+ LR++G  F V  M+  +SVR RL   +  L++ EF+Y +LQAY
Sbjct: 123 -FVDNADWLDGLGMIEFLRDVGKHFPVTEMVRRDSVRRRLDDPDVGLTYTEFSYSLLQAY 181

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DF  L +++   LQMG SDQWGNI+ GID   R+   ++  LT PLL  + GTK GK+  
Sbjct: 182 DFRRLCEDHGVTLQMGASDQWGNIVAGIDYVRRVLRTQVHGLTCPLLLRSDGTKFGKSEK 241

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM----AKLQGKEINEA 298
           GA+WL+ + TSPY  +Q+  N+ D +   FA   + +    ++R+    A+  GK     
Sbjct: 242 GAVWLSADRTSPYTLYQFVINLSDDEARRFALFFSLIDREPLERLFAEHAEAPGK--RAL 299

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEV-S 347
           ++ +A EIT +VHG+   + A  A+   F   + +            +PT+      +  
Sbjct: 300 QRHLAREITALVHGQAAVDAAEAASAALFSGDVKAIGADLLSDVFADVPTVEEPAARLED 359

Query: 348 RGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNE 387
            G  ++ L++  G A+S  +AR HL ++A+ +N   +  E
Sbjct: 360 DGWPVVDLLIATGLASSKRDAREHLGNHAVLVNGERVGVE 399


>gi|111225605|ref|YP_716399.1| tyrosine tRNA synthetase [Frankia alni ACN14a]
 gi|111153137|emb|CAJ64884.1| tyrosine tRNA synthetase [Frankia alni ACN14a]
          Length = 429

 Score =  219 bits (558), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 129/398 (32%), Positives = 210/398 (52%), Gaps = 20/398 (5%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  LS RG IH  ++P EL      G    YIG+D TA SL  G+L  + LL    + G
Sbjct: 5   LLDELSWRGLIHDSTDPAELRDHLDSGGRRCYIGFDPTAPSLTIGNLLPITLLIRAARAG 64

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSS-FIKYGTGKTDALML 126
              ++L GGGT +IGDPS +   R ++  ++++ N+ + + I  + F +    +     +
Sbjct: 65  LGAVTLFGGGTGLIGDPSGKSAERSLLTVEDVRANVARHREIMETIFGRALAAEEIPAFV 124

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDFV 185
           +N  WL  +  I+ LR++G  F V  M+  +SVR RL   +  L++ EF+Y +LQAYDF 
Sbjct: 125 DNGDWLGGLGMIEFLRDVGKHFPVTEMIRRDSVRRRLDDPDVGLTYTEFSYSLLQAYDFR 184

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L +++   LQMG SDQWGNI+ GID   R+   ++  LT PLL  A GTK GK+  GA+
Sbjct: 185 RLCEDHGVTLQMGASDQWGNIVAGIDYVRRVLRTQVHGLTCPLLLRADGTKFGKSEKGAV 244

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM----AKLQGKEINEAKKI 301
           WL  + TSPY  +Q+  N+ D +   FA   +      ++R+    A+  G+     ++ 
Sbjct: 245 WLTADRTSPYTLYQFLINLSDDEARRFALFFSLTDREPLERLFAEHAEAPGR--RALQRH 302

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTIS--ISKDEVSRG 349
           +A E+T ++HG+   + A  A+   F   + +            +PT++  +++     G
Sbjct: 303 LAREMTALMHGQPAVDAAEAASAALFSGDVKAIGADLISDVFADVPTVTEPLARLAADGG 362

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNE 387
             ++ L++  G A+S  +AR HL + A+ +N   I  E
Sbjct: 363 WPVVDLLLATGLASSRRDAREHLGNRAVLVNGDRIDAE 400


>gi|195120199|ref|XP_002004616.1| GI19509 [Drosophila mojavensis]
 gi|193909684|gb|EDW08551.1| GI19509 [Drosophila mojavensis]
          Length = 464

 Score =  219 bits (557), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 134/418 (32%), Positives = 218/418 (52%), Gaps = 39/418 (9%)

Query: 4   FKSDF----LSILSERGFIHQI----SNPRELDILCSQGVVTAYIGYDLTASSLHAGHLT 55
           FK +F    L  LS+RGF   I    + PR +  L ++   + Y G+D TA SLH G+L 
Sbjct: 19  FKRNFTHKNLLELSDRGFFQSIFPDTAAPR-IKQLFTKSSQSIYAGFDPTADSLHVGNLL 77

Query: 56  QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK 115
            +M L   Q+ GHKPI+L+GG T +IGDPS R   R  +    I+ N++ I+G      K
Sbjct: 78  VIMGLLHCQRAGHKPIALVGGATGLIGDPSGRKTERNQLGQSVIETNLQAIEGQLRRVFK 137

Query: 116 YGTGKTDAL--------------MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
                 D L              ++NN  W  ++  ID +  +G  F +  MLS  SV++
Sbjct: 138 ---NHEDCLWDTRNNKSQLAPLTIVNNAEWYANLNLIDFIANMGRHFRMGSMLSRSSVQT 194

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL-KTPK 220
           RL+ E  +SF EF Y I QAYD++ L + ++C  QMGGSDQ GN++ G +L  R+ +  +
Sbjct: 195 RLESEDGMSFTEFTYQIFQAYDWLHLLRKHNCCFQMGGSDQMGNLMTGHELISRVERNRE 254

Query: 221 LFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLP 280
           +F LT P++T   G K GK+   A+WL++  TSP+  +Q++  + D++V    K  T +P
Sbjct: 255 VFGLTLPIVTNEEGDKFGKSAGNAVWLDESKTSPFALYQFFLRMPDSEVEKLLKLFTFIP 314

Query: 281 MSEIDRMAKLQGKEIN--EAKKIIATEITTMVHGR---EEAEKAATA-------AMECFD 328
           ++E+D++ +   KE    +A+ ++A ++T +VHG    ++AE+   A        +   +
Sbjct: 315 LAEVDQLMREHAKEPEKRKAQTLLAEDVTLLVHGEHGLKQAERVTNALYKGNVDGLAELN 374

Query: 329 MSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISN 386
                Q     ++       GM +L L +KA    + ++A R + +    IN   + N
Sbjct: 375 YEEIKQTFQGATVVDLLTEPGMSILQLAMKAKCFPTESDAVRIISAGGFYINQKRVQN 432


>gi|115436768|ref|NP_001043131.1| Os01g0500900 [Oryza sativa Japonica Group]
 gi|15408650|dbj|BAB64064.1| putative tyrosine-tRNA ligase [Oryza sativa Japonica Group]
 gi|113532662|dbj|BAF05045.1| Os01g0500900 [Oryza sativa Japonica Group]
 gi|125526089|gb|EAY74203.1| hypothetical protein OsI_02083 [Oryza sativa Indica Group]
 gi|215694904|dbj|BAG90095.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 497

 Score =  219 bits (557), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 146/453 (32%), Positives = 222/453 (49%), Gaps = 41/453 (9%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
            +   + +L ERG +   ++        S   + AY G+D TA SLH G+L  L++L W 
Sbjct: 45  IRRSVVEVLRERGLVEATTSESLGSASASPRELKAYCGFDPTAESLHLGNLLGLVVLSWF 104

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG------ 117
           ++ GH  ++L+GG T  +GDPS +   R  +    ++ N   IK +    +         
Sbjct: 105 RRCGHNAVALVGGATGRVGDPSGKSAERPELDLAAVETNSNAIKSLIGQILDRAPEPSQH 164

Query: 118 --TGKTDAL------------------MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFE 157
             +GK   L                  +L+N  W   I  +D L+E+G F  V  M++ E
Sbjct: 165 SQSGKNLNLEQNEQALVNSGEKMGSFQILDNYDWWKDITLLDFLKEVGRFARVGTMIAKE 224

Query: 158 SVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER-L 216
           SV+ RL  E  +S+ EF Y +LQ YDF+ + +N    +Q+GGSDQWGNI  G +L  + L
Sbjct: 225 SVKKRLMSEDGMSYTEFTYQLLQGYDFLYMFRNMGVNVQIGGSDQWGNITAGTELIRKIL 284

Query: 217 KTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRL 276
           +      LT PLL  + GTK GKT  GAIWL+ +M SPY F+QY+ ++ D DV+ F K L
Sbjct: 285 QVEGAHGLTFPLLLKSDGTKFGKTEDGAIWLSPKMLSPYKFYQYFFSVPDIDVIRFMKIL 344

Query: 277 TTLPMSEIDRMA---KLQGKEINEAKKIIATEITTMVHGR---EEAEKAATAAMECFDMS 330
           T + + EI  +    K  G   N  ++ +A E+T  VHG    EEA KA  A        
Sbjct: 345 TFMSLDEIQELEESMKKPGYVPNTIQRRLAEEVTRFVHGEEGLEEALKATEALRPGAQTQ 404

Query: 331 IHSQ-------HMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSI 383
           + SQ        +P+  +   +V +   L+ L V  G   S +  RR +K   + +NN  
Sbjct: 405 LDSQTIEGIADDVPSCFLPYGQVLKS-PLVDLAVSTGLLASKSAVRRLIKQGGLYLNNIR 463

Query: 384 ISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           I +E   ++  D      + LS GKKN ++  +
Sbjct: 464 IDSEDKLVEEGDVVDGKVLLLSAGKKNKMVVRI 496


>gi|332030429|gb|EGI70117.1| Putative tyrosyl-tRNA synthetase, mitochondrial [Acromyrmex
           echinatior]
          Length = 426

 Score =  219 bits (557), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 117/307 (38%), Positives = 177/307 (57%), Gaps = 11/307 (3%)

Query: 38  AYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQ 97
            Y G+D TA SLH G+L  LM L   Q+ GH+ I+L+GG T +IGDPS R   R  +   
Sbjct: 25  VYAGFDPTADSLHIGNLLILMNLLHWQRAGHQVIALVGGATGLIGDPSHRKSERIEIERY 84

Query: 98  EIQENIEKI----KGIFSSFIKY-----GTGKTDALMLNNETWLCSIKYIDLLREIGSFF 148
            I+ENI+ I    + IF++   Y      T     +++NN  W  ++  I+ ++ IG +F
Sbjct: 85  VIEENIKSITKNVETIFNNHRYYFWKNKETALKPLIIVNNLDWYTNVNVIEFIKNIGKYF 144

Query: 149 SVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIIC 208
            +  ML   SV++RL  E  +SF EF Y + QAYD+++L KNY CR Q+GGSDQ GNI+ 
Sbjct: 145 RMGTMLGRSSVQTRLNSEIGMSFTEFTYQVFQAYDWLQLMKNYKCRFQIGGSDQMGNIMS 204

Query: 209 GIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDAD 268
           G DL  +    +++ +T PL+T   G K GK+L  A+WL+   +S +  +QY+    D+D
Sbjct: 205 GYDLITKSMRKEVYGITLPLITAEGGKKFGKSLLNAVWLSPIKSSSFQLYQYFIRAKDSD 264

Query: 269 VVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMEC 326
           V  F K  T +P++ I  + K  +   E  +A+K++A ++T +VHG E    A  A+   
Sbjct: 265 VEKFLKLFTFIPLNTITEIVKNHMNDPEQRKAQKLLAEQVTLLVHGEEGLLAAKRASAAL 324

Query: 327 FDMSIHS 333
           +D SI S
Sbjct: 325 YDKSIES 331


>gi|147901502|ref|NP_001091557.1| tyrosyl-tRNA synthetase, mitochondrial [Bos taurus]
 gi|146186980|gb|AAI40542.1| YARS2 protein [Bos taurus]
 gi|296487352|gb|DAA29465.1| tyrosyl-tRNA synthetase, mitochondrial [Bos taurus]
          Length = 478

 Score =  219 bits (557), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 130/397 (32%), Positives = 209/397 (52%), Gaps = 20/397 (5%)

Query: 37  TAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRS 96
           T Y G+D TA SLH GHL  L+ LF  Q+ GH  I+L+GG T+ +GDPS R + R  + +
Sbjct: 76  TIYCGFDPTADSLHVGHLLALLGLFHFQRAGHNVIALVGGATARLGDPSGRTKEREALDA 135

Query: 97  QEIQENI----EKIKGIFSSFIK-YGTGKT--DALMLNNETWLCSIKYIDLLREIGSFFS 149
           + +Q N     + +K + ++  + +  G+T     +L+N  W      ++ L  +G  F 
Sbjct: 136 ERVQSNARALSQGLKALAANHQQLFANGRTWGSFTVLDNSAWYQKQDLVNFLAAVGGHFR 195

Query: 150 VNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICG 209
           +  +LS  SV++RLK  + +S  EF Y +LQAYDF  L ++Y CR+Q+GGSDQ GNI+ G
Sbjct: 196 MGTLLSRLSVQTRLKSSEGMSLAEFLYQVLQAYDFYYLFQHYGCRVQLGGSDQLGNIMSG 255

Query: 210 IDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADV 269
            +   +L    +F ++ PL+T+ +G K+GK+   A+WLN++ TSP+  +Q++    D  V
Sbjct: 256 YEFIHKLTGEDVFGISVPLITSTTGAKLGKSAGNAVWLNRDKTSPFELYQFFLRQQDDLV 315

Query: 270 VSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATEITTMVHGREEAEKAATAAMECF 327
             + K  T LP+ EID + +L  KE  +   +K +A E+T +VHG+E    A       +
Sbjct: 316 ERYLKLFTFLPLPEIDHIMQLHVKEPEKRGPQKRLAAEVTKLVHGQEGLASAKRCTQALY 375

Query: 328 DMSIHS------QHMPTI----SISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAI 377
             SI +      Q +  +    S S+  +  G  +L    KA          R +    +
Sbjct: 376 HSSIDALEVMSDQELKELFKEASFSELVLDPGTSVLDTCRKANAIPDGPRGYRMITEGGV 435

Query: 378 KINNSIISN-EKLQIKLQDFDSTGNIKLSFGKKNHII 413
            IN+  ++N E + +  Q     G   L  GK+N  I
Sbjct: 436 SINHRQVTNPESVLVVGQHILKNGLSLLKIGKRNFYI 472


>gi|307128554|ref|YP_003880584.1| tyrosyl-tRNA synthetase [Candidatus Sulcia muelleri CARI]
 gi|306483016|gb|ADM89886.1| tyrosyl-tRNA synthetase [Candidatus Sulcia muelleri CARI]
          Length = 425

 Score =  218 bits (556), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 147/400 (36%), Positives = 220/400 (55%), Gaps = 24/400 (6%)

Query: 15  RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLM 74
           RG IH  +   ++       ++T Y G+D T  SLH G+L  +++L   QK G+  IS++
Sbjct: 11  RGLIHDSTYNEQI----KNEIITLYTGFDPTYKSLHIGNLVAIIMLIHFQKYGNNIISVI 66

Query: 75  GGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCS 134
           GGGT IIGDPS ++  R +++ + +  NI  I+   S +I +   K++  +LNN  WL  
Sbjct: 67  GGGTGIIGDPSGKNSERNLIKKELLNYNIRNIRKQLSLYIDFNFKKSE--ILNNYEWLKK 124

Query: 135 IKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCR 194
             +ID +R+IG  FS+N ML+ +S++ R+  ++S+SF EF Y +LQAYDF  L K   C 
Sbjct: 125 NLFIDFVRDIGKSFSINYMLTKDSIKKRISNKKSISFTEFTYQLLQAYDFFYLYKKKKCS 184

Query: 195 LQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA-IWLNKEMTS 253
           LQ+GGSDQWGNI  GI+L  +    K+  LT PL+T   G+K GKT +G  IW++  +TS
Sbjct: 185 LQIGGSDQWGNITSGIELIRKKLGVKVNGLTFPLITKLDGSKFGKTENGENIWIDPNLTS 244

Query: 254 PYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINEAKKIIATEITTMVH 311
           PY F+Q+W NI D     + K  T L   EI  +     K  ++   +K IA+EIT  +H
Sbjct: 245 PYEFYQFWINITDDQAKKYIKIYTFLKKEEIKEIIDNHEKKPKLKLIQKKIASEITIFIH 304

Query: 312 GREEAEKAATAAMECFDMSIHS------------QHMPTISISKDEVSRGMGLLTLIV-K 358
           G+E   K    +   F                  +++P   I     +  + +L L+V K
Sbjct: 305 GKEIFNKVKLISNILFKKEKSIKKISKKDIIYIYKYIPHKKIYIYN-NFNIPILDLLVNK 363

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
           + F  S  +A RHLK N+I IN  I+ +EK  +K  D  S
Sbjct: 364 SNFLKSKKKAIRHLKLNSILINKKIV-DEKFILKKNDLIS 402


>gi|197294590|ref|YP_001799131.1| Tyrosyl-tRNA synthetase [Candidatus Phytoplasma australiense]
 gi|254783622|sp|B1VAA7|SYY_PHYAS RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|171853917|emb|CAM11880.1| Tyrosyl-tRNA synthetase [Candidatus Phytoplasma australiense]
          Length = 415

 Score =  218 bits (556), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 140/423 (33%), Positives = 212/423 (50%), Gaps = 35/423 (8%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           F   L  R  I   S+ +EL  L     +  Y G+D T+ SL  GHL QL ++  L+K G
Sbjct: 3   FYEELKWRNLIKDSSDEKELKNLLDCKKIKFYCGFDPTSDSLTVGHLVQLTMMSLLEKQG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H P  L+GG T +IGDP    E R+++  +   +N + ++      +     +     LN
Sbjct: 63  HSPFILVGGATGLIGDPK-ETEERKLLSLETSLQNAKSLETQLKKIL----FQKKITFLN 117

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W   +  I  LR+ G  F++N ML+ ++V  RL     +SF EF YMILQ+ DF  L
Sbjct: 118 NYEWFSQLDIITFLRKYGKLFNINYMLNKQTVAKRL--SSGISFTEFTYMILQSLDFHHL 175

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK-LFALTSPLLTTASGTKMGKTLSGAIW 246
            KNY  +LQ+GGSDQWGNI  G++L  +L+T    F L++PLL  A+GTK GK+    +W
Sbjct: 176 YKNYGVQLQLGGSDQWGNITSGLELIRKLETTSHAFGLSTPLLLNANGTKFGKSEQDVLW 235

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIAT 304
           L+ + TSPY  +QY+ N+ D +VV+  K+LT +P  EI  + K  LQ  +   A+K +A 
Sbjct: 236 LDPQKTSPYKIYQYFLNLADEEVVNCLKQLTLIPKEEILELEKATLQTPQKRLAQKALAN 295

Query: 305 EITTMVHGR----------------EEAEKAATAAMECFDMSIHSQHMPTISISKDEVSR 348
            I  +++ +                ++ E    A     + ++ S     +SI   E   
Sbjct: 296 NIVNLIYSQKVLQECHKTNEVLFLNKKKESFQEADFTLLNKTLFSYETSLVSIPLSEA-- 353

Query: 349 GMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGK 408
                  +VK    TS  EAR  ++  +I+I N  I N    I  ++      + L  GK
Sbjct: 354 -------LVKTQLTTSKREAREFIQRGSIQIFNEKIKNPDYLIDKKNTLFNKYVLLKKGK 406

Query: 409 KNH 411
           KN+
Sbjct: 407 KNN 409


>gi|309807304|ref|ZP_07701273.1| tyrosine--tRNA ligase [Lactobacillus iners LactinV 03V1-b]
 gi|308166286|gb|EFO68496.1| tyrosine--tRNA ligase [Lactobacillus iners LactinV 03V1-b]
          Length = 364

 Score =  218 bits (555), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 137/369 (37%), Positives = 194/369 (52%), Gaps = 25/369 (6%)

Query: 7   DFLSILSERGFIHQISNPREL-DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           D L  L  RG I+Q ++ + L + L     +T Y G D T  SLH GHL   M+L   Q 
Sbjct: 2   DILEDLKWRGAINQQTDEQGLREYLQQHKDLTLYCGTDPTGDSLHIGHLIPFMILKRFQM 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            G+ PI L+GG T  IGDPS R   R +   ++++ N + +            G  +  +
Sbjct: 62  AGYHPIILIGGATGAIGDPSGRKTERVLQSEEQVRRNEKSLTAQMEKLF----GTENFEI 117

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN +WL  +  +D LR+ G  F VN ML+ + V SRL     +S+ EF Y I+QA DF 
Sbjct: 118 VNNASWLSKLTLLDFLRDYGKLFQVNTMLNKDIVASRLAT--GISYTEFTYQIMQAIDFY 175

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSG 243
            L KN +  LQ+GG DQWGNI  GIDL  R++      F LT PL+  + GTK GK+   
Sbjct: 176 YLNKNKNVTLQIGGGDQWGNITGGIDLIHRIEGADHPAFGLTIPLMLKSDGTKFGKSAGV 235

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKI 301
           AIWL+ E TSPY F+Q+W N DD DV+ + K  T L   EI+ +A    KE  +  A++ 
Sbjct: 236 AIWLDPEKTSPYEFYQFWINQDDRDVIKYLKYFTFLSHQEIEDLAISVEKEPWKRLAQRK 295

Query: 302 IATEITTMVHGREEAEKAATAAMECF-----DMSIHS-----QHMPTISISKDEVSRGMG 351
           +A E+T  VHG      A       F     D+S+       ++ P + ISK+  +    
Sbjct: 296 LAEEVTKFVHGEAGLRDAQFITNALFEGNIKDLSVKQIEQGFKNAPYVEISKESKN---- 351

Query: 352 LLTLIVKAG 360
           L+ L+V+ G
Sbjct: 352 LVDLLVETG 360


>gi|169847762|ref|XP_001830590.1| tyrosine-tRNA ligase [Coprinopsis cinerea okayama7#130]
 gi|116508326|gb|EAU91221.1| tyrosine-tRNA ligase [Coprinopsis cinerea okayama7#130]
          Length = 498

 Score =  218 bits (555), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 133/443 (30%), Positives = 209/443 (47%), Gaps = 57/443 (12%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S  L  ++ RGFI  ++   +L           Y G D TA SLH GHL  L+ L     
Sbjct: 30  SAVLDEVTARGFIQDVTRRADLAKALEAKPQGLYTGIDPTAPSLHIGHLIPLLCLAHFHL 89

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG-------- 117
            GHK I L+G  T  IGDPS R   R++ +++++  NI  +    ++F +          
Sbjct: 90  HGHKIIPLIGSATGRIGDPSGRSTERKLQQTEQLNANIAGLTRSVTNFFERAFVHASRRL 149

Query: 118 ----TGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLE 173
                 + +  +++N  W      +D L+ +G    +N M++ ESVR+RL  +Q +SF E
Sbjct: 150 GLQRDAQPEVKVVSNHVWHEKFSMLDFLQVVGIHARINTMMNRESVRARLSSQQGISFTE 209

Query: 174 FNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK---------------- 217
           F Y +LQAYDF  L +N+ C +Q+GGSDQWGNI+ GI+L  +L                 
Sbjct: 210 FTYQLLQAYDFHYLNQNHGCTIQIGGSDQWGNIVAGIELIGKLSPSSTAQGTGKEATPPT 269

Query: 218 -TPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRL 276
            +P  F +T+PLLTT SG K GK+   A+WL++ +TS ++F+QY+    D+ +  +    
Sbjct: 270 TSPDAFGITTPLLTTPSGEKFGKSAGNAVWLDENLTSVFDFYQYFFKSPDSVLPLYLNLF 329

Query: 277 TTLPMSEIDRMAKLQG--KEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQ 334
           T LP  +I  + +      E+   +K +A E+T MVHG    E+A T     F  SI + 
Sbjct: 330 TFLPRPKIAEIVETHNARPELRLGQKTLAAEVTEMVHGASALERAQTLTSLLFPTSISAS 389

Query: 335 HMPT--------------------------ISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
             P                           + I + E+     ++ L  + G   S +  
Sbjct: 390 ASPDGSAQSDYSGLTTEQITSAFDSSDPRLVYIPEAELVESTPVVKLASRCGLVASNSAG 449

Query: 369 RRHLKSNAIKINNSIISNEKLQI 391
           R  + S  + +NNS + + K  I
Sbjct: 450 RSLVASRGLYLNNSPVPDIKTTI 472


>gi|126338727|ref|XP_001377352.1| PREDICTED: hypothetical protein [Monodelphis domestica]
          Length = 609

 Score =  218 bits (554), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 128/417 (30%), Positives = 209/417 (50%), Gaps = 38/417 (9%)

Query: 26  ELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPS 85
           EL  L + G  T Y G+D TASSLH GHL  ++ L   Q+ GH  I+++GG T+ +GDPS
Sbjct: 196 ELPELLAGGAQTVYCGFDPTASSLHVGHLLPVLGLLHFQRAGHHVIAVVGGATARLGDPS 255

Query: 86  FRDESRRMMRSQEIQENIEKIKG-----------IFSSFIKYGTGKTDALMLNNETWLCS 134
            R + R  + ++ +++N + ++            +F     +GT      +L+N  W   
Sbjct: 256 GRSKERTALSAERVRDNAKALRASLEQLAAEHRRLFHDGRPWGT----FTVLDNAAWYSH 311

Query: 135 IKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCR 194
           +  +D L  +G  F +  +LS  SV++RL   + +S  EF Y +LQAYDF  L + Y CR
Sbjct: 312 LALVDFLGAVGGSFRMGPLLSRHSVQARLGSPEGMSLAEFLYPVLQAYDFYHLHQRYGCR 371

Query: 195 LQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSP 254
           +Q+GGSDQ GNI+ G +   R+    +F +T PL+T+ +G K+GK+   A+WL++E+TSP
Sbjct: 372 VQLGGSDQLGNIMSGHEFVRRVTGKDVFGITVPLITSTAGAKLGKSAGNAVWLHRELTSP 431

Query: 255 YNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINEAKKIIATEITTMVHG 312
           + F+Q++    D  V  + K  T LP+ EI+ + ++  K  E    +  +ATE+T  VHG
Sbjct: 432 FEFYQFFVRQPDDCVERYLKLFTFLPLPEIEHIMQMHMKAPEKRGPQIRLATEVTKFVHG 491

Query: 313 REEAEKAATAAMECFDMSIHSQHMPTISISKDE---------------VSRGMGLLTLIV 357
           +E    A       +  SI +     + I  DE               +  G  +L    
Sbjct: 492 QEGLGSAKRCTQALYHCSIDA-----LEIMSDEELKELFKEAPFSELVLEPGTSVLDTCR 546

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISN-EKLQIKLQDFDSTGNIKLSFGKKNHII 413
           KA          + +    + IN+  ++N E + +  +     G   L  GK+N  +
Sbjct: 547 KANAIPDGPRGYQMITEGGVSINHKPVTNPESVLVVGEHILKNGLSLLKIGKRNFYV 603


>gi|50289233|ref|XP_447047.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49526356|emb|CAG59980.1| unnamed protein product [Candida glabrata]
          Length = 462

 Score =  218 bits (554), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 138/406 (33%), Positives = 209/406 (51%), Gaps = 29/406 (7%)

Query: 7   DFLSILSERGFIHQISNPREL--DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           + L  L +RG + Q+S P E   + L S   V  Y G D TA S+H G+L  LM+L    
Sbjct: 24  NVLRELRDRGLVSQVSAPEEKLEEQLESGQKVKLYCGVDPTAKSIHLGNLVPLMVLLHFY 83

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFI-----KYGTG 119
             GH  ++L+GG T  +GDPS R   R +M  +    N+  I G    F       Y T 
Sbjct: 84  VRGHDIVTLVGGATGCVGDPSGRTTERSLMEDKTRLSNVSSISGQLEKFFINGLAYYNTK 143

Query: 120 KTDA--------LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSF 171
             D         +  NN  W   +K +D L   G    V  ML+ +SV +RL  + SL F
Sbjct: 144 NKDRNETLPGKHIKENNYNWWKDVKMLDFLANYGRHIRVQSMLARDSVTARLNTQNSLGF 203

Query: 172 LEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL--KTPKLFALTSPLL 229
            EF Y ILQAYDF  L K Y   +Q+GG+DQWGNI  GIDL  RL  +T + + +T PLL
Sbjct: 204 NEFTYQILQAYDFFHLNKTYGVSIQVGGNDQWGNITAGIDLISRLSSRTKQAYGVTVPLL 263

Query: 230 TTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK 289
            TASG K GK+   A++++  +++PY+ +Q++ N  D DV  F K  + L + EI+ M K
Sbjct: 264 QTASGEKFGKSAGNAVFIDPSISTPYDIFQFFLNTLDEDVPRFLKTFSFLTIEEIESMTK 323

Query: 290 LQGKE--INEAKKIIATEITTMVHGREEAEKAATAAMECF----DMSIHSQHMPTISISK 343
              ++  +   +K++A EIT M+ G    +KA + +   F    D  +    +  I + +
Sbjct: 324 RHNEKPHLRLGQKMLAKEITDMLFGVGNGDKAQSISNIIFGTMEDKEMKLSGLELIDMFR 383

Query: 344 D-----EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSII 384
           +     +  RG  L+ L+ +   + S +EARR ++  +I ++ S +
Sbjct: 384 EARILQQAKRGESLVALVSRLTHS-SKSEARRKIEQGSIYLHTSRV 428


>gi|157126543|ref|XP_001660920.1| tyrosyl-tRNA synthetase [Aedes aegypti]
 gi|108873226|gb|EAT37451.1| tyrosyl-tRNA synthetase [Aedes aegypti]
          Length = 463

 Score =  218 bits (554), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 135/398 (33%), Positives = 207/398 (52%), Gaps = 32/398 (8%)

Query: 12  LSERGFIHQISNPRELD---ILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L +RGF   +     +D    +      T Y G+D TA SLH G+L  ++ L   Q+ GH
Sbjct: 30  LQDRGFFQDVFPAEAIDKARSMLGASPQTVYAGFDPTADSLHVGNLLVIIGLLHAQRAGH 89

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI----EKIKGIFSSFIKY---GTGKT 121
           +PI+L+GG T  IGDPS R   R+ M    +  N+     ++  IF +  K+     G +
Sbjct: 90  QPIALLGGATGQIGDPSGRKTERQAMLLDMVNHNLACIGSQMDTIFQNHRKFLWEKRGHS 149

Query: 122 DAL----MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYM 177
            AL    ++NN  W   + ++  +  +G  F +  MLS  SV+SRL+ E  +SF EF Y 
Sbjct: 150 GALKPVLVVNNADWYRELNFVQFISSVGRHFRMGSMLSRASVQSRLQSEGGMSFTEFTYQ 209

Query: 178 ILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
           I QAYD++ L K ++CR Q+GGSDQ GNI+ G +L  R+    ++ LT PL+T   G K 
Sbjct: 210 IFQAYDWLHLLKAHNCRFQLGGSDQMGNIMSGHELISRVDRKDVYGLTLPLITNEEGDKF 269

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR-MAKLQ-GKEI 295
           GK+   A+WL+ + TSPY  +Q++    D++V    K LT +P+ EI   MA+ Q   E+
Sbjct: 270 GKSAGNAVWLSGDKTSPYALYQFFVRTPDSEVEKLLKLLTFMPLDEIRSVMARHQRTPEL 329

Query: 296 NEAKKIIATEITTMVHGREEAEKA-------------ATAAMECFDMSIHSQHMPTISIS 342
            EA+K +A E+T +VHG E  +KA             A   +E  D+       P + I 
Sbjct: 330 WEAQKKLAQELTLLVHGEEGLKKAEDITAALYSGNVEALGELEVKDIKQTFGGAPVVDIL 389

Query: 343 KDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKIN 380
            +    GM +L + ++A    +  +A R + +    IN
Sbjct: 390 PEP---GMTVLQVAMRAKCFPTEKDAIRIIGAGGFTIN 424


>gi|20130383|ref|NP_611967.1| CG16912 [Drosophila melanogaster]
 gi|50401704|sp|Q9W107|SYYM_DROME RecName: Full=Probable tyrosyl-tRNA synthetase, mitochondrial;
           AltName: Full=Tyrosine--tRNA ligase; Short=TyrRS; Flags:
           Precursor
 gi|7291852|gb|AAF47271.1| CG16912 [Drosophila melanogaster]
 gi|157816396|gb|ABV82192.1| FI02013p [Drosophila melanogaster]
          Length = 464

 Score =  218 bits (554), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 128/403 (31%), Positives = 217/403 (53%), Gaps = 29/403 (7%)

Query: 12  LSERGFIHQI----SNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           L++RGF H I    + PR +  L ++G  + Y G+D TA SLH G+L  +M L   Q+ G
Sbjct: 31  LTDRGFFHGIFPDTAAPR-MKQLFTRGQQSIYAGFDPTADSLHVGNLLVIMGLIHCQRAG 89

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI----EKIKGIFSSF-------IKY 116
           H+PI+L+GG T +IGDPS R   R  +    I+ N+    ++++ +F +         K 
Sbjct: 90  HRPIALVGGATGLIGDPSGRKTERNQLGETVIETNLKAIEQQLRRVFENHENCLWDSKKQ 149

Query: 117 GTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNY 176
                  +++NN  W   ++ ID +  +G  F +  MLS  SV+SRL+ E  +SF EF Y
Sbjct: 150 KLPLAPLIIVNNADWYADLQLIDFVANMGRHFRMGSMLSRSSVQSRLESEDGMSFTEFTY 209

Query: 177 MILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK-LFALTSPLLTTASGT 235
            I QAYD++ L + ++C  QMGGSDQ GN++ G +L  R++  + +F LT PL+TT  G 
Sbjct: 210 QIFQAYDWLHLLRRHNCCFQMGGSDQTGNLMTGHELISRVERKREVFGLTLPLVTTEEGD 269

Query: 236 KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI 295
           K GK+   A+WL+   TSP+  +Q++  + D++V    K  T +P+ +++++ +   KE 
Sbjct: 270 KFGKSAGNAVWLDGNKTSPFALYQFFLRMPDSEVEKLLKLFTFIPLPQVEQLMREHTKEP 329

Query: 296 N--EAKKIIATEITTMVHGR---EEAEKAATA-------AMECFDMSIHSQHMPTISISK 343
              +A+ ++A ++T +VHG    ++AE+   A        +   ++S   Q     ++  
Sbjct: 330 EKRKAQTLLAEDVTLLVHGESGLKQAERVTNALYKGNVEGLAELNLSEIQQTFQGATMVN 389

Query: 344 DEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISN 386
                GM +L L +KA    +  +A R + +    +N   + N
Sbjct: 390 LLTEPGMSILELAMKAKCFPTETDAVRIINAGGFYVNQKRVQN 432


>gi|126338735|ref|XP_001377943.1| PREDICTED: hypothetical protein [Monodelphis domestica]
          Length = 637

 Score =  217 bits (553), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 128/417 (30%), Positives = 209/417 (50%), Gaps = 38/417 (9%)

Query: 26  ELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPS 85
           EL  L + G  T Y G+D TASSLH GHL  ++ L   Q+ GH  I+++GG T+ +GDPS
Sbjct: 224 ELPELLAGGAQTVYCGFDPTASSLHVGHLLPVLGLLHFQRAGHHVIAVVGGATARLGDPS 283

Query: 86  FRDESRRMMRSQEIQENIEKIKG-----------IFSSFIKYGTGKTDALMLNNETWLCS 134
            R + R  + ++ +++N + ++            +F     +GT      +L+N  W   
Sbjct: 284 GRSKERTALSAERVRDNAKALRASLEQLAAEHRRLFHDGRPWGT----FTVLDNAAWYSH 339

Query: 135 IKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCR 194
           +  +D L  +G  F +  +LS  SV++RL   + +S  EF Y +LQAYDF  L + Y CR
Sbjct: 340 LALVDFLGAVGGSFRMGPLLSRHSVQARLGSPEGMSLAEFLYPVLQAYDFYHLHQRYGCR 399

Query: 195 LQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSP 254
           +Q+GGSDQ GNI+ G +   R+    +F +T PL+T+ +G K+GK+   A+WL++E+TSP
Sbjct: 400 VQLGGSDQLGNIMSGHEFVRRVTGKDVFGITVPLITSTAGAKLGKSAGNAVWLHRELTSP 459

Query: 255 YNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINEAKKIIATEITTMVHG 312
           + F+Q++    D  V  + K  T LP+ EI+ + ++  K  E    +  +ATE+T  VHG
Sbjct: 460 FEFYQFFVRQPDDCVERYLKLFTFLPLPEIEHIMQMHMKAPEKRGPQIRLATEVTKFVHG 519

Query: 313 REEAEKAATAAMECFDMSIHSQHMPTISISKDE---------------VSRGMGLLTLIV 357
           +E    A       +  SI +     + I  DE               +  G  +L    
Sbjct: 520 QEGLGSAKRCTQALYHCSIDA-----LEIMSDEELKELFKEAPFSELVLEPGTSVLDTCR 574

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISN-EKLQIKLQDFDSTGNIKLSFGKKNHII 413
           KA          + +    + IN+  ++N E + +  +     G   L  GK+N  +
Sbjct: 575 KANAIPDGPRGYQMITEGGVSINHKPVTNPESVLVVGEHILKNGLSLLKIGKRNFYV 631


>gi|85057589|ref|YP_456505.1| tyrosyl-tRNA synthetase [Aster yellows witches'-broom phytoplasma
           AYWB]
 gi|84789694|gb|ABC65426.1| tyrosyl-tRNA synthetase [Aster yellows witches'-broom phytoplasma
           AYWB]
          Length = 430

 Score =  217 bits (553), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 142/418 (33%), Positives = 215/418 (51%), Gaps = 26/418 (6%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           F   L  R  I   +N  ++  L     V  Y G+D T+ SL  GHL Q+ ++  +Q+ G
Sbjct: 20  FYEELKWRNLIKDCNNEIQVKELLDNNQVKFYCGFDPTSHSLTVGHLIQITMILLMQRQG 79

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H P+ L+GG T +IGDP    E R+++  +   +N + I+    S +K          +N
Sbjct: 80  HLPVILVGGATGLIGDPK-ETEERKLLSLENSLQNAKSIE----SQLKTILLNKQVEFVN 134

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  I  I  LR  G FF++N MLS   V  RL     +SF EF+YMILQ+ DF  L
Sbjct: 135 NYQWLSQIDIISFLRNYGKFFNINYMLSKHVVAKRL--ASGISFTEFSYMILQSLDFHHL 192

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERL-KTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
            KN+  RLQ+GGSDQWGNI  G+++  +L K      +++PLL  + GTK GK+    +W
Sbjct: 193 YKNHKVRLQLGGSDQWGNITSGLEIIRKLEKKSDALGVSTPLLLNSDGTKFGKSEKRVLW 252

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIAT 304
           LN  MTSPY  +QY+ N+ D +V+++ K LT +P   I  + K  L+  +   A+K +  
Sbjct: 253 LNPLMTSPYEIYQYFLNVSDKEVINYLKMLTLIPKKGILELEKKTLENPQKRLAQKALTQ 312

Query: 305 EITTMVHGREEAEKA--------ATAAMECF---DMSIHSQHMPTISISKDEVSRGMGLL 353
            I  ++H  +  ++         + A  E F   D  +  + +   SI +D     + L+
Sbjct: 313 SIINLIHSSDILQECIKTNQILFSNAKKESFQEKDFILLQKTLFCHSIKED-----ILLV 367

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
             +V+   ATS +EAR  +K N IK+ N  I +    I  ++      I L  GKKN+
Sbjct: 368 DALVQTKLATSKSEAREFIKDNTIKLFNQKIKSLDFIITKENTLFGKYILLKKGKKNN 425


>gi|97197487|sp|Q2NJG7|SYY_AYWBP RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
          Length = 413

 Score =  217 bits (553), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 142/418 (33%), Positives = 215/418 (51%), Gaps = 26/418 (6%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           F   L  R  I   +N  ++  L     V  Y G+D T+ SL  GHL Q+ ++  +Q+ G
Sbjct: 3   FYEELKWRNLIKDCNNEIQVKELLDNNQVKFYCGFDPTSHSLTVGHLIQITMILLMQRQG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H P+ L+GG T +IGDP    E R+++  +   +N + I+    S +K          +N
Sbjct: 63  HLPVILVGGATGLIGDPK-ETEERKLLSLENSLQNAKSIE----SQLKTILLNKQVEFVN 117

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  I  I  LR  G FF++N MLS   V  RL     +SF EF+YMILQ+ DF  L
Sbjct: 118 NYQWLSQIDIISFLRNYGKFFNINYMLSKHVVAKRL--ASGISFTEFSYMILQSLDFHHL 175

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERL-KTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
            KN+  RLQ+GGSDQWGNI  G+++  +L K      +++PLL  + GTK GK+    +W
Sbjct: 176 YKNHKVRLQLGGSDQWGNITSGLEIIRKLEKKSDALGVSTPLLLNSDGTKFGKSEKRVLW 235

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIAT 304
           LN  MTSPY  +QY+ N+ D +V+++ K LT +P   I  + K  L+  +   A+K +  
Sbjct: 236 LNPLMTSPYEIYQYFLNVSDKEVINYLKMLTLIPKKGILELEKKTLENPQKRLAQKALTQ 295

Query: 305 EITTMVHGREEAEKA--------ATAAMECF---DMSIHSQHMPTISISKDEVSRGMGLL 353
            I  ++H  +  ++         + A  E F   D  +  + +   SI +D     + L+
Sbjct: 296 SIINLIHSSDILQECIKTNQILFSNAKKESFQEKDFILLQKTLFCHSIKED-----ILLV 350

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
             +V+   ATS +EAR  +K N IK+ N  I +    I  ++      I L  GKKN+
Sbjct: 351 DALVQTKLATSKSEAREFIKDNTIKLFNQKIKSLDFIITKENTLFGKYILLKKGKKNN 408


>gi|16768608|gb|AAL28523.1| GM10508p [Drosophila melanogaster]
          Length = 442

 Score =  217 bits (553), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 128/403 (31%), Positives = 217/403 (53%), Gaps = 29/403 (7%)

Query: 12  LSERGFIHQI----SNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           L++RGF H I    + PR +  L ++G  + Y G+D TA SLH G+L  +M L   Q+ G
Sbjct: 9   LTDRGFFHGIFPDTAAPR-MKQLFTRGQQSIYAGFDPTADSLHVGNLLVIMGLIHCQRAG 67

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI----EKIKGIFSSF-------IKY 116
           H+PI+L+GG T +IGDPS R   R  +    I+ N+    ++++ +F +         K 
Sbjct: 68  HRPIALVGGATGLIGDPSGRKTERNQLGETVIETNLKAIEQQLRRVFENHENCLWDSKKQ 127

Query: 117 GTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNY 176
                  +++NN  W   ++ ID +  +G  F +  MLS  SV+SRL+ E  +SF EF Y
Sbjct: 128 KLPLAPLIIVNNADWYADLQLIDFVANMGRHFRMGSMLSRSSVQSRLESEDGMSFTEFTY 187

Query: 177 MILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK-LFALTSPLLTTASGT 235
            I QAYD++ L + ++C  QMGGSDQ GN++ G +L  R++  + +F LT PL+TT  G 
Sbjct: 188 QIFQAYDWLHLLRRHNCCFQMGGSDQTGNLMTGHELISRVERKREVFGLTLPLVTTEEGD 247

Query: 236 KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI 295
           K GK+   A+WL+   TSP+  +Q++  + D++V    K  T +P+ +++++ +   KE 
Sbjct: 248 KFGKSAGNAVWLDGNKTSPFALYQFFLRMPDSEVEKLLKLFTFIPLPQVEQLMREHTKEP 307

Query: 296 N--EAKKIIATEITTMVHGR---EEAEKAATA-------AMECFDMSIHSQHMPTISISK 343
              +A+ ++A ++T +VHG    ++AE+   A        +   ++S   Q     ++  
Sbjct: 308 EKRKAQTLLAEDVTLLVHGESGLKQAERVTNALYKGNVEGLAELNLSEIQQTFQGATMVN 367

Query: 344 DEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISN 386
                GM +L L +KA    +  +A R + +    +N   + N
Sbjct: 368 LLTEPGMSILELAMKAKCFPTETDAVRIINAGGFYVNQKRVQN 410


>gi|195489803|ref|XP_002092892.1| GE11414 [Drosophila yakuba]
 gi|194178993|gb|EDW92604.1| GE11414 [Drosophila yakuba]
          Length = 464

 Score =  217 bits (552), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 128/403 (31%), Positives = 217/403 (53%), Gaps = 29/403 (7%)

Query: 12  LSERGFIHQI----SNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           L++RGF   I    + PR +  L + G  + Y G+D TA SLH G+L  +M L   Q+ G
Sbjct: 31  LTDRGFFQGIFPDTAAPR-MKQLFTSGQQSIYAGFDPTADSLHVGNLLVIMGLIHCQRAG 89

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI----EKIKGIFSSF-------IKY 116
           HKPI+L+GG T +IGDPS R   R  +    I+ N+    ++++ +F +         K+
Sbjct: 90  HKPIALVGGATGLIGDPSGRKTERNQLGETVIETNLKAIEQQLRQVFENHENCLWDSKKH 149

Query: 117 GTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNY 176
            +      ++NN  W   ++ ID +  +G  F +  MLS  SV+SRL+ E  +SF EF Y
Sbjct: 150 KSPLPPLTIVNNADWYADLQLIDFVANMGRHFRMGSMLSRSSVQSRLESEDGMSFTEFTY 209

Query: 177 MILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK-LFALTSPLLTTASGT 235
            I QAYD++ L + ++C  QMGGSDQ GN++ G +L  R++  + +F LT PL+TT  G 
Sbjct: 210 QIFQAYDWLHLLRRHNCCFQMGGSDQTGNLMTGHELISRVERKREVFGLTLPLVTTEEGD 269

Query: 236 KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI 295
           K GK+   A+WL+   TSP+  +Q++  + D++V    K  T +P+ +++++ +   KE 
Sbjct: 270 KFGKSAGNAVWLDGNKTSPFALYQFFLRMPDSEVEKLLKLFTFIPLPQVEQLMREHTKEP 329

Query: 296 N--EAKKIIATEITTMVHGR---EEAEKAATAAMECFDMSIHSQHMPTISISKDEVS--- 347
              +A+ ++A ++T +VHG    ++AE+   A  +     +   ++P I  +    +   
Sbjct: 330 EKRKAQTLLAEDVTLLVHGESGLKQAERVTNALYKGKVEGLAELNLPEIQQTFQGATMVN 389

Query: 348 ----RGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISN 386
                GM +L L +KA    +  +A R + +    +N   + N
Sbjct: 390 LLTEPGMSILELAMKAKCFPTETDAVRIINAGGFYVNQKRVQN 432


>gi|195429808|ref|XP_002062949.1| GK21649 [Drosophila willistoni]
 gi|194159034|gb|EDW73935.1| GK21649 [Drosophila willistoni]
          Length = 466

 Score =  216 bits (549), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 129/403 (32%), Positives = 215/403 (53%), Gaps = 29/403 (7%)

Query: 12  LSERGFIHQI----SNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           L++RGF   I    + PR +  L + G  + Y G+D TA SLH G+L  +M L   Q+ G
Sbjct: 33  LTDRGFFQSIFPDTAAPR-MKHLFTSGRQSIYAGFDPTADSLHVGNLLVIMGLLHCQRAG 91

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK------YGTGKT 121
           HKPI+L+GG T +IGDPS R   R  +    I+ N++ I+       K      + T K 
Sbjct: 92  HKPIALVGGATGLIGDPSGRKTERNQLGESVIETNLKAIEQQLLRVFKNHEDCLWDTKKN 151

Query: 122 DALM-----LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNY 176
            + +     +NN  W  ++  ++ +  +G  F +  MLS  SV+SRL+ E  +SF EF Y
Sbjct: 152 KSPLAPLTIVNNAEWYANLHLVEFIANMGRHFRMGSMLSRSSVQSRLESEDGMSFTEFTY 211

Query: 177 MILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK-LFALTSPLLTTASGT 235
            I QAYD++ L + ++C  QMGGSDQ GN++ G +L  R++  + +F LT P++T   G 
Sbjct: 212 QIFQAYDWLHLLQKHNCCFQMGGSDQMGNLMTGHELISRVERKREVFGLTLPIVTNEEGD 271

Query: 236 KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI 295
           K GK+   A+WL+ E TSP+  +Q++  + D++V    K  T +P+ E++++ +   KE 
Sbjct: 272 KFGKSAGNAVWLDPEKTSPFALYQFFLRMPDSEVEKLLKLFTFIPLPEVEQLIREHQKEP 331

Query: 296 N--EAKKIIATEITTMVHGR---EEAEKAATA-------AMECFDMSIHSQHMPTISISK 343
              +A+ ++A ++T +VHG    ++AE+   A       A+   + +   Q +    +  
Sbjct: 332 EKRKAQTLLAEDVTLLVHGENGLKQAERVTNALYKGNVEALAELNYAEIKQTLQGAILVD 391

Query: 344 DEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISN 386
                GM +L L +KA    + N+A R + +    +N   + N
Sbjct: 392 MLKESGMSILQLALKAKCFPTENDAVRIINAGGFYVNQKRVQN 434


>gi|195380215|ref|XP_002048866.1| GJ21079 [Drosophila virilis]
 gi|194143663|gb|EDW60059.1| GJ21079 [Drosophila virilis]
          Length = 464

 Score =  215 bits (548), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 128/402 (31%), Positives = 210/402 (52%), Gaps = 27/402 (6%)

Query: 12  LSERGFIHQI---SNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           LSERGF   I   +   +L  L  +   T Y G+D TA SLH G+L  +M L   Q+ GH
Sbjct: 31  LSERGFFQSIFPDTAAPKLKELFERSAQTIYAGFDPTADSLHVGNLLVIMGLLHCQRAGH 90

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK------YGTGKTD 122
           KPI+L+GG T +IGDPS R   R  +    +  N++ I+       K      + T K  
Sbjct: 91  KPIALVGGATGLIGDPSGRKTERNQLGESVLDANLQAIERQLRKVFKNHEDCLWDTRKNR 150

Query: 123 ALM-----LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYM 177
           + +     +NN  W  ++  ID +  +G  F +  MLS  SV+SRL+ E  +SF EF Y 
Sbjct: 151 SPLAPLTIVNNAEWYANLNLIDFVANMGRHFRMGSMLSRSSVQSRLESEDGMSFTEFTYQ 210

Query: 178 ILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL-KTPKLFALTSPLLTTASGTK 236
           I QAYD++ L + ++C  QMGGSDQ GN++ G +L  R+ +  ++F +T P++T   G K
Sbjct: 211 IFQAYDWLHLLRKHNCCFQMGGSDQMGNLMTGHELISRVERNREVFGMTLPIVTNEEGDK 270

Query: 237 MGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN 296
            GK+   A+WL++  TSP+  +Q++  + D++V    K  T +P+ E++++ +   KE  
Sbjct: 271 FGKSAGNAVWLDENKTSPFALYQFFLRMPDSEVEKLLKLFTFIPLPEVEQLMREHAKEPE 330

Query: 297 --EAKKIIATEITTMVHGR---EEAEKAATA-------AMECFDMSIHSQHMPTISISKD 344
             +A+ ++A ++T +VHG    ++AE+   A        +   + +   Q     ++   
Sbjct: 331 KRKAQTLLAEDVTLLVHGEHGLKQAERVTNALYKGNVDGLAELNYAEIKQTFQGAAVVDI 390

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISN 386
               GM +L L +KA    +  +A R + +    IN   + N
Sbjct: 391 LTEPGMSILQLAMKAKCFPTETDAVRIINAGGFYINQKRVQN 432


>gi|169596004|ref|XP_001791426.1| hypothetical protein SNOG_00750 [Phaeosphaeria nodorum SN15]
 gi|160701208|gb|EAT92245.2| hypothetical protein SNOG_00750 [Phaeosphaeria nodorum SN15]
          Length = 539

 Score =  214 bits (546), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 129/355 (36%), Positives = 198/355 (55%), Gaps = 41/355 (11%)

Query: 8   FLSILSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
            LS+L ERGF+  ++  R+ LD + ++  + AY+G D TA SLH GHL   M LFW+   
Sbjct: 1   MLSVLEERGFVKDVAGERKTLDWVLTEKPIGAYVGVDPTAPSLHVGHLLPFMALFWMYLH 60

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEK-----------------IKGI 109
           G+   SL+GGGT+ IGDPS R  +R   ++  IQ +  K                 IK  
Sbjct: 61  GYNTFSLLGGGTATIGDPSGRTTARSS-QAANIQRHNSKNMHIQLRNLWTNVKCLGIKHQ 119

Query: 110 FSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSL 169
           +S+ I +   K + L  NNETWL  +  IDL+R +GS   +  ML+ +SV+ R++  + +
Sbjct: 120 YSNAISW---KKEPL--NNETWLQQLSAIDLMRGLGSGMRLGAMLARDSVKVRMENGEGM 174

Query: 170 SFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGID-------LGERLKTPKL- 221
           +  EF+Y + QAYD+  + +    +LQ+GGSDQ+GNI  G+D        G+     +L 
Sbjct: 175 AMSEFSYPLFQAYDWWHMYQRNGVQLQIGGSDQYGNICAGMDAISYMRRAGDHHSNSELD 234

Query: 222 -------FALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAK 274
                  + LT+PLLTTASG K GK+   A+WL+ +M S ++ +QY+    D DV  + K
Sbjct: 235 ENPLRATYGLTTPLLTTASGEKFGKSAGNAVWLDPKMLSSFDLYQYFVKTADNDVERYLK 294

Query: 275 RLTTLPMSEIDRMAKLQGKEINE--AKKIIATEITTMVHGREEAEKAATAAMECF 327
             T LP+++I+ +   Q K+ ++  A+ I+A EI  + HG + A+ A  A  E F
Sbjct: 295 LFTFLPINQINLLMAQQRKDESKRLAQHILAKEIVELAHGAKSAKMAEEAHKEAF 349


>gi|118082933|ref|XP_416363.2| PREDICTED: hypothetical protein [Gallus gallus]
          Length = 548

 Score =  214 bits (545), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 133/439 (30%), Positives = 217/439 (49%), Gaps = 37/439 (8%)

Query: 8   FLSILSERGFIHQI----SNPRELDILCSQG--VVTAYIGYDLTASSLHAGHLTQLMLLF 61
            L+   ERG   ++        +L+ L   G   V  Y G+D TA SLH GHL  +M L 
Sbjct: 108 LLAEQCERGLFQEVFPAQGADEQLEALLEPGRPPVAVYCGFDPTADSLHVGHLPAVMALL 167

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSS--------F 113
             Q+ GH  ++++GG T+ +GDPS R+ +R  + ++ ++ +   ++             F
Sbjct: 168 HFQRAGHTVLAVVGGATARLGDPSGRERAREPLEAERVRAHARGLREGLGRLLENHRALF 227

Query: 114 IKYGTGKT--DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSF 171
              G G+    A +L+N  WL     +D L   G    +  +LS ++ ++RL+  + +S 
Sbjct: 228 WPAGGGRPLGRAELLDNAWWLSREPLLDFLCGAGGRLRMGTLLSRQACQARLRSAEGMSL 287

Query: 172 LEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT 231
            EF Y  LQAYDF+ L +++ CR+Q+GG+DQ GNI+ G +L  ++    +F +T PL+T+
Sbjct: 288 AEFLYPALQAYDFLHLHRHHGCRVQLGGADQMGNIMSGYELVTKMTGTDVFGITVPLITS 347

Query: 232 ASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ 291
            +G K+GKT   A+WLN++ TSP+  +Q++    D  V  + K  T LP+ EID + ++ 
Sbjct: 348 TTGDKLGKTAGNAVWLNRDKTSPFELYQFFVRQQDDIVEKYLKLFTFLPLEEIDHIMEMH 407

Query: 292 GKEINE--AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSR- 348
            +E  +   +K +A E+T +VHGRE  E    +A  C     HS      ++S  E+   
Sbjct: 408 AREPEKWGPQKRLAAEVTKLVHGREGLE----SAKRCTKALYHSSVEALEAMSDQELQEL 463

Query: 349 -------------GMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISN-EKLQIKLQ 394
                        G  LL L  KA          + +    + +N   ++N E + I  Q
Sbjct: 464 FRQAPSAELILEPGTTLLDLCRKANAIPHGPSGYQKITDGGVSVNGIRVTNPETVLILGQ 523

Query: 395 DFDSTGNIKLSFGKKNHII 413
                G   L  GKKN+ I
Sbjct: 524 HILKNGVSLLRIGKKNYYI 542


>gi|328715390|ref|XP_001944544.2| PREDICTED: probable tyrosyl-tRNA synthetase, mitochondrial-like
           [Acyrthosiphon pisum]
          Length = 469

 Score =  214 bits (544), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 141/402 (35%), Positives = 212/402 (52%), Gaps = 30/402 (7%)

Query: 38  AYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQ 97
            Y G+D TA SLH G+L  ++ L   Q+  HK I+L+GG T+ IGDPS + + R    SQ
Sbjct: 69  VYAGFDPTADSLHIGNLLVIINLLHWQRANHKVIALIGGATAQIGDPSGKSKDRDKQSSQ 128

Query: 98  EIQENIEKI----KGIFSSFIKYGTGKTDAL----MLNNETWLCSIKYIDLLREIGSFFS 149
            +  NI+ I    + IF +  KY   + D L    ++NN  W   I  ID +  IG  F 
Sbjct: 129 MLSHNIKGITHSLQSIFDNHAKYFWKQKDPLPEPIIINNMEWYKGIGVIDFMNNIGRHFR 188

Query: 150 VNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICG 209
           +  MLS +SV+SRL     +SF EF Y   QAYD++ L KNY C  Q+GG+DQ GNI+ G
Sbjct: 189 MGTMLSRDSVKSRLS-GSGMSFTEFTYQTFQAYDWLHLFKNYKCLFQIGGNDQMGNIMSG 247

Query: 210 IDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADV 269
            +L  R +  K++ LT PL+TT SG K GK+   AIWLN + TSP+  +Q+     DADV
Sbjct: 248 QELISRQENAKVYGLTVPLITTDSGDKYGKSAQNAIWLNSDRTSPFELYQFMIRTIDADV 307

Query: 270 VSFAKRLTTLPMSEIDRMAKLQGKEINEAKKI----IATEITTMVHGREEAEKAATAAME 325
               K  T L + EI  +  ++  +    K+I    +A ++TT+VHG E  ++A  A   
Sbjct: 308 EKLLKMFTFLSLPEIAEL--MRRHKATPDKRIPHESLARQVTTLVHGEEGLKEAIVATSA 365

Query: 326 CFDMSIHSQHMPTISISKD-EVSRGMGLLTLIVKAGFAT-----------STNEARRHLK 373
            +D SI +  + T+S++   ++  G  ++ L+++ G              +  +A R + 
Sbjct: 366 LYDNSIET--LSTLSVNDILKIFNGATVVELMLEPGITVLKMAMNAKCFLTDKDAYRIIS 423

Query: 374 SNAIKINNSIISNEKLQIKLQDFDSTGNIKL-SFGKKNHIIC 414
           +    IN+  I+N    + L       NI L   GK+N+ I 
Sbjct: 424 AGGFYINHQRITNIDEIVTLSVHILPNNISLVRVGKRNYWIV 465


>gi|115717870|ref|XP_781450.2| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
 gi|115956114|ref|XP_001186796.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
          Length = 697

 Score =  213 bits (543), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 135/415 (32%), Positives = 216/415 (52%), Gaps = 24/415 (5%)

Query: 21  ISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSI 80
           + +  EL  L +    + Y G D TA SLH G+L  L+ L   Q+ GH+ I+L+GG T++
Sbjct: 281 VQSSDELPKLLTSSPQSIYCGVDPTAESLHIGNLLALIALIHCQRAGHQCIALIGGATAL 340

Query: 81  IGDPSFRDESRRMMRSQEIQENIEKI----KGIFSS----FIKYGTGKTDALMLNNETWL 132
           IGDPS +   R  +    ++ N   I    + IF++    F K      D  ++NN+ W 
Sbjct: 341 IGDPSGKSTERESLHPDLVERNAASIHQSLQRIFTNHERLFWKRDKTLPDIRIMNNQDWY 400

Query: 133 CSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYD 192
            S   +  L   G FF +  MLS +SV++RL   + +SF EF Y I QAYDF+ L + Y 
Sbjct: 401 KSENLVQFLGTYGRFFRMGSMLSRQSVQTRLNSPEGMSFSEFTYQIFQAYDFLHLHEQYG 460

Query: 193 CRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMT 252
           C +Q+GG+DQ GNI+ G DL  R    +++ LT PL+T+A+G K+GKT   A+W+N++ T
Sbjct: 461 CNIQIGGTDQLGNIMSGHDLIRRTAGNEVYGLTIPLVTSATGDKLGKTAGNAVWINRDKT 520

Query: 253 SPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKKIIATEITTMV 310
           S ++ +QY+  + D DV    K  T LP+ +ID + +      E  +A++++A ++  +V
Sbjct: 521 SEFDLYQYFIRMHDNDVEKSLKLFTFLPLQDIDAVVRKHKAKPEKRKAQRLLAEQVLLLV 580

Query: 311 HGREEAEKAA----------TAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           HG E  EKA             A+E   +   SQ     S  +  +  G+ +  + V AG
Sbjct: 581 HGEEGLEKARRLTEALYSSDPGALERLSVEEVSQLFGGGSFVEIMLEPGLTVYQVAVAAG 640

Query: 361 FATSTNEARRHLKSNAIKINNSIISN--EKLQIKLQDFDSTGNIKLSFGKKNHII 413
            A   +     ++   + +N   ++N  E LQ  L    +   + L  GKKN+ +
Sbjct: 641 -ALPKDRGVGIIEDGGVYVNKQRVTNPHEVLQKGLHILSNNVTL-LRIGKKNYTL 693


>gi|330929905|ref|XP_003302815.1| hypothetical protein PTT_14783 [Pyrenophora teres f. teres 0-1]
 gi|311321566|gb|EFQ89082.1| hypothetical protein PTT_14783 [Pyrenophora teres f. teres 0-1]
          Length = 611

 Score =  213 bits (543), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 123/353 (34%), Positives = 198/353 (56%), Gaps = 28/353 (7%)

Query: 3   AFKSDFLSILSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
             +   LS+L ERGF+  ++  R+ L+ L ++  +  Y+G D TA SLH GHL  LM L+
Sbjct: 59  GMQQSMLSLLEERGFVKDVAGGRKRLEWLLTEKRIGVYVGVDPTAPSLHVGHLLPLMALY 118

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRM----MRSQEIQENIEKIKGIFSSF---- 113
           W+   G+  +SL+GGGT  IGDPS R  +R      ++S  ++   E++K ++++     
Sbjct: 119 WMYLHGYYTVSLLGGGTVQIGDPSGRTTARSRQGEDVQSMNVRSINEQLKTLWTNVKCLG 178

Query: 114 IKYGTGKT---DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLS 170
           IK+           +LNN  WL  +  ++L+R++GS   +  MLS +SV+ R++  + ++
Sbjct: 179 IKHQYSHNISRKQSILNNRNWLEKLNAVELMRDLGSGMRLGAMLSRDSVKLRMESGEGMA 238

Query: 171 FLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL------------GERLKT 218
             EF+Y + QAYD+  + K+   +LQ+GGSDQ+GNII G+              G   + 
Sbjct: 239 ISEFSYPLFQAYDWWSMYKDRGVQLQIGGSDQYGNIIAGMGAVSHMRKIHGLSGGTEEED 298

Query: 219 PK--LFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRL 276
           PK   + LT+PLLTT SG K GK+   A+WL+ +M  P++ +QY+    DADV  + K  
Sbjct: 299 PKEAPYGLTTPLLTTPSGEKFGKSAGNAVWLDGQMLKPFDLYQYFLRTADADVERYLKLF 358

Query: 277 TTLPMSEIDRMAKLQGKEINE--AKKIIATEITTMVHGREEAEKAATAAMECF 327
           T LP+  I  +   Q ++ ++  A+  +A EI  + HG  EA+K A A  + F
Sbjct: 359 TFLPLDSIALLMTSQNRDPSKRVAQHTLAQEIVELAHGAAEAKKVAMAHKDAF 411


>gi|294657922|ref|XP_002770518.1| DEHA2E21318p [Debaryomyces hansenii CBS767]
 gi|199433054|emb|CAR65860.1| DEHA2E21318p [Debaryomyces hansenii]
          Length = 523

 Score =  213 bits (542), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 119/315 (37%), Positives = 170/315 (53%), Gaps = 26/315 (8%)

Query: 39  YIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQE 98
           Y G D TA SLH G+L  LM+L      GH  + L+GG T  +GDPS R   R  +  ++
Sbjct: 100 YCGADPTAESLHLGNLLPLMVLLHFNLRGHDVVGLVGGATGAVGDPSGRTTERTQLAEEK 159

Query: 99  IQENIEKIKGIFSSFIKYGT-----------GKTDALMLNNETWLCSIKYIDLLREIGSF 147
             +N+ +I+   S+F+K G             +      NN  W  SIK +D L   G  
Sbjct: 160 RLDNVNRIQNQLSNFLKQGVEYAKSRNFPIQKQGQIFTENNAKWWESIKILDFLSTYGKH 219

Query: 148 FSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNII 207
             V+ ML  +S++SRLK E  L F EF+Y +LQAYDF  L KN    LQ+GG+DQWGNI 
Sbjct: 220 IRVSAMLGRDSIQSRLKSEHGLGFNEFSYQVLQAYDFWHLFKNEKVNLQIGGNDQWGNIT 279

Query: 208 CGIDLGERLK-------TPK------LFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSP 254
            G+DL  RL+        PK       F +T PLLTT +G K GK+   AI++N+++T+P
Sbjct: 280 AGVDLISRLQKHFNRVSKPKDKIEEPSFGMTVPLLTTPTGEKFGKSAGNAIFINEKLTTP 339

Query: 255 YNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE--INEAKKIIATEITTMVHG 312
           Y  +QY+ N  D  V    K  T LPM+ I+++ +   ++  I  A++I+A E+T ++HG
Sbjct: 340 YQLYQYFINTPDEIVAKLLKVFTILPMATIEKIVQKHNEDPGIRAAQRILAREVTDLIHG 399

Query: 313 REEAEKAATAAMECF 327
               +K A      F
Sbjct: 400 NGMGDKMAYVTSFLF 414


>gi|321477483|gb|EFX88442.1| hypothetical protein DAPPUDRAFT_305427 [Daphnia pulex]
          Length = 459

 Score =  213 bits (542), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 142/427 (33%), Positives = 218/427 (51%), Gaps = 43/427 (10%)

Query: 12  LSERGFIHQISNPRELDI--LCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
           L+ERG +  +  P  L +  L SQ     Y G+D TA SLH G+L  LM +   Q+ GH+
Sbjct: 30  LNERGLLQDVFPPPSLALQKLLSQPQC-FYAGFDPTADSLHIGNLLVLMTMLHCQRAGHQ 88

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI----EKIKGIFSSFIKY----GTGKT 121
            I+L+GG T++IGDPS +   R  +  + ++EN     E I  IF +  KY      G  
Sbjct: 89  TIALIGGATALIGDPSGKSSERIALPEENVKENTNVIGENITRIFQNHQKYIWEKNRGPL 148

Query: 122 DAL-MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
             + ++NN  W  ++     L   G  F V  MLS  SV+SR+  E  +SF EF+Y +LQ
Sbjct: 149 KPVKLVNNADWYNNVSITKFLSTAGRHFRVGAMLSRNSVQSRINSESGISFTEFSYQVLQ 208

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
            YD++ L + Y CR Q+GGSDQ GNI+ G +L  R+   ++F LT PL+T  +G+K+GKT
Sbjct: 209 GYDWLHLLQKYKCRFQIGGSDQMGNIVSGHELISRMGLEEVFGLTIPLVTNEAGSKLGKT 268

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINEA 298
              A+W+    TSPY  +Q++  + D++V    K  T     EI  + + Q    E   A
Sbjct: 269 AGNAVWITPSKTSPYELYQFFMRVKDSEVEQLLKLFTFCSTDEISTIMEKQTNKPESRVA 328

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISK-DEVSRG-------- 349
            + +A ++T +VHG E   K+A    E    S  +  +  +  S+ +E  RG        
Sbjct: 329 HRKLAQQVTLLVHG-ENGLKSAERITEAL-YSKSADSLARLQPSELNETFRGATMVDILL 386

Query: 350 ---MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
                +L +++KA    + N+ARR + +  + IN         Q+K  D+       LS 
Sbjct: 387 EPATSVLDMVMKANCFANENDARRIILAGGLHIN---------QVKCTDYTEI----LSL 433

Query: 407 GKKNHII 413
           G+  HI+
Sbjct: 434 GR--HIL 438


>gi|167515470|ref|XP_001742076.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163778700|gb|EDQ92314.1| predicted protein [Monosiga brevicollis MX1]
          Length = 370

 Score =  213 bits (541), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 111/302 (36%), Positives = 173/302 (57%), Gaps = 14/302 (4%)

Query: 32  SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESR 91
           S G    Y G+D TA SLH G+L  +M L      GH  ++L+GG T  +GDPS R+  R
Sbjct: 41  SSGERVFYCGFDPTARSLHLGNLLSIMGLLHAALDGHYAVALIGGATGHVGDPSGRNSER 100

Query: 92  RMMRSQEIQENIEKIKGIFSSFIKYGTG---KTDA---------LMLNNETWLCSIKYID 139
             + S  + EN   I     +  +  +    +TDA          ++NN  W   +  +D
Sbjct: 101 DPLSSDALFENAISIDLSLQTIFQNASDMAKETDAERPELCDHLKLVNNVAWYERMSVLD 160

Query: 140 LLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGG 199
            + ++G    ++ ML  +SV+SRL + + +S+ EF+Y + Q +DFVEL + Y C +Q+GG
Sbjct: 161 FMVKVGKHARMHTMLGKDSVKSRLAQPEGMSYAEFSYQLFQGWDFVELNQRYLCTIQLGG 220

Query: 200 SDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQ 259
           SDQWGN++ GI+L  + +  +  A+T PL+TTA+G K GK++  AIWLN++MTSPY  +Q
Sbjct: 221 SDQWGNMLAGIELLRKCQDVQGHAITLPLMTTAAGVKFGKSMGNAIWLNEDMTSPYQLYQ 280

Query: 260 YWRNIDDADVVSFAKRLTTLPMSEIDRMA--KLQGKEINEAKKIIATEITTMVHGREEAE 317
           +  N DDAD     + LT LP+  I+ +        E  EA++++A ++  +VHG E  E
Sbjct: 281 FLFNTDDADCAKLLRALTFLPLDHINNIVADHTAAPEKREAQRVLAEQVLRLVHGNEGLE 340

Query: 318 KA 319
           +A
Sbjct: 341 RA 342


>gi|195027758|ref|XP_001986749.1| GH21538 [Drosophila grimshawi]
 gi|193902749|gb|EDW01616.1| GH21538 [Drosophila grimshawi]
          Length = 464

 Score =  212 bits (540), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 128/406 (31%), Positives = 211/406 (51%), Gaps = 35/406 (8%)

Query: 12  LSERGFIHQI----SNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           LS+RGF   I    + P+  ++  S    T Y G+D TA SLH G+L  +M L   Q+ G
Sbjct: 31  LSDRGFFQSIFPDTAGPKMKELFRS-APQTVYAGFDPTADSLHVGNLLVIMGLLHCQRAG 89

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL--- 124
           H+PI+L+GG T +IGDPS R   R  M    I+ N++ I+       K      D L   
Sbjct: 90  HQPIALVGGATGLIGDPSGRKTERNQMGVSVIESNLQAIELQLRKVFK---NHEDCLWDA 146

Query: 125 -----------MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLE 173
                      ++NN  W  ++  ID +  +G  F +  MLS  SV+SRL+ E  +SF E
Sbjct: 147 RKDSSPFVPLKIVNNAEWYANLNLIDFVANMGRHFRMGSMLSRSSVQSRLESEDGMSFTE 206

Query: 174 FNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK-LFALTSPLLTTA 232
           F Y I QAYD++ L + ++C  QMGGSDQ GN++ G +L  R++  + +F +T P++T  
Sbjct: 207 FTYQIFQAYDWLHLLRKHNCCFQMGGSDQTGNLMTGHELISRVEGNREVFGMTLPIVTNE 266

Query: 233 SGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG 292
            G K GK+   A+WL+++ TSP+  +Q++  + D++V    K  T +P+ E++++ +   
Sbjct: 267 EGDKFGKSAGNAVWLDEKKTSPFALYQFFLRMPDSEVEKLLKLFTFIPLPEVEQLMREHA 326

Query: 293 KEIN--EAKKIIATEITTMVHGR---EEAEKAATA-------AMECFDMSIHSQHMPTIS 340
           KE    +A+ ++A ++T +VHG    ++AE+   A        +   + +   Q     +
Sbjct: 327 KEPEKRKAQTLLAEDVTLLVHGEHGLKQAERVTNALYKGNVDGLAELNYTEIKQTFQGAT 386

Query: 341 ISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISN 386
           +       GM +L L +KA    +  +A R + +    IN   + N
Sbjct: 387 VVDILTEPGMSILQLAMKAKCFPTETDAVRIINAGGFYINQKRVQN 432


>gi|194886727|ref|XP_001976671.1| GG19890 [Drosophila erecta]
 gi|190659858|gb|EDV57071.1| GG19890 [Drosophila erecta]
          Length = 464

 Score =  212 bits (540), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 127/403 (31%), Positives = 215/403 (53%), Gaps = 29/403 (7%)

Query: 12  LSERGFIHQI----SNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           L++RGF   I    + PR +  L + G  + Y G+D TA SLH G+L  +M L   Q+ G
Sbjct: 31  LTDRGFFQGIFPDTAAPR-MKQLFTGGQQSIYAGFDPTADSLHVGNLLVIMGLIHCQRAG 89

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI----EKIKGIFSSFI-------KY 116
           H+PI+L+GG T +IGDPS R   R  +    I+ N+    ++++ +F +         K 
Sbjct: 90  HRPIALVGGATGLIGDPSGRKTERNQLGETVIETNLKAIEQQLRRVFENHEHCLWDSNKQ 149

Query: 117 GTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNY 176
                   ++NN  W   ++ ID +  +G  F +  MLS  SV+SRL+ E  +SF EF Y
Sbjct: 150 KFPLPPLTVVNNADWYADLQLIDFVANMGRHFRMGSMLSRSSVQSRLESEDGMSFTEFTY 209

Query: 177 MILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK-LFALTSPLLTTASGT 235
            I QAYD++ L + ++C  QMGGSDQ GN++ G +L  R++  + +F LT PL+TT  G 
Sbjct: 210 QIFQAYDWLHLLRRHNCCFQMGGSDQTGNLMTGHELISRVERKREVFGLTLPLVTTEEGD 269

Query: 236 KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI 295
           K GK+   A+WL+   TSP+  +Q++  + D++V    K  T +P+ +++++ +   KE 
Sbjct: 270 KFGKSAGNAVWLDGNKTSPFALYQFFLRMPDSEVEKLLKLFTFIPLPQVEQLMREHTKEP 329

Query: 296 N--EAKKIIATEITTMVHGR---EEAEKAATAAMECFDMSIHSQHMPTISISKDEVS--- 347
              +A+ ++A ++T +VHG    ++AE+   A  +     +   ++P I  +    +   
Sbjct: 330 EKRKAQTLLAEDVTLLVHGESGLKQAERVTNALYKGNVEGLAELNLPEIQQTFQGATMVN 389

Query: 348 ----RGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISN 386
                GM +L L +KA    +  +A R + +    +N   + N
Sbjct: 390 LLTEPGMSILELAMKAKCFPTETDAVRIINAGGFYVNQKRVQN 432


>gi|307178905|gb|EFN67433.1| Probable tyrosyl-tRNA synthetase, mitochondrial [Camponotus
           floridanus]
          Length = 426

 Score =  212 bits (539), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 128/386 (33%), Positives = 207/386 (53%), Gaps = 21/386 (5%)

Query: 22  SNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSII 81
           +N  ++  L ++     Y G+D TA SLH G+L  LM L   Q+ GH+ I+L+GG T +I
Sbjct: 9   TNTNKIIDLLNKSPQCVYAGFDPTADSLHIGNLLILMNLLHWQRAGHQVIALVGGATGLI 68

Query: 82  GDPSFRDESRRMMRSQEIQENIEKIKGIF--------SSFIKYGTGKTDALML-NNETWL 132
           GDPS R + R  M    ++EN++ I            + F K        L++ NN  W 
Sbjct: 69  GDPSHRKKERVEMDKYLMEENLKSIINNIEIIFNNHQTYFWKNRQEHLKPLIIVNNLDWY 128

Query: 133 CSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYD 192
            ++  I+ +R IG +F +  ML   SV+SRL  +  +SF EF Y + QAYD+ +L K Y 
Sbjct: 129 TNVNVIEFVRSIGKYFRMGTMLGRASVQSRLNSDTGMSFTEFTYQVFQAYDWFQLMKKYK 188

Query: 193 CRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMT 252
           CR Q+GGSDQ GNI+ G DL  + +  +++ +T PL+T   G K GK+L  A+WL+   +
Sbjct: 189 CRFQIGGSDQMGNIMSGYDLITKTEKQEVYGITLPLITAEGGKKFGKSLLNAVWLSSTKS 248

Query: 253 SPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATEITTMV 310
           S +  +QY+    D+DV  F K  T +P+++I  +    ++  E   A+KI+A ++T +V
Sbjct: 249 SSFQLYQYFIRTKDSDVEKFLKLFTFIPLNKITEIMNDHMKSSEDRRAQKILAEQVTLLV 308

Query: 311 HGREEAEKAATAAMECFDMSIHS-QHMPTISISK--------DEVSR-GMGLLTLIVKAG 360
           HG +    A  A+   +D SI S   M  + ++         D +S  G+ +  L  KA 
Sbjct: 309 HGEDGLLAAKRASAALYDKSIESFTRMNALELADVFEDATIVDILSEPGLTIYDLARKAK 368

Query: 361 FATSTNEARRHLKSNAIKINNSIISN 386
              + ++A+R + +    +N+  I+N
Sbjct: 369 CFKTDHDAQRIITAGGFYVNHQKITN 394


>gi|195586539|ref|XP_002083031.1| GD24918 [Drosophila simulans]
 gi|194195040|gb|EDX08616.1| GD24918 [Drosophila simulans]
          Length = 463

 Score =  212 bits (539), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 125/403 (31%), Positives = 216/403 (53%), Gaps = 29/403 (7%)

Query: 12  LSERGFIHQI----SNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           L++RGF   I    + PR +  L + G  + Y G+D TA SLH G+L  +M L   Q+ G
Sbjct: 31  LTDRGFFQGIFPDTAAPR-MKQLFTSGRQSIYAGFDPTADSLHVGNLLVIMGLIHCQRAG 89

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI----EKIKGIFSSF-------IKY 116
           H+PI+L+GG T +IGDPS R   R  +    I+ N+    ++++ +F +         K 
Sbjct: 90  HRPIALVGGATGLIGDPSGRKTERNQLGETVIETNLKAIEQQLRQVFENHENCLWDSKKQ 149

Query: 117 GTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNY 176
                  +++NN  W   ++ ID +  +G  F +  MLS  SV+SR++ E  +SF EF Y
Sbjct: 150 KFPLAPLIIVNNADWYADLQLIDFVANMGRHFRMGSMLSRSSVQSRMESEDGMSFTEFTY 209

Query: 177 MILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK-LFALTSPLLTTASGT 235
            I QAYD++ L + ++C  QMGGSDQ GN++ G +L  R++  + +F LT PL+TT  G 
Sbjct: 210 QIFQAYDWLHLLRRHNCCFQMGGSDQTGNLMTGHELISRVERKREVFGLTLPLVTTEEGD 269

Query: 236 KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI 295
           K GK+   A+WL+   TSP+  +Q++  + D++V    K  T +P+ +++++ +   +E 
Sbjct: 270 KFGKSAGNAVWLDCNKTSPFALYQFFLRMPDSEVEKLLKLFTFIPLPQVEQLMREHTREP 329

Query: 296 N--EAKKIIATEITTMVHGR---EEAEKAATAAMECFDMSIHSQHMPTISISKDEVS--- 347
              +A+ ++A ++T +VHG    ++AE+   A  +     +   ++P I  +    +   
Sbjct: 330 EKRKAQTLLAEDVTLLVHGESGLKQAERVTNALYKGNVEGLAQLNLPEIQQTFQGATMVN 389

Query: 348 ----RGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISN 386
                GM +L L +KA    +  +A R + +    +N   + N
Sbjct: 390 LLTEPGMSILELAMKAKCFPTETDAVRIINAGGFYVNQKRVQN 432


>gi|195353270|ref|XP_002043128.1| GM11790 [Drosophila sechellia]
 gi|194127216|gb|EDW49259.1| GM11790 [Drosophila sechellia]
          Length = 464

 Score =  212 bits (539), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 125/403 (31%), Positives = 216/403 (53%), Gaps = 29/403 (7%)

Query: 12  LSERGFIHQI----SNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           L++RGF   I    + PR +  L + G  + Y G+D TA SLH G+L  +M L   Q+ G
Sbjct: 31  LTDRGFFQGIFPDTAAPR-MKQLFTSGRQSIYAGFDPTADSLHVGNLLVIMGLIHCQRAG 89

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI----EKIKGIFSSF-------IKY 116
           H+PI+L+GG T +IGDPS R   R  +    I+ N+    ++++ +F +         K 
Sbjct: 90  HRPIALVGGATGLIGDPSGRKTERNQLGETVIETNLKAIEQQLRQVFENHENCLWDSKKQ 149

Query: 117 GTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNY 176
                  +++NN  W   ++ ID +  +G  F +  MLS  SV+SR++ E  +SF EF Y
Sbjct: 150 KFPLAPLIIVNNADWYADLQLIDFVANMGRHFRMGSMLSRSSVQSRMESEDGMSFTEFTY 209

Query: 177 MILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK-LFALTSPLLTTASGT 235
            I QAYD++ L + ++C  QMGGSDQ GN++ G +L  R++  + +F LT PL+TT  G 
Sbjct: 210 QIFQAYDWLHLLRRHNCCFQMGGSDQTGNLMTGHELISRVERKREVFGLTLPLVTTEEGD 269

Query: 236 KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI 295
           K GK+   A+WL+   TSP+  +Q++  + D++V    K  T +P+ +++++ +   +E 
Sbjct: 270 KFGKSAGNAVWLDCNKTSPFALYQFFLRMPDSEVEKLLKLFTFIPLPQVEQLMREHTREP 329

Query: 296 N--EAKKIIATEITTMVHGR---EEAEKAATAAMECFDMSIHSQHMPTISISKDEVS--- 347
              +A+ ++A ++T +VHG    ++AE+   A  +     +   ++P I  +    +   
Sbjct: 330 EKRKAQTLLAEDVTLLVHGESGLKQAERVTNALYKGNVEGLAQLNLPEIQQTFQGATMVN 389

Query: 348 ----RGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISN 386
                GM +L L +KA    +  +A R + +    +N   + N
Sbjct: 390 LLTEPGMSILELAMKAKCFPTETDAVRIINAGGFYVNQKRVQN 432


>gi|196000568|ref|XP_002110152.1| hypothetical protein TRIADDRAFT_21492 [Trichoplax adhaerens]
 gi|190588276|gb|EDV28318.1| hypothetical protein TRIADDRAFT_21492 [Trichoplax adhaerens]
          Length = 416

 Score =  210 bits (535), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 125/384 (32%), Positives = 197/384 (51%), Gaps = 31/384 (8%)

Query: 37  TAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRS 96
           +AY G D TA SLH G+L  +M L  L++ GH P  ++GG T +IGDPS R + R  +  
Sbjct: 6   SAYAGIDPTAESLHVGNLVTIMTLLHLRRAGHIPYFVIGGSTGLIGDPSGRLKERDPLSI 65

Query: 97  QEIQENIEKIKGIFSSFIKYGTG---KTDALM-----------LNNETWLCSIKYIDLLR 142
             +  N+++I+   S  +          D L+           LNN TW  +   ++ L 
Sbjct: 66  NTVTHNVQEIQCQISDLLHNDFNMWSDKDQLLFKQSRNFGDVILNNATWYENFNIVNFLS 125

Query: 143 EIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQ 202
            +G  F +  MLS +SV+ RL   + +   EF Y + QAYDF  +    +C +Q+GGSDQ
Sbjct: 126 SVGRHFRMGAMLSRDSVKQRLNSPEGMCLTEFFYQVFQAYDFQRMCAERNCHIQVGGSDQ 185

Query: 203 WGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWR 262
           WGNI+ G +   ++   ++  LT PLLT ASG K+GK+L  AIWL++  TS Y F+QY+ 
Sbjct: 186 WGNIVAGCEFIHKVDGKRVHGLTVPLLTNASGEKLGKSLGNAIWLSRAKTSLYEFYQYFM 245

Query: 263 NIDDADVVSFAKRLTTLPMSEIDRMA--KLQGKEINEAKKIIATEITTMVHGREE----- 315
             +DADV  F K  T +P+++I  +    L+  E     KI+A E+  +VHG  +     
Sbjct: 246 RTEDADVEKFLKIFTFIPVNDIRNIVARHLEKPEERYGTKILANEVARLVHGGNKHTILR 305

Query: 316 --AEKAATAAMECFDMSIHS-----QHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
                   +     D   +      + +P I +  D+ SR M  L L    G   S N+ 
Sbjct: 306 FFYYYFYLSLYIFIDFLANKLQQILRDVPNIQLKWDK-SRNMAELAL--NCGAVPSFNQG 362

Query: 369 RRHLKSNAIKINNSIISNEKLQIK 392
           R+ ++S    +N++ I++ K +++
Sbjct: 363 RKLIESGGFYVNDTKITDYKAKVE 386


>gi|307213308|gb|EFN88760.1| Probable tyrosyl-tRNA synthetase, mitochondrial [Harpegnathos
           saltator]
          Length = 462

 Score =  210 bits (534), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 132/399 (33%), Positives = 206/399 (51%), Gaps = 24/399 (6%)

Query: 12  LSERGFIHQIS---NPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L ERG    I    +  E+  L ++     Y G+D TA SLH G+L  LM L   Q+ GH
Sbjct: 32  LHERGMYENIFPNISTNEIVELLNKSPQCVYAGFDPTADSLHIGNLLILMNLLHWQRAGH 91

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIE----KIKGIFSS----FIKYGTGK 120
           + I+L+GG T +IGDPS R   R  +    I+EN++     I+ IF++    F KY    
Sbjct: 92  QVIALVGGATGLIGDPSHRKSERIEIEKCLIEENVKSIMKNIETIFTNHENYFWKYKQES 151

Query: 121 TDALML-NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
              L++ NN  W   +  I+ +R IG +  +  ML   SV++RL  +  +SF EF Y + 
Sbjct: 152 LRPLIIVNNLNWYTDVNVIEFVRNIGKYLRMGTMLGRASVQTRLNSDTGMSFTEFTYQVF 211

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK 239
           QAYD+++L   Y+C  Q+GGSDQ GNI+ G DL  +    +++ +T PL+T   G K GK
Sbjct: 212 QAYDWLQLMIKYNCCFQIGGSDQMGNIMSGYDLIAKSTRKQVYGITIPLITAEGGKKFGK 271

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA--KLQGKEINE 297
           +L  AIWL+   +S +  +QY+    D+DV    K  T L + +I+ +    ++  E   
Sbjct: 272 SLMNAIWLSSMKSSSFQLYQYFIRTKDSDVKKLFKLFTFLSLDKINEIVDEHMKNPEQRI 331

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIH----------SQHMPTISISKDEVS 347
           A+KI+A ++T +VHG E    A  A+   +D SI           +      +I      
Sbjct: 332 AQKILAQQVTLLVHGEEGLFAAKRASAVLYDQSIEILVKMNASELADVFEAATIVDVLSE 391

Query: 348 RGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISN 386
            G+ +  L +KA    S ++A+R + +    IN+  I+N
Sbjct: 392 PGLTVYNLAIKAKCFKSNDDAQRIITAGGFYINHKKITN 430


>gi|290973260|ref|XP_002669367.1| predicted protein [Naegleria gruberi]
 gi|284082913|gb|EFC36623.1| predicted protein [Naegleria gruberi]
          Length = 492

 Score =  209 bits (533), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 121/310 (39%), Positives = 177/310 (57%), Gaps = 22/310 (7%)

Query: 39  YIGYDLTASSLHAGHLTQLMLLFWLQ-----KTGHKPISLMGGGTSIIGDPSFRDESRRM 93
           Y G+D TAS LH G+L  L  L   Q     K  H    L+GG T  IGDPS R   R +
Sbjct: 82  YAGFDPTASGLHVGNLLVLQTLKRFQLAFNPKNVH-IYCLVGGATGRIGDPSGRKTERPL 140

Query: 94  MRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRM 153
           +    I  NIE +K   +SF    + K +  ++NN  WL  +K IDLLR +G +F +  M
Sbjct: 141 LDESTINNNIEGLKREMNSFF---SSKNNVTVVNNADWLGEMKMIDLLRNVGKYFQIANM 197

Query: 154 LSFESVRSRLKREQS----LSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICG 209
           L  +SV+SR++   +    ++F EF+Y + Q+YDF  L  + + RLQ+GGSDQWGNI  G
Sbjct: 198 LRLDSVKSRVENADADNGGMTFTEFSYSLFQSYDFFHLLNSNNVRLQIGGSDQWGNITSG 257

Query: 210 IDLGERLKT--PK-----LFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWR 262
           ++  ++ +T  P+        +T PLLTTA G K GK++  A+WLN EMTS ++F+QY+ 
Sbjct: 258 LEFIKKKQTAMPESCQSVCSGMTIPLLTTADGVKFGKSMGNAVWLNPEMTSVFDFYQYFL 317

Query: 263 NIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIATEITTMVHGREEAEKAA 320
            + DADV    K LT + + +ID++ +   Q  E   A++ +A E+TT +HG+E+ EK  
Sbjct: 318 RVQDADVEKLLKMLTFVSLEDIDQILQEHNQQPEKRIAQQRLAEELTTQIHGKEQLEKVQ 377

Query: 321 TAAMECFDMS 330
                 F  S
Sbjct: 378 KCTNLLFGAS 387


>gi|300122241|emb|CBK22814.2| Tyrosyl-tRNA synthetase [Blastocystis hominis]
          Length = 339

 Score =  209 bits (533), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 119/312 (38%), Positives = 175/312 (56%), Gaps = 11/312 (3%)

Query: 12  LSERGFIHQISNPRE---LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L  RG I+Q S   E     IL +Q +   Y+G D TA  LH GHL    +L      G 
Sbjct: 7   LKNRGLIYQTSQLAEEALKSILPNQSI---YLGVDPTAKGLHIGHLMACRILKRFHDAGT 63

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           K I+L+GG T++IGDPSF+ + R ++ + ++QEN+++I+      +    G  + L +NN
Sbjct: 64  KCIALVGGATALIGDPSFKVKERDILSADDVQENVKEIQNDLKRVLN-SNGDDNLLFVNN 122

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             W  ++  ID LR++G    V  ML+ +SV  R+    SLSF EF Y  LQA DF+ L 
Sbjct: 123 YDWYKNMGVIDFLRDVGKNMRVQSMLAKDSVSKRINSPNSLSFAEFAYQCLQANDFLHLH 182

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
             Y C  Q+GGSDQWGNI  GID  +R     +  +T PLLT + G K GK+   AIW+N
Sbjct: 183 TQYGCVCQIGGSDQWGNITSGIDFVKRKTGDVVHGITVPLLTNSKGQKFGKSEGNAIWIN 242

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINEAKKIIA--T 304
           K  TS ++F+Q++   +DAD+    + LT LP+ +ID +     K  E  EA+ ++A  T
Sbjct: 243 KSRTSNHDFYQFFLRTEDADLPILFRLLTDLPLDQIDALLAEHQKCPEKREAQGVLAGTT 302

Query: 305 EITTMVHGREEA 316
           +   ++  R +A
Sbjct: 303 KSKGIISRRNDA 314


>gi|328872662|gb|EGG21029.1| tyrosine-tRNA ligase [Dictyostelium fasciculatum]
          Length = 487

 Score =  209 bits (533), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 136/447 (30%), Positives = 220/447 (49%), Gaps = 68/447 (15%)

Query: 7   DFLSILSERGFIHQIS-NPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           + +  L  RGFI+Q++ N  E+  L S+ V + Y G+D TA+SLH G+L QLM+L   ++
Sbjct: 41  NVIDTLKSRGFIYQMTANDEEMKKLTSKPV-SLYAGFDPTANSLHIGNLIQLMVLLQFKR 99

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMM-------RSQEIQENIEKIKGIFSSFIKYGT 118
            GH PI+L+GG T++IGDPS +   R  +        S+ I+ENIE I G          
Sbjct: 100 HGHNPIALLGGATALIGDPSGKSTDRPQLDQTFITDNSKIIRENIETILG---------- 149

Query: 119 GKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR------------- 165
              D L+++N  W   I  I   R+IG +F +  ML  + +++R+ +             
Sbjct: 150 --KDNLIVDNYDWNKDISIISFFRDIGKYFRIGSMLRKDFIQNRIGQVMEIPKGNGETTE 207

Query: 166 ----------EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER 215
                        +S  EF Y + Q+ D+V L   ++C +Q+GGSDQWGNI  G DL ++
Sbjct: 208 KCVVLNNTSDSTGISLPEFCYSLFQSNDYVHLHSTHNCVIQIGGSDQWGNITDGCDLIKK 267

Query: 216 LKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKR 275
                   +T PLLT + G K+GK+   +IWL+   TSP+NF+QYW  I D DV      
Sbjct: 268 KLNKTAHGITIPLLTNSQGKKLGKSEGNSIWLSASRTSPFNFFQYWIQIADDDVEKLLNL 327

Query: 276 LTTLPMSEIDRMAKLQGKE--INEAKKIIATEITTMVHGREEAEKAATAAMECF------ 327
            T +P+ EI  + +    E  +  A++++A  +T +VHG +  E+A       F      
Sbjct: 328 FTFIPLQEIKEVMEKHRAEPHLRHAQRVLAEHVTRIVHGDQGVEEAINTTKLLFSEDSLS 387

Query: 328 ------------DMSIHSQHMPTISISKDEVS-RGMGLLTLIVKAGFATSTNEARRHLKS 374
                       D      +   I IS+  +       +  I ++  + S N+ ++ ++S
Sbjct: 388 ILDSYRNDPVRADSLFSKLNFKEIEISQYPIQGEKSATVASIFQSASSASRNQVKQLIES 447

Query: 375 NAIKINNSIISNEKLQIKLQDFDSTGN 401
            +I+IN + ++  +   K+Q  D  GN
Sbjct: 448 KSIQINGTTVTPGQ---KIQQSDLIGN 471


>gi|293363882|ref|ZP_06610618.1| tyrosine--tRNA ligase [Mycoplasma alligatoris A21JP2]
 gi|292552372|gb|EFF41146.1| tyrosine--tRNA ligase [Mycoplasma alligatoris A21JP2]
          Length = 410

 Score =  209 bits (533), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 131/393 (33%), Positives = 217/393 (55%), Gaps = 24/393 (6%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + L  L +RG + Q+SN ++L+ L     V  Y G+D TA SLH G+   ++ L   +K 
Sbjct: 2   NILDDLKQRGILKQVSNEQKLNSLEKNSGV--YSGFDPTAKSLHLGNYIVIINLLRFKKF 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           G KP++++GG T +IGDPSF+D  R ++  + I EN  KIK       K+G       ++
Sbjct: 60  GFKPVAILGGTTGMIGDPSFKDSERVLLDEKTIFENKLKIK---EQLEKFGLE-----VI 111

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           +N  +   +  ID LR IG   +V+ ML+ +SV SR+  E+ LSF EF+Y ++Q YDF +
Sbjct: 112 DNYDFYKDMNVIDFLRNIGKLINVSYMLAKDSVASRI--EKGLSFTEFSYQLIQGYDFYK 169

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERL--KTPKLFALTSPLLTTASGTKMGK-TLSG 243
           L K+ +  +Q GGSDQWGN+  G+++  +    + K  A+T  LLT + G K GK T  G
Sbjct: 170 LYKDNNVFVQCGGSDQWGNLTAGLEIISKNIGDSNKAVAITFNLLTDSEGNKFGKSTGGG 229

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKI 301
           ++WL+KEM SPYN +Q+  N  D++V     +LT L +  I ++    L+  +   A++I
Sbjct: 230 SLWLDKEMNSPYNLYQFLYNQPDSEVEKLLNQLTLLEIDYIKKVINEHLKNTQKRYAQEI 289

Query: 302 IATEITTMVHGREEAEKAATAAMECFD-------MSIHSQHMPTISISKDEVSRGMGLLT 354
           +A ++ + +H + +AE A   +   F+       +SI+  +M    +    V++   L+ 
Sbjct: 290 LAYQVVSDIHSKNDAEHAKLTSQIMFNKTFDFTKISINQLNMVKNQLKIVVVNKNTNLID 349

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNE 387
            ++      S  EAR  + + ++K N + I  E
Sbjct: 350 ELISKKIINSKREAREFISTKSLKWNMTPIDEE 382


>gi|194756246|ref|XP_001960390.1| GF11543 [Drosophila ananassae]
 gi|190621688|gb|EDV37212.1| GF11543 [Drosophila ananassae]
          Length = 464

 Score =  209 bits (533), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 127/403 (31%), Positives = 214/403 (53%), Gaps = 29/403 (7%)

Query: 12  LSERGFIHQI----SNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           L++RGF   I    + PR +  L + GV + Y G+D TA SLH G+L  +M L   Q+ G
Sbjct: 31  LTDRGFFQGIFPDTAAPR-MKQLFTSGVQSIYAGFDPTADSLHVGNLLVIMGLIHCQRAG 89

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI----EKIKGIFSSFIKY--GTGKT 121
           H+PI+L+GG T +IGDPS R   R  +    I+ N+    ++++ +F +  ++   T K 
Sbjct: 90  HQPIALVGGATGLIGDPSGRKTERNQLGESVIETNLKAIEQQLRQVFENHEQFLWDTRKN 149

Query: 122 DALM-----LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNY 176
            + +     +NN  W  +++ ID +  +G  F +  MLS  SV+SRL  E  +SF EF Y
Sbjct: 150 PSPLPPLTIVNNADWYKNLQIIDFVANMGRHFRMGSMLSRSSVQSRLDSEDGMSFTEFTY 209

Query: 177 MILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK-LFALTSPLLTTASGT 235
            I QAYD++ L + ++C  QMGGSDQ GN++ G +L  R++  + +F LT PL+T   G 
Sbjct: 210 QIFQAYDWLHLLRRHNCCFQMGGSDQTGNLMTGHELISRVERKREVFGLTLPLVTNEEGD 269

Query: 236 KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI 295
           K GK+   A+WL+   TSP+  +Q++  + D+ V    +  T +P+ EI+++ +   KE 
Sbjct: 270 KFGKSAGNAVWLDANKTSPFALYQFFLRMADSKVEKLLRLFTFIPLPEIEQLMREHTKEP 329

Query: 296 N--EAKKIIATEITTMVHGR---EEAEKAATA-------AMECFDMSIHSQHMPTISISK 343
              +A+ ++A ++T +VHG     +AE+   A        +   + +   Q     ++  
Sbjct: 330 EKRKAQTLLAEDVTLLVHGESGLRQAERVTNALYKGNVEGLAELNYAEIKQTFQGATVVD 389

Query: 344 DEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISN 386
                GM +L L + A    +  +A R + +    +N   + N
Sbjct: 390 LLTEPGMSVLQLAMNAKCFPTETDAVRIINAGGFYVNQKRVQN 432


>gi|325473316|gb|EGC76511.1| tyrosyl-tRNA synthetase [Treponema denticola F0402]
          Length = 293

 Score =  209 bits (532), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 110/250 (44%), Positives = 150/250 (60%), Gaps = 4/250 (1%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L IL ERGFI Q ++ + L     +G +  Y G D T  SLH GH+  +  L  L + GH
Sbjct: 5   LKILQERGFIQQCTDLKALSDRMDKGQIAFYTGTDPTGPSLHIGHMVPIFALKHLCREGH 64

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           K + L+GGGTS IGDPS + E R+M+   E+ +N   I+     F+       +   +NN
Sbjct: 65  KGVVLVGGGTSRIGDPSGKTEMRKMLSYDELDKNAVSIQNQIEKFLAEDV--ENVRFVNN 122

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
           + WL  + YID LR+IGS FSVN+MLSFE+ + R+  E  LSFLEFNY +LQ+YDF+ L 
Sbjct: 123 KDWLADLNYIDFLRDIGSHFSVNKMLSFEAYKKRM--ETGLSFLEFNYQLLQSYDFLMLN 180

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
           +NY+  LQ+GG DQWGN++ G DL  R    ++FALT PL+T A G K GK   G+  L 
Sbjct: 181 QNYNVELQIGGDDQWGNMVAGSDLIRRKGGGEVFALTFPLVTRADGQKNGKERKGSSLLG 240

Query: 249 KEMTSPYNFW 258
            +      F+
Sbjct: 241 SDPCFSIRFF 250


>gi|302143636|emb|CBI22389.3| unnamed protein product [Vitis vinifera]
          Length = 399

 Score =  209 bits (532), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 138/417 (33%), Positives = 204/417 (48%), Gaps = 73/417 (17%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           +P  +S+ + IL +RG +  I++P  L    S   +  Y G+D TA SLH G+L  L++L
Sbjct: 54  IPLHRSNVIEILEQRGLVDSITSPI-LRASSSTQTLKVYCGFDPTAESLHLGNLLGLIVL 112

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            W ++ GHK ++L+GG T+ IGDPS +   R  +  + +++N   I    +S +   T  
Sbjct: 113 SWFRRCGHKAVALIGGATARIGDPSGKSLERPELNLEALEKNTIGITNTITSILNRSTTN 172

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
                                   G   SV  M++ ESV+ RL+ EQ +S+ EF Y +LQ
Sbjct: 173 ------------------------GGDDSVGTMMAKESVKKRLESEQGMSYTEFTYQLLQ 208

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER-LKTPKLFALTSPLLTTASGTKMGK 239
            YDF+ L +N    +Q GGSDQWGNI  G +L  + L+T   + LT PLL  + GTK GK
Sbjct: 209 GYDFLYLFENEGVSVQFGGSDQWGNITAGTELIRKILQTDGAYGLTFPLLLKSDGTKFGK 268

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAK 299
           +  GAIWL+  M SPY F+QY+ ++ DADVV         P +E     KL  K I    
Sbjct: 269 SEDGAIWLSPAMLSPYKFYQYFFSVPDADVVR--------PGAE----TKLDWKTIEGIA 316

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKA 359
           K                                   +P+ S+S DEV   + LL L +  
Sbjct: 317 K----------------------------------DVPSCSLSYDEV-LNLSLLDLSIST 341

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           G   S + ARR LK   + +NN+ I +E  +I+ +D      + LS GKKN ++  +
Sbjct: 342 GLLESKSAARRLLKQGGLYLNNNRIDSEAKRIEAEDIVDGKVLLLSAGKKNKVVVRI 398


>gi|110004042|emb|CAK98382.1| probable tyrosyl-trna synthetase classIprotein [Spiroplasma citri]
          Length = 421

 Score =  209 bits (532), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 146/426 (34%), Positives = 221/426 (51%), Gaps = 28/426 (6%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVT-AYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           + L  L  RG + Q++N  E  +L +Q +    Y G+D T  SLH GHL Q+MLL   + 
Sbjct: 5   NILEELRWRGLLKQVTN--ETKLLKAQELKKGVYCGFDPTGDSLHVGHLIQIMLLKRFEM 62

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            G +PI+++GGGT +IGDPS +   R ++  + I+ N+E I       I          M
Sbjct: 63  FGFQPITIIGGGTGMIGDPSGKKAERVLLDDKTIKHNVETISQQMHQLI-----GAKIKM 117

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  WL  +  ID LR +G  F+++ +L+ E++ +R+  E  LS+ EF Y +LQAYDF 
Sbjct: 118 VNNAEWLQKMTLIDFLRNVGKDFNISYLLAKENIATRI--EVGLSYTEFAYTLLQAYDFY 175

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGID-LGERLKTPKLF-ALTSPLLTTASGTKMGKTLSG 243
           +L  NYDC +Q GGSDQWGNI  G D + +++    L   LT  LLT A G+K GKT SG
Sbjct: 176 QLYINYDCAVQTGGSDQWGNITSGTDYIYKQIGEDNLACGLTMNLLTKADGSKFGKTESG 235

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKI 301
           A+WL+ + TSPY F+Q++ N DD +     + LT L   +I  +      E  +   +K 
Sbjct: 236 AVWLDSKKTSPYEFYQFFYNQDDQETAKLLRYLTMLSEKKIIALETAHQNEPTQRIVQKK 295

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMG 351
           +A E+T  VH     + A   +   F  S+H             +P   ++    +  + 
Sbjct: 296 LAEEVTLFVHQAAGLKTAQIVSEALFKGSLHELSEQQLEQLHNSLPNFHLT----NFNLP 351

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           LL L+++A   TS  E R  L+  AI IN  II  E   +    F     + +  GK+ +
Sbjct: 352 LLDLLIQAEIVTSKREGREFLEQAAITINGQIIKEETWTLAKDKFLFNKYLIIRRGKRKY 411

Query: 412 IICHLC 417
            + +L 
Sbjct: 412 HLIYLT 417


>gi|125809705|ref|XP_001361216.1| GA14214 [Drosophila pseudoobscura pseudoobscura]
 gi|54636391|gb|EAL25794.1| GA14214 [Drosophila pseudoobscura pseudoobscura]
          Length = 464

 Score =  209 bits (531), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 123/402 (30%), Positives = 210/402 (52%), Gaps = 27/402 (6%)

Query: 12  LSERGFIHQI---SNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L++RGF   I   +   ++  L + G  + Y G+D TA SLH G+L  +M L   Q+ GH
Sbjct: 31  LTDRGFFQGIFPDTAAPKIKQLFTSGQQSIYAGFDPTADSLHVGNLLVIMGLLHCQRAGH 90

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFI-----------KYG 117
           +PI+L+GG T +IGDPS R   R  +    I+ N++ I+   +              K  
Sbjct: 91  RPIALVGGATGLIGDPSGRKTERNQLGESIIESNLKAIEQQLTRVFENHEKCLWDNRKNS 150

Query: 118 TGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYM 177
           T      ++NN  W  ++  ID +  +G  F +  MLS  SV+SRL+ E  +SF EF Y 
Sbjct: 151 TPLQPLTIVNNAEWYANLHLIDFIANMGRHFRMGSMLSRSSVQSRLESEDGMSFTEFTYQ 210

Query: 178 ILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK-LFALTSPLLTTASGTK 236
           I QAYD++ L + ++C  QMGGSDQ GN++ G +L  R++  + +F +T P++T   G K
Sbjct: 211 IFQAYDWLHLLRKHNCCFQMGGSDQTGNLMTGHELISRVERKREVFGMTLPIVTNEEGDK 270

Query: 237 MGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN 296
            GK+   A+WL++  TSP+  +Q++  + D++     K  T +P++EI+++ +   KE  
Sbjct: 271 FGKSAGNAVWLDENKTSPFALYQFFLRMPDSEAEKLLKLFTFIPLTEIEQLMQEHEKEPE 330

Query: 297 --EAKKIIATEITTMVHGR---EEAEKAATA-------AMECFDMSIHSQHMPTISISKD 344
             +A+ ++A ++T +VHG    ++AE+   A        +   + +   Q     ++   
Sbjct: 331 KRKAQTLLAEDVTLLVHGENGLKQAERVTNALYKGKVDGLAELNYAEIKQTFQGAAVVDL 390

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISN 386
               GM +L L +KA    +  +A R + +    +N   + N
Sbjct: 391 LTEPGMSILQLAMKAKCFPTETDAVRIINAGGFYVNQKRVQN 432


>gi|71894632|ref|YP_278740.1| tyrosyl tRNA synthetase [Mycoplasma synoviae 53]
 gi|97201683|sp|Q4A5E2|SYY_MYCS5 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|71851420|gb|AAZ44029.1| tyrosyl tRNA synthetase [Mycoplasma synoviae 53]
          Length = 411

 Score =  208 bits (530), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 138/427 (32%), Positives = 219/427 (51%), Gaps = 40/427 (9%)

Query: 9   LSILSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           L+ L +R  +  ISN  + L +  + GV   Y+G+D TA SLH G+  Q++ L   +K  
Sbjct: 5   LTELRDREILKDISNEEKFLSLPKNSGV---YVGFDPTADSLHLGNYVQIVNLIRFKKHN 61

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
              ++++GG T +IGDPSFR   R ++ ++E+ +N  KIK    SF           + +
Sbjct: 62  WNALAVLGGATGMIGDPSFRSTERVLLSTEELLKNKNKIKSQLESF--------GLKVFD 113

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N      I ++D L+ IG   +V+ ML+ +SV+ RL   Q LSF EF+Y I+Q YDF+ L
Sbjct: 114 NYEIYKDISFLDFLKNIGKLINVSYMLAKDSVKDRLA--QGLSFTEFSYQIIQGYDFLHL 171

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERL--KTPKLFALTSPLLTTASGTKMGKTLSGA- 244
            +N D  +Q GGSDQWGNI  GI++  ++     K  A+T+ LLT ++G K GK+  G  
Sbjct: 172 YQNQDIFVQYGGSDQWGNITTGIEMISKVVGDNHKAIAITANLLTDSNGNKFGKSTGGGN 231

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKII 302
           +WL+ + T P++ +Q+  N  D++V    K LT L +SEI  +     K   +  A+K +
Sbjct: 232 LWLDAQKTKPFDMYQFLINQPDSEVEKLLKWLTFLEISEIKDLVNKHNKNPKDRLAQKAL 291

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMS-------IHSQHMPTISISKDEVSRGMGLLTL 355
           A E+   +HG+  AE     +   F++S       + +       I   EV +G+ L+  
Sbjct: 292 AYEVIKDIHGKSAAENCTFLSEMLFNLSLDLSKVTLENMEFAYNQIESFEVEKGVNLVNF 351

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNI------KLSFGKK 409
           +V+     S   AR  + S ++K N   I         +DF  + N        L  GKK
Sbjct: 352 LVENKILQSKRLAREFIASKSLKFNYEPID--------EDFSVSSNYFEGKYATLHLGKK 403

Query: 410 NHIICHL 416
             +IC +
Sbjct: 404 KILICKV 410


>gi|255715553|ref|XP_002554058.1| KLTH0E13354p [Lachancea thermotolerans]
 gi|238935440|emb|CAR23621.1| KLTH0E13354p [Lachancea thermotolerans]
          Length = 463

 Score =  208 bits (529), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 138/418 (33%), Positives = 209/418 (50%), Gaps = 33/418 (7%)

Query: 7   DFLSILSERGFIHQISNPREL--DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           + L  L +RG + Q+S P  +    L S   +  Y G D TA SLH G+L  LM+L    
Sbjct: 32  NVLQTLRDRGLLAQVSQPENVLRTKLESGEKLKLYCGADPTAESLHLGNLLPLMVLLHFY 91

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFI---------K 115
             GH   +L+GG T I+GDPS R   R  +   + Q N+  I+G    F          +
Sbjct: 92  IKGHDVYTLVGGATGIVGDPSGRKTERTAIEETKRQSNVSNIQGQLQRFFENGLAYYKGR 151

Query: 116 YG-TGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEF 174
           YG      A+  NN  W   +K +D L   G    V  MLS +SV SRL  +  + F EF
Sbjct: 152 YGHVSNGKAVHTNNYDWWHDMKMLDFLGRYGRHIRVQSMLSRDSVSSRLGSQDGIGFNEF 211

Query: 175 NYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT-PKLFALTSPLLTTAS 233
            Y ILQAYDF  L + +   +Q+GG+DQWGNI  GIDL  R+ +  + F LT PLLTT++
Sbjct: 212 TYQILQAYDFYHLNQIHGVAVQVGGNDQWGNITAGIDLISRIGSKSQPFGLTVPLLTTST 271

Query: 234 GTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQ 291
           G K GK+   A++++  M + ++ +Q++ +  D DV    +  T LP+ EI+ + +  ++
Sbjct: 272 GEKFGKSAGNAVFIDPTMNTSFDMYQFFMHTTDEDVAKLLRIFTLLPLQEINAVVQTHME 331

Query: 292 GKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISI------SKDE 345
             +   A+K++  E+  +VHG      A   +   F    H   +P   +      ++  
Sbjct: 332 SPKDRIAQKLLGREVVDLVHGSGRGNDAEMVSEILF--GNHQLQLPANELIRLFREARHL 389

Query: 346 VS--RGMGLLTLIVKAGFATSTNEARRHLKSNAI-------KINNSIISNEKLQIKLQ 394
           VS  RG+ L  L+V+     S +EARR LK  ++       ++ N I S E+  I  Q
Sbjct: 390 VSFPRGLSLEELLVRVT-GCSRSEARRKLKQGSVYLGSDKTRVLNDIESLEQFYIDDQ 446


>gi|284931537|gb|ADC31475.1| tyrosyl-tRNA synthetase [Mycoplasma gallisepticum str. F]
          Length = 415

 Score =  208 bits (529), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 133/422 (31%), Positives = 221/422 (52%), Gaps = 26/422 (6%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           DF+S L +R  I QISN  +L  L  +     Y+G+D +  SLH G+L  +++L +L+K 
Sbjct: 2   DFISELKKRNIIKQISNEEKL-ALALKNQKGVYVGFDPSGESLHLGNLIPIIVLRYLKKV 60

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           G K  +++GG T +IGDPS +   R++   ++I  N  KIK     +       T A ++
Sbjct: 61  GFKTYAILGGATGLIGDPSGKTSERKVQDYEKITANANKIKVQLERY-------TQAKII 113

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  +  ++  ++ LR+ G   ++  +L  E +RSR+  E  +S+ EF+Y I+Q +DF+ 
Sbjct: 114 NNIDFYQNMNLLNFLRDTGKLINIGYLLDKEFIRSRI--ENGISYAEFSYNIIQGHDFLH 171

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERL----KTPKLFALTSPLLTTASGTKMGKTLS 242
           L + YD ++Q GGSDQWGNI  GIDL +R     KTP L  LT  LL   +G K GK+  
Sbjct: 172 LYEQYDVQVQCGGSDQWGNITTGIDLIKRKYGEEKTPYLCGLTFNLLLNPNGNKFGKSEQ 231

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKR-LTTLPMSEIDRM--AKLQGKEINEAK 299
           GA++L++ +T PY  WQY  N DD  ++    R +    + ++  +  A L  K+   A+
Sbjct: 232 GALYLDENLTHPYLIWQYIYNQDDQFIIDLIHRYVLDQSLEQLQELIEAHLANKKTRIAQ 291

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFD-----MSIHSQHMPTISISKDEVSRGMGLLT 354
           K +A  +   +H +E  +         FD     +S   + +   S  K E+ R    + 
Sbjct: 292 KFLADYLVKFIHSQEHLDTVHKMNKALFDNQLDQLSDQEKLVVFASFDKVELDRNQSFMV 351

Query: 355 L--IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           +  +++A  A S    R  +   +I+I++  I++ + Q+ ++       IK   GKKN+ 
Sbjct: 352 IDFLLQAKVADSKRILRELIAQGSIQIDDLKITDPQAQLNVRKDQQLTVIKK--GKKNYF 409

Query: 413 IC 414
           I 
Sbjct: 410 IV 411


>gi|320164665|gb|EFW41564.1| tyrosyl-tRNA synthetase [Capsaspora owczarzaki ATCC 30864]
          Length = 500

 Score =  207 bits (528), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 134/454 (29%), Positives = 232/454 (51%), Gaps = 64/454 (14%)

Query: 9   LSILSERGFIHQISNPRE--LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           L+ L  RG +H  ++  E     L S      Y G+D TA SLHAG+L  LM +    + 
Sbjct: 50  LTELQWRGLLHAHTSSFEGLAATLRSPNRACLYAGFDPTADSLHAGNLLVLMGMLHFHRA 109

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+ I+L+GG T  +GDPS R   R M+    +  N     G  +S  K  T      ++
Sbjct: 110 GHQVIALVGGATGQVGDPSGRQTERSMLAVNTVASNA---AGSPTSSPKPVT------VV 160

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQS---------LSFLEFNYM 177
           NN  W   +  ++ +R++G  F +  ML  ESV+SRL+ + +         +SF EF Y 
Sbjct: 161 NNLDWYAPMNVLEFVRDVGQHFRMTTMLGKESVKSRLQPQSTSASGTEPAGMSFTEFTYQ 220

Query: 178 ILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
           + QAYD+ +L +   CRLQ+GGSDQWGNI  G DL  ++   +   +T PL+TT++G K 
Sbjct: 221 LFQAYDYYQLHERNQCRLQLGGSDQWGNITAGCDLIRKVTGKEAHGVTMPLVTTSTGEKF 280

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE 297
           GK++  A+W++   T+P+ ++Q++   +D+    + +  T L + EI  +A+   +  N+
Sbjct: 281 GKSMGNAVWMDAAKTTPFEWYQFFLRSEDSQAERYLRYYTFLSLDEITDIARRHAEAPNK 340

Query: 298 --AKKIIATEITTMVHGRE---EAEK-------------------------AATAAMECF 327
             A+  +A ++T +VHGRE   EA +                         A  ++   F
Sbjct: 341 RIAQTALADQVTLLVHGREGLAEAHRSTKLLYHRGGSGSGSPNSTNSNEVQATDSSNSPF 400

Query: 328 DM------SIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINN 381
           ++      ++ S   P+I++S+ E+ + + L+  +V+ G   S +EA++ +++  + +N+
Sbjct: 401 ELTSAEVAALLSAQTPSINVSRSELGQ-LLLIDALVRLGLTPSKSEAKKLIRNGGVSVNS 459

Query: 382 SIISNEKLQI----KLQDFDSTGNIKLSFGKKNH 411
               NE+  +     L+D ++T    L  GK+ H
Sbjct: 460 VKSVNERDVLGENHALKDSNAT---LLRVGKRAH 490


>gi|55667251|ref|XP_528727.1| PREDICTED: tyrosyl-tRNA synthetase, mitochondrial isoform 2 [Pan
           troglodytes]
          Length = 477

 Score =  207 bits (528), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 137/421 (32%), Positives = 209/421 (49%), Gaps = 24/421 (5%)

Query: 17  FIHQISNPRELDILCSQGVV----TAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPIS 72
           F  +     EL  L  +G      T Y G+D TA SLH GHL  L+ LF LQ+ GH  I+
Sbjct: 51  FFPETGTKIELPELFDRGTASFPQTIYCGFDPTADSLHVGHLLALLGLFHLQRAGHNVIA 110

Query: 73  LMGGGTSIIGDPSFRDESRRMMRSQEIQEN-------IEKIKGIFSSFIKYGTGKTDALM 125
           L+GG T+ +GDPS R + R  + ++ ++ N       +E +          G       +
Sbjct: 111 LVGGATARLGDPSGRTKEREALETERVRANARALRLGLEALAANHQQLFTDGRSWGSFTV 170

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           L+N  W    + +D L  +G  F +  +LS +SV+ RLK  + +S  EF Y +LQAYDF 
Sbjct: 171 LDNSAWYQKQRLVDFLAAVGGHFRMGTLLSRQSVQLRLKSPEGMSLAEFFYQVLQAYDFY 230

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L + Y CR+Q+GGSDQ GNI+ G +   +L    +F +T PL+T+ +G K+GK+   A+
Sbjct: 231 YLFQRYGCRVQLGGSDQLGNIMSGYEFINKLTGEDVFGITVPLITSTTGAKLGKSAGNAV 290

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIA 303
           WLN++ TSP+  +Q++    D  V  + K  T LP+ EID + +L  KE      +K +A
Sbjct: 291 WLNRDKTSPFELYQFFVRQPDDSVERYLKLFTFLPLPEIDHIMQLHVKEPERRGPQKRLA 350

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTI----SISKDEVSRGMGLL 353
            E+T +VHGRE  + A       +  SI +      Q +  +      S+  +  G  +L
Sbjct: 351 AEVTKLVHGREGLDSAKRCTQALYHSSIDALEVMSDQELKELFKEAPFSEFFLDPGTSVL 410

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISN-EKLQIKLQDFDSTGNIKLSFGKKNHI 412
               KA          R +    + IN+  ++N E + I  Q     G   L  GK+N  
Sbjct: 411 DTCRKANAIPDGPRGYRMITEGGVSINHQQVTNPESVLIVGQHILKNGLSLLKIGKRNFY 470

Query: 413 I 413
           I
Sbjct: 471 I 471


>gi|90083124|dbj|BAE90644.1| unnamed protein product [Macaca fascicularis]
          Length = 477

 Score =  207 bits (527), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 137/423 (32%), Positives = 210/423 (49%), Gaps = 24/423 (5%)

Query: 15  RGFIHQISNPRELDILCSQGVV----TAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           + F  +     EL  L  +G      T Y G+D TA SLH GHL  L+ LF LQ+ GH  
Sbjct: 49  KNFFPETGTKIELPELFDRGTASFPQTIYCGFDPTADSLHVGHLLALLGLFHLQRAGHNV 108

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN-------IEKIKGIFSSFIKYGTGKTDA 123
           I+L+GG T+ +GDPS R + R  + ++ ++ N       +E +          G      
Sbjct: 109 IALVGGATARLGDPSGRTKEREALETERVRANARALRLGLEALAANHQQLFTDGRSWGSF 168

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            +L+N  W      +D L  +G  F +  +LS +SV+ RLK  + +S  EF Y +LQAYD
Sbjct: 169 TVLDNSAWYQKQHLVDFLAAVGGHFRMGTLLSRQSVQLRLKSAEGMSLAEFFYQVLQAYD 228

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F  L + Y CR+Q+GGSDQ GNI+ G +   +L    +F +T PL+T+ +G K+GK+   
Sbjct: 229 FYYLFQRYGCRVQLGGSDQLGNIMSGYEFINKLTGEDVFGITVPLITSTTGAKLGKSAGN 288

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKI 301
           A+WLN++ TSP+  +Q++    D  V  + K  T LP+ EID + +L  KE     A+K 
Sbjct: 289 AVWLNRDKTSPFELYQFFVRQPDDSVERYLKLFTFLPLPEIDHIMQLHVKEPERRGAQKR 348

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTI----SISKDEVSRGMG 351
           +A E+T +VHGRE  + A       +  SI +      Q +  +      S+  +  G  
Sbjct: 349 LAAEVTKLVHGREGLDSAKRCTQALYHSSIDALEVMSDQELKELFKEAPFSELFLDPGTS 408

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISN-EKLQIKLQDFDSTGNIKLSFGKKN 410
           +L    KA          R +    + IN+  ++N E + +  Q     G   L  GK+N
Sbjct: 409 VLDTCRKANAIPDGPRGYRMITEGGVSINHRQVTNPESVLVVGQHILKNGLSLLKIGKRN 468

Query: 411 HII 413
             I
Sbjct: 469 FYI 471


>gi|296211473|ref|XP_002752425.1| PREDICTED: tyrosyl-tRNA synthetase, mitochondrial [Callithrix
           jacchus]
          Length = 477

 Score =  207 bits (527), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 139/426 (32%), Positives = 208/426 (48%), Gaps = 22/426 (5%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           F     ERG   +I  P   +   +    T Y G+D TA SLH GHL  L+ LF LQ+ G
Sbjct: 48  FKDFFPERG--TKIELPELFNRGTASFPQTIYCGFDPTADSLHVGHLLALLGLFHLQRAG 105

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN-------IEKIKGIFSSFIKYGTGK 120
           H  I+L+GG T+ +GDPS R + R  +  + +Q N       +E +          G   
Sbjct: 106 HNVIALVGGATARLGDPSGRTKEREALEKESVQANARALRLELEALAANHQQLFSDGRPW 165

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +L+N  W      +D L  +G  F +  +LS +SV+ RLK  + +S  EF Y +LQ
Sbjct: 166 GSFTVLDNSAWYQKQHLVDFLAAVGGHFRMGTLLSRQSVQMRLKSPEGMSLAEFFYQVLQ 225

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDF  L + Y CR+Q+GGSDQ GNI+ G +   +L    +F +T PL+T+ +G K+GK+
Sbjct: 226 AYDFYYLFQRYGCRVQLGGSDQLGNIMSGYEFIHKLTGEDVFGITVPLITSTTGAKLGKS 285

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--A 298
              A+WLN++ TSP+  +Q++    D  V  + K  T LP+ EID +  L  KE      
Sbjct: 286 AGNAVWLNRDKTSPFELYQFFVRQPDDSVERYLKLFTFLPLPEIDHIMHLHVKEPERRGP 345

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTI----SISKDEVSR 348
           +K +A E+T +VHGRE  + A       +  SI +      Q +  +      S+  +  
Sbjct: 346 QKRLAAEVTKLVHGREGLDSAKRCTQALYHSSIDALEDMSDQELKELFKEAPFSELVLDP 405

Query: 349 GMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISN-EKLQIKLQDFDSTGNIKLSFG 407
           G  +L    KA          R +    + IN+  ++N E + I  Q     G   L  G
Sbjct: 406 GTSVLDTCRKANAIPDGPRGYRMITEGGVSINHQQVTNPESVLIVGQHILKNGLSLLKIG 465

Query: 408 KKNHII 413
           K+N  I
Sbjct: 466 KRNFYI 471


>gi|294660357|ref|NP_853071.2| tyrosyl-tRNA synthetase [Mycoplasma gallisepticum str. R(low)]
 gi|298286870|sp|Q7NBH9|SYY_MYCGA RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|284812014|gb|AAP56639.2| tyrosyl-tRNA synthetase [Mycoplasma gallisepticum str. R(low)]
 gi|284930549|gb|ADC30488.1| tyrosyl-tRNA synthetase [Mycoplasma gallisepticum str. R(high)]
          Length = 415

 Score =  207 bits (527), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 132/422 (31%), Positives = 221/422 (52%), Gaps = 26/422 (6%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           DF+S L +R  I QISN  +L  L  +     Y+G+D +  SLH G+L  +++L +L+K 
Sbjct: 2   DFISELKKRNIIKQISNEEKL-ALALKNQKGVYVGFDPSGESLHLGNLIPIIVLRYLKKV 60

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           G K  +++GG T +IGDPS +   R++   ++I  N  KIK     +       T A ++
Sbjct: 61  GFKTYAILGGATGLIGDPSGKTSERKVQDYEKITANANKIKVQLERY-------TQAKII 113

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  +  ++  ++ LR+ G   ++  +L  E +RSR+  E  +S+ EF+Y I+Q +DF+ 
Sbjct: 114 NNIDFYQNMNLLNFLRDTGKLINIGYLLDKEFIRSRI--ENGISYAEFSYNIIQGHDFLH 171

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERL----KTPKLFALTSPLLTTASGTKMGKTLS 242
           L + YD ++Q GGSDQWGNI  GID+ +R     KTP L  LT  LL   +G K GK+  
Sbjct: 172 LYEQYDVQVQCGGSDQWGNITTGIDMIKRKYGEEKTPYLCGLTFNLLLNPNGNKFGKSEQ 231

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKR-LTTLPMSEIDRM--AKLQGKEINEAK 299
           GA++L++ +T PY  WQY  N DD  ++    R +    + ++  +  A L  K+   A+
Sbjct: 232 GALYLDENLTHPYLIWQYIYNQDDQFIIDLIHRYVLDQSLEQLQELIEAHLANKKTRIAQ 291

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFD-----MSIHSQHMPTISISKDEVSRGMGLLT 354
           K +A  +   +H +E  +         FD     +S   + +   S  K E+ R    + 
Sbjct: 292 KFLADYLVKFIHSQEHLDTVHKMNKALFDNQLDQLSDQEKLVVFASFDKVELDRNQSFMV 351

Query: 355 L--IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           +  +++A  A S    R  +   +I+I++  I++ + Q+ ++       IK   GKKN+ 
Sbjct: 352 IDFLLQAKVADSKRILRELIAQGSIQIDDLKITDPQAQLNVRKDQQLTVIKK--GKKNYF 409

Query: 413 IC 414
           I 
Sbjct: 410 IV 411


>gi|254584550|ref|XP_002497843.1| ZYRO0F14784p [Zygosaccharomyces rouxii]
 gi|238940736|emb|CAR28910.1| ZYRO0F14784p [Zygosaccharomyces rouxii]
          Length = 458

 Score =  206 bits (525), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 131/410 (31%), Positives = 209/410 (50%), Gaps = 42/410 (10%)

Query: 8   FLSILSERGFIHQISNPRE-LDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
            L  L  RG I Q++ P + L    SQG  +  Y G D TA SLH G++  LM+L     
Sbjct: 20  LLEDLKLRGLIAQVAQPEQWLHEKLSQGHKIKLYCGADPTAKSLHLGNVVPLMILLNFYV 79

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG-------- 117
            GH   +L+GG T  +GDPS R   R+ M      +N+++I+  F+ F + G        
Sbjct: 80  KGHDVFALVGGATGRVGDPSGRTTERQGMSDDSRLDNVDRIQQQFTRFFENGWKYYESRF 139

Query: 118 -----TGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFL 172
                 G    + ++N  W   IK +D L + G    V  M S  S+ SR++ +  L F 
Sbjct: 140 PQISARGPGRLVKVDNYHWWKDIKLLDFLAQYGRHIRVQSMFSRSSIASRIEGKDGLGFN 199

Query: 173 EFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL---KTPKLF--ALTSP 227
           EF Y +LQAYDF  L K +   LQ+GG+DQWGNI  GID  +R+    + KL    +T+P
Sbjct: 200 EFTYQVLQAYDFYHLYKTHGVSLQVGGNDQWGNITAGIDFIDRVVSSSSDKLSPGGITAP 259

Query: 228 LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM 287
           LL+T++G K GK+   AI+L+ ++ + Y+ +Q++ N  DADV  F K  T LP+  I  +
Sbjct: 260 LLSTSTGEKFGKSAGNAIFLDPQINTAYDIFQFFYNTKDADVCRFLKIFTLLPLETISTV 319

Query: 288 AK--LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDE 345
            +  ++   + + ++ +A E+T ++ G    E+++  +   F       H+   ++S DE
Sbjct: 320 VQDHMEQPHLRKGQRFLAKEVTDLLFGVGSGERSSKVSEVLFG------HVSEANMSADE 373

Query: 346 -------------VSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNS 382
                        V RG  L+ +I +     S +EARR L   ++ +++S
Sbjct: 374 LIKLFSEAKILQKVPRGQSLVDIITQVA-PCSKSEARRKLSQGSVLLHSS 422


>gi|94681057|ref|NP_001035526.1| tyrosyl-tRNA synthetase, mitochondrial precursor [Homo sapiens]
 gi|50401709|sp|Q9Y2Z4|SYYM_HUMAN RecName: Full=Tyrosyl-tRNA synthetase, mitochondrial; AltName:
           Full=Tyrosine--tRNA ligase; Short=TyrRS; Flags:
           Precursor
 gi|10436334|dbj|BAB14806.1| unnamed protein product [Homo sapiens]
 gi|15990482|gb|AAH15625.1| Tyrosyl-tRNA synthetase 2, mitochondrial [Homo sapiens]
 gi|119608923|gb|EAW88517.1| tyrosyl-tRNA synthetase 2 (mitochondrial), isoform CRA_a [Homo
           sapiens]
 gi|119608924|gb|EAW88518.1| tyrosyl-tRNA synthetase 2 (mitochondrial), isoform CRA_a [Homo
           sapiens]
 gi|123992774|gb|ABM83989.1| tyrosyl-tRNA synthetase 2 (mitochondrial) [synthetic construct]
 gi|123999518|gb|ABM87314.1| tyrosyl-tRNA synthetase 2 (mitochondrial) [synthetic construct]
          Length = 477

 Score =  206 bits (525), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 137/423 (32%), Positives = 209/423 (49%), Gaps = 24/423 (5%)

Query: 15  RGFIHQISNPRELDILCSQGVV----TAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           + F  +     EL  L  +G      T Y G+D TA SLH GHL  L+ LF LQ+ GH  
Sbjct: 49  KDFFPETGTKIELPELFDRGTASFPQTIYCGFDPTADSLHVGHLLALLGLFHLQRAGHNV 108

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN-------IEKIKGIFSSFIKYGTGKTDA 123
           I+L+GG T+ +GDPS R + R  + ++ ++ N       +E +          G      
Sbjct: 109 IALVGGATARLGDPSGRTKEREALETERVRANARALRLGLEALAANHQQLFTDGRSWGSF 168

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            +L+N  W      +D L  +G  F +  +LS +SV+ RLK  + +S  EF Y +LQAYD
Sbjct: 169 TVLDNSAWYQKQHLVDFLAAVGGHFRMGTLLSRQSVQLRLKSPEGMSLAEFFYQVLQAYD 228

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F  L + Y CR+Q+GGSDQ GNI+ G +   +L    +F +T PL+T+ +G K+GK+   
Sbjct: 229 FYYLFQRYGCRVQLGGSDQLGNIMSGYEFINKLTGEDVFGITVPLITSTTGAKLGKSAGN 288

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKI 301
           A+WLN++ TSP+  +Q++    D  V  + K  T LP+ EID + +L  KE      +K 
Sbjct: 289 AVWLNRDKTSPFELYQFFVRQPDDSVERYLKLFTFLPLPEIDHIMQLHVKEPERRGPQKR 348

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTI----SISKDEVSRGMG 351
           +A E+T +VHGRE  + A       +  SI +      Q +  +      S+  +  G  
Sbjct: 349 LAAEVTKLVHGREGLDSAKRCTQALYHSSIDALEVMSDQELKELFKEAPFSEFFLDPGTS 408

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISN-EKLQIKLQDFDSTGNIKLSFGKKN 410
           +L    KA          R +    + IN+  ++N E + I  Q     G   L  GK+N
Sbjct: 409 VLDTCRKANAIPDGPRGYRMITEGGVSINHQQVTNPESVLIVGQHILKNGLSLLKIGKRN 468

Query: 411 HII 413
             I
Sbjct: 469 FYI 471


>gi|313814308|gb|EFS52022.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL025PA1]
          Length = 344

 Score =  206 bits (524), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 119/327 (36%), Positives = 181/327 (55%), Gaps = 15/327 (4%)

Query: 80  IIGDPSFRDESRRMMRSQEI-QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYI 138
           +IGDP  R  + R ++++E+  E +E IK   S F+ + +G     M+NN  W   +  I
Sbjct: 1   MIGDP--RPTAERTLKTKELTAEYVESIKTQISPFLDF-SGSNPVTMVNNLDWFGDMTAI 57

Query: 139 DLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMG 198
           D LR++G  F VN+ML  +SV  R+  EQ +SF EF+Y ILQ YD++ L + Y C LQ G
Sbjct: 58  DFLRDLGKHFRVNQMLKKDSVSVRMTSEQGISFTEFSYQILQGYDYLYLHRKYGCSLQTG 117

Query: 199 GSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFW 258
             DQWGNI  G DL  RL    +  LT+PL+TTA+G K GK+   AIWL+  + SPY F+
Sbjct: 118 ALDQWGNIAVGADLIRRLDGDIVHGLTTPLITTANGEKFGKSEGNAIWLDSTLCSPYKFY 177

Query: 259 QYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATEITTMVHGREEA 316
           Q+W N DD+ + ++ +  T +   EI+ +     +E ++  A+  +A  +T  VHG  E 
Sbjct: 178 QFWLNSDDSVIGNYLRVFTEISREEIEDLEDSTIREPHKRRAQVALAKYMTQFVHGDSEL 237

Query: 317 EKA--------ATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
           + A         TA       +  SQ   T+  +K + + G  L   +VK G A S NEA
Sbjct: 238 QTALAVSAAVFGTADPRGLSPAAVSQMADTLPSAKLDTT-GYDLAPNLVKVGLAKSNNEA 296

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQD 395
           RR +  NAI +N   + +   +++++D
Sbjct: 297 RRLIGDNAITVNGIGVKDPYAKLEMRD 323


>gi|297691534|ref|XP_002823137.1| PREDICTED: tyrosyl-tRNA synthetase, mitochondrial-like [Pongo
           abelii]
          Length = 477

 Score =  206 bits (524), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 137/428 (32%), Positives = 209/428 (48%), Gaps = 34/428 (7%)

Query: 15  RGFIHQISNPRELDILCSQGVV----TAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           + F  +     EL  L  +G      T Y G+D TA SLH GHL  L+ LF LQ+ GH  
Sbjct: 49  KDFFPETGTKIELPELFDRGTASFPQTIYCGFDPTADSLHVGHLLALLGLFHLQRAGHNV 108

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN-------IEKIKGIFSSFIKYGTGKTDA 123
           I+L+GG T+ +GDPS R + R  + ++ ++ N       +E +          G      
Sbjct: 109 IALVGGATARLGDPSGRTKEREALETERVRVNARALRLGLEALAANHQQLFTDGRSWGSF 168

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            +L+N  W      +D L  +G  F +  +LS +SV+ RLK  + +S  EF Y +LQAYD
Sbjct: 169 TVLDNSAWYQKQHLVDFLAAVGGHFRMGTLLSRQSVQLRLKSPEGMSLAEFFYQVLQAYD 228

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F  L ++Y CR+Q+GGSDQ GNI+ G +   +L    +F +T PL+T+ +G K+GK+   
Sbjct: 229 FYYLFQHYGCRVQLGGSDQLGNIMSGYEFINKLTGEDVFGITVPLITSTTGAKLGKSAGN 288

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKI 301
           A+WLN++ TSP+  +Q++    D  V  + K  T LP+ EID + +L  KE      +K 
Sbjct: 289 AVWLNRDKTSPFELYQFFVRQPDDSVERYLKLFTFLPLPEIDHIMQLHVKEPERRGPQKR 348

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDE---------------V 346
           +A E+T +VHGRE  + A       +  SI +     + +  DE               +
Sbjct: 349 LAAEVTKLVHGREGLDSAKRCTQALYHSSIDA-----LEVMSDEELKELFKEAPFSEFFL 403

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISN-EKLQIKLQDFDSTGNIKLS 405
             G  +L    KA          R +    + IN+  ++N E + I  Q     G   L 
Sbjct: 404 DPGTNVLDTCRKANAIPDGPRGYRMITEGGVSINHQQVTNPESVLIVGQHILKNGLSLLK 463

Query: 406 FGKKNHII 413
            GK+N  I
Sbjct: 464 IGKRNFYI 471


>gi|289724829|gb|ADD18356.1| tyrosyl-tRNA synthetase [Glossina morsitans morsitans]
          Length = 446

 Score =  206 bits (524), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 119/333 (35%), Positives = 188/333 (56%), Gaps = 22/333 (6%)

Query: 11  ILSERGFIHQI----SNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +L+ER F   +    + P ++  +      T Y G+D TA SLH G+L  +M L   Q+ 
Sbjct: 11  LLTERDFFQDLFPDTARP-QITKIFENSSQTIYAGFDPTAESLHVGNLLVIMGLLHFQRA 69

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKG----IF---SSFI----K 115
           GH PI+L+GG T++IGDPS R   R  ++   +Q N+E IK     IF    +F+    +
Sbjct: 70  GHHPIALLGGATALIGDPSHRKTERSQLKKSLVQRNLEAIKHQLMRIFENHQNFLWDDKR 129

Query: 116 YGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFN 175
           +        ++NN  W  ++  ID + + G  F + +MLS  SV+SRL+ E  +SF EF 
Sbjct: 130 HQRPLPQLRIVNNAEWYENLNIIDFISQNGRHFRLGQMLSRTSVQSRLEAEGGMSFAEFT 189

Query: 176 YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLLTTASG 234
           Y   QAYD++ L +NY+CR Q+GGSDQ GN++ G +L  R +   ++F LT P++T   G
Sbjct: 190 YQAFQAYDWLHLLRNYNCRFQLGGSDQMGNLMSGHELISRTEAKTEVFGLTLPIITNEEG 249

Query: 235 TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE 294
            K GK+   A+WL++E TS +  +Q++    DA+V    K  T L + EI+++     KE
Sbjct: 250 DKFGKSGGTAVWLDQEKTSAFALYQFFIRRPDAEVEKLLKLFTFLSLPEIEKLMSEHRKE 309

Query: 295 IN--EAKKIIATEITTMVHGR---EEAEKAATA 322
               +A+ I+A ++T +VHG    ++AE+   A
Sbjct: 310 PEKRKAQTILAEDVTLLVHGENGLKQAERITNA 342


>gi|328788186|ref|XP_624409.2| PREDICTED: probable tyrosyl-tRNA synthetase, mitochondrial-like
           isoform 1 [Apis mellifera]
          Length = 441

 Score =  206 bits (523), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 131/398 (32%), Positives = 208/398 (52%), Gaps = 21/398 (5%)

Query: 39  YIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQE 98
           Y G+D TA SLH G+L  L+ L   Q+ GH+ I L+GG T +IGDPS+R + R  +    
Sbjct: 42  YAGFDPTAESLHIGNLLILINLLHWQRCGHEVIILLGGATGLIGDPSYRKKERVEIDQII 101

Query: 99  IQENIE----KIKGIFSSFIKYGTGKTDALM----LNNETWLCSIKYIDLLREIGSFFSV 150
           ++EN+E     IK I  +  +Y     + L+    LNN  W   +  +  ++++G +F +
Sbjct: 102 LKENLECIRNDIKTIIRNHTQYFCKNHNHLIPIKILNNLQWYKDMNLLSFIKDVGKYFRM 161

Query: 151 NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGI 210
             ML   SVR+RL+ +  +SF EF Y I Q YD++ L + Y+C  Q+GG DQ GNII G 
Sbjct: 162 GTMLGRTSVRARLESDNGMSFTEFTYPIFQGYDWLHLQRTYNCNFQVGGQDQMGNIISGY 221

Query: 211 DLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVV 270
           DL  +    +++ LT PL+T   G K GK+   AIWL+   +S +  +QY+  ++DADV 
Sbjct: 222 DLVTKYTKNQVYGLTLPLITAEGGKKFGKSTGNAIWLSPAKSSSFQLYQYFMRVEDADVE 281

Query: 271 SFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFD 328
            F    T LP+ +I ++ +   +  E+  A++ +A ++T +VHG      A  A+   +D
Sbjct: 282 KFLHFFTFLPLVKIKKIIEEHFKKPELRIAQRNLAEKVTILVHGEAGLIAAKRASAILYD 341

Query: 329 MSIHS----------QHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIK 378
            SI S          Q +   ++ +     G+ +  L +KA    S  +ARR +++    
Sbjct: 342 KSIDSLAKMNANELVQILEGANLIELLSEPGINVYELAMKANCFKSDYDARRIIEAGGFY 401

Query: 379 INNSIISNEKLQIKLQDFDSTGNIK-LSFGKKNHIICH 415
           IN   I+N +  +         NI  L  GKK + I H
Sbjct: 402 INYQKITNMEEVVVPGIHILNNNISLLRVGKKTYHIVH 439


>gi|302306768|ref|NP_983140.2| ABR192Wp [Ashbya gossypii ATCC 10895]
 gi|299788677|gb|AAS50964.2| ABR192Wp [Ashbya gossypii ATCC 10895]
          Length = 461

 Score =  205 bits (522), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 135/400 (33%), Positives = 192/400 (48%), Gaps = 33/400 (8%)

Query: 9   LSILSERGFIHQISNPRELDILCSQ----GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           L  L  RG + QIS P  +D L  Q         Y G D TASSLH G+L  LM+L    
Sbjct: 29  LDELRARGLVQQISEP--VDALVQQLREGKRPRLYCGADPTASSLHLGNLMPLMVLLHCY 86

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG------- 117
             GH  ++L+GG T ++GDPS R   R  +      EN+ +I G F  F + G       
Sbjct: 87  VRGHDVVALIGGATGMVGDPSGRSTERTALADATRLENVRRISGQFKRFFENGREYHGSR 146

Query: 118 ---TGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEF 174
                   A+++NN  W   +  +D L   G    V  ML  +SV +RL     + F EF
Sbjct: 147 VAPAQSGHAVVVNNVEWWKDMGLLDFLARYGRHIRVQNMLGRDSVSARLSSGSGMGFNEF 206

Query: 175 NYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK----TPKLFALTSPLLT 230
           +Y ILQAYDF  L  ++   +Q+GG DQWGNI  GIDL  RL         F +T PLL 
Sbjct: 207 SYQILQAYDFYHLHTHHGVAIQVGGGDQWGNITAGIDLIGRLSPGAAANPAFGVTVPLLL 266

Query: 231 TASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MA 288
           TASG K GK+   A++++  +T  Y  +Q++ N  DADV  F +  T LP+S ID    A
Sbjct: 267 TASGAKFGKSAGNAVFVDPVITPSYQLYQFFVNTSDADVARFLRLFTMLPLSAIDEAVAA 326

Query: 289 KLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISK----- 343
                +   A++++A E+  ++HG    + A T +   F  +     +P   + +     
Sbjct: 327 HTVAPQRRLAQRLLAREVVDLLHGLGHGKDAETVSDVLFGGA--RVDLPAGELLRLFTDA 384

Query: 344 ---DEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKIN 380
               E  R   L+ L+  A   +S  EARR L   A+ + 
Sbjct: 385 GILREAPRSASLVDLMCLA-TGSSRAEARRKLVQGAVYLG 423


>gi|269115037|ref|YP_003302800.1| Tyrosyl-tRNA synthetase [Mycoplasma hominis]
 gi|268322662|emb|CAX37397.1| Tyrosyl-tRNA synthetase [Mycoplasma hominis ATCC 23114]
          Length = 411

 Score =  205 bits (521), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 138/425 (32%), Positives = 223/425 (52%), Gaps = 35/425 (8%)

Query: 5   KSDFLSILSERGFIHQISNPRELD-ILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           + + L  L  RG ++ IS+  + + I    GV   Y G+D TA SLH G+  Q++ L   
Sbjct: 2   QKNILDDLKSRGVLNNISSEEKFNNISLGTGV---YTGFDPTAKSLHLGNYLQILSLLRF 58

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           +K G+KPI+++GG T +IGDPSFR+  R+ +  + + +N   IK   +   K+G    D 
Sbjct: 59  KKAGYKPIAILGGITGMIGDPSFRNSERKFLDQETLLQNKNAIK---NQLQKFGLEVIDN 115

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           L    + W      +D LR IG   +VN +L  +S+ +RL     L+F EF+Y +LQ +D
Sbjct: 116 LDF-YKHWTV----VDFLRNIGKLINVNYLLEKDSITTRLA--NGLTFTEFSYTLLQGWD 168

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERL--KTPKLFALTSPLLTTASGTKMGK-T 240
           F  L +N++ ++QMGGSDQWGNI  G+++  +L  ++    A+T  LL   +G K GK T
Sbjct: 169 FKCLYENHNVKIQMGGSDQWGNITTGLEIIRKLHGESADAVAMTFNLLVDENGKKFGKST 228

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--A 298
             G++WL+  MTSPY+ +Q+  N  D  +  + K LT L + EI+++     +   +  A
Sbjct: 229 GGGSLWLDPNMTSPYSIYQFLLNQSDVKIEEYLKWLTFLEVEEINKIMTQHNENKTKRIA 288

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECF----------DMSIHSQHMPTISISKDEVSR 348
           +K +A E+   +HG + A K    +   F          D+S+   ++P I     EV  
Sbjct: 289 QKKLAFELVKDIHGVDIANKCIRISEILFNKSNEELNIEDISMLLGYLPCI-----EVKE 343

Query: 349 GMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGK 408
           G   + ++      +S  EAR  +  N   I+N+II++E   I    F+    + L  GK
Sbjct: 344 GEKFIEILKNNQIVSSNREAREFISKNTFLIDNNIINDENYSITFNKFNGQYAL-LKKGK 402

Query: 409 KNHII 413
           K+  I
Sbjct: 403 KDFYI 407


>gi|281201032|gb|EFA75246.1| tyrosine-tRNA ligase [Polysphondylium pallidum PN500]
          Length = 480

 Score =  205 bits (521), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 123/341 (36%), Positives = 177/341 (51%), Gaps = 36/341 (10%)

Query: 3   AFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
           A   + +  L  RGFI+Q++N  E  +  +   ++ Y G+D TA SLH G+L  LM+L  
Sbjct: 41  ATGDNVIKTLRSRGFIYQMTNNDEEMVKITNTSISLYAGFDPTADSLHIGNLLTLMVLLH 100

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMM-------RSQEIQENIEKIKGIFSSFIK 115
            ++ GHKP++L+GG T++IGDPS +   R  +        S  I ENI  I G       
Sbjct: 101 FKRHGHKPVALLGGATALIGDPSGKSTDRPQLDRSYVENNSSYINENIVDILG------- 153

Query: 116 YGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL------------ 163
                 D  ++NN  W  SI  ID  R++G +F V  ML  + V +RL            
Sbjct: 154 -----KDTTIVNNIDWNKSISIIDFFRDVGRYFRVGNMLRKDFVHNRLGTLSENGKQLSL 208

Query: 164 ---KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
                   +S  EF Y + QA DFV L + + C +Q+GGSDQWGNI  G +L ++  +  
Sbjct: 209 NDDDSASGISLPEFCYSLFQANDFVHLNQTHQCVIQVGGSDQWGNITDGCELIKKKLSKP 268

Query: 221 LFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLP 280
            + +T PLLT + G K+GK+   +IWL+ + TS YNF+QYW  + D DV    K  T LP
Sbjct: 269 AYGITIPLLTNSQGKKLGKSEGNSIWLSSKKTSAYNFYQYWIQVSDQDVEKLLKLFTLLP 328

Query: 281 MSEIDRMAKLQGKE--INEAKKIIATEITTMVHGREEAEKA 319
           + EI  +     KE  +   +K IA  +T +VHG    E A
Sbjct: 329 LEEIQSIVDAHNKEPHLRLGQKKIAECVTQLVHGDRGLEDA 369


>gi|332257527|ref|XP_003277855.1| PREDICTED: tyrosyl-tRNA synthetase, mitochondrial [Nomascus
           leucogenys]
          Length = 477

 Score =  204 bits (520), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 137/423 (32%), Positives = 208/423 (49%), Gaps = 24/423 (5%)

Query: 15  RGFIHQISNPRELDILCSQGVV----TAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           + F  +     EL  L  +G      T Y G+D TA SLH GHL  L+ LF LQ+ GH  
Sbjct: 49  KDFFPETGTKIELPELFDRGTASFPQTIYCGFDPTADSLHVGHLLALLGLFHLQRAGHNV 108

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN-------IEKIKGIFSSFIKYGTGKTDA 123
           I+L+GG T+ +GDPS R + R  + +  ++ N       +E +          G      
Sbjct: 109 IALVGGATARLGDPSGRTKEREALETDRVRANARALRLGLEALAANHQQLFTDGRSWGSF 168

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            +L+N  W      +D L  +G  F +  +LS +SV+ RLK  + +S  EF Y +LQAYD
Sbjct: 169 TVLDNSAWYEKRHLVDFLAAVGGHFRMGTLLSRQSVQLRLKSPEGMSLAEFFYQVLQAYD 228

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F  L + Y CR+Q+GGSDQ GNI+ G +   +L    +F +T PL+T+ +G K+GK+   
Sbjct: 229 FYYLFQRYGCRVQLGGSDQLGNIMSGYEFINKLTGEDVFGITVPLITSTTGAKLGKSAGN 288

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKI 301
           A+WLN++ TSP+  +Q++    D  V  + K  T LP+ EID + +L  KE      +K 
Sbjct: 289 AVWLNRDKTSPFELYQFFVRQPDDSVERYLKLFTFLPLPEIDHIMQLHVKEPERRGPQKR 348

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTI----SISKDEVSRGMG 351
           +A E+T +VHGRE  + A       +  SI +      Q +  +      S+  +  G  
Sbjct: 349 LAAEVTKLVHGREGLDSAKRCTKALYHSSIDALEVMSDQELKELFKEAPFSEFFLDPGTS 408

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISN-EKLQIKLQDFDSTGNIKLSFGKKN 410
           +L    KA          R +    + IN+  ++N E + I  Q     G   L  GK+N
Sbjct: 409 VLDTCRKANAIPDGPRGYRMITEGGVSINHQQVTNPESVLIVGQHILKNGLSLLKIGKRN 468

Query: 411 HII 413
             I
Sbjct: 469 FYI 471


>gi|156060931|ref|XP_001596388.1| hypothetical protein SS1G_02608 [Sclerotinia sclerotiorum 1980]
 gi|154700012|gb|EDN99750.1| hypothetical protein SS1G_02608 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 698

 Score =  204 bits (519), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 116/357 (32%), Positives = 196/357 (54%), Gaps = 28/357 (7%)

Query: 8   FLSILSERGFIHQISNPR-ELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
            LSIL ERG++HQI+  R E+D + ++  + AY+G D TA SLH GHL  LM LFW+   
Sbjct: 67  MLSILEERGYVHQITGSRDEVDRMMTEKRLGAYVGVDPTAPSLHIGHLLPLMSLFWMYVH 126

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEK----IKGIFSSFIKYGTGKTD 122
           G+  +SL+GG T+ IGDP+ R  +R  M+S    ENI K    +KGI+ +   YG     
Sbjct: 127 GYHTVSLVGGATAKIGDPTDRLTTREKMKSTTRNENILKMHYQMKGIWLNVEAYGRKHGY 186

Query: 123 AL-------MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFN 175
                    ++NN  W+  +  ++LL+ +G    +  M++ ++V++++ +   +S+ EF 
Sbjct: 187 KWEWAWKRGLVNNNAWMNGLTVMELLQVLGPGMRMGAMIAKDTVKNKMNKGDGMSYAEFT 246

Query: 176 YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL--------------KTPKL 221
           Y +LQ++D+  +       +Q+GGSDQ+GNI  G+D  + +              K    
Sbjct: 247 YPLLQSWDWWHMYNTKGITMQIGGSDQYGNITAGVDAVKYILANHPDPTIKEQHEKATPP 306

Query: 222 FALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPM 281
           F  T PLLTT+SG K GK+   A+WL+K+M S ++ + ++    D DV  + K  T +P+
Sbjct: 307 FGFTVPLLTTSSGAKFGKSAGNALWLDKDMMSSFDLYGHFLRTSDQDVEKYLKLFTFMPV 366

Query: 282 SEIDRMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM 336
            EI ++ +  ++     +A+  +A +   +VHG  EA+ A       F  S +++++
Sbjct: 367 EEITKLMEEHMKAPSQRQAQHKLARDFLELVHGEPEAKAAELQHRLLFSKSNNAENL 423


>gi|193216674|ref|YP_001999916.1| tyrosyl tRNA synthetase [Mycoplasma arthritidis 158L3-1]
 gi|193001997|gb|ACF07212.1| tyrosyl tRNA synthetase [Mycoplasma arthritidis 158L3-1]
          Length = 411

 Score =  203 bits (516), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 138/414 (33%), Positives = 216/414 (52%), Gaps = 25/414 (6%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG    IS+  + + L S   V  Y G+D TA SLH G+  Q++ L   +K G KP+
Sbjct: 9   LKNRGIFSNISSEEKFNALESN--VGVYTGFDPTAKSLHLGNYVQIVNLLRFKKFGFKPL 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +++GG T +IGDPS+R   R+++  + I  N   IK     F     G T   + +N   
Sbjct: 67  AVLGGLTGMIGDPSYRQAERKLLDEKTILANKNAIKKQLERF-----GLT---IFDNFAI 118

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
                 +D LR++G   ++N +LS ES+ +RL  E+ LSFLEF+Y ++Q +DF  L +N 
Sbjct: 119 YKDWSMLDFLRKLGPLVNINYLLSKESIATRL--EKGLSFLEFSYQLIQGWDFKYLYENQ 176

Query: 192 DCRLQMGGSDQWGNIICGIDLGERL--KTPKLFALTSPLLTTASGTKMGK-TLSGAIWLN 248
           + ++Q+GGSDQWGNI  G+++  +L  +     A+T+ LL   SG K GK T  G++WL+
Sbjct: 177 NVKIQLGGSDQWGNITTGLEIIRKLHGEGSTAVAITANLLLDESGKKFGKSTGGGSLWLD 236

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM---AKLQGKEINEAKKIIATE 305
           KEMTSP+  +Q+  N  D  V  +   LT L   EI ++   AK   K    A+K +A E
Sbjct: 237 KEMTSPFAIYQFLLNRSDEKVEEYLNWLTFLSQEEIKKVIDQAK-NNKAARLAQKALAYE 295

Query: 306 ITTMVHGREEAEKAATAAMECF-----DMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           +   +H +E AE+    +   F      ++ +   M   ++ + E+      +  I  +G
Sbjct: 296 VVKDIHSQEIAEQCIKISDILFAKSNNGLTKNDLVMLRGTLPEYEIKPNQKFIEAIKASG 355

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
             TS  E R  ++  +  I+  ++ NE   I   +FDS   + L  GKK  II 
Sbjct: 356 ICTSNREIREFVQKKSFAIDGVVVDNENQIISFNNFDSEFAL-LKKGKKEFIIL 408


>gi|148989919|ref|ZP_01821202.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae SP6-BS73]
 gi|147924704|gb|EDK75789.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae SP6-BS73]
          Length = 324

 Score =  203 bits (516), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 116/322 (36%), Positives = 176/322 (54%), Gaps = 21/322 (6%)

Query: 107 KGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE 166
           K  F  F  +  G+  A+M+NN  W  SI +ID LR+IG +F+VN M+S ESV+ R+  E
Sbjct: 8   KDNFLVFFDFENGENKAVMVNNYDWFGSISFIDFLRDIGKYFTVNYMMSKESVKKRI--E 65

Query: 167 QSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTS 226
             +S+ EF Y I+Q YDF  L ++++  LQ+GGSDQWGN+  G +L  R        +T 
Sbjct: 66  TGISYTEFAYQIMQGYDFFVLNQDHNVTLQIGGSDQWGNMTAGTELLRRKADKTGHVITV 125

Query: 227 PLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR 286
           PL+T A+G K GK+   A+WLN E TSPY  +Q+W N+ DAD V F K  T L + EI+ 
Sbjct: 126 PLITDATGKKFGKSEGNAVWLNPEKTSPYEMYQFWMNVMDADAVRFLKIFTFLSLDEIED 185

Query: 287 MAKLQGKEINE--AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS----------Q 334
           + K      +E  A+K++A E+ T+VHG E  ++A     + F  +I +          +
Sbjct: 186 IRKQFEAAPHERLAQKVLAREVVTLVHGEEAYKEALNITEQLFAGNIKNLSVKELKQGLR 245

Query: 335 HMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
            +P   +  DE +    ++ L+V +G   S  +AR  +++ AI +N   I +  L   L 
Sbjct: 246 GVPNYQVQADENN---NIVELLVSSGIVNSKRQAREDVQNGAIYVNGDRIQD--LDYVLS 300

Query: 395 DFDSTGN--IKLSFGKKNHIIC 414
           D D   N    +  GKK + + 
Sbjct: 301 DADKLENELTVIRRGKKKYFVL 322


>gi|323331216|gb|EGA72634.1| Msy1p [Saccharomyces cerevisiae AWRI796]
          Length = 503

 Score =  202 bits (514), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 133/410 (32%), Positives = 202/410 (49%), Gaps = 42/410 (10%)

Query: 7   DFLSILSERGFIHQISNPREL--DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           + L  L +RG + Q+S P       L     +  Y G D TA SLH G+L  LM+L    
Sbjct: 55  NILDELKQRGLVSQVSQPESFLRTKLNGNDKIKLYCGVDPTAQSLHLGNLVPLMVLLHFY 114

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG------- 117
             GH  ++++GG T  +GDPS R   R +M +   Q N+  I      F K G       
Sbjct: 115 VKGHDIVTVIGGATGKVGDPSGRKTERDVMENDIRQSNVASISQQLQRFFKNGLEYYRNR 174

Query: 118 --------TGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSL 169
                   +GK      NN  W   IK +D L + G    V  ML+ +S+ SRL+ +  L
Sbjct: 175 CALTEDVPSGKYTPR--NNFNWWKDIKMLDFLADFGRHIRVQSMLARDSISSRLQTKNGL 232

Query: 170 SFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK----LFALT 225
            F EF Y +LQAYDF  L K  +  +Q+GG+DQWGNI  GIDL  R++  K     F +T
Sbjct: 233 GFNEFTYQVLQAYDFYHLYKEENVTIQVGGNDQWGNITAGIDLINRIQPIKNKGLPFGIT 292

Query: 226 SPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID 285
            PLLTTA+G K GK+   A++++  + + Y+ +Q++ N  DADV  F K  T L  SEI 
Sbjct: 293 VPLLTTATGEKFGKSAGNAVFIDPSINTAYDVYQFFYNTLDADVPKFLKIFTFLNSSEIK 352

Query: 286 RMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISK 343
           ++ +  ++   +   + ++A E+T M++G       + +  E     I  ++  T+S +K
Sbjct: 353 KIVETHIKSPSLRYGQTLLAKEVTDMLYG-----VGSGSDSEALSNIIFGRYDGTLSAAK 407

Query: 344 -----------DEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNS 382
                          R + L+ LI K     S +EARR L   ++ +++S
Sbjct: 408 LVDLCKKARILQYADREIDLIKLICKL-VNCSVSEARRKLSQGSVYLHHS 456


>gi|256274193|gb|EEU09101.1| Msy1p [Saccharomyces cerevisiae JAY291]
          Length = 492

 Score =  202 bits (514), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 133/410 (32%), Positives = 202/410 (49%), Gaps = 42/410 (10%)

Query: 7   DFLSILSERGFIHQISNPREL--DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           + L  L +RG + Q+S P       L     +  Y G D TA SLH G+L  LM+L    
Sbjct: 55  NILDELKQRGLVSQVSQPESFLRTKLNGNDKIKLYCGVDPTAQSLHLGNLVPLMVLLHFY 114

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG------- 117
             GH  ++++GG T  +GDPS R   R +M +   Q N+  I      F K G       
Sbjct: 115 VKGHDIVTVIGGATGKVGDPSGRKTERDVMENDIRQNNVTSISQQLQRFFKNGLEYYRNR 174

Query: 118 --------TGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSL 169
                   +GK      NN  W   IK +D L + G    V  ML+ +S+ SRL+ +  L
Sbjct: 175 CALTEDVPSGKYTPR--NNFNWWKDIKMLDFLADFGRHIRVQSMLARDSISSRLQTKNGL 232

Query: 170 SFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK----LFALT 225
            F EF Y +LQAYDF  L K  +  +Q+GG+DQWGNI  GIDL  R++  K     F +T
Sbjct: 233 GFNEFTYQVLQAYDFYHLYKEENVTIQVGGNDQWGNITAGIDLINRIQPIKNKGLPFGIT 292

Query: 226 SPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID 285
            PLLTTA+G K GK+   A++++  + + Y+ +Q++ N  DADV  F K  T L  SEI 
Sbjct: 293 VPLLTTATGEKFGKSAGNAVFIDPSINTAYDVYQFFYNTLDADVPKFLKIFTFLNSSEIK 352

Query: 286 RMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISK 343
           ++ +  ++   +   + ++A E+T M++G       + +  E     I  ++  T+S +K
Sbjct: 353 KIVETHIKSPSLRYGQTLLAKEVTDMLYG-----VGSGSDSEALSNIIFGRYDGTLSAAK 407

Query: 344 -----------DEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNS 382
                          R + L+ LI K     S +EARR L   ++ +++S
Sbjct: 408 LVDLCKKARILQYADREIDLIKLICKL-VNCSVSEARRKLSQGSVYLHHS 456


>gi|207340573|gb|EDZ68882.1| YPL097Wp-like protein [Saccharomyces cerevisiae AWRI1631]
          Length = 492

 Score =  202 bits (513), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 133/410 (32%), Positives = 202/410 (49%), Gaps = 42/410 (10%)

Query: 7   DFLSILSERGFIHQISNPREL--DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           + L  L +RG + Q+S P       L     +  Y G D TA SLH G+L  LM+L    
Sbjct: 55  NILDELKQRGLVSQVSQPESFLRTKLNGNDKIKLYCGVDPTAQSLHLGNLVPLMVLLHFY 114

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG------- 117
             GH  ++++GG T  +GDPS R   R +M +   Q N+  I      F K G       
Sbjct: 115 VKGHDIVTVIGGATGKVGDPSGRKTERDVMENDIRQSNVASISQQLQRFFKNGLEYYRNR 174

Query: 118 --------TGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSL 169
                   +GK      NN  W   IK +D L + G    V  ML+ +S+ SRL+ +  L
Sbjct: 175 CALTEDVPSGKYTPR--NNFNWWKDIKMLDFLADFGRHIRVQSMLARDSISSRLQTKNGL 232

Query: 170 SFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK----LFALT 225
            F EF Y +LQAYDF  L K  +  +Q+GG+DQWGNI  GIDL  R++  K     F +T
Sbjct: 233 GFNEFTYQVLQAYDFYHLYKEENVTIQVGGNDQWGNITAGIDLINRIQPIKNKGLPFGIT 292

Query: 226 SPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID 285
            PLLTTA+G K GK+   A++++  + + Y+ +Q++ N  DADV  F K  T L  SEI 
Sbjct: 293 VPLLTTATGEKFGKSAGNAVFIDPSINTAYDVYQFFYNTLDADVPKFLKIFTFLNSSEIK 352

Query: 286 RMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISK 343
           ++ +  ++   +   + ++A E+T M++G       + +  E     I  ++  T+S +K
Sbjct: 353 KIVETHIKSPSLRYGQTLLAKEVTDMLYG-----VGSGSDSEALSNIIFGRYDGTLSAAK 407

Query: 344 -----------DEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNS 382
                          R + L+ LI K     S +EARR L   ++ +++S
Sbjct: 408 LVDLCKKARILQYADREIDLIKLICKL-VNCSVSEARRKLSQGSVYLHHS 456


>gi|6325160|ref|NP_015228.1| Msy1p [Saccharomyces cerevisiae S288c]
 gi|1351184|sp|P48527|SYYM_YEAST RecName: Full=Tyrosyl-tRNA synthetase, mitochondrial; AltName:
           Full=Tyrosine--tRNA ligase; Short=TyrRS; Flags:
           Precursor
 gi|825503|gb|AAA67122.1| tyrosyl-tRNA synthetase [Saccharomyces cerevisiae]
 gi|1151229|gb|AAB68202.1| Msy1p: encodes a mitochondrial tyrosyl-tRNA synthetase
           [Saccharomyces cerevisiae]
 gi|151942699|gb|EDN61045.1| mitochondrial tyrosyl-tRNA synthetase [Saccharomyces cerevisiae
           YJM789]
 gi|190407858|gb|EDV11123.1| tyrosine-tRNA ligase [Saccharomyces cerevisiae RM11-1a]
 gi|285815443|tpg|DAA11335.1| TPA: Msy1p [Saccharomyces cerevisiae S288c]
          Length = 492

 Score =  202 bits (513), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 133/410 (32%), Positives = 202/410 (49%), Gaps = 42/410 (10%)

Query: 7   DFLSILSERGFIHQISNPREL--DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           + L  L +RG + Q+S P       L     +  Y G D TA SLH G+L  LM+L    
Sbjct: 55  NILDELKQRGLVSQVSQPESFLRTKLNGNDKIKLYCGVDPTAQSLHLGNLVPLMVLLHFY 114

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG------- 117
             GH  ++++GG T  +GDPS R   R +M +   Q N+  I      F K G       
Sbjct: 115 VKGHDIVTVIGGATGKVGDPSGRKTERDVMENDIRQSNVASISQQLQRFFKNGLEYYRNR 174

Query: 118 --------TGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSL 169
                   +GK      NN  W   IK +D L + G    V  ML+ +S+ SRL+ +  L
Sbjct: 175 CALTEDVPSGKYTPR--NNFNWWKDIKMLDFLADFGRHIRVQSMLARDSISSRLQTKNGL 232

Query: 170 SFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK----LFALT 225
            F EF Y +LQAYDF  L K  +  +Q+GG+DQWGNI  GIDL  R++  K     F +T
Sbjct: 233 GFNEFTYQVLQAYDFYHLYKEENVTIQVGGNDQWGNITAGIDLINRIQPIKNKGLPFGIT 292

Query: 226 SPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID 285
            PLLTTA+G K GK+   A++++  + + Y+ +Q++ N  DADV  F K  T L  SEI 
Sbjct: 293 VPLLTTATGEKFGKSAGNAVFIDPSINTAYDVYQFFYNTLDADVPKFLKIFTFLNSSEIK 352

Query: 286 RMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISK 343
           ++ +  ++   +   + ++A E+T M++G       + +  E     I  ++  T+S +K
Sbjct: 353 KIVETHIKSPSLRYGQTLLAKEVTDMLYG-----VGSGSDSEALSNIIFGRYDGTLSAAK 407

Query: 344 -----------DEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNS 382
                          R + L+ LI K     S +EARR L   ++ +++S
Sbjct: 408 LVDLCKKARILQYADREIDLIKLICKL-VNCSVSEARRKLSQGSVYLHHS 456


>gi|91092398|ref|XP_968995.1| PREDICTED: similar to tyrosyl-tRNA synthetase [Tribolium castaneum]
          Length = 457

 Score =  202 bits (513), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 136/435 (31%), Positives = 221/435 (50%), Gaps = 24/435 (5%)

Query: 4   FKSDFLSILSERGFIHQI---SNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           + S  L  L ERG    I   +    +  L +      Y G+D TA SLH G+L  L+ L
Sbjct: 19  YSSRNLLKLKERGMYQDIFPDTATNTVTDLLNAAPQRVYAGFDPTADSLHIGNLLVLINL 78

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI----EKIKGIFSSFIKY 116
              Q+ GH+PI+L+GG T+ IGDPS +   R  + S  + EN+      I+ +F +  KY
Sbjct: 79  IHWQRGGHQPIALIGGATAKIGDPSGKTSEREKLASAFVDENVIGIRNNIETLFYNHEKY 138

Query: 117 ---GTGKTDALML-NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFL 172
                GK   L++ NNE+W   +  IDL+   G +  +  +LS  SV++RL+    +SF 
Sbjct: 139 LWKKKGKLAPLIIVNNESWYSKMSPIDLIGGAGRYLRMGTLLSRTSVQTRLQSPAGMSFT 198

Query: 173 EFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTA 232
           EF+Y + QAYD++ L + Y+C  Q+GG+DQ GNI+ G +L  +    +++ALT P++TT 
Sbjct: 199 EFSYQLFQAYDWLHLFQKYNCSFQIGGNDQMGNIMSGHELISKTCDKQVYALTVPIITTE 258

Query: 233 SGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--L 290
            G K GK+   A+WL+ E TSP+  +Q++    D +V    K  T  P+  I  + +   
Sbjct: 259 MGDKFGKSAGNAMWLSAEKTSPFTLYQFFVRQVDTEVEKMLKFFTFEPVGSIKDLMRRHT 318

Query: 291 QGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS-QHMPTISI-------S 342
           +  E+   +K +A ++  +VHG +  E A  A    ++ SI +   M  + I       +
Sbjct: 319 EKPELRLPQKYLAEQVVLLVHGEKGLEAAHKATKVLYERSITALAEMNPLEIKSLFEGAT 378

Query: 343 KDEV--SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG 400
             E+    G  +L L + AG   +  +A R + +    IN+   +N    + L     + 
Sbjct: 379 VVEILPEPGQSVLDLAMSAGCFLTKEDALRIISAGGFYINHQKTNNPNEVLNLNVHRLSN 438

Query: 401 NIK-LSFGKKNHIIC 414
           N+  L  GKKN+ + 
Sbjct: 439 NVTLLRVGKKNYYVV 453


>gi|323306996|gb|EGA60280.1| Msy1p [Saccharomyces cerevisiae FostersO]
          Length = 492

 Score =  201 bits (511), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 132/410 (32%), Positives = 202/410 (49%), Gaps = 42/410 (10%)

Query: 7   DFLSILSERGFIHQISNPREL--DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           + L  L +RG + Q++ P       L     +  Y G D TA SLH G+L  LM+L    
Sbjct: 55  NILDELKQRGLVSQVTQPESFLRTKLNGNDKIKLYCGVDPTAQSLHLGNLVPLMVLLHFY 114

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG------- 117
             GH  ++++GG T  +GDPS R   R +M +   Q N+  I      F K G       
Sbjct: 115 VKGHDIVTVIGGATGKVGDPSGRKTERDVMENDIRQNNVTSISQQLQRFFKNGLEYYRNR 174

Query: 118 --------TGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSL 169
                   +GK      NN  W   IK +D L + G    V  ML+ +S+ SRL+ +  L
Sbjct: 175 CALTEDVPSGKYTPR--NNFNWWKDIKMLDFLADFGRHIRVQSMLARDSISSRLQTKNGL 232

Query: 170 SFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK----LFALT 225
            F EF Y +LQAYDF  L K  +  +Q+GG+DQWGNI  GIDL  R++  K     F +T
Sbjct: 233 GFNEFTYQVLQAYDFYHLYKEENVTIQVGGNDQWGNITAGIDLINRIQPIKNKGLPFGIT 292

Query: 226 SPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID 285
            PLLTTA+G K GK+   A++++  + + Y+ +Q++ N  DADV  F K  T L  SEI 
Sbjct: 293 VPLLTTATGEKFGKSAGNAVFIDPSINTAYDVYQFFYNTLDADVPKFLKIFTFLNSSEIK 352

Query: 286 RMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISK 343
           ++ +  ++   +   + ++A E+T M++G       + +  E     I  ++  T+S +K
Sbjct: 353 KIVETHIKSPSLRYGQTLLAKEVTDMLYG-----VGSGSDSEALSNIIFGRYDGTLSAAK 407

Query: 344 -----------DEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNS 382
                          R + L+ LI K     S +EARR L   ++ +++S
Sbjct: 408 LVDLCKKARILQYADREIDLIKLICKL-VNCSVSEARRKLSQGSVYLHHS 456


>gi|159795079|pdb|2PID|A Chain A, Crystal Structure Of Human Mitochondrial Tyrosyl-Trna
           Synthetase In Complex With An Adenylate Analog
 gi|159795080|pdb|2PID|B Chain B, Crystal Structure Of Human Mitochondrial Tyrosyl-Trna
           Synthetase In Complex With An Adenylate Analog
          Length = 356

 Score =  201 bits (511), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 117/327 (35%), Positives = 175/327 (53%), Gaps = 13/327 (3%)

Query: 17  FIHQISNPRELDILCSQGVV----TAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPIS 72
           F  +     EL  L  +G      T Y G+D TA SLH GHL  L+ LF LQ+ GH  I+
Sbjct: 24  FFPETGTKIELPELFDRGTASFPQTIYCGFDPTADSLHVGHLLALLGLFHLQRAGHNVIA 83

Query: 73  LMGGGTSIIGDPSFRDESRRMMRSQEIQEN-------IEKIKGIFSSFIKYGTGKTDALM 125
           L+GG T+ +GDPS R + R  + ++ ++ N       +E +          G       +
Sbjct: 84  LVGGATARLGDPSGRTKEREALETERVRANARALRLGLEALAANHQQLFTDGRSWGSFTV 143

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           L+N  W      +D L  +G  F +  +LS +SV+ RLK  + +S  EF Y +LQAYDF 
Sbjct: 144 LDNSAWYQKQHLVDFLAAVGGHFRMGTLLSRQSVQLRLKSPEGMSLAEFFYQVLQAYDFY 203

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L + Y CR+Q+GGSDQ GNI+ G +   +L    +F +T PL+T+ +G K+GK+   A+
Sbjct: 204 YLFQRYGCRVQLGGSDQLGNIMSGYEFINKLTGEDVFGITVPLITSTTGAKLGKSAGNAV 263

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIA 303
           WLN++ TSP+  +Q++    D  V  + K  T LP+ EID + +L  KE      +K +A
Sbjct: 264 WLNRDKTSPFELYQFFVRQPDDSVERYLKLFTFLPLPEIDHIMQLHVKEPERRGPQKRLA 323

Query: 304 TEITTMVHGREEAEKAATAAMECFDMS 330
            E+T +VHGRE  + A       +  S
Sbjct: 324 AEVTKLVHGREGLDSAKRCTQALYHRS 350


>gi|4680649|gb|AAD27714.1|AF132939_1 CGI-04 protein [Homo sapiens]
          Length = 476

 Score =  201 bits (510), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 135/423 (31%), Positives = 208/423 (49%), Gaps = 24/423 (5%)

Query: 15  RGFIHQISNPRELDILCSQGVV----TAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           + F  +     EL  L  +G      T Y G+D TA SLH GHL  L+ LF LQ+ GH  
Sbjct: 48  KDFFPETGTKIELPELFDRGTASFPQTIYCGFDPTADSLHVGHLLALLGLFHLQRAGHNV 107

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN-------IEKIKGIFSSFIKYGTGKTDA 123
           I+L+GG T+ +GDPS R + R  + ++ ++ N       +E +          G      
Sbjct: 108 IALVGGATAALGDPSGRTKEREALETERVRANARALRLGLEALAANHQQLFTDGRSWGSF 167

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            +L+N  W      +D L  +G  F +  +LS +SV+ RLK  + +S  EF Y +LQAYD
Sbjct: 168 TVLDNSAWYQKQHLVDFLAAVGVHFRMGTLLSRQSVQLRLKSPEGMSLAEFFYQVLQAYD 227

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F  L + Y CR+Q+GGSDQ GNI+ G +   +L    +F +T  L+T+ +G K+GK+   
Sbjct: 228 FYYLFQRYGCRVQLGGSDQLGNIMSGYEFINKLTGEDVFGITVTLITSTTGAKLGKSAGN 287

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKI 301
           A+WLN++ TSP+  +Q++    +  V  + K  T LP+ EID + +L  KE      +K 
Sbjct: 288 AVWLNRDKTSPFELYQFFVRQPEDSVERYLKLFTFLPLPEIDHIMQLHVKEPERRGPQKR 347

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTI----SISKDEVSRGMG 351
           +A E+T +VHGRE  + A       +  SI +      Q +  +      S+  +  G  
Sbjct: 348 LAAEVTKLVHGREGLDSAKRCTQALYHSSIDALEVMSDQELKELFKEAPFSEFFLDPGTS 407

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISN-EKLQIKLQDFDSTGNIKLSFGKKN 410
           +L    KA          R +    + IN+  ++N E + I  Q     G   L  GK+N
Sbjct: 408 VLDTCRKANAIPDGPRGYRMITEGGVSINHQQVTNPESVLIVGQHILKNGLSLLKIGKRN 467

Query: 411 HII 413
             I
Sbjct: 468 FYI 470


>gi|308189596|ref|YP_003922527.1| tyrosine--tRNA ligase [Mycoplasma fermentans JER]
 gi|319776747|ref|YP_004136398.1| tyrosyl-tRNA synthetase [Mycoplasma fermentans M64]
 gi|307624338|gb|ADN68643.1| tyrosine--tRNA ligase [Mycoplasma fermentans JER]
 gi|318037822|gb|ADV34021.1| Tyrosyl-tRNA synthetase [Mycoplasma fermentans M64]
          Length = 411

 Score =  201 bits (510), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 121/393 (30%), Positives = 214/393 (54%), Gaps = 33/393 (8%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L  L  RG + QISN  +   L  + V   Y G+D TA SLH G+   + +L   ++ G 
Sbjct: 4   LEDLKLRGILKQISNEDKFKKLDPKKV-AVYCGFDPTAQSLHLGNYVLISVLKRFKQYGF 62

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           K   L+GG T +IGDPSF+D  R ++ ++ ++ N  KI+    +            +++N
Sbjct: 63  KVYGLIGGATGMIGDPSFKDSERVLLDNKTLKLNKSKIRKQLEA--------QGLEVIDN 114

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             +   +  ++ LR+ G   +V+ M++ +SV+ R++R   LSF EF+Y +LQ +DF++L 
Sbjct: 115 IQFYEKMNVLEFLRDAGKLVNVSYMMTKDSVQKRIER--GLSFTEFSYQVLQGWDFLQLY 172

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGK-TLSGAI 245
           KNY+  +Q+GGSDQWGN+  G+++  +++    K   +T+ LLT  +G K+GK T  G +
Sbjct: 173 KNYNIMIQVGGSDQWGNLTTGLEMISKVEGDDHKAVVVTADLLTDENGNKIGKSTGGGKL 232

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIA 303
           WL+K M SPY  +QY  N  D+ V +F   LT L   +I ++ +   Q    + A++++A
Sbjct: 233 WLDKTMASPYEMYQYLLNQPDSKVETFLNWLTFLDNKKIAKIMEEHNQAPFKHVAQRVVA 292

Query: 304 TEITTMVHGREEAEKAA------------TAAMECFDMSIHSQHMPTISISKDEVSRGMG 351
           +E+   + G++E + A             T+ +   D+    Q++P +     E+ +   
Sbjct: 293 SEVVRDIFGQDELDSAIQITEVLFNKNFDTSKLNLKDLKSIEQYLPVV-----EIKQNQN 347

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSII 384
           ++  +++ GF  S  EAR  + + A+KI+  I+
Sbjct: 348 IIETLIEKGFIASKREAREFMATKALKIDEDIV 380


>gi|238810146|dbj|BAH69936.1| hypothetical protein [Mycoplasma fermentans PG18]
          Length = 431

 Score =  200 bits (509), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 121/393 (30%), Positives = 214/393 (54%), Gaps = 33/393 (8%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L  L  RG + QISN  +   L  + V   Y G+D TA SLH G+   + +L   ++ G 
Sbjct: 24  LEDLKLRGILKQISNEDKFKKLDPKKV-AVYCGFDPTAQSLHLGNYVLISVLKRFKQYGF 82

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           K   L+GG T +IGDPSF+D  R ++ ++ ++ N  KI+    +            +++N
Sbjct: 83  KVYGLIGGATGMIGDPSFKDSERVLLDNKTLKLNKSKIRKQLEA--------QGLEVIDN 134

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             +   +  ++ LR+ G   +V+ M++ +SV+ R++R   LSF EF+Y +LQ +DF++L 
Sbjct: 135 IQFYEKMNVLEFLRDAGKLVNVSYMMTKDSVQKRIER--GLSFTEFSYQVLQGWDFLQLY 192

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGK-TLSGAI 245
           KNY+  +Q+GGSDQWGN+  G+++  +++    K   +T+ LLT  +G K+GK T  G +
Sbjct: 193 KNYNIMIQVGGSDQWGNLTTGLEMISKVEGDDHKAVVVTADLLTDENGNKIGKSTGGGKL 252

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIA 303
           WL+K M SPY  +QY  N  D+ V +F   LT L   +I ++ +   Q    + A++++A
Sbjct: 253 WLDKTMASPYEMYQYLLNQPDSKVETFLNWLTFLDNKKIAKIMEEHNQAPFKHVAQRVVA 312

Query: 304 TEITTMVHGREEAEKAA------------TAAMECFDMSIHSQHMPTISISKDEVSRGMG 351
           +E+   + G++E + A             T+ +   D+    Q++P +     E+ +   
Sbjct: 313 SEVVRDIFGQDELDSAIQITEVLFNKNFDTSKLNLKDLKSIEQYLPVV-----EIKQNQN 367

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSII 384
           ++  +++ GF  S  EAR  + + A+KI+  I+
Sbjct: 368 IIETLIEKGFIASKREAREFMATKALKIDEDIV 400


>gi|154322040|ref|XP_001560335.1| tyrosyl-tRNA synthetase, mitochondrial precursor [Botryotinia
           fuckeliana B05.10]
 gi|150850414|gb|EDN25607.1| tyrosyl-tRNA synthetase, mitochondrial precursor [Botryotinia
           fuckeliana B05.10]
          Length = 693

 Score =  200 bits (509), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 118/360 (32%), Positives = 194/360 (53%), Gaps = 28/360 (7%)

Query: 5   KSDFLSILSERGFIHQISNPR-ELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           K   LSIL ERG++HQI+  R ELD   ++  + AY+G D TA SLH GHL   M LFW+
Sbjct: 64  KKSMLSILEERGYVHQITGSRDELDRAMTENRLGAYVGVDPTAPSLHVGHLLPFMSLFWM 123

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEK----IKGIFSSFIKYGTG 119
              G+  +SL+GG T+ IGDP+ R  +R  M+S    ENI K    +KGI+ +   YG  
Sbjct: 124 YIHGYHTVSLVGGATAKIGDPTDRLTTREKMKSTTRNENILKMHYQLKGIWLNVEAYGRK 183

Query: 120 KTDAL-------MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFL 172
                       ++NN  W+  +  ++LL+ +G    +  M++ ++V++++     +S+ 
Sbjct: 184 YGYQWEWAWRRGLVNNHHWMNKLTVMELLQILGPGMRIGAMIAKDTVKNKMNNGDGMSYS 243

Query: 173 EFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL--------------KT 218
           EF+Y +LQ++D+  +       +Q+GGSDQ+GNI  GID  + +              K 
Sbjct: 244 EFSYPLLQSWDWWHMYNTKGITMQIGGSDQYGNITAGIDAVKYILANHPDPVVKEQHKKA 303

Query: 219 PKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
                 T PLLTT++G K GK+   A+WL+K+M S ++ + Y+    D DV  + K  T 
Sbjct: 304 VPPIGFTVPLLTTSAGAKFGKSAGNALWLDKDMMSSFDLYAYFLRTSDQDVERYLKLFTF 363

Query: 279 LPMSEIDRMAKLQGKEIN--EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM 336
           +PM +I++  +   KE +  +A+  +A +   ++HG  +A+ A       F  S +S ++
Sbjct: 364 MPMEQINKTMEEHMKEPHSRKAQHALARDFLELIHGVPDAKAAELKHRLLFSKSSNSANV 423


>gi|323346192|gb|EGA80482.1| Msy1p [Saccharomyces cerevisiae Lalvin QA23]
          Length = 492

 Score =  200 bits (508), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 132/410 (32%), Positives = 201/410 (49%), Gaps = 42/410 (10%)

Query: 7   DFLSILSERGFIHQISNPREL--DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           + L  L +RG + Q+S P       L     +  Y G D TA SLH G+L  LM+L    
Sbjct: 55  NILDELKQRGLVSQVSQPESFLRTKLNGNDKIKLYCGVDPTAQSLHLGNLVPLMVLLHFY 114

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG------- 117
             GH  ++++GG T  +GDPS R   R +M +     N+  I      F K G       
Sbjct: 115 VKGHDIVTVIGGATGKVGDPSGRKTERDVMENDIRHSNVASISQQLQRFFKNGLEYYRNR 174

Query: 118 --------TGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSL 169
                   +GK      NN  W   IK +D L + G    V  ML+ +S+ SRL+ +  L
Sbjct: 175 CALTEDVPSGKYTPR--NNFNWWKDIKMLDFLADFGRHIRVQSMLARDSISSRLQTKNGL 232

Query: 170 SFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK----LFALT 225
            F EF Y +LQAYDF  L K  +  +Q+GG+DQWGNI  GIDL  R++  K     F +T
Sbjct: 233 GFNEFTYQVLQAYDFYHLYKEENVTIQVGGNDQWGNITAGIDLINRIQPIKNKGLPFGIT 292

Query: 226 SPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID 285
            PLLTTA+G K GK+   A++++  + + Y+ +Q++ N  DADV  F K  T L  SEI 
Sbjct: 293 VPLLTTATGEKFGKSAGNAVFIDPSINTAYDVYQFFYNTLDADVPKFLKIFTFLNSSEIK 352

Query: 286 RMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISK 343
           ++ +  ++   +   + ++A E+T M++G       + +  E     I  ++  T+S +K
Sbjct: 353 KIVETHIKSPSLRYGQTLLAKEVTDMLYG-----VGSGSDSEALSNIIFGRYDGTLSAAK 407

Query: 344 -----------DEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNS 382
                          R + L+ LI K     S +EARR L   ++ +++S
Sbjct: 408 LVDLCKKARILQYADREIDLIKLICKL-VNCSVSEARRKLSQGSVYLHHS 456


>gi|327272181|ref|XP_003220864.1| PREDICTED: tyrosyl-tRNA synthetase, mitochondrial-like [Anolis
           carolinensis]
          Length = 481

 Score =  200 bits (508), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 132/439 (30%), Positives = 221/439 (50%), Gaps = 27/439 (6%)

Query: 2   PAFKSDFLSILSERGFIHQISNPRELD------ILCSQGVVTAYIGYDLTASSLHAGHLT 55
           P  +   L+   ERG  H++  P+  +      +   +  +  Y G+D TA SLHAGHL 
Sbjct: 30  PPKEKGLLASQCERGLFHEVFPPQAAEEHLLRLLEPGRPPIAVYCGFDPTADSLHAGHLL 89

Query: 56  QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMM-------RSQEIQENIEKIKG 108
            L+ L   Q+ GH  I+L+GG T+ +GDPS R ++R  +       +++ ++E +++I  
Sbjct: 90  PLLGLLHFQRAGHDVIALVGGATARLGDPSGRTQAREPLSEEKARAQAEGLREGLQRIFQ 149

Query: 109 IFSSFIKYGTGKTDALMLNNETWLCSIKYIDLL-REIGSFFSVNRMLSFESVRSRLKREQ 167
                   G       +L+N +WL     +  L    G    ++ +LS +S R+RL+  +
Sbjct: 150 NHRELFWSGARLGRLTLLDNTSWLARETVLGFLCGPAGVRLRMSTLLSRQSCRARLESPE 209

Query: 168 SLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSP 227
            +   EF Y  LQAYDF+ L +++ C +Q+GG+DQ GNI+ G DL  ++    +F +T P
Sbjct: 210 GMGLAEFLYPALQAYDFLHLRRHHGCLVQLGGADQLGNIMSGYDLVSKVTGEDVFGITVP 269

Query: 228 LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM 287
           L+T   G K+GK+   A+WLN+  TSP++ +Q++    D DV  + K  T LP+ EID +
Sbjct: 270 LITNTVGNKLGKSSGNAVWLNRNKTSPFDLYQFFVRQPDKDVKRYLKLFTFLPLPEIDHI 329

Query: 288 AKLQGKEINE--AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS-QHMPTISISK- 343
            ++  KE  +   +K +A E+T +VHG+E  E A       +   I + + MP   + + 
Sbjct: 330 MEMHAKEPEKWGPQKRLAAEVTKLVHGKEGLESAKRCTRALYHSDIAALETMPDQELQEL 389

Query: 344 -DE-------VSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL-Q 394
            +E       +  G  +L L  KA          R + S  + IN+  +++    + L Q
Sbjct: 390 FNEAPYVELLLEPGTTVLDLCRKANAIADGPRGHRDIISGGVSINHIKVTDPDAVLVLGQ 449

Query: 395 DFDSTGNIKLSFGKKNHII 413
                G   L  GK+N+ I
Sbjct: 450 HILRNGLSLLRIGKRNYYI 468


>gi|323335043|gb|EGA76333.1| Msy1p [Saccharomyces cerevisiae Vin13]
 gi|323352016|gb|EGA84555.1| Msy1p [Saccharomyces cerevisiae VL3]
          Length = 492

 Score =  199 bits (507), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 132/410 (32%), Positives = 200/410 (48%), Gaps = 42/410 (10%)

Query: 7   DFLSILSERGFIHQISNPREL--DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           + L  L +RG + Q+S P       L     +  Y G D TA SLH G+L  LM+L    
Sbjct: 55  NILDELKQRGLVSQVSQPESFLRTKLNGNDKIKLYCGVDPTAQSLHLGNLVPLMVLLHFY 114

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG------- 117
             GH  ++++GG T  +GDPS R   R +M +     N+  I      F K G       
Sbjct: 115 VKGHDIVTVIGGATGKVGDPSGRKTERDVMENDIRXSNVASISQQLQRFFKNGLEYYRNR 174

Query: 118 --------TGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSL 169
                   +GK      NN  W   IK +D L + G    V  ML+ +S+ SRL+ +  L
Sbjct: 175 CALTEDVPSGKYTPR--NNFNWWKDIKMLDFLADFGRHIRVQSMLARDSISSRLQTKNGL 232

Query: 170 SFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK----LFALT 225
            F EF Y +LQAYDF  L K  +  +Q+GG+DQWGNI  GIDL  R++  K     F +T
Sbjct: 233 GFNEFTYQVLQAYDFYHLYKEENVTIQVGGNDQWGNITAGIDLINRIQPIKNKGLPFGIT 292

Query: 226 SPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID 285
            PLLTTA+G K GK+   A++++  + + Y+ +Q++ N  DADV  F K  T L  SEI 
Sbjct: 293 VPLLTTATGEKFGKSAGNAVFIDPSINTAYDVYQFFYNTLDADVPKFLKIFTFLNSSEIK 352

Query: 286 RMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISK 343
           ++ +  ++   +   + ++A E+T M++G      +     E     I  ++  T+S +K
Sbjct: 353 KIVETHIKSPSLRYGQTLLAKEVTDMLYGVGSGSDS-----EALSNIIFGRYDGTLSAAK 407

Query: 344 -----------DEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNS 382
                          R + L+ LI K     S +EARR L   ++ +++S
Sbjct: 408 LVDLCKKARILQYADREIDLIKLICKL-VNCSVSEARRKLSQGSVYLHHS 456


>gi|47211197|emb|CAF95269.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 480

 Score =  199 bits (507), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 103/318 (32%), Positives = 177/318 (55%), Gaps = 10/318 (3%)

Query: 26  ELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPS 85
           +L  L   G  T Y G+D TA SLH G+L  L+ L   +  GH  ++++GG T+ IGDPS
Sbjct: 66  QLPQLLQAGSQTVYCGFDPTADSLHVGNLLALIALLHFRNAGHHVLAVVGGATAQIGDPS 125

Query: 86  FRDESRRMMRSQEIQENI----EKIKGIFSSFIKYGTGKTDAL----MLNNETWLCSIKY 137
            +   R  + +   + N     E ++ IF++   Y       L    +LNN +W      
Sbjct: 126 GKARERERLSADTAEANTRGIRESLQRIFTNHELYFHDSAKKLGTVTVLNNLSWYKDRGV 185

Query: 138 IDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQM 197
           ++ L E G  F +  MLS  SV++RL+    +S  EF Y + QA+DF  L + Y C++Q+
Sbjct: 186 VEFLAEAGRHFRMGTMLSRHSVQARLRSPDGMSLAEFTYQVFQAHDFYHLNQIYGCKIQL 245

Query: 198 GGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNF 257
           GG+DQ GN++ G +   ++   +++ L  PL+T++ G K+GKT   A+WLN++ TSP+  
Sbjct: 246 GGTDQLGNLMSGHEYIHKVSGEEVYGLAIPLVTSSVGDKLGKTAGNAVWLNRDRTSPFQL 305

Query: 258 WQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATEITTMVHGREE 315
           +Q++  + D+ +  + K  T LP++E++R+ + Q ++  +  A K +A E+T +VHG+E 
Sbjct: 306 YQFFLRLPDSGIERYLKLFTFLPLAEVERLMEQQREDPGKRLAHKRLAAEVTKLVHGKEG 365

Query: 316 AEKAATAAMECFDMSIHS 333
            + A       +  S+ +
Sbjct: 366 LDSAKRCTNVLYHNSVQA 383


>gi|171920584|ref|ZP_02931845.1| tyrosyl-tRNA synthetase [Ureaplasma urealyticum serovar 13 str.
           ATCC 33698]
 gi|185178779|ref|ZP_02964579.1| tyrosyl-tRNA synthetase [Ureaplasma urealyticum serovar 5 str. ATCC
           27817]
 gi|188024298|ref|ZP_02996986.1| tyrosyl-tRNA synthetase [Ureaplasma urealyticum serovar 7 str. ATCC
           27819]
 gi|188518560|ref|ZP_03004019.1| tyrosyl-tRNA synthetase [Ureaplasma urealyticum serovar 11 str.
           ATCC 33695]
 gi|188524115|ref|ZP_03004191.1| tyrosyl-tRNA synthetase [Ureaplasma urealyticum serovar 12 str.
           ATCC 33696]
 gi|195867737|ref|ZP_03079738.1| tyrosyl-tRNA synthetase [Ureaplasma urealyticum serovar 9 str. ATCC
           33175]
 gi|198273478|ref|ZP_03206014.1| tyrosyl-tRNA synthetase [Ureaplasma urealyticum serovar 4 str. ATCC
           27816]
 gi|209554094|ref|YP_002284539.1| tyrosyl-tRNA synthetase [Ureaplasma urealyticum serovar 10 str.
           ATCC 33699]
 gi|225550430|ref|ZP_03771379.1| tyrosine--tRNA ligase [Ureaplasma urealyticum serovar 2 str. ATCC
           27814]
 gi|225551163|ref|ZP_03772109.1| tyrosine--tRNA ligase [Ureaplasma urealyticum serovar 8 str. ATCC
           27618]
 gi|254765186|sp|B5ZAU9|SYY_UREU1 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|171903290|gb|EDT49579.1| tyrosyl-tRNA synthetase [Ureaplasma urealyticum serovar 13 str.
           ATCC 33698]
 gi|184209395|gb|EDU06438.1| tyrosyl-tRNA synthetase [Ureaplasma urealyticum serovar 5 str. ATCC
           27817]
 gi|188018972|gb|EDU57012.1| tyrosyl-tRNA synthetase [Ureaplasma urealyticum serovar 7 str. ATCC
           27819]
 gi|188997951|gb|EDU67048.1| tyrosyl-tRNA synthetase [Ureaplasma urealyticum serovar 11 str.
           ATCC 33695]
 gi|195660015|gb|EDX53395.1| tyrosyl-tRNA synthetase [Ureaplasma urealyticum serovar 12 str.
           ATCC 33696]
 gi|195660592|gb|EDX53848.1| tyrosyl-tRNA synthetase [Ureaplasma urealyticum serovar 9 str. ATCC
           33175]
 gi|198249998|gb|EDY74778.1| tyrosyl-tRNA synthetase [Ureaplasma urealyticum serovar 4 str. ATCC
           27816]
 gi|209541595|gb|ACI59824.1| tyrosyl-tRNA synthetase [Ureaplasma urealyticum serovar 10 str.
           ATCC 33699]
 gi|225378978|gb|EEH01343.1| tyrosine--tRNA ligase [Ureaplasma urealyticum serovar 8 str. ATCC
           27618]
 gi|225379584|gb|EEH01946.1| tyrosine--tRNA ligase [Ureaplasma urealyticum serovar 2 str. ATCC
           27814]
          Length = 415

 Score =  199 bits (507), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 126/400 (31%), Positives = 217/400 (54%), Gaps = 32/400 (8%)

Query: 12  LSERGFIHQISNPRELD--ILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
           L  R  I+ I+N  +L   +  ++G+   Y+G+D +A SLH G+   +MLL   +    K
Sbjct: 8   LKARNLINNITNEEKLKKALAENKGI---YVGFDPSADSLHLGNYIMIMLLKRFRLHNIK 64

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
             +L+GG T +IGDPS +   R ++    ++ NI KIK     F       T++ ++NN 
Sbjct: 65  TFALVGGATGMIGDPSGKSAERNLLDKTILEHNITKIKYQLEKF-------TNSQVINNY 117

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
            +  ++ ++D LR++G   ++N +L  E + SRL  +  +S+ EF+Y +LQ YDF++L K
Sbjct: 118 DFYKNMTFLDFLRDVGKLININYLLEKEIISSRL--DVGISYTEFSYNLLQGYDFLQLYK 175

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFA--LTSPLLTTASGTKMGKTLSGAIWL 247
           N +  +Q GGSDQWGNI  GI++  +       A  LT  LLT + G K GK+  GAI+L
Sbjct: 176 NDNIAIQAGGSDQWGNITTGIEIIRKSLGDDNIACGLTINLLTNSEGKKFGKSEKGAIYL 235

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKKIIATE 305
           ++  +S Y  +Q+  N  DADV      LT + + EI+++  A  +   +  A+K +A  
Sbjct: 236 DENKSSVYEMYQFLINQTDADVEKLLNFLTLIDVDEINKIMQAHKENPALRIAQKALAQA 295

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTL 355
           +   VHG+++ E+A   +   F+ +I+           + +PT  + KDE+     ++ L
Sbjct: 296 VVVDVHGQQKYEQALHISQVLFNGNINELNQEEFNIAIKSLPTTKLDKDEIK----IIDL 351

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           +  A  ++S   AR  L + +I +N+  +++E   +K QD
Sbjct: 352 LNLANISSSNRVARDFLSTGSILVNDIKVNDENFLVKKQD 391


>gi|15828956|ref|NP_326316.1| tyrosyl-tRNA synthetase 1 (tyrosine--tRNA ligase) (TyrRS 1)
           [Mycoplasma pulmonis UAB CTIP]
 gi|81532900|sp|Q98Q81|SYY_MYCPU RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|14089899|emb|CAC13658.1| TYROSYL-TRNA SYNTHETASE 1 (TYROSINE--TRNA LIGASE) (TYRRS 1)
           [Mycoplasma pulmonis]
          Length = 414

 Score =  199 bits (506), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 127/415 (30%), Positives = 228/415 (54%), Gaps = 25/415 (6%)

Query: 12  LSERGFIHQISNPRELDILC-SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           L +R   + I++  ++D++    G+   Y+G+D TA SLH G+  Q++ L   Q  G K 
Sbjct: 13  LKKRKVFNNITSEEKVDLITLDHGI---YVGFDPTAISLHLGNYIQMVNLKRFQNVGFKT 69

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           I+++GG TS+IGDPSF+D  R+++ ++ I EN + I+    +F           +++N  
Sbjct: 70  IAILGGATSMIGDPSFKDSERKLLSNETILENKKHIRKQLENF--------GFKVIDNLD 121

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           +   +  +D LR +G FF+V+ M+S +SV +R+  +  LSF EF+Y  LQAYDF  L + 
Sbjct: 122 FYKDMNILDYLRSVGKFFNVSTMMSRDSVANRI--QSGLSFTEFSYQTLQAYDFKVLCEK 179

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKL--FALTSPLLTTASGTKMGKTLSGA-IWL 247
            +  +Q+GGSDQWGN++ G+D   +  +  L    +T  LL  ++G K+GK+  GA +W+
Sbjct: 180 ENVMMQLGGSDQWGNLVSGLDFINKTLSKNLPTIGITMNLLVDSNGNKIGKSTGGASLWI 239

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATE 305
           +K +TSPY  +QY  N +D D  +   +LT L +SEI+R+    L+  ++   +  ++ E
Sbjct: 240 DKTLTSPYVLYQYLLNTNDDDAYNLLLQLTFLQLSEIERIKNEHLKNPKLRLMQSRLSFE 299

Query: 306 ITTMVHGREEAEKAATAAMECFD-----MSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           +   +HG+EEA++A   +   F       ++  + +  +  S D V     L   +V + 
Sbjct: 300 VVKDIHGKEEAQRALHISTSLFKEKNSWFNLSLEDLIQLKGSVDFVPFKDDLFLTLVDSK 359

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
             +S  E    ++  ++KIN   ++     +  +++D+   I L  GKK + + +
Sbjct: 360 IISSKREFNEFVRDKSLKINGQDVTGLDYDLPWENYDNKYLI-LKKGKKQYWVIY 413


>gi|328860193|gb|EGG09300.1| hypothetical protein MELLADRAFT_77170 [Melampsora larici-populina
           98AG31]
          Length = 518

 Score =  199 bits (506), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 134/441 (30%), Positives = 210/441 (47%), Gaps = 64/441 (14%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D +  L  R  I Q+++      L  Q   T Y+G D TASSLH G+L  L+ L      
Sbjct: 54  DVIHKLESRQLIAQLTSRAVRQHLIDQPR-TIYLGIDPTASSLHVGNLLALIGLVHFALN 112

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIE----KIKGIFSSFIKYGT---- 118
           GHK I L+GGGT I+GDPS R   R  +    +  N+E    ++  I  S +K+      
Sbjct: 113 GHKTIVLLGGGTGIVGDPSGRSSERTSLSRSLVDSNVECLHKQVNKILDSALKHAQTRVR 172

Query: 119 -------GKTDALML----NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ 167
                   K+  + L    NN  WL  +  +D L  +G    +  ML+ +SV+ R+    
Sbjct: 173 HTDDHQDSKSPQIWLHRVKNNMEWLSGLTLLDFLGSVGKIARIASMLARDSVKQRMDSGA 232

Query: 168 SLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--------- 218
            +SF EF Y +LQAYDF +L   YDC +Q+GGSDQ+GNI+ GI++  ++ T         
Sbjct: 233 GISFTEFTYQLLQAYDFNQLRHRYDCTIQLGGSDQYGNIMSGIEIMTKIGTHQKENNQSS 292

Query: 219 --------PKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVV 270
                   P+ + +T PLL    G K GK+   A+WL+  +T P + +Q +    D+++ 
Sbjct: 293 SELVETEIPQSYGVTLPLLLNHKGEKFGKSAGNALWLSSRLTPPVDLYQAFLRTPDSEID 352

Query: 271 SFAKRLTTLPMSEIDRMAKLQGK---EINEAKKIIATEITTMVHGREEAEKAATAA---- 323
            + + LT LP+  I+R+     K   +  E +K++A EI  +VHG E   +A +A     
Sbjct: 353 KYLRMLTFLPLEVINRVMDDHQKGDRQRREPQKLLAQEIILLVHGSEGLSQALSATEILH 412

Query: 324 --------------MECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEAR 369
                          + FD S H      I +  ++V  G  + ++ V +G   S  E R
Sbjct: 413 PSKGNLSMLTTNQFQDAFDGSPHH-----IRLQSNKV-LGCSIDSIAVLSGLCKSKGEVR 466

Query: 370 RHLKSNAIKINNSIISNEKLQ 390
              +S AI +N+  + +  +Q
Sbjct: 467 SLKQSGAITVNHQPLRDNVIQ 487


>gi|118382836|ref|XP_001024574.1| tyrosyl-tRNA synthetase family protein [Tetrahymena thermophila]
 gi|89306341|gb|EAS04329.1| tyrosyl-tRNA synthetase family protein [Tetrahymena thermophila
           SB210]
          Length = 500

 Score =  198 bits (504), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 126/430 (29%), Positives = 221/430 (51%), Gaps = 52/430 (12%)

Query: 32  SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESR 91
           +Q   +AY G+D TA SLH G+L  ++ +  L   G KPI L+GG T +IGDPS + + R
Sbjct: 77  NQKQFSAYAGFDPTADSLHMGNLISILTMIRLSLLGIKPILLVGGATGLIGDPSGKTQER 136

Query: 92  RMMRSQEIQENIEKIKG--------IFSSF--------IKYGTGKTDALMLNNETWLCSI 135
            M+  +E+  N++ I+         I+S          I Y   K D  ++NN  +   +
Sbjct: 137 NMLTKEEVLSNVQGIENTLRKCTSNIYSFLEKNKQKLEIDYIPAKEDLQIINNYDFYKDM 196

Query: 136 KYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRL 195
             +D +R+IG  F +  +L+ E++ +RL  E  LS+ EF Y +LQ YDF +L  + +C +
Sbjct: 197 NILDFIRDIGKHFRMGNLLNKETIANRLNTEDGLSYTEFTYTLLQGYDFEKLFLDKNCII 256

Query: 196 QMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPY 255
           Q+GGSDQWGNI  GI+L  R    +++ +T+ L+ TA G K GK+   A+WL+   T  Y
Sbjct: 257 QVGGSDQWGNITSGIELIRRKHRAEVYGITTNLVLTAQGKKFGKSEGNALWLDPAKTKSY 316

Query: 256 NFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ----GKEINEAKKIIATEITTMVH 311
           + +QY  N+ D   +++ K  + LP+ +I+ + K      GK +  A+  +A +I  MV 
Sbjct: 317 DIFQYLINVPDQLSINYLKMFSFLPLHQIEEIEKKHMEDAGKRL--AQNTLAEQIIGMVQ 374

Query: 312 GREEA---------------------EKAATAAMECFDMSIHSQHMPTISISKDEVSRGM 350
           G  ++                     EK+ +  +E F  S + +H    ++ + ++ +  
Sbjct: 375 GDSQSAEQGAQTTAQKFFTTDFSKFNEKSESEIIEFFS-SFNEKH----TVERKDLQKYK 429

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINN---SIISNEKLQIKL-QDFDSTGNIKLSF 406
             + +I       +  E +R++++    INN   S++ ++ LQ  L ++  +   +   F
Sbjct: 430 NYIDMIGDLKLLKNKAEIKRNIENGGAYINNKRISLVDSDNLQTLLSENLLANRFLVARF 489

Query: 407 GKKNHIICHL 416
           GKKN+ +  +
Sbjct: 490 GKKNYYLIEV 499


>gi|260800994|ref|XP_002595381.1| hypothetical protein BRAFLDRAFT_119005 [Branchiostoma floridae]
 gi|229280627|gb|EEN51393.1| hypothetical protein BRAFLDRAFT_119005 [Branchiostoma floridae]
          Length = 541

 Score =  198 bits (503), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 117/322 (36%), Positives = 177/322 (54%), Gaps = 13/322 (4%)

Query: 3   AFKSDFLSILSERGFIHQI--SNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           A K++ L+ L ERG    I      EL  L   G    Y G+D TA SLH G+L  ++ L
Sbjct: 37  ATKTNILT-LHERGIFVDIFPEASIELPKLLQSGPQCVYCGFDPTADSLHIGNLLAIIGL 95

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK----- 115
              Q+ GH  I+L+GG T+ IGDPS R + R  +   ++Q NI  I+       K     
Sbjct: 96  LHCQRAGHNTIALIGGATARIGDPSGRSKEREELDLDQLQTNIRGIESTLQRVCKNHQQD 155

Query: 116 --YGTGKTDALML-NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFL 172
                 +   L + NN +W      ++ +  +G  F +  ML   SV++RLK  + +S  
Sbjct: 156 IWRSPKELPPLRIENNSSWYRQQSVVEFMSTVGRHFRMGTMLGRTSVQTRLKSAEGMSLT 215

Query: 173 EFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTA 232
           EF Y + QAYDF+ L + Y C +Q+GGSDQ GN++ G DL  ++   +++A+T PL+TT 
Sbjct: 216 EFTYQMFQAYDFLHLHREYRCLIQLGGSDQMGNMMSGHDLVRKVTGKEVYAITVPLVTTT 275

Query: 233 SGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI-DRMAKLQ 291
           SG K+GKT   A+WL+++ TSP+  +Q++    D+ + S+ K  T L M+EI D M K  
Sbjct: 276 SGEKLGKTAGNAVWLSRDKTSPFELYQFFIRQPDSIMESYLKLFTFLSMTEIADIMRKHS 335

Query: 292 GKEINE-AKKIIATEITTMVHG 312
               N  A+K +A ++T +VHG
Sbjct: 336 NHPENRLAQKKLAEQVTILVHG 357


>gi|164660650|ref|XP_001731448.1| hypothetical protein MGL_1631 [Malassezia globosa CBS 7966]
 gi|159105348|gb|EDP44234.1| hypothetical protein MGL_1631 [Malassezia globosa CBS 7966]
          Length = 499

 Score =  197 bits (502), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 132/444 (29%), Positives = 216/444 (48%), Gaps = 64/444 (14%)

Query: 37  TAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRS 96
           T Y G D +A SLH G+L  L+ L      GHK + L+GG T  IGDPS R   R  + +
Sbjct: 53  TIYSGVDPSAPSLHVGNLLPLVALLHCAIYGHKALVLIGGATGAIGDPSGRSSERSALGT 112

Query: 97  QEIQENIEKIKG-IFSSF-----------------IKYGTGKT-------------DALM 125
            ++  N+  I+  IF  F                 + +G+                D  +
Sbjct: 113 DQLTSNVTTIRAQIFQFFHNAAAYLSRRNILHAEPVLFGSCNQQSWENECLFQTALDIQL 172

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ------SLSFLEFNYMIL 179
           +NN  W   IK +D L  +G +  VN M++ +SV+SRL   +       LSF EF+Y ++
Sbjct: 173 VNNLDWFRDIKMLDFLSSVGRYVRVNDMMARDSVKSRLFPSEGGPATTGLSFTEFSYQLM 232

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER---------------LKTPKLFAL 224
           QAYD+  L +   C +Q+GGSDQ GNI+ GIDL  R               ++    + L
Sbjct: 233 QAYDYCYLHERMGCSVQLGGSDQMGNIMAGIDLIRRQRAAHVQNDKMSDLSMRADPAYGL 292

Query: 225 TSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI 284
           T PLL T+SG K GK+   A+W++  + S  +F+QY+    DADV  +   LT +P+ EI
Sbjct: 293 TLPLLMTSSGVKFGKSAGNAVWISPALLSDLDFYQYFVRSADADVERYLTSLTFMPLEEI 352

Query: 285 DRMAKLQGKEINE--AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI--- 339
            ++  L  ++ ++  A+  +A E+T +V G +   +A  A    FD  +++  +  I   
Sbjct: 353 KQVMILHSQDRSKRVAQICLANEMTELVRGPDALRRAQLATKVLFDTDVNALTLEQILYA 412

Query: 340 -----SISKDEVSRGMGLLTLIVKAGFATSTNEARRHLK--SNAIKINNSIISNEKLQIK 392
                 + +   ++ M LL L  + G  +S +EARR ++  S+ + +NN  + + + +++
Sbjct: 413 FEGDPRLVRLTETQTMDLLRLAAEIGLVSSRSEARRLVQQGSSGLYVNNVPVKDVQAKLE 472

Query: 393 LQDFDSTGNIKLSFGKKNHIICHL 416
            +   +     +  GK NH I  L
Sbjct: 473 PEHLLNGQFFVMRAGKSNHKIVVL 496


>gi|291320732|ref|YP_003515997.1| tyrosyl tRNA synthetase [Mycoplasma agalactiae]
 gi|290753068|emb|CBH41044.1| Tyrosyl tRNA synthetase 1 [Mycoplasma agalactiae]
          Length = 411

 Score =  197 bits (501), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 119/395 (30%), Positives = 210/395 (53%), Gaps = 33/395 (8%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + L  L ER  +  ISN  +   L S      Y+G+D TA SLH G+   + +L   ++ 
Sbjct: 2   NILKDLEERLILKDISNKDKFANL-SPSTTGVYVGFDPTAESLHLGNYILISVLLRFKEY 60

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           G K  +++GG T +IGDPSF+D  R ++ ++ + +N  KIK    SF        D  ++
Sbjct: 61  GFKTYAVLGGATGMIGDPSFKDSERVLLDNESVNKNKSKIKAQLESF--------DLEVI 112

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           +N  +   +  ++ LR +G   +V+ M++ ESV+ R+++   LSF EF Y +LQ +DF++
Sbjct: 113 DNYDFYKDMNVLEFLRNVGKLVNVSYMMAKESVQKRIQK--GLSFTEFTYQLLQGFDFLK 170

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK--LFALTSPLLTTASGTKMGK-TLSG 243
             +    ++Q+GGSDQWGNI+ GID+  ++   K     +T  LL+  +G K+GK T  G
Sbjct: 171 TYQELGIKVQLGGSDQWGNIVTGIDMISKVVGDKHEAVGVTVNLLSDENGKKIGKSTGGG 230

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKI 301
           A+W++K M SP+  +QY  + +D+ +       +   +SEI+ + +         EA++ 
Sbjct: 231 ALWIDKNMCSPFKMYQYLLSQNDSRIKELLYWFSFKSVSEINEVLEKHFANPSAQEAQRF 290

Query: 302 IATEITTMVHGREEAEKAA------------TAAMECFDMSIHSQHMPTISISKDEVSRG 349
           +A+E+   + G  E ++A             T+ +   D+ I   ++PT  I      +G
Sbjct: 291 LASEVVENIFGANELKQAKNITKILFDKSFDTSVLTLNDLEIIENYLPTCPI-----KQG 345

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSII 384
             ++  ++K  F +S  EAR  +++ A+KI+N  I
Sbjct: 346 DSVIETLIKNKFISSNREAREFIQAKALKIDNKEI 380


>gi|13357674|ref|NP_077948.1| tyrosyl tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           700970]
 gi|170761932|ref|YP_001752200.1| tyrosyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           27815]
 gi|171920426|ref|ZP_02691049.2| tyrosyl-tRNA synthetase [Ureaplasma parvum serovar 1 str. ATCC
           27813]
 gi|183508734|ref|ZP_02689892.2| tyrosyl-tRNA synthetase [Ureaplasma parvum serovar 14 str. ATCC
           33697]
 gi|186701925|ref|ZP_02554437.2| tyrosyl-tRNA synthetase [Ureaplasma parvum serovar 6 str. ATCC
           27818]
 gi|81549680|sp|Q9PR27|SYY_UREPA RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|189029780|sp|B1AIA6|SYY_UREP2 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|11271047|pir||H82931 tyrosyl tRNA synthetase UU117 [imported] - Ureaplasma urealyticum
 gi|6899074|gb|AAF30523.1|AE002112_4 tyrosyl tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           700970]
 gi|168827509|gb|ACA32771.1| tyrosyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           27815]
 gi|171902871|gb|EDT49160.1| tyrosyl-tRNA synthetase [Ureaplasma parvum serovar 1 str. ATCC
           27813]
 gi|182675661|gb|EDT87566.1| tyrosyl-tRNA synthetase [Ureaplasma parvum serovar 14 str. ATCC
           33697]
 gi|186700667|gb|EDU18949.1| tyrosyl-tRNA synthetase [Ureaplasma parvum serovar 6 str. ATCC
           27818]
          Length = 415

 Score =  196 bits (499), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 132/420 (31%), Positives = 221/420 (52%), Gaps = 34/420 (8%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R  I+ I+N  +L I   +     Y+G+D +A SLH G+   +MLL   +    K +
Sbjct: 8   LKARNLINNITNEEKL-IKALEKNKGIYVGFDPSADSLHLGNYIMIMLLKRFRLYNIKTL 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPS +   R ++    +++NI KIK     F       T++ ++NN  +
Sbjct: 67  ALVGGATGMIGDPSGKSAERNLLDKTILEKNIAKIKFQLEKF-------TNSQVINNYVF 119

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
             ++ ++D LR++G   ++N +L  E + SRL     +S+ EF+Y +LQ YDF++L KN 
Sbjct: 120 YENMTFLDFLRDVGKLININYLLEKEIINSRL--SVGISYTEFSYNLLQGYDFLQLYKND 177

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFA--LTSPLLTTASGTKMGKTLSGAIWLNK 249
           +  +Q GGSDQWGNI  GI++  +       A  LT  LLT + G K GK+  GAI+L++
Sbjct: 178 NIAIQAGGSDQWGNITTGIEMIRKNLGDDNIACGLTINLLTNSEGKKFGKSEKGAIYLDE 237

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKKIIATEIT 307
             ++ Y  +Q+  N  DADV      LT + + EI ++  A      +  A+K +A  + 
Sbjct: 238 NKSTVYEMYQFLINQSDADVEKLLNFLTLIDVEEIKKIMQAHKNNPALRVAQKALAKAVV 297

Query: 308 TMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIV 357
             +HG+++ E+A   +   F+ SI +          + +P   + KDE+     ++ L+ 
Sbjct: 298 VDIHGQQKYEQALHISEVLFNGSISTLNQEELEIAIKSLPATKLDKDEIK----IIDLLN 353

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF---GKKNHIIC 414
            A  ++S   AR  L + +I IN+  I++E   +K QD     N K S    GK+N+ + 
Sbjct: 354 LANISSSNRIARDFLNTGSILINDIKINDENFLVKKQD---AINQKFSIIRKGKRNYFLI 410


>gi|114645375|ref|XP_001135134.1| PREDICTED: hypothetical protein isoform 1 [Pan troglodytes]
          Length = 456

 Score =  195 bits (496), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 134/416 (32%), Positives = 201/416 (48%), Gaps = 31/416 (7%)

Query: 15  RGFIHQISNPRELDILCSQGVV----TAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           + F  +     EL  L  +G      T Y G+D TA SLH GHL  L+ LF LQ+ GH  
Sbjct: 49  KDFFPETGTKIELPELFDRGTASFPQTIYCGFDPTADSLHVGHLLALLGLFHLQRAGHNV 108

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           I+L+GG T+ +GDPS                 +E +          G       +L+N  
Sbjct: 109 IALVGGATARLGDPS--------------GLGLEALAANHQQLFTDGRSWGSFTVLDNSA 154

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           W    + +D L  +G  F +  +LS +SV+ RLK  + +S  EF Y +LQAYDF  L + 
Sbjct: 155 WYQKQRLVDFLAAVGGHFRMGTLLSRQSVQLRLKSPEGMSLAEFFYQVLQAYDFYYLFQR 214

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKE 250
           Y CR+Q+GGSDQ GNI+ G +   +L    +F +T PL+T+ +G K+GK+   A+WLN++
Sbjct: 215 YGCRVQLGGSDQLGNIMSGYEFINKLTGEDVFGITVPLITSTTGAKLGKSAGNAVWLNRD 274

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATEITT 308
            TSP+  +Q++    D  V  + K  T LP+ EID + +L  KE      +K +A E+T 
Sbjct: 275 KTSPFELYQFFVRQPDDSVERYLKLFTFLPLPEIDHIMQLHVKEPERRGPQKRLAAEVTK 334

Query: 309 MVHGREEAEKAATAAMECFDMSIHS------QHMPTI----SISKDEVSRGMGLLTLIVK 358
           +VHGRE  + A       +  SI +      Q +  +      S+  +  G  +L    K
Sbjct: 335 LVHGREGLDSAKRCTQALYHSSIDALEVMSDQELKELFKEAPFSEFFLDPGTSVLDTCRK 394

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISN-EKLQIKLQDFDSTGNIKLSFGKKNHII 413
           A          R +    + IN+  ++N E + I  Q     G   L  GK+N  I
Sbjct: 395 ANAIPDGPRGYRMITEGGVSINHQQVTNPESVLIVGQHILKNGLSLLKIGKRNFYI 450


>gi|68483513|ref|XP_714317.1| likely mitochondrial tyrosyl-tRNA synthetase [Candida albicans
           SC5314]
 gi|68484079|ref|XP_714042.1| likely mitochondrial tyrosyl-tRNA synthetase [Candida albicans
           SC5314]
 gi|46435567|gb|EAK94946.1| likely mitochondrial tyrosyl-tRNA synthetase [Candida albicans
           SC5314]
 gi|46435873|gb|EAK95246.1| likely mitochondrial tyrosyl-tRNA synthetase [Candida albicans
           SC5314]
          Length = 501

 Score =  193 bits (491), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 109/296 (36%), Positives = 171/296 (57%), Gaps = 25/296 (8%)

Query: 39  YIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQE 98
           Y G D TASSLH G+L  LM+L   + +G+  + L+GG T ++GDPS R   R  +   E
Sbjct: 85  YCGADPTASSLHLGNLLPLMVLLHFKMSGNDVVGLVGGATGLVGDPSGRKTERNKIDEVE 144

Query: 99  IQENIEKIKGIFSSF----IKYGTGKT--------DALMLNNETWLCSIKYIDLLREIGS 146
           +++N+ KI+   S+F    I+Y   +         D   +NN +W  ++K ++ L   G 
Sbjct: 145 VEDNVTKIQRQISTFLSNGIEYAKSRQFPMTEKVGDTTSVNNASWWENVKMLEFLATYGR 204

Query: 147 FFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNI 206
              V+ ML+ +S++SRL+    + F EF Y ILQAYDF  L K+ +  +Q+GG+DQWGNI
Sbjct: 205 HIRVSSMLARDSIQSRLE-SGGIGFNEFTYQILQAYDFWHLYKDENVNMQVGGNDQWGNI 263

Query: 207 ICGIDLGERL-----KTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYW 261
             GIDL  RL     K  + + LT PLLTT+SG K GK+   A++++  +T+PY  +QY+
Sbjct: 264 TAGIDLISRLKKFHGKKHEAYGLTVPLLTTSSGEKFGKSAGNAVFIDSSLTTPYQMYQYF 323

Query: 262 RNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE-----AKKIIATEITTMVHG 312
            N+ D  V    K  T LP++ I+   +L  K  ++     A++++A E+  ++HG
Sbjct: 324 INVPDDIVGKLLKVFTLLPLNVIE--GELLPKHNSDPGLRIAQRVLAREVVDLIHG 377


>gi|315051842|ref|XP_003175295.1| tyrosyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
 gi|311340610|gb|EFQ99812.1| tyrosyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
          Length = 597

 Score =  193 bits (491), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 129/353 (36%), Positives = 185/353 (52%), Gaps = 32/353 (9%)

Query: 5   KSDFLSILSERGFIHQI--SNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
           K  FLS + ERG IH +   +   LD + +   V  Y G D TA S+H GH+   M+L W
Sbjct: 20  KQSFLSFMEERGLIHSVIGGDRDALDKMITNKRVGLYAGIDPTAPSMHVGHMLPFMILGW 79

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMM----RSQEIQENIEKIKGIFSSFIKYGT 118
               G K + L+GG TS +GDP+ R  +R ++    R   I     ++K + +SF +YG 
Sbjct: 80  AYVHGMKSVWLLGGSTSRVGDPTGRTTARPLLSNASRKAYIANMHMQLKKLGASFERYG- 138

Query: 119 GKTD--------ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLS 170
           GK            + NN TW      ID+L  +G    +  ML  E V++RL+    +S
Sbjct: 139 GKHGYSWEWAWRRALENNNTWWNKETLIDVLGTLGQHARIGTMLGREPVKTRLESGSGMS 198

Query: 171 FLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGID-LGERLKT----------P 219
           F EF Y I+QA+D+  L +     +Q+GGSDQ GNI  GID + + LKT          P
Sbjct: 199 FTEFCYPIMQAWDWWHLYQK-GVMIQVGGSDQSGNIQFGIDTIKQVLKTSPIETKPGEDP 257

Query: 220 KL---FALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRL 276
           +L   F LT PLLTT++G K+GK+   +IWL+K+MTS Y+ +QY+    D D+    K  
Sbjct: 258 ELSMPFGLTVPLLTTSTGEKIGKSAGNSIWLDKDMTSTYDLYQYFMRQPDQDMERLLKMF 317

Query: 277 TTLPMSEIDRMAKLQGKEINE--AKKIIATEITTMVHGREEAEKAATAAMECF 327
           T LP   I  + +   KE +   A+  +A E   +VHG +EAE A+ A    F
Sbjct: 318 TFLPTVRIHEIIEEHNKEPSRRIAQHALAQEFVELVHGPKEAEDASKAHKAIF 370


>gi|255727496|ref|XP_002548674.1| hypothetical protein CTRG_02971 [Candida tropicalis MYA-3404]
 gi|240134598|gb|EER34153.1| hypothetical protein CTRG_02971 [Candida tropicalis MYA-3404]
          Length = 500

 Score =  193 bits (490), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 106/296 (35%), Positives = 173/296 (58%), Gaps = 25/296 (8%)

Query: 39  YIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQE 98
           Y G D TA SLH G+L  LM+L   +  G+  + L+GG T ++GDPS R   R  +  ++
Sbjct: 84  YCGADPTAESLHLGNLLPLMVLLHFRMRGNDVVGLVGGATGLVGDPSGRKTERNPLGGEQ 143

Query: 99  IQENIEKIKGIFSSF----IKYGTGK----TDAL----MLNNETWLCSIKYIDLLREIGS 146
           + +N+ KI+   S+F    I+Y   +    TD++     +NN +W   +K ++ L   G 
Sbjct: 144 VDDNVSKIQNQISTFLSNGIEYAKSRQFPMTDSIGETTSVNNASWWADVKMLEFLATYGR 203

Query: 147 FFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNI 206
              V+ ML+ +S+ SRL+    + F EF Y ILQAYDF  L K+++  +Q+GG+DQWGNI
Sbjct: 204 HIRVSAMLARDSISSRLE-SGGIGFNEFTYQILQAYDFWHLYKDHNVNMQVGGNDQWGNI 262

Query: 207 ICGIDLGERLKTP-----KLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYW 261
             G+DL  R+K       + + +T PLLTTASG K GK+   A++++ ++T+PY  +QY+
Sbjct: 263 TAGVDLISRIKKSFGKDKEAYGVTVPLLTTASGEKFGKSAGNAVFIDSKLTTPYQMYQYF 322

Query: 262 RNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE-----AKKIIATEITTMVHG 312
            N+ D  V +  K  T LP++ I+   +L  K  ++     A++++A E+  ++HG
Sbjct: 323 INVPDDIVGTLLKVFTLLPLNVIE--GELLPKHNSDPGLRIAQRVLAREVVDLIHG 376


>gi|321309531|ref|YP_004191860.1| tyrosyl-tRNA synthetase [Mycoplasma haemofelis str. Langford 1]
 gi|319801375|emb|CBY92021.1| tyrosyl-tRNA synthetase [Mycoplasma haemofelis str. Langford 1]
          Length = 412

 Score =  192 bits (489), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 130/423 (30%), Positives = 226/423 (53%), Gaps = 30/423 (7%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           FL  L +RG +  I++  +  +   +     Y+G D TA SLH G+   L LL    + G
Sbjct: 7   FLRELKDRGLVDNITDEGKF-VSALESKRGVYLGIDPTAPSLHLGNYLGLTLLRRFIQRG 65

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HK + ++GG T+ +GDPSFR + R+ M  ++I+ N E+I+      +       +A +++
Sbjct: 66  HKVVVILGGMTASVGDPSFRSKERKKMSLEDIELNKERIRDEVKRVL------PEANIVD 119

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N ++   ++  D +RE+ S  +++ +LS E ++ RL R   L+  EF Y + Q++DF EL
Sbjct: 120 NLSFYSDLQISDFIREMCSQVNISTLLSKEFLKDRLSR--GLTLAEFVYPLFQSWDFYEL 177

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSGAI 245
            K  D R+Q+GGSDQWGNI  GIDL ++  +P  +   LT PLL  +SG K GK+ + A+
Sbjct: 178 YKGKDIRVQLGGSDQWGNITSGIDLIKKTVSPDHEAVGLTFPLLLDSSGKKFGKSENNAL 237

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
           +L++ +TSPY  +QY  N+DD  +  + ++LT + +SEI+ +      +    K  +  E
Sbjct: 238 FLDQNLTSPYVVFQYLINLDDKLIPDYLRKLTFINLSEIESLVSTSSPQ--NLKFTLIWE 295

Query: 306 ITTMVHGREEAEKAATAAMECF----------DMSIHSQHMPTISISKDEVSRGMGLLTL 355
           I   ++  +  EK    +   F          D+ +    +PT+   K+ V+  + L  L
Sbjct: 296 IFKHIYDHDTFEKIKRVSGVLFGKGSEDLKSGDLLLVEGSIPTV-YYKESVNLSIALKDL 354

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH-IIC 414
               GF++S +E +R + SN+I + N  +++    +  +     G + L  GKK+  ++C
Sbjct: 355 ----GFSSSNSETKRLVSSNSIFLFNKCLTDWNTTLD-ESISKDGYLILRKGKKSFGLVC 409

Query: 415 HLC 417
             C
Sbjct: 410 FRC 412


>gi|260942949|ref|XP_002615773.1| hypothetical protein CLUG_04655 [Clavispora lusitaniae ATCC 42720]
 gi|238851063|gb|EEQ40527.1| hypothetical protein CLUG_04655 [Clavispora lusitaniae ATCC 42720]
          Length = 524

 Score =  192 bits (489), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 112/315 (35%), Positives = 168/315 (53%), Gaps = 35/315 (11%)

Query: 39  YIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQE 98
           Y G D TA SLH G+L  LM+L      GH  + L+GG T ++GDPS R   R  M + +
Sbjct: 93  YCGADPTAESLHLGNLLPLMVLLHFVLRGHDVVGLVGGATGVVGDPSGRTSERSAMEAAQ 152

Query: 99  IQENIEKIKGIFSSFIKYGT----------GKTDALM-----LNNETWLCSIKYIDLLRE 143
            ++N+  I+    +F+K G            K D+ +     +NN  W  S+K +D L  
Sbjct: 153 REKNVRIIQEQIQTFLKRGIDYAKSRNIEIAKDDSKLGSIQSVNNADWWKSVKLLDFLAT 212

Query: 144 IGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQW 203
            G    V++ML+ +S+ SRL+ +Q + F EF Y ILQAYDF  L +N    LQ+GG+DQW
Sbjct: 213 YGRHIRVSQMLARDSISSRLESQQGIGFNEFTYQILQAYDFWHLFQNEGVNLQIGGNDQW 272

Query: 204 GNIICGIDLGERLKT-------------PKLFALTSPLLTTASGTKMGKTLSGAIWLNKE 250
           GNI  GIDL  RL+                 F +T PLLTT SG K GK+   A++++++
Sbjct: 273 GNITAGIDLISRLQKSTETKSKAEKEHDSSAFGITVPLLTTPSGQKFGKSAGNAVFISEK 332

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID-----RMAKLQGKEINEAKKIIATE 305
            T+P+  +Q++ N  D  V    K +T LP+  I+     +  K  G  I  A++I+A E
Sbjct: 333 STTPFQMYQFFINSQDEMVFKLLKIMTLLPLEAIETVIVPKHEKDPGLRI--AQRILARE 390

Query: 306 ITTMVHGREEAEKAA 320
           +  ++HG    ++ A
Sbjct: 391 VVDLIHGNGVGDEMA 405


>gi|326473229|gb|EGD97238.1| tyrosyl-tRNA synthetase [Trichophyton tonsurans CBS 112818]
 gi|326477691|gb|EGE01701.1| tyrosyl-tRNA synthetase [Trichophyton equinum CBS 127.97]
          Length = 597

 Score =  192 bits (488), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 128/353 (36%), Positives = 187/353 (52%), Gaps = 32/353 (9%)

Query: 5   KSDFLSILSERGFIHQI--SNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
           +  FLS++ ERG IH +   +   LD + +   V  Y G D TA S+H GH+   M+L W
Sbjct: 20  RQSFLSLMEERGLIHSVIGGDRDALDKMITNKRVGLYAGIDPTAPSMHVGHMLPFMILGW 79

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMM----RSQEIQENIEKIKGIFSSFIKYGT 118
               G K + L+GG TS +GDP+ R  +R ++    R   I     ++K + +SF +YG 
Sbjct: 80  AYVHGMKSVWLLGGSTSRVGDPTGRTTARPVLSNASRKAYIANMHMQLKKLGASFERYG- 138

Query: 119 GKTD--------ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLS 170
           GK            + NN TW      ID+L  +G    +  ML  E V++RL+    +S
Sbjct: 139 GKHGYSWEWAWRRALENNNTWWNKETLIDVLAILGQHARIGTMLGREPVKTRLESGSGMS 198

Query: 171 FLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGID-LGERLKT----------P 219
           F EF Y I+QA+D+  L +     +Q+GGSDQ GNI  GID + + LKT          P
Sbjct: 199 FTEFCYPIMQAWDWWHLYQK-GVMIQVGGSDQSGNIQFGIDTIKQVLKTSPIETKPGEDP 257

Query: 220 KL---FALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRL 276
           +L   F LT PLLTT++G K+GK+   +IWL+K+MTS Y+ +QY+    D D+    K  
Sbjct: 258 ELSMPFGLTVPLLTTSTGEKIGKSAGNSIWLDKDMTSTYDLYQYFMRQPDQDMERLLKMF 317

Query: 277 TTLPMSEIDRMAKLQGKEINE--AKKIIATEITTMVHGREEAEKAATAAMECF 327
           T LP S I  + +   K  +   A+  +A E   +VHG +EAE+A+ A    F
Sbjct: 318 TFLPTSRIPEIIEEHNKAPSRRVAQHTLAQEFVELVHGPKEAEEASKAHKAIF 370


>gi|148377992|ref|YP_001256868.1| tyrosyl-tRNA synthetase 1 [Mycoplasma agalactiae PG2]
 gi|254783618|sp|A5IZH1|SYY_MYCAP RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|148292038|emb|CAL59430.1| Tyrosyl tRNA synthetase 1 [Mycoplasma agalactiae PG2]
          Length = 411

 Score =  192 bits (488), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 119/395 (30%), Positives = 205/395 (51%), Gaps = 33/395 (8%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + L  L ER  +  ISN  +   L S      Y+G+D TA SLH G+   + +L   ++ 
Sbjct: 2   NILKDLEERLILKDISNKDKFANL-SPSTTGVYVGFDPTAESLHLGNYILISVLLRFKEY 60

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           G K  +++GG T +IGDPSF+D  R ++ ++ + +N  KIK    SF           ++
Sbjct: 61  GFKTYAVLGGATGMIGDPSFKDSERVLLDNESVNKNKSKIKAQLESF--------GLEVI 112

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           +N  +   +  ++ LR +G   +V+ M++ ESV+ R+++   LSF EF Y +LQ +DF++
Sbjct: 113 DNYDFYKDMNVLEFLRNVGKLVNVSYMMAKESVQKRIQK--GLSFTEFTYQLLQGFDFLK 170

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK--LFALTSPLLTTASGTKMGK-TLSG 243
             +    ++Q+GGSDQWGNI+ GID+  ++   K     +T  LL+  +G K+GK T  G
Sbjct: 171 TYQELGVKVQLGGSDQWGNIVTGIDMISKVVGDKHEAVGVTVNLLSDENGKKIGKSTGGG 230

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKI 301
           A+W++K M SP+  +QY  +  D+ +       +   +SEI+ + +         EA++ 
Sbjct: 231 ALWIDKNMCSPFKMYQYLLSQKDSRIKELLYWFSFKSVSEINEVLEKHFANPSTQEAQRF 290

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMS------------IHSQHMPTISISKDEVSRG 349
           +A+E+   + G  E ++A       FD S            I   ++PT  I      +G
Sbjct: 291 LASEVVENIFGANELKQAKNITKILFDKSFDASVLTLNDLEIIENYLPTCPI-----RQG 345

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSII 384
             ++  ++K  F  S  EAR  +++ A+KI+N  I
Sbjct: 346 DSVIETLIKNKFIVSNREAREFIQAKALKIDNKEI 380


>gi|77414929|ref|ZP_00791029.1| tyrosyl-tRNA synthetase [Streptococcus agalactiae 515]
 gi|77159020|gb|EAO70231.1| tyrosyl-tRNA synthetase [Streptococcus agalactiae 515]
          Length = 300

 Score =  191 bits (486), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 105/302 (34%), Positives = 165/302 (54%), Gaps = 13/302 (4%)

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M+NN  W  +I +ID LR++G +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF
Sbjct: 1   MVNNYDWFSNISFIDFLRDVGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDF 58

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
            EL KNY+  LQ+GGSDQWGN+  G +L  R        +T PL+T ++G K GK+   A
Sbjct: 59  YELNKNYNVTLQIGGSDQWGNMTAGTELIRRKSNGVSHVMTVPLITDSTGKKFGKSEGNA 118

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE---AKKI 301
           +WL+ + TSPY  +Q+W N+ DAD V F K  T L + EI+ + ++Q +E      A+K 
Sbjct: 119 VWLDADKTSPYEMYQFWLNVMDADAVRFLKIFTFLSLKEIEDI-RIQFEEAPHQRLAQKT 177

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIH-------SQHMPTISISKDEVSRGMGLLT 354
           +A E+ T+VHG +  ++A     + F  +I         Q +  +     +    + ++ 
Sbjct: 178 LAREVVTLVHGEKAYKEAVNITEQLFAGNIKGLSVKELKQGLRGVPNYHVQTEDNLNIID 237

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           L+V +G   S  +AR  + + AI IN   I + +  I   D        +  GKK + + 
Sbjct: 238 LLVTSGVVNSKRQAREDVSNGAIYINGDRIQDLEYTISENDKLENEITVIRRGKKKYFVL 297

Query: 415 HL 416
           + 
Sbjct: 298 NF 299


>gi|241956354|ref|XP_002420897.1| tyrosine-tRNA ligase, putative; tyrosyl-tRNA synthetase,
           mitochondrial precursor, putative [Candida dubliniensis
           CD36]
 gi|223644240|emb|CAX41050.1| tyrosine-tRNA ligase, putative [Candida dubliniensis CD36]
          Length = 501

 Score =  191 bits (485), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 109/298 (36%), Positives = 172/298 (57%), Gaps = 29/298 (9%)

Query: 39  YIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQE 98
           Y G D TASSLH G+L  LM+L   + +G+  + L+GG T ++GDPS R   R  +   E
Sbjct: 85  YCGADPTASSLHLGNLLPLMVLLHFKMSGNDVVGLVGGATGLVGDPSGRKTERNKIDEVE 144

Query: 99  IQENIEKIKGIFSSFIKYGT--------------GKTDALMLNNETWLCSIKYIDLLREI 144
           +++N+ KI+   S+F+  G               G+T +  +NN +W  ++K ++ L   
Sbjct: 145 VEDNVTKIQRQISTFLSNGIEYAKSRQFPMTEKLGETTS--VNNASWWENVKMLEFLAVY 202

Query: 145 GSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWG 204
           G    V+ ML+ +S++SRL+    + F EF Y ILQAYDF  L K+ +  +Q+GG+DQWG
Sbjct: 203 GRHIRVSSMLARDSIQSRLE-SGGIGFNEFTYQILQAYDFWHLYKDENVNMQVGGNDQWG 261

Query: 205 NIICGIDLGERL-----KTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQ 259
           NI  GIDL  RL     K  + + LT PLLTT+SG K GK+   A++++  +T+PY  +Q
Sbjct: 262 NITAGIDLISRLRKFHDKKHEAYGLTVPLLTTSSGEKFGKSAGNAVFIDSNLTTPYQMYQ 321

Query: 260 YWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE-----AKKIIATEITTMVHG 312
           Y+ N+ D  V    K  T LP++ I+   +L  K  ++     A++++A E+  ++HG
Sbjct: 322 YFINVPDDIVGKLLKVFTLLPLNVIE--GELLPKHNSDPGLRIAQRVLAREVVDLIHG 377


>gi|213409600|ref|XP_002175570.1| tyrosyl-tRNA synthetase [Schizosaccharomyces japonicus yFS275]
 gi|212003617|gb|EEB09277.1| tyrosyl-tRNA synthetase [Schizosaccharomyces japonicus yFS275]
          Length = 444

 Score =  191 bits (485), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 127/449 (28%), Positives = 215/449 (47%), Gaps = 45/449 (10%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           MP F+      LS RG + Q +      +  S  +   Y G D TA+SLH G+L   M L
Sbjct: 1   MPVFQP-LWKQLSLRGLVAQTAR-----VQASTNITGVYTGVDPTANSLHLGNLVAFMPL 54

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKG----------IF 110
           F     G    +L+G  T+ +GDP+ R ESR  +  +   EN   +             +
Sbjct: 55  FHAYLNGFPSFALVGDATAQLGDPTGRTESRTRLSKRVFSENTSALVNQLSFLSQRVVSY 114

Query: 111 SSFIKYGTGKT----DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE 166
           + +  Y T  T    +  ++ N +W   +  +D L +IGS   VN+ML+ +SV SRL+  
Sbjct: 115 ARYCDYSTTDTPDERNWHIVQNSSWYSGMGLLDFLNKIGSTARVNQMLARDSVSSRLRSP 174

Query: 167 QSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER-LKTPKLFALT 225
             LSF EF Y +LQAYDF  LA + +  LQ+GG+DQWGN+  G+D   R L   K FALT
Sbjct: 175 TGLSFSEFTYQLLQAYDFYYLATHSNVNLQIGGNDQWGNVTAGVDFVHRKLGDNKAFALT 234

Query: 226 SPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID 285
           +PLLTT++G K GK+   A+W++K  T  Y  +Q++ ++ D  +    K+LT L +  I 
Sbjct: 235 TPLLTTSNGVKFGKSTGNAVWIDKTKTDAYALYQFFVSLPDKMIPILLKQLTFLSVERIG 294

Query: 286 RMAKLQGKEINEA--KKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQ--HMP---- 337
            + +   ++  +    + +A+ +   +HG++  + A   +   +    ++Q  + P    
Sbjct: 295 ELEQQHSRKPEDRLLHRALASHVVYFLHGKDAVDTAIKVSNILYASKRNAQGFYWPPEPD 354

Query: 338 -------------TISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSII 384
                        +  +      + + +  L+ + G   S  EA   +++  + + N I+
Sbjct: 355 YGNHSLKDLLQKTSAFVKIPRAIQSLPVCRLLRECGLFNSRKEASDCIENGKVMLGNEIL 414

Query: 385 SNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            +  L   + +F     + L FGKK + +
Sbjct: 415 KDSNL---ITNFPPESLVCLRFGKKAYAL 440


>gi|327296445|ref|XP_003232917.1| tyrosyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
 gi|326465228|gb|EGD90681.1| tyrosyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
          Length = 597

 Score =  191 bits (484), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 128/353 (36%), Positives = 184/353 (52%), Gaps = 32/353 (9%)

Query: 5   KSDFLSILSERGFIHQI--SNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
           +  FLS + ERG IH +   +   LD L +   V  Y G D TA S+H GH+   M+L W
Sbjct: 20  RQSFLSFMEERGLIHSVIGGDRDALDKLITNKRVGLYAGIDPTAPSMHVGHMLPFMILGW 79

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMM----RSQEIQENIEKIKGIFSSFIKYGT 118
               G K + L+GG TS +GDP+ R  +R ++    R   I     ++K + +SF +YG 
Sbjct: 80  AYVHGMKSVWLLGGSTSRVGDPTGRTTARPVLSNASRKAYIANMHMQLKKLGASFERYG- 138

Query: 119 GKTD--------ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLS 170
           GK            + NN TW      ID+L  +G    +  ML  E V++RL+    +S
Sbjct: 139 GKHGYSWEWAWRRALENNNTWWNKETLIDVLGTLGQHARIGTMLGREPVKTRLESGSGMS 198

Query: 171 FLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGID-LGERLKT----------P 219
           F EF Y I+QA+D+  L +     +Q+GGSDQ GNI  GID + + LKT          P
Sbjct: 199 FTEFCYPIMQAWDWWHLYQK-GVMIQVGGSDQSGNIQFGIDTIKQVLKTSPIETKPGEDP 257

Query: 220 KL---FALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRL 276
            L   F LT PLLTT++G K+GK+   +IWL+K+MTS Y+ +QY+    D D+       
Sbjct: 258 DLSMPFGLTVPLLTTSTGEKIGKSAGNSIWLDKDMTSTYDLYQYFMRQPDQDMERLLNMF 317

Query: 277 TTLPMSEIDRMAKLQGKEINE--AKKIIATEITTMVHGREEAEKAATAAMECF 327
           T LP S I  + +   K  +   A+  +A E   +VHG +EAE+A+ A    F
Sbjct: 318 TFLPTSRIPEIIEEHNKAPSRRVAQHTLAQEFVELVHGPKEAEEASKAHKAIF 370


>gi|115397901|ref|XP_001214542.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
 gi|114192733|gb|EAU34433.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
          Length = 608

 Score =  191 bits (484), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 117/375 (31%), Positives = 195/375 (52%), Gaps = 30/375 (8%)

Query: 5   KSDFLSILSERGFIHQISNPREL-DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           +  F+  L ERG IH +   R+L   + ++  V  Y G D TA S+H GH+   M+L W 
Sbjct: 85  RKSFVEHLEERGLIHDVVGERDLLHRVFTEKRVGMYAGIDPTAPSMHVGHMLPFMVLAWG 144

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIE----KIKGIFSSFIKYGTG 119
              G     L+GG TS IGDP+ R + R  + S   + N+     ++K + +S  +YG  
Sbjct: 145 YVWGLPVTFLLGGSTSRIGDPTGRLKGREQVHSSVRKANMASMHMQLKKLGASIERYGKR 204

Query: 120 KT-------DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFL 172
                       ++NN TW   + ++++LR++GS   +  ML  E+V++R+ +   +SF 
Sbjct: 205 HGYEKKWIWKRALVNNNTWWNKVPFLEVLRDLGSHTRLGPMLGRETVKNRMAKGDGMSFA 264

Query: 173 EFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGID---------LGERLKTP---- 219
           EF Y ILQ +D+  + +N   ++Q+GGSDQ+GNI+ G+D         + E+ + P    
Sbjct: 265 EFAYPILQGWDWWTMFRN-GVQVQVGGSDQYGNILFGMDAVKAISKNTVMEQQQDPLEND 323

Query: 220 --KLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT 277
             K    T+PLLT  SG K GK+   AIWL+K+MTS +  +Q++    D  V  + K  T
Sbjct: 324 LDKPIGFTTPLLTAPSGEKFGKSAGNAIWLDKDMTSTFELYQFFVRTPDDAVERYLKMFT 383

Query: 278 TLPMSEIDRMAKLQGKEINE--AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQH 335
            +P+ EI ++ + Q ++ ++  A+  +A E   ++HG+EEA+  A    + F     +  
Sbjct: 384 FIPLPEIAKIMEQQNQDPSKRVAQHALAYEFVELIHGKEEADAVALQHRQLFRPRSSTAE 443

Query: 336 MPTISISKDEVSRGM 350
              +  +    SR M
Sbjct: 444 PTPLGPTTSPQSRAM 458


>gi|119180367|ref|XP_001241661.1| hypothetical protein CIMG_08824 [Coccidioides immitis RS]
          Length = 635

 Score =  190 bits (483), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 122/347 (35%), Positives = 184/347 (53%), Gaps = 32/347 (9%)

Query: 5   KSDFLSILSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           K  FLS L ERG ++ +   R+ LD L ++  V  Y G D TA SLH GH+   M+L W 
Sbjct: 79  KQSFLSFLEERGLVNSVVGQRDALDKLITRKRVGFYAGVDPTAPSLHIGHMLPFMILGWA 138

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKI----KGIFSSFIKYGTG 119
              G K + L+GG T+ IGDP+ R E R +M     + NI  I    K +  SF KYG  
Sbjct: 139 YVHGLKAVFLIGGSTAKIGDPTGRLEGRPLMDGATRRANIANIHLQLKRLGFSFEKYGRK 198

Query: 120 KT-------DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFL 172
                       + NN TW       +++  +G+   +  ML  + V+SRL   + +S  
Sbjct: 199 HGFEWEWAWRRALENNNTWWNKQSLKEVMEVLGTSLRLGPMLGRDYVKSRLASGEGMSIA 258

Query: 173 EFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL--------------GERLKT 218
           EF Y I+Q +DF  L +    ++Q+GGSDQ+GNI+ G+D                ++ + 
Sbjct: 259 EFCYPIMQGWDFWYLFQR-KVQVQVGGSDQYGNILFGMDAIKGILKANPESEWAPKKDED 317

Query: 219 PKL---FALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKR 275
           P L   + +T+PLLTTASG K+GK+   A+WL+K+MTS Y+ +QY+  + D+DV  + K 
Sbjct: 318 PDLANPYGITTPLLTTASGEKIGKSAGNAVWLDKDMTSCYDLYQYFVRVADSDVERYLKM 377

Query: 276 LTTLPMSEIDRMAKLQGKEINE--AKKIIATEITTMVHGREEAEKAA 320
            T +P   I  + +   K+ ++  A+  +A E   ++HG   AEKAA
Sbjct: 378 FTFVPTPAIKELMEEHAKDPSKRVAQHKLAREFVELIHGSLSAEKAA 424


>gi|294993202|ref|ZP_06798893.1| tyrosyl-tRNA synthetase [Mycobacterium tuberculosis 210]
          Length = 306

 Score =  190 bits (482), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 109/304 (35%), Positives = 175/304 (57%), Gaps = 22/304 (7%)

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
           A++ NN  W  S+  I+ LR+IG  FSVN ML+ +++R RL  E  +S+ EF+Y++LQA 
Sbjct: 1   AIVENNLEWTGSLSAIEFLRDIGKHFSVNVMLARDTIRRRLAGE-GISYTEFSYLLLQAN 59

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK-TL 241
           D+VEL + + C LQ+GG+DQWGNII G+ L  +     + ALT PL+T A GTK GK T 
Sbjct: 60  DYVELHRRHGCTLQIGGADQWGNIIAGVRLVRQKLGATVHALTVPLVTAADGTKFGKSTG 119

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAK 299
            G++WL+ +MTSPY ++QY+ N  DADV+ + +  T L   E+  +  A  Q  +   A+
Sbjct: 120 GGSLWLDPQMTSPYAWYQYFVNTADADVIRYLRWFTFLSADELAELEQATAQRPQQRAAQ 179

Query: 300 KIIATEITTMVHGREEAEKAATAAMEC-------------FDMSIHSQHMPTISISKDEV 346
           + +A+E+T +VHG     +AATAA+E               D +  +  +   ++++ + 
Sbjct: 180 RRLASELTVLVHG-----EAATAAVEHASRALFGRGELARLDEATLAAALRETTVAELKP 234

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
               G++ L+V +G + S   ARR +    + +NN  + NE+   +  DF     + L  
Sbjct: 235 GSPDGIVDLLVASGLSASKGAARRTIHEGGVSVNNIRVDNEEWVPQSSDFLHGRWLVLRR 294

Query: 407 GKKN 410
           GK++
Sbjct: 295 GKRS 298


>gi|119500864|ref|XP_001267189.1| tyrosyl-tRNA synthetase, mitochondrial precursor (tyrosine--tRNA
           ligase) (tyrrs) [Neosartorya fischeri NRRL 181]
 gi|119415354|gb|EAW25292.1| tyrosyl-tRNA synthetase, mitochondrial precursor (tyrosine--tRNA
           ligase) (tyrrs) [Neosartorya fischeri NRRL 181]
          Length = 602

 Score =  190 bits (482), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 127/420 (30%), Positives = 216/420 (51%), Gaps = 37/420 (8%)

Query: 5   KSDFLSILSERGFIHQISNPREL-DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           +  F+  L ERG IH +   R+L   + ++  V  Y+G D TA SLH GH+   M+L W 
Sbjct: 73  RKSFVEHLEERGLIHDVVGERDLLHRVFTEKRVGIYVGVDPTAPSLHVGHMLPFMVLAWG 132

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIE----KIKGIFSSFIKYGTG 119
              G     L+GG TS IGDP+ R + R  M S   + N+     ++K + +S  +YG  
Sbjct: 133 YVWGLPVTYLLGGATSRIGDPTGRLKGREAMDSSVRKANMASMHMQLKKLGASVEQYGKK 192

Query: 120 K---TDAL----MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFL 172
                D +    ++NN TW  S  ++++LR++G+   +  ML  E+V++R+ +   +SF 
Sbjct: 193 HGYYKDKIWRRALVNNNTWWNSTSFLEVLRDLGAHTRLGPMLGRETVKNRMTKGDGMSFA 252

Query: 173 EFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLG---------ERLKTP---- 219
           EF Y +LQA+D+  L +    ++Q+GGSDQ+GNI+ G+D           E+ + P    
Sbjct: 253 EFTYPLLQAWDWWVLFRK-GVQVQVGGSDQYGNILFGMDAVKSISKNTAIEQDRNPLEDD 311

Query: 220 --KLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT 277
             K    T+PLLT  +G K GK+   A+WL+K+MTS +  +Q++    D  V  + K  T
Sbjct: 312 LDKPIGFTTPLLTATNGEKFGKSAGNAVWLDKDMTSTFELYQFFVRTPDDVVERYLKLFT 371

Query: 278 TLPMSEIDRMAKLQGKEINE--AKKIIATEITTMVHGREEAEKAATAAMECF---DMSIH 332
            LP+ +I  + + Q K+ ++  A+  +ATE   ++HG+EEA+  A    + F     +  
Sbjct: 372 FLPLPKIADIMEEQNKDPSKRIAQHTLATEFLELIHGKEEADAVALQHRQLFRPRSSTAE 431

Query: 333 SQHMPTISISKDEVSRGMGLLTLIVKAG--FATSTNEARRHLKSNAIKINNSIISNEKLQ 390
              MP ++      +          ++G  +A  TN A  ++ S  + + +S++ N+   
Sbjct: 432 PSPMPKVTTPPSSHANSPTASYANPQSGNKYAPQTNFA--NMGSPHVTLPHSLVYNQPFH 489


>gi|56807384|ref|ZP_00365364.1| COG0162: Tyrosyl-tRNA synthetase [Streptococcus pyogenes M49 591]
          Length = 322

 Score =  189 bits (481), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 103/308 (33%), Positives = 167/308 (54%), Gaps = 25/308 (8%)

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL 163
           +KIKG  S+F+ +  G   A ++NN  W   I +ID LR++G +F+VN M+S +SV+ R+
Sbjct: 3   DKIKGQLSTFLDFENGDNKAELVNNYDWFSQISFIDFLRDVGKYFTVNYMMSKDSVKKRI 62

Query: 164 KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFA 223
             E  +S+ EF Y I+Q YDF EL   ++  LQ+GGSDQWGN+  G +L  +        
Sbjct: 63  --ETGISYTEFAYQIMQGYDFYELNDKHNVTLQIGGSDQWGNMTAGTELLRKKADKTGHV 120

Query: 224 LTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSE 283
           +T PL+T ++G K GK+   A+WL+ + TSPY  +Q+W N+ D D V F K  T L + E
Sbjct: 121 MTVPLITDSTGKKFGKSEGNAVWLDADKTSPYEMYQFWLNVMDDDAVRFLKIFTFLSLDE 180

Query: 284 IDRMAKLQGKEINE--AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISI 341
           I  +        +E  A+K +A E+ T+VHG E  ++A     + F  +I        ++
Sbjct: 181 IAEIETQFNAARHERLAQKTLAREVVTLVHGEEAYKQALNITEQLFAGNIK-------NL 233

Query: 342 SKDEVSRGM--------------GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNE 387
           S +E+ +G+               ++ ++V A  + S  +AR  +++ AI IN   + + 
Sbjct: 234 SANELKQGLSNVPNYHVQSIDNHNIVEILVAAKISPSKRQAREDVQNGAIYINGDRVQDL 293

Query: 388 KLQIKLQD 395
             Q+   D
Sbjct: 294 DYQLSNDD 301


>gi|255936395|ref|XP_002559224.1| Pc13g07980 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211583844|emb|CAP91867.1| Pc13g07980 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 611

 Score =  189 bits (481), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 114/352 (32%), Positives = 192/352 (54%), Gaps = 30/352 (8%)

Query: 5   KSDFLSILSERGFIHQISNPREL-DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           + +F   L ERG IH +   REL   + ++     Y+G D TA S+H GH+   ++L W 
Sbjct: 88  RKNFAQHLEERGLIHDVVGERELLHKVFTEKRAGLYVGIDPTAPSMHVGHMLPFLVLAWA 147

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIE----KIKGIFSSFIKYGT- 118
              G     L+GG TS +GDP+ R + R  + S   + N+     ++K + SS  +YG  
Sbjct: 148 YVWGLPVTFLLGGATSRVGDPTGRLKGRDAVHSSIRKANMASMHMQLKKLGSSIEQYGRR 207

Query: 119 -GKTDALML-----NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFL 172
            G     M      NN TW  S+ ++++LR++G+F  +  ML  ++V++RL +   +SF 
Sbjct: 208 HGHERKPMWKRALTNNNTWWNSMPFLEVLRDLGAFMRLGPMLGRDTVKTRLNQGDGMSFA 267

Query: 173 EFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL---------GERLKTP---- 219
           EF+Y ILQA+D+  L +    ++Q+GG+DQ+GNI+ G++           E+++ P    
Sbjct: 268 EFSYPILQAWDWWTLFQK-GTQIQVGGADQYGNILFGMEAVKSISRNTADEQVRNPLESE 326

Query: 220 --KLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT 277
             +    T+PLLTT SG K+GK+   A+WL+K++TS +  +QY+    D  V  + K  T
Sbjct: 327 LDRPIGFTTPLLTTPSGEKLGKSAGNAVWLDKDLTSTFELYQYFVRTPDDVVERYLKLFT 386

Query: 278 TLPMSEIDRMAKLQGKEINE--AKKIIATEITTMVHGREEAEKAATAAMECF 327
            +P+ EI  + + Q K+ ++  A+  +A E   ++HG+ EA+  A    + F
Sbjct: 387 FIPLPEIATIMEEQNKDPSKRVAQHKLAVEFVELIHGKAEADAVALQHRQLF 438


>gi|205374491|ref|ZP_03227287.1| tyrosyl-tRNA synthetase [Bacillus coahuilensis m4-4]
          Length = 329

 Score =  189 bits (481), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 102/270 (37%), Positives = 156/270 (57%), Gaps = 19/270 (7%)

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M+NN  WL ++  +  LR+ G +  VN ML+ +++ SRL  +  +SF EF Y ILQA DF
Sbjct: 1   MVNNYDWLGTMDVVTFLRDFGKYVGVNYMLAKDTIASRL--DSGISFTEFTYTILQALDF 58

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKLFALTSPLLTTASGTKMGKTLS 242
             L ++Y+C+LQ+GGSDQWGNI  G+++  + +    K F LT PL+T A GTK GKT S
Sbjct: 59  NHLYEHYNCKLQIGGSDQWGNITTGLEVIRKHQEEGAKAFGLTIPLVTKADGTKFGKTES 118

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE--INEAKK 300
           GAIWL+ E T+PY F+Q+W N  DADVV + K  T L   +I+ +A     E  + +A+K
Sbjct: 119 GAIWLDPEKTTPYEFYQFWINTADADVVKYLKFFTFLTQEDIESLAAAVETEPHLRKAQK 178

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGM 350
            +A E+T ++HG     +A       F   +            + +P+I +SK E    +
Sbjct: 179 ALAEEMTRLIHGEAALAQAQKITQALFSGDVKELTASEIEQGFKDVPSIEVSKAE---DV 235

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKIN 380
            L+ L+V+   + S  +AR  + + A+ +N
Sbjct: 236 QLIELLVETKLSPSKRQAREDISNGAVYVN 265


>gi|116182242|ref|XP_001220970.1| hypothetical protein CHGG_01749 [Chaetomium globosum CBS 148.51]
 gi|88186046|gb|EAQ93514.1| hypothetical protein CHGG_01749 [Chaetomium globosum CBS 148.51]
          Length = 708

 Score =  189 bits (481), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 116/359 (32%), Positives = 186/359 (51%), Gaps = 33/359 (9%)

Query: 11  ILSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
           +L ERG++  I+  RE +  +     V AY+G D TASSLH GHL  LM LFW+   G+ 
Sbjct: 67  MLEERGYVKDIAGSRETIREMMRLKRVKAYVGVDPTASSLHVGHLLPLMPLFWMYMHGYG 126

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKI--------KGIFSSFIKYGTGKT 121
             +L+GG T  IGDP+ R + R  +   ++  N+ K+          + +   +YG  K 
Sbjct: 127 AFTLLGGSTVKIGDPTDRLKDREPIAKADLAMNVTKVHFQLKKLWANVETQARRYGYEKE 186

Query: 122 DA---LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMI 178
            A    ++NN TW  S+  +++LR  G    +  MLS E+V+ ++     +SF EF Y I
Sbjct: 187 WAWQRAVVNNNTWWNSVTLLEVLRRAGRHMRIGPMLSRETVKRKMSEGDGMSFAEFTYPI 246

Query: 179 LQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL---------GERLKTPK------LFA 223
           +Q +D+  L      ++Q+GGSDQ+GNI+ G+D+          E  + P+         
Sbjct: 247 MQGWDWWTLFNQQKVQMQIGGSDQYGNIVAGVDIVKTVRDTEPDEARRIPRDGPIDDPAG 306

Query: 224 LTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSE 283
            T PLL  +SG K GK+   A+WL+  MTS ++ + Y+    D DV    K  T +P+  
Sbjct: 307 FTVPLLLDSSGVKFGKSAGNAVWLDHFMTSTFDLYGYFVRRPDDDVEKLLKLFTFMPLEA 366

Query: 284 IDRMAKLQGKEINE--AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS 340
           I ++   Q ++ ++  A+  +A E+ T+VHG    E+AA  A E   M  +   +P ++
Sbjct: 367 IQKVMAQQMEDPSKRVAQHCLAYEVLTLVHG----EEAAKEAREQHQMMYNKVPLPVVA 421


>gi|145257280|ref|XP_001401673.1| tyrosyl-tRNA synthetase [Aspergillus niger CBS 513.88]
 gi|134058586|emb|CAK44622.1| unnamed protein product [Aspergillus niger]
          Length = 611

 Score =  189 bits (480), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 129/417 (30%), Positives = 212/417 (50%), Gaps = 35/417 (8%)

Query: 5   KSDFLSILSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           + +F   L ERG +H +   RE LD L ++  V  Y G D TA SLH GH+   M+L W 
Sbjct: 94  RKNFAQHLEERGLLHDVVGERETLDRLFTKKRVGMYAGVDPTAPSLHVGHMLPFMILAWG 153

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIE----KIKGIFSSFIKYGT- 118
              G     L+GG T+  GDP+ R +SR  + S   + N+     ++K +  S   YG  
Sbjct: 154 YVWGLPVTFLLGGATARFGDPTGRLKSRDQVHSSVRKANMASMHMQLKKLGHSIDTYGRR 213

Query: 119 -GKTDAL----MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLE 173
            G  +      ++NN TW  S+  I+LLR++G    +  M+  ++V++RL +   +SF E
Sbjct: 214 HGYINKYWRRALVNNNTWWNSLPVIELLRDLGVHTRLGPMMGRDTVKNRLSKGDGMSFAE 273

Query: 174 FNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGID----LGERLKTP---------- 219
           F Y ++QA+D+  L +    ++Q+GGSDQ+GNI+ G+D    +G+ +  P          
Sbjct: 274 FTYPLMQAWDWWVLFQK-GVQVQVGGSDQFGNILFGMDAVKSIGKNMTDPEQQFDFKDEL 332

Query: 220 -KLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
            +   +T+PLLT  SG K GK+   A+WL+K+MTS +  +Q++    D  V  + K  T 
Sbjct: 333 SRPIGITTPLLTAPSGEKFGKSAGNAVWLDKDMTSTFELYQFFVRTPDDVVERYLKMFTF 392

Query: 279 LPMSEIDRMAKLQGKEINE--AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM 336
           LP+ EI ++ + Q K+ ++  A+  +A+E   +VHG+ EA+  A    + F   + +   
Sbjct: 393 LPLPEIAKIMEEQNKDPSKRVAQHALASEFVELVHGKVEADAVALQHRQLFRPRLSTAEP 452

Query: 337 PTI----SISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKL 389
             +    S      S   G  T      +A  TN A  ++    I +  S++ N+ L
Sbjct: 453 SPLPRKPSTGGSPQSPTAGFATQESGNPYAPQTNFA--NMPQVNITLPRSLVYNQTL 507


>gi|303321247|ref|XP_003070618.1| tyrosyl-tRNA synthetase, putative [Coccidioides posadasii C735
           delta SOWgp]
 gi|240110314|gb|EER28473.1| tyrosyl-tRNA synthetase, putative [Coccidioides posadasii C735
           delta SOWgp]
          Length = 635

 Score =  189 bits (480), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 121/347 (34%), Positives = 184/347 (53%), Gaps = 32/347 (9%)

Query: 5   KSDFLSILSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           K  FLS L ERG ++ +   R+ LD L ++  V  Y G D TA SLH GH+   M+L W 
Sbjct: 79  KQSFLSFLEERGLVNSVVGQRDALDKLITRKRVGFYAGVDPTAPSLHIGHMLPFMILGWA 138

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKI----KGIFSSFIKYGTG 119
              G K + L+GG T+ IGDP+ R E R +M     + NI  I    K +  SF KYG  
Sbjct: 139 YVHGLKAVFLIGGSTAKIGDPTGRLEGRPLMDGATRRANIANIHLQLKRLGFSFEKYGRK 198

Query: 120 KT-------DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFL 172
                       + NN TW       +++  +G+   +  ML  + V+SRL   + +S  
Sbjct: 199 HGFEWEWAWRRALENNNTWWNKQSLKEVMEVLGTSLRLGPMLGRDYVKSRLASGEGMSIA 258

Query: 173 EFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL--------------GERLKT 218
           EF Y I+Q +DF  L +    ++Q+GGSDQ+GNI+ G+D                ++ + 
Sbjct: 259 EFCYPIMQGWDFWYLFQR-KVQVQVGGSDQYGNILFGMDAIKGILKANPESEWAPKKDED 317

Query: 219 PKL---FALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKR 275
           P L   + +T+PLLTTASG K+GK+   A+WL+K+MTS Y+ +QY+  + D+DV  + K 
Sbjct: 318 PDLANPYGITTPLLTTASGEKIGKSAGNAVWLDKDMTSCYDLYQYFVRVADSDVERYLKM 377

Query: 276 LTTLPMSEIDRMAKLQGKEINE--AKKIIATEITTMVHGREEAEKAA 320
            T +P   I  + +   K+ ++  A+  +A E   ++HG   AE+AA
Sbjct: 378 FTFVPTPAIKELMEEHAKDPSKRVAQHKLAREFVELIHGSLSAEQAA 424


>gi|320035901|gb|EFW17841.1| tyrosyl-tRNA synthetase [Coccidioides posadasii str. Silveira]
          Length = 635

 Score =  189 bits (480), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 121/347 (34%), Positives = 184/347 (53%), Gaps = 32/347 (9%)

Query: 5   KSDFLSILSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           K  FLS L ERG ++ +   R+ LD L ++  V  Y G D TA SLH GH+   M+L W 
Sbjct: 79  KQSFLSFLEERGLVNSVVGQRDALDKLITRKRVGFYAGVDPTAPSLHIGHMLPFMILGWA 138

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKI----KGIFSSFIKYGTG 119
              G K + L+GG T+ IGDP+ R E R +M     + NI  I    K +  SF KYG  
Sbjct: 139 YVHGLKAVFLIGGSTAKIGDPTGRLEGRPLMDGATRRANIANIHLQLKRLGFSFEKYGRK 198

Query: 120 KT-------DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFL 172
                       + NN TW       +++  +G+   +  ML  + V+SRL   + +S  
Sbjct: 199 HGFEWEWAWRRALENNNTWWNKQSLKEVMEVLGTSLRLGPMLGRDYVKSRLASGEGMSIA 258

Query: 173 EFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL--------------GERLKT 218
           EF Y I+Q +DF  L +    ++Q+GGSDQ+GNI+ G+D                ++ + 
Sbjct: 259 EFCYPIMQGWDFWYLFQR-KVQVQVGGSDQYGNILFGMDAIKGILKANPESEWAPKKDED 317

Query: 219 PKL---FALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKR 275
           P L   + +T+PLLTTASG K+GK+   A+WL+K+MTS Y+ +QY+  + D+DV  + K 
Sbjct: 318 PDLANPYGITTPLLTTASGEKIGKSAGNAVWLDKDMTSCYDLYQYFVRVADSDVERYLKM 377

Query: 276 LTTLPMSEIDRMAKLQGKEINE--AKKIIATEITTMVHGREEAEKAA 320
            T +P   I  + +   K+ ++  A+  +A E   ++HG   AE+AA
Sbjct: 378 FTFVPTPAIKELMEEHAKDPSKRVAQHKLAREFVELIHGSLSAEQAA 424


>gi|190347206|gb|EDK39441.2| hypothetical protein PGUG_03540 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 604

 Score =  189 bits (479), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 110/308 (35%), Positives = 158/308 (51%), Gaps = 33/308 (10%)

Query: 34  GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRM 93
           G +  Y G D +A SLH G+L   M++   +  G+  + L+GG T  +GDPS R + R  
Sbjct: 173 GQLKLYCGADPSAKSLHIGNLLPFMVMLHFRLRGYDVVGLIGGATGAVGDPSGRSKERAQ 232

Query: 94  MRSQEIQENIEKIKGIFSSFIKYGT--------------GKTDALMLNNETWLCSIKYID 139
           + S E  +N+ +I+     F+  G               GK+  ++ NN  W  SI  +D
Sbjct: 233 IESDERADNVARIESQIRQFLNNGVEYARSRNYPFPGDVGKS--VVRNNADWWKSIGMLD 290

Query: 140 LLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGG 199
            L + G    V  ML+ +S++SRL  +  L F EF Y +LQAYDF EL K     LQ+GG
Sbjct: 291 FLAKYGRHIRVTNMLARDSIQSRLSSQGGLGFNEFTYQVLQAYDFWELYKTEGVNLQIGG 350

Query: 200 SDQWGNIICGIDLGERL----------KTPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
           +DQWGNI  GIDL  RL          K    + +T PLLTT SG K GK+   A++++ 
Sbjct: 351 NDQWGNITAGIDLISRLHKLEPQTKERKDKNAYGITVPLLTTPSGEKFGKSAGNAVFIDP 410

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR-----MAKLQGKEINEAKKIIAT 304
            +TSPY  +QY+    D  V    K  T LP+  +D        K  G  I  A++++A 
Sbjct: 411 SITSPYQLYQYFIQTPDEIVGKLLKVFTLLPLHSVDEHILPDHEKDPGSRI--AQRVLAR 468

Query: 305 EITTMVHG 312
           E+  +VHG
Sbjct: 469 EVVDLVHG 476


>gi|85118241|ref|XP_965416.1| tyrosyl-tRNA synthetase, mitochondrial precursor [Neurospora crassa
           OR74A]
 gi|1351183|sp|P12063|SYYM_NEUCR RecName: Full=Tyrosyl-tRNA synthetase, mitochondrial; AltName:
           Full=Tyrosine--tRNA ligase; Short=TyrRS; Flags:
           Precursor
 gi|168924|gb|AAA33620.1| tyrosyl-tRNA synthetase [Neurospora crassa]
 gi|28927224|gb|EAA36180.1| tyrosyl-tRNA synthetase, mitochondrial precursor [Neurospora crassa
           OR74A]
 gi|38566964|emb|CAE76265.1| tyrosine--trna ligase precursor, mitochondrial (cyt-18) [Neurospora
           crassa]
          Length = 669

 Score =  188 bits (478), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 120/377 (31%), Positives = 196/377 (51%), Gaps = 36/377 (9%)

Query: 5   KSDFLSILSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           K +   +  ERG++   +  +E +  L     + AY+G D TA SLH GHL  LM LFW+
Sbjct: 64  KQNTWDLFEERGYVKDTAGTKEHIAELMRTRRIGAYVGIDPTAPSLHVGHLLPLMPLFWM 123

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
              G+K  +L+GG T+ IGDP+ R +SR  + S +   N+ KI        +    +  A
Sbjct: 124 YLEGYKAFTLIGGSTAKIGDPTGRLKSRDHLSSSDATMNMTKIHYQLKKLWENVDTQMRA 183

Query: 124 L-----------MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFL 172
                       ++NN  W      +++LR +G    +  MLS ++V++++ +   +SF 
Sbjct: 184 RGYEADWARKRGIVNNNHWWNKQPMLEVLRRVGHALRIGPMLSRDTVKNKMTQGDGVSFA 243

Query: 173 EFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK------------TPK 220
           EF Y I+Q +D+ EL      ++Q+GGSDQ+GNII G+++ +  +            TPK
Sbjct: 244 EFTYPIMQGWDWFELFYQQGVQMQIGGSDQYGNIISGLEVVKAARESEPDPQERKYVTPK 303

Query: 221 L-----FALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKR 275
                    T PLLT +SG K GK+   AIWL+   TS ++F+ Y+    D +V +  K 
Sbjct: 304 TALDECVGFTVPLLTDSSGAKFGKSAGNAIWLDPYQTSVFDFYGYFVRRSDQEVENLLKL 363

Query: 276 LTTLPMSEIDRMAKLQGKEINE--AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS 333
            T +P+SEI +  +   K+ ++  A+  +A E+ T+VHG++E    A+AA +   M    
Sbjct: 364 FTFMPISEITKTMEEHIKDPSKRVAQHTLAREVVTLVHGKQE----ASAAEDQHRMMYTG 419

Query: 334 Q-HMPTISISKDEVSRG 349
           Q  +P +S +KD  + G
Sbjct: 420 QMTIPQVSRAKDAATGG 436


>gi|156306410|ref|XP_001617599.1| hypothetical protein NEMVEDRAFT_v1g157233 [Nematostella vectensis]
 gi|156194748|gb|EDO25499.1| predicted protein [Nematostella vectensis]
          Length = 214

 Score =  188 bits (478), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 92/209 (44%), Positives = 131/209 (62%), Gaps = 1/209 (0%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L  RG + Q+++  EL     QG VT Y G+D TA SLH G L  L+ L   Q  G
Sbjct: 6   LLEDLKARGLVAQMTSEEELQAHLEQGSVTLYCGFDPTADSLHIGSLVPLLTLRRFQNYG 65

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKP++L+GG T +IGDPSF+ + R++     +   +EK+K   S+FI + +G   A ++N
Sbjct: 66  HKPLALVGGATGLIGDPSFKAQERKLNDDATVAGWVEKLKAQVSAFISFDSGANSAEVVN 125

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDFVE 186
           N  W   +  +  LR++G  FSVN+M++ ESV+ R+ RE + +SF EF YMILQ+YDF +
Sbjct: 126 NLDWTQDMNILSFLRDVGKHFSVNQMIAKESVKQRIDREGEGISFTEFTYMILQSYDFQQ 185

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGER 215
           L  ++ C LQ+GGSDQWGNI  G +L  R
Sbjct: 186 LNLSHRCTLQIGGSDQWGNITGGTELTRR 214


>gi|221056076|ref|XP_002259176.1| Tyrosine--tRNA ligase [Plasmodium knowlesi strain H]
 gi|193809247|emb|CAQ39949.1| Tyrosine--tRNA ligase, putative [Plasmodium knowlesi strain H]
          Length = 519

 Score =  188 bits (477), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 136/447 (30%), Positives = 210/447 (46%), Gaps = 62/447 (13%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVV--------TAYIGYDLTASSLHAGHLTQ 56
           KS  L  L ER  IH +S+   +D +              + Y+G D+    LH G+L Q
Sbjct: 48  KSKALKKLFERKLIHYVSDIEGVDNILYHNETESKKEKRKSVYLGIDVNCKYLHLGNLLQ 107

Query: 57  LMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRR---------------------MMR 95
           LM+L  L+      + L+GG T+ IGDPSF+   RR                     ++R
Sbjct: 108 LMILDILRNHNTDIVVLLGGSTTKIGDPSFQQAERRKPIHEEISENEESIKGNIIRLLLR 167

Query: 96  SQEIQENIEKIKG--------IFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSF 147
            +E+  N+    G            F  +   K    ++NN  W   +   D L   G +
Sbjct: 168 GEEL--NVGTSPGGKYDMGGNTQDEFSIHRPNKGSLTIVNNRQWYKQMDLADFLIH-GQY 224

Query: 148 FSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNII 207
           F+++++L  E  + +LK   +L+  + NY+ILQ+YDFV L K Y C +Q+GGSDQWGNI 
Sbjct: 225 FALHKILKKECFKDKLK-GNNLTLKDLNYLILQSYDFVHLYKKYRCFIQIGGSDQWGNIQ 283

Query: 208 CGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL-----SGAIWLNKEMTSPYNFWQYWR 262
            GI+L + L   +L+ LTS LL   + TK  K+L        IW++KE T P+ FW + R
Sbjct: 284 SGIELCQHLHNTQLYGLTSNLLLHKNNTKYSKSLFEQNRKIPIWIDKEYTPPFLFWNFLR 343

Query: 263 NIDDADVVSFAKRLTTL------PMSEIDRMAK--LQGKEINEAKKIIATEITTMVHGRE 314
           NIDD  V S+   LT L      P S+I    +      +IN AK+ +A  +TT V+G E
Sbjct: 344 NIDDQQVDSYISMLTDLDVQSRNPSSDITSGGEDYHDDAQINRAKEKLADSVTTFVYGAE 403

Query: 315 EAEKAAT-------AAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTN 366
                 T             D     +  P I I+K+++ +  + ++ ++ K   A++  
Sbjct: 404 TVCTIHTLNRLLKEDEFSVIDRVDQLKVFPFIVINKNDIHKNDISIVHILRKFEVASTNK 463

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKL 393
           EA+  L    I +N  +I N K  + +
Sbjct: 464 EAKEKLAQRCIYLNRQLIDNAKYHLSM 490


>gi|159125094|gb|EDP50211.1| tyrosyl-tRNA synthetase, mitochondrial precursor (tyrosine--tRNA
           ligase) (tyrrs) [Aspergillus fumigatus A1163]
          Length = 631

 Score =  188 bits (477), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 116/352 (32%), Positives = 188/352 (53%), Gaps = 30/352 (8%)

Query: 5   KSDFLSILSERGFIHQISNPREL-DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           +  F+  L ERG IH +   R+L   + ++  V  Y+G D TA SLH GH+   M+L W 
Sbjct: 102 RKSFVEHLEERGLIHDVVGERDLLHRVFTEKRVGIYVGVDPTAPSLHVGHMLPFMVLAWG 161

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIE----KIKGIFSSFIKYGTG 119
              G     L+GG TS IGDP+ R + R  M S   + N+     ++K + +S  +YG  
Sbjct: 162 YVWGLPVTYLLGGATSRIGDPTGRLKGREAMDSSVRKANMASMHMQLKKLGASVEQYGRK 221

Query: 120 KT-------DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFL 172
                       ++NN TW  S   +++LR++G+   +  ML  E+V++R+ +   +SF 
Sbjct: 222 HGYHKEKIWRRALVNNNTWWNSTSLLEVLRDLGAHTRLGPMLGRETVKNRMTKGDGMSFA 281

Query: 173 EFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLG---------ERLKTP---- 219
           EF Y +LQA+D+  L +    ++Q+GGSDQ+GNI+ G+D           E+ + P    
Sbjct: 282 EFTYPLLQAWDWWVLFRK-GVQVQVGGSDQYGNILFGMDAVKSISKNTAIEQDRNPLEDD 340

Query: 220 --KLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT 277
             K    T+PLLT A+G K GK+   A+WL+K+MTS +  +Q++    D  V  + K  T
Sbjct: 341 LDKPIGFTTPLLTAANGEKFGKSAGNAVWLDKDMTSTFELYQFFVRTPDDVVERYLKLFT 400

Query: 278 TLPMSEIDRMAKLQGKEINE--AKKIIATEITTMVHGREEAEKAATAAMECF 327
            LP+ +I  + + Q K+ ++  A+  +A E   ++HG+EEA+  A    + F
Sbjct: 401 FLPLPKIAEIMEEQNKDPSKRIAQHTLAAEFLELIHGKEEADAVALQHRQLF 452


>gi|70994384|ref|XP_751993.1| tyrosyl-tRNA synthetase, mitochondrial precursor (tyrosine--tRNA
           ligase) (tyrrs) [Aspergillus fumigatus Af293]
 gi|66849627|gb|EAL89955.1| tyrosyl-tRNA synthetase, mitochondrial precursor (tyrosine--tRNA
           ligase) (tyrrs) [Aspergillus fumigatus Af293]
          Length = 632

 Score =  188 bits (477), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 116/352 (32%), Positives = 188/352 (53%), Gaps = 30/352 (8%)

Query: 5   KSDFLSILSERGFIHQISNPREL-DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           +  F+  L ERG IH +   R+L   + ++  V  Y+G D TA SLH GH+   M+L W 
Sbjct: 103 RKSFVEHLEERGLIHDVVGERDLLHRVFTEKRVGIYVGVDPTAPSLHVGHMLPFMVLAWG 162

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIE----KIKGIFSSFIKYGTG 119
              G     L+GG TS IGDP+ R + R  M S   + N+     ++K + +S  +YG  
Sbjct: 163 YVWGLPVTYLLGGATSRIGDPTGRLKGREAMDSSVRKANMASMHMQLKKLGASVEQYGRK 222

Query: 120 KT-------DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFL 172
                       ++NN TW  S   +++LR++G+   +  ML  E+V++R+ +   +SF 
Sbjct: 223 HGYHKEKIWRRALVNNNTWWNSTSLLEVLRDLGAHTRLGPMLGRETVKNRMTKGDGMSFA 282

Query: 173 EFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLG---------ERLKTP---- 219
           EF Y +LQA+D+  L +    ++Q+GGSDQ+GNI+ G+D           E+ + P    
Sbjct: 283 EFTYPLLQAWDWWVLFRK-GVQVQVGGSDQYGNILFGMDAVKSISKNTAIEQDRNPLEDD 341

Query: 220 --KLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT 277
             K    T+PLLT A+G K GK+   A+WL+K+MTS +  +Q++    D  V  + K  T
Sbjct: 342 LDKPIGFTTPLLTAANGEKFGKSAGNAVWLDKDMTSTFELYQFFVRTPDDVVERYLKLFT 401

Query: 278 TLPMSEIDRMAKLQGKEINE--AKKIIATEITTMVHGREEAEKAATAAMECF 327
            LP+ +I  + + Q K+ ++  A+  +A E   ++HG+EEA+  A    + F
Sbjct: 402 FLPLPKIAEIMEEQNKDPSKRIAQHTLAAEFLELIHGKEEADAVALQHRQLF 453


>gi|323302739|gb|EGA56545.1| Msy1p [Saccharomyces cerevisiae FostersB]
          Length = 372

 Score =  187 bits (476), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 111/301 (36%), Positives = 155/301 (51%), Gaps = 23/301 (7%)

Query: 7   DFLSILSERGFIHQISNPREL--DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           + L  L +RG + Q+S P       L     +  Y G D TA SLH G+L  LM+L    
Sbjct: 55  NILDELKQRGLVSQVSQPESFLRTKLNGNDKIKLYCGVDPTAQSLHLGNLVPLMVLLHFY 114

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG------- 117
             GH  ++++GG T  +GDPS R   R +M +   Q N+  I      F K G       
Sbjct: 115 VKGHDIVTVIGGATGKVGDPSGRKTERDVMENDIRQNNVTSISQQLQRFFKNGLEYYRNR 174

Query: 118 --------TGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSL 169
                   +GK      NN  W   IK +D L + G    V  ML+ +S+ SRL+ +  L
Sbjct: 175 CALTEDVPSGKYTPR--NNFNWWKDIKMLDFLADFGRHIRVQSMLARDSISSRLQTKNGL 232

Query: 170 SFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK----LFALT 225
            F EF Y +LQAYDF  L K  +  +Q+GG+DQWGNI  GIDL  R++  K     F +T
Sbjct: 233 GFNEFTYQVLQAYDFYHLYKEENVTIQVGGNDQWGNITAGIDLINRIQPIKNKGLPFGIT 292

Query: 226 SPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID 285
            PLLTTA+G K GK+   A++++  + + Y+ +Q++ N  DADV  F K  T L  SEI 
Sbjct: 293 VPLLTTATGEKFGKSAGNAVFIDPSINTAYDVYQFFYNTLDADVPKFLKIFTFLNSSEIK 352

Query: 286 R 286
           +
Sbjct: 353 K 353


>gi|146416377|ref|XP_001484158.1| hypothetical protein PGUG_03540 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 604

 Score =  187 bits (475), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 110/308 (35%), Positives = 158/308 (51%), Gaps = 33/308 (10%)

Query: 34  GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRM 93
           G +  Y G D +A SLH G+L   M++   +  G+  + L+GG T  +GDPS R + R  
Sbjct: 173 GQLKLYCGADPSAKSLHIGNLLPFMVMLHFRLRGYDVVGLIGGATGAVGDPSGRSKERAQ 232

Query: 94  MRSQEIQENIEKIKGIFSSFIKYGT--------------GKTDALMLNNETWLCSIKYID 139
           + S E  +N+ +I+     F+  G               GK+  ++ NN  W  SI  +D
Sbjct: 233 IESDERADNVARIELQIRQFLNNGVEYARSRNYPFPGDVGKS--VVRNNADWWKSIGMLD 290

Query: 140 LLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGG 199
            L + G    V  ML+ +S++SRL  +  L F EF Y +LQAYDF EL K     LQ+GG
Sbjct: 291 FLAKYGRHIRVTNMLARDSIQSRLSSQGGLGFNEFTYQVLQAYDFWELYKTEGVNLQIGG 350

Query: 200 SDQWGNIICGIDLGERL----------KTPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
           +DQWGNI  GIDL  RL          K    + +T PLLTT SG K GK+   A++++ 
Sbjct: 351 NDQWGNITAGIDLISRLHKLEPQTKERKDKNAYGITVPLLTTPSGEKFGKSAGNAVFIDP 410

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR-----MAKLQGKEINEAKKIIAT 304
            +TSPY  +QY+    D  V    K  T LP+  +D        K  G  I  A++++A 
Sbjct: 411 SITSPYQLYQYFIQTPDEIVGKLLKVFTLLPLHSVDEHILPDHEKDPGSRI--AQRVLAR 468

Query: 305 EITTMVHG 312
           E+  +VHG
Sbjct: 469 EVVDLVHG 476


>gi|148664997|gb|EDK97413.1| tyrosyl-tRNA synthetase 2 (mitochondrial), isoform CRA_b [Mus
           musculus]
          Length = 355

 Score =  187 bits (474), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 92/239 (38%), Positives = 140/239 (58%), Gaps = 8/239 (3%)

Query: 37  TAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRS 96
           T Y G+D T  SLH GHL  L+ LF  Q+ GH  I+L+GG T+++GDPS R + R  + +
Sbjct: 76  TVYCGFDPTGDSLHVGHLLTLLGLFHFQRAGHNVIALVGGSTALLGDPSGRTKGREALSA 135

Query: 97  QEIQEN-------IEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFS 149
           + ++ N       +E +    +     G       +L+N  W      +D L  +G  F 
Sbjct: 136 ECVRANAHALRRGLEALAANHARLFADGRPWGSFTVLDNAAWFQEQHLVDFLATVGGHFR 195

Query: 150 VNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICG 209
           +  +LS  SV+SRLK  + +S  EF Y +LQAYDF  L ++Y CR+Q+GGSDQ GNI+ G
Sbjct: 196 MGTLLSRLSVQSRLKSPEGMSLAEFFYQVLQAYDFYYLFQHYGCRVQLGGSDQLGNIMSG 255

Query: 210 IDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYW-RNIDDA 267
            +   +L    +F +T PL+T+ +G K+GK+   A+WLN+E TSP+  +Q++ R  DD+
Sbjct: 256 YEFIHKLTGEDVFGITVPLITSTTGAKLGKSAGNAVWLNREKTSPFELYQFFVRQQDDS 314


>gi|74210706|dbj|BAE23688.1| unnamed protein product [Mus musculus]
          Length = 349

 Score =  187 bits (474), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 92/239 (38%), Positives = 140/239 (58%), Gaps = 8/239 (3%)

Query: 37  TAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRS 96
           T Y G+D T  SLH GHL  L+ LF  Q+ GH  I+L+GG T+++GDPS R + R  + +
Sbjct: 70  TVYCGFDPTGDSLHVGHLLTLLGLFHFQRAGHNVIALVGGSTALLGDPSGRTKGREALSA 129

Query: 97  QEIQEN-------IEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFS 149
           + ++ N       +E +    +     G       +L+N  W      +D L  +G  F 
Sbjct: 130 ECVRANAHALRRGLEALAANHARLFADGRPWGSFTVLDNAAWFQEQHLVDFLATVGGHFR 189

Query: 150 VNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICG 209
           +  +LS  SV+SRLK  + +S  EF Y +LQAYDF  L ++Y CR+Q+GGSDQ GNI+ G
Sbjct: 190 MGTLLSRLSVQSRLKSPEGMSLAEFFYQVLQAYDFYYLFQHYGCRVQLGGSDQLGNIMSG 249

Query: 210 IDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYW-RNIDDA 267
            +   +L    +F +T PL+T+ +G K+GK+   A+WLN+E TSP+  +Q++ R  DD+
Sbjct: 250 YEFIHKLTGEDVFGITVPLITSTTGAKLGKSAGNAVWLNREKTSPFELYQFFVRQQDDS 308


>gi|156098520|ref|XP_001615292.1| tyrosine-tRNA ligase [Plasmodium vivax SaI-1]
 gi|148804166|gb|EDL45565.1| tyrosine-tRNA ligase, putative [Plasmodium vivax]
          Length = 511

 Score =  187 bits (474), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 129/438 (29%), Positives = 211/438 (48%), Gaps = 51/438 (11%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVV--------TAYIGYDLTASSLHAGHLTQ 56
           KS  L  L ER  IH +S+ + +D +                Y+G D+    LH G+L Q
Sbjct: 47  KSKALKKLFERKIIHYVSDVKAVDAMLHSNETEPKREKRKAVYLGIDVNCKYLHLGNLVQ 106

Query: 57  LMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKG-IFSSFIK 115
           L+ L  L+      + L+GG T++IGDPSF+   R+    +EI+EN E I+  I    ++
Sbjct: 107 LITLDILRNHKTDVVVLLGGSTTMIGDPSFQQADRKRPFHEEIRENEESIRSTIVRLLLR 166

Query: 116 YGT----------------GKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
            GT                 K    ++NN  W   +  +D L   G  FS++R+L  +  
Sbjct: 167 GGTPNMSTSPLGDFSIDEPNKGSLTIVNNREWYDQMDLVDFLTH-GQHFSLHRILKKDCF 225

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
           +++LK   +L+  + NY+ILQ+YDFV L K Y C +Q+GGSDQWGNI  GI+L + L   
Sbjct: 226 KAKLK-GNNLTLKDLNYLILQSYDFVHLYKRYRCCIQIGGSDQWGNIQSGIELCQHLCNE 284

Query: 220 KLFALTSPLLTTASGTKMGKTL-----SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAK 274
           +L+ LT+ LL   + TK  K+L        IW++++ T P+ FW + RN+DD  V S+  
Sbjct: 285 QLYGLTTNLLLHRNDTKYSKSLFEQNRKMPIWIDRDYTPPFLFWNFLRNVDDQQVDSYLC 344

Query: 275 RLTTLPMSEIDRM----------AKLQGK-EINEAKKIIATEITTMVHGREEAEKAATAA 323
            LT L +   D            A+  G   IN  K+ +A  +T  ++G E      T +
Sbjct: 345 MLTGLEVQGGDPPSEPTPSPSEGAEATGDAHINRKKEKLADAVTAFIYGEETVRTIHTLS 404

Query: 324 -------MECFDMSIHSQHMPTISISKDEV-SRGMGLLTLIVKAGFATSTNEARRHLKSN 375
                      D     +  P I I + ++ ++ + ++ ++ +   A +  EA+  L   
Sbjct: 405 RLLKEDRFAVVDRVDQLKVFPFILIRRSDLHNKQISIVHILRRFHVAATNKEAKEKLAQR 464

Query: 376 AIKINNSIISNEKLQIKL 393
            I +N  ++ + K ++ L
Sbjct: 465 CIYLNRRLVEDAKYRLSL 482


>gi|328479052|gb|EGF48517.1| tyrosyl-tRNA synthetase [Lactobacillus rhamnosus MTCC 5462]
          Length = 325

 Score =  186 bits (472), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 108/279 (38%), Positives = 155/279 (55%), Gaps = 21/279 (7%)

Query: 119 GKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMI 178
           G  D  +++N  WL  I  +D LR+ G  FSVN ML+ E V SRL  E  +S+ EF Y I
Sbjct: 22  GTDDFRIVDNYDWLSKISMLDFLRDYGKLFSVNNMLNKEVVASRL--ETGISYTEFTYQI 79

Query: 179 LQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTK 236
           LQ+ DF+ L K+ D +LQ+GG+DQWGNI  GIDL  RL+ P  + + LT+PL+  A GTK
Sbjct: 80  LQSVDFLHLFKHEDVQLQIGGADQWGNITAGIDLIHRLEGPDARAYGLTNPLMLKADGTK 139

Query: 237 MGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKE 294
            GK+  GA+WL+ E TSPY F+Q+W N DDADV  F K  T L   EI  +  A     E
Sbjct: 140 FGKSAGGAVWLDPEKTSPYEFYQFWFNQDDADVEKFLKFFTFLSRDEIAELVEATKTHPE 199

Query: 295 INEAKKIIATEITTMVHGREEAEKAATAAMECF-----DMSIHS-----QHMPTISISKD 344
              A++ +A  +T  VHG++  ++A + +   F     D+S        +  PT+   + 
Sbjct: 200 KRAAQRELARAVTKFVHGQKAVDQAESISAALFSGDVADLSADDIKQGFKQFPTVEAPQ- 258

Query: 345 EVSRGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNS 382
                  ++T +V       S  +AR  +++ AI IN +
Sbjct: 259 ---TAENIVTWLVDTTKIEPSRRQAREDIQNGAITINGT 294


>gi|21064341|gb|AAM29400.1| RE07958p [Drosophila melanogaster]
          Length = 339

 Score =  186 bits (472), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 100/266 (37%), Positives = 155/266 (58%), Gaps = 17/266 (6%)

Query: 12  LSERGFIHQI----SNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           L++RGF H I    + PR +  L ++G  + Y G+D TA SLH G+L  +M L   Q+ G
Sbjct: 31  LTDRGFFHGIFPDTAAPR-MKQLFTRGQQSIYAGFDPTADSLHVGNLLVIMGLIHCQRAG 89

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI----EKIKGIFSSF-------IKY 116
           H+PI+L+GG T +IGDPS R   R  +    I+ N+    ++++ +F +         K 
Sbjct: 90  HRPIALVGGATGLIGDPSGRKTERNQLGETVIETNLKAIEQQLRRVFENHENCLWDSKKQ 149

Query: 117 GTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNY 176
                  +++NN  W   ++ ID +  +G  F +  MLS  SV+SRL+ E  +SF EF Y
Sbjct: 150 KLPLAPLIIVNNADWYADLQLIDFVANMGRHFRMGSMLSRSSVQSRLESEDGMSFTEFTY 209

Query: 177 MILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK-LFALTSPLLTTASGT 235
            I QAYD++ L + ++C  QMGGSDQ GN++ G +L  R++  + +F LT PL+TT  G 
Sbjct: 210 QIFQAYDWLHLLRRHNCCFQMGGSDQTGNLMTGHELISRVERKREVFGLTLPLVTTEEGD 269

Query: 236 KMGKTLSGAIWLNKEMTSPYNFWQYW 261
           K GK+   A+WL+   TSP+  +Q++
Sbjct: 270 KFGKSAGNAVWLDGNKTSPFALYQFF 295


>gi|238491532|ref|XP_002377003.1| tyrosyl-tRNA synthetase, mitochondrial precursor (tyrosine--tRNA
           [Aspergillus flavus NRRL3357]
 gi|220697416|gb|EED53757.1| tyrosyl-tRNA synthetase, mitochondrial precursor (tyrosine--tRNA
           [Aspergillus flavus NRRL3357]
          Length = 617

 Score =  185 bits (470), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 112/352 (31%), Positives = 188/352 (53%), Gaps = 30/352 (8%)

Query: 5   KSDFLSILSERGFIHQISNPREL-DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           + +F   L +RG +H +   REL   + ++     Y G D TA SLH GH+   M+L W 
Sbjct: 95  RKNFAQHLEDRGLLHDVVGERELLHKVFTEKRAGMYAGVDPTAPSLHVGHMLPFMVLAWG 154

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIE----KIKGIFSSFIKYGTG 119
              G     ++GG TS +GDP+ R + R  + S   + N+     ++K + +S  +YG  
Sbjct: 155 YVWGLPVTWVLGGATSRVGDPTGRLKGREQVHSSVRKANMASMHMQLKKLGASIEQYGKR 214

Query: 120 KT-------DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFL 172
                       ++NN TW   + +I++LR++G+   +  ML  E+V++RL +   +SF 
Sbjct: 215 HGYEKKWAWKRSLVNNNTWWNKVPFIEVLRDLGAHMRLGPMLGRETVKNRLSKGDGMSFS 274

Query: 173 EFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGID---------LGERLKTP---- 219
           EF+Y +LQA+D+  L K    ++Q+GG+DQ+GNI+ G+D           E+ + P    
Sbjct: 275 EFSYPLLQAWDWWVLFKK-GVQVQVGGTDQYGNILFGMDSVKAISKNTAMEQERDPLEND 333

Query: 220 --KLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT 277
                 LT+PLLT  +G K GK+   AIWL+K+MTS +  +Q++    D  V  + K  T
Sbjct: 334 IDNPIGLTTPLLTAPNGEKFGKSAGNAIWLDKDMTSTFELYQFFVRTPDDVVERYLKMFT 393

Query: 278 TLPMSEIDRMAKLQGKEINE--AKKIIATEITTMVHGREEAEKAATAAMECF 327
            LP+ EI ++ + Q K+ ++  A+  +A E   ++HG++EA+  A    + F
Sbjct: 394 FLPLPEIAKLMEEQNKDPSKRVAQHALAAEFVELIHGKQEADAVALQHRQLF 445


>gi|317146027|ref|XP_001821240.2| tyrosyl-tRNA synthetase [Aspergillus oryzae RIB40]
          Length = 617

 Score =  185 bits (470), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 112/352 (31%), Positives = 188/352 (53%), Gaps = 30/352 (8%)

Query: 5   KSDFLSILSERGFIHQISNPREL-DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           + +F   L +RG +H +   REL   + ++     Y G D TA SLH GH+   M+L W 
Sbjct: 95  RKNFAQHLEDRGLLHDVVGERELLHKVFTEKRAGMYAGVDPTAPSLHVGHMLPFMVLAWG 154

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIE----KIKGIFSSFIKYGTG 119
              G     ++GG TS +GDP+ R + R  + S   + N+     ++K + +S  +YG  
Sbjct: 155 YVWGLPVTWVLGGATSRVGDPTGRLKGREQVHSSVRKANMASMHMQLKKLGASIEQYGKR 214

Query: 120 KT-------DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFL 172
                       ++NN TW   + +I++LR++G+   +  ML  E+V++RL +   +SF 
Sbjct: 215 HGYEKKWAWKRSLVNNNTWWNKVPFIEVLRDLGAHMRLGPMLGRETVKNRLSKGDGMSFS 274

Query: 173 EFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGID---------LGERLKTP---- 219
           EF+Y +LQA+D+  L K    ++Q+GG+DQ+GNI+ G+D           E+ + P    
Sbjct: 275 EFSYPLLQAWDWWVLFKK-GVQVQVGGTDQYGNILFGMDSVKAISKNTAMEQERDPLEND 333

Query: 220 --KLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT 277
                 LT+PLLT  +G K GK+   AIWL+K+MTS +  +Q++    D  V  + K  T
Sbjct: 334 IDNPIGLTTPLLTAPNGEKFGKSAGNAIWLDKDMTSTFELYQFFVRTPDDVVERYLKMFT 393

Query: 278 TLPMSEIDRMAKLQGKEINE--AKKIIATEITTMVHGREEAEKAATAAMECF 327
            LP+ EI ++ + Q K+ ++  A+  +A E   ++HG++EA+  A    + F
Sbjct: 394 FLPLPEIAKLMEEQNKDPSKRVAQHALAAEFVELIHGKQEADAVALQHRQLF 445


>gi|218678007|ref|ZP_03525904.1| tyrosyl-tRNA synthetase [Rhizobium etli CIAT 894]
          Length = 180

 Score =  185 bits (470), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 85/177 (48%), Positives = 121/177 (68%)

Query: 239 KTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEA 298
           K+ SGA+WLN ++   Y+FWQYWRN +DADV  F K  TTLPM EI R++ L G E+NE 
Sbjct: 1   KSASGAVWLNADLLPVYDFWQYWRNTEDADVPRFLKLFTTLPMDEIARLSALGGSELNEV 60

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVK 358
           KKI+ATE+T ++HGR  AE AA  A + F+    S+++P++ I   E+  G+GLL+L+V+
Sbjct: 61  KKILATEVTAILHGRPAAELAAETARKTFEEGGLSENLPSVDIPATELDGGIGLLSLMVR 120

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           AG A S  EARRH++  A++IN+  +S+E+  I   +  + G IKLS GKK HI+  
Sbjct: 121 AGLAGSNGEARRHIQGGAVRINDEAVSDERRLIGSNEITADGVIKLSLGKKKHILIR 177


>gi|297170578|gb|ADI21605.1| tyrosyl-tRNA synthetase [uncultured Oceanospirillales bacterium
           HF0130_06B06]
          Length = 233

 Score =  185 bits (470), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 89/217 (41%), Positives = 137/217 (63%), Gaps = 1/217 (0%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D +S L  R  I Q++   +L    ++G    Y G+D TA SLH G +  L++L   Q  
Sbjct: 7   DIISELENRDLIAQLAGEDKLKEHIAEGKRAVYCGFDPTAESLHIGSVVPLLVLRRFQLA 66

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKPI+L+GG T +IGDPSF+   R++  S  ++E +E++K   S F+ +  G   A+++
Sbjct: 67  GHKPIALVGGATGLIGDPSFKSAERQLNPSNVVEEWVERLKPQLSQFLDFDCGTNSAVLV 126

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDFV 185
           NN  W  +   +  LR++G  FSVN M+  +SV+ R++R+ + +S+ EF+YM+LQ+ DF 
Sbjct: 127 NNLEWTQNRDLLTFLRDVGKHFSVNSMVQKDSVKQRIERDGEGISYTEFSYMLLQSLDFA 186

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLF 222
           EL K +DC +Q+GGSDQWGNI  GIDL  R+   ++F
Sbjct: 187 ELHKRFDCSIQVGGSDQWGNITGGIDLTXRIYQKQVF 223


>gi|19075933|ref|NP_588433.1| mitochondrial tyrosine-tRNA ligase (predicted) [Schizosaccharomyces
           pombe 972h-]
 gi|74626920|sp|O74890|SYYM_SCHPO RecName: Full=Tyrosyl-tRNA synthetase, mitochondrial; AltName:
           Full=Tyrosine--tRNA ligase; Short=TyrRS; Flags:
           Precursor
 gi|3687461|emb|CAA21185.1| mitochondrial tyrosine-tRNA ligase (predicted) [Schizosaccharomyces
           pombe]
          Length = 445

 Score =  185 bits (469), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 111/328 (33%), Positives = 174/328 (53%), Gaps = 22/328 (6%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L  L  R  IH   N   L   C+  V + Y+G D TA+SLH G+L  LM L      G 
Sbjct: 8   LKQLQARSLIH---NTTLLQPSCN--VNSVYLGADPTAASLHVGNLVALMPLVHFFLNGF 62

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMM----RSQEIQENIEKIKGIFSSFIKYG------- 117
              +++G  T+ +GDPS R  SR+ M    R+        ++K + SS + Y        
Sbjct: 63  PVFTVIGDATAQLGDPSGRSTSRKQMAETTRTANSNSIHNQLKDLSSSILSYAQDCNYPF 122

Query: 118 ---TGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEF 174
                 +   ++ N +W  ++K +  L  +G    V++ML+ +SV +RL+    LSF E 
Sbjct: 123 SQMPSSSQWSIVRNSSWYENLKLLKFLSSVGPHVRVSQMLARDSVTTRLQSPSGLSFAEL 182

Query: 175 NYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL-KTPKLFALTSPLLTTAS 233
            Y +LQAYD+  L +N+   LQ+GGSDQWGNI  G DL  R      ++ALT+PLLT++S
Sbjct: 183 TYQLLQAYDYSYLYENHSVNLQIGGSDQWGNITAGTDLVRRTHPNANVYALTTPLLTSSS 242

Query: 234 GTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK 293
           G K+GK+   AIWL+ ++T  Y+ +QY+ +  D         LT LP+ +++++     K
Sbjct: 243 GQKLGKSAGNAIWLDPKLTDSYSLYQYFISAPDDLACKCLDMLTLLPLEQLEQIKAEHEK 302

Query: 294 EINE--AKKIIATEITTMVHGREEAEKA 319
           + ++    K +A+ +  MVHG++  E A
Sbjct: 303 DPSQRIVHKYLASNVVRMVHGKKALELA 330


>gi|61680508|pdb|1Y42|X Chain X, Crystal Structure Of A C-Terminally Truncated Cyt-18
           Protein
 gi|164519509|pdb|2RKJ|A Chain A, Cocrystal Structure Of A Tyrosyl-Trna Synthetase Splicing
           Factor With A Group I Intron Rna
 gi|164519510|pdb|2RKJ|B Chain B, Cocrystal Structure Of A Tyrosyl-Trna Synthetase Splicing
           Factor With A Group I Intron Rna
 gi|164519511|pdb|2RKJ|E Chain E, Cocrystal Structure Of A Tyrosyl-Trna Synthetase Splicing
           Factor With A Group I Intron Rna
 gi|164519512|pdb|2RKJ|F Chain F, Cocrystal Structure Of A Tyrosyl-Trna Synthetase Splicing
           Factor With A Group I Intron Rna
 gi|164519513|pdb|2RKJ|I Chain I, Cocrystal Structure Of A Tyrosyl-Trna Synthetase Splicing
           Factor With A Group I Intron Rna
 gi|164519514|pdb|2RKJ|J Chain J, Cocrystal Structure Of A Tyrosyl-Trna Synthetase Splicing
           Factor With A Group I Intron Rna
 gi|164519515|pdb|2RKJ|M Chain M, Cocrystal Structure Of A Tyrosyl-Trna Synthetase Splicing
           Factor With A Group I Intron Rna
 gi|164519516|pdb|2RKJ|N Chain N, Cocrystal Structure Of A Tyrosyl-Trna Synthetase Splicing
           Factor With A Group I Intron Rna
          Length = 392

 Score =  185 bits (469), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 115/346 (33%), Positives = 181/346 (52%), Gaps = 31/346 (8%)

Query: 5   KSDFLSILSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           K +   +  ERG++   +  +E +  L     + AY+G D TA SLH GHL  LM LFW+
Sbjct: 33  KQNTWDLFEERGYVKDTAGTKEHIAELMRTRRIGAYVGIDPTAPSLHVGHLLPLMPLFWM 92

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
              G+K  +L+GG T+ IGDP+ R +SR  + S +   N+ KI        +    +  A
Sbjct: 93  YLEGYKAFTLIGGSTAKIGDPTGRLKSRDHLSSSDATMNMTKIHYQLKKLWENVDTQMRA 152

Query: 124 L-----------MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFL 172
                       ++NN  W      +++LR +G    +  MLS ++V++++ +   +SF 
Sbjct: 153 RGYEADWARKRGIVNNNHWWNKQPMLEVLRRVGHALRIGPMLSRDTVKNKMTQGDGVSFA 212

Query: 173 EFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGI-----------DLGER-LKTPK 220
           EF Y I+Q +D+ EL      ++Q+GGSDQ+GNII G+           D  ER   TPK
Sbjct: 213 EFTYPIMQGWDWFELFYQQGVQMQIGGSDQYGNIISGLEVVKAARESEPDPQERKYVTPK 272

Query: 221 L-----FALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKR 275
                    T PLLT +SG K GK+   AIWL+   TS ++F+ Y+    D +V +  K 
Sbjct: 273 TALDECVGFTVPLLTDSSGAKFGKSAGNAIWLDPYQTSVFDFYGYFVRRSDQEVENLLKL 332

Query: 276 LTTLPMSEIDRMAKLQGKEINE--AKKIIATEITTMVHGREEAEKA 319
            T +P+SEI +  +   K+ ++  A+  +A E+ T+VHG++EA  A
Sbjct: 333 FTFMPISEITKTMEEHIKDPSKRVAQHTLAREVVTLVHGKQEASAA 378


>gi|320591092|gb|EFX03531.1| tyrosyl-tRNA synthetase [Grosmannia clavigera kw1407]
          Length = 650

 Score =  184 bits (468), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 111/349 (31%), Positives = 188/349 (53%), Gaps = 34/349 (9%)

Query: 11  ILSERGFIHQISNPRELDI--LCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           I  ERG++  ++  RE DI  L +Q  + AY+G D TA S+H GHL  LM LFW+   G+
Sbjct: 75  IFEERGYVKDVAGNRE-DIRKLLTQKRIGAYVGIDPTAPSMHVGHLLPLMPLFWMYMHGY 133

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIK--------GIFSSFIKYGTGK 120
           + ++L+GG T  IGDP+ R +SR  +++  +  N+ K+          + +   +YG  K
Sbjct: 134 RAVTLLGGATGKIGDPTDRLQSRAELKNATVAMNMVKMHYQLKKLWVNVEAQARRYGYEK 193

Query: 121 TDAL---MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYM 177
           T A    +L N  W   +  +++L+ +G+   +  MLS ++VR +L     +SF EF+Y 
Sbjct: 194 TWAWRRGVLQNGHWWNKLPMLEILQRLGAGLRIGPMLSRDTVRRKLTEGDGMSFAEFSYP 253

Query: 178 ILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT----PKL----------FA 223
           ++QA+D+  +  +   ++Q+GGSDQ+GNI+ G D  + ++     P L            
Sbjct: 254 LMQAWDWWHMYISQGIQMQIGGSDQYGNIVTGADAFKIIRASEPNPALKLSSGLLHDPVG 313

Query: 224 LTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSE 283
            T PLLT +SG K GK+   AIWL++  T  ++ + Y+    DADV +  +  T +P+  
Sbjct: 314 FTVPLLTDSSGAKFGKSAGNAIWLDRFQTPTFDLYGYFVRRPDADVEALLRLFTFIPLDR 373

Query: 284 IDRMAKLQGKEINEAKKI----IATEITTMVHGREEAEKAATAAMECFD 328
           I   A ++   ++ A+++    +A E+  +VHG E A +A       +D
Sbjct: 374 I--TALMEDHTVDPARRLAQHTLAFEVVALVHGLELATEARDRHRAMYD 420


>gi|238063978|ref|ZP_04608687.1| tyrosyl-tRNA synthetase [Micromonospora sp. ATCC 39149]
 gi|237885789|gb|EEP74617.1| tyrosyl-tRNA synthetase [Micromonospora sp. ATCC 39149]
          Length = 450

 Score =  183 bits (465), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 107/309 (34%), Positives = 160/309 (51%), Gaps = 16/309 (5%)

Query: 113 FIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFL 172
            ++ G  +   L+         +  ++ LR++G  F VN+ML+ E V++RL  E  +SF 
Sbjct: 139 LVQRGGERGGGLVQQPGPGPGRLSVVEFLRDVGKHFPVNKMLAREVVKARL--ETGISFT 196

Query: 173 EFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTA 232
           EF+Y +LQA DF EL + + C+LQ GGSDQWGNI  G+D   R     + A  +PL+T A
Sbjct: 197 EFSYQLLQANDFYELHRRHGCQLQFGGSDQWGNITAGVDYVRRRGAGPVQAFVTPLVTKA 256

Query: 233 SGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--L 290
            GTK GKT  GA+WL+ E+TSPY F+Q+W N DD DVV + +  +     EI+R+ K   
Sbjct: 257 DGTKFGKTEGGAVWLDPELTSPYAFYQFWLNADDRDVVRYLRYFSFRSRDEIERLEKETA 316

Query: 291 QGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI---------SI 341
           +      A++ +A E+TT+VHG  E  +A  A+   F         P            +
Sbjct: 317 ERPAARLAQRALAEELTTLVHGEREMAQAVAASQALFGRGSLDDLTPETLRAALTEAGLV 376

Query: 342 SKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
             DE+    GLL    ++G   S  EARR +      +NN+ I+    +   +D      
Sbjct: 377 HLDELPDVAGLLR---ESGLVPSAKEARRVIAEGGAYVNNNRITEVDARPTPEDLLHGRY 433

Query: 402 IKLSFGKKN 410
           + L  GKK+
Sbjct: 434 LVLRRGKKS 442


>gi|238583408|ref|XP_002390231.1| hypothetical protein MPER_10524 [Moniliophthora perniciosa FA553]
 gi|215453410|gb|EEB91161.1| hypothetical protein MPER_10524 [Moniliophthora perniciosa FA553]
          Length = 480

 Score =  183 bits (465), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 122/390 (31%), Positives = 191/390 (48%), Gaps = 57/390 (14%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L+ERGFI Q + P EL    +      Y G D T  SLH GHL   M L   Q  GH  I
Sbjct: 97  LTERGFIQQATRPDELKNALASSPQIVYAGIDPTDRSLHIGHLLPFMCLLHFQLQGHGII 156

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+GG T ++GDPS R   R     + ++ N+                    L L+N   
Sbjct: 157 PLIGGATGLVGDPSGRKTEREPTDVKLVESNV--------------------LALSN--- 193

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFE-------SVRSRLKREQSLSFLEFNYMI---LQA 181
             SIK+    R    +       SFE        V+S L   +  + LEF  ++    +A
Sbjct: 194 --SIKH--FFRHASQYAQSRVPFSFEKEPTLGLEVKSNLVWHKDFNMLEFLRIVGIHARA 249

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKL-----FALTSPLLTTASGTK 236
           YDF  L +++ C +Q+GGSDQWGNI+ G++L  RLK  +      F +T+PLLTTASG K
Sbjct: 250 YDFYYLHEHHQCTIQIGGSDQWGNILAGLELIGRLKHSETDGGSAFGITTPLLTTASGEK 309

Query: 237 MGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKE 294
            GK+   A+WL+ ++TS ++F+QY+  ++DADV  + K  T LP+SEI  +  +     E
Sbjct: 310 FGKSAGNAVWLDPQLTSVFDFYQYFLKVEDADVEKYLKLFTLLPLSEIREIVFSHKMAPE 369

Query: 295 INEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLT 354
              A++ +A E+T       + +  A + ++ F+        P +     E      ++ 
Sbjct: 370 KRIAQRRLADEVT-------DQQLDAQSLIQAFESD------PRLKWCSKEELTSTSVMK 416

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSII 384
           L  + G  +ST+ AR+ +++  + +N+  +
Sbjct: 417 LASRYGLVSSTSAARQLIQARGLYVNDKTV 446


>gi|150865466|ref|XP_001384692.2| tyrosyl-tRNA synthetase [Scheffersomyces stipitis CBS 6054]
 gi|149386722|gb|ABN66663.2| tyrosyl-tRNA synthetase [Scheffersomyces stipitis CBS 6054]
          Length = 552

 Score =  183 bits (465), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 116/344 (33%), Positives = 179/344 (52%), Gaps = 25/344 (7%)

Query: 2   PAFKSDFLSILSERGFIHQISNPRELDILCSQGV--VTAYIGYDLTASSLHAGHLTQLML 59
           P      +  L  R  +  I++    D+   +       Y G D TA SLH G+L  LM+
Sbjct: 91  PDLDMPLVGHLQSRYLVESITDDALFDLTSPESTKKFKLYCGADPTAESLHLGNLLPLMV 150

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT- 118
           L      GH  + L+GG T  +GDPS R   R  +  +E ++N+ KI+    +F++ G  
Sbjct: 151 LLHFNLRGHDVVGLVGGATGAVGDPSGRTTERSQIEDKEREDNVSKIQKQLVTFLENGVA 210

Query: 119 ----------GKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQS 168
                     G+   L  NN +W  SI  ++ L + G    V+ ML+ +S++SRLK +  
Sbjct: 211 YAKSRNYPIAGEGRILTANNASWWSSIGMLEFLAKYGRHIRVSSMLARDSIQSRLKDQHG 270

Query: 169 LSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK--------TPK 220
           L F EF Y ILQAYDF  + +     +Q+GG+DQWGNI  GIDL  RL+         P+
Sbjct: 271 LGFNEFTYQILQAYDFWHMFREDGVNMQIGGNDQWGNITAGIDLISRLQRHFGKEGVEPQ 330

Query: 221 -LFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTL 279
             + +T PLLT+ +G K GK+   A++++++ T+PY  +QY+ N  D  V    K LT L
Sbjct: 331 SAYGMTVPLLTSPTGEKFGKSAGNAVFIDEKYTTPYQMYQYFINSPDDMVAKLLKTLTLL 390

Query: 280 PMSEIDR--MAKLQGKE-INEAKKIIATEITTMVHGREEAEKAA 320
           P+S ID   + K +    +  A++I+A E+  ++HG    E+ A
Sbjct: 391 PLSIIDGYILPKHESDPGLRIAQRILAREVVDLIHGEGVGEEMA 434


>gi|313678879|ref|YP_004056619.1| tyrosine--tRNA ligase [Mycoplasma bovis PG45]
 gi|312950125|gb|ADR24720.1| tyrosine--tRNA ligase [Mycoplasma bovis PG45]
          Length = 411

 Score =  183 bits (465), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 114/402 (28%), Positives = 212/402 (52%), Gaps = 37/402 (9%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + L+ + ER  +  ISN  +  I  +      Y+G+D TA SLH G+   + +L   +K 
Sbjct: 2   NILNDIEERLILKDISNKDKF-IGLNPATTGVYVGFDPTAESLHLGNYILISVLLRFKKY 60

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           G +  +++GG T +IGDPSF+D  R ++ ++ +  N  +IK    SF           ++
Sbjct: 61  GFRTYAVIGGATGMIGDPSFKDSERVLLDNESVINNKLRIKAQLESF--------GLEVI 112

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           +N  +   +  +D LR +G   +V+ M++ ESV+ R+++   LSF EF Y +LQ  DF++
Sbjct: 113 DNYDFYKDMNVLDFLRNVGKLVNVSYMMAKESVQKRIQK--GLSFTEFTYQLLQGADFLK 170

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK--LFALTSPLLTTASGTKMGK-TLSG 243
             +    ++Q+GGSDQWGNI+ GID+  ++   K     +T  LL+  +G K+GK T  G
Sbjct: 171 TYQESGIKIQLGGSDQWGNIVTGIDMISKVVGDKHEAVGVTVNLLSDENGKKIGKSTGGG 230

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI----DRMAKLQGKEINEAK 299
           A+W++K M SP+  +QY  + +D+ +       +   ++EI    D+      K+I  A+
Sbjct: 231 ALWIDKTMCSPFKMYQYLLSQNDSRIKELLYWFSFKDINEINDVLDKHFANPSKQI--AQ 288

Query: 300 KIIATEITTMVHGREEAEKAA------------TAAMECFDMSIHSQHMPTISISKDEVS 347
           K +A E+   + G +E ++A             T+++   D+ I   ++P   I + ++ 
Sbjct: 289 KFLANEVIENIFGFDELKQAQNITKILFDKLFDTSSLSVTDLEIIEHYLPVCPIKQGDL- 347

Query: 348 RGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKL 389
               ++  ++   F  S  EAR  +++ A+K++N  ++N+ +
Sbjct: 348 ----VIKTLIDNKFIASNREAREFIQAGALKLDNCEVNNDSV 385


>gi|323245784|gb|EGA29775.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2009159199]
          Length = 205

 Score =  183 bits (464), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 87/202 (43%), Positives = 128/202 (63%), Gaps = 1/202 (0%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 4   SNLIKQLQERGLVAQVTDEDALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +QE + KI+   + F+ +  G+  A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVAKIRKQVAPFLDFDCGENSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDF 184
            NN  W  S+  +  LR+IG  FSVN+M++ E+V+ RL R +Q +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGSMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDQGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNI 206
             L K +   LQ+GGSDQWGNI
Sbjct: 184 ACLNKLHGVALQIGGSDQWGNI 205


>gi|47459382|ref|YP_016244.1| tyrosyl-tRNA synthetase [Mycoplasma mobile 163K]
 gi|81614119|sp|Q6KH97|SYY_MYCMO RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|47458712|gb|AAT28033.1| tyrosyl-tRNA synthetase [Mycoplasma mobile 163K]
          Length = 415

 Score =  183 bits (464), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 120/396 (30%), Positives = 205/396 (51%), Gaps = 31/396 (7%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           FL  L E+  I  ISN  +++    +  +  Y+G+D +A S+H G+   + +L   +K  
Sbjct: 4   FLKELQEKNLIQDISNIEKIE-NSLKNKMGIYVGFDPSAKSIHLGNFVVINVLLIAKKHR 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
              ++L+GG T  IGDPS +   R ++    +++N E IK     F+       DA ++N
Sbjct: 63  IPTVALIGGATGGIGDPSGKKSERILIDEDTLKKNTEAIKKQIKHFL------PDAKIVN 116

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  +  +  +ID LR++G F  V+ MLS E V++RL  E  +SF EF Y ++QA DF  L
Sbjct: 117 NSDFYKNQSFIDFLRDVGKFIQVSYMLSKEIVKNRL--ESGISFTEFAYSLIQANDFHYL 174

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFA--LTSPLLTTASGTKMGKTLSGAI 245
            KN++  +Q GGSDQWGNI  G++L  +      F+   T  LL  + GTK GK+  GAI
Sbjct: 175 FKNHNVGIQFGGSDQWGNITTGLELIRKRNGENSFSGGFTIKLLLKSDGTKFGKSEQGAI 234

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKKIIA 303
           +L+  +TSPY  +Q+  N +D+D+++    ++ L + EI  +     +  E    +K++A
Sbjct: 235 YLDPSLTSPYTMYQFLLNQNDSDLLNLFNFISDLGIKEILEIITKHSENPEKRYGQKMLA 294

Query: 304 TEITTMVHGREEAEKAATAAMECF------DMS-------IHSQHMPTISISKDEVSRGM 350
             I   +HG+    +    +   F      D+S       I+S  +  ++ S DE     
Sbjct: 295 NNIVNRIHGKNALNEVENISNILFKNGKINDLSKSEVSIIINSFEVNHVNFSNDE----- 349

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISN 386
            ++ ++ +A    S NE R+ ++   + +   II++
Sbjct: 350 KIIDILDRAKIFKSKNEIRKLIEQKGLVVGAEIITD 385


>gi|310789952|gb|EFQ25485.1| tRNA synthetase class I [Glomerella graminicola M1.001]
          Length = 636

 Score =  182 bits (463), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 109/341 (31%), Positives = 185/341 (54%), Gaps = 34/341 (9%)

Query: 7   DFLSILSERGFIHQISN--PRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           +   I  ERG++  ++   P+  ++L ++  + AY+G D TA+SLH GHL   M LFW+ 
Sbjct: 65  NIWDIFEERGYVKDVAGRTPQIKELLRTK-RIGAYVGVDPTAASLHVGHLLPFMPLFWMH 123

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKI----KGIFSSF----IKY 116
             G+  +SL+GG T  IGDP+ R ++R +M + E+  NI KI    K I+S+      KY
Sbjct: 124 LHGYTAVSLVGGATGRIGDPTDRLKTREVMANSEVSMNITKIHYQLKKIWSNVEALGRKY 183

Query: 117 G-----TGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSF 171
           G      GK    ++NN  W   +   D+++ +G +  +  MLS ++V++++++   +S 
Sbjct: 184 GKEPEWAGKKH--LVNNNMWWQGLPLYDVMKRLGRYMRIGPMLSRDTVKNKMEKGDGMSL 241

Query: 172 LEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT----PKL------ 221
            EF Y ++Q +DF  L      ++Q+GGSDQ+GNI+ GI+  + +++    P +      
Sbjct: 242 AEFIYPLMQGWDFWHLYSKLGVQMQIGGSDQFGNIVTGIEAVKTIRSSEENPNMRMPDTW 301

Query: 222 ----FALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT 277
                  T PLLT  +GTK GK+   A+WL+  MTS ++ + Y+    D +V    K  T
Sbjct: 302 KDDPIGFTVPLLTDNAGTKFGKSAGNAVWLDPFMTSAFDLYGYFARRPDNEVEKLLKLFT 361

Query: 278 TLPMSEIDRM--AKLQGKEINEAKKIIATEITTMVHGREEA 316
            LP + I+++     Q      A+  +A E+ ++VHG + A
Sbjct: 362 FLPTTSIEKLMIEHAQDPPKRVAQHTLAFEVLSLVHGADVA 402


>gi|54020016|ref|YP_115580.1| tyrosyl tRNA synthetase [Mycoplasma hyopneumoniae 232]
 gi|71893418|ref|YP_278864.1| tyrosyl tRNA synthetase [Mycoplasma hyopneumoniae J]
 gi|81378792|sp|Q601Y5|SYY_MYCH2 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|97201635|sp|Q4AAX3|SYY_MYCHJ RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|53987189|gb|AAV27390.1| tyrosyl tRNA synthetase [Mycoplasma hyopneumoniae 232]
 gi|71851545|gb|AAZ44153.1| tyrosyl tRNA synthetase [Mycoplasma hyopneumoniae J]
          Length = 414

 Score =  182 bits (462), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 128/402 (31%), Positives = 207/402 (51%), Gaps = 43/402 (10%)

Query: 5   KSDFLSILSERGFIHQISNPREL-DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           K +FL+ L  R  +  IS+P +  ++   QG+   YIG+D TA+SLH G+   + LL  L
Sbjct: 6   KQEFLTELKTRNILKDISSPEKFFNLKPDQGI---YIGFDPTATSLHLGNYISISLLKRL 62

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           QK G K ++++GG T +IGDPSF  + R+++  + +  N EKIK    SF          
Sbjct: 63  QKIGIKVLAVIGGATGMIGDPSFSSKERKLLDFKTLNANKEKIKKQLESF--------GL 114

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            + +N     ++  +D LR++G   +++ +L+ ESV SR+  E  LSF EF+Y ++Q +D
Sbjct: 115 PVFDNFEIYKNMNILDFLRDVGKNINISYLLAKESVASRI--EVGLSFTEFSYQLIQGWD 172

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGER---LKTPKLFALTSPLLTTASGTKMGKT 240
           F  LA+NY    Q GGSDQWGN++ G+D  ++   ++  + F  T+ LLT  +G K GK+
Sbjct: 173 FKFLAENYQIIGQAGGSDQWGNMVTGLDFIKKSNLVQKDEAFVFTTNLLTDENGQKFGKS 232

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           L   IWL+ EM SP++ +Q+  N +D         L+ L +  I+ +     K  N+ K+
Sbjct: 233 LGKPIWLDPEMYSPFHLYQFLLNQNDEQAEKIMLWLSFLDLKVINELI---FKHKNDKKQ 289

Query: 301 II-----ATEITTMVHGREE---AEKAATAAMECFDMSIHS--------QHMPTISISKD 344
            I     A E+   +HG +    A+K      E  D +  +        + +P   +S  
Sbjct: 290 RILQYNLAQEVVFNIHGDKGLKIAKKITKILFEKLDYTEITFKDKLELKKIIPYFKVSFF 349

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISN 386
             ++       I+  G   S  E    +   A++IN S ISN
Sbjct: 350 NANQ-------IIDLGIFKSKRELNEFISHKALEINGSKISN 384


>gi|55821068|ref|YP_139510.1| tyrosyl-tRNA synthetase E [Streptococcus thermophilus LMG 18311]
 gi|55822994|ref|YP_141435.1| tyrosyl-tRNA synthetase E [Streptococcus thermophilus CNRZ1066]
 gi|81559384|sp|Q5LZR6|SYY2_STRT1 RecName: Full=Tyrosyl-tRNA synthetase 2; AltName:
           Full=Tyrosine--tRNA ligase 2; Short=TyrRS 2
 gi|81560583|sp|Q5M4D1|SYY2_STRT2 RecName: Full=Tyrosyl-tRNA synthetase 2; AltName:
           Full=Tyrosine--tRNA ligase 2; Short=TyrRS 2
 gi|55737053|gb|AAV60695.1| tyrosyl-tRNA synthetase E [Streptococcus thermophilus LMG 18311]
 gi|55738979|gb|AAV62620.1| tyrosyl-tRNA synthetase E [Streptococcus thermophilus CNRZ1066]
          Length = 302

 Score =  182 bits (461), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 109/302 (36%), Positives = 159/302 (52%), Gaps = 13/302 (4%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG + Q S+   ++ L + G +T YIG D TA SLH GH +  ++   L K GH+PI
Sbjct: 7   LQWRGLVKQYSSDSLIEKL-NNGKLTFYIGTDPTADSLHLGHYSSFLIAKRLAKYGHQPI 65

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQE-IQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
            L+GG T+++GDP  R  S R +  QE I +N EK+K        Y        ++NN  
Sbjct: 66  ILIGGATALVGDP--RGTSERDLAEQEKIFDNFEKLKNQIQKIFPYE-------IVNNYD 116

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           W  +I  ID LRE G   +   M + E V+ +      +SF EF+YM+LQ  DF  L   
Sbjct: 117 WTKNIMAIDFLREFGKHITAGYMSNKELVKRQFA--TGISFTEFSYMLLQGMDFYHLFTT 174

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKE 250
               LQ+ GSDQWGN+  GIDL  +    ++FA+T PL+T   G K GK+   AIW+++ 
Sbjct: 175 KGVTLQIAGSDQWGNMTTGIDLVRKKTGEEVFAMTMPLITDEEGKKFGKSEGNAIWISEN 234

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMV 310
             +P     +  N+ D  V+S  K+LT L   +I+ +          A+ I+A  +T  +
Sbjct: 235 KNTPEELHNFLLNVSDDIVISLLKKLTFLSRKDIEEIESRHKNGTGYAQGILADTVTFDI 294

Query: 311 HG 312
           HG
Sbjct: 295 HG 296


>gi|289621439|emb|CBI52222.1| unnamed protein product [Sordaria macrospora]
          Length = 692

 Score =  181 bits (460), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 120/370 (32%), Positives = 188/370 (50%), Gaps = 34/370 (9%)

Query: 11  ILSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
           +  ERG++   +   E +  L     + AY+G D TA SLH GHL  LM LFW+   G+K
Sbjct: 70  LFKERGYVKDTAGKDEQIAELMRTRRIGAYVGIDPTAPSLHVGHLLPLMPLFWMYLEGYK 129

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKI--------KGIFSSFIKYGTGKT 121
             +L+GG T+ IGDP+ R  SR  + S +   N+ KI        + +       G    
Sbjct: 130 AFTLIGGSTAKIGDPTGRLTSRDKLSSSDATMNMTKIHYQLKKLWENVDIQMRARGYEAD 189

Query: 122 DALM---LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMI 178
            A M   +NN  W      +++LR +G    V  MLS ++V++++ +   +SF EF+Y I
Sbjct: 190 WARMRGIVNNNHWWNKQPMLEVLRRVGQALRVGPMLSRDTVKNKMTKGDGVSFAEFSYPI 249

Query: 179 LQAYDFVELAKNYDCRLQMGGSDQWGNIICGI-----------DLGERLK-TPKL----- 221
           +Q +D+ EL      ++Q+GGSDQ+GNII G+           D  ER    PK      
Sbjct: 250 MQGWDWFELFYQRGVQMQIGGSDQYGNIISGLEVVKAARDSEPDPQERQHIVPKTVMDEC 309

Query: 222 FALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPM 281
              T PLLT +SG K GK+   AIWL+   TS ++F+ Y+    D +V    K  T +P 
Sbjct: 310 VGFTVPLLTDSSGAKFGKSAGNAIWLDPYQTSVFDFYGYFVRRTDEEVEKLLKLFTFMPT 369

Query: 282 SEIDRMAKLQGKEINE--AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI 339
           SEI ++ +   K+ ++  A+  +A E+ T+VHG++EA  A       +   + +  +P +
Sbjct: 370 SEITKVMEEHVKDPSKRVAQHALAREVATLVHGQQEATAAEKQHRLMYSGQMANPQVPRL 429

Query: 340 SISKDEVSRG 349
              KD ++ G
Sbjct: 430 ---KDAITGG 436


>gi|198436589|ref|XP_002122779.1| PREDICTED: similar to GE11414 [Ciona intestinalis]
          Length = 514

 Score =  181 bits (459), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 123/432 (28%), Positives = 199/432 (46%), Gaps = 35/432 (8%)

Query: 12  LSERGFIHQISNPRELDI--LCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
           L ERG +  I  P  + +  L        Y G+D TA  LH G+L  +M+L   Q+ GH 
Sbjct: 64  LHERGILQDIYPPAAVGLPGLLESKQQCFYCGFDPTADGLHVGNLLSIMVLLHCQRAGHN 123

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN-------IEKIKGIFSSFI---KYGTG 119
            I+++G  T   GDPS   + R M+    IQ+N       I KI    +++I   K+   
Sbjct: 124 VIAVIGNATVRAGDPSEHTKDRNMLSDNAIQDNVNAIQDCIAKIADTHANYIYDNKHRKK 183

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
             D  +L N+TW   +  ID +      F +  M+    ++ R++  + L   EF Y +L
Sbjct: 184 LPDFKILFNQTWYKELNAIDFISTACRNFRIGPMMEKRYIKDRIQSSEGLMLAEFMYQVL 243

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK 239
           QAYD+  L  NY+C  Q+GG DQ GNI  G  L  +    +++AL +PL+T   G K+GK
Sbjct: 244 QAYDWQYLHDNYNCTFQVGGVDQLGNINAGQQLIRKTNKGQVYALLTPLVTNLRGQKLGK 303

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINE 297
           T   ++WLN   T P+ F+Q++    D+ V +F K  T + +  I+   +   +   +  
Sbjct: 304 TAGNSVWLNANKTPPFEFYQFFFKQPDSMVETFLKYFTFIDLKRINEIMIEHTKHPHLRN 363

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
           A++I+A  +  +VHG E  E A       F  S+         +S++E+       T IV
Sbjct: 364 AQRILAKHVCKLVHGPEGLESAERCTRALFGGSLEDIE----KLSEEEIMTTFN-ATNIV 418

Query: 358 KAGFATST---------------NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNI 402
            A     T               N+    +++  ++IN   + +  L +   +     ++
Sbjct: 419 TAVLEPDTTVYDVATHAKAIPLGNKGENLIRAGGVRINGETVDSPHLILMNGEHVLKNDL 478

Query: 403 K-LSFGKKNHII 413
             LS GK NH I
Sbjct: 479 TVLSVGKTNHFI 490


>gi|225012587|ref|ZP_03703022.1| Tyrosine--tRNA ligase [Flavobacteria bacterium MS024-2A]
 gi|225003120|gb|EEG41095.1| Tyrosine--tRNA ligase [Flavobacteria bacterium MS024-2A]
          Length = 266

 Score =  181 bits (459), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 97/266 (36%), Positives = 150/266 (56%), Gaps = 18/266 (6%)

Query: 169 LSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPL 228
           +SF EF Y +LQ YDF+ L K  DCRLQMGGSDQWGNI  G +L  R +  K +A+T PL
Sbjct: 1   MSFTEFTYQLLQGYDFLHLFKTLDCRLQMGGSDQWGNITTGTELIRRKEGGKAYAITCPL 60

Query: 229 LTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA 288
           +  A G+K GKT  G IWL+K+ TSPY F+Q+W N  D D +++ K  T L   EI+ ++
Sbjct: 61  IKKADGSKFGKTEGGNIWLDKKRTSPYKFYQFWLNTSDEDALNYIKIFTFLSQDEINSIS 120

Query: 289 KLQGKEINEA--KKIIATEITTMVHGREEAEKAATAAMECFDMSIHS------------- 333
           K   +  ++   +  IA E+TT+VHG EE +KA  A+   F  +                
Sbjct: 121 KEHAEAPHQRLLQNTIANEVTTLVHGLEELQKAQEASQILFGRATSEAFQKLTPETFLEL 180

Query: 334 -QHMPTISISKDEVSRGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
            + +P  +I++  ++ G+ ++  +   +GF +S ++ARR LK NAI +N + + ++   I
Sbjct: 181 FEGVPQANINRKTINEGLDIIAALSSMSGFLSSNSDARRALKENAISVNKTKV-DQDFMI 239

Query: 392 KLQDFDSTGNIKLSFGKKNHIICHLC 417
           +         + L  GKKN+ +  + 
Sbjct: 240 QQSHLIGGQYVLLQRGKKNYFVLKIV 265


>gi|46107722|ref|XP_380920.1| hypothetical protein FG00744.1 [Gibberella zeae PH-1]
          Length = 611

 Score =  179 bits (454), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 110/338 (32%), Positives = 176/338 (52%), Gaps = 28/338 (8%)

Query: 11  ILSERGFIHQIS-NPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
           IL ERG+I  ++  P ++  +     + +Y+G D TA S+H GHL  +M +FW+   G+ 
Sbjct: 66  ILQERGYIKDVAGTPDKIKEIMRVKRIGSYVGIDPTADSMHVGHLLPMMPMFWMWFHGYP 125

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIK----GIFSSFI----KYGTGKT 121
            ++L+GG T+ IGDP+ R ESR+++ + +I +NI KI      I+S+      KYG    
Sbjct: 126 AVTLIGGSTARIGDPTDRLESRQILSNADISKNITKIHLQLTRIWSNVHVLKEKYGYPND 185

Query: 122 DAL---MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMI 178
            A    +LNN  WL ++   D  + I     +  ML+ ++V+ ++     +S  EF Y +
Sbjct: 186 WAATHRLLNNNMWLGNLTLYDFAKRIARHTRIGPMLAKDTVKRKMTEGDGMSLGEFMYPL 245

Query: 179 LQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL---------GERLKTPKLF-----AL 224
           LQ +DF  +      ++Q+GGSDQ+GNI  GID             LK P  +       
Sbjct: 246 LQGWDFWHMYNKLGIQMQIGGSDQYGNITAGIDALKTIRETEEAPHLKKPSTWDHEPVGF 305

Query: 225 TSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI 284
           T PLLT ASG K GK+   A+WL++  T+ ++ + Y+    D +V    K  T +PM  I
Sbjct: 306 TVPLLTDASGAKFGKSAGNAVWLDEFKTTAFDLYGYFVRRSDDEVEKLLKMFTFMPMETI 365

Query: 285 DRMAKLQGKEINE--AKKIIATEITTMVHGREEAEKAA 320
             + +       E  A+  +A ++ ++VHG E A K A
Sbjct: 366 STLMEQHRANPQERKAQHALAFDVVSLVHGSERAVKEA 403


>gi|121707082|ref|XP_001271726.1| tyrosyl-tRNA synthetase, mitochondrial precursor (tyrosine--tRNA
           ligase) (tyrrs) [Aspergillus clavatus NRRL 1]
 gi|119399874|gb|EAW10300.1| tyrosyl-tRNA synthetase, mitochondrial precursor (tyrosine--tRNA
           ligase) (tyrrs) [Aspergillus clavatus NRRL 1]
          Length = 622

 Score =  179 bits (454), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 122/420 (29%), Positives = 209/420 (49%), Gaps = 37/420 (8%)

Query: 5   KSDFLSILSERGFIHQISNPREL-DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           +  F+  L ERG IH +   R+L + + ++     Y+G D TA SLH GH+   ++L W 
Sbjct: 91  RKSFIRHLEERGLIHDVVGERDLLERIFTEKRAGIYVGIDPTAPSLHVGHMLPFIILAWG 150

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIK------GIFSSF--IK 115
              G     L+GG TS +GDP+ R + R  M +   + N+  +       G+ +    ++
Sbjct: 151 YVWGLPVTYLIGGATSKVGDPTGRLKGREQMNASVRKANMANMHMQLKKLGVSAELYGVE 210

Query: 116 YGTGKT---DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFL 172
           +G  K       + NN  W     +ID+LR++G+   +  ML  E+V++RL +   +SF 
Sbjct: 211 HGYKKERFWKRALANNSIWWNGTAFIDVLRDLGNHVRLGPMLGRETVKNRLAKGDGMSFA 270

Query: 173 EFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL--KTP----------- 219
           EF+Y ++QA+D+  L +    ++Q+GGSDQ+GNI+ G++  + +   TP           
Sbjct: 271 EFSYPLMQAWDWWVLFRK-GVQVQVGGSDQYGNILFGMEAVKMISKNTPIEEDQNPLEDD 329

Query: 220 --KLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT 277
             K    T+PLLT  +G K GK+   A+WL+K+MTS +  +Q++    D  V S+ K  T
Sbjct: 330 LDKPIGFTTPLLTAPNGEKFGKSAGNAVWLDKDMTSTFELYQFFVRTPDDVVESYLKMFT 389

Query: 278 TLPMSEIDRM--AKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECF---DMSIH 332
            LP+ +I  +   ++Q      A+  +A E   +VHG++EA+  AT   + F     +  
Sbjct: 390 FLPLPKIAEIMAEQIQDPSKRVAQHTLAHEFLWLVHGKKEADAVATQHRQLFRSRTSTAE 449

Query: 333 SQHMPTIS--ISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQ 390
              +P +S   S    S   G +       +A  TN A  ++ S  + +  S++ N+   
Sbjct: 450 PTPLPKVSSPPSSHANSPTAGFVNPQSGNKYAPQTNFA--NMGSPHVTLPRSLVFNQPFH 507


>gi|242786648|ref|XP_002480847.1| tyrosyl-tRNA synthetase, mitochondrial precursor (tyrosine--tRNA
           ligase) (tyrrs) [Talaromyces stipitatus ATCC 10500]
 gi|218720994|gb|EED20413.1| tyrosyl-tRNA synthetase, mitochondrial precursor (tyrosine--tRNA
           ligase) (tyrrs) [Talaromyces stipitatus ATCC 10500]
          Length = 632

 Score =  179 bits (453), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 115/349 (32%), Positives = 187/349 (53%), Gaps = 31/349 (8%)

Query: 8   FLSILSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           FL  L ER  ++Q+  PRE LD + +      Y G D TA SLH GH+  +M+L W    
Sbjct: 88  FLDHLEERELVNQVVGPREVLDKVFTDKRTGLYTGIDPTAPSLHVGHMLPIMVLAWAFNW 147

Query: 67  GHKPISLMGGGTSIIGDPSFRDESR----RMMRSQEIQENIEKIKGIFSSFIKYGTGKT- 121
           G+    ++GG T+  GDP+ R   R    R +R+  +     ++K I +S   YG     
Sbjct: 148 GYPIHFILGGATARFGDPTGRLGPRQTEHRSVRTANMASMHMQLKRISASIEDYGRRHGY 207

Query: 122 ------DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFN 175
                    + NN  W     ++++LR++G    +  ML  ++V++RL+    +SF EF+
Sbjct: 208 KKEWAWRRALTNNNVWWNGTPFVEVLRDLGMHMRLGPMLGRDTVKTRLE-GNGMSFAEFS 266

Query: 176 YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL---------KTP------K 220
           Y ++QA+D+ EL K    ++Q+GGSDQ+GNI+ G++  ++          + P      K
Sbjct: 267 YPLMQAWDWWELFKK-GVQVQVGGSDQFGNILFGMEAVKQTAKNTAIEIDRRPVEEDADK 325

Query: 221 LFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLP 280
              LT+PLLTT+SG K+GK+   A+WL+K+MTS +  +QY+    D  V  + K  T LP
Sbjct: 326 PAGLTTPLLTTSSGEKIGKSAGNAVWLDKDMTSTFELYQYFVRTPDDQVERYLKMFTFLP 385

Query: 281 MSEIDRMAKLQGKEINE--AKKIIATEITTMVHGREEAEKAATAAMECF 327
           + +I ++ +   ++ ++  A+  +A E   +VHG  EAE AAT   + F
Sbjct: 386 LDKITQLMEETRQDPSKRVAQHALAREFVDIVHGPIEAEAAATQHRQLF 434


>gi|50554259|ref|XP_504538.1| YALI0E29139p [Yarrowia lipolytica]
 gi|49650407|emb|CAG80141.1| YALI0E29139p [Yarrowia lipolytica]
          Length = 527

 Score =  178 bits (452), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 99/328 (30%), Positives = 173/328 (52%), Gaps = 26/328 (7%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L +R  +  ++    L+    Q   + Y+G D +  S+H GH+  +M++  L   G
Sbjct: 54  LLQYLKDRNLVANVTE-DSLEQQLQQKFTSFYLGIDPSGPSMHLGHMVPVMIMLHLFLRG 112

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIK-GIFSSF-----------IK 115
           H   +L+GG T  +GDP+ + E R+ +    +Q N++ +   +  +F           + 
Sbjct: 113 HYAFALVGGATGAVGDPTGKTEERKTVVKDTLQYNLDALATSLERTFLHAVAAAKKEGVY 172

Query: 116 YGTG-KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEF 174
           YG   K    ++NN  W  ++ +++ L   G    VN+M++ +SV+ RL     + + EF
Sbjct: 173 YGDQIKLQYAIVNNHDWWKNVGFLEFLASYGRLIRVNQMMARDSVKDRLNSATGIGYNEF 232

Query: 175 NYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL-------KTPKLFALTSP 227
           +Y ILQA+DF  L +   C LQ+GG DQWGNI  G+DL +R        +TP  + +T+ 
Sbjct: 233 SYQILQAFDFWHLFETQGCSLQLGGGDQWGNITAGVDLTKRAAAVNNLKETP--YGITTQ 290

Query: 228 LLTTASGTKMGKTLSGA-IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR 286
           L+ + SG K+GK+ + A IWLN EMT P+  +QY     D DV  + K  T + + +I  
Sbjct: 291 LMLSKSGKKLGKSENNATIWLNPEMTRPFELYQYLLKTADEDVEQYLKMFTFVSLEDIAT 350

Query: 287 MAK--LQGKEINEAKKIIATEITTMVHG 312
           + +   + + +  A++++A + T ++HG
Sbjct: 351 IMRQHAENESLRYAQRVLADKFTALIHG 378


>gi|72080405|ref|YP_287463.1| tyrosyl tRNA synthetase [Mycoplasma hyopneumoniae 7448]
 gi|97201630|sp|Q4A8U9|SYY_MYCH7 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|71913529|gb|AAZ53440.1| tyrosyl tRNA synthetase [Mycoplasma hyopneumoniae 7448]
          Length = 414

 Score =  178 bits (452), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 126/401 (31%), Positives = 206/401 (51%), Gaps = 41/401 (10%)

Query: 5   KSDFLSILSERGFIHQISNPREL-DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           K +FL+ L  R  +  IS+P +  ++   QG+   YIG+D TA+SLH G+   + LL  L
Sbjct: 6   KQEFLAELKTRNILKDISSPEKFFNLKPDQGI---YIGFDPTATSLHLGNYISISLLKRL 62

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           QK G K ++++GG T +IGDPSF  + R+++  + +  N EKIK    SF          
Sbjct: 63  QKIGIKVLAVIGGATGMIGDPSFSSKERKLLDFKTLNANKEKIKKQLESF--------GL 114

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            + +N     ++  +D LR++G   +++ +L+ ESV SR+  E  LSF EF+Y ++Q +D
Sbjct: 115 PVFDNFEIYKNMNILDFLRDVGKNINISYLLAKESVASRI--EVGLSFTEFSYQLIQGWD 172

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERL---KTPKLFALTSPLLTTASGTKMGKT 240
           F  LA+NY    Q GGSDQWGN++ G+D  ++    +  + F  T+ LLT  +G K GK+
Sbjct: 173 FKFLAENYRIIGQAGGSDQWGNMVTGLDFIKKSNLDQKDEAFVFTTNLLTDENGQKFGKS 232

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           L   IWL+ EM SP++ +Q+  N  D         L+ L +  I+ +     K+  + ++
Sbjct: 233 LGKPIWLDPEMYSPFHLYQFLLNQSDEQAEKIMLWLSFLDLKVINELIFKHKKD--KKQR 290

Query: 301 I----IATEITTMVHGR---EEAEKAATAAMECFDMSIHS--------QHMPTISISKDE 345
           I    +A ++   +HG    E A+K      E  D +  +        + +P   +S   
Sbjct: 291 ILQYNLAKQVVFDIHGDKGLEIAKKITKILFEKLDYTKITFNDKLELKKIIPYFKVSFFN 350

Query: 346 VSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISN 386
            ++       I+  G   S  E    +   A++IN S ISN
Sbjct: 351 ANQ-------IIDLGIFKSKRELNEFISHKALEINGSKISN 384


>gi|295657588|ref|XP_002789361.1| tyrosyl-tRNA synthetase [Paracoccidioides brasiliensis Pb01]
 gi|226283881|gb|EEH39447.1| tyrosyl-tRNA synthetase [Paracoccidioides brasiliensis Pb01]
          Length = 592

 Score =  177 bits (450), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 125/441 (28%), Positives = 210/441 (47%), Gaps = 52/441 (11%)

Query: 5   KSDFLSILSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           +  FL ++ ERG ++++   R+ L+ + ++  V  Y G D TA SLH GH+   M+L W 
Sbjct: 82  RKSFLELMEERGLVNKVVGDRDALNKMWTERRVGVYAGVDPTAPSLHIGHMLPFMVLAWA 141

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESR----RMMRSQEIQENIEKIKGIFSSFIKYGTG 119
              G + + L+GG TS IGDP+ R++ R    R+ R + +     ++K +  S  +YG  
Sbjct: 142 YVHGIRAVFLLGGSTSQIGDPTDREDPRAKQARVTRKENMVNMHLQLKTLGMSIERYGAK 201

Query: 120 KTDAL-------MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFL 172
              A        ++NN TW     ++++++ +G    +  ML  ++V++RL+  + +S  
Sbjct: 202 HGYAYEPIWRRAIVNNNTWWLKEPFMEVMKTMGESARLGPMLGRDTVKNRLQSGKGMSLA 261

Query: 173 EFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE----------RLKTPK-- 220
           EF Y +LQA+D+ +L +  +  +Q+GGSDQ GNI  GID  +          R   PK  
Sbjct: 262 EFTYPLLQAWDWWQLIQQQNVLVQVGGSDQAGNIQFGIDATKSLMKADQDYWRKHAPKPE 321

Query: 221 ------LFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAK 274
                     T+PLLTT SG K GKT   A+WL+K+MT  ++ +Q++  + D +V  + K
Sbjct: 322 DREILEPMGFTTPLLTTPSGEKFGKTAGNAVWLDKDMTPTFDLYQFFIRVPDENVEQYLK 381

Query: 275 RLTTLPMSEIDRM--AKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIH 332
             T LP+  I  +    ++      A+  +A+E   ++ G  EA +A       F   I 
Sbjct: 382 YFTFLPIPAIKEIMVQHMEDPSKRVAQHKLASEFVELMRGPAEAAQAEKDHRSLFGGQIS 441

Query: 333 S----QHMPTISISKDEVSR----------------GMGLLTLIVKAGFATSTNEARRHL 372
           +    +  P   I+  E S                 G     ++  AG A+S  EA R +
Sbjct: 442 TAPEMEARPKRDINLSETSPFNAPSPHVTLPRSLVVGQFFHKVLWSAGLASSKAEAMRLI 501

Query: 373 KSNAIKINNSIISNEKLQIKL 393
             N   + +   S   +  KL
Sbjct: 502 LHNGAAVASRSDSKATMDDKL 522


>gi|83769101|dbj|BAE59238.1| unnamed protein product [Aspergillus oryzae]
          Length = 489

 Score =  175 bits (444), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 106/317 (33%), Positives = 174/317 (54%), Gaps = 29/317 (9%)

Query: 39  YIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQE 98
           Y G D TA SLH GH+   M+L W    G     ++GG TS +GDP+ R + R  + S  
Sbjct: 2   YAGVDPTAPSLHVGHMLPFMVLAWGYVWGLPVTWVLGGATSRVGDPTGRLKGREQVHSSV 61

Query: 99  IQENIE----KIKGIFSSFIKYGT----GKTDAL---MLNNETWLCSIKYIDLLREIGSF 147
            + N+     ++K + +S  +YG      K  A    ++NN TW   + +I++LR++G+ 
Sbjct: 62  RKANMASMHMQLKKLGASIEQYGKRHGYEKKWAWKRSLVNNNTWWNKVPFIEVLRDLGAH 121

Query: 148 FSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNII 207
             +  ML  E+V++RL +   +SF EF+Y +LQA+D+  L K    ++Q+GG+DQ+GNI+
Sbjct: 122 MRLGPMLGRETVKNRLSKGDGMSFSEFSYPLLQAWDWWVLFKK-GVQVQVGGTDQYGNIL 180

Query: 208 CGID---------LGERLKTP------KLFALTSPLLTTASGTKMGKTLSGAIWLNKEMT 252
            G+D           E+ + P          LT+PLLT  +G K GK+   AIWL+K+MT
Sbjct: 181 FGMDSVKAISKNTAMEQERDPLENDIDNPIGLTTPLLTAPNGEKFGKSAGNAIWLDKDMT 240

Query: 253 SPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATEITTMV 310
           S +  +Q++    D  V  + K  T LP+ EI ++ + Q K+ ++  A+  +A E   ++
Sbjct: 241 STFELYQFFVRTPDDVVERYLKMFTFLPLPEIAKLMEEQNKDPSKRVAQHALAAEFVELI 300

Query: 311 HGREEAEKAATAAMECF 327
           HG++EA+  A    + F
Sbjct: 301 HGKQEADAVALQHRQLF 317


>gi|68073779|ref|XP_678804.1| tyrosine--tRNA ligase [Plasmodium berghei strain ANKA]
 gi|56499388|emb|CAH96531.1| tyrosine--tRNA ligase, putative [Plasmodium berghei]
          Length = 548

 Score =  175 bits (443), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 142/486 (29%), Positives = 218/486 (44%), Gaps = 84/486 (17%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILC------SQGVVTAYIGYDLTASSLHAGHLTQLM 58
           KS+ L  L ER  I+ IS+ + +D +       ++   + YIG DL    LH G LTQL 
Sbjct: 56  KSNALKKLYERKLINYISDLKNIDKILYENEHENEKKKSVYIGIDLNCKYLHIGSLTQLK 115

Query: 59  LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG- 117
            L  L+      I L+G  T+ IGDPSF+   R+   + EI +N + IK     FI    
Sbjct: 116 TLEILRSYKTDVIILLGNSTTQIGDPSFQLNERKETLNAEICQNEQSIKESIIDFILNND 175

Query: 118 -------------------------------------------TGKTDALMLNNETWLCS 134
                                                      +GK +  +L N  W   
Sbjct: 176 NSDFNEKDLHMKELCGINLNQISFQDICRKTDLLSKDEIIYKCSGKGNLRILKNNIWYDK 235

Query: 135 IKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCR 194
           +  ID L+  G  F +N++L  ESV  +  + ++L+  + NY+ LQ+YDF+ L K Y   
Sbjct: 236 MNVIDFLK-YGEHFGINKLLRKESVIKKY-QNKNLTLKDLNYISLQSYDFLHLFKKYKTY 293

Query: 195 LQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL-----SGAIWLNK 249
           +Q+GGSDQWGNI  GI+L + +   +L+ LT+ LL   +  K  K+L        IW++K
Sbjct: 294 IQIGGSDQWGNIQSGIELCQNIYNQQLYGLTTNLLLYKNNIKFSKSLFQENKKLPIWIDK 353

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE-------------IN 296
           E TSPY FW + RN++D  V S+   LT L ++ +D   K    E             IN
Sbjct: 354 EYTSPYLFWNFLRNVEDQKVQSYIDMLTNLNIN-LDEELKNSNNENPKNIIASSYDNIIN 412

Query: 297 EAKKIIATEITTMVHGR---EEAEKAATAAMECFDMSIHSQH----MPTISISKDEVSRG 349
             KK +A  IT  ++G+   ++  K            I +      +P   I+ + + + 
Sbjct: 413 SVKKKMADHITNTIYGKCVVDKIHKINKIIKNNKFNEIENLQELKILPYNQININLIKQN 472

Query: 350 MGLLTLIVKA-GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN-----IK 403
              +T ++K    A +  EA+  +  N I IN  +I+N K  + + DF  T N     + 
Sbjct: 473 KINITDVLKLFQIAMTNKEAKEKINQNCIYINTKLITNPKYILNIMDFLKTKNDNYYYVL 532

Query: 404 LSFGKK 409
           L  GKK
Sbjct: 533 LRLGKK 538


>gi|240281680|gb|EER45183.1| tyrosyl-tRNA synthetase [Ajellomyces capsulatus H143]
 gi|325087830|gb|EGC41140.1| tyrosyl-tRNA synthetase [Ajellomyces capsulatus H88]
          Length = 598

 Score =  174 bits (442), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 129/454 (28%), Positives = 223/454 (49%), Gaps = 60/454 (13%)

Query: 5   KSDFLSILSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           +  FL ++ ERG ++ +   R+ L+ + ++  V  Y+G D TA SLH GH+   M+L W 
Sbjct: 80  RKSFLELMEERGLVNAVIGNRDALNRMWTERRVGVYVGVDPTAPSLHIGHMLPFMVLAWA 139

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIE----KIKGIFSSFIKYGTG 119
              G + + L+GG TS IGDP+ R   R  M S   +EN+     ++K +  S  +YG  
Sbjct: 140 YVHGIRAVFLLGGSTSQIGDPTDRLGPRAKMASFTRKENMANMHLQLKRLGMSIERYGAK 199

Query: 120 KT-------DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFL 172
                       ++NN TW     + ++++ +G    +  ML  ++V++RL+  + ++  
Sbjct: 200 HGYEYEWIWRRAIVNNNTWWLKEPFFEVMKTMGEAVRLGPMLGRDTVKNRLQSGKGMALS 259

Query: 173 EFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE----------RLKTP--- 219
           EF Y +LQA+D+ +L +  +  +Q+GGSDQ GNI  G+D  +          R   P   
Sbjct: 260 EFVYPLLQAWDWWQLIQQQNVLVQVGGSDQAGNIQFGMDATKPLMKASNEYWRKHAPNPE 319

Query: 220 -----KLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAK 274
                +    T+PLLTT SG K GK+   A+WL+++MTS ++ +Q++  + D +V  + K
Sbjct: 320 DRELLEPMGFTTPLLTTPSGQKFGKSAGNAVWLDQDMTSSFDLYQFFLRVPDENVEQYLK 379

Query: 275 RLTTLPMSEIDRMAK--LQGKEINEAKKIIATEITTMVHGREEAEKA------------A 320
             T LP++ I  + +  +Q      A+  +A+E   ++ G  EA +A             
Sbjct: 380 YFTFLPITAIKELMERHVQDPSKRVAQHKLASEFVELIRGPVEAAQAEKDHRSIFGGQTP 439

Query: 321 TAAMEC---FDMSIHSQHM-----PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHL 372
           T  ME     D+++   H      P I++ +  V  G     ++  AG A S  EA R +
Sbjct: 440 TIEMEARTKRDLNLSETHPFNAPSPHITLPRSLVV-GQFFHKVLWSAGMAPSKAEAFRLI 498

Query: 373 KSNAIKI----NNSIISNEKL---QIKLQDFDST 399
            +N   +    +++ I ++K+    IK  D D T
Sbjct: 499 VNNGASVASRSDSTAIMDDKMSYVPIKTWDKDMT 532


>gi|322694649|gb|EFY86473.1| Tyrosyl-tRNA synthetase [Metarhizium acridum CQMa 102]
          Length = 624

 Score =  174 bits (441), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 106/338 (31%), Positives = 171/338 (50%), Gaps = 28/338 (8%)

Query: 11  ILSERGFIHQISN-PRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
           +L ERG+I  ++  P ++  +     + AY+G D TA SLH GHL   M LFWL   G+ 
Sbjct: 70  VLDERGYIKDVAGTPAKIKEVMRIKRIGAYVGVDPTADSLHIGHLLPFMPLFWLWFNGYP 129

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKI--------KGIFSSFIKYGTGKT 121
            ++L+GG T+ IGDP+ R +SR  M + EI +N+ KI        + +     KYG  K 
Sbjct: 130 AVTLLGGATARIGDPTGRLQSREHMPNSEISKNVTKIHYQLTRLWRNVVVLREKYGYEKD 189

Query: 122 DAL---MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMI 178
            A    +LNN  WL  +   D  + +     +  MLS ++V+ ++     +S  EF Y +
Sbjct: 190 WAAKRHLLNNNMWLQGLSVYDFTKRLARNTRIGPMLSRDTVKRKMTEGDGMSLGEFMYPL 249

Query: 179 LQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL---------GERLKTP-----KLFAL 224
            Q +DF  +      ++Q+GGSDQ+GNI+ GID              K P     +    
Sbjct: 250 FQGWDFWHMYNKLGVQMQIGGSDQYGNIVAGIDALKVIRDSEEASHAKMPTEWQHEPMGF 309

Query: 225 TSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI 284
           T PLL  ++G K GK+   A+WL++  TSP+  + Y+    D +V    K  T +PM++I
Sbjct: 310 TVPLLLDSAGVKFGKSAGNAVWLDEFKTSPFELYGYFMRRADDEVEKLLKLFTFMPMAQI 369

Query: 285 DRMAKLQGKEINE--AKKIIATEITTMVHGREEAEKAA 320
                    + ++  A+  +A E+ ++V+G + A + A
Sbjct: 370 HETMTQHRADPSKRVAQHTLAFEVLSLVYGSQRALQEA 407


>gi|212543425|ref|XP_002151867.1| tyrosyl-tRNA synthetase, mitochondrial precursor (tyrosine--tRNA
           ligase) (tyrrs) [Penicillium marneffei ATCC 18224]
 gi|210066774|gb|EEA20867.1| tyrosyl-tRNA synthetase, mitochondrial precursor (tyrosine--tRNA
           ligase) (tyrrs) [Penicillium marneffei ATCC 18224]
          Length = 636

 Score =  174 bits (440), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 116/349 (33%), Positives = 186/349 (53%), Gaps = 31/349 (8%)

Query: 8   FLSILSERGFIHQISNPREL-DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           FL  L ER  ++Q+   REL D + +      Y G D TA SLH GH+  +M+L W    
Sbjct: 88  FLDHLEERELVNQVVGGRELLDKVFTDKRTGLYTGVDPTAPSLHVGHMLPIMVLAWAFNW 147

Query: 67  GHKPISLMGGGTSIIGDPSFRDESR----RMMRSQEIQENIEKIKGIFSSF----IKYGT 118
           G+    ++GG T+  GDP+ R   R    R +R   +     ++K I +S      +YG 
Sbjct: 148 GYPVHFILGGATARFGDPTGRLGPRATEHRSVRVANMAAMHMQLKRISASIEDYGRRYGY 207

Query: 119 GKTDAL---MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFN 175
            K  A    + NN  W     ++++LR++G    +  ML  ++V++RL+    +SF EF+
Sbjct: 208 VKEWAWKRALTNNNVWWNKTPFVEVLRDLGMHMRLGPMLGRDTVKTRLE-GSGMSFAEFS 266

Query: 176 YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL---------KTP------K 220
           Y ++QA+D+ EL K    ++Q+GG+DQ+GNI+ G+D  + +         + P      K
Sbjct: 267 YPLMQAWDWWELFKK-GVQVQVGGADQFGNILFGMDAVKHVAKNTAIEIDRRPVEDDVDK 325

Query: 221 LFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLP 280
              LT+PLLTT+SG K+GK+   A+WL+K+MTS +  +QY+    D  V  + K  T LP
Sbjct: 326 PVGLTTPLLTTSSGEKIGKSAGNAVWLDKDMTSTFELYQYFVRTPDDVVEKYLKMFTFLP 385

Query: 281 MSEIDRMAKLQGKEINE--AKKIIATEITTMVHGREEAEKAATAAMECF 327
           + +I  +     ++ ++  A+  +A E   +VHG  EAE AAT   + F
Sbjct: 386 LEKIAEIMAESTQDPSKRIAQHALAKEFVDIVHGPIEAEAAATQHRQLF 434


>gi|225556817|gb|EEH05105.1| tyrosyl-tRNA synthetase [Ajellomyces capsulatus G186AR]
          Length = 598

 Score =  173 bits (439), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 127/454 (27%), Positives = 223/454 (49%), Gaps = 60/454 (13%)

Query: 5   KSDFLSILSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           +  FL ++ ERG ++ +   R+ L+ + ++  V  Y+G D TA SLH GH+   M+L W 
Sbjct: 80  RKSFLELMEERGLVNAVIGNRDALNRMWTERRVGVYVGVDPTAPSLHIGHMLPFMVLAWA 139

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIE----KIKGIFSSFIKYGTG 119
              G + + L+GG TS IGDP+ R   R  M S   +EN+     +++ +  S  +YG  
Sbjct: 140 YVHGIRAVFLLGGSTSQIGDPTDRLGPRAKMASFTRKENMANMHLQLRRLGMSIERYGAK 199

Query: 120 KT-------DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFL 172
                       ++NN TW     + ++++ +G    +  ML  ++V++RL+  + ++  
Sbjct: 200 HGYEYEWIWRRAIVNNNTWWLKEPFFEVMKTMGEAVRLGPMLGRDTVKNRLQSGKGMALS 259

Query: 173 EFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE----------RLKTP--- 219
           EF Y +LQA+D+ +L +  +  +Q+GGSDQ GNI  G+D  +          R   P   
Sbjct: 260 EFVYPLLQAWDWWQLIQQQNVLVQVGGSDQAGNIQFGMDATKPLMKASNEYWRKHAPNPE 319

Query: 220 -----KLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAK 274
                +    T+PLLTT SG K GK+   A+WL+++MTS ++ +Q++  + D +V  + K
Sbjct: 320 DRELLEPMGFTTPLLTTPSGQKFGKSAGNAVWLDQDMTSSFDLYQFFLRVPDENVEQYLK 379

Query: 275 RLTTLPMSEIDRMAK--LQGKEINEAKKIIATEITTMVHGREEAEKA------------A 320
             T LP++ I  + +  +Q      A+  +A+E   ++ G  EA +A             
Sbjct: 380 YFTFLPITAIKELMERHVQDPSKRVAQHKLASEFVELIRGPVEAAQAEKDHRSIFGGQTP 439

Query: 321 TAAMEC---FDMSIHSQHM-----PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHL 372
           T  ME     D+++   H      P I++ +  V  G     ++  AG A S  EA R +
Sbjct: 440 TIEMEARTKRDLNLSETHPFNAPSPHITLPRSLVV-GQFFHKVLWSAGMAPSKAEAFRLI 498

Query: 373 KSNAIKI----NNSIISNEKL---QIKLQDFDST 399
            +N   +    +++ + ++K+    IK  D D T
Sbjct: 499 VNNGASVASRSDSTAVMDDKMSYVPIKTWDKDMT 532


>gi|304372917|ref|YP_003856126.1| Tyrosyl tRNA synthetase 1 [Mycoplasma hyorhinis HUB-1]
 gi|304309108|gb|ADM21588.1| Tyrosyl tRNA synthetase 1 [Mycoplasma hyorhinis HUB-1]
 gi|330723495|gb|AEC45865.1| tyrosyl-tRNA synthetase [Mycoplasma hyorhinis MCLD]
          Length = 418

 Score =  173 bits (438), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 129/436 (29%), Positives = 224/436 (51%), Gaps = 50/436 (11%)

Query: 5   KSDFLSILSERGFIHQISNPREL-DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           K + L  +  RG +  IS+ ++L ++  ++G+   Y+G+D TA SLH G+   + L    
Sbjct: 4   KEELLKEIKLRGILKDISDEKKLLNMRQNEGI---YVGFDPTAKSLHLGNYILINLAQRF 60

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q+ G K I+++GG T +IGDPSF  + R ++ ++ I +N         ++IK    K D 
Sbjct: 61  QRAGVKTIAVLGGATGMIGDPSFVSKERVLLSNEAIIKN--------KNYIKAQLEKFDL 112

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            + +N      +  +D LR++G   +V  +L+ +S+ SR+K    LSF EF+Y ++QA+D
Sbjct: 113 QVFDNFDIYKDMNVLDFLRDVGKNVNVALLLTKDSIASRIKT--GLSFTEFSYQLIQAWD 170

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGID------LGERLKTPKLFALTSPLLTTASGTKM 237
           F  L   ++   Q+GGSDQWGNI+ G+D      L ++  +P  F LT+ LLT  +G K 
Sbjct: 171 FKYLFDKFNIVGQLGGSDQWGNIVQGLDMIKKTSLEDKNSSP-CFGLTTQLLTDENGNKF 229

Query: 238 GKTL--SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI 295
           GKT     A+WL+  +TSP+  +Q+  N+ D     F K  +    SEI+++  LQ    
Sbjct: 230 GKTTFDGDALWLDSNLTSPFKLYQFLINLSDFQAEKFFKWTSFKTFSEIEKI--LQKHSQ 287

Query: 296 NEAKKII----ATEITTMVHGREEAEKAATAAMECF-----------DMSIHSQHMPTIS 340
           N+ +K +      EI   +HG++  E+    +   F           D+ + ++ +    
Sbjct: 288 NKKEKFLQHQMTQEIILNLHGQKTLEQCLKISSLLFKNLSFELLNQADLDLLAKSIDNFV 347

Query: 341 ISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSII-SNEKLQIKL-QDFDS 398
           + + E +        +V+    +S  E    +K +A+++N  II S E++  KL Q+F  
Sbjct: 348 LQESEFNANK-----LVELKIFSSKRELNEFIKDSALQVNGQIIKSQEEINSKLKQNF-- 400

Query: 399 TGNIKLSFGKKNHIIC 414
              + +  GKKN  + 
Sbjct: 401 -SKLLIKKGKKNFFVV 415


>gi|240047239|ref|YP_002960627.1| Tyrosyl-tRNA synthetase [Mycoplasma conjunctivae HRC/581]
 gi|239984811|emb|CAT04796.1| Tyrosyl-tRNA synthetase [Mycoplasma conjunctivae]
          Length = 412

 Score =  172 bits (437), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 134/423 (31%), Positives = 215/423 (50%), Gaps = 35/423 (8%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +FL  L  RG +  IS+  +   L  +     YIG+D TASSLH G+   + LL  L++ 
Sbjct: 5   EFLEDLQLRGILKDISDQDKF--LNLEKGKKIYIGFDPTASSLHLGNYIAINLLQRLKQF 62

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
               I+++GG T +IGDPSF  + R ++ +Q + EN  KI      F        +  + 
Sbjct: 63  DIPVIAVVGGATGMIGDPSFASKERVLLSNQTLLENKAKIIAQLQKF--------NLNVF 114

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           +N      +  I+ LR+IG   ++  +L+ +S+ +R+  +  LSF EF+Y ++Q +DF  
Sbjct: 115 DNLEIYKDMNIIEFLRDIGKNINIAYLLAKDSIATRI--QSGLSFTEFSYQLIQGWDFKY 172

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERL---KTPKLFALTSPLLTTASGTKMGKTLSG 243
           L +N++   Q GGSDQWGN++ G+DL ++         F +T  LLT  +G K GKT  G
Sbjct: 173 LYENFNVVAQAGGSDQWGNMVTGLDLIKKTVANHKQDAFVMTVNLLTDENGVKFGKTFGG 232

Query: 244 A-IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKK 300
           + IWL+  M SPYN +Q+  N  DA      K L+  P+S+I+ +     + K+    +K
Sbjct: 233 SPIWLDANMYSPYNLYQFLFNQSDAQAEKIIKWLSFQPLSKINELIVTHNENKKARILQK 292

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISI-SKDEVSRGMGLL------ 353
            +A EI   +HG+        +A+E  D+         IS  +K E+ + + LL      
Sbjct: 293 ELAHEIVANIHGKS----GLKSALEISDILFGKTSYQEISYENKQELKKVLPLLSSANFS 348

Query: 354 --TLIVKAGFATSTNEARRHLKSNAIKINNSIISN-EKLQIKLQDFDSTGNIKLSFGKKN 410
             +LI +  F  S  E    +   A++IN   I++ E +   L+D ++   IK   GKKN
Sbjct: 349 AASLIEQKVF-NSKRELNEFIAQGALEINGQKIAHIEMISANLKDENNLFLIKK--GKKN 405

Query: 411 HII 413
             I
Sbjct: 406 FFI 408


>gi|467158|gb|AAA50922.1| tyrosyl-tRNA synthetase [Mycobacterium leprae]
          Length = 293

 Score =  171 bits (432), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 100/284 (35%), Positives = 159/284 (55%), Gaps = 12/284 (4%)

Query: 138 IDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQM 197
           I+ LR++G  FS+N ML  +++R RL   Q +S+ EF+YM+LQA D+ EL + + C LQ+
Sbjct: 4   IEFLRDVGKHFSINLMLDRDTIRRRLN-GQGISYTEFSYMLLQANDYAELHQRHGCALQI 62

Query: 198 GGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK-TLSGAIWLNKEMTSPYN 256
           GGSDQWGNII G+ L  +     + ALT PL+T A G K+GK T  G++WL+ EMTSPY 
Sbjct: 63  GGSDQWGNIIAGVRLVRQKLGATVHALTVPLVTAADGAKLGKSTGGGSLWLDPEMTSPYA 122

Query: 257 FWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATEITTMVHGRE 314
           ++QY+ N  DADV+ + +  T L   E+  + +       E  A++ +ATE+T +VHG  
Sbjct: 123 WYQYFINTSDADVIRYLRWFTFLLPEELVELEQTTVSRPQERAAQRRLATELTVLVHGAA 182

Query: 315 EAEKAATAAMECF--------DMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
             +    A+   F        D +  +  +    +++ +     G++ L+V +G + S  
Sbjct: 183 ATQAVEHASRALFGQGELARLDEATLATALRETVVAELKPGNPDGIVDLLVASGLSPSRG 242

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            ARR +    + +NN  I +E+   +  DF     + L  GK+N
Sbjct: 243 AARRTIDEGGVLVNNIRIQSEEWTPRTSDFLHGRWLVLRRGKRN 286


>gi|218660716|ref|ZP_03516646.1| tyrosyl-tRNA synthetase [Rhizobium etli IE4771]
          Length = 227

 Score =  170 bits (430), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 77/161 (47%), Positives = 111/161 (68%)

Query: 255 YNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGRE 314
           Y+FWQYWRN +DADV  F K  TTLPM EI R++ + G E+NE KKI+ATE+T ++HGR 
Sbjct: 64  YDFWQYWRNTEDADVPRFLKLFTTLPMDEIARLSAIGGSELNEVKKILATEVTAILHGRP 123

Query: 315 EAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKS 374
            AE+AA  A + F+    S+++P++ I   E+  G+GLL+L+V+AG A S  EARRH++ 
Sbjct: 124 AAEQAAETARKTFEEGGLSENLPSVEIPATELDGGIGLLSLMVRAGLAGSNGEARRHVQG 183

Query: 375 NAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            A++IN+  +S+E+  I   +  + G IKLS GKK HI+  
Sbjct: 184 GAVRINDEAVSDERRLIGSDEITADGVIKLSLGKKKHILIR 224


>gi|239611023|gb|EEQ88010.1| tyrosyl-tRNA synthetase [Ajellomyces dermatitidis ER-3]
          Length = 592

 Score =  170 bits (430), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 120/442 (27%), Positives = 210/442 (47%), Gaps = 54/442 (12%)

Query: 5   KSDFLSILSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           +  FL ++ ERG ++Q+   R+ L+ + ++  V  Y G D TA SLH GH+   M+L W 
Sbjct: 76  RKSFLELMEERGLVNQVIGDRDALNKMWTERRVGVYAGVDPTAPSLHVGHMLPFMVLAWA 135

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIE----KIKGIFSSFIKYGTG 119
              G + + L+GG T  +GDP+ R   R  M +   +EN+     ++K +  S  +Y   
Sbjct: 136 YVHGIRTVFLLGGSTGQVGDPTDRLAPRAKMAAVTRKENMANMHLQLKKLGMSIERYAAK 195

Query: 120 KT-------DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFL 172
                       ++NN +W     + ++++ +G    +  ML  ++V++RL+  + ++  
Sbjct: 196 HGYESEWIWRRAIVNNNSWWLKEPFFEVMKTMGEAVRLGPMLGRDTVKNRLQSGKGMALS 255

Query: 173 EFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL---------------- 216
           EF Y +LQA+D+ +L +  +  +Q+GGSDQ GNI  G+D  + L                
Sbjct: 256 EFVYPLLQAWDWWQLIQQQNILVQVGGSDQAGNIQFGMDATKPLMKANDEYWRKHAPRDE 315

Query: 217 --KTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAK 274
             K  +    T+PLLTTASG K GK+   A+WL+++MTS ++ +Q++  + D +V  + K
Sbjct: 316 DRKLLEPMGFTTPLLTTASGQKFGKSAGNAVWLDQDMTSSFDLYQFFLRVTDENVEQYLK 375

Query: 275 RLTTLPMSEIDRMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECF----- 327
             T LP+  I  + +  +Q      A+  +A+E   ++ G  EA +A       F     
Sbjct: 376 YFTFLPIPAIKELMEQHMQDPSKRIAQHKLASEFVELIRGPAEAAQAEKDHRSIFGGKTP 435

Query: 328 ----------------DMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRH 371
                           + S  +   P I++ +  V  G     ++  AG A S  EA R 
Sbjct: 436 TSDELTPRPKRDINLSETSPFNAPSPHITLPRSLVV-GQFFHKVLWSAGMAPSKAEAFRL 494

Query: 372 LKSNAIKINNSIISNEKLQIKL 393
           + +N   + +   SN  +  KL
Sbjct: 495 VVNNGAAVASRSDSNAIMDDKL 516


>gi|47097761|ref|ZP_00235250.1| tyrosyl-tRNA synthetase [Listeria monocytogenes str. 1/2a F6854]
 gi|47013864|gb|EAL04908.1| tyrosyl-tRNA synthetase [Listeria monocytogenes str. 1/2a F6854]
          Length = 226

 Score =  170 bits (430), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 94/223 (42%), Positives = 129/223 (57%), Gaps = 5/223 (2%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I+Q ++   L     +  ++ Y G D +  S+H GHL   M+L   Q  GH+PI
Sbjct: 7   LEWRGAIYQQTDEEGLRKWVDEKQISLYCGIDPSGDSMHIGHLIPFMILRRFQNAGHRPI 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+GG T  IGDPS + E R++   ++I +N+E ++        +  G + A M+NN  W
Sbjct: 67  ILVGGATGTIGDPSGKKEERQLQSMEQISKNVESLRVQLGKIFDF-EGDSAASMVNNYDW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
              +  +D LR+ G  F+VN MLS + V SRL  E  +SF EF Y ILQA DF  L +  
Sbjct: 126 TKDVSILDFLRDYGKEFNVNTMLSKDIVASRL--EVGISFTEFAYQILQAMDFNHLYEFN 183

Query: 192 DCRLQMGGSDQWGNIICGIDL--GERLKTPKLFALTSPLLTTA 232
           DCRLQ+GGSDQWGNI  G+DL   ++ +  K F LT PLLT A
Sbjct: 184 DCRLQIGGSDQWGNITAGLDLIRKKQGENAKAFGLTIPLLTKA 226


>gi|261206034|ref|XP_002627754.1| tyrosyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081]
 gi|239592813|gb|EEQ75394.1| tyrosyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081]
          Length = 592

 Score =  170 bits (430), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 120/442 (27%), Positives = 210/442 (47%), Gaps = 54/442 (12%)

Query: 5   KSDFLSILSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           +  FL ++ ERG ++Q+   R+ L+ + ++  V  Y G D TA SLH GH+   M+L W 
Sbjct: 76  RKSFLELMEERGLVNQVIGDRDALNKMWTERRVGVYAGVDPTAPSLHVGHMLPFMVLAWA 135

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIE----KIKGIFSSFIKYGTG 119
              G + + L+GG T  +GDP+ R   R  M +   +EN+     ++K +  S  +Y   
Sbjct: 136 YVHGIRTVFLLGGSTGQVGDPTDRLAPRAKMAAVTRKENMANMHLQLKKLGMSIERYAAK 195

Query: 120 KT-------DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFL 172
                       ++NN +W     + ++++ +G    +  ML  ++V++RL+  + ++  
Sbjct: 196 HGYESEWIWRRAIVNNNSWWLKEPFFEVMKTMGEAVRLGPMLGRDTVKNRLQSGKGMALS 255

Query: 173 EFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL---------------- 216
           EF Y +LQA+D+ +L +  +  +Q+GGSDQ GNI  G+D  + L                
Sbjct: 256 EFVYPLLQAWDWWQLIQQQNILVQVGGSDQAGNIQFGMDATKPLMKANDEYWRKHAPRDE 315

Query: 217 --KTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAK 274
             K  +    T+PLLTTASG K GK+   A+WL+++MTS ++ +Q++  + D +V  + K
Sbjct: 316 DRKLLEPMGFTTPLLTTASGQKFGKSAGNAVWLDQDMTSSFDLYQFFLRVTDENVEQYLK 375

Query: 275 RLTTLPMSEIDRMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECF----- 327
             T LP+  I  + +  +Q      A+  +A+E   ++ G  EA +A       F     
Sbjct: 376 YFTFLPIPAIKELMEQHMQDPSKRIAQHKLASEFVELIRGPAEAAQAEKDHRSIFGGKTP 435

Query: 328 ----------------DMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRH 371
                           + S  +   P I++ +  V  G     ++  AG A S  EA R 
Sbjct: 436 TSDELTSRPKRDINLSETSPFNAPSPHITLPRSLVV-GQFFHKVLWSAGMAPSKAEAFRL 494

Query: 372 LKSNAIKINNSIISNEKLQIKL 393
           + +N   + +   SN  +  KL
Sbjct: 495 VVNNGAAVASRSDSNAIMDDKL 516


>gi|302924178|ref|XP_003053830.1| hypothetical protein NECHADRAFT_103243 [Nectria haematococca mpVI
           77-13-4]
 gi|256734771|gb|EEU48117.1| hypothetical protein NECHADRAFT_103243 [Nectria haematococca mpVI
           77-13-4]
          Length = 608

 Score =  170 bits (430), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 113/340 (33%), Positives = 176/340 (51%), Gaps = 32/340 (9%)

Query: 11  ILSERGFIHQIS-NPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
           IL ERG+I  ++ +P ++  +     +  Y+G D TA SLH GHL  LM LF L   GH 
Sbjct: 59  ILQERGYIKDVAGDPEKIKEIMRVKRIGTYVGIDPTADSLHVGHLLPLMPLFLLWFHGHP 118

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSF--------IKYGTGKT 121
            ++L+GG T+ IGDP+ R ESR ++ + EI +NI K+    +          IKYG  K 
Sbjct: 119 AVTLIGGSTARIGDPTGRLESRELITNSEISKNITKMHVQLTKLWTNVQHLRIKYGYEKD 178

Query: 122 DAL---MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMI 178
            A    +LNN  WL S+   D  + I     +  ML  E+V+ ++     +S  EF Y +
Sbjct: 179 WAAKHHLLNNNMWLGSLTLYDFAKRIARHTRIGPMLGKETVKRKMTEGDGMSLGEFIYPL 238

Query: 179 LQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL---------GERLKTPKLF-----AL 224
           LQ +DF  +      ++Q+GGSDQ+GNI  GID             LK P  +       
Sbjct: 239 LQGWDFWHMYNKLGIQMQIGGSDQYGNITAGIDALKTIRDTEEAPHLKMPTTWEYEPMGF 298

Query: 225 TSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI 284
           T PLLT +SG K GK+   AIWL++  TS ++ + Y+    D +V    K  T +P+  I
Sbjct: 299 TVPLLTDSSGAKFGKSAGNAIWLDEFKTSAFDLYGYFVRRSDEEVERLLKLFTFMPLESI 358

Query: 285 DRMAKLQGKEINEAKKI----IATEITTMVHGREEAEKAA 320
            +   ++   +N  +++    +A E+ +++HG ++A + A
Sbjct: 359 TKT--MEQHRVNPQQRVAQHTLAFEVVSLIHGSQKALQEA 396


>gi|322705582|gb|EFY97167.1| tyrosyl-tRNA synthetase [Metarhizium anisopliae ARSEF 23]
          Length = 556

 Score =  169 bits (429), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 103/326 (31%), Positives = 164/326 (50%), Gaps = 27/326 (8%)

Query: 22  SNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSII 81
           S P ++  +     + AY+G D TA SLH GHL   M LFWL   G+  ++L+GG T+ I
Sbjct: 14  STPDKIKEVMRIKRIGAYVGVDPTADSLHIGHLLPFMPLFWLWFHGYPAVTLLGGATARI 73

Query: 82  GDPSFRDESRRMMRSQEIQENIEKI--------KGIFSSFIKYGTGKTDAL---MLNNET 130
           GDP+ R +SR  M + EI +N+ KI        + + +   KYG  K  A    +LNN  
Sbjct: 74  GDPTGRLQSREHMPNSEISKNVTKIHYQLTRLWRNVVALREKYGYEKDWAAKRHLLNNNM 133

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           WL  +   D  + +     +  MLS E+V+ ++     +S  EF Y + Q +DF  +   
Sbjct: 134 WLQGLSVYDFTKRLARNTRIGPMLSRETVKRKMTEGDGMSLGEFMYPLFQGWDFWHMYNK 193

Query: 191 YDCRLQMGGSDQWGNIICGIDL---------GERLKTP-----KLFALTSPLLTTASGTK 236
              ++Q+GGSDQ+GNI+ GID              K P     +    T PLL  ++G K
Sbjct: 194 LGVQMQIGGSDQYGNIVAGIDALKVIRDSEEAPHAKMPTEWQHEPMGFTVPLLLDSAGAK 253

Query: 237 MGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN 296
            GK+   A+WL++  TSP+  + Y+    D +V    K  T +PM++I         + +
Sbjct: 254 FGKSAGNAVWLDEFKTSPFELYGYFMRRPDDEVEKLLKLFTFMPMAQIQETMTQHCADPS 313

Query: 297 E--AKKIIATEITTMVHGREEAEKAA 320
           +  A+  +A E+ ++V+G + A + A
Sbjct: 314 KRVAQHTLAFEVLSLVYGSQRALQEA 339


>gi|154275574|ref|XP_001538638.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
 gi|150415078|gb|EDN10440.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
          Length = 490

 Score =  169 bits (428), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 126/453 (27%), Positives = 218/453 (48%), Gaps = 65/453 (14%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           +  FL ++ ERG ++ +        + ++  V  Y+G D TA SLH GH+   M+L W  
Sbjct: 26  RKSFLELMEERGLVNAVIG------MWTERRVGVYVGVDPTAPSLHIGHMLPFMVLAWAY 79

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIE----KIKGIFSSFIKYGTGK 120
             G + + L+GG TS IGDP+ R   R  M S   +EN+     ++K +  S  +YG   
Sbjct: 80  VHGIRAVFLLGGSTSQIGDPTDRLGPRAKMASFTRKENMANMHLQLKRLGMSIERYGAKH 139

Query: 121 T-------DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLE 173
                      ++NN TW     + ++++ +G    +  ML  ++V++RL+  + ++  E
Sbjct: 140 GYEYEWIWRRAIVNNNTWWLKEPFFEVMKTMGESVRLGPMLGRDTVKNRLQSGKGMALSE 199

Query: 174 FNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE----------RLKTP---- 219
           F Y +LQA+D+ +L +  +  +Q+GGSDQ GNI  G+D  +          R   P    
Sbjct: 200 FVYPLLQAWDWWQLIQQQNVLVQVGGSDQAGNIQFGMDATKPLMKASNEYWRKHAPNPED 259

Query: 220 ----KLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKR 275
               +    T+PLLTT SG K GK+   A+WL+++MTS ++ +Q++  + D +V  + K 
Sbjct: 260 RELLEPMGFTTPLLTTPSGQKFGKSAGNAVWLDQDMTSSFDLYQFFLRVPDENVEQYLKY 319

Query: 276 LTTLPMSEIDRMAK--LQGKEINEAKKIIATEITTMVHGREEAEKA------------AT 321
            T LP++ I  + +  +Q      A+  +A+E   ++ G  EA +A             T
Sbjct: 320 FTFLPITAIKELMERHVQDPSKRVAQHKLASEFVELIRGPVEAAQAEKDHRSIFGGQTPT 379

Query: 322 AAMEC---FDMSIHSQHM-----PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLK 373
             ME     D ++   H      P I++ +  V  G     ++  AG A S  EA R + 
Sbjct: 380 IEMEARTKRDFTLPETHPFNAPSPHITLPRSLVV-GQFFHKVLWSAGMAPSKAEAFRLIV 438

Query: 374 SNAIKI----NNSIISNEKL---QIKLQDFDST 399
           +N   +    +++ + ++K+    IK  D D T
Sbjct: 439 NNGASVASRSDSTAVMDDKMSYVPIKTWDKDMT 471


>gi|213422302|ref|ZP_03355368.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E01-6750]
          Length = 164

 Score =  167 bits (424), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 81/161 (50%), Positives = 107/161 (66%), Gaps = 1/161 (0%)

Query: 113 FIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSF 171
           F+ +  G+  A+  NN  W  S+  +  LR+IG  FSVN+M++ E+V+ RL R+ Q +SF
Sbjct: 3   FLDFDCGENSAIAANNYDWFGSMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDQGISF 62

Query: 172 LEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT 231
            EF+Y +LQ YDF  L K +   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T 
Sbjct: 63  TEFSYNLLQGYDFACLNKLHGVALQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITK 122

Query: 232 ASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSF 272
           A GTK GKT  GA+WL+ + TSPY F+Q+W N  DADV  F
Sbjct: 123 ADGTKFGKTEGGAVWLDPKKTSPYKFYQFWINTADADVYRF 163


>gi|313763460|gb|EFS34824.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL013PA1]
 gi|313816642|gb|EFS54356.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL059PA1]
 gi|314914619|gb|EFS78450.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL005PA4]
 gi|314919425|gb|EFS83256.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL050PA1]
 gi|314920668|gb|EFS84499.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL050PA3]
 gi|314930438|gb|EFS94269.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL067PA1]
 gi|314954509|gb|EFS98915.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL027PA1]
 gi|314957371|gb|EFT01474.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL002PA1]
 gi|315099087|gb|EFT71063.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL059PA2]
 gi|315100533|gb|EFT72509.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL046PA1]
 gi|327452799|gb|EGE99453.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL087PA3]
 gi|327457876|gb|EGF04531.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL083PA2]
 gi|328755357|gb|EGF68973.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL087PA1]
 gi|328757802|gb|EGF71418.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL025PA2]
          Length = 331

 Score =  166 bits (420), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 103/314 (32%), Positives = 163/314 (51%), Gaps = 13/314 (4%)

Query: 93  MMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNR 152
           M   + + E +E IK   S ++    G+  A ++NN  W      +DLLR++G  FSVNR
Sbjct: 1   MNDREVVAEWVESIKDQVSKYVDT-DGRNTAQIVNNYDWTVKYTALDLLRDVGKHFSVNR 59

Query: 153 MLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL 212
           ML+ + V  RL  E  +S+ EF+Y++LQ+ DF EL K Y C LQ G  DQWGNI  G + 
Sbjct: 60  MLARDVVARRL--ESGISYTEFSYVLLQSLDFYELHKRYGCTLQTGAQDQWGNITAGAEF 117

Query: 213 GERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSF 272
             +     +  L +PL+T A GTK GKT SG +W++ E+TS Y F Q++ N +D+ V+ +
Sbjct: 118 IRKTTGDVVHGLVTPLITKADGTKYGKTESGTVWVDPELTSAYAFHQFFLNAEDSKVIEY 177

Query: 273 AKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIATEITTMVHGREEAEKAATAAMECFDM- 329
            K  +     EI+ +A+   +E     A+  +A ++T +VHG E+ + A  AA   F   
Sbjct: 178 LKIFSPRSREEIEDLARKTEEEPWRRAAQHCLADDLTDLVHGVEQRKAAEAAAQAIFGRG 237

Query: 330 SIHSQHMPTISISKDEVS----RGMGLLTLI---VKAGFATSTNEARRHLKSNAIKINNS 382
            +      T+    DE+      G    T++   V AG   + +  RR +      +NN 
Sbjct: 238 ELRDLDERTVLSLSDELGAAHHEGGEYPTVVGAMVAAGVVDTKSAGRRAVAEGGAYLNNV 297

Query: 383 IISNEKLQIKLQDF 396
            +++   ++   DF
Sbjct: 298 KVADPDQRLTDDDF 311


>gi|313773434|gb|EFS39400.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL074PA1]
 gi|313793845|gb|EFS41874.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL110PA1]
 gi|313801235|gb|EFS42493.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL110PA2]
 gi|313808082|gb|EFS46559.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL087PA2]
 gi|313811449|gb|EFS49163.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL083PA1]
 gi|313813583|gb|EFS51297.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL025PA1]
 gi|313819721|gb|EFS57435.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL046PA2]
 gi|313822271|gb|EFS59985.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL036PA1]
 gi|313823736|gb|EFS61450.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL036PA2]
 gi|313829630|gb|EFS67344.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL063PA2]
 gi|313831189|gb|EFS68903.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL007PA1]
 gi|313834849|gb|EFS72563.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL056PA1]
 gi|313840035|gb|EFS77749.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL086PA1]
 gi|314923946|gb|EFS87777.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL001PA1]
 gi|314924567|gb|EFS88398.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL036PA3]
 gi|314962166|gb|EFT06267.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL002PA2]
 gi|314963795|gb|EFT07895.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL082PA1]
 gi|314966013|gb|EFT10112.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL082PA2]
 gi|314968378|gb|EFT12477.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL037PA1]
 gi|314974067|gb|EFT18163.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL053PA1]
 gi|314976753|gb|EFT20848.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL045PA1]
 gi|314978792|gb|EFT22886.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL072PA2]
 gi|314981824|gb|EFT25917.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL110PA3]
 gi|314984475|gb|EFT28567.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL005PA1]
 gi|314986653|gb|EFT30745.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL005PA2]
 gi|314990768|gb|EFT34859.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL005PA3]
 gi|315079647|gb|EFT51637.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL053PA2]
 gi|315081126|gb|EFT53102.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL078PA1]
 gi|315087013|gb|EFT58989.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL002PA3]
 gi|315089188|gb|EFT61164.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL072PA1]
 gi|315090692|gb|EFT62668.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL110PA4]
 gi|315094903|gb|EFT66879.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL060PA1]
 gi|315095242|gb|EFT67218.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL038PA1]
 gi|315104176|gb|EFT76152.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL050PA2]
 gi|315108920|gb|EFT80896.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL030PA2]
 gi|327327980|gb|EGE69749.1| tyrosine--tRNA ligase [Propionibacterium acnes HL103PA1]
 gi|327329577|gb|EGE71336.1| tyrosine--tRNA ligase [Propionibacterium acnes HL096PA3]
 gi|327329579|gb|EGE71337.1| tyrosine--tRNA ligase [Propionibacterium acnes HL096PA2]
 gi|327333962|gb|EGE75678.1| tyrosine--tRNA ligase [Propionibacterium acnes HL097PA1]
 gi|327444359|gb|EGE91013.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL043PA2]
 gi|327444577|gb|EGE91231.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL043PA1]
 gi|327446249|gb|EGE92903.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL013PA2]
 gi|327452167|gb|EGE98821.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL092PA1]
 gi|328752011|gb|EGF65627.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL020PA1]
 gi|328760141|gb|EGF73718.1| tyrosine--tRNA ligase [Propionibacterium acnes HL099PA1]
          Length = 331

 Score =  166 bits (419), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 103/314 (32%), Positives = 163/314 (51%), Gaps = 13/314 (4%)

Query: 93  MMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNR 152
           M   + + E +E IK   S ++    G+  A ++NN  W      +DLLR++G  FSVNR
Sbjct: 1   MNDREVVAEWVESIKDQVSKYVDT-DGRNAAQIVNNYDWTVKYTALDLLRDVGKHFSVNR 59

Query: 153 MLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL 212
           ML+ + V  RL  E  +S+ EF+Y++LQ+ DF EL K Y C LQ G  DQWGNI  G + 
Sbjct: 60  MLARDVVARRL--ESGISYTEFSYVLLQSLDFYELHKRYGCTLQTGAQDQWGNITAGAEF 117

Query: 213 GERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSF 272
             +     +  L +PL+T A GTK GKT SG +W++ E+TS Y F Q++ N +D+ V+ +
Sbjct: 118 IRKTTGDVVHGLVTPLITKADGTKYGKTESGTVWVDPELTSAYAFHQFFLNAEDSKVIEY 177

Query: 273 AKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIATEITTMVHGREEAEKAATAAMECFDM- 329
            K  +     EI+ +A+   +E     A+  +A ++T +VHG E+ + A  AA   F   
Sbjct: 178 LKIFSPRSREEIEDLARKTEEEPWRRAAQHCLADDLTDLVHGVEQRKAAEAAAQAIFGRG 237

Query: 330 SIHSQHMPTISISKDEVS----RGMGLLTLI---VKAGFATSTNEARRHLKSNAIKINNS 382
            +      T+    DE+      G    T++   V AG   + +  RR +      +NN 
Sbjct: 238 ELRDLDERTVLSLSDELGAAHHEGGEYPTVVGAMVAAGVVDTKSAGRRAVAEGGAYLNNV 297

Query: 383 IISNEKLQIKLQDF 396
            +++   ++   DF
Sbjct: 298 KVADPDQRLTDDDF 311


>gi|315083446|gb|EFT55422.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL027PA2]
          Length = 331

 Score =  166 bits (419), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 103/314 (32%), Positives = 163/314 (51%), Gaps = 13/314 (4%)

Query: 93  MMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNR 152
           M   + + E +E IK   S ++    G+  A ++NN  W      +DLLR++G  FSVNR
Sbjct: 1   MNDREVVAEWVESIKDQVSKYVDT-DGRNAAQIVNNYDWTVKYTALDLLRDVGKHFSVNR 59

Query: 153 MLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL 212
           ML+ + V  RL  E  +S+ EF+Y++LQ+ DF EL K Y C LQ G  DQWGNI  G + 
Sbjct: 60  MLARDVVARRL--ESGISYTEFSYVLLQSLDFYELHKRYGCTLQTGAQDQWGNITAGAEF 117

Query: 213 GERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSF 272
             +     +  L +PL+T A GTK GKT SG +W++ E+TS Y F Q++ N +D+ V+ +
Sbjct: 118 IRKTTGDVVHGLVTPLITKADGTKYGKTESGTVWVDPELTSAYAFHQFFLNAEDSKVIEY 177

Query: 273 AKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIATEITTMVHGREEAEKAATAAMECFDM- 329
            K  +     EI+ +A+   +E     A+  +A ++T +VHG E+ + A  AA   F   
Sbjct: 178 LKIFSPRSREEIEDLARKTEEEPWRRAAQHCLADDLTDLVHGVEQRKAAEAAAQAIFGRG 237

Query: 330 SIHSQHMPTISISKDEVS----RGMGLLTLI---VKAGFATSTNEARRHLKSNAIKINNS 382
            +      T+    DE+      G    T++   V AG   + +  RR +      +NN 
Sbjct: 238 ELRDLDERTVLSLSDELGAAHYEGGEYPTVVGAMVAAGVVDTKSAGRRAVAEGGAYLNNV 297

Query: 383 IISNEKLQIKLQDF 396
            +++   ++   DF
Sbjct: 298 KVADPDQRLTDDDF 311


>gi|145611092|ref|XP_368579.2| hypothetical protein MGG_00665 [Magnaporthe oryzae 70-15]
 gi|145018420|gb|EDK02699.1| hypothetical protein MGG_00665 [Magnaporthe oryzae 70-15]
          Length = 653

 Score =  166 bits (419), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 107/337 (31%), Positives = 176/337 (52%), Gaps = 32/337 (9%)

Query: 11  ILSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
           +  ERG +  ++  RE +  L     + AY+G D TA+SLH GHL  LM LFW+   G+ 
Sbjct: 93  VFEERGLVKDVAGSREAIRELMRLKRIGAYVGIDPTAASLHLGHLVPLMPLFWMYMNGYT 152

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI----EKIKGIFSSF----IKYGTGKT 121
            I+L+G  T+ +GDPS R   R     +   +N+     ++K I+++      +YG  + 
Sbjct: 153 SITLLGSATAKVGDPSGRLTDREKQHREVFNKNMVSMHYQLKKIWTNVDAMARRYGYQEE 212

Query: 122 DAL---MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMI 178
            A      NN  W      ++ L+ +GS   V  MLS ++V+ +L     LSF E  Y +
Sbjct: 213 WAWSRGQRNNNEWWNKQPLLEFLQLLGSNVRVGPMLSRDTVKRKLTEGDGLSFAELTYTL 272

Query: 179 LQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL-----------GERLKTP--KLFALT 225
           +Q +D+  L K    ++Q+GGSDQ+GNI+ GI++           G   ++P  ++   T
Sbjct: 273 MQGWDWWTLYKQLGVQMQIGGSDQFGNIVQGIEVVKTVRPQQPIPGVNPESPLEEIIGFT 332

Query: 226 SPLLTTASGTKMGKTLSGA-IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI 284
           +PLLT +SG K+GK+  G  +WL+   TSPY+ + Y+    D D+    K  T +P  +I
Sbjct: 333 TPLLTNSSGEKIGKSSGGGNLWLSNIKTSPYDLYGYFVRQPDEDMERLLKLFTFIPTKKI 392

Query: 285 DRMAKLQGKEINEAKKI----IATEITTMVHGREEAE 317
             +  +   E ++ K++    +A E+  +VHG + AE
Sbjct: 393 SEI--IAEHETDKPKRVAQHRLAFEVIALVHGMDVAE 427


>gi|315106695|gb|EFT78671.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL030PA1]
          Length = 331

 Score =  165 bits (418), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 103/314 (32%), Positives = 163/314 (51%), Gaps = 13/314 (4%)

Query: 93  MMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNR 152
           M   + + E +E IK   S ++    G+  A ++NN  W      +DLLR++G  FSVNR
Sbjct: 1   MNDREVVAEWVESIKDQVSKYVDT-DGRNAAQIVNNYDWTVKYTALDLLRDVGKHFSVNR 59

Query: 153 MLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL 212
           ML+ + V  RL  E  +S+ EF+Y++LQ+ DF EL K Y C LQ G  DQWGNI  G + 
Sbjct: 60  MLARDVVARRL--ESGISYTEFSYVLLQSLDFYELHKRYGCTLQTGAQDQWGNITAGAEF 117

Query: 213 GERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSF 272
             +     +  L +PL+T A GTK GKT SG +W++ E+TS Y F Q++ N +D+ V+ +
Sbjct: 118 IRKTTGDVVHGLVTPLITKADGTKYGKTESGTVWVDPELTSAYAFHQFFLNAEDSKVIEY 177

Query: 273 AKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIATEITTMVHGREEAEKAATAAMECFDM- 329
            K  +     EI+ +A+   +E     A+  +A ++T +VHG E+ + A  AA   F   
Sbjct: 178 LKIFSPRSREEIEDLARKTEEEPWRRAAQHCLADDLTDLVHGVEQRKAAEAAAQAIFGRG 237

Query: 330 SIHSQHMPTISISKDEVS----RGMGLLTLI---VKAGFATSTNEARRHLKSNAIKINNS 382
            +      T+    DE+      G    T++   V AG   + +  RR +      +NN 
Sbjct: 238 ELRDLDERTVLSLSDELGAAHHEGGEYPTVVGAMVAAGVVDTKSGGRRAVAEGGAYLNNV 297

Query: 383 IISNEKLQIKLQDF 396
            +++   ++   DF
Sbjct: 298 KVADPDQRLTDDDF 311


>gi|171695206|ref|XP_001912527.1| hypothetical protein [Podospora anserina S mat+]
 gi|170947845|emb|CAP60009.1| unnamed protein product [Podospora anserina S mat+]
          Length = 641

 Score =  165 bits (417), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 104/342 (30%), Positives = 174/342 (50%), Gaps = 36/342 (10%)

Query: 11  ILSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
           +  ERG++   +   E +  L     + AY G D TA SLH GHL  LM +FW+   G+ 
Sbjct: 71  MFVERGYVKDTAGSHETIRKLMLHKRIGAYTGIDPTAPSLHIGHLLPLMPIFWMYMHGYA 130

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIK--------GIFSSFIKYGTGKT 121
             +L+GG T+ IGDP+ R  SR  ++  ++  N+ KI          +     + G  K 
Sbjct: 131 GYTLIGGATAKIGDPTDRLVSRTPLKRTDLTMNLTKIHYQLKALWMNVEEQARRRGFEKD 190

Query: 122 DAL---MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMI 178
            A    ++NN TW  S+  I++L+ +G    +  +LS ++V++++ +   +SF EF Y +
Sbjct: 191 WAWKRAVVNNSTWWNSLPLIEVLKRLGDSMRMGPLLSRDTVKNKMSKGDGMSFSEFTYPL 250

Query: 179 LQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL----------------GERLKTPKLF 222
           +Q +D+  + +    ++Q+GGSDQ+GNI+ G++                 G     P  F
Sbjct: 251 MQGWDWWHMYQANGIQMQIGGSDQYGNIVTGVETVKVVRDNEPDPAKKIEGGPFNDPVGF 310

Query: 223 ALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMS 282
             T PLLT ++G K GK+   A+WL+K  TS ++ + Y+    D +V    K  T LPM 
Sbjct: 311 --TVPLLTDSAGVKFGKSAGNAVWLDKFQTSEFDLYGYFVRRSDQEVEKLLKLFTFLPME 368

Query: 283 EIDRMAKLQGKEINEAKKI----IATEITTMVHGREEAEKAA 320
            I+   K+  +  N A+++    +A E+  +VHG   A + A
Sbjct: 369 NINEAMKIHSE--NPARRVAQHLLAFEVVGLVHGMNAAHRTA 408


>gi|313826058|gb|EFS63772.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL063PA1]
          Length = 331

 Score =  164 bits (415), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 102/314 (32%), Positives = 163/314 (51%), Gaps = 13/314 (4%)

Query: 93  MMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNR 152
           M   + + E +E IK   S ++    G+  A ++NN  W      +DLLR++G  FSVNR
Sbjct: 1   MNDREVVAEWVESIKDQVSKYVDT-DGRNAAQIVNNYDWTVKYTALDLLRDVGKHFSVNR 59

Query: 153 MLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL 212
           ML+ + V  RL  E  +S+ EF+Y++LQ+ DF EL K Y C LQ G  DQWGNI  G + 
Sbjct: 60  MLARDVVARRL--ESGISYTEFSYVLLQSLDFYELHKRYGCTLQTGAQDQWGNITAGAEF 117

Query: 213 GERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSF 272
             +     +  L +PL+T A GTK GKT SG +W++ E+TS Y F Q++ N +D+ V+ +
Sbjct: 118 IRKTTGDVVHGLVTPLITKADGTKYGKTESGTVWVDPELTSAYAFHQFFLNAEDSKVIEY 177

Query: 273 AKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIATEITTMVHGREEAEKAATAAMECFDM- 329
            K  +     +I+ +A+   +E     A+  +A ++T +VHG E+ + A  AA   F   
Sbjct: 178 LKIFSPRSREKIEDLARKTEEEPWRRAAQHCLADDLTDLVHGVEQRKAAEAAAQAIFGRG 237

Query: 330 SIHSQHMPTISISKDEVS----RGMGLLTLI---VKAGFATSTNEARRHLKSNAIKINNS 382
            +      T+    DE+      G    T++   V AG   + +  RR +      +NN 
Sbjct: 238 ELRDLDERTVLSLSDELGAAHHEGGEYPTVVGAMVAAGVVDTKSAGRRAVAEGGAYLNNV 297

Query: 383 IISNEKLQIKLQDF 396
            +++   ++   DF
Sbjct: 298 KVADPDQRLTDDDF 311


>gi|156835905|ref|XP_001642206.1| hypothetical protein Kpol_1074p1 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156112662|gb|EDO14348.1| hypothetical protein Kpol_1074p1 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 351

 Score =  163 bits (413), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 94/296 (31%), Positives = 156/296 (52%), Gaps = 29/296 (9%)

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           ++NN +W   +K +D L   G    +  ML+ +S+ +R+     L F EF Y +LQAYDF
Sbjct: 44  VVNNHSWWKDVKMLDFLGNYGRHIRIQNMLARDSISARIGTSDGLGFNEFTYQVLQAYDF 103

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERL-----KTPKLFALTSPLLTTASGTKMGK 239
             L KN    +Q+GG DQWGNI  GID   R+     K+P  +A+TS LLTTA+G K GK
Sbjct: 104 YHLYKNEGVSIQVGGGDQWGNITAGIDFISRVEPNSKKSPP-YAITSSLLTTANGDKFGK 162

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE--INE 297
           +   AI++N+++ SPY+ +QY+ N++DAD+  F K  T L + +I+ + K+  K+  + E
Sbjct: 163 SAGNAIFINRDINSPYDIFQYFLNVEDADIEKFLKIFTLLSLEDINSIMKMHNKDPKLRE 222

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISI--------SKDEVSRG 349
            +K +A E+T ++HG E    A   +   F+  +    +   S+        + + V   
Sbjct: 223 GQKTLAREVTELIHGYENCRFAEILSDMLFNDKLKDSSVSVDSLLDAAYVAGNYETVPTR 282

Query: 350 MGLLTLIVKAGFATSTNEARR-------------HLKSNAIKINNSIISNEKLQIK 392
             L+ +I K    +++   RR              +   ++ IN+ I+ NE L ++
Sbjct: 283 SSLVEIISKVTNCSNSEAKRRISQGGVYLGLDRIQVTDPSVSINDYILQNEVLILR 338


>gi|224095535|ref|XP_002197393.1| PREDICTED: similar to tyrosyl-tRNA synthetase 2, mitochondrial
           [Taeniopygia guttata]
          Length = 442

 Score =  163 bits (413), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 107/329 (32%), Positives = 169/329 (51%), Gaps = 17/329 (5%)

Query: 100 QENI-EKIKGIFSSFIKYGTGKTD-ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFE 157
           Q+NI EK+K     F + G G+   A +L+N  WL     +  L   G    +  +LS +
Sbjct: 110 QDNIVEKLKRKL--FWEPGAGRLGRATLLDNARWLGREPLLRFLGGAGGRLRMGTLLSRQ 167

Query: 158 SVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK 217
           S ++RL   + +S  EF Y  LQAYDF+ L +++ CR+Q+GG DQ GNI+ G +L  ++ 
Sbjct: 168 SCQARLHSAEGMSLAEFLYPALQAYDFLHLHRHHGCRIQLGGHDQMGNIMSGYELVTKMT 227

Query: 218 TPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT 277
              +F +T PL+T+ SG K+GKT   A+WLN++ TSP+  +Q++    D  V  + K  T
Sbjct: 228 GADVFGITVPLITSTSGDKLGKTAGNAVWLNRDKTSPFELYQFFVRQQDNIVEKYLKLFT 287

Query: 278 TLPMSEIDRMAKLQGKEINE--AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS-- 333
            LP++EI  + ++  KE  +   +K +A E+T +VHGRE  E A       +  S+ +  
Sbjct: 288 FLPLAEIAHIMEMHAKEPEKWGPQKRLAAEVTKLVHGREGLESAKRCTKALYYSSVEALE 347

Query: 334 -------QHMPTISISKD-EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIIS 385
                  Q +   + S +  +  GM +L L  KA          R +    + IN + ++
Sbjct: 348 EMSDQELQELFRQATSAELMLEPGMTVLDLCRKANAIPDGPSGYRKITDGGVSINGNRVT 407

Query: 386 N-EKLQIKLQDFDSTGNIKLSFGKKNHII 413
           N E + I  Q     G   L  GKKN+ I
Sbjct: 408 NPETVLILGQHILKNGVSLLRVGKKNYYI 436



 Score = 53.9 bits (128), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 23/60 (38%), Positives = 37/60 (61%)

Query: 221 LFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLP 280
           +F +T PL+T+ SG K+GKT   A+WLN++ TSP+  +Q++    D  V    ++L   P
Sbjct: 66  VFGITVPLITSTSGDKLGKTAGNAVWLNRDKTSPFELYQFFVRQQDNIVEKLKRKLFWEP 125


>gi|296811028|ref|XP_002845852.1| tyrosyl-tRNA synthetase [Arthroderma otae CBS 113480]
 gi|238843240|gb|EEQ32902.1| tyrosyl-tRNA synthetase [Arthroderma otae CBS 113480]
          Length = 550

 Score =  162 bits (411), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 113/341 (33%), Positives = 170/341 (49%), Gaps = 56/341 (16%)

Query: 5   KSDFLSILSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           +  FLS + ERG +H +   R+ LD + +   V  Y G D TA S+H GH+   M+L W 
Sbjct: 20  RQSFLSFMEERGLVHSVIGDRDVLDKMITNKRVGLYAGIDPTAPSMHVGHMLPFMVLGWA 79

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
              G K + L+GG TS +GDP+ R  +R +                              
Sbjct: 80  YVHGMKSVWLLGGSTSRVGDPTGRTTARPL------------------------------ 109

Query: 124 LMLNNETWLCSIKYIDL-LREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
             L+N +    I  + + L+++G       ML  E V++RL+    +SF EF Y I+QA+
Sbjct: 110 --LSNASRKAYIANMHMQLKKLG-----GTMLGREPVKTRLESGSGMSFTEFCYPIMQAW 162

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGID-LGERLKT----------PKL---FALTSPL 228
           D+  L +     +Q+GGSDQ GNI  GID + + LKT          P L     LT PL
Sbjct: 163 DWWHLYQK-GITIQVGGSDQSGNIQFGIDTIKQILKTSPIERKPGEDPDLSTPIGLTVPL 221

Query: 229 LTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA 288
           LTT++G K+GK+   +IWL+K+MTS Y+ +QY+    D D+    K  T +P S I  + 
Sbjct: 222 LTTSTGEKIGKSAGNSIWLDKDMTSTYDLYQYFMRQPDQDMERLLKLFTFIPTSRIHEIV 281

Query: 289 KLQGK--EINEAKKIIATEITTMVHGREEAEKAATAAMECF 327
           +   K   +  A+  +A E   ++HG +EAE+A+ A    F
Sbjct: 282 EEHNKSPSLRLAQHTLAQEFVELIHGAKEAEEASKAHKAIF 322


>gi|226291534|gb|EEH46962.1| tyrosyl-tRNA synthetase [Paracoccidioides brasiliensis Pb18]
          Length = 612

 Score =  160 bits (406), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 104/363 (28%), Positives = 180/363 (49%), Gaps = 48/363 (13%)

Query: 5   KSDFLSILSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           +  FL ++ ERG ++Q+   R+ L+ + ++  V  Y+G D TA SLH GH+   M+L W 
Sbjct: 82  RKSFLELMEERGLVNQVVGDRDALNKMWTERRVGVYVGVDPTAPSLHIGHMLPFMVLAWA 141

Query: 64  QKTGHKPISL----------------MGGGTSIIGDPSFRDESR----RMMRSQEIQENI 103
              G + + L                +GG TS IGDP+ R+  R    R+ R + +    
Sbjct: 142 YVHGIRSVFLVSTCCFYALPRYILVQLGGSTSQIGDPTDREAPRAKQARITRKENMVNMH 201

Query: 104 EKIKGIFSSFIKYGTGKTDAL-------MLNNETWLCSIKYIDLLREIGSFFSVNRMLSF 156
            +++    S  +YG     A        ++NN  W     ++++++ +G    +  ML  
Sbjct: 202 LQLRIFGMSIERYGAKHGYAYEPIWRRAIVNNNAWWLKAPFMEVMKTMGESVRLGPMLGR 261

Query: 157 ESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE-- 214
           ++V++RL+  + +S  EF Y +LQA+D+ +L +  +  +Q+GGSDQ GNI  GID  +  
Sbjct: 262 DTVKNRLQSGKGMSLAEFTYPLLQAWDWWQLIQQQNILVQVGGSDQAGNIQFGIDATKAL 321

Query: 215 --------RLKTP--------KLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFW 258
                   R   P        +    T+PLLTT SG K GKT   A+WL+K+MT  ++ +
Sbjct: 322 MKADQDYWRKHAPNPEDREILEPMGFTTPLLTTPSGEKFGKTAGNAVWLDKDMTPTFDLY 381

Query: 259 QYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKKIIATEITTMVHGREEA 316
           Q++  + D +V  + K  T L +  I ++    ++      A+  +A+E   ++ G  EA
Sbjct: 382 QFFIRVPDENVEQYLKYFTFLSIPTIKKIMVQHMEDPSKRVAQHKLASEFVELMRGPAEA 441

Query: 317 EKA 319
            +A
Sbjct: 442 AQA 444


>gi|25145802|ref|NP_741382.1| tYrosinyl tRNA Synthetase family member (yrs-1) [Caenorhabditis
           elegans]
 gi|15789312|gb|AAB09162.2| C. elegans YARS-1 protein, isoform a, confirmed by transcript
           evidence [Caenorhabditis elegans]
          Length = 447

 Score =  160 bits (405), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 108/349 (30%), Positives = 181/349 (51%), Gaps = 17/349 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVT----AYIGYDLTASSLHAGHLTQLMLLFW 62
           D+++ L+ R  + Q S P +L   CS+ +       Y G+D TA SLH G+L  L+ L  
Sbjct: 25  DYITDLNARKQL-QHSYPTDLLSKCSEDLRQLPPYVYAGFDPTAESLHIGNLLILVNLIR 83

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD 122
            Q+ G +PI+L+G  T+ IGDPS +   R ++    I  N  K+        +   G ++
Sbjct: 84  AQQFGIRPIALIGEFTASIGDPSGKKSERGLLAGDVIMHNSRKVTDQICKIFENAPGSSE 143

Query: 123 -ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA 181
             +++NN  WL  I   D LRE  +   V +ML   ++++RL  E  LS+ EF+Y  +QA
Sbjct: 144 KPIIVNNNDWLGKISLRDFLRECKN-MQVGKMLRMNTIKNRL--EVGLSYTEFSYQTMQA 200

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFA-LTSPLLTTASGTKMGKT 240
           +D+  L++ Y CR Q+GG DQ G++  G    +++      A +  P+LT ++G K+GK+
Sbjct: 201 FDWYTLSEKYGCRFQLGGYDQLGHLDFGAHYIKKMMNQAFAAGVCFPILTDSTGAKLGKS 260

Query: 241 L-SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE-- 297
              GA+WL+   TSP++F+Q++  + D          +   +  I  + K     + +  
Sbjct: 261 EGGGALWLDATKTSPFHFYQFFAQLHDDKAEELLLLFSLQDIEHIRDVLKNHRSNLGQWI 320

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV 346
           A++ +A EIT +VHG+E  E     AM C      ++      +S+ EV
Sbjct: 321 AQRELAAEITRIVHGKEGLE----VAMRCTKAMFGAKKADLSGLSRSEV 365


>gi|218458672|ref|ZP_03498763.1| tyrosyl-tRNA synthetase [Rhizobium etli Kim 5]
          Length = 163

 Score =  159 bits (403), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 74/160 (46%), Positives = 109/160 (68%)

Query: 256 NFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREE 315
           +FWQY RN +DADV  F +  TTLPM EI R++ + G E+NE KKI+ATE+T ++HGR  
Sbjct: 1   DFWQYGRNTEDADVPRFLQLFTTLPMDEIARLSAIGGSELNEVKKILATEVTAILHGRPA 60

Query: 316 AEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSN 375
           AE+AA  A + F+    S+++P++ I   E+  G+GLL+L+V+AG A S  EARRH++  
Sbjct: 61  AEQAAETARKTFEEGGLSENLPSVEIPAIELDGGIGLLSLMVRAGLAGSNGEARRHVQGG 120

Query: 376 AIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           A++IN+  +S+E+  I   +  + G IKLS GKK HI+  
Sbjct: 121 AVRINDEAVSDERRLIGSDEITADGVIKLSLGKKKHILIR 160


>gi|258597269|ref|XP_001347852.2| tyrosine-tRNA ligase, putative [Plasmodium falciparum 3D7]
 gi|254832636|gb|AAN35765.2| tyrosine-tRNA ligase, putative [Plasmodium falciparum 3D7]
          Length = 561

 Score =  159 bits (403), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 123/495 (24%), Positives = 208/495 (42%), Gaps = 106/495 (21%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILC--------SQGVVTAYIGYDLTASSLHAGHLTQ 56
           KS  L  L ER  IH +S+ R +D +          +   + Y G DLT   LH G+L  
Sbjct: 46  KSKALKKLYERKLIHYVSDIRNIDKILYHNENEKEKKNRKSVYAGIDLTCKYLHLGNLVP 105

Query: 57  LMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIF------ 110
           L+ L  L+      I L+G  T+ IGDPSF+   R+    ++I EN E I+         
Sbjct: 106 LITLDILRNHNTDVIILLGNSTTQIGDPSFQKVERQKTLEKDILENEENIRRTIIELFLQ 165

Query: 111 --------------------SSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSV 150
                                 FI     K   ++L N  W   +  ID L+  G +FS+
Sbjct: 166 REICEEDMNELIKKSNIERDKEFIYESDNKGSLIILKNSLWYDKMNIIDFLK-YGEYFSI 224

Query: 151 NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGI 210
           N++L  E   +++K+  +L+  + NY+ LQ++DF+ L   +   +Q+GGSDQWGNI  GI
Sbjct: 225 NKLLRKECFLNKIKK--NLTLKDLNYITLQSFDFLHLFNKFKTCIQIGGSDQWGNIQSGI 282

Query: 211 DLGERLKTPKLFALTSPLLTTASGTKMGKTLSG-----AIWLNKEMTSPYNFWQYWRNID 265
           +L + +   +L+ LT+ LL   +  K  K+         IW++K   SPY FW + RN++
Sbjct: 283 ELAQYISNTQLYGLTTNLLVYKNNIKYSKSQFNENKRLPIWIDKNYNSPYLFWNFLRNVE 342

Query: 266 DADVVSFAKRLTTLPMS---EIDRMAKLQGKEINE------------------------- 297
           D  V S+   LT L ++   EI+ +       +NE                         
Sbjct: 343 DQKVQSYIDMLTNLKININQEIETVYNPMDTNLNEILDETLDDSNKKKKNNDNNNNNNNV 402

Query: 298 ----------------------------AKKIIATEITTMVHGREEAEKAATAAMECFDM 329
                                       AKK ++  +T+ + G    +K         + 
Sbjct: 403 KDINITTEHNNYSNDISLEKSYEEKINQAKKQLSDSVTSYIFGEHTVKKIHKMKDVLKNN 462

Query: 330 SIHS-------QHMPTISISKDEVSRG-MGLLTLIVKAGFATSTNEARRHLKSNAIKINN 381
             H        +  P + I+ + +++  + +  L+ K   A++  EA+  +  N I +N 
Sbjct: 463 EFHKINNIDDIKVFPYVEITMEHINKKQINISDLLKKFDIASTNKEAKEKISQNCIYLNE 522

Query: 382 SIISNEKLQIKLQDF 396
            +I++ K  + + +F
Sbjct: 523 LLINDSKYSLNINNF 537


>gi|149235983|ref|XP_001523869.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
           YB-4239]
 gi|146452245|gb|EDK46501.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
           YB-4239]
          Length = 417

 Score =  158 bits (399), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 127/428 (29%), Positives = 222/428 (51%), Gaps = 51/428 (11%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L  +G I  +++    D +  +  +  Y+G D TASSLH G+L     +F    
Sbjct: 18  SNGVQTLMRKGLIEAVTS----DDVLKEKNLHVYVGCDPTASSLHVGNL----FVFLAAT 69

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN----IEKIKGIFSSFIKY----G 117
             ++   L+GGGT ++GDPS +  +R ++    ++ N     E+++ ++S+F K+    G
Sbjct: 70  YFNQITVLVGGGTGLVGDPSGKTSARVLIDKDILRANEVKITEQLQKLYSNFEKFQDIHG 129

Query: 118 TGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYM 177
             K    ++NN +WL  +  +D LR +G    VN ML+ +SV++R      + F EF Y 
Sbjct: 130 GNKPLIQIVNNYSWLKDVTLLDFLRNVGPKVRVNEMLARDSVKNR----DGVHFGEFAYQ 185

Query: 178 ILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK-LFALTSPLLTTASGTK 236
           +LQ+YDF+ L+ N     Q+GG+DQWGNI  G+D+ ++  +    + +T PLLTT SG K
Sbjct: 186 LLQSYDFLHLSTN-GVNAQLGGADQWGNITAGLDMIKKFGSKNNCYGVTVPLLTTPSGEK 244

Query: 237 MGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT----LPMSEIDRMAKLQG 292
            GK+   A++L+K+MT+P+  +Q++ N  D  V  F   L      +P SE         
Sbjct: 245 FGKSAGNAVFLDKDMTAPFQLYQFFINTPDNIVQRFFTLLNVAKEKIPESE--------- 295

Query: 293 KEINEAKKIIATEITTMVHGREEAE--KAATAAMECF--DMSIHSQHMPTISI--SKDEV 346
               E++K++A  +T ++HG + A+   AA   +  F  ++SI+      I I  +K+E 
Sbjct: 296 ---TESQKLLAKYMTWIIHGEDVADACDAAYKLLNGFPANVSINDFDKAGILIRCNKEE- 351

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
                +L+ I+         E  R + +  + +N   IS ++L +   +F   G + +  
Sbjct: 352 -----MLSAIIARNSDMLRREVNRTIAAKGVTVNGERISKDELILPQHEFVVDGKVIVRV 406

Query: 407 GK-KNHII 413
           GK K H++
Sbjct: 407 GKSKFHVL 414


>gi|270490521|ref|ZP_06207595.1| tRNA synthetase class I (W and Y) [Yersinia pestis KIM D27]
 gi|270339025|gb|EFA49802.1| tRNA synthetase class I (W and Y) [Yersinia pestis KIM D27]
          Length = 210

 Score =  157 bits (397), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 76/185 (41%), Positives = 114/185 (61%), Gaps = 1/185 (0%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG ++ Y G+D TA SLH GHL  L+ L   Q 
Sbjct: 4   SNLIKQLQERGLVAQVTDEDALAERLAQGPISLYCGFDPTADSLHLGHLVPLLCLKRFQL 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+P++L+GG T +IGDPSF+   R++     + E +EKI+   S F+ +  G+  A+ 
Sbjct: 64  AGHRPVALVGGATGMIGDPSFKASERKLNTEDTVNEWVEKIRHQVSPFLDFDCGENSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQS-LSFLEFNYMILQAYDF 184
            NN  W   +  +  LR+IG  FSVN+M++ E+V+ RL R+ S +SF EF+Y +LQAYDF
Sbjct: 124 ANNYDWFGGMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDSGISFTEFSYNLLQAYDF 183

Query: 185 VELAK 189
             L K
Sbjct: 184 ACLNK 188


>gi|156186010|gb|ABU55323.1| tyrosyl-tRNA synthetase [Callosobruchus chinensis]
          Length = 126

 Score =  157 bits (396), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 71/125 (56%), Positives = 97/125 (77%)

Query: 77  GTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIK 136
           GT+ IGDPSF+D++R ++  + I +N   I+ I    + +   KT A+++NN  WL +IK
Sbjct: 1   GTTKIGDPSFKDKARSILPVENINQNTSSIRRILEKMMSFNDSKTGAMIVNNADWLDNIK 60

Query: 137 YIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQ 196
           YID L +IG++FSVNRMLSF+SV++RL REQ+LSFLEFNYM+LQAYDFVEL K + CRLQ
Sbjct: 61  YIDFLGDIGAYFSVNRMLSFDSVKTRLDREQTLSFLEFNYMLLQAYDFVELNKKHGCRLQ 120

Query: 197 MGGSD 201
           +GGS+
Sbjct: 121 IGGSN 125


>gi|135195|sp|P28669|SYYM_PODAN RecName: Full=Tyrosyl-tRNA synthetase, mitochondrial; AltName:
           Full=Tyrosine--tRNA ligase; Short=TyrRS; Flags:
           Precursor
 gi|3109|emb|CAA38725.1| mitochondrial tyrosyl t-RNA synthetase [Podospora anserina]
          Length = 640

 Score =  155 bits (393), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 103/342 (30%), Positives = 174/342 (50%), Gaps = 37/342 (10%)

Query: 11  ILSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
           +  ERG++   +   E +  L     + AY G D TA SLH GHL  LM +FW+   G+ 
Sbjct: 71  MFVERGYVKDTAGSHETIRKLMLHKRIGAYTGIDPTAPSLHIGHLLPLMPIFWMYMHGYA 130

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIK--------GIFSSFIKYGTGKT 121
             +L+GG T+ IGDP+ R  SR  ++  ++  N+ KI          +     + G  K 
Sbjct: 131 GYTLIGGATAKIGDPTDRLVSRTPLKRTDLTMNLTKIHYQLKALWMNVEEQARRRGFEKD 190

Query: 122 DAL---MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMI 178
            A    ++NN TW  S+  I++L+ +G    +  +LS ++V++++ +   +SF EF Y +
Sbjct: 191 WAWKRAVVNNSTWWNSLPLIEVLKRLGDSMRMGPLLSRDTVKNKMSKGDGMSFSEFTYPL 250

Query: 179 LQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL----------------GERLKTPKLF 222
           +Q +D+  + +    ++Q+GGSDQ+GNI+ G++                 G     P  F
Sbjct: 251 MQGWDWWHMYQANGIQMQIGGSDQYGNIVTGVETVKVVRDNEPDPAKKIEGGPFNDPVGF 310

Query: 223 ALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMS 282
             T PLLT ++G K GK+ +G  +L+K  TS ++ + Y+    D +V    K  T LPM 
Sbjct: 311 --TVPLLTDSAGVKFGKS-AGNAFLDKFQTSEFDLYGYFVRRSDQEVEKLLKLFTFLPME 367

Query: 283 EIDRMAKLQGKEINEAKKI----IATEITTMVHGREEAEKAA 320
            I+   K+  +  N A+++    +A E+  +VHG   A + A
Sbjct: 368 NINEAMKIHSE--NPARRVAQHLLAFEVVGLVHGMNAAHRTA 407


>gi|94502430|ref|ZP_01308871.1| tyrosyl-tRNA synthetase [Candidatus Sulcia muelleri str. Hc
           (Homalodisca coagulata)]
 gi|94451013|gb|EAT13997.1| tyrosyl-tRNA synthetase [Candidatus Sulcia muelleri str. Hc
           (Homalodisca coagulata)]
          Length = 256

 Score =  155 bits (393), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 78/195 (40%), Positives = 117/195 (60%), Gaps = 3/195 (1%)

Query: 137 YIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQ 196
           +I+  R+IG +F++N ML+ +S++ R+    S+SF EF Y +LQAYDF+ L K  +C LQ
Sbjct: 7   FIEFARDIGKYFTINYMLTKDSIKRRISNNNSISFTEFTYQLLQAYDFIYLYKEKNCSLQ 66

Query: 197 MGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA-IWLNKEMTSPY 255
           +GGSDQWGNI  GI+L  +    K+  LT PL+T   G+K GKT +G  IW++  +TSPY
Sbjct: 67  IGGSDQWGNITSGIELIRKKLGVKVNGLTFPLITKLDGSKFGKTENGENIWIDPNLTSPY 126

Query: 256 NFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE--INEAKKIIATEITTMVHGR 313
            F+Q+W NI D     + K  T L   EI  +      +  +   +K +A+EIT  +HG+
Sbjct: 127 EFYQFWINISDEQAKKYIKIYTFLKKEEIKEIIFYHENDPKLKLIQKKLASEITIFIHGK 186

Query: 314 EEAEKAATAAMECFD 328
           +  EK    +   F+
Sbjct: 187 KTFEKIKFISNILFN 201


>gi|157364571|ref|YP_001471338.1| tyrosyl-tRNA synthetase [Thermotoga lettingae TMO]
 gi|157315175|gb|ABV34274.1| tyrosyl-tRNA synthetase [Thermotoga lettingae TMO]
          Length = 397

 Score =  153 bits (387), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 109/387 (28%), Positives = 189/387 (48%), Gaps = 29/387 (7%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
            K + + ++SE   +++++  ++L +          +G D T   LH GH   L  L   
Sbjct: 10  LKKNAVDLVSEEDLLNKLTRKKQLRV---------KLGVDPTRPDLHLGHAVVLFKLRQF 60

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q  GHK I ++G  T+ IGDPS RD +R+M+   E+++N +  +    +F      KT+ 
Sbjct: 61  QDLGHKVILIIGDFTAQIGDPSGRDVTRQMLSESEVRQNAKTYQE--QAFRILDKEKTEV 118

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
               N  WL  + + D+++ + S ++V RML  +    R      +S  EF Y + QAYD
Sbjct: 119 RF--NSEWLSKMSFADVIK-LASKYTVARMLERDDFSKRYSSNLPISISEFLYPLAQAYD 175

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLS 242
            V +  +    +++GG+DQ+ N++ G  + E +       LT P++    G  KM K+  
Sbjct: 176 SVAVQAD----VELGGTDQYFNLLVGRKIQEEMGQEPQVVLTMPIIEGTDGKMKMSKSYE 231

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL-QGKEIN--EAK 299
             I  N    +P++ +    +I D  ++ + + LT +P  +I+    L Q K +N  + K
Sbjct: 232 NYIAFN---DTPFDMYGKLMSIPDELIIKYIRLLTQIPEQKINEYESLIQSKSVNPRDIK 288

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKA 359
             +A  IT+  HG E A KA    ++ F        MP I +   EV     L+ L+V  
Sbjct: 289 MKLAFAITSFFHGEEGAAKAENEFIKIFRQKELPTQMPAIELDNSEVE----LVELLVTL 344

Query: 360 GFATSTNEARRHLKSNAIKINNSIISN 386
             A+S +EARR +   A+KI++  I++
Sbjct: 345 QIASSRSEARRLISQGAVKIDDEKITD 371


>gi|331241372|ref|XP_003333334.1| hypothetical protein PGTG_15118 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
 gi|309312324|gb|EFP88915.1| hypothetical protein PGTG_15118 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
          Length = 357

 Score =  152 bits (385), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 94/303 (31%), Positives = 152/303 (50%), Gaps = 43/303 (14%)

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W+  +  ++ L  +G    V+ ML+ +SV+ RL+    +SF EF Y +LQAYDF +
Sbjct: 22  NNLEWMKDLSLLEFLGSVGRVARVSAMLARDSVKQRLESGSGISFTEFTYQLLQAYDFAQ 81

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKT----------------PKL-------FA 223
           L   Y C +Q+GGSDQ+GNI+ GI+L  +L++                P+        F 
Sbjct: 82  LRSRYRCTIQLGGSDQYGNIMSGIELMSKLQSSPASDPVAQTRSRESDPETTSNRNVAFG 141

Query: 224 LTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSE 283
           LT PLLTT  G K GK+   A+WL+ ++TSP  F+Q + +I D++V+ + K LT +P  E
Sbjct: 142 LTIPLLTTREGEKFGKSAGNAVWLDPKLTSPVEFYQTFISIPDSEVLKYLKMLTFVPTEE 201

Query: 284 IDRMAKLQGKEIN---EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS 340
           +D+  +   K  +   E +K++A E+T +VHG +   +A       F      +      
Sbjct: 202 LDQCLQSSTKNPDSKRELQKLLAREVTLLVHGEKGLRQAIQGTEFLFPTESKLESDSRDH 261

Query: 341 ISKDEVSR-----------------GMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSI 383
            SK+++                   G  L  L V +    S  EARR +K+  ++ N+  
Sbjct: 262 WSKEKLDETFENSPNWIELKSFEVIGRSLGDLSVTSKLFQSKGEARRAIKAGGVRFNHRQ 321

Query: 384 ISN 386
           I++
Sbjct: 322 ITD 324


>gi|316970901|gb|EFV54757.1| NEDD8-activating enzyme E1 catalytic subunit [Trichinella spiralis]
          Length = 819

 Score =  152 bits (384), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 104/376 (27%), Positives = 174/376 (46%), Gaps = 50/376 (13%)

Query: 39  YIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQE 98
           Y G+D +  SLH G+L                       TS +GDPS R   R  +   E
Sbjct: 59  YAGFDPSGDSLHIGNL----------------------ATSRLGDPSGRSVERDRLSLDE 96

Query: 99  IQENIEKI----KGIFSSF--IKYGTGKTDAL----MLNNETWLCSIKYIDLLREIGSFF 148
           IQ N + I    K I  +F  IK     T+ L    +L+N  W   +  +D    +G  F
Sbjct: 97  IQSNSQCIEFTLKSILRNFEKIKISLNSTNVLSTPAVLDNTDWYHQMNVLDFFDAVGRAF 156

Query: 149 SVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIIC 208
            +  M+  + +R R+ RE  +S+ EF+Y  LQAYD++ L + + C LQ+GG+DQ GNI  
Sbjct: 157 RLRHMMDKQCIRERIHRE-GMSYAEFSYQTLQAYDWLHLYEKFGCLLQIGGADQTGNIHS 215

Query: 209 GIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDAD 268
           G DL         + L  PL+ +++G K+GK++  ++WL+   TS + F+QY+  + D +
Sbjct: 216 GHDLIRFFHNQSAYGLLVPLMLSSTGEKIGKSVGSSLWLSSSRTSSFVFYQYFLQLTDEE 275

Query: 269 VVSFAKRLTTLPMSEIDRMA--KLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMEC 326
             S  K  +    ++++R+     Q  E   A++ +A ++T +VH       A       
Sbjct: 276 AKSMMKLFSFCSEADLERILDDHCQQPEKRIAQRFLADQLTLLVHSESGLALAKRITEIL 335

Query: 327 FDMSIH-------------SQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLK 373
           FD  +H              + +P + +S+  +   +  ++L +KAG     N A R + 
Sbjct: 336 FDHRLHGIGDLDENDLNILCREVPGVQLSRQALP--ISAISLALKAGCFDDVNTAERTIN 393

Query: 374 SNAIKINNSIISNEKL 389
                +NN  I+N  +
Sbjct: 394 QGGFHVNNFKITNPTI 409


>gi|156087218|ref|XP_001611016.1| tyrosyl-tRNA synthetase [Babesia bovis T2Bo]
 gi|154798269|gb|EDO07448.1| tyrosyl-tRNA synthetase, putative [Babesia bovis]
          Length = 605

 Score =  151 bits (381), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 117/397 (29%), Positives = 185/397 (46%), Gaps = 88/397 (22%)

Query: 5   KSDFLSILSERGFIHQISNPRELD-ILCSQ------GVVTA-YIGYDLTASSLHAGHLTQ 56
           +S FL  L ERG  H +++   LD  LC        G+V A Y G DLTA  +H G L Q
Sbjct: 87  RSAFLCELIERGLFHSVTDLEGLDEFLCEHELSAESGLVPAVYYGIDLTADFIHEGTLLQ 146

Query: 57  LMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEK----------- 105
           ++LL      G   + ++GGGT++IGDPSF+  +RR   +    +N  K           
Sbjct: 147 ILLLRRFLTKGFNVVVVLGGGTTLIGDPSFK--ARRTKATLNATQNDRKLHNVILNRTAD 204

Query: 106 ---------------IKGIFSSFI--KYG----------------------TGKTDALML 126
                          +K + +  I  K+G                      +   + +++
Sbjct: 205 TVSVNDRNYNTIYRIVKKLLTQKIENKHGDLVEPIFTLACDLNGENIDTVISNPYNVVLV 264

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK----------REQSLSFLEFNY 176
           NN      +   + L  +    SV RMLS +S++SRL+          R+ ++   EF Y
Sbjct: 265 NNRDLYDKLSLTEYLTTVARHMSVGRMLSRDSIKSRLQIADEGSNNSVRQANMDLAEFIY 324

Query: 177 MILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK--TPKLFALTSPLLTTASG 234
           M LQA DF+ ++  ++  +Q+GGSDQ GNI+ GI+LG  L   +  L+ +T+PLL T +G
Sbjct: 325 MSLQATDFIHVSSMFNAVIQVGGSDQMGNIMSGIELGRSLGALSKTLYGITTPLLQTRTG 384

Query: 235 TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE 294
            K+ K+ +  +      T   + W ++RN+DD  V  + K LT +P+   D + K     
Sbjct: 385 EKLSKSNNEDLLRINTDTPALSLWSHFRNVDDKAVRCYLKWLTKVPL---DTIEKTMNNH 441

Query: 295 INEAKK------------IIATEITTMVHGREEAEKA 319
           +N+AK             ++A E+TT + G EE  KA
Sbjct: 442 VNDAKVRLHRCKTKLSQILLANELTTAIFG-EEYTKA 477


>gi|225679779|gb|EEH18063.1| tyrosyl-tRNA synthetase [Paracoccidioides brasiliensis Pb03]
          Length = 1567

 Score =  150 bits (378), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 104/381 (27%), Positives = 180/381 (47%), Gaps = 66/381 (17%)

Query: 5    KSDFLSILSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
            +  FL ++ ERG ++Q+   R+ L+ + ++  V  Y+G D TA SLH GH+   M+L W 
Sbjct: 1019 RKSFLELMEERGLVNQVVGDRDALNKMWTERRVGVYVGVDPTAPSLHIGHMLPFMVLAWA 1078

Query: 64   QKTGHKPISL----------------MGGGTSIIGDPSFRDESR----RMMRSQEIQENI 103
               G + + L                +GG TS IGDP+ R+  R    R+ R + +    
Sbjct: 1079 YVHGIRSVFLVSTCCFYALPHYILVQLGGSTSQIGDPTDREAPRAKQARITRKENMVNMH 1138

Query: 104  EKIKGIFSSFIKYGTGKTDAL-------MLNNETWLCSIKYIDLLREIGSFFSVNRMLSF 156
             +++    S  +YG     A        ++NN  W     ++++++ +G    +  ML  
Sbjct: 1139 LQLRIFGMSIERYGAKHGYAYEPIWRRAIVNNNAWWLKAPFMEVMKTMGESVRLGPMLGR 1198

Query: 157  E------------------SVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMG 198
            +                  SV++RL+  + +S  EF Y +LQA+D+ +L +  +  +Q+G
Sbjct: 1199 DTILLGVFRTRAADTIRLCSVKNRLQSGKGMSLAEFTYPLLQAWDWWQLIQQQNILVQVG 1258

Query: 199  GSDQWGNIICGIDLGE----------RLKTP--------KLFALTSPLLTTASGTKMGKT 240
            GSDQ GNI  G+D  +          R   P        +    T+PLLTT SG K GKT
Sbjct: 1259 GSDQAGNIQFGMDATKALMKADRDYWRKHAPNPEDREILEPMGFTTPLLTTPSGEKFGKT 1318

Query: 241  LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEA 298
               A+WL+K+MT  ++ +Q++  + D +V  + K  T L +  I ++    ++      A
Sbjct: 1319 AGNAVWLDKDMTPTFDLYQFFIRVPDENVEQYLKYFTFLSIPTIKKIMVQHMEDPSKRVA 1378

Query: 299  KKIIATEITTMVHGREEAEKA 319
            +  +A+E   ++ G  EA +A
Sbjct: 1379 QHKLASEFVELMRGPAEAAQA 1399


>gi|317478181|ref|ZP_07937350.1| tRNA synthetase class I [Bacteroides sp. 4_1_36]
 gi|316905664|gb|EFV27449.1| tRNA synthetase class I [Bacteroides sp. 4_1_36]
          Length = 193

 Score =  149 bits (375), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 76/194 (39%), Positives = 117/194 (60%), Gaps = 5/194 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG +H +    E   L ++  VTAYIG+D TA SLH GHL  +M+L   Q+ 
Sbjct: 2   NFVEELRWRGMLHDMMPGTE--ELLAKEQVTAYIGFDPTADSLHIGHLCSVMILRHFQRC 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD-ALM 125
           GHKP++L+GG T +IGDPS +   R ++  + +Q N+  +K   S F+ + +   + A +
Sbjct: 60  GHKPLALIGGATGMIGDPSGKSAERNLLTEETLQRNLAGMKAQLSKFLDFDSDAPNRAEL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQAYD 183
           +NN  W+ +  ++D  RE+G   +VN M++ +SV+ RL  E    LSF EF Y +LQ YD
Sbjct: 120 VNNYDWMKNFTFLDFAREVGKHITVNYMMAKDSVKKRLNGEARDGLSFTEFTYQLLQGYD 179

Query: 184 FVELAKNYDCRLQM 197
           F+ L +   C+LQM
Sbjct: 180 FLHLYETKGCKLQM 193


>gi|71022055|ref|XP_761258.1| hypothetical protein UM05111.1 [Ustilago maydis 521]
 gi|46097752|gb|EAK82985.1| hypothetical protein UM05111.1 [Ustilago maydis 521]
          Length = 543

 Score =  148 bits (373), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 100/327 (30%), Positives = 154/327 (47%), Gaps = 49/327 (14%)

Query: 39  YIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQE 98
           Y G D +A SLH G+L  L+ L    +  H PI L+GG T  IGDPS R   R  +    
Sbjct: 92  YSGVDPSADSLHVGNLLPLLTLAHFARHRHHPIVLVGGATGSIGDPSGRSTERNALSKDV 151

Query: 99  IQENIEKIKGIFSSFIKY-------GTGKTDAL-------------------MLNNETWL 132
           +  N+  I      F  +        TG+  A+                   M+NN  W+
Sbjct: 152 LHRNVAAITQQVGKFFNHVQEYYAESTGERFAVDNHTEDKEREASRLGMGIRMMNNYEWM 211

Query: 133 CSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQS------------LSFLEFNYMILQ 180
             +  +D L  +G    + +ML+ +SV SRL    S            +S+ EF+Y +LQ
Sbjct: 212 KDVSLLDFLGGVGRHARLTQMLARDSVASRLAPATSTGSSSAANGGGGMSYTEFSYQLLQ 271

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLL-------TTAS 233
           AYDF  L  ++ C +Q+GGSDQ GNI  GIDL  R  +  L  LT P         TT +
Sbjct: 272 AYDFSFLHTHHACTIQIGGSDQLGNITAGIDLIRRTSSTSL--LTDPAYGLTLPLLTTCT 329

Query: 234 GTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQ 291
           G K GK+   A+WL++  TS +  +Q++    DADV  +   LT L    +  + +   +
Sbjct: 330 GEKFGKSAGNAVWLSRSKTSDWALYQFFVRSSDADVERYLLSLTLLEPQFVKSIMQEHQE 389

Query: 292 GKEINEAKKIIATEITTMVHGREEAEK 318
            K++ +A+ ++A  +T ++ G    ++
Sbjct: 390 NKKLRKAQTVLADHMTRLIRGTHAMQR 416


>gi|326912301|ref|XP_003202492.1| PREDICTED: tyrosyl-tRNA synthetase, mitochondrial-like, partial
           [Meleagris gallopavo]
          Length = 271

 Score =  147 bits (372), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 88/269 (32%), Positives = 138/269 (51%), Gaps = 21/269 (7%)

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKL 221
           RL+  + +S  EF Y  LQAYDF+ L +++ CR+Q+GG+DQ GNI+ G +L  ++    +
Sbjct: 1   RLRSAEGMSLAEFLYPALQAYDFLHLHRHHGCRVQLGGADQMGNIMSGYELVTKMTGTDV 60

Query: 222 FALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPM 281
           F +T PL+T+ +G K+GKT   A+WLN++ TSP+  +Q++    D  V  + K  T LP+
Sbjct: 61  FGITVPLITSTTGDKLGKTAGNAVWLNRDKTSPFELYQFFVRQQDDIVEKYLKLFTFLPL 120

Query: 282 SEIDRMAKLQGKEINE--AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI 339
            EID + ++  +E  +   +K +A E+T +VHGRE  E    +A  C     HS      
Sbjct: 121 EEIDHIMEMHAREPEKWGPQKRLAAEVTKLVHGREGLE----SAKRCTKALYHSSVEALE 176

Query: 340 SISKDEVSR--------------GMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIIS 385
           ++S  E+                GM LL L  KA          + +    + +N   ++
Sbjct: 177 AMSDQELQELFRQAPSAELILEPGMTLLDLCRKANAIPHGPSGYQKITDGGVSVNGIRVT 236

Query: 386 N-EKLQIKLQDFDSTGNIKLSFGKKNHII 413
           N E + I  Q     G   L  GKKN+ I
Sbjct: 237 NPEAVLILGQHILKNGVSLLRIGKKNYYI 265


>gi|289812080|ref|ZP_06542709.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. AG3]
          Length = 160

 Score =  147 bits (371), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 67/155 (43%), Positives = 100/155 (64%), Gaps = 1/155 (0%)

Query: 32  SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESR 91
           +QG +  Y G+D TA SLH GHL  L+ L   Q+ GHKP++L+GG T +IGDPSF+   R
Sbjct: 6   AQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQAGHKPVALVGGATGLIGDPSFKAAER 65

Query: 92  RMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVN 151
           ++   + +QE + KI+   + F+ +  G+  A+  NN  W  S+  +  LR+IG  FSVN
Sbjct: 66  KLNTEETVQEWVAKIRKQVAPFLDFDCGENSAIAANNYDWFGSMNVLTFLRDIGKHFSVN 125

Query: 152 RMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDFV 185
           +M++ E+V+ RL R +Q +SF EF+Y +LQ YDF 
Sbjct: 126 QMINKEAVKQRLNRDDQGISFTEFSYNLLQGYDFA 160


>gi|297616908|ref|YP_003702067.1| tyrosyl-tRNA synthetase [Syntrophothermus lipocalidus DSM 12680]
 gi|297144745|gb|ADI01502.1| tyrosyl-tRNA synthetase [Syntrophothermus lipocalidus DSM 12680]
          Length = 405

 Score =  146 bits (368), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 115/395 (29%), Positives = 192/395 (48%), Gaps = 35/395 (8%)

Query: 10  SILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
            IL E  F+ ++ N      + +Q  + A +G D TA  +H GH   L  L   Q  GH+
Sbjct: 21  EILPEDEFLKKLENS-----IRNQKPLRAKLGLDPTAPDIHLGHSVVLNKLRQFQDLGHE 75

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIK-GIFSSFIKYGTGKTDALMLNN 128
              ++G  T  IGDPS + E+R+ +  +E+ +N    +  IF         K+   +  N
Sbjct: 76  VHLIIGDFTGRIGDPSGKSETRKQLSEEEVIQNARTYEMQIFKIL-----DKSKTYIYFN 130

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL  +++ D++   G  ++V RM+  E    R K    +S  EF Y ++Q YD V L 
Sbjct: 131 SEWLSRMRFADVINLAGK-YTVARMMEREDFSRRFKEGIPISVHEFLYPLMQGYDSVVLR 189

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWL 247
            +    +++GG+DQ  N++ G DL +        AL  P+L    G  KM K+L   I +
Sbjct: 190 AD----VELGGTDQKFNLLVGRDLQKEYGQEPQIALMMPILEGTDGVQKMSKSLGNYIGI 245

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM-AKLQGKEIN--EAKKIIAT 304
           N++    Y       +I D+ +  + + +T +PM EI  +   ++   +N  +AK  +A 
Sbjct: 246 NEDANEMYG---KTMSIPDSLITRYFELVTRVPMEEITEIETAIKSGRMNPRDAKMRLAR 302

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMP----TISISKDEVSRGMGLLTLIVKAG 360
           EI  M HG+EEA +A     E F +    + +P      +IS + +  G     L+V+AG
Sbjct: 303 EIVRMYHGQEEAYRAE----ERFKLVFQQREIPDDIEEFTISTNPIWVG----KLLVEAG 354

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
              ST+EA+R +K  A+K++   I +E   + L+D
Sbjct: 355 LCPSTSEAKRMVKQGAVKVDGKRIEDEDANLALED 389


>gi|206890846|ref|YP_002248124.1| tyrosyl-tRNA synthetase [Thermodesulfovibrio yellowstonii DSM
           11347]
 gi|206742784|gb|ACI21841.1| tyrosyl-tRNA synthetase [Thermodesulfovibrio yellowstonii DSM
           11347]
          Length = 404

 Score =  145 bits (367), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 113/377 (29%), Positives = 193/377 (51%), Gaps = 24/377 (6%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G+D TA  +H GH   L  +   Q+ GH+ I L+G  T +IGDPS + E+R+ +  +E+
Sbjct: 42  VGFDPTAPDIHLGHTVLLEKMRQFQELGHEVIFLIGDFTGMIGDPSGKTETRKPLTREEV 101

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
            +N E  K     F      KTD +  N+E W  S+  +D+ R  G+  +V RML  E  
Sbjct: 102 LKNAETYKE--QVFKILHPEKTD-IRFNSE-WFASMTALDMCRLAGA-ETVARMLEREDF 156

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
           + R    + ++ LEF Y +LQAYD V L  +    +++GG+DQ  N++ G  L +     
Sbjct: 157 KKRFTEGRPITILEFLYPLLQAYDSVYLKAD----IELGGTDQKFNLLMGRQLMKMYGME 212

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
           +   +T PLL    G  KM K+L   I +N+    P   +    +I+D  ++ + + L+ 
Sbjct: 213 EQVIITMPLLEGLDGVQKMSKSLGNYIGINE---PPDEMFGKLMSINDELMLKYYELLSH 269

Query: 279 LPMSEIDRMAK-LQGKEIN--EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQH 335
           + + E++ +   ++   IN  +AK+ +A EI    HGRE AEKA    +  F      + 
Sbjct: 270 ISIEELNELKTGIKEGRINPRDAKESLAFEIVNRYHGREYAEKARENFIRLFRKREIPEE 329

Query: 336 MPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           + T+ I   E  +G+ L  ++ ++G   ST+EA R +K   I++N+  I+N  +++    
Sbjct: 330 IETVEIK--EEKQGVWLPKILKESGIIKSTSEAVRLIKQGGIRVNDEQITNPDIKL---- 383

Query: 396 FDSTGNIKLSFGKKNHI 412
             + G   +  GK+  I
Sbjct: 384 --TAGEYIVRIGKRRFI 398


>gi|256089206|ref|XP_002580705.1| tyrosyl-tRNA synthetase [Schistosoma mansoni]
 gi|238666308|emb|CAZ36944.1| tyrosyl-tRNA synthetase, putative [Schistosoma mansoni]
          Length = 481

 Score =  145 bits (367), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 96/312 (30%), Positives = 163/312 (52%), Gaps = 26/312 (8%)

Query: 37  TAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMM-- 94
           + Y G+D T  SL  G+L  +  L     +G   ++++GG T I+GDPS R + R     
Sbjct: 34  SVYAGFDPTCDSLQLGNLVAVCGLLRCHLSGKDIVAVVGGSTGILGDPSGRIKKRDYQSL 93

Query: 95  -----RSQEIQENIEKIKGIFSSFIKYG---TGKTDAL-MLNNETWLCSIKYIDLLREIG 145
                 S  I+ +++KI   + + I      +GK  ++ ++NN  WL   K +D+  E+ 
Sbjct: 94  GQYASNSTLIEHSLDKIIYNYWTHIVPALPISGKLGSVHVVNNSDWLTHKKVMDVSCEVL 153

Query: 146 SFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGN 205
             F ++ +L  ESV+ R++   ++   EF Y I+QA DF+ L + ++C +Q+GG DQ GN
Sbjct: 154 PHFKLSELLEKESVKIRMESGNTMDLGEFFYPIVQAIDFLYLHEKFNCYMQVGGHDQIGN 213

Query: 206 IICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA------IWLNKEMTSPYNFWQ 259
           I CG++L  R    + F LT PLLTT  G K+GK++S +      IWL  +   PYNF+Q
Sbjct: 214 ITCGLNLIYRKLGRRAFGLTVPLLTTPDGQKLGKSVSNSECGMDTIWLMSKKLKPYNFYQ 273

Query: 260 YWRNIDDADVVS-FAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEK 318
              N+ D+ +     ++LT     EID++        +  +K+++T +   +   E A +
Sbjct: 274 KILNLPDSIISDKLVRQLTFFGPDEIDQLLT------DHKEKLVSTFLAYALQASELATR 327

Query: 319 A--ATAAMECFD 328
                +++ C D
Sbjct: 328 IFFPMSSVNCSD 339


>gi|15643244|ref|NP_228288.1| tyrosyl-tRNA synthetase [Thermotoga maritima MSB8]
 gi|81553099|sp|Q9WYU8|SYY_THEMA RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|4980991|gb|AAD35566.1|AE001725_11 tyrosyl-tRNA synthetase [Thermotoga maritima MSB8]
          Length = 401

 Score =  145 bits (366), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 112/400 (28%), Positives = 185/400 (46%), Gaps = 26/400 (6%)

Query: 15  RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLM 74
           R  +  IS    LD +  +G +   +G D +   LH GH   L  L   Q  GH  + ++
Sbjct: 12  RNVVDLISEEELLDRIKRKGKLRVKLGVDPSRPDLHLGHAVVLRKLREFQDLGHTVVLII 71

Query: 75  GGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCS 134
           G  T+ IGDPS R+E+R M+  +E+ EN    K       K    K   L  N E WL  
Sbjct: 72  GDFTARIGDPSGRNETRPMLTKEEVLEN---AKTYQEQAFKILDPKRTELRFNGE-WLDR 127

Query: 135 IKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCR 194
           + + D++  + S ++V RML  +    R K    ++  EF Y + QAYD V +  +    
Sbjct: 128 MTFADVII-LASKYTVARMLERDDFAKRFKEGIPIAISEFLYPLAQAYDSVAIQSD---- 182

Query: 195 LQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTS 253
           +++GG+DQ  N++ G  + E         +T P++    G  KM K+    I  N     
Sbjct: 183 VELGGTDQLFNLLVGRKIQEEYGQEPQIVMTMPIIEGTDGKLKMSKSYGNYIAFN---DP 239

Query: 254 PYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA-KLQGKEIN--EAKKIIATEITTMV 310
           P   +    +I D  ++ + + LT +P   I+    K++ K IN  + K ++A EIT   
Sbjct: 240 PEEMYGKLMSIPDELIIKYMRLLTDIPEERIEEYERKMKEKTINPRDVKMVLAYEITRFF 299

Query: 311 HGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARR 370
           HG E A+KA    ++ F        MP + IS+++      ++ L+V+ G A+S +EA+R
Sbjct: 300 HGEENAKKAQEHFVKVFQKKEIPDEMPVVEISQEK-----NIVDLLVEIGAASSKSEAKR 354

Query: 371 HLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            +    + I+   I + K  +     +  G   L  GK+ 
Sbjct: 355 LVSQGGVYIDGERIEDIKFTV-----EPDGERVLRVGKRK 389


>gi|160901549|ref|YP_001567130.1| tyrosyl-tRNA synthetase [Petrotoga mobilis SJ95]
 gi|160359193|gb|ABX30807.1| tyrosyl-tRNA synthetase [Petrotoga mobilis SJ95]
          Length = 397

 Score =  145 bits (366), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 106/364 (29%), Positives = 179/364 (49%), Gaps = 21/364 (5%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSF 86
           L+ L  +G +   +G D + + LH GH   L  L   Q+ GH    ++G  T+ IGDPS 
Sbjct: 24  LNKLREKGQLKVKLGVDPSRADLHLGHAVVLRKLKQFQELGHIVYLIIGDFTARIGDPSG 83

Query: 87  RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGS 146
           R ++R ++   E++EN +    +  +F      KT  +  N+E WL  + + D++  + S
Sbjct: 84  RSKTRPLLSEDEVRENSKTY--VEQAFRILHPDKT-VVKFNSE-WLSKLSFADIIN-LSS 138

Query: 147 FFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNI 206
            ++V RML  +    RLK  Q +S  EF Y + QAYD + +    +  +++GG+DQ  N+
Sbjct: 139 RYTVARMLERDDFSKRLKENQPISISEFLYPLAQAYDSIVI----EADVELGGTDQLFNL 194

Query: 207 ICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYWRNID 265
           + G  L E         LT PL+    G  KM K+    I  N    SP + +    +I 
Sbjct: 195 LVGRKLQEEFGQSPQVVLTMPLIEGTDGYLKMSKSYDNYIAFN---DSPQDIFGKVMSIP 251

Query: 266 DADVVSFAKRLTTLPMSEI-DRMAKLQGKEIN--EAKKIIATEITTMVHGREEAEKAATA 322
           D  ++ + K LT  P  +I D   +++ +E+N  + K ++A EI  +++ +EEAEKA   
Sbjct: 252 DHLIIKYMKYLTDTPKDKIKDIENQMKSEEVNPRDIKMVLAEEIVNLLYNKEEAEKAKQN 311

Query: 323 AMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNS 382
            +  F      + +P I I       G  +L ++ K     S +E +R +   AI+IN+ 
Sbjct: 312 FVSIFQKREMPEDLPEIQIKS-----GETILDIVSKTNVYDSNSEIKRAIMQGAIRINDE 366

Query: 383 IISN 386
            I +
Sbjct: 367 KIKD 370


>gi|168183056|ref|ZP_02617720.1| tyrosine--tRNA ligase [Clostridium botulinum Bf]
 gi|237794488|ref|YP_002862040.1| tyrosyl-tRNA synthetase [Clostridium botulinum Ba4 str. 657]
 gi|182673865|gb|EDT85826.1| tyrosine--tRNA ligase [Clostridium botulinum Bf]
 gi|229260524|gb|ACQ51557.1| tyrosine--tRNA ligase [Clostridium botulinum Ba4 str. 657]
          Length = 400

 Score =  145 bits (365), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 115/381 (30%), Positives = 191/381 (50%), Gaps = 28/381 (7%)

Query: 36  VTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMR 95
           +T  +G D TA  +H GH   L  +  LQ  GH+ + ++G  T  IGDP+ + ++R+ + 
Sbjct: 38  LTVKLGLDPTAPDIHIGHSVVLRKIRQLQDLGHRAVIIIGDFTGRIGDPTGKSKTRKPLT 97

Query: 96  SQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLS 155
            +E+  N +  +      I     KTD L  N+E WL  +   D + E+ S ++V RML 
Sbjct: 98  QEEVMFNAKTYEEQIFKII--DKDKTD-LKFNSE-WLGKLSLRDTI-ELTSKYTVARMLE 152

Query: 156 FESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER 215
            E  + R +   S+   EF Y +LQA+D V L    +  +++GG+DQ  N++ G  + + 
Sbjct: 153 REDFKKRFESHSSIGIHEFFYPLLQAFDSVSL----NADIELGGTDQRFNLLMGRTIQKD 208

Query: 216 LKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAK 274
                  A+  PLL    G  KM K+L   I +N++    Y       +I D  +V + +
Sbjct: 209 FDQESQVAILMPLLEGTDGKDKMSKSLGNYIGINEDANDIYG---KVMSIPDGMIVKYYE 265

Query: 275 RLTTLPMSEIDRM-AKLQGKEIN--EAKKIIATEITTMVHGREEAEKAATAAMECFDMSI 331
             T +   E+ ++ A+L+ +++N  + K  +A EI  + HG+E + KA       F    
Sbjct: 266 LATDIHPDEVAKIKARLEEEKVNPRDIKMELAKEIVRLYHGKEASTKAEANFKNIFQQGN 325

Query: 332 HSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
             + + TI ++  E +    ++ LIVKA FA S NEARR +K  A+KIN   + +E+ ++
Sbjct: 326 IPEDIDTIKVNLTETN----IVDLIVKAKFAPSKNEARRLVKQGAVKINGEKV-DEECKV 380

Query: 392 KLQDFDSTGNIKLSFGKKNHI 412
           K +D        L  GKK  I
Sbjct: 381 KNEDI-------LQVGKKKFI 394


>gi|222099167|ref|YP_002533735.1| Tyrosyl-tRNA synthetase [Thermotoga neapolitana DSM 4359]
 gi|221571557|gb|ACM22369.1| Tyrosyl-tRNA synthetase [Thermotoga neapolitana DSM 4359]
          Length = 394

 Score =  144 bits (362), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 108/400 (27%), Positives = 191/400 (47%), Gaps = 26/400 (6%)

Query: 15  RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLM 74
           R  +  +S    LD +  +G +   +G D +   LH GH   L  L   Q  GH  + ++
Sbjct: 12  RNVVDLVSEEELLDRIRRKGKLRVKLGVDPSRPDLHLGHAVVLRKLREFQDLGHTVVLII 71

Query: 75  GGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCS 134
           G  T+ IGDPS R+E+R M+  +E+ EN +  +    +F      +T+ L  N E WL  
Sbjct: 72  GDFTARIGDPSGRNETRPMLTKEEVLENAKTYQE--QAFKILDPERTE-LRFNGE-WLDR 127

Query: 135 IKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCR 194
           + + D++  + S ++V RML  +    R +    ++  EF Y + QAYD V +  +    
Sbjct: 128 MTFADVIV-LASKYTVARMLERDDFARRFREGIPITISEFLYPLAQAYDSVAIQAD---- 182

Query: 195 LQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTS 253
           +++GG+DQ  N++ G  + E         +T P++    G  KM K+    I  N    +
Sbjct: 183 VELGGTDQLFNLLVGRKIQEEYGQEPQIVMTMPIIEGTDGKLKMSKSYGNYIAFN---DT 239

Query: 254 PYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA-KLQGKEIN--EAKKIIATEITTMV 310
           P + +    +I D  ++ + + LT +P  +I+    K++  +IN  + K ++A EIT   
Sbjct: 240 PEDMYGKLMSIPDELIIKYMRLLTDIPEEQIEEYERKMKEGKINPRDVKMVLAYEITRFF 299

Query: 311 HGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARR 370
           HG E A+KA    ++ F        MP + +S++     M ++ L+VK G  +S +EA+R
Sbjct: 300 HGEENAKKAQEHFVKVFQRKELPDEMPVVELSQE-----MNIVDLLVKIGAVSSRSEAKR 354

Query: 371 HLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            +    + ++   + + K  +K       G   L  GKK 
Sbjct: 355 LISQGGVYLDGERVEDIKFIVK-----PDGERVLRVGKKK 389


>gi|170756305|ref|YP_001780828.1| tyrosyl-tRNA synthetase [Clostridium botulinum B1 str. Okra]
 gi|169121517|gb|ACA45353.1| tyrosyl-tRNA synthetase [Clostridium botulinum B1 str. Okra]
          Length = 400

 Score =  144 bits (362), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 116/381 (30%), Positives = 189/381 (49%), Gaps = 28/381 (7%)

Query: 36  VTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMR 95
           +T  +G D TA  +H GH   L  +  LQ  GH+ + ++G  T  IGDP+ + ++R+ + 
Sbjct: 38  LTVKLGLDPTAPDIHIGHSVVLRKIRQLQDLGHRAVIIIGDFTGRIGDPTGKSKTRKPLT 97

Query: 96  SQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLS 155
            +E+  N +  +      I     KTD L  N+E WL  +   D + E+ S ++V RML 
Sbjct: 98  QEEVMFNAKTYEEQIFKII--DKDKTD-LKFNSE-WLGKLSLRDTI-ELTSKYTVARMLE 152

Query: 156 FESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER 215
            E  + R +   S+   EF Y +LQA+D V L  +    +++GG+DQ  N++ G  + + 
Sbjct: 153 REDFKKRFESHSSIGIHEFFYPLLQAFDSVSLKAD----IELGGTDQRFNLLMGRTIQKD 208

Query: 216 LKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAK 274
                  A+  PLL    G  KM K+L   I +N++    Y       +I D  +V + +
Sbjct: 209 FDQESQVAILMPLLEGTDGKDKMSKSLGNYIGINEDANDIYG---KVMSIPDGMIVKYYE 265

Query: 275 RLTTLPMSEIDRM-AKLQGKEIN--EAKKIIATEITTMVHGREEAEKAATAAMECFDMSI 331
             T +   E+ +M A+L+ + +N  + K  +A EI  + HG E + KA       F    
Sbjct: 266 LATDIHPDEVAKMKARLEEENVNPRDIKMELAKEIVRLYHGEEASIKAEENFKNIFQQGN 325

Query: 332 HSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
             + + TI ++  E +    ++ LIVKA FA S NEARR +K  A+KIN   + +E+ ++
Sbjct: 326 IPEDIDTIKVNLTETN----IVDLIVKAKFAPSKNEARRLVKQGAVKINGEKV-DEECKV 380

Query: 392 KLQDFDSTGNIKLSFGKKNHI 412
           K +D        L  GKK  I
Sbjct: 381 KNEDI-------LQVGKKKFI 394


>gi|148269582|ref|YP_001244042.1| tyrosyl-tRNA synthetase [Thermotoga petrophila RKU-1]
 gi|281411699|ref|YP_003345778.1| tyrosyl-tRNA synthetase [Thermotoga naphthophila RKU-10]
 gi|147735126|gb|ABQ46466.1| tyrosyl-tRNA synthetase [Thermotoga petrophila RKU-1]
 gi|281372802|gb|ADA66364.1| tyrosyl-tRNA synthetase [Thermotoga naphthophila RKU-10]
          Length = 401

 Score =  144 bits (362), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 110/400 (27%), Positives = 188/400 (47%), Gaps = 26/400 (6%)

Query: 15  RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLM 74
           R  +  +S    LD +  +G +   +G D +   LH GH   L  L   Q  GH  + ++
Sbjct: 12  RNVVDFVSEEELLDRIKRKGKLRVKLGVDPSRPDLHLGHAVVLRKLREFQDLGHTVVLII 71

Query: 75  GGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCS 134
           G  T+ IGDPS R+E+R M+  +E+ EN +  +    +F      +T+ L  N E WL  
Sbjct: 72  GDFTARIGDPSGRNETRPMLTREEVLENAKTYQE--QAFKILDPERTE-LRFNGE-WLDR 127

Query: 135 IKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCR 194
           + + D++  + S ++V RML  +    R K    ++  EF Y + QAYD V +  +    
Sbjct: 128 MTFADVIV-LASKYTVARMLERDDFAKRFKEGIPITISEFLYPLAQAYDSVAIQAD---- 182

Query: 195 LQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTS 253
           +++GG+DQ  N++ G  + E         +T P++    G  KM K+    I  N     
Sbjct: 183 VELGGTDQLFNLLVGRKIQEEYGQEPQIVMTMPIIEGTDGKLKMSKSYGNYIAFN---DP 239

Query: 254 PYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA-KLQGKEIN--EAKKIIATEITTMV 310
           P   +    +I D  ++ + + LT +P   I+    K++ K IN  + K ++A EIT   
Sbjct: 240 PEEMYGKLMSIPDELIIKYMRLLTDVPEERIEEYERKMKEKTINPRDVKMVLAYEITRFF 299

Query: 311 HGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARR 370
           HG E A+KA    ++ F        MP + IS+++      ++ L+V+ G  +S +EA+R
Sbjct: 300 HGEENAKKAQEQFVKVFQKKEIPDEMPIVEISQEK-----NIVDLLVEIGAVSSKSEAKR 354

Query: 371 HLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            +    + I+   I + K  +K       G   L  GK+ 
Sbjct: 355 LVAQGGVYIDGERIEDIKFTVK-----PVGEQVLKVGKRK 389


>gi|170759521|ref|YP_001786595.1| tyrosyl-tRNA synthetase [Clostridium botulinum A3 str. Loch Maree]
 gi|169406510|gb|ACA54921.1| tyrosine--tRNA ligase [Clostridium botulinum A3 str. Loch Maree]
          Length = 400

 Score =  143 bits (361), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 109/356 (30%), Positives = 178/356 (50%), Gaps = 20/356 (5%)

Query: 36  VTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMR 95
           +T  +G D TA  +H GH   L  +  LQ  GH+ + ++G  T  IGDP+ + ++R+ + 
Sbjct: 38  LTVKLGLDPTAPDIHIGHSVVLRKIRQLQDLGHRAVIIIGDFTGRIGDPTGKSKTRKPLT 97

Query: 96  SQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLS 155
            +E+  N +  +      I     KTD L  N+E WL  +   D + E+ S ++V RML 
Sbjct: 98  QEEVMFNAKTYEEQIFKII--DKDKTD-LKFNSE-WLGKLSLRDTI-ELTSKYTVARMLE 152

Query: 156 FESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER 215
            E  + R +   S+   EF Y +LQA+D V L  +    +++GG+DQ  N++ G  + + 
Sbjct: 153 REDFKKRFESHSSIGIHEFFYPLLQAFDSVSLKAD----IELGGTDQRFNLLMGRTIQKD 208

Query: 216 LKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAK 274
                  A+  PLL    G  KM K+L   I +N++    Y       +I D  +V + +
Sbjct: 209 FDQESQVAILMPLLEGTDGKDKMSKSLGNYIGINEDANDIYG---KVMSIPDGMIVKYYE 265

Query: 275 RLTTLPMSEIDRM-AKLQGKEIN--EAKKIIATEITTMVHGREEAEKAATAAMECFDMSI 331
             T +   E+ ++ A L+ + +N  + K  +A EI  + HG E + KA       F    
Sbjct: 266 LATDIHPDEVAKIKAILEAENVNPRDIKMELAKEIVRLYHGEEASVKAEGNFKNIFQQGN 325

Query: 332 HSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNE 387
             + + TI ++ DE++    ++ LIVKA FA S NEARR +K  A+KIN   +  E
Sbjct: 326 IPEDIDTIKVNLDEIN----IVDLIVKAKFAPSKNEARRLVKQGAVKINGEKVDEE 377


>gi|220931414|ref|YP_002508322.1| Tyrosyl-tRNA synthetase [Halothermothrix orenii H 168]
 gi|219992724|gb|ACL69327.1| Tyrosyl-tRNA synthetase [Halothermothrix orenii H 168]
          Length = 407

 Score =  142 bits (359), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 102/361 (28%), Positives = 176/361 (48%), Gaps = 17/361 (4%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  L   Q  GH+   ++G  T +IGDP+ +  +R+ +  +E+
Sbjct: 41  LGLDPTAPDIHLGHSVVLRKLKQFQDLGHEVYLIIGDFTGMIGDPTGKSVTRKQLTEEEV 100

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           +EN +  +  FS  +     K    ++ N  WL  +   D++ E+ S ++V RML  E  
Sbjct: 101 RENAKTYREQFSKILNPDKTK----LVFNSNWLSDLNLSDVI-ELSSKYTVARMLEREDF 155

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R K  + +S  EF Y ++Q YD V +  +    +++GG+DQ  N++ G  L +     
Sbjct: 156 SQRYKSGKPISIHEFIYPLMQGYDSVAIKAD----IELGGTDQKFNLLVGRHLQKEFGQK 211

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               +  P+L    G  KM K+L   I +N E   P + +    +I D+ +  + + LT 
Sbjct: 212 PQVIMMMPILEGLDGVNKMSKSLDNYIGINDE---PKDMYGKVMSIPDSLITRYFELLTD 268

Query: 279 LPMSEIDRMAK-LQGKEINEA--KKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQH 335
           +P  +I+ M K ++   +N    KK +A  I T  HG++ A +A       F      + 
Sbjct: 269 VPEDKINEMKKSMEEDRVNPMNFKKELARIIVTEYHGQDAAREAEKEFKRVFSQGKLPED 328

Query: 336 MPTISISKDEVSRG-MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
           +P + I + ++  G M ++ LI   G   S +EARR +K  A+ IN+    +    IK++
Sbjct: 329 IPEVIIEQKDLEDGKMWIVHLIAATGLVKSNSEARRMIKQGAVSINDEKHKSINEDIKVE 388

Query: 395 D 395
           D
Sbjct: 389 D 389


>gi|262039163|ref|ZP_06012483.1| tyrosine--tRNA ligase [Leptotrichia goodfellowii F0264]
 gi|261746779|gb|EEY34298.1| tyrosine--tRNA ligase [Leptotrichia goodfellowii F0264]
          Length = 410

 Score =  142 bits (359), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 106/365 (29%), Positives = 183/365 (50%), Gaps = 29/365 (7%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D + + LH GH   L  L   Q  GH+   L+G  T  IGDP+ + E+R+M+ ++++
Sbjct: 51  LGIDPSGTDLHFGHAVPLRKLKQFQDLGHQVFFLIGTFTGRIGDPTGKSETRKMLSAEQV 110

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           QENI+      S  +     K    ++ N  WL  +   D+LR + S F+V++M+S E  
Sbjct: 111 QENIKTYLDQVSLILDLDKIK----VVYNGDWLEKLNLEDVLR-LLSQFTVSQMISREDF 165

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             RL   + +S +EF Y ILQ YD VEL  +    +++G ++Q  N++ G DL +     
Sbjct: 166 AKRLSENKPVSLIEFMYPILQGYDSVELRAD----VELGATEQKFNLLRGRDLQKNAGQE 221

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
           +   +  P+L    G  KM K+L+  I +     SP + +    ++ D  +  + + +T 
Sbjct: 222 QQVCMIMPILEGLDGVEKMSKSLNNYIGVK---DSPNDMFGKVMSVSDDLMYRYYEVITE 278

Query: 279 LPMSEIDRMAKLQGKEIN-------EAKKIIATEITTMVHGREEAEKAATAAMECFDMSI 331
           +   EI +M     +EIN       EAKK +  E+  + H  EE++KA       F    
Sbjct: 279 VAQEEIAKMK----EEINNGTLHPMEAKKRLGEEVVKIYHNEEESKKAREWFENVFSKKN 334

Query: 332 HSQHMPTISISKDEVSRGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQ 390
               +P + +   E+    G++ L+V+  G  +ST+EARR ++    KIN+  + + K  
Sbjct: 335 LDVDLPEVELEYKEI----GVIDLLVRETGLLSSTSEARRLVEQGGFKINDEAVKDVKAV 390

Query: 391 IKLQD 395
           +K+Q+
Sbjct: 391 VKIQN 395


>gi|325288452|ref|YP_004264633.1| tyrosyl-tRNA synthetase [Syntrophobotulus glycolicus DSM 8271]
 gi|324963853|gb|ADY54632.1| tyrosyl-tRNA synthetase [Syntrophobotulus glycolicus DSM 8271]
          Length = 413

 Score =  142 bits (359), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 95/352 (26%), Positives = 181/352 (51%), Gaps = 17/352 (4%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  +   Q  GH+ + ++G  T+ IGDPS + E+R+ M  +++
Sbjct: 49  LGLDPTAPDIHLGHTVPLYKMKQFQDLGHQAVIIIGDFTAKIGDPSGKSETRKPMTEEQV 108

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           Q N +  K      +     + +     N +WL ++ + D+++ + S  +V RML  +  
Sbjct: 109 QHNAQTYKEQIFKILDPDKTRVEF----NSSWLSNMTFSDVIK-LASCTTVARMLERDDF 163

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R   E+ +S  EF Y ++Q YD V L  +    +++GG+DQ  N++ G  L +     
Sbjct: 164 AKRYAEERPISIHEFFYPLMQGYDSVALQAD----VELGGTDQKFNLLMGRTLQKEFGQE 219

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
              ALT+P+L    G  KM K+L   I + +   +P   +    ++ D  ++ + + +T 
Sbjct: 220 PQVALTTPILEGLDGVHKMSKSLGNYIGVYE---APREMFGKTMSMPDEIMIRYFELITA 276

Query: 279 LPMSEIDRMAK-LQGKEIN--EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQH 335
           +P+ +I R+ + LQ   ++  + K  +  EI  + HG+++A++A    ++ F        
Sbjct: 277 VPVLDIRRLEQGLQDGSVHPRDLKMRLGWEIVHIYHGKKQADEAKEEFIKMFQRKEAPDE 336

Query: 336 MPTISISKDEVSRGM-GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISN 386
           MP ISI++  +  G+  +++++V AG   S  EARR ++   ++IN+  +S 
Sbjct: 337 MPEISIAQIGLESGVTDMVSILVSAGLVPSRGEARRLIEQGGVRINDEKVSQ 388


>gi|308492005|ref|XP_003108193.1| CRE-YARS-1 protein [Caenorhabditis remanei]
 gi|308249041|gb|EFO92993.1| CRE-YARS-1 protein [Caenorhabditis remanei]
          Length = 468

 Score =  142 bits (359), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 108/368 (29%), Positives = 184/368 (50%), Gaps = 36/368 (9%)

Query: 7   DFLSILSERGFIHQISNPREL----DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
           D++  LS+R  + Q S P +L    +    Q     Y G+D TA SLH G+L  L+ L  
Sbjct: 25  DYIRDLSKRKPL-QHSYPADLLNKYEAELKQLPPYVYAGFDPTAESLHVGNLLILVNLIR 83

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKI-KGIFSSFIKYGTGKT 121
            Q+ G +PI+L+G  T+ IGDPS +   R ++    +  N +K+ + I + F        
Sbjct: 84  CQQFGLRPIALIGEFTASIGDPSGKKSERDLLGEDVVIHNSKKVSEQIRNVFANTCRSSE 143

Query: 122 DALMLNNETWL-------CSIKYI---------DLLREIGSFFSVNRMLSFESVRSRLKR 165
             +++NN  WL        +I Y+         D  RE  S   + +ML  ++++SRL  
Sbjct: 144 PPIVVNNNDWLGKVNSNIVNILYLFSHFQISLRDFFRECKS-MQLGKMLRMKTIKSRL-- 200

Query: 166 EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICG---IDLGERLKTPKLF 222
           E  LS+ EF+Y  +QAYD+  L++ + CR Q+GG DQ G++  G   I     L   +  
Sbjct: 201 ETGLSYTEFSYQTMQAYDWYTLSEKFGCRFQLGGYDQLGHLDFGAHYIKKRGNLSDNRFA 260

Query: 223 A-LTSPLLTTASGTKMGKTL-SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLP 280
           A +  P+LT ++G K+GK+   GA+WL+   TSP++F+Q++  + D          +   
Sbjct: 261 AGVCFPILTDSAGNKLGKSEGGGALWLDPVKTSPFHFYQFFAQLHDDKAEELLLLFSLRG 320

Query: 281 MSEIDRMAKLQGKEINE--AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPT 338
           + +++ + +     + +  A+K +A E+T MVHG    E    +A+ C      S+    
Sbjct: 321 VEDLEELLQNHRNNLGKWIAQKELAMEVTKMVHG----EDGLDSALRCTKAMFGSKKADL 376

Query: 339 ISISKDEV 346
             +S+ E+
Sbjct: 377 TGLSRSEI 384


>gi|153939021|ref|YP_001390553.1| tyrosyl-tRNA synthetase [Clostridium botulinum F str. Langeland]
 gi|152934917|gb|ABS40415.1| tyrosine--tRNA ligase [Clostridium botulinum F str. Langeland]
 gi|295318634|gb|ADF99011.1| tyrosine--tRNA ligase [Clostridium botulinum F str. 230613]
          Length = 400

 Score =  142 bits (359), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 115/381 (30%), Positives = 189/381 (49%), Gaps = 28/381 (7%)

Query: 36  VTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMR 95
           +T  +G D TA  +H GH   L  +  LQ  GH+ + ++G  T  IGDP+ + ++R+ + 
Sbjct: 38  LTVKLGLDPTAPDIHIGHSVVLRKIRQLQDLGHRAVIIIGDFTGRIGDPTGKSKTRKPLT 97

Query: 96  SQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLS 155
            +E+  N +  +      I     KTD L  N+E WL  +   D + E+ S ++V RML 
Sbjct: 98  QEEVMFNAKTYEEQIFKII--DKDKTD-LKFNSE-WLGKLSLRDTI-ELTSKYTVARMLE 152

Query: 156 FESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER 215
            E  + R +   S+   EF Y +LQA+D V L  +    +++GG+DQ  N++ G  + + 
Sbjct: 153 REDFKKRFESHSSIGIHEFFYPLLQAFDSVSLKAD----IELGGTDQRFNLLMGRTIQKD 208

Query: 216 LKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAK 274
                  A+  PLL    G  KM K+L   I +N++    Y       +I D  +V + +
Sbjct: 209 FDQESQVAILMPLLEGTDGKDKMSKSLGNYIGINEDANDIYG---KVMSIPDGMIVKYYE 265

Query: 275 RLTTLPMSEIDRM-AKLQGKEIN--EAKKIIATEITTMVHGREEAEKAATAAMECFDMSI 331
             T +   E+ +M A+L+ + +N  + K  +A EI  + HG E + KA       F    
Sbjct: 266 LATDIHPDEVAKMKARLEEENVNPRDIKMELAKEIVRLYHGEEASVKAEANFKNIFQQGN 325

Query: 332 HSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
             + + TI ++  + +    ++ LIVKA FA S NEARR +K  A+KIN   + +E+ ++
Sbjct: 326 IPEDIDTIKVNLTKTN----IVDLIVKAKFAPSKNEARRLVKQGAVKINGEKV-DEECKV 380

Query: 392 KLQDFDSTGNIKLSFGKKNHI 412
           K +D        L  GKK  I
Sbjct: 381 KNEDI-------LQVGKKKFI 394


>gi|78043825|ref|YP_360390.1| tyrosyl-tRNA synthetase [Carboxydothermus hydrogenoformans Z-2901]
 gi|115305800|sp|Q3ABU4|SYY_CARHZ RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|77995940|gb|ABB14839.1| tyrosyl-tRNA synthetase [Carboxydothermus hydrogenoformans Z-2901]
          Length = 411

 Score =  142 bits (359), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 100/352 (28%), Positives = 175/352 (49%), Gaps = 17/352 (4%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  L   Q  GH+ I ++G  T+ IGDP+ + E+R+ +  +E+
Sbjct: 44  LGLDPTAPDIHLGHTVVLQKLKQFQSLGHEVIIIIGDFTAQIGDPTGKKETRKQLSWEEV 103

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
            EN +  +      +     K    M+ N  WL  + + D+++ + S ++V RML  E  
Sbjct: 104 LENAKTYQEQIFKILDPAKTK----MVFNSEWLAKLTFADVIK-LASKYTVARMLEREDF 158

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R K  Q +S  EF Y ++Q YD V L  +    +++GG+DQ  N++ G  L +     
Sbjct: 159 AKRFKEGQPISIHEFFYPLMQGYDSVALKAD----IELGGTDQKFNLLMGRTLQKEYGQE 214

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
              A+  P+L    G  KM K+L   I +N+   +P   +    +I D  ++ + + LT+
Sbjct: 215 PQIAIMMPILEGTDGVQKMSKSLGNYIGINE---TPQEMFGKIMSIPDTLILRYLELLTS 271

Query: 279 LPMSEIDRMA-KLQGKEIN--EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQH 335
           +PM  I+ M  +++   +N  +AK  +A EI T  H RE A++A    ++ F        
Sbjct: 272 VPMETINEMKIQMETGVLNPRDAKVFLAKEIITQYHSREAADEAEREFIKIFREKELPDE 331

Query: 336 MPTISISKDEVSRGMGLLT-LIVKAGFATSTNEARRHLKSNAIKINNSIISN 386
           +P   +  + +  G+ LL  ++  AG   S +EA+R +   A+ +N   I++
Sbjct: 332 IPEYKVPGELIDGGVVLLPKVLFSAGTVKSISEAKRLISQGAVLVNQEKIND 383


>gi|187780180|ref|ZP_02996653.1| hypothetical protein CLOSPO_03776 [Clostridium sporogenes ATCC
           15579]
 gi|187773805|gb|EDU37607.1| hypothetical protein CLOSPO_03776 [Clostridium sporogenes ATCC
           15579]
          Length = 400

 Score =  142 bits (357), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 114/381 (29%), Positives = 187/381 (49%), Gaps = 28/381 (7%)

Query: 36  VTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMR 95
           +T  +G D TA  +H GH   L  +  LQ  GH+ + ++G  T  IGDP+ + ++R+ + 
Sbjct: 38  LTVKLGLDPTAPDIHIGHSVVLRKIRQLQDLGHRAVIIIGDFTGRIGDPTGKSKTRKPLT 97

Query: 96  SQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLS 155
            +E+  N +  +      I     KTD L  N+E WL  +   D + E+ S ++V RML 
Sbjct: 98  QEEVMFNAKTYEEQIFKII--DKDKTD-LKFNSE-WLGKLSLRDTI-ELTSKYTVARMLE 152

Query: 156 FESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER 215
            E  + R +   S+   EF Y +LQA+D V L       +++GG+DQ  N++ G  + + 
Sbjct: 153 REDFKKRFESHSSIGIHEFFYPLLQAFDSVTLK----ADIELGGTDQRFNLLMGRTIQKD 208

Query: 216 LKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAK 274
                  A+  PLL    G  KM K+L   I +N++    Y       +I D  +V + +
Sbjct: 209 FDQESQVAILMPLLEGTDGKDKMSKSLGNYIGINEDANDIYG---KVMSIPDEMIVKYYE 265

Query: 275 RLTTLPMSEIDRM-AKLQGKEIN--EAKKIIATEITTMVHGREEAEKAATAAMECFDMSI 331
             T +   E+ ++  KL+ + +N  + K  +A EI  + HG E + KA       F    
Sbjct: 266 LATDIHPDEVAKIKTKLEKENVNPRDVKMELAKEIVRLYHGEEASIKAEENFKNIFQQGN 325

Query: 332 HSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
             + + T+  + DE +    ++ LIVKA FA S NEARR +K  A+K+N   + +E+ ++
Sbjct: 326 MPEDIDTLEANLDETN----IVDLIVKAEFAPSKNEARRLVKQGAVKVNGEKV-DEECKV 380

Query: 392 KLQDFDSTGNIKLSFGKKNHI 412
           K +D        L  GKK  I
Sbjct: 381 KNEDI-------LQVGKKKFI 394


>gi|113461450|ref|YP_719519.1| tyrosyl-tRNA synthetase [Haemophilus somnus 129PT]
 gi|170718444|ref|YP_001783661.1| tyrosyl-tRNA synthetase [Haemophilus somnus 2336]
 gi|112823493|gb|ABI25582.1| tyrosyl-tRNA synthetase [Haemophilus somnus 129PT]
 gi|168826573|gb|ACA31944.1| tyrosyl-tRNA synthetase [Haemophilus somnus 2336]
          Length = 395

 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 107/382 (28%), Positives = 184/382 (48%), Gaps = 29/382 (7%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           + SE+ FI ++   R L I          +G D TA  +H GH   L  L   Q  GH+ 
Sbjct: 18  VFSEQDFIEKLKENRPLRI---------KLGADPTAPDIHLGHTVVLNKLRQFQNFGHEV 68

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           I L+G  T+ +GDPS ++ +R  +  +++  N E  K   +   K    +   ++ N++ 
Sbjct: 69  IFLIGDFTATVGDPSGKNTTRPPLSREDVLRNAETYK---TQIFKILDPQKTQVVFNSD- 124

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           WL  +  I ++R + S ++V RML  +  + R    Q ++  EF Y +LQ +D V L   
Sbjct: 125 WLGKLGTIGMIR-LASNYTVARMLERDDFKKRFNNNQPIAIHEFIYPLLQGHDSVHL--- 180

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNK 249
            +  +++GG+DQ  N++ G +L +        A+T PLL    G  KM K+L   I + +
Sbjct: 181 -EADVELGGTDQTFNLLMGRELQKSCGQKPQVAITMPLLVGLDGEKKMSKSLGNYIGVTE 239

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATEIT 307
              +P N +    +I D  +  +   L+  P++EI ++ K    G+   + K ++A EI 
Sbjct: 240 ---TPSNMFGKIMSISDELMWDWYNLLSFRPLTEITQLKKDVENGRNPRDVKILLAKEII 296

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
           T  H  ++A+ A    ++ F        MP  + + +     +GL  L+  AG   ST+E
Sbjct: 297 TRFHSADDADTAEQEFIDRFQKGAIPDDMPEFTFTGE-----IGLANLLKDAGLVGSTSE 351

Query: 368 ARRHLKSNAIKINNSIISNEKL 389
           A R ++   +KIN   + N KL
Sbjct: 352 AIRMVQQGGVKINGEKVDNAKL 373


>gi|195953012|ref|YP_002121302.1| tyrosyl-tRNA synthetase [Hydrogenobaculum sp. Y04AAS1]
 gi|195932624|gb|ACG57324.1| tyrosyl-tRNA synthetase [Hydrogenobaculum sp. Y04AAS1]
          Length = 392

 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 115/382 (30%), Positives = 182/382 (47%), Gaps = 28/382 (7%)

Query: 35  VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMM 94
           VV A  G+D TA  LH GH   L  L   Q  GH+ I L+G  T++IGDP+ R+E+R  +
Sbjct: 34  VVKA--GFDPTAKDLHLGHTVLLQKLRDFQNLGHEIIFLIGDFTAMIGDPTGRNETRPPL 91

Query: 95  RSQEIQENIEKIK-GIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRM 153
             +E+ EN +  +  +F    K  T      +L N  WL ++   D++  + S ++V RM
Sbjct: 92  SKEEVLENAKTYQEQVFKILDKDKTK-----ILYNSEWLSTMTTKDIVN-LASKYTVARM 145

Query: 154 LSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLG 213
           L  +  + R K    +   EF Y + Q YD V L  +    +++GGSDQ  N++ G +L 
Sbjct: 146 LERDDFQKRYKEGSPIHIHEFLYPLFQGYDSVILKAD----IEIGGSDQKFNLLVGRELQ 201

Query: 214 ERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSF 272
           +     K   +T PLL    G  KM K+    I L  +   P + +    +I D  +  +
Sbjct: 202 KDYGLEKQVCITMPLLVGIDGVKKMSKSYGNYIALKDD---PKDMFGKIMSISDELMYDY 258

Query: 273 AKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIH 332
              LT     EI+++  +      EAKK +A  I +  H  E+A++A       F     
Sbjct: 259 YTLLTDKTPDEIEKIKAMHPM---EAKKQLAYIIVSRFHSEEKAKEAKEFFESTFSQKEF 315

Query: 333 SQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
            +  P  S S  +    +    LIVK GFATS NEARR +    ++IN   I++   +I 
Sbjct: 316 PKDAPVFSFSDKD---SLKAYELIVKIGFATSNNEARRIISGGGLRINGEKITDPNKEIV 372

Query: 393 LQDFDSTGNIKLSFGKKNHIIC 414
           +++      +++  GKK+  I 
Sbjct: 373 VEN-----ELRVQVGKKHFAII 389


>gi|34765046|ref|ZP_00145341.1| Tyrosyl-tRNA synthetase [Fusobacterium nucleatum subsp. vincentii
           ATCC 49256]
 gi|27885617|gb|EAA23062.1| Tyrosyl-tRNA synthetase [Fusobacterium nucleatum subsp. vincentii
           ATCC 49256]
          Length = 148

 Score =  141 bits (355), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 70/146 (47%), Positives = 92/146 (63%), Gaps = 4/146 (2%)

Query: 99  IQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
           I  N+E IK     FI +   K  A++ NN  WL ++ YI+ LR++G  FSVNRML+ E 
Sbjct: 2   IDHNVECIKKQMQKFIDFSDDK--AILANNADWLRNLNYIEFLRDVGEHFSVNRMLAAEC 59

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
            +SR+  E  LSFLEFNYMI+QAYDF  L   Y+C +Q+GG DQW N+I G++L  R   
Sbjct: 60  YKSRM--ENGLSFLEFNYMIMQAYDFYVLNHKYNCTMQLGGDDQWSNMIAGVELLRRKDR 117

Query: 219 PKLFALTSPLLTTASGTKMGKTLSGA 244
              +A+T  LLT + G KMG T  GA
Sbjct: 118 KSAYAMTCTLLTNSEGKKMGPTAKGA 143


>gi|83590545|ref|YP_430554.1| tyrosyl-tRNA synthetase [Moorella thermoacetica ATCC 39073]
 gi|115305809|sp|Q2RHS8|SYY_MOOTA RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|83573459|gb|ABC20011.1| tyrosyl-tRNA synthetase [Moorella thermoacetica ATCC 39073]
          Length = 413

 Score =  140 bits (354), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 110/381 (28%), Positives = 183/381 (48%), Gaps = 27/381 (7%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  L   Q+ GH+ I ++G  T  IGDP+ + E+RR +   EI
Sbjct: 53  LGLDPTAPDIHLGHTVVLQKLRQFQELGHQVIIIIGDFTGRIGDPTGKSETRRQLTEAEI 112

Query: 100 QENIEKIK-GIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
             N E  K  IF       T  T      N  WL  + + +++ E+ +  +V RML  + 
Sbjct: 113 LANAETYKEQIFKVLDPEQTRVT-----FNSHWLGKLTFAEVI-ELAARTTVARMLERDD 166

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
              R +  + +S  EF Y ++Q YD V LA +    +++GG+DQ  N++ G  L      
Sbjct: 167 FARRFQENRPISIHEFFYPLMQGYDSVALAAD----VELGGTDQKFNLLMGRHLQREYGQ 222

Query: 219 PKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT 277
               A+  P+L    G  KM K+L   I + +   SP   +    ++ D  ++++ + +T
Sbjct: 223 EPQVAMMMPILPGLDGVQKMSKSLGNYIGIKE---SPREMYGKTMSLPDELMLTYYELVT 279

Query: 278 TLPMSEID--RMAKLQGK-EINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQ 334
            +P+ E+   R     G     +AK  +A EI  M H  E A +A     + F       
Sbjct: 280 AVPLEELAAIRQGLASGSLHPRDAKMRLAREIVAMYHTPEAALEAEREFRQVFQQHDLPD 339

Query: 335 HMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
            MP ++I +D V     L  L+V+AG A ST+EARR ++  A+KI+   +++   +++++
Sbjct: 340 DMPELTIKEDRV----WLPRLMVQAGLAPSTSEARRLIRQGAVKIDGERVTDPDTEVEVR 395

Query: 395 DFDSTGNIKLSFGKKNHIICH 415
           +    G + L  GK+     H
Sbjct: 396 E----GQV-LQAGKRKFARLH 411


>gi|322805525|emb|CBZ03089.1| tyrosyl-tRNA synthetase [Clostridium botulinum H04402 065]
          Length = 400

 Score =  140 bits (353), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 114/381 (29%), Positives = 189/381 (49%), Gaps = 28/381 (7%)

Query: 36  VTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMR 95
           +T  +G D TA  +H GH   L  +  LQ  GH+ + ++G  T  IGDP+ + ++R+ + 
Sbjct: 38  MTVKLGLDPTAPDIHIGHSVVLRKIRQLQDLGHRAVIIIGDFTGRIGDPTGKSKTRKPLT 97

Query: 96  SQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLS 155
             E+  N +  +      I     KTD L  N+E WL  +   D + E+ S ++V RML 
Sbjct: 98  QDEVMFNAKTYEEQIFKII--DKDKTD-LKFNSE-WLGKLSLRDTI-ELTSKYTVARMLE 152

Query: 156 FESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER 215
            E  + R +   S+   EF Y +LQA+D V L  +    +++GG+DQ  N++ G  + + 
Sbjct: 153 REDFKKRFESHSSIGIHEFFYPLLQAFDSVSLKAD----IELGGTDQRFNLLMGRTIQKD 208

Query: 216 LKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAK 274
                  A+  PLL    G  KM K+L   I +N++    Y       +I D  +V + +
Sbjct: 209 FDQESQVAILMPLLEGTDGKDKMSKSLGNYIGINEDANDIYG---KVMSIPDKMIVKYYE 265

Query: 275 RLTTLPMSEIDRM-AKLQGKEIN--EAKKIIATEITTMVHGREEAEKAATAAMECFDMSI 331
             T +   +I ++ A+L+ +++N  + K  +A EI  + HG E + KA       F    
Sbjct: 266 LATDIHPDKIAKIKARLEEEKVNPRDIKMELAKEIVRLYHGEEASVKAEVNFKNIFQQGN 325

Query: 332 HSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
             + + TI ++  E +    ++ LI+KA FA S NEARR +K  A+KIN   + +E+ ++
Sbjct: 326 IPEDIDTIKVNLTETN----IVDLIIKAKFAPSKNEARRLVKQGAVKINGEKV-DEECKV 380

Query: 392 KLQDFDSTGNIKLSFGKKNHI 412
           K +D        L  GKK  I
Sbjct: 381 KNEDI-------LQVGKKKFI 394


>gi|328944262|ref|ZP_08241726.1| tyrosine--tRNA ligase [Atopobium vaginae DSM 15829]
 gi|327491181|gb|EGF22956.1| tyrosine--tRNA ligase [Atopobium vaginae DSM 15829]
          Length = 410

 Score =  140 bits (353), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 117/400 (29%), Positives = 188/400 (47%), Gaps = 46/400 (11%)

Query: 30  LCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDE 89
           L  Q  +T  +G D T+  LH GH   L  +   Q  GH  + ++G GT++IGDPS RD 
Sbjct: 33  LSRQEPLTVKLGVDPTSPDLHLGHAVPLRKMRQFQDLGHNVVLIIGNGTALIGDPSGRDS 92

Query: 90  SRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL---MLNNETWLCSIKYIDLLREIG- 145
           +R  +  + +++N        +++++      D     +++N  WL   K +DL + +G 
Sbjct: 93  TRPPLTEEAVEKNA-------ATYVEQAMKILDPQKTKIVHNGEWL---KPLDLSKMLGL 142

Query: 146 -SFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWG 204
            S F+V R+L  E   +R    QS+S  EF Y +LQAYD V +  +    ++MGG+DQ  
Sbjct: 143 MSKFNVARILEREDFHNRYTNNQSISLHEFIYPVLQAYDSVVVHAD----VEMGGNDQIF 198

Query: 205 NIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
           N++ G DL          ALT PLL    GT KM K+    + L     S  + +    +
Sbjct: 199 NLLAGRDLMRAEGMEPQVALTMPLLVGTDGTKKMSKSYGNYVGLTD---SADDMFGKLMS 255

Query: 264 IDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKIIATEITTMVHGREEAEKAA 320
           I D  + S+ +  +T  + EID +    K +  +    K+ +A  I T+ HG    E A 
Sbjct: 256 IPDELIASYYRLCSTFSLEEIDAVDEQFKNKTADPYALKRALAVNIVTLYHG----EGAG 311

Query: 321 TAAMECFDMSIHSQHMPT---------ISISKDEVSRGMGLLT-LIVKAGFATSTNEARR 370
            AA   FD       +P          I +S D    GM  L  L+V    A +++EARR
Sbjct: 312 LAAQNQFDAQFKHHEVPDDIPEFSTSLIDVSDD----GMVYLAKLMVDCKLAPTSSEARR 367

Query: 371 HLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            +    +KI+   ++ +   I  +   + G + L FGK++
Sbjct: 368 RIDGGGVKIDGKAVAPKSYNISHERLHA-GTV-LQFGKRS 405


>gi|308234417|ref|ZP_07665154.1| tyrosyl-tRNA synthetase [Atopobium vaginae DSM 15829]
          Length = 404

 Score =  140 bits (353), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 117/400 (29%), Positives = 188/400 (47%), Gaps = 46/400 (11%)

Query: 30  LCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDE 89
           L  Q  +T  +G D T+  LH GH   L  +   Q  GH  + ++G GT++IGDPS RD 
Sbjct: 27  LSRQEPLTVKLGVDPTSPDLHLGHAVPLRKMRQFQDLGHNVVLIIGNGTALIGDPSGRDS 86

Query: 90  SRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL---MLNNETWLCSIKYIDLLREIG- 145
           +R  +  + +++N        +++++      D     +++N  WL   K +DL + +G 
Sbjct: 87  TRPPLTEEAVEKNA-------ATYVEQAMKILDPQKTKIVHNGEWL---KPLDLSKMLGL 136

Query: 146 -SFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWG 204
            S F+V R+L  E   +R    QS+S  EF Y +LQAYD V +  +    ++MGG+DQ  
Sbjct: 137 MSKFNVARILEREDFHNRYTNNQSISLHEFIYPVLQAYDSVVVHAD----VEMGGNDQIF 192

Query: 205 NIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
           N++ G DL          ALT PLL    GT KM K+    + L     S  + +    +
Sbjct: 193 NLLAGRDLMRAEGMEPQVALTMPLLVGTDGTKKMSKSYGNYVGLTD---SADDMFGKLMS 249

Query: 264 IDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKIIATEITTMVHGREEAEKAA 320
           I D  + S+ +  +T  + EID +    K +  +    K+ +A  I T+ HG    E A 
Sbjct: 250 IPDELIASYYRLCSTFSLEEIDAVDEQFKNKTADPYALKRALAVNIVTLYHG----EGAG 305

Query: 321 TAAMECFDMSIHSQHMPT---------ISISKDEVSRGMGLLT-LIVKAGFATSTNEARR 370
            AA   FD       +P          I +S D    GM  L  L+V    A +++EARR
Sbjct: 306 LAAQNQFDAQFKHHEVPDDIPEFSTSLIDVSDD----GMVYLAKLMVDCKLAPTSSEARR 361

Query: 371 HLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            +    +KI+   ++ +   I  +   + G + L FGK++
Sbjct: 362 RIDGGGVKIDGKAVAPKSYNISHERLHA-GTV-LQFGKRS 399


>gi|113474316|ref|YP_720377.1| tyrosyl-tRNA synthetase [Trichodesmium erythraeum IMS101]
 gi|110165364|gb|ABG49904.1| tyrosyl-tRNA synthetase [Trichodesmium erythraeum IMS101]
          Length = 405

 Score =  140 bits (352), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 102/380 (26%), Positives = 187/380 (49%), Gaps = 31/380 (8%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D T   +H GH   +  L   Q  GH  + ++G  T+ +GDP+ + E+RR +  +++
Sbjct: 45  LGIDPTGVDVHLGHSIPVRKLRAFQDAGHTAVLIIGDFTARVGDPTGKSEARRQLTPEQV 104

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           QEN +         + + T     +  N+E WL  +   D+L E+ +  +V +ML+ E  
Sbjct: 105 QENAKTYLDQVRPILDFDTPGRLEIRYNSE-WLSKLDLADIL-ELLATMTVGQMLAKEGF 162

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R ++E  +   EF Y ++Q YD V +    D  +++GG+DQ  NI  G DL       
Sbjct: 163 ALRYQQENPIYIHEFLYPLMQGYDSVAV----DADVELGGTDQKFNIAVGRDLQRHFGKR 218

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
             F L  P+L    G  KM K+L   + L+++   P + +     I D  V ++ + LT 
Sbjct: 219 TQFGLLMPILLGTDGVQKMSKSLGNYVGLSED---PLSMYSKLEKIPDDQVENYFELLTN 275

Query: 279 LPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECF---DMSIHSQH 335
           L +++ID+  +       E +K++A +I +  H +E A +A   A++     DMS  ++ 
Sbjct: 276 LNINDIDKNPR-------ERQKLLALDIVSQYHSQEAALEAQQTAVKMVIKGDMS-QTEA 327

Query: 336 MPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           +P  S++  E      L  ++  +G   S++EAR+ +   A+++++  IS++   +    
Sbjct: 328 VPEFSLASVEFP--AKLFYVVSASGLCKSSSEARKKIAGGAVRLDDERISDQNFTL---- 381

Query: 396 FDSTGNIK---LSFGKKNHI 412
            DS  ++    L  GKKN +
Sbjct: 382 -DSPADLDGKVLRVGKKNFV 400


>gi|226948471|ref|YP_002803562.1| tyrosine--tRNA ligase [Clostridium botulinum A2 str. Kyoto]
 gi|226843127|gb|ACO85793.1| tyrosine--tRNA ligase [Clostridium botulinum A2 str. Kyoto]
          Length = 400

 Score =  139 bits (351), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 114/381 (29%), Positives = 187/381 (49%), Gaps = 28/381 (7%)

Query: 36  VTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMR 95
           +T  +G D TA  +H GH   L  +  LQ  GH+ + ++G  T  IGDP+ + ++R+ + 
Sbjct: 38  LTVKLGLDPTAPDIHIGHSVVLRKIRQLQDLGHRAVIIIGDFTGRIGDPTGKSKTRKPLT 97

Query: 96  SQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLS 155
            +E+  N +  +      I     KTD L  N+E WL  +   D + E+ S ++V RML 
Sbjct: 98  QEEVMFNAKTYEEQIFKII--DKDKTD-LKFNSE-WLGKLSLRDTI-ELTSKYTVARMLE 152

Query: 156 FESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER 215
            E  + R +   S+   EF Y +LQA+D V L    +  +++GG+DQ  N++ G  + + 
Sbjct: 153 REDFKKRFESHSSIGIHEFFYPLLQAFDSVSL----NADIELGGTDQRFNLLMGRTIQKD 208

Query: 216 LKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAK 274
                  A+  PLL    G  KM K+L   I +N++    Y       +I D  +V   +
Sbjct: 209 FDQESQVAILMPLLEGTDGKDKMSKSLGNYIGINEDANDIYG---KVMSIPDGMIVKHYE 265

Query: 275 RLTTLPMSEIDRM-AKLQGKEIN--EAKKIIATEITTMVHGREEAEKAATAAMECFDMSI 331
             T +   E+ ++  +L+ + +N  + K  +A EI  + HG E + KA       F    
Sbjct: 266 LATDIHPDEVAKIKTRLEEENVNPRDIKMELAKEIVRLYHGEEASVKAEVNFKNIFQQGN 325

Query: 332 HSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
             + + TI ++  E +    ++ LIVKA FA S NEARR +K  A+KIN   + +E+ ++
Sbjct: 326 IPEDIDTIKVNLTETN----IVDLIVKAKFAPSKNEARRLVKQGAVKINGEKV-DEECKV 380

Query: 392 KLQDFDSTGNIKLSFGKKNHI 412
           K +D        L  GKK  I
Sbjct: 381 KNEDI-------LQVGKKKFI 394


>gi|67522505|ref|XP_659313.1| hypothetical protein AN1709.2 [Aspergillus nidulans FGSC A4]
 gi|40745673|gb|EAA64829.1| hypothetical protein AN1709.2 [Aspergillus nidulans FGSC A4]
 gi|259487050|tpe|CBF85411.1| TPA: tyrosyl-tRNA synthetase, mitochondrial precursor
           (tyrosine--tRNA ligase) (tyrrs) (AFU_orthologue;
           AFUA_4G08320) [Aspergillus nidulans FGSC A4]
          Length = 427

 Score =  139 bits (351), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 73/222 (32%), Positives = 126/222 (56%), Gaps = 22/222 (9%)

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           + NN  W      +++LR++G++  +  ML  ++V++R++R   +SF EF Y ++QA+D+
Sbjct: 34  LTNNNVWWNKTPLLEVLRDLGAYIRIGPMLGRDTVKNRMERGDGMSFAEFTYPLMQAWDW 93

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGI-----------------DLGERLKTPKLFALTSP 227
             L KN  C++Q+GGSDQ+GNI+ G+                  L + L  P     T+P
Sbjct: 94  WMLFKN-GCQVQVGGSDQYGNILFGVGAVKTISKNTVLQEDNNPLSDDLDKP--IGFTTP 150

Query: 228 LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM 287
           LLTT+SG K GK+   AIWL+K+MTS +  +Q++    D  V  + K  T LP+ EI ++
Sbjct: 151 LLTTSSGEKFGKSAGNAIWLDKDMTSTFELYQFFVRTPDDAVERYLKMFTFLPIPEISKI 210

Query: 288 AKLQGKEINE--AKKIIATEITTMVHGREEAEKAATAAMECF 327
            + Q ++ +   A+  +A E   ++HG++EA+  +    + F
Sbjct: 211 MEEQNQDPSRRVAQHALAYEFVELIHGKDEADAVSMQHRQLF 252


>gi|327399025|ref|YP_004339894.1| Tyrosyl-tRNA synthetase [Hippea maritima DSM 10411]
 gi|327181654|gb|AEA33835.1| Tyrosyl-tRNA synthetase [Hippea maritima DSM 10411]
          Length = 406

 Score =  139 bits (351), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 109/366 (29%), Positives = 186/366 (50%), Gaps = 38/366 (10%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   +  L   Q  GH+   L+G  T +IGDP+ + E+R+ +  +E++
Sbjct: 46  GFDPTAPDLHLGHTVLIQKLKQFQDLGHEVYFLIGDFTGMIGDPTGKSETRKALSKEEVE 105

Query: 101 ENIEKIKG-IFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           +N +  K  IF    K  T      ++ N  W   +  +D+++ + S  +V RML  +  
Sbjct: 106 KNAQTYKDQIFKILDKDKTK-----VVYNSQWCSKLNAVDMIK-LASTMTVARMLERDDF 159

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL----GER 215
             R    + +S  EF Y +LQ YD V L    +  +++GG+DQ  N++ G  L    G+R
Sbjct: 160 SKRFSSNKPISIHEFLYPLLQGYDSVAL----EADVELGGTDQKFNLLVGRHLQKLQGQR 215

Query: 216 LKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAK 274
            +T     +  P+L    G  KM K+L   + +  E   P + +    +I D  +  + +
Sbjct: 216 PQT----VIMMPILEGLDGVQKMSKSLGNYVGITDE---PNDMYGKIMSISDELMWRYYE 268

Query: 275 RLTTLPMSEIDRM------AKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFD 328
            L+   +SEI++M       KL  K   +AK+++A EIT   HG E+A++AA    E F 
Sbjct: 269 LLSDRDLSEINQMKENVETGKLHPK---KAKEMLAFEITKRFHGEEKAKEAAKFFEEMFK 325

Query: 329 MSIHSQHMPTIS--ISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISN 386
                  +  I+  +  DEV     +  L+   GF  S++EARR +KSNA+ I+++ +++
Sbjct: 326 KKEIPDEIEEIALQLEDDEV----WICHLLKNIGFVKSSSEARRMIKSNAVSIDSNKVTD 381

Query: 387 EKLQIK 392
           + L++K
Sbjct: 382 DSLKLK 387


>gi|312143797|ref|YP_003995243.1| tyrosyl-tRNA synthetase [Halanaerobium sp. 'sapolanicus']
 gi|311904448|gb|ADQ14889.1| tyrosyl-tRNA synthetase [Halanaerobium sp. 'sapolanicus']
          Length = 426

 Score =  139 bits (351), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 97/361 (26%), Positives = 174/361 (48%), Gaps = 17/361 (4%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  L   Q  GH+   ++G  T +IGDP+ + E+R+ +  +E+
Sbjct: 61  LGLDPTAPDIHLGHTVVLRKLKQFQDLGHQVYLIIGDFTGMIGDPTGKSETRKQLTKEEV 120

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           +EN    +  FS  +     K    ++ N  WL  +K+ D+L E+ + ++V RML  +  
Sbjct: 121 RENALTYQEQFSKVLDRDKTK----LVYNSDWLSEMKFSDVL-ELSAQYTVARMLERDDF 175

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R K  + +   EF Y ++Q YD V +    +  +++GG+DQ  N++ G +L +     
Sbjct: 176 SKRYKAGKPIGIHEFFYPLMQGYDSVAI----EADVELGGTDQRFNLLVGRNLQKEYGQD 231

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               +T PLL    G  KM K+L   I +      P + +    ++ D  +  + + LT 
Sbjct: 232 SQVIITMPLLEGLDGVNKMSKSLDNYIGV---YDKPADMYGKVMSMPDELIARYYELLTD 288

Query: 279 LPMSEIDRM-AKLQGKEIN--EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQH 335
           + + +++ + AKL   + N  + KK +A E+    H  E A+ AA      F        
Sbjct: 289 ISIEQLNEIKAKLNRDDFNPMQLKKELAAELVREYHDEEAAQYAAQEFENVFSQGNLPDD 348

Query: 336 MPTISISKDEVSRG-MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
           +P + I K E+  G + ++ ++   G   S +EARR +K  A+ I+        L ++++
Sbjct: 349 IPEVKIEKSELDEGELWIVKIVAATGLVDSNSEARRMIKQGAVTIDGEKYDKINLDLEVK 408

Query: 395 D 395
           D
Sbjct: 409 D 409


>gi|303232935|ref|ZP_07319616.1| tyrosine--tRNA ligase [Atopobium vaginae PB189-T1-4]
 gi|302480933|gb|EFL44012.1| tyrosine--tRNA ligase [Atopobium vaginae PB189-T1-4]
          Length = 451

 Score =  139 bits (351), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 112/381 (29%), Positives = 179/381 (46%), Gaps = 20/381 (5%)

Query: 36  VTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMR 95
           +T  +G D T+  LH GH   L  +   Q  GH+ + ++G GT++IGDPS RD +R  + 
Sbjct: 80  LTIKLGVDPTSPDLHLGHAVPLRKMRQFQDLGHRVVLIIGNGTALIGDPSGRDSTRPPLT 139

Query: 96  SQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLS 155
            ++++ N +    +  +       KT   +++N  WL  +    +L  I S F+V R+L 
Sbjct: 140 EEQVETNAQTY--VAQAMKILDPEKTS--IVHNGDWLKPLDLAHML-SIMSKFNVARILE 194

Query: 156 FESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER 215
            E    R   EQS+S  EF Y +LQAYD V ++ +    L+MGG+DQ  N++ G DL   
Sbjct: 195 REDFHKRYTNEQSISLHEFIYPVLQAYDSVVVSAD----LEMGGNDQIFNLLAGRDLMRA 250

Query: 216 LKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAK 274
                  ALT PLL    G+ KM K+    + L  E   P + +    +I D  + S+ +
Sbjct: 251 EGMEPQVALTMPLLVGIDGSKKMSKSYGNYVGLTDE---PNDMFGKLMSIPDELIASYYR 307

Query: 275 RLTTLPMSEIDRM-AKLQGKEIN--EAKKIIATEITTMVHGREEAEKAATAAMECFDMSI 331
             +T  + EID +  + +    N  E K+ +A  I  + HG      A  A    F    
Sbjct: 308 LCSTFSIDEIDAVDQQFKDNTANPYELKRKLAVNIVDLYHGAGAGAAAQDAFDATFKHGD 367

Query: 332 HSQHMPTISIS--KDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKL 389
             + +P  S+S  ++     + L  L+V    A ST EARR +    +KIN   +  +  
Sbjct: 368 IPEDIPEFSLSCVQENDEHMVYLAKLLVDVKLAPSTGEARRRIDGGGVKINGVAVKPKCY 427

Query: 390 QIKLQDFDSTGNIKLSFGKKN 410
            +    F  T    + FGK++
Sbjct: 428 NLPADTF--TSGCVMQFGKRS 446


>gi|56964522|ref|YP_176253.1| tyrosyl-tRNA synthetase [Bacillus clausii KSM-K16]
 gi|81365679|sp|Q5WEB8|SYY_BACSK RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|56910765|dbj|BAD65292.1| tyrosyl-tRNA synthetase 2 [Bacillus clausii KSM-K16]
          Length = 414

 Score =  139 bits (350), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 106/375 (28%), Positives = 183/375 (48%), Gaps = 24/375 (6%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D +A  +H GH   L  L   Q+ GH    L+G  T  IGDP+ + E+R+++  +++
Sbjct: 53  LGMDPSAPDVHIGHTVVLQKLRQFQEYGHHIQLLIGDFTGKIGDPTGKSETRKVLTDEQV 112

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           ++N +     +   +     KT+  +L N  WL  +K+ D+L+  G   +V RML  E  
Sbjct: 113 KQNAQTYVEQYGKILD--IEKTE--ILYNSRWLSELKFDDVLKLAGQ-MTVARMLEREDF 167

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R K  Q +S  EF Y ++Q YD V +    +  +++GG+DQ  N++ G  L E     
Sbjct: 168 SKRYKTGQPISVHEFFYPLMQGYDSVAM----ETDIEVGGTDQTFNLLMGRQLQEAYGKE 223

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
           K   LT PL+    G  KM K+L+  I +++   +P   +    +I D  +V + K  T 
Sbjct: 224 KQVMLTLPLIEGLDGVRKMSKSLNNYIGIDE---APNEIFGKAMSIPDELMVKYYKLATD 280

Query: 279 LPMSEIDRMAK-LQGKEIN--EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQH 335
           +PM EI+ + K L    ++  +AK  +  +   M HG+E A++A       F      + 
Sbjct: 281 VPMDEIEALEKGLADGSVHPRDAKMRLGHKFVEMYHGKEAADEAEQYFKTVFQKRALPED 340

Query: 336 MPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           +P  S   D   + + L+ L+V     +S  EARR ++   +KIN   I++    + ++D
Sbjct: 341 IPVFSWEGD---KEVPLIDLLVTLNMQSSKGEARRMIQGGGVKINEQKITDIHTVVSVED 397

Query: 396 FDSTGNIKLSFGKKN 410
                N+ +  GK+ 
Sbjct: 398 -----NMIVQVGKRK 407


>gi|148379187|ref|YP_001253728.1| tyrosyl-tRNA synthetase [Clostridium botulinum A str. ATCC 3502]
 gi|153933038|ref|YP_001383564.1| tyrosyl-tRNA synthetase [Clostridium botulinum A str. ATCC 19397]
 gi|153936237|ref|YP_001387113.1| tyrosyl-tRNA synthetase [Clostridium botulinum A str. Hall]
 gi|148288671|emb|CAL82752.1| tyrosyl-tRNA synthetase [Clostridium botulinum A str. ATCC 3502]
 gi|152929082|gb|ABS34582.1| tyrosyl-tRNA synthetase [Clostridium botulinum A str. ATCC 19397]
 gi|152932151|gb|ABS37650.1| tyrosine--tRNA ligase [Clostridium botulinum A str. Hall]
          Length = 400

 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 114/381 (29%), Positives = 187/381 (49%), Gaps = 28/381 (7%)

Query: 36  VTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMR 95
           +T  +G D TA  +H GH   L  +  LQ  GH+ + ++G  T  IGDP+ + ++R+ + 
Sbjct: 38  MTVKLGLDPTAPDIHIGHSVVLRKIRQLQDLGHRAVIIIGDFTGRIGDPTGKSKTRKPLT 97

Query: 96  SQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLS 155
             E+  N +  +      I     KTD L  N+E WL  +   D + E+ S ++V RML 
Sbjct: 98  QDEVMFNAKTYEEQIFKII--DKDKTD-LKFNSE-WLGKLSLRDTI-ELTSKYTVARMLE 152

Query: 156 FESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER 215
            E  + R +   S+   EF Y +LQA+D V L  +    +++GG+DQ  N++ G  + + 
Sbjct: 153 REDFKKRFESHSSIGIHEFFYPLLQAFDSVSLKAD----IELGGTDQRFNLLMGRTIQKD 208

Query: 216 LKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAK 274
                  A+  PLL    G  KM K+L   I +N++    Y       +I D  +V + +
Sbjct: 209 FDQESQVAILMPLLEGTDGKDKMSKSLGNYIGINEDANDIYG---KVMSIPDGMIVKYYE 265

Query: 275 RLTTLPMSEIDRM-AKLQGKEIN--EAKKIIATEITTMVHGREEAEKAATAAMECFDMSI 331
             T +   E+ ++ A+L  +++N  + K  +A EI  + HG E + KA       F    
Sbjct: 266 LATDIHPDEVAKIKARLGEEKVNPRDIKMELAKEIVRLYHGEEASVKAEVNFKNIFQQGN 325

Query: 332 HSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
             + +  I ++  E +    ++ LIVKA FA S NEARR +K  A+KIN   + +E+ ++
Sbjct: 326 IPEDIDIIKVNLTETN----IVDLIVKAKFAPSKNEARRLVKQGAVKINGEKV-DEECKV 380

Query: 392 KLQDFDSTGNIKLSFGKKNHI 412
           K +D        L  GKK  I
Sbjct: 381 KNEDI-------LQVGKKKFI 394


>gi|299136282|ref|ZP_07029466.1| tyrosyl-tRNA synthetase [Acidobacterium sp. MP5ACTX8]
 gi|298602406|gb|EFI58560.1| tyrosyl-tRNA synthetase [Acidobacterium sp. MP5ACTX8]
          Length = 430

 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 118/394 (29%), Positives = 182/394 (46%), Gaps = 51/394 (12%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   +  L   Q+ GH  I L+G  T++IGDP+ ++++R+ +  +EI 
Sbjct: 57  GFDPTAPDLHLGHTVLMRKLRHFQQLGHTVIFLIGDSTALIGDPTGKNQTRKPLTREEID 116

Query: 101 ENIEKIKG-IFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
            N E  K  +F    +  T      +  N  WL  + Y  +++ + + F+V++ML  E  
Sbjct: 117 VNAETYKDQVFKILDREKTE-----VRYNSEWLDKLGYAGMVK-LAAKFTVSQMLEREDF 170

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R + EQ +   E  Y + Q YD V L    +C +++GG+DQ  N++ G DL       
Sbjct: 171 HKRFQEEQPIHVHELLYPMAQGYDSVAL----ECDVELGGTDQKFNLMRGRDLQRDAGQK 226

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYN---------FWQYWRNIDDADV 269
               L +P+L    G  KM K+L  AI +       Y           W+YW        
Sbjct: 227 PQIILMTPILEGLDGVQKMSKSLGNAIGIKDPAPEMYGKLMSINDELMWRYW-------- 278

Query: 270 VSFAKRLTTLPMSEIDRMAK-LQGKEIN--EAKKIIATEITTMVHGREEAEKAATAAMEC 326
            +F   LT LP S+ID M + ++  E++  +AKK +A  IT   H   EA+ AA +    
Sbjct: 279 -TF---LTDLPQSQIDAMRESVEKGELHPMQAKKNLAHAITADFHTATEADTAAESWATQ 334

Query: 327 FDMSIHSQHMPTISISKD---------EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAI 377
           F     S+ +P +++S           E +  + +  L+  AG A S  EA R L  NA+
Sbjct: 335 FQQKGVSEDVPEVAVSLSAEGLHASSVEGTSELRIAKLLQLAGLAASAGEATRKLGENAV 394

Query: 378 KINNSIISNEKLQIKLQDFDSTGNIK-LSFGKKN 410
            IN      EK   K    +S G    L  GKK+
Sbjct: 395 SIN-----GEKFNGKTLSKESLGEAPTLRLGKKS 423


>gi|309365610|emb|CAR98450.1| CBR-YARS-1 protein [Caenorhabditis briggsae AF16]
          Length = 455

 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 102/324 (31%), Positives = 170/324 (52%), Gaps = 28/324 (8%)

Query: 39  YIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQE 98
           Y G+D TA SLH G+L  L+ L   Q+ G +PI+L+G  T+ IGDPS +   R ++ S  
Sbjct: 60  YAGFDPTAESLHVGNLLILLNLIRSQQFGLRPIALIGEFTASIGDPSGKKSERDLLPSDV 119

Query: 99  IQEN----IEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRML 154
           I  N     E+++ IF++     +     +++NN  WL      D  RE  S   + +ML
Sbjct: 120 IVSNAQSVTEQVRRIFAN---ASSDTEPPIIVNNNDWLEKAALRDFFRECKS-MQLGKML 175

Query: 155 SFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL-- 212
             +++++RL  E+ LS+ EF+Y  +QAYD+  L++ + CR Q+GG DQ G++  G     
Sbjct: 176 RMKTIKNRL--EKGLSYTEFSYQTMQAYDWYTLSEKFGCRFQLGGYDQLGHLDFGAHYIK 233

Query: 213 ---GERLKTPKLFA--LTSPLLTTASGTKMGKTL-SGAIWLNKEMTSPYNFWQYWRNIDD 266
               +   T   FA  +  P+LT ++G K+GK+   GA+WL+ + TSP++ +Q++  + D
Sbjct: 234 KRCNQSQGTDNGFAAGVCFPILTDSAGNKLGKSEGGGALWLDPKKTSPFHLYQFFAQLHD 293

Query: 267 ADVVSFAKRLTTLPMSEID----RMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATA 322
                    L+     +++    +  K  GK I + +  +A EIT +VHG    E+    
Sbjct: 294 DKAEELLLLLSLRNFEDLESSLVKHRKNLGKWIVQTE--LAMEITKVVHG----EEGLDT 347

Query: 323 AMECFDMSIHSQHMPTISISKDEV 346
           A+ C      S+      +SK+EV
Sbjct: 348 ALRCTKAMFGSKKADLTGLSKEEV 371


>gi|237751118|ref|ZP_04581598.1| tyrosyl-tRNA synthetase [Helicobacter bilis ATCC 43879]
 gi|229373563|gb|EEO23954.1| tyrosyl-tRNA synthetase [Helicobacter bilis ATCC 43879]
          Length = 415

 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 110/376 (29%), Positives = 185/376 (49%), Gaps = 31/376 (8%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   L  L   Q  G +   L+G  T+ IGDPS + E+R+ +  +E+ 
Sbjct: 53  GFDPTAPDLHLGHSVLLQKLATFQNYGGRVKFLIGDFTATIGDPSGKSETRKPLTFEEVA 112

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           +N +  +     F      KTD     N  WL S+  ++++ ++ + +SV RM+  +   
Sbjct: 113 QNAKTYEE--QVFKILNKDKTDICF--NSKWLGSLTSVNIM-QLTAQYSVARMMERDDFT 167

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R K  Q +S +EF Y +LQ YD V L    +C +++GG+DQ  N++ G  L       K
Sbjct: 168 KRFKENQPISIVEFMYPLLQGYDSVAL----NCDIELGGNDQKFNLLVGRALQRAYNCGK 223

Query: 221 -LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               +T PLL    G  KM K+L   I +     SP + +    +IDD  +  + + ++T
Sbjct: 224 EQSVMTMPLLEGLDGVNKMSKSLKNYIGVT---DSPNDMYAKILSIDDTLMWRYYELIST 280

Query: 279 LPMSEIDRMAKLQGKEINE-----AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS 333
             ++EI ++ +  G E  E      K+ ++ EITT  H     E  A  A E F+    +
Sbjct: 281 KSLAEIAKLKR--GVETGELHPKAVKEELSLEITTRFHN----ESLAIQAKEAFNAIFSN 334

Query: 334 QHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL 393
           + +P   I   E+ +G  +  ++V+ GF+ ST++ARR +K+ A+ I+ +  ++E      
Sbjct: 335 KEIPK-DIETKEIQKGEWICKVLVELGFSPSTSQARRDIKAGALSIDQAKQTDENFH--- 390

Query: 394 QDFDSTGNIKLSFGKK 409
             F   G   +  GK+
Sbjct: 391 --FLQEGEFIIKLGKR 404


>gi|166362864|ref|YP_001655137.1| tyrosyl-tRNA synthetase [Microcystis aeruginosa NIES-843]
 gi|166085237|dbj|BAF99944.1| tyrosyl tRNA synthetase [Microcystis aeruginosa NIES-843]
          Length = 405

 Score =  138 bits (348), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 104/351 (29%), Positives = 174/351 (49%), Gaps = 23/351 (6%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D T S +H GH      L   Q  GH  + ++G  T+ IGDP+ + E R+ + S+E+
Sbjct: 46  LGIDPTGSDIHLGHSIPFRKLRAFQDAGHVAVVIIGDFTARIGDPTGKSEVRKQLTSEEV 105

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           + N E         + + T     +  N+E WL  +    +L E+ S  +V +ML+ E  
Sbjct: 106 RANAENYLAQLRPILDFNTPNRLEIRYNSE-WLGKLDLSQIL-ELLSTMTVGQMLAKEGF 163

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL-KT 218
             R  +E+ +   EF Y ++Q YD V +    +  +++GG+DQ  NI+ G DL +   KT
Sbjct: 164 SERYDQEKPIFLHEFLYPLMQGYDSVAV----EADVELGGTDQKFNIVVGRDLQKYFGKT 219

Query: 219 PKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT 277
           P+ F L  P+L    G+ KM K+L+  + L +   S Y+  +      DA +  + + LT
Sbjct: 220 PQ-FGLLLPILIGTDGSQKMSKSLNNYVGLRESALSMYSKLE---KTPDALLKDYYELLT 275

Query: 278 TLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECF--DMSIHSQH 335
            LP+   D MA        EA+K +A E+    HG+EEA KA   A E      +  +  
Sbjct: 276 NLPL---DAMA----SNPREAQKQLAIEVVAQFHGKEEALKAQKTAQEIVLQGNTAAAAS 328

Query: 336 MPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISN 386
           +P  S++   V+  + L  L+   G   S+ E RR ++  A++I++  I++
Sbjct: 329 VPEFSLAA--VTFPLKLFYLLSATGLCKSSGEGRRQIQGGAVRIDSEKITD 377


>gi|323702081|ref|ZP_08113749.1| tyrosyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574]
 gi|323532963|gb|EGB22834.1| tyrosyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574]
          Length = 408

 Score =  138 bits (348), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 108/383 (28%), Positives = 184/383 (48%), Gaps = 38/383 (9%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  L   Q+ GHK   ++G  T  IGDP+ + E+R+ +  +++
Sbjct: 42  LGLDPTAPDIHLGHTVVLQKLRQFQELGHKVTIILGDYTGRIGDPTGKSETRKQLTEEQV 101

Query: 100 QENIEKI-KGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
             N +   + IF       T      +  N TWL  +K+ D++R + +  +V RML  E 
Sbjct: 102 LANAKTYEQQIFKILDPQKTS-----VRFNSTWLAPLKFEDVIR-LAATTTVARMLERED 155

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
              R K    +S  EF Y ++Q YD V L    +  +++GG+DQ  N++ G  L +    
Sbjct: 156 FSKRFKENLPISIHEFFYPLMQGYDSVAL----EADIELGGTDQKFNLLMGRTLQKEFGQ 211

Query: 219 PKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT 277
               AL  P+L    G  KM K+L   I +++    P   +    ++ D  +V + + +T
Sbjct: 212 EPQIALMMPILEGLDGVNKMSKSLGNYIGIDE---PPQEMYGKTMSLPDELMVRYFELVT 268

Query: 278 TLPMSEIDRMAK------LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSI 331
            +P+ E+  +AK      L  +++   K  +A EI +  HG E    AA  A E F    
Sbjct: 269 PVPLEEVRSIAKGLAEGTLHPRDV---KMRLAREIVSFYHGPE----AAMQAEEQFKKVF 321

Query: 332 HSQHMP----TISISKDEVSRGMGLLT-LIVKAGFATSTNEARRHLKSNAIKINNSIISN 386
             + +P       +++D    G+ +L  L+ +A  A+ST+EARR +K  A+KI+   +++
Sbjct: 322 QKKELPDEIDQFVVTEDLYEDGLVILPRLMTQAKLASSTSEARRLIKEGAVKIDGEKVTD 381

Query: 387 EKLQIKLQDFDSTGNIKLSFGKK 409
             L+     F  T  + +  GK+
Sbjct: 382 PNLR-----FAPTDGMVIRAGKR 399


>gi|168178623|ref|ZP_02613287.1| tyrosyl-tRNA synthetase [Clostridium botulinum NCTC 2916]
 gi|182670690|gb|EDT82664.1| tyrosyl-tRNA synthetase [Clostridium botulinum NCTC 2916]
          Length = 400

 Score =  138 bits (348), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 112/381 (29%), Positives = 190/381 (49%), Gaps = 28/381 (7%)

Query: 36  VTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMR 95
           +T  +G D TA  +H GH   L  +  LQ  GH+ + ++G  T  IGDP+ + ++R+ + 
Sbjct: 38  MTVKLGLDPTAPDIHIGHSVVLRKIRQLQDLGHRAVIIIGDFTGRIGDPTGKSKTRKPLT 97

Query: 96  SQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLS 155
             E+  N +  +      I     KTD L  N+E WL  +   D + E+ S ++V RML 
Sbjct: 98  QDEVMFNAKTYEEQIFKII--DKDKTD-LKFNSE-WLGKLSLRDTI-ELTSKYTVARMLE 152

Query: 156 FESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER 215
            E  + R +   S+   EF Y +LQA+D V L    +  +++GG+DQ  N++ G  + + 
Sbjct: 153 REDFKKRFESHSSIGIHEFFYPLLQAFDSVSL----NADIELGGTDQRFNLLMGRTIQKD 208

Query: 216 LKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAK 274
                  A+  PLL    G  KM K+L   I +N++     + ++   +I D  +V + +
Sbjct: 209 FDQESQVAILMPLLEGTDGKDKMSKSLGNYIGINEDAN---DIYEKVMSIPDGMMVKYYE 265

Query: 275 RLTTLPMSEIDRM-AKLQGKEIN--EAKKIIATEITTMVHGREEAEKAATAAMECFDMSI 331
             T +   E+ ++ A+L+ + +N  + K  +A EI  + H +E + KA       F    
Sbjct: 266 LATDIHPDEVAKIKARLEEENVNPRDIKMELAKEIVRLYHEKEASIKAEANFKNIFQQGN 325

Query: 332 HSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
             + + TI ++  E +    ++ LIVKA FA S NEARR +K  A+KI+   + +E+ ++
Sbjct: 326 IPEDIDTIKVNLTETN----IVDLIVKAKFAPSKNEARRLVKQGAVKIDGEKV-DEECKV 380

Query: 392 KLQDFDSTGNIKLSFGKKNHI 412
           K +D        L  GKK  I
Sbjct: 381 KNEDI-------LQVGKKKFI 394


>gi|300113478|ref|YP_003760053.1| tyrosyl-tRNA synthetase [Nitrosococcus watsonii C-113]
 gi|299539415|gb|ADJ27732.1| tyrosyl-tRNA synthetase [Nitrosococcus watsonii C-113]
          Length = 406

 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 105/354 (29%), Positives = 174/354 (49%), Gaps = 17/354 (4%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   L  L   Q+ GH+ + L+G  T +IGDPS ++ +R+ +   +I 
Sbjct: 39  GFDPTAPELHLGHTVLLNKLRQFQELGHEVLFLIGDFTGMIGDPSGKNVTRQPLTRDKIL 98

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           EN    +     F      KT  +   N +W+  +   DL+R + S ++V RML  +   
Sbjct: 99  ENARTYEE--QIFRVLDPEKTQVVF--NSSWMSGMTAADLVR-LSSHYTVARMLERDDFY 153

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R + ++ ++  EF Y +LQ YD V L  +    +++GG+DQ  N++ G DL +     +
Sbjct: 154 KRYQGKRPIAIHEFLYPLLQGYDSVALKAD----VELGGTDQKFNLLVGRDLQKVYGQDQ 209

Query: 221 LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTL 279
              +T P+L    G  KM K+L   I +++    P   +    +I D  +  + + L++ 
Sbjct: 210 QIIITMPILEGLDGVQKMSKSLGNYIGISE---PPREIFGKLMSISDDLMWRYLELLSSR 266

Query: 280 PMSEIDRMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMP 337
           PMSEI R  K   QG    + K  +A EI    H    AE+A  A +  F   +  + +P
Sbjct: 267 PMSEISRWKKEVEQGANPRDIKVKLAKEIVARFHDDSMAEQAHEAFVAQFRRGVMPEDIP 326

Query: 338 TISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
            I I       G+ +  L+ ++   TST+EA R +K  A++I+   + N+ L I
Sbjct: 327 EIPIVAGR--EGIAIARLLKESALTTSTSEALRLIKQGAVRIDGQRLGNQSLHI 378


>gi|322380907|ref|ZP_08054985.1| tyrosyl-tRNA synthetase [Helicobacter suis HS5]
 gi|321146675|gb|EFX41497.1| tyrosyl-tRNA synthetase [Helicobacter suis HS5]
          Length = 401

 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 120/384 (31%), Positives = 190/384 (49%), Gaps = 35/384 (9%)

Query: 37  TAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRS 96
           +A  G+D TA  LH GH+  L  L  LQ+ G +   ++G  T+ IGDPS + E+R+++  
Sbjct: 40  SAKAGFDPTAPDLHLGHMVLLNKLATLQRHGARVQFVIGDFTATIGDPSGKSETRKILSF 99

Query: 97  QEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSF 156
           +E+ EN +  K     F       TD     N  WL  +    LL  + S FSV RML  
Sbjct: 100 EEVLENAKTYKE--QVFKILDPDLTDVCF--NSAWLKPLGAEGLLV-LTSKFSVARMLER 154

Query: 157 ESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL 216
           +    R K  + +S +EF Y +LQ YD V L    +C +++GG+DQ  N++ G  L    
Sbjct: 155 DDFEKRYKENKPISVVEFMYPLLQGYDSVAL----ECDIELGGNDQKFNLLVGRFLQRSY 210

Query: 217 KTPK-LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAK 274
              K    LT PLL    G  KM K+L   I ++++   P N +    +I D  +  + +
Sbjct: 211 GLSKEQSVLTMPLLEGLDGVHKMSKSLGNYIGVSED---PKNMYAKLLSISDDLMWRYYE 267

Query: 275 RLTTLPMSEIDRM------AKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFD 328
            L+     +I  +       KL  K I E    +A EITT +H  ++A++A       FD
Sbjct: 268 LLSAQTSQQIALLKQGVQEGKLHPKTIKEE---LALEITTRLHSLKQAQEAKAE----FD 320

Query: 329 MSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEK 388
              H Q +P+  + + + S G+ + TL+  AG + ST++ARR +K+  ++IN  +I +E+
Sbjct: 321 RISHKQ-IPS-ELVQMQFSEGVWIGTLLKSAGLSPSTSQARRDIKAGGVRINQVVILDEQ 378

Query: 389 LQIKLQDFDSTGNIKLSFGKKNHI 412
            Q       S G+  +  GK+  I
Sbjct: 379 YQF------SKGSYVVQVGKRKFI 396


>gi|167629889|ref|YP_001680388.1| tyrosyl-tRNA synthetase [Heliobacterium modesticaldum Ice1]
 gi|167592629|gb|ABZ84377.1| tyrosyl-tRNA synthetase [Heliobacterium modesticaldum Ice1]
          Length = 417

 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 101/364 (27%), Positives = 171/364 (46%), Gaps = 17/364 (4%)

Query: 28  DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFR 87
           D + ++  +   +G D TA  +H GH   L  L   Q  GH+ + ++G  T  +GDPS +
Sbjct: 41  DAIVNRRPLRVKLGLDPTAPDIHLGHTVVLRKLRDFQDLGHQVVIVIGDFTGRVGDPSGK 100

Query: 88  DESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSF 147
            E+R+ +  +E+  N    K     F      KT+  M  N  WL  + + D+L ++ + 
Sbjct: 101 SETRKQLTEEEVNRNAATYKE--QIFKVLDPAKTE--MTFNSHWLQPLNFADIL-QLAAK 155

Query: 148 FSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNII 207
           ++V RML  +    R++    +   E  Y ++Q YD V L  +    +++GG+DQ  N++
Sbjct: 156 YTVARMLERDDFSKRMRENLPIGVHELFYPLMQGYDSVALRAD----VELGGTDQKFNLL 211

Query: 208 CGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDD 266
            G  L +        AL  P+L    G  KM K+L   I +N+   SP   +    +I D
Sbjct: 212 VGRVLQKEYGQEPQVALMMPILEGLDGVNKMSKSLGNYIGVNE---SPREIYGKTMSIAD 268

Query: 267 ADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKIIATEITTMVHGREEAEKAATAA 323
           A +V + + +T +   EI  +A   K       +AK  +A EI  + HG E A+ A    
Sbjct: 269 ALMVRYFELVTRVSAEEIQSIAEGLKSGALHPRDAKMRLAREIVALFHGNEAAQAAQDEF 328

Query: 324 MECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTNEARRHLKSNAIKINNS 382
           +  F        +P   +  + +  G +GL+  +V +G A S  EARR +   A+K++N 
Sbjct: 329 INIFQKRELPDEIPDFIVPAEHIQDGKVGLVKALVLSGLAASNGEARRKITEGAVKVDNE 388

Query: 383 IISN 386
            I +
Sbjct: 389 TIKD 392


>gi|188586426|ref|YP_001917971.1| tyrosyl-tRNA synthetase [Natranaerobius thermophilus JW/NM-WN-LF]
 gi|179351113|gb|ACB85383.1| tyrosyl-tRNA synthetase [Natranaerobius thermophilus JW/NM-WN-LF]
          Length = 412

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 115/363 (31%), Positives = 187/363 (51%), Gaps = 23/363 (6%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D +A  +H GH   L  L  +Q+ GH    ++G  T  IGDP+ R E+R+ M ++EI
Sbjct: 46  LGLDPSAPDIHLGHTVVLRKLKQIQEMGHNVTIIIGDFTGKIGDPTGRSETRKQMTTEEI 105

Query: 100 QENIEKIK-GIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
            EN E  K  IF   I Y + KTD     N  WL ++K+ D++ E+ S  +V RML  E 
Sbjct: 106 LENAETYKEQIFK--ILY-SDKTDVRF--NSEWLSNLKFEDII-ELSSKVTVARMLERED 159

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL-GERLK 217
              R K+ + +S  EF Y I+Q YD V L    D  ++ G ++Q  N++ G  L  E+  
Sbjct: 160 FNWRYKKNRPISLHEFFYPIMQGYDSVFL----DSDVEFGATEQKFNLLMGRQLQKEKGN 215

Query: 218 TPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRL 276
           TP++ AL  P+L    G  KM K+L   I + ++   PY+ +    +I D  ++ +    
Sbjct: 216 TPQI-ALMLPILVGTDGEKKMSKSLGNYIGIEEK---PYDMYGKTMSIPDELIIDYFTLT 271

Query: 277 TTLPMSEIDRMAKL--QGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQ 334
           T L   E+D + K   +GK   + K  +A EI T+ HG+EEAEKA    ++ F      +
Sbjct: 272 TDLLPEEVDEIEKALNEGKNPRDIKMKLAREIVTLYHGKEEAEKAEQEFLKVFQQRQLPE 331

Query: 335 HMPTIS---ISKDEVSR-GMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQ 390
            +P  S   I KD      + ++ L+      +S +E RR +K  A+K+    ++++  +
Sbjct: 332 DIPEYSLETIKKDMTDEHKIPIVKLLQNCELVSSNSEGRRMVKQGAVKLEGEKVTDKNAE 391

Query: 391 IKL 393
           +++
Sbjct: 392 VEI 394


>gi|221488404|gb|EEE26618.1| tyrosyl-tRNA synthetase, putative [Toxoplasma gondii GT1]
          Length = 912

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 116/242 (47%), Gaps = 52/242 (21%)

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV-----------------RSRLKR 165
           A ++ N +WL  +  +D L E G+F S+ R+LS  SV                 RS  + 
Sbjct: 380 AAIVENCSWLSGLSSLDFLTEFGAFLSLPRLLSRSSVEETLGPCLFGRGDRSPTRSSSRN 439

Query: 166 EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALT 225
           + + SF    Y +LQA D+  L + +    Q+GG DQWGNI  G++L  R     LF LT
Sbjct: 440 KANFSFASLAYAVLQAVDWCFLRRRFGVVGQVGGRDQWGNISTGLELARRRDNLCLFGLT 499

Query: 226 SPLLTTASGTKMGKTLSGA-------------------------------IWLNKEMTSP 254
           +PLL   +G KMGK+  GA                               +WL K++T P
Sbjct: 500 TPLLLNRAGVKMGKSGGGAGTKGTRREGEGEKAGGGKEGAMHANTPGGKTVWLRKDLTPP 559

Query: 255 YNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK----LQGKEINEAKKIIATEITTMV 310
             FW+YWRN+DDADV    +  T L + EI+ + +         +N  K+++A  +TT+V
Sbjct: 560 VEFWRYWRNVDDADVKRLLRWFTLLSLPEIEALEEDTRHCGAGALNYLKEVLADHVTTLV 619

Query: 311 HG 312
           HG
Sbjct: 620 HG 621


>gi|260582183|ref|ZP_05849977.1| tyrosyl-tRNA synthetase [Haemophilus influenzae NT127]
 gi|260094815|gb|EEW78709.1| tyrosyl-tRNA synthetase [Haemophilus influenzae NT127]
          Length = 395

 Score =  137 bits (346), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 108/381 (28%), Positives = 178/381 (46%), Gaps = 29/381 (7%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           ILSE   I ++   R L +          +G D TA  +H GH   L  L   Q+ GH+ 
Sbjct: 18  ILSEADLIEKLKENRPLKV---------KLGADPTAPDIHLGHTVVLNKLRQFQQLGHEV 68

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
             L+G  T ++GDPS ++ +R  +  +++  N E  K       K    +   ++ N+E 
Sbjct: 69  YFLIGDFTGMVGDPSGKNATRPPLSREDVLRNAETYK---EQIYKILDPQKTKIVFNSE- 124

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           WL  +    ++R + S ++V RML  +  + R    Q ++  EF Y +LQ YD V L   
Sbjct: 125 WLSKLGTEGMIR-LASNYTVARMLERDDFKKRFGNNQPIAIHEFIYPLLQGYDSVAL--- 180

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNK 249
            D  +++GG+DQ  N++ G +L +        A+T PLL    G  KM K+L   I + +
Sbjct: 181 -DADVELGGTDQKFNLLVGRELQKSAGKKPQVAITLPLLVGLDGEKKMSKSLGNYIGVTE 239

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATEIT 307
              +P + +    +I D  + ++   L+  P++EI ++     +GK   + K ++A E+ 
Sbjct: 240 ---APSDMFGKVMSISDELMWNWYNLLSFRPLNEIAQLKSEVEKGKNPRDVKILLAKELI 296

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
              H  E A  A    +  F        MP  + S +     MGL TL+ +AG   ST+E
Sbjct: 297 ARFHNEETANAAEQEFINRFQKGAMPDEMPEFTFSGE-----MGLATLLKEAGLVPSTSE 351

Query: 368 ARRHLKSNAIKINNSIISNEK 388
           A R  +   +KIN   + N K
Sbjct: 352 AIRSAQQGGVKINGEKVDNVK 372


>gi|27262156|gb|AAN87359.1| Tyrosyl-tRNA synthetase [Heliobacillus mobilis]
          Length = 420

 Score =  137 bits (346), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 103/355 (29%), Positives = 171/355 (48%), Gaps = 23/355 (6%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  L   Q  GH+ + ++G  T  +GDPS + E+R+ +  +E+
Sbjct: 53  LGLDPTAPDIHLGHTVVLQKLRHFQDLGHQVVIVIGDFTGRVGDPSGKSETRKQLTEEEV 112

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
             N E  K     F      KT+     N +WL  + + D+L ++ + ++V RML  E  
Sbjct: 113 NRNAETYKT--QIFKVLDPEKTEVTF--NASWLQPLNFADIL-QLAAKYTVARMLEREDF 167

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R++  + +   E  Y ++Q YD V L  +    +++GG+DQ  N++ G  L +     
Sbjct: 168 TKRMQENRPIGMHELFYPLMQGYDSVALKAD----VELGGTDQKFNLLVGRVLQKEYGQE 223

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
              AL  P+L    G  KM K+L   I +N+   SP   +    +I D  +V + + +T 
Sbjct: 224 PQVALMMPILEGLDGVHKMSKSLGNYIGINE---SPREMFGKTMSIADELMVRYFELVTR 280

Query: 279 LPMSEIDRMA------KLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIH 332
           +P  EI  +A       L  ++I   K  +  EI ++ HG E A +A    +  F     
Sbjct: 281 IPSEEIAAIASGLKEGSLHPRDI---KMRLGREIVSLYHGEEAARQAEEEFINIFQKKEL 337

Query: 333 SQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISN 386
              +P   I+ D +  G + L+ ++V AG A S  EARR +   A+K+NN +I +
Sbjct: 338 PDEIPEFVITSDIMENGQVSLIKVLVAAGLAKSNGEARRKIVEGAVKVNNQVIKD 392


>gi|302389946|ref|YP_003825767.1| tyrosyl-tRNA synthetase [Thermosediminibacter oceani DSM 16646]
 gi|302200574|gb|ADL08144.1| tyrosyl-tRNA synthetase [Thermosediminibacter oceani DSM 16646]
          Length = 400

 Score =  137 bits (346), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 111/377 (29%), Positives = 181/377 (48%), Gaps = 26/377 (6%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  +   Q  GH+ I L+G  T +IGDP+ + E+R+ +  +EI
Sbjct: 41  LGLDPTAPDVHLGHAVVLKKMRQFQDLGHEVILLIGDFTGMIGDPTGKSETRKQLSREEI 100

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
            EN    K     F     GKT  +  N+E WL  + + D+L+ + S ++V RML  E  
Sbjct: 101 MENARTYKE--QVFKILDPGKT-RIAFNSE-WLGRMSFEDVLK-LASKYTVARMLEREDF 155

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R K  + +S  EF Y ++Q YD V L    +  +++G ++Q  NI+ G  L +     
Sbjct: 156 SQRFKEGRPISIHEFFYPLMQGYDSVAL----EADVELGATEQKFNILMGRTLQKEYGQE 211

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
              A+  P+L    G  KM K+L   I +++    P   +    +I D  ++ + +  T 
Sbjct: 212 PQVAMLMPILVGIDGKRKMSKSLGNYIGVSE---PPDEMYGKVMSIPDEVMMEYYRLATY 268

Query: 279 LPMSEIDRMAK-LQGKEIN--EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQH 335
           +   EID++ K ++   IN  +AK  +A EI  + HG EEA +A    +  F        
Sbjct: 269 VDPEEIDKIEKGIKEGNINPRDAKMRLAREIVKIYHGDEEALRAEENFVRVFQKKDLPDE 328

Query: 336 MPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           +P   I + +V     L  L+  +G  +S +EA R +K  A+KIN   IS+        D
Sbjct: 329 IPEFKIDEGKV----WLPKLMTLSGLCSSNSEALRMIKQGAVKINGEKISD------AMD 378

Query: 396 FDSTGNIKLSFGKKNHI 412
            + +  + L  GK+  +
Sbjct: 379 LEISSPVVLQVGKRKFV 395


>gi|292491224|ref|YP_003526663.1| tyrosyl-tRNA synthetase [Nitrosococcus halophilus Nc4]
 gi|291579819|gb|ADE14276.1| tyrosyl-tRNA synthetase [Nitrosococcus halophilus Nc4]
          Length = 405

 Score =  137 bits (346), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 110/371 (29%), Positives = 179/371 (48%), Gaps = 20/371 (5%)

Query: 26  ELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDP 84
           EL +   QG  +    G+D TA  LH GH   L  L   QK GH+ + L+G  T +IGDP
Sbjct: 23  ELKLRLEQGKTLRVKAGFDPTAPELHLGHTVLLNKLRQFQKLGHEALFLIGDFTGMIGDP 82

Query: 85  SFRDESRRMMRSQEIQENIEKI-KGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLRE 143
           + ++ +R+ +   E+ EN     + IF       T     L++ N +W+  +   DL+R 
Sbjct: 83  TGKNITRQPLTRDEVLENARTYEEQIFKILDPEKT-----LVVFNSSWMNGMTAADLVR- 136

Query: 144 IGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQW 203
           + S ++V RML  +    R +  Q ++  EF Y +LQ YD V L  +    +++GG+DQ 
Sbjct: 137 LSSHYTVARMLERDDFYKRYQSGQPIAIHEFLYPLLQGYDSVALKAD----VELGGTDQK 192

Query: 204 GNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWR 262
            N++ G DL +         +T P+L    G  KM K+L   I +N+    P   +    
Sbjct: 193 FNLLVGRDLQKVYGQRPQVIITMPILEGLDGVQKMSKSLGNYIGINE---PPREMFGKLM 249

Query: 263 NIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAA 320
           +I D  +  + + L+  PM+EI    K   QG    + K  +A EI    H    AE+A 
Sbjct: 250 SISDELMWRYLELLSFRPMTEIAHWKKEVEQGANPRDIKIKLAKEIVARFHSDGMAEQAH 309

Query: 321 TAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKIN 380
              +  F   +  + +  I IS  +   G+ +  L+ ++   TST+EA R +K  A++I+
Sbjct: 310 EVFVAQFRQGVLPEDISEIPISTGK--EGIPIARLLKESALTTSTSEALRMIKQGAVRID 367

Query: 381 NSIISNEKLQI 391
              I N+ LQ+
Sbjct: 368 GERIENQSLQL 378


>gi|296133365|ref|YP_003640612.1| tyrosyl-tRNA synthetase [Thermincola sp. JR]
 gi|296031943|gb|ADG82711.1| tyrosyl-tRNA synthetase [Thermincola potens JR]
          Length = 407

 Score =  137 bits (345), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 99/361 (27%), Positives = 175/361 (48%), Gaps = 17/361 (4%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  L   Q+ GHK   ++G  T+ IGDP+ + E+R+ +  +E+
Sbjct: 43  LGLDPTAPDIHLGHTVVLQKLRQFQELGHKVTIILGDYTARIGDPTGKSETRKQLTEEEV 102

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           ++N    K     F      KT+ +   N  WL S+ + D++  + + ++V RML  +  
Sbjct: 103 RKNAATYKE--QIFKILDPAKTNVVF--NSQWLASLSFADIIN-LAAKYTVARMLERDDF 157

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R   EQ +S  EF Y ++Q YD V L    +  +++GG+DQ  N++ G  L +     
Sbjct: 158 AKRFANEQPISIHEFFYPLMQGYDSVAL----EADVELGGTDQKFNLLMGRHLQKEYGQE 213

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
              AL  P+L    G  KM K+L   I + +   SP   +    +I D  ++ + + +T 
Sbjct: 214 PQVALMMPILEGLDGVQKMSKSLGNYIGITE---SPREMYGKTMSIADELMIRYFELVTP 270

Query: 279 LPMSE---IDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQH 335
           + ++E   I+   K       + K  +A EI TM HGRE A KA       F        
Sbjct: 271 VSLAEIRDIEEGMKNGALHPRDVKMRLAREIVTMYHGREAALKAEEEFKSIFQKKELPDE 330

Query: 336 MPTISISKDEVSRG-MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
           +P   + K+++  G + L  L+  AG  +S++E RR +    +++N+  + +   +++ +
Sbjct: 331 IPEYVLDKNQLEEGEIWLPKLMALAGLVSSSSEGRRLVIQGGVRVNDKKVVDPAAKVQPE 390

Query: 395 D 395
           +
Sbjct: 391 N 391


>gi|170288258|ref|YP_001738496.1| tyrosyl-tRNA synthetase [Thermotoga sp. RQ2]
 gi|170175761|gb|ACB08813.1| tyrosyl-tRNA synthetase [Thermotoga sp. RQ2]
          Length = 401

 Score =  137 bits (345), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 111/400 (27%), Positives = 187/400 (46%), Gaps = 26/400 (6%)

Query: 15  RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLM 74
           R  +  IS    LD +  +G +   +G D +   LH GH   L  L   Q  GH  + ++
Sbjct: 12  RNVVDLISEEELLDRIKRKGKLRVKLGVDPSRPDLHLGHAVVLRKLREFQDLGHTVVLII 71

Query: 75  GGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCS 134
           G  T+ IGDPS R+E+R M+  +E+ EN +  +    +F      +T+ L  N E WL  
Sbjct: 72  GDFTARIGDPSGRNETRPMLTKEEVLENAKTYQE--QAFKILDPERTE-LRFNGE-WLDR 127

Query: 135 IKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCR 194
           + + D++  + S ++V RML  +    R K    ++  EF Y + QAYD V +  +    
Sbjct: 128 MTFADVIV-LASKYTVARMLERDDFAKRFKEGIPIAVSEFLYPLAQAYDSVAIQAD---- 182

Query: 195 LQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTS 253
           +++GG+DQ  N++ G  + E         +T P++    G  KM K+    I  N     
Sbjct: 183 VELGGTDQLFNLLVGRKIQEEYGQEPQIVMTMPIIEGTDGKLKMSKSYGNYIAFN---DP 239

Query: 254 PYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE-IN--EAKKIIATEITTMV 310
           P   +    +I D  ++ +   LT +P   I+   K   ++ IN  + K ++A EIT   
Sbjct: 240 PEEMYGKLMSIPDELIIKYMHLLTNIPEEVIEEYEKKMKEKTINPRDVKMVLAYEITRFF 299

Query: 311 HGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARR 370
           HG E A+KA    ++ F        MP + IS+D+      ++ L+V+ G A+S +EA+R
Sbjct: 300 HGEENAKKAQEQFVKVFQKKEIPDEMPVVEISQDK-----NIVDLLVEIGAASSKSEAKR 354

Query: 371 HLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            +    + I+   I + K  +     +  G   L  GK+ 
Sbjct: 355 LVSQGGVYIDGERIEDIKFTV-----EPDGERVLRVGKRK 389


>gi|312134760|ref|YP_004002098.1| tyrosyl-tRNA synthetase [Caldicellulosiruptor owensensis OL]
 gi|311774811|gb|ADQ04298.1| tyrosyl-tRNA synthetase [Caldicellulosiruptor owensensis OL]
          Length = 396

 Score =  137 bits (345), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 118/412 (28%), Positives = 204/412 (49%), Gaps = 34/412 (8%)

Query: 3   AFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
            FK     I++E   + ++   R L+I          +G D     +H GH   L  L  
Sbjct: 9   VFKKGAAEIITEEELVEKLKQDRPLNI---------KLGLDPNVPDVHLGHAVVLRKLKQ 59

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD 122
           LQ  GH  I ++G  T++IGDP+ + E+R+ +  +E+Q+N E  K      +K    K  
Sbjct: 60  LQDLGHNIILIIGDFTAMIGDPTGKSETRKQLTKEEVQKNAEPFK---QQVLKILDPKKT 116

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
            +  N+E WL  + ++D++  + S ++V RML  E+ + R+++   LS  EF Y ++Q Y
Sbjct: 117 TVRYNSE-WLEPMNFLDVIN-LASKYTVARMLERETFKQRMEKNLPLSIHEFFYPLMQGY 174

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL--KTPKLFALTSPLLTTASGT-KMGK 239
           D V +    +  +++G ++Q  NI+ G  L +    KT ++ AL  P+L    G  KM K
Sbjct: 175 DSVVI----EADVELGATEQKFNILMGRTLQKEYGCKTIQV-ALLMPILVGTDGVNKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA-KLQGKEIN-- 296
           +L   I +N+    P   +    +I D  ++S+ +  T L   EI+ M  KL+   ++  
Sbjct: 230 SLGNYIGINE---PPNIMYGKVMSIPDEIMISYYELTTDLEPEEIEEMKRKLEEGTLHPR 286

Query: 297 EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLI 356
           +AK  +A EI  + HG E A +A    ++ F       ++P + +   +V     L   +
Sbjct: 287 DAKMRLAREIVKLYHGEEAAIRAEEEFIKVFQKKDIPDNIPEVELQSSKVY----LPRFM 342

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGK 408
           V+    +ST+E  R +KS A+K+N   +++  L I+LQ+ D     KL F K
Sbjct: 343 VENKLCSSTSEGMRLIKSGAVKLNGEKVND--LDIELQNGDVLQVGKLKFVK 392


>gi|312074099|ref|XP_003139818.1| tyrosyl-tRNA synthetase [Loa loa]
 gi|307765019|gb|EFO24253.1| tyrosyl-tRNA synthetase [Loa loa]
          Length = 552

 Score =  137 bits (344), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 114/375 (30%), Positives = 175/375 (46%), Gaps = 59/375 (15%)

Query: 37  TAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRS 96
             Y G+D TA SLH GHL  +  LF     G   I+L+GG T+ +GDPS     R ++  
Sbjct: 197 VVYAGFDPTAESLHIGHLLVITNLFRATLHGCHAIALIGGATAYVGDPSGHVTDRIIVSG 256

Query: 97  QEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSF 156
            EI +                 GK +  ++N      SI+++++ R+    F +  ML  
Sbjct: 257 NEIDQY---------------AGKINLQLMN------SIQFLEVCRD----FRLGDMLRL 291

Query: 157 ESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL 216
             V+SR++    LS  EF Y I Q+YD+  L+++Y+C  Q+GG+DQ G+   G D  ++ 
Sbjct: 292 GMVKSRMRDGSGLSCSEFLYQIFQSYDWYRLSRDYNCHFQIGGNDQLGHFDAGYDYIKK- 350

Query: 217 KTPKLFA-LTSPLLTTASGTKMGKTL--SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFA 273
           KT KL A +  PLLT A G K+ KT      IWL++  TSP+ F+QY           F+
Sbjct: 351 KTGKLSASICLPLLTDAQGKKLSKTSKEGSNIWLDERKTSPFTFYQY-----------FS 399

Query: 274 KRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS 333
            R                GK + + K  +A E+T  VHG    + A   +   F  S+  
Sbjct: 400 LRNVEEIEEIEREHHANLGKWVAQEK--LAEELTKFVHGSNGLKMAKQCSKILFHGSLSE 457

Query: 334 -QHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARR----------HLKSNAIKINNS 382
            + MPT  I   E   G   +  + ++GF+T    A R           +K+ A+K+N +
Sbjct: 458 LRKMPTSLI---EEQFGSASVQQLFRSGFSTMGELADRVHNGEGSSINKMKAGALKLNGT 514

Query: 383 IISNEKLQIKLQDFD 397
             ++     +L DFD
Sbjct: 515 RFTDPD---ELVDFD 526


>gi|322378582|ref|ZP_08053022.1| tyrosyl-tRNA synthetase [Helicobacter suis HS1]
 gi|321148990|gb|EFX43450.1| tyrosyl-tRNA synthetase [Helicobacter suis HS1]
          Length = 401

 Score =  137 bits (344), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 119/384 (30%), Positives = 189/384 (49%), Gaps = 35/384 (9%)

Query: 37  TAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRS 96
           +A  G+D TA  LH GH+  L  L  LQ+ G +   ++G  T+ IGDPS + E+R+++  
Sbjct: 40  SAKAGFDPTAPDLHLGHMVLLNKLATLQRHGARVQFVIGDFTATIGDPSGKSETRKILSF 99

Query: 97  QEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSF 156
           +E+ EN +  K     F       TD     N  WL  +    LL  + S FSV RML  
Sbjct: 100 EEVLENAKTYKE--QVFKILDPDLTDVCF--NSAWLKPLGAEGLLV-LTSKFSVARMLER 154

Query: 157 ESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL 216
           +    R K  + +S +EF Y +LQ YD V L    +C +++GG+DQ  N++ G  L    
Sbjct: 155 DDFEKRYKENKPISVVEFMYPLLQGYDSVAL----ECDIELGGNDQKFNLLVGRFLQRSY 210

Query: 217 KTPK-LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAK 274
              K    LT PLL    G  KM K+L   I ++++   P N +    +I D  +  + +
Sbjct: 211 GLSKEQSVLTMPLLEGLDGVHKMSKSLGNYIGVSED---PKNMYAKLLSISDDLMWRYYE 267

Query: 275 RLTTLPMSEIDRM------AKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFD 328
            L+     +I  +       KL  K I E    +A EI T +H  ++A++A       FD
Sbjct: 268 LLSAQTSQQIALLKQGVQEGKLHPKTIKEE---LALEIITRLHSLKQAQEAKAE----FD 320

Query: 329 MSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEK 388
              H Q +P+  + + + S G+ + TL+  AG + ST++ARR +K+  ++IN  +I +E+
Sbjct: 321 RISHKQ-IPS-ELVQMQFSEGVWIGTLLKSAGLSPSTSQARRDIKAGGVRINQVVILDEQ 378

Query: 389 LQIKLQDFDSTGNIKLSFGKKNHI 412
            Q       S G+  +  GK+  I
Sbjct: 379 YQF------SKGSYVVQVGKRKFI 396


>gi|88813746|ref|ZP_01128966.1| tyrosyl-tRNA synthetase [Nitrococcus mobilis Nb-231]
 gi|88788999|gb|EAR20146.1| tyrosyl-tRNA synthetase [Nitrococcus mobilis Nb-231]
          Length = 427

 Score =  137 bits (344), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 98/354 (27%), Positives = 174/354 (49%), Gaps = 17/354 (4%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   +  L   Q  GH+ + L+G  T +IGDPS +  +R+++   E+ 
Sbjct: 60  GFDPTAPDLHLGHTVLIHKLRQFQDLGHEVLFLIGDFTGMIGDPSGKSATRKVLTRDEVL 119

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
            N    +      ++   G+T  +   N +W+ S+   D++ ++ + ++V RML  +  R
Sbjct: 120 SNARTYEEQIFKILQ--PGRTQVVF--NSSWMDSLSAADMI-QLAAQYTVARMLERDDFR 174

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R    Q+++  EF Y ++Q YD V L  +    +++GG+DQ  N++ G +L +      
Sbjct: 175 QRYLTNQAIAIHEFLYPLVQGYDSVALKAD----IELGGTDQKFNLLVGRELQKAYGQRP 230

Query: 221 LFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTL 279
              +T P+L    G  KM K+L   + + +   +P   +    +I D  +  + + L+  
Sbjct: 231 QVIMTLPILEGLDGIQKMSKSLGNYVGIRE---APDEIFGKLMSISDELMWRYMELLSFR 287

Query: 280 PMSEIDRM--AKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMP 337
              EI+R+  A  QG    + K ++A EI    HGR  A +A    +  F      Q +P
Sbjct: 288 SPREIERLGEAVRQGGNPRDVKYLLAEEIVERFHGRHAATRAREEFIARFQRGATPQELP 347

Query: 338 TISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
            + ++      GM +  L+ +AG  +ST+EA R +K  A++I++  I N  L I
Sbjct: 348 EVMVAAP--GDGMLIGNLLKEAGLVSSTSEAMRLMKQRAVRIDDECIENRALCI 399


>gi|270011290|gb|EFA07738.1| hypothetical protein TcasGA2_TC002218 [Tribolium castaneum]
          Length = 254

 Score =  136 bits (343), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 81/220 (36%), Positives = 122/220 (55%), Gaps = 11/220 (5%)

Query: 4   FKSDFLSILSERGFIHQI---SNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           + S  L  L ERG    I   +    +  L +      Y G+D TA SLH G+L  L+ L
Sbjct: 19  YSSRNLLKLKERGMYQDIFPDTATNTVTDLLNAAPQRVYAGFDPTADSLHIGNLLVLINL 78

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI----EKIKGIFSSFIKY 116
              Q+ GH+PI+L+GG T+ IGDPS +   R  + S  + EN+      I+ +F +  KY
Sbjct: 79  IHWQRGGHQPIALIGGATAKIGDPSGKTSEREKLASAFVDENVIGIRNNIETLFYNHEKY 138

Query: 117 ---GTGKTDALML-NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFL 172
                GK   L++ NNE+W   +  IDL+   G +  +  +LS  SV++RL+    +SF 
Sbjct: 139 LWKKKGKLAPLIIVNNESWYSKMSPIDLIGGAGRYLRMGTLLSRTSVQTRLQSPAGMSFT 198

Query: 173 EFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL 212
           EF+Y + QAYD++ L + Y+C  Q+GG+DQ GNI+ G +L
Sbjct: 199 EFSYQLFQAYDWLHLFQKYNCSFQIGGNDQMGNIMSGHEL 238


>gi|312622823|ref|YP_004024436.1| tyrosyl-tRNA synthetase [Caldicellulosiruptor kronotskyensis 2002]
 gi|312203290|gb|ADQ46617.1| tyrosyl-tRNA synthetase [Caldicellulosiruptor kronotskyensis 2002]
          Length = 396

 Score =  136 bits (342), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 118/412 (28%), Positives = 204/412 (49%), Gaps = 34/412 (8%)

Query: 3   AFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
            FK     I++E   + ++   R L+I          +G D     +H GH   L  L  
Sbjct: 9   VFKKGAAEIITEEELVEKLKQDRPLNI---------KLGLDPNVPDVHLGHAVVLRKLKQ 59

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD 122
           LQ  GH  I ++G  T++IGDP+ + E+R+ +  +E+Q+N E  K      +K    +  
Sbjct: 60  LQDLGHNIILIIGDFTAMIGDPTGKSETRKQLTKEEVQKNAEPFK---QQILKILDPQKT 116

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
            +  N+E WL  + ++D++  + S ++V RML  E+ R R+++   LS  EF Y ++Q Y
Sbjct: 117 TIRYNSE-WLEPMNFLDVIN-LASKYTVARMLERETFRQRMEKNLPLSIHEFFYPLMQGY 174

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL--KTPKLFALTSPLLTTASGT-KMGK 239
           D V +    +  +++G ++Q  NI+ G  L +    KT ++ AL  P+L    G  KM K
Sbjct: 175 DSVVI----EADVELGATEQKFNILMGRTLQKEYGCKTIQV-ALLMPILVGTDGVNKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA-KLQGKEIN-- 296
           +L   I +N+    P   +    +I D  ++S+ +  T L   EI+ +  KL+   ++  
Sbjct: 230 SLGNYIGINE---PPNVMYGKVMSIPDEIMISYYELTTDLEPEEIEEIKRKLEEGTLHPR 286

Query: 297 EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLI 356
           +AK  +A EI  + HG E A KA    ++ F       ++P + +   +V     L   +
Sbjct: 287 DAKMRLAREIVKLYHGEEAALKAEEEFIKVFQKKDIPDNIPEVELESSKVY----LPRFM 342

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGK 408
           V+    +ST+E  R +KS A+K+N   +++  L I+LQ+ D     KL F K
Sbjct: 343 VENKLCSSTSEGMRLIKSGAVKLNGEKVND--LDIELQNGDVLQVGKLKFVK 392


>gi|258515600|ref|YP_003191822.1| tyrosyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771]
 gi|257779305|gb|ACV63199.1| tyrosyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771]
          Length = 406

 Score =  136 bits (342), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 97/352 (27%), Positives = 174/352 (49%), Gaps = 17/352 (4%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  +   Q  GHK I ++G  T  IGDP+ + E+R+ +  +E+
Sbjct: 42  LGLDPTAPDIHLGHTVVLQKMRQFQDLGHKAIIILGDFTGRIGDPTGKSETRKQLTEEEV 101

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
            EN    K       K    +   L+ N+E WL  + + D++ E+ + ++V RML  +  
Sbjct: 102 LEN---AKTYERQIFKILDAEKTKLVFNSE-WLGKLNFADVI-ELSAKYTVARMLERDDF 156

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R +    +S  EF Y ++Q YD V L    +  +++GG+DQ  N++ G  L +     
Sbjct: 157 AKRYRENLPISIHEFFYPLMQGYDSVAL----EADVELGGTDQKFNLLMGRTLQKEYGQK 212

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
              A+T P++    G  KM K+L   I +++   SP   +    +I D  +V + + +T 
Sbjct: 213 PQIAITMPIIEGLDGVQKMSKSLGNYIGVDE---SPREMYGKTMSITDEIMVRYFELVTQ 269

Query: 279 LPMSEIDRMAK-LQGKEIN--EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQH 335
           +P+ E+  +++ LQ   ++  + K  +A EIT + HG+E A +A       F        
Sbjct: 270 VPLEEVRAISEGLQNSTMHPRDVKMRLAREITAVYHGQEAALQAEEEFKRIFQQGDLPDD 329

Query: 336 MPTISISKDEVSRG-MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISN 386
           +P   I +D +  G + +  L+ +AG  +S +EA+R +    +KI+   + +
Sbjct: 330 IPDFVIKEDGLENGTIRMDKLLFQAGLTSSASEAKRLISQGGVKIDGHKVED 381


>gi|40063225|gb|AAR38052.1| tyrosyl-tRNA synthetase [uncultured marine bacterium 577]
          Length = 400

 Score =  136 bits (342), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 104/364 (28%), Positives = 176/364 (48%), Gaps = 33/364 (9%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   L  +  LQ  GH    L+G  T +IGDPS ++ +R  +  +++ 
Sbjct: 40  GFDPTAPDLHLGHTVLLNKMRQLQDMGHHIQFLIGDFTGMIGDPSGKNATRPPLTREQVA 99

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           EN +         +K  + +T+     N  W+  +   DLL+ I S  +V RML  +   
Sbjct: 100 ENAKTYTDQVFKVLK--SDQTEVAF--NSKWMSQLNAADLLK-IASTHTVARMLERDDFG 154

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R +  Q +S  E  Y ++QAYD V L  +    +++GG+DQ  N++ G +L +    P 
Sbjct: 155 KRYQNNQPISIHELLYPLIQAYDSVMLKAD----IELGGTDQKFNLLVGRELQKHFNQPP 210

Query: 221 LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYN---------FWQYWRNIDDADVV 270
              LT PLL    G  KM K+L+  I +++     +           WQY       +++
Sbjct: 211 QCILTMPLLVGLDGVNKMSKSLNNYIGIDEAAEEIFGKIMSISDELMWQYL------ELL 264

Query: 271 SFAKRLTTLP-MSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDM 329
           SF   +T      EI+     QG+   + K I A EI    H +++AEK+       F  
Sbjct: 265 SFESLVTIRKWKQEIE-----QGRNPRDIKVIFAKEIVARFHNKQDAEKSIINFEARFKH 319

Query: 330 SIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKL 389
               +++P I +  ++   G+G+  ++ ++G   ST+EA R ++   +K+N   IS++ L
Sbjct: 320 GAIPENIPEIKLHSED--GGLGITKILKQSGLTASTSEALRMIEQKGVKLNGEKISDKSL 377

Query: 390 QIKL 393
           ++KL
Sbjct: 378 KLKL 381


>gi|312792884|ref|YP_004025807.1| tyrosyl-tRNA synthetase [Caldicellulosiruptor kristjanssonii
           177R1B]
 gi|312180024|gb|ADQ40194.1| tyrosyl-tRNA synthetase [Caldicellulosiruptor kristjanssonii
           177R1B]
          Length = 396

 Score =  136 bits (342), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 118/412 (28%), Positives = 204/412 (49%), Gaps = 34/412 (8%)

Query: 3   AFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
            FK     I++E   + ++   R L+I          +G D     +H GH   L  L  
Sbjct: 9   VFKKGAAEIITEEELVEKLKQDRPLNI---------KLGLDPNVPDVHLGHAVVLRKLKQ 59

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD 122
           LQ  GH  I ++G  T++IGDP+ + E+R+ +  +E+Q+N E  K      +K    +  
Sbjct: 60  LQDLGHNIILIIGDFTAMIGDPTGKSETRKQLTKEEVQKNAEPFK---QQILKILDPQKT 116

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
            +  N+E WL  + ++D++  + S ++V RML  E+ R R+++   LS  EF Y ++Q Y
Sbjct: 117 TIRYNSE-WLEPMNFLDVIN-LASKYTVARMLERETFRQRMEKNLPLSIHEFFYPLMQGY 174

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL--KTPKLFALTSPLLTTASGT-KMGK 239
           D V +    +  +++G ++Q  NI+ G  L +    KT ++ AL  P+L    G  KM K
Sbjct: 175 DSVVI----EADVELGATEQKFNILMGRTLQKEYGCKTIQV-ALLMPILVGTDGVNKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA-KLQGKEIN-- 296
           +L   I +N+    P   +    +I D  ++S+ +  T L   EI+ +  KL+   ++  
Sbjct: 230 SLGNYIGINE---PPNVMYGKVMSIPDEIMISYYELTTDLEPEEIEEIKRKLEEGTLHPR 286

Query: 297 EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLI 356
           +AK  +A EI  + HG E A KA    ++ F       ++P + +   +V     L   +
Sbjct: 287 DAKMRLAREIVKLYHGEEAALKAEEEFIKVFQKKDIPDNIPEVELQSSKVY----LPRFM 342

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGK 408
           V+    +ST+E  R +KS A+K+N   +++  L I+LQ+ D     KL F K
Sbjct: 343 VENKLCSSTSEGMRLIKSGAVKLNGEKVND--LDIELQNGDVLQVGKLKFVK 392


>gi|297172919|gb|ADI23880.1| tyrosyl-tRNA synthetase [uncultured gamma proteobacterium
           HF4000_48J03]
          Length = 404

 Score =  135 bits (341), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 109/376 (28%), Positives = 183/376 (48%), Gaps = 25/376 (6%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G+D TA  LH GH   +  +   Q+ GH+ I L+G  T +IGDPS  +E+R ++  ++I
Sbjct: 38  VGFDPTAPDLHLGHTVIINKMRQFQEFGHEIIFLIGDFTGMIGDPSGVNETRPVLTREQI 97

Query: 100 QENIEKI-KGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
            EN     K IF    K  T      +  N +W+  +    L+ EI S ++V RML  + 
Sbjct: 98  DENAATYEKQIFKILDKDLTR-----IEFNSSWMQQVNSSKLI-EIASKYTVARMLERDD 151

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
            ++R K    +S  E  Y ++QAYD V L    +  +++GG+DQ  N++ G  L +    
Sbjct: 152 FKNRFKTGNPISIHELLYPLVQAYDSVAL----EADVELGGTDQKFNLLVGRHLQKLYGQ 207

Query: 219 PKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT 277
           P   A+T PLL    G  KM KT +  I L     SP +      +I D  +  + + L+
Sbjct: 208 PPQTAITLPLLEGLDGVKKMSKTANNYIALT---DSPRDMLGKIMSISDELMWRYFELLS 264

Query: 278 TLPMSEIDRMAKL--QGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQH 335
              + EI  + K   +GK   + K ++A EI    HG++ ++ A  + +  F      + 
Sbjct: 265 ARSLDEIGLLQKQVKKGKNPRDIKFLLAEEIVERFHGKQSSDDAKASFLRQFQQGQMPEE 324

Query: 336 MPTISISKDEVSRGMGLLTL---IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
           + ++SI+  EV    G++ +   +  A   TS +E  R +K+ ++++    I   +LQ+ 
Sbjct: 325 IKSVSINYSEVESEPGIVNMAKVLYLANLVTSVSEGHRAIKAGSVRLEGEKIERSQLQM- 383

Query: 393 LQDFDSTGNIKLSFGK 408
               D+     LSFGK
Sbjct: 384 ----DANSRHILSFGK 395


>gi|309973283|gb|ADO96484.1| Tyrosyl-tRNA synthetase [Haemophilus influenzae R2846]
          Length = 395

 Score =  135 bits (341), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 108/381 (28%), Positives = 176/381 (46%), Gaps = 29/381 (7%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           ILSE   I ++   R L +          +G D TA  +H GH   L  L   Q+ GH+ 
Sbjct: 18  ILSEADLIEKLKENRPLKV---------KLGADPTAPDIHLGHTVVLNKLRQFQQLGHEV 68

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
             L+G  T ++GDPS ++ +R  +  +++  N E  K       K    +   ++ N+E 
Sbjct: 69  YFLIGDFTGMVGDPSGKNATRPPLSREDVLRNAETYK---EQIYKILDPQKTKIVFNSE- 124

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           WL  +    ++R + S ++V RML  +  + R    Q ++  EF Y +LQ YD V L   
Sbjct: 125 WLSKLGTEGMIR-LASNYTVARMLERDDFKKRFGNNQPIAIHEFIYPLLQGYDSVAL--- 180

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNK 249
            D  +++GG+DQ  N++ G +L +        A+T PLL    G  KM K+L   I + +
Sbjct: 181 -DADVELGGTDQKFNLLVGRELQKSAGKKPQVAITLPLLVGLDGEKKMSKSLGNYIGVTE 239

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATEIT 307
              +P + +    +I D  +  +   L+  P+SEI ++      GK   + K ++A E+ 
Sbjct: 240 ---APSDMFGKVMSISDELMWDWYNLLSFRPLSEIAQLKSEVENGKNPRDVKILLAKELI 296

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
              H  E A  A    +  F        MP  + S +     +GL TL+ +AG   ST+E
Sbjct: 297 ARFHNEEAANVAEQEFINRFQKGAMPDEMPEFTFSGE-----IGLATLLKEAGLVPSTSE 351

Query: 368 ARRHLKSNAIKINNSIISNEK 388
           A R  +   +KIN   + N K
Sbjct: 352 AIRSAQQGGVKINGEKVDNVK 372


>gi|77164428|ref|YP_342953.1| tyrosyl-tRNA synthetase [Nitrosococcus oceani ATCC 19707]
 gi|254434296|ref|ZP_05047804.1| tyrosyl-tRNA synthetase [Nitrosococcus oceani AFC27]
 gi|115305811|sp|Q3JCM3|SYY_NITOC RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|76882742|gb|ABA57423.1| tyrosyl-tRNA synthetase [Nitrosococcus oceani ATCC 19707]
 gi|207090629|gb|EDZ67900.1| tyrosyl-tRNA synthetase [Nitrosococcus oceani AFC27]
          Length = 407

 Score =  135 bits (340), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 103/354 (29%), Positives = 172/354 (48%), Gaps = 17/354 (4%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   L  L   Q+ GH+ + L+G  T +IGDPS ++ +R+ +   +I 
Sbjct: 39  GFDPTAPELHLGHTVLLNKLRQFQEFGHEVLFLIGDFTGMIGDPSGKNVTRQPLTRDKIL 98

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           EN       +   I         L++ N +W+  +   DL+R + S ++V RML  +   
Sbjct: 99  ENAR----TYEEQIFRVLDPEKTLVVFNSSWMSGMTAADLVR-LSSHYTVARMLERDDFY 153

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R + ++ ++  EF Y +LQ YD V L  +    +++GG+DQ  N++ G DL +     +
Sbjct: 154 KRYQGKRPIAIHEFLYPLLQGYDSVALKAD----VELGGTDQKFNLLVGRDLQKAYGQEQ 209

Query: 221 LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTL 279
              +T P+L    G  KM K+L   I +++    P   +    +I D  +  + + L++ 
Sbjct: 210 QIIITMPILEGLDGVQKMSKSLGNYIGISE---PPREIFGKLMSISDDLMWRYLELLSSR 266

Query: 280 PMSEIDRMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMP 337
           PMSEI R  K   QG    + K  +A EI    H    AE+   A +  F      + +P
Sbjct: 267 PMSEISRWKKEVEQGANPRDIKVKLAKEIVARFHDDSMAEQVHEAFVAQFRRGAMPEDIP 326

Query: 338 TISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
            I I       G+ +  L+ ++    ST+E+ R +K  A+KI+   + N+ LQI
Sbjct: 327 EILIVAGR--EGIAIARLLKESALTASTSESLRLIKQGAVKIDGQRLGNQSLQI 378


>gi|222528887|ref|YP_002572769.1| tyrosyl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725]
 gi|222455734|gb|ACM59996.1| tyrosyl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725]
          Length = 396

 Score =  135 bits (340), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 118/412 (28%), Positives = 204/412 (49%), Gaps = 34/412 (8%)

Query: 3   AFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
            FK     I++E   + ++   R L+I          +G D     +H GH   L  L  
Sbjct: 9   VFKKGAAEIITEEELVEKLKQDRPLNI---------KLGLDPNVPDVHLGHAVVLRKLKQ 59

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD 122
           LQ  GH  I ++G  T++IGDP+ + E+R+ +  +E+Q+N E  K      +K    +  
Sbjct: 60  LQDLGHNIILIIGDFTAMIGDPTGKSETRKQLTKEEVQKNAEPFK---QQVLKILDPQKT 116

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
            +  N+E WL  + ++D++  + S ++V RML  E+ R R+++   LS  EF Y ++Q Y
Sbjct: 117 TIRYNSE-WLEPMNFLDVIN-LASKYTVARMLERETFRQRMEKNLPLSIHEFFYPLMQGY 174

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL--KTPKLFALTSPLLTTASGT-KMGK 239
           D V +    +  +++G ++Q  NI+ G  L +    KT ++ AL  P+L    G  KM K
Sbjct: 175 DSVVI----EADVELGATEQKFNILMGRTLQKEYGCKTIQV-ALLMPILVGTDGVNKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA-KLQGKEIN-- 296
           +L   I +N+    P   +    +I D  ++S+ +  T L   EI+ +  KL+   ++  
Sbjct: 230 SLGNYIGINE---PPNVMYGKVMSIPDEIMISYYELTTDLEPEEIEEIKRKLEEGTLHPR 286

Query: 297 EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLI 356
           +AK  +A EI  + HG E A+KA    +  F        +P + ++  +V     L   +
Sbjct: 287 DAKMRLAREIVKLYHGEEAAKKAEEEFIRVFQKKDVPDDIPEVELANAKVY----LPRFM 342

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGK 408
           V+    +ST+E  R +KS A+K+N   ++  +L I+LQ+ D     KL F K
Sbjct: 343 VENKLCSSTSEGMRLIKSGAVKLNGEKVN--ELDIELQNGDVLQVGKLKFVK 392


>gi|302502897|ref|XP_003013409.1| hypothetical protein ARB_00227 [Arthroderma benhamiae CBS 112371]
 gi|291176973|gb|EFE32769.1| hypothetical protein ARB_00227 [Arthroderma benhamiae CBS 112371]
          Length = 475

 Score =  135 bits (340), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 91/247 (36%), Positives = 133/247 (53%), Gaps = 26/247 (10%)

Query: 105 KIKGIFSSFIKYGTGKTD--------ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSF 156
           ++K + +SF +YG GK            + NN TW      ID+L  +G    +  ML  
Sbjct: 4   QLKKLGASFERYG-GKHGYSWEWAWRRALENNNTWWNKETLIDVLGTLGQHARIGTMLGR 62

Query: 157 ESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGID-LGER 215
           E V++RL+    +SF EF Y I+QA+D+  L +     +Q+GGSDQ GNI  GID + + 
Sbjct: 63  EPVKTRLESGSGMSFTEFCYPIMQAWDWWHLYQK-GVMIQVGGSDQSGNIQFGIDTIKQV 121

Query: 216 LKT----------PKL---FALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWR 262
           LKT          P+L   F LT PLLTT++G K+GK+   +IWL+K+MTS Y+ +QY+ 
Sbjct: 122 LKTSPIETKPGEDPELSMPFGLTVPLLTTSTGEKIGKSAGNSIWLDKDMTSTYDLYQYFM 181

Query: 263 NIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATEITTMVHGREEAEKAA 320
              D D+    K  T LP S I  + +   K  +   A+  +A E   +VHG +EAE+A+
Sbjct: 182 RQPDQDMERLLKMFTFLPTSRIPEIIEEHNKAPSRRVAQHTLAQEFVELVHGPKEAEEAS 241

Query: 321 TAAMECF 327
            A    F
Sbjct: 242 KAHKAIF 248


>gi|258578085|ref|XP_002543224.1| tyrosyl-tRNA synthetase [Uncinocarpus reesii 1704]
 gi|237903490|gb|EEP77891.1| tyrosyl-tRNA synthetase [Uncinocarpus reesii 1704]
          Length = 458

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 77/216 (35%), Positives = 121/216 (56%), Gaps = 20/216 (9%)

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           ++ NN TW     + D++  +G    +  ML  ++V+SRL+    +S  EF Y I+QA+D
Sbjct: 30  VLENNNTWWNKQTFADVMTTLGQAVRLGPMLGRDNVKSRLEDGSGMSLAEFCYPIMQAWD 89

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDL-----------------GERLKTPKLFALTS 226
           F  L + +  ++Q+GGSDQ+GNI+ GID                  GE         +T+
Sbjct: 90  FWYLFQ-HGTQIQVGGSDQYGNILFGIDAIKGILKNNPNSEFAPKPGEDPDLVNPIGITT 148

Query: 227 PLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR 286
           PLLTT+SG K GK+   AIWL+K+MTS Y+ +QY+  + D+DV  + K  T +P SEI  
Sbjct: 149 PLLTTSSGEKFGKSAGNAIWLDKDMTSCYDLYQYFVRLPDSDVERYLKLFTFIPTSEIKT 208

Query: 287 MAKLQGKEINE--AKKIIATEITTMVHGREEAEKAA 320
           + +   +  ++  A+  +A E   ++HG  EA+KAA
Sbjct: 209 LMEKHNENPSKRLAQHKLAVEFVEIIHGSNEAQKAA 244


>gi|302657965|ref|XP_003020693.1| hypothetical protein TRV_05219 [Trichophyton verrucosum HKI 0517]
 gi|291184550|gb|EFE40075.1| hypothetical protein TRV_05219 [Trichophyton verrucosum HKI 0517]
          Length = 475

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 84/217 (38%), Positives = 120/217 (55%), Gaps = 17/217 (7%)

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN TW      ID+L  +G    +  ML  E V++RL+    +SF EF Y I+QA+D+  
Sbjct: 33  NNNTWWNKETLIDVLGTLGQHARIGTMLGREPVKTRLESGSGMSFTEFCYPIMQAWDWWH 92

Query: 187 LAKNYDCRLQMGGSDQWGNIICGID-LGERLKT----------PKL---FALTSPLLTTA 232
           L +     +Q+GGSDQ GNI  GID + + LKT          P+L   F LT PLLTT+
Sbjct: 93  LYQK-GVMIQVGGSDQSGNIQLGIDTIKQVLKTSPIETKPGEDPELSMPFGLTVPLLTTS 151

Query: 233 SGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG 292
           +G K+GK+   +IWL+K+MTS Y+ +QY+    D D+    K  T LP S I  + +   
Sbjct: 152 TGEKIGKSAGNSIWLDKDMTSTYDLYQYFMRQPDQDMERLLKMFTFLPTSRIPEIIEEHN 211

Query: 293 KEINE--AKKIIATEITTMVHGREEAEKAATAAMECF 327
           K  +   A+  +A E   +VHG +EAE+A+ A    F
Sbjct: 212 KAPSRRVAQHTLAQEFVELVHGPKEAEEASKAHKAIF 248


>gi|239617872|ref|YP_002941194.1| tyrosyl-tRNA synthetase [Kosmotoga olearia TBF 19.5.1]
 gi|239506703|gb|ACR80190.1| tyrosyl-tRNA synthetase [Kosmotoga olearia TBF 19.5.1]
          Length = 397

 Score =  134 bits (338), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 112/410 (27%), Positives = 195/410 (47%), Gaps = 34/410 (8%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
            K + +S++SE   I ++   R L +          +G D +   LH GH   L  L   
Sbjct: 11  LKRNSVSLISEEELIERLKLGRPLRV---------KLGVDPSRPDLHLGHAVVLRKLREF 61

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q  GH  I ++G  T+ IGDPS R ++R M+  +E ++N   I     +F      KT+ 
Sbjct: 62  QDLGHHVILIIGDFTARIGDPSGRSKTRPMLSKEEAKQN--AITYSQQAFKILDRDKTE- 118

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           +  N+E WL  + + D++R + + ++V RML       R K  + +S  EF Y + QAYD
Sbjct: 119 IKFNSE-WLDGMSFEDVIR-LSAKYTVARMLERNDFEKRYKNNEPISIAEFLYPLAQAYD 176

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLS 242
            V +  +    +++GG DQ+ N +    + E         LT PL+    G  KM K+  
Sbjct: 177 SVVVKAD----VEIGGDDQFFNFVVARKIQEEYGLQPQVILTMPLIEGTDGNLKMSKSYG 232

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK-LQGKEIN--EAK 299
             +        P   +    +I D  ++ + + LT +P   I +  + ++ ++IN  + K
Sbjct: 233 NYVAFE---DPPEEMFGKLMSIPDTLIIKYMRLLTDIPEERILQYERDIKSRKINPRDVK 289

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKA 359
            ++A EIT   HG E A +A    ++ F        +P I + + E+S    L+ L+VK 
Sbjct: 290 MLLAFEITRFFHGEEAAVRARENFIKVFRKKELPSEIPEIKVKESELS----LVDLMVKY 345

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
              +S +EARR +    +++NN++I +   ++ +    S G+I L  GK+
Sbjct: 346 ANISSKSEARRLISQGGVRLNNTVIKDIHAKVAV----SNGDI-LRIGKR 390


>gi|320108846|ref|YP_004184436.1| tyrosyl-tRNA synthetase [Terriglobus saanensis SP1PR4]
 gi|319927367|gb|ADV84442.1| tyrosyl-tRNA synthetase [Terriglobus saanensis SP1PR4]
          Length = 417

 Score =  134 bits (338), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 101/360 (28%), Positives = 171/360 (47%), Gaps = 35/360 (9%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI- 99
           G+D TA  LH GH   +  L   Q+ GH+ I L+G  T++IGDP+ + ++R+ +  ++I 
Sbjct: 49  GFDPTAPDLHLGHTVLMRKLRHFQQLGHQVIFLIGDFTALIGDPTGKSQTRKPLTREQIA 108

Query: 100 ------QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRM 153
                 QE + KI     + ++Y           N  WL  ++Y D +R +   F++++M
Sbjct: 109 LNAETYQEQVFKILDRDKTEVRY-----------NSEWLGELRYEDTIRLMAQ-FTLSQM 156

Query: 154 LSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLG 213
           +  E    R   E+ ++  E  Y ++Q YD V L  +    +++GG+DQ  N++ G DL 
Sbjct: 157 IEREEFHKRFNAEEPIALHELMYPVMQGYDSVALKSD----VELGGTDQKFNLMRGRDLQ 212

Query: 214 ERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSF 272
                     LT P++    G  KM K+L+ AI + +   +P++ +     + D  +  +
Sbjct: 213 RHFGQQPQIVLTMPIIEGLDGVQKMSKSLNNAIGVTE---APFDMFTKLMQVSDELMWKY 269

Query: 273 AKRLTTLPMSEIDRMAKLQGK---EINEAKKIIATEITTMVHGREEAEKAATAAMECFDM 329
              LT LP S+ID + +          +AKK +A  IT   H  E A++A       F  
Sbjct: 270 YTFLTDLPQSQIDALREQVAAGTLHPMQAKKDLARTITAGFHTAEAAQRAEENWSTQFQK 329

Query: 330 SIHSQHMPTISISKDEVSRGMGLLT-----LIVKAGFATSTNEARRHLKSNAIKINNSII 384
              S     I++ K E+      L+     L+V AG A S  EARR     A++I+ ++I
Sbjct: 330 GGVSDDTERITVPKSELGVETEPLSLNVDRLLVTAGLANSMGEARRKRSEKAVRIDEAVI 389


>gi|257784812|ref|YP_003180029.1| tyrosyl-tRNA synthetase [Atopobium parvulum DSM 20469]
 gi|257473319|gb|ACV51438.1| tyrosyl-tRNA synthetase [Atopobium parvulum DSM 20469]
          Length = 403

 Score =  134 bits (338), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 106/368 (28%), Positives = 176/368 (47%), Gaps = 37/368 (10%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D T+  LH GH   L  +   Q  GH    ++G GT++IGDPS RD +R  + ++++
Sbjct: 38  LGVDPTSPDLHLGHAVPLRKMRQFQDLGHNVTLIIGSGTALIGDPSGRDSTRPPLTAEQV 97

Query: 100 QENIEKIKGIFSSFIKYGTGKTDA---LMLNNETWLCSIKYIDLLREIG--SFFSVNRML 154
             N E       +++       D     +++N  W   IK ++L   +G  S F++ R+L
Sbjct: 98  DANAE-------TYVNQAMKILDPERTTVVHNGDW---IKPMNLETMLGLMSKFTIARIL 147

Query: 155 SFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
             E   +R   +Q ++  EF Y +LQAYD V +  +    ++MGG+DQ  N++ G DL  
Sbjct: 148 EREDFSNRYHNQQPIALHEFIYPVLQAYDSVVIKAD----VEMGGNDQIFNLLAGRDLMR 203

Query: 215 RLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFA 273
            +      ALT PLL    GT KM K+    I L  E   P + +    +I D  +  + 
Sbjct: 204 DMDMEPQIALTMPLLVGTDGTKKMSKSYGNYIGLTDE---PNDMFGKVMSITDEIIPMYY 260

Query: 274 KRLTTLPMSEIDRMAKL---QGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMS 330
           +  +TL + E+D + K       +  + K+ +   I  + HG  E  KA  +    FD  
Sbjct: 261 RLCSTLSIDELDAIDKSFEDGTADPYQLKRALGRNIVDLYHGEGEGLKAQAS----FDAQ 316

Query: 331 IHSQHMP------TISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSII 384
             +  +P       I++  DE    + L  ++V+AG A+S  EARR +    IKIN   I
Sbjct: 317 FKNNEVPDDVKEFAITLEADEDGL-IYLPKILVEAGIASSNGEARRLIDGCGIKINQKPI 375

Query: 385 SNEKLQIK 392
           + +  +++
Sbjct: 376 AAKTYKVE 383


>gi|309389099|gb|ADO76979.1| tyrosyl-tRNA synthetase [Halanaerobium praevalens DSM 2228]
          Length = 426

 Score =  134 bits (337), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 99/360 (27%), Positives = 177/360 (49%), Gaps = 19/360 (5%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D +A  +H GH   L  L   Q  GH+   ++G  T +IGDP+ + E+R  +  +E+
Sbjct: 61  LGLDPSAPDIHLGHTVVLRKLKQFQDLGHQVYLIIGDFTGMIGDPTGKSETRNQLTKEEV 120

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
            EN +  +  FS  +     K    ++ N  WL  + + D+L E+ + ++V R+L  +  
Sbjct: 121 LENAKTYQEQFSKVLDPEKTK----VVFNGDWLKEMDFADVL-ELSAHYTVARILERDDF 175

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R    + +   EF Y ++Q YD V +  +    +++GG+DQ  N++ G  L +     
Sbjct: 176 SKRYNAGKPIGIHEFFYPLMQGYDSVAIKAD----VELGGTDQRFNLLVGRKLQQEYGQK 231

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               L  PLL    G  KM K+L   I +      P + +    +I DA ++ + + LT 
Sbjct: 232 AQVVLMMPLLEGLDGVNKMSKSLDNYIGV---YDQPADMFGKVMSIPDAMIIRYFELLTD 288

Query: 279 LPMSEIDRM-AKLQGKEIN--EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQH 335
           + +++++ M AKL+  + N  E KK +A EI T  H +E A +A       F      + 
Sbjct: 289 ISIAKLNEMKAKLERDDFNPMELKKQLAAEIVTEYHDQEAAVEARREFESVFSKGNLPED 348

Query: 336 MPTISISKDEVSRG-MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
           +P I I++ ++  G + ++ L+   G   S ++ARR +K  A+ I++     EK+ I L+
Sbjct: 349 IPIIEIAEADLDAGELWIVKLVAATGLVDSNSQARRMIKQGAVSIDDQ--KYEKINIDLE 406


>gi|297172406|gb|ADI23380.1| tyrosyl-tRNA synthetase [uncultured gamma proteobacterium
           HF0770_28K04]
          Length = 404

 Score =  134 bits (337), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 109/376 (28%), Positives = 182/376 (48%), Gaps = 25/376 (6%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G+D TA  LH GH   +  +   Q+ GH+ I L+G  T +IGDPS  +E+R ++  ++I
Sbjct: 38  VGFDPTAPDLHLGHTIIINKMRQFQEFGHEIIFLIGDFTGMIGDPSGVNETRPVLTREQI 97

Query: 100 QENIEKI-KGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
            EN     K IF    K  T      +  N +W+  +    L+ EI S ++V RML  + 
Sbjct: 98  DENAATYEKQIFKILDKDLTR-----IEFNSSWMQQVNSSKLI-EIASKYTVARMLERDD 151

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
            ++R K    +S  E  Y ++QAYD V L    +  +++GG+DQ  N++ G  L +    
Sbjct: 152 FKNRFKTGNPISIHELLYPLVQAYDSVAL----EVDVELGGTDQKFNLLVGRHLQQLYGQ 207

Query: 219 PKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT 277
           P   A+T PLL    G  KM KT +  I L     SP +      +I D  +  + K L+
Sbjct: 208 PPQTAITLPLLEGLDGVKKMSKTANNYIALT---DSPKDMLGKIMSISDELMWRYFKLLS 264

Query: 278 TLPMSEIDRMAKL--QGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQH 335
              + EI  + K   +GK   + K ++A EI    H ++ ++ A  + +  F      + 
Sbjct: 265 ARSLDEIGLLQKQVKKGKNPRDIKFLLAEEIVERFHDKQSSDDAKASFLRQFQQGQMPEE 324

Query: 336 MPTISISKDEVSRGMGLLTL---IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
           + ++SI+  EV    G++ +   +  A   TS +E  R +K+ ++++    I   +LQ+ 
Sbjct: 325 IKSVSINYSEVESEPGIVNMAKVLYLANLVTSVSEGHRAIKAGSVRLEGEKIERSQLQM- 383

Query: 393 LQDFDSTGNIKLSFGK 408
               D+     LSFGK
Sbjct: 384 ----DANSRHILSFGK 395


>gi|268679288|ref|YP_003303719.1| tyrosyl-tRNA synthetase [Sulfurospirillum deleyianum DSM 6946]
 gi|268617319|gb|ACZ11684.1| tyrosyl-tRNA synthetase [Sulfurospirillum deleyianum DSM 6946]
          Length = 402

 Score =  134 bits (337), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 113/361 (31%), Positives = 181/361 (50%), Gaps = 22/361 (6%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   L  +  LQK G     L+G  T +IGDP+ ++E+R+ +  + + 
Sbjct: 44  GFDPTAPDLHLGHTVLLQKMALLQKYGAIVQFLIGDFTGMIGDPTGKNETRKKLTREVVL 103

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
            N E  K     F      KT  +M N+E WL S+    L+ E+ + F+V RML  E   
Sbjct: 104 ANAETYKE--QVFKILDPAKT-VVMFNSE-WLGSMSASSLI-ELTTTFNVARMLEREDFE 158

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R K +  +S  EF Y +LQ YD V +     C ++MGG+DQ  N++ G  L       K
Sbjct: 159 KRYKSQMPISISEFLYPLLQGYDSVAMK----CDIEMGGTDQKFNLLMGRHLQRVYGIGK 214

Query: 221 LFA-LTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
             A +  PLL    G  KM K+L   I + +   +P + +    +I D  +  + + L++
Sbjct: 215 EQAVMMMPLLEGLDGVNKMSKSLGNYIGVTE---APADMFGKMLSISDVLMWRYYELLSS 271

Query: 279 LPMSEIDRMA-KLQGKEIN--EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQH 335
             + EI R+   ++  EI+   AK++IA EI T  HG +EA KA     E F+  +H+Q+
Sbjct: 272 KSLEEIARLKHDVEEGEIHPKHAKEMIAMEIVTRYHGADEALKAQ----ETFN-RVHAQN 326

Query: 336 MPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
                I        + +   +V  G   ST++ARR +K   +K+N   + +E+LQ++  +
Sbjct: 327 EIPHDIELFTCKEPIWIAKALVDCGLEESTSQARRDIKQGGVKLNQIKVEDEQLQLECGE 386

Query: 396 F 396
           +
Sbjct: 387 Y 387


>gi|297568891|ref|YP_003690235.1| tyrosyl-tRNA synthetase [Desulfurivibrio alkaliphilus AHT2]
 gi|296924806|gb|ADH85616.1| tyrosyl-tRNA synthetase [Desulfurivibrio alkaliphilus AHT2]
          Length = 403

 Score =  134 bits (337), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 103/373 (27%), Positives = 179/373 (47%), Gaps = 23/373 (6%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   +  +   Q  GH+ + L+G  T  IGDP+ + E+R+ + ++++ 
Sbjct: 42  GFDPTAPDLHLGHTVLIQKMKHFQDLGHQILFLIGDFTGRIGDPTGKSETRKPLSAEDVA 101

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
            N E  K     F      KT  +   N +WL  +   D ++ + +  +V RML  E  +
Sbjct: 102 RNAETYKE--QVFKILDPDKTQVVF--NSSWLNELSSQDFIK-LAAQLTVARMLEREDFK 156

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R   E+ +   EF Y ++Q YD V L  +    +++GG+DQ  N++ G DL        
Sbjct: 157 QRFVNEKPIGVHEFLYPLIQGYDSVALKAD----IELGGTDQLFNLLTGRDLQRVWGQDP 212

Query: 221 LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTL 279
              +T PLL    G  KM K+L+  I + +     Y       ++ D+ +  + + L+ L
Sbjct: 213 QVVITMPLLEGLDGVNKMSKSLANYIGICENADDIYG---KTMSMPDSLMFRYYELLSDL 269

Query: 280 PMSEIDRM-AKLQGKEIN--EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM 336
             +EIDR+ A+++    +  E K+ +A E+T   HG++ A++AA    + F      + +
Sbjct: 270 SPAEIDRLKAEMEAGRAHPKEVKQQLARELTARFHGQDAAQRAAANFDKVFKQHELPEDL 329

Query: 337 PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
           P I++   +  + + L  L+V AG    T EARR +   A+ +N      EK+       
Sbjct: 330 PEITLPAGD--QAVWLPRLLVDAGLVKGTGEARRMIGQQAVSVN-----GEKVAEVEATV 382

Query: 397 DSTGNIKLSFGKK 409
            + G + L  GK+
Sbjct: 383 AAAGEVLLKVGKR 395


>gi|221632775|ref|YP_002521997.1| tyrosyl-tRNA synthetase [Thermomicrobium roseum DSM 5159]
 gi|221155495|gb|ACM04622.1| tyrosyl-tRNA synthetase [Thermomicrobium roseum DSM 5159]
          Length = 405

 Score =  134 bits (337), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 108/410 (26%), Positives = 189/410 (46%), Gaps = 26/410 (6%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           +  F+ +L  RG +  +        L  +  +   +G D T   +H GH      L   Q
Sbjct: 7   REAFVDLLLSRGTVDVVVREHLRARLLGEQPLRVKLGVDPTRPDIHLGHYVCFRKLRQFQ 66

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GH+ + ++G  T+ IGDPS R   R M+ ++E++ N E        F K     T A 
Sbjct: 67  ALGHQVVVIIGDWTARIGDPSGRSSQRPMLTAEEVRANAET---YLEQFFKV-VDVTKAE 122

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           ++   TW  +    D++R + S ++V ++L+ E    R +    +S  E  Y +LQAYD 
Sbjct: 123 IVWQSTWFGNFTLEDVIR-LASKYTVAKLLTREDFAKRYEEGSPISITELLYPLLQAYDS 181

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSG 243
           V +  +    +++GG+DQ  N++ G D+           LT PLL    G  KM K+   
Sbjct: 182 VAIQAD----VEIGGTDQLFNLLVGRDIMREYGLEPQDILTVPLLVGTDGHLKMSKSYGN 237

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM-AKLQGKEIN--EAKK 300
            I +N     P   +    +I D  +  + + LT +P  EIDRM  +++   +N  +AK+
Sbjct: 238 YIAVND---PPEEMFGKIMSIPDHVLGDYFRLLTDIPDEEIDRMIVEMRAGRLNPRDAKE 294

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
            +A  I + +H  E AE+A         +    + +P + +      R   +L  +V AG
Sbjct: 295 HLAFVIVSDLHSPEAAEQAREHFHRVHRLREIPEQIPEVPVP----GRAR-VLDYVVLAG 349

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
           FA S NEARR ++   ++++   + + +  ++LQ+      + L  GK+ 
Sbjct: 350 FARSNNEARRLVQQGGVRLDGRRLDDPEEMLELQE-----PVVLQVGKRR 394


>gi|206900875|ref|YP_002251199.1| tyrosyl-tRNA synthetase [Dictyoglomus thermophilum H-6-12]
 gi|206739978|gb|ACI19036.1| tyrosyl-tRNA synthetase [Dictyoglomus thermophilum H-6-12]
          Length = 405

 Score =  134 bits (337), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 107/401 (26%), Positives = 188/401 (46%), Gaps = 39/401 (9%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
            KS+ + I+ E G   ++   RE         +   +G D +A  LH GH   L  L   
Sbjct: 14  LKSNVVEIIPEDGLYEKLKKARE-----EGRPLRVKLGADPSAPDLHLGHAVVLRKLKQF 68

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI-------QENIEKIKGIFSSFIKY 116
           Q  GH+ + ++G  T+ IGDPS R E+R+ +  +++       QE + KI  +  + I+Y
Sbjct: 69  QDLGHQVVFIIGDFTARIGDPSGRSETRKPLTPEQVKKNALTYQEQVGKILDVSKAEIRY 128

Query: 117 GTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNY 176
                       E W   +K  D+L  + S +++ RML  +    R K ++ +   E  Y
Sbjct: 129 -----------QEEWFGKMKLEDVLV-LTSKYTIARMLERDDFAQRFKEQKPIFIHEIMY 176

Query: 177 MILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-T 235
            +LQAYD V +  +    +++GG+DQ  N+I G ++          A+  P+L    G  
Sbjct: 177 PLLQAYDSVAIKAD----IELGGTDQKFNLIVGREIQREYGLEPQVAMLMPILEGLDGKQ 232

Query: 236 KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGK 293
           KM K+L   I L +    P   +    +I D  ++ + +  T LP  EI ++ +   +GK
Sbjct: 233 KMSKSLGNYIGLTE---PPNQMYGKVMSIPDELIIRYFELATELPKEEIRKIEQEMREGK 289

Query: 294 -EINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGL 352
               +AK  +A EI  + HG E + KA       F      +++P + IS+ ++     +
Sbjct: 290 LNPRDAKARLAREIVKIYHGEEASLKAEEEFNRIFRNKELPENVPEVEISEPKI----WI 345

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL 393
           + L+ + G A S +EA+R +   A++I+ + I +  L I +
Sbjct: 346 VKLLTQVGAAKSNSEAKRLISQGAVEIDGTRIEDINLDISI 386


>gi|170587925|ref|XP_001898724.1| tyrosyl-tRNA synthetase family protein [Brugia malayi]
 gi|158592937|gb|EDP31532.1| tyrosyl-tRNA synthetase family protein [Brugia malayi]
          Length = 429

 Score =  134 bits (336), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 116/374 (31%), Positives = 175/374 (46%), Gaps = 61/374 (16%)

Query: 39  YIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQE 98
           Y G+D TA SLH GHL  L  LF         I+L+GG T+ +GDPS     R ++   E
Sbjct: 76  YAGFDPTAESLHIGHLLILTNLFRAALHRCHAIALIGGATAHVGDPSGHITDRNIVPGHE 135

Query: 99  IQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
           I + + KI                     N   + SI+++++ R+    F +  ML    
Sbjct: 136 IDQYVRKI---------------------NLQLMSSIRFLEVCRD----FRLGDMLRLGM 170

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
           V+SR++    LS  EF Y ILQ+YD+  L+++Y+C  Q+GG+DQ G+   G D  +R KT
Sbjct: 171 VKSRMRDGSGLSCTEFLYQILQSYDWYRLSRDYNCHFQIGGNDQLGHFDAGYDYIKR-KT 229

Query: 219 PKLFA-LTSPLLTTASGTKMGKTLS--GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKR 275
            K+ A +  PLLT A G K+ KT      IWL++  TSP+ F+Q+           F+ +
Sbjct: 230 GKISASICLPLLTDAQGKKLSKTSKEHSNIWLDERKTSPFTFYQH-----------FSLQ 278

Query: 276 LTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS-Q 334
                           GK I + K  +A E+T +VHG    + A   +   F  S+   +
Sbjct: 279 TIEEIEEIEREHQANLGKWIAQEK--LAEELTKLVHGSNGLKIAKQCSKMLFSDSLSELR 336

Query: 335 HMPTISI-------SKDEVSRG----MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSI 383
            MPT  I       S  ++ R     +G L   V +G  +S N+    +K+ A+K+N   
Sbjct: 337 KMPTSFIEEQFGTASVQQLFRSRFSTIGELADKVHSGDGSSINK----MKTGALKLNGIQ 392

Query: 384 ISNEKLQIKLQDFD 397
            +N    I   DFD
Sbjct: 393 FTNPDEVI---DFD 403


>gi|332295722|ref|YP_004437645.1| Tyrosyl-tRNA synthetase [Thermodesulfobium narugense DSM 14796]
 gi|332178825|gb|AEE14514.1| Tyrosyl-tRNA synthetase [Thermodesulfobium narugense DSM 14796]
          Length = 393

 Score =  134 bits (336), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 108/371 (29%), Positives = 181/371 (48%), Gaps = 21/371 (5%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  LH GH   L  L   Q  GH  I ++G  T++IGDP+ + ++R  + + EI
Sbjct: 37  LGIDPTAPDLHLGHTVVLRKLKNFQDLGHNVILIIGDFTTLIGDPTGKSKTRPALSADEI 96

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           ++N +  K    +F      KT  ++  N  WL  I   +L++ I + F+V R+L  E+ 
Sbjct: 97  KKNAQTYKT--QAFKILDEKKT--IIKYNSEWLSKISLEELIK-ISAKFTVARILERETF 151

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             RLK  +++S  E  Y +LQAYD V +  +    +++GG+DQ  N++ G DL E++   
Sbjct: 152 SQRLKTNEAISLHEILYPLLQAYDSVAIKAD----VELGGTDQTFNLLIGRDLMEKMGME 207

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               LT P++    G  KM K+L   + + ++   P + +    +I D  +  +   LT 
Sbjct: 208 PQVCLTMPIIAGLDGKQKMSKSLGNYVGIAED---PKDIFGKLMSIPDELLRQYFILLTD 264

Query: 279 LPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPT 338
               EI    + + K   + KKI+A EIT M    EEA KA  +    F+     +  P 
Sbjct: 265 FKEDEISGFFE-RYKNPKDIKKILAFEITKMYSSEEEALKAKESFETAFEKRTFPKDAPV 323

Query: 339 ISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
                 E    + L  L+V  G   S++E +R +   AI+++   +++EK  +K      
Sbjct: 324 YKWPY-ENENEVWLPKLLVDLGLLKSSSEGKRLISQGAIEVDEETVTDEKFVVK------ 376

Query: 399 TGNIKLSFGKK 409
            G+ +L  G+K
Sbjct: 377 KGDHRLKVGRK 387


>gi|145519105|ref|XP_001445419.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124412874|emb|CAK78022.1| unnamed protein product [Paramecium tetraurelia]
          Length = 395

 Score =  134 bits (336), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 98/297 (32%), Positives = 157/297 (52%), Gaps = 21/297 (7%)

Query: 99  IQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
           I EN+EKI+    S      G+    +L+N  +    K ID + ++G  F +N +L+ + 
Sbjct: 80  IHENLEKIRKQLESI-----GQP-LQILDNMDFYRETKLIDFVSKVGRQFRMNSLLNKDH 133

Query: 159 VRSRLKR-EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK 217
           +  RL   +  LS  EF Y ILQ+YDF  L + YDC LQ+GGSDQWGNI  G D  ++  
Sbjct: 134 INKRLNSGDDGLSLTEFFYTILQSYDFAYLNEKYDCTLQIGGSDQWGNITNGCDFVKKEY 193

Query: 218 TPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT 277
             +++ +T+PLLT  +G K GK+   A++L+   +S +N  QY  N+ D  +  F   LT
Sbjct: 194 KKQVYGITTPLLTDKNGQKFGKSEGNALFLD--ASSKHNMKQYLLNLADDSMRDFLLMLT 251

Query: 278 TLPMSEIDRMAKL--QGKEINEAKKIIATEITTMVHGRE-EAEKAATAAMECFD--MSIH 332
            L   +ID + +   Q  E   A+K ++ E+  M++G E  AEK         D  M++ 
Sbjct: 252 FLKEEQIDSVMEQHKQSPEKRVAQKCLSDELLRMIYGEESSAEKNQILYGLRRDRLMNMS 311

Query: 333 SQHMPTIS--ISKD---EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSII 384
           +Q    ++  I KD    V++   L+ +++K    +S +E RR L+   I IN+  +
Sbjct: 312 AQEFDRLAEEIDKDVVIRVAKQTQLMEVLLK--LRSSKSEIRRLLQQGGILINDQKV 366


>gi|288553779|ref|YP_003425714.1| tyrosyl-tRNA synthetase [Bacillus pseudofirmus OF4]
 gi|288544939|gb|ADC48822.1| tyrosyl-tRNA synthetase [Bacillus pseudofirmus OF4]
          Length = 414

 Score =  134 bits (336), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 106/398 (26%), Positives = 196/398 (49%), Gaps = 30/398 (7%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAY-----IGYDLTASSLHAGHLTQLMLLFWL 63
           L IL +RG + +I+   EL     + V T       +G D +A  +H GH   L  L   
Sbjct: 19  LEIL-KRGVV-EITPEHELKKKIEKSVRTGKPLKVKLGMDPSAPDVHLGHTVPLHKLRQF 76

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT--GKT 121
           Q+ GH+   L+G  T  IGDP+ + E+R+ +  ++++ N        +   +YG      
Sbjct: 77  QELGHEIQMLIGDFTGRIGDPTGKSETRKQLSDEDVKRN------AMTYVEQYGKILDME 130

Query: 122 DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA 181
            A +  N  WL ++ + D++  + +  +V RML  +    R K  Q +S  EF Y ++Q 
Sbjct: 131 KATIYYNSEWLKALSFEDVIG-LSANMTVARMLERDDFEKRYKSGQPISIHEFFYPLMQG 189

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKT 240
           YD V L    +  +++GG+DQ  N++ G  L E     K  A+T PL+    G  KM K+
Sbjct: 190 YDSVAL----ESDIEVGGTDQKFNLLMGRTLQEAYGKEKQVAMTLPLIEGLDGERKMSKS 245

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK-LQGKEIN--E 297
           L+  I +++   SP   +    +I D  ++ + K  T +PM EI+ + + ++   ++  +
Sbjct: 246 LNNYIGIDE---SPNEIFGKSMSIPDELMIKYYKLATDIPMDEINALEEGIKNGSVHPRD 302

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
           AK  +  +   M HG++ A++A +     F        +P +  S ++    + ++ L+V
Sbjct: 303 AKMNLGAKFVEMYHGKDAADEAKSYFQTVFQKRTLPTDIPEVKWSGED---AVWVVELLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           +    +S  EARR +++  +K+N   + + + QIK++D
Sbjct: 360 ELKMMSSKGEARRMVQNGGVKVNEEKVEDVQAQIKIED 397


>gi|298530310|ref|ZP_07017712.1| tyrosyl-tRNA synthetase [Desulfonatronospira thiodismutans ASO3-1]
 gi|298509684|gb|EFI33588.1| tyrosyl-tRNA synthetase [Desulfonatronospira thiodismutans ASO3-1]
          Length = 400

 Score =  133 bits (335), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 115/408 (28%), Positives = 178/408 (43%), Gaps = 36/408 (8%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG +  +S    L  +  +  +    G+D TA  LH GH   +  L   Q+ GH  +
Sbjct: 11  LIRRGSVEIVSESELLKKMDRKKPLRVKAGFDPTAPDLHLGHTVLIQKLKHFQELGHHVL 70

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T +IGDPS + E+R+ +  QE+ +N E  K     F      KT+  ++ N TW
Sbjct: 71  FLIGDFTGMIGDPSGKSETRKKLTRQEVIQNAETYKR--QIFRILHPEKTE--LVFNSTW 126

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +      D + E+ S ++V RM+  +    R +  +S++  EF Y ++Q YD VEL  + 
Sbjct: 127 MDKFHAADFV-ELCSRYTVARMMERDDFDKRFRENRSIAVHEFLYPLIQGYDSVELKAD- 184

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G DL           LT P+L    G  KM K+L   + + + 
Sbjct: 185 ---VELGGTDQKFNLLVGRDLQREYGQEPQVILTVPILEGLDGVQKMSKSLDNYVGIEEP 241

Query: 251 MTSPYN---------FWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKI 301
               Y           W+Y+  + D ++           M E     +L  K   E    
Sbjct: 242 ARDMYGKLMSISDELMWRYFELLSDKNLNDIE------AMRENVEQGRLHPKYCKEE--- 292

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGF 361
           +A EIT   H R+ AEK        F      Q MP  S+S  E  R   L  ++V++  
Sbjct: 293 LAMEITARFHDRQAAEKERENFNRVFSAHEMPQDMPEFSVSPAENKR---LADILVESRL 349

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
             S +EA+R  +  A+ + N     EKL      F   G   L  GKK
Sbjct: 350 CPSRSEAKRLCRQKAVGLYNG----EKLTDPEAVF-GAGEYTLKVGKK 392


>gi|225847897|ref|YP_002728060.1| tyrosyl-tRNA synthetase [Sulfurihydrogenibium azorense Az-Fu1]
 gi|225643257|gb|ACN98307.1| tyrosyl-tRNA synthetase [Sulfurihydrogenibium azorense Az-Fu1]
          Length = 403

 Score =  133 bits (334), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 114/387 (29%), Positives = 192/387 (49%), Gaps = 30/387 (7%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L ++G +  IS    LD L     +    G+D TA  LH GH   L  L   Q+ GH   
Sbjct: 10  LIKKGTLEIISEEELLDKLKEGRPLIVKAGFDPTAPDLHLGHTVLLQKLRTFQQLGHTVY 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            ++G  T++IGDPS RD++R  +  Q++ EN +  K     F      KT  +++ N +W
Sbjct: 70  FIIGDFTAMIGDPSGRDQTRPPLTKQQVLENAKTYKE--QVFKVLDPEKT--VVVFNSSW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L  +K  DL++ + + ++V RML  E  + R K    +S  EF Y +LQAYD V +  + 
Sbjct: 126 LGEMKAEDLIK-LTAKYTVARMLEREDFKKRFKENIPISIHEFIYPLLQAYDSVAIKAD- 183

Query: 192 DCRLQMGGSDQWGNIICGIDLGER--LKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLN 248
              +++GGSDQ  N++ G D+ +   ++ P++ A+  PLL    G  KM K+    I + 
Sbjct: 184 ---VELGGSDQRFNLLIGRDIQKEYGIEKPQV-AILLPLLVGTDGVKKMSKSYGNYIGIT 239

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK-LQGKEIN--EAKKIIATE 305
           +    P + +    +I D  +  + + LT L + EID+M K ++   ++  E KK +A  
Sbjct: 240 E---PPEDMFGKVMSISDELMWQYWELLTDLTVEEIDKMKKDVESGVLHPMEVKKQLAMY 296

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQH-----MPTISISKDEV-SRGMGLLTLIVKA 359
           I    H ++    +A  A E F+  +HS+      +P I++    +  + + L  LI   
Sbjct: 297 IVERFHDKD----SAIKAKEHFE-KVHSKKEIPDDIPVINVKDLNIEDKEIELFELIYLL 351

Query: 360 GFATSTNEARRHLKSNAIKINNSIISN 386
             A S  EA+R +K   +KI+   + +
Sbjct: 352 NLAPSKAEAKRLIKQGGVKIDGEKVDD 378


>gi|269122410|ref|YP_003310587.1| tyrosyl-tRNA synthetase [Sebaldella termitidis ATCC 33386]
 gi|268616288|gb|ACZ10656.1| tyrosyl-tRNA synthetase [Sebaldella termitidis ATCC 33386]
          Length = 404

 Score =  133 bits (334), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 101/352 (28%), Positives = 176/352 (50%), Gaps = 21/352 (5%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D T + LH GH   L  L   Q+ GH    L+G  T+ IGDP+ + E+R+M+  ++I
Sbjct: 45  LGIDPTGTDLHIGHAVPLRKLKQFQELGHTVQFLIGTFTARIGDPTGKSETRKMLTPEDI 104

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           Q+NI     +   F+   + KT+  +L N  WL  +   D L  + S F+V +M+S E  
Sbjct: 105 QKNIATY--LEQVFLILDSEKTE--ILYNADWLEKLSLQDFLG-LLSQFTVAQMISREDF 159

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             RL   + +S +EF Y ILQ YD V +     C +++G ++Q  NI+ G DL +     
Sbjct: 160 AKRLAENKPVSLVEFMYPILQGYDSVAMK----CDIELGATEQKFNILKGRDLQKNFGMD 215

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               +  P+L    G  KM K+L+  I +     +P + +    +I D  +  + + +T 
Sbjct: 216 PQICMLLPILEGLDGVEKMSKSLNNYISIT---DTPNDMFGKIMSISDDLMFRYYEIITD 272

Query: 279 LPMSEIDRM-AKLQGKEIN--EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQH 335
           +P+ EI ++ A ++   ++  E KK + +E+  + H +EE  KA       F        
Sbjct: 273 IPLEEIAQLKADMENGTLHPMEIKKRLGSEVVAIYHNKEEGLKAREWFENVFSKKNLDVE 332

Query: 336 MPTISISKDEVSRGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISN 386
           +P + +   E     G++ ++VK     +ST+EARR ++   +KIN+  + +
Sbjct: 333 LPEVELEYTET----GVIDILVKHLNLLSSTSEARRLIQQGGLKINDEPVKD 380


>gi|169836866|ref|ZP_02870054.1| tyrosyl-tRNA synthetase [candidate division TM7 single-cell isolate
           TM7a]
          Length = 407

 Score =  133 bits (334), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 102/360 (28%), Positives = 177/360 (49%), Gaps = 21/360 (5%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D T S LH GH   L  L   Q  GH    L+G  T  IGDP+ + E+R+M+  +++
Sbjct: 48  LGIDPTGSDLHLGHAVPLRKLKQFQDLGHDVFFLIGTFTGRIGDPTGKSETRKMLSEEQV 107

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
            ENI+     +   +K         ++ N  WL  +   D L  + S F+V++M+S E  
Sbjct: 108 MENIK----TYLDQVKLILDLDKINVVYNADWLEKLSLSDALN-LLSQFTVSQMISREDF 162

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             RL   + +S +EF Y ILQ YD VEL  +    +++G ++Q  N++ G DL +     
Sbjct: 163 SKRLSENKPVSLIEFMYPILQGYDSVELHAD----VELGATEQKFNLLRGRDLQKNFGQE 218

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
           +   +  P+L    G  KM K+L   I +     +P + +    +I D  + ++   +T 
Sbjct: 219 QQICMIMPILVGLDGVEKMSKSLGNYIGVK---DTPNDMFGKVMSISDELMENYYTMITD 275

Query: 279 LPMSEIDRM-AKLQGKEIN--EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQH 335
           +P  +I+ + A++    ++  EAKK +  E+  + +G E A++A       F     +  
Sbjct: 276 VPFEKIEEIKAQIADGSLHPMEAKKQLGAEVVKIYYGEEAAKEARDWFENVFSKRNLNVD 335

Query: 336 MPTISISKDEVSRGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
           +P + +   EV    G++ L+VK  G   +T+EARR ++    KIN+  I + K  + L+
Sbjct: 336 LPEVELEYKEV----GIIDLLVKETGLMKTTSEARRLIQQGGFKINDEPIKDVKATVVLE 391


>gi|56461336|ref|YP_156617.1| tyrosyl-tRNA synthetase [Idiomarina loihiensis L2TR]
 gi|81362512|sp|Q5QVP5|SYY_IDILO RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|56180346|gb|AAV83068.1| Tyrosyl-tRNA synthetase [Idiomarina loihiensis L2TR]
          Length = 401

 Score =  133 bits (334), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 104/367 (28%), Positives = 187/367 (50%), Gaps = 27/367 (7%)

Query: 30  LCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDE 89
           L S   +T   G+D TA  LH GH   +  L   Q  GHK + L+G  T +IGDP+ ++ 
Sbjct: 29  LASGKPLTVKAGFDPTAPDLHLGHTVLINKLRVFQDFGHKVVFLIGDFTGMIGDPTGKNV 88

Query: 90  SRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFS 149
           +R+ + ++++  N E  K     F      KT+ +  N+E W+  +   D+++ + +  +
Sbjct: 89  TRKPLTTEQVIANAETYKE--QVFKILDPAKTE-IRFNSE-WMSKMGAADMIK-LAARQT 143

Query: 150 VNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICG 209
           V RML  +  + R +  QS++  EF Y ++Q +D VEL  +    +++GG+DQ  N++ G
Sbjct: 144 VARMLERDDFKKRYQNNQSIAIHEFLYPLVQGWDSVELKAD----VELGGTDQRFNLLMG 199

Query: 210 IDL----GERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYN-FWQYWRN 263
            +L    G+R +T     + +PLL    G  KM K+L+  I +    T P N  +    +
Sbjct: 200 RELQKEEGQRPQT----VIMTPLLEGLDGVQKMSKSLNNYIGI----TEPANDMFGKIMS 251

Query: 264 IDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKKIIATEITTMVHGREEAEKAAT 321
           + D  +  + + L+   ++EID +  A   GK   + K ++A EI    H  ++AEKA  
Sbjct: 252 VSDELMWRYFQLLSFRSITEIDELKAAVADGKNPRDVKVLLAKEIIARFHSEDDAEKAEQ 311

Query: 322 AAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINN 381
             ++ F  +     +P  ++     + GM +  ++ +AG   ST+EA R +K NA+K++ 
Sbjct: 312 DFIQRFQKNALPDDIPEKTVQVG--AEGMAIGNVLKEAGLVESTSEALRMIKQNAVKVDG 369

Query: 382 SIISNEK 388
              S+ +
Sbjct: 370 EKFSDSR 376


>gi|297183411|gb|ADI19544.1| tyrosyl-tRNA synthetase [uncultured gamma proteobacterium
           HF0770_27E13]
          Length = 404

 Score =  132 bits (333), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 114/405 (28%), Positives = 190/405 (46%), Gaps = 34/405 (8%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           IL E+ F  +    + L I          +G+D TA  LH GH   +  +   Q+ GH+ 
Sbjct: 18  ILVEKEFAKRFHQKKPLKI---------KVGFDPTAPDLHLGHTVIINKMRQFQEFGHEI 68

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKI-KGIFSSFIKYGTGKTDALMLNNE 129
           I L+G  T +IGDPS  +E+R ++  ++I +N     K IF    K  T      +  N 
Sbjct: 69  IFLIGDFTGMIGDPSGVNETRPVLTREQIDKNAATYEKQIFKILDKDLTR-----IEFNS 123

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
           +W+  +    L+ EI S ++V RML  +  + R K    +S  E  Y ++QAYD V L  
Sbjct: 124 SWMQQVDSSKLI-EIASKYTVARMLERDDFKQRFKTGNPISIHELLYPLVQAYDSVAL-- 180

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLN 248
             +  +++GG+DQ  N++ G  L +    P   A+T PLL    G  KM KT +  I L 
Sbjct: 181 --EVDVELGGTDQKFNLLVGRHLQQLYGQPPQTAITLPLLEGLDGVKKMSKTANNYIALT 238

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIATEI 306
                P +      +I D  +  + + L+   + EI  + K   +GK   + K ++A EI
Sbjct: 239 ---DHPKDMLGKIMSISDELMWRYFELLSARSIDEIGLLQKQVKKGKNPRDIKFLLAEEI 295

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLT---LIVKAGFAT 363
               HG++ +  A  + +  F      + + ++SI+  EV    G++    L+  A   T
Sbjct: 296 VERFHGKQSSSDAKESFLRQFQQGQIPEEIKSVSINYSEVESEPGIVNMAKLLYSANLVT 355

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGK 408
           S +E  R +K+ ++++    I + +LQ+     D+     LSFGK
Sbjct: 356 SVSEGHRAIKAGSVRLEGEKIESSQLQM-----DANSKHILSFGK 395


>gi|295105726|emb|CBL03269.1| tyrosyl-tRNA synthetase [Gordonibacter pamelaeae 7-10-1-b]
          Length = 403

 Score =  132 bits (332), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 111/355 (31%), Positives = 170/355 (47%), Gaps = 25/355 (7%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  L   Q  GH    ++G GT++IGDPS R+ +R  + S++I
Sbjct: 38  LGVDPTAPDIHLGHAVPLRKLRQFQDLGHGVTLIIGDGTALIGDPSGRNSTRPQLTSEQI 97

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           + N +    +  +F      KT  L  N+E WL S+    LL+ + S F+V R+L  +  
Sbjct: 98  KANAQTY--VDQAFKILDPEKT-TLRYNSE-WLLSLNMEGLLK-LASNFTVARILERDDF 152

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
            +R    Q +S  EF Y ++QAYD V +    +  +++GG+DQ  N++ G +L E++   
Sbjct: 153 HNRYTNSQPISLHEFLYPLMQAYDSVVI----EADVELGGTDQLFNLLAGRELMEKMGME 208

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               LT PLL    G  KM K+    I L  E   P + +    +I D  +V + +  + 
Sbjct: 209 PQVCLTLPLLEGTDGVQKMSKSYGNYIGLTDE---PADMFGKVMSIPDELMVKYYRLASA 265

Query: 279 LPMSEIDRMAK-LQGKEI--NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQH 335
           LP+ EID + + L   E+  N+ K+ +A  I          E AA AA E FD+      
Sbjct: 266 LPVDEIDEIERGLAADELHPNKVKRALAQNIVAAY----YDEAAAQAAEEQFDLVFKQHA 321

Query: 336 MP--TISISKDEVSRGMG---LLTLIVKAGFATSTNEARRHLKSNAIKINNSIIS 385
           +P      + D      G   L  LI  AG A S  EARR +    +K+N   + 
Sbjct: 322 VPDDIPEFAADLAPNDEGTVYLAKLIADAGLAASAGEARRLIDGGGVKVNGEPVP 376


>gi|312128010|ref|YP_003992884.1| tyrosyl-tRNA synthetase [Caldicellulosiruptor hydrothermalis 108]
 gi|311778029|gb|ADQ07515.1| tyrosyl-tRNA synthetase [Caldicellulosiruptor hydrothermalis 108]
          Length = 396

 Score =  132 bits (332), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 117/412 (28%), Positives = 201/412 (48%), Gaps = 34/412 (8%)

Query: 3   AFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
            FK     I++E   + ++   R L+I          +G D     +H GH   L  L  
Sbjct: 9   VFKKGAAEIITEEELVEKLKQDRPLNI---------KLGLDPNVPDVHLGHAVVLRKLKQ 59

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD 122
           LQ  GH  I ++G  T++IGDP+ + E+R+ +  +E+Q+N E  K      +K    +  
Sbjct: 60  LQDLGHNIILIIGDFTAMIGDPTGKSETRKQLTKEEVQKNAEPFK---QQVLKILDPQKT 116

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
            +  N+E WL  + ++D++  + S ++V RML  E+ R R+++   LS  EF Y ++Q Y
Sbjct: 117 TIRHNSE-WLEPMNFLDVIN-LASKYTVARMLERETFRQRMEKNLPLSIHEFFYPLMQGY 174

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL--KTPKLFALTSPLLTTASGT-KMGK 239
           D V +    +  +++G ++Q  NI+ G  L +    KT ++ AL  P+L    G  KM K
Sbjct: 175 DSVVI----EADVELGATEQKFNILMGRTLQKEYGCKTIQV-ALLMPILVGTDGVNKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA-KLQGKEIN-- 296
           +L   I +N+    P   +    +I D  ++S+ +  T L   EI+ +  KL+   ++  
Sbjct: 230 SLGNYIGINE---PPNVMYGKVMSIPDEIMISYYELTTDLEPEEIEEIKRKLEEGTLHPR 286

Query: 297 EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLI 356
           +AK  +A EI  + HG E A KA    +  F        +P + ++  +V     L   +
Sbjct: 287 DAKMRLAREIVKLYHGEEAALKAEEEFIRVFQKKDVPDDIPEVELANVKVY----LPRFM 342

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGK 408
           V+    +ST+E  R +KS  +K+N   +S  +L I+ +D D     KL F K
Sbjct: 343 VENKLCSSTSEGMRLIKSGGVKLNGQKVS--ELDIEFKDGDVLQVGKLKFVK 392


>gi|288818270|ref|YP_003432618.1| tyrosyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
 gi|288787670|dbj|BAI69417.1| tyrosyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
 gi|308751867|gb|ADO45350.1| tyrosyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
          Length = 393

 Score =  132 bits (332), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 109/373 (29%), Positives = 176/373 (47%), Gaps = 28/373 (7%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   L  +   Q+ GH+   ++G  T++IGDP+ R E+R  +  +++ 
Sbjct: 38  GFDPTAPDLHLGHTVLLQKMRTFQQLGHEVYFVIGDFTAMIGDPTGRLETRPPLTREQVI 97

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           EN +  +     F      KT+ +   N TWL ++    +++  G  ++V RML  +   
Sbjct: 98  ENAKTYE--HQVFKVLDPEKTNIVF--NSTWLSTLGTEGVIKLAGK-YTVARMLERDDFS 152

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R K    +   EF Y +LQ YD V L  +    +++GG+DQ  N++ G DL        
Sbjct: 153 KRFKEGIPIYIHEFLYPLLQGYDSVFLKAD----VELGGTDQKFNLLVGRDLQREAGLEP 208

Query: 221 LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTL 279
              +T PLL    G  KM K+    I L ++   PY  +    +I D  +  +   LT  
Sbjct: 209 QVCITLPLLVGLDGVRKMSKSYGNYIGLTED---PYTMFGKTMSISDQLMWEYYTLLTDY 265

Query: 280 PMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI 339
              EI+R+ +L      EAKK +A  I +  H +EEA++A       F      +  P I
Sbjct: 266 TQEEIERIKELHP---MEAKKRLAHYIVSRYHSKEEADRALDNFERTFSKREFPEDAPVI 322

Query: 340 SISKDEVSRGM--GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
                +V RG+      L+ + G  +S N ARR ++   +KIN   I +E  +I++++  
Sbjct: 323 -----KVERGLKRKAYELLYELGIESSKNSARRVIQGGGLKINFQKIEDENQEIEIKE-- 375

Query: 398 STGNIKLSFGKKN 410
               +KL  GKK 
Sbjct: 376 ---ELKLQVGKKR 385


>gi|256826687|ref|YP_003150646.1| tyrosyl-tRNA synthetase [Cryptobacterium curtum DSM 15641]
 gi|256582830|gb|ACU93964.1| tyrosyl-tRNA synthetase [Cryptobacterium curtum DSM 15641]
          Length = 403

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 118/407 (28%), Positives = 187/407 (45%), Gaps = 38/407 (9%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
            KS    I+ E   + ++   R L+I          +G D TA  +H GH   L  L   
Sbjct: 11  IKSGTAQIVPEEALLEKLKRDRPLNI---------KLGVDPTAPDIHIGHAVPLRKLRTF 61

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q  GH+   ++G GT++IGDPS R+ +R  + S E+  N +    I  +F      KT  
Sbjct: 62  QDLGHQVTLIIGDGTALIGDPSGRNSTRPQLTSDEVAANAQTY--IDQAFKILDPQKT-- 117

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            + +N  WL  +    LL+ I S F+V R+L  +   +R  +   +S  EF Y I+QAYD
Sbjct: 118 TLRHNAEWLLDLNLEGLLK-IASNFTVARILERDDFHNRYTQNLPISVHEFLYPIMQAYD 176

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLS 242
            V +    D  +++GG+DQ  N++ G +L E++       LT PLL    G  KM K+  
Sbjct: 177 SVVI----DADVELGGTDQLFNLLAGRELMEKMGKEPQVCLTLPLLEGTDGVRKMSKSYG 232

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK-LQGKEI--NEAK 299
             I L        + +    +I D  +V + +  +T  + EIDR+ + L    +  N+ K
Sbjct: 233 NYIGLTDAAD---DMFGKVMSIPDELMVKYYRLASTESVDEIDRLEEGLAAGSLHPNQVK 289

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMP------TISISKDEVSRGMGLL 353
           + +A  I    HG    + AA  A   FD    +  MP      T S+  DE  +GM  L
Sbjct: 290 RALARNIVAAYHG----DLAAIEAEVSFDRLFKNHDMPEDIPMFTGSLQPDE--QGMVYL 343

Query: 354 TLIV-KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDST 399
             ++ +A  A S  E RR +    +K+N + ++ +  QI   D +  
Sbjct: 344 PKVLHEASLAKSAGEGRRLIDGGGVKVNGTPLAAKSYQIAAGDLEGA 390


>gi|225849740|ref|YP_002729974.1| tyrosyl-tRNA synthetase [Persephonella marina EX-H1]
 gi|225645311|gb|ACO03497.1| tyrosyl-tRNA synthetase [Persephonella marina EX-H1]
          Length = 410

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 116/390 (29%), Positives = 189/390 (48%), Gaps = 53/390 (13%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   L  L   Q+ GH    ++G  T++IGDPS RD++R  +  +++ 
Sbjct: 41  GFDPTAPDLHLGHTVLLQKLRTFQQLGHTVYFIIGDFTAMIGDPSGRDKTRPPLTKEQVL 100

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           EN +  K       K    +   ++ N+E WL  +   DL++ + + ++V RML  +  +
Sbjct: 101 ENAKTYK---EQVFKVLDPEKTVVVFNSE-WLGDMTAQDLIK-LTARYTVARMLERDDFK 155

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER--LKT 218
            R K  + ++  EF Y +LQAYD V +  +    +++GGSDQ  N++ G D+ +   ++ 
Sbjct: 156 KRFKENKPIAIHEFIYPLLQAYDSVAIKAD----VELGGSDQRFNLLIGRDIQKEYGIEK 211

Query: 219 PKLFALTSPLLTTASGT-KMGKTLSGAIWLN--------KEMTSPYNF-WQYWRNIDDAD 268
           P++ A+  PLL    G  KM K+    I +         K M+ P +  W YW       
Sbjct: 212 PQV-AILLPLLVGTDGVRKMSKSYGNYIGITEPPEEMFGKLMSIPDDLMWDYW------- 263

Query: 269 VVSFAKRLTTLPMSEIDRMAKLQGKE----INEAKKIIATEITTMVHGREEAEKAATAAM 324
                + LT L + EI++M K+  +E      E KK +A  I T  H     E++A  A 
Sbjct: 264 -----ELLTDLSIEEIEKM-KMDVEEGVLHPMEVKKQLAMYIVTRFHD----EESAIKAR 313

Query: 325 ECFDMSIHSQHMPTISISKDEVSRG----MGLLTLIVKAGFATSTNEARRHLKSNAIKIN 380
           E F+  +HS+      I + E+       + L  L+ K GFA S +EARR +K  A+KI+
Sbjct: 314 EHFE-RVHSKREIPEEIPEPEIIVATEGKIPLYELVFKTGFAPSKSEARRLIKGGAVKID 372

Query: 381 NSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
               ++   ++     D T    L  GK+ 
Sbjct: 373 GEKFTDPYFEV-----DLTKEFVLQVGKRK 397


>gi|146296490|ref|YP_001180261.1| tyrosyl-tRNA synthetase [Caldicellulosiruptor saccharolyticus DSM
           8903]
 gi|145410066|gb|ABP67070.1| tyrosyl-tRNA synthetase [Caldicellulosiruptor saccharolyticus DSM
           8903]
          Length = 396

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 110/374 (29%), Positives = 189/374 (50%), Gaps = 23/374 (6%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D     +H GH   L  L  LQ  GH  I ++G  T++IGDP+ + E+R+ +  +E+
Sbjct: 37  LGLDPNVPDVHLGHAVVLRKLKQLQDLGHNIILIIGDFTAMIGDPTGKSETRKQLTKEEV 96

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           Q+N E  K      +K    +   +  N+E WL  + ++D++  + S ++V RML  E+ 
Sbjct: 97  QKNAEPFK---EQVLKILDPQKTTIRYNSE-WLEPMNFLDVIN-LASKYTVARMLERETF 151

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
           R R+++   LS  EF Y ++Q YD V +    +  +++G ++Q  NI+ G  L +   + 
Sbjct: 152 RQRMEKNLPLSIHEFFYPLMQGYDSVVI----EADVELGATEQKFNILMGRTLQKEYGSK 207

Query: 220 KL-FALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT 277
            +  AL  P+L    G  KM K+L   I +N+    P   +    +I D  ++S+ +  T
Sbjct: 208 TIQVALLMPILVGTDGVNKMSKSLGNYIGINE---PPNIMYGKVMSIPDEIMISYYELTT 264

Query: 278 TLPMSEIDRMA-KLQGKEIN--EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQ 334
            L   EI+ M  KL+   ++  +AK  +A EI  + HG E A+KA    +  F       
Sbjct: 265 DLEPEEIEEMKRKLEEGTLHPRDAKMRLAREIVKLYHGEEAAKKAEEEFIRVFQKKDVPD 324

Query: 335 HMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
            +P + ++  +V     L   +V+    +ST+E  R +KS A+K+N   ++  +L I+LQ
Sbjct: 325 DIPEVELANAKVY----LPRFMVENKLCSSTSEGMRLIKSGAVKLNGEKVN--ELDIELQ 378

Query: 395 DFDSTGNIKLSFGK 408
           + D     KL F K
Sbjct: 379 NGDVLQVGKLKFVK 392


>gi|291288189|ref|YP_003505005.1| tyrosyl-tRNA synthetase [Denitrovibrio acetiphilus DSM 12809]
 gi|290885349|gb|ADD69049.1| tyrosyl-tRNA synthetase [Denitrovibrio acetiphilus DSM 12809]
          Length = 402

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 116/408 (28%), Positives = 182/408 (44%), Gaps = 40/408 (9%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           I+SE   + +++   E D       +    G+D TA  LH GH   +  L   Q  GHK 
Sbjct: 18  IISEEDLLKKLTKSYETDT-----PLRVKAGFDPTAPDLHLGHTVLIQKLKHFQDLGHKI 72

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           I L+G  T +IGDPS ++E+R+ +  +++  N E  K     F      KT+     N  
Sbjct: 73  IFLIGDFTGMIGDPSGKNETRKALTREDVLANAETYKE--QVFKILDPEKTEVAF--NSV 128

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           W+  +   D++R + S ++V RML  +    R K  + +S  EF Y ++Q YD V L  +
Sbjct: 129 WMKDMSASDMIR-LTSHYTVARMLERDDFSKRYKENRPISIHEFIYPLIQGYDSVALKSD 187

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNK 249
               ++MGG+DQ  N++ G DL          ALT P+L    G  KM K+L   I + +
Sbjct: 188 ----VEMGGTDQKFNLLVGRDLQRAYGQAPQIALTMPILEGLDGVQKMSKSLGNYIGITE 243

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG---KEINEAKKIIATEI 306
              SP + +    +I D  +  +   L+   + +I+ + +      K   + KK +A EI
Sbjct: 244 ---SPKDMFGKVMSITDELMFRYYLLLSDRSLEDINILKQSVADGSKHPMDVKKELAMEI 300

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG--FATS 364
               H  E A++A     + F    +   MP   I  D     + L+ +I K G  F  S
Sbjct: 301 VARFHSEEAAKEAREGFEQVFSKRENPDEMPEYKIGTD-----VKLIDVITKNGLNFLPS 355

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS---TGNIKLSFGKK 409
            +EARR  K   I I+           K++D D     G   L  GK+
Sbjct: 356 NSEARRLAKQGGIYIDGD---------KVEDIDQCLHAGQYVLKVGKR 394


>gi|159027684|emb|CAO89549.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 405

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 98/350 (28%), Positives = 164/350 (46%), Gaps = 21/350 (6%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D T S +H GH      L   Q  GH  + ++G  T+ IGDP+ + E R+ + S+E+
Sbjct: 46  LGIDPTGSDIHLGHSIPFRKLRAFQDAGHVAVVIIGDFTARIGDPTGKSEVRKQLTSEEV 105

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           + N E         + + T     +  N+E WL  +    +L E+ S  +V +ML+ E  
Sbjct: 106 RANAENYLAQLRPILDFNTPNRLEIRYNSE-WLGKLDLSQIL-ELLSTMTVGQMLAKEGF 163

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R  RE  +   EF Y ++Q YD V +    +  +++GG+DQ  NI  G DL +     
Sbjct: 164 SERYDRENPIFLHEFLYPLMQGYDSVAV----EADVELGGTDQKFNIAVGRDLQKYFGKK 219

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
             F L  P+L    G+ KM K+L+  + L +   S Y+  +      DA +  + + LT 
Sbjct: 220 PQFGLLLPILIGTDGSQKMSKSLNNYVGLRESALSMYSKLE---KTPDALLKDYYELLTN 276

Query: 279 LPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECF--DMSIHSQHM 336
           LP+         +     EA+K +A E+    HG EEA  A   A E      +  +  +
Sbjct: 277 LPLDA-------RASNPREAQKQLAIEVVAQFHGTEEAFNAQKTAQEIVLQGNTAAAASV 329

Query: 337 PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISN 386
           P  S++   V+  + L  L+   G   S+ E RR ++  A++I++  I++
Sbjct: 330 PEFSLAA--VTFPLKLFYLLSATGLCKSSGEGRRQIQGGAVRIDSEKITD 377


>gi|305433122|ref|ZP_07402278.1| tyrosine--tRNA ligase [Campylobacter coli JV20]
 gi|304443823|gb|EFM36480.1| tyrosine--tRNA ligase [Campylobacter coli JV20]
          Length = 401

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 119/378 (31%), Positives = 184/378 (48%), Gaps = 36/378 (9%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   L  + +LQK G     L+G  T  IGDPS +  +R+ +  +++ 
Sbjct: 42  GFDPTAPDLHLGHSVVLTKMAYLQKHGAIVQFLIGDFTGQIGDPSGKSVTRKKLDKEQVL 101

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           +N    K       K    +   L  N++ WL  +    ++ E+ S FSV RML  +   
Sbjct: 102 QN---AKTYEEQVFKILDPQKTQLKFNSQ-WLNELGATGIV-ELTSTFSVARMLERDDFT 156

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R K +  +S  EF Y +LQ YD V L     C ++MGG+DQ  N++ G  L       K
Sbjct: 157 KRFKEQSPISICEFLYPLLQGYDSVALK----CDIEMGGTDQKFNLLMGRTLQRIYNIGK 212

Query: 221 LFA-LTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
             A +  PLL    G  KM K+L   I + ++     + +    +I D  +  + + L+T
Sbjct: 213 EQAVMMMPLLEGLDGVNKMSKSLGNYIGVTEKAN---DMYAKILSISDELMWRYYELLST 269

Query: 279 LPMSEIDRMAKLQGKEINE-------AKKIIATEITTMVHGREEAEKAATAAMECFDMSI 331
             + EI+ M     KEI+        AK+ +A EITT  H  EE+ KAA A    FD S+
Sbjct: 270 KSLEEIENMK----KEISSGNLHPKLAKENLALEITTRFH-NEESAKAAKAE---FD-SV 320

Query: 332 HSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
           HS +     I + E+   + L   +V+ G   ST+ ARR + +NA+ +N+  +S+E++Q+
Sbjct: 321 HSGNALPSDIKEFEIEGEIWLAKALVECGLENSTSAARRSINANAVSVNSQKVSDEQMQL 380

Query: 392 KLQDFDSTGNIKLSFGKK 409
                  TG   L  GK+
Sbjct: 381 ------GTGEYILQVGKR 392


>gi|260914249|ref|ZP_05920722.1| tyrosine-tRNA ligase [Pasteurella dagmatis ATCC 43325]
 gi|260631882|gb|EEX50060.1| tyrosine-tRNA ligase [Pasteurella dagmatis ATCC 43325]
          Length = 395

 Score =  132 bits (331), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 108/409 (26%), Positives = 190/409 (46%), Gaps = 28/409 (6%)

Query: 6   SDFLSILSE--RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           +D  ++L+E  RG    +S    ++ L     +   +G D TA  +H GH   L  L   
Sbjct: 2   TDINTVLAELKRGVDEVLSEADLIEKLKENRPLRVKLGADPTAPDIHLGHTVVLNKLRQF 61

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q+ GH+ I L+G  T ++GDPS ++ +R  +  +++  N E  K      +     +   
Sbjct: 62  QQFGHEVIFLIGDFTGMVGDPSGKNSTRPPLSREDVLRNAETYKQQIYKILDPQKTR--- 118

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            ++ N +WL  +    ++R + S ++V RML  +  + R    Q ++  EF Y +LQ YD
Sbjct: 119 -IVFNSSWLGELGTEGMIR-LTSNYTVARMLERDDFKKRFANNQPIAIHEFIYPLLQGYD 176

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLS 242
            V L    +  +++GG+DQ  N++ G +L +        A+T PLL    G  KM K+L 
Sbjct: 177 SVAL----EADIELGGTDQKFNLLVGRELQKSAGQKPQVAITLPLLVGLDGEKKMSKSLG 232

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKK 300
             I + +   +P   +    +I D  +  +   L+  P++EI+++ +    G+   + K 
Sbjct: 233 NYIGVTE---TPSEMFGKIMSISDDLMWDWYNLLSFRPLTEIEQLKQEVENGRNPRDVKV 289

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           ++A EI +  H   +AE A    +  F        MP  +   +     MGL  L+ +A 
Sbjct: 290 LLAKEIISRFHSNTDAEAAEQEFINRFQKGAIPDEMPEFTFEGE-----MGLANLLKEAS 344

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
              ST+EA R ++   +KI+   + + KL I      STG      GK+
Sbjct: 345 LVVSTSEANRMVQQGGVKIDGHKVEDAKLII------STGTSVYQVGKR 387


>gi|108804150|ref|YP_644087.1| tyrosyl-tRNA synthetase [Rubrobacter xylanophilus DSM 9941]
 gi|108765393|gb|ABG04275.1| tyrosyl-tRNA synthetase [Rubrobacter xylanophilus DSM 9941]
          Length = 388

 Score =  132 bits (331), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 101/377 (26%), Positives = 182/377 (48%), Gaps = 37/377 (9%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  L   Q  GH  + ++G  T+ +GDPS R ++R ++  ++I
Sbjct: 37  LGMDPTAPDIHLGHAVVLGKLRRFQDLGHTAVLVIGDYTARVGDPSGRSKTRPVLSPEQI 96

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           +EN      +  ++      +T+  + +N  WL  +   D++R +    +V R+L  +  
Sbjct: 97  RENTRTY--LEQAYRVLDEARTE--VRHNSEWLAPLALADIIR-LTRAATVARILERDDF 151

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL-KT 218
             R      ++  E  Y ++QAYD V +    D  +++GG+DQ  N++ G  + E   K 
Sbjct: 152 AKRYAAGDPITLTELLYPLMQAYDSVAI----DADVELGGTDQLYNLLMGRHVMEYYGKR 207

Query: 219 PKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT 277
           P+   LT+PLL    G  KM K+L   I +++    P   +    +I D  +  +   + 
Sbjct: 208 PQCI-LTTPLLVGTDGRMKMSKSLGNYIGVSE---PPQEMFGKAMSIPDEAMPDYYTLVL 263

Query: 278 TLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIH---SQ 334
             PM E          E  E K+ +A  I  M HG    E+AA  A   FD  +      
Sbjct: 264 GRPMPE---------AEPVEQKRELARGIVRMFHG----EEAAREAERHFDTVVRRGVPD 310

Query: 335 HMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
            +P +++     +  + ++ LI +AGFA + NEARR ++  A++IN  ++ +E++ +  +
Sbjct: 311 DVPDVALPD---AGEVWIVDLITRAGFAATNNEARRFVRGRAVRINGEVVEDERVSLPTE 367

Query: 395 DFDSTGNIKLSFGKKNH 411
           +   +G + L  GK+ +
Sbjct: 368 EL--SGAV-LQVGKRRY 381


>gi|78222398|ref|YP_384145.1| tyrosyl-tRNA synthetase [Geobacter metallireducens GS-15]
 gi|115305806|sp|Q39WF4|SYY_GEOMG RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|78193653|gb|ABB31420.1| tyrosyl-tRNA synthetase [Geobacter metallireducens GS-15]
          Length = 403

 Score =  132 bits (331), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 103/373 (27%), Positives = 182/373 (48%), Gaps = 23/373 (6%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   L  +   Q+ GH+   L+G  T +IGDP+ + E+R+ +  +++ 
Sbjct: 42  GFDPTAPDLHLGHTVLLHKMRQFQQLGHEVCFLIGDFTGMIGDPTGKSETRKALTREDVL 101

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           +N E  K       K    K   ++ N+E WL  +   D++  + +  +V RML  +   
Sbjct: 102 KNAETYK---EQVFKILDPKKTRVVFNSE-WLGKMTASDMI-GLAAQSTVARMLERDDFG 156

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R   +  +S  EF Y ++Q YD V L  +    +++GG+DQ  N++ G +L    K   
Sbjct: 157 KRFANQLPISIHEFLYPLIQGYDSVALKAD----VELGGTDQKFNLLVGRELQRVWKQSP 212

Query: 221 LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTL 279
              +T PLL    G  KM K+L   I +N+        +    +I D  ++ + + L+ L
Sbjct: 213 QSVITMPLLEGLDGVNKMSKSLGNYIGINEPADE---IFGKIMSISDELMLRYYELLSDL 269

Query: 280 PMSEIDRM-AKLQGKEINE--AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM 336
            ++EI+++ A ++  +++   AKK +A EI    HG   A+ A  + +  F  +   + M
Sbjct: 270 TLAEIEKLKAAMRDGDVHPMAAKKQLAREIVARYHGAVAADNAEESFVRRFRDNQTPEEM 329

Query: 337 PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
           P   +S +E    +G   L+ +AG   S +E RR +    +K+N   ++N+ L++     
Sbjct: 330 PECILSAEEGKVLLG--RLLAEAGLVKSNSEGRRAINQGGVKVNGEKVTNDMLELP---- 383

Query: 397 DSTGNIKLSFGKK 409
              G   L FGK+
Sbjct: 384 -GVGEYVLQFGKR 395


>gi|51246721|ref|YP_066605.1| tyrosyl-tRNA synthetase [Desulfotalea psychrophila LSv54]
 gi|81641170|sp|Q6AJ82|SYY_DESPS RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|50877758|emb|CAG37598.1| probable tyrosyl-tRNA synthetase [Desulfotalea psychrophila LSv54]
          Length = 405

 Score =  132 bits (331), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 112/381 (29%), Positives = 187/381 (49%), Gaps = 34/381 (8%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   L  L   Q  GH+ I L+G  T +IGDP+ + E+R+ +  +++ 
Sbjct: 45  GFDPTAPDLHLGHTVLLQKLKQFQDLGHQVIFLIGDFTGMIGDPTGKSETRKALTVEQVA 104

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           EN E  K     F      KT      N TWL  +   +++ ++ S  +V RML  E  +
Sbjct: 105 ENAETYKK--QVFKILDPEKTTVAF--NSTWLSKLTAHEMI-QLASELTVARMLEREDFK 159

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE-RLKTP 219
           +R +  + +S  EF Y ++Q YD V L    +  +++GG+DQ  N++ G DL   R + P
Sbjct: 160 NRYESGKPISIHEFMYPLIQGYDSVAL----EADVEIGGTDQRFNVLMGRDLQRSRGQAP 215

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
           ++  LT PLL    G  KM K+L   I + ++  S Y       ++ D  +  + + L+ 
Sbjct: 216 QV-VLTLPLLEGLDGVNKMSKSLGNYIGITEDADSIYG---KVLSVSDDLMFRYYELLSD 271

Query: 279 LPMSEI-DRMAKLQGKEIN--EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIH--- 332
           L  +EI D  A+++   ++  E KK +A E+T   H    +E+AA AA + F+       
Sbjct: 272 LTTAEIADLRAQMEAGTLHPKEVKKQLARELTARYH----SEEAAIAAEQNFENVFKKGG 327

Query: 333 -SQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
             + +P   +S DE    + L  L+  A    ST+E RR +K  A+ ++     +E + I
Sbjct: 328 IPEDLPEYQVSLDE---PIWLPKLLADAEMVKSTSEGRRMIKQGAVSLDGEKAVDESMLI 384

Query: 392 KLQDFDSTGNIKLSFGKKNHI 412
             +     G + +  GK+  +
Sbjct: 385 SPE-----GEVLIKVGKRRFV 400


>gi|172035948|ref|YP_001802449.1| tyrosyl-tRNA synthetase [Cyanothece sp. ATCC 51142]
 gi|171697402|gb|ACB50383.1| tyrosyl tRNA synthetase [Cyanothece sp. ATCC 51142]
          Length = 407

 Score =  132 bits (331), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 99/376 (26%), Positives = 176/376 (46%), Gaps = 23/376 (6%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D T + +H GH      L   Q  GH  + ++G  T+ IGDP+ + E R+ +  QE+
Sbjct: 49  LGIDPTGTDIHLGHSIPFRKLRGFQDAGHTAVVIIGDFTAQIGDPTGKSEVRKQLTPQEV 108

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           + N E         + + T     +  N+E WL  +  +  ++E+ +  +V +ML+ E  
Sbjct: 109 KNNAENYLEQLRPILDFDTPGRLEIRYNSE-WLKELN-LAKIQELLATMTVGQMLAKEGF 166

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R K+E  +   EF Y ++Q YD V +    D  +++GG+DQ  NI  G DL       
Sbjct: 167 AERYKQENPIFLHEFLYPLMQGYDSVMI----DADVELGGTDQKFNIAVGRDLQRHFGKK 222

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
             F L  P+L    G+ KM K+L+  + L ++  S Y+  +      DA +  + + LT 
Sbjct: 223 PQFGLLLPILLGTDGSQKMSKSLNNYVGLKEDELSMYSKLE---KTPDAIIKDYFELLTN 279

Query: 279 LPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDM--SIHSQHM 336
           LP+ ++ +  +       + +K++A EI T  HG+E A  A   A +      +  +  +
Sbjct: 280 LPLDQLPQNPR-------DCQKLLAIEIVTQFHGKEAALSAQKTAEDLVKNKGTGVTDAV 332

Query: 337 PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
           P   +S  E      L  ++  +G   S+ E RR ++  A++++   I++  + I  +D 
Sbjct: 333 PEYDLSNVEFP--AKLFYILNASGLCGSSGEGRRQIQGGAVRLDGEKITD--VNITFEDL 388

Query: 397 DSTGNIKLSFGKKNHI 412
           +      L  GKK  I
Sbjct: 389 EQLSGKVLQVGKKKFI 404


>gi|268316596|ref|YP_003290315.1| tyrosyl-tRNA synthetase [Rhodothermus marinus DSM 4252]
 gi|262334130|gb|ACY47927.1| tyrosyl-tRNA synthetase [Rhodothermus marinus DSM 4252]
          Length = 413

 Score =  132 bits (331), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 103/376 (27%), Positives = 177/376 (47%), Gaps = 25/376 (6%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D +   LH GH   L  L   Q  GH+ + ++G  T++IGDP+ R ++R  +  +E 
Sbjct: 45  LGCDPSRPDLHLGHAVVLRKLRQFQDLGHQAVLIIGDFTAMIGDPTGRSKTRPALTLEET 104

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           + N    +  F    K    +   +  N+E WL  + + D++ E+ + ++V RML  +  
Sbjct: 105 RAN---GRTYFEQAAKILDPERTIIRYNSE-WLGRMTFRDVI-ELAAKYTVARMLERDDF 159

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R K  + +   EF Y + QA D VE+  +    +++GG+DQ  N++ G D+ +     
Sbjct: 160 EKRYKAGEPIGIHEFLYPLAQAMDSVEIQAD----VELGGTDQRFNLLVGRDIQQAYGQE 215

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               L  P+L    G  KM K+L   I + +    P   +    +I D  +  + +  T 
Sbjct: 216 PQVCLLMPILEGTDGVEKMSKSLDNYIGITE---PPEEMYGKVLSIPDHLIYRYFELATD 272

Query: 279 LPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMP- 337
           +P  E+    +   ++   AK  +A  I  M HG    E+AA  A E F+ +I     P 
Sbjct: 273 IPTEELPAKKEFAERDPRNAKHELAWTIVRMYHG----EEAANRAREHFERTIIRGEAPE 328

Query: 338 ---TISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
                  + DE +R + L+ LIV+A  A+S +EARR ++  A+ I+   +++E L+I   
Sbjct: 329 DLEPFRPTPDEGTR-IALVNLIVQAELASSKSEARRLIRQGAVSIDGERVTDEHLEI--- 384

Query: 395 DFDSTGNIKLSFGKKN 410
           D        L  GK+ 
Sbjct: 385 DLAQRAPFVLKVGKRR 400


>gi|15606818|ref|NP_214198.1| tyrosyl-tRNA synthetase [Aquifex aeolicus VF5]
 gi|6226204|sp|O67632|SYY_AQUAE RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|2984054|gb|AAC07595.1| tyrosyl tRNA synthetase [Aquifex aeolicus VF5]
          Length = 392

 Score =  132 bits (331), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 104/374 (27%), Positives = 179/374 (47%), Gaps = 30/374 (8%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH+  L  L   Q+ GH+   ++G  T++IGDP+ R ++R  +  +++ 
Sbjct: 38  GFDPTAPDLHLGHVVLLQKLRQFQQLGHEVFFIIGDFTAMIGDPTGRSQTRPPLSREQVL 97

Query: 101 ENIEKIK-GIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           EN +  +  +F   I   T      ++ N TWL  +    L+ E+ + ++V RML  E  
Sbjct: 98  ENAKTYEHQVFKVLIPEKT-----TVVFNSTWLEELGTKGLI-ELCAKYTVARMLEREDF 151

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R K    +   EF Y +LQAYD V +  +    +++GG+DQ  N++ G D+       
Sbjct: 152 SKRFKEGIPIYIHEFIYPLLQAYDSVAIKAD----VEIGGTDQKFNLLIGRDIQREYGQE 207

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               +T PLL    G  KM K+    + + ++   P   +    +I D  +  +   LT 
Sbjct: 208 PQVCITLPLLVGTDGVRKMSKSYGNYVGITED---PKTMFAKIMSIPDEIMWDWFLLLTD 264

Query: 279 LPMSEIDRMAKLQGKEIN--EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM 336
               EI++M     +E++  EAKK++A  I    H  EEA KA     + F      +  
Sbjct: 265 YNKEEIEKMR----REMHPMEAKKLLAFTIVKRFHSEEEARKAKEWWEKTFSQREFPEDA 320

Query: 337 PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
           P + +++    + +  +  +VK G   S NEARR ++   +KIN   +++   +I++   
Sbjct: 321 PLVKLNE----KKLRAVDFLVKIGAVKSKNEARRVIQGGGLKINGEKVTDPNTEIEI--- 373

Query: 397 DSTGNIKLSFGKKN 410
              G +K+  GKK 
Sbjct: 374 --NGELKVKVGKKK 385


>gi|225873912|ref|YP_002755371.1| tyrosine--tRNA ligase [Acidobacterium capsulatum ATCC 51196]
 gi|225793777|gb|ACO33867.1| tyrosine--tRNA ligase [Acidobacterium capsulatum ATCC 51196]
          Length = 415

 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 100/354 (28%), Positives = 177/354 (50%), Gaps = 23/354 (6%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   +  L   Q  GH  I L+G  T++IGDP+ R  +R+ +  ++I 
Sbjct: 46  GFDPTAPDLHLGHTVLVRKLKHFQDLGHTVIFLVGDYTALIGDPTGRSATRKPLTREQID 105

Query: 101 ENIEK-IKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           +N +     +F    +  T     +  N+E WL  + + D++R + + F+V++ML     
Sbjct: 106 QNAQTYTDQVFKILDREKT----EVRFNSE-WLGKLSFEDIIR-LAAKFTVSQMLERAEF 159

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
            +R + EQ +S  EF Y + Q YD V L    +  +++GG+DQ  N++ G +L      P
Sbjct: 160 HARFQNEQPISLHEFMYPLAQGYDSVAL----EADVELGGTDQKFNLLAGRELQRDFGQP 215

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               L +P++    G  KM K+L  AI +++    P   +    +I+D  +  +   LT 
Sbjct: 216 PQIVLMTPIIEGLDGVQKMSKSLGNAIGIHE---PPQEMYGKLMSINDELMWRYWTLLTD 272

Query: 279 LPMSEIDRM-AKLQGKEIN--EAKKIIATEITTMVHGREEAEKAATAAMECFDM-SIHSQ 334
           L  SEID+M A +    ++  EAKK +A  I    HG E A+ A       F   S   +
Sbjct: 273 LRQSEIDQMQAHVTSGALHPMEAKKHLARTIVAGFHGAEAAQVADENWARQFQQKSDDVE 332

Query: 335 HMPTISISKD----EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSII 384
            +  ++++ +    +  +G+ +  L+   G A S++EA R +K  A++++  ++
Sbjct: 333 GLEELTLTPEALGFDPEKGIRVSKLLTALGLAASSSEADRKIKEGAVRLDGEVV 386


>gi|119486140|ref|ZP_01620200.1| tyrosyl-tRNA synthetase [Lyngbya sp. PCC 8106]
 gi|119456631|gb|EAW37760.1| tyrosyl-tRNA synthetase [Lyngbya sp. PCC 8106]
          Length = 416

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 100/380 (26%), Positives = 184/380 (48%), Gaps = 34/380 (8%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G D T + +H GH   +  L   Q  GH  + ++G  T+ IGDP+ + E R+ + ++++Q
Sbjct: 59  GIDPTGTDIHLGHSVVVRKLRDFQDAGHTAVLIIGDFTARIGDPTGKSEVRKQLTTEQVQ 118

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSI---KYIDLLREIGSFFSVNRMLSFE 157
           +N +         + + T     +  N+E WL ++   K +DLL    S  +V +ML+ E
Sbjct: 119 QNAQTYLDQVRPILDFDTPGRLEIRYNSE-WLSTLDLAKILDLL----STMTVGQMLAKE 173

Query: 158 SVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK 217
               R ++E  +   EF Y ++Q YD V +    +  +++GG+DQ  N+  G DL    +
Sbjct: 174 GFALRYEKEAPIYLHEFLYPLMQGYDSVAV----EADIELGGTDQKFNLAVGRDLQRYFQ 229

Query: 218 TPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRL 276
               F L  P+L    G  KM K+L   + L+++  + Y+  +    I D  +V + + L
Sbjct: 230 QKPQFGLLMPILIGTDGVQKMSKSLGNYVGLSEDALTMYSKLE---KIPDDLIVQYFELL 286

Query: 277 TTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSI-HSQH 335
           T LP+ E+    +       E +K++A ++ +  HG+E A +A  AA+     +   +  
Sbjct: 287 TKLPLDELPENPR-------ERQKLLALDVVSQYHGKEAALEAQKAAINLTGGNTKQADA 339

Query: 336 MPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           +P  S++  EV     L  ++  +G   S +EARR ++   ++++   I++  L      
Sbjct: 340 VPEFSLA--EVEFPAKLFYILSASGLCKSGSEARRQMQGGGVRLDGEQITDANLI----- 392

Query: 396 FDSTGNIK---LSFGKKNHI 412
           FDS  ++    L  GKK  +
Sbjct: 393 FDSIDDLNGRVLQVGKKKFV 412


>gi|253701885|ref|YP_003023074.1| tyrosyl-tRNA synthetase [Geobacter sp. M21]
 gi|251776735|gb|ACT19316.1| tyrosyl-tRNA synthetase [Geobacter sp. M21]
          Length = 403

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 106/355 (29%), Positives = 175/355 (49%), Gaps = 18/355 (5%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   L  +   QK GH+   L+G  T +IGDP+ + E+R+++  +++ 
Sbjct: 42  GFDPTAPDLHLGHTVLLHKMRQFQKLGHEVHFLIGDFTGMIGDPTGKSETRKVLTREDVL 101

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           +N E  K       K    K   ++ N+E WL  +   D++  + S ++V RML  E   
Sbjct: 102 KNAETYK---EQVFKILDPKLTKVVFNSE-WLGKLSASDMIG-LASKYTVARMLEREDFS 156

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
           +R   +  +S  EF Y ++Q YD V L  +    +++GG+DQ  N++ G +L        
Sbjct: 157 NRFSNQLPISIHEFMYPLVQGYDSVALKAD----VELGGTDQKFNLLVGRELQREWGQAP 212

Query: 221 LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTL 279
              +T PLL    G  KM K+L   I +N+     Y       +I D  +V + + L+ L
Sbjct: 213 QCVITMPLLEGLDGVNKMSKSLGNYIGINEPADEIYG---KIMSISDELMVRYYELLSDL 269

Query: 280 PMSEIDRM-AKLQGKEIN--EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM 336
            + E +++ A L+   I+  EAKK +A E+    HG E A  A    ++ F  +     M
Sbjct: 270 TIVEFEKLKADLKSGAIHPMEAKKQLAREMVGRYHGAEAATIADENFVKRFKNNETPDDM 329

Query: 337 PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
           P   I K E  R + L  ++ +A    S +E RR ++   +KIN   +++E L+I
Sbjct: 330 PEF-ILKAEGERVL-LCKVLAEAQLTKSNSEGRRSIQGGGVKINGEKVADENLEI 382


>gi|145627738|ref|ZP_01783539.1| tyrosyl-tRNA synthetase [Haemophilus influenzae 22.1-21]
 gi|144979513|gb|EDJ89172.1| tyrosyl-tRNA synthetase [Haemophilus influenzae 22.1-21]
          Length = 395

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 109/381 (28%), Positives = 177/381 (46%), Gaps = 29/381 (7%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           ILSE   I ++   R L +          +G D TA  +H GH   L  L   Q+ GH+ 
Sbjct: 18  ILSEADLIEKLKENRPLKV---------KLGADPTAPDIHLGHTVVLNKLRQFQQLGHEV 68

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
             L+G  T ++GDPS ++ +R  +  +++  N E  K       K    +   ++ N+E 
Sbjct: 69  YFLIGDFTGMVGDPSGKNATRPPLSREDVLRNAETYK---EQIYKILDPQKTKIVFNSE- 124

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           WL  +    ++R + S ++V RML  +  + R    Q ++  EF Y +LQ YD V L   
Sbjct: 125 WLSKLGTEGMIR-LASNYTVARMLERDDFKKRFGNNQPIAIHEFIYPLLQGYDSVAL--- 180

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNK 249
            D  +++GG+DQ  N++ G +L +        A+T PLL    G  KM K+L   I + +
Sbjct: 181 -DADVELGGTDQKFNLLVGRELQKSAGKKPQVAITLPLLVGLDGEKKMSKSLGNYIGVTE 239

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATEIT 307
              +P + +    +I D  + ++   L+  P+SEI ++      GK   + K ++A E+ 
Sbjct: 240 ---APSDMFGKVMSISDELMWNWYNLLSFRPLSEIAQLKSEVENGKNPRDVKILLAKELI 296

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
              H  E A  A    +  F        MP  + S +     MGL TL+ +AG   ST+E
Sbjct: 297 ARFHNEEAANAAEQEFINRFQKGAMPDEMPEFTFSGE-----MGLATLLKEAGLVPSTSE 351

Query: 368 ARRHLKSNAIKINNSIISNEK 388
           A R  +   +KIN   + N K
Sbjct: 352 AIRSAQQGGVKINGEKVDNVK 372


>gi|153207575|ref|ZP_01946258.1| tyrosyl-tRNA synthetase [Coxiella burnetii 'MSU Goat Q177']
 gi|212218024|ref|YP_002304811.1| tyrosyl-tRNA synthetase [Coxiella burnetii CbuK_Q154]
 gi|120576543|gb|EAX33167.1| tyrosyl-tRNA synthetase [Coxiella burnetii 'MSU Goat Q177']
 gi|212012286|gb|ACJ19666.1| tyrosyl-tRNA synthetase [Coxiella burnetii CbuK_Q154]
          Length = 399

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 106/385 (27%), Positives = 187/385 (48%), Gaps = 25/385 (6%)

Query: 14  ERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           +RG +  I     L  L  +  +   +G+D TA  +H GH   L  L   Q  GH+ I L
Sbjct: 12  KRGAVEIIHEDELLSRLAEEKPLRIKLGFDPTAPDIHLGHTVVLNKLRQFQTLGHEVIFL 71

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
           +G  T++IGDP+ ++ +R+ +  + + EN +  +    +F      KT   + +N TW+ 
Sbjct: 72  IGDFTAMIGDPTGKNITRQPLTREIVMENTKTYET--QAFRILDPDKTQ--VTSNSTWIN 127

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDC 193
            +K  DL+R + + ++V RML  +    R   +Q ++  EF Y +LQ YD V L  +   
Sbjct: 128 KLKADDLVR-LAATYTVARMLERDDFNKRYLSQQPIAIHEFLYPLLQGYDSVALKAD--- 183

Query: 194 RLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMT 252
            +++GG+DQ  N++ G +L +         LT PLL    G  KM K+L+  I + +   
Sbjct: 184 -VELGGTDQKFNLLVGRELQKHFGQRPQCVLTVPLLEGLDGIQKMSKSLNNYIGITE--- 239

Query: 253 SPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIATEITTMV 310
            P   +    +I D  +  + + L+  PM EI+R  +   +G+   + K ++A E+ T  
Sbjct: 240 PPEEMFGKVMSISDELMWCYYELLSFRPMREINRWREEVSEGRNPRDIKILLAEELVTRF 299

Query: 311 HGREEAEKAATAAMECFDMSIHSQHMPT----ISISKDEVSRGMGLLTLIVKAGFATSTN 366
           H +E    AAT A + F        +PT    I ++ +     +G   ++ +AG   +T+
Sbjct: 300 HSKE----AATKAHQHFIDRFKRHELPTDLDEIELTAENTHLTIGY--ILQRAGLVNTTS 353

Query: 367 EARRHLKSNAIKINNSIISNEKLQI 391
           E  R +   A++I+   + + KL I
Sbjct: 354 EGLRMIAQGAVRIDGERVEDIKLAI 378


>gi|161831069|ref|YP_001596140.1| tyrosyl-tRNA synthetase [Coxiella burnetii RSA 331]
 gi|161762936|gb|ABX78578.1| tyrosyl-tRNA synthetase [Coxiella burnetii RSA 331]
          Length = 399

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 106/385 (27%), Positives = 187/385 (48%), Gaps = 25/385 (6%)

Query: 14  ERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           +RG +  I     L  L  +  +   +G+D TA  +H GH   L  L   Q  GH+ I L
Sbjct: 12  KRGAVEIIHEDELLSRLAEEKPLRIKLGFDPTAPDIHLGHTVVLNKLRQFQTLGHEVIFL 71

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
           +G  T++IGDP+ ++ +R+ +  + + EN +  +    +F      KT   + +N TW+ 
Sbjct: 72  IGDFTAMIGDPTGKNITRQPLTCEIVMENTKTYET--QAFRILDPDKTQ--VTSNSTWIN 127

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDC 193
            +K  DL+R + + ++V RML  +    R   +Q ++  EF Y +LQ YD V L  +   
Sbjct: 128 KLKADDLVR-LAATYTVARMLERDDFNKRYLSQQPIAIHEFLYPLLQGYDSVALKAD--- 183

Query: 194 RLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMT 252
            +++GG+DQ  N++ G +L +         LT PLL    G  KM K+L+  I + +   
Sbjct: 184 -VELGGTDQKFNLLVGRELQKHFGQRPQCVLTVPLLEGLDGIQKMSKSLNNYIGITE--- 239

Query: 253 SPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIATEITTMV 310
            P   +    +I D  +  + + L+  PM EI+R  +   +G+   + K ++A E+ T  
Sbjct: 240 PPEEMFGKVMSISDELMWRYYELLSFRPMREINRWREEVSEGRNPRDIKILLAEELVTRF 299

Query: 311 HGREEAEKAATAAMECFDMSIHSQHMPT----ISISKDEVSRGMGLLTLIVKAGFATSTN 366
           H +E    AAT A + F        +PT    I ++ +     +G   ++ +AG   +T+
Sbjct: 300 HSKE----AATKAHQHFIDRFKRHELPTDLDEIELTAENTHLTIGY--ILQRAGLVNTTS 353

Query: 367 EARRHLKSNAIKINNSIISNEKLQI 391
           E  R +   A++I+   + + KL I
Sbjct: 354 EGLRMIAQGAVRIDGERVEDIKLAI 378


>gi|160871601|ref|ZP_02061733.1| tyrosyl-tRNA synthetase [Rickettsiella grylli]
 gi|159120400|gb|EDP45738.1| tyrosyl-tRNA synthetase [Rickettsiella grylli]
          Length = 401

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 107/363 (29%), Positives = 176/363 (48%), Gaps = 31/363 (8%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   +  L  LQ  GH+   ++G  T++IGDPS ++ +R  +   ++ 
Sbjct: 37  GFDPTAPDLHLGHTVLINKLRQLQDLGHEIDIIIGDFTALIGDPSGKNVTRPPLSVDKVV 96

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
            N +  +  F   +     KT+  +  N TWL  +   DL++ + S ++V RML  +   
Sbjct: 97  ANTKTYQQQFDKIL--DPKKTN--LRFNSTWLGKLSVTDLIK-LASSYTVARMLERDDFH 151

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R  + +S++  EF Y +LQAYD V L  + +C    GG+DQ  N++ G +  +  K   
Sbjct: 152 QRYHQHRSIAIHEFLYPLLQAYDSVVLKTDLEC----GGNDQKFNLLLGREFQKHFKQTP 207

Query: 221 LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYN---------FWQYWRNIDDADVV 270
              LT P+L    G  KM K+L+  I +++   + +           W+Y+      +++
Sbjct: 208 QIILTLPVLEGLDGVQKMSKSLNNYIAIDESANTMFGKIMSISDELMWRYF------ELL 261

Query: 271 SFAKRLTTLPMSEIDRMAKLQGKEINEAKKI-IATEITTMVHGREEAEKAATAAMECFDM 329
           SF K L  +   + D    L+GK      KI +A EI    H   EAEKA       F  
Sbjct: 262 SFKKTLNDIKKMQQD---ALEGKANPRDFKIELALEIIERFHTPSEAEKALKEFQHQFRE 318

Query: 330 SIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKL 389
                 + T+ IS       + +  L+ +AG  +ST+EA R + + A+KI++  I ++KL
Sbjct: 319 GAIPSEIKTLCISIS--GENLPIAHLLKRAGLVSSTSEAFRFIDAGAVKIDSIKIDDKKL 376

Query: 390 QIK 392
            IK
Sbjct: 377 SIK 379


>gi|165924084|ref|ZP_02219916.1| tyrosyl-tRNA synthetase [Coxiella burnetii RSA 334]
 gi|165916461|gb|EDR35065.1| tyrosyl-tRNA synthetase [Coxiella burnetii RSA 334]
          Length = 399

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 106/385 (27%), Positives = 187/385 (48%), Gaps = 25/385 (6%)

Query: 14  ERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           +RG +  I     L  L  +  +   +G+D TA  +H GH   L  L   Q  GH+ I L
Sbjct: 12  KRGAVEIIREDELLSRLAEEKPLRIKLGFDPTAPDIHLGHTVVLNKLRQFQTLGHEVIFL 71

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
           +G  T++IGDP+ ++ +R+ +  + + EN +  +    +F      KT   + +N TW+ 
Sbjct: 72  IGDFTAMIGDPTGKNITRQPLTREIVMENTKTYET--QAFRILDPDKTQ--VTSNSTWIN 127

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDC 193
            +K  DL+R + + ++V RML  +    R   +Q ++  EF Y +LQ YD V L  +   
Sbjct: 128 KLKADDLVR-LAATYTVARMLERDDFNKRYLSQQPIAIHEFLYPLLQGYDSVALKAD--- 183

Query: 194 RLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMT 252
            +++GG+DQ  N++ G +L +         LT PLL    G  KM K+L+  I + +   
Sbjct: 184 -VELGGTDQKFNLLVGRELQKHFGQRPQCVLTVPLLEGLDGIQKMSKSLNNYIGITE--- 239

Query: 253 SPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIATEITTMV 310
            P   +    +I D  +  + + L+  PM EI+R  +   +G+   + K ++A E+ T  
Sbjct: 240 PPEEMFGKVMSISDELMWCYYELLSFRPMREINRWREEVSEGRNPRDIKILLAEELVTRF 299

Query: 311 HGREEAEKAATAAMECFDMSIHSQHMPT----ISISKDEVSRGMGLLTLIVKAGFATSTN 366
           H +E    AAT A + F        +PT    I ++ +     +G   ++ +AG   +T+
Sbjct: 300 HSKE----AATKAHQHFIDRFKRHELPTDLDEIELTAENTHLTIGY--ILQRAGLVNTTS 353

Query: 367 EARRHLKSNAIKINNSIISNEKLQI 391
           E  R +   A++I+   + + KL I
Sbjct: 354 EGLRMIAQGAVRIDGERVEDIKLAI 378


>gi|29653535|ref|NP_819227.1| tyrosyl-tRNA synthetase [Coxiella burnetii RSA 493]
 gi|154706075|ref|YP_001425233.1| tyrosyl-tRNA synthetase [Coxiella burnetii Dugway 5J108-111]
 gi|81629599|sp|Q83EX7|SYY_COXBU RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|29540797|gb|AAO89741.1| tyrosyl-tRNA synthetase [Coxiella burnetii RSA 493]
 gi|154355361|gb|ABS76823.1| tyrosyl-tRNA synthetase [Coxiella burnetii Dugway 5J108-111]
          Length = 399

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 106/385 (27%), Positives = 187/385 (48%), Gaps = 25/385 (6%)

Query: 14  ERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           +RG +  I     L  L  +  +   +G+D TA  +H GH   L  L   Q  GH+ I L
Sbjct: 12  KRGAVEIIHEDELLSRLAEEKPLRIKLGFDPTAPDIHLGHTVVLNKLRQFQTLGHEVIFL 71

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
           +G  T++IGDP+ ++ +R+ +  + + EN +  +    +F      KT   + +N TW+ 
Sbjct: 72  IGDFTAMIGDPTGKNITRQPLTREIVMENTKTYET--QAFRILDPDKTQ--VTSNSTWIN 127

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDC 193
            +K  DL+R + + ++V RML  +    R   +Q ++  EF Y +LQ YD V L  +   
Sbjct: 128 KLKADDLVR-LAATYTVARMLERDDFNKRYLSQQPIAIHEFLYPLLQGYDSVALKAD--- 183

Query: 194 RLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMT 252
            +++GG+DQ  N++ G +L +         LT PLL    G  KM K+L+  I + +   
Sbjct: 184 -VELGGTDQKFNLLVGRELQKHFGQRPQCVLTVPLLEGLDGIQKMSKSLNNYIGITE--- 239

Query: 253 SPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIATEITTMV 310
            P   +    +I D  +  + + L+  PM EI+R  +   +G+   + K ++A E+ T  
Sbjct: 240 PPEEMFGKVMSISDELMWRYYELLSFRPMREINRWREEVSEGRNPRDIKILLAEELVTRF 299

Query: 311 HGREEAEKAATAAMECFDMSIHSQHMPT----ISISKDEVSRGMGLLTLIVKAGFATSTN 366
           H +E    AAT A + F        +PT    I ++ +     +G   ++ +AG   +T+
Sbjct: 300 HSKE----AATKAHQHFIDRFKRHELPTDLDEIELTAENTHLTIGY--ILQRAGLVNTTS 353

Query: 367 EARRHLKSNAIKINNSIISNEKLQI 391
           E  R +   A++I+   + + KL I
Sbjct: 354 EGLRMIAQGAVRIDGERVEDIKLAI 378


>gi|145639920|ref|ZP_01795520.1| tyrosyl-tRNA synthetase [Haemophilus influenzae PittII]
 gi|145641762|ref|ZP_01797338.1| tyrosyl-tRNA synthetase [Haemophilus influenzae R3021]
 gi|145271011|gb|EDK10928.1| tyrosyl-tRNA synthetase [Haemophilus influenzae PittII]
 gi|145273576|gb|EDK13446.1| tyrosyl-tRNA synthetase [Haemophilus influenzae 22.4-21]
 gi|309751098|gb|ADO81082.1| Tyrosyl-tRNA synthetase [Haemophilus influenzae R2866]
          Length = 395

 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 109/381 (28%), Positives = 176/381 (46%), Gaps = 29/381 (7%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           ILSE   I ++   R L +          +G D TA  +H GH   L  L   Q+ GH+ 
Sbjct: 18  ILSEADLIEKLKENRPLKV---------KLGADPTAPDIHLGHTVVLNKLRQFQQLGHEV 68

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
             L+G  T ++GDPS ++ +R  +  +++  N E  K       K    +   ++ N+E 
Sbjct: 69  YFLIGDFTGMVGDPSGKNATRPPLSREDVLRNAETYK---EQIYKILDPQKTKIVFNSE- 124

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           WL  +    ++R + S ++V RML  +  + R    Q ++  EF Y +LQ YD V L   
Sbjct: 125 WLSKLGTEGMIR-LASNYTVARMLERDDFKKRFGNNQPIAIHEFIYPLLQGYDSVAL--- 180

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNK 249
            D  +++GG+DQ  N++ G +L +        A+T PLL    G  KM K+L   I + +
Sbjct: 181 -DADVELGGTDQKFNLLVGRELQKSAGKKPQVAITLPLLVGLDGEKKMSKSLGNYIGVTE 239

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATEIT 307
              +P + +    +I D  +  +   L+  P+SEI ++      GK   + K ++A E+ 
Sbjct: 240 ---APSDMFGKVMSISDELMWDWYNLLSFRPLSEIAQLKSEVENGKNPRDVKILLAKELI 296

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
              H  E A  A    +  F        MP  + S +     MGL TL+ +AG   ST+E
Sbjct: 297 ARFHNEEAANAAEQEFINRFQKGAMPDEMPEFTFSGE-----MGLATLLKEAGLVPSTSE 351

Query: 368 ARRHLKSNAIKINNSIISNEK 388
           A R  +   +KIN   + N K
Sbjct: 352 AIRSAQQGGVKINGEKVDNVK 372


>gi|312876148|ref|ZP_07736136.1| tyrosyl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A]
 gi|311797134|gb|EFR13475.1| tyrosyl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A]
          Length = 396

 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 111/375 (29%), Positives = 191/375 (50%), Gaps = 25/375 (6%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D     +H GH   L  L  LQ  GH  I ++G  T++IGDP+ + E+R+ +  +E+
Sbjct: 37  LGLDPNVPDVHLGHAVVLRKLKQLQDLGHNIILIIGDFTAMIGDPTGKSETRKQLTKEEV 96

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           Q+N E  K      +K    +   +  N+E WL  + ++D++  + S ++V RML  E+ 
Sbjct: 97  QKNAEPFK---QQVLKILDPQKTTIRYNSE-WLEPMNFLDVIN-LASKYTVARMLERETF 151

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL--K 217
           R R+++   LS  EF Y ++Q YD V +    +  +++G ++Q  NI+ G  L +    K
Sbjct: 152 RQRMEKNLPLSIHEFFYPLMQGYDSVVI----EADVELGATEQKFNILMGRTLQKEYGCK 207

Query: 218 TPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRL 276
           T ++ AL  P+L    G  KM K+L   I +N+    P   +    +I D  ++S+ +  
Sbjct: 208 TIQV-ALLMPILVGTDGVNKMSKSLGNYIGINE---PPNVMYGKVMSIPDEIMISYYELT 263

Query: 277 TTLPMSEIDRMA-KLQGKEIN--EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS 333
           T L   EI+ +  KL+   ++  +AK  +A EI  + HG E A KA    ++ F      
Sbjct: 264 TDLEPEEIEEIKRKLEEGTLHPRDAKMRLAREIVKLYHGEEAALKAEEEFIKVFQKKDIP 323

Query: 334 QHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL 393
            ++P + +   +V     L   +V+    +ST+E  R +KS A+K+N   +++  L I+L
Sbjct: 324 DNIPEVELESSKVY----LPRFMVENKLCSSTSEGMRLIKSGAVKLNGEKVND--LDIEL 377

Query: 394 QDFDSTGNIKLSFGK 408
           Q+ D     KL F K
Sbjct: 378 QNGDVLQVGKLKFVK 392


>gi|212213297|ref|YP_002304233.1| tyrosyl-tRNA synthetase [Coxiella burnetii CbuG_Q212]
 gi|212011707|gb|ACJ19088.1| tyrosyl-tRNA synthetase [Coxiella burnetii CbuG_Q212]
          Length = 399

 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 106/385 (27%), Positives = 187/385 (48%), Gaps = 25/385 (6%)

Query: 14  ERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           +RG +  I     L  L  +  +   +G+D TA  +H GH   L  L   Q  GH+ I L
Sbjct: 12  KRGAVEIIHEDELLSRLAEEKPLRIKLGFDPTAPDIHLGHTVVLNKLRQFQTLGHEVIFL 71

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
           +G  T++IGDP+ ++ +R+ +  + + EN +  +    +F      KT   + +N TW+ 
Sbjct: 72  IGDFTAMIGDPTGKNITRQPLTREIVMENTKTYET--QAFRILDPDKTQ--VTSNSTWIN 127

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDC 193
            +K  DL+R + + ++V RML  +    R   +Q ++  EF Y +LQ YD V L  +   
Sbjct: 128 KLKADDLVR-LAATYTVARMLERDDFNKRYLSQQPIAIHEFLYPLLQGYDSVALKAD--- 183

Query: 194 RLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMT 252
            +++GG+DQ  N++ G +L +         LT PLL    G  KM K+L+  I + +   
Sbjct: 184 -VELGGTDQKFNLLVGRELQKHFGQRPQSVLTVPLLEGLDGIQKMSKSLNNYIGITE--- 239

Query: 253 SPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIATEITTMV 310
            P   +    +I D  +  + + L+  PM EI+R  +   +G+   + K ++A E+ T  
Sbjct: 240 PPEEMFGKVMSISDELMWRYYELLSFRPMREINRWREEVSEGRNPRDIKILLAEELVTRF 299

Query: 311 HGREEAEKAATAAMECFDMSIHSQHMPT----ISISKDEVSRGMGLLTLIVKAGFATSTN 366
           H +E    AAT A + F        +PT    I ++ +     +G   ++ +AG   +T+
Sbjct: 300 HSKE----AATKAHQHFIDRFKRHELPTDLDEIELTAENTHLTIGY--ILQRAGLVNTTS 353

Query: 367 EARRHLKSNAIKINNSIISNEKLQI 391
           E  R +   A++I+   + + KL I
Sbjct: 354 EGLRMIAQGAVRIDGERVEDIKLAI 378


>gi|302038034|ref|YP_003798356.1| tyrosyl-tRNA synthetase [Candidatus Nitrospira defluvii]
 gi|300606098|emb|CBK42431.1| Tyrosyl-tRNA synthetase [Candidatus Nitrospira defluvii]
          Length = 405

 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 116/414 (28%), Positives = 184/414 (44%), Gaps = 51/414 (12%)

Query: 15  RGFIHQISNPRELDI-----LCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
           RG + ++ NP EL+      L  Q  +    G+D TA  LH GH   +  L   Q  GH+
Sbjct: 13  RGIV-EVINPNELESRLVRSLKEQRPLRVKAGFDPTAPDLHLGHTVLIHKLKHFQDLGHQ 71

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKI-KGIFSSFIKYGTGKTDALMLNN 128
            I L+G  T +IGDP+ R E+R  +  +++ EN +   + IF     + T      +  N
Sbjct: 72  VIFLIGDFTGMIGDPTGRSETRVALSKEKVLENAKTYERQIFKILDPHKTQ-----VEFN 126

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             W+ ++   D L E+ + ++V RML  E    R    + +S  EF Y ++Q YD V L 
Sbjct: 127 SRWMSAMT-ADGLIELSAHYTVARMLEREDFHKRYTEGKPISIHEFMYPLIQGYDSVALK 185

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWL 247
            +    +++GG+DQ  N++ G DL           +T PLL    G  KM K+L   I L
Sbjct: 186 AD----VELGGTDQKFNLLMGRDLQRDYGQDAQVVITMPLLEGTDGVRKMSKSLGNYIAL 241

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
             +   P   +    +I DA +  + + LTT      + + +++     +AK+ +A  I 
Sbjct: 242 EDK---PDEMFGKVMSISDALMQRYYELLTT------EDLERVKTAHPMDAKQSLAELIV 292

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMP---------TISISKDEVSRGMGLLTLIVK 358
              HG E    A   A   F     S+  P         T S  KD V+  +GL+ L+ +
Sbjct: 293 ARYHGVE----AGREARAMFQQKFQSREFPDQPDARVTLTSSDVKDVVAPSIGLVDLVAR 348

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
            G   S +EARR +    ++IN    +           D+   I L+ GK  H+
Sbjct: 349 TGLVPSKSEARRLIVQGGVEINEQKFT-----------DANAAIPLTAGKPLHM 391


>gi|197117360|ref|YP_002137787.1| tyrosyl-tRNA synthetase [Geobacter bemidjiensis Bem]
 gi|197086720|gb|ACH37991.1| tyrosyl-tRNA synthetase [Geobacter bemidjiensis Bem]
          Length = 403

 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 101/361 (27%), Positives = 168/361 (46%), Gaps = 30/361 (8%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   L  +   QK GH+   L+G  T +IGDP+ + E+R+++  +++ 
Sbjct: 42  GFDPTAPDLHLGHTVLLHKMRQFQKLGHEVHFLIGDFTGMIGDPTGKSETRKVLTREDVL 101

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           +N E  K       K    K   ++ N+E WL  +   D++  + S ++V RML  E   
Sbjct: 102 KNAETYK---EQVFKILDPKLTKVVFNSE-WLGKLSASDMIG-LASKYTVARMLEREDFS 156

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
           +R   +  +S  EF Y ++Q YD V L  +    +++GG+DQ  N++ G +L        
Sbjct: 157 NRFSNQLPISIHEFMYPLVQGYDSVALKAD----VELGGTDQKFNLLVGRELQREWGQAP 212

Query: 221 LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYN---------FWQYWRNIDDADVV 270
              +T PLL    G  KM K+L   I +N+     Y            +Y+  + D  +V
Sbjct: 213 QCVITMPLLEGLDGVNKMSKSLGNYIGINEPADEIYGKIMSISDELMIRYYELLSDLTIV 272

Query: 271 SFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMS 330
            F K  + L    I  M         EAKK +A E+    HG E A  A    ++ F  +
Sbjct: 273 EFEKLKSDLKDGAIHPM---------EAKKQLAREMVGRYHGVEAATLADENFVKRFKNN 323

Query: 331 IHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQ 390
              + MP  ++  +     + L  ++ +A    S +E RR ++   +K+N   +S+E L+
Sbjct: 324 ETPEDMPEFTLKAE--GEKVLLCKVLAEAQLTKSNSEGRRSIQGGGVKVNGDKVSDENLE 381

Query: 391 I 391
           I
Sbjct: 382 I 382


>gi|284928651|ref|YP_003421173.1| tyrosyl-tRNA synthetase [cyanobacterium UCYN-A]
 gi|284809110|gb|ADB94815.1| tyrosyl-tRNA synthetase [cyanobacterium UCYN-A]
          Length = 403

 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 98/349 (28%), Positives = 174/349 (49%), Gaps = 23/349 (6%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D T S +H GH      L   Q  GH  + ++G  T+ IGDP+ + E R+ + S+++
Sbjct: 43  LGIDPTGSDIHLGHSIPFRKLRAFQDAGHTAVVIIGDFTAQIGDPTGKSEVRKQLNSKQV 102

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           ++N+E      SS + + T     +  N+E W   + +   ++E+ S  +V++ML+ E  
Sbjct: 103 EKNVESYLEQLSSVLDFSTPGRLEIRYNSE-WFNKLDF-HKVQELLSTMTVSQMLAKEGF 160

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R K+E  +   EF Y ++Q YD V +    +  +++GG+DQ  NI  G DL       
Sbjct: 161 SERYKKENPIFLHEFLYPLMQGYDSVVV----NADVELGGTDQKFNIAVGRDLQRHFGQK 216

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
             F L  P+LT   GT KM K+L   I L ++  S Y+  +    I D  V ++ + LT 
Sbjct: 217 PQFGLLLPILTGTDGTQKMSKSLGNYIGLKEDALSMYSKIE---KIPDTLVQNYFELLTN 273

Query: 279 LPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPT 338
           L ++E+        K+  E +K++ATEIT+  HG    EKA +A     ++  +   + T
Sbjct: 274 LDLNELP-------KDSRELQKLLATEITSHYHGE---EKALSAKKTAENLVKNRNSLLT 323

Query: 339 ISISKDEVSRGM---GLLTLIVKAGFATSTNEARRHLKSNAIKINNSII 384
            +I++  +S  +    L  ++  +    S+ E RR ++  ++++    I
Sbjct: 324 DTITEFNLSNVVFPAKLFYILSASKLCVSSGEGRRQIQGGSVRLEGEKI 372


>gi|328955875|ref|YP_004373208.1| tyrosyl-tRNA synthetase [Coriobacterium glomerans PW2]
 gi|328456199|gb|AEB07393.1| tyrosyl-tRNA synthetase [Coriobacterium glomerans PW2]
          Length = 406

 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 99/348 (28%), Positives = 166/348 (47%), Gaps = 23/348 (6%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D T+S LH GH   L  L  LQ  GH+   ++G GT++IGDPS R+ +R  +   EI
Sbjct: 38  LGVDPTSSDLHLGHAVPLRKLRQLQDLGHRVTLIIGNGTALIGDPSGRNSTRPQLTPDEI 97

Query: 100 QENIEKIKGIFSSFIKYGTGKTDA---LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSF 156
             N        ++++   T   D     +L N  W+ ++   DLL E+ S F+V R+L  
Sbjct: 98  DANA-------ATYVAQATKILDPDATEVLYNAAWMLALDLKDLL-ELASRFTVARILER 149

Query: 157 ESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL 216
           +    R + +  ++  EF Y I+QAYD V++    +  +++GG+DQ  N++ G +L E+L
Sbjct: 150 DDFTRRYESQTPIALHEFLYPIMQAYDSVKI----EADVEIGGNDQLFNLLAGRELMEKL 205

Query: 217 KTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKR 275
                 ALT PLL    G  KM K+    I L     +P   +    +I D  +  + + 
Sbjct: 206 GMEPQVALTMPLLEGTDGVRKMSKSYGNYIGLTD---APEEMFGKTMSISDEMIPRYYRL 262

Query: 276 LTTLPMSEIDRM--AKLQGK-EINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIH 332
            ++    ++D +  A   G  +  E K+ +A EI    HG    ++A  A    F     
Sbjct: 263 ASSRSPEQVDAIEAALADGSAQPYELKRQLAREIADTYHGAGAGDRAQAAFDRVFREGRL 322

Query: 333 SQHMPTISISKDEVSRGMGLLTLIVK-AGFATSTNEARRHLKSNAIKI 379
              +P + +  +    G   L  +++ AG A S+ EARR +    +++
Sbjct: 323 PSEVPGVFVDLEPGDDGTVYLAGVLRQAGLAGSSGEARRLIDGGGVRV 370


>gi|32266329|ref|NP_860361.1| tyrosyl-tRNA synthetase [Helicobacter hepaticus ATCC 51449]
 gi|81666011|sp|Q7VHY1|SYY_HELHP RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|32262379|gb|AAP77427.1| tyrosyl-tRNA synthetase [Helicobacter hepaticus ATCC 51449]
          Length = 400

 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 111/362 (30%), Positives = 181/362 (50%), Gaps = 24/362 (6%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   L  L   Q+ G     L+G  T+ IGDPS + E+R+ + +++++
Sbjct: 42  GFDPTAPDLHLGHTVLLQKLATFQRYGGDVKFLIGDFTATIGDPSGKSETRKPLSAEQVK 101

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
            N    K       K    +   +  N++ WL  +  + L+  + S FSV RML  +   
Sbjct: 102 ANALTYK---EQVFKVLDPQYTQICFNSK-WLNELGALGLI-TLTSHFSVARMLERDDFT 156

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R    QS+S +EF Y +LQ YD V L    +C +++GG+DQ  N++ G  L    K  K
Sbjct: 157 KRYNNNQSISIVEFIYPLLQGYDSVAL----NCDIELGGNDQKFNLLVGRSLQRAYKLNK 212

Query: 221 -LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               +T PLL    G  KM K+L+  I + +   + Y       +I+D  +  + + L++
Sbjct: 213 EQSVMTLPLLEGLDGVHKMSKSLNNYIGVTESANTMY---AKILSINDEMMWRYYELLSS 269

Query: 279 LPMSEIDRMAKLQGKEIN----EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQ 334
           L + EI  M K Q    N      K+ +A EITT  H  + A++A  A    FD      
Sbjct: 270 LSLQEI-VMLKEQVNTGNAHPKAVKEQLALEITTRYHNIDLAKQAKIA----FDNVFSKD 324

Query: 335 HMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
            +PT  ++    + G  +  ++V AG   ST++ARR +++ A+KIN   I NE+L++ + 
Sbjct: 325 EIPT-DLAVFTCNEGEWIARVLVIAGLCESTSQARRDIRAGALKINKEKIMNEELKLSVG 383

Query: 395 DF 396
           ++
Sbjct: 384 EY 385


>gi|218288874|ref|ZP_03493125.1| tyrosyl-tRNA synthetase [Alicyclobacillus acidocaldarius LAA1]
 gi|218240963|gb|EED08140.1| tyrosyl-tRNA synthetase [Alicyclobacillus acidocaldarius LAA1]
          Length = 413

 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 99/371 (26%), Positives = 176/371 (47%), Gaps = 20/371 (5%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D T+S +H GH   L  L   Q  GH+   ++G  T  IGDP+ + E+R+ + ++E+
Sbjct: 53  LGIDPTSSDIHLGHTVVLHKLRQFQDLGHQVFLVIGSFTGQIGDPTDKAETRKQLSAEEV 112

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
            EN    K   +   K    +   ++ N + WL  + +  ++R + S  +V RML  E  
Sbjct: 113 AEN---AKTYVAQLYKILDPEKTQVVYNGD-WLAPLDFAQVIR-LASTITVARMLEREDF 167

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
           + R +  + +   EF Y ++QAYD V L  +    +++GG+DQ  N++ G  L      P
Sbjct: 168 QKRFQDNRPIHVHEFFYPLMQAYDSVHLRAD----VELGGTDQKFNLLMGRHLQREFGQP 223

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
              A+  PLL    G  KM K+L   I +N+E   P N +    ++ D+ +  + + L+ 
Sbjct: 224 MQVAVMLPLLEGLDGVNKMSKSLGNYIGVNEE---PNNMFGKLMSVPDSLLFKYYELLSL 280

Query: 279 LPMSEIDRMAK-LQGKEIN--EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQH 335
            P  EI+ M + ++   +N  +AK  +A E+     G E    A   A+E +        
Sbjct: 281 RPQDEIEAMRREVEAGRMNPRDAKMQLAEELVERFLGPE----ARREAVEHWRTVFQKGG 336

Query: 336 MPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           +P     +        ++  +V  G A S ++ARR ++  A+++N + +++   Q + QD
Sbjct: 337 LPDDIPERRVAGEAQWIVKWLVDLGLAQSNSDARRAIQEGAVRLNGNKVTDTDFQYRPQD 396

Query: 396 FDSTGNIKLSF 406
            D     K  F
Sbjct: 397 GDVLQRGKRQF 407


>gi|16273500|ref|NP_439752.1| tyrosyl-tRNA synthetase [Haemophilus influenzae Rd KW20]
 gi|1174554|sp|P43836|SYY_HAEIN RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|1574452|gb|AAC23254.1| tyrosyl tRNA synthetase (tyrS) [Haemophilus influenzae Rd KW20]
          Length = 401

 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 108/381 (28%), Positives = 176/381 (46%), Gaps = 29/381 (7%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           ILSE   I ++   R L +          +G D TA  +H GH   L  L   Q+ GH+ 
Sbjct: 18  ILSEADLIEKLKENRPLKV---------KLGADPTAPDIHLGHTVVLNKLRQFQQLGHEV 68

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
             L+G  T ++GDPS ++ +R  +  +++  N E  K       K    +   ++ N+E 
Sbjct: 69  YFLIGDFTGMVGDPSGKNATRPPLSREDVLRNAETYK---EQIYKILDPQKTKIVFNSE- 124

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           WL  +    ++R + S ++V RML  +  + R    Q ++  EF Y +LQ YD V L   
Sbjct: 125 WLSKLGTXGMIR-LASNYTVARMLERDDFKKRFGNNQPIAIHEFIYPLLQGYDSVAL--- 180

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNK 249
            D  +++GG+DQ  N++ G +L +        A+T PLL    G  KM K+L   I + +
Sbjct: 181 -DADVELGGTDQKFNLLVGRELQKSAGKKPQVAITLPLLVGLDGEKKMSKSLGNYIGVTE 239

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATEIT 307
              +P + +    +I D  +  +   L+  P++EI ++      GK   + K ++A E+ 
Sbjct: 240 ---APSDMFGKVMSISDELMWDWYNLLSFRPLNEIAQLKSEVENGKNPRDVKILLAKELI 296

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
              H  E A  A    +  F        MP  + S +     MGL TL+ +AG   ST+E
Sbjct: 297 ARFHNEEAANAAEQEFINRFQKGAMPDEMPEFTFSGE-----MGLATLLKEAGLVPSTSE 351

Query: 368 ARRHLKSNAIKINNSIISNEK 388
           A R  +   +KIN   + N K
Sbjct: 352 AIRSAQQGGVKINGEKVDNVK 372


>gi|258512087|ref|YP_003185521.1| tyrosyl-tRNA synthetase [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
 gi|257478813|gb|ACV59132.1| tyrosyl-tRNA synthetase [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
          Length = 413

 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 99/371 (26%), Positives = 177/371 (47%), Gaps = 20/371 (5%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D T+S +H GH   L  L   Q  GH+   ++G  T  IGDP+ + E+R+ + ++E+
Sbjct: 53  LGIDPTSSDIHLGHTVVLHKLRQFQDLGHQVFLVIGSFTGQIGDPTDKAETRKQLSAEEV 112

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
            EN    K   +   K    +   ++ N + WL  + +  ++R + S  +V RML  E  
Sbjct: 113 AEN---AKTYVAQLYKILDPEKTQVVYNGD-WLAPLDFAQVIR-LASTITVARMLEREDF 167

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
           + R +  + +   EF Y ++QAYD V L  +    +++GG+DQ  N++ G  L      P
Sbjct: 168 QKRFQDNRPIHVHEFFYPLMQAYDSVHLRAD----VELGGTDQKFNLLMGRHLQREFGQP 223

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
              A+  PLL    G  KM K+L   I +N+E   P N +    ++ D+ +  + + L+ 
Sbjct: 224 MQVAVMLPLLEGLDGVNKMSKSLGNYIGVNEE---PNNMFGKLMSVPDSLLFKYYELLSL 280

Query: 279 LPMSEIDRMAK-LQGKEIN--EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQH 335
            P  EI+ M + ++   +N  +AK  +A E+     G E    A   A+E +        
Sbjct: 281 RPQDEIEAMRREVEAGRMNPRDAKMQLAEELVERFLGPE----ARREAVEHWRTVFQKGG 336

Query: 336 MPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           +P     +        ++  +V  G A S ++ARR ++  A+++N + +++  +Q + QD
Sbjct: 337 LPDDIPERRVAGEAQWIVKWLVDLGLAQSNSDARRAIQEGAVRLNGNKVTDMDVQYRPQD 396

Query: 396 FDSTGNIKLSF 406
            D     K  F
Sbjct: 397 GDVLQRGKRQF 407


>gi|39996241|ref|NP_952192.1| tyrosyl-tRNA synthetase [Geobacter sulfurreducens PCA]
 gi|81702779|sp|Q74E25|SYY_GEOSL RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|39983121|gb|AAR34515.1| tyrosyl-tRNA synthetase [Geobacter sulfurreducens PCA]
 gi|298505252|gb|ADI83975.1| tyrosyl-tRNA synthetase [Geobacter sulfurreducens KN400]
          Length = 403

 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 104/374 (27%), Positives = 183/374 (48%), Gaps = 25/374 (6%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   L  +   Q+ GH+ I L+G  T +IGDP+ + E+R+ +  +++ 
Sbjct: 42  GFDPTAPDLHLGHTVLLHKMRQFQQLGHEVIFLIGDFTGMIGDPTGKSETRKALSREDVL 101

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
            N E  K       K    +   +  N+E WL  +    ++  + + ++V RML  +   
Sbjct: 102 RNAETYK---EQVFKILDPEKTRVAFNSE-WLAKLDAGGMI-GLAAKYTVARMLERDDFG 156

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLG-ERLKTP 219
            R   +  +S  EF Y ++Q YD V L  +    +++GG+DQ  N++ G +L  E  +TP
Sbjct: 157 KRFANQLPISIHEFLYPLIQGYDSVALQAD----VELGGTDQKFNLLVGRELQREWGQTP 212

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
           +   +T PLL    G  KM K+L   I +N+        +    +I D  ++ + + L+ 
Sbjct: 213 QT-VITMPLLEGLDGVNKMSKSLGNYIGINEPAD---EIFGKIMSISDELMLRYYELLSD 268

Query: 279 LPMSEIDRM-AKLQGKEIN--EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQH 335
           L M+EID M   ++   ++  EAKK +  E+    HG   A  A    ++ F  +     
Sbjct: 269 LSMAEIDGMRTGIRDGSVHPMEAKKQLGREVVARYHGAAAATDAEEHFVKRFRDNQTPDE 328

Query: 336 MPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           MP ++++       + L  L+ +AG   S +E RR ++   +K+N   +S+E L++    
Sbjct: 329 MPELTLAA--TDEKVALCRLLAEAGLVKSNSEGRRAIQQGGVKVNGEKVSDESLELA--- 383

Query: 396 FDSTGNIKLSFGKK 409
             +TG   + FGK+
Sbjct: 384 --ATGVYVIQFGKR 395


>gi|152993327|ref|YP_001359048.1| tyrosyl-tRNA synthetase [Sulfurovum sp. NBC37-1]
 gi|151425188|dbj|BAF72691.1| tyrosyl-tRNA synthetase [Sulfurovum sp. NBC37-1]
          Length = 399

 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 112/379 (29%), Positives = 190/379 (50%), Gaps = 30/379 (7%)

Query: 37  TAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRS 96
           T   G+D T + LH GH   L  L   QK G +   L+G  T++IGDP+ + E+R+++  
Sbjct: 37  TVKAGFDPTGADLHLGHTVLLQKLRAFQKHGGRVQLLIGDFTAMIGDPTGKSETRKVLDR 96

Query: 97  QEIQENIEKIKG-IFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLS 155
             I EN +  +  +F+   K    KTD +   N +WL ++    ++  + + F+V RML 
Sbjct: 97  TTILENAQTYQDQVFNILDK---SKTDVVF--NSSWLEALGAAGMV-SLTTTFNVARMLE 150

Query: 156 FESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER 215
            +    R K  +S+S  EF Y +LQ YD VEL  +    +++GG+DQ  N++ G  L   
Sbjct: 151 RDDFEKRYKSGKSISISEFIYPLLQGYDSVELQSD----IEIGGTDQKFNLLMGRFLQRA 206

Query: 216 LKTPKLFA-LTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFA 273
            +  K  A L  P+L    G  KM K+L+  I + +   +P + +    ++ D  +  + 
Sbjct: 207 YEIDKEQAVLMMPILEGLDGVQKMSKSLNNYIGITE---APKDIYAKTLSVSDELMWRYY 263

Query: 274 KRLTTLPMSEIDRMAKLQGK---EINEAKKIIATEITTMVHGREEAEKAATAAMECFDMS 330
           + L+   + EI +M +   K       AK+ +A E+ T  +     E+ A  A E FD  
Sbjct: 264 ELLSERSLEEITQMKQDVEKGALHPKIAKENLALELVTRFYN----EELAKLAKEEFDNV 319

Query: 331 IHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQ 390
             +  +P+  + + EV  G+ +   +V AG   ST++ARR +K  A++I+   IS+EK+ 
Sbjct: 320 FKANQLPS-DMKEVEVEEGIWICKALVDAGIEPSTSQARRDIKQGAVRIDQEKISDEKMN 378

Query: 391 IKLQDFDSTGNIKLSFGKK 409
           ++      TG   L  GK+
Sbjct: 379 LE------TGEYILQVGKR 391


>gi|68249800|ref|YP_248912.1| tyrosyl-tRNA synthetase [Haemophilus influenzae 86-028NP]
 gi|145633010|ref|ZP_01788742.1| ribose-phosphate pyrophosphokinase [Haemophilus influenzae 3655]
 gi|229846285|ref|ZP_04466397.1| tyrosyl-tRNA synthetase [Haemophilus influenzae 7P49H1]
 gi|81335774|sp|Q4QL45|SYY_HAEI8 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|68057999|gb|AAX88252.1| tyrosyl-tRNA synthetase [Haemophilus influenzae 86-028NP]
 gi|144986236|gb|EDJ92815.1| ribose-phosphate pyrophosphokinase [Haemophilus influenzae 3655]
 gi|229811289|gb|EEP47006.1| tyrosyl-tRNA synthetase [Haemophilus influenzae 7P49H1]
          Length = 395

 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 108/381 (28%), Positives = 177/381 (46%), Gaps = 29/381 (7%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           ILSE   I ++   R L +          +G D TA  +H GH   L  L   Q+ GH+ 
Sbjct: 18  ILSEADLIEKLKENRPLKV---------KLGADPTAPDIHLGHTVVLNKLRQFQQLGHEV 68

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
             L+G  T ++GDPS ++ +R  +  +++  N E  K       K    +   ++ N+E 
Sbjct: 69  YFLIGDFTGMVGDPSGKNATRPPLSREDVLRNAETYK---EQIYKILDPQKTKIVFNSE- 124

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           WL  +    ++R + S ++V RML  +  + R    Q ++  EF Y +LQ YD V L   
Sbjct: 125 WLSKLGTEGMIR-LASNYTVARMLERDDFKKRFGNNQPIAIHEFIYPLLQGYDSVAL--- 180

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNK 249
            D  +++GG+DQ  N++ G +L +        A+T PLL    G  KM K+L   I + +
Sbjct: 181 -DADVELGGTDQKFNLLVGRELQKSAGKKPQVAITLPLLVGLDGEKKMSKSLGNYIGVTE 239

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATEIT 307
              +P + +    +I D  +  +   L+  P+SEI ++     +GK   + K ++A E+ 
Sbjct: 240 ---APSDMFGKVMSISDELMWDWYNLLSFRPLSEIAQLKSEVEKGKNPRDVKILLAKELI 296

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
              H  E A  A    +  F        MP  + S +     +GL TL+ +AG   ST+E
Sbjct: 297 ARFHNEEAANAAEQEFINRFQKGAMPDEMPEFTFSGE-----IGLATLLKEAGLVPSTSE 351

Query: 368 ARRHLKSNAIKINNSIISNEK 388
           A R  +   +KIN   + N K
Sbjct: 352 AIRSAQQGGVKINGEKVDNVK 372


>gi|119356645|ref|YP_911289.1| tyrosyl-tRNA synthetase [Chlorobium phaeobacteroides DSM 266]
 gi|119353994|gb|ABL64865.1| tyrosyl-tRNA synthetase [Chlorobium phaeobacteroides DSM 266]
          Length = 405

 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 103/366 (28%), Positives = 178/366 (48%), Gaps = 35/366 (9%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D +   LH GH   L  L   Q  GH+ I ++G  T++IGDPS + ++R  + ++E 
Sbjct: 44  LGADPSRPDLHLGHSVVLGKLRQFQDLGHEAILIIGDFTAMIGDPSGKSKTRPQLSAEEA 103

Query: 100 QENIEKIKGIFSSFIKYGTGKTDA---LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSF 156
           ++N     G+  S+ +  +   D     +  N  WL ++K+ D++R + S ++V RML  
Sbjct: 104 RQN-----GV--SYFEQASKILDPEKTTICYNADWLGAMKFADVIR-LSSHYTVARMLER 155

Query: 157 ESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL 216
           +    R +  + +S  EF Y + Q  D V L  +    +++GG+DQ  N++ G DL    
Sbjct: 156 DDFERRYRSNEPISIHEFLYPLAQGMDSVHLEND----VELGGTDQKFNLLVGRDLQREY 211

Query: 217 KTPKLFALTSPLLT-TASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKR 275
                  +T PLL  TA   KM K+L  A+  N     P + +    +I DA +  + K 
Sbjct: 212 GIKPQVCITMPLLVGTAGEEKMSKSLGNAVCFND---LPSDMYGKLLSIPDALIAPYCKL 268

Query: 276 LTTLPMSE------IDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDM 329
           L  LP         +DR+         +AK+ +A EI    +  E+A+ A T   + F  
Sbjct: 269 L--LPGGNANGNVILDRIV----DSPRDAKRTLAREIVAQYYSAEQADDAETHFDQVF-- 320

Query: 330 SIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKL 389
            +H +    I + + E S+ + L+ L+V  G  TS +EARR ++  A+ +N+  + +   
Sbjct: 321 -VHKKTPDNIELFEFE-SQSLPLVDLLVILGAYTSKSEARRMIQQKAVLVNDVKVEDTNT 378

Query: 390 QIKLQD 395
            + L+D
Sbjct: 379 LVALED 384


>gi|297624191|ref|YP_003705625.1| tyrosyl-tRNA synthetase [Truepera radiovictrix DSM 17093]
 gi|297165371|gb|ADI15082.1| tyrosyl-tRNA synthetase [Truepera radiovictrix DSM 17093]
          Length = 394

 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 92/356 (25%), Positives = 173/356 (48%), Gaps = 16/356 (4%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D ++  LH GH   L  +   Q  GHK + ++G  T+ IGDPS + ++R ++  ++ 
Sbjct: 35  LGVDPSSPDLHLGHAVVLRKMRDFQDAGHKVVLIIGDFTATIGDPSGKSKTRPVLSLEQT 94

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           + N E      +  +     K +  +  N  WL  + + +L++ + S ++V RML  +  
Sbjct: 95  RRNSESYVAQATKILDPNPDKLE--LRYNSEWLAPLGFAELIK-LASSYTVARMLERDDF 151

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R      +S  EF Y + QAYD V +  +    +++GG+DQ  N++ G D+       
Sbjct: 152 TKRYAAGVPISIHEFLYPLAQAYDSVAIRAD----VELGGTDQLFNLLVGRDVQRAYGQA 207

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
              ALT PLL    G  KM K+L   I + +   +P   ++    + DA +  + +  T+
Sbjct: 208 PQVALTMPLLEGLDGVEKMSKSLGNYIGVAE---APEVMFKKAMLVPDALLYRYFELCTS 264

Query: 279 LPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPT 338
            P+ E   + +   ++I EA ++ A E+  + HG E  ++A           I    +P 
Sbjct: 265 FPLGEARALIE---QDIKEAHRVFARELVRLYHGPEPIQEAEARYDHVAKGGI-PDDVPE 320

Query: 339 ISISKDEVSRG-MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL 393
           +++S D    G + +  L   AG +TS  +ARR +++  +K++  ++ +  LQ++L
Sbjct: 321 LTLSADATQDGVIWVCKLATLAGLSTSNGDARRLIQNRGLKLDGEVVEDVNLQVRL 376


>gi|222056668|ref|YP_002539030.1| tyrosyl-tRNA synthetase [Geobacter sp. FRC-32]
 gi|221565957|gb|ACM21929.1| tyrosyl-tRNA synthetase [Geobacter sp. FRC-32]
          Length = 403

 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 104/374 (27%), Positives = 186/374 (49%), Gaps = 25/374 (6%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   L  L   Q+ GH+   L+G  T +IGDP+ + E+R+++  +++ 
Sbjct: 42  GFDPTAPDLHLGHTVLLHKLRQFQQLGHEIYFLIGDFTGMIGDPTGKSETRKVLSREDVL 101

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           +N E  K       K    +   ++ N+E WL  +   D++  + S ++V RML  E   
Sbjct: 102 KNAETYK---EQVFKILDPEKTKVVFNSE-WLAKLSASDMIG-LASKYTVARMLEREDFN 156

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
           +R   +Q +S  EF Y ++Q YD V L  +    +++GG+DQ  N++ G +L        
Sbjct: 157 NRFSNQQPISIHEFMYPLIQGYDSVALKAD----VELGGTDQKFNLLVGRELQREWGQSP 212

Query: 221 LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTL 279
              +T PLL    G  KM K+L   I +N+        +    ++ D  ++ + + L+ +
Sbjct: 213 QTVITMPLLEGLDGVNKMSKSLGNYIGINEPAD---EIFGKIMSVSDELMLRYYELLSDM 269

Query: 280 PMSEIDRM-AKLQGKEIN--EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM 336
            M+ + ++   L+   ++  EAKK +  E+    HG+E A +A  + ++ F  +     M
Sbjct: 270 SMAALQQLKVDLKSGTVHPMEAKKRLGREMVARFHGQEAAAEAEESFVKRFRDNQTPDDM 329

Query: 337 PTISISKDEVSRGMGLLT-LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           P I ++  +   G  LL  L+ +AG   S +E RR ++   +K++   I++E L+I    
Sbjct: 330 PEIQMAAGD---GKILLARLLAEAGLVKSNSEGRRSIQGGGVKVDGEKINDENLEIP--- 383

Query: 396 FDSTGNIKLSFGKK 409
             S G + L  GK+
Sbjct: 384 --SAGQVILQVGKR 395


>gi|260580386|ref|ZP_05848215.1| tyrosyl-tRNA synthetase [Haemophilus influenzae RdAW]
 gi|260093063|gb|EEW76997.1| tyrosyl-tRNA synthetase [Haemophilus influenzae RdAW]
          Length = 395

 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 108/381 (28%), Positives = 176/381 (46%), Gaps = 29/381 (7%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           ILSE   I ++   R L +          +G D TA  +H GH   L  L   Q+ GH+ 
Sbjct: 18  ILSEADLIEKLKENRPLKV---------KLGADPTAPDIHLGHTVVLNKLRQFQQLGHEV 68

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
             L+G  T ++GDPS ++ +R  +  +++  N E  K       K    +   ++ N+E 
Sbjct: 69  YFLIGDFTGMVGDPSGKNATRPPLSREDVLRNAETYK---EQIYKILDPQKTKIVFNSE- 124

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           WL  +    ++R + S ++V RML  +  + R    Q ++  EF Y +LQ YD V L   
Sbjct: 125 WLSKLGTEGMIR-LASNYTVARMLERDDFKKRFGNNQPIAIHEFIYPLLQGYDSVAL--- 180

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNK 249
            D  +++GG+DQ  N++ G +L +        A+T PLL    G  KM K+L   I + +
Sbjct: 181 -DADVELGGTDQKFNLLVGRELQKSAGKKPQVAITLPLLVGLDGEKKMSKSLGNYIGVTE 239

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATEIT 307
              +P + +    +I D  +  +   L+  P++EI ++      GK   + K ++A E+ 
Sbjct: 240 ---APSDMFGKVMSISDELMWDWYNLLSFRPLNEIAQLKSEVENGKNPRDVKILLAKELI 296

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
              H  E A  A    +  F        MP  + S +     MGL TL+ +AG   ST+E
Sbjct: 297 ARFHNEEAANAAEQEFINRFQKGAMPDEMPEFTFSGE-----MGLATLLKEAGLVPSTSE 351

Query: 368 ARRHLKSNAIKINNSIISNEK 388
           A R  +   +KIN   + N K
Sbjct: 352 AIRSAQQGGVKINGEKVDNVK 372


>gi|229844790|ref|ZP_04464928.1| tyrosyl-tRNA synthetase [Haemophilus influenzae 6P18H1]
 gi|229812171|gb|EEP47862.1| tyrosyl-tRNA synthetase [Haemophilus influenzae 6P18H1]
          Length = 395

 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 108/381 (28%), Positives = 177/381 (46%), Gaps = 29/381 (7%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           ILSE   I ++   R L +          +G D TA  +H GH   L  L   Q+ GH+ 
Sbjct: 18  ILSEADLIEKLKENRPLKV---------KLGADPTAPDIHLGHTVVLNKLRQFQQLGHEV 68

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
             L+G  T ++GDPS ++ +R  +  +++  N E  K       K    +   ++ N+E 
Sbjct: 69  YFLIGDFTGMVGDPSGKNATRPPLSREDVLRNAETYK---EQIYKILDPQKTKIVFNSE- 124

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           WL  +    ++R + S ++V RML  +  + R    Q ++  EF Y +LQ YD V L   
Sbjct: 125 WLSKLGTEGMIR-LASNYTVARMLERDDFKKRFGNNQPIAIHEFIYPLLQGYDSVAL--- 180

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNK 249
            D  +++GG+DQ  N++ G +L +        A+T PLL    G  KM K+L   I + +
Sbjct: 181 -DADVELGGTDQKFNLLVGRELQKSAGKKPQVAITLPLLVGLDGEKKMSKSLGNYIGVTE 239

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATEIT 307
              +P + +    +I D  +  +   L+  P+SEI ++      GK   + K ++A E+ 
Sbjct: 240 ---APSDMFGKVMSISDELMWDWYNLLSFRPLSEIAQLKSEVENGKNPRDVKILLAKELI 296

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
           +  H  E A  A    +  F        MP  + S +     +GL TL+ +AG   ST+E
Sbjct: 297 SRFHNEEAANAAEQEFINRFQKGAMPDEMPEFTFSGE-----IGLATLLKEAGLVPSTSE 351

Query: 368 ARRHLKSNAIKINNSIISNEK 388
           A R  +   +KIN   + N K
Sbjct: 352 AIRSAQQGGVKINGEKVDNVK 372


>gi|221194508|ref|ZP_03567565.1| tyrosyl-tRNA synthetase [Atopobium rimae ATCC 49626]
 gi|221185412|gb|EEE17802.1| tyrosyl-tRNA synthetase [Atopobium rimae ATCC 49626]
          Length = 403

 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 110/386 (28%), Positives = 180/386 (46%), Gaps = 34/386 (8%)

Query: 36  VTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMR 95
           +T  +G D T+  LH GH   L  +   Q  GH    ++G GT++IGDPS RD +R  + 
Sbjct: 34  LTIKLGVDPTSPDLHLGHAVPLRKMRQFQDLGHNVTLIIGNGTALIGDPSGRDSTRPPLT 93

Query: 96  SQEIQENIEKIKGIFSSFIKYGTGKTDA---LMLNNETWLCSIKYIDLLREIGSFFSVNR 152
           S++I+ N +       ++++      D     +++N  W+  +  ++ +  + S F+V R
Sbjct: 94  SEQIEVNAQ-------TYVEQAMKILDPDRTTVVHNGDWIKPMN-LETMLSLMSKFTVAR 145

Query: 153 MLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL 212
           +L  E    R   +QS++  EF Y +LQAYD V +  +    ++MGG+DQ  N++ G DL
Sbjct: 146 ILEREDFSKRYHNQQSIALHEFIYPVLQAYDSVMIKAD----VEMGGNDQIFNLLAGRDL 201

Query: 213 GERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVS 271
                     ALT PLL    G  KM K+    I L  E   P + +    +I D  V  
Sbjct: 202 MRDEGMEPQIALTMPLLEGTDGVKKMSKSYGNYIGLTDE---PADMFGKIMSIPDELVAR 258

Query: 272 FAKRLTTLPMSEIDRM-AKLQGKEINE--AKKIIATEITTMVHGREEAEKAATAAMECFD 328
           + +  +TL + EID + A  +    +    K+ +   I  + HG   A+KAA A  E FD
Sbjct: 259 YYRLCSTLSIDEIDAIDASFEDGTADPYALKRALGRNIVELYHG---ADKAAQAE-EAFD 314

Query: 329 MSIHSQHMP--TISISKDEVSRGMGLL---TLIVKAGFATSTNEARRHLKSNAIKINNSI 383
                  +P      S + V    GL+    L+V+   + S  +ARR +    +KIN   
Sbjct: 315 ALFKKHEIPDDVAEFSVELVRNEQGLVYLPKLMVEVKLSASAGDARRLIDGGGVKINGEA 374

Query: 384 ISNEKLQIKLQDFDSTGNIKLSFGKK 409
           ++ +   +   D D   +  L  GK+
Sbjct: 375 LAPKSYNV---DPDLLDHAILQAGKR 397


>gi|254423652|ref|ZP_05037370.1| tyrosyl-tRNA synthetase [Synechococcus sp. PCC 7335]
 gi|196191141|gb|EDX86105.1| tyrosyl-tRNA synthetase [Synechococcus sp. PCC 7335]
          Length = 408

 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 106/375 (28%), Positives = 176/375 (46%), Gaps = 22/375 (5%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D T S +H GH T +  L   Q  GH  I L+G  T+ IGDP+ R E R+ +   ++
Sbjct: 50  LGIDPTGSEIHLGHSTLVRKLRAFQDAGHTAILLIGDFTARIGDPTDRAEVRKQLSEADV 109

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           + N E         + + T     +  N+E WL  I    +L E+ S  ++ +ML+ E  
Sbjct: 110 KANAETYIDQIKPILDFETPGRLEIRYNSE-WLSDIDLGKML-ELLSTMTLGQMLAKEGF 167

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
            +R ++   +   EF Y +LQ YD V L  +    +++GG+DQ  N+  G DL       
Sbjct: 168 ANRYEKGTPVYLHEFLYPLLQGYDSVALQSD----IELGGTDQKFNVTVGRDLQRHFGLQ 223

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
             F +  PLL    G+ KM K+L   + L ++   P   +     + DA +  +   LT 
Sbjct: 224 PQFGMLLPLLMGTDGSQKMSKSLGNYVGLQED---PLTMYSKLEKVPDALIDDYFTYLTD 280

Query: 279 LPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECF-DMSIHSQHMP 337
           LP+ ++    + Q       +K++A  +T + HG+  A +A   A+      +  +  +P
Sbjct: 281 LPLDQLPENPRDQ-------QKLLAKTVTGIFHGKAAAAQAQQDALTLMAGQTSAAASVP 333

Query: 338 TISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
             S+SK  V     L  L+       S++EARRH+K  A+K++   +S+  L  + Q  D
Sbjct: 334 EFSLSK--VGFPAKLFYLLGATPLCESSSEARRHIKGGAVKMDGEKMSDPNLTFE-QAED 390

Query: 398 STGNIKLSFGKKNHI 412
             G + L  GKK  +
Sbjct: 391 LEGKV-LQIGKKKFV 404


>gi|319956609|ref|YP_004167872.1| tyrosyl-tRNA synthetase [Nitratifractor salsuginis DSM 16511]
 gi|319419013|gb|ADV46123.1| tyrosyl-tRNA synthetase [Nitratifractor salsuginis DSM 16511]
          Length = 400

 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 110/376 (29%), Positives = 187/376 (49%), Gaps = 28/376 (7%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  LH GH   L  L   QK G     L+G  T++IGDP+ + E+R+++  + +
Sbjct: 41  LGLDPTAPDLHLGHTVILQKLAAFQKHGAIVQLLIGDFTAMIGDPTGKSETRKVLDRETV 100

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           ++N +  +    +F      KT+ LM N+ TWL ++   D L ++ + ++V RML  +  
Sbjct: 101 KQNAQTYQE--QAFKILDPEKTE-LMFNS-TWLDALG-ADGLIQLTTQYNVARMLERDDF 155

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R K  QS++  EF Y +LQ YD V +    +  +++GG+DQ  N++ G  L       
Sbjct: 156 EKRFKSGQSIAISEFLYPLLQGYDSVAM----ESDIELGGTDQKFNLLMGRHLQRAYGVG 211

Query: 220 KLFA-LTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT 277
           K  A L  P+L    G  KM K+L   + +++     Y       +I D  +  + + L+
Sbjct: 212 KEQAVLMMPILEGLDGVQKMSKSLGNYVGISEPAKEIYA---KILSISDELMWRYYELLS 268

Query: 278 TLPMSEIDRMAKLQGK---EINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQ 334
           +  + EI+ M K   +       AK+++A EIT   H  EEA+KA     E FD    ++
Sbjct: 269 SRSLEEIEEMKKQVAEGTLHPKRAKELLALEITARFHNEEEAQKAK----EAFDSLFKAR 324

Query: 335 HMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
            +P   I +  +  G+ +   +V AG   S ++ARR +K  A++I+   +S+E+L ++  
Sbjct: 325 QIPE-DIPEVTLEPGVWICKALVDAGLEPSNSQARRDIKQGAVRIDQEKVSDEQLTLE-- 381

Query: 395 DFDSTGNIKLSFGKKN 410
                G   L  GK+ 
Sbjct: 382 ----PGEYILQVGKRK 393


>gi|289432488|ref|YP_003462361.1| tyrosyl-tRNA synthetase [Dehalococcoides sp. GT]
 gi|288946208|gb|ADC73905.1| tyrosyl-tRNA synthetase [Dehalococcoides sp. GT]
          Length = 396

 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 100/369 (27%), Positives = 181/369 (49%), Gaps = 19/369 (5%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D ++  +H GH+  L  L  LQ  GH+ + ++G  T+ IGDPS    +R M+ +++++
Sbjct: 40  GFDPSSPDIHLGHMVALRKLRQLQDLGHQVVLIVGDWTAQIGDPSGASVTRPMLSAEQVK 99

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
            N    K     F K        +   +E W  + K  D++R + S F+V +ML+ +   
Sbjct: 100 AN---AKTYLEQFFKIVDKDKTEVRWQSE-WYGNFKLEDVVR-LSSKFTVAQMLARDDFA 154

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R    + +S  E  Y +LQAYD V +  +    ++ GG+DQ  N++ G +L E +    
Sbjct: 155 KRYAAGKPISVTELLYPMLQAYDSVMVKSD----VEFGGTDQKFNLLVGRELQEMVGQKP 210

Query: 221 LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTL 279
              L  P+L    G  KM K+L   I + ++   P + +    +I D  ++ + + +T +
Sbjct: 211 QQVLMVPILVGTDGVHKMSKSLGNYIGVAED---PSDIFGKCMSIPDELILQYFELVTDI 267

Query: 280 PMSEI-DRMAKLQGKEINEA--KKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM 336
           P  EI D  A+++  ++N    KK +A+E+ T ++    A++A              + M
Sbjct: 268 PDQEIADFKAQMENGQVNPMILKKRLASELITQLYNATAAQEADARFTRVVQRGEIPEDM 327

Query: 337 PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
           P   +   E  +  G++  I+ +G A S +EARR L+  A++IN+  IS++   +K  D 
Sbjct: 328 PECRL---ENGQNTGVIDFIILSGLAKSKSEARRLLEQGAVEINSEKISDQNTPVKCGDI 384

Query: 397 DSTGNIKLS 405
              G  + S
Sbjct: 385 IKAGKRRYS 393


>gi|57167617|ref|ZP_00366757.1| tyrosyl-tRNA synthetase [Campylobacter coli RM2228]
 gi|57020739|gb|EAL57403.1| tyrosyl-tRNA synthetase [Campylobacter coli RM2228]
          Length = 401

 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 117/378 (30%), Positives = 183/378 (48%), Gaps = 36/378 (9%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   L  + +LQK G     L+G  T  IGDPS +  +R+ +  +++ 
Sbjct: 42  GFDPTAPDLHLGHSVVLTKMAYLQKHGAIVQFLIGDFTGQIGDPSGKSVTRKKLDKEQVL 101

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           +N    K       K    +   L  N++ WL  +    ++ E+ S FSV RML  +   
Sbjct: 102 QN---AKTYEEQVFKILDPQKTQLKFNSQ-WLNELGATGIV-ELTSTFSVARMLERDDFT 156

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R K +  +S  EF Y +LQ YD V L     C ++MGG+DQ  N++ G  L       K
Sbjct: 157 KRFKEQSPISICEFLYPLLQGYDSVALK----CDIEMGGTDQKFNLLMGRTLQRIYNIGK 212

Query: 221 -LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               +  PLL    G  KM K+L   I + ++     + +    +I D  +  + + L+T
Sbjct: 213 EQVVMMMPLLEGLDGVNKMSKSLGNYIGVTEKAN---DMYAKILSISDELMWRYYELLST 269

Query: 279 LPMSEIDRMAKLQGKEINE-------AKKIIATEITTMVHGREEAEKAATAAMECFDMSI 331
             + EI+ M     KEI+        AK+ +A EITT  H  EE+ KAA A    FD S+
Sbjct: 270 KSLEEIENMK----KEISSGNLHPKLAKENLALEITTRFHN-EESAKAAKAE---FD-SV 320

Query: 332 HSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
           HS +     I + ++   + L   +V+ G   ST+ ARR + +NA+ +N+  +S+E++Q+
Sbjct: 321 HSGNALPSDIKEFKIEGEIWLAKALVECGLENSTSAARRSINANAVSVNSQKVSDEQMQL 380

Query: 392 KLQDFDSTGNIKLSFGKK 409
                  TG   L  GK+
Sbjct: 381 ------GTGEYILQVGKR 392


>gi|269123481|ref|YP_003306058.1| tyrosyl-tRNA synthetase [Streptobacillus moniliformis DSM 12112]
 gi|268314807|gb|ACZ01181.1| tyrosyl-tRNA synthetase [Streptobacillus moniliformis DSM 12112]
          Length = 402

 Score =  130 bits (326), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 104/378 (27%), Positives = 181/378 (47%), Gaps = 24/378 (6%)

Query: 10  SILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
            I+SE  F  ++ N      + +   +   +G D T S LH GH   +  L   Q  GH+
Sbjct: 23  EIISEEEFKKKLENS-----IRNNKPLKVKLGIDPTGSELHIGHAVPIRKLKQFQDLGHE 77

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
              L+G  T+ IGDP+ + E+R+M+  + IQENI+     +   +K         ++ N 
Sbjct: 78  VNFLIGTFTARIGDPTGKSETRKMLSFETIQENIK----TYLEQVKIILDLNKIKVVYNH 133

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
            WL  +K    + ++ S F+V++M+  E    RL   Q +S +EF Y ILQ YD V L  
Sbjct: 134 EWLEKLKLE-EVLKLLSMFTVSQMIQREDFSKRLSNNQPVSLIEFTYPILQGYDSVAL-- 190

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLN 248
             +  +++G ++Q  N++ G DL +     +   +  P+L    G  KM K+L   I + 
Sbjct: 191 --EADVELGATEQKFNLLRGRDLQKNFNQEQQICMIMPILVGLDGVEKMSKSLGNYISIQ 248

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITT 308
               SP + +    +I D  ++++ + +T LP+ E+  M K Q     + KK +  E+  
Sbjct: 249 ---DSPNDMFGKIMSISDELMLNYYEMITDLPLDEVKEMLKTQHP--MDCKKKLGYELVK 303

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
             +G + A ++       F     +  +P I I ++E    +  L L+ K  F +S +E 
Sbjct: 304 EYYGEQVAIESKAWFENVFSNRNLNVELPEIKIVENE----LAALELLSKLNFISSNSEG 359

Query: 369 RRHLKSNAIKINNSIISN 386
           RR +   A+K+N+ II +
Sbjct: 360 RRLIDQGAMKVNDVIIKD 377


>gi|313672274|ref|YP_004050385.1| tyrosyl-tRNA synthetase [Calditerrivibrio nitroreducens DSM 19672]
 gi|312939030|gb|ADR18222.1| tyrosyl-tRNA synthetase [Calditerrivibrio nitroreducens DSM 19672]
          Length = 400

 Score =  129 bits (325), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 111/376 (29%), Positives = 183/376 (48%), Gaps = 31/376 (8%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   +  +   Q  GH  I L+G  T +IGDP+ + E+R+ +  +E+ 
Sbjct: 43  GFDPTAPDLHLGHTVLIQKMKHFQDLGHHVIFLIGDFTGLIGDPTGKSETRKALTIEEVL 102

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           +N E  K     F      KT+     N  W+  +   D+++ + S ++V RML  +   
Sbjct: 103 KNAETYKE--QVFKILDPAKTEIAF--NSHWMGKMTSYDMIK-LASSYTVARMLERDDFA 157

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL--KT 218
            R    + +S  EF Y ++Q YD V L  +    +++GG+DQ  N++ G DL +R+  + 
Sbjct: 158 KRYSSGKPISIHEFLYPLVQGYDSVALKSD----VELGGTDQKFNLLVGRDL-QRMNGQN 212

Query: 219 PKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT 277
           P++ ALT P+L    G  KM K+L   + + ++   P + +    +I D  +  +   L+
Sbjct: 213 PQI-ALTVPILEGLDGVQKMSKSLGNYVGITEK---PTDMFGKIMSISDQLMFRYYLLLS 268

Query: 278 TLPMSEIDRMAK-LQGKEIN--EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQ 334
              + E++R+   ++  +I+  +AKK +A EI    HG  EA++A     E F+     +
Sbjct: 269 DKSLEEVERIKNGVESGKIHPMDAKKDLAEEIVKRFHGYVEAKRAR----EWFEQVFTKK 324

Query: 335 HMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
            +P   I   E      L+ +I K GFA S +E RR   + AI IN   I N  L +   
Sbjct: 325 EIPD-DIKLFEGKSDEKLIDIIKKLGFAPSNSEVRRLATAGAITINGEKIENVDLSL--- 380

Query: 395 DFDSTGNIKLSFGKKN 410
                G   L  GK+N
Sbjct: 381 ---GAGEFILKVGKRN 393


>gi|145630984|ref|ZP_01786760.1| tyrosyl-tRNA synthetase [Haemophilus influenzae R3021]
 gi|144983451|gb|EDJ90927.1| tyrosyl-tRNA synthetase [Haemophilus influenzae R3021]
          Length = 385

 Score =  129 bits (325), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 108/381 (28%), Positives = 176/381 (46%), Gaps = 29/381 (7%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           ILSE   I ++   R L +          +G D TA  +H GH   L  L   Q+ GH+ 
Sbjct: 18  ILSEADLIEKLKENRPLKV---------KLGADPTAPDIHLGHTVVLNKLRQFQQLGHEV 68

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
             L+G  T ++GDPS ++ +R  +  +++  N E  K       K    +   ++ N+E 
Sbjct: 69  YFLIGDFTGMVGDPSGKNATRPPLSREDVLRNAETYK---EQIYKILDPQKTKIVFNSE- 124

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           WL  +    ++R + S ++V RML  +  + R    Q ++  EF Y +LQ YD V L   
Sbjct: 125 WLSKLGTEGMIR-LASNYTVARMLERDDFKKRFGNNQPIAIHEFIYPLLQGYDSVAL--- 180

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNK 249
            D  +++GG+DQ  N++ G +L +        A+T PLL    G  KM K+L   I + +
Sbjct: 181 -DADVELGGTDQKFNLLVGRELQKSAGKKPQVAITLPLLVGLDGEKKMSKSLGNYIGVTE 239

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATEIT 307
              +P + +    +I D  +  +   L+  P+SEI ++      GK   + K ++A E+ 
Sbjct: 240 ---APSDMFGKVMSISDELMWDWYNLLSFRPLSEIAQLKSEVENGKNPRDVKILLAKELI 296

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
              H  E A  A    +  F        MP  + S +     +GL TL+ +AG   ST+E
Sbjct: 297 ARFHNEEAANAAEQEFINRFQKGAMPDEMPEFTFSGE-----IGLATLLKEAGLVPSTSE 351

Query: 368 ARRHLKSNAIKINNSIISNEK 388
           A R  +   +KIN   + N K
Sbjct: 352 AIRSAQQGGVKINGEKVDNVK 372


>gi|319776501|ref|YP_004138989.1| tyrosyl-tRNA synthetase [Haemophilus influenzae F3047]
 gi|317451092|emb|CBY87325.1| tyrosyl-tRNA synthetase [Haemophilus influenzae F3047]
          Length = 395

 Score =  129 bits (325), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 108/381 (28%), Positives = 178/381 (46%), Gaps = 29/381 (7%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           ILSE   I ++   R L +          +G D TA  +H GH   L  L   Q+ GH+ 
Sbjct: 18  ILSEADLIEKLKENRPLKV---------KLGADPTAPDIHLGHTVVLNKLRQFQQLGHEV 68

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
             L+G  T ++GDPS ++ +R  +  +++  N E  K       K    +   ++ N+E 
Sbjct: 69  YFLIGDFTGMVGDPSGKNATRPPLSREDVLRNAETYK---EQIYKILDPQKTKIVFNSE- 124

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           WL  +    ++R + S ++V RML  +  + R    Q ++  EF Y +LQ YD V L   
Sbjct: 125 WLSKLGTEGMIR-LTSNYTVARMLERDDFKKRFGNNQPIAIHEFIYPLLQGYDSVAL--- 180

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNK 249
            D  +++GG+DQ  N++ G +L +        A+T PLL    G  KM K+L   I + +
Sbjct: 181 -DADVELGGTDQKFNLLVGRELQKSAGKKPQVAITLPLLVGLDGEKKMSKSLGNYIGVTE 239

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATEIT 307
              +P + +    +I D  +  +   L+  P+SEI ++     +GK   + K ++A E+ 
Sbjct: 240 ---APSDMFGKVMSISDELMWDWYNLLSFRPLSEIAQLKSEVEKGKNPRDVKILLAKELI 296

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
              H  E A  A    +  F        MP  + S +     +GL TL+ +AG   ST+E
Sbjct: 297 ARFHNEEAANAAEQEFINRFQKGAMPDEMPEFTFSGE-----IGLATLLKEAGLVPSTSE 351

Query: 368 ARRHLKSNAIKINNSIISNEK 388
           A R  +   +KIN   ++N K
Sbjct: 352 AIRSAQQGGVKINGEKVNNVK 372


>gi|291278546|ref|YP_003495381.1| tyrosyl-tRNA synthetase [Deferribacter desulfuricans SSM1]
 gi|290753248|dbj|BAI79625.1| tyrosyl-tRNA synthetase [Deferribacter desulfuricans SSM1]
          Length = 400

 Score =  129 bits (325), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 101/364 (27%), Positives = 173/364 (47%), Gaps = 28/364 (7%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   +  L   Q  GH+ I L+G  T +IGDP+ + E+R+ +  +E+ 
Sbjct: 43  GFDPTAPDLHLGHTVLIQKLKHFQDLGHQVIFLIGDFTGMIGDPTGKSETRKALSREEVL 102

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           +N E  K     F      KT+     N  W+  +   D+++ + S ++V RML  +   
Sbjct: 103 KNAETYKE--QVFKILDPEKTEVAF--NSQWMDKMTSYDMIK-LASKYTVARMLERDDFS 157

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R    + +S  EF Y ++Q YD V L  +    +++GG+DQ  N++ G DL        
Sbjct: 158 KRFSTNKPISIHEFLYPLVQGYDSVALRAD----VELGGTDQKFNLLVGRDLQRDYGQEP 213

Query: 221 LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTL 279
             A+T P+L    G  KM K+L   + + ++   P+  +    +I D  +  +   L+  
Sbjct: 214 QIAITMPILEGLDGVQKMSKSLGNYVGITED---PFTMFSKIMSISDELMFRYYLLLSDK 270

Query: 280 PMSEIDRM-AKLQGKEIN--EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM 336
              EI+RM + ++  +++  E KK +A EI T  H   +A++A     + F        +
Sbjct: 271 SEDEINRMKSDIENGKLHPMEVKKALAAEIVTRFHSTNDAKEAREKFEKLFSKKEIPDDL 330

Query: 337 PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNS-------IISNEKL 389
           P  ++ K     G+ L+ +I    F +S +E RR     AI IN +       II +E+ 
Sbjct: 331 PEYTLEK-----GLKLIDIIKNINFVSSNSEIRRLASQGAIYINGNRVEDIYKIIEDEEF 385

Query: 390 QIKL 393
            +K+
Sbjct: 386 VLKV 389


>gi|302391198|ref|YP_003827018.1| tyrosyl-tRNA synthetase [Acetohalobium arabaticum DSM 5501]
 gi|302203275|gb|ADL11953.1| tyrosyl-tRNA synthetase [Acetohalobium arabaticum DSM 5501]
          Length = 410

 Score =  129 bits (325), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 101/361 (27%), Positives = 171/361 (47%), Gaps = 17/361 (4%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  L   Q  GH+ I L+G  T  IGDPS + ++R  +  +E+
Sbjct: 45  LGLDPTAPDIHLGHTVVLQKLKQFQDLGHEVILLIGDFTGRIGDPSGKSKTRPQLTEEEV 104

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
            EN    K       K        L+ N+E WL  + + D+L  + S ++V RML  E  
Sbjct: 105 MEN---AKTYQEQIFKVLDPDKTRLVFNSE-WLGEMDFADVLN-LSSKYTVARMLEREDF 159

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
            +R +  QS+   EF Y ++Q YD V +    +  +++GG+DQ  N++ G  L +     
Sbjct: 160 SNRYENNQSIGVHEFFYPLMQGYDSVAI----EADVELGGTDQKFNLLVGRRLQKEYGQD 215

Query: 220 KLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               L  PLL    G  KM K+L   I ++ +   P + +    +I D  +  + + LT 
Sbjct: 216 PQVILMMPLLEGLDGEQKMSKSLGNYIGIDDD---PNDMYGKVMSIPDKLLGRYFELLTD 272

Query: 279 LPMSEIDRMAK-LQGKEIN--EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQH 335
           + + E++ +   L   E++  E KK +A  I    +    A+KAA      F      + 
Sbjct: 273 VSLEELEEIKNGLSSGELHPMETKKRLAETIVAKYYDETTAKKAAREFERVFKDGELPED 332

Query: 336 MPTISISKDEVSRG-MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
           +P + +S D +  G + ++ L+   G   S ++ARR +K  A+KI+        L ++++
Sbjct: 333 IPQVELSSDRLEDGELWIVKLVAATGLVDSNSQARRMIKQGAVKIDGEKYDKMNLDLEVE 392

Query: 395 D 395
           D
Sbjct: 393 D 393


>gi|319897278|ref|YP_004135473.1| tyrosyl-tRNA synthetase [Haemophilus influenzae F3031]
 gi|317432782|emb|CBY81147.1| tyrosyl-tRNA synthetase [Haemophilus influenzae F3031]
          Length = 395

 Score =  129 bits (324), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 108/381 (28%), Positives = 176/381 (46%), Gaps = 29/381 (7%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           ILSE   I ++   R L +          +G D TA  +H GH   L  L   Q+ GH+ 
Sbjct: 18  ILSETDLIEKLKENRPLKV---------KLGADPTAPDIHLGHTVVLNKLRQFQQLGHEV 68

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
             L+G  T ++GDPS ++ +R  +  +++  N E  K       K    +   ++ N+E 
Sbjct: 69  YFLIGDFTGMVGDPSGKNATRPPLSREDVLRNAETYK---EQIYKILDPQKTKIVFNSE- 124

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           WL  +    ++R + S ++V RML  +  + R    Q ++  EF Y +LQ YD V L   
Sbjct: 125 WLSKLGTEGMIR-LASNYTVARMLERDDFKKRFGNNQPIAIHEFIYPLLQGYDSVAL--- 180

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNK 249
            D  +++GG+DQ  N++ G +L +        A+T PLL    G  KM K+L   I + +
Sbjct: 181 -DADVELGGTDQKFNLLVGRELQKSAGKKPQVAITLPLLVGLDGEKKMSKSLGNYIGVTE 239

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATEIT 307
              +P + +    +I D  +  +   L+  P+SEI ++      GK   + K ++A E+ 
Sbjct: 240 ---APSDMFGKVMSISDELMWDWYNLLSFRPLSEIAQLKSEVENGKNPRDVKILLAKELI 296

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
              H  E A  A    +  F        MP  + S +     +GL TL+ +AG   ST+E
Sbjct: 297 ARFHNEEAANAAEQEFINRFQKGAMPDEMPEFTFSGE-----IGLATLLKEAGLVPSTSE 351

Query: 368 ARRHLKSNAIKINNSIISNEK 388
           A R  +   +KIN   + N K
Sbjct: 352 AIRSAQQGGVKINGEKVDNVK 372


>gi|322418401|ref|YP_004197624.1| tyrosyl-tRNA synthetase [Geobacter sp. M18]
 gi|320124788|gb|ADW12348.1| tyrosyl-tRNA synthetase [Geobacter sp. M18]
          Length = 403

 Score =  129 bits (324), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 103/355 (29%), Positives = 176/355 (49%), Gaps = 18/355 (5%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   L  +   QK GH+   L+G  T +IGDP+ + E+R+++  +++ 
Sbjct: 42  GFDPTAPDLHLGHTVLLHKMRQFQKLGHEVHFLIGDFTGMIGDPTGKSETRKVLTREDVL 101

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           +N E  K       K    K   ++ N+E WL  +   D++  + S ++V RML  E   
Sbjct: 102 KNAETYK---EQVFKILDPKLTKVVFNSE-WLGKLSASDMIG-LASKYTVARMLEREDFS 156

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
           +R   +  +S  EF Y ++Q YD V L  +    +++GG+DQ  N++ G +L        
Sbjct: 157 NRFANQLPISIHEFMYPLVQGYDSVALKAD----VELGGTDQKFNLLVGRELQREWGQAP 212

Query: 221 LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTL 279
              +T PLL    G  KM K+L   I +N+     Y       +I D  +V + + L+ L
Sbjct: 213 QCVITMPLLEGLDGVNKMSKSLGNYIGINEPADEIYG---KVMSISDQLMVRYYELLSDL 269

Query: 280 PMSEIDRM-AKLQGKEIN--EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM 336
            M+E +++ A L+G  ++  EAKK +A E+    HG E A  A    ++ F  +     M
Sbjct: 270 TMAEFEQLKADLKGGALHPMEAKKQLAREMVARYHGAEAAALAGENFVKRFKNNETPDEM 329

Query: 337 PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
           P  ++  +     + L  ++ +A    S +E RR ++   +K+N   +S+E L+I
Sbjct: 330 PEFTLKPE--GEKVLLCKVLAEAQLTKSNSEGRRSIQGGGVKVNGDKVSDENLEI 382


>gi|15602620|ref|NP_245692.1| tyrosyl-tRNA synthetase [Pasteurella multocida subsp. multocida
           str. Pm70]
 gi|81637009|sp|Q9CMQ8|SYY_PASMU RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|12721053|gb|AAK02839.1| TyrS [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 395

 Score =  129 bits (324), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 106/385 (27%), Positives = 180/385 (46%), Gaps = 29/385 (7%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           ILSE   I ++   R L +          +G D TA  +H GH   L  L   Q+ GH+ 
Sbjct: 18  ILSEADLIEKLKENRPLRV---------KLGADPTAPDIHLGHTVVLNKLRQFQQFGHEV 68

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           I L+G  T ++GDPS ++ +R  +   ++  N E  K      +     +    ++ N +
Sbjct: 69  IFLIGDFTGMVGDPSGKNTTRPPLSRDDVLRNAETYKQQIYKILDPQKTR----IVFNSS 124

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           WL  +    ++R + S ++V RML  +  + R    Q ++  EF Y +LQ YD V L   
Sbjct: 125 WLGELGTEGMIR-LTSNYTVARMLERDDFKKRFSNNQPIAIHEFIYPLLQGYDSVAL--- 180

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNK 249
            D  +++GG+DQ  N++ G +L +        A+T PLL    G  KM K+L   I + +
Sbjct: 181 -DADIELGGTDQKFNLLVGRELQKSAGQKPQVAITLPLLVGLDGEKKMSKSLGNYIGVAE 239

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATEIT 307
              SP   +    +I D  +  +   L+  P++EI ++ +    G+   + K ++A E+ 
Sbjct: 240 ---SPTEMFGKVMSISDELMWDWYDLLSFRPLTEIAQLKQEVENGRNPRDIKVLLAKELI 296

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
              H   +AE A    +  F      + MP ++   +     MGL  L+ +AG   ST+E
Sbjct: 297 ARFHSEADAEAAEQEFINRFQKGAMPEDMPELTFEGE-----MGLANLLKEAGLVASTSE 351

Query: 368 ARRHLKSNAIKINNSIISNEKLQIK 392
           A R ++   +KI+   + + KL IK
Sbjct: 352 ANRMVQQGGVKIDGEKVEDAKLVIK 376


>gi|148828405|ref|YP_001293158.1| tyrosyl-tRNA synthetase [Haemophilus influenzae PittGG]
 gi|148719647|gb|ABR00775.1| tyrosyl-tRNA synthetase [Haemophilus influenzae PittGG]
          Length = 395

 Score =  129 bits (324), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 108/381 (28%), Positives = 176/381 (46%), Gaps = 29/381 (7%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           ILSE   I ++   R L +          +G D TA  +H GH   L  L   Q+ GH+ 
Sbjct: 18  ILSEADLIEKLKENRPLKV---------KLGADPTAPDIHLGHTVVLNKLRQFQQLGHEV 68

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
             L+G  T ++GDPS ++ +R  +  +++  N E  K       K    +   ++ N+E 
Sbjct: 69  YFLIGDFTGMVGDPSGKNATRPPLSREDVLRNAETYK---EQIYKILDPQKTKIVFNSE- 124

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           WL  +    ++R + S ++V RML  +  + R    Q ++  EF Y +LQ YD V L   
Sbjct: 125 WLSKLGTEGMIR-LASNYTVARMLERDDFKKRFGNNQPIAIHEFIYPLLQGYDSVAL--- 180

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNK 249
            D  +++GG+DQ  N++ G +L +        A+T PLL    G  KM K+L   I + +
Sbjct: 181 -DADVELGGTDQKFNLLVGRELQKSAGKKPQVAITLPLLVGLDGEKKMSKSLGNYIGVTE 239

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATEIT 307
              +P + +    +I D  +  +   L+  P+SEI ++      GK   + K ++A E+ 
Sbjct: 240 ---APSDMFGKVMSISDELMWDWYNLLSFRPLSEIAQLKSEVENGKNPRDVKILLAKELI 296

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
              H  E A  A    +  F        MP  + S +     +GL TL+ +AG   ST+E
Sbjct: 297 ARFHNEEAANAAEQEFINRFQKGAMPDEMPEFTFSGE-----IGLATLLKEAGLVPSTSE 351

Query: 368 ARRHLKSNAIKINNSIISNEK 388
           A R  +   +KIN   + N K
Sbjct: 352 AIRSAQQGGVKINGEKVDNVK 372


>gi|256831133|ref|YP_003159861.1| tyrosyl-tRNA synthetase [Desulfomicrobium baculatum DSM 4028]
 gi|256580309|gb|ACU91445.1| tyrosyl-tRNA synthetase [Desulfomicrobium baculatum DSM 4028]
          Length = 398

 Score =  129 bits (324), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 114/378 (30%), Positives = 176/378 (46%), Gaps = 35/378 (9%)

Query: 15  RGFIHQISNPRELDILCSQGV-VTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG + +I N  EL     +GV +    G+D TA  LH GH   +  L   Q+ GH+ I L
Sbjct: 15  RGSV-EIINEEELVAKLRRGVPLRIKAGFDPTAPDLHLGHTVLIQKLKHFQELGHQVIFL 73

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
           +G  T +IGDPS + E+R+ +  +E+  N E  K     F      +T+     N TW+ 
Sbjct: 74  IGDFTGMIGDPSGKSETRKKLTREEVLRNAETYKK--QIFKILDQDRTEIAF--NSTWMD 129

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDC 193
           +    + + E+ S ++V RML  +    R K  Q +S  EF Y ++Q YD V L  +   
Sbjct: 130 TFSAAEFI-ELCSRYTVARMLERDDFEKRFKGNQPISIHEFLYPLVQGYDSVALKAD--- 185

Query: 194 RLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMT 252
            +++GG+DQ  N++ G  L           LT P+L    G  KM K+L   I +++   
Sbjct: 186 -VELGGTDQKFNLLMGRHLQREHGQASQIVLTMPILEGLDGVQKMSKSLGNYIGIDEAPG 244

Query: 253 SPYN---------FWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIA 303
             +           W+Y+  + D+ +    +R+ TL   E  +   L  K    AK+ +A
Sbjct: 245 DMFGKLMSISDELMWRYYELLSDSSL----ERIGTL--REQVQSGALHPK---VAKEDLA 295

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
            EITT  HG E    A  AA E F+     Q +P   I    V  G  L+ ++  +G  +
Sbjct: 296 QEITTRFHGAE----AGVAAREAFNSVFAKQGIPE-DIEVFSVQAGALLVDVLSDSGVCS 350

Query: 364 STNEARRHLKSNAIKINN 381
           S  +ARR  K NA+ I+ 
Sbjct: 351 SKGDARRMCKQNAVTIDG 368


>gi|332981744|ref|YP_004463185.1| tyrosyl-tRNA synthetase [Mahella australiensis 50-1 BON]
 gi|332699422|gb|AEE96363.1| tyrosyl-tRNA synthetase [Mahella australiensis 50-1 BON]
          Length = 404

 Score =  129 bits (324), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 101/384 (26%), Positives = 184/384 (47%), Gaps = 32/384 (8%)

Query: 36  VTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMR 95
           +T  +G D +A  +H GH   L  L   Q  GH+ + ++G  T +IGDP+ + E+R+ + 
Sbjct: 37  LTIKLGLDPSAPDIHMGHTVVLRKLKQFQDLGHQIVLIIGDFTGMIGDPTGKSETRKQLT 96

Query: 96  SQEIQEN-------IEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFF 148
            +++ EN       I KI     + I++           N  WL  + + D++  + S +
Sbjct: 97  REQVLENAKTYQKQIYKILDPDRTIIRF-----------NSEWLAKLSFEDVIV-LCSKY 144

Query: 149 SVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIIC 208
           +V+RML  E  + R++ +Q +S  EF Y ++QAYD + LA +    +++GG+DQ  NI+ 
Sbjct: 145 TVSRMLEREDFKKRMESQQPISIHEFFYPLMQAYDSIALAAD----VELGGTDQKFNILM 200

Query: 209 GIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDA 267
           G  L          A+  P+L    G  KM K+L   I +N+   SP   +    +I D 
Sbjct: 201 GRTLQREYGQEPQVAMLMPILEGTDGVKKMSKSLGNYIGINE---SPDEIYGKTMSIPDE 257

Query: 268 DVVSFAKRLTTLPMSEIDRM-AKLQGKEIN--EAKKIIATEITTMVHGREEAEKAATAAM 324
            ++ + + LT +   +++ +  +++   +N  + K  +A E+ T+ HG + A+ A    +
Sbjct: 258 LIIRYYELLTDIHPDKLNELKEQMESSLLNPRDVKMALAKELVTLYHGAQAAQAAEKQFV 317

Query: 325 ECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSII 384
             F        +  I +  D +   + L   +     A +++E RR ++  A+KIN    
Sbjct: 318 SIFQKGDIPDDIEEIKVPADVLKDSIWLPRFLADHKLAPTSSEGRRLIQQGAVKINGQKS 377

Query: 385 SNEKLQIKLQDFDSTGNIKLSFGK 408
           S E +++K  D    G  K  F K
Sbjct: 378 SEENVRLKSGDIIQVG--KRRFAK 399


>gi|257126985|ref|YP_003165099.1| tyrosyl-tRNA synthetase [Leptotrichia buccalis C-1013-b]
 gi|257050924|gb|ACV40108.1| tyrosyl-tRNA synthetase [Leptotrichia buccalis C-1013-b]
          Length = 412

 Score =  129 bits (324), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 102/361 (28%), Positives = 177/361 (49%), Gaps = 23/361 (6%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D T S LH GH   L  L   Q  GH+ + L+G  T  IGDP+ + E+R+M+  +++
Sbjct: 53  LGIDPTGSELHLGHAVPLRKLKQFQDLGHEVLFLIGTFTGRIGDPTGKSETRKMLSEEQV 112

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
            ENI+     +   +K         ++ N  WL  +   D L  + S F+V++M+S E  
Sbjct: 113 SENIK----TYLDQVKLILDLDKINVVYNADWLEKLSLSDALN-LLSQFTVSQMISREDF 167

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             RL   + +S +EF Y ILQ YD VEL  +    +++G ++Q  N++ G DL +     
Sbjct: 168 SKRLAENKPVSLIEFMYPILQGYDSVELKAD----VELGATEQKFNLLRGRDLQKNFGQE 223

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
           +   +  P+L    G  KM K+L   I +     +P + +    +I D  + ++   +T 
Sbjct: 224 QQVCMIMPILVGLDGVEKMSKSLGNYIGVK---DTPNDMFGKVMSISDELMENYYTMITD 280

Query: 279 LPMSEIDRMAKLQGKEIN----EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQ 334
           +P   I+ + K+Q  + +    EAKK +  E+  + +G E A++A       F     + 
Sbjct: 281 VPFERIEEI-KVQIADGSLHPMEAKKQLGAEVVKIYYGEEAAKEARDWFENVFSKRNLNV 339

Query: 335 HMPTISISKDEVSRGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL 393
            +P + +   EV    G++ L+VK      +T+EARR ++    KIN+  I + K  + L
Sbjct: 340 DLPEVELEYKEV----GIIDLLVKETELLQTTSEARRLIQQGGFKINDEPIKDVKATVIL 395

Query: 394 Q 394
           +
Sbjct: 396 E 396


>gi|15645393|ref|NP_207567.1| tyrosyl-tRNA synthetase [Helicobacter pylori 26695]
 gi|3024675|sp|P56417|SYY_HELPY RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|2313900|gb|AAD07821.1| tyrosyl-tRNA synthetase (tyrS) [Helicobacter pylori 26695]
          Length = 402

 Score =  129 bits (324), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 106/377 (28%), Positives = 182/377 (48%), Gaps = 34/377 (9%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   +  L  LQ+ G +   L+G  T++IGDP+ ++E+R+ +  +++ 
Sbjct: 44  GFDPTAPDLHLGHTVLIQKLALLQQYGARVKFLIGDFTAMIGDPTGKNETRKPLNREQVL 103

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           EN +     +   I     +    +  N TWL ++    ++ E+ + FSV RML  +   
Sbjct: 104 ENAK----TYEEQIYKILDEKHTEVCFNSTWLDALGAKGMI-ELCAKFSVARMLERDDFT 158

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R K  + +S +EF Y +LQ YD V +    D  +++GG+DQ  N++ G  L       K
Sbjct: 159 KRYKENRPISIVEFLYPLLQGYDSVAM----DADIELGGNDQKFNLLVGRFLQRAYGLNK 214

Query: 221 -LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               +T PLL    G  KM K+L   + + +E   P   +    ++ D  +  +   L+T
Sbjct: 215 EQSVITMPLLEGLDGVQKMSKSLGNYVGITEE---PNAMFGKIMSVSDDLMWRYYTLLST 271

Query: 279 LPMSEIDRMAK------LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIH 332
             + EI+ +        L  K + E    +A+EI    +  ++A KA     E F     
Sbjct: 272 KTLEEIEDLKHGILNQTLHPKAVKED---LASEIVARYYDNDQAIKAK----EQFSKVFS 324

Query: 333 SQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
           +  +P I +S+ +   G+G+L ++ + GF  ST++ARR ++   +KIN  +I NE  +  
Sbjct: 325 ANLLPEI-LSESDFDEGVGILDVLKQIGFCPSTSQARRDIQGGGVKINQEVIKNESYRF- 382

Query: 393 LQDFDSTGNIKLSFGKK 409
                  GN  +  GKK
Sbjct: 383 -----VKGNYVIQLGKK 394


>gi|257063568|ref|YP_003143240.1| tyrosyl-tRNA synthetase [Slackia heliotrinireducens DSM 20476]
 gi|256791221|gb|ACV21891.1| tyrosyl-tRNA synthetase [Slackia heliotrinireducens DSM 20476]
          Length = 405

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 108/415 (26%), Positives = 195/415 (46%), Gaps = 37/415 (8%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
            KS   +++ E   + ++   + L+I          +G D TA  +H GH   L  L   
Sbjct: 13  IKSGIDAVIPEDALLEKLKRGKPLNI---------KLGVDPTAPDIHLGHAVPLRKLRQF 63

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q  GH+   ++G GT++IGDPS R+ +R  +  +++  N +    +  +F      KT+ 
Sbjct: 64  QDLGHRVTLIIGDGTALIGDPSGRNSTRPQLTKEQVAANAQTY--VDQAFKILDPEKTE- 120

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            + +N  W+  +    LL  + S F+V R+L  +    R      ++  EF Y ++QAYD
Sbjct: 121 -LKHNADWILDLDMAKLLSLL-SNFTVARILERDDFHKRYTGGLPIALHEFLYPVMQAYD 178

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLS 242
            V +    +  +++GGSDQ  N++ G +L E+L      ALT PLL    G  KM K+  
Sbjct: 179 SVVI----NADVEIGGSDQLFNLLAGRELMEKLGMEPQVALTLPLLEGTDGVRKMSKSYG 234

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM-AKLQGKEI--NEAK 299
             I L  E   P + +    +I D  ++ + +  +T+ +++ID + A L   E+  N+ K
Sbjct: 235 NYIGLTDE---PNDMFGKIMSIPDELMIKYYRLASTVEVAQIDEIEAGLANDELHPNKVK 291

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMP-TISISKDEVSRG----MGLLT 354
           + +A  I    +     E AA AA   FD+       P    + + +++ G    +    
Sbjct: 292 RALARNIVEAYYD----EAAAQAAESDFDLKFKEHGFPEDAPVVEADLTPGEDGTVYFAK 347

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
           +IV+A  A S +EARR +    +K+N + +  +   +  +   +  + ++  GKK
Sbjct: 348 IIVEAKAAQSVSEARRLIDGGGVKVNGTALPAKSYYVTPE---TVAHAQVQVGKK 399


>gi|217967872|ref|YP_002353378.1| tyrosyl-tRNA synthetase [Dictyoglomus turgidum DSM 6724]
 gi|217336971|gb|ACK42764.1| tyrosyl-tRNA synthetase [Dictyoglomus turgidum DSM 6724]
          Length = 404

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 105/399 (26%), Positives = 187/399 (46%), Gaps = 39/399 (9%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
            KS+ + I+ E G   ++   RE         +   +G D +A  LH GH   L  L   
Sbjct: 13  LKSNVVEIIPEDGLYEKLKKARE-----EGRPLRVKLGADPSAPDLHLGHAVVLRKLKQF 67

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI-------QENIEKIKGIFSSFIKY 116
           Q  GH+ + ++G  T+ IGDPS R E+R+ +   ++       QE + KI  +  + I+Y
Sbjct: 68  QDLGHQVVFIIGDFTARIGDPSGRSETRKPLTPDQVKRNALTYQEQVGKILDVTKAEIRY 127

Query: 117 GTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNY 176
                       E W   +K  D+L  + S +++ RML  +    R K ++ +   E  Y
Sbjct: 128 -----------QEEWFGKMKLEDVLV-LTSKYTIARMLERDDFAQRFKEQKPIFIHEIMY 175

Query: 177 MILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-T 235
            +LQAYD V +  +    +++GG+DQ  N+I G ++          A+  P+L    G  
Sbjct: 176 PLLQAYDSVAIKAD----IELGGTDQKFNLIVGREIQREYGLEPQVAMLMPILEGLDGKQ 231

Query: 236 KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK-LQGKE 294
           KM K+L   I L +    P   +    +I D  ++ + +  T L   EI ++ + ++  +
Sbjct: 232 KMSKSLGNYIGLTE---PPNEMYGKVMSIPDELIIRYYELATELTKEEIRKIEQEMKEGK 288

Query: 295 IN--EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGL 352
           +N  +AK  +A EI  + HG E + KA       F      +++P + IS+ ++     +
Sbjct: 289 LNPRDAKARLAREIVKIYHGEEASLKAEEEFNRIFRNKELPENVPEVEISEPKI----WV 344

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
           + L+ + G A S +EA+R +   A++I+ + I +  L I
Sbjct: 345 VKLLTQVGAAKSNSEAKRLISQGAVEIDGTRIEDINLDI 383


>gi|251771280|gb|EES51861.1| tyrosyl-tRNA synthetase [Leptospirillum ferrodiazotrophum]
          Length = 396

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/348 (28%), Positives = 171/348 (49%), Gaps = 24/348 (6%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   L+ L   Q  GH+ + L+G  T +IGDP+ R E R+ +  +EI+
Sbjct: 44  GFDPTAPDLHIGHAVLLLKLREFQDLGHQVLFLIGDFTGMIGDPTGRSEIRKPLSPEEIR 103

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           +N       +++ +     +    ++ N  W+  +    ++R + +  +V   L  +  +
Sbjct: 104 QN----AATYAAQVDRILDRERTEVVYNSRWMAELGTEGMIR-LAARQTVAHFLDRDDFK 158

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R+++   +   E  Y ++Q YD V L  +    +++GG+DQ  N++ G DL        
Sbjct: 159 QRMEKNLPIHLHELLYPLIQGYDSVALRAD----VELGGTDQLFNLLVGRDLQRSYGQEP 214

Query: 221 LFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTL 279
              L+ PLL    G  KM K+L  A+ L   +  P   +    +I D+   S+A  LT L
Sbjct: 215 QVVLSLPLLVGTDGEKKMSKSLKNAVGL---LDPPGEMFGKLMSIPDSATASYALLLTRL 271

Query: 280 PMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPT- 338
             SEI   A L  +   EAK  +A  IT   HG    E+AA +A E FD     + +P+ 
Sbjct: 272 SESEI---ANLHPR---EAKATVAQAITARFHG----EEAARSAREEFDRQFSRRELPSE 321

Query: 339 ISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISN 386
           I+    E    + L T++V++G A S + A++ ++  A+ ++ S +S+
Sbjct: 322 IAGFVVEGPSPVRLSTVMVRSGAARSESLAKQLIRQGAVDLDGSPVSD 369


>gi|118474811|ref|YP_892369.1| tyrosyl-tRNA synthetase [Campylobacter fetus subsp. fetus 82-40]
 gi|118414037|gb|ABK82457.1| tyrosyl-tRNA synthetase [Campylobacter fetus subsp. fetus 82-40]
          Length = 402

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 116/390 (29%), Positives = 179/390 (45%), Gaps = 55/390 (14%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   L  +  LQK G     L+G  T+ IGDPS +  +R+++    I 
Sbjct: 43  GFDPTAPDLHLGHTVVLNKMRLLQKHGGIVQFLIGDFTAKIGDPSGKSATRKVLDDDTIA 102

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           +N +  K     F      KT+ +   N  WL  +   D L  + S F+V RML  +   
Sbjct: 103 KNAKTYKE--QVFKILDESKTEVMF--NSAWLSKLG-ADGLIALASTFNVARMLERDDFT 157

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R K E  ++  EF Y +LQ YD V +     C ++MGG+DQ  N++ G  LG      K
Sbjct: 158 KRYKNETPIAISEFLYPLLQGYDSVAMK----CDIEMGGTDQKFNLLMGRTLGRTYGIGK 213

Query: 221 LFALT-SPLLTTASGT-KMGKTLSGAIWLNKEMTSPYN---------FWQYWRNIDDA-- 267
             A+   PLL    G  KM K+L   I + +     +           W ++  + D   
Sbjct: 214 EQAIIMMPLLVGLDGVNKMSKSLGNYIGVTESANDIFAKTLSISDDLMWVWYELLSDKSS 273

Query: 268 -DVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMEC 326
            D+++    +++         AKL  K++ E    +A EIT+  HG  E    A AA + 
Sbjct: 274 DDILNLKADVSS---------AKLHPKKVKEN---LALEITSRFHGISE----AGAAKDE 317

Query: 327 FDMSIHSQH-----MPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINN 381
           FD  +HS+      MP   I KDE+     ++  +      +S  EARRH+K+NA+ +N 
Sbjct: 318 FD-RVHSKKELPSDMPEFEIVKDEI----WIVEALSNCALCSSNAEARRHIKANAVSVNQ 372

Query: 382 SIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
             + +E+L++      + G   L  GKK +
Sbjct: 373 QKVIDEQLKL------AKGEYILQVGKKTY 396


>gi|94986467|ref|YP_594400.1| tyrosyl-tRNA synthetase [Lawsonia intracellularis PHE/MN1-00]
 gi|94730716|emb|CAJ54078.1| Tyrosyl-tRNA synthetase [Lawsonia intracellularis PHE/MN1-00]
          Length = 398

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 102/393 (25%), Positives = 182/393 (46%), Gaps = 27/393 (6%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG++  I+       L ++  +    G+D TA  LH GH   +  L   Q+ GH   
Sbjct: 10  LIKRGYVELINEESLRKKLSNEKPLVVKAGFDPTAPDLHLGHTVLIHKLRHFQQLGHNVT 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKG-IFSSFIKYGTGKTDALMLNNET 130
            L+G  T +IGDPS R  +R  +  +++Q N E  K  IF       T      ++ N  
Sbjct: 70  FLIGDFTGLIGDPSGRSTTRPALTVEQVQANAETYKKQIFKILDPLKTN-----VVFNSK 124

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           WL S+  +D +R + S +++ RML  +   +R K    ++  E  Y ++Q YD V L  +
Sbjct: 125 WLMSMSSVDFIR-LASHYTLARMLERDDFSNRYKENTPIALHELLYPLMQGYDSVALKSD 183

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNK 249
               +++GG+DQ  N++ G  L           LT PLL    G  KM K+    + +++
Sbjct: 184 ----IELGGTDQKFNLLVGRTLMSHYNIEPQCILTMPLLEGLDGVRKMSKSYGNYVGIDE 239

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK------LQGKEINEAKKIIA 303
           +   PY  +    +I D  +  + + ++T  +SE++++ +      L  K++ E    +A
Sbjct: 240 Q---PYVQFSKVMSISDELMWRYYELISTSSLSEVEKLKQNVKEGHLHPKKVKEQ---LA 293

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
            +I T  HG+E+A +A       F         P    +  E S+    LT    +   T
Sbjct: 294 VDIVTQYHGKEKAYEALQEFTAVFVNGALPDDTPEFICNYGETSKPPAFLT---DSKLCT 350

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
           S +EA+R +K  ++ +N+    + +L ++  D+
Sbjct: 351 SRSEAKRLIKQGSLTVNDKRYHDVELPLEPGDY 383


>gi|73748441|ref|YP_307680.1| tyrosyl-tRNA synthetase [Dehalococcoides sp. CBDB1]
 gi|147669221|ref|YP_001214039.1| tyrosyl-tRNA synthetase [Dehalococcoides sp. BAV1]
 gi|115305804|sp|Q3ZX03|SYY_DEHSC RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|73660157|emb|CAI82764.1| tyrosyl-tRNA synthetase [Dehalococcoides sp. CBDB1]
 gi|146270169|gb|ABQ17161.1| tyrosyl-tRNA synthetase [Dehalococcoides sp. BAV1]
          Length = 396

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 100/369 (27%), Positives = 180/369 (48%), Gaps = 19/369 (5%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D ++  +H GH+  L  L  LQ  GH+ + ++G  T+ IGDPS    +R M+ +++++
Sbjct: 40  GFDPSSPDIHLGHMVALRKLRQLQDLGHQVVLIVGDWTAQIGDPSGASVTRPMLSAEQVK 99

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
            N    K     F K        +   +E W  + K  D++R + S F+V +ML+ +   
Sbjct: 100 AN---AKTYLEQFFKIVDKDKTEVRWQSE-WYGNFKLEDVVR-LSSKFTVAQMLARDDFA 154

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R    + +S  E  Y +LQAYD V +  +    ++ GG+DQ  N++ G +L E +    
Sbjct: 155 KRYAAGKPISVTELLYPMLQAYDSVMVKSD----VEFGGTDQKFNLLVGRELQEMVGQKP 210

Query: 221 LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTL 279
              L  P+L    G  KM K+L   I + ++   P   +    +I D  ++ + + +T +
Sbjct: 211 QQVLMVPILVGTDGVHKMSKSLGNYIGVAED---PSEIFGKCMSIPDELILQYFELVTDI 267

Query: 280 PMSEI-DRMAKLQGKEINEA--KKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM 336
           P  EI D  A+++  ++N    KK +A+E+ T ++    A++A              + M
Sbjct: 268 PDQEIADFKAQMENGQVNPMILKKRLASELLTQLYNATAAQEADARFTRVVQRGEIPEDM 327

Query: 337 PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
           P   +   E  +  G++  I+ +G A S +EARR L+  A++IN+  IS++   +K  D 
Sbjct: 328 PECRL---ENGQNTGVIDFIILSGLAKSKSEARRLLEQGAVEINSEKISDQNTPVKCGDI 384

Query: 397 DSTGNIKLS 405
              G  + S
Sbjct: 385 IKAGKRRYS 393


>gi|145637486|ref|ZP_01793144.1| ribose-phosphate pyrophosphokinase [Haemophilus influenzae PittHH]
 gi|145269292|gb|EDK09237.1| ribose-phosphate pyrophosphokinase [Haemophilus influenzae PittHH]
          Length = 395

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 107/381 (28%), Positives = 176/381 (46%), Gaps = 29/381 (7%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           ILSE   I ++   R L +          +G D TA  +H GH   L  L   Q+ GH+ 
Sbjct: 18  ILSEADLIEKLKENRPLKV---------KLGADPTAPDIHLGHTVVLNKLRQFQQLGHEV 68

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
             L+G  T ++GDPS ++ +R  +  +++  N E  K       K    +   ++ N+E 
Sbjct: 69  YFLIGDFTGMVGDPSGKNATRPPLSREDVLRNAETYK---EQIYKILDPQKTKIVFNSE- 124

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           WL  +    ++R + S ++V RML  +  + R    Q ++  EF Y +LQ YD V L   
Sbjct: 125 WLSKLGTEGMIR-LASNYTVARMLERDDFKKRFGNNQPIAIHEFIYPLLQGYDSVAL--- 180

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNK 249
            D  +++GG+DQ  N++ G +L +        A+T PLL    G  KM K+L   I + +
Sbjct: 181 -DADVELGGTDQKFNLLVGRELQKSAGKKPQVAITLPLLVGLDGEKKMSKSLGNYIGVTE 239

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATEIT 307
              +P + +    +I D  +  +   L+  P++EI ++      GK   + K ++A E+ 
Sbjct: 240 ---APSDMFGKVMSISDELMWDWYNLLSFRPLNEIAQLKSEVENGKNPRDVKILLAKELI 296

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
              H  E A  A    +  F        MP  + S +     +GL TL+ +AG   ST+E
Sbjct: 297 ARFHNEEAANAAEQEFINRFQKGAMPDEMPEFTFSGE-----IGLATLLKEAGLVPSTSE 351

Query: 368 ARRHLKSNAIKINNSIISNEK 388
           A R  +   +KIN   + N K
Sbjct: 352 AIRSAQQGGVKINGEKVDNVK 372


>gi|324515432|gb|ADY46199.1| Tyrosyl-tRNA synthetase [Ascaris suum]
          Length = 320

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 72/219 (32%), Positives = 126/219 (57%), Gaps = 9/219 (4%)

Query: 120 KTDAL-MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMI 178
           KT+ + +++N  W   +  +  +R I   F V  ML   +++SR++    L   EF Y I
Sbjct: 32  KTEPMEIIDNTEWHSRMTSLQFVR-ICRLFRVGDMLRLGAIKSRMRENHGLPCSEFLYQI 90

Query: 179 LQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFA-LTSPLLTTASGTKM 237
           +Q+YD+ +L++ YDC  Q+GGSDQ G++  G D   RL+T +  A +  PL+T ASG K+
Sbjct: 91  MQSYDWYQLSQKYDCYFQIGGSDQLGHLDAGYDY-IRLRTGRFSAGICLPLITDASGRKL 149

Query: 238 GKTLSGA---IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE 294
           GK+++     IWL++  TSPY F+Q++R   D ++V   +  +  P+SE++ +       
Sbjct: 150 GKSVASPKENIWLSEAKTSPYAFYQFFRQQPDKEIVPLIRYFSLRPLSEVEEILSEHNAN 209

Query: 295 INE--AKKIIATEITTMVHGREEAEKAATAAMECFDMSI 331
           + +  A++ +A E+T +VHGR+  + A   +   F  S+
Sbjct: 210 LGKWVAQEQLAQEMTRLVHGRKGLDLAQQCSRALFKGSL 248


>gi|121997667|ref|YP_001002454.1| tyrosyl-tRNA synthetase [Halorhodospira halophila SL1]
 gi|121589072|gb|ABM61652.1| tyrosyl-tRNA synthetase [Halorhodospira halophila SL1]
          Length = 400

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 95/360 (26%), Positives = 183/360 (50%), Gaps = 25/360 (6%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   +  L   Q  GH+ + L+G  T+ IGDPS +  +R  +  +E++
Sbjct: 38  GFDPTAPDLHLGHTVLINKLRQFQDLGHEVLFLIGDFTATIGDPSGKSATRPALTPEEVR 97

Query: 101 ENI----EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSF 156
           +N     E+I  I          K   L+ N++ W+ +++  DL+ ++ S ++V RML  
Sbjct: 98  QNARTYEEQIYAILDP-------KRTRLVFNSD-WMGTMQAGDLI-QLASRYTVARMLER 148

Query: 157 ESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL 216
           +    R +   +++  EF Y ++Q YD V L    +  +++GG+DQ  N++ G +L  + 
Sbjct: 149 DDFHQRYQAGSAIAIHEFLYPLIQGYDSVAL----EADIELGGTDQRFNLLVGRELQRQF 204

Query: 217 KTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKR 275
                  LT PLL    G  KM K+L   + + +   S  + +    +I D  +  + + 
Sbjct: 205 GQKPQTVLTMPLLVGLDGHKKMSKSLGNYVGVKE---SAEDIYAKLMSISDDLMWRYFEL 261

Query: 276 LTTLPMSEIDRM-AKLQGKEIN--EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIH 332
           L+  P  E++ + A+++ + +N  +AK  +A E+     G  EA++A  A +  F     
Sbjct: 262 LSLRPWREVEALQARIRDEGMNPRDAKDALAYELAERFCGAVEAQRAREAFVARFRHGAV 321

Query: 333 SQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
            + +P ++++ DE   G+G+   + +AG   ST+E  R ++  A++++   I + K +++
Sbjct: 322 PEDVPQVTLTYDEQG-GVGIAAALKEAGLVGSTSEGLRMVRQGAVRVDGERIEDPKARLE 380


>gi|24214937|ref|NP_712418.1| tyrosyl-tRNA synthetase [Leptospira interrogans serovar Lai str.
           56601]
 gi|45657564|ref|YP_001650.1| tyrosyl-tRNA synthetase [Leptospira interrogans serovar Copenhageni
           str. Fiocruz L1-130]
 gi|81468629|sp|Q8F411|SYY_LEPIN RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|81568195|sp|Q72RP6|SYY_LEPIC RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|24195970|gb|AAN49436.1| tyrosyl-tRNA synthetase [Leptospira interrogans serovar Lai str.
           56601]
 gi|45600803|gb|AAS70287.1| tyrosyl tRNA synthetase [Leptospira interrogans serovar Copenhageni
           str. Fiocruz L1-130]
          Length = 405

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 105/390 (26%), Positives = 185/390 (47%), Gaps = 28/390 (7%)

Query: 15  RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLM 74
           RG +  IS       L  +  +    G+D TA  LH GH  QL  L   Q  GH+   L+
Sbjct: 12  RGTVDLISEEELKSKLQKKKTLKIKAGFDPTAPDLHLGHFVQLKKLKHFQDLGHEVSFLL 71

Query: 75  GGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKG-IFSSFIKYGTGKTDALMLNNETWLC 133
           G  T++IGDP+ + E+R+ +  +E+ EN +  +  +F       T      ++ N  W  
Sbjct: 72  GDFTAMIGDPTGKSETRKRLSREEVLENSKTYQNQVFKVLDPVKTK-----IVYNSNWCS 126

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDC 193
            + + D+L  + S ++V RML  +    R K  Q +S +EF Y ++Q YD V +    +C
Sbjct: 127 KMNFEDVLV-LSSKYNVARMLERDDFSKRYKAGQPISMIEFLYPLVQGYDSVAM----EC 181

Query: 194 RLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMT 252
            +++GG+DQ  N++ G DL           LT PLL    G+ KM K+L   + + +   
Sbjct: 182 DVELGGTDQKFNLLVGRDLQREYGKEAQCVLTLPLLVGLDGSKKMSKSLGNYVGITE--- 238

Query: 253 SPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID-RMAKLQGKEINEAKKIIATEITTMVH 311
           +P + +    +I D  + ++ + LT LP+ EI+ R   +  KE++   K I TE+  ++ 
Sbjct: 239 TPIDMFGKLMSISDDLMWNYFELLTDLPLPEIENRKNGMAKKELH--PKEIKTELAKLIM 296

Query: 312 GREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMG---------LLTLIVKAGFA 362
            +  +      A++ +   IH+     +     E+  G           L+ ++ K  F 
Sbjct: 297 DQFSSPSENEEAIQEWK-KIHNPKSRAVPDDVKEIKLGEEFFAETPEPLLVWVLSKLSFI 355

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIK 392
            S +E RR +K+  + ++   I++EK  I+
Sbjct: 356 PSVSEGRRLIKAGGLYLSEDKITDEKFPIQ 385


>gi|291276822|ref|YP_003516594.1| tyrosyl-tRNA synthetase [Helicobacter mustelae 12198]
 gi|290964016|emb|CBG39855.1| tyrosyl-tRNA synthetase [Helicobacter mustelae 12198]
          Length = 402

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 113/380 (29%), Positives = 180/380 (47%), Gaps = 34/380 (8%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   L  L   QK G     L+G  T+ IGDPS + E+R+ +  +E+ 
Sbjct: 44  GFDPTAPDLHLGHTVLLQKLATFQKFGGSVKFLIGDFTARIGDPSGKSETRKPLSPEEVL 103

Query: 101 ENIEKIK-GIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           +N    +  +F       T      +  N  WL  +    ++  + S FSV RML  +  
Sbjct: 104 QNARTYQEQVFKVLDPCFTE-----VCFNSKWLAELGAEGMIT-LTSHFSVARMLERDDF 157

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R K  Q +S +EF Y +LQ YD V L  +    +++GG+DQ  N++ G  L       
Sbjct: 158 EKRYKSNQPISMVEFMYPLLQGYDSVALESD----IELGGNDQKFNLLMGRSLQRAYGLK 213

Query: 220 KLFA-LTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT 277
           K  + +T PLL    G  KM K+L   I + ++  + Y       +I D  +  + + L+
Sbjct: 214 KEQSIMTVPLLEGLDGVQKMSKSLKNYIGVTEDSQTMYA---KIMSISDELMWKYYELLS 270

Query: 278 TLPMSEIDRMAKLQGKEI---NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQ 334
              + EI +M K    E+     AK+++A EITT  H +E A+ A     E FD      
Sbjct: 271 AKSLQEISQMQKNVESEVLHPKLAKELLALEITTRYHNQELAQDAK----EVFDNVFSKN 326

Query: 335 HMPTISISKDEVSRGMG--LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
           H+P      D +  G+G  +  ++V A    ST++ARR +++ AIKIN   +++E  +  
Sbjct: 327 HLPK---DMDTMEFGVGEWICKVLVDAKICPSTSQARREIRAGAIKINQQKLADENHKF- 382

Query: 393 LQDFDSTGNIKLSFGKKNHI 412
                + G+  +  GK+  I
Sbjct: 383 -----AQGDYIVQMGKRKFI 397


>gi|33151869|ref|NP_873222.1| tyrosyl-tRNA synthetase [Haemophilus ducreyi 35000HP]
 gi|81423698|sp|Q7VN81|SYY_HAEDU RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|33148090|gb|AAP95611.1| tyrosyl-tRNA synthetase [Haemophilus ducreyi 35000HP]
          Length = 396

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 108/390 (27%), Positives = 179/390 (45%), Gaps = 29/390 (7%)

Query: 10  SILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
           +I SE   I ++   R L I          +G D TA  +H GH   +  L   Q+ GH+
Sbjct: 18  NIYSEEDLIAKLKENRPLRI---------KLGADPTAPDIHLGHTVVINKLRQFQQLGHE 68

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
            I L+G  T ++GDPS ++ +R  +  +++  N E  K     F      KT  +   N 
Sbjct: 69  VIFLIGDFTGMVGDPSGKNTTRPPLTREDVLRNAETYKQQL--FKILDPNKTRVVF--NS 124

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
            WL  +    ++R + S ++V RML  +  + R    Q ++  EF Y +LQ YD V L  
Sbjct: 125 AWLNELGTEGMIR-LTSNYTVARMLERDDFKKRFTNNQPIAIHEFIYPLLQGYDSVALQA 183

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLN 248
           +    +++GG+DQ  N++ G +L +  +     A+T PLL    G  KM K+L   I + 
Sbjct: 184 D----VELGGTDQTFNLLVGRELQKSAEQKPQVAITLPLLVGLDGEKKMSKSLGNYIGVT 239

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATEI 306
           +   +P   +    +I D  +  +   L+  P++EI ++      GK   + K ++A EI
Sbjct: 240 E---APNEMFGKVMSISDELMWDWYNLLSFRPLAEITQLKADVDAGKNPRDVKILLAKEI 296

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
            T  H   EA+ A    +  F        MP    + +     +GL TL+ +AG   ST+
Sbjct: 297 ITRFHSEAEADLAEQHFINRFQKGAIPDEMPEFCFNGE-----IGLATLLKEAGLVASTS 351

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDF 396
           EA R  +   +KI+   I + +   +L  F
Sbjct: 352 EAIRSAQQGGVKIDGQKIDDVRANAQLGTF 381


>gi|301170369|emb|CBW29975.1| tyrosyl-tRNA synthetase [Haemophilus influenzae 10810]
          Length = 395

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 107/381 (28%), Positives = 176/381 (46%), Gaps = 29/381 (7%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           ILSE   I ++   R L +          +G D TA  +H GH   L  L   Q+ GH+ 
Sbjct: 18  ILSEADLIEKLKENRPLKV---------KLGADPTAPDIHLGHTVVLNKLRRFQQLGHEV 68

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
             L+G  T ++GDPS ++ +R  +  +++  N E  K       K    +   ++ N+E 
Sbjct: 69  YFLIGDFTGMVGDPSGKNATRPPLSREDVLRNAETYK---EQIYKILDPQKTKIVFNSE- 124

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           WL  +    ++R + S ++V RML  +  + R    Q ++  EF Y +LQ YD V L   
Sbjct: 125 WLSKLGTEGMIR-LASNYTVARMLERDDFKKRFGNNQPIAIHEFIYPLLQGYDSVAL--- 180

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNK 249
            D  +++GG+DQ  N++ G +L +        A+T PLL    G  KM K+L   I + +
Sbjct: 181 -DADVELGGTDQKFNLLVGRELQKSAGKKPQVAITLPLLVGLDGEKKMSKSLGNYIGVTE 239

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATEIT 307
              +P + +    +I D  +  +   L+  P++EI ++      GK   + K ++A E+ 
Sbjct: 240 ---APSDMFGKVMSISDELMWDWYNLLSFRPLNEIAQLKSEVENGKNPRDVKILLAKELI 296

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
              H  E A  A    +  F        MP  + S +     +GL TL+ +AG   ST+E
Sbjct: 297 ARFHNEEAANAAEQEFINRFQKGAMPDEMPEFTFSGE-----IGLATLLKEAGLVPSTSE 351

Query: 368 ARRHLKSNAIKINNSIISNEK 388
           A R  +   +KIN   + N K
Sbjct: 352 AIRSAQQGGVKINGEKVDNVK 372


>gi|310779543|ref|YP_003967876.1| tyrosyl-tRNA synthetase [Ilyobacter polytropus DSM 2926]
 gi|309748866|gb|ADO83528.1| tyrosyl-tRNA synthetase [Ilyobacter polytropus DSM 2926]
          Length = 405

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 104/364 (28%), Positives = 180/364 (49%), Gaps = 27/364 (7%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D T S LH GH   L  L   Q  GH+   L+G  T+ IGDP+ + E+R+M+ S++I
Sbjct: 45  LGIDPTGSDLHIGHAVPLRKLRQFQDLGHRVKFLIGTFTARIGDPTGKSETRKMLSSEDI 104

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           Q NIE     +   +K         ++ N  WL  +   D+L+ + S F+V +M+  E  
Sbjct: 105 QRNIE----TYLEQVKLILDLEKTEVVYNGDWLEKLSLEDVLK-LLSQFTVAQMVQREDF 159

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             RL   + +S +EF Y ILQ YD V +    +  +++G ++Q  NI+ G DL +     
Sbjct: 160 SKRLSEGKPVSLVEFMYPILQGYDSVAI----EADVELGATEQKFNILRGRDLQKNAGQQ 215

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
           +   +  P+L    G  KM K+L   I + +   +P + +    +I D  + ++ +  T 
Sbjct: 216 QQVCMMMPILVGLDGVEKMSKSLGNYIGVTE---APNDMFGKVMSISDDLMWNYYEVATD 272

Query: 279 LPMSEIDRMAK-LQGKEIN--EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQH 335
           + + EI  + + +    I+  + KK +  EI  + H    +E+A   A E F+    +++
Sbjct: 273 VALEEIKSLKEGVANGTIHPMDCKKRLGEEIVKIYH----SEEAGKQAREWFENVFSNKN 328

Query: 336 M----PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
           M    P + I  DE++    +  L+ +  F  ST+EARR +     KIN+  + + K  I
Sbjct: 329 MAVDLPEVKIEADEIN---AIDLLVKELMFLKSTSEARRLISQGGFKINDEAVKDLKAVI 385

Query: 392 KLQD 395
           K++D
Sbjct: 386 KIED 389


>gi|67919996|ref|ZP_00513516.1| Tyrosyl-tRNA synthetase, class Ib [Crocosphaera watsonii WH 8501]
 gi|67857480|gb|EAM52719.1| Tyrosyl-tRNA synthetase, class Ib [Crocosphaera watsonii WH 8501]
          Length = 409

 Score =  127 bits (320), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 97/376 (25%), Positives = 177/376 (47%), Gaps = 23/376 (6%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D T + +H GH      L   Q  GH  + ++G  T+ IGDP+ + E R+ + S+ +
Sbjct: 49  LGIDPTGTDIHLGHSIPFRKLRGFQDAGHTAVVIIGDFTAQIGDPTGKSEVRKQLTSEAV 108

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           ++N E         + + T     +  N+E WL  +  +  ++E+ +  +V +ML+ E  
Sbjct: 109 RKNAESYLEQLRPILDFETPGRLEIRYNSE-WLSELN-LAKIQELLATMTVGQMLAKEGF 166

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R K+E  +   EF Y ++Q YD V +    D  +++GG+DQ  NI  G DL       
Sbjct: 167 AERYKQENPIFLHEFLYPLMQGYDSVMI----DADVELGGTDQKFNIAVGRDLQRHFGKK 222

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
             F L  P+L    G+ KM K+L+  + L ++  S Y+  +      DA +  + + LT 
Sbjct: 223 PQFGLLLPILRGTDGSQKMSKSLNNYVGLKEDELSMYSKLE---KTPDAIIKEYFELLTN 279

Query: 279 LPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDM--SIHSQHM 336
           LP+ E+    +       E++K++A EI +  HG++ A  A   A +      +  +  +
Sbjct: 280 LPLEELPENPR-------ESQKLLALEIVSQFHGKQAAVTAQKTAEDLVKNKGTGATDAV 332

Query: 337 PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
           P   +SK E      L  ++  +G   S+ + RR ++  A++++   I++  + I  +  
Sbjct: 333 PEYDLSKVEFP--AKLFYILSASGLCGSSGDGRRQIQGGAVRLDGEKITD--VNITFEQS 388

Query: 397 DSTGNIKLSFGKKNHI 412
           +      L  GKK  I
Sbjct: 389 EQLSGKVLQVGKKKFI 404


>gi|163781672|ref|ZP_02176672.1| tyrosyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
 gi|159882892|gb|EDP76396.1| tyrosyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
          Length = 399

 Score =  127 bits (320), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 105/371 (28%), Positives = 171/371 (46%), Gaps = 24/371 (6%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH+  L  L   Q+ GH+   ++G  T++IGDP+ R E+R  +  +++ 
Sbjct: 45  GFDPTAPDLHLGHVVLLQKLRQFQQLGHEVYFIIGDFTAMIGDPTGRSETRPPLTKEQVL 104

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           EN +  +     F      KT  +   N TWL  +    L++ + + ++V RML  +   
Sbjct: 105 ENAKTYE--HQVFKVLDPEKTTIVF--NSTWLQELGTEGLIK-LSAKYTVARMLERDDFS 159

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R K    +   EF Y +LQAYD V +  +    +++GG+DQ  N++ G D+        
Sbjct: 160 KRFKEGIPIYIHEFLYPLLQAYDSVAIKAD----VELGGTDQKFNLLIGRDIQREYGQEP 215

Query: 221 LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTL 279
              +T PLL    G  KM K+    + + ++   P   +    +I D  +  +   LT  
Sbjct: 216 QVCITMPLLVGLDGVRKMSKSYGNYVGITED---PKTMFGKLMSISDELMWDYYLLLTDY 272

Query: 280 PMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI 339
              EI++  K       EAKK +A  I +  H  EEA+KA       +      +  P +
Sbjct: 273 TEEEIEKFRKEW--HPMEAKKHLAELIVSRFHSEEEAKKAREWFESTYSKRKFPEDAPLV 330

Query: 340 SISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDST 399
            +  +E    M  L LI + G  +S NE RR ++   +K+N   +S+    IKL      
Sbjct: 331 ELPHEE----MTALDLITELGAVSSKNEGRRVIQGGGLKVNFEKVSDPYQSIKLD----- 381

Query: 400 GNIKLSFGKKN 410
           G +K+  GKK 
Sbjct: 382 GELKVQVGKKK 392


>gi|78186451|ref|YP_374494.1| tyrosyl-tRNA synthetase [Chlorobium luteolum DSM 273]
 gi|115305813|sp|Q3B5D0|SYY_PELLD RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|78166353|gb|ABB23451.1| tyrosyl-tRNA synthetase [Chlorobium luteolum DSM 273]
          Length = 405

 Score =  127 bits (320), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 110/377 (29%), Positives = 182/377 (48%), Gaps = 33/377 (8%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D +   LH GH   L  L   Q  GH+ I ++G  T++IGDPS + ++R  + ++E 
Sbjct: 44  LGADPSRPDLHLGHSVVLRKLREFQDLGHEAILIIGDFTAMIGDPSGKSKTRPQLSAEEA 103

Query: 100 QENIEKIKGIFSSFIKYGTGKTDA---LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSF 156
           +EN        +S+ +  +   D     +  N  WL ++ + D++R + S ++V RML  
Sbjct: 104 REN-------GASYFEQASKILDPHKTTICYNADWLGNMTFADVIR-LSSHYTVARMLER 155

Query: 157 ESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL 216
           +    R +  + +S  EF Y + QA D V L  +    +++GG+DQ  N++ G DL    
Sbjct: 156 DDFERRYRSSEPISIHEFLYPLAQAMDSVHLRND----VELGGTDQKFNLLVGRDLQREY 211

Query: 217 KTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKR 275
                  +T PLL    G  KM K+L  A+  N     P + +    +I D  + ++ + 
Sbjct: 212 GILPQVCITMPLLVGTGGEDKMSKSLGNAVCFND---LPSDMYGRVLSIPDTLIENWCRL 268

Query: 276 LTTLPMSEIDRMAKLQGKEINE--AKKIIATEITTMVHGREEAEKAATAAMECFD-MSIH 332
           L  LP++   R A L+G E +   AK+ +A EI    +   E    A AA E FD + +H
Sbjct: 269 L--LPLTGEGRRAILEGWEEDPRTAKRRLAREIVMQYYSAGE----AGAAEEHFDRLFVH 322

Query: 333 SQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
            Q    I +++      + L+ L+   G A S  +ARR ++ NA+ I+   I++ K  I 
Sbjct: 323 KQAPTEIELTRFSEPE-LPLVDLLTTLGAAASKTDARRMIQQNAVSIDEEKITDVKTIIT 381

Query: 393 LQDFDSTGNIKLSFGKK 409
           L D   T    L  GK+
Sbjct: 382 LSDEPKT----LKAGKR 394


>gi|171464163|ref|YP_001798276.1| tyrosyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           necessarius STIR1]
 gi|171193701|gb|ACB44662.1| tyrosyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           necessarius STIR1]
          Length = 410

 Score =  127 bits (320), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 110/384 (28%), Positives = 180/384 (46%), Gaps = 32/384 (8%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  L  LQ  GH  I L+G  TS+IGDPS R+ +R  + ++EI
Sbjct: 53  LGLDPTAPDIHLGHTVVLNKLRQLQDLGHTVIFLIGDFTSMIGDPSGRNATRPPLTAEEI 112

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
             N E      S  +     KT+  +  N  W C       + ++ + ++V +ML  +  
Sbjct: 113 AINAETYYRQASMVLD--PSKTE--VRYNSEW-CDPLGARGMIQLAARYTVAQMLERDDF 167

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R +    +S  EF Y ++Q YD V L  +    L++GG DQ  N + G +L       
Sbjct: 168 TKRYRSGVPISVHEFLYPLMQGYDSVALKSD----LELGGIDQKFNFLVGRELQREYGQE 223

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               LT PLL    G  KM K+    I +++        +    +I D  +  +   L+ 
Sbjct: 224 PQCILTMPLLVGLDGVDKMSKSKGNYIGISEPAG---EMFGKLLSISDDLMWDYFTLLSF 280

Query: 279 LPMSEIDRMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIH---S 333
            PM+EID M +    G+   + K ++A EI    H +  AEK    A+E F+        
Sbjct: 281 RPMAEIDLMKQEVAAGRNPKDCKVLLAQEIVARFHSQAAAEK----ALEDFNHRAKGGIP 336

Query: 334 QHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL 393
             +P +++S       MG+  L+  AG A ST+EA R+++ N +KI+ + I++++L+++ 
Sbjct: 337 DDIPEVNLS----GAPMGIANLLKAAGLAPSTSEANRNIEQNGVKIDGTTIADKQLKVE- 391

Query: 394 QDFDSTGNIKLSFGKKNHIICHLC 417
                 GN  +  GK+  +   L 
Sbjct: 392 -----AGNYVVQVGKRKFVKVTLA 410


>gi|52425287|ref|YP_088424.1| tyrosyl-tRNA synthetase [Mannheimia succiniciproducens MBEL55E]
 gi|81387049|sp|Q65T71|SYY_MANSM RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|52307339|gb|AAU37839.1| TyrS protein [Mannheimia succiniciproducens MBEL55E]
          Length = 395

 Score =  127 bits (320), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 100/385 (25%), Positives = 177/385 (45%), Gaps = 29/385 (7%)

Query: 10  SILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
            +LSE   I ++   R L I          +G D TA  +H GH   L  L   Q  GH+
Sbjct: 17  EVLSEADLIEKLKENRPLKI---------KLGADPTAPDIHLGHTVVLNKLRQFQNFGHE 67

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
            I L+G  T ++GDPS ++++R  +  +++  N E  K      +     +    ++ N 
Sbjct: 68  VIFLIGDFTGMVGDPSGKNKTRPPLSREDVLRNAETYKQQIYKILDPQKTR----IVFNS 123

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
            WL  +    ++R + S ++V RML  +  + R   +Q ++  EF Y +LQ +D V L  
Sbjct: 124 DWLGKLGTEGMIR-LASNYTVARMLERDDFKKRFTEKQPIAIHEFIYPLLQGHDSVAL-- 180

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLN 248
             +  +++GG+DQ  N++ G +L +        A+T PLL    G  KM K+L   I + 
Sbjct: 181 --EADVELGGTDQKFNLLVGRELQKSAGQKPQVAMTLPLLVGLDGEKKMSKSLGNYIGVT 238

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATEI 306
               +P + +    +I D  +  +   L+  P++EI +  +    G+   + K ++A EI
Sbjct: 239 ---DAPNDMFGKIMSISDDLMWDWYDLLSFRPLTEIAQFKEEVKNGRNPRDVKILLAKEI 295

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
               H   +A+ A    +  F        MP  +   +     +GL  L+ +AG   ST+
Sbjct: 296 IARFHSEADADTAEQEFINRFQKGAMPDEMPEFTFEGE-----IGLANLLKEAGLVASTS 350

Query: 367 EARRHLKSNAIKINNSIISNEKLQI 391
           EA R ++ + +KI+   + + K  I
Sbjct: 351 EANRMVQQDGVKIDGEKVEDAKTTI 375


>gi|118581710|ref|YP_902960.1| tyrosyl-tRNA synthetase [Pelobacter propionicus DSM 2379]
 gi|118504420|gb|ABL00903.1| tyrosyl-tRNA synthetase [Pelobacter propionicus DSM 2379]
          Length = 404

 Score =  127 bits (320), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 107/376 (28%), Positives = 176/376 (46%), Gaps = 29/376 (7%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   +  L   Q+ GH+   L+G  T +IGDP+ + E+R+++  +++ 
Sbjct: 42  GFDPTAPDLHLGHTVLIHKLRQFQQLGHEVNFLIGDFTGMIGDPTGKSETRKVLTREDVL 101

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           +N E  K     F      KT  +   N +WL  +    L+  + S ++V RML  +   
Sbjct: 102 KNAETYKE--QVFKILDPDKTKVVF--NSSWLNDLGCGGLI-ALASKYTVARMLERDDFH 156

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R   +Q +S  EF Y ++Q YD V L  +    +++GG+DQ  N++ G +L        
Sbjct: 157 KRFSSQQPISIHEFLYPLVQGYDSVALKSD----VELGGTDQKFNLLVGRELQREWGQEP 212

Query: 221 LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTL 279
              LT PLL    G  KM K+L   I +N+        +    +I D  +V + + L+ +
Sbjct: 213 QCVLTMPLLEGLDGVNKMSKSLGNYIGINEPGDE---IFGKVMSISDELMVRYYELLSDM 269

Query: 280 PMSEIDRMAKLQGKEIN-----EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQ 334
           P+ E++++   QG   N     E KK +  E+    HG   A  A    ++ F  +    
Sbjct: 270 PLPELEKLK--QGLADNSLHPMETKKALGRELVGRFHGAAAARDAEENFVKRFRDNQIPD 327

Query: 335 HMPTISISKDEVSRGMGLLT-LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL 393
            MP IS     ++ G  LL   + +AG   S  EARR +    +K+N   ISN  L++  
Sbjct: 328 DMPQISHC---LADGTLLLARAMSEAGLTKSNGEARRSIDQGGVKLNGEKISNPNLEL-- 382

Query: 394 QDFDSTGNIKLSFGKK 409
              D+ G   +  G++
Sbjct: 383 ---DAAGEYIVQIGRR 395


>gi|134299504|ref|YP_001113000.1| tyrosyl-tRNA synthetase [Desulfotomaculum reducens MI-1]
 gi|134052204|gb|ABO50175.1| tyrosyl-tRNA synthetase [Desulfotomaculum reducens MI-1]
          Length = 407

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 96/361 (26%), Positives = 170/361 (47%), Gaps = 17/361 (4%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D +A  +H GH   L  L   Q+ GH    ++G  T  IGDP+ +  +R+ +  +E+
Sbjct: 42  LGLDPSAPDIHLGHTVVLQKLRQFQELGHNITIILGDFTGRIGDPTGKSVARKPLTEEEV 101

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
             N    +      +     K       N TWL  +K+ D+++ + +  +V RML  E  
Sbjct: 102 LANARTYEQQIFKILDPEKTKVHF----NSTWLAPLKFEDVIK-LAATTTVARMLEREDF 156

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R++    +S  EF Y ++Q YD V L    +  ++MGG+DQ  N++ G  L +     
Sbjct: 157 TKRMRENLPISIHEFFYPLMQGYDSVAL----EADIEMGGTDQKFNLLMGRTLQKEFGQE 212

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
              A+  P+L    G  KM K+L   I +++    P   +    ++ D  +V + + +T 
Sbjct: 213 PQVAIMMPILEGLDGVNKMSKSLGNYIGIDE---PPQEMYGKTMSLPDELMVRYFELVTP 269

Query: 279 LPMSEIDRMAK-LQGKEIN--EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQH 335
           +P+ E+  +AK L+   ++  + K  +  EI T  HG E A +A       F        
Sbjct: 270 VPLEEVKAIAKGLEDGSLHPRDVKMRLGREIVTFYHGPEAALQAEDHFKTVFQKGEIPDE 329

Query: 336 MPTISISKDEVSRGM-GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
           +    +S D +  G+  L  L+ +A  A + +EARR +K  A+KIN    ++  +++K Q
Sbjct: 330 IDEFLVSGDLLEEGLVALPKLLTQAKLAGTNSEARRLIKEGAVKINGEKATDPNMRLKPQ 389

Query: 395 D 395
           +
Sbjct: 390 E 390


>gi|300856593|ref|YP_003781577.1| tyrosyl-tRNA synthetase [Clostridium ljungdahlii DSM 13528]
 gi|300436708|gb|ADK16475.1| tyrosyl-tRNA synthetase [Clostridium ljungdahlii DSM 13528]
          Length = 407

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 105/370 (28%), Positives = 178/370 (48%), Gaps = 21/370 (5%)

Query: 25  RELDILCSQGV-VTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGD 83
           R+L+   S G+ +   +G D +A  +H GH   L  +  +Q  GH+ + ++G  T  IGD
Sbjct: 26  RKLEKSVSSGIPLRIKLGLDPSAPDIHLGHAVVLRKIKQMQDLGHQAVIIIGDFTGKIGD 85

Query: 84  PSFRDESRRMMRSQEIQENIEKI-KGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLR 142
           PS + ++RR + ++++ EN     K +F    +    KT+     N  WL  + + D+L+
Sbjct: 86  PSGKSKTRRQLTTEQVIENARTYEKQVFKILDR---DKTEVRF--NSEWLSKLNFEDVLK 140

Query: 143 EIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQ 202
             G   +V R+L  +    R K  + +   EF Y ++QAYD V +  +    ++MGG+DQ
Sbjct: 141 LAGK-VTVARILERDDFEKRYKNNKPIGLHEFFYPLMQAYDSVAVKAD----IEMGGTDQ 195

Query: 203 WGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYW 261
             N++ G  L          AL  PLL    G  KM K+L   I + ++  S Y   Q  
Sbjct: 196 TFNVLMGRTLQGDYSQESQIALFMPLLEGTDGVEKMSKSLGNYIGICEDAISIY---QKI 252

Query: 262 RNIDDADVVSFAKRLTTLPMSEIDRMA-KLQGKEIN--EAKKIIATEITTMVHGREEAEK 318
             I D  ++ + +  T +   E++ +  KL   E N  + K  +A EITT+  G  EAE 
Sbjct: 253 MTIPDNLIIKYFELATDIHPDEVEAIKLKLNNTETNPRDIKMQLAKEITTLYCGVSEAES 312

Query: 319 AATAAMECFDMSIHSQHMPTISISKDEVSRG--MGLLTLIVKAGFATSTNEARRHLKSNA 376
           A       F  ++    +    +S+D  +    + L+ +I  +G A S +EA+R +  NA
Sbjct: 313 AEEHFKTVFQKNLIPNDIDEFILSQDCFASNDEVNLVKIITGSGIAASNSEAKRLIDQNA 372

Query: 377 IKINNSIISN 386
           ++IN    +N
Sbjct: 373 VRINGKKYNN 382


>gi|303230712|ref|ZP_07317459.1| tyrosine--tRNA ligase [Veillonella atypica ACS-049-V-Sch6]
 gi|302514472|gb|EFL56467.1| tyrosine--tRNA ligase [Veillonella atypica ACS-049-V-Sch6]
          Length = 402

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/355 (27%), Positives = 168/355 (47%), Gaps = 20/355 (5%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  L   Q+ GH+ + ++GG T+ IGDP+ +  +R  +  +E+
Sbjct: 42  LGLDPTAPDIHLGHTVPLRKLRLFQEFGHQVVIVIGGFTARIGDPTGKSVTRPPLTKEEV 101

Query: 100 QENIEKIK-GIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
            +N E  K  IF       T     ++ +N  WL S+ + D+LR + S ++V RM+  + 
Sbjct: 102 LKNAETYKTQIFKVLDPEKT-----IVRDNSEWLESMNFADVLR-LASSYTVARMMERDD 155

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
              R K  + +   EF Y ++Q  D V L  +    ++ GG+DQ  N++ G  L E    
Sbjct: 156 FDKRYKEGRPIGVHEFMYPLMQGQDSVALHAD----VEFGGTDQTFNLLMGRHLQELAGQ 211

Query: 219 PKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT 277
                +T PLL    G  KM K+L   I +++   +P + +    +I D  ++ +   +T
Sbjct: 212 EPQVVITMPLLEGLDGVQKMSKSLGNYIGIDE---APKDMYGKAMSIPDELMMRYFMLVT 268

Query: 278 TLPMSEIDRM-AKLQGKEIN--EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQ 334
            + + + D M  +L+   ++  +AK  +A  I  + HG + A++A       F       
Sbjct: 269 DMSIEDQDDMEERLENGTLHPRDAKMQLAKTIVRLYHGEQAAQEAEDEFKRVFQQHALPT 328

Query: 335 HMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKL 389
            +P  +I  D+ S  + +      AG   S  EARR +K+ A K+N      E L
Sbjct: 329 DIPEYAI--DKPSEAIFVPQFCTDAGLTASNGEARRSIKAGAFKVNGEKYGEENL 381


>gi|145590060|ref|YP_001156657.1| tyrosyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
 gi|145048466|gb|ABP35093.1| tyrosyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
          Length = 410

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 113/377 (29%), Positives = 185/377 (49%), Gaps = 34/377 (9%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  L  LQ  GH  I L+G  TS+IGDPS R+ +R  + ++EI
Sbjct: 53  LGLDPTAPDIHLGHTVVLNKLRQLQDLGHTVIFLIGDFTSMIGDPSGRNATRPPLTAEEI 112

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
             N E      S  +     KT+  +  N  W   +    ++ ++ +  +V RML  +  
Sbjct: 113 AVNAETYYRQASMVLD--PSKTE--VRYNSEWSDPLGARGMI-QLAAKHTVARMLERDDF 167

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLG-ERLKT 218
             R +    +S  EF Y ++Q YD V L  +    L++GG+DQ  N++ G +L  E  + 
Sbjct: 168 TKRYRSGVPISIHEFLYPLMQGYDSVALKSD----LELGGTDQKFNLLVGRELQREHGQE 223

Query: 219 PKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT 277
           P+   LT PLL    G  KM K+    I +++      + +    +I D  +  +   L+
Sbjct: 224 PQCI-LTMPLLVGLDGVEKMSKSKGNYIGISEPAG---DMFGKLLSISDDLMWDYFTLLS 279

Query: 278 TLPMSEIDRMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIH--- 332
             PMSEID M +    G+   + K ++A EI    H +  AEK    A+E F+       
Sbjct: 280 FRPMSEIDLMKQEVAAGRNPKDCKVLLAQEIVARFHSQAAAEK----ALEDFNHRAKGGV 335

Query: 333 SQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
              +P +++S       MG+ +L+  AG A ST+EA R+++ N +KI+   I++++L+I+
Sbjct: 336 PDDIPEVNLS----GAPMGIASLLKAAGLAPSTSEAMRNIEQNGVKIDGVTIADKQLKIE 391

Query: 393 LQDFDSTGNIKLSFGKK 409
                 TG   +  GK+
Sbjct: 392 ------TGAYVVQVGKR 402


>gi|217033733|ref|ZP_03439159.1| hypothetical protein HP9810_7g14 [Helicobacter pylori 98-10]
 gi|216943782|gb|EEC23222.1| hypothetical protein HP9810_7g14 [Helicobacter pylori 98-10]
          Length = 402

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 106/377 (28%), Positives = 180/377 (47%), Gaps = 34/377 (9%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   +  L  LQ+ G +   L+G  T++IGDP+ ++E+R+ +  +++ 
Sbjct: 44  GFDPTAPDLHLGHTVLIQKLALLQQYGARVKFLIGDFTAMIGDPTGKNETRKPLNREQVL 103

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           EN +     +   I     +    +  N TWL ++    ++ E+ + FSV RML  +   
Sbjct: 104 ENAK----TYEEQIYKILDQKHTEVCFNSTWLDTLGTKGII-ELCAKFSVARMLERDDFT 158

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R K  + +S +EF Y +LQ YD V +    D  +++GG+DQ  N++ G  L       K
Sbjct: 159 KRYKENRPISIVEFLYPLLQGYDSVAM----DADIELGGNDQKFNLLVGRFLQRAYGLNK 214

Query: 221 LFA-LTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
             + +T PLL    G  KM K+L   + + +E   P   +    ++ D  +  +   L+T
Sbjct: 215 EQSIITMPLLEGLDGVQKMSKSLGNYVGITEE---PNAMFGKIMSVSDDLMWRYYTLLST 271

Query: 279 LPMSEIDRMAK------LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIH 332
             + EI+ +        L  K + E    +A EI    +  E+A KA     E F     
Sbjct: 272 KTLEEIEDLKHGILNQTLHPKAVKED---LAGEIVARYYDDEQAIKAK----EQFSKVFS 324

Query: 333 SQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
           +  +P I +  D    G+G+L ++ + GF  ST++ARR ++   +KIN  ++ NE  +  
Sbjct: 325 ANLLPEILLESD-FDEGVGILDVLKQIGFCPSTSQARRDIQGGGVKINQEVVKNESYRF- 382

Query: 393 LQDFDSTGNIKLSFGKK 409
                  GN  +  GKK
Sbjct: 383 -----VKGNYVIQLGKK 394


>gi|121534232|ref|ZP_01666057.1| tyrosyl-tRNA synthetase [Thermosinus carboxydivorans Nor1]
 gi|121307335|gb|EAX48252.1| tyrosyl-tRNA synthetase [Thermosinus carboxydivorans Nor1]
          Length = 405

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 107/371 (28%), Positives = 180/371 (48%), Gaps = 21/371 (5%)

Query: 31  CSQGV-VTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDE 89
            S GV +   +G D TA  +H GH   L  L   Q  GH  I ++G  T  IGDP+ + E
Sbjct: 32  VSTGVPLRVKLGLDPTAPDIHLGHTVVLRKLKQFQDLGHHIIIIIGDFTGRIGDPTGKSE 91

Query: 90  SRRMMRSQEIQENIEKI-KGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFF 148
           +R+ +  +EI+ N     + IF    K    KT+ +   N +WL  + + D+++ + + +
Sbjct: 92  TRKQLTEEEIRINARTYEEQIFRILDKE---KTEVVF--NSSWLAPLSFADVIK-LAAQY 145

Query: 149 SVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIIC 208
           +V RML  E    R K  + +S  EF Y ++Q YD V L  +    ++ GG+DQ  N++ 
Sbjct: 146 TVARMLEREDFSKRFKEGRPISIHEFFYPLMQGYDSVALKAD----IEFGGTDQKFNLLM 201

Query: 209 GIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDA 267
           G  L E+       A+  P+L    G  KM K+L   I +N+    P   +    +I D 
Sbjct: 202 GRHLQEQFGQEPQVAIMMPILEGLDGVNKMSKSLGNYIGINE---PPGEIYGKAMSIPDD 258

Query: 268 DVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKIIATEITTMVHGREEAEKAATAAM 324
            +V + + +T + + E++ +    K  G    +AK  +A  +  + HG E A+ A    +
Sbjct: 259 LMVRYYELVTDVSLEELEAIRHGLKTGGLHPRDAKMRLAHTLVRLYHGIEAADNAQAEFI 318

Query: 325 ECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSII 384
             F       +MP IS+   +    + L  L+V+ G A S +EA+R ++  A+KIN   I
Sbjct: 319 RVFQQRDIPTNMPEISLPASDAP--VWLPKLLVQLGLAVSNSEAKRAIQQGAVKINGEKI 376

Query: 385 SNEKLQIKLQD 395
           +N   ++ + D
Sbjct: 377 TNVDEEVTIAD 387


>gi|260890533|ref|ZP_05901796.1| hypothetical protein GCWU000323_01711 [Leptotrichia hofstadii
           F0254]
 gi|260859775|gb|EEX74275.1| tyrosine--tRNA ligase [Leptotrichia hofstadii F0254]
          Length = 412

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 102/361 (28%), Positives = 181/361 (50%), Gaps = 23/361 (6%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D T S LH GH   L  L   Q  GH+ + L+G  T  IGDP+ + E+R+M+  +++
Sbjct: 53  LGIDPTGSELHLGHAVPLRRLKQFQDLGHEVLFLIGTFTGRIGDPTGKSETRKMLSEEQV 112

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
            ENI+     +   +K         ++ N  WL  +   D L  + S F+V++M+S E  
Sbjct: 113 SENIK----TYLDQVKLILDLDKIKVVYNADWLEKLSLSDALN-LLSQFTVSQMISREDF 167

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             RL   + +S +EF Y ILQ YD VEL  +    +++G ++Q  N++ G DL +     
Sbjct: 168 SKRLAENKPVSLIEFMYPILQGYDSVELKAD----VELGATEQKFNLLRGRDLQKNFGQE 223

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
           +   +  P+L    G  KM K+L   I +     +P + +    +I D  + ++   +T 
Sbjct: 224 QQVCMIMPILVGLDGVEKMSKSLGNYIGVK---DAPNDMFGKVMSISDELMENYYTMITD 280

Query: 279 LPMSEIDRM-AKLQGKEIN--EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQH 335
           +P  +I  + A++    ++  EAKK +  E+  + +G    E+AA  A + F+ ++ S+ 
Sbjct: 281 VPFEKIAEIKAQIADGSLHPMEAKKQLGAEVVKIYYG----EEAAKEARDWFE-NVFSKR 335

Query: 336 MPTISISKDEVSRG-MGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL 393
              + + + EV  G + ++ L+VK A     T+EARR +     KIN+  I + K  + +
Sbjct: 336 NLDVDLPEVEVPYGEINVIDLLVKEAKLLGGTSEARRLISQGGFKINDEAIKDIKANVNV 395

Query: 394 Q 394
           +
Sbjct: 396 E 396


>gi|153951241|ref|YP_001397639.1| tyrosyl-tRNA synthetase [Campylobacter jejuni subsp. doylei 269.97]
 gi|152938687|gb|ABS43428.1| tyrosyl-tRNA synthetase [Campylobacter jejuni subsp. doylei 269.97]
          Length = 401

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 107/361 (29%), Positives = 180/361 (49%), Gaps = 22/361 (6%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   L  + +LQK G     L+G  T  IGDPS +  +R+ +  +++ 
Sbjct: 42  GFDPTAPDLHLGHSVVLTKMAFLQKHGAIVQFLIGDFTGQIGDPSGKSATRKKLDKEQVL 101

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
            N +     + + +     K    +  N TWL  +    ++ E+ S FSV RML  +   
Sbjct: 102 INAK----TYETQVFKVLDKEKTQIKFNSTWLNELGAAGIV-ELASTFSVARMLERDDFT 156

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R K +  +S  EF Y +LQ YD V L  +    ++MGG+DQ  N++ G  L       K
Sbjct: 157 KRFKEQSPISICEFLYPLLQGYDSVALKSD----IEMGGTDQKFNLLMGRQLQRIYSIGK 212

Query: 221 LFA-LTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
             A +  PLL    G  KM KTL+  I + ++     + +    +I D  +  + + L+ 
Sbjct: 213 EQAVIMMPLLEGLDGVNKMSKTLNNYIGVTEKAN---DMYAKILSISDELMFRYYELLSQ 269

Query: 279 LPMSEIDRMAK--LQGK-EINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQH 335
             + EI ++ K   QG     +AK+ +A EIT   H +EEA  A +     FD  IHSQ+
Sbjct: 270 KSLEEIAQIKKDIEQGNLHPKKAKENLALEITERFHSKEEANNAKSE----FD-RIHSQN 324

Query: 336 MPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
                +++ E+   + L   +V+ G  +ST+ ARR + +NA+ +N+  +S+E++ ++  +
Sbjct: 325 ALPSDMAEFEIQGKIWLAKALVECGLESSTSAARRSISANAVSVNSQKVSDEQMHLEQGE 384

Query: 396 F 396
           +
Sbjct: 385 Y 385


>gi|220935571|ref|YP_002514470.1| tyrosyl-tRNA synthetase [Thioalkalivibrio sp. HL-EbGR7]
 gi|219996881|gb|ACL73483.1| tyrosyl-tRNA synthetase [Thioalkalivibrio sp. HL-EbGR7]
          Length = 400

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 107/399 (26%), Positives = 189/399 (47%), Gaps = 27/399 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLML 59
           MP F SD L ++  RG  H+I    EL      G  +    G+D TA  LH GH   L  
Sbjct: 1   MPGF-SDQLDLI-RRG-SHEILLEDELKQRLESGRPLRIKAGFDPTAPDLHLGHTVLLNK 57

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKG-IFSSFIKYGT 118
           L   Q  GH+ I L+G  T +IGDP+ +  +R  +   E+ +N    +G IF       T
Sbjct: 58  LRQFQDLGHEAIFLIGDFTGMIGDPTGKSATRPPLTRDEVIDNARTYEGQIFKILDPEKT 117

Query: 119 GKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMI 178
                L++ N +W+  +   D++ ++ +  +V RML  +    R    Q ++  EF Y +
Sbjct: 118 -----LVMFNSSWMGEMSSADMI-QLAAKHTVARMLERDDFHKRYSSGQPIAIHEFLYPL 171

Query: 179 LQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KM 237
           +Q YD V L  +    +++GG+DQ  N++ G +L +    P    +T P+L    G  KM
Sbjct: 172 VQGYDSVALKAD----VELGGTDQKFNLLVGRELQKHYGQPPQVVMTMPILEGLDGVQKM 227

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI----DRMAKLQGK 293
            K+L   I +N+   +P   +    ++ D  +  + + L+  PM +I    DR+A   G+
Sbjct: 228 SKSLGNYIGINE---APDEMFGKLMSVSDELMWRYFELLSFRPMQDIEVFRDRIAA--GE 282

Query: 294 EINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLL 353
              + K ++  E+    HG   A +     ++ F      + +P ++++    S G+ L 
Sbjct: 283 NPRDIKFLLGEELVERFHGARAAGEVRGRFIDRFQKGAMPEDIPGVTVAAP--SDGLPLP 340

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
            L+ +AG   ST+EA R ++  A++ +   + +  L+ +
Sbjct: 341 NLLKEAGLVGSTSEAMRMIRQGAVRRDGERVEDPGLKFE 379


>gi|207092023|ref|ZP_03239810.1| tyrosyl-tRNA synthetase [Helicobacter pylori HPKX_438_AG0C1]
          Length = 402

 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 106/377 (28%), Positives = 180/377 (47%), Gaps = 34/377 (9%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   +  L  LQ+ G +   L+G  T++IGDP+ ++E+R+ +  +++ 
Sbjct: 44  GFDPTAPDLHLGHTVLIQKLALLQQYGARVKFLIGDFTAMIGDPTGKNETRKPLNREQVL 103

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           EN +     +   I     +    +  N TWL ++    ++ E+ + FSV RML  +   
Sbjct: 104 ENAK----TYEEQIYKILDEKHTEVCFNSTWLDALGAKGMI-ELCAKFSVARMLERDDFT 158

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R K  + +S +EF Y +LQ YD V +    D  +++GG+DQ  N++ G  L       K
Sbjct: 159 KRYKENRPISIVEFLYPLLQGYDSVAI----DADIELGGNDQKFNLLVGRFLQRAYGLNK 214

Query: 221 -LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               +T PLL    G  KM K+L   + + +E   P   +    ++ D  +  +   L+ 
Sbjct: 215 EQSVITMPLLEGLDGVQKMSKSLGNYVGITEE---PNAMFGKIMSVSDDLMWRYYTLLSA 271

Query: 279 LPMSEIDRMAK------LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIH 332
             + EI+ +        L  K + E    +A EI    +  E+A KA     E F     
Sbjct: 272 KTLEEIEDLKHGILNQTLHPKAVKED---LAGEIVARYYDNEQAIKAK----EQFSKVFS 324

Query: 333 SQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
           +  +P I +S+ +   G+G+L ++ + GF  ST++ARR ++   +KIN  +I NE  +  
Sbjct: 325 ANLLPEI-LSESDFDEGVGILDVLKQIGFCPSTSQARRDIQGGGVKINQEVIKNESYRF- 382

Query: 393 LQDFDSTGNIKLSFGKK 409
                  GN  +  GKK
Sbjct: 383 -----VKGNYVIQLGKK 394


>gi|294791997|ref|ZP_06757145.1| tyrosine--tRNA ligase [Veillonella sp. 6_1_27]
 gi|294457227|gb|EFG25589.1| tyrosine--tRNA ligase [Veillonella sp. 6_1_27]
          Length = 402

 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 104/361 (28%), Positives = 173/361 (47%), Gaps = 22/361 (6%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  L   Q+ GH+ + ++GG T+ IGDP+ +  +R  +  +E+
Sbjct: 42  LGLDPTAPDIHLGHTVPLRKLRLFQEFGHQVVIVIGGFTARIGDPTGKSVTRPPLTKEEV 101

Query: 100 QENIEKIK-GIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
            +N E  K  IF       T     ++ +N  WL S+ + D+LR + S ++V RM+  + 
Sbjct: 102 LKNAETYKTQIFKVLDPEKT-----IVRDNSEWLESMNFADVLR-LASSYTVARMMERDD 155

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
              R K  + +   EF Y ++Q +D V L  +    ++ GG+DQ  N++ G  L E    
Sbjct: 156 FSKRFKEGRPIGVHEFMYPLMQGHDSVALHAD----VEFGGTDQTFNLLMGRHLQELEGQ 211

Query: 219 PKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT 277
                +T PLL    G  KM K+L   I +++E   P   +    +I D  ++ +   +T
Sbjct: 212 EPQVVITMPLLEGLDGIQKMSKSLGNYIGIDEE---PKEMYGKAMSIPDELMMRYFMLVT 268

Query: 278 TLPMSEIDRMAK-LQGKEIN--EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQ 334
            + + E + MAK L+  E++  +AK  +A  I  + HG E A +A       F       
Sbjct: 269 DMSIEEQEDMAKRLESGELHPRDAKMQLARTIVRLYHGEEAAFEAEEEFKRVFQQRAMPT 328

Query: 335 HMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
            +P  ++  D  +  + +      AG   S  EARR +K+ A K+N    + E L  KL+
Sbjct: 329 DIPEYAM--DAPTEPIFVPQFCTDAGLTASNGEARRSIKAGAFKVNGEKYTEENL--KLE 384

Query: 395 D 395
           D
Sbjct: 385 D 385


>gi|329124010|ref|ZP_08252557.1| tyrosine--tRNA ligase [Haemophilus aegyptius ATCC 11116]
 gi|327467435|gb|EGF12933.1| tyrosine--tRNA ligase [Haemophilus aegyptius ATCC 11116]
          Length = 395

 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 107/381 (28%), Positives = 175/381 (45%), Gaps = 29/381 (7%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           ILSE   I ++   R L +          +G D TA  +H GH   L  L   Q+ GH+ 
Sbjct: 18  ILSETDLIEKLKENRPLKV---------KLGADPTAPDIHLGHTVVLNKLRQFQQLGHEV 68

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
             L+G  T ++GDPS ++ +R  +  +++  N E  K       K    +   ++ N+E 
Sbjct: 69  YFLIGDFTGMVGDPSGKNATRPPLSREDVLRNAETYK---EQIYKILDPQKTKIVFNSE- 124

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           WL  +    ++R + S ++V RML  +  + R    Q ++  EF Y +LQ YD V L   
Sbjct: 125 WLSKLGTEGMIR-LASNYTVARMLERDDFKKRFGNNQPIAIHEFIYPLLQGYDSVAL--- 180

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNK 249
            D  +++GG+DQ  N++ G +L +        A+T PLL    G  KM K+L   I + +
Sbjct: 181 -DADVELGGTDQKFNLLVGRELQKSAGKKPQVAITLPLLVGLDGEKKMSKSLGNYIGVTE 239

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATEIT 307
              +P + +    +I D  +  +   L+  P+SEI ++      GK   + K ++A E+ 
Sbjct: 240 ---APSDMFGKVMSISDELMWDWYNLLSFRPLSEIAQLKSEVENGKNPRDVKILLAKELI 296

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
              H  E A  A    +  F        MP  + S +     +GL TL+ +A    ST+E
Sbjct: 297 ARFHNEEAANAAEQEFINRFQKGAMPDEMPEFTFSGE-----IGLATLLKEAALVPSTSE 351

Query: 368 ARRHLKSNAIKINNSIISNEK 388
           A R  +   +KIN   + N K
Sbjct: 352 AIRSAQQGGVKINGEKVDNVK 372


>gi|218438278|ref|YP_002376607.1| tyrosyl-tRNA synthetase [Cyanothece sp. PCC 7424]
 gi|218171006|gb|ACK69739.1| tyrosyl-tRNA synthetase [Cyanothece sp. PCC 7424]
          Length = 406

 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 105/380 (27%), Positives = 184/380 (48%), Gaps = 31/380 (8%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D T S +H GH      L   Q  GH  + ++G  T+ IGDP+ + E R+ +  Q++
Sbjct: 47  LGIDPTGSEIHLGHSIPFRKLRAFQDAGHTAVVIIGDFTAQIGDPTGKSEVRKQLTPQQV 106

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           + N E         + + T     +  N+E WL  +   D+L+ +G+  +V +ML+ E  
Sbjct: 107 KSNAEDYLNQLRPILDFDTPGRLEIRYNSE-WLSQLNLSDILQLLGT-MTVGQMLAKEGF 164

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL--K 217
             R ++E  +   EF Y ++Q YD V +    D  +++GG+DQ  NI  G DL +R   K
Sbjct: 165 AQRYEQENPIYLHEFLYPLMQGYDSVAI----DADVELGGTDQKFNIAVGRDL-QRFFGK 219

Query: 218 TPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT 277
            P+   L   LL T    KM K+L+  + L ++  S Y+  +      DA +  + + LT
Sbjct: 220 KPQFGLLLPLLLGTDGVQKMSKSLNNYVGLREDALSMYSKLE---KTPDAVIKDYFELLT 276

Query: 278 TLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFD--MSIHSQH 335
            LP+ +I    +       +A+K++A E+ +  HG E A+ A  AA +      +  +  
Sbjct: 277 NLPLDQIPSNPR-------DAQKLLALEVVSQFHGVEAAKSAQKAAQDLVQGGSTASADA 329

Query: 336 MPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           +P  S+S  E+     L  ++  +G  +S+ E RR ++  A++++   I+   L      
Sbjct: 330 VPEFSLS--EIEFPAKLFYILNASGLCSSSGEGRRQIQGGAVRLDGDRITEVDLT----- 382

Query: 396 FDSTGNIK---LSFGKKNHI 412
           F+S  ++K   L  GKK  +
Sbjct: 383 FESPEDLKDKVLQVGKKKFV 402


>gi|303250978|ref|ZP_07337167.1| tyrosyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|307253125|ref|ZP_07535006.1| Tyrosyl-tRNA synthetase 2 [Actinobacillus pleuropneumoniae serovar
           6 str. Femo]
 gi|302650195|gb|EFL80362.1| tyrosyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|306859419|gb|EFM91451.1| Tyrosyl-tRNA synthetase 2 [Actinobacillus pleuropneumoniae serovar
           6 str. Femo]
          Length = 396

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 103/380 (27%), Positives = 175/380 (46%), Gaps = 29/380 (7%)

Query: 10  SILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
           +I SE   I ++   R L I          +G D TA  +H GH   L  L   Q+ GH+
Sbjct: 18  NIYSEEDLIEKLKENRPLRI---------KLGADPTAPDIHLGHTVVLNKLRQFQQLGHE 68

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
            I L+G  T ++GDPS ++ +R  +  +++  N E  K       K        ++ N+E
Sbjct: 69  VIFLIGDFTGMVGDPSGKNSTRPPLTREDVLRNAETYK---QQLFKILDPNKTRVVFNSE 125

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
            WL  +    ++R + S ++V RML  +  + R    QS++  EF Y +LQ +D V L  
Sbjct: 126 -WLGKLGTEGMIR-LASNYTVARMLERDDFKKRFTNNQSIAIHEFIYPLLQGHDSVAL-- 181

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLN 248
             +  +++GG+DQ  N++ G +L +        A+T PLL    G  KM K+L   I + 
Sbjct: 182 --EADVELGGTDQTFNLLVGRELQKSAGQKPQVAMTLPLLVGLDGEKKMSKSLGNYIGVT 239

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATEI 306
               +P + +    +I D  +  +   L+  P+ EI ++     +GK   + K ++A E+
Sbjct: 240 ---DAPSDMFGKVMSISDELMWDWYNLLSFRPLDEIAQLKADVAEGKNPRDVKILLAKEL 296

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
               H +  A+ A    +  F        MP  +   +     +GL TL+ +AG   ST+
Sbjct: 297 IARFHDQAAADSAEQEFINRFQKGAIPDEMPEFTFEGE-----IGLATLLKEAGLVASTS 351

Query: 367 EARRHLKSNAIKINNSIISN 386
           EA R  +   +KI+   I +
Sbjct: 352 EAIRSAQQGGVKIDGEKIED 371


>gi|303252484|ref|ZP_07338648.1| tyrosyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2
           str. 4226]
 gi|307246392|ref|ZP_07528468.1| Tyrosyl-tRNA synthetase 2 [Actinobacillus pleuropneumoniae serovar
           1 str. 4074]
 gi|307248519|ref|ZP_07530537.1| Tyrosyl-tRNA synthetase 2 [Actinobacillus pleuropneumoniae serovar
           2 str. S1536]
 gi|307250750|ref|ZP_07532683.1| Tyrosyl-tRNA synthetase 2 [Actinobacillus pleuropneumoniae serovar
           4 str. M62]
 gi|307255377|ref|ZP_07537187.1| Tyrosyl-tRNA synthetase 2 [Actinobacillus pleuropneumoniae serovar
           9 str. CVJ13261]
 gi|307259827|ref|ZP_07541545.1| Tyrosyl-tRNA synthetase 2 [Actinobacillus pleuropneumoniae serovar
           11 str. 56153]
 gi|307261956|ref|ZP_07543614.1| Tyrosyl-tRNA synthetase 2 [Actinobacillus pleuropneumoniae serovar
           12 str. 1096]
 gi|302648685|gb|EFL78877.1| tyrosyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2
           str. 4226]
 gi|306852725|gb|EFM84954.1| Tyrosyl-tRNA synthetase 2 [Actinobacillus pleuropneumoniae serovar
           1 str. 4074]
 gi|306854995|gb|EFM87180.1| Tyrosyl-tRNA synthetase 2 [Actinobacillus pleuropneumoniae serovar
           2 str. S1536]
 gi|306857218|gb|EFM89341.1| Tyrosyl-tRNA synthetase 2 [Actinobacillus pleuropneumoniae serovar
           4 str. M62]
 gi|306861686|gb|EFM93670.1| Tyrosyl-tRNA synthetase 2 [Actinobacillus pleuropneumoniae serovar
           9 str. CVJ13261]
 gi|306866125|gb|EFM97995.1| Tyrosyl-tRNA synthetase 2 [Actinobacillus pleuropneumoniae serovar
           11 str. 56153]
 gi|306868367|gb|EFN00186.1| Tyrosyl-tRNA synthetase 2 [Actinobacillus pleuropneumoniae serovar
           12 str. 1096]
          Length = 396

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 103/380 (27%), Positives = 175/380 (46%), Gaps = 29/380 (7%)

Query: 10  SILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
           +I SE   I ++   R L I          +G D TA  +H GH   L  L   Q+ GH+
Sbjct: 18  NIYSEEDLIEKLKENRPLRI---------KLGADPTAPDIHLGHTVVLNKLRQFQQLGHE 68

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
            I L+G  T ++GDPS ++ +R  +  +++  N E  K       K        ++ N+E
Sbjct: 69  VIFLIGDFTGMVGDPSGKNSTRPPLTREDVLRNAETYK---QQLFKILDPNKTRVVFNSE 125

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
            WL  +    ++R + S ++V RML  +  + R    QS++  EF Y +LQ +D V L  
Sbjct: 126 -WLGKLGTEGMIR-LASNYTVARMLERDDFKKRFTNNQSIAIHEFIYPLLQGHDSVAL-- 181

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLN 248
             +  +++GG+DQ  N++ G +L +        A+T PLL    G  KM K+L   I + 
Sbjct: 182 --EADVELGGTDQTFNLLVGRELQKSAGQKPQVAMTLPLLVGLDGEKKMSKSLGNYIGVT 239

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATEI 306
               +P + +    +I D  +  +   L+  P+ EI ++     +GK   + K ++A E+
Sbjct: 240 ---DAPSDMFGKVMSISDELMWDWYNLLSFRPLDEIAQLKANVAEGKNPRDVKILLAKEL 296

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
               H +  A+ A    +  F        MP  +   +     +GL TL+ +AG   ST+
Sbjct: 297 IARFHDQAAADSAEQEFINRFQKGAIPDEMPEFTFEGE-----IGLATLLKEAGLVASTS 351

Query: 367 EARRHLKSNAIKINNSIISN 386
           EA R  +   +KI+   I +
Sbjct: 352 EAIRSAQQGGVKIDGEKIED 371


>gi|308184559|ref|YP_003928692.1| tyrosyl-tRNA synthetase [Helicobacter pylori SJM180]
 gi|308060479|gb|ADO02375.1| tyrosyl-tRNA synthetase [Helicobacter pylori SJM180]
          Length = 402

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 105/377 (27%), Positives = 181/377 (48%), Gaps = 34/377 (9%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   +  L  LQ+ G +   L+G  T++IGDP+ ++E+R+ +  +++ 
Sbjct: 44  GFDPTAPDLHLGHTVLIQKLALLQQYGARVKFLIGDFTAMIGDPTGKNETRKPLNREQVL 103

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           EN +     +   I     +    +  N TWL ++    ++ E+ + FSV RML  +   
Sbjct: 104 ENAK----TYEEQIYKILDQQHTEVCFNSTWLDALGTKGMI-ELCAKFSVARMLERDDFT 158

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R K  + +S +EF Y +LQ YD V +    D  +++GG+DQ  N++ G  L       K
Sbjct: 159 KRYKENRPISIVEFLYPLLQGYDSVAM----DADIELGGNDQKFNLLVGRFLQRAYGLNK 214

Query: 221 LFA-LTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
             + +T PLL    G  KM K+L   + + +E   P   +    ++ D  +  +   L+ 
Sbjct: 215 EQSIITMPLLEGLDGVQKMSKSLGNYVGITEE---PNAMFGKIMSVSDDLMWRYYTLLSA 271

Query: 279 LPMSEIDRMAK------LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIH 332
             + EI+ +        L  K + E    +A EI    +  ++A KA     E F     
Sbjct: 272 KTLEEIEDLKHGILNQTLHPKAVKEE---LAGEIVARYYNNDQAFKAK----EQFSKVFS 324

Query: 333 SQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
           +  +P I +S+ +   G+G+L ++ + GF  ST++ARR ++   +KIN  +I NE  +  
Sbjct: 325 ANLLPEI-LSESDFDEGVGILDVLKQIGFCPSTSQARRDIQGGGVKINQEVIKNESYRF- 382

Query: 393 LQDFDSTGNIKLSFGKK 409
                  GN  +  GKK
Sbjct: 383 -----VKGNYVIQLGKK 394


>gi|188527381|ref|YP_001910068.1| tyrosyl-tRNA synthetase [Helicobacter pylori Shi470]
 gi|188143621|gb|ACD48038.1| tyrosyl-tRNA synthetase [Helicobacter pylori Shi470]
          Length = 402

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 104/386 (26%), Positives = 179/386 (46%), Gaps = 52/386 (13%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   +  L  LQ+ G +   L+G  T++IGDP+ ++E+R+ +  +++ 
Sbjct: 44  GFDPTAPDLHLGHTVLIQKLALLQQYGARVKFLIGDFTAMIGDPTGKNETRKPLNREQVL 103

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           EN +     +   I     +    +  N TWL ++    ++ E+ + FSV RML  +   
Sbjct: 104 ENAK----TYEEQIYKILDQKHTEVCFNSTWLDALGAKGII-ELCAKFSVARMLERDDFT 158

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R K  + +S +EF Y +LQ YD V +    D  +++GG+DQ  N++ G  L       K
Sbjct: 159 KRYKENRPISIVEFLYPLLQGYDSVAM----DADIELGGNDQKFNLLVGRFLQRAYGLNK 214

Query: 221 -LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYN---------FWQYWRNIDDADV 269
               +T PLL    G  KM K+L   + + +E  + +           W+Y+        
Sbjct: 215 EQSVITMPLLEGLDGVQKMSKSLGNYVGITEEPNAMFGKIMSVSDDLMWRYY-------- 266

Query: 270 VSFAKRLTTLPMSEIDRMAKLQGKEINE------AKKIIATEITTMVHGREEAEKAATAA 323
                  T L    ++++  L+   +N+       K+ +A EI    +  E+A KA    
Sbjct: 267 -------TLLSAKTLEKIEDLKHGILNQTLHPKAVKEDLAGEIVARYYDNEQAIKAK--- 316

Query: 324 MECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSI 383
            E F     +  +P I +  D    G+G+L ++ + GF  ST++ARR ++   +KIN  +
Sbjct: 317 -EQFSKVFGANLLPEILLESD-FDEGVGILDVLKQIGFCPSTSQARRDIQGGGVKINQEV 374

Query: 384 ISNEKLQIKLQDFDSTGNIKLSFGKK 409
           + NE  +         GN  +  GKK
Sbjct: 375 VKNENYRF------VKGNYVIQLGKK 394


>gi|261856719|ref|YP_003264002.1| tyrosyl-tRNA synthetase [Halothiobacillus neapolitanus c2]
 gi|261837188|gb|ACX96955.1| tyrosyl-tRNA synthetase [Halothiobacillus neapolitanus c2]
          Length = 402

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 105/400 (26%), Positives = 189/400 (47%), Gaps = 49/400 (12%)

Query: 10  SILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
            IL E+  + ++ + R L I           G+D TA  LH GH   +  L   Q+ GH 
Sbjct: 18  EILLEQDLVERLKSGRTLRIKA---------GFDPTAPDLHLGHTVLINKLRQFQQMGHH 68

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKI-KGIFSSFIKYGTGKTDALMLNN 128
            + L+G  T +IGDP+ +  +R  +  +++QEN +   + IF         KT+ +   N
Sbjct: 69  ILFLIGDFTGMIGDPTGKSATRPTLTREQVQENAKTYQRQIFKIL---DPDKTEIVF--N 123

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
            TW+ ++   DL+ E+ S  +V RML  +    R    Q ++  EF Y ++Q YD V L 
Sbjct: 124 STWMGAMTAADLI-ELASRQTVARMLERDDFSKRYTGHQPIAIHEFLYPLVQGYDSVALK 182

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWL 247
            +    +++GG+DQ  N++ G +L ++   P+   +T PLL    G  KM K+L   I +
Sbjct: 183 AD----VELGGTDQKFNLLMGRELQKQYGQPQQTVITMPLLEGLDGVQKMSKSLGNYIGI 238

Query: 248 NKEMTSPYN---------FWQYWRNIDDADVVSFAKRLTTLPMSEIDRM-AKLQ-GKEIN 296
            +     +           W+Y+      D++SF       P+ EI ++ A++Q G+   
Sbjct: 239 EEVPDEQFGKLMKISDELMWRYF------DLLSFR------PLVEIKKLRAEMQAGRNPR 286

Query: 297 EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLI 356
           + K  +A EI    HG      +   A E F        +P   + + ++  G+G+   +
Sbjct: 287 DIKFELAMEIVDRFHG----VGSGAEARERFIARFAKSEIPD-DLPEHDLPAGLGVAQAL 341

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
            + G   ST+EA RH+K+ A+++   ++ ++   ++  +F
Sbjct: 342 KEIGMVASTSEAFRHMKAGAVRLGGEVVDDKGAVLEAGEF 381


>gi|162448779|ref|YP_001611146.1| hypothetical protein sce0509 [Sorangium cellulosum 'So ce 56']
 gi|161159361|emb|CAN90666.1| tyrS [Sorangium cellulosum 'So ce 56']
          Length = 409

 Score =  126 bits (317), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 101/402 (25%), Positives = 189/402 (47%), Gaps = 46/402 (11%)

Query: 21  ISNPRELDILCSQGVVTAYI------------------GYDLTASSLHAGHLTQLMLLFW 62
           +   R+L ILC +GVV  ++                  G+D T   LH GH   +  +  
Sbjct: 2   VPAERQLQILC-KGVVDLHVRAELEERIREGKPLRVKAGFDPTRPDLHLGHTVVMQKMRE 60

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD 122
            Q+ GH  + ++G  T+++GDP+ ++E R  +  +E+    E  +    +F      +T+
Sbjct: 61  FQELGHHVVFVVGDFTAMVGDPTGKNELRPRLSREEVVAAAETYQA--QAFKVLDKNRTE 118

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
             +  N  WL  +    ++ E+ + ++V RML  +  + R +  + +   EF Y +LQAY
Sbjct: 119 --VRYNSEWLNKLDPTQMI-ELCAKYTVARMLERDDFKKRYEEARPIYVHEFMYPLLQAY 175

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTAS--------- 233
           D VEL    +  +++GG+DQ  N++   DL  R        +T PLL   +         
Sbjct: 176 DSVEL----EADIELGGTDQLFNLLVARDLMPRYGKRAQMVMTMPLLEGTNARVEDGKVV 231

Query: 234 GTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQ 291
           G KM K+    + + +    P++  Q    +DD  +  + + L++ P  EI   R A L+
Sbjct: 232 GAKMSKSADNYVGITE---PPFDMLQKLMLVDDGVIWRYMELLSSRPPEEIAALREAVLR 288

Query: 292 GKE-INEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGM 350
           G++ +   K++ A EI T  H  E+A +AA             +++  + ++ D  +  +
Sbjct: 289 GEQGVIGVKELFAQEIVTRFHSAEDA-RAALERRRSVAAGGLPENIEELQVASDRDTIPI 347

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
           G    +  AG A ST+ ARR +K  A+ +   ++ +E+L+++
Sbjct: 348 G--NALALAGLAESTSAARRLVKGGAVHLEGEVVKDEQLKLE 387


>gi|240950106|ref|ZP_04754401.1| tyrosyl-tRNA synthetase [Actinobacillus minor NM305]
 gi|240295407|gb|EER46176.1| tyrosyl-tRNA synthetase [Actinobacillus minor NM305]
          Length = 396

 Score =  126 bits (317), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 102/382 (26%), Positives = 179/382 (46%), Gaps = 29/382 (7%)

Query: 10  SILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
            + SE   I ++   R L +          +G D TA  +H GH   L  L   Q  GH+
Sbjct: 18  DVYSEADLIEKLKENRPLRV---------KLGADPTAPDIHLGHTVVLNKLRQFQNFGHE 68

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
            I L+G  T+ +GDPS ++ +R  +  +++  N E  K       K    +   ++ N++
Sbjct: 69  VIFLIGDFTATVGDPSGKNATRPPLSREDVLRNAETYK---EQIYKILDPQKTRIVFNSD 125

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
            WL  +  + ++R + S ++V RML  +  + R    QS++  EF Y +LQ +D V L  
Sbjct: 126 -WLGELGTVGMIR-LASNYTVARMLERDDFKKRFANNQSIAIHEFIYPLLQGHDSVAL-- 181

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLN 248
             +  +++GG+DQ  N++ G +L +        A+T PLL    G  KM K+L   I + 
Sbjct: 182 --EADIELGGTDQTFNLLIGRELQKAAGQKPQVAMTLPLLVGLDGEKKMSKSLGNYIGVT 239

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM-AKLQ-GKEINEAKKIIATEI 306
           +   +P   +    +I D  +  +   L+  P++EI ++ A ++ GK   + K ++A EI
Sbjct: 240 E---APNEMFGKIMSISDELMWDWYNLLSFRPLTEIAQLKADVEAGKNPRDVKILLAKEI 296

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
               H   +A+ A    +  F        MP  +   +     +GL TL+ +AG   ST+
Sbjct: 297 IARFHSEADADAAEQEFINRFQKGAMPDEMPEFTFEGE-----IGLATLLKEAGLVPSTS 351

Query: 367 EARRHLKSNAIKINNSIISNEK 388
           EA R  +   +KI+   + + K
Sbjct: 352 EAIRSAQQGGVKIDGEKVDDVK 373


>gi|270307963|ref|YP_003330021.1| tyrosyl-tRNA synthetase [Dehalococcoides sp. VS]
 gi|270153855|gb|ACZ61693.1| tyrosyl-tRNA synthetase [Dehalococcoides sp. VS]
          Length = 396

 Score =  126 bits (317), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 102/369 (27%), Positives = 176/369 (47%), Gaps = 19/369 (5%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D ++  +H GH+  L  L  LQ  GH+ + ++G  T+ IGDPS    +R M+ +++++
Sbjct: 40  GFDPSSPDIHLGHMVALRKLRQLQDLGHQVVLIVGDWTAQIGDPSGASVTRPMLSAEQVK 99

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
            N    K     F K        +   +E W  + K  D++R + S F+V +ML+ +   
Sbjct: 100 AN---AKTYLEQFFKIVDKDKTEVRWQSE-WYANFKLEDVVR-LSSKFTVAQMLARDDFA 154

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R    + +S  E  Y +LQAYD V +  +    ++ GG+DQ  N++ G +L E L    
Sbjct: 155 KRYAAGKPISVTELLYPMLQAYDSVMVKSD----VEFGGTDQKFNLLVGRELQEMLGQKP 210

Query: 221 LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTL 279
              L  P+L    G  KM K+L   I + +E   P   +    +I D  ++ + + +T +
Sbjct: 211 QQVLMVPILVGTDGVHKMSKSLGNYIGVAEE---PTEIFGKCMSIPDELILQYFELVTDI 267

Query: 280 PMSEI-DRMAKLQGKEINEA--KKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM 336
           P +EI D   ++    IN    KK +A E+ T ++    AE+A              + M
Sbjct: 268 PATEIADFKNQMANGLINPMVLKKRLARELITQLYSTAAAEEADAQFTRVVQRGEIPEDM 327

Query: 337 PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
           P   +   E  + + ++  I+KA  A S +EARR L+   ++IN++ IS+    +K  D 
Sbjct: 328 PECRL---ENGKSICVIDFIIKADLAKSKSEARRLLEQGGVEINSAKISDPGTTVKCGDI 384

Query: 397 DSTGNIKLS 405
              G  + S
Sbjct: 385 IKAGKRRYS 393


>gi|109947217|ref|YP_664445.1| tyrosyl-tRNA synthetase [Helicobacter acinonychis str. Sheeba]
 gi|109714438|emb|CAJ99446.1| tyrS [Helicobacter acinonychis str. Sheeba]
          Length = 402

 Score =  126 bits (317), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 103/377 (27%), Positives = 182/377 (48%), Gaps = 34/377 (9%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   +  L  LQ+ G +   L+G  T++IGDP+ ++E+R+ +   ++ 
Sbjct: 44  GFDPTAPDLHLGHTVLIQKLALLQQYGARVKFLIGDFTAMIGDPTGKNETRKPLNQDQVL 103

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           EN +     +   I     +    +  N TWL S+    ++ E+ + FSV RML  +   
Sbjct: 104 ENAQ----TYEEQIYKILDQKHTEVCFNSTWLDSLGTKGMV-ELCAKFSVARMLERDDFT 158

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R K  + +S +EF Y +LQ YD V +    D  +++GG+DQ  N++ G  L       K
Sbjct: 159 KRYKENRPISIVEFLYPLLQGYDSVAM----DADIELGGNDQKFNLLVGRFLQRAYGLNK 214

Query: 221 LFA-LTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
             + +T PLL    G  KM K+L   + + +E   P   +    ++ D  +  +   L+ 
Sbjct: 215 EQSIITMPLLEGLDGVQKMSKSLGNYVGITEE---PNAMFGKLMSVSDDLMWRYYTLLSD 271

Query: 279 LPMSEIDRMAK------LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIH 332
             + EI+ +        L  K + E    +A+EI T  +G ++A KA     E F     
Sbjct: 272 KTLEEIEDLKHGILNQTLHPKAVKED---LASEIVTRYYGEDQANKAK----EQFSKVFS 324

Query: 333 SQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
           +  +P  ++S+     G+G+L ++ + GF  ST++ARR ++   ++I+  ++ +E  +  
Sbjct: 325 ANLLPE-NLSESAFDEGVGILDVLKQIGFCPSTSQARRDIQGGGVRIDQEVVKDESYRF- 382

Query: 393 LQDFDSTGNIKLSFGKK 409
                  GN  +  GKK
Sbjct: 383 -----VKGNYVIQLGKK 394


>gi|16904661|dbj|BAB71952.1| putative tyrosine-tRNA synthetase [Rhodococcus sp. T09]
          Length = 232

 Score =  126 bits (317), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 76/223 (34%), Positives = 115/223 (51%), Gaps = 11/223 (4%)

Query: 199 GSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK-TLSGAIWLNKEMTSPYNF 257
           GSDQWGNII G++L  R+    +  LT PL+T+A G K GK T  G++WL++EMTSPY +
Sbjct: 1   GSDQWGNIIAGVELNRRIDAESVHGLTVPLVTSADGKKFGKSTGGGSLWLDQEMTSPYAW 60

Query: 258 WQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKKIIATEITTMVHGREE 315
           +QY+ N  DADV+ + +  T L   E+  +  A  +     EA++ +A E+TT+VHG   
Sbjct: 61  YQYFVNTGDADVIKYLRWFTFLTAEELAELETATAERPHAREAQRRLAAEMTTLVHGEAN 120

Query: 316 AEKAATAAMECFDMS-IHSQHMPTISISKDEVS-------RGMGLLTLIVKAGFATSTNE 367
                 A+   F  + +     PT+  +  E S          G++ L+V +G   S   
Sbjct: 121 TRAVELASQALFGRAELQDLDEPTLGAALREASVAELAPGEPAGIVDLLVLSGLCESKGA 180

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
           ARR +K     +NN  IS+E       D      + +  GK+N
Sbjct: 181 ARRTVKEGGASVNNQKISSEDWTPAPTDLLHGTWLVIRRGKRN 223


>gi|207727940|ref|YP_002256334.1| tyrosyl-trna synthetase protein [Ralstonia solanacearum MolK2]
 gi|206591183|emb|CAQ56795.1| tyrosyl-trna synthetase protein [Ralstonia solanacearum MolK2]
          Length = 433

 Score =  126 bits (317), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 101/363 (27%), Positives = 178/363 (49%), Gaps = 26/363 (7%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  +  LQ  GH+ I L+G  TS IGDPS R+ +R  +  ++I
Sbjct: 76  LGLDPTAPDIHIGHTVVLNKMRQLQDLGHQVIFLIGDFTSTIGDPSGRNATRPPLTREQI 135

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           + N +      S  +     KT+  +  N  W   +    ++ ++ + ++V RM+  +  
Sbjct: 136 EANAQTYYRQASMVLD--PSKTE--IRYNSEWSDPLGARGMI-QLAARYTVARMMERDDF 190

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R K    +S  EF Y ++Q YD V L  +    L++GG+DQ  N++ G +L +     
Sbjct: 191 TKRYKAGVPISVHEFLYPLMQGYDSVALKSD----LELGGTDQKFNLLVGRELQKEYGQE 246

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               LT PLL    G  KM K+    + + +    P   +    +I D  + ++   L+ 
Sbjct: 247 PQCILTMPLLVGLDGVEKMSKSKGNYVGIAE---VPGEMFGKLMSISDDLMWTYFTLLSF 303

Query: 279 LPMSEIDRMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIH---S 333
            PM+EI+RM +    G+   + K ++A EI    H + +AE+    A+E F+        
Sbjct: 304 RPMAEIERMKQEVALGRNPRDCKVLLAQEIIARFHSQADAER----ALEDFNHRARGGVP 359

Query: 334 QHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL 393
             +P I +S   +    G+  L+ +AG   ST+EA R+++   +KI+ ++IS++ L+++ 
Sbjct: 360 DDIPQIELSGAPI----GIAQLLKQAGLCPSTSEANRNIEQGGVKIDGTVISDKGLKVEA 415

Query: 394 QDF 396
             F
Sbjct: 416 GTF 418


>gi|152979484|ref|YP_001345113.1| tyrosyl-tRNA synthetase [Actinobacillus succinogenes 130Z]
 gi|150841207|gb|ABR75178.1| tyrosyl-tRNA synthetase [Actinobacillus succinogenes 130Z]
          Length = 395

 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 107/380 (28%), Positives = 179/380 (47%), Gaps = 29/380 (7%)

Query: 10  SILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
            ILSE   I ++   R L +          +G D TA  +H GH   L  L   Q  GH+
Sbjct: 17  EILSEADLIEKLKENRPLKV---------KLGADPTAPDIHLGHTVVLNKLRQFQNFGHE 67

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
            I L+G  T ++GDPS ++ +R  +  +++  N E  K       K    +   ++ N+E
Sbjct: 68  VIFLIGDFTGMVGDPSGKNTTRPPLSREDVLRNAETYK---QQIFKILDPQKTRIVFNSE 124

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
            WL  +    ++R + S ++V RML  +  + R   +Q ++  EF Y +LQ YD V L  
Sbjct: 125 -WLGQLGTEGMIR-LTSNYTVARMLERDDFKKRFTNQQPIAIHEFIYPLLQGYDSVAL-- 180

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLN 248
             +  +++GG+DQ  N++ G +L +        A+T PLL    G  KM K+L   I + 
Sbjct: 181 --EADVELGGTDQKFNLLVGRELQKSAGKKPQVAITLPLLVGLDGEKKMSKSLGNYIGVT 238

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM-AKLQ-GKEINEAKKIIATEI 306
               +P   +    +I D  +  +   L+  P+SEI+++ A +Q GK   + K ++A E+
Sbjct: 239 ---DAPNEMFGKVMSISDDLMWDWYNLLSFRPLSEINQLKADVQAGKNPRDVKILLAKEL 295

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
               H +  AE A    +  F        MP  +   +     +GL TL+ +AG  TST+
Sbjct: 296 IARFHDQAAAEAAEQEFINRFQKGAMPDEMPEFTFEGE-----IGLATLLKEAGLVTSTS 350

Query: 367 EARRHLKSNAIKINNSIISN 386
           EA R  +   +KI+   + +
Sbjct: 351 EAIRSAQQGGVKIDGEKVED 370


>gi|261867885|ref|YP_003255807.1| tyrosyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D11S-1]
 gi|261413217|gb|ACX82588.1| tyrosyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D11S-1]
          Length = 395

 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 103/384 (26%), Positives = 176/384 (45%), Gaps = 29/384 (7%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           ILSE+  I ++   R L +          +G D TA  +H GH   L  L   Q  GH+ 
Sbjct: 18  ILSEQDLIEKLKENRPLRV---------KLGADPTAPDIHLGHTVVLNKLRQFQNFGHEV 68

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           I L+G  T ++GDPS ++ +R  +  +++  N E  K       K    +   ++ N++ 
Sbjct: 69  IFLIGDFTGMVGDPSGKNTTRPPLSREDVLRNAETYK---QQIFKILDPQKTRIVFNSD- 124

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           WL  +    ++R + S ++V RML  +  + R    Q ++  EF Y +LQ  D V L   
Sbjct: 125 WLGKLGTEGMIR-LASNYTVARMLERDDFKKRFSNNQPIAIHEFIYPLLQGQDSVAL--- 180

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNK 249
            +  +++GG+DQ  N++ G +L +        A+T PLL    G  KM K+L   I +  
Sbjct: 181 -EADVELGGTDQKFNLLVGRELQKSAGQKPQVAITLPLLVGLDGEKKMSKSLGNYIGVTD 239

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATEIT 307
              +P   +    +I D  +  +   L+  P++EI ++ +    GK   + K ++A EI 
Sbjct: 240 ---APSEMFGKIMSISDDLMWDWYNLLSFRPLTEIIQLKEDVANGKNPRDVKILLAKEII 296

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
              H   +A+ A    +  F        MP  +   +     +GL  L+  AG   ST+E
Sbjct: 297 ARFHSEADADTAEQEFINRFQKGAMPDDMPEFTFEGE-----IGLANLLKDAGLVASTSE 351

Query: 368 ARRHLKSNAIKINNSIISNEKLQI 391
           A R ++   +KI+   + + KL I
Sbjct: 352 ANRMVQQGGVKIDGEKVDDAKLII 375


>gi|15615790|ref|NP_244094.1| tyrosyl-tRNA synthetase [Bacillus halodurans C-125]
 gi|81785909|sp|Q9K7X9|SYY_BACHD RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|10175851|dbj|BAB06947.1| tyrosyl-tRNA synthetase [Bacillus halodurans C-125]
          Length = 412

 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 100/361 (27%), Positives = 177/361 (49%), Gaps = 21/361 (5%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D +A  +H GH   L  L   Q  GH+   L+G  T  IGDPS + E+R+ +  +++
Sbjct: 52  LGMDPSAPDVHIGHTVVLHKLRQFQDLGHEVQMLIGDFTGRIGDPSGKSETRKQLTDEQV 111

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           + N       +   +        A +  N  WL ++ + D+++ + S  +V RML  +  
Sbjct: 112 KANARTYVEQYGKILDM----EKATLHYNSKWLSALNFEDVIK-LASQMTVARMLERDDF 166

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R K  Q +S  EF Y ++Q YD V L    +  +++GG+DQ  N++ G  L E     
Sbjct: 167 EKRYKSGQPISIHEFFYPLMQGYDSVAL----ESDIEIGGTDQKFNLLMGRMLQEAYGND 222

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
           K  A+T PL+    G  KM K+L+  I +++   +P   +    +I D  +V + +  T 
Sbjct: 223 KQVAITMPLIEGLDGERKMSKSLNNYIGIDE---APNEIFGKAMSIPDELMVKYYELATD 279

Query: 279 LPMSEIDRMAK-LQGKEIN--EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQH 335
           L M E+  +AK L+   ++  +AK  +   +  M HG +EAE+A       F      + 
Sbjct: 280 LSMDEVKAIAKGLEDGSVHPRDAKMKLGATLVRMYHGEKEAEEAVN----YFKTVFQKRD 335

Query: 336 MPT-ISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
           +PT I   K +    + ++ L+V      S  EARR +++  +K+N   + + +LQ++++
Sbjct: 336 LPTDIPEVKWDGESPVWIVDLLVTLDLLPSKGEARRMVQNGGVKLNGEKVEDVQLQVEIE 395

Query: 395 D 395
           D
Sbjct: 396 D 396


>gi|223041527|ref|ZP_03611728.1| tyrosyl-tRNA synthetase [Actinobacillus minor 202]
 gi|223017622|gb|EEF16032.1| tyrosyl-tRNA synthetase [Actinobacillus minor 202]
          Length = 396

 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 102/382 (26%), Positives = 179/382 (46%), Gaps = 29/382 (7%)

Query: 10  SILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
            + SE   I ++   R L +          +G D TA  +H GH   L  L   Q  GH+
Sbjct: 18  DVYSEADLIEKLKENRPLRV---------KLGADPTAPDIHLGHTVVLNKLRQFQNFGHE 68

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
            I L+G  T+ +GDPS ++ +R  +  +++  N E  K       K    +   ++ N++
Sbjct: 69  VIFLIGDFTATVGDPSGKNATRPPLSREDVLRNAETYK---EQIYKILDPQKTRIVFNSD 125

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
            WL  +  + ++R + S ++V RML  +  + R    QS++  EF Y +LQ +D V L  
Sbjct: 126 -WLGELGTVGMIR-LASNYTVARMLERDDFKKRFANNQSIAIHEFIYPLLQGHDSVAL-- 181

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLN 248
             +  +++GG+DQ  N++ G +L +        A+T PLL    G  KM K+L   I + 
Sbjct: 182 --EADIELGGTDQTFNLLIGRELQKAAGXKPQVAMTLPLLVGLDGEKKMSKSLGNYIGVT 239

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM-AKLQ-GKEINEAKKIIATEI 306
           +   +P   +    +I D  +  +   L+  P++EI ++ A ++ GK   + K ++A EI
Sbjct: 240 E---APNEMFGKIMSISDELMWDWYNLLSFRPLTEIAQLKADVEAGKNPRDVKILLAKEI 296

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
               H   +A+ A    +  F        MP  +   +     +GL TL+ +AG   ST+
Sbjct: 297 IARFHSEADADAAEQEFINRFQKGAMPDEMPEFTFEGE-----IGLATLLKEAGLVPSTS 351

Query: 367 EARRHLKSNAIKINNSIISNEK 388
           EA R  +   +KI+   + + K
Sbjct: 352 EAIRSAQQGGVKIDGEKVDDVK 373


>gi|86150053|ref|ZP_01068281.1| tyrosyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CF93-6]
 gi|88596533|ref|ZP_01099770.1| tyrosyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 84-25]
 gi|218562883|ref|YP_002344662.1| tyrosyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni NCTC
           11168]
 gi|81549167|sp|Q9PN27|SYY_CAMJE RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|85839499|gb|EAQ56760.1| tyrosyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CF93-6]
 gi|88191374|gb|EAQ95346.1| tyrosyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 84-25]
 gi|112360589|emb|CAL35386.1| tyrosyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni NCTC
           11168]
 gi|284926496|gb|ADC28848.1| tyrosyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni IA3902]
 gi|315927103|gb|EFV06454.1| tyrosyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           DFVF1099]
 gi|315929604|gb|EFV08788.1| tyrosyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 305]
          Length = 401

 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 109/362 (30%), Positives = 181/362 (50%), Gaps = 24/362 (6%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   L  + +LQK G     L+G  T  IGDPS +  +R+ +  +++ 
Sbjct: 42  GFDPTAPDLHLGHSVVLTKMAFLQKHGAIVQFLIGDFTGQIGDPSGKSATRKKLDKEQVL 101

Query: 101 ENIEKIK-GIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
            N +  K  +F    K  T      +  N TWL  +    ++ E+ S FSV RML  +  
Sbjct: 102 INAKTYKTQVFKVLDKEKTQ-----IKFNSTWLNELGAAGIV-ELTSTFSVARMLERDDF 155

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R K +  +S  EF Y +LQ YD V L  +    ++MGG+DQ  N++ G  L       
Sbjct: 156 TKRFKEQSPISICEFLYPLLQGYDSVALKSD----IEMGGTDQKFNLLMGRQLQRVYNIG 211

Query: 220 KLFA-LTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT 277
           K  A +  PLL    G  KM K+L+  I + ++     + +    +I D  +  + + L+
Sbjct: 212 KEQAVIMMPLLEGLDGVNKMSKSLNNYIGVTEKAN---DMYAKILSISDELMFRYYELLS 268

Query: 278 TLPMSEIDRMAK--LQGK-EINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQ 334
              + EI ++ K   QG     +AK+ +A EIT   H +EEA  A +     FD  IHSQ
Sbjct: 269 QKSLEEIAQIKKDIEQGNLHPKKAKENLALEITERFHSKEEANNAKSE----FD-RIHSQ 323

Query: 335 HMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
           +     +++ E+   + L   +V+ G  +ST+ ARR + +NA+ +N+  +S+E++ ++  
Sbjct: 324 NALPSDMAEFEIQGKIWLAKALVECGLESSTSAARRSISANAVSVNSQKVSDEQMYLEQG 383

Query: 395 DF 396
           ++
Sbjct: 384 EY 385


>gi|307257546|ref|ZP_07539309.1| Tyrosyl-tRNA synthetase 2 [Actinobacillus pleuropneumoniae serovar
           10 str. D13039]
 gi|306863947|gb|EFM95867.1| Tyrosyl-tRNA synthetase 2 [Actinobacillus pleuropneumoniae serovar
           10 str. D13039]
          Length = 396

 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 102/380 (26%), Positives = 175/380 (46%), Gaps = 29/380 (7%)

Query: 10  SILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
           +I SE   I ++   R L I          +G D TA  +H GH   L  L   Q+ GH+
Sbjct: 18  NIYSEEDLIEKLKENRPLRI---------KLGADPTAPDIHLGHTVVLNKLRQFQQLGHE 68

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
            I L+G  T ++GDPS ++ +R  +  +++  N E  K       K        ++ N+E
Sbjct: 69  VIFLIGDFTGMVGDPSGKNSTRPPLTREDVLRNAETYK---QQLFKILDPNKTRVVFNSE 125

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
            WL  +    ++R + S ++V RML  +  + R    QS++  EF Y +LQ +D V L  
Sbjct: 126 -WLGKLGTEGMIR-LASNYTVARMLERDDFKKRFTNNQSIAIHEFIYPLLQGHDSVAL-- 181

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLN 248
             +  +++GG+DQ  N++ G +L +        A+T PLL    G  KM K+L   I + 
Sbjct: 182 --EADVELGGTDQTFNLLVGRELQKSAGQKPQVAMTLPLLVGLDGEKKMSKSLGNYIGVT 239

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATEI 306
               +P + +    +I D  +  +   L+  P+ EI ++     +GK   + K ++A E+
Sbjct: 240 ---DAPSDMFGKVMSISDELMWDWYNLLSFRPLDEIAQLKANVAEGKNPRDVKILLAKEL 296

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
               H +  A+ A    +  F        MP  +   +     +GL TL+ +AG   ST+
Sbjct: 297 IARFHDQAAADSAEQEFINRFQKGAIPDEMPEFTFEGE-----IGLATLLKEAGLVASTS 351

Query: 367 EARRHLKSNAIKINNSIISN 386
           EA R  +   +KI+   + +
Sbjct: 352 EAIRSAQQGGVKIDGEKVED 371


>gi|46143699|ref|ZP_00134668.2| COG0162: Tyrosyl-tRNA synthetase [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|126208940|ref|YP_001054165.1| tyrosyl-tRNA synthetase [Actinobacillus pleuropneumoniae L20]
 gi|126097732|gb|ABN74560.1| tyrosyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 5b
           str. L20]
          Length = 396

 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 102/380 (26%), Positives = 175/380 (46%), Gaps = 29/380 (7%)

Query: 10  SILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
           +I SE   I ++   R L I          +G D TA  +H GH   L  L   Q+ GH+
Sbjct: 18  NIYSEEDLIEKLKENRPLRI---------KLGADPTAPDIHLGHTVVLNKLRQFQQLGHE 68

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
            I L+G  T ++GDPS ++ +R  +  +++  N E  K       K        ++ N+E
Sbjct: 69  VIFLIGDFTGMVGDPSGKNSTRPPLTREDVLRNAETYK---QQLFKILDPNKTRVVFNSE 125

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
            WL  +    ++R + S ++V RML  +  + R    QS++  EF Y +LQ +D V L  
Sbjct: 126 -WLGKLGTEGMIR-LASNYTVARMLERDDFKKRFTNNQSIAIHEFIYPLLQGHDSVAL-- 181

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLN 248
             +  +++GG+DQ  N++ G +L +        A+T PLL    G  KM K+L   I + 
Sbjct: 182 --EADVELGGTDQTFNLLVGRELQKSAGQKPQVAMTLPLLVGLDGEKKMSKSLGNYIGVT 239

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATEI 306
               +P + +    +I D  +  +   L+  P+ EI ++     +GK   + K ++A E+
Sbjct: 240 ---DAPSDMFGKVMSISDELMWDWYNLLSFRPLDEIAQLKADVAEGKNPRDVKILLAKEL 296

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
               H +  A+ A    +  F        MP  +   +     +GL TL+ +AG   ST+
Sbjct: 297 IARFHDQAAADSAEQEFINRFQKGAIPDEMPEFTFEGE-----IGLATLLKEAGLVASTS 351

Query: 367 EARRHLKSNAIKINNSIISN 386
           EA R  +   +KI+   + +
Sbjct: 352 EAIRSAQQGGVKIDGEKVED 371


>gi|317178865|dbj|BAJ56653.1| tyrosyl-tRNA synthetase [Helicobacter pylori F30]
          Length = 402

 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 106/377 (28%), Positives = 178/377 (47%), Gaps = 34/377 (9%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   +  L  LQ+ G +   L+G  T++IGDP+ ++E+R+ +  +++ 
Sbjct: 44  GFDPTAPDLHLGHTVLIQKLALLQQYGARVKFLIGDFTAMIGDPTGKNETRKPLNREQVL 103

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           EN +     +   I     +    +  N TWL ++    ++ E+ + FSV RML  +   
Sbjct: 104 ENAK----TYEEQIYKILDQKHTEVCFNSTWLDTLGTKGII-ELCAKFSVARMLERDDFT 158

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R K  + +S +EF Y +LQ YD V +    D  +++GG+DQ  N++ G  L       K
Sbjct: 159 KRYKENRPISIVEFLYPLLQGYDSVAM----DADIELGGNDQKFNLLVGRFLQRAYGLNK 214

Query: 221 -LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               +T PLL    G  KM K+L   + + +E   P   +    ++ D  +  +   L+ 
Sbjct: 215 EQSVITMPLLEGLDGVQKMSKSLGNYVGITEE---PNAMFGKIMSVSDDLMWRYYTLLSA 271

Query: 279 LPMSEIDRMAK------LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIH 332
             + EI+ +        L  K + E    +A EI    +  E+A KA     E F     
Sbjct: 272 KTLEEIEDLKHGILNQTLHPKAVKED---LAGEIVARYYDNEQAIKAK----EQFSKVFS 324

Query: 333 SQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
           +  +P I +  D    G+G+L ++ + GF  ST++ARR ++   +KIN  +I NE  +  
Sbjct: 325 ANLLPEILLESD-FDEGVGILDVLKQIGFCPSTSQARRDIQGGGVKINQKVIKNESYRF- 382

Query: 393 LQDFDSTGNIKLSFGKK 409
                  GN  +  GKK
Sbjct: 383 -----VKGNYVIQLGKK 394


>gi|116328275|ref|YP_797995.1| tyrosyl-tRNA synthetase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116331000|ref|YP_800718.1| tyrosyl-tRNA synthetase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
 gi|116121019|gb|ABJ79062.1| Tyrosine--tRNA ligase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116124689|gb|ABJ75960.1| Tyrosine--tRNA ligase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
          Length = 405

 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 107/389 (27%), Positives = 182/389 (46%), Gaps = 26/389 (6%)

Query: 15  RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLM 74
           RG +  IS       L  +  +    G+D TA  LH GH  QL  L   Q  GH+   L+
Sbjct: 12  RGTVDLISEDELKSKLQKKKALKIKAGFDPTAPDLHLGHFVQLKKLKHFQDLGHEVFFLL 71

Query: 75  GGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCS 134
           G  T++IGDP+ + E+R+ +  +E+ EN +  +     F      KT   ++ N +W   
Sbjct: 72  GDFTAMIGDPTGKSETRKRLSKEEVLENSKTYQS--QVFKVLDPAKTR--IVYNSSWCSG 127

Query: 135 IKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCR 194
           + + D+L  + S ++V RML  +    R K    +S +EF Y ++Q YD V +    +C 
Sbjct: 128 MNFEDVLV-LSSKYNVARMLERDDFNKRYKAGHPISMIEFLYPLVQGYDSVAM----ECD 182

Query: 195 LQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTS 253
           +++GG+DQ  N++ G DL           LT PLL    G  KM K+L   + + +    
Sbjct: 183 VELGGTDQKFNLLVGRDLQREYGKEVQCVLTLPLLVGLDGNKKMSKSLGNYVGITE---V 239

Query: 254 PYNFWQYWRNIDDADVVSFAKRLTTLPMSEID-RMAKLQGKEINEAKKIIATEITTMVHG 312
           P + +    +I D  + ++ + LT LP+SEI+ R   +  KE++   K +  E+  ++  
Sbjct: 240 PIDMFGKLMSISDDLMWNYFELLTDLPLSEIEVRKNGIVNKELH--PKEVKIELAKLIMD 297

Query: 313 REEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMG---------LLTLIVKAGFAT 363
           +  +      A+E +   IH+     I     EV  G           L+ ++ K  F  
Sbjct: 298 QLSSPSENEEAIEEWK-KIHNPKSRAIPDDIREVKLGEEFFSETPEPLLVWVLSKLSFVP 356

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIK 392
           S +E RR +K+  + +    I++EK  I+
Sbjct: 357 SVSEGRRLIKAGGLYLFEDKITDEKFAIQ 385


>gi|238019117|ref|ZP_04599543.1| hypothetical protein VEIDISOL_00979 [Veillonella dispar ATCC 17748]
 gi|237863816|gb|EEP65106.1| hypothetical protein VEIDISOL_00979 [Veillonella dispar ATCC 17748]
          Length = 402

 Score =  126 bits (316), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 101/358 (28%), Positives = 171/358 (47%), Gaps = 20/358 (5%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  L   Q+ GH+ + ++GG T+ IGDP+ +  +R  +  +E+
Sbjct: 42  LGLDPTAPDIHLGHTVPLRKLRLFQEFGHQVVIVIGGFTARIGDPTGKSVTRPPLTKEEV 101

Query: 100 QENIEKIK-GIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
            +N E  K  IF       T     ++ +N  WL S+ + D+LR + S ++V RM+  + 
Sbjct: 102 LKNAETYKTQIFKVLDPEKT-----IVRDNSEWLESMNFADVLR-LASSYTVARMMERDD 155

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
              R K  +++   EF Y ++Q  D V L  +    ++ GG+DQ  N++ G  L E    
Sbjct: 156 FNKRFKEGRAIGVHEFMYPLMQGQDSVALHAD----VEFGGTDQTFNLLMGRHLQELEGQ 211

Query: 219 PKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT 277
                +T PLL    G  KM K+L   I +++E   P   +    +I D  ++ +   +T
Sbjct: 212 EPQVVITMPLLEGLDGVQKMSKSLGNYIGIDEE---PKEMYGKAMSIPDELMMRYFMLVT 268

Query: 278 TLPMSEIDRMAK-LQGKEIN--EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQ 334
            +P+ E + M K L+  E++  +AK  +A  I  + HG E A +A       F       
Sbjct: 269 DMPIEEQEDMEKRLESGELHPRDAKMQLARTIVRLYHGEEAALEAEEEFKRVFQQRALPT 328

Query: 335 HMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
            +P  ++  D  +  + +      AG   S  EARR +K+ A K+N    + E L ++
Sbjct: 329 DIPECAM--DAPTEPIFVPQFCTDAGLTASNGEARRSIKAGAFKVNGEKYTEENLTLE 384


>gi|17545215|ref|NP_518617.1| tyrosyl-tRNA synthetase [Ralstonia solanacearum GMI1000]
 gi|81506509|sp|Q8Y240|SYY_RALSO RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|17427506|emb|CAD14024.1| probable tyrosyl-trna synthetase protein [Ralstonia solanacearum
           GMI1000]
          Length = 392

 Score =  126 bits (316), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 101/363 (27%), Positives = 178/363 (49%), Gaps = 26/363 (7%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  +  LQ  GH+ I L+G  TS IGDPS R+ +R  +  ++I
Sbjct: 35  LGLDPTAPDIHIGHTVVLNKMRQLQDLGHQVIFLIGDFTSTIGDPSGRNATRPPLTREQI 94

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           + N +      S  +     KT+  +  N  W C       + ++ + ++V RM+  +  
Sbjct: 95  EANAQTYYRQASMVLD--PSKTE--IRYNSEW-CDPLGARGIIQLAAKYTVARMMERDDF 149

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R K    +S  EF Y ++Q YD V L  +    L++GG+DQ  N++ G +L +     
Sbjct: 150 TKRYKAGVPISVHEFLYPLMQGYDSVALKSD----LELGGTDQKFNLLVGRELQKEYGQE 205

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               LT PLL    G  KM K+    + +++   +P   +    +I D  + ++   L+ 
Sbjct: 206 PQCILTMPLLVGLDGVEKMSKSKGNYVGISE---APNEMFGKLMSISDDLMWTYYTLLSF 262

Query: 279 LPMSEIDRMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIH---S 333
            P++EID M +    G+   + K ++A EI    H + +AE+    A+E F+        
Sbjct: 263 RPLAEIDLMKQEVTLGRNPRDCKVLLAQEIIARFHSQADAER----ALEDFNHRARGGVP 318

Query: 334 QHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL 393
             +P I +S   +    G+  L+ +AG   ST+EA R+++   +KI+ ++IS++ L+++ 
Sbjct: 319 DDIPQIELSGAPI----GIAQLLKQAGLCPSTSEANRNIEQGGVKIDGTVISDKGLKVEA 374

Query: 394 QDF 396
             F
Sbjct: 375 GTF 377


>gi|300869063|ref|ZP_07113664.1| tyrosyl-tRNA synthetase [Oscillatoria sp. PCC 6506]
 gi|300332920|emb|CBN58860.1| tyrosyl-tRNA synthetase [Oscillatoria sp. PCC 6506]
          Length = 410

 Score =  126 bits (316), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 92/378 (24%), Positives = 181/378 (47%), Gaps = 28/378 (7%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D T + +H GH   +  L   Q  GH  + ++G  T+ IGDP+ + E+RR +  +++
Sbjct: 52  LGIDPTGADIHLGHSIPVRKLRAFQDAGHTAVLIIGDFTARIGDPTGKSEARRQLTPEDV 111

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
            +N +         + + T     +  N+E WL  +    +L E+ +  +V +ML+ E  
Sbjct: 112 AQNAQTYIDQVRPILDFDTPGRLEIRYNSE-WLSKLDLTKIL-ELLATMTVGQMLAKEGF 169

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
            +RL++   +   EF Y ++Q YD V +    +  +++GG+DQ  N+  G DL    +  
Sbjct: 170 DTRLEQGTPIYLHEFLYPLMQGYDSVAV----EADVELGGTDQKFNLAVGRDLQRHFRIR 225

Query: 220 KLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
             F + +P+L    G  KM K+L+  + L++    P   +Q  + + D  +  + + LT 
Sbjct: 226 PQFGMLTPILIGTDGIQKMSKSLNNYVGLSEH---PSLMYQKLQRVPDNLLEQYFELLTD 282

Query: 279 LPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDM-SIHSQHMP 337
           LP++E+         +  + ++++A ++    +  E A +A   AM      +  +  +P
Sbjct: 283 LPLNEL-------PPDPRQRQQLLAFDVVKQYYDEETAIQARQTAMTIGQGDTTQADAVP 335

Query: 338 TISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
             S+   EV     L  ++  +G   S+NEARR ++ N +K++   +S+  L      F+
Sbjct: 336 EFSVG--EVKFPAKLFYILSASGLCASSNEARRKIQENGVKLDGDRVSDVNLA-----FE 388

Query: 398 STGNIK---LSFGKKNHI 412
           S  +++   L  GK   +
Sbjct: 389 SPADLQDKVLQVGKNKFV 406


>gi|16329759|ref|NP_440487.1| tyrosyl-tRNA synthetase [Synechocystis sp. PCC 6803]
 gi|2501076|sp|P73141|SYY_SYNY3 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|1652244|dbj|BAA17167.1| tyrosyl tRNA synthetase [Synechocystis sp. PCC 6803]
          Length = 404

 Score =  126 bits (316), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 108/396 (27%), Positives = 188/396 (47%), Gaps = 25/396 (6%)

Query: 22  SNPRE-LDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTS 79
           +NP+E L IL  Q   +   +G D T + +H GH      L   Q  GH  + ++G  T+
Sbjct: 25  NNPQEHLGILTQQDRPLRVKLGIDPTGTDIHLGHSIPFRKLRAFQDAGHTAVVIIGDFTA 84

Query: 80  IIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYID 139
            IGDP+ + E R+ + + +++ N E         + + T     +  N+E WL ++    
Sbjct: 85  QIGDPTGKSEVRKQLTADQVKRNAESYLAQLKPILDFDTPGRLEIRYNSE-WLSNLDLNK 143

Query: 140 LLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGG 199
           +L E+ +  +V +ML+ E    R ++E  +   EF Y ++Q YD V  A N D  +++GG
Sbjct: 144 IL-ELLATMTVGQMLAKEGFAERFQKENPIFLHEFLYPLMQGYDSV--AVNAD--VELGG 198

Query: 200 SDQWGNIICGIDLGERL-KTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFW 258
           +DQ  NI  G DL     KTP+   L   LL T    KM K+L+  + L ++  S Y+  
Sbjct: 199 TDQKFNIAVGRDLQRHFGKTPQFGLLLPILLGTDGQQKMSKSLNNYVGLQEDALSMYSKL 258

Query: 259 QYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEK 318
           +      D  +  + + LT L ++E+    +       E +K++A E+T   HG   A  
Sbjct: 259 E---KTPDRLLGEYFELLTNLDLAELPENPR-------ECQKLLAKEVTAQFHGVAGAIA 308

Query: 319 AATAAMECFDM--SIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNA 376
           A   A +      + ++  +P  S++  E++  + L  L+  +G   S++E RR +K  A
Sbjct: 309 AQKTAEDIVTQGKAGNTDSVPEFSLA--EITFPVKLAYLLSASGLCPSSSEGRRQIKGGA 366

Query: 377 IKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           ++++   +  E +  +  D     N  L  GKK  I
Sbjct: 367 VRLDGDRL--EDVNQEYADPKMLINKVLQMGKKKFI 400


>gi|317009215|gb|ADU79795.1| tyrosyl-tRNA synthetase [Helicobacter pylori India7]
          Length = 402

 Score =  126 bits (316), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 105/377 (27%), Positives = 181/377 (48%), Gaps = 34/377 (9%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   +  L  LQ+ G +   L+G  T++IGDP+ ++E+R+ +  +++ 
Sbjct: 44  GFDPTAPDLHLGHTVLIQKLALLQQYGARVKFLIGDFTAMIGDPTGKNETRKPLNREQVL 103

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           EN +     +   I     +    +  N TWL ++    ++ E+ + FSV RML  +   
Sbjct: 104 ENAK----TYEEQIYKILDQKHTEVCFNSTWLDTLGAKGMI-ELCAKFSVARMLERDDFA 158

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R K  + +S +EF Y +LQ YD V +    D  +++GG+DQ  N++ G  L       K
Sbjct: 159 KRYKENRPISIVEFLYPLLQGYDSVAM----DADIELGGNDQKFNLLVGRFLQRAYGLNK 214

Query: 221 LFA-LTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
             + +T PLL    G  KM K+L   + + +E   P   +    ++ D  +  +   L+ 
Sbjct: 215 EQSIITMPLLEGLDGVQKMSKSLGNYVGITEE---PNAMFGKIMSVSDDLMWRYYTLLSA 271

Query: 279 LPMSEIDRMAK------LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIH 332
             + EI+ +        L  K + E    +A EI    +  ++A KA     E F     
Sbjct: 272 KTLEEIEDLKHGILNQTLHPKAVKED---LAGEIVARYYDNDQAFKAK----EQFSKVFS 324

Query: 333 SQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
           +  +P I +S+ +   G+G+L ++ + GF  ST++ARR ++   +KIN  +I NE  +  
Sbjct: 325 ANLLPEI-LSESDFDEGVGILDVLKQIGFCPSTSQARRDIQGGGVKINQEVIKNESYRF- 382

Query: 393 LQDFDSTGNIKLSFGKK 409
                  GN  +  GKK
Sbjct: 383 -----VKGNYVIQLGKK 394


>gi|300692496|ref|YP_003753491.1| tyrosyl-tRNA synthetase [Ralstonia solanacearum PSI07]
 gi|299079556|emb|CBJ52234.1| tyrosyl-tRNA synthetase [Ralstonia solanacearum PSI07]
          Length = 423

 Score =  126 bits (316), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 100/363 (27%), Positives = 179/363 (49%), Gaps = 26/363 (7%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  +  LQ  GH+ I L+G  TS IGDPS R+ +R  +  ++I
Sbjct: 66  LGLDPTAPDIHIGHTVVLNKMRQLQDLGHQVIFLIGDFTSTIGDPSGRNATRPPLTREQI 125

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           + N +      S  +     KT+  +  N  W   +    ++ ++ + ++V RM+  +  
Sbjct: 126 EANAQTYYRQASMVLD--PSKTE--IRYNSEWSDPLGARGMI-QLAAKYTVARMMERDDF 180

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R K    +S  EF Y ++Q YD V L  +    L++GG+DQ  N++ G +L +     
Sbjct: 181 TKRFKAGVPISVHEFLYPLMQGYDSVALKSD----LELGGTDQKFNLLVGRELQKEYGQE 236

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               LT PLL    G  KM K+    + +++   +P   +    +I D  + ++   L+ 
Sbjct: 237 PQCILTMPLLVGLDGVEKMSKSKGNYVGISE---APNEMFGKLMSISDDLMWTYYTLLSF 293

Query: 279 LPMSEIDRMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIH---S 333
            P++EID M +    G+   + K ++A EI    H + +AE+    A+E F+        
Sbjct: 294 RPLAEIDVMKEEIALGRNPRDCKVLLAQEIVARFHSQADAER----ALEDFNHRARGGVP 349

Query: 334 QHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL 393
             +P I +S   +    G+  L+ +AG   ST+EA R+++   +KI+ ++IS++ L+++ 
Sbjct: 350 DDIPQIELSGAPI----GIAQLLKQAGLCPSTSEANRNIEQGGVKIDGAVISDKGLKVEA 405

Query: 394 QDF 396
             F
Sbjct: 406 GTF 408


>gi|210134976|ref|YP_002301415.1| tyrosyl-tRNA synthetase [Helicobacter pylori P12]
 gi|210132944|gb|ACJ07935.1| tyrosyl-tRNA synthetase [Helicobacter pylori P12]
          Length = 402

 Score =  126 bits (316), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 105/377 (27%), Positives = 181/377 (48%), Gaps = 34/377 (9%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   +  L  LQ+ G +   L+G  T++IGDP+ ++E+R+ +  +++ 
Sbjct: 44  GFDPTAPDLHLGHTVLIQKLALLQQYGARVKFLIGDFTAMIGDPTGKNETRKPLNREQVL 103

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           EN +     +   I     +    +  N TWL ++    ++ E+ + FSV RML  +   
Sbjct: 104 ENAK----TYEEQIYKILDEKHTEVCFNSTWLDALGAKGMI-ELCAKFSVARMLERDDFT 158

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R K  + +S +EF Y +LQ YD V +    D  +++GG+DQ  N++ G  L       K
Sbjct: 159 KRYKENRPISIVEFLYPLLQGYDSVAM----DADIELGGNDQKFNLLVGRFLQRSYGLNK 214

Query: 221 -LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               +T PLL    G  KM K+L   + + +E   P   +    ++ D  +  +   L+T
Sbjct: 215 EQSVITMPLLEGLDGVQKMSKSLGNYVGITEE---PNAMFGKIMSVSDDLMWRYYTLLST 271

Query: 279 LPMSEIDRMAK------LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIH 332
             + EI+ +        L  K + E    +A EI    +  ++A KA     E F     
Sbjct: 272 KTLEEIEDLKHGILNQTLHPKAVKED---LAGEIVARYYDNDQAFKAK----EQFSKVFS 324

Query: 333 SQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
           +  +P I +S+ +   G+G+L ++ + GF  ST++ARR ++   +KIN  +I +E  +  
Sbjct: 325 ANLLPEI-LSESDFDEGVGILDVLKQIGFCPSTSQARRDIQGGGVKINQEVIKDESYRF- 382

Query: 393 LQDFDSTGNIKLSFGKK 409
                  GN  +  GKK
Sbjct: 383 -----VKGNYVIQLGKK 394


>gi|317177394|dbj|BAJ55183.1| tyrosyl-tRNA synthetase [Helicobacter pylori F16]
          Length = 402

 Score =  126 bits (316), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 105/377 (27%), Positives = 178/377 (47%), Gaps = 34/377 (9%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   +  L  LQ+ G +   L+G  T++IGDP+ ++E+R+ +  +++ 
Sbjct: 44  GFDPTAPDLHLGHTVLIQKLALLQQYGARVKFLIGDFTAMIGDPTGKNETRKPLNREQVL 103

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           EN +     +   I     +    +  N TWL ++    ++ E+ + FSV RML  +   
Sbjct: 104 ENAK----TYEEQIYKILDQKHTEVCFNSTWLDALGAKGII-ELCAKFSVARMLERDDFT 158

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R K  + +S +EF Y +LQ YD V +    D  +++GG+DQ  N++ G  L       K
Sbjct: 159 KRYKENRPISIVEFLYPLLQGYDSVAM----DADIELGGNDQKFNLLVGRFLQRAYGLNK 214

Query: 221 -LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               +T PLL    G  KM K+L   + + +E   P   +    ++ D  +  +   L+ 
Sbjct: 215 EQSVITMPLLEGLDGVQKMSKSLGNYVGITEE---PNAMFGKIMSVSDDLMWRYYTLLSA 271

Query: 279 LPMSEIDRMAK------LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIH 332
             + EI+ +        L  K + E    +A EI    +  E+A KA     E F     
Sbjct: 272 KTLEEIEDLKHGILNQTLHPKAVKED---LAGEIVARYYDNEQAIKAK----EQFSKVFS 324

Query: 333 SQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
           +  +P I +  D    G+G+L ++ + GF  ST++ARR ++   +KIN  ++ NE  +  
Sbjct: 325 ANLLPEILLESD-FDEGVGILDVLKQIGFCPSTSQARRDIQGGGVKINQEVVKNESYRF- 382

Query: 393 LQDFDSTGNIKLSFGKK 409
                  GN  +  GKK
Sbjct: 383 -----VKGNYVIQLGKK 394


>gi|317010991|gb|ADU84738.1| tyrosyl-tRNA synthetase [Helicobacter pylori SouthAfrica7]
          Length = 402

 Score =  126 bits (316), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 104/377 (27%), Positives = 181/377 (48%), Gaps = 34/377 (9%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   +  L  LQ+ G +   L+G  T++IGDP+ ++E+R+ +  +++ 
Sbjct: 44  GFDPTAPDLHLGHTVLIQKLALLQQYGARVKFLIGDFTAMIGDPTGKNETRKPLNREQVL 103

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           EN +     +   I     +    +  N TWL ++    ++ E+ + FSV RML  +   
Sbjct: 104 ENAK----TYEEQIYKILDQKHTEVCFNSTWLDALGAKGVV-ELCAKFSVARMLERDDFT 158

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R K  + +S +EF Y +LQ YD V +    D  +++GG+DQ  N++ G  L       K
Sbjct: 159 KRYKENRPISIVEFLYPLLQGYDSVAM----DADIELGGNDQKFNLLVGRFLQRAYGLNK 214

Query: 221 -LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               +T PLL    G  KM K+L   + + +E   P   +    ++ D  +  +   L+ 
Sbjct: 215 EQSVITMPLLEGLDGVQKMSKSLGNYVGITEE---PNAMFGKLMSVSDDLMWRYYTLLSA 271

Query: 279 LPMSEIDRMAK------LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIH 332
             + EI+ +        L  K + E    +A+EI    +  ++A KA     E F     
Sbjct: 272 KTLEEIEDLKHGILNQTLHPKAVKED---LASEIVARYYDNDQAIKAK----EQFSKVFS 324

Query: 333 SQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
           +  +P I +S+ +   G+G+L ++ + GF  ST++ARR ++   ++IN  +I NE  +  
Sbjct: 325 ANLLPEI-LSESDFDEGVGILDVLKQIGFCPSTSQARRDIQGGGVRINQEVIKNESYRF- 382

Query: 393 LQDFDSTGNIKLSFGKK 409
                  GN  +  GKK
Sbjct: 383 -----VKGNYVIQLGKK 394


>gi|320583069|gb|EFW97285.1| de-n-glycosylation protein, putative [Pichia angusta DL-1]
          Length = 475

 Score =  126 bits (316), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 72/199 (36%), Positives = 108/199 (54%), Gaps = 18/199 (9%)

Query: 58  MLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG 117
           M+L      GH   +L+GG T       F    RR   S+     +++  G         
Sbjct: 1   MVLLHFNLRGHSITALVGGATGTAQFEQFFRNGRRYAASR--NHVLDRPHG--------- 49

Query: 118 TGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYM 177
               +  + NN  W   + +++ L   G F  VN+MLS +S+RSRL  EQ + F EF Y 
Sbjct: 50  ----EVAVRNNYDWWKDMGFLEFLARYGRFIRVNQMLSRDSIRSRLDSEQGIGFNEFTYQ 105

Query: 178 ILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL---KTPKLFALTSPLLTTASG 234
           +LQAYDF  L KN+   +Q+GG+DQ+GNI+ G+DL +R+   +  K F +T PLLTTA+G
Sbjct: 106 LLQAYDFYYLNKNHGIDVQVGGNDQYGNIVAGLDLIDRMHPGEKKKAFGVTVPLLTTANG 165

Query: 235 TKMGKTLSGAIWLNKEMTS 253
            K GK+   A++++K +T 
Sbjct: 166 VKFGKSAGNAVFIDKNLTP 184


>gi|291614904|ref|YP_003525061.1| tyrosyl-tRNA synthetase [Sideroxydans lithotrophicus ES-1]
 gi|291585016|gb|ADE12674.1| tyrosyl-tRNA synthetase [Sideroxydans lithotrophicus ES-1]
          Length = 398

 Score =  126 bits (316), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 98/371 (26%), Positives = 174/371 (46%), Gaps = 18/371 (4%)

Query: 26  ELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDP 84
           ELD   ++G  +    G+D TA  LH GH   L  +  LQ  GH  + L+G  T +IGDP
Sbjct: 22  ELDKKLAEGRPLRIKAGFDPTAPDLHLGHTVLLNKMRQLQDLGHHALFLIGDFTGMIGDP 81

Query: 85  SFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREI 144
           + ++ +R  +  +++  N +  K     F      KT+ +   N  W+     +DL++ +
Sbjct: 82  TGKNATRPPLSREQVLANAQSYKD--QVFKVLDPNKTEVVF--NSAWMDKFSAVDLIK-L 136

Query: 145 GSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWG 204
            +  +V +ML  +    R K  Q ++  EF Y ++Q YD V L  +    L++GG+DQ  
Sbjct: 137 AATHTVAQMLERDDFGKRYKASQPIAIHEFIYPLVQGYDSVALKAD----LELGGTDQKF 192

Query: 205 NIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
           N++ G +L      P    LT PLL    G  KM K+L   + +     +P + +    +
Sbjct: 193 NLLMGRELQRHFGQPAQCVLTMPLLEGLDGVNKMSKSLGNYVGIT---DTPQDMFGKLMS 249

Query: 264 IDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEITTMVHGREEAEKAAT 321
           I D  +  + + L+   +++I   R     G+   + K ++A EI    H ++ AE A  
Sbjct: 250 ISDDLMWRYLELLSFRSLAQIAHWRDEVNGGRNPRDIKVLLAQEIVARFHSQKAAEDALA 309

Query: 322 AAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINN 381
                F   +    MP +++    V   + +  L+ +A    ST+EA R +    +K++ 
Sbjct: 310 EFEARFQKGVLPDDMPELTVQ--SVDGSIAIANLLKQANLVASTSEALRMIDQGGVKLDG 367

Query: 382 SIISNEKLQIK 392
             +S++ LQ+K
Sbjct: 368 EKVSDKSLQLK 378


>gi|15894067|ref|NP_347416.1| tyrosyl-tRNA synthetase [Clostridium acetobutylicum ATCC 824]
 gi|81530926|sp|Q97KY6|SYY2_CLOAB RecName: Full=Tyrosyl-tRNA synthetase 2; AltName:
           Full=Tyrosine--tRNA ligase 2; Short=TyrRS 2
 gi|15023666|gb|AAK78756.1|AE007593_4 Tyrosyl-tRNA synthetase [Clostridium acetobutylicum ATCC 824]
 gi|325508194|gb|ADZ19830.1| tyrosyl-tRNA synthetase [Clostridium acetobutylicum EA 2018]
          Length = 400

 Score =  126 bits (316), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 107/370 (28%), Positives = 175/370 (47%), Gaps = 32/370 (8%)

Query: 36  VTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMR 95
           +   +G D +A  +H GH   L  L  LQ  GHK + ++G  T +IGDP+ + ++R+ + 
Sbjct: 38  LVVKLGLDPSAPDIHLGHAVVLRKLKQLQDLGHKIVIIIGDFTGMIGDPTGKSKTRKQLS 97

Query: 96  SQEIQENIEKI-KGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRML 154
           SQ++ +N E   K IF         KTD  +  N  WL  + + +++ E+ S ++V RML
Sbjct: 98  SQQVMKNAETYEKQIFKIL---DRNKTD--LRFNSQWLEKLNFKEVI-ELASKYTVARML 151

Query: 155 SFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
             E  + R K +QS+   EF Y ++QAYD + +  +    ++ GG+DQ  N++ G  L  
Sbjct: 152 EREDFKKRFKNQQSIGIHEFFYPLMQAYDSMAIKAD----IEFGGTDQRFNLLMGRTLQA 207

Query: 215 RLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFA 273
                K  A+  PLL    G  KM K+L   I + +   S  + +     I D+ ++ + 
Sbjct: 208 EYGEEKQIAIFMPLLEGIDGKEKMSKSLGNYIGIEE---SAKDMYVKVMQIPDSLIIKYF 264

Query: 274 KRLTTLPMSEIDRMAK-LQGKEIN--EAKKIIATEITTMVHGREEAEKAATAAMECFDMS 330
           +  T +    ID + K L   ++N  + K  +A EI  + H   EA  A       F   
Sbjct: 265 ELCTDMHPDAIDIIRKQLNEDKVNPRDIKMKLAKEIVCLYHNEAEALNAEIYFKNLFQDK 324

Query: 331 IHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKIN-------NSI 383
              + +P   +  +       L+  IVK    TS +EARR +    +K+N       N I
Sbjct: 325 EIPEDIPIFKVRSEN-----NLIEAIVKINSNTSKSEARRLIAQGGVKLNGRKVIDFNDI 379

Query: 384 I--SNEKLQI 391
           I  SN+ +QI
Sbjct: 380 ILKSNDVIQI 389


>gi|293390253|ref|ZP_06634587.1| tyrosyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D7S-1]
 gi|290950787|gb|EFE00906.1| tyrosyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D7S-1]
          Length = 395

 Score =  126 bits (316), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 102/384 (26%), Positives = 174/384 (45%), Gaps = 29/384 (7%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           ILSE+  I ++   R L +          +G D TA  +H GH   L  L   Q  GH+ 
Sbjct: 18  ILSEQDLIEKLKENRPLRV---------KLGADPTAPDIHLGHTVVLNKLRQFQNFGHEV 68

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           I L+G  T ++GDPS ++ +R  +  +++  N E  K      +     +    ++ N  
Sbjct: 69  IFLIGDFTGMVGDPSGKNTTRPPLSREDVLRNAETYKQQIYKILDPQKTR----IVFNSD 124

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           WL  +    ++R + S ++V RML  +  + R    Q ++  EF Y +LQ  D V L   
Sbjct: 125 WLGKLGTEGMIR-LASNYTVARMLERDDFKKRFSNNQPIAIHEFIYPLLQGQDSVAL--- 180

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNK 249
            +  +++GG+DQ  N++ G +L +        A+T PLL    G  KM K+L   I +  
Sbjct: 181 -EADVELGGTDQKFNLLVGRELQKSAGQKPQVAITLPLLVGLDGEKKMSKSLGNYIGVTD 239

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATEIT 307
              +P   +    +I D  +  +   L+  P++EI ++ +    GK   + K ++A EI 
Sbjct: 240 ---APSEMFGKIMSISDDLMWDWYNLLSFRPLTEIIQLKEDVANGKNPRDVKILLAKEII 296

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
              H   +A+ A    +  F        MP  +   +     +GL  L+  AG   ST+E
Sbjct: 297 ARFHSEADADTAEQEFINRFQKGAMPDDMPEFTFEGE-----IGLANLLKDAGLVASTSE 351

Query: 368 ARRHLKSNAIKINNSIISNEKLQI 391
           A R ++   +KI+   + + KL I
Sbjct: 352 ANRMVQQGGVKIDGEKVDDAKLII 375


>gi|332673421|gb|AEE70238.1| tyrosine--tRNA ligase [Helicobacter pylori 83]
          Length = 402

 Score =  126 bits (316), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 105/377 (27%), Positives = 179/377 (47%), Gaps = 34/377 (9%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   +  L  LQ+ G +   L+G  T++IGDP+ ++E+R+ +  +++ 
Sbjct: 44  GFDPTAPDLHLGHTVLIQKLALLQQYGARVKFLIGDFTAMIGDPTGKNETRKPLNREQVL 103

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           EN +     +   I     +    +  N TWL ++    ++ E+ + FSV RML  +   
Sbjct: 104 ENAK----TYEEQIYKILDEKHTEVCFNSTWLDTLGAKGMI-ELCAKFSVARMLERDDFA 158

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R K  + +S +EF Y +LQ YD V +    D  +++GG+DQ  N++ G  L       K
Sbjct: 159 KRYKENRPISIVEFLYPLLQGYDSVAM----DADIELGGNDQKFNLLVGRFLQRAYGLNK 214

Query: 221 -LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               +T PLL    G  KM K+L   + + +E   P   +    ++ D  +  +   L+ 
Sbjct: 215 EQSVITMPLLEGLDGVQKMSKSLGNYVGITEE---PNAMFGKIMSVSDDLMWRYYTLLSA 271

Query: 279 LPMSEIDRMAK------LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIH 332
             + EI+ +        L  K + E    +A EI    +  E+A KA     E F     
Sbjct: 272 KTLEEIEDLKHGILNQTLHPKAVKED---LAGEIVARYYDDEQAIKAK----EQFSKVFG 324

Query: 333 SQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
           +  +P I +  D    G+G+L ++ + GF +ST++ARR ++   +KIN  ++ NE  +  
Sbjct: 325 ANLLPEILLESD-FDEGVGILDVLKQIGFCSSTSQARRDIQGGGVKINQEVVKNESYRF- 382

Query: 393 LQDFDSTGNIKLSFGKK 409
                  GN  +  GKK
Sbjct: 383 -----VKGNYVIQLGKK 394


>gi|207742346|ref|YP_002258738.1| tyrosyl-trna synthetase protein [Ralstonia solanacearum IPO1609]
 gi|206593736|emb|CAQ60663.1| tyrosyl-trna synthetase protein [Ralstonia solanacearum IPO1609]
          Length = 433

 Score =  126 bits (316), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 101/363 (27%), Positives = 178/363 (49%), Gaps = 26/363 (7%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  +  LQ  GH+ I L+G  TS IGDPS R+ +R  +  ++I
Sbjct: 76  LGLDPTAPDIHIGHTVVLNKMRQLQDLGHQVIFLIGDFTSTIGDPSGRNATRPPLTREQI 135

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           + N +      S  +     KT+  +  N  W   +    ++ ++ + ++V RM+  +  
Sbjct: 136 EANAQTYYRQASMVLD--PSKTE--IRYNSEWSDPLGARGMI-QLAARYTVARMMERDDF 190

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R K    +S  EF Y ++Q YD V L  +    L++GG+DQ  N++ G +L +     
Sbjct: 191 TKRYKAGVPISVHEFLYPLMQGYDSVALKSD----LELGGTDQKFNLLVGRELQKEYGQE 246

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               LT PLL    G  KM K+    + + +    P   +    +I D  + ++   L+ 
Sbjct: 247 PQCILTMPLLVGLDGVEKMSKSKGNYVGIAE---VPGEMFGKLMSISDDLMWTYFTLLSF 303

Query: 279 LPMSEIDRMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIH---S 333
            PM+EI+RM +    G+   + K ++A EI    H + +AE+    A+E F+        
Sbjct: 304 RPMAEIERMKQEVALGRNPRDCKVLLAQEIIARFHSQADAER----ALEDFNHRARGGVP 359

Query: 334 QHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL 393
             +P I +S       +G+  L+ +AG   ST+EA R+++   +KI+ ++IS++ L+++ 
Sbjct: 360 DDIPQIELS----GAPLGIAQLLKQAGLCPSTSEANRNIEQGGVKIDGTVISDKGLKVEA 415

Query: 394 QDF 396
             F
Sbjct: 416 GTF 418


>gi|308063440|gb|ADO05327.1| tyrosyl-tRNA synthetase [Helicobacter pylori Sat464]
          Length = 402

 Score =  126 bits (316), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 105/377 (27%), Positives = 178/377 (47%), Gaps = 34/377 (9%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   +  L  LQ+ G +   L+G  T++IGDP+ ++E+R+ +  +++ 
Sbjct: 44  GFDPTAPDLHLGHTVLIQKLALLQQYGARVKFLIGDFTAMIGDPTGKNETRKPLNREQVL 103

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           EN +     +   I     +    +  N TWL ++    ++ E+ + FSV RML  +   
Sbjct: 104 ENAK----TYEEQIYKILDQKHTEVCFNSTWLDALGAKGII-ELCAKFSVARMLERDDFT 158

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R K  + +S +EF Y +LQ YD V +    D  +++GG+DQ  N++ G  L       K
Sbjct: 159 KRYKENRPISIVEFLYPLLQGYDSVAM----DADIELGGNDQKFNLLVGRFLQRAYGLNK 214

Query: 221 -LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               +T PLL    G  KM K+L   + + +E   P   +    ++ D  +  +   L+ 
Sbjct: 215 EQSVITMPLLEGLDGVQKMSKSLGNYVGITEE---PNAMFGKIMSVSDDLMWRYYTLLSA 271

Query: 279 LPMSEIDRMAK------LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIH 332
             + EI+ +        L  K + E    +A EI    +  E+A KA     E F     
Sbjct: 272 KTLEEIEDLKHGILNQTLHPKAVKED---LAGEIVARYYDNEQAIKAK----EQFSKVFG 324

Query: 333 SQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
           +  +P I +  D    G+G+L ++ + GF  ST++ARR ++   +KIN  ++ NE  +  
Sbjct: 325 ANLLPEILLESD-FDEGVGILDVLKQIGFCPSTSQARRDIQGGGVKINQEVVKNENYRF- 382

Query: 393 LQDFDSTGNIKLSFGKK 409
                  GN  +  GKK
Sbjct: 383 -----VKGNYVIQLGKK 394


>gi|261839409|gb|ACX99174.1| tyrosyl-tRNA synthetase [Helicobacter pylori 52]
          Length = 402

 Score =  126 bits (316), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 105/377 (27%), Positives = 178/377 (47%), Gaps = 34/377 (9%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   +  L  LQ+ G +   L+G  T++IGDP+ ++E+R+ +  +++ 
Sbjct: 44  GFDPTAPDLHLGHTVLIQKLALLQQYGARVKFLIGDFTAMIGDPTGKNETRKPLNREQVL 103

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           EN +     +   I     +    +  N TWL ++    ++ E+ + FSV RML  +   
Sbjct: 104 ENAK----TYEEQIYKILDQKHTEVCFNSTWLDALGAKGII-ELCAKFSVARMLERDDFT 158

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R K  + +S +EF Y +LQ YD V +    D  +++GG+DQ  N++ G  L       K
Sbjct: 159 KRYKENRPISIVEFLYPLLQGYDSVAM----DADIELGGNDQKFNLLVGRFLQRSYGLNK 214

Query: 221 -LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               +T PLL    G  KM K+L   + + +E   P   +    ++ D  +  +   L+ 
Sbjct: 215 EQSVITMPLLEGLDGVQKMSKSLGNYVGITEE---PNAMFGKIMSVSDDLMWRYYTLLSA 271

Query: 279 LPMSEIDRMAK------LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIH 332
             + EI+ +        L  K + E    +A EI    +  E+A KA     E F     
Sbjct: 272 KTLEEIEDLKHGILNQTLHPKAVKED---LAGEIVARYYDDEQAIKAK----EQFSKVFS 324

Query: 333 SQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
           +  +P I +  D    G+G+L ++ + GF  ST++ARR ++   +KIN  ++ NE  +  
Sbjct: 325 ANLLPEILLESD-FDEGVGILDVLKQIGFCPSTSQARRDIQGGGVKINQEVVKNESYRF- 382

Query: 393 LQDFDSTGNIKLSFGKK 409
                  GN  +  GKK
Sbjct: 383 -----VKGNYVIQLGKK 394


>gi|83749319|ref|ZP_00946316.1| Tyrosyl-tRNA synthetase tyrS [Ralstonia solanacearum UW551]
 gi|83723997|gb|EAP71178.1| Tyrosyl-tRNA synthetase tyrS [Ralstonia solanacearum UW551]
          Length = 392

 Score =  125 bits (315), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 101/363 (27%), Positives = 178/363 (49%), Gaps = 26/363 (7%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  +  LQ  GH+ I L+G  TS IGDPS R+ +R  +  ++I
Sbjct: 35  LGLDPTAPDIHIGHTVVLNKMRQLQDLGHQVIFLIGDFTSTIGDPSGRNATRPPLTREQI 94

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           + N +      S  +     KT+  +  N  W   +    ++ ++ + ++V RM+  +  
Sbjct: 95  EANAQTYYRQASMVLD--PSKTE--IRYNSEWSDPLGARGMI-QLAARYTVARMMERDDF 149

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R K    +S  EF Y ++Q YD V L  +    L++GG+DQ  N++ G +L +     
Sbjct: 150 TKRYKAGVPISVHEFLYPLMQGYDSVALKSD----LELGGTDQKFNLLVGRELQKEYGQE 205

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               LT PLL    G  KM K+    + + +    P   +    +I D  + ++   L+ 
Sbjct: 206 PQCILTMPLLVGLDGVEKMSKSKGNYVGIAE---VPGEMFGKLMSISDDLMWTYFTLLSF 262

Query: 279 LPMSEIDRMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIH---S 333
            PM+EI+RM +    G+   + K ++A EI    H + +AE+    A+E F+        
Sbjct: 263 RPMAEIERMKQEVALGRNPRDCKVLLAQEIIARFHSQADAER----ALEDFNHRARGGVP 318

Query: 334 QHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL 393
             +P I +S       +G+  L+ +AG   ST+EA R+++   +KI+ ++IS++ L+++ 
Sbjct: 319 DDIPQIELS----GAPLGIAQLLKQAGLCPSTSEANRNIEQGGVKIDGTVISDKGLKVEA 374

Query: 394 QDF 396
             F
Sbjct: 375 GTF 377


>gi|217032180|ref|ZP_03437679.1| hypothetical protein HPB128_186g46 [Helicobacter pylori B128]
 gi|298736478|ref|YP_003729004.1| tyrosyl-tRNA synthetase [Helicobacter pylori B8]
 gi|216946170|gb|EEC24779.1| hypothetical protein HPB128_186g46 [Helicobacter pylori B128]
 gi|298355668|emb|CBI66540.1| tyrosyl-tRNA synthetase [Helicobacter pylori B8]
          Length = 402

 Score =  125 bits (315), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 105/377 (27%), Positives = 181/377 (48%), Gaps = 34/377 (9%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   +  L  LQ+ G +   L+G  T++IGDP+ ++E+R+ +  +++ 
Sbjct: 44  GFDPTAPDLHLGHTVLIQKLALLQQYGARVKFLIGDFTAMIGDPTGKNETRKPLNREQVL 103

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           EN +     +   I     +    +  N TWL ++    ++ E+ + FSV RML  +   
Sbjct: 104 ENAK----TYEEQIYKILDEKHTEVCFNSTWLDALGAKGMI-ELCAKFSVARMLERDDFA 158

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R K  + +S +EF Y +LQ YD V +    D  +++GG+DQ  N++ G  L       K
Sbjct: 159 KRHKENRPISIVEFLYPLLQGYDSVAM----DADIELGGNDQKFNLLVGRFLQRAYGLNK 214

Query: 221 -LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               +T PLL    G  KM K+L   + + +E   P   +    ++ D  +  +   L+T
Sbjct: 215 EQSVITMPLLEGLDGVQKMSKSLGNYVGITEE---PNAMFGKIMSVSDDLMWRYYTLLST 271

Query: 279 LPMSEIDRMAK------LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIH 332
             + EI+ +        L  K + E    +A EI    +  ++A KA     E F     
Sbjct: 272 KTLEEIEDLKHGILNQTLHPKAVKEK---LAGEIVARYYDNDQAIKAK----EQFSKVFS 324

Query: 333 SQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
           +  +P I +S+ +   G+G+L ++ + GF  ST++ARR ++   +KIN  +I +E  +  
Sbjct: 325 ANLLPEI-LSESDFDEGVGILDVLKQIGFCPSTSQARRDIQGGGVKINQEVIKDESYRF- 382

Query: 393 LQDFDSTGNIKLSFGKK 409
                  GN  +  GKK
Sbjct: 383 -----VKGNYVIQLGKK 394


>gi|21673398|ref|NP_661463.1| tyrosyl-tRNA synthetase [Chlorobium tepidum TLS]
 gi|81791709|sp|Q8KEW9|SYY_CHLTE RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|21646497|gb|AAM71805.1| tyrosyl-tRNA synthetase [Chlorobium tepidum TLS]
          Length = 406

 Score =  125 bits (315), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 99/357 (27%), Positives = 168/357 (47%), Gaps = 17/357 (4%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D +   LH GH   L  L   Q  GH+ I ++G  T++IGDPS + ++R  + ++E 
Sbjct: 44  LGADPSRPDLHLGHSVVLRKLREFQDLGHEAILIIGDFTAMIGDPSGKSKTRPQLTAEEA 103

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           +EN    K  F    K    +   +  N + WL  + + D++R + S ++V RML  +  
Sbjct: 104 REN---GKSYFEQASKILDPEKTTICYNAD-WLSQMHFADVIR-LSSHYTVARMLERDDF 158

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R + +  +S  EF Y + Q  D V L  +    +++GG+DQ  N++ G DL       
Sbjct: 159 EKRYRSQTPISIHEFLYPLAQGMDSVHLKND----VELGGTDQKFNLLVGRDLQREYGIE 214

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               +T PLL    G+ KM K+L  AI  N    +P + +    +I D+ + ++   L  
Sbjct: 215 PQVCITMPLLVGTDGSEKMSKSLGNAICFND---TPEDMYGRTLSIPDSLIETYWNLLVP 271

Query: 279 LPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPT 338
                   +A+    +  E K+ +A E+    +  EEA K    A E FD  I ++  PT
Sbjct: 272 HHSGNDKPIAERIAADPRETKRELARELVAQYYSAEEAAK----AQEHFDRVIVNKQAPT 327

Query: 339 ISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
              + +     M ++ L++      S NEARR ++  A++  N  IS+    I+L +
Sbjct: 328 DLPTVEFEEATMPVVELLMALAAFPSKNEARRMIQQGAVQAGNEKISDINAVIELTE 384


>gi|114566637|ref|YP_753791.1| tyrosine--tRNA ligase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
 gi|114337572|gb|ABI68420.1| tyrosyl-tRNA synthetase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
          Length = 438

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 110/363 (30%), Positives = 171/363 (47%), Gaps = 34/363 (9%)

Query: 38  AYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQ 97
           A +G D TA  +H GH   L  L   Q  GH+   ++G  T  IGDPS + E+R+ +  +
Sbjct: 78  AKLGLDPTAPDIHLGHTVVLNKLRQFQDLGHEVHLIIGDFTGRIGDPSGKSETRKQLSEE 137

Query: 98  EI-------QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSV 150
           E+       QE I KI     +FI +           N +WL  +K  D+L   G  ++V
Sbjct: 138 EVMANAATYQEQIFKILDREKTFIHF-----------NSSWLMQLKLADVLNLAGK-YTV 185

Query: 151 NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGI 210
            RML  +    R +    +   EF Y ++QAYD VEL  +    +++GG+DQ  N++ G 
Sbjct: 186 ARMLERDDFSKRYREGLPIGIHEFMYPLMQAYDSVELRAD----VELGGTDQKFNLLVGR 241

Query: 211 DLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADV 269
           +L          ALT P+L    G  KM K+L   I +N+E    Y  +    +I D  +
Sbjct: 242 NLLREYGQEPQVALTMPILEGTDGVQKMSKSLGNYIGVNEE---AYEMFGKTMSIPDELI 298

Query: 270 VSFAKRLTTLPMSEIDRMAK-LQGKEIN--EAKKIIATEITTMVHGREEAEKAATAAMEC 326
             + + LT +PM++I  + + +   ++N  +AK  +A EI  + H  EEAEKA       
Sbjct: 299 ARYFELLTRVPMNDIQGLQEDMNSGKLNPRDAKIRLAKEIIKIYHNEEEAEKAEEKFRLV 358

Query: 327 FDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISN 386
           F      + +P I+ S+ EV     L   +       ST++ RR +K  A+K+N      
Sbjct: 359 FSQRDIPEDIPVITSSEREV----WLPKFLHDNSMVNSTSDGRRMIKQGAVKVNGEKYQE 414

Query: 387 EKL 389
           E L
Sbjct: 415 ENL 417


>gi|261837994|gb|ACX97760.1| tyrosyl-tRNA synthetase [Helicobacter pylori 51]
          Length = 402

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 105/377 (27%), Positives = 179/377 (47%), Gaps = 34/377 (9%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   +  L  LQ+ G +   L+G  T++IGDP+ ++E+R+ +  +++ 
Sbjct: 44  GFDPTAPDLHLGHTVLIQKLALLQQYGARVKFLIGDFTAMIGDPTGKNETRKPLNREQVL 103

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           EN +     +   I     +    +  N TWL ++    ++ E+ + FSV RML  +   
Sbjct: 104 ENAK----TYEEQIYKILDQKHTEVCFNSTWLDALGAKGII-ELCAKFSVARMLERDDFT 158

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R K  + +S +EF Y +LQ YD V +    D  +++GG+DQ  N++ G  L       K
Sbjct: 159 KRYKENRPISIVEFLYPLLQGYDSVAM----DADIELGGNDQKFNLLVGRFLQRAYGLNK 214

Query: 221 LFA-LTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
             + +T PLL    G  KM K+L   + + +E   P   +    ++ D  +  +   L+ 
Sbjct: 215 EQSIITMPLLEGLDGVQKMSKSLGNYVGITEE---PNAMFGKIMSVSDELMWRYYTLLSA 271

Query: 279 LPMSEIDRMAK------LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIH 332
             + EI+ +        L  K + E    +A EI    +  E+A KA     E F     
Sbjct: 272 KTLEEIEDLKHGILNQTLHPKAVKED---LAGEIVARYYDDEQAIKAK----EQFSKVFS 324

Query: 333 SQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
           +  +P I +  D    G+G+L ++ + GF  ST++ARR ++   +KIN  ++ NE  +  
Sbjct: 325 ANLLPEILLESD-FDEGVGILDVLKQIGFCPSTSQARRDIQGGGVKINQEVVKNESYRF- 382

Query: 393 LQDFDSTGNIKLSFGKK 409
                  GN  +  GKK
Sbjct: 383 -----VKGNYVIQLGKK 394


>gi|299067944|emb|CBJ39158.1| tyrosyl-tRNA synthetase [Ralstonia solanacearum CMR15]
          Length = 423

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 101/363 (27%), Positives = 177/363 (48%), Gaps = 26/363 (7%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  +  LQ  GH+ I L+G  TS IGDPS R+ +R  +  ++I
Sbjct: 66  LGLDPTAPDIHIGHTVVLNKMRQLQDLGHQVIFLIGDFTSTIGDPSGRNATRPPLTREQI 125

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           + N +      S  +     KT+  +  N  W C       + ++ + ++V RM+  +  
Sbjct: 126 EANAQTYYRQASMVLD--PSKTE--IRYNSEW-CDPLGARGIIQLAAKYTVARMMERDDF 180

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R K    +S  EF Y ++Q YD V L  +    L++GG+DQ  N++ G +L +     
Sbjct: 181 TKRYKAGVPISVHEFLYPLMQGYDSVALKSD----LELGGTDQKFNLLVGRELQKEYGQE 236

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               LT PLL    G  KM K+    + +++   +P   +    +I D  + ++   L+ 
Sbjct: 237 PQCILTMPLLVGLDGVEKMSKSKGNYVGISE---APNEMFGKLMSISDDLMWTYYTLLSF 293

Query: 279 LPMSEIDRMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIH---S 333
            P++EID M +    G+   + K ++A EI    H   +AE+    A+E F+        
Sbjct: 294 RPLAEIDLMKEEIALGRNPRDCKVLLAQEIIARFHSPADAER----ALEDFNHRARGGVP 349

Query: 334 QHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL 393
             +P I +S       +G+  L+ +AG   ST+EA R+++   +KI+ ++IS++ L+++ 
Sbjct: 350 DDIPQIELS----GAPLGIAQLLKQAGLCPSTSEANRNIEQGGVKIDGTVISDKGLKVEA 405

Query: 394 QDF 396
             F
Sbjct: 406 GTF 408


>gi|121613329|ref|YP_001000947.1| tyrosyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81-176]
 gi|167005857|ref|ZP_02271615.1| tyrosyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81-176]
 gi|87249722|gb|EAQ72681.1| tyrosyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81-176]
          Length = 401

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 106/361 (29%), Positives = 180/361 (49%), Gaps = 22/361 (6%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   L  + +LQK G     L+G  T  IGDPS +  +R+ +  +++ 
Sbjct: 42  GFDPTAPDLHLGHSVVLTKMAFLQKHGAIVQFLIGDFTGQIGDPSGKSATRKKLDKEQVL 101

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
            N +     + + +     K    +  N TWL  +    ++ E+ S FSV RML  +   
Sbjct: 102 INAK----TYETQVFKVLDKEKTQIKFNSTWLNELGAAGIV-ELTSTFSVARMLERDDFT 156

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R K +  +S  EF Y +LQ YD V L  +    ++MGG+DQ  N++ G  L       K
Sbjct: 157 KRFKEQSPISICEFLYPLLQGYDSVALKSD----IEMGGTDQKFNLLMGRQLQRVYNIGK 212

Query: 221 LFA-LTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
             A +  PLL    G  KM K+L+  I + ++     + +    +I D  +  + + L+ 
Sbjct: 213 EQAVIMMPLLEGLDGVNKMSKSLNNYIGVTEKAN---DMYAKILSISDELMFRYYELLSQ 269

Query: 279 LPMSEIDRMAK--LQGK-EINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQH 335
             + EI ++ K   QG     +AK+ +A EIT   H +EEA  A +     FD  IHSQ+
Sbjct: 270 KSLEEIAQIKKDIEQGNLHPKKAKENLALEITEHFHSKEEANNAKSE----FD-RIHSQN 324

Query: 336 MPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
                +++ E+   + L   +V+ G  +ST+ ARR + +NA+ +N+  +S+E++ ++  +
Sbjct: 325 ALPSDMAEFEIQGKIWLAKALVECGLESSTSAARRSISANAVSVNSQKVSDEQMHLEQGE 384

Query: 396 F 396
           +
Sbjct: 385 Y 385


>gi|190150753|ref|YP_001969278.1| tyrosyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 7
           str. AP76]
 gi|307264155|ref|ZP_07545749.1| Tyrosyl-tRNA synthetase 2 [Actinobacillus pleuropneumoniae serovar
           13 str. N273]
 gi|189915884|gb|ACE62136.1| tyrosyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 7
           str. AP76]
 gi|306870529|gb|EFN02279.1| Tyrosyl-tRNA synthetase 2 [Actinobacillus pleuropneumoniae serovar
           13 str. N273]
          Length = 396

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 102/380 (26%), Positives = 175/380 (46%), Gaps = 29/380 (7%)

Query: 10  SILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
           +I SE   I ++   R L I          +G D TA  +H GH   L  L   Q+ GH+
Sbjct: 18  NIYSEEDLIEKLKENRPLRI---------KLGADPTAPDIHLGHTVVLNKLRQFQQLGHE 68

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
            I L+G  T ++GDPS ++ +R  +  +++  N E  K       K        ++ N+E
Sbjct: 69  VIFLIGDFTGMVGDPSGKNSTRPPLTREDVLRNAETYK---QQLFKILDPNKTRVVFNSE 125

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
            WL  +    ++R + S ++V RML  +  + R    QS++  EF Y +LQ +D V L  
Sbjct: 126 -WLGKLGTEGMIR-LASNYTVARMLERDDFKKRFTNNQSIAIHEFIYPLLQGHDSVAL-- 181

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLN 248
             +  +++GG+DQ  N++ G +L +        A+T PLL    G  KM K+L   I + 
Sbjct: 182 --EADVELGGTDQTFNLLVGRELQKSAGQKPQVAMTLPLLVGLDGEKKMSKSLGNYIGVT 239

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATEI 306
               +P + +    +I D  +  +   L+  P+ EI ++     +GK   + K ++A E+
Sbjct: 240 D---APSDMFGKVMSISDELMWDWYNLLSFRPLDEIAQLKANVAEGKNPRDVKILLAKEL 296

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
               H +  A+ A    +  F        MP  +   +     +GL TL+ +AG   ST+
Sbjct: 297 IARFHDQVAADSAEQEFINRFQKGAIPDEMPEFTFEGE-----IGLATLLKEAGLVASTS 351

Query: 367 EARRHLKSNAIKINNSIISN 386
           EA R  +   +KI+   + +
Sbjct: 352 EAIRSAQQGGVKIDGEKVED 371


>gi|317012585|gb|ADU83193.1| tyrosyl-tRNA synthetase [Helicobacter pylori Lithuania75]
          Length = 402

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 104/377 (27%), Positives = 181/377 (48%), Gaps = 34/377 (9%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   +  L  LQ+ G +   L+G  T++IGDP+ ++E+R+ +  +++ 
Sbjct: 44  GFDPTAPDLHLGHTVLIQKLALLQQYGARVKFLIGDFTAMIGDPTGKNETRKPLNREQVL 103

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           EN +     +   I     +    +  N TWL ++    ++ E+ + FSV RML  +   
Sbjct: 104 ENAK----TYEEQIYKILDQKHTEVCFNSTWLDTLGTKGMI-ELCAKFSVARMLERDDFA 158

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R K  + +S +EF Y +LQ YD V +    D  +++GG+DQ  N++ G  L       K
Sbjct: 159 KRYKENRPISIVEFLYPLLQGYDSVAM----DADIELGGNDQKFNLLVGRFLQRAYGLNK 214

Query: 221 -LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               +T PLL    G  KM K+L   + + +E   P   +    ++ D  +  +   L+ 
Sbjct: 215 EQSVITMPLLEGLDGVQKMSKSLGNYVGITEE---PNAMFGKIMSVSDDLMWRYYTLLSA 271

Query: 279 LPMSEIDRMAK------LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIH 332
             + EI+ +        L  K + E    +A+EI    +  ++A KA     E F     
Sbjct: 272 KTLEEIEDLKHGILNQTLHPKAVKED---LASEIVARYYDNDQAFKAK----EQFSKVFS 324

Query: 333 SQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
           +  +P I +S+ +   G+G+L ++ + GF  ST++ARR ++   +KIN  +I +E  +  
Sbjct: 325 ANLLPEI-LSESDFDEGVGVLDVLKQIGFCPSTSQARRDIQGGGVKINQEVIKDESYRF- 382

Query: 393 LQDFDSTGNIKLSFGKK 409
                  GN  +  GKK
Sbjct: 383 -----VKGNYVIQLGKK 394


>gi|148263175|ref|YP_001229881.1| tyrosyl-tRNA synthetase [Geobacter uraniireducens Rf4]
 gi|146396675|gb|ABQ25308.1| tyrosyl-tRNA synthetase [Geobacter uraniireducens Rf4]
          Length = 403

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 97/357 (27%), Positives = 170/357 (47%), Gaps = 22/357 (6%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   L  +   Q+ GH+   L+G  T +IGDP+ + E+R+++  +++ 
Sbjct: 42  GFDPTAPDLHFGHTVLLHKMRQFQQLGHEIYFLIGDFTGMIGDPTGKSETRKVLTREDVL 101

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           +N E  K       K    +   ++ N+E WL  +   D++  + S ++V RML  E   
Sbjct: 102 KNAETYK---EQVFKILDPEKTKVVFNSE-WLGKLTASDMIG-LASKYTVARMLEREDFS 156

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
           +R   +  +S  EF Y ++Q YD V L  +    +++GG+DQ  N++ G +L      P 
Sbjct: 157 NRFSNQLPISIHEFMYPLVQGYDSVALKAD----VELGGTDQKFNLLVGRELQREWGQPP 212

Query: 221 LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTL 279
              +T PLL    G  KM K+L   I +N+        +    +I D  +  + + L+ +
Sbjct: 213 QTVITMPLLEGLDGVNKMSKSLGNYIGINEPADE---IFGKIMSISDELMFRYYELLSDM 269

Query: 280 PMSEIDRMA---KLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM 336
            ++E++++    K       E KK +  E+ +  HG     KAA  A   F        M
Sbjct: 270 SLAELEQLKGDLKNGAAHPMEVKKRLGREMVSRYHGN----KAADEAEANFVKRFRDNQM 325

Query: 337 PT--ISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
           P   ISI+       + L  ++  AG   S +E RR ++   +K+N   I+++ L++
Sbjct: 326 PDEMISITLSAAGEKILLGKVLAGAGLVKSNSEGRRAIQQGGVKVNGEKITDDNLEL 382


>gi|242309164|ref|ZP_04808319.1| tyrosyl-tRNA synthetase [Helicobacter pullorum MIT 98-5489]
 gi|239524205|gb|EEQ64071.1| tyrosyl-tRNA synthetase [Helicobacter pullorum MIT 98-5489]
          Length = 404

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 104/368 (28%), Positives = 174/368 (47%), Gaps = 36/368 (9%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   L  L   QK G +   L+G  T +IGDPS + E+R+ +  +++ 
Sbjct: 46  GFDPTAPDLHLGHTVLLQKLATFQKYGGRVYFLIGDFTGMIGDPSGKSETRKPLSKEQVL 105

Query: 101 ENI----EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSF 156
            N     E++  +  S        +   ++ N  WL  +    ++ E+ + FSV RML  
Sbjct: 106 ANAKTYQEQVTKVLDS--------SKMEIVFNSKWLDELGTRGMI-ELSAKFSVARMLER 156

Query: 157 ESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL 216
           +    R K +  +S +EF Y +LQ YD V L    DC ++ GG+DQ  N++ G  L    
Sbjct: 157 DDFEKRFKAQSPISIVEFFYPLLQGYDSVAL----DCDIECGGTDQKFNLLMGRHLQRAY 212

Query: 217 KTPKLFALT-SPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAK 274
              K  ++   PLL    G  KM K+L   + + +E   P   +    +I D+ +  + +
Sbjct: 213 GMSKEQSVVMVPLLEGLDGVNKMSKSLGNYVGITQE---PKEMFGRLLSISDSLMWRYYE 269

Query: 275 RLTTLPMSEIDRMAK------LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFD 328
            L+T  + EI  + +      L  K + E    +A EI T  + +E AE A    ++ F 
Sbjct: 270 LLSTKSLQEIAELKEGVEKGSLHPKAVKEN---LALEIITRYYNKESAEAAREEFIKVFS 326

Query: 329 MSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEK 388
                  MPT      E + G+ +  L+ +   +TS++EA R +K   +KIN   ++N K
Sbjct: 327 KDELPSDMPTF-----EKNAGIWIAQLMNECALSTSSSEALRLIKQGGVKINGERLTNTK 381

Query: 389 LQIKLQDF 396
           L ++  ++
Sbjct: 382 LNLEAGEY 389


>gi|86153123|ref|ZP_01071328.1| tyrosyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           HB93-13]
 gi|157415535|ref|YP_001482791.1| tyrosyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81116]
 gi|85844008|gb|EAQ61218.1| tyrosyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           HB93-13]
 gi|157386499|gb|ABV52814.1| tyrosyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81116]
 gi|307748175|gb|ADN91445.1| Tyrosyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni M1]
 gi|315932421|gb|EFV11364.1| tyrosyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 327]
          Length = 401

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 106/361 (29%), Positives = 180/361 (49%), Gaps = 22/361 (6%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   L  + +LQK G     L+G  T  IGDPS +  +R+ +  +++ 
Sbjct: 42  GFDPTAPDLHLGHSVVLTKMAFLQKHGAIVQFLIGDFTGQIGDPSGKSATRKKLDKEQVL 101

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
            N +     + + +     K    +  N TWL  +    ++ E+ S FSV RML  +   
Sbjct: 102 INAK----TYETQVFKVLDKEKTQIKFNSTWLNELGAAGIV-ELTSTFSVARMLERDDFT 156

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R K +  +S  EF Y +LQ YD V L  +    ++MGG+DQ  N++ G  L       K
Sbjct: 157 KRFKEQSPISICEFLYPLLQGYDSVALKSD----IEMGGTDQKFNLLMGRQLQRVYNIGK 212

Query: 221 LFA-LTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
             A +  PLL    G  KM K+L+  I + ++     + +    +I D  +  + + L+ 
Sbjct: 213 EQAVIMMPLLEGLDGVNKMSKSLNNYIGVTEKAN---DMYAKILSISDELMFRYYELLSQ 269

Query: 279 LPMSEIDRMAK--LQGK-EINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQH 335
             + EI ++ K   QG     +AK+ +A EIT   H +EEA  A +     FD  IHSQ+
Sbjct: 270 KSLEEIAQIKKDIEQGNLHPKKAKENLALEITERFHSKEEANNAKSE----FD-RIHSQN 324

Query: 336 MPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
                +++ E+   + L   +V+ G  +ST+ ARR + +NA+ +N+  +S+E++ ++  +
Sbjct: 325 ALPSDMAEFEIQGKIWLAKALVECGLESSTSAARRSISANAVSVNSQKVSDEQMHLEQGE 384

Query: 396 F 396
           +
Sbjct: 385 Y 385


>gi|317182086|dbj|BAJ59870.1| tyrosyl-tRNA synthetase [Helicobacter pylori F57]
          Length = 402

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 105/377 (27%), Positives = 179/377 (47%), Gaps = 34/377 (9%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   +  L  LQ+ G +   L+G  T++IGDP+ ++E+R+ +  +++ 
Sbjct: 44  GFDPTAPDLHLGHTVLIQKLALLQQYGARVKFLIGDFTAMIGDPTGKNETRKPLNREQVL 103

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           EN +     +   I     +    +  N TWL ++    ++ E+ + FSV RML  +   
Sbjct: 104 ENAK----TYEEQIYKILDQKHTEVCFNSTWLDALGAKGII-ELCAKFSVARMLERDDFT 158

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R K  + +S +EF Y +LQ YD V +    D  +++GG+DQ  N++ G  L       K
Sbjct: 159 KRYKENRPISIVEFLYPLLQGYDSVAM----DADIELGGNDQKFNLLVGRFLQRAYGLNK 214

Query: 221 LFA-LTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
             + +T PLL    G  KM K+L   + + +E   P   +    ++ D  +  +   L+ 
Sbjct: 215 EQSIITMPLLEGLDGVQKMSKSLGNYVGITEE---PNAMFGKIMSVSDDLMWRYYTLLSA 271

Query: 279 LPMSEIDRMAK------LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIH 332
             + EI+ +        L  K + E    +A EI    +  E+A KA     E F     
Sbjct: 272 KTLEEIEDLKHGILNQTLHPKAVKED---LAGEIVARYYDDEQAIKAK----EQFSKVFS 324

Query: 333 SQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
           +  +P I +  D    G+G+L ++ + GF  ST++ARR ++   +KIN  ++ NE  +  
Sbjct: 325 ANLLPEILLESD-FDEGVGILDVLKQIGFCPSTSQARRDIQGGGVKINQEVVKNESYRF- 382

Query: 393 LQDFDSTGNIKLSFGKK 409
                  GN  +  GKK
Sbjct: 383 -----VKGNYVIQLGKK 394


>gi|283956666|ref|ZP_06374145.1| tyrosyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1336]
 gi|283791915|gb|EFC30705.1| tyrosyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1336]
          Length = 401

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 106/361 (29%), Positives = 180/361 (49%), Gaps = 22/361 (6%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   L  + +LQK G     L+G  T  IGDPS +  +R+ +  +++ 
Sbjct: 42  GFDPTAPDLHLGHSVVLTKMAFLQKHGAIVQFLIGDFTGQIGDPSGKSATRKKLDKEQVL 101

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
            N +     + + +     K    +  N TWL  +    ++ E+ S FSV RML  +   
Sbjct: 102 INAK----TYETQVFKVLDKEKTQIKFNSTWLNELGAAGIV-ELTSTFSVARMLERDDFT 156

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R K +  +S  EF Y +LQ YD V L  +    ++MGG+DQ  N++ G  L       K
Sbjct: 157 KRFKEQSPISICEFLYPLLQGYDSVALKSD----IEMGGTDQKFNLLMGRQLQRVYNIGK 212

Query: 221 LFA-LTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
             A +  PLL    G  KM K+L+  I + ++     + +    +I D  +  + + L+ 
Sbjct: 213 EQAVIMMPLLEGLDGVNKMSKSLNNYIGVTEKAN---DMYAKILSISDELMFRYYELLSQ 269

Query: 279 LPMSEIDRMAK--LQGK-EINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQH 335
             + EI ++ K   QG     +AK+ +A EIT   H +EEA  A +     FD  IHSQ+
Sbjct: 270 KSLEEIAQIKKDIEQGNLHPKKAKENLALEITERFHSKEEANNAKSE----FD-RIHSQN 324

Query: 336 MPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
                +++ E+   + L   +V+ G  +ST+ ARR + +NA+ +N+  +S+E++ ++  +
Sbjct: 325 ALPSDMAEFEIQGKIWLAKALVECGLESSTSAARRSISANAVSVNSQKVSDEQMHLERGE 384

Query: 396 F 396
           +
Sbjct: 385 Y 385


>gi|210631213|ref|ZP_03296803.1| hypothetical protein COLSTE_00688 [Collinsella stercoris DSM 13279]
 gi|210160124|gb|EEA91095.1| hypothetical protein COLSTE_00688 [Collinsella stercoris DSM 13279]
          Length = 404

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 99/364 (27%), Positives = 177/364 (48%), Gaps = 31/364 (8%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D T+  LH GH   L  +   Q  GH+   ++G GT+ IGDPS ++ +R  +  +E+
Sbjct: 38  LGVDPTSPDLHLGHAVPLRKMRQFQDLGHRVTLIIGNGTATIGDPSGKNSTRPQLTQEEV 97

Query: 100 QENIEKIKGIFSSFIKYGTGKTDA---LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSF 156
           + N        ++++       D     +++N  W+  +   +LL  I S F+V R+L  
Sbjct: 98  EANA-------ATYVAQAMKILDPEKTTIVHNGDWMFPMGLAELL-SIASKFTVARILER 149

Query: 157 ESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL 216
           +    R + +  ++  EF Y I+QAYD V++    +  ++MGG+DQ  N++ G +L E++
Sbjct: 150 DDFTKRYQSQTPIALHEFLYPIMQAYDSVKI----EADVEMGGNDQLFNLLAGRELMEKM 205

Query: 217 KTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKR 275
                 ALT PLL    GT KM K+    I L  E   P + +    +I D  +  + + 
Sbjct: 206 GMEPQIALTMPLLEGTDGTRKMSKSYGNYIGLTDE---PADMFGKTMSIPDEMIGKYYRL 262

Query: 276 LTTLPMSEIDRM-AKLQGKEIN--EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIH 332
            ++L   E+D++ A L     N  E K+ +  ++ T  H    + +AA AA   FD    
Sbjct: 263 ASSLSPEEVDKIDAALADGSANPYELKRALGRDLVTTYH----SAEAAVAAEAEFDQVHK 318

Query: 333 SQHMPT--ISISKDEVSRGMGLLTL---IVKAGFATSTNEARRHLKSNAIKINNSIISNE 387
           ++ MP+    ++ + V    GL+ L   +  AG A S  +ARR +    +K++   ++ +
Sbjct: 319 NREMPSDIAEVAVEIVVNDEGLVYLPAVLQAAGLAPSAGQARRDIDGGGVKLDGEAVAPK 378

Query: 388 KLQI 391
              +
Sbjct: 379 AYNV 382


>gi|325983358|ref|YP_004295760.1| Tyrosyl-tRNA synthetase [Nitrosomonas sp. AL212]
 gi|325532877|gb|ADZ27598.1| Tyrosyl-tRNA synthetase [Nitrosomonas sp. AL212]
          Length = 400

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 99/356 (27%), Positives = 170/356 (47%), Gaps = 21/356 (5%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   L  L  LQ  GH  + L+G  T +IGDPS ++ +R  +  +++ 
Sbjct: 40  GFDPTAPDLHLGHTVLLNKLRQLQVMGHHILFLIGDFTGMIGDPSGKNSTRPPLTREQVA 99

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           EN +        F      +T+ +   N TW+  +   DL++ + +  +V RML  +   
Sbjct: 100 ENAQSYTT--QVFKILNPDQTEVVF--NSTWMGKMDAADLIK-LAATHTVARMLERDDFD 154

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R +  Q+++  EF Y ++Q YD V L  +    L++GG+DQ  N++ G +L +     +
Sbjct: 155 KRYRNNQAIAIHEFLYPLIQGYDSVALKAD----LELGGTDQKFNLLMGRELQKHFGQAQ 210

Query: 221 LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTL 279
              LT PLL    G  KM K+L+  + + +   SP   +    ++ D  +  + + L+  
Sbjct: 211 QCILTMPLLEGLDGVNKMSKSLNNYVGITE---SPAEIFGKLMSVSDQLMWRYLELLSFE 267

Query: 280 PMSEID--RMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMP 337
            +  I   R     G+   + K I+A E+ T  H R  AE A       F      + +P
Sbjct: 268 SLQTIQKWREEVAAGRNPRDIKVILAQEMVTRFHNRTSAEDALADFEARFKHGALPEEIP 327

Query: 338 --TISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
              I     E+     L+ ++ + G   ST+EA R ++  A+K+NN  I+++ +QI
Sbjct: 328 EKIIQAPGSEIP----LVQVLKQTGLTASTSEALRMIEQGAVKLNNEKITDKSIQI 379


>gi|315586560|gb|ADU40941.1| tyrosine--tRNA ligase [Helicobacter pylori 35A]
          Length = 402

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 105/377 (27%), Positives = 179/377 (47%), Gaps = 34/377 (9%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   +  L  LQ+ G +   L+G  T++IGDP+ ++E+R+ +  +++ 
Sbjct: 44  GFDPTAPDLHLGHTVLIQKLALLQQYGARVKFLIGDFTAMIGDPTGKNETRKPLNREQVL 103

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           EN +     +   I     +    +  N TWL ++    ++ E+ + FSV RML  +   
Sbjct: 104 ENAK----TYEEQIYKILDQKHTEVCFNSTWLDTLGAKGII-ELCAKFSVARMLERDDFT 158

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R K  + +S +EF Y +LQ YD V +    D  +++GG+DQ  N++ G  L       K
Sbjct: 159 KRYKENRPISIVEFLYPLLQGYDSVAM----DADIELGGNDQKFNLLVGRFLQRAYGLNK 214

Query: 221 LFA-LTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
             + +T PLL    G  KM K+L   + + +E   P   +    ++ D  +  +   L+ 
Sbjct: 215 EQSIITMPLLEGLDGVQKMSKSLGNYVGITEE---PNAMFGKIMSVSDDLMWRYYTLLSA 271

Query: 279 LPMSEIDRMAK------LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIH 332
             + EI+ +        L  K + E    +A EI    +  E+A KA     E F     
Sbjct: 272 KTLEEIEDLKHGILNQTLHPKAVKED---LAGEIVARYYDDEQAIKAK----EQFSKVFS 324

Query: 333 SQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
           +  +P I +  D    G+G+L ++ + GF  ST++ARR ++   +KIN  ++ NE  +  
Sbjct: 325 ANLLPEILLESD-FDEGVGILDVLKQIGFCPSTSQARRDIQGGGVKINQEVVKNESYRF- 382

Query: 393 LQDFDSTGNIKLSFGKK 409
                  GN  +  GKK
Sbjct: 383 -----VKGNYVIQLGKK 394


>gi|167855747|ref|ZP_02478502.1| alanine racemase [Haemophilus parasuis 29755]
 gi|167853144|gb|EDS24403.1| alanine racemase [Haemophilus parasuis 29755]
          Length = 396

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 102/382 (26%), Positives = 178/382 (46%), Gaps = 29/382 (7%)

Query: 10  SILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
            + SE   I ++   R L +          +G D TA  +H GH   L  L   Q  GH+
Sbjct: 18  DVYSEADLIEKLKENRPLRV---------KLGADPTAPDIHLGHTVVLNKLRQFQNFGHE 68

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
            I L+G  T+ +GDPS ++ +R  +  +++  N E  K       K    +   ++ N++
Sbjct: 69  VIFLIGDFTATVGDPSGKNTTRPPLSREDVLRNAETYK---EQIYKILDPQKTRIVFNSD 125

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
            WL  +  + ++R + S ++V RML  +  + R    QS++  EF Y +LQ +D V L  
Sbjct: 126 -WLGELGTVGMIR-LASNYTVARMLERDDFKKRFANNQSIAIHEFIYPLLQGHDSVAL-- 181

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLN 248
             +  +++GG+DQ  N++ G +L +        A+T PLL    G  KM K+L   I + 
Sbjct: 182 --EADIELGGTDQTFNLLIGRELQKAAGQKPQVAMTLPLLVGLDGEKKMSKSLGNYIGVT 239

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM-AKLQ-GKEINEAKKIIATEI 306
           +    P   +    +I D  +  +   L+  P++EI ++ A ++ GK   + K ++A EI
Sbjct: 240 E---VPNEMFGKIMSISDELMWDWYNLLSFRPLTEIAQLKADVEAGKNPRDVKILLAKEI 296

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
               H   +A+ A    +  F        MP  +   +     +GL TL+ +AG   ST+
Sbjct: 297 IARFHSEADADAAEQEFINRFQKGAMPDEMPEFTFEGE-----IGLATLLKEAGLVPSTS 351

Query: 367 EARRHLKSNAIKINNSIISNEK 388
           EA R  +   +KI+   + + K
Sbjct: 352 EAIRSAQQGGVKIDGEKVDDVK 373


>gi|57238143|ref|YP_179393.1| tyrosyl-tRNA synthetase [Campylobacter jejuni RM1221]
 gi|81353426|sp|Q5HTJ2|SYY_CAMJR RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|57166947|gb|AAW35726.1| tyrosyl-tRNA synthetase [Campylobacter jejuni RM1221]
 gi|315058704|gb|ADT73033.1| Tyrosyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni S3]
          Length = 401

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 105/361 (29%), Positives = 182/361 (50%), Gaps = 22/361 (6%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   L  + +LQK G     L+G  T  IGDPS +  +R+ +  +++ 
Sbjct: 42  GFDPTAPDLHLGHSVVLTKMAFLQKHGAIVQFLIGDFTGQIGDPSGKSATRKKLDKEQVL 101

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
            N +     + + +     K    +  N TWL  +    ++ E+ S FSV RML  +   
Sbjct: 102 INAK----TYETQVFKVLDKEKTQIKFNSTWLNELGAAGIV-ELTSTFSVARMLERDDFT 156

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R K +  +S  EF Y +LQ YD V L  +    ++MGG+DQ  N++ G  L       K
Sbjct: 157 KRFKEQSPISICEFLYPLLQGYDSVALKSD----IEMGGTDQKFNLLMGRQLQRVYNIGK 212

Query: 221 LFA-LTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
             A +  PLL    G  KM K+L+  I + ++     + +    +I D  +  + + L+ 
Sbjct: 213 EQAVIMMPLLEGLDGVNKMSKSLNNYIGVTEKAN---DMYAKILSISDELMFRYYELLSQ 269

Query: 279 LPMSEIDRMAK-LQGKEIN--EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQH 335
             + EI ++ K ++   ++  +AK+ +A EIT   H +EEA  A +     FD  IHSQ+
Sbjct: 270 KSLEEIAQIKKDIEQSNLHPKKAKENLALEITERFHSKEEANNAKSE----FD-RIHSQN 324

Query: 336 MPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
                +++ E+   + L   +V+ G  +ST+ ARR + +NA+ +N+  +S+E++ +K  +
Sbjct: 325 ALPSDMAEFEIQGKIWLAKALVECGLESSTSAARRSISANAVSVNSQKVSDEQMYLKQGE 384

Query: 396 F 396
           +
Sbjct: 385 Y 385


>gi|313893604|ref|ZP_07827173.1| tyrosine--tRNA ligase [Veillonella sp. oral taxon 158 str. F0412]
 gi|313441875|gb|EFR60298.1| tyrosine--tRNA ligase [Veillonella sp. oral taxon 158 str. F0412]
          Length = 402

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 100/358 (27%), Positives = 171/358 (47%), Gaps = 20/358 (5%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  L   Q+ GH+ + ++GG T+ IGDP+ +  +R  +  +E+
Sbjct: 42  LGLDPTAPDIHLGHTVPLRKLRLFQEFGHQVVIVIGGFTARIGDPTGKSVTRPPLTKEEV 101

Query: 100 QENIEKIK-GIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
            +N E  K  IF       T     ++ +N  WL S+ + D+LR + S ++V RM+  + 
Sbjct: 102 LKNAETYKTQIFKVLDPEKT-----IVRDNSEWLESMNFADVLR-LASSYTVARMMERDD 155

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
              R K  + +   EF Y ++Q +D V L  +    ++ GG+DQ  N++ G  L E    
Sbjct: 156 FSKRFKEGRPIGVHEFMYPLMQGHDSVALQAD----VEFGGTDQTFNLLMGRHLQELEGQ 211

Query: 219 PKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT 277
                +T PLL    G  KM K+L   I +++E   P   +    +I D  ++ +   +T
Sbjct: 212 EPQVVITMPLLEGLDGVQKMSKSLGNYIGIDEE---PKEMYGKAMSIPDELMMRYFMLVT 268

Query: 278 TLPMSEIDRMAK-LQGKEIN--EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQ 334
            +P+ E + M K L+  E++  +AK  +A  I  + HG E A +A       F       
Sbjct: 269 DMPIEEQEDMEKRLESGELHPRDAKMQLARTIVRLYHGEEAALEAEEEFKRVFQQRALPT 328

Query: 335 HMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
            +P  +++    +  + +      AG   S  EARR +K+ A K+N    + E L ++
Sbjct: 329 DIPEYAMNAP--TEPIFVPQFCTDAGLTASNGEARRSIKAGAFKVNGEKYTEENLTLE 384


>gi|110597950|ref|ZP_01386231.1| tyrosyl-tRNA synthetase [Chlorobium ferrooxidans DSM 13031]
 gi|110340399|gb|EAT58888.1| tyrosyl-tRNA synthetase [Chlorobium ferrooxidans DSM 13031]
          Length = 406

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 104/364 (28%), Positives = 178/364 (48%), Gaps = 30/364 (8%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D +   LH GH   L  L   Q  GH+ I ++G  T++IGDPS + ++R  + ++E 
Sbjct: 44  LGADPSRPDLHLGHSVVLRKLREFQDLGHEAILIIGDFTAMIGDPSGKSKTRPQLSAKEA 103

Query: 100 QENIEKIKGIFSSFIKYGTGKTDA---LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSF 156
           +EN E       S+ +  +   D     +  N  WL ++K+ D++R + S ++V RML  
Sbjct: 104 RENGE-------SYFEQASKILDPDKTTICYNSDWLGAMKFADIIR-LSSHYTVARMLER 155

Query: 157 ESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL 216
           +    R +  + +S  EF Y + Q  D V L  +    +++GG+DQ  N++ G DL    
Sbjct: 156 DDFERRYRSNEPISIHEFLYPLAQGMDSVHLKND----IELGGTDQKFNLLVGRDLQREY 211

Query: 217 KTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKR 275
             P    +T  LL  + G  KM K+L  AI  N     P   +    +I D  + ++ + 
Sbjct: 212 GIPPQVCITMELLVGSDGKEKMSKSLGNAICFN---DPPSEMYGKVLSIPDPLIETWCRL 268

Query: 276 LTTLPMSE-IDRMAKLQGKEINE--AKKIIATEITTMVHGREEAEKAATAAMECFDMSIH 332
           L  +P +E     A L+ +E +   AK+ +A EI    + R  A  A T   + F   +H
Sbjct: 269 L--VPQTERAATSAILEQRETDPRSAKRALAREIVASYYSRSAAADAETHFDQLF---VH 323

Query: 333 SQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIIS--NEKLQ 390
            +    I +   E  + + L+ L+V  G A S +EARR ++ N+I ++   IS  +EK+ 
Sbjct: 324 KKAPDHIELFLFE-EQSLPLIDLLVTLGAAPSKSEARRMIQQNSILVDERKISEIHEKID 382

Query: 391 IKLQ 394
           + ++
Sbjct: 383 LDIE 386


>gi|288939873|ref|YP_003442113.1| tyrosyl-tRNA synthetase [Allochromatium vinosum DSM 180]
 gi|288895245|gb|ADC61081.1| tyrosyl-tRNA synthetase [Allochromatium vinosum DSM 180]
          Length = 400

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 99/349 (28%), Positives = 169/349 (48%), Gaps = 16/349 (4%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   +  L   Q+ GH+ + L+G  T +IGDP+ +  +R+ +  ++I+
Sbjct: 39  GFDPTAPDLHLGHTVLINKLRQFQELGHEILFLIGDFTGMIGDPTGKSVTRKPLSREQIE 98

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           EN +  K     F      KT  L   N  WL  +    L+ ++ +  +V RML  +   
Sbjct: 99  ENAQTYKD--QVFRILDPDKTRILF--NSHWLDDLGTAGLV-QLAARQTVARMLERDDFS 153

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R K  Q ++  EF Y ++Q YD V L  +    +++GG+DQ  N++ G  L E      
Sbjct: 154 KRYKSGQPIAIHEFLYPLIQGYDSVALRAD----VELGGTDQKFNLLMGRQLQEAYGQEA 209

Query: 221 LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTL 279
              +T P+L    G  KM K+L   I +     +P   +    +I D  +  + + L+  
Sbjct: 210 QVVITLPILEGLDGVQKMSKSLGNYIGI---ADAPEEMFGKLMSISDDLMWRYFELLSFR 266

Query: 280 PMSEID--RMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMP 337
            +SEI+  R A  +G    + K  +  E+ T  HG E+A KA  A +  F       +MP
Sbjct: 267 ELSEIEDWRRAVSEGANPRDIKFELGLELVTRFHGAEQARKAQEAFVARFQKGAMPDNMP 326

Query: 338 TISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISN 386
            + ++  + + G+ L  L+ +AG   ST+EA R ++  A++I+   + +
Sbjct: 327 FVELACSDDA-GLPLANLLKEAGLVASTSEAIRMVRQGAVRIDGERVED 374


>gi|165976904|ref|YP_001652497.1| tyrosyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 3
           str. JL03]
 gi|165877005|gb|ABY70053.1| tyrosyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 3
           str. JL03]
          Length = 396

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 102/380 (26%), Positives = 174/380 (45%), Gaps = 29/380 (7%)

Query: 10  SILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
           +I SE   I ++   R L I          +G D TA  +H GH   L  L   Q+ GH+
Sbjct: 18  NIYSEEDLIEKLKENRPLRI---------KLGADPTAPDIHLGHTVVLNKLRQFQQLGHE 68

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
            I L+G  T ++GDPS ++ +R  +  +++  N E  K       K        ++ N+E
Sbjct: 69  VIFLIGDFTGMVGDPSGKNSTRPPLTREDVLRNAETYK---QQLFKILDPNKTRVVFNSE 125

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
            WL  +    ++R + S ++V RML  +  + R    QS++  EF Y +LQ +D V L  
Sbjct: 126 -WLGKLGTEGMIR-LASNYTVARMLERDDFKKRFTNNQSIAIHEFIYPLLQGHDSVAL-- 181

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLN 248
             +  +++GG+DQ  N++ G +L +        A+T PLL    G  KM K+L   I + 
Sbjct: 182 --EADVELGGTDQTFNLLVGRELQKSAGQKPQVAMTLPLLVGLDGEKKMSKSLGNYIGVT 239

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATEI 306
               +P + +    +I D  +  +   L+  P+ EI ++     +GK   + K ++A E+
Sbjct: 240 ---DAPSDMFGKVMSISDELMWDWYNLLSFRPLDEIAQLKANVAEGKNPRDVKILLAKEL 296

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
               H +  A+ A    +  F        MP  +         +GL TL+ +AG   ST+
Sbjct: 297 IARFHDQAAADSAEQEFINRFQKGAIPDEMPEFTFEGK-----IGLATLLKEAGLVASTS 351

Query: 367 EARRHLKSNAIKINNSIISN 386
           EA R  +   +KI+   + +
Sbjct: 352 EAIRSAQQGGVKIDGEKVED 371


>gi|301156148|emb|CBW15619.1| unnamed protein product [Haemophilus parainfluenzae T3T1]
          Length = 395

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 107/381 (28%), Positives = 173/381 (45%), Gaps = 29/381 (7%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           ILSE   I ++   R L I          +G D TA  +H GH   L  L   Q+ GH+ 
Sbjct: 18  ILSEADLIEKLKENRPLKI---------KLGADPTAPDIHLGHTVVLNKLRQFQQLGHEV 68

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
             L+G  T ++GDPS ++ +R  +  +++  N E  K       K    +   ++ N+E 
Sbjct: 69  YFLIGDFTGMVGDPSGKNTTRPPLSREDVLRNAETYK---EQIYKILDPQKTKIVFNSE- 124

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           WL  +    ++R + S ++V RML  +  + R    Q ++  EF Y +LQ YD V L   
Sbjct: 125 WLGKLGTEGMIR-LASNYTVARMLERDDFKKRFGNNQPIAIHEFIYPLLQGYDSVAL--- 180

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNK 249
            +  +++GG+DQ  N++ G +L +        A+T PLL    G  KM K+L   I +  
Sbjct: 181 -EADVELGGTDQKFNLLVGRELQKSAGQKPQVAITLPLLVGLDGEKKMSKSLGNYIGVT- 238

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATEIT 307
              +P + +    +I D  +  +   L+  P++EI  +      GK   + K ++A EI 
Sbjct: 239 --DAPSDMFGKIMSISDELMWDWYNLLSFRPLTEIAELKAEVANGKNPRDVKILLAKEII 296

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
              H    AE A    +  F        MP  +   +     +GL TL+ +AG   ST+E
Sbjct: 297 ARFHDEAAAEAAEQEFINRFQKGAMPDEMPEFTFEGE-----IGLATLLKEAGLVPSTSE 351

Query: 368 ARRHLKSNAIKINNSIISNEK 388
           A R  K   +KIN   + + K
Sbjct: 352 AIRSAKQGGVKINGEKVEDMK 372


>gi|254490120|ref|ZP_05103312.1| tyrosyl-tRNA synthetase [Methylophaga thiooxidans DMS010]
 gi|224464708|gb|EEF80965.1| tyrosyl-tRNA synthetase [Methylophaga thiooxydans DMS010]
          Length = 399

 Score =  125 bits (313), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 108/392 (27%), Positives = 187/392 (47%), Gaps = 40/392 (10%)

Query: 10  SILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
            IL E   + ++ + R L I           G+D TA  LH GH   L  L   Q  GH 
Sbjct: 17  EILVESELVEKLESGRPLRIKA---------GFDPTAPDLHLGHTVLLNKLKQFQDLGHH 67

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN-IEKIKGIFSSFIKYGTGKTDALMLNN 128
            + L+G  T +IGDP+ ++ +R+ +   ++++N +   + +F    +    KT+ +   N
Sbjct: 68  ILFLIGDFTGMIGDPTGKNVTRKPLTPDQVKQNAVTYQEQVFKILDRE---KTEVVF--N 122

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             W+  +   D++R + S  +V RML  +    R    Q ++  EF Y ++Q YD VEL 
Sbjct: 123 SHWMNDMSSADMIR-LASNHTVARMLERDDFHKRYTSNQPIAIHEFLYPLIQGYDSVEL- 180

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWL 247
              +  +++GG+DQ  N++ G +L +         LT P+L    G  KM K+L+  I +
Sbjct: 181 ---NADVELGGTDQKFNLLMGRELQKAYGKAPQCILTMPILEGLDGVQKMSKSLNNYIGI 237

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATE 305
           N    SP + +    +I D  +  + + L+   + EI+  R    QG+   E KK  A E
Sbjct: 238 N---DSPKDIFGKLMSISDDLMWRYIELLSFRNIKEIEQWRQDVEQGRNPIEIKKDFAEE 294

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMP------TISISKDEVSRGMGLLTLIVKA 359
           I    H     E+A T A + F+       +P      T+++  +    GM +  ++ +A
Sbjct: 295 IVARFHD----EQAGTDARQGFENQFKKGELPDDIPEVTLTVGVE----GMAIANVLKEA 346

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
           G ++ST++A R +K  A KI+   I+++ L I
Sbjct: 347 GLSSSTSDAMRMIKQGAAKIDGEKITDKSLLI 378


>gi|154147934|ref|YP_001406831.1| tyrosyl-tRNA synthetase [Campylobacter hominis ATCC BAA-381]
 gi|153803943|gb|ABS50950.1| tyrosyl-tRNA synthetase [Campylobacter hominis ATCC BAA-381]
          Length = 403

 Score =  125 bits (313), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 114/376 (30%), Positives = 188/376 (50%), Gaps = 30/376 (7%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           IG D TAS LH GH   L  L +LQ+ G     L+G  T+ IGDP+ + E+R+ +    +
Sbjct: 44  IGMDPTASDLHLGHSVVLKKLAFLQQHGAIVQFLIGDFTAQIGDPTGKSETRKKLDRNTV 103

Query: 100 QENIEKIKG-IFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
            +N +  +  +F    K  T      +L N  WL  +    ++ E+ S FSV RML  + 
Sbjct: 104 LKNAKTYQDQVFKILDKDRTN-----ILFNSEWLNRLGATGMI-ELASTFSVARMLERDD 157

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
             +R K EQ +S  EF Y +LQ YD V +  +    +++GG+DQ  N++ G  L      
Sbjct: 158 FTNRFKNEQPISISEFLYPLLQGYDSVCMKSD----IEIGGTDQKFNLLMGRQLQRTYNV 213

Query: 219 PKLFA-LTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRL 276
            K  A +  PLL    G  KM K+L   I + +     Y       +I+D  + S+ + L
Sbjct: 214 GKEQAVMMMPLLVGLDGVNKMSKSLGNYIGITENANDMY---AKILSINDELMWSWYELL 270

Query: 277 TTLPMSEIDRMAKL-QGKEINE--AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS 333
           ++  + +I+   KL Q  E++   AK+ +A +I T  +     E +A  A E FD  +H 
Sbjct: 271 SSYSLDDINLFKKLVQDGELHPKVAKESLAMDIVTKFYD----ENSALKAKEEFD-KVHV 325

Query: 334 QHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL 393
            +     I +  +S    ++  ++    A S+++ARR ++SNA+ ++ + I++E+LQ+  
Sbjct: 326 NNEAPSEIKEFTISSPAWIVKALMSCKLAVSSSDARRLIRSNAVSVDKNKIADEQLQL-- 383

Query: 394 QDFDSTGNIKLSFGKK 409
               S+GN  L  GKK
Sbjct: 384 ----SSGNYFLQVGKK 395


>gi|187927475|ref|YP_001897962.1| tyrosyl-tRNA synthetase [Ralstonia pickettii 12J]
 gi|187724365|gb|ACD25530.1| tyrosyl-tRNA synthetase [Ralstonia pickettii 12J]
          Length = 421

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 100/363 (27%), Positives = 177/363 (48%), Gaps = 26/363 (7%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  +  LQ  GH+ I L+G  TS IGDPS R+ +R  +  ++I
Sbjct: 64  LGLDPTAPDIHIGHTVVLNKMRQLQDLGHQVIFLIGDFTSTIGDPSGRNATRPPLTREQI 123

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           + N +      S  +     KT+  +  N  W C       + ++ + ++V RM+  +  
Sbjct: 124 EANAQTYYRQASMVLD--PSKTE--IRYNSEW-CDPLGARGIIQLAAKYTVARMMERDDF 178

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R K    +S  EF Y ++Q YD V L  +    L++GG+DQ  N++ G +L +     
Sbjct: 179 TKRYKAGVPISVHEFLYPLMQGYDSVALKSD----LELGGTDQKFNLLVGRELQKEYGQE 234

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               LT PLL    G  KM K+    + +++   +P   +    +I D  + ++   L+ 
Sbjct: 235 PQCILTMPLLVGLDGVEKMSKSKGNYVGISE---APNEMFGKLMSISDDLMWTYYTLLSF 291

Query: 279 LPMSEIDRMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIH---S 333
            P++EID M +    G+   + K ++A EI    H + +AE+    A+E F+        
Sbjct: 292 RPLAEIDLMKQEIALGRNPRDCKVMLAQEIVARFHSQADAER----ALEDFNHRARGGVP 347

Query: 334 QHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL 393
             +P I +S       +G+  L+ +AG   ST++A R+++   +KI+ ++IS++ L++  
Sbjct: 348 DDIPQIELS----GAPLGIAQLLKQAGLCPSTSDANRNIEQGGVKIDGTVISDKGLKVDA 403

Query: 394 QDF 396
             F
Sbjct: 404 GTF 406


>gi|241662005|ref|YP_002980365.1| tyrosyl-tRNA synthetase [Ralstonia pickettii 12D]
 gi|240864032|gb|ACS61693.1| tyrosyl-tRNA synthetase [Ralstonia pickettii 12D]
          Length = 421

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 100/363 (27%), Positives = 178/363 (49%), Gaps = 26/363 (7%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  +  LQ  GH+ I L+G  TS IGDPS R+ +R  +  ++I
Sbjct: 64  LGLDPTAPDIHIGHTVVLNKMRQLQDLGHQVIFLIGDFTSTIGDPSGRNATRPSLTREQI 123

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           + N +      S  +     KT+  +  N  W C       + ++ + ++V RM+  +  
Sbjct: 124 ETNAQTYYRQASMVLD--PSKTE--IRYNSEW-CDPLGARGIIQLAAKYTVARMMERDDF 178

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R K    +S  EF Y ++Q YD V L  +    L++GG+DQ  N++ G +L +     
Sbjct: 179 TKRYKAGVPISVHEFLYPLMQGYDSVALKSD----LELGGTDQKFNLLVGRELQKEYGQE 234

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               LT PLL    G  KM K+    + +++   +P   +    +I D  + ++   L+ 
Sbjct: 235 PQCILTMPLLVGLDGVEKMSKSKGNYVGISE---APNEMFGKLMSISDDLMWTYYTLLSF 291

Query: 279 LPMSEIDRMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIH---S 333
            P++EID M +    G+   + K ++A EI    H + +AE+    A+E F+        
Sbjct: 292 RPLAEIDLMKQEIALGRNPRDCKVMLAQEIVARFHSQADAER----ALEDFNHRARGGVP 347

Query: 334 QHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL 393
             +P I +S       +G+  L+ +AG   ST++A R+++   +KI+ ++IS++ L+++ 
Sbjct: 348 DDIPQIELS----GAPLGIAQLLKQAGLCPSTSDANRNIEQGGVKIDGTVISDKGLKVEA 403

Query: 394 QDF 396
             F
Sbjct: 404 GTF 406


>gi|108563184|ref|YP_627500.1| tyrosyl-tRNA synthetase [Helicobacter pylori HPAG1]
 gi|107836957|gb|ABF84826.1| tyrosyl-tRNA synthetase [Helicobacter pylori HPAG1]
          Length = 402

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 103/377 (27%), Positives = 180/377 (47%), Gaps = 34/377 (9%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   +  L  LQ+ G +   L+G  T++IGDP+ ++E+R+ +  +++ 
Sbjct: 44  GFDPTAPDLHLGHTVLIQKLALLQQYGARVKFLIGDFTAMIGDPTGKNETRKPLNREQVL 103

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           EN +     +   I     +    +  N  WL ++    ++ E+ + FSV RML  +   
Sbjct: 104 ENAK----TYEEQIYKILDEKHTEVCFNSAWLDTLGAKGMI-ELCAKFSVARMLERDDFA 158

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R K  + +S +EF Y +LQ YD V +    D  +++GG+DQ  N++ G  L       K
Sbjct: 159 KRYKENRPISIVEFLYPLLQGYDSVAM----DADIELGGNDQKFNLLVGRFLQRAYGLNK 214

Query: 221 -LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               +T PLL    G  KM K+L   + + +E   P   +    ++ D  +  +   L+ 
Sbjct: 215 EQSVITMPLLEGLDGVQKMSKSLGNYVGITEE---PNAMFGKIMSVSDDLMWRYYTLLSA 271

Query: 279 LPMSEIDRMAK------LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIH 332
             + EI+ +        L  K + E    +A+EI    +  ++A KA     E F     
Sbjct: 272 KTLEEIEDLKHGILNQTLHPKAVKED---LASEIVARYYDNDQAFKAK----EQFSKVFS 324

Query: 333 SQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
           +  +P I +S+ +   G+G+L ++ + GF  ST++ARR ++   +KIN  ++ NE  +  
Sbjct: 325 ANLLPEI-LSESDFDEGVGILDVLKQIGFCPSTSQARRDIQGGGVKINQEVVKNESYRF- 382

Query: 393 LQDFDSTGNIKLSFGKK 409
                  GN  +  GKK
Sbjct: 383 -----VKGNYVIQLGKK 394


>gi|303228359|ref|ZP_07315193.1| tyrosine--tRNA ligase [Veillonella atypica ACS-134-V-Col7a]
 gi|302516972|gb|EFL58880.1| tyrosine--tRNA ligase [Veillonella atypica ACS-134-V-Col7a]
          Length = 402

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/355 (27%), Positives = 167/355 (47%), Gaps = 20/355 (5%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  L   Q+ GH+ + ++GG T+ IGDP+ +  +R  +  +E+
Sbjct: 42  LGLDPTAPDIHLGHTVPLRKLRLFQEFGHQVVIVIGGFTARIGDPTGKSVTRPPLTKEEV 101

Query: 100 QENIEKIK-GIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
            +N E  K  IF       T     ++ +N  WL S+ + D+LR + S ++V RM+  + 
Sbjct: 102 LKNAETYKTQIFKVLDPEKT-----IVRDNSEWLESMNFADVLR-LASSYTVARMMERDD 155

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
              R K  + +   EF Y ++Q  D V L  +    ++ GG+DQ  N++ G  L +    
Sbjct: 156 FDKRYKEGRPIGVHEFMYPLMQGQDSVALHAD----VEFGGTDQTFNLLMGRHLQDLAGQ 211

Query: 219 PKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT 277
                +T PLL    G  KM K+L   I +++    P + +    +I D  ++ +   +T
Sbjct: 212 EPQVVITMPLLEGLDGVQKMSKSLGNYIGIDE---VPKDMYGKAMSIPDELMMRYFMLVT 268

Query: 278 TLPMSEIDRM-AKLQGKEIN--EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQ 334
            + + + D M  +L+   ++  +AK  +A  I  + HG + A++A       F       
Sbjct: 269 DMSIEDQDDMEERLENGTLHPRDAKMQLAKTIVRLYHGEQAAQEAEDEFKRVFQQHALPT 328

Query: 335 HMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKL 389
            +P  +I  D+ S  + +      AG   S  EARR +K+ A K+N      E L
Sbjct: 329 DIPEYAI--DKPSEAIFVPQFCTDAGLTASNGEARRSIKAGAFKVNGEKYGEENL 381


>gi|297170760|gb|ADI21782.1| tyrosyl-tRNA synthetase [uncultured gamma proteobacterium
           HF0130_22O14]
          Length = 404

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 110/409 (26%), Positives = 194/409 (47%), Gaps = 34/409 (8%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           IL E+ F+ ++   + L I          +G+D TA  LH GH   +  +   Q+ GH+ 
Sbjct: 18  ILVEKDFLEKLKKNKPLKI---------KVGFDPTAPDLHLGHTVIINKMRQFQEFGHEV 68

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKG-IFSSFIKYGTGKTDALMLNNE 129
           I L+G  T +IGDPS  +E+R ++  ++++EN    K  IF    K  T     + LN+ 
Sbjct: 69  IFLIGDYTGMIGDPSGVNETRPVLTVEQVKENARTYKNQIFKILDKDKT----RIELNS- 123

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
           +W+  +   +L+ +I S ++V RML  +  + R K E  +S  EF Y ++Q YD V L  
Sbjct: 124 SWMNKVTSSELI-DIASKYTVARMLERDDFKKRFKSENPISIHEFIYPLVQGYDSVAL-- 180

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLN 248
             +C ++MGG+DQ  N++ G  L +         +T PLL    G  KM K+    + LN
Sbjct: 181 --ECDVEMGGTDQKFNLLVGRHLQQLYGQEPQTIITLPLLEGLDGVKKMSKSADNYVALN 238

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIATEI 306
               S  + +    ++ D  +  + + +++  ++EI  +      G    + K ++A EI
Sbjct: 239 ---DSGDDMFGKIMSVSDDLMWRYFELVSSKNLTEIKNLKNSVNDGANPRDIKFLLAEEI 295

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMG---LLTLIVKAGFAT 363
               H +  A+KA  + M+ F      + +  I +S  ++    G   L  L+       
Sbjct: 296 VERFHNQSVAKKAKESFMQRFQKGGIPEDIDLIEVSIKDIQNDDGETNLPRLLAHTNLVN 355

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           S +E  R +K+ +++I+   IS   L+I+     +   + LS GK+  I
Sbjct: 356 SISEGHRAIKAGSVRIDGEKISQISLEIQ-----TKSELILSQGKRRFI 399


>gi|237833291|ref|XP_002365943.1| tyrosyl-tRNA synthetase, putative [Toxoplasma gondii ME49]
 gi|211963607|gb|EEA98802.1| tyrosyl-tRNA synthetase, putative [Toxoplasma gondii ME49]
 gi|221508909|gb|EEE34478.1| tyrosyl-tRNA synthetase, putative [Toxoplasma gondii VEG]
          Length = 646

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 71/213 (33%), Positives = 101/213 (47%), Gaps = 48/213 (22%)

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV-----------------RSRLKR 165
           A ++ N +WL  +  +D L E G+F S+ R+LS  SV                 RS  + 
Sbjct: 380 AAIVENCSWLSGLSSLDFLTEFGAFLSLPRLLSRSSVEETLGPCLFGRGDRSPTRSSSRN 439

Query: 166 EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALT 225
           + + SF    Y +LQA D+  L + +    Q+GG DQWGNI  G++L  R     LF LT
Sbjct: 440 KANFSFASLAYAVLQAVDWCFLRRRFGVVGQVGGRDQWGNISTGLELARRRDNLCLFGLT 499

Query: 226 SPLLTTASGTKMGKTLSGA-------------------------------IWLNKEMTSP 254
           +PLL   +G KMGK+  GA                               +WL K++T P
Sbjct: 500 TPLLLNRAGVKMGKSGGGAGTKGTRREGEGEKAGGGKEGAMHAKTPGGKTVWLRKDLTPP 559

Query: 255 YNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM 287
             FW+YWRN+DDADV    +  T L + EI+ +
Sbjct: 560 VEFWRYWRNVDDADVKRLLRWFTLLSLPEIEAL 592



 Score = 36.2 bits (82), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 23/48 (47%), Positives = 32/48 (66%), Gaps = 1/48 (2%)

Query: 39  YIGYDLTASSLHAGHLTQLMLLFWLQKTGH-KPISLMGGGTSIIGDPS 85
           Y+G DLT  SLH GHL  L+LL  LQ     +P+ L+G  T+++GDP+
Sbjct: 210 YLGIDLTGGSLHIGHLLPLLLLRRLQCLQLVRPVLLLGTATTLVGDPT 257


>gi|297379972|gb|ADI34859.1| tyrosyl-tRNA synthetase [Helicobacter pylori v225d]
          Length = 402

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 104/377 (27%), Positives = 178/377 (47%), Gaps = 34/377 (9%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   +  L  LQ+ G +   L+G  T++IGDP+ ++E+R+ +  +++ 
Sbjct: 44  GFDPTAPDLHLGHTVLIQKLALLQQYGARVKFLIGDFTAMIGDPTGKNETRKPLNREQVL 103

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           EN +     +   I     +    +  N TWL ++    ++ E+ + FSV RML  +   
Sbjct: 104 ENAK----TYEEQIYKILDQKHTEVCFNSTWLDALGAKGII-ELCAKFSVARMLERDDFT 158

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R K  + +S +EF Y +LQ YD V +    D  +++GG+DQ  N++ G  L       K
Sbjct: 159 KRYKENRPISIVEFLYPLLQGYDSVAM----DADIELGGNDQKFNLLVGRFLQRAYGLNK 214

Query: 221 -LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               +T PLL    G  KM K+L   + + +E   P   +    ++ D  +  +   L+ 
Sbjct: 215 EQSVITMPLLEGLDGVQKMSKSLGNYVGITEE---PNAMFGKIMSVSDDLMWRYYTLLSA 271

Query: 279 LPMSEIDRMAK------LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIH 332
             + EI+ +        L  K + E    +A EI    +  ++A KA     E F     
Sbjct: 272 KTLEEIEDLKHGILNQTLHPKAVKED---LAGEIVARYYDNDQAIKAK----EQFSKVFS 324

Query: 333 SQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
           +  +P I +  D    G+G+L ++ + GF  ST++ARR ++   +KIN  ++ NE  +  
Sbjct: 325 ANLLPEILLESD-FDEGVGILDVLKQIGFCPSTSQARRDIQGGGVKINQEVVKNESYRF- 382

Query: 393 LQDFDSTGNIKLSFGKK 409
                  GN  +  GKK
Sbjct: 383 -----VKGNYVIQLGKK 394


>gi|309779823|ref|ZP_07674578.1| tyrosine--tRNA ligase [Ralstonia sp. 5_7_47FAA]
 gi|308921400|gb|EFP67042.1| tyrosine--tRNA ligase [Ralstonia sp. 5_7_47FAA]
          Length = 427

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 100/363 (27%), Positives = 177/363 (48%), Gaps = 26/363 (7%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  +  LQ  GH+ I L+G  TS IGDPS R+ +R  +  ++I
Sbjct: 70  LGLDPTAPDIHIGHTVVLNKMRQLQDLGHQVIFLIGDFTSTIGDPSGRNATRPPLTREQI 129

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           + N +      S  +     KT+  +  N  W C       + ++ + ++V RM+  +  
Sbjct: 130 EANAQTYYRQASMVLD--PSKTE--IRYNSEW-CDPLGARGIIQLAAKYTVARMMERDDF 184

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R K    +S  EF Y ++Q YD V L  +    L++GG+DQ  N++ G +L +     
Sbjct: 185 TKRYKAGVPISVHEFLYPLMQGYDSVALKSD----LELGGTDQKFNLLVGRELQKEYGQE 240

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               LT PLL    G  KM K+    + +++   +P   +    +I D  + ++   L+ 
Sbjct: 241 PQCILTMPLLVGLDGVEKMSKSKGNYVGISE---APNEMFGKLMSISDDLMWTYYTLLSF 297

Query: 279 LPMSEIDRMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIH---S 333
            P++EID M +    G+   + K ++A EI    H + +AE+    A+E F+        
Sbjct: 298 RPLAEIDLMKQEIALGRNPRDCKVMLAQEIVARFHSQADAER----ALEDFNHRARGGVP 353

Query: 334 QHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL 393
             +P I +S       +G+  L+ +AG   ST++A R+++   +KI+ ++IS++ L++  
Sbjct: 354 DDIPQIELS----GAPLGIAQLLKQAGLCPSTSDANRNIEQGGVKIDGTVISDKGLKVDA 409

Query: 394 QDF 396
             F
Sbjct: 410 GTF 412


>gi|253575745|ref|ZP_04853080.1| tyrosyl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str. D14]
 gi|251844788|gb|EES72801.1| tyrosyl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str. D14]
          Length = 417

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 102/395 (25%), Positives = 189/395 (47%), Gaps = 24/395 (6%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAY-----IGYDLTASSLHAGHLTQLMLLFWL 63
           L ++S RG + +I    EL     Q VVT       +G D +A  +H GH   +  L   
Sbjct: 18  LQVIS-RGVV-EIVPEDELKQKVIQSVVTGKPLKVKLGLDPSAPDIHIGHTVVMQKLRQF 75

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q+ GH+   ++G  T  IGDP+ + E+R+ +  +++Q N E  +       K    +   
Sbjct: 76  QELGHQVQLIIGDFTGRIGDPTGKSETRKQLTEEDVQRNAETYR---QQIFKILDPEKTQ 132

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           +  N+E WL  + + D+++ + +  +V RML  +    R    Q +S  EF Y ++Q  D
Sbjct: 133 VNFNSE-WLAPMTFADVVK-LSAKVTVARMLERDDFTKRYTSGQPISIHEFFYPLMQGMD 190

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLS 242
            V L    +  +++GG+DQ  N++ G  L +        A+ +P++    G  KM K+L 
Sbjct: 191 SVAL----ESDIELGGTDQKFNLLMGRTLQKEYGKDTQVAIMTPIIEGLDGVQKMSKSLG 246

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK-LQGKEIN--EAK 299
             I +++   +P   +    ++ D  +  + + +T L + E+  + + L+   ++  +AK
Sbjct: 247 NYIGIDE---APNEIYGKAMSVPDELMTKYFELVTDLSLEELAELTEGLKSGAVHPRDAK 303

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVK 358
             +A  +  M HG+E A+ A    +  F      + +    I   E+  G + L+ L+  
Sbjct: 304 MKLAHTLVRMYHGQEAADAAQEHFVTVFQQRALPEDIEEKEIPAAELDNGKIRLIKLLTL 363

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL 393
            GFA S  EARR ++  A+K+N   IS+   +++L
Sbjct: 364 LGFAASNGEARRSIQQGAVKLNEEKISDPNAEVEL 398


>gi|251792712|ref|YP_003007438.1| tyrosyl-tRNA synthetase [Aggregatibacter aphrophilus NJ8700]
 gi|247534105|gb|ACS97351.1| tyrosyl-tRNA synthetase [Aggregatibacter aphrophilus NJ8700]
          Length = 395

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 102/385 (26%), Positives = 177/385 (45%), Gaps = 29/385 (7%)

Query: 10  SILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
            ILSE+  I ++   R L +          +G D TA  +H GH   L  L   Q+ GH+
Sbjct: 17  EILSEQDLIEKLKENRPLRV---------KLGADPTAPDIHLGHTVVLNKLRQFQQFGHE 67

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
            I L+G  T ++GDPS ++ +R  +  +++  N E  K      +     + +     N 
Sbjct: 68  VIFLIGDFTGMVGDPSGKNTTRPPLSREDVLRNAETYKQQIYKILDPQKTRIEF----NS 123

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
            WL  +    ++R + S ++V RML  +  + R    Q ++  EF Y +LQ +D V L  
Sbjct: 124 DWLGKLGTEGMIR-LASNYTVARMLERDDFKKRFSNNQPIAIHEFIYPLLQGHDSVAL-- 180

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLN 248
             +  +++GG+DQ  N++ G +L +        A+T PLL    G  KM K+L   I +N
Sbjct: 181 --EADIELGGTDQKFNLLVGRELQKSAGQKPQVAITLPLLVGLDGEKKMSKSLGNYIGVN 238

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATEI 306
           +   +P   +    +I D  +  +   L+  P++EI ++ +    GK   + K ++A EI
Sbjct: 239 E---APGEMFGKIMSISDDLMWDWYNLLSFRPLTEIAQLKEDVANGKNPRDVKILLAKEI 295

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
               H    A+ A    +  F        MP  +   +     +GL  L+ +AG   ST+
Sbjct: 296 IARFHDEAAADAAEQEFINRFQKGAMPDEMPEFTFEGE-----IGLANLLKEAGLVASTS 350

Query: 367 EARRHLKSNAIKINNSIISNEKLQI 391
           EA R ++   +KI+   + + +L I
Sbjct: 351 EANRMVQQGGVKIDGEKVEDARLVI 375


>gi|86150966|ref|ZP_01069182.1| tyrosyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 260.94]
 gi|315124728|ref|YP_004066732.1| tyrosyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
 gi|85842136|gb|EAQ59382.1| tyrosyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 260.94]
 gi|315018450|gb|ADT66543.1| tyrosyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
          Length = 401

 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 106/361 (29%), Positives = 180/361 (49%), Gaps = 22/361 (6%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   L  + +LQK G     L+G  T  IGDPS +  +R+ +  +++ 
Sbjct: 42  GFDPTAPDLHLGHSVVLTKMAFLQKHGAIVQFLIGDFTGQIGDPSGKSATRKKLDKEQVL 101

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
            N +     + + +     K    +  N TWL  +    ++ E+ S FSV RML  +   
Sbjct: 102 INAK----TYETQVFKVLDKEKTQIKFNSTWLNELGAAGIV-ELTSTFSVARMLERDDFT 156

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R K +  +S  EF Y +LQ YD V L  +    ++MGG+DQ  N++ G  L       K
Sbjct: 157 KRFKEQSPISICEFLYPLLQGYDSVALKSD----IEMGGTDQKFNLLMGRQLQRVYNIGK 212

Query: 221 LFA-LTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
             A +  PLL    G  KM K+L+  I + ++     + +    +I D  +  + + L+ 
Sbjct: 213 EQAVIMMPLLEGLDGVNKMSKSLNNYIGVTEKAN---DMYAKILSISDELMFRYYELLSQ 269

Query: 279 LPMSEIDRMAK--LQGK-EINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQH 335
             + EI ++ K   QG     +AK+ +A EIT   H +EEA  A +     FD  IHSQ+
Sbjct: 270 KSLEEIAQIKKDIEQGNLHPKKAKENLALEITERFHSKEEANNAKSE----FD-RIHSQN 324

Query: 336 MPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
                +++ E+   + L   +V+ G  +ST+ ARR + +NA+ +N+  +S+E++ ++  +
Sbjct: 325 ALPSDMAEFEIQGKIWLAKALVECGLESSTSAARRSISANAVSVNSQKVSDEQMYLEQGE 384

Query: 396 F 396
           +
Sbjct: 385 Y 385


>gi|57505448|ref|ZP_00371376.1| tyrosyl-tRNA synthetase [Campylobacter upsaliensis RM3195]
 gi|57016273|gb|EAL53059.1| tyrosyl-tRNA synthetase [Campylobacter upsaliensis RM3195]
          Length = 402

 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 106/362 (29%), Positives = 183/362 (50%), Gaps = 23/362 (6%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   L  + +LQK G +   L+G  T  IGDPS ++ +R+ +  +E+ 
Sbjct: 42  GFDPTAPDLHLGHSVVLSKMAFLQKHGARVQFLIGDFTGQIGDPSGKNATRKKLSQEEVL 101

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           +N +  +     F      KTD +   N  WL  +    ++ E+ S FSV RML  E   
Sbjct: 102 KNAKTYES--QVFKILDKNKTDIVF--NSKWLNELGAAGIV-ELTSTFSVARMLEREDFT 156

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R + + S+S  EF Y +LQ YD V L  +    ++MGG+DQ  N++ G  L       K
Sbjct: 157 KRFREQSSISICEFLYPLLQGYDSVALKSD----IEMGGTDQKFNLLMGRTLQRIYDAKK 212

Query: 221 LFALT-SPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
             A+   PLL    G  KM K+L+  I + +   +  + +    +I D  +  + + L+ 
Sbjct: 213 EQAIIMMPLLEGLDGVNKMSKSLNNYIGVTE---NAKDIYAKILSISDELMFRYYELLSK 269

Query: 279 LPMSEIDRMAK-LQGKEINE--AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQH 335
             + EI+ + + +Q   ++    K+ +A E+    H +E A++A       FD  +HS +
Sbjct: 270 KSLKEIETIKENIQNGSLHPKIVKENLALELVERFHSKELADEAKAE----FD-RVHSAN 324

Query: 336 MPTISISKDEVSRG-MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
                I+K E+  G + L   +V+ G   ST+ ARR + +N++ +N+  I +E++Q++L 
Sbjct: 325 ALPSEITKFEIGGGSVWLAKALVECGLENSTSAARRAIVANSVSVNSQKIRDEQMQLELG 384

Query: 395 DF 396
           ++
Sbjct: 385 EY 386


>gi|219871769|ref|YP_002476144.1| tyrosyl-tRNA synthetase [Haemophilus parasuis SH0165]
 gi|219691973|gb|ACL33196.1| tyrosyl-tRNA synthetase [Haemophilus parasuis SH0165]
          Length = 396

 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 104/386 (26%), Positives = 182/386 (47%), Gaps = 37/386 (9%)

Query: 10  SILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
            + SE   I ++   R L +          +G D TA  +H GH   L  L   Q  GH+
Sbjct: 18  DVYSEADLIEKLKENRPLRV---------KLGADPTAPDIHLGHTVVLNKLRQFQNFGHE 68

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
            I L+G  T+ +GDPS ++ +R  +  +++  N E  K       K    +   ++ N++
Sbjct: 69  VIFLIGDFTATVGDPSGKNTTRPPLSREDVLRNAETYK---EQIYKILDPQKTRIVFNSD 125

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
            WL  +  + ++R + S ++V RML  +  + R    QS++  EF Y +LQ +D V L  
Sbjct: 126 -WLGELGTVGMIR-LASNYTVARMLERDDFKKRFANNQSIAIHEFIYPLLQGHDSVAL-- 181

Query: 190 NYDCRLQMGGSDQWGNIICGIDL----GERLKTPKLFALTSPLLTTASG-TKMGKTLSGA 244
             +  +++GG+DQ  N++ G +L    G++L+     A+T PLL    G  KM K+L   
Sbjct: 182 --EADIELGGTDQTFNLLIGRELQKAAGQKLQV----AMTLPLLVGLDGEKKMSKSLGNY 235

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM-AKLQ-GKEINEAKKII 302
           I + +    P   +    +I D  +  +   L+  P++EI ++ A ++ GK   + K ++
Sbjct: 236 IGVTE---VPNEMFGKIMSISDELMWDWYNLLSFRPLTEIAQLKADVEAGKNPRDVKILL 292

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFA 362
           A EI    H   +A+ A    +  F        MP  +   +     +GL TL+ +AG  
Sbjct: 293 AKEIIARFHSEADADAAEQEFINRFQKGAMPDEMPEFTFEGE-----IGLATLLKEAGLV 347

Query: 363 TSTNEARRHLKSNAIKINNSIISNEK 388
            ST+EA R  +   +KI+   + + K
Sbjct: 348 PSTSEAIRSAQQGGVKIDGEKVDDVK 373


>gi|78776919|ref|YP_393234.1| tyrosyl-tRNA synthetase [Sulfurimonas denitrificans DSM 1251]
 gi|115305830|sp|Q30SN2|SYY_SULDN RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|78497459|gb|ABB43999.1| tyrosyl-tRNA synthetase [Sulfurimonas denitrificans DSM 1251]
          Length = 399

 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 117/408 (28%), Positives = 191/408 (46%), Gaps = 38/408 (9%)

Query: 14  ERGFIHQISNPRELDILCS---QG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
           +RG    I  PR   +L +   +G   T   G+D TA  LH GH   L  L   QK G +
Sbjct: 10  QRGCAEIIDEPRVEKLLKAYFEKGETYTVKAGFDPTAPDLHLGHTVLLQKLAIFQKYGAR 69

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
              L+G  T+ IGDPS +  +R+++ +++I EN +  K     F      KTD +   N 
Sbjct: 70  VQFLIGDFTAQIGDPSGKSATRKILSTEDILENAKSYKE--QVFKILDASKTDVVF--NS 125

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
            WL ++    ++  + + F+V RML  +    R K   S++  EF Y +LQ YD V L  
Sbjct: 126 EWLNALGASGMIT-LTTTFNVARMLERDDFDKRYKSGTSIAISEFLYPLLQGYDSVHLKS 184

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFA-LTSPLLTTASGT-KMGKTLSGAIWL 247
           +    +++GG+DQ  N++ G  L       K  A L  P+L    G  KM K+L   I +
Sbjct: 185 D----IEVGGTDQKFNLLMGRHLQRSYDVGKEQAVLMVPILEGLDGVQKMSKSLGNYIGV 240

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM------AKLQGKEINEAKKI 301
           ++   +P   +    +I D  +  + + L+T  ++EI+R+        L  K++ E    
Sbjct: 241 SE---NPNEIFGKVLSISDELMWRYYELLSTKTLAEIERLKSGVEAGTLHPKKVKEE--- 294

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGF 361
           +A EIT   H  E A+ A     + FD  +HS +     + +   S  + +   +V    
Sbjct: 295 LAIEITARFHSSESAQNAK----DEFD-RVHSNNQIPTEMDEFSSSEAISITKALVDCNL 349

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
             ST++ARR +K  A++IN   I +E L ++      +G   L  GK+
Sbjct: 350 TPSTSQARRDIKQGAVRINQEKIDDETLSLE------SGEYILQVGKR 391


>gi|332288591|ref|YP_004419443.1| tyrosyl-tRNA synthetase [Gallibacterium anatis UMN179]
 gi|330431487|gb|AEC16546.1| tyrosyl-tRNA synthetase [Gallibacterium anatis UMN179]
          Length = 395

 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 105/393 (26%), Positives = 180/393 (45%), Gaps = 47/393 (11%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           +LSE   I ++   R L I          +G D TA  +H GH   L  L   Q+ GH+ 
Sbjct: 18  VLSEEDLIEKLKENRPLKI---------KLGADPTAPDIHLGHTVVLNKLRQFQQLGHEV 68

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
             L+G  T ++GDPS ++ +R  +  +++  N E  K      +     KT  +   N +
Sbjct: 69  YFLIGDFTGMVGDPSGKNTTRPPLTREDVLRNAETYKQQIYKILD--PEKTHVVF--NSS 124

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           WL  +    ++R + S ++V RML  +  + R    QS++  EF Y +LQ YD V L   
Sbjct: 125 WLGELGTEGMIR-LASQYTVARMLERDDFKKRFSNHQSIAIHEFIYPLLQGYDSVAL--- 180

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNK 249
            +  +++GG+DQ  N++ G +L +        A+T PLL    G  KM K+L   I +++
Sbjct: 181 -EADVELGGTDQKFNLLVGRELQKARGLKPQVAITLPLLEGLDGEKKMSKSLGNYIGVSE 239

Query: 250 EMTSPYNFWQYWRNIDDA------DVVSFAKRLTTLPMSEIDRMAKLQ-----GKEINEA 298
              +P + +    +I D       D++SF           +D +A+L+     G+   + 
Sbjct: 240 ---APDDMFGKVMSISDELMWRWYDLLSF---------RSLDEIAQLKQDVANGRNPRDV 287

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVK 358
           K ++A E+    H +  A+ A    +E F        MP  +   +     M +  L+ +
Sbjct: 288 KILLAKELIERFHDKAAADAAEQTFIERFQKGAMPDEMPEFTFEGE-----MPIANLLKE 342

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
           A   +ST+EA R +K   +KI+   + + KL I
Sbjct: 343 ADLVSSTSEALRMIKQGGVKIDGEKVEDSKLVI 375


>gi|317180539|dbj|BAJ58325.1| tyrosyl-tRNA synthetase [Helicobacter pylori F32]
          Length = 402

 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 104/377 (27%), Positives = 179/377 (47%), Gaps = 34/377 (9%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   +  L  LQ+ G +   L+G  T++IGDP+ ++E+R+ +  +++ 
Sbjct: 44  GFDPTAPDLHLGHTVLIQKLALLQQYGARVKFLIGDFTAMIGDPTGKNETRKPLNREQVL 103

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           EN +     +   I     +    +  N TWL ++    ++ E+ + FSV RML  +   
Sbjct: 104 ENAK----TYEEQIYKILDQKHTEVCFNSTWLDTLGAKGMI-ELCAKFSVARMLERDDFT 158

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R K  + +S +EF Y +LQ YD V +    D  +++GG+DQ  N++ G  L       K
Sbjct: 159 KRYKENRPISIVEFLYPLLQGYDSVAM----DADIELGGNDQKFNLLVGRFLQRAYGLNK 214

Query: 221 LFA-LTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
             + +T PLL    G  KM K+L   + + +E   P   +    ++ D  +  +   L+ 
Sbjct: 215 EQSIITMPLLEGLDGVQKMSKSLGNYVGITEE---PNAMFGKIMSVSDDLMWRYYTLLSA 271

Query: 279 LPMSEIDRMAK------LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIH 332
             + EI+ +        L  K + E    +A EI    +  ++A KA     E F     
Sbjct: 272 KTLEEIEDLKHGILNQTLHPKAVKED---LAGEIVARYYDNDQAIKAK----EQFSKVFS 324

Query: 333 SQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
           +  +P I +  D    G+G+L ++ + GF  ST++ARR ++   +KIN  ++ NE  +  
Sbjct: 325 ANLLPEILLESD-FDEGVGILDVLKQIGFCPSTSQARRDIQGGGVKINQEVVKNESYRF- 382

Query: 393 LQDFDSTGNIKLSFGKK 409
                  GN  +  GKK
Sbjct: 383 -----VKGNYVIQLGKK 394


>gi|294793862|ref|ZP_06758999.1| tyrosine--tRNA ligase [Veillonella sp. 3_1_44]
 gi|294455432|gb|EFG23804.1| tyrosine--tRNA ligase [Veillonella sp. 3_1_44]
          Length = 402

 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 103/361 (28%), Positives = 172/361 (47%), Gaps = 22/361 (6%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  L   Q+ GH+ + ++GG T+ IGDP+ +  +R  +  +E+
Sbjct: 42  LGLDPTAPDIHLGHTVPLRKLRLFQEFGHQVVIVIGGFTARIGDPTGKSVTRPPLTKEEV 101

Query: 100 QENIEKIK-GIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
            +N E  K  IF       T     ++ +N  WL S+ + D+LR + S ++V RM+  + 
Sbjct: 102 LKNAETYKTQIFKVLDPEKT-----IVRDNSEWLESMNFADVLR-LASSYTVARMMERDD 155

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
              R K  + +   EF Y ++Q +D V L  +    ++ GG+DQ  N++ G  L E    
Sbjct: 156 FSKRFKEGRPIGVHEFMYPLMQGHDSVALHAD----VEFGGTDQTFNLLMGRHLQELEGQ 211

Query: 219 PKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT 277
                +T PLL    G  KM K+L   I +++E   P   +    +I D  ++ +   +T
Sbjct: 212 EPQVVITMPLLEGLDGIQKMSKSLGNYIGIDEE---PKEMYGKAMSIPDELMMRYFMLVT 268

Query: 278 TLPMSEIDRMAK-LQGKEIN--EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQ 334
            + + E + M K L+  E++  +AK  +A  I  + HG E A +A       F       
Sbjct: 269 DMSIEEQEDMTKRLESGELHPRDAKMQLARTIVRLYHGEEAALEAEEEFKRVFQQRAMPT 328

Query: 335 HMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
            +P  ++  D  +  + +      AG   S  EARR +K+ A K+N    + E L  KL+
Sbjct: 329 DIPEYAM--DAPTEPIFVPQFCTDAGLTASNGEARRSIKAGAFKVNGEKYTEENL--KLE 384

Query: 395 D 395
           D
Sbjct: 385 D 385


>gi|307720660|ref|YP_003891800.1| tyrosyl-tRNA synthetase [Sulfurimonas autotrophica DSM 16294]
 gi|306978753|gb|ADN08788.1| tyrosyl-tRNA synthetase [Sulfurimonas autotrophica DSM 16294]
          Length = 399

 Score =  124 bits (311), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 107/380 (28%), Positives = 180/380 (47%), Gaps = 40/380 (10%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   L  L   QK G +   L+G  T+ IGDP+ ++ +R+++  ++I 
Sbjct: 41  GFDPTAPDLHLGHTVLLQKLATFQKYGARVQFLIGSFTATIGDPTGKNATRKVLSKEDII 100

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           +NIE       +F      KTD  ++ N+ WL  +   DL+  + S  +V RML  +   
Sbjct: 101 KNIESY--TTQAFKILDESKTD--IVYNDDWLGKMSASDLI-SLASNLTVARMLERDDFS 155

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R K   +++  EF Y +LQ YD V L  +    +++GG+DQ  N++ G  L +     K
Sbjct: 156 KRFKTNVAIATSEFMYPLLQGYDSVYLKSD----IEIGGTDQKFNLLMGRQLQKAYDIKK 211

Query: 221 LFA-LTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYN---------FWQYWRNIDDADV 269
             A L  P+L    G  KM K+L   I ++ +    +           W+Y+  + D  +
Sbjct: 212 QQAVLMMPILEGLDGVQKMSKSLGNYIGVSDKPNDMFGKVLSISDELMWRYFELLSDKSL 271

Query: 270 VSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDM 329
              A+  T +      +  KL  K++ E    +A EIT   H +E AE A       FD 
Sbjct: 272 DEIAELETAV------KEGKLHPKKVKED---LALEITARFHSKEVAENAKVE----FD- 317

Query: 330 SIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKL 389
            +HS+      I++      + +   +++     ST++ARR +K   +KI+   +S++KL
Sbjct: 318 KVHSKSQIPSDIAEFSCDGPIWIAKALLECNMEPSTSQARRDIKQGGVKIDQEKVSDDKL 377

Query: 390 QIKLQDFDSTGNIKLSFGKK 409
           ++      S+G   L  GK+
Sbjct: 378 EL------SSGEYLLQVGKR 391


>gi|254779253|ref|YP_003057358.1| tyrosyl-tRNA synthetase [Helicobacter pylori B38]
 gi|254001164|emb|CAX29123.1| Tyrosyl-tRNA synthetase (Tyrosine--tRNA ligase) (TyrRS)
           [Helicobacter pylori B38]
          Length = 402

 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 104/377 (27%), Positives = 179/377 (47%), Gaps = 34/377 (9%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   +  L  LQ+ G +   L+G  T++IGDP+ ++E+R+ +  +++ 
Sbjct: 44  GFDPTAPDLHLGHTVLIQKLALLQQYGARVKFLIGDFTAMIGDPTGKNETRKPLNREQVL 103

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           EN +     +   I     +    +  N  WL ++    ++ E+ + FSV RML  +   
Sbjct: 104 ENAK----TYEEQIYKILDEKHTEVCFNSAWLDALGAKGMI-ELCAKFSVARMLERDDFA 158

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R K  + +S +EF Y +LQ YD V +    D  +++GG+DQ  N++ G  L       K
Sbjct: 159 KRYKENRPISIVEFLYPLLQGYDSVAM----DADIELGGNDQKFNLLVGRFLQRSYGLNK 214

Query: 221 -LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               +T PLL    G  KM K+L   + + +E   P   +    ++ D  +  +   L+ 
Sbjct: 215 EQSVITMPLLEGLDGVQKMSKSLGNYVGITEE---PNAMFGKIMSVSDDLMWRYYTLLSA 271

Query: 279 LPMSEIDRMAK------LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIH 332
             + EI+ +        L  K + E    +A EI    +  E+A KA     E F     
Sbjct: 272 KTLEEIEDLKHGILNQTLHPKAVKEE---LAGEIVARYYDNEQAIKAK----EQFSKVFS 324

Query: 333 SQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
           +  +P I +S+ +   G+G+L ++ + GF  ST++ARR ++   +KIN  +I +E  +  
Sbjct: 325 ANLLPEI-LSESDFDEGVGILDVLKQIGFCPSTSQARRDIQGGGVKINQEVIKDESYRF- 382

Query: 393 LQDFDSTGNIKLSFGKK 409
                  GN  +  GKK
Sbjct: 383 -----VKGNYVIQLGKK 394


>gi|186477308|ref|YP_001858778.1| tyrosyl-tRNA synthetase [Burkholderia phymatum STM815]
 gi|184193767|gb|ACC71732.1| tyrosyl-tRNA synthetase [Burkholderia phymatum STM815]
          Length = 432

 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 101/364 (27%), Positives = 184/364 (50%), Gaps = 28/364 (7%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  +  LQ  GH  I L+G  TS+IGDPS R+ +R  +  ++I
Sbjct: 74  LGLDPTAPDIHIGHTVVLNKMRQLQDLGHTVIFLIGDFTSLIGDPSGRNATRPPLTREQI 133

Query: 100 QENIEKIKGIF-SSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
           + N    K  F  + +     KT+  +  N  W   +   D + ++ S ++V R+L  E 
Sbjct: 134 ESN---AKTYFEQAALVLDRAKTE--IRYNSEWSMPLG-ADGMIKLASRYTVARILERED 187

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
              R +    +S  EF Y ++Q YD V L    +  L++GG+DQ  N++ G +L ++   
Sbjct: 188 FTKRFQSGVPISIHEFLYPLMQGYDSVAL----NADLELGGTDQKFNLLVGRELQKQYGQ 243

Query: 219 PKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT 277
            +   LT PLL    G  KM K+    + ++++   P + +    +I D  +  + + L+
Sbjct: 244 EQQCILTMPLLEGLDGVEKMSKSKGNYVGISEK---PNDMFGKLMSISDVLMWRYFELLS 300

Query: 278 TLPMSEIDRMAKL--QGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIH--- 332
             PMSEI+   +    G+   + K ++A EI    H + +AE+    A+E F+       
Sbjct: 301 FRPMSEIEGFKREIDGGRNPRDFKVLLAQEIVARFHSQADAER----ALEDFNHRAKGGV 356

Query: 333 SQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
              +PT++++   ++ G     L+ +AG   ST+EA R+++   +KI+ + +S++ L+++
Sbjct: 357 PDDIPTVTLAGAPLAIGQ----LLKQAGLVPSTSEALRNIEQGGVKIDGATVSDKGLKVE 412

Query: 393 LQDF 396
             +F
Sbjct: 413 AGEF 416


>gi|183220957|ref|YP_001838953.1| tyrosyl-tRNA synthetase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Paris)']
 gi|189911052|ref|YP_001962607.1| tyrosyl-tRNA synthetase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167775728|gb|ABZ94029.1| Tyrosine--tRNA ligase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167779379|gb|ABZ97677.1| Tyrosyl-tRNA synthetase (Tyrosine--tRNA ligase; TyrRS) [Leptospira
           biflexa serovar Patoc strain 'Patoc 1 (Paris)']
          Length = 408

 Score =  124 bits (310), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 102/389 (26%), Positives = 187/389 (48%), Gaps = 27/389 (6%)

Query: 15  RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLM 74
           RG +  IS    L+ + S+  +T   G+D TA  LH GH   L  L   Q  GH+   ++
Sbjct: 16  RGTVEIISEAELLEKIKSKPSLTIKAGFDPTAPDLHLGHFVLLRKLKHFQDLGHEVCFML 75

Query: 75  GGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCS 134
           G  T++IGDP+ + E+R+ +  +E+ EN +  +      +     K    +L N  W   
Sbjct: 76  GDFTAMIGDPTGKSETRKRLSKEEVLENSKTYQSQVFKILDPQKIK----ILYNSHWCSE 131

Query: 135 IKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCR 194
           +K+ D+L  + S ++V+RML  +    R K    +S +EF Y ++Q YD V +  +    
Sbjct: 132 LKFEDVLV-LTSKYTVSRMLERDDFTKRHKAGTPISMIEFLYPLVQGYDSVAMKSD---- 186

Query: 195 LQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTS 253
           +++GG+DQ  N++ G DL           +T PLL    G  KM K+L   + +   +  
Sbjct: 187 VELGGTDQKFNMLVGRDLQREYGQKPQAVITLPLLVGLDGVKKMSKSLGNYVGI---IEK 243

Query: 254 PYNFWQYWRNIDDADVVSFAKRLTTLPMSEID------RMAKLQGKEINEAKKIIATEIT 307
           P + +    +I D  + ++ + LT LP++E++      R   L  KE+   K  +A  I 
Sbjct: 244 PIDMYGKIMSISDDLMWNYFELLTDLPLAEVETKKEGIRTKALHPKEV---KTELALLIM 300

Query: 308 TMVHGREEAEKAA---TAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV-KAGFAT 363
             +H +E+  KA    TA     + ++  + +PT ++     +    LL  ++ +  F  
Sbjct: 301 DQLHPKEDNRKAVEEWTAIHNTKNRALPDE-IPTETLDPSYFAEKPPLLVYVLSQLKFIP 359

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIK 392
           S +E RR +++  + ++   I++  L ++
Sbjct: 360 SVSEGRRLIQAGGLYLDEEKITDSSLALE 388


>gi|145220013|ref|YP_001130722.1| tyrosyl-tRNA synthetase [Prosthecochloris vibrioformis DSM 265]
 gi|145206177|gb|ABP37220.1| tyrosyl-tRNA synthetase [Chlorobium phaeovibrioides DSM 265]
          Length = 405

 Score =  124 bits (310), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 96/355 (27%), Positives = 167/355 (47%), Gaps = 17/355 (4%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D +   LH GH   L  L   Q  GH+ I ++G  T++IGDPS + ++R  + ++E 
Sbjct: 44  LGADPSRPDLHLGHSVVLRKLRDFQDLGHEAILIIGDFTAMIGDPSGKSKTRPQLTAEEA 103

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           + N E     F    K    K   +  N++ WL ++ + D++R + S  +V RML  +  
Sbjct: 104 RRNGE---SYFEQASKILDPKKTTICWNSD-WLGAMTFADVIR-LSSHCTVARMLERDDF 158

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R +  + +S  EF Y + QA D V L  +    +++GG+DQ  N++ G DL       
Sbjct: 159 ERRYRSGEPISIHEFLYPLAQAMDSVHLKND----IELGGTDQKFNLLVGRDLQREYGIA 214

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               +T PLL    G  KM K+L  AI  N     P + +    +I D  + ++   L  
Sbjct: 215 PQVCITMPLLVGTGGVEKMSKSLGNAICFND---PPTDMYGRMLSIPDTLITNYCSLLLP 271

Query: 279 LPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPT 338
              ++I  + +    +   AK+++A  I  + +  E AE+A +     F      +++  
Sbjct: 272 PGTADIGSITEESATDPRSAKRMLARNIVALYYSPEAAEEAQSHFDRVFVQKKAPENIEL 331

Query: 339 ISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL 393
             +S  E++    ++ L+V+ G A+S  +ARR ++  AI I+   I      I L
Sbjct: 332 FELSHSEIT----VVDLLVELGAASSKTDARRMIQQKAILIDEERIEEINASITL 382


>gi|94309362|ref|YP_582572.1| tyrosyl-tRNA synthetase [Cupriavidus metallidurans CH34]
 gi|93353214|gb|ABF07303.1| Tyrosyl-tRNA synthetase [Cupriavidus metallidurans CH34]
          Length = 413

 Score =  124 bits (310), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 100/358 (27%), Positives = 173/358 (48%), Gaps = 26/358 (7%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  L  LQ  GH+ I L+G  TS IGDPS R+ +R  +  ++I
Sbjct: 56  LGLDPTAPDIHLGHTVVLNKLRQLQDLGHQVIFLIGDFTSTIGDPSGRNSTRPPLTREQI 115

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           + N +      S  +     +T+  +  N  W C       + ++ + ++V RM+  +  
Sbjct: 116 EANAQTYYRQASLVLD--PARTE--IRYNSEW-CDPLGARGMIQLAAKYTVARMMERDDF 170

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R +    +S  EF Y ++Q YD V L  +    L++GG+DQ  N++ G +L +     
Sbjct: 171 TKRFRSGIPISVHEFLYPLMQGYDSVALKSD----LELGGTDQKFNLLVGRELQKEYGQE 226

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               LT PLL    G  KM K+ +  I + +   +P + +    +I D  +  +   L+ 
Sbjct: 227 SQCILTMPLLVGLDGVEKMSKSKNNYIGVTE---APNDMFGKLMSISDELMWQYYTLLSF 283

Query: 279 LPMSEIDRMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIH---S 333
            PMSEID M      G+   + K  +A EI T  H + +AEK    A+E F+        
Sbjct: 284 RPMSEIDLMKSEVALGRNPRDCKVALAQEIVTRFHSQADAEK----ALEDFNHRARGGVP 339

Query: 334 QHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
             +P +S+        +G+  L+ +A    ST+EA R+++   +KI+ +++S++  ++
Sbjct: 340 DDIPAVSLE----GAPLGIAQLLKQANLVPSTSEANRNIEQGGVKIDGAVVSDKSTKV 393


>gi|218960943|ref|YP_001740718.1| tyrosyl-tRNA synthetase [Candidatus Cloacamonas acidaminovorans]
 gi|167729600|emb|CAO80512.1| tyrosyl-tRNA synthetase [Candidatus Cloacamonas acidaminovorans]
          Length = 400

 Score =  124 bits (310), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 106/379 (27%), Positives = 185/379 (48%), Gaps = 32/379 (8%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G D T   +H GHL  +  +   Q  GH  + ++G  T+ IGDP+ RDESR  + +++++
Sbjct: 42  GIDPTGYDVHLGHLVPIRKMRQFQDLGHIGVIIIGDFTAQIGDPTGRDESRPPLSAEQVK 101

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
            N EK      + +K    K    +     W   +   D+++ +G  F++ + ++ ++ R
Sbjct: 102 RNSEKFMEQLYTVLK----KEQTEVRYQSEWFGKMGMSDVIKLLGK-FTLAQFMAHQTFR 156

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R ++  +L   E  Y +LQ YD V  A N D  +++G ++Q  NI+CG D+       +
Sbjct: 157 QRYEQGLALGMHEILYPVLQGYDSV--AVNSD--VELGATEQKFNILCGRDMQSHFGMEE 212

Query: 221 LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTL 279
             A+ SP+L    G  KMGK+L+  I +      P   +    +I D  ++++    TTL
Sbjct: 213 QVAILSPILIGTDGVNKMGKSLNNYIAV---FDPPTEKYGKVMSIPDNIILNYFYYATTL 269

Query: 280 PMSEIDRMAKLQGKEINEA--KKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMP 337
           P  EI+++ K      N    KK +A EI T+ H  EEA++A  A  + F +      +P
Sbjct: 270 PEEEIEKIKKELESGTNPMLIKKRLAREIVTLYHSAEEAKEAEYAFEKQFSLREVPNDIP 329

Query: 338 TISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
              +SK+       L  L+V +G  ++  EA+R ++  A+ +N           K+  FD
Sbjct: 330 EFVVSKNSCK----LSNLLVDSGICSTNGEAKRLIQGGAVSLNGE---------KITAFD 376

Query: 398 STGNIK----LSFGKKNHI 412
           +  N+K    +  GK+N+I
Sbjct: 377 AVVNLKDGDIIRAGKRNYI 395


>gi|254414535|ref|ZP_05028301.1| tyrosyl-tRNA synthetase [Microcoleus chthonoplastes PCC 7420]
 gi|196178765|gb|EDX73763.1| tyrosyl-tRNA synthetase [Microcoleus chthonoplastes PCC 7420]
          Length = 390

 Score =  124 bits (310), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 90/348 (25%), Positives = 164/348 (47%), Gaps = 30/348 (8%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D T + +H GH   +  L   Q  GH  + ++G  T+ IGDPS + E R+ +  +++
Sbjct: 44  LGIDPTGTDIHLGHSIPVRKLRAFQDAGHTAVLIIGDFTARIGDPSGKSEVRKHLSDEQV 103

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           Q+N +         + + T     +  N+E WL  +   ++L ++ +  +V +ML+ E  
Sbjct: 104 QQNAQTYLDQVRPILDFETPGRLEIRYNSE-WLSKLDLAEIL-DLLATMTVGQMLAKEGF 161

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R K+E  +   EF Y ++Q YD V +  +    +++GG+DQ  NI  G DL      P
Sbjct: 162 AERFKQENPIYLHEFLYPLMQGYDSVAVKAD----VELGGTDQKFNIAVGRDLQRHFGQP 217

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
             F L  P+L    G  KM K+L+  + L +E   P   +Q      D  +  + + LT 
Sbjct: 218 PQFGLLLPILIGTDGVLKMSKSLNNYVGL-REAAQP--MYQKLEGTKDNLLEEYFELLTD 274

Query: 279 LPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPT 338
           L ++E+    +       + ++++A  I T  HG++EA++A                +P 
Sbjct: 275 LSLAELPVNPR-------DRQQLLAWTIVTQYHGQKEADEAKGGGA-----------IPE 316

Query: 339 ISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISN 386
            S+S+ E      L  ++  +G  +S+ E RR +K   +K+    I++
Sbjct: 317 FSLSQVEFP--AKLFYILNASGLCSSSGEGRRQIKGGGVKLEGDRITD 362


>gi|114777315|ref|ZP_01452326.1| tyrosyl-tRNA synthetase [Mariprofundus ferrooxydans PV-1]
 gi|114552460|gb|EAU54943.1| tyrosyl-tRNA synthetase [Mariprofundus ferrooxydans PV-1]
          Length = 394

 Score =  124 bits (310), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 101/355 (28%), Positives = 165/355 (46%), Gaps = 27/355 (7%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   L  L   Q  GH+ + L+G  T  IGDP+ ++E+R  +   E+ 
Sbjct: 42  GFDPTAPDLHLGHTVLLEKLRQFQHCGHQVVFLIGDFTGTIGDPTGKNETRPPLTHDEVL 101

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
            N E  K       K    K   +  N+E WL  +   DL+R I    +V RML  +   
Sbjct: 102 LNAESYK---EQVFKVLDPKQTEVRFNSE-WLGQLTAADLIR-IAGKATVARMLERDDFE 156

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R K  QS++  EF Y ++Q YD V L    D  +++GG+DQ  N++ G  L +     +
Sbjct: 157 KRYKGGQSIAIHEFLYPLVQGYDSVAL----DADVELGGNDQKFNLLMGRQLQDAYGKAQ 212

Query: 221 LFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTL 279
              +T PLL    G  KM K+L+  + + +     +       ++ D  +  + + LT +
Sbjct: 213 QVIMTMPLLEGLDGINKMSKSLNNYVGVAEPAKEQFG---KLMSVSDDLMFKYYELLTDM 269

Query: 280 PMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI 339
            + EI  M  +      EAKK++A  I    HG    E A   A   F+     + +P  
Sbjct: 270 DLDEIRAMHPM------EAKKLLAATIVERFHG----EGAGAQARAGFESQFAKKEIPD- 318

Query: 340 SISKDEVSRGMGLLTLI---VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
            + +  ++   G L ++    +AG   S  EA R +K NA+ I+   ++++ L++
Sbjct: 319 DVPEATLAGEDGALWIVHALTQAGLTASNGEAIRMIKQNALSIDGDKVTDKDLKL 373


>gi|189500737|ref|YP_001960207.1| tyrosyl-tRNA synthetase [Chlorobium phaeobacteroides BS1]
 gi|189496178|gb|ACE04726.1| tyrosyl-tRNA synthetase [Chlorobium phaeobacteroides BS1]
          Length = 405

 Score =  124 bits (310), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 101/356 (28%), Positives = 167/356 (46%), Gaps = 19/356 (5%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D +   LH GH   L  L   Q  GH+ I ++G  T++IGDPS +  +R  + ++E 
Sbjct: 44  LGADPSRPDLHLGHSVVLQKLRDFQDLGHEAILIIGDFTAMIGDPSGKSTTRPQLTAEEA 103

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           +EN    +  F    K    K   +  N + WL  + + D++R + S ++V RML  +  
Sbjct: 104 KEN---GRTYFDQASKILDRKKTTIRYNAD-WLGQMTFNDVIR-LSSHYTVARMLERDDF 158

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R +  + +S  EF Y + Q  D V L  +    +++GG+DQ  N++ G DL       
Sbjct: 159 EKRYRSREPISIHEFLYPLAQGMDSVHLRND----IELGGTDQKFNLLVGRDLQREYGIH 214

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               +T PLL    G  KM K+L  AI  N    +P + +    +I D  + ++   L  
Sbjct: 215 PQVCITMPLLVGTFGQDKMSKSLGNAICFND---TPEDIYGRVLSIPDDLIETYFTLLLP 271

Query: 279 LPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPT 338
            P    +   ++  +   EAK+ +A EI  + H  + A KA     + FD     +  P 
Sbjct: 272 TPERSPESFREMVNESPREAKRTLAKEIVALFHSGDLAVKAE----DHFDRVFVHKKAP- 326

Query: 339 ISISKDEVS-RGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL 393
           + I +   S   + L+ L+V      S  EARR +  NAI+IN++ IS+   ++ L
Sbjct: 327 LEIKEFAFSASSIPLVDLLVALKAVNSKTEARRLISQNAIQINDTKISDINFEVTL 382


>gi|269926819|ref|YP_003323442.1| tyrosyl-tRNA synthetase [Thermobaculum terrenum ATCC BAA-798]
 gi|269790479|gb|ACZ42620.1| tyrosyl-tRNA synthetase [Thermobaculum terrenum ATCC BAA-798]
          Length = 422

 Score =  124 bits (310), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 102/361 (28%), Positives = 171/361 (47%), Gaps = 28/361 (7%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D T + +H GH   L  L   Q  GH  I ++G  T+ +GDPS R ++R  +  +++
Sbjct: 50  LGIDPTVTDIHLGHTVPLRNLRRFQDLGHTAILVLGDFTATVGDPSGRSKARPPLSHEQV 109

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
            EN    K   S  +        A ++ N TWL  +   DL+  IGS  SV RML  E  
Sbjct: 110 LENAATYKEQVSKILDL----ERAEVVYNSTWLAKLTLKDLIF-IGSHISVKRMLEGEYF 164

Query: 160 RSRLKREQSLSFL-EFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
             R +      FL E  Y I+Q  D V +    +  +++GG+DQ  N + G DL      
Sbjct: 165 GRRFEDPDQTVFLHEMFYPIMQGMDSVSI----NADIELGGTDQEFNCLMGRDLQRLYGQ 220

Query: 219 PKLFALTSPLLTTASGT-KMGKTLS---GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAK 274
                +T PLL   +GT KM K+L    G  W  +E       +     + D  +  + +
Sbjct: 221 EPQVVVTFPLLPGLTGTEKMSKSLGNYVGVSWGAQEQ------FNKLMTMSDDHIGIYYR 274

Query: 275 RLTTLPMSEI-DRMAKLQGKEIN--EAKKIIATEITTMVHGREEAEKAA---TAAMECFD 328
            LT +P+ EI +++  +Q  + +  E KK + TEI +  HG E A +AA       E   
Sbjct: 275 LLTDVPIEEIEEKIQAIQNGQADPREVKKQLVTEIVSQFHGPEAARRAAEDYERYAEIRR 334

Query: 329 MSIHSQHMPT-ISISKDEVS-RGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISN 386
               +  +P+ I ++K +++  G  L  ++V  G A+S +EA+R ++   +++   ++ +
Sbjct: 335 TGGKTDQLPSNIPVAKIKLNPEGTRLTHILVTTGMASSNSEAKRLIRQGGVRLRGEVVKD 394

Query: 387 E 387
           +
Sbjct: 395 D 395


>gi|148926262|ref|ZP_01809947.1| tyrosyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CG8486]
 gi|205356288|ref|ZP_03223054.1| tyrosyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CG8421]
 gi|145845433|gb|EDK22526.1| tyrosyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CG8486]
 gi|205345893|gb|EDZ32530.1| tyrosyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CG8421]
          Length = 401

 Score =  124 bits (310), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 104/361 (28%), Positives = 182/361 (50%), Gaps = 22/361 (6%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   L  + +LQK G     L+G  T  IGDPS +  +R+ +  +++ 
Sbjct: 42  GFDPTAPDLHLGHSVVLTKMAFLQKHGAIVQFLIGDFTGQIGDPSGKSATRKKLDKEQVL 101

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
            N +     + + +     K    +  N TWL  +    ++ E+ S FSV RML  +   
Sbjct: 102 INAK----TYETQVFKVLDKEKTQIKFNSTWLNELGAAGIV-ELTSTFSVARMLERDDFT 156

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R K +  +S  EF Y +LQ YD V L  +    ++MGG+DQ  N++ G  L       K
Sbjct: 157 KRFKEQSPISICEFLYPLLQGYDSVALKSD----IEMGGTDQKFNLLMGRQLQRVYNIGK 212

Query: 221 LFA-LTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
             A +  PLL    G  KM K+L+  I + ++     + +    +I D  +  + + L+ 
Sbjct: 213 EQAVIMMPLLEGLDGVNKMSKSLNNYIGVTEKAN---DMYAKILSISDELMFRYYELLSQ 269

Query: 279 LPMSEIDRMAK-LQGKEIN--EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQH 335
             + EI ++ K ++   ++  +AK+ +A EIT   H +EEA  A +     FD  IHSQ+
Sbjct: 270 KSLEEIAQIKKDIEQSNLHPKKAKENLALEITERFHSKEEANNAKSE----FD-RIHSQN 324

Query: 336 MPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
                +++ E+   + L   +V+ G  +ST+ ARR + +NA+ +N+  +S+E++ ++  +
Sbjct: 325 ALPSDMAEFEIQGKIWLAKALVECGLESSTSAARRSISANAVSVNSQKVSDEQMYLEQGE 384

Query: 396 F 396
           +
Sbjct: 385 Y 385


>gi|153872691|ref|ZP_02001508.1| Tyrosyl-tRNA synthetase, class Ib [Beggiatoa sp. PS]
 gi|152070841|gb|EDN68490.1| Tyrosyl-tRNA synthetase, class Ib [Beggiatoa sp. PS]
          Length = 400

 Score =  124 bits (310), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 112/389 (28%), Positives = 188/389 (48%), Gaps = 40/389 (10%)

Query: 18  IHQISNPRELDI-LCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGG 76
           +H+I    EL   L S   +    G+D TA  LH GH   L  L   Q+ GH  + L+G 
Sbjct: 14  VHEILLEEELRTKLASGKPLRIKAGFDPTAPDLHLGHTVLLNKLRQFQQLGHTILFLIGD 73

Query: 77  GTSIIGDPSFRDESRRMMRSQEIQENI----EKIKGIFSSFIKYGTGKTDALMLNNETWL 132
            T +IGDP+ ++ +R+ + S+E+QEN     E+I  I    I         +  N+E W+
Sbjct: 74  FTGMIGDPTGKNVTRQSLSSEEVQENARTYQEQIYKILDPDIT-------QICFNSE-WM 125

Query: 133 CSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYD 192
             +    L++ + +  +V RML  +    R   EQ ++  EF Y ++Q YD V L  +  
Sbjct: 126 NKMDASGLIK-LAAQHTVARMLERDDFHKRYNGEQPIAIHEFLYPLIQGYDSVALQAD-- 182

Query: 193 CRLQMGGSDQWGNIICGIDLGERL-KTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKE 250
             +++GG+DQ  N++ G +L +   +TP++  LT P+L    G  KM K+L   I +++ 
Sbjct: 183 --VELGGTDQKFNLLVGRELQKHYGQTPQV-VLTMPILEGLDGVQKMSKSLGNYIGIDEP 239

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIATEITT 308
               +       ++ D  +  + + L+    +EI+   KL  +G    + K   A EI  
Sbjct: 240 ADEMFG---KLMSVSDILMWRYIELLSFKTPAEIENWKKLVEEGANPRDIKVEFAQEIVA 296

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMP------TISISKDEVSRGMGLLTLIVKAGFA 362
             H    +++AA  A E F        MP      T++I  +E+     +  L+ +AG  
Sbjct: 297 RFH----SQQAAIQAYEQFVARFKRHEMPEDMPEMTLTIETEEIP----IANLLKQAGLT 348

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQI 391
            ST+EA R +K NA+KI+   I++  L+I
Sbjct: 349 PSTSEAIRMIKQNAVKIDGEKITDRDLKI 377


>gi|300705146|ref|YP_003746749.1| tyrosyl-tRNA synthetase [Ralstonia solanacearum CFBP2957]
 gi|299072810|emb|CBJ44165.1| tyrosyl-tRNA synthetase [Ralstonia solanacearum CFBP2957]
          Length = 423

 Score =  123 bits (309), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 99/363 (27%), Positives = 179/363 (49%), Gaps = 26/363 (7%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  +  LQ  GH+ I L+G  TS IGDPS R+ +R  +  ++I
Sbjct: 66  LGLDPTAPDIHIGHTVVLNKMRQLQDLGHQVIFLIGDFTSTIGDPSGRNATRPPLTREQI 125

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           + N +      S  +     KT+  +  N  W   +    ++ ++ + ++V RM+  +  
Sbjct: 126 EANAQTYYRQASMVLD--PSKTE--IRYNSEWSDPLGARGMI-QLAARYTVARMMERDDF 180

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R K    +S  EF Y ++Q YD V L  +    L++GG+DQ  N++ G +L +     
Sbjct: 181 TKRYKAGVPISVHEFLYPLMQGYDSVALKSD----LELGGTDQKFNLLVGRELQKEYGQE 236

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               LT PLL    G  KM K+    + + +   +P   +    +I D  + ++   L+ 
Sbjct: 237 PQCILTMPLLVGLDGVEKMSKSKGNYVGIAE---APGEMFGKLMSISDDLMWTYFTLLSF 293

Query: 279 LPMSEIDRMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIH---S 333
            PM+EI+ M +    G+   + K ++A EI +  H + +AE+    A+E F+        
Sbjct: 294 RPMAEIEMMKQEVALGRNPRDCKVLLAQEIISRFHSQADAER----ALEDFNHRARGGVP 349

Query: 334 QHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL 393
             +P I +S   +    G+  L+ +AG   ST++A R+++   +KI+ ++IS++ L+++ 
Sbjct: 350 DDIPQIELSGAPI----GIAQLLKQAGLCPSTSDANRNIEQGGVKIDGAVISDKGLKVEA 405

Query: 394 QDF 396
             F
Sbjct: 406 GTF 408


>gi|229815735|ref|ZP_04446060.1| hypothetical protein COLINT_02784 [Collinsella intestinalis DSM
           13280]
 gi|229808651|gb|EEP44428.1| hypothetical protein COLINT_02784 [Collinsella intestinalis DSM
           13280]
          Length = 404

 Score =  123 bits (309), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 99/365 (27%), Positives = 176/365 (48%), Gaps = 33/365 (9%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D T+  LH GH   L  +   Q  GH+   ++G GT+ IGDPS ++ +R  +  +E+
Sbjct: 38  LGVDPTSPDLHLGHAVPLRKMRQFQDLGHRVTLIIGNGTATIGDPSGKNSTRPQLTQEEV 97

Query: 100 QENIEKIKGIFSSFIKYGTGKTDA---LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSF 156
           + N        ++++       D     +++N  W+  +   +LL  I S F+V R+L  
Sbjct: 98  EANA-------ATYVSQAMKILDPEKTTIVHNGDWMFPMDLKELL-SIASKFTVARILER 149

Query: 157 ESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL 216
           +    R + +  ++  EF Y I+QAYD V++    +  ++MGGSDQ  N++ G +L E++
Sbjct: 150 DDFTKRYQSQTPIALHEFLYPIMQAYDSVKI----EADVEMGGSDQLFNLLAGRELMEKM 205

Query: 217 KTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKR 275
                 ALT PLL    GT KM K+    I L     +P + +    +I D  +  + + 
Sbjct: 206 GMEPQIALTMPLLEGTDGTRKMSKSYGNYIGLTD---APADMFGKTMSIPDEMIGKYYRL 262

Query: 276 LTTLPMSEIDRM-AKLQGKEIN--EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIH 332
            ++L  +E+D + A L     N  E K+ +  ++ T  H    + + A AA   FD  +H
Sbjct: 263 ASSLAPAEVDAIDAALADGSANPYELKRALGRDLVTTYH----SAEDAVAAEAEFD-RVH 317

Query: 333 SQH-MPT----ISISKDEVSRGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISN 386
             H +PT    +S+       G+  L  +++ AG   S  +ARR +    +K++   I+ 
Sbjct: 318 KNHDLPTDIAEVSVEISVNDEGLVYLPAVLQAAGLVPSAGQARRDIDGGGVKLDGEAIAP 377

Query: 387 EKLQI 391
           +   +
Sbjct: 378 KTYNV 382


>gi|315638888|ref|ZP_07894060.1| tyrosine--tRNA ligase [Campylobacter upsaliensis JV21]
 gi|315481106|gb|EFU71738.1| tyrosine--tRNA ligase [Campylobacter upsaliensis JV21]
          Length = 402

 Score =  123 bits (309), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 106/362 (29%), Positives = 183/362 (50%), Gaps = 23/362 (6%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   L  + +LQK G +   L+G  T  IGDPS ++ +R+ +  +E+ 
Sbjct: 42  GFDPTAPDLHLGHSVVLSKMAFLQKHGARVQFLIGDFTGQIGDPSGKNATRKKLSQEEVL 101

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           +N +  +     F      KTD +   N  WL  +    ++ E+ S FSV RML  E   
Sbjct: 102 KNAKTYES--QVFKILDKNKTDIVF--NSKWLNELGAAGIV-ELTSTFSVARMLEREDFT 156

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R + + S+S  EF Y +LQ YD V L  +    ++MGG+DQ  N++ G  L       K
Sbjct: 157 KRFREQSSISICEFLYPLLQGYDSVALKSD----IEMGGTDQKFNLLMGRTLQRIYDVKK 212

Query: 221 LFALT-SPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
             A+   PLL    G  KM K+L+  I + +   +  + +    +I D  +  + + L+ 
Sbjct: 213 EQAIIMMPLLEGLDGVNKMSKSLNNYIGVTE---NAKDIYAKILSISDELMFRYYELLSK 269

Query: 279 LPMSEIDRMAK-LQGKEINE--AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQH 335
             + EI+ + + +Q   ++    K+ +A E+    H +E A +A       FD  +HS +
Sbjct: 270 KSLKEIETIKENIQNGSLHPKIVKENLALELVERFHSKELANEAKAE----FD-RVHSAN 324

Query: 336 MPTISISKDEVSRG-MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
                I++ E+S G + L   +V+ G   ST+ ARR + +N++ +N+  I +E++Q++L 
Sbjct: 325 ALPSEIAEFELSGGSVWLAKALVECGLENSTSAARRAIVANSVSVNSQKIKDEQMQLELG 384

Query: 395 DF 396
           ++
Sbjct: 385 EY 386


>gi|297182040|gb|ADI18214.1| tyrosyl-tRNA synthetase [uncultured gamma proteobacterium
           HF0200_40H22]
          Length = 405

 Score =  123 bits (309), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 96/352 (27%), Positives = 170/352 (48%), Gaps = 17/352 (4%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G+D TA  LH GH   +  +   Q+ GH+ + L+G  T +IGDPS ++ +R  + ++EI
Sbjct: 44  VGFDPTAPDLHLGHTVIINKMRQFQELGHEVVFLIGDFTGMIGDPSGKNVTRPPLTAEEI 103

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           + N    K     F      KT  L+  N  W   +    ++R + S  +V RML  +  
Sbjct: 104 ESNATTYKA--QVFRILDPEKT--LVEFNSKWCSELGAEGIIR-LASRHTVARMLERDDF 158

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R K  Q ++  EF Y ++Q YD V L  +    ++MGG+DQ  N++ G +L ++   P
Sbjct: 159 SKRYKSGQPIAIHEFLYPLMQGYDSVALKTD----VEMGGTDQKFNLLVGRELQKQYGQP 214

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               +T PLL    G  KM K+L   + +     +P + +    ++ D  +  + + L+ 
Sbjct: 215 SQVVMTLPLLEGLDGVQKMSKSLGNTVGITD---APDDMFGKLMSVSDDLMWRYFELLSF 271

Query: 279 LPMSEIDRMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM 336
             + EI+++ +  + G    + K  +A EI    H   +  KA    +E F        +
Sbjct: 272 KSLPEIEKLHESVVSGANPRDVKFELAREIVDRFHTAGDGSKAQQRFVERFSQGGVPDDL 331

Query: 337 PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEK 388
              ++S D    G+G+ + I +AG A+ST+EA R +K  A++ +   + + K
Sbjct: 332 EEKTLSSD--GDGLGIASAIKQAGLASSTSEAIRLIKQGAVRFDGERLEDPK 381


>gi|209526728|ref|ZP_03275251.1| tyrosyl-tRNA synthetase [Arthrospira maxima CS-328]
 gi|209492860|gb|EDZ93192.1| tyrosyl-tRNA synthetase [Arthrospira maxima CS-328]
          Length = 415

 Score =  123 bits (309), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 101/378 (26%), Positives = 175/378 (46%), Gaps = 28/378 (7%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D T S +H GH      L   Q  GH  + ++G  T+ IGDP+ + E RR +  +++
Sbjct: 58  LGIDPTGSDIHLGHSIIFRKLRAFQDAGHTAVLIIGDFTARIGDPTGKSEVRRQLTPEQV 117

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSI---KYIDLLREIGSFFSVNRMLSF 156
           ++N +         + + T     +  N+E WL  +   K +DLL    S  +V +ML+ 
Sbjct: 118 EQNAQTYLEQLRPILDFDTPGRLEIRRNSE-WLSKLDLAKTLDLL----SRMTVGQMLAK 172

Query: 157 ESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL 216
           E    R ++E  +   EF Y ++Q YD V +    +  +++GG+DQ  N+  G DL    
Sbjct: 173 EGFSLRFEQENPIYLHEFLYPLMQGYDSVAV----EADVELGGTDQKFNLAVGRDLQRYF 228

Query: 217 KTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKR 275
                F L  P+L    G  KM K+L   + L+++   P   +     + D  +  + + 
Sbjct: 229 GQTPQFGLLMPILIGTDGVQKMSKSLGNYVGLSED---PLTMYSKLEKVPDGLIAQYFEL 285

Query: 276 LTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDM-SIHSQ 334
           LT  P++E+    +       + +K++A +I T  HG   A  A  AA+      +  ++
Sbjct: 286 LTDYPLAELPENPR-------DRQKLLALDIVTQYHGEAAALAAQKAAVNLVQGDATRAE 338

Query: 335 HMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
            +P  S+S  EV     L  ++  +G   S +EARR +   A+KI+   I +  L +   
Sbjct: 339 AVPEFSLS--EVEFPAKLFYILSASGLCKSGSEARRQIAGGAVKIDGDRIEDPNLVVASA 396

Query: 395 DFDSTGNIKLSFGKKNHI 412
           + +  G + L  GKK  I
Sbjct: 397 E-ELKGRV-LQVGKKKFI 412


>gi|302877605|ref|YP_003846169.1| tyrosyl-tRNA synthetase [Gallionella capsiferriformans ES-2]
 gi|302580394|gb|ADL54405.1| tyrosyl-tRNA synthetase [Gallionella capsiferriformans ES-2]
          Length = 399

 Score =  123 bits (309), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 98/354 (27%), Positives = 171/354 (48%), Gaps = 25/354 (7%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   L  +  LQ  GH  + L+G  T +IGDP+ ++ +R  +  +++ 
Sbjct: 39  GFDPTAPDLHLGHTVLLNKMRQLQDLGHHALFLIGDFTGMIGDPTGKNATRPPLSREQVL 98

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           EN +  +     F      KT+ +   N TW+     +DL+R + +  +V +ML  +   
Sbjct: 99  ENAQSYRD--QVFKVLDPEKTEIVF--NSTWMDKFSAVDLIR-LAATHTVAQMLERDDFA 153

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R K  Q ++  EF Y ++Q YD V L  +    L++GG+DQ  N++ G ++      P 
Sbjct: 154 KRYKGGQPIAIHEFIYPLVQGYDSVALKAD----LELGGTDQKFNLLMGREMQRHYGQPA 209

Query: 221 LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTL 279
              LT PLL    G  KM K+L   I +     +P + +    +I D  +  + + L+  
Sbjct: 210 QCILTMPLLEGLDGVNKMSKSLGNYIGITD---APQDMFGKLMSISDVLMWRYLELLSFR 266

Query: 280 PMSEID--RMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDM----SIHS 333
            +SEI   R     G+   + K ++A EI    H + +AE    AA+E FD      +  
Sbjct: 267 SLSEIASWRAEVEGGRNPRDIKVLLAQEIVARFHSQRDAE----AALEEFDARFRKGVLP 322

Query: 334 QHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNE 387
             MP ++++  +    + L  L+ +AG    T+EA R +   A+K++   ++++
Sbjct: 323 DDMPEMTVAAPDGVISVPL--LLRQAGLVDGTSEAMRMIVQGAVKLDGERVNDK 374


>gi|126660180|ref|ZP_01731298.1| tyrosyl-tRNA synthetase [Cyanothece sp. CCY0110]
 gi|126618545|gb|EAZ89296.1| tyrosyl-tRNA synthetase [Cyanothece sp. CCY0110]
          Length = 407

 Score =  123 bits (308), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 97/380 (25%), Positives = 177/380 (46%), Gaps = 31/380 (8%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D T + +H GH      L   Q  GH  + ++G  T+ IGDP+ + E R+ + S+++
Sbjct: 49  LGIDPTGTDIHLGHSIPFRKLRAFQDAGHTAVVIIGDFTAQIGDPTGKSEVRKQLTSEQV 108

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           + N E         + + T     +  N+E WL  +  +  ++E+ +  +V +ML+ E  
Sbjct: 109 KSNAENYLEQLRPILDFDTPGRLEIRYNSE-WLKELN-LAKIQELLATMTVGQMLAKEGF 166

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R K+E  +   EF Y ++Q YD V +    D  +++GG+DQ  NI  G DL       
Sbjct: 167 AERYKQENPIFLHEFLYPLMQGYDSVMI----DADVELGGTDQKFNIAVGRDLQRHFGKK 222

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
             F L  P+L    G+ KM K+L+  + L ++  S Y+  +      DA +  + + LT 
Sbjct: 223 PQFGLLLPILLGTDGSQKMSKSLNNYVGLKEDELSMYSKLE---KTPDAIIKDYFELLTN 279

Query: 279 LPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQ---- 334
           LP+ ++    +       + +K++A EI T  H    ++KAA  A +  +  + ++    
Sbjct: 280 LPLDQLPENPR-------DCQKLLALEIVTQFH----SQKAAITAQKTAEDLVKNKGTGA 328

Query: 335 --HMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
              +P   +S  E      L  ++  +G   S+ E RR ++  A++++   IS+  + I 
Sbjct: 329 TDAVPEYDLSNVEFP--AKLFYILNASGLCGSSGEGRRQIQGGAVRLDGEKISD--VNIT 384

Query: 393 LQDFDSTGNIKLSFGKKNHI 412
             + +      L  GKK  I
Sbjct: 385 FDNLEQLSGKVLQVGKKKFI 404


>gi|226479904|emb|CAX73248.1| tyrosyl-tRNA synthetase [Schistosoma japonicum]
          Length = 347

 Score =  123 bits (308), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 72/202 (35%), Positives = 110/202 (54%), Gaps = 9/202 (4%)

Query: 138 IDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQM 197
           +D+ R +   F ++ +L  ESV+ R+    ++   EF Y ILQA DF+ L +NYDC  Q+
Sbjct: 2   MDISRNVLPHFKLSELLEKESVKLRMDSGNTMDLGEFFYPILQALDFLYLHENYDCYAQV 61

Query: 198 GGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS------GAIWLNKEM 251
           GG DQ GNI CG++L  R    ++F LT PL+TT  G K+GK++S        IWL    
Sbjct: 62  GGHDQIGNITCGLNLIYRKLGRRVFGLTVPLITTPDGQKLGKSVSISDCGMDTIWLMGRK 121

Query: 252 TSPYNFWQYWRNIDDADVVS-FAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATEITT 308
             PY+F+Q   N+ D  +     ++LT     EI+++     K+ +    +K++A E+T 
Sbjct: 122 LKPYHFYQKILNLPDGIISDKLLRQLTFFAPDEINQLLTNHEKDPSRRTVQKVLAEELTL 181

Query: 309 MVHGREEAEKAATAAMECFDMS 330
           +VHG    + A  A    F MS
Sbjct: 182 LVHGAYALQAAELATRIFFPMS 203


>gi|284098530|ref|ZP_06385916.1| Tyrosyl-tRNA synthetase [Candidatus Poribacteria sp. WGA-A3]
 gi|283830468|gb|EFC34659.1| Tyrosyl-tRNA synthetase [Candidatus Poribacteria sp. WGA-A3]
          Length = 407

 Score =  123 bits (308), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 100/387 (25%), Positives = 182/387 (47%), Gaps = 37/387 (9%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH+  +  L   Q+ GH+ I L+G  T +IGDP+   E+R+++  +++ 
Sbjct: 45  GFDPTAPDLHLGHIVLIQKLRHFQELGHEAIFLIGDFTGMIGDPTGVSETRKVLSKEQVL 104

Query: 101 ENIEKI-KGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
            N +   + IF +     T      +  N  W+  ++  D++ E+ S +++ RML  +  
Sbjct: 105 ANAKTYERQIFKTLDPEKT-----RVEFNSRWMRDMRAQDIV-ELCSHYNLARMLERDDF 158

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R + ++ +   EF Y ++Q YD V L  +    +++GG+DQ  N++ G DL       
Sbjct: 159 SKRYREQKPIGVHEFLYPLVQGYDSVALEAD----VELGGTDQTFNLLVGRDLQRDWGQV 214

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               +T PLL    G  KM K+   AI L  E   P + +    +I D  +  + + LT+
Sbjct: 215 PQIVITMPLLEGTDGVRKMSKSFGNAIALEDE---PSDMFGKIMSISDDLMFRYYELLTS 271

Query: 279 LPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMP- 337
               ++D + +   K   EAK  +A  + T  HG +    A   A E F+     +  P 
Sbjct: 272 ---EDLDAVKQRHPK---EAKLDLAGAMVTRYHGAD----AGRQAKEDFEQKFRKREFPE 321

Query: 338 ----TISIS----KDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKL 389
               T++++     D  +  +GL+ L+++ G   S  EARR +   A+ +N     +   
Sbjct: 322 QPDVTVTLTAADFSDPNNPSIGLVDLLMRTGLLPSKGEARRLIAQGAVVVNEERCQDSTA 381

Query: 390 QIKLQDFDSTGNIKLSFGKKNHIICHL 416
            + LQ   S  + ++  GK+ + +  +
Sbjct: 382 VLPLQ---SNESYQMKIGKRKYALVQV 405


>gi|194333540|ref|YP_002015400.1| tyrosyl-tRNA synthetase [Prosthecochloris aestuarii DSM 271]
 gi|194311358|gb|ACF45753.1| tyrosyl-tRNA synthetase [Prosthecochloris aestuarii DSM 271]
          Length = 406

 Score =  123 bits (308), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 103/357 (28%), Positives = 169/357 (47%), Gaps = 17/357 (4%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D +   LH GH   L  L   Q  GH+ I ++G  T++IGDPS + ++R  + +QE 
Sbjct: 44  LGADPSRPDLHLGHSVVLRKLRDFQDLGHEAILIIGDFTAMIGDPSGKSKTRPQLSAQEA 103

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           +EN E     F    K    +   +  N+E WL  + + D++R + S ++V RML  +  
Sbjct: 104 RENGE---TYFEQASKILDPEKTTICYNSE-WLGKMTFSDVIR-LSSHYTVARMLERDDF 158

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R +  + +S  EF Y + Q  D V L  +    +++GG+DQ  N++ G DL       
Sbjct: 159 ERRYQSCEPISIHEFLYPLAQGMDSVHLKND----IELGGTDQKFNLLVGRDLQREYHID 214

Query: 220 KLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               +T PLL    G  KM K+L  AI       S  + +    +I D+ + ++ K L  
Sbjct: 215 PQVCITMPLLVGTFGDEKMSKSLGNAISFT---DSAQDVYGKTLSIPDSLIETWFKLLVP 271

Query: 279 LPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPT 338
            P   I    ++  +   EAK+ +A E+  + H   +A KA     E FD     +  P 
Sbjct: 272 QPRQSIKLFMEIIRQNPREAKRTLARELVALYHCDTDAVKAE----EHFDRVFVQKKAPE 327

Query: 339 ISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
                   S  M L+ L+ +     S +EARR ++ NAI+I++  IS+   +++L D
Sbjct: 328 NIEVFTFRSSTMQLVELLGELQAVGSKSEARRLIQQNAIQIDDEKISSIDYEVELND 384


>gi|325578247|ref|ZP_08148382.1| tyrosine--tRNA ligase [Haemophilus parainfluenzae ATCC 33392]
 gi|325159983|gb|EGC72112.1| tyrosine--tRNA ligase [Haemophilus parainfluenzae ATCC 33392]
          Length = 395

 Score =  123 bits (308), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 106/381 (27%), Positives = 173/381 (45%), Gaps = 29/381 (7%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           ILSE   I ++   R L I          +G D TA  +H GH   L  L   Q+ GH+ 
Sbjct: 18  ILSEADLIEKLKENRPLKI---------KLGADPTAPDIHLGHTVVLNKLRQFQQLGHEV 68

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
             L+G  T ++GDPS ++ +R  +  +++  N E  K       K    +   ++ N+E 
Sbjct: 69  YFLIGDFTGMVGDPSGKNTTRPPLSREDVLRNAETYK---EQIYKILDPQKTKIVFNSE- 124

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           WL  +    ++R + S ++V RML  +  + R    Q ++  EF Y +LQ +D V L   
Sbjct: 125 WLGKLGTEGMIR-LASNYTVARMLERDDFKKRFGNNQPIAIHEFIYPLLQGHDSVAL--- 180

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNK 249
            +  +++GG+DQ  N++ G +L +        A+T PLL    G  KM K+L   I +  
Sbjct: 181 -EADVELGGTDQKFNLLVGRELQKSAGQKPQVAITLPLLVGLDGEKKMSKSLGNYIGVT- 238

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATEIT 307
              +P + +    +I D  +  +   L+  P++EI  +      GK   + K ++A EI 
Sbjct: 239 --DAPSDMFGKIMSISDELMWDWYNLLSFRPLTEIAELKAEVANGKNPRDVKILLAKEII 296

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
              H    AE A    +  F        MP  +   +     +GL TL+ +AG   ST+E
Sbjct: 297 ARFHDEAAAEAAEQEFINRFQKGAMPDEMPEFTFEGE-----IGLATLLKEAGLVPSTSE 351

Query: 368 ARRHLKSNAIKINNSIISNEK 388
           A R  K   +KIN   + + K
Sbjct: 352 AIRSAKQGGVKINGEKVEDMK 372


>gi|218247683|ref|YP_002373054.1| tyrosyl-tRNA synthetase [Cyanothece sp. PCC 8801]
 gi|257060980|ref|YP_003138868.1| tyrosyl-tRNA synthetase [Cyanothece sp. PCC 8802]
 gi|218168161|gb|ACK66898.1| tyrosyl-tRNA synthetase [Cyanothece sp. PCC 8801]
 gi|256591146|gb|ACV02033.1| tyrosyl-tRNA synthetase [Cyanothece sp. PCC 8802]
          Length = 407

 Score =  123 bits (308), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 98/381 (25%), Positives = 174/381 (45%), Gaps = 26/381 (6%)

Query: 17  FIHQI-SNPRE--LDILCSQ--GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           F HQ  SN RE  L+ L  Q    +   +G D T S +H GH      L   Q  GH  +
Sbjct: 21  FPHQPDSNNREENLEQLLKQCDRPLRVKLGIDPTGSDIHLGHSIPFRKLRMFQDAGHTAV 80

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            ++G  T+ IGDP+ + E R+ +  +++Q N +         + + T     +  N++ W
Sbjct: 81  VIIGDFTAQIGDPTGKSEVRKQLTPEQVQANAKNYLEQLHPILDFDTPGRLEIRYNSQ-W 139

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L  +  +  ++E+ +  +V +ML+ E    R K+E  +   EF Y ++Q YD V +    
Sbjct: 140 LSQLN-LAKIQELLATMTVGQMLAKEGFAERFKQENPIFLHEFLYPLMQGYDSVMI---- 194

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKE 250
           D  +++GG+DQ  NI  G DL         F L  P+L    G+ KM K+L+  + L + 
Sbjct: 195 DADVELGGTDQKFNIAVGRDLQRHFGKKPQFGLLLPILIGTDGSQKMSKSLNNYVGLKE- 253

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMV 310
              P + +       DA +  + + LT   +  +    +       + +K +A EI +  
Sbjct: 254 --GPLSMYSKLEKTPDALIKEYFELLTNFSLDTLPENPR-------DCQKQLAVEIVSQF 304

Query: 311 HGREEAEKAATAAMECFDMSI--HSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
           HG++ A  A   A E     I   +  +P   +S+ E      L  ++  +G   S+ + 
Sbjct: 305 HGKDAALLAQKTAEELVTQGIGTSTDAVPEYELSQVEFP--AKLFYILSASGLCESSGDG 362

Query: 369 RRHLKSNAIKINNSIISNEKL 389
           RR L+  A++I+ + +++  L
Sbjct: 363 RRQLQGGAVRIDGTRVTDPNL 383


>gi|114319599|ref|YP_741282.1| tyrosyl-tRNA synthetase [Alkalilimnicola ehrlichii MLHE-1]
 gi|114225993|gb|ABI55792.1| tyrosyl-tRNA synthetase [Alkalilimnicola ehrlichii MLHE-1]
          Length = 399

 Score =  123 bits (308), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 99/364 (27%), Positives = 167/364 (45%), Gaps = 37/364 (10%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   +  L   Q  GH+   L+G  T +IGDPS +  +R  +  +E++
Sbjct: 39  GFDPTAPDLHLGHTVLINKLRQFQDLGHEVYFLIGDFTGMIGDPSGKSATRPPLTREEVR 98

Query: 101 ENIEKI-KGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           +N     + IF       T      ++ N  W+      D++R + S  +V RML  +  
Sbjct: 99  DNARTYEEQIFQVLDPERTQ-----VVFNSDWMNDFSAADMIR-LASHHTVARMLERDDF 152

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R    Q ++  EF Y ++Q YD V L  +    +++GG+DQ  N++ G +L +     
Sbjct: 153 HKRYAARQPIAIHEFLYPLVQGYDSVALKAD----VELGGTDQKFNLLVGRELQKAYGQS 208

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYN---------FWQYWRNIDDADV 269
               LT PLL    G  KM K+L   + + +     +           W+Y+       +
Sbjct: 209 PQTVLTMPLLEGLDGVQKMSKSLGNYVGIKEPAEEMFGKLMSISDDLMWRYFL------L 262

Query: 270 VSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECF 327
           +SF       P SEI+R+ +   +G+   + K  +A EI T  H    A +A    +  F
Sbjct: 263 LSFR------PESEIERLRRDVAEGRNPRDVKFELAEEIVTRFHDARAAARAREVFIARF 316

Query: 328 DMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNE 387
                 + MP  ++  D+   G+ L  L+  AG   ST++ARR LK  A++I+   + ++
Sbjct: 317 RKGAMPEEMPEHTLPADDG--GLALDRLLKGAGLVASTSDARRMLKQGAVRIDGERVEDQ 374

Query: 388 KLQI 391
           +L +
Sbjct: 375 RLVV 378


>gi|89896576|ref|YP_520063.1| tyrosyl-tRNA synthetase [Desulfitobacterium hafniense Y51]
 gi|89336024|dbj|BAE85619.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 410

 Score =  123 bits (308), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 93/350 (26%), Positives = 165/350 (47%), Gaps = 17/350 (4%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D +A  +H GH   L  +  +Q  GH+ + ++G  T  IGDPS + + R  +  +++
Sbjct: 42  LGLDPSAPDIHLGHAVVLRKIKQMQDLGHEAVIVIGDFTGKIGDPSGKAKGRTALSDEQV 101

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           +EN    +  F    K    +   +  N+E WL  + + D+L+ + +  +V RML  +  
Sbjct: 102 KEN---ARTYFEQIFKVLDKEKTTVRYNSE-WLSKLNFEDVLK-LAATTTVARMLERDDF 156

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
           + R      +   EF Y ++QAYD V L  +    +++GG+DQ  NI+ G  L + +  P
Sbjct: 157 QKRFGSNIPIGIHEFFYPLMQAYDSVTLKAD----IELGGTDQTFNILMGRTLQKAMGQP 212

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
           +  A+  PLL    G  KM K+L   I + +   +P  F +    + D  ++ + +  T 
Sbjct: 213 QQIAMFMPLLEGLDGVEKMSKSLGNYIGVYE--PAPVMFKKVM-EVSDPLILKYFELATD 269

Query: 279 LPMSEID--RMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM 336
                I+  R+   QGK   + K  +A  IT + H  ++   A       F        +
Sbjct: 270 EHPDRIEAFRLELAQGKNPRDVKYALAEIITRLYHTEQDVMTAKAYYEAAFSKKTIPAQI 329

Query: 337 PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISN 386
           P + +     SR M L+ L+V++GF  S  E RR ++   +++N   IS+
Sbjct: 330 PVLPVKAR--SRLMELVPLLVQSGFTASNGEFRRLVQQGGVQLNQQKISD 377


>gi|283954835|ref|ZP_06372351.1| tyrosyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 414]
 gi|283793675|gb|EFC32428.1| tyrosyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 414]
          Length = 401

 Score =  123 bits (308), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 105/361 (29%), Positives = 180/361 (49%), Gaps = 22/361 (6%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   L  + +LQK G     L+G  T  IGDPS +  +R+ +  +++ 
Sbjct: 42  GFDPTAPDLHLGHSVILTKMAFLQKHGAIVQFLIGDFTGQIGDPSGKSATRKKLNKEQVL 101

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
            N +     + + +     K    +  N TWL  +    ++ E+ S FSV RML  +   
Sbjct: 102 INAK----TYETQVFKVLDKEKTQIKFNSTWLNELGATGIV-ELTSTFSVARMLERDDFT 156

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R K +  +S  EF Y +LQ YD V L  +    ++MGG+DQ  N++ G  L       K
Sbjct: 157 KRFKEQSPISICEFLYPLLQGYDSVALKSD----IEMGGTDQKFNLLMGRQLQRVYNIGK 212

Query: 221 LFA-LTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
             A +  PLL    G  KM K+L+  I + ++     + +    +I D  +  + + L+ 
Sbjct: 213 EQAVIMMPLLEGLDGVNKMSKSLNNYIGVTEKAN---DMYAKILSISDELMFRYYELLSQ 269

Query: 279 LPMSEIDRMAK--LQGK-EINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQH 335
             + EI ++ +   QG     +AK+ +A EIT   H +EEA+ A +     FD  IHSQ+
Sbjct: 270 KSLEEIAQIKRDIEQGSLHPKKAKENLALEITERFHSKEEADNAKSE----FD-RIHSQN 324

Query: 336 MPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
                +++ E+   + L   +V+ G  +ST+ ARR + +NAI +N+  +S+ ++ ++  +
Sbjct: 325 ALPSDMAEFEIQGKIWLAKALVECGLESSTSAARRSISANAISVNSQKVSDGQMHLEQGE 384

Query: 396 F 396
           +
Sbjct: 385 Y 385


>gi|150020085|ref|YP_001305439.1| tyrosyl-tRNA synthetase [Thermosipho melanesiensis BI429]
 gi|149792606|gb|ABR30054.1| tyrosyl-tRNA synthetase [Thermosipho melanesiensis BI429]
          Length = 398

 Score =  123 bits (308), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 96/360 (26%), Positives = 169/360 (46%), Gaps = 20/360 (5%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D +   LH GH   L  L   Q  GH  I ++G  T +IGDP+ R+ +R M+  +E+
Sbjct: 37  LGVDPSRPDLHLGHAVVLKKLKEFQDLGHHVILIIGDFTGMIGDPTGRNITRPMLSEKEV 96

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           ++N E       +F      KT+ +  NNE WL  +K+ D++R  G  ++V RML  +  
Sbjct: 97  RKNAETYAK--QAFKILDESKTE-VRFNNE-WLGKMKFADVVRLAGK-YTVARMLERDDF 151

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             RL   Q +S  EF Y + QAYD V +  +    +++GG+DQ  N++ G  + E     
Sbjct: 152 SKRLSEGQPISIAEFLYPLAQAYDSVAIKAD----VELGGTDQLFNLLVGRKVQEEYGLK 207

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               +T P++    G  KM K+    I    E   P + +    +I D  +V + + +T 
Sbjct: 208 PQIVMTMPIIEGTDGKLKMSKSYDNYIAFTDE---PNDMYGKVMSIPDELIVKYMRLVTD 264

Query: 279 LPMSEIDRMAKL-QGKEIN--EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQH 335
           +P  EI R  KL +  ++N  + K  +A EI    +    A++A    ++ F        
Sbjct: 265 IPEEEIVRYEKLIKESKVNPRDVKMRLAREIVKFFYNENAAKEAEENFIKVFRKKELPDE 324

Query: 336 MPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           MP I     + +    ++ ++V      S +EA+R +    +K +   + + K  + +++
Sbjct: 325 MPEIKFENGKYN----IVDVLVAVKATQSRSEAKRVVNQGGVKFDGKKVESFKEDVTIEN 380


>gi|262377634|ref|ZP_06070854.1| tyrosyl-tRNA synthetase [Acinetobacter lwoffii SH145]
 gi|262307393|gb|EEY88536.1| tyrosyl-tRNA synthetase [Acinetobacter lwoffii SH145]
          Length = 408

 Score =  123 bits (308), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 98/373 (26%), Positives = 170/373 (45%), Gaps = 24/373 (6%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           I+SE   + ++   R L I           G+D TA  LH GH   +  L   Q  GH+ 
Sbjct: 25  IISEEDLLKKLKQNRPLKIKA---------GFDPTAPDLHLGHTVLINKLKVFQDLGHEV 75

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           + L+G  T++IGDP+ +  +R  +  +++ EN +  +     F      KT  +   N  
Sbjct: 76  LFLIGDYTAMIGDPTGKSATRPPLSREQVLENAKTYQE--QVFKILDPDKTKVVF--NSE 131

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           W       DL+ ++ S  +V RML  +    R   +Q ++  EF Y ++Q YD V L   
Sbjct: 132 WFAQKTAADLI-QLASQQTVARMLERDDFTKRYNNQQPIAIHEFLYPLVQGYDSVAL--- 187

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNK 249
            +  +++GG+DQ  N++ G  L  R        +T P+L    G  KM K+L   I +  
Sbjct: 188 -EADVELGGTDQTFNLLMGRTLQGRYNQEAQVCITVPILEGLDGVNKMSKSLGNYIGV-- 244

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATEIT 307
              +P   +Q   ++ DA +  +   L+   + EI ++ K   +G+   E KKI+A E+ 
Sbjct: 245 -FDAPGAMYQKVLSMPDALIERYFDLLSFKTIEEIQQLLKEVAEGRNPQEVKKILALELV 303

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
              HG E A  A   A          +  P ++IS+ E    + + +++ +AG   +  +
Sbjct: 304 ERFHGAEAAANAHKGAGNIITEGELPEGTPEVTISRGEFGGEIFITSILREAGLTKNAAQ 363

Query: 368 ARRHLKSNAIKIN 380
           A+  L   A+K++
Sbjct: 364 AKDALGRGAVKVD 376


>gi|315634402|ref|ZP_07889689.1| tyrosine--tRNA ligase [Aggregatibacter segnis ATCC 33393]
 gi|315476992|gb|EFU67737.1| tyrosine--tRNA ligase [Aggregatibacter segnis ATCC 33393]
          Length = 395

 Score =  122 bits (307), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 104/384 (27%), Positives = 177/384 (46%), Gaps = 29/384 (7%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           ILSE+  I ++   R L +          +G D TA  +H GH   L  L   Q+ GH+ 
Sbjct: 18  ILSEQDLIEKLKENRPLRV---------KLGADPTAPDIHLGHTVVLNKLRQFQQLGHEV 68

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
             L+G  T ++GDPS ++ +R  +  +++  N E  K       K    +   ++ N+E 
Sbjct: 69  YFLIGDFTGMVGDPSGKNTTRPPLSREDVLRNAETYK---QQIYKILDPQKTRIVFNSE- 124

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           WL  +    ++R + S ++V RML  +  + R    Q ++  EF Y +LQ +D V L   
Sbjct: 125 WLGKLGTEGMIR-LASNYTVARMLERDDFKKRFSNNQPIAIHEFIYPLLQGHDSVAL--- 180

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNK 249
            +  +++GG+DQ  N++ G +L +        A+T PLL    G  KM K+L   I + +
Sbjct: 181 -EADVELGGTDQKFNLLVGRELQKSAGQKPQVAITLPLLVGLDGEKKMSKSLGNYIGVTE 239

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATEIT 307
              +P   +    +I D  +  +   L+  P++EI ++      GK   + K ++A EI 
Sbjct: 240 ---APSEMFGKIMSISDDLMWDWYNLLSFRPLAEIAQLKADVANGKNPRDVKILLAKEII 296

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
              H    AE A    +  F        MP  +   +     +GL  L+ +AG   ST+E
Sbjct: 297 ARFHDDAAAEAAEQEFINRFQKGAMPDDMPEFTFESE-----IGLANLLKEAGLVASTSE 351

Query: 368 ARRHLKSNAIKINNSIISNEKLQI 391
           A R ++   +KI+   + + KL I
Sbjct: 352 ANRMVQQGGVKIDGEKVEDAKLVI 375


>gi|295696870|ref|YP_003590108.1| tyrosyl-tRNA synthetase [Bacillus tusciae DSM 2912]
 gi|295412472|gb|ADG06964.1| tyrosyl-tRNA synthetase [Bacillus tusciae DSM 2912]
          Length = 413

 Score =  122 bits (307), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 97/361 (26%), Positives = 173/361 (47%), Gaps = 22/361 (6%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  L   Q  GH+   ++G  T  IGDP+ + E+RR +  +++
Sbjct: 52  LGLDPTAPDIHLGHTVVLQKLRQFQDLGHEVYLVIGDFTGRIGDPTDKSETRRQLTEEQV 111

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           + N +  +     F     G+T  +   N TWL  + + +++R + +  +V RML  E  
Sbjct: 112 RANAKTYEEQL--FKVLDPGRTHVVF--NSTWLAPLTFAEVIR-LAASTTVARMLEREDF 166

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R      +S  EF Y ++Q YD V L  +    +++GG+DQ  N++ G  L +     
Sbjct: 167 HKRFYGNLPISLHEFFYPLMQGYDSVALRAD----VELGGTDQKFNLLMGRTLQKEFGQS 222

Query: 220 KLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
           +  A+  PLL    G  KM K+L   I L+     P + +    +I D+  V + +  T 
Sbjct: 223 QQAAVMVPLLEGLDGEKKMSKSLGNYIGLD---DPPRDMYGKAMSIPDSLTVKYFELATD 279

Query: 279 LPMSEIDRMAK--LQGK-EINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQH 335
           L   E+DR+     +G+    +AK  +A  +  M HG      AA  A   F      + 
Sbjct: 280 LSNDELDRLKGDLTEGRLHPRDAKMRLAKTLVRMYHG----PNAAEDAEHHFRTIFQERQ 335

Query: 336 MPTISISKDEVSRG-MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
           +P+  I + ++  G + ++ L+V+ G A S  EARR ++   +++++  I +   +I+ +
Sbjct: 336 LPS-DIEERQIPPGPVWIVRLLVENGLAGSNGEARRLIEQGGVRVDDERIDSPDREIEPR 394

Query: 395 D 395
           +
Sbjct: 395 E 395


>gi|293603319|ref|ZP_06685747.1| tyrosine--tRNA ligase [Achromobacter piechaudii ATCC 43553]
 gi|292818229|gb|EFF77282.1| tyrosine--tRNA ligase [Achromobacter piechaudii ATCC 43553]
          Length = 409

 Score =  122 bits (307), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 103/380 (27%), Positives = 179/380 (47%), Gaps = 25/380 (6%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  +  LQ  GH  I L+G  TS IGDPS R+ +R  +  ++I
Sbjct: 50  LGLDPTAPDIHLGHTVVLNKMRQLQDLGHNVIFLIGDFTSTIGDPSGRNSTRPPLTREQI 109

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           + N +      S  +     +T+  +  N  W C       + ++ S ++V RM+  E  
Sbjct: 110 ESNAKTYYAQASLVLD--PARTE--IRYNSEW-CDPLGARGMIQLASRYTVARMMEREDF 164

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R K    +S  EF Y ++Q YD V L  +    L++GG+DQ  N++ G +L +     
Sbjct: 165 TKRFKGGIPISVHEFLYPLMQGYDSVALKSD----LELGGTDQKFNLLVGRELQKEYGQE 220

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               LT PLL    G  KM K+    I +++   SP + +    +I D  +  + + L+ 
Sbjct: 221 PQCILTMPLLVGTDGVEKMSKSKGNYIGISE---SPDSMFGKLMSISDTLMWRYFELLSF 277

Query: 279 LPMSEIDRMAKLQ--GKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM 336
             + +I  + +    G+   +AK ++A EI T  H  + AE+A  +    F      + M
Sbjct: 278 RSLEDIAALKQETDGGRNPRDAKVMLAQEIITRFHSAKAAEEALASFEARFRDGAIPEDM 337

Query: 337 PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
           P ++I    V    G+L L+ +AG   S +EA+R+++   +++N   + ++ LQ+     
Sbjct: 338 PEVNIGGAPV----GILKLLREAGLVASGSEAQRNVEQGGVRVNGDRVEDKSLQL----- 388

Query: 397 DSTGNIKLSFGKKNHIICHL 416
            + G   +  GK+     +L
Sbjct: 389 -AAGTYVVQVGKRKFARVNL 407


>gi|317051289|ref|YP_004112405.1| tyrosyl-tRNA synthetase [Desulfurispirillum indicum S5]
 gi|316946373|gb|ADU65849.1| tyrosyl-tRNA synthetase [Desulfurispirillum indicum S5]
          Length = 404

 Score =  122 bits (307), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 103/377 (27%), Positives = 170/377 (45%), Gaps = 30/377 (7%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   +  L   Q  GH+   L+G  T++IGDPS + E+RRM+  +++ 
Sbjct: 41  GFDPTAPDLHLGHTVLMQKLRHFQLLGHEIHFLIGDFTAMIGDPSGKSETRRMLTREDVL 100

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
            N E  K     F      KT  +   N  WL  +  I  + E+ +  +V RML  +  +
Sbjct: 101 ANAETYKA--QVFKILDPEKTRVVF--NSHWLYELD-IRAMMELAAKTTVARMLERDDFQ 155

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
           +R +    +S +EF Y + Q YD V +  +    +++GG+DQ  N++ G  L  R    +
Sbjct: 156 NRYRSGGEISLVEFFYPLFQGYDSVAMKAD----VELGGTDQKFNLLMGRTLQRRYGQEE 211

Query: 221 LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYN-FWQYWRNIDDADVVSFAKRLTT 278
              +T P+L    G  KM K+L   I +    T P N  +    +I D  +  + + L+ 
Sbjct: 212 QIVITMPILEGTDGVNKMSKSLGNYIGV----TEPANEMFGKVMSISDDLMFRYFELLSD 267

Query: 279 LPMSEIDRMAK------LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIH 332
             +++I+ + +      L  KE+   K  +  EI    HG    E+AA    + F    +
Sbjct: 268 RSLADIEALRQGIASGSLHPKEV---KVTLGREIVDRFHGAGAGEEAARHFEQVFARGEN 324

Query: 333 SQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
            + MP   +     +    + T I   GFA S  EARR ++   + ++ S I +   +  
Sbjct: 325 PEEMPVFEVPLGATADKR-ICTFIASVGFAKSNGEARRLMEQGGVSLDGSAICDSHAE-- 381

Query: 393 LQDFDSTGNIKLSFGKK 409
              F   G   L  GK+
Sbjct: 382 ---FQVPGECVLKVGKR 395


>gi|297171886|gb|ADI22874.1| tyrosyl-tRNA synthetase [uncultured gamma proteobacterium
           HF0500_32L01]
          Length = 392

 Score =  122 bits (307), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 100/361 (27%), Positives = 172/361 (47%), Gaps = 21/361 (5%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G+D TA  LH GH   +  +   Q  GH+ I L+G  T +IGDPS +  +R  +   EI
Sbjct: 31  VGFDPTAPDLHLGHTVVVNKMRQFQDFGHEIIFLIGDFTGMIGDPSGKSTTRPPLSRDEI 90

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           ++N    +       K    K   +  N+  W   +    L+R + + ++V R+L  +  
Sbjct: 91  EQNAVTYR---EQVFKILDPKKTRIEFNS-VWGNELGAEGLIR-LAARYTVARILERDDF 145

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
            +R +  + ++  EF Y ++Q YD V L  +    +++GG+DQ  N++ G +L ++   P
Sbjct: 146 STRYRNGEPIAIHEFLYPLMQGYDSVALKVD----VELGGTDQKFNLLVGRELQKQYGQP 201

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               LT PLL    G  KM K+L   + + +   SP   +    +I D  +  +   L+ 
Sbjct: 202 PQIVLTMPLLEGLDGVRKMSKSLDNYVGITE---SPDEMFGKLMSISDDLMWRYFDLLSL 258

Query: 279 LPMSEID--RMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM 336
             ++E++  +M  ++G    + K I+A EI    H   +A +A     E F        M
Sbjct: 259 RNVTELEQLKMDAVEGVNPRDIKYILAGEIVERFHSASDARRAK----EEFVNRFQKGEM 314

Query: 337 PTISISKDEVSRG--MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
           P   + K   SRG  M + T+I  AG   ST+EA R LK  A++I+   +++   +I + 
Sbjct: 315 PARIVEKVVNSRGEEMPIATVIKVAGLVASTSEALRMLKQGAVRIDGERVTDRDRKIGVG 374

Query: 395 D 395
           D
Sbjct: 375 D 375


>gi|147677355|ref|YP_001211570.1| tyrosyl-tRNA synthetase [Pelotomaculum thermopropionicum SI]
 gi|146273452|dbj|BAF59201.1| tyrosyl-tRNA synthetase [Pelotomaculum thermopropionicum SI]
          Length = 407

 Score =  122 bits (307), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 99/363 (27%), Positives = 172/363 (47%), Gaps = 19/363 (5%)

Query: 36  VTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMR 95
           +T  +G D TA  +H GH   L  L   Q  GH+ + ++G  T+ IGDP+ + E+RR + 
Sbjct: 38  LTVKLGLDPTAPDIHLGHTVVLQKLKQFQDLGHQVVLILGDFTARIGDPTGKTETRRQLT 97

Query: 96  SQEIQENIEKI-KGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRML 154
            +++  N     + IF    +  T      ++ N  WL  + +  ++ E+ S ++V RML
Sbjct: 98  EEQVLANARTYERQIFKILDRDKTK-----VVFNSQWLAPLTFAQVI-ELASKYTVARML 151

Query: 155 SFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
             +    R K    +S  EF Y ++Q YD V L  +    L++GG+DQ  N++ G  L +
Sbjct: 152 ERDDFARRFKECLPISIHEFFYPLMQGYDSVALKAD----LEIGGTDQKFNLLMGRTLQK 207

Query: 215 RLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFA 273
                   A+  P+L    G  KM K+L   I +N+    P   +    ++ D  ++ + 
Sbjct: 208 EYGQEPQVAVMMPILEGLDGVNKMSKSLGNYIGINE---PPREMYGKTMSLPDELMIRYF 264

Query: 274 KRLTTLPMSEIDRM-AKLQGKEIN--EAKKIIATEITTMVHGREEAEKAATAAMECFDMS 330
           + +T + + E+  + A L+  E++  +AK  +A EI T  HG E A  A       F   
Sbjct: 265 ELVTAISLEELKTIEAGLKSGEMHPRDAKMRLAREIVTQYHGPEAARAAEEEFKRVFQQK 324

Query: 331 IHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKL 389
                +P   ++   +  G + L  L+  AG A ST+EARR ++   +KI+   + +   
Sbjct: 325 DLPDELPGFKVTAGMLEDGAIWLPRLMAMAGLAGSTSEARRLIQQGGVKIDGRKVEDPNY 384

Query: 390 QIK 392
            +K
Sbjct: 385 SLK 387


>gi|307297746|ref|ZP_07577552.1| tyrosyl-tRNA synthetase [Thermotogales bacterium mesG1.Ag.4.2]
 gi|306917006|gb|EFN47388.1| tyrosyl-tRNA synthetase [Thermotogales bacterium mesG1.Ag.4.2]
          Length = 397

 Score =  122 bits (307), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 109/401 (27%), Positives = 189/401 (47%), Gaps = 29/401 (7%)

Query: 15  RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLM 74
           R  +  IS    L  L S+  +   +G D +   LH GH   L  L   QK GH+ + ++
Sbjct: 12  RNHVSLISEEELLRKLKSKRSLRVKLGVDPSRPDLHLGHAVVLRKLRHFQKFGHQVVLII 71

Query: 75  GGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCS 134
           G  T+ IGDPS R ++R M+  +E + N E      +   K    +   +  N+E WL +
Sbjct: 72  GDFTARIGDPSGRSKTRPMLSREEAKINAESYS---TQAFKILDRELTEIRFNSE-WLDA 127

Query: 135 IKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCR 194
           + + D++R + S ++V RM+       R +  + +   EF Y + QAYD V +  +    
Sbjct: 128 MSFEDVIR-LSSKYTVARMMERHDFARRYEENEPIGISEFLYPLAQAYDSVVVKAD---- 182

Query: 195 LQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTS 253
           +++GG DQ+ N++ G  + E         LT PL+    G  KM K+    I  +    +
Sbjct: 183 VEIGGDDQFFNLVVGRKIQEEHGLEAQAILTVPLIEGTDGKLKMSKSYDNYIAFD---DT 239

Query: 254 PYNFWQYWRNIDDADVVSFAKRLT---TLPMSEIDRMAKLQGKEIN--EAKKIIATEITT 308
           P + +    +I D   + + + LT    + +SEI+   K++ K +N  + K  +  EIT+
Sbjct: 240 PRDMFGKLMSIPDTLTLKYFRLLTDKSEVELSEIE--TKIKSKSVNPRDLKLELGVEITS 297

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
             +G E A  A    ++ F        +P I IS + VS    ++ L+V     +S +EA
Sbjct: 298 QFYGEETALNARDEFIKIFRNKELPGEIPEIKISTESVS----VVDLLVSHANISSRSEA 353

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
           RR +    +K+N+ ++++    I++ D D      L  GKK
Sbjct: 354 RRLIDQGGVKVNDEVLNDIHSVIEISDGDV-----LRIGKK 389


>gi|22297594|ref|NP_680841.1| tyrosyl-tRNA synthetase [Thermosynechococcus elongatus BP-1]
 gi|81744029|sp|Q8DMR1|SYY_THEEB RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|22293771|dbj|BAC07603.1| tyrosyl tRNA synthetase [Thermosynechococcus elongatus BP-1]
          Length = 408

 Score =  122 bits (307), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 99/376 (26%), Positives = 173/376 (46%), Gaps = 24/376 (6%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G D T S +H GH   L  L   Q  GH  + ++G  T+ IGDP+ + E R+ +  +E+ 
Sbjct: 49  GIDPTGSEIHLGHSIVLRKLRQFQDAGHCAVLIIGDFTAQIGDPTGKSEVRKQLTPEEVA 108

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
            N++         + + T     +  N+E WL  +    +L  +G+  +V +ML+ E   
Sbjct: 109 ANVQTYLEQVRPILDFETPGRLEIRYNSE-WLAKLDLRKVLELLGT-MTVGQMLAKEGFA 166

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R  +E  +   EF Y ++Q YD V +A +    +++GG+DQ  NI  G DL    + P 
Sbjct: 167 ERYAKETPIFLHEFLYPLMQGYDSVAVAAD----VELGGTDQKFNIAVGRDLQRHFRLPT 222

Query: 221 L-FALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
           + F L  P+L    G  KM K+L   + L +   S Y+  +    I DA V  + + LT 
Sbjct: 223 VQFGLLMPILVGTDGVQKMSKSLGNYVALTESAASMYSKLE---KIPDALVNQYIELLTD 279

Query: 279 LPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEA--EKAATAAMECFDMSIHSQHM 336
           LP+  +    +       + +K +A  + +  HG+E A   +A  AA+     +  +  +
Sbjct: 280 LPLDSLPTHPR-------DRQKALALAVVSQYHGQELALQTQAELAAIVTQGQTAQAGSI 332

Query: 337 PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
           P  S+   E    + L  ++       S++EARR ++   +++N   I++  +   L   
Sbjct: 333 PEYSLG--EFQFPVKLTYVLSHTKLCPSSSEARRQIQGGGVRLNGEKITD--VDFTLTAP 388

Query: 397 DSTGNIKLSFGKKNHI 412
           +   N  L  GKK  +
Sbjct: 389 EPYVNQVLQVGKKKFL 404


>gi|308182932|ref|YP_003927059.1| tyrosyl-tRNA synthetase [Helicobacter pylori PeCan4]
 gi|308065117|gb|ADO07009.1| tyrosyl-tRNA synthetase [Helicobacter pylori PeCan4]
          Length = 402

 Score =  122 bits (307), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 103/377 (27%), Positives = 179/377 (47%), Gaps = 34/377 (9%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   +  L  LQ+ G +   L+G  T++IGDP+ ++E+R+ +  +++ 
Sbjct: 44  GFDPTAPDLHLGHTVLIQKLALLQQYGARVKFLIGDFTAMIGDPTGKNETRKPLNREQVL 103

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           EN +     +   I     +    +  N TWL ++    ++ E+ + FSV RML  +   
Sbjct: 104 ENAK----TYEEQIYKILDEKHTEVCFNSTWLDALGAKGMI-ELCAKFSVARMLERDDFT 158

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R K  + +S +EF Y +LQ YD V +  +    +++GG+DQ  N++ G  L       K
Sbjct: 159 KRYKENRPISIVEFLYPLLQGYDSVAMGAD----IELGGNDQKFNLLVGRFLQRAYGLNK 214

Query: 221 LFA-LTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
             + +T PLL    G  KM K+L   + + +E   P   +    ++ D  +  +   L+ 
Sbjct: 215 EQSIITMPLLEGLDGVQKMSKSLGNYVGITEE---PNAMFGKIMSVSDDLMWRYYTLLSA 271

Query: 279 LPMSEIDRMAK------LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIH 332
             + EI+ +        L  K + E    +A EI    +  ++A KA     E F     
Sbjct: 272 KTLEEIEDLKHGILNQTLHPKAVKED---LAGEIVARYYDNDQAFKAK----EQFSKVFS 324

Query: 333 SQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
           +  +P I +  D    G+G+L ++ + GF  ST++ARR ++   +KIN  ++ NE  +  
Sbjct: 325 ANLLPEILLESD-FDEGVGILDVLKQIGFCPSTSQARRDIQGGGVKINQEVVKNESYRF- 382

Query: 393 LQDFDSTGNIKLSFGKK 409
                  GN  +  GKK
Sbjct: 383 -----VKGNYVIQLGKK 394


>gi|320354886|ref|YP_004196225.1| tyrosyl-tRNA synthetase [Desulfobulbus propionicus DSM 2032]
 gi|320123388|gb|ADW18934.1| tyrosyl-tRNA synthetase [Desulfobulbus propionicus DSM 2032]
          Length = 404

 Score =  122 bits (307), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 105/374 (28%), Positives = 183/374 (48%), Gaps = 25/374 (6%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   L  L   Q  GH+   L+G  T +IGDP+ + ++R  +  ++++
Sbjct: 43  GFDPTAPDLHLGHTVLLQKLRHFQLLGHEVNFLIGDFTGLIGDPTGKSDTRPPLTPEDVK 102

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
            N E  K     F      KT  +   N TWL  +   +++R + S  +V RML  +  +
Sbjct: 103 RNAETYKE--QVFKILDPQKTKVVF--NSTWLGQLSSYEMIR-LASELTVARMLERDDFK 157

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE-RLKTP 219
            R +  + +S  EF Y ++Q YD V +  +    +++GG+DQ  N++ G DL   R + P
Sbjct: 158 KRFESNRPISIHEFLYPLIQGYDSVAMKAD----VELGGTDQLFNVLMGRDLQRSRGQEP 213

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
           ++  LT PLL    G  KM K+L   I +++    P + +    +I D  +  + + L+ 
Sbjct: 214 QV-VLTMPLLEGLDGVNKMSKSLGNYIGISE---PPDSIFGKIMSISDDLMFRYYELLSD 269

Query: 279 LPMSEIDRM-AKLQGKEIN-EAKKI-IATEITTMVHGREEAEKAATAAMECFDMSIHSQH 335
           L + EI  +  K+   E++ +A K+ +A E+ T  H RE AE A     + F      + 
Sbjct: 270 LSLEEIQALKTKIARGELHPKAVKVQLAKEMVTRFHDREAAENAERNFEQVFARHELPED 329

Query: 336 MPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           +  + ++  E    + +  L++ AG   ST++ RR ++ +A+ I    IS+    +    
Sbjct: 330 IEEVRLAVAEAE--IWVPKLLLDAGLVKSTSDGRRMIQQHAVTIEGEKISDINAVVP--- 384

Query: 396 FDSTGNIKLSFGKK 409
             + G I L  GK+
Sbjct: 385 --TKGEILLKVGKR 396


>gi|284050939|ref|ZP_06381149.1| tyrosyl-tRNA synthetase [Arthrospira platensis str. Paraca]
          Length = 415

 Score =  122 bits (307), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 107/398 (26%), Positives = 186/398 (46%), Gaps = 31/398 (7%)

Query: 23  NPRE---LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTS 79
           NP E     +  S G +   +G D T S +H GH      L   Q  GH  + ++G  T+
Sbjct: 38  NPEENLGRRLALSSGPLRIKLGIDPTGSDIHLGHSIIFRKLRAFQDAGHTAVLIIGDFTA 97

Query: 80  IIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSI---K 136
            IGDP+ + E RR +  +++++N +         + + T     +  N+E WL  +   K
Sbjct: 98  RIGDPTGKSEVRRQLTPEQVEKNAQTYLDQLRPILDFDTPGRLEIRRNSE-WLSKLDLAK 156

Query: 137 YIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQ 196
            +DLL    S  +V +ML+ E    R ++E  +   EF Y ++Q YD V +  +    ++
Sbjct: 157 TLDLL----SRMTVGQMLAKEGFSLRFEQENPIYLHEFLYPLMQGYDSVAVQAD----VE 208

Query: 197 MGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPY 255
           +GG+DQ  N+  G DL         F L  P+L    G  KM K+L   + L+++  + Y
Sbjct: 209 LGGTDQKFNLAVGRDLQRYFGQTPQFGLLMPILIGTDGVQKMSKSLGNYVGLSEDALTMY 268

Query: 256 NFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREE 315
           +  +    I D+ +  + + LT  P++E+    +       + +K++A +I T  HG   
Sbjct: 269 SKLE---KIPDSLIEQYFELLTDYPLAELPENPR-------DRQKLLALDIVTQYHGEAA 318

Query: 316 AEKAATAAMECFDM-SIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKS 374
           A  A  AA+      +  ++ +P  S+S  EV     L  ++  +G   S +EARR +  
Sbjct: 319 ALAAQNAALNLVQGDATRAEAVPEFSLS--EVEFPAKLFYILSASGLCKSGSEARRQIAG 376

Query: 375 NAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
            A+KI+   I ++ L +   + +  G + L  GKK  I
Sbjct: 377 GAVKIDGDRIEDDNLVVASAE-EVKGRV-LQVGKKKFI 412


>gi|297170828|gb|ADI21848.1| tyrosyl-tRNA synthetase [uncultured gamma proteobacterium
           HF0130_25M15]
          Length = 404

 Score =  122 bits (306), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 110/416 (26%), Positives = 188/416 (45%), Gaps = 48/416 (11%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           IL E+ F+ ++   + L I          +G+D TA  LH GH   +  +   Q+ GH+ 
Sbjct: 18  ILVEKDFLEKLKKNKPLKI---------KVGFDPTAPDLHLGHTVIINKMRQFQEFGHEV 68

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKG-IFSSFIKYGTGKTDALMLNNE 129
           I L+G  T +IGDPS  +E+R ++  ++++EN    K  IF    K  T      +  N 
Sbjct: 69  IFLIGDYTGMIGDPSGVNETRPVLTIEQVKENARTYKNQIFKILDKDKT-----RIEFNS 123

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
           +W+  +   +L+ +I S ++V RML  +  + R K E  +S  EF Y ++Q YD V L  
Sbjct: 124 SWMNKVTSAELI-DIASKYTVARMLERDDFKKRFKSENPISIHEFIYPLVQGYDSVAL-- 180

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLN 248
             +C ++MGG+DQ  N++ G  L +         +T PLL    G  KM K+ +  + LN
Sbjct: 181 --ECDVEMGGTDQKFNLLVGRHLQQLYGQEPQTIITLPLLEGLDGVKKMSKSANNYVALN 238

Query: 249 KEMTSPYN---------FWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAK 299
                 +           W+Y+  +   D+    K +  L  S  D      G    + K
Sbjct: 239 DSGDDMFGKIMSISDDLMWRYFELVSSKDL----KEIKNLKDSVND------GVNPRDIK 288

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMG---LLTLI 356
            ++A EI    H +  A+KA  + M+ F      + +    +S  ++    G   L  L+
Sbjct: 289 FLLAEEIVERFHNQSIAKKAKESFMQRFQKGGIPEDIDFTEVSIKDIQNDDGEINLPRLL 348

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
                  S ++  R +K+ +++I+   IS   L+I+     +   + LS GK+  I
Sbjct: 349 AHTNLVNSISDGHRAIKAGSVRIDGEKISQISLEIQ-----NKSELVLSQGKRRFI 399


>gi|149927757|ref|ZP_01916009.1| tyrosyl-tRNA synthetase [Limnobacter sp. MED105]
 gi|149823583|gb|EDM82813.1| tyrosyl-tRNA synthetase [Limnobacter sp. MED105]
          Length = 453

 Score =  122 bits (306), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 103/380 (27%), Positives = 178/380 (46%), Gaps = 21/380 (5%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  L  LQ  GH+ I L+G  TS+IGDPS R+ +R  +  +++
Sbjct: 91  LGLDPTAPDIHLGHTVVLNKLRQLQDLGHQVIFLIGDFTSMIGDPSGRNSTRPPLTKEQV 150

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           QEN    K      +K    +  A+  N++ WL  +    ++R + S ++V RML  +  
Sbjct: 151 QEN---AKTYHEQAVKILDPQRTAIEFNSK-WLMPLGADGMIR-LASSYTVARMLERDDF 205

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R +    ++  EF Y +LQ YD V L  +    L++GG+DQ  N++ G +L ++    
Sbjct: 206 TKRYQSGTPIAVHEFLYPLLQGYDSVALESD----LELGGTDQKFNLLMGRELQKQNGQS 261

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               LT PLL    G  KM K+ +  I + +   +P N +    +I D  + ++   L+ 
Sbjct: 262 AQCILTMPLLVGTDGVDKMSKSKNNYIGVTE---TPSNMFGKVMSISDELMWNWYTLLSF 318

Query: 279 LPMSEID--RMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM 336
             +++I+  + A   G+    AK  +A E+    H  + A  A       F      + M
Sbjct: 319 KSLADIEALKQACASGENPRNAKVALAQELVARFHTPQAAVDALNEFEARFKQGALPEDM 378

Query: 337 PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
           P I +   E     GL  ++  A    S+++A R+++   +KI++  IS++  ++     
Sbjct: 379 PEIKLDLPEGDADAGLAWVLKAASLCESSSDANRNIQQGGVKIDSEKISDKATRL----- 433

Query: 397 DSTGNIKLSFGKKNHIICHL 416
              G   +  GK+     HL
Sbjct: 434 -GKGTYVIQVGKRRFAKVHL 452


>gi|297171447|gb|ADI22448.1| tyrosyl-tRNA synthetase [uncultured gamma proteobacterium
           HF0500_05P21]
          Length = 404

 Score =  122 bits (306), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 107/376 (28%), Positives = 180/376 (47%), Gaps = 25/376 (6%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G+D TA  LH GH   +  +   Q+ GH+ I L+G  T +IGDPS  +E+R ++  ++I
Sbjct: 38  VGFDPTAPDLHLGHTVIINKMRQFQEFGHEIIFLIGDFTGMIGDPSGVNETRPVLTRKQI 97

Query: 100 QENIEKI-KGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
            EN     K IF    K  T      +  N +W+  I    L+ EI S ++V RML  + 
Sbjct: 98  DENAATYEKQIFKILDKDLTR-----IEFNSSWMQQIDSSKLI-EIASKYTVARMLERDD 151

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
            + R K    +S  E  Y ++QAYD V L    +  +++GG+DQ  N++ G  L +    
Sbjct: 152 FKQRFKTGNPISIHELLYPLVQAYDSVVL----EVDVELGGTDQKFNLLVGRHLQQLYGQ 207

Query: 219 PKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT 277
               A+T PLL    G  KM KT +  I L      P        +I D  +  + + L+
Sbjct: 208 SPQTAITLPLLEGLDGVKKMSKTANNFIALT---DPPKEMLGKIMSISDELMWRYFELLS 264

Query: 278 TLPMSEIDRMAKL--QGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQH 335
           T  + EI  + K    GK   + K ++A EI    + ++ +  A  + ++ F      + 
Sbjct: 265 TRSIDEICLLQKQVKDGKNPRDVKFLLAEEIVERFYDKQSSGDAKESFLKQFQKGQIPEK 324

Query: 336 MPTISISKDEVSRGMGLLTL---IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
           + ++SI+  EV    G++ +   +  A   TS +E  R +K+ ++++    I +++LQ+ 
Sbjct: 325 IKSVSINYSEVESEPGIVNMAKVLYLANLVTSVSEGHRAIKAGSVRLEGEKIESKQLQM- 383

Query: 393 LQDFDSTGNIKLSFGK 408
               D+     LSFGK
Sbjct: 384 ----DANSRHVLSFGK 395


>gi|317014184|gb|ADU81620.1| tyrosyl-tRNA synthetase [Helicobacter pylori Gambia94/24]
          Length = 402

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 102/377 (27%), Positives = 180/377 (47%), Gaps = 34/377 (9%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   +  L  LQ+ G +   L+G  T++IGDP+ ++E+R+ +  +++ 
Sbjct: 44  GFDPTAPDLHLGHTVLIQKLALLQQYGARVKFLIGDFTAMIGDPTGKNETRKPLNREQVL 103

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           EN +     +   I     +    +  N TWL ++    ++ E+ + FSV RML  +   
Sbjct: 104 ENAK----TYEEQIYKILDQKHTEVCFNSTWLDALGAKGMI-ELCTKFSVARMLERDDFA 158

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R K  + +S +EF Y +LQ YD V +  +    +++GG+DQ  N++ G  L       K
Sbjct: 159 KRYKENRPISIVEFLYPLLQGYDSVAMGAD----IELGGNDQKFNLLVGRFLQRAYGLNK 214

Query: 221 LFA-LTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
             + +T PLL    G  KM K+L   + + +E   P   +    ++ D  +  +   L+ 
Sbjct: 215 EQSIITMPLLEGLDGVQKMSKSLGNYVGITEE---PNAMFGKIMSVSDDLMWRYYTLLSA 271

Query: 279 LPMSEIDRMAK------LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIH 332
             + EI+ +        L  K + E    +A+EI    +  ++A KA     E F     
Sbjct: 272 KTLEEIEDLKHGILHQTLHPKAVKED---LASEIVARYYDNDQAFKAK----EQFSKVFS 324

Query: 333 SQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
           +  +P I +  D    G+G+L ++ + GF  ST++ARR ++   +KIN  ++ +E  +  
Sbjct: 325 ANLLPEILLESD-FDEGVGILDVLKQIGFCPSTSQARRDIQGGGVKINQEVVKDESYRF- 382

Query: 393 LQDFDSTGNIKLSFGKK 409
                  GN  +  GKK
Sbjct: 383 -----VKGNYVIQLGKK 394


>gi|302871481|ref|YP_003840117.1| tyrosyl-tRNA synthetase [Caldicellulosiruptor obsidiansis OB47]
 gi|302574340|gb|ADL42131.1| tyrosyl-tRNA synthetase [Caldicellulosiruptor obsidiansis OB47]
          Length = 396

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 109/375 (29%), Positives = 189/375 (50%), Gaps = 25/375 (6%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D     +H GH   L  L  LQ  GH  I ++G  T++IGDP+ + E+R+ +  +E+
Sbjct: 37  LGLDPNVPDVHLGHAVVLRKLKQLQDLGHNIILIIGDFTAMIGDPTGKSETRKQLTKEEV 96

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           Q+N E  K      +K    +   +  N+E WL  + ++D++  + S ++V RML  E+ 
Sbjct: 97  QKNAEPFK---QQVLKILDPQKTTIRYNSE-WLEPMNFLDVIN-LASKYTVARMLERETF 151

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL--K 217
           R R+++   LS  EF Y ++Q YD V +    +  +++G ++Q  NI+ G  L +    K
Sbjct: 152 RQRMEKNLPLSIHEFFYPLMQGYDSVVI----EADVELGATEQKFNILMGRTLQKEYGCK 207

Query: 218 TPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRL 276
           T ++ AL  P+L    G  KM K+L   I +N+    P   +    +I D  ++S+ +  
Sbjct: 208 TIQV-ALLMPILVGTDGVNKMSKSLGNYIGINE---PPNVMYGKVMSIPDEVMISYYELT 263

Query: 277 TTL-PMSEIDRMAKLQGKEIN--EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS 333
           T + P    +   KL+   ++  +AK  +A EI  + HG E A+KA    ++ F      
Sbjct: 264 TDVEPEEIEEIRRKLEEGTLHPRDAKMRLAREIVKLYHGEEAAKKAEEEFIKVFQKKDIP 323

Query: 334 QHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL 393
            ++P + +   +V     L   +V+    +ST+E  R +KS A+K+N   I++  L I+ 
Sbjct: 324 DNIPEVELQSSKVY----LPRFMVENKLCSSTSEGMRLIKSGAVKLNGEKIND--LDIEF 377

Query: 394 QDFDSTGNIKLSFGK 408
           Q+ D     KL F K
Sbjct: 378 QNGDVLQVGKLKFVK 392


>gi|291486442|dbj|BAI87517.1| tyrosyl-tRNA synthetase [Bacillus subtilis subsp. natto BEST195]
          Length = 413

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 100/378 (26%), Positives = 178/378 (47%), Gaps = 26/378 (6%)

Query: 19  HQISNPRELDILCSQGVVTA-----YIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           H++  P EL     + + T       +G D +A  +H GH   L  L   Q+ GH    L
Sbjct: 28  HEVIPPEELKAKLVKSISTGTPLKIKLGLDPSAPDVHLGHTVVLNKLRQFQENGHIVQLL 87

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
           +G  T  IGDP+ +  +R+ +  +E+Q N    K  F  F K    +   L  N++ WL 
Sbjct: 88  IGDFTGKIGDPTGKSAARKQLTDEEVQHN---AKTYFEQFGKVLDPEKVELHYNSK-WLK 143

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDC 193
           ++   D++ E+    +V R++  +    R+  ++ +S  EF Y ++Q YD V L    + 
Sbjct: 144 TLNLEDVI-ELAGKITVARLMERDDFEERIAMQKPISLHEFFYPLMQGYDSVVL----ES 198

Query: 194 RLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMT 252
            +++GG+DQ  N++ G    ER    K   +  PLL    G  KM K+    I +N+   
Sbjct: 199 DIELGGTDQHFNVLMGRHFQERYNKEKQVVILMPLLEGLDGVEKMSKSKHNYIGINE--- 255

Query: 253 SPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK-LQGKEIN--EAKKIIATEITTM 309
            P + +    ++ D+ +  +    T L + E  ++ K L+   ++  +AK ++A  I  M
Sbjct: 256 HPNDMYGKTMSLPDSLMKKYIHLATDLELEEKKQLVKDLETGAVHPRDAKMLLAKTIVRM 315

Query: 310 VHGREEAEKAATAAMECFDMSIHSQHMPT-ISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
            HG    EKAA AA   F        +P  I     +  + + ++ L+VK    +S +EA
Sbjct: 316 YHG----EKAAEAAEHSFKTVFQENSLPEDIPAVNWKGEKTIAMIDLLVKLKILSSKSEA 371

Query: 369 RRHLKSNAIKINNSIISN 386
           RR +++  ++I+   I++
Sbjct: 372 RRMIQNGGVRIDGEKITD 389


>gi|219667597|ref|YP_002458032.1| tyrosyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2]
 gi|219537857|gb|ACL19596.1| tyrosyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2]
          Length = 410

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 93/350 (26%), Positives = 165/350 (47%), Gaps = 17/350 (4%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D +A  +H GH   L  +  LQ  GH+ + ++G  T  IGDPS + + R  +  +++
Sbjct: 42  LGLDPSAPDIHLGHAVVLRKIKQLQDLGHEAVIVIGDFTGKIGDPSGKAKGRTALSDEQV 101

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           +EN    +  F    K    +   +  N+E WL  + + D+L+ + +  +V RML  +  
Sbjct: 102 KEN---ARTYFEQIFKVLDKEKTTVRYNSE-WLSKLNFEDVLK-LAATTTVARMLERDDF 156

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
           + R      +   EF Y ++QAYD V L  +    +++GG+DQ  NI+ G  L + +  P
Sbjct: 157 QKRFSGNVPIGIHEFFYPLMQAYDSVALQTD----IELGGTDQTFNILMGRTLQKAMGQP 212

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
           +  A+  PLL    G  KM K+L   I + +   +P  F +    + D  ++ + +  T 
Sbjct: 213 QQIAMFMPLLEGLDGVEKMSKSLGNYIGVYE--PAPVMFKKVM-EVPDPLILKYFELATD 269

Query: 279 LPMSEID--RMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM 336
                I+  R+   QGK   + K  +A  IT + H  ++   A       F        +
Sbjct: 270 EHPDRIEAFRVELAQGKNPRDVKYALAEIITRLYHTEQDVMTAKAYYEAAFSKKAIPAQL 329

Query: 337 PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISN 386
           P + +     SR + L+ L+V++GF  S  E RR ++   +++N   IS+
Sbjct: 330 PVLPVKAR--SRLIELVPLLVQSGFTASNGEFRRLVQQGGVQLNQQKISD 377


>gi|188996488|ref|YP_001930739.1| tyrosyl-tRNA synthetase [Sulfurihydrogenibium sp. YO3AOP1]
 gi|188931555|gb|ACD66185.1| tyrosyl-tRNA synthetase [Sulfurihydrogenibium sp. YO3AOP1]
          Length = 400

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 102/362 (28%), Positives = 168/362 (46%), Gaps = 42/362 (11%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   L  L   Q+ GH    ++G  T++IGDPS RD++R  +  +++ 
Sbjct: 39  GFDPTAPDLHLGHTVLLQKLRTFQQLGHTVFFIIGDFTAMIGDPSGRDQTRPPLTKEQVL 98

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           EN +  K       K    +   ++ N+E WL  +   DL++ + + ++V RML  E  +
Sbjct: 99  ENAKTYK---EQVFKVLDPEKTVVVFNSE-WLGKMTAEDLIK-LSAKYTVARMLEREDFK 153

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER--LKT 218
            R K    +S  EF Y +LQAYD V +  +    +++GGSDQ  N++ G D+ +   ++ 
Sbjct: 154 KRFKENIPISIHEFIYPLLQAYDSVAIKAD----VELGGSDQRFNLLIGRDIQKEYGIEN 209

Query: 219 PKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYN---------FWQYWRNIDDAD 268
           P++ A+  PLL    G  KM K+    I + +     +           WQYW       
Sbjct: 210 PQV-AILLPLLVGTDGVKKMSKSYGNYIGITEPPEEMFGKIMSISDELMWQYW------- 261

Query: 269 VVSFAKRLTTLPMSEIDRMAKLQGKEI---NEAKKIIATEITTMVHGREEAEKAATAAME 325
                + LT L + EI+++ +   K I    E KK +   I    H +E+    A  A E
Sbjct: 262 -----ELLTDLTVEEINKLKEDVQKGILHPMEVKKQLGMYIVERFHSKED----AIRARE 312

Query: 326 CFDMSIHSQHMPT-ISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSII 384
            F+     + +P  I + K        L  +I     A +  EA+R +K   +K+N   I
Sbjct: 313 HFEKVHSKKEIPEDIPVFKASEITETELFEIIFNLKLAETKAEAKRLIKQGGVKVNGEKI 372

Query: 385 SN 386
           ++
Sbjct: 373 TD 374


>gi|94268046|ref|ZP_01291067.1| Tyrosyl-tRNA synthetase, class Ib [delta proteobacterium MLMS-1]
 gi|93451751|gb|EAT02515.1| Tyrosyl-tRNA synthetase, class Ib [delta proteobacterium MLMS-1]
          Length = 411

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 99/373 (26%), Positives = 172/373 (46%), Gaps = 23/373 (6%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   +  +   Q+ GH+   L+G  T +IGDP+ + E+R+ +  +E+ 
Sbjct: 50  GFDPTAPDLHLGHTVLVQKMKHFQELGHEIYFLIGDFTGMIGDPTGKSETRKPLTPEEVA 109

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
            N E  K     F      +T  +   N  WL  +   D++R + S  +V RML  E  +
Sbjct: 110 ANAETYKE--QVFKILDPARTRVVF--NSVWLDKLSPRDMIR-LASQLTVARMLEREDFK 164

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R   E+++   EF Y ++Q YD V LA +    +++GG+DQ  N++ G DL        
Sbjct: 165 QRFVNEKAIGIHEFMYPLIQGYDSVALAAD----VELGGTDQLFNLLTGRDLQRVWGQEP 220

Query: 221 LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTL 279
              LT PLL    G  KM K+L   I + +   S  + +    ++ D  +  + + L+ L
Sbjct: 221 QVVLTMPLLEGLDGVNKMSKSLDNYIGITE---SADDIYGKTLSMPDDLMFRYYELLSDL 277

Query: 280 PMSEI-DRMAKLQGKEINE--AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM 336
              EI D    + G +++    K+ +A E+    +    A +A       F      + +
Sbjct: 278 SRVEIADLQQGVSGGKLHPKAVKQRLARELVARFYDEPAARRAEDNFERVFKQHQAPEDV 337

Query: 337 PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
           P ++++         L  L+V AG    T EARR +K  A+ I+   ++++   +     
Sbjct: 338 PELTLAAG--GEPCWLPRLLVDAGLVKGTGEARRLIKQRAVSIDGEKVADDSATVA---- 391

Query: 397 DSTGNIKLSFGKK 409
            ++G + L  GK+
Sbjct: 392 -TSGEVLLKVGKR 403


>gi|164687946|ref|ZP_02211974.1| hypothetical protein CLOBAR_01591 [Clostridium bartlettii DSM
           16795]
 gi|164602359|gb|EDQ95824.1| hypothetical protein CLOBAR_01591 [Clostridium bartlettii DSM
           16795]
          Length = 401

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 108/375 (28%), Positives = 180/375 (48%), Gaps = 28/375 (7%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D +A  +H GH   L  L  LQ  GH+ I ++G  T  IGDP+ +   R+ +  +E+
Sbjct: 42  LGLDPSAPDIHLGHTVVLRKLKQLQDLGHEIIIIIGDFTGKIGDPTGKSRMRKFLSDEEV 101

Query: 100 QENIEKI-KGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
            +N +   + +F    K  T     +  N+E WL  + + D+L+   S  +V RML  E 
Sbjct: 102 LQNAKTYEEQVFKILDKEKT----TIKFNSE-WLSKLTFGDVLKLTAS-TTVARMLERED 155

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
            + R + ++ +   EF Y ++QA+D    +   +  ++ GG+DQ  N++ G +L + +  
Sbjct: 156 FKLRFENQRPIYLNEFFYPLMQAFD----STAIEADIEFGGTDQRFNLLSGRNLQKEIGE 211

Query: 219 PKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT 277
                +  PL+    G  KM KTL   I + +   S Y   Q    I D  +V +   LT
Sbjct: 212 EPQVVIMMPLIEGLDGKNKMSKTLGNYIGIYESAKSKY---QKVMEIPDELIVKYYTLLT 268

Query: 278 TLPMSEIDRM-AKLQGKEIN--EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQ 334
            +    I  + AKL+ + +N  + K  +A EI ++ H  EE E+A       F M    +
Sbjct: 269 DVDDEIIKEVEAKLKDESVNPRDIKMDLAREIVSLYHTEEEVEQAEERFKMIFQMGQKPK 328

Query: 335 HMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
            + T+++SK++      L++ +V  G  +S +E RR L    IKIN+  I+ EK      
Sbjct: 329 DIDTVNVSKED----FDLISTVVDKGLVSSKSEFRRLLPQGGIKINDKKITMEK------ 378

Query: 395 DFDSTGNIKLSFGKK 409
           D    G I +  GKK
Sbjct: 379 DLPKEGEIVVQVGKK 393


>gi|9971901|gb|AAG10463.1|AF279106_25 predicted tyrosyl-tRNA synthetase [uncultured marine gamma
           proteobacterium EBAC31A08]
          Length = 395

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 104/355 (29%), Positives = 170/355 (47%), Gaps = 19/355 (5%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   L  L   Q  GHK I L+G  T  IGDPS ++++R  + S+E+ 
Sbjct: 36  GFDPTAPDLHLGHTVLLNKLRHFQDLGHKVIFLIGDFTGQIGDPSGKNKTRPTLTSEELI 95

Query: 101 ENIEKI-KGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
            N +   K +F    K  T     +  N+E W C+    D L  + S ++V RML  +  
Sbjct: 96  SNAKTYEKQVFKILKKELT----EVKFNSE-W-CNKLGADGLIGLASKYNVARMLERDDF 149

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R    QS++  EF Y ++Q YD V L  + +C    GG+DQ  N++ G +L       
Sbjct: 150 NKRYSANQSIAIHEFLYPLVQGYDSVALEADVEC----GGTDQKFNLLVGRELQRSYGQE 205

Query: 220 KLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               LT P+L    G  KM K+L+  I +++E   P + +    +I D  +  + + L+ 
Sbjct: 206 PQVVLTVPILEGLDGINKMSKSLNNFIAIDEE---PNDMFGKIMSISDELMWRWFELLSF 262

Query: 279 LPMSEIDRMAKL--QGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM 336
               EI  + K   +G    + K ++A E+    H   +  K   A ++ F        +
Sbjct: 263 TSEKEIGVLKKKMEEGTNPRDIKFLLAEELVDRFHSEGDGSKCKEAFLQRFQKGQMPDDI 322

Query: 337 PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
           P++S+  D  + G+ L+ L+      +ST+EA R +K   +KI++  I + K+ I
Sbjct: 323 PSMSV--DVGAEGIPLVNLLKNCEMTSSTSEAMRLVKQGGVKIDSVKIEDPKMLI 375


>gi|307637465|gb|ADN79915.1| Tyrosyl-tRNA synthetase [Helicobacter pylori 908]
 gi|325996055|gb|ADZ51460.1| Tyrosyl-tRNA synthetase [Helicobacter pylori 2018]
 gi|325997650|gb|ADZ49858.1| Tyrosyl-tRNA synthetase [Helicobacter pylori 2017]
          Length = 402

 Score =  122 bits (305), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 102/377 (27%), Positives = 180/377 (47%), Gaps = 34/377 (9%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   +  L  LQ+ G +   L+G  T++IGDP+ ++E+R+ +  +++ 
Sbjct: 44  GFDPTAPDLHLGHTVLIQKLALLQQYGARVKFLIGDFTAMIGDPTGKNETRKPLNREQVL 103

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           EN +     +   I     +    +  N TWL ++    ++ E+ + FSV RML  +   
Sbjct: 104 ENAK----TYEEQIYKILDQRHTEVCFNSTWLDTLGAKGMI-ELCAKFSVARMLERDDFA 158

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R K  + +S +EF Y +LQ YD V +  +    +++GG+DQ  N++ G  L       K
Sbjct: 159 KRYKENRPISIVEFLYPLLQGYDSVAMGAD----IELGGNDQKFNLLVGRFLQRAYGLNK 214

Query: 221 LFA-LTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
             + +T PLL    G  KM K+L   + + +E   P   +    ++ D  +  +   L+ 
Sbjct: 215 EQSIITMPLLEGLDGVQKMSKSLGNYVGITEE---PNAMFGKIMSVSDDLMWRYYTLLSA 271

Query: 279 LPMSEIDRMAK------LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIH 332
             + EI+ +        L  K + E    +A+EI    +  ++A KA     E F     
Sbjct: 272 KTLEEIEDLKHGILHQTLHPKAVKED---LASEIVARYYDNDQAFKAK----EQFSKVFS 324

Query: 333 SQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
           +  +P I +  D    G+G+L ++ + GF  ST++ARR ++   +KIN  ++ +E  +  
Sbjct: 325 ANLLPEILLESD-FDEGVGVLDVLKQIGFCPSTSQARRDIQGGGVKINQEVVKDESYRF- 382

Query: 393 LQDFDSTGNIKLSFGKK 409
                  GN  +  GKK
Sbjct: 383 -----VKGNYVIQLGKK 394


>gi|291568848|dbj|BAI91120.1| tyrosyl-tRNA synthetase [Arthrospira platensis NIES-39]
          Length = 415

 Score =  122 bits (305), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 106/398 (26%), Positives = 186/398 (46%), Gaps = 31/398 (7%)

Query: 23  NPRE---LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTS 79
           NP E     +  S G +   +G D T S +H GH      L   Q  GH  + ++G  T+
Sbjct: 38  NPEENLGRRLALSSGPLRIKLGIDPTGSDIHLGHSIIFRKLRAFQDAGHTAVLIIGDFTA 97

Query: 80  IIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSI---K 136
            IGDP+ + E RR +  +++++N +         + + T     +  N+E WL  +   K
Sbjct: 98  RIGDPTGKSEVRRQLTPEQVEKNAQTYLDQLRPILDFDTPGRLEIRRNSE-WLSKLDLAK 156

Query: 137 YIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQ 196
            +DLL    S  +V +ML+ E    R ++E  +   EF Y ++Q YD V +  +    ++
Sbjct: 157 TLDLL----SRMTVGQMLAKEGFSLRFEQENPIYLHEFLYPLMQGYDSVAVQAD----VE 208

Query: 197 MGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPY 255
           +GG+DQ  N+  G DL         F L  P+L    G  KM K+L   + L+++  + Y
Sbjct: 209 LGGTDQKFNLAVGRDLQRYFGQTPQFGLLMPILIGTDGVQKMSKSLGNYVGLSEDALTMY 268

Query: 256 NFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREE 315
           +  +    + D+ +  + + LT  P++E+    +       + +K++A +I T  HG   
Sbjct: 269 SKLE---KVPDSLIEQYFELLTDYPLAELPENPR-------DRQKLLALDIVTQYHGEAA 318

Query: 316 AEKAATAAMECFDM-SIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKS 374
           A  A  AA+      +  ++ +P  S+S  EV     L  ++  +G   S +EARR +  
Sbjct: 319 ALAAQNAALNLVQGDATRAEAVPEFSLS--EVEFPAKLFYILSASGLCKSGSEARRQIAG 376

Query: 375 NAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
            A+KI+   I ++ L +   + +  G + L  GKK  I
Sbjct: 377 GAVKIDGDRIEDDNLVVASAE-EVKGRV-LQVGKKKFI 412


>gi|296331495|ref|ZP_06873967.1| tyrosyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305676482|ref|YP_003868154.1| tyrosyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str.
           W23]
 gi|296151610|gb|EFG92487.1| tyrosyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305414726|gb|ADM39845.1| tyrosyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str.
           W23]
          Length = 412

 Score =  122 bits (305), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 96/377 (25%), Positives = 180/377 (47%), Gaps = 24/377 (6%)

Query: 19  HQISNPRELDILCSQGVVTA-----YIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           H++  P EL     + + T       +G D +A  +H GH   L  L   Q+ GH    L
Sbjct: 27  HEVIPPEELRAKLVKSISTGTPLKIKLGLDPSAPDVHLGHTVVLNKLRQFQENGHIVQLL 86

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
           +G  T  IGDP+ +  +R+ +  +E+Q N    K  F  F K    +   L  N++ WL 
Sbjct: 87  IGDFTGKIGDPTGKSAARKQLTDEEVQHN---AKTYFQQFGKVLDQEKVELHYNSK-WLK 142

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDC 193
           ++   D++ ++    +V R++  +    R+  ++ +S  EF Y ++Q YD V L    + 
Sbjct: 143 TLNLEDVI-DLAGKITVARLMERDDFEERIAMQKPISLHEFFYPLMQGYDSVVL----ES 197

Query: 194 RLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMT 252
            +++GG+DQ  N++ G    ER    K   +  PLL    G  KM K+    I +++   
Sbjct: 198 DIELGGTDQHFNVLMGRHFQERYNKEKQVVILMPLLEGLDGVEKMSKSKHNYIGIDE--- 254

Query: 253 SPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK-LQGKEIN--EAKKIIATEITTM 309
            P + +    ++ D+ +  +    T L + E  ++ K L+   ++  +AK ++A  I  M
Sbjct: 255 HPNDMYGKTMSLPDSLMKKYIHLATDLELEEKKQLVKDLETGAVHPRDAKMLLAKTIVRM 314

Query: 310 VHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEAR 369
            HG E AE A  +    F  +   + +P ++   +   + M ++ ++VK    +S +EAR
Sbjct: 315 YHGAEAAETAEHSFKTVFQENSLPEDIPAVNWKGE---KKMAIIDMLVKLELLSSKSEAR 371

Query: 370 RHLKSNAIKINNSIISN 386
           R +++  ++IN   I++
Sbjct: 372 RMIQNGGVRINGEKITD 388


>gi|73540182|ref|YP_294702.1| tyrosyl-tRNA synthetase [Ralstonia eutropha JMP134]
 gi|115305821|sp|Q475S5|SYY_RALEJ RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|72117595|gb|AAZ59858.1| tyrosyl-tRNA synthetase [Ralstonia eutropha JMP134]
          Length = 413

 Score =  122 bits (305), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 100/376 (26%), Positives = 179/376 (47%), Gaps = 32/376 (8%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  L  LQ  GH+ I L+G  TS IGDPS R+ +R  +  ++I
Sbjct: 56  LGLDPTAPDIHIGHTVVLNKLRQLQDLGHQVIFLIGDFTSTIGDPSGRNSTRPPLTREQI 115

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           + N +      S  +     +T+  +  N  W C       + ++ + ++V RM+  +  
Sbjct: 116 EANAQTYYRQASLVLD--PARTE--IRYNSEW-CDPLGARGMIQLAAKYTVARMMERDDF 170

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R +    +S  EF Y ++Q YD V L  +    L++GG+DQ  N++ G +L +     
Sbjct: 171 TKRFRSGIPISVHEFLYPLMQGYDSVALKSD----LELGGTDQKFNLLVGRELQKEYGQE 226

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               LT PLL    G  KM K+    + + +   +P   +    +I D  +  +   L+ 
Sbjct: 227 PQCILTMPLLVGLDGVEKMSKSKGNYVGVTE---APNEMFGKLMSISDDLMWQYFTLLSF 283

Query: 279 LPMSEIDRMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIH---S 333
            P++EID M +    G+   + K ++A EI    H + +AEK    A+E F+        
Sbjct: 284 RPLAEIDLMKQEIAAGRNPRDCKVLLAQEIVARFHSQADAEK----ALEDFNHRARGGVP 339

Query: 334 QHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL 393
             +P +S+S       +G+  L+ +A    ST+EA R+++   +KI+ + +S++ +++  
Sbjct: 340 DDIPAVSLS----GAPLGIAQLLKQANLVPSTSEANRNIEQGGVKIDGATVSDKAVKV-- 393

Query: 394 QDFDSTGNIKLSFGKK 409
               + G   +  GK+
Sbjct: 394 ----AAGTYVVQVGKR 405


>gi|300087847|ref|YP_003758369.1| tyrosyl-tRNA synthetase [Dehalogenimonas lykanthroporepellens
           BL-DC-9]
 gi|299527580|gb|ADJ26048.1| tyrosyl-tRNA synthetase [Dehalogenimonas lykanthroporepellens
           BL-DC-9]
          Length = 408

 Score =  122 bits (305), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 100/390 (25%), Positives = 193/390 (49%), Gaps = 30/390 (7%)

Query: 15  RGFIHQISNPRELDILCSQGV-VTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           R  + +I + +EL  L S G  +    G+D ++  +H GH+  L  L   Q+ GH+ + +
Sbjct: 11  RRAVSEIISEKELRSLLSSGKKLRLKEGFDPSSPDIHLGHMVGLRKLRQFQEMGHQVVLI 70

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
           +G  T+ IGDP+    +R ++ +++++ N E        F K        +   +E W  
Sbjct: 71  VGDWTAQIGDPTGASVTRPILTAEQVRANAET---YLQQFFKVVDRARTEVRWQSE-WFT 126

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDC 193
                D+++ + S F++ +ML+ +  + R    + ++  EF Y +LQAYD V +    + 
Sbjct: 127 GFTLADVIK-LTSRFTIAQMLARDDFKKRFDSNRPITITEFLYPLLQAYDSVMV----EA 181

Query: 194 RLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLT-TASGTKMGKTLSGAIWLNKEMT 252
            ++ GG+DQ  N++ G +L   +  P      +P+LT T  G KM K+L   I + +   
Sbjct: 182 DIEFGGNDQKFNLLVGRELQSMIGQPPQQVFMTPILTGTGGGRKMSKSLHNHIGVAE--- 238

Query: 253 SPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK-LQGKEIN--EAKKIIATEITTM 309
            P   +    +I D  ++ + + LT +  +E+D +A+ L+  ++N  E KK +A EI   
Sbjct: 239 PPEVIFGKVMSIGDDLIMQYFELLTDITDNELDTIAEDLKAGQVNPMEYKKRLAREILLQ 298

Query: 310 VHGREEAEKAATAAMECFDMSIHSQH-----MPTISISKDEVSRGMG---LLTLIVKAGF 361
           ++ +  A+K    AM  F+ S+H +H     +P I I     +R  G   L +++ ++G 
Sbjct: 299 LYPKSSADK----AMAYFE-SVHQRHEVPDTIPEIRIDYSAFTRDGGDIDLTSILCQSGL 353

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQI 391
             S  EA+R +    + I+ + ++ + L +
Sbjct: 354 TASRGEAKRLIAQGGVSIDGNKVTTDTLSL 383


>gi|317121680|ref|YP_004101683.1| tyrosyl-tRNA synthetase [Thermaerobacter marianensis DSM 12885]
 gi|315591660|gb|ADU50956.1| tyrosyl-tRNA synthetase [Thermaerobacter marianensis DSM 12885]
          Length = 421

 Score =  122 bits (305), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 93/360 (25%), Positives = 172/360 (47%), Gaps = 20/360 (5%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  LH GH   L  L   Q  GH+ + ++G  T  IGDP+ +  +R  +  +++
Sbjct: 58  LGLDPTAPDLHVGHTVVLRKLRQFQDLGHQVVLIIGDFTGRIGDPTGKSVTRPQLTEEQV 117

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           +EN           +     +T+  +  N+ WL  + + D++R + + ++V RML  +  
Sbjct: 118 RENARTYAEQLGRILDM--ERTE--LTFNDRWLGPLTFADVVR-LAARYTVARMLERDDF 172

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R +  + ++  EF Y + QAYD V +  +    +++GG+DQ  N++ G ++       
Sbjct: 173 ARRYREGRPIAIHEFLYPLAQAYDSVAVRAD----VELGGTDQKFNLLVGREIQREYGQE 228

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
              AL  PLL    G  KM K+L   I + +    P   +    +I D  +V +    T 
Sbjct: 229 PQVALLMPLLEGTDGKEKMSKSLGNYIGIAE---PPGQMFGKTMSIPDELIVKYMILATD 285

Query: 279 LPMSEIDRMAK-LQGKEIN--EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQH 335
           L M+EI R+ + +    +N  +AK  +A  +  M HG+  A+ A    +  F        
Sbjct: 286 LDMAEIRRLEQGMAAGTVNPRDAKLRLAHALVRMYHGKAAADAAQEEFLRVFSRHQLPAE 345

Query: 336 MPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           MP +++    V R +  + L+  AG A S +EARR ++  A++++   +++ + ++   D
Sbjct: 346 MPEVTLP---VPR-LDAVQLLRVAGMAPSNSEARRLIEQGAVRLDGRRVASPQEELAPAD 401


>gi|269798124|ref|YP_003312024.1| tyrosyl-tRNA synthetase [Veillonella parvula DSM 2008]
 gi|269094753|gb|ACZ24744.1| tyrosyl-tRNA synthetase [Veillonella parvula DSM 2008]
          Length = 402

 Score =  122 bits (305), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 99/358 (27%), Positives = 170/358 (47%), Gaps = 20/358 (5%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  L   Q+ GH+ + ++GG T+ IGDP+ +  +R  +  +E+
Sbjct: 42  LGLDPTAPDIHLGHTVPLRKLRLFQEFGHQVVIVIGGFTARIGDPTGKSVTRPPLTKEEV 101

Query: 100 QENIEKIK-GIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
            +N E  K  IF       T     ++ +N  WL S+ + D+LR + S ++V RM+  + 
Sbjct: 102 LKNAETYKTQIFKVLDPEKT-----IVRDNSEWLESMNFADVLR-LASSYTVARMMERDD 155

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
              R K  + +   EF Y ++Q +D V L  +    ++ GG+DQ  N++ G  L E    
Sbjct: 156 FSKRFKEGRPIGVHEFMYPLMQGHDSVALHAD----VEFGGTDQTFNLLMGRHLQELEGQ 211

Query: 219 PKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT 277
                +T PLL    G  KM K+L   I +++E   P   +    +I D  ++ +   +T
Sbjct: 212 EPQVVITMPLLEGLDGIQKMSKSLGNYIGIDEE---PKEMYGKAMSIPDELMMRYFMLVT 268

Query: 278 TLPMSEIDRMAK-LQGKEIN--EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQ 334
            + + + + M K L+  E++  +AK  +A  I  + HG E A +A       F       
Sbjct: 269 DMSIEDQEDMTKRLESGELHPRDAKMQLARTIVRLYHGEEAALEAEEEFKRVFQQRAMPT 328

Query: 335 HMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
            +P  ++  D  +  + +      AG   S  EARR +K+ A K+N    S E + ++
Sbjct: 329 DIPEYAM--DAPTEPIFVPQFCTDAGLTASNGEARRSIKAGAFKVNGEKYSEENITLE 384


>gi|224372557|ref|YP_002606929.1| tyrosyl-tRNA synthetase [Nautilia profundicola AmH]
 gi|223589484|gb|ACM93220.1| tyrosyl-tRNA synthetase [Nautilia profundicola AmH]
          Length = 417

 Score =  122 bits (305), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 105/361 (29%), Positives = 172/361 (47%), Gaps = 24/361 (6%)

Query: 37  TAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRS 96
           T   G+D TA  LH GH   L  L   QK G     L+G  T+ IGDPS +  +R+M+  
Sbjct: 56  TIKAGFDPTAPDLHLGHTVLLQKLKTFQKYGATVQFLIGDFTAQIGDPSGKSATRKMLTP 115

Query: 97  QEIQENIEKIK-GIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLS 155
            E+ +N E  K  +F    +  T      ++ N  WL ++    ++ E+ + ++V RML 
Sbjct: 116 DEVAKNAETYKEQVFKILDRENTE-----VVFNSKWLNALGAAGIV-ELTTTYTVARMLE 169

Query: 156 FESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER 215
            +    R K +  ++  EF Y +LQ YD V L  +    +++GG+DQ  N++ G  L + 
Sbjct: 170 RDDFEKRFKSQTPIAISEFIYPLLQGYDSVALKSD----IEIGGTDQKFNLLMGRQLQKT 225

Query: 216 LKTPK-LFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFA 273
               K    +  PLL    G  KM K+L   I + ++   P   +    +I D  +  + 
Sbjct: 226 YNVGKEQSVIMMPLLVGLDGINKMSKSLGNYIGITED---PNTIFAKVLSISDELMWDWY 282

Query: 274 KRLTTLPMSEIDRMAKLQGKEINE--AKKIIATEITTMVHGREEAEKAATAAMECFDMSI 331
           + L+   + EI+ + +   + +N   AK+ +A EI    HG    E A   A E FD  +
Sbjct: 283 ELLSEKSLKEIEELKQKVKEGMNPKIAKEALAIEIVDRFHG----EGAGIKAKEHFD-KV 337

Query: 332 HSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
           H Q      I + E+     ++  +V    A+S +EARRH+K  A++IN   I ++ L +
Sbjct: 338 HKQGQIPDDIPEFELDE-QNIVDALVNTKLASSKSEARRHIKGGAVRINQEKIDDQNLIL 396

Query: 392 K 392
           K
Sbjct: 397 K 397


>gi|71033279|ref|XP_766281.1| tyrosyl-tRNA synthetase [Theileria parva strain Muguga]
 gi|68353238|gb|EAN33998.1| tyrosyl-tRNA synthetase, putative [Theileria parva]
          Length = 512

 Score =  122 bits (305), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 99/382 (25%), Positives = 171/382 (44%), Gaps = 73/382 (19%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVV---------TAYIGYDLTASSLHAGHLTQ 56
           S  LS   ER  I Q ++  +LD L +             + Y G D T   +H G L Q
Sbjct: 84  SRILSQCMERSMISQSTDFVKLDQLLTSYQTQNFNNSMYNSIYYGIDCTNDFIHEGTLFQ 143

Query: 57  LMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRR-------------------MMRSQ 97
           L+LL          + ++GGGT+++GDPS++    R                       Q
Sbjct: 144 LLLLRRFLSENFNVVLVLGGGTTLVGDPSYKLRRNRNDNFHFSNFILNKDNSEIDTTNEQ 203

Query: 98  EIQENIEKI---------KGIFSS------------------FIKYGTGKTDALMLNNET 130
            I+E   KI          G+++                    +   +      ++NN  
Sbjct: 204 AIEEIATKILSRPIKIENTGLYNDVIVVPKVVRVSNLESDLDILSEMSKPYRVFIVNNRD 263

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL--------KREQSLSFLEFNYMILQAY 182
               +  ++ L  +    +V RML+ + ++ R+        K+  ++   E  YM LQA 
Sbjct: 264 IYNRVNLMEYLETVARNMNVGRMLARDCIKIRMLDKDGTGYKKSINMDLAELMYMSLQAM 323

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDL-------GERLKTPKLFALTSPLLTTASGT 235
           DFV LA+N++C++Q+GG+DQ GNI+ GI+L       G  L    ++ +T+PLL    G 
Sbjct: 324 DFVYLAQNFNCKIQLGGNDQMGNIVSGIELAGEHDTNGSSLGIGNVYGITTPLLKDKFGE 383

Query: 236 KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI 295
           K+ KT S         TSP+ FW ++R++DD++V ++ K  T + +   D++ +   +  
Sbjct: 384 KISKTGSNCFLKITNKTSPHEFWSHFRSVDDSEVENYLKWFTDVSL---DKIKESILEHY 440

Query: 296 NEAKKIIATEITTMVHGREEAE 317
           N  K ++A E+T +++G +  E
Sbjct: 441 NSGKVLLADELTRLLYGNQTVE 462


>gi|208434686|ref|YP_002266352.1| tyrosyl-tRNA synthetase [Helicobacter pylori G27]
 gi|208432615|gb|ACI27486.1| tyrosyl-tRNA synthetase [Helicobacter pylori G27]
          Length = 402

 Score =  122 bits (305), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 103/377 (27%), Positives = 181/377 (48%), Gaps = 34/377 (9%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   +  L  LQ+ G +   L+G  T++IGDP+ ++E+R+ +  +++ 
Sbjct: 44  GFDPTAPDLHLGHTVLIQKLALLQQYGARVKFLIGDFTAMIGDPTGKNETRKPLNREQVL 103

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           EN +     +   I     +    +  N TWL ++    ++ E+ + FSV RML  +   
Sbjct: 104 ENAK----TYEEQIYKILDQKHTEVCFNSTWLDALGAKGMI-ELCAKFSVARMLERDDFA 158

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R K  + +S +EF Y +LQ YD V +  +    +++GG+DQ  N++ G  L       K
Sbjct: 159 KRHKENRPISIVEFLYPLLQGYDSVAMGAD----IELGGNDQKFNLLVGRFLQRAYGLNK 214

Query: 221 LFA-LTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
             + +T PLL    G  KM K+L   + + +E   P   +    ++ D  +  +   L+ 
Sbjct: 215 EQSIITMPLLEGLDGVQKMSKSLGNYVGITEE---PNAMFGKIMSVSDDLMWRYYTLLSA 271

Query: 279 LPMSEIDRMAK------LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIH 332
             + EI+ +        L  K + E    +A EI    +  ++A KA     E F     
Sbjct: 272 KTLEEIEDLKHGILNQTLHPKAVKED---LAGEIVARYYDNDQAFKAK----EQFSKVFS 324

Query: 333 SQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
           +  +P I +S+ +   G+G+L ++ + GF  ST++ARR ++   +KIN  +I +E  +  
Sbjct: 325 ANLLPEI-LSESDFDEGVGILDVLKQIGFCPSTSQARRDIQGGGVKINQEVIKDESYRF- 382

Query: 393 LQDFDSTGNIKLSFGKK 409
                  GN  +  GKK
Sbjct: 383 -----VKGNYVIQLGKK 394


>gi|257790356|ref|YP_003180962.1| tyrosyl-tRNA synthetase [Eggerthella lenta DSM 2243]
 gi|257474253|gb|ACV54573.1| tyrosyl-tRNA synthetase [Eggerthella lenta DSM 2243]
          Length = 403

 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 88/272 (32%), Positives = 140/272 (51%), Gaps = 16/272 (5%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  L   Q  GH    ++G GT++IGDPS R+ +R  + S++I
Sbjct: 38  LGVDPTAPDIHLGHAVPLRKLRQFQDLGHGVTLIIGDGTALIGDPSGRNTTRPQLTSEQI 97

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           + N +    +  +F      KT AL  N+E WL S+   DLL+ + S F+V R+L  +  
Sbjct: 98  KANAQTY--VDQAFKILDPEKT-ALRYNSE-WLLSLNMEDLLK-LASNFTVARILERDDF 152

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R    Q +S  EF Y ++QAYD V +  +    +++GG+DQ  N++ G +L E++   
Sbjct: 153 HKRYTNSQPISLHEFLYPLMQAYDSVVIKAD----VELGGTDQLFNLLAGRELMEKMGME 208

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               LT PLL    G  KM K+    I L  E   P + +    +I D  +V + +  + 
Sbjct: 209 PQVCLTLPLLEGTDGVQKMSKSYGNYIGLTDE---PADMFGKVMSIPDELMVKYYRLASA 265

Query: 279 LPMSEIDRMAK-LQGKEI--NEAKKIIATEIT 307
           LP+ +ID + + L   E+  N+ K+ +A  I 
Sbjct: 266 LPVDQIDEIERGLAADELHPNKVKRALAKNIV 297


>gi|330815554|ref|YP_004359259.1| Tyrosyl-tRNA synthetase [Burkholderia gladioli BSR3]
 gi|327367947|gb|AEA59303.1| Tyrosyl-tRNA synthetase [Burkholderia gladioli BSR3]
          Length = 413

 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 102/372 (27%), Positives = 186/372 (50%), Gaps = 44/372 (11%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  +  LQ  GH  I L+G  TS+IGDPS R+ +R  +  ++I
Sbjct: 55  LGLDPTAPDIHIGHTVVLNKMRQLQDLGHTVIFLIGDFTSLIGDPSGRNATRPPLTREQI 114

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKY---------IDLLREIGSFFSV 150
           + N    K  F         +  AL+L+ E     I+Y          D + ++ S ++V
Sbjct: 115 EAN---AKTYF---------EQAALVLDREK--TEIRYNSEWSMPLGADGMIKLASRYTV 160

Query: 151 NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGI 210
            R+L  E    R +    +S  EF Y ++Q YD V L    +  L++GG+DQ  N++ G 
Sbjct: 161 ARILEREDFTKRFQGGVPISIHEFLYPLMQGYDSVAL----NADLELGGTDQKFNLLVGR 216

Query: 211 DLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADV 269
           +L ++        LT PLL    G  KM K+ +  + ++++   P + +    +I D  +
Sbjct: 217 ELQKQYGQEPQCILTMPLLEGLDGVEKMSKSKANYVGISEK---PTDMFGKLMSISDVLM 273

Query: 270 VSFAKRLTTLPMSEIDRM-AKLQ-GKEINEAKKIIATEITTMVHGREEAEKAATAAMECF 327
             + + L+  PM+EI R  A+++ G+   + K ++A EI    H + +AE+    A+E F
Sbjct: 274 WRYFELLSFRPMAEIARFKAEIEAGRNPRDFKVLLAQEIVARFHSQADAER----ALEDF 329

Query: 328 DMSIH---SQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSII 384
           +          +P +++    ++ G     L+ +AG   ST+EA R+++   +KI+ + +
Sbjct: 330 NHRAKGGVPDDIPAVTLGGAPLAIGQ----LLKQAGLVPSTSEALRNIEQGGVKIDGATV 385

Query: 385 SNEKLQIKLQDF 396
           S++ L+++  ++
Sbjct: 386 SDKGLKVEAGEY 397


>gi|307825818|ref|ZP_07656034.1| tyrosyl-tRNA synthetase [Methylobacter tundripaludum SV96]
 gi|307733126|gb|EFO03987.1| tyrosyl-tRNA synthetase [Methylobacter tundripaludum SV96]
          Length = 398

 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 102/363 (28%), Positives = 173/363 (47%), Gaps = 35/363 (9%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   +  L   Q+ GH+ + L+G  T +IGDP+ ++ +R+ +   E+ 
Sbjct: 37  GFDPTAPDLHLGHTVLINKLKQFQELGHEVLFLIGDFTGMIGDPTGKNVTRKPLTRDEVI 96

Query: 101 ENI----EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSF 156
           +N     E+I  I          KT  L++ N +W+ ++   DL+ ++ +  +V RML  
Sbjct: 97  DNARTYEEQIFKILDP------AKT--LVMFNSSWMNAMSPADLI-QLAAKHTVARMLER 147

Query: 157 ESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL 216
           +    R K  Q ++  EF Y ++Q YD V +  +    +++GG+DQ  N++ G  L E  
Sbjct: 148 DDFSKRFKGGQPIAIHEFLYPLIQGYDSVAMKAD----VELGGTDQKFNLLVGRQLQEAF 203

Query: 217 KTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKR 275
                  +T P+L    G  KM K+L+  + +     S  + +    +I D  +  + + 
Sbjct: 204 GQKPQVVMTMPILEGLDGVQKMSKSLNNYVGI---ADSADDMFGKLMSISDELMWRYFEL 260

Query: 276 LTTLPMSEIDRMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS 333
           L+  PM+EI   A+   QG    + K  +A EI    H       AA  A+E F+     
Sbjct: 261 LSFRPMTEIGLWAEECKQGANPRDYKVKLAQEIIERFHD----AAAAVKALENFEARFQR 316

Query: 334 QHMPTISISKDEVS-----RGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEK 388
             MP      DE+         G+  ++   G   ST+EA R +K  A+KI+   +S++K
Sbjct: 317 GAMPD---EMDELELKIEGTSYGIANILKDTGLTESTSEANRMIKQGAVKIDGEKVSDQK 373

Query: 389 LQI 391
           L+I
Sbjct: 374 LEI 376


>gi|308062095|gb|ADO03983.1| tyrosyl-tRNA synthetase [Helicobacter pylori Cuz20]
          Length = 402

 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 104/377 (27%), Positives = 177/377 (46%), Gaps = 34/377 (9%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   +  L  LQ+ G +   L+G  T++IGDP+ ++E+R+ +  +++ 
Sbjct: 44  GFDPTAPDLHLGHTVLIQKLALLQQYGARVKFLIGDFTAMIGDPTGKNETRKPLNREQVL 103

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           EN +     +   I     +    +  N TWL ++    ++ E+ + FSV RML  +   
Sbjct: 104 ENAK----TYEEQIYKILDQKHTEVCFNSTWLDALGAKGII-ELCAKFSVARMLERDDFT 158

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R K  + +S +EF Y +LQ YD V +    D  +++GG+DQ  N++ G  L       K
Sbjct: 159 KRYKENRPISIVEFLYPLLQGYDSVAM----DADIELGGNDQKFNLLVGRFLQRAYGLNK 214

Query: 221 -LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               +T PLL    G  KM K+L   + + +E   P   +    ++ D  +  +   L+ 
Sbjct: 215 EQSVITMPLLEGLDGVQKMSKSLGNYVGITEE---PNAMFGKIMSVSDDLMWRYYTLLSA 271

Query: 279 LPMSEIDRMAK------LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIH 332
             + EI+ +        L  K + E    +A EI    +  ++A KA     E F     
Sbjct: 272 KTLEEIEDLKHGILNQTLHPKAVKED---LAGEIVARYYDNDQAIKAK----EQFSKVFS 324

Query: 333 SQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
           +  +P I +  D    G+G+L ++ + GF  ST++ARR ++   +KIN   I +E  +  
Sbjct: 325 ANLLPEILLESD-FDEGVGILDVLKQIGFCPSTSQARRDIQGGGVKINQEAIKDEGYRF- 382

Query: 393 LQDFDSTGNIKLSFGKK 409
                  GN  +  GKK
Sbjct: 383 -----VKGNYVIQLGKK 394


>gi|89099473|ref|ZP_01172349.1| tyrosyl-tRNA synthetase [Bacillus sp. NRRL B-14911]
 gi|89085859|gb|EAR64984.1| tyrosyl-tRNA synthetase [Bacillus sp. NRRL B-14911]
          Length = 415

 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 99/360 (27%), Positives = 170/360 (47%), Gaps = 21/360 (5%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D +A  +H GH   L  L   Q+ GH    ++G  T  IGDP+ +  +R+ +  +E+
Sbjct: 54  LGLDPSAPDVHLGHTVVLNKLKQFQENGHTIQLIIGDFTGKIGDPTGKSAARKQLNDEEV 113

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           + N E     F   +  G     A +  N  WL ++   D++ E+    +V R+L     
Sbjct: 114 KHNAETYFEQFGKVLDMGK----AELHYNSKWLSALHLQDVI-ELAGKITVARLLERNDF 168

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             RL   + +S  EF Y ++Q YD V L    +  +++GG+DQ  N++ G  L E     
Sbjct: 169 SERLGAGKPISLHEFFYPLMQGYDSVML----ESDIELGGNDQHFNVLMGRHLQEHYGKE 224

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
           K   +  PLL    G  KM K+ +  I ++++   P + +    +I D  +  + +  T+
Sbjct: 225 KQVVILVPLLEGLDGKEKMSKSKNNYIGVDEK---PEDMYGKAMSIPDELMEKYFRLATS 281

Query: 279 LPMSE-IDRMAKLQGKEIN--EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQH 335
           LP++E +    KL+   ++  +AK  +A  I +M HG E AEKA       F      + 
Sbjct: 282 LPLAEKMSIQEKLEEGSLHPRDAKMQLARTIVSMYHGHEAAEKAEDHFKSVFQQGSMPED 341

Query: 336 MPTIS-ISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
           MP ++    DE      LL L++ AGF  S +EAR  + +  +++N     +   ++ LQ
Sbjct: 342 MPALTWDGSDEPD----LLELLMFAGFFPSRSEARWMVLNGGVRMNGEKAEDINTKVSLQ 397


>gi|319942888|ref|ZP_08017171.1| tyrosine--tRNA ligase [Lautropia mirabilis ATCC 51599]
 gi|319743430|gb|EFV95834.1| tyrosine--tRNA ligase [Lautropia mirabilis ATCC 51599]
          Length = 406

 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 101/359 (28%), Positives = 173/359 (48%), Gaps = 28/359 (7%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  LH GH   L  +  LQ  GH+ I L+G  T+ IGDPS R+ +R  +  ++I
Sbjct: 49  LGLDPTAPDLHLGHTVVLNKMRQLQDLGHQVIFLIGDFTASIGDPSGRNSTRPPLTREQI 108

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           ++N +       + +     +T+  +  N  W   I   D++ ++ S ++V R+L  +  
Sbjct: 109 EQNAQTY--FRQASLVLDPERTE--IRYNSAWCDKIGLRDMV-QLASRYTVARILERDDF 163

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             RLK    +S  E  Y +LQ YD V L  +    L++GG+DQ  N++ G +L       
Sbjct: 164 TKRLKAGVPISVHEMLYPLLQGYDSVVLEAD----LELGGTDQKFNLLVGRELQREYGKE 219

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYN-FWQYWRNIDDADVVSFAKRLT 277
               LT PLL    G  KM K+    + +    T P N  +    +I DA +  +   L+
Sbjct: 220 PQCVLTMPLLEGLDGVEKMSKSKGNYVGI----TEPANTMFAKVMSISDAMMWRYFTLLS 275

Query: 278 TLPMSEID--RMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIH--- 332
             PMSEID  R     G+   EAK ++A E+    HG      ++ AA+E F++      
Sbjct: 276 FRPMSEIDALRAECEAGRNPKEAKVLLARELVERFHG----AGSSDAAVEDFELRARGGV 331

Query: 333 SQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
              +  +++S       +G++ ++  +G   S +EA R L  N ++++ S++++  L +
Sbjct: 332 PDEIEEVTLS----GAPLGIVAVLRDSGLVPSASEAGRMLAQNGVRVDGSVVTDRGLTL 386


>gi|282850352|ref|ZP_06259731.1| tyrosine--tRNA ligase [Veillonella parvula ATCC 17745]
 gi|282579845|gb|EFB85249.1| tyrosine--tRNA ligase [Veillonella parvula ATCC 17745]
          Length = 402

 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 104/362 (28%), Positives = 173/362 (47%), Gaps = 24/362 (6%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  L   Q+ GH+ + ++GG T+ IGDP+ +  +R  +  +E+
Sbjct: 42  LGLDPTAPDIHLGHTVPLRKLRLFQEFGHQVVIVIGGFTARIGDPTGKSVTRPPLTKEEV 101

Query: 100 QENIEKIK-GIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
            +N E  K  IF       T     ++ +N  WL S+ + D+LR + S ++V RM+  + 
Sbjct: 102 LKNAETYKTQIFKVLDPEKT-----IVRDNSEWLESMNFADVLR-LASSYTVARMMERDD 155

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
              R K  + +   EF Y ++Q +D V L  +    ++ GG+DQ  N++ G  L E    
Sbjct: 156 FSKRFKEGRPIGVHEFMYPLMQGHDSVALHAD----VEFGGTDQTFNLLMGRHLQELEGQ 211

Query: 219 PKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT 277
                +T PLL    G  KM K+L   I +++E   P   +    +I D  ++ +   +T
Sbjct: 212 EPQVVITMPLLEGLDGIQKMSKSLGNYIGIDEE---PKEMYGKAMSIPDELMMRYFMLVT 268

Query: 278 TLPMSEIDRMAK-LQGKEIN--EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQ 334
            + + E + MAK L+  E++  +AK  +A  I  + HG E A +A       F       
Sbjct: 269 DMSIEEQEDMAKRLESGELHPRDAKMQLARTIVRLYHGEEAALEAEEEFKRVFQQRAMPT 328

Query: 335 HMPT-ISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL 393
            +P  + ++  E    + +      AG   S  EARR +K+ A K+N    + E L  KL
Sbjct: 329 DVPEYVMVAPIE---PIFVPQFCTDAGLTASNGEARRSIKAGAFKVNGEKYTEENL--KL 383

Query: 394 QD 395
           +D
Sbjct: 384 ED 385


>gi|188591234|ref|YP_001795834.1| tyrosyl-tRNA synthetase [Cupriavidus taiwanensis LMG 19424]
 gi|170938128|emb|CAP63114.1| TYROSYL-TRNA SYNTHETASE [Cupriavidus taiwanensis LMG 19424]
          Length = 413

 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 101/376 (26%), Positives = 177/376 (47%), Gaps = 32/376 (8%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  L  LQ  GH+ I L+G  TS IGDPS R+ +R  +  ++I
Sbjct: 56  LGLDPTAPDIHIGHTVVLNKLRQLQDLGHQVIFLIGDFTSTIGDPSGRNSTRPPLTREQI 115

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           + N +      S  +     +T+  +  N  W C       + ++ + ++V RM+  +  
Sbjct: 116 EANAQTYYRQASLVLD--PARTE--IRYNSEW-CDPLGARGMIQLAAKYTVARMMERDDF 170

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R +    +S  EF Y ++Q YD V L  +    L++GG+DQ  N++ G +L +     
Sbjct: 171 TKRFRSGIPISVHEFLYPLMQGYDSVALKSD----LELGGTDQKFNLLVGRELQKEYGQE 226

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               LT PLL    G  KM K+    + + +   +P   +    +I D  +  +   L+ 
Sbjct: 227 PQCILTMPLLVGLDGVEKMSKSKGNYVGVTE---APNEMFGKLMSISDDLMWQYFTLLSF 283

Query: 279 LPMSEIDRMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIH---S 333
            PMSEID M +    G+   + K ++A EI    H + +AEK    A+E F+        
Sbjct: 284 RPMSEIDLMKQEIAAGRNPRDCKVLLAQEIVARFHSQADAEK----ALEDFNHRARGGVP 339

Query: 334 QHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL 393
             +P +S+        +G+  L+ +A    ST+EA R+++   +KI+ + +S++  ++  
Sbjct: 340 DDIPAVSLE----GAPLGIAQLLKQANLVPSTSEANRNIEQGGVKIDGATVSDKATRV-- 393

Query: 394 QDFDSTGNIKLSFGKK 409
               + G   +  GK+
Sbjct: 394 ----AAGTYVVQVGKR 405


>gi|167564069|ref|ZP_02356985.1| tyrosyl-tRNA synthetase [Burkholderia oklahomensis EO147]
 gi|167571213|ref|ZP_02364087.1| tyrosyl-tRNA synthetase [Burkholderia oklahomensis C6786]
          Length = 413

 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 106/372 (28%), Positives = 183/372 (49%), Gaps = 44/372 (11%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  +  LQ  GH  I L+G  TS+IGDPS R+ +R  +  ++I
Sbjct: 55  LGLDPTAPDIHIGHTVVLNKMRQLQDLGHTVIFLIGDFTSLIGDPSGRNATRPPLTREQI 114

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKY---------IDLLREIGSFFSV 150
           + N    K  F         +  AL+L+ E     I+Y          D + ++ S ++V
Sbjct: 115 ESN---AKTYF---------EQAALVLDREK--TEIRYNSEWSMPLGADGMIKLASRYTV 160

Query: 151 NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGI 210
            RML  E    R +    +S  EF Y ++Q YD V L  N D  L++GG+DQ  N++ G 
Sbjct: 161 ARMLEREDFTKRFQGGIPISIHEFLYPLMQGYDSVAL--NAD--LELGGTDQKFNLLVGR 216

Query: 211 DLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADV 269
           +L ++    +   LT PLL    G  KM K+    + ++++   P + +    +I D  +
Sbjct: 217 ELQKQYGQEQQCILTMPLLEGLDGVEKMSKSKGNYVGISEK---PTDMFGKLMSISDVLM 273

Query: 270 VSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECF 327
             + + L+   + EI   R     G+   + K ++A EI    H R EAE+    A+E F
Sbjct: 274 WRYFELLSFRSLDEIAQFRAEAEGGRNPRDFKVMLAQEIVERFHSRAEAER----ALEDF 329

Query: 328 DMSIH---SQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSII 384
           +          +PT++++   ++ G     L+ +AG   ST+EA R+++   +KI+ + +
Sbjct: 330 NHRAKGGVPDDIPTVTLTGAPLAIGQ----LLKQAGLVPSTSEALRNIEQGGVKIDGATV 385

Query: 385 SNEKLQIKLQDF 396
           S++ L+++  +F
Sbjct: 386 SDKALKVEAGEF 397


>gi|94265281|ref|ZP_01289039.1| Tyrosyl-tRNA synthetase, class Ib [delta proteobacterium MLMS-1]
 gi|93454215|gb|EAT04533.1| Tyrosyl-tRNA synthetase, class Ib [delta proteobacterium MLMS-1]
          Length = 411

 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 102/378 (26%), Positives = 173/378 (45%), Gaps = 33/378 (8%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   +  +   Q+ GH+   L+G  T +IGDP+ + E+R+ +  +E+ 
Sbjct: 50  GFDPTAPDLHLGHTVLVQKMKHFQELGHEIYFLIGDFTGMIGDPTGKSETRKPLTPEEVT 109

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
            N E  K     F      +T  +   N  WL  +   D++R + S  +V RML  E  +
Sbjct: 110 ANAETYKE--QVFKILDPARTRVVF--NSVWLDKLSPRDMIR-LASQLTVARMLEREDFK 164

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R   E+++   EF Y ++Q YD V LA +    +++GG+DQ  N++ G DL        
Sbjct: 165 QRFVNEKAIGIHEFMYPLIQGYDSVALAAD----VELGGTDQLFNLLTGRDLQRVWGQEP 220

Query: 221 LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTL 279
              LT PLL    G  KM K+L   I + +   S  + +    ++ D  +  + + L+ L
Sbjct: 221 QVVLTMPLLEGLDGVNKMSKSLDNYIGITE---SADDIYGKTLSMPDDLMFRYYELLSDL 277

Query: 280 PMSEIDRM------AKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS 333
              EI  +       KL  K +   K+ +A E+    +    A +A       F      
Sbjct: 278 SQLEIADLQQGVGSGKLHPKAV---KQRLARELVARFYDEPAARRAEDNFERVFKQHQAP 334

Query: 334 QHMPTISISKDEVSRGMG--LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
           + +P +++    V+ G    L  L+V AG    T EARR +K  A+ I+   ++++   +
Sbjct: 335 EDVPELTL----VAGGEPCWLPRLLVDAGLVKGTGEARRLIKQRAVSIDGEKVADDSATV 390

Query: 392 KLQDFDSTGNIKLSFGKK 409
                 ++G + L  GK+
Sbjct: 391 A-----TSGEVLLKVGKR 403


>gi|322437050|ref|YP_004219262.1| tyrosyl-tRNA synthetase [Acidobacterium sp. MP5ACTX9]
 gi|321164777|gb|ADW70482.1| tyrosyl-tRNA synthetase [Acidobacterium sp. MP5ACTX9]
          Length = 424

 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 106/391 (27%), Positives = 176/391 (45%), Gaps = 31/391 (7%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   +  L   Q+ GH  I L+G  T++IGDP+ + ++R+ +   EI 
Sbjct: 48  GFDPTAPDLHLGHTVLMRKLRHFQQLGHTVIFLIGDSTALIGDPTGKSQTRKQLTQAEID 107

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
            N E  K     F      KT+  +  N  WL  + + D++R + +  +V++ML  E   
Sbjct: 108 ANAETYKQ--QVFRILDESKTE--VRYNSEWLAKLGFADMIR-LAAKATVSQMLEREDFH 162

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R   E+ +S  E  Y + Q YD V L    +C +++GG+DQ  N++ G  L        
Sbjct: 163 QRFNNEEPISLHELLYPLAQGYDSVAL----ECDVELGGTDQKFNLLMGRRLQRDAGQLP 218

Query: 221 LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTL 279
              L +P+L    G  KM K+L  A+ +     SP++ +     I DA +  +   LT L
Sbjct: 219 QIVLMTPILEGLDGVQKMSKSLGNAVGVED---SPFDMFTKLMTIPDALIGRYFTFLTDL 275

Query: 280 PMSEIDRMAK--LQGK-EINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM 336
             ++I  + +  + G+    +AK+ +A  I    H  E A  A     + F     S  +
Sbjct: 276 LPAQIAVIEEQIVAGQLHPMQAKRDLARTIVEGFHTLEVAAHAEENWSKQFQQGGVSDDI 335

Query: 337 PTISISKDEVSRG-------------MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSI 383
             + I++ E++               + L  L+V  G   S +EA R L+  A+KI+  +
Sbjct: 336 EEVGITQAEIAGPEAHNAQDGVTGFTIKLPPLLVHCGLCPSNSEATRKLREGAVKIDGEV 395

Query: 384 ISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
             +  +Q  L     T  I+L    K  +I 
Sbjct: 396 QKDAVMQ--LASLPVTLTIRLGKKAKRAVIT 424


>gi|15611778|ref|NP_223429.1| tyrosyl-tRNA synthetase [Helicobacter pylori J99]
 gi|11135060|sp|Q9ZL69|SYY_HELPJ RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|4155267|gb|AAD06286.1| TYROSYL-TRNA SYNTHETASE [Helicobacter pylori J99]
          Length = 402

 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 103/377 (27%), Positives = 180/377 (47%), Gaps = 34/377 (9%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   +  L  LQ+ G +   L+G  T++IGDP+ ++E+R+ +  +++ 
Sbjct: 44  GFDPTAPDLHLGHTVLIQKLALLQQYGARVKFLIGDFTAMIGDPTGKNETRKPLNREQVL 103

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           EN +  K       K    K   +  N+  WL ++    ++ E+ + FSV RML  +   
Sbjct: 104 ENAKTYK---EQIYKILDQKHTEVCFNS-AWLDALGAKGMI-ELCAKFSVARMLERDDFA 158

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R K  + +S +EF Y +LQ YD V +  +    +++GG+DQ  N++ G  L       K
Sbjct: 159 KRYKENRPISIVEFLYPLLQGYDSVAMGAD----IELGGNDQKFNLLVGRFLQRAYGLNK 214

Query: 221 LFA-LTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
             + +T PLL    G  KM K+L   + + +E   P   +    ++ D  +  +   L+ 
Sbjct: 215 EQSIITMPLLEGLDGVQKMSKSLGNYVGITEE---PNAMFGKIMSVSDDLMWRYYTLLSA 271

Query: 279 LPMSEIDRMAK------LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIH 332
             + EI+ +        L  K + E    +A+EI    +  ++A KA     E F     
Sbjct: 272 KTLEEIEDLKHGILHQTLHPKAVKED---LASEIVARYYDNDQAFKAK----EQFSKVFS 324

Query: 333 SQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
           +  +P I +  D    G+G+L ++ + GF  ST++ARR ++   +KIN  ++ +E  +  
Sbjct: 325 ANLLPEILLESD-FDEGVGVLDVLKQIGFCPSTSQARRDIQGGGVKINQEVVKDESYRF- 382

Query: 393 LQDFDSTGNIKLSFGKK 409
                  GN  +  GKK
Sbjct: 383 -----VKGNYVIQLGKK 394


>gi|313199844|ref|YP_004038502.1| tyrosyl-tRNA synthetase [Methylovorus sp. MP688]
 gi|312439160|gb|ADQ83266.1| tyrosyl-tRNA synthetase [Methylovorus sp. MP688]
          Length = 402

 Score =  121 bits (303), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 102/362 (28%), Positives = 174/362 (48%), Gaps = 34/362 (9%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   L  L  LQ+ GH  + L+G  T +IGDP+ +  +R  + ++++Q
Sbjct: 39  GFDPTAPDLHLGHTVLLNKLRQLQELGHHVLFLIGDFTGMIGDPTGKSATRPPLTAEQVQ 98

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           EN +  +      +K    +T+ +   N  W+  +    +L+ + +  +V RML  +   
Sbjct: 99  ENAKSYEAQVFKILK--PEQTEVVF--NSAWISQLGAAGMLK-LAATHTVARMLERDDFS 153

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R K  Q ++  EF Y +LQ YD VEL  +    L++GG+DQ  N++ G +L +      
Sbjct: 154 KRYKNNQPIAIHEFLYPLLQGYDSVELKAD----LELGGTDQKFNLLMGRELQKHYGQSP 209

Query: 221 LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYN-FWQYWRNIDDADVVSFAKRLTT 278
              LT PLL    G  KM K+L   I +      P N  +    +I D  +  + + L+ 
Sbjct: 210 QCVLTMPLLEGLDGVNKMSKSLGNYIGI----AEPANDIFSKLMSISDTLMWRYIELLSF 265

Query: 279 LPMSEID--RMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQ-- 334
             M  I   + +   G+     K   A E+ T  H  E AE+A        D S+ S+  
Sbjct: 266 ESMETIASWKQSVEAGENPRNIKVRFAQELVTRFHSAEAAEQALA------DFSLRSKGG 319

Query: 335 ---HMPTISI--SKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKL 389
               +P +SI  ++D +    G+  L+ +AG   ST+EA R ++   +K+++  + ++ L
Sbjct: 320 IPDDVPEVSIALAQDRI----GIAALLKQAGLVASTSEALRMIEQGGVKLDSEKVEDKAL 375

Query: 390 QI 391
           Q+
Sbjct: 376 QL 377


>gi|160878919|ref|YP_001557887.1| tyrosyl-tRNA synthetase [Clostridium phytofermentans ISDg]
 gi|160427585|gb|ABX41148.1| tyrosyl-tRNA synthetase [Clostridium phytofermentans ISDg]
          Length = 402

 Score =  121 bits (303), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 90/349 (25%), Positives = 173/349 (49%), Gaps = 18/349 (5%)

Query: 36  VTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMR 95
           +T  +G D +A  +H GH   L  +  +Q  GH+ I ++G  T  IGDP+ + ++R+ + 
Sbjct: 38  LTIKLGLDPSAPDIHLGHTVVLRKIKQMQDLGHRAIIIIGDFTGRIGDPTGKSKTRKPLT 97

Query: 96  SQEIQENIEK-IKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRML 154
            ++++EN    ++ IF    +  T     +  N+E WL  + +  ++  + S  +V R+L
Sbjct: 98  DEQVKENAATYMEQIFKVLDREKT----EVRFNSE-WLSKLNFEQVI-SLASSMTVARLL 151

Query: 155 SFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
             +  ++R K ++++   EF Y ++Q YD VE+  +    +++GG+DQ  NI+ G  L +
Sbjct: 152 ERDDFQNRYKNQEAIGLHEFFYPLMQGYDSVEIKAD----IELGGTDQTFNILMGRTLQK 207

Query: 215 RLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFA 273
            +   +  A+  P+L    G  KM K+L   I +++   SP   ++    + D  +  + 
Sbjct: 208 SVGMSQQIAMFMPILEGLDGIEKMSKSLGNYIGVSE---SPQVMFKKVMEVPDQLIFRYF 264

Query: 274 KRLTTLPMSEID--RMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSI 331
           + +T     +I+  R+   QGK   + K I+A  IT + HG E A+       + F    
Sbjct: 265 ELVTDEHPDDIEKLRIEMEQGKNPRDIKLILARIITNLYHGEEGAKAGEEYFEQVFKEGE 324

Query: 332 HSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKIN 380
             + MP I + K++ S    +  ++   G   S +E RR +K   +++N
Sbjct: 325 IPEDMPVIKLEKEQDSLA-SVAGVLASEGLVPSASEFRRLIKQGGVQLN 372


>gi|253997780|ref|YP_003049843.1| tyrosyl-tRNA synthetase [Methylovorus sp. SIP3-4]
 gi|253984459|gb|ACT49316.1| tyrosyl-tRNA synthetase [Methylovorus sp. SIP3-4]
          Length = 400

 Score =  121 bits (303), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 102/362 (28%), Positives = 174/362 (48%), Gaps = 34/362 (9%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   L  L  LQ+ GH  + L+G  T +IGDP+ +  +R  + ++++Q
Sbjct: 39  GFDPTAPDLHLGHTVLLNKLRQLQELGHHVLFLIGDFTGMIGDPTGKSATRPPLTAEQVQ 98

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           EN +  +      +K    +T+ +   N  W+  +    +L+ + +  +V RML  +   
Sbjct: 99  ENAKSYEAQVFKILK--PEQTEVVF--NSAWISQLGAAGMLK-LAATHTVARMLERDDFS 153

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R K  Q ++  EF Y +LQ YD VEL  +    L++GG+DQ  N++ G +L +      
Sbjct: 154 KRYKNNQPIAIHEFLYPLLQGYDSVELKAD----LELGGTDQKFNLLMGRELQKHYGQSP 209

Query: 221 LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYN-FWQYWRNIDDADVVSFAKRLTT 278
              LT PLL    G  KM K+L   I +      P N  +    +I D  +  + + L+ 
Sbjct: 210 QCVLTMPLLEGLDGVNKMSKSLGNYIGI----AEPANDIFSKLMSISDTLMWRYIELLSF 265

Query: 279 LPMSEID--RMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQ-- 334
             M  I   + +   G+     K   A E+ T  H  E AE+A        D S+ S+  
Sbjct: 266 ESMETIASWKQSVEAGENPRNIKVRFAQELVTRFHSAEAAEQALA------DFSLRSKGG 319

Query: 335 ---HMPTISI--SKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKL 389
               +P +SI  ++D +    G+  L+ +AG   ST+EA R ++   +K+++  + ++ L
Sbjct: 320 IPDDVPEVSIALAQDRI----GIAALLKQAGLVASTSEALRMIEQGGVKLDSEKVEDKAL 375

Query: 390 QI 391
           Q+
Sbjct: 376 QL 377


>gi|149182242|ref|ZP_01860722.1| tyrosyl-tRNA synthetase [Bacillus sp. SG-1]
 gi|148850011|gb|EDL64181.1| tyrosyl-tRNA synthetase [Bacillus sp. SG-1]
          Length = 415

 Score =  121 bits (303), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 96/360 (26%), Positives = 170/360 (47%), Gaps = 19/360 (5%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D +A  +H GH   L  +   Q+ GH    ++G  T  IGDP+ +  +R+ +  +E+
Sbjct: 54  LGLDPSAPDVHIGHTVVLNKMRQFQQNGHIVQLIIGDFTGKIGDPTGKSAARKQLTDEEV 113

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           + N +     F  F K    K    +  N  WL ++   D++   GS  +V R+L     
Sbjct: 114 KHNAQT---YFEQFGKV-LDKEKVELFYNSKWLKNLNLEDVIHLAGS-ITVARLLERNDF 168

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             RL   + +S  EF Y ++Q YD V L    +  +++GG+DQ  N++ G  L E     
Sbjct: 169 SERLAAGKPISLHEFFYPLMQGYDSVVL----ESDIELGGTDQHFNVLMGRGLQEHYGKE 224

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
           K   +  PLL    G  KM K+    I +++   +P   +    +I D  ++ + +  T 
Sbjct: 225 KQVVMMLPLLEGLDGKEKMSKSKHNYIGIDE---APSEMFGKTMSIPDELMMKYFELATD 281

Query: 279 LPMSEIDRMAK-LQGKEIN--EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQH 335
           L + E + + + L+   ++  +AK ++   +  M H  E AEKA T     F      + 
Sbjct: 282 LSLEEKNSIGENLENGTLHPRDAKMLLGRTLVRMYHSEEAAEKAQTQFKAVFQKGAVPED 341

Query: 336 MPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           +P +  +K   SR + ++ L+V+     S +EARR + +  +KIN S + +  L++ L D
Sbjct: 342 IPVVHWNK---SREISVVELLVELKMMKSKSEARRMIGNGGVKINGSKVEDPALEVSLAD 398


>gi|311103888|ref|YP_003976741.1| tyrosyl-tRNA synthetase [Achromobacter xylosoxidans A8]
 gi|310758577|gb|ADP14026.1| tyrosyl-tRNA synthetase [Achromobacter xylosoxidans A8]
          Length = 409

 Score =  121 bits (303), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 98/355 (27%), Positives = 171/355 (48%), Gaps = 19/355 (5%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  +  LQ  GH  I L+G  TS IGDPS R+ +R  +  ++I
Sbjct: 50  LGLDPTAPDIHLGHTVVLNKMRQLQDMGHNVIFLIGDFTSTIGDPSGRNNTRPPLTREQI 109

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           + N +      S  +     +T+  +  N  W C       + ++ S ++V RM+  E  
Sbjct: 110 ESNAKTYYAQASLVLD--PARTE--IRYNSEW-CDPLGARGMIQLASRYTVARMMEREDF 164

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R K    +S  EF Y ++Q YD V L  +    L++GG+DQ  N++ G +L +     
Sbjct: 165 TKRFKGGIPISVHEFLYPLMQGYDSVALKSD----LELGGTDQKFNLLVGRELQKEYGQE 220

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               LT PLL    G  KM K+    I +++   SP + +    +I D  +  + + L+ 
Sbjct: 221 PQCILTMPLLVGTDGVEKMSKSKGNYIGISE---SPDSMFGKLMSISDTLMWRYFELLSF 277

Query: 279 LPMSEIDRMAKL--QGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM 336
             + +I  + +    G+   +AK ++A EI T  H  + A++A  +    F      + M
Sbjct: 278 RTLEDIAALKQEIDGGRNPRDAKVMLAQEIITRFHSAKAADEALASFEARFRDGAIPEDM 337

Query: 337 PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
           P ++I    V    G+L L+ +AG   S +EA+R+++   +++N   + ++ LQ+
Sbjct: 338 PEVNIGGAPV----GILKLLREAGLVASGSEAQRNVEQGGVRVNGDRVEDKSLQL 388


>gi|224438178|ref|ZP_03659113.1| tyrosyl-tRNA synthetase [Helicobacter cinaedi CCUG 18818]
 gi|313144623|ref|ZP_07806816.1| tyrosyl-tRNA synthetase [Helicobacter cinaedi CCUG 18818]
 gi|313129654|gb|EFR47271.1| tyrosyl-tRNA synthetase [Helicobacter cinaedi CCUG 18818]
          Length = 400

 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 107/374 (28%), Positives = 178/374 (47%), Gaps = 28/374 (7%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   L  L   QK G     L+G  T+ IGDPS + E+R+ +  ++++
Sbjct: 42  GFDPTAPDLHLGHTVLLQKLATFQKYGGDVKFLIGDFTATIGDPSGKSETRKPLSKEQVE 101

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
            N    K       K    K   +  N++ WL  +    ++  + S FSV RML  +   
Sbjct: 102 ANAITYK---EQVFKVLDPKYTEVCFNSK-WLSELGAGGIIH-LTSKFSVARMLERDDFT 156

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R    Q +S +EF Y +LQ YD V L    +C +++GG+DQ  N++ G  L       K
Sbjct: 157 KRYNNNQPISMVEFMYPLLQGYDSVAL----ECDIELGGNDQKFNLLVGRSLQRSYGLDK 212

Query: 221 -LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               +T PLL    G  KM K+L+  I + +   S    +    +I D  +  + + L++
Sbjct: 213 EQSVMTMPLLEGLDGVNKMSKSLNNYIGVTE---SANTMYAKILSISDEMMWRYYELLSS 269

Query: 279 LPMSEIDRM-AKLQGKEIN--EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQH 335
           L + EI  + A+++ ++ +    K+ +A EIT   H  + A+KA       F        
Sbjct: 270 LSLQEIAELKAQVESQKAHPKSVKEQLALEITQRYHNIDLAKKAKIEFDNVFSKDEIPAD 329

Query: 336 MPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           + T +  KDE      +  ++  A    ST++ARR +++ A+KIN   I++E L++    
Sbjct: 330 LATFTCEKDE-----WIAKVLTYAQLCESTSQARRDIRAGAVKINKEKITDENLKL---- 380

Query: 396 FDSTGNIKLSFGKK 409
             S+G   +  GK+
Sbjct: 381 --SSGEYIVQIGKR 392


>gi|297170882|gb|ADI21900.1| tyrosyl-tRNA synthetase [uncultured gamma proteobacterium
           HF0130_26L16]
          Length = 405

 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 107/389 (27%), Positives = 181/389 (46%), Gaps = 19/389 (4%)

Query: 5   KSDFLSILSE--RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
           KS F  +L+E  RG    +     L+ L S   +   +G+D TA  LH GH   +  +  
Sbjct: 7   KSAFQEVLAELKRGVEEMLLEEELLERLASNRPLRIKVGFDPTAPDLHLGHTVIINKMRQ 66

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD 122
            Q+ GH+ + L+G  T +IGDPS ++ +R  + ++EI+ N    K     F      KT 
Sbjct: 67  FQELGHEVVFLIGDFTGMIGDPSGKNVTRPPLTTEEIESNAVTYKA--QVFRILDPDKTQ 124

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
                N  W   +    ++R + S  +V RML  +    R K  Q ++  EF Y ++Q Y
Sbjct: 125 VEF--NSKWCSELGAEGIIR-LASRHTVARMLERDDFSKRYKSGQPIAIHEFLYPLMQGY 181

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTL 241
           D V L  +    ++MGG+DQ  N++ G +L ++   P    +T PLL    G  KM K+L
Sbjct: 182 DSVALKTD----VEMGGTDQKFNLLVGRELQKQYGQPSQVVITLPLLEGLDGVQKMSKSL 237

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN--EAK 299
              + +     +P + +    +I D  +  + + L+   + EI+++ +  G   N  + K
Sbjct: 238 GNIVGIT---DAPDDMFGKLMSISDDLMWRYFELLSFKSLPEIEKLRESVGSGANPRDVK 294

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKA 359
             +A EI    H     +KA    +E F        +   ++  D    G+G+ + I +A
Sbjct: 295 FELAREIVDRFHAPGGGKKAEQRFVERFSQGSVPDDLEEKALLSD--GDGLGIASAIKQA 352

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEK 388
           G ATST+EA R +K  A++     + + K
Sbjct: 353 GLATSTSEAIRLIKQGAVRFAGERLEDPK 381


>gi|221133486|ref|ZP_03559791.1| tyrosyl-tRNA synthetase [Glaciecola sp. HTCC2999]
          Length = 399

 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 101/358 (28%), Positives = 176/358 (49%), Gaps = 25/358 (6%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   +  L   Q+ GH+ I L+G  T +IGDP+ ++ +R+ +  +++ 
Sbjct: 39  GFDPTAPDLHLGHTVLINKLRTFQQLGHEVIFLIGDFTGLIGDPTGKNVTRKPLSKEDVL 98

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
            N E  K     F      KT  +  N+E W+ ++    +++ + +  +V RML  +  +
Sbjct: 99  ANAETYKE--QVFKILDPAKT-TVRFNSE-WMDALGAAGMIK-LAASQTVARMLERDDFK 153

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL----GERL 216
            R    Q ++  EF Y ++Q +D V L    +  +++GG+DQ  N++ G +L    G+R 
Sbjct: 154 KRYGNNQPIAIHEFLYPLVQGWDSVAL----ESDVELGGTDQRFNLLMGRELQKSQGQRQ 209

Query: 217 KTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKR 275
           +T     L  PLL    G  KM K+L+  I +     +P + +    +I D  +  +   
Sbjct: 210 QT----VLMMPLLEGLDGVQKMSKSLNNYIGIT---DAPNDMFGKIMSISDDLMWRYFDL 262

Query: 276 LTTLPMSEIDRM-AKLQGKEINEAKKI-IATEITTMVHGREEAEKAATAAMECFDMSIHS 333
           L+  P++EID + A ++G       KI +A EI    H    AE A    ++ F  +   
Sbjct: 263 LSFRPIAEIDALKAAVEGGANPRDTKIELAKEIIARFHDDAAAEGAHQDFIQRFQKNAIP 322

Query: 334 QHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
             MP +++  +     MG+  L+  A    ST++A R +K  A+KIN   + + KLQ+
Sbjct: 323 DDMPEVTVHLE--GEAMGIANLLKAANLVNSTSDAMRMIKQGAVKINGDKVEDTKLQL 378


>gi|237752626|ref|ZP_04583106.1| tyrosyl-tRNA synthetase [Helicobacter winghamensis ATCC BAA-430]
 gi|229376115|gb|EEO26206.1| tyrosyl-tRNA synthetase [Helicobacter winghamensis ATCC BAA-430]
          Length = 404

 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 101/360 (28%), Positives = 170/360 (47%), Gaps = 20/360 (5%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   L  L   QK G K   L+G  T +IGDPS + E+R+ +  +++ 
Sbjct: 46  GFDPTAPDLHLGHTVLLQKLATFQKYGAKVFFLIGDFTGMIGDPSGKSETRKPLSKEQVL 105

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           +N +     +   +      +   ++ N  WL S+    ++ E+ + FSV RML  +   
Sbjct: 106 QNAK----TYEEQVYKVLDASKMEIVFNSNWLDSLGTRGMI-ELAAKFSVARMLERDDFE 160

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R K +  +S +EF Y +LQ YD V L    +C ++ GG+DQ  N++ G  L       K
Sbjct: 161 KRFKAQSPISIVEFFYPLLQGYDSVAL----NCDIEFGGTDQKFNLLMGRHLQRAYGLEK 216

Query: 221 LFALT-SPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
             ++   PLL    G  KM K+L   + + +E   P   +    +I D+ +  + + L+T
Sbjct: 217 EQSVVMVPLLEGLDGVNKMSKSLGNYVGITQE---PKEMFGRILSISDSLMWRYYELLST 273

Query: 279 LPMSEIDRMAKLQGKEINEA-KKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMP 337
             + EI  +   QG E  E   K++   +   +  R     AA AA E F        +P
Sbjct: 274 KSLQEIAELK--QGVEKGELHPKVVKENLALEIIARYYDINAANAAKEEFARVFSKDELP 331

Query: 338 T-ISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
           + I +   E  +G+ +  L  + G   S +EA R +K  A+K+N   + + KL ++  ++
Sbjct: 332 SDIPVFTKE--KGIWIAQLAQECGLCDSNSEALRAIKQGALKLNGKKVEDSKLNLQESEY 389


>gi|163848622|ref|YP_001636666.1| tyrosyl-tRNA synthetase [Chloroflexus aurantiacus J-10-fl]
 gi|222526556|ref|YP_002571027.1| tyrosyl-tRNA synthetase [Chloroflexus sp. Y-400-fl]
 gi|163669911|gb|ABY36277.1| tyrosyl-tRNA synthetase [Chloroflexus aurantiacus J-10-fl]
 gi|222450435|gb|ACM54701.1| tyrosyl-tRNA synthetase [Chloroflexus sp. Y-400-fl]
          Length = 390

 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 97/376 (25%), Positives = 176/376 (46%), Gaps = 27/376 (7%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D T   +H GH   L  L   Q+ GH+ + ++G  T+ IGDPS RDE+R  + + E++
Sbjct: 35  GFDPTKPDMHIGHAVGLRKLRAFQELGHQVVLIVGDWTAQIGDPSGRDETRTRLSAAEVR 94

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
            N E        F +    +   +   +E W         L ++   F++ +ML+ E+ R
Sbjct: 95  ANAET---YMEQFFRVVDRQRTEVRWQSE-WFGQFTLEHAL-DLAGRFTLAQMLAHETFR 149

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TP 219
            R +    L+ LE  Y +LQAYD V +  +    ++ GG+DQ  NI+ G +L  +L  TP
Sbjct: 150 KRYETGAPLTILELMYPMLQAYDSVAIKAD----VEFGGTDQKFNILAGRELMAQLGMTP 205

Query: 220 KLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTL 279
           +   L  PL+    G KM KT +  + +      P   +    ++ D  +  + + LT +
Sbjct: 206 QQVFLV-PLIPGTDGRKMSKTFNNTVDIR---MPPSEMYGRIMSMSDEVLPLYFEVLTDV 261

Query: 280 PMSEIDRMA-KLQGKEIN--EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM 336
           P++EID M   +   ++N  + K  +A EI    H    A  A  A +  F      + +
Sbjct: 262 PLAEIDEMKLAMAAGQVNPRDLKMRLAREIVAQFHDPAAAAAAEAAFVRQFVEREIPEDI 321

Query: 337 PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
           PT +++        G++ ++V +G A S +EARR +    ++++   + +  L +     
Sbjct: 322 PTFTLTAPS-----GIVEVLVASGLAPSKSEARRLIDGGGVRVDGERVEDYALTLS---- 372

Query: 397 DSTGNIKLSFGKKNHI 412
               N+ +  G++  +
Sbjct: 373 -PGANVVVQVGRRKFV 387


>gi|297182357|gb|ADI18524.1| tyrosyl-tRNA synthetase [uncultured gamma proteobacterium
           HF4000_19M20]
          Length = 398

 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 113/395 (28%), Positives = 183/395 (46%), Gaps = 44/395 (11%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           I+ E+ F  ++   + L I          +G+D TA  LH GH   L  L   Q  GH+ 
Sbjct: 16  IVPEKEFHEKLKKEKPLRI---------KLGFDPTAPDLHLGHSVILNKLKLFQDFGHEV 66

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           I L+G  T ++GDPS  +E+R ++  +EI+ N    K       K    K   +  N+E 
Sbjct: 67  IFLIGDFTGLVGDPSGVNETRPVLSEEEIKIN---AKTYERQVFKILDRKKTEVRFNSE- 122

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           W+ +    + +R + S  +V RML  +    R K +Q +S  EF Y +LQ YD   L  +
Sbjct: 123 WMKNFTPQEFVR-LSSIQTVARMLERDDFDKRYKSQQPISIHEFLYPLLQGYDSFVLKAD 181

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWL-- 247
               +++GG+DQ  N++ G ++ +    P    +T PLL    G  KM ++L   I L  
Sbjct: 182 ----VELGGTDQKFNLLLGREVQKFYGLPPQSIMTLPLLEGVDGVMKMSQSLGNYIALED 237

Query: 248 -NKEM------TSPYNFWQYWRNIDDADVVSFA--KRLTTLPMSEIDRMAKLQGKEINEA 298
            +K+M       S    W+Y+      D++SF   K + +L      + A+ +G+     
Sbjct: 238 SSKDMFGKIMSISDKLMWRYY------DLLSFKTEKEIKSL------KKAQKEGENPRNL 285

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVK 358
           K ++A EI    HG  E  KA       F       ++  ISI+ +     + L  ++ +
Sbjct: 286 KFLLAEEIVDRFHGEGEGSKAKKEFTSVFQQGKLPSNIKEISINIE--GSTLTLPKVLKE 343

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL 393
           AG A ST+EA R +K  A+KI    I++ K  + L
Sbjct: 344 AGMAISTSEALRLIKQGAVKIEGQKITDPKHNLSL 378


>gi|15595865|ref|NP_249359.1| tyrosyl-tRNA synthetase [Pseudomonas aeruginosa PAO1]
 gi|116054393|ref|YP_788838.1| tyrosyl-tRNA synthetase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|296387162|ref|ZP_06876661.1| tyrosyl-tRNA synthetase [Pseudomonas aeruginosa PAb1]
 gi|81541822|sp|Q9I5Q3|SYY2_PSEAE RecName: Full=Tyrosyl-tRNA synthetase 2; AltName:
           Full=Tyrosine--tRNA ligase 2; Short=TyrRS 2
 gi|9946546|gb|AAG04057.1|AE004501_9 tyrosyl-tRNA synthetase 2 [Pseudomonas aeruginosa PAO1]
 gi|115589614|gb|ABJ15629.1| tyrosyl-tRNA synthetase 2 [Pseudomonas aeruginosa UCBPP-PA14]
          Length = 399

 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 98/347 (28%), Positives = 158/347 (45%), Gaps = 18/347 (5%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   +  L   Q  GH+ I L+G  T +IGDPS +  +R  +  +++ 
Sbjct: 39  GFDPTAPDLHLGHTVLINKLRQFQDLGHQVIFLIGDFTGMIGDPSGKSVTRPPLTREQVL 98

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           EN E  K     F      KT+     N TW+  +   D +R + S ++V RML  +   
Sbjct: 99  ENAETYKS--QVFKILDPAKTEVAF--NSTWMDQLTPADFIR-LASQYTVARMLERDDFS 153

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R    Q ++  EF Y ++Q YD V L  +    +++GG+DQ  N++ G +L        
Sbjct: 154 KRYASNQPIAIHEFLYPLVQGYDSVALKAD----VELGGTDQKFNLLMGRELQRAYGQEA 209

Query: 221 LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTL 279
              LT PLL    G  KM K+L   I + +   +P   +    +I D  +  + + L+  
Sbjct: 210 QVILTMPLLEGLDGVKKMSKSLGNYIGIQE---APGVMYSKLVSIPDTLMWRYFELLSFR 266

Query: 280 PMSEIDRMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMP 337
            + EID   K    G    + K  +A EI    HG E A  A  +A          + +P
Sbjct: 267 SLDEIDSFRKDVEAGANPRDIKIKLAEEIVARFHGEEAAASAHKSAGNRLKEGELPEDLP 326

Query: 338 TISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSII 384
            I +S  E    M + +++ KAG   +   AR  L + ++K++  ++
Sbjct: 327 EIELSSPE---DMPVASVLNKAGLVKNAAAARDLLGAGSVKVDGQVV 370


>gi|309791774|ref|ZP_07686262.1| tyrosyl-tRNA synthetase [Oscillochloris trichoides DG6]
 gi|308226180|gb|EFO79920.1| tyrosyl-tRNA synthetase [Oscillochloris trichoides DG6]
          Length = 395

 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 96/375 (25%), Positives = 170/375 (45%), Gaps = 25/375 (6%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D T   +H GH   L  L   Q  GH+ + ++G  T+ IGDPS RDE+R  + +  ++
Sbjct: 40  GFDPTKPDMHIGHAVGLRKLRKFQDAGHQVVLIVGDWTAQIGDPSGRDETRPRLDAATVR 99

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
            N E        F +    +   +   +E W    K    L ++   F++ +MLS E+ R
Sbjct: 100 SNAET---YMEQFFRVVDRERTEVRWQSE-WYGDFKLEQAL-DLAGRFTLGQMLSHETFR 154

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R +    L+ LE  Y +LQAYD V +  +    ++ GG+DQ  N + G +L  +L    
Sbjct: 155 RRYEEGAKLTILELMYPMLQAYDSVAIQSD----VEFGGTDQKFNNLAGRELMSQLGMRP 210

Query: 221 LFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLP 280
              L  PL+    G KMGKT +  + +      P        ++ D  +  + + LT +P
Sbjct: 211 QHVLLVPLIPGTDGRKMGKTFNNTVDIT---LPPAEMLGKIMSMSDEVLPLYFEVLTDVP 267

Query: 281 MSEIDRM-AKLQGKEIN--EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMP 337
           ++E+  + A ++   +N  + K  +A E+ +  H    +   A AA E F      + +P
Sbjct: 268 LAELAAIRAAMEAGTVNPRDLKMRLAREVVSQFH----SPADALAAEEAFVRQFVQRELP 323

Query: 338 TISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
           T  I +  +S    ++ L+V A  A S  EARR +    ++++   +    L +     D
Sbjct: 324 T-DIPEYALSGPTAIIDLMVAAKLAASKGEARRLIDGGGVRVDGERVEGYDLSL-----D 377

Query: 398 STGNIKLSFGKKNHI 412
               + +  G++  +
Sbjct: 378 PGAGVVVQVGRRKFV 392


>gi|315452765|ref|YP_004073035.1| tyrosyl-tRNA synthetase [Helicobacter felis ATCC 49179]
 gi|315131817|emb|CBY82445.1| tyrosyl-tRNA synthetase [Helicobacter felis ATCC 49179]
          Length = 400

 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 108/388 (27%), Positives = 175/388 (45%), Gaps = 42/388 (10%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   L  L  LQK G     L+G  T+ IGDPS + E+R+ +  + +Q
Sbjct: 42  GFDPTAPDLHLGHAVLLEKLATLQKHGGFVKFLIGDFTARIGDPSGKSETRKPLSEEAVQ 101

Query: 101 ENIEKI-KGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           EN +   K +F       T      +  N TWL  +    +L  + S FSV RML  +  
Sbjct: 102 ENAKTYAKQVFRVLDPALTE-----VCFNSTWLNPLGTSGIL-ALTSKFSVARMLERDDF 155

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R +  Q +S +EF Y +LQ YD V L    +C L++GG+DQ  N++ G  L       
Sbjct: 156 EKRYRNHQPISIVEFLYPLLQGYDSVVL----ECDLELGGNDQKFNLMVGRFLQRAYGLD 211

Query: 220 K-LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYN---------FWQYWRNIDDAD 268
           K    LT PLL    G  KM K+L   I + +E  S Y           W+Y+      +
Sbjct: 212 KEQSVLTMPLLEGLDGVHKMSKSLGNYIGITEEPASMYAKLLSISDDLMWRYY------E 265

Query: 269 VVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFD 328
           ++S         + E  R  +   K + E    +A EIT   H  E+A+ A       FD
Sbjct: 266 LLSAKTSDQIANLQEAVRAHRAHPKAVKEE---LALEITARWHSEEQAQSAKAE----FD 318

Query: 329 MSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEK 388
                +  P+  + +     G  + +++ +     S+++ARR +    +++N+ ++ +++
Sbjct: 319 KVFRHKQTPS-QMPEWHFENGAWIASVLKECQLCPSSSQARRDILGGGVRLNHEVMKDDQ 377

Query: 389 LQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            Q       S G+  +  GK+   + H+
Sbjct: 378 YQF------SKGSYIVQVGKRKFALVHI 399


>gi|285808325|gb|ADC35855.1| putative tyrosyl-tRNA synthetase [uncultured bacterium 92]
          Length = 404

 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 102/369 (27%), Positives = 177/369 (47%), Gaps = 27/369 (7%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G+D TA  LH GH   +  +   Q  GH+ + ++G  T++IGDPS R ++R  +   EI
Sbjct: 41  VGFDPTAPDLHLGHTVLIRKMKHFQDLGHRVVFVVGDFTAMIGDPSGRSKTRPPLTPDEI 100

Query: 100 QENIEKIKG-IFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
             N E  K  +F    +  T     ++  N  WL  +    L+R + + ++V +ML    
Sbjct: 101 DRNAETYKAQVFKILDREKT-----VVEFNSRWLSPLGASGLIR-LAARYNVAQMLERRE 154

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
            R R    Q ++  EF Y + QAYD V L    +  +++GG+DQ  N+  G D+      
Sbjct: 155 FRQRFDAGQPIAVHEFLYPLAQAYDSVAL----EADVELGGTDQLFNLNVGRDIMPSYGL 210

Query: 219 PKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT 277
                +T+PLL    G  KM K+L   + + +   S    +    +I D  +  + + LT
Sbjct: 211 EPQIVMTTPLLEGLDGVEKMSKSLGNYVGVTESADS---MFGKLMSISDTLMWRYYQLLT 267

Query: 278 TLPMSEIDRM-AKLQGKEIN--EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQ 334
            L   EID + AK+   +++  +AK  +A  I    H   +A++AA    E F+  +H++
Sbjct: 268 DLGGPEIDTLQAKVTSGDVHPKQAKVDLARRIVADYHSTTDADRAA----EEFE-RVHAR 322

Query: 335 -HMPTISISKD---EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQ 390
             +P+   S     E      L  L+V AG A ST+EA R ++   +++  + I++ + +
Sbjct: 323 GELPSDLRSVAVVFEPDPSKALTRLMVDAGLAASTSEAGRKIQQGGVRLAGTRIADARHR 382

Query: 391 IKLQDFDST 399
           ++  D  S 
Sbjct: 383 VQPSDLPSV 391


>gi|107099634|ref|ZP_01363552.1| hypothetical protein PaerPA_01000650 [Pseudomonas aeruginosa PACS2]
          Length = 399

 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 98/347 (28%), Positives = 158/347 (45%), Gaps = 18/347 (5%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   +  L   Q  GH+ I L+G  T +IGDPS +  +R  +  +++ 
Sbjct: 39  GFDPTAPDLHLGHTVLINKLRQFQDLGHQVIFLIGDFTGMIGDPSGKSVTRPPLTREQVL 98

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           EN E  K     F      KT+     N TW+  +   D +R + S ++V RML  +   
Sbjct: 99  ENAETYKS--QVFKILDPAKTEVAF--NSTWMDQLTPADFIR-LASQYTVARMLERDDFS 153

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R    Q ++  EF Y ++Q YD V L  +    +++GG+DQ  N++ G +L        
Sbjct: 154 KRYASNQPIAIHEFLYPLVQGYDSVALKAD----VELGGTDQKFNLLMGRELQRAYGQEA 209

Query: 221 LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTL 279
              LT PLL    G  KM K+L   I + +   +P   +    +I D  +  + + L+  
Sbjct: 210 QVILTMPLLEGLDGVKKMSKSLGNYIGIQE---APGVMYSKLVSIPDTLMWRYFELLSFR 266

Query: 280 PMSEIDRMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMP 337
            + EID   K    G    + K  +A EI    HG E A  A  +A          + +P
Sbjct: 267 SLDEIDSFRKDVEAGANPRDIKIKLAEEIVARFHGEEAAASAHKSAGNRLKEGELPEDLP 326

Query: 338 TISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSII 384
            I +S  E    M + +++ KAG   +   AR  L + ++K++  ++
Sbjct: 327 EIELSSPE---DMPVASVLNKAGLVKNAAAARDLLGAGSVKVDGQVV 370


>gi|296114084|ref|YP_003628022.1| tyrosyl-tRNA synthetase [Moraxella catarrhalis RH4]
 gi|295921778|gb|ADG62129.1| tyrosyl-tRNA synthetase [Moraxella catarrhalis RH4]
 gi|326560668|gb|EGE11036.1| tyrosyl-tRNA synthetase [Moraxella catarrhalis 46P47B1]
 gi|326562349|gb|EGE12675.1| tyrosyl-tRNA synthetase [Moraxella catarrhalis 103P14B1]
 gi|326563125|gb|EGE13398.1| tyrosyl-tRNA synthetase [Moraxella catarrhalis 12P80B1]
 gi|326567854|gb|EGE17956.1| tyrosyl-tRNA synthetase [Moraxella catarrhalis BC7]
 gi|326569065|gb|EGE19134.1| tyrosyl-tRNA synthetase [Moraxella catarrhalis BC1]
 gi|326571757|gb|EGE21770.1| tyrosyl-tRNA synthetase [Moraxella catarrhalis BC8]
 gi|326573593|gb|EGE23554.1| tyrosyl-tRNA synthetase [Moraxella catarrhalis O35E]
 gi|326574328|gb|EGE24271.1| tyrosyl-tRNA synthetase [Moraxella catarrhalis CO72]
 gi|326575552|gb|EGE25477.1| tyrosyl-tRNA synthetase [Moraxella catarrhalis 101P30B1]
          Length = 406

 Score =  120 bits (301), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 93/350 (26%), Positives = 167/350 (47%), Gaps = 18/350 (5%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA+ LH GH   L  L   Q  GH+ + L+G  T+ IGDPS R+ +R  +   E+
Sbjct: 41  LGMDPTAADLHLGHTVVLNKLRHFQDLGHEVLFLIGDYTARIGDPSGRNATRPPLTEAEV 100

Query: 100 QENIEK-IKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
           + N +   K +F    K  T      ++ N  W   +   D++ ++ S  +V+RML  + 
Sbjct: 101 KANAQTYAKQVFKILDKDKTK-----IVFNSDWFGKMSAGDMI-QLASQITVSRMLERDD 154

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
              R   +  ++  EF Y ++Q YD + L    D  +++GG+DQ  N++ G  L  R   
Sbjct: 155 FSKRYNSQTPIAIHEFLYPLVQGYDSIAL----DADVELGGTDQTFNLLMGRTLQGRYDK 210

Query: 219 PKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT 277
                +T P+L    G  KM K+L   I +N      Y   Q   ++ D  +  + + L+
Sbjct: 211 EPQVCITMPILEGLDGVQKMSKSLGNYIGINDPAGVMY---QKILSMPDTLIARYFELLS 267

Query: 278 TLPMSEIDRMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQH 335
             PMSE++ +      G+   E K+I+A E+    H +E A+ A  +A            
Sbjct: 268 FKPMSEVNALLDDMKNGRNPQEIKRILALELIERFHDKESADNAHKSAGNRLADGELPVD 327

Query: 336 MPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIIS 385
           +P +S+S +   + + +  ++ +AG A ++ +A+  L   A+K++  ++ 
Sbjct: 328 LPEVSLSLNGQDK-LFITQVLNQAGLAKNSAQAKDMLSRGAVKVDGQVVD 376


>gi|154250390|ref|YP_001411215.1| tyrosyl-tRNA synthetase [Fervidobacterium nodosum Rt17-B1]
 gi|154154326|gb|ABS61558.1| tyrosyl-tRNA synthetase [Fervidobacterium nodosum Rt17-B1]
          Length = 398

 Score =  120 bits (301), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 100/362 (27%), Positives = 168/362 (46%), Gaps = 29/362 (8%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D +   LH GH   L  L   Q  GH+ I ++G  T++IGDPS R+ +R M+  +E+
Sbjct: 39  LGVDPSRPDLHLGHAVVLKKLKQFQDLGHQVILIIGDFTAMIGDPSGRNTTRPMLSREEV 98

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
            EN +       +F+     KT  +  NNE WL ++ + D+++  G  ++V RML  E  
Sbjct: 99  VENAKSYAE--QAFMILDKEKT-IIRYNNE-WLGAMTFADVVKLAGK-YTVARMLEREDF 153

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R      +S  EF Y + QAYD V +  +    +++GG+DQ  N++ G  + E     
Sbjct: 154 AKRYAEGTPISVAEFLYPLAQAYDSVAIQAD----VELGGTDQLFNLMVGRKIQEEYGLR 209

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               +T P++    G  KM K+ +  I    E   P + +    +I D  +V +AK LT 
Sbjct: 210 PQIVMTMPIIEGTDGKLKMSKSYNNYIGFTDE---PRDMYGKVMSIPDELIVKYAKLLTD 266

Query: 279 LPMSEIDRMAKLQGKEINEA-------KKIIATEITTMVHGREEAEKAATAAMECFDMSI 331
           +     D + +   KEINE        K  +A EI    HG E+A+ A    +  F    
Sbjct: 267 VD----DEVLRKMEKEINEKAVNPRDYKMWLAKEIVRQFHGEEKAKDAEEYFITVFQRKE 322

Query: 332 HSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
             + MP + I       G+  +  +++     S +E +R +    +  +N+ I N K  +
Sbjct: 323 IPEEMPEVKIQA-----GVYNIVDLLETLKIGSRSEIKRLITQGGVYFDNNRIDNFKANV 377

Query: 392 KL 393
           ++
Sbjct: 378 EI 379


>gi|193212254|ref|YP_001998207.1| tyrosyl-tRNA synthetase [Chlorobaculum parvum NCIB 8327]
 gi|193085731|gb|ACF11007.1| tyrosyl-tRNA synthetase [Chlorobaculum parvum NCIB 8327]
          Length = 402

 Score =  120 bits (301), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 98/357 (27%), Positives = 169/357 (47%), Gaps = 21/357 (5%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D +   LH GH   L  L   Q  GH+ I ++G  T++IGDPS + ++R  + ++E 
Sbjct: 44  LGADPSRPDLHLGHSVVLRKLREFQDLGHEAILIIGDFTAMIGDPSGKSKTRPQLTAEEA 103

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           +EN    K  F    K    +   +  N + WL  + + D++R + S ++V RML  +  
Sbjct: 104 REN---GKSYFEQASKILDPEKTTICYNAD-WLGKMSFADVIR-LSSHYTVARMLERDDF 158

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R K +  +S  EF Y + Q  D V L  +    +++GG+DQ  N++ G DL       
Sbjct: 159 EKRYKAQAPISIHEFLYPLAQGMDSVHLQND----VELGGTDQKFNLLVGRDLQREYGID 214

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               +T PLL    G  KM K+L  AI  N    +P + +    +I D  + ++   L  
Sbjct: 215 PQVCITMPLLVGTDGVEKMSKSLGNAICFND---TPEDMYGRTLSIPDPLIETYWNLLLP 271

Query: 279 LPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPT 338
                   +A+    +  E K+ +A E+    +  +EA K    A E FD  I ++  P+
Sbjct: 272 HHSGNDTPVAERVAADPRETKRELAREVVAQYYSTDEAAK----AQEHFDRVIVNKQAPS 327

Query: 339 --ISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL 393
              +I  +E S  M ++ ++++     S NEARR ++  A++ +   I++    I+L
Sbjct: 328 DLPTIEFEETS--MPIVEMLMQLKAFPSKNEARRMIQQGAVQADEQKITDINAVIEL 382


>gi|218889391|ref|YP_002438255.1| tyrosyl-tRNA synthetase [Pseudomonas aeruginosa LESB58]
 gi|218769614|emb|CAW25374.1| tyrosyl-tRNA synthetase 2 [Pseudomonas aeruginosa LESB58]
          Length = 399

 Score =  120 bits (301), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 98/347 (28%), Positives = 158/347 (45%), Gaps = 18/347 (5%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   +  L   Q  GH+ I L+G  T +IGDPS +  +R  +  +++ 
Sbjct: 39  GFDPTAPDLHLGHTVLINKLRQFQDLGHQVIFLIGDFTGMIGDPSGKSVTRPPLTREQVL 98

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           EN E  K     F      KT+     N TW+  +   D +R + S ++V RML  +   
Sbjct: 99  ENAETYKS--QVFKILDPAKTEVAF--NSTWMDQLTPADFIR-LASQYTVARMLERDDFS 153

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R    Q ++  EF Y ++Q YD V L  +    +++GG+DQ  N++ G +L        
Sbjct: 154 KRYASNQPIAIHEFLYPLVQGYDSVALKAD----VELGGTDQKFNLLMGRELQRAYGQEA 209

Query: 221 LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTL 279
              LT PLL    G  KM K+L   I + +   +P   +    +I D  +  + + L+  
Sbjct: 210 QVILTMPLLEGLDGVKKMSKSLGNYIGIQE---APGVMYSKLVSIPDTLMWRYFELLSFR 266

Query: 280 PMSEIDRMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMP 337
            + EID   K    G    + K  +A EI    HG E A  A  +A          + +P
Sbjct: 267 SLDEIDSFRKDVEAGANPRDIKIKLAEEIVARFHGEEAAASAHKSAGNRLKDGELPEDLP 326

Query: 338 TISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSII 384
            I +S  E    M + +++ KAG   +   AR  L + ++K++  ++
Sbjct: 327 EIELSSPE---DMPVASVLNKAGLVKNAAAARDLLGAGSVKVDGQVV 370


>gi|193216002|ref|YP_001997201.1| tyrosyl-tRNA synthetase [Chloroherpeton thalassium ATCC 35110]
 gi|193089479|gb|ACF14754.1| tyrosyl-tRNA synthetase [Chloroherpeton thalassium ATCC 35110]
          Length = 402

 Score =  120 bits (301), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 104/366 (28%), Positives = 174/366 (47%), Gaps = 23/366 (6%)

Query: 30  LCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDE 89
           L +Q  +   +G D +   LH GH   L  L   Q  GH  I L+G  T+ IGDPS + +
Sbjct: 34  LKTQTPLKVKLGADPSRPDLHIGHAVVLKKLRDFQDLGHTAILLIGDFTAQIGDPSGKSK 93

Query: 90  SRRMMRSQEIQENIEKIKGIFSSFIK-YGTGKTDALMLNNETWLCSIKYIDLLREIGSFF 148
           +R  +  +E + N +     F    K   T KT  ++ +N  WL ++ + D++R + S +
Sbjct: 94  TRPQLTHEETRINGQ---SYFEQAAKILDTEKT--IITHNADWLGTMTFADVIR-LTSHY 147

Query: 149 SVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIIC 208
           +V RML  +    R K+ + ++  EF Y + QA D V L  +    +++GG+DQ  N++ 
Sbjct: 148 TVARMLERDDFEKRYKQGEPIAIHEFLYPLAQAMDSVHLQND----VELGGTDQKFNLLV 203

Query: 209 GIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDA 267
           G DL           +T P+L    G  KM K+L  AI       SP + +    +I D 
Sbjct: 204 GRDLQREYGQAPQVCITLPILEGTDGVQKMSKSLGNAISFTD---SPADMFGRVLSIPDI 260

Query: 268 DVVSFAKRLTTLPMSEIDRMAKLQGKE-INEAKKIIATEITTMVHGREEAEKAATAAMEC 326
            + ++ K  T     +++  A L+ KE   +AK+ +A EI  + H   +A+K    A + 
Sbjct: 261 LIENYFKLATRFSDEKLEE-ALLEAKENPRDAKRRLAREIVAIYHSETDAQK----AQDD 315

Query: 327 FDMSIHSQHMPTISISKDEVSRGM-GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIIS 385
           FD     +  P+  +++  +  G   L+  +V  G   S  EARR +    + I+N  I 
Sbjct: 316 FDRIFIRKEAPS-DVTEVHLEAGAHSLIDALVIIGATASKGEARRLMTQGGVSIDNEKIE 374

Query: 386 NEKLQI 391
           + K Q+
Sbjct: 375 DAKYQL 380


>gi|313901940|ref|ZP_07835357.1| tyrosyl-tRNA synthetase [Thermaerobacter subterraneus DSM 13965]
 gi|313467786|gb|EFR63283.1| tyrosyl-tRNA synthetase [Thermaerobacter subterraneus DSM 13965]
          Length = 435

 Score =  120 bits (301), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 97/383 (25%), Positives = 175/383 (45%), Gaps = 25/383 (6%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  LH GH   L  L   Q  GH+ + ++G  T  IGDP+ +  +R  +  +++
Sbjct: 72  LGLDPTAPDLHIGHTVVLRKLRQFQDLGHQVVLIIGDFTGRIGDPTGKSVTRPQLTEEQV 131

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           + N           +     +T+  +  N  WL  + + D++R + + ++V RML  +  
Sbjct: 132 RANARTYAEQLGRILD--MERTE--LTFNARWLGPMTFADVIR-LAARYTVARMLERDDF 186

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R +  + ++  EF Y + QAYD V +  +    +++GG+DQ  N++ G ++       
Sbjct: 187 AQRYREGRPIAIHEFLYPLAQAYDSVAVRAD----VELGGTDQKFNLLVGREIQREYGQE 242

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
              AL  PLL    G  KM K+L   I +      P   +    +I D  +V +    T 
Sbjct: 243 AQVALLMPLLEGTDGKDKMSKSLGNYIAIAD---PPGEMFGKTMSIPDELIVKYMVLATD 299

Query: 279 LPMSEIDRMAK-LQGKEIN--EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQH 335
           L M EI R+ + +   ++N  +AK  +A  +  M HGR  A+ A    +  F        
Sbjct: 300 LDMGEIRRLEQGMASGQVNPRDAKLRLAHALVRMYHGRAAADAAQEEFLRVFSRHELPAE 359

Query: 336 MPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           MP + +    +      + L+  AG A+S +EARR ++  A++++   +++ + ++   D
Sbjct: 360 MPEVVLPAPRLD----AVRLLRAAGMASSNSEARRLIEQGAVRLDGQRVASPQDELAPAD 415

Query: 396 FDSTGNIKLSFGKKNHIICHLCG 418
               G + L  GK+      L G
Sbjct: 416 ----GAV-LQVGKRRFARLRLPG 433


>gi|254459356|ref|ZP_05072777.1| tyrosyl-tRNA synthetase [Campylobacterales bacterium GD 1]
 gi|207083969|gb|EDZ61260.1| tyrosyl-tRNA synthetase [Campylobacterales bacterium GD 1]
          Length = 399

 Score =  120 bits (301), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 111/381 (29%), Positives = 179/381 (46%), Gaps = 34/381 (8%)

Query: 37  TAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRS 96
           T   G+D TA  LH GH   L  L   QK G +   L+G  T+ IGDP+ +  +R+++  
Sbjct: 37  TVKAGFDPTAPDLHLGHTVLLQKLATFQKYGARVQFLIGNFTATIGDPTGKSATRKVLSQ 96

Query: 97  QEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSF 156
           ++I++NI  +     +F      KT+  ++ N+ WL  +    +L E+ S  +V RML  
Sbjct: 97  EDIEKNI--VSYTTQAFKILDESKTE--IVYNKDWLEPLGAAGML-ELASTLTVARMLER 151

Query: 157 ESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL 216
           +    R      ++  EF Y +LQ YD V L  +    +++GG+DQ  N++ G  L +  
Sbjct: 152 DDFSKRFTSNTPIAVSEFMYPLLQGYDSVHLKSD----VEIGGTDQKFNLLMGRQLQKTY 207

Query: 217 KTPKLFA-LTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAK 274
              K  A L  P+L    G  KM K+L+  I +  E   P + +    +I D  +  F +
Sbjct: 208 DVKKQQAVLMMPILEGLDGVQKMSKSLNNYIGVTDE---PNDMFGKVLSISDDLMWRFYE 264

Query: 275 RLTTLPMSEIDRM------AKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFD 328
            L+T  + EI  +        L  K++ E    +A EIT   H  E A+ A     E F+
Sbjct: 265 LLSTKSLEEIATIKSGVEDGSLHPKKVKEN---LAIEITARFHNDELAQNAK----EEFE 317

Query: 329 MSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEK 388
             +H++      I +      + +   +V      ST++ARR +K  A+KIN   IS+ +
Sbjct: 318 -KVHAKSQIPTEIEEFSCDGEIWIAQALVDCNIEPSTSQARRDIKQGAVKINQEKISDIQ 376

Query: 389 LQIKLQDFDSTGNIKLSFGKK 409
           LQ+      STG   L  GK+
Sbjct: 377 LQL------STGEYILQVGKR 391


>gi|300871541|ref|YP_003786414.1| tyrosyl-tRNA synthetase [Brachyspira pilosicoli 95/1000]
 gi|300689242|gb|ADK31913.1| tyrosyl-tRNA synthetase [Brachyspira pilosicoli 95/1000]
          Length = 398

 Score =  120 bits (300), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 107/384 (27%), Positives = 179/384 (46%), Gaps = 27/384 (7%)

Query: 30  LCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDE 89
           L S   +T   G+D TA  +H GH   L  +   Q  GHK I L+G  T  IGDPS + +
Sbjct: 32  LKSGKKLTVKAGFDPTAPDIHLGHTVLLRKMRHFQLLGHKVIFLIGDFTGRIGDPSGKTK 91

Query: 90  SRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFS 149
           +R  +  +++  N E  K     F      KT  ++  N  WL  + + D+L  + S ++
Sbjct: 92  TRPRLSEEDVLRNAETYKQ--QVFKILDPEKT--IVEFNSKWLGKMSFADVLG-LTSRYT 146

Query: 150 VNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICG 209
           V +M+  +    R K  Q +S +EF Y + Q YD V L    +C +++GG+DQ  N++ G
Sbjct: 147 VAQMIERDDFSKRYKNGQPISIMEFLYPLAQGYDSVSL----ECDVELGGNDQKFNLLVG 202

Query: 210 IDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDAD 268
             L +         LT PLL    G  KM K+L   I +     SP + +    +I D  
Sbjct: 203 RTLMKEYGLSPQAVLTVPLLEGLDGVEKMSKSLGNYIGV---YDSPKDMYGKAMSIPDGL 259

Query: 269 VVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIATEITTMVHGREEAEKAATAAMEC 326
           ++ + + +T +PM++I    K   +G+     K I+A EI  + H  ++A  A       
Sbjct: 260 ILKYMELVTDIPMNDIRNYKKAMEEGENPRNIKSILAKEIVKLYHTEDDANNAEEEFKRI 319

Query: 327 FDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISN 386
           F        +  I + KD+    + +L++ +K       NE++ +LK   I   +  + N
Sbjct: 320 FSSKGVPDEIEEIVVGKDD--NILNILSVCMK-------NESKSNLK-RLISQGSVTLDN 369

Query: 387 EKLQIKLQDFDSTGNIKLSFGKKN 410
           EK+     + +  G +K+  GK+N
Sbjct: 370 EKITDINSNINKEGILKV--GKRN 391


>gi|269215911|ref|ZP_06159765.1| tyrosine--tRNA ligase [Slackia exigua ATCC 700122]
 gi|269130170|gb|EEZ61248.1| tyrosine--tRNA ligase [Slackia exigua ATCC 700122]
          Length = 405

 Score =  120 bits (300), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 104/355 (29%), Positives = 171/355 (48%), Gaps = 25/355 (7%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  L   Q  GH+   ++G GT++IGDPS R+ +R  +  ++I
Sbjct: 40  LGVDPTAPDIHLGHAVPLRKLRQFQDLGHRVTLIIGDGTALIGDPSGRNATRPQLSPEKI 99

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
            EN      +  +F      +T AL  N+E W+ S++  DLL+ + S F+V R+L  +  
Sbjct: 100 AENARTY--VDQAFKILDPDRT-ALRYNSE-WILSLEMADLLKLL-SNFTVARILERDDF 154

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R    + ++  EF Y ++QAYD V +  +    +++GGSDQ  N++ G +L E++   
Sbjct: 155 HKRYTEGRPIALHEFMYPVMQAYDSVVIGAD----VEIGGSDQLFNLLAGRELMEKMGME 210

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
              ALT PLL    G  KM K+    I L  E   P + +    +I D  +V + +  +T
Sbjct: 211 PQVALTLPLLEGTDGVQKMSKSYGNYIGLTDE---PNDMFGKVMSIPDELMVKYYQLAST 267

Query: 279 LPMSEIDRMAK-LQGKEI--NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIH--- 332
             +  ID + + L   E+  N  K+ +   I           +AA AA   FD+      
Sbjct: 268 EDVDAIDGIERGLAAGELHPNAVKRALGRNIVAAY----YDAEAARAAEADFDLKFKKHG 323

Query: 333 -SQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIIS 385
             +  P + +S +    G +    L+V+A  A S +EARR +    +KI    ++
Sbjct: 324 FPEDAPVVEVSLEPNEEGTVYFAKLLVEAKAAGSVSEARRLIDGGGVKIGGVALA 378


>gi|170078217|ref|YP_001734855.1| tyrosyl-tRNA synthetase [Synechococcus sp. PCC 7002]
 gi|169885886|gb|ACA99599.1| tyrosyl-tRNA synthetase [Synechococcus sp. PCC 7002]
          Length = 391

 Score =  120 bits (300), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 95/358 (26%), Positives = 165/358 (46%), Gaps = 38/358 (10%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D T S LH GH      L   Q  GH  + ++G  T+ IGDP+ + E R+ + + ++
Sbjct: 39  LGVDPTGSDLHLGHSIPFRKLRAFQDAGHTAVVIIGDFTAQIGDPTGKSEVRKQLSAADV 98

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDL--LREIGSFFSVNRMLSFE 157
           Q+N E         + + T     +  N+E WL   K +DL  ++ + +  +V +ML+ E
Sbjct: 99  QQNAETYLEQLRPILDFETPGRLEIRYNSE-WL---KDLDLAKIQALLATMTVQQMLAKE 154

Query: 158 SVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK 217
               R + E  +   EF Y ++Q YD V +    D  +++GG+DQ  NI  G DL     
Sbjct: 155 GFAKRYQSENPIYIHEFLYPLMQGYDSVAV----DADVELGGTDQKFNIAVGRDLQRHFG 210

Query: 218 TPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRL 276
               F L  P+L    G  KM K+L+  + L       +  +Q  +N  D+ +  + + L
Sbjct: 211 KKPQFGLLLPILIGTDGKEKMSKSLNNYVGLKDNH---HTMYQKLQNTPDSLLKDYFELL 267

Query: 277 T-----TLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSI 331
           T     TLP +  D+            +K++A +I T  HG E A  A  A  +     +
Sbjct: 268 TKQDLQTLPTNPRDQ------------QKLLARDIVTQFHGAEAAVDAEKAVQD-----V 310

Query: 332 HSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKL 389
            + ++P  S+   E      L  ++  +G  +S  + RR +K  A+++++  I++  L
Sbjct: 311 AAANIPEFSLGAVEFPS--PLFYILGASGLCSSGGDGRRQIKGGAVRLDDERITDMNL 366


>gi|153956124|ref|YP_001396889.1| tyrosyl-tRNA synthetase [Clostridium kluyveri DSM 555]
 gi|146348982|gb|EDK35518.1| TyrS2 [Clostridium kluyveri DSM 555]
          Length = 402

 Score =  120 bits (300), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 99/379 (26%), Positives = 180/379 (47%), Gaps = 30/379 (7%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D +A  +H GH   L  +  +Q  GH+ + ++G  T  IGDPS + + R  +  +++
Sbjct: 42  LGLDPSAPDIHLGHAVVLRKIKQMQDLGHEAVIIIGDFTGKIGDPSGKSKGRNALTDEQV 101

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           +EN    +  F    K    K   +  N+E WL  + + D+LR + +  +V RM+  +  
Sbjct: 102 REN---ARTYFEQIFKVLDKKKTTVRYNSE-WLSKLNFEDVLR-LAATTTVARMMERDDF 156

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
           ++R      +   EF Y ++QAYD +EL    +  +++GG+DQ  NI+ G  L + +   
Sbjct: 157 QNRFTNNIPIGIHEFFYPLMQAYDSIEL----NADIELGGTDQTFNILMGRTLQKTMGQS 212

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
           +  A+  PLL    G  KM K+L   I + +   S    ++    + D  ++ + +  T 
Sbjct: 213 QQVAMFMPLLEGLDGVEKMSKSLENYIGVYE---SAKVMFKKVMEVPDELILKYFELATD 269

Query: 279 LPMSEID--RMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM 336
                I+  R   +QGK   + K  +A  IT++ H  +E  +A     + F        +
Sbjct: 270 EHPDRIEAIRQELVQGKNPRDIKYALAEIITSLYHTEQEVIEAKEYYDKAFIKKAIPDQI 329

Query: 337 PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
           P +++     S  + ++ L+V+ GF  S +E RR ++ N +++N         Q KL+  
Sbjct: 330 PELAVKAQ--SHLVEIIPLLVENGFIKSNSEFRRLVQQNGVQLN---------QHKLKHI 378

Query: 397 DST---GNIKLSFGKKNHI 412
           DS    G++ L  GKK  +
Sbjct: 379 DSILLYGDV-LKIGKKRFV 396


>gi|78355275|ref|YP_386724.1| tyrosyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|115305805|sp|Q316W7|SYY_DESDG RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|78217680|gb|ABB37029.1| tyrosyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 395

 Score =  120 bits (300), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 100/376 (26%), Positives = 170/376 (45%), Gaps = 25/376 (6%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   +  L   Q+ GH  I L+G  T +IGDPS R E+R  +  +++ 
Sbjct: 36  GFDPTAPDLHLGHTVLIHKLRHFQELGHTVIFLIGDFTGMIGDPSGRSETRPPLTREQVL 95

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           +N E  K       K    +   +  N+E W+      D +R + S ++V RML  +   
Sbjct: 96  QNAETYK---KQVFKILDPEKTEVRFNSE-WMDKFGAADFIR-LASRYTVARMLERDDFE 150

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R +   ++S  EF Y ++Q YD V L  +    +++GG+DQ  N++ G  L  +     
Sbjct: 151 KRYRSNMTISIHEFLYPLVQGYDSVALEAD----VELGGTDQKFNLLVGRHLQSQEGQEP 206

Query: 221 LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTL 279
              LT P+L    G  KM K+L   + +++    P + +    ++ D  +  + + +TT 
Sbjct: 207 QCVLTVPILEGLDGVKKMSKSLGNYVGIDE---PPADMFGKLMSVSDELMWRYYELITTK 263

Query: 280 PMSEIDRMA-KLQGKEINE--AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM 336
            + EI  +  ++   E++   AK+ +A  IT   HG ++A +A       F        M
Sbjct: 264 TLDEIAELQRRVASGELHPKTAKEELAEHITAQYHGSDKAAEARQGFNAVFAQGCVPDDM 323

Query: 337 PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
           P  S S  E S     L     +G A S  EA+R +K  A+ ++   + +    +     
Sbjct: 324 PEFSCSCGEDSTPPAFL---ADSGLAGSRGEAKRLIKQGALSLDGEKLDDPNTPL----- 375

Query: 397 DSTGNIKLSFGKKNHI 412
            + G   +  GKK  +
Sbjct: 376 -TAGEYVVRLGKKRFL 390


>gi|218661276|ref|ZP_03517206.1| tyrosyl-tRNA synthetase [Rhizobium etli IE4771]
          Length = 111

 Score =  120 bits (300), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 57/78 (73%), Positives = 63/78 (80%)

Query: 1  MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
          M  FKSDFL  L ERGFIHQIS+ R LD L ++  VTAYIGYD TASSLH GHLTQ+M+L
Sbjct: 1  MSEFKSDFLRTLKERGFIHQISDERGLDDLFAKETVTAYIGYDPTASSLHVGHLTQIMML 60

Query: 61 FWLQKTGHKPISLMGGGT 78
           WLQ TGH+PISLMGGGT
Sbjct: 61 HWLQATGHRPISLMGGGT 78


>gi|219856456|ref|YP_002473578.1| hypothetical protein CKR_3113 [Clostridium kluyveri NBRC 12016]
 gi|219570180|dbj|BAH08164.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 404

 Score =  120 bits (300), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 99/379 (26%), Positives = 180/379 (47%), Gaps = 30/379 (7%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D +A  +H GH   L  +  +Q  GH+ + ++G  T  IGDPS + + R  +  +++
Sbjct: 44  LGLDPSAPDIHLGHAVVLRKIKQMQDLGHEAVIIIGDFTGKIGDPSGKSKGRNALTDEQV 103

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           +EN    +  F    K    K   +  N+E WL  + + D+LR + +  +V RM+  +  
Sbjct: 104 REN---ARTYFEQIFKVLDKKKTTVRYNSE-WLSKLNFEDVLR-LAATTTVARMMERDDF 158

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
           ++R      +   EF Y ++QAYD +EL    +  +++GG+DQ  NI+ G  L + +   
Sbjct: 159 QNRFTNNIPIGIHEFFYPLMQAYDSIEL----NADIELGGTDQTFNILMGRTLQKTMGQS 214

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
           +  A+  PLL    G  KM K+L   I + +   S    ++    + D  ++ + +  T 
Sbjct: 215 QQVAMFMPLLEGLDGVEKMSKSLENYIGVYE---SAKVMFKKVMEVPDELILKYFELATD 271

Query: 279 LPMSEID--RMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM 336
                I+  R   +QGK   + K  +A  IT++ H  +E  +A     + F        +
Sbjct: 272 EHPDRIEAIRQELVQGKNPRDIKYALAEIITSLYHTEQEVIEAKEYYDKAFIKKAIPDQI 331

Query: 337 PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
           P +++     S  + ++ L+V+ GF  S +E RR ++ N +++N         Q KL+  
Sbjct: 332 PELAVKAQ--SHLVEIIPLLVENGFIKSNSEFRRLVQQNGVQLN---------QHKLKHI 380

Query: 397 DST---GNIKLSFGKKNHI 412
           DS    G++ L  GKK  +
Sbjct: 381 DSILLYGDV-LKIGKKRFV 398


>gi|149194046|ref|ZP_01871144.1| tyrosyl-tRNA synthetase [Caminibacter mediatlanticus TB-2]
 gi|149135999|gb|EDM24477.1| tyrosyl-tRNA synthetase [Caminibacter mediatlanticus TB-2]
          Length = 410

 Score =  120 bits (300), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 102/360 (28%), Positives = 173/360 (48%), Gaps = 22/360 (6%)

Query: 37  TAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRS 96
           T   G+D TA  LH GH   L  L   QK G K   L+G  T+ IGDP+ +  +R+M+  
Sbjct: 49  TIKAGFDPTAPDLHLGHTVLLQKLKTFQKYGAKVQFLIGDFTAQIGDPTGKSATRKMLTP 108

Query: 97  QEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSF 156
           +E+++N +  +     F       TD +   N TWL  +    ++ E+ + ++V RML  
Sbjct: 109 EEVKQNAKTYEA--QVFKILDKDLTDVVF--NSTWLNKLGATGIV-ELTTTYTVARMLER 163

Query: 157 ESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL 216
           +    R K +  ++  EF Y +LQ YD V L  +    +++GG+DQ  N++ G  L +  
Sbjct: 164 DDFEKRFKSQTPIAISEFIYPLLQGYDSVALKSD----IEIGGTDQKFNLLMGRHLQKVY 219

Query: 217 KTPK-LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAK 274
              K    +  PLL    G  KM K+L   I + ++  +    +    +I D  +  + +
Sbjct: 220 NIGKEQSVIMMPLLVGLDGVNKMSKSLGNYIGITEDANT---IFAKVMSISDELMWDWYE 276

Query: 275 RLTTLPMSEIDRMAKLQGKEINE--AKKIIATEITTMVHGREEAEKAATAAMECFDMSIH 332
            L+   + EI  + +     +N    K+++A EI    HG+   EKA     E FD  +H
Sbjct: 277 LLSDKSIEEIKELKEQVKNGLNPKVVKEMLAIEIVDRFHGKGTGEKAK----EHFD-KVH 331

Query: 333 SQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
            Q+     I + E+     ++  +V    A S +EARRH+K  A++IN   IS++ + ++
Sbjct: 332 KQNQIPDDIEEFEIE-PQNIVDALVTTKLANSKSEARRHIKGGAVRINQEKISSQDINLE 390


>gi|297181938|gb|ADI18115.1| tyrosyl-tRNA synthetase [uncultured Acidobacteriales bacterium
           HF0200_23L05]
          Length = 414

 Score =  120 bits (300), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 98/360 (27%), Positives = 172/360 (47%), Gaps = 28/360 (7%)

Query: 36  VTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMR 95
           +T  +G+D TA  LH GH   +  +   Q+ GH+ I L+G  T +IGDP+ R ++R  + 
Sbjct: 46  LTVKVGFDPTAPDLHLGHTVLIRKMKHFQELGHRVIFLIGDFTGLIGDPTGRSKTRPALS 105

Query: 96  SQEIQENIEKIKGIFSSFIKYGTGKTDALMLN-NETWLCSIKYIDLLREIGSFFSVNRML 154
           S EI+EN E  K      +       D  +++ N +WL  +     +R + + ++V +ML
Sbjct: 106 SAEIEENAETYKRQVFKLL-----DPDKTVVDFNSSWLSGLGSDGWVR-LAARYNVAQML 159

Query: 155 SFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
                R R +  Q ++  EF Y + QAYD V L  +    +++GG+DQ  N+  G D+  
Sbjct: 160 ERRDFRKRYETGQPIAIHEFLYPLAQAYDSVYLHAD----VELGGTDQLFNLNVGRDIMP 215

Query: 215 RLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFA 273
             +      LT+PLL    GT KM KT    + +N+    P   +    ++ D  +  + 
Sbjct: 216 SYEVRPQIVLTTPLLVGLDGTEKMSKTAGNYVGINE---PPGEMFGKLMSVSDDLMWDYY 272

Query: 274 KRLTTLPMSEIDRMAKLQGKEIN---EAKKIIATEITTMVHGREEAEKAATAAMECFDMS 330
           + LT L +++I+ + +     +    +AK  +A  +    H  +EA++AA      F+  
Sbjct: 273 ELLTDLSVADINTLKQGVASGVTHPKQAKVDLAKHVVGDFHSVQEAQEAAGE----FERR 328

Query: 331 IHSQHMPTISISKDEVSR----GMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISN 386
              + +P   + ++ + R    G  L  L+V AG A S + A R L    +KI+   + +
Sbjct: 329 FSRKEVP--EVVEEWMGRVPEEGQRLTALMVAAGMAKSGSAATRVLSQGGVKIDGVRVED 386


>gi|317489805|ref|ZP_07948303.1| tRNA synthetase class I [Eggerthella sp. 1_3_56FAA]
 gi|325830069|ref|ZP_08163526.1| tyrosine--tRNA ligase [Eggerthella sp. HGA1]
 gi|316911090|gb|EFV32701.1| tRNA synthetase class I [Eggerthella sp. 1_3_56FAA]
 gi|325487536|gb|EGC89974.1| tyrosine--tRNA ligase [Eggerthella sp. HGA1]
          Length = 403

 Score =  120 bits (300), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 87/272 (31%), Positives = 139/272 (51%), Gaps = 16/272 (5%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  L   Q  GH    ++G GT++IGDPS R+ +R  + S++I
Sbjct: 38  LGVDPTAPDIHLGHAVPLRKLRQFQDLGHGVTLIIGDGTALIGDPSGRNTTRPQLTSEQI 97

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           + N +    +  +F      KT  L  N+E WL S+   DLL+ + S F+V R+L  +  
Sbjct: 98  KANAQTY--VDQAFKILDPEKT-TLRYNSE-WLLSLNMEDLLK-LASNFTVARILERDDF 152

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R    Q +S  EF Y ++QAYD V +  +    +++GG+DQ  N++ G +L E++   
Sbjct: 153 HKRYTNSQPISLHEFLYPLMQAYDSVVIKAD----VELGGTDQLFNLLAGRELMEKMGME 208

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               LT PLL    G  KM K+    I L  E   P + +    +I D  +V + +  + 
Sbjct: 209 PQVCLTLPLLEGTDGVQKMSKSYGNYIGLTDE---PADMFGKVMSIPDELMVKYYRLASA 265

Query: 279 LPMSEIDRMAK-LQGKEI--NEAKKIIATEIT 307
           LP+ +ID + + L   E+  N+ K+ +A  I 
Sbjct: 266 LPVDQIDEIERGLAADELHPNKVKRALAKNIV 297


>gi|57234594|ref|YP_181343.1| tyrosyl-tRNA synthetase [Dehalococcoides ethenogenes 195]
 gi|115305803|sp|Q3Z8V6|SYY_DEHE1 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|57225042|gb|AAW40099.1| tyrosyl-tRNA synthetase [Dehalococcoides ethenogenes 195]
          Length = 396

 Score =  120 bits (300), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 101/369 (27%), Positives = 175/369 (47%), Gaps = 19/369 (5%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D ++  +H GH+  L  L  LQ  GH+ + ++G  T+ IGDPS    +R M+ +++++
Sbjct: 40  GFDPSSPDIHLGHMVALRKLRQLQDLGHQVVLIVGDWTAQIGDPSGASVTRPMLSAEQVK 99

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
            N    K     F K        +   +E W  + K  D++R + S F+V +ML+ +   
Sbjct: 100 AN---AKTYLEQFFKIVDKDKTEVRWQSE-WYANFKLEDVVR-LSSKFTVAQMLARDDFA 154

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R    + +S  E  Y +LQAYD V +  +    ++ GG+DQ  N++ G +L E L    
Sbjct: 155 KRYAAGKPISVTELLYPMLQAYDSVMVKSD----VEFGGTDQKFNLLVGRELQEMLGQKP 210

Query: 221 LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTL 279
              L  P+L    G  KM K+L   I + +E   P   +    +I D  ++ + + +T +
Sbjct: 211 QQVLMVPILVGTDGVHKMSKSLGNYIGVAEE---PTEIFGKCMSIPDELILQYFELVTDI 267

Query: 280 PMSEI-DRMAKLQGKEINEA--KKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM 336
           P +EI D   ++    +N    KK +A E+ T ++    AE+A              + M
Sbjct: 268 PATEIADFKNQMANGLVNPMVLKKRLARELITQLYSAAAAEEADAQFTRVVQRGEIPEDM 327

Query: 337 PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
           P   +   E    + ++  I+KA  A S +EARR L+   ++IN++ IS+    +K  D 
Sbjct: 328 PECRLENGE---SICVIDFIIKADLAKSKSEARRLLEQGGVEINSAKISDPGTTVKCGDI 384

Query: 397 DSTGNIKLS 405
              G  + S
Sbjct: 385 IKAGKRRYS 393


>gi|224417654|ref|ZP_03655660.1| tyrosyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
 gi|253827006|ref|ZP_04869891.1| tyrosyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
 gi|313141200|ref|ZP_07803393.1| tyrosyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
 gi|253510412|gb|EES89071.1| tyrosyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
 gi|313130231|gb|EFR47848.1| tyrosyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
          Length = 404

 Score =  119 bits (299), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 98/365 (26%), Positives = 172/365 (47%), Gaps = 30/365 (8%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   L  L   QK G     L+G  T +IGDP+ + E+R+ +  +++ 
Sbjct: 46  GFDPTAPDLHLGHTVLLQKLATFQKYGGIVCFLIGDFTGMIGDPTGKSETRKPLNKEQVL 105

Query: 101 ENI----EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSF 156
            N     E++  +  S        +   +  N  WL ++    ++ E+ + FSV RML  
Sbjct: 106 ANAKTYEEQVYKVLDS--------SKMEIAFNSKWLDNLGTRGMI-ELAAKFSVARMLER 156

Query: 157 ESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL 216
           +    R K +  +S +EF Y +LQ YD V L    +C ++ GG+DQ  N++ G  L    
Sbjct: 157 DDFEKRFKNQNPISIVEFFYPLLQGYDSVAL----ECDIECGGTDQKFNLLMGRHLQRAY 212

Query: 217 KTPKLFALT-SPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAK 274
             PK  ++   PLL    G  KM K+L   + + +E   P   +    +I D  +  + +
Sbjct: 213 GIPKEQSVVMVPLLEGLDGVHKMSKSLGNYVGITQE---PKEMFGRLLSISDTLMWRYYE 269

Query: 275 RLTTLPMSEIDRMAKLQGK---EINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSI 331
            L++  ++EI  + +   K       AK+ +A EI T  +  ++A++A     + F    
Sbjct: 270 LLSSKSLAEIQEIKESVEKGNLHPKTAKENLALEIITRYYDAQKAKEAKEEFDKVFSKDE 329

Query: 332 HSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
               MPT      E + G+ +  L+ + G   S +EA R +K   +K+N   + + KL +
Sbjct: 330 MPSQMPTF-----EKNSGIWIAQLMSECGLCVSNSEALRLIKQGGVKVNGQKLEDSKLNL 384

Query: 392 KLQDF 396
           ++ ++
Sbjct: 385 QIGEY 389


>gi|238026240|ref|YP_002910471.1| tyrosyl-tRNA synthetase [Burkholderia glumae BGR1]
 gi|237875434|gb|ACR27767.1| Tyrosyl-tRNA synthetase [Burkholderia glumae BGR1]
          Length = 413

 Score =  119 bits (299), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 100/364 (27%), Positives = 184/364 (50%), Gaps = 28/364 (7%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  +  LQ  GH  I L+G  TS+IGDPS R+ +R  +  ++I
Sbjct: 55  LGLDPTAPDIHIGHTVVLNKMRQLQDLGHTVIFLIGDFTSLIGDPSGRNATRPPLTREQI 114

Query: 100 QENIEKIKGIF-SSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
           + N    K  F  + +     KT+  +  N  W   +   D + ++ S ++V R+L  E 
Sbjct: 115 EAN---AKTYFEQAALVLDRDKTE--IRYNSEWSMPLG-ADGMIKLASRYTVARILERED 168

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
              R +    +S  EF Y ++Q YD V L    +  L++GG+DQ  N++ G +L ++   
Sbjct: 169 FTKRFQGGVPISIHEFLYPLMQGYDSVAL----NADLELGGTDQKFNLLVGRELQKQYGQ 224

Query: 219 PKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT 277
                LT PLL    G  KM K+    + ++++   P   +    +I D  +  + + L+
Sbjct: 225 EPQCILTMPLLEGLDGVEKMSKSKGNYVGISEK---PAEMFGKLMSISDVLMWRYFELLS 281

Query: 278 TLPMSEIDRM-AKLQ-GKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIH--- 332
             PM EI++  A+++ G+   + K ++A EI    H + +AE+    A+E F+       
Sbjct: 282 FRPMREIEKFKAEIEAGRNPRDFKVLLAQEIVARFHSQADAEQ----ALEDFNHRARGGV 337

Query: 333 SQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
              +P++S+    ++ G     L+ +AG   ST+EA R+++   +KI+ + +S++ L+++
Sbjct: 338 PDDIPSVSLGGAPLAIGQ----LLKQAGLVPSTSEALRNIEQGGVKIDGTTVSDKGLKVE 393

Query: 393 LQDF 396
             ++
Sbjct: 394 AGEY 397


>gi|255320689|ref|ZP_05361866.1| tyrosyl-tRNA synthetase [Acinetobacter radioresistens SK82]
 gi|255302305|gb|EET81545.1| tyrosyl-tRNA synthetase [Acinetobacter radioresistens SK82]
          Length = 404

 Score =  119 bits (299), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 94/377 (24%), Positives = 174/377 (46%), Gaps = 24/377 (6%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           I+SE   + ++   R L +           G+D TA  LH GH   +  L   Q  GH  
Sbjct: 21  IISEEDLLKKLKENRPLKVKA---------GFDPTAPDLHLGHTVLINKLKVFQDLGHDV 71

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
             L+G  T++IGDP+ +  +R  +  +++ EN +  +      ++    K   ++ N+E 
Sbjct: 72  YFLIGDYTAMIGDPTGKSATRPPLSREQVLENAKTYQEQVFKILEPNKTK---VVFNSE- 127

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           W  S    DL+ ++ S  +V RML  +    R   +Q ++  EF Y ++Q YD + L   
Sbjct: 128 WFASKTAADLI-QLASQQTVARMLERDDFTKRYSSQQPIAIHEFLYPLVQGYDSIAL--- 183

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNK 249
            +  +++GG+DQ  N++ G  L  R        +T P+L    G  KM K+L   I +  
Sbjct: 184 -EADVELGGTDQTFNLLMGRTLQGRYHQEPQVCITVPILEGLDGVQKMSKSLGNYIGV-- 240

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATEIT 307
              +P   +Q   ++ D+ +  + + L+   M EI  + K  ++G+   E K+I+A E+ 
Sbjct: 241 -FDAPGAMYQKVLSMPDSLIERYFELLSFKSMPEIQDLLKEMVEGRNPQEIKRILALELV 299

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
              HG E A  A   A          +  P ++IS+ E    + + +++  AG   +  +
Sbjct: 300 ERFHGSEAAANAHKGAGNIITEGELPEGTPEVTISRAEFGGEIFIASILRTAGLTKNAAQ 359

Query: 368 ARRHLKSNAIKINNSII 384
           A+  +   A+K++  ++
Sbjct: 360 AKDAVARGAVKVDWEVV 376


>gi|262380680|ref|ZP_06073833.1| tyrosyl-tRNA synthetase [Acinetobacter radioresistens SH164]
 gi|262297628|gb|EEY85544.1| tyrosyl-tRNA synthetase [Acinetobacter radioresistens SH164]
          Length = 410

 Score =  119 bits (299), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 94/377 (24%), Positives = 174/377 (46%), Gaps = 24/377 (6%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           I+SE   + ++   R L +           G+D TA  LH GH   +  L   Q  GH  
Sbjct: 27  IISEEDLLKKLKENRPLKVKA---------GFDPTAPDLHLGHTVLINKLKVFQDLGHDV 77

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
             L+G  T++IGDP+ +  +R  +  +++ EN +  +      ++    K   ++ N+E 
Sbjct: 78  YFLIGDYTAMIGDPTGKSATRPPLSREQVLENAKTYQEQVFKILEPNKTK---VVFNSE- 133

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           W  S    DL+ ++ S  +V RML  +    R   +Q ++  EF Y ++Q YD + L   
Sbjct: 134 WFASKTAADLI-QLASQQTVARMLERDDFTKRYSSQQPIAIHEFLYPLVQGYDSIAL--- 189

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNK 249
            +  +++GG+DQ  N++ G  L  R        +T P+L    G  KM K+L   I +  
Sbjct: 190 -EADVELGGTDQTFNLLMGRTLQGRYHQEPQVCITVPILEGLDGVQKMSKSLGNYIGV-- 246

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATEIT 307
              +P   +Q   ++ D+ +  + + L+   M EI  + K  ++G+   E K+I+A E+ 
Sbjct: 247 -FDAPGAMYQKVLSMPDSLIERYFELLSFKSMPEIQDLLKEMVEGRNPQEIKRILALELV 305

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
              HG E A  A   A          +  P ++IS+ E    + + +++  AG   +  +
Sbjct: 306 ERFHGSEAAANAHKGAGNIITEGELPEGTPEVTISRAEFGGEIFIASILRTAGLTKNAAQ 365

Query: 368 ARRHLKSNAIKINNSII 384
           A+  +   A+K++  ++
Sbjct: 366 AKDAVARGAVKVDWEVV 382


>gi|56475931|ref|YP_157520.1| tyrosyl-tRNA synthetase [Aromatoleum aromaticum EbN1]
 gi|81358432|sp|Q5P7U2|SYY_AZOSE RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|56311974|emb|CAI06619.1| t-RNA synthetase, class Ib [Aromatoleum aromaticum EbN1]
          Length = 399

 Score =  119 bits (299), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 95/355 (26%), Positives = 172/355 (48%), Gaps = 17/355 (4%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   L  L   Q+ GH+ + L+G  T++IGDPS ++ +R  +  ++I 
Sbjct: 39  GFDPTAPDLHLGHTVLLNKLRHFQELGHQVMFLVGDFTAMIGDPSGKNATRPPLSREQIL 98

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           EN    +     F      KT+     N +W+ S+    ++R + S ++V RML  +   
Sbjct: 99  ENARTYQE--QVFKILDPDKTEICF--NSSWMESLGTAGMIR-LASRYTVARMLERDDFA 153

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R    Q+++  EF Y + Q YD V +  +    +++GG+DQ  N++ G +L +  +   
Sbjct: 154 KRYAGGQAIAIHEFLYPLCQGYDSVAMRAD----VELGGTDQKFNLLVGRELQKHDRQAP 209

Query: 221 LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTL 279
              L  PLL    G  KM K+L   I + +   +P   +    +I D+ +  +   L+  
Sbjct: 210 QCVLMMPLLEGLDGVNKMSKSLGNYIGITE---APREIFGKIMSISDSLMWRYFDLLSFH 266

Query: 280 PMSEIDRM-AKLQ-GKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMP 337
           P  EI R  A+++ G+   E K ++A EI    H    AE A       F   +    +P
Sbjct: 267 PAVEIARYRAEVEGGRNPRELKVLLAQEIVARFHSHAAAEDALADFEARFQRGVLPDDIP 326

Query: 338 TISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
            +++   +   G+ +  ++ +AG   ST+EA R ++  A+++N   + ++ L ++
Sbjct: 327 EVNVVVGD--GGLPVFQVVKQAGLTGSTSEALRMIEQGAVRLNGERVEDKGLVLQ 379


>gi|319778566|ref|YP_004129479.1| Tyrosyl-tRNA synthetase [Taylorella equigenitalis MCE9]
 gi|317108590|gb|ADU91336.1| Tyrosyl-tRNA synthetase [Taylorella equigenitalis MCE9]
          Length = 407

 Score =  119 bits (299), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 99/374 (26%), Positives = 185/374 (49%), Gaps = 27/374 (7%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  LH GH   L  +  LQ  GH+ I L+G  T+ IGDPS R+ +R  +  ++I
Sbjct: 49  LGLDPTAPDLHLGHTVVLTKMRQLQDMGHEVIFLIGDFTATIGDPSGRNATRPPLTKEQI 108

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           + N +      S  +      +  ++  N  W  ++    L+ E+ S ++V R++  +  
Sbjct: 109 EVNAQTYYDQASKVLD----PSKTVISYNSKWCDALGARGLI-ELASKYTVARIMERDDF 163

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R K    +S  E  Y ++Q YD V L  +    +++GG+DQ  N++ G +L +    P
Sbjct: 164 TKRFKGGIPISMHEILYPLMQGYDSVALKSD----MELGGTDQKFNLLVGRELQKEYGQP 219

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
           +   LT PLL    G  KM K+ +  I + +   +P + +    +I D+ + ++ + +++
Sbjct: 220 QQTVLTMPLLVGLDGVEKMSKSKNNYIGITE---TPDSMFGKIMSISDSLMWNYYELISS 276

Query: 279 LPMSEIDRMAKLQGKEINEA--KKIIATEITTMVHGREEAEKA-ATAAMECFDMSIHSQH 335
             + EI ++ +     IN    K  +A EI T  H  + AEKA A   +   D  I  + 
Sbjct: 277 KSLDEIKKLKQDVEDGINPRNIKVALAQEIITRFHNSQAAEKALADFELRFRDGQI-PED 335

Query: 336 MPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           +P +++   E    MG+++++ ++G A S +EA R++    +K++ S + ++ L +K   
Sbjct: 336 IPEVTLPGPE----MGIVSVLRESGLAVSGSEASRNIVQGGVKVDGSKVEDKGLILK--- 388

Query: 396 FDSTGNIKLSFGKK 409
              +G   +  GK+
Sbjct: 389 ---SGTYVVQIGKR 399


>gi|126699125|ref|YP_001088022.1| tyrosyl-tRNA synthetase [Clostridium difficile 630]
 gi|254975078|ref|ZP_05271550.1| tyrosyl-tRNA synthetase [Clostridium difficile QCD-66c26]
 gi|255092467|ref|ZP_05321945.1| tyrosyl-tRNA synthetase [Clostridium difficile CIP 107932]
 gi|255100552|ref|ZP_05329529.1| tyrosyl-tRNA synthetase [Clostridium difficile QCD-63q42]
 gi|255306490|ref|ZP_05350661.1| tyrosyl-tRNA synthetase [Clostridium difficile ATCC 43255]
 gi|255314205|ref|ZP_05355788.1| tyrosyl-tRNA synthetase [Clostridium difficile QCD-76w55]
 gi|255516884|ref|ZP_05384560.1| tyrosyl-tRNA synthetase [Clostridium difficile QCD-97b34]
 gi|255649985|ref|ZP_05396887.1| tyrosyl-tRNA synthetase [Clostridium difficile QCD-37x79]
 gi|260683136|ref|YP_003214421.1| tyrosyl-tRNA synthetase [Clostridium difficile CD196]
 gi|260686734|ref|YP_003217867.1| tyrosyl-tRNA synthetase [Clostridium difficile R20291]
 gi|306520061|ref|ZP_07406408.1| tyrosyl-tRNA synthetase [Clostridium difficile QCD-32g58]
 gi|115250562|emb|CAJ68386.1| Tyrosyl-tRNA synthetase (Tyrosine--tRNA ligase) (TyrRS)
           [Clostridium difficile]
 gi|260209299|emb|CBA62678.1| tyrosyl-tRNA synthetase [Clostridium difficile CD196]
 gi|260212750|emb|CBE03875.1| tyrosyl-tRNA synthetase [Clostridium difficile R20291]
          Length = 402

 Score =  119 bits (299), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 89/352 (25%), Positives = 169/352 (48%), Gaps = 22/352 (6%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D +A  +H GH   L  +  LQ  GH+ + ++G  T  IGDP+ + ++R+ + ++++
Sbjct: 42  LGLDPSAPDIHLGHTVVLRKMKQLQDLGHQIVIIIGDFTGKIGDPTGKSKARKALTTEQV 101

Query: 100 QENIEKI-KGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
             N +   + IF    K  T     ++  N  WL  + + D+++ + +  +V RML  E 
Sbjct: 102 LANAKTYEEQIFKVLDKEKT-----IVRFNSEWLAKLNFEDVIK-LAATITVARMLERED 155

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
            + R + +  +S  EF Y ++QAYD + L    +  +++GG+DQ  N++ G  L      
Sbjct: 156 FKKRYEGQMPISVHEFFYPLMQAYDSIAL----EADIELGGTDQRFNLLMGRSLQREFGM 211

Query: 219 PKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT 277
                +  PL+    G  KM K+L   I +++E    Y   Q    I D  ++ +   +T
Sbjct: 212 ESQIVIMMPLIEGLDGKEKMSKSLGNYIGIDEEAGIMY---QKSMEIPDELIIKYYNLVT 268

Query: 278 TLPMSEIDRM-AKLQGKEIN--EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQ 334
            +   E++++ ++L+   +N  + K  +A EI T+ HG E A++A       F      +
Sbjct: 269 DVHPDEVNKIESQLKEGSVNPRDIKMNLAREIVTLYHGEESAKEAEERFKSVFQKGQIPE 328

Query: 335 HMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISN 386
            + TI + +D    G  L+ ++V      S +E RR      +K+N   + +
Sbjct: 329 DIQTIQVKED----GFDLIEVLVSNEIVKSKSEVRRLASQGGVKVNGEKVED 376


>gi|297172660|gb|ADI23628.1| tyrosyl-tRNA synthetase [uncultured gamma proteobacterium
           HF4000_06A21]
          Length = 401

 Score =  119 bits (299), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 92/354 (25%), Positives = 167/354 (47%), Gaps = 17/354 (4%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   +  +   Q  GH+ + L+G  T +IGDPS ++ +R  +  Q+I+
Sbjct: 41  GFDPTAPDLHIGHTVLVNKMRQFQTFGHEVVFLIGDFTGLIGDPSGKNATRPPLSRQQIE 100

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           EN    +      +     + +     N  W  ++    ++R + +  +V RML  +   
Sbjct: 101 ENAATYEEQVFKILDRDQTRIEF----NSKWGNALGAEGMIR-LAARHTVARMLERDDFS 155

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R +  + +S  EF Y ++Q YD V L    +  +++GG+DQ  N++ G +L ++     
Sbjct: 156 RRYQNGEPISIHEFLYPLMQGYDSVVL----EADVELGGTDQKFNLLVGRELQKQYGQKP 211

Query: 221 LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTL 279
              LT PLL    G  KM K+L  AI + +    P   +    +I D  +  + + L+  
Sbjct: 212 QVVLTMPLLEGLDGVQKMSKSLGNAIGITE---PPAEMFGKLMSISDDLMWRYFELLSFR 268

Query: 280 PMSEID--RMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMP 337
            + EI   R +  +G    + K  +A EI T  H +  A++A  A ++ F   +  + + 
Sbjct: 269 SVVEIRALRRSTEEGANPRDVKYELALEIVTRFHSKSSADRAKQAFVDRFQKGVLPEDLQ 328

Query: 338 TISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
            + +  D    GM +  ++  AG   ST+E  R +   A++I+   +S+  LQ+
Sbjct: 329 EVDV--DSKGEGMSVTHVMRAAGLVASTSEGLRLIDQGAVRIDGERVSDRALQL 380


>gi|78189128|ref|YP_379466.1| tyrosyl-tRNA synthetase [Chlorobium chlorochromatii CaD3]
 gi|115305801|sp|Q3ARF2|SYY_CHLCH RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|78171327|gb|ABB28423.1| tyrosyl-tRNA synthetase [Chlorobium chlorochromatii CaD3]
          Length = 402

 Score =  119 bits (299), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 99/359 (27%), Positives = 174/359 (48%), Gaps = 23/359 (6%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D +   LH GH   L  L   Q  GH  I ++G  T++IGDPS + ++R  + ++E 
Sbjct: 44  LGADPSRPDLHLGHSVVLRKLRDFQDLGHHAILIIGNFTAMIGDPSGKSKTRPQLSAEEA 103

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
            EN    +  F   IK      +  + +N  WL ++ + D++R + S ++V RML     
Sbjct: 104 AEN---GRSYFEQAIKI-LDAANTTLCSNADWLGAMTFADVIR-LSSHYTVARMLERNDF 158

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R + ++ +S  EF Y + Q  D V L  +    +++GG+DQ  N++ G DL       
Sbjct: 159 EQRYRAQEPISIHEFLYPLAQGMDSVHLKND----VELGGTDQKFNLLVGRDLQREYGIA 214

Query: 220 KLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               +T PLL    G  KM K+L  AI       +P + +    +I D  + ++++ L +
Sbjct: 215 PQVCITMPLLVGTDGKDKMSKSLDNAISFTD---TPNDMYGRALSIPDTLIETYSRLLLS 271

Query: 279 LPMSEIDRMAKLQGKEINE--AKKIIATEITTMVHGREEAEKAATAAMECFD-MSIHSQH 335
              + ++ +  L   E N   AK+ +A  I    +  E    AA+AA E FD + +H Q 
Sbjct: 272 QFGAALNEI--LSQIETNPRLAKRAMARHIVADYYSPE----AASAAEEHFDKLFVHKQA 325

Query: 336 MPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
              + + + E +  M ++ L+   G A S +EARR +++ ++ I++  I +    I L+
Sbjct: 326 PDNLELLELEAT-SMPIIDLLTLLGAAPSKSEARRMIQAKSVSIDDEKIEDFNAVIALE 383


>gi|78065245|ref|YP_368014.1| tyrosyl-tRNA synthetase [Burkholderia sp. 383]
 gi|115305798|sp|Q39JJ6|SYY_BURS3 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|77965990|gb|ABB07370.1| tyrosyl-tRNA synthetase [Burkholderia sp. 383]
          Length = 413

 Score =  119 bits (298), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 99/364 (27%), Positives = 182/364 (50%), Gaps = 28/364 (7%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  +  LQ  GH  I L+G  TS+IGDPS R+ +R  +  ++I
Sbjct: 55  LGLDPTAPDIHIGHTVVLNKMRQLQDLGHTVIFLIGDFTSLIGDPSGRNATRPPLTREQI 114

Query: 100 QENIEKIKGIF-SSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
           + N    K  F  + +     KT+  +  N  W   +   D + ++ S ++V R+L  E 
Sbjct: 115 ESN---AKTYFEQAALVLDRDKTE--IRYNSEWSMPLG-ADGMIKLASRYTVARILERED 168

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
              R +    +S  EF Y ++Q YD V L    +  L++GG+DQ  N++ G +L ++   
Sbjct: 169 FTKRFQGGVPISIHEFLYPLMQGYDSVAL----NADLELGGTDQKFNLLVGRELQKQYGQ 224

Query: 219 PKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT 277
            +   LT PLL    G  KM K+    + ++++   P + +    +I D  +  + + L+
Sbjct: 225 EQQCILTMPLLEGLDGVEKMSKSKGNYVGISEQ---PTDMFGKLMSISDTLMWRYFELLS 281

Query: 278 TLPMSEIDRMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIH--- 332
             PM EI    +    G+   + K ++A EI    H + +AE+    A+E F+       
Sbjct: 282 FRPMDEIGGFKREIEGGRNPRDFKVLLAQEIVARFHSQADAER----ALEDFNHRAKGGV 337

Query: 333 SQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
              +P+++++   ++ G     L+ +AG   ST+EA R+++   +KI+ + +S++ L+++
Sbjct: 338 PDDIPSVTLAGAPLAIGQ----LLKQAGLVPSTSEALRNIEQGGVKIDGATVSDKGLKVE 393

Query: 393 LQDF 396
             +F
Sbjct: 394 AGEF 397


>gi|220906293|ref|YP_002481604.1| tyrosyl-tRNA synthetase [Cyanothece sp. PCC 7425]
 gi|219862904|gb|ACL43243.1| tyrosyl-tRNA synthetase [Cyanothece sp. PCC 7425]
          Length = 403

 Score =  119 bits (298), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 95/350 (27%), Positives = 165/350 (47%), Gaps = 23/350 (6%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G D T S +H GH   +  L   Q  GH  + ++G  T+ IGDP+ + E RR +   E+ 
Sbjct: 45  GIDPTGSEVHLGHSIPIRKLRAFQDAGHVAVLIIGDFTARIGDPTGKSEVRRQLSEAEVA 104

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLN-NETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
            N++         + + T   D L ++ N TWL  +  +    E+ +  +V +ML+ E  
Sbjct: 105 ANVKTYLEQIRPILDFDT--PDRLEIHYNSTWLAKLD-LGQTAELLATMTVGQMLAKEGF 161

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R  +E+ +   EF Y ++Q YD V +  +    +++GG+DQ  NI  G DL       
Sbjct: 162 DLRFSKEEPIYLHEFLYPLMQGYDSVAVRSD----VELGGTDQKFNIAVGRDLQRHFGLS 217

Query: 220 KLFALTSP-LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
             F L  P LL T    KM K+L+  + L +   +P + +     I D  + S+ + LT 
Sbjct: 218 PQFGLLMPILLGTDGAQKMSKSLNNYVGLQE---NPISMYSKLEKIPDGVIESYFELLTD 274

Query: 279 LPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEA--EKAATAAMECFDMSIHSQHM 336
           LP++++    +       + +K++  EIT   HG   A   +A  AAM        ++ +
Sbjct: 275 LPLADLPENPR-------DRQKLLGVEITRQFHGEAVALQTQAELAAMVMQGQMGQAELV 327

Query: 337 PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISN 386
           P  S++  +    + L  LI  +G  +S++EARR ++   +K++   I  
Sbjct: 328 PEFSLTGQKFP--VPLFYLISASGLVSSSSEARRQIQGGGVKLDGKRIEQ 375


>gi|307151866|ref|YP_003887250.1| tyrosyl-tRNA synthetase [Cyanothece sp. PCC 7822]
 gi|306982094|gb|ADN13975.1| tyrosyl-tRNA synthetase [Cyanothece sp. PCC 7822]
          Length = 405

 Score =  119 bits (298), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 100/379 (26%), Positives = 176/379 (46%), Gaps = 29/379 (7%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D T + +H GH      L   Q  GH  + ++G  T+ IGDP+ + E R+ + ++++
Sbjct: 47  LGIDPTGTEIHLGHSIPFRKLRAFQDAGHTAVVIIGDFTAQIGDPTGKSEVRKQLTAEQV 106

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           +EN           + + T     +  N+E WL  +   D+++ + S  +V +ML+ E  
Sbjct: 107 RENAHDYLKQLRPILDFDTPGRLEIRYNSE-WLGKLDLSDIIKLL-STMTVGQMLAKEGF 164

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R ++E  +   EF Y ++Q YD V +    D  +++GG+DQ  NI  G DL       
Sbjct: 165 AERYEKETPIYLHEFLYPLMQGYDSVAI----DADVELGGTDQKFNIAVGRDLQRYFGKK 220

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
             F L  P++    G  KM K+L+  + L ++  S Y+  +    I DA +  + + LT 
Sbjct: 221 PQFGLLLPIILGTDGVQKMSKSLNNYVGLREDALSMYSKLE---KIPDAVIKDYFELLTN 277

Query: 279 LPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFD--MSIHSQHM 336
           L + E+    +       E +K++ATEI +  H  E A +A  AA+       +  +  +
Sbjct: 278 LSLQELPSNPR-------ECQKLLATEIVSQYHSVEAAAEAQKAAIALVQGGGTTSTDAV 330

Query: 337 PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
           P  S+S  E      L  ++      +S+ E RR ++  A++++   IS   L      F
Sbjct: 331 PEYSLSGIEFP--AKLFYILSATRLCSSSGEGRRQIQGGAVRLDGERISEVDLT-----F 383

Query: 397 DSTGNIK---LSFGKKNHI 412
           DS   ++   L  GKK  +
Sbjct: 384 DSPQQLQGKVLQVGKKKFV 402


>gi|86606736|ref|YP_475499.1| tyrosyl-tRNA synthetase [Synechococcus sp. JA-3-3Ab]
 gi|115305823|sp|Q2JSX8|SYY_SYNJA RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|86555278|gb|ABD00236.1| tyrosyl-tRNA synthetase [Synechococcus sp. JA-3-3Ab]
          Length = 417

 Score =  119 bits (298), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 105/382 (27%), Positives = 181/382 (47%), Gaps = 27/382 (7%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D T   LH GH   L  L   Q  GH  I L+G  T+++GDP+ + E+R  +   E+
Sbjct: 55  LGIDPTRPDLHLGHAVVLRKLRQFQDAGHVAILLIGDFTALVGDPTGQSEARPRLTPAEV 114

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           +EN           + + T     +  N+E WL  +   +L+ E+ +  +V +ML+ E  
Sbjct: 115 EENARTYLEQAGKILDFETPGRLEVRRNSE-WLARLTLSELI-ELQAQMTVGQMLAKEDF 172

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE-RLKT 218
             R +    +   EF Y +LQ YD V L    +  +++GG+DQ  N++ G +L   + +T
Sbjct: 173 AQRYRSGTPIYLHEFLYPLLQGYDSVAL----EADVELGGTDQRFNLLVGRELQLWKGQT 228

Query: 219 PKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT 277
           P+ F LT PLL    G  KM K+ +  + L ++   P   +     + D  V  + + LT
Sbjct: 229 PQ-FCLTVPLLEGLDGYQKMSKSKNNYVGLTED---PLTMYSKLEKVPDQLVERYFELLT 284

Query: 278 TLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMS--IHSQH 335
           ++P SE+   A  + ++I  AK ++A       H  E AE+A   A         + +  
Sbjct: 285 SVPPSELP--ADPRQRQILLAKTLVA-----QFHSSEAAEEAQRTAQALVLQGNLVETGS 337

Query: 336 MPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           +PT +I    +S  + L  ++ ++G   S  EARR ++  A++++   + +  L+   Q 
Sbjct: 338 IPTFAIQC--LSYPVKLSYILRESGLCKSAAEARRQIQGGAVRLDGQKVEDPDLEFA-QA 394

Query: 396 FDSTGNIKLSFGKKNHIICHLC 417
            +  G + L  GKK    C L 
Sbjct: 395 SELDGRV-LQVGKK--AFCRLV 413


>gi|189426548|ref|YP_001953725.1| tyrosyl-tRNA synthetase [Geobacter lovleyi SZ]
 gi|189422807|gb|ACD97205.1| tyrosyl-tRNA synthetase [Geobacter lovleyi SZ]
          Length = 401

 Score =  119 bits (298), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 101/377 (26%), Positives = 180/377 (47%), Gaps = 25/377 (6%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   +  L   Q+ GH    L+G  T +IGDP+ + E+R+++  +++ 
Sbjct: 40  GFDPTAPDLHLGHTVLIQKLRQFQQLGHDVHFLIGDFTGMIGDPTGKSETRKVLTREDVL 99

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
            N E  K     F      KT  +   N +WL  +    ++  + S ++V RML  +   
Sbjct: 100 RNAETYKE--QVFKILDPEKTKVVF--NSSWLNELGCGGMIG-LASKYTVARMLERDDFH 154

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLG-ERLKTP 219
            R   +Q ++  EF Y ++Q YD V +  +    +++GG+DQ  N++ G +L  E  +TP
Sbjct: 155 KRYSTQQPIAIHEFLYPLIQGYDSVAMKAD----VELGGTDQKFNLLMGRELQREWGQTP 210

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
           +   LT PLL    G  KM K+L   I +++   +P   +    +I D  ++ + + L+ 
Sbjct: 211 QC-VLTMPLLEGLDGVNKMSKSLGNYIGISE---APDEIFGKVMSISDELMLRYYELLSD 266

Query: 279 LPMSEIDRM-AKLQGKEINE--AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQH 335
             ++EI+++ + L    ++   AKK +  EI T  HG    + A    ++ F  +     
Sbjct: 267 KSLAEIEQLKSGLADGSLHPMAAKKALGREIVTRFHGAGAGDTAEENFVKRFKENEIPDE 326

Query: 336 MPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           MP +S    +    + L   + +AG   S  EARR +    +K+N   +SN  L++    
Sbjct: 327 MPQVSYGTADCP--LLLAKALTEAGLTKSNGEARRSIDQGGVKLNGEKVSNTNLELT--- 381

Query: 396 FDSTGNIKLSFGKKNHI 412
             + G   +  GK+  +
Sbjct: 382 --AAGEYIVQIGKRRFV 396


>gi|83653807|gb|ABC37870.1| tyrosyl-tRNA synthetase [Burkholderia thailandensis E264]
          Length = 489

 Score =  119 bits (298), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 105/375 (28%), Positives = 182/375 (48%), Gaps = 50/375 (13%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  +  LQ  GH  I L+G  TS+IGDPS R+ +R  +  ++I
Sbjct: 131 LGLDPTAPDIHLGHTVVLNKMRQLQDLGHTVIFLIGDFTSLIGDPSGRNATRPPLTREQI 190

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKY---------IDLLREIGSFFSV 150
           + N    K  F         +  AL+L+ E     I+Y          D + ++ S ++V
Sbjct: 191 ESN---AKTYF---------EQAALVLDREK--TEIRYNSEWSMPLGADGMIKLASRYTV 236

Query: 151 NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGI 210
            RML  E    R +    +S  EF Y ++Q YD V L  N D  L++GG+DQ  N++ G 
Sbjct: 237 ARMLEREDFTKRFQGGIPISIHEFLYPLMQGYDSVAL--NAD--LELGGTDQKFNLLVGR 292

Query: 211 DLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADV 269
           +L ++    +   LT PLL    G  KM K+    + + ++   P + +    +I D   
Sbjct: 293 ELQKQYGQEQQCILTMPLLEGLDGVEKMSKSKGNYVGIGEK---PNDMFGKLMSISD--- 346

Query: 270 VSFAKRLTTLPMSEIDRMAKLQ-----GKEINEAKKIIATEITTMVHGREEAEKAATAAM 324
           V   +    L    +D +A+L+     G+   + K ++A EI    H + +AE+    A+
Sbjct: 347 VLMWRYFELLSFRSLDEIARLRGEAEGGRNPRDFKVMLAQEIVARFHSQADAER----AL 402

Query: 325 ECFDMSIH---SQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINN 381
           E F+          +PT++++   ++ G     L+ +AG   ST+EA R+++   +KI+ 
Sbjct: 403 EDFNHRAKGGVPDDIPTVTLAGAPLAIGQ----LLKQAGLVPSTSEALRNIEQGGVKIDG 458

Query: 382 SIISNEKLQIKLQDF 396
           + +S++ L++   +F
Sbjct: 459 ATVSDKALKVDAGEF 473


>gi|161723158|ref|YP_441787.2| tyrosyl-tRNA synthetase [Burkholderia thailandensis E264]
 gi|167618714|ref|ZP_02387345.1| tyrosyl-tRNA synthetase [Burkholderia thailandensis Bt4]
 gi|257137954|ref|ZP_05586216.1| tyrosyl-tRNA synthetase [Burkholderia thailandensis E264]
 gi|115305799|sp|Q2SZ62|SYY_BURTA RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
          Length = 413

 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 103/375 (27%), Positives = 180/375 (48%), Gaps = 50/375 (13%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  +  LQ  GH  I L+G  TS+IGDPS R+ +R  +  ++I
Sbjct: 55  LGLDPTAPDIHLGHTVVLNKMRQLQDLGHTVIFLIGDFTSLIGDPSGRNATRPPLTREQI 114

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKY---------IDLLREIGSFFSV 150
           + N    K  F            AL+L+ E     I+Y          D + ++ S ++V
Sbjct: 115 ESN---AKTYFEQA---------ALVLDREK--TEIRYNSEWSMPLGADGMIKLASRYTV 160

Query: 151 NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGI 210
            RML  E    R +    +S  EF Y ++Q YD V L    +  L++GG+DQ  N++ G 
Sbjct: 161 ARMLEREDFTKRFQGGIPISIHEFLYPLMQGYDSVAL----NADLELGGTDQKFNLLVGR 216

Query: 211 DLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADV 269
           +L ++    +   LT PLL    G  KM K+    + + ++   P + +    +I D   
Sbjct: 217 ELQKQYGQEQQCILTMPLLEGLDGVEKMSKSKGNYVGIGEK---PNDMFGKLMSISD--- 270

Query: 270 VSFAKRLTTLPMSEIDRMAKLQ-----GKEINEAKKIIATEITTMVHGREEAEKAATAAM 324
           V   +    L    +D +A+L+     G+   + K ++A EI    H + +AE+    A+
Sbjct: 271 VLMWRYFELLSFRSLDEIARLRGEAEGGRNPRDFKVMLAQEIVARFHSQADAER----AL 326

Query: 325 ECFDMSIH---SQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINN 381
           E F+          +PT++++   ++ G     L+ +AG   ST+EA R+++   +KI+ 
Sbjct: 327 EDFNHRAKGGVPDDIPTVTLAGAPLAIGQ----LLKQAGLVPSTSEALRNIEQGGVKIDG 382

Query: 382 SIISNEKLQIKLQDF 396
           + +S++ L++   +F
Sbjct: 383 ATVSDKALKVDAGEF 397


>gi|148654018|ref|YP_001281111.1| tyrosyl-tRNA synthetase [Psychrobacter sp. PRwf-1]
 gi|148573102|gb|ABQ95161.1| tyrosyl-tRNA synthetase [Psychrobacter sp. PRwf-1]
          Length = 414

 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 96/374 (25%), Positives = 174/374 (46%), Gaps = 26/374 (6%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           I SE   + ++   R L I           G+D TA  LH GH   +  L   Q  GH+ 
Sbjct: 32  IFSEEDLVAKLKLGRPLKIKA---------GFDPTAPDLHLGHTVLINKLKHFQDLGHEI 82

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEK-IKGIFSSFIKYGTGKTDALMLNNE 129
             L+G  T+ IGDPS ++ +R  +  +++  N +   + +F    K  T      ++ N 
Sbjct: 83  YFLIGDYTAKIGDPSGKNTTRPPLTDEQVMANAKTYAEQVFKILDKEKTN-----VVFNS 137

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
            W   +   D++ ++ S  +V+RML  +    R   +  ++  EF Y ++Q YD + L  
Sbjct: 138 QWFNDMSAGDMI-QLASQLTVSRMLERDDFAKRYASQTPIAIHEFLYPLVQGYDSIAL-- 194

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLN 248
             +  ++MGG+DQ  N++ G  L  R        +T P+L    G  KM K+L   + + 
Sbjct: 195 --EADVEMGGTDQTFNLLMGRTLQGRYGHEAQVCITVPILEGLDGVNKMSKSLGNYVGIE 252

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR-MAKL-QGKEINEAKKIIATEI 306
               +P   +Q   ++ D+ +  + + L+  PMSE+D  MA++  G+   E K+I+A E+
Sbjct: 253 D---APGTMYQKILSMPDSLIHRYFEFLSFKPMSEVDALMAEMAAGRNPQEIKRILAEEL 309

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
               HG E A  A  +A            +P +++  +     + +  ++ +A  A ++ 
Sbjct: 310 IERFHGAEAAANAHKSAGNVLADGELPVDLPEVTLELEAGQEALFITQILNQADLAKNSA 369

Query: 367 EARRHLKSNAIKIN 380
            A+  LK NA+K++
Sbjct: 370 AAKDMLKRNAVKVD 383


>gi|167580608|ref|ZP_02373482.1| tyrosyl-tRNA synthetase [Burkholderia thailandensis TXDOH]
          Length = 413

 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 103/375 (27%), Positives = 180/375 (48%), Gaps = 50/375 (13%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  +  LQ  GH  I L+G  TS+IGDPS R+ +R  +  ++I
Sbjct: 55  LGLDPTAPDIHLGHTVVLNKMRQLQDLGHTVIFLIGDFTSLIGDPSGRNATRPPLTREQI 114

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKY---------IDLLREIGSFFSV 150
           + N    K  F            AL+L+ E     I+Y          D + ++ S ++V
Sbjct: 115 ESN---AKTYFEQA---------ALVLDREK--TEIRYNSEWSMPLGADGMIKLASRYTV 160

Query: 151 NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGI 210
            RML  E    R +    +S  EF Y ++Q YD V L    +  L++GG+DQ  N++ G 
Sbjct: 161 ARMLEREDFTKRFQGGIPISIHEFLYPLMQGYDSVAL----NADLELGGTDQKFNLLVGR 216

Query: 211 DLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADV 269
           +L ++    +   LT PLL    G  KM K+    + + ++   P + +    +I D   
Sbjct: 217 ELQKQYGQEQQCILTMPLLEGLDGVEKMSKSKGNYVGIGEK---PNDMFGKLMSISD--- 270

Query: 270 VSFAKRLTTLPMSEIDRMAKLQ-----GKEINEAKKIIATEITTMVHGREEAEKAATAAM 324
           V   +    L    +D +A+L+     G+   + K ++A EI    H + +AE+    A+
Sbjct: 271 VLMWRYFELLSFRSLDEIARLRGEAEGGRNPRDFKVMLAQEIVARFHSQADAER----AL 326

Query: 325 ECFDMSIH---SQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINN 381
           E F+          +PT++++   ++ G     L+ +AG   ST+EA R+++   +KI+ 
Sbjct: 327 EDFNHRAKGGVPDDIPTVTLAGAPLAIGQ----LLKQAGLVPSTSEALRNIEQGGVKIDG 382

Query: 382 SIISNEKLQIKLQDF 396
           + +S++ L++   +F
Sbjct: 383 ATVSDKALKVDAGEF 397


>gi|148360777|ref|YP_001251984.1| tyrosyl tRNA synthetase [Legionella pneumophila str. Corby]
 gi|296106156|ref|YP_003617856.1| tyrosyl-tRNA synthetase [Legionella pneumophila 2300/99 Alcoy]
 gi|148282550|gb|ABQ56638.1| tyrosyl tRNA synthetase [Legionella pneumophila str. Corby]
 gi|295648057|gb|ADG23904.1| tyrosyl-tRNA synthetase [Legionella pneumophila 2300/99 Alcoy]
          Length = 401

 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 95/356 (26%), Positives = 169/356 (47%), Gaps = 18/356 (5%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   L  L   Q+ GH+ I L+G  T++IGDP+ ++ +R  +  + + 
Sbjct: 39  GFDPTAPDLHLGHTVLLNKLRQFQQFGHEVIFLIGDFTAMIGDPTGKNVTRMPLSQETVL 98

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           EN +  +     F      KT      N  WL     +DL+R + +  +V RML  +   
Sbjct: 99  ENAKTYQ--HQVFKILDPDKTTVAF--NSQWLNKFDAVDLIR-LAATHTVARMLERDDFN 153

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R    Q ++  EF Y +LQ YD V L  +    +++GG+DQ  N++ G +L +      
Sbjct: 154 KRYTTGQPIAIHEFLYPLLQGYDSVALKAD----VELGGTDQKFNLLMGRELQKHYGFEP 209

Query: 221 LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTL 279
              + +PL+    G  KM K+L   I +N+   +P   +    ++ D  +  +   L+  
Sbjct: 210 QVVMMTPLIEGLDGVKKMSKSLDNYIGINE---TPEQMFGKIMSVSDELMWRYIDLLSFK 266

Query: 280 PMSEIDRMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMP 337
              EI ++ +  L+GK   + K   A EI    H + +AE A    +E F      + + 
Sbjct: 267 TGKEIQQLKQSVLEGKNPRDVKIDFAKEIVARFHDQTQAEFAHNKFIERFQKGNIPEDLE 326

Query: 338 TISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL 393
            +S+    ++  + L+ L+ +     ST+E+ R +K  A+K++   IS+  L++ +
Sbjct: 327 ELSLV---IAEPIALVQLLKQIDLTASTSESIRMVKQGAVKVDGDKISDPSLKLPI 379


>gi|317478183|ref|ZP_07937351.1| tyrosyl-tRNA synthetase [Bacteroides sp. 4_1_36]
 gi|316905635|gb|EFV27421.1| tyrosyl-tRNA synthetase [Bacteroides sp. 4_1_36]
          Length = 235

 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 74/231 (32%), Positives = 109/231 (47%), Gaps = 17/231 (7%)

Query: 200 SDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQ 259
           SDQWGNI  G +L  R    ++FALTSPL+T A G K GKT SG IWL+   TSPY F+Q
Sbjct: 1   SDQWGNITTGAELIRRTNGGEVFALTSPLITKADGGKFGKTESGNIWLDPRYTSPYKFYQ 60

Query: 260 YWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKKIIATEITTMVHGREEAE 317
           +W N+ D D   + K  T L   EID +         +   +K +A E+T MVH  E+  
Sbjct: 61  FWLNVSDEDAKRYIKIFTALSKEEIDALTAEHDAAPHLRVLQKCLAKEVTIMVHSEEDYN 120

Query: 318 KAATAAMECFDMSIHS--------------QHMPTISISKDEVSRGMGLLTLIV-KAGFA 362
            A  A+   F  +                 + +P   IS+D ++ G+  + L V  A   
Sbjct: 121 AAVDASNILFGNATSDALKKLDEDTLLAVFEGVPQFEISRDALAAGVKAVDLFVDNAAVF 180

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            S  E R+ ++   + +N   ++     I   D      + +  GKKN+ +
Sbjct: 181 ASKGEMRKLVQGGGVSLNKEKLAAFDQVITTADLLDEKYLLVQRGKKNYYL 231


>gi|114331532|ref|YP_747754.1| tyrosyl-tRNA synthetase [Nitrosomonas eutropha C91]
 gi|114308546|gb|ABI59789.1| tyrosyl-tRNA synthetase [Nitrosomonas eutropha C91]
          Length = 406

 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 103/356 (28%), Positives = 167/356 (46%), Gaps = 29/356 (8%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   L  L  LQ+ GH  + L+G  T +IGDPS ++ +R  +  ++I 
Sbjct: 40  GFDPTAPDLHLGHTVLLNKLRQLQELGHHILFLIGDFTGMIGDPSGKNATRPPLTCEQIA 99

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           +N E         +K    +T+ +   N TW+      DL+R + S ++V RML  +   
Sbjct: 100 QNAETYTSQVFKILK--PEQTEVVF--NSTWMDKFSAADLVR-LASTYTVARMLERDDFS 154

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R    + ++  EF Y ++Q YD V L  +    L++GG+DQ  N++ G +L +      
Sbjct: 155 KRYHENRPIAIHEFLYPLVQGYDSVALKTD----LELGGTDQKFNLLVGRELQKHYGQSP 210

Query: 221 LFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDA------DVVSFA 273
              LT PLL    G  KM K+L+  + +N+   SP   +    +I D       +++SF 
Sbjct: 211 QCILTMPLLEGLDGIQKMSKSLNNYVGINE---SPTEMFGKLMSISDTLMWRYIELLSF- 266

Query: 274 KRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS 333
           + L T+   +++  A   G+   + K   A EI    H R     AA  A E FD     
Sbjct: 267 ESLDTIHQWQLEVEA---GRNPRDIKVQFAQEIVARFHSR----TAAIQATEDFDARFRK 319

Query: 334 QHMPTISISKDEVSRGMGLLT--LIVKAGFATSTNEARRHLKSNAIKINNSIISNE 387
             +P     K    +G  L    L+   G   ST+EA R ++   +K+N + +S++
Sbjct: 320 GAIPDDIPEKKLYVQGTELAAPQLLKLTGLTASTSEALRMIEQGGVKLNGNKVSDK 375


>gi|297171491|gb|ADI22491.1| tyrosyl-tRNA synthetase [uncultured gamma proteobacterium
           HF0500_07A21]
          Length = 401

 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 96/356 (26%), Positives = 169/356 (47%), Gaps = 17/356 (4%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G+D TA  LH GH   +  +   Q  GH+ I L+G  T +IGDPS ++ +R  +  +EI
Sbjct: 40  VGFDPTAPDLHLGHTVLINKMRQFQDLGHEIIFLIGDFTGMIGDPSGKNATRPALSPEEI 99

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
            +N    K     F      KT  ++  N  W   +    ++R + S ++V RML  +  
Sbjct: 100 DQNALTYKE--QVFKILDPDKT--IVDFNSRWGNELGAEGMIR-LASRYTVARMLERDDF 154

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
            +R +  Q ++  EF Y ++Q YD V L  +    +++GG+DQ  N++ G +L ++    
Sbjct: 155 STRYRDSQPIAVHEFLYPLMQGYDSVALKAD----VELGGTDQKFNLLVGRELQKQYGLE 210

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               LT PLL    G  KM K+L  ++ + +   SP   +    +I D  +  + + L+ 
Sbjct: 211 PQIVLTVPLLEGLDGVQKMSKSLGNSVGITE---SPVEMYGKLMSISDELMWRYFELLSF 267

Query: 279 LPMSEIDRMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM 336
            P+++I  + +    G    + K  +A EI    H   +A KA  + +  F        +
Sbjct: 268 RPLTDIRGLQEEVAAGANPRDIKFQLAHEIVERFHSPSDAVKAHQSFVSQFQRGEIPDDI 327

Query: 337 PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
             + +  D   + M +  +I  AG A ST+E  R +   A++I+   +++ KL IK
Sbjct: 328 AEVDV--DNQGKDMQVANVIKSAGLAGSTSEVYRLMAQGAVRIDGERVNDRKLTIK 381


>gi|289547924|ref|YP_003472912.1| tyrosyl-tRNA synthetase [Thermocrinis albus DSM 14484]
 gi|289181541|gb|ADC88785.1| tyrosyl-tRNA synthetase [Thermocrinis albus DSM 14484]
          Length = 394

 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 100/370 (27%), Positives = 168/370 (45%), Gaps = 23/370 (6%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH+  L  L   Q  GH+   ++G  T++IGDP+ R+E R  +  +E+ 
Sbjct: 39  GFDPTAPDLHLGHVVLLNKLRQFQDLGHEVYFVIGDFTAMIGDPTGRNEVRPPLSREEVL 98

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           EN +  +     F      KT+ +   N +W+  +    +++ + + ++V RML  +   
Sbjct: 99  ENAKTYE--HQVFKVLDPQKTNVVF--NSSWITPLGTEGIIK-LSAHYTVARMLERDDFS 153

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R K    +   EF Y +LQ YD V L  +    +++GG+DQ  N++ G DL        
Sbjct: 154 RRFKEGIPIYIHEFIYPLLQGYDSVALKAD----VELGGTDQKFNLLVGRDLQRAYGQEP 209

Query: 221 LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTL 279
              +T PLL    G  KM K+    + L ++   P + +    +I D  +  +   LT +
Sbjct: 210 QVCITLPLLVGLDGVRKMSKSYRNYVGLQED---PDSMFGKIMSISDQLMWEYYTLLTDI 266

Query: 280 PMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI 339
              EI  M   +     +AKK +A  I    HG+E A+KA +     F      +  P +
Sbjct: 267 EEEEIKNMK--EKWHPADAKKRLAHYIVERFHGKEAADKALSNFERTFSRKEFPEDAPVL 324

Query: 340 SISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDST 399
            +      +   LL  +   G   S N ARR ++   ++IN   I +   +I++     T
Sbjct: 325 ELPMGYRQKAFELLYSL---GIENSKNSARRVIEGGGLRINGRRIEDPNEEIEV-----T 376

Query: 400 GNIKLSFGKK 409
             ++L  GKK
Sbjct: 377 EELRLQVGKK 386


>gi|258406326|ref|YP_003199068.1| tyrosyl-tRNA synthetase [Desulfohalobium retbaense DSM 5692]
 gi|257798553|gb|ACV69490.1| tyrosyl-tRNA synthetase [Desulfohalobium retbaense DSM 5692]
          Length = 399

 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 100/362 (27%), Positives = 163/362 (45%), Gaps = 36/362 (9%)

Query: 36  VTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMR 95
           +T   G+D TA  LH GH   +  L   Q+ GH  + L+G  T +IGDPS + E+R+ + 
Sbjct: 31  LTIKAGFDPTAPDLHLGHTVLIQKLKHFQELGHNVVFLIGDFTGMIGDPSGKSETRKALT 90

Query: 96  SQEIQENIEKIK-GIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRML 154
            +E++ N E  K  IF    +  T      +  N  W+ S    D +  + S ++V RML
Sbjct: 91  REEVRINAETYKRQIFRILDREKT-----RIAFNAEWMDSFSAADFVH-LCSQYTVARML 144

Query: 155 SFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLG- 213
             +    R +  + +S  EF Y ++Q YD V L  +    +++GG+DQ  N++ G  L  
Sbjct: 145 ERDDFAKRYQANKPISVHEFLYPLVQGYDSVALQAD----VELGGTDQKFNLLMGRTLQR 200

Query: 214 ERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYN---------FWQYWRN 263
           E  +TP++  LT P+L    G  KM K+L   + + +     +           W+Y+  
Sbjct: 201 EYGQTPQVI-LTMPILEGLDGVQKMSKSLGNYVGIEEPAQDMFGKLMSISDELMWRYFEL 259

Query: 264 IDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAA 323
           + D  + + A     +   E+   A         AK+ +A EIT   H   EAEKA    
Sbjct: 260 LSDLSLEAIAALQAQVASGELHPKA---------AKEQLAFEITERFHSTAEAEKAKANF 310

Query: 324 MECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSI 383
              F      + MP I I+ +E S    ++  I  +G   S  E +R  K  A+  +   
Sbjct: 311 ANVFSQHQLPEDMPEIRIAPEEAS----VIATIDHSGLCASRAEIKRLCKQGAVTCDGEK 366

Query: 384 IS 385
           ++
Sbjct: 367 VT 368


>gi|325972882|ref|YP_004249946.1| tyrosyl-tRNA synthetase [Mycoplasma suis str. Illinois]
 gi|325989375|ref|YP_004249074.1| Tyrosyl-tRNA synthetase [Mycoplasma suis KI3806]
 gi|323574460|emb|CBZ40110.1| Tyrosyl-tRNA synthetase [Mycoplasma suis]
 gi|323651484|gb|ADX97566.1| tyrosyl-tRNA synthetase [Mycoplasma suis str. Illinois]
          Length = 358

 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 105/372 (28%), Positives = 186/372 (50%), Gaps = 45/372 (12%)

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           G K + ++G  T+ IGD S+R E R+++ S  IQ N+E+I+  F    K    K++ ++ 
Sbjct: 11  GIKTVIILGDFTTKIGDASWRTEDRKILESSVIQSNLEQIREQF----KVLCPKSEIVL- 65

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
            N T+  +   I+++ ++   F ++ +LS + +  RL ++ SL+  +  Y +LQ++DF  
Sbjct: 66  -NSTFYRNFS-IEMMSDLMKNFKLSTLLSKDFLSVRLSQD-SLTLRDAFYPVLQSFDFYN 122

Query: 187 LAKNYDCRLQMGGSDQWGNIICGID-LGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           LA + +  +QMGG DQWGNI  GI+ + ++  +      T PLLT ++G K GK+    +
Sbjct: 123 LAVDKNVTIQMGGQDQWGNITTGIEFIKKKDNSIPTGGFTIPLLTDSNGVKFGKSGKNTL 182

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPM-SEIDRMAKLQGKEINEAKKIIAT 304
           +LN ++TSPY  +QY+ N+ D  +    K L+     SEID    +      E K  I  
Sbjct: 183 FLNSKLTSPYKVYQYFWNLSDEKL----KELSIFLFDSEIDSYESMTP----ECKSKIIE 234

Query: 305 EITTMVHGREEAEKAATAAMECF---------------DMSIHSQHMPTISISKDEVSRG 349
           ++ + V+ R+ + +A   A E                 D+   S  +P       E S  
Sbjct: 235 KLFSGVY-RDNSFRAIKKASELLFQKNSDIREKVFTEEDLKDLSSVLPFY-----ETSGP 288

Query: 350 MGLLTLIVKAGFATSTNEARRHLK-SNAIKINNSIISNEK--LQIKLQDFDSTGNIKLSF 406
             + T++V  GF++S +E++R ++    +   + +  N K  L  KL    S+    +  
Sbjct: 289 TNISTILVNLGFSSSHSESKRLVELEKCVSCFSYVFKNHKEILDTKLS---SSSYFLIKK 345

Query: 407 GKKNHIICHLCG 418
           G+K + I H  G
Sbjct: 346 GEKEYGIFHYSG 357


>gi|74316477|ref|YP_314217.1| tyrosyl-tRNA synthetase [Thiobacillus denitrificans ATCC 25259]
 gi|115305829|sp|Q3SLJ8|SYY_THIDA RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|74055972|gb|AAZ96412.1| tyrosyl-tRNA synthetase, class Ib [Thiobacillus denitrificans ATCC
           25259]
          Length = 396

 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 95/373 (25%), Positives = 170/373 (45%), Gaps = 22/373 (5%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   L  L   Q  GH+ + L+G  T +IGDP+ ++ +R  +  + + 
Sbjct: 36  GFDPTAPDLHLGHTVLLNKLRQFQVLGHRIVFLIGDFTGMIGDPTGKNATRPPLTREAVA 95

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           EN +  +       K        +  N+E W+  +  + ++R + +  +V RML  +  +
Sbjct: 96  ENAKTYQ---EQVFKVLDPALTEVRFNSE-WMEGLGSVGMIR-LAATHTVARMLERDDFQ 150

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R   ++ ++  EF Y ++Q YD VEL  +    +++GG+DQ  N++ G +L +    P 
Sbjct: 151 KRYSSQKPIAIHEFLYPLIQGYDSVELKAD----VELGGTDQKFNLLMGRELQKHYGQPP 206

Query: 221 LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTL 279
              LT PLL    G  KM K+L   I +N+   +P   +    +I DA +  +   L+  
Sbjct: 207 QCILTMPLLEGTDGVNKMSKSLGNYIGINE---APGQIFGKLMSISDALMWRYIDLLSFE 263

Query: 280 PMSEID--RMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMP 337
            ++ I+  R     G    E K   A EI    HG + A  A       F   +    MP
Sbjct: 264 SIARIEGWRSDVAAGLNPREVKVAFAQEIVGRFHGDKAARDAVAEFEARFQRGVLPDDMP 323

Query: 338 TISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
            + +    +  G+ +  L+ +AG  +ST++A R +    ++++      E++  K Q   
Sbjct: 324 EVDLHG--IDGGLPVPQLLKQAGLVSSTSDAIRQIAGGGVRLD-----GERVTDKGQSVP 376

Query: 398 STGNIKLSFGKKN 410
           +   +    GK+ 
Sbjct: 377 AGATVVAQVGKRK 389


>gi|156186012|gb|ABU55324.1| tyrosyl-tRNA synthetase [Callosobruchus chinensis]
          Length = 104

 Score =  118 bits (296), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 53/102 (51%), Positives = 75/102 (73%)

Query: 82  GDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLL 141
           GDPSF+D++R ++  + I +N   I+ I    + +   KT A+++NN  WL +IKYID L
Sbjct: 3   GDPSFKDKARSILPVENINQNTSSIRRILEKMMSFXDSKTGAMIVNNXDWLDNIKYIDFL 62

Query: 142 REIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            +IG++FSVNRMLSF+SV++RL REQ+L FLE NYM+ QAYD
Sbjct: 63  GDIGAYFSVNRMLSFDSVKTRLDREQTLXFLEXNYMLXQAYD 104


>gi|315646148|ref|ZP_07899268.1| tyrosyl-tRNA synthetase [Paenibacillus vortex V453]
 gi|315278347|gb|EFU41663.1| tyrosyl-tRNA synthetase [Paenibacillus vortex V453]
          Length = 417

 Score =  118 bits (296), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 92/363 (25%), Positives = 173/363 (47%), Gaps = 17/363 (4%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D +A  LH GH   L  L   Q+ GH+   ++G  T  IGDP+ + E+R+ +  +E+
Sbjct: 52  LGMDPSAPDLHVGHTVVLQKLRQFQELGHQVQLIIGDFTGRIGDPTGKSETRKQLSEEEV 111

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           + + E  K      +     K    +  N  WL  + + +++  + +  +V RML  +  
Sbjct: 112 KHHAETYKKQIYKVLNPDKTK----IYYNSEWLAPMTFAEVV-SLSAKVTVARMLERDDF 166

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R +    +S  EF Y ++Q  D V L  +    +++GG+DQ  N++ G  L +   T 
Sbjct: 167 TKRYQNGLPISIHEFFYPLMQGMDSVALKTD----VELGGTDQKFNLLMGRTLQKEYGTE 222

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
              A+T P++    G  KM K+L   I +++E   P   +    ++ D  ++ + +  T 
Sbjct: 223 AQVAITMPIIEGLDGVQKMSKSLGNYIGIDEE---PNEIYGKTMSVPDELMLKYYRLATD 279

Query: 279 LPMSEIDRMAK-LQGKEIN--EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQH 335
               +++++   LQ   ++  +AK  +A  +  M HG E A+ A    +  F      + 
Sbjct: 280 ARSEDLNKLETGLQDGSVHPRDAKMGLAHTLVRMYHGMEAADAAQQHFVTVFQQHALPEE 339

Query: 336 MPTISISKDEVSRG-MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
           +    ++++ +  G +GL+ L+ + GFA S  EARR ++  A+K N    ++   +I  Q
Sbjct: 340 IEDFVVAEETLENGKIGLIKLLTQLGFAASNAEARRSIQQGAVKWNEEKWTDIYGEITPQ 399

Query: 395 DFD 397
           D D
Sbjct: 400 DGD 402


>gi|297180578|gb|ADI16789.1| tyrosyl-tRNA synthetase [uncultured gamma proteobacterium
           HF0010_11K06]
          Length = 407

 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 109/395 (27%), Positives = 185/395 (46%), Gaps = 41/395 (10%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           I+ E+G   +++  + L I           G+D TA  LH GH   +  L   Q  GH+ 
Sbjct: 19  IIPEKGLEKKLNKNKPLIIKA---------GFDPTAPDLHLGHTVLINKLKQFQDLGHQV 69

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIK-GIFSSFIKYGTGKTDALMLNNE 129
           + L+G  T +IGDPS   E+R ++  +++++N E  +  IF    K  T      +  N 
Sbjct: 70  VFLIGDFTGMIGDPSGVSETRPILTVEQLKKNSETYQEQIFKILDKKKTK-----IEFNS 124

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
           TW   +   +L+  + S  +V RML  +    R K  + +S  EF Y ++Q YD  EL  
Sbjct: 125 TWFKKMTSAELIN-LSSKMTVARMLERDDFSKRYKGNKPISIHEFIYPLVQGYDSFELKS 183

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLN 248
           +    +++GG+DQ  N++ G D+ +     +   +T P+L    G  KM K+L+  I L 
Sbjct: 184 D----IELGGTDQKFNLLVGRDIQKSFGMEEQIIMTLPILEGTDGVKKMSKSLNNYIGLK 239

Query: 249 KEMTSPYNFWQYWRNIDDA------DVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKII 302
           +   SP + +    +I D       D++SF    +++ + E+ +  + QG    EAKK++
Sbjct: 240 E---SPNDMFGKIMSISDDLMWRYFDLLSFK---SSVEIKELKKKTE-QGLNPMEAKKML 292

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFA 362
           + EI T  HG E+A  A       F        +  I +S    S  + +L L+      
Sbjct: 293 SAEIVTRFHGEEKALLAEKEFTNRFSKGNDPAEIKLIKLSMKASS--ISVLDLLSSEELG 350

Query: 363 -----TSTNEARRHLKSNAIKINNSIISNEKLQIK 392
                 S +EARR +   A+KI+   IS+E + ++
Sbjct: 351 DHKLCKSKSEARRMIAQGAVKIDGKKISDEAISVQ 385


>gi|289207590|ref|YP_003459656.1| tyrosyl-tRNA synthetase [Thioalkalivibrio sp. K90mix]
 gi|288943221|gb|ADC70920.1| tyrosyl-tRNA synthetase [Thioalkalivibrio sp. K90mix]
          Length = 401

 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 92/350 (26%), Positives = 162/350 (46%), Gaps = 18/350 (5%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   +  L  LQ  GH  I L+G  T  IGDPS ++ +R  + S++I+
Sbjct: 38  GFDPTAPDLHLGHTVLINKLRQLQDLGHHIIFLIGDFTGRIGDPSGKNATRPPLSSEDIE 97

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
            N    +     F      +T+     N TW+  +    ++ ++ S  +V RML  +   
Sbjct: 98  RNAATYRD--QVFRILDPDRTEVAF--NSTWMEPLGAAGMV-QLASRHTVARMLERDDFH 152

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R +  Q ++  EF Y ++Q YD V L  +    +++GG+DQ  N++ G +L ++   P 
Sbjct: 153 KRYRDHQPIAIHEFLYPLIQGYDSVALKAD----VELGGTDQKFNLLVGRELQKQEGMPP 208

Query: 221 LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTL 279
              LT P+L    G  KM K+L   I +     +P + +    +I D  +  + + L+  
Sbjct: 209 QVILTMPILEGLDGVQKMSKSLGNYIAVQ---DAPDDMFGKLMSISDELMWRYYELLSLR 265

Query: 280 PMSEIDRMAKLQGKEINEAKKI---IATEITTMVHGREEAEKAATAAMECFDMSIHSQHM 336
           PM E+    +         + I   +  E+    HG    E+A  A +E F      + +
Sbjct: 266 PMGEVRAARRAAEAGERNPRDIKFELGRELVDRFHGPGRGEQAQAAFVERFQKHALPEEL 325

Query: 337 PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISN 386
           P ++++    + G+ L   +  AG   ST+E R  ++  A+++N   I +
Sbjct: 326 PEVTVAVP--AEGLLLPNALKSAGLVASTSEGRSMIRQGAVRLNGERIED 373


>gi|52840810|ref|YP_094609.1| tyrosyl-tRNA synthetase [Legionella pneumophila subsp. pneumophila
           str. Philadelphia 1]
 gi|52627921|gb|AAU26662.1| tyrosyl tRNA synthetase [Legionella pneumophila subsp. pneumophila
           str. Philadelphia 1]
          Length = 423

 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 95/356 (26%), Positives = 168/356 (47%), Gaps = 18/356 (5%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   L  L   Q+ GH+ I L+G  T++IGDP+ ++ +R  +  + + 
Sbjct: 61  GFDPTAPDLHLGHTVLLNKLRQFQQFGHEVIFLIGDFTAMIGDPTGKNVTRMPLSQETVL 120

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           EN +  +     F      KT      N  WL     +DL+R + +  +V RML  +   
Sbjct: 121 ENAKTYQ--HQVFKILDPDKTTVAF--NSQWLNKFNAVDLIR-LAATHTVARMLERDDFN 175

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R    Q ++  EF Y +LQ YD V L  +    +++GG+DQ  N++ G +L +      
Sbjct: 176 KRYTTGQPIAIHEFLYPLLQGYDSVALKAD----VELGGTDQKFNLLMGRELQKHYGFEP 231

Query: 221 LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTL 279
              + +PL+    G  KM K+L   I +N+   +P   +    ++ D  +  +   L+  
Sbjct: 232 QVVMMTPLIEGLDGVKKMSKSLDNYIGINE---TPEQMFGKIMSVSDELMWRYIDLLSFK 288

Query: 280 PMSEIDRMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMP 337
              EI ++ +  L+GK   + K   A EI    H + +AE A    +E F      + + 
Sbjct: 289 TGKEIQQLKQSVLEGKNPRDVKIDFAKEIVARFHDQTQAEFAHNKFIERFQKGNIPEDLE 348

Query: 338 TISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL 393
            +S+    ++  + L  L+ +     ST+E+ R +K  A+K++   IS+  L++ +
Sbjct: 349 ELSLV---IAEPIALAQLLKQIDLTASTSESIRMVKQGAVKVDGDKISDPSLKLPI 401


>gi|291295232|ref|YP_003506630.1| tyrosyl-tRNA synthetase [Meiothermus ruber DSM 1279]
 gi|290470191|gb|ADD27610.1| tyrosyl-tRNA synthetase [Meiothermus ruber DSM 1279]
          Length = 426

 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 100/410 (24%), Positives = 178/410 (43%), Gaps = 47/410 (11%)

Query: 16  GFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMG 75
           G +  I     L  L S   +T  +G D T   +H GH   L  +   Q+ GHK + ++G
Sbjct: 13  GAVEIIPQEDLLKKLHSGKKLTVKLGLDPTRPDIHIGHAVVLRKMRQFQELGHKVVLIIG 72

Query: 76  GGTSIIGDPSFRDESRRMMRSQEIQEN----IEKIKGIFSSFIKYGTGKTDALMLNNETW 131
             T++IGDPS R ++R  +  +E + N    +E++  I  +     T      +  N  W
Sbjct: 73  DFTAMIGDPSGRSKTRPPLTLEETRANAKSYVEQVGKILIT-----TDPARFELRYNSEW 127

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L ++ + +++R + S  +V +ML  E  + R      +S  EF Y   Q YD V +A   
Sbjct: 128 LENLGFKEVIR-LTSLLTVAQMLEREDFKKRYTEGVPISIHEFLYPFAQGYDSVPIA--- 183

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
            C ++MGG+DQ  N++ G ++       K  A   PLL    G KM K+    I + +E 
Sbjct: 184 -CDVEMGGTDQKFNLLVGREVQAAYGLEKQVAFLMPLLVGGDGQKMSKSYDNYIGITEE- 241

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTM-- 309
             P   ++    ++D  + ++ +  T L   EI  + + QG  +  A +++A  +T    
Sbjct: 242 --PSEIFRKLMKVEDPYLQTYFELCTDLAPEEIKEVLE-QGGPVG-AHRVLARLLTGAYA 297

Query: 310 ---------------------VHGREEAEKAATAAMECFDMSIH----SQHMPTISISKD 344
                                 HG ++         E     I      + MP + +   
Sbjct: 298 QPLIPARLDKAWYESLGYSWEAHGHDQGGAPVVRQAEARYYEIAHGGIPEQMPEVRLQAS 357

Query: 345 EVSRG-MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL 393
           E+  G + +L L   AG   S  EARR ++   ++++  ++++ KL++ L
Sbjct: 358 ELLEGRIAVLKLFTLAGLTASNGEARRLIEQKGLRLDGQVLTDPKLEVVL 407


>gi|326561712|gb|EGE12047.1| tyrosyl-tRNA synthetase [Moraxella catarrhalis 7169]
          Length = 406

 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 92/350 (26%), Positives = 167/350 (47%), Gaps = 18/350 (5%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA+ LH GH   L  L   Q  GH+ + L+G  T+ IGDPS ++ +R  +   E+
Sbjct: 41  LGMDPTAADLHLGHTVVLNKLRHFQDLGHEVLFLIGDYTARIGDPSGKNATRPPLTEAEV 100

Query: 100 QENIEK-IKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
           + N +   K +F    K  T      ++ N  W   +   D++ ++ S  +V+RML  + 
Sbjct: 101 KANAQTYAKQVFKILDKDKTK-----IVFNSDWFGKMSAGDMI-QLASQVTVSRMLERDD 154

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
              R   +  ++  EF Y ++Q YD + L    D  +++GG+DQ  N++ G  L  R   
Sbjct: 155 FAKRYGNQTPIAIHEFLYPLVQGYDSIAL----DADVELGGTDQTFNLLMGRTLQGRYDK 210

Query: 219 PKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT 277
                +T P+L    G  KM K+L   I +N      Y   Q   ++ D  +  + + L+
Sbjct: 211 EPQVCITMPILEGLDGVQKMSKSLGNYIGINDPAGVMY---QKILSMPDTLIARYFELLS 267

Query: 278 TLPMSEIDRMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQH 335
             PMSE++ +      G+   E K+I+A E+    H +E A+ A  +A            
Sbjct: 268 FKPMSEVNALLDDMKNGRNPQEIKRILALELIERFHDKESADNAHKSAGNRLADGELPVD 327

Query: 336 MPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIIS 385
           +P +S+S +   + + +  ++ +AG A ++ +A+  L   A+K++  ++ 
Sbjct: 328 LPEVSLSLNGQDK-LFITQVLNQAGLAKNSAQAKDMLSRGAVKVDGQVVD 376


>gi|297170312|gb|ADI21348.1| tyrosyl-tRNA synthetase [uncultured gamma proteobacterium
           HF0010_10D20]
          Length = 404

 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 103/396 (26%), Positives = 174/396 (43%), Gaps = 51/396 (12%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D T++ LH GH   +  L   Q  GH  I L+G  T +IGDPS  +E+R  +  +++ 
Sbjct: 40  GFDPTSADLHLGHTVLINKLKAFQDLGHTVIFLIGDFTGLIGDPSGVNETRPNIDEKKLA 99

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           EN    K       K    K   +  N+ +W   +K  + +R + S  +V RML  +  +
Sbjct: 100 EN---SKTYADQVFKILDKKKTKIKFNS-SWFKKMKLDEFIR-LSSIMTVARMLERDDFK 154

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R +  + +S  EF Y ++Q +D   L       +++GG+DQ  N++ G ++ +     +
Sbjct: 155 KRYENNKPISLHEFLYPLVQGFDSYALK----ADIELGGTDQKFNLLVGREVQKHFGQDE 210

Query: 221 LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYN---------FWQYWRNIDDADVV 270
              +T PLL    G  KM K+L+  I LN E    +           W+Y+      D++
Sbjct: 211 QVTITVPLLEGLDGVKKMSKSLNNYIALNDEPNEMFGKIMSISDNLMWRYF------DLL 264

Query: 271 SFAKRLTTLPMSEIDRMAKLQGKEINEA-----KKIIATEITTMVHGREEAEKAATAAME 325
           SF            D +A  + K  N       KK +ATEI    + ++ +E A  A   
Sbjct: 265 SFRSN---------DEIASFRDKVKNGENPMTFKKKLATEIVERFYDKKSSENAEIAFTN 315

Query: 326 CFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG----FATSTNEARRHLKSNAIKINN 381
            F   +    +P   I++   +  + ++ L+        F  S +E RR +K + IK+NN
Sbjct: 316 VFSNKLEPSEVPIFEINE---TSSISIVELLTHEDLGNEFIQSKSECRRLIKQSGIKMNN 372

Query: 382 SIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
             + N  L I L + +         GK+ H+   L 
Sbjct: 373 KKVENPDLLINLGEENY-----FQIGKRKHLKIKLV 403


>gi|270159220|ref|ZP_06187876.1| tyrosyl-tRNA synthetase [Legionella longbeachae D-4968]
 gi|289165954|ref|YP_003456092.1| tyrosyl-tRNA synthetase [Legionella longbeachae NSW150]
 gi|269987559|gb|EEZ93814.1| tyrosyl-tRNA synthetase [Legionella longbeachae D-4968]
 gi|288859127|emb|CBJ13056.1| tyrosyl-tRNA synthetase [Legionella longbeachae NSW150]
          Length = 398

 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 99/360 (27%), Positives = 168/360 (46%), Gaps = 26/360 (7%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   L  L   Q+ GH+ I L+G  T++IGDP+ ++ +R  +  + + 
Sbjct: 39  GFDPTAPDLHLGHTVLLNKLRQFQQFGHEVIFLIGDFTAMIGDPTGKNVTRLPLSQETVL 98

Query: 101 ENI----EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSF 156
           EN     E++  I          KT      N  WL     +DL+R + +  +V RML  
Sbjct: 99  ENAKTYQEQVFKILDPL------KTRVAF--NSQWLAQFSAVDLIR-LAATHTVARMLER 149

Query: 157 ESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL 216
           +    R    Q ++  EF Y +LQ YD V L  +    +++GGSDQ  N++ G +L +  
Sbjct: 150 DDFNKRYISNQPIAIHEFLYPLLQGYDSVALKAD----VELGGSDQKFNLLMGRELQKHY 205

Query: 217 KTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKR 275
                  + +PL+    G  KM K+L   I +N+     +       +I D  +  +   
Sbjct: 206 GFEPQVVMMTPLIEGLDGVKKMSKSLDNYIGINEPAAEMFG---KIMSISDELMWRYINL 262

Query: 276 LTTLPMSEIDRMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS 333
           L+    +EI  +    LQG    + K   A EI T  H +++AEKA    +E F   +  
Sbjct: 263 LSFKTGNEIAALKNSVLQGANPRDIKIEFAKEIVTRFHDQQQAEKAHIDFIERFQKGVIP 322

Query: 334 QHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL 393
           + +    ++   +   + L  L+ +A    ST+E+ R +K  A+KI+ + + +  L++ L
Sbjct: 323 EDLEEQIVT---LQNSLSLAQLLKQANLTQSTSESMRLIKQGAVKIDGNKVEDPGLELAL 379


>gi|307609371|emb|CBW98858.1| tyrosyl-tRNA synthetase [Legionella pneumophila 130b]
          Length = 401

 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 95/356 (26%), Positives = 168/356 (47%), Gaps = 18/356 (5%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   L  L   Q+ GH+ I L+G  T++IGDP+ ++ +R  +  + + 
Sbjct: 39  GFDPTAPDLHLGHTVLLNKLRQFQQFGHEVIFLIGDFTAMIGDPTGKNVTRMPLSQETVL 98

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           EN +  +     F      KT      N  WL     +DL+R + +  +V RML  +   
Sbjct: 99  ENAKTYQ--HQVFKILDPDKTTVAF--NSQWLNKFNAVDLIR-LAATHTVARMLERDDFN 153

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R    Q ++  EF Y +LQ YD V L  +    +++GG+DQ  N++ G +L +      
Sbjct: 154 KRYTTGQPIAIHEFLYPLLQGYDSVALKAD----VELGGTDQKFNLLMGRELQKHYGFEP 209

Query: 221 LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTL 279
              + +PL+    G  KM K+L   I +N+   +P   +    ++ D  +  +   L+  
Sbjct: 210 QVVMMTPLIEGLDGVKKMSKSLDNYIGINE---TPEQMFGKIMSVSDELMWRYIDLLSFK 266

Query: 280 PMSEIDRMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMP 337
              EI ++ +  L+GK   + K   A EI    H + +AE A    +E F      + + 
Sbjct: 267 TGKEIQQLKQSVLEGKNPRDVKIDFAKEIVARFHDQTQAEFAHNKFIERFQKGNIPEDLE 326

Query: 338 TISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL 393
            +S+    ++  + L  L+ +     ST+E+ R +K  A+K++   IS+  L++ +
Sbjct: 327 ELSLV---IAEPIALAQLLKQIDLTASTSESIRMVKQGAVKVDGDKISDPSLKLPI 379


>gi|115305808|sp|Q5ZY07|SYY_LEGPH RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
          Length = 401

 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 95/356 (26%), Positives = 168/356 (47%), Gaps = 18/356 (5%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   L  L   Q+ GH+ I L+G  T++IGDP+ ++ +R  +  + + 
Sbjct: 39  GFDPTAPDLHLGHTVLLNKLRQFQQFGHEVIFLIGDFTAMIGDPTGKNVTRMPLSQETVL 98

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           EN +  +     F      KT      N  WL     +DL+R + +  +V RML  +   
Sbjct: 99  ENAKTYQ--HQVFKILDPDKTTVAF--NSQWLNKFNAVDLIR-LAATHTVARMLERDDFN 153

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R    Q ++  EF Y +LQ YD V L  +    +++GG+DQ  N++ G +L +      
Sbjct: 154 KRYTTGQPIAIHEFLYPLLQGYDSVALKAD----VELGGTDQKFNLLMGRELQKHYGFEP 209

Query: 221 LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTL 279
              + +PL+    G  KM K+L   I +N+   +P   +    ++ D  +  +   L+  
Sbjct: 210 QVVMMTPLIEGLDGVKKMSKSLDNYIGINE---TPEQMFGKIMSVSDELMWRYIDLLSFK 266

Query: 280 PMSEIDRMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMP 337
              EI ++ +  L+GK   + K   A EI    H + +AE A    +E F      + + 
Sbjct: 267 TGKEIQQLKQSVLEGKNPRDVKIDFAKEIVARFHDQTQAEFAHNKFIERFQKGNIPEDLE 326

Query: 338 TISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL 393
            +S+    ++  + L  L+ +     ST+E+ R +K  A+K++   IS+  L++ +
Sbjct: 327 ELSLV---IAEPIALAQLLKQIDLTASTSESIRMVKQGAVKVDGDKISDPSLKLPI 379


>gi|86609945|ref|YP_478707.1| tyrosyl-tRNA synthetase [Synechococcus sp. JA-2-3B'a(2-13)]
 gi|115305824|sp|Q2JIV0|SYY_SYNJB RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|86558487|gb|ABD03444.1| tyrosyl-tRNA synthetase [Synechococcus sp. JA-2-3B'a(2-13)]
          Length = 413

 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 93/354 (26%), Positives = 166/354 (46%), Gaps = 21/354 (5%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D T   LH GH   L  L   Q  GH  I L+G  T+++GDP+ + E+R  +   E+
Sbjct: 51  LGIDPTRPDLHLGHSVVLRKLRQFQDAGHVAILLIGDFTALVGDPTGQSEARPRLTPAEV 110

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           +EN           + + T     +  N+E WL  +   +L+ E+ +  +V +ML+ E  
Sbjct: 111 EENARTYLEQAGKILDFETPGRLEVRRNSE-WLAHLTLSELI-ELQAQMTVGQMLAKEDF 168

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R +    +   EF Y +LQ YD V LA +    +++GG+DQ  N++ G DL       
Sbjct: 169 AQRYQAGTPVYLHEFLYPLLQGYDSVALAAD----VELGGTDQRFNLLTGRDLQIWKGQA 224

Query: 220 KLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
             F LT PLL    G  KM K+ +  + L ++   P   +     + D  V  + + LT+
Sbjct: 225 PQFCLTVPLLEGLDGYQKMSKSKNNYVGLTED---PLTMYSKLEKVPDHLVERYFELLTS 281

Query: 279 LPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQ--HM 336
           +P++E+        ++  + + ++A  +    H    AE+A   A       I ++   +
Sbjct: 282 VPLAELP-------QDPRQRQILLAKTLVAQFHSPAAAEEAQRTAQALVLDGILAETGSI 334

Query: 337 PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQ 390
           PT +I  D +S  + L  ++ + G   S  EARR ++  A++++   + +  L+
Sbjct: 335 PTFAI--DGLSYPVKLSYILRECGLCKSAAEARRQIQGGAVRLDGQKVEDPDLE 386


>gi|325118084|emb|CBZ53635.1| putative tyrosyl-tRNA synthetase [Neospora caninum Liverpool]
          Length = 948

 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 80/280 (28%), Positives = 118/280 (42%), Gaps = 69/280 (24%)

Query: 102 NIEKIKGIFSSFIKYGTGKTD-ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           ++    G F       T K   A ++ N  WL  +  +D L E G++ S+ R+LS  SV 
Sbjct: 371 DVSDPSGGFPLPASPATAKPPPATIVENRAWLGGLSSLDFLTEFGAYLSLPRLLSRSSVE 430

Query: 161 SRL-----------------------KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQM 197
             L                         + + SF    Y +LQA D+  L +      Q+
Sbjct: 431 ETLGPCLPARNTPTRSGDAGAQPQKAASKANFSFASLAYSVLQAVDWSFLRRRLGVVGQV 490

Query: 198 GGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA------------- 244
           GG DQWGNI  G++L  R    +LF +T+PLL   SG KMGK+ S               
Sbjct: 491 GGGDQWGNIATGLELARRRDNARLFGITTPLLLHRSGVKMGKSGSPGGTGTRTGTDSAFR 550

Query: 245 ----------------------------IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRL 276
                                       +WL K++T P  FWQ+WRN+DD DV    +  
Sbjct: 551 RGDEGEGGRVDESRRGHSTLPKSPGGKTVWLRKDLTPPVEFWQHWRNVDDGDVRRLLRWF 610

Query: 277 TTLPMSEIDRMAK----LQGKEINEAKKIIATEITTMVHG 312
           T L + EID + +       + +N  K+++A  +TT+VHG
Sbjct: 611 TLLSVPEIDALEEDTRHCGERGLNYLKEVLADHVTTLVHG 650



 Score = 37.7 bits (86), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 13/84 (15%)

Query: 28  DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH-KPISLMGGGTSIIGDPSF 86
           D  C Q  ++ Y+G DLT  SLH GHL  L+LL  LQ     +P+ L+G  T+++GDP+ 
Sbjct: 220 DASCDQ-PLSFYLGIDLTGRSLHIGHLLPLLLLRRLQCLQLVRPVILLGTATTLVGDPTG 278

Query: 87  RDESRRMMRSQEIQENIEKIKGIF 110
           +            Q N  K + +F
Sbjct: 279 K-----------FQHNFVKPRTVF 291


>gi|121609599|ref|YP_997406.1| tyrosyl-tRNA synthetase [Verminephrobacter eiseniae EF01-2]
 gi|121554239|gb|ABM58388.1| tyrosyl-tRNA synthetase [Verminephrobacter eiseniae EF01-2]
          Length = 410

 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 107/386 (27%), Positives = 175/386 (45%), Gaps = 52/386 (13%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  L  LQ  GH+ I L+G  TS+IGDPS R+ +R  +  ++I
Sbjct: 53  LGLDPTAPDIHLGHTVVLNKLRQLQDLGHQVIFLIGDFTSLIGDPSGRNHTRPALTPEQI 112

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           Q N E      S  +     +T+  +  N  W   +    ++R + + ++V RM+  E  
Sbjct: 113 QANAETYYRQASLVLD--PARTE--IRYNSEWSEPLGAQGMIR-LAAMYTVARMMEREDF 167

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R    QS+S  EF Y ++Q YD V L  +    L++GG+DQ  N++ G  L       
Sbjct: 168 HKRYTTGQSISVHEFLYPLMQGYDSVALKSD----LELGGTDQKFNLLMGRHLQHEHGQE 223

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYN---------FWQY-----WRNI 264
               LT PLL    G  KM K+ +  I + +   + Y           W +     WR++
Sbjct: 224 PQCVLTMPLLVGLDGVDKMSKSKNNYIAITESANTMYAKLLSIPDTLMWDWYPLLSWRSL 283

Query: 265 DDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAM 324
             A + +    +               G+   +AK ++A EIT   HG   A+ A     
Sbjct: 284 --AGIAALKAEVAG-------------GRNPKDAKVLLAKEITARFHGAAAADAAEQ--- 325

Query: 325 ECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSI 383
              D  + SQ     +I+   +S   +G+  L+ +AG A ST+EA R +  N ++++ S+
Sbjct: 326 ---DFIVRSQGGVPDAIAALTLSGAPLGIGVLLRQAGLAPSTSEAHRLIDGNGVRVDGSL 382

Query: 384 ISNEKLQIKLQDFDSTGNIKLSFGKK 409
           +S++ L++        G   L  GK+
Sbjct: 383 VSDKGLKL------GAGTYVLQVGKR 402


>gi|54293559|ref|YP_125974.1| tyrosyl-tRNA synthetase [Legionella pneumophila str. Lens]
 gi|81369183|sp|Q5WYX4|SYY_LEGPL RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|53753391|emb|CAH14844.1| tyrosyl-tRNA synthetase [Legionella pneumophila str. Lens]
          Length = 401

 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 101/364 (27%), Positives = 170/364 (46%), Gaps = 34/364 (9%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   L  L   Q+ GH+ I L+G  T++IGDP+ ++ +R  +  + + 
Sbjct: 39  GFDPTAPDLHLGHTVLLNKLRQFQQFGHEVIFLIGDFTAMIGDPTGKNVTRMPLSQETVL 98

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           EN +  +     F      KT      N  WL     +DL+R + +  +V RML  +   
Sbjct: 99  ENAKTYQ--HQVFKILDPDKTTVAF--NSQWLNKFNAVDLIR-LAATHTVARMLERDDFN 153

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R    Q ++  EF Y +LQ YD V L  +    +++GG+DQ  N++ G +L +      
Sbjct: 154 KRYTTGQPIAIHEFLYPLLQGYDSVALKAD----VELGGTDQKFNLLMGRELQKHYGFEP 209

Query: 221 LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQ--------YWRNIDDADVVS 271
              + +PL+    G  KM K+L   I +N+  TS   F +         WR I   D++S
Sbjct: 210 QVVMMTPLIEGLDGVKKMSKSLDNYIGINE--TSEQMFGKIMSVSDELMWRYI---DLLS 264

Query: 272 F--AKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDM 329
           F   K +  L      + + L+GK   + K   A EI    H + +AE A    +E F  
Sbjct: 265 FKTGKEIQQL------KQSVLEGKNPRDVKIDFAKEIVARFHDQTQAEFAHNKFIERFQK 318

Query: 330 SIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKL 389
               + +  +S+    ++  + L  L+ +     ST+E+ R +K  A+K++   IS+  L
Sbjct: 319 GNIPEDLEELSLV---IAEPIALAQLLKQIDLTASTSESIRMVKQGAVKVDGDKISDPSL 375

Query: 390 QIKL 393
           ++ +
Sbjct: 376 KLPI 379


>gi|297182117|gb|ADI18290.1| tyrosyl-tRNA synthetase [uncultured Chromatiales bacterium
           HF0200_41F04]
          Length = 398

 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 97/364 (26%), Positives = 172/364 (47%), Gaps = 33/364 (9%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   +  +   Q  GH+ I L+G  T +IGDP+ ++ +R  +  +E++
Sbjct: 36  GFDPTAPDLHLGHTVLINKMRQFQDIGHEIIFLIGDFTGMIGDPTGKNATRPPLTPKEVK 95

Query: 101 ENIEK-IKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
            N +   + +F       T      ++ N  W+  +   DL+  I S  +V RML  +  
Sbjct: 96  ANAQTYTEQVFKILDPVKTK-----VVFNSQWMGVMDPADLV-GIASKHTVARMLERDDF 149

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
           + R    Q ++  EF Y ++Q YD V L    +  +++GG+DQ  N++ G  L +     
Sbjct: 150 QKRYAAGQPIAIHEFLYPLIQGYDSVAL----EADIELGGTDQKFNLLVGRQLQQAYGQA 205

Query: 220 KLFALTSPLLTTAS-GTKMGKTLSGAIWLNKEMTSPYN---------FWQYWRNIDDADV 269
               LT PLL   S G KM K+L+  I + +  +  +           W+Y+      ++
Sbjct: 206 PQVVLTMPLLEGISGGDKMSKSLNNYIGITEPASEMFGKLMSISDDLMWKYF------EL 259

Query: 270 VSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDM 329
           VS ++ L  +     D  A   G+   E K  +A EI    HG   A  A  A  + +  
Sbjct: 260 VS-SRSLRHIEKLRADTRA---GRNPKEVKVELAVEIVGRFHGTASANMAFQAFDQRYVR 315

Query: 330 SIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKL 389
                 MP ++++    + G+ L  ++  AG  +ST+E+RR ++  A++I+ + I + + 
Sbjct: 316 GQLPDDMPEVTVAVG--TEGLPLANVLKVAGLTSSTSESRRMVEQGAVRIDGAKIDDARQ 373

Query: 390 QIKL 393
           +IK+
Sbjct: 374 RIKV 377


>gi|261491655|ref|ZP_05988237.1| tyrosyl-tRNA synthetase [Mannheimia haemolytica serotype A2 str.
           BOVINE]
 gi|261494226|ref|ZP_05990726.1| tyrosyl-tRNA synthetase [Mannheimia haemolytica serotype A2 str.
           OVINE]
 gi|261310129|gb|EEY11332.1| tyrosyl-tRNA synthetase [Mannheimia haemolytica serotype A2 str.
           OVINE]
 gi|261312670|gb|EEY13791.1| tyrosyl-tRNA synthetase [Mannheimia haemolytica serotype A2 str.
           BOVINE]
          Length = 396

 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 103/382 (26%), Positives = 178/382 (46%), Gaps = 29/382 (7%)

Query: 10  SILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
           +I SE   I ++   R L I          +G D TA  +H GH   L  L   Q+ GH+
Sbjct: 18  NIYSEEDLITKLKENRPLRI---------KLGADPTAPDIHLGHTVVLNKLRQFQQFGHE 68

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
              L+G  T ++GDPS ++ +R  +  +++  N E  K       K    +   ++ N+E
Sbjct: 69  VYFLIGDFTGMVGDPSGKNSTRPPLSREDVLRNAETYK---EQIFKILDPQKTKIVFNSE 125

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
            WL  +    ++R + S ++V RML  E  ++R   +Q ++  EF Y +LQ +D VEL  
Sbjct: 126 -WLGKLGTEGMIR-LASNYTVARMLEREDFKNRFTNQQPIAIHEFIYPLLQGHDSVELKA 183

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLN 248
           +    +++GG+DQ  N++ G +L +        A+T PLL    G  KM K+L   I + 
Sbjct: 184 D----VELGGTDQTFNLLVGRELQKSAGQKPQVAMTLPLLVGLDGEKKMSKSLGNYIGVT 239

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM-AKLQ-GKEINEAKKIIATEI 306
           +   +P   +    +I D  +  +   L+  P+ EI ++ A ++ GK   + K ++A EI
Sbjct: 240 E---APSEMFGKIMSISDDLMWDWYNLLSFRPLDEIAQLKADVENGKNPRDVKILLAKEI 296

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
               H    A+ A    +  F        +P  +   +     +GL  L+ +AG   ST+
Sbjct: 297 IARFHDEAAADAAEQEFVNRFQKGAIPDEVPEFTFEGE-----IGLAALLKEAGLVPSTS 351

Query: 367 EARRHLKSNAIKINNSIISNEK 388
           EA R  +   +KI+   + + K
Sbjct: 352 EAIRSAQQGGVKIDGEKVEDVK 373


>gi|332286792|ref|YP_004418703.1| tyrosyl-tRNA synthetase [Pusillimonas sp. T7-7]
 gi|330430745|gb|AEC22079.1| tyrosyl-tRNA synthetase [Pusillimonas sp. T7-7]
          Length = 409

 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 101/385 (26%), Positives = 176/385 (45%), Gaps = 31/385 (8%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  +  LQ  GH  I L+G  TS+IGDPS R+ +R  + +++I
Sbjct: 50  LGLDPTAPDIHLGHTVVLNKMRQLQDLGHTVIFLIGDFTSMIGDPSGRNATRPPLTAEQI 109

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           QEN +      S  +     +T+  +  N  W C       + ++ S ++V RM+  E  
Sbjct: 110 QENAKTYYAQASLVLD--PSRTE--IRYNSEW-CDPLGARGMIQLASRYTVARMMEREDF 164

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R K    +S  EF Y ++Q YD V L  +    L++GG+DQ  N++ G +L +     
Sbjct: 165 TRRFKGGIPISVHEFLYPLMQGYDSVALKSD----LELGGTDQKFNLLVGRELQKEYGQE 220

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               LT PLL    G  KM K+    I + +   +P + +    +I D  +  + + L+ 
Sbjct: 221 PQCILTMPLLEGTDGVDKMSKSKGNYIGITE---APESMFGKLMSISDTLMWKYYELLS- 276

Query: 279 LPMSEIDRMAKLQ-----GKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS 333
                +D +A+LQ     G    + K ++  EI    H ++ A  A  +    F      
Sbjct: 277 --FRSMDDIAQLQNQVKSGMNPRDVKVMLGQEIVARFHTQQAAHDALASFEARFRDGAIP 334

Query: 334 QHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL 393
           + MP + +     +  +G+L ++ +AG   S  EA+R+++   ++++   I ++ LQ+  
Sbjct: 335 EDMPEVQLG----AAPLGILKVLREAGLVASGAEAQRNVEQGGVRVDGDRIEDKSLQL-- 388

Query: 394 QDFDSTGNIKLSFGKKNHIICHLCG 418
                 G   +  GK+      L G
Sbjct: 389 ----PAGTYVVQVGKRKFARVTLTG 409


>gi|219847373|ref|YP_002461806.1| tyrosyl-tRNA synthetase [Chloroflexus aggregans DSM 9485]
 gi|219541632|gb|ACL23370.1| tyrosyl-tRNA synthetase [Chloroflexus aggregans DSM 9485]
          Length = 390

 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 96/376 (25%), Positives = 173/376 (46%), Gaps = 27/376 (7%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D T   +H GH   L  L   Q+ GH+ + ++G  T+ IGDPS RDE+R  + + E++
Sbjct: 35  GFDPTKPDMHIGHAVGLRKLRAFQELGHQVVLIVGDWTAQIGDPSGRDETRARLSAAEVR 94

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
            N E        F +    +   +   +E W       + L ++   F++ +ML+ E+ R
Sbjct: 95  ANAET---YMEQFFRVVDRQRTEVRWQSE-WFGQFTLENAL-DLAGRFTLAQMLAHETFR 149

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TP 219
            R +    L+ LE  Y +LQAYD V +  +    ++ GG+DQ  NI+ G +L  +L  TP
Sbjct: 150 KRYETGAPLTILELMYPMLQAYDSVAIRAD----VEFGGTDQKFNILAGRELMAQLGMTP 205

Query: 220 KLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTL 279
           +   L  PL+    G KM KT +  + +      P   +    ++ D  +  + + LT +
Sbjct: 206 QQVFLV-PLIPGTDGRKMSKTFNNTVDIR---MPPTEMYGRIMSMSDEVLPLYFEVLTDV 261

Query: 280 PMSEIDRM-AKLQGKEIN--EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM 336
           PM+EI  M   +   ++N  + K  +A EI    H    A  A    +  F      + +
Sbjct: 262 PMAEIAEMKTAMATGQVNPRDLKMRLAREIVAQFHDPAAAAAAEATFIRQFVERELPEDI 321

Query: 337 PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
           P  ++         G++ ++V +G A S +EARR +    ++++   +    L I     
Sbjct: 322 PNFTLEAP-----TGIVDVLVASGLAPSKSEARRLIDGGGVRVDGERVEGYTLTI----- 371

Query: 397 DSTGNIKLSFGKKNHI 412
           +   N+ +  G++  +
Sbjct: 372 NPGANVVVQVGRRKFV 387


>gi|77919942|ref|YP_357757.1| tyrosyl-tRNA synthetase [Pelobacter carbinolicus DSM 2380]
 gi|115305812|sp|Q3A220|SYY_PELCD RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|77546025|gb|ABA89587.1| tyrosyl-tRNA synthetase [Pelobacter carbinolicus DSM 2380]
          Length = 408

 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 98/380 (25%), Positives = 167/380 (43%), Gaps = 34/380 (8%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   +  L   Q  GH+   L+G  T +IGDP+ ++E+R+ +  +E+ 
Sbjct: 43  GFDPTAPDLHVGHTVLIQKLKQFQDLGHEVNFLIGDFTGMIGDPTGKNETRKALTREEVL 102

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           +N E  K      +     K    ++ N +W+  +   DL+   G  ++V RML  +   
Sbjct: 103 KNAETYKQQVFKILDPERTK----VVFNSSWMGQMSAADLIGLAGR-YTVARMLERDDFH 157

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R   +Q ++  EF Y ++Q YD V L  +    +++GG+DQ  N++ G +L ++     
Sbjct: 158 KRFSGQQPIAIHEFLYPLVQGYDSVALKAD----VELGGTDQKFNLLVGRELQKQEGQVP 213

Query: 221 LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYN---------FWQYWRNIDDADVV 270
              LT PLL    G  KM K+L   I + +     +            +Y+  + D D  
Sbjct: 214 QCVLTMPLLEGLDGVNKMSKSLGNYIGITEPAKEVFGKVMSISDELMLRYYELLSDVD-- 271

Query: 271 SFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMS 330
                L  L +       K  G    E+KK +A E+    + +  A +A    ++ F   
Sbjct: 272 -----LAQLQLVRDGVEGKAGGAHPMESKKSLARELVARFYDQAAALRAEEEFVQQFKQK 326

Query: 331 IHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQ 390
                +P + I   E    + +  L+  AG   S  EARR +K  A+K+    I++  L+
Sbjct: 327 EVPDDIPEVLIDAGEP---VWICRLLTDAGLTASNGEARRLVKQGAVKLGGEKIADAGLE 383

Query: 391 IKLQDFDSTGNIKLSFGKKN 410
           +        G + L  GK+ 
Sbjct: 384 VA-----PAGELILQAGKRR 398


>gi|91774420|ref|YP_544176.1| tyrosyl-tRNA synthetase [Methylobacillus flagellatus KT]
 gi|91708407|gb|ABE48335.1| tyrosyl-tRNA synthetase [Methylobacillus flagellatus KT]
          Length = 399

 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 103/387 (26%), Positives = 181/387 (46%), Gaps = 26/387 (6%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG    I     +D L +   +    G+D TA  LH GH   L  L   Q  GHK +
Sbjct: 10  LIKRGIDDLIGEQELIDKLNTGQPLKVKAGFDPTAPDLHLGHAVLLNKLRQFQDLGHKVL 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T +IGDP+ +  +R  + ++++Q N    +      +K    +T+ +   N +W
Sbjct: 70  FLIGDFTGMIGDPTGKSATRPPLSAEQVQVNARTYQEQVFKILK--PEQTEVVF--NSSW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +  +    +L+ + +  +V RML  +    R K  Q ++  EF Y +LQ YD V L  + 
Sbjct: 126 INELGAAGMLK-LAATHTVARMLERDDFEKRYKNNQPIAIHEFLYPLLQGYDSVALKAD- 183

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G +L +         LT PLL    G  KM K+L   I +   
Sbjct: 184 ---IELGGTDQRFNLLMGRELQKHFGQLPQSVLTVPLLEGLDGVNKMSKSLGNYIGI--- 237

Query: 251 MTSPYN-FWQYWRNIDDADVVSFAKRLTTLPMSEIDR-MAKLQGKEINEAKKI-IATEIT 307
              P N  +    ++ D  +  +   L+   M  I+R  A +Q  E     K+  A EI 
Sbjct: 238 -AEPANTIFSKLMSVSDELMWRYITLLSFESMETIERWRASVQAGENPRNIKVRFAQEIV 296

Query: 308 TMVHGREEAEKAATAAMECFDMSIH---SQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           T  HG++    AA  A+  F++       +++P +++   E +  +G   L+ +AG   S
Sbjct: 297 TRFHGKQ----AAVDALADFELRSKGGIPENVPEVNVVIKEAAVAIG--PLLKQAGLVAS 350

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQI 391
           T+EA R ++   ++++   + +  LQ+
Sbjct: 351 TSEAFRMIEQGGVRLDGEKVMDRGLQV 377


>gi|218665375|ref|YP_002427447.1| tyrosyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC 23270]
 gi|218517588|gb|ACK78174.1| tyrosyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC 23270]
          Length = 407

 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 97/375 (25%), Positives = 169/375 (45%), Gaps = 24/375 (6%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  LH GH   L      Q  GH+ + ++G  T++IGDP+ +  +R+ +  +E+
Sbjct: 43  LGMDPTAPDLHLGHTVLLHKARQFQDLGHRLLFVIGDFTAMIGDPTGKSVTRKALSREEV 102

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
             N    +       K    +   +M N+E WL +++  +L+ +I + ++V RML  +  
Sbjct: 103 VANAATYR---RQVFKILDPERTEVMFNSE-WLGALRPEELI-QIAACYTVARMLERDDF 157

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R    Q ++  EF Y +LQ YD V +  +    +++GG+DQ  N++ G +L       
Sbjct: 158 NKRYSANQPIAIHEFLYPLLQGYDSVAIKAD----VELGGTDQRFNLLVGRELQREYGQK 213

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               LT P+L    G  KM K+L   I +      P   +    +I D  +  +   L+ 
Sbjct: 214 PQLVLTMPILEGLDGVQKMSKSLGNFIAVED---PPAEMFGKIMSISDFLMWRYYALLSR 270

Query: 279 LPMSEIDRMAKLQGKEINEAKKI---IATEITTMVHGREEAEKAATAAMECFDMSIHSQH 335
           +P  E  R+ K         + I   +A E+    HG   A++A  A +  F      + 
Sbjct: 271 VPAVEQTRLQKEAASGARNPRDIKLDLAGELVRRFHGTAAAQEAHIAFLARFQRHETPED 330

Query: 336 MPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           +P  +I   E  R   L  L+V+   A ST+EA R +K  A++++   + +    + L  
Sbjct: 331 LPLQAIKLSEAPR---LSQLLVQVHLAASTSEAMRKMKEGAVRVDGERVVDPATILALD- 386

Query: 396 FDSTGNIKLSFGKKN 410
                   L FGK++
Sbjct: 387 ----AVYLLQFGKRH 397


>gi|256821638|ref|YP_003145601.1| tyrosyl-tRNA synthetase [Kangiella koreensis DSM 16069]
 gi|256795177|gb|ACV25833.1| tyrosyl-tRNA synthetase [Kangiella koreensis DSM 16069]
          Length = 398

 Score =  117 bits (293), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 95/352 (26%), Positives = 168/352 (47%), Gaps = 24/352 (6%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   +  L   Q+ GH+ I L+G  T +IGDP+ ++ +R+ +   ++ 
Sbjct: 39  GFDPTAPDLHLGHTVLINKLRQFQQLGHEVIFLIGDFTGMIGDPTGKNATRKPLTRDDVL 98

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
            N E  K       K        +  N+E W   +    +++ + S  +V RML  +  +
Sbjct: 99  ANAETYK---EQVFKILDPAKTTIAFNSE-WCEKLGAAGMIK-LASHTTVARMLERDDFK 153

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL----GERL 216
            R   EQ ++  EF Y ++Q YD V L    +  +++GG+DQ  N++ G +L    G+R 
Sbjct: 154 KRYGNEQPIAIHEFLYPLVQGYDSVAL----ESDVELGGTDQRFNLLMGRELQKHYGQRP 209

Query: 217 KTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKR 275
           +T     L  PLL    G  KM K+L   + + +   +P   +Q   +I D+ +  + + 
Sbjct: 210 QT----VLMMPLLEGLDGVQKMSKSLGNYVGITE---APGVMYQKLLSIPDSMMWRYFEL 262

Query: 276 LTTLPMSEIDRMAKL--QGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS 333
           L+  P+ EID + K   QG    + K  +A EI    H +E A+ A  AA          
Sbjct: 263 LSFRPLPEIDELKKQVEQGANPRDIKIELAKEIIERFHDKEAADNAHKAAGNIIKEGEVP 322

Query: 334 QHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIIS 385
           +  P + +   E +    +   I +AG A+++ +A+  LK+  +K++  ++ 
Sbjct: 323 EGTPQVEVDM-EGAEQFPIGATINRAGLASNSAQAKDMLKNGRVKVDWEVVE 373


>gi|307730951|ref|YP_003908175.1| tyrosyl-tRNA synthetase [Burkholderia sp. CCGE1003]
 gi|307585486|gb|ADN58884.1| tyrosyl-tRNA synthetase [Burkholderia sp. CCGE1003]
          Length = 416

 Score =  117 bits (293), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 101/372 (27%), Positives = 181/372 (48%), Gaps = 44/372 (11%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  +  LQ  GH  I L+G  TS+IGDPS R+ +R  +  ++I
Sbjct: 58  LGLDPTAPDIHIGHTVVLNKMRQLQDLGHTVIFLIGDFTSLIGDPSGRNATRPPLTREQI 117

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKY---------IDLLREIGSFFSV 150
           + N    K  F         +  AL+L+ E     I+Y          D + ++ S ++V
Sbjct: 118 ESN---AKTYF---------EQAALVLDREK--TEIRYNSEWSMPLGADGMIKLASRYTV 163

Query: 151 NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGI 210
            R+L  E    R +    +S  EF Y ++Q YD V L    +  L++GG+DQ  N++ G 
Sbjct: 164 ARILEREDFTKRFQSGVPISIHEFLYPLMQGYDSVAL----NADLELGGTDQKFNLLVGR 219

Query: 211 DLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADV 269
           +L ++    +   LT PLL    G  KM K+ +  I ++++   P + +    +I D  +
Sbjct: 220 ELQKQYGQEQQCILTMPLLEGLDGVEKMSKSKNNYIGISEK---PTDMFGKLMSISDTLM 276

Query: 270 VSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECF 327
             + + L+  PM EI   R     G+   + K ++  EI    H + +AE+    A+E F
Sbjct: 277 WRYFELLSFRPMDEIAAFRKEAEAGRNPRDFKVMLGQEIVARFHSQADAER----ALEDF 332

Query: 328 DMSIH---SQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSII 384
           +          +P +++S   ++ G     L+ +A    ST+EA R+++   +KI+ + +
Sbjct: 333 NHRAKGGVPDDIPAVALSGAPLAIGQ----LLKQANLVPSTSEALRNIEQGGVKIDGATV 388

Query: 385 SNEKLQIKLQDF 396
           S++ L+++  ++
Sbjct: 389 SDKGLKVEAGEY 400


>gi|113866519|ref|YP_725008.1| tyrosyl-tRNA synthetase [Ralstonia eutropha H16]
 gi|113525295|emb|CAJ91640.1| Tyrosyl-tRNA synthetase [Ralstonia eutropha H16]
          Length = 413

 Score =  117 bits (293), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 98/376 (26%), Positives = 178/376 (47%), Gaps = 32/376 (8%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  L  LQ  GH+ I L+G  TS IGDPS R+ +R  +  ++I
Sbjct: 56  LGLDPTAPDIHIGHTVVLNKLRQLQDLGHQVIFLIGDFTSTIGDPSGRNSTRPPLTREQI 115

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           + N +      S  +     +T+  +  N  W C       + ++ + ++V RM+  +  
Sbjct: 116 EANAQTYYRQASLVLD--PARTE--IRYNSEW-CDPLGARGMIQLAAKYTVARMMERDDF 170

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R +    +S  EF Y ++Q YD V L  +    L++GG+DQ  N++ G +L +     
Sbjct: 171 TKRFRSGIPISVHEFLYPLMQGYDSVALKSD----LELGGTDQKFNLLVGRELQKEYGQE 226

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               LT PLL    G  KM K+    + + +   +P   +    +I D  +  +   L+ 
Sbjct: 227 PQCILTMPLLVGLDGVEKMSKSKGNYVGVTE---APNEMFGKLMSISDDLMWQYYTLLSF 283

Query: 279 LPMSEIDRMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIH---S 333
            P++EI+ M +    G+   + K ++A EI    H + +AEK    A+E F+        
Sbjct: 284 RPLAEIELMKQEIALGRNPRDCKVLLAQEIVARFHSQADAEK----ALEDFNHRARGGVP 339

Query: 334 QHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL 393
             +P +S++       +G+  L+ +A    ST+EA R+++   +KI+ + +S++  ++  
Sbjct: 340 DDIPAVSLT----GAPLGIAQLLKQANLVPSTSEANRNIEQGGVKIDGATVSDKATRV-- 393

Query: 394 QDFDSTGNIKLSFGKK 409
               + G   +  GK+
Sbjct: 394 ----AAGTYVVQVGKR 405


>gi|262274957|ref|ZP_06052768.1| tyrosyl-tRNA synthetase [Grimontia hollisae CIP 101886]
 gi|262221520|gb|EEY72834.1| tyrosyl-tRNA synthetase [Grimontia hollisae CIP 101886]
          Length = 395

 Score =  117 bits (293), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 90/353 (25%), Positives = 169/353 (47%), Gaps = 20/353 (5%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   +  L   Q+ GH+ I L+G  T+++GDPS ++ +R  +  +++
Sbjct: 38  LGADPTAPDIHLGHTVIMNKLRAFQELGHEVIFLIGDYTAMVGDPSGKNTTRPPLTREQV 97

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
             N E  K      +     + +     N +WL  +    ++R + +  +V RML  +  
Sbjct: 98  LANAETYKEQIFKILDPNKTRVEF----NSSWLGELGTDGMIR-LAASSTVARMLERDDF 152

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
           + R    Q ++  EF Y +LQ YD V L    +  +++GG+DQ  N++ G +L ++   P
Sbjct: 153 KKRYSNNQPIAIHEFIYPLLQGYDSVAL----EADVELGGTDQKFNLLMGRELQKQNGQP 208

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
           +   +T PLL    G  KM K+ +  I ++    +P   +    +I D  + ++ + L+ 
Sbjct: 209 QQVVITMPLLVGLDGVKKMSKSANNYIGIS---DAPNEMFGKIMSISDDLMWNYYELLSF 265

Query: 279 LPMSEIDRMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM 336
            P+ EI+ + +    G+   + K ++A EI    H   +A+ A    +  F        M
Sbjct: 266 RPLEEIEGLKQEIANGRNPRDVKILLAKEIIARFHSEADADAAEADFINRFQKGAMPDEM 325

Query: 337 PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKL 389
           P  S ++     G+ +  L+  A    ST++A R ++  A+KI+   + + KL
Sbjct: 326 PEFSFAQ-----GVAIANLLKDADLVGSTSDAMRMIRQGAVKIDGEKVDDTKL 373


>gi|198284765|ref|YP_002221086.1| tyrosyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC 53993]
 gi|198249286|gb|ACH84879.1| tyrosyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC 53993]
          Length = 405

 Score =  117 bits (293), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 97/375 (25%), Positives = 169/375 (45%), Gaps = 24/375 (6%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  LH GH   L      Q  GH+ + ++G  T++IGDP+ +  +R+ +  +E+
Sbjct: 41  LGMDPTAPDLHLGHTVLLHKARQFQDLGHRLLFVIGDFTAMIGDPTGKSVTRKALSREEV 100

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
             N    +       K    +   +M N+E WL +++  +L+ +I + ++V RML  +  
Sbjct: 101 VANAATYR---RQVFKILDPERTEVMFNSE-WLGALRPEELI-QIAACYTVARMLERDDF 155

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R    Q ++  EF Y +LQ YD V +  +    +++GG+DQ  N++ G +L       
Sbjct: 156 NKRYSANQPIAIHEFLYPLLQGYDSVAIKAD----VELGGTDQRFNLLVGRELQREYGQK 211

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               LT P+L    G  KM K+L   I +      P   +    +I D  +  +   L+ 
Sbjct: 212 PQLVLTMPILEGLDGVQKMSKSLGNFIAVED---PPAEMFGKIMSISDFLMWRYYALLSR 268

Query: 279 LPMSEIDRMAKLQGKEINEAKKI---IATEITTMVHGREEAEKAATAAMECFDMSIHSQH 335
           +P  E  R+ K         + I   +A E+    HG   A++A  A +  F      + 
Sbjct: 269 VPAVEQTRLQKEAASGARNPRDIKLDLAGELVRRFHGTAAAQEAHIAFLARFQRHETPED 328

Query: 336 MPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           +P  +I   E  R   L  L+V+   A ST+EA R +K  A++++   + +    + L  
Sbjct: 329 LPLQAIKLSEAPR---LSQLLVQVHLAASTSEAMRKMKEGAVRVDGERVVDPATILALD- 384

Query: 396 FDSTGNIKLSFGKKN 410
                   L FGK++
Sbjct: 385 ----AVYLLQFGKRH 395


>gi|117925622|ref|YP_866239.1| tyrosyl-tRNA synthetase [Magnetococcus sp. MC-1]
 gi|117609378|gb|ABK44833.1| tyrosyl-tRNA synthetase [Magnetococcus sp. MC-1]
          Length = 404

 Score =  117 bits (293), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 89/361 (24%), Positives = 162/361 (44%), Gaps = 30/361 (8%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   L  L   Q+ GH+ + L+G  T+ IGDP+ + E+R+ +   ++ 
Sbjct: 43  GFDPTAPDLHLGHTVLLHKLRQFQELGHQVLFLIGDFTAQIGDPTGKSETRKSLTPADVA 102

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
            N E  K     F      +T+ +   N +W+  ++  D+++ + + F+V RML  +   
Sbjct: 103 SNAETYKE--QVFKLLDAQRTEVVF--NSSWMGQLRASDMIK-LAAQFTVARMLERDDFS 157

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R K  + ++  EF Y ++Q YD V L    +  +++GG+DQ  N++ G +L +      
Sbjct: 158 KRYKEGRPIAIHEFLYPLVQGYDSVAL----EADVELGGTDQLFNLLVGRELQKDAGQEP 213

Query: 221 LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYN---------FWQYWRNIDDADVV 270
              +T P+L    G  KM K+L+  I + +     +           W+Y+  + D ++ 
Sbjct: 214 QCVITLPILEGLDGVNKMSKSLNNYIGVKEPAREIFGKCMSISDDLMWRYYELLSDQEMA 273

Query: 271 SFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMS 330
                   +       M         EAKK +A E+    HG E A  A       F   
Sbjct: 274 QITHLRGEVEAGRYHPM---------EAKKALAAELVERFHGAEAAVAARAEFEGMFKKG 324

Query: 331 IHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQ 390
                +P +++  +  +  +GL  L+ +AG   S  E  R +  NA+ +    +S+ + +
Sbjct: 325 DLPDDVPELTVKAEGAN--LGLAALLCQAGLVKSNGEGMRMISQNAVSVEREKVSDGRYE 382

Query: 391 I 391
           +
Sbjct: 383 L 383


>gi|330980904|gb|EGH79007.1| tyrosyl-tRNA synthetase [Pseudomonas syringae pv. aptata str. DSM
           50252]
          Length = 399

 Score =  117 bits (293), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 97/347 (27%), Positives = 158/347 (45%), Gaps = 18/347 (5%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   +  L   Q  GH+ I L+G  T +IGDPS +  +R  +  +++ 
Sbjct: 39  GFDPTAPDLHLGHTVLINKLRQFQDLGHQIIFLIGDFTGMIGDPSGKSATRPPLTREQVL 98

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           +  E  K     F      KT+     N TW+  +   D +R + S ++V RML  +   
Sbjct: 99  DYAETYKS--QVFKILDPAKTEVAF--NSTWMDQLSPADFIR-LSSQYTVARMLERDDFD 153

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R K  QS++  EF Y ++Q YD V L  +    +++GG+DQ  N++ G +L        
Sbjct: 154 KRYKSNQSIAIHEFLYPLVQGYDSVALKAD----VELGGTDQKFNLLMGRELQRAYGQEP 209

Query: 221 LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTL 279
              LT PLL    G  KM K+L   + + +   +P   +    +I D+ +  + + L+  
Sbjct: 210 QCILTMPLLEGLDGVKKMSKSLGNYVGIQE---APGIMYSKLVSIPDSLMWRYFELLSFR 266

Query: 280 PMSEIDRMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMP 337
            M EID +      G    + K  +A E+    HG E A  A  +A            +P
Sbjct: 267 SMEEIDGLKADCEAGANPRDIKIKLAEELVARFHGEEAAANAHRSAGNRMKEGELPDDLP 326

Query: 338 TISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSII 384
            IS++  E    M +  ++ KAG   +   AR  L S  ++I+  ++
Sbjct: 327 EISVAAAE---DMPISAVLNKAGLVKNAAVARDLLASGGVRIDGEVV 370


>gi|330898958|gb|EGH30377.1| tyrosyl-tRNA synthetase [Pseudomonas syringae pv. japonica str.
           M301072PT]
          Length = 403

 Score =  117 bits (293), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 97/347 (27%), Positives = 158/347 (45%), Gaps = 18/347 (5%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   +  L   Q  GH+ I L+G  T +IGDPS +  +R  +  +++ 
Sbjct: 39  GFDPTAPDLHLGHTVLINKLRQFQDLGHQIIFLIGDFTGMIGDPSGKSATRPPLTREQVL 98

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           +  E  K     F      KT+     N TW+  +   D +R + S ++V RML  +   
Sbjct: 99  DYAETYKS--QVFKILDPAKTEVAF--NSTWMDQLSPADFIR-LSSQYTVARMLERDDFD 153

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R K  QS++  EF Y ++Q YD V L  +    +++GG+DQ  N++ G +L        
Sbjct: 154 KRYKSNQSIAIHEFLYPLVQGYDSVALKAD----VELGGTDQKFNLLMGRELQRAYGQEP 209

Query: 221 LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTL 279
              LT PLL    G  KM K+L   + + +   +P   +    +I D+ +  + + L+  
Sbjct: 210 QCILTMPLLEGLDGVKKMSKSLGNYVGIQE---APGIMYSKLVSIPDSLMWRYFELLSFR 266

Query: 280 PMSEIDRMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMP 337
            M EID +      G    + K  +A E+    HG E A  A  +A            +P
Sbjct: 267 SMEEIDGLKADCEAGANPRDIKIKLAEELVARFHGEEAAANAHRSAGNRMKEGELPDDLP 326

Query: 338 TISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSII 384
            IS++  E    M +  ++ KAG   +   AR  L S  ++I+  ++
Sbjct: 327 EISVAAAE---DMPISAVLNKAGLVKNAAVARDLLASGGVRIDGEVV 370


>gi|54296597|ref|YP_122966.1| tyrosyl-tRNA synthetase [Legionella pneumophila str. Paris]
 gi|81371093|sp|Q5X7H7|SYY_LEGPA RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|53750382|emb|CAH11776.1| tyrosyl-tRNA synthetase [Legionella pneumophila str. Paris]
          Length = 401

 Score =  117 bits (293), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 95/356 (26%), Positives = 167/356 (46%), Gaps = 18/356 (5%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   L  L   Q+ GH+ I L+G  T++IGDP+ ++ +R  +  + + 
Sbjct: 39  GFDPTAPDLHLGHTVLLNKLRQFQQFGHEVIFLIGDFTAMIGDPTGKNVTRMPLSQETVL 98

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           EN +  +     F      KT      N  WL     +DL+R + +  +V RML  +   
Sbjct: 99  ENAKTYQ--HQVFKILDPDKTTVAF--NSQWLNKFNAVDLIR-LAATHTVARMLERDDFN 153

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R    Q ++  EF Y +LQ YD V L  +    +++GG+DQ  N++ G +L +      
Sbjct: 154 KRYTTGQPIAIHEFLYPLLQGYDSVALKAD----VELGGTDQKFNLLMGRELQKHYGFEP 209

Query: 221 LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTL 279
              + +PL+    G  KM K+L   I +N+   +P   +    ++ D  +  +   L+  
Sbjct: 210 QVVMMTPLIEGLDGVKKMSKSLDNYIGINE---TPEQIFGKIMSVSDELMWRYIDLLSFK 266

Query: 280 PMSEIDRMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMP 337
              EI ++ +  L+GK   + K   A EI    H + +AE A    +E F      + + 
Sbjct: 267 TGKEIQQLKQSVLEGKNPRDVKIDFAKEIVARFHDQTQAELAHNNFIERFQKGNIPEDLE 326

Query: 338 TISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL 393
            +S+    +   + L  L+ +     ST+E+ R +K  A+K++   IS+  L++ +
Sbjct: 327 ELSLV---IVEPIALAQLLKQIDLTASTSESIRMVKQGAVKVDGDKISDPSLKLPI 379


>gi|210622728|ref|ZP_03293320.1| hypothetical protein CLOHIR_01268 [Clostridium hiranonis DSM 13275]
 gi|210154060|gb|EEA85066.1| hypothetical protein CLOHIR_01268 [Clostridium hiranonis DSM 13275]
          Length = 431

 Score =  117 bits (293), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 93/365 (25%), Positives = 176/365 (48%), Gaps = 28/365 (7%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D +A  +H GH   L  +  LQ  GH+ + ++G  T  IGDP+ + ++R+ + ++++
Sbjct: 73  LGLDPSAPDIHLGHTVVLRKMKQLQDLGHQVVIIIGDFTGKIGDPTGKSKTRKALTTEQV 132

Query: 100 QENIEKIK-GIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
            EN +  +  IF    K  T     ++  N  WL  + + ++++ + +  +V RML  E 
Sbjct: 133 LENAKTYQEQIFKVLDKDKT-----IVRYNSEWLGKLNFEEVIK-LAATITVARMLERED 186

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
            + R + +  +S  EF Y ++QAYD + +    D  +++GG+DQ  N++ G  L      
Sbjct: 187 FKKRYEGQMPISVHEFFYPLMQAYDSIAI----DADIELGGTDQRFNLLMGRSLQREFDK 242

Query: 219 PKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT 277
                +  PLL    G  KM K+L   I +++E    Y   Q    I D  ++ +   +T
Sbjct: 243 ESQVVIMMPLLEGLDGVNKMSKSLGNYIGIDEEAGLMY---QKAMEIPDELIIKYYNLVT 299

Query: 278 TL-PMSEIDRMAKLQ-GKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQH 335
            + P +  +  AKL+ G    + K  +A EI T+ HG E+A++A       F       +
Sbjct: 300 DVHPDAVAEIEAKLEGGANPRDIKMELAKEIVTLYHGEEKAQEAENRFKSVF----QKGN 355

Query: 336 MPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKIN-------NSIISNEK 388
           +P   ++ +  +  + +  + V+     S +E RR  K   +K+N       N++ +N +
Sbjct: 356 IPDDILTVEVAAADLDIAGIAVENKLVPSKSEIRRLAKQGGVKVNGEKVNDLNAVEANGE 415

Query: 389 LQIKL 393
           L I++
Sbjct: 416 LVIQI 420


>gi|84998594|ref|XP_954018.1| tyrosyl-tRNA synthetase [Theileria annulata]
 gi|65305016|emb|CAI73341.1| tyrosyl-tRNA synthetase, putative [Theileria annulata]
          Length = 520

 Score =  117 bits (292), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 107/449 (23%), Positives = 195/449 (43%), Gaps = 102/449 (22%)

Query: 37  TAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSF---RDESRRM 93
           + Y G D T   +H G L QL+LL          + ++GGGT+++GDPS+   R+ + + 
Sbjct: 34  SIYYGIDCTNDFIHEGTLFQLLLLRRFLSEKFNVVLVIGGGTTLVGDPSYKLRRNRNDKF 93

Query: 94  MRSQEI------------QENIEKIKG-IFSSFIKYGTGKTD------------------ 122
             S  +            +++IE+I   I S  IK      D                  
Sbjct: 94  YFSNFVLNKDKSEFDTTNEQSIEQIATKILSLPIKIDNTSPDNNNNYALPKVVRVSDLST 153

Query: 123 -------------ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR------- 162
                          ++NN      +  ++ L  +    +V RMLS + ++ R       
Sbjct: 154 DLDVSSEMCNPYRVFIVNNRDIYNRVNLMEYLETVARNMNVGRMLSRDCIKIRTVDKDGT 213

Query: 163 -LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKL 221
             K+  ++   E  YM LQA DFV LA+N++C++Q+GG+DQ GNII GI+L   L    +
Sbjct: 214 GYKKSINMDLSELMYMSLQAMDFVYLAENFNCKIQLGGNDQLGNIISGIELASSLGIGNI 273

Query: 222 FALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDAD------------- 268
           F +T+PLL    G K+ KT S          SP+ FW ++R++DD+              
Sbjct: 274 FGITTPLLKDKFGEKISKTGSNCFLKITNKISPHEFWSHFRSVDDSVLEKYYHYLYSYIY 333

Query: 269 -------VVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAE---- 317
                  + S+ K  T + +   D++ +   +  N  K ++A E+T +++G +  E    
Sbjct: 334 IWPINNILYSYLKWFTDVSL---DKIKETMAEHYNSGKVLLADELTRLLYGNQMVELIHK 390

Query: 318 --------------KAATAAMECFDMSIH-SQHMPTISISKDEVSR-GMGLLTLIVKAGF 361
                               ME F+  I+ S+ +P I+++  ++S+ G+ LL ++     
Sbjct: 391 FCMSKQFSELKPFLTNFDTNMEEFESFINFSKAVPHINLTSQQLSKVGVKLLEVLDAVRV 450

Query: 362 ATSTNEA----RRHLKSNAIKINNSIISN 386
              +N      ++ +K    ++N +++++
Sbjct: 451 PQFSNACFHSNKKFIKEGGCRVNGNVVTD 479


>gi|332968312|gb|EGK07384.1| tyrosine--tRNA ligase [Psychrobacter sp. 1501(2011)]
          Length = 411

 Score =  117 bits (292), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 96/374 (25%), Positives = 174/374 (46%), Gaps = 26/374 (6%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           I SE   I ++   R L I           G+D TA  LH GH   +  L   Q  GH+ 
Sbjct: 29  IFSEEDLIAKLKLGRPLKIKA---------GFDPTAPDLHLGHTVLINKLKHFQDLGHEI 79

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEK-IKGIFSSFIKYGTGKTDALMLNNE 129
             L+G  T+ IGDPS ++ +R  +  +++  N +   + +F    K  T      ++ N 
Sbjct: 80  YFLIGDYTAKIGDPSGKNSTRPPLTDEQVLANAKTYAEQVFKILDKDKTK-----VVFNS 134

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
            W   +   D++ ++ S  +V+RML  +    R   +  ++  EF Y ++Q YD + L  
Sbjct: 135 QWFNEMSAGDMI-QLASQLTVSRMLERDDFAKRYASQTPIAIHEFLYPLVQGYDSIAL-- 191

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLN 248
             +  ++MGG+DQ  N++ G  L  R        +T P+L    G  KM K+L   + + 
Sbjct: 192 --EADVEMGGTDQTFNLLMGRTLQGRYGHEAQVCITVPILEGLDGVNKMSKSLGNYVGIE 249

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR-MAKLQ-GKEINEAKKIIATEI 306
               +P   +Q   ++ D  +  + + L+  PM E+D  MA+++ G+   E K+I+A E+
Sbjct: 250 D---APGVMFQKILSMPDTLIHRYFEFLSFKPMEEVDALMAEMENGRNPQEIKRILAEEL 306

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
               H +E AE A  +A            +P +++  +     + +  ++ +A  A ++ 
Sbjct: 307 IERFHDKEAAENAHKSAGNVLADGELPVDLPEVTLELEAGQEALFITQILNQADLAKNSA 366

Query: 367 EARRHLKSNAIKIN 380
            A+  LK NA+K++
Sbjct: 367 AAKDMLKRNAVKVD 380


>gi|76810785|ref|YP_334783.1| tyrosyl-tRNA synthetase [Burkholderia pseudomallei 1710b]
 gi|76580238|gb|ABA49713.1| tyrosyl-tRNA synthetase [Burkholderia pseudomallei 1710b]
          Length = 435

 Score =  117 bits (292), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 99/364 (27%), Positives = 179/364 (49%), Gaps = 28/364 (7%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  +  LQ  GH  I L+G  TS+IGDPS R+ +R  +  ++I
Sbjct: 77  LGLDPTAPDIHLGHTVVLNKMRQLQDLGHTVIFLIGDFTSLIGDPSGRNATRPPLTREQI 136

Query: 100 QENIEKIKGIF-SSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
           + N    K  F  + +     KT+  +  N  W   +   D + ++ S ++V RML  E 
Sbjct: 137 ESN---AKTYFEQAALVLDRAKTE--IRYNSEWSMPLG-ADGMIKLASRYTVARMLERED 190

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
              R +    +S  EF Y ++Q YD V L    +  L++GG+DQ  N++ G +L ++   
Sbjct: 191 FTKRFQGGIPISIHEFLYPLMQGYDSVAL----NADLELGGTDQKFNLLVGRELQKQYGQ 246

Query: 219 PKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT 277
            +   LT PLL    G  KM K+    + ++++   P + +    +I D  +  + + L+
Sbjct: 247 EQQCILTMPLLEGLDGVEKMSKSKGNYVGISEK---PTDMFGKLMSISDVLMWRYFELLS 303

Query: 278 TLPMSEIDRM--AKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIH--- 332
              + EI R       G+   + K ++A EI    H + +AE+    A+E F+       
Sbjct: 304 FRSLDEIARFRGEAEGGRNPRDFKVMLAQEIVARFHSQADAER----ALEDFNHRAKGGV 359

Query: 333 SQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
              +P ++++   ++ G     L+ +AG   ST+EA R+++   +KI+ + +S++ L++ 
Sbjct: 360 PDDIPAVTLAGAPLAIGQ----LLKQAGLVPSTSEALRNIEQGGVKIDGATVSDKALKVD 415

Query: 393 LQDF 396
             +F
Sbjct: 416 AGEF 419


>gi|167837841|ref|ZP_02464724.1| tyrosyl-tRNA synthetase [Burkholderia thailandensis MSMB43]
          Length = 413

 Score =  117 bits (292), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 102/372 (27%), Positives = 182/372 (48%), Gaps = 44/372 (11%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  +  LQ  GH  I L+G  TS+IGDPS R+ +R  +  ++I
Sbjct: 55  LGLDPTAPDIHLGHTVVLNKMRQLQDLGHTVIFLIGDFTSLIGDPSGRNATRPPLTREQI 114

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKY---------IDLLREIGSFFSV 150
           + N    K  F         +  AL+L+ E     I+Y          D + ++ S ++V
Sbjct: 115 ESN---AKTYF---------EQAALVLDREK--TEIRYNSEWSMPLGADGMIKLASRYTV 160

Query: 151 NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGI 210
            RML  E    R +    +S  EF Y ++Q YD V L    +  L++GG+DQ  N++ G 
Sbjct: 161 ARMLEREDFTKRFQGGIPISIHEFLYPLMQGYDSVAL----NADLELGGTDQKFNLLVGR 216

Query: 211 DLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADV 269
           +L ++    +   LT PLL    G  KM K+    + ++++   P + +    +I D  +
Sbjct: 217 ELQKQYGQEQQCILTMPLLEGLDGVEKMSKSKGNYVGISEK---PNDMFGKLMSISDVLM 273

Query: 270 VSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECF 327
             + + L+   + EI   R A   G+   + K ++A EI    H + +AE+    A+E F
Sbjct: 274 WRYFELLSFRSLDEIAQFRGAIEGGRNPRDFKVMLAQEIVARFHSQTDAER----ALEDF 329

Query: 328 DMSIH---SQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSII 384
           +          +P+++++   ++ G     L+ +AG   ST+EA R+++   +KI+ + +
Sbjct: 330 NHRAKGGVPDDIPSVTLAGAPLAIGQ----LLKQAGLVPSTSEALRNIEQGGVKIDGATV 385

Query: 385 SNEKLQIKLQDF 396
           S++ L++   +F
Sbjct: 386 SDKALKVDAGEF 397


>gi|206602818|gb|EDZ39299.1| Tyrosyl-tRNA synthetase [Leptospirillum sp. Group II '5-way CG']
          Length = 403

 Score =  117 bits (292), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 94/353 (26%), Positives = 166/353 (47%), Gaps = 22/353 (6%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D T+  LH GH   L  L   Q  GH    ++G  T+ IGDP+ R E R+ +  ++I 
Sbjct: 49  GFDPTSPDLHLGHFVLLKKLRQFQDMGHLVQFVVGDFTAFIGDPTGRSEIRKPISPEQIA 108

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           EN +  +      +K    KT  +   N +W+  +  +D L  +    +V R L  +  +
Sbjct: 109 ENAKTYERQVFRVLK--QEKTQVVF--NSSWMKKLG-VDGLVRLAGLQTVARFLERDDFQ 163

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R+     +   E  Y ++Q YD V L  +    +++GGSDQ  N++ G DL  + +   
Sbjct: 164 KRMNERLPIHLHELLYPLMQGYDSVVLESD----VELGGSDQLFNLLVGRDLLRQHQKEP 219

Query: 221 LFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTL 279
              LT PLL    G  KM K+L  A+ L     SP   +    +I D+ + S+   LT L
Sbjct: 220 QAVLTLPLLVGLDGEKKMSKSLRNAVALE---DSPDEMFGRLMSIPDSLIASYTTLLTDL 276

Query: 280 PMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI 339
              + D  ++L  +   +AK  +A  + +  HG + A +A  +  + F      + +P  
Sbjct: 277 ---DPDANSQLHPR---DAKVYMARSVVSQFHGEDNANRAIASFEKVFSRKELPEEIPVF 330

Query: 340 SISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
            + + E  R   L T++V++G A S ++A++ ++  A+  N   + +  + I+
Sbjct: 331 HVREGERVR---LSTVMVQSGAAKSESQAKQLIRQGAVDWNGETVQDPFMMIE 380


>gi|139438885|ref|ZP_01772345.1| Hypothetical protein COLAER_01349 [Collinsella aerofaciens ATCC
           25986]
 gi|133775596|gb|EBA39416.1| Hypothetical protein COLAER_01349 [Collinsella aerofaciens ATCC
           25986]
          Length = 403

 Score =  117 bits (292), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 95/380 (25%), Positives = 174/380 (45%), Gaps = 35/380 (9%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D T+  LH GH   L  +   Q  GH    ++G GT++IGDPS ++ +R  +  ++I
Sbjct: 38  LGVDPTSPDLHLGHAVPLRKMRQFQDLGHNVTLIIGNGTALIGDPSGKNSTRPQLSQEQI 97

Query: 100 QENIEKIKGIFSSFIKYGTGKTDA---LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSF 156
           + N E       +++       D     +++N  W+ S+    LL ++ S F+V R+L  
Sbjct: 98  EANAE-------TYVSQAMKILDPEKTTIVHNGDWILSMDLAGLL-QVCSKFTVARILER 149

Query: 157 ESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL 216
           +    R + +  ++  EF Y ++QA+D V++  +    ++MGG+DQ  N++ G +L E++
Sbjct: 150 DDFTKRYQSQTPIALHEFLYPVMQAFDSVQIKAD----VEMGGTDQLFNLLAGRELMEKM 205

Query: 217 KTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKR 275
                 ALT PLL    G  KM K+    I L     +P + +    +I D  +  + + 
Sbjct: 206 GMEPQIALTMPLLEGTDGVRKMSKSYGNYIGLTD---APKDMFGKTMSIPDEMIGKYYRL 262

Query: 276 LTTLPMSEIDRM-AKLQGKEIN--EAKKIIATEITTMVHGREEAEKAATAAMECFD---- 328
            ++L  +E+D++ A L     +  E K+ +  ++    HG    ++A       F     
Sbjct: 263 ASSLTPAEVDKIDAALADGSADPYELKRALGRDLCDTYHGAGAGDEAQAEFDRVFKEGQL 322

Query: 329 MSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEK 388
                +H+      + ++     L  L+   G + S  +ARR +    +KIN   ++ + 
Sbjct: 323 ADFPEKHVELTVNDEGQIY----LAGLLKDLGLSASAGQARRDIDGGGVKINGKAVAPKS 378

Query: 389 LQI-----KLQDFDSTGNIK 403
             I     KL D  S G  K
Sbjct: 379 YNIDPSALKLGDTLSVGKRK 398


>gi|91785169|ref|YP_560375.1| tyrosyl-tRNA synthetase [Burkholderia xenovorans LB400]
 gi|91689123|gb|ABE32323.1| tyrosyl-tRNA synthetase [Burkholderia xenovorans LB400]
          Length = 416

 Score =  117 bits (292), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 99/364 (27%), Positives = 181/364 (49%), Gaps = 28/364 (7%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  +  LQ  GH  I L+G  TS+IGDPS R+ +R  +  ++I
Sbjct: 58  LGLDPTAPDIHIGHTVVLNKMRQLQDLGHTVIFLIGDFTSLIGDPSGRNATRPPLTREQI 117

Query: 100 QENIEKIKGIF-SSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
           + N    K  F  + +     KT+  +  N  W   +   D + ++ S ++V R+L  E 
Sbjct: 118 ESN---AKTYFEQAALVLDRDKTE--IRYNSEWSMPLG-ADGMIKLASRYTVARILERED 171

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
              R +    +S  EF Y ++Q YD V L    +  L++GG+DQ  N++ G +L ++   
Sbjct: 172 FTRRFQSGVPISIHEFLYPLMQGYDSVAL----NADLELGGTDQKFNLLVGRELQKQYGQ 227

Query: 219 PKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT 277
            +   LT PLL    G  KM K+ +  I ++++   P + +    +I D  +  + + L+
Sbjct: 228 EQQCILTMPLLEGLDGVEKMSKSKNNYIGISEK---PTDMFGKLMSISDVLMWRYFELLS 284

Query: 278 TLPMSEIDRMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIH--- 332
             PM EI    K    G+   + K ++  EI    H + +AE+    A+E F+       
Sbjct: 285 FRPMEEIAGFKKETEAGRNPRDFKVMLGQEIVARFHSQADAER----ALEDFNHRAKGGV 340

Query: 333 SQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
              +P ++++   ++ G     L+ +A  A ST+EA R+++   +KI+ + +S++ L+++
Sbjct: 341 PDDIPAVTLAGAPLAIGQ----LLKQANLAPSTSEALRNIEQGGVKIDGATVSDKGLKVE 396

Query: 393 LQDF 396
             ++
Sbjct: 397 AGEY 400


>gi|304310529|ref|YP_003810127.1| Tyrosyl-tRNA synthetase, class Ib [gamma proteobacterium HdN1]
 gi|301796262|emb|CBL44470.1| Tyrosyl-tRNA synthetase, class Ib [gamma proteobacterium HdN1]
          Length = 404

 Score =  117 bits (292), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 100/386 (25%), Positives = 173/386 (44%), Gaps = 27/386 (6%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           K     IL E   I ++   R L I           G+D TA  LH GH   +  L   Q
Sbjct: 16  KRGVFEILLEAELIEKLRQGRPLKIKA---------GFDPTAPDLHLGHTVLINKLKVFQ 66

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKG-IFSSFIKYGTGKTDA 123
             GH+   L+G  T +IGDPS ++++R  +  +++  N +  +  IF    +  T     
Sbjct: 67  DLGHEIYFLIGDFTGMIGDPSGKNQTRPPLSVEQVMANAKTYEDQIFKILDREKTK---- 122

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            ++ N  WL  +    L+R + S  +V RML  +    R K EQ ++  EF Y ++Q YD
Sbjct: 123 -VVFNSAWLEKLGAAGLIR-LASNQTVARMLERDDFSKRYKAEQPIAIHEFLYPLIQGYD 180

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLS 242
            V L    +  ++MGG+DQ  N++ G +L +         +  PLL    G  KM K+L 
Sbjct: 181 SVAL----EADVEMGGTDQRFNLLMGRELQKASGQAPQTVIMVPLLEGLDGVQKMSKSLG 236

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKK 300
             + +N    +P   +    ++ D+ +  + + L+   + EI   R     G      K+
Sbjct: 237 NYVGIN---DAPGEMYTKLLSVPDSLMWRYFELLSFRTVEEIADFRRQVDSGSSPQAFKQ 293

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           ++A EI    HG   A+ A   A   FD     + MP I +   +   G+ ++     A 
Sbjct: 294 LLAEEIIARFHGESAAQAAKRGAGNRFDWGDAPEDMPEIELVAPD-GAGVPVVNAAKAAA 352

Query: 361 FATSTNEARRHLKSNAIKINNSIISN 386
             ++T +AR  ++ +A+++   ++S+
Sbjct: 353 LVSTTTQARSFVQQSALRVGGRVVSD 378


>gi|167825777|ref|ZP_02457248.1| tyrosyl-tRNA synthetase [Burkholderia pseudomallei 9]
 gi|254180683|ref|ZP_04887281.1| tyrosyl-tRNA synthetase [Burkholderia pseudomallei 1655]
 gi|184211222|gb|EDU08265.1| tyrosyl-tRNA synthetase [Burkholderia pseudomallei 1655]
          Length = 413

 Score =  117 bits (292), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 99/364 (27%), Positives = 179/364 (49%), Gaps = 28/364 (7%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  +  LQ  GH  I L+G  TS+IGDPS R+ +R  +  ++I
Sbjct: 55  LGLDPTAPDIHLGHTVVLNKMRQLQDLGHTVIFLIGDFTSLIGDPSGRNATRPPLTREQI 114

Query: 100 QENIEKIKGIF-SSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
           + N    K  F  + +     KT+  +  N  W   +   D + ++ S ++V RML  E 
Sbjct: 115 ESN---AKTYFEQAALVLDRAKTE--IRYNSEWSMPLG-ADGMIKLASRYTVARMLERED 168

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
              R +    +S  EF Y ++Q YD V L    +  L++GG+DQ  N++ G +L ++   
Sbjct: 169 FTKRFQGGIPISIHEFLYPLMQGYDSVAL----NADLELGGTDQKFNLLVGRELQKQYGQ 224

Query: 219 PKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT 277
            +   LT PLL    G  KM K+    + ++++   P + +    +I D  +  + + L+
Sbjct: 225 EQQCILTMPLLEGLDGVEKMSKSKGNYVGISEK---PTDMFGKLMSISDVLMWRYFELLS 281

Query: 278 TLPMSEIDRM--AKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIH--- 332
              + EI R       G+   + K ++A EI    H + +AE+    A+E F+       
Sbjct: 282 FRSLDEIARFRGEAEGGRNPRDFKVMLAQEIVARFHSQADAER----ALEDFNHRAKGGV 337

Query: 333 SQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
              +P ++++   ++ G     L+ +AG   ST+EA R+++   +KI+ + +S++ L++ 
Sbjct: 338 PDDIPAVTLAGAPLAIGQ----LLKQAGLVPSTSEALRNIEQGGVKIDGATVSDKALKVD 393

Query: 393 LQDF 396
             +F
Sbjct: 394 AGEF 397


>gi|134280550|ref|ZP_01767261.1| tyrosyl-tRNA synthetase [Burkholderia pseudomallei 305]
 gi|237813770|ref|YP_002898221.1| tyrosine--tRNA ligase [Burkholderia pseudomallei MSHR346]
 gi|134248557|gb|EBA48640.1| tyrosyl-tRNA synthetase [Burkholderia pseudomallei 305]
 gi|237503099|gb|ACQ95417.1| tyrosine--tRNA ligase [Burkholderia pseudomallei MSHR346]
          Length = 435

 Score =  117 bits (292), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 99/364 (27%), Positives = 179/364 (49%), Gaps = 28/364 (7%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  +  LQ  GH  I L+G  TS+IGDPS R+ +R  +  ++I
Sbjct: 77  LGLDPTAPDIHLGHTVVLNKMRQLQDLGHTVIFLIGDFTSLIGDPSGRNATRPPLTREQI 136

Query: 100 QENIEKIKGIF-SSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
           + N    K  F  + +     KT+  +  N  W   +   D + ++ S ++V RML  E 
Sbjct: 137 ESN---AKTYFEQAALVLDRAKTE--IRYNSEWSMPLG-ADGMIKLASRYTVARMLERED 190

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
              R +    +S  EF Y ++Q YD V L    +  L++GG+DQ  N++ G +L ++   
Sbjct: 191 FTKRFQGGIPISIHEFLYPLMQGYDSVAL----NADLELGGTDQKFNLLVGRELQKQYGQ 246

Query: 219 PKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT 277
            +   LT PLL    G  KM K+    + ++++   P + +    +I D  +  + + L+
Sbjct: 247 EQQCILTMPLLEGLDGVEKMSKSKGNYVGISEK---PTDMFGKLMSISDVLMWRYFELLS 303

Query: 278 TLPMSEIDRM--AKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIH--- 332
              + EI R       G+   + K ++A EI    H + +AE+    A+E F+       
Sbjct: 304 FRSLDEIARFRGEAEGGRNPRDFKVMLAQEIVARFHSQADAER----ALEDFNHRAKGGV 359

Query: 333 SQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
              +P ++++   ++ G     L+ +AG   ST+EA R+++   +KI+ + +S++ L++ 
Sbjct: 360 PDDIPAVTLAGAPLAIGQ----LLKQAGLVPSTSEALRNIEQGGVKIDGATVSDKALKVD 415

Query: 393 LQDF 396
             +F
Sbjct: 416 AGEF 419


>gi|254191511|ref|ZP_04898014.1| tyrosyl-tRNA synthetase [Burkholderia pseudomallei Pasteur 52237]
 gi|254260989|ref|ZP_04952043.1| tyrosine--tRNA ligase [Burkholderia pseudomallei 1710a]
 gi|115305797|sp|Q3JNS0|SYY_BURP1 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|157939182|gb|EDO94852.1| tyrosyl-tRNA synthetase [Burkholderia pseudomallei Pasteur 52237]
 gi|254219678|gb|EET09062.1| tyrosine--tRNA ligase [Burkholderia pseudomallei 1710a]
          Length = 413

 Score =  117 bits (292), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 101/364 (27%), Positives = 180/364 (49%), Gaps = 28/364 (7%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  +  LQ  GH  I L+G  TS+IGDPS R+ +R  +  ++I
Sbjct: 55  LGLDPTAPDIHLGHTVVLNKMRQLQDLGHTVIFLIGDFTSLIGDPSGRNATRPPLTREQI 114

Query: 100 QENIEKIKGIF-SSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
           + N    K  F  + +     KT+  +  N  W   +   D + ++ S ++V RML  E 
Sbjct: 115 ESN---AKTYFEQAALVLDRAKTE--IRYNSEWSMPLG-ADGMIKLASRYTVARMLERED 168

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
              R +    +S  EF Y ++Q YD V L  N D  L++GG+DQ  N++ G +L ++   
Sbjct: 169 FTKRFQGGIPISIHEFLYPLMQGYDSVAL--NAD--LELGGTDQKFNLLVGRELQKQYGQ 224

Query: 219 PKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT 277
            +   LT PLL    G  KM K+    + ++++   P + +    +I D  +  + + L+
Sbjct: 225 EQQCILTMPLLEGLDGVEKMSKSKGNYVGISEK---PTDMFGKLMSISDVLMWRYFELLS 281

Query: 278 TLPMSEIDRM--AKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIH--- 332
              + EI R       G+   + K ++A EI    H + +AE+    A+E F+       
Sbjct: 282 FRSLDEIARFRGEAEGGRNPRDFKVMLAQEIVARFHSQADAER----ALEDFNHRAKGGV 337

Query: 333 SQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
              +P ++++   ++ G     L+ +AG   ST+EA R+++   +KI+ + +S++ L++ 
Sbjct: 338 PDDIPAVTLAGAPLAIGQ----LLKQAGLVPSTSEALRNIEQGGVKIDGATVSDKALKVD 393

Query: 393 LQDF 396
             +F
Sbjct: 394 AGEF 397


>gi|294507638|ref|YP_003571696.1| tyrosyl-tRNA synthetase [Salinibacter ruber M8]
 gi|294343966|emb|CBH24744.1| tyrosyl-tRNA synthetase [Salinibacter ruber M8]
          Length = 412

 Score =  117 bits (292), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 95/385 (24%), Positives = 178/385 (46%), Gaps = 33/385 (8%)

Query: 10  SILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
            I+ E     ++   RE D       +T  +G D +   LH GH   L  L   Q  GH+
Sbjct: 19  EIVPEDELAEKLRTSRETDT-----PLTVKLGCDPSRPDLHLGHTVVLRKLRQFQDFGHR 73

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA---LML 126
            + ++G  T +IGDPS R ++R  +  +E +E+ +       S+ +  T   D     + 
Sbjct: 74  AVLIVGDFTGMIGDPSGRSKTRPQLTLEETREHGQ-------SYYEQATRVLDPNKTEIR 126

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
            N  WL  +++ D++ E+ +  +V +ML  +    R +  Q +S  EF Y + QA D V 
Sbjct: 127 YNSEWLDEMRFSDVI-ELAAQQTVAQMLKRDDFNERYEAGQPISLHEFLYPLAQARDSVH 185

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAI 245
           +  +    +++GG+DQ  N++    L E         +  PLL    G+ KM K+L  AI
Sbjct: 186 IEAD----VELGGTDQRFNLLLARRLQEANDQAAQVCMMLPLLEGTDGSDKMSKSLDNAI 241

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
            + +   +P + +    ++ D  +  + + +T +P  ++ ++ +        AK  +A  
Sbjct: 242 GIAE---APEDMYGKTMSVPDDLIYRYVELVTDIPTEQLPKVKRFAESNPRAAKAQLARR 298

Query: 306 ITTMVHGREEAEKAATAAMECFDMSI----HSQHMPTISISKDEVSRGMGLLTLIVKAGF 361
           I  M HG    E+AA  A E F+ ++        +P  + + ++ +  +GLL L+  A  
Sbjct: 299 IVEMYHG----EEAADRAEEHFEQTVVEGGVPDDLPEYTPTPEDGAE-VGLLNLMRHADL 353

Query: 362 ATSTNEARRHLKSNAIKINNSIISN 386
             S +E RR ++  A+ I+   +++
Sbjct: 354 TDSNSEGRRMIEQGAVTIDEEKVTD 378


>gi|226198405|ref|ZP_03793974.1| tyrosine--tRNA ligase [Burkholderia pseudomallei Pakistan 9]
 gi|225929588|gb|EEH25606.1| tyrosine--tRNA ligase [Burkholderia pseudomallei Pakistan 9]
          Length = 460

 Score =  117 bits (292), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 101/364 (27%), Positives = 180/364 (49%), Gaps = 28/364 (7%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  +  LQ  GH  I L+G  TS+IGDPS R+ +R  +  ++I
Sbjct: 102 LGLDPTAPDIHLGHTVVLNKMRQLQDLGHTVIFLIGDFTSLIGDPSGRNATRPPLTREQI 161

Query: 100 QENIEKIKGIF-SSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
           + N    K  F  + +     KT+  +  N  W   +   D + ++ S ++V RML  E 
Sbjct: 162 ESN---AKTYFEQAALVLDRAKTE--IRYNSEWSMPLG-ADGMIKLASRYTVARMLERED 215

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
              R +    +S  EF Y ++Q YD V L  N D  L++GG+DQ  N++ G +L ++   
Sbjct: 216 FTKRFQGGIPISIHEFLYPLMQGYDSVAL--NAD--LELGGTDQKFNLLVGRELQKQYGQ 271

Query: 219 PKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT 277
            +   LT PLL    G  KM K+    + ++++   P + +    +I D  +  + + L+
Sbjct: 272 EQQCILTMPLLEGLDGVEKMSKSKGNYVGISEK---PTDMFGKLMSISDVLMWRYFELLS 328

Query: 278 TLPMSEIDRM--AKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIH--- 332
              + EI R       G+   + K ++A EI    H + +AE+    A+E F+       
Sbjct: 329 FRSLDEIARFRGEAEGGRNPRDFKVMLAQEIVARFHSQADAER----ALEDFNHRAKGGV 384

Query: 333 SQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
              +P ++++   ++ G     L+ +AG   ST+EA R+++   +KI+ + +S++ L++ 
Sbjct: 385 PDDIPAVTLAGAPLAIGQ----LLKQAGLVPSTSEALRNIEQGGVKIDGATVSDKALKVD 440

Query: 393 LQDF 396
             +F
Sbjct: 441 AGEF 444


>gi|30249402|ref|NP_841472.1| tyrosyl-tRNA synthetase [Nitrosomonas europaea ATCC 19718]
 gi|75540516|sp|Q82UQ1|SYY_NITEU RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|30138765|emb|CAD85342.1| t-RNA synthetase, class Ib [Nitrosomonas europaea ATCC 19718]
          Length = 409

 Score =  117 bits (292), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 98/380 (25%), Positives = 172/380 (45%), Gaps = 26/380 (6%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           +L E  F  +++  R L +           G+D TA  LH GH   L  L  LQ  GH  
Sbjct: 19  LLIEEEFAQKLAQGRPLRVKA---------GFDPTAPDLHLGHTVLLNKLRQLQDLGHHI 69

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           + L+G  T +IGDPS +  +R  +  ++I +N +         +K    +T+ +   N +
Sbjct: 70  LFLIGDFTGMIGDPSGKSATRPPLTREQITQNADTYASQVFKILK--PEQTEVVF--NSS 125

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           W+      D++R + + ++V RML  +    R    + ++  EF Y ++Q YD V L  +
Sbjct: 126 WMDKFSAADVIR-LAATYTVARMLERDDFSKRYHENRPIAIHEFLYPLVQGYDSVALKAD 184

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNK 249
               L++GG+DQ  N++ G +L +    P    LT PLL    G  KM K+L+  + +N+
Sbjct: 185 ----LELGGTDQKFNLLVGRELQKHYGQPPQCILTMPLLEGLDGIQKMSKSLNNYVGINE 240

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATEIT 307
              SP   +    ++ D  +  + + L+   +  + +       G    E K   A EI 
Sbjct: 241 ---SPAEIFGKLMSVSDTLMWRYIELLSFESLETVRQWQNEVESGCNPREIKMRFAREIV 297

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
              H + +A +AA      F   +    +P   +   +   G+ L  L+  AG   ST+E
Sbjct: 298 ARFHSQTDAVRAAEEFEARFSKGVIPDDIPEKKLYIQDA--GLALPQLLKLAGLTASTSE 355

Query: 368 ARRHLKSNAIKINNSIISNE 387
           A R ++   +K+N   +S++
Sbjct: 356 ALRMIEQGGVKLNGDKVSDK 375


>gi|53726205|ref|YP_103906.1| tyrosyl-tRNA synthetase [Burkholderia mallei ATCC 23344]
 gi|67642310|ref|ZP_00441068.1| tyrosine--tRNA ligase [Burkholderia mallei GB8 horse 4]
 gi|121598440|ref|YP_991612.1| tyrosyl-tRNA synthetase [Burkholderia mallei SAVP1]
 gi|124383776|ref|YP_001027108.1| tyrosyl-tRNA synthetase [Burkholderia mallei NCTC 10229]
 gi|126449804|ref|YP_001082053.1| tyrosyl-tRNA synthetase [Burkholderia mallei NCTC 10247]
 gi|167000498|ref|ZP_02266310.1| tyrosine--tRNA ligase [Burkholderia mallei PRL-20]
 gi|167721181|ref|ZP_02404417.1| tyrosyl-tRNA synthetase [Burkholderia pseudomallei DM98]
 gi|167895847|ref|ZP_02483249.1| tyrosyl-tRNA synthetase [Burkholderia pseudomallei 7894]
 gi|167920449|ref|ZP_02507540.1| tyrosyl-tRNA synthetase [Burkholderia pseudomallei BCC215]
 gi|217420944|ref|ZP_03452449.1| tyrosine--tRNA ligase [Burkholderia pseudomallei 576]
 gi|254178767|ref|ZP_04885421.1| tyrosyl-tRNA synthetase [Burkholderia mallei ATCC 10399]
 gi|254202618|ref|ZP_04908981.1| tyrosyl-tRNA synthetase [Burkholderia mallei FMH]
 gi|254207957|ref|ZP_04914307.1| tyrosyl-tRNA synthetase [Burkholderia mallei JHU]
 gi|254355903|ref|ZP_04972181.1| tyrosyl-tRNA synthetase [Burkholderia mallei 2002721280]
 gi|81604347|sp|Q62HB4|SYY_BURMA RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|52429628|gb|AAU50221.1| tyrosyl-tRNA synthetase [Burkholderia mallei ATCC 23344]
 gi|121227250|gb|ABM49768.1| tyrosyl-tRNA synthetase [Burkholderia mallei SAVP1]
 gi|124291796|gb|ABN01065.1| tyrosine--tRNA ligase [Burkholderia mallei NCTC 10229]
 gi|126242674|gb|ABO05767.1| tyrosine--tRNA ligase [Burkholderia mallei NCTC 10247]
 gi|147746865|gb|EDK53942.1| tyrosyl-tRNA synthetase [Burkholderia mallei FMH]
 gi|147751851|gb|EDK58918.1| tyrosyl-tRNA synthetase [Burkholderia mallei JHU]
 gi|148024878|gb|EDK83056.1| tyrosyl-tRNA synthetase [Burkholderia mallei 2002721280]
 gi|160694681|gb|EDP84689.1| tyrosyl-tRNA synthetase [Burkholderia mallei ATCC 10399]
 gi|217396356|gb|EEC36373.1| tyrosine--tRNA ligase [Burkholderia pseudomallei 576]
 gi|238523438|gb|EEP86876.1| tyrosine--tRNA ligase [Burkholderia mallei GB8 horse 4]
 gi|243063553|gb|EES45739.1| tyrosine--tRNA ligase [Burkholderia mallei PRL-20]
          Length = 413

 Score =  116 bits (291), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 101/372 (27%), Positives = 180/372 (48%), Gaps = 44/372 (11%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  +  LQ  GH  I L+G  TS+IGDPS R+ +R  +  ++I
Sbjct: 55  LGLDPTAPDIHLGHTVVLNKMRQLQDLGHTVIFLIGDFTSLIGDPSGRNATRPPLTREQI 114

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKY---------IDLLREIGSFFSV 150
           + N    K  F         +  AL+L+ E     I+Y          D + ++ S ++V
Sbjct: 115 ESN---AKTYF---------EQAALVLDREK--TEIRYNSEWSMPLGADGMIKLASRYTV 160

Query: 151 NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGI 210
            RML  E    R +    +S  EF Y ++Q YD V L    +  L++GG+DQ  N++ G 
Sbjct: 161 ARMLEREDFTKRFQGGIPISIHEFLYPLMQGYDSVAL----NADLELGGTDQKFNLLVGR 216

Query: 211 DLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADV 269
           +L ++    +   LT PLL    G  KM K+    + ++++   P + +    +I D  +
Sbjct: 217 ELQKQYGQEQQCILTMPLLEGLDGVEKMSKSKGNYVGISEK---PTDMFGKLMSISDVLM 273

Query: 270 VSFAKRLTTLPMSEIDRM--AKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECF 327
             + + L+   + EI R       G+   + K ++A EI    H + +AE+    A+E F
Sbjct: 274 WRYFELLSFRSLDEIARFRGEAEGGRNPRDFKVMLAQEIVARFHSQADAER----ALEDF 329

Query: 328 DMSIH---SQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSII 384
           +          +P ++++   ++ G     L+ +AG   ST+EA R+++   +KI+ + +
Sbjct: 330 NHRAKGGVPDDIPAVTLAGAPLAIGQ----LLKQAGLVPSTSEALRNIEQGGVKIDGATV 385

Query: 385 SNEKLQIKLQDF 396
           S++ L++   +F
Sbjct: 386 SDKALKVDAGEF 397


>gi|262371199|ref|ZP_06064520.1| tyrosyl-tRNA synthetase [Acinetobacter johnsonii SH046]
 gi|262313929|gb|EEY94975.1| tyrosyl-tRNA synthetase [Acinetobacter johnsonii SH046]
          Length = 410

 Score =  116 bits (291), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 97/378 (25%), Positives = 167/378 (44%), Gaps = 24/378 (6%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           I+SE   + ++   R L I           G+D TA  LH GH   +  L   Q  GH  
Sbjct: 27  IISEEDLLKKLKENRPLKIKA---------GFDPTAPDLHLGHTVLINKLKTFQDLGHDV 77

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
             L+G  T++IGDP+ +  +R  +  +++ EN +  +     F      KT      N  
Sbjct: 78  TFLIGDYTAMIGDPTGKSATRPPLSREQVLENAKTYQE--QVFKILDPNKTKVRF--NSE 133

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           W       DL+ ++ S  +V RML  +    R    Q ++  EF Y ++Q YD + L   
Sbjct: 134 WFAEKTAADLI-QLASQQTVARMLERDDFTKRYNNHQPIAIHEFLYPLVQGYDSIAL--- 189

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNK 249
            +  +++GG+DQ  N++ G  L  R        +T P+L    G  KM K+L   I +  
Sbjct: 190 -EADVELGGTDQTFNLLMGRTLQGRYDQEAQVCITVPILEGLDGVNKMSKSLGNYIGV-- 246

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATEIT 307
              +P   +Q   ++ DA +  +   L+   + +I  + K   +G+   E KKI+A E+ 
Sbjct: 247 -FDAPGAMYQKVLSMPDALIERYFDLLSFKSVEDIKVLLKEIAEGRNPQEVKKILALELV 305

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
              HG E AE A   A          +  P ++IS+ E    + + T++  AG   +   
Sbjct: 306 ERFHGAEAAENAHKGAGNLITEGELPEGTPEVTISRAEFGGELFIATILRVAGLNPNAAA 365

Query: 368 ARRHLKSNAIKINNSIIS 385
           A+  +   A+K++ +++ 
Sbjct: 366 AKDAVGRGAVKVDWNVVD 383


>gi|146308941|ref|YP_001189406.1| tyrosyl-tRNA synthetase [Pseudomonas mendocina ymp]
 gi|145577142|gb|ABP86674.1| tyrosyl-tRNA synthetase [Pseudomonas mendocina ymp]
          Length = 399

 Score =  116 bits (291), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 93/347 (26%), Positives = 161/347 (46%), Gaps = 18/347 (5%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   +  L   Q+ GH+ I L+G  T +IGDPS +  +R  +  +++ 
Sbjct: 39  GFDPTAPDLHLGHTVLINKLRQFQELGHQVIFLIGDFTGMIGDPSGKSATRPPLTREQVL 98

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           +N E  K     F      KT+     N TW+  +K  D +R + S ++V RML  +   
Sbjct: 99  DNAETYKQ--QVFKILDPAKTEVAF--NSTWMDQLKPADFIR-LASQYTVARMLERDDFD 153

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R    Q ++  EF Y ++Q YD V L  +    +++GG+DQ  N++ G +L        
Sbjct: 154 KRYTSNQPIAIHEFLYPLVQGYDSVALKAD----VELGGTDQKFNLLMGRELQRAYGQES 209

Query: 221 LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTL 279
              +T PLL    G  KM K+L   + + +   +P   +    ++ DA +  + + L+  
Sbjct: 210 QCIVTMPLLEGLDGVKKMSKSLGNYVGIQE---APGVMYSKLVSMPDALMWRYFELLSFR 266

Query: 280 PMSEIDRMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMP 337
            M EI++  +   QG    + K  +A E+    HG E A  A  +A          + +P
Sbjct: 267 SMEEIEQFKRDVQQGANPRDIKIKLAEELVARFHGEEAAANAHRSAGNRMRDGELPEDLP 326

Query: 338 TISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSII 384
            + +   E    M + +++ KAG   +   AR  L S  ++++  ++
Sbjct: 327 EVELVSAE---DMPISSVLNKAGLVKNAAVARDLLGSGGVRVDGEVV 370


>gi|53720512|ref|YP_109498.1| tyrosyl-tRNA synthetase [Burkholderia pseudomallei K96243]
 gi|126453181|ref|YP_001067643.1| tyrosyl-tRNA synthetase [Burkholderia pseudomallei 1106a]
 gi|167817370|ref|ZP_02449050.1| tyrosyl-tRNA synthetase [Burkholderia pseudomallei 91]
 gi|167847260|ref|ZP_02472768.1| tyrosyl-tRNA synthetase [Burkholderia pseudomallei B7210]
 gi|167912498|ref|ZP_02499589.1| tyrosyl-tRNA synthetase [Burkholderia pseudomallei 112]
 gi|242315664|ref|ZP_04814680.1| tyrosine--tRNA ligase [Burkholderia pseudomallei 1106b]
 gi|254194849|ref|ZP_04901279.1| tyrosyl-tRNA synthetase [Burkholderia pseudomallei S13]
 gi|254299232|ref|ZP_04966682.1| tyrosyl-tRNA synthetase [Burkholderia pseudomallei 406e]
 gi|81379101|sp|Q63QX0|SYY_BURPS RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|52210926|emb|CAH36914.1| tyrosyl-tRNA synthetase [Burkholderia pseudomallei K96243]
 gi|126226823|gb|ABN90363.1| tyrosyl-tRNA synthetase [Burkholderia pseudomallei 1106a]
 gi|157809052|gb|EDO86222.1| tyrosyl-tRNA synthetase [Burkholderia pseudomallei 406e]
 gi|169651598|gb|EDS84291.1| tyrosyl-tRNA synthetase [Burkholderia pseudomallei S13]
 gi|242138903|gb|EES25305.1| tyrosine--tRNA ligase [Burkholderia pseudomallei 1106b]
          Length = 413

 Score =  116 bits (291), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 101/372 (27%), Positives = 180/372 (48%), Gaps = 44/372 (11%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  +  LQ  GH  I L+G  TS+IGDPS R+ +R  +  ++I
Sbjct: 55  LGLDPTAPDIHLGHTVVLNKMRQLQDLGHTVIFLIGDFTSLIGDPSGRNATRPPLTREQI 114

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKY---------IDLLREIGSFFSV 150
           + N    K  F         +  AL+L+ E     I+Y          D + ++ S ++V
Sbjct: 115 ESN---AKTYF---------EQAALVLDREK--TEIRYNSEWSMPLGADGMIKLASRYTV 160

Query: 151 NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGI 210
            RML  E    R +    +S  EF Y ++Q YD V L    +  L++GG+DQ  N++ G 
Sbjct: 161 ARMLEREDFTKRFQGGIPISIHEFLYPLMQGYDSVAL----NADLELGGTDQKFNLLVGR 216

Query: 211 DLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADV 269
           +L ++    +   LT PLL    G  KM K+    + ++++   P + +    +I D  +
Sbjct: 217 ELQKQYGQEQQCILTMPLLEGLDGVEKMSKSKGNYVGISEK---PTDMFGKLMSISDVLM 273

Query: 270 VSFAKRLTTLPMSEIDRM--AKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECF 327
             + + L+   + EI R       G+   + K ++A EI    H + +AE+    A+E F
Sbjct: 274 WRYFELLSFRSLDEIARFRGEAEGGRNPRDFKVMLAQEIVARFHSQADAER----ALEDF 329

Query: 328 DMSIH---SQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSII 384
           +          +P ++++   ++ G     L+ +AG   ST+EA R+++   +KI+ + +
Sbjct: 330 NHRAKGGVPDDIPAVTLAGAPLAIGQ----LLKQAGLVPSTSEALRNIEQGGVKIDGATV 385

Query: 385 SNEKLQIKLQDF 396
           S++ L++   +F
Sbjct: 386 SDKALKVDAGEF 397


>gi|322515509|ref|ZP_08068495.1| tyrosine--tRNA ligase [Actinobacillus ureae ATCC 25976]
 gi|322118476|gb|EFX90727.1| tyrosine--tRNA ligase [Actinobacillus ureae ATCC 25976]
          Length = 396

 Score =  116 bits (291), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 101/380 (26%), Positives = 172/380 (45%), Gaps = 29/380 (7%)

Query: 10  SILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
           +I SE   I ++   R L +          +G D TA  +H GH   L  L   Q+ GH+
Sbjct: 18  NIYSEEDLIEKLKENRPLRV---------KLGADPTAPDIHLGHTVVLNKLRQFQQLGHE 68

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
            I L+G  T ++GDPS ++ +R  +  +++  N E  K       K        +  N+E
Sbjct: 69  VIFLIGDFTGMVGDPSGKNSTRPPLTREDVLRNAETYK---QQLFKILDPNKTRVAFNSE 125

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
            WL  +    ++R + S ++V RML  +  + R    QS++  EF Y +LQ +D V L  
Sbjct: 126 -WLGKLGTEGMIR-LASNYTVARMLERDDFKKRFANNQSIAIHEFIYPLLQGHDSVAL-- 181

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLN 248
             +  +++GG+DQ  N++ G +L +        A+T PLL    G  KM K+L   I + 
Sbjct: 182 --EADVELGGTDQTFNLLVGRELQKSAGQKPQVAMTLPLLVGLDGEKKMSKSLGNYIGVT 239

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATEI 306
                P + +    +I D  +  +   L+  P+ EI ++      GK   + K ++A E+
Sbjct: 240 ---DVPSDMFGKVMSISDELMWDWYNLLSFRPLDEIAQLKADVAAGKNPRDVKILLAKEL 296

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
               H +  A+ A    +  F        MP  +   +     +GL TL+ +AG   ST+
Sbjct: 297 IARFHDQAAADAAEQEFINRFQKGGIPDEMPEFTFEGE-----IGLATLLKEAGLVASTS 351

Query: 367 EARRHLKSNAIKINNSIISN 386
           EA R  +   +KI+   + +
Sbjct: 352 EAIRSAQQGGVKIDGEKVED 371


>gi|257460766|ref|ZP_05625867.1| tyrosyl-tRNA synthetase [Campylobacter gracilis RM3268]
 gi|257442097|gb|EEV17239.1| tyrosyl-tRNA synthetase [Campylobacter gracilis RM3268]
          Length = 401

 Score =  116 bits (291), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 110/378 (29%), Positives = 181/378 (47%), Gaps = 34/378 (8%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA+ LH GH   L  L +LQ  G     L+G  T+ IGDP+ + E+R+ +  + +
Sbjct: 42  VGMDPTAADLHLGHAVVLNKLAFLQNHGAIVQFLIGDFTAQIGDPTGKSETRKKLAREIV 101

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
            +N +  +     F      KT  +M N+E W   +    ++ E+ S F+V RML  +  
Sbjct: 102 LQNAKTYEQ--QVFKILNPAKT-KVMFNSE-WTNRLGASGMI-ELSSTFNVARMLERDDF 156

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R K EQ +S  EF Y +LQ YD V +     C ++ GG+DQ  N++ G  L       
Sbjct: 157 EKRYKAEQPISISEFMYPLLQGYDSVCMK----CDIEFGGTDQKFNLLMGRQLQRIYDIG 212

Query: 220 KLFALT-SPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT 277
           K  ++   PLL    GT KM K+L   I +     +P++ +    +I DA +  +   L+
Sbjct: 213 KEQSVVMMPLLVGTDGTNKMSKSLGNYIGVT---DTPHDMYGKVMSISDALMWDWYNLLS 269

Query: 278 TLPMSEIDRM------AKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSI 331
                +I+ +        +  K + E    +A+EI T  +     E  A  A + FD   
Sbjct: 270 QKSSEDIELIKGFVADGSIHPKAVKEE---LASEIVTQFYD----ENTAFEAKQEFDRVH 322

Query: 332 HSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
            +  +P+  I +  VS    ++  ++    A S+++ARR +KSNA+ I+ + I +E+LQ+
Sbjct: 323 GAGELPS-EIKEYHVSSPAWIVKALISCKLAVSSSDARRLIKSNAVSIDQNKILDEQLQL 381

Query: 392 KLQDFDSTGNIKLSFGKK 409
                 S+G   L  GKK
Sbjct: 382 ------SSGEYTLQVGKK 393


>gi|152980601|ref|YP_001351992.1| tyrosyl-tRNA synthetase [Janthinobacterium sp. Marseille]
 gi|151280678|gb|ABR89088.1| tyrosyl-tRNA synthetase [Janthinobacterium sp. Marseille]
          Length = 413

 Score =  116 bits (291), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 106/374 (28%), Positives = 178/374 (47%), Gaps = 28/374 (7%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  LH GH   L  +  LQ  GH+ I L+G  TS+IGDPS R+ +R  +  ++I
Sbjct: 56  LGLDPTAPDLHLGHTVVLNKMRQLQDLGHQVIFLIGDFTSMIGDPSGRNITRPPLTKEQI 115

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           +EN    K  FS        +   +  N+E W C       + E+ + ++V R+L  E  
Sbjct: 116 EEN---AKTYFSQASLVLDPERTEIRYNSE-W-CDPLGARGMIELSAKYTVARILEREDF 170

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R K    +S  EF Y ++Q YD V L  +    L++GG+DQ  N++ G +L +     
Sbjct: 171 TKRFKANTPISLHEFLYPLMQGYDSVALQSD----LELGGTDQKFNLLVGRELQKSYGQE 226

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYN-FWQYWRNIDDADVVSFAKRLT 277
           +   LT PLL    G  KM K+    I +    T P N  +    +I D  +  + + L+
Sbjct: 227 QQCILTMPLLEGLDGVEKMSKSKGNYIGI----TEPGNTMFAKLMSISDVMMWRYYELLS 282

Query: 278 TLPMSEIDRMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQH 335
              +SEI +  K    G+   + K ++A EI    H  +  E A T  +      I    
Sbjct: 283 FRSLSEIAQFKKEVEGGRNPRDIKVLLAQEIVARFHSVQAGEDALTDFVNRSKGGI-PHD 341

Query: 336 MPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           +P +++S       +G+  L+ +A    ST+EA R ++   ++I+ ++IS++ L+++   
Sbjct: 342 IPEVALS----GAPLGIGQLLKQANLCASTSEALRMVEQGGVRIDGAVISDKGLKVE--- 394

Query: 396 FDSTGNIKLSFGKK 409
               G + +  GK+
Sbjct: 395 ---AGTLVVQVGKR 405


>gi|91070372|gb|ABE11286.1| tyrosyl-tRNA synthetase [uncultured Prochlorococcus marinus clone
           HF10-88H9]
          Length = 412

 Score =  116 bits (291), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 101/379 (26%), Positives = 179/379 (47%), Gaps = 28/379 (7%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D T +++H GH      L   Q  GH  + ++G  T+ IGDP+ ++++R  +  Q++
Sbjct: 46  LGIDPTGTNIHLGHSILFKKLRAFQDNGHIAVLIIGDFTAQIGDPTGKNKTRVQLSEQQV 105

Query: 100 QENIEKI-------KGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNR 152
           ++N +         K    S + + +     +  N+E WL  +    ++  +GS  +V++
Sbjct: 106 KDNAKTYLTQLGMGKPAIESILDFDSKDRIEIRYNSE-WLKGLNLNSIIDLMGS-STVSQ 163

Query: 153 MLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL 212
           ML+ E    R   +  +S  EF Y +LQ YD V +  +    +++GG+DQ  NI  G DL
Sbjct: 164 MLAKEEFNKRYTAQVPISLHEFLYPLLQGYDSVVVQSD----IELGGTDQKFNIAIGRDL 219

Query: 213 GERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVS 271
               K    F +  P+LT   G  KM K+    + L ++   P + +     + D  + +
Sbjct: 220 QRHFKQDPQFGVLLPILTGLDGVKKMSKSEFNTVGLTED---PLSMYSKLEKVPDNIIPT 276

Query: 272 FAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECF-DMS 330
           + + LT L +S       L+     E ++ +A E+TT+ HG EEA KA +   + F    
Sbjct: 277 YFELLTELDLS------FLENSNPRELQRRMALEVTTLFHGAEEALKAQSNCEKLFLGQK 330

Query: 331 IHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQ 390
                +P IS+   EV   +    L+       S++E++R +K   +KI++  + N  L 
Sbjct: 331 EKVGEIPDISLK--EVVFPVKFFYLLSALKLFKSSSESKRSIKGGGVKIDSQKVVNPDLV 388

Query: 391 IKLQDFDSTGNIKLSFGKK 409
              ++ D  G I L  GKK
Sbjct: 389 FNSKN-DLEGKI-LQIGKK 405


>gi|325294991|ref|YP_004281505.1| Tyrosyl-tRNA synthetase [Desulfurobacterium thermolithotrophum DSM
           11699]
 gi|325065439|gb|ADY73446.1| Tyrosyl-tRNA synthetase [Desulfurobacterium thermolithotrophum DSM
           11699]
          Length = 408

 Score =  116 bits (291), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 102/367 (27%), Positives = 161/367 (43%), Gaps = 30/367 (8%)

Query: 35  VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMM 94
           V+    G+D TA  LH GH   L  L   Q+ GHK   L+G  T++IGDP+ + E+R  +
Sbjct: 32  VLYVKAGFDPTAPDLHLGHTVLLWKLRDFQELGHKVYFLIGDFTAMIGDPTGKSETRPPL 91

Query: 95  RSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRML 154
             +E+ +N E          K    +   ++ N+E WL  +   DL++ + S ++V RML
Sbjct: 92  TKEEVLKNAETYA---QQVFKILDPEKTVVVFNSE-WLDKMTATDLIK-LSSKYTVARML 146

Query: 155 SFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
             +    R K  +S+   EF Y +LQ YD V L  +    +++GG+DQ  N++ G  L  
Sbjct: 147 ERDDFSKRFKEGRSIHIHEFIYPLLQGYDSVALKAD----VELGGTDQKFNLLIGRHLQR 202

Query: 215 RLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYN---------FWQYWRNI 264
                +   +  P+L    G  KM K+L   I + +     +           W+Y+R  
Sbjct: 203 EFGQEEQTCIMMPILEGLDGVQKMSKSLGNYIGILEPPEEQFGKVMRISDELMWRYYR-- 260

Query: 265 DDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAM 324
               +V+         M +  R  KL      EAKK +A  I    HG + A KA     
Sbjct: 261 ----LVTRVSEEEIEEMEKAVREGKLHP---MEAKKRLAETIVRTFHGEDAARKAREHFE 313

Query: 325 ECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSII 384
             F  S                   + L  L+ +AG   ST+E RR +K   ++I+   I
Sbjct: 314 RVF--SKRELPEEIPEPEISIPENPVWLPRLLKEAGLVKSTSEGRRQIKGGGVRIDGEKI 371

Query: 385 SNEKLQI 391
           ++E L+I
Sbjct: 372 TDENLKI 378


>gi|83815043|ref|YP_445743.1| tyrosyl-tRNA synthetase [Salinibacter ruber DSM 13855]
 gi|115305822|sp|Q2S238|SYY_SALRD RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|83756437|gb|ABC44550.1| tyrosyl-tRNA synthetase [Salinibacter ruber DSM 13855]
          Length = 412

 Score =  116 bits (291), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 95/385 (24%), Positives = 178/385 (46%), Gaps = 33/385 (8%)

Query: 10  SILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
            I+ E     ++   RE D       +T  +G D +   LH GH   L  L   Q  GH+
Sbjct: 19  EIVPEDELAEKLRTSRETDT-----PLTVKLGCDPSRPDLHLGHTVVLRKLRQFQDFGHR 73

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA---LML 126
            + ++G  T +IGDPS R ++R  +  +E +E+ +       S+ +  T   D     + 
Sbjct: 74  AVLIVGDFTGMIGDPSGRSKTRPQLTLEETREHGQ-------SYYEQATRVLDPNKTEIR 126

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
            N  WL  +++ D++ E+ +  +V +ML  +    R +  Q +S  EF Y + QA D V 
Sbjct: 127 YNSEWLDEMRFSDVI-ELAAQQTVAQMLKRDDFNERYEAGQPISLHEFLYPLAQARDSVH 185

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAI 245
           +  +    +++GG+DQ  N++    L E         +  PLL    G+ KM K+L  AI
Sbjct: 186 IEAD----VELGGTDQRFNLLLARRLQEANDQAAQVCMMLPLLEGTDGSDKMSKSLDNAI 241

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
            + +   +P + +    ++ D  +  + + +T +P  ++ ++ +        AK  +A  
Sbjct: 242 GIAE---APEDMYGKTMSVPDDLIYRYVELVTDIPTEQLPKVKQFAESNPRAAKAQLARR 298

Query: 306 ITTMVHGREEAEKAATAAMECFDMSI----HSQHMPTISISKDEVSRGMGLLTLIVKAGF 361
           I  M HG    E+AA  A E F+ ++        +P  + + ++ +  +GLL L+  A  
Sbjct: 299 IVEMYHG----EEAADRAEEHFEQTVVEGGVPDDLPEYTPTPEDGAE-VGLLNLMRHADL 353

Query: 362 ATSTNEARRHLKSNAIKINNSIISN 386
             S +E RR ++  A+ I+   +++
Sbjct: 354 TDSNSEGRRMIEQGAVTIDEEKVTD 378


>gi|330891258|gb|EGH23919.1| tyrosyl-tRNA synthetase [Pseudomonas syringae pv. mori str. 301020]
          Length = 398

 Score =  116 bits (290), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 97/347 (27%), Positives = 158/347 (45%), Gaps = 18/347 (5%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   +  L   Q  GH+ I L+G  T +IGDPS +  +R  +  +++ 
Sbjct: 39  GFDPTAPDLHLGHTVLINKLRQFQDLGHQVIFLIGDFTGMIGDPSGKSATRPPLTREQVL 98

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           +  E  K     F      KT+     N TW+  +   D +R + S ++V RML  +   
Sbjct: 99  DYAETYKS--QVFKILDPAKTEVAF--NSTWMDKLSPADFIR-LSSQYTVARMLERDDFD 153

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R K  QS++  EF Y ++Q YD V L  +    +++GG+DQ  N++ G +L        
Sbjct: 154 KRYKSNQSIAIHEFLYPLVQGYDSVALKAD----VELGGTDQKFNLLMGRELQRAYGQEP 209

Query: 221 LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTL 279
              LT PLL    G  KM K+L   + + +   +P   +    +I D+ +  + + L+  
Sbjct: 210 QCILTMPLLEGLDGVKKMSKSLGNYVGIQE---APGIMYSKLVSIPDSLMWRYFELLSFR 266

Query: 280 PMSEID--RMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMP 337
            M EI+  R     G    + K  +A E+    HG E A  A  +A            +P
Sbjct: 267 SMEEINGLRADCEAGANPRDIKIKLAEELVARFHGEEAAANAHRSAGNRMKEGELPDDLP 326

Query: 338 TISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSII 384
            IS++  E    M +  ++ KAG   +   AR  L S  ++I+  ++
Sbjct: 327 EISVAATE---DMPISAVLNKAGLVKNAAVARDLLASGGVRIDGEVV 370


>gi|33603324|ref|NP_890884.1| tyrosyl-tRNA synthetase [Bordetella bronchiseptica RB50]
 gi|81430199|sp|Q7WFD0|SYY_BORBR RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|33577448|emb|CAE34713.1| tyrosyl-tRNA synthetase [Bordetella bronchiseptica RB50]
          Length = 409

 Score =  116 bits (290), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 102/382 (26%), Positives = 179/382 (46%), Gaps = 25/382 (6%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  +  LQ  GH  I L+G  TS IGDPS R+ +R  +  ++I
Sbjct: 50  LGLDPTAPDIHLGHTVVLNKMRQLQDLGHNVIFLIGDFTSTIGDPSGRNSTRPPLTREQI 109

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           + N +      S  +     +T+  +  N  W C       + ++ S ++V RM+  E  
Sbjct: 110 ETNAKTYYAQASLVLD--PARTE--IRYNSEW-CDPLGARGMIQLASRYTVARMMEREDF 164

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R K    ++  EF Y +LQ YD V L  +    L++GG+DQ  N++ G +L +     
Sbjct: 165 TRRFKGGVPIAVHEFLYPLLQGYDSVALKAD----LELGGTDQKFNLLVGRELQKEYGQE 220

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
           +   LT PLL    G  KM K+    I +++   +P + +    +I D  +  + + L+ 
Sbjct: 221 QQCILTMPLLVGTDGVEKMSKSKGNYIGISE---APESMFGKLMSISDTLMWRYYELLSF 277

Query: 279 LPMSEIDRM-AKLQ-GKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM 336
             +++I  + A++  G+   +AK  +A EI    H  + AE A  A    F      + M
Sbjct: 278 RSLADIAALKAEIDGGRNPRDAKVALAQEIVARFHSPQAAEAALAAFEARFRDGAIPEDM 337

Query: 337 PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
           P +++         G+L ++ +AG   S +EA+R+++   +++N   + ++ LQ+     
Sbjct: 338 PEVTVG----GAPQGILRILREAGLVASGSEAQRNVEQGGVRVNGDRVEDKSLQL----- 388

Query: 397 DSTGNIKLSFGKKNHIICHLCG 418
            S G   +  GK+      L G
Sbjct: 389 -SAGTYVVQVGKRKFARVKLVG 409


>gi|33593889|ref|NP_881533.1| tyrosyl-tRNA synthetase [Bordetella pertussis Tohama I]
 gi|81424580|sp|Q7VUW5|SYY_BORPE RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|33563963|emb|CAE43226.1| tyrosyl-tRNA synthetase [Bordetella pertussis Tohama I]
 gi|332383308|gb|AEE68155.1| tyrosyl-tRNA synthetase [Bordetella pertussis CS]
          Length = 409

 Score =  116 bits (290), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 102/382 (26%), Positives = 179/382 (46%), Gaps = 25/382 (6%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  +  LQ  GH  I L+G  TS IGDPS R+ +R  +  ++I
Sbjct: 50  LGLDPTAPDIHLGHTVVLNKMRQLQDLGHNVIFLIGDFTSTIGDPSGRNSTRPPLTREQI 109

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           + N +      S  +     +T+  +  N  W C       + ++ S ++V RM+  E  
Sbjct: 110 ETNAKTYYAQASLVLD--PARTE--IRYNSEW-CDPLGARGMIQLASRYTVARMMEREDF 164

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R K    ++  EF Y +LQ YD V L  +    L++GG+DQ  N++ G +L +     
Sbjct: 165 TRRFKGGVPIAVHEFLYPLLQGYDSVALKAD----LELGGTDQKFNLLVGRELQKEYGQE 220

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
           +   LT PLL    G  KM K+    I +++   +P + +    +I D  +  + + L+ 
Sbjct: 221 QQCILTMPLLVGTDGVEKMSKSKGNYIGISE---APESMFGKLMSISDTLMWRYYELLSF 277

Query: 279 LPMSEIDRM-AKLQ-GKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM 336
             +++I  + A++  G+   +AK  +A EI    H  + AE A  A    F      + M
Sbjct: 278 RSLADIAALKAEIDGGRNPRDAKVALAQEIVARFHSPQAAEAALAAFEARFRDGAIPEDM 337

Query: 337 PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
           P +++         G+L ++ +AG   S +EA+R+++   +++N   + ++ LQ+     
Sbjct: 338 PEVTVG----GAPQGILRILREAGLVASGSEAQRNVEQGGVRVNGDRVEDKSLQL----- 388

Query: 397 DSTGNIKLSFGKKNHIICHLCG 418
            S G   +  GK+      L G
Sbjct: 389 -SAGTYVVQVGKRKFARVKLVG 409


>gi|66047792|ref|YP_237633.1| tyrosyl-tRNA synthetase [Pseudomonas syringae pv. syringae B728a]
 gi|75500401|sp|Q4ZMM7|SYY_PSEU2 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|63258499|gb|AAY39595.1| Tyrosyl-tRNA synthetase, class Ib [Pseudomonas syringae pv.
           syringae B728a]
          Length = 403

 Score =  116 bits (290), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 96/347 (27%), Positives = 158/347 (45%), Gaps = 18/347 (5%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   +  L   Q  GH+ I L+G  T +IGDPS +  +R  +  +++ 
Sbjct: 39  GFDPTAPDLHLGHTVLINKLRQFQDLGHQIIFLIGDFTGMIGDPSGKSATRPPLTREQVL 98

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           +  E  K     F      KT+     N TW+  +   D +R + S ++V RML  +   
Sbjct: 99  DYAETYKS--QVFKILDPAKTEVAF--NSTWMDQLSPADFIR-LSSQYTVARMLERDDFD 153

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R K  QS++  EF Y ++Q YD V L  +    +++GG+DQ  N++ G +L        
Sbjct: 154 KRYKSNQSIAIHEFLYPLVQGYDSVALKAD----VELGGTDQKFNLLMGRELQRAYGQEP 209

Query: 221 LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTL 279
              LT PLL    G  KM K+L   + + +   +P   +    +I D+ +  + + L+  
Sbjct: 210 QCILTMPLLEGLDGVKKMSKSLGNYVGIQE---APGIMYSKLVSIPDSLMWRYFELLSFR 266

Query: 280 PMSEIDRMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMP 337
            M EID +      G    + K  +A E+    HG E A  A  +A            +P
Sbjct: 267 SMEEIDGLKADCEAGANPRDIKIKLAEELVARFHGEEAAANAHRSAGNRMKEGELPDDLP 326

Query: 338 TISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSII 384
            +S++  E    M +  ++ KAG   +   AR  L S  ++I+  ++
Sbjct: 327 ELSVAAAE---DMPISAVLNKAGLVKNAAVARDLLASGGVRIDGEVV 370


>gi|323527315|ref|YP_004229468.1| tyrosyl-tRNA synthetase [Burkholderia sp. CCGE1001]
 gi|323384317|gb|ADX56408.1| tyrosyl-tRNA synthetase [Burkholderia sp. CCGE1001]
          Length = 416

 Score =  116 bits (290), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 100/372 (26%), Positives = 180/372 (48%), Gaps = 44/372 (11%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  +  LQ  GH  I L+G  TS+IGDPS R+ +R  +  ++I
Sbjct: 58  LGLDPTAPDIHIGHTVVLNKMRQLQDLGHTVIFLIGDFTSLIGDPSGRNATRPPLTREQI 117

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKY---------IDLLREIGSFFSV 150
           + N    K  F         +  AL+L+ E     I+Y          D + ++ S ++V
Sbjct: 118 ESN---AKTYF---------EQAALVLDREK--TEIRYNSEWSMPLGADGMIKLASRYTV 163

Query: 151 NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGI 210
            R+L  E    R +    +S  EF Y ++Q YD V L    +  L++GG+DQ  N++ G 
Sbjct: 164 ARILEREDFTKRFQSGVPISIHEFLYPLMQGYDSVAL----NADLELGGTDQKFNLLVGR 219

Query: 211 DLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADV 269
           +L ++    +   LT PLL    G  KM K+ +  I +++    P + +    +I D  +
Sbjct: 220 ELQKQYGQEQQCILTMPLLEGLDGVEKMSKSKNNYIGISER---PTDMFGKLMSISDTLM 276

Query: 270 VSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECF 327
             + + L+  PM EI   R     G+   + K ++  EI    H + +AE+    A+E F
Sbjct: 277 WRYFELLSFRPMDEIAAFRKEAEAGRNPRDFKVMLGQEIVARFHSQADAER----ALEDF 332

Query: 328 DMSIH---SQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSII 384
           +          +P ++++   ++ G     L+ +A    ST+EA R+++   +KI+ + +
Sbjct: 333 NHRAKGGVPDDIPAVALAGAPLAIGQ----LLKQANLVPSTSEALRNIEQGGVKIDGATV 388

Query: 385 SNEKLQIKLQDF 396
           S++ L+++  ++
Sbjct: 389 SDKGLKVEAGEY 400


>gi|311693249|gb|ADP96122.1| LOW QUALITY PROTEIN: tyrosyl-tRNA synthetase [marine bacterium
           HP15]
          Length = 403

 Score =  116 bits (290), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 93/358 (25%), Positives = 165/358 (46%), Gaps = 16/358 (4%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   +  L   Q  GH+ + L+G  T +IGDP+ +  +R  +  Q++ 
Sbjct: 42  GFDPTAPDLHLGHTVLINKLRQFQDLGHEVMFLIGDFTGMIGDPTGKSATRPPLTEQQVA 101

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           EN    K     F      KT  +   N  W+  +   D+++  G  ++V RML  +   
Sbjct: 102 ENAVSYKE--QVFKILDPAKTRVMF--NSDWMGKMSAADMIKLAGQ-YTVARMLERDDFT 156

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R + EQ+++  EF Y ++Q YD V +    +  +++GG+DQ  N++ G  L +      
Sbjct: 157 KRYRAEQAIAIHEFLYPLVQGYDSVAM----EADVELGGTDQKFNLLMGRILQKHYGQSP 212

Query: 221 LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTL 279
              LT P+L    G  KM K+L   + +N    SP   +    ++ D  +  + + L+  
Sbjct: 213 QVILTMPILEGLDGVQKMSKSLGNYVGVND---SPGEMYTKLLSMPDDLLWRYFELLSFR 269

Query: 280 PMSEID--RMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMP 337
           P++E+D  R A   G      KK++A EI T  H  E A  A  +A     +     ++P
Sbjct: 270 PLAEVDEFRKAVAGGANPPGLKKLLAEEIITRFHDEEAARTAHKSAGNRVALGEIPDNVP 329

Query: 338 TISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           T+ +  +  S  + +  ++  AG   +   AR  L   A+ ++      +++ ++  D
Sbjct: 330 TVEVPLEGQSE-IPMAAVLRLAGLVKNGAAARDVLGRGAVFVDGQKFEGDRMFVEGDD 386


>gi|33598386|ref|NP_886029.1| tyrosyl-tRNA synthetase [Bordetella parapertussis 12822]
 gi|81426168|sp|Q7W3Z8|SYY_BORPA RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|33574515|emb|CAE39160.1| tyrosyl-tRNA synthetase [Bordetella parapertussis]
          Length = 409

 Score =  116 bits (290), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 104/390 (26%), Positives = 175/390 (44%), Gaps = 41/390 (10%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  +  LQ  GH  I L+G  TS IGDPS R+ +R  +  ++I
Sbjct: 50  LGLDPTAPDIHLGHTVVLNKMRQLQDLGHNVIFLIGDFTSTIGDPSGRNSTRPPLTREQI 109

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           + N +      S  +     +T+  +  N  W C       + ++ S ++V RM+  E  
Sbjct: 110 ETNAKTYYAQASLVLD--PARTE--IRYNSEW-CDPLGARGMIQLASRYTVARMMEREDF 164

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R K    ++  EF Y +LQ YD V L  +    L++GG+DQ  N++ G +L +     
Sbjct: 165 TRRFKGGVPIAVHEFLYPLLQGYDSVALKAD----LELGGTDQKFNLLVGRELQKEYGQE 220

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYN---------FWQYWRNIDDADV 269
           +   LT PLL    G  KM K+    I +++   S +           W+Y+      ++
Sbjct: 221 QQCILTMPLLVGTDGVEKMSKSKGNYIGISEAPESMFGKLMSISDMLMWRYY------EL 274

Query: 270 VSFAKRLTTLPM-SEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFD 328
           +SF        + +EID      G+   +AK  +A EI    H  + AE A  A    F 
Sbjct: 275 LSFRSLADIAALKAEID-----GGRNPRDAKVALAQEIVARFHSPQAAEAALAAFEARFR 329

Query: 329 MSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEK 388
                + MP +++         G+L ++ +AG   S +EA+R+++   +++N   + ++ 
Sbjct: 330 DGAIPEDMPEVTVG----GAPQGILRILREAGLVASGSEAQRNVEQGGVRVNGDRVEDKS 385

Query: 389 LQIKLQDFDSTGNIKLSFGKKNHIICHLCG 418
           LQ+      S G   +  GK+      L G
Sbjct: 386 LQL------SAGTYVVQVGKRKFARVKLVG 409


>gi|302189577|ref|ZP_07266250.1| tyrosyl-tRNA synthetase [Pseudomonas syringae pv. syringae 642]
          Length = 403

 Score =  116 bits (290), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 96/347 (27%), Positives = 158/347 (45%), Gaps = 18/347 (5%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   +  L   Q  GH+ I L+G  T +IGDPS +  +R  +  +++ 
Sbjct: 39  GFDPTAPDLHLGHTVLINKLRQFQDLGHQIIFLIGDFTGMIGDPSGKSATRPPLTREQVL 98

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           +  E  K     F      KT+     N TW+  +   D +R + S ++V RML  +   
Sbjct: 99  DYAETYKS--QVFKILDPAKTEVAF--NSTWMDQLSPADFIR-LSSQYTVARMLERDDFD 153

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R K  QS++  EF Y ++Q YD V L  +    +++GG+DQ  N++ G +L        
Sbjct: 154 KRYKSNQSIAIHEFLYPLVQGYDSVALKAD----VELGGTDQKFNLLMGRELQRAYGQEP 209

Query: 221 LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTL 279
              LT PLL    G  KM K+L   + + +   +P   +    +I D+ +  + + L+  
Sbjct: 210 QCILTMPLLEGLDGVKKMSKSLGNYVGIQE---APGIMYSKLVSIPDSLMWRYFELLSFR 266

Query: 280 PMSEIDRMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMP 337
            M EI+ +      G    + K  +A E+    HG E A  A  +A            +P
Sbjct: 267 SMEEINSLKSDCEAGANPRDIKIKLAEELVARFHGEEAAANAHRSAGNRMKEGELPDDLP 326

Query: 338 TISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSII 384
            IS++  E    M +  ++ KAG   +   AR  L S  ++I+  ++
Sbjct: 327 EISVAAAE---DMPISAVLNKAGLVKNAAVARDLLASGGVRIDGEVV 370


>gi|257455122|ref|ZP_05620360.1| tyrosyl-tRNA synthetase [Enhydrobacter aerosaccus SK60]
 gi|257447455|gb|EEV22460.1| tyrosyl-tRNA synthetase [Enhydrobacter aerosaccus SK60]
          Length = 406

 Score =  116 bits (290), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 95/377 (25%), Positives = 176/377 (46%), Gaps = 25/377 (6%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           I+S+   I ++   R L +           G+D TA  LH GH   +  L   Q  GH+ 
Sbjct: 25  IISQDDLIKKLKENRPLRVKA---------GFDPTAPDLHLGHTVLINKLKHFQDLGHQV 75

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           + L+G  T+ IGDP+ ++ +R  +  ++I EN +  K     F      KT  +   N  
Sbjct: 76  LFLIGDYTARIGDPTGKNTTRPPLSEEKILENAQTYKE--QVFKILDPAKTQVMF--NSD 131

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           W   +   D++  + S  +V+RML  +    R   +  +S  EF Y ++Q YD V +  +
Sbjct: 132 WFSKMSAGDMIG-LASQQTVSRMLERDDFSKRYHSQTPISIHEFLYPLVQGYDSVAMQAD 190

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNK 249
               +++GG+DQ  N++ G  L  R        +T P+L    G  KM K+L   I +  
Sbjct: 191 ----VELGGTDQTFNLLMGRTLQSRYGQVPQVCITVPILEGLDGVQKMSKSLGNYIGI-- 244

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATEIT 307
              S  + +Q   ++ D  +  + + L+  PM E++ + K    G+   E K+I+A E+ 
Sbjct: 245 -YDSAGSMYQKILSMPDTLIARYFELLSFKPMDEVEALLKDIENGRNPQEVKRILALELI 303

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
              H +E AE A  +A            +P ++IS D  ++ + +  ++ +A    ++ +
Sbjct: 304 ERFHDKEAAENAHKSAGNRLVEGELPVDLPEVTISLDGQAQ-LFITQVLNQANLVKNSAQ 362

Query: 368 ARRHLKSNAIKINNSII 384
           A+  LK+ ++K++  ++
Sbjct: 363 AKDFLKNQSVKVDGQVV 379


>gi|330970780|gb|EGH70846.1| tyrosyl-tRNA synthetase [Pseudomonas syringae pv. aceris str.
           M302273PT]
          Length = 399

 Score =  115 bits (289), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 96/347 (27%), Positives = 158/347 (45%), Gaps = 18/347 (5%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   +  L   Q  GH+ I L+G  T +IGDPS +  +R  +  +++ 
Sbjct: 39  GFDPTAPDLHLGHTVLINKLRQFQDLGHQIIFLIGDFTGMIGDPSGKSATRPPLTREQVL 98

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           +  E  K     F      KT+     N TW+  +   D +R + S ++V RML  +   
Sbjct: 99  DYAETYKS--QVFKILDPAKTEVAF--NSTWMDQLSPADFIR-LSSQYTVARMLERDDFD 153

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R K  QS++  EF Y ++Q YD V L  +    +++GG+DQ  N++ G +L        
Sbjct: 154 KRYKSNQSIAIHEFLYPLVQGYDSVALKAD----VELGGTDQKFNLLMGRELQRAYGQEP 209

Query: 221 LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTL 279
              LT PLL    G  KM K+L   + + +   +P   +    +I D+ +  + + L+  
Sbjct: 210 QCILTMPLLEGLDGVKKMSKSLGNYVGIQE---APGIMYSKLVSIPDSLMWRYFELLSFR 266

Query: 280 PMSEIDRMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMP 337
            M EID +      G    + K  +A E+    HG E A  A  +A            +P
Sbjct: 267 SMEEIDGLKADCEAGANPRDIKIKLAEELVARFHGEEAAANAHRSAGNRMKEGELPDDLP 326

Query: 338 TISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSII 384
            +S++  E    M +  ++ KAG   +   AR  L S  ++I+  ++
Sbjct: 327 ELSVAAAE---DMPISAVLNKAGLVKNAAVARDLLASGGVRIDGEVV 370


>gi|82701636|ref|YP_411202.1| tyrosyl-tRNA synthetase [Nitrosospira multiformis ATCC 25196]
 gi|115305810|sp|Q2YBR1|SYY_NITMU RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|82409701|gb|ABB73810.1| tyrosyl-tRNA synthetase [Nitrosospira multiformis ATCC 25196]
          Length = 403

 Score =  115 bits (289), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 90/354 (25%), Positives = 166/354 (46%), Gaps = 17/354 (4%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   L  +  LQ  GH  + L+G  T +IGDPS ++ +R  +  +++ 
Sbjct: 40  GFDPTAPDLHLGHTVLLNKMRHLQDLGHHALFLIGDFTGMIGDPSGKNTTRPPLSREQVA 99

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           EN +  +      +K    +T+ +   N  W+  +   DL++ + +  +V RML  +   
Sbjct: 100 ENAKSYQDQVFRILK--PEQTEVVF--NSAWMDRLNAADLIK-LAATHTVARMLERDDFG 154

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R +  + ++  EF Y ++Q YD V L  +    +++GG+DQ  N++ G +L +      
Sbjct: 155 KRYQSNKPIAIHEFLYPLIQGYDSVALRAD----IELGGTDQKFNLLMGRELQKHFGQAS 210

Query: 221 LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTL 279
              +T PLL    G  KM K+    I + +   SP N +    +I D  +  + + L+  
Sbjct: 211 QCVITMPLLEGLDGVNKMSKSAGNYIGITE---SPGNMFGKLMSISDELMWRYIELLSFE 267

Query: 280 PMSEIDRMAKL--QGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMP 337
           P+  + +  +    G+   + K + A EI T  H R++AE A       F        +P
Sbjct: 268 PLRVVRQWQQDVGNGRNPRDIKVLFAQEIVTRFHSRQDAEAALADFESRFRRGGIPDDLP 327

Query: 338 TISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
              +   +   G+ +  L+ + G   ST EA R ++   +K+N   +S++  ++
Sbjct: 328 ENILQAGK--EGLPIAQLLKQTGLTASTTEALRMIEQGGVKLNGEKVSDKTFRL 379


>gi|323143032|ref|ZP_08077738.1| tyrosine--tRNA ligase [Succinatimonas hippei YIT 12066]
 gi|322417226|gb|EFY07854.1| tyrosine--tRNA ligase [Succinatimonas hippei YIT 12066]
          Length = 395

 Score =  115 bits (289), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 96/359 (26%), Positives = 167/359 (46%), Gaps = 36/359 (10%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  L   Q+ GH+ + ++G  T+ +GDPS ++ +R  +  ++I
Sbjct: 38  LGMDPTAPDIHLGHTVILNKLRTFQELGHQVVLIIGDFTASVGDPSGKNTTRPQLSREKI 97

Query: 100 QENIE-------KIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNR 152
            EN +       KI     + I+Y           N  WL  +     +R + S  +V R
Sbjct: 98  LENAKTYAEQAFKILDKDKTIIRY-----------NSEWLGKLGAEGTIR-LASKLTVAR 145

Query: 153 MLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL 212
           ML  +    R +  Q ++  EF Y + Q YD V L  +    +++GG+DQ  N++ G +L
Sbjct: 146 MLERDDFTKRYQSGQPIAIHEFLYPLFQGYDSVCLKAD----IELGGTDQKFNLLMGREL 201

Query: 213 GERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVS 271
            +         L  PLL    G  KM K+    I ++    +P + +    ++ D  + +
Sbjct: 202 QKDAGQEPQCVLMMPLLVGLDGVKKMSKSAGNYIGVH---DAPNDMFGKIMSLSDDLMWT 258

Query: 272 FAKRLTTLPMSEIDRM-AKLQGKEIN--EAKKIIATEITTMVHGREEAEKAATAAMECFD 328
           +   L+  P+ EI  + A     ++N  +AK  +  EI    HG+EE +KA  + +  F 
Sbjct: 259 YFDLLSFRPLKEIAELKANCASGQMNPRDAKMELGREIVARYHGKEEGDKAVESFINQFA 318

Query: 329 MSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNE 387
                  MP +++          L TL+  +    ST+EA R +K NA+KI+  +I+++
Sbjct: 319 KGAVPDEMPELTLD------NAPLPTLLKNSQLCASTSEAMRMIKQNAVKIDGKVIADK 371


>gi|158336483|ref|YP_001517657.1| tyrosyl-tRNA synthetase [Acaryochloris marina MBIC11017]
 gi|158306724|gb|ABW28341.1| tyrosyl-tRNA synthetase [Acaryochloris marina MBIC11017]
          Length = 404

 Score =  115 bits (289), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 102/380 (26%), Positives = 180/380 (47%), Gaps = 31/380 (8%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D T + LH GH   +  L   Q  GHK + ++G  T+ +GDP+ + E RR +   E+
Sbjct: 45  LGIDPTGTDLHLGHSLPIRKLRAFQDLGHKAVLIIGDFTARVGDPTGKSEVRRQLTEAEV 104

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           Q NI+         + + T     +  N+E WL  I     L E+ +  +V +ML+ E  
Sbjct: 105 QHNIQTYLDQIKPILDFETPDRLEVRYNSE-WLSKIDLAKTL-ELLTTMTVGQMLAKEGF 162

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R ++   +   EF Y +LQ YD V +    +  +++GG+DQ  NI  G DL       
Sbjct: 163 AERYQQGTPVYLHEFLYPLLQGYDSVAV----EADVELGGTDQKFNIAIGRDLQRHFGLR 218

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
             F L +P+L    G  KM K+L+  + L ++  S Y+  +      DA +  + + LT 
Sbjct: 219 PQFGLLTPILLGTDGVQKMSKSLNNYVGLAEDAVSMYSKLE---KTPDALLPEYFEHLTN 275

Query: 279 LPMSEIDRMAKLQGKEINEAKKIIATEITTMVHG---REEAEKAATAAMECFDMSIHSQH 335
           L + ++    +       E +K++A  + +  H      E +++  A +   DMS  +  
Sbjct: 276 LSLKDLPENPR-------EQQKLLAHTVVSQYHSVAIANETQQSLAAMVTQGDMS-QTDV 327

Query: 336 MPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           +P  S++  EV+    L  L+  +G  +S+++ARR +K  A+K++ +     K+ +  Q 
Sbjct: 328 IPEYSLA--EVTFPAKLFYLLSASGLCSSSSDARRQIKGGAVKLDGT-----KITVVDQT 380

Query: 396 FDSTGNI---KLSFGKKNHI 412
           +D   ++    L  GKK  I
Sbjct: 381 YDQPDDLIGAVLQVGKKKFI 400


>gi|310642771|ref|YP_003947529.1| tyrosyl-tRNA synthetase [Paenibacillus polymyxa SC2]
 gi|309247721|gb|ADO57288.1| Tyrosyl-tRNA synthetase [Paenibacillus polymyxa SC2]
          Length = 417

 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 94/374 (25%), Positives = 172/374 (45%), Gaps = 17/374 (4%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D +A  +H GH   +  L   Q+ GH+   ++G  T  IGDP+ + E+R+ +  +++
Sbjct: 52  LGLDPSAPDIHIGHTVVMHKLRQFQELGHQVQLIIGDFTGRIGDPTGKSETRKQLTEEDV 111

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           Q N +  K       K    +   +  N+E WL  + + D++  + +  +V RML  +  
Sbjct: 112 QRNAQTYK---EQIFKILDPEKTKVYYNSE-WLGPMSFADVVT-LSAKVTVARMLERDDF 166

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R +    +S  EF Y ++Q  D V L  +    +++GG+DQ  N++ G  L +     
Sbjct: 167 TKRYQNGLPISIHEFFYPLMQGMDSVALQSD----IELGGTDQKFNLLMGRTLQKEYGVE 222

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSF---AKR 275
               +T PLL    G  KM K+L   I +++E   P   +    ++ D  ++ +   A  
Sbjct: 223 PQATITLPLLEGLDGVQKMSKSLGNYIGVDEE---PNEIYGKSMSVPDELMLKYFELATD 279

Query: 276 LTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQH 335
           +T   ++E+ +  K       +AK  +A  +  M HG E AE A    +  F        
Sbjct: 280 ITNEELAELAKGVKEGSVHPRDAKMKLAGTLVRMYHGEEAAEAAKQHFVTVFQQRALPDD 339

Query: 336 MPTISISKDEVSR-GMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
           +   +++ D++   G+ ++ L+   GFA S  EA+R ++  ++KIN    ++     K Q
Sbjct: 340 IEEFTLTADQLEEGGIRVIQLLTHLGFAASNGEAKRSIQQGSVKINEEKWTDVNEAYKPQ 399

Query: 395 DFDSTGNIKLSFGK 408
           + D     K  F K
Sbjct: 400 EGDIVQVGKRKFAK 413


>gi|255292552|dbj|BAH89665.1| tyrosyl-tRNA synthetase [uncultured bacterium]
          Length = 413

 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 103/369 (27%), Positives = 178/369 (48%), Gaps = 43/369 (11%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  L  LQ  GH+ I L+G  TS+IGDPS R+ +R  + +++I
Sbjct: 53  LGLDPTAPDIHIGHTVVLNKLRQLQDLGHQVIFLIGDFTSLIGDPSGRNSTRPPLSAEQI 112

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           + N E  K    +F      +T+ L  N+E W  ++    ++ ++ + ++V RM+     
Sbjct: 113 RANAETYKA--QAFKVLDPARTE-LRYNSE-WSDALGARGMI-QLAARYTVARMMERNDF 167

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R K    +S  EF Y ++Q YD V L  +    +++GG+DQ  N++ G  L +     
Sbjct: 168 AERFKAGTPISVHEFLYPLMQGYDSVALKSD----IELGGTDQKFNLLVGRHLQQEYGQE 223

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRL-- 276
               LT PLL    G  KM K+    + + ++  + +           A V+S +  L  
Sbjct: 224 PQCILTMPLLEGLDGVEKMSKSKGNYVGITEDANTMF-----------AKVLSISDELMW 272

Query: 277 ---TTLPMSEIDRMAKLQ-----GKEINEAKKIIATEITTMVHGREEAEKAATAAMECFD 328
              T L    I  +  L+     G+   +AK ++A EIT   H       AA A     D
Sbjct: 273 RWYTLLSFRSIAEIEALKAEVAGGRNPKDAKVMLAKEITARFH------SAAAAEAAEAD 326

Query: 329 MSIHSQ-----HMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSI 383
            +  S+     H+P IS+   E    +G+  ++ ++G A ST+EA R +    +++++S+
Sbjct: 327 FAHRSRGGVPDHIPEISLPTGE-GGALGIGLVLKQSGLAPSTSEANRLIDGGGVRVDSSV 385

Query: 384 ISNEKLQIK 392
           +S++ L++K
Sbjct: 386 VSDKGLKLK 394


>gi|149178799|ref|ZP_01857380.1| tyrosyl-tRNA synthetase [Planctomyces maris DSM 8797]
 gi|148842340|gb|EDL56722.1| tyrosyl-tRNA synthetase [Planctomyces maris DSM 8797]
          Length = 407

 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 90/358 (25%), Positives = 169/358 (47%), Gaps = 23/358 (6%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G D T   LH GH   +  +   Q+ GH+ + ++G  T+++GDPS RDE+R  + +++++
Sbjct: 45  GIDPTGIDLHLGHTVPMRKMRQFQELGHQAVIIIGNYTALVGDPSGRDETRARLTAEQVE 104

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
            N           I       +A ++ N  W   + +  +L E+ S  +V ++L+ +   
Sbjct: 105 ANAVDYLNQVGKVIDL----ENAEVVRNGDWFSKMNFAAIL-ELCSKVTVAQLLTRDDFS 159

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R + E ++   E  Y I+QA+D VE+  +    +++GG++Q  + +   DL +     +
Sbjct: 160 KRYREEAAIYLHECLYPIMQAWDSVEIKAD----IELGGTEQLYSFMLARDLQKDQGLRQ 215

Query: 221 LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTL 279
             ++ SP+L    G  +MGK+L   I +++   SPY   + +  + D  +  F + LT  
Sbjct: 216 QVSVMSPILVGTDGVRRMGKSLGNYIGISE---SPYEMMKKFMQLSDDSMQMFYELLTDF 272

Query: 280 PMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI 339
           P+ E+  +     K   EAK  +A  I    H    AE++A             + +P  
Sbjct: 273 PLDEVQTILAGHPK---EAKVKLAKTIIAEYHDTAAAEESADRWQREIGSGGLPEDIPVA 329

Query: 340 SISKDEVSRGMGL--LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
            IS+ E++    L    L+ + G   ST++ARR ++    K+       EK++I+  D
Sbjct: 330 KISRSELNEDGTLPAANLLKQLGLCASTSDARRSIQQGGAKMG-----EEKVKIETHD 382


>gi|317402596|gb|EFV83158.1| tyrosyl-tRNA synthetase [Achromobacter xylosoxidans C54]
          Length = 409

 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 100/355 (28%), Positives = 171/355 (48%), Gaps = 19/355 (5%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  +  LQ  GH+ I L+G  TS IGDPS R+ +R  +  ++I
Sbjct: 50  LGLDPTAPDIHLGHTVVLNKMRQLQDLGHEVIFLIGDFTSTIGDPSGRNSTRPPLTREQI 109

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           + N +      S  +     +T+  +  N  W   +    ++ ++ S ++V RM+  E  
Sbjct: 110 EANAKTYYAQASLVLD--PARTE--IRYNSEWCDPLGARGMI-QLASRYTVARMMEREDF 164

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R K    +S  EF Y ++Q YD V L  +    L++GG+DQ  N++ G +L +     
Sbjct: 165 TKRFKGGIPISVHEFLYPLMQGYDSVALKSD----LELGGTDQKFNLLVGRELQKEYGQE 220

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               LT PLL    G  KM K+    I +++   SP + +    +I D  +  + + L+ 
Sbjct: 221 PQCILTMPLLVGTDGVEKMSKSKGNYIGISE---SPDSMFGKLMSISDTLMWRYFELLSF 277

Query: 279 LPMSEID--RMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM 336
             + +I   R     G+   +AK ++A EI T  H  + AE A  A    F      + M
Sbjct: 278 RSLEDIAALRQEIDGGRNPRDAKVMLAQEIITRFHSAKAAEDALAAFEARFRDGAIPEDM 337

Query: 337 PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
           P +S+    V    G+L L+ +AG   S +EA+R+++   +++N   + ++ LQ+
Sbjct: 338 PEVSVGGAPV----GILKLLREAGLVASGSEAQRNVEQGGVRVNGDRVEDKSLQL 388


>gi|187251251|ref|YP_001875733.1| tyrosyl-tRNA synthetase [Elusimicrobium minutum Pei191]
 gi|186971411|gb|ACC98396.1| Tyrosyl-tRNA synthetase [Elusimicrobium minutum Pei191]
          Length = 387

 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 110/376 (29%), Positives = 178/376 (47%), Gaps = 27/376 (7%)

Query: 15  RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLM 74
           RG +  +S     + L S   +   +G D T+S LH GH   L  L   Q  GH  + ++
Sbjct: 13  RGCVDVVSKEELENKLKSGRTLKVKLGCDPTSSDLHLGHSVVLSKLRQFQDLGHTAVLVI 72

Query: 75  GGGTSIIGDPSFRDESRRMMRSQEIQENIEK-IKGIFSSFIKYGTGKTDALMLNNETWLC 133
           G  T+ IGDPS R+ +R  +  ++I +N +   + +F    K    KT+ +   N TWL 
Sbjct: 73  GDFTAGIGDPSGRNSTRPQLDREQILQNAKTYTEQVFKVLDKE---KTEVVF--NSTWLD 127

Query: 134 S-IKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYD 192
             +K  +LL  + S  +V + L  E  + R+     +S LE  Y + Q  D V L  +  
Sbjct: 128 PFVKTKELLLTL-SKITVRQGLEREDFKKRMAAGDPVSILEILYSVFQGQDSVALKAD-- 184

Query: 193 CRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEM 251
             +++GG+DQ  N++ G  L +         LT+PLL    G  KM K+ +  I LN   
Sbjct: 185 --VELGGTDQIFNLLVGRQLQKNAGQEAQVVLTTPLLVGTDGVKKMSKSYNNYIGLN--- 239

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVH 311
                 +    +I D  +  + + LT+  M ++  M  +      EAKK +A  + T  H
Sbjct: 240 DPAEEMFGKAMSISDEMMYMYYELLTSEDMDKVKAMHPM------EAKKSLAKILVTRFH 293

Query: 312 GREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRH 371
                 +AA AA+  F+     +  P   +SK  V+ G  + ++I+KAG A S NEARR 
Sbjct: 294 NA----EAAEAALNNFEKVFSKKEKPA-DMSKITVAEGESVSSVIIKAGAAKSKNEARRL 348

Query: 372 LKSNAIKINNSIISNE 387
           +   A+KIN+  + ++
Sbjct: 349 IDGGAVKINDVKVESD 364


>gi|187925323|ref|YP_001896965.1| tyrosyl-tRNA synthetase [Burkholderia phytofirmans PsJN]
 gi|187716517|gb|ACD17741.1| tyrosyl-tRNA synthetase [Burkholderia phytofirmans PsJN]
          Length = 416

 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 100/372 (26%), Positives = 180/372 (48%), Gaps = 44/372 (11%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  +  LQ  GH  I L+G  TS+IGDPS R+ +R  +  ++I
Sbjct: 58  LGLDPTAPDIHIGHTVVLNKMRQLQDLGHTVIFLIGDFTSLIGDPSGRNATRPPLTREQI 117

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKY---------IDLLREIGSFFSV 150
           + N    K  F            AL+L+ E     I+Y          D + ++ S ++V
Sbjct: 118 ESN---AKTYFDQA---------ALVLDREK--TEIRYNSEWSMPLGADGMIKLASRYTV 163

Query: 151 NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGI 210
            R+L  E    R +    +S  EF Y ++Q YD V L    +  L++GG+DQ  N++ G 
Sbjct: 164 ARILEREDFTKRFQGGVPISIHEFLYPLMQGYDSVAL----NADLELGGTDQKFNLLVGR 219

Query: 211 DLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADV 269
           +L ++    +   LT PLL    G  KM K+ +  I ++++   P + +    +I D  +
Sbjct: 220 ELQKQYGQEQQCILTMPLLEGLDGVEKMSKSKNNYIGISEK---PTDMFGKLMSISDVLM 276

Query: 270 VSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECF 327
             + + L+  PM EI    K    G+   + K ++  EI    H + +AE+    A+E F
Sbjct: 277 WRYFELLSFRPMDEIAGFRKEIEAGRNPRDFKVLLGQEIVARFHSQADAER----ALEDF 332

Query: 328 DMSIH---SQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSII 384
           +          +P ++++   ++ G     L+ +A    ST+EA R+++   +KI+ + +
Sbjct: 333 NHRAKGGVPDDIPAVTLAGAPLAIGQ----LLKQANLVPSTSEALRNIEQGGVKIDGATV 388

Query: 385 SNEKLQIKLQDF 396
           S++ L+++  ++
Sbjct: 389 SDKGLKVEAGEY 400


>gi|296162970|ref|ZP_06845747.1| tyrosyl-tRNA synthetase [Burkholderia sp. Ch1-1]
 gi|295886764|gb|EFG66605.1| tyrosyl-tRNA synthetase [Burkholderia sp. Ch1-1]
          Length = 416

 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 99/364 (27%), Positives = 180/364 (49%), Gaps = 28/364 (7%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  +  LQ  GH  I L+G  TS+IGDPS R+ +R  +  ++I
Sbjct: 58  LGLDPTAPDIHIGHTVVLNKMRQLQDLGHTVIFLIGDFTSLIGDPSGRNATRPPLTREQI 117

Query: 100 QENIEKIKGIF-SSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
           + N    K  F  + +     KT+  +  N  W   +   D + ++ S ++V R+L  E 
Sbjct: 118 ESN---AKTYFEQAALVLDRDKTE--IRYNSEWSMPLG-ADGMIKLASRYTVARILERED 171

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
              R +    +S  EF Y ++Q YD V L    +  L++GG+DQ  N++ G +L ++   
Sbjct: 172 FTKRFQSGVPISIHEFLYPLMQGYDSVAL----NADLELGGTDQKFNLLVGRELQKQYGQ 227

Query: 219 PKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT 277
            +   LT PLL    G  KM K+ +  I ++++   P + +    +I D  +  + + L+
Sbjct: 228 EQQCILTMPLLEGLDGVEKMSKSKNNYIGISEK---PTDMFGKLMSISDVLMWRYFELLS 284

Query: 278 TLPMSEIDRMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIH--- 332
             PM EI    K    G+   + K ++  EI    H + +AE+    A+E F+       
Sbjct: 285 FRPMEEIAGFKKETEAGRNPRDFKVMLGQEIVARFHSQADAER----ALEDFNHRAKGGV 340

Query: 333 SQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
              +P ++++   ++ G     L+ +A    ST+EA R+++   +KI+ + +S++ L+I+
Sbjct: 341 PDDIPAVTLAGAPLAIGQ----LLKQANLVPSTSEALRNIEQGGVKIDGATVSDKGLKIE 396

Query: 393 LQDF 396
             ++
Sbjct: 397 AGEY 400


>gi|77461319|ref|YP_350826.1| tyrosyl-tRNA synthetase [Pseudomonas fluorescens Pf0-1]
 gi|115305819|sp|Q3K5W9|SYY_PSEPF RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|77385322|gb|ABA76835.1| tyrosyl-tRNA synthetase [Pseudomonas fluorescens Pf0-1]
          Length = 399

 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 96/347 (27%), Positives = 157/347 (45%), Gaps = 18/347 (5%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   +  L   Q+ GH+ I L+G  T +IGDPS +  +R  +  +++ 
Sbjct: 39  GFDPTAPDLHLGHTVLINKLRQFQELGHQVIFLIGDFTGMIGDPSGKSATRPPLTREQVL 98

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           EN E  K     F      KT+     N TW+  +   D +R + S ++V RML  +   
Sbjct: 99  ENAETYK--TQVFKILDPAKTEVAF--NSTWMDQMGPADFIR-LTSQYTVARMLERDDFD 153

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R    Q ++  EF Y ++Q YD V L  +    +++GG+DQ  N++ G +L        
Sbjct: 154 KRYTTNQPIAIHEFLYPLVQGYDSVALRAD----VELGGTDQKFNLLMGRELQRGYGQEA 209

Query: 221 LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTL 279
              LT PLL    G  KM K+L   + + +   +P   +    +I DA +  + + L+  
Sbjct: 210 QCILTMPLLEGLDGVKKMSKSLGNYVGIQE---APGVMYSKLVSIPDALMWRYFELLSFR 266

Query: 280 PMSEID--RMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMP 337
            M EI+  R     G    + K  +A EI    HG E A  A   A            +P
Sbjct: 267 SMDEINAFRADVEAGANPRDIKIKLAEEIVARFHGEEAAANAHRGAGNRMKDGELPDDLP 326

Query: 338 TISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSII 384
            + ++  E    M +  ++ KAG   ++  AR  L S  ++++  ++
Sbjct: 327 EVELTAAE---DMPIAAVLNKAGLVKNSAAARDLLASGGVRVDGEVV 370


>gi|189346070|ref|YP_001942599.1| tyrosyl-tRNA synthetase [Chlorobium limicola DSM 245]
 gi|189340217|gb|ACD89620.1| tyrosyl-tRNA synthetase [Chlorobium limicola DSM 245]
          Length = 405

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 92/360 (25%), Positives = 162/360 (45%), Gaps = 23/360 (6%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D +   LH GH   L  L   Q  GH+ I ++G  T++IGDPS + ++R  + ++E 
Sbjct: 44  LGADPSRPDLHLGHSVVLKKLREFQDLGHEAILIIGDFTAMIGDPSGKSKTRPQLSAEEA 103

Query: 100 QENIEKIKGIFSSFIKYGTGKTDAL---MLNNETWLCSIKYIDLLREIGSFFSVNRMLSF 156
           +EN         S+ +  +   DA    +  N  WL  + + D++R + S ++V RML  
Sbjct: 104 REN-------GKSYFEQASKILDAAKTTICYNADWLGKMSFSDVIR-LSSHYTVARMLER 155

Query: 157 ESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL 216
           +    R +  + +S  EF Y + Q  D V L  +    +++GG+DQ  N++ G DL    
Sbjct: 156 DDFERRYRSREPISIHEFLYPLAQGMDSVHLKND----VELGGTDQKFNLLVGRDLQREY 211

Query: 217 KTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKR 275
                  +T  LL    G  KM K+L  AI  N     P + +    +I D  + ++ + 
Sbjct: 212 GIAPQVCITMELLVGTDGKEKMSKSLGNAICFN---DPPNDMYGKVLSIPDTLIETYHRL 268

Query: 276 LTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQH 335
           L T     +  +         EAK+ +A +I    +    A +A       F       +
Sbjct: 269 LVTGNKELLTTLRGHIADNPREAKRTLAKDIVAQYYSINAAREAEGHFDRIFVQKKAPDN 328

Query: 336 MPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           +  +   ++ ++    +  L+V  G A S +EARR ++ NA+ +N   I++    + L D
Sbjct: 329 IELVEFGQNSIA----VTDLLVSLGAAPSKSEARRMIQQNAVTVNEEKITDTNALVPLDD 384


>gi|17230474|ref|NP_487022.1| tyrosyl-tRNA synthetase [Nostoc sp. PCC 7120]
 gi|81771136|sp|Q8YSU9|SYY_ANASP RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|17132076|dbj|BAB74681.1| tyrosyl tRNA synthetase [Nostoc sp. PCC 7120]
          Length = 398

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 89/348 (25%), Positives = 160/348 (45%), Gaps = 24/348 (6%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G D T + +H GH   +  L   Q  GH  + ++G  T+ IGDP+ + E RR +  ++++
Sbjct: 45  GIDPTGADIHLGHSIPMRKLRGFQDAGHTAVLIIGDFTARIGDPTGKSEMRRQLTEEDVK 104

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           +N +         + + T     +  N+E WL  +  +  + E+ +  +V +ML+ E   
Sbjct: 105 QNAQTYLDQVRPILDFDTPGRLEVRYNSE-WLSRLD-LGKITELLATMTVGQMLAKEGFA 162

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R K+E  +   EF Y ++Q YD V +    +  +++GG+DQ  NI  G DL        
Sbjct: 163 DRYKKENPIFLHEFLYPLMQGYDSVAI----EADVELGGTDQKFNIAVGRDLQRHFGQKP 218

Query: 221 LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTL 279
            F +  P+L    G  KM K+L   + L++    P   +Q  + + D  +  + + LT L
Sbjct: 219 QFGVLLPILIGTDGVQKMSKSLGNYVSLSEH---PGQKYQKLQGVPDVLLKDYFELLTNL 275

Query: 280 PMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI 339
           P+  +    +       + + ++A EI    HG    E+AA  A E          +P  
Sbjct: 276 PIDALPENPR-------DRQMLLAWEIVKQYHG----EQAANEAKEAAQSGGKEGAVPEF 324

Query: 340 SISKDEVSR-GMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISN 386
           S+S   VS+  + L  L+   G   ST E +R ++   ++++   IS+
Sbjct: 325 SLSN--VSQFPVKLAYLLGATGLCKSTGEGKRKIQEGGVRLDGDRISD 370


>gi|328952109|ref|YP_004369443.1| Tyrosyl-tRNA synthetase [Desulfobacca acetoxidans DSM 11109]
 gi|328452433|gb|AEB08262.1| Tyrosyl-tRNA synthetase [Desulfobacca acetoxidans DSM 11109]
          Length = 406

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 95/364 (26%), Positives = 169/364 (46%), Gaps = 32/364 (8%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   +  L   Q+ GH+ I L+G  T +IGDPS + E+R+ +  +E++
Sbjct: 42  GFDPTAPDLHLGHTVLIQKLKHFQELGHQVIFLIGDFTGMIGDPSGKSETRKPLTEEEVK 101

Query: 101 EN-------IEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRM 153
            N       I KI     + I +           N  W+ ++    L+ E+ +  +V RM
Sbjct: 102 ANALTYERQIYKILDPEKTLIDF-----------NSRWMKAMSAQGLI-ELAARHTVARM 149

Query: 154 LSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLG 213
           L  E    R      +S  EF Y ++Q YD V L  +    +++GG+DQ  N++ G +L 
Sbjct: 150 LEREDFHQRFVNHAPISIHEFLYPLVQGYDSVALRAD----VELGGTDQKFNLLVGRELQ 205

Query: 214 ERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSF 272
                     LT PLL    G  KM K+L   + +++    P   +    +I D  ++ +
Sbjct: 206 REYGQEPQVVLTMPLLEGLDGVNKMSKSLGNYVGIDE---PPQEMFGKIMSISDVLMLRY 262

Query: 273 AKRLTTLPMSEIDRMAKLQGKEI---NEAKKIIATEITTMVHGREEAEKAATAAMECFDM 329
            + L+ L +  + R+       +     AK+ +A E+    H    AE+AA      F  
Sbjct: 263 YELLSDLSVGALARLKDDLASGVLHPRLAKENLAKEMVARYHSPGAAEEAARQFAAVFRE 322

Query: 330 SIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKL 389
               + +  I ++  E S  + L  ++ +AG A  T+EARR ++   ++++   +S+ +L
Sbjct: 323 GALPEEIEEICLAVTENS--IWLPKVLHQAGLAAGTSEARRLIQQGGVQVDGEKVSSVEL 380

Query: 390 QIKL 393
           ++ +
Sbjct: 381 ELPV 384


>gi|237803468|ref|ZP_04591053.1| tyrosyl-tRNA synthetase [Pseudomonas syringae pv. oryzae str. 1_6]
 gi|331025450|gb|EGI05506.1| tyrosyl-tRNA synthetase [Pseudomonas syringae pv. oryzae str. 1_6]
          Length = 399

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 96/347 (27%), Positives = 159/347 (45%), Gaps = 18/347 (5%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   +  L   Q  GH+ I L+G  T +IGDPS +  +R  +  +++ 
Sbjct: 39  GFDPTAPDLHLGHTVLINKLRQFQDLGHQVIFLIGDFTGMIGDPSGKSATRPPLTREQVL 98

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           +  E  K     F      KT+     N TW+  +   D +R + S ++V RML  +   
Sbjct: 99  DYAETYKS--QVFKILDPAKTEVAF--NSTWMDKLSPADFIR-LSSQYTVARMLERDDFD 153

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R K  QS++  EF Y ++Q YD V L  +    +++GG+DQ  N++ G +L        
Sbjct: 154 KRYKSNQSIAIHEFLYPLVQGYDSVALKAD----VELGGTDQKFNLLMGRELQRSYGQEP 209

Query: 221 LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTL 279
              LT PLL    G  KM K+L   + + +   +P   +    +I D+ +  + + L+  
Sbjct: 210 QCILTMPLLEGLDGVKKMSKSLGNYVGIQE---APGIMYSKLVSIPDSLMWRYFELLSFR 266

Query: 280 PMSEID--RMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMP 337
            M EI+  +     G    + K  +A E+    HG E A  A  +A          + +P
Sbjct: 267 SMEEINGFKADCEAGANPRDIKIKLAEELVARFHGEEAAASAHRSAGNRMKEGELPEDLP 326

Query: 338 TISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSII 384
            IS++  E    M +  ++ KAG   +   AR  L S  ++I+  ++
Sbjct: 327 EISVAAAE---DMPISAVLNKAGLVKNAAVARDLLASGGVRIDGEVV 370


>gi|302415799|ref|XP_003005731.1| tyrosyl-tRNA synthetase [Verticillium albo-atrum VaMs.102]
 gi|261355147|gb|EEY17575.1| tyrosyl-tRNA synthetase [Verticillium albo-atrum VaMs.102]
          Length = 561

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 63/187 (33%), Positives = 106/187 (56%), Gaps = 12/187 (6%)

Query: 7   DFLSILSERGFIHQIS-NPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +   I  ERGFI  ++  P  +  L     + AY+G D TA SLH GHL  +M +FW+  
Sbjct: 62  NLWEIFEERGFIKDVAGRPELIKELMRTKRIGAYVGVDPTAPSLHLGHLLPMMPVFWMYL 121

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKI----KGIFSSF----IKYG 117
            G + ++L+GG T+ IGDP+ R  SR +M + EI  NI +I    K ++ +      KYG
Sbjct: 122 HGFRAVTLVGGATARIGDPTGRTTSRAIMSNSEISTNITRIHYQMKKLWDNIELEKHKYG 181

Query: 118 TGKTDAL---MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEF 174
             KT ++   ++NN TW  S+   D+++ +G +  +  MLS ++V+++++    ++  EF
Sbjct: 182 YKKTWSMSRHLVNNNTWWQSLSMYDVMKRLGRYLRMGPMLSRDTVKTKMESGDGMAVAEF 241

Query: 175 NYMILQA 181
            Y ++QA
Sbjct: 242 MYPLMQA 248


>gi|152983821|ref|YP_001346204.1| tyrosyl-tRNA synthetase [Pseudomonas aeruginosa PA7]
 gi|150958979|gb|ABR81004.1| tyrosyl-tRNA synthetase [Pseudomonas aeruginosa PA7]
          Length = 399

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 96/347 (27%), Positives = 156/347 (44%), Gaps = 18/347 (5%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   +  L   Q  GH+ I L+G  T +IGDPS +  +R  +   ++ 
Sbjct: 39  GFDPTAPDLHLGHTVLINKLRQFQDLGHQVIFLIGDFTGMIGDPSGKSVTRPPLTRDQVL 98

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           EN E  K     F      +T+     N TW+  +   D +R + S ++V RML  +   
Sbjct: 99  ENAETYKS--QVFKILDPSRTEVAF--NSTWMDQLTPADFIR-LASQYTVARMLERDDFS 153

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R    Q ++  EF Y ++Q YD V L  +    +++GG+DQ  N++ G +L        
Sbjct: 154 KRYASNQPIAIHEFLYPLVQGYDSVALKAD----VELGGTDQKFNLLMGRELQRAYGQEA 209

Query: 221 LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTL 279
              LT PLL    G  KM K+L   I + +   +P   +    +I D  +  + + L+  
Sbjct: 210 QVILTMPLLEGLDGVKKMSKSLGNYIGIQE---APGVMYSKLVSIPDTLMWRYFELLSFR 266

Query: 280 PMSEIDRMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMP 337
            M EI+   K    G    + K  +A EI    HG E A  A  +A          + +P
Sbjct: 267 SMDEIEGFRKDVEAGANPRDIKIKLAEEIVARFHGEEAAASAHKSAGNRLKDGELPEDLP 326

Query: 338 TISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSII 384
            I +S  E    M + +++ KAG   +   AR  L +  ++++  ++
Sbjct: 327 EIELSAAE---DMPVASVLNKAGLVKNAAAARDLLGAGGVRVDGEVV 370


>gi|118602182|ref|YP_903397.1| tyrosyl-tRNA synthetase [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
 gi|118567121|gb|ABL01926.1| tyrosyl-tRNA synthetase [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
          Length = 394

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 101/365 (27%), Positives = 179/365 (49%), Gaps = 40/365 (10%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   +  L  LQ  GH+ + L+G  T++IGDP+ + ++R  +  ++IQ
Sbjct: 38  GFDPTAPDLHLGHTILINKLKQLQDLGHEILFLIGDFTAMIGDPTGKSKTRPPLSREQIQ 97

Query: 101 ENIEK-IKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           EN +   K +F    K  T      ++ N  W+  +  ++ + ++ S  +V +ML  ++ 
Sbjct: 98  ENAKSYTKQVFKILDKDKT-----TVVFNSQWMDKMTSMEFI-QLASKQTVAKMLEHDNF 151

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R K  Q++S  EF Y ++Q  D VEL  +    +++GG+DQ  N++ G +L ++    
Sbjct: 152 SKRYKSGQAISIHEFLYPLVQGNDSVELKSD----VEIGGTDQKFNLLVGRELQKQAGQE 207

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLN---KEM------TSPYNFWQYWRNIDDADV 269
           +   LT P+L    G  KM K+L+  I ++    EM       S    W+Y+      ++
Sbjct: 208 QQVILTMPILEGLDGVQKMSKSLNNYIGIDDTPDEMFGKIMSISDELMWRYF------EL 261

Query: 270 VSFA--KRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECF 327
           +SF   K +T L      + A +QGK   + K I+A EI T  H  + A++     ++ F
Sbjct: 262 LSFQSLKVITDL------KQAMMQGKNPRDIKFILADEIITRFHNIDTAKQMQQNFIDRF 315

Query: 328 DMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNE 387
                   MP   + K     G+ +  L+   G  +ST+ A + +     KIN   I+++
Sbjct: 316 ----SKNQMPD-EMDKFSFKAGIKIANLLKDTGLCSSTSNAYQMINQGGAKINGKKITDK 370

Query: 388 KLQIK 392
            L+++
Sbjct: 371 NLELE 375


>gi|88797574|ref|ZP_01113163.1| tyrosyl-tRNA synthetase [Reinekea sp. MED297]
 gi|88779746|gb|EAR10932.1| tyrosyl-tRNA synthetase [Reinekea sp. MED297]
          Length = 411

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 98/350 (28%), Positives = 168/350 (48%), Gaps = 20/350 (5%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   +  +   Q+ GH  I L+G  T +IGDP+ +  +R  +  +EI+
Sbjct: 52  GFDPTAPDLHLGHTVLINKMRQFQEMGHTVIFLIGDFTGLIGDPTGKSVTRPPLTEEEIE 111

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
            N    K       K    +   +  N+E W    K  D + ++    SV RML  +  +
Sbjct: 112 ANALTYK---EQVFKILDPEKTEVRFNSE-WFAD-KGADFMIKLAGQLSVARMLERDDFK 166

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL--GERLKT 218
            R K  QS+S  EF Y ++Q YD V L  ++    ++GG+DQ  N++ G +L  GE  + 
Sbjct: 167 KRFKANQSISIHEFLYPLVQGYDSVALEADF----ELGGTDQRFNLLMGRELQKGEG-QE 221

Query: 219 PKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT 277
           P++  +T PLL    G  KM K+L   + +N+   +P   +Q   +I D+ +  + + L+
Sbjct: 222 PQVVMMT-PLLEGLDGVKKMSKSLGNYVGINE---APGTMFQKIVSIPDSLIWRWYELLS 277

Query: 278 TLPMSEIDRMAKL--QGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQH 335
              + EI+++ +    G    + K  +A EI    HG E A  A   A          + 
Sbjct: 278 FKTLEEIEQLKQQVESGGNPRDVKIELAREIVARFHGDEAAATAHKGAGNIIQEGEVPEG 337

Query: 336 MPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIIS 385
            P + +S  E +  + +  +I KA  AT++ +A+  LK+  +K+   ++ 
Sbjct: 338 TPEVVVSL-EGAEQLPIGAIINKANLATNSAQAKDMLKNGRVKVEWDVVE 386


>gi|289623555|ref|ZP_06456509.1| tyrosyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str.
           NCPPB3681]
 gi|289650839|ref|ZP_06482182.1| tyrosyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str.
           2250]
          Length = 403

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 96/347 (27%), Positives = 158/347 (45%), Gaps = 18/347 (5%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   +  L   Q  GH+ I L+G  T +IGDPS +  +R  +  +++ 
Sbjct: 39  GFDPTAPDLHLGHTVLINKLRQFQDLGHQIIFLIGDFTGMIGDPSGKSATRPPLTREQVL 98

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           +  E  K     F      KT+     N TW+  +   D +R + S ++V RML  +   
Sbjct: 99  DYAETYKS--QVFKILDPAKTEVAF--NSTWMDKLSPADFIR-LSSQYTVARMLERDDFD 153

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R K  QS++  EF Y ++Q YD V L  +    +++GG+DQ  N++ G +L        
Sbjct: 154 KRYKSNQSIAIHEFLYPLVQGYDSVALKAD----VELGGTDQKFNLLMGRELQRAYGQEP 209

Query: 221 LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTL 279
              LT PLL    G  KM K+L   + + +   +P   +    +I D+ +  + + L+  
Sbjct: 210 QCILTMPLLEGLDGVKKMSKSLGNYVGIQE---APGIMYSKLVSIPDSLMWRYFELLSFR 266

Query: 280 PMSEIDRMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMP 337
            M EI+ +      G    + K  +A E+    HG E A  A  +A            +P
Sbjct: 267 SMEEINGLKADCEAGANPRDIKIKLAEELVARFHGEEAAANAHRSAGNRMKEGELPDDLP 326

Query: 338 TISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSII 384
            IS++  E    M +  ++ KAG   +   AR  L S  ++I+  ++
Sbjct: 327 EISVAATE---DMPISAVLNKAGLVKNAAVARDLLASGGVRIDGEVV 370


>gi|187479433|ref|YP_787458.1| tyrosyl-tRNA synthetase [Bordetella avium 197N]
 gi|114154816|sp|Q2KV13|SYY_BORA1 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|115424020|emb|CAJ50573.1| tyrosyl-tRNA synthetase [Bordetella avium 197N]
          Length = 409

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 102/393 (25%), Positives = 176/393 (44%), Gaps = 49/393 (12%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  +  LQ  GH  I L+G  TS IGDPS R+ +R  +  ++I
Sbjct: 50  LGLDPTAPDIHLGHTVVLNKMRQLQDLGHTVIFLIGDFTSTIGDPSGRNSTRPPLTREQI 109

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           + N +      S  +     +T+  +  N  W C       + ++ S ++V RM+  E  
Sbjct: 110 EHNAKTYYAQASLVLD--PARTE--IRYNSEW-CDPLGARGMIQLASRYTVARMMEREDF 164

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R K    ++  EF Y ++Q YD V L  +    L++GG+DQ  N++ G +L +     
Sbjct: 165 TRRFKTGVPIAVHEFLYPLMQGYDSVALKAD----LELGGTDQKFNLLVGRELQKEYGQE 220

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYN---------FWQY-----WRNI 264
               LT PLL    G  KM K+    I +++   S +           W+Y     +R++
Sbjct: 221 PQCILTMPLLVGTDGVDKMSKSKGNYIGISESPDSMFGKLMSISDTLMWRYFELLSFRSL 280

Query: 265 DDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAM 324
           +D   +           +EID      G+   +AK  +A EI T  H  ++AE+A     
Sbjct: 281 EDIAALK----------AEID-----AGRNPRDAKVALAQEIITRFHSAKDAEQALANFE 325

Query: 325 ECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSII 384
             F        +P ++++       MG+L ++  +    S++EA+R ++   +KI+ + I
Sbjct: 326 ARFRDGAIPDDIPEVNLA----GAPMGILHVLRASSLCASSSEAQRAIEQGGVKIDGAKI 381

Query: 385 SNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            +  LQ+      + G+  L  GK+     +L 
Sbjct: 382 EDRSLQL------NAGSYVLQVGKRKFARVNLA 408


>gi|237807358|ref|YP_002891798.1| tyrosyl-tRNA synthetase [Tolumonas auensis DSM 9187]
 gi|237499619|gb|ACQ92212.1| tyrosyl-tRNA synthetase [Tolumonas auensis DSM 9187]
          Length = 399

 Score =  115 bits (287), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 98/363 (26%), Positives = 175/363 (48%), Gaps = 32/363 (8%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  L   Q  GH+ I L+G  T+++GDPS ++ +R  +  + I
Sbjct: 38  LGMDPTAPDIHLGHTVILNKLRTFQDLGHEVILLIGDFTALVGDPSGKNATRPPLSEEAI 97

Query: 100 Q-------ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNR 152
           +       E   KI     + I+Y           N TWL  +    +++ + +  +V R
Sbjct: 98  KINALTYAEQAFKILDPARTRIEY-----------NSTWLKELGATGMIK-LAAKQTVAR 145

Query: 153 MLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL 212
           ML  +  + R    QS++  EF Y +LQ YD V L  +    +++GG+DQ  N++ G +L
Sbjct: 146 MLERDDFKKRYANGQSIAIHEFLYPLLQGYDSVALKAD----VELGGTDQKFNLLMGREL 201

Query: 213 GERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVS 271
            +    P    L  PLL    G  KM K+    I ++    +P + +    +I D  + S
Sbjct: 202 QKDAGQPAQCVLMMPLLVGLDGVKKMSKSSGNYIGVHD---APNDMFGKIMSISDELMWS 258

Query: 272 FAKRLTTLPMSEIDRM-AKLQGKEIN--EAKKIIATEITTMVHGREEAEKAATAAMECFD 328
           + + L+T P++EI +  A +   ++N  + K  +A E+    H    AE A     + F 
Sbjct: 259 YYELLSTRPLAEITQFKADIAANKLNPRDVKIWLAKELIARYHDEAAAEAAHNDFTQRFS 318

Query: 329 MSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEK 388
            +     MP ++++    + G+ +  L+ +A    +T+EA R +K NA+K +  ++++ K
Sbjct: 319 KNAIPDEMPEVTVAAP--AEGIAVGNLLKEAALVETTSEALRMIKQNAVKRDGEVVADGK 376

Query: 389 LQI 391
           L +
Sbjct: 377 LLV 379


>gi|254253229|ref|ZP_04946547.1| Tyrosyl-tRNA synthetase [Burkholderia dolosa AUO158]
 gi|124895838|gb|EAY69718.1| Tyrosyl-tRNA synthetase [Burkholderia dolosa AUO158]
          Length = 460

 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 103/373 (27%), Positives = 184/373 (49%), Gaps = 46/373 (12%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  +  LQ  GH  I L+G  TS+IGDPS R+ +R  +  ++I
Sbjct: 102 LGLDPTAPDIHIGHTVVLNKMRQLQDLGHTVIFLIGDFTSLIGDPSGRNATRPPLTREQI 161

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKY---------IDLLREIGSFFSV 150
           + N    K  F         +  AL+L+ E     I+Y          D + ++ S ++V
Sbjct: 162 EAN---AKTYF---------EQAALVLDREK--TEIRYNSEWSMPLGADGMIKLASRYTV 207

Query: 151 NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGI 210
            R+L  E    R +    +S  EF Y ++Q YD V L  N D  L++GG+DQ  N++ G 
Sbjct: 208 ARILEREDFTKRFQSGVPISIHEFLYPLMQGYDSVAL--NAD--LELGGTDQKFNLLVGR 263

Query: 211 DLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADV 269
           +L ++    +   LT PLL    G  KM K+    + ++++   P + +    +I D  +
Sbjct: 264 ELQKQYGQEQQCILTMPLLEGLDGVEKMSKSKGNYVGISEK---PNDMFGKLMSISDTLM 320

Query: 270 VSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMEC 326
             + + L+   M EI    R A+  G+   + K ++A EI    H + +AE+    A+E 
Sbjct: 321 WRYFELLSFRSMDEIAGFKREAE-SGRNPRDFKVLLAQEIVARFHSQADAER----ALED 375

Query: 327 FDMSIH---SQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSI 383
           F+          +P+++++   ++ G     L+ +AG   ST+EA R+++   +KI+ + 
Sbjct: 376 FNHRAKGGVPDDIPSVTLAGAPLAIGQ----LLKQAGLVPSTSEALRNIEQGGVKIDGAT 431

Query: 384 ISNEKLQIKLQDF 396
           +S++ L++   ++
Sbjct: 432 VSDKGLKVDAGEY 444


>gi|332142558|ref|YP_004428296.1| tyrosyl-tRNA synthetase [Alteromonas macleodii str. 'Deep ecotype']
 gi|327552580|gb|AEA99298.1| tyrosyl-tRNA synthetase [Alteromonas macleodii str. 'Deep ecotype']
          Length = 399

 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 104/400 (26%), Positives = 188/400 (47%), Gaps = 39/400 (9%)

Query: 7   DFLSILSE--RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           D+ + L+E  RG    +     ++ L S   +T   G+D TA  LH GH   +  L   Q
Sbjct: 3   DWQTALAEIKRGVDEILPEEDLIEKLKSGKTLTIKAGFDPTAPDLHLGHTVLINKLRTFQ 62

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + GHK + L+G  T +IGDP+ ++ +R+ +  +++ EN +  +       K    +   +
Sbjct: 63  QLGHKVVFLIGDFTGLIGDPTGKNVTRKPLSKEQVLENAKTYQ---EQVFKILDEEKTEI 119

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
             N+E W+  +    +++ + +  +V RML  +  + R    Q ++  EF Y ++Q +D 
Sbjct: 120 RFNSE-WMDGLGAAGMIK-LAASQTVARMLERDDFKKRYNNGQPIAIHEFLYPLVQGWDS 177

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSG 243
           V L    +  +++GG+DQ  N++ G +L +     +   +  PLL    G  KM K+L+ 
Sbjct: 178 VAL----ESDVELGGTDQRFNLLMGRELQKEQGQKQQSIVMVPLLEGLDGVQKMSKSLNN 233

Query: 244 AIWLNKEMTSPYN---------FWQYWRNIDDADVVSFAKRLTTLPMSEIDRM-AKLQGK 293
            I +       +           W+Y+      D+VSF       P+ EI  + A+++G 
Sbjct: 234 YIGITDTPNEMFGKVMSISDDLMWRYY------DLVSFR------PLEEIAELKARVEGG 281

Query: 294 E-INEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISIS-KDEVSRGMG 351
           E   + K ++A EI    H    AE A    ++ F  +     MP + I+  DE   G+ 
Sbjct: 282 ENPRDIKIMLAKEIIARFHDDAAAEGAHQDFIQRFQKNAIPDDMPELEIALSDE---GIA 338

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
           +  L+ +A    ST++A R +K  A+KIN   + + +L I
Sbjct: 339 IGNLLKEAKLVGSTSDAMRMIKQGAVKINGDKVEDTRLVI 378


>gi|330868552|gb|EGH03261.1| tyrosyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str.
           0893_23]
          Length = 398

 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 96/347 (27%), Positives = 158/347 (45%), Gaps = 18/347 (5%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   +  L   Q  GH+ I L+G  T +IGDPS +  +R  +  +++ 
Sbjct: 39  GFDPTAPDLHLGHTVLINKLRQFQDLGHQIIFLIGDFTGMIGDPSGKSATRPPLTREQVL 98

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           +  E  K     F      KT+     N TW+  +   D +R + S ++V RML  +   
Sbjct: 99  DYAETYKS--QVFKILDPAKTEVAF--NSTWMDKLSPADFIR-LSSQYTVARMLERDDFD 153

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R K  QS++  EF Y ++Q YD V L  +    +++GG+DQ  N++ G +L        
Sbjct: 154 KRYKSNQSIAIHEFLYPLVQGYDSVALKAD----VELGGTDQKFNLLMGRELQRAYGQEP 209

Query: 221 LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTL 279
              LT PLL    G  KM K+L   + + +   +P   +    +I D+ +  + + L+  
Sbjct: 210 QCILTMPLLEGLDGVKKMSKSLGNYVGIQE---APGIMYSKLVSIPDSLMWRYFELLSFR 266

Query: 280 PMSEIDRMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMP 337
            M EI+ +      G    + K  +A E+    HG E A  A  +A            +P
Sbjct: 267 SMEEINGLKADCEAGANPRDIKIKLAEELVARFHGEEAAANAHRSAGNRMKEGELPDDLP 326

Query: 338 TISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSII 384
            IS++  E    M +  ++ KAG   +   AR  L S  ++I+  ++
Sbjct: 327 EISVAATE---DMPISAVLNKAGLVKNAAVARDLLASGGVRIDGEVV 370


>gi|28867837|ref|NP_790456.1| tyrosyl-tRNA synthetase [Pseudomonas syringae pv. tomato str.
           DC3000]
 gi|301381481|ref|ZP_07229899.1| tyrosyl-tRNA synthetase [Pseudomonas syringae pv. tomato Max13]
 gi|302058570|ref|ZP_07250111.1| tyrosyl-tRNA synthetase [Pseudomonas syringae pv. tomato K40]
 gi|302132204|ref|ZP_07258194.1| tyrosyl-tRNA synthetase [Pseudomonas syringae pv. tomato NCPPB
           1108]
 gi|81732643|sp|Q889Y8|SYY_PSESM RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|28851073|gb|AAO54151.1| tyrosyl-tRNA synthetase [Pseudomonas syringae pv. tomato str.
           DC3000]
          Length = 403

 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 97/347 (27%), Positives = 158/347 (45%), Gaps = 18/347 (5%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   +  L   Q  GH+ I L+G  T +IGDPS +  +R  +  +++ 
Sbjct: 39  GFDPTAPDLHLGHTVLINKLRQFQDLGHQVIFLIGDFTGMIGDPSGKSATRPPLTREQVL 98

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           +  E  K     F      KT+     N TW+  +   D +R + S ++V RML  +   
Sbjct: 99  DYAETYKS--QVFKILDPAKTEVAF--NSTWMDKLSPADFIR-LSSQYTVARMLERDDFD 153

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R K  QS++  EF Y ++Q YD V L  +    +++GG+DQ  N++ G +L        
Sbjct: 154 KRYKSNQSIAIHEFLYPLVQGYDSVALKAD----VELGGTDQKFNLLMGRELQRAYGQEP 209

Query: 221 LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTL 279
              LT PLL    G  KM K+L   + + +   +P   +    +I D+ +  + + L+  
Sbjct: 210 QCILTMPLLEGLDGVKKMSKSLGNYVGIQE---APGIMYSKLVSIPDSLMWRYFELLSFR 266

Query: 280 PMSEID--RMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMP 337
            M EI+  R     G    + K  +A E+    HG E A  A  +A            +P
Sbjct: 267 SMEEINGLRADCEAGANPRDIKIKLAEELVARFHGEEAAATAHRSAGNRMKEGELPDDLP 326

Query: 338 TISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSII 384
            IS++  E    M +  ++ KAG   +   AR  L S  ++I+  ++
Sbjct: 327 EISVAAIE---DMPISAVLNKAGLVKNAAVARDLLASGGVRIDGEVV 370


>gi|330961004|gb|EGH61264.1| tyrosyl-tRNA synthetase [Pseudomonas syringae pv. maculicola str.
           ES4326]
          Length = 399

 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 96/347 (27%), Positives = 158/347 (45%), Gaps = 18/347 (5%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   +  L   Q  GH+ I L+G  T +IGDPS +  +R  +  +++ 
Sbjct: 39  GFDPTAPDLHLGHTVLINKLRQFQDLGHQVIFLIGDFTGMIGDPSGKSATRPPLTREQVL 98

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           +  E  K     F      KT+     N TW+  +   D +R + S ++V RML  +   
Sbjct: 99  DYAETYKS--QVFKILDPAKTEVAF--NSTWMDKLSPADFIR-LSSQYTVARMLERDDFD 153

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R K  QS++  EF Y ++Q YD V L  +    +++GG+DQ  N++ G +L        
Sbjct: 154 KRYKSNQSIAIHEFLYPLVQGYDSVALKAD----VELGGTDQKFNLLMGRELQRSYGQEP 209

Query: 221 LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTL 279
              LT PLL    G  KM K+L   + + +   +P   +    +I D+ +  + + L+  
Sbjct: 210 QCILTMPLLEGLDGVKKMSKSLGNYVGIQE---APGIMYSKLVSIPDSLMWRYFELLSFR 266

Query: 280 PMSEID--RMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMP 337
            M EI+  +     G    + K  +A E+    HG E A  A  +A            +P
Sbjct: 267 SMEEINGFKADCEAGANPRDIKIKLAEELVARFHGEEAAANAHRSAGNRMKEGELPADLP 326

Query: 338 TISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSII 384
            IS++    S  M +  ++ KAG   +   AR  L S  ++I+  ++
Sbjct: 327 EISVT---ASEDMPISAVLNKAGLVKNAAVARDLLASGGVRIDGEVV 370


>gi|167904237|ref|ZP_02491442.1| tyrosyl-tRNA synthetase [Burkholderia pseudomallei NCTC 13177]
          Length = 413

 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 98/364 (26%), Positives = 179/364 (49%), Gaps = 28/364 (7%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  +  LQ  GH  I L+G  TS+IGDPS R+ +R  +  ++I
Sbjct: 55  LGLDPTAPDIHLGHTVVLNKMRQLQDLGHTVIFLIGDFTSLIGDPSGRNATRPPLTREQI 114

Query: 100 QENIEKIKGIF-SSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
           + N    K  F  + +     KT+  +  N  W   +   D + ++ S ++V R+L  E 
Sbjct: 115 ESN---AKTYFEQAALVLDRAKTE--IRYNSEWSMPLG-ADGMIKLASRYTVARILERED 168

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
              R +    +S  EF Y ++Q YD V L    +  L++GG+DQ  N++ G +L ++   
Sbjct: 169 FTKRFQGGIPISIHEFLYPLMQGYDSVAL----NADLELGGTDQKFNLLVGRELQKQYGQ 224

Query: 219 PKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT 277
            +   LT PLL    G  KM K+    + ++++   P + +    +I D  +  + + L+
Sbjct: 225 EQQCILTMPLLEGLDGVEKMSKSKGNYVGISEK---PTDMFGKLMSISDVLMWRYFELLS 281

Query: 278 TLPMSEIDRM--AKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIH--- 332
              + EI R       G+   + K ++A EI    H + +AE+    A+E F+       
Sbjct: 282 FRSLDEIARFRGEAEGGRNPRDFKVMLAQEIVARFHSQADAER----ALEDFNHRAKGGV 337

Query: 333 SQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
              +P ++++   ++ G     L+ +AG   ST+EA R+++   +KI+ + +S++ L++ 
Sbjct: 338 PDDIPAVTLAGAPLAIGQ----LLKQAGLVPSTSEALRNIEQGGVKIDGATVSDKALKVD 393

Query: 393 LQDF 396
             +F
Sbjct: 394 AGEF 397


>gi|123966723|ref|YP_001011804.1| tyrosyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9515]
 gi|123201089|gb|ABM72697.1| Tyrosyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9515]
          Length = 412

 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 104/389 (26%), Positives = 189/389 (48%), Gaps = 48/389 (12%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D T + +H GH      L   Q  GH  + ++G  T+ IGDP+ ++++R  +  +E+
Sbjct: 46  LGIDPTGTDIHLGHSILFRKLRAFQDNGHVAVLIIGDFTAQIGDPTGKNKTRVQLSEEEV 105

Query: 100 QENIEKIKGIFSSFIKYGTGK-TDALMLN-----------NETWLCSIKYIDLLREIGSF 147
           +EN +      +   + G GK +D  +L+           N  WL ++    ++  +G  
Sbjct: 106 KENSK------TYLNQLGMGKSSDKSILDFESEDRIEIRYNSEWLKNLDLNSIIELMGR- 158

Query: 148 FSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNII 207
            +V++ML+ E    R   +  ++  EF Y +LQ YD V +    +  +++GG+DQ  NI 
Sbjct: 159 STVSQMLAKEEFNKRYNDQTPIALHEFLYPLLQGYDSVIV----NSDIELGGTDQKFNIA 214

Query: 208 CGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDD 266
            G DL    K    + +  P+LT   G  KM K+    + L+++  S Y+  +    + D
Sbjct: 215 IGRDLQRHFKKEPQYGILLPILTGLDGIKKMSKSEFNTVGLSEDSLSMYSKLE---KVPD 271

Query: 267 ADVVSFAKRLTTLPMSEIDRMAKLQGKEIN--EAKKIIATEITTMVHGREEAEKAATAAM 324
             + S+ + LT L +S I        KE N  + ++++A E+T++ HG++EA KA +   
Sbjct: 272 QLIPSYFELLTELDLSFI--------KETNPRDLQRLMALEVTSLYHGKKEALKAQSNCE 323

Query: 325 ECF-DMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSI 383
           + F  +      +P IS+   E+   + L  L+       S++E++R +K   +KI+++ 
Sbjct: 324 KIFLGLKEKVGDIPIISLK--EIVFPVKLFYLLSSLNLFKSSSESKRSIKGGGVKIDSNK 381

Query: 384 ISNEKLQIKLQDFDSTGNIK---LSFGKK 409
           + N  L      FDS   +K   L  GKK
Sbjct: 382 LVNPDLV-----FDSKEALKGKILQIGKK 405


>gi|331017519|gb|EGH97575.1| tyrosyl-tRNA synthetase [Pseudomonas syringae pv. lachrymans str.
           M302278PT]
          Length = 399

 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 97/347 (27%), Positives = 158/347 (45%), Gaps = 18/347 (5%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   +  L   Q  GH+ I L+G  T +IGDPS +  +R  +  +++ 
Sbjct: 39  GFDPTAPDLHLGHTVLINKLRQFQDLGHQVIFLIGDFTGMIGDPSGKSATRPPLTREQVL 98

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           +  E  K     F      KT+     N TW+  +   D +R + S ++V RML  +   
Sbjct: 99  DYAETYKS--QVFKILDPAKTEVAF--NSTWMDKLSPADFIR-LSSQYTVARMLERDDFD 153

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R K  QS++  EF Y ++Q YD V L  +    +++GG+DQ  N++ G +L        
Sbjct: 154 KRYKSNQSIAIHEFLYPLVQGYDSVALKAD----VELGGTDQKFNLLMGRELQRAYGQEP 209

Query: 221 LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTL 279
              LT PLL    G  KM K+L   + + +   +P   +    +I D+ +  + + L+  
Sbjct: 210 QCILTMPLLEGLDGVKKMSKSLGNYVGIQE---APGIMYSKLVSIPDSLMWRYFELLSFR 266

Query: 280 PMSEID--RMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMP 337
            M EI+  R     G    + K  +A E+    HG E A  A  +A            +P
Sbjct: 267 SMEEINGLRADCEAGANPRDIKIKLAEELVARFHGEEAAATAHRSAGNRMKEGELPDDLP 326

Query: 338 TISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSII 384
            IS++  E    M +  ++ KAG   +   AR  L S  ++I+  ++
Sbjct: 327 EISVAAIE---DMPISAVLNKAGLVKNAAVARDLLASGGVRIDGEVV 370


>gi|254246315|ref|ZP_04939636.1| Tyrosyl-tRNA synthetase, class Ib [Burkholderia cenocepacia PC184]
 gi|124871091|gb|EAY62807.1| Tyrosyl-tRNA synthetase, class Ib [Burkholderia cenocepacia PC184]
          Length = 475

 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 99/364 (27%), Positives = 183/364 (50%), Gaps = 28/364 (7%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  +  LQ  GH  I L+G  TS+IGDPS R+ +R  +  ++I
Sbjct: 117 LGLDPTAPDIHIGHTVVLNKMRQLQDLGHTVIFLIGDFTSLIGDPSGRNATRPPLTREQI 176

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           + N +       + +     KT+  +  N  W   +   D + ++ S ++V R+L  E  
Sbjct: 177 ESNAKTY--FEQAALVLDRDKTE--IRYNSEWSMPLG-ADGMIKLASRYTVARILEREDF 231

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R +    +S  EF Y ++Q YD V L  N D  L++GG+DQ  N++ G +L ++    
Sbjct: 232 TKRFQGGVPISIHEFLYPLMQGYDSVAL--NAD--LELGGTDQKFNLLVGRELQKQYGQE 287

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
           +   LT PLL    G  KM K+    + ++++   P + +    +I D  +  + + L+ 
Sbjct: 288 QQCILTMPLLEGLDGVEKMSKSKGNYVGISEK---PTDMFGKLMSISDTLMWRYFELLSF 344

Query: 279 LPMSEI---DRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIH--- 332
             + EI    R A+  G+   + K ++A EI    H + +AE+    A+E F+       
Sbjct: 345 RSLDEIAGFKREAE-GGRNPRDFKVLLAQEIVARFHSQPDAER----ALEDFNHRAKGGV 399

Query: 333 SQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
              +P+++++   ++ G     L+ +AG   ST+EA R+++   +KI+ + +S++ L+++
Sbjct: 400 PDDIPSVTLAGAPLAIGQ----LLKQAGLVPSTSEALRNIEQGGVKIDGATVSDKGLKVE 455

Query: 393 LQDF 396
             +F
Sbjct: 456 AGEF 459


>gi|40062628|gb|AAR37557.1| tyrosyl-tRNA synthetase [uncultured marine bacterium 311]
          Length = 397

 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 101/367 (27%), Positives = 170/367 (46%), Gaps = 41/367 (11%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G+D TA  LH GH   L  L   Q  GH+ I L+G  T ++GDPS  +E+R ++  +EI
Sbjct: 36  LGFDPTAPDLHLGHTVILNKLKLFQDLGHQVIFLIGDFTGLVGDPSGVNETRPVLSEKEI 95

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           ++N    K       K    K   +  N+E W+      + +R + S  +V RML  +  
Sbjct: 96  KKN---AKTYERQVFKILDKKKTEIRFNSE-WMNKFSPEEFIR-LSSVQTVARMLERDDF 150

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R   ++ +S  EF Y +LQ YD V L    +  +++GG+DQ  N++ G ++ +     
Sbjct: 151 HKRYTSQKPISIHEFLYPLLQGYDSVAL----NADVELGGTDQKFNLLLGREVQKFYGKE 206

Query: 220 KLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYN---------FWQYWRNIDDADV 269
                T PLL    G  KM K+L   I +       +           W+Y+      ++
Sbjct: 207 PQVIFTLPLLEGLDGDKKMSKSLGNYIAIEDSQNEIFGKIMSISDELMWRYF------EL 260

Query: 270 VSFAKRLTTLPMSEIDRMAKLQGKEIN--EAKKIIATEITTMVHGREEAEKAATAAMECF 327
           +SF K+       EI+++ K Q + +N  + K ++A EI    HG    E +   A E F
Sbjct: 261 LSFKKQ------EEINKLKKSQKEGLNPRDIKFLLAEEIVDRFHG----EGSGNKAREEF 310

Query: 328 DMSIHSQHMPTISISKDEV---SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSII 384
                  + P+  I + E+    + + L  ++ +AG  +ST+EA R +K   ++I    I
Sbjct: 311 KSRFQQGNSPS-EIKEIEIKLMEKDISLPKILKEAGMVSSTSEALRLIKQGGVRIEGKKI 369

Query: 385 SNEKLQI 391
            + K +I
Sbjct: 370 LDSKYKI 376


>gi|169831527|ref|YP_001717509.1| tyrosyl-tRNA synthetase [Candidatus Desulforudis audaxviator
           MP104C]
 gi|169638371|gb|ACA59877.1| tyrosyl-tRNA synthetase [Candidatus Desulforudis audaxviator
           MP104C]
          Length = 432

 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 97/358 (27%), Positives = 167/358 (46%), Gaps = 27/358 (7%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  L   Q  GH+   ++G  T+ +GDPS + E+R+ +  +E+
Sbjct: 70  LGLDPTAPDIHLGHTVVLHKLRHFQDLGHQVTLVLGDYTARVGDPSGKTETRKPLTGEEV 129

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
             N    +   +   K        +  N+E WL  + +  +L E+ S ++V RML  +  
Sbjct: 130 MANARTYE---AQVFKILDPNRTRVRFNSE-WLAPLDFAAVL-ELASKYTVARMLERDDF 184

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R      +S  EF Y ++Q YD V L  +    +++GG+DQ  N++ G  L +     
Sbjct: 185 AKRFHGGLPISIHEFFYPLMQGYDSVALKAD----VELGGTDQKFNLLMGRTLQKEYGQE 240

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
              ALT+PLL    G  KM K+L   I + +    P   +    ++ D  +V + + +T 
Sbjct: 241 PQVALTTPLLEGLDGVHKMSKSLGNYIGITE---PPEEMYGKLMSLSDDLMVRYFELVTP 297

Query: 279 LPMSEIDRM-AKLQGKEIN--EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQH 335
           + + E+  +   L+   ++  + K  +A  +    HG+    KAA  A + F      + 
Sbjct: 298 VSLEELRALKTGLETGTVHPRDLKMRLARTVVETYHGK----KAAAVAEDEFRKVFQQRE 353

Query: 336 MPTISISKDEVSRG------MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNE 387
           +PT  I    V  G      + L  L+V AG  +ST+EARR +   A+K++   + +E
Sbjct: 354 LPT-DIPDFPVPAGALTGGRIWLPKLLVLAGLCSSTSEARRLIGQGAVKVDEQRVVDE 410


>gi|146281152|ref|YP_001171305.1| tyrosyl-tRNA synthetase [Pseudomonas stutzeri A1501]
 gi|145569357|gb|ABP78463.1| tyrosyl-tRNA synthetase [Pseudomonas stutzeri A1501]
 gi|327479307|gb|AEA82617.1| tyrosyl-tRNA synthetase [Pseudomonas stutzeri DSM 4166]
          Length = 399

 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 92/350 (26%), Positives = 160/350 (45%), Gaps = 18/350 (5%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   +  +  LQ+ GH+ + L+G  T +IGDPS +  +R  +   ++ 
Sbjct: 39  GFDPTAPDLHLGHTVLINKMRQLQELGHQVVFLIGDFTGMIGDPSGKSATRPPLTRDQVL 98

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           EN E  K     F      +T+     N TW+  +   D +R + S ++V RML  +   
Sbjct: 99  ENAETYKA--QVFKILDPARTEVAF--NSTWMDQLSPADFIR-LASQYTVARMLERDDFS 153

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R    Q ++  EF Y ++Q YD V L  +    +++GG+DQ  N++ G +L      P 
Sbjct: 154 KRYSTNQPIAIHEFLYPLVQGYDSVALKAD----IELGGTDQKFNLLMGRELQRAYGQPS 209

Query: 221 LFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTL 279
              +T PLL    G  KM K+L   + + +   +P   +    +I D+ +  + + L+  
Sbjct: 210 QCVVTMPLLEGLDGIKKMSKSLGNYVGIQE---APGVMYSKLVSIPDSLMWRYFELLSFR 266

Query: 280 PMSEID--RMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMP 337
              EI   R    +G    + K  +A EI    HG E A  A  +A          + +P
Sbjct: 267 SEEEIAEFRSDVSRGANPRDIKIKLAEEIVARFHGDEAAATAHRSAGNRMKDGELPEDLP 326

Query: 338 TISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNE 387
            I +  ++    M + +++ KAG   +   AR  L S  ++++  ++  +
Sbjct: 327 QIDLVSEQ---DMPIASVLNKAGLVKNAAMARDLLGSGGVRVDGKVVDRD 373


>gi|82705307|ref|XP_726917.1| tyrosyl-tRNA synthetase [Plasmodium yoelii yoelii str. 17XNL]
 gi|23482519|gb|EAA18482.1| Tyrosyl-tRNA synthetase [Plasmodium yoelii yoelii]
          Length = 362

 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 59/150 (39%), Positives = 90/150 (60%), Gaps = 7/150 (4%)

Query: 138 IDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQM 197
           ID L   G  F +N++L  ESV  + + ++ L+  + NY+ LQAYDF+ L K Y+  +Q+
Sbjct: 3   IDFLNH-GGHFGINKLLRKESVIKKYQNKK-LTLKDLNYISLQAYDFLYLFKKYNTYIQI 60

Query: 198 GGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL-----SGAIWLNKEMT 252
           GGSDQWGNI  GI+  + +   +L+ LT+ LL   +  K  K+L        IW++ E T
Sbjct: 61  GGSDQWGNIQSGIEFCQNIYNKQLYGLTTNLLLYKNNIKFSKSLFHENKKLPIWIDTEYT 120

Query: 253 SPYNFWQYWRNIDDADVVSFAKRLTTLPMS 282
           SPY FW ++RN++D  V S+   LT L ++
Sbjct: 121 SPYLFWNFFRNVEDQKVQSYIDMLTNLNIN 150


>gi|54307738|ref|YP_128758.1| tyrosyl-tRNA synthetase [Photobacterium profundum SS9]
 gi|81400172|sp|Q6LUR9|SYY_PHOPR RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|46912161|emb|CAG18956.1| putative tyrosyl-tRNA synthetase [Photobacterium profundum SS9]
          Length = 395

 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 92/353 (26%), Positives = 162/353 (45%), Gaps = 20/353 (5%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  L   Q+ GH    L+G  T ++GDP+ ++ +R  +  +++
Sbjct: 38  LGADPTAPDIHLGHTVILNKLRTFQELGHDVTFLIGDFTGMVGDPTGKNTTRPPLTREDV 97

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
             N E  K      +     K +     N TWL  +    ++R + S  +V RML  +  
Sbjct: 98  LANAETYKEQVFKILDPAKTKIEF----NSTWLSELGAEGMIR-LASNQTVARMLERDDF 152

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
           + R    + ++  EF Y +LQ YD V +    +  +++GG+DQ  N++ G +L +     
Sbjct: 153 KKRYNGGRPIAIHEFMYPLLQGYDSVAM----ETDVELGGTDQKFNLLMGRELQKSHGQK 208

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               LT PLL    G  KM K+    I +++    P   +    +I D  + ++ + L+ 
Sbjct: 209 PQVVLTMPLLVGLDGVKKMSKSAHNYIGVSE---VPTEMFGKIMSISDDLMWNYFECLSF 265

Query: 279 LPMSEIDRMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM 336
            P+ EI++  +    GK   + K ++A EI    H   +A+ A    +  F      + M
Sbjct: 266 RPLEEIEQFKQDMANGKNPRDVKILLAKEIIARFHSEADADAAEQEFINRFQKGAMPEEM 325

Query: 337 PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKL 389
           P +     E   G+ +  L+  AG   ST++A R ++    KI+ + I + KL
Sbjct: 326 PEL-----EFEAGIAISNLLKDAGLVNSTSDAMRMIRQGGAKIDGNKIEDTKL 373


>gi|148244298|ref|YP_001218992.1| tyrosyl-tRNA synthetase [Candidatus Vesicomyosocius okutanii HA]
 gi|146326125|dbj|BAF61268.1| tyrosyl-tRNA synthetase [Candidatus Vesicomyosocius okutanii HA]
          Length = 394

 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 98/354 (27%), Positives = 171/354 (48%), Gaps = 22/354 (6%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D T   LH GH   +  L  LQ  GH+ + L+G  T++IGDP+ + ++R  +  +++Q
Sbjct: 38  GFDPTTPDLHLGHTVVINKLKQLQNLGHEILFLIGDFTAMIGDPTGKSKTRPPLSKKQVQ 97

Query: 101 ENIEK-IKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           EN +   K IF    K    KT  +   N  W+  +K I+ + ++ S  ++ R+L  +  
Sbjct: 98  ENAKSYTKQIFKILDK---NKTKVVF--NFQWMDKMKPIEFI-QLASKQTIARILERDDF 151

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R K  QS+S  EF Y ++Q  D VEL  +    +++GG+DQ  N++ G +L ++    
Sbjct: 152 SKRYKSGQSISTHEFLYPLIQGNDSVELQSD----VEVGGTDQKFNLLVGRELQKQAGQE 207

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
           +   LT P+L    G  KM K+L   I +N     P   +    +I D  +  + + L+ 
Sbjct: 208 QQVILTMPILEGLDGVQKMSKSLDNYIGIN---ALPDEMFGKIMSISDDLMWRYFELLSF 264

Query: 279 LPMSEIDRMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM 336
             +  I  + +  +QGK   + K ++A EI T  +  + A++A    +  F  +     M
Sbjct: 265 QSLEAITNLKQTIVQGKNPRDIKFVLANEIVTRFYKVDVAKEAQQNFINRFSKNQTPNKM 324

Query: 337 PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQ 390
              S        G+ +  L+   G   ST+ A + +K   +KINN  I+N+  +
Sbjct: 325 NEFSFKA-----GIKIANLLKDTGLCFSTSNAYQMIKQGGVKINNIKITNKNFE 373


>gi|134294761|ref|YP_001118496.1| tyrosyl-tRNA synthetase [Burkholderia vietnamiensis G4]
 gi|134137918|gb|ABO53661.1| tyrosyl-tRNA synthetase [Burkholderia vietnamiensis G4]
          Length = 413

 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 98/364 (26%), Positives = 180/364 (49%), Gaps = 28/364 (7%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  +  LQ  GH  I L+G  TS+IGDPS R+ +R  +  ++I
Sbjct: 55  LGLDPTAPDIHIGHTVVLNKMRQLQDLGHTVIFLIGDFTSLIGDPSGRNATRPPLTREQI 114

Query: 100 QENIEKIKGIFS-SFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
           + N    K  F  + +     KT+  +  N  W   +   D + ++ S ++V R+L  E 
Sbjct: 115 ESN---AKTYFDQAALVLDRDKTE--IRYNSEWSMPLG-ADGMIKLASRYTVARILERED 168

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
              R +    +S  EF Y ++Q YD V L    +  L++GG+DQ  N++ G +L ++   
Sbjct: 169 FTKRFQSGIPISIHEFLYPLMQGYDSVAL----NADLELGGTDQKFNLLVGRELQKQYGQ 224

Query: 219 PKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT 277
            +   LT PLL    G  KM K+    + ++++   P + +    +I D  +  + + L+
Sbjct: 225 EQQCILTMPLLEGLDGVEKMSKSKGNYVGISEK---PTDMFGKLMSISDTLMWRYFELLS 281

Query: 278 TLPMSEID--RMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIH--- 332
              + EI   R     G+   + K ++A EI    H + +AE+    A+E F+       
Sbjct: 282 FRSLDEIAGFRREAEGGRNPRDFKVLLAQEIVARFHSQADAER----ALEDFNHRAKGGV 337

Query: 333 SQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
              +P+++++   ++ G     L+ +AG   ST+EA R+++   +KI+ + +S++ L++ 
Sbjct: 338 PDDIPSVTLAGAPLAIGQ----LLKQAGLVPSTSEALRNIEQGGVKIDGATVSDKGLKVD 393

Query: 393 LQDF 396
             +F
Sbjct: 394 AGEF 397


>gi|320325937|gb|EFW81996.1| tyrosyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str.
           B076]
          Length = 403

 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 96/347 (27%), Positives = 158/347 (45%), Gaps = 18/347 (5%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   +  L   Q  GH+ I L+G  T +IGDPS +  +R  +  +++ 
Sbjct: 39  GFDPTAPDLHLGHTVLINKLRQFQDLGHQIIFLIGDFTGMIGDPSGKSATRPPLTREQVL 98

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           +  E  K     F      KT+     N TW+  +   D +R + S ++V RML  +   
Sbjct: 99  DYAETYKS--QVFKILDPAKTEVAF--NSTWMDKLSPADFIR-LSSQYTVARMLERDDFD 153

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R K  QS++  EF Y ++Q YD V L  +    +++GG+DQ  N++ G +L        
Sbjct: 154 KRYKSNQSIAIHEFLYPLVQGYDSVALKAD----VELGGTDQKFNLLMGRELQRAYGQEP 209

Query: 221 LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTL 279
              LT PLL    G  KM K+L   + + +   +P   +    +I D+ +  + + L+  
Sbjct: 210 QCILTMPLLEGLDGVKKMSKSLGNYVGIQE---APGIMYSKLVSIPDSLMWRYFELLSFR 266

Query: 280 PMSEIDRMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMP 337
            M EI+ +      G    + K  +A E+    HG E A  A  +A            +P
Sbjct: 267 SMEEINGLKADCEAGANPRDIKIKLAEELVARFHGEEAAANAHRSAGNRMKEGELPDDLP 326

Query: 338 TISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSII 384
            IS++  E    M +  ++ KAG   +   AR  L S  ++I+  ++
Sbjct: 327 EISVAAIE---DMPISAVLNKAGLVKNAAVARDLLASGGVRIDGEVV 370


>gi|330938384|gb|EGH42010.1| tyrosyl-tRNA synthetase [Pseudomonas syringae pv. pisi str. 1704B]
          Length = 399

 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 96/347 (27%), Positives = 158/347 (45%), Gaps = 18/347 (5%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   +  L   Q  GH+ I L+G  T +IGDPS +  +R  +  +++ 
Sbjct: 39  GFDPTAPDLHLGHTVLINKLRQFQDLGHQIIFLIGDFTGMIGDPSGKSATRPPLTREQVL 98

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           +  E  K     F      KT+     N TW+  +   D +R + S ++V RML  +   
Sbjct: 99  DYAETYKS--QVFKILDPAKTEVAF--NSTWMDQLSPADFIR-LSSQYTVARMLERDDFD 153

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R K  QS++  EF Y ++Q YD V L  +    +++GG+DQ  N++ G +L        
Sbjct: 154 KRYKSNQSIAIHEFLYPLVQGYDSVALKAD----VELGGTDQKFNLLMGRELQRAYGQEP 209

Query: 221 LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTL 279
              LT PLL    G  KM K+L   + + +   +P   +    +I D+ +  + + L+  
Sbjct: 210 QCILTMPLLEGLDGVKKMSKSLGNYVGIQE---APGIMYSKLVSIPDSLMWRYFELLSFR 266

Query: 280 PMSEIDRMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMP 337
            M EI  +      G    + K  +A E+    HG E A  A  +A            +P
Sbjct: 267 SMEEIKGLKADCEAGANPRDIKIKLAEELVARFHGEEAAANAHRSAGNRMKEGELPDDLP 326

Query: 338 TISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSII 384
            IS++  E    M +  ++ KAG   +   AR  L S +++I+  ++
Sbjct: 327 EISVAAAE---DMPISAVLNKAGLVKNAAVARDLLASGSVRIDGEVV 370


>gi|189485312|ref|YP_001956253.1| tyrosyl-tRNA synthetase [uncultured Termite group 1 bacterium
           phylotype Rs-D17]
 gi|170287271|dbj|BAG13792.1| tyrosyl-tRNA synthetase [uncultured Termite group 1 bacterium
           phylotype Rs-D17]
          Length = 388

 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 101/347 (29%), Positives = 165/347 (47%), Gaps = 32/347 (9%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D T S LH GH   +  L   Q  GH+ + L+G  T+ IGDPS R E R +M  ++I
Sbjct: 35  LGIDPTTSDLHLGHTVIINKLKTFQDLGHQIVFLIGDFTARIGDPSGRSEMRPVMTDEQI 94

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           + N       ++  I     +    ++ N  WL  +    LL  + +  +V +ML  +  
Sbjct: 95  KNNAR----TYADQIFKILNRDKTEIVYNSKWLSELGVKGLL-NLAAKSTVAQMLVRDDF 149

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
           + R K +  LS +EF Y +LQAYD V L    +  +++GGSDQ  N++ G ++       
Sbjct: 150 KKRYKEDSPLSIVEFLYPLLQAYDSVVL----NADVELGGSDQKFNLLLGREIQRDYGIK 205

Query: 220 KL-FALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT 277
            +   +T PLL    GT KM K+    I LN    SP + +    +I D  +  + + LT
Sbjct: 206 DVQVVITMPLLEGTDGTKKMSKSYKNCIALN---DSPEDMFGKIMSISDELMCRYHELLT 262

Query: 278 TLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMP 337
            + ++ +  M         EAK  +A E+    +G    ++ A  A E FD     +++P
Sbjct: 263 QIDLNVVKNMHP------KEAKSALAKELVERYYG----KEEALKAEEEFDKIFSKKNIP 312

Query: 338 T----ISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKIN 380
                  I  +E+     L  L+VK+G  +S NEARR ++   ++I+
Sbjct: 313 NDIGEYRIKDEEIK----LSDLLVKSGMISSRNEARRIIEQGGVRID 355


>gi|37523984|ref|NP_927361.1| tyrosyl-tRNA synthetase [Gloeobacter violaceus PCC 7421]
 gi|81708138|sp|Q7ND21|SYY_GLOVI RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|35214990|dbj|BAC92356.1| tyrosyl tRNA synthetase [Gloeobacter violaceus PCC 7421]
          Length = 402

 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 104/376 (27%), Positives = 177/376 (47%), Gaps = 28/376 (7%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D T   LH GH   L  L   Q  GH  I L+GG T+ IGDP+ + E+R  + + E+
Sbjct: 43  LGIDPTRPDLHLGHTVVLRKLREFQDLGHTAILLIGGFTAQIGDPTGKSEARPRLSAAEV 102

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           +E  E         + + T +    + NN  WL  +    +++ + S  SV +ML+ E  
Sbjct: 103 EEYAETYLDQARLILNFDTLE----VRNNTEWLSGLDLAAIIKLLAS-TSVAQMLAKEDF 157

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R +   ++   EF Y ++Q YD V L    D  +++GG+DQ  N++ G +L E     
Sbjct: 158 GQRYEAGTAIYLHEFLYPLMQGYDSVAL----DADIELGGTDQRFNLLMGRNLQELFGKK 213

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
              ALT PLL    G  KM K+L   + + ++   P   +       DA V ++ + LT 
Sbjct: 214 PQLALTVPLLVGLDGVKKMSKSLDNYVGVTED---PLTMYSKLEKTPDALVETYFELLTD 270

Query: 279 LPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS----Q 334
           L +S +    +       E +K +A  +T  +H  E+A +A  AA      S  +    +
Sbjct: 271 LSVSALSANPR-------ERQKRLALAVTGWLHSPEQALRAQEAAAAMVTGSGGTGADLE 323

Query: 335 HMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
            +P  S++  E++  + L  L+  AG   + +E  R +K+ A+++N   I++       +
Sbjct: 324 AVPEFSLT--EIAFPVRLANLLKAAGLCPTVSEGMRQIKNGAVRLNQERITDPNCGFA-E 380

Query: 395 DFDSTGNIKLSFGKKN 410
             + TG + L  GKK+
Sbjct: 381 AAELTGAV-LQVGKKH 395


>gi|171319634|ref|ZP_02908728.1| tyrosyl-tRNA synthetase [Burkholderia ambifaria MEX-5]
 gi|171095125|gb|EDT40131.1| tyrosyl-tRNA synthetase [Burkholderia ambifaria MEX-5]
          Length = 413

 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 101/373 (27%), Positives = 184/373 (49%), Gaps = 46/373 (12%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  +  LQ  GH  I L+G  TS+IGDPS R+ +R  +  ++I
Sbjct: 55  LGLDPTAPDIHIGHTVVLNKMRQLQDLGHTVIFLIGDFTSLIGDPSGRNATRPPLTREQI 114

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKY---------IDLLREIGSFFSV 150
           + N    K  F         +  AL+L+ E     I+Y          D + ++ S ++V
Sbjct: 115 ESN---AKTYF---------EQAALVLDREK--TEIRYNSEWSMPLGADGMIKLASRYTV 160

Query: 151 NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGI 210
            R+L  E    R +    +S  EF Y ++Q YD V L    +  L++GG+DQ  N++ G 
Sbjct: 161 ARILEREDFTKRFQGGVPISIHEFLYPLMQGYDSVAL----NADLELGGTDQKFNLLVGR 216

Query: 211 DLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADV 269
           +L ++    +   LT PLL    G  KM K+    + ++++   P + +    +I D  +
Sbjct: 217 ELQKQYGQEQQCILTMPLLEGLDGVEKMSKSKGNYVGISEK---PTDMFGKLMSISDTLM 273

Query: 270 VSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMEC 326
             + + L+   + EI    R A+  G+   + K ++A EI    H + +AE+    A+E 
Sbjct: 274 WRYFELLSFRSLDEIAGFKRDAE-GGRNPRDFKVLLAQEIVARFHSQADAER----ALED 328

Query: 327 FDMSIH---SQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSI 383
           F+          +P+++++   ++ G     L+ +AG   ST+EA R+++   +KI+ + 
Sbjct: 329 FNHRAKGGVPDDIPSVTLAGAPLAIGQ----LLKQAGLVPSTSEALRNIEQGGVKIDGAT 384

Query: 384 ISNEKLQIKLQDF 396
           +S++ L+++  +F
Sbjct: 385 VSDKGLKVEAGEF 397


>gi|119509109|ref|ZP_01628260.1| tyrosyl-tRNA synthetase [Nodularia spumigena CCY9414]
 gi|119466275|gb|EAW47161.1| tyrosyl-tRNA synthetase [Nodularia spumigena CCY9414]
          Length = 435

 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 97/396 (24%), Positives = 175/396 (44%), Gaps = 42/396 (10%)

Query: 15  RGFIHQISNPRELD---------ILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           RG +     P ++D         ++ +   +   +G D T S +H GH   +  L   Q 
Sbjct: 42  RGIVEIFPQPTDVDGENESLEKRLVTTNRPLRIKLGIDPTGSDIHLGHSIPVRKLRAFQD 101

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH  + ++G  T+ IGDP+ + E RR +   ++ +N +         + + T     + 
Sbjct: 102 AGHTAVLIIGDFTARIGDPTGKSEVRRQLTEADVAQNAQTYLDQVRPILDFDTPGRLEVR 161

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
            N+E WL  +    +L E+ S  +V +ML+ E    R K+E  +   EF Y ++Q YD V
Sbjct: 162 YNSE-WLSGLDLGKIL-ELLSTMTVGQMLAKEGFAERYKKENPIFIHEFLYPLMQGYDSV 219

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGA 244
            +    +  +++GG+DQ  NI  G DL         F L  P+L    G  KM K+LS  
Sbjct: 220 AV----EADVELGGTDQKFNIAVGRDLQRHFGQKPQFGLLLPILIGTDGVQKMSKSLSNY 275

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           + L++    P   +Q  + + D  +  + + LT LP+ ++    +       + + ++A 
Sbjct: 276 VGLSEH---PAQKYQKLQGVPDNLLSQYFELLTDLPLEKLPENPR-------DRQMLLAW 325

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSR-GMGLLTLIVKAGFAT 363
           E+    +G    E AA  A +          +P  S+S  EVS   + L +L+   G   
Sbjct: 326 EVVKQYNG----EIAANEAKDAAKSGGKEGTVPEFSLS--EVSEFPVKLASLLNVTGLCK 379

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDST 399
           ST E +R ++   ++++           ++ D D+T
Sbjct: 380 STGEGKRKIQEGGVRLDGD---------RMTDIDTT 406


>gi|163854917|ref|YP_001629215.1| tyrosyl-tRNA synthetase [Bordetella petrii DSM 12804]
 gi|163258645|emb|CAP40944.1| tyrS [Bordetella petrii]
          Length = 409

 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 108/411 (26%), Positives = 190/411 (46%), Gaps = 30/411 (7%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           +L E  F  +++N R   +      +   +G D TA  +H GH   L  +  LQ  GH  
Sbjct: 26  LLVESEFARKLANSRATGV-----PLRIKLGLDPTAPDIHLGHTVVLNKMRQLQDLGHNV 80

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           I L+G  TS+IGDPS R+ +R  +  ++I+ N +      S  +     +T+  +  N  
Sbjct: 81  IFLIGDFTSMIGDPSGRNSTRPPLTREQIEANAKTYYAQASLVLD--PARTE--IRYNSE 136

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           W   +    L+ ++ S ++V RM+  E    R K    ++  EF Y ++Q YD V L  +
Sbjct: 137 WSDPLGARGLI-QLASRYTVARMMEREDFTKRFKGGVPIAVHEFLYPLMQGYDSVALKSD 195

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNK 249
               L++GG+DQ  N++ G +L +         LT PLL    G  KM K+    I +++
Sbjct: 196 ----LELGGTDQKFNLLVGRELQKEYGQAPQCVLTMPLLEGTDGVEKMSKSKGNYIGISE 251

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM-AKLQ-GKEINEAKKIIATEIT 307
              SP + +    +I D  +  + + L+   + +I  + A ++ G    +AK  +A EI 
Sbjct: 252 ---SPDSMFGKLMSISDTLMWRYFELLSFRSLEDIAALKAGIEAGANPRDAKVALAQEIV 308

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
              H  + AE A  A    F        MP I+I+       +G+L ++ +AG   S  E
Sbjct: 309 ARFHSAQAAEAALAAFQARFRDGAMPDDMPEINIA----GAPLGILKVLREAGLVASGAE 364

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLCG 418
           A+R+++   ++++   I ++ LQ++       G   +  GK+     +L G
Sbjct: 365 AQRNVEQGGVRVDGDRIEDKSLQLQ------AGTYVVQVGKRKFARVNLAG 409


>gi|320331997|gb|EFW87933.1| tyrosyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str.
           race 4]
 gi|330882166|gb|EGH16315.1| tyrosyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str.
           race 4]
          Length = 403

 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 96/347 (27%), Positives = 158/347 (45%), Gaps = 18/347 (5%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   +  L   Q  GH+ I L+G  T +IGDPS +  +R  +  +++ 
Sbjct: 39  GFDPTAPDLHLGHTVLINKLRQFQDLGHQIIFLIGDFTGMIGDPSGKSATRPPLTREQVL 98

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           +  E  K     F      KT+     N TW+  +   D +R + S ++V RML  +   
Sbjct: 99  DYAETYKS--QVFKILDPAKTEVAF--NSTWMDKLSPADFIR-LSSQYTVARMLERDDFD 153

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R K  QS++  EF Y ++Q YD V L  +    +++GG+DQ  N++ G +L        
Sbjct: 154 KRYKSNQSIAIHEFLYPLVQGYDSVALKAD----VELGGTDQKFNLLMGRELQRAYGQEP 209

Query: 221 LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTL 279
              LT PLL    G  KM K+L   + + +   +P   +    +I D+ +  + + L+  
Sbjct: 210 QCILTMPLLEGLDGVKKMSKSLGNYVGIQE---APGIMYSKLVSIPDSLMWRYFELLSFR 266

Query: 280 PMSEIDRMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMP 337
            M EI+ +      G    + K  +A E+    HG E A  A  +A            +P
Sbjct: 267 SMEEINGLKADCEAGANPRDIKIKLAEELVARFHGEEAAANAHRSAGNRMKEGELPDDLP 326

Query: 338 TISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSII 384
            IS++  E    M +  ++ KAG   +   AR  L S  ++I+  ++
Sbjct: 327 EISVAAIE---DMPISAVLNKAGLVKNAAVARDLLASGGVRIDGEVV 370


>gi|170693375|ref|ZP_02884534.1| tyrosyl-tRNA synthetase [Burkholderia graminis C4D1M]
 gi|170141530|gb|EDT09699.1| tyrosyl-tRNA synthetase [Burkholderia graminis C4D1M]
          Length = 417

 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 101/373 (27%), Positives = 182/373 (48%), Gaps = 46/373 (12%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  +  LQ  GH  I L+G  TS+IGDPS R+ +R  +  ++I
Sbjct: 59  LGLDPTAPDIHIGHTVVLNKMRQLQDLGHTVIFLIGDFTSLIGDPSGRNATRPPLTREQI 118

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKY---------IDLLREIGSFFSV 150
           + N    K  F         +  AL+L+ E     I+Y          D + ++ S ++V
Sbjct: 119 ESN---AKTYF---------EQAALVLDREK--TEIRYNSEWSMPLGADGMIKLASRYTV 164

Query: 151 NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGI 210
            R+L  E    R +    +S  EF Y ++Q YD V L    +  L++GG+DQ  N++ G 
Sbjct: 165 ARILEREDFTKRFQSGVPISIHEFLYPLMQGYDSVAL----NADLELGGTDQKFNLLVGR 220

Query: 211 DLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADV 269
           +L ++    +   LT PLL    G  KM K+ +  I ++++   P + +    +I D  +
Sbjct: 221 ELQKQYGQEQQCILTMPLLEGLDGVEKMSKSKNNYIGISEK---PTDMFGKLMSISDTLM 277

Query: 270 VSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMEC 326
             + + L+  PM EI    R A+  G+   + K ++  EI    H   +AE+    A+E 
Sbjct: 278 WRYFELLSFRPMDEIAAFKREAE-AGRNPRDFKVMLGQEIVARFHSPADAER----ALED 332

Query: 327 FDMSIH---SQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSI 383
           F+          +P ++++   ++ G     L+ +A    ST+EA R+++   +KI+ + 
Sbjct: 333 FNHRAKGGVPDDIPAVALAGAPLAIGQ----LLKQANLVPSTSEALRNIEQGGVKIDGAT 388

Query: 384 ISNEKLQIKLQDF 396
           +S++ L+++  ++
Sbjct: 389 VSDKGLKVEAGEY 401


>gi|26987177|ref|NP_742602.1| tyrosyl-tRNA synthetase [Pseudomonas putida KT2440]
 gi|81442300|sp|Q88QQ2|SYY_PSEPK RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|24981812|gb|AAN66066.1|AE016235_5 tyrosyl-tRNA synthetase [Pseudomonas putida KT2440]
          Length = 399

 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 96/350 (27%), Positives = 161/350 (46%), Gaps = 18/350 (5%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   +  L   Q  GH+ I L+G  T +IGDPS +  +R  +  +++ 
Sbjct: 39  GFDPTAPDLHLGHTVLINKLRQFQDLGHQVIFLIGDFTGMIGDPSGKSATRPPLTREQVL 98

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           EN E  K     F      KT+     N TW+  +   D +R + S ++V RML  +   
Sbjct: 99  ENAETYKQ--QVFKILDPAKTEVAF--NSTWMDKLTPADFIR-LASQYTVARMLERDDFD 153

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R    Q ++  EF Y ++Q YD V L  +    +++GG+DQ  N++ G +L        
Sbjct: 154 KRYTTNQPIAIHEFLYPLVQGYDSVALKAD----VELGGTDQKFNLLMGRELQRSYGQEA 209

Query: 221 LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTL 279
              +T PLL    G  KM K+L   + + +   +P   +    +I D  +  + + L+  
Sbjct: 210 QNIVTMPLLEGLDGVKKMSKSLGNYVGIQE---APGVMYSKLVSIPDTLMWRYFELLSFR 266

Query: 280 PMSEID--RMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMP 337
            M EI+  R     G    + K  +A EI    HG E A  A  AA          + +P
Sbjct: 267 SMEEIEQFRADVANGANPRDIKIKLAEEIVARFHGEEAAANAHRAAGNRMKEGELPEDLP 326

Query: 338 TISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNE 387
            I ++  E    + +  ++ +AG   ++ +AR  L S A+K++ +++  +
Sbjct: 327 EIEVAAAE---DLPIAAVLNRAGLVKNSAQARDLLNSGAVKVDGAVVDKD 373


>gi|330963950|gb|EGH64210.1| tyrosyl-tRNA synthetase [Pseudomonas syringae pv. actinidiae str.
           M302091]
          Length = 399

 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 97/347 (27%), Positives = 158/347 (45%), Gaps = 18/347 (5%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   +  L   Q  GH+ I L+G  T +IGDPS +  +R  +  +++ 
Sbjct: 39  GFDPTAPDLHLGHTVLINKLRQFQDLGHQVIFLIGDFTGMIGDPSGKSATRPPLTREQVL 98

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           +  E  K     F      KT+     N TW+  +   D +R + S ++V RML  +   
Sbjct: 99  DYAETYKS--QVFKILDPAKTEVAF--NSTWMDKLSPADFIR-LSSQYTVARMLERDDFD 153

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R K  QS++  EF Y ++Q YD V L  +    +++GG+DQ  N++ G +L        
Sbjct: 154 KRYKSNQSIAIHEFLYPLVQGYDSVALKAD----VELGGTDQKFNLLMGRELQRAYGQEP 209

Query: 221 LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTL 279
              LT PLL    G  KM K+L   + + +   +P   +    +I D+ +  + + L+  
Sbjct: 210 QCILTMPLLEGLDGVKKMSKSLGNYVGIQE---APGIMYGKLVSIPDSLMWRYFELLSFR 266

Query: 280 PMSEID--RMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMP 337
            M EI+  R     G    + K  +A E+    HG E A  A  +A            +P
Sbjct: 267 SMEEINGLRADCEAGANPRDIKIKLAEELVARFHGEEAAATAHRSAGNRMKEGELPDDLP 326

Query: 338 TISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSII 384
            IS++  E    M +  ++ KAG   +   AR  L S  ++I+  ++
Sbjct: 327 EISVAAIE---DMPISAVLNKAGLVKNAAVARDLLASGGVRIDGEVV 370


>gi|330878330|gb|EGH12479.1| tyrosyl-tRNA synthetase [Pseudomonas syringae pv. morsprunorum str.
           M302280PT]
          Length = 403

 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 102/371 (27%), Positives = 166/371 (44%), Gaps = 19/371 (5%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   +  L   Q  GH+ I L+G  T +IGDPS +  +R  +  +++ 
Sbjct: 39  GFDPTAPDLHLGHTVLINKLRQFQDLGHQVIFLIGDFTGMIGDPSGKSATRPPLTREQVL 98

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           +  E  K     F      KT+     N TW+  +   D +R + S ++V RML  +   
Sbjct: 99  DYAETYKS--QVFKILDPAKTEVAF--NSTWMDKLSPADFIR-LSSQYTVARMLERDDFD 153

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R K  QS++  EF Y ++Q YD V L  +    +++GG+DQ  N++ G +L        
Sbjct: 154 KRYKSNQSIAIHEFLYPLVQGYDSVALKAD----VELGGTDQKFNLLMGRELQRAYGQEP 209

Query: 221 LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTL 279
              LT PLL    G  KM K+L   + + +   +P   +    +I D+ +  + + L+  
Sbjct: 210 QCILTMPLLEGLDGVKKMSKSLGNYVGIQE---APGIMYSKLVSIPDSLMWRYFELLSFR 266

Query: 280 PMSEID--RMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMP 337
            M EI   R     G    + K  +A E+    HG E A  A  +A            +P
Sbjct: 267 SMEEISGLRADCEAGANPRDIKIKLAEELVARFHGEEAAATAHRSAGNRMKEGELPDDLP 326

Query: 338 TISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
            IS++  E    M +  ++ KAG   +   AR  L S  ++I+  ++ +    +KL    
Sbjct: 327 EISVAAIE---DMPISAVLNKAGLVKNAAVARDLLASGGVRIDGEVV-DRSFMVKLGATH 382

Query: 398 STGNIKLSFGK 408
                K +FG+
Sbjct: 383 VCQAGKKAFGR 393


>gi|107021760|ref|YP_620087.1| tyrosyl-tRNA synthetase [Burkholderia cenocepacia AU 1054]
 gi|116688706|ref|YP_834329.1| tyrosyl-tRNA synthetase [Burkholderia cenocepacia HI2424]
 gi|105891949|gb|ABF75114.1| tyrosyl-tRNA synthetase [Burkholderia cenocepacia AU 1054]
 gi|116646795|gb|ABK07436.1| tyrosyl-tRNA synthetase [Burkholderia cenocepacia HI2424]
          Length = 413

 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 101/373 (27%), Positives = 183/373 (49%), Gaps = 46/373 (12%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  +  LQ  GH  I L+G  TS+IGDPS R+ +R  +  ++I
Sbjct: 55  LGLDPTAPDIHIGHTVVLNKMRQLQDLGHTVIFLIGDFTSLIGDPSGRNATRPPLTREQI 114

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKY---------IDLLREIGSFFSV 150
           + N    K  F         +  AL+L+ E     I+Y          D + ++ S ++V
Sbjct: 115 ESN---AKTYF---------EQAALVLDREK--TEIRYNSEWSMPLGADGMIKLASRYTV 160

Query: 151 NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGI 210
            R+L  E    R +    +S  EF Y ++Q YD V L    +  L++GG+DQ  N++ G 
Sbjct: 161 ARILEREDFTKRFQGGVPISIHEFLYPLMQGYDSVAL----NADLELGGTDQKFNLLVGR 216

Query: 211 DLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADV 269
           +L ++    +   LT PLL    G  KM K+    + ++++   P + +    +I D  +
Sbjct: 217 ELQKQYGQEQQCILTMPLLEGLDGVEKMSKSKGNYVGISEK---PTDMFGKLMSISDTLM 273

Query: 270 VSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMEC 326
             + + L+   + EI    R A+  G+   + K ++A EI    H + +AE+    A+E 
Sbjct: 274 WRYFELLSFRSLDEIAGFKREAE-GGRNPRDFKVLLAQEIVARFHSQADAER----ALED 328

Query: 327 FDMSIH---SQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSI 383
           F+          +P+++++   ++ G     L+ +AG   ST+EA R++    +KI+ + 
Sbjct: 329 FNHRAKGGVPDDIPSVTLAGAPLAIGQ----LLKQAGLVPSTSEALRNIDQGGVKIDGAT 384

Query: 384 ISNEKLQIKLQDF 396
           +S++ L+++  +F
Sbjct: 385 VSDKGLKVEAGEF 397


>gi|71737953|ref|YP_272986.1| tyrosyl-tRNA synthetase [Pseudomonas syringae pv. phaseolicola
           1448A]
 gi|115305817|sp|Q48NN3|SYY_PSE14 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|71558506|gb|AAZ37717.1| tyrosyl-tRNA synthetase [Pseudomonas syringae pv. phaseolicola
           1448A]
          Length = 403

 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 96/347 (27%), Positives = 158/347 (45%), Gaps = 18/347 (5%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   +  L   Q  GH+ I L+G  T +IGDPS +  +R  +  +++ 
Sbjct: 39  GFDPTAPDLHLGHTVLINKLRQFQDLGHQIIFLIGDFTGMIGDPSGKSATRPPLTREQVL 98

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           +  E  K     F      KT+     N TW+  +   D +R + S ++V RML  +   
Sbjct: 99  DYAETYKS--QVFKILDPAKTEVAF--NSTWMDKLSPADFIR-LSSQYTVARMLERDDFD 153

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R K  QS++  EF Y ++Q YD V L  +    +++GG+DQ  N++ G +L        
Sbjct: 154 KRYKSNQSIAIHEFLYPLVQGYDSVALKAD----VELGGTDQKFNLLMGRELQRAYGQEP 209

Query: 221 LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTL 279
              LT PLL    G  KM K+L   + + +   +P   +    +I D+ +  + + L+  
Sbjct: 210 QCILTMPLLEGLDGVKKMSKSLGNYVGIQE---APGIMYSKLVSIPDSLMWRYFELLSFR 266

Query: 280 PMSEIDRMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMP 337
            M EI+ +      G    + K  +A E+    HG E A  A  +A            +P
Sbjct: 267 SMEEINGLKADCEAGANPRDIKIKLAEELVARFHGEEAAANAHRSAGNRMKEGELPDDLP 326

Query: 338 TISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSII 384
            IS++  E    M +  ++ KAG   +   AR  L S  ++I+  ++
Sbjct: 327 EISVAAIE---DMPISAVLNKAGLVKNAAVARDLLASGGVRIDGEVV 370


>gi|189349410|ref|YP_001945038.1| tyrosyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
 gi|189333432|dbj|BAG42502.1| tyrosyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
          Length = 413

 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 100/365 (27%), Positives = 182/365 (49%), Gaps = 30/365 (8%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  +  LQ  GH  I L+G  TS+IGDPS R+ +R  +  ++I
Sbjct: 55  LGLDPTAPDIHIGHTVVLNKMRQLQDLGHTVIFLIGDFTSLIGDPSGRNATRPPLTREQI 114

Query: 100 QENIEKIKGIF-SSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
           + N    K  F  + +     KT+  +  N  W   +   D + ++ S ++V R+L  E 
Sbjct: 115 EAN---AKTYFEQAALVLDRDKTE--IRYNSEWSMPLG-ADGMIKLASRYTVARILERED 168

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
              R +    +S  EF Y ++Q YD V L    +  L++GG+DQ  N++ G +L ++   
Sbjct: 169 FTKRFQGGVPISIHEFLYPLMQGYDSVAL----NADLELGGTDQKFNLLVGRELQKQYGQ 224

Query: 219 PKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT 277
            +   LT PLL    G  KM K+    + ++++   P + +    +I D  +  + + L+
Sbjct: 225 EQQCILTMPLLEGLDGVEKMSKSKGNYVGISEK---PTDMFGKLMSISDTLMWRYFELLS 281

Query: 278 TLPMSEI---DRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIH-- 332
              M EI    R A+  G+   + K ++A EI    H + +AE+    A+E F+      
Sbjct: 282 FRSMDEIAGFKREAE-GGRNPRDFKVMLAQEIVARFHSQADAER----ALEDFNHRAKGG 336

Query: 333 -SQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
               +P++S++   ++ G     L+ +AG   ST+EA R+++   +KI+ + +S++ L++
Sbjct: 337 VPDDIPSVSLAGAPLAIGQ----LLKQAGLVPSTSEALRNIEQGGVKIDGTTVSDKGLKV 392

Query: 392 KLQDF 396
              ++
Sbjct: 393 DAGEY 397


>gi|126440034|ref|YP_001060382.1| tyrosyl-tRNA synthetase [Burkholderia pseudomallei 668]
 gi|126219527|gb|ABN83033.1| tyrosine--tRNA ligase [Burkholderia pseudomallei 668]
          Length = 413

 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 100/372 (26%), Positives = 181/372 (48%), Gaps = 44/372 (11%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  +  LQ  GH  I L+G  TS+IGDPS R+ +R  +  ++I
Sbjct: 55  LGLDPTAPDIHLGHTVVLNKMRQLQDLGHTVIFLIGDFTSLIGDPSGRNATRPPLTREQI 114

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKY---------IDLLREIGSFFSV 150
           + N         ++ +       AL+L+ E     I+Y          D + ++ S ++V
Sbjct: 115 ESNAR-------TYFEQA-----ALVLDREK--TEIRYNSEWSMPLGADGMIKLASRYTV 160

Query: 151 NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGI 210
            R+L  E    R +    +S  EF Y ++Q YD V L  N D  L++GG+DQ  N++ G 
Sbjct: 161 ARILEREDFTKRFQGGIPISIHEFLYPLMQGYDSVAL--NAD--LELGGTDQKFNLLVGR 216

Query: 211 DLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADV 269
           +L ++    +   LT PLL    G  KM K+    + ++++   P + +    +I D  +
Sbjct: 217 ELQKQYGQEQQCILTMPLLEGLDGVEKMSKSKGNYVGISEK---PTDMFGKLMSISDVLM 273

Query: 270 VSFAKRLTTLPMSEIDRM--AKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECF 327
             + + L+   + EI R       G+   + K ++A EI    H + +AE+    A+E F
Sbjct: 274 WRYFELLSFRSLDEIARFRGEAEGGRNPRDFKVMLAQEIVARFHSQADAER----ALEDF 329

Query: 328 DMSIH---SQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSII 384
           +          +P ++++   ++ G     L+ +AG   ST+EA R+++   +KI+ + +
Sbjct: 330 NHRAKGGVPDDIPAVTLAGAPLAIGQ----LLKQAGLVPSTSEALRNIEQGGVKIDGATV 385

Query: 385 SNEKLQIKLQDF 396
           S++ L++   +F
Sbjct: 386 SDKALKVDAGEF 397


>gi|206561682|ref|YP_002232447.1| tyrosyl-tRNA synthetase [Burkholderia cenocepacia J2315]
 gi|198037724|emb|CAR53667.1| tyrosyl-tRNA synthetase [Burkholderia cenocepacia J2315]
          Length = 413

 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 99/365 (27%), Positives = 183/365 (50%), Gaps = 30/365 (8%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  +  LQ  GH  I L+G  TS+IGDPS R+ +R  +  ++I
Sbjct: 55  LGLDPTAPDIHIGHTVVLNKMRQLQDLGHTVIFLIGDFTSLIGDPSGRNATRPPLTREQI 114

Query: 100 QENIEKIKGIF-SSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
           + N    K  F  + +     KT+  +  N  W   +   D + ++ S ++V R+L  E 
Sbjct: 115 ESN---AKTYFEQAALVLDRDKTE--IRYNSEWSMPLG-ADGMIKLASRYTVARILERED 168

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
              R +    +S  EF Y ++Q YD V L    +  L++GG+DQ  N++ G +L ++   
Sbjct: 169 FTKRFQGGVPISIHEFLYPLMQGYDSVAL----NADLELGGTDQKFNLLVGRELQKQYGQ 224

Query: 219 PKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT 277
            +   LT PLL    G  KM K+    + ++++   P + +    +I D  +  + + L+
Sbjct: 225 EQQCILTMPLLEGLDGVEKMSKSKGNYVGISEK---PTDMFGKLMSISDTLMWRYFELLS 281

Query: 278 TLPMSEI---DRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIH-- 332
              + EI    R A+  G+   + K ++A EI    H + +AE+    A+E F+      
Sbjct: 282 FRSLDEIAGFKREAE-GGRNPRDFKVLLAQEIVARFHSQPDAER----ALEDFNHRAKGG 336

Query: 333 -SQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
               +P+++++   ++ G     L+ +AG   ST+EA R+++   +KI+ + +S++ L++
Sbjct: 337 VPDDIPSVTLAGAPLAIGQ----LLKQAGLVPSTSEALRNIEQGGVKIDGATVSDKGLKV 392

Query: 392 KLQDF 396
           +  +F
Sbjct: 393 EAGEF 397


>gi|221202301|ref|ZP_03575335.1| tyrosyl-tRNA synthetase [Burkholderia multivorans CGD2M]
 gi|221209115|ref|ZP_03582109.1| tyrosyl-tRNA synthetase [Burkholderia multivorans CGD2]
 gi|221171019|gb|EEE03472.1| tyrosyl-tRNA synthetase [Burkholderia multivorans CGD2]
 gi|221177875|gb|EEE10288.1| tyrosyl-tRNA synthetase [Burkholderia multivorans CGD2M]
          Length = 454

 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 102/365 (27%), Positives = 183/365 (50%), Gaps = 30/365 (8%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  +  LQ  GH  I L+G  TS+IGDPS R+ +R  +  ++I
Sbjct: 96  LGLDPTAPDIHIGHTVVLNKMRQLQDLGHTVIFLIGDFTSLIGDPSGRNATRPPLTREQI 155

Query: 100 QENIEKIKGIF-SSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
           + N    K  F  + +     KT+  +  N  W   +   D + ++ S ++V R+L  E 
Sbjct: 156 EAN---AKTYFEQAALVLDRDKTE--IRYNSEWSMPLG-ADGMIKLASRYTVARILERED 209

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
              R +    +S  EF Y ++Q YD V L  N D  L++GG+DQ  N++ G +L ++   
Sbjct: 210 FTKRFQGGVPISIHEFLYPLMQGYDSVAL--NAD--LELGGTDQKFNLLVGRELQKQYGQ 265

Query: 219 PKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT 277
            +   LT PLL    G  KM K+    + ++++   P + +    +I D  +  + + L+
Sbjct: 266 EQQCILTMPLLEGLDGVEKMSKSKGNYVGISEK---PTDMFGKLMSISDTLMWRYFELLS 322

Query: 278 TLPMSEI---DRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIH-- 332
              M EI    R A+  G+   + K ++A EI    H + +AE+    A+E F+      
Sbjct: 323 FRSMDEIAGFKREAE-GGRNPRDFKVMLAQEIVARFHSQADAER----ALEDFNHRAKGG 377

Query: 333 -SQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
               +P++S++   ++ G     L+ +AG   ST+EA R+++   +KI+ + +S++ L++
Sbjct: 378 VPDDIPSVSLAGAPLAIGQ----LLKQAGLVPSTSEALRNIEQGGVKIDGTTVSDKGLKV 433

Query: 392 KLQDF 396
              ++
Sbjct: 434 DAGEY 438


>gi|239995870|ref|ZP_04716394.1| tyrosyl-tRNA synthetase [Alteromonas macleodii ATCC 27126]
          Length = 399

 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 102/391 (26%), Positives = 187/391 (47%), Gaps = 21/391 (5%)

Query: 7   DFLSILSE--RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           D+ + L+E  RG    +     ++ L S   +T   G+D TA  LH GH   +  L   Q
Sbjct: 3   DWQTALAEIKRGVDEILPEEDLIEKLKSGKTLTIKAGFDPTAPDLHLGHTVLINKLRTFQ 62

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + GHK + L+G  T +IGDP+ ++ +R+ +  +++ EN +  +     F      KT+ +
Sbjct: 63  QLGHKVVFLIGDFTGLIGDPTGKNVTRKPLSKEQVLENAKTYQE--QVFKILDEDKTE-I 119

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
             N+E W+  +    +++ + +  +V RML  +  + R    Q ++  EF Y ++Q +D 
Sbjct: 120 RFNSE-WMDGLGAAGMIK-LAASQTVARMLERDDFKKRYNNGQPIAIHEFLYPLVQGWDS 177

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSG 243
           V L    +  +++GG+DQ  N++ G +L +     +   +  PLL    G  KM K+L+ 
Sbjct: 178 VAL----ESDVELGGTDQRFNLLMGRELQKEQGQKQQSIVMVPLLEGLDGVQKMSKSLNN 233

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKI 301
            I +     +P + +    +I D  +  +   L+  P+ EI  +      G+   + K +
Sbjct: 234 YIGIT---DAPNDMFGKVMSISDDLMWRYYDLLSFRPLEEIAELKTRVANGENPRDIKIM 290

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISIS-KDEVSRGMGLLTLIVKAG 360
           +A EI    H    AE A    ++ F  +     MP + I+  DE   G+ +  L+ +A 
Sbjct: 291 LAKEIIARFHDDAAAEGAHQDFIQRFQKNAIPDDMPELEIALSDE---GIAIGNLLKEAN 347

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQI 391
              ST++A R +K  A+KIN   + + +L I
Sbjct: 348 LVGSTSDAMRMIKQGAVKINGDKVEDTRLVI 378


>gi|161525869|ref|YP_001580881.1| tyrosyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
 gi|221214507|ref|ZP_03587478.1| tyrosyl-tRNA synthetase [Burkholderia multivorans CGD1]
 gi|160343298|gb|ABX16384.1| tyrosyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
 gi|221165764|gb|EED98239.1| tyrosyl-tRNA synthetase [Burkholderia multivorans CGD1]
          Length = 454

 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 102/365 (27%), Positives = 183/365 (50%), Gaps = 30/365 (8%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  +  LQ  GH  I L+G  TS+IGDPS R+ +R  +  ++I
Sbjct: 96  LGLDPTAPDIHIGHTVVLNKMRQLQDLGHTVIFLIGDFTSLIGDPSGRNATRPPLTREQI 155

Query: 100 QENIEKIKGIF-SSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
           + N    K  F  + +     KT+  +  N  W   +   D + ++ S ++V R+L  E 
Sbjct: 156 EAN---AKTYFEQAALVLDRDKTE--IRYNSEWSMPLG-ADGMIKLASRYTVARILERED 209

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
              R +    +S  EF Y ++Q YD V L  N D  L++GG+DQ  N++ G +L ++   
Sbjct: 210 FTKRFQGGVPISIHEFLYPLMQGYDSVAL--NAD--LELGGTDQKFNLLVGRELQKQYGQ 265

Query: 219 PKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT 277
            +   LT PLL    G  KM K+    + ++++   P + +    +I D  +  + + L+
Sbjct: 266 EQQCILTMPLLEGLDGVEKMSKSKGNYVGISEK---PTDMFGKLMSISDTLMWRYFELLS 322

Query: 278 TLPMSEI---DRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIH-- 332
              M EI    R A+  G+   + K ++A EI    H + +AE+    A+E F+      
Sbjct: 323 FRSMDEIAGFKREAE-GGRNPRDFKVMLAQEIVARFHSQADAER----ALEDFNHRAKGG 377

Query: 333 -SQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
               +P++S++   ++ G     L+ +AG   ST+EA R+++   +KI+ + +S++ L++
Sbjct: 378 VPDDIPSVSLAGAPLAIGQ----LLKQAGLVPSTSEALRNIEQGGVKIDGTTVSDKGLKV 433

Query: 392 KLQDF 396
              ++
Sbjct: 434 DAGEY 438


>gi|257483168|ref|ZP_05637209.1| tyrosyl-tRNA synthetase [Pseudomonas syringae pv. tabaci ATCC
           11528]
          Length = 403

 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 96/347 (27%), Positives = 158/347 (45%), Gaps = 18/347 (5%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   +  L   Q  GH+ I L+G  T +IGDPS +  +R  +  +++ 
Sbjct: 39  GFDPTAPDLHLGHTVLINKLRQFQDLGHQIIFLIGDFTGMIGDPSGKSATRPPLTREQVL 98

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           +  E  K     F      KT+     N TW+  +   D +R + S ++V RML  +   
Sbjct: 99  DYAETYKS--QVFKILDPAKTEVAF--NSTWMDRLSPADFIR-LSSQYTVARMLERDDFD 153

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R K  QS++  EF Y ++Q YD V L  +    +++GG+DQ  N++ G +L        
Sbjct: 154 KRYKSNQSIAIHEFLYPLVQGYDSVALKAD----VELGGTDQKFNLLMGRELQRAYGQEP 209

Query: 221 LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTL 279
              LT PLL    G  KM K+L   + + +   +P   +    +I D+ +  + + L+  
Sbjct: 210 QCILTMPLLEGLDGVKKMSKSLGNYVGIQE---APGIMYSKLVSIPDSLMWRYFELLSFR 266

Query: 280 PMSEIDRMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMP 337
            M EI+ +      G    + K  +A E+    HG E A  A  +A            +P
Sbjct: 267 SMEEINGLKADCEAGANPRDIKIKLAEELVARFHGEEAAANAHRSAGNRMKEGELPDDLP 326

Query: 338 TISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSII 384
            IS++  E    M +  ++ KAG   +   AR  L S  ++I+  ++
Sbjct: 327 EISVAAIE---DMPISAVLNKAGLVKNAAVARDLLASGGVRIDGEVV 370


>gi|331001116|ref|ZP_08324747.1| tyrosine--tRNA ligase [Parasutterella excrementihominis YIT 11859]
 gi|329569421|gb|EGG51199.1| tyrosine--tRNA ligase [Parasutterella excrementihominis YIT 11859]
          Length = 414

 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 98/373 (26%), Positives = 173/373 (46%), Gaps = 23/373 (6%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  L   Q  GH  I L+G  TS IGDPS R+ +R  +  ++I
Sbjct: 54  LGLDPTAPDIHLGHTVVLNKLRQFQNLGHTVIFLVGDFTSAIGDPSGRNTTRPPLTREQI 113

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           + N +    +  ++      KT+     N  W   +     ++ + S +++ R+L  +  
Sbjct: 114 EANAKTY--LDQAYKVLDKDKTEVRF--NSEWCNKLGSAGFIK-LASRYTLARLLERDDF 168

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R   +  ++  E  Y ++Q YD V L    +  +++GGSDQ  N++ G +L  +    
Sbjct: 169 AKRFASQAPIAMHELIYPLMQGYDSVAL----EADVELGGSDQRFNLLVGRELQRQYNQE 224

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               +T PLL    G  KM K+    I + +E   P   +    ++ D  + ++   L+ 
Sbjct: 225 AQCIITMPLLVGLDGVNKMSKSKHNYIGITEE---PNEMFGKVMSLSDDLMWNWFDLLSM 281

Query: 279 LPMSEIDRMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM 336
               EI ++ K    G+   +AK ++A EI T  H  E A+ A    +  F      +++
Sbjct: 282 RSNEEIQQLKKECEAGRNPRDAKVMLAKEIVTRFHNAEAADAAEQEFINRFRKGAVPENI 341

Query: 337 PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
           P +++        MG+L LI +AG A ST+EA R++    + +N   ++++ LQ++    
Sbjct: 342 PEVTLENG--GEAMGILKLIKEAGLAPSTSEAGRNVTQGGVHLNGEKVTDKALQVQ---- 395

Query: 397 DSTGNIKLSFGKK 409
              G   L  GK+
Sbjct: 396 --PGTYTLQVGKR 406


>gi|295677652|ref|YP_003606176.1| tyrosyl-tRNA synthetase [Burkholderia sp. CCGE1002]
 gi|295437495|gb|ADG16665.1| tyrosyl-tRNA synthetase [Burkholderia sp. CCGE1002]
          Length = 416

 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 99/365 (27%), Positives = 182/365 (49%), Gaps = 30/365 (8%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  +  LQ  GH  I L+G  TS+IGDPS R+ +R  +  ++I
Sbjct: 58  LGLDPTAPDIHIGHTVVLNKMRQLQDLGHTVIFLIGDFTSLIGDPSGRNATRPPLTREQI 117

Query: 100 QENIEKIKGIF-SSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
           + N    K  F  + +     KT+  +  N  W   +   D + ++ S ++V R+L  E 
Sbjct: 118 ESN---AKTYFEQAALVLDRDKTE--IRYNSEWSMPLG-ADGMIKLASRYTVARILERED 171

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
              R +    +S  EF Y ++Q YD V L    +  L++GG+DQ  N++ G +L ++   
Sbjct: 172 FTKRFQGGVPISIHEFLYPLMQGYDSVAL----NADLELGGTDQKFNLLVGRELQKQYGQ 227

Query: 219 PKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT 277
            +   LT PLL    G  KM K+ +  I ++++   P + +    +I D  +  + + L+
Sbjct: 228 EQQCILTMPLLEGLDGVEKMSKSKNNYIGISEK---PTDMFGKLMSISDTLMWRYFELLS 284

Query: 278 TLPMSEI---DRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIH-- 332
             PM EI    R A+  G+   + K ++  EI    H + +AE+    A+E F+      
Sbjct: 285 FRPMDEIAGFKREAE-AGRNPRDFKVMLGQEIVARFHSQADAER----ALEDFNHRAKGG 339

Query: 333 -SQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
               +P ++++   ++ G     L+ +A    ST+EA R+++   +KI+ + +S++ L++
Sbjct: 340 VPDDIPAVTLAGAPLAIGQ----LLKQANLVPSTSEALRNIEQGGVKIDGTAVSDKGLKV 395

Query: 392 KLQDF 396
           +  ++
Sbjct: 396 EAGEY 400


>gi|116625757|ref|YP_827913.1| tyrosyl-tRNA synthetase [Candidatus Solibacter usitatus Ellin6076]
 gi|116228919|gb|ABJ87628.1| tyrosyl-tRNA synthetase [Candidatus Solibacter usitatus Ellin6076]
          Length = 398

 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 95/347 (27%), Positives = 167/347 (48%), Gaps = 26/347 (7%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   L  +   Q  GH  I L+G  T +IGDP+ R+ +R  M ++ I+
Sbjct: 42  GFDPTAPDLHLGHTVLLRKMKHFQDLGHTVIFLIGDMTGMIGDPTGRNVTRPPMTTEAIE 101

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
            N E  K     F      KT+     N  WL  +++ ++++ + S ++V R+L  +   
Sbjct: 102 RNAETYKQ--QVFKILDPAKTEVRF--NSHWLAPLRWEEVIK-LTSKYTVARLLERDDFA 156

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL-KTP 219
            R      +S  E  Y + Q YD V L    +  ++MGG+DQ  N++ G +L     + P
Sbjct: 157 KRYAANAPISLHELMYPLAQGYDSVAL----ESDVEMGGTDQKFNLLVGRELQRDYGQQP 212

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
           ++ A+  P+L    G  KM K+L   I + +   +P   ++    + D  +  + + LT 
Sbjct: 213 QIVAMV-PILEGLDGVNKMSKSLGNYIGITE---APEVMFRKVMQVSDDLMWRYYELLTD 268

Query: 279 LPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQH--- 335
             ++EI  M +       EAK  +   I    H  E+AE+AA    E F+  +  +    
Sbjct: 269 KSLAEIAAMQR--SMHPMEAKVALGKHIVADFHTAEDAERAA----EVFNAVVRRKEVPS 322

Query: 336 -MPTISISKDEVSR-GMGLLTLIVKAGFATSTNEARRHLKSNAIKIN 380
            +PT+ + +  +++ G+ +  L+ + G   S  +A R +K+ A++IN
Sbjct: 323 DVPTVPMPEGVMTQAGLRVDKLLARIGLVASVTDAVRKIKAGAVEIN 369


>gi|194335972|ref|YP_002017766.1| tyrosyl-tRNA synthetase [Pelodictyon phaeoclathratiforme BU-1]
 gi|194308449|gb|ACF43149.1| tyrosyl-tRNA synthetase [Pelodictyon phaeoclathratiforme BU-1]
          Length = 405

 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 100/356 (28%), Positives = 172/356 (48%), Gaps = 33/356 (9%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D +   LH GH   L  L   Q  GH+ I ++G  T++IGDPS + ++R  + ++E 
Sbjct: 44  LGADPSRPDLHLGHSVVLRKLREFQDFGHEAILIIGDFTAMIGDPSGKSKTRPQLSAEEA 103

Query: 100 QENIEKIKGIFSSFIKYGTGKTDA---LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSF 156
           +EN     G+  S+ +  +   D     +  N  WL  + + D+++ + S ++V RML  
Sbjct: 104 REN-----GL--SYFEQASKILDPEKTTICYNADWLGKMSFADVIK-LSSHYTVARMLER 155

Query: 157 ESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL 216
           +    R + ++ +S  EF Y + Q  D V L  +    +++GG+DQ  N++ G  L    
Sbjct: 156 DDFERRYRAQEPISIHEFLYPLAQGMDSVHLKND----VELGGTDQKFNLLVGRALQREY 211

Query: 217 KTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKR 275
                  +T PLL    G  KM K+L  AI  N    SP + +    +I D  + ++ K 
Sbjct: 212 GIEPQVCITMPLLVGTDGKEKMSKSLGNAICFN---DSPSDIYGKVLSIPDTLIETYCKL 268

Query: 276 LTTLPMSEIDRMAKLQGKEINE----AKKIIATEITTMVHGREEAEKAATAAMECFDMSI 331
           L  +P  +    A L   EI E    AK+ +A  I  +   ++EA+ A +   + F   I
Sbjct: 269 L--VPKEDEGVGAILD--EITENPRTAKRALAKTIAALYSSQKEADDAESQFDQLF---I 321

Query: 332 HSQHMPTISISK-DEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISN 386
           H +    I + + DE S  + L+ L+V  G ATS ++ARR ++  ++ ++   I  
Sbjct: 322 HKKAPDHIELFEFDESS--ISLIDLLVTLGAATSKSDARRMIQQKSVLVDERKIEE 375


>gi|330985735|gb|EGH83838.1| tyrosyl-tRNA synthetase [Pseudomonas syringae pv. lachrymans str.
           M301315]
 gi|331011598|gb|EGH91654.1| tyrosyl-tRNA synthetase [Pseudomonas syringae pv. tabaci ATCC
           11528]
          Length = 398

 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 96/347 (27%), Positives = 158/347 (45%), Gaps = 18/347 (5%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   +  L   Q  GH+ I L+G  T +IGDPS +  +R  +  +++ 
Sbjct: 39  GFDPTAPDLHLGHTVLINKLRQFQDLGHQIIFLIGDFTGMIGDPSGKSATRPPLTREQVL 98

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           +  E  K     F      KT+     N TW+  +   D +R + S ++V RML  +   
Sbjct: 99  DYAETYKS--QVFKILDPAKTEVAF--NSTWMDRLSPADFIR-LSSQYTVARMLERDDFD 153

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R K  QS++  EF Y ++Q YD V L  +    +++GG+DQ  N++ G +L        
Sbjct: 154 KRYKSNQSIAIHEFLYPLVQGYDSVALKAD----VELGGTDQKFNLLMGRELQRAYGQEP 209

Query: 221 LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTL 279
              LT PLL    G  KM K+L   + + +   +P   +    +I D+ +  + + L+  
Sbjct: 210 QCILTMPLLEGLDGVKKMSKSLGNYVGIQE---APGIMYSKLVSIPDSLMWRYFELLSFR 266

Query: 280 PMSEIDRMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMP 337
            M EI+ +      G    + K  +A E+    HG E A  A  +A            +P
Sbjct: 267 SMEEINGLKADCEAGANPRDIKIKLAEELVARFHGEEAAANAHRSAGNRMKEGELPDDLP 326

Query: 338 TISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSII 384
            IS++  E    M +  ++ KAG   +   AR  L S  ++I+  ++
Sbjct: 327 EISVAAIE---DMPISAVLNKAGLVKNAAVARDLLASGGVRIDGEVV 370


>gi|167740156|ref|ZP_02412930.1| tyrosyl-tRNA synthetase [Burkholderia pseudomallei 14]
          Length = 413

 Score =  114 bits (284), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 100/372 (26%), Positives = 179/372 (48%), Gaps = 44/372 (11%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  +  LQ  GH  I L+G  TS+IGDPS R+ +R  +  ++I
Sbjct: 55  LGLDPTAPDIHLGHTVVLNKMRQLQDLGHTVIFLIGDFTSLIGDPSGRNATRPPLTREQI 114

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKY---------IDLLREIGSFFSV 150
           + N    K  F         +  AL+L+ E     I+Y          D + ++ S ++V
Sbjct: 115 ESN---AKTYF---------EQAALVLDREK--TEIRYNSEWSMPLGADGMIKLASRYTV 160

Query: 151 NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGI 210
            RML  E    R +    +   EF Y ++Q YD V L    +  L++GG+DQ  N++ G 
Sbjct: 161 ARMLEREDFTKRFQGGIPILIHEFLYPLMQGYDSVAL----NADLELGGTDQKFNLLVGR 216

Query: 211 DLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADV 269
           +L ++    +   LT PLL    G  KM K+    + ++++   P + +    +I D  +
Sbjct: 217 ELQKQYGQEQQCILTMPLLEGLDGVEKMSKSKGNYVGISEK---PTDMFGKLMSISDVLM 273

Query: 270 VSFAKRLTTLPMSEIDRM--AKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECF 327
             + + L+   + EI R       G+   + K ++A EI    H + +AE+    A+E F
Sbjct: 274 WRYFELLSFRSLDEIARFRGEAEGGRNPRDFKVMLAQEIVARFHSQADAER----ALEDF 329

Query: 328 DMSIH---SQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSII 384
           +          +P ++++   ++ G     L+ +AG   ST+EA R+++   +KI+ + +
Sbjct: 330 NHRAKGGVPDDIPAVTLAGAPLAIGQ----LLKQAGLVPSTSEALRNIEQGGVKIDGATV 385

Query: 385 SNEKLQIKLQDF 396
           S++ L++   +F
Sbjct: 386 SDKALKVDAGEF 397


>gi|94970096|ref|YP_592144.1| tyrosyl-tRNA synthetase [Candidatus Koribacter versatilis Ellin345]
 gi|94552146|gb|ABF42070.1| tyrosyl-tRNA synthetase [Candidatus Koribacter versatilis Ellin345]
          Length = 413

 Score =  114 bits (284), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 103/372 (27%), Positives = 167/372 (44%), Gaps = 46/372 (12%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   +  L   Q  GH  I L+G  TS+IGDP+ R  +R  +  ++I 
Sbjct: 46  GFDPTAPDLHLGHTVLMRKLKHFQDLGHTVIFLIGDFTSLIGDPTGRIATRPPLTREQID 105

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           +N E  K   +   K   G    +  N+E WL  + Y  L+R + + F+V++ML  +   
Sbjct: 106 QNAETYK---AQVFKILDGAKTEVRFNSE-WLGKLDYEKLIR-LTAKFTVSQMLERDDFH 160

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R   E+ ++  EF Y + QAYD V L    +  +++GG+DQ  N++ G +L      P 
Sbjct: 161 KRYTDEKPIAMHEFLYPVAQAYDSVCL----EADVELGGTDQKFNLLMGRELQRHYNQPS 216

Query: 221 LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTL 279
              LT PLL    G  KM K+    I + +   +P   +    +I DA +  + + LT +
Sbjct: 217 QIVLTMPLLEGTDGVQKMSKSYGNYIGITE---APEEMFGKVMSISDALMWRYYELLTDV 273

Query: 280 PMSEIDRM-AKLQGKEINEAK------KIIATEI-------------TTMVHGREEAEKA 319
              EI+ + AK+   E +  K      KII  +              +     +E  ++ 
Sbjct: 274 KTEEIEALKAKVAAGEAHPMKVKQDLGKIIIRDFHNAEAAEHAAENWSKQFQKKEVPDEL 333

Query: 320 ATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKI 379
              A+   D+ +        S+  D V         + KAG A S  +A R +K  A++I
Sbjct: 334 EEVALTAADIGLDG----GTSVRLDRV---------LAKAGLADSMTDAGRKIKVGAVRI 380

Query: 380 NNSIISNEKLQI 391
           ++ + S   L I
Sbjct: 381 DSEVASAPHLTI 392


>gi|172059664|ref|YP_001807316.1| tyrosyl-tRNA synthetase [Burkholderia ambifaria MC40-6]
 gi|171992181|gb|ACB63100.1| tyrosyl-tRNA synthetase [Burkholderia ambifaria MC40-6]
          Length = 413

 Score =  114 bits (284), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 101/373 (27%), Positives = 184/373 (49%), Gaps = 46/373 (12%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  +  LQ  GH  I L+G  TS+IGDPS R+ +R  +  ++I
Sbjct: 55  LGLDPTAPDIHIGHTVVLNKMRQLQDLGHTVIFLIGDFTSLIGDPSGRNATRPPLTREQI 114

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKY---------IDLLREIGSFFSV 150
           + N    K  F         +  AL+L+ E     I+Y          D + ++ S ++V
Sbjct: 115 ESN---AKTYF---------EQAALVLDREK--TEIRYNSEWSMPLGADGMIKLASRYTV 160

Query: 151 NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGI 210
            R+L  E    R +    +S  EF Y ++Q YD V L    +  L++GG+DQ  N++ G 
Sbjct: 161 ARILEREDFTKRFQGGVPISIHEFLYPLMQGYDSVAL----NADLELGGTDQKFNLLVGR 216

Query: 211 DLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADV 269
           +L ++    +   LT PLL    G  KM K+    + ++++   P + +    +I D  +
Sbjct: 217 ELQKQYGQEQQCILTMPLLEGLDGVEKMSKSKGNYVGISEK---PTDMFGKLMSISDTLM 273

Query: 270 VSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMEC 326
             + + L+   + EI    R A+  G+   + K ++A EI    H + +AE+    A+E 
Sbjct: 274 WRYFELLSFRGLDEIAGFKRDAE-GGRNPRDFKVLLAQEIVARFHSQADAER----ALED 328

Query: 327 FDMSIH---SQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSI 383
           F+          +P+++++   ++ G     L+ +AG   ST+EA R+++   +KI+ + 
Sbjct: 329 FNHRAKGGVPDDIPSVTLAGAPLAIGQ----LLKQAGLVPSTSEALRNIEQGGVKIDGAT 384

Query: 384 ISNEKLQIKLQDF 396
           +S++ L+++  +F
Sbjct: 385 VSDKGLKVEAGEF 397


>gi|312797270|ref|YP_004030192.1| Tyrosyl-tRNA synthetase [Burkholderia rhizoxinica HKI 454]
 gi|312169045|emb|CBW76048.1| Tyrosyl-tRNA synthetase (EC 6.1.1.1) [Burkholderia rhizoxinica HKI
           454]
          Length = 420

 Score =  114 bits (284), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 102/367 (27%), Positives = 182/367 (49%), Gaps = 44/367 (11%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  +  LQ  GH  I L+G  TS+IGDPS R+++R  +  ++I
Sbjct: 62  LGLDPTAPDIHIGHTVVLNKMRQLQDLGHTVIFLIGDFTSLIGDPSGRNQTRPPLTREQI 121

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKY---------IDLLREIGSFFSV 150
           + N    K  F         +  AL+L+ E     I+Y          D + ++ S ++V
Sbjct: 122 EAN---AKTYF---------EQAALVLDREK--TEIRYNSEWSMPLGADGMIKLASRYTV 167

Query: 151 NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGI 210
            RML  +    R +    +S  EF Y ++Q YD V L  +    L++GG+DQ  N++ G 
Sbjct: 168 ARMLERDDFTKRFQGGVPISIHEFLYPLMQGYDSVALQSD----LELGGTDQKFNLLVGR 223

Query: 211 DLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADV 269
           +L ++        LT PLL    G  KM K+ +  + ++++   P + +    +I D  +
Sbjct: 224 ELQKQYGQEPQCILTMPLLEGLDGVDKMSKSKNNYVGISEK---PSDMFGKLMSISDTLM 280

Query: 270 VSFAKRLTTLPMSEI-DRMAKLQ-GKEINEAKKIIATEITTMVHGREEAEKAATAAMECF 327
             + + L+   + EI D   ++Q G+   E K ++A EI    H + +A++    A+E F
Sbjct: 281 WRYFELLSFRSLEEIADFKRQVQAGRNPRELKVLLAQEIVARFHSQADAQR----ALEDF 336

Query: 328 DMSIH---SQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSII 384
           +          +P I++S   +  G     L+ +AG   ST+EA R+++ + +KI+ + I
Sbjct: 337 NHRARGGVPDDIPEIALSGAPLPIGQ----LLKQAGLVPSTSEAWRNIEQSGVKIDGTTI 392

Query: 385 SNEKLQI 391
           +++ L++
Sbjct: 393 TDKGLKL 399


>gi|25145805|ref|NP_741383.1| tYrosinyl tRNA Synthetase family member (yrs-1) [Caenorhabditis
           elegans]
 gi|22532881|gb|AAM98001.1| C. elegans YARS-1 protein, isoform b, confirmed by transcript
           evidence [Caenorhabditis elegans]
          Length = 327

 Score =  114 bits (284), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 70/227 (30%), Positives = 120/227 (52%), Gaps = 11/227 (4%)

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           +++NN  WL  I   D LRE  +   V +ML   ++++RL  E  LS+ EF+Y  +QA+D
Sbjct: 26  IIVNNNDWLGKISLRDFLRECKNM-QVGKMLRMNTIKNRL--EVGLSYTEFSYQTMQAFD 82

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFA-LTSPLLTTASGTKMGKTL- 241
           +  L++ Y CR Q+GG DQ G++  G    +++      A +  P+LT ++G K+GK+  
Sbjct: 83  WYTLSEKYGCRFQLGGYDQLGHLDFGAHYIKKMMNQAFAAGVCFPILTDSTGAKLGKSEG 142

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AK 299
            GA+WL+   TSP++F+Q++  + D          +   +  I  + K     + +  A+
Sbjct: 143 GGALWLDATKTSPFHFYQFFAQLHDDKAEELLLLFSLQDIEHIRDVLKNHRSNLGQWIAQ 202

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV 346
           + +A EIT +VHG+E  E     AM C      ++      +S+ EV
Sbjct: 203 RELAAEITRIVHGKEGLE----VAMRCTKAMFGAKKADLSGLSRSEV 245


>gi|332708551|ref|ZP_08428525.1| tyrosyl-tRNA synthetase [Lyngbya majuscula 3L]
 gi|332352648|gb|EGJ32214.1| tyrosyl-tRNA synthetase [Lyngbya majuscula 3L]
          Length = 410

 Score =  114 bits (284), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 98/376 (26%), Positives = 168/376 (44%), Gaps = 29/376 (7%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D T + LH GH   +  L   Q  GH  + ++G  T+ IGDP+ + E RR +   ++
Sbjct: 51  LGIDPTGADLHLGHSIPVRKLRAFQDAGHTAVLIIGDFTARIGDPTGKSEVRRQLTPAQV 110

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           +EN E         + + T     +  N+E WL  +   +++ E+ +  +V +ML+ E  
Sbjct: 111 KENAETYLSQVRPILDFDTPGRLEIRYNSE-WLNQLDLSEII-ELLATMTVGQMLAKEGF 168

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R +++  +   EF Y ++Q YD V +  +    +++GG+DQ  NI  G DL       
Sbjct: 169 AERYQQQNPIFLHEFLYPLMQGYDSVAVKAD----VELGGTDQKFNIALGRDLQRHFGQS 224

Query: 220 KLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
             F L  P+L    G  KM K+L   + L+ +   P   +       D  +  + + LT 
Sbjct: 225 PQFGLLLPILIGTDGIQKMSKSLGNYVGLSDD---PLTMYSKLEGTPDHLLTQYFELLTD 281

Query: 279 LPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSI--HSQHM 336
           +P+ ++    +       E +K +A  I T  HG   A++A  AA+     S       +
Sbjct: 282 VPLDQLPEQPR-------EQQKQLALTIVTQYHGEAAAKEAQQAALNLVKGSTTGTGDSV 334

Query: 337 PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
           P  S+S   V     L  ++ ++G   S+ E RR ++   +K++   IS        Q F
Sbjct: 335 PEFSLSS--VDFPAKLFYILKESGLCQSSGEGRRQIQGGGVKLDGDRISAVD-----QTF 387

Query: 397 DSTGNI---KLSFGKK 409
           DS   +    L  GKK
Sbjct: 388 DSPDQLVGKVLQVGKK 403


>gi|31789364|gb|AAP58481.1| putative tyrosyl-tRNA synthetase [uncultured Acidobacteria
           bacterium]
          Length = 402

 Score =  114 bits (284), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 95/359 (26%), Positives = 171/359 (47%), Gaps = 44/359 (12%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G+D TA  LH GH+  +  +   Q  GH  I ++G  T++IGDP+ R ++R  +  +EI
Sbjct: 41  VGFDPTAPDLHLGHVVLIRKMKHFQDLGHTVIYVVGAFTALIGDPTGRSKTRPPLTQEEI 100

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
            +N E  K   +   K    +   +  N+E WL  +     ++ + + ++V +M+     
Sbjct: 101 AQNAETYK---TQIFKILDREKTVVRFNSE-WLEPLGSFGWVK-LAARYNVAQMMERREF 155

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
           ++R +  + ++  EF Y + QAYD V L  +    +++GG+DQ  N+  G D+       
Sbjct: 156 KARYESGKPIAVHEFLYPLAQAYDSVFLHAD----VELGGTDQLWNLNVGRDIMPSFGLE 211

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYN---------FWQYWRNIDD--- 266
               +T+PLL    GT KM K+L   I + +E +  +           W+Y+  + D   
Sbjct: 212 PQIVMTTPLLEGLDGTEKMSKSLGNYIGVTEEASEMFGKLMSISDDLMWRYYLLLTDLTP 271

Query: 267 ADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMEC 326
           A+V+    R+ +           L  K   +AK  +AT I T  HG E A +AA    + 
Sbjct: 272 AEVLGVRTRVES---------GTLHPK---QAKVDLATRIVTDFHGGETAARAA----DQ 315

Query: 327 FDMSIHSQHMP----TISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINN 381
           F+     + +P    TI +  ++ +    L   +V+ G A ST++ARR ++   ++I+ 
Sbjct: 316 FERRFTKKELPVDAATIELGDEDWN--ASLEKRLVRCGLAESTSDARRKIQQGGVRIDG 372


>gi|167586143|ref|ZP_02378531.1| tyrosyl-tRNA synthetase [Burkholderia ubonensis Bu]
          Length = 413

 Score =  114 bits (284), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 99/364 (27%), Positives = 181/364 (49%), Gaps = 28/364 (7%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  +  LQ  GH  I L+G  TS+IGDPS R+ +R  +  ++I
Sbjct: 55  LGLDPTAPDIHIGHTVVLNKMRQLQDLGHTVIFLIGDFTSLIGDPSGRNATRPPLTREQI 114

Query: 100 QENIEKIKGIF-SSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
           + N    K  F  + +     KT+  +  N  W   +   D + ++ S ++V R+L  E 
Sbjct: 115 EAN---AKTYFEQAALVLDRDKTE--IRYNSEWSMPLG-ADGMIKLASRYTVARILERED 168

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
              R +    +S  EF Y ++Q YD V L    +  L++GG+DQ  N++ G +L ++   
Sbjct: 169 FTKRFQSGVPISIHEFLYPLMQGYDSVAL----NADLELGGTDQKFNLLVGRELQKQYGQ 224

Query: 219 PKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT 277
            +   LT PLL    G  KM K+    + ++++   P + +    +I D  +  + + L+
Sbjct: 225 EQQCILTMPLLEGLDGVEKMSKSKGNYVGISEK---PNDMFGKLMSISDTLMWRYFELLS 281

Query: 278 TLPMSEID--RMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIH--- 332
              M EI   R     G+   + K ++A EI    H + +AE+    A+E F+       
Sbjct: 282 FRSMDEIVGFRREIETGRNPRDFKVLLAQEIVARFHSQADAER----ALEDFNHRAKGGV 337

Query: 333 SQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
              +P+++++   ++ G     L+ +AG   ST+EA R+++   +KI+ + I+++ L+I+
Sbjct: 338 PDDIPSVTLAGAPLAIGQ----LLKQAGLVPSTSEALRNIEQGGVKIDGTAITDKGLKIE 393

Query: 393 LQDF 396
             ++
Sbjct: 394 AGEY 397


>gi|313496801|gb|ADR58167.1| TyrS [Pseudomonas putida BIRD-1]
          Length = 399

 Score =  114 bits (284), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 96/350 (27%), Positives = 161/350 (46%), Gaps = 18/350 (5%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   +  L   Q  GH+ I L+G  T +IGDPS +  +R  +  +++ 
Sbjct: 39  GFDPTAPDLHLGHTVLINKLRQFQDLGHQVIFLIGDFTGMIGDPSGKSATRPPLTREQVL 98

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           EN E  K     F      KT+     N TW+  +   D +R + S ++V RML  +   
Sbjct: 99  ENAETYKQ--QVFKILDPAKTEVAF--NSTWMDKLTPADFIR-LASQYTVARMLERDDFD 153

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R    Q ++  EF Y ++Q YD V L  +    +++GG+DQ  N++ G +L        
Sbjct: 154 KRYTTNQPIAIHEFLYPLVQGYDSVALKAD----VELGGTDQKFNLLMGRELQRSYGQEA 209

Query: 221 LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTL 279
              +T PLL    G  KM K+L   + + +   +P   +    +I D  +  + + L+  
Sbjct: 210 QNIVTMPLLEGLDGVKKMSKSLGNYVGIQE---APGVMYSKLVSIPDTLMWRYFELLSFR 266

Query: 280 PMSEID--RMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMP 337
            M EI+  R     G    + K  +A EI    HG E A  A  AA          + +P
Sbjct: 267 SMEEIEQFRADVANGANPRDIKIKLAEEIVARFHGEEAAANAHRAAGNRMKEGELPEGLP 326

Query: 338 TISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNE 387
            I ++  E    + +  ++ +AG   ++ +AR  L S A+K++ +++  +
Sbjct: 327 EIEVAAAE---DLPIAAVLNRAGLVKNSAQARDLLNSGAVKVDGAVVDKD 373


>gi|225390125|ref|ZP_03759849.1| hypothetical protein CLOSTASPAR_03875 [Clostridium asparagiforme
           DSM 15981]
 gi|225043817|gb|EEG54063.1| hypothetical protein CLOSTASPAR_03875 [Clostridium asparagiforme
           DSM 15981]
          Length = 413

 Score =  114 bits (284), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 97/374 (25%), Positives = 173/374 (46%), Gaps = 21/374 (5%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D +A  +H GH   L  +  LQ  GHK + ++G  T  IGDP+ + ++R+ +  +E+
Sbjct: 51  LGLDPSAPDIHLGHSVVLRKIRQLQDLGHKAVIIIGDYTGRIGDPTGKSKTRKQLTEEEV 110

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
             N +  +      I     K    +  N  W   + + D+L  + S  +V RML  +  
Sbjct: 111 LINAQTYQNQIFKIID----KNKTEVRYNSEWFEKMNFSDILT-LASKCTVARMLERDDF 165

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R      LS  EF Y ++QAYD V +  +    +++GG+DQ  NI+ G  + +     
Sbjct: 166 HKRYTNHLPLSIHEFFYPLMQAYDSVAIKAD----IELGGTDQTFNILMGRYIQKDYGLE 221

Query: 220 KLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               L  PLL    G  KM K+L   I +++   +P+  ++    I D  ++ +    T 
Sbjct: 222 SQLTLFMPLLEGIDGIEKMSKSLGNYIGIDE---APHTIYEKVMKIPDNMIIKYYNLCTD 278

Query: 279 LPMSEIDRMAKL--QGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM 336
           +   E+  +AK   +G+   + K  +A EIT +  G + A  A    ++ F   +  + +
Sbjct: 279 IHPDEVGEIAKRLEEGENPRDIKMELAYEITKLYCGEDGAAAARRRFIDVFQRDLIPEDI 338

Query: 337 PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
             + I  ++    M +L  +++ G   S +E RR  K   +K N   ++    +IK  + 
Sbjct: 339 EILHIGNEDNLEEM-ILAALLETGKFKSKSEIRRLAKQGGVKWNGDRVA----EIKDINL 393

Query: 397 DSTGNIKLSFGKKN 410
           ++ GNI L  GKK+
Sbjct: 394 NAGGNI-LRIGKKH 406


>gi|260893540|ref|YP_003239637.1| tyrosyl-tRNA synthetase [Ammonifex degensii KC4]
 gi|260865681|gb|ACX52787.1| tyrosyl-tRNA synthetase [Ammonifex degensii KC4]
          Length = 405

 Score =  114 bits (284), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 95/374 (25%), Positives = 173/374 (46%), Gaps = 18/374 (4%)

Query: 25  RELDILCSQGV-VTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGD 83
           R+L+   + GV +   +G D TA  +H GH   L  L   Q+ GH+ I ++G  T+ IGD
Sbjct: 26  RKLERSLATGVPLNVKLGLDPTAPDIHLGHTVVLQKLRHFQELGHRTIIVLGDFTARIGD 85

Query: 84  PSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLRE 143
           P+ + E+R+ +  +E+  N    K     F      KT+ +   N TWL  + + ++++ 
Sbjct: 86  PTGKLETRKQLSEEEVLANARTYKE--QIFKVLDPEKTEIVF--NSTWLAPLTFAEVIK- 140

Query: 144 IGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQW 203
           + + ++V RML  E    R +    +S  EF Y ++Q YD V L  +    +++GG+DQ 
Sbjct: 141 LAAHYTVARMLEREDFSKRFRAGLPISIHEFFYPLMQGYDSVVLRAD----VELGGTDQR 196

Query: 204 GNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWR 262
            N++ G  L E        A+ +P+L    G  KM K+L   + +      P   +    
Sbjct: 197 FNLLMGRTLQEAYGQEPQVAIMTPILEGLDGVQKMSKSLGNYVGVTD---PPEEMYGKLM 253

Query: 263 NIDDADVVSFAKRLTTLP-MSEIDRMAKLQGKEIN--EAKKIIATEITTMVHGREEAEKA 319
           ++ D  +  + + +T +P         +++  E+N  +AK ++A  +    H  E A KA
Sbjct: 254 SLPDELIARYLRLVTDVPEEEIERIEQEMKEGELNPRDAKMLLARTVVKRFHSEEAAAKA 313

Query: 320 ATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTNEARRHLKSNAIK 378
               +  F        +P   +  +    G + L  L+  +G   S +EARR +    ++
Sbjct: 314 EEEFIRVFRHRELPSEIPEFPLPSELREGGPIPLFRLLFLSGLVPSLSEARRLISQGGVR 373

Query: 379 INNSIISNEKLQIK 392
           +N   I++ +  IK
Sbjct: 374 VNEEKITDPQAPIK 387


>gi|34556682|ref|NP_906497.1| tyrosyl-tRNA synthetase [Wolinella succinogenes DSM 1740]
 gi|81833185|sp|Q7MAH6|SYY_WOLSU RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|34482396|emb|CAE09397.1| TYROSYL-TRNA SYNTHETASE [Wolinella succinogenes]
          Length = 406

 Score =  114 bits (284), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 92/351 (26%), Positives = 168/351 (47%), Gaps = 22/351 (6%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   +  +   QK G     L+G  T++IGDP+ + E+R+ +  +++ 
Sbjct: 48  GFDPTAPDLHLGHTVLIQKMATFQKHGAIVTFLIGDYTAMIGDPTGKSETRKPLTREQVL 107

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           +N +  +       K    +   +  N+E WL  +    ++ E+ + FSV RML  +   
Sbjct: 108 QNAQSYQ---DQVFKILDPQKTVIRFNSE-WLEKLGTAGMI-ELTAKFSVARMLERDDFE 162

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R K +  +S +EF Y +LQ YD V L    +  ++ GG+DQ  N++ G  L       K
Sbjct: 163 KRYKSQTPISLVEFIYPLLQGYDSVAL----ESDVEFGGTDQKFNLLMGRHLQRSYGLKK 218

Query: 221 -LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               L  P+L    G  KM K+L   I + +E   P   +    ++ D  +  + + L+ 
Sbjct: 219 EQSVLMVPILEGLDGVQKMSKSLGNYIGVTEE---PNTMYAKVLSVSDELMWRYYELLSA 275

Query: 279 LPMSEIDRM---AKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQH 335
             + EI ++    K       +AK+ +A EITT  H  ++A +A     + F        
Sbjct: 276 KSLDEIHKLQEDVKSGNYHPKKAKEDLALEITTRYHSEQDALQAKEEFDKVFARDEIPSE 335

Query: 336 MPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISN 386
           MP + ++ +     + +   +V+ G + ST++ARR +++ ++KIN + + +
Sbjct: 336 MPELGVTGE-----IWICKAMVEGGISPSTSQARRDIQAGSVKINQTKVED 381


>gi|148242904|ref|YP_001228061.1| tyrosyl-tRNA synthetase [Synechococcus sp. RCC307]
 gi|147851214|emb|CAK28708.1| Tyrosyl-tRNA synthetase [Synechococcus sp. RCC307]
          Length = 415

 Score =  114 bits (284), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 99/386 (25%), Positives = 171/386 (44%), Gaps = 41/386 (10%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D T S++H GH      L   Q  GH  + ++G  T+ IGDP+ +  +R  +  +E+
Sbjct: 50  LGIDPTGSNIHLGHSILFRKLRAFQDAGHTAVLIIGDFTARIGDPTGKSATRVQLTVEEV 109

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALM----------LNNETWLCSIKYIDLLREIGSFFS 149
           + N       + + +  G  K  AL+            N  WL  ++   ++  +G+  +
Sbjct: 110 EAN----AATYLAQLGQGQPKEKALLDFETPGRLEVRRNSEWLADLELPQVIGLLGT-AT 164

Query: 150 VNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICG 209
           V +ML+ E    R      ++  EF Y +LQ YD V +    D  +++GG+DQ  N+  G
Sbjct: 165 VGQMLAKEDFAKRYGSGTPIALHEFLYPLLQGYDSVAV----DADVELGGTDQKFNVAMG 220

Query: 210 IDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDAD 268
            DL         F L  P+L    G  KM K+L   + L ++   P + +     + DA 
Sbjct: 221 RDLQRHFNQRTQFGLLLPILVGLDGVQKMSKSLGNTVGLEED---PLSMYSKLEKVGDAA 277

Query: 269 VVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAAT-AAMECF 327
           +  +   LT L ++ + +  +       + +K +A  +T   HG E A KA + AA    
Sbjct: 278 IDDYITLLTDLDLASLPQNPR-------DKQKAMALAVTASRHGLEAASKAQSDAATLVG 330

Query: 328 DMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNE 387
            +   +  +P  S++  +V+       L+   G   S++EARR +K  A ++       E
Sbjct: 331 GVGDAAADVPEASLA--QVNFPAKAFYLLSAVGICASSSEARRQIKGGAARLE-----GE 383

Query: 388 KLQIKLQDFDSTGNIK---LSFGKKN 410
           KL    Q+F S   ++   L  GKK 
Sbjct: 384 KLTDPNQEFASAAELEGKVLQLGKKT 409


>gi|91794161|ref|YP_563812.1| tyrosyl-tRNA synthetase [Shewanella denitrificans OS217]
 gi|91716163|gb|ABE56089.1| tyrosyl-tRNA synthetase [Shewanella denitrificans OS217]
          Length = 398

 Score =  114 bits (284), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 98/375 (26%), Positives = 172/375 (45%), Gaps = 25/375 (6%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  +   Q+ GH+ I L+G  T ++GDPS ++ +R  +  +++
Sbjct: 38  LGADPTAPDIHLGHTVILNKMRTFQELGHEVIFLIGDFTGMVGDPSGKNSTRPPLTREQV 97

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
             N E  K      +     + +     N +WL  +    ++R + S  +V RM+  +  
Sbjct: 98  LANAETYKEQVYKILDPAKTRIEF----NSSWLEPLGAAGMIR-LASQQTVARMMERDDF 152

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
           + R    QS++  EF Y +LQ YD V L  +    +++GG+DQ  N++ G +L +     
Sbjct: 153 KKRYASGQSIAIHEFMYPLLQGYDSVALKAD----VELGGTDQKFNLLMGRELQKAEGQK 208

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYN-FWQYWRNIDDADVVSFAKRLT 277
               +  PLL    G  KM K+    I +    + P N  +    +I D  +  + + L+
Sbjct: 209 PQTVIMMPLLEGLDGVKKMSKSAHNYIGV----SEPANEMFGKIMSISDDLMWRYYELLS 264

Query: 278 TLPMSEIDRMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQH 335
             P++EI++       G    + K  +A EI    H   +A+ A  A ++ F        
Sbjct: 265 FRPLAEIEQFKADVANGTNPRDVKIALAKEIIARFHDEAQAQSAHQAFIDRFQKGAIPDD 324

Query: 336 MPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           +  I++   E   G+G+  L+  AG  +ST+EA R +K  A+K++      EKL+   Q 
Sbjct: 325 IEEITL---EAGEGLGVANLLKDAGLVSSTSEAMRMIKQGAVKMD-----GEKLEDSRQT 376

Query: 396 FDSTGNIKLSFGKKN 410
           F +        GK+ 
Sbjct: 377 FAAGLEAVFQVGKRK 391


>gi|134093531|ref|YP_001098606.1| tyrosyl-tRNA synthetase [Herminiimonas arsenicoxydans]
 gi|133737434|emb|CAL60477.1| Tyrosyl-tRNA synthetase (Tyrosine--tRNA ligase) (TyrRS)
           [Herminiimonas arsenicoxydans]
          Length = 413

 Score =  113 bits (283), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 104/375 (27%), Positives = 179/375 (47%), Gaps = 30/375 (8%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  LH GH   L  +  LQ  GH+ I L+G  TS+IGDPS R+ +R  +  ++I
Sbjct: 56  LGLDPTAPDLHLGHTVVLNKMRQLQDLGHQVIFLIGDFTSMIGDPSGRNITRPPLTKEQI 115

Query: 100 QENIEKIKGIFS-SFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
            EN    K  FS + +     +T+  +  N  W C       + E+ + ++V R+L  E 
Sbjct: 116 SEN---AKTYFSQASLVLDPARTE--IRYNSEW-CDPLGARGMIELSAKYTVARILERED 169

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
              R +    +S  EF Y ++Q YD V L  +    L++GG+DQ  N++ G +L +    
Sbjct: 170 FTKRFQSNTPISLHEFLYPLMQGYDSVALKSD----LELGGTDQKFNLLVGRELQKSYGQ 225

Query: 219 PKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYN-FWQYWRNIDDADVVSFAKRL 276
            +   LT PLL    G  KM K+    I +    T P N  +    +I D  +  + + L
Sbjct: 226 EQQCILTMPLLEGLDGVEKMSKSKGNYIGI----TEPGNTMFAKLMSISDVMMWRYYELL 281

Query: 277 TTLPMSEIDRMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQ 334
           +   ++EI +  K    G+   + K ++A EI    H  + AE A    +      I   
Sbjct: 282 SFRSLAEITQFRKDVEGGRNPRDVKVLLAQEIVARFHSVQAAEDALADFVNRSKGGI-PD 340

Query: 335 HMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
            +P +++S       +G+  L+ +A    ST+EA R ++   ++I+ ++IS++ L+++  
Sbjct: 341 DIPELALS----GAPLGIGQLLKQANLCASTSEALRMVEQGGVRIDGAVISDKALKVE-- 394

Query: 395 DFDSTGNIKLSFGKK 409
                G + +  GK+
Sbjct: 395 ----AGTVVVQVGKR 405


>gi|730884|sp|P41256|SYY_THIFE RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=TyrRZ;
           AltName: Full=Tyrosine--tRNA ligase; Short=TyrRS
 gi|505366|emb|CAA55643.1| tyrosine--tRNA ligase [Acidithiobacillus ferrooxidans]
          Length = 407

 Score =  113 bits (283), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 91/345 (26%), Positives = 158/345 (45%), Gaps = 19/345 (5%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  LH G    L      Q  GH+ + ++G  T++IGDP+ +  +R+ +  +E+
Sbjct: 43  LGMDPTAPDLHLGAYVLLHKARQFQDLGHRLLFVIGDFTAMIGDPTGKSVTRKALSREEV 102

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
             N    +       K    +   +M N+E WL +++  +L+ +I + ++V RML  +  
Sbjct: 103 VANAATYR---PQVFKILDPERTEVMFNSE-WLGALRPEELI-QIAACYTVARMLERDDF 157

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R    Q ++  EF Y +LQ YD V +  +    +++GG+DQ  N++ G +L       
Sbjct: 158 NKRYSANQPIAIHEFLYPLLQGYDSVAIKAD----VELGGTDQRFNLLVGRELQREYGQK 213

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               LT P+L    G  KM K+L   I +      P   +    +I D  +  +   L+ 
Sbjct: 214 PQLVLTMPILEGLDGVQKMSKSLGNFIAVED---PPAEMFGKIMSISDFLMWRYYALLSR 270

Query: 279 LPMSEIDRMAKLQGKEINEAKKI---IATEITTMVHGREEAEKAATAAMECFDMSIHSQH 335
           +P  E  R+ K         + I   +A E+    HG   A++A  A +  F      + 
Sbjct: 271 VPAVEQTRLQKEAASGARNPRDIKLDLAGELVRRFHGTAAAQEAHIAFLARFQRHETPED 330

Query: 336 MPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKIN 380
           +P  +I   E  R   L  L+V+   A ST+EA R +K  A++++
Sbjct: 331 LPLQAIKLSEAPR---LSQLLVQVHLAASTSEAMRKMKEGAVRVD 372


>gi|123969061|ref|YP_001009919.1| tyrosyl-tRNA synthetase [Prochlorococcus marinus str. AS9601]
 gi|123199171|gb|ABM70812.1| Tyrosyl-tRNA synthetase [Prochlorococcus marinus str. AS9601]
          Length = 412

 Score =  113 bits (283), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 100/379 (26%), Positives = 181/379 (47%), Gaps = 28/379 (7%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D T + +H GH      L   Q  GH  + ++G  T+ IGDP+ ++++R  +  +++
Sbjct: 46  LGIDPTGTDIHLGHSILFKKLRAFQDNGHIAVLIIGDFTAQIGDPTGKNKTRVQLSEKQV 105

Query: 100 QENIEKI-------KGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNR 152
           ++N +         K    S + + +     +  N+E WL  +    ++  +GS  +V++
Sbjct: 106 KDNAKTYLTQLGMGKPANESILDFDSKDRIEIRYNSE-WLKGLNLNSIIELMGS-ATVSQ 163

Query: 153 MLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL 212
           ML+ E    R   +  ++  EF Y +LQ YD V +  +    +++GG+DQ  NI  G DL
Sbjct: 164 MLAKEEFNKRYTSQVPIALHEFLYPLLQGYDSVVVQSD----IELGGTDQKFNIAIGRDL 219

Query: 213 GERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVS 271
               K    F +  P+LT   G  KM K+    + L+++   P + +     + D  + +
Sbjct: 220 QRHFKQEPQFGVLLPILTGLDGIKKMSKSEFNTVGLSED---PLSMYSKLEKVPDNIIPT 276

Query: 272 FAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECF-DMS 330
           + + LT     E+D +  L+     E ++ +A E+TT+ HG EEA KA +   + F    
Sbjct: 277 YFELLT-----ELD-LRFLENSNPRELQRRMALEVTTLFHGAEEALKAQSNCEKLFLGQK 330

Query: 331 IHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQ 390
                +P ISI   EV   +    L+       S++E++R +K   +KI++  ++N  L 
Sbjct: 331 EKVGEIPEISIK--EVVFPVKFFYLLSALKLFKSSSESKRSIKGGGVKIDSQKVTNPDLV 388

Query: 391 IKLQDFDSTGNIKLSFGKK 409
              ++ D  G I L  GKK
Sbjct: 389 FNSKN-DLEGKI-LQIGKK 405


>gi|104779737|ref|YP_606235.1| tyrosyl-tRNA synthetase [Pseudomonas entomophila L48]
 gi|95108724|emb|CAK13418.1| tyrosyl-tRNA synthetase [Pseudomonas entomophila L48]
          Length = 399

 Score =  113 bits (283), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 95/350 (27%), Positives = 162/350 (46%), Gaps = 18/350 (5%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   +  L   Q+ GH+ I L+G  T +IGDPS +  +R  +  +++ 
Sbjct: 39  GFDPTAPDLHLGHTVLINKLRQFQELGHQVIFLIGDFTGMIGDPSGKSATRPPLTREQVL 98

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           +N E  K     F      KT+     N TW+  +   D +R + S ++V RML  +   
Sbjct: 99  DNAETYKQ--QVFKILDPAKTEVAF--NSTWMDQLTPADFIR-LASQYTVARMLERDDFD 153

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R    Q ++  EF Y ++Q YD V L  +    +++GG+DQ  N++ G +L        
Sbjct: 154 KRYTSNQPIAIHEFLYPLVQGYDSVALKAD----VELGGTDQKFNLLMGRELQRSYGQEA 209

Query: 221 LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTL 279
              +T PLL    G  KM K+L   + + +   +P   +    +I D  +  + + L+  
Sbjct: 210 QNIVTMPLLEGLDGVKKMSKSLGNYVGIQE---APGVMYSKLVSIPDTLMWRYFELLSFR 266

Query: 280 PMSEID--RMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMP 337
            M EID  R    +G    + K  +A EI    HG E A  A  AA          + +P
Sbjct: 267 SMDEIDQFRADVEKGANPRDIKIKLAEEIVARFHGEEAAANAHRAAGNRMKDGELPEDLP 326

Query: 338 TISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNE 387
            I ++  E    + +  ++ +AG   ++ +AR  L   A+K++ +++  +
Sbjct: 327 EIEVAAAE---DLPIAAVLNRAGLVKNSAQARDLLSGGAVKVDGAVVERD 373


>gi|311070362|ref|YP_003975285.1| tyrosyl-tRNA synthetase [Bacillus atrophaeus 1942]
 gi|310870879|gb|ADP34354.1| tyrosyl-tRNA synthetase [Bacillus atrophaeus 1942]
          Length = 414

 Score =  113 bits (283), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 99/376 (26%), Positives = 172/376 (45%), Gaps = 24/376 (6%)

Query: 20  QISNPRELDILCSQGVVTAY-----IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLM 74
           ++  P EL    ++ V T       +G D +A  +H GH   L  L   Q+TGH    L+
Sbjct: 27  EVIPPEELRTKIAKSVATGMPLKIKLGLDPSAPDVHLGHTVVLNKLRQFQETGHIVQLLI 86

Query: 75  GGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCS 134
           G  T  IGDP+ +  +R+ +  +E+Q N    K  F  F K    K    +  N  WL  
Sbjct: 87  GDFTGKIGDPTGKSTARKQLTDEEVQHN---AKTYFEQFGKV-LDKEKVELHYNSKWLKE 142

Query: 135 IKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCR 194
           +   D++ E+    +V R++  +    R+  ++ +S  EF Y ++Q YD V L    +  
Sbjct: 143 LNLEDVI-ELAGKITVARLMERDDFEERIAMQKPISLHEFFYPLMQGYDSVVL----ESD 197

Query: 195 LQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTS 253
           +++GG+DQ  N++ G    ER K  K   +  PLL    G  KM K+    I +++   +
Sbjct: 198 IELGGTDQHFNVLMGRHFQERYKKEKQVVILMPLLEGLDGVEKMSKSKHNYIGIDE---N 254

Query: 254 PYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK-LQGKEIN--EAKKIIATEITTMV 310
           P + +    ++ D+ +  +    T L + +  R+ K L+   ++  +AK  +   I  M 
Sbjct: 255 PNDMYGKTMSLPDSLMKKYIHLATDLELEDKKRLVKDLETGALHPRDAKMFLGKTIVRMY 314

Query: 311 HGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARR 370
           HG E AE A       F  +   + + T+    D+ +    ++ L+V      S +EARR
Sbjct: 315 HGEEAAEAAEQQFKRVFQQNSLPEDIATVHWKGDQTT---PIIDLLVTLELLPSKSEARR 371

Query: 371 HLKSNAIKINNSIISN 386
            +++  +KIN     N
Sbjct: 372 MIQNGGVKINGEKAEN 387


>gi|320102336|ref|YP_004177927.1| tyrosyl-tRNA synthetase [Isosphaera pallida ATCC 43644]
 gi|319749618|gb|ADV61378.1| tyrosyl-tRNA synthetase [Isosphaera pallida ATCC 43644]
          Length = 424

 Score =  113 bits (283), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 93/356 (26%), Positives = 167/356 (46%), Gaps = 45/356 (12%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G D T  ++H GH   L  L   Q  GH  + ++G  T+++GDPS RDE+R  +   +++
Sbjct: 62  GIDPTGINVHLGHTVPLRKLRQFQDLGHTAVIIIGNSTALVGDPSGRDETRARLTRDQVE 121

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
            N           I      + A + +N  W  +  ++D+L ++    +V++++  +   
Sbjct: 122 ANARDYLAQVGRIIDL----SRAEVHHNGDWFNTWTFLDVL-DLARRVTVSQLIERDDFA 176

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            RLK  +++   E  Y ++Q +D VE+  +    +++GGS+Q  +++   DL +      
Sbjct: 177 KRLKAGKAVFLHECLYPLMQGWDSVEVKAD----VELGGSEQLFSLMLARDLQKEQGLEP 232

Query: 221 LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTL 279
             ALT P+L    GT +MGK+L   I +++   SP N +    +I D  +  +   LT L
Sbjct: 233 QVALTMPILVGTDGTRRMGKSLGNDIGVSE---SPENQFGKLMSIPDEPMRQYFTLLTDL 289

Query: 280 PMSEIDRMAKLQGKEIN--EAKKIIATEITTMVHG-----------REEAEKAATAAMEC 326
           P  E+DR   L G ++N  +AK+++A  I T  HG           R+ AE+        
Sbjct: 290 PADEVDR---LLGPDVNPRDAKEVLARAIVTQYHGAEAAERAATEFRKRAER-------- 338

Query: 327 FDMSIHSQHMPTISISK---DEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKI 379
               I    +P +++ +   D   R M    L+V     +S + ARR ++   + I
Sbjct: 339 ----IDPDEIPQVNLERAALDAEGRMMA-AKLVVALKLESSNSAARRLIEQGGVTI 389


>gi|226354815|ref|YP_002784555.1| tyrosyl-tRNA synthetase [Deinococcus deserti VCD115]
 gi|226316805|gb|ACO44801.1| putative Tyrosyl-tRNA synthetase (Tyrosine-tRNA ligase)
           [Deinococcus deserti VCD115]
          Length = 411

 Score =  113 bits (283), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 99/373 (26%), Positives = 172/373 (46%), Gaps = 19/373 (5%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D T   LH GH   L  +   Q  GHK I L+G  T++IGDPS + ++R  +  QE 
Sbjct: 44  LGADPTRPDLHLGHAVILRKMRQFQDLGHKVIMLIGDFTAMIGDPSGKSKTRPPLTLQET 103

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLN-NETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
           + N +         ++    + + L L  N  WL  + Y D++R + S ++V R+L  + 
Sbjct: 104 RANAQSYLDQCRLILRQ---EPEVLELRFNSEWLEPLGYADIIR-LTSRYTVARILERDD 159

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
              RL     +S  E  Y + Q YD V L  +    +++GG+DQ  N + G  L      
Sbjct: 160 FTKRLNAGTPISMHELLYPLTQGYDSVALHAD----VELGGTDQLFNNLVGRALQRDYDQ 215

Query: 219 PKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT 277
                +T PLL    GT KM K+L   I L  E   P+  +     + D  + ++   LT
Sbjct: 216 EPQVVITLPLLVGLDGTEKMSKSLDNYIGLTDE---PHAMFAGLMKVPDPLLDNYFTLLT 272

Query: 278 TLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMP 337
            LP   I+ +  L G  +  A + +A E+   +H   + + AA    +        Q++P
Sbjct: 273 DLPRERIEEL--LAGHPV-AAHRELAREVVAWLHPGADLD-AAEERFKAVAKGGIPQNIP 328

Query: 338 TISISKDEV-SRG-MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
            +++ + ++ + G + L  L+V AG   S   AR+ +++  +K+N    ++ +  +  + 
Sbjct: 329 QVTVPESDLDAEGRISLARLVVLAGLEPSNGAARKLIQNRGLKLNGETCADPQGYLTREA 388

Query: 396 FDSTGNIKLSFGK 408
             S G + +  GK
Sbjct: 389 LASEGGMVIQKGK 401


>gi|303258283|ref|ZP_07344290.1| tyrosine--tRNA ligase [Burkholderiales bacterium 1_1_47]
 gi|302859036|gb|EFL82120.1| tyrosine--tRNA ligase [Burkholderiales bacterium 1_1_47]
          Length = 414

 Score =  113 bits (282), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 97/373 (26%), Positives = 172/373 (46%), Gaps = 23/373 (6%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  L   Q  GH  I L+G  TS IGDPS R+ +R  +  ++I
Sbjct: 54  LGLDPTAPDIHLGHTVVLNKLRQFQNLGHTVIFLVGDFTSAIGDPSGRNTTRPPLTREQI 113

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           + N +    +  ++      KT+     N  W   +     ++ + S +++ R+L  +  
Sbjct: 114 EANAKTY--LDQAYKVLDKDKTEVRF--NSEWCNKLGSAGFIK-LASRYTLARLLERDDF 168

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R   +  ++  E  Y ++Q YD V L    +  +++GGSDQ  N++ G +L  +    
Sbjct: 169 AKRFASQAPIAMHELIYPLMQGYDSVAL----EADVELGGSDQRFNLLVGRELQRQYNQE 224

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               +T PLL    G  KM K+    I + +E   P   +    ++ D  + ++   L+ 
Sbjct: 225 AQCIITMPLLVGLDGVNKMSKSKHNYIGITEE---PNEMFGKVMSLSDDLMWNWFDLLSM 281

Query: 279 LPMSEIDRMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM 336
               EI ++      G+   +AK ++A EI T  H  E A+ A    +  F      +++
Sbjct: 282 RSNEEIQQLKNECEAGRNPRDAKVMLAKEIVTRFHNAEAADAAEQEFINRFRKGAVPENI 341

Query: 337 PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
           P +++  +     MG+L LI +AG A ST EA R++    + +N   ++++ LQ++    
Sbjct: 342 PEVTLENN--GEAMGILKLIKEAGLAPSTTEAGRNVTQGGVHLNGKKVTDKALQVQ---- 395

Query: 397 DSTGNIKLSFGKK 409
              G   L  GK+
Sbjct: 396 --PGTYTLQVGKR 406


>gi|332975025|gb|EGK11935.1| tyrosine--tRNA ligase [Desmospora sp. 8437]
          Length = 418

 Score =  113 bits (282), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 102/362 (28%), Positives = 177/362 (48%), Gaps = 19/362 (5%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D +A  +H GH   L  L   Q+ GH    ++G  T  IGDPS + E+R+ +   E+
Sbjct: 53  LGLDPSAPDIHIGHTVILNKLRQFQELGHIVQLVIGDFTGRIGDPSGKSETRKQLSEAEV 112

Query: 100 QENIEK-IKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
           + N +   + +F    +  T     +  N+E WL S+ +  ++ E+ +  +V RML  + 
Sbjct: 113 KANAQTYAEQLFKVLDRDKT----EVRFNSE-WLASLDFAAVV-ELAAKTTVARMLERDD 166

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
              R    Q++S  EF Y ++Q YD V L  +    ++ GG+DQ  N++ G  L  +   
Sbjct: 167 FAKRYHSGQAISVHEFFYPLMQGYDSVALQSD----IETGGTDQTFNLLMGRQLQSQYGQ 222

Query: 219 PKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT 277
            +   LT PLL    G  KM K+L   I +++     Y       ++ D  ++ + + +T
Sbjct: 223 EEQVILTMPLLEGLDGVKKMSKSLGNYIGIDEPAQEMYG---KAMSVPDELMLKYFELVT 279

Query: 278 TLPMSEIDRM-AKLQGKEIN--EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQ 334
            L + E+DR+ A L+   I+  +AK ++A  +  M HG+E A +A       F      +
Sbjct: 280 DLTLEELDRLRAGLKEGSIHPRDAKMMLAGRLVQMYHGQEAAAEAEAHFRRVFQQRELPE 339

Query: 335 HMPTISISKDEVSRG-MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL 393
            +P   I   E+  G + ++ L+   G  +S  EARR +K  A+KI+   IS++  +I +
Sbjct: 340 EIPEKEIPDSELEEGKLWIVQLLSSLGLVSSNGEARRMVKQGAVKIDGDKISDQDARITV 399

Query: 394 QD 395
            D
Sbjct: 400 ND 401


>gi|115350631|ref|YP_772470.1| tyrosyl-tRNA synthetase [Burkholderia ambifaria AMMD]
 gi|170699601|ref|ZP_02890640.1| tyrosyl-tRNA synthetase [Burkholderia ambifaria IOP40-10]
 gi|115280619|gb|ABI86136.1| tyrosyl-tRNA synthetase [Burkholderia ambifaria AMMD]
 gi|170135483|gb|EDT03772.1| tyrosyl-tRNA synthetase [Burkholderia ambifaria IOP40-10]
          Length = 413

 Score =  113 bits (282), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 100/373 (26%), Positives = 184/373 (49%), Gaps = 46/373 (12%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  +  LQ  GH  I L+G  TS+IGDPS R+ +R  +  ++I
Sbjct: 55  LGLDPTAPDIHIGHTVVLNKMRQLQDLGHTVIFLIGDFTSLIGDPSGRNATRPPLTREQI 114

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKY---------IDLLREIGSFFSV 150
           + N    K  F         +  AL+L+ E     I+Y          D + ++ S ++V
Sbjct: 115 ESN---AKTYF---------EQAALVLDREK--TEIRYNSEWSMPLGADGMIKLASRYTV 160

Query: 151 NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGI 210
            R+L  E    R +    +S  EF Y ++Q YD V L    +  L++GG+DQ  N++ G 
Sbjct: 161 ARILEREDFTKRFQGGVPISIHEFLYPLMQGYDSVAL----NADLELGGTDQKFNLLVGR 216

Query: 211 DLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADV 269
           +L ++    +   LT PLL    G  KM K+    + ++++   P + +    +I D  +
Sbjct: 217 ELQKQYGQEQQCILTMPLLEGLDGVEKMSKSKGNYVGISEK---PTDMFGKLMSISDTLM 273

Query: 270 VSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMEC 326
             + + L+   + EI    R A+  G+   + K ++A EI    H + +AE+    A++ 
Sbjct: 274 WRYFELLSFRSLDEIAGFKRDAE-GGRNPRDFKVLLAQEIVARFHSQADAER----ALDD 328

Query: 327 FDMSIH---SQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSI 383
           F+          +P+++++   ++ G     L+ +AG   ST+EA R+++   +KI+ + 
Sbjct: 329 FNHRAKGGVPDDIPSVTLAGAPLAIGQ----LLKQAGLVPSTSEALRNIEQGGVKIDGAT 384

Query: 384 ISNEKLQIKLQDF 396
           +S++ L+++  +F
Sbjct: 385 VSDKGLKVEAGEF 397


>gi|113971215|ref|YP_735008.1| tyrosyl-tRNA synthetase [Shewanella sp. MR-4]
 gi|113885899|gb|ABI39951.1| tyrosyl-tRNA synthetase [Shewanella sp. MR-4]
          Length = 408

 Score =  113 bits (282), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 99/397 (24%), Positives = 183/397 (46%), Gaps = 22/397 (5%)

Query: 1   MPAFKSDFLSILSE--RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLM 58
           +PA  +D   +L+E  RG    +     L+ L     +   +G D TA  +H GH   L 
Sbjct: 7   VPAEMADLDQVLAEIRRGTDEILLESDLLEKLKEGRPLRIKLGADPTAPDIHLGHTVILN 66

Query: 59  LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT 118
            L   Q+ GH+ I L+G  T ++GDPS ++ +R  +  +++  N E  K      +    
Sbjct: 67  KLRLFQELGHEVIFLIGDFTGMVGDPSGKNSTRPPLTREQVLANAETYKEQVYKILDPAK 126

Query: 119 GKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMI 178
            + +     N +WL  +    ++R + S  +V RM+  +  + R    QS++  EF Y +
Sbjct: 127 TRIEF----NSSWLEPLGAAGMIR-LASQQTVARMMERDDFKKRYASGQSIAIHEFMYPL 181

Query: 179 LQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KM 237
           LQ YD V L  +    +++GG+DQ  N++ G +L +         +  PLL    G  KM
Sbjct: 182 LQGYDSVALKAD----VELGGTDQKFNLLMGRELQKAEGQKPQAVIMMPLLEGLDGVKKM 237

Query: 238 GKTLSGAIWLNKEMTSPYN-FWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKE 294
            K+    I +    + P N  +    +I D  +  + + L+  P++EI++  +    G  
Sbjct: 238 SKSAHNYIGV----SEPANEMFGKIMSISDELMWRYFELLSFRPLAEIEQFKQDIANGAN 293

Query: 295 INEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLT 354
             + K  +A EI    H +  AE A  A ++ F        +P + ++  E   G+ +  
Sbjct: 294 PRDTKIALAKEIIARFHDQAAAESAHQAFIDRFQKGAIPDDIPEVELAAGE---GLAIAN 350

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
           L+  A    ST++A R +K +A+K++   + + ++ +
Sbjct: 351 LLKDADLVGSTSDAMRMIKQSAVKMDGEKVDDSRMTL 387


>gi|170732003|ref|YP_001763950.1| tyrosyl-tRNA synthetase [Burkholderia cenocepacia MC0-3]
 gi|169815245|gb|ACA89828.1| tyrosyl-tRNA synthetase [Burkholderia cenocepacia MC0-3]
          Length = 413

 Score =  113 bits (282), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 100/373 (26%), Positives = 183/373 (49%), Gaps = 46/373 (12%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  +  LQ  GH  I L+G  TS+IGDPS R+ +R  +  ++I
Sbjct: 55  LGLDPTAPDIHIGHTVVLNKMRQLQDLGHTVIFLIGDFTSLIGDPSGRNATRPPLTREQI 114

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKY---------IDLLREIGSFFSV 150
           + N    K  F         +  AL+L+ E     I+Y          D + ++ S ++V
Sbjct: 115 ESN---AKTYF---------EQAALVLDREK--TEIRYNSEWSMPLGADGMIKLASRYTV 160

Query: 151 NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGI 210
            R+L  E    R +    +S  EF Y ++Q YD V L    +  L++GG+DQ  N++ G 
Sbjct: 161 ARILEREDFTKRFQGGVPISIHEFLYPLMQGYDSVAL----NADLELGGTDQKFNLLVGR 216

Query: 211 DLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADV 269
           +L ++    +   LT PLL    G  KM K+    + ++++   P + +    +I D  +
Sbjct: 217 ELQKQYGQEQQCILTMPLLEGLDGVEKMSKSKGNYVGISEK---PTDMFGKLMSISDTLM 273

Query: 270 VSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMEC 326
             + + L+   + EI    R A+  G+   + K ++A EI    H + +AE+    A++ 
Sbjct: 274 WRYFELLSFRSLDEIAGFKREAE-GGRNPRDFKVLLAQEIVARFHSQPDAER----ALDD 328

Query: 327 FDMSIH---SQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSI 383
           F+          +P+++++   ++ G     L+ +AG   ST+EA R++    +KI+ + 
Sbjct: 329 FNHRAKGGVPDDIPSVTLAGAPLAIGQ----LLKQAGLVPSTSEALRNIDQGGVKIDGAT 384

Query: 384 ISNEKLQIKLQDF 396
           +S++ L+++  +F
Sbjct: 385 VSDKGLKVEAGEF 397


>gi|307546701|ref|YP_003899180.1| tyrosyl-tRNA synthetase [Halomonas elongata DSM 2581]
 gi|307218725|emb|CBV43995.1| tyrosyl-tRNA synthetase [Halomonas elongata DSM 2581]
          Length = 399

 Score =  113 bits (282), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 95/389 (24%), Positives = 173/389 (44%), Gaps = 40/389 (10%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   L  +   Q  GH+ I L+G  T  IGDP+ ++ +R+ +  +E++
Sbjct: 39  GFDPTAPDLHLGHSVLLTKMRQFQDLGHEVIFLIGDFTGRIGDPTGKNVTRKPLTEEEVR 98

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
            N E  K     F      KT+     N  W  S+   D++ E+ +  +V RML  +   
Sbjct: 99  ANAETYKE--QVFKVLDPAKTEVRF--NAEWFSSMSAADMI-ELAAQSTVARMLERDDFE 153

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R +  QS+S  EF Y ++Q YD V L    +  +++GG+DQ  N++ G ++ +      
Sbjct: 154 KRYRAGQSISIHEFLYPLVQGYDSVAL----EADIELGGTDQKFNLLMGREVQKHFDQES 209

Query: 221 LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYN---------FWQYWRNIDDADVV 270
              +T PLL    G  KM K+L   + +++   + +N          W+Y+      D++
Sbjct: 210 QVVITMPLLEGLDGVQKMSKSLGNYVGVDEAPGAMFNKLVSMPDSLMWRYF------DLL 263

Query: 271 SFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFD 328
           S           EID  + +  QG    + K  +A E+    HG E A  A  +A     
Sbjct: 264 SLKSN------EEIDALKHSVEQGANPRDIKMELARELIGRYHGEEAAANAHRSAGNQLA 317

Query: 329 MSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEK 388
                + +P + +  +   R   +  ++ +AG   ++ +A+  L +  +K++  +++ + 
Sbjct: 318 DGELPEDLPEVDVDFEGSDRA-PIAAVLNRAGLVQNSAQAKDMLGNGRVKVDGEVVARDH 376

Query: 389 LQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           +       D+     +  GKK +    L 
Sbjct: 377 M------LDTGKRYVIQAGKKRYARVTLT 399


>gi|255322539|ref|ZP_05363684.1| tyrosyl-tRNA synthetase [Campylobacter showae RM3277]
 gi|255300447|gb|EET79719.1| tyrosyl-tRNA synthetase [Campylobacter showae RM3277]
          Length = 402

 Score =  113 bits (282), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 108/377 (28%), Positives = 175/377 (46%), Gaps = 34/377 (9%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   L  +  LQK G     L+G  T  IGDPS + ++R+ +  + + 
Sbjct: 44  GFDPTAPDLHLGHTVVLQKMALLQKHGAIVQFLIGDFTGQIGDPSGKSQTRKKLDRETVV 103

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
            N +  +       K    +   LM N++ WL  +    ++ E+ S F+V RML  +   
Sbjct: 104 ANAKTYE---EQVFKILDPQKTKLMFNSK-WLNELGAAGIV-ELTSTFAVARMLERDDFE 158

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R K   S+S  EF Y +LQ YD V +     C ++MGG+DQ  N++ G  L       K
Sbjct: 159 KRYKSGASISISEFLYPLLQGYDSVAMK----CDIEMGGTDQKFNLLMGRTLQRVYNVGK 214

Query: 221 LFA-LTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
             A +  PLL    G  KM K+L   I +  E   P + +    ++ D  +  + + L+ 
Sbjct: 215 EQAVIMMPLLEGLDGVNKMSKSLGNYIGVTDE---PNDMFAKVLSVSDELMWRWYELLSE 271

Query: 279 LPMSEIDRM------AKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIH 332
               EI  +       K   K + EA   +A EIT   +G      AA  A   FD  +H
Sbjct: 272 KSTEEIANLKADVASGKAHPKAVKEA---LALEITARYNGE----AAAKEAKAEFD-RVH 323

Query: 333 SQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
           SQ++    + + E+S  + ++  +   G   S+++ARR + +NA+ +N   I++E+L++ 
Sbjct: 324 SQNLIPTEMDEFELSAPVWIVQALTHCGLCASSSQARRDIAANAVSLNQEKIADEQLKL- 382

Query: 393 LQDFDSTGNIKLSFGKK 409
                  G   L  GK+
Sbjct: 383 -----GAGEYVLQVGKR 394


>gi|296046591|gb|ADG86437.1| tyrosine tRNA synthetase [Francisella novicida]
          Length = 399

 Score =  112 bits (281), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 96/358 (26%), Positives = 169/358 (47%), Gaps = 25/358 (6%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   +  L   Q+ GH+ I L+G  T +IGDP+ ++ +R+ +  +++ 
Sbjct: 39  GFDPTAPDLHLGHTVLINKLRQFQQLGHEVIFLIGDFTGMIGDPTGKNVTRKALTKEDVL 98

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
            N E  K     F      KT      N TW+  +    +L ++ S  +V RM+  +  +
Sbjct: 99  ANAETYKE--QVFKILDPAKTTVAF--NSTWMDKLGAAGML-QLASRQTVARMMERDDFK 153

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL----GERL 216
            R    Q+++  EF Y ++Q +D V L    +  +++GG+DQ  N++ G +L    G+R 
Sbjct: 154 KRYANGQAIAIHEFMYPLVQGWDSVAL----EADVELGGTDQKFNLLMGRELQKSEGQRP 209

Query: 217 KTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKR 275
           +T     L  PLL    G  KM K+L   I +     +P + +    +I D  +  + + 
Sbjct: 210 QT----VLMMPLLEGLDGVQKMSKSLGNYIGITD---TPTDMFGKIMSISDVLMWRYYEL 262

Query: 276 LTTLPMSEID--RMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS 333
           L+  P+ EI+  +     GK   + K  +A E+    H    A+ A    +  F      
Sbjct: 263 LSFKPLEEIEGYKTEIENGKNPRDVKIDLAKELIARFHDEAAAQAAHDEFINRFQKGALP 322

Query: 334 QHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
             MP ++I+ +     + +  L+  AG   ST++A R +K  A KI++  +++  L I
Sbjct: 323 DDMPELTITTENGE--IAIANLLKDAGLVGSTSDAFRMIKQGAAKIDSEKVTDRSLVI 378


>gi|71278248|ref|YP_271371.1| tyrosyl-tRNA synthetase [Colwellia psychrerythraea 34H]
 gi|115305802|sp|Q47V01|SYY_COLP3 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|71143988|gb|AAZ24461.1| tyrosyl-tRNA synthetase [Colwellia psychrerythraea 34H]
          Length = 399

 Score =  112 bits (281), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 96/358 (26%), Positives = 169/358 (47%), Gaps = 25/358 (6%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   +  L   Q+ GH+ I L+G  T +IGDP+ ++ +R+ +  +++ 
Sbjct: 39  GFDPTAPDLHLGHTVLINKLRQFQQLGHEVIFLIGDFTGMIGDPTGKNVTRKALTKEDVL 98

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
            N E  K     F      KT      N TW+  +    +L ++ S  +V RM+  +  +
Sbjct: 99  ANAETYKE--QVFKILDPAKTTVAF--NSTWMDKLGAAGML-QLASRQTVARMMERDDFK 153

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL----GERL 216
            R    Q+++  EF Y ++Q +D V L    +  +++GG+DQ  N++ G +L    G+R 
Sbjct: 154 KRYANGQAIAIHEFMYPLVQGWDSVAL----EADVELGGTDQKFNLLMGRELQKSEGQRP 209

Query: 217 KTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKR 275
           +T     L  PLL    G  KM K+L   I +     +P + +    +I D  +  + + 
Sbjct: 210 QT----VLMMPLLEGLDGVQKMSKSLGNYIGITD---TPTDMFGKIMSISDVLMWRYYEL 262

Query: 276 LTTLPMSEID--RMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS 333
           L+  P+ EI+  +     GK   + K  +A E+    H    A+ A    +  F      
Sbjct: 263 LSFKPLEEIEGYKTEIENGKNPRDVKIDLAKELIARFHDEAAAQAAHDEFINRFQKGALP 322

Query: 334 QHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
             MP ++I+ +     + +  L+  AG   ST++A R +K  A KI++  +++  L I
Sbjct: 323 DDMPELTITTENGE--IAIANLLKDAGLVGSTSDAFRMIKQGAAKIDSEKVTDRSLVI 378


>gi|289524533|ref|ZP_06441387.1| tyrosine--tRNA ligase [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
 gi|289502228|gb|EFD23392.1| tyrosine--tRNA ligase [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
          Length = 167

 Score =  112 bits (281), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 62/147 (42%), Positives = 83/147 (56%), Gaps = 2/147 (1%)

Query: 199 GSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFW 258
           G+DQ  NII GIDL  +    K + LT PLL TASG K GKT  G +WL+   T+PY F+
Sbjct: 1   GNDQQVNIIAGIDLIRKKLGAKAYGLTYPLLLTASGQKFGKTEEGTVWLSPVRTTPYKFY 60

Query: 259 QYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINEAKKIIATEITTMVHGREEA 316
           Q+W N DD DV  F K  T LP+ +I  +     +  E  EA+KI+A EIT +VHG   A
Sbjct: 61  QFWINADDRDVEKFLKLFTFLPIDDIKEVMSNHARHPERREAQKILAGEITRVVHGDNAA 120

Query: 317 EKAATAAMECFDMSIHSQHMPTISISK 343
           ++    A    +  I S+ +P   + K
Sbjct: 121 KRVKKLARSYLERPIPSKILPLSCLKK 147


>gi|120553631|ref|YP_957982.1| tyrosyl-tRNA synthetase [Marinobacter aquaeolei VT8]
 gi|120323480|gb|ABM17795.1| tyrosyl-tRNA synthetase [Marinobacter aquaeolei VT8]
          Length = 400

 Score =  112 bits (281), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 90/353 (25%), Positives = 168/353 (47%), Gaps = 18/353 (5%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   +  L   Q  GH+ I L+G  T +IGDP+ +  +R  +   +++
Sbjct: 39  GFDPTAPDLHLGHTVLINKLRQFQDLGHEVIFLIGDFTGMIGDPTGKSATRPPLTEDQVR 98

Query: 101 EN-IEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           +N I   + +F    +  T     ++ N+E W+  +   D++R  G  ++V RML  +  
Sbjct: 99  DNAITYKEQVFKILDREKT----RVVFNSE-WMSKMTAADMIRLAGQ-YTVARMLERDDF 152

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R + EQ ++  EF Y ++Q YD V L    +  +++GG+DQ  N++ G  L +     
Sbjct: 153 TKRYRSEQPIAIHEFLYPLVQGYDSVAL----EADIELGGTDQKFNLLMGRILQKHYGQK 208

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               LT P+L    G  KM K+L   + ++    SP   +    ++ D  +  + + L+ 
Sbjct: 209 PQAILTVPILEGLDGVQKMSKSLGNYVGVS---DSPGEMYTKLLSMPDELLWRYFELLSF 265

Query: 279 LPMSEID--RMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM 336
            PM+EI+  + A   G+   + K+++A E+ T  H  E A+ A  +A     +     ++
Sbjct: 266 RPMAEIEHFKAAVAGGENPQDYKRVLAEELITRFHDEEAAKTAHKSAGNRVALGAIPDNV 325

Query: 337 PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKL 389
           P + +S  E    + +  ++  AG   +   AR  L   A+ ++      +++
Sbjct: 326 PVVEVSL-EGQGEIPMPAVLRLAGLVKNGAAARDVLGRGAVYVDGQQFEGQRM 377


>gi|297537301|ref|YP_003673070.1| tyrosyl-tRNA synthetase [Methylotenera sp. 301]
 gi|297256648|gb|ADI28493.1| tyrosyl-tRNA synthetase [Methylotenera sp. 301]
          Length = 404

 Score =  112 bits (281), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 96/357 (26%), Positives = 171/357 (47%), Gaps = 24/357 (6%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   +  L   Q+ GH+ + L+G  T +IGDP+ +  +R  + ++++Q
Sbjct: 45  GFDPTAPDLHLGHTVLINKLRQFQELGHQVLFLIGDFTGMIGDPTGKSTTRPPLTAEQVQ 104

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           EN +         +K    +T+ +   N  WL  +    +L+ + +  +V RML  +   
Sbjct: 105 ENAKSYTAQVFKILK--PEQTEVVF--NSKWLTELGAAGMLK-LAASHTVARMLERDDFT 159

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R K  Q ++  EF Y +LQ YD V L  +    +++GG+DQ  N++ G +L ++    +
Sbjct: 160 KRYKANQPIAIHEFLYPLLQGYDSVALKAD----VELGGTDQKFNLLMGRELQKQAGMSQ 215

Query: 221 LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTL 279
              LT PLL    G  KM K+L   I + +   +P   +    +I D  +  +   +  L
Sbjct: 216 QCVLTMPLLEGLDGVNKMSKSLGNYIGIAE---APEVIFAKIMSISDDLMWRY---IELL 269

Query: 280 PMSEIDRMAKLQ-----GKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQ 334
               I+ +A+ +     G+     K   A EI    H + +AEK A A  +         
Sbjct: 270 SFETIETIAQWKAQVAAGENPRNIKVGFAQEIVARFHSQADAEK-ALADFQTRAKGGIPD 328

Query: 335 HMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
            +P ISI+ +     +G+  L+  AG   ST+EA R ++   +K+++  +++  LQ+
Sbjct: 329 DVPEISINIE--GENIGIAQLLKLAGLVESTSEAYRAIEQGGVKLDSDKVTDRNLQL 383


>gi|224824111|ref|ZP_03697219.1| tyrosyl-tRNA synthetase [Lutiella nitroferrum 2002]
 gi|224603530|gb|EEG09705.1| tyrosyl-tRNA synthetase [Lutiella nitroferrum 2002]
          Length = 406

 Score =  112 bits (281), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 97/389 (24%), Positives = 178/389 (45%), Gaps = 56/389 (14%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   L  +  LQ  GH+ + L+G  T +IGDPS ++ +R  +  ++IQ
Sbjct: 46  GFDPTAPDLHLGHTVVLTKMRQLQDLGHRIMFLIGDFTGMIGDPSGKNTTRPPLTPEQIQ 105

Query: 101 EN----IEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSF 156
            N     E++  I          KT+     N  WL  +    +LR + +  +V RML  
Sbjct: 106 INAKTYAEQVYKILDP------AKTEICF--NSKWLGELGAAGMLR-LAAGSTVARMLER 156

Query: 157 ESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL 216
           +    R    Q ++  EF Y ++Q YD V +  +    +++GG+DQ  N++ G  L ++ 
Sbjct: 157 DDFHKRFHGNQPIAIHEFMYPLMQGYDSVAMQAD----IELGGTDQKFNLLMGRTLQQQH 212

Query: 217 KTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYN---------FWQYWRNIDD 266
                  +  PLL    G  KM K+L   I + +  +  +           W+Y+     
Sbjct: 213 GQKPQCVIMMPLLEGLDGVNKMSKSLGNYIGIAEPASEIFGKVMSISDTLMWRYY----- 267

Query: 267 ADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAATAAM 324
            ++VSF       P++EI +  +   +G+   + K ++A E+    H    +E+AA  A+
Sbjct: 268 -ELVSFR------PLNEIAQFKQEVAEGRNPRDIKVLLAQELVARFH----SEQAAIDAL 316

Query: 325 ECFDMSIH----SQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKIN 380
             F+           +P ++++ D  +  +G   ++ +A    ST+EA R ++   +K++
Sbjct: 317 ADFEARFQKNAIPDDLPEVTVTLDGAAMAIG--NVLKEAQLVASTSEALRMIQQGGVKVD 374

Query: 381 NSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
              + ++ LQ+     D    + L  GK+
Sbjct: 375 GEKVEDKGLQL-----DRGVTVVLQVGKR 398


>gi|148545721|ref|YP_001265823.1| tyrosyl-tRNA synthetase [Pseudomonas putida F1]
 gi|148509779|gb|ABQ76639.1| tyrosyl-tRNA synthetase [Pseudomonas putida F1]
          Length = 399

 Score =  112 bits (281), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 95/350 (27%), Positives = 160/350 (45%), Gaps = 18/350 (5%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   +  L   Q  GH+ I L+G  T +IGDPS +  +R  +  +++ 
Sbjct: 39  GFDPTAPDLHLGHTVLINKLRQFQDLGHQVIFLIGDFTGMIGDPSGKSATRPPLTREQVL 98

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           EN E  K     F      KT+     N TW+  +   D +R + S ++V RML  +   
Sbjct: 99  ENAETYKQ--QVFKILDPAKTEVAF--NSTWMDKLTPADFIR-LASQYTVARMLERDDFD 153

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R    Q ++  EF Y ++Q YD V L  +    +++GG+DQ  N++ G +L        
Sbjct: 154 KRYTTNQPIAIHEFLYPLVQGYDSVALKAD----VELGGTDQKFNLLMGRELQRSYGQEA 209

Query: 221 LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTL 279
              +T PLL    G  KM K+L   + + +   +P   +    +I D  +  + + L+  
Sbjct: 210 QNIVTMPLLEGLDGVKKMSKSLGNYVGIQE---APGVMYSKLVSIPDTLMWRYFELLSFR 266

Query: 280 PMSEID--RMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMP 337
            M EI+  R     G    + K  +A EI    HG E A  A  AA          + +P
Sbjct: 267 SMEEIEQFRADVANGANPRDIKIKLAEEIVARFHGEEAAANAHRAAGNRMKEGELPEDLP 326

Query: 338 TISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNE 387
            I ++  E    + +  ++ +AG   ++ +AR  L   A+K++ +++  +
Sbjct: 327 EIEVAAAE---DLPIAAVLNRAGLVKNSAQARDLLSGGAVKVDGAVVDKD 373


>gi|253995573|ref|YP_003047637.1| tyrosyl-tRNA synthetase [Methylotenera mobilis JLW8]
 gi|253982252|gb|ACT47110.1| tyrosyl-tRNA synthetase [Methylotenera mobilis JLW8]
          Length = 399

 Score =  112 bits (281), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 99/358 (27%), Positives = 170/358 (47%), Gaps = 26/358 (7%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   +  L   Q+ GHK + L+G  T +IGDP+ +  +R  + ++++Q
Sbjct: 40  GFDPTAPDLHLGHTVLINKLRQFQELGHKVLFLIGDFTGMIGDPTGKSTTRPPLTAEQVQ 99

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           EN +         +K    +T+ +   N  WL  +    +L+ + +  +V RML  +   
Sbjct: 100 ENAKTYTAQVFKILK--PEQTEVVF--NSKWLNELGAAGMLK-LAASHTVARMLERDDFS 154

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R K  Q ++  EF Y +LQ YD V L  N D  L  GG+DQ  N++ G +L ++     
Sbjct: 155 KRFKGNQPIAIHEFLYPLLQGYDSVAL--NADVEL--GGTDQKFNLLMGRELQKQAGQSP 210

Query: 221 LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDD------ADVVSFA 273
              LT PLL    G  KM K+L   I + +   +P   +    +I D       +++SF 
Sbjct: 211 QCVLTMPLLEGLDGVNKMSKSLGNYIGIAE---APEIIFAKIMSISDELMWRYVELLSF- 266

Query: 274 KRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS 333
           + L T+   + D      G    + K   A EI    H + +AEK A A  +        
Sbjct: 267 ESLETIAQWKADVA---NGSNPRDIKVRFAQEIVARFHSQADAEK-ALADFQTRSKGGIP 322

Query: 334 QHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
             +P ++++ D  +  +G+  L+  AG   ST+EA R ++   +K++   ++++ L +
Sbjct: 323 DDVPEVAVTID--AEQVGVAQLLKLAGLVASTSEAFRAIEQGGVKLDGEKVTDKGLML 378


>gi|167031482|ref|YP_001666713.1| tyrosyl-tRNA synthetase [Pseudomonas putida GB-1]
 gi|166857970|gb|ABY96377.1| tyrosyl-tRNA synthetase [Pseudomonas putida GB-1]
          Length = 399

 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 94/350 (26%), Positives = 162/350 (46%), Gaps = 18/350 (5%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   +  L   Q+ GH+ I L+G  T +IGDPS +  +R  +  +++ 
Sbjct: 39  GFDPTAPDLHLGHTVLINKLRQFQELGHQVIFLIGDFTGMIGDPSGKSATRPPLTREQVL 98

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           +N E  K     F      KT+     N TW+  +   D +R + S ++V RML  +   
Sbjct: 99  DNAETYKQ--QVFKILDPAKTEVAF--NSTWMDKLTPADFIR-LASQYTVARMLERDDFD 153

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R    Q ++  EF Y ++Q YD V L  +    +++GG+DQ  N++ G +L        
Sbjct: 154 KRYTTNQPIAIHEFLYPLVQGYDSVALKAD----VELGGTDQKFNLLMGRELQRAYGQEA 209

Query: 221 LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTL 279
              +T PLL    G  KM K+L   + + +   +P   +    +I D  +  + + L+  
Sbjct: 210 QNIVTMPLLEGLDGVKKMSKSLGNYVGIQE---APGVMYGKLVSIPDTLMWRYFELLSFR 266

Query: 280 PMSEID--RMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMP 337
            M EI+  R    +G    + K  +A EI    HG E A  A  AA          + +P
Sbjct: 267 SMEEIEQFRADVAKGANPRDIKIKLAEEIVARFHGEEAAANAHRAAGNRMKEGELPEDLP 326

Query: 338 TISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNE 387
            I ++    S  + +  ++ +AG   ++ +AR  L   A+K++ +++  +
Sbjct: 327 EIEVA---ASEDLPIAAVLNRAGLVKNSAQARDLLNGGAVKVDGAVVDKD 373


>gi|149909291|ref|ZP_01897947.1| tyrosyl-tRNA synthetase [Moritella sp. PE36]
 gi|149807608|gb|EDM67556.1| tyrosyl-tRNA synthetase [Moritella sp. PE36]
          Length = 398

 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 94/354 (26%), Positives = 167/354 (47%), Gaps = 19/354 (5%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D T + LH GH   L  L   Q  GH+ I L+G  T+ +GDPS ++ +R  +  +++
Sbjct: 38  LGADPTGADLHLGHTVILNKLRQFQDLGHEVIFLIGDFTATVGDPSGKNSTRPPLTREDV 97

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
             N +     ++  +     ++   +  N TWL  +    ++R + S  +V RML  +  
Sbjct: 98  LVNAK----TYTDQVFKILDESKTRIEFNSTWLNELGAAGIIR-LASQQTVARMLERDDF 152

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
           + R    Q ++  EF Y +LQ YD V L  +    +++GG+DQ  N++ G +L +     
Sbjct: 153 KKRYASGQGIAIHEFMYPLLQGYDSVALKAD----VELGGTDQKFNLLMGRELQKAEGQK 208

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               +  PLL    G  KM K+ +  I +     +P   +    +I D  + ++ + L+ 
Sbjct: 209 PQTVIMMPLLVGLDGVKKMSKSSNNYIGVTD---APNEMFGKIMSITDELMWNYFELLSF 265

Query: 279 LPMSEIDRM-AKLQGKEIN--EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQH 335
            P++EI++  A +    +N  + K  +A EI    H    AE A     + F  +     
Sbjct: 266 RPLAEIEKFKADIAADAVNPRDVKISLAKEIIARFHDEAAAESAHNDFTQRFSKNSIPDE 325

Query: 336 MPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKL 389
           MP    +   VS  M +  L+ +AG  + T+EA R +K  A+KI++  I + +L
Sbjct: 326 MPEFDFA---VSDAMAIANLLKEAGLVSGTSEAMRMIKQGAVKIDSVKIDDTRL 376


>gi|217076526|ref|YP_002334242.1| tyrosyl-tRNA synthetase [Thermosipho africanus TCF52B]
 gi|217036379|gb|ACJ74901.1| tyrosyl-tRNA synthetase [Thermosipho africanus TCF52B]
          Length = 398

 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 101/396 (25%), Positives = 182/396 (45%), Gaps = 31/396 (7%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
            K + +  +SE   + ++   R L +          +G D +   LH GH   L  L   
Sbjct: 10  LKKNVVDFVSEEELVERLKENRPLRV---------KLGVDPSRPDLHLGHAVVLKKLKQF 60

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q+ GH  I ++G  T+ IGDP+ R+ +R M+  +E+++N E       +F      KT+ 
Sbjct: 61  QELGHHIILIIGDFTARIGDPTGRNSTRPMLSEEEVRKNAETYAN--QAFKILDKEKTE- 117

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           +  NNE WL  +K+ D+++  G  ++V RML  +    RL +   +S  EF Y + QAYD
Sbjct: 118 IRFNNE-WLGKMKFEDVVKLAGK-YTVARMLERDDFAKRLSQGYPISIAEFLYPLAQAYD 175

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLS 242
            V +  +    +++GG+DQ  N++ G  + E         +T P++    G  KM K+  
Sbjct: 176 SVAIQAD----VELGGTDQLFNLLVGRKIQEEYGQKPQIVMTMPIIEGTDGKLKMSKSYD 231

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEIN--EA 298
             I    E   P + +    +I D  +  + + +T +  SEI+    L  +GK IN  + 
Sbjct: 232 NYIAFTDE---PNDMYGKIMSIPDELIAKYMRLITDIEESEIEEYEILMKEGK-INPRDV 287

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVK 358
           K  +A EI    + +E+A  A    ++ F        MP I +   E +    ++ L+ K
Sbjct: 288 KMRLAREIVAFFYDKEKARMAEENFVKVFRQKEIPDEMPEIQVEPGEYN----IVDLVTK 343

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
                S +E +R +    +  +   +++ K  +K++
Sbjct: 344 VNSNYSKSEVKRLISQGGVYFDGKRVNDFKQIVKVE 379


>gi|313111703|ref|ZP_07797496.1| tyrosyl-tRNA synthetase 2 [Pseudomonas aeruginosa 39016]
 gi|310883998|gb|EFQ42592.1| tyrosyl-tRNA synthetase 2 [Pseudomonas aeruginosa 39016]
          Length = 399

 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 99/347 (28%), Positives = 159/347 (45%), Gaps = 18/347 (5%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   +  L   Q  GH+ I L+G  T +IGDPS +  +R  +  +++ 
Sbjct: 39  GFDPTAPDLHLGHTVLINKLRQFQDLGHQVIFLIGDFTGMIGDPSGKSVTRPPLTREQVL 98

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           EN E  K     F      KT+     N TW+  +   D +R + S ++V RML  +   
Sbjct: 99  ENAETYKS--QVFKILDPAKTEVAF--NSTWMDQLTPADFIR-LASQYTVARMLERDDFS 153

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R    Q ++  EF Y ++Q YD V L  +    +++GG+DQ  N++ G +L        
Sbjct: 154 KRYASNQPIAIHEFLYPLVQGYDSVALKAD----VELGGTDQKFNLLMGRELQRAYGQEA 209

Query: 221 LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTL 279
              LT PLL    G  KM K+L   I + +   +P   +    +I D  +  + + L+  
Sbjct: 210 QVILTMPLLEGLDGVKKMSKSLGNYIGIQE---APGVMYSKLVSIPDTLMWRYFELLSFR 266

Query: 280 PMSEIDRMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMP 337
            + EID   K    G    + K  +A EI    HG E A  A  +A          + +P
Sbjct: 267 SLDEIDSFRKDVEAGANPRDIKIKLAEEIVARFHGEEAAASAHKSAGNRLKEGELPEDLP 326

Query: 338 TISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSII 384
            I +S  E    M + +++ KAG A +   AR  L + ++K++  ++
Sbjct: 327 EIELSSPE---DMPVASVLNKAGLAKNAAAARDLLGAGSVKVDGQVV 370


>gi|330505225|ref|YP_004382094.1| tyrosyl-tRNA synthetase [Pseudomonas mendocina NK-01]
 gi|328919511|gb|AEB60342.1| tyrosyl-tRNA synthetase [Pseudomonas mendocina NK-01]
          Length = 399

 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 94/356 (26%), Positives = 159/356 (44%), Gaps = 36/356 (10%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   +  L   Q+ GH+ + L+G  T +IGDPS +  +R  +  +++ 
Sbjct: 39  GFDPTAPDLHLGHTVLINKLRQFQELGHQVVFLIGDFTGMIGDPSGKSATRPPLTREQVL 98

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           +N E  K     F      KT+     N TW+  +K  D +R + S ++V RML  +   
Sbjct: 99  DNAETYKQ--QVFKILDPAKTEVAF--NSTWMDQLKPADFIR-LASQYTVARMLERDDFD 153

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R    Q ++  EF Y ++Q YD V L  +    +++GG+DQ  N++ G +L        
Sbjct: 154 KRYTGNQPIAIHEFLYPLVQGYDSVALKAD----VELGGTDQKFNLLMGRELQRAYGQES 209

Query: 221 LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYN---------FWQYWRNIDDADVV 270
              +T PLL    G  KM K+L   + + +     YN          W+Y+      +++
Sbjct: 210 QCIVTMPLLEGLDGVKKMSKSLGNYVGIQEAPGVMYNKLVSMPDVLMWRYF------ELL 263

Query: 271 SFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFD 328
           SF        M EI++  +   QG    + K  +A E+    HG E A  A  +A     
Sbjct: 264 SFRS------MEEIEQFKRDVEQGANPRDIKIKLAEELVARFHGEEAAASAHRSAGNRMK 317

Query: 329 MSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSII 384
                  +P + +   E    M + +++ KAG   +   AR  L S  ++++  ++
Sbjct: 318 DGELPADLPEVELVSVE---DMPISSVLNKAGLVKNAAVARDLLGSGGVRVDGEVV 370


>gi|53804945|ref|YP_113252.1| tyrosyl-tRNA synthetase [Methylococcus capsulatus str. Bath]
 gi|81682669|sp|Q60AU5|SYY_METCA RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|53758706|gb|AAU92997.1| tyrosyl-tRNA synthetase [Methylococcus capsulatus str. Bath]
          Length = 397

 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 98/366 (26%), Positives = 163/366 (44%), Gaps = 41/366 (11%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   L  L   Q  GH+ I L+G  T +IGDP+ ++ +RR +   E+ 
Sbjct: 36  GFDPTAPDLHLGHTVLLNKLKQFQDLGHETIFLIGDFTGMIGDPTGKNVTRRPLTRDEVI 95

Query: 101 ENIEKI-KGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           EN +   + I+       T     L++ N +W+ ++   DL+ ++ +  +V RML  +  
Sbjct: 96  ENAKTYEEQIYKVLCPERT-----LVMFNSSWMNAMTSADLI-QLAAKHTVARMLERDDF 149

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R    Q +S  EF Y ++Q YD V L  +    +++GG+DQ  N++ G  L E     
Sbjct: 150 AKRYAGGQPISIHEFLYPLIQGYDSVALKAD----VELGGADQKFNLLVGRHLQEIYGQT 205

Query: 220 KLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYN---------FWQYWRNIDDADV 269
               +T P+L    G  KM K+L   I +       +           W+Y+      D+
Sbjct: 206 PQVVMTMPILEGLDGIQKMSKSLGNYIGIADPPDDMFGKIMSISDDLMWRYY------DL 259

Query: 270 VSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECF 327
           +SFA      P++E+ R  +   +G    + K  +  EI    HG   A K    A+E F
Sbjct: 260 LSFA------PLAEVARWRRECSEGANPRDVKVRLGQEIVERFHGASAARK----ALENF 309

Query: 328 DMSIHSQHMPTISISK--DEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIIS 385
           +       +P   + +       G  +  L+       ST+EA R +K   IKI+   + 
Sbjct: 310 EARHRDNAVPDDLVEQVIAVPDGGYPIANLVHDLALTASTSEALRLIKQGGIKIDGERLE 369

Query: 386 NEKLQI 391
           + K ++
Sbjct: 370 DPKCRM 375


>gi|226946610|ref|YP_002801683.1| tyrosyl-tRNA synthetase [Azotobacter vinelandii DJ]
 gi|226721537|gb|ACO80708.1| tyrosyl-tRNA synthetase [Azotobacter vinelandii DJ]
          Length = 399

 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 95/347 (27%), Positives = 156/347 (44%), Gaps = 18/347 (5%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   +  L   Q  GH+ I L+G  T +IGDP+ +  +R  +   ++ 
Sbjct: 39  GFDPTAPDLHLGHTVLINKLRQFQDLGHQVIFLVGDFTGMIGDPTGKSATRPPLTRDQVL 98

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           EN E  K     F      KT+ +   N  W+  +   D +R + S  +V RML  +   
Sbjct: 99  ENAETYKA--QVFKILDPAKTEVVF--NSAWIEQLTPADFVR-LTSHCTVARMLERDDFS 153

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R    QS++  EF Y ++Q YD V L  +    +++GG+DQ  N++ G +L        
Sbjct: 154 KRYAANQSIALHEFLYPLMQGYDSVALRAD----VELGGTDQKFNLLMGRELQRVYGQKS 209

Query: 221 LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTL 279
              +T PLL    G  KM K+L   + + +    P   +    +I D+ +  + + L+  
Sbjct: 210 QCIVTMPLLEGLDGVKKMSKSLGNYVGIQE---PPGVMYGKLVSIPDSLMWRYFELLSFR 266

Query: 280 PMSEID--RMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMP 337
            M EID  R    +G    + K  +A EI T  HG   A  A  +A          + +P
Sbjct: 267 SMEEIDAFRSEVDRGANPRDIKIKLAEEIVTRFHGEVAAANAHRSAGNRMKDGELPESLP 326

Query: 338 TISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSII 384
            I +   E    M +  ++ KAG   +   AR  L S  ++++ +++
Sbjct: 327 EIQLLSTE---DMPIAAVLNKAGLVKNAAAARDLLSSGGVRVDGAVV 370


>gi|308069708|ref|YP_003871313.1| Tyrosyl-tRNA synthetase 2 (Tyrosine--tRNA ligase) (TyrRS 2)
           [Paenibacillus polymyxa E681]
 gi|305858987|gb|ADM70775.1| Tyrosyl-tRNA synthetase 2 (Tyrosine--tRNA ligase) (TyrRS 2)
           [Paenibacillus polymyxa E681]
          Length = 417

 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 87/348 (25%), Positives = 165/348 (47%), Gaps = 17/348 (4%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D +A  +H GH   +  L   Q+ GH+   ++G  T  IGDP+ + E+R+ +  +++
Sbjct: 52  LGLDPSAPDIHIGHTVVMHKLRQFQELGHQVQLIIGDFTGRIGDPTGKSETRKQLTEEDV 111

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           Q N +  K       K    +   +  N+E WL  + + D++  + +  +V RML  +  
Sbjct: 112 QRNAQTYK---EQIFKILDPEKTKVFYNSE-WLGPMSFADVVT-LSAKVTVARMLERDDF 166

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R +    +S  EF Y ++Q  D V L  +    +++GG+DQ  N++ G  L +     
Sbjct: 167 TKRYQNGLPISIHEFFYPLMQGMDSVALQSD----IELGGTDQKFNLLMGRTLQKEYGVE 222

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               +T PLL    G  KM K+L   I +++E   P   +    ++ D  ++ + +  T 
Sbjct: 223 PQATITLPLLEGLDGVQKMSKSLGNYIGVDEE---PNEIYGKSMSVPDELMLKYFELATD 279

Query: 279 LPMSEIDRMAK-LQGKEIN--EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQH 335
           +   E+  +AK ++   ++  +AK  +A  +  M HG E  E A    +  F        
Sbjct: 280 INNEELAELAKGVKDGSVHPRDAKMKLAGTLVRMYHGEEAEEAAKQHFVTVFQQRALPDD 339

Query: 336 MPTISISKDEVSR-GMGLLTLIVKAGFATSTNEARRHLKSNAIKINNS 382
           +   +++ D++   G+ ++ L+   GFA S  EA+R ++  ++KIN  
Sbjct: 340 IEEFTLTADQLEEGGIRVIQLLTHLGFAASNGEAKRSIQQGSVKINEE 387


>gi|254526376|ref|ZP_05138428.1| tyrosyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9202]
 gi|221537800|gb|EEE40253.1| tyrosyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9202]
          Length = 412

 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 101/379 (26%), Positives = 178/379 (46%), Gaps = 28/379 (7%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D T + +H GH      L   Q  GH  + ++G  T+ IGDP+ ++++R  +  +++
Sbjct: 46  LGIDPTGTDIHLGHSILFKKLRAFQDNGHIAVLIIGDFTAQIGDPTGKNKTRVQLSEKQV 105

Query: 100 QENIEKI-------KGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNR 152
           ++N +         K    S + +       +  N+E WL  +    ++  +GS  +V++
Sbjct: 106 KDNAKTYLAQLGMGKPANKSILDFDAKDRIEIRYNSE-WLKGLNLNSIIDLMGS-ATVSQ 163

Query: 153 MLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL 212
           ML+ E    R   +  +S  EF Y +LQ YD V +  +    +++GG+DQ  NI  G DL
Sbjct: 164 MLAKEEFNKRYTAQVPISLHEFLYPLLQGYDSVVVQSD----IELGGTDQKFNIAIGRDL 219

Query: 213 GERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVS 271
               K    F +  P+LT   G  KM K+    + L ++   P + +     + D  + +
Sbjct: 220 QRHFKQDPQFGVLLPILTGLDGVKKMSKSEFNTVGLTED---PLSMYSKLEKVPDNIIPT 276

Query: 272 FAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSI 331
           + + LT L +S       L+     E ++ +A E+TT+ HG EEA KA +   + F    
Sbjct: 277 YFELLTELDLSF------LENSNPRELQRRMAFEVTTLFHGAEEALKAQSNCEKLF--LG 328

Query: 332 HSQHMPTIS-ISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQ 390
           H + +  I  IS  EV   +    L+       S++E++R +K   +KI++  + N  L 
Sbjct: 329 HKEKVGEIPEISLKEVVFPVKFFYLLSALKLFKSSSESKRSIKGGGVKIDSQKVINPDLV 388

Query: 391 IKLQDFDSTGNIKLSFGKK 409
              ++ D  G I L  GKK
Sbjct: 389 FNSKN-DLEGKI-LQIGKK 405


>gi|83648875|ref|YP_437310.1| tyrosyl-tRNA synthetase [Hahella chejuensis KCTC 2396]
 gi|115305807|sp|Q2S8Y9|SYY_HAHCH RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|83636918|gb|ABC32885.1| tyrosyl-tRNA synthetase [Hahella chejuensis KCTC 2396]
          Length = 400

 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 96/380 (25%), Positives = 171/380 (45%), Gaps = 26/380 (6%)

Query: 10  SILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
            I+ E G I ++     L I           G+D TA  LH GH   +  L   Q  GH+
Sbjct: 17  EIIQEEGLIEKLKRGEPLRIKA---------GFDPTAPDLHLGHTVLINKLRQFQDLGHQ 67

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
            I L+G  T +IGDP+ +  +R  +  +++ +N +  K       K    K   +  N+E
Sbjct: 68  VIFLIGDFTGMIGDPTGKSATRPPLTKEDVAQNAQTYK---EQVFKILDPKKTEVRFNSE 124

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
            W+  +   D++R  G  ++V RML  +    R   EQS+S  EF Y ++Q YD V L  
Sbjct: 125 -WMDKLSAADMIRLAGQ-YTVARMLERDDFHKRYHGEQSISIHEFLYPLVQGYDSVALRA 182

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLN 248
           +    +++GG+DQ  N++ G  L +         +T P+L    G  KM K+L   I +N
Sbjct: 183 D----VELGGTDQKFNLLMGRMLQKHYDQEPQVIMTMPILEGLDGVQKMSKSLGNYIGVN 238

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ---GKEINEAKKIIATE 305
                P   +    +I D  +  + + L+   M+EI+   K+Q   G+     K+++A E
Sbjct: 239 ---DLPGEMFGKLLSIPDELMWRYFELLSFRDMAEIEDF-KVQVNAGENPQNIKRLLAEE 294

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           I    HG E A+ A  +A     +    +++P + + + +      +  ++ +A    + 
Sbjct: 295 IVARFHGGEAAQSAHKSAGNQVKLGEIPENVPVVHLEESDDQTEFSISYILRRADLVKNG 354

Query: 366 NEARRHLKSNAIKINNSIIS 385
             A+  L   A+ ++ + + 
Sbjct: 355 AAAKDVLGRGAVFVDGAQVD 374


>gi|258592585|emb|CBE68894.1| Tyrosyl-tRNA synthetase (Tyrosine--tRNA ligase) (TyrRS) [NC10
           bacterium 'Dutch sediment']
          Length = 415

 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 102/361 (28%), Positives = 173/361 (47%), Gaps = 24/361 (6%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D +A  LH GH   L  L   Q  GH+ I L+G  T +IGDP+ R E+R+ +  +E+
Sbjct: 46  LGADPSAPDLHLGHTVVLRKLRQFQDFGHQVIFLIGDFTGMIGDPTGRSETRKPLSVEEV 105

Query: 100 QENIEKIK-GIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
           Q N +  K  IF    +  T     +  N+E WL  + +  ++R + +  +V R+L  + 
Sbjct: 106 QANADTYKRQIFRILDEDRT----EIRFNSE-WLSRMDFAGVIR-LAAQHTVARLLERDD 159

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
            + R +  + +   EF Y + Q YD V L  +    +++GG+DQ  N++ G +L      
Sbjct: 160 FQKRYREGRPIGVHEFLYPLAQGYDSVVLRAD----VELGGTDQKFNLLVGRELQRAYGQ 215

Query: 219 PKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT 277
               AL +PL+    G  KM K+L   I +++     Y       +I D  +V +A+ + 
Sbjct: 216 EPQVALITPLIEGTDGVQKMSKSLGNYIGIDEPAREVYGKAM---SIPDELIVKYAELVA 272

Query: 278 -TLP--MSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQ 334
             LP  +  +D   KL       AK  +A E+  +  G    E+AA  A   FD     +
Sbjct: 273 GVLPEAVEAMDEGLKLGTLHPRTAKAKVAWELVALYRG----EQAAEEAALEFDRMFRDK 328

Query: 335 HMP-TISISKDEVSR-GMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
            +P  IS+   E  R  + L+ LI ++G   S +EARR ++   + ++  ++ NE  ++ 
Sbjct: 329 RLPDEISLFAVEDERAAVDLVWLIKESGGTKSLSEARRLIRQGGVSLDGQVVRNECARVS 388

Query: 393 L 393
           L
Sbjct: 389 L 389


>gi|157413891|ref|YP_001484757.1| tyrosyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9215]
 gi|157388466|gb|ABV51171.1| Tyrosyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9215]
          Length = 412

 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 101/379 (26%), Positives = 178/379 (46%), Gaps = 28/379 (7%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D T + +H GH      L   Q  GH  + ++G  T+ IGDP+ ++++R  +  +++
Sbjct: 46  LGIDPTGTDIHLGHSILFKKLRAFQDNGHIAVLIIGDFTAQIGDPTGKNKTRVQLSEKQV 105

Query: 100 QENIEKI-------KGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNR 152
           ++N +         K    S + +       +  N+E WL  +    ++  +GS  +V++
Sbjct: 106 KDNAKTYLAQLGMGKPANESILDFDAKDRIEIRYNSE-WLKGLNLNSIIDLMGS-ATVSQ 163

Query: 153 MLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL 212
           ML+ E    R   +  +S  EF Y +LQ YD V +  +    +++GG+DQ  NI  G DL
Sbjct: 164 MLAKEEFNKRYTAQVPISLHEFLYPLLQGYDSVVVQSD----IELGGTDQKFNIAIGRDL 219

Query: 213 GERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVS 271
               K    F +  P+LT   G  KM K+    + L ++   P + +     + D  + +
Sbjct: 220 QRHFKQDPQFGVLLPILTGLDGVKKMSKSEFNTVALTED---PLSMYSKLEKVPDNIIPT 276

Query: 272 FAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSI 331
           + + LT L +S       L+     E ++ +A E+TT+ HG EEA KA +   + F    
Sbjct: 277 YFELLTELDLS------FLENSNPRELQRRMAFEVTTLFHGAEEALKAQSNCEKLF--LG 328

Query: 332 HSQHMPTIS-ISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQ 390
           H + +  I  IS  EV   +    L+       S++E++R +K   +KI++  + N  L 
Sbjct: 329 HKEKVGEIPEISLKEVVFPVKFFYLLSALKLFKSSSESKRSIKGGGVKIDSQKVINPDLV 388

Query: 391 IKLQDFDSTGNIKLSFGKK 409
              ++ D  G I L  GKK
Sbjct: 389 FNSKN-DLEGKI-LQIGKK 405


>gi|221311812|ref|ZP_03593659.1| tyrosyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           168]
 gi|221316138|ref|ZP_03597943.1| tyrosyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           NCIB 3610]
 gi|221321049|ref|ZP_03602343.1| tyrosyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           JH642]
 gi|221325334|ref|ZP_03606628.1| tyrosyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           SMY]
 gi|40242|emb|CAA36724.1| tyrosine tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           168]
          Length = 412

 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 99/378 (26%), Positives = 178/378 (47%), Gaps = 26/378 (6%)

Query: 19  HQISNPRELDILCSQGVVTA-----YIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           H++  P EL     + + T       +G D +A  +H GH   L  L   Q+ GH    L
Sbjct: 27  HEVIPPEELKAKLVKSISTGTPLKIKLGLDPSAPDVHLGHTVVLNKLRQFQENGHIVQLL 86

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
           +G  T  IGDP+ +  +R+ +  +E+Q N    K  F  F K    +   L  N++ WL 
Sbjct: 87  IGDFTGKIGDPTGKSAARKQLTDEEVQHN---AKTYFEQFGKVLDPEKVELHYNSK-WLK 142

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDC 193
           ++   D++ E+    +V R++  +    R+  ++ +S  EF Y ++Q YD V L    + 
Sbjct: 143 TLNLEDVI-ELAGKITVARLMERDDFEERIAMQKPISLHEFFYPLMQGYDSVVL----ES 197

Query: 194 RLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMT 252
            +++GG+DQ  N++ G    ER    K   +  PLL    G  KM K+    I +N+   
Sbjct: 198 DIELGGTDQHFNVLMGRHFQERYNKEKQVVILMPLLEGLDGVEKMSKSKHNYIGINE--- 254

Query: 253 SPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK-LQGKEIN--EAKKIIATEITTM 309
            P + +    ++ D+ +  +    T L + E  ++ K L+   ++  +AK ++A  I  M
Sbjct: 255 HPNDMYGKTMSLPDSLMKKYIHLATDLELEEKKQLVKDLETGAVHPRDAKMLLARTIVRM 314

Query: 310 VHGREEAEKAATAAMECFDMSIHSQHMPT-ISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
            HG    EKAA AA   F        +P  I     +  + + ++ L+VK    +S +EA
Sbjct: 315 YHG----EKAAEAAEHSFKTVFQENSLPEDIPAVNWKGEKTIAMIDLLVKLKLLSSKSEA 370

Query: 369 RRHLKSNAIKINNSIISN 386
           RR +++  ++I+   +++
Sbjct: 371 RRMIQNGGVRIDGEKVTD 388


>gi|16080897|ref|NP_391725.1| tyrosyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           168]
 gi|239938718|sp|P25151|SYY2_BACSU RecName: Full=Tyrosyl-tRNA synthetase 2; AltName:
           Full=Tyrosine--tRNA ligase 2; Short=TyrRS 2
 gi|413933|emb|CAA51565.1| ipa-9r [Bacillus subtilis subsp. subtilis str. 168]
 gi|2636381|emb|CAB15872.1| tyrosyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           168]
          Length = 413

 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 99/378 (26%), Positives = 178/378 (47%), Gaps = 26/378 (6%)

Query: 19  HQISNPRELDILCSQGVVTA-----YIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           H++  P EL     + + T       +G D +A  +H GH   L  L   Q+ GH    L
Sbjct: 28  HEVIPPEELKAKLVKSISTGTPLKIKLGLDPSAPDVHLGHTVVLNKLRQFQENGHIVQLL 87

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
           +G  T  IGDP+ +  +R+ +  +E+Q N    K  F  F K    +   L  N++ WL 
Sbjct: 88  IGDFTGKIGDPTGKSAARKQLTDEEVQHN---AKTYFEQFGKVLDPEKVELHYNSK-WLK 143

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDC 193
           ++   D++ E+    +V R++  +    R+  ++ +S  EF Y ++Q YD V L    + 
Sbjct: 144 TLNLEDVI-ELAGKITVARLMERDDFEERIAMQKPISLHEFFYPLMQGYDSVVL----ES 198

Query: 194 RLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMT 252
            +++GG+DQ  N++ G    ER    K   +  PLL    G  KM K+    I +N+   
Sbjct: 199 DIELGGTDQHFNVLMGRHFQERYNKEKQVVILMPLLEGLDGVEKMSKSKHNYIGINE--- 255

Query: 253 SPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK-LQGKEIN--EAKKIIATEITTM 309
            P + +    ++ D+ +  +    T L + E  ++ K L+   ++  +AK ++A  I  M
Sbjct: 256 HPNDMYGKTMSLPDSLMKKYIHLATDLELEEKKQLVKDLETGAVHPRDAKMLLARTIVRM 315

Query: 310 VHGREEAEKAATAAMECFDMSIHSQHMPT-ISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
            HG    EKAA AA   F        +P  I     +  + + ++ L+VK    +S +EA
Sbjct: 316 YHG----EKAAEAAEHSFKTVFQENSLPEDIPAVNWKGEKTIAMIDLLVKLKLLSSKSEA 371

Query: 369 RRHLKSNAIKINNSIISN 386
           RR +++  ++I+   +++
Sbjct: 372 RRMIQNGGVRIDGEKVTD 389


>gi|261416275|ref|YP_003249958.1| tyrosyl-tRNA synthetase [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|261372731|gb|ACX75476.1| tyrosyl-tRNA synthetase [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|302327342|gb|ADL26543.1| tyrosine--tRNA ligase [Fibrobacter succinogenes subsp. succinogenes
           S85]
          Length = 405

 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 98/365 (26%), Positives = 180/365 (49%), Gaps = 24/365 (6%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   +  L   Q  GH  + ++G  T+ IGDPS R+++R  +  +++
Sbjct: 44  MGVDPTAPDVHFGHTVVMRKLRQFQDLGHTVVLIVGDYTAQIGDPSGRNKARPRLTHEQV 103

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
            EN ++ +  F   ++    +    +  N  W   + +  +   +G  F+V +ML  E  
Sbjct: 104 LENAKEYQEQFFKVVR----RDQVEIHYNGEWFSKLPFSKVTELMGQ-FTVAQMLEREDF 158

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLG--ERLK 217
            +R      +S  EF Y ++Q YD V +  +    +++GG+DQ  N++ G DL   E ++
Sbjct: 159 HNRYTANTPISLHEFMYPMMQGYDSVAIQSD----VELGGTDQKFNVLRGRDLQIFEGME 214

Query: 218 TPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT 277
            P++      LL T    KM K++   + LN+     Y+      ++ D  V ++ + LT
Sbjct: 215 -PQIGLFMPILLGTDGKVKMSKSIGNYVGLNEPADVMYH---KIYSLSDNIVENWYELLT 270

Query: 278 TLPMSEIDR-MAKLQGKEI--NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQ 334
            +P+ E+ + MA +   ++  N+AK  +A +I T  +G E AE AA    E     IHS 
Sbjct: 271 NIPLDEVKQMMADIAAGKMNPNDAKHRLAIDIVTQYYGAEAAEAAAAKERE-----IHSG 325

Query: 335 H-MPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL 393
           + +P+ ++     +   G L L+V      S  EARR +++  +KI    +++ + QI++
Sbjct: 326 NAIPSDALECSVDAGSYGALDLLVNIKAFASKGEARRMVQNGGVKIGGEKLADPQAQIEI 385

Query: 394 QDFDS 398
           +  D 
Sbjct: 386 KGGDQ 390


>gi|296272457|ref|YP_003655088.1| tyrosyl-tRNA synthetase [Arcobacter nitrofigilis DSM 7299]
 gi|296096631|gb|ADG92581.1| tyrosyl-tRNA synthetase [Arcobacter nitrofigilis DSM 7299]
          Length = 402

 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 107/375 (28%), Positives = 174/375 (46%), Gaps = 28/375 (7%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   L  L   QK G     L+G  T+ IGDP+ + E+R+++  Q++ 
Sbjct: 44  GFDPTAPDLHLGHTVLLQKLSVFQKFGGIVQFLIGDFTASIGDPTGKSETRKVLSKQQVL 103

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           +N +  K     F      KT+ +   N  WL  +    L+  + S  +V RML  +   
Sbjct: 104 DNAQSYKN--QVFKILDETKTEVVF--NSNWLNDLGAAGLIN-LASNLTVARMLERDDFS 158

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R      ++  EF Y +LQ YD V L  +    +++GG+DQ  N++ G  L +     K
Sbjct: 159 KRYASNTPIAVSEFTYPLLQGYDSVFLKSD----IELGGTDQKFNLLMGRTLQKAYNIGK 214

Query: 221 LFA-LTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
             A L  P+L    G  KM K+L+  I +  E     N +    +I D  +  F + L++
Sbjct: 215 QQAVLMMPILEGLDGVQKMSKSLNNYIGVTDEAN---NMFGKVLSISDELMWRFYELLSS 271

Query: 279 LPMSEIDRMAK-LQGKEINE--AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQH 335
             + E+  + + +Q   I+    K  +A E+    HG    E A   A E F      + 
Sbjct: 272 KSLKEVKELHEGVQKGTIHPKAVKDSLAIELVDRYHG----EGAGLKAQEEFKKVFAKKD 327

Query: 336 MPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           +P+  I++ E+     +   +V     +ST++ARR +K+ A+KIN   I ++KL +    
Sbjct: 328 IPS-DIAEFELKADTWICQALVDTNLVSSTSQARRDIKAGAVKINQEKIDDDKLNL---- 382

Query: 396 FDSTGNIKLSFGKKN 410
             S G   L  GKK+
Sbjct: 383 --SKGEYILQKGKKS 395


>gi|152990508|ref|YP_001356230.1| tyrosyl-tRNA synthetase [Nitratiruptor sp. SB155-2]
 gi|151422369|dbj|BAF69873.1| tyrosyl-tRNA synthetase [Nitratiruptor sp. SB155-2]
          Length = 399

 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 105/375 (28%), Positives = 183/375 (48%), Gaps = 28/375 (7%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   L  L   QK G     ++G  T++IGDP+ + E+R+ +  + + 
Sbjct: 41  GFDPTAPDLHLGHTVLLQKLATFQKYGGIVQFIIGDFTAMIGDPTGKSETRKKLDRETVL 100

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           +N +  K     F      KT+ +   N +WL ++    L+ E+ + FSV RML  +   
Sbjct: 101 KNAQSYKD--QVFKVLNPAKTEVVF--NSSWLDALGASGLV-ELTTLFSVARMLERDDFE 155

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R K  + ++  EF Y +LQ YD V L  +    +++GG+DQ  N++ G  L       K
Sbjct: 156 KRYKAGRPIAISEFIYPLLQGYDSVHLKSD----IEIGGTDQKFNLLMGRHLQRSFGIGK 211

Query: 221 LFA-LTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
             A L  P+L    G  KM K+L   + + +E   P   +    +I D  +  + + L++
Sbjct: 212 EQAVLMMPILEGLDGVQKMSKSLGNYVGVTEE---PNEMFAKLMSISDELMWRYYELLSS 268

Query: 279 LPMSEIDRMAK-LQGKEINE--AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQH 335
             + EI  + + ++  EI+    K+++A EI    H      +AA AA E FD       
Sbjct: 269 KSLEEIQTLKEGVEKGEIHPKFVKELLAMEIVERYHDA----EAAKAAKEEFDRVHKKND 324

Query: 336 MPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           +PT  I + E+   + +   +V+AG   ST++ARR +++ A+++N   I+++   ++   
Sbjct: 325 IPT-DIKEVEMQGPVWIAKALVEAGLEPSTSQARRDIQAGAVRVNKEKITDKDFHLQ--- 380

Query: 396 FDSTGNIKLSFGKKN 410
              TG   +  GK+ 
Sbjct: 381 ---TGEYIVQVGKRK 392


>gi|124514296|gb|EAY55810.1| Tyrosyl-tRNA synthetase [Leptospirillum rubarum]
          Length = 403

 Score =  112 bits (279), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 92/348 (26%), Positives = 164/348 (47%), Gaps = 24/348 (6%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D T+  LH GH   L  L   Q  GH    ++G  T+ IGDP+ R E R+ +  ++I 
Sbjct: 49  GFDPTSPDLHLGHFVLLKKLRQFQDMGHLVQFVVGDFTAFIGDPTGRSEIRKPISPEQIA 108

Query: 101 ENIEKI-KGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           EN +   + +F    +  T      ++ N +W+  +  +D L  +    +V R L  +  
Sbjct: 109 ENAKTYERQVFRVLKQERTQ-----VVFNSSWMKKLG-VDGLVRLAGLQTVARFLERDDF 162

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
           + R+     +   E  Y ++Q YD V L  +    +++GGSDQ  N++ G DL  + +  
Sbjct: 163 QKRMNERLPIHLHELLYPLMQGYDSVVLESD----VELGGSDQLFNLLVGRDLLRQHQKE 218

Query: 220 KLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               LT PLL    G  KM K+L  A+ L     SP   +    +I D+ + S+    TT
Sbjct: 219 PQVVLTLPLLVGLDGEKKMSKSLRNAVALE---DSPDEMFGRLMSIPDSLIASY----TT 271

Query: 279 LPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPT 338
           L ++++D  A +Q     +AK  +A  +    HG + + KA  +  + F      + +P 
Sbjct: 272 L-LTDLDPDANIQLHP-RDAKIQMARSVVAQFHGEDNSNKAVESFEKVFSRKEIPEEIPV 329

Query: 339 ISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISN 386
             + +    R   L T++V++G A S ++A++ ++  A+  N   + +
Sbjct: 330 FHVKEGGSVR---LSTVMVQSGAAKSESQAKQLIRQGAVDWNGETVQD 374


>gi|126696853|ref|YP_001091739.1| tyrosyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9301]
 gi|126543896|gb|ABO18138.1| Tyrosyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9301]
          Length = 412

 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 100/379 (26%), Positives = 180/379 (47%), Gaps = 28/379 (7%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D T + +H GH      L   Q  GH  + ++G  T+ IGDP+ ++++R  +  +++
Sbjct: 46  LGIDPTGTDIHLGHSILFKKLRAFQDNGHIAVLIIGDFTAQIGDPTGKNKTRVQLSEKQV 105

Query: 100 QENIEKI-------KGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNR 152
           ++N +         K    S + + +     +  N+E WL  +    ++  +GS  +V++
Sbjct: 106 KDNAKTYLTQLGMGKPANESILDFDSKDRIEIRYNSE-WLKGLNLNSIIELMGS-ATVSQ 163

Query: 153 MLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL 212
           ML+ E    R   +  ++  EF Y +LQ YD V +  +    +++GG+DQ  NI  G DL
Sbjct: 164 MLAKEEFNKRYTSQVPIALHEFLYPLLQGYDSVVVQAD----IELGGTDQKFNIAIGRDL 219

Query: 213 GERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVS 271
               K    F +  P+LT   G  KM K+    + L ++   P + +     + D  + +
Sbjct: 220 QRHFKQEPQFGVLLPILTGLDGIKKMSKSEFNTVGLTED---PLSMYSKLEKVPDNLIPA 276

Query: 272 FAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSI 331
           + + LT L +S       L+     E ++ +A E+TT+ HG E+A KA +   + F    
Sbjct: 277 YFELLTELDLS------FLENSNPRELQRRMALEVTTLFHGDEKALKAQSNCEKLF--LG 328

Query: 332 HSQHMPTIS-ISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQ 390
           H + +  I  IS  EV   + L  L+       S++E++R +K   +KI++  + N  L 
Sbjct: 329 HKEKVGEIPEISLKEVVFPVKLFYLLSALKLFKSSSESKRSIKGGGVKIDSEKVINPDLV 388

Query: 391 IKLQDFDSTGNIKLSFGKK 409
              ++ D  G I L  GKK
Sbjct: 389 FNSKN-DLEGKI-LQIGKK 405


>gi|114048453|ref|YP_739003.1| tyrosyl-tRNA synthetase [Shewanella sp. MR-7]
 gi|113889895|gb|ABI43946.1| tyrosyl-tRNA synthetase [Shewanella sp. MR-7]
          Length = 398

 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 90/356 (25%), Positives = 166/356 (46%), Gaps = 20/356 (5%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  L   Q+ GH+ I L+G  T ++GDPS ++ +R  +  +++
Sbjct: 38  LGADPTAPDIHLGHTVILNKLRLFQELGHEVIFLIGDFTGMVGDPSGKNSTRPPLTREQV 97

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
             N E  K      +     + +     N +WL  +    ++R + S  +V RM+  +  
Sbjct: 98  LANAETYKEQVYKILDPAKTRIEF----NSSWLEPLGAAGMIR-LASQQTVARMMERDDF 152

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
           + R    QS++  EF Y +LQ YD V L  +    +++GG+DQ  N++ G +L +     
Sbjct: 153 KKRYASGQSIAIHEFMYPLLQGYDSVALKAD----VELGGTDQKFNLLMGRELQKAEGQK 208

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYN-FWQYWRNIDDADVVSFAKRLT 277
               +  PLL    G  KM K+    I +    + P N  +    +I D  +  + + L+
Sbjct: 209 PQAVIMMPLLEGLDGVKKMSKSAHNYIGV----SEPANEMFGKIMSISDELMWRYFELLS 264

Query: 278 TLPMSEIDRMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQH 335
             P++EI++  +    G    + K  +A EI    H +  AE A  A ++ F        
Sbjct: 265 FRPLAEIEQFKQDIANGANPRDTKIALAKEIIARFHDQAAAESAHQAFIDRFQKGAIPDD 324

Query: 336 MPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
           +P + ++  E   G+ +  L+  A    ST++A R +K  A+K++   + + ++ +
Sbjct: 325 IPEVELAAGE---GLAIANLLKDADLVGSTSDAMRMIKQGAVKMDGEKVDDSRMTL 377


>gi|323495918|ref|ZP_08100986.1| tyrosyl-tRNA synthetase [Vibrio sinaloensis DSM 21326]
 gi|323319134|gb|EGA72077.1| tyrosyl-tRNA synthetase [Vibrio sinaloensis DSM 21326]
          Length = 395

 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 94/353 (26%), Positives = 165/353 (46%), Gaps = 20/353 (5%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  L   Q+ GH    L+G  T ++GDP+ ++ +R  +  +++
Sbjct: 38  LGADPTAPDIHLGHTVILNKLRAFQELGHDVTFLIGDFTGMVGDPTGKNTTRPPLTREDV 97

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
             N E  K      +     K   +  N+E WL  +    ++R + +  +V RML  +  
Sbjct: 98  LRNAETYKEQVFKILDPAKTK---IQFNSE-WLSELGAEGMIR-LAANQTVARMLERDDF 152

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
           + R    Q ++  EF Y +LQ YD V +    +  +++GG+DQ  N++ G +L +     
Sbjct: 153 KKRYSNGQPIAIHEFMYPLLQGYDSVAM----ETDVELGGTDQKFNLLMGRELQKAHGQK 208

Query: 220 KLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               LT PLL    G  KM K+    I +++   +P   +    +I D  + ++ + L+ 
Sbjct: 209 PQVVLTMPLLVGLDGEKKMSKSAHNYIGISE---APSEMFGKIMSISDDLMWNYYELLSF 265

Query: 279 LPMSEI-DRMAKLQ-GKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM 336
            P++EI D  A ++ GK   + K  +A EI    H   +A+ A    +  F  +     M
Sbjct: 266 RPLNEIADLKAGVEAGKNPRDVKVALAKEIIARFHSEADADAAEQEFVNRFAKNQIPDEM 325

Query: 337 PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKL 389
           P       +   G+ +  L+ +AG   ST+EA R +K  A KI+   +++ K 
Sbjct: 326 PEF-----DFDAGLPVSNLLKEAGLCASTSEAMRMVKQGAAKIDGEKVADSKF 373


>gi|209517518|ref|ZP_03266358.1| tyrosyl-tRNA synthetase [Burkholderia sp. H160]
 gi|209502051|gb|EEA02067.1| tyrosyl-tRNA synthetase [Burkholderia sp. H160]
          Length = 416

 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 96/364 (26%), Positives = 179/364 (49%), Gaps = 28/364 (7%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  +  LQ  GH  I L+G  TS+IGDPS R+ +R  +  ++I
Sbjct: 58  LGLDPTAPDIHIGHTVVLNKMRQLQDLGHTVIFLIGDFTSLIGDPSGRNATRPPLTREQI 117

Query: 100 QENIEKIKGIF-SSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
           + N    K  F  + +     KT+  +  N  W   +   D + ++ S ++V R+L  E 
Sbjct: 118 ESN---AKTYFEQAALVLDRDKTE--IRYNSEWSMPLG-ADGMIKLASRYTVARILERED 171

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
              R +    +S  EF Y ++Q YD V L    +  L++GG+DQ  N++ G +L ++   
Sbjct: 172 FTKRFQGGVPISIHEFLYPLMQGYDSVAL----NADLELGGTDQKFNLLVGRELQKQYGQ 227

Query: 219 PKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT 277
            +   LT PLL    G  KM K+ +  I ++++   P   +    +I D  +  + + L+
Sbjct: 228 EQQCILTMPLLEGLDGVEKMSKSKNNYIGISEK---PTEMFGKLMSISDTLMWRYFELLS 284

Query: 278 TLPMSEIDRMAKL--QGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIH--- 332
             P+ EI    +    G+   + K ++  EI    H + +AE+    A+E F+       
Sbjct: 285 FRPLDEIAGFKREADAGRNPRDFKVMLGQEIVARFHSQADAER----ALEDFNHRAKGGV 340

Query: 333 SQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
              +P ++++   ++ G     L+ +A    ST+EA R+++   +KI+ + +S++ L+++
Sbjct: 341 PDDIPAVTLAGAPLAIGQ----LLKQANLVPSTSEALRNIEQGGVKIDGTAVSDKGLKVE 396

Query: 393 LQDF 396
             ++
Sbjct: 397 AGEY 400


>gi|255655541|ref|ZP_05400950.1| tyrosyl-tRNA synthetase [Clostridium difficile QCD-23m63]
 gi|296451532|ref|ZP_06893267.1| tyrosine--tRNA ligase [Clostridium difficile NAP08]
 gi|296880119|ref|ZP_06904086.1| tyrosine--tRNA ligase [Clostridium difficile NAP07]
 gi|296259597|gb|EFH06457.1| tyrosine--tRNA ligase [Clostridium difficile NAP08]
 gi|296428844|gb|EFH14724.1| tyrosine--tRNA ligase [Clostridium difficile NAP07]
          Length = 402

 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 89/352 (25%), Positives = 168/352 (47%), Gaps = 22/352 (6%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D +A  +H GH   L  +  LQ  GH+ + ++G  T  IGDP+ + ++R+ + ++++
Sbjct: 42  LGLDPSAPDIHLGHTVVLRKMKQLQDLGHQIVIIIGDFTGKIGDPTGKSKARKALTTEQV 101

Query: 100 QENIEKI-KGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
             N +   + IF    K  T     ++  N  WL  + + D+++ + +  +V RML  E 
Sbjct: 102 LANAKTYEEQIFKVLDKEKT-----IVRFNSEWLAKLNFEDVIK-LAATITVARMLERED 155

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
            + R + +  +S  EF Y ++QAYD + L    +  +++GG+DQ  N++ G  L      
Sbjct: 156 FKKRYEGQMPISVHEFFYPLMQAYDSIAL----EADIELGGTDQRFNLLMGRSLQREFGM 211

Query: 219 PKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT 277
                +  PL+    G  KM K+L   I +++E    Y   Q    I D  ++ +   +T
Sbjct: 212 ESQIVIMMPLIEGLDGKEKMSKSLGNYIGIDEEAGIMY---QKSMEIPDELIIKYYNLVT 268

Query: 278 TLPMSEIDRM-AKLQGKEIN--EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQ 334
            +   E++++ ++L+   +N  + K  +A EI T+ HG E A +A       F      +
Sbjct: 269 DVHPDEVNKIESQLKDGSVNPRDIKMNLAREIVTLYHGEESAREAEERFKSVFQKGQIPE 328

Query: 335 HMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISN 386
            + TI + +D    G  L+ ++V      S +E RR      +K+N   + +
Sbjct: 329 DIQTIQVKED----GFDLIEVLVVNEIVKSKSEVRRLASQGGVKVNGEKVED 376


>gi|117921496|ref|YP_870688.1| tyrosyl-tRNA synthetase [Shewanella sp. ANA-3]
 gi|117613828|gb|ABK49282.1| tyrosyl-tRNA synthetase [Shewanella sp. ANA-3]
          Length = 398

 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 90/356 (25%), Positives = 166/356 (46%), Gaps = 20/356 (5%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  L   Q+ GH+ I L+G  T ++GDPS ++ +R  +  +++
Sbjct: 38  LGADPTAPDIHLGHTVILNKLRLFQELGHEVIFLIGDFTGMVGDPSGKNSTRPPLTREQV 97

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
             N E  K      +     + +     N +WL  +    ++R + S  +V RM+  +  
Sbjct: 98  LANAETYKEQVYKILDPAKTRIEF----NSSWLEPLGAAGMIR-LASQQTVARMMERDDF 152

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
           + R    QS++  EF Y +LQ YD V L  +    +++GG+DQ  N++ G +L +     
Sbjct: 153 KKRYASGQSIAIHEFMYPLLQGYDSVALKAD----VELGGTDQKFNLLMGRELQKAEGQK 208

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYN-FWQYWRNIDDADVVSFAKRLT 277
               +  PLL    G  KM K+    I +    + P N  +    +I D  +  + + L+
Sbjct: 209 PQAVIMMPLLEGLDGVKKMSKSAHNYIGV----SEPTNEMFGKIMSISDELMWRYFELLS 264

Query: 278 TLPMSEIDRMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQH 335
             P++EI++  +    G    + K  +A EI    H +  AE A  A ++ F        
Sbjct: 265 FRPLAEIEQFKQDIANGANPRDTKIALAKEIIARFHDQAAAESAHQAFIDRFQKGAIPDD 324

Query: 336 MPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
           +P + ++  E   G+ +  L+  A    ST++A R +K  A+K++   + + ++ +
Sbjct: 325 IPEVELAAGE---GLAIANLLKDADLVGSTSDAMRMIKQGAVKMDGEKVDDSRMTL 377


>gi|33416567|gb|AAH55576.1| Wu:fi41d10 protein [Danio rerio]
          Length = 404

 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 62/176 (35%), Positives = 95/176 (53%), Gaps = 8/176 (4%)

Query: 20  QISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTS 79
           +++   E+  L   G  + Y G+D TA SLHAG+L  ++ L   +  GH  I+L+GG T+
Sbjct: 59  EVAAQAEIPDLLRSGPQSIYCGFDPTADSLHAGNLLAIIGLLHFRSAGHHIIALLGGATA 118

Query: 80  IIGDPSFRDESRRMMRSQEIQEN----IEKIKGIFSSFIKYGTGKTDAL----MLNNETW 131
            IGDPS R   R  +    +QEN    +E +  IF+    Y    +  L    +LNN +W
Sbjct: 119 QIGDPSGRQTERERLSPATVQENARGILESLHRIFTHHELYFCPDSSRLGRLTVLNNHSW 178

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
                 ++   E+G  F +  MLS  SV++RLK  + +SF EF+Y + QA+DF +L
Sbjct: 179 YKDYDLLEFFSEVGRSFRMGTMLSRHSVQTRLKSAEGMSFTEFSYQLFQAFDFYQL 234


>gi|56707811|ref|YP_169707.1| tyrosyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           SCHU S4]
 gi|110670282|ref|YP_666839.1| tyrosyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           FSC198]
 gi|224456880|ref|ZP_03665353.1| tyrosyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|254370308|ref|ZP_04986313.1| hypothetical protein [Francisella tularensis subsp. tularensis
           FSC033]
 gi|254874625|ref|ZP_05247335.1| tyrS, tyrosyl-tRNA synthetase [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|81597696|sp|Q5NGY5|SYY_FRATT RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|56604303|emb|CAG45324.1| Tyrosyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           SCHU S4]
 gi|110320615|emb|CAL08707.1| Tyrosyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           FSC198]
 gi|151568551|gb|EDN34205.1| hypothetical protein FTBG_00062 [Francisella tularensis subsp.
           tularensis FSC033]
 gi|254840624|gb|EET19060.1| tyrS, tyrosyl-tRNA synthetase [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|282158985|gb|ADA78376.1| tyrosyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           NE061598]
          Length = 396

 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 100/360 (27%), Positives = 172/360 (47%), Gaps = 36/360 (10%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G D TA  +H GH   +  L  LQ  GHK   L+G  T+ IGDP+ ++ +R  + ++E+ 
Sbjct: 39  GCDPTAPDIHLGHTVVINKLKQLQDLGHKIHFLIGDFTAQIGDPTGKNATRPPLTAEEVA 98

Query: 101 ENIEK-IKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
            N E   K +F    K  T     ++  N  W   +   ++++ + S  +V RML  +  
Sbjct: 99  ANAETYTKQVFKILDKDKT-----IIRRNGDWFNKMSASEMIK-LASKSTVARMLERDDF 152

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R K  QS+S  EF Y ++Q YD V  A N D  +++GG+DQ  N++ G +L ++    
Sbjct: 153 SKRYKGGQSISIHEFLYPLVQGYDSV--AMNAD--IELGGTDQKFNLLMGRELQKQQGQE 208

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYN---------FWQYWRNIDDADV 269
               +T PLL    G  KM K+    I + +     +           W+Y+      ++
Sbjct: 209 PQVIITMPLLEGLDGVKKMSKSSQNYIGIEEPANEIFGKIMSISDEFMWRYY------EL 262

Query: 270 VSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDM 329
           +SF K L  +   + D  A    ++I   K  +A E+    H +E+AE    +A + F  
Sbjct: 263 LSF-KSLENIAKLKQDVAAGANPRDI---KIELAKELIERFHSKEDAE----SAHQDFIQ 314

Query: 330 SIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKL 389
                 +P   I+  E+++ + +  L+ +AG   ST+EA R ++  A+KI+   +S+ K+
Sbjct: 315 RFQKNQIPD-DINVVELNQELPIANLLKEAGLVASTSEANRMIQQGAVKIDGEKLSDAKI 373


>gi|297170337|gb|ADI21372.1| tyrosyl-tRNA synthetase [uncultured gamma proteobacterium
           HF0010_20H22]
          Length = 407

 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 98/356 (27%), Positives = 168/356 (47%), Gaps = 24/356 (6%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   +  L   Q  GHK + L+G  T +IGDPS   E+R ++  ++++
Sbjct: 40  GFDPTAPDLHLGHTVLINKLKQFQDLGHKVVFLIGDFTGMIGDPSGVSETRPILTVEQLK 99

Query: 101 ENIEKIK-GIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           +N +  +  IF    K  T      +  N +W   +   +L+  + S  +V RML  +  
Sbjct: 100 KNSKTYQEQIFKILDKKKTK-----IEFNSSWFKRMTSAELIN-LSSKMTVARMLERDDF 153

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R K  + +S  EF Y ++Q YD  EL  +    +++GG+DQ  N++ G D+ +     
Sbjct: 154 SKRYKGNKPISIHEFIYPLVQGYDSFELKAD----VELGGTDQKFNLLVGRDIQKSFGME 209

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
           +   +T P+L    G  KM K+L   I L +   +P + +    +I D  +  +   L+ 
Sbjct: 210 EQIIMTLPILEGTDGVKKMSKSLKNYIGLQE---NPNDMFGKIMSISDELMWRYFDLLSF 266

Query: 279 LPMSEIDRMAKLQGKEIN--EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM 336
               EI  + K   + +N  EAKK++++EI T  HG E+A  A       F        +
Sbjct: 267 KTSEEIKEIKKKTERGLNPMEAKKMLSSEIVTRFHGEEKAMLAEKEFTNRFSKGKDPAEI 326

Query: 337 PTISISKDEVSRGMGLLTLIVKAGFA-----TSTNEARRHLKSNAIKINNSIISNE 387
             I +S    S  + ++ L+            S +EA+R L   A+KI+ + +++E
Sbjct: 327 KLIKLSMKASS--ISIIDLLSSEELGDKRLCKSKSEAKRMLSQGAVKIDGNKVTDE 380


>gi|148979044|ref|ZP_01815289.1| tyrosyl-tRNA synthetase [Vibrionales bacterium SWAT-3]
 gi|145962017|gb|EDK27305.1| tyrosyl-tRNA synthetase [Vibrionales bacterium SWAT-3]
          Length = 395

 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 96/353 (27%), Positives = 166/353 (47%), Gaps = 20/353 (5%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH      L   Q+ GH+   L+G  T+++GDPS ++ +R  +  +++
Sbjct: 38  LGADPTAPDIHLGHTVIFNKLRAFQELGHEVTFLIGDFTAMVGDPSGKNSTRPPLSREDV 97

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
            +N E  K     F      KT  +  N+E WL  +    ++R + S  +V RML  +  
Sbjct: 98  LKNAETYKE--QVFKILDPAKTQ-IRFNSE-WLSDLGAEGMIR-LASNQTVARMLERDDF 152

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
           + R    Q ++  EF Y +LQ +D V L    +  +++GG+DQ  N++ G +L +     
Sbjct: 153 KKRYAGGQPIAIHEFMYPLLQGHDSVAL----ESDVELGGTDQKFNLLMGRELQKAAGQK 208

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               L  PLL    G  KM K+    I +++   +P   +    +I D  + S+ + L+ 
Sbjct: 209 PQAVLMMPLLVGLDGVKKMSKSAHNYIGISE---APSEMFGKIMSISDDLMWSYYELLSF 265

Query: 279 LPMSEIDRM-AKLQ-GKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM 336
            P+ E+  + A ++ GK   + K I+A EI    H   +A+ A    +  F  +     M
Sbjct: 266 RPLEEVAELKAGVEAGKNPRDVKVILAKEIIARFHSEADADAAEQEFVNRFAKNQVPDDM 325

Query: 337 PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKL 389
           P       E   G+ +  ++ +AG   ST++A R +K  A KI    + + KL
Sbjct: 326 PEF-----EFEAGLPIANVLKEAGLVNSTSDAMRMIKQGAAKIEGEKVEDNKL 373


>gi|321313406|ref|YP_004205693.1| tyrosyl-tRNA synthetase [Bacillus subtilis BSn5]
 gi|320019680|gb|ADV94666.1| tyrosyl-tRNA synthetase [Bacillus subtilis BSn5]
          Length = 412

 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 100/378 (26%), Positives = 178/378 (47%), Gaps = 26/378 (6%)

Query: 19  HQISNPRELDILCSQGVVTA-----YIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           H++  P EL     + + T       +G D +A  +H GH   L  L   Q+ GH    L
Sbjct: 27  HEVIPPEELKAKLVKSISTGTPLKIKLGLDPSAPDVHLGHTVVLNKLRQFQENGHIVQLL 86

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
           +G  T  IGDP+ +  +R+ +  +E+Q N    K  F  F K    +   L  N++ WL 
Sbjct: 87  IGDFTGKIGDPTGKSAARKQLTDEEVQHN---AKTYFEQFGKVLDPEKVELHYNSK-WLK 142

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDC 193
           ++   D++ E+    +V R++  +    R+  ++ +S  EF Y ++Q YD V L    + 
Sbjct: 143 TLNLEDVI-ELAGKITVARLMERDDFEERIAMQKPISLHEFFYPLMQGYDSVVL----ES 197

Query: 194 RLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMT 252
            +++GG+DQ  NI+ G    ER    K   +  PLL    G  KM K+    I +N+   
Sbjct: 198 DIELGGTDQHFNILMGRHFQERYNKEKQVVILMPLLEGLDGVEKMSKSKHNYIGINE--- 254

Query: 253 SPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK-LQGKEIN--EAKKIIATEITTM 309
            P + +    ++ D+ +  +    T L + E  ++ K L+   ++  +AK ++A  I  +
Sbjct: 255 HPNDMYGKTMSLPDSLMKKYIHLATDLELEEKKQLVKDLETGAVHPRDAKMLLAKTIVRI 314

Query: 310 VHGREEAEKAATAAMECFDMSIHSQHMPT-ISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
            HG    EKAA AA   F        +P  I     +  + + ++ L+VK    +S +EA
Sbjct: 315 YHG----EKAAEAAEHSFKTVFQENSLPEDIPAVNWKGEKTIAMIDLLVKLKLLSSKSEA 370

Query: 369 RRHLKSNAIKINNSIISN 386
           RR +++  ++I+   I++
Sbjct: 371 RRMIQNGGVRIDGEKITD 388


>gi|315125691|ref|YP_004067694.1| tyrosyl-tRNA synthetase II [Pseudoalteromonas sp. SM9913]
 gi|315014205|gb|ADT67543.1| tyrosyl-tRNA synthetase II [Pseudoalteromonas sp. SM9913]
          Length = 399

 Score =  111 bits (277), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 100/385 (25%), Positives = 180/385 (46%), Gaps = 27/385 (7%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           IL E   + ++ + ++L I           G+D TA  LH GH   +  +   Q  GH+ 
Sbjct: 17  ILIEDELVEKLKSGKKLKIKA---------GFDPTAPDLHLGHTVLINKMKTFQDLGHEV 67

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           I L+G  T +IGDP+ ++ +R+ +   ++  N E  K     F      KT      N T
Sbjct: 68  IFLIGDFTGMIGDPTGKNVTRKPLTRDDVLANAETYKE--QVFKILDPAKTTVAF--NST 123

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           W+  +    +++ + +  +V RML  +  + R    QS++  EF Y ++Q +D V L   
Sbjct: 124 WMEKLGAAGMIK-LAARQTVARMLERDDFKKRYAGGQSIAIHEFLYPLVQGWDSVAL--- 179

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNK 249
            +  +++GG+DQ  N++ G +L +         L  PLL    G  KM K+L   I +  
Sbjct: 180 -ESDVELGGTDQRFNLLMGRELQKDEGQKPQTVLMMPLLEGTDGVQKMSKSLGNYIGITD 238

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI--DRMAKLQGKEINEAKKIIATEIT 307
              +P + +    +I D  +  +   L++L + +I   +    QG    + K  +A E+ 
Sbjct: 239 ---TPSDMFGKIMSISDVLMWRYYDLLSSLSIEQIAAQKQRVEQGTNPRDIKIELAKELI 295

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
              H   +A+ A    ++ F        +P ++++ DE S  + +  L+ +AG   ST+E
Sbjct: 296 ARFHSEADAQAAHDDFIQRFQKKALPDEIPELTVNIDEES--ILIANLLKEAGLVASTSE 353

Query: 368 ARRHLKSNAIKIN-NSIISNEKLQI 391
           A R +K  A+K+N    I++ KL+I
Sbjct: 354 AMRMIKQGAVKLNGEDKITDTKLEI 378


>gi|170725574|ref|YP_001759600.1| tyrosyl-tRNA synthetase [Shewanella woodyi ATCC 51908]
 gi|169810921|gb|ACA85505.1| tyrosyl-tRNA synthetase [Shewanella woodyi ATCC 51908]
          Length = 398

 Score =  111 bits (277), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 92/355 (25%), Positives = 164/355 (46%), Gaps = 18/355 (5%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  +   Q+ GH+ I L+G  T ++GDPS ++ +R  +  +++
Sbjct: 38  LGADPTAPDIHLGHTVILNKMRTFQELGHEVIFLIGDFTGMVGDPSGKNSTRPPLTREQV 97

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
             N E  K      +     + +     N +WL  +    ++R + S  +V RM+  +  
Sbjct: 98  LANAETYKQQVYKILDPAKTRIEF----NSSWLEPLGAAGMIR-LASKQTVARMMERDDF 152

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
           + R    QS++  EF Y +LQ YD V L    +  +++GG+DQ  N++ G +L +     
Sbjct: 153 KKRYASGQSIAIHEFMYPLLQGYDSVAL----EADVELGGTDQKFNLLMGRELQKSKGQK 208

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               +  PLL    G  KM K+    I +++        +    +I D  +  + + L+ 
Sbjct: 209 PQTVIMMPLLEGLDGVKKMSKSAHNYIGVSEPAG---EMFGKIMSISDDLMWRYLELLSF 265

Query: 279 LPMSEIDRMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM 336
            P+SEI++  +   QG    + K  +A EI    H    AE A    +  F        +
Sbjct: 266 RPLSEIEQFKRDVEQGTNPRDIKIALAKEIIARFHDEAAAEGAHQEFINRFQKGAIPDDI 325

Query: 337 PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
             + I+   V  G+ +  L+ +AG   ST++  R +K  A KI+ + I + +LQ+
Sbjct: 326 EELEIA---VGEGIAIANLLKEAGLVNSTSDGMRMIKQGAAKIDGAKIDDTRLQL 377


>gi|260775438|ref|ZP_05884335.1| tyrosyl-tRNA synthetase [Vibrio coralliilyticus ATCC BAA-450]
 gi|260608619|gb|EEX34784.1| tyrosyl-tRNA synthetase [Vibrio coralliilyticus ATCC BAA-450]
          Length = 395

 Score =  111 bits (277), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 91/353 (25%), Positives = 166/353 (47%), Gaps = 20/353 (5%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH      L   Q+ GH+   L+G  T+++GDP+ ++ +R  +  +++
Sbjct: 38  LGADPTAPDIHLGHTVIFNKLRLFQELGHEVTFLIGDFTAMVGDPTGKNSTRPPLSREDV 97

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
             N E  K      +     K   +  N+E WL  +    ++R + +  +V RML  +  
Sbjct: 98  LRNAETYKEQVFKILDPAKTK---IQFNSE-WLSELGAEGMIR-LAANQTVARMLERDDF 152

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
           + R    Q ++  EF Y +LQ +D V +    +  +++GG+DQ  N++ G +L +     
Sbjct: 153 KKRYAGGQPIAIHEFMYPLLQGWDSVAM----ETDVELGGTDQKFNLLMGRELQKANGQK 208

Query: 220 KLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               L  PLL    G  KM K+ +  I +++   +P   +    +I D  + S+ + L+ 
Sbjct: 209 PQAVLMMPLLVGLDGEKKMSKSANNYIGISE---APSEMFGKIMSISDDLMWSYYELLSF 265

Query: 279 LPMSEIDRMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM 336
            P+ EI++      +GK   + K ++A EI    H   +A+ A    +  F  +     M
Sbjct: 266 RPLEEIEQFKASIAEGKNPRDIKVLLAKEIIARFHSEADADAAEQEFVNRFAKNQIPDEM 325

Query: 337 PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKL 389
           P       E   G+ +  L+ +AG   ST+EA R +K  A KI++  +++ K 
Sbjct: 326 PEF-----EFDAGLPVSNLLKEAGLCASTSEAMRMVKQGAAKIDSEKVADSKF 373


>gi|94984115|ref|YP_603479.1| tyrosyl-tRNA synthetase [Deinococcus geothermalis DSM 11300]
 gi|94554396|gb|ABF44310.1| tyrosyl-tRNA synthetase [Deinococcus geothermalis DSM 11300]
          Length = 413

 Score =  111 bits (277), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 99/381 (25%), Positives = 172/381 (45%), Gaps = 27/381 (7%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D T   LH GH   L  +   Q  GHK I L+G  T++IGDPS + ++R  +  +E 
Sbjct: 46  LGADPTRPDLHLGHAVILRKMRQFQDLGHKVIMLIGDFTAMIGDPSGKSKTRPPLTLEET 105

Query: 100 QEN----IEKIKGIFSSFIKYGTGKTDALMLN-NETWLCSIKYIDLLREIGSFFSVNRML 154
           + N    +E+ + I          + + L L  N  WL  + Y D++R + S ++V R+L
Sbjct: 106 RANAQSYLEQCRLILRD-------EPELLELRFNSEWLEPLGYADVIR-LASRYTVARIL 157

Query: 155 SFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
             +    RL     +S  E  Y + Q YD V L  +    +++GG+DQ  N + G  L  
Sbjct: 158 ERDDFTKRLSAGTPISLHELLYPLTQGYDSVALHSD----VELGGTDQLFNNLVGRALQR 213

Query: 215 RLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFA 273
                    +T PLL    GT KM K+L   I L  E   P   +     + D  + ++ 
Sbjct: 214 DYGQEPQVVMTLPLLVGLDGTEKMSKSLDNYIGLTDE---PDVMFAGLMKVPDPLLENYF 270

Query: 274 KRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS 333
             LT LP   I   A L G  +  A + +A ++   +H + + + AA             
Sbjct: 271 TLLTDLPPERI--QALLAGHPVA-AHRELARQVVAWLHPQADLD-AAEERFRAVAKGGIP 326

Query: 334 QHMPTISISKDEV--SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
           +++PT++++++E+  S  + +  L+V AG   S   AR+ + +  +K+N    +  +  +
Sbjct: 327 ENVPTVTVAREELGESGRVSMARLVVLAGLEPSNGAARKLIGNRGLKLNGKPYTEPQGTL 386

Query: 392 KLQDFDSTGNIKLSFGKKNHI 412
              +    G + +  GK   +
Sbjct: 387 SQDELTEEGGVVIQKGKDRFV 407


>gi|157736895|ref|YP_001489578.1| tyrosyl-tRNA synthetase [Arcobacter butzleri RM4018]
 gi|157698749|gb|ABV66909.1| tyrosyl-tRNA synthetase [Arcobacter butzleri RM4018]
          Length = 402

 Score =  111 bits (277), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 97/354 (27%), Positives = 168/354 (47%), Gaps = 22/354 (6%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  +H GH   +  L   QK G     L+G  T+ IGDP+ + E+R+++  +++ 
Sbjct: 44  GFDPTAPDIHLGHTVLIQKLALFQKFGGIVQFLIGDFTATIGDPTGKSETRKVLSREQVL 103

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
            N E  K     F      KT  +   N +WL  +    L+  + S  +V RML  +   
Sbjct: 104 NNAETYKQ--QVFKILDENKTQVVF--NSSWLNELGTAGLIA-LASNLTVARMLERDDFS 158

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R      ++  EF Y +LQ YD + L    +  +++GG+DQ  N++ G  L +   + K
Sbjct: 159 KRYSSNTPIAVSEFLYPLLQGYDSIAL----NSDVELGGTDQKFNLLMGRTLQKAYNSKK 214

Query: 221 LFA-LTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
             A L  P+L    G  KM K+L   I +  E   P++ +    +I D  +  + + L++
Sbjct: 215 QQAVLMMPILEGLDGVQKMSKSLGNYIGVTDE---PFDMFGKILSISDELMWRYYELLSS 271

Query: 279 LPMSEIDRM---AKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQH 335
             + EI+ +    +   K   + K+ +A EI    HG    EKA     + F+     + 
Sbjct: 272 KSLKEIEELKINVENGSKHPKKVKEELAMEIVDRFHGAGFGEKAK----DEFEKVFAKKD 327

Query: 336 MPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKL 389
           +PT  I +    + + +   +V +    ST++ARR +K+NA+ IN   I+++KL
Sbjct: 328 IPT-EIEEFHFEKEIWICQALVDSKLVDSTSQARRDIKANAVSINQEKINDDKL 380


>gi|225619193|ref|YP_002720419.1| tyrosyl-tRNA synthetase [Brachyspira hyodysenteriae WA1]
 gi|225214012|gb|ACN82746.1| tyrosyl-tRNA synthetase [Brachyspira hyodysenteriae WA1]
          Length = 398

 Score =  111 bits (277), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 97/354 (27%), Positives = 165/354 (46%), Gaps = 20/354 (5%)

Query: 36  VTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMR 95
           +T   G+D TA  +H GH   L  +   Q  GHK I L+G  T  IGDPS + ++R  + 
Sbjct: 38  LTVKAGFDPTAPDIHLGHTVLLRKMRHFQLLGHKVIFLIGDFTGRIGDPSGKTKTRPRLT 97

Query: 96  SQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLS 155
            +++ +N E  K     F      KT  ++  N  WL  + + D+L  + S ++V +M+ 
Sbjct: 98  LEDVLKNAETYKQ--QVFKILDPEKT--IVEFNSKWLEKMSFADVLG-LTSRYTVAQMIE 152

Query: 156 FESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER 215
            +    R K  Q +S +EF Y + Q YD V L    +C +++GG+DQ  N++ G  L + 
Sbjct: 153 RDDFSKRYKNGQPISIMEFLYPLAQGYDSVAL----ECDVELGGNDQKFNLLVGRTLMKE 208

Query: 216 LKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAK 274
                   +T PLL    G  KM K+L   I +     S  + +    +I D+ +  + +
Sbjct: 209 YGLSPQAVITVPLLEGLDGVEKMSKSLGNYIGI---YDSAKDMYGKAMSIPDSLISKYME 265

Query: 275 RLTTLPMSEIDRMAKL--QGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIH 332
            LT +P+ +I    K    G+     K I+A EI  + HG EEA  A       F     
Sbjct: 266 LLTDIPIDDIKNYVKAMENGENPRNIKGILAKEIVKIYHGEEEALNAEEEFKRIFSSKGL 325

Query: 333 SQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISN 386
              +  ++I+KDE      +L ++     + S +  +R +   ++ ++N  I++
Sbjct: 326 PDEIEEVTINKDE-----NILNVLATCMSSESKSNLKRLVSQGSVTLDNEKIND 374


>gi|300309748|ref|YP_003773840.1| tyrosyl-tRNA synthetase [Herbaspirillum seropedicae SmR1]
 gi|300072533|gb|ADJ61932.1| tyrosyl-tRNA synthetase protein [Herbaspirillum seropedicae SmR1]
          Length = 453

 Score =  110 bits (276), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 102/370 (27%), Positives = 173/370 (46%), Gaps = 48/370 (12%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  LH GH   L  +  LQ  GH+ I L+G  TS+IGDPS R+ +R  +  ++I
Sbjct: 96  LGLDPTAPDLHLGHTVVLNKMRQLQNLGHQVIFLIGDFTSMIGDPSGRNATRPPLSREQI 155

Query: 100 QENIEKIKGIFS-SFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
           + N    K  F+ + +     KT+  +  N  W  ++    ++ ++ S ++V RM+  + 
Sbjct: 156 EIN---AKTYFAQASLVLDPSKTE--IRYNSEWCDALGSRGMI-QLASRYTVARMMERDD 209

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
              R K    +S  EF Y ++Q YD V L  +    L++GG+DQ  N++ G +L +    
Sbjct: 210 FTKRFKEGTPISVHEFLYPLMQGYDSVALKSD----LELGGTDQKFNLLVGRELQKDFGQ 265

Query: 219 PKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYN-------------FWQYWRNI 264
                LT PLL    G  KM K+    I +    T P N              W+Y+   
Sbjct: 266 EPQCILTMPLLEGLDGVEKMSKSKGNYIGI----TEPANTMFAKVMSISDVMMWRYY--- 318

Query: 265 DDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATA 322
              D++SF        M+EI   +     GK   + K  +A EI    H ++ AE A   
Sbjct: 319 ---DLLSFRS------MAEIAGYKAEVDAGKNPRDIKVALAQEIVARFHSQQAAEDALAD 369

Query: 323 AMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNS 382
            +      I    +P +S++       +G+  L+ +A    ST+EA R ++   ++I+ +
Sbjct: 370 FVNRSKGGI-PDDIPEVSLT----GAPLGIGQLLKQANLCASTSEALRMVEQGGVRIDGT 424

Query: 383 IISNEKLQIK 392
           +IS++ L+++
Sbjct: 425 VISDKGLKVE 434


>gi|315636072|ref|ZP_07891329.1| tyrosine--tRNA ligase [Arcobacter butzleri JV22]
 gi|315479641|gb|EFU70317.1| tyrosine--tRNA ligase [Arcobacter butzleri JV22]
          Length = 402

 Score =  110 bits (276), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 97/354 (27%), Positives = 168/354 (47%), Gaps = 22/354 (6%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  +H GH   +  L   QK G     L+G  T+ IGDP+ + E+R+++  +++ 
Sbjct: 44  GFDPTAPDIHLGHTVLIQKLALFQKFGGIVQFLIGDFTATIGDPTGKSETRKVLSREQVL 103

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
            N E  K     F      KT  +   N +WL  +    L+  + S  +V RML  +   
Sbjct: 104 NNAETYKQ--QVFKILDENKTQVVF--NSSWLNELGTAGLIA-LASNLTVARMLERDDFS 158

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R      ++  EF Y +LQ YD + L    +  +++GG+DQ  N++ G  L +   + K
Sbjct: 159 KRYSSNTPIAVSEFLYPLLQGYDSIAL----NSDVELGGTDQKFNLLMGRTLQKAYNSKK 214

Query: 221 LFA-LTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
             A L  P+L    G  KM K+L   I +  E   P++ +    +I D  +  + + L++
Sbjct: 215 QQAVLMMPILEGLDGVQKMSKSLGNYIGVTDE---PFDMFGKILSISDELMWRYYELLSS 271

Query: 279 LPMSEIDRM---AKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQH 335
             + EI+ +    +   K   + K+ +A EI    HG    EKA     + F+     + 
Sbjct: 272 KSLKEIEELKINVENGSKHPKKVKEELAMEIVDRFHGTGFGEKAK----DEFEKVFAKKD 327

Query: 336 MPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKL 389
           +PT  I +    + + +   +V +    ST++ARR +K+NA+ IN   I+++KL
Sbjct: 328 IPT-EIEEFHFEKEIWICQALVDSKLVDSTSQARRDIKANAVSINQEKINDDKL 380


>gi|262163955|ref|ZP_06031694.1| tyrosyl-tRNA synthetase [Vibrio mimicus VM223]
 gi|262027483|gb|EEY46149.1| tyrosyl-tRNA synthetase [Vibrio mimicus VM223]
          Length = 395

 Score =  110 bits (276), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 92/353 (26%), Positives = 159/353 (45%), Gaps = 20/353 (5%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  L   Q  GH    L+G  T ++GDP+ ++ +R  +  +++
Sbjct: 38  LGADPTAPDIHLGHTVILNKLRTFQDLGHDVTFLIGDFTGMVGDPTGKNTTRPPLTREDV 97

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
             N E  K      +     K   +  N+E WL  +    ++R + S  +V RML  +  
Sbjct: 98  LRNAETYKQQVFKILDPAKTK---IQFNSE-WLSQLGAEGMIR-LASNQTVARMLERDDF 152

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
           + R    Q ++  EF Y +LQ YD V +    +  +++GG+DQ  N++ G +L +     
Sbjct: 153 KKRYNNGQPIAIHEFMYPLLQGYDSVAM----ETDVELGGTDQKFNLLMGRELQKANGQK 208

Query: 220 KLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               L  PLL    G  KM K+    I +++   +P   +    +I D  + S+ + L+ 
Sbjct: 209 PQVVLMMPLLVGLDGEKKMSKSAHNYIGVSE---APSEMFGKIMSISDDLMWSYYELLSF 265

Query: 279 LPMSEIDRMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM 336
            P+ EI +       G    + K ++A EI    H   +A+ A    +  F      + M
Sbjct: 266 RPLEEIAQFKADVANGTNPRDIKILLAKEIIARFHTEADADAAEQEFINRFQKGAMPEEM 325

Query: 337 PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKL 389
           P       E   G+ +  L+  AG   ST++A R +K  A+K++   + + KL
Sbjct: 326 PEF-----EFDSGIAISNLLKDAGLVASTSDALRMIKQGAVKLDGEKLEDAKL 373


>gi|218886452|ref|YP_002435773.1| tyrosyl-tRNA synthetase [Desulfovibrio vulgaris str. 'Miyazaki F']
 gi|218757406|gb|ACL08305.1| tyrosyl-tRNA synthetase [Desulfovibrio vulgaris str. 'Miyazaki F']
          Length = 399

 Score =  110 bits (276), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 94/356 (26%), Positives = 153/356 (42%), Gaps = 41/356 (11%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   +  L  LQ+ GH  I L+G  T  IGDPS R ++R  +  ++I 
Sbjct: 39  GFDPTAPDLHLGHTVLIHKLRHLQELGHTVIFLIGDFTGQIGDPSGRSDTRPPLTPEQIL 98

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           EN E  K      +     + D     N  W+ +    D +R + S ++V RML  +   
Sbjct: 99  ENAETYKKQVFKILDPEKTEVDF----NSRWMNAFSAADFVR-LASRYTVARMLERDDFE 153

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R +  + ++  EF Y ++Q YD V L  +    +++GG+DQ  N++ G  L  +     
Sbjct: 154 KRYRDGRPIAIHEFLYPLVQGYDSVALRAD----VELGGTDQKFNLLVGRTLQSQYGQEP 209

Query: 221 LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYN---------FWQYW-----RNID 265
              LT PLL    G  KM K+L   + +++  +  +           W+Y+     R++D
Sbjct: 210 QCILTVPLLEGLDGVKKMSKSLGNYVGIDEPPSDMFGKIMSVSDDLMWRYYELVSARSLD 269

Query: 266 DADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAME 325
           D              ++++ R  +         K+ +A EIT   HG ++A +A      
Sbjct: 270 D--------------IADMKRRVQAGEAHPKAVKEDLAFEITARYHGDDKAAEARQGFNA 315

Query: 326 CFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINN 381
            F         P  S  + E S     L     AG   S  EA+R +K  A+ ++ 
Sbjct: 316 VFAGGGVPDDAPEHSCPQGEDSTPPVFLE---AAGLVKSRGEAKRLIKEGALSVDG 368


>gi|167622979|ref|YP_001673273.1| tyrosyl-tRNA synthetase [Shewanella halifaxensis HAW-EB4]
 gi|167353001|gb|ABZ75614.1| tyrosyl-tRNA synthetase [Shewanella halifaxensis HAW-EB4]
          Length = 398

 Score =  110 bits (276), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 102/386 (26%), Positives = 180/386 (46%), Gaps = 31/386 (8%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           IL E   + ++   R L I          +G D TA  +H GH   L  +   Q+ GH+ 
Sbjct: 18  ILLEADLLEKLKEGRPLKI---------KLGADPTAPDIHLGHTVILNKMRTFQELGHEV 68

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           I L+G  T ++GDPS ++ +R  +  +++  N E  K      +     + +     N T
Sbjct: 69  IFLIGDFTGMVGDPSGKNSTRPPLTREQVLANAETYKQQVYKILDPAKTRIEF----NST 124

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           WL  +    ++R + S  +V RM+  +  + R    QS++  EF Y +LQ YD V L   
Sbjct: 125 WLEPLGAAGMIR-LASQQTVARMMERDDFKKRYASGQSIAIHEFMYPLLQGYDSVAL--- 180

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNK 249
            +  +++GG+DQ  N++ G +L +         +  PLL    G  KM K+    I +++
Sbjct: 181 -EADVELGGTDQKFNLLMGRELQKSAGQKPQTVIMMPLLEGLDGVKKMSKSAHNYIGVSE 239

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM-AKLQ-GKEINEAKKIIATEIT 307
                   +    +I D  +  + + L+  P++EI++  A ++ G    + K  +A EI 
Sbjct: 240 PAG---EMFGKIMSISDVLMWRYFELLSFRPLTEIEQFKADVEAGANPRDVKIALAKEII 296

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMG--LLTLIVKAGFATST 365
              H     E +A AA + F       ++P   I + E++ G G  +  L+ +AG  +ST
Sbjct: 297 ARFHD----EASAEAAHQEFISRFQKGNIPD-DIEELEIAAGEGIAIANLLKEAGLVSST 351

Query: 366 NEARRHLKSNAIKINNSIISNEKLQI 391
           ++A R +K  A KI+   I + +LQ+
Sbjct: 352 SDAMRMIKQGAAKIDGDKIEDTRLQL 377


>gi|21244616|ref|NP_644198.1| tyrosyl-tRNA synthetase [Xanthomonas axonopodis pv. citri str. 306]
 gi|81798740|sp|Q8PFT1|SYY_XANAC RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|21110298|gb|AAM38734.1| tyrosyl-tRNA synthetase [Xanthomonas axonopodis pv. citri str. 306]
          Length = 403

 Score =  110 bits (276), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 102/380 (26%), Positives = 172/380 (45%), Gaps = 34/380 (8%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   L  +   Q+ GH+ I L+G  T +IGDPS ++ +R+ +  +++ 
Sbjct: 39  GFDPTAPDLHLGHTVLLNKMRQFQQLGHQVIFLIGDFTGMIGDPSGKNATRKPLSREDVL 98

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
            N    +       K    +   +  N+E W   +   D+++ + +  +V RML  +   
Sbjct: 99  ANARTYE---EQVFKILDRERTEVRFNSE-WFGQMSAADMIK-LSAQHTVARMLERDDFA 153

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R   +Q ++  EF Y ++Q YD V L  +    +++GG+DQ  N++ G  L E      
Sbjct: 154 KRFGSQQPIAIHEFLYPLVQGYDSVALKAD----VELGGTDQKFNLLMGRGLQEHYGQAP 209

Query: 221 LFALTSPLLTTASGT-KMGKTLSGAIWLNKEM------TSPYNFWQYWRNIDDADVVSFA 273
              LT PLL    G  KM K+L   I +N+        T        WR I   D++SF 
Sbjct: 210 QIVLTMPLLEGLDGVAKMSKSLGNYIGINEPAIDIVTKTMKIGDALTWRWI---DLLSF- 265

Query: 274 KRLTTLPMSEIDRM-AKLQGKEIN--EAKKIIATEITTMVHGREEAEKAATAAMECFDMS 330
                + M+E  R+  ++   E++  E K  +A E+ T  H    AE+A           
Sbjct: 266 ----DISMAEAARLKEEVASGELHPREVKLRLARELATRFHDAATAEQAIAGWHAVVTGQ 321

Query: 331 IHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQ 390
             +  +P   +     + G+ L  L+  AG   S +EA R LK  A+KI+  ++ +   +
Sbjct: 322 GDTGLLPLQEVVVP--AEGLRLAGLLTAAGLTPSNSEATRKLKERAVKIDGEVVEDPG-R 378

Query: 391 IKLQDFDSTGNIKLSFGKKN 410
           +  Q F+      +  GK+N
Sbjct: 379 VFTQGFEGV----IQVGKRN 394


>gi|297172518|gb|ADI23489.1| tyrosyl-tRNA synthetase [uncultured gamma proteobacterium
           HF0770_40P16]
          Length = 398

 Score =  110 bits (276), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 107/378 (28%), Positives = 171/378 (45%), Gaps = 38/378 (10%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           ++ ++ F+ Q+   R L I           G+D TA  LH GH   L  L   Q  GH+ 
Sbjct: 16  VIPKKDFLEQLKKRRPLRIKA---------GFDPTAPDLHLGHTVLLNKLKLFQDLGHQI 66

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           I L+G  T ++GDPS  +E+R ++  +EI +N E  K       K    K   +  N+E 
Sbjct: 67  IFLIGDFTGLVGDPSGVNETRPVLSEKEISKNSETYK---KQVFKILDPKKTEIRFNSE- 122

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           W+ +    + ++ + S  +V RML  +    R K +Q +S  EF Y +LQ YD V L  +
Sbjct: 123 WMNNFSSEEFIK-LSSSQTVARMLERDDFEKRYKSQQPISIHEFLYPLLQGYDSVVLKTD 181

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNK 249
               +++GG+DQ  N++ G ++ +         LT PLL    G  KM K+    + +  
Sbjct: 182 ----IELGGTDQKFNLLLGREVQKFYGLSPQSVLTLPLLEGLDGEKKMSKSFGNYLAIE- 236

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKKIIATEIT 307
              S    +    +I D  +  + + L+     EI  + K Q  G+     K I+A EI 
Sbjct: 237 --DSRDEMFGKLMSISDQLMWRYFQLLSFKTDKEIKNLEKSQKEGENPRNIKFILAEEIV 294

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPT------ISISKDEVSRGMGLLTLIVKAGF 361
              HG  E  KA       F +      +P+      I IS+ ++S    L  ++ +A  
Sbjct: 295 DRFHGTGEGSKARNE----FILRFQKGKLPSDIKEIFIKISEQDIS----LPRVLKEARM 346

Query: 362 ATSTNEARRHLKSNAIKI 379
             ST+EA R +K  A+KI
Sbjct: 347 VPSTSEALRLIKQGAVKI 364


>gi|262172293|ref|ZP_06039971.1| tyrosyl-tRNA synthetase [Vibrio mimicus MB-451]
 gi|261893369|gb|EEY39355.1| tyrosyl-tRNA synthetase [Vibrio mimicus MB-451]
          Length = 395

 Score =  110 bits (276), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 92/353 (26%), Positives = 159/353 (45%), Gaps = 20/353 (5%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  L   Q  GH    L+G  T ++GDP+ ++ +R  +  +++
Sbjct: 38  LGADPTAPDIHLGHTVILNKLRTFQDLGHDVTFLIGDFTGMVGDPTGKNTTRPPLTREDV 97

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
             N E  K      +     K   +  N+E WL  +    ++R + S  +V RML  +  
Sbjct: 98  LRNAETYKQQVFKILDPAKTK---IQFNSE-WLSQLGAEGMIR-LASNQTVARMLERDDF 152

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
           + R    Q ++  EF Y +LQ YD V +    +  +++GG+DQ  N++ G +L +     
Sbjct: 153 KKRYNNGQPIAIHEFMYPLLQGYDSVAM----ETDVELGGTDQKFNLLMGRELQKANGQK 208

Query: 220 KLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               L  PLL    G  KM K+    I +++   +P   +    +I D  + S+ + L+ 
Sbjct: 209 PQVVLMMPLLVGLDGEKKMSKSAHNYIGVSE---APSEMFGKIMSISDDLMWSYYELLSF 265

Query: 279 LPMSEIDRMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM 336
            P+ EI +       G    + K ++A EI    H   +A+ A    +  F      + M
Sbjct: 266 RPLEEIAQFKADVANGTNPRDIKILLAKEIIARFHTEADADAAEQEFINRFQKGAMPEEM 325

Query: 337 PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKL 389
           P       E   G+ +  L+  AG   ST++A R +K  A+K++   + + KL
Sbjct: 326 PEF-----EFDSGIAISNLLKDAGLVASTSDALRMIKQGAVKLDGEKLEDAKL 373


>gi|300776335|ref|ZP_07086193.1| tyrosine--tRNA ligase [Chryseobacterium gleum ATCC 35910]
 gi|300501845|gb|EFK32985.1| tyrosine--tRNA ligase [Chryseobacterium gleum ATCC 35910]
          Length = 398

 Score =  110 bits (276), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 100/364 (27%), Positives = 171/364 (46%), Gaps = 20/364 (5%)

Query: 36  VTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMR 95
           ++  +G+D TA  LH GH   L  L   Q  GH+ I ++G  T+ IGDPS ++++R+ + 
Sbjct: 32  LSVKLGFDPTAPDLHLGHAVVLKKLKQFQDLGHQIIIVVGSFTARIGDPSGKNKARKPLS 91

Query: 96  SQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLS 155
           ++E+Q N +      S  I     K    ++ N  WL ++ + D++ ++ S  +V +++ 
Sbjct: 92  AEEVQHNAQTYINQLSKIIDVRKTK----IVFNSDWLDTLNFSDVI-QLLSKVTVAQLMH 146

Query: 156 FESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER 215
                 R      ++  E  Y ILQ YD V++    +C ++MGG+DQ  N   G  L E 
Sbjct: 147 RNDFNKRFTENTPIAMHELVYPILQGYDSVKI----ECDIEMGGTDQLFNCTMGRQLQEV 202

Query: 216 LKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAK 274
            + P    +  PLL    G  KM K+L+  I L  E   P   +    +I DA +  F  
Sbjct: 203 HQMPAQIVMCMPLLRGLDGKEKMSKSLNNIIGLTDE---PNEMFGKTMSIPDALIEEFIN 259

Query: 275 RLTTLPMSE----IDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECF-DM 329
             T     E    + RMA  +G+     KKIIA  I T  H    A +A    +  F + 
Sbjct: 260 LTTDFSPQEKAELLFRMA--EGENPMNIKKIIAKNIITQYHNSTAANQAEQFFITQFQNK 317

Query: 330 SIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKL 389
           +   +   +I I+   +   + L+ L  +     S +  RR +++  ++INNS I++   
Sbjct: 318 NFEEKEYQSIPINSLSIDNKISLVKLCHQLKNDLSKSAIRRLIENGGVQINNSKITDSSE 377

Query: 390 QIKL 393
           +++L
Sbjct: 378 ELEL 381


>gi|159900216|ref|YP_001546463.1| tyrosyl-tRNA synthetase [Herpetosiphon aurantiacus ATCC 23779]
 gi|159893255|gb|ABX06335.1| tyrosyl-tRNA synthetase [Herpetosiphon aurantiacus ATCC 23779]
          Length = 393

 Score =  110 bits (276), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 91/352 (25%), Positives = 165/352 (46%), Gaps = 24/352 (6%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D T S +H GH   L  +   Q+ GH  + ++G  T+ IGDP+ RDESR  +  +E 
Sbjct: 35  LGIDPTRSDIHIGHAVALRKMRQFQELGHTVVLIVGDWTAQIGDPTGRDESRPRLTVEET 94

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSF--FSVNRMLSFE 157
           + N +    +   F      KT+        W       DL +  G    F+VN+ML+ E
Sbjct: 95  KSNAKYY--MDQVFKVIDPAKTEVRW--QSEWFGQ---FDLEKAFGLIGRFTVNQMLAHE 147

Query: 158 SVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK 217
           + R R +  Q L+ LE  Y +LQAYD + +  +    ++ GG+DQ  NI+ G  L E++ 
Sbjct: 148 TFRKRYEAGQQLTVLELMYPMLQAYDSIAIKPD----IEFGGTDQKFNILAGRQLMEQMG 203

Query: 218 TPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT 277
                 +  PL+    G KM K+ + ++ +   + SP + +    ++ D  +  + +  +
Sbjct: 204 MESQDVILVPLIIGTDGRKMSKSFNNSVDI---LMSPNDKYGKIMSMGDDVLPVYYEVWS 260

Query: 278 TLPMSEIDRMAK-LQGKEIN--EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQ 334
             P++E+  M++ ++   +N  + K  +A +I   + G   A +A    +  F       
Sbjct: 261 DAPLAEVKAMSEAIKAGSVNPRDLKMQLARDIIRQLDGEAAAAEAEAEFIRVFQQRDLPT 320

Query: 335 HMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISN 386
            MP +++S+        ++ L+V    A S  EARR +    +++    IS+
Sbjct: 321 DMPEVALSE-----AANIVDLLVSTKLAASKGEARRLIDGGGVRLAGEKISS 367


>gi|46579366|ref|YP_010174.1| tyrosyl-tRNA synthetase [Desulfovibrio vulgaris str. Hildenborough]
 gi|120603076|ref|YP_967476.1| tyrosyl-tRNA synthetase [Desulfovibrio vulgaris DP4]
 gi|81404913|sp|Q72DH6|SYY_DESVH RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|46448780|gb|AAS95433.1| tyrosyl-tRNA synthetase [Desulfovibrio vulgaris str. Hildenborough]
 gi|120563305|gb|ABM29049.1| tyrosyl-tRNA synthetase [Desulfovibrio vulgaris DP4]
 gi|311233191|gb|ADP86045.1| tyrosyl-tRNA synthetase [Desulfovibrio vulgaris RCH1]
          Length = 398

 Score =  110 bits (276), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 96/364 (26%), Positives = 164/364 (45%), Gaps = 26/364 (7%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   +  L   Q+ GH  I L+G  T +IGDPS R ++R  +  +++ 
Sbjct: 39  GFDPTAPDLHLGHTVLIHKLRHFQELGHTVIFLIGDFTGLIGDPSGRSDTRPPLTREQVL 98

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
            N E  K      +       D     N  W+      D +R + S ++V RM+  +   
Sbjct: 99  ANAETYKQQVFKILDPEKTVVDF----NSRWMGEFGAADFIR-LASRYTVARMMERDDFE 153

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R K  + ++  EF Y ++Q YD V L  +    +++GG+DQ  N++ G  L  +     
Sbjct: 154 KRYKEGRPIAVHEFLYPLVQGYDSVALKAD----VELGGTDQKFNLLVGRHLQSQYGQEP 209

Query: 221 LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTL 279
              LT PLL    G  KM K+L   + +++   SP + +    ++ D  +  + + +++ 
Sbjct: 210 QCILTMPLLEGLDGVKKMSKSLGNYVGIDE---SPADMFGKLMSVSDELMWRYFELISSR 266

Query: 280 PMSEI-DRMAKLQGKEINE--AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM 336
            + EI D   K++  E +    K+ +A E+TT  HG ++A +A       F         
Sbjct: 267 SLDEIADLRRKVETGEAHPKLVKESLAYELTTRYHGEDKAAEAQQGFNAVFAGGGVPDDA 326

Query: 337 PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKIN-------NSIISNEKL 389
           P  +    + S     L     AG   S  EA+R +K  A+ ++       NS +++ + 
Sbjct: 327 PVHACDHGDDSTPPAFLE---AAGLVKSRGEAKRLIKEGALSVDGVRCDDANSPLASGEY 383

Query: 390 QIKL 393
            IKL
Sbjct: 384 VIKL 387


>gi|222823624|ref|YP_002575198.1| tyrosyl-tRNA synthetase [Campylobacter lari RM2100]
 gi|222538846|gb|ACM63947.1| tyrosyl-tRNA synthetase [Campylobacter lari RM2100]
          Length = 400

 Score =  110 bits (276), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 106/374 (28%), Positives = 174/374 (46%), Gaps = 28/374 (7%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA+ LH GH   L  +  LQK G     L+G  T+ IGDP+ +  +R+ +  +E+ 
Sbjct: 42  GFDPTAADLHLGHTVVLSKMALLQKHGAIVQFLIGDFTAQIGDPTGKSVTRKKLDKEEVL 101

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           +N +  +     F      KT      N  WL  +    ++ E+ S FSV RML  +   
Sbjct: 102 KNAKTYEE--QVFKILDPSKTQIHF--NSKWLNELGAAGIV-ELTSTFSVARMLERDDFT 156

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R K +  +S  EF Y +LQ YD V L  +    ++MGG+DQ  N++ G  L       K
Sbjct: 157 KRFKEQSPISICEFLYPLLQGYDSVVLKSD----IEMGGTDQKFNLLMGRQLQRVYNCQK 212

Query: 221 LFA-LTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
             A +  PLL    G  KM K+L   I + ++     + +    +I D  +  + + L+ 
Sbjct: 213 EQAVMMMPLLEGLDGVNKMSKSLGNYIGVTEDAK---DMYAKVLSISDELMFRYYELLSE 269

Query: 279 LPMSEIDRMA---KLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQH 335
             ++EI ++    K       +AK+ +A EIT   H  E     A  A E FD    ++ 
Sbjct: 270 KSLNEISQIKDDIKNGSLHPKKAKENLALEITARFHSNE----CALKAKEEFDKVHSAKE 325

Query: 336 MPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           +P+  +    +   + L   IV+    +ST+ ARR + SNA+ +N   + +E+ Q++   
Sbjct: 326 LPS-DMPSFTLEGSIWLAKAIVECKMESSTSAARRLINSNAVSVNGEKVQDEQFQLE--- 381

Query: 396 FDSTGNIKLSFGKK 409
              +G   L  GK+
Sbjct: 382 ---SGEYILQVGKR 392


>gi|328675861|gb|AEB28536.1| Tyrosyl-tRNA synthetase cluster 1 [Francisella cf. novicida 3523]
          Length = 396

 Score =  110 bits (275), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 100/360 (27%), Positives = 173/360 (48%), Gaps = 36/360 (10%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G D TA  +H GH   +  L  LQ  GH+   L+G  T+ IGDP+ ++ +R  + ++E+ 
Sbjct: 39  GCDPTAPDIHLGHTVVINKLKQLQDLGHEIHFLIGDFTAQIGDPTGKNATRPPLTAEEVA 98

Query: 101 ENIEK-IKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
            N E   K +F    K  T     ++  N  W  ++   ++++ + S  +V RML  +  
Sbjct: 99  ANAETYTKQVFKILDKEKT-----VIRRNGDWFNNMSASEMIK-LASKSTVARMLERDDF 152

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R K  QS+S  EF Y ++Q YD V  A N D  +++GG+DQ  N++ G +L ++    
Sbjct: 153 SKRYKGGQSISIHEFLYPLVQGYDSV--AMNAD--IELGGTDQKFNLLMGRELQKQQGQE 208

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYN---------FWQYWRNIDDADV 269
               +T PLL    G  KM K+    I + +     +           W+Y+      ++
Sbjct: 209 PQVIITMPLLEGLDGVKKMSKSSQNYIGIEEPANEIFGKIMSISDELMWRYY------EL 262

Query: 270 VSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDM 329
           +SF K L T+   + D  A    ++I   K  +A E+    H + +AE    +A + F  
Sbjct: 263 LSF-KSLETIAKLKQDVAAGANPRDI---KIELAKELIERFHSKVDAE----SAHQDFIQ 314

Query: 330 SIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKL 389
                 +P   I+  E+S+ + +  L+ +AG   ST+EA R ++  A+KI+   +S+ K+
Sbjct: 315 RFQKNQIPD-DINVVELSQELPIANLLKEAGLVASTSEANRMIQQGAVKIDGEKVSDGKI 373


>gi|157164866|ref|YP_001467339.1| tyrosyl-tRNA synthetase [Campylobacter concisus 13826]
 gi|112801848|gb|EAT99192.1| tyrosyl-tRNA synthetase [Campylobacter concisus 13826]
          Length = 402

 Score =  110 bits (275), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 110/374 (29%), Positives = 180/374 (48%), Gaps = 28/374 (7%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   L  +  LQK G     L+G  T+ IGDP+ +  +R+ +  + + 
Sbjct: 44  GFDPTAPDLHLGHTVVLNKMALLQKHGAIVQFLIGDFTAQIGDPTGKSATRKKLDQETVL 103

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           +N    K       K    K   +M N++ W   +    ++ E+ S FSV RML  +   
Sbjct: 104 KN---AKTYEEQVFKILDPKKTVIMFNSK-WSNELGAAGMI-ELTSTFSVARMLERDDFE 158

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R+K    +S  EF Y +LQ YD V +     C ++MGG+DQ  N++ G  L       K
Sbjct: 159 KRIKAGNPISISEFMYPLLQGYDSVAMK----CDIEMGGTDQKFNLLMGRTLQRTYNIGK 214

Query: 221 LFA-LTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
             A +  PLL    G  KM K+L   I + +      + +    +I D  +  + + L+T
Sbjct: 215 EQAVIMMPLLEGLDGVNKMSKSLGNYIGVTENAN---DMFAKTLSISDELMWRWYELLST 271

Query: 279 LPMSEIDRMAK--LQGK-EINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQH 335
             + EI+ +      GK    +AK+ +A EIT   HG     +AA AAM  F+ S+HSQ+
Sbjct: 272 KTLGEIEELMNDVNSGKYHPKKAKEDLAYEITARYHGE----EAAKAAMAEFN-SVHSQN 326

Query: 336 MPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
                + +  +   + ++  + + G + S ++ARR +K+NA+ +N   IS+E+L++    
Sbjct: 327 QLPTDMKEFSLKAPIWIVEALSQCGLSESNSQARRDIKANAVSVNQEKISDEQLKL---- 382

Query: 396 FDSTGNIKLSFGKK 409
               G   L  GK+
Sbjct: 383 --GAGEYILQVGKR 394


>gi|285017200|ref|YP_003374911.1| tyrosyl-tRNA synthetase [Xanthomonas albilineans GPE PC73]
 gi|283472418|emb|CBA14923.1| probable tyrosyl-trna synthetase protein [Xanthomonas albilineans]
          Length = 403

 Score =  110 bits (275), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 97/357 (27%), Positives = 158/357 (44%), Gaps = 27/357 (7%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   L  L   Q+ GH+ I L+G  T +IGDP+ ++ +R+ +  +E+ 
Sbjct: 39  GFDPTAPDLHIGHTVLLNKLRQFQQLGHQVIFLIGDFTGMIGDPTGKNATRKPLTREEVL 98

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
            N    +     F      +T+     N  W   +   D++R  G   +V RML  +   
Sbjct: 99  ANARTYEE--QVFKVLDRARTEVRF--NSEWFGQMSAADMIRLAGQ-HTVARMLERDDFT 153

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R   +QS++  EF Y ++Q YD V L  +    +++GG+DQ  N++ G  L E    P 
Sbjct: 154 KRYAAQQSIAIHEFLYPLVQGYDSVALKAD----VELGGTDQKFNLLMGRGLQEHYGQPA 209

Query: 221 LFALTSPLLTTASGT-KMGKTLSGAIWLNKE----MTSPYNFWQ--YWRNIDDADVVSFA 273
              LT PLL    G  KM K+L   I +N+     +T          WR I   +++SF 
Sbjct: 210 QIVLTMPLLEGLDGVNKMSKSLGNYIGINEPAIDIVTKTMKIGDDLMWRWI---ELLSFD 266

Query: 274 KRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS 333
             L    M  + +  +       E K  +A E+ T  H    AE+A             +
Sbjct: 267 IGLNEAQM--LRQQVQAGSLHPREVKLRLARELATRFHDAVAAEQAIIGWHAVVTGQGDT 324

Query: 334 QHMP--TISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEK 388
             +P   + +  D    G+ +  L+  AG   S +EA R LK  A+++   ++ + +
Sbjct: 325 SVLPLQQLVVPAD----GVRIAALLTAAGLTASNSEATRKLKERAVRVAGEVVEDPQ 377


>gi|229592920|ref|YP_002875039.1| tyrosyl-tRNA synthetase [Pseudomonas fluorescens SBW25]
 gi|229364786|emb|CAY52795.1| tyrosyl-tRNA synthetase [Pseudomonas fluorescens SBW25]
          Length = 399

 Score =  110 bits (275), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 98/348 (28%), Positives = 158/348 (45%), Gaps = 18/348 (5%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   +  L   Q+ GH+ I L+G  T +IGDPS +  +R  +  +++ 
Sbjct: 39  GFDPTAPDLHLGHTVLINKLRQFQELGHQVIFLIGDFTGMIGDPSGKSATRPPLTREQVL 98

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           +N E  K     F      KT+     N TW+  +   D +R + S ++V RML  +   
Sbjct: 99  DNAETYK--TQVFKILDPAKTEVAF--NSTWMDQMGPADFIR-LTSQYTVARMLERDDFD 153

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R    Q ++  EF Y ++Q YD V L  +    +++GG+DQ  N++ G +L        
Sbjct: 154 KRYSTNQPIAIHEFLYPLVQGYDSVALRAD----VELGGTDQKFNLLMGRELQRAYGQEA 209

Query: 221 LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTL 279
              LT PLL    G  KM K+L   + + +   +P   +    +I DA +  + + L+  
Sbjct: 210 QCILTMPLLEGLDGVKKMSKSLGNYVGIQE---APGVMYGKLVSIPDALMWRYFELLSFR 266

Query: 280 PMSEID--RMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMP 337
            M EI+  R     G    + K  +A EI    HG E A  A  AA            +P
Sbjct: 267 SMDEINALRADVEAGANPRDVKIKLAEEIVARFHGDEAAANAHRAAGNRMKDGELPDDLP 326

Query: 338 TISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIIS 385
            I +S  E    M +  ++ KAG   ++  AR  L S  ++++  ++ 
Sbjct: 327 EIELSAAE---AMPIAAVLNKAGLVKNSAVARDLLGSGGVRVDGEVVD 371


>gi|168701261|ref|ZP_02733538.1| tyrosyl-tRNA synthetase [Gemmata obscuriglobus UQM 2246]
          Length = 404

 Score =  110 bits (275), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 93/338 (27%), Positives = 157/338 (46%), Gaps = 19/338 (5%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G D T   +H GH   L  L   Q+ GH  + ++G  T+ +GDPS RD SR+ + +++I 
Sbjct: 47  GIDPTGFDVHLGHTVPLRKLRQFQEFGHTAVLIIGTATAAVGDPSGRDASRQGLTTEQID 106

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           +N +     + + I      + A +  N  W     + D+L+ +G   ++ RM+  +   
Sbjct: 107 KNAQ----TYLTQIAKVVDVSKAEVRPNGEWFSKFTFADMLKLLG-HTTMQRMIERDDFT 161

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R+K   ++   E  Y ++Q +D VE+  +    +++GG++Q  N++ G DL        
Sbjct: 162 KRIKAGAAIYLHECLYPLMQGHDSVEIRAD----VELGGTEQLYNLMVGRDLQRAAGQEP 217

Query: 221 LFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTL 279
              LT P+L    G  KMGK++   I LN+       F +  R I D  +  +   LT  
Sbjct: 218 QICLTMPILRGTDGEKKMGKSVGNYIGLNEPAKD--MFGKTMR-IHDELLTEWYALLTDR 274

Query: 280 PMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI 339
              ++ R+         EAKK +A +I    HG EE   A  A  +    +I   ++  I
Sbjct: 275 SHEDVTRLLTTP----LEAKKTLAADIVRFYHG-EEVASATRADWDNAAKNIDPVNIDDI 329

Query: 340 SISKDEVSRG-MGLLTLIVKAGFATSTNEARRHLKSNA 376
           SI  D++  G M  + LI +     S +EARR ++  A
Sbjct: 330 SIPADKIKDGAMLAVDLIAETKLTASKSEARRKIEEGA 367


>gi|330447447|ref|ZP_08311096.1| tyrosyl-tRNA synthetase [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
 gi|328491638|dbj|GAA05593.1| tyrosyl-tRNA synthetase [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
          Length = 395

 Score =  110 bits (275), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 102/373 (27%), Positives = 168/373 (45%), Gaps = 26/373 (6%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  L   Q+ GH+   L+G  T ++GDP+ ++ +R  +  +++
Sbjct: 38  LGADPTAPDIHLGHTVILNKLRTFQELGHEVTFLIGDFTGMVGDPTGKNVTRPPLTREDV 97

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
             N E  K     F      KT      N TWL  +    ++R + S  +V RML  +  
Sbjct: 98  LRNAETYKE--QVFKILDPAKTKIAF--NSTWLSELGAEGMIR-LASNQTVARMLERDDF 152

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
           + R    + ++  EF Y +LQ YD V +    +  +++GG+DQ  N++ G +L +     
Sbjct: 153 KKRYTENRPIAIHEFMYPLLQGYDSVAM----ETDVELGGTDQKFNLLMGRELQKSHGQK 208

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               LT PLL    G  KM K+ +  I +     +P   +    +I D  + S+ + L+ 
Sbjct: 209 PQVVLTMPLLVGLDGVKKMSKSANNYIGI---ADAPSEMFGKIMSISDDLMWSYFELLSF 265

Query: 279 LPMSEIDRMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM 336
            PMSEI++       GK   + K ++A EI    H  EEAE A    +  F        M
Sbjct: 266 RPMSEIEQFKADVAAGKNPRDVKFLLAKEIIARFHSEEEAEAALQEFISRFQKGNLPDEM 325

Query: 337 PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
           P       E   G+ +  L+ +A    ST++A R ++  A+K +   + + KL       
Sbjct: 326 PEF-----EFEAGLPIANLLKEAALVNSTSDAMRMIRQGAVKQDGEKVEDTKL------V 374

Query: 397 DSTGNIKLSFGKK 409
            + GN     GK+
Sbjct: 375 PAAGNYVFQVGKR 387


>gi|325924893|ref|ZP_08186325.1| tyrosyl-tRNA synthetase [Xanthomonas perforans 91-118]
 gi|325544680|gb|EGD16031.1| tyrosyl-tRNA synthetase [Xanthomonas perforans 91-118]
          Length = 403

 Score =  110 bits (275), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 100/357 (28%), Positives = 163/357 (45%), Gaps = 31/357 (8%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   L  +   Q+ GH+ I L+G  T +IGDPS ++ +R+ +  +++ 
Sbjct: 39  GFDPTAPDLHLGHTVLLNKMRQFQQLGHQVIFLIGDFTGMIGDPSGKNATRKPLSREDVL 98

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
            N    +       K    +   +  N+E W   +   D+++ + +  +V RML  +   
Sbjct: 99  ANARTYE---EQVFKILDRERTEVRFNSE-WFGQMSAADMIK-LSAQHTVARMLERDDFA 153

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R   +Q ++  EF Y ++Q YD V L  +    +++GG+DQ  N++ G  L E      
Sbjct: 154 KRFGSQQPIAIHEFLYPLVQGYDSVALKAD----VELGGTDQKFNLLMGRGLQEHYGQAP 209

Query: 221 LFALTSPLLTTASGT-KMGKTLSGAIWLNKEM------TSPYNFWQYWRNIDDADVVSFA 273
              LT PLL    G  KM K+L   I +N+        T        WR I   D++SF 
Sbjct: 210 QIVLTMPLLEGLDGVAKMSKSLGNYIGINEPAIDIVTKTMKIGDELTWRWI---DLLSF- 265

Query: 274 KRLTTLPMSEIDRM-AKLQGKEIN--EAKKIIATEITTMVHGREEAEKAATAAMECFDMS 330
                + ++E  R+  ++   E++  E K  +A E+ T  H    AE+A           
Sbjct: 266 ----DISLAEAARLKEQVAAGELHPREVKLRLARELATRFHDAATAEQAIAGWHAVVTGQ 321

Query: 331 IHSQHMPTIS-ISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISN 386
             +  +P    +  DE  R  GLLT    AG   S +EA R LK  A+KI+  ++ +
Sbjct: 322 GDTSLLPLQEVVVPDEGLRLAGLLT---AAGLTPSNSEATRKLKERAVKIDGEVVED 375


>gi|90413143|ref|ZP_01221139.1| tyrosyl-tRNA synthetase [Photobacterium profundum 3TCK]
 gi|90325834|gb|EAS42286.1| tyrosyl-tRNA synthetase [Photobacterium profundum 3TCK]
          Length = 395

 Score =  110 bits (275), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 93/353 (26%), Positives = 163/353 (46%), Gaps = 20/353 (5%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  L   Q+ GH    L+G  T ++GDP+ ++ +R  +  +++
Sbjct: 38  LGADPTAPDIHLGHTVILNKLRTFQELGHDVTFLIGDFTGMVGDPTGKNTTRPPLTREDV 97

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
             N E  K      +     K +     N TWL  +    ++R + S  +V RML  +  
Sbjct: 98  LANAETYKEQVFKILDPAKTKIEF----NSTWLSELGAEGMIR-LASNQTVARMLERDDF 152

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
           + R    + ++  EF Y +LQ YD V +    +  +++GG+DQ  N++ G +L +     
Sbjct: 153 KKRYNGGRPIAIHEFMYPLLQGYDSVAM----ETDVELGGTDQKFNLLMGRELQKSHGQK 208

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               LT PLL    G  KM K+    I +++    P   +    +I D  + ++ + L+ 
Sbjct: 209 PQVVLTMPLLVGLDGVKKMSKSAHNYIGVSE---VPTEMFGKIMSISDDLMWNYFECLSF 265

Query: 279 LPMSEIDRMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM 336
            P+ EI++  +    GK   + K ++A EI    H   +A+ A    +  F      + M
Sbjct: 266 RPLEEIEQFKQDMANGKNPRDVKILLAKEIIARFHSAADADAAEQEFINRFQKGAMPEEM 325

Query: 337 PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKL 389
           P +     E   G+ +  L+  AG   ST++A R ++  A KI+ + I + KL
Sbjct: 326 PEL-----EFEAGIAISNLLKDAGLVNSTSDAMRMIRQGAAKIDGNKIEDTKL 373


>gi|254508205|ref|ZP_05120329.1| tyrosyl-tRNA synthetase [Vibrio parahaemolyticus 16]
 gi|219548822|gb|EED25823.1| tyrosyl-tRNA synthetase [Vibrio parahaemolyticus 16]
          Length = 395

 Score =  110 bits (275), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 93/353 (26%), Positives = 164/353 (46%), Gaps = 20/353 (5%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  L   Q+ GH    L+G  T ++GDP+ ++ +R  +  +++
Sbjct: 38  LGADPTAPDIHLGHTVILNKLRAFQELGHDVTFLIGDFTGMVGDPTGKNTTRPPLTREDV 97

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
             N E  K      +     K   +  N+E WL  +    ++R + +  +V RML  +  
Sbjct: 98  LRNAETYKEQVFKILDPAKTK---IQFNSE-WLSELGAEGMIR-LAANQTVARMLERDDF 152

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
           + R    Q ++  EF Y +LQ YD V +    +  +++GG+DQ  N++ G +L +     
Sbjct: 153 KKRYSGGQPIAIHEFMYPLLQGYDSVAM----ETDVELGGTDQKFNLLMGRELQKAHGQK 208

Query: 220 KLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               LT PLL    G  KM K+    I +++   +P   +    +I D  + ++ + L+ 
Sbjct: 209 PQVVLTMPLLVGLDGEKKMSKSAHNYIGISE---APSEMFGKIMSISDDLMWNYYELLSF 265

Query: 279 LPMSEIDRM-AKLQ-GKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM 336
            P+ EI  + A ++ GK   + K  +A EI    H   +A+ A    +  F  +     M
Sbjct: 266 RPLEEIAELKAGVESGKNPRDVKVALAKEIIARFHSEADADAAEQEFVNRFAKNQIPDEM 325

Query: 337 PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKL 389
           P  +        G+ +  L+ +AG   ST+EA R +K  A KI+   +++ K 
Sbjct: 326 PEFAFDA-----GLPVSNLLKEAGLCASTSEAMRMVKQGAAKIDGEKVADSKF 373


>gi|119899046|ref|YP_934259.1| tyrosyl-tRNA synthetase [Azoarcus sp. BH72]
 gi|119671459|emb|CAL95372.1| TyrS protein [Azoarcus sp. BH72]
          Length = 399

 Score =  110 bits (274), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 92/372 (24%), Positives = 175/372 (47%), Gaps = 22/372 (5%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   +  L   Q+ GH+ + L+G  T +IGDPS ++ +R  +  ++I 
Sbjct: 39  GFDPTAPDLHLGHTVLINKLRHFQELGHQVLFLIGDFTGMIGDPSGKNATRPPLSREQIL 98

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           EN +  +     F      KT+     N  W+  +    ++R + +  +V RML  +   
Sbjct: 99  ENAKTYQD--QVFKILDPAKTEICF--NSAWMEGLGSAGMIR-LAAQQTVARMLERDDFS 153

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R    QS++  EF Y + Q YD V +  +    +++GG+DQ  N++ G +L +      
Sbjct: 154 KRYANNQSIAIHEFLYPLCQGYDSVAMKAD----VELGGTDQRFNLLMGRELQKHYGQAP 209

Query: 221 LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTL 279
              L  PLL    G  KM K+L   I + +   +P   +    ++ D  +  +   L+  
Sbjct: 210 QCVLMMPLLEGLDGVNKMSKSLGNYIGIAE---APKEIFGKTMSVSDQLMWRYYDLLSFR 266

Query: 280 PMSEIDRM-AKLQ-GKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMP 337
             +EI R+ ++++ G+   + K ++A E+    HG+  A++A       F  +     +P
Sbjct: 267 STAEIARLRSEVEGGRNPRDVKVMLALELVARFHGQLAADEALADFEARFQRNAIPDDLP 326

Query: 338 TISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
            + +S    + G+ +  ++ +AG   +T+EA R +   A+++N   + ++ L +   D  
Sbjct: 327 EVRVSVG--AEGLPVFQVVKQAGLTGTTSEAIRMIDQGAVRLNGDRVEDKGLVLAAGD-- 382

Query: 398 STGNIKLSFGKK 409
               + L  GK+
Sbjct: 383 ---TVVLQVGKR 391


>gi|297170374|gb|ADI21408.1| tyrosyl-tRNA synthetase [uncultured gamma proteobacterium
           HF0010_21A16]
          Length = 404

 Score =  110 bits (274), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 113/427 (26%), Positives = 189/427 (44%), Gaps = 44/427 (10%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + L IL ERG    I       +L S+  +    G+D T+S LH GH   L  L   Q  
Sbjct: 6   EILEIL-ERGVEEIIPEKDFRSLLRSKKKLIIKAGFDPTSSDLHLGHTVLLNKLKQFQDL 64

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHK I L+G  T  IGDPS  +E+R  +   ++++N    K       K    K   +  
Sbjct: 65  GHKIIFLIGDFTGQIGDPSGVNETRPSVSKSDLKKN---AKTYSEQVFKILDSKKTKIEY 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           N+ +W   +K  ++++ + S  +V RML  +   +R K  + +S  E  Y ++Q YD   
Sbjct: 122 NS-SWFDKMKPSEIIK-LASSMTVARMLERDDFSNRFKGNRPISIHELLYPLVQGYDSYA 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAI 245
           L       +++GG+DQ  N++ G D+    K  +   +T P+L    G  KM K+L+  I
Sbjct: 180 LK----ADIELGGTDQKFNLLVGRDIQRSNKMKEQVVMTMPILEGLDGVKKMSKSLNNYI 235

Query: 246 WLNK--EM-------TSPYNFWQYWRNIDDADVVSF-AKRLTTLPMSEIDRMAKLQGKEI 295
            L +  EM        S    W+Y+      D++SF   ++     +E+ +     G   
Sbjct: 236 GLKEKPEMMFGKIMSISDELMWKYY------DLLSFKPNKVINSYKAEVKK-----GANP 284

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTL 355
            E K ++  EI    H ++ A+         F        +  +SI  +  +  + L+ L
Sbjct: 285 MEFKILLGEEIVERFHSKKAAQDTKEEFKNRFSKKKAPSKIKKVSIKIN--AEDISLIDL 342

Query: 356 IVKAGFA-----TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
           + +         +S +EARR +K +A+KI+N+ I++EK  +K              GK  
Sbjct: 343 LAEPKLKKNILCSSKSEARRMIKQSAVKIDNNRINDEKFFVK-----KGSKHTFQVGKHK 397

Query: 411 HIICHLC 417
           H+I  L 
Sbjct: 398 HLIIDLT 404


>gi|169656595|ref|YP_001428451.2| tyrosyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FTNF002-00]
 gi|164551663|gb|ABU61495.2| tyrosyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FTNF002-00]
          Length = 413

 Score =  110 bits (274), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 99/360 (27%), Positives = 172/360 (47%), Gaps = 36/360 (10%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G D TA  +H GH   +  L  LQ  GH+   L+G  T+ IGDP+ ++ +R  + ++E+ 
Sbjct: 56  GCDPTAPDIHLGHTVVINKLKQLQDLGHEIHFLIGDFTAQIGDPTGKNATRPPLTTEEVA 115

Query: 101 ENIEK-IKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
            N E   K +F    K  T     ++  N  W   +   ++++ + S  +V RML  +  
Sbjct: 116 ANAETYTKQVFKILDKDKT-----VICRNGDWFNKMSASEMIK-LASKSTVARMLERDDF 169

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R K  QS+S  EF Y ++Q YD V  A N D  +++GG+DQ  N++ G +L ++    
Sbjct: 170 SKRYKGGQSISIHEFLYPLVQGYDSV--AMNAD--IELGGTDQKFNLLMGRELQKQQGQE 225

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYN---------FWQYWRNIDDADV 269
               +T PLL    G  KM K+    I + +     +           W+Y+      ++
Sbjct: 226 PQVIITMPLLEGLDGVKKMSKSSQNYIGIEEPANEIFGKIMSISDELMWRYY------EL 279

Query: 270 VSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDM 329
           +SF K L  +   + D  A    ++I   K  +A E+    H +E+AE    +A + F  
Sbjct: 280 LSF-KSLENIAKLKQDVAAGANPRDI---KIELAKELIERFHSKEDAE----SAHQDFIQ 331

Query: 330 SIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKL 389
                 +P   I+  E+++ + +  L+ +AG   ST+EA R ++  A+KI+   +S+ K+
Sbjct: 332 RFQKNQIPD-DINVVELNQELPIANLLKEAGLVASTSEANRMIQQGAVKIDGEKLSDAKI 390


>gi|290953151|ref|ZP_06557772.1| tyrosyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           URFT1]
 gi|295313679|ref|ZP_06804263.1| tyrosyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           URFT1]
          Length = 396

 Score =  110 bits (274), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 99/360 (27%), Positives = 172/360 (47%), Gaps = 36/360 (10%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G D TA  +H GH   +  L  LQ  GH+   L+G  T+ IGDP+ ++ +R  + ++E+ 
Sbjct: 39  GCDPTAPDIHLGHTVVINKLKQLQDLGHEIHFLIGDFTAQIGDPTGKNATRPPLTTEEVA 98

Query: 101 ENIEK-IKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
            N E   K +F    K  T     ++  N  W   +   ++++ + S  +V RML  +  
Sbjct: 99  ANAETYTKQVFKILDKDKT-----VICRNGDWFNKMSASEMIK-LASKSTVARMLERDDF 152

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R K  QS+S  EF Y ++Q YD V  A N D  +++GG+DQ  N++ G +L ++    
Sbjct: 153 SKRYKGGQSISIHEFLYPLVQGYDSV--AMNAD--IELGGTDQKFNLLMGRELQKQQGQE 208

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYN---------FWQYWRNIDDADV 269
               +T PLL    G  KM K+    I + +     +           W+Y+      ++
Sbjct: 209 PQVIITMPLLEGLDGVKKMSKSSQNYIGIEEPANEIFGKIMSISDELMWRYY------EL 262

Query: 270 VSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDM 329
           +SF K L  +   + D  A    ++I   K  +A E+    H +E+AE    +A + F  
Sbjct: 263 LSF-KSLENIAKLKQDVAAGANPRDI---KIELAKELIERFHSKEDAE----SAHQDFIQ 314

Query: 330 SIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKL 389
                 +P   I+  E+++ + +  L+ +AG   ST+EA R ++  A+KI+   +S+ K+
Sbjct: 315 RFQKNQIPD-DINVVELNQELPIANLLKEAGLVASTSEANRMIQQGAVKIDGEKLSDAKI 373


>gi|294666117|ref|ZP_06731375.1| tyrosyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
 gi|292604131|gb|EFF47524.1| tyrosyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
          Length = 404

 Score =  110 bits (274), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 103/398 (25%), Positives = 177/398 (44%), Gaps = 48/398 (12%)

Query: 30  LCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDE 89
           L S   +    G+D TA  LH GH   L  +   Q+ GH+ I L+G  T +IGDPS ++ 
Sbjct: 28  LASGKPLRVKAGFDPTAPDLHLGHTVLLNKMRQFQQLGHQVIFLIGDFTGMIGDPSGKNA 87

Query: 90  SRRMMRSQEI-------QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLR 142
           +R+ +  +++       +E + KI     + +++           N  W   +   D+++
Sbjct: 88  TRKPLSREDVLVNARTYEEQVFKILDRERTEVRF-----------NSEWFGQMSAADMIK 136

Query: 143 EIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQ 202
            + +  +V RML  +    R   +Q ++  EF Y ++Q YD V L  +    +++GG+DQ
Sbjct: 137 -LSAQHTVARMLERDDFAKRFGSQQPIAIHEFLYPLVQGYDSVALKAD----VELGGTDQ 191

Query: 203 WGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEM------TSPY 255
             N++ G  L E         LT PLL    G  KM K+L   I +N+        T   
Sbjct: 192 KFNLLMGRGLQEHYGQAPQIVLTMPLLEGLDGVAKMSKSLGNYIGINEPAIDIVTKTMKI 251

Query: 256 NFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA-KLQGKEIN--EAKKIIATEITTMVHG 312
                WR I   D++SF      + ++E  R+  ++   E++  E K  +A E+ T  H 
Sbjct: 252 GDALTWRWI---DLLSF-----DISLAEAARLKEQVASGELHPREVKLRLARELATRFHD 303

Query: 313 REEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHL 372
              AE+A             +  +P   +     + G+ L  L+  AG   S +EA R L
Sbjct: 304 AATAEQAIAGWHAVVTGQGDTSLLPLQEVVVP--AEGLRLAGLLTAAGLTPSNSEATRKL 361

Query: 373 KSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
           K  A+KI+  ++ +   ++  Q F+      +  GK+N
Sbjct: 362 KERAVKIDGEVVEDPS-RVFTQGFEGV----IQVGKRN 394


>gi|269837291|ref|YP_003319519.1| tyrosyl-tRNA synthetase [Sphaerobacter thermophilus DSM 20745]
 gi|269786554|gb|ACZ38697.1| tyrosyl-tRNA synthetase [Sphaerobacter thermophilus DSM 20745]
          Length = 407

 Score =  110 bits (274), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 93/345 (26%), Positives = 161/345 (46%), Gaps = 23/345 (6%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D T   +H GH      L   Q  GH+ + ++G  T+ IGDPS R   R+M+  +E+
Sbjct: 47  LGVDPTRPDIHLGHYVCFRKLREFQALGHQIVVIIGDWTARIGDPSGRSVQRQMLSEEEV 106

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           + N +     F   +     +    +    TW       D++  + S ++V +ML+ E  
Sbjct: 107 RRNAQTYLDQFFKVVDVDRAE----IRWQSTWYNDFTLADVI-HLTSKYTVAQMLAREDF 161

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R      ++  E  Y +LQAYD V +  +    +++GG+DQ  N++   D+   +   
Sbjct: 162 AKRFNEGSPIAITELLYPLLQAYDSVAVEAD----VEIGGTDQTFNLLVARDIQREMGQR 217

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               LT PLL    G  KM K+    I +N     P   +    +I D+ +  + + LT 
Sbjct: 218 PQNILTVPLLVGTDGVQKMSKSFDNYIAVND---PPEEMFGKIMSIPDSLLGDYYRLLTD 274

Query: 279 LPMSEIDRM--AKLQGKEIN--EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQ 334
           +P SEI  M  A ++G E+N  + K+ +   I T +H  E+AE A  A    +      +
Sbjct: 275 VPESEITSMLDAAVRG-EVNPRDLKERLGMIIVTDLHSAEDAEAAREAFDRVYRRRELPE 333

Query: 335 HMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKI 379
            MP +++ ++E      +L L++ AG A + NEARR +    +++
Sbjct: 334 DMPEVAVPREE-----RILPLLITAGMARTNNEARRLVTQGGVRL 373


>gi|146301128|ref|YP_001195719.1| tyrosyl-tRNA synthetase [Flavobacterium johnsoniae UW101]
 gi|146155546|gb|ABQ06400.1| predicted tyrosyl-tRNA synthetase [Flavobacterium johnsoniae UW101]
          Length = 400

 Score =  110 bits (274), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 107/377 (28%), Positives = 173/377 (45%), Gaps = 25/377 (6%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G+D TA  LH GH   L  L   Q  GH+ + L+G  T+ IGDP+ +++SR+ +  QE+
Sbjct: 38  LGFDPTAPDLHLGHAVVLKKLKQFQDLGHQIVILVGSFTARIGDPTGKNKSRKPLNVQEV 97

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           Q N E      S  I        A ++ N  WL S+ + +++ +I S  +V +++     
Sbjct: 98  QHNAETYIAQLSKIIDV----EKAQIVFNSDWLDSLSFSEVI-QIMSNVTVAQLMQRNDF 152

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R      ++  E  Y ILQ +D V++    +  ++MGG+DQ  N   G  L E  K  
Sbjct: 153 NKRFTENTPIAMHELVYPILQGFDSVKI----NADIEMGGTDQLFNCTMGRQLQETFKKS 208

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               +  PLL    G  KM K+L+  I L  E   P   +    +I D  ++ F +  T 
Sbjct: 209 PQIVMCMPLLRGLDGKEKMSKSLNNIIGLTDE---PNEMFGKTMSIPDDLILEFLELTTD 265

Query: 279 LPMSEIDRMA-KLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQH-- 335
               E   +  +L+ +     KKIIA  I    H  ++A+KA    +  F      +   
Sbjct: 266 FSTKEKQEIKNRLKEENPMNIKKIIAKNIINQYHDEKKADKAEDFFVNQFQNKNFEEKSF 325

Query: 336 MPTISISKDEVSRGMGLLTL--IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL 393
           +P +  S +  S  M L+ L   +K     S N  RR ++S A+++NN  I+N    I+L
Sbjct: 326 VPVLISSLENKSDQMALIDLCAFIKNDITKSAN--RRLIESGAVQVNNLKITNPYELIEL 383

Query: 394 QDFDSTGNIKLSFGKKN 410
           +        K+  GK+N
Sbjct: 384 K-----KETKIKIGKRN 395


>gi|319789980|ref|YP_004151613.1| tyrosyl-tRNA synthetase [Thermovibrio ammonificans HB-1]
 gi|317114482|gb|ADU96972.1| tyrosyl-tRNA synthetase [Thermovibrio ammonificans HB-1]
          Length = 407

 Score =  110 bits (274), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 97/357 (27%), Positives = 162/357 (45%), Gaps = 18/357 (5%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   L  L   Q+ GH+   L+G  T++IGDP+ ++E+R  +  +E+ 
Sbjct: 38  GFDPTAPDLHLGHTVLLWKLRDFQELGHEVYFLIGDFTAMIGDPTGKNETRPPLTREEVL 97

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           +N E          K    +   ++ N+E WL  +   DL++ + S ++V RML  +   
Sbjct: 98  KNAETYA---QQVFKILDPEKTVVVFNSE-WLGQMSAADLIK-LASKYTVARMLERDDFE 152

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R K  + +   EF Y +LQ YD V L  +    +++GG+DQ  N++ G  L       +
Sbjct: 153 KRFKEGRPIHIHEFIYPLLQGYDSVVLKAD----VELGGTDQKFNLLMGRHLQREYGQEE 208

Query: 221 LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTL 279
              +  P+L    G  KM K+L   I +   +  P   +     I D  +  + + +T +
Sbjct: 209 QVCIMMPILEGLDGVQKMSKSLGNYIGI---LEPPEEQFGKVMRISDELMWRYYRLVTRV 265

Query: 280 P---MSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM 336
           P   + E++R  K       EAKK +A  I    HG E A++A       F  S      
Sbjct: 266 PEEEIEEMERAVKEGRLHPMEAKKRLAETIVATFHGEEAAKRAREHFERVF--SRRELPP 323

Query: 337 PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL 393
                  +     + L  L+   G   ST+E RR ++  A++I+   I +E  ++ L
Sbjct: 324 EIPEPEVEVPENPIWLPKLLKILGLVKSTSEGRRQIRGGAVRIDGRKILDEDYKVDL 380


>gi|85711799|ref|ZP_01042855.1| Tyrosyl-tRNA synthetase [Idiomarina baltica OS145]
 gi|85694414|gb|EAQ32356.1| Tyrosyl-tRNA synthetase [Idiomarina baltica OS145]
          Length = 400

 Score =  110 bits (274), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 97/363 (26%), Positives = 179/363 (49%), Gaps = 27/363 (7%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   +  L   Q  GHK + L+G  T +IGDP+ ++ +R+ +  +++ 
Sbjct: 40  GFDPTAPDLHLGHTVLINKLRVFQDYGHKVVFLIGDFTGMIGDPTGKNVTRKPLTREDVL 99

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
            N E  K     F      KT+ +  N+E W+ ++   D + ++ +  +V RML  +  +
Sbjct: 100 ANAETYKE--QVFKILDPTKTE-IRFNSE-WMNNLGA-DGMIKLAARQTVARMLERDDFK 154

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL----GERL 216
            R +  QS++  EF Y ++Q +D VEL  +    ++MGG+DQ  N++ G +L    G+R 
Sbjct: 155 KRYQANQSIAIHEFLYPLVQGWDSVELKAD----VEMGGTDQRFNLLMGRELQKEEGQRP 210

Query: 217 KTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYN-FWQYWRNIDDADVVSFAK 274
           +T     +  PLL    G  KM K+L+  I +    T P N  +    +I D  +  + +
Sbjct: 211 QT----VIMMPLLEGLDGVQKMSKSLNNYIGI----TEPANEMFGKVMSISDELMWRYFE 262

Query: 275 RLTTLPMSEIDRMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIH 332
            L+  P+ +++   +    G+     K ++A EI    H    A+KA    ++ F  +  
Sbjct: 263 LLSFRPLEQVEDFKQQVADGENPRNIKVLLAKEIIARFHDEAAADKAEQDFIQRFQKNAI 322

Query: 333 SQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
              +  + +   +   G+ +   + +AG  +ST++A R +K +A+K +   I++ KL   
Sbjct: 323 PDDIKEVEVKVGD--DGIAIGNALKEAGLVSSTSDAMRMIKQSAVKRDGEKITDTKLMCT 380

Query: 393 LQD 395
            +D
Sbjct: 381 KED 383


>gi|254369294|ref|ZP_04985306.1| tyrosyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FSC022]
 gi|157122244|gb|EDO66384.1| tyrosyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FSC022]
          Length = 396

 Score =  110 bits (274), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 99/360 (27%), Positives = 172/360 (47%), Gaps = 36/360 (10%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G D TA  +H GH   +  L  LQ  GH+   L+G  T+ IGDP+ ++ +R  + ++E+ 
Sbjct: 39  GCDPTAPDIHLGHTVVINKLKQLQDLGHEIHFLIGDFTAQIGDPTGKNATRPPLTTEEVA 98

Query: 101 ENIEK-IKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
            N E   K +F    K  T     ++  N  W   +   ++++ + S  +V RML  +  
Sbjct: 99  ANAETYTKQVFKILDKDKT-----VIRRNGDWFNKMSASEMIK-LASKSTVARMLERDDF 152

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R K  QS+S  EF Y ++Q YD V  A N D  +++GG+DQ  N++ G +L ++    
Sbjct: 153 SKRYKGGQSISIHEFLYPLVQGYDSV--AMNAD--IELGGTDQKFNLLMGRELQKQQGQE 208

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYN---------FWQYWRNIDDADV 269
               +T PLL    G  KM K+    I + +     +           W+Y+      ++
Sbjct: 209 PQVIITMPLLEGLDGVKKMSKSSQNYIGIEEPANEIFGKIMSISDELMWRYY------EL 262

Query: 270 VSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDM 329
           +SF K L  +   + D  A    ++I   K  +A E+    H +E+AE    +A + F  
Sbjct: 263 LSF-KSLENIAKLKQDVAAGANPRDI---KIELAKELIERFHSKEDAE----SAHQDFIQ 314

Query: 330 SIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKL 389
                 +P   I+  E+++ + +  L+ +AG   ST+EA R ++  A+KI+   +S+ K+
Sbjct: 315 RFQKNQIPN-DINVVELNQELPIANLLKEAGLVASTSEANRMIQQGAVKIDGEKLSDAKI 373


>gi|187931843|ref|YP_001891828.1| tyrosyl-tRNA synthetase [Francisella tularensis subsp. mediasiatica
           FSC147]
 gi|187712752|gb|ACD31049.1| tyrosyl-tRNA synthetase [Francisella tularensis subsp. mediasiatica
           FSC147]
          Length = 396

 Score =  110 bits (274), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 99/360 (27%), Positives = 172/360 (47%), Gaps = 36/360 (10%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G D TA  +H GH   +  L  LQ  GH+   L+G  T+ IGDP+ ++ +R  + ++E+ 
Sbjct: 39  GCDPTAPDIHLGHTVVINKLKQLQDLGHEIHFLIGDFTAQIGDPTGKNATRPPLTAEEVA 98

Query: 101 ENIEK-IKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
            N E   K +F    K  T     ++  N  W   +   ++++ + S  +V RML  +  
Sbjct: 99  ANAETYTKQVFKILDKDKT-----VIRRNGDWFNKMSASEMIK-LASKSTVARMLERDDF 152

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R K  QS+S  EF Y ++Q YD V  A N D  +++GG+DQ  N++ G +L ++    
Sbjct: 153 SKRYKGGQSISIHEFLYPLVQGYDSV--AMNAD--IELGGTDQKFNLLMGRELQKQQGQE 208

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYN---------FWQYWRNIDDADV 269
               +T PLL    G  KM K+    I + +     +           W+Y+      ++
Sbjct: 209 PQVIITMPLLEGLDGVKKMSKSSQNYIGIEEPANEIFGKIMSISDELMWRYY------EL 262

Query: 270 VSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDM 329
           +SF K L  +   + D  A    ++I   K  +A E+    H +E+AE    +A + F  
Sbjct: 263 LSF-KSLENIAKLKQDVAAGANPRDI---KIELAKELIERFHSKEDAE----SAHQDFIQ 314

Query: 330 SIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKL 389
                 +P   I+  E+++ + +  L+ +AG   ST+EA R ++  A+KI+   +S+ K+
Sbjct: 315 RFQKNQIPD-DINVVELNQELPIANLLKEAGLVASTSEANRMIQQGAVKIDGEKLSDAKI 373


>gi|325109325|ref|YP_004270393.1| tyrosyl-tRNA synthetase [Planctomyces brasiliensis DSM 5305]
 gi|324969593|gb|ADY60371.1| tyrosyl-tRNA synthetase [Planctomyces brasiliensis DSM 5305]
          Length = 408

 Score =  109 bits (273), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 80/344 (23%), Positives = 159/344 (46%), Gaps = 17/344 (4%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G D T   +H GH   L  +   Q+ GH+ + ++G  T+++GDPS RD++R  + +++++
Sbjct: 47  GIDPTGIDMHLGHTVPLRKMRQFQEMGHQAVIIIGNYTAMVGDPSGRDDTRARLTAEQVE 106

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
            N +      +  I        A +  N  W   + +  +L E+ S  +V ++L+ E   
Sbjct: 107 ANAQDYLRQVAKVIDLDA----AEIHRNGDWFSKMDFARML-ELCSKVTVAQLLNREDFS 161

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R K EQ++   E  Y ++Q +D VE+  +    +++GG++Q    +   DL    +  +
Sbjct: 162 KRFKAEQAIFLHECLYPLMQGWDSVEIRAD----IELGGTEQLYTFMLARDLQRDQEMSQ 217

Query: 221 LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTL 279
              + SP+L    G  +MGK+L   I +     +PY+  + +  + D  +  + + LT L
Sbjct: 218 QIGIMSPILVGTDGVRRMGKSLGNYIGI---ADAPYDMAKKFMQLPDDVMRPYFELLTDL 274

Query: 280 PMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI 339
           P+ +++ +     K   +AK+ +A  +    H  EE E A     +          +P +
Sbjct: 275 PLDQVEEILAGHPK---QAKQALAKLVIGEYHSSEEGEAAIARWEQEISGGGLPADIPEV 331

Query: 340 SISKDEVSRG-MGLLTLIVKAGFATSTNEARRHLKSNAIKINNS 382
           ++   ++  G M  + L+   G   S  E+RR ++    K+   
Sbjct: 332 NLEPAQLEDGQMKAVDLLHALGLVASKGESRRLIQQGGAKLGEE 375


>gi|89256317|ref|YP_513679.1| tyrosyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           LVS]
 gi|115314762|ref|YP_763485.1| tyrosyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           OSU18]
 gi|167010168|ref|ZP_02275099.1| tyrosyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FSC200]
 gi|254367649|ref|ZP_04983670.1| tyrosyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           257]
 gi|89144148|emb|CAJ79407.1| Tyrosyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           LVS]
 gi|115129661|gb|ABI82848.1| tyrosine--tRNA ligase [Francisella tularensis subsp. holarctica
           OSU18]
 gi|134253460|gb|EBA52554.1| tyrosyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           257]
          Length = 396

 Score =  109 bits (273), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 99/360 (27%), Positives = 172/360 (47%), Gaps = 36/360 (10%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G D TA  +H GH   +  L  LQ  GH+   L+G  T+ IGDP+ ++ +R  + ++E+ 
Sbjct: 39  GCDPTAPDIHLGHTVVINKLKQLQDLGHEIHFLIGDFTAQIGDPTGKNATRPPLTTEEVA 98

Query: 101 ENIEK-IKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
            N E   K +F    K  T     ++  N  W   +   ++++ + S  +V RML  +  
Sbjct: 99  ANAETYTKQVFKILDKDKT-----VIRRNGDWFNKMSASEMIK-LASKSTVARMLERDDF 152

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R K  QS+S  EF Y ++Q YD V  A N D  +++GG+DQ  N++ G +L ++    
Sbjct: 153 SKRYKGGQSISIHEFLYPLVQGYDSV--AMNAD--IELGGTDQKFNLLMGRELQKQQGQE 208

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYN---------FWQYWRNIDDADV 269
               +T PLL    G  KM K+    I + +     +           W+Y+      ++
Sbjct: 209 PQVIITMPLLEGLDGVKKMSKSSQNYIGIEEPANEIFGKIMSISDELMWRYY------EL 262

Query: 270 VSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDM 329
           +SF K L  +   + D  A    ++I   K  +A E+    H +E+AE    +A + F  
Sbjct: 263 LSF-KSLENIAKLKQDVAAGANPRDI---KIELAKELIERFHSKEDAE----SAHQDFIQ 314

Query: 330 SIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKL 389
                 +P   I+  E+++ + +  L+ +AG   ST+EA R ++  A+KI+   +S+ K+
Sbjct: 315 RFQKNQIPD-DINVVELNQELPIANLLKEAGLVASTSEANRMIQQGAVKIDGEKLSDAKI 373


>gi|226952841|ref|ZP_03823305.1| tyrosyl-tRNA synthetase [Acinetobacter sp. ATCC 27244]
 gi|226836462|gb|EEH68845.1| tyrosyl-tRNA synthetase [Acinetobacter sp. ATCC 27244]
          Length = 410

 Score =  109 bits (273), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 96/386 (24%), Positives = 170/386 (44%), Gaps = 42/386 (10%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           I+SE   + ++   R L +           G+D TA  LH GH   +  L   Q  GH+ 
Sbjct: 27  IISEEDLLKKLKENRPLRVKA---------GFDPTAPDLHLGHTVLINKLKTFQDLGHEV 77

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEI-------QENIEKIKGIFSSFIKYGTGKTDA 123
             L+G  T++IGDPS +  +R  +  +++       QE + KI     + +++       
Sbjct: 78  TFLIGDYTAMIGDPSGKSATRPPLSKEQVLANAKTYQEQVFKILDPNKTKVRF------- 130

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
               N  W       DL+ ++ S  +V+RML  +    R    Q ++  EF Y ++Q YD
Sbjct: 131 ----NSEWFNQRTAADLI-QLASQQTVSRMLERDDFTKRYNNHQPIAIHEFLYPLVQGYD 185

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLS 242
            + L    +  +++GG+DQ  N++ G  L  R        +T P+L    G  KM K+L 
Sbjct: 186 SIAL----EADVELGGTDQTFNLLMGRTLQGRYGQESQVCITVPILEGLDGVNKMSKSLG 241

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI----DRMAKLQGKEINEA 298
             I +     +P   +Q   ++ D+ +  +   L+   + EI    D MA   G+   E 
Sbjct: 242 NYIGV---FDTPGAMYQKILSMPDSLIERYFDLLSFKSLDEIKVLLDEMAA--GRNPQEI 296

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVK 358
           K+I+A E+    H  E AE A  +A          +  P + IS+ E    + + T++  
Sbjct: 297 KRILALELVERFHDAEAAENAHKSAGNRVTEGEVPEDTPEVIISRGEFGGELFIATILRV 356

Query: 359 AGFATSTNEARRHLKSNAIKINNSII 384
           AG   +   A+  +   A+K++ +++
Sbjct: 357 AGLNPNAASAKDAVGRGAVKVDWNVV 382


>gi|298244240|ref|ZP_06968046.1| tyrosyl-tRNA synthetase [Ktedonobacter racemifer DSM 44963]
 gi|297551721|gb|EFH85586.1| tyrosyl-tRNA synthetase [Ktedonobacter racemifer DSM 44963]
          Length = 404

 Score =  109 bits (273), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 95/345 (27%), Positives = 157/345 (45%), Gaps = 23/345 (6%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D T   L  GH      L   Q+ GHKP+ ++G  T+ +GDPS R E+R+ +  +++
Sbjct: 39  LGVDPTHYDLTIGHAVVFRKLRQFQQLGHKPVVVIGDWTARLGDPSGRVEARKPLTEEQV 98

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
             N       F   +     +    +     W  S    D ++ +G + +V +ML  +  
Sbjct: 99  NANAATYLDQFFRIVD----REKTEVRRQSEWFDSFSLGDAIKLLG-YKTVAQMLERDDF 153

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R K    +   EF Y +LQ YD V L  +    +++GG+DQ  N++ G +L       
Sbjct: 154 SKRYKSGIEIYLAEFMYPLLQGYDSVALRAD----VELGGTDQTFNLLVGRELQPTFGQK 209

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYN-FWQYWRNIDDADVVSFAKRLT 277
               LT  L+    G  KMGK+L   I +    T+P N  +    ++ D  + ++ + LT
Sbjct: 210 SQQILTVNLIVGLDGVKKMGKSLDNYIAI----TAPANDMYGKLMSLPDHAMRTYFEALT 265

Query: 278 TLPMSEIDRMA-KLQGKEIN--EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQ 334
            +   E++    K+Q   +N  + K+ +A EI T  H   EA++A     E F      +
Sbjct: 266 DVSTEELNEFERKIQEGTLNPRDVKRRMAREIVTEFHTLSEAQEAE----EAFIRQFSER 321

Query: 335 HMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKI 379
            +PT  I    VS    ++ L+V AG A S N+AR  +K   + I
Sbjct: 322 KLPT-DIPSYTVSEPTNIVALMVTAGLAASNNKARELIKQGGVSI 365


>gi|262401671|ref|ZP_06078237.1| tyrosyl-tRNA synthetase [Vibrio sp. RC586]
 gi|262352088|gb|EEZ01218.1| tyrosyl-tRNA synthetase [Vibrio sp. RC586]
          Length = 395

 Score =  109 bits (273), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 91/353 (25%), Positives = 160/353 (45%), Gaps = 20/353 (5%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  L   Q  GH    L+G  T ++GDP+ ++ +R  +  +++
Sbjct: 38  LGADPTAPDIHLGHTVILNKLRTFQDLGHDVTFLIGDFTGMVGDPTGKNTTRPPLTREDV 97

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
             N E  K      +     K   +  N+E WL  +    ++R + S  +V RML  +  
Sbjct: 98  LRNAETYKQQVFKILDPAKTK---IQFNSE-WLSQLGAEGMIR-LASNQTVARMLERDDF 152

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
           + R    Q ++  EF Y +LQ YD V +    +  +++GG+DQ  N++ G +L +     
Sbjct: 153 KKRYNNGQPIAIHEFMYPLLQGYDSVAM----ETDVELGGTDQKFNLLMGRELQKSNGQK 208

Query: 220 KLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               L  PLL    G  KM K+    I +++   +P   +    +I D  + S+ + L+ 
Sbjct: 209 PQVVLMMPLLVGLDGEKKMSKSAHNYIGVSE---APSEMFGKIMSISDDLMWSYYELLSF 265

Query: 279 LPMSEIDRMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM 336
            P+ +I +       G    + K ++A EI    H   +A+ A    +  F      + M
Sbjct: 266 RPLEQIAQFKADVKNGTNPRDIKILLAKEIIARFHSESDADAAEQEFINRFQKGAMPEEM 325

Query: 337 PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKL 389
           P       E + G+ +  L+  AG   ST++A R +K  A+K++   + + KL
Sbjct: 326 PEF-----EFATGIAISNLLKDAGLVGSTSDALRMIKQGAVKLDGEKLEDAKL 373


>gi|258623090|ref|ZP_05718103.1| tyrosyl-tRNA synthetase [Vibrio mimicus VM573]
 gi|258584703|gb|EEW09439.1| tyrosyl-tRNA synthetase [Vibrio mimicus VM573]
          Length = 395

 Score =  109 bits (273), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 91/353 (25%), Positives = 160/353 (45%), Gaps = 20/353 (5%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  L   Q  GH    L+G  T ++GDP+ ++ +R  +  +++
Sbjct: 38  LGADPTAPDIHLGHTVILNKLRTFQDLGHDVTFLIGDFTGMVGDPTGKNTTRPPLTREDV 97

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
             N +  K      +     K   +  N+E WL  +    ++R + S  +V RML  +  
Sbjct: 98  LRNADTYKQQVFKILDPAKTK---IQFNSE-WLSQLGAEGMIR-LASNQTVARMLERDDF 152

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
           + R    Q ++  EF Y +LQ YD V +    +  +++GG+DQ  N++ G +L +     
Sbjct: 153 KKRYNNGQPIAIHEFMYPLLQGYDSVAM----ETDVELGGTDQKFNLLMGRELQKANGQK 208

Query: 220 KLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               L  PLL    G  KM K+    I +++   +P   +    +I D  + S+ + L+ 
Sbjct: 209 PQVVLMMPLLVGLDGEKKMSKSAHNYIGVSE---APSEMFGKIMSISDDLMWSYYELLSF 265

Query: 279 LPMSEID--RMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM 336
            P+ EI   ++    G    + K ++A EI    H   +A+ A    +  F      + M
Sbjct: 266 RPLEEIAQFKVDVANGTNPRDIKILLAKEIIARFHTEADADAAEQEFINRFQKGAMPEEM 325

Query: 337 PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKL 389
           P       E   G+ +  L+  AG   ST++A R +K  A+K++   + + KL
Sbjct: 326 PEF-----EFDSGIAISNLLKDAGLVASTSDALRMIKQGAVKLDGEKLEDAKL 373


>gi|160901336|ref|YP_001566918.1| tyrosyl-tRNA synthetase [Delftia acidovorans SPH-1]
 gi|160366920|gb|ABX38533.1| tyrosyl-tRNA synthetase [Delftia acidovorans SPH-1]
          Length = 410

 Score =  109 bits (273), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 99/367 (26%), Positives = 170/367 (46%), Gaps = 42/367 (11%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  +  LQ  GH+ I L+G  T++IGDPS R+ +R  + +++I
Sbjct: 53  LGLDPTAPDIHLGHTVVLNKMRQLQDLGHQVIFLIGDFTTLIGDPSGRNSTRPPLTAEQI 112

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           + N E     ++   K        +  N+E W   +    ++ E+ + ++V RM+     
Sbjct: 113 KVNAET---YYTQAAKVLDPARTEVRYNSE-WCDKLGARGMI-ELSAKYTVARMMERNDF 167

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R     S+S  EF Y +LQ YD V L  +    L+MGG+DQ  N++ G  L +     
Sbjct: 168 HQRFTDGSSISLHEFLYPLLQGYDSVALRAD----LEMGGTDQKFNLLMGRHLQQEYGQD 223

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRL-- 276
               LT PLL    G  KM K+ +  I + ++  + +           A V+S +  L  
Sbjct: 224 TQCVLTMPLLVGLDGEHKMSKSKNNYIGITEDANTMF-----------AKVLSISDTLMW 272

Query: 277 ---TTLPMSEIDRMAKLQ-----GKEINEAKKIIATEITTMVHGREEAEKAATAAMECFD 328
              T L    +  +A L+     G+   +AK ++A EIT   H        + A  +  +
Sbjct: 273 NWYTLLSFKSLAEIAALKAEVEGGRNPKDAKVLLAKEITARFH--------SAALADAAE 324

Query: 329 MSIHSQHMPTISISKDEVS---RGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIIS 385
              +++    I    DEVS     +G+  L+ +A  A ST+EA R +    ++++ + IS
Sbjct: 325 QDFNNRSKGGIPDQIDEVSLSGAPLGIGALLKQANLAPSTSEANRLIDGGGVRVDGTAIS 384

Query: 386 NEKLQIK 392
           +  L+++
Sbjct: 385 DRGLKLE 391


>gi|78486288|ref|YP_392213.1| tyrosyl-tRNA synthetase [Thiomicrospira crunogena XCL-2]
 gi|115305828|sp|Q31E84|SYY_THICR RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|78364574|gb|ABB42539.1| tyrosyl-tRNA synthetase [Thiomicrospira crunogena XCL-2]
          Length = 398

 Score =  109 bits (273), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 98/385 (25%), Positives = 173/385 (44%), Gaps = 29/385 (7%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           IL E+  I ++   + L I           G+D TA  LH GH   +  L   Q  GH+ 
Sbjct: 19  ILVEKELIEKLKKGKPLKIKA---------GFDPTAPDLHLGHTVLINKLRQFQDLGHEI 69

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           + L+G  T++IGDP+ +  +R  +  +++ +N E  K     F      KT  +   N  
Sbjct: 70  LFLIGDFTAMIGDPTGKSATRPPLSEEDVLKNAETYKE--QVFKILDPAKTKVVF--NSE 125

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           W+  +   D+++  G+  +V RML       R +    ++  EF Y ++Q YD V L   
Sbjct: 126 WMSKLSAADMIKLAGT-TTVARMLERNDFGERYQSNTPIAIHEFLYPLVQGYDSVAL--- 181

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNK 249
            D  +++GG+DQ  N++ G  L +         LT P+L    G  KM K+L+  I +  
Sbjct: 182 -DSDIELGGTDQKFNLLMGRTLQQHYGKEAQCTLTMPILEGLDGVQKMSKSLNNYIGIK- 239

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEIT 307
              +P + +    ++ D  +  + + L+   +  I   + A   G+     K  +A E+ 
Sbjct: 240 --DAPNDMFGKVMSVSDELMWRYFELLSFESLETIAGYKDAVANGENPRNIKIKLALELI 297

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
              H +E AE A       F  +     MP  +   +EV   M L  L+ +AG  +ST++
Sbjct: 298 ERFHDKESAEAALKDFETRFSKNAIPDEMPEFTF--NEV---MPLANLLKEAGLVSSTSD 352

Query: 368 ARRHLKSNAIKINNSIISNEKLQIK 392
             R +K  A+K+N   +++ +  ++
Sbjct: 353 GHRMVKQGAVKLNGEKVTDSRAPVE 377


>gi|294648689|ref|ZP_06726150.1| tyrosine--tRNA ligase [Acinetobacter haemolyticus ATCC 19194]
 gi|292825419|gb|EFF84161.1| tyrosine--tRNA ligase [Acinetobacter haemolyticus ATCC 19194]
          Length = 410

 Score =  109 bits (272), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 96/386 (24%), Positives = 170/386 (44%), Gaps = 42/386 (10%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           I+SE   + ++   R L +           G+D TA  LH GH   +  L   Q  GH+ 
Sbjct: 27  IISEEDLLKKLKENRPLRVKA---------GFDPTAPDLHLGHTVLINKLKTFQDLGHEV 77

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEI-------QENIEKIKGIFSSFIKYGTGKTDA 123
             L+G  T++IGDPS +  +R  +  +++       QE + KI     + +++       
Sbjct: 78  TFLIGDYTAMIGDPSGKSATRPPLSKEQVLANAKTYQEQVFKILDPNKTKVRF------- 130

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
               N  W       DL+ ++ S  +V+RML  +    R    Q ++  EF Y ++Q YD
Sbjct: 131 ----NSEWFNQRTAADLI-QLASQQTVSRMLERDDFTKRYNNHQPIAIHEFLYPLVQGYD 185

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLS 242
            + L    +  +++GG+DQ  N++ G  L  R        +T P+L    G  KM K+L 
Sbjct: 186 SIAL----EADVELGGTDQTFNLLMGRTLQGRYGQESQVCITVPILEGLDGVNKMSKSLG 241

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI----DRMAKLQGKEINEA 298
             I +     +P   +Q   ++ D+ +  +   L+   + EI    D MA   G+   E 
Sbjct: 242 NYIGV---FDTPGAMYQKILSMPDSLIERYFDLLSFKSLDEIKILLDEMAA--GRNPQEI 296

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVK 358
           K+I+A E+    H  E AE A  +A          +  P + IS+ E    + + T++  
Sbjct: 297 KRILALELVERFHDAEAAENAHKSAGNRVTEGEVPEDTPEVIISRGEFGGELFIATILRV 356

Query: 359 AGFATSTNEARRHLKSNAIKINNSII 384
           AG   +   A+  +   A+K++ +++
Sbjct: 357 AGLNPNAASAKDAVGRGAVKVDWNVV 382


>gi|149642027|ref|XP_001514884.1| PREDICTED: hypothetical protein [Ornithorhynchus anatinus]
          Length = 302

 Score =  109 bits (272), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 53/154 (34%), Positives = 85/154 (55%), Gaps = 2/154 (1%)

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK 239
           +A +   +   Y CR+Q+GG DQ GNI  G +   ++    +F +T PL+T+ +G K+GK
Sbjct: 50  EAPEVXVVDSRYGCRVQLGGHDQLGNIQSGYEFVRKVTGKDVFGITVPLITSTTGAKLGK 109

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE-- 297
           +   A+WLN++ TSP+  +Q++    D  V  + K  T LP+ EID + K+  KE  +  
Sbjct: 110 SAGNAVWLNRDKTSPFELYQFFVRQQDDCVERYLKLFTFLPLPEIDHIMKMHAKEPEKRG 169

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSI 331
            +K +A E+T  VHG E  E A       +  S+
Sbjct: 170 PQKRLAAEVTKFVHGPEGLESAKRCTQAIYHSSV 203


>gi|78049566|ref|YP_365741.1| tyrosyl-tRNA synthetase [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
 gi|115305831|sp|Q3BNC2|SYY_XANC5 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|78037996|emb|CAJ25741.1| tyrosyl-tRNA synthetase [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
          Length = 403

 Score =  109 bits (272), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 99/357 (27%), Positives = 163/357 (45%), Gaps = 31/357 (8%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   L  +   Q+ GH+ I L+G  T +IGDPS ++ +R+ +  +++ 
Sbjct: 39  GFDPTAPDLHLGHTVLLNKMRQFQQLGHQVIFLIGDFTGMIGDPSGKNATRKPLSREDVL 98

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
            N    +       K    +   +  N+E W   +   D+++ + +  +V RML  +   
Sbjct: 99  ANARTYE---EQVFKILDRERTEVRFNSE-WFGQMSAADMIK-LSAQHTVARMLERDDFA 153

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R   +Q ++  EF Y ++Q YD V L  +    +++GG+DQ  N++ G  L E      
Sbjct: 154 KRFGSQQPIAIHEFLYPLVQGYDSVALKAD----VELGGTDQKFNLLMGRGLQEHYGQAP 209

Query: 221 LFALTSPLLTTASGT-KMGKTLSGAIWLNKEM------TSPYNFWQYWRNIDDADVVSFA 273
              LT PLL    G  KM K+L   I +N+        T        WR I   D++SF 
Sbjct: 210 QIVLTMPLLEGLDGVAKMSKSLGNYIGINEPAIDIVTKTMKIGDELTWRWI---DLLSF- 265

Query: 274 KRLTTLPMSEIDRM-AKLQGKEIN--EAKKIIATEITTMVHGREEAEKAATAAMECFDMS 330
                + ++E  R+  ++   E++  E K  +A E+ T  H    AE+A           
Sbjct: 266 ----DISLAEAARLKEQVAAGELHPREVKLRLARELATRFHDAATAEQAIAGWHAVVTGQ 321

Query: 331 IHSQHMPTIS-ISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISN 386
             +  +P    +  DE  R  GLLT    AG   S +EA R LK  A++I+  ++ +
Sbjct: 322 GDTSLLPLQEVVVPDEGLRLAGLLT---AAGLTPSNSEATRKLKERAVRIDGEVVED 375


>gi|134302006|ref|YP_001121975.1| tyrosyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           WY96-3418]
 gi|134049783|gb|ABO46854.1| tyrosyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           WY96-3418]
          Length = 406

 Score =  109 bits (272), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 99/360 (27%), Positives = 172/360 (47%), Gaps = 36/360 (10%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G D TA  +H GH   +  L  LQ  GH+   L+G  T+ IGDP+ ++ +R  + ++E+ 
Sbjct: 49  GCDPTAPDIHLGHTVVINKLKQLQDLGHEIHFLIGDFTAQIGDPTGKNATRPPLTAEEVA 108

Query: 101 ENIEK-IKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
            N E   K +F    K  T     ++  N  W   +   ++++ + S  +V RML  +  
Sbjct: 109 ANAETYTKQVFKILDKDKT-----VIRRNGDWFNKMSASEMIK-LASKSTVARMLERDDF 162

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R K  QS+S  EF Y ++Q YD V  A N D  +++GG+DQ  N++ G +L ++    
Sbjct: 163 SKRYKGGQSISIHEFLYPLVQGYDSV--AMNAD--IELGGTDQKFNLLMGRELQKQQGQE 218

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYN---------FWQYWRNIDDADV 269
               +T PLL    G  KM K+    I + +     +           W+Y+      ++
Sbjct: 219 PQVIITMPLLEGLDGVKKMSKSSQNYIGIEEPANEIFGKIMSISDELMWRYY------EL 272

Query: 270 VSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDM 329
           +SF K L  +   + D  A    ++I   K  +A E+    H +E+AE    +A + F  
Sbjct: 273 LSF-KSLENIAKLKQDVAAGANPRDI---KIELAKELIERFHSKEDAE----SAHQDFIQ 324

Query: 330 SIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKL 389
                 +P   I+  E+++ + +  L+ +AG   ST+EA R ++  A+KI+   +S+ K+
Sbjct: 325 RFQKNQIPD-DINVVELNQELPIANLLKEAGLVASTSEANRMIQQGAVKIDGEKLSDAKI 383


>gi|121603419|ref|YP_980748.1| tyrosyl-tRNA synthetase [Polaromonas naphthalenivorans CJ2]
 gi|120592388|gb|ABM35827.1| tyrosyl-tRNA synthetase [Polaromonas naphthalenivorans CJ2]
          Length = 410

 Score =  109 bits (272), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 104/376 (27%), Positives = 177/376 (47%), Gaps = 32/376 (8%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  +  LQ  GH  I L+G  TS+IGDPS R+ +R  +  ++I
Sbjct: 53  LGLDPTAPDIHIGHTVVLNKMRQLQDLGHTVIFLIGDFTSLIGDPSGRNSTRPPLTPEQI 112

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           + N E      S  +     KT+  +  N  W C       + ++ S ++V RM+     
Sbjct: 113 KVNAETYYRQASLVLD--PAKTE--IRYNSEW-CDPLGARGMIQLASRYTVARMMERNDF 167

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R K  QS+S  EF Y ++Q YD V L  +    L++GG+DQ  N++ G  L +     
Sbjct: 168 HDRFKAGQSISVHEFLYPLMQGYDSVALKSD----LELGGTDQKFNLLMGRHLQQEYGQE 223

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               LT PLL    G  KM K+ +  I ++++  S      + + +  +DV+ + K  T 
Sbjct: 224 PQCILTMPLLEGLDGIEKMSKSKNNYIGISEDANS-----MFAKVLSISDVLMW-KWYTL 277

Query: 279 LPMSEIDRMAKLQ-----GKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS 333
           L       +A L+     G+   +AK  +A EIT   H    A+ A    +      +  
Sbjct: 278 LSFKSEADIAALKAEIEAGRNPKDAKVALAKEITARFHSAAAADAAEQDFINRSKGGVPD 337

Query: 334 QHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL 393
           + +P +S+S       +G+  L+  AG A S +EA R +    +++++S++S++ L++  
Sbjct: 338 E-IPDVSLS----GAPLGIGALLKAAGLAPSGSEASRLIDGGGVRVDSSVVSDKALKL-- 390

Query: 394 QDFDSTGNIKLSFGKK 409
               + G   +  GK+
Sbjct: 391 ----AAGTYVVQVGKR 402


>gi|317484756|ref|ZP_07943656.1| tyrosyl-tRNA synthetase [Bilophila wadsworthia 3_1_6]
 gi|316924008|gb|EFV45194.1| tyrosyl-tRNA synthetase [Bilophila wadsworthia 3_1_6]
          Length = 398

 Score =  109 bits (272), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 97/391 (24%), Positives = 165/391 (42%), Gaps = 45/391 (11%)

Query: 36  VTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMR 95
           +T   G+D TA  LH GH   +  L   Q+ GH+ + L+G  T  IGDPS R  +R  + 
Sbjct: 34  LTVKAGFDPTAPDLHLGHTVLIHKLRHFQELGHRVVFLIGDFTGRIGDPSGRSATRPPLT 93

Query: 96  SQEIQENIEKIK-GIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRML 154
           ++++  N E  K  +F       T     ++  N  WL      D +R +GS +++ RM+
Sbjct: 94  TEQVIANAETYKEQVFKILDPEKT-----VVEFNSRWLNDFTAADFIR-LGSRYTLARMM 147

Query: 155 SFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
             +    R +    ++  E  Y ++Q YD V L  +    ++MGG+DQ  N++ G  L  
Sbjct: 148 ERDDFAKRYRENTPIALHELLYPLMQGYDSVALKAD----VEMGGTDQTFNLLVGRTLMG 203

Query: 215 RLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYN---------FWQYWRNI 264
           +        LT PLL    G  KM K+    I +N+     +           W+Y+  I
Sbjct: 204 QYDLEPQCILTVPLLEGLDGVRKMSKSYGNYIGINEPAADQFGKAMSVSDDLMWRYYELI 263

Query: 265 DDA---DVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAAT 321
                 D+ +  K +            +L  K   +AK+ +A EI    HG ++A++A  
Sbjct: 264 SSKSLDDIAALKKDVEE---------GRLHPK---KAKEALAYEIVARYHGEDQAQEALQ 311

Query: 322 AAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINN 381
                F         P  +    E S+    LT    +G A S  EA+R +K  ++ ++ 
Sbjct: 312 GFNSVFADGGIPDDAPEFACEHGEASKPPVFLT---DSGLAASRGEAKRLIKQGSLSLDG 368

Query: 382 SIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
               + +  ++       G+  +  GKK  +
Sbjct: 369 ERCDDAETPLE------PGSYVVKLGKKRFL 393


>gi|261250298|ref|ZP_05942874.1| tyrosyl-tRNA synthetase [Vibrio orientalis CIP 102891]
 gi|260939414|gb|EEX95400.1| tyrosyl-tRNA synthetase [Vibrio orientalis CIP 102891]
          Length = 395

 Score =  109 bits (272), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 93/353 (26%), Positives = 163/353 (46%), Gaps = 20/353 (5%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  L   Q+ GH    L+G  T ++GDP+ ++ +R  +  +++
Sbjct: 38  LGADPTAPDIHLGHTVILNKLRAFQELGHDVTFLIGDFTGMVGDPTGKNTTRPPLTREDV 97

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
             N E  K      +     K   +  N+E WL  +    ++R + +  +V RML  +  
Sbjct: 98  LRNAETYKEQVFKILDPAKTK---IQFNSE-WLSELGAEGMIR-LAANQTVARMLERDDF 152

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
           + R    Q ++  EF Y +LQ YD V +    +  +++GG+DQ  N++ G +L +     
Sbjct: 153 KKRYTGGQPIAIHEFMYPLLQGYDSVAM----ETDVELGGTDQKFNLLMGRELQKAHGQK 208

Query: 220 KLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               LT PLL    G  KM K+    I +++   +P   +    +I D  + S+ + L+ 
Sbjct: 209 PQVVLTMPLLVGLDGEKKMSKSAHNYIGVSE---APSEMFGKIMSISDDLMWSYYELLSF 265

Query: 279 LPMSEIDRM-AKLQ-GKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM 336
            P+ EI  + A ++ GK   + K  +A EI    H   +A+ A    +  F  +     M
Sbjct: 266 RPLEEIAELKAGVEAGKNPRDVKVALAKEIIARFHTEADADAAEQEFVNRFAKNQIPDEM 325

Query: 337 PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKL 389
           P           G+ +  ++ +AG   ST+EA R +K  A KI+   +++ K 
Sbjct: 326 PEFDFDA-----GLPVSNILKEAGLCASTSEAMRMVKQGAAKIDGEKVADSKF 373


>gi|188578877|ref|YP_001915806.1| tyrosyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|188523329|gb|ACD61274.1| tyrosyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae PXO99A]
          Length = 403

 Score =  109 bits (272), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 99/384 (25%), Positives = 171/384 (44%), Gaps = 42/384 (10%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   L  +   Q+ GH+ I L+G  T +IGDPS ++ +R+ +  +++ 
Sbjct: 39  GFDPTAPDLHLGHTVLLNKMRQFQQLGHQVIFLIGDFTGMIGDPSGKNATRKPLSREDVL 98

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
            N    +       K    +   +  N+E W   +  +D+++ + +  +V RML  +   
Sbjct: 99  ANARTYE---EQVFKILDRERTEVRFNSE-WFGQMSAVDMIK-LSAQHTVARMLERDDFA 153

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R   +Q ++  EF Y ++Q YD V L  +    +++GG+DQ  N++ G  L E      
Sbjct: 154 KRFGSQQPIAIHEFLYPLVQGYDSVALRAD----VELGGTDQKFNLLMGRGLQEHYGQAP 209

Query: 221 LFALTSPLLTTASGT-KMGKTLSGAIWLNKEM------TSPYNFWQYWRNID-------D 266
              LT PLL    G  KM K+L   I +N+        T        WR ID        
Sbjct: 210 QIVLTMPLLEGLDGVAKMSKSLGNYIGINEPAIDIVTKTMKIGDELTWRWIDLLSLDISV 269

Query: 267 ADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMEC 326
           A+ V   +++T+          +L  +E+   K  +A E+ T  H    AE+A       
Sbjct: 270 AEAVRLKEQVTS---------GELHPREV---KLRLARELATRFHDAATAEQAIAGWHAV 317

Query: 327 FDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISN 386
                 +  +P   +     + G+ + +L+  AG   S +EA R LK  A+KI+  ++ +
Sbjct: 318 VTGQGDTSLLPLQEVVVP--AEGLRIASLLTAAGLTPSNSEATRKLKERAVKIDGEVLED 375

Query: 387 EKLQIKLQDFDSTGNIKLSFGKKN 410
              ++  Q F+      +  GK+N
Sbjct: 376 AT-RVFTQGFEGV----IQVGKRN 394


>gi|330812094|ref|YP_004356556.1| tyrosyl-tRNA synthetase [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327380202|gb|AEA71552.1| tyrosyl-tRNA synthetase [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 399

 Score =  109 bits (272), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 98/348 (28%), Positives = 156/348 (44%), Gaps = 18/348 (5%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   +  L   Q  GH+ I L+G  T +IGDPS +  +R  +  +++ 
Sbjct: 39  GFDPTAPDLHLGHTVLINKLRQFQDLGHQVIFLIGDFTGMIGDPSGKSATRPPLTREQVL 98

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           +N E  K     F      KT+     N TW+  +   D +R + S ++V RML  +   
Sbjct: 99  DNAETYK--TQVFKILDPAKTEVAF--NSTWMDQMGPADFIR-LTSQYTVARMLERDDFD 153

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R K  Q ++  EF Y ++Q YD V L  +    +++GG+DQ  N++ G +L        
Sbjct: 154 KRYKSNQPIAIHEFLYPLVQGYDSVALRAD----VELGGTDQKFNLLMGRELQRGYGQEA 209

Query: 221 LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTL 279
              LT PLL    G  KM K+L   + + +   +P   +    +I D  +  + + L+  
Sbjct: 210 QCILTMPLLEGLDGVKKMSKSLGNYVGIQE---APGVMYSKLVSIPDVLMWRYFELLSFR 266

Query: 280 PMSEID--RMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMP 337
            M EI+  R     G    + K  +A EI    HG E A  A  AA            +P
Sbjct: 267 SMDEINAFRADVEAGANPRDIKIKLAEEIVARFHGEEAAASAHRAAGNRMKDGELPDDLP 326

Query: 338 TISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIIS 385
            I ++  E    M +  ++ KAG   +   AR  L S  ++I+  ++ 
Sbjct: 327 EIELTAAE---DMPIAAVLNKAGLVKNAAVARDLLGSGGVRIDGEVVD 371


>gi|258625586|ref|ZP_05720472.1| tyrosyl-tRNA synthetase [Vibrio mimicus VM603]
 gi|258582139|gb|EEW07002.1| tyrosyl-tRNA synthetase [Vibrio mimicus VM603]
          Length = 395

 Score =  109 bits (272), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 91/353 (25%), Positives = 160/353 (45%), Gaps = 20/353 (5%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  L   Q  GH    L+G  T ++GDP+ ++ +R  +  +++
Sbjct: 38  LGADPTAPDIHLGHTVILNKLRTFQDLGHDVTFLIGDFTGMVGDPTGKNTTRPPLTREDV 97

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
             N E  K      +     K   +  N+E WL  +    ++R + S  +V RML  +  
Sbjct: 98  LRNAETYKQQVFKILDPAKTK---IQFNSE-WLSQLGAEGMIR-LASNQTVARMLERDDF 152

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
           + R    Q ++  EF Y +LQ YD V +    +  +++GG+DQ  N++ G +L +     
Sbjct: 153 KKRYNNGQPIAIHEFMYPLLQGYDSVAM----ETDVELGGTDQKFNLLMGRELQKANGQK 208

Query: 220 KLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               L  PLL    G  KM K+    I +++   +P   +    +I D  + S+ + L+ 
Sbjct: 209 PQVVLMMPLLVGLDGEKKMSKSAHNYIGVSE---APSEMFGKIMSISDELMWSYYELLSF 265

Query: 279 LPMSEID--RMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM 336
            P+ EI   ++    G    + K ++A EI    H   +A+ A    +  F      + +
Sbjct: 266 RPLEEIAQFKVDVANGTNPRDIKILLAKEIIARFHTEADADAAEQEFINRFQKGAMPEEI 325

Query: 337 PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKL 389
           P       E   G+ +  L+  AG   ST++A R +K  A+K++   + + KL
Sbjct: 326 PEF-----EFDSGIAISNLLKDAGLVASTSDALRMIKQGAVKLDGEKLEDAKL 373


>gi|299537706|ref|ZP_07050995.1| tyrosyl-tRNA synthetase 2 [Lysinibacillus fusiformis ZC1]
 gi|298726685|gb|EFI67271.1| tyrosyl-tRNA synthetase 2 [Lysinibacillus fusiformis ZC1]
          Length = 404

 Score =  109 bits (272), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 101/384 (26%), Positives = 178/384 (46%), Gaps = 27/384 (7%)

Query: 32  SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESR 91
            Q  +T  +G D +A  +H GH   L  +  +Q  GH  + ++G  T  IGDP+ + + R
Sbjct: 35  EQRPLTIKLGLDPSAPDIHLGHAVVLRKIKQMQDLGHHAVIVIGDFTGRIGDPTGKAKGR 94

Query: 92  RMMRSQEIQENIEKI-KGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSV 150
             +    +++N +   + IF         KT      N  WL  + + ++++ + +  SV
Sbjct: 95  TALNDDTVKKNGQTYCEQIFKVL---DPNKTTVRF--NSEWLAKLSFEEVIK-LAATTSV 148

Query: 151 NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGI 210
            R+L  E  + R ++   +   EF Y ++QAYD VEL  +    +++GG+DQ  NI+ G 
Sbjct: 149 ARLLEREDFQKRYQQHIPIGIHEFFYPLMQAYDSVELVAD----IELGGTDQTFNILMGR 204

Query: 211 DLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADV 269
            L +     K  A+  PLL    G  KM K+L   I +N+   +P   ++    + D  +
Sbjct: 205 SLQKHRGLEKQIAIFMPLLEGLDGIEKMSKSLGNYIGINE---APEIMFKKVMEVPDTLI 261

Query: 270 VSFAKRLT---TLPMSEI-DRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAME 325
           + + +  T    L +  I DR+ K  G+   + K ++A  ITT+ HG    E+A      
Sbjct: 262 IKYFELATDEHPLHVQAIQDRLQK--GENPRDLKFLLAEIITTLYHGSTAMEEARAYFEA 319

Query: 326 CFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIIS 385
            F      +++P + +  D+  R M ++  +V  GF  S +E  R +K   + +N   ++
Sbjct: 320 AFQKKEIPKNIPILLLEIDK-ERIMDIIPQLVVMGFIQSKSEFLRLIKQKGVSLNGEKMA 378

Query: 386 NEKLQIKLQDFDSTGNIKLSFGKK 409
            + L   L + D      L  GKK
Sbjct: 379 MDDLSQVLMNNDI-----LQIGKK 397


>gi|52079102|ref|YP_077893.1| tyrosyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|52784468|ref|YP_090297.1| tyrosyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|319647125|ref|ZP_08001350.1| tyrosyl-tRNA synthetase 2 [Bacillus sp. BT1B_CT2]
 gi|81666957|sp|Q65MW0|SYY2_BACLD RecName: Full=Tyrosyl-tRNA synthetase 2; AltName:
           Full=Tyrosine--tRNA ligase 2; Short=TyrRS 2
 gi|52002313|gb|AAU22255.1| tyrosyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|52346970|gb|AAU39604.1| TyrZ [Bacillus licheniformis ATCC 14580]
 gi|317390772|gb|EFV71574.1| tyrosyl-tRNA synthetase 2 [Bacillus sp. BT1B_CT2]
          Length = 417

 Score =  108 bits (271), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 93/382 (24%), Positives = 173/382 (45%), Gaps = 44/382 (11%)

Query: 20  QISNPRELDILCSQGVVTA-----YIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLM 74
           ++  P EL    ++ ++T       +G D +A  +H GH   L  L   Q+ GH    L+
Sbjct: 30  EVIPPEELRAKLAKSILTGEPLKIKLGLDPSAPDVHLGHTVVLNKLRQFQENGHIVQLLI 89

Query: 75  GGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT--GKTDALMLNNETWL 132
           G  T  IGDP+ +  +R+ +  +E++ N E      + F ++G    +    +  N  WL
Sbjct: 90  GDFTGKIGDPTGKSAARKQLTDEEVRRNAE------TYFQQFGKVLDQNKVELHYNSKWL 143

Query: 133 CSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYD 192
             +   D++ E+    +V R++  +    R+  ++ +S  EF Y ++Q YD V L    D
Sbjct: 144 KRLTLEDVI-ELAGKITVARLMERDDFEERIAMQKPISLHEFFYPLMQGYDSVVL----D 198

Query: 193 CRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEM 251
             +++GG+DQ  N++ G    E+    K   +  PLL    G  KM K+ +  I ++++ 
Sbjct: 199 SDIELGGTDQHFNVLMGRHFQEKYGKEKQVVILMPLLEGLDGIEKMSKSKNNYIGIDED- 257

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK-LQGKEIN--EAKKIIATEITT 308
             P+  +    ++ D+ +  +    T L   E  R+ K L+   ++  +AK ++   I  
Sbjct: 258 --PHEMFGKTMSLPDSLMKKYIHLATDLEAEEKKRLVKDLETGAVHPRDAKMLLGKTIVN 315

Query: 309 MVHGREEAEKAATAAMECFDM--------SIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           M HG + AE A     + F          ++H Q   T+ ++            L+V   
Sbjct: 316 MYHGSKAAEAAEQQFKKVFQQNSAPDNITAVHWQGGGTVPVT-----------DLLVTLE 364

Query: 361 FATSTNEARRHLKSNAIKINNS 382
              S +EARR +++  +KIN +
Sbjct: 365 LLPSKSEARRMIQNGGVKINGA 386


>gi|294625179|ref|ZP_06703821.1| tyrosyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
 gi|292600498|gb|EFF44593.1| tyrosyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
          Length = 404

 Score =  108 bits (271), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 103/398 (25%), Positives = 177/398 (44%), Gaps = 48/398 (12%)

Query: 30  LCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDE 89
           L S   +    G+D TA  LH GH   L  +   Q+ GH+ I L+G  T +IGDPS ++ 
Sbjct: 28  LASGKPLRVKAGFDPTAPDLHLGHTVLLNKMRQFQQLGHQVIFLIGDFTGMIGDPSGKNA 87

Query: 90  SRRMMRSQEI-------QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLR 142
           +R+ +  +++       +E + KI     + +++           N  W   +   D+++
Sbjct: 88  TRKPLSREDVLVNARTYEEQVFKILDRERTEVRF-----------NSEWFGQMSAADMIK 136

Query: 143 EIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQ 202
            + +  +V RML  +    R   +Q ++  EF Y ++Q YD V L  +    +++GG+DQ
Sbjct: 137 -LSAQHTVARMLERDDFAKRFGSQQPIAIHEFLYPLVQGYDSVALKAD----VELGGTDQ 191

Query: 203 WGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEM------TSPY 255
             N++ G  L E         LT PLL    G  KM K+L   I +N+        T   
Sbjct: 192 KFNLLMGRGLQEHYGQAPQIVLTMPLLEGLDGVAKMSKSLGNYIGINEPAIDIVTKTMKI 251

Query: 256 NFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA-KLQGKEIN--EAKKIIATEITTMVHG 312
                WR I   D++SF      + ++E  R+  ++   E++  E K  +A E+ T  H 
Sbjct: 252 GDALTWRWI---DLLSF-----DISLAEAARLKEQVASGELHPREVKLRLARELATRFHD 303

Query: 313 REEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHL 372
              AE+A             +  +P   +     + G+ L  L+  AG   S +EA R L
Sbjct: 304 AATAEQAIAGWHAVVTGQGDTSLLPLQEVVVP--AEGLRLAGLLTAAGLTPSNSEATRKL 361

Query: 373 KSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
           K  A+KI+  ++ +   ++  Q F+      +  GK+N
Sbjct: 362 KERAVKIDGEVVEDLS-RVFTQGFEGV----IQVGKRN 394


>gi|118594131|ref|ZP_01551478.1| tyrosyl-tRNA synthetase [Methylophilales bacterium HTCC2181]
 gi|118439909|gb|EAV46536.1| tyrosyl-tRNA synthetase [Methylophilales bacterium HTCC2181]
          Length = 397

 Score =  108 bits (271), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 104/382 (27%), Positives = 174/382 (45%), Gaps = 31/382 (8%)

Query: 10  SILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
            IL E   I ++   R L I           G+D TA  LH GH   L  L  LQ  GH 
Sbjct: 16  EILVEAELIEKLKENRPLRIKA---------GFDPTAPDLHLGHTVLLNKLRQLQDLGHH 66

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKI-KGIFSSFIKYGTGKTDALMLNN 128
            + L+G  T +IGDP+ ++ +R  +  +E+ EN +   K +F    K    KT+ +   N
Sbjct: 67  VMFLIGDFTGMIGDPTGKNTTRPPLTKEEVSENAQSYEKQVFKILDK---NKTEVVF--N 121

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL  +    +L  + +  +V RML  +    R K  Q ++  EF Y +LQ YD V L 
Sbjct: 122 SKWLEPLGAAGMLT-LSARHTVARMLERDDFSKRFKSNQPIAIHEFMYPLLQGYDSVALK 180

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWL 247
            +    +++GG+DQ  N++ G +L ++        +T PLL    G  KM K+L+  I +
Sbjct: 181 AD----IELGGTDQKFNLLMGRELQKQYDQTPQCIITMPLLEGLDGVNKMSKSLNNYIGV 236

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           ++   +    +    +I D  +  + + L+   ++EID   K    ++ E  K I  E  
Sbjct: 237 DEPAET---IFAKILSISDDLMWRYIELLSLKKIAEIDVWRK--RFDLGENPKNIKVEFA 291

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQ---HMPTISISKDEVSRGMGLLTLIVKAGFATS 364
             +  R   EK A +A + F++    +    +P I I     +  + +  L+    F  S
Sbjct: 292 KEIVARFHGEKLADSAEQDFNLRAQGKIPDDIPEIKIQYP--NNKVTVPQLLKHIQFVGS 349

Query: 365 TNEARRHLKSNAIKINNSIISN 386
           T+EA R +K   +K++   I +
Sbjct: 350 TSEAMRLIKGGGVKVDGEKIVD 371


>gi|91789945|ref|YP_550897.1| tyrosyl-tRNA synthetase [Polaromonas sp. JS666]
 gi|91699170|gb|ABE45999.1| tyrosyl-tRNA synthetase [Polaromonas sp. JS666]
          Length = 414

 Score =  108 bits (271), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 99/373 (26%), Positives = 176/373 (47%), Gaps = 22/373 (5%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  +  LQ  GH  I L+G  T++IGDPS R+ +R  +  ++I
Sbjct: 53  LGLDPTAPDIHVGHTVVLNKMRQLQDLGHSVIFLIGDFTTMIGDPSGRNSTRPPLTREQI 112

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           + N +      S  +     +T+  +  N  W   +    ++ ++ S ++V RM+     
Sbjct: 113 EVNAQTYYRQASLVLD--PARTE--IRYNSEWSDPLGARGMI-QLASRYTVARMMERNDF 167

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R K  QS+S  EF Y ++Q YD V L  +    L++GG+DQ  N++ G  L       
Sbjct: 168 HDRFKAGQSISVHEFLYPLMQGYDSVALKSD----LELGGTDQKFNLLMGRHLQVEYGQD 223

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               LT PLL    G  KM K+ +  I ++++  +    +    +I D  +  +   L+ 
Sbjct: 224 PQCVLTMPLLEGLDGIEKMSKSKNNYIGISEDANT---MFAKVLSISDVLMWRWYTLLSF 280

Query: 279 LPMSEID--RMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM 336
              +EI   R   L G+   +AK  +A EIT   H    A+ A    +      +  + +
Sbjct: 281 RSEAEIAALRAEVLAGRNPKDAKVALAKEITARFHSAAAADAAEQDFINRSKGGVPDE-I 339

Query: 337 PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
           P ++++  E    +G+  L+ +AG A S +EA R +    +++++S++S++ L++     
Sbjct: 340 PEVALTLAEGGAPLGIGALLRQAGLAPSGSEANRLIDGGGVRVDSSVVSDKALKL----- 394

Query: 397 DSTGNIKLSFGKK 409
              G   L  GK+
Sbjct: 395 -GAGTYVLQVGKR 406


>gi|313679536|ref|YP_004057275.1| tyrosyl-tRNA synthetase [Oceanithermus profundus DSM 14977]
 gi|313152251|gb|ADR36102.1| tyrosyl-tRNA synthetase [Oceanithermus profundus DSM 14977]
          Length = 435

 Score =  108 bits (271), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 100/395 (25%), Positives = 175/395 (44%), Gaps = 57/395 (14%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D T   LH GH   L  +   Q+ GHK I L+G  T +IGDPS R ++R  +  +E 
Sbjct: 37  LGVDPTRPDLHLGHAVVLRKMRQFQELGHKVILLIGDFTGMIGDPSGRSKTRPPLTLEET 96

Query: 100 QEN----IEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLS 155
           +EN    +E+ + I          +   L  N+E WL  + + +++R I +  +V +ML 
Sbjct: 97  RENARSYVEQARKILRQ-----EPEVFELRYNSE-WLAKLTFEEVIR-IAAQMTVAQMLE 149

Query: 156 FESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER 215
            E  + R      +   EF Y + Q YD V L    +  ++MGG+DQ  N++ G DL + 
Sbjct: 150 REDFKKRYTEGVPIGIHEFLYPLAQGYDSVAL----EADVEMGGTDQKFNLLVGRDLQKF 205

Query: 216 LKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAK 274
                   +  PLL    G  KM K+L   + +++E   P   ++    + DA +  + +
Sbjct: 206 YGQEPQVLVIMPLLVGLDGVEKMSKSLDNYVGVSEE---PAVMFKKLMRVPDAVLADYFR 262

Query: 275 RLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMV-----------------------H 311
            LT L   E++ + +  G  +  A +++A  +T                           
Sbjct: 263 LLTDLEPEEVEAVIEKGG--MVGAHRVLARLLTAAYAQDVIPAWLDRAFYERLGYRFDEA 320

Query: 312 GREEAEK------------AATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVK 358
           GR+EA +             A A  +          +PT++I   E+  G + +  L   
Sbjct: 321 GRDEAPRDPQEAELARTVAQAEARYDEVAKGGVPDDIPTVAIDPSELKDGAIWVARLFTL 380

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL 393
           AG   S  EARR +++  ++++  +I++ +LQ+ L
Sbjct: 381 AGLTQSNGEARRLIQNRGLRLDGEVITDPQLQVTL 415


>gi|28198068|ref|NP_778382.1| tyrosyl-tRNA synthetase [Xylella fastidiosa Temecula1]
 gi|182680696|ref|YP_001828856.1| tyrosyl-tRNA synthetase [Xylella fastidiosa M23]
 gi|81439188|sp|Q87F06|SYY_XYLFT RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|28056128|gb|AAO28031.1| tyrosyl-tRNA synthetase [Xylella fastidiosa Temecula1]
 gi|182630806|gb|ACB91582.1| tyrosyl-tRNA synthetase [Xylella fastidiosa M23]
 gi|307579161|gb|ADN63130.1| tyrosyl-tRNA synthetase [Xylella fastidiosa subsp. fastidiosa
           GB514]
          Length = 418

 Score =  108 bits (271), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 97/385 (25%), Positives = 175/385 (45%), Gaps = 30/385 (7%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D T+  LH GH   L  +   Q  GH+ + L+G  T +IGDP+ ++ +R+ +  +++ 
Sbjct: 39  GFDPTSPDLHLGHTVLLNKMRQFQDLGHQVVFLIGDFTGMIGDPTGKNVTRKPLSREDVL 98

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
            N       +   +     +T   +  N  W   +  +D+++ + +  +V RML  +   
Sbjct: 99  AN----ASTYEDQVFKVLDRTLTEVRFNSEWFEKMSAVDMIK-LAAQHTVARMLERDDFA 153

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R   +Q +   EF Y ++Q YD + L  +    +++GG+DQ  N++ G  L E    P 
Sbjct: 154 KRFASQQPIVIHEFLYPLIQGYDSIALRAD----VELGGTDQKFNLLMGRALQEHHGQPP 209

Query: 221 LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTL 279
              LT PLL    G  KM K+L   I + +    P +       I D D++     L + 
Sbjct: 210 QIVLTMPLLEGLDGVAKMSKSLGNYIGIKE---PPIDIVTKTMKIGD-DLMWRWIELLSF 265

Query: 280 PMSEIDRMA---KLQGKEIN--EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQ 334
            +S  + +A    +   E+N  E K  +A E+ +  +    AEKA            ++ 
Sbjct: 266 KISAAEAVALREAVAKSELNPREVKLRLAHELVSRFYDNAAAEKAIAGWQAVVTGQGNNN 325

Query: 335 HMP--TISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
            +P   I++  D    G+ L+ L+ K+G A S +EA R LK  A++++  ++ +  L   
Sbjct: 326 LLPLQKINVPAD----GVRLVALLTKSGLAPSNSEAMRKLKERAVRVDGIVVDDAHLHF- 380

Query: 393 LQDFDSTGNIKLSFGKKNHIICHLC 417
           +  F+      +  GK+N I   L 
Sbjct: 381 VPGFEGL----IQIGKRNFIKVRLV 401


>gi|170723924|ref|YP_001751612.1| tyrosyl-tRNA synthetase [Pseudomonas putida W619]
 gi|169761927|gb|ACA75243.1| tyrosyl-tRNA synthetase [Pseudomonas putida W619]
          Length = 399

 Score =  108 bits (271), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 93/350 (26%), Positives = 159/350 (45%), Gaps = 18/350 (5%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   +  L   Q+ GH+ + L+G  T +IGDPS +  +R  +  +++ 
Sbjct: 39  GFDPTAPDLHLGHTVLINKLRQFQELGHQVVFLIGDFTGMIGDPSGKSATRPPLTREQVL 98

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           +N E  K     F      KT+     N TW+  +   D +R + S ++V RML  +   
Sbjct: 99  DNAETYKQ--QVFKILDPAKTEVAF--NSTWMDKLTPADFIR-LASQYTVARMLERDDFD 153

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R    Q ++  EF Y ++Q YD V L  +    +++GG+DQ  N++ G +L        
Sbjct: 154 KRYTTNQPIAIHEFLYPLVQGYDSVALKAD----VELGGTDQKFNLLMGRELQRAYGQEA 209

Query: 221 LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTL 279
              +T PLL    G  KM K+L   + + +   +P   +    +I D  +  + + L+  
Sbjct: 210 QCIVTMPLLEGLDGVKKMSKSLGNYVGIQE---APGVMYSKLVSIPDTLMWRYFELLSFR 266

Query: 280 PMSEID--RMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMP 337
            M EI+  R     G    + K  +A EI    HG E A  A  AA          + +P
Sbjct: 267 SMDEIEQFRADVANGANPRDIKIKLAEEIVARFHGEEAAANAHRAAGNRMKEGELPEDLP 326

Query: 338 TISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNE 387
            I ++  E    + +  ++ +AG   ++  AR  L   A+K++  ++  +
Sbjct: 327 EIEVAAAE---DLPIAAVLNRAGLVKNSAMARDLLNGGAVKVDGVVVERD 373


>gi|221069189|ref|ZP_03545294.1| tyrosyl-tRNA synthetase [Comamonas testosteroni KF-1]
 gi|220714212|gb|EED69580.1| tyrosyl-tRNA synthetase [Comamonas testosteroni KF-1]
          Length = 438

 Score =  108 bits (271), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 102/381 (26%), Positives = 170/381 (44%), Gaps = 42/381 (11%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  +  LQ  GH+ I L+G  T++IGDPS R+ +R  + +++I
Sbjct: 81  LGLDPTAPDIHLGHTVVLNKMRQLQDLGHQVIFLIGDFTTLIGDPSGRNSTRPPLTAEQI 140

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           + N E     ++   K        +  N+E W   +    ++ ++ + ++V RM+     
Sbjct: 141 KANAET---YYTQAAKVLDPARTEVRYNSE-WCDQLGARGMI-QLSAKYTVARMMERNDF 195

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
            +R     S+S  EF Y +LQ YD V L  +    L++GG+DQ  N++ G  L       
Sbjct: 196 HTRFTDGSSISLHEFLYPLLQGYDSVALKSD----LELGGTDQKFNLMMGRHLQAEYGQE 251

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRL-- 276
           +   LT PLL    G  KM K+ +  I + ++  + +           A V+S +  L  
Sbjct: 252 QQCVLTMPLLVGLDGVHKMSKSKNNYIGITEDANTMF-----------AKVLSISDELMW 300

Query: 277 ---TTLPMSEIDRMAKLQ-----GKEINEAKKIIATEITTMVHGREEAEKAATAAMECFD 328
              T L    +  +A L+     G     AK  +A EIT   H    AE A    +    
Sbjct: 301 DWYTLLSFKSLADIAALKAEIEAGGNPKHAKVALAKEITARFHSAAAAETAEQDFINRSK 360

Query: 329 MSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEK 388
             I    +P I++        +G+  L+ +A  A ST EA R +    ++I+ ++IS+  
Sbjct: 361 GGI-PDDIPEINLP----GAPLGIGALVKQANLAASTGEANRLIDGGGVRIDGNVISDRA 415

Query: 389 LQIKLQDFDSTGNIKLSFGKK 409
           L++        G   L  GK+
Sbjct: 416 LKL------DAGTFVLQVGKR 430


>gi|15836774|ref|NP_297462.1| tyrosyl-tRNA synthetase [Xylella fastidiosa 9a5c]
 gi|81548372|sp|Q9PGX7|SYY_XYLFA RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|9104963|gb|AAF82982.1|AE003870_8 tyrosyl-tRNA synthetase [Xylella fastidiosa 9a5c]
          Length = 418

 Score =  108 bits (271), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 93/358 (25%), Positives = 166/358 (46%), Gaps = 25/358 (6%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   L  +   Q+ GH+ I L+G  T +IGDP+ ++ +R+ +  +++ 
Sbjct: 39  GFDPTAPDLHLGHTVLLNKMRQFQELGHQVIFLIGDFTGMIGDPTGKNVTRKPLSHEDVL 98

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
            N       +   +     +T   +  N  W   +  +D+++ + +  +V RML  +   
Sbjct: 99  ANAR----TYEDQVFKVLDRTLTEVRFNSEWFGKMSAVDMIK-LAAQHTVARMLERDDFA 153

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R   +Q +   EF Y ++Q YD + L  +    +++GG+DQ  N++ G  L E    P 
Sbjct: 154 KRFVSQQPIVIHEFLYPLIQGYDSIALRAD----VELGGTDQKFNLLMGRALQEHHGQPP 209

Query: 221 LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTL 279
              LT PLL    G  KM K+L   I + +    P +       I D D++     L + 
Sbjct: 210 QVVLTMPLLEGLDGVAKMSKSLGNYIGIKE---PPIDIVTKTMKIGD-DLMWRWIELLSF 265

Query: 280 PMSEIDRMA---KLQGKEIN--EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQ 334
            +S  + +A    +   E+N  E K  +A E+ +  +    AEKA            ++ 
Sbjct: 266 KISAAEVVALREAVAKSELNPREVKLRLAHELVSRFYDNAAAEKAIAGWQAVVTGQGNNN 325

Query: 335 HMP--TISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQ 390
            +P   I++  D    G+ L+ L+ K+G A S +EA R LK  A++++  ++ +  L 
Sbjct: 326 LLPLQKINVPAD----GVRLVALLTKSGLAPSNSEAMRKLKERAVRVDGIVVDDAHLH 379


>gi|88807457|ref|ZP_01122969.1| tyrosyl-tRNA synthetase [Synechococcus sp. WH 7805]
 gi|88788671|gb|EAR19826.1| tyrosyl-tRNA synthetase [Synechococcus sp. WH 7805]
          Length = 400

 Score =  108 bits (271), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 100/387 (25%), Positives = 172/387 (44%), Gaps = 45/387 (11%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D T SS+H GH      L   Q  GH  + ++G  T+ IGDP+ + ++R  + ++++
Sbjct: 35  LGIDPTGSSIHLGHSILFRKLRAFQDAGHTAVLIIGDFTARIGDPTGKSDTRVQLTAEQV 94

Query: 100 QENIEKIKGIFSSFIKYGTGKT-DALMLNNET-----------WLCSIKYIDLLREIGSF 147
             N        +   + G G+  D  +L+ ET           WL  +    ++  +G+ 
Sbjct: 95  DANAA------TYLAQLGQGQPKDMALLDFETPGRLEVRRNSEWLEEMDLPAVINLLGT- 147

Query: 148 FSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNII 207
            +V +ML+ +    R      ++  EF Y +LQ YD V  A N D  +++GG+DQ  N+ 
Sbjct: 148 ATVGQMLAKDDFSKRYGSGTPIALHEFLYPLLQGYDSV--AVNAD--VELGGTDQKFNVA 203

Query: 208 CGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDD 266
            G DL         F L  P+L    G  KM K+L   + L ++   P + +     + D
Sbjct: 204 MGRDLQRHFGKGTQFGLLLPILVGLDGVQKMSKSLGNVVGLEED---PLSMYSKLEKVGD 260

Query: 267 ADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAAT-AAME 325
             +  +   LT L ++ +    +       E +K +A  +T   HG   AEKA + AA  
Sbjct: 261 GAINDYVTLLTDLDLAVLPENPR-------EKQKAMALAVTASRHGLAAAEKAQSDAATL 313

Query: 326 CFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIIS 385
                  +  +P  S+  ++V+       L+   G   S++EARR +K  A+++    IS
Sbjct: 314 VGGAGDAAAEVPEASL--EQVNFPAKAFYLLSAVGICASSSEARRQIKGGAVRLEGEKIS 371

Query: 386 NEKLQIKLQDFDSTGNIK---LSFGKK 409
           +       Q+F S   ++   L  GKK
Sbjct: 372 DPN-----QEFASAEELEGKVLQLGKK 393


>gi|220903632|ref|YP_002478944.1| tyrosyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
 gi|219867931|gb|ACL48266.1| tyrosyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
          Length = 398

 Score =  108 bits (270), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 91/352 (25%), Positives = 149/352 (42%), Gaps = 31/352 (8%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G+D TA  LH GH   +  +   Q+ GH  + L+G  T  IGDPS R E+R  +  +++
Sbjct: 38  VGFDPTAPDLHLGHTVVMHKMRHFQELGHHVVFLIGDFTGRIGDPSGRSETRPPLTEEQV 97

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
             N E  K     F      KT+     N  WL  +     ++ + S ++V RM+  +  
Sbjct: 98  LANAETYKK--QVFKILDPAKTEVAF--NSAWLGKLDATGFIK-LASSYTVARMMERDDF 152

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R + ++ +S  EF Y + Q YD V L  +    ++MGG+DQ  N++ G +L       
Sbjct: 153 EKRFREQRPISIHEFLYPLCQGYDSVCLKTD----VEMGGTDQKFNLLVGRNLQAHYGIE 208

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYN---------FWQYWRNIDDADV 269
               LT PLL    G  KM K+    I +++  +  +           W+Y+  +    +
Sbjct: 209 SQCILTMPLLEGTDGVRKMSKSYGNYIGIDEAPSEIFGKIMAISDDLMWRYYELLSTKSL 268

Query: 270 VSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDM 329
              A   T +    +   A         AK+ +A E+ +  H R++A++A       F  
Sbjct: 269 EDIATLKTDVATGTVHPKA---------AKETLAHEMVSRYHSRKDADEAQQGFNAVFAD 319

Query: 330 SIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINN 381
                 MP    +  E S     L     AG   S  EA+R +K  A+ I+ 
Sbjct: 320 GGVPDEMPEHQCAHGEDSTPPVFLE---AAGLVKSRGEAKRLMKEGALSIDG 368


>gi|269468935|gb|EEZ80519.1| Tyrosyl-tRNA synthetase [uncultured SUP05 cluster bacterium]
          Length = 394

 Score =  108 bits (270), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 101/388 (26%), Positives = 174/388 (44%), Gaps = 38/388 (9%)

Query: 14  ERGFIHQISNPRELDI-LCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPIS 72
           ERG  H+I    EL   L     +    G+D TA  LH GH   +  L  LQ  GH+ + 
Sbjct: 11  ERG-AHEILPVDELKKKLAKNKPLRIKAGFDPTAPDLHLGHTVLINKLKQLQDLGHEILF 69

Query: 73  LMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKG-IFSSFIKYGTGKTDALMLNNETW 131
           L+G  T++IGDP+ + ++R  +  +++ +N E  +  +F    K  T      ++ N  W
Sbjct: 70  LIGDFTAMIGDPTGKSKTRPPLSKEQVLKNAESYQDQVFKILDKDKTK-----VVFNSDW 124

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +  +  ++++ ++ S  ++ RML       R K  Q ++  EF Y ++Q  D VEL  + 
Sbjct: 125 IGKMSALEMI-QLASQKTMARMLERNDFSDRYKAGQDIAIHEFLYPLIQGRDSVELKAD- 182

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G DL ++        LT P+L    G  KM K+L   I ++ +
Sbjct: 183 ---VELGGTDQKFNLLMGRDLQKQAGMESQVILTMPILEGLDGVQKMSKSLDNYIGIDDK 239

Query: 251 MTSPYN---------FWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKI 301
               +           W+Y   +    + + A   T +   E  R  K +          
Sbjct: 240 PDDMFGKIMSISDDLMWRYLELLSFETLETIASWKTEVENGENPRNIKFR---------- 289

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGF 361
           +A EI T  H  ++A++A    +  F  +     MP  S        G+ +  L+  +G 
Sbjct: 290 LADEIITRFHSSDDAKQAQQNFINRFAKNKVPDEMPEFSFES-----GIKIANLLKDSGL 344

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKL 389
            +ST++A R +K  A KI    IS+  L
Sbjct: 345 VSSTSDAFRMIKEGAAKIEGEKISDRNL 372


>gi|223039857|ref|ZP_03610141.1| tyrosyl-tRNA synthetase [Campylobacter rectus RM3267]
 gi|222878866|gb|EEF13963.1| tyrosyl-tRNA synthetase [Campylobacter rectus RM3267]
          Length = 402

 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 101/364 (27%), Positives = 172/364 (47%), Gaps = 28/364 (7%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   L  + +LQK G     L+G  T  IGDPS + ++R+ +  + + 
Sbjct: 44  GFDPTAPDLHLGHTVVLQKMAFLQKHGAIVQFLIGDFTGQIGDPSGKSQTRKKLDRETVM 103

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
            N +  +       K    +   LM N+  WL  +    ++ E+ S F+V RML  +   
Sbjct: 104 ANAKTYE---EQVFKILDPQKTKLMFNSR-WLNELGAAGIV-ELASTFAVARMLERDDFE 158

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R K   S+S  EF Y +LQ YD V +     C ++MGG+DQ  N++ G  L       K
Sbjct: 159 KRYKSGASISISEFLYPLLQGYDSVAM----KCDIEMGGTDQKFNLLMGRTLQRIYNVGK 214

Query: 221 LFA-LTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
             A +  PLL    G  KM K+L   I + +    P   +    ++ D  +  + + L+ 
Sbjct: 215 EQAVIMMPLLEGLDGVNKMSKSLGNYIGVTE---GPNEMFAKILSVSDELMWRWYELLSE 271

Query: 279 LPMSEIDRM------AKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIH 332
               +I  +       K   K + EA   +A EITT  +G      AA  A   FD  +H
Sbjct: 272 KSAEKIANLKSDVASGKAHPKAVKEA---LALEITTRYNGE----AAAKEAKAEFD-RVH 323

Query: 333 SQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
           SQ++    + +  ++  + ++  +   G   S+++ARR + +NA+ +N   I++E+L++ 
Sbjct: 324 SQNLIPTEMEEFGLAAPVWIVHALTHCGLCASSSQARRDIAANAVSLNQEKIADEQLKLG 383

Query: 393 LQDF 396
           + ++
Sbjct: 384 VGEY 387


>gi|167627820|ref|YP_001678320.1| tyrosyl-tRNA synthetase [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
 gi|167597821|gb|ABZ87819.1| tyrosyl-tRNA synthetase [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
          Length = 396

 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 99/355 (27%), Positives = 170/355 (47%), Gaps = 28/355 (7%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G D TA  +H GH   +  L  LQ  GH+   L+G  T+ IGDP+ ++ +R  + ++E+ 
Sbjct: 39  GCDPTAPDIHLGHTVVINKLKQLQDLGHEIHFLIGDFTAQIGDPTGKNATRPPLTAEEVA 98

Query: 101 ENIEK-IKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
            N E   K +F    K  T     ++  N  W   +   D+++ + S  +V RML  +  
Sbjct: 99  ANAETYTKQVFKILDKEKT-----VIRRNGDWFDKMSASDMIK-LASKSTVARMLERDDF 152

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R K  QS+S  EF Y ++Q YD V  A N D  +++GG+DQ  N++ G +L ++    
Sbjct: 153 SKRYKGGQSISIHEFLYPLVQGYDSV--AMNAD--IELGGTDQKFNLLMGRELQKQQGQE 208

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               +T PLL    G  KM K+    I + +   +P + +    +I D  +  + + L+ 
Sbjct: 209 PQVIITMPLLEGLDGVKKMSKSSQNYIGIEE---TPNDMFGKVMSISDELMWRYYELLS- 264

Query: 279 LPMSEIDRMAKLQ-----GKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS 333
                +D +A L+     G    + K  +A E+    H +E+AE    +A + F      
Sbjct: 265 --FKSLDTIANLKQDVANGTNPRDIKIELAKELIERFHSKEDAE----SAHQDFIQRFQK 318

Query: 334 QHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEK 388
             +P   I+  E+++ + +  L+ +AG   ST+EA R +K  A+KI+     + K
Sbjct: 319 NQIPD-DINVVELNQELPIANLLKEAGLVASTSEAIRMIKQGAVKIDGEKAEDNK 372


>gi|56751549|ref|YP_172250.1| tyrosyl-tRNA synthetase [Synechococcus elongatus PCC 6301]
 gi|81301379|ref|YP_401587.1| tyrosyl-tRNA synthetase [Synechococcus elongatus PCC 7942]
 gi|81561905|sp|Q5N1U0|SYY_SYNP6 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|115305825|sp|Q31K19|SYY_SYNE7 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|56686508|dbj|BAD79730.1| tyrosyl tRNA synthetase [Synechococcus elongatus PCC 6301]
 gi|81170260|gb|ABB58600.1| tyrosyl-tRNA synthetase [Synechococcus elongatus PCC 7942]
          Length = 402

 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 94/354 (26%), Positives = 166/354 (46%), Gaps = 30/354 (8%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D T S +H GH      L   Q  GH  + ++G  T+ IGDP+ + E RR + ++++
Sbjct: 44  LGIDPTGSDIHLGHSIIFRKLRQFQDAGHTAVLIIGDFTARIGDPTGKSEVRRQLTAEDV 103

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           Q N E         + + T     +  N+E WL  +    +L  +G+  +V +ML+ E  
Sbjct: 104 QRNAETYLDQLRPILDFETPGRLEIRYNSE-WLAGLDLAKILELLGT-MTVGQMLAKEGF 161

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R  +   +   EF Y ++Q YD V +  +    +++GG+DQ  NI  G DL       
Sbjct: 162 SERYDKGTPVYLHEFLYPLMQGYDSVAVQSD----VELGGTDQKFNIAVGRDLQRHFGLQ 217

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
             F L  P+L    G+ KM K+L   + LN++  S Y+  +    + DA V  + + LT+
Sbjct: 218 PQFGLLLPILIGLDGSQKMSKSLGNYVGLNEDALSMYSKLE---KVPDALVADYFELLTS 274

Query: 279 -----LPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMS-IH 332
                LP +  DR            +K++A ++ +  HG E A  A  AA E    S + 
Sbjct: 275 QDLAALPENPRDR------------QKLLALDVVSQYHGAEAAAAAQKAAQELVQGSAVQ 322

Query: 333 SQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISN 386
           ++ +P   +S  +V+       L+   G   +++EARR ++  A++++   + +
Sbjct: 323 AEAVPEFPLS--QVNFPAKAFYLVSAVGLGLTSSEARRQIQGGAVRLDGQKLDD 374


>gi|187933167|ref|YP_001885896.1| tyrosyl-tRNA synthetase [Clostridium botulinum B str. Eklund 17B]
 gi|187721320|gb|ACD22541.1| tyrosine--tRNA ligase [Clostridium botulinum B str. Eklund 17B]
          Length = 404

 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 90/354 (25%), Positives = 166/354 (46%), Gaps = 28/354 (7%)

Query: 36  VTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMR 95
           +T  +G D +A  +H GH   L  +  +Q  GH+ + L+G  T  IGDP+ + ++R+ + 
Sbjct: 39  LTIKLGLDPSAPDIHLGHAVVLRKIKQMQDLGHRAVILIGDFTGKIGDPTGKSKTRKPLT 98

Query: 96  SQEIQEN-IEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRML 154
            +++ EN +   K I     K  T     +  N+E WL  +K+ ++L+ + +  +V RML
Sbjct: 99  QEQVIENAMTYQKQILKVLDKEKT----EIRFNSE-WLSKLKFEEVLK-LAATTTVARML 152

Query: 155 SFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
             +  ++R      +   EF Y ++Q YD + L  +    +++GG+DQ  NI+ G  L +
Sbjct: 153 ERDDFKNRYSNNAPIGIHEFFYPLMQGYDSIVLKAD----IELGGTDQTFNILMGRTLQK 208

Query: 215 RLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFA 273
            +   +  A+  P+L    G  KM K+L   I ++++       ++    + D  ++ + 
Sbjct: 209 GMGMEQQIAIFMPILEGLDGVEKMSKSLGNYIGVDEQSEV---MFKKIMEVPDNLIIKYF 265

Query: 274 KRLTTLPMSEIDRMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSI 331
           +  T      ID +      GK   + K  +A  IT++ H  EE + A     + F    
Sbjct: 266 ELATDEHPDRIDEIKNDLENGKNPRDIKLELAKIITSLYHSEEETKAAIEYYEQVFKNGC 325

Query: 332 HSQHMPTISISKD-----EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKIN 380
               +P I+I K+     E+SR      ++V  G   S  E RR ++   ++IN
Sbjct: 326 LPSEVPEINIPKEFLKLKEISR------ILVDEGLVPSNKEFRRLVEQGGVQIN 373


>gi|312884002|ref|ZP_07743719.1| tyrosyl-tRNA synthetase [Vibrio caribbenthicus ATCC BAA-2122]
 gi|309368460|gb|EFP95995.1| tyrosyl-tRNA synthetase [Vibrio caribbenthicus ATCC BAA-2122]
          Length = 395

 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 92/353 (26%), Positives = 166/353 (47%), Gaps = 20/353 (5%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH      L   Q+ GH+   L+G  T+++GDP+ ++ +R  +  +++
Sbjct: 38  LGADPTAPDIHLGHTVIFNKLRLFQELGHEVTFLIGDFTAMVGDPTGKNSTRPPLSREDV 97

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
            +N E  K       K        +  N+E WL  +    ++R + +  +V RML  +  
Sbjct: 98  LKNAETYK---EQVFKILDPNKTKIQFNSE-WLSELGAEGMIR-LAANQTVARMLERDDF 152

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
           + R    Q ++  EF Y +LQ +D V +    +  +++GG+DQ  N++ G +L +     
Sbjct: 153 KKRYSGGQPIAIHEFMYPLLQGWDSVAM----ETDVELGGTDQKFNLLMGRELQKSNGQK 208

Query: 220 KLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               L  PLL    G  KM K+ +  I +++   +P   +    +I D  +  +   L+ 
Sbjct: 209 PQVVLMMPLLVGLDGEKKMSKSANNYIGISE---APSEMFGKIMSISDDLMWDYYDLLSF 265

Query: 279 LPMSEI-DRMAKL-QGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM 336
            P+SEI D  A + QG+   + K ++A EI    H   +A+ A    +  F  +   + M
Sbjct: 266 RPLSEIADLKASIAQGQNPRDVKVLLAKEIIARFHSEVDADAAEQEFVNRFAKNQIPEEM 325

Query: 337 PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKL 389
           P  +      + G  +  L+  AG  +ST+EA R +K  A KI+   +++ K 
Sbjct: 326 PEFNF-----TLGTPVSNLLKDAGLCSSTSEAMRMVKQGAAKIDGEKVADAKF 373


>gi|297171169|gb|ADI22179.1| tyrosyl-tRNA synthetase [uncultured gamma proteobacterium
           HF0200_24F15]
          Length = 401

 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 93/361 (25%), Positives = 164/361 (45%), Gaps = 21/361 (5%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G+D TA  LH GH   +  +   Q  GH+ I L+G  T +IGDPS +  +R  +   EI
Sbjct: 40  VGFDPTAPDLHLGHTVIVNKMRQFQDLGHEIIFLIGDFTGMIGDPSGKSVTRPPLSRDEI 99

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           ++N E  +      +     + +     N  W   +    ++R  G  +++ R++  +  
Sbjct: 100 EKNAETYREQVFKILDRQMTRIEF----NSRWGNELGAEGIIRLAGR-YTMARIMERDDF 154

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
            +R +  + +   E  Y ++Q YD V L    +  +++GG+DQ  N++ G +L ++    
Sbjct: 155 STRYESGEPIGIHELLYPLMQGYDSVAL----EADVELGGTDQKFNLLVGRELQKQYSQT 210

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
                T PLL    G  KM K+L   + + +    P   +    +I D  +  +   L+ 
Sbjct: 211 PQVVFTLPLLEGLDGVQKMSKSLGNYVGITE---PPDEMFGKLMSISDELMWRYFDLLSF 267

Query: 279 LPMSEID--RMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQH- 335
             ++E+D  R+    G    + K ++A EI    H   EA++A    +E F       + 
Sbjct: 268 RTLAELDQLRIEVQHGANPRDIKFMLAEEIVRRFHSLREAKRAKEEFVERFQKGAMPANI 327

Query: 336 -MPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
            M  IS    EV     + T+I +AG   ST+EA R L   A++IN   +++   +I L 
Sbjct: 328 EMKIISSKDKEVP----IATVIKEAGLVKSTSEALRMLDQGAVRINGERVTDRDRKIGLG 383

Query: 395 D 395
           D
Sbjct: 384 D 384


>gi|237748967|ref|ZP_04579447.1| tyrosyl-tRNA synthetase [Oxalobacter formigenes OXCC13]
 gi|229380329|gb|EEO30420.1| tyrosyl-tRNA synthetase [Oxalobacter formigenes OXCC13]
          Length = 414

 Score =  108 bits (269), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 100/372 (26%), Positives = 172/372 (46%), Gaps = 44/372 (11%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  LH GH   L  +  LQ  GH  I L+G  TS+IGDPS R+ +R  +  +++
Sbjct: 57  LGLDPTAPDLHLGHTVVLNKMRQLQNLGHVVIFLIGDFTSMIGDPSGRNITRPPLTREQV 116

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           +EN   +     + +     KT+  +  N  W   +    ++ ++ S +++ R++  E  
Sbjct: 117 KEN--AMTYFAQASLVLDPEKTE--IRYNSEWSDKLGAAGMI-QLASQYTLARIMEREDF 171

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
            +R K    +S  E  Y ++Q YD V L  +    L++GG+DQ  N++ G +L       
Sbjct: 172 ANRFKNGFPISVHELLYPLMQGYDSVALQSD----LELGGTDQKFNLLVGRELQRHYNQE 227

Query: 220 KLFALTSPLL---------TTASGTKMGKTLSGAIWLNKEMT-SPYNFWQYWRNIDDADV 269
               LT PLL         + + G  +G T    I   K M+ S    W+Y+      D+
Sbjct: 228 PQCILTMPLLEGLDGVEKMSKSKGNYVGITEPANIMFGKLMSISDEMMWRYY------DL 281

Query: 270 VSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECF 327
           +SF        + +++R+ +    GK   + K  +  EI T  H    +  AA AA+E F
Sbjct: 282 LSFKS------IQDVERLKEEVKNGKNPRDVKVELGKEIVTRFH----SGAAADAALEDF 331

Query: 328 DMSIH---SQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSII 384
                      +P +S+S       +G+  L+ +AG   ST+EA R +    ++I++  I
Sbjct: 332 VARSRGGIPDDIPAVSLS----GAPLGIGQLLKQAGLCASTSEALRLVDQGGVRIDSQTI 387

Query: 385 SNEKLQIKLQDF 396
           S+  L+++   F
Sbjct: 388 SDRGLKVEAGSF 399


>gi|241668381|ref|ZP_04755959.1| tyrosyl-tRNA synthetase [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254876914|ref|ZP_05249624.1| tyrosyl-tRNA synthetase [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254842935|gb|EET21349.1| tyrosyl-tRNA synthetase [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
          Length = 396

 Score =  108 bits (269), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 98/347 (28%), Positives = 168/347 (48%), Gaps = 28/347 (8%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G D TA  +H GH   +  L  LQ  GH+   L+G  T+ IGDP+ ++ +R  + ++E+ 
Sbjct: 39  GCDPTAPDIHLGHTVVINKLKQLQDLGHEIHFLIGDFTAQIGDPTGKNATRPPLTAEEVA 98

Query: 101 ENIEK-IKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
            N E   K +F    K  T     ++  N  W   +   D+++ + S  +V RML  +  
Sbjct: 99  ANAETYTKQVFKILDKEKT-----VIRRNGDWFDKMSASDMIK-LASKSTVARMLERDDF 152

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R K  QS+S  EF Y ++Q YD V  A N D  +++GG+DQ  N++ G +L ++    
Sbjct: 153 SKRYKGGQSISIHEFLYPLVQGYDSV--AMNAD--IELGGTDQKFNLLMGRELQKQQGQE 208

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               +T PLL    G  KM K+    I + +   +P + +    +I D  +  + + L+ 
Sbjct: 209 PQVIITMPLLEGLDGVKKMSKSSQNYIGIEE---NPNDMFGKVMSISDELMWRYYELLS- 264

Query: 279 LPMSEIDRMAKLQ-----GKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS 333
                +D +A L+     G    + K  +A E+    H +E+AE    +A + F      
Sbjct: 265 --FKSLDTIANLKQDVANGTNPRDIKIELAKELIERFHSKEDAE----SAHQDFIQRFQK 318

Query: 334 QHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKIN 380
             +P   I+  E+++ + +  L+ +AG   ST+EA R +K  A+KI+
Sbjct: 319 NQIPD-DINVVELNQELPIANLLKEAGLVASTSEAIRMIKQGAVKID 364


>gi|302335393|ref|YP_003800600.1| tyrosyl-tRNA synthetase [Olsenella uli DSM 7084]
 gi|301319233|gb|ADK67720.1| tyrosyl-tRNA synthetase [Olsenella uli DSM 7084]
          Length = 405

 Score =  108 bits (269), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 98/350 (28%), Positives = 159/350 (45%), Gaps = 24/350 (6%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D T+  LH GH   L  +   Q  GHK   ++G GT++IGDPS RD +R  +  +++
Sbjct: 38  LGVDPTSPDLHLGHAVPLRKMRQFQDFGHKVTLIIGNGTALIGDPSGRDSTRPPLTEEQV 97

Query: 100 QENIEKIKGIFSSFIKYGTGKTDA---LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSF 156
           + N +       ++++      D     +++N  WL  +    +L E+ S F+V R+L  
Sbjct: 98  EANAQ-------TYVEQAMKVLDPQKTAIVHNGDWLKPLDLAKML-ELMSRFNVARILER 149

Query: 157 ESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL 216
           E   +R     S+S  EF Y +LQAYD V +  +    L+MGG+DQ  N++ G DL   +
Sbjct: 150 EDFHNRYTGGLSISLHEFIYPVLQAYDSVVVKAD----LEMGGNDQIFNLLAGRDLMRSM 205

Query: 217 KTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKR 275
                 ALT PLL    G  KM K+    + L        + +    +I D  V  + + 
Sbjct: 206 GMEPQVALTVPLLVGLDGHKKMSKSYKNYVGLTD---GSNDMYGKLMSIADEIVPMYFRL 262

Query: 276 LTTLPMSEIDRM--AKLQGK-EINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIH 332
            +TL + EID +  A   G  +    K+ +A  I  + HG    + A  A    F  +  
Sbjct: 263 CSTLSVDEIDAIDAAYADGSADPYRLKRQLARNIVDLYHGDGAGDAAEAAFDAQFKQNKV 322

Query: 333 SQHMPTISISKDEVSR--GMGLLTLIVKAGFATSTNEARRHLKSNAIKIN 380
              +    +S   V+    + L  L+     A S  EARR +    +K++
Sbjct: 323 PDDIAEFPLSVAAVNDEGKVYLAKLLSDVKIAQSAGEARRLIDGGGVKVD 372


>gi|91070497|gb|ABE11406.1| tyrosyl-tRNA synthetase [uncultured Prochlorococcus marinus clone
           HOT0M-1A11]
          Length = 412

 Score =  108 bits (269), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 94/381 (24%), Positives = 178/381 (46%), Gaps = 32/381 (8%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D T + +H GH      L   Q  GH  + ++G  T+ IGDP+ ++++R  +  +++
Sbjct: 46  LGIDPTGTDIHLGHSILFKKLRAFQDNGHIAVLIIGDFTAQIGDPTGKNKTRLQLSEKQV 105

Query: 100 QENIEKI-------KGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNR 152
           ++N +         K    S + + +     +  N+E WL  +    ++  +GS  +V++
Sbjct: 106 KDNAKTYLTQLGMGKPANESILDFDSKDRIEIRYNSE-WLKGLNLNSIIELMGS-ATVSQ 163

Query: 153 MLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL 212
           ML+ E    R   +  ++  EF Y +LQ YD V +  +    +++GG+DQ  NI  G DL
Sbjct: 164 MLAKEEFNKRYTSQIPIALHEFLYPLLQGYDSVVVRSD----IELGGTDQKFNIAIGRDL 219

Query: 213 GERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVS 271
               K    F +  P+LT   G  KM K+    + L  +   P + +     + D  + +
Sbjct: 220 QRYFKQEPQFGVLLPILTGLDGFKKMSKSEFNTVGLTDD---PLSMYSKLEKVPDNIIPT 276

Query: 272 FAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSI 331
           + + LT L +S ++ +         E ++ +A E+TT+ HG +EA +A +   + F +  
Sbjct: 277 YFELLTELDLSFLENLNP------RELQRRMALEVTTLFHGAKEALEAQSNCEKLF-LGY 329

Query: 332 HSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
             +      IS  E+   +    L+       S++E++R +K   +KI++  + N  L  
Sbjct: 330 KEKVGEVPEISLKEIVFPVKFFYLLSALKLFKSSSESKRSIKGGGVKIDSQKVINPDLV- 388

Query: 392 KLQDFDSTGNIK---LSFGKK 409
               FDS  +++   L  GKK
Sbjct: 389 ----FDSKNDLEGKILQIGKK 405


>gi|332991825|gb|AEF01880.1| tyrosyl-tRNA synthetase [Alteromonas sp. SN2]
          Length = 399

 Score =  108 bits (269), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 90/363 (24%), Positives = 169/363 (46%), Gaps = 17/363 (4%)

Query: 30  LCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDE 89
           L S   +T   G+D TA  LH GH   +  L   Q+ GH  + L+G  T +IGDP+ ++ 
Sbjct: 28  LKSGKTLTIKAGFDPTAPDLHLGHTVLINKLRTFQQLGHTVVFLIGDFTGLIGDPTGKNV 87

Query: 90  SRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFS 149
           +R+ +  +++ EN +  +       K    +   +  N+E W+  +    +++ + +  +
Sbjct: 88  TRKPLNKEQVLENAQTYQ---EQVFKILDPELTQIRFNSE-WMDQLGAAGMIK-LAASQT 142

Query: 150 VNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICG 209
           V RML  +  + R    Q ++  EF Y ++Q +D V L  +    +++GG+DQ  N++ G
Sbjct: 143 VARMLERDDFKKRYNNGQPIAIHEFLYPLVQGWDSVALKSD----VELGGTDQRFNLLMG 198

Query: 210 IDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDAD 268
            +L +         +  PLL    G  KM K+L+  I +     +P + +    +I D  
Sbjct: 199 RELQKEQGIKPQSIVMVPLLEGLDGVQKMSKSLNNYIGIT---DAPNDMFGKVMSISDDL 255

Query: 269 VVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIATEITTMVHGREEAEKAATAAMEC 326
           +  +   L+  P+ EI  + +    G+   + K ++A EI    H    AE A    ++ 
Sbjct: 256 MWRYYDLLSFRPLEEIAELKQRVENGENPRDIKILLAKEIIARFHDDAAAEGAHQDFIQR 315

Query: 327 FDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISN 386
           F  +     MP   I+  +   G+ +  L+ +     ST++A R +K  A+KIN   + +
Sbjct: 316 FQKNAIPDEMPEFEIALGD--DGIAIGNLLKETKLVGSTSDAMRMIKQGAVKINGDKVED 373

Query: 387 EKL 389
            +L
Sbjct: 374 TRL 376


>gi|262374733|ref|ZP_06068005.1| tyrosyl-tRNA synthetase [Acinetobacter junii SH205]
 gi|262310389|gb|EEY91481.1| tyrosyl-tRNA synthetase [Acinetobacter junii SH205]
          Length = 410

 Score =  108 bits (269), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 94/386 (24%), Positives = 171/386 (44%), Gaps = 42/386 (10%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           I+SE   + ++   R L +           G+D TA  LH GH   +  L   Q  GH+ 
Sbjct: 27  IISEEDLLKKLKENRPLRVKA---------GFDPTAPDLHLGHTVLINKLKTFQDLGHEV 77

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEI-------QENIEKIKGIFSSFIKYGTGKTDA 123
             L+G  T++IGDP+ +  +R  +  +++       QE + KI     + +++       
Sbjct: 78  TFLIGDYTAMIGDPTGKSATRPPLSKEQVLANAKTYQEQVFKILDPNKTKVRF------- 130

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
               N  W       DL+ ++ S  +V+RML  +    R    Q ++  EF Y ++Q YD
Sbjct: 131 ----NSEWFNQKSAADLI-QLASQQTVSRMLERDDFTKRYNNHQPIAIHEFLYPLVQGYD 185

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLS 242
            + L    +  +++GG+DQ  N++ G  L  R        +T P+L    G  KM K+L 
Sbjct: 186 SIAL----EADVELGGTDQTFNLLMGRTLQGRYGQESQVCITVPILEGLDGVNKMSKSLG 241

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI----DRMAKLQGKEINEA 298
             I +     +P   +Q   ++ D+ +  +   L+   + EI    + MA   G+   E 
Sbjct: 242 NYIGV---FDTPGAMYQKILSMPDSLIERYFDLLSFKSLDEIKVLLEEMAA--GRNPQEI 296

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVK 358
           K+I+A E+    H  E AE A  +A          +  P ++IS+ E    + + T++  
Sbjct: 297 KRILALELVERFHDAEAAENAHKSAGNRITEGEVPEDTPEVTISRAEFGGELFIATILRV 356

Query: 359 AGFATSTNEARRHLKSNAIKINNSII 384
           AG   +   A+  +   A+K++ +++
Sbjct: 357 AGLNPNAASAKDAVGRGAVKVDWNVV 382


>gi|308050795|ref|YP_003914361.1| tyrosyl-tRNA synthetase [Ferrimonas balearica DSM 9799]
 gi|307632985|gb|ADN77287.1| tyrosyl-tRNA synthetase [Ferrimonas balearica DSM 9799]
          Length = 395

 Score =  108 bits (269), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 95/353 (26%), Positives = 164/353 (46%), Gaps = 20/353 (5%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  L   Q+ GH+ I L+G  T ++GDPS ++ +R  +  +++
Sbjct: 38  LGADPTAPDIHLGHTVILNKLRQFQELGHEVIFLIGDFTGMVGDPSGKNTTRPPLTREQV 97

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
             N E  K      +     + +     N +WL  +    +LR + S  +V RML  +  
Sbjct: 98  LANAETYKEQVFKILDPAKTRIEF----NSSWLGELGAEGMLR-LASQQTVARMLERDDF 152

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
           + R    QS++  EF Y +LQ +D V L    +  +++GG+DQ  N++ G +L +     
Sbjct: 153 KKRFGGGQSIAIHEFMYPLLQGHDSVAL----EADVELGGTDQKFNLLMGRELQKDAGQS 208

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               +T PLL    G  KM K+ +  I ++    +P   +    +I D  + ++ + L+ 
Sbjct: 209 PQVVITMPLLVGLDGVKKMSKSANNYIGVS---DAPSEMFGKIMSISDDLMWNYYELLSF 265

Query: 279 LPMSEIDRM-AKLQ-GKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM 336
            P+ EI ++ A ++ G    + K  +A EI    H    AE A    +  F  +     M
Sbjct: 266 RPLEEIAQLKADIEAGTNPRDVKIALAKEIIARFHDEAAAEAAHQDFINRFSKNAIPDEM 325

Query: 337 PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKL 389
           P       E   G+ +  L+ +AG   +T++A R +K    KI+   I + KL
Sbjct: 326 PEF-----EFEAGIAIANLLKEAGLVNTTSDAMRMIKQGGAKIDGDKIEDSKL 373


>gi|21233264|ref|NP_639181.1| tyrosyl-tRNA synthetase [Xanthomonas campestris pv. campestris str.
           ATCC 33913]
 gi|66770222|ref|YP_244984.1| tyrosyl-tRNA synthetase [Xanthomonas campestris pv. campestris str.
           8004]
 gi|188993420|ref|YP_001905430.1| tyrosyl-tRNA synthetase [Xanthomonas campestris pv. campestris str.
           B100]
 gi|81303830|sp|Q4UPQ9|SYY_XANC8 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|81792490|sp|Q8P475|SYY_XANCP RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|21115100|gb|AAM43072.1| tyrosyl-tRNA synthetase [Xanthomonas campestris pv. campestris str.
           ATCC 33913]
 gi|66575554|gb|AAY50964.1| tyrosyl-tRNA synthetase [Xanthomonas campestris pv. campestris str.
           8004]
 gi|167735180|emb|CAP53392.1| unnamed protein product [Xanthomonas campestris pv. campestris]
          Length = 403

 Score =  108 bits (269), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 94/354 (26%), Positives = 159/354 (44%), Gaps = 25/354 (7%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   L  +   Q+ GH+ I L+G  T +IGDPS ++ +R+ +  +++ 
Sbjct: 39  GFDPTAPDLHLGHTVLLNKMRQFQELGHQVIFLIGDFTGMIGDPSGKNVTRKPLSREDVL 98

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
            N    +      +     +T   +  N  W   +   D+++ + +  +V RML  +   
Sbjct: 99  ANARTYEEQVFKILD----RTRTEVRFNSEWFGQMSAADMIK-LSAQHTVARMLERDDFA 153

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R   +Q ++  EF Y ++Q YD V L  +    +++GG+DQ  N++ G  L E      
Sbjct: 154 KRFAGQQPIAIHEFLYPLVQGYDSVALKAD----VELGGTDQTFNLLMGRGLQEHYGQAP 209

Query: 221 LFALTSPLLTTASGT-KMGKTLSGAIWLNKEM------TSPYNFWQYWRNIDDADVVSFA 273
              LT PLL    G  KM K+L   I +N+        T        WR I   D++SF 
Sbjct: 210 QVVLTMPLLEGLDGVAKMSKSLGNYIGINEPAIDIVTKTMKIGDTLTWRWI---DLLSFD 266

Query: 274 KRLTTLPMSEIDRMA-KLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIH 332
             +      + D  A  L  +++   K  +A E+ T  H    AE+A             
Sbjct: 267 ISVAEAARFKEDVAAGNLHPRDV---KLRLARELATRFHDAATAEQAIAGWHAVVTGQGD 323

Query: 333 SQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISN 386
           +  +P   +S    + G+ + +L+  AG   S +EA R LK  A+KI+  ++ +
Sbjct: 324 TSVLPLQQVSVP--AEGLRIASLLTAAGLTPSNSEATRKLKERAVKIDGEVVDD 375


>gi|296125527|ref|YP_003632779.1| tyrosyl-tRNA synthetase [Brachyspira murdochii DSM 12563]
 gi|296017343|gb|ADG70580.1| tyrosyl-tRNA synthetase [Brachyspira murdochii DSM 12563]
          Length = 396

 Score =  108 bits (269), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 96/354 (27%), Positives = 164/354 (46%), Gaps = 20/354 (5%)

Query: 36  VTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMR 95
           +T   G+D TA  +H GH   L  +   Q  GHK + L+G  T  IGDPS + ++R  + 
Sbjct: 36  LTVKAGFDPTAPDIHLGHTVLLRKMRHFQLLGHKVVFLIGDFTGRIGDPSGKTKTRPRLT 95

Query: 96  SQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLS 155
            +++ +N E  K     F      KT  ++  N  WL  + + D+L  + S ++V +M+ 
Sbjct: 96  LEDVLKNAETYKQ--QVFKILDPEKT--IVEFNSKWLEKMSFADVLG-LTSRYTVAQMIE 150

Query: 156 FESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER 215
            +    R K  Q +S +EF Y + Q YD V L    +C +++GG+DQ  N++ G  L + 
Sbjct: 151 RDDFSKRYKNGQPISIMEFLYPLAQGYDSVAL----ECDVELGGNDQKFNLLVGRTLMKE 206

Query: 216 LKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAK 274
                   +T PLL    G  KM K+L   I +     S  + +    +I D  +  + +
Sbjct: 207 YGLSPQAVITVPLLEGLDGVEKMSKSLGNYIGI---YDSAKDMYGKAMSIPDNLISKYME 263

Query: 275 RLTTLPMSEIDRMAKL--QGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIH 332
            LT +P+ +I    K    G+     K I+A EI  + HG EEA  A       F     
Sbjct: 264 LLTDIPIEDIKNYTKSMENGENPRNIKGILAKEIVKIYHGEEEANNAEEEFKRIFSSKGL 323

Query: 333 SQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISN 386
              +  +SI+KD+      +L ++     + S +  +R +   ++ ++N  I++
Sbjct: 324 PDEIDEVSINKDD-----NILNILSVCMPSESKSNLKRLVSQGSVSLDNEKIND 372


>gi|208779384|ref|ZP_03246730.1| tyrosyl-tRNA synthetase [Francisella novicida FTG]
 gi|208745184|gb|EDZ91482.1| tyrosyl-tRNA synthetase [Francisella novicida FTG]
          Length = 396

 Score =  107 bits (268), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 98/360 (27%), Positives = 171/360 (47%), Gaps = 36/360 (10%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G D TA  +H GH   +  L  LQ  GH+   L+G  T+ IGDP+ ++ +R  + ++E+ 
Sbjct: 39  GCDPTAPDIHLGHTVVINKLKQLQDLGHEIHFLIGDFTAQIGDPTGKNATRPPLTAEEVA 98

Query: 101 ENIEK-IKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
            N E   K +F    K  T     ++  N  W   +   ++++ + S  +V RML  +  
Sbjct: 99  ANAETYTKQVFKILDKDKT-----VIRRNGDWFNKMSASEMIK-LASKSTVARMLERDDF 152

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R K  QS+S  EF Y ++Q YD V  A N D  +++GG+DQ  N++ G +L ++    
Sbjct: 153 SKRYKGGQSISIHEFLYPLVQGYDSV--AMNAD--IELGGTDQKFNLLMGRELQKQQGQE 208

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYN---------FWQYWRNIDDADV 269
               +T PLL    G  KM K+    + + +     +           W+Y+      ++
Sbjct: 209 PQVIITMPLLEGLDGVKKMSKSSQNYVGIEEPANEIFGKIMSISDELMWRYY------EL 262

Query: 270 VSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDM 329
           +SF K L  +   + D  A    ++I   K  +A E+    H +E+AE     A + F  
Sbjct: 263 LSF-KSLENIAKLKQDVAAGANPRDI---KIELAKELIERFHSKEDAE----IAHQDFIQ 314

Query: 330 SIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKL 389
                 +P   I+  E+++ + +  L+ +AG   ST+EA R ++  A+KI+   +S+ K+
Sbjct: 315 RFQKNQIPD-DINVVELNQELPIANLLKEAGLVASTSEANRMIQQGAVKIDGEKLSDGKI 373


>gi|84622137|ref|YP_449509.1| tyrosyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae MAFF 311018]
 gi|108935931|sp|Q5H5K1|SYY_XANOR RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|115305832|sp|Q2P892|SYY_XANOM RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|84366077|dbj|BAE67235.1| tyrosyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae MAFF 311018]
          Length = 403

 Score =  107 bits (268), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 99/384 (25%), Positives = 170/384 (44%), Gaps = 42/384 (10%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   L  +   Q+ GH+ I L+G  T +IGDPS ++ +R+ +  +++ 
Sbjct: 39  GFDPTAPDLHLGHTVLLNKMRQFQQLGHQVIFLIGDFTGMIGDPSGKNATRKPLSREDVL 98

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
            N    +       K    +   +  N+E W   +   D+++ + +  +V RML  +   
Sbjct: 99  ANARTYE---EQVFKILDRERTEVRFNSE-WFGQMSAADMIK-LSAQHTVARMLERDDFA 153

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R   +Q ++  EF Y ++Q YD V L  +    +++GG+DQ  N++ G  L E      
Sbjct: 154 KRFGSQQPIAIHEFLYPLVQGYDSVALRAD----VELGGTDQKFNLLMGRGLQEHYGQAP 209

Query: 221 LFALTSPLLTTASGT-KMGKTLSGAIWLNKEM------TSPYNFWQYWRNID-------D 266
              LT PLL    G  KM K+L   I +N+        T        WR ID        
Sbjct: 210 QIVLTMPLLEGLEGVAKMSKSLGNYIGINEPAIDIVTKTMKIGDELTWRWIDLLSLDISV 269

Query: 267 ADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMEC 326
           A+ V   +++T+          +L  +E+   K  +A E+ T  H    AE+A       
Sbjct: 270 AEAVRLKEQVTS---------GELHPREV---KLRLARELATRFHDAATAEQAIAGWHAV 317

Query: 327 FDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISN 386
                 +  +P   +     + G+ + +L+  AG   S +EA R LK  A+KI+  ++ +
Sbjct: 318 VTGQGDTSLLPLQEVVVP--AEGLRIASLLTAAGLTPSNSEATRKLKERAVKIDGEVLED 375

Query: 387 EKLQIKLQDFDSTGNIKLSFGKKN 410
              ++  Q F+      +  GK+N
Sbjct: 376 AT-RVFTQGFEGV----IQVGKRN 394


>gi|153840518|ref|ZP_01993185.1| tyrosyl-tRNA synthetase [Vibrio parahaemolyticus AQ3810]
 gi|149745819|gb|EDM56949.1| tyrosyl-tRNA synthetase [Vibrio parahaemolyticus AQ3810]
          Length = 395

 Score =  107 bits (268), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 91/353 (25%), Positives = 164/353 (46%), Gaps = 20/353 (5%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH      L   Q+ GH+   L+G  T+++GDP+ ++ +R  +  +++
Sbjct: 38  LGADPTAPDIHIGHTVIFNKLRLFQELGHEVTFLIGDFTAMVGDPTGKNTTRPPLSREDV 97

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
             N E  K      +     K   +  N+E WL  +    ++R + +  +V RML  ++ 
Sbjct: 98  LRNAETYKEQVFKILDPAKTK---IQFNSE-WLSELGAEGMIR-LAANQTVARMLERDNF 152

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
           + R    Q ++  EF Y +LQ +D V +    +  +++GG+DQ  N++ G +L +     
Sbjct: 153 KKRYAGGQPIAIHEFMYPLLQGWDSVAM----ETDVELGGTDQKFNLLMGRELQKSHGQK 208

Query: 220 KLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               L  PLL    G  KM K+    I +++   +P   +    +I D  + S+ + L+ 
Sbjct: 209 PQVVLMMPLLVGLDGEKKMSKSAGNYIGISE---APSEMFGKIMSISDDLMWSYYELLSF 265

Query: 279 LPMSEIDRM-AKLQ-GKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM 336
            P+ EI++  A +Q GK   + K ++A EI    H   +A+ A    +  F  +     M
Sbjct: 266 RPLEEIEQFKADVQAGKNPRDIKVLLAKEIIARFHSEADADAAEQEFVNRFAKNQIPDEM 325

Query: 337 PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKL 389
           P       +   G  +  L+  AG   ST+EA R +K  A K+    +++ K 
Sbjct: 326 PEF-----DFDAGTPVANLLKDAGLCASTSEAMRMVKQGAAKVEGEKVADAKF 373


>gi|331697989|ref|YP_004334228.1| tyrosyl-tRNA synthetase [Pseudonocardia dioxanivorans CB1190]
 gi|326952678|gb|AEA26375.1| tyrosyl-tRNA synthetase [Pseudonocardia dioxanivorans CB1190]
          Length = 464

 Score =  107 bits (268), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 95/359 (26%), Positives = 160/359 (44%), Gaps = 43/359 (11%)

Query: 37  TAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRS 96
            A  G D T + +H GH   + +L   Q+ GH  + ++G  T+ IGDPS R + R  +  
Sbjct: 82  VAKFGIDPTGAEVHLGHSVPMQILSRFQRMGHDVVFIVGDMTAKIGDPSGRSDDRPALTD 141

Query: 97  QEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSF 156
           ++I+ N+   +   S F  +      A    N  WL  I   +++  I +   V+  L  
Sbjct: 142 EDIEHNLATYREQVSPFFDFDR----AHFRRNGDWLRKITLPEII-GITAQIPVSMSLQR 196

Query: 157 ESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNI-ICGIDLGER 215
           E  R RL   Q LS  E  Y I+ A D VE+    +C L++GG DQ+ N+ +C   +   
Sbjct: 197 EDFRKRLDAGQGLSLAELMYSIVMALDSVEI----NCDLEVGGIDQFLNMQMCRKVMEIS 252

Query: 216 LKTPKLFALTSPLL-TTASGTKMGKTLSGAIWLN--------KEMTSPYNFWQ-YWRNID 265
            + P+L   TS +  T  +G KM K+    + L         K M+ P    + Y+R + 
Sbjct: 253 GQVPELVVATSLIEGTDGTGAKMSKSKGNYVPLTAAPGEIFGKIMSVPDRLVEPYFRALS 312

Query: 266 ---DADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATA 322
              DA++   A+R+    +  +D             KK++A E+T  +HG + A KA   
Sbjct: 313 EWLDAELAVAAERVAAGTLHPMD------------LKKVLAGEVTAAIHGVDAAMKARDE 360

Query: 323 AMECFDMSIHSQ--HMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKI 379
               F     ++   +PT++        G+ +   +   GFA S  + RR  + N +++
Sbjct: 361 FAARFSRRTFAEVDDLPTVA------DLGVSVTEAVKALGFAASNGDVRRVAQQNGLRL 413


>gi|33861885|ref|NP_893446.1| tyrosyl-tRNA synthetase [Prochlorococcus marinus subsp. pastoris
           str. CCMP1986]
 gi|81575709|sp|Q7V0D7|SYY_PROMP RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|33640253|emb|CAE19788.1| Tyrosyl-tRNA synthetase [Prochlorococcus marinus subsp. pastoris
           str. CCMP1986]
          Length = 412

 Score =  107 bits (268), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 101/392 (25%), Positives = 187/392 (47%), Gaps = 38/392 (9%)

Query: 32  SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESR 91
           S+  +   +G D T + +H GH      L   Q  GH  + ++G  T+ IGDP+ ++++R
Sbjct: 38  SKSKLRVKLGIDPTGTDIHLGHSILFKKLRAFQDNGHVAVLIIGDFTAQIGDPTGKNKTR 97

Query: 92  RMMRSQEIQENIEKIKGIFSSFIKYGTGK-TDALMLN-----------NETWLCSIKYID 139
             +  +E++EN +      +   + G GK +D  +L+           N  WL ++    
Sbjct: 98  VQLSEEEVKENSK------TYLNQLGMGKSSDKSILDFDSEDRIEIRYNSEWLKNLNLNS 151

Query: 140 LLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGG 199
           ++  +GS  +V++ML+ E    R   +  ++  EF Y +LQ YD V  A N D  +++GG
Sbjct: 152 IIELMGS-ATVSQMLAKEEFNKRYNSQTPIALHEFLYPLLQGYDSV--AVNSD--IELGG 206

Query: 200 SDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFW 258
           +DQ  NI  G DL    K    + +  P+LT   G  KM K+ S  + L+++  S Y+  
Sbjct: 207 TDQKFNIAIGRDLQRHFKQEPQYGILLPILTGLDGIKKMSKSESNTVGLSEDSLSMYSKL 266

Query: 259 QYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEK 318
           +    + D  + S+        +     +  L+     + ++ +A E+T++ HG+EEA +
Sbjct: 267 E---KVPDNIIPSY------FELLTELDLTLLKDNNPRDLQRRMALEVTSLYHGKEEALR 317

Query: 319 AATAAMECF-DMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAI 377
           A +   + F  +      +P IS+   E+   +    L+       S++E++R +K   +
Sbjct: 318 AQSNCEKLFLGLKEKVGEIPIISLK--EIVFPVKFFYLLSSLNLFKSSSESKRSIKGGGV 375

Query: 378 KINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
           KI++  + N  L    ++ D +G I L  GKK
Sbjct: 376 KIDSYKLVNPDLVFDSKE-DLSGKI-LQIGKK 405


>gi|303325614|ref|ZP_07356057.1| tyrosine--tRNA ligase [Desulfovibrio sp. 3_1_syn3]
 gi|302863530|gb|EFL86461.1| tyrosine--tRNA ligase [Desulfovibrio sp. 3_1_syn3]
          Length = 398

 Score =  107 bits (268), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 102/411 (24%), Positives = 179/411 (43%), Gaps = 27/411 (6%)

Query: 12  LSERGFIHQISNPRELDILCSQGV-VTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           L +RG + ++ +  EL    ++GV +   +G+D TA  LH GH   +  +   Q+ GH  
Sbjct: 10  LIKRG-VAELIDEGELRKKLARGVPLRVKVGFDPTAPDLHLGHTVVMHKMRHFQELGHTV 68

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           I L+G  T  IGDPS R E+R  +  +++  N E  K     F      KT      N  
Sbjct: 69  IFLIGDFTGRIGDPSGRSETRPPLTEEQVLANAETYKK--QVFKILDPEKTQVEF--NSR 124

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           WL  +     ++ + S ++V RM+  +    R + ++ +S  EF Y + Q +D V L  +
Sbjct: 125 WLSKLDATGFIK-LASSYTVARMMERDDFEKRFREQRPISIHEFLYPLCQGFDSVSLKTD 183

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNK 249
               ++MGG+DQ  N++ G +L           LT PLL    G  KM K+    I +++
Sbjct: 184 ----VEMGGTDQKFNLLVGRNLQTHYGQESQCILTMPLLEGTDGVRKMSKSYGNYIGIDE 239

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGK-EINEAKKIIATEI 306
               P   +     + D  +  + + L+   + EI  + +   +G+     AK+ +A E+
Sbjct: 240 ---PPAEIFGKVMGVSDELMWRYYELLSAKSLEEISALKRDVAEGRVHPKAAKEALAHEM 296

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
            +  H  ++A++A       F         P++S    E S     L     AG   S  
Sbjct: 297 VSRYHSGKDADEARQGFNAVFADGGVPADAPSLSCQYGEDSTPPAFLE---AAGLVKSRG 353

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           EA+R +K  A+ ++     +    +        G+  +  GKK  +  ++C
Sbjct: 354 EAKRLIKEGALSVDGQRCDDALAPL------PAGDYVIKLGKKRFLKLNVC 398


>gi|159903924|ref|YP_001551268.1| tyrosyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9211]
 gi|159889100|gb|ABX09314.1| Tyrosyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9211]
          Length = 415

 Score =  107 bits (268), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 104/390 (26%), Positives = 178/390 (45%), Gaps = 35/390 (8%)

Query: 32  SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESR 91
           +Q  +   +G D T S +H GH      L   Q  GH  + ++G  T+ IGDP+ + ++R
Sbjct: 42  NQSPLRIKLGIDPTGSEIHLGHSILFRKLRSFQDAGHIAVLIIGDFTARIGDPTGKSKTR 101

Query: 92  RMMRSQEIQEN----IEKI---KGIFSSFIKYGTGKTDALMLNNETWLCSI---KYIDLL 141
             + S+E+++N    +E++   K   +S + + T     +  N+E WL      K IDLL
Sbjct: 102 NQLTSEEVEKNAITYLEQLGYGKSSETSLLDFETPGRIEIRRNSE-WLSDFDMSKIIDLL 160

Query: 142 REIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSD 201
               S  +V +ML+ E   +R      +S  E  Y +LQ YD V +  +    +++GG+D
Sbjct: 161 ----SHATVGQMLAKEDFANRYNSGTPISLHELLYPLLQGYDSVAVKAD----VELGGTD 212

Query: 202 QWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQY 260
           Q  N+  G D+         F L  P+L    G  KM KTL+  + L  +  S Y+  + 
Sbjct: 213 QKFNVAMGRDIQRLFDQRPQFGLLLPILVGLDGVQKMSKTLANTVALKDDALSMYSKLE- 271

Query: 261 WRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAA 320
              I D  V S+   LT L  +++          + E +K++A  +T   HG   A  A 
Sbjct: 272 --KIPDDLVNSYLTLLTNLEQTDMP-------SNLREKQKLMALNVTANFHGMPAAIAAQ 322

Query: 321 TAAMECF-DMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKI 379
             A +    +      +P +SI K  V+  +    L+   G   S++EARR +   A+++
Sbjct: 323 EDASKLVAGLQDSLSDVPEVSIKK--VNLPVKAFYLLSAIGLCKSSSEARRQILGGAVRL 380

Query: 380 NNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
           +   I +  L+    D +  G + +  GK+
Sbjct: 381 DGKKILDPNLEFD-NDSELVGKV-VQLGKR 408


>gi|166710378|ref|ZP_02241585.1| tyrosyl-tRNA synthetase [Xanthomonas oryzae pv. oryzicola BLS256]
          Length = 403

 Score =  107 bits (268), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 100/380 (26%), Positives = 173/380 (45%), Gaps = 34/380 (8%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   L  +   Q+ GH+ I L+G  T +IGDPS ++ +R+ +  +++ 
Sbjct: 39  GFDPTAPDLHLGHTVLLNKMRQFQQLGHQVIFLIGDFTGMIGDPSGKNATRKPLSREDVL 98

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
            N    +       K    +   +  N+E W   +   D+++ + +  +V RML  +   
Sbjct: 99  ANARTYE---EQVFKILDRERTEVRFNSE-WFGQMSAADMIK-LSAQHTVARMLERDDFA 153

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R   +Q ++  EF Y ++Q YD V L  +    +++GG+DQ  N++ G  L E      
Sbjct: 154 KRFGSQQPIAIHEFLYPLVQGYDSVALKAD----VELGGTDQKFNLLMGRGLQEHYGQAP 209

Query: 221 LFALTSPLLTTASGT-KMGKTLSGAIWLNKEM------TSPYNFWQYWRNIDDADVVSFA 273
              LT PLL    G  KM K+L   I +N+        T        WR I   D++SF 
Sbjct: 210 QIVLTMPLLEGLDGVAKMSKSLGNYIGINEPAIDIVTKTMKIGDELTWRWI---DLLSF- 265

Query: 274 KRLTTLPMSEIDRM-AKLQGKEIN--EAKKIIATEITTMVHGREEAEKAATAAMECFDMS 330
                + ++E  R+  ++   E++  E K  +A E+ T  H    AE+A           
Sbjct: 266 ----DISVAEAVRLKEQVTSGELHPREVKLRLARELATRFHDAVTAEQAIAGWHAVVTGQ 321

Query: 331 IHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQ 390
             +  +P   +     + G+ + +L+  AG   S +EA R LK  A+KI+  ++ +   +
Sbjct: 322 GDTSLLPLQEVVVP--AEGLRIASLLTAAGLTPSNSEATRKLKERAVKIDGEVLEDAT-R 378

Query: 391 IKLQDFDSTGNIKLSFGKKN 410
           +  Q F+      +  GK+N
Sbjct: 379 VFTQGFEGV----IQVGKRN 394


>gi|325917548|ref|ZP_08179751.1| tyrosyl-tRNA synthetase [Xanthomonas vesicatoria ATCC 35937]
 gi|325536264|gb|EGD08057.1| tyrosyl-tRNA synthetase [Xanthomonas vesicatoria ATCC 35937]
          Length = 403

 Score =  107 bits (268), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 97/357 (27%), Positives = 157/357 (43%), Gaps = 31/357 (8%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   L  +   Q+ GH+ I L+G  T +IGDPS ++ +R+ +   ++ 
Sbjct: 39  GFDPTAPDLHLGHTVLLNKMRQFQELGHQVIFLIGDFTGMIGDPSGKNVTRKPLSRDDVL 98

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
            N    +       K    +   +  N+E W   +   D+++ + +  +V RML  +   
Sbjct: 99  ANARTYE---EQVFKILDRERTEVRFNSE-WFGQMSAADMIK-LSAQHTVARMLERDDFA 153

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R   +Q ++  EF Y ++Q YD V L  +    +++GG+DQ  N++ G  L E      
Sbjct: 154 KRFAGQQPIAIHEFLYPLVQGYDSVALKAD----VELGGTDQKFNLLMGRGLQEHYGQAP 209

Query: 221 LFALTSPLLTTASGT-KMGKTLSGAIWLNKEM------TSPYNFWQYWRNID----DADV 269
              LT PLL    G  KM K+L   I +N+        T        WR ID    D  V
Sbjct: 210 QVVLTMPLLEGLDGVAKMSKSLGNYIGINEPAIDIVTKTMKIGDELTWRWIDLLSFDIGV 269

Query: 270 VSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDM 329
              A+      + E      L  +E+   K  +A E+TT  H    AE+A          
Sbjct: 270 AEAAR------LKEQVASGALHPREV---KLRLARELTTRFHDAATAEQAIAGWHAVVTG 320

Query: 330 SIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISN 386
              +  +P   +     + G+ + +L+  AG   S +EA R LK  A+KI+  +I +
Sbjct: 321 QGDTSLLPLQQVVIP--AEGLRIASLLTAAGLTPSNSEANRKLKERAVKIDGEVIED 375


>gi|28899244|ref|NP_798849.1| tyrosyl-tRNA synthetase [Vibrio parahaemolyticus RIMD 2210633]
 gi|260362167|ref|ZP_05775157.1| tyrosine--tRNA ligase [Vibrio parahaemolyticus K5030]
 gi|260879062|ref|ZP_05891417.1| tyrosine--tRNA ligase [Vibrio parahaemolyticus AN-5034]
 gi|260895937|ref|ZP_05904433.1| tyrosine--tRNA ligase [Vibrio parahaemolyticus Peru-466]
 gi|260900668|ref|ZP_05909063.1| tyrosine--tRNA ligase [Vibrio parahaemolyticus AQ4037]
 gi|81726996|sp|Q87LY8|SYY2_VIBPA RecName: Full=Tyrosyl-tRNA synthetase 2; AltName:
           Full=Tyrosine--tRNA ligase 2; Short=TyrRS 2
 gi|28807468|dbj|BAC60733.1| tyrosyl-tRNA synthetase [Vibrio parahaemolyticus RIMD 2210633]
 gi|308085376|gb|EFO35071.1| tyrosine--tRNA ligase [Vibrio parahaemolyticus Peru-466]
 gi|308089604|gb|EFO39299.1| tyrosine--tRNA ligase [Vibrio parahaemolyticus AN-5034]
 gi|308110889|gb|EFO48429.1| tyrosine--tRNA ligase [Vibrio parahaemolyticus AQ4037]
 gi|308111058|gb|EFO48598.1| tyrosine--tRNA ligase [Vibrio parahaemolyticus K5030]
 gi|328474221|gb|EGF45026.1| tyrosyl-tRNA synthetase [Vibrio parahaemolyticus 10329]
          Length = 395

 Score =  107 bits (268), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 91/353 (25%), Positives = 163/353 (46%), Gaps = 20/353 (5%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH      L   Q+ GH+   L+G  T+++GDP+ ++ +R  +  +++
Sbjct: 38  LGADPTAPDIHLGHTVIFNKLRLFQELGHEVTFLIGDFTAMVGDPTGKNTTRPPLSREDV 97

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
             N E  K      +     K   +  N+E WL  +    ++R + +  +V RML  +  
Sbjct: 98  LRNAETYKEQVFKILDPAKTK---IQFNSE-WLSELGAEGMIR-LAANQTVARMLERDDF 152

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
           + R    Q ++  EF Y +LQ +D V +    +  +++GG+DQ  N++ G +L +     
Sbjct: 153 KKRYAGGQPIAIHEFMYPLLQGWDSVAM----ETDVELGGTDQKFNLLMGRELQKSHGQK 208

Query: 220 KLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               L  PLL    G  KM K+    I +++   +P   +    +I D  + S+ + L+ 
Sbjct: 209 PQVVLMMPLLVGLDGEKKMSKSAGNYIGISE---APSEMFGKIMSISDDLMWSYYELLSF 265

Query: 279 LPMSEIDRM-AKLQ-GKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM 336
            P+ EI++  A +Q GK   + K ++A EI    H   +A+ A    +  F  +     M
Sbjct: 266 RPLEEIEQFKADVQAGKNPRDIKVLLAKEIIARFHSEADADAAEQEFVNRFAKNQIPDEM 325

Query: 337 PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKL 389
           P       +   G  +  L+  AG   ST+EA R +K  A K+    +++ K 
Sbjct: 326 PEF-----DFDAGTPVANLLKDAGLCASTSEAMRMVKQGAAKVEGEKVADAKF 373


>gi|251778285|ref|ZP_04821205.1| tyrosine--tRNA ligase [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
 gi|243082600|gb|EES48490.1| tyrosine--tRNA ligase [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
          Length = 404

 Score =  107 bits (267), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 91/354 (25%), Positives = 168/354 (47%), Gaps = 28/354 (7%)

Query: 36  VTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMR 95
           +T  +G D +A  +H GH   L  +  +Q  GH+ + L+G  T  IGDP+ + ++R+ + 
Sbjct: 39  LTIKLGLDPSAPDIHLGHAVVLRKIKQMQDLGHRAVILIGDFTGKIGDPTGKSKTRKPLT 98

Query: 96  SQEIQEN-IEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRML 154
            +++ EN +   K I     K  T     +  N+E WL  +K+ ++L+ + +  +V RML
Sbjct: 99  QEQVIENAMTYQKQILKVLDKEKT----EIRFNSE-WLSKLKFEEVLK-LAATTTVARML 152

Query: 155 SFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
             E  ++R      +   EF Y ++Q YD + L  +    +++GG+DQ  NI+ G  L +
Sbjct: 153 EREDFKNRYSNNAPIGIHEFFYPLMQGYDSIVLKAD----IELGGTDQTFNILMGRTLQK 208

Query: 215 RLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFA 273
            +   +  A+  P+L    G  KM K+L   I ++++       ++    + D  ++ + 
Sbjct: 209 GMGMEQQIAIFMPILEGLDGVEKMSKSLGNYIGVDEQAEV---MFKKIMEVPDNLIIKYF 265

Query: 274 KRLTTLPMSEIDRM-AKLQ-GKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSI 331
           +  T      ID + + L+ GK   + K  +A  IT++ H  EE   A     + F    
Sbjct: 266 ELATDEHPDRIDEIKSDLESGKNPRDVKLELAKIITSLYHSEEETIAAIEYYEQVFKNGC 325

Query: 332 HSQHMPTISISKD-----EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKIN 380
               +P I+I K+     E+S+      ++V  G   S  E RR ++   ++IN
Sbjct: 326 LPSEVPEINIPKEFLKLKEISK------ILVDEGLVPSNKEFRRLVEQGGVQIN 373


>gi|239817633|ref|YP_002946543.1| tyrosyl-tRNA synthetase [Variovorax paradoxus S110]
 gi|239804210|gb|ACS21277.1| tyrosyl-tRNA synthetase [Variovorax paradoxus S110]
          Length = 410

 Score =  107 bits (267), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 97/365 (26%), Positives = 171/365 (46%), Gaps = 40/365 (10%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  +  LQ  GH+ I L+G  T+ IGDPS R+ +R  +  ++I
Sbjct: 53  LGLDPTAPDIHIGHTVVLNKMRQLQDLGHRVIFLIGDFTTTIGDPSGRNSTRPPLTREQI 112

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           + N +      S  +     KT+  +  N  W   +    ++ ++ + ++V RM+  +  
Sbjct: 113 EANAQTYYRQASLVLD--PEKTE--IRYNSEWSDPLGARGMI-QLAAKYTVARMMERDDF 167

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R K  QS+S  EF Y ++Q YD V L  +    L++GG+DQ  N++ G  L +     
Sbjct: 168 NKRFKAGQSISVHEFLYPLMQGYDSVALKSD----LELGGTDQKFNLLVGRHLQQEYGQE 223

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRL-- 276
               LT PLL    G  KM K+ +  I ++++  + +           A V+S +  L  
Sbjct: 224 PQCILTMPLLEGLDGVEKMSKSKNNYIGISEDANTMF-----------AKVLSISDELMW 272

Query: 277 ---TTLPMSEIDRMAKLQ-----GKEINEAKKIIATEITTMVHGREEAEKAATAAMECFD 328
              T L    + ++  L+     G+   +AK  +A EIT   H    A  A TA  +  +
Sbjct: 273 RWYTLLSFQSLAQIEALKAEIAAGRNPKDAKVALAKEITARFH---SAAAAETAEQDFIN 329

Query: 329 MSIH--SQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISN 386
            S       +P +S+        +G+  L+ +AG A S +E  R +    +++++ +IS+
Sbjct: 330 RSKGGVPDDIPELSLG----GAPLGIAQLLKQAGLAPSASEGNRLIDGGGVRVDSVVISD 385

Query: 387 EKLQI 391
           + L++
Sbjct: 386 KALKL 390


>gi|212704211|ref|ZP_03312339.1| hypothetical protein DESPIG_02266 [Desulfovibrio piger ATCC 29098]
 gi|212672415|gb|EEB32898.1| hypothetical protein DESPIG_02266 [Desulfovibrio piger ATCC 29098]
          Length = 399

 Score =  107 bits (267), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 92/346 (26%), Positives = 158/346 (45%), Gaps = 19/346 (5%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G+D TA  LH GH   +  +   Q+ GH+ I L+G  T  IGDP+ R E+R  +  +++
Sbjct: 38  VGFDPTAPDLHLGHTVVMHKMRHFQELGHQIIFLIGDFTGRIGDPTGRSETRPPLTEEQV 97

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
             N E  K     F      KT  ++  N  WL  +   D +R + S ++V RM+  +  
Sbjct: 98  IANAETYKK--QVFKILDPEKT--IVEFNSHWLGKMDASDFIR-LASSYTVARMMERDDF 152

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R + ++ +S  EF Y + Q YD V L  +    ++MGG+DQ  N++ G +L       
Sbjct: 153 EKRFREQRPISIHEFIYPLCQGYDSVALKAD----VEMGGTDQKFNLLVGRNLQAHYGME 208

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               LT PLL    G  KM K+    I +++   +P   +     I D  +  + + L+ 
Sbjct: 209 SQCILTMPLLEGLDGVRKMSKSYGNYIGIDE---APSEIFGKVMAISDELMWRYYELLSF 265

Query: 279 LPMSEIDRMAK--LQGK-EINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQH 335
             + EI  + +   QG+     AK+++A E+ +  H  ++A++A       F        
Sbjct: 266 KSLEEIATLKEDVAQGRVHPKAAKEMLAHEMVSRYHSEKDADEARQGFNAVFASGGVPDD 325

Query: 336 MPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINN 381
            P  + ++ + S     L     AG   S  EA+R +K  A+ ++ 
Sbjct: 326 APCHTCAQGDDSTPPAFLE---AAGLVKSRGEAKRLIKEGALSVDG 368


>gi|188589972|ref|YP_001921276.1| tyrosyl-tRNA synthetase [Clostridium botulinum E3 str. Alaska E43]
 gi|188500253|gb|ACD53389.1| tyrosyl-tRNA synthetase [Clostridium botulinum E3 str. Alaska E43]
          Length = 404

 Score =  107 bits (267), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 90/354 (25%), Positives = 168/354 (47%), Gaps = 28/354 (7%)

Query: 36  VTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMR 95
           +T  +G D +A  +H GH   L  +  +Q  GH+ + L+G  T  IGDP+ + ++R+ + 
Sbjct: 39  LTIKLGLDPSAPDIHLGHAVVLRKIKQMQDLGHRAVILIGDFTGKIGDPTGKSKTRKPLT 98

Query: 96  SQEIQEN-IEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRML 154
            +++ EN +   K I     K  T     +  N+E WL  +K+ ++L+ + +  +V RML
Sbjct: 99  QEQVIENAMTYQKQILKVLDKEKT----EIRFNSE-WLSKLKFEEVLK-LAATTTVARML 152

Query: 155 SFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
             +  ++R      +   EF Y ++Q YD + L  +    +++GG+DQ  NI+ G  L +
Sbjct: 153 ERDDFKNRYSNNAPIGIHEFFYPLMQGYDSIVLKAD----IELGGTDQTFNILMGRTLQK 208

Query: 215 RLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFA 273
            +   +  A+  P+L    G  KM K+L   I ++++       ++    + D  ++ + 
Sbjct: 209 GMGMEQQIAIFMPILEGLDGVEKMSKSLGNYIGVDEQAEV---MFKKIMEVPDNLIIKYF 265

Query: 274 KRLTTLPMSEIDRM-AKLQ-GKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSI 331
           +  T      ID + + L+ GK   + K  +A  IT++ H  EE   A     + F    
Sbjct: 266 ELATDEHPDRIDEIKSDLENGKNPRDVKLELAKIITSLYHSEEETRAAIEYYEQVFKNGC 325

Query: 332 HSQHMPTISISKD-----EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKIN 380
               +P I+I K+     E+S+      ++V  G   S  E RR ++   ++IN
Sbjct: 326 LPSEVPEINIPKEFLKLKEISK------ILVDEGLVPSNKEFRRLVEQGGVQIN 373


>gi|319653466|ref|ZP_08007566.1| tyrosyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2]
 gi|317394950|gb|EFV75688.1| tyrosyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2]
          Length = 418

 Score =  107 bits (267), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 97/362 (26%), Positives = 166/362 (45%), Gaps = 23/362 (6%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D +A  +H GH   L  L   Q  GH    ++G  T  IGDP+ +  +R  +  +E+
Sbjct: 54  LGLDPSAPDVHIGHTVVLNKLKQFQDNGHIIQLIIGDFTGKIGDPTGKSAARNQLTDEEV 113

Query: 100 QENIEKIKGIFSSFIKY-GTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
           + N    K  F  F K     K D  +  N  WL  ++  D++R + +  +V R+L    
Sbjct: 114 KRN---AKTYFEQFCKVLDMNKVD--LHYNSAWLSDLQLEDVIR-LSASITVARLLERND 167

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
              RL   + +S  EF Y ++Q YD V L    +  +++GG+DQ  N++ G  L E  + 
Sbjct: 168 FSERLSTGKPISLHEFFYPLMQGYDSVVL----ESDIELGGNDQHFNVLMGRHLQEHFQK 223

Query: 219 PKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT 277
            K   +  PLL    G  KM K+ +  I ++++   P N +    +I D  +  +    T
Sbjct: 224 EKQVVILMPLLEGLDGKEKMSKSKNNYIGVDED---PNNMYGKTMSIPDELIPKYFNLAT 280

Query: 278 TLPMSEIDRMAK-LQGKEIN--EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQ 334
            LP+ E  ++A+ L+   ++  +AK ++   I  M HG  EA+KA       F       
Sbjct: 281 DLPVKEKQQIAEGLENGTLHPRDAKMLLGKTIVRMYHGTGEADKAELHFKTIFQKGAIPD 340

Query: 335 HMPTISISKDEVSRGMGLLT-LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL 393
            +P           G  L+T L+   G  +S  EAR+ +    I++N   + + ++ +K+
Sbjct: 341 EIPEAEWK----GEGEVLITDLLAGLGLLSSKTEARKMIAGGGIRLNGQKVGDVQMLVKI 396

Query: 394 QD 395
            D
Sbjct: 397 TD 398


>gi|225012586|ref|ZP_03703021.1| Tyrosine--tRNA ligase [Flavobacteria bacterium MS024-2A]
 gi|225003119|gb|EEG41094.1| Tyrosine--tRNA ligase [Flavobacteria bacterium MS024-2A]
          Length = 158

 Score =  107 bits (267), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 59/159 (37%), Positives = 91/159 (57%), Gaps = 7/159 (4%)

Query: 6   SDFLSILSERGFIHQISNPRELDIL--CSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           ++F+  L  RG +H I    E  +L   S+G    YIG+D TA SLH G L Q+M+L   
Sbjct: 3   TNFVQELQWRGLLHDIMPETETFLLEKSSRG----YIGFDPTADSLHIGSLVQIMILMHF 58

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG-KTD 122
           Q+ GH PI L+GG T +IGDPS + + R ++    +++N   I+     F+ + +     
Sbjct: 59  QRHGHAPIILVGGATGMIGDPSGKSDERNLLDQVTLEKNCTGIQNQLERFLDFDSSLPNP 118

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
           A+++NN  W+ S   ID  RE+G   +VN M++ ESV+S
Sbjct: 119 AILVNNYDWMKSYSLIDFSREVGKHITVNYMMAKESVKS 157


>gi|71275876|ref|ZP_00652159.1| Tyrosyl-tRNA synthetase, class Ib [Xylella fastidiosa Dixon]
 gi|170729376|ref|YP_001774809.1| tyrosyl-tRNA synthetase [Xylella fastidiosa M12]
 gi|71163253|gb|EAO12972.1| Tyrosyl-tRNA synthetase, class Ib [Xylella fastidiosa Dixon]
 gi|167964169|gb|ACA11179.1| Tyrosine--tRNA ligase [Xylella fastidiosa M12]
          Length = 418

 Score =  107 bits (267), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 96/385 (24%), Positives = 174/385 (45%), Gaps = 30/385 (7%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D T+  LH GH   L  +   Q  GH+ + L+G  T +IGDP+ ++ +R+ +  +++ 
Sbjct: 39  GFDPTSPDLHLGHTVLLNKMRQFQDLGHQVVFLIGDFTGMIGDPTGKNVTRKPLSREDVL 98

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
            N       +   +     +T   +  N  W   +  +D+++ + +  +V RML  +   
Sbjct: 99  AN----ASTYEDQVFKVLDRTLTEVRFNSEWFGKMSAVDMIK-LAAQHTVARMLERDDFA 153

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R   +  +   EF Y ++Q YD + L  +    +++GG+DQ  N++ G  L E    P 
Sbjct: 154 KRFASQHPIVIHEFLYPLIQGYDSIALRAD----VELGGTDQKFNLLMGRALQEHHGQPP 209

Query: 221 LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTL 279
              LT PLL    G  KM K+L   I + +    P +       I D D++     L + 
Sbjct: 210 QIVLTMPLLEGLDGVAKMSKSLGNYIGIKE---PPIDIVTKTMKIGD-DLMWRWIELLSF 265

Query: 280 PMSEIDRMA---KLQGKEIN--EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQ 334
            +S  + +A    +   E+N  E K  +A E+ +  +    AEKA            ++ 
Sbjct: 266 KISAAEAVALREAVAKSELNPREVKLRLAHELVSRFYDNAAAEKAIAGWQAVVTGQGNNN 325

Query: 335 HMP--TISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
            +P   I++  D    G+ L+ L+ K+G A S +EA R LK  A++++  ++ +  L   
Sbjct: 326 LLPLQKINVPAD----GVRLVALLTKSGLAPSNSEAMRKLKERAVRVDGIVVDDAHLHF- 380

Query: 393 LQDFDSTGNIKLSFGKKNHIICHLC 417
           +  F+      +  GK+N I   L 
Sbjct: 381 VPGFEGL----IQIGKRNFIKVRLV 401


>gi|254495998|ref|ZP_05108904.1| tyrosyl-tRNA synthetase [Legionella drancourtii LLAP12]
 gi|254354786|gb|EET13415.1| tyrosyl-tRNA synthetase [Legionella drancourtii LLAP12]
          Length = 398

 Score =  107 bits (267), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 93/358 (25%), Positives = 163/358 (45%), Gaps = 30/358 (8%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   L  L   Q+ GH+ I L+G  T++IGDP+ ++ +R  +  + + 
Sbjct: 39  GFDPTAPDLHLGHTVLLNKLRQFQQFGHEVIFLIGDFTAMIGDPTGKNVTRMPLSQESVL 98

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           EN +  +       K    +   +  N++ WL     +DL+R + +  +V RML  +   
Sbjct: 99  ENAKTYQ---EQVFKILDPQKTTVAFNSQ-WLGQFTAVDLIR-LAATHTVARMLERDDFN 153

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R    Q ++  EF Y +LQ YD V L  +    ++ GG+DQ  N++ G +L +      
Sbjct: 154 KRYTSGQPIAIHEFLYPLLQGYDSVALKAD----VEFGGTDQKFNLLMGRELQKHYGHEP 209

Query: 221 LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQ------YWRNIDDADVVSF- 272
              + +PL+    G  KM K+L   I +N+  T  +           WR I   +++SF 
Sbjct: 210 QVIMMTPLIEGLDGVKKMSKSLDNYIGINEPATDMFGKIMSVSDELMWRYI---NLLSFK 266

Query: 273 -AKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSI 331
             + +  L  S ++      G    + K   A EI    H + +AE+     +  F   I
Sbjct: 267 TGQEIQALKQSVVE------GANPRDIKIDFAKEIVARFHDQGQAEQVHKDFIARFQKGI 320

Query: 332 HSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKL 389
               +  +SI  +E    + L  L+ +     ST+E+ R +K  A+K+++  + +  L
Sbjct: 321 IPADLEEVSIISEE---PIPLAQLLKQMNLTQSTSESIRMVKQGAVKVDSEKVEDPAL 375


>gi|93359589|gb|ABF13323.1| tyrosyl-tRNA synthetase [Streptococcus vestibularis]
          Length = 206

 Score =  107 bits (267), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 65/206 (31%), Positives = 105/206 (50%), Gaps = 19/206 (9%)

Query: 223 ALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMS 282
            +T PL+T ++G K GK+   A+WL+   T+PY  +Q+W N+ D D V F K  T L + 
Sbjct: 4   VITVPLITDSTGKKFGKSEGNAVWLDATKTTPYEMYQFWLNVMDDDAVRFLKIFTFLSLE 63

Query: 283 EIDRMAKL--QGKEINEAKKIIATEITTMVHGREEAEKAATAAMECF----------DMS 330
           EI+ + K   Q +    A+K++A E+ T+VHG+E  E+A     + F          D+ 
Sbjct: 64  EIEEIGKEFDQARHQRLAQKVLAREVVTLVHGKEAYEQAVHITEQLFAGNLKALSARDLK 123

Query: 331 IHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQ 390
           +    +PT  IS DE    + ++ L+V A  + S  +AR  +++ AI IN   + +  L 
Sbjct: 124 VALNGVPTYEISADE---NLNIVELLVNAKISPSKRQAREDVQNGAIYINGERVQD--LD 178

Query: 391 IKLQDFDSTGN--IKLSFGKKNHIIC 414
             L D D   N    +  GKK + + 
Sbjct: 179 YTLSDTDKIDNEITVIRRGKKKNFVL 204


>gi|15807614|ref|NP_296353.1| tyrosyl-tRNA synthetase [Deinococcus radiodurans R1]
 gi|81550553|sp|Q9RR63|SYY_DEIRA RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|6460463|gb|AAF12170.1|AE002092_8 tyrosyl-tRNA synthetase [Deinococcus radiodurans R1]
          Length = 411

 Score =  107 bits (267), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 95/356 (26%), Positives = 160/356 (44%), Gaps = 19/356 (5%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D T   LH GH   L  +   Q  GHK I L+G  T+ IGDPS + ++R  +  +E 
Sbjct: 46  LGADPTRPDLHLGHAVILRKMRQFQDLGHKVIMLIGDFTATIGDPSGKSKTRPPLSLEEA 105

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLN-NETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
           + N E         ++    + +AL +  N  WL  + Y D++  + + ++V R+L  + 
Sbjct: 106 RANAESYLAQCRLILRQ---EPEALEIRYNSEWLEQLGYKDII-GLAAKYTVARILERDD 161

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
              RL     +S  E  Y + Q YD V L  +    +++GG+DQ  N + G  L      
Sbjct: 162 FTKRLSAGTPISMHELLYPLTQGYDSVALHAD----VELGGTDQLFNNLVGRALQRDYGQ 217

Query: 219 PKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT 277
                LT PLL    GT KM K+L   I L  E   P+  +     + D  + ++   LT
Sbjct: 218 EAQVVLTLPLLVGLDGTEKMSKSLDNYIGLTDE---PHAMFAGLMKVPDPLLDNYFTLLT 274

Query: 278 TLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMP 337
            LP   I+ +  L G  +  A + +A E+    H   + + AA A            ++P
Sbjct: 275 DLPRERIEEL--LAGHPVA-AHRELAREVVRAFHPDADLD-AAEARFRSVAKGGIPDNIP 330

Query: 338 TISISKDEVSRG--MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
            +S+   E++    + +  L+V AG   S   AR+ +++  +K+     S+ + Q+
Sbjct: 331 AVSVPASELNEQGHVSMAKLVVLAGLEPSNGAARKLIQNRGLKLGGETYSDPQGQL 386


>gi|283458441|ref|YP_003363066.1| tyrosyl-tRNA synthetase [Rothia mucilaginosa DY-18]
 gi|283134481|dbj|BAI65246.1| tyrosyl-tRNA synthetase [Rothia mucilaginosa DY-18]
          Length = 211

 Score =  107 bits (267), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 68/208 (32%), Positives = 104/208 (50%), Gaps = 17/208 (8%)

Query: 223 ALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMS 282
           A+ +PL+T + GTK GK+   AIWLN +M SPY F+Q+W N  DADV+   K  T L  +
Sbjct: 8   AIGTPLITNSDGTKFGKSEGNAIWLNPQMCSPYAFYQFWLNTADADVLDRLKVFTFLTRA 67

Query: 283 EIDRMAKLQGKEI--NEAKKIIATEITTMVHGREEAEKAATAAMECF---------DMSI 331
           EI   A+   KE    EA+K +A  +T++VHG E  ++A  A+   F         + ++
Sbjct: 68  EIAEFAEKVEKEPFKREAQKTLAYLVTSLVHGTEATDQAVAASEALFGKGDFAALDEATL 127

Query: 332 HS--QHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKL 389
            S    +P+  +  D     + +++++ + GFA S +EARR LK     +N   +  E  
Sbjct: 128 ESVVAELPSAKLPADR----LDMISVLTELGFAKSNSEARRILKEGGASVNGVKVQGEDA 183

Query: 390 QIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            I   D        +  GKKN     L 
Sbjct: 184 AISKDDLLHGRFAMVRRGKKNQGAVELV 211


>gi|297181132|gb|ADI17329.1| tyrosyl-tRNA synthetase [uncultured Oceanospirillales bacterium
           HF0070_21F08]
          Length = 397

 Score =  107 bits (266), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 94/361 (26%), Positives = 165/361 (45%), Gaps = 36/361 (9%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   +  L   Q+ GH  + L+G  T +IGDP+ +  +R  +  +EI+
Sbjct: 39  GFDPTAPDLHLGHTVLINKLRQFQELGHHVMFLIGDFTGMIGDPTGKSATRPPLTPEEIE 98

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
            N E  K     F      KT+ +   N TW+  +    +++ + S ++V RML  +   
Sbjct: 99  RNAETYKE--QVFKILDPEKTEVVF--NSTWMNQVGAAGMIK-LASQYTVARMLERDDFD 153

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R +  Q ++  EF Y ++Q YD V +    +  +++GG+DQ  N++ G  L +      
Sbjct: 154 KRYRANQPIAVHEFLYPLVQGYDSVAM----EADVELGGTDQKFNLLMGRTLQKAYGQAP 209

Query: 221 LFALTSPLLTTASGT-KMGKTLSGAIWLN--------KEMTSPYNF-WQYWRNIDDADVV 270
              LT P+L    G  KM K+L   + +N        K ++ P +  W+Y+  +      
Sbjct: 210 QICLTMPILEGLDGVQKMSKSLKNYVGVNDAPGEMYRKLLSIPDDMTWRYYELLSGLSNE 269

Query: 271 SFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMS 330
           +  +R      +E DR+   Q     EAKK  A E+ T  HG   A+ A ++A     + 
Sbjct: 270 ALEER-----KAEADRLGSPQ-----EAKKAFALEMVTRFHGEAAAQAAPSSAGNLTSLG 319

Query: 331 IHSQHMPTISI---SKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNE 387
               ++P + +     DEV     ++ L+  AG A +   A+      A+ ++   ++ E
Sbjct: 320 AIPDNVPEVEVVLEDGDEVH----VVPLLRLAGLAQNGKAAKYVFGRGAVYVDGQQLTEE 375

Query: 388 K 388
           +
Sbjct: 376 R 376


>gi|189219580|ref|YP_001940221.1| Tyrosyl-tRNA synthetase [Methylacidiphilum infernorum V4]
 gi|189186438|gb|ACD83623.1| Tyrosyl-tRNA synthetase [Methylacidiphilum infernorum V4]
          Length = 386

 Score =  107 bits (266), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 103/385 (26%), Positives = 170/385 (44%), Gaps = 40/385 (10%)

Query: 19  HQISNPRELDILCS-QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGG 77
            Q+    EL+ L S    +    G D T+ +LH GH   L+ L   Q  GH+ + ++G  
Sbjct: 13  EQVVTTEELEKLLSLDRRLRIKFGVDPTSPNLHLGHAVSLLKLRQFQDFGHQVLLVIGDF 72

Query: 78  TSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKY 137
           T+ IGDPS R+ +R ++  ++I  N    K       K    +   +  N E W   +  
Sbjct: 73  TASIGDPSGRNSTRPVISREQILNN---AKTYTDQAFKILDRERTEIFFNGE-WFNEMSA 128

Query: 138 IDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQM 197
             LL  +    +VN +L  +    R+ ++QS+   EF Y +LQA+D V++  +    +++
Sbjct: 129 ERLLF-LARRVTVNHLLHRQDFHDRISKDQSIFLHEFFYPLLQAWDSVKICAD----VEI 183

Query: 198 GGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYN 256
           GG DQ  N++ G D  +         +T P+L    GT KM K+L   I L     SP  
Sbjct: 184 GGKDQIFNMLLGRDFQKDEGMTPQVVMTLPILEGLDGTKKMSKSLGNDIGLT---DSPKE 240

Query: 257 FWQYWRNIDDA-----DVVSFAKRLTTL--PMSEIDRMAKLQGKEINEAKKIIATEITTM 309
            +    +I DA      +V F ++L  L  PM E               KK +A +I ++
Sbjct: 241 MFGKTMSISDALMKRWFLVLFGEQLDPLCNPMEE---------------KKRLAEKIVSL 285

Query: 310 VHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEAR 369
            + +EEA KA       F      + MP  S  +    + M ++ L+V  G   S +EAR
Sbjct: 286 FYSKEEALKARNEFERIFSRREIPEEMPKFSFPQ----KTMPIVELLVAVGAVKSKSEAR 341

Query: 370 RHLKSNAIKINNSIISNEKLQIKLQ 394
           R +    +      +++    I+L+
Sbjct: 342 RLISQGGVDFQGERVTDVHKVIELK 366


>gi|93359602|gb|ABF13332.1| tyrosyl-tRNA synthetase [Streptococcus salivarius]
          Length = 208

 Score =  107 bits (266), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 65/206 (31%), Positives = 105/206 (50%), Gaps = 19/206 (9%)

Query: 223 ALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMS 282
            +T PL+T ++G K GK+   A+WL+   T+PY  +Q+W N+ D D V F K  T L + 
Sbjct: 6   VITVPLITDSTGKKFGKSEGNAVWLDATKTTPYEMYQFWLNVMDDDAVRFLKIFTFLSLE 65

Query: 283 EIDRMAKL--QGKEINEAKKIIATEITTMVHGREEAEKAATAAMECF----------DMS 330
           EI+ + K   Q +    A+K++A E+ T+VHG+E  E+A     + F          D+ 
Sbjct: 66  EIEEIGKEFDQARHQRLAQKVLAREVVTLVHGKEAYEQAVHITEQLFAGNLKALSARDLK 125

Query: 331 IHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQ 390
           +    +PT  IS DE    + ++ L+V A  + S  +AR  +++ AI IN   + +  L 
Sbjct: 126 VALNGVPTYEISADE---NLNIVELLVNAKISPSKRQAREDVQNGAIYINGERVQD--LD 180

Query: 391 IKLQDFDSTGN--IKLSFGKKNHIIC 414
             L D D   N    +  GKK + + 
Sbjct: 181 YTLSDTDKIDNEITVIRRGKKKNFVL 206


>gi|289666308|ref|ZP_06487889.1| tyrosyl-tRNA synthetase [Xanthomonas campestris pv. vasculorum
           NCPPB702]
 gi|289671118|ref|ZP_06492193.1| tyrosyl-tRNA synthetase [Xanthomonas campestris pv. musacearum
           NCPPB4381]
          Length = 403

 Score =  107 bits (266), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 100/378 (26%), Positives = 170/378 (44%), Gaps = 30/378 (7%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   L  +   Q+ GH+ I L+G  T +IGDPS ++ +R+ +  +++ 
Sbjct: 39  GFDPTAPDLHLGHTVLLNKMRQFQQLGHQVIFLIGDFTGMIGDPSGKNATRKPLSREDVL 98

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
            N    +       K    +   +  N+E W   +   D+++ + +  +V RML  +   
Sbjct: 99  ANARTYE---EQVFKILDRERTEVRFNSE-WFGQMSAADMIK-LSAQHTVARMLERDDFA 153

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R   +Q ++  EF Y ++Q YD V L  +    +++GG+DQ  N++ G  L E      
Sbjct: 154 KRFGSQQPIAIHEFLYPLVQGYDSVALKAD----VELGGTDQKFNLLMGRGLQEHYGQAP 209

Query: 221 LFALTSPLLTTASGT-KMGKTLSGAIWLNKEM------TSPYNFWQYWRNIDDADVVSFA 273
              LT PLL    G  KM K+L   I +N+        T        WR I   D++SF 
Sbjct: 210 QIVLTMPLLEGLDGVAKMSKSLGNYIGINEPAIDIVTKTMKIGDELTWRWI---DLLSFD 266

Query: 274 KRLT-TLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIH 332
             +   L + E     +L  +E+   K  +A E+ T  H    AE+A             
Sbjct: 267 ISVAEALRLKEQVVSGELHPREV---KLRLARELATRFHDAATAEQAIAGWHAVVTGQGD 323

Query: 333 SQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
           +  +P   I     + G+ + +L+  AG   S +EA R LK  A++I+  ++ +   ++ 
Sbjct: 324 TSLLPLQEILVP--AEGLRIASLLTTAGLTPSNSEATRKLKERAVRIDGEVMEDAS-RVF 380

Query: 393 LQDFDSTGNIKLSFGKKN 410
            Q F+      +  GK+N
Sbjct: 381 TQGFEGL----IQVGKRN 394


>gi|260771826|ref|ZP_05880744.1| tyrosyl-tRNA synthetase 2 (Tyrosine--tRNA ligase 2) (TyrRS 2)
           [Vibrio metschnikovii CIP 69.14]
 gi|260613118|gb|EEX38319.1| tyrosyl-tRNA synthetase 2 (Tyrosine--tRNA ligase 2) (TyrRS 2)
           [Vibrio metschnikovii CIP 69.14]
          Length = 396

 Score =  107 bits (266), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 88/352 (25%), Positives = 161/352 (45%), Gaps = 20/352 (5%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  L   Q  GH    L+G  T ++GDP+ ++ +R  +  +++
Sbjct: 38  LGADPTAPDIHLGHTVILNKLRTFQDLGHDVTFLIGDFTGMVGDPTGKNTTRPPLTREDV 97

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
             N E  K      +     K   +  N+E WL  +    ++R + +  +V RML  +  
Sbjct: 98  LRNAETYKQQVFKILDPAKTK---IQFNSE-WLSELGAEGMIR-LAANQTVARMLERDDF 152

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
           + R    Q ++  EF Y +LQ YD V +    +  +++GG+DQ  N++ G +L +     
Sbjct: 153 KKRYTGGQPIAIHEFMYPLLQGYDSVAM----ETDVELGGTDQKFNLLMGRELQKSHGQK 208

Query: 220 KLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               L  PLL    G  KM K+    I +++   +P   +    +I D  + S+ + L+ 
Sbjct: 209 PQVVLMMPLLVGLDGEKKMSKSAHNYIGVSE---APSEMFGKIMSISDDLMWSYYELLSF 265

Query: 279 LPMSEIDRMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM 336
            P++E+++       G    + K ++A EI    H + +A+ A    +  F        M
Sbjct: 266 RPLAEVEQFKADVANGANPRDVKILLAKEIIARFHSQADADAAEQEFINRFQKGALPDEM 325

Query: 337 PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEK 388
           P  + ++     G+ +  L+ +AG   ST++A R +K  A K +   + + K
Sbjct: 326 PEFTFAQ-----GIAIANLLKEAGLVGSTSDAMRMVKQGAAKQDGEKLDDAK 372


>gi|153003961|ref|YP_001378286.1| tyrosyl-tRNA synthetase [Anaeromyxobacter sp. Fw109-5]
 gi|152027534|gb|ABS25302.1| tyrosyl-tRNA synthetase [Anaeromyxobacter sp. Fw109-5]
          Length = 416

 Score =  107 bits (266), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 102/369 (27%), Positives = 164/369 (44%), Gaps = 47/369 (12%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   L  +   Q+ GH  I L+G  T +IGDP+ R+ +R  +  ++I 
Sbjct: 51  GFDPTAPDLHLGHTVLLSRMRRFQQFGHTVIFLIGDFTGLIGDPTGRNSTRPPLTPEQIA 110

Query: 101 ENIEKIKG-IFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           +N E  K  +F       T      +  N  WL ++ + D++R + S ++V RML  +  
Sbjct: 111 QNAETYKKQVFKILDPAATE-----VRYNSEWLGAMGFADVIR-LASRYTVARMLERDDF 164

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
           + R      +S  EF Y + QAYD V L  +    +++G SDQ  N++ G  +    +  
Sbjct: 165 KKRYTGNVPISVHEFLYPLAQAYDSVALKAD----VELGSSDQLFNLLVGRAIMPDYQLT 220

Query: 220 KLFALTSPLLTTAS-----------GTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDAD 268
               LT P+L               G KM K+L   + + +   +P   +    ++ D  
Sbjct: 221 PQIVLTGPILEGLDAKLDPESRRIVGNKMSKSLGNYVGVAE---APEEQFGKLMSVSDDL 277

Query: 269 VVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFD 328
           +  + + L+    +EI   A L+     +AK  +A EI T  HG +    AAT A E F 
Sbjct: 278 MWRYYELLSDRTSAEI---AALRAGHPKDAKIALAKEIVTRFHGAD----AATRAEEHFA 330

Query: 329 MSIHSQHMPTISISKDEV-SRGMGL--------LTLIVKAGFATSTNEARRHLKSNAIKI 379
                + +P      DEV  R + L          L+  A    S +EARR +    + +
Sbjct: 331 QVHARREVP------DEVEERAVALDGQAALPLARLLADAKVVASGSEARRLIAQGGVSV 384

Query: 380 NNSIISNEK 388
           N   +S+EK
Sbjct: 385 NGERVSDEK 393


>gi|319795927|ref|YP_004157567.1| tyrosyL-tRNA synthetase [Variovorax paradoxus EPS]
 gi|315598390|gb|ADU39456.1| tyrosyl-tRNA synthetase [Variovorax paradoxus EPS]
          Length = 402

 Score =  107 bits (266), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 95/363 (26%), Positives = 170/363 (46%), Gaps = 36/363 (9%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  +  LQ  GH+ I L+G  TS IGDPS R+ +R  +  ++I
Sbjct: 45  LGLDPTAPDIHIGHTVVLNKMRQLQDLGHRVIFLIGDFTSTIGDPSGRNNTRPPLTREQI 104

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           + N +      S  +     KT+  +  N  W   +    ++ ++ + ++V RM+  +  
Sbjct: 105 EANAQTYYKQASLVLD--PEKTE--IRYNSEWSDPLGARGMI-QLAAKYTVARMMERDDF 159

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R K  QS+S  EF Y ++Q YD V L  +    L++GG+DQ  N++ G  L +     
Sbjct: 160 NKRFKAGQSISVHEFLYPLMQGYDSVALKSD----LELGGTDQKFNLLVGRHLQQEYGQE 215

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRL-- 276
               LT PLL    G  KM K+    I ++++  + +           A V+S +  L  
Sbjct: 216 PQCILTMPLLEGLDGVEKMSKSKHNYIGISEDANTMF-----------AKVLSISDDLMW 264

Query: 277 ---TTLPMSEIDRMAKLQ-----GKEINEAKKIIATEITTMVHGREEAEKAATAAMECFD 328
              T L    ++++  L+     G+   +AK  +A EIT   H    AE A    +    
Sbjct: 265 RWYTLLSFQSLEQIEALKAEIAGGRNPKDAKVALAKEITARFHSAAAAETAEQDFVNRSK 324

Query: 329 MSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEK 388
             +  + +P +S+S       +G+  L+ +A  A+S  +  R +    +++++ +IS++ 
Sbjct: 325 GGVPDE-IPEVSLS----GAPLGIGQLLKQANLASSAGDGNRLIDGGGVRVDSVVISDKG 379

Query: 389 LQI 391
           L++
Sbjct: 380 LKL 382


>gi|289642116|ref|ZP_06474268.1| tyrosyl-tRNA synthetase [Frankia symbiont of Datisca glomerata]
 gi|289508079|gb|EFD29026.1| tyrosyl-tRNA synthetase [Frankia symbiont of Datisca glomerata]
          Length = 467

 Score =  106 bits (265), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 97/358 (27%), Positives = 159/358 (44%), Gaps = 43/358 (12%)

Query: 38  AYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQ 97
           A  G D T   +H GH   +++L   Q+ GH+ + ++G  T+ IGDPS R + R  +  +
Sbjct: 83  AKFGIDPTGHEVHLGHAVPMLILSRFQRMGHEVVFIVGDVTAKIGDPSGRSDERPALTDE 142

Query: 98  EIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFE 157
           +I  N+   +   + F  +    T A    N  WL  +K   L+ EI +   V+  L  E
Sbjct: 143 DIVRNLATYREQVAPFFDF----TRARFRRNGDWLREVKLPQLI-EIAAQIPVSMSLQRE 197

Query: 158 SVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNI-ICGIDLGERL 216
             R RL   Q LS  E  Y ++ A D VE+  N D  L++GG DQ+ N+ +C   +  R 
Sbjct: 198 DFRKRLDAGQGLSLAEVLYSVVMALDSVEI--NTD--LEVGGIDQFLNMQMCRHVMHIRG 253

Query: 217 KTPKLFALTSPLL-TTASGTKMGKTLSGAIWLN--------KEMTSP----YNFWQYWRN 263
           + P+L   TS +  T  +G KM K+    + L         K M+ P      ++Q    
Sbjct: 254 QVPELVVATSLIEGTDGTGAKMSKSRGNYVPLTAPAGEIFGKIMSVPDRLVTPYFQALSE 313

Query: 264 IDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAA 323
             D+++    +RL    +  +D             KKI+A E+T  VHG + A KA    
Sbjct: 314 WLDSELAVAEERLAAGSLHPMD------------LKKILAGEVTAAVHGVDAAMKAREEF 361

Query: 324 MECFDMSIHS--QHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKI 379
           +  F        +++P ++        G  +   +   GFA S  + RR  + N +++
Sbjct: 362 VARFSRRAFGDVENLPEVA------DLGQSVTDAVKALGFARSNGDVRRVAQQNGLRL 413


>gi|186684000|ref|YP_001867196.1| tyrosyl-tRNA synthetase [Nostoc punctiforme PCC 73102]
 gi|186466452|gb|ACC82253.1| tyrosyl-tRNA synthetase [Nostoc punctiforme PCC 73102]
          Length = 439

 Score =  106 bits (265), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 88/348 (25%), Positives = 157/348 (45%), Gaps = 23/348 (6%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D T + +H GH   +  L   Q  GH  + ++G  T+ IGDP+ + E RR +   ++
Sbjct: 86  LGIDPTGTDIHLGHSIPVRKLRAFQDAGHIAVLIIGDFTARIGDPTGKSEVRRQLTEADV 145

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
            +N +         + + T     +  N+E WL  +    +L E+ S  +V +ML+ E  
Sbjct: 146 AQNAQTYLDQVRPILDFDTPGRLEVRYNSE-WLSGLNLEKIL-ELLSTMTVGQMLAKEGF 203

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R K+E  +   EF Y ++Q +D V +    +  +++GG+DQ  NI  G DL       
Sbjct: 204 ADRYKKENPIFIHEFLYPLMQGFDSVAV----EADVELGGTDQKFNIAVGRDLQRHFGQK 259

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
             F +  P+L    G  KM K+L   I L++    P   +Q  + + D  +  + + LT 
Sbjct: 260 PQFGMLLPILIGTDGVQKMSKSLGNYIGLSEH---PGQKYQKLQGVPDNLLEQYFELLTD 316

Query: 279 LPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPT 338
           LP+  +    +       + + ++A E+    HG    E AA  A E          +P 
Sbjct: 317 LPLDNLPENPR-------DRQTLLAWEVVKQYHG----ETAAQEAKEAAQSGGKEGAVPE 365

Query: 339 ISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISN 386
            S++  E+S    L  ++   G   ST E +R ++   ++I+   I++
Sbjct: 366 FSLA--EISHPAKLAYILNVTGLCKSTGEGKRKIQEGGVRIDGDRITD 411


>gi|77359501|ref|YP_339076.1| tyrosyl-tRNA synthetase II [Pseudoalteromonas haloplanktis TAC125]
 gi|115305795|sp|Q3ILJ9|SYY2_PSEHT RecName: Full=Tyrosyl-tRNA synthetase 2; AltName:
           Full=Tyrosine--tRNA ligase 2; Short=TyrRS 2
 gi|76874412|emb|CAI85633.1| Tyrosyl-tRNA synthetase II [Pseudoalteromonas haloplanktis TAC125]
          Length = 399

 Score =  106 bits (265), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 97/387 (25%), Positives = 181/387 (46%), Gaps = 31/387 (8%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           IL E   + ++ + ++L I           G+D TA  LH GH   +  +   Q  GH+ 
Sbjct: 17  ILIEDELVEKLKSGKKLKIKA---------GFDPTAPDLHLGHTVLINKMKTFQDLGHEV 67

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           + L+G  T +IGDP+ ++ +R+ +  +++  N E  K     F      KT      N T
Sbjct: 68  VFLIGDFTGMIGDPTGKNVTRKPLTREDVLANAETYKE--QVFKILDPAKTTVAF--NST 123

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           W+ ++    +++ + +  +V RML  +  + R    QS++  EF Y ++Q +D V L   
Sbjct: 124 WMENLGAAGMIK-LAARQTVARMLERDDFKKRYASGQSIAIHEFLYPLVQGWDSVAL--- 179

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNK 249
            +  +++GG+DQ  N++ G +L +         + +PLL    G  KM K+L   I +  
Sbjct: 180 -EADVELGGTDQRFNLLMGRELQKDEGQKPQTVIMTPLLEGTDGVQKMSKSLGNYIGITD 238

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIATEIT 307
              +P + +    +I D  +  +   L+ L ++ I+   +   QG    + K  +A E+ 
Sbjct: 239 ---APNDMFGKIMSISDVLMWRYYDLLSGLSIAGINAQKERVEQGTNPRDIKIELAKELI 295

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMP--TISISKDEVSRGMGLLTLIVKAGFATST 365
              H   +A+ A    ++ F        +P  T++I +D +     +  L+ +A    ST
Sbjct: 296 ARFHSEADAQAAHDDFIQRFQKKALPDEIPELTVTIEQDSIL----IANLLKEANLVAST 351

Query: 366 NEARRHLKSNAIKIN-NSIISNEKLQI 391
           +EA R +K  A+K+N    I++ KL+I
Sbjct: 352 SEAMRMIKQGAVKLNGEDKITDTKLEI 378


>gi|261212258|ref|ZP_05926544.1| tyrosyl-tRNA synthetase [Vibrio sp. RC341]
 gi|260838866|gb|EEX65517.1| tyrosyl-tRNA synthetase [Vibrio sp. RC341]
          Length = 395

 Score =  106 bits (265), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 95/353 (26%), Positives = 162/353 (45%), Gaps = 20/353 (5%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  L   Q  GH    L+G  T ++GDP+ ++ +R  +  +++
Sbjct: 38  LGADPTAPDIHLGHTVILNKLRTFQDLGHDVTFLIGDFTGMVGDPTGKNTTRPPLTREDV 97

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
             N E  K       K        +  N+E WL  +    ++R + S  +V RML  +  
Sbjct: 98  LRNAETYK---QQVFKILDPSKTKIQFNSE-WLSQLGAEGMIR-LASNQTVARMLERDDF 152

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
           + R    Q ++  EF Y +LQ YD V +    +  +++GG+DQ  N++ G +L +     
Sbjct: 153 KKRYNNGQPIAIHEFMYPLLQGYDSVAM----ETDVELGGTDQKFNLLMGRELQKSNGQK 208

Query: 220 KLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               L  PLL    G  KM K+    I +++   +P   +    +I D  + S+ + L+ 
Sbjct: 209 PQVVLMMPLLVGLDGEKKMSKSAHNYIGVSE---APSEMFGKIMSISDDLMWSYYELLSF 265

Query: 279 LPMSEIDRM-AKLQ-GKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM 336
            P+ EI +  A +Q G    + K ++A EI T  H   +A+ A    +  F      + M
Sbjct: 266 RPLEEIAQFKADVQNGTNPRDIKILLAKEIITRFHTAADADAAEQEFINRFQKGAMPEEM 325

Query: 337 PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKL 389
           P       E   G+ +  L+  AG   ST++A R +K  A+K++   + + KL
Sbjct: 326 PEF-----EFDAGIAISNLLKDAGLVGSTSDALRMIKQGAVKLDGEKLEDAKL 373


>gi|88858216|ref|ZP_01132858.1| Tyrosyl-tRNA synthetase II [Pseudoalteromonas tunicata D2]
 gi|88819833|gb|EAR29646.1| Tyrosyl-tRNA synthetase II [Pseudoalteromonas tunicata D2]
          Length = 400

 Score =  106 bits (265), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 108/395 (27%), Positives = 181/395 (45%), Gaps = 45/395 (11%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           IL E   I ++ + ++L I           G+D TA  LH GH   +  +   Q  GH+ 
Sbjct: 18  ILIEDELIEKLKSGKKLKIKA---------GFDPTAPDLHLGHTVLINKMKTFQDLGHEV 68

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           I L+G  T +IGDP+ ++ +R+ +  +++  N E  K     F      KT      N T
Sbjct: 69  IFLIGDFTGMIGDPTGKNVTRKPLTREDVLANAETYKE--QVFKILDPAKTTVAF--NST 124

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           W+  +    +++ + S  +V RML  +  + R    Q ++  EF Y ++Q +D V L   
Sbjct: 125 WMEKLGAAGMIK-LASNQTVARMLERDDFKKRYAGGQPIAIHEFLYPLVQGWDSVAL--- 180

Query: 191 YDCRLQMGGSDQWGNIICGIDL----GERLKTPKLFALTSPLLTTASGT-KMGKTLSGAI 245
            +  +++GG+DQ  N++ G +L    G++ +T     L  PLL    G  KM K+L   I
Sbjct: 181 -EADVELGGTDQRFNLLMGRELQKVEGQKPQT----VLMMPLLEGTDGVQKMSKSLGNYI 235

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ-----GKEINEAKK 300
            +     SP   +    +I D  +  +   L+ L    ID++A L+     G    + K 
Sbjct: 236 GIT---DSPTEMFGKIMSISDDLMWRYFDLLSAL---SIDQIAALKADVTAGTNPRDIKI 289

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMP--TISISKDEVSRGMGLLTLIVK 358
            +A E+    H   +AE A    +  F        +P  T+ I  D +S    +  L+ +
Sbjct: 290 NLAREMIARFHSEADAEAAYQDFINRFQKKALPDDIPEVTVQIEGDVIS----IANLLKE 345

Query: 359 AGFATSTNEARRHLKSNAIKIN-NSIISNEKLQIK 392
           A    ST+EA R +K  A+K+N    IS+ KL+I+
Sbjct: 346 ADLVASTSEAMRMIKQGAVKLNGEEKISDSKLEIQ 380


>gi|120612682|ref|YP_972360.1| tyrosyl-tRNA synthetase [Acidovorax citrulli AAC00-1]
 gi|120591146|gb|ABM34586.1| tyrosyl-tRNA synthetase [Acidovorax citrulli AAC00-1]
          Length = 410

 Score =  106 bits (265), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 97/364 (26%), Positives = 167/364 (45%), Gaps = 36/364 (9%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  +  LQ  GH+ I L+G  T++IGDPS R+ +R  +  ++I
Sbjct: 53  LGLDPTAPDIHIGHTVVLNKMRQLQDLGHQVIFLIGDFTTLIGDPSGRNSTRPPLTPEQI 112

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           + N E      S  +     KT+  +  N  W   +    ++ ++ + ++V RM+     
Sbjct: 113 KVNAETYYRQASMVLD--PAKTE--IRYNSEWCEPLGAAGMI-QLAAKYTVARMMERNDF 167

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R     S+S  EF Y +LQ YD V L  +    L++GG+DQ  N++ G  L +     
Sbjct: 168 HQRFTDGSSISLHEFLYPLLQGYDSVALRSD----LELGGTDQKFNLLMGRHLQQEYGQE 223

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRL-- 276
               LT PLL    G  KM K+    I + ++  + +           A V+S +  L  
Sbjct: 224 PQCILTMPLLVGLDGVDKMSKSKGNYIGITEDANTMF-----------AKVLSISDDLMW 272

Query: 277 ---TTLPMSEIDRMAKLQ-----GKEINEAKKIIATEITTMVHGREEAEKAATAAMECFD 328
              T L    +  +A L+     G+   +AK ++A EITT  H    A+ A         
Sbjct: 273 DWYTLLSFKSLAEIAALRQEVEGGRNPKDAKVMLAREITTRFHSAAAADAAEADFANRSK 332

Query: 329 MSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEK 388
             +  + +P +S+        +G+  L+ +A  A ST+EA R +    +++  S++S+  
Sbjct: 333 GGVPDE-IPEVSLE----GAPLGIGALLKQANLAPSTSEANRLIDGGGVRVEGSVVSDRG 387

Query: 389 LQIK 392
           L+++
Sbjct: 388 LKLE 391


>gi|124026461|ref|YP_001015576.1| tyrosyl-tRNA synthetase [Prochlorococcus marinus str. NATL1A]
 gi|123961529|gb|ABM76312.1| Tyrosyl-tRNA synthetase [Prochlorococcus marinus str. NATL1A]
          Length = 415

 Score =  106 bits (264), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 109/382 (28%), Positives = 178/382 (46%), Gaps = 35/382 (9%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D T + +H GH      L   Q  GH  I ++G  T+ IGDP+ + ++R  +   E+
Sbjct: 50  LGIDPTGTDIHIGHSILFRKLRAFQDAGHTAILIIGDFTARIGDPTGKSKTRIQLSKDEV 109

Query: 100 QEN----IEKI---KGIFSSFIKYGTGKTDALMLNNETWLCSI---KYIDLLREIGSFFS 149
           + N    +E++   K    S + + T     +  N+E WL ++   K I+LL    S  +
Sbjct: 110 EANALNYLEQLGLGKEPKDSLLDFSTPSRIEIRRNSE-WLENLNLSKVIELL----SNST 164

Query: 150 VNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICG 209
           V +ML+ E   +R K    +S  EF Y +LQ YD V  A N D   ++GG+DQ  NI  G
Sbjct: 165 VGQMLAKEDFSNRYKSGTPISLHEFLYPLLQGYDSV--AINSDV--ELGGTDQKFNIAMG 220

Query: 210 IDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDAD 268
            DL         F +  P+L    GT KM K+L   + +N++  S Y+  +    + D  
Sbjct: 221 RDLQRAFGQKPQFGMLLPILVGLDGTRKMSKSLDNIVGINEDSLSMYSKLE---KVPDDL 277

Query: 269 VVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFD 328
           V+++   LT   + E+    +       E +K +A +IT+   G E A+ A   + +   
Sbjct: 278 VLTYLNLLTNENLKELSSNPR-------EVQKFMALKITSNFKGIEAAKNAQFNSEKLVL 330

Query: 329 MSIHS-QHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNE 387
            +  S + +P  S+S   V+       L  K    +S++EARR +    ++I+   I + 
Sbjct: 331 GTKDSLEEIPEASVSN--VNFPAKAFYLFSKMEMCSSSSEARRQILGGGVRIDGEKIMDP 388

Query: 388 KLQIKLQDFDSTGNIKLSFGKK 409
            L+    D D  G I L  GKK
Sbjct: 389 NLEFHTPD-DLIGKI-LQVGKK 408


>gi|70732895|ref|YP_262666.1| tyrosyl-tRNA synthetase [Pseudomonas fluorescens Pf-5]
 gi|115305818|sp|Q4K517|SYY_PSEF5 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|68347194|gb|AAY94800.1| tyrosyl-tRNA synthetase [Pseudomonas fluorescens Pf-5]
          Length = 399

 Score =  106 bits (264), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 97/348 (27%), Positives = 155/348 (44%), Gaps = 18/348 (5%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   +  L   Q  GH+ I L+G  T +IGDPS +  +R  +  +++ 
Sbjct: 39  GFDPTAPDLHLGHTVLINKLRQFQDLGHQVIFLIGDFTGMIGDPSGKSATRPPLTREQVL 98

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           EN E  K     F      KT+     N TW+  +   D +R + S ++V RML  +   
Sbjct: 99  ENAETYKS--QVFKILDPAKTEVAF--NSTWMDKMGPADFIR-LTSQYTVARMLERDDFD 153

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R    Q ++  EF Y ++Q YD V L  +    +++GG+DQ  N++ G +L        
Sbjct: 154 KRYSTNQPIAIHEFLYPLVQGYDSVALRAD----VELGGTDQKFNLLMGRELQRGYGQEA 209

Query: 221 LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTL 279
              LT PLL    G  KM K+L   + + +   +P   +    +I DA +  + + L+  
Sbjct: 210 QCILTMPLLEGLDGVKKMSKSLGNYVGIQE---APGVMYGKLVSIPDALMWRYFELLSFR 266

Query: 280 PMSEID--RMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMP 337
            M EI+  +     G    + K  +A EI    HG E A  A  AA            +P
Sbjct: 267 SMDEINAFKADVDAGANPRDIKIKLAEEIVARFHGEEAAANAHRAAGNRMKDGELPDDLP 326

Query: 338 TISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIIS 385
            I +   E    M +  ++ KAG   +   AR  L S  ++++  ++ 
Sbjct: 327 EIELVAAE---DMPIAAVLNKAGLVKNAAMARDLLGSGGVRVDGEVVD 371


>gi|119472227|ref|ZP_01614406.1| Tyrosyl-tRNA synthetase II [Alteromonadales bacterium TW-7]
 gi|119445045|gb|EAW26340.1| Tyrosyl-tRNA synthetase II [Alteromonadales bacterium TW-7]
          Length = 399

 Score =  106 bits (264), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 101/392 (25%), Positives = 183/392 (46%), Gaps = 39/392 (9%)

Query: 10  SILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
            IL E   + ++ + ++L I           G+D TA  LH GH   +  +   Q  GH+
Sbjct: 16  EILIEDELVEKLKSGKKLKIKA---------GFDPTAPDLHLGHTVLINKMKTFQDLGHE 66

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
            I L+G  T +IGDP+ ++ +R+ +  +++  N E  K     F      KT      N 
Sbjct: 67  VIFLIGDFTGMIGDPTGKNVTRKPLTREDVLANAETYKE--QVFKILDPAKTTVAF--NS 122

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
           TW+  +    +++ + +  +V RML  +  + R    Q ++  EF Y ++Q +D V L  
Sbjct: 123 TWMEKLGAAGMIK-LAANQTVARMLERDDFKKRYNGGQPIAIHEFLYPLVQGWDSVAL-- 179

Query: 190 NYDCRLQMGGSDQWGNIICGIDL----GERLKTPKLFALTSPLLTTASGT-KMGKTLSGA 244
             +  +++GG+DQ  N++ G +L    G++ +T     L  PLL    G  KM K+L   
Sbjct: 180 --ESDVELGGTDQRFNLLMGRELQKVEGQKPQT----VLMMPLLEGTDGVQKMSKSLGNY 233

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKII 302
           I +     +P + +    +I D  +  +   L+ L + +I    +   QG    + K  +
Sbjct: 234 IGITD---APNDMFGKVMSISDVLMWRYYDLLSGLSIEQIAAQKERVEQGTNPRDIKIEL 290

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMP--TISISKDEVSRGMGLLTLIVKAG 360
           A E+    H  E+A+ A    ++ F        +P  T++I++D +     +  L+ +A 
Sbjct: 291 AKELIARFHSEEDAQAAHNDFIQRFQKKALPDEIPELTVTIAEDTIL----IANLLKEAN 346

Query: 361 FATSTNEARRHLKSNAIKIN-NSIISNEKLQI 391
              ST+EA R +K  A+K+N    I++ KL+I
Sbjct: 347 LVASTSEAMRMIKQGAVKLNGEEKITDTKLEI 378


>gi|297172443|gb|ADI23416.1| tyrosyl-tRNA synthetase [uncultured gamma proteobacterium
           HF0770_33G18]
          Length = 374

 Score =  106 bits (264), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 93/361 (25%), Positives = 166/361 (45%), Gaps = 21/361 (5%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G+D TA  LH GH   +  +   Q  GH+ I ++G  T +IGDPS +  +R  +   EI
Sbjct: 13  VGFDPTAPDLHLGHTVVVNKMRQFQDFGHEIIFVIGDFTGMIGDPSGKSVTRPPLLPDEI 72

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           ++N    +       K    K   +  N+  W   +    L+R + + ++V R+L  +  
Sbjct: 73  EKNAVTYR---EQVFKILDPKKTRIEFNS-VWSNELGAEGLIR-LAARYTVARILERDDF 127

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
            +R +  + ++  E  Y ++Q YD V L    +  +++GG+DQ  N++ G +L ++    
Sbjct: 128 STRYRNREPIAIHELLYPLMQGYDSVAL----EADVELGGTDQKFNLLVGRELQKQYGQA 183

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               LT PLL    G  KM K+L   + +      P   +    +I D  +  + + L+ 
Sbjct: 184 PQIVLTVPLLEGLDGVQKMSKSLGNYVGIT---DLPEEMFGKLMSISDDLMWRYFELLSL 240

Query: 279 LPMSEIDRMA--KLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM 336
             +SE++++     QG    + K ++A EI    H    A +A     E F        M
Sbjct: 241 RNVSELEQLKIDAAQGMNPRDIKYMLAGEIVERFHSASHARRAK----EEFVNRFQKGAM 296

Query: 337 PTISISKDEVSRG--MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
           P   + K   S G  M +  +I +AG   ST+EA R L+  A++I+   +++   +I + 
Sbjct: 297 PARIVEKVVNSNGEDMPIARVIKEAGLVASTSEALRMLEQGAVRIDGERVTDRDRKIGVG 356

Query: 395 D 395
           D
Sbjct: 357 D 357


>gi|156975677|ref|YP_001446584.1| tyrosyl-tRNA synthetase [Vibrio harveyi ATCC BAA-1116]
 gi|156527271|gb|ABU72357.1| hypothetical protein VIBHAR_03412 [Vibrio harveyi ATCC BAA-1116]
          Length = 395

 Score =  106 bits (264), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 91/353 (25%), Positives = 163/353 (46%), Gaps = 20/353 (5%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH      L   Q+ GH+   L+G  T+++GDP+ ++ +R  +  +++
Sbjct: 38  LGADPTAPDIHLGHTVIFNKLRLFQELGHEVTFLIGDFTAMVGDPTGKNSTRPPLSREDV 97

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
             N E  K      +     K   +  N+E WL  +    ++R + +  +V RML  +  
Sbjct: 98  LRNAETYKEQVFKILDPAKTK---IQFNSE-WLSELGAEGMIR-LAANQTVARMLERDDF 152

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
           + R    Q ++  EF Y +LQ +D V +    +  +++GG+DQ  N++ G +L +     
Sbjct: 153 KKRYAGGQPIAIHEFMYPLLQGWDSVAM----ETDVELGGTDQKFNLLMGRELQKSHGQK 208

Query: 220 KLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               L  PLL    G  KM K+    I +++   +P   +    +I D  + S+ + L+ 
Sbjct: 209 PQVVLMMPLLVGLDGEKKMSKSSGNYIGISE---APSEMFGKIMSISDVLMWSYYELLSF 265

Query: 279 LPMSEIDRM-AKLQ-GKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM 336
            P+ EI +  A ++ GK   + K ++A EI    H   +A+ A    +  F  +     M
Sbjct: 266 RPLEEIAQFKADVEAGKNPRDIKVLLAKEIIARFHSEADADAAEQEFVNRFAKNQIPDEM 325

Query: 337 PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKL 389
           P       +   G  +  L+ +AG   ST+EA R +K  A KI    +++ K 
Sbjct: 326 PEF-----DFEAGTPVANLLKEAGLCASTSEAMRMVKQGAAKIEGEKVADAKF 373


>gi|71066524|ref|YP_265251.1| tyrosyl-tRNA synthetase [Psychrobacter arcticus 273-4]
 gi|115305820|sp|Q4FQ91|SYY_PSYA2 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|71039509|gb|AAZ19817.1| tyrosyl-tRNA synthetase [Psychrobacter arcticus 273-4]
          Length = 403

 Score =  106 bits (264), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 94/379 (24%), Positives = 180/379 (47%), Gaps = 27/379 (7%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           ILSE   + ++   R L I           G+D TA  LH GH   +  L   Q  GH+ 
Sbjct: 22  ILSEEDLVKKLKLNRPLRIKA---------GFDPTAPDLHLGHTVLINKLKHFQDLGHEI 72

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKI-KGIFSSFIKYGTGKTDALMLNNE 129
             L+G  T+ IGDPS ++ +R  +  ++I+ N E   + +F    K  T     ++ N+E
Sbjct: 73  YFLIGDYTAKIGDPSGKNSTRPPLTDEQIKANAETYAEQVFKILDKEKT----RVVFNSE 128

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
            W   +   D++ ++ S  +V+RML  +    R   +  ++  EF Y ++Q YD + L  
Sbjct: 129 -WFNDMSAADMI-QLASHQTVSRMLERDDFSKRYASQTPIAIHEFLYPLVQGYDSIALKA 186

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLN 248
           +    +++GG+DQ  N++ G  L  R    +   +T P+L    G  KM K+L+  + + 
Sbjct: 187 D----VELGGTDQTFNLLMGRTLQGRYGQEQQVCITVPILEGLDGVNKMSKSLNNYVGI- 241

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR-MAKLQ-GKEINEAKKIIATEI 306
               +P   +Q   ++ D  +  + + L+  PM E++  MA+++ G+   E K+I+A E+
Sbjct: 242 --YDAPGTMYQKLLSMPDTLIRRYFEFLSFKPMEEVENLMAEMEDGRNPQEIKRILAEEL 299

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
               H  + A  A  +A            +P +++   E    + +  ++ +A  A +++
Sbjct: 300 IERFHDADAAANAHKSAGNVLADGELPVDLPEVTLEL-EGQDALFITQILNQAALAKNSS 358

Query: 367 EARRHLKSNAIKINNSIIS 385
            A+  +K  A+K++  ++ 
Sbjct: 359 SAKDMIKRGAVKVDGEVVD 377


>gi|206895710|ref|YP_002247508.1| tyrosyl-tRNA synthetase [Coprothermobacter proteolyticus DSM 5265]
 gi|206738327|gb|ACI17405.1| tyrosyl-tRNA synthetase [Coprothermobacter proteolyticus DSM 5265]
          Length = 398

 Score =  106 bits (264), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 94/356 (26%), Positives = 169/356 (47%), Gaps = 17/356 (4%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D +A  LH GHL  L  L   Q+ GH+ + ++G  T+ IGDP+ R+++R  +  +E+
Sbjct: 41  LGADPSAPDLHLGHLVVLRKLRQFQEFGHRIVFIIGDFTACIGDPTGRNKTRPPLTEEEV 100

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           ++N E  +       K    +   +  N+E W   +   D++  + S ++V ++L  +  
Sbjct: 101 RKNAETYQ---EQVFKVLDPELVDIKFNSE-WNAPLSARDVILNLASRYTVAKLLERDDF 156

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R K    +   E  Y + QAYD V +  +    +++GG+DQ  N++ G DL +     
Sbjct: 157 NMRYKSGIPIYVHELLYPLFQAYDSVAIRAD----VELGGTDQVFNLLVGRDLQQSHGQE 212

Query: 220 KLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               +T PLL    G  KM K+L   +  N     P + +    +I D  + S+   LT 
Sbjct: 213 PQVVMTLPLLVGLDGEKKMSKSLGNYVAFND---PPKDMFGKLMSIPDDLMPSYFNLLTD 269

Query: 279 LPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPT 338
              +EI R+  L G    +AK  +A  IT+  +G EEA       +  F      ++M  
Sbjct: 270 YSENEIKRI--LSGHP-RDAKLKLAWTITSFFYGEEEASYEQEEFLRVFSRRELPEYMDA 326

Query: 339 ISISKDEVSRGMGLLT-LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL 393
             I     + G+  +T L+V  G A+S +EA+R +    +++N++ + +    ++L
Sbjct: 327 YEIET-LYNEGVRTITDLLVFIGAASSRSEAKRLVAGGGVQLNDTRVDDPMAPLQL 381


>gi|298243236|ref|ZP_06967043.1| tyrosyl-tRNA synthetase [Ktedonobacter racemifer DSM 44963]
 gi|297556290|gb|EFH90154.1| tyrosyl-tRNA synthetase [Ktedonobacter racemifer DSM 44963]
          Length = 407

 Score =  106 bits (264), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 92/358 (25%), Positives = 163/358 (45%), Gaps = 13/358 (3%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G D+TA  LH GH   L ++  +Q  GHK I L+G  T+ IGDP+ R++ R ++  +EI+
Sbjct: 45  GVDVTAPFLHLGHAVNLWMMRKMQDLGHKVIFLIGDFTTTIGDPTGRNKLRPIIPPEEIE 104

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
            N +         +++       +  N+E W   +   +LLR + S  + +R++  +  +
Sbjct: 105 ANAQAFIAQARMVLRFDDQHLLEIRRNSE-WYKDMPVQELLR-LLSMITHSRLIVRDMFQ 162

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            RLK+   +   E  Y +LQ YD   L    D  L + GSDQ  N + G    E L    
Sbjct: 163 LRLKQGLDIHMHELLYPVLQGYDSFAL----DSDLTIIGSDQLFNELMGRFYQEHLGQSP 218

Query: 221 LFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTL 279
              +T+ +     G  K  K+L   I L     SP + +     + D+ +V++ +  T +
Sbjct: 219 QVVITTKITPGIDGKAKQSKSLGNYIGLGH---SPRDKFGRAMKLPDSLIVTYFEIYTDI 275

Query: 280 PMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI 339
           PM +++ + +   +E  + K  +A EI    HG+E AE+      E F      + +P +
Sbjct: 276 PMIDVEEIGQRVEQEPMQCKLRLAYEIVKRYHGKEVAEQEFFWFQETFSARQTPEDIPEM 335

Query: 340 SISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
           ++ +  +   + LL L        S  E RR  +   +  N  ++   +  ++L D D
Sbjct: 336 TLERG-IQTPLELLKLFFNG--QKSNRELRRLCEQGGVSRNEEVLRQPEQMLELCDGD 390


>gi|264676689|ref|YP_003276595.1| tyrosyl-tRNA synthetase [Comamonas testosteroni CNB-2]
 gi|262207201|gb|ACY31299.1| tyrosyl-tRNA synthetase [Comamonas testosteroni CNB-2]
          Length = 410

 Score =  105 bits (263), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 103/381 (27%), Positives = 172/381 (45%), Gaps = 42/381 (11%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  +  LQ  GH+ I L+G  T++IGDPS R+ +R  + +++I
Sbjct: 53  LGLDPTAPDIHLGHTVVLNKMRQLQDLGHQVIFLIGDFTTLIGDPSGRNSTRPPLTAEQI 112

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           + N E     ++   K        +  N+E W   +    ++ ++ + ++V RM+     
Sbjct: 113 KVNAET---YYTQAAKVLDPARTEVRYNSE-WCDQLGARGMI-QLSAKYTVARMMERNDF 167

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
            +R     S+S  EF Y +LQ YD V L  +    L++GG+DQ  N++ G  L       
Sbjct: 168 HTRFTDGSSISLHEFLYPLLQGYDSVALKSD----LELGGTDQKFNLMMGRHLQAEYGQD 223

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRL-- 276
           +   LT PLL    G  KM K+ +  I + ++  + +           A V+S +  L  
Sbjct: 224 QQCVLTMPLLVGLDGVHKMSKSKNNYIGITEDANTMF-----------AKVLSISDELMW 272

Query: 277 ---TTLPMSEIDRMAKLQ-----GKEINEAKKIIATEITTMVHGREEAEKAATAAMECFD 328
              T L    +  +A L+     G     AK  +A EIT   H  E A+ A    +    
Sbjct: 273 DWYTLLSFKSLAEIAALKAEIEAGGNPKHAKVALAKEITARFHSAEAADAAEQDFINRSK 332

Query: 329 MSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEK 388
             I    +P IS+S       +G+  L+ +A  A ST EA R +    ++++ ++IS+  
Sbjct: 333 GGI-PDDIPEISLS----GAPLGIGALVKQANLAASTGEANRLIDGGGVRVDGNVISDRA 387

Query: 389 LQIKLQDFDSTGNIKLSFGKK 409
           L++        G   L  GK+
Sbjct: 388 LKL------DAGTFVLQVGKR 402


>gi|241766103|ref|ZP_04764014.1| tyrosyl-tRNA synthetase [Acidovorax delafieldii 2AN]
 gi|241363856|gb|EER59176.1| tyrosyl-tRNA synthetase [Acidovorax delafieldii 2AN]
          Length = 410

 Score =  105 bits (263), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 94/363 (25%), Positives = 173/363 (47%), Gaps = 34/363 (9%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  +  LQ  GH+ I L+G  TS+IGDPS R+ +R  +  ++I
Sbjct: 53  LGLDPTAPDIHIGHTVVLNKMRQLQDLGHQVIFLIGDFTSLIGDPSGRNSTRPPLTPEQI 112

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           + N E      S  +     +T+  +  N  W   +    ++ ++ + F+V RM+     
Sbjct: 113 KFNAETYYRQASMVLD--PARTE--IRYNSEWSEPLGATGMI-QLAAKFTVARMMERNDF 167

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R K    ++  EF Y ++Q YD V L  +    L++GG+DQ  N++ G  L +     
Sbjct: 168 HDRFKAGNPIAVHEFLYPLMQGYDSVALKSD----LELGGTDQKFNLLMGRHLQQEYGQE 223

Query: 220 KLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYN---------FWQYWRNIDDADV 269
               LT PLL    G  KM K+ +  I ++++  + Y           W+++       +
Sbjct: 224 PQCILTMPLLEGLDGIEKMSKSKNNYIGISEDANTMYAKVLSISDTLMWRWY------TL 277

Query: 270 VSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDM 329
           +SF     +L   E+ +     G+   +AK ++A EIT   H    AE A    +     
Sbjct: 278 LSF----KSLAEIEVLKAEVAGGRNPKDAKVLLAKEITARFHSAAAAEAAEQDFINRSKG 333

Query: 330 SIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKL 389
            +  + +P +++S       +G+  L+ +A  A ST+EA R ++   ++++ S++S++ L
Sbjct: 334 GVPDE-IPEVTLS----GAPLGIGALLKQANLAPSTSEANRLIEGGGVRVDGSVVSDKGL 388

Query: 390 QIK 392
           +++
Sbjct: 389 KLE 391


>gi|91228939|ref|ZP_01262836.1| tyrosyl-tRNA synthetase [Vibrio alginolyticus 12G01]
 gi|91187499|gb|EAS73834.1| tyrosyl-tRNA synthetase [Vibrio alginolyticus 12G01]
          Length = 395

 Score =  105 bits (263), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 90/353 (25%), Positives = 166/353 (47%), Gaps = 20/353 (5%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH      L   Q+ GH+   L+G  T+++GDP+ ++ +R  +  +++
Sbjct: 38  LGADPTAPDIHLGHTVIFNKLRLFQELGHEVTFLIGDFTAMVGDPTGKNTTRPPLSREDV 97

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
             N E  K      +     K   +  N+E WL  +    ++R + +  +V RML  +  
Sbjct: 98  LRNAETYKEQVFKILDPAKTK---IQFNSE-WLSELGAEGMIR-LAANQTVARMLERDDF 152

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
           + R    Q ++  EF Y +LQ +D V +    +  +++GG+DQ  N++ G +L +     
Sbjct: 153 KKRYAGGQPIAIHEFMYPLLQGWDSVAM----ETDVELGGTDQKFNLLMGRELQKSHGQK 208

Query: 220 KLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               L  PLL    G  KM K+ +  I +++   +P   +    +I D  + S+ + L+ 
Sbjct: 209 PQVVLMMPLLVGLDGEKKMSKSANNYIGISE---APSEMFGKIMSISDDLMWSYYELLSF 265

Query: 279 LPMSEIDRM-AKLQ-GKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM 336
            P+ EI +  A ++ GK   + K ++A EI    H   +A+ A    +  F  +     M
Sbjct: 266 RPLEEIAQFKADVEAGKNPRDIKVLLAKEIIARFHSESDADAAEQEFVNRFAKNQIPDEM 325

Query: 337 PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKL 389
           P       +   G  +  L+ +AG   S+++A R +K  A+KI+   I++ K 
Sbjct: 326 PEF-----DFDAGRPVSNLLKEAGLCPSSSDAMRMVKQGAVKIDGEKIADSKF 373


>gi|254374400|ref|ZP_04989882.1| tyrosyl-tRNA synthetase [Francisella novicida GA99-3548]
 gi|151572120|gb|EDN37774.1| tyrosyl-tRNA synthetase [Francisella novicida GA99-3548]
          Length = 396

 Score =  105 bits (263), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 98/360 (27%), Positives = 171/360 (47%), Gaps = 36/360 (10%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G D TA  +H GH   +  L  LQ  GH+   L+G  T+ IGDP+ ++ +R  + ++E+ 
Sbjct: 39  GCDPTAPDIHLGHTVVINKLKQLQDLGHEIHFLIGDFTAQIGDPTGKNATRPPLTAEEVA 98

Query: 101 ENIEK-IKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
            N E   K +F    K  T     ++  N  W   +   ++++ + S  +V RML  +  
Sbjct: 99  ANAETYTKQVFKILDKDKT-----VIRRNGDWFNKMSASEMIK-LASKSTVARMLERDDF 152

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R K  QS+S  EF Y ++Q YD V  A N D  +++GG+DQ  N++ G +L ++    
Sbjct: 153 SKRYKGGQSISIHEFLYPLVQGYDSV--AMNAD--IELGGTDQKFNLLMGRELQKQQGQE 208

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYN---------FWQYWRNIDDADV 269
               +T PLL    G  KM K+    I + +     +           W+Y+      ++
Sbjct: 209 PQVIITMPLLEGLDGVKKMSKSSQNYIGIEEPANEIFGKIMSISDELMWRYY------EL 262

Query: 270 VSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDM 329
           +SF K L  +   + D  A    ++I   K  +A E+    H + +AE    +A + F  
Sbjct: 263 LSF-KSLENIAKLKQDVAAGANPRDI---KIELAKELIERFHSKGDAE----SAHQDFIQ 314

Query: 330 SIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKL 389
                 +P   I+  E+++ + +  L+ +AG   ST+EA R ++  A+KI+   +S+ K+
Sbjct: 315 RFQKNQIPD-DINVVELNQELPIANLLKEAGLVASTSEANRMIQQGAVKIDGEKLSDGKI 373


>gi|299529505|ref|ZP_07042942.1| tyrosyl-tRNA synthetase [Comamonas testosteroni S44]
 gi|298722368|gb|EFI63288.1| tyrosyl-tRNA synthetase [Comamonas testosteroni S44]
          Length = 410

 Score =  105 bits (263), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 103/381 (27%), Positives = 172/381 (45%), Gaps = 42/381 (11%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  +  LQ  GH+ I L+G  T++IGDPS R+ +R  + +++I
Sbjct: 53  LGLDPTAPDIHLGHTVVLNKMRQLQDLGHQVIFLIGDFTTLIGDPSGRNSTRPPLTAEQI 112

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           + N E     ++   K        +  N+E W   +    ++ ++ + ++V RM+     
Sbjct: 113 KVNAET---YYTQAAKVLDPARTEVRYNSE-WCDQLGARGMI-QLSAKYTVARMMERNDF 167

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
            +R     S+S  EF Y +LQ YD V L  +    L++GG+DQ  N++ G  L       
Sbjct: 168 HTRFTDGSSISLHEFLYPLLQGYDSVALKSD----LELGGTDQKFNLMMGRHLQAEYGQE 223

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRL-- 276
           +   LT PLL    G  KM K+ +  I + ++  + +           A V+S +  L  
Sbjct: 224 QQCVLTMPLLVGLDGVHKMSKSKNNYIGITEDANTMF-----------AKVLSISDELMW 272

Query: 277 ---TTLPMSEIDRMAKLQ-----GKEINEAKKIIATEITTMVHGREEAEKAATAAMECFD 328
              T L    +  +A L+     G     AK  +A EIT   H  E A+ A    +    
Sbjct: 273 DWYTLLSFKSLAEIAALKAEIEAGGNPKHAKVALAKEITARFHSAEAADAAEQDFINRSK 332

Query: 329 MSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEK 388
             I    +P IS+S       +G+  L+ +A  A ST EA R +    ++++ ++IS+  
Sbjct: 333 GGI-PDDIPEISLS----GAPLGIGALVKQANLAASTGEANRLIDGGGVRVDGNVISDRA 387

Query: 389 LQIKLQDFDSTGNIKLSFGKK 409
           L++        G   L  GK+
Sbjct: 388 LKL------DAGTFVLQVGKR 402


>gi|254372949|ref|ZP_04988438.1| tyrosyl-tRNA synthetase [Francisella tularensis subsp. novicida
           GA99-3549]
 gi|151570676|gb|EDN36330.1| tyrosyl-tRNA synthetase [Francisella novicida GA99-3549]
          Length = 396

 Score =  105 bits (263), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 98/360 (27%), Positives = 171/360 (47%), Gaps = 36/360 (10%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G D TA  +H GH   +  L  LQ  GH+   L+G  T+ IGDP+ ++ +R  + ++E+ 
Sbjct: 39  GCDPTAPDIHLGHTVVINKLKQLQDLGHEIHFLIGDFTAQIGDPTGKNATRPPLTAEEVA 98

Query: 101 ENIEK-IKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
            N E   K +F    K  T     ++  N  W   +   ++++ + S  +V RML  +  
Sbjct: 99  ANAETYTKQVFKILDKDKT-----VIRRNGDWFNKMSASEMIK-LASKSTVARMLERDDF 152

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R K  QS+S  EF Y ++Q YD V  A N D  +++GG+DQ  N++ G +L ++    
Sbjct: 153 SKRYKGGQSISIHEFLYPLVQGYDSV--AMNAD--IELGGTDQKFNLLMGRELQKQQGQE 208

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYN---------FWQYWRNIDDADV 269
               +T PLL    G  KM K+    I + +     +           W+Y+      ++
Sbjct: 209 PQVIITMPLLEGLDGVKKMSKSSQNYIGIEEPANEIFGKIMSISDELMWRYY------EL 262

Query: 270 VSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDM 329
           +SF K L  +   + D  A    ++I   K  +A E+    H + +AE    +A + F  
Sbjct: 263 LSF-KSLENIAKLKQDVAAGANPRDI---KIELAKELIERFHSKGDAE----SAHQDFIQ 314

Query: 330 SIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKL 389
                 +P   I+  E+++ + +  L+ +AG   ST+EA R ++  A+KI+   +S+ K+
Sbjct: 315 RFQKNQIPD-DINVVELNQELPIANLLKEAGLVASTSEANRMIQQGAVKIDGEKLSDGKI 373


>gi|326318746|ref|YP_004236418.1| tyrosyl-tRNA synthetase [Acidovorax avenae subsp. avenae ATCC
           19860]
 gi|323375582|gb|ADX47851.1| tyrosyl-tRNA synthetase [Acidovorax avenae subsp. avenae ATCC
           19860]
          Length = 411

 Score =  105 bits (263), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 99/381 (25%), Positives = 173/381 (45%), Gaps = 42/381 (11%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  +  LQ  GH+ I L+G  T++IGDPS R+ +R  +  ++I
Sbjct: 53  LGLDPTAPDIHIGHTVVLNKMRQLQDLGHQVIFLIGDFTTLIGDPSGRNTTRPPLTPEQI 112

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           + N E     ++   K        +  N+E W   +    ++ ++ + ++V RM+     
Sbjct: 113 KINAET---YYTQAAKVLDPARTEIRYNSE-WSEPLGAAGMI-QLAAKYTVARMMERNDF 167

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R     S+S  EF Y +LQ YD V L  +    L++GG+DQ  N++ G  L +     
Sbjct: 168 HQRFTDGSSISLHEFLYPLLQGYDSVALKSD----LELGGTDQKFNLLMGRHLQQEYGQE 223

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRL-- 276
               LT PLL    G  KM K+ +  I + ++  + +           A V+S +  L  
Sbjct: 224 PQCILTMPLLVGLDGVDKMSKSKNNYIGITEDANTMF-----------AKVLSISDDLMW 272

Query: 277 ---TTLPMSEIDRMAKLQ-----GKEINEAKKIIATEITTMVHGREEAEKAATAAMECFD 328
              T L    +  +A L+     G+   +AK ++A EITT  H    A+ A         
Sbjct: 273 DWYTLLSFKSLAEIAALRQEVEGGRNPKDAKVMLAREITTRFHSAAAADAAEADFANRSK 332

Query: 329 MSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEK 388
             +  + +P +S+        +G+  L+ +A  A ST+EA R +    ++++ +++S+  
Sbjct: 333 GGVPDE-IPEVSLG----GAPLGIGALLKQANLAPSTSEANRLIDGGGVRVDGAVVSDRG 387

Query: 389 LQIKLQDFDSTGNIKLSFGKK 409
           L++        G   L  GK+
Sbjct: 388 LKL------DAGTYVLQVGKR 402


>gi|146328884|ref|YP_001210187.1| tyrosyl-tRNA synthetase [Dichelobacter nodosus VCS1703A]
 gi|146232354|gb|ABQ13332.1| tyrosyl-tRNA synthetase [Dichelobacter nodosus VCS1703A]
          Length = 400

 Score =  105 bits (263), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 91/354 (25%), Positives = 164/354 (46%), Gaps = 18/354 (5%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  LH GH   L  L  +Q  GH+ + L+G  T+ IGDPS ++ +R  +  +++
Sbjct: 40  LGMDPTAPDLHFGHTVVLNKLRQIQDLGHQVVFLVGDFTAQIGDPSGKNSTRPPLSKEQV 99

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
            EN +  +       K    +   +  N+E W+  +   D++  + + ++V R+L  +  
Sbjct: 100 LENAKTYQ---EQVFKILDREKTEIRFNSE-WMDKMTASDMVH-LTAKYTVARILERDDF 154

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
           + R    Q ++  EF Y + QAYD V L    +  +++GG+DQ  N++ G D+       
Sbjct: 155 QKRYHNHQPIAVHEFLYSLTQAYDSVAL----EADIELGGTDQKFNLLVGRDIQREYGLS 210

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               LT P+L    G  KM K+L   I +          +    +I D  +  + + L+ 
Sbjct: 211 PQAILTMPILEGLDGVQKMSKSLGNYIGI---FEPAAEMFGKIMSISDELMWRYFELLSM 267

Query: 279 LPMSEID--RMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM 336
             ++EID  + +   G    + K  +A E+    H    A  A  A ++ F  +     +
Sbjct: 268 RSLAEIDALKASVASGANPRDIKFELALELVARFHDDASARAAQEAFVQRFAKNEIPDDL 327

Query: 337 PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQ 390
             ++I+    S  + +  L+  AG  +ST+E  R +K  A+KI+   I ++ LQ
Sbjct: 328 EELTIT---ASEPLPIANLLKDAGLVSSTSEGLRMIKQGAVKIDGQRIDDKNLQ 378


>gi|118497584|ref|YP_898634.1| tyrosyl-tRNA synthetase [Francisella tularensis subsp. novicida
           U112]
 gi|195536282|ref|ZP_03079289.1| tyrosyl-tRNA synthetase [Francisella tularensis subsp. novicida
           FTE]
 gi|118423490|gb|ABK89880.1| tyrosyl-tRNA synthetase [Francisella novicida U112]
 gi|194372759|gb|EDX27470.1| tyrosyl-tRNA synthetase [Francisella tularensis subsp. novicida
           FTE]
          Length = 396

 Score =  105 bits (263), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 98/360 (27%), Positives = 171/360 (47%), Gaps = 36/360 (10%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G D TA  +H GH   +  L  LQ  GH+   L+G  T+ IGDP+ ++ +R  + ++E+ 
Sbjct: 39  GCDPTAPDIHLGHTVVINKLKQLQDLGHEIHFLIGDFTAQIGDPTGKNATRPPLTAEEVA 98

Query: 101 ENIEK-IKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
            N E   K +F    K  T     ++  N  W   +   ++++ + S  +V RML  +  
Sbjct: 99  ANAETYTKQVFKILDKDKT-----VIRRNGDWFNKMSASEMIK-LASKSTVARMLERDDF 152

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R K  QS+S  EF Y ++Q YD V  A N D  +++GG+DQ  N++ G +L ++    
Sbjct: 153 SKRYKGGQSISIHEFLYPLVQGYDSV--AMNAD--IELGGTDQKFNLLMGRELQKQQGQE 208

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYN---------FWQYWRNIDDADV 269
               +T PLL    G  KM K+    I + +     +           W+Y+      ++
Sbjct: 209 PQVIITMPLLEGLDGVKKMSKSSQNYIGIEEPANEIFGKIMSISDELMWRYY------EL 262

Query: 270 VSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDM 329
           +SF K L  +   + D  A    ++I   K  +A E+    H + +AE    +A + F  
Sbjct: 263 LSF-KSLENIAKLKQDVAAGANPRDI---KIELAKELIERFHSKGDAE----SAHQDFIQ 314

Query: 330 SIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKL 389
                 +P   I+  E+++ + +  L+ +AG   ST+EA R ++  A+KI+   +S+ K+
Sbjct: 315 RFQKNQIPD-DINVVELNQELPIANLLKEAGLVASTSEANRMIQQGAVKIDGEKLSDGKI 373


>gi|328949986|ref|YP_004367321.1| Tyrosyl-tRNA synthetase [Marinithermus hydrothermalis DSM 14884]
 gi|328450310|gb|AEB11211.1| Tyrosyl-tRNA synthetase [Marinithermus hydrothermalis DSM 14884]
          Length = 435

 Score =  105 bits (263), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 91/393 (23%), Positives = 177/393 (45%), Gaps = 51/393 (12%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D T   LH GH   L  +   Q+ GHK + ++G  T +IGDPS R+++R  +  +E 
Sbjct: 37  LGADPTRPDLHLGHAVVLRKMRQFQELGHKIVLIIGDFTGMIGDPSGRNKTRPPLTLEET 96

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLN-NETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
           + N +         ++    + D   L  N  WL  +++ ++++ + S  +V +ML  E 
Sbjct: 97  RTNAQTYVAQVGKILRQ---EPDVFELRYNSEWLGQLRFQEVIK-LASQITVAQMLERED 152

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
            ++R      +S  EF Y + QAYD V +  +    ++MGG+DQ  N++ G ++      
Sbjct: 153 FKARYTAGTPISLHEFLYPLAQAYDSVAIQAD----VEMGGTDQKFNLLVGREIQRAYGQ 208

Query: 219 PKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT 277
            +  A   P+L    G  KM K+L   I +N++ TS    ++    + D  +  +   LT
Sbjct: 209 EEQVAFLMPILPGLDGKEKMSKSLDNYIGVNEDPTS---MFKKLMRVPDHVLHEYFTLLT 265

Query: 278 TLPMSEIDRMAKLQGKEINEAKKIIATEITTM-----------------------VHGRE 314
            L  +E+ ++ +  G  +  A +++A  +T                           GR+
Sbjct: 266 DLEAAEVQQLLETGG--MVGAHRVLARLVTGAYVLERIPARMDRAFYEALGYDLEAAGRD 323

Query: 315 EAEKA------------ATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGF 361
            A KA            A A  +        + +P + ++ +E+  G + +  L   AG 
Sbjct: 324 PAPKASQYPEVSERLAHAEARYDAVAKGGIPEDIPLVEVAPEELKDGAIWVCRLFTLAGL 383

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
             S  EARR +++  ++++ +++++   Q+ L+
Sbjct: 384 TRSNGEARRLIQNRGLRVDGAVVTDPNQQLTLE 416


>gi|158316978|ref|YP_001509486.1| tyrosyl-tRNA synthetase [Frankia sp. EAN1pec]
 gi|158112383|gb|ABW14580.1| tyrosyl-tRNA synthetase [Frankia sp. EAN1pec]
          Length = 465

 Score =  105 bits (263), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 98/373 (26%), Positives = 165/373 (44%), Gaps = 46/373 (12%)

Query: 37  TAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRS 96
            A  G D T + +H GH   ++LL    + GH+ + ++G  T+ IGDPS R + R  +  
Sbjct: 82  VAKFGIDPTGAEVHLGHAVPMLLLSRFARMGHRVVFIVGDITAKIGDPSGRSDERPALTD 141

Query: 97  QEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSF 156
           ++I  N+   +   + F  +      A    N  WL  ++   LL EI S   V+  L  
Sbjct: 142 EDIARNLTTYRAQVTPFFDF----ERAEFRRNGDWLREVRLPRLL-EIVSRIPVSMSLQR 196

Query: 157 ESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNI--------IC 208
           E  R RL     LS  E  Y ++ A D VE+    D  L++GG DQ+ N+        IC
Sbjct: 197 EDFRRRLDAGHGLSLAELLYSVVMALDSVEV----DSDLEIGGIDQFLNMQMCRKVMEIC 252

Query: 209 GIDLGERLKTPKLFALTSPLL-TTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDA 267
           G       +TP++   TS +  T  +G KM K+    + L     +P   +    ++ D 
Sbjct: 253 G-------QTPEIVVATSLIEGTDGTGAKMSKSRGNYVPLT---AAPGEIFGKIMSVPDR 302

Query: 268 DVVSFAKRLTTLPMSEIDRMAKLQGKEINEA-----KKIIATEITTMVHGREEAEKAATA 322
            V  + + L+    SE+  +A    +E   A     KKI+A E+T  +HG + A  A   
Sbjct: 303 LVEPYFRALSEWRDSELAVLAAR--REAGTAHPMDLKKILAGEVTAAIHGVDAAMTARAE 360

Query: 323 AMECFDMSIHSQ--HMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKIN 380
            +  F     ++   +P +S        G  +   +   GFA S  + RR  + N +++ 
Sbjct: 361 FVARFSRRTFAEVDDLPVLS------DLGATVADAVRGLGFAKSNGDVRRVAEQNGLRL- 413

Query: 381 NSIISNEKLQIKL 393
             ++ +E+ Q ++
Sbjct: 414 --VVESEEGQTQV 424


>gi|120599833|ref|YP_964407.1| tyrosyl-tRNA synthetase [Shewanella sp. W3-18-1]
 gi|146292231|ref|YP_001182655.1| tyrosyl-tRNA synthetase [Shewanella putrefaciens CN-32]
 gi|120559926|gb|ABM25853.1| tyrosyl-tRNA synthetase [Shewanella sp. W3-18-1]
 gi|145563921|gb|ABP74856.1| tyrosyl-tRNA synthetase [Shewanella putrefaciens CN-32]
 gi|319425531|gb|ADV53605.1| tyrosyl-tRNA synthetase [Shewanella putrefaciens 200]
          Length = 397

 Score =  105 bits (263), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 99/387 (25%), Positives = 176/387 (45%), Gaps = 34/387 (8%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           IL E   + ++   R L I          +G D TA  +H GH   L  L   Q+ GH+ 
Sbjct: 18  ILLESDLLEKLKEGRPLRI---------KLGADPTAPDIHLGHTVILNKLRLFQELGHEV 68

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           I L+G  T ++GDPS ++ +R  +  +++  N E  K      +     + +     N +
Sbjct: 69  IFLIGDFTGMVGDPSGKNSTRPPLTREQVLANAETYKEQVYKILDPAKTRIEF----NSS 124

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           WL  +    ++R + S  +V RM+  +  + R    QS++  EF Y +LQ YD V L  +
Sbjct: 125 WLEPLGAAGMIR-LASQQTVARMMERDDFKKRYASGQSIAIHEFMYPLLQGYDSVALKAD 183

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNK 249
               +++GG+DQ  N++ G +L +         +  PLL    G  KM K+    I +  
Sbjct: 184 ----VELGGTDQKFNLLMGRELQKAEGQKPQAVIMMPLLEGLDGVKKMSKSAHNYIGV-- 237

Query: 250 EMTSPYN-FWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATEI 306
             + P N  +    +I D  +  + + L+  P++EI++  +  + G    + K  +A EI
Sbjct: 238 --SEPANEMFGKLMSISDDLMWRYFELLSFRPLAEIEQFKQDVVNGANPRDIKIALAKEI 295

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMG--LLTLIVKAGFATS 364
            T  H    AE A  A ++       ++ M    I   E++ G G  +  L+  A    S
Sbjct: 296 ITRFHDAASAESAHQAFVD------RAKGMIPDDIEAIELAAGEGIAIANLLKDADLVAS 349

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQI 391
           T+EA R +K  A+K++   + + ++ +
Sbjct: 350 TSEAMRMIKQGAVKMDGEKLEDSRMTL 376


>gi|114564135|ref|YP_751649.1| tyrosyl-tRNA synthetase [Shewanella frigidimarina NCIMB 400]
 gi|114335428|gb|ABI72810.1| tyrosyl-tRNA synthetase [Shewanella frigidimarina NCIMB 400]
          Length = 398

 Score =  105 bits (262), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 88/353 (24%), Positives = 163/353 (46%), Gaps = 20/353 (5%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  +   Q+ GH+ I L+G  T ++GDPS ++ +R  +  +++
Sbjct: 38  LGADPTAPDIHLGHTVILNKMRTFQELGHEVIFLIGDFTGMVGDPSGKNSTRPPLTREQV 97

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
             N E  K      +     + +     N +WL  +    ++R + S  +V RM+  +  
Sbjct: 98  LANAETYKEQVYKILDPAKTRIEF----NSSWLEPLGAAGMIR-LASQQTVARMMERDDF 152

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
           + R    QS++  EF Y +LQ YD V L  +    +++GG+DQ  N++ G +L +     
Sbjct: 153 KKRYASGQSIAIHEFMYPLLQGYDSVALKAD----VELGGTDQKFNLLMGRELQKSEGQK 208

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYN-FWQYWRNIDDADVVSFAKRLT 277
               +  PLL    G  KM K+    I +    + P N  +    +I D  +  + + L+
Sbjct: 209 PQTVIMMPLLEGLDGVKKMSKSAHNYIGV----SEPANEMFGKLMSISDDLMWRYLELLS 264

Query: 278 TLPMSEID--RMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQH 335
             P++E+   ++    G    + K ++A EI    H  E+A+ A  A ++ F        
Sbjct: 265 FRPLTELAQFKLDVENGTNPRDIKILLAKEIIARFHDEEQAQAAHQAFIDRFQKGAIPDD 324

Query: 336 MPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEK 388
           +  + +   E   G+ +  L+  AG   ST++  R +K  A+K++   I + +
Sbjct: 325 IEEVVL---EAGEGIAIANLLKDAGLVGSTSDGIRMIKQGAVKMDGEKIEDSR 374


>gi|255022264|ref|ZP_05294257.1| Tyrosyl-tRNA synthetase [Acidithiobacillus caldus ATCC 51756]
 gi|254968296|gb|EET25865.1| Tyrosyl-tRNA synthetase [Acidithiobacillus caldus ATCC 51756]
          Length = 411

 Score =  105 bits (262), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 95/383 (24%), Positives = 169/383 (44%), Gaps = 28/383 (7%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  LH GH   L      Q  GH+ + L+G  T+ IGDP+ +  +R  + ++ +
Sbjct: 43  LGMDPTAPDLHLGHTVLLHKARQFQDLGHQVLFLIGDFTARIGDPTGKSSTRPPLSAEAV 102

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           Q N E  +     F      +T+ +   N  WL  ++  +L+ ++ + ++V RML  +  
Sbjct: 103 QANAETYRQQI--FRILDPARTEVVF--NSHWLDRLRPQELI-QLAARYTVARMLERDDF 157

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R   +Q ++  EF Y +LQ YD V L  +    +++GG+DQ  N++ G +L +     
Sbjct: 158 SKRYHAQQPIAVHEFLYPLLQGYDSVALRAD----VELGGTDQRFNLLVGRELQKEYGQR 213

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               LT P+L    G  KM K+L   I L     +P   +    +I D  +  +   L+ 
Sbjct: 214 PQVVLTMPILEGLDGVQKMSKSLGNTIALED---TPEEMFGKLMSISDTLMWRYYALLSA 270

Query: 279 LPMSE-IDRMAKLQGKEIN--EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQH 335
               E +    K +  EIN  + K  +A E+ T  HG      A   A E F      + 
Sbjct: 271 KSQPEQVALRQKAEAGEINPRDCKLDLAQELVTRFHG----SSAGVRARETFLAQFQRRE 326

Query: 336 MP-TISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
            P  +++    +   + L   +   G+  S++E  R ++  A+ +  + I +  L +   
Sbjct: 327 RPDDLALQTLRLPPPLTLAKTLQALGWVRSSSEGMRKIREGAVHLGETRIEDPSLAL--- 383

Query: 395 DFDSTGNIKLSFGKKNHIICHLC 417
             +      L FGK++  +  +C
Sbjct: 384 --EPGPEYFLQFGKRH--VARVC 402


>gi|237746826|ref|ZP_04577306.1| tyrosyl-tRNA synthetase [Oxalobacter formigenes HOxBLS]
 gi|229378177|gb|EEO28268.1| tyrosyl-tRNA synthetase [Oxalobacter formigenes HOxBLS]
          Length = 415

 Score =  105 bits (262), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 94/369 (25%), Positives = 171/369 (46%), Gaps = 38/369 (10%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  LH GH   L  +  LQ  GH  I L+G  TS+IGDPS R+ +R  +  +++
Sbjct: 58  LGLDPTAPDLHLGHTVVLNKMRQLQDLGHVVIFLIGDFTSMIGDPSGRNVTRPPLTREQV 117

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           +EN       FS        +   +  N+E W   +    ++ ++ S +++ R++  +  
Sbjct: 118 KENAMT---YFSQASLVLDPERTEIRYNSE-WSDELGARGMI-QLASQYTLARIMERDDF 172

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R +    +S  E  Y ++Q YD V L  +    +++GG+DQ  N++ G +L  +    
Sbjct: 173 AKRFRNGNPISVHELLYPLMQGYDSVALKSD----MELGGTDQKFNLLVGRELQRQYGQE 228

Query: 220 KLFALTSPLL---------TTASGTKMGKTLSGAIWLNKEMT-SPYNFWQYWRNIDDADV 269
               LT PLL         + + G  +G T  G +   K M+ S    W+Y+      D+
Sbjct: 229 PQCILTMPLLEGLDGVEKMSKSKGNYVGITEPGNVMFGKLMSISDEMMWRYY------DL 282

Query: 270 VSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECF 327
           +SF        + EI+R+ +    G+   + K     EI T  H + +A+ A    M   
Sbjct: 283 LSFRS------IDEIERLKEEVRNGRNPRDVKVAFCQEIVTRFHSKADADAALEDFMARS 336

Query: 328 DMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNE 387
              I    +P++S++       +G+  ++ +AG   ST+EA R +    +++++S +S+ 
Sbjct: 337 RGGI-PDDIPSVSLN----GAPLGIGQVLKQAGLCASTSEALRLVDQGGVRVDSSTVSDR 391

Query: 388 KLQIKLQDF 396
            L++    F
Sbjct: 392 GLKLGAGTF 400


>gi|317969063|ref|ZP_07970453.1| tyrosyl-tRNA synthetase [Synechococcus sp. CB0205]
          Length = 420

 Score =  105 bits (262), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 101/391 (25%), Positives = 169/391 (43%), Gaps = 48/391 (12%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D T S +H GH      L   Q  GH  + ++G  T+ IGDP+ +  +R  + ++E+
Sbjct: 51  LGIDPTGSDIHLGHSILFRKLRAFQDAGHTAVLIIGDFTARIGDPTGKSATRVQLTAEEV 110

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALML------------NNETWLCSIKYIDLLREIGSF 147
           + N        +   + G G+  A  L             N  WL S+    ++  +G  
Sbjct: 111 ESNAR------TYLQQLGQGQDPARALLDFETPGRLEVRRNSEWLASLDLPKVIELLG-I 163

Query: 148 FSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNII 207
            +V +ML+ E   +R      +S  EF Y +LQ YD V +  +    L++GG+DQ  N+ 
Sbjct: 164 STVGQMLAKEDFANRYGSGTPISLHEFLYPLLQGYDSVAVQAD----LELGGTDQKFNVA 219

Query: 208 CGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDD 266
            G DL         F +  P+L    G  KM K+L   + L ++   P + +     + D
Sbjct: 220 MGRDLQRHFGQRTQFGMLLPILAGLDGVQKMSKSLGNTVGLAED---PLSMYSKLEKVPD 276

Query: 267 ADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMEC 326
           A V  +   LT L ++ +    +       E +K +A E+T   HG+  A++A   A + 
Sbjct: 277 AAVEEYLTLLTNLDLAALPDNPR-------ERQKAMALEVTRQRHGQAAADQAQADAGKL 329

Query: 327 FDMSIHS----QHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNS 382
              +  S      +P  S++  EV+       L+   G   S++EARR ++   +K++  
Sbjct: 330 VGGAKGSGAADAEVPEASLA--EVNFPAKAFYLLSAVGICASSSEARRQIQGGGVKLD-- 385

Query: 383 IISNEKLQIKLQDF---DSTGNIKLSFGKKN 410
               EKL    Q+F   D      L  GKK 
Sbjct: 386 ---GEKLADPNQEFAGPDQLAGKVLQLGKKT 413


>gi|299768264|ref|YP_003730290.1| tyrosyl-tRNA synthetase [Acinetobacter sp. DR1]
 gi|298698352|gb|ADI88917.1| tyrosyl-tRNA synthetase [Acinetobacter sp. DR1]
          Length = 410

 Score =  105 bits (262), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 92/373 (24%), Positives = 164/373 (43%), Gaps = 24/373 (6%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           I+SE   + ++   R L I           G+D TA  LH GH   +  L   Q  GH+ 
Sbjct: 27  IISEEDLLKKLKENRPLKIKA---------GFDPTAPDLHLGHTVLINKLKTFQDLGHEV 77

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
             L+G  T++IGDP+ +  +R  +  ++++ N +  +     F      KT      N  
Sbjct: 78  TFLIGDYTAMIGDPTGKSATRPPLSREQVEANAKTYQE--QVFKILDPNKTKVRF--NSE 133

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           W       DL+ ++ S  +V+RML  +    R    Q ++  EF Y ++Q YD + L   
Sbjct: 134 WFNQKSAADLI-QLASQQTVSRMLERDDFTKRYSNHQPIAIHEFLYPLVQGYDSIAL--- 189

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNK 249
            +  +++GG+DQ  N++ G  L  R        +T P+L    G  KM K+L   I +  
Sbjct: 190 -EADVELGGTDQTFNLLMGRTLQSRYGQESQVCITVPILEGLDGVNKMSKSLGNYIGV-- 246

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATEIT 307
              +P   +Q   ++ D+ +  +   L+   + EI  + +    G+   E K+I+A E+ 
Sbjct: 247 -FDTPGAMYQKVLSMPDSLIERYFDLLSFKSLDEIKALLEEIAAGRNPQEVKRILALELV 305

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
              H  E A  A  +A          +  P ++IS+ E    + + T++  AG   +   
Sbjct: 306 ERFHDAEAAANAHKSAGNLITEGEVPEDTPEVTISRGEFGGEIFIATILRVAGLNPNAAA 365

Query: 368 ARRHLKSNAIKIN 380
           A+  +   A+K++
Sbjct: 366 AKDAVARGAVKVD 378


>gi|323492029|ref|ZP_08097194.1| tyrosyl-tRNA synthetase [Vibrio brasiliensis LMG 20546]
 gi|323313758|gb|EGA66857.1| tyrosyl-tRNA synthetase [Vibrio brasiliensis LMG 20546]
          Length = 395

 Score =  105 bits (262), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 88/353 (24%), Positives = 161/353 (45%), Gaps = 20/353 (5%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH      L   Q+ GH    L+G  T+++GDP+ ++ +R  +  +++
Sbjct: 38  LGADPTAPDIHLGHTVIFNKLRAFQELGHDVTFLIGDFTAMVGDPTGKNSTRPPLSREDV 97

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
             N E  K      +     K   +  N+E WL  +    ++R + +  +V RML  +  
Sbjct: 98  LRNAETYKEQVFKILDPAKTK---IQFNSE-WLSELGAEGMIR-LAANQTVARMLERDDF 152

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
           + R    Q ++  EF Y +LQ YD V +    +  +++GG+DQ  N++ G +L +     
Sbjct: 153 KKRYAGGQPIAIHEFMYPLLQGYDSVAM----ETDVELGGTDQKFNLLMGRELQKANGQK 208

Query: 220 KLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               L  PLL    G  KM K+ +  I +++   +P   +    +I D  + ++   L+ 
Sbjct: 209 PQVVLMMPLLVGLDGEKKMSKSANNYIGISE---APSEMFGKIMSISDDLMWNYYDLLSF 265

Query: 279 LPMSEIDRMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM 336
            P+ E+ ++      G+   + K  +A EI    H + +A+ A    +  F  +     M
Sbjct: 266 RPLDEVAQLKADVAAGQNPRDVKVALAKEIIARFHSQADADAAEQEFVNRFAKNQIPDEM 325

Query: 337 PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKL 389
           P       E   G+ +  L+ +A    ST+EA R +K  A KI+   +++ K 
Sbjct: 326 PEF-----EFEAGLPVSNLLKEAALCASTSEAMRMVKQGAAKIDGEKVADSKF 373


>gi|269966929|ref|ZP_06181001.1| tyrosyl-tRNA synthetase [Vibrio alginolyticus 40B]
 gi|269828412|gb|EEZ82674.1| tyrosyl-tRNA synthetase [Vibrio alginolyticus 40B]
          Length = 395

 Score =  105 bits (262), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 90/353 (25%), Positives = 166/353 (47%), Gaps = 20/353 (5%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH      L   Q+ GH+   L+G  T+++GDP+ ++ +R  +  +++
Sbjct: 38  LGADPTAPDIHLGHTVIFNKLRLFQELGHEVTFLIGDFTAMVGDPTGKNTTRPPLSREDV 97

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
             N E  K      +     K   +  N+E WL  +    ++R + +  +V RML  +  
Sbjct: 98  LRNAETYKEQVFKILDPAKTK---IQFNSE-WLSELGAEGMIR-LAANQTVARMLERDDF 152

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
           + R    Q ++  EF Y +LQ +D V +    +  +++GG+DQ  N++ G +L +     
Sbjct: 153 KKRYAGGQPIAIHEFMYPLLQGWDSVAM----ETDVELGGTDQKFNLLMGRELQKSHGQK 208

Query: 220 KLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               L  PLL    G  KM K+ +  I +++   +P   +    +I D  + S+ + L+ 
Sbjct: 209 PQVVLMMPLLVGLDGEKKMSKSANNYIGISE---APSEMFGKIMSISDDLMWSYYELLSF 265

Query: 279 LPMSEIDRM-AKLQ-GKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM 336
            P+ EI +  A ++ GK   + K ++A EI    H   +A+ A    +  F  +     M
Sbjct: 266 RPLEEIAQFKADVEAGKNPRDIKVLLAKEIIARFHSEYDADAAEQEFVNRFAKNQIPDEM 325

Query: 337 PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKL 389
           P       +   G  +  L+ +AG   S+++A R +K  A+KI+   I++ K 
Sbjct: 326 PEF-----DFDAGRPVSNLLKEAGLCPSSSDAMRMVKQGAVKIDGEKIADSKF 373


>gi|332535490|ref|ZP_08411271.1| tyrosyl-tRNA synthetase [Pseudoalteromonas haloplanktis ANT/505]
 gi|332035100|gb|EGI71615.1| tyrosyl-tRNA synthetase [Pseudoalteromonas haloplanktis ANT/505]
          Length = 399

 Score =  105 bits (262), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 101/392 (25%), Positives = 182/392 (46%), Gaps = 39/392 (9%)

Query: 10  SILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
            IL E   + ++ + ++L I           G+D TA  LH GH   +  +   Q  GH+
Sbjct: 16  EILIEDELVEKLKSGKKLKIKA---------GFDPTAPDLHLGHTVLINKMKTFQDLGHE 66

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
            I L+G  T +IGDP+ ++ +R+ +  +++  N E  K     F      KT      N 
Sbjct: 67  VIFLIGDFTGMIGDPTGKNVTRKPLTREDVLANAETYKE--QVFKILDPAKTTVAF--NS 122

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
           TW+  +    +++ + +  +V RML  +  + R    Q ++  EF Y ++Q +D V L  
Sbjct: 123 TWMEKLGAAGMIK-LAANQTVARMLERDDFKKRYGSGQPIAIHEFLYPLVQGWDSVAL-- 179

Query: 190 NYDCRLQMGGSDQWGNIICGIDL----GERLKTPKLFALTSPLLTTASGT-KMGKTLSGA 244
             +  +++GG+DQ  N++ G +L    G++ +T     L  PLL    G  KM K+L   
Sbjct: 180 --ESDVELGGTDQRFNLLMGRELQKVEGQKPQT----VLMMPLLEGTDGVQKMSKSLGNY 233

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKII 302
           I +     +P + +    +I D  +  +   L+ L + EI    +   QG    + K  +
Sbjct: 234 IGITD---APNDMFGKIMSISDVLMWRYYDLLSALSIEEIAAQKERVEQGTNPRDIKIEL 290

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMP--TISISKDEVSRGMGLLTLIVKAG 360
           A E+    H   +A+ A    ++ F        +P  TI+I++D +     +  L+ +A 
Sbjct: 291 AKELIARFHSEADAQGAHDDFIQRFQKKALPDEIPELTITIAEDTIL----IANLLKEAN 346

Query: 361 FATSTNEARRHLKSNAIKIN-NSIISNEKLQI 391
              ST+EA R +K  A+K+N    I++ KL++
Sbjct: 347 LVVSTSEAMRMIKQGAVKLNGEDKITDTKLEV 378


>gi|320332623|ref|YP_004169334.1| Tyrosyl-tRNA synthetase [Deinococcus maricopensis DSM 21211]
 gi|319753912|gb|ADV65669.1| Tyrosyl-tRNA synthetase [Deinococcus maricopensis DSM 21211]
          Length = 407

 Score =  105 bits (262), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 92/364 (25%), Positives = 165/364 (45%), Gaps = 31/364 (8%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D T   LH GH   L  +   Q  GHK I L+G  T++IGDPS + ++R  +  +E 
Sbjct: 44  LGADPTRPDLHLGHAVILRKMRQFQDLGHKVIMLIGDFTAMIGDPSGKSKTRPPLTLEET 103

Query: 100 QEN----IEKIKGIFSSFIKYGTGKTDALMLN---NETWLCSIKYIDLLREIGSFFSVNR 152
           + N    +E+ K +  S         D  +L    N  WL  + Y D++R + S ++V R
Sbjct: 104 RANAVSYLEQCKLVLRS---------DPEVLEVRFNGEWLEPMGYADIIR-LASKYTVAR 153

Query: 153 MLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL 212
           +L  +    RL     +   E  Y + Q YD V L    +  +++GG+DQ  N + G  L
Sbjct: 154 ILERDDFTKRLAAGTPVQMHELLYPLTQGYDSVAL----EADVELGGTDQLFNNLVGRAL 209

Query: 213 GERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVS 271
                      +T PLL    G  KM K+L   I L  E    +  +     + D  +++
Sbjct: 210 QRDYGQAAQVVMTLPLLVGLDGVEKMSKSLDNYIGLTDEA---HEMFAKLMKVPDTLLLN 266

Query: 272 FAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSI 331
           +   LT L  + I+ +  L G  +  A + +A  +T  +H   + + A           I
Sbjct: 267 YFTLLTDLSEARIEEL--LAGHPVT-AHRELARAVTAWLHPEADLDAAEERYKAVAKGGI 323

Query: 332 HSQHMPTISISKDEVSRG--MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKL 389
             +++P++++  +E++    +GL  L+  AG   S   AR+ +++  +K+N    ++ + 
Sbjct: 324 -PENIPSVTVPTEELNADGVVGLFRLVALAGLEPSNGAARKLIQNRGLKVNGEAATDPQT 382

Query: 390 QIKL 393
            + +
Sbjct: 383 AVTI 386


>gi|260553758|ref|ZP_05826028.1| tyrosyl-tRNA synthetase [Acinetobacter sp. RUH2624]
 gi|260405062|gb|EEW98562.1| tyrosyl-tRNA synthetase [Acinetobacter sp. RUH2624]
          Length = 410

 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 93/379 (24%), Positives = 169/379 (44%), Gaps = 28/379 (7%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           I+SE   + ++   R L I           G+D TA  LH GH   +  L   Q  GH+ 
Sbjct: 27  IISEEDLLKKLKENRPLKIKA---------GFDPTAPDLHLGHTVLINKLKTFQDLGHEV 77

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
             L+G  T++IGDP+ +  +R  +  ++++ N +  +       K        +  N+E 
Sbjct: 78  TFLIGDYTAMIGDPTGKSATRPPLSREQVEANAKTYQ---EQVFKILDPNKTKVRFNSE- 133

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           W       DL+ ++ S  +V+RML  +    R    Q ++  EF Y ++Q YD + L   
Sbjct: 134 WFNQKSAADLI-QLASQQTVSRMLERDDFTKRYSNHQPIAIHEFLYPLVQGYDSIAL--- 189

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNK 249
            +  +++GG+DQ  N++ G  L  R        +T P+L    G  KM K+L   I +  
Sbjct: 190 -EADVELGGTDQTFNLLMGRTLQSRYGQESQVCITVPILEGLDGVNKMSKSLGNYIGV-- 246

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI----DRMAKLQGKEINEAKKIIATE 305
              +P   +Q   ++ D+ +  +   L+   + EI    D +A   G+   E K+I+A E
Sbjct: 247 -FDAPGAMYQKVLSMPDSLIERYFDLLSFKSLDEIKALLDEIAA--GRNPQEVKRILALE 303

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           +    H  E A  A  +A          +  P ++IS+ E    + + T++  AG   + 
Sbjct: 304 LVERFHDAEAAANAHKSAGNRITEGEVPEDTPEVTISRGEFGGEIFIATILRVAGLNPNA 363

Query: 366 NEARRHLKSNAIKINNSII 384
             A+  +   A+K++ +++
Sbjct: 364 AAAKDAVARGAVKVDWNVV 382


>gi|312963384|ref|ZP_07777866.1| tyrosyl-tRNA synthetase [Pseudomonas fluorescens WH6]
 gi|311282190|gb|EFQ60789.1| tyrosyl-tRNA synthetase [Pseudomonas fluorescens WH6]
          Length = 399

 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 98/348 (28%), Positives = 156/348 (44%), Gaps = 18/348 (5%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   +  L   Q+ GH+ I L+G  T +IGDPS +  +R  +  +++ 
Sbjct: 39  GFDPTAPDLHLGHTVLINKLRQFQELGHQVIFLIGDFTGMIGDPSGKSATRPPLTREQVL 98

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           +N E  K     F      KT+     N TW+  +   D +R + S ++V RML  +   
Sbjct: 99  DNAETYK--TQVFKILDPAKTEVAF--NSTWMDQMGPADFIR-LTSQYTVARMLERDDFD 153

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R    Q ++  EF Y ++Q YD V L  +    +++GG+DQ  N++ G +L        
Sbjct: 154 KRYSTNQPIAIHEFLYPLVQGYDSVALRAD----VELGGTDQKFNLLMGRELQRAYGQEA 209

Query: 221 LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTL 279
              LT PLL    G  KM K+L   + + +   +P   +    +I DA +  + + L+  
Sbjct: 210 QCILTMPLLEGLDGVKKMSKSLGNYVGIQE---APGVMYGKLVSIPDALMWRYFELLSFR 266

Query: 280 PMSEID--RMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMP 337
            M EI+  R     G    + K  +A EI    HG E A  A  AA            +P
Sbjct: 267 SMDEINALRADVEAGANPRDVKIKLAEEIVARFHGEEAAASAHRAAGNRMKDGELPDDLP 326

Query: 338 TISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIIS 385
            I ++  E      +L    KAG   ++  AR  L S  ++I+  ++ 
Sbjct: 327 EIELAAAEAMPIAAVLN---KAGLVKNSAVARDLLGSGGVRIDGEVVD 371


>gi|332304971|ref|YP_004432822.1| tyrosyl-tRNA synthetase [Glaciecola agarilytica 4H-3-7+YE-5]
 gi|332172300|gb|AEE21554.1| tyrosyl-tRNA synthetase [Glaciecola agarilytica 4H-3-7+YE-5]
          Length = 399

 Score =  105 bits (261), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 96/355 (27%), Positives = 167/355 (47%), Gaps = 25/355 (7%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   +  L   QK GH+ I L+G  T +IGDP+ ++ +R+ +  +++ 
Sbjct: 39  GFDPTAPDLHLGHTVLINKLRAFQKLGHEVIFLIGDFTGMIGDPTGKNVTRKPLTREDVL 98

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
            N E  K       K        +  N+E W+  +    +++ + S  +V RML  +  +
Sbjct: 99  ANAETYK---EQVFKILDPSKTTIRFNSE-WMEELGASGMIK-LASSQTVARMLERDDFK 153

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL----GERL 216
            R    Q ++  EF Y ++Q +D V L  +    +++GG+DQ  N++ G +L    G+R 
Sbjct: 154 KRYANGQPIAIHEFLYPLVQGWDSVALKSD----VELGGTDQRFNLLMGRELQKGQGQRP 209

Query: 217 KTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKR 275
           +T     L +PLL    G  KM K+L   I +     SP + +    +I D  +  +   
Sbjct: 210 QT----VLMTPLLEGLDGVQKMSKSLGNYIGIT---DSPSDMFGKIMSISDDLMWRYYDL 262

Query: 276 LTTLPMSEIDRMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS 333
           L+   + EI +  +    G    + K  +A EI    H    A+ A    ++ F  +   
Sbjct: 263 LSFKAIEEIAQYKEQVAAGTNPRDIKIALAKEIIARFHDEAAADAAHHEFVQRFQKNAIP 322

Query: 334 QHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEK 388
             MP  +    E   GM +  L+ +AG   ST+EA R +K  A+K++   ++++K
Sbjct: 323 DEMPEFTFEAGE--EGMAVANLLKEAGLVASTSEAMRMVKQGAVKMDGEKVADQK 375


>gi|182419881|ref|ZP_02951119.1| tyrosyl-tRNA synthetase [Clostridium butyricum 5521]
 gi|237668980|ref|ZP_04528964.1| tyrosine--tRNA ligase [Clostridium butyricum E4 str. BoNT E BL5262]
 gi|182376250|gb|EDT73834.1| tyrosyl-tRNA synthetase [Clostridium butyricum 5521]
 gi|237657328|gb|EEP54884.1| tyrosine--tRNA ligase [Clostridium butyricum E4 str. BoNT E BL5262]
          Length = 416

 Score =  105 bits (261), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 94/352 (26%), Positives = 167/352 (47%), Gaps = 22/352 (6%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D +A  +H GH   L  +  LQ  GHK + ++G  T  IGDP+ + + R+ + ++++
Sbjct: 57  LGLDPSAPDIHLGHTVVLRKMKQLQDLGHKIVIIIGDFTGKIGDPTGKAKGRKALSTEQV 116

Query: 100 QENIEKI-KGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
            EN +   K IF    K    KTD     N  WL  + + + ++ + S  +V RML  E 
Sbjct: 117 LENAKTYEKQIFKILDKE---KTDVRF--NSEWLSKLSFEETIK-LASTMTVARMLERED 170

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
            + R + +  +S  EF Y ++Q YD V L    +  +++GG+DQ  N++ G  L +    
Sbjct: 171 FKKRYESQIPISIHEFFYPLMQGYDSVVL----NADIELGGTDQRFNVLMGRMLQKEYGQ 226

Query: 219 PKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT 277
                +  PLL    G  KM K+L   I ++++  +   F +  R I D  ++ +   +T
Sbjct: 227 ESQTTIFMPLLEGLDGKEKMSKSLGNYIGIDED--ADVMFEKAMR-IPDELIIKYFNLVT 283

Query: 278 TLPMSEIDRMAK-LQGKEIN--EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQ 334
            +    I+ + K L    IN  + K  +A EIT + +  E+ + A     + F       
Sbjct: 284 DIHPDIIEGIEKELNDGSINPRDIKMRLAREITLLYNNEEKTKSAEERFKKVFQKGQIPD 343

Query: 335 HMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISN 386
           ++  I ++K+     + +  ++V   F  S NE RR      +K+N + IS+
Sbjct: 344 NIEVIKVNKN----NLDISEILVNNNFVKSKNELRRISNQGGLKVNENKISD 391


>gi|325271186|ref|ZP_08137739.1| tyrosyl-tRNA synthetase [Pseudomonas sp. TJI-51]
 gi|324103697|gb|EGC00991.1| tyrosyl-tRNA synthetase [Pseudomonas sp. TJI-51]
          Length = 399

 Score =  105 bits (261), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 93/339 (27%), Positives = 154/339 (45%), Gaps = 18/339 (5%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   +  L   Q+ GH+ I L+G  T +IGDPS +  +R  +  +++ 
Sbjct: 39  GFDPTAPDLHLGHTVLINKLRQFQELGHQVIFLIGDFTGMIGDPSGKSATRPPLTREQVL 98

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           +N E  K     F      KT+     N TW+  +   D +R + S ++V RML  +   
Sbjct: 99  DNAETYKQ--QVFKILDPAKTEVAF--NSTWMDKLTPADFIR-LASQYTVARMLERDDFD 153

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R    Q ++  EF Y ++Q YD V L  +    +++GG+DQ  N++ G +L        
Sbjct: 154 KRYTTNQPIAIHEFLYPLVQGYDSVALKAD----VELGGTDQKFNLLMGRELQRAYGQEA 209

Query: 221 LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTL 279
              +T PLL    G  KM K+L   + + +   +P   +    +I D  +  + + L+  
Sbjct: 210 QNIVTMPLLEGLDGVKKMSKSLGNYVGIQE---APGVMYSKLVSIPDTLMWRYFELLSFR 266

Query: 280 PMSEID--RMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMP 337
            M EI+  R     G    + K  +A EI    HG E A  A  AA          + +P
Sbjct: 267 SMEEIEQFRADVANGANPRDIKIKLAEEIVARFHGEEAAANAHRAAGNRMKEGELPEDLP 326

Query: 338 TISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNA 376
            + +   E   G+ +  ++ +AG   ++ +AR  L + A
Sbjct: 327 EVEVVSAE---GLPIAAVLNRAGLVKNSAQARDLLSAGA 362


>gi|302873370|ref|YP_003842003.1| tyrosyl-tRNA synthetase [Clostridium cellulovorans 743B]
 gi|307688462|ref|ZP_07630908.1| tyrosyl-tRNA synthetase [Clostridium cellulovorans 743B]
 gi|302576227|gb|ADL50239.1| tyrosyl-tRNA synthetase [Clostridium cellulovorans 743B]
          Length = 401

 Score =  105 bits (261), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 98/358 (27%), Positives = 168/358 (46%), Gaps = 34/358 (9%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D +A  +H GH   L  +  LQ  GHK I ++G  T  IGDP+ + + R+ + ++++
Sbjct: 42  LGLDPSAPDIHLGHTVVLRKMKQLQDLGHKVIVIIGDFTGKIGDPTGKTKGRKALTTEQV 101

Query: 100 QENIEKIK-GIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
            EN    +  IF    K    KT+     N  WL  + + + ++ + +  +V RML  E 
Sbjct: 102 LENARTYETQIFKVLDK---DKTEVRF--NSEWLSQLSFEETIK-LAATMTVARMLEREE 155

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
            + R + +  +S  EF Y ++Q YD V +  +    +++GG+DQ  N++ G  L +    
Sbjct: 156 FKKRYENQVPISVHEFFYPLMQGYDSVAIHAD----IELGGTDQRFNVLMGRMLQKEYGQ 211

Query: 219 PKLFALTSPLLTTASGT-KMGKTLSGAIWLN--------KEMTSPYNF-WQYWRNIDDAD 268
                +  PLL    G  KM K+L   I ++        K MT P N   +Y+  + D  
Sbjct: 212 EPQTTIFMPLLEGLDGKEKMSKSLGNYIGIDEKAEVMYEKAMTVPDNLIIKYFNLVTDMH 271

Query: 269 VVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFD 328
                +  +TL      R  K+  ++I   K  +A EI  + HG +EAEKA    M  F 
Sbjct: 272 PDKVKELESTL------RDEKVNPRDI---KMRLAKEIVRLYHGEKEAEKAEERFMLIFQ 322

Query: 329 MSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISN 386
                  + T+++S++    G     ++V   F  S ++ RR +    +KINN+I+ +
Sbjct: 323 KGKIPTDIETVNVSENNFDIG----EILVSEKFVASKSDLRRLIDQGGVKINNNILKD 376


>gi|254524608|ref|ZP_05136663.1| tyrosyl-tRNA synthetase [Stenotrophomonas sp. SKA14]
 gi|219722199|gb|EED40724.1| tyrosyl-tRNA synthetase [Stenotrophomonas sp. SKA14]
          Length = 403

 Score =  105 bits (261), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 103/399 (25%), Positives = 172/399 (43%), Gaps = 58/399 (14%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   L  +   Q  GH+ I L+G  T +IGDPS +  +R+ +  +++ 
Sbjct: 39  GFDPTAPDLHLGHTVLLNKMRQFQDLGHQVIFLIGDFTGMIGDPSGKSLTRKPLSREDVL 98

Query: 101 ENIEKI-KGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
            N     + +F    +  T     +  N+E W   +   D++R  G   +V RML  +  
Sbjct: 99  ANARTYEEQVFKVLDRSRT----EVRFNSE-WFGKMGAADMIRLAGQ-HTVARMLERDDF 152

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R   +QS++  EF Y ++Q YD V L    +  +++GG+DQ  N++ G  L E     
Sbjct: 153 AKRYAAQQSIAIHEFLYPLVQGYDSVAL----EADVELGGTDQKFNLLMGRGLQEHHGQK 208

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEM------TSPYNFWQYWR-------NID 265
               LT PLL    G  KM K+L   I +++        T   +    WR       +I 
Sbjct: 209 PQVVLTMPLLEGLDGVNKMSKSLGNYIGISEPAIDIVTKTMKVDDTLMWRWIELLSFDIS 268

Query: 266 DADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEA-------EK 318
            A+ V   +++ T  ++   R+ KL+          +A E+ T  H    A       E 
Sbjct: 269 QAEAVQLREQVATGGLNP--RVVKLR----------LARELATRFHDAAAAEQAIAGWEA 316

Query: 319 AATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIK 378
           A T   +   + +    +P         + G+ +  L+  AG   S +EA R LK  A+K
Sbjct: 317 AVTGQGDITQLPLQDVAIP---------AEGLRIAALLTAAGLTPSNSEANRKLKERAVK 367

Query: 379 INNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           ++  ++ + + Q+ L  F+      L  GK+      L 
Sbjct: 368 VDGDVVEDGQ-QVLLPGFEGL----LQVGKRTFARVRLV 401


>gi|113954030|ref|YP_731401.1| tyrosyl-tRNA synthetase [Synechococcus sp. CC9311]
 gi|113881381|gb|ABI46339.1| tyrosyl-tRNA synthetase [Synechococcus sp. CC9311]
          Length = 415

 Score =  105 bits (261), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 98/385 (25%), Positives = 164/385 (42%), Gaps = 41/385 (10%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D T S +H GH      L   Q  GH  + ++G  T+ IGDP+ +  +R  + ++++
Sbjct: 50  LGIDPTGSDIHLGHSILFRKLRAFQDAGHTAVLIIGDFTARIGDPTGKSATRVQLTTEQV 109

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALM----------LNNETWLCSIKYIDLLREIGSFFS 149
           + N       +   +  G  K  AL+            N  WL  +    ++  +G+  +
Sbjct: 110 EANAT----TYLRQLGQGQPKERALLDFETPGRLEVRRNSEWLGGLDLPQVIGLLGT-AT 164

Query: 150 VNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICG 209
           V +ML+ +    R      ++  EF Y +LQ YD V +    D  +++GG+DQ  N+  G
Sbjct: 165 VGQMLAKDDFSKRYGSGTPIALHEFLYPLLQGYDSVAV----DADVELGGTDQKFNVAMG 220

Query: 210 IDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDAD 268
            DL         F L  P+L    G  KM K+L   + L  +   P + +     + DA 
Sbjct: 221 RDLQRHFGQRTQFGLLLPILVGLDGVQKMSKSLGNTVGLEDD---PLSMYSKLEKVGDAA 277

Query: 269 VVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKA-ATAAMECF 327
           +  +   LT LP        +       + +K +A  +T   +G E A+KA A AA    
Sbjct: 278 INDYLMLLTDLPDESFPDNPR-------DKQKAMALVVTASRYGMEVAQKAQADAATLVG 330

Query: 328 DMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNE 387
                S  +P  S+S   V+       L+   G   S++EARR +K  A ++    I++ 
Sbjct: 331 GSGAASADVPEASLSA--VNFPAKAFYLLSAVGICASSSEARRQIKGGAARLEGEKITDP 388

Query: 388 KLQIKLQDFDSTGNIK---LSFGKK 409
                 Q+F S   ++   L  GKK
Sbjct: 389 N-----QEFVSASELEGKVLQLGKK 408


>gi|332678286|gb|AEE87415.1| Tyrosyl-tRNA synthetase cluster 1 [Francisella cf. novicida Fx1]
          Length = 396

 Score =  105 bits (261), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 98/360 (27%), Positives = 170/360 (47%), Gaps = 36/360 (10%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G D TA  +H GH   +  L  LQ  GH+   L+G  T+ IGDP+ ++ +R  + ++E+ 
Sbjct: 39  GCDPTAPDIHLGHTVVINKLKQLQDLGHEIHFLIGDFTAQIGDPTGKNATRPPLTAEEVA 98

Query: 101 ENIEK-IKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
            N E   K +F    K  T     ++  N  W   +   ++++ + S  +V RML  +  
Sbjct: 99  ANAETYTKQVFKILDKDKT-----VIRRNGDWFNKMSASEMIK-LASKSTVARMLERDDF 152

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R K  QS+S  EF Y ++Q YD V  A N D  +++GG+DQ  N++ G +L ++    
Sbjct: 153 SKRYKGGQSISIHEFLYPLVQGYDSV--AMNAD--IELGGTDQKFNLLMGRELQKQQGQE 208

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYN---------FWQYWRNIDDADV 269
               +T PLL    G  KM K+    I + +     +           W+Y+      ++
Sbjct: 209 PQVIITMPLLEGLDGVKKMSKSSQNYIGIEEPANEIFGKIMSISDELMWRYY------EL 262

Query: 270 VSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDM 329
           +SF K L  +   + D  A    ++I   K  +A E+    H + +AE     A + F  
Sbjct: 263 LSF-KSLENIAKLKQDVAAGANPRDI---KIELAKELIERFHSKGDAE----IAHQDFIQ 314

Query: 330 SIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKL 389
                 +P   I+  E+++ + +  L+ +AG   ST+EA R ++  A+KI+   +S+ K+
Sbjct: 315 RFQKNQIPD-DINVVELNQELPIANLLKEAGLVASTSEANRMIQQGAVKIDGEKLSDGKI 373


>gi|313682974|ref|YP_004060712.1| tyrosyl-tRNA synthetase [Sulfuricurvum kujiense DSM 16994]
 gi|313155834|gb|ADR34512.1| tyrosyl-tRNA synthetase [Sulfuricurvum kujiense DSM 16994]
          Length = 400

 Score =  105 bits (261), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 101/368 (27%), Positives = 174/368 (47%), Gaps = 28/368 (7%)

Query: 37  TAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRS 96
           T   G+D TA  LH GH   L  L   QK G     L+G  T+ IGDP+ + E+R+ +  
Sbjct: 37  TVKAGFDPTAPDLHLGHTVLLQKLSVFQKFGAHIQFLIGDFTAQIGDPTGKSETRKKLLP 96

Query: 97  QEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSF 156
            ++ EN +  K       K    +   ++ N+E W+  +    +L E+ + ++V RML  
Sbjct: 97  AQVLENAQSYK---DQVFKILDPEKTTVVFNSE-WINPLGAAGML-ELTTTYNVARMLER 151

Query: 157 ESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL 216
           +    R K   S+S  EF Y +LQ YD V L  +    +++GG+DQ  N++ G  L    
Sbjct: 152 DDFDKRYKGGISISISEFLYPLLQGYDSVHLKSD----IEIGGTDQKFNLLMGRHLQRVY 207

Query: 217 KTPKLFA-LTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAK 274
           +  K  A L  P+L    G  KM K+L   I +   + +P + +    +I D  +  + +
Sbjct: 208 EIGKEQAVLMMPILEGLDGVQKMSKSLGNYIGV---VEAPNDMYGKVLSISDTLMWRYYE 264

Query: 275 RLTTLPMSEIDRM------AKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFD 328
            L+   + EID +        L  K++ EA   +A EIT   H  E AE A         
Sbjct: 265 LLSAKSLDEIDVLKTGVENGTLHPKKVKEA---LAIEITARFHSAEAAEGAHAEFER--- 318

Query: 329 MSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEK 388
             +H+Q      + +  +   + +   +V    + ST++ARR +K  ++KI+ + +S+E+
Sbjct: 319 --VHAQSEIPSEMDEFSLEGPIWIAKALVDCSLSPSTSQARREIKQGSVKIDQNKLSDEQ 376

Query: 389 LQIKLQDF 396
            Q++  ++
Sbjct: 377 YQLEAGEY 384


>gi|89072503|ref|ZP_01159075.1| tyrosyl-tRNA synthetase [Photobacterium sp. SKA34]
 gi|89051607|gb|EAR57060.1| tyrosyl-tRNA synthetase [Photobacterium sp. SKA34]
          Length = 395

 Score =  105 bits (261), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 100/373 (26%), Positives = 166/373 (44%), Gaps = 26/373 (6%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  L   Q+ GH+   L+G  T ++GDP+ ++ +R  +  +++
Sbjct: 38  LGADPTAPDIHLGHTVILNKLRTFQELGHEVTFLIGDFTGMVGDPTGKNTTRPPLTREDV 97

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
             N E  K     F      KT      N TWL  +    ++R + S  +V RML  +  
Sbjct: 98  LRNAETYKE--QVFKILDPAKTTIAF--NSTWLSELGAEGMIR-LASNQTVARMLERDDF 152

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
           + R    + ++  EF Y +LQ YD V +    +  +++GG+DQ  N++ G +L +     
Sbjct: 153 KKRYGENRPIAIHEFMYPLLQGYDSVAM----ETDVELGGTDQKFNLLMGRELQKSHGQK 208

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               LT PLL    G  KM K+    I +     +P + +    +I D  + S+ + L+ 
Sbjct: 209 PQVVLTMPLLVGLDGVKKMSKSAHNYIGI---ADAPSDMFGKIMSISDDLMWSYFELLSF 265

Query: 279 LPMSEIDRM-AKLQ-GKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM 336
            PM EI +  A +  GK   + K ++A EI    H  E AE A    +  F        M
Sbjct: 266 RPMDEIAQFKADVDAGKNPRDVKFLLAREIIARFHSEEAAEAALQEFISRFQKGNLPDEM 325

Query: 337 PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
           P       E   G+ +  L+ +     ST++A R ++  A+K +   + + KL       
Sbjct: 326 PEF-----EFEAGLPIANLLKEVALVNSTSDAMRMIRQGAVKQDGEKVEDTKL------V 374

Query: 397 DSTGNIKLSFGKK 409
            + GN     GK+
Sbjct: 375 PTAGNYVFQVGKR 387


>gi|297172840|gb|ADI23803.1| tyrosyl-tRNA synthetase [uncultured gamma proteobacterium
           HF4000_47G05]
          Length = 352

 Score =  105 bits (261), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 88/321 (27%), Positives = 150/321 (46%), Gaps = 24/321 (7%)

Query: 10  SILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
            IL E   I ++ N + L +          +G+D TA  LH GH   +  +   Q  GH+
Sbjct: 23  EILVETELIERLENGKSLRV---------KVGFDPTAPDLHLGHTVLINKMRQFQDLGHE 73

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
            I L+G  T +IGDPS ++ +R  +  +EI +N    K     F      KT  ++  N 
Sbjct: 74  IIFLIGDFTGMIGDPSGKNATRPALSREEIDQNALTYKE--QVFKILDPDKT--IVDFNS 129

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
            W   +    ++R + S ++V RML  +   +R +  Q ++  EF Y ++Q YD V L  
Sbjct: 130 RWGSELGAEGMIR-LASRYTVARMLERDDFSTRYRDGQPIAIHEFLYPLMQGYDSVALKA 188

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLN 248
           +    +++GG+DQ  N++ G +L ++        LT PLL    G  KM K+L   + + 
Sbjct: 189 D----VELGGTDQKFNLLVGRELQKQYGLEPQIVLTMPLLEGLDGVQKMSKSLGNTVGIT 244

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN--EAKKIIATEI 306
           +    P   +    +I D  +  + + L+  P+++I R+ +     IN  + K  +A EI
Sbjct: 245 E---PPVEMYGKLMSISDELMWRYFELLSFRPLADIRRLQEEVTAGINPRDVKYQLAHEI 301

Query: 307 TTMVHGREEAEKAATAAMECF 327
               H   +AEKA  + +  F
Sbjct: 302 VERFHSASDAEKAHQSFVNQF 322


>gi|269961967|ref|ZP_06176322.1| tyrosyl-tRNA synthetase [Vibrio harveyi 1DA3]
 gi|269833290|gb|EEZ87394.1| tyrosyl-tRNA synthetase [Vibrio harveyi 1DA3]
          Length = 395

 Score =  105 bits (261), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 91/353 (25%), Positives = 163/353 (46%), Gaps = 20/353 (5%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH      L   Q+ GH+   L+G  T+++GDP+ ++ +R  +  +++
Sbjct: 38  LGADPTAPDIHLGHTVIFNKLRLFQELGHEVTFLIGDFTAMVGDPTGKNTTRPPLSREDV 97

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
             N E  K      +     K   +  N+E WL  +    ++R + +  +V RML  +  
Sbjct: 98  LRNAETYKEQVFKILDPAKTK---IQFNSE-WLSELGAEGMIR-LAANQTVARMLERDDF 152

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
           + R    Q ++  EF Y +LQ +D V +    +  +++GG+DQ  N++ G +L +     
Sbjct: 153 KKRYAGGQPIAIHEFMYPLLQGWDSVAM----ETDVELGGTDQKFNLLMGRELQKSHGQK 208

Query: 220 KLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               L  PLL    G  KM K+    I +++   +P   +    +I D  + S+ + L+ 
Sbjct: 209 PQVVLMMPLLVGLDGEKKMSKSSGNYIGISE---APSEMFGKIMSISDDLMWSYYELLSF 265

Query: 279 LPMSEIDRM-AKLQ-GKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM 336
            P+ EI +  A ++ GK   + K ++A EI    H   +A+ A    +  F  +     M
Sbjct: 266 RPLEEIAQFKADVEAGKNPRDIKVLLAKEIIARFHSEADADAAEQEFVNRFAKNQIPDEM 325

Query: 337 PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKL 389
           P       +   G  +  L+ +AG   ST+EA R +K  A KI    +++ K 
Sbjct: 326 PEF-----DFEAGTPVANLLKEAGLCASTSEAMRMVKQGAAKIEGEKVADAKF 373


>gi|254518268|ref|ZP_05130324.1| tyrosyl-tRNA synthetase [Clostridium sp. 7_2_43FAA]
 gi|226912017|gb|EEH97218.1| tyrosyl-tRNA synthetase [Clostridium sp. 7_2_43FAA]
          Length = 402

 Score =  104 bits (260), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 92/370 (24%), Positives = 171/370 (46%), Gaps = 22/370 (5%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D +A  +H GH   L  +  +Q  GHK + ++G  T  IGDP+ + + R+ +  +E+
Sbjct: 43  LGLDPSAPDIHLGHAVVLRKIKQMQDLGHKAVIVIGDFTGKIGDPTGKAKGRKALTDEEV 102

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
             N E  K     F      KT+     N  WL  + + D+L+ + +  +V RML  +  
Sbjct: 103 LRNAETYKT--QIFKVLDESKTEVRF--NSEWLSKLNFNDVLK-LAATTTVARMLERDDF 157

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
           ++R K    +   EF Y ++QAYD + L       +++GG+DQ  NI+ G  L + +   
Sbjct: 158 QNRYKNNVPIGVHEFFYPLMQAYDSIALK----ADIELGGTDQTFNILMGRTLQKTMGEE 213

Query: 220 KLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNF-WQYWRNIDDADVVSFAKRLT 277
              A+  P+L    G  KM K+L   I +N+    P N  ++    + D+ ++ + +  T
Sbjct: 214 GQVAMFMPILEGLDGIEKMSKSLGNYIGVNE----PANIMFKKVMEVPDSLIIKYFELAT 269

Query: 278 TLPMSEIDRMAKL--QGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQH 335
                +ID +     +G+   + K  +A  IT + H     E    +AME ++ +   + 
Sbjct: 270 DEHPDKIDEIKNRLDRGENPRDIKLELAQIITNLYH----CENEVKSAMEFYNSAFTKKE 325

Query: 336 MP-TISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
           +P  I     E ++   +++ +V   + +S  E  R ++   ++IN   I++  + +  Q
Sbjct: 326 IPDDIPNLTVESNKLRDIVSNLVSEKYVSSKKEFTRLVEQGGVQINGEKINSLDINLLTQ 385

Query: 395 DFDSTGNIKL 404
           D    G  K 
Sbjct: 386 DVIKIGKKKF 395


>gi|329909301|ref|ZP_08275030.1| Tyrosyl-tRNA synthetase [Oxalobacteraceae bacterium IMCC9480]
 gi|327546501|gb|EGF31486.1| Tyrosyl-tRNA synthetase [Oxalobacteraceae bacterium IMCC9480]
          Length = 424

 Score =  104 bits (260), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 102/383 (26%), Positives = 168/383 (43%), Gaps = 46/383 (12%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  LH GH   L  +  LQ  GH  I L+G  TS+IGDPS R+ +R  +  ++I
Sbjct: 67  LGLDPTAPDLHLGHTVVLNKMRQLQDLGHTVIFLIGDFTSMIGDPSGRNITRPALTKEQI 126

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           ++N    K  F+        +   +  N+E W C       + ++ S ++V R+L  E  
Sbjct: 127 EDN---AKTYFAQASLVLDAERTEIRYNSE-W-CDPLGARGMIQLSSKYTVARILEREDF 181

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R K    +S  E  Y ++Q YD V L  +    L++GG+DQ  N++ G +L +     
Sbjct: 182 TKRFKAGTPISVHELLYPLMQGYDSVALHAD----LELGGTDQKFNLLVGRELQKDWGQE 237

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYN---------FWQYWRNIDDADV 269
               LT PLL    G  KM K+    I + +   S +           W+Y+  +     
Sbjct: 238 PQCILTMPLLEGLDGVEKMSKSKGNYISITEPANSMFAKVMSISDTMMWRYYELLS---- 293

Query: 270 VSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDM 329
              A+ L  L   + D      G+   + K  +A EI T  H     ++A   A+  FD 
Sbjct: 294 ---ARSLAELAQFKTDVEG---GRNPRDIKVALAQEIVTRFHN----QQAGVDALADFDN 343

Query: 330 SIH---SQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISN 386
                    +P + +        +G+  L+ +A    ST+EA R ++ N ++I+   IS+
Sbjct: 344 RARGGIPDDIPEVQLG----GAPLGIGQLLKQANLCASTSEALRMVEQNGVRIDGVAISD 399

Query: 387 EKLQIKLQDFDSTGNIKLSFGKK 409
           + L+++       G   L  GK+
Sbjct: 400 KALKVE------AGTFVLQVGKR 416


>gi|110833227|ref|YP_692086.1| tyrosine-tRNA ligase [Alcanivorax borkumensis SK2]
 gi|110646338|emb|CAL15814.1| tyrosine-tRNA ligase [Alcanivorax borkumensis SK2]
          Length = 399

 Score =  104 bits (260), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 85/353 (24%), Positives = 161/353 (45%), Gaps = 22/353 (6%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   +  L   Q+ GH+ I L+G  T +IGDP+ +  +R  +  +++ 
Sbjct: 39  GFDPTAPDLHLGHTVLINKLRQFQELGHEVIFLIGDFTGMIGDPTGKSATRPPLSREDVL 98

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
            N +  K      +     + +     N +W+ +I    +++  G  ++V RML  +   
Sbjct: 99  RNADTYKEQVFKILDESKTRVEF----NSSWMNTIGAAGMIKLAGQ-YTVARMLERDDFD 153

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R K  Q ++  EF Y ++Q YD V L    +  +++GG+DQ  N++ G  L +      
Sbjct: 154 KRYKGNQPIAIHEFLYPLVQGYDSVAL----EADVELGGTDQKFNLLMGRTLQKTYGQSP 209

Query: 221 LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTL 279
              LT P+L    G  KM K+L   + +N    +P   ++   ++ D+    + + L+  
Sbjct: 210 QICLTMPILEGLDGVQKMSKSLGNYVGVND---APGEMYRKLLSLPDSLTWRYYELLSA- 265

Query: 280 PMSEIDRMAKLQGKEI-----NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQ 334
                +R+  L+ + +      EAKK  A E+    HG E A+ A  +A     +     
Sbjct: 266 --CSNERIEALKAEAVALGSPQEAKKAFALEMVERFHGVEAAQAAPKSAGNQIALGHIPD 323

Query: 335 HMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNE 387
           ++P + +   E    + +L L+ +AG   +   A+      A+ ++ + ++ E
Sbjct: 324 NVPEVEVDIGE-QESIHILPLLREAGLVQNGKAAKDVFGRGAVYLDGAQLNEE 375


>gi|90580612|ref|ZP_01236417.1| tyrosyl-tRNA synthetase [Vibrio angustum S14]
 gi|90438270|gb|EAS63456.1| tyrosyl-tRNA synthetase [Photobacterium angustum S14]
          Length = 395

 Score =  104 bits (259), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 100/373 (26%), Positives = 166/373 (44%), Gaps = 26/373 (6%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  L   Q+ GH+   L+G  T ++GDP+ ++ +R  +  +++
Sbjct: 38  LGADPTAPDIHLGHTVILNKLRTFQELGHEVTFLIGDFTGMVGDPTGKNATRPPLTREDV 97

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
             N E  K     F      KT      N TWL  +    ++R + S  +V RML  +  
Sbjct: 98  LRNAETYKE--QVFKILDPAKTTIAF--NSTWLSELGAEGMIR-LASNQTVARMLERDDF 152

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
           + R    + ++  EF Y +LQ YD V +    +  +++GG+DQ  N++ G +L +     
Sbjct: 153 KKRYGENRPIAIHEFMYPLLQGYDSVAM----ETDVELGGTDQKFNLLMGRELQKSHAQK 208

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               LT PLL    G  KM K+    I +     +P + +    +I D  + S+ + L+ 
Sbjct: 209 PQVVLTMPLLVGLDGVKKMSKSAHNYIGV---ADAPSDMFGKIMSISDDLMWSYFELLSF 265

Query: 279 LPMSEIDRM-AKLQ-GKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM 336
            PM EI +  A +  GK   + K ++A EI    H  E AE A    +  F        M
Sbjct: 266 RPMDEIAQFKADVDAGKNPRDVKFLLAKEIIARFHSEEAAEAALQEFISRFQKGNLPDEM 325

Query: 337 PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
           P       E    + +  L+ +A    ST++A R ++  A+K +   + + KL       
Sbjct: 326 PEF-----EFEASLPIANLLKEAALVNSTSDAMRMIRQGAVKQDGEKVEDTKL------V 374

Query: 397 DSTGNIKLSFGKK 409
            + GN     GK+
Sbjct: 375 PTAGNYVFQVGKR 387


>gi|262393369|ref|YP_003285223.1| tyrosyl-tRNA synthetase [Vibrio sp. Ex25]
 gi|262336963|gb|ACY50758.1| tyrosyl-tRNA synthetase [Vibrio sp. Ex25]
          Length = 395

 Score =  104 bits (259), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 89/353 (25%), Positives = 166/353 (47%), Gaps = 20/353 (5%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH      L   Q+ GH+   L+G  T+++GDP+ ++ +R  +  +++
Sbjct: 38  LGADPTAPDIHLGHTVIFNKLRLFQELGHEVTFLIGDFTAMVGDPTGKNTTRPPLSREDV 97

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
             N E  K      +     K   +  N+E WL  +    ++R + +  +V RML  +  
Sbjct: 98  LRNAETYKEQVFKILDPAKTK---IQFNSE-WLSELGAEGMIR-LAANQTVARMLERDDF 152

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
           + R    Q ++  EF Y +LQ +D V +    +  +++GG+DQ  N++ G +L +     
Sbjct: 153 KKRYAGGQPIAIHEFMYPLLQGWDSVAM----ETDVELGGTDQKFNLLMGRELQKSHGQK 208

Query: 220 KLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               L  PLL    G  KM K+ +  I +++   +P   +    +I D  + S+ + L+ 
Sbjct: 209 PQVVLMMPLLVGLDGEKKMSKSANNYIGISE---APSEMFGKIMSISDDLMWSYYELLSF 265

Query: 279 LPMSEIDRM-AKLQ-GKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM 336
            P+ EI +  A ++ GK   + K ++A EI    H   +A+ A    +  F  +     M
Sbjct: 266 RPLEEIAQFKADVEAGKNPRDIKVLLAKEIIARFHSEADADAAEQEFVNRFAKNQIPDEM 325

Query: 337 PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKL 389
           P       +   G  +  L+ +AG   S+++A R +K  A+K++   I++ K 
Sbjct: 326 PEF-----DFDAGRPVSNLLKEAGLCPSSSDAMRMVKQGAVKMDGEKIADSKF 373


>gi|72382739|ref|YP_292094.1| tyrosyl-tRNA synthetase [Prochlorococcus marinus str. NATL2A]
 gi|115305816|sp|Q46JD7|SYY_PROMT RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|72002589|gb|AAZ58391.1| tyrosyl-tRNA synthetase [Prochlorococcus marinus str. NATL2A]
          Length = 415

 Score =  104 bits (259), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 107/382 (28%), Positives = 177/382 (46%), Gaps = 35/382 (9%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D T + +H GH      L   Q  GH  I ++G  T+ IGDP+ + ++R  +   E+
Sbjct: 50  LGIDPTGTDIHIGHSILFRKLRAFQDAGHTAILIIGDFTARIGDPTGKSKTRIQLSKDEV 109

Query: 100 QEN----IEKI---KGIFSSFIKYGTGKTDALMLNNETWLCSI---KYIDLLREIGSFFS 149
           Q N    +E++   K    S + +       +  N+E WL ++   K I+LL    S  +
Sbjct: 110 QSNALNYLEQLGLGKDPKDSLLDFSIPSRIEIRRNSE-WLENLNLSKVIELL----SNST 164

Query: 150 VNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICG 209
           V +ML+ E   +R K    +S  EF Y +LQ YD V  A N D   ++GG+DQ  NI  G
Sbjct: 165 VGQMLAKEDFSNRYKSGTPISLHEFLYPLLQGYDSV--AINSDV--ELGGTDQKFNIAMG 220

Query: 210 IDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDAD 268
            DL +       F +  P+L    G  KM K+L   + +N++  S Y+  +    + D  
Sbjct: 221 RDLQKAFGQKPQFGMLLPILVGLDGARKMSKSLDNIVGINEDSLSMYSKLE---KVPDDL 277

Query: 269 VVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFD 328
           V+++   LT   + E+    +       E +K +A ++T+   G E A+ A   + +   
Sbjct: 278 VLTYLNLLTNENLKELSSNPR-------EVQKFMALKVTSNFKGIEAAKNAQFNSEKLVL 330

Query: 329 MSIHS-QHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNE 387
            +  S + +P  S+S   V+       L  K    +S++EARR +    ++I+   I + 
Sbjct: 331 GTKDSLEEIPEASVSN--VNFPAKAFYLFSKMEMCSSSSEARRQILGGGVRIDGKKIMDP 388

Query: 388 KLQIKLQDFDSTGNIKLSFGKK 409
            L+    D D  G I L  GKK
Sbjct: 389 NLEFHTPD-DLIGKI-LQVGKK 408


>gi|262281575|ref|ZP_06059354.1| tyrosyl-tRNA synthetase [Acinetobacter calcoaceticus RUH2202]
 gi|262257034|gb|EEY75773.1| tyrosyl-tRNA synthetase [Acinetobacter calcoaceticus RUH2202]
          Length = 410

 Score =  104 bits (259), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 94/375 (25%), Positives = 165/375 (44%), Gaps = 28/375 (7%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           I+SE   + ++   R L I           G+D TA  LH GH   +  L   Q  GH+ 
Sbjct: 27  IISEEDLLKKLKENRPLKIKA---------GFDPTAPDLHLGHTVLINKLKTFQDLGHEV 77

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
             L+G  T++IGDP+ +  +R  +  ++++ N +  +     F      KT      N  
Sbjct: 78  TFLIGDYTAMIGDPTGKSATRPPLSREQVEANAKTYQE--QVFKILDPNKTKVRF--NSE 133

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           W       DL+ ++ S  +V+RML  +    R    Q ++  EF Y ++Q YD + L   
Sbjct: 134 WFNQKSAADLI-QLASQQTVSRMLERDDFTKRYSNHQPIAIHEFLYPLVQGYDSIAL--- 189

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNK 249
            +  +++GG+DQ  N++ G  L  R        +T P+L    G  KM K+L   I +  
Sbjct: 190 -EADVELGGTDQTFNLLMGRTLQSRYGQESQVCITVPILEGLDGVNKMSKSLGNYIGV-- 246

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI----DRMAKLQGKEINEAKKIIATE 305
              +P   +Q   ++ D+ +  +   L+   + EI    D +A   G+   E K+I+A E
Sbjct: 247 -FDTPGAMYQKVLSMPDSLIERYFDLLSFKSLDEIKTLLDEIAA--GRNPQEVKRILALE 303

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           +    H  E A  A  +A          +  P ++IS+ E    + + T++  AG   + 
Sbjct: 304 LVERFHDAEAAANAHKSAGNLITEGEVPEDTPEMTISRGEFGGEIFIATILRLAGLNPNA 363

Query: 366 NEARRHLKSNAIKIN 380
             A+  +   A+K++
Sbjct: 364 AAAKDAVARGAVKVD 378


>gi|184159979|ref|YP_001848318.1| tyrosyl-tRNA synthetase [Acinetobacter baumannii ACICU]
 gi|213155371|ref|YP_002317416.1| tyrosyl-tRNA synthetase [Acinetobacter baumannii AB0057]
 gi|215481775|ref|YP_002323957.1| tyrosyl-tRNA synthetase [Acinetobacter baumannii AB307-0294]
 gi|239503896|ref|ZP_04663206.1| tyrosyl-tRNA synthetase [Acinetobacter baumannii AB900]
 gi|260558106|ref|ZP_05830317.1| tyrosyl-tRNA synthetase [Acinetobacter baumannii ATCC 19606]
 gi|301347692|ref|ZP_07228433.1| tyrosyl-tRNA synthetase [Acinetobacter baumannii AB056]
 gi|301513278|ref|ZP_07238515.1| tyrosyl-tRNA synthetase [Acinetobacter baumannii AB058]
 gi|301596725|ref|ZP_07241733.1| tyrosyl-tRNA synthetase [Acinetobacter baumannii AB059]
 gi|332854727|ref|ZP_08435514.1| tyrosine--tRNA ligase [Acinetobacter baumannii 6013150]
 gi|332867406|ref|ZP_08437584.1| tyrosine--tRNA ligase [Acinetobacter baumannii 6013113]
 gi|332873321|ref|ZP_08441276.1| tyrosine--tRNA ligase [Acinetobacter baumannii 6014059]
 gi|183211573|gb|ACC58971.1| Tyrosyl-tRNA synthetase [Acinetobacter baumannii ACICU]
 gi|213054531|gb|ACJ39433.1| tyrosyl-tRNA synthetase [Acinetobacter baumannii AB0057]
 gi|213986874|gb|ACJ57173.1| tyrosyl-tRNA synthetase [Acinetobacter baumannii AB307-0294]
 gi|260408460|gb|EEX01767.1| tyrosyl-tRNA synthetase [Acinetobacter baumannii ATCC 19606]
 gi|323519901|gb|ADX94282.1| tyrosyl-tRNA synthetase [Acinetobacter baumannii TCDC-AB0715]
 gi|332727884|gb|EGJ59286.1| tyrosine--tRNA ligase [Acinetobacter baumannii 6013150]
 gi|332734002|gb|EGJ65144.1| tyrosine--tRNA ligase [Acinetobacter baumannii 6013113]
 gi|332738527|gb|EGJ69399.1| tyrosine--tRNA ligase [Acinetobacter baumannii 6014059]
          Length = 410

 Score =  104 bits (259), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 94/379 (24%), Positives = 167/379 (44%), Gaps = 28/379 (7%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           I+SE   + ++   R L I           G+D TA  LH GH   +  L   Q  GH+ 
Sbjct: 27  IISEEDLLKKLKENRPLKIKA---------GFDPTAPDLHLGHTVLINKLKTFQDLGHEV 77

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
             L+G  T++IGDP+ +  +R  +  ++++ N +  +     F      KT      N  
Sbjct: 78  TFLIGDYTAMIGDPTGKSATRPPLSREQVEANAKTYQE--QVFKILDPNKTKVRF--NSE 133

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           W       DL+ ++ S  +V+RML  +    R    Q ++  EF Y ++Q YD + L   
Sbjct: 134 WFNQKSAADLI-QLASQQTVSRMLERDDFTKRYNNHQPIAIHEFLYPLVQGYDSIAL--- 189

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNK 249
            +  +++GG+DQ  N++ G  L  R        +T P+L    G  KM K+L   I +  
Sbjct: 190 -EADVELGGTDQTFNLLMGRTLQSRYGQESQVCITVPILEGLDGVNKMSKSLGNYIGV-- 246

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI----DRMAKLQGKEINEAKKIIATE 305
              +P   +Q   ++ D+ +  +   L+   + EI    D +A   G+   E K+I+A E
Sbjct: 247 -FDAPGAMYQKVLSMPDSLIERYFDLLSFKSLDEIKALLDEIAA--GRNPQEVKRILALE 303

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           +    H  E A  A  +A             P ++IS+ E    + + T++  AG   + 
Sbjct: 304 LVERFHDAEAAANAHKSAGNRITEGEVPADTPEVTISRGEFGGEIFIATILRVAGLNPNA 363

Query: 366 NEARRHLKSNAIKINNSII 384
             A+  +   A+K++ +++
Sbjct: 364 AAAKDAVARGAVKVDWNVV 382


>gi|332530284|ref|ZP_08406230.1| tyrosyl-tRNA synthetase [Hylemonella gracilis ATCC 19624]
 gi|332040270|gb|EGI76650.1| tyrosyl-tRNA synthetase [Hylemonella gracilis ATCC 19624]
          Length = 415

 Score =  104 bits (259), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 98/367 (26%), Positives = 169/367 (46%), Gaps = 41/367 (11%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  L  LQ  GH+ I L+G  TS+IGDPS R+ +R  + S++I
Sbjct: 54  LGLDPTAPDIHLGHTVVLNKLRQLQDLGHQVIFLIGDFTSLIGDPSGRNSTRPPLTSEQI 113

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLN---NETWLCSIKYIDLLREIGSFFSVNRMLSF 156
           + N E       ++ K  +   D        N  W   +  + ++ ++ + ++V RM+  
Sbjct: 114 KANAE-------TYYKQASLVLDPQRTEIRYNSEWCLPLGSMGMI-QLAAKYTVARMMER 165

Query: 157 ESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL 216
           +    R +    +S  EF Y ++Q YD V L  +    L++GG+DQ  N++ G  L +  
Sbjct: 166 DDFTKRYQAGTPISVHEFLYPLMQGYDSVALKSD----LELGGTDQKFNLLMGRHLQQEH 221

Query: 217 KTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKR 275
                  LT PLL    G  KM K+    I ++++  + Y           A V+S +  
Sbjct: 222 GQEPQCILTMPLLVGLDGVDKMSKSKHNYIGISEDANTMY-----------AKVLSISDV 270

Query: 276 L-----TTLPMSEIDRMAKLQ-----GKEINEAKKIIATEITTMVHGREEAEKAATAAME 325
           L     T L    +  +A L+     G+   +AK  +A EITT  HG   AE A    + 
Sbjct: 271 LMWDWYTLLSFKSLAEIAALKKEVEAGRNPKDAKVALAKEITTRFHGAAAAEAAEQDFIN 330

Query: 326 CFDMSIHSQ-HMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSII 384
                I  +    T+++   E    +G+  L+ +AG   S+ E  R +    ++++ + +
Sbjct: 331 RSKGGIPDEVEEQTLAL---EGGAPVGIAALLKQAGLVASSGEGNRLIDGGGVRVDGNTV 387

Query: 385 SNEKLQI 391
           S++ L++
Sbjct: 388 SDKGLKL 394


>gi|108762063|ref|YP_631185.1| tyrosyl-tRNA synthetase [Myxococcus xanthus DK 1622]
 gi|108465943|gb|ABF91128.1| tyrosyl-tRNA synthetase [Myxococcus xanthus DK 1622]
          Length = 420

 Score =  104 bits (259), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 94/373 (25%), Positives = 162/373 (43%), Gaps = 44/373 (11%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D +   LH GH   L  +   Q+ GH  + L+G  T +IGDP+ R+ +R  +   E++
Sbjct: 50  GFDPSRPDLHLGHSLLLTRMRRFQEFGHTVVFLIGDFTGLIGDPTGRNATRPALTRDEVK 109

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
            N E  K     F      KT      N +WL S+    ++R + S +SV RML  +  +
Sbjct: 110 ANAETYKK--QVFKVLDESKTQVRF--NSSWLDSLGTEGMIR-LASRYSVQRMLERDDFK 164

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R + E S+S  EF Y +LQ YD V L  +    +++G +DQ  N++ G  L +      
Sbjct: 165 KRFRGEVSISIHEFLYPLLQGYDSVVLKAD----VELGATDQLFNLLVGRQLMKEEGMAP 220

Query: 221 LFALTSPLLTTAS---------GTKMGKTLSGAIWLNKEMTSPYN---------FWQYWR 262
              +T P+L   +         G KM K+L   + +++   + +           W+Y+ 
Sbjct: 221 QVIMTGPILEGLNAKAVDGKIVGDKMSKSLDNYVGIDEPADTIFGKLMSITDDLMWRYY- 279

Query: 263 NIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATA 322
                +++S   R     M        L  K +   K   A E+T    G E  +KAA  
Sbjct: 280 -----ELLSAKTRAELAEMRAQVESGALHPKAV---KVGFAQEMTARFQGEEAGKKAA-- 329

Query: 323 AMECFDMSIHSQHMPTISISKDEVSRG----MGLLTLIVKAGFATSTNEARRHLKSNAIK 378
             E F+     + + T  +   EVS G    + +  L+ ++    S  EAR+ +    ++
Sbjct: 330 --EDFEKRFAKKELSTDELPLVEVSLGGAEKLPVTKLLPESKLVASATEARKLMAQGGVR 387

Query: 379 INNSIISNEKLQI 391
           +N   + + K ++
Sbjct: 388 VNGEKVQDVKAEL 400


>gi|91202965|emb|CAJ72604.1| strongly similar to tyrosyl-tRNA ligase [Candidatus Kuenenia
           stuttgartiensis]
          Length = 404

 Score =  104 bits (259), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 100/373 (26%), Positives = 173/373 (46%), Gaps = 22/373 (5%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H G+   +  L   Q  GH  I ++G  T+++GDPS  +++R M+   ++
Sbjct: 43  LGLDPTAPDIHIGNAIPIHKLRAFQSLGHTAILIIGDYTAVVGDPSGVNKTRPMITHDKV 102

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
            EN +         +     KT+ +   N  W  S+ + D+++ + S  +V RM+  +  
Sbjct: 103 LENAKTYLTQAGKILDM--DKTEVVY--NSKWFKSMTFNDVIQLV-SKMTVARMMERDDF 157

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R K    +S  EF Y ++Q YD + + KN    +++GG+DQ  +++ G DL +     
Sbjct: 158 SKRYKAGSPISLHEFIYPLMQGYDSI-MVKN---DVELGGTDQLFSLLVGRDLQKDAGME 213

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSP-YNFWQYWRNIDDADVVSFAKRLT 277
               LT+ LL    G  KM K+L+  I +    T P    +    +I D  +  + +  T
Sbjct: 214 PQVVLTTSLLEGIDGNKKMSKSLNNYIGI----TEPSREMFGKVMSIPDNLMRKYFELAT 269

Query: 278 TLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMP 337
            + + +I ++   +      AK  +A  I T  H  + AE AA      F        +P
Sbjct: 270 DVSIEDIQQLLD-EKTHPRTAKVALAKAIVTRYHNLQAAEAAAEEFDRVFKEGALPDEIP 328

Query: 338 TISISKDEVSRGMGLLT-LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
            ISI   E+  G   +T LIV   FA +  EARR ++   + +N+  I++  L I++   
Sbjct: 329 IISIPDGELENGKIWITKLIVSCKFAATNGEARRLIQQGGVSVNSETINDPTLNIEI--- 385

Query: 397 DSTGNIKLSFGKK 409
             T  + L  GK+
Sbjct: 386 --TPGMTLKVGKR 396


>gi|169632044|ref|YP_001705780.1| tyrosyl-tRNA synthetase [Acinetobacter baumannii SDF]
 gi|169794220|ref|YP_001712013.1| tyrosyl-tRNA synthetase [Acinetobacter baumannii AYE]
 gi|169147147|emb|CAM85006.1| tyrosyl-tRNA synthetase [Acinetobacter baumannii AYE]
 gi|169150836|emb|CAO99439.1| tyrosyl-tRNA synthetase [Acinetobacter baumannii]
 gi|193075934|gb|ABO10511.2| tyrosyl-tRNA synthetase [Acinetobacter baumannii ATCC 17978]
          Length = 404

 Score =  104 bits (259), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 94/379 (24%), Positives = 167/379 (44%), Gaps = 28/379 (7%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           I+SE   + ++   R L I           G+D TA  LH GH   +  L   Q  GH+ 
Sbjct: 21  IISEEDLLKKLKENRPLKIKA---------GFDPTAPDLHLGHTVLINKLKTFQDLGHEV 71

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
             L+G  T++IGDP+ +  +R  +  ++++ N +  +     F      KT      N  
Sbjct: 72  TFLIGDYTAMIGDPTGKSATRPPLSREQVEANAKTYQE--QVFKILDPNKTKVRF--NSE 127

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           W       DL+ ++ S  +V+RML  +    R    Q ++  EF Y ++Q YD + L   
Sbjct: 128 WFNQKSAADLI-QLASQQTVSRMLERDDFTKRYNNHQPIAIHEFLYPLVQGYDSIAL--- 183

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNK 249
            +  +++GG+DQ  N++ G  L  R        +T P+L    G  KM K+L   I +  
Sbjct: 184 -EADVELGGTDQTFNLLMGRTLQSRYGQESQVCITVPILEGLDGVNKMSKSLGNYIGV-- 240

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI----DRMAKLQGKEINEAKKIIATE 305
              +P   +Q   ++ D+ +  +   L+   + EI    D +A   G+   E K+I+A E
Sbjct: 241 -FDAPGAMYQKVLSMPDSLIERYFDLLSFKSLDEIKALLDEIAA--GRNPQEVKRILALE 297

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           +    H  E A  A  +A             P ++IS+ E    + + T++  AG   + 
Sbjct: 298 LVERFHDAEAAANAHKSAGNRITEGEVPADTPEVTISRGEFGGEIFIATILRVAGLNPNA 357

Query: 366 NEARRHLKSNAIKINNSII 384
             A+  +   A+K++ +++
Sbjct: 358 AAAKDAVARGAVKVDWNVV 376


>gi|322506181|gb|ADX01635.1| Tyrosyl-tRNA synthetase [Acinetobacter baumannii 1656-2]
          Length = 410

 Score =  104 bits (259), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 94/379 (24%), Positives = 167/379 (44%), Gaps = 28/379 (7%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           I+SE   + ++   R L I           G+D TA  LH GH   +  L   Q  GH+ 
Sbjct: 27  IISEEDLLKKLKENRPLKIKA---------GFDPTAPDLHLGHTVLINKLKTFQDLGHEV 77

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
             L+G  T++IGDP+ +  +R  +  ++++ N +  +     F      KT      N  
Sbjct: 78  TFLIGDYTAMIGDPTGKSATRPPLSREQVEANAKTYQE--QVFKILDPNKTKVRF--NSE 133

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           W       DL+ ++ S  +V+RML  +    R    Q ++  EF Y ++Q YD + L   
Sbjct: 134 WFNQKSAADLI-QLASQQTVSRMLERDDFTKRYNNHQPIAIHEFLYPLVQGYDSIAL--- 189

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNK 249
            +  +++GG+DQ  N++ G  L  R        +T P+L    G  KM K+L   I +  
Sbjct: 190 -EADVELGGTDQTFNLLMGRTLQSRYGQESQVCITVPILEGLDGVNKMSKSLGNYIGV-- 246

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI----DRMAKLQGKEINEAKKIIATE 305
              +P   +Q   ++ D+ +  +   L+   + EI    D +A   G+   E K+I+A E
Sbjct: 247 -FDAPGAMYQKVLSMPDSLIERYFDLLSFKSLDEIKALLDEIAA--GRNPQEVKRILALE 303

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           +    H  E A  A  +A             P ++IS+ E    + + T++  AG   + 
Sbjct: 304 LVERFHDAEAAANAHKSAGNRITEGEVPADTPEVTISRGEFGGEIFIATILRVAGLNPNA 363

Query: 366 NEARRHLKSNAIKINNSII 384
             A+  +   A+K++ +++
Sbjct: 364 AAAKDAVARGAVKVDWNVV 382


>gi|37680907|ref|NP_935516.1| tyrosyl-tRNA synthetase [Vibrio vulnificus YJ016]
 gi|320155426|ref|YP_004187805.1| tyrosyl-tRNA synthetase, cluster 1 [Vibrio vulnificus MO6-24/O]
 gi|326423868|ref|NP_760572.2| tyrosyl-tRNA synthetase [Vibrio vulnificus CMCP6]
 gi|81756673|sp|Q7MHZ4|SYY2_VIBVY RecName: Full=Tyrosyl-tRNA synthetase 2; AltName:
           Full=Tyrosine--tRNA ligase 2; Short=TyrRS 2
 gi|37199657|dbj|BAC95487.1| Tyrosyl-tRNA synthetase [Vibrio vulnificus YJ016]
 gi|319930738|gb|ADV85602.1| tyrosyl-tRNA synthetase cluster 1 [Vibrio vulnificus MO6-24/O]
 gi|319999241|gb|AAO10099.2| tyrosyl-tRNA synthetase [Vibrio vulnificus CMCP6]
          Length = 395

 Score =  104 bits (259), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 89/354 (25%), Positives = 161/354 (45%), Gaps = 20/354 (5%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  L   Q  GH    L+G  T ++GDP+ ++ +R  +  +++
Sbjct: 38  LGADPTAPDIHLGHTVILNKLRAFQDLGHDVTFLIGDFTGMVGDPTGKNSTRPPLTREDV 97

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
             N E  K      +     K   +  N+E WL  +    ++R + +  +V RML  +  
Sbjct: 98  LRNAETYKQQVFKILDPAKTK---IQFNSE-WLSELGAEGMIR-LAANQTVARMLERDDF 152

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
           + R    Q ++  EF Y +LQ YD V +    +  +++GG+DQ  N++ G +L +     
Sbjct: 153 KKRYAGGQPIAIHEFMYPLLQGYDSVAM----ETDVELGGTDQKFNLLMGRELQKANGQK 208

Query: 220 KLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               L  PLL    G  KM K+ +  I +++   +P   +    +I D  + S+ + L+ 
Sbjct: 209 PQVVLMMPLLVGLDGEKKMSKSANNYIGVSE---APSEMFGKIMSISDDLMWSYYELLSF 265

Query: 279 LPMSEIDRMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM 336
            P+ E+ +       GK   + K ++A EI    H   +A+ A    +  F  +     M
Sbjct: 266 RPLEELAQFKADVAAGKNPRDIKVLLAKEIIARFHSEADADAAEQEFVNRFAKNQIPDEM 325

Query: 337 PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQ 390
           P  + +      G  +  L+ +A   +ST+EA R +K  A K++   + + K +
Sbjct: 326 PEFTFAA-----GTPMANLLKEAELCSSTSEAMRMVKQGAAKMDGEKVEDAKAE 374


>gi|42522726|ref|NP_968106.1| tyrosyl-tRNA synthetase [Bdellovibrio bacteriovorus HD100]
 gi|81617882|sp|Q6MNQ2|SYY_BDEBA RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|39573922|emb|CAE79099.1| tyrS [Bdellovibrio bacteriovorus HD100]
          Length = 405

 Score =  103 bits (258), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 92/358 (25%), Positives = 170/358 (47%), Gaps = 17/358 (4%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D T   +H GH   +  L   Q  GHK   L+G  T++IGDPS ++ +R M+  +EI
Sbjct: 42  LGADPTRPDIHLGHTVVINKLKTFQDLGHKVSFLIGDFTAMIGDPSGKNSTRPMLTREEI 101

Query: 100 QENIEK-IKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
           +EN     K IF         KT+  ++ N +W+  +   + +  + S ++V ++L  E 
Sbjct: 102 EENGRSYAKQIFKIL---DPEKTE--IVYNSSWIMKMTPAEFIT-MTSKYTVAQLLERED 155

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
              R +    +   EF Y + Q YD V L  +    +++GG+DQ  N++ G  +      
Sbjct: 156 FTKRYRSGTPIGIHEFIYPLTQGYDSVALKTD----VELGGTDQKFNLLVGRAMQAAYGM 211

Query: 219 PKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT 277
                LT P+L    G  KM K+L   I +   + +P + +     I D  +  + + LT
Sbjct: 212 EAQCVLTMPILEGIDGVNKMSKSLDNYISV---VDTPKDMFGKTMRISDELMYRWYELLT 268

Query: 278 TLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMP 337
            +  + ++++ +    E  +  + +  E+   +  R  ++  A AA + F+     + +P
Sbjct: 269 DVGAAGLNQL-RADVAEGRKHPRTVKVELAKFLIKRFHSQAEAQAAEDEFNRIFVEKGLP 327

Query: 338 -TISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
             +   + E    MGL  L+VKA  A S +EA R ++   ++I+   +S+ +L+I L+
Sbjct: 328 DEVPDFEVEAETQMGLAALMVKAQLAASNSEAGRLIQGGGVQIDGEKVSDPRLKIDLK 385


>gi|163751948|ref|ZP_02159160.1| tyrosyl-tRNA synthetase [Shewanella benthica KT99]
 gi|161328164|gb|EDP99330.1| tyrosyl-tRNA synthetase [Shewanella benthica KT99]
          Length = 398

 Score =  103 bits (258), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 92/355 (25%), Positives = 166/355 (46%), Gaps = 18/355 (5%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  +   Q+ GH  I L+G  T ++GDPS ++ +R  +  +++
Sbjct: 38  LGADPTAPDIHLGHTVILNKMRTFQELGHDVIFLIGDFTGMVGDPSGKNSTRPPLTREQV 97

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
             N E  K      +     +    ++ N TWL  +    ++R + S  +V RM+  +  
Sbjct: 98  LANAETYKQQVYKILDPAKTR----IVFNSTWLEPLGAAGMIR-LASKQTVARMMERDDF 152

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
           + R    QS++  EF Y +LQ YD V L    +  +++GG+DQ  N++ G +L +     
Sbjct: 153 KKRYASGQSIAIHEFMYPLLQGYDSVAL----EADVELGGTDQKFNLLMGRELQKSEGQK 208

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               +  PLL    G  KM K+ +  I +++        +    +I D  +  + + L+ 
Sbjct: 209 PQTVIMMPLLEGLDGVKKMSKSANNYIGVSEPAG---EMFGKIMSISDVLMWRYFELLSF 265

Query: 279 LPMSEIDRM-AKLQ-GKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM 336
            P++EI++  A ++ G    + K  +A EI    H    A+ A    +  F        +
Sbjct: 266 RPLAEIEQFKADIEAGANPRDIKIALAKEIIARFHDEAAADAAHQEFINRFQKGAIPDDI 325

Query: 337 PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
             + +S   V  G+ +  L+ + GF  ST++A R +K  A KI+   I + +LQ+
Sbjct: 326 EEVELS---VGDGIAIANLLKELGFVKSTSDAMRMIKQGAAKIDGVKIKDTRLQL 377


>gi|260436696|ref|ZP_05790666.1| tyrosyl-tRNA synthetase [Synechococcus sp. WH 8109]
 gi|260414570|gb|EEX07866.1| tyrosyl-tRNA synthetase [Synechococcus sp. WH 8109]
          Length = 400

 Score =  103 bits (258), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 97/382 (25%), Positives = 172/382 (45%), Gaps = 35/382 (9%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D T S++H GH      L   Q  GHK + ++G  T+ IGDP+ +  +R  +  +++
Sbjct: 35  LGIDPTGSNIHLGHSILFRKLRAFQDAGHKAVLIIGDFTARIGDPTGKCATRVQLTKEQV 94

Query: 100 QEN-------IEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNR 152
             N       + + +   ++ + + T     +  N+E WL  +    ++  +G+  +V +
Sbjct: 95  AANASTYLRQLGQDQPKETALLDFETPGRLEVRYNSE-WLEGMDLPAVIGLLGT-GTVGQ 152

Query: 153 MLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL 212
           ML+ +    R      ++  EF Y +LQ +D V  A N D  +++GG+DQ  N+  G DL
Sbjct: 153 MLAKDDFSKRYGSGTPIALHEFLYPLLQGFDSV--AVNAD--VELGGTDQKFNVAMGRDL 208

Query: 213 GERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVS 271
                    F L  P+L    G  KM K+L   + L ++   P + +     + DA +  
Sbjct: 209 QRHFNKGTQFGLLLPILVGLDGVQKMSKSLGNVVGLEED---PLSMYSKLEKVGDAAIDD 265

Query: 272 FAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSI 331
           +   LT L ++ +    +       E +K +A  +T   HG E A+KA + A      S 
Sbjct: 266 YVTLLTDLHLTSLPENPR-------EKQKAMALAVTASRHGIEAAQKAQSDAATLVGGSG 318

Query: 332 HS-QHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQ 390
            +   +P  S++  EV+       L    G   S++EARR +K  A ++    I++    
Sbjct: 319 DAGADVPEASLA--EVNFPAKAFYLFSAVGICASSSEARRQIKGGAARLEGEKITDPN-- 374

Query: 391 IKLQDFDSTGNIK---LSFGKK 409
              Q+F S   ++   L  GKK
Sbjct: 375 ---QEFASAAELEGKVLQLGKK 393


>gi|254468670|ref|ZP_05082076.1| tyrosyl-tRNA synthetase [beta proteobacterium KB13]
 gi|207087480|gb|EDZ64763.1| tyrosyl-tRNA synthetase [beta proteobacterium KB13]
          Length = 389

 Score =  103 bits (258), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 98/357 (27%), Positives = 166/357 (46%), Gaps = 33/357 (9%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   L  L   Q  GH+ I L+G  T +IGDP+ ++ +R  +   +++
Sbjct: 33  GFDPTAPDLHLGHTVLLNKLRQFQNFGHEVIFLIGDFTGMIGDPTGKNTTRPPLTEDQVK 92

Query: 101 ENIEKIKG-IFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           +N +  +  +F    K  T     ++ N+E WL ++    +L+ + + ++V RML  +  
Sbjct: 93  QNAKTYQNQVFKILDKEKT----RVVFNSE-WLKNLGADGMLK-LSAQYTVARMLERDDF 146

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R K  QS+S  EF Y ++Q YD V L    +  +++GG+DQ  N++ G +L +     
Sbjct: 147 SKRFKSNQSISIHEFMYPLMQGYDSVAL----EADVELGGTDQKFNLLMGRELQKAYGQT 202

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               LT PLL    G  KM K+L+  I + +    P   +    +I D  ++ +   L+ 
Sbjct: 203 PQSILTMPLLEGLDGVNKMSKSLNNYIGIEE---PPEVMYAKLLSISDDLMLRYIDLLSL 259

Query: 279 LPMSEIDRMAK-LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMP 337
               EI+   K L+G    E  K I  E +  +  R    +    A + F+    S H P
Sbjct: 260 KNNDEINSWKKRLKG---GENPKNIKDEFSKEIIERFHDHEGYLKAKKDFEQR-SSGHAP 315

Query: 338 TISISKDEVSR-------GMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNE 387
                 DEV          + +  ++    F +ST+EA R +KS  I+++   I  +
Sbjct: 316 ------DEVQEFKMNKQDNLAIPNILKNINFVSSTSEALRLMKSGGIRVDGEKIDKD 366


>gi|78213618|ref|YP_382397.1| tyrosyl-tRNA synthetase [Synechococcus sp. CC9605]
 gi|115305827|sp|Q3AHU0|SYY_SYNSC RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|78198077|gb|ABB35842.1| tyrosyl-tRNA synthetase [Synechococcus sp. CC9605]
          Length = 415

 Score =  103 bits (258), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 97/382 (25%), Positives = 171/382 (44%), Gaps = 35/382 (9%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D T S++H GH      L   Q  GH  + ++G  T+ IGDP+ +  +R  +  +++
Sbjct: 50  LGIDPTGSNIHLGHSILFRKLRAFQDGGHTAVLIIGDFTARIGDPTGKSATRVQLSKEQV 109

Query: 100 QEN-------IEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNR 152
             N       + + +   ++ + + T     +  N+E WL  +    ++  +G+  +V +
Sbjct: 110 AANASTYLRQLGQDQPKETALLDFETPGRLEVRYNSE-WLEGMDLPAVIGLLGT-GTVGQ 167

Query: 153 MLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL 212
           ML+ +    R      ++  EF Y +LQ YD V  A N D  +++GG+DQ  N+  G DL
Sbjct: 168 MLAKDDFSKRYGSGTPIALHEFLYPLLQGYDSV--AVNAD--VELGGTDQKFNVAMGRDL 223

Query: 213 GERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVS 271
                    F L  P+L    G  KM K+L   + L ++   P + +     + DA +  
Sbjct: 224 QRHFNKGTQFGLLLPILVGLDGVQKMSKSLGNVVGLEED---PLSMYSKLEKVGDAAIDD 280

Query: 272 FAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSI 331
           +   LT L ++ +    +       E +K +A  +T   HG E A+KA + A      S 
Sbjct: 281 YVTLLTDLDLASLPDNPR-------EKQKAMALAVTASRHGIEAAQKAQSDAATLVGGSG 333

Query: 332 HS-QHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQ 390
            +   +P  S++  EV+       L    G   S++EARR +K  A ++    I++    
Sbjct: 334 DAGADVPEASLA--EVNFPAKAFYLFSAVGICASSSEARRQIKGGAARLEGEKITDPN-- 389

Query: 391 IKLQDFDSTGNIK---LSFGKK 409
              Q+F S   ++   L  GKK
Sbjct: 390 ---QEFTSAAELEGKVLQLGKK 408


>gi|81448578|sp|Q8DBX3|SYY2_VIBVU RecName: Full=Tyrosyl-tRNA synthetase 2; AltName:
           Full=Tyrosine--tRNA ligase 2; Short=TyrRS 2
          Length = 396

 Score =  103 bits (257), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 89/352 (25%), Positives = 160/352 (45%), Gaps = 20/352 (5%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  L   Q  GH    L+G  T ++GDP+ ++ +R  +  +++
Sbjct: 38  LGADPTAPDIHLGHTVILNKLRAFQDLGHDVTFLIGDFTGMVGDPTGKNSTRPPLTREDV 97

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
             N E  K      +     K   +  N+E WL  +    ++R + +  +V RML  +  
Sbjct: 98  LRNAETYKQQVFKILDPAKTK---IQFNSE-WLSELGAEGMIR-LAANQTVARMLERDDF 152

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
           + R    Q ++  EF Y +LQ YD V +    +  +++GG+DQ  N++ G +L +     
Sbjct: 153 KKRYAGGQPIAIHEFMYPLLQGYDSVAM----ETDVELGGTDQKFNLLMGRELQKANGQK 208

Query: 220 KLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               L  PLL    G  KM K+ +  I +++   +P   +    +I D  + S+ + L+ 
Sbjct: 209 PQVVLMMPLLVGLDGEKKMSKSANNYIGVSE---APSEMFGKIMSISDDLMWSYYELLSF 265

Query: 279 LPMSEIDRMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM 336
            P+ E+ +       GK   + K ++A EI    H   +A+ A    +  F  +     M
Sbjct: 266 RPLEELAQFKADVAAGKNPRDIKVLLAKEIIARFHSEADADAAEQEFVNRFAKNQIPDEM 325

Query: 337 PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEK 388
           P  + +      G  +  L+ +A   +ST+EA R +K  A K++   + + K
Sbjct: 326 PEFTFAA-----GTPMANLLKEAELCSSTSEAMRMVKQGAAKMDGEKVEDAK 372


>gi|325955545|ref|YP_004239205.1| Tyrosyl-tRNA synthetase [Weeksella virosa DSM 16922]
 gi|323438163|gb|ADX68627.1| Tyrosyl-tRNA synthetase [Weeksella virosa DSM 16922]
          Length = 401

 Score =  103 bits (257), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 97/384 (25%), Positives = 166/384 (43%), Gaps = 23/384 (5%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
            K +   IL E G   ++   +E         +   +G+D TA  LH GH   L  L   
Sbjct: 5   LKENVEIILPENGLEQKLKQAKE-----ENRKLIIKLGFDPTAPDLHLGHAVVLKKLKQF 59

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q  GH+ + L+G  T+ IGDP+ ++++R+ + ++E+Q N +      S  I     K   
Sbjct: 60  QDLGHQVVILVGSFTARIGDPTGKNKARKPLSAEEVQHNAQTYINQLSKIIDVEKTK--- 116

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            ++ N TWL  + +  ++ E+ S  +V +++       R      ++  E  Y ILQ YD
Sbjct: 117 -IVYNSTWLDGLSFSAII-ELLSRVTVAQLMHRNDFNKRFTENTPIAMHELVYPILQGYD 174

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLS 242
             ++  +    ++MGG+DQ  N   G  L E  +      +  PLL    G  KM K+++
Sbjct: 175 STQIKAD----IEMGGTDQLFNCTMGRQLQESYEVSPQIVMCMPLLRGLDGKEKMSKSMN 230

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKK 300
             I L  E   P   +    +I D  +  +    T   + E +++      G    + KK
Sbjct: 231 NIIGLTDE---PNEMFGKTMSIPDDLLEEYINLATDFSIEEKEQLKNRIASGDNPMKIKK 287

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM--PT-ISISKDEVSRGMGLLTLIV 357
           I+A  I T  H  E AE A       F      + +  P  I+  ++  +  M LL L  
Sbjct: 288 IVAKNIITQYHNAEAAEGAEVFFSTQFQNKNFDEKVFEPVKINTLQNIENNRMSLLDLCH 347

Query: 358 KAGFATSTNEARRHLKSNAIKINN 381
           +    +S +  RR ++   I+I+N
Sbjct: 348 QLKKDSSRSAVRRLIEGGGIQIDN 371


>gi|78779811|ref|YP_397923.1| tyrosyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9312]
 gi|115305814|sp|Q319F8|SYY_PROM9 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|78713310|gb|ABB50487.1| tyrosyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9312]
          Length = 412

 Score =  103 bits (257), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 98/382 (25%), Positives = 180/382 (47%), Gaps = 34/382 (8%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D T + +H GH      L   Q  GH  + ++G  T+ IGDP+ ++++R  +  +++
Sbjct: 46  LGIDPTGTDIHLGHSILFKKLRAFQDNGHIAVLIIGDFTAQIGDPTGKNKTRVQLSEKQV 105

Query: 100 QENIEKI-------KGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNR 152
           ++N +         K    S + + +     +  N+E WL  +    ++  +GS  +V++
Sbjct: 106 KDNAKTYLTQLGMGKPANESILDFDSKDKIEIRYNSE-WLKGLNLNSIIELMGS-ATVSQ 163

Query: 153 MLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL 212
           ML+ E    R   +  ++  EF Y +LQ YD V +  +    +++GG+DQ  NI  G DL
Sbjct: 164 MLAKEEFNKRYNSQVPIALHEFLYPLLQGYDSVVVQSD----IELGGTDQKFNIAIGRDL 219

Query: 213 GERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVS 271
               K    F +  P+LT   G  KM K+    + L ++  S Y+  +    + D  + +
Sbjct: 220 QRHFKQEPQFGVLLPILTGLDGIKKMSKSEFNTVGLTEDSLSMYSKLE---KVPDNIIPT 276

Query: 272 FAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSI 331
           + + LT L +S       L      E ++ +A E+TT+ HG EEA KA +   + F    
Sbjct: 277 YFELLTELDLS------VLNDANPRELQRRMALEVTTLFHGAEEASKAQSNCEKLF--LG 328

Query: 332 HSQHMPTI-SISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQ 390
           H + +  I  IS  ++   +    L+       S++E++R +K   +KI++  + N  + 
Sbjct: 329 HKEKVGEIPEISLKDIVFPVKFFYLLSSLKLFKSSSESKRSIKGGGVKIDSQKVINPDIV 388

Query: 391 IKLQDFDSTGNIK---LSFGKK 409
                FDS  +++   L  GKK
Sbjct: 389 -----FDSKKDLEGKILQIGKK 405


>gi|325919686|ref|ZP_08181688.1| tyrosyl-tRNA synthetase [Xanthomonas gardneri ATCC 19865]
 gi|325549794|gb|EGD20646.1| tyrosyl-tRNA synthetase [Xanthomonas gardneri ATCC 19865]
          Length = 403

 Score =  103 bits (256), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 103/388 (26%), Positives = 172/388 (44%), Gaps = 34/388 (8%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   L  +   Q+ GH+ I L+G  T +IGDPS ++ +R+ +   ++ 
Sbjct: 39  GFDPTAPDLHLGHTVLLNKMRQFQQLGHQVIFLIGDFTGMIGDPSGKNVTRKPLSRDDVL 98

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
            N    +       K    +   +  N+E W   +   D+++ + +  +V RML  +   
Sbjct: 99  ANARTYE---EQVFKILDRERTEVRFNSE-WFGQMSAADMIK-LSAQHTVARMLERDDFA 153

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R   +Q ++  EF Y ++Q YD V L  +    +++GG+DQ  N++ G  L E      
Sbjct: 154 KRFSGQQPIAIHEFLYPLVQGYDSVALKAD----VELGGTDQKFNLLMGRGLQEHYGQAP 209

Query: 221 LFALTSPLLTTASGT-KMGKTLSGAIWLNKEM------TSPYNFWQYWRNIDDADVVSFA 273
              LT PLL    G  KM K+L   I +N+        T        WR I   D++SF 
Sbjct: 210 QVVLTMPLLEGLDGVAKMSKSLGNYIGINEPAIDIVTKTMKIGDELTWRWI---DLLSF- 265

Query: 274 KRLTTLPMSEIDRM-AKLQGKEIN--EAKKIIATEITTMVHGREEAEKAATAAMECFDMS 330
                + ++E  R+  ++   E++  E K  +A E+TT  H    AE+A           
Sbjct: 266 ----DISVAEAARLKEQVASGELHPREVKLRLARELTTRFHDAAAAEQAIAGWHAVVTGQ 321

Query: 331 IHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQ 390
             +  +P   +     + G+ + +L+  AG   S +EA R LK  A+KI+  ++ +   Q
Sbjct: 322 GDTSLLPLQEVVVP--AEGLRIASLLTAAGLTPSNSEATRKLKERAVKIDGEVVEDLARQ 379

Query: 391 IKLQDFDSTGNIKLSFGKKNHIICHLCG 418
                F       +  GK+N     L G
Sbjct: 380 -----FGPGFEGVIQVGKRNFARVALVG 402


>gi|282901396|ref|ZP_06309321.1| Tyrosyl-tRNA synthetase, class Ib [Cylindrospermopsis raciborskii
           CS-505]
 gi|281193675|gb|EFA68647.1| Tyrosyl-tRNA synthetase, class Ib [Cylindrospermopsis raciborskii
           CS-505]
          Length = 398

 Score =  103 bits (256), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 93/375 (24%), Positives = 173/375 (46%), Gaps = 26/375 (6%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D T + +H GH   +  L   Q  GH  + ++G  T+ IGDP+ + + RR +  +++
Sbjct: 44  LGIDPTGADIHLGHSIPVRKLRAFQDAGHTAVLIIGDFTARIGDPTGKSDVRRQLTEEDV 103

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
            +N +         + + T     +  N++ WL  +    +L E+ S  +V +ML+ E  
Sbjct: 104 SQNAQTYLEQVRPILDFDTPGRLEVHYNSQ-WLSGLDLAKIL-ELLSTMTVGQMLAKEGF 161

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R K+E  +   EF Y ++Q +D V +  +    +++GG+DQ  NI  G DL       
Sbjct: 162 AERYKKENPIFLHEFLYPLMQGFDSVAIKSD----VELGGTDQKFNIAVGRDLQRHFGLR 217

Query: 220 KLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
             F L  P+L    G  KM K+L   + L++    P   +Q  + + D  +  + + LT 
Sbjct: 218 PQFGLLLPILIGTDGIQKMSKSLGNYVGLSEH---PSQKYQKLQGVPDHLLTQYFELLTD 274

Query: 279 LPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPT 338
           LP+  +    +       + ++ +A EI    HG  +A +A  AA       +    +P 
Sbjct: 275 LPLDTLPDNPR-------DRQQFLAWEIVRQYHGEIQANQAQEAAKSKGKEGV----LPE 323

Query: 339 ISISKDEVSRGMGLLTLIVKA-GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
            S++   +++    L  I+ A G   ST E +R ++   +++++  I++  L       D
Sbjct: 324 FSLAN--ITQFPAKLAHILSASGLCKSTGEGKRKIQEGGVRLDSEKITDVDLTF-FGPGD 380

Query: 398 STGNIKLSFGKKNHI 412
            +G + L  GKKN +
Sbjct: 381 LSGKV-LQVGKKNFV 394


>gi|319941829|ref|ZP_08016151.1| tyrosyl-tRNA synthetase [Sutterella wadsworthensis 3_1_45B]
 gi|319804762|gb|EFW01629.1| tyrosyl-tRNA synthetase [Sutterella wadsworthensis 3_1_45B]
          Length = 421

 Score =  103 bits (256), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 95/357 (26%), Positives = 167/357 (46%), Gaps = 19/357 (5%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  L  LQ  GH  I L+G  T+ IGDPS R+ +R  +  ++I
Sbjct: 59  LGLDPTAPDIHIGHTVVLNKLRQLQDLGHTVIFLVGDFTAAIGDPSGRNTTRPPLTREQI 118

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           + N +    +  + +     KT+     N  W  ++    L+ ++ S +++ R+L  +  
Sbjct: 119 EANAQTY--LNQAGMVLDLDKTEVRY--NSEWSNALGATGLI-QLASRYTLARLLERDDF 173

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R K E  ++  E  Y ++Q YD V L  +    L++GGSDQ  N++ G +L  +    
Sbjct: 174 AKRFKEELPIAMHELLYPLMQGYDSVALKAD----LELGGSDQRFNLLVGRELQRQYGQE 229

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYN-FWQYWRNIDDADVVSFAKRLT 277
               LT PLL    G  KM K+    I +    T P N  +    +I D  + ++   L+
Sbjct: 230 PQCILTMPLLVGLDGVQKMSKSKKNYIGI----TDPANDMFGKVMSITDDLMWNWYDLLS 285

Query: 278 TLPMSEIDRMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQH 335
               +EI ++ K   +G+   +AK ++A EI    H +  A+ A       F        
Sbjct: 286 LRSNAEIAQLKKECAEGRNPRDAKVLLAREIIERFHDKAAADAAEAEFNARFQKGAVPND 345

Query: 336 MPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
           +  ++++    +  +G++ LI  AG A S  EA R++    ++I+   + +  L+I+
Sbjct: 346 IKDVTVAAP--TGEIGIMQLIKVAGLAPSNAEAGRNIDQGGVRIDGESVRDRTLKIQ 400


>gi|152999747|ref|YP_001365428.1| tyrosyl-tRNA synthetase [Shewanella baltica OS185]
 gi|151364365|gb|ABS07365.1| tyrosyl-tRNA synthetase [Shewanella baltica OS185]
          Length = 397

 Score =  103 bits (256), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 92/358 (25%), Positives = 166/358 (46%), Gaps = 25/358 (6%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  L   Q+ GH+ I L+G  T ++GDPS ++ +R  +  +++
Sbjct: 38  LGADPTAPDIHLGHTVILNKLRLFQELGHEVIFLIGDFTGMVGDPSGKNSTRPPLTREQV 97

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
             N E  K      +     + +     N +WL  +    ++R + S  +V RM+  +  
Sbjct: 98  LANAETYKEQVYKILDPVKTRIEF----NSSWLEPLGAAGMIR-LASKQTVARMMERDDF 152

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
           + R    QS++  EF Y +LQ YD V L  +    +++GG+DQ  N++ G +L +     
Sbjct: 153 KKRYASGQSIAIHEFMYPLLQGYDSVALQAD----VELGGTDQKFNLLMGRELQKAEGQK 208

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYN-FWQYWRNIDDADVVSFAKRLT 277
               +  PLL    G  KM K+    I +    + P N  +    +I D  +  + + L+
Sbjct: 209 PQAVIMMPLLEGLDGVKKMSKSAHNYIGV----SEPANEMFGKLMSISDDLMWRYFELLS 264

Query: 278 TLPMSEIDRMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQH 335
             P++EI++  +    G    + K  +A EI T  H    AE A  A ++       ++ 
Sbjct: 265 FRPLAEIEQFKQDVANGSNPRDIKIALAKEIITRFHDEASAESAHQAFVD------RAKG 318

Query: 336 MPTISISKDEV--SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
           M    I + E+    G+ +  L+  A    ST+EA R +K  A+K++   + + ++ +
Sbjct: 319 MIPDDIEEIELVAGEGIAIANLLKDADLVASTSEAMRMIKQGAVKMDGEKLDDSRMTL 376


>gi|311030916|ref|ZP_07709006.1| tyrosyl-tRNA synthetase 2 [Bacillus sp. m3-13]
          Length = 404

 Score =  102 bits (255), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 97/386 (25%), Positives = 175/386 (45%), Gaps = 25/386 (6%)

Query: 32  SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESR 91
           S+  +T  +G D +A  +H GH   L  +  +Q  GHK + ++G  T  IGDP+ + + R
Sbjct: 35  SKTPLTVKLGLDPSAPDIHLGHAVVLRKMKQMQDLGHKIVIIIGDFTGRIGDPTGKAKGR 94

Query: 92  RMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVN 151
           + +  ++++ N +          K    +   +  N+E WL  + + ++++ + +  SV 
Sbjct: 95  KALSDEQVKLNAQT---YCEQIFKVLDAEKTTVRFNSE-WLFKLTFEEVIK-LAATTSVA 149

Query: 152 RMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGID 211
           R+L  +  + R   +  +   EF Y ++QAYD VE+  +    +++GG+DQ  NI+ G  
Sbjct: 150 RILERDDFQKRYNSQVPIGIHEFFYPLMQAYDSVEIQAD----IELGGTDQTFNILMGRT 205

Query: 212 LGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVV 270
           L ++    K  A+  PLL    G  KM K+L   I +N+   +    ++    + D  ++
Sbjct: 206 LQKQWGLEKQVAIFMPLLEGLDGVEKMSKSLGNYIGVNE---AAEVMFKKVMEVPDELII 262

Query: 271 SFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFD 328
            + +  T     +I    +   QG    + K  +A  IT +  G EE ++A T     F 
Sbjct: 263 KYFELATDEHPDDIHNFVQQLEQGANPRDFKLELAIIITNLYCGEEETKRAITFYETAFS 322

Query: 329 MSIHSQHMPT--ISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISN 386
                  +P   I I  + V   + ++  +V  G   S +E  R +K N +++N      
Sbjct: 323 KKEIPDDIPELLIEIGAETV---LAIIPQLVDKGLVKSKSEFMRLIKQNGVQLN-----K 374

Query: 387 EKLQIKLQDFDSTGNIKLSFGKKNHI 412
           EKL I   D     +  L  GKK  I
Sbjct: 375 EKLSIDELDRVLMNDEVLRIGKKRFI 400


>gi|288918516|ref|ZP_06412866.1| tyrosyl-tRNA synthetase [Frankia sp. EUN1f]
 gi|288350035|gb|EFC84262.1| tyrosyl-tRNA synthetase [Frankia sp. EUN1f]
          Length = 408

 Score =  102 bits (255), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 99/365 (27%), Positives = 171/365 (46%), Gaps = 27/365 (7%)

Query: 29  ILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRD 88
           +L  + ++  Y G DLTA  LH GH   L +   LQ  GH+ + L+G  T+ IGDP+ + 
Sbjct: 34  LLSGRQLIMKY-GVDLTAPHLHIGHAVNLWMYRALQDLGHRVVLLLGDFTTQIGDPTGKS 92

Query: 89  ESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN---NETWLCSIKYIDLLREIG 145
           ++R ++  +EI+ N ++I+   +  +     +TD  +L    N  WL ++   +LL  + 
Sbjct: 93  KTRPVLAREEIEANAKQIQEQATRVL-----RTDPELLEIRPNSEWLNAMTPSELL-TVM 146

Query: 146 SFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGN 205
           S  +V+R+LS +  R R+   QS++  E  Y I+Q +D V L  +    L + GSDQ  N
Sbjct: 147 SRVTVDRLLSRDMFRKRMSEGQSIAAHELVYPIIQGWDSVCLRAD----LTIIGSDQLFN 202

Query: 206 IICGIDLGERL-KTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNI 264
            + G  L E+  + P++   T        G K  K+L   + +N    SP   +     +
Sbjct: 203 EMMGRSLQEKEGQAPQVVITTKITPGIDGGEKQSKSLGNYVAINH---SPREKFGRLMRV 259

Query: 265 DDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAM 324
            D  V  +    + LP   I  +   Q     EAK  +AT I T    R + E AA A  
Sbjct: 260 PDQYVGQYLTVYSDLPEDAIRAVLSKQETAPIEAKYDMATAIVT----RWDGEAAAAAER 315

Query: 325 ECFDMSIHSQHMPTIS--ISKDEVS-RGMGLLTLIVKAGFATSTNEARRHLKSNAIKINN 381
           + F  +   + +P  +  +  D  S + + L+  ++ AG   S  + RR ++   + + +
Sbjct: 316 DWFITTFSRRQVPADAEHVVLDTASMKVLDLMRTLLGAG--PSNGDLRRLIQQGGVTVGD 373

Query: 382 SIISN 386
             I +
Sbjct: 374 DRIDD 378


>gi|294139677|ref|YP_003555655.1| tyrosyl-tRNA synthetase [Shewanella violacea DSS12]
 gi|293326146|dbj|BAJ00877.1| tyrosyl-tRNA synthetase [Shewanella violacea DSS12]
          Length = 398

 Score =  102 bits (255), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 93/355 (26%), Positives = 165/355 (46%), Gaps = 18/355 (5%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  +   Q+ GH+ I L+G  T ++GDPS ++ +R  +  +++
Sbjct: 38  LGADPTAPDIHLGHTVILNKMRTFQELGHEVIFLIGDFTGMVGDPSGKNSTRPPLTREQV 97

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
             N E  K      +     + +     N TWL  +    ++R + S  +V RM+  +  
Sbjct: 98  LANAETYKEQVYKILDPAKTRIEF----NSTWLEPLGAAGMIR-LASKQTVARMMERDDF 152

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
           + R    QS++  EF Y +LQ YD V L    +  +++GG+DQ  N++ G +L +     
Sbjct: 153 KKRYTSGQSIAIHEFMYPLLQGYDSVAL----EADVELGGTDQKFNLLMGRELQKSEGQK 208

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               +  PLL    G  KM K+    I +++        +    +I D  +  + + L+ 
Sbjct: 209 PQTVIMMPLLEGLDGVKKMSKSAHNYIGVSEPAG---EMFGKIMSISDVLMWRYFELLSF 265

Query: 279 LPMSEIDRM-AKLQ-GKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM 336
            P+ EI++  A ++ G    + K  +A EI T  H    AE A    +  F        +
Sbjct: 266 RPLGEIEQFKADIEAGANPRDIKIALAKEIITRFHDEAAAEAAHQEFINRFQKGAIPDDI 325

Query: 337 PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
             + ++   V  G+ +  L+ + GF  ST++A R +K  A KI+   I + +LQ+
Sbjct: 326 EEVELN---VGDGIAIANLLKELGFVKSTSDAMRMIKQGAAKIDGVKIEDTRLQL 377


>gi|24372893|ref|NP_716935.1| tyrosyl-tRNA synthetase [Shewanella oneidensis MR-1]
 gi|81462720|sp|Q8EHB3|SYY_SHEON RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|24347014|gb|AAN54380.1|AE015575_6 tyrosyl-tRNA synthetase [Shewanella oneidensis MR-1]
          Length = 398

 Score =  102 bits (255), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 91/356 (25%), Positives = 165/356 (46%), Gaps = 20/356 (5%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  L   Q+ GH+ I L+G  T ++GDPS ++ +R  +  +++
Sbjct: 38  LGADPTAPDIHLGHTVILNKLRLFQELGHEVIFLIGDFTGMVGDPSGKNSTRPPLTREQV 97

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
             N E  K      +     + +     N +WL  +    ++R + S  +V RM+  +  
Sbjct: 98  LANAETYKEQVYKILDPAKTRIEF----NSSWLEPLGAAGMIR-LASQQTVARMMERDDF 152

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
           + R    QS++  EF Y +LQ YD V L  +    +++GG+DQ  N++ G +L +     
Sbjct: 153 KKRYASGQSIAIHEFMYPLLQGYDSVALKAD----VELGGTDQKFNLLMGRELQKAEGQK 208

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYN-FWQYWRNIDDADVVSFAKRLT 277
               +  PLL    G  KM K+    I +    + P N  +    +I D  +  + + L+
Sbjct: 209 PQAVIMMPLLEGLDGVKKMSKSAHNYIGV----SEPANEMFGKIMSISDELMWRYFELLS 264

Query: 278 TLPMSEIDRMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQH 335
             P++EI++  +    G    + K  +A EI    H    AE A  A ++ F        
Sbjct: 265 FRPLAEIEQFKQDIANGANPRDTKISLAKEIIARFHDAAAAESAHQAFIDRFQKGAIPDD 324

Query: 336 MPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
           +P + ++  E   G+ +  L+  A    ST++A R +K  A+K++   I + ++ +
Sbjct: 325 IPEVELAAGE---GLAIANLLKDADLVGSTSDALRMIKQGAVKMDGEKIDDSRMTL 377


>gi|304409332|ref|ZP_07390952.1| tyrosyl-tRNA synthetase [Shewanella baltica OS183]
 gi|307303690|ref|ZP_07583443.1| tyrosyl-tRNA synthetase [Shewanella baltica BA175]
 gi|304351850|gb|EFM16248.1| tyrosyl-tRNA synthetase [Shewanella baltica OS183]
 gi|306912588|gb|EFN43011.1| tyrosyl-tRNA synthetase [Shewanella baltica BA175]
          Length = 397

 Score =  102 bits (255), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 93/358 (25%), Positives = 166/358 (46%), Gaps = 25/358 (6%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  L   Q+ GH+ I L+G  T ++GDPS ++ +R  +  +++
Sbjct: 38  LGADPTAPDIHLGHTVILNKLRLFQELGHEVIFLIGDFTGMVGDPSGKNSTRPPLTREQV 97

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
             N E  K      +     + +     N +WL  +    ++R + S  +V RM+  +  
Sbjct: 98  LANAETYKEQVYKILDPVKTRIEF----NSSWLEPLGAAGMIR-LASKQTVARMMERDDF 152

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
           + R    QS++  EF Y +LQ YD V L  +    +++GG+DQ  N++ G +L +     
Sbjct: 153 KKRYASGQSIAIHEFMYPLLQGYDSVALQAD----VELGGTDQKFNLLMGRELQKAEGQK 208

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYN-FWQYWRNIDDADVVSFAKRLT 277
               +  PLL    G  KM K+    I +    + P N  +    +I D  +  + + L+
Sbjct: 209 PQAVIMMPLLEGLDGVKKMSKSAHNYIGV----SEPANEMFGKLMSISDDLMWRYFELLS 264

Query: 278 TLPMSEIDRMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQH 335
             P++EI++  +    G    + K  +A EI T  H    A+ A  A ++       ++ 
Sbjct: 265 FRPLAEIEQFKQDVANGSNPRDIKIALAKEIITRFHDEASAQSAHQAFVD------RAKG 318

Query: 336 MPTISISKDEVSRGMGL--LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
           M    I + E+  G GL    L+  A    ST+EA R +K  A+K++   + + ++ +
Sbjct: 319 MIPDDIGEIELVAGEGLAIANLLKDADLVASTSEAMRMIKQGAVKMDGEKLDDSRMTL 376


>gi|327350732|gb|EGE79589.1| hypothetical protein BDDG_02530 [Ajellomyces dermatitidis ATCC
           18188]
          Length = 355

 Score =  102 bits (255), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 77/277 (27%), Positives = 130/277 (46%), Gaps = 42/277 (15%)

Query: 158 SVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL- 216
           SV++RL+  + ++  EF Y +LQA+D+ +L +  +  +Q+GGSDQ GNI  G+D  + L 
Sbjct: 4   SVKNRLQSGKGMALSEFVYPLLQAWDWWQLIQQQNILVQVGGSDQAGNIQFGMDATKPLM 63

Query: 217 -----------------KTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQ 259
                            K  +    T+PLLTTASG K GK+   A+WL+++MTS ++ +Q
Sbjct: 64  KANDEYWRKHAPRDEDRKLLEPMGFTTPLLTTASGQKFGKSAGNAVWLDQDMTSSFDLYQ 123

Query: 260 YWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATEITTMVHGREEAE 317
           ++  + D +V  + K  T LP+  I  + +  +Q      A+  +A+E   ++ G  EA 
Sbjct: 124 FFLRVTDENVEQYLKYFTFLPIPAIKELMEQHMQDPSKRIAQHKLASEFVELIRGPAEAA 183

Query: 318 KAATAAMECF---------------------DMSIHSQHMPTISISKDEVSRGMGLLTLI 356
           +A       F                     + S  +   P I++ +  V  G     ++
Sbjct: 184 QAEKDHRSIFGGKTPTSDELTPRPKRDINLSETSPFNAPSPHITLPRSLVV-GQFFHKVL 242

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL 393
             AG A S  EA R + +N   + +   SN  +  KL
Sbjct: 243 WSAGMAPSKAEAFRLVVNNGAAVASRSDSNAIMDDKL 279


>gi|75907148|ref|YP_321444.1| tyrosyl-tRNA synthetase [Anabaena variabilis ATCC 29413]
 gi|115305796|sp|Q3MEN7|SYY_ANAVT RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|75700873|gb|ABA20549.1| tyrosyl-tRNA synthetase [Anabaena variabilis ATCC 29413]
          Length = 398

 Score =  102 bits (255), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 83/355 (23%), Positives = 158/355 (44%), Gaps = 38/355 (10%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G D T + +H GH   +  L   Q  GH  + ++G  T+ IGDP+ + E RR +  ++++
Sbjct: 45  GIDPTGADIHLGHSIPMRKLRGFQDAGHTAVLIIGDFTARIGDPTGKSEMRRQLTEEDVK 104

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           +N +         + + T     +  N+E WL  +  +  + E+ +  +V +ML+ E   
Sbjct: 105 QNAQTYLDQVRPILDFDTPGRLEVRYNSE-WLSRLD-LGKITELLATMTVGQMLAKEGFA 162

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R K+E  +   EF Y ++Q YD V +    +  +++GG+DQ  NI  G DL        
Sbjct: 163 DRYKKENPIFLHEFLYPLMQGYDSVAI----EADVELGGTDQKFNIAVGRDLQRHFGQKP 218

Query: 221 LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTL 279
            F +  P+L    G  KM K+L   + L++    P   +Q  + + D  +  + + LT L
Sbjct: 219 QFGVLLPILIGTDGVQKMSKSLGNYVSLSEH---PGQKYQKLQGVPDQMLEQYFELLTDL 275

Query: 280 PMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEK--------AATAAMECFDMSI 331
           P+ ++    +       + + ++A EI    HG + A++            A+  F ++ 
Sbjct: 276 PIDKLPANPR-------DRQMLLAWEIVKQYHGEQAAQEAKEAAQSGGKEGAVPEFSLA- 327

Query: 332 HSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISN 386
               +P   +          L  L+   G   ST E +R ++   ++++   IS+
Sbjct: 328 ---GVPQFPVK---------LAYLLGATGLCKSTGEGKRKIQEGGVRLDGDRISD 370


>gi|293611371|ref|ZP_06693667.1| tyrosyl-tRNA synthetase [Acinetobacter sp. SH024]
 gi|292826243|gb|EFF84612.1| tyrosyl-tRNA synthetase [Acinetobacter sp. SH024]
          Length = 404

 Score =  102 bits (255), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 94/375 (25%), Positives = 164/375 (43%), Gaps = 28/375 (7%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           I+SE   + ++   R L I           G+D TA  LH GH   +  L   Q  GH+ 
Sbjct: 21  IISEEDLLKKLKENRPLKIKA---------GFDPTAPDLHLGHTVLINKLKTFQDLGHEV 71

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
             L+G  T++IGDP+ +  +R  +  ++++ N +  +     F      KT      N  
Sbjct: 72  TFLIGDYTAMIGDPTGKSATRPPLSREQVEANAKTYQE--QVFKILDPNKTKVRF--NSE 127

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           W       DL+ ++ S  +V+RML  +    R    Q ++  EF Y ++Q YD + L   
Sbjct: 128 WFNQKSAADLI-QLASQQTVSRMLERDDFTKRYSNHQPIAIHEFLYPLVQGYDSIAL--- 183

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNK 249
            +  +++GG+DQ  N++ G  L  R        +T P+L    G  KM K+L   I +  
Sbjct: 184 -EADVELGGTDQTFNLLMGRTLQSRYGQESQVCITVPILEGLDGVNKMSKSLGNYIGV-- 240

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI----DRMAKLQGKEINEAKKIIATE 305
              +P   +Q   ++ D+ +  +   L+   + EI    D +A   G+   E K+I+A E
Sbjct: 241 -FDTPGAMYQKVLSMPDSLIERYFDLLSFKSLDEIKALLDEIAA--GRNPQEVKRILALE 297

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           +    H  E A  A  +A          +  P ++IS  E    + + T++  AG   + 
Sbjct: 298 LVERFHDAEAAANAHKSAGNRITEGEVPEDTPEVTISLGEFGGEIFIATILRVAGLNPNA 357

Query: 366 NEARRHLKSNAIKIN 380
             A+  +   A+K++
Sbjct: 358 AAAKDAVARGAVKVD 372


>gi|307330737|ref|ZP_07609874.1| tyrosyl-tRNA synthetase [Streptomyces violaceusniger Tu 4113]
 gi|306883629|gb|EFN14678.1| tyrosyl-tRNA synthetase [Streptomyces violaceusniger Tu 4113]
          Length = 472

 Score =  102 bits (255), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 92/357 (25%), Positives = 160/357 (44%), Gaps = 41/357 (11%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA+ +H GH+  +++L   Q+ GH    L+G  T+ IGDPS R   R  +  ++I
Sbjct: 84  LGIDPTAADVHLGHVVPMIILSRFQRMGHDVTLLIGDFTAKIGDPSGRTAERPPLTDEDI 143

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
             N+   +     F  +           N  WL    + +LL  + S   V+++L  E  
Sbjct: 144 ARNLAGYQDQVRPFFDF----EKVSFRQNSEWLAPYTFPELLGLL-SQVPVSQLLQREDF 198

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE-RLKT 218
           R+RL     L+  E  Y I QA D V L    +C +++GG+DQ  N+  G  L E R + 
Sbjct: 199 RNRLAAGSGLTMSELLYPIAQALDSVAL----ECDVELGGADQLLNLQMGRKLMELRGQR 254

Query: 219 PKLFALTSPLL--TTASGTKMGKTLSGAIWLN--------KEMTSP----YNFWQYWRNI 264
           P+L  +T PL+  T  +G KM K+    + L+        K M+ P      + + W   
Sbjct: 255 PQLV-VTMPLIEGTDGTGAKMSKSKGNYVALSATADDVFGKIMSIPDRLMKPYLEAWTEW 313

Query: 265 DDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAM 324
            DA++ +   R+    +  +D             KK++A E+   ++G E+A  A    +
Sbjct: 314 TDAEIAAATARVEDRSLHPMD------------LKKVLAGEVVAALYGIEKAMAARAGFV 361

Query: 325 ECFDMSIHS--QHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKI 379
             F     +  + +P +   +        +L+ +++  F  S + ARR  K N +++
Sbjct: 362 AQFSKKSFTDVETLPVVDAGEHGAESIATVLSKVLE--FQPSASAARRVAKQNGLRL 416


>gi|84394556|ref|ZP_00993262.1| tyrosyl-tRNA synthetase [Vibrio splendidus 12B01]
 gi|86148140|ref|ZP_01066439.1| tyrosyl-tRNA synthetase [Vibrio sp. MED222]
 gi|218710458|ref|YP_002418079.1| tyrosyl-tRNA synthetase [Vibrio splendidus LGP32]
 gi|84374825|gb|EAP91766.1| tyrosyl-tRNA synthetase [Vibrio splendidus 12B01]
 gi|85834057|gb|EAQ52216.1| tyrosyl-tRNA synthetase [Vibrio sp. MED222]
 gi|218323477|emb|CAV19654.1| tyrosyl-tRNA synthetase [Vibrio splendidus LGP32]
          Length = 395

 Score =  102 bits (255), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 95/353 (26%), Positives = 165/353 (46%), Gaps = 20/353 (5%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH      L   Q+ GH+   L+G  T+++GDPS ++ +R  +  +++
Sbjct: 38  LGADPTAPDIHLGHTVIFNKLRAFQELGHEVTFLIGDFTAMVGDPSGKNSTRPPLSREDV 97

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
            +N E  K     F      KT  +  N+E WL  +    ++R + S  +V RML  +  
Sbjct: 98  LKNAETYKE--QVFKILDPAKTQ-IRFNSE-WLSELGAEGMIR-LASNQTVARMLERDDF 152

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
           + R    Q ++  EF Y +LQ +D V L    +  +++GG+DQ  N++ G +L +     
Sbjct: 153 KKRYAGGQPIAIHEFMYPLLQGHDSVAL----ESDVELGGTDQKFNLLMGRELQKAAGQK 208

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               L  PLL    G  KM K+    I +++   +P   +    +I D  + S+ + L+ 
Sbjct: 209 PQAVLMMPLLVGLDGVKKMSKSAHNYIGISE---APSEMFGKIMSISDDLMWSYYELLSF 265

Query: 279 LPMSEIDRM-AKLQ-GKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM 336
            P+ E+  + A ++ GK   + K ++A EI    H   +AE A    +  F  +     M
Sbjct: 266 RPLEEVAELKAGVEAGKNPRDVKVLLAKEIIARFHSEADAEAAEQEFVNRFAKNQVPDEM 325

Query: 337 PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKL 389
           P       E   G+ +  ++ +AG   ST++A R +K  A K+    I + K 
Sbjct: 326 PEF-----EFEAGLPIANVLKEAGLVNSTSDAMRMIKQGAAKLEGEKIEDSKF 373


>gi|92115165|ref|YP_575093.1| tyrosyl-tRNA synthetase [Chromohalobacter salexigens DSM 3043]
 gi|91798255|gb|ABE60394.1| tyrosyl-tRNA synthetase [Chromohalobacter salexigens DSM 3043]
          Length = 398

 Score =  102 bits (255), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 87/382 (22%), Positives = 173/382 (45%), Gaps = 26/382 (6%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           IL E   + ++ + R+L I           G+D TA  LH GH   L  +   Q+ GH+ 
Sbjct: 18  ILLEDELVKKLESGRKLRIKA---------GFDPTAPDLHLGHSVLLTKMRQFQELGHQV 68

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           + L+G  T  IGDP+ ++ +R+ +   E++ N E  K       K        +  N E 
Sbjct: 69  VFLIGDFTGRIGDPTGKNVTRKPLTEAEVKANAETYK---EQVFKILDPALTEVRFNAE- 124

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           W+  +   D++ E+ +  +V RML  +    R    QS+S  EF Y ++Q YD V L   
Sbjct: 125 WMSKLSAADMI-ELAAQSTVARMLERDDFEKRYTANQSISIHEFLYPLVQGYDSVAL--- 180

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNK 249
            +  +++GG+DQ  N++ G ++ +         +T PLL    G  KM K+L   + ++ 
Sbjct: 181 -EADIELGGTDQKFNLLMGREIQKHFGQAPQVVMTMPLLEGLDGVQKMSKSLGNYVGVD- 238

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIATEIT 307
              +P   +    ++ D+ +  + + L+     EI+++ +    G    + K  +A E+ 
Sbjct: 239 --DTPGVMFNKLVSMPDSLMWRYFELLSLKSNDEIEKIRRSIESGANPRDIKMELARELI 296

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
              HG E A  A  +A            +P + ++ +       +  ++ ++G   ++ +
Sbjct: 297 ARYHGEEAAANAHKSAGNQLAEGELPDDLPDVEVAFE--GEQAPIAAVLNRSGLTNNSAQ 354

Query: 368 ARRHLKSNAIKINNSIISNEKL 389
           A+  L +  +K++  +++ + +
Sbjct: 355 AKDMLSNGRVKVDGEVVAKDAM 376


>gi|325123508|gb|ADY83031.1| tyrosyl-tRNA synthetase [Acinetobacter calcoaceticus PHEA-2]
          Length = 410

 Score =  102 bits (255), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 94/375 (25%), Positives = 164/375 (43%), Gaps = 28/375 (7%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           I+SE   + ++   R L I           G+D TA  LH GH   +  L   Q  GH+ 
Sbjct: 27  IISEEDLLKKLKENRPLKIKA---------GFDPTAPDLHLGHTVLINKLKTFQDLGHEV 77

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
             L+G  T++IGDP+ +  +R  +  ++++ N +  +     F      KT      N  
Sbjct: 78  TFLIGDYTAMIGDPTGKSATRPPLSREQVEANAKTYQE--QVFKILDPNKTKVRF--NSE 133

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           W       DL+ ++ S  +V+RML  +    R    Q ++  EF Y ++Q YD + L   
Sbjct: 134 WFNQKSAADLI-QLASQQTVSRMLERDDFTKRYSNHQPIAIHEFLYPLVQGYDSIAL--- 189

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNK 249
            +  +++GG+DQ  N++ G  L  R        +T P+L    G  KM K+L   I +  
Sbjct: 190 -EADVELGGTDQTFNLLMGRTLQSRYGQESQVCITVPILEGLDGVNKMSKSLGNYIGV-- 246

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI----DRMAKLQGKEINEAKKIIATE 305
              +P   +Q   ++ D+ +  +   L+   + EI    D +A   G+   E K+I+A E
Sbjct: 247 -FDTPGAMYQKVLSMPDSLIERYFDLLSFKSLDEIKALLDEIAA--GRNPQEVKRILALE 303

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           +    H  E A  A  +A          +  P ++IS  E    + + T++  AG   + 
Sbjct: 304 LVERFHDAEAAANAHKSAGNRITEGEVPEDTPEVTISLGEFGGEIFIATILRVAGLNPNA 363

Query: 366 NEARRHLKSNAIKIN 380
             A+  +   A+K++
Sbjct: 364 AAAKDAVARGAVKVD 378


>gi|160874366|ref|YP_001553682.1| tyrosyl-tRNA synthetase [Shewanella baltica OS195]
 gi|160859888|gb|ABX48422.1| tyrosyl-tRNA synthetase [Shewanella baltica OS195]
 gi|315266601|gb|ADT93454.1| tyrosyl-tRNA synthetase [Shewanella baltica OS678]
          Length = 397

 Score =  102 bits (254), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 93/360 (25%), Positives = 166/360 (46%), Gaps = 25/360 (6%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  L   Q+ GH+ I L+G  T ++GDPS ++ +R  +  +++
Sbjct: 38  LGADPTAPDIHLGHTVILNKLRLFQELGHEVIFLIGDFTGMVGDPSGKNSTRPPLTREQV 97

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
             N E  K      +     + +     N +WL  +    ++R + S  +V RM+  +  
Sbjct: 98  LANAETYKEQVYKILDPVKTRIEF----NSSWLEPLGAAGMIR-LASKQTVARMMERDDF 152

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
           + R    QS++  EF Y +LQ YD V L  +    +++GG+DQ  N++ G +L +     
Sbjct: 153 KKRYASGQSIAIHEFMYPLLQGYDSVALQAD----VELGGTDQKFNLLMGRELQKAEGQK 208

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYN-FWQYWRNIDDADVVSFAKRLT 277
               +  PLL    G  KM K+    I +    + P N  +    +I D  +  + + L+
Sbjct: 209 PQAVIMMPLLEGLDGVKKMSKSAHNYIGV----SEPANEMFGKLMSISDDLMWRYFELLS 264

Query: 278 TLPMSEIDRMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQH 335
             P++EI++  +    G    + K  +A EI T  H    A+ A  A ++       ++ 
Sbjct: 265 FRPLAEIEQFKQDVANGSNPRDIKIALAKEIITRFHDEASAQSAHQAFVD------RAKG 318

Query: 336 MPTISISKDEVSRGMGL--LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL 393
           M    I   E+  G GL    L+  A    ST+EA R +K  A+K++   + + ++ + +
Sbjct: 319 MIPDDIDAVELVAGEGLAIANLLKDADLVASTSEAMRMIKQGAVKMDGEKLDDSRMTLPV 378


>gi|157960823|ref|YP_001500857.1| tyrosyl-tRNA synthetase [Shewanella pealeana ATCC 700345]
 gi|157845823|gb|ABV86322.1| tyrosyl-tRNA synthetase [Shewanella pealeana ATCC 700345]
          Length = 398

 Score =  102 bits (254), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 99/393 (25%), Positives = 174/393 (44%), Gaps = 45/393 (11%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           IL E   + ++   R L I          +G D TA  +H GH   L  +   Q+ GH+ 
Sbjct: 18  ILLEADLLEKLKEGRPLKI---------KLGADPTAPDIHLGHTVILNKMRTFQELGHEV 68

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           I L+G  T ++GDPS ++ +R  +  +++  N E  K      +     + +     N T
Sbjct: 69  IFLIGDFTGMVGDPSGKNSTRPPLTREQVLANAETYKQQVYKILDPAKTRIEF----NST 124

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           WL  +    ++R + S  +V RM+  +  + R    QS++  EF Y +LQ YD V L   
Sbjct: 125 WLEPLGAAGMIR-LASQQTVARMMERDDFKKRYGSGQSIAIHEFMYPLLQGYDSVAL--- 180

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNK 249
            +  +++GG+DQ  N++ G +L +         +  PLL    G  KM K+    I +++
Sbjct: 181 -EADVELGGTDQKFNLLMGRELQKSAGQKPQTVIMMPLLEGLDGVKKMSKSAHNYIGVSE 239

Query: 250 EMTSPYN---------FWQYWRNIDDADVVSFAKRLTTLPMSEIDRM-AKLQ-GKEINEA 298
                +           W+Y+      +++SF       P++E+++  A +  G    + 
Sbjct: 240 PAGEMFGKIMSISDDLMWRYF------ELLSFR------PLTEVEQFKADVDAGANPRDV 287

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVK 358
           K  +A EI    H    AE A    +  F        +  + I+  E   G+ +  L+ +
Sbjct: 288 KIALAKEIIARFHDEAAAEAAHQEFINRFQKGAIPSDIEELEIAAGE---GIAIANLLKE 344

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
           AG   ST++A R +K  A KI+   I + +LQ+
Sbjct: 345 AGLVNSTSDAMRMIKQGAAKIDGDKIEDTRLQL 377


>gi|126173409|ref|YP_001049558.1| tyrosyl-tRNA synthetase [Shewanella baltica OS155]
 gi|217974300|ref|YP_002359051.1| tyrosyl-tRNA synthetase [Shewanella baltica OS223]
 gi|125996614|gb|ABN60689.1| tyrosyl-tRNA synthetase [Shewanella baltica OS155]
 gi|217499435|gb|ACK47628.1| tyrosyl-tRNA synthetase [Shewanella baltica OS223]
          Length = 397

 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 93/356 (26%), Positives = 164/356 (46%), Gaps = 25/356 (7%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  L   Q+ GH+ I L+G  T ++GDPS ++ +R  +  +++
Sbjct: 38  LGADPTAPDIHLGHTVILNKLRLFQELGHEVIFLIGDFTGMVGDPSGKNSTRPPLTREQV 97

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
             N E  K      +     + +     N +WL  +    ++R + S  +V RM+  +  
Sbjct: 98  LANAETYKEQVYKILDPVKTRIEF----NSSWLEPLGAAGMIR-LASKQTVARMMERDDF 152

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
           + R    QS++  EF Y +LQ YD V L  +    +++GG+DQ  N++ G +L +     
Sbjct: 153 KKRYASGQSIAIHEFMYPLLQGYDSVALQAD----VELGGTDQKFNLLMGRELQKAEGQK 208

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYN-FWQYWRNIDDADVVSFAKRLT 277
               +  PLL    G  KM K+    I +    + P N  +    +I D  +  + + L+
Sbjct: 209 PQAVIMMPLLEGLDGVKKMSKSAHNYIGV----SEPANEMFGKLMSISDDLMWRYFELLS 264

Query: 278 TLPMSEIDRMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQH 335
             P++EI++  +    G    + K  +A EI T  H    A+ A  A ++       ++ 
Sbjct: 265 FRPLAEIEQFKQDVANGSNPRDIKIALAKEIITRFHDEASAQSAHQAFVD------RAKG 318

Query: 336 MPTISISKDEVSRGMGL--LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKL 389
           M    I   E+  G GL    L+  A    ST+EA R +K  A+K++   + + ++
Sbjct: 319 MIPDDIDAVELVAGDGLAIANLLKDADLVASTSEAMRMIKQGAVKMDGEKLDDSRM 374


>gi|153217135|ref|ZP_01950899.1| tyrosyl-tRNA synthetase [Vibrio cholerae 1587]
 gi|124113828|gb|EAY32648.1| tyrosyl-tRNA synthetase [Vibrio cholerae 1587]
          Length = 395

 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 89/353 (25%), Positives = 162/353 (45%), Gaps = 20/353 (5%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  L   Q  GH    L+G  T ++GDP+ ++ +R  +  +++
Sbjct: 38  LGADPTAPDIHLGHTVILNKLRTFQDLGHDVTFLIGDFTGMVGDPTGKNTTRPPLTREDV 97

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
             N E  K      ++    K   +  N+E WL  +    ++R + S  +V RML  +  
Sbjct: 98  LRNAETYKQQVFKILEPAKTK---IQFNSE-WLSQLGAEGMIR-LASNQTVARMLERDDF 152

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
           + R    Q ++  EF Y +LQ YD V +    +  +++GG+DQ  N++ G +L +     
Sbjct: 153 KKRYNNGQPIAIHEFMYPLLQGYDSVAM----ETDVELGGTDQKFNLLMGRELQKANGQK 208

Query: 220 KLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               L  PLL    G  KM K+    I +++   +P   +    +I D  + S+ + L+ 
Sbjct: 209 PQVVLMMPLLVGLDGEKKMSKSAHNYIGVSE---APSEMFGKIMSISDDLMWSYYELLSF 265

Query: 279 LPMSEIDRMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM 336
            P+ E+ +       G    + K ++A EI    H + +A+ A    +  F      +  
Sbjct: 266 RPLEEVAQFKAEVANGANPRDIKILLAKEIIARFHSQADADAAEQEFINRF-----QKGA 320

Query: 337 PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKL 389
               + + E   G+ +  L+ +AG   ST++A R +K  A+K++   + + KL
Sbjct: 321 MPEEMPEFEFESGIAISNLLKEAGLVASTSDALRMIKQGAVKLDGEKLEDAKL 373


>gi|269103471|ref|ZP_06156168.1| tyrosyl-tRNA synthetase [Photobacterium damselae subsp. damselae
           CIP 102761]
 gi|268163369|gb|EEZ41865.1| tyrosyl-tRNA synthetase [Photobacterium damselae subsp. damselae
           CIP 102761]
          Length = 395

 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 91/353 (25%), Positives = 163/353 (46%), Gaps = 20/353 (5%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  L   Q+ GH+   L+G  T ++GDP+ ++ +R  +  +++
Sbjct: 38  LGADPTAPDIHLGHTVILNKLRTFQELGHEVTFLIGDFTGMVGDPTGKNVTRPPLTREQV 97

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
             N E  K      +     K +     N +WL  +    ++R + S  +V RML  +  
Sbjct: 98  LANAETYKEQVFKILDPAKTKIEF----NSSWLSELGAEGMIR-LASNQTVARMLERDDF 152

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
           + R    + ++  EF Y +LQ YD V +  +    +++GG+DQ  N++ G ++ +     
Sbjct: 153 KKRYGENRPIAIHEFMYPLLQGYDSVAMKTD----VELGGTDQKFNLLMGREMQKSYGQK 208

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               LT PLL    G  KM K+    I +     +P   +    +I D  + S+ + L+ 
Sbjct: 209 PQVILTMPLLVGLDGVKKMSKSAHNYIGV---ADAPSEMFGKIMSISDDLMWSYFELLSF 265

Query: 279 LPMSEIDRMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM 336
            P+ E+ +  +    GK   + K ++A EI    H    +E  A AA + F +S   +  
Sbjct: 266 RPLEELAQFKQDVANGKNPRDVKFLLAKEIIARFH----SEADADAAEQEF-ISRFQKGN 320

Query: 337 PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKL 389
               + + E   GM +  L+  A    ST++A R ++  A+KI+   + + KL
Sbjct: 321 MPEEMPEFEFEAGMPIANLLKDAELVNSTSDAMRMIRQGAVKIDGEKVEDTKL 373


>gi|320451146|ref|YP_004203242.1| tyrosyl-tRNA synthetase [Thermus scotoductus SA-01]
 gi|320151315|gb|ADW22693.1| tyrosyl-tRNA synthetase [Thermus scotoductus SA-01]
          Length = 434

 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 97/385 (25%), Positives = 167/385 (43%), Gaps = 45/385 (11%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D T   LH GH   L  +   Q+ GHK + ++G  T +IGDPS R ++R  +  +E 
Sbjct: 44  LGADPTRPDLHLGHAVVLRKMRQFQELGHKVVLIIGDFTGMIGDPSGRSKTRPPLTLEET 103

Query: 100 QEN----IEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLS 155
           +EN    +E+   I              L  N+E WL  + + +++R + S  +V +ML 
Sbjct: 104 RENARTYVEQAGKILRQ-----EPHLFELRYNSE-WLEGLTFKEVVR-LTSLMTVAQMLE 156

Query: 156 FESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER 215
            E  + R +    +S  EF Y   QAYD V +  +    ++MGG+DQ  N++ G ++   
Sbjct: 157 REDFKKRYEEGIPISLHEFLYPFAQAYDSVAIRAD----IEMGGTDQKFNLLVGREVQRA 212

Query: 216 LKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAK 274
              P   A   PLL    G  KM K+L   I + +    P   ++    + DA + S+ +
Sbjct: 213 YGQPPQVAFLMPLLVGLDGREKMSKSLDNYIGVAE---PPEVMFKKLMWVPDALLESYFR 269

Query: 275 RLTTLPMSEIDRMAKLQGKEINE--AKKIIATEITTMVHGR------------------- 313
            LT L  +EI  + K      +   A+ + A      +  R                   
Sbjct: 270 LLTDLEEAEIQTLLKAGPVPAHRVLARLLTAAYALPTIPARIDRAFYESLGYSFEALGKD 329

Query: 314 ----EEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTNEA 368
                EA + A A  +        +++P + I   E+  G + +  L   AG   S  EA
Sbjct: 330 KEAGPEAVRQAEARYDQVAKGAIPENIPEVVIPASELKEGRIWVARLFTLAGLTPSNAEA 389

Query: 369 RRHLKSNAIKINNSIISNEKLQIKL 393
           RR +++  ++++  +I +  L++ L
Sbjct: 390 RRLIQNRGLRLDGELIEDAGLEVDL 414


>gi|171060119|ref|YP_001792468.1| tyrosyl-tRNA synthetase [Leptothrix cholodnii SP-6]
 gi|170777564|gb|ACB35703.1| tyrosyl-tRNA synthetase [Leptothrix cholodnii SP-6]
          Length = 413

 Score =  101 bits (252), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 102/376 (27%), Positives = 170/376 (45%), Gaps = 32/376 (8%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  L  LQ  GH  I L+G  TS+IGDPS R+ +R  + +++I
Sbjct: 56  LGLDPTAPDIHLGHTVVLNKLRQLQDLGHTVIFLIGDFTSMIGDPSGRNTTRPPLTAEQI 115

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           + N E      S  +     +T+  +  N  W C       +  + S ++V RM+     
Sbjct: 116 KLNAETYYRQASLVLD--PARTE--IRYNSEW-CDPLGARGMIALASRYTVARMMERNDF 170

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R     S++  EF Y ++Q YD V L  +    L++GG+DQ  N++ G  L       
Sbjct: 171 HERFHAGTSIAVHEFLYPLMQGYDSVALKSD----LELGGTDQKFNLLMGRHLQAEYGQE 226

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               LT PLL    G  KM K+    I +++      + +    +I D  + S+    T 
Sbjct: 227 PQCILTMPLLVGLDGVEKMSKSKGNYIGISEAAN---DMFAKLLSISDTLMWSY---FTL 280

Query: 279 LPMSEIDRMAKLQ-----GKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS 333
           L     + +A L+     G+   +AK ++A EIT   HG   A+ A           I  
Sbjct: 281 LSFRSEEAIAALKAEVDAGRNPKDAKVLLAKEITARFHGAAAADAAEQDFQNRAKGGI-P 339

Query: 334 QHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL 393
             +P +S+S       +G+  L+ +A    S++EA R ++   ++I+  +IS++ L++  
Sbjct: 340 DDLPQVSLS----GAPLGIGALLKQANLVPSSSEAMRLIEQGGVRIDGGVISDKGLKL-- 393

Query: 394 QDFDSTGNIKLSFGKK 409
               + G   L  GK+
Sbjct: 394 ----AAGRYVLQVGKR 405


>gi|154174441|ref|YP_001407884.1| tyrosyl-tRNA synthetase [Campylobacter curvus 525.92]
 gi|112803440|gb|EAU00784.1| tyrosyl-tRNA synthetase [Campylobacter curvus 525.92]
          Length = 401

 Score =  101 bits (252), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 115/414 (27%), Positives = 187/414 (45%), Gaps = 34/414 (8%)

Query: 7   DFLSILSE--RGFIHQISNPRELDILCS--QGVVTAYI--GYDLTASSLHAGHLTQLMLL 60
           D + I+ E  RG    I   R  +++ +  +     Y+  G+D TA  LH GH   L  +
Sbjct: 3   DLMQIMQEVKRGVAEMIDEDRIFNLIKNFYEKGENFYVKAGFDPTAPDLHLGHTVVLGKM 62

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             LQK G     L+G  T  IGDPS +  +R+ +  Q + +N +  +      +     K
Sbjct: 63  ALLQKHGAIVQFLIGDFTGQIGDPSGKSATRKKLDKQTVLKNAKTYEEQVFKILDPAKTK 122

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               ++ N TW   +    ++ E+ S F V RML  +    R+K    +S  EF Y ++Q
Sbjct: 123 ----IMFNSTWSNELGAAGMI-ELASTFPVARMLERDDFEKRIKAGTPISISEFLYPLMQ 177

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFA-LTSPLLTTASGT-KMG 238
            YD V +     C ++MGG+DQ  N++ G  L       K  A +T PLL    G  KM 
Sbjct: 178 GYDSVAMK----CDIEMGGTDQKFNLLMGRTLQRIYNVGKEQAVITMPLLEGLDGVNKMS 233

Query: 239 KTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGK-EI 295
           K+L   I +     +P   +    +I D  +  +   L+     EI   R +   GK   
Sbjct: 234 KSLGNYIGVT---DAPNEMFAKTLSISDELMWRWYDLLSEKSTGEIAALRASVDAGKYHP 290

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTL 355
            +AK+ +A EIT   HG      AA AA E F+ S+H Q+     +   E+S    ++  
Sbjct: 291 KKAKEDLAYEITARYHGE----AAAKAASEEFN-SVHVQNQIPSDLETFEMSSPAWIVEA 345

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
           +       + ++ARR + +NA+ ++   I++E+L++       +G   L  GKK
Sbjct: 346 LTHCKLCPTNSQARRDIAANAVSVDQKKINDEQLKL------DSGIYVLQVGKK 393


>gi|169829079|ref|YP_001699237.1| tyrosyl-tRNA synthetase 2 [Lysinibacillus sphaericus C3-41]
 gi|168993567|gb|ACA41107.1| Tyrosyl-tRNA synthetase 2 [Lysinibacillus sphaericus C3-41]
          Length = 404

 Score =  101 bits (252), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 93/378 (24%), Positives = 172/378 (45%), Gaps = 23/378 (6%)

Query: 36  VTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMR 95
           +T  +G D +A  +H GH   L  +  LQ  GH  + ++G  T  IGDP+ + + R  + 
Sbjct: 39  LTIKLGLDPSAPDIHLGHAVVLRKIKQLQDLGHHAVIVIGDFTGRIGDPTGKSKGRVALS 98

Query: 96  SQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLS 155
            + + EN    K       K    +   +  N+E WL  + + +++ ++ +  SV R+L 
Sbjct: 99  DELVGEN---AKTYCEQIFKVLDEEKTTIRFNSE-WLAKLNFEEVI-QLAATTSVARILE 153

Query: 156 FESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER 215
            E  + R  ++  +   EF Y ++QAYD VEL  +    +++GG+DQ  NI+ G  L   
Sbjct: 154 REDFQKRYHQQIPIGMHEFFYPLMQAYDSVELKAD----IELGGTDQTFNILMGRTLQRH 209

Query: 216 LKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAK 274
               K  A+  PLL    G  KM K+L   I +++   +P   ++    I D+ ++ + +
Sbjct: 210 RGLEKQIAIFMPLLEGLDGVEKMSKSLGNYIGIHE---APEVMFKKIMEIPDSLIIKYFE 266

Query: 275 RLT---TLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSI 331
             T    L +  I    ++ G+   + K  +A  +T + HG      A +     F   +
Sbjct: 267 LATDEHPLQVQAIQERLRM-GENPRDLKLHLAEIVTALYHGHAATMDAKSYFEAAFQKKV 325

Query: 332 HSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
              ++PT+ +  D+  R   ++  ++   F  S ++  R +K N + +N   ++ + L  
Sbjct: 326 IPTNIPTLLLEIDK-ERIEDIIPQLISIHFIQSKSDFLRLIKQNGVSLNGEKMAADDLSR 384

Query: 392 KLQDFDSTGNIKLSFGKK 409
            L + D      L  GKK
Sbjct: 385 VLMNEDV-----LQIGKK 397


>gi|327483435|gb|AEA77842.1| Tyrosyl-tRNA synthetase cluster 1 [Vibrio cholerae LMA3894-4]
          Length = 395

 Score =  101 bits (252), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 89/353 (25%), Positives = 161/353 (45%), Gaps = 20/353 (5%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  L   Q  GH    L+G  T ++GDP+ ++ +R  +  +++
Sbjct: 38  LGADPTAPDIHLGHTVILNKLRTFQDLGHDVTFLIGDFTGMVGDPTGKNTTRPPLTREDV 97

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
             N E  K      +     K   +  N+E WL  +    ++R + S  +V RML  +  
Sbjct: 98  LRNAETYKQQVFKILDPAKTK---IQFNSE-WLSQLGAEGMIR-LASNQTVARMLERDDF 152

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
           + R    Q ++  EF Y +LQ YD V +    +  +++GG+DQ  N++ G +L +     
Sbjct: 153 KKRYNNGQPIAIHEFMYPLLQGYDSVAM----ETDVELGGTDQKFNLLMGRELQKANGQK 208

Query: 220 KLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               L  PLL    G  KM K+    I +++   +P   +    +I D  + S+ + L+ 
Sbjct: 209 PQVVLMMPLLVGLDGEKKMSKSAHNYIGVSE---APSEMFGKIMSISDDLMWSYYELLSF 265

Query: 279 LPMSEIDRMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM 336
            P+ E+ +       G    + K ++A EI    H + +A+ A    +  F      +  
Sbjct: 266 RPLEEVAQFKAEVANGSNPRDIKILLAKEIIARFHSQADADAAEQEFINRF-----QKGA 320

Query: 337 PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKL 389
               + + E   G+ +  L+ +AG   ST++A R +K  A+K++   + + KL
Sbjct: 321 MPEEMPEFEFESGIAISNLLKEAGLVASTSDALRMIKQGAVKLDGEKLEDAKL 373


>gi|282897374|ref|ZP_06305376.1| Tyrosyl-tRNA synthetase, class Ib [Raphidiopsis brookii D9]
 gi|281198026|gb|EFA72920.1| Tyrosyl-tRNA synthetase, class Ib [Raphidiopsis brookii D9]
          Length = 398

 Score =  101 bits (252), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 93/375 (24%), Positives = 172/375 (45%), Gaps = 26/375 (6%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D T + +H GH   +  L   Q  GH  + ++G  T+ IGDP+ + + RR +  +++
Sbjct: 44  LGIDPTGADIHLGHSIPVRKLRAFQDAGHTAVLIIGDFTARIGDPTGKSDVRRQLTEEDV 103

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
            +N +         + + T     +  N++ WL  +    +L E+ S  +V +ML+ E  
Sbjct: 104 SQNAQTYLEQVRPILDFDTPGRLEVHYNSQ-WLSGLDLAKIL-ELLSTMTVGQMLAKEGF 161

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R K+E  +   EF Y ++Q +D V +  +    +++GG+DQ  NI  G DL       
Sbjct: 162 AERYKKENPIFLHEFLYPLMQGFDSVAIRSD----VELGGTDQKFNIAVGRDLQRHFGLR 217

Query: 220 KLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
             F L  P+L    G  KM K+L   + L++    P   +Q  + + D  +  + + LT 
Sbjct: 218 PQFGLLLPILIGTDGIQKMSKSLGNYVGLSEH---PSQKYQKLQGVPDHLLTQYFELLTD 274

Query: 279 LPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPT 338
           LP+  +    +       + ++ +A EI    HG  +A +A  AA       +    +P 
Sbjct: 275 LPLDTLPDNPR-------DRQQFLAWEIVRQYHGEIQANQAQEAAKSKGKEGV----LPE 323

Query: 339 ISISKDEVSRGMGLLTLIVKA-GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
            S++   +++    L  I+ A G   ST E +R ++   ++++   I++  L       D
Sbjct: 324 FSLAN--ITQFPTKLAHILSASGLCKSTGEGKRKIQEGGVRLDGEKIADMDLTF-FGPGD 380

Query: 398 STGNIKLSFGKKNHI 412
            +G + L  GKKN +
Sbjct: 381 LSGKV-LQVGKKNFV 394


>gi|82523698|emb|CAI78479.1| tyrosyl-tRNA synthetase [uncultured beta proteobacterium]
          Length = 402

 Score =  101 bits (252), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 87/356 (24%), Positives = 159/356 (44%), Gaps = 17/356 (4%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   L  L   Q+ GH+ + L+G  T +IGDP+ ++ +R  +  + + 
Sbjct: 42  GFDPTAPDLHLGHTVLLNKLRQFQQLGHQVVFLIGDFTGMIGDPTGKNTTRPPLTREAVA 101

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           EN +  +       K        +  N+E W+  +  + ++R + +  +V RML  +   
Sbjct: 102 ENAKTYQ---EQVFKILDPALTEVRFNSE-WMEGLGSVGMIR-LAATHTVARMLERDDFH 156

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R   +Q ++  EF Y ++Q YD V L  +    +++GG+DQ  N++ G +L +    P 
Sbjct: 157 KRYTGQQPIAIHEFLYPLIQGYDSVALKAD----IELGGTDQKFNLLMGRELQKHHGQPA 212

Query: 221 LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTL 279
              LT PLL    G  KM K+L   I +N+    P   +    +I D  +  +   L+  
Sbjct: 213 QCILTMPLLEGTDGVNKMSKSLGNYIGINE---PPQEIFGKLMSISDELMWRYIHLLSFE 269

Query: 280 PMSEID--RMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMP 337
            +  I   +     G      K   A EI    H    A +A       F        MP
Sbjct: 270 SLQTIASWKQQVADGANPRNIKVRFAQEIVARFHDAAAATQALADFEARFQKGALPDEMP 329

Query: 338 TISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL 393
            IS+    +   + +  L+ +AG  +ST++A R +    ++++   ++++ + + +
Sbjct: 330 EISLPG--IEGALLVPQLLKQAGLVSSTSDAMRQIAGGGVRLDGERVADKGVAVPV 383


>gi|229525283|ref|ZP_04414688.1| tyrosyl-tRNA synthetase [Vibrio cholerae bv. albensis VL426]
 gi|229338864|gb|EEO03881.1| tyrosyl-tRNA synthetase [Vibrio cholerae bv. albensis VL426]
          Length = 395

 Score =  101 bits (252), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 89/353 (25%), Positives = 161/353 (45%), Gaps = 20/353 (5%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  L   Q  GH    L+G  T ++GDP+ ++ +R  +  +++
Sbjct: 38  LGADPTAPDIHLGHTVILNKLRTFQDLGHDVTFLIGDFTGMVGDPTGKNTTRPPLTREDV 97

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
             N E  K      +     K   +  N+E WL  +    ++R + S  +V RML  +  
Sbjct: 98  LRNAETYKKQVFKILDPAKTK---IQFNSE-WLSQLGAEGMIR-LASNQTVARMLERDDF 152

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
           + R    Q ++  EF Y +LQ YD V +    +  +++GG+DQ  N++ G +L +     
Sbjct: 153 KKRYNNGQPIAIHEFMYPLLQGYDSVAM----ETDVELGGTDQKFNLLMGRELQKANGQK 208

Query: 220 KLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               L  PLL    G  KM K+    I +++   +P   +    +I D  + S+ + L+ 
Sbjct: 209 PQVVLMMPLLVGLDGEKKMSKSAHNYIGVSE---APSEMFGKIMSISDDLMWSYYELLSF 265

Query: 279 LPMSEIDRMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM 336
            P+ E+ +       G    + K ++A EI    H + +A+ A    +  F      +  
Sbjct: 266 RPLEEVAQFKAEVANGANPRDIKILLAKEIIARFHSQADADAAEQEFINRF-----QKGA 320

Query: 337 PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKL 389
               + + E   G+ +  L+ +AG   ST++A R +K  A+K++   + + KL
Sbjct: 321 MPEEMPEFEFESGIAISNLLKEAGLVASTSDALRMIKQGAVKLDGEKLEDAKL 373


>gi|93007093|ref|YP_581530.1| tyrosyl-tRNA synthetase [Psychrobacter cryohalolentis K5]
 gi|92394771|gb|ABE76046.1| tyrosyl-tRNA synthetase [Psychrobacter cryohalolentis K5]
          Length = 403

 Score =  101 bits (252), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 94/378 (24%), Positives = 178/378 (47%), Gaps = 27/378 (7%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           ILSE   + ++   R L I           G+D TA  LH GH   +  L   Q  GH+ 
Sbjct: 22  ILSEDDLVKKLKLNRPLRIKA---------GFDPTAPDLHLGHTVLINKLKHFQDLGHEI 72

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKI-KGIFSSFIKYGTGKTDALMLNNE 129
             L+G  T+ IGDPS ++ +R  +  ++I+ N +   + +F    K  T     ++ N+E
Sbjct: 73  YFLIGDYTAKIGDPSGKNSTRPPLTDEQIKVNAQTYAEQVFKILDKEKT----RIVFNSE 128

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
            W   +   D++ ++ S  +V+RML  +    R   +  ++  EF Y ++Q YD + L  
Sbjct: 129 -WFKDMSAGDMI-QLSSQLTVSRMLERDDFSKRYAAQTPIAIHEFLYPLVQGYDSIALKA 186

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLN 248
           +    +++GG+DQ  NI+ G  L  R        +T P+L    G  KM K+L   + + 
Sbjct: 187 D----VELGGTDQTFNILMGRTLQGRYGQEPQVCITVPILEGLDGVNKMSKSLGNYVGI- 241

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR-MAKLQ-GKEINEAKKIIATEI 306
               +P   +Q   ++ D  +  + + L+  PM E++  MA+++ G+   E K+I+A E+
Sbjct: 242 --YDAPGTMYQKLLSMPDTLIRRYFEFLSFKPMEEVEALMAEMENGRNPQEIKRILAEEL 299

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
               H  + A  A  +A            +P +++   E    + +  ++ +A  A +++
Sbjct: 300 IERFHDADAAANAHKSAGNVLADGELPVDLPEVTLDL-EGQDALFITQILNQAELAKNSS 358

Query: 367 EARRHLKSNAIKINNSII 384
            A+  +K  A+K++  ++
Sbjct: 359 SAKDMIKRGAVKVDGEVV 376


>gi|153801737|ref|ZP_01956323.1| tyrosyl-tRNA synthetase [Vibrio cholerae MZO-3]
 gi|153830951|ref|ZP_01983618.1| tyrosyl-tRNA synthetase [Vibrio cholerae 623-39]
 gi|229512893|ref|ZP_04402360.1| tyrosyl-tRNA synthetase [Vibrio cholerae TMA 21]
 gi|229530436|ref|ZP_04419824.1| tyrosyl-tRNA synthetase [Vibrio cholerae 12129(1)]
 gi|262189648|ref|ZP_06048030.1| tyrosyl-tRNA synthetase [Vibrio cholerae CT 5369-93]
 gi|124122702|gb|EAY41445.1| tyrosyl-tRNA synthetase [Vibrio cholerae MZO-3]
 gi|148873564|gb|EDL71699.1| tyrosyl-tRNA synthetase [Vibrio cholerae 623-39]
 gi|229332209|gb|EEN97697.1| tyrosyl-tRNA synthetase [Vibrio cholerae 12129(1)]
 gi|229350142|gb|EEO15095.1| tyrosyl-tRNA synthetase [Vibrio cholerae TMA 21]
 gi|262034469|gb|EEY52827.1| tyrosyl-tRNA synthetase [Vibrio cholerae CT 5369-93]
          Length = 395

 Score =  101 bits (252), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 89/353 (25%), Positives = 161/353 (45%), Gaps = 20/353 (5%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  L   Q  GH    L+G  T ++GDP+ ++ +R  +  +++
Sbjct: 38  LGADPTAPDIHLGHTVILNKLRTFQDLGHDVTFLIGDFTGMVGDPTGKNTTRPPLTREDV 97

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
             N E  K      +     K   +  N+E WL  +    ++R + S  +V RML  +  
Sbjct: 98  LRNAETYKQQVFKILDPAKTK---IQFNSE-WLSQLGAEGMIR-LASNQTVARMLERDDF 152

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
           + R    Q ++  EF Y +LQ YD V +    +  +++GG+DQ  N++ G +L +     
Sbjct: 153 KKRYNNGQPIAIHEFMYPLLQGYDSVAM----ETDVELGGTDQKFNLLMGRELQKANGQK 208

Query: 220 KLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               L  PLL    G  KM K+    I +++   +P   +    +I D  + S+ + L+ 
Sbjct: 209 PQVVLMMPLLVGLDGEKKMSKSAHNYIGVSE---APSEMFGKIMSISDDLMWSYYELLSF 265

Query: 279 LPMSEIDRMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM 336
            P+ E+ +       G    + K ++A EI    H + +A+ A    +  F      +  
Sbjct: 266 RPLEEVAQFKAEVANGANPRDIKILLAKEIIARFHSQADADAAEQEFINRF-----QKGA 320

Query: 337 PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKL 389
               + + E   G+ +  L+ +AG   ST++A R +K  A+K++   + + KL
Sbjct: 321 MPEEMPEFEFESGIAISNLLKEAGLVASTSDALRMIKQGAVKLDGEKLEDAKL 373


>gi|15640651|ref|NP_230280.1| tyrosyl-tRNA synthetase [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|121591670|ref|ZP_01678906.1| tyrosyl-tRNA synthetase [Vibrio cholerae 2740-80]
 gi|147673048|ref|YP_001216125.1| tyrosyl-tRNA synthetase [Vibrio cholerae O395]
 gi|153823558|ref|ZP_01976225.1| tyrosyl-tRNA synthetase [Vibrio cholerae B33]
 gi|227080812|ref|YP_002809363.1| tyrosyl-tRNA synthetase [Vibrio cholerae M66-2]
 gi|229505747|ref|ZP_04395257.1| tyrosyl-tRNA synthetase [Vibrio cholerae BX 330286]
 gi|229509220|ref|ZP_04398705.1| tyrosyl-tRNA synthetase [Vibrio cholerae B33]
 gi|229519571|ref|ZP_04409014.1| tyrosyl-tRNA synthetase [Vibrio cholerae RC9]
 gi|229608858|ref|YP_002879506.1| tyrosyl-tRNA synthetase [Vibrio cholerae MJ-1236]
 gi|254850865|ref|ZP_05240215.1| tyrosyl-tRNA synthetase 2 [Vibrio cholerae MO10]
 gi|255744152|ref|ZP_05418105.1| tyrosyl-tRNA synthetase [Vibrio cholera CIRS 101]
 gi|262155726|ref|ZP_06028850.1| tyrosyl-tRNA synthetase [Vibrio cholerae INDRE 91/1]
 gi|262169931|ref|ZP_06037621.1| tyrosyl-tRNA synthetase [Vibrio cholerae RC27]
 gi|297580757|ref|ZP_06942683.1| tyrosyl-tRNA synthetase [Vibrio cholerae RC385]
 gi|298500747|ref|ZP_07010550.1| tyrosyl-tRNA synthetase [Vibrio cholerae MAK 757]
 gi|81545368|sp|Q9KU92|SYY2_VIBCH RecName: Full=Tyrosyl-tRNA synthetase 2; AltName:
           Full=Tyrosine--tRNA ligase 2; Short=TyrRS 2
 gi|9655066|gb|AAF93797.1| tyrosyl-tRNA synthetase [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|121546470|gb|EAX56692.1| tyrosyl-tRNA synthetase [Vibrio cholerae 2740-80]
 gi|126518927|gb|EAZ76150.1| tyrosyl-tRNA synthetase [Vibrio cholerae B33]
 gi|146314931|gb|ABQ19470.1| tyrosyl-tRNA synthetase [Vibrio cholerae O395]
 gi|227008700|gb|ACP04912.1| tyrosyl-tRNA synthetase [Vibrio cholerae M66-2]
 gi|227012456|gb|ACP08666.1| tyrosyl-tRNA synthetase [Vibrio cholerae O395]
 gi|229344260|gb|EEO09235.1| tyrosyl-tRNA synthetase [Vibrio cholerae RC9]
 gi|229353792|gb|EEO18728.1| tyrosyl-tRNA synthetase [Vibrio cholerae B33]
 gi|229357970|gb|EEO22887.1| tyrosyl-tRNA synthetase [Vibrio cholerae BX 330286]
 gi|229371513|gb|ACQ61936.1| tyrosyl-tRNA synthetase [Vibrio cholerae MJ-1236]
 gi|254846570|gb|EET24984.1| tyrosyl-tRNA synthetase 2 [Vibrio cholerae MO10]
 gi|255738092|gb|EET93484.1| tyrosyl-tRNA synthetase [Vibrio cholera CIRS 101]
 gi|262021665|gb|EEY40376.1| tyrosyl-tRNA synthetase [Vibrio cholerae RC27]
 gi|262030437|gb|EEY49077.1| tyrosyl-tRNA synthetase [Vibrio cholerae INDRE 91/1]
 gi|297535173|gb|EFH74008.1| tyrosyl-tRNA synthetase [Vibrio cholerae RC385]
 gi|297540528|gb|EFH76586.1| tyrosyl-tRNA synthetase [Vibrio cholerae MAK 757]
          Length = 395

 Score =  101 bits (252), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 89/353 (25%), Positives = 161/353 (45%), Gaps = 20/353 (5%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  L   Q  GH    L+G  T ++GDP+ ++ +R  +  +++
Sbjct: 38  LGADPTAPDIHLGHTVILNKLRTFQDLGHDVTFLIGDFTGMVGDPTGKNTTRPPLTREDV 97

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
             N E  K      +     K   +  N+E WL  +    ++R + S  +V RML  +  
Sbjct: 98  LRNAETYKQQVFKILDPAKTK---IQFNSE-WLSKLGAEGMIR-LASNQTVARMLERDDF 152

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
           + R    Q ++  EF Y +LQ YD V +    +  +++GG+DQ  N++ G +L +     
Sbjct: 153 KKRYNNGQPIAIHEFMYPLLQGYDSVAM----ETDVELGGTDQKFNLLMGRELQKANGQK 208

Query: 220 KLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               L  PLL    G  KM K+    I +++   +P   +    +I D  + S+ + L+ 
Sbjct: 209 PQVVLMMPLLVGLDGEKKMSKSAHNYIGVSE---APSEMFGKIMSISDDLMWSYYELLSF 265

Query: 279 LPMSEIDRMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM 336
            P+ E+ +       G    + K ++A EI    H + +A+ A    +  F      +  
Sbjct: 266 RPLEEVAQFKAEVANGANPRDIKILLAKEIIARFHSQADADAAEQEFINRF-----QKGA 320

Query: 337 PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKL 389
               + + E   G+ +  L+ +AG   ST++A R +K  A+K++   + + KL
Sbjct: 321 MPEEMPEFEFESGIAISNLLKEAGLVASTSDALRMIKQGAVKLDGEKLEDAKL 373


>gi|229520922|ref|ZP_04410344.1| tyrosyl-tRNA synthetase [Vibrio cholerae TM 11079-80]
 gi|229342155|gb|EEO07151.1| tyrosyl-tRNA synthetase [Vibrio cholerae TM 11079-80]
          Length = 395

 Score =  101 bits (251), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 89/353 (25%), Positives = 161/353 (45%), Gaps = 20/353 (5%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  L   Q  GH    L+G  T ++GDP+ ++ +R  +  +++
Sbjct: 38  LGADPTAPDIHLGHTVILNKLRTFQDLGHDVTFLIGDFTGMVGDPTGKNTTRPPLTREDV 97

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
             N E  K      +     K   +  N+E WL  +    ++R + S  +V RML  +  
Sbjct: 98  LRNAETYKQQVFKILDPAKTK---IQFNSE-WLSQLGAEGMIR-LASNQTVARMLERDDF 152

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
           + R    Q ++  EF Y +LQ YD V +    +  +++GG+DQ  N++ G +L +     
Sbjct: 153 KKRYSNGQPIAIHEFMYPLLQGYDSVAM----ETDVELGGTDQKFNLLMGRELQKANGQK 208

Query: 220 KLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               L  PLL    G  KM K+    I +++   +P   +    +I D  + S+ + L+ 
Sbjct: 209 PQVVLMMPLLVGLDGEKKMSKSAHNYIGVSE---APSEMFGKIMSISDDLMWSYYELLSF 265

Query: 279 LPMSEIDRMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM 336
            P+ E+ +       G    + K ++A EI    H + +A+ A    +  F      +  
Sbjct: 266 RPLEEVAQFKAEVANGSNPRDIKILLAKEIIARFHSQADADAAEQEFINRF-----QKGA 320

Query: 337 PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKL 389
               + + E   G+ +  L+ +AG   ST++A R +K  A+K++   + + KL
Sbjct: 321 MPEEMPEFEFESGIAISNLLKEAGLVASTSDALRMIKQGAVKLDGEKLEDAKL 373


>gi|190572485|ref|YP_001970330.1| tyrosyl-tRNA synthetase [Stenotrophomonas maltophilia K279a]
 gi|190010407|emb|CAQ44015.1| putative tyrosyl-tRNA synthetase [Stenotrophomonas maltophilia
           K279a]
          Length = 403

 Score =  101 bits (251), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 95/368 (25%), Positives = 159/368 (43%), Gaps = 53/368 (14%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   L  +   Q  GH+ I L+G  T +IGDPS +  +R+ +  +++ 
Sbjct: 39  GFDPTAPDLHLGHTVLLNKMRQFQDLGHQVIFLIGDFTGMIGDPSGKSLTRKPLSREDVL 98

Query: 101 ENIEKI-KGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
            N     + +F    +  T     +  N+E W   +   D++R  G   +V RML  +  
Sbjct: 99  ANARTYEEQVFKVLDRSRT----EVRFNSE-WFGKMGAADMIRLAGQ-HTVARMLERDDF 152

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R   +QS++  EF Y ++Q YD V L    +  +++GG+DQ  N++ G  L E     
Sbjct: 153 AKRYAAQQSIAIHEFLYPLVQGYDSVAL----EADVELGGTDQKFNLLMGRGLQEHHGQK 208

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEM------TSPYNFWQYWR-------NID 265
               LT PLL    G  KM K+L   I +++        T   +    WR       +I 
Sbjct: 209 PQVVLTMPLLEGLDGVNKMSKSLGNYIGISEPAIDIVTKTMKVDDTLMWRWIELLSFDIS 268

Query: 266 DADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEA-------EK 318
            A+ V   +++    ++   R+ KL+          +A E+ T  H    A       E 
Sbjct: 269 QAEAVQLREQVANGGLNP--RVVKLR----------LARELATRFHDAAAAEQAIAGWEA 316

Query: 319 AATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIK 378
           A T   +   + +    +P           G+ +  L+  AG   S +EA R LK  A+K
Sbjct: 317 AVTGQGDITQLPLQDVAIPV---------EGLRIAALLTAAGLTPSNSEANRKLKERAVK 367

Query: 379 INNSIISN 386
           ++  ++ +
Sbjct: 368 VDGEVVED 375


>gi|254292197|ref|ZP_04962965.1| tyrosyl-tRNA synthetase [Vibrio cholerae AM-19226]
 gi|150421878|gb|EDN13857.1| tyrosyl-tRNA synthetase [Vibrio cholerae AM-19226]
          Length = 395

 Score =  101 bits (251), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 89/353 (25%), Positives = 161/353 (45%), Gaps = 20/353 (5%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  L   Q  GH    L+G  T ++GDP+ ++ +R  +  +++
Sbjct: 38  LGADPTAPDIHLGHTVILNKLRTFQDLGHDVTFLIGDFTGMVGDPTGKNTTRPPLTREDV 97

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
             N E  K      +     K   +  N+E WL  +    ++R + S  +V RML  +  
Sbjct: 98  LRNAETYKQQVFKILDPAKTK---IQFNSE-WLSKLGAEGMIR-LASNQTVARMLERDDF 152

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
           + R    Q ++  EF Y +LQ YD V +    +  +++GG+DQ  N++ G +L +     
Sbjct: 153 KKRYNNGQPIAIHEFMYPLLQGYDSVAM----ETDVELGGTDQKFNLLMGRELQKANGQK 208

Query: 220 KLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               L  PLL    G  KM K+    I +++   +P   +    +I D  + S+ + L+ 
Sbjct: 209 PQVVLMMPLLVGLDGEKKMSKSAHNYIGVSE---APSEMFGKIMSISDDLMWSYYELLSF 265

Query: 279 LPMSEIDRMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM 336
            P+ E+ +       G    + K ++A EI    H + +A+ A    +  F      +  
Sbjct: 266 RPLEEVAQFKAEVANGTNPRDIKILLAKEIIARFHSQADADAAEQEFINRF-----QKGA 320

Query: 337 PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKL 389
               + + E   G+ +  L+ +AG   ST++A R +K  A+K++   + + KL
Sbjct: 321 MPEEMPEFEFESGIAISNLLKEAGLVASTSDALRMIKQGAVKLDGEKLEDAKL 373


>gi|148240282|ref|YP_001225669.1| tyrosyl-tRNA synthetase [Synechococcus sp. WH 7803]
 gi|147848821|emb|CAK24372.1| Tyrosyl-tRNA synthetase [Synechococcus sp. WH 7803]
          Length = 414

 Score =  101 bits (251), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 96/395 (24%), Positives = 167/395 (42%), Gaps = 61/395 (15%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D T SS+H GH      L   Q  GH  + ++G  T+ IGDP+ + ++R  + ++++
Sbjct: 49  LGIDPTGSSIHLGHSILFRKLRAFQDAGHTAVLIIGDFTARIGDPTGKSDTRVQLTAEQV 108

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALM----------LNNETWLCSIKYIDLLREIGSFFS 149
             N       + + +  G  K  AL+            N  WL  +    ++  +G+  +
Sbjct: 109 DAN----AATYLAQLGQGQPKDTALLDFETPGRLEVRRNSEWLEGLDLPAVIGLLGT-AT 163

Query: 150 VNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICG 209
           V +ML+ +    R      ++  EF Y +LQ YD V  A N D  +++GG+DQ  N+  G
Sbjct: 164 VGQMLAKDDFSKRYGSGTPIALHEFLYPLLQGYDSV--AVNAD--VELGGTDQKFNVAMG 219

Query: 210 IDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDAD 268
            DL         F L  P+L    G  KM K+L   + L ++   P + +     + D  
Sbjct: 220 RDLQRHFGKGTQFGLLLPILVGLDGVQKMSKSLGNTVGLEED---PLSMYSKLEKVGDGA 276

Query: 269 VVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEK---------- 318
           +  +   LT L ++ +    +       E +K +A  +T   HG E A K          
Sbjct: 277 INDYVTLLTNLDLAALPENPR-------EKQKAMALAVTASRHGLEAAAKAQADAASLVG 329

Query: 319 -AATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAI 377
            A  AA E  + S+   + P  +              L+   G   S+++ARR +K  A+
Sbjct: 330 GAGDAAAEVPEASLAQVNFPAKA------------FYLLSAVGICASSSDARRQIKGGAV 377

Query: 378 KINNSIISNEKLQIKLQDFDSTGNIK---LSFGKK 409
           ++    I++       Q+F +   ++   L  GKK
Sbjct: 378 RLEGEKITDPN-----QEFATAAELEGKVLQLGKK 407


>gi|194364078|ref|YP_002026688.1| tyrosyl-tRNA synthetase [Stenotrophomonas maltophilia R551-3]
 gi|194346882|gb|ACF50005.1| tyrosyl-tRNA synthetase [Stenotrophomonas maltophilia R551-3]
          Length = 403

 Score =  101 bits (251), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 95/368 (25%), Positives = 159/368 (43%), Gaps = 53/368 (14%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   L  +   Q  GH+ I L+G  T +IGDPS +  +R+ +   ++ 
Sbjct: 39  GFDPTAPDLHLGHTVLLNKMRQFQDLGHQVIFLIGDFTGMIGDPSGKSLTRKPLSKDDVL 98

Query: 101 ENIEKI-KGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
            N     + +F    +  T     +  N+E W   +   D++R  G   +V RML  +  
Sbjct: 99  ANARTYEEQVFKVLDRSRT----EVRFNSE-WFGKMGAADMIRLAGQ-HTVARMLERDDF 152

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R   +QS++  EF Y ++Q YD V L    +  +++GG+DQ  N++ G  L E     
Sbjct: 153 AKRYAAQQSIAIHEFLYPLVQGYDSVAL----EADVELGGTDQKFNLLMGRGLQEHHGQK 208

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEM------TSPYNFWQYWR-------NID 265
               LT PLL    G  KM K+L   I +++        T   +    WR       +I 
Sbjct: 209 PQVVLTMPLLEGLDGVNKMSKSLGNYIGISEPAIDIVTKTMKVDDTLMWRWIELLSFDIS 268

Query: 266 DADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEA-------EK 318
            A+ V   +++    ++   R+ KL+          +A E+ T  H    A       E 
Sbjct: 269 QAEAVQLREQVANGGLNP--RVVKLR----------LARELATRFHDAAAAEQAVAGWEA 316

Query: 319 AATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIK 378
           A T   +   + +    +P         + G+ +  L+  AG   S +EA R LK  A+K
Sbjct: 317 AVTGQGDITQLPLQDVAIP---------AEGLRIAALLTAAGLTPSNSEANRKLKERAVK 367

Query: 379 INNSIISN 386
           ++  ++ +
Sbjct: 368 VDGEVVED 375


>gi|294338521|emb|CAZ86850.1| Tyrosyl-tRNA synthetase (Tyrosine--tRNA ligase) (TyrRS) (TyrRZ)
           [Thiomonas sp. 3As]
          Length = 411

 Score =  100 bits (250), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 97/374 (25%), Positives = 171/374 (45%), Gaps = 24/374 (6%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  L  LQ  GH  I L+G  TS IGDPS R+ +R  +  ++I
Sbjct: 52  LGLDPTAPDIHIGHTVVLNKLRQLQDLGHTVIFLIGDFTSRIGDPSGRNATRPPLTIEQI 111

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           + N +      S  +     KT+  +  N  W   +    ++R + + +++ R+L  +  
Sbjct: 112 KTNAQTYYAQASLVLD--PQKTE--IRYNSEWSEPLGADGMIR-LAAKYTLARLLERDDF 166

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R K    ++  E  Y ++Q +D V L  +    L++GG+DQ  N++ G +L       
Sbjct: 167 TKRFKEGVPIAMHELLYPLMQGFDSVALKSD----LELGGTDQKFNLLVGRELQREYGQE 222

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               LT PLL    G  KM K+    I + +   +P   +    +I D  +  + + L+ 
Sbjct: 223 PQCILTMPLLEGLDGVEKMSKSKGNYIGIQE---APATMFAKLLSISDVLMWRYYELLSF 279

Query: 279 LPMSEIDRM-AKLQ-GKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM 336
            PMSEI  + A+++ G+   +AK ++A E+ T  H    A+ A           I    +
Sbjct: 280 RPMSEIAALKAEVEAGRNPKDAKVMLARELVTRFHSASAADAAEADFALRASGGI-PDDI 338

Query: 337 PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
           P + ++  E   G+ L   + +AG   ST E  R ++   ++I+ ++  +  L++     
Sbjct: 339 PEVRLALPE--GGLALPQALKQAGLVPSTAEGVRMIEQRGVRIDGTVAEDRTLKL----- 391

Query: 397 DSTGNIKLSFGKKN 410
              G + L  GK+ 
Sbjct: 392 -GAGTVVLQVGKRK 404


>gi|51892260|ref|YP_074951.1| tyrosyl-tRNA synthetase [Symbiobacterium thermophilum IAM 14863]
 gi|81389194|sp|Q67QD6|SYY_SYMTH RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|51855949|dbj|BAD40107.1| tyrosyl-tRNA synthetase [Symbiobacterium thermophilum IAM 14863]
          Length = 408

 Score =  100 bits (250), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 91/379 (24%), Positives = 172/379 (45%), Gaps = 29/379 (7%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D T   L  GH   L  L    + GH+ + ++G  T+++GDP+ R+E+R  +   E 
Sbjct: 46  LGIDPTGKDLTLGHTVPLRKLRDFVECGHQGVLIIGDYTAMVGDPTGRNEARPQLTHAET 105

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLN---NETWLCSIKYIDLLREIGSFFSVNRMLSF 156
             N ++       +++      D   L    N  WL  + + D++R + +  +V RML  
Sbjct: 106 TANAQR-------YLEQAARVLDVSKLEIRRNSEWLAPMSFSDVIR-LAAKSTVARMLER 157

Query: 157 ESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL 216
           E  + R +  + +   EF Y ++Q  D V +  +    +++GG+DQ  N++ G DL    
Sbjct: 158 EDFKKRYEEGRPIFIHEFFYPLMQGTDSVAVQAD----VELGGTDQKFNLLAGRDLQRDA 213

Query: 217 KTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKR 275
                  L +P++    G  KM K+L   I L+    +P   +    +I D+ ++++   
Sbjct: 214 GQEPQVCLMTPIVEGLDGVQKMSKSLGNYIGLDH---TPDEMFGRTMSIPDSLIITYFTY 270

Query: 276 LTTLPMSEIDRM--AKLQGKEINEAKKIIATEITTMVHGREEAEKAATAA-MECFDMSIH 332
            T +P  EI+R+  A   G+     KK +   I T   G EE  + A    +  F     
Sbjct: 271 FTDVPQEEIERIEAAMAAGENPMTFKKQLGRAIITTYGGTEEEARLAEERWVAQFSRGEV 330

Query: 333 SQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
            + +P + +   E+   M    ++  AG A S +EARR ++     ++   +++ + ++ 
Sbjct: 331 PEDIPDVVLPAAELP--MQAARVLFTAGLAPSLSEARRLIEQGGFTVDGEKVTDPRAELA 388

Query: 393 LQDFDSTGNIKLSFGKKNH 411
           L+     G + L  GK+ +
Sbjct: 389 LR----PGQV-LKAGKRKY 402


>gi|260222308|emb|CBA31742.1| Tyrosyl-tRNA synthetase [Curvibacter putative symbiont of Hydra
           magnipapillata]
          Length = 442

 Score =  100 bits (250), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 101/376 (26%), Positives = 169/376 (44%), Gaps = 28/376 (7%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  +  LQ  GH  I L+G  TS+IGDPS R+ +R  + +++I
Sbjct: 81  LGLDPTAPDIHIGHTVVLNKMRQLQDLGHTVIFLIGDFTSMIGDPSGRNSTRPPLTAEQI 140

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           + N E      S  +     KT+  +  N  W   +    ++ ++ S ++V RM+     
Sbjct: 141 KVNAETYYRQASLVLD--PAKTE--IRYNSEWSDPLGARGMI-QLASRYTVARMMERNDF 195

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R K    ++  EF Y ++Q YD V L    +  L++GG+DQ  N++ G  L       
Sbjct: 196 HDRFKAGTPIAVHEFLYPLMQGYDSVAL----ESDLELGGTDQKFNLLMGRTLQAEYGQE 251

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               LT PLL    G  KM K+ +  I +++E   P   +    +I D   V   K  T 
Sbjct: 252 PQCILTMPLLEGLDGVEKMSKSKNNYIGISEE---PNTMFAKVLSISD---VLMWKWYTL 305

Query: 279 LPMSEIDRMAKLQ-----GKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS 333
           L       +A L+     G+   +AK  +A EIT   H    A+ A    +      I  
Sbjct: 306 LSFKSEAEIAALKAEVEGGRNPKDAKVALAKEITARFHSAAAADAAEQDFINRSKGGIPD 365

Query: 334 QHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL 393
           Q +  I++   E    +G+  L+  A  A S+ E  R +    ++++++++S++ L++  
Sbjct: 366 Q-IDEITLPLGEGGAAVGIAALLKSANLAASSGEGNRLIDGGGVRVDSNVVSDKGLKL-- 422

Query: 394 QDFDSTGNIKLSFGKK 409
                 G   L  GK+
Sbjct: 423 ----GAGTYVLQVGKR 434


>gi|157374243|ref|YP_001472843.1| tyrosyl-tRNA synthetase [Shewanella sediminis HAW-EB3]
 gi|157316617|gb|ABV35715.1| Tyrosine--tRNA ligase [Shewanella sediminis HAW-EB3]
          Length = 398

 Score =  100 bits (250), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 97/366 (26%), Positives = 168/366 (45%), Gaps = 40/366 (10%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  +   Q+ GH+ I L+G  T ++GDPS ++ +R  +  +++
Sbjct: 38  LGADPTAPDIHLGHTVILNKMRTFQELGHEVIFLIGDFTGMVGDPSGKNSTRPPLTREQV 97

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
             N E  K      +     + +     N +WL  +    ++R + S  +V RM+  +  
Sbjct: 98  LANAETYKQQVYKILDPAKTRIEF----NSSWLEPLGAAGMIR-LASKQTVARMMERDDF 152

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
           + R    QS++  EF Y +LQ YD V L  +    +++GG+DQ  N++ G +L +     
Sbjct: 153 KKRYGSGQSIAIHEFMYPLLQGYDSVALKSD----VELGGTDQKFNLLMGRELQKSEGQK 208

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYN---------FWQYWRNIDDADV 269
               +  PLL    G  KM K+    I +++     +           W+Y+      ++
Sbjct: 209 PQTVIMMPLLEGLDGVKKMSKSAHNYIGVSEPAGEMFGKIMSISDELMWRYF------EL 262

Query: 270 VSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECF 327
           +SF       P+ EI++       G    + K  +A EI    H     E AA AA + F
Sbjct: 263 LSFR------PLGEIEQFKADVDAGANPRDIKIALAKEIIARFHD----EAAADAAHQEF 312

Query: 328 DMSIHSQHMPTISISKDEVSRGMG--LLTLIVKAGFATSTNEARRHLKSNAIKINNSIIS 385
                   +PT  I + E++ G G  +  L+ +AG   ST++A R +K  A KI+ + I 
Sbjct: 313 INRFQKGAIPT-DIQELEIAAGEGIAIANLLKEAGLVNSTSDAMRMIKQGAAKIDGTKIE 371

Query: 386 NEKLQI 391
           + +LQ+
Sbjct: 372 DTRLQL 377


>gi|297172808|gb|ADI23772.1| tyrosyl-tRNA synthetase [uncultured Oceanospirillales bacterium
           HF4000_43P14]
          Length = 399

 Score =  100 bits (250), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 79/282 (28%), Positives = 132/282 (46%), Gaps = 29/282 (10%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   +  L   Q+ GH  + L+G  T +IGDP+ +  +R  +  +EI+
Sbjct: 39  GFDPTAPDLHLGHTVLINKLRQFQELGHHVMFLIGDFTGMIGDPTGKSATRPPLTPEEIE 98

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
            N E  K     F      KT+ +   N TW+  +    +++ + S ++V RML  +   
Sbjct: 99  RNAETYKE--QVFKILDPEKTEVVF--NSTWMNQVGAAGMIK-LASQYTVARMLERDDFD 153

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R +  Q ++  EF Y ++Q YD V +    +  +++GG+DQ  N++ G  L +      
Sbjct: 154 KRYRANQPIAVHEFLYPLVQGYDSVAM----EADVELGGTDQKFNLLMGRTLQKAYGQAP 209

Query: 221 LFALTSPLLTTASGT-KMGKTLSGAIWLN--------KEMTSPYNF-WQYWRNIDDADVV 270
              LT P+L    G  KM K+L   + +N        K ++ P +  W+Y+  +      
Sbjct: 210 QICLTMPILEGLDGVQKMSKSLKNYVGVNDAPGEMYRKLLSIPDDMTWRYYELLSGLSNE 269

Query: 271 SFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHG 312
           +  +R      +E +R+   Q     EAKK  A E+ T  HG
Sbjct: 270 ALEER-----KAEAERLGSPQ-----EAKKAFALEMVTRFHG 301


>gi|296134576|ref|YP_003641818.1| tyrosyl-tRNA synthetase [Thiomonas intermedia K12]
 gi|295794698|gb|ADG29488.1| tyrosyl-tRNA synthetase [Thiomonas intermedia K12]
          Length = 411

 Score =  100 bits (250), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 97/374 (25%), Positives = 171/374 (45%), Gaps = 24/374 (6%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  L  LQ  GH  I L+G  TS IGDPS R+ +R  +  ++I
Sbjct: 52  LGLDPTAPDIHIGHTVVLNKLRQLQDLGHTVIFLIGDFTSRIGDPSGRNATRPPLTIEQI 111

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           + N +      S  +     KT+  +  N  W   +    ++R + + +++ R+L  +  
Sbjct: 112 KTNAQTYYAQASLVLD--PQKTE--IRYNSEWSEPLGADGMIR-LAAKYTLARLLERDDF 166

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R K    ++  E  Y ++Q +D V L  +    L++GG+DQ  N++ G +L       
Sbjct: 167 TKRFKEGVPIAMHELLYPLMQGFDSVALKSD----LELGGTDQKFNLLVGRELQREYGQE 222

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               LT PLL    G  KM K+    I + +   +P   +    +I D  +  + + L+ 
Sbjct: 223 PQCILTMPLLEGLDGVEKMSKSKGNYIGIQE---APATMFAKLLSISDVLMWRYFELLSF 279

Query: 279 LPMSEIDRM-AKLQ-GKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM 336
            PMSEI  + A+++ G+   +AK ++A E+ T  H    A+ A           I    +
Sbjct: 280 RPMSEIAALKAEVEAGRNPKDAKVMLARELVTRFHSASAADAAEADFALRASGGI-PDDI 338

Query: 337 PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
           P + ++  E   G+ L   + +AG   ST E  R ++   ++I+ ++  +  L++     
Sbjct: 339 PEVRLALPE--GGLALPQALKQAGLVPSTAEGVRMIEQRGVRIDGTVAEDRTLKL----- 391

Query: 397 DSTGNIKLSFGKKN 410
              G + L  GK+ 
Sbjct: 392 -GAGTVVLQVGKRK 404


>gi|325282260|ref|YP_004254801.1| Tyrosyl-tRNA synthetase [Deinococcus proteolyticus MRP]
 gi|324314069|gb|ADY25184.1| Tyrosyl-tRNA synthetase [Deinococcus proteolyticus MRP]
          Length = 414

 Score =  100 bits (249), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 93/377 (24%), Positives = 170/377 (45%), Gaps = 27/377 (7%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D T   LH GH   L  +   Q  GHK I L+G  T+ IGDP+ + ++R  +  +E 
Sbjct: 48  LGADPTRPDLHLGHAVILRKMRQFQDLGHKVIMLIGDFTATIGDPTGKSKTRPPLTIEEA 107

Query: 100 QEN----IEKIKGIFSSFIKYGTGKTDALML-NNETWLCSIKYIDLLREIGSFFSVNRML 154
           + N    +E+ + I  S       + + L + +N  WL  + Y D++  + + ++V R+L
Sbjct: 108 RANAQSYLEQCRLILRS-------EPEVLEIRSNGEWLEQLGYKDII-GLTAKYTVARIL 159

Query: 155 SFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
             +    RL     +S  E  Y + Q YD V L    +  +++GG+DQ  N + G  L  
Sbjct: 160 ERDDFSKRLSAGTPISMHELLYPLTQGYDSVAL----EADVELGGTDQLFNNLVGRALQR 215

Query: 215 RLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFA 273
                    +T PLL    GT KM K+L   I ++ E   P+  +     + D  + ++ 
Sbjct: 216 DYGQEPQVVMTLPLLVGLDGTEKMSKSLDNYIGISDE---PHAIFAGLMKVPDPLLANYF 272

Query: 274 KRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS 333
             LT LP   ID +  + G  + EA +++A E+   +    + + A           I  
Sbjct: 273 TLLTDLPQERIDEL--VAGHPV-EAHRVLAREVLVWLAPGADPDAAEERFRSVAKGGI-P 328

Query: 334 QHMPTISISKDEVSRG--MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
             +P + +   E++    + +  L+V AG   S   AR+ +++  +K++    ++ +  +
Sbjct: 329 DDLPEVVVDAAELNDEGRVSMARLVVLAGLEPSNGAARKLIQNRGLKVSGEAYTDAQGWV 388

Query: 392 KLQDFDSTGNIKLSFGK 408
           + +     G + L  GK
Sbjct: 389 EREQLCMEGGLILQKGK 405


>gi|330719863|gb|EGG98350.1| Tyrosyl-tRNA synthetase [gamma proteobacterium IMCC2047]
          Length = 342

 Score =  100 bits (249), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 84/322 (26%), Positives = 161/322 (50%), Gaps = 18/322 (5%)

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD 122
            Q  GH+ + L+G  T +IGDP+ ++ +R+ +  +++ EN +  K       K    +  
Sbjct: 4   FQDLGHEVLFLIGDFTGMIGDPTGKNVTRKPLTPEQVAENAKTYK---EQVFKILDPEKT 60

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
            ++ N+E W+  +   DL+ ++ +  SV RML  +  + R   +QS++  EF Y ++Q Y
Sbjct: 61  QVVFNSE-WMGKMNAADLI-QLAAQQSVARMLERDDFKKRYANQQSIAIHEFLYPMIQGY 118

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL-KTPKLFALTSPLLTTASGT-KMGKT 240
           D V L  +    L++GG+DQ  N++ G +L +   +TP++  +T P+L    G  KM K+
Sbjct: 119 DSVALKAD----LELGGTDQKFNLLMGRELQKHFGQTPQV-VMTLPILEGLDGVQKMSKS 173

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM-AKLQ-GKEINEA 298
           L+  I ++     P   ++   ++ D  +  + + L+  PMSEI++  A+++ G      
Sbjct: 174 LNNYIGVS---DMPGEMYRKIISMPDDLIWRYFELLSFRPMSEIEQFKAEVEAGANPQPV 230

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVK 358
           K  +A EI    HG+E AE A   A          + +P + ++    +  M +  ++  
Sbjct: 231 KVKLAEEIVERFHGKEAAENAHKGAGNTLRAGEIPEDLPEVEVATAGQAE-MPISAVLRM 289

Query: 359 AGFATSTNEARRHLKSNAIKIN 380
           A    ++N AR  L   A+ ++
Sbjct: 290 AKLVANSNAARDVLGRGAVYVD 311


>gi|127511955|ref|YP_001093152.1| tyrosyl-tRNA synthetase [Shewanella loihica PV-4]
 gi|126637250|gb|ABO22893.1| tyrosyl-tRNA synthetase [Shewanella loihica PV-4]
          Length = 398

 Score =  100 bits (249), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 91/362 (25%), Positives = 162/362 (44%), Gaps = 36/362 (9%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  +   Q+ GH+ I L+G  T ++GDPS ++ +R  +  +++
Sbjct: 38  LGADPTAPDIHLGHTVILNKMRAFQELGHEVIFLIGDFTGMVGDPSGKNSTRPPLTREQV 97

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
             N E  K      +     + +     N +WL  +    ++R + S  +V RM+  +  
Sbjct: 98  LANAETYKEQVYKILDPAKTRIEF----NSSWLEELGAAGMIR-LASQQTVARMMERDDF 152

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
           + R    QS++  EF Y +LQ YD V L    +  +++GG+DQ  N++ G +L +     
Sbjct: 153 KKRYASGQSIAIHEFMYPLLQGYDSVAL----EADVELGGTDQKFNLLMGRELQKAAGQK 208

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYN---------FWQYWRNIDDADV 269
               +  PLL    G  KM K+ +  I +++     +           W+Y+      ++
Sbjct: 209 PQAVIMMPLLEGLDGVKKMSKSANNYIGVSEPAGEMFGKIMSISDDLMWRYF------EL 262

Query: 270 VSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECF 327
           +SF       P+ EI ++      G    + K  +A EI    H    AE A    +  F
Sbjct: 263 LSFR------PLEEIAQLKSDVDNGTNPRDVKIALAKEIIARFHDEAAAEAAHQEFINRF 316

Query: 328 DMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNE 387
                   +  I I+  +   G+G+  ++  AG  +ST+EA R +K  A K++   I + 
Sbjct: 317 QKGAIPDDIQEIEIAAGD---GIGIANVLKDAGLVSSTSEAMRMIKQGAAKLDGDKIEDS 373

Query: 388 KL 389
           +L
Sbjct: 374 RL 375


>gi|212636577|ref|YP_002313102.1| tyrosyl-tRNA synthetase [Shewanella piezotolerans WP3]
 gi|212558061|gb|ACJ30515.1| Tyrosyl-tRNA synthetase, class Ib [Shewanella piezotolerans WP3]
          Length = 398

 Score =  100 bits (248), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 96/393 (24%), Positives = 177/393 (45%), Gaps = 45/393 (11%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           IL E   + ++   R L I          +G D TA  +H GH   L  +   Q+ GH+ 
Sbjct: 18  ILLEADLLEKLKEGRPLKI---------KLGADPTAPDIHLGHTVILNKMRTFQELGHEV 68

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           I L+G  T ++GDPS ++ +R  +  +++  N E  K      +     + +     N +
Sbjct: 69  IFLIGDFTGMVGDPSGKNSTRPPLTREQVLANAETYKEQVFKILDPAKTRIEF----NSS 124

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           WL  +    ++R + S  +V RM+  +  + R    Q+++  EF Y +LQ YD V L   
Sbjct: 125 WLEPLGAAGMIR-LASQQTVARMMERDDFKKRYGSGQAIAIHEFMYPLLQGYDSVAL--- 180

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNK 249
            +  +++GG+DQ  N++ G +L +         +  PLL    G  KM K+    I +++
Sbjct: 181 -ESDVELGGTDQKFNLLMGRELQKSSGQKPQTVIMMPLLEGLDGVKKMSKSAHNYIGVSE 239

Query: 250 EMTSPYN---------FWQYWRNIDDADVVSFAKRLTTLPMSEIDRM-AKLQ-GKEINEA 298
                +           W+Y+      +++SF       P++EI++  A ++ G    + 
Sbjct: 240 PAGEMFGKIMSISDELMWRYF------ELLSFR------PLAEIEQFKADIEAGANPRDV 287

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVK 358
           K  +A EI    H    A+ A    +  F        +  + I+  E   G+ +  L+ +
Sbjct: 288 KIALAKEIIARFHDEAAADAAHQEFINRFQKGALPSDIQELEIAAGE---GIAIANLLKE 344

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
           AG  +ST++A R +K  A KI+ + I + ++Q+
Sbjct: 345 AGLVSSTSDAMRMIKQGAAKIDGNKIEDTRMQL 377


>gi|124022271|ref|YP_001016578.1| tyrosyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9303]
 gi|123962557|gb|ABM77313.1| Tyrosyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9303]
          Length = 408

 Score =  100 bits (248), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 94/363 (25%), Positives = 160/363 (44%), Gaps = 33/363 (9%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D T   +H GH      L   Q  GH  + ++G  T+ IGDP+ +  +R  + S++I
Sbjct: 43  LGIDPTGRDIHLGHSILFRKLRAFQDAGHTAVLIIGDFTARIGDPTGKSSTRVQLTSEQI 102

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALM----------LNNETWLCSIKYIDLLREIGSFFS 149
           + N       + S +  G     AL+            N  WL  +   +++  +G+  +
Sbjct: 103 EAN----AATYLSQLGQGQSAEKALLDFTTPGRLEVRRNTEWLADLDLPEVIGLLGT-AT 157

Query: 150 VNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICG 209
           V +ML+ E   +R      ++  EF Y +LQ YD V +  +    +++GG+DQ  N+  G
Sbjct: 158 VGQMLAKEDFGNRYGSGIPIALHEFLYPLLQGYDSVAVQAD----VELGGTDQKFNVAMG 213

Query: 210 IDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDAD 268
            DL         F L  P+L    G  KM K+LS  + LN++   P + +     I DA 
Sbjct: 214 RDLQRHFDQRPQFGLLLPILAGLDGVQKMSKSLSNTVGLNED---PLSMYSKLEKIPDAL 270

Query: 269 VVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFD 328
           V S+   LT L    +    +       E +K +A  +T   HG   AE A   A     
Sbjct: 271 VSSYVVLLTDLDPEALPVNPR-------ERQKAMALAVTASRHGIAAAEAAQNDAARLVS 323

Query: 329 MSI-HSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNE 387
            S   +  +P   ++  +V+       L+   G   S++EARR +K  A++++   I++ 
Sbjct: 324 GSQDDAASVPEALLA--DVNFPAKAFYLLSAIGLCASSSEARRQIKGGAVRLDGEKITDP 381

Query: 388 KLQ 390
            L+
Sbjct: 382 NLE 384


>gi|255025009|ref|ZP_05296995.1| tyrosyl-tRNA synthetase [Listeria monocytogenes FSL J1-208]
          Length = 151

 Score =  100 bits (248), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 51/144 (35%), Positives = 78/144 (54%), Gaps = 1/144 (0%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG I+Q ++   L     +  ++ Y G D +  S+H GHL   M+L   Q  GH+PI
Sbjct: 7   LEWRGAIYQQTDEEGLRKWVDEKQISLYCGIDPSGDSMHIGHLIPFMILRRFQNAGHRPI 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+GG T  IGDPS + E R++   ++I +N+E ++        +  G + A M+NN  W
Sbjct: 67  ILVGGATGTIGDPSGKKEERKLQSMEQISKNVESLRVQLGKIFDF-EGDSAASMVNNYDW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLS 155
              +  +D LR+ G  F+VN MLS
Sbjct: 126 TKDVSILDFLRDYGKEFNVNTMLS 149


>gi|319761433|ref|YP_004125370.1| tyrosyl-tRNA synthetase [Alicycliphilus denitrificans BC]
 gi|330823297|ref|YP_004386600.1| tyrosyl-tRNA synthetase [Alicycliphilus denitrificans K601]
 gi|317115994|gb|ADU98482.1| tyrosyl-tRNA synthetase [Alicycliphilus denitrificans BC]
 gi|329308669|gb|AEB83084.1| tyrosyl-tRNA synthetase [Alicycliphilus denitrificans K601]
          Length = 410

 Score =  100 bits (248), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 97/341 (28%), Positives = 159/341 (46%), Gaps = 34/341 (9%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  +  LQ  GH+ I L+G  T++IGDPS R+ +R  + +++I
Sbjct: 53  LGLDPTAPDIHLGHTVVLNKMRQLQDLGHQVIFLIGDFTTLIGDPSGRNSTRPPLTAEQI 112

Query: 100 QENIE-------KIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNR 152
           + N E       K+     + I+Y +  +DAL                + E+ + ++V R
Sbjct: 113 KVNAETYYTQAAKVLDPARTEIRYNSEWSDALGARG------------MIELSAKYTVAR 160

Query: 153 MLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL 212
           M+       R     S+S  EF Y +LQ YD V L  +    L++GG+DQ  N++ G  L
Sbjct: 161 MMERNDFHQRFTDGSSISLHEFLYPLLQGYDSVALRSD----LELGGTDQKFNLLMGRHL 216

Query: 213 GERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVS 271
            +         LT PLL    G  KM K+ +  I + ++  +    +    +I DA +  
Sbjct: 217 QQEYGQEPQCVLTMPLLVGLDGVDKMSKSKNNYIGITEDANT---MFAKVLSISDALMWD 273

Query: 272 FAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDM 329
           +   L+   ++EI  + K    G+   +AK ++A EIT   H    A+ A          
Sbjct: 274 WYTLLSFKSLAEIAALKKEVEAGRNPKDAKVMLAKEITARFHSAAAADAAEQDFNNRSKG 333

Query: 330 SIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARR 370
            I  + +P +S+S       +G+  L+ +AG A ST+EA R
Sbjct: 334 GIPDE-IPELSLS----GAPLGIGALLKQAGLAPSTSEANR 369


>gi|126653939|ref|ZP_01725778.1| tyrosyl-tRNA synthetase [Bacillus sp. B14905]
 gi|126589542|gb|EAZ83683.1| tyrosyl-tRNA synthetase [Bacillus sp. B14905]
          Length = 393

 Score =  100 bits (248), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 94/381 (24%), Positives = 172/381 (45%), Gaps = 21/381 (5%)

Query: 32  SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESR 91
            Q  +T  +G D +A  +H GH   L  +  LQ  GH  + ++G  T  IGDP+ + + R
Sbjct: 24  EQKPLTIKLGLDPSAPDIHLGHAVVLRKIKQLQDLGHHAVIVIGDFTGRIGDPTGKSKGR 83

Query: 92  RMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVN 151
             +  + ++EN    K       K    +   +  N+E WL  + + +++ ++ +  SV 
Sbjct: 84  VALSDELVKEN---AKTYCEQIFKVLDEEKMTVRFNSE-WLAKLTFEEVI-QLAATTSVA 138

Query: 152 RMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGID 211
           R+L  E  + R   +  +   EF Y ++QAYD VEL  +    +++GG+DQ  NI+ G  
Sbjct: 139 RILEREDFQKRYHHQIPIGLHEFFYPLMQAYDSVELKAD----IELGGTDQTFNILMGRT 194

Query: 212 LGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVV 270
           L       K  A+  PLL    G  KM K+L   I +++   +P   ++    + D+ ++
Sbjct: 195 LQRHRGLEKQIAIFMPLLEGLDGIEKMSKSLGNYIGVHE---APEVMFKKIMELPDSLII 251

Query: 271 SFAKRLT-TLPMSEIDRMAKLQ-GKEINEAKKIIATEITTMVHGREEAEKAATAAMECFD 328
            + +  T   P+       +LQ G+   + K  +A  +T + HG      A +     F 
Sbjct: 252 KYFELATDEHPLQVQAVQERLQNGENPRDIKLQLAEIVTALYHGHAATMDAKSYFEAAFQ 311

Query: 329 MSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEK 388
             +   ++P + +  D+  R   ++  ++   F  S ++  R +K N + +N   I+ + 
Sbjct: 312 KKMIPANIPVLLLEIDK-ERIEDIIPQLISIQFIQSKSDFIRLIKQNGVSLNGEKIAVDD 370

Query: 389 LQIKLQDFDSTGNIKLSFGKK 409
           L   L + D      L  GKK
Sbjct: 371 LSQVLMNEDV-----LQIGKK 386


>gi|115305815|sp|Q7TUT0|SYY_PROMM RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
          Length = 415

 Score =  100 bits (248), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 93/363 (25%), Positives = 160/363 (44%), Gaps = 33/363 (9%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D T   +H GH      L   Q  GH  + ++G  T+ IGDP+ +  +R  + S++I
Sbjct: 50  LGIDPTGRDIHLGHSILFRKLRAFQDAGHTAVLIIGDFTARIGDPTGKSSTRVQLTSEQI 109

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALM----------LNNETWLCSIKYIDLLREIGSFFS 149
           + N       + + +  G     AL+            N  WL  +   +++  +G+  +
Sbjct: 110 EANAT----TYLAQLGQGQSAEKALLDFTTPGRLEVRRNTEWLADLDLPEVIGLLGT-AT 164

Query: 150 VNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICG 209
           V +ML+ E   +R      ++  EF Y +LQ YD V +  +    +++GG+DQ  N+  G
Sbjct: 165 VGQMLAKEDFGNRYGSGVPIALHEFLYPLLQGYDSVAVQAD----VELGGTDQKFNVAMG 220

Query: 210 IDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDAD 268
            DL         F L  P+L    G  KM K+LS  + LN++   P + +     + DA 
Sbjct: 221 RDLQRHFDQRPQFGLLLPILAGLDGVQKMSKSLSNTVGLNED---PLSMYSKLEKVPDAL 277

Query: 269 VVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFD 328
           V S+   LT L    +    +       E +K +A  +T   HG   AE A   A     
Sbjct: 278 VSSYVVLLTDLDPEALPVNPR-------ERQKAMAIAVTASRHGIAAAEAAQNDAARLVS 330

Query: 329 MSI-HSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNE 387
            S   +  +P   +S  +V+       L+   G   S++EARR +K  A++++   I++ 
Sbjct: 331 GSQDDAASVPEAFLS--DVNFPAKAFYLLSAIGLCASSSEARRQIKGGAVRLDGEKITDP 388

Query: 388 KLQ 390
            L+
Sbjct: 389 NLE 391


>gi|115378697|ref|ZP_01465845.1| tyrosyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
 gi|310822372|ref|YP_003954730.1| tyrosyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
 gi|115364283|gb|EAU63370.1| tyrosyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
 gi|309395444|gb|ADO72903.1| Tyrosyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
          Length = 420

 Score =  100 bits (248), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 90/367 (24%), Positives = 167/367 (45%), Gaps = 32/367 (8%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D     LH GH   L  +   Q  GH  + L+G  T++IGDP+ ++ +R  +  +E++
Sbjct: 50  GFDPNRPDLHLGHSLLLTRMRRFQDFGHTVVFLIGDFTALIGDPTGKNVTRPPLSREEVK 109

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
            N E  K       K    +   +  N+E WL ++    ++R + + +SV RML  +  +
Sbjct: 110 ANAETYK---QQVFKVLHAERTVVRFNSE-WLDALGTEGMIR-LAARYSVQRMLERDDFK 164

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R +  +S++  EF Y +LQ YD V L  +    +++G +DQ  N++ G  L +      
Sbjct: 165 KRFRDNRSIALHEFLYPLLQGYDSVALKAD----VELGATDQLFNLLVGRQLMKEQGMEP 220

Query: 221 LFALTSPLLT---------TASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVS 271
              +T P+L            +G KM K+L   + +N+        +    +I D  +  
Sbjct: 221 QVIMTGPILEGLDAKLVDGKITGEKMSKSLDNYVGINEPAE---QIFGKLMSITDDLMWR 277

Query: 272 FAKRLTTLPMSEIDRM-AKLQ-GKEINEAKKI-IATEITTMVHGREEAEKAATAAMECFD 328
           + + L+  P+ EI  + A ++ G+   +A K+  A EI +   G E   +AA    E F+
Sbjct: 278 YYELLSARPLKEIQALKASVESGQSHPKAAKVAFAQEIASRFQGDEAGRRAA----EDFE 333

Query: 329 MSIHSQHMPTISISKDEVSRGMGLLTLIVKA----GFATSTNEARRHLKSNAIKINNSII 384
               ++ + T S+   EV        L+ K         S+ EAR+ +    ++I    +
Sbjct: 334 ARFKNKQLDTESLPLVEVPMEGAAKLLVTKVLPETKLVASSTEARKLMAQGGVRIAGEKV 393

Query: 385 SNEKLQI 391
           ++ K ++
Sbjct: 394 TDPKAEL 400


>gi|124268334|ref|YP_001022338.1| tyrosyl-tRNA synthetase [Methylibium petroleiphilum PM1]
 gi|124261109|gb|ABM96103.1| tyrosyl-tRNA synthetase [Methylibium petroleiphilum PM1]
          Length = 424

 Score = 99.8 bits (247), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 94/364 (25%), Positives = 168/364 (46%), Gaps = 36/364 (9%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  +  LQ  GH+ I L+G  TS+IGDPS R+ +R  +  ++I
Sbjct: 67  LGLDPTAPDIHLGHTVVLNKMRQLQDLGHQVIFLIGDFTSMIGDPSGRNATRPPLTREQI 126

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           + N +      S  +     KT+  +  N  W   +    ++ ++ S +++ RM+  +  
Sbjct: 127 ESNAQTYYRQASLVLD--PSKTE--IRYNSEWSDPLGARGMI-QLASRYTIARMMERDDF 181

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R K    +S  EF Y ++Q YD V L  +    L++GG+DQ  N++ G  L       
Sbjct: 182 TKRFKAGVPISVHEFLYPLMQGYDSVALKSD----LELGGTDQKFNLLVGRQLQAEYGQE 237

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYN---------FWQYWRNIDDADV 269
               LT PLL    G  KM K+ +  I + +   S +           W+Y+       +
Sbjct: 238 PQCILTMPLLEGLDGVEKMSKSKNNYIGITEPANSMFAKMLSISDALMWKYFT------L 291

Query: 270 VSFAKRLTTLPM-SEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFD 328
           +SF        + +E+D      G+   +AK ++A E+TT  H    AE A         
Sbjct: 292 LSFRSEAEIAALKAEVD-----AGRNPKDAKVLLAKEVTTRFHDAAAAEAAEADFQNRAK 346

Query: 329 MSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEK 388
             +  + +P ++++       +G+ TL+ +A   TS +E  R ++   ++I+   IS++ 
Sbjct: 347 GGVPDE-LPDVALA----GAPLGIGTLLKQANLVTSGSEGLRMVEQGGVRIDGVAISDKG 401

Query: 389 LQIK 392
           L+++
Sbjct: 402 LKLE 405


>gi|33863670|ref|NP_895230.1| tyrosyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9313]
 gi|33635253|emb|CAE21578.1| t-RNA synthetase, class Ib:Tyrosyl-tRNA synthetase [Prochlorococcus
           marinus str. MIT 9313]
          Length = 408

 Score = 99.8 bits (247), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 93/363 (25%), Positives = 160/363 (44%), Gaps = 33/363 (9%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D T   +H GH      L   Q  GH  + ++G  T+ IGDP+ +  +R  + S++I
Sbjct: 43  LGIDPTGRDIHLGHSILFRKLRAFQDAGHTAVLIIGDFTARIGDPTGKSSTRVQLTSEQI 102

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALM----------LNNETWLCSIKYIDLLREIGSFFS 149
           + N       + + +  G     AL+            N  WL  +   +++  +G+  +
Sbjct: 103 EANAT----TYLAQLGQGQSAEKALLDFTTPGRLEVRRNTEWLADLDLPEVIGLLGT-AT 157

Query: 150 VNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICG 209
           V +ML+ E   +R      ++  EF Y +LQ YD V +  +    +++GG+DQ  N+  G
Sbjct: 158 VGQMLAKEDFGNRYGSGVPIALHEFLYPLLQGYDSVAVQAD----VELGGTDQKFNVAMG 213

Query: 210 IDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDAD 268
            DL         F L  P+L    G  KM K+LS  + LN++   P + +     + DA 
Sbjct: 214 RDLQRHFDQRPQFGLLLPILAGLDGVQKMSKSLSNTVGLNED---PLSMYSKLEKVPDAL 270

Query: 269 VVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFD 328
           V S+   LT L    +    +       E +K +A  +T   HG   AE A   A     
Sbjct: 271 VSSYVVLLTDLDPEALPVNPR-------ERQKAMAIAVTASRHGIAAAEAAQNDAARLVS 323

Query: 329 MSI-HSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNE 387
            S   +  +P   +S  +V+       L+   G   S++EARR +K  A++++   I++ 
Sbjct: 324 GSQDDAASVPEAFLS--DVNFPAKAFYLLSAIGLCASSSEARRQIKGGAVRLDGEKITDP 381

Query: 388 KLQ 390
            L+
Sbjct: 382 NLE 384


>gi|150017276|ref|YP_001309530.1| tyrosyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052]
 gi|149903741|gb|ABR34574.1| tyrosyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052]
          Length = 403

 Score = 99.8 bits (247), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 91/351 (25%), Positives = 161/351 (45%), Gaps = 18/351 (5%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  +  +Q  GH+ + ++G  T  IGDP+ + ++R+ +  +E+
Sbjct: 43  LGLDPTAPDIHLGHAVVLRKIKQMQDLGHRAVIIIGDFTGKIGDPTGKSKTRKPLTKEEV 102

Query: 100 QEN-IEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
            EN +   K IF    +  T     +  N+E WL  + + ++L+ + +  +V RML  E 
Sbjct: 103 VENALTYQKQIFKILDRDKT----EIKFNSE-WLSELSFEEVLK-LAATTTVARMLERED 156

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
            + R      +   EF Y ++Q YD + L       +++GG+DQ  NI+ G  L +    
Sbjct: 157 FKKRYNSNTPIGIHEFFYPLMQGYDSIALK----ADIELGGTDQTFNILMGRTLQKNAGM 212

Query: 219 PKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT 277
            +  A+  P+L    G  KM K+L   I + +   S    ++    I D  ++ + +  T
Sbjct: 213 EQQTAIFMPILEGLDGKEKMSKSLGNYIGIQE---SAEIMFKKVMEIPDDLIIKYYELAT 269

Query: 278 TLPMSEIDRMAKL--QGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQH 335
                +I  + +    GK   + K  +A  IT + H  EE++ A       F        
Sbjct: 270 DEHPDKIRGIKEELDNGKNPRDVKFELAKIITRLYHAEEESKFALEYFENVFKNKNIPDE 329

Query: 336 MPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISN 386
           +P I+IS  E S    +  ++VK+    S NE +R L    + +N   +S+
Sbjct: 330 VPEINIS-SECSLLEDVGKVLVKSNLIKSYNEFKRLLSQGGVYVNMQKVSD 379


>gi|297183455|gb|ADI19587.1| tyrosyl-tRNA synthetase [uncultured Acidobacteria bacterium
           HF0770_27F21]
          Length = 407

 Score = 99.4 bits (246), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 93/357 (26%), Positives = 166/357 (46%), Gaps = 21/357 (5%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G+D +A+ +H GH   +  +   Q  GH+ + ++G  T++IGDPS +  +R  +   E+
Sbjct: 45  VGFDPSAADIHLGHTVVIRKMKQFQDLGHQVVFVVGDFTAMIGDPSGKSATRPQLTRGEV 104

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           +EN E  +    +F    + K+   +  N TWL  +     + E+   ++V RML  +  
Sbjct: 105 RENAETYRQ--QAFKILSSDKS--RLEFNSTWLEDLGAGGFI-ELAGKYTVARMLERDDF 159

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R    Q +   E  Y + QAYD V L    +  ++MGG+DQ  N++ G  +       
Sbjct: 160 EKRFNNNQPIGVHELLYPLAQAYDSVVL----EADVEMGGTDQLFNLLVGRSIMREYGQE 215

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               LT PLL    G  KM K+L   I +     +P   +    +I D  + S+ +  T+
Sbjct: 216 PQAVLTLPLLVGTDGVEKMSKSLGNYIAVED---TPKEMFGKVMSISDELMWSYYELCTS 272

Query: 279 LPMSEIDRMAKLQGK---EINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQH 335
           LP  +I+ +    G        AK+ ++  I    H     E+AA  A+E FD       
Sbjct: 273 LPAEQIEVIRSQVGSGDLHPKAAKQRLSRIIVADFH----GEEAAAGALEEFDNIFREGG 328

Query: 336 MP-TISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
           +P  I+    + +    ++ ++ + GFA+S  EARR L   A+ ++   I++++  +
Sbjct: 329 LPDDITGHGFDGAEPAWIIQVMRECGFASSNGEARRLLAQGAVSLDGERITSDEAMV 385


>gi|297171004|gb|ADI22019.1| tyrosyl-tRNA synthetase [uncultured myxobacterium HF0200_01L06]
          Length = 408

 Score = 99.4 bits (246), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 94/378 (24%), Positives = 167/378 (44%), Gaps = 29/378 (7%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D ++  LH GH   L  L   Q+ GH PI L+G  T+ IGDPS + ++R  +  +E+
Sbjct: 46  LGMDPSSPDLHLGHAVVLEKLRIFQELGHTPIFLIGDFTARIGDPSGKKKTRPPLGDKEV 105

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
             N        S   K        +  N+E W+ ++   D +R + S  +V+R+L  +  
Sbjct: 106 TANAAT---YVSQVAKMLDADAAEIRFNSE-WMDAMTPQDFVR-LCSHTTVSRLLERDDF 160

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R   +  ++  EF Y  +QAYD V L    +  +++GG+DQ  N++ G ++       
Sbjct: 161 SKRYAAQTPIAVHEFLYPFVQAYDSVAL----EADVELGGTDQTFNLLMGREIQRAYGKA 216

Query: 220 KLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               +T PLL    G  KM K+L  +I L   +  P   +    +I DA +  +   +  
Sbjct: 217 PQAVITHPLLVGTDGHEKMSKSLGNSIAL---LDPPEEIYGKIMSISDALLPDY---VAM 270

Query: 279 LPMSEIDRMAKLQGKEINEAKKIIAT--EITTMVHGREEAEKAATAAMECFDMSIHSQHM 336
           LP+   + +       ++ A   +A   E+   V  R     ++  A + F   +  +  
Sbjct: 271 LPIPRNEELLSASKAVVSGAGDPLALKHELARRVVERFYDAGSSEGAADHFRRVVQERGK 330

Query: 337 PTISISKDEVS----RGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
           PT  +++ E S      + LL L+   G A S  E RR +   A+ +++  +S+  L + 
Sbjct: 331 PT-EVAQYEYSLAGAETVSLLDLVDHLGLAGSRGELRRLVSQGAVSVDDERVSDPLLAL- 388

Query: 393 LQDFDSTGNIKLSFGKKN 410
                  G+  L  G++ 
Sbjct: 389 -----GAGSYLLKLGRRR 401


>gi|121593058|ref|YP_984954.1| tyrosyl-tRNA synthetase [Acidovorax sp. JS42]
 gi|120605138|gb|ABM40878.1| tyrosyl-tRNA synthetase [Acidovorax sp. JS42]
          Length = 410

 Score = 99.4 bits (246), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 94/342 (27%), Positives = 156/342 (45%), Gaps = 36/342 (10%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  +  LQ  GH+ I L+G  T++IGDPS R+ +R  + +++I
Sbjct: 53  LGLDPTAPDIHLGHTVVLNKMRQLQDLGHQVIFLIGDFTTLIGDPSGRNSTRPPLTAEQI 112

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           + N    K  ++   K        +  N+E W   +    ++ ++ + ++V RM+     
Sbjct: 113 KVN---AKTYYTQAAKVLDPARTEIRYNSE-WCDQLGARGMI-QLSAKYTVARMMERNDF 167

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R     S+S  EF Y +LQ YD V L  +    L++GG+DQ  N++ G  L +     
Sbjct: 168 HQRFTDGSSISLHEFLYPLLQGYDSVALRSD----LELGGTDQKFNLLMGRHLQQEWGQE 223

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRL-- 276
               LT PLL    G  KM K+ +  I + ++  S +           A V+S +  L  
Sbjct: 224 PQCVLTMPLLVGLDGVDKMSKSKNNYIGITEDANSMF-----------AKVLSISDTLMW 272

Query: 277 ---TTLPMSEIDRMAKLQ-----GKEINEAKKIIATEITTMVHGREEAEKAATAAMECFD 328
              T L    +D +A L+     G+   +AK ++A EIT   H    A+ A    +    
Sbjct: 273 DWYTLLSFKSLDEIAALKAEVAAGRNPKDAKVMLAKEITARFHSAALADAAEQDFINRSK 332

Query: 329 MSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARR 370
             I    +P + ++       +G+  L+ +A  A ST+EA R
Sbjct: 333 GGI-PDDIPEVRLA----GAPLGIGALLKQANLAPSTSEANR 369


>gi|196230468|ref|ZP_03129330.1| tyrosyl-tRNA synthetase [Chthoniobacter flavus Ellin428]
 gi|196225398|gb|EDY19906.1| tyrosyl-tRNA synthetase [Chthoniobacter flavus Ellin428]
          Length = 390

 Score = 99.4 bits (246), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 90/364 (24%), Positives = 164/364 (45%), Gaps = 48/364 (13%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H G    L  L   Q  GH+ I ++G  T++IGDPS R ++R  +   ++
Sbjct: 38  LGVDPTAPDIHLGFTVALTKLRQFQDLGHQAILIIGDFTAMIGDPSGRSKARPQLTHDQV 97

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
             N    +      +     +T    + N  W   + + ++++ +    ++ +ML  E  
Sbjct: 98  MNNARSFQEQAYKILDPERTRT----VFNGQWFEMMTFEEVIK-LNGRVTLQQMLQREDF 152

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
           ++RL+R  ++   E  Y I+Q +D V +  +    +++GG+DQ  NI+ G DL      P
Sbjct: 153 KNRLERGDAVHLHEIQYPIMQGWDSVVVKAD----VEIGGTDQLFNILVGRDLQREEGQP 208

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
           +      PLL    G  KM K+L   + +++   +P   +    +I D  +  +   L  
Sbjct: 209 QQIVFLMPLLEGLDGVQKMSKSLGNYVGVSE---APTEMFGKLMSITDTLMARYYLLLLG 265

Query: 279 LPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDM-----SIHS 333
             + +I  M         +AKK +A  I    HG    E+A  AA+E F+       + +
Sbjct: 266 EDVPDIHPM---------DAKKQLARRIVARYHG----EEAGNAALEDFNTKFSKRDVEN 312

Query: 334 QHMPTIS---ISKDEVSRGMGLLTLIVKAGF------ATSTNEARRHLKSNAIKINNSII 384
              P +    +++D VS        IV AG+      A S  +ARR ++  +I+++   I
Sbjct: 313 AEWPVVDFAGVNQDIVS--------IVVAGYEKGYQIAKSRGDARRLVEQGSIQLHEEKI 364

Query: 385 SNEK 388
           ++ K
Sbjct: 365 TDPK 368


>gi|50083309|ref|YP_044819.1| tyrosyl-tRNA synthetase [Acinetobacter sp. ADP1]
 gi|81394066|sp|Q6FG10|SYY_ACIAD RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|49529285|emb|CAG66997.1| tyrosyl-tRNA synthetase [Acinetobacter sp. ADP1]
          Length = 404

 Score = 99.0 bits (245), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 92/379 (24%), Positives = 168/379 (44%), Gaps = 28/379 (7%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           I+SE   + ++   R L I           G+D TA  LH GH   +  L   Q  GH+ 
Sbjct: 21  IISEEDLLKKLKENRPLRIKA---------GFDPTAPDLHLGHTVLINKLKAFQDLGHEV 71

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
             L+G  T++IGDP+ +  +R  +  ++++ N +  +       K        +  N+E 
Sbjct: 72  TFLIGDYTAMIGDPTGKSATRPPLTREQVEANAKTYQ---EQVFKILDPNKTKVRFNSE- 127

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           W       DL+ ++ S  +V+RML  +    R    Q ++  EF Y ++Q YD + L   
Sbjct: 128 WFNQRTAADLI-QLASQQTVSRMLERDDFTKRYNNHQPIAIHEFLYPLVQGYDSIAL--- 183

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNK 249
            +  +++GG+DQ  N++ G  L  R        +T P+L    G  KM K+L   I +  
Sbjct: 184 -EADVELGGTDQTFNLLMGRTLQGRYGQESQVCITVPILEGLDGVNKMSKSLGNYIGV-- 240

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI----DRMAKLQGKEINEAKKIIATE 305
              +P   +Q   ++ D  +  + + L+   + EI    D MA   G+   + KKI+A E
Sbjct: 241 -FDAPGAMYQKVLSMPDTLIERYFELLSFKSLDEIQGLLDEMAN--GRNPQDLKKILALE 297

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           +    H  + A  A   A          +  P ++IS+ E    + + +++  AG   + 
Sbjct: 298 LVERFHDADAAANAHKGAGNIITEGEIPEGTPEVTISRGEFGGEIFIASIVRLAGLTKNA 357

Query: 366 NEARRHLKSNAIKINNSII 384
            +A+  +   A+K++  ++
Sbjct: 358 AQAKDAVSRGAVKVDWQVV 376


>gi|296122444|ref|YP_003630222.1| tyrosyl-tRNA synthetase [Planctomyces limnophilus DSM 3776]
 gi|296014784|gb|ADG68023.1| tyrosyl-tRNA synthetase [Planctomyces limnophilus DSM 3776]
          Length = 414

 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 91/380 (23%), Positives = 175/380 (46%), Gaps = 33/380 (8%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESR-RMMRSQEI 99
           G D T   +H GH   L  L   Q+ GH+ + ++G  T+++GDPS RD++R + + ++E+
Sbjct: 52  GIDPTGIDVHLGHTVPLRKLRQFQELGHQAVLIIGNFTAMVGDPSGRDQARAKRLSAEEV 111

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           + N           I     KT+  +  N  W   + + D+L  + S  +V ++L+ +  
Sbjct: 112 EANATDYLKQVGKVIDL--SKTE--IHRNGEWFSKMTFADIL-TLCSKVTVAQLLTRDDF 166

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R   +  +   E  Y ++QA+D VE+  +    +++GG++Q  + +   DL    +  
Sbjct: 167 AKRYASQSPIFLHECLYPVMQAWDSVEIKSD----IELGGTEQLYSFMLARDLQRDQQLE 222

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
           +   + SP+L    G  +MGK+L   I + +   SP    + +  I D  +  + + LT 
Sbjct: 223 QQLGVMSPILVGLDGKRRMGKSLGNYIGIAE---SPLAMMKKFMQIPDEVMPMYFELLTN 279

Query: 279 LPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPT 338
           +P+ E+ ++  L G     AK+ +A E+    H       A   A++ ++  + +  +P 
Sbjct: 280 IPLDEVQQL--LAGHP-KLAKQRLAREVIAQYH----TSTAGDEAIQQWEAEVSAGALPA 332

Query: 339 ----ISISKDEVSRGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINN--SIISNEKLQI 391
               ++I    VS G     ++ K AG   +T++ARR +        +   +IS+    I
Sbjct: 333 DIEQVTIEASVVSNGTVTAAILFKQAGLCPTTSDARRLISQGGAYFGDDLQVISSHDQAI 392

Query: 392 KLQDFDSTGNIKLSFGKKNH 411
            +     T  + L  GKK +
Sbjct: 393 PI-----TNGLLLKAGKKRY 407


>gi|117620349|ref|YP_857617.1| tyrosyl-tRNA synthetase [Aeromonas hydrophila subsp. hydrophila
           ATCC 7966]
 gi|117561756|gb|ABK38704.1| tyrosyl-tRNA synthetase [Aeromonas hydrophila subsp. hydrophila
           ATCC 7966]
          Length = 399

 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 93/356 (26%), Positives = 167/356 (46%), Gaps = 18/356 (5%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  L   Q  GH+ I L+G  T+++GDPS ++ +R  +  + I
Sbjct: 38  LGMDPTAPDIHLGHTVILNKLKTFQDLGHEVILLIGDFTAMVGDPSGKNATRPPLSEEAI 97

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           + N   +     +F      KT   +  N TWL  +    +++ + +  +V RM+  +  
Sbjct: 98  KHN--ALTYAEQAFKILDPAKTR--IEYNSTWLSELGATGMIK-LAAKQTVARMMERDDF 152

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
           + R    QS++  EF Y +LQ YD V L  +    +++GG+DQ  N++ G +L +     
Sbjct: 153 KKRYSNGQSIAIHEFLYPLLQGYDSVALKAD----VELGGTDQKFNLLMGRELQKDAGMA 208

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               L  PLL    G  KM K+ +  I ++    +P   +    +I D  + ++ + L+ 
Sbjct: 209 TQCVLMMPLLVGLDGVKKMSKSAANYIGVH---DAPGEMFGKIMSITDDLMWNYYELLSF 265

Query: 279 LPMSEIDRM-AKLQGKEIN--EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQH 335
            P++EI+   A +    +N  + K  +A EI    H    AE A     + F  +     
Sbjct: 266 RPLAEIEEFKAGIAAGTLNPRDVKIWLAKEIIARYHDEAAAEAAHEDFTQRFSKNAIPDE 325

Query: 336 MPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
           MP + ++ +    G+ +  L+  A    +T+EA R +K  A+K++   + + K  I
Sbjct: 326 MPEVELALE--GEGLAIANLLKDADLVATTSEALRMIKQGAVKVDGEKLEDGKALI 379


>gi|87301176|ref|ZP_01084017.1| tyrosyl-tRNA synthetase [Synechococcus sp. WH 5701]
 gi|87284144|gb|EAQ76097.1| tyrosyl-tRNA synthetase [Synechococcus sp. WH 5701]
          Length = 411

 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 101/394 (25%), Positives = 164/394 (41%), Gaps = 54/394 (13%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D T S +H GH      L   Q  GH  + ++G  T+ IGDPS R  +R  + + E+
Sbjct: 47  LGIDPTGSDIHLGHSILFRKLRAFQDAGHTAVLIIGDFTARIGDPSGRSATRVQLSAAEV 106

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALML------------NNETWLCSIKYIDLLREIGSF 147
           + N +      +  ++ G G+     L             N  WL  +    ++  +G+ 
Sbjct: 107 EANAD------TYLVQLGLGQPPEQSLLDFTTPGRLEVRRNSEWLAGLDLPQVIELLGT- 159

Query: 148 FSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNII 207
            +V +ML+ E   +R      +S  EF Y +LQ YD V +A +    L++GG+DQ  N+ 
Sbjct: 160 STVGQMLAKEEFANRYGSGTPISLHEFLYPLLQGYDSVAVASD----LELGGTDQKFNVA 215

Query: 208 CGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDD 266
            G DL         F L  P+L    G  KM K+L   + L +    P   +     + D
Sbjct: 216 MGRDLQRHFGQRPQFGLLLPILPGLDGVQKMSKSLGNTVGLKE---GPLAMYSKLEKVPD 272

Query: 267 ADVVSFAKRLTTL-----PMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAAT 321
           A    +   LT L     P S  +R            +K +A  IT   HG E A  A  
Sbjct: 273 AVAEQYLTLLTDLDPDHWPTSPRER------------QKALALAITAARHGLEAASAAQA 320

Query: 322 AAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINN 381
            A       + +Q +P  S++   V+       L+   G   S++EARR ++   ++++ 
Sbjct: 321 DAANLVAGEMAAQTVPETSLAP--VTFPAKAFHLLSALGLCASSSEARRQIQGGGVRLD- 377

Query: 382 SIISNEKLQIKLQDFDSTGNIK---LSFGKKNHI 412
                EKL    + F +   ++   L  GKK  +
Sbjct: 378 ----GEKLTDVNRSFSAASELEGRVLQLGKKTFL 407


>gi|284044994|ref|YP_003395334.1| tyrosyl-tRNA synthetase [Conexibacter woesei DSM 14684]
 gi|283949215|gb|ADB51959.1| tyrosyl-tRNA synthetase [Conexibacter woesei DSM 14684]
          Length = 398

 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 103/398 (25%), Positives = 172/398 (43%), Gaps = 48/398 (12%)

Query: 25  RELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGD 83
           R+L++   +G  +   +G D TA  +H G    L  L   Q  GH  + ++G  T+ +GD
Sbjct: 30  RKLELAAREGRPLRVKLGIDPTAPDIHLGFTVVLGKLREFQDLGHTVVLIIGDYTARVGD 89

Query: 84  PSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN---NETWLCSIKYIDL 140
           PS R  +R M+  ++I  N        ++F +      D   L    N  WL      D 
Sbjct: 90  PSGRSSTRPMLSGEQIDANA-------TTFQQQALKVLDPARLEVRRNGEWLD--MRTDE 140

Query: 141 LREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGS 200
           L  +    +V R+L  +    R      +S LE  Y +LQ YD V +    D  +++GG+
Sbjct: 141 LFGLVRTTTVARILERDDFSKRYAARAPISILELLYPLLQGYDSVAV----DADVELGGT 196

Query: 201 DQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQ 259
           DQ  N++ G D+       +   LT P+L    G  KM K+L   I + +    P   + 
Sbjct: 197 DQKFNLLLGRDIQTAYGRSEQVILTMPILPGIDGERKMSKSLGNYIGVTE---PPEEIYG 253

Query: 260 YWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKA 319
               + D  + ++ + L   P+          G    +AK+ +A  +    H     + A
Sbjct: 254 KTLRLPDEALPTWYELLLGEPVP--------AGAPPRDAKRALARRLVARFHD----DAA 301

Query: 320 ATAAMECFDMSIHSQH-----MPTISISKDEVSRGMGLLTL--IVKAGFATSTNEARRHL 372
           A AA   FD  +H +H     MP  ++  D    G G++ L  ++ A F  S++EARR L
Sbjct: 302 AEAAERAFD-RVHVEHRPPEEMPDAALPVD----GAGVVHLPALLAAAFGVSSSEARRQL 356

Query: 373 KSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
           K   +K++   ++ + L     + D  G + L  GK+ 
Sbjct: 357 KQGGVKLDGDPLAADPLDRPAAELD--GRV-LQLGKRR 391


>gi|330830717|ref|YP_004393669.1| Tyrosyl-tRNA synthetase 2 [Aeromonas veronii B565]
 gi|328805853|gb|AEB51052.1| Tyrosyl-tRNA synthetase 2 [Aeromonas veronii B565]
          Length = 399

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 94/356 (26%), Positives = 167/356 (46%), Gaps = 18/356 (5%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  L   Q  GH+ I L+G  T+++GDPS ++ +R  +  + I
Sbjct: 38  LGMDPTAPDIHLGHTVILNKLKTFQDLGHEVILLIGDFTAMVGDPSGKNATRPPLSEEAI 97

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           + N   +     +F      KT   +  N TWL  +    +++ + +  +V RM+  +  
Sbjct: 98  KHN--ALTYAEQAFKILDPAKTR--IEYNSTWLSELGATGMIK-LAAKQTVARMMERDDF 152

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
           + R    QS++  EF Y +LQ YD V L  +    +++GG+DQ  N++ G +L +     
Sbjct: 153 KKRYTGGQSIAIHEFLYPLLQGYDSVALKAD----VELGGTDQKFNLLMGRELQKDAGMA 208

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               L  PLL    G  KM K+    I ++    +P   +    +I D  + ++ + L+ 
Sbjct: 209 TQCVLMMPLLVGLDGVKKMSKSAGNYIGVH---DAPGEMFGKIMSITDDLMWNYYELLSF 265

Query: 279 LPMSEIDRM-AKLQGKEIN--EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQH 335
            P++EI+   A +    +N  + K  +A EI    H    AE A     + F  +     
Sbjct: 266 RPLAEIEEFKAGIAAGTLNPRDVKIWLAKEIIARYHDEAAAEAAHEDFTQRFSKNAIPDE 325

Query: 336 MPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
           MP I ++ +    G+ +  L+ +A    +T+EA R +K  A+K++   + + K  I
Sbjct: 326 MPEIELALE--GEGLAIANLLKEADLVATTSEALRMIKQGAVKVDGEKLEDGKALI 379


>gi|297565391|ref|YP_003684363.1| tyrosyl-tRNA synthetase [Meiothermus silvanus DSM 9946]
 gi|296849840|gb|ADH62855.1| tyrosyl-tRNA synthetase [Meiothermus silvanus DSM 9946]
          Length = 447

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 93/425 (21%), Positives = 183/425 (43%), Gaps = 56/425 (13%)

Query: 14  ERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           E G +  I + + L+ L S   +T  +G D T   +H GH   L  +   Q+ GHK + +
Sbjct: 15  EAGSVEIIPHEKLLEKLSSGKKLTVKLGLDPTRPDIHIGHAVVLRKMRQFQELGHKVVII 74

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
           +G  T++IGDPS R  +R  +  +E + N +         +     +   L  N+E WL 
Sbjct: 75  IGDFTAMIGDPSGRSATRPPLTLEETRANAKSYVEQVGKILITEDQERFELRYNSE-WLE 133

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDC 193
           ++ + ++++ + S  +V +ML  E  ++R  +   +S  EF Y   Q YD V +  +   
Sbjct: 134 NLNFKEVIK-LASQLTVAQMLEREDFKNRYTQGIPISIHEFLYPFAQGYDSVPIRAD--- 189

Query: 194 RLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTS 253
            ++MGG+DQ  N++ G ++       +  A   PLL    G KM K+    I + +E   
Sbjct: 190 -VEMGGTDQKFNLLVGREVQRAYGLEEQVAFIMPLLEGPDGRKMSKSYDNYIGITEE--- 245

Query: 254 PYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT------ 307
           P   ++    + D  +  + +  T L   EI ++ + +G  +  A +++A  +       
Sbjct: 246 PAEIYRKLMKVGDDLLPKYLELCTDLTPQEIQQVLE-KGGPVG-AHRVLARLVAGSYALP 303

Query: 308 -----------------TMVHGREEAEKA---ATAAMECFDMSIH--------------- 332
                                GR+   +A     A +  + +++                
Sbjct: 304 RIPARLDRELYEEMGYRLEAAGRDSETQAVLIVVAPLTGYSLNVSETVRQAEERYNEVAK 363

Query: 333 ---SQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEK 388
                 + T+ I+  E+  G +G+  L   +G   S  EA+R +++  ++I+  +I++  
Sbjct: 364 GGIPDDIRTVPITSSELQEGRIGVAKLFTLSGLTESNGEAKRMIQNRGLRIDGEVITDPN 423

Query: 389 LQIKL 393
           +Q+ L
Sbjct: 424 MQVSL 428


>gi|109896842|ref|YP_660097.1| tyrosyl-tRNA synthetase [Pseudoalteromonas atlantica T6c]
 gi|109699123|gb|ABG39043.1| tyrosyl-tRNA synthetase [Pseudoalteromonas atlantica T6c]
          Length = 399

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 96/356 (26%), Positives = 166/356 (46%), Gaps = 27/356 (7%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   +  L   Q+ GH+ I L+G  T +IGDP+ ++ +R+ +  +++ 
Sbjct: 39  GFDPTAPDLHLGHTVLINKLRSFQQLGHEVIFLIGDFTGMIGDPTGKNVTRKPLTREDVL 98

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
            N E  K       K        +  N+E W+  +    +++ + S  +V RML  +  +
Sbjct: 99  ANAETYK---EQVFKILDPAKTTIRFNSE-WMEGLGASGMIK-LASSQTVARMLERDDFK 153

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL----GERL 216
            R    Q ++  EF Y ++Q +D V L    +  +++GG+DQ  N++ G +L    G+R 
Sbjct: 154 KRYANGQPIAIHEFLYPLVQGWDSVAL----ESDVELGGTDQRFNLLMGRELQKGQGQRP 209

Query: 217 KTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKR 275
           +T     L  PLL    G  KM K+L   I +     SP + +    +I D  +  +   
Sbjct: 210 QT----VLMMPLLEGLDGVQKMSKSLGNYIGIT---DSPSDMFGKIMSISDDLMWRYYDL 262

Query: 276 LTTLPMSEIDRMAKLQ---GKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIH 332
           L+   + EI  + K Q   G    + K  +A EI    H    AE A    ++ F  +  
Sbjct: 263 LSFKAIEEI-ALYKEQVAGGTNPRDIKIALAKEIIARFHDDAAAEAAHHEFIQRFQKNAI 321

Query: 333 SQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEK 388
              MP  +      + GM +  L+ +A    ST+EA R +K  A+K++   ++++K
Sbjct: 322 PDEMPEFTFEAG--AEGMAVANLLKEAALVASTSEAMRMIKQGAVKMDGEKVADQK 375


>gi|254237140|ref|ZP_04930463.1| tyrosyl-tRNA synthetase 2 [Pseudomonas aeruginosa C3719]
 gi|126169071|gb|EAZ54582.1| tyrosyl-tRNA synthetase 2 [Pseudomonas aeruginosa C3719]
          Length = 332

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 86/317 (27%), Positives = 143/317 (45%), Gaps = 18/317 (5%)

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           I L+G  T +IGDPS +  +R  +  +++ EN E  K     F      KT+     N T
Sbjct: 2   IFLIGDFTGMIGDPSGKSVTRPPLTREQVLENAETYKS--QVFKILDPAKTEVAF--NST 57

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           W+  +   D +R + S ++V RML  +    R    Q ++  EF Y ++Q YD V L  +
Sbjct: 58  WMDQLTPADFIR-LASQYTVARMLERDDFSKRYASNQPIAIHEFLYPLVQGYDSVALKAD 116

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNK 249
               +++GG+DQ  N++ G +L           LT PLL    G  KM K+L   I + +
Sbjct: 117 ----VELGGTDQKFNLLMGRELQRAYGQEAQVILTMPLLEGLDGVKKMSKSLGNYIGIQE 172

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATEIT 307
              +P   +    +I D  +  + + L+   + EID   K    G    + K  +A EI 
Sbjct: 173 ---APGVMYSKLVSIPDTLMWRYFELLSFRSLDEIDSFRKDVEAGANPRDIKIKLAEEIV 229

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
              HG E A  A  +A          + +P I +S  E    M + +++ KAG   +   
Sbjct: 230 ARFHGEEAAASAHKSAGNRLKDGELPEDLPEIELSSPE---DMPVASVLNKAGLVKNAAA 286

Query: 368 ARRHLKSNAIKINNSII 384
           AR  L + ++K++  ++
Sbjct: 287 ARDLLGAGSVKVDGQVV 303


>gi|257095538|ref|YP_003169179.1| tyrosyl-tRNA synthetase [Candidatus Accumulibacter phosphatis clade
           IIA str. UW-1]
 gi|257048062|gb|ACV37250.1| tyrosyl-tRNA synthetase [Candidatus Accumulibacter phosphatis clade
           IIA str. UW-1]
          Length = 399

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 88/374 (23%), Positives = 164/374 (43%), Gaps = 22/374 (5%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   +  L   Q  GH  + L+G  T +IGDP+ ++ +R  +  ++I+
Sbjct: 39  GFDPTAPDLHLGHTVLINKLRHFQDLGHHVMFLIGDFTGMIGDPTGKNATRPPLSHEQIR 98

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           +N    +     F      +T+     N +W   +    ++R + +  +V RML  +   
Sbjct: 99  DNATTYRE--QVFKILDPARTEVCF--NASWFEPLGAAGMIR-LAALHTVARMLERDDFA 153

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R +  Q ++  E  Y + Q YD V +  +    +++GG+DQ  N++ G +L +      
Sbjct: 154 KRYRGGQPIAIHELLYPLCQGYDSVAMKAD----VELGGTDQKFNLLVGRELQKHFGQAP 209

Query: 221 LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTL 279
              LT PLL    G  KM K+L   + +++    P   +    ++ D  +  + + L+  
Sbjct: 210 QCILTMPLLEGLDGVNKMSKSLGNYVGIDE---PPGEMFGKLMSVSDELMWRYFELLSFR 266

Query: 280 PMSEID--RMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMP 337
               I   R   + G+   E K ++A EI    HG + A +A       F        MP
Sbjct: 267 SSEAIAGFRQDAVDGRNPREIKVLLAQEIVGRFHGAQAALQALADFDARFRRGAIPDDMP 326

Query: 338 TISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
            +S       + + +  ++ ++G   ST+EA R ++   ++I+ + I +  L      F 
Sbjct: 327 ELSFPA--TDQPLTIAQVLKQSGLTASTSEALRMIEQGGVRIDGTRIDDRNLV-----FS 379

Query: 398 STGNIKLSFGKKNH 411
           +     L  GK+ +
Sbjct: 380 AKACFVLQVGKRKY 393


>gi|302546453|ref|ZP_07298795.1| tyrosine-tRNA ligase [Streptomyces hygroscopicus ATCC 53653]
 gi|302464071|gb|EFL27164.1| tyrosine-tRNA ligase [Streptomyces himastatinicus ATCC 53653]
          Length = 472

 Score = 97.8 bits (242), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 94/356 (26%), Positives = 155/356 (43%), Gaps = 39/356 (10%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA+ +H GH   +++L   Q+ GH    L+G  T+ IGDPS R   R  +   +I
Sbjct: 84  LGIDPTAADVHLGHTVPMIVLNRFQRMGHDVTLLIGDFTAKIGDPSGRTAERPPLTDDDI 143

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
             N+   +     F  +           N  WL    + +LL  +     V+++L  E  
Sbjct: 144 ARNLAGYQQQVRPFFDF----EKVSFRQNSEWLSPYTFPELLGLLAQ-VPVSQLLQREDF 198

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE-RLKT 218
           R+RL     L+  E  Y I Q  D V L    +  +++GG+DQ  N+  G  L E R + 
Sbjct: 199 RNRLAAGSGLTMSELLYPIAQGLDSVAL----ESDVELGGADQLLNLQMGRKLMELRGQQ 254

Query: 219 PKLFALTSPLL--TTASGTKMGKTLSGAIWLN--------KEMTSP----YNFWQYWRNI 264
           P+L  +T PL+  T  +G KM K+    + L+        K M+ P      + + W   
Sbjct: 255 PQLV-VTMPLIEGTDGTGAKMSKSKGNYVALSAPADDVFGKIMSIPDRLMKPYLEAWTEW 313

Query: 265 DDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAM 324
            DA++ +   RL T  +  +D             KK++A E+   ++G E A KA    +
Sbjct: 314 TDAEIAAATTRLETKSLHPMD------------LKKVLAGEVVAALYGVEAAMKARAGFI 361

Query: 325 ECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKA-GFATSTNEARRHLKSNAIKI 379
             F     +  + T+ +       G  + T++ K   F  S + ARR  K N +++
Sbjct: 362 AQFSKKSFT-DVGTLPVVDAAEHGGETIATVLSKVLEFQPSASAARRVAKQNGLRL 416


>gi|260771187|ref|ZP_05880114.1| tyrosyl-tRNA synthetase [Vibrio furnissii CIP 102972]
 gi|260613784|gb|EEX38976.1| tyrosyl-tRNA synthetase [Vibrio furnissii CIP 102972]
 gi|315179207|gb|ADT86121.1| tyrosyl-tRNA synthetase [Vibrio furnissii NCTC 11218]
          Length = 395

 Score = 97.8 bits (242), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 88/353 (24%), Positives = 159/353 (45%), Gaps = 20/353 (5%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  L   Q  GH    L+G  T ++GDP+ ++ +R  +  +++
Sbjct: 38  LGADPTAPDIHLGHTVILNKLRTFQDLGHDVTFLIGDFTGMVGDPTGKNTTRPPLTREDV 97

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
             N E  K      +     K   +  N+E WL  +    ++R + +  +V RML  +  
Sbjct: 98  LRNAETYKQQVFKILDPAKTK---IQFNSE-WLSQLGAEGMIR-LAANQTVARMLERDDF 152

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
           + R    Q ++  EF Y +LQ YD V +    +  +++GG+DQ  N++ G +L +     
Sbjct: 153 KKRYANGQPIAIHEFMYPLLQGYDSVAM----ETDVELGGTDQKFNLLMGRELQKSNGQK 208

Query: 220 KLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               L  PLL    G  KM K+    I +++   +P   +    +I D  + S+ + L+ 
Sbjct: 209 PQVVLMMPLLVGLDGEKKMSKSAHNYIGVSE---APSEMFGKIMSISDDLMWSYYELLSF 265

Query: 279 LPMSEIDRMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM 336
            P+ E+ +       G    + K ++A EI    H   +A+ A    +  F      +  
Sbjct: 266 RPLEELQQFKDDVANGTNPRDIKILLAKEIIARFHTEADADAAEQEFINRF-----QKGA 320

Query: 337 PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKL 389
               + + E   G+ +  L+ +AG   ST++A R +K  A+K +   + + KL
Sbjct: 321 MPEEMPEFEFEAGIAIANLLKEAGLVGSTSDAMRMIKQGAVKQDGEKLDDAKL 373


>gi|258544577|ref|ZP_05704811.1| tyrosine--tRNA ligase [Cardiobacterium hominis ATCC 15826]
 gi|258520208|gb|EEV89067.1| tyrosine--tRNA ligase [Cardiobacterium hominis ATCC 15826]
          Length = 418

 Score = 97.8 bits (242), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 89/359 (24%), Positives = 162/359 (45%), Gaps = 23/359 (6%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  LH GH   L  L   Q  GH+ + L+G  T++IGDPS +  +R  +  +++
Sbjct: 57  LGMDPTAPDLHFGHTVVLNKLRQFQDAGHQVLFLIGDFTALIGDPSGKSATRPPLSPEQV 116

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
             N E  K     F      KT+ +   N  W+  +   D++R + + ++V R+L  +  
Sbjct: 117 LANAETYKE--QVFKILDPAKTEVMF--NSHWMGPMSSTDMIR-LAAKYTVARILERDDF 171

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
           + R    + ++  EF Y + Q YD V +    +  +++GG+DQ  N++ G DL       
Sbjct: 172 QKRYTEGRPIALHEFLYPLTQGYDSVAM----EADVELGGTDQKFNLLVGRDLQREYGQS 227

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               +T P+L    G  KM K+L   I +      P N   + + +  +D + + +  T 
Sbjct: 228 PQAIITMPILEGLDGVQKMSKSLGNYIGI----FDPAN-EMFGKIMSISDELMW-RWFTL 281

Query: 279 LPMSEIDRMAKLQ-----GKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS 333
           L    +D +A LQ     G+   + K  +A E+    H    A  A  A +  F  +   
Sbjct: 282 LSFRSMDEIAALQAEVTAGRNPRDVKFELARELVARFHDEAAAAAAQEAFVNRFAKNEIP 341

Query: 334 QHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
           + +    I  D     +G+  ++  AG   ST+E  R +   A+K++   +++   +++
Sbjct: 342 EDLEEFRI--DAPDGALGIAHVLKAAGLVGSTSEGLRMVDGGAVKVDGERVASRDFKLE 398


>gi|119773987|ref|YP_926727.1| tyrosyl-tRNA synthetase [Shewanella amazonensis SB2B]
 gi|119766487|gb|ABL99057.1| tyrosyl-tRNA synthetase [Shewanella amazonensis SB2B]
          Length = 399

 Score = 97.4 bits (241), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 100/403 (24%), Positives = 182/403 (45%), Gaps = 31/403 (7%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           IL E   I ++   R L +          +G D TA  +H GH   L  L   Q+ GH+ 
Sbjct: 18  ILLEADLIEKLKEGRPLRV---------KLGADPTAPDIHLGHTVILNKLRLFQELGHEV 68

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           I L+G  T ++GDPS ++ +R  +  +++  N E  K      +     + +     N +
Sbjct: 69  IFLIGDFTGMVGDPSGKNSTRPPLTREQVLANAETYKEQVYKILDPAKTRIEF----NSS 124

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           WL  +    ++R + S  +V RML  +  + R    Q ++  EF Y +LQ +D V L  +
Sbjct: 125 WLEQLGAAGMIR-LASHQTVARMLERDDFKKRYGSGQPIAIHEFMYPLLQGWDSVALKAD 183

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNK 249
               +++GG+DQ  N++ G +L +         +  PLL    G  KM K+    I +++
Sbjct: 184 ----IELGGTDQKFNLLMGRELQKAEGQKPQTVIMMPLLEGLDGVKKMSKSAHNYIGVSE 239

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM-AKLQ-GKEINEAKKIIATEIT 307
              +P   +    +I D  +  +   L+  P++E+ +  A ++ G    + K  +A EI 
Sbjct: 240 ---APDEMFGKLMSISDELMWRYFDLLSFRPLAEVQQFKADVEAGANPRDIKIALAKEII 296

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
              H +  A+ A    ++ F        +  +++S    + GM +  L+ +AG   ST++
Sbjct: 297 ARFHDQAAADAAHQNFIDRFQKGAIPDDIEEVTLSAG--AEGMAVANLLKEAGLVGSTSD 354

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
           A R +K  A+K++      EKL+   Q F +  +     GK+ 
Sbjct: 355 AMRMIKQGAVKMD-----GEKLEDAKQVFSAGLSAVFQVGKRK 392


>gi|323250247|gb|EGA34137.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2009159199]
          Length = 195

 Score = 97.4 bits (241), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 67/196 (34%), Positives = 100/196 (51%), Gaps = 14/196 (7%)

Query: 232 ASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA--- 288
           A GTK GKT  GA+WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+ +    
Sbjct: 2   ADGTKFGKTEGGAVWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMDIEEINALEEED 61

Query: 289 KLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMEC-FDMSIHS------QHMPTISI 341
           K  GK    A+ ++A ++T +VHG EE   AA    EC F  S+ +      + +    +
Sbjct: 62  KNSGK-APRAQYVLAEQVTRLVHG-EEGLVAAKRITECLFSGSLSALSEADFEQLAQDGV 119

Query: 342 SKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
              E+ +G  L+  +V A    S  +AR+ + SNA+ IN    S+ +     +D      
Sbjct: 120 PMVEMEKGADLMQALVDAELQPSRGQARKTIASNAVTINGEKQSDPEYIFNDEDRLFGRY 179

Query: 402 IKLSFGKKNHIICHLC 417
             L  GKKN+  C +C
Sbjct: 180 TLLRRGKKNY--CLIC 193


>gi|217969658|ref|YP_002354892.1| tyrosyl-tRNA synthetase [Thauera sp. MZ1T]
 gi|217506985|gb|ACK53996.1| tyrosyl-tRNA synthetase [Thauera sp. MZ1T]
          Length = 399

 Score = 97.4 bits (241), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 84/362 (23%), Positives = 164/362 (45%), Gaps = 31/362 (8%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   +  +   Q+ GH+   L+G  T +IGDPS ++ +R  +  ++I 
Sbjct: 39  GFDPTAPDLHLGHTVLINKMRHFQELGHQVQFLIGDFTGMIGDPSGKNSTRPPLSREQIL 98

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           EN    +     F      KT+     N  W+  +    ++R + +  +V RML  +   
Sbjct: 99  ENARTYQE--QVFKILDPEKTEICF--NSAWMNDLGAAGMIR-LAAQQTVARMLERDDFA 153

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R    Q ++  EF Y + Q YD V +  +    +++GG+DQ  N++ G +L +      
Sbjct: 154 KRYGNNQPIAIHEFLYPLCQGYDSVAMKAD----VELGGTDQRFNLLMGRELQKHYGQEP 209

Query: 221 LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYN---------FWQYWRNIDDADVV 270
              +  PLL    G  KM K+L   I + +     +           W+Y+      +++
Sbjct: 210 QCVVMVPLLEGLDGVNKMSKSLGNYIGIAEPAKEIFGKTMSVSDTLMWRYY------ELL 263

Query: 271 SFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMS 330
           SF    ++  ++++ R     G+   + K ++A E     HG+  AE+A       F  +
Sbjct: 264 SFR---SSAEIAQL-RADVEGGRNPRDVKVMLAMEFVARFHGQRAAEEALADFEARFQRN 319

Query: 331 IHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQ 390
                +P ++++    + G+ L  ++ +AG   +T+EA R ++   ++I+     ++ L 
Sbjct: 320 AIPDDIPQVNVNVG--AGGLPLFQVLKQAGLTGTTSEAMRMVEQGGVRIDGERAEDKGLL 377

Query: 391 IK 392
           ++
Sbjct: 378 LR 379


>gi|318042196|ref|ZP_07974152.1| tyrosyl-tRNA synthetase [Synechococcus sp. CB0101]
          Length = 420

 Score = 97.4 bits (241), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 96/401 (23%), Positives = 163/401 (40%), Gaps = 68/401 (16%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D T S +H GH      L   Q  GH  + ++G  T+ IGDP+ +  +R  + ++++
Sbjct: 51  LGIDPTGSDIHLGHSILFRKLRAFQDAGHTAVLIIGDFTARIGDPTGKSATRVQLTAEQV 110

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALML------------NNETWLCSIKYIDLLREIGSF 147
           + N        +   + G G+  A  L             N  WL S+    ++  +G  
Sbjct: 111 EANAA------TYLAQLGQGQDPARALLDFETPGRLEVRRNSEWLASLDLPKVIELLG-I 163

Query: 148 FSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNII 207
            +V +ML+ E   +R      +S  EF Y +LQ YD V +  +    L++GG+DQ  N+ 
Sbjct: 164 STVGQMLAKEDFANRYGSGTPISLHEFLYPLLQGYDSVAIQAD----LELGGTDQKFNVA 219

Query: 208 CGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDD 266
            G DL         F +  P+L    G  KM K+L   + L+++   P + +     + D
Sbjct: 220 MGRDLQRHFGQRTQFGMLLPILPGLDGVQKMSKSLGNTVGLSED---PLSMYSKLEKVPD 276

Query: 267 ADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREE----------- 315
           A V  +   LT L +  +    +       E +K +A E+T   HG              
Sbjct: 277 AAVEEYLTLLTDLDLEALPANPR-------ERQKAMAVEVTRQRHGESAAQQAQADAGKL 329

Query: 316 ---AEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHL 372
              A  +  A  +  + S+ + + P  +              L+   G   S++EARR +
Sbjct: 330 VGGASGSGAADADVPEASLAAVNFPAKA------------FYLLSAVGVCASSSEARRQI 377

Query: 373 KSNAIKINNSIISNEKLQIKLQDF---DSTGNIKLSFGKKN 410
           +   +K++      EKL    Q+F   D      L  GKK 
Sbjct: 378 QGGGVKLD-----GEKLSDPNQEFAGPDQLAGKVLQLGKKT 413


>gi|222109827|ref|YP_002552091.1| tyrosyl-tRNA synthetase [Acidovorax ebreus TPSY]
 gi|221729271|gb|ACM32091.1| tyrosyl-tRNA synthetase [Acidovorax ebreus TPSY]
          Length = 410

 Score = 96.7 bits (239), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 95/364 (26%), Positives = 169/364 (46%), Gaps = 36/364 (9%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  +  LQ  GH+ I L+G  T++IGDPS R+ +R  + +++I
Sbjct: 53  LGLDPTAPDIHLGHTVVLNKMRQLQDLGHQVIFLIGDFTTLIGDPSGRNSTRPPLTAEQI 112

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           + N E     ++   K        +  N+E W   +    ++ ++ + ++V RM+     
Sbjct: 113 KVNAET---YYTQAAKVLDPARTEIRYNSE-WCDQLGARGMI-QLSAKYTVARMMERNDF 167

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R     S+S  EF Y +LQ YD V L  +    L++GG+DQ  N++ G  L +     
Sbjct: 168 HQRFTDGSSISLHEFLYPLLQGYDSVALRSD----LELGGTDQKFNLLMGRHLQQEWGQE 223

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRL-- 276
               LT PLL    G  KM K+ +  I + ++  S +           A V+S +  L  
Sbjct: 224 PQCVLTMPLLVGLDGVDKMSKSKNNYIGITEDANSMF-----------AKVLSISDTLMW 272

Query: 277 ---TTLPMSEIDRMAKLQ-----GKEINEAKKIIATEITTMVHGREEAEKAATAAMECFD 328
              T L    +  +A L+     G+   +AK ++A EIT   H    A+ A    +    
Sbjct: 273 DWYTLLSFKSLGEIAALKAEVAAGRNPKDAKVMLAKEITARFHSAALADAAEQDFVNRSK 332

Query: 329 MSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEK 388
             I    +P + ++       +G+  L+ +A  A ST+EA R +    ++++  ++S++ 
Sbjct: 333 GGI-PDDIPEVRLA----GAPLGIGALLKQANLAPSTSEANRLIDGGGVRVDGVVVSDKG 387

Query: 389 LQIK 392
           L+++
Sbjct: 388 LKLE 391


>gi|294055488|ref|YP_003549146.1| tyrosyl-tRNA synthetase [Coraliomargarita akajimensis DSM 45221]
 gi|293614821|gb|ADE54976.1| tyrosyl-tRNA synthetase [Coraliomargarita akajimensis DSM 45221]
          Length = 393

 Score = 95.9 bits (237), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 88/345 (25%), Positives = 155/345 (44%), Gaps = 21/345 (6%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D T   L  GHL     L   Q  GH+ I ++G  T++IGDPS R  +R ++  ++I
Sbjct: 34  LGVDPTRPDLTFGHLVVFNKLRQFQDLGHEAILIIGDFTTLIGDPSGRSSTRPVLTKEQI 93

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
            EN +    +  +F      KT   ++ N  W   + + D L+ +    +V RML  +  
Sbjct: 94  VENAQTY--LDQAFKILDEHKT--TVVYNSEWFNEMGFEDCLK-LARKMTVARMLERDDF 148

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R      +S +EF Y ++Q YD + L    +  +++GG+DQ  N++ G  L +     
Sbjct: 149 AKRYANNAPISIIEFLYPLIQGYDSLIL----NADVEIGGTDQLFNMLVGRALQKDAGKQ 204

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
           +   LT PLL    G  KM K+    I       SP + +    ++ D  + ++ + L  
Sbjct: 205 EQAVLTMPLLVGLDGVKKMSKSQDNYIAFTD---SPKDMFGKIMSVSDDTMWTYYRLLLE 261

Query: 279 LPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPT 338
           L   +ID   KL+     +AKK +A+ +    H  ++A+       + F  +     MPT
Sbjct: 262 LDEEKID---KLKAGHPMDAKKHLASSLVGQFHSMKDAKHELEQFEQVFSKNKIPDDMPT 318

Query: 339 IS---ISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKIN 380
            S   ++ D  +    L+ L+  +    S    RR ++   +K++
Sbjct: 319 FSWSDLAGD--AEAAKLVDLMGASELFESKGAIRRLIQQGGVKVD 361


>gi|319785786|ref|YP_004145261.1| tyrosyl-tRNA synthetase [Pseudoxanthomonas suwonensis 11-1]
 gi|317464298|gb|ADV26030.1| tyrosyl-tRNA synthetase [Pseudoxanthomonas suwonensis 11-1]
          Length = 420

 Score = 95.9 bits (237), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 101/388 (26%), Positives = 166/388 (42%), Gaps = 37/388 (9%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   L  +   Q  GH+ I L+G  T +IGDP+ +  +R+ +  +++ 
Sbjct: 57  GFDPTAPDLHLGHTVLLNKMRQFQDLGHQVIFLIGDFTGMIGDPTGKSATRKPLTREDVL 116

Query: 101 ENIEK-IKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
            N E   + +F    +  T     +  N+E W   +   D++R  G   +V RML  +  
Sbjct: 117 ANAETYAEQVFKVLDRERT----EVRFNSE-WFGQMSAADMIRLAGQ-HTVARMLERDDF 170

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R   +QS++  EF Y ++Q YD V L  +    +++GG+DQ  N++ G  L E     
Sbjct: 171 SKRFAAQQSIAIHEFLYPLVQGYDSVALKAD----VELGGTDQKFNLLMGRGLQEHYGQA 226

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYN---------FWQYWRNIDDADV 269
               LT PLL    G  KM K+L   I + +      N          W++   +     
Sbjct: 227 PQIVLTMPLLEGLDGVNKMSKSLGNYIGIAEPAIDIVNKTMKIGDELMWKWIELLSFEIS 286

Query: 270 VSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDM 329
            + AK+L        +  A L  ++I   K  +A E+ T  H    A  A          
Sbjct: 287 TAEAKKLRE------EVAAGLNPRDI---KLRLARELATRFHDAAAAGTAIAGWHAAVTG 337

Query: 330 SIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKL 389
              +  +P   ++    + G+ L  L+  AG   S +EA R LK  A+K++  ++ +   
Sbjct: 338 QGDTSLLPLQDVAVP--AEGLRLAALLTAAGITPSNSEANRKLKERAVKVDGEVVEDAS- 394

Query: 390 QIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           Q+    F+      L  GK+N     L 
Sbjct: 395 QVFAPGFEGV----LQVGKRNFARVRLV 418


>gi|78184144|ref|YP_376579.1| tyrosyl-tRNA synthetase [Synechococcus sp. CC9902]
 gi|115305826|sp|Q3AZE2|SYY_SYNS9 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|78168438|gb|ABB25535.1| tyrosyl-tRNA synthetase [Synechococcus sp. CC9902]
          Length = 415

 Score = 95.9 bits (237), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 97/382 (25%), Positives = 164/382 (42%), Gaps = 35/382 (9%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D T S++H GH      L   Q  GH  + ++G  T+ IGDP+ +  +R  +   ++
Sbjct: 50  LGIDPTGSNIHLGHSILFRKLRAFQDAGHIAVLIIGDFTARIGDPTGKSATRVQLSKNDV 109

Query: 100 QEN-------IEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNR 152
             N       + + +   ++ + + T     +  N+E WL  +    ++  +G+  +V +
Sbjct: 110 AVNASTYLRQLGQDQPKETALLDFETPGRLEVRYNSE-WLEGMDLPAVIGLLGT-GTVGQ 167

Query: 153 MLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL 212
           ML+ E   +R      ++  EF Y +LQ YD V  A N D  +++GG+DQ  N+  G DL
Sbjct: 168 MLAKEDFSNRYNSGTPIALHEFLYPLLQGYDSV--AVNAD--VELGGTDQKFNVAMGRDL 223

Query: 213 GERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVS 271
                    F L  P+L    G  KM KTL   + L  +   P + +     + D  +  
Sbjct: 224 QRHFGRGTQFGLLLPILVGLDGAQKMSKTLGNTVGLEDD---PLSMYSKLEKVGDTAIND 280

Query: 272 FAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECF-DMS 330
           +   LT L +  +    +       E +K +A  +T   HG + A KA   A        
Sbjct: 281 YVTLLTDLNVEALPENPR-------EKQKAMALAVTATRHGTDAAAKAQLDAGNLVGGAG 333

Query: 331 IHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQ 390
             S  +P  S+    V+       L+   G   S++EARR +K  A +++      EK+ 
Sbjct: 334 DASADVPEASLLA--VNFPAKAFYLMSAVGICASSSEARRQIKGGAARLD-----GEKIT 386

Query: 391 IKLQDFDSTGNIK---LSFGKK 409
              Q+F S   +    L  GKK
Sbjct: 387 DPNQEFASAAELDGRVLQLGKK 408


>gi|332527115|ref|ZP_08403194.1| tyrosyl-tRNA synthetase [Rubrivivax benzoatilyticus JA2]
 gi|332111545|gb|EGJ11527.1| tyrosyl-tRNA synthetase [Rubrivivax benzoatilyticus JA2]
          Length = 396

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 100/396 (25%), Positives = 174/396 (43%), Gaps = 70/396 (17%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  +  LQ  GH  I L+G  TS+IGDPS R+ +R  +  ++I
Sbjct: 38  LGLDPTAPDIHIGHTVVLNKMRQLQDLGHTVIFLIGDFTSMIGDPSGRNSTRPPLTREQI 97

Query: 100 QENIEK-------IKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNR 152
           + N +        +     + I+Y +  +DAL                + ++ + ++V R
Sbjct: 98  EANAQTYYKQASLVLDPARTEIRYNSEWSDALGARG------------MIQLAARYTVAR 145

Query: 153 MLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL 212
           M+  +  + R +    +S  EF Y ++Q YD V L  +    L++GG+DQ  N++ G  L
Sbjct: 146 MMERDDFKKRFESNTPISVHEFLYPLMQGYDSVALKSD----LELGGTDQKFNLLVGRAL 201

Query: 213 GERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVS 271
                      LT PLL    G  KM K+    + +    T P N          A ++S
Sbjct: 202 QAEYGQEPQCILTMPLLEGLDGVEKMSKSKGNYVGI----TEPANAMF-------AKILS 250

Query: 272 FAKRL-----TTLPMSEIDRMAKLQ-----GKEINEAKKIIATEITTMVHG-------RE 314
            +  L     T L     D +A L+     G+   +AK ++A EITT  H         E
Sbjct: 251 ISDELMWRWYTLLSFRSEDEIAALKREVEGGRNPKDAKVMLAKEITTRFHSAAAAEAAHE 310

Query: 315 EAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKS 374
           + ++ A   +           +P  S+S       +G+  L+ +AG   ST+EA R ++ 
Sbjct: 311 DFQRRAAGGV--------PDEIPECSLS----GAPLGIAALLKQAGLVPSTSEAMRMVEQ 358

Query: 375 NAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
             ++++  ++S++ L++      + G   +  GK+ 
Sbjct: 359 GGVRVDGGVVSDKALKL------AAGTYVVQVGKRK 388


>gi|254243745|ref|ZP_04937067.1| tyrosyl-tRNA synthetase 2 [Pseudomonas aeruginosa 2192]
 gi|126197123|gb|EAZ61186.1| tyrosyl-tRNA synthetase 2 [Pseudomonas aeruginosa 2192]
          Length = 254

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 67/210 (31%), Positives = 101/210 (48%), Gaps = 10/210 (4%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   +  L   Q  GH+ I L+G  T +IGDPS +  +R  +  +++ 
Sbjct: 39  GFDPTAPDLHLGHTVLINKLRQFQDLGHQVIFLIGDFTGMIGDPSGKSVTRPPLTREQVL 98

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           EN E  K     F      KT+     N TW+  +   D +R + S ++V RML  +   
Sbjct: 99  ENAETYKS--QVFKILDPAKTEVAF--NSTWMDQLTPADFIR-LASQYTVARMLERDDFS 153

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R    Q ++  EF Y ++Q YD V L  ++    ++GG+DQ  N++ G +L        
Sbjct: 154 KRYASNQPIAIHEFLYPLVQGYDSVALKSDF----ELGGTDQKFNLLMGRELQRAYGQEA 209

Query: 221 LFALTSPLLTTASGT-KMGKTLSGAIWLNK 249
              LT PLL    G  KM K+L   I + +
Sbjct: 210 QVILTMPLLEGLDGVKKMSKSLGNYIGIQE 239


>gi|33865104|ref|NP_896663.1| tyrosyl-tRNA synthetase [Synechococcus sp. WH 8102]
 gi|81572943|sp|Q7TTW9|SYY_SYNPX RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|33638788|emb|CAE07083.1| t-RNA synthetase, class Ib:Tyrosyl-tRNA synthetase [Synechococcus
           sp. WH 8102]
          Length = 415

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 99/385 (25%), Positives = 169/385 (43%), Gaps = 41/385 (10%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D T S++H GH      L   Q  GH  + ++G  T+ IGDP+ +  +R  +  +++
Sbjct: 50  LGIDPTGSNIHLGHSILFRKLRAFQDAGHTAVLIIGDFTARIGDPTGKCATRVQLSKEDV 109

Query: 100 QEN-------IEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNR 152
             N       + + +   ++ + + T     +  N+E WL  +    ++  +G+  +V +
Sbjct: 110 AANASTYLRQLGQDQPKETALLDFETPGRLEVRYNSE-WLEGMDLPAVIGLLGT-GTVGQ 167

Query: 153 MLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL 212
           ML+ +    R      ++  EF Y +LQ YD V  A N D  +++GG+DQ  N+  G DL
Sbjct: 168 MLAKDDFSKRYGSGTPIALHEFLYPLLQGYDSV--AVNAD--VELGGTDQKFNVAMGRDL 223

Query: 213 GERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDA---D 268
                    F L  P+L    G  KM K+L   + L ++   P + +     + D    D
Sbjct: 224 QRHFNKGTQFGLLLPILVGLDGVQKMSKSLGNVVGLEED---PLSMYSKLEKVGDGAIND 280

Query: 269 VVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAA-TAAMECF 327
            V+    L    + E  R          E +K +A  +T   HG E A+KA   AA    
Sbjct: 281 YVTLLTDLDLATLPENPR----------EKQKAMALAVTASRHGMEAAQKAQLDAASLVG 330

Query: 328 DMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNE 387
                +  +P  S++  EV+       L+   G   S++EARR +K  A+++       E
Sbjct: 331 GAGDAATEVPGASLA--EVNFPAKAFYLLSAVGICASSSEARRQIKGGAVRLE-----GE 383

Query: 388 KLQIKLQDFDSTGNIK---LSFGKK 409
           K+    Q+F S   ++   L  GKK
Sbjct: 384 KIGDPNQEFASAAELEGKVLQLGKK 408


>gi|163785347|ref|ZP_02179985.1| tyrosyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
 gi|159879385|gb|EDP73251.1| tyrosyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
          Length = 278

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 83/268 (30%), Positives = 136/268 (50%), Gaps = 29/268 (10%)

Query: 139 DLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMG 198
           DL+R + + ++V RML  +  + R    + ++  EF Y +LQAYD V +  +    +++G
Sbjct: 3   DLIR-LTARYTVARMLERDDFKKRFSENKPIAIHEFIYPLLQAYDSVAIKAD----VELG 57

Query: 199 GSDQWGNIICGIDLGER--LKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPY 255
           GSDQ  N++ G D+     ++ P++ A+  PLL    G  KM K+    I + +    P 
Sbjct: 58  GSDQRFNLLIGRDIQREYGIEKPQV-AILLPLLVGTDGVRKMSKSYGNYIGITE---PPE 113

Query: 256 NFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI---NEAKKIIATEITTMVHG 312
             +    +I D  +  + K LT L   EI++M +   K I    + KK +A  I    H 
Sbjct: 114 EMFGKLMSIPDELMWDYWKFLTDLTEEEIEKMKEDVEKGILHPMDVKKELAMYIVERFHS 173

Query: 313 REEAEKAATAAMECFDMSIHSQHM-------PTISISKDEVSRGMGLLTLIVKAGFATST 365
           +E+A KA     E F+  +HS+         P I IS +E  + + L  L+ K GFA+S 
Sbjct: 174 KEDAVKAK----EHFE-KVHSKRELPENIPEPEIIISSEE--KKIPLYELVYKLGFASSK 226

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKL 393
           +EARR +KS A+KIN    ++   ++ L
Sbjct: 227 SEARRLIKSGAVKINGEKFTDFNFEVDL 254


>gi|261885062|ref|ZP_06009101.1| tyrosyl-tRNA synthetase [Campylobacter fetus subsp. venerealis str.
           Azul-94]
          Length = 307

 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 87/303 (28%), Positives = 138/303 (45%), Gaps = 51/303 (16%)

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  +   D L  + S F+V RML  +    R K E  ++  EF Y +LQ YD V +
Sbjct: 31  NSAWLSKLG-ADGLIALASTFNVARMLERDDFTKRYKNETPIAISEFLYPLLQGYDSVAM 89

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTS-PLLTTASGT-KMGKTLSGAI 245
                C ++MGG+DQ  N++ G  LG      K  A+   PLL    G  KM K+L   I
Sbjct: 90  K----CDIEMGGTDQKFNLLMGRTLGRTYGIGKEQAIIMMPLLVGLDGVNKMSKSLGNYI 145

Query: 246 WLNKEMTSPYN---------FWQYWRNIDDA---DVVSFAKRLTTLPMSEIDRMAKLQGK 293
            + +     +           W ++  + D    D+++    +++         AKL  K
Sbjct: 146 GVTESANDIFAKTLSISDDLMWVWYELLSDKSSDDILNLKADVSS---------AKLHPK 196

Query: 294 EINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQH-----MPTISISKDEVSR 348
           ++ E    +A EIT+  HG  EA     AA + FD  +HS+      MP   I KDE+  
Sbjct: 197 KVKEN---LALEITSRFHGISEA----GAAKDEFD-RVHSKKELPSDMPEFEIVKDEI-- 246

Query: 349 GMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGK 408
              ++  +      +S  EARRH+K++A+ +N   + +E+L++      + G   L  GK
Sbjct: 247 --WIVEALSNCALCSSNAEARRHIKADAVSVNQQKVIDEQLKL------AKGEYILQVGK 298

Query: 409 KNH 411
           K +
Sbjct: 299 KTY 301


>gi|218294915|ref|ZP_03495769.1| tyrosyl-tRNA synthetase [Thermus aquaticus Y51MC23]
 gi|218244823|gb|EED11347.1| tyrosyl-tRNA synthetase [Thermus aquaticus Y51MC23]
          Length = 433

 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 100/414 (24%), Positives = 172/414 (41%), Gaps = 50/414 (12%)

Query: 36  VTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMR 95
           +T  +G D T   LH GH   L  +   Q+ GH+ + ++G  T +IGDPS R ++R  + 
Sbjct: 38  LTVKLGADPTRPDLHLGHAVVLRKMRQFQELGHRVVLIIGDFTGMIGDPSGRSKTRPPLT 97

Query: 96  SQEIQEN----IEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVN 151
            +E +EN    +E+   I          +   L  N+E WL  + + +++R + S  +V 
Sbjct: 98  LEETRENARTYVEQAGKILRQ-----EPELFELRYNSE-WLEGLTFKEVVR-LTSLMTVA 150

Query: 152 RMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGID 211
           +ML  E  + R +    +S  EF Y   QAYD V +  +    ++MGG+DQ  N++ G +
Sbjct: 151 QMLEREDFKKRYQEGIPISLHEFLYPFAQAYDSVAIRAD----VEMGGTDQRFNLLVGRE 206

Query: 212 LGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWL--------NKEMTSPYNFWQ-YW 261
           +              PLL    G  KM K+L   I +         K M  P    + Y+
Sbjct: 207 VQRAYGQSPQVCFLMPLLVGLDGQEKMSKSLDNYIGVAEPPEVMFKKLMRVPDPLLEDYF 266

Query: 262 RNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVH---------- 311
           R + D +       L   P+     +A++       A+  I   I    +          
Sbjct: 267 RLLTDLEEEEIEALLKAGPVPAHRVLARILTAAY--ARPQIPPRIDRAFYESLGYRLEAL 324

Query: 312 ------GREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATS 364
                 G EE  +A     E     I  + +P + I   E+  G + +  L   AG   S
Sbjct: 325 GRDKEAGPEEVRRAEARYDEVAKGGI-PEEIPEVEIPASELREGRIWVARLFTLAGLTPS 383

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLCG 418
             EARR +++  ++++  ++ +  L++     D +  + L  GK   +   L G
Sbjct: 384 NAEARRLIQNRGLRMDGEVVEDPNLEV-----DLSRPLVLQRGKDRFVRVRLQG 432


>gi|87123678|ref|ZP_01079528.1| t-RNA synthetase, class Ib:Tyrosyl-tRNA synthetase [Synechococcus
           sp. RS9917]
 gi|86168247|gb|EAQ69504.1| t-RNA synthetase, class Ib:Tyrosyl-tRNA synthetase [Synechococcus
           sp. RS9917]
          Length = 415

 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 98/388 (25%), Positives = 163/388 (42%), Gaps = 47/388 (12%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D T S +H GH      L   Q  GH  + ++G  T+ IGDP+ +  +R  +  +++
Sbjct: 50  LGIDPTGSDIHLGHSILFRKLRAFQDAGHTAVLIIGDFTARIGDPTGKSATRVQLSKEQV 109

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALM----------LNNETWLCSIKYIDLLREIGSFFS 149
           Q N       + + +  G  K  AL+            N  WL  +    ++  +G+  +
Sbjct: 110 QANAT----TYLNQLGQGQPKEQALLDFETPGRLEVRRNSEWLEGLDLPQVIGLLGT-AT 164

Query: 150 VNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICG 209
           V +ML+ +    R      ++  EF Y +LQ YD V +    D  +++GG+DQ  N+  G
Sbjct: 165 VGQMLAKDDFSKRYGSGTPIALHEFLYPLLQGYDSVAV----DADVELGGTDQKFNVAMG 220

Query: 210 IDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDA- 267
            DL         F +  P+L    G  KM K+L   + L ++   P + +     + D  
Sbjct: 221 RDLQRHFGQRTQFGMLLPILVGLDGVQKMSKSLGNTVGLEED---PLSMYSKLEKVGDGA 277

Query: 268 --DVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAME 325
             D V+    L    + E  R          E +K +A  +T   HG+E A KA   A  
Sbjct: 278 INDYVTLLTDLDLETLPENPR----------EKQKAMALAVTASRHGQEAAAKAQADAAT 327

Query: 326 CF-DMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSII 384
                   +  +P  S++  EV+       L+   G   S++EARR +K  A ++    I
Sbjct: 328 LVGGAGDAAADVPEASLA--EVNFPAKAFYLLSAVGICASSSEARRQIKGGAARLEGEKI 385

Query: 385 SNEKLQIKLQDFDSTGNIK---LSFGKK 409
           S+       Q+F S   ++   L  GKK
Sbjct: 386 SDPN-----QEFASAAELEGKVLQLGKK 408


>gi|297161577|gb|ADI11289.1| tyrosyl-tRNA synthetase [Streptomyces bingchenggensis BCW-1]
          Length = 472

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 88/348 (25%), Positives = 159/348 (45%), Gaps = 23/348 (6%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA+ +H GH   ++ L   Q+ GH    L+G  T+ IGDP+ R   R  +   +I
Sbjct: 84  LGIDPTATDVHLGHAVPMIALSRFQRMGHDVTLLIGDFTAKIGDPTGRTAERPPLTDDDI 143

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
             N+   +     F  +           N  WL    + +LL  +      +++L  +  
Sbjct: 144 ARNLAGYRDQVRPFFDF----EKVSFRQNSEWLAPYTFPELLGLLAQ-VPASQLLQRDDF 198

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE-RLKT 218
           R+RL     L+  E  Y I Q  D V L    +C +++GG+DQ  N+  G  L E R + 
Sbjct: 199 RNRLAEGSGLTMSELLYPIAQGLDSVAL----ECDIELGGADQLLNLQMGRKLMELRGQQ 254

Query: 219 PKLFALTSPLL--TTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRL 276
           P+L  +T PL+  T  +G KM K+    I L+    +  + +    +I D  +  + +  
Sbjct: 255 PQLV-VTMPLIEGTDGTGAKMSKSKGNYIALS---ATAEDVFGKIMSIPDRLMAPYLRAW 310

Query: 277 TTLPMSEIDRM-AKLQGKEIN--EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS 333
           T    SEID +  +L+ + ++  + KK++A E+ T ++G   A  A    +  F     +
Sbjct: 311 TEWTDSEIDLVKGRLEDRSLHPMDLKKVLAGEMVTALYGLPAAMSARAGFVAQFSKKSFT 370

Query: 334 --QHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKI 379
             + +P +  ++        +L+ +++  F  S + ARR  K N +++
Sbjct: 371 DVEALPEVDAAEHGAESVATVLSKVLQ--FQPSASAARRVAKQNGLRL 416


>gi|145298222|ref|YP_001141063.1| tyrosyl-tRNA synthetase [Aeromonas salmonicida subsp. salmonicida
           A449]
 gi|142850994|gb|ABO89315.1| tyrosyl-tRNA synthetase [Aeromonas salmonicida subsp. salmonicida
           A449]
          Length = 399

 Score = 94.7 bits (234), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 95/374 (25%), Positives = 172/374 (45%), Gaps = 24/374 (6%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  L   Q  GH+ I L+G  T+++GDPS ++ +R  +  + I
Sbjct: 38  LGMDPTAPDIHLGHTVILNKLKTFQDLGHEIILLIGDFTAMVGDPSGKNSTRPPLSEEAI 97

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           + N   +     +F      KT   +  N +WL  +    +++ + +  +V RM+  +  
Sbjct: 98  KHN--ALTYAEQAFKILDPAKTR--IEYNSSWLGELGATGMIK-LAAKQTVARMMERDDF 152

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
           + R    QS++  EF Y +LQ YD V L  +    +++GG+DQ  N++ G +L +     
Sbjct: 153 KKRYTGGQSIAIHEFLYPLLQGYDSVALKAD----VELGGTDQKFNLLMGRELQKDAGMA 208

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               L  PLL    G  KM K+ +  I ++    +P   +    +I D  + ++ + L++
Sbjct: 209 AQCVLMMPLLVGLDGVKKMSKSAANYIGVH---DAPGEMFGKIMSITDDLMWNYYELLSS 265

Query: 279 LPMSEIDRM-AKLQGKEIN--EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQH 335
            P++EI+   A +    +N  + K  +A EI    H    AE A     + F  +     
Sbjct: 266 RPLAEIEEFKAGIAANTLNPRDVKIWLAKEIIARYHDEAAAEAAHEDFTQRFSKNAIPDE 325

Query: 336 MPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           MP + ++ +    G+ +  L+  A    +T+EA R +K  A+K +   + + K  +    
Sbjct: 326 MPEVELALE--GDGLAIANLLKDADLVATTSEALRMIKQGAVKRDGEKLEDGKALV---- 379

Query: 396 FDSTGNIKLSFGKK 409
              TG      GK+
Sbjct: 380 --GTGTAVYQVGKR 391


>gi|298491061|ref|YP_003721238.1| tyrosyl-tRNA synthetase ['Nostoc azollae' 0708]
 gi|298232979|gb|ADI64115.1| tyrosyl-tRNA synthetase ['Nostoc azollae' 0708]
          Length = 418

 Score = 94.4 bits (233), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 93/378 (24%), Positives = 166/378 (43%), Gaps = 32/378 (8%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D T + +H GH   +  L   Q  GH  + ++G  T+ IGDP+ +   R  +   ++
Sbjct: 64  LGIDPTGADIHLGHSIPVRKLRAFQDAGHTAVLIIGDFTARIGDPTGKSHVRCQLTEGDV 123

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
            +N +         + + T  +  +  N+E WL  +    +L+ + S  +V +ML+ E  
Sbjct: 124 AQNAQTYLDQVRPILDFDTPGSLEVRYNSE-WLSRLDLGKVLQLL-STMTVGQMLAKEGF 181

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R K+E  +   EF Y ++QAYD V      +  +++GG+DQ  NI  G DL       
Sbjct: 182 AERYKKENPIFLHEFLYPLMQAYDSVAT----EADVELGGTDQKFNIAVGRDLQRHFGLK 237

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
             F L  P+L    G  KM K+L+  + L++    P   +Q  + + D  +  + + LT 
Sbjct: 238 PQFGLLLPILIGTDGVRKMSKSLNNYVGLSEH---PSQKYQKIQAVPDNLLSQYFELLTD 294

Query: 279 LPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPT 338
           LP+  +    + +       ++ +A EI    HG   A +A  AA          +    
Sbjct: 295 LPLDSLPENPRAR-------QEFLAWEIVRQYHGEVAATEAKEAAKSG------GKEGTL 341

Query: 339 ISISKDEVSRGMGLLTLIVKA-GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
           +  S   + +    L  I+ A G   ST E +R ++   ++++      EK+      F 
Sbjct: 342 LEFSLAAIVQFPVKLAFILGATGLCKSTAEGKRKIQEGGVRLD-----GEKVTDADTTFA 396

Query: 398 STGNIK---LSFGKKNHI 412
           + G++    L  GKKN +
Sbjct: 397 APGDLYFKVLQVGKKNFV 414


>gi|33240859|ref|NP_875801.1| tyrosyl-tRNA synthetase [Prochlorococcus marinus subsp. marinus
           str. CCMP1375]
 gi|81664162|sp|Q7VAP7|SYY_PROMA RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|33238388|gb|AAQ00454.1| Tyrosyl-tRNA synthetase [Prochlorococcus marinus subsp. marinus
           str. CCMP1375]
          Length = 416

 Score = 93.6 bits (231), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 101/384 (26%), Positives = 177/384 (46%), Gaps = 39/384 (10%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D T S +H GH      L   Q  GH  I ++G  T+ IGDP+ + ++R  +  +E+
Sbjct: 51  LGIDPTGSEIHLGHSIIFRKLRAFQDAGHTAILIIGDFTARIGDPTGKSKTRVQLSPEEV 110

Query: 100 QENIE-------KIKGIFSSFIKYGTGKTDALMLNNETWLCS---IKYIDLLREIGSFFS 149
           ++N E       K +   +S + + T     +  N+E WL     ++ IDLL    S  +
Sbjct: 111 EKNSENYLNQLGKGQSKETSLLDFETEGRLEVRRNSE-WLEGFDMVQIIDLL----SKST 165

Query: 150 VNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICG 209
           V +ML+ E   +R     S++  EF Y + Q YD V +  +    +++GG DQ  N+  G
Sbjct: 166 VGQMLAKEEFANRYTSGTSIALHEFLYPLFQGYDSVAVQAD----VELGGVDQKFNVAMG 221

Query: 210 IDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDAD 268
            D+         F L  P+L    G  KM K+L   + L ++  S Y+  +    + D+ 
Sbjct: 222 RDMQRHFSQKPQFGLLLPILVGLDGVQKMSKSLGNTVGLAEDALSMYSKLE---KVPDSQ 278

Query: 269 VVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHG---REEAEKAATAAME 325
           V ++   LT   + ++   A+       E +K +A  +T   HG    + A+K A+  + 
Sbjct: 279 VNNYLTLLTDCEIRDLTLNAR-------ELQKFMALNVTAQFHGLSVAKIAQKDASKIVS 331

Query: 326 CFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIIS 385
               ++  + +P +S+S   V+       L+   G  +S++ ARR ++  A++I+   I 
Sbjct: 332 GLKETV--EDVPVLSVSN--VNFPTKAFHLLSSIGLCSSSSNARRQIQGGALRIDGKKIL 387

Query: 386 NEKLQIKLQDFDSTGNIKLSFGKK 409
           +   +   Q  D  G I L  GKK
Sbjct: 388 DPNFEFVDQK-DIVGKI-LQLGKK 409


>gi|167945808|ref|ZP_02532882.1| tyrosyl-tRNA synthetase [Endoriftia persephone 'Hot96_1+Hot96_2']
          Length = 304

 Score = 93.2 bits (230), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 75/268 (27%), Positives = 128/268 (47%), Gaps = 14/268 (5%)

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N +W+  ++  DL++  G + +V RML  +    R    QS++  EF Y ++Q YD V L
Sbjct: 28  NSSWMGEMRAADLIQLAGKY-NVARMLERDDFSKRYSSGQSIAIHEFLYPLVQGYDSVAL 86

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIW 246
             +    +++GG+DQ  N++ G +L  +    +   LT P+L    G  KM K+L   I 
Sbjct: 87  KAD----VELGGTDQKFNLLVGRELQRQYGQEQQVILTMPILEGLDGVQKMSKSLGNYIG 142

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIAT 304
           +     +P + +    +I D  +  + + L+  PM EI+  R+   QG    + K ++A 
Sbjct: 143 IT---DAPEDMFGKIMSISDDLMWRYLELLSFRPMPEIESWRLEIEQGLNPRDVKILLAK 199

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E+    H    AE A    +  F        MP   +S  E   G+ +  L+   G   S
Sbjct: 200 ELVGRFHDEAAAEAAHQTFVSRFQKGQIPDEMPEFELSAGE---GLPIANLLRDVGLVKS 256

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIK 392
           T+EA R +K  A+KI+   I + KL+++
Sbjct: 257 TSEAMRMIKQGAVKIDGEKIGDTKLRLE 284


>gi|46199335|ref|YP_005002.1| tyrosyl-tRNA synthetase [Thermus thermophilus HB27]
 gi|55981368|ref|YP_144665.1| tyrosyl-tRNA synthetase [Thermus thermophilus HB8]
 gi|25091347|sp|P83453|SYY_THET2 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|81363981|sp|Q5SIH0|SYY_THET8 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|24158659|pdb|1H3F|A Chain A, Tyrosyl-Trna Synthetase From Thermus Thermophilus
           Complexed With Tyrosinol
 gi|24158660|pdb|1H3F|B Chain B, Tyrosyl-Trna Synthetase From Thermus Thermophilus
           Complexed With Tyrosinol
 gi|24987338|pdb|1H3E|A Chain A, Tyrosyl-Trna Synthetase From Thermus Thermophilus
           Complexed With Wild-Type Trnatyr(Gua) And With Atp And
           Tyrosinol
 gi|46196960|gb|AAS81375.1| tyrosyl-tRNA synthetase [Thermus thermophilus HB27]
 gi|55772781|dbj|BAD71222.1| tyrosyl-tRNA synthetase (tyrosine--tRNA ligase) (TyrRS) [Thermus
           thermophilus HB8]
          Length = 432

 Score = 93.2 bits (230), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 95/388 (24%), Positives = 165/388 (42%), Gaps = 43/388 (11%)

Query: 36  VTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMR 95
           +T  +G D T   LH GH   L  +   Q+ GHK + ++G  T +IGDPS R ++R  + 
Sbjct: 38  LTVKLGADPTRPDLHLGHAVVLRKMRQFQELGHKVVLIIGDFTGMIGDPSGRSKTRPPLT 97

Query: 96  SQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLS 155
            +E +EN +         ++      + L  N+E WL  + + +++R + S  +V +ML 
Sbjct: 98  LEETRENAKTYVAQAGKILRQEPHLFE-LRYNSE-WLEGLTFKEVVR-LTSLMTVAQMLE 154

Query: 156 FESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER 215
            E  + R +    +S  E  Y   QAYD V +  +    ++MGG+DQ  N++ G ++   
Sbjct: 155 REDFKKRYEAGIPISLHELLYPFAQAYDSVAIRAD----VEMGGTDQRFNLLVGREVQRA 210

Query: 216 LKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAK 274
                      PLL    G  KM K+L   I L +    P   ++    + D  + S+ +
Sbjct: 211 YGQSPQVCFLMPLLVGLDGREKMSKSLDNYIGLTE---PPEAMFKKLMRVPDPLLPSYFR 267

Query: 275 RLTTL------------PMSEIDRMAKLQGKEINEAKKIIATEITTMVH----------- 311
            LT L            P+     +A+L       A   I   I    +           
Sbjct: 268 LLTDLEEEEIEALLKAGPVPAHRVLARLLTAAY--ALPQIPPRIDRAFYESLGYAWEAFG 325

Query: 312 -----GREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATST 365
                G EE  +A     E     I  + +P ++I   E+  G + +  L   AG   S 
Sbjct: 326 RDKEAGPEEVRRAEARYDEVAKGGI-PEEIPEVTIPASELKEGRIWVARLFTLAGLTPSN 384

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKL 393
            EARR +++  ++++  ++++  LQ+ L
Sbjct: 385 AEARRLIQNRGLRLDGEVLTDPMLQVDL 412


>gi|284029848|ref|YP_003379779.1| tyrosyl-tRNA synthetase [Kribbella flavida DSM 17836]
 gi|283809141|gb|ADB30980.1| tyrosyl-tRNA synthetase [Kribbella flavida DSM 17836]
          Length = 400

 Score = 92.8 bits (229), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 90/365 (24%), Positives = 160/365 (43%), Gaps = 36/365 (9%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G D TA  LH GH   L ++  LQ  GH+ + L+G  T+ IGDP+ R E+R  +  ++I+
Sbjct: 39  GVDCTAPELHLGHAVNLWMMRALQDLGHRVVFLLGDLTTRIGDPTGRSETRPALSPEQIE 98

Query: 101 EN----IEKIKGIFSSFIKYGTGKTDALML---NNETWLCSIKYIDLLREIGSFFSVN-- 151
            N    +E++  +          +TD  +     N  W  ++    LL   G F  V   
Sbjct: 99  LNAAAFLEQVSLVL---------RTDPDVFEVRRNSEWYGAMDVATLL---GLFAHVTQA 146

Query: 152 RMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGID 211
           ++++ +  R+R+   + ++  E +Y +LQ YD   +  +    L + GSDQ  N   G  
Sbjct: 147 QLMARDMFRARVAAGREIALHELSYPVLQGYDSFAMRSD----LTVVGSDQLFNEQLGRH 202

Query: 212 LGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVV 270
             +RL       +TS +      G K  K+L+  I L     SP + +    ++ D  V 
Sbjct: 203 FQQRLGAEPQVVITSTITPGLDGGPKQSKSLNNYIALTD---SPRDKFGKLMSLPDELVE 259

Query: 271 SFAKRLTTLPMSEIDRM---AKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECF 327
           ++A+  T LP+  +  +   A + G    +AK  +A  + T  HG   A+    A    F
Sbjct: 260 TYARVYTELPLGTVAALGSSAAVGGPAARDAKLKLAAAVVTRYHGAGAAKAELEAFHRVF 319

Query: 328 DMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNE 387
                   MP + I    ++    L  L  +     S +E RR L+  A+ +    +++ 
Sbjct: 320 SDRAQPDDMPEVVIGPAPLTALELLEALRPR----DSRSELRRLLRQGAVSVGGVKLTDA 375

Query: 388 KLQIK 392
           + +++
Sbjct: 376 EARVE 380


>gi|116071219|ref|ZP_01468488.1| tyrosyl-tRNA synthetase [Synechococcus sp. BL107]
 gi|116066624|gb|EAU72381.1| tyrosyl-tRNA synthetase [Synechococcus sp. BL107]
          Length = 415

 Score = 92.8 bits (229), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 95/392 (24%), Positives = 168/392 (42%), Gaps = 55/392 (14%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D T S++H GH      L   Q  GH  + ++G  T+ IGDP+ +  +R  +   ++
Sbjct: 50  LGIDPTGSNIHLGHSILFRKLRAFQDAGHTAVLIIGDFTARIGDPTGKSATRVQLSKNDV 109

Query: 100 QEN-------IEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNR 152
             N       + + +   ++ + + T     +  N+E WL  +    ++  +G+  +V +
Sbjct: 110 AVNASTYLRQLGQDQPKATALLDFETPGRLEVRYNSE-WLEGMDLPAVIGLLGT-GTVGQ 167

Query: 153 MLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL 212
           ML+ E   +R      ++  EF Y +LQ YD V  A N D  +++GG+DQ  N+  G DL
Sbjct: 168 MLAKEDFSNRYSSGTPIALHEFLYPLLQGYDSV--AVNAD--VELGGTDQKFNVAMGRDL 223

Query: 213 GERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVS 271
                    F L  P+L    G  KM KTL   + L ++   P + +     + DA +  
Sbjct: 224 QRHFGRGTQFGLLLPILVGLDGAQKMSKTLGNTVGLEED---PLSMYSKLEKVGDAAIND 280

Query: 272 FAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEK-----------AA 320
           +   LT L +  +    +       E +K +A  +T   HG + A K           A 
Sbjct: 281 YVTLLTDLNVEVLPENPR-------EKQKAMALAVTATRHGMDAAAKAQLDAANLVGGAG 333

Query: 321 TAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKIN 380
            A+ +  + S+ S + P  +              L+   G   S++EARR +K  A +++
Sbjct: 334 DASADVPEASLLSVNFPAKA------------FYLMSAVGICASSSEARRQIKGGAARLD 381

Query: 381 NSIISNEKLQIKLQDFDSTGNIK---LSFGKK 409
              I++       Q+F +   +    L  GKK
Sbjct: 382 GDKITDPN-----QEFATAAELDGRVLQVGKK 408


>gi|289804201|ref|ZP_06534830.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. AG3]
          Length = 162

 Score = 92.8 bits (229), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 58/157 (36%), Positives = 85/157 (54%), Gaps = 12/157 (7%)

Query: 224 LTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSE 283
           LT PL+T A GTK GKT  GA+WL+ + TSPY F+Q+W N  DADV  F K  T + + E
Sbjct: 8   LTVPLITKADGTKFGKTEGGAVWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMDIEE 67

Query: 284 IDRMA---KLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMEC-FDMSIHS------ 333
           I+ +    K  GK    A+ ++A ++T +VHG EE   AA    EC F  S+ +      
Sbjct: 68  INALEEEDKNSGK-APRAQYVLAEQVTRLVHG-EEGLVAAKRITECLFSGSLSALSEADF 125

Query: 334 QHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARR 370
           + +    +   E+ +G  L+  +V A    S  +AR+
Sbjct: 126 EQLAQDGVPMVEMEKGADLMQALVDAELQPSRGQARK 162


>gi|194477160|ref|YP_002049339.1| tyrosyl-tRNA synthetase [Paulinella chromatophora]
 gi|171192167|gb|ACB43129.1| tyrosyl-tRNA synthetase [Paulinella chromatophora]
          Length = 420

 Score = 92.0 bits (227), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 102/387 (26%), Positives = 181/387 (46%), Gaps = 43/387 (11%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D T + +H GH      L   Q  GH  + ++G  T+ IGDP+ ++ +R  +  +E+
Sbjct: 52  LGIDPTGTDIHLGHSILFRKLRAFQDAGHIAVLIIGDFTARIGDPTGKNTTRVQLSIEEV 111

Query: 100 QENIE-------KIKGIFSSFIKYGT-GKTDALMLNNETWLCSIKYIDLLREIGSFFSVN 151
           + N +       K +    + + + T G+ +  +  N TWL  +  +++++ +G+  +V 
Sbjct: 112 EANAQTYLQQLGKDQPKEKALLDFETPGRLE--VYQNSTWLGEMDLLEIIKLLGT-ATVG 168

Query: 152 RMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGID 211
           +ML+ E   +R K    ++  EF Y +LQ YD V +  +    +++GG+DQ  N+  G D
Sbjct: 169 QMLAKEDFANRYKLGTPIALHEFLYPLLQGYDSVAIRAD----VELGGTDQRFNVAIGRD 224

Query: 212 LGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVV 270
           L         F L  P+L    G  KM K+L   + L ++  S Y+  +    + D  V 
Sbjct: 225 LQRYYGQRPQFCLLLPILPGLDGVQKMSKSLHNTVNLTEDALSMYSKLE---KLPDNVVN 281

Query: 271 SFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMS 330
            +   LT     +ID +A L G    E +K +A +IT   HG   A  A   A +   + 
Sbjct: 282 QYLTLLT-----DID-LANLVGTP-RERQKRMAFQITANWHGDAAASAAQLDAAKLV-VG 333

Query: 331 IHS----QHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISN 386
           I      Q++  +S+  +EV        L+   G   S++EARR ++   ++++      
Sbjct: 334 IAGIELKQNLKEVSL--NEVKFPAKAFYLLSAVGICASSSEARRKIQGGGVRLD-----G 386

Query: 387 EKLQIKLQDF----DSTGNIKLSFGKK 409
           EK+    Q+F    D +G + L  GKK
Sbjct: 387 EKIIDPNQEFAKASDLSGKV-LQLGKK 412


>gi|109096144|ref|XP_001085644.1| PREDICTED: tyrosyl-tRNA synthetase, mitochondrial-like [Macaca
           mulatta]
          Length = 220

 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 62/212 (29%), Positives = 100/212 (47%), Gaps = 13/212 (6%)

Query: 215 RLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAK 274
           RL    +F +T PL+T+ +G K+GK+   A+WLN++ TSP+  +Q++    D  V  + K
Sbjct: 3   RLTGEDVFGITVPLITSTTGAKLGKSAGNAVWLNRDKTSPFELYQFFVRQPDDSVERYLK 62

Query: 275 RLTTLPMSEIDRMAKLQGKEINE--AKKIIATEITTMVHGREEAEKAATAAMECFDMSIH 332
             T LP+ EID + +L  KE     A+K +A E+T +VHGRE  + A       +  SI 
Sbjct: 63  LFTFLPLPEIDHIMQLHVKEPERRGAQKRLAAEVTKLVHGREGLDSAKRCTQALYHSSID 122

Query: 333 S------QHMPTI----SISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNS 382
           +      Q +  +      S+  +  G  +L    KA          R +    + IN+ 
Sbjct: 123 ALEVMSDQELKELFKEAPFSELFLDPGTSVLDTCRKANAIPDGPRGYRMITEGGVSINHR 182

Query: 383 IISN-EKLQIKLQDFDSTGNIKLSFGKKNHII 413
            ++N E + +  Q     G   L  GK+N  I
Sbjct: 183 QVTNPESVLVVGQHILKNGLSLLKIGKRNFYI 214


>gi|149370495|ref|ZP_01890184.1| tyrosyl-tRNA synthetase [unidentified eubacterium SCB49]
 gi|149356046|gb|EDM44603.1| tyrosyl-tRNA synthetase [unidentified eubacterium SCB49]
          Length = 401

 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/234 (29%), Positives = 111/234 (47%), Gaps = 18/234 (7%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G+D TA  LH GH   L  L   Q  GH+ I L+G  T+ IGDP+ +++SR+ +  +E+
Sbjct: 38  LGFDPTAPDLHLGHAVVLKKLKEFQDLGHQVIILVGDFTARIGDPTGKNKSRKPLTIKEV 97

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           Q N        S  I     K   ++ N+E WL  + + +++ +I S  +V +++     
Sbjct: 98  QHNAATYIKQLSKIIDIDKVK---IVFNSE-WLDKLSFTEVI-QILSKVTVAQLMHRNDF 152

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R      ++  E  Y ILQ +D VE+  +    ++MGG+DQ  N   G  L E  K  
Sbjct: 153 NKRFTENTPIAMHELVYPILQGFDSVEIKAD----IEMGGTDQLFNCTMGRKLQENFKMD 208

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLN--------KEMTSPYNFWQYWRNI 264
               +  PLL    G  KM K+L+  I L         K M+ P +  + + N+
Sbjct: 209 PQIVMCMPLLKGLDGKEKMSKSLNNIIGLTDDAKDMFGKTMSIPDSLIEEFLNL 262


>gi|257069983|ref|YP_003156238.1| tyrosyl-tRNA synthetase [Brachybacterium faecium DSM 4810]
 gi|256560801|gb|ACU86648.1| tyrosyl-tRNA synthetase [Brachybacterium faecium DSM 4810]
          Length = 416

 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 94/360 (26%), Positives = 159/360 (44%), Gaps = 20/360 (5%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G DLTA  LH GH   L ++  LQ  GH  I L+G  TS IGDP+ R  +R ++  ++I+
Sbjct: 55  GVDLTAPDLHLGHAVNLWMMRVLQDQGHTVIFLLGDTTSRIGDPTGRSTTRPVLTEEQIR 114

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALML-NNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           EN E      +  ++    + + L +  N  W   +    LLRE+ S  +   ++S +  
Sbjct: 115 ENAESFLAQVTRVLR---SEPELLRIRRNSEWFDEMGVPGLLREL-SLVTHAHLVSRDMF 170

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL----GER 215
           R+RL     ++  E  Y +LQ +D V L    D  L + G+DQ  N   G +L    G+R
Sbjct: 171 RARLAAGSEIAMHELIYPVLQGFDSVAL----DSDLTIVGTDQLFNEAMGRELQVKHGQR 226

Query: 216 LKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKR 275
            +T  + +  +P L    G K  K+L   + L     SP   +     + D  V ++A+ 
Sbjct: 227 PQT-VITSTVTPGLD--GGPKQSKSLGNYVPL---CASPGEKFGRLMTLQDELVGTWARV 280

Query: 276 LTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQH 335
            T LP+++   + +        A +    ++   V  R +   AA  + E F     +  
Sbjct: 281 YTDLPLAQCAELGRRA-DAGGAAARDAKLDLAEAVVRRHDGADAARHSREEFVRVFSAGE 339

Query: 336 MPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
            PT              L L++ A    S + ARR L   A+ + +S +   + ++ ++D
Sbjct: 340 RPTDMTPLPLEPGTRTALDLVLAARPELSRSAARRLLSGGAVTLEDSRLREAEEEVAVRD 399


>gi|297182498|gb|ADI18660.1| tyrosyl-tRNA synthetase [uncultured Acidobacteria bacterium
           HF4000_26D02]
          Length = 411

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 92/363 (25%), Positives = 166/363 (45%), Gaps = 22/363 (6%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G+D TA  LH GH   +  +   Q  GH  I L+G  T +IGDP+ R ++R  +   EI
Sbjct: 46  VGFDPTAPDLHLGHTVLIRKMKHFQDLGHTIIFLIGDFTGLIGDPTGRSKTRPPLSRAEI 105

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
            EN E  K     F      +T  ++  N  WL ++   + +R + + ++V +ML     
Sbjct: 106 DENAETYK--RQVFALLDPART--VVEFNSRWLGALTSEEWIR-LAARYNVAQMLERRDF 160

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
           R R  +   ++  EF Y + QAYD V L  +    +++GG+DQ  N+  G D+       
Sbjct: 161 RQRYDKGLPIAIHEFLYPLAQAYDSVRLKAD----VELGGTDQLFNLNVGRDIMPAFGVG 216

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               +T PLL    G  KM K+    + + +    P   +    +I D  + S+ + LT 
Sbjct: 217 PQVVMTIPLLVGLDGVEKMAKSAGNYVGITE---PPDEMFGKLMSISDVLMWSYYELLTD 273

Query: 279 LPMSEIDRM-AKLQGKEIN--EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQH 335
           L + EI  +  ++   +++    K  +   I T  H    + +AA  A   F+     + 
Sbjct: 274 LTVLEIGALKTRVAAGDLHPKRTKLDLGRRIVTDFH----SAEAAAEAEREFERRFAGKA 329

Query: 336 MPT-ISISKDEV-SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL 393
           +P+ +     EV + G  L+ ++V  GFA S + A R +   +++++   +++   ++  
Sbjct: 330 LPSKLDGQVVEVPANGARLVAVLVDVGFAESNSAATRLIVQGSVRVDGERVTDRSHRVAA 389

Query: 394 QDF 396
             F
Sbjct: 390 VPF 392


>gi|187734653|ref|YP_001876765.1| tyrosyl-tRNA synthetase [Akkermansia muciniphila ATCC BAA-835]
 gi|187424705|gb|ACD03984.1| tyrosyl-tRNA synthetase [Akkermansia muciniphila ATCC BAA-835]
          Length = 393

 Score = 91.3 bits (225), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 76/273 (27%), Positives = 131/273 (47%), Gaps = 21/273 (7%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   +  L   Q+ GH+ + L+G  T+ IGDPS R  +R  +  +++
Sbjct: 37  LGVDPTAPDIHLGHTVAIEKLRQFQELGHQAVLLIGDFTATIGDPSGRSVTRPPLSREQV 96

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
            EN E       +F      KT+  ++ N  W   + Y ++L+ + S  ++ +ML+ E  
Sbjct: 97  LENAETYTK--QAFKILDRDKTE--IVYNGDWFRKMTYEEVLK-LNSRVTMQQMLAREDF 151

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
           ++R++  + +   E  Y I+Q +D VE+  +    +++GG+DQ  NI+ G DL +     
Sbjct: 152 KARVEGGKEVRLHEMQYPIMQGWDSVEIRAD----VELGGTDQLFNILVGRDLQKEEGML 207

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
              A+T PLL    G  KM K+    + +++   SP   +    +  D        R   
Sbjct: 208 PQIAMTMPLLEGLDGVRKMSKSYGNYVGVDE---SPEMMFGKMMSASD----ELMDRYYL 260

Query: 279 LPMSEIDRMAKLQGKEINEAKKIIATEITTMVH 311
           + + E   M    G    EAKK++A +IT   H
Sbjct: 261 VLLGEKRDM----GLHPMEAKKLLAWKITARYH 289


>gi|89899538|ref|YP_522009.1| tyrosyl-tRNA synthetase [Rhodoferax ferrireducens T118]
 gi|89344275|gb|ABD68478.1| tyrosyl-tRNA synthetase [Rhodoferax ferrireducens T118]
          Length = 414

 Score = 91.3 bits (225), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 96/358 (26%), Positives = 168/358 (46%), Gaps = 22/358 (6%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  L  LQ  GH  I L+G  T++IGDPS R+ +R  +  ++I
Sbjct: 53  LGLDPTAPDIHIGHTVVLNKLRQLQDLGHTVIFLIGDFTTLIGDPSGRNTTRPPLTREQI 112

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           + N +      S  +     KT+  +  N  W  ++    ++ E+ + ++V RM+     
Sbjct: 113 EVNAQTYYRQASMVLD--PSKTE--IRYNSEWGDTLGSRGMI-ELAAKYTVARMMERNDF 167

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R K    +S  EF Y ++Q YD V L  +    L++GG+DQ  N++ G  L       
Sbjct: 168 HDRFKSGTPISVHEFLYPLMQGYDSVALRSD----LELGGTDQKFNLLMGRHLQAEYGQE 223

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               LT PLL    G  KM K+    I ++++  +      + + +  +DV+ + +  T 
Sbjct: 224 PQCILTMPLLEGLDGIEKMSKSKGNYIAISEDANT-----MFAKCLSISDVLMW-RWYTL 277

Query: 279 LPMSEIDRMAKLQ-----GKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS 333
           L       +AKLQ     G+   +AK  +A EIT   H    AE A    +      +  
Sbjct: 278 LSFRSEADIAKLQAEVTAGRNPKDAKVALAKEITARFHSAAAAEAAEQDFVNRSRGGVPD 337

Query: 334 QHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
           + +  +++S  +    +G+  L+  AG A S+ E  R +    ++I+ S++S++ L++
Sbjct: 338 E-IAEVALSLGDGGAPLGIGALLKLAGLAASSGEGNRLIDGGGVRIDASVVSDKGLKL 394


>gi|116073605|ref|ZP_01470867.1| tyrosyl-tRNA synthetase [Synechococcus sp. RS9916]
 gi|116068910|gb|EAU74662.1| tyrosyl-tRNA synthetase [Synechococcus sp. RS9916]
          Length = 415

 Score = 90.1 bits (222), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 97/388 (25%), Positives = 162/388 (41%), Gaps = 47/388 (12%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D T S +H GH      L   Q  GH  + ++G  T+ IGDP+ +  +R  +  +++
Sbjct: 50  LGIDPTGSDIHLGHSILFRKLRAFQDAGHTAVLIIGDFTARIGDPTGKSATRVQLTKEQV 109

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALM----------LNNETWLCSIKYIDLLREIGSFFS 149
           + N       +   +  G  K  AL+            N  WL  +    ++  +G+  +
Sbjct: 110 ESNAT----TYLRQLGQGQPKEQALLDFETPGRLEVRRNSEWLEGLDLPQVIGLLGT-AT 164

Query: 150 VNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICG 209
           V +ML+ +    R      ++  EF Y +LQ YD V +    D  +++GG+DQ  N+  G
Sbjct: 165 VGQMLAKDDFSKRYGSGTPIALHEFLYPLLQGYDSVAV----DADVELGGTDQKFNVAMG 220

Query: 210 IDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDA- 267
            DL         F +  P+L    G  KM K+L   + L ++   P + +     + D  
Sbjct: 221 RDLQRHFGQRTQFGMLLPILVGLDGVQKMSKSLGNVVGLEED---PLSMYSKLEKVGDGA 277

Query: 268 --DVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAME 325
             D V+    L    + E  R          E +K +A  +T   HG + A KA T A  
Sbjct: 278 IDDYVTLLTDLDLETLPENPR----------EKQKAMALAVTASRHGNDAAAKAQTDAAS 327

Query: 326 CFDMSIHS-QHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSII 384
               S  +   +P  S++  EV+       L    G   S++EARR +K  A ++    I
Sbjct: 328 LVGGSGDAGADVPEASLA--EVNFPAKAFYLFSAVGICASSSEARRQIKGGAARLEGEKI 385

Query: 385 SNEKLQIKLQDFDSTGNIK---LSFGKK 409
           ++       Q+F S   ++   L  GKK
Sbjct: 386 TDPN-----QEFASAAELEGKVLQLGKK 408


>gi|304407892|ref|ZP_07389542.1| Tyrosine--tRNA ligase [Paenibacillus curdlanolyticus YK9]
 gi|304342911|gb|EFM08755.1| Tyrosine--tRNA ligase [Paenibacillus curdlanolyticus YK9]
          Length = 276

 Score = 89.7 bits (221), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 84/286 (29%), Positives = 136/286 (47%), Gaps = 30/286 (10%)

Query: 135 IKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCR 194
           + + D+L E+ S  +V RML  +    R    Q +   EF Y ++QAYD V L    +  
Sbjct: 1   MNFQDVL-ELASKLTVARMLERDDFAKRYGNSQPIHIHEFFYPLMQAYDSVSL----ESD 55

Query: 195 LQMGGSDQWGNIICGIDL-GERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMT 252
           +++GG+DQ  NI+ G  L G         A+  PLL    G  KM K+L   I +N+E  
Sbjct: 56  IEIGGTDQTFNILMGRTLQGAFGSKDGQVAILMPLLEGLDGVQKMSKSLGNYIGINEE-- 113

Query: 253 SPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK-LQGKEIN--EAKKIIATEITTM 309
            P   +    +I D  ++ + +  T++ + E+ ++ + LQ  +++  + K  +A  +  M
Sbjct: 114 -PNEIFGKTMSIPDELMLKYYELSTSITIEELQQLKQDLQAGDVHPRDVKVQLAKHLVRM 172

Query: 310 VHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLL--------TLIVKAGF 361
            HG    E+AA  A + F++    + +P      DE   G  LL         L+V  GF
Sbjct: 173 YHG----EQAAEQAEQHFNLVFQKRALPD---QIDEAHVGGELLEEGRISISKLLVTLGF 225

Query: 362 ATSTNEARRHLKSNAIKINNSII--SNEKLQIKLQDFDSTGNIKLS 405
           A ST+EARR +   A+KIN   +   NE + I+  D    G  K +
Sbjct: 226 AASTSEARRSVAQGAVKINEVKLLDPNESVVIQSGDIVQAGKRKFA 271


>gi|253687860|ref|YP_003017050.1| tyrosyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|251754438|gb|ACT12514.1| tyrosyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           carotovorum PC1]
          Length = 400

 Score = 89.7 bits (221), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 92/347 (26%), Positives = 154/347 (44%), Gaps = 23/347 (6%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G+D TA  LH GH   L  L   Q  GH  + ++G  T+ IGDP+ R++ R  +  ++I
Sbjct: 41  LGFDPTAPDLHLGHAVVLRKLKQFQDAGHDIVIIIGDFTAAIGDPTGRNKLRPPLSEKQI 100

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
             N +         I     +    +  N  W   + + +++  + S  ++ +M+  +  
Sbjct: 101 TLNSQTYLDQLGQIIDTSRIQ----VRRNSEWFRKMPFSEIIGLV-SRVTLAQMMQRDDF 155

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
           ++R      +   E  Y ILQ YD V +    +  +++GG+DQ  N + G  L E   + 
Sbjct: 156 KNRYAASSPIHLHELLYPILQGYDSVMI----NADIELGGTDQLFNNMVGRMLQESFGSE 211

Query: 220 KLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               +T PLL    G  KM K+    I L     SP + +    ++ D  ++S+    + 
Sbjct: 212 GQAVMTMPLLEGLDGKDKMSKSKGNYIALTD---SPEDIYGKIMSLPDHLIISYLTLASN 268

Query: 279 LPMSEI--DRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM 336
               +I   R    +GK     KK +A +I  + H  E    AA AA + F+  +  QH 
Sbjct: 269 ASEEDIIEAREQMERGKNPILLKKDLAHQIVGIYHDVE----AADAAGKHFE-RVFQQHN 323

Query: 337 PTISISKDEVSRGMGLLTLI---VKAGFATSTNEARRHLKSNAIKIN 380
           PT       +  G   LTLI    +A    S +E RR ++S A++IN
Sbjct: 324 PTEEDHLPLIVDGDVRLTLIDFCSQALAEMSRSELRRLIRSGAVRIN 370


>gi|227327362|ref|ZP_03831386.1| tyrosyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           carotovorum WPP14]
          Length = 400

 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 93/354 (26%), Positives = 155/354 (43%), Gaps = 23/354 (6%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G+D TA  LH GH   L  L   Q  GH  + ++G  T+ IGDP+ R++ R  +  ++I
Sbjct: 41  LGFDPTAPDLHLGHAVVLRKLKQFQDAGHDIVIIIGDFTASIGDPTGRNKLRPPLSEKQI 100

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
             N +         I      +   +  N  W   + + ++L  + S  ++ +M+  +  
Sbjct: 101 ALNSQTYLDQLGRIID----TSRIQVRRNSDWFKKMPFSEILGLV-SRVTLAQMMQRDDF 155

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
           ++R      +   E  Y ILQ YD V +    +  +++GG+DQ  N + G  L E   + 
Sbjct: 156 KTRYAASSPIHLHELLYPILQGYDSVMI----NADIELGGTDQLFNNMVGRMLQESFGSE 211

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               +T PLL    G  KM K+    I L     SP   +    ++ D  ++S+    T 
Sbjct: 212 GQSVITMPLLEGLDGKDKMSKSKGNYIALTD---SPEEMYGKIMSLPDHLIISYFSLATN 268

Query: 279 LPMSEI--DRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM 336
           +    I   R    +GK     KK +A +I  + H  E    AA AA + F+  +  +H 
Sbjct: 269 VSAEYIIEVREQMERGKNPILIKKDLAHQIVGIYHDAE----AADAAGKHFE-RVFQRHN 323

Query: 337 PTISISKDEVSRGMGLLTLI---VKAGFATSTNEARRHLKSNAIKINNSIISNE 387
           PT       +  G   L LI    +A    S +E RR ++S A++IN    ++E
Sbjct: 324 PTEEDHLPLIVDGQAPLALIDFCSQALADMSRSELRRLIRSGAVRINTHKETDE 377


>gi|256423053|ref|YP_003123706.1| tyrosyl-tRNA synthetase [Chitinophaga pinensis DSM 2588]
 gi|256037961|gb|ACU61505.1| tyrosyl-tRNA synthetase [Chitinophaga pinensis DSM 2588]
          Length = 433

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 101/209 (48%), Gaps = 10/209 (4%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G+D TA  LH GH   L  L   Q  GH+ + ++G  T+ IGDP+ +++SR+ +  +E+
Sbjct: 69  LGFDPTAPDLHLGHAVVLKQLRAFQDLGHQVVIIVGSFTAQIGDPTGKNKSRKPLSKEEV 128

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
             N +      +  I   T K   L   N TWL  + + ++L ++ S  +V ++L     
Sbjct: 129 LANADTYIRQLAKIID--TNKCQILF--NGTWLDKLSFPEIL-QLLSKVTVAQLLHRNDF 183

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R      ++  E  Y ILQ +D V++    +  ++MGG+DQ  N   G  L E    P
Sbjct: 184 NKRFTENVPIAMHELMYPILQGFDSVQI----NADIEMGGTDQLFNCTMGRQLQEAHGLP 239

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWL 247
               +  PLL    G  KM K+L+  I L
Sbjct: 240 PQVVMCMPLLRGLDGKEKMSKSLNNIIGL 268


>gi|153820322|ref|ZP_01972989.1| tyrosyl-tRNA synthetase [Vibrio cholerae NCTC 8457]
 gi|126509136|gb|EAZ71730.1| tyrosyl-tRNA synthetase [Vibrio cholerae NCTC 8457]
          Length = 311

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 74/283 (26%), Positives = 130/283 (45%), Gaps = 15/283 (5%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  L   Q  GH    L+G  T ++GDP+ ++ +R  +  +++
Sbjct: 38  LGADPTAPDIHLGHTVILNKLRTFQDLGHDVTFLIGDFTGMVGDPTGKNTTRPPLTREDV 97

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
             N E  K      +     K   +  N+E WL  +    ++R + S  +V RML  +  
Sbjct: 98  LRNAETYKQQVFKILDPAKTK---IQFNSE-WLSKLGAEGMIR-LASNQTVARMLERDDF 152

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
           + R    Q ++  EF Y +LQ YD V +    +  +++GG+DQ  N++ G +L +     
Sbjct: 153 KKRYNNGQPIAIHEFMYPLLQGYDSVAM----ETDVELGGTDQKFNLLMGRELQKANGQK 208

Query: 220 KLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
               L  PLL    G  KM K+    I +++   +P   +    +I D  + S+ + L+ 
Sbjct: 209 PQVVLMMPLLVGLDGEKKMSKSAHNYIGVSE---APSEMFGKIMSISDDLMWSYYELLSF 265

Query: 279 LPMSEIDRMAK--LQGKEINEAKKIIATEITTMVHGREEAEKA 319
            P+ E+ +       G    + K ++A EI    H + +A+ A
Sbjct: 266 RPLEEVAQFKAEVANGANPRDIKILLAKEIIARFHSQADADAA 308


>gi|148989918|ref|ZP_01821201.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae SP6-BS73]
 gi|147924703|gb|EDK75788.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae SP6-BS73]
          Length = 109

 Score = 87.8 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 43/103 (41%), Positives = 59/103 (57%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L ERG I Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  GHKP 
Sbjct: 7   LKERGLIFQTTDEEALRKALEEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAGHKPY 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFI 114
           +L+GG T +IGDPSF+D  R +     +   ++ I+G  S F+
Sbjct: 67  ALVGGATGLIGDPSFKDAERSLQTKDTVDGWVKSIQGQLSRFL 109


>gi|145635107|ref|ZP_01790813.1| tyrosyl-tRNA synthetase [Haemophilus influenzae PittAA]
 gi|145267715|gb|EDK07713.1| tyrosyl-tRNA synthetase [Haemophilus influenzae PittAA]
          Length = 220

 Score = 87.4 bits (215), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 60/202 (29%), Positives = 99/202 (49%), Gaps = 18/202 (8%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           ILSE   I ++   R L +          +G D TA  +H GH   L  L   Q+ GH+ 
Sbjct: 18  ILSEADLIEKLKENRPLKV---------KLGADPTAPDIHLGHTVVLNKLRQFQQLGHEV 68

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
             L+G  T ++GDPS ++ +R  +  +++  N E  K       K    +   ++ N+E 
Sbjct: 69  YFLIGDFTGMVGDPSGKNATRPPLSREDVLRNAETYK---EQIYKILDPQKTKIVFNSE- 124

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           WL  +    ++R + S ++V RML  +  + R    Q ++  EF Y +LQ YD V L   
Sbjct: 125 WLSKLGTEGMIR-LASNYTVARMLERDDFKKRFGNNQPIAIHEFIYPLLQGYDSVAL--- 180

Query: 191 YDCRLQMGGSDQWGNIICGIDL 212
            D  +++GG+DQ  N++ G +L
Sbjct: 181 -DADVELGGTDQKFNLLVGREL 201


>gi|26350695|dbj|BAC38984.1| unnamed protein product [Mus musculus]
          Length = 222

 Score = 87.4 bits (215), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 47/142 (33%), Positives = 73/142 (51%), Gaps = 7/142 (4%)

Query: 37  TAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRS 96
           T Y G+D T  SLH GHL  L+ LF  Q+ GH  I+L+GG T+++GDPS R + R  + +
Sbjct: 70  TVYCGFDPTGDSLHVGHLLTLLGLFHFQRAGHNVIALVGGSTALLGDPSGRTKGREALSA 129

Query: 97  QEIQEN-------IEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFS 149
           + ++ N       +E +    +     G       +L+N  W      +D L  +G  F 
Sbjct: 130 KCVRANAHALRRGLEALAANHARLFADGRPWGSFTVLDNAAWFQEQHLVDFLATVGGHFR 189

Query: 150 VNRMLSFESVRSRLKREQSLSF 171
           +  +LS  SV+SRLK  + +S 
Sbjct: 190 MGTLLSRLSVQSRLKSPEGMSL 211


>gi|407269|gb|AAA03403.1| unknown [Mycoplasma genitalium]
          Length = 81

 Score = 87.0 bits (214), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 40/80 (50%), Positives = 59/80 (73%), Gaps = 2/80 (2%)

Query: 122 DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA 181
           D ++  N+ WL  + YI+++RE+G+FFSVN+MLS ++  +R   E+ L+ +E NYMILQA
Sbjct: 3   DVIIHENKVWLEKLNYIEVIRELGAFFSVNKMLSTDAFSARW--EKGLTLMELNYMILQA 60

Query: 182 YDFVELAKNYDCRLQMGGSD 201
           YDF  L KN++  LQ+GGSD
Sbjct: 61  YDFYYLHKNHNVTLQIGGSD 80


>gi|311252791|ref|XP_003125269.1| PREDICTED: LOW QUALITY PROTEIN: tyrosyl-tRNA synthetase,
           mitochondrial-like [Sus scrofa]
          Length = 383

 Score = 86.3 bits (212), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 80/296 (27%), Positives = 128/296 (43%), Gaps = 37/296 (12%)

Query: 144 IGSFFSVNRMLSFESVRSRLKREQSLSFL--------------EFNYMILQAYDFVELAK 189
           +G+ + + R+   E+VR  +     LS L              EF   +LQ  DF     
Sbjct: 93  LGALYQMQRLSFLEAVRGHIHTGTLLSPLSLQTRLPTGKPRRQEFR-QVLQLPDFY---- 147

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
               R+ +GGSDQ  +II G +   +L    +F ++ PL+TT   TK  K+   AIWLN+
Sbjct: 148 ----RVPLGGSDQLSHIISGYEFIHKLAGEGIFTVSIPLITTR--TKQXKSTLNAIWLNR 201

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINEAKKIIATEIT 307
             TS +     +    D  V S+ K +T LP  E+D + +L  K  E    +K +ATE+T
Sbjct: 202 GKTSAFELCHSFVRQQDDLVESYLKLVTFLPFPELDHIMQLYVKDPEKKSCQKXLATEVT 261

Query: 308 TMVHGREEAEKAATAAMECFDMSIHS---------QHMPTISISKDEVSRGMGLLTLIVK 358
            +VHG+E  + A       +  SI +         + +   S S+  +  G  +L    K
Sbjct: 262 LLVHGQEGLDSAERYREALYHGSIDALKVMADQEEEFLKEASFSELVLDPGTSVLDTCYK 321

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISN-EKLQIKLQDFDSTGNIKLSFGKKNHII 413
           A            +    + IN+  ++N E + +  Q     G + L  GK+N  I
Sbjct: 322 ANATPHGPHGYWMITEGEVNINHRQVTNPESVLVLGQCILKNGFLLLKIGKRNFYI 377


>gi|289676245|ref|ZP_06497135.1| tyrosyl-tRNA synthetase [Pseudomonas syringae pv. syringae FF5]
          Length = 215

 Score = 86.3 bits (212), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 56/172 (32%), Positives = 88/172 (51%), Gaps = 9/172 (5%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   +  L   Q  GH+ I L+G  T +IGDPS +  +R  +  +++ 
Sbjct: 39  GFDPTAPDLHLGHTVLINKLRQFQDLGHQIIFLIGDFTGMIGDPSGKSATRPPLTREQVL 98

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           +  E  K     F      KT+     N TW+  +   D +R + S ++V RML  +   
Sbjct: 99  DYAETYKS--QVFKILDPAKTEVAF--NSTWMDQLSPADFIR-LSSQYTVARMLERDDFD 153

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL 212
            R K  QS++  EF Y ++Q YD V L  +    +++GG+DQ  N++ G +L
Sbjct: 154 KRYKSNQSIAIHEFLYPLVQGYDSVALKAD----VELGGTDQKFNLLMGREL 201


>gi|222870026|gb|EEF07157.1| predicted protein [Populus trichocarpa]
          Length = 351

 Score = 86.3 bits (212), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 67/233 (28%), Positives = 110/233 (47%), Gaps = 19/233 (8%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  +  LQ  GH+ I L+G  T++IGDPS R+ +R  + +++I
Sbjct: 53  LGLDPTAPDIHLGHTVVLNKMRQLQDLGHQVIFLIGDFTTLIGDPSGRNSTRPPLTAEQI 112

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           + N E     ++   K        +  N+E W   +    ++ E+ + ++V RM+     
Sbjct: 113 KVNAET---YYTQAAKVLDPARTEVRYNSE-WCDKLGARGMI-ELSAKYTVARMMERNDF 167

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R     S+S  EF Y +LQ YD V L  +    L+MGG+DQ  N++ G  L +     
Sbjct: 168 HQRFTDGSSISLHEFLYPLLQGYDSVALRAD----LEMGGTDQKFNLLMGRHLQQEYGQD 223

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYN---------FWQYWR 262
               LT PLL    G  KM K+ +  I + ++  + +           W +W+
Sbjct: 224 TQCVLTMPLLVGLDGEHKMSKSKNNYIGITEDANTMFAKVLSISDTLMWNWWK 276


>gi|126666488|ref|ZP_01737466.1| tyrosyl-tRNA synthetase [Marinobacter sp. ELB17]
 gi|126628876|gb|EAZ99495.1| tyrosyl-tRNA synthetase [Marinobacter sp. ELB17]
          Length = 241

 Score = 85.9 bits (211), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 97/209 (46%), Gaps = 10/209 (4%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   +  L   Q  GH+ I L+G  T +IGDPS +  +R  + S+++ 
Sbjct: 39  GFDPTAPDLHLGHTVLINKLRQFQDLGHEVIFLIGDFTGMIGDPSGKSATRPPLTSEQVA 98

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
            N    K     F      KT      N  W+  +   D++   G  ++V RML  +   
Sbjct: 99  ANAVTYKE--QVFKILDPAKTRVAF--NSEWMSKMSAADMIALAGQ-YTVARMLERDDFD 153

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            R    Q ++  EF Y ++Q YD V L  +    +++GG+DQ  N++ G  L +      
Sbjct: 154 KRYTGGQPIAIHEFLYPLIQGYDSVALKAD----VELGGTDQKFNLLMGRALQKNYGQKP 209

Query: 221 LFALTSPLLTTASGT-KMGKTLSGAIWLN 248
              LT P+L    G  KM K+L   + +N
Sbjct: 210 QVILTVPILEGLDGVQKMSKSLGNYVGVN 238


>gi|37524221|ref|NP_927565.1| tyrosyl-tRNA synthetase [Photorhabdus luminescens subsp. laumondii
           TTO1]
 gi|81420551|sp|Q7N9W0|SYY2_PHOLL RecName: Full=Tyrosyl-tRNA synthetase 2; AltName:
           Full=Tyrosine--tRNA ligase 2; Short=TyrRS 2
 gi|36783644|emb|CAE12496.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
           TTO1]
          Length = 399

 Score = 85.9 bits (211), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 82/350 (23%), Positives = 158/350 (45%), Gaps = 17/350 (4%)

Query: 36  VTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMR 95
           +T  +G+D TA  LH GH   L  L   Q  GH+ + ++G  T+ IGDP+ R++ R  + 
Sbjct: 35  LTIKLGFDPTAPDLHLGHAVVLQKLKDFQDEGHRIVVIIGDFTAGIGDPTGRNKLRPPLT 94

Query: 96  SQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLS 155
            ++I +N +      +  I       +  +  N  W  ++ + ++++ I S  ++ +++ 
Sbjct: 95  PEQINKNSQTYINQLAKVINI----ENIEIRKNSEWFNNMPFSNVIKLI-SKITLAQIMH 149

Query: 156 FESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER 215
            +  ++R + +  +   E  Y ILQ YD V +    D  +++GG+DQ  N + G  L E 
Sbjct: 150 RDDFKTRFESKAPVHLHEIIYPILQGYDSVMI----DADIELGGTDQLFNNLVGRTLQEA 205

Query: 216 LKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAK 274
            +      +T PLL    G  KM K+ +  I L        + +    +I D+ ++++  
Sbjct: 206 YEKKGQIVITMPLLEGLDGIEKMSKSKNNYIGLTDNAN---DMYGKVMSIPDSVIINYLT 262

Query: 275 RLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQ 334
             T +   +   +       +N  K  I  +I   +  R   + +A  A E F+  +  +
Sbjct: 263 LATDMEAEKQSAIVSQLELGLNPMK--IKKDIAYNIVKRYHDDISAKEATEHFERVVQKR 320

Query: 335 HMPTISISKDEVSRG--MGLLTLIVKAGFATSTNEARRHLKSNAIKINNS 382
                      + +G  + LL L   A  A S +E RR ++S A++++ S
Sbjct: 321 TPEEADHDVLILPKGSYITLLDLCSVALPAISRSELRRLIRSGAVRVDKS 370


>gi|253987623|ref|YP_003038979.1| tyrosyl-tRNA synthetase [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|253779073|emb|CAQ82233.1| tyrosyl-trna synthetase 2 [Photorhabdus asymbiotica]
          Length = 399

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 89/358 (24%), Positives = 162/358 (45%), Gaps = 23/358 (6%)

Query: 36  VTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMR 95
           +T  +G+D TA  LH GH   L  L   Q  GH+ + ++G  T+ IGDP+ R++ R  + 
Sbjct: 35  LTIKLGFDPTAPDLHLGHSVVLQKLKDFQDEGHRIVVIIGDFTAGIGDPTGRNKLRPPLT 94

Query: 96  SQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLS 155
            ++I +N +      +  I       +  +  N  W  ++ + ++++ I S  ++ +++ 
Sbjct: 95  LEQINKNSQTYINQLAKVINI----ENIEIRKNSEWFSNMPFSNVIKLI-SKITLAQIMH 149

Query: 156 FESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER 215
            +  ++R + +  +   E  Y ILQ YD V +    D  +++GG+DQ  N + G  L E 
Sbjct: 150 RDDFKTRFESKSPVHLHEIIYPILQGYDSVMI----DADIELGGTDQLFNNLVGRTLQEA 205

Query: 216 LKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSF-- 272
            +      +T PLL    G  KM K+ +  I L        + +    +I D+ ++++  
Sbjct: 206 YEKKGQIVITMPLLEGLDGIEKMSKSKNNYIGLTDNAN---DMYGKVMSIPDSVIINYLT 262

Query: 273 -AKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSI 331
            A  +     S I    +L G    + KK IA  I    H    A++AA    E F+  +
Sbjct: 263 LATDMEAEKQSAIVSQLEL-GLNPMKVKKDIAYNIVKRYHDDISAKEAA----EHFERVV 317

Query: 332 HSQHMPTISISKDEVSRG--MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNE 387
             +           + +G  + LL L   A    S +E RR ++S A++++ S   NE
Sbjct: 318 QKRTPEEADHDVLILPKGSYITLLDLCSVALPTISRSELRRLIRSGAVRVDKSKEDNE 375


>gi|254448516|ref|ZP_05061976.1| tyrosyl-tRNA synthetase [gamma proteobacterium HTCC5015]
 gi|198261899|gb|EDY86184.1| tyrosyl-tRNA synthetase [gamma proteobacterium HTCC5015]
          Length = 273

 Score = 84.3 bits (207), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 69/243 (28%), Positives = 121/243 (49%), Gaps = 15/243 (6%)

Query: 149 SVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIIC 208
           +V RML  +  + R    QS++  EF Y ++Q +D V L  +    +++GG+DQ  N++ 
Sbjct: 17  TVARMLERDDFKKRYTSGQSIAIHEFLYPLVQGWDSVALKAD----IELGGTDQKFNLLM 72

Query: 209 GIDLG-ERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDD 266
           G +L  E  ++P++  +T PLL    G  KM K+L   I +++   SP + +    +I D
Sbjct: 73  GRELQREEGESPQV-VITMPLLEGLDGVQKMSKSLGNYIGIDE---SPDDIFGKVMSISD 128

Query: 267 ADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAM 324
             +  + + L+  P+ E+   R    +G    + K  +A E+    H +E AE+A    +
Sbjct: 129 ELMWRYFELLSFRPLDEVVQLRADVEKGANPRDIKFQLAEELIARFHSQEAAEQAREQFV 188

Query: 325 ECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSII 384
             F      Q M  + I    V  G+GL  L+  A    ST++A R +K  A+KI+   +
Sbjct: 189 ARFQKGAMPQEMDELEIP---VGEGLGLPALLKAAKLCPSTSDAMRMIKQGAVKIDGEKV 245

Query: 385 SNE 387
           +N+
Sbjct: 246 ANK 248


>gi|297172370|gb|ADI23345.1| tyrosyl-tRNA synthetase [uncultured Oceanospirillales bacterium
           HF0770_27O18]
          Length = 212

 Score = 82.8 bits (203), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 51/169 (30%), Positives = 87/169 (51%), Gaps = 9/169 (5%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   +  L   Q+ GH  + L+G  T +IGDP+ +  +R  +  +EI+
Sbjct: 39  GFDPTAPDLHLGHTVLINKLRQFQELGHHVMFLIGDFTGMIGDPTGKSATRPPLTPEEIE 98

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
            N E  K     F      KT+ +   N TW+  +    +++ + S ++V RML  +   
Sbjct: 99  RNAETYKE--QVFKILDPEKTEVVF--NSTWMNQVGAAGMIK-LASQYTVARMLERDDFD 153

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICG 209
            R +  Q ++  EF Y ++Q YD V +    +  +++GG+DQ  N++ G
Sbjct: 154 KRYRANQPIAVHEFLYPLVQGYDSVAM----EADVELGGTDQKFNLLMG 198


>gi|70938703|ref|XP_739992.1| tyrosine--tRNA ligase [Plasmodium chabaudi chabaudi]
 gi|56517390|emb|CAH79524.1| tyrosine--tRNA ligase, putative [Plasmodium chabaudi chabaudi]
          Length = 254

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 63/221 (28%), Positives = 101/221 (45%), Gaps = 27/221 (12%)

Query: 202 QWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL-----SGAIWLNKEMTSPYN 256
           QWGNI  GI+  + +   +L+ LT+ LL   +  K  K+L        IW+NKE T PY 
Sbjct: 1   QWGNIQSGIEFCQNIYNQQLYGLTTNLLLYKNNMKFSKSLFYENKKLPIWINKEYTPPYL 60

Query: 257 FWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE-------------INEAKKIIA 303
           FW + RN++D  V S+   LT L ++ +D   K    E             IN AKK +A
Sbjct: 61  FWNFLRNVEDQKVQSYIDMLTNLNIN-LDEELKKSDHESSKNRNISSYDNIINSAKKQMA 119

Query: 304 TEITTMVHGREEAEK----AATAAMECFDMSIHSQH---MPTISISKDEVSRGMGLLTLI 356
             IT  ++G+    K            F+   + Q    +P   I+ + + +    +T +
Sbjct: 120 DHITNTIYGKSVINKIHKINNIIKNNQFNEIENLQELKILPYNQININSIKQNEINITDV 179

Query: 357 VK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
           +K    A +  EA+  +  N I IN  +I++ K  + + DF
Sbjct: 180 LKFFQIAMTNKEAKEKINQNCIYINTKLITDPKYVLTITDF 220


>gi|311894756|dbj|BAJ27164.1| putative tyrosyl-tRNA synthetase [Kitasatospora setae KM-6054]
          Length = 471

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 98/405 (24%), Positives = 176/405 (43%), Gaps = 51/405 (12%)

Query: 28  DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFR 87
           ++L     +T   G D T + +H GH   ++L   LQ+ GH+ + L+G  T+ IGDPS R
Sbjct: 74  ELLAEGRPLTVKFGIDPTGAEVHLGHAVPMILASRLQRMGHRVVFLVGDITARIGDPSGR 133

Query: 88  DESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSF 147
              R  +   +++ N+   +    +F  +   +      N+E WL  +     L E+ + 
Sbjct: 134 SAERPPLTEDDVRRNVATYRQQVGAFFDFERAE---FRFNSE-WLEPMTLPRFL-EVLAR 188

Query: 148 FSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNI- 206
              +  L  E  R+RL     L+  E  Y ++ A D VEL    D  +++GG DQ  N+ 
Sbjct: 189 LPASAALQREDFRNRLAEGSGLTLAELVYSVVMALDSVEL----DADVELGGLDQLLNLQ 244

Query: 207 ICGIDLGERLKTPKLFALTSPLL--TTASGTKMGKTLS---GAIWLNKEMTSPYNFWQYW 261
           +C   +    + P++  L + L+  T  +G KM K+ +   G  +  +EM        + 
Sbjct: 245 MCRRVMTATGRQPEVV-LATGLIEGTDGTGAKMSKSRNNYVGLAFPAEEM--------FG 295

Query: 262 RNIDDAD--VVSFAKRLT-------TLPMSEIDRMAKLQGKEINEA-KKIIATEITTMVH 311
           R +  AD  +  + + LT        L ++++D      G+    A K ++A  +T  VH
Sbjct: 296 RLMSCADRLLPGYLRALTELLDEEIDLLLAQVD-----DGRRHPMAVKTLLAAAVTATVH 350

Query: 312 GREEAEKAATAAMEC----FDMSIHSQHMPTISISKDEVSRGMGLLT--LIVKAGFATST 365
           G    E AA AA +     F +  +SQ  P  ++  D    G   L   L+  +G   S 
Sbjct: 351 G----EPAALAARDSFRARFSVRRYSQAGPLPTV--DPAEHGAATLGELLVRVSGELPSL 404

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
           N+ RR  ++  ++         +  + L   D+   +++  G  +
Sbjct: 405 NQVRRVAEAGGLRFVVEHTDGGQQTVPLGRDDADERLRVVLGAHD 449


>gi|325528756|gb|EGD05818.1| tyrosyl-tRNA synthetase [Burkholderia sp. TJI49]
          Length = 299

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 69/275 (25%), Positives = 136/275 (49%), Gaps = 22/275 (8%)

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W   +   D + ++ S ++V R+L  E    R +    +S  EF Y ++Q YD V L
Sbjct: 25  NSEWSMPLG-ADGMIKLASRYTVARILEREDFTKRFQGGVPISIHEFLYPLMQGYDSVAL 83

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIW 246
               +  L++GG+DQ  N++ G +L ++    +   LT PLL    G  KM K+    + 
Sbjct: 84  ----NADLELGGTDQKFNLLVGRELQKQYGQEQQCILTMPLLEGLDGVEKMSKSKGNYVG 139

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIAT 304
           ++++   P + +    +I D  +  + + L+   M EI   R     G+   + K ++A 
Sbjct: 140 ISEK---PTDMFGKLMSISDTLMWRYFELLSFRSMDEIAGFRREAEGGRNPRDFKVLLAQ 196

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHS---QHMPTISISKDEVSRGMGLLTLIVKAGF 361
           EI    H + +AE+A    +E F+          +P+++++   ++ G     L+ +AG 
Sbjct: 197 EIVARFHSQADAERA----LEDFNHRAKGGVPDDIPSVTLAGAPLAIGQ----LLKQAGL 248

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
             ST+EA R+++   +KI+ + +S++ L+++  +F
Sbjct: 249 VPSTSEALRNIEQGGVKIDGATVSDKALKVEAGEF 283


>gi|195155049|ref|XP_002018419.1| GL17697 [Drosophila persimilis]
 gi|194114215|gb|EDW36258.1| GL17697 [Drosophila persimilis]
          Length = 337

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 50/203 (24%), Positives = 101/203 (49%), Gaps = 13/203 (6%)

Query: 197 MGGSDQWGNIICGIDLGERLKTPK-LFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPY 255
           +   DQ GN++ G +L  R++  + +F +T P++T   G K GK+   A+WL++  TSP+
Sbjct: 103 IAAPDQTGNLMTGHELISRVERKREVFGMTLPIVTNEEGDKFGKSAGNAVWLDENKTSPF 162

Query: 256 NFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN--EAKKIIATEITTMVHGR 313
             +Q++  + D++     K  T +P+ EI+++ +   KE    +A+ ++A ++T +VHG 
Sbjct: 163 ALYQFFLRMPDSEAEKLLKLFTFIPLPEIEQLMQEHEKEPEKRKAQTLLAEDVTLLVHGE 222

Query: 314 ---EEAEKAATA-------AMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
              ++AE+   A        +   + +   Q     ++       GM +L L +KA    
Sbjct: 223 NGLKQAERVTNALYKGKVDGLAELNYAEIKQTFQGAAVVDLLTEPGMSILQLAMKAKCFP 282

Query: 364 STNEARRHLKSNAIKINNSIISN 386
           +  +A R + +    +N   + N
Sbjct: 283 TETDAVRIINAGGFYVNQKRVQN 305



 Score = 66.2 bits (160), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 35/103 (33%), Positives = 58/103 (56%), Gaps = 6/103 (5%)

Query: 12  LSERGFIHQI---SNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L++RGF   I   +   ++  L + G  + Y G+D TA SLH G+L  +M L   Q+ GH
Sbjct: 31  LTDRGFFQGIFPDTAAPKIKQLFTSGQQSIYAGFDPTADSLHVGNLLVIMGLLHCQRAGH 90

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFS 111
           +PI+L+GG T +I  P   D++  +M   E+   +E+ + +F 
Sbjct: 91  RPIALVGGATGLIAAP---DQTGNLMTGHELISRVERKREVFG 130


>gi|11066479|gb|AAG28601.1|AF247185_1 tyrosyl tRNA synthetase [Rhizobium etli]
          Length = 64

 Score = 80.9 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 38/64 (59%), Positives = 47/64 (73%)

Query: 1  MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
          M  FKSDFL  L ERGFIHQ+S+   LD L ++ VVTAY+GYD TA+SLH G+L    +L
Sbjct: 1  MSEFKSDFLRTLKERGFIHQVSDESGLDDLFAKEVVTAYVGYDATATSLHIGNLISATML 60

Query: 61 FWLQ 64
          +WLQ
Sbjct: 61 YWLQ 64


>gi|254431353|ref|ZP_05045056.1| tyrosyl-tRNA synthetase [Cyanobium sp. PCC 7001]
 gi|197625806|gb|EDY38365.1| tyrosyl-tRNA synthetase [Cyanobium sp. PCC 7001]
          Length = 437

 Score = 80.1 bits (196), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 96/391 (24%), Positives = 172/391 (43%), Gaps = 50/391 (12%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D T + +H GH      L   Q  GH  + ++G  T+ IGDP+ +  +R  + + E+
Sbjct: 68  LGIDPTGADIHLGHSLLFRKLRAFQDAGHTAVLIIGDFTARIGDPTGKSSTRVQLSAAEV 127

Query: 100 QENIEKIKGIFSSFIKYGTGKT-DALMLNNET-----------WLCSIKYIDLLREIGSF 147
           + N E      +  ++ G G++ D  +L+ ET           WL  +    ++  +G+ 
Sbjct: 128 EANAE------TYLLQLGLGQSRDQSLLDFETPGRLEVRRNSEWLAGLALPQVIELLGT- 180

Query: 148 FSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNII 207
            +V +ML+ +    R      +S  EF Y +LQ YD V +  +    +++GG+DQ  N+ 
Sbjct: 181 STVGQMLAKDDFSKRYGSGTPISLHEFLYPLLQGYDSVAIQAD----VELGGTDQKFNVA 236

Query: 208 CGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDD 266
            G DL         F L  P+L    G  KM K+L   + L ++   P + +     + D
Sbjct: 237 MGRDLQRHFGQRPQFGLLLPILPGLDGVQKMSKSLGNTVGLRED---PLSMYSKLEKVPD 293

Query: 267 ADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHG----REEAEKAATA 322
           A V ++   LT L +  +    +       E +K +A +IT   HG     +    AAT 
Sbjct: 294 AVVDTYLTLLTDLDLRALPPNPR-------ERQKAMALDITRQRHGASAADQAQRDAATL 346

Query: 323 AMECFDMSIHSQHMPTISISK-DEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINN 381
                     +  +P  S++  +  +R   LL+ +   G   S++EARR ++   ++++ 
Sbjct: 347 VGAAAGQHAAAAAVPEASLAAVNFPARAFYLLSAL---GLCGSSSEARRQIQGGGVRLDG 403

Query: 382 SIISNEKLQIKLQDFDSTGNIK---LSFGKK 409
                 KL    Q F S  +++   +  GKK
Sbjct: 404 V-----KLVDPNQTFASAADLEGKVIQLGKK 429


>gi|33322947|gb|AAQ07210.1|AF496518_1 tyrosyl-tRNA synthetase 1 [Lactobacillus delbrueckii subsp. lactis]
          Length = 69

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 36/66 (54%), Positives = 45/66 (68%), Gaps = 2/66 (3%)

Query: 194 RLQMGGSDQWGNIICGIDLGERLKTPK--LFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
           ++Q+GG+DQWGNI  GIDL  RL+      F LT PL+  A GTK GK+  GA+WL+ E 
Sbjct: 4   QMQIGGADQWGNITAGIDLIHRLEGADRPAFGLTIPLMLKADGTKFGKSAGGAVWLDPEK 63

Query: 252 TSPYNF 257
           TSPY F
Sbjct: 64  TSPYEF 69


>gi|76664846|emb|CAJ17860.1| tyrosyl-tRNA synthetase [Candidatus Phytoplasma solani]
          Length = 200

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 51/173 (29%), Positives = 84/173 (48%), Gaps = 16/173 (9%)

Query: 226 SPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID 285
           +PLL  A+GTK GK+  G +WLN E TSPY  +QY+ ++ DA+++++ K LT +   EI 
Sbjct: 1   TPLLLNANGTKFGKSEQGVLWLNPEKTSPYEIYQYFLSVGDAEIINYLKTLTLISKKEIL 60

Query: 286 RMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECF----------DMSIHS 333
            + K  LQ  +    +  +A +I  +++  +  +         F          D  +  
Sbjct: 61  ELEKQTLQNPQKRLGQMALAKKIINLIYSPKVLQDCLKTNELLFSNKKKVLMQEDFLLLE 120

Query: 334 QHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISN 386
           + +   S   D +     L+  +VK    TS +EAR  +K  +IKI N  I N
Sbjct: 121 KTLFCYSTQLDSI----FLVDALVKTKLTTSKSEAREFIKKGSIKIFNQQIKN 169


>gi|126640129|ref|YP_001083113.1| tyrosyl-tRNA synthetase [Acinetobacter baumannii ATCC 17978]
          Length = 324

 Score = 76.6 bits (187), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 73/310 (23%), Positives = 137/310 (44%), Gaps = 19/310 (6%)

Query: 80  IIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYID 139
           +IGDP+ +  +R  +  ++++ N +  +     F      KT      N  W       D
Sbjct: 1   MIGDPTGKSATRPPLSREQVEANAKTYQE--QVFKILDPNKTKVRF--NSEWFNQKSAAD 56

Query: 140 LLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGG 199
           L+ ++ S  +V+RML  +    R    Q ++  EF Y ++Q YD + L    +  +++GG
Sbjct: 57  LI-QLASQQTVSRMLERDDFTKRYNNHQPIAIHEFLYPLVQGYDSIAL----EADVELGG 111

Query: 200 SDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFW 258
           +DQ  N++ G  L  R        +T P+L    G  KM K+L   I +     +P   +
Sbjct: 112 TDQTFNLLMGRTLQSRYGQESQVCITVPILEGLDGVNKMSKSLGNYIGV---FDAPGAMY 168

Query: 259 QYWRNIDDADVVSFAKRLTTLPMSEI----DRMAKLQGKEINEAKKIIATEITTMVHGRE 314
           Q   ++ D+ +  +   L+   + EI    D +A   G+   E K+I+A E+    H  E
Sbjct: 169 QKVLSMPDSLIERYFDLLSFKSLDEIKALLDEIAA--GRNPQEVKRILALELVERFHDAE 226

Query: 315 EAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKS 374
            A  A  +A             P ++IS+ E    + + T++  AG   +   A+  +  
Sbjct: 227 AAANAHKSAGNRITEGEVPADTPEVTISRGEFGGEIFIATILRVAGLNPNAAAAKDAVAR 286

Query: 375 NAIKINNSII 384
            A+K++ +++
Sbjct: 287 GAVKVDWNVV 296


>gi|330955034|gb|EGH55294.1| tyrosyl-tRNA synthetase [Pseudomonas syringae Cit 7]
          Length = 182

 Score = 76.3 bits (186), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 49/147 (33%), Positives = 73/147 (49%), Gaps = 5/147 (3%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   +  L   Q  GH+ I L+G  T +IGDPS +  +R  +  +++ 
Sbjct: 39  GFDPTAPDLHLGHTVLINKLRQFQDLGHQIIFLIGDFTGMIGDPSGKSATRPPLTREQVL 98

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           +  E  K     F      KT+     N TW+  +   D +R + S ++V RML  +   
Sbjct: 99  DYAETYKS--QVFKILDPAKTEVAF--NSTWMDQLSPADFIR-LSSQYTVARMLERDDFD 153

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVEL 187
            R K  QS++  EF Y ++Q YD V L
Sbjct: 154 KRYKSNQSIAIHEFLYPLVQGYDSVAL 180


>gi|153825685|ref|ZP_01978352.1| tyrosyl-tRNA synthetase [Vibrio cholerae MZO-2]
 gi|149740622|gb|EDM54731.1| tyrosyl-tRNA synthetase [Vibrio cholerae MZO-2]
          Length = 232

 Score = 76.3 bits (186), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 52/181 (28%), Positives = 89/181 (49%), Gaps = 10/181 (5%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH   L  L   Q  GH    L+G  T ++GDP+ ++ +R  +  +++
Sbjct: 38  LGADPTAPDIHLGHTVILNKLRTFQDLGHDVTFLIGDFTGMVGDPTGKNTTRPPLTREDV 97

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
             N E  K      +     K   +  N+E WL  +    ++R + S  +V RML  +  
Sbjct: 98  LRNAETYKQQVFKILDPAKTK---IQFNSE-WLSKLGAEGMIR-LASNQTVARMLERDDF 152

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
           + R    Q ++  EF Y +LQ YD V +    +  +++GG+DQ  N++ G +L ++   P
Sbjct: 153 KKRYNNGQPIAIHEFMYPLLQGYDSVAM----ETDVELGGTDQKFNLLMGREL-QKANGP 207

Query: 220 K 220
           K
Sbjct: 208 K 208


>gi|327350731|gb|EGE79588.1| hypothetical protein BDDG_02529 [Ajellomyces dermatitidis ATCC
           18188]
          Length = 241

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 44/166 (26%), Positives = 81/166 (48%), Gaps = 12/166 (7%)

Query: 5   KSDFLSILSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           +  FL ++ ERG ++Q+   R+ L+ + ++  V  Y G D TA SLH GH+   M+L W 
Sbjct: 76  RKSFLELMEERGLVNQVIGDRDALNKMWTERRVGVYAGVDPTAPSLHVGHMLPFMVLAWA 135

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIE----KIKGIFSSFIKYGTG 119
              G + + L+GG T  +GDP+ R   R  M +   +EN+     ++K +  S  +Y   
Sbjct: 136 YVHGIRTVFLLGGSTGQVGDPTDRLAPRAKMAAVTRKENMANMHLQLKKLGMSIERYAAK 195

Query: 120 KT-------DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
                       ++NN +W     + ++++ +G    +  ML  ++
Sbjct: 196 HGYESEWIWRRAIVNNNSWWLKEPFFEVMKTMGEAVRLGPMLGRDT 241


>gi|153845945|ref|ZP_01993814.1| tyrosyl-tRNA synthetase 1 [Vibrio parahaemolyticus AQ3810]
 gi|149745022|gb|EDM56320.1| tyrosyl-tRNA synthetase 1 [Vibrio parahaemolyticus AQ3810]
          Length = 164

 Score = 74.3 bits (181), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 38/87 (43%), Positives = 51/87 (58%), Gaps = 6/87 (6%)

Query: 232 ASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL- 290
           + GTK GKT  GA+WL+   TSPY F+Q+W   +DADV  F +  T L   EI  +    
Sbjct: 2   SDGTKFGKTEGGAVWLDPSKTSPYAFYQFWLGAEDADVYHFLRYYTFLSCEEIASIEAQD 61

Query: 291 ---QGKEINEAKKIIATEITTMVHGRE 314
              QGK   +A++I+A E+T  VHG E
Sbjct: 62  QASQGK--PQAQRILAEEMTRFVHGEE 86


>gi|325473315|gb|EGC76510.1| hypothetical protein HMPREF9353_02305 [Treponema denticola F0402]
          Length = 142

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 41/116 (35%), Positives = 68/116 (58%)

Query: 294 EINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLL 353
           +IN+AK+ +A E+T ++HG+EEAEKA   A   F    +   MPT ++S  +++ G+G++
Sbjct: 19  DINKAKERLAFEVTALIHGKEEAEKALEGARAAFSGGGNKDAMPTANLSLSKLNDGIGII 78

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
            L  +AG A++ ++ARR ++     IN   IS+ K  I  +  D    + L  GKK
Sbjct: 79  DLFAEAGLASTKSDARRLVEQGGAFINEEKISDIKAIIGKEKLDKDNEMILRAGKK 134


>gi|163802290|ref|ZP_02196184.1| tyrosyl-tRNA synthetase [Vibrio sp. AND4]
 gi|159173819|gb|EDP58633.1| tyrosyl-tRNA synthetase [Vibrio sp. AND4]
          Length = 262

 Score = 73.2 bits (178), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 64/244 (26%), Positives = 112/244 (45%), Gaps = 15/244 (6%)

Query: 149 SVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIIC 208
           +V RML  +  + R    Q ++  EF Y +LQ +D V +    +  +++GG+DQ  N++ 
Sbjct: 9   TVARMLERDDFKKRYAGGQPIAIHEFMYPLLQGWDSVAM----ETDVELGGTDQKFNLLM 64

Query: 209 GIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDA 267
           G +L +         L  PLL    G  KM K+    I +++   +P   +    +I D 
Sbjct: 65  GRELQKSHGQKPQVVLMMPLLVGLDGEKKMSKSSGNYIGISE---APSEMFGKIMSISDV 121

Query: 268 DVVSFAKRLTTLPMSEIDRM-AKLQ-GKEINEAKKIIATEITTMVHGREEAEKAATAAME 325
            + S+ + L+  P+ EI +  A ++ GK   + K ++A EI    H   +A+ A    + 
Sbjct: 122 LMWSYYELLSFRPLEEIAQFKADVEAGKNPRDIKVLLAKEIIARFHSEADADAAEQEFVN 181

Query: 326 CFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIIS 385
            F  +     MP       +   G  +  L+ +AG   ST+EA R +K  A KI    ++
Sbjct: 182 RFAKNQIPDEMPEF-----DFEAGTPVANLLKEAGLCASTSEAMRMVKQGAAKIEGEKVA 236

Query: 386 NEKL 389
           + K 
Sbjct: 237 DAKF 240


>gi|70953026|ref|XP_745641.1| hypothetical protein [Plasmodium chabaudi chabaudi]
 gi|56526028|emb|CAH76862.1| hypothetical protein PC000802.01.0 [Plasmodium chabaudi chabaudi]
          Length = 294

 Score = 73.2 bits (178), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 63/237 (26%), Positives = 101/237 (42%), Gaps = 52/237 (21%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILC------SQGVVTAYIGYDLTASSLHAGHLTQLM 58
           KS+ L  L ER  I+  S+ + +D +       ++   + Y+G DL    LH G L  L 
Sbjct: 56  KSNALKKLYERKLINYTSDIKGIDKILYENEQENENKKSVYVGIDLNCKYLHIGSLIPLT 115

Query: 59  LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT 118
           +L  L+      I L+G  T+ IGDPSF+   R+   ++EI +N + IK     +I    
Sbjct: 116 VLEILRNYKTDVIILLGNSTTKIGDPSFQTNERKQTLNEEIYQNEKSIKETIIDYILNND 175

Query: 119 G----------------------------KTDAL----------------MLNNETWLCS 134
                                        KTD L                +L N  W   
Sbjct: 176 NSNFNATDFPMRQLCGMNLNQMSFQDICKKTDLLSKDEIIYECNGKGSLRILKNNGWYDK 235

Query: 135 IKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +  ID L+  G  F ++++L  +SV  +  + ++L+  + NY+ LQ+YDF+ L K Y
Sbjct: 236 MSVIDFLK-YGEHFGIHKLLRKDSVIKKY-QNKNLTLKDLNYISLQSYDFLYLYKKY 290


>gi|76664689|emb|CAJ17785.1| tyrosyl-tRNA synthetase [Candidatus Phytoplasma solani]
          Length = 116

 Score = 73.2 bits (178), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 38/107 (35%), Positives = 58/107 (54%), Gaps = 1/107 (0%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           F   L  R  I   +N  EL  L   G +  Y G+D TA SL  GHL Q+ ++  LQ+ G
Sbjct: 3   FYEELKWRNLIKDCNNEEELKQLLGHGKIKFYCGFDPTADSLTVGHLVQITMISLLQQQG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFI 114
           H P++L+GG T +IGDP    E R++   ++  +N + I+  F + +
Sbjct: 63  HLPVTLVGGATGLIGDPK-ETEERKLSSLEKSLKNAQSIEKQFKALL 108


>gi|237756624|ref|ZP_04585139.1| tyrosyl-tRNA synthetase [Sulfurihydrogenibium yellowstonense SS-5]
 gi|237691222|gb|EEP60315.1| tyrosyl-tRNA synthetase [Sulfurihydrogenibium yellowstonense SS-5]
          Length = 251

 Score = 70.1 bits (170), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 63/242 (26%), Positives = 106/242 (43%), Gaps = 34/242 (14%)

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER--LK 217
           + R K    +S  EF Y +LQAYD V +  +    +++GGSDQ  N++ G D+ +   ++
Sbjct: 3   KKRFKENIPISIHEFIYPLLQAYDSVAIKAD----VELGGSDQRFNLLIGRDIQKEYGIE 58

Query: 218 TPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYN---------FWQYWRNIDDA 267
           +P++ A+  PLL    G  KM K+    I + +     +           WQYW      
Sbjct: 59  SPQV-AILLPLLVGTDGVKKMSKSYGNYIGITQPPEEMFGKIMSISDELMWQYW------ 111

Query: 268 DVVSFAKRLTTLPMSEIDRMAKLQGKEI---NEAKKIIATEITTMVHGREEAEKAATAAM 324
                 + LT L + EI+++ +   K I    E KK +   I    H +E+A KA     
Sbjct: 112 ------ELLTDLTLDEINKLKEDVQKGILHPMEVKKQLGMYIVERFHSKEDAIKAREHFE 165

Query: 325 ECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSII 384
           +        + +P    S  E+     L  +I     A +  EA+R +K   +K+N   I
Sbjct: 166 KVHSKKEIPEEIPVFKAS--EIGTETELFEIIFNLKLAETKAEAKRLIKQGGVKVNGEKI 223

Query: 385 SN 386
           ++
Sbjct: 224 TD 225


>gi|99035959|ref|ZP_01315004.1| hypothetical protein Wendoof_01000165 [Wolbachia endosymbiont of
           Drosophila willistoni TSC#14030-0811.24]
          Length = 111

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 39/107 (36%), Positives = 60/107 (56%), Gaps = 1/107 (0%)

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           +T + HG +EAE A  AA+  F+    S  +P   I K++V+ G+ L+ L+   GF  S 
Sbjct: 1   MTKICHGDKEAELAQFAAISAFENE-DSSLLPDYIIKKEQVASGISLVDLLHDTGFEPSK 59

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
             A+R ++ N  KIN+++++N    I  + F     IKLS GKK HI
Sbjct: 60  GAAKRLIQGNGCKINDNVVNNIDHVINFESFKDQPFIKLSAGKKRHI 106


>gi|255024986|ref|ZP_05296972.1| tyrosyl-tRNA synthetase [Listeria monocytogenes FSL J1-208]
          Length = 161

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 45/144 (31%), Positives = 67/144 (46%), Gaps = 22/144 (15%)

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE--INEAKKIIATEITTM 309
           T+PY F+Q+W N DD DVV + K  T L  +EID +AK    E  +  A K +A E+T  
Sbjct: 2   TTPYEFYQFWINTDDRDVVKYLKYFTFLTEAEIDELAKQVETEPHLRAAXKTLAAEMTKF 61

Query: 310 VHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGM-------------GLLTLI 356
           VH  E  E+A   +   F   +        +++ DE+ +G               L+  +
Sbjct: 62  VHSEEALEQALKISKALFSGDVK-------ALTADEIEQGFKDVPTFVAEDSEANLVDWL 114

Query: 357 VKAGFATSTNEARRHLKSNAIKIN 380
           V  G   S  +AR  + + AI IN
Sbjct: 115 VTLGIEPSKRQAREDVGNGAIYIN 138


>gi|295091149|emb|CBK77256.1| Tyrosyl-tRNA synthetase [Clostridium cf. saccharolyticum K10]
          Length = 130

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 39/125 (31%), Positives = 74/125 (59%), Gaps = 3/125 (2%)

Query: 287 MAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV 346
           M + +G ++N+AK+I+A E+T +VHG EEA KA  A+   F  S ++ +MPT  + +++ 
Sbjct: 1   MDQWEGSQLNKAKEILAYELTALVHGEEEAVKAQEASRALF-TSGNAANMPTAKLKEEDF 59

Query: 347 SRG-MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLS 405
           + G + +L+++ K+G A S +EARR+++   + ++   + + K           G + + 
Sbjct: 60  ADGSIDILSILQKSGLAPSRSEARRNVEQGGVSVDGVQVKDIKAAFTKDQLSGEG-VVVK 118

Query: 406 FGKKN 410
            GKKN
Sbjct: 119 RGKKN 123


>gi|53729288|ref|ZP_00348367.1| COG0162: Tyrosyl-tRNA synthetase [Pasteuria nishizawae str. North
           American]
          Length = 238

 Score = 66.6 bits (161), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 56/214 (26%), Positives = 99/214 (46%), Gaps = 16/214 (7%)

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  +   D+L ++ S  +V RML  E    R + ++ +   EF Y +LQ YD V L
Sbjct: 10  NSRWLEKLNLEDIL-QLMSQMTVARMLEREDFSQRYREKRPIGMHEFLYPLLQGYDSVVL 68

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIW 246
             +    +++GG+DQ  N++ G  L +     K   +T PLL    G  KM K++   + 
Sbjct: 69  ESD----VELGGTDQTFNLLMGRQLQKFYGKGKQVVMTLPLLVGLDGQKKMSKSMGNQVG 124

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG---KEINEAKKIIA 303
           + ++   P N +     + D  ++ + + +T     E++ + +  G   +   EAK  +A
Sbjct: 125 ITED---PVNMYGKIMALSDESMLDYYQLITDYTSQEVEELRRELGEGSQHPMEAKHRLA 181

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMP 337
                 V GR  +  AA  A E F  ++  + +P
Sbjct: 182 ----HFVIGRYHSGLAAQMAGEHFRKTVQQKQLP 211


>gi|33322971|gb|AAQ07222.1|AF496530_1 tyrosyl-tRNA synthetase 1 [Lactobacillus delbrueckii subsp.
          lactis]
          Length = 90

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 37/86 (43%), Positives = 46/86 (53%), Gaps = 1/86 (1%)

Query: 7  DFLSILSERGFIHQISNPREL-DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
          D L  L  RG I+Q ++   L D L     +  Y G D T  SLH GHL   M+L   Q 
Sbjct: 5  DILEDLKWRGAINQETDEEGLRDYLAKHDDLALYCGTDPTGDSLHIGHLIPFMILKRFQL 64

Query: 66 TGHKPISLMGGGTSIIGDPSFRDESR 91
           G+KP+ ++GGGT  IGDPS R   R
Sbjct: 65 AGYKPVIVIGGGTGSIGDPSGRSTER 90


>gi|169841662|ref|ZP_02874775.1| tyrosyl-tRNA synthetase [candidate division TM7 single-cell isolate
           TM7a]
          Length = 62

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 25/57 (43%), Positives = 43/57 (75%)

Query: 253 SPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTM 309
           +P+ F+QYWRN+ DADV++  + LT LP+ +I+ M+  +G ++NEAK+I+A  +T +
Sbjct: 6   TPFEFYQYWRNLPDADVLTCLRMLTFLPLEQIEEMSLWEGAKLNEAKEILAMHLTEL 62


>gi|291458843|ref|ZP_06598233.1| tyrosine--tRNA ligase [Oribacterium sp. oral taxon 078 str.
          F0262]
 gi|291418097|gb|EFE91816.1| tyrosine--tRNA ligase [Oribacterium sp. oral taxon 078 str.
          F0262]
          Length = 88

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 30/68 (44%), Positives = 44/68 (64%)

Query: 12 LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
          L ERG I Q+++  ++  L + G    YIG+D TA SLH GH   L L+  LQ+ G++PI
Sbjct: 21 LRERGLIAQLTDEEKIRELINAGKAVFYIGFDPTADSLHVGHFMALCLMKRLQEAGNRPI 80

Query: 72 SLMGGGTS 79
          +L+GGG +
Sbjct: 81 ALVGGGPA 88


>gi|94502284|ref|ZP_01308765.1| tyrosyl-tRNA synthetase [Candidatus Sulcia muelleri str. Hc
          (Homalodisca coagulata)]
 gi|94451163|gb|EAT14107.1| tyrosyl-tRNA synthetase [Candidatus Sulcia muelleri str. Hc
          (Homalodisca coagulata)]
          Length = 90

 Score = 63.9 bits (154), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 33/91 (36%), Positives = 52/91 (57%), Gaps = 4/91 (4%)

Query: 1  MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
          M  F  + +  L  RG IH  +   ++       ++T Y G+D T  SLH G+L  +++L
Sbjct: 1  MNNFNLNLIQELLWRGLIHDTTYSEQI----KNEIITLYTGFDPTYKSLHIGNLVAIIML 56

Query: 61 FWLQKTGHKPISLMGGGTSIIGDPSFRDESR 91
             QK+G+  IS++GGGT +IGDPS ++  R
Sbjct: 57 IHFQKSGNNIISVIGGGTGMIGDPSGKNCER 87


>gi|169840905|ref|ZP_02874018.1| tyrosyl-tRNA synthetase [candidate division TM7 single-cell isolate
           TM7a]
          Length = 58

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 29/56 (51%), Positives = 35/56 (62%), Gaps = 2/56 (3%)

Query: 148 FSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQW 203
           F  N ML  +   +R+     LSFLEFNYMILQ+YDF  L  +Y C +Q GG DQW
Sbjct: 3   FPYNNMLRAKCYENRMA--NGLSFLEFNYMILQSYDFYRLFLDYGCNMQFGGDDQW 56


>gi|82540397|ref|XP_724520.1| hypothetical protein [Plasmodium yoelii yoelii str. 17XNL]
 gi|23479187|gb|EAA16085.1| tyrosyl-tRNA synthetase 1-related [Plasmodium yoelii yoelii]
          Length = 173

 Score = 63.2 bits (152), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 41/117 (35%), Positives = 58/117 (49%), Gaps = 6/117 (5%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILC------SQGVVTAYIGYDLTASSLHAGHLTQL 57
            KS+ L  L ER  I+ IS+ + +D +       ++   + Y+G DL    LH G L QL
Sbjct: 55  IKSNALKKLYERKLINYISDLKNVDQILYDNENENENKKSVYLGIDLNCKYLHIGSLVQL 114

Query: 58  MLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFI 114
             L  L+      I L+G  T+ IGDPSF+   R+   + EI EN + IK     FI
Sbjct: 115 KTLEILRNYKTDVIILLGNSTTKIGDPSFQLNERKETLNDEICENEKNIKKSLIDFI 171


>gi|14589325|emb|CAC43232.1| tyrosyl-tRNA synthetase [Mycobacterium smegmatis]
          Length = 354

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 34/87 (39%), Positives = 53/87 (60%), Gaps = 3/87 (3%)

Query: 229 LTTASGTKMGKTLSGA-IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM 287
           + T S  K GK+  G  +WL++EMTSPY ++QY+ N  DADV+ + +  T L   E+  +
Sbjct: 144 VGTDSRQKFGKSTGGGNLWLDREMTSPYAWYQYFVNSPDADVLGYLRWFTFLTPDELAEL 203

Query: 288 AKLQGKEINE--AKKIIATEITTMVHG 312
           A       +E  A++ +A E+TT+VHG
Sbjct: 204 ADATENRPHERAAQRRLARELTTLVHG 230


>gi|205374490|ref|ZP_03227286.1| tyrosyl-tRNA synthetase [Bacillus coahuilensis m4-4]
          Length = 104

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 31/79 (39%), Positives = 41/79 (51%)

Query: 7  DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
          D L  L  RG ++Q ++   L  +     +  Y G D T  S+H GHL   + L   Q  
Sbjct: 2  DILKELEWRGILYQQTDEEGLSNVLHTEKIALYCGVDPTGDSMHIGHLLPFLTLRRFQNA 61

Query: 67 GHKPISLMGGGTSIIGDPS 85
          GH PI L+GG T +IGDPS
Sbjct: 62 GHTPIVLVGGATGLIGDPS 80


>gi|213021807|ref|ZP_03336254.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. 404ty]
          Length = 68

 Score = 60.5 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 24/68 (35%), Positives = 43/68 (63%)

Query: 57  LMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY 116
           ++ L   Q+ GHKP++L+GG T +IGDPSF+   R++   + +QE + KI+   + F+ +
Sbjct: 1   MLCLKRFQQAGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVAKIRKQVAPFLDF 60

Query: 117 GTGKTDAL 124
             G+  A+
Sbjct: 61  DCGENSAI 68


>gi|330861037|emb|CBX71308.1| hypothetical protein YEW_BZ08530 [Yersinia enterocolitica W22703]
          Length = 80

 Score = 60.1 bits (144), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 29/72 (40%), Positives = 41/72 (56%)

Query: 6  SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
          S+ +  L ERG + Q+++   L    +QG ++ Y G+D TA SLH GHL  L+ L   Q 
Sbjct: 4  SNLIKQLQERGLVAQVTDEDALAERLAQGPISLYCGFDPTADSLHLGHLVPLLCLKRFQL 63

Query: 66 TGHKPISLMGGG 77
           GH+P   M GG
Sbjct: 64 AGHRPGCFMWGG 75


>gi|169838726|ref|ZP_02871914.1| tyrosyl-tRNA synthetase [candidate division TM7 single-cell isolate
           TM7a]
          Length = 65

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/67 (43%), Positives = 42/67 (62%), Gaps = 2/67 (2%)

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           I+L+GGGT +IGDPS R + R+++  ++I  N E  K   S FI++G  K  A M+NN  
Sbjct: 1   IALVGGGTGMIGDPSGRSDLRKVLTIEDIDHNCECFKKQMSCFIEFGENK--ARMVNNAD 58

Query: 131 WLCSIKY 137
           WL  + Y
Sbjct: 59  WLRDLNY 65


>gi|307069546|ref|YP_003878023.1| tyrosyl-tRNA synthetase [Candidatus Zinderia insecticola CARI]
 gi|306482806|gb|ADM89677.1| tyrosyl-tRNA synthetase [Candidatus Zinderia insecticola CARI]
          Length = 324

 Score = 56.6 bits (135), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 52/171 (30%), Positives = 88/171 (51%), Gaps = 16/171 (9%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLM-GGGTSIIGDPSFRDESRRMMRSQE 98
           +G+D T   +H GH   L  +  ++K     I+++ G  TSIIGDP+ + ++R  ++ + 
Sbjct: 36  LGFDPTNFKIHLGHYFLLKKIKNIKKIKLFNINIIIGNFTSIIGDPTGKKKTRYFLKYKN 95

Query: 99  IQENIEKIKGIFSSFIKYGTGKTDALMLNNETW--LCSIKY-IDLLREIGSFFSVNRMLS 155
           I  N +     F  F+     K +     N  W  L  IKY I+LL +    F++N+++ 
Sbjct: 96  IINNSKIYLLQFGIFL--NISKINIYY--NSKWNILFKIKYFINLLSK----FTLNKIIE 147

Query: 156 FESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNI 206
            ++   R+K ++ +   E  Y I+QAYD V L    D  L++GG DQ  N+
Sbjct: 148 RKNFMKRIKNKKPIYLHEIIYSIIQAYDSVIL----DSDLEIGGIDQKFNL 194


>gi|323695191|ref|ZP_08109315.1| tyrosine-tRNA ligase [Clostridium symbiosum WAL-14673]
 gi|323500753|gb|EGB16691.1| tyrosine-tRNA ligase [Clostridium symbiosum WAL-14673]
          Length = 131

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 39/122 (31%), Positives = 71/122 (58%), Gaps = 3/122 (2%)

Query: 290 LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG 349
           ++G ++N AK+I+A E+T +VHG  EAEKA  A+   F  S ++  MPT  +++++ +  
Sbjct: 1   MEGSQLNTAKEILAFELTNLVHGEAEAEKAKEASRALF-TSGNAADMPTAELTEEDFNGD 59

Query: 350 -MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGK 408
            + +LT++ K+G A S +EARR+++   + ++   + + K           G I +  GK
Sbjct: 60  EIDILTILQKSGLAPSRSEARRNVEQGGVAVDGEAVKDSKAVFTKAQLSGDG-IVVKRGK 118

Query: 409 KN 410
           KN
Sbjct: 119 KN 120


>gi|289811391|ref|ZP_06542020.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. AG3]
          Length = 46

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/46 (56%), Positives = 30/46 (65%)

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPL 228
           DF  L K +   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL
Sbjct: 1   DFACLNKLHGVALQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPL 46


>gi|7437494|pir||S77855 probable tyrosine-tRNA ligase (EC 6.1.1.1) - Mycoplasma capricolum
           (fragment)
          Length = 78

 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 39/77 (50%), Gaps = 6/77 (7%)

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
           +GG T +IGDPSF+   R +   Q++  NI KI       I   +       +NN  WL 
Sbjct: 8   IGGATGMIGDPSFKASERVLQTKQQVDHNINKISTQLKEIIPTVS------FVNNRDWLE 61

Query: 134 SIKYIDLLREIGSFFSV 150
            I  ID LR+IG  F++
Sbjct: 62  DISLIDFLRDIGKHFNL 78


>gi|207109787|ref|ZP_03243949.1| tyrosyl-tRNA synthetase [Helicobacter pylori HPKX_438_CA4C1]
          Length = 155

 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 71/148 (47%), Gaps = 16/148 (10%)

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M  N TWL ++    ++ E+ + FSV RML  +    R K  + +S +EF Y +LQ YD 
Sbjct: 1   MCFNSTWLDALGAKGMI-ELCAKFSVARMLERDDFTKRYKENRPISIVEFLYPLLQGYDS 59

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK-LFALTSPLLTTASGT-KMGKTLS 242
           V +    D  +++GG+DQ  N++ G  L       K    +T PLL    G  KM K+L 
Sbjct: 60  VAI----DADIELGGNDQKFNLLVGRFLQRAYGLNKEQSVITMPLLEGLDGVQKMSKSLG 115

Query: 243 GAIWLNKEMTSPYN---------FWQYW 261
             + + +E  + +           W+Y+
Sbjct: 116 NYVGITEEPNAMFGKIMSVSDDLMWRYY 143


>gi|109099438|ref|XP_001107606.1| PREDICTED: tyrosyl-tRNA synthetase, mitochondrial, partial [Macaca
           mulatta]
          Length = 169

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 36/97 (37%), Positives = 54/97 (55%), Gaps = 4/97 (4%)

Query: 15  RGFIHQISNPRELDILCSQGVV----TAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           + F  +     EL  L  +G      T Y G+D TA SLH GHL  L+ LF LQ+ GH  
Sbjct: 49  KNFFPETGTKIELPELFDRGTASFPQTIYCGFDPTADSLHVGHLLALLGLFHLQRAGHNV 108

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIK 107
           I+L+GG T+ +GDPS R + R  + ++ ++ N   ++
Sbjct: 109 IALVGGATARLGDPSGRTKEREALETERVRANARALR 145


>gi|163784933|ref|ZP_02179691.1| tyrosyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
 gi|159879801|gb|EDP73547.1| tyrosyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
          Length = 128

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/67 (38%), Positives = 39/67 (58%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   L  L   Q+ GH    ++G  T++IGDPS RD++R  +  +++ 
Sbjct: 44  GFDPTAPDLHLGHTVLLQKLRTFQQLGHTVYFIIGDFTAMIGDPSGRDKTRPPLTKEQVF 103

Query: 101 ENIEKIK 107
           EN +  K
Sbjct: 104 ENAKTYK 110


>gi|270011291|gb|EFA07739.1| hypothetical protein TcasGA2_TC002219 [Tribolium castaneum]
          Length = 148

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 50/100 (50%), Gaps = 2/100 (2%)

Query: 234 GTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQ 291
           G K GK+   A+WL+ E TSP+  +Q++    D +V    K  T  P+  I  + +   +
Sbjct: 2   GDKFGKSAGNAMWLSAEKTSPFTLYQFFVRQVDTEVEKMLKFFTFEPVGSIKDLMRRHTE 61

Query: 292 GKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSI 331
             E+   +K +A ++  +VHG +  E A  A    ++ SI
Sbjct: 62  KPELRLPQKYLAEQVVLLVHGEKGLEAAHKATKVLYERSI 101


>gi|207110502|ref|ZP_03244664.1| tyrosyl-tRNA synthetase [Helicobacter pylori HPKX_438_CA4C1]
          Length = 99

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 33/109 (30%), Positives = 55/109 (50%), Gaps = 11/109 (10%)

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGF 361
           +A EI    +  E+A KA     E F     +  +P I +S+ +   G+G+L ++ + GF
Sbjct: 2   LAGEIVARYYDNEQAIKAK----EQFSKVFSANLLPEI-LSESDFDEGVGILDVLKQIGF 56

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
             ST++ARR ++   +KIN  +I NE  +         GN  +  GKK+
Sbjct: 57  CPSTSQARRDIQGGGVKINQEVIKNESYRF------VKGNYVIQLGKKS 99


>gi|207108556|ref|ZP_03242718.1| tyrosyl-tRNA synthetase [Helicobacter pylori HPKX_438_CA4C1]
          Length = 107

 Score = 49.7 bits (117), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 23/62 (37%), Positives = 39/62 (62%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+D TA  LH GH   +  L  LQ+ G +   L+G  T++IGDP+ ++E+R+ +  +++ 
Sbjct: 44  GFDPTAPDLHLGHTVLIQKLALLQQYGARVKFLIGDFTAMIGDPTGKNETRKPLNREQVL 103

Query: 101 EN 102
           EN
Sbjct: 104 EN 105


>gi|56808834|ref|ZP_00366547.1| COG0162: Tyrosyl-tRNA synthetase [Streptococcus pyogenes M49 591]
          Length = 64

 Score = 49.3 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/58 (41%), Positives = 34/58 (58%)

Query: 12 LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
          L  RG + Q ++ + L    ++G V+ Y GYD TA SLH GHL  ++    LQ+ GHK
Sbjct: 7  LKTRGLVFQTTDEQALVKALTEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQRAGHK 64


>gi|169836597|ref|ZP_02869785.1| tyrosyl-tRNA synthetase [candidate division TM7 single-cell isolate
           TM7a]
          Length = 42

 Score = 47.8 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 19/38 (50%), Positives = 27/38 (71%)

Query: 223 ALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQY 260
           A+T  LL  + G KMGKT+ GA+WL+   T+P+ F+QY
Sbjct: 5   AMTITLLLNSEGKKMGKTVGGAVWLDPNKTTPFEFYQY 42


>gi|121730108|ref|ZP_01682509.1| DnaK suppressor protein [Vibrio cholerae V52]
 gi|121628143|gb|EAX60675.1| DnaK suppressor protein [Vibrio cholerae V52]
          Length = 216

 Score = 47.4 bits (111), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 46/198 (23%), Positives = 90/198 (45%), Gaps = 11/198 (5%)

Query: 195 LQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTS 253
           +++GG+DQ  N++ G +L +         L  PLL    G  KM K+    I +++   +
Sbjct: 5   VELGGTDQKFNLLMGRELQKANGQKPQVVLMMPLLVGLDGEKKMSKSAHNYIGVSE---A 61

Query: 254 PYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATEITTMVH 311
           P   +    +I D  + S+ + L+  P+ E+ +       G    + K ++A EI    H
Sbjct: 62  PSEMFGKIMSISDDLMWSYYELLSFRPLEEVAQFKAEVANGANPRDIKILLAKEIIARFH 121

Query: 312 GREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRH 371
            + +A+ A    +  F      +      + + E   G+ +  L+ +AG   ST++A R 
Sbjct: 122 SQADADAAEQEFINRF-----QKGAMPEEMPEFEFESGIAISNLLKEAGLVASTSDALRM 176

Query: 372 LKSNAIKINNSIISNEKL 389
           +K  A+K++   + + KL
Sbjct: 177 IKQGAVKLDGEKLEDAKL 194


>gi|325528769|gb|EGD05830.1| tyrosyl-tRNA synthetase [Burkholderia sp. TJI49]
          Length = 113

 Score = 47.4 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 24/52 (46%), Positives = 31/52 (59%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESR 91
           +G D TA  +H GH   L  +  LQ  GH  I L+G  TS+IGDPS R+ +R
Sbjct: 55  LGLDPTAPDIHIGHTVVLNKMRQLQDLGHTVIFLIGDFTSLIGDPSGRNATR 106


>gi|171185257|ref|YP_001794176.1| tyrosyl-tRNA synthetase [Thermoproteus neutrophilus V24Sta]
 gi|170934469|gb|ACB39730.1| tyrosyl-tRNA synthetase [Thermoproteus neutrophilus V24Sta]
          Length = 319

 Score = 47.0 bits (110), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 47/199 (23%), Positives = 82/199 (41%), Gaps = 21/199 (10%)

Query: 37  TAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRS 96
            AY+G++     +H G L     L  L++ G   + L+    + I D             
Sbjct: 24  VAYLGFE-PLWPIHVGWLVWAHKLAELREAGFDVVVLVATWHAWINDKG---------SL 73

Query: 97  QEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSF 156
           +E++ + EK+K +     K+     D +  +   W       +L+ +     S+ R+   
Sbjct: 74  EELRSHGEKVKAVLDKIGKFKYVYGDEIAKDPRYW-------ELVVKTAKETSLARVRRA 126

Query: 157 ESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL 216
             V  R   E  L F +  Y I+Q  D   L  +    + +GG DQ    +   D+ ERL
Sbjct: 127 TPVMGRRTEEVELDFSKLLYPIMQVADIFYLGVD----VAVGGMDQRRAHMLARDVAERL 182

Query: 217 KTPKLFALTSPLLTTASGT 235
              K  A+ +P++T+ SGT
Sbjct: 183 GFKKPVAIHTPIITSLSGT 201


>gi|213422061|ref|ZP_03355127.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
          serovar Typhi str. E01-6750]
          Length = 62

 Score = 47.0 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 22/55 (40%), Positives = 32/55 (58%)

Query: 6  SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
          S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L
Sbjct: 4  SNLIKQLQERGLVAQVTDEDALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCL 58


>gi|126459506|ref|YP_001055784.1| tyrosyl-tRNA synthetase [Pyrobaculum calidifontis JCM 11548]
 gi|126249227|gb|ABO08318.1| tyrosyl-tRNA synthetase [Pyrobaculum calidifontis JCM 11548]
          Length = 336

 Score = 47.0 bits (110), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 49/198 (24%), Positives = 84/198 (42%), Gaps = 21/198 (10%)

Query: 38  AYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQ 97
           AY+G++     +H G L     L  LQ+ G   + L+    + I D    +E RR     
Sbjct: 46  AYLGFE-PLWPIHVGWLVWAYKLRELQEAGFDVVVLVATWHAWINDKGSLEELRR--HGD 102

Query: 98  EIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFE 157
           E+++ + K+     +  KY  G  + L  +   W  +++       +    S+ R+    
Sbjct: 103 EVRQFLGKV-----AQFKYVYG--EELAKDPAYWELAVR-------VAKGASLARVRRAT 148

Query: 158 SVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK 217
            V  R   E  L F +  Y +LQ  D   L  +    + +GG DQ    +   D+ E+L 
Sbjct: 149 PVMGRRAEEVELDFAKLLYPVLQVADIFYLGVD----VAVGGVDQRRAHMLARDVAEKLG 204

Query: 218 TPKLFALTSPLLTTASGT 235
             K  AL +P++T+ SG 
Sbjct: 205 FKKPVALHTPIITSLSGV 222


>gi|18312976|ref|NP_559643.1| tyrosyl-tRNA synthetase [Pyrobaculum aerophilum str. IM2]
 gi|74563801|sp|Q8ZW77|SYY2_PYRAE RecName: Full=Tyrosyl-tRNA synthetase 2; AltName:
           Full=Tyrosine--tRNA ligase 2; Short=TyrRS 2
 gi|18160474|gb|AAL63825.1| tyrosyl-tRNA synthetase [Pyrobaculum aerophilum str. IM2]
          Length = 316

 Score = 47.0 bits (110), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 46/199 (23%), Positives = 85/199 (42%), Gaps = 21/199 (10%)

Query: 37  TAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRS 96
           +AY+G++     +H G L     L  L++ G   I L+    + I D             
Sbjct: 24  SAYLGFE-PLWPIHIGWLIWAYKLAELKEAGFDVIVLVATWHAWINDKG---------SI 73

Query: 97  QEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSF 156
           +E++ + E+++ +     K+     D +  + + W       +L+ +I    S+ R+   
Sbjct: 74  EELRAHGERVRAVLDRIGKFKYVYGDDVAKDPKYW-------ELVVKIAKETSLARVKRA 126

Query: 157 ESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL 216
             V  R   E  L F +  Y ++Q  D   L  +    + +GG DQ    +   D+ E+L
Sbjct: 127 TPVMGRRAEEVELDFSKLMYPLMQVADIFYLGVD----VAVGGMDQRRAHMLARDVAEKL 182

Query: 217 KTPKLFALTSPLLTTASGT 235
              K  AL +P++T+ SGT
Sbjct: 183 GLKKPIALHTPIITSLSGT 201


>gi|119873262|ref|YP_931269.1| tyrosyl-tRNA synthetase [Pyrobaculum islandicum DSM 4184]
 gi|119674670|gb|ABL88926.1| tyrosyl-tRNA synthetase [Pyrobaculum islandicum DSM 4184]
          Length = 315

 Score = 45.8 bits (107), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 46/198 (23%), Positives = 82/198 (41%), Gaps = 21/198 (10%)

Query: 38  AYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQ 97
           AY+G++     +H G L     L  L++ G   + L+    + I D             +
Sbjct: 25  AYLGFE-PLWPIHVGWLVWAYKLAELREAGFDVVVLVATWHAWINDKG---------ALE 74

Query: 98  EIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFE 157
           E++ + EK+K +     K+     D +  +   W       +L+ +     S+ R+    
Sbjct: 75  ELRSHGEKVKAVLDKIGKFKYVYGDEIARDPRYW-------ELVVKTAKETSLARVRRAT 127

Query: 158 SVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK 217
            V  R   E  L F +  Y I+Q  D   L  +    + +GG DQ    +   D+ E+L 
Sbjct: 128 PVMGRRMEEVELDFSKLLYPIMQVADIFYLGVD----VAVGGMDQRRAHMLARDVAEKLG 183

Query: 218 TPKLFALTSPLLTTASGT 235
             K  A+ +P++T+ SGT
Sbjct: 184 FKKPVAIHTPIITSLSGT 201


>gi|291333575|gb|ADD93269.1| tyrosyl tRNA synthetase [uncultured archaeon MedDCM-OCT-S08-C92]
          Length = 347

 Score = 44.3 bits (103), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 53/215 (24%), Positives = 93/215 (43%), Gaps = 27/215 (12%)

Query: 26  ELD-ILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDP 84
           ELD +L ++    AY+G++  +  LHAG L  ++    L   G +   L+      I D 
Sbjct: 27  ELDNLLTNKETPRAYVGFE-PSGLLHAGSLVPMLKCKELVDAGFEVTILLADWHGYIND- 84

Query: 85  SFRDESRRMMRS-QEIQENIEKIKGIFSSF---IKYGTGKTDALMLNNETWLCSIKYIDL 140
                  ++  S   +   +E  + +FS F   +K+ T     +++ +  W       ++
Sbjct: 85  -------KLGGSWDNLNAGVEYQRQMFSVFCPGVKFKTASE--IVIEDGYW-------EM 128

Query: 141 LREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGS 200
           +  I    S+ RM    S+  R +++      +F Y  +QA D   L  +    L +GG 
Sbjct: 129 VLRISKASSLKRMRRALSIMGRDEKDGDKDMSKFFYPAMQAADIYALEAD----LALGGM 184

Query: 201 DQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT 235
           DQ    +   D  ++LK  K  AL +PLL + SG 
Sbjct: 185 DQRHAHMLARDAADKLKLRKPVALHTPLLGSLSGP 219


>gi|163802289|ref|ZP_02196183.1| tyrosyl-tRNA synthetase [Vibrio sp. AND4]
 gi|159173818|gb|EDP58632.1| tyrosyl-tRNA synthetase [Vibrio sp. AND4]
          Length = 133

 Score = 43.9 bits (102), Expect = 0.048,   Method: Composition-based stats.
 Identities = 21/68 (30%), Positives = 37/68 (54%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           +G D TA  +H GH      L   Q+ GH+   L+G  T+++GDP+ ++ +R  +  +++
Sbjct: 38  LGADPTAPDIHLGHTVIFNKLRLFQELGHEVTFLIGDFTAMVGDPTGKNTTRPPLSREDV 97

Query: 100 QENIEKIK 107
             N E  K
Sbjct: 98  LRNAETYK 105


>gi|145635108|ref|ZP_01790814.1| tyrosyl-tRNA synthetase [Haemophilus influenzae PittAA]
 gi|145267716|gb|EDK07714.1| tyrosyl-tRNA synthetase [Haemophilus influenzae PittAA]
          Length = 169

 Score = 43.9 bits (102), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 41/154 (26%), Positives = 69/154 (44%), Gaps = 10/154 (6%)

Query: 237 MGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKE 294
           M K+L   I + +   +P + +    +I D  +  +   L+  P+SEI ++     +GK 
Sbjct: 1   MSKSLGNYIGVTE---APSDMFGKVMSISDELMWDWYNLLSFRPLSEIAQLKSEVEKGKN 57

Query: 295 INEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLT 354
             + K ++A E+    H  E A  A    +  F        MP  + S +     +GL T
Sbjct: 58  PRDVKILLAKELIARFHNEEAANAAEQEFINRFQKGAMPDEMPEFTFSGE-----IGLAT 112

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEK 388
           L+ +AG   ST+EA R  +   +KIN   + N K
Sbjct: 113 LLKEAGLVPSTSEAIRSAQQGGVKINGEKVDNVK 146


>gi|169838964|ref|ZP_02872152.1| putative tyrosyl-tRNA synthetase 1 [candidate division TM7
           single-cell isolate TM7a]
          Length = 79

 Score = 43.1 bits (100), Expect = 0.079,   Method: Composition-based stats.
 Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 5/77 (6%)

Query: 87  RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGS 146
           R + R +  S+ +  N+E +K  + +F     GK   L +NN  W   I YID L  IG 
Sbjct: 2   RKQERDLRNSETVNNNVESLKSNYQNF----QGKNFEL-VNNYDWFKDINYIDFLYRIGK 56

Query: 147 FFSVNRMLSFESVRSRL 163
             S+ +ML  + V+ R+
Sbjct: 57  HVSMTQMLDRDFVQQRI 73


>gi|297170505|gb|ADI21534.1| tyrosyl-tRNA synthetase [uncultured gamma proteobacterium
           HF0070_25G02]
          Length = 200

 Score = 43.1 bits (100), Expect = 0.084,   Method: Compositional matrix adjust.
 Identities = 47/184 (25%), Positives = 82/184 (44%), Gaps = 27/184 (14%)

Query: 224 LTSPLLTTASGTK-MGKTLSGAIWLNKEMTSPYN---------FWQYWRNIDDADVVSFA 273
           +T P+L    G K M K+L+  I L +     +           W+Y+      D++SF 
Sbjct: 7   MTLPILEGTDGVKKMSKSLNNYIGLKESSNDMFGKIMSISDDLMWRYF------DLLSFK 60

Query: 274 KRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS 333
              +++ + E+ +  + QG    EAKK+++ EI T  HG E+A  A       F      
Sbjct: 61  ---SSVEIKELKKKTE-QGLNPMEAKKMLSAEIVTRFHGEEKALLAEKEFTNRFSKGHDP 116

Query: 334 QHMPTISISKDEVSRGMGLLTLIV-----KAGFATSTNEARRHLKSNAIKINNSIISNEK 388
             +  I +S    S  + +L L+      +     S +EARR +   A+KI+   IS+E 
Sbjct: 117 AEIKLIKLSMKTSS--ISILDLLSSEELGEHKLCKSKSEARRMIAQGAVKIDGKKISDEA 174

Query: 389 LQIK 392
           + ++
Sbjct: 175 ISVQ 178


>gi|297517664|ref|ZP_06936050.1| tyrosyl-tRNA synthetase [Escherichia coli OP50]
          Length = 135

 Score = 43.1 bits (100), Expect = 0.084,   Method: Composition-based stats.
 Identities = 36/127 (28%), Positives = 62/127 (48%), Gaps = 10/127 (7%)

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMEC-FDMSIHS------QHMPTISISKDEVSRGM 350
           A+ ++A ++T +VHG EE  +AA    EC F  S+ +      + +    +   E+ +G 
Sbjct: 10  AQCVLAEQVTRLVHG-EEGLQAAKRITECLFSGSLSALSEADFEQLAQDGVPMVEMEKGA 68

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            L+  +V +    S  +AR+ + SNAI IN    S+ +   K ++        L  GKKN
Sbjct: 69  DLMQALVDSELQPSRGQARKTIASNAITINGEKQSDPEYFFKEEERLFGRFTLLRRGKKN 128

Query: 411 HIICHLC 417
           +  C +C
Sbjct: 129 Y--CLIC 133


>gi|297185015|gb|ADI21124.1| tyrosyl-tRNA synthetase [uncultured gamma proteobacterium
           EB750_07C09]
          Length = 70

 Score = 42.4 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 23/62 (37%), Positives = 31/62 (50%)

Query: 46  ASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEK 105
           A  LH GH   +  +   Q  GH  I L+G  T++IGDPS R+ +R  +   EI  N   
Sbjct: 5   APDLHLGHTVVINKMRQFQNFGHNVIFLIGDFTALIGDPSGRNVTRPPLTRDEIDANANT 64

Query: 106 IK 107
            K
Sbjct: 65  YK 66


>gi|145592304|ref|YP_001154306.1| tyrosyl-tRNA synthetase [Pyrobaculum arsenaticum DSM 13514]
 gi|145284072|gb|ABP51654.1| tyrosyl-tRNA synthetase [Pyrobaculum arsenaticum DSM 13514]
          Length = 314

 Score = 42.4 bits (98), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 44/198 (22%), Positives = 82/198 (41%), Gaps = 21/198 (10%)

Query: 38  AYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQ 97
           AY+G++     +H G L     L  L++ G   + L+    + + D    D S       
Sbjct: 24  AYLGFE-PLWPIHVGWLVWAYKLAELKEAGFDVVILVATWHAWVNDKG--DIS------- 73

Query: 98  EIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFE 157
           +++ + EK+  +     K+     D +  +   W       +L+  I    S+ R+    
Sbjct: 74  QLRAHGEKVIAVLDKIAKFRYVYGDEIAKDPRYW-------ELVMRIAKETSLARIRRAT 126

Query: 158 SVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK 217
            +  R   E  L F +  Y ++Q  D   L  +    + +GG DQ    +   D+ E+L 
Sbjct: 127 PIMGRRAEEVELDFSKLLYPVMQVADIFYLGVD----VAVGGMDQRRAHMLARDVAEKLG 182

Query: 218 TPKLFALTSPLLTTASGT 235
             K  A+ +P++T+ SGT
Sbjct: 183 FKKPVAIHTPIITSLSGT 200


>gi|195062144|ref|XP_001996142.1| GH13981 [Drosophila grimshawi]
 gi|193891934|gb|EDV90800.1| GH13981 [Drosophila grimshawi]
          Length = 431

 Score = 41.6 bits (96), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 31/134 (23%), Positives = 56/134 (41%), Gaps = 21/134 (15%)

Query: 30  LCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRD 88
           LC QG     Y G   ++ SLH GHL   M+  WLQ+T   P+ +              D
Sbjct: 111 LCEQGKPFYLYTGRGPSSESLHIGHLVPFMIAKWLQETFDVPLII-----------QLTD 159

Query: 89  ESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL--CSIKYIDLLREIGS 146
           + + + +  +I+E I+  +      I  G       + NN  ++  C   Y +++R    
Sbjct: 160 DEKSLWKDLKIEEAIKLARENAKDIIAVGFDVDKTFIFNNLEFMGKCPAMYQNIIR---- 215

Query: 147 FFSVNRMLSFESVR 160
              + + ++F  V+
Sbjct: 216 ---IQKCVTFNQVK 226


>gi|156836578|ref|XP_001642344.1| hypothetical protein Kpol_242p9 [Vanderwaltozyma polyspora DSM
          70294]
 gi|156112849|gb|EDO14486.1| hypothetical protein Kpol_242p9 [Vanderwaltozyma polyspora DSM
          70294]
          Length = 73

 Score = 41.2 bits (95), Expect = 0.30,   Method: Composition-based stats.
 Identities = 26/57 (45%), Positives = 29/57 (50%), Gaps = 2/57 (3%)

Query: 5  KSDFLSILSERGFIHQISNPREL--DILCSQGVVTAYIGYDLTASSLHAGHLTQLML 59
          K   L+ L ERG I QIS P  L    L     V  Y G D TA SLH G+L  LM+
Sbjct: 17 KRSLLAELKERGLISQISQPESLLNKALQDGKRVKLYCGADPTARSLHLGNLVPLMI 73


>gi|297170579|gb|ADI21606.1| tyrosyl-tRNA synthetase [uncultured Oceanospirillales bacterium
           HF0130_06B06]
          Length = 160

 Score = 40.8 bits (94), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 38/155 (24%), Positives = 71/155 (45%), Gaps = 17/155 (10%)

Query: 268 DVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKIIATEITTMVHGRE--EAEKAATAA 323
           DV  + +  T L + EI    ++    +   EA+ I+A+E+T ++HG E   A K  + +
Sbjct: 2   DVYKYLRYFTFLSIEEIQEIELSDKSSQSKPEAQSILASEVTKLLHGGEGLAAAKRISDS 61

Query: 324 MECFDMS---------IHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKS 374
           +   D+S         +    +P  S +  +V     ++ ++V+   A S   AR  + +
Sbjct: 62  LFSGDISKLTRDDLKQLDLDGLPKTSFAGGQVD----IIQVLVRTELAKSNKMAREFIGN 117

Query: 375 NAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
           NAI +N S++ +  L +   +    G   L  GKK
Sbjct: 118 NAISVNGSLVHSGDLILDASNALEGGYFVLRRGKK 152


>gi|213419416|ref|ZP_03352482.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E01-6750]
          Length = 125

 Score = 40.8 bits (94), Expect = 0.40,   Method: Composition-based stats.
 Identities = 27/90 (30%), Positives = 46/90 (51%), Gaps = 8/90 (8%)

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMEC-FDMSIHS------QHMPTISISKDEVSRGM 350
           A+ ++A ++T +VHG EE   AA    EC F  S+ +      + +    +   E+ +G 
Sbjct: 5   AQYVLAEQVTRLVHG-EEGLVAAKRITECLFSGSLSALSEADFEQLAQDGVPMVEMEKGA 63

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKIN 380
            L+  +V A    S  +AR+ + SNA+ IN
Sbjct: 64  DLMQALVDAELQPSRGQARKTIASNAVTIN 93


>gi|72001474|ref|NP_507683.2| tryptophanyl (W) tRNA Synthetase family member (wrs-1)
           [Caenorhabditis elegans]
 gi|30962537|dbj|BAC76735.1| tryptophanyl-tRNA synthetase (cytosolic) [Caenorhabditis elegans]
 gi|33300482|emb|CAE17953.1| C. elegans protein Y80D3A.1, confirmed by transcript evidence
           [Caenorhabditis elegans]
 gi|33300622|emb|CAB60439.2| C. elegans protein Y80D3A.1, confirmed by transcript evidence
           [Caenorhabditis elegans]
          Length = 417

 Score = 40.4 bits (93), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 27/105 (25%), Positives = 46/105 (43%), Gaps = 13/105 (12%)

Query: 39  YIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL-MGGGTSIIGDPSFRDESRRMMRSQ 97
           Y G   ++ SLH GHL   +   WLQ+    P+ + M      +      DE+++M R  
Sbjct: 108 YTGRGASSGSLHLGHLVPFIFTKWLQEVFDVPLVIQMTDDEKFLWKDMKVDEAKKMAR-- 165

Query: 98  EIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLR 142
              EN++ I       I  G   T   + NN  ++C   Y ++++
Sbjct: 166 ---ENMKDI-------ISVGFDPTKTFIFNNFDYMCPPFYENIVK 200


>gi|124027763|ref|YP_001013083.1| tyrosyl-tRNA synthetase [Hyperthermus butylicus DSM 5456]
 gi|123978457|gb|ABM80738.1| Tyrosyl-tRNA synthetase [Hyperthermus butylicus DSM 5456]
          Length = 362

 Score = 40.4 bits (93), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 28/118 (23%), Positives = 53/118 (44%), Gaps = 4/118 (3%)

Query: 117 GTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNY 176
           G  ++   +++ E  +   +Y  +L ++    ++ RM    ++  R   E  L F +  Y
Sbjct: 103 GVERSKVKVVDAEDLVSDKEYWAILLKVAKSNTLARMKRALTIMGRRAEEAELDFSKLIY 162

Query: 177 MILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG 234
             +Q  D   L    D  + +GG DQ    +   D  E+L   K+ A+ +PL+T+  G
Sbjct: 163 PAMQVTDIFYL----DLDIALGGIDQRKAHMLARDTAEKLGRKKVIAVHTPLITSLQG 216


>gi|327311627|ref|YP_004338524.1| tyrosyl-tRNA synthetase [Thermoproteus uzoniensis 768-20]
 gi|326948106|gb|AEA13212.1| tyrosyl-tRNA synthetase [Thermoproteus uzoniensis 768-20]
          Length = 326

 Score = 39.7 bits (91), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 47/198 (23%), Positives = 82/198 (41%), Gaps = 20/198 (10%)

Query: 38  AYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQ 97
           AY+GY+     +H G L  +     L + G + + L     + I D    D +     + 
Sbjct: 27  AYVGYE-PVWPVHVGWLIWMFKARDLVEAGFEVLLLEATWHAWINDKG--DFASLAEHAA 83

Query: 98  EIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFE 157
            I+E   +I G F    K+  G+  A            KY +L+ ++    S+ R+    
Sbjct: 84  RIRELAARISGKF----KFKDGRELA---------ADPKYWELVVKVAKSTSLARIRRAI 130

Query: 158 SVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK 217
            +  R + E  L F +  Y  +Q  D   L    D  + +GG DQ    +   D+ E+L 
Sbjct: 131 PIMGRRQEEVELDFSKLLYPAMQVADMFYL----DVDVALGGLDQRRAHMLARDVAEKLG 186

Query: 218 TPKLFALTSPLLTTASGT 235
             K  ++ +P++T+ SG 
Sbjct: 187 LKKPASIHTPIVTSLSGV 204


>gi|305662965|ref|YP_003859253.1| tyrosyl-tRNA synthetase [Ignisphaera aggregans DSM 17230]
 gi|304377534|gb|ADM27373.1| tyrosyl-tRNA synthetase [Ignisphaera aggregans DSM 17230]
          Length = 361

 Score = 39.7 bits (91), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 28/119 (23%), Positives = 52/119 (43%), Gaps = 4/119 (3%)

Query: 117 GTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNY 176
           G   +   ++  E  +  + Y + +  I    S++R+    ++  R   E  L F +  Y
Sbjct: 103 GVNMSRVRIVYAEDIVSRVSYWEKVLRIAKSSSLSRIKRALTILGRRADEAELDFSKLIY 162

Query: 177 MILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT 235
            ++Q  D  E+    D  + +GG DQ    +   D+ E+L   K  A+ +PLL +  G 
Sbjct: 163 PLMQVADIFEM----DLDIALGGLDQRKAHMLARDVAEKLGFKKPIAIHTPLLPSLKGV 217


>gi|213021806|ref|ZP_03336253.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
          serovar Typhi str. 404ty]
          Length = 61

 Score = 39.3 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 18/47 (38%), Positives = 27/47 (57%)

Query: 6  SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAG 52
          S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH G
Sbjct: 8  SNLIKQLQERGLVAQVTDEDALAERLAQGPIALYCGFDPTADSLHLG 54


>gi|297185013|gb|ADI21122.1| tyrosyl-tRNA synthetase [uncultured gamma proteobacterium
           EB750_07C09]
          Length = 123

 Score = 38.9 bits (89), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 34/118 (28%), Positives = 53/118 (44%), Gaps = 6/118 (5%)

Query: 197 MGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPY 255
           MGG+DQ  N++ G  + +  +     A T PLL    G  KM K+    I + +   SP 
Sbjct: 1   MGGTDQKFNLLVGRHIQQSFEQEPQIAFTMPLLEGLDGVRKMSKSYDNYIGITE---SPN 57

Query: 256 NFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEITTMVH 311
             +    +I D  +  + + L+   + EI   R A  QGK   + K  +A EI +  H
Sbjct: 58  EMFGKLMSISDELMWRYFELLSFHSLGEIKNFRTAVDQGKNPRDIKFELAIEIVSRFH 115


>gi|302349168|ref|YP_003816806.1| Tyrosyl-tRNA synthetase [Acidilobus saccharovorans 345-15]
 gi|302329580|gb|ADL19775.1| Tyrosyl-tRNA synthetase [Acidilobus saccharovorans 345-15]
          Length = 358

 Score = 38.9 bits (89), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 28/111 (25%), Positives = 50/111 (45%), Gaps = 4/111 (3%)

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           ++ ET +    Y  L+ ++    S+ RM    ++  R   E  L   +  Y  +Q  D +
Sbjct: 112 VDAETMVSDKDYWALVLKVMKMTSLARMKRALTIMGRTMDEAELDSSKLVYPAMQVSDII 171

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTK 236
            +    D  + +GG DQ    +   ++ ER+   K+ AL +P+LT   G K
Sbjct: 172 YM----DLDIALGGLDQRKAHVLQREVAERMGRKKVIALHTPILTGLEGGK 218


>gi|313124873|ref|YP_004035137.1| tyrosyl-tRNA synthetase [Halogeometricum borinquense DSM 11551]
 gi|312291238|gb|ADQ65698.1| tyrosyl-tRNA synthetase [Halogeometricum borinquense DSM 11551]
          Length = 331

 Score = 38.5 bits (88), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 50/203 (24%), Positives = 87/203 (42%), Gaps = 23/203 (11%)

Query: 38  AYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQ 97
           AY+GY+  +  LH GH+     L  LQ+ G + + L+    + + D    D         
Sbjct: 32  AYVGYE-PSGVLHIGHMLTANKLIELQEAGFEVVVLLADVHAYLNDKGTFD--------- 81

Query: 98  EIQENIEKIKGIFSSFIKYGTGKTDA-LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSF 156
           EIQE   +++     F+ YG  +     +L +E  L     +D L  +    S++R    
Sbjct: 82  EIQETATRMQ---EQFVAYGLEEDQTEFVLGSEFQLDDDYTLD-LHALELETSLSRA--- 134

Query: 157 ESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL 216
           E   + +K   +++  +  Y ++QA D V L    D  L +GG +Q    +   D    +
Sbjct: 135 ERAMAEIKSGDTVTVAQAVYPLMQALDIVYL----DVDLAIGGMEQRKVHMLARDTLPSI 190

Query: 217 KTPKLFALTSPLLTTASGTKMGK 239
                  L +PL++  S T +GK
Sbjct: 191 DADAPTCLHTPLISDLS-TGVGK 212


>gi|70605926|ref|YP_254796.1| tyrosyl-tRNA synthetase [Sulfolobus acidocaldarius DSM 639]
 gi|108861907|sp|Q4JCH6|SYY_SULAC RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|68566574|gb|AAY79503.1| tyrosyl-tRNA synthetase [Sulfolobus acidocaldarius DSM 639]
          Length = 361

 Score = 38.1 bits (87), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 28/119 (23%), Positives = 52/119 (43%), Gaps = 4/119 (3%)

Query: 116 YGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFN 175
           +G   +   ++  E  + +I Y  L+ ++    S+ RM    ++  R   E  L   +  
Sbjct: 102 FGVDMSKLKVVYAEDLVENIDYWSLVVKVAKNTSLARMKRALTIMGRRSEEAELDTSKLI 161

Query: 176 YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG 234
           Y  +Q  D        D  + +GG+DQ    +   D+ E+L+  K+ A+ +PLL    G
Sbjct: 162 YPAMQVSDIF----FQDLDIALGGTDQRKAHMLARDVAEKLQRKKVIAIHTPLLVGLQG 216


>gi|146304899|ref|YP_001192215.1| tyrosyl-tRNA synthetase [Metallosphaera sedula DSM 5348]
 gi|145703149|gb|ABP96291.1| tyrosyl-tRNA synthetase [Metallosphaera sedula DSM 5348]
          Length = 352

 Score = 38.1 bits (87), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 27/119 (22%), Positives = 51/119 (42%), Gaps = 4/119 (3%)

Query: 116 YGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFN 175
           +G  ++   +++ E  +    Y  L+  +    S+ RM    ++  R   E  L   +  
Sbjct: 94  FGISRSKVHVIDAEDMVKDKDYWSLVIRVAKNTSLARMKRALTIMGRKADEAELDSSKLI 153

Query: 176 YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG 234
           Y  +Q  D   +    D  + +GG+DQ    +   D+ E+L   K+ A+ +PLL    G
Sbjct: 154 YPAMQVSDIFYM----DLDIALGGTDQRKAHMLARDVAEKLGKKKVIAIHTPLLVGLQG 208


>gi|312792380|ref|YP_004025303.1| hypothetical protein Calkr_0115 [Caldicellulosiruptor
           kristjanssonii 177R1B]
 gi|312179520|gb|ADQ39690.1| hypothetical protein Calkr_0115 [Caldicellulosiruptor
           kristjanssonii 177R1B]
          Length = 996

 Score = 37.7 bits (86), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 28/109 (25%), Positives = 47/109 (43%), Gaps = 4/109 (3%)

Query: 34  GVVTAYIGYD-LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRR 92
           G+VT Y+  + L        H  +L +L WL      P    GG  ++  DPS+R +   
Sbjct: 53  GLVTEYLSEEWLYLVKKCIEHAKKLNMLAWLYDEDKWPSGFAGGAVAL-KDPSYRHKFLV 111

Query: 93  MMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLL 141
           +++  +++++ E I        KY   K    M   + W     Y+DLL
Sbjct: 112 LLKEDQVEQDDEVISSFVHRNTKYIVAKR--TMKLGDKWFNGSCYVDLL 158


>gi|294636382|ref|ZP_06714770.1| tyrosine--tRNA ligase [Edwardsiella tarda ATCC 23685]
 gi|291090357|gb|EFE22918.1| tyrosine--tRNA ligase [Edwardsiella tarda ATCC 23685]
          Length = 142

 Score = 37.7 bits (86), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 34/131 (25%), Positives = 55/131 (41%), Gaps = 18/131 (13%)

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIH-----------SQHMPTISISKDEV 346
           A+ ++A E+T +VHG E  + A       F  S++              MP I     E+
Sbjct: 17  AQYVLAEEVTRLVHGAEGLQAAQRITHSLFSGSLNEMTEADFAQLAQDGMPMI-----EM 71

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
           S G  L   +V +    S  +AR+ + SNA+ +N    ++ +      D        L  
Sbjct: 72  SIGADLQQALVDSELQPSRGQARKTIASNAVTVNGEKQADPEYTFSDSDRLFGRYTLLRR 131

Query: 407 GKKNHIICHLC 417
           GKKN+  C +C
Sbjct: 132 GKKNY--CLIC 140


>gi|327401473|ref|YP_004342312.1| Tyrosyl-tRNA synthetase [Archaeoglobus veneficus SNP6]
 gi|327316981|gb|AEA47597.1| Tyrosyl-tRNA synthetase [Archaeoglobus veneficus SNP6]
          Length = 329

 Score = 37.4 bits (85), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 46/208 (22%), Positives = 82/208 (39%), Gaps = 29/208 (13%)

Query: 38  AYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQ 97
           AY+GY+  +  +H GHL  +  L  LQ  G   + L+    + + +    +E  R+    
Sbjct: 35  AYVGYE-PSGEIHLGHLMTVNKLIDLQNAGFDVVVLLADVHAYLNEKGDFEEIERIAEYN 93

Query: 98  EIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFE 157
           +             +FI  G  +     +   ++  S  Y+  + ++    ++NR     
Sbjct: 94  K------------QAFIALGLEENKTEFVLGSSYQLSRDYVLDVLKMARITTLNRARRSM 141

Query: 158 SVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK 217
              SR K +  +S  +  Y ++QA D   L  +    L +GG DQ       I +  R  
Sbjct: 142 DEVSRRKEDPMVS--QMVYPLMQALDIAHLKID----LAVGGMDQR-----KIHMLAREN 190

Query: 218 TPKL-----FALTSPLLTTASGTKMGKT 240
            P+L       L +P+L    G KM  +
Sbjct: 191 LPRLGYLSPVCLHTPILLGLDGQKMSSS 218


>gi|260829727|ref|XP_002609813.1| hypothetical protein BRAFLDRAFT_280343 [Branchiostoma floridae]
 gi|229295175|gb|EEN65823.1| hypothetical protein BRAFLDRAFT_280343 [Branchiostoma floridae]
          Length = 311

 Score = 37.0 bits (84), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 26/92 (28%), Positives = 43/92 (46%), Gaps = 2/92 (2%)

Query: 310 VHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEAR 369
           + G  ++E A+   + C D  +  Q +  I+I+  +V     L T + +  +    N  R
Sbjct: 188 LEGLPQSELASRLTLNCQDSYVEPQRIQNIAITVVDVFDESALSTSVKEELYKCYPNSKR 247

Query: 370 RHLKS--NAIKINNSIISNEKLQIKLQDFDST 399
            HLKS  N   ++ S   N  +QI L+DF  T
Sbjct: 248 AHLKSGGNFPYVSRSAEVNLYIQIHLRDFHGT 279


>gi|125772496|ref|XP_001357561.1| GA21996 [Drosophila pseudoobscura pseudoobscura]
 gi|195158992|ref|XP_002020367.1| GL13546 [Drosophila persimilis]
 gi|54637293|gb|EAL26695.1| GA21996 [Drosophila pseudoobscura pseudoobscura]
 gi|194117136|gb|EDW39179.1| GL13546 [Drosophila persimilis]
          Length = 431

 Score = 37.0 bits (84), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 24/124 (19%), Positives = 52/124 (41%), Gaps = 20/124 (16%)

Query: 39  YIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQE 98
           Y G   ++ SLH GHL   M+  WLQ+T   P+ +              D+ + + +  +
Sbjct: 121 YTGRGPSSGSLHVGHLIPFMMTKWLQETFDVPLVI-----------QLTDDEKTLWKDLK 169

Query: 99  IQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL--CSIKYIDLLREIGSFFSVNRMLSF 156
           +++ I+  +      +  G       + NN  ++  C   Y +++R       + + ++F
Sbjct: 170 VEDAIKLARENAKDIVAMGFDVNKTFIFNNLEFMGKCPAMYQNIIR-------IQKCVTF 222

Query: 157 ESVR 160
             V+
Sbjct: 223 NQVK 226


>gi|195394551|ref|XP_002055906.1| GJ10514 [Drosophila virilis]
 gi|194142615|gb|EDW59018.1| GJ10514 [Drosophila virilis]
          Length = 430

 Score = 37.0 bits (84), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 60/313 (19%), Positives = 117/313 (37%), Gaps = 49/313 (15%)

Query: 39  YIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQE 98
           Y G   ++ SLH GHL   ++  WLQ+T + P+ +              D+ + + +  +
Sbjct: 120 YTGRGPSSGSLHMGHLVPFIMTKWLQETFNVPLII-----------QLTDDEKTLWKDLK 168

Query: 99  IQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL--CSIKYIDLLREIGSFFSVNRMLSF 156
           I+E I+  +      +  G       + NN  ++  C   Y +++R       + + ++F
Sbjct: 169 IEEAIKLARENAKDIVAMGFDLNKTFIFNNLEFMGKCPALYQNIIR-------IQKCVTF 221

Query: 157 ESVRSRLKREQSLSFLEFNYMILQA-------YDFVELAKNYDCRLQMGGSDQWGNIICG 209
             V+       S    +  +   QA       + F+   K   C +     DQ       
Sbjct: 222 NQVKGIFGFGDSDIIGKIGFPAAQAAPALSSTFPFIFGNKKVHCLIPC-AIDQDPYFRMT 280

Query: 210 IDLGERLKTPKLFALTSPLLTTASGTKMGKTLS---GAIWLN---KEMTSPYNFWQY--- 260
            D+  RL  PK   + S       G K   + S    A++L    K++ +  N + +   
Sbjct: 281 RDVAPRLGFPKCALIHSSFFPALQGAKTKMSASEQNSAVFLTDTPKQIKNKINKYAFSGG 340

Query: 261 ------WRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ---GKE---INEAKKIIATEITT 308
                  R +     +  A +L    + + D++ +++   GK      E KK+    +T 
Sbjct: 341 RTTVEEHRQLGGIPEIDVAYQLLKFFLEDDDKLEEVRVAYGKGEMLTGEIKKLAIETVTP 400

Query: 309 MVHGREEAEKAAT 321
           +V   + A K  T
Sbjct: 401 IVEQHQAARKLVT 413


>gi|291529157|emb|CBK94743.1| ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase
           components [Eubacterium rectale M104/1]
          Length = 375

 Score = 37.0 bits (84), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 32/118 (27%), Positives = 53/118 (44%), Gaps = 12/118 (10%)

Query: 55  TQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFI 114
           T+LM  + +  TG  P +   G  S        DE +R +       N+ +IK     F 
Sbjct: 90  TELMTCYDVVATGRYPYTGRFGVLS--------DEDKRAVDEAMELVNVSQIKD--KDFT 139

Query: 115 KYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFL 172
           K   G+   +ML+    +C    I +L E  S+  +   L F S+  RLKR+++L+ +
Sbjct: 140 KISDGQRQRVMLSR--AICQQPEIIVLDEPTSYLDIKYKLEFLSILQRLKRQKNLTVI 195


>gi|195112475|ref|XP_002000798.1| GI22326 [Drosophila mojavensis]
 gi|193917392|gb|EDW16259.1| GI22326 [Drosophila mojavensis]
          Length = 432

 Score = 37.0 bits (84), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 26/124 (20%), Positives = 51/124 (41%), Gaps = 20/124 (16%)

Query: 39  YIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQE 98
           Y G   ++ SLH GHL   +L  WLQ+T   P+ +              D+ + + +  +
Sbjct: 122 YTGRGPSSGSLHVGHLVPFILTKWLQETFDVPLII-----------QLTDDEKTLWKDLK 170

Query: 99  IQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL--CSIKYIDLLREIGSFFSVNRMLSF 156
           I+E I   +      +  G       + NN  ++  C   Y +++R       + + ++F
Sbjct: 171 IEEAIRLARENAKDIVAMGFDLNKTFIFNNLEFMGKCPAFYQNIIR-------IQKCVTF 223

Query: 157 ESVR 160
             V+
Sbjct: 224 NQVK 227


>gi|284165941|ref|YP_003404220.1| tyrosyl-tRNA synthetase [Haloterrigena turkmenica DSM 5511]
 gi|284015596|gb|ADB61547.1| tyrosyl-tRNA synthetase [Haloterrigena turkmenica DSM 5511]
          Length = 331

 Score = 36.6 bits (83), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 46/195 (23%), Positives = 82/195 (42%), Gaps = 27/195 (13%)

Query: 38  AYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSII-GDPSFRDESRRMMRS 96
           AY+GY+  +  LH GHL     L  LQ+ G + + L+    + + G  +F          
Sbjct: 32  AYVGYE-PSGVLHLGHLLTANKLIDLQEAGMEVVVLLADVHAYLNGKGTF---------- 80

Query: 97  QEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSF 156
           +EI+E  E++K   + FI YG  +     +    +    +Y   L E+    ++NR    
Sbjct: 81  EEIRETAERMK---AQFIAYGLDEESTEFVYGSEFQLDEEYTLDLHELELSTTMNRA--- 134

Query: 157 ESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL 216
           +   + ++ +++       Y ++Q  D   L    D  L +GG DQ       + +  R 
Sbjct: 135 QRAMAEIQGDETAKVSHLVYPLMQTLDIEYL----DLDLAVGGLDQR-----KVHMLARE 185

Query: 217 KTPKLFALTSPLLTT 231
           K P++     P L T
Sbjct: 186 KLPEVDYEVRPALHT 200


>gi|289743725|gb|ADD20610.1| cytoplasmic tryptophanyl-tRNA synthetase [Glossina morsitans
           morsitans]
          Length = 430

 Score = 36.6 bits (83), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 25/124 (20%), Positives = 52/124 (41%), Gaps = 20/124 (16%)

Query: 39  YIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQE 98
           Y G   ++ SLH GHL   ++  WLQ+T   P+ +              D+ + + +  +
Sbjct: 118 YTGRGPSSESLHLGHLIPFIMTKWLQETFDVPLVI-----------QLTDDEKTLWKDLK 166

Query: 99  IQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL--CSIKYIDLLREIGSFFSVNRMLSF 156
           + E I+  +      +  G       + NN T++  C   Y +++R       + + ++F
Sbjct: 167 VDEAIKLARENAKDIVAMGFNVEKTFIFNNLTFMGQCPSMYQNIIR-------IQKCVTF 219

Query: 157 ESVR 160
             V+
Sbjct: 220 NQVK 223


>gi|146295483|ref|YP_001179254.1| hypothetical protein Csac_0424 [Caldicellulosiruptor
           saccharolyticus DSM 8903]
 gi|145409059|gb|ABP66063.1| hypothetical protein Csac_0424 [Caldicellulosiruptor
           saccharolyticus DSM 8903]
          Length = 997

 Score = 36.6 bits (83), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 27/109 (24%), Positives = 48/109 (44%), Gaps = 4/109 (3%)

Query: 34  GVVTAYIGYD-LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRR 92
           G+VT Y+  + L+       H  +L +L W       P    GG  ++  +PS+R +   
Sbjct: 53  GLVTEYLSEEWLSLVKKCIEHAKKLNMLAWFYDEDKWPSGFAGGAVAL-KNPSYRHKFLV 111

Query: 93  MMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLL 141
           +++  +I+++ E + G      KY   K    M   + W     Y+DLL
Sbjct: 112 LLKEDQIEQDDEVLSGFVHGGEKYIVAKR--TMKLGDKWFNRSCYVDLL 158


>gi|289580760|ref|YP_003479226.1| tyrosyl-tRNA synthetase [Natrialba magadii ATCC 43099]
 gi|289530313|gb|ADD04664.1| tyrosyl-tRNA synthetase [Natrialba magadii ATCC 43099]
          Length = 326

 Score = 36.2 bits (82), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 48/198 (24%), Positives = 82/198 (41%), Gaps = 30/198 (15%)

Query: 38  AYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSII-GDPSFRDESRRMMRS 96
           AY+GY+  +  LH GHL     L  LQ  G + + L+    + + G  +F          
Sbjct: 32  AYVGYE-PSGVLHLGHLLTANKLIDLQDAGMEVVVLLADVHAYLNGKGTF---------- 80

Query: 97  QEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSF 156
           +EI+E  E++K   + FI YG  + +   +    +    +Y   L E+    ++NR    
Sbjct: 81  EEIRETAEQMK---AQFIAYGLDEDNTEFVYGSEFQLDEEYTLDLHELELATTLNRA--- 134

Query: 157 ESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNII--------C 208
           +   + ++  ++       Y ++Q  D   L    D  L +GG DQ    +         
Sbjct: 135 QRAMAEIQGGETAKVSHVVYPLMQTLDIEYL----DLDLAVGGLDQRKVHMLAREELPEL 190

Query: 209 GIDLGERLKTPKLFALTS 226
           G D+   L TP +  LTS
Sbjct: 191 GYDVRPALHTPIIADLTS 208


Searching..................................................done


Results from round 2




>gi|254780949|ref|YP_003065362.1| tyrosyl-tRNA synthetase [Candidatus Liberibacter asiaticus str.
           psy62]
 gi|254040626|gb|ACT57422.1| tyrosyl-tRNA synthetase [Candidatus Liberibacter asiaticus str.
           psy62]
          Length = 418

 Score =  581 bits (1499), Expect = e-164,   Method: Composition-based stats.
 Identities = 418/418 (100%), Positives = 418/418 (100%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL
Sbjct: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
           FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK
Sbjct: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ
Sbjct: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT
Sbjct: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK
Sbjct: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG
Sbjct: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLCG 418
           FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLCG
Sbjct: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLCG 418


>gi|319784079|ref|YP_004143555.1| tyrosyl-tRNA synthetase [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317169967|gb|ADV13505.1| tyrosyl-tRNA synthetase [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 417

 Score =  553 bits (1426), Expect = e-155,   Method: Composition-based stats.
 Identities = 237/415 (57%), Positives = 315/415 (75%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           MPAFKSDFL  +SERGFIHQ S+   LD + ++  VTAYIG+D TA SLHAG L Q+M+L
Sbjct: 1   MPAFKSDFLRTMSERGFIHQTSDDAGLDNIFAKETVTAYIGFDATAKSLHAGSLIQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            WLQ+TGH+PI+LMGGGTS+IGDPSF+DE+R+++  Q+I++N+  I+  F  ++K+G+G 
Sbjct: 61  HWLQQTGHRPIALMGGGTSMIGDPSFKDEARKLLTPQDIEDNLAGIRRNFMPYLKFGSGP 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
            DA+M+NN  WL  I Y++ LR++G  FSVNRML+F+SV+ RL REQSLSFLEFNYMILQ
Sbjct: 121 NDAIMVNNADWLMEINYVNFLRDVGRHFSVNRMLAFDSVKLRLDREQSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVEL K   CRLQMGGSDQWGNII GIDLG R++  +L+ALT+PLLTT+SG KMGK+
Sbjct: 181 AYDFVELYKRLGCRLQMGGSDQWGNIINGIDLGRRMEDAQLYALTTPLLTTSSGAKMGKS 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
            SGA+WL+ EM SPY FWQYWRN +DADV  F K  TTLP+ E+ R+ +L G EINEAKK
Sbjct: 241 ASGAVWLDAEMLSPYEFWQYWRNTEDADVARFLKLYTTLPLDEVARLERLGGSEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+ATEIT ++HGR  AE+A+  A + F+    ++ +PT+ + K  +  G+G+L+L+V AG
Sbjct: 301 ILATEITALLHGRAAAEQASDTARKTFEEGALAESLPTVEVDKTALETGVGILSLLVTAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            A S  EARRH++  A+++N+  +S+E+  +  QD      +KLS GKK HI+  
Sbjct: 361 LAASNGEARRHVQGGAVRLNDEPVSDERRLVTPQDLSPENVVKLSLGKKKHILVR 415


>gi|209549500|ref|YP_002281417.1| tyrosyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM2304]
 gi|209535256|gb|ACI55191.1| tyrosyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM2304]
          Length = 418

 Score =  549 bits (1416), Expect = e-154,   Method: Composition-based stats.
 Identities = 244/415 (58%), Positives = 316/415 (76%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  FKSDFL  L ERGFIHQ+S+ R LD + ++  VTAYIGYD TASSLH GHLTQ+M+L
Sbjct: 1   MSEFKSDFLRTLKERGFIHQVSDERGLDDMFAKETVTAYIGYDPTASSLHVGHLTQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            WLQ TGH+PISLMGGGT ++GDPSF++E+R++M    I++NI  IK  FS+++ Y    
Sbjct: 61  HWLQATGHRPISLMGGGTGMVGDPSFKEEARQLMTIDTIEQNIASIKNCFSNYLDYDKSG 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
             ALM+NN  WL S+ Y++ LR++G  FSVNRMLSF+SV++RL REQSLSFLEFNYMILQ
Sbjct: 121 NAALMINNAEWLRSLNYLEFLRDVGRHFSVNRMLSFDSVKTRLDREQSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVELAK YDCRLQMGGSDQWGNI+ GIDLG R+ T +L+ALTSPLLTT+SG KMGK+
Sbjct: 181 AYDFVELAKRYDCRLQMGGSDQWGNIVNGIDLGHRMGTQQLYALTSPLLTTSSGAKMGKS 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
            SGA+WLN ++   Y+FWQYWRN +DADV  F K  TTLPM EI R++ L G E+NE KK
Sbjct: 241 ASGAVWLNADLLPVYDFWQYWRNTEDADVPRFLKLFTTLPMDEIARLSALGGSELNEVKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+ATE+TT++HGR  AE+AA  A + F+    S+++P++ I   E+  G+GLL+L+V+AG
Sbjct: 301 ILATEVTTILHGRPAAEQAAETARKTFEEGGLSENLPSVDIPATELDGGIGLLSLMVRAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            A S  EARRH++  A+++N+  +S+E+  I   +  + G IKLS GKK HI+  
Sbjct: 361 LAGSNGEARRHVQGGAVRVNDEAVSDERRLIGSSEITADGVIKLSLGKKKHILIR 415


>gi|86357873|ref|YP_469765.1| tyrosyl-tRNA synthetase [Rhizobium etli CFN 42]
 gi|86281975|gb|ABC91038.1| tyrosyl-tRNA synthetase protein [Rhizobium etli CFN 42]
          Length = 418

 Score =  549 bits (1415), Expect = e-154,   Method: Composition-based stats.
 Identities = 241/415 (58%), Positives = 313/415 (75%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  FKSDFL  L ERGFIHQ+S+   LD L ++ VVTAY+GYD TA+SLH G+L    +L
Sbjct: 1   MSEFKSDFLRTLKERGFIHQVSDESGLDDLFAKEVVTAYVGYDATATSLHIGNLISATML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
           +WLQ+TGH+PI+LMGGGTS++GDPSFRDE R+++  + I  NIE IK IFS  +++G G 
Sbjct: 61  YWLQETGHRPIALMGGGTSMVGDPSFRDEQRKLLTPEAIATNIEGIKKIFSRILRFGDGP 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           TDA M+NN  WL  + Y++ LR++G  FSVNRMLSF+SV+ RL REQSLSFLEFNYMI+Q
Sbjct: 121 TDAFMVNNADWLMKLNYVEFLRDVGRHFSVNRMLSFDSVKLRLDREQSLSFLEFNYMIMQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
            YDFVEL++ Y CRLQMGGSDQWGNII G+DLG R+ TP+L+ALT+PLLTT+SG KMGKT
Sbjct: 181 GYDFVELSRRYGCRLQMGGSDQWGNIINGVDLGHRMGTPQLYALTTPLLTTSSGAKMGKT 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
            SGA+WLN+++ SPY+FWQYWRN +DADV  F K  T LP+SEI R+  L G EINEAKK
Sbjct: 241 ASGAVWLNEDVFSPYDFWQYWRNTEDADVGRFLKIFTRLPLSEIARLEALGGAEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+ATE T +VHGR  AE +A  A   F+    ++++P++ I   E+  G+GLL+L+V+AG
Sbjct: 301 ILATEATAIVHGRVAAEASAETARTTFEEGRIAENLPSVEIPATELDGGIGLLSLMVRAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            A S  EARRH++  A+++N+  IS+E+  I   +  + G IKLS GKK HI+  
Sbjct: 361 LAGSNGEARRHVQGGAVRVNDEAISDERRLIGSGEITADGVIKLSLGKKKHILIR 415


>gi|13470335|ref|NP_101900.1| tyrosyl-tRNA synthetase [Mesorhizobium loti MAFF303099]
 gi|75544372|sp|Q98NS5|SYY_RHILO RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|14021073|dbj|BAB47686.1| tyrosyl-tRNA synthetase [Mesorhizobium loti MAFF303099]
          Length = 417

 Score =  548 bits (1413), Expect = e-154,   Method: Composition-based stats.
 Identities = 236/415 (56%), Positives = 309/415 (74%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           MPAFKSDFL  +SERGFIHQIS+   LD L ++  VTAY+GYD TA+SLH G+L    +L
Sbjct: 1   MPAFKSDFLRTMSERGFIHQISDETGLDQLFAKETVTAYVGYDATATSLHIGNLISATML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
           +WLQ+TGH+PI+LMGGGTS+IGDPSFRD+ R ++  + I  NIE IK IF   +++G G 
Sbjct: 61  YWLQETGHRPIALMGGGTSMIGDPSFRDDQRSLLTPEAIATNIEGIKRIFGRILRFGDGP 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
            DA+M+NN  WL  + Y++ LR++G  FSVNRML+F+SV+ RL REQSLSFLEFNYMILQ
Sbjct: 121 NDAIMVNNADWLMKLNYVEFLRDVGRHFSVNRMLTFDSVKLRLDREQSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
            YDFVELA+  +CRLQMGGSDQWGNII G+DLG R+ TP+L+ALT+PLLTT+SG KMGK+
Sbjct: 181 GYDFVELARRQNCRLQMGGSDQWGNIINGVDLGHRMGTPQLYALTTPLLTTSSGAKMGKS 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
             GA+WLN ++ SPY+FWQYWRN +DADV  F K  T LP+ EI R+A L G EINEAKK
Sbjct: 241 AKGAVWLNGDLFSPYDFWQYWRNTEDADVERFLKIFTRLPLPEIARLAALGGSEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+ATE T +VHGRE A +A   A + F+    +  +PT+   K  +  G+G+L+L+V AG
Sbjct: 301 ILATETTAIVHGREAANQAEETARKTFEEGALADTLPTVGADKAALEAGIGILSLLVTAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            A+S  EARRH++  A++IN+  +S+++  + LQD      +KLS GKK H++  
Sbjct: 361 LASSNGEARRHIQGGAVRINDQSVSDDRRMVTLQDLSPENVVKLSLGKKKHVLVR 415


>gi|254693653|ref|ZP_05155481.1| tyrosyl-tRNA synthetase [Brucella abortus bv. 3 str. Tulya]
 gi|261213920|ref|ZP_05928201.1| tyrosyl-tRNA synthetase [Brucella abortus bv. 3 str. Tulya]
 gi|260915527|gb|EEX82388.1| tyrosyl-tRNA synthetase [Brucella abortus bv. 3 str. Tulya]
          Length = 417

 Score =  547 bits (1410), Expect = e-153,   Method: Composition-based stats.
 Identities = 242/415 (58%), Positives = 315/415 (75%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  FKSDFL  LSERGFIHQIS+   LD L ++  VTAYIG+D TA SLHAG L Q+M+L
Sbjct: 1   MSGFKSDFLRTLSERGFIHQISDESGLDELLAKETVTAYIGFDPTAPSLHAGGLIQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
           +WLQ+TGHKP++LMGGGT ++GDPSF+DE+R++M    I EN+  IK +F++++ +G G 
Sbjct: 61  YWLQQTGHKPVALMGGGTGMVGDPSFKDEARKLMTEDTIAENMASIKRVFANYLTFGDGA 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
            DALM+NN  WL +I Y++ LR++G  FSVNRMLSF+SV+ RL REQSLSFLEFNYMILQ
Sbjct: 121 NDALMVNNGEWLRNINYLEFLRDVGRHFSVNRMLSFDSVKLRLDREQSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVEL K Y  RLQMGGSDQWGNI+ GIDLG R+ TP+L+ALTSPLLTTASG KMGK+
Sbjct: 181 AYDFVELNKRYGLRLQMGGSDQWGNIVNGIDLGHRMGTPQLYALTSPLLTTASGQKMGKS 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           L GAIWLN +M S Y+FWQYWRN +DADV  F K  TTLP+ EI R+A+L G EINEAKK
Sbjct: 241 LGGAIWLNADMLSAYDFWQYWRNTEDADVERFLKLYTTLPLDEIARLAELGGAEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+ATE+T M+HGR+ AE+ A  A + F+    S+++PT+ + K  ++ G+G+L L+V A 
Sbjct: 301 ILATEVTAMLHGRDAAEETAETARKTFEDGELSENLPTVGVHKATLNDGIGVLALMVLAE 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
             T+  EARRH++  A++IN+  +S+ ++ +     +  G IKLS GKK H++  
Sbjct: 361 LCTTNGEARRHVEGGAVRINDEPVSDPRMVVNAAALNDQGLIKLSLGKKRHVLIR 415


>gi|241204833|ref|YP_002975929.1| tyrosyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM1325]
 gi|240858723|gb|ACS56390.1| tyrosyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM1325]
          Length = 418

 Score =  547 bits (1409), Expect = e-153,   Method: Composition-based stats.
 Identities = 245/415 (59%), Positives = 316/415 (76%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  FKSDFL  L ERGFIHQ+S+   LD L ++  VTAYIG+D TA SLHAG L Q+M+L
Sbjct: 1   MSEFKSDFLRTLKERGFIHQVSDESGLDDLFAKETVTAYIGFDPTAPSLHAGSLIQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            W+QKTGH+ ISLMGGGT ++GDPSF++E+R++M    I+ NI  IK +FS+++ YG G 
Sbjct: 61  HWMQKTGHRAISLMGGGTGMVGDPSFKEEARQLMTVDTIEGNIASIKRVFSNYLNYGDGP 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
            DALM+NN  WL S+ Y++ LR++G  FSVNRMLSF+SV++RL REQSLSFLEFNYMILQ
Sbjct: 121 KDALMINNAEWLRSLNYLEFLRDVGKHFSVNRMLSFDSVKTRLDREQSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVELAK YDCRLQMGGSDQWGNI+ GIDLG R+ T +L+ALTSPLLTT+SG KMGK+
Sbjct: 181 AYDFVELAKRYDCRLQMGGSDQWGNIVNGIDLGHRMGTQQLYALTSPLLTTSSGAKMGKS 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
            +GAIWLN +M S Y+FWQYWRN +DADV  F K  TTLPM E+ R++ L G EINE KK
Sbjct: 241 ATGAIWLNADMLSAYDFWQYWRNTEDADVSRFLKLYTTLPMDEVARLSALGGSEINEVKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+ATE+T ++HGR  AE+AA  A + F+    S+++P++ I   E+  G+GLL+LIV+AG
Sbjct: 301 ILATEVTAILHGRPAAEQAAETARKTFEEGSLSENLPSVDIPATELDGGIGLLSLIVRAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            A S  EARRH++  A++IN+  +++E+  I   +  + G IKLS GKK HI+  
Sbjct: 361 LAASNGEARRHVQGGAVRINDEAVNDERKMIGSGEITADGVIKLSLGKKKHILIR 415


>gi|153009590|ref|YP_001370805.1| tyrosyl-tRNA synthetase [Ochrobactrum anthropi ATCC 49188]
 gi|151561478|gb|ABS14976.1| tyrosyl-tRNA synthetase [Ochrobactrum anthropi ATCC 49188]
          Length = 417

 Score =  547 bits (1409), Expect = e-153,   Method: Composition-based stats.
 Identities = 244/415 (58%), Positives = 318/415 (76%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  FKSDFL  LSERGFIHQIS+   LD L ++  VTAYIG+D TA SLHAG L Q+M+L
Sbjct: 1   MSGFKSDFLRTLSERGFIHQISDESGLDELLAKETVTAYIGFDPTAPSLHAGGLIQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            WLQ+TGHKP++LMGGGT ++GDPSF+DE+R++M    I ENI  IK +F++++ +G   
Sbjct: 61  HWLQQTGHKPVALMGGGTGMVGDPSFKDEARKLMTEDTIAENIAGIKRVFANYLTFGDSA 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           TDALM+NN  WL +I Y++ LR++G  FSVNRMLSF+SV++RL REQSLSFLEFNYMILQ
Sbjct: 121 TDALMVNNADWLRNINYLEFLRDVGRHFSVNRMLSFDSVKTRLDREQSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVEL+K YD RLQMGGSDQWGNII GIDLG R+ TP+L+ALTSPLLTTASG KMGK+
Sbjct: 181 AYDFVELSKRYDLRLQMGGSDQWGNIINGIDLGHRMGTPQLYALTSPLLTTASGQKMGKS 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           L GAIWLN EM S Y+FWQYWRN +DADV  F K  TTLP+ EI ++A L+G EINEAKK
Sbjct: 241 LGGAIWLNAEMLSAYDFWQYWRNTEDADVERFLKLYTTLPLDEIAKLAALEGVEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+ATE+T M+HGR+ A+++A  A + F+    S+++PT+ + K  ++ G+G+L L+V A 
Sbjct: 301 ILATEVTAMLHGRDAADESAETARKTFEDGELSENLPTVGVHKATLNSGIGVLALMVLAE 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
             T+  EARRH++  A++IN+  +S+ ++ +     +  G IKLS GKK H++  
Sbjct: 361 LCTTNGEARRHVEGGAVRINDEPVSDPRMTVDAGALNDQGVIKLSLGKKRHVLIR 415


>gi|315122362|ref|YP_004062851.1| tyrosyl-tRNA synthetase [Candidatus Liberibacter solanacearum
           CLso-ZC1]
 gi|313495764|gb|ADR52363.1| tyrosyl-tRNA synthetase [Candidatus Liberibacter solanacearum
           CLso-ZC1]
          Length = 418

 Score =  547 bits (1409), Expect = e-153,   Method: Composition-based stats.
 Identities = 332/417 (79%), Positives = 380/417 (91%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  FKSDFL+ILSERGFIHQISNP+ELD LC    +TAYIGYD TASSLH GHLTQLM+L
Sbjct: 1   MSVFKSDFLNILSERGFIHQISNPQELDKLCYNSTITAYIGYDPTASSLHVGHLTQLMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
           FWLQKTGH+PISLMGGGT +IGDPSF  E+RRM+  QEIQ+NI+ IK IFS+FI+YGTGK
Sbjct: 61  FWLQKTGHRPISLMGGGTGMIGDPSFISEARRMIGVQEIQKNIKSIKDIFSAFIRYGTGK 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
            DALMLNN+ WL  IKYID LRE+GS FSVNRMLSF+SVRSRL+REQSLSFLEFNYMILQ
Sbjct: 121 NDALMLNNDAWLSPIKYIDFLREVGSCFSVNRMLSFDSVRSRLQREQSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVEL+KNYDCRLQMGGSDQWGN+ICGI+LG RLKTP+LFALTSPLLTT+SG KMGKT
Sbjct: 181 AYDFVELSKNYDCRLQMGGSDQWGNMICGIELGGRLKTPQLFALTSPLLTTSSGAKMGKT 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
            +GAIWLNKEMTSPY+FWQYWRNIDDADVV+FAKRLTTLP+SEI R+ KLQ KE+NEAKK
Sbjct: 241 AAGAIWLNKEMTSPYDFWQYWRNIDDADVVNFAKRLTTLPISEIHRIEKLQEKELNEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           IIATEITTMVHG+ EAEKAATAAMECFDM+++S++MPTISISK E+++G+G+LTLIVKAG
Sbjct: 301 IIATEITTMVHGKAEAEKAATAAMECFDMNMYSENMPTISISKAEINQGIGILTLIVKAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           FA ST+EARRH++SNAIK+N+++ISNEK  I+L+DFDS G IKLSFGKK HIIC +C
Sbjct: 361 FAVSTSEARRHIQSNAIKVNDNVISNEKAHIELKDFDSAGVIKLSFGKKRHIICQVC 417


>gi|260460867|ref|ZP_05809117.1| tyrosyl-tRNA synthetase [Mesorhizobium opportunistum WSM2075]
 gi|259033444|gb|EEW34705.1| tyrosyl-tRNA synthetase [Mesorhizobium opportunistum WSM2075]
          Length = 417

 Score =  546 bits (1407), Expect = e-153,   Method: Composition-based stats.
 Identities = 234/415 (56%), Positives = 313/415 (75%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           MPAFKSDFL  +SERGFIHQ S+   LD L +   VTAYIG+D TA SLHAG L Q+M+L
Sbjct: 1   MPAFKSDFLRTMSERGFIHQTSDDAGLDNLFATETVTAYIGFDATAKSLHAGSLIQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            WLQ+TGH+PI+LMGGGTS+IGDPSF+DE+R+++  Q+I +N+  I+  F  ++K+G+G 
Sbjct: 61  HWLQQTGHRPIALMGGGTSMIGDPSFKDEARKLLTPQDIDDNLVGIRRNFVPYLKFGSGP 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
            DA+M+NN  WL  I Y++ LR++G  FSVNRML+F+SV+ RL REQSLSFLEFNYMILQ
Sbjct: 121 NDAIMVNNADWLMEINYVNFLRDVGRHFSVNRMLAFDSVKLRLDREQSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVEL K   CRLQMGGSDQWGNII GIDLG R++  +L+ALT+PLLTT+SG KMGK+
Sbjct: 181 AYDFVELYKRLGCRLQMGGSDQWGNIINGIDLGRRMEDAQLYALTTPLLTTSSGAKMGKS 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
            SGA+WL+  M SPY FWQYWRN +DADV  F K  TTLP+ E+ R+ +L G EIN+AKK
Sbjct: 241 ASGAVWLDASMLSPYEFWQYWRNTEDADVGRFLKLYTTLPLDEVARLGQLGGSEINDAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           ++ATEIT ++HGR  AE+A+  A + F+    ++ +PT+ +   ++  G+G+L+L+V AG
Sbjct: 301 VLATEITALLHGRAAAEQASDTARKTFEEGALAESLPTVEVENAKLEAGIGILSLLVTAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            A S  EARRH++  A+++N+  +S+E+  + LQD      +KLS G+K HI+  
Sbjct: 361 LAASNGEARRHVQGGAVRLNDQPVSDERRLVTLQDLSPENVVKLSLGRKKHILVR 415


>gi|75675860|ref|YP_318281.1| tyrosyl-tRNA synthetase [Nitrobacter winogradskyi Nb-255]
 gi|97201720|sp|Q3SS12|SYY_NITWN RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|74420730|gb|ABA04929.1| tyrosyl-tRNA synthetase [Nitrobacter winogradskyi Nb-255]
          Length = 417

 Score =  546 bits (1407), Expect = e-153,   Method: Composition-based stats.
 Identities = 227/415 (54%), Positives = 302/415 (72%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M AFKSDFL+ L ERGFIHQ S+   LD L S+  VTAY GYD TA SLH GHL  +M++
Sbjct: 1   MVAFKSDFLNTLQERGFIHQCSDFEGLDALASRNQVTAYTGYDCTAPSLHVGHLLSIMMM 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            WLQ+TG+KPI+LMGGGT+ +GDPS RDE+R+++   +I  N E IKG F  F+ +G GK
Sbjct: 61  HWLQQTGNKPIALMGGGTTRVGDPSGRDETRKILSYDQIDANKESIKGTFLKFLVFGDGK 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
            DA+M +N  WL  + YI++LR++G  FS+NRML+ +SV+ RL+REQ LSF+EFNYMILQ
Sbjct: 121 NDAIMTDNAEWLTRLNYIEMLRDVGRHFSINRMLTMDSVKMRLEREQELSFIEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           +YD+VELA+ + C LQMGGSDQWGNI+ G+DLG R+ T +L+ALT PLLTT+SG KMGKT
Sbjct: 181 SYDYVELARRHGCNLQMGGSDQWGNIVNGVDLGRRMGTHQLYALTCPLLTTSSGAKMGKT 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
            +GA+WLN  M   Y++WQYWRN++DADV  F K  T LPM EI ++A LQG EINEAKK
Sbjct: 241 AAGAVWLNATMLPVYDYWQYWRNVEDADVGRFLKLFTILPMGEIAKLAALQGSEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           ++ATE T ++HGR+EAEKAA  A   F+    S+ +PT+ I + E++ G G+L L VKAG
Sbjct: 301 VLATEATALLHGRDEAEKAADTARTTFEQGAISESLPTLDIPRSELASGAGVLALFVKAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
              S  EARR +K   +++N+  ++++K+ +        G IKLS GKK H++  
Sbjct: 361 LVASNGEARRQIKGGGLRVNDVAVADDKMVLTPDHLTPEGVIKLSMGKKRHVLLR 415


>gi|86750115|ref|YP_486611.1| tyrosyl-tRNA synthetase [Rhodopseudomonas palustris HaA2]
 gi|86573143|gb|ABD07700.1| tyrosyl-tRNA synthetase [Rhodopseudomonas palustris HaA2]
          Length = 418

 Score =  544 bits (1403), Expect = e-153,   Method: Composition-based stats.
 Identities = 230/418 (55%), Positives = 312/418 (74%), Gaps = 1/418 (0%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M AFKSDF+++L +RGF+HQ+S+P  LD L ++G V AY+GYD TA SLH GHL  +M+L
Sbjct: 1   MTAFKSDFMNVLQQRGFVHQMSDPESLDALAARGEVVAYVGYDCTAPSLHVGHLLSIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            WLQ TG+KPI+LMGGGT+ +GDPS RDE+R+++   +I  N E IKG F+ FIK+G G 
Sbjct: 61  HWLQATGNKPIALMGGGTTRVGDPSGRDETRKILTYDQIDANKESIKGTFAKFIKFGDGA 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           +DALM +N  WL  + YI++LR+IG  FS+NRML+ +SVR RL+REQ LSF+EFNYMILQ
Sbjct: 121 SDALMADNAEWLTKLNYIEMLRDIGRHFSINRMLTMDSVRMRLEREQELSFIEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           +YDFVELA+ Y+C LQMGGSDQWGNI+ G+DLG R+ T +L ALT PLLTT+SG KMGKT
Sbjct: 181 SYDFVELARRYNCNLQMGGSDQWGNIVTGVDLGRRMGTHQLHALTCPLLTTSSGAKMGKT 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
            +GA+WLN +M +PY++WQYWRN +DADV  F K  T LP+ E++R+AKLQG EINEAKK
Sbjct: 241 AAGAVWLNGDMLAPYDYWQYWRNTEDADVGRFLKLFTLLPIDEVERLAKLQGAEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVK-A 359
           ++ATE T ++HGRE AEKA   A   F+    +Q +P+I +++ E+  G+G+L    + A
Sbjct: 301 VLATEATALMHGRETAEKAEATARTTFEQGGTAQDLPSIDVTRAELDAGIGVLAAFAEKA 360

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           G   S  EARR +K+  +++N+ ++++EK+ +   D    G IKLS GKK H++  L 
Sbjct: 361 GLVASNGEARRQIKAGGLRVNDVLVTDEKMTLTPADLTPEGVIKLSMGKKKHVLLRLA 418


>gi|304391532|ref|ZP_07373474.1| tyrosyl-tRNA synthetase [Ahrensia sp. R2A130]
 gi|303295761|gb|EFL90119.1| tyrosyl-tRNA synthetase [Ahrensia sp. R2A130]
          Length = 416

 Score =  544 bits (1403), Expect = e-153,   Method: Composition-based stats.
 Identities = 231/415 (55%), Positives = 308/415 (74%), Gaps = 1/415 (0%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  FKSDFL+ L ERGFIHQIS+   LD L ++ VVTAYIG+D TA SLH G +TQ+MLL
Sbjct: 1   MSRFKSDFLATLDERGFIHQISDETGLDDLLTKEVVTAYIGFDATAKSLHVGSMTQIMLL 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            W Q+TGH+P++LMGGGT+++GDPS +DESR+MM ++ I +N   I+  F  F+ +G GK
Sbjct: 61  HWFQQTGHRPVALMGGGTTMVGDPSGKDESRQMMTAEIIADNKTSIQKCFDPFLTFGDGK 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
            DA+M +N  WL  + Y++ LR+ G   SVN ML+ +SV++RL REQ LSFLEFNYM LQ
Sbjct: 121 NDAIMADNADWLLDLNYVEFLRDYGKHLSVNAMLARDSVKTRLDREQHLSFLEFNYMCLQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYD+VEL++ YDCRLQ+GGSDQWGNI+ G+DLG R  TP+L+ALTSPLLTT+SG KMGK+
Sbjct: 181 AYDYVELSRRYDCRLQIGGSDQWGNILSGVDLGRRSGTPQLYALTSPLLTTSSGAKMGKS 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
            SGA+W+N++M   ++FWQYWRN +DADV  F K  TTLPM EI R++ L+G E+N+AKK
Sbjct: 241 ASGAVWMNEDMLPVFDFWQYWRNTEDADVPRFLKLFTTLPMDEIARLSALEGNELNDAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           ++ATE T MVHGR+ AEKAA  A + F+    S  +PTIS+   +   G G+L L+V AG
Sbjct: 301 VLATETTAMVHGRDAAEKAAETARQTFEQGTVSADLPTISVPAGDFEAGTGILGLLVTAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            A S  EARRH+K  A+K+N+  +S+E++ +    F + G +KLSFGKK H++  
Sbjct: 361 LAGSNGEARRHIKGGAVKVNDQAVSDERMMLDKS-FLTDGAVKLSFGKKRHVLIR 414


>gi|39935526|ref|NP_947802.1| tyrosyl-tRNA synthetase [Rhodopseudomonas palustris CGA009]
 gi|81562733|sp|Q6N703|SYY_RHOPA RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|39649379|emb|CAE27901.1| tyrosyl-tRNA synthetase [Rhodopseudomonas palustris CGA009]
          Length = 418

 Score =  544 bits (1403), Expect = e-153,   Method: Composition-based stats.
 Identities = 237/418 (56%), Positives = 312/418 (74%), Gaps = 1/418 (0%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M AFKSDF+++L  RGFIHQIS+P  LD L ++G V AY+GYD TA+SLH GHL  +M+L
Sbjct: 1   MTAFKSDFMNVLQSRGFIHQISDPDSLDALAAKGEVVAYVGYDCTAASLHVGHLLSIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            WLQ TG+KPI+LMGGGT+ +GDPS RDE+R+++  ++I  N E IKG FS FIK+G G 
Sbjct: 61  HWLQATGNKPIALMGGGTTRVGDPSGRDETRKILTYEQIDANKESIKGTFSKFIKFGDGH 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           +DALM +N  WL  + YI++LREIG  FS+NRML+ +SV+ RL REQ LSF+EFNYMILQ
Sbjct: 121 SDALMADNAEWLTKLNYIEMLREIGRHFSINRMLTMDSVKLRLDREQELSFIEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           +YDFVELA+ Y C LQMGGSDQWGNI+ G+DLG R+ T +L ALT PLLTTASG KMGKT
Sbjct: 181 SYDFVELARRYKCNLQMGGSDQWGNIVTGVDLGRRMGTHQLHALTCPLLTTASGAKMGKT 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
            +GA+WLN +M +PY++WQYWRN +DADV  F K  T LPM EI+R++KLQG EIN+AKK
Sbjct: 241 AAGAVWLNGDMLAPYDYWQYWRNTEDADVGRFLKLFTLLPMDEIERLSKLQGAEINDAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVK-A 359
           I+ATE T ++HGRE A+KA T A   F+    +Q +P++ IS+ E+  G+G+L    +  
Sbjct: 301 ILATEATALMHGREAADKAETTARTTFEQGGTAQDLPSVEISRGELDAGIGVLVAFAEKT 360

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           G   S  EARR +K+  +K+N++ +++EK+ +   D  S G IKLS GKK H++  L 
Sbjct: 361 GLVASNGEARRQIKAGGLKVNDAPVTDEKMTLTATDLSSDGVIKLSMGKKKHVLLRLA 418


>gi|15965492|ref|NP_385845.1| tyrosyl-tRNA synthetase [Sinorhizobium meliloti 1021]
 gi|307302613|ref|ZP_07582369.1| tyrosyl-tRNA synthetase [Sinorhizobium meliloti BL225C]
 gi|307318460|ref|ZP_07597894.1| tyrosyl-tRNA synthetase [Sinorhizobium meliloti AK83]
 gi|81634526|sp|Q92PK5|SYY_RHIME RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|15074673|emb|CAC46318.1| Probable tyrosyl-tRNA synthetase [Sinorhizobium meliloti 1021]
 gi|306895800|gb|EFN26552.1| tyrosyl-tRNA synthetase [Sinorhizobium meliloti AK83]
 gi|306902977|gb|EFN33568.1| tyrosyl-tRNA synthetase [Sinorhizobium meliloti BL225C]
          Length = 417

 Score =  543 bits (1399), Expect = e-152,   Method: Composition-based stats.
 Identities = 248/415 (59%), Positives = 315/415 (75%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  FKSDFL  LSERGFIHQ S+   LD L     VTAYIG+D TA+SLHAG L Q+M+L
Sbjct: 1   MSEFKSDFLHTLSERGFIHQTSDDAGLDQLFRTETVTAYIGFDPTAASLHAGGLIQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            WLQ TGH+PISLMGGGT ++GDPSF+DE+R++M  + I  NI  IK +FS++++YG G 
Sbjct: 61  HWLQATGHRPISLMGGGTGMVGDPSFKDEARQLMTPETIAANIASIKTVFSNYLRYGDGP 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
            DALM+NN  WL  I Y++ LR++G  FSVNRMLSF+SV+ RL+REQSLSFLEFNYMILQ
Sbjct: 121 KDALMINNADWLLGINYLEFLRDVGRHFSVNRMLSFDSVKMRLEREQSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVEL +   CRLQMGGSDQWGNI+ GIDLG R+ TP+L+ALTSPLLTTASG KMGK+
Sbjct: 181 AYDFVELYERTGCRLQMGGSDQWGNIVNGIDLGHRMGTPQLYALTSPLLTTASGAKMGKS 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           LSGA+WLN +M  PY FWQYWRN +DADV  F K  TTLPM+EI+R++KL G EINE KK
Sbjct: 241 LSGAVWLNPDMLGPYEFWQYWRNTEDADVARFLKLYTTLPMAEINRLSKLGGSEINEVKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           ++ATE+T M+HGR  AE+AA  A + F+    ++++P++ +   E+  G+GLLTL+V+AG
Sbjct: 301 VLATEVTAMLHGRAAAEQAAETARKTFEEGALAENLPSVEVPAPELESGLGLLTLLVRAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            A S  EARRH++  A++IN+  +S+E+  I   D    G IKLS GKK H++  
Sbjct: 361 LAASNGEARRHVQGGAVRINDDQVSDERRVIGSGDVTGDGVIKLSLGKKKHLLVR 415


>gi|49474204|ref|YP_032246.1| tyrosyl-tRNA synthetase [Bartonella quintana str. Toulouse]
 gi|81647075|sp|Q6FZW4|SYY_BARQU RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|49239708|emb|CAF26084.1| Tyrosyl-tRNA synthetase [Bartonella quintana str. Toulouse]
          Length = 417

 Score =  542 bits (1398), Expect = e-152,   Method: Composition-based stats.
 Identities = 249/415 (60%), Positives = 320/415 (77%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M AFKSDFL I+SERGFIHQIS+ + LD L S+ VV+AYIG+D TASSLHAG L Q+M+L
Sbjct: 1   MLAFKSDFLHIMSERGFIHQISDEKGLDALFSKEVVSAYIGFDPTASSLHAGSLLQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            WLQKTGH+PI+LMGGGT +IGDPSF+DE+R ++   +I  NI  IK +F++++ +G  +
Sbjct: 61  HWLQKTGHRPIALMGGGTGLIGDPSFKDEARPLLTQDDIATNIVSIKKVFANYLTFGEKE 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           TDA ++NN  WLC + Y++ LR++G  FS+NRMLSF+SVR RL+RE SLSFLEFNYMILQ
Sbjct: 121 TDACIINNAEWLCKLNYLEFLRDVGKHFSINRMLSFDSVRLRLEREHSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVEL K Y  R+QMGGSDQWGNII GI+LG RL TP+L+A TSPLLTT+SG KMGK+
Sbjct: 181 AYDFVELYKRYGLRMQMGGSDQWGNIINGIELGHRLGTPQLYAFTSPLLTTSSGAKMGKS 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           L+GA+WLN +M SPY FWQYWRN +DADV  F K  TTLPM EI +++ LQG EINEAKK
Sbjct: 241 LNGAVWLNADMLSPYQFWQYWRNTEDADVTRFLKLYTTLPMDEILKLSALQGTEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+ATEIT M+HGR+ A  AA  A + F+     +++PTI I+  ++  G GLL L+V+AG
Sbjct: 301 ILATEITAMLHGRDLANTAAKTARKTFEEKTFGENLPTIEINASDLKTGAGLLALLVQAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            A S +EARRH++   I++N+ II +E   I  +D ++ G IKLSFGKK H++  
Sbjct: 361 LAKSNSEARRHIQGGGIRVNDQIIEDETCLILEEDINAQGIIKLSFGKKKHVLIK 415


>gi|90424342|ref|YP_532712.1| tyrosyl-tRNA synthetase [Rhodopseudomonas palustris BisB18]
 gi|90106356|gb|ABD88393.1| tyrosyl-tRNA synthetase [Rhodopseudomonas palustris BisB18]
          Length = 418

 Score =  542 bits (1396), Expect = e-152,   Method: Composition-based stats.
 Identities = 225/416 (54%), Positives = 308/416 (74%), Gaps = 1/416 (0%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M AFKSDFL++L  RGFIHQIS+P  LD L ++G V +Y+GYD TA+SLH GHL  +M+L
Sbjct: 1   MTAFKSDFLNVLQSRGFIHQISDPDSLDALATRGEVVSYVGYDCTAASLHVGHLLSIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            WLQ TG+KPI+LMGGGT+ +GDPS RDE+R+++  ++I  N + IKG F+ FI++G GK
Sbjct: 61  HWLQATGNKPIALMGGGTTRVGDPSGRDETRKILTYEQIDANKDSIKGTFAKFIRFGDGK 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           +DA+M +N  WL  + YI++LR++G  FS+NRML+ +SV+ RL+REQ LSF+EFNYMILQ
Sbjct: 121 SDAVMADNAEWLTKLNYIEMLRDVGRHFSINRMLTMDSVKMRLEREQELSFIEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           +YDFVELA+ Y C LQMGGSDQWGNI+ G+DLG R+ T +L ALT PLLTT+SG KMGKT
Sbjct: 181 SYDFVELARRYGCNLQMGGSDQWGNIVTGVDLGRRMGTHQLHALTCPLLTTSSGAKMGKT 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
            +GA+WLN +M S Y++WQYWRN +DADV  F K  T LP+ E+ R+A LQG++INEAKK
Sbjct: 241 AAGAVWLNGDMLSAYDYWQYWRNTEDADVERFLKLFTLLPLDEVARLAALQGQDINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVK-A 359
           I+ATE T ++HGRE A+KA   A   F+    +  +PT+ +S+ E+  G+G+L    +  
Sbjct: 301 ILATEATALIHGREAADKAEATARTTFEQGGTASDLPTVELSRAELDAGLGVLVAFAEKT 360

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           G   S  EARR +K+  +K+N+  +++EK+ +   D  + G IKLS GKK H++  
Sbjct: 361 GLVASNGEARRQIKAGGLKVNDVAVTDEKMALTAADLTADGVIKLSMGKKKHVLLR 416


>gi|192291117|ref|YP_001991722.1| tyrosyl-tRNA synthetase [Rhodopseudomonas palustris TIE-1]
 gi|192284866|gb|ACF01247.1| tyrosyl-tRNA synthetase [Rhodopseudomonas palustris TIE-1]
          Length = 418

 Score =  541 bits (1395), Expect = e-152,   Method: Composition-based stats.
 Identities = 236/418 (56%), Positives = 310/418 (74%), Gaps = 1/418 (0%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M AFKSDF+++L  RGFIHQIS+P  LD L ++G V AY+GYD TA+SLH GHL  +M+L
Sbjct: 1   MTAFKSDFMNVLQSRGFIHQISDPDSLDALAAKGEVVAYVGYDCTAASLHVGHLLSIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            WLQ TG+KPI+LMGGGT+ +GDPS RDE+R+++  ++I  N E IKG FS FIK+G G 
Sbjct: 61  HWLQATGNKPIALMGGGTTRVGDPSGRDETRKILTYEQIDANKESIKGTFSKFIKFGDGH 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           +DALM +N  WL  + YI++LREIG  FS+NRML+ +SV+ RL REQ LSF+EFNYMILQ
Sbjct: 121 SDALMADNAEWLTKLNYIEMLREIGRHFSINRMLTMDSVKLRLDREQELSFIEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           +YDFVELA+ Y C LQMGGSDQWGNI+ G+DLG R+ T +L ALT PLLTTASG KMGKT
Sbjct: 181 SYDFVELARRYKCNLQMGGSDQWGNIVTGVDLGRRMGTHQLHALTCPLLTTASGAKMGKT 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
            +GA+WLN +M +PY++WQYWRN +DADV  F K  T LPM EI+R++KLQG EIN+AKK
Sbjct: 241 AAGAVWLNGDMLAPYDYWQYWRNTEDADVGRFLKLFTLLPMDEIERLSKLQGAEINDAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVK-A 359
           I+ATE T ++HGRE A+KA   A   F+    +Q +P++ IS+ E+  G+G+L    +  
Sbjct: 301 ILATEATALMHGREAADKAEATARTTFEQGGTAQDLPSVEISRGELDAGIGVLVAFAEKT 360

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           G   S  EARR +K+  +K+N++ + +EK+ +   D  S G IKLS GKK H++  L 
Sbjct: 361 GLVASNGEARRQIKAGGLKVNDAPVIDEKMTLTATDLSSDGVIKLSMGKKKHVLLRLA 418


>gi|27379441|ref|NP_770970.1| tyrosyl-tRNA synthetase [Bradyrhizobium japonicum USDA 110]
 gi|81737266|sp|Q89M63|SYY_BRAJA RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|27352592|dbj|BAC49595.1| tyrosyl-tRNA synthetase [Bradyrhizobium japonicum USDA 110]
          Length = 417

 Score =  541 bits (1394), Expect = e-151,   Method: Composition-based stats.
 Identities = 229/415 (55%), Positives = 304/415 (73%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M AFKSDFL+IL ERGFIHQ S+   LD L ++G  TAY+GYD TA SLH G+   +M+L
Sbjct: 1   MTAFKSDFLNILQERGFIHQCSDFEGLDALAAKGEATAYVGYDCTARSLHIGNYLTMMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            WLQ++G+KPI+LMGGGT+++GDPS +DE+R M    EI+ N E I+G+F+  ++YG GK
Sbjct: 61  HWLQQSGNKPITLMGGGTTMVGDPSGKDETRAMRTVAEIEANKESIRGVFAKVLRYGDGK 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           +DA+ML+N  WL  + +I++LR++G  FSVNRML+ +SVR RL+REQ +SF+EFNYM+ Q
Sbjct: 121 SDAVMLDNAEWLTKLNWIEMLRDVGRHFSVNRMLTMDSVRLRLEREQEMSFIEFNYMVCQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVELAK   C+LQMGGSDQWGNII G+DLG R+ T +LFALT+PLLTTASG KMGKT
Sbjct: 181 AYDFVELAKRTGCKLQMGGSDQWGNIIMGVDLGRRMGTHQLFALTTPLLTTASGAKMGKT 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
             GA+WLN +  SPY+FWQYWRN +DADV  F K  TTLPMSEI ++  L G EINEAKK
Sbjct: 241 AQGAVWLNADQFSPYDFWQYWRNTEDADVGKFLKLFTTLPMSEIGKLEALGGSEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           ++ATE T ++HGR+ A +AA  A   F+    ++ +PT+ I + E+  G G+L   VKAG
Sbjct: 301 VLATEATALLHGRDAANEAAETARRTFEEGALAESLPTVEIPRGELDAGFGVLNAFVKAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
              S  EARR +K   +++N+  ++++K+ +        G IKLSFGKK HI+  
Sbjct: 361 LVASNGEARRQIKGGGLRVNDEPVTDDKMALSAAHLTPEGVIKLSFGKKKHILIK 415


>gi|299133781|ref|ZP_07026975.1| tyrosyl-tRNA synthetase [Afipia sp. 1NLS2]
 gi|298591617|gb|EFI51818.1| tyrosyl-tRNA synthetase [Afipia sp. 1NLS2]
          Length = 417

 Score =  540 bits (1393), Expect = e-151,   Method: Composition-based stats.
 Identities = 232/415 (55%), Positives = 307/415 (73%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M A+KSDFL++L +RG IHQIS+P  LD  C++G +TAY+GYD TA+SLH G+L  + +L
Sbjct: 1   MTAYKSDFLNVLEQRGLIHQISDPAALDDACTKGPITAYVGYDATATSLHIGNLISVTML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
           +WLQ+TGH+PI+LMGGGTS++GDPSFRDE R+++    I  NIE IK IF   ++YG G 
Sbjct: 61  YWLQQTGHRPITLMGGGTSMVGDPSFRDEQRKLLDEATIASNIEGIKKIFGRILRYGEGA 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           TDALM+NN  WL  + Y+  LR++G +FSVNRMLSF+SV+ RL REQSLSFLEFNYMI+Q
Sbjct: 121 TDALMINNAEWLLKLNYVSFLRDVGRYFSVNRMLSFDSVKLRLDREQSLSFLEFNYMIMQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
            YDFVE+ + Y C LQMGGSDQWGNII G+DL  R+  P+L+ALT+PLLTT+SG KMGKT
Sbjct: 181 GYDFVEINRRYGCILQMGGSDQWGNIINGVDLSHRMGGPQLYALTTPLLTTSSGAKMGKT 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
             GA+WLN ++ SPY+FWQY+RN +DADV  F K  T LP++EI R+ KL G EINEAKK
Sbjct: 241 AKGAVWLNGDVFSPYDFWQYFRNTEDADVGRFLKVFTRLPLNEIARLEKLGGAEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+ATE T +VHGR  A++AA  A   F+    +Q++PT+ IS+ E+  G  +L L VKAG
Sbjct: 301 ILATEATAVVHGRVAADEAAETARRTFEEGAIAQNLPTLEISRGELESGASVLALFVKAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
              S  EARR +K   I++N++ ++++K+ +        G IKLS GKK H++  
Sbjct: 361 LVASNGEARRQIKGGGIRVNDTPVTDDKMLLTPDVLTPEGVIKLSLGKKRHVLLK 415


>gi|150396686|ref|YP_001327153.1| tyrosyl-tRNA synthetase [Sinorhizobium medicae WSM419]
 gi|150028201|gb|ABR60318.1| tyrosyl-tRNA synthetase [Sinorhizobium medicae WSM419]
          Length = 417

 Score =  540 bits (1392), Expect = e-151,   Method: Composition-based stats.
 Identities = 248/415 (59%), Positives = 314/415 (75%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  FKSDFL  LSERGFIHQ S+   LD L     VTAYIG+D TA+SLHAG L Q+M+L
Sbjct: 1   MSEFKSDFLHTLSERGFIHQTSDNGGLDQLFLTETVTAYIGFDPTAASLHAGGLIQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            WLQ TGH+PISLMGGGT ++GDPSF+DE+R++M  + I  NI  IK +FS+++KYG G 
Sbjct: 61  HWLQATGHRPISLMGGGTGMVGDPSFKDEARQLMTPETIAANIASIKTVFSNYLKYGDGP 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
            DALM+NN  WL  I Y++ LR++G  FSVNRMLSF+SV+ RL+REQSLSFLEFNYMILQ
Sbjct: 121 KDALMINNADWLLGINYLEFLRDVGRHFSVNRMLSFDSVKMRLEREQSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVEL +   CRLQMGGSDQWGNI+ GIDLG R+ TP+L+ALTSPLLTTASG KMGK+
Sbjct: 181 AYDFVELYQRTGCRLQMGGSDQWGNIVNGIDLGHRMGTPQLYALTSPLLTTASGAKMGKS 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           LSGA+WLN +M  PY FWQYWRN +DADV  F K  TTLPM+EIDR++KL G EINE KK
Sbjct: 241 LSGAVWLNPDMLGPYEFWQYWRNTEDADVTRFLKLYTTLPMAEIDRLSKLGGSEINEVKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           ++ATE+T M+HGR  AE+AA  A + F+    ++++P+I +   E   G+GLL L+V+AG
Sbjct: 301 VLATEVTAMLHGRTAAEQAAETARKTFEEGALAENLPSIEVPAREFESGLGLLALMVRAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            A S  EARRH++  A++IN+  +++E+  +  +D    G IKLS GKK H++  
Sbjct: 361 LAASNGEARRHVQGGAVRINDDQVTDERRVVGSRDVSGDGVIKLSLGKKKHLLVR 415


>gi|91976924|ref|YP_569583.1| tyrosyl-tRNA synthetase [Rhodopseudomonas palustris BisB5]
 gi|91683380|gb|ABE39682.1| tyrosyl-tRNA synthetase [Rhodopseudomonas palustris BisB5]
          Length = 418

 Score =  539 bits (1388), Expect = e-151,   Method: Composition-based stats.
 Identities = 220/416 (52%), Positives = 308/416 (74%), Gaps = 1/416 (0%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M AFKSDF+++L +RGFIHQIS+P  LD L S+  V AY+GYD TASSLH GHL  +M+L
Sbjct: 1   MTAFKSDFMNVLQQRGFIHQISDPESLDALASRREVVAYVGYDCTASSLHVGHLLSIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            WLQ TG+KP++LMGGGT+ +GDPS RDE+R+++  ++I+ N + IK +F++FI +G G 
Sbjct: 61  HWLQATGNKPVALMGGGTTRVGDPSGRDETRKILSLEQIEANKDSIKRVFANFITFGDGG 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
             ALM++N  WL  + YI++LR++G  FSVNRML+ +SVR RL+REQ LSF+EFNYMILQ
Sbjct: 121 NKALMVDNADWLTKLNYIEMLRDLGRHFSVNRMLTMDSVRMRLEREQELSFIEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           +YD+VEL++ + C LQMGGSDQWGNI+ G+DLG R+ T +L ALT PLLTT+SG KMGKT
Sbjct: 181 SYDYVELSRRHGCNLQMGGSDQWGNIVTGVDLGRRMGTQQLHALTCPLLTTSSGAKMGKT 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
            +GA+WLN +M   Y++WQYWRN +DADV  F K  T LP+ +I+R++KLQG EINEAKK
Sbjct: 241 AAGAVWLNGDMLPAYDYWQYWRNTEDADVGRFLKLFTLLPIDDIERLSKLQGAEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVK-A 359
           I+ATE T +VHGR+ A+KA   A   F+    +Q +P++ +++ E+  G+ +L    + +
Sbjct: 301 ILATEATALVHGRDAADKAEATARTTFEQGGTAQDLPSVDVARAELDAGLSVLAAFAEKS 360

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           G   S  EARR +K+  +K+N+  +++EK+ +   D  + G IKLS GKK H++  
Sbjct: 361 GLVASNGEARRQIKAGGLKVNDVPVTDEKMALTAADLTADGVIKLSMGKKKHVLLR 416


>gi|49475630|ref|YP_033671.1| tyrosyl-tRNA synthetase [Bartonella henselae str. Houston-1]
 gi|81647882|sp|Q6G3B6|SYY_BARHE RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|49238437|emb|CAF27665.1| Tyrosyl-tRNA synthetase [Bartonella henselae str. Houston-1]
          Length = 417

 Score =  538 bits (1386), Expect = e-151,   Method: Composition-based stats.
 Identities = 247/415 (59%), Positives = 322/415 (77%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M AFKSDFL+I+SERGFIHQIS+ + LD L S+ VV+AYIG+D TASSLHAG L Q+M+L
Sbjct: 1   MLAFKSDFLNIMSERGFIHQISDEKGLDALFSKEVVSAYIGFDPTASSLHAGSLLQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
           +WLQKTGH+PI LMGGGT +IGDPSF+DE+RR++   +I  NI  IK +F+ ++ +G  +
Sbjct: 61  YWLQKTGHRPIVLMGGGTGLIGDPSFKDEARRLLTQDDIAANIADIKKVFARYLTFGERE 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           TD+ ++NN  WLC++ Y++ LR+IG  FSVNRMLSF+SVR RL+RE SLSFLEFNYMILQ
Sbjct: 121 TDSCIVNNAEWLCTLNYLEFLRDIGKHFSVNRMLSFDSVRLRLEREHSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVEL K Y  R+QMGGSDQWGNII GI+LG RL TP+L+ALTSPLLTT+SG KMGK+
Sbjct: 181 AYDFVELYKRYGLRMQMGGSDQWGNIINGIELGHRLGTPQLYALTSPLLTTSSGAKMGKS 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           L+GA+WLN +M SPY FWQYWRN +DADV  F K  T LPM EI +++ LQG EINEAKK
Sbjct: 241 LNGAVWLNADMLSPYQFWQYWRNTEDADVTRFLKLYTPLPMDEILKLSALQGTEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+ATEIT M+HGR+ A   A  A + F+     +++PT  I+ +++  G GLL L+V+AG
Sbjct: 301 ILATEITAMLHGRDLANAVAETARKTFEERTLGENLPTFEINANDLKMGTGLLILLVQAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            + S +EARRH++   +++N+ II +E   I+ +D ++ G IKLSFGKK H++  
Sbjct: 361 LSKSNSEARRHIQGGGVRVNDHIIEDETHLIREEDINAQGIIKLSFGKKKHVLIK 415


>gi|239831801|ref|ZP_04680130.1| tyrosyl-tRNA synthetase [Ochrobactrum intermedium LMG 3301]
 gi|239824068|gb|EEQ95636.1| tyrosyl-tRNA synthetase [Ochrobactrum intermedium LMG 3301]
          Length = 417

 Score =  537 bits (1385), Expect = e-150,   Method: Composition-based stats.
 Identities = 245/415 (59%), Positives = 318/415 (76%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  FKSDFL  LSERGFIHQIS+   LD L ++  VTAYIG+D TA SLHAG L Q+M+L
Sbjct: 1   MSGFKSDFLRTLSERGFIHQISDESGLDELLAKETVTAYIGFDPTAPSLHAGGLIQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            WLQ+TGH+P++LMGGGT ++GDPSF+DE+R++M    I ENI  IK +F++++ +G G 
Sbjct: 61  HWLQQTGHRPVALMGGGTGMVGDPSFKDEARKLMTEDTIVENIAGIKRVFANYLTFGDGP 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           TDALM+NN  WL +I Y++ LR++G  FSVNRMLSF+SV++RL REQSLSFLEFNYMILQ
Sbjct: 121 TDALMVNNADWLRNINYLEFLRDVGRHFSVNRMLSFDSVKTRLDREQSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVEL K +D RLQMGGSDQWGNII GIDLG R+ TP+L+ALTSPLLTTASG KMGK+
Sbjct: 181 AYDFVELNKRHDIRLQMGGSDQWGNIINGIDLGHRMGTPQLYALTSPLLTTASGQKMGKS 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           L GAIWLN EM S Y+FWQYWRN +DADV  F K  TTLP+ EI ++A L+G EINEAKK
Sbjct: 241 LGGAIWLNAEMLSAYDFWQYWRNTEDADVERFLKLYTTLPLDEIAKLATLEGVEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+ATE+T M+HGR+ AE+AA  A + F+    S+++PT+ + K  ++ G+G+L L+V A 
Sbjct: 301 ILATEVTAMLHGRDAAEEAAETARKTFEDGELSENLPTVGVHKATLNGGIGVLALMVLAE 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
             T+  EARRH++  A++IN+  +S+ ++ +     +  G IKLS GKK H++  
Sbjct: 361 LCTTNGEARRHVEGGAVRINDEPVSDPRMMVDAGALNDQGVIKLSLGKKRHVLIR 415


>gi|110634136|ref|YP_674344.1| tyrosyl-tRNA synthetase [Mesorhizobium sp. BNC1]
 gi|110285120|gb|ABG63179.1| tyrosyl-tRNA synthetase [Chelativorans sp. BNC1]
          Length = 417

 Score =  537 bits (1384), Expect = e-150,   Method: Composition-based stats.
 Identities = 244/415 (58%), Positives = 313/415 (75%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           MP FKSDFL ILSERGFIHQIS+   LD L  +  VT YIGYD TA+SLH GHLTQ+M+L
Sbjct: 1   MPDFKSDFLRILSERGFIHQISDEAGLDELFLRETVTGYIGYDPTAASLHVGHLTQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            WLQ+TGH+PI+LMGGGT +IGDPSF+DE+R+++  + I +N+  +K  FS ++K+G G 
Sbjct: 61  HWLQQTGHRPIALMGGGTGMIGDPSFKDEARKLLTPEAIGQNLAGMKKSFSRYLKFGDGP 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           TDA+M NN  WL  + Y+  LR++G  FSVNRMLSFESV+ RL REQSLSFLEFNYMILQ
Sbjct: 121 TDAIMANNADWLLDLNYVTFLRDVGRHFSVNRMLSFESVKLRLDREQSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVEL + Y CRLQMGGSDQWGNI+ GIDLG R++   LFALTSPLLTTASG KMGK+
Sbjct: 181 AYDFVELQRRYGCRLQMGGSDQWGNIVNGIDLGRRMEDTTLFALTSPLLTTASGAKMGKS 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
            SGA+WL+  M SPY+FWQYWRN +DADV  F K  TTLP+ EIDR+ KL G EINEAKK
Sbjct: 241 ESGAVWLDPAMLSPYDFWQYWRNTEDADVGRFLKLYTTLPLDEIDRLEKLGGAEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+ATE+T M+HGR  AE+AA  A + F+    ++ +PTI + + ++  G+G+L  +V AG
Sbjct: 301 ILATEVTAMLHGRAAAEEAAETARKTFEEGALAESLPTIEVPRAQMEAGIGVLNAVVLAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            A +  E RR + +NAI++N+  I++++  I   D  + G +KLSFG+K H++  
Sbjct: 361 LAATNGEVRRAIANNAIRVNDETITDDRATIGAGDITAEGVVKLSFGRKKHVLLR 415


>gi|319404228|emb|CBI77821.1| Tyrosyl-tRNA synthetase [Bartonella rochalimae ATCC BAA-1498]
          Length = 417

 Score =  537 bits (1383), Expect = e-150,   Method: Composition-based stats.
 Identities = 249/415 (60%), Positives = 320/415 (77%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M AFKS+FL I+SERGFIHQIS+ + LD L  +  VTAYIG+D TASSLHAG L Q+M+L
Sbjct: 1   MYAFKSEFLRIISERGFIHQISDEKGLDDLFLKETVTAYIGFDPTASSLHAGSLLQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            W QKTGH+PI LMGGGT +IGDPSF+DE+RR++   +I +NI  IK IF+S++ +G  K
Sbjct: 61  HWFQKTGHRPIVLMGGGTGLIGDPSFKDEARRLLTHNDIAQNIMSIKKIFTSYLTFGDNK 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           TDA ++NN  WLC++ Y++ LR +G +FSVNRMLSF+SVR RL+RE SLSFLEFNYMILQ
Sbjct: 121 TDACIVNNAEWLCNLSYLEFLRNVGKYFSVNRMLSFDSVRLRLEREHSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVEL K Y  R+QMGGSDQWGNI+ GI+LG RL TP+L+ALTSPLLTT+SG KMGK+
Sbjct: 181 AYDFVELNKRYGLRVQMGGSDQWGNIVNGIELGHRLGTPQLYALTSPLLTTSSGAKMGKS 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           L+GAIWLN +M SPY FWQYWRN +D DV  F K  TTLPM+EI +++ L+G EINEAKK
Sbjct: 241 LNGAIWLNADMLSPYQFWQYWRNTEDLDVTRFLKLYTTLPMTEIAKLSALKGTEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+ATEIT M+HGR  A +A   A + F+     +++P+I I+  E+  G+GLLTL+V+AG
Sbjct: 301 ILATEITAMLHGRTLANEALETARKTFEEKTFGENLPSIKINATELKVGIGLLTLLVQAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            A S +EARR+++   I++N+ II NE   I  +D ++   IKLSFGKK H++  
Sbjct: 361 LAKSNSEARRYVQGGGIRVNDQIIENETHLIVEKDVNADEVIKLSFGKKKHVLVK 415


>gi|225627412|ref|ZP_03785449.1| tyrosyl-tRNA synthetase [Brucella ceti str. Cudo]
 gi|254706868|ref|ZP_05168696.1| tyrosyl-tRNA synthetase [Brucella pinnipedialis M163/99/10]
 gi|254710023|ref|ZP_05171834.1| tyrosyl-tRNA synthetase [Brucella pinnipedialis B2/94]
 gi|254714025|ref|ZP_05175836.1| tyrosyl-tRNA synthetase [Brucella ceti M644/93/1]
 gi|254716917|ref|ZP_05178728.1| tyrosyl-tRNA synthetase [Brucella ceti M13/05/1]
 gi|256031518|ref|ZP_05445132.1| tyrosyl-tRNA synthetase [Brucella pinnipedialis M292/94/1]
 gi|256159648|ref|ZP_05457405.1| tyrosyl-tRNA synthetase [Brucella ceti M490/95/1]
 gi|256254922|ref|ZP_05460458.1| tyrosyl-tRNA synthetase [Brucella ceti B1/94]
 gi|260168650|ref|ZP_05755461.1| tyrosyl-tRNA synthetase [Brucella sp. F5/99]
 gi|261218724|ref|ZP_05933005.1| tyrosyl-tRNA synthetase [Brucella ceti M13/05/1]
 gi|261222104|ref|ZP_05936385.1| tyrosyl-tRNA synthetase [Brucella ceti B1/94]
 gi|261314334|ref|ZP_05953531.1| tyrosyl-tRNA synthetase [Brucella pinnipedialis M163/99/10]
 gi|261317570|ref|ZP_05956767.1| tyrosyl-tRNA synthetase [Brucella pinnipedialis B2/94]
 gi|261321778|ref|ZP_05960975.1| tyrosyl-tRNA synthetase [Brucella ceti M644/93/1]
 gi|261758124|ref|ZP_06001833.1| tyrosyl-tRNA synthetase [Brucella sp. F5/99]
 gi|265988604|ref|ZP_06101161.1| tyrosyl-tRNA synthetase [Brucella pinnipedialis M292/94/1]
 gi|265998069|ref|ZP_06110626.1| tyrosyl-tRNA synthetase [Brucella ceti M490/95/1]
 gi|225617417|gb|EEH14462.1| tyrosyl-tRNA synthetase [Brucella ceti str. Cudo]
 gi|260920688|gb|EEX87341.1| tyrosyl-tRNA synthetase [Brucella ceti B1/94]
 gi|260923813|gb|EEX90381.1| tyrosyl-tRNA synthetase [Brucella ceti M13/05/1]
 gi|261294468|gb|EEX97964.1| tyrosyl-tRNA synthetase [Brucella ceti M644/93/1]
 gi|261296793|gb|EEY00290.1| tyrosyl-tRNA synthetase [Brucella pinnipedialis B2/94]
 gi|261303360|gb|EEY06857.1| tyrosyl-tRNA synthetase [Brucella pinnipedialis M163/99/10]
 gi|261738108|gb|EEY26104.1| tyrosyl-tRNA synthetase [Brucella sp. F5/99]
 gi|262552537|gb|EEZ08527.1| tyrosyl-tRNA synthetase [Brucella ceti M490/95/1]
 gi|264660801|gb|EEZ31062.1| tyrosyl-tRNA synthetase [Brucella pinnipedialis M292/94/1]
          Length = 417

 Score =  537 bits (1383), Expect = e-150,   Method: Composition-based stats.
 Identities = 243/415 (58%), Positives = 316/415 (76%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  FKSDFL  LSERGFIHQIS+   LD L ++  VTAYIG+D TA SLHAG L Q+M+L
Sbjct: 1   MSGFKSDFLRTLSERGFIHQISDESGLDELLAKETVTAYIGFDPTAPSLHAGGLIQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
           +WLQ+TGHKP++LMGGGT ++GDPSF+DE+R++M    I EN+  IK +F++++ +G G 
Sbjct: 61  YWLQQTGHKPVALMGGGTGMVGDPSFKDEARKLMTEDTIAENMASIKRVFANYLTFGDGA 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
            DALM+NN  WL +I Y++ LR++G  FSVNRMLSF+SV+ RL REQSLSFLEFNYMILQ
Sbjct: 121 NDALMVNNGEWLRNINYLEFLRDVGRHFSVNRMLSFDSVKLRLDREQSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVEL K Y  RLQMGGSDQWGNI+ GIDLG R+ TP+L+ALTSPLLTTASG KMGK+
Sbjct: 181 AYDFVELNKRYGLRLQMGGSDQWGNIVNGIDLGHRMGTPQLYALTSPLLTTASGQKMGKS 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           L GAIWLN +M S Y+FWQYWRN +DADV  F K  TTLP+ EI R+A+L G EINEAKK
Sbjct: 241 LGGAIWLNADMLSAYDFWQYWRNTEDADVERFLKLYTTLPLDEIARLAELDGAEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+ATE+T M+HGR+ AE+AA  A + F+    S+++PT+ + K  ++ G+G+L L+V A 
Sbjct: 301 ILATEVTAMLHGRDAAEEAAETARKTFEDGELSENLPTVGVHKATLNDGIGVLALMVLAE 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
             T+  EARRH++  A++IN+  +S+ ++ +     +  G IKLS GKK H++  
Sbjct: 361 LCTTNGEARRHVEGGAVRINDEPVSDPRMVVNAAALNDQGLIKLSLGKKRHVLIR 415


>gi|116252334|ref|YP_768172.1| tyrosyl-tRNA synthetase [Rhizobium leguminosarum bv. viciae 3841]
 gi|115256982|emb|CAK08076.1| putative tyrosyl-tRNA synthetase [Rhizobium leguminosarum bv.
           viciae 3841]
          Length = 418

 Score =  536 bits (1382), Expect = e-150,   Method: Composition-based stats.
 Identities = 249/415 (60%), Positives = 319/415 (76%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  FKSDFL  L ERGFIHQ+S+   LD L ++  VTAYIG+D TA SLHAG L Q+M+L
Sbjct: 1   MSEFKSDFLRTLKERGFIHQVSDESGLDDLFAKETVTAYIGFDPTAPSLHAGSLIQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            W+QKTGH+ ISLMGGGT ++GDPSF++E+R++M    I+ NI  IK +FS+++ YG G 
Sbjct: 61  HWMQKTGHRAISLMGGGTGMVGDPSFKEEARQLMTVDTIEGNIASIKRVFSNYLNYGDGP 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
            DALM+NN  WL S+ Y++ LR++G  FSVNRMLSF+SV++RL REQSLSFLEFNYMILQ
Sbjct: 121 KDALMINNAEWLRSLNYLEFLRDVGKHFSVNRMLSFDSVKTRLDREQSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVELAK YDCRLQMGGSDQWGNI+ GIDLG R+ TP+L+ALTSPLLTT+SG KMGK+
Sbjct: 181 AYDFVELAKRYDCRLQMGGSDQWGNIVNGIDLGHRMGTPQLYALTSPLLTTSSGAKMGKS 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
            +GA+WLN +M S Y+FWQYWRN +DADV  F K  TTLPM EI R+A L G EINE KK
Sbjct: 241 ATGAVWLNADMLSAYDFWQYWRNTEDADVSRFLKLYTTLPMDEIARLAALGGSEINEVKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+ATE+T ++HGRE AE+AA  A + F+    S+++P++ I   E+  G+GLL+LIV+AG
Sbjct: 301 ILATEVTAILHGREAAEQAAETARKTFEEGSLSENLPSVDIPATELDGGIGLLSLIVRAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            A+S  EARRH++  A++IN+  +S+E+  I   +  + G IKLS GKK HI+  
Sbjct: 361 LASSNGEARRHVQGGAVRINDEAVSDERKMIGSGEITADGVIKLSLGKKKHILIR 415


>gi|256061027|ref|ZP_05451183.1| tyrosyl-tRNA synthetase [Brucella neotomae 5K33]
 gi|261325026|ref|ZP_05964223.1| tyrosyl-tRNA synthetase [Brucella neotomae 5K33]
 gi|261301006|gb|EEY04503.1| tyrosyl-tRNA synthetase [Brucella neotomae 5K33]
          Length = 417

 Score =  536 bits (1382), Expect = e-150,   Method: Composition-based stats.
 Identities = 243/415 (58%), Positives = 316/415 (76%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  FKSDFL  LSERGFIHQIS+   LD L ++  VTAYIG+D TA SLHAG L Q+M+L
Sbjct: 1   MSGFKSDFLRTLSERGFIHQISDESGLDELLAKETVTAYIGFDPTAPSLHAGGLIQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
           +WLQ+TGHKP++LMGGGT ++GDPSF+DE+R++M    I EN+  IK +F++++ +G G 
Sbjct: 61  YWLQQTGHKPVALMGGGTGMVGDPSFKDEARKLMTEDTIAENMASIKRVFANYLTFGDGA 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
            DALM+NN  WL +I Y++ LR++G  FSVNRMLSF+SV+ RL REQSLSFLEFNYMILQ
Sbjct: 121 NDALMVNNGEWLRNINYLEFLRDVGRHFSVNRMLSFDSVKLRLDREQSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVEL K Y  RLQMGGSDQWGNI+ GIDLG R+ TP+L+ALTSPLLTTASG KMGK+
Sbjct: 181 AYDFVELNKRYGLRLQMGGSDQWGNIVNGIDLGHRMGTPQLYALTSPLLTTASGQKMGKS 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           L GAIWLN +M S Y+FWQYWRN +DADV  F K  TTLP+ EI R+A+L G EINEAKK
Sbjct: 241 LGGAIWLNADMLSAYDFWQYWRNTEDADVERFLKLYTTLPLDEIARLAELGGAEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+ATE+T M+HGR+ AE+AA  A + F+    S+++PT+ + K  ++ G+G+L L+V A 
Sbjct: 301 ILATEVTAMLHGRDAAEEAAETARKTFEDGGLSENLPTVGVHKATLNDGIGVLALMVLAE 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
             T+  EARRH++  A++IN+  +S+ ++ +     +  G IKLS GKK H++  
Sbjct: 361 LCTTNGEARRHVEGGAVRINDEPVSDPRMVVNAAALNDQGLIKLSLGKKRHVLIR 415


>gi|121602511|ref|YP_989096.1| tyrosyl-tRNA synthetase [Bartonella bacilliformis KC583]
 gi|120614688|gb|ABM45289.1| tyrosyl-tRNA synthetase [Bartonella bacilliformis KC583]
          Length = 417

 Score =  536 bits (1382), Expect = e-150,   Method: Composition-based stats.
 Identities = 244/415 (58%), Positives = 323/415 (77%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M AFKS+FL ++ ERGFIHQIS+ + LD L  + +VTAYIG+D T+SSLHAG L Q+M+L
Sbjct: 1   MFAFKSEFLHVMKERGFIHQISDEKGLDDLFLKEIVTAYIGFDPTSSSLHAGSLLQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
           +WLQKTGHKPI L+GGGT +IGDPSF++ESR ++   +I +NI  IK +F++++ +G  K
Sbjct: 61  YWLQKTGHKPIVLIGGGTGMIGDPSFKEESRILLTQDDIAKNIVGIKKVFANYLTFGDKK 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           TDA ++NN  WLC+I Y++ LR++G  FSVNRMLSF+SVR RL+RE SLSFLEFNYMILQ
Sbjct: 121 TDAGIVNNAEWLCNINYLEFLRDVGKHFSVNRMLSFDSVRLRLEREHSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           +YDFVEL K Y  R+QMGGSDQWGNI+ GI+LG RL TP+L+ALTSPLLTT+SG KMGK+
Sbjct: 181 SYDFVELNKRYGLRVQMGGSDQWGNIVNGIELGHRLGTPQLYALTSPLLTTSSGVKMGKS 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           LSGAIWLN +M SPY FWQYWRN +DADV  F K  TTLPM+EI +++ LQG EINEAKK
Sbjct: 241 LSGAIWLNADMLSPYQFWQYWRNTEDADVTRFLKLYTTLPMNEIAKLSALQGTEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+ATEIT M+HG   A +AA  A + F+      ++P I I+  E+ +G GLL+L+V+AG
Sbjct: 301 ILATEITAMLHGYTVANEAAETARKTFEEKTLGDNLPAIKINAIELKKGAGLLSLLVQAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            A S +EARRH++   +++N+ I+++E   I  +D ++T ++K+SFGKK HI+  
Sbjct: 361 LAKSNSEARRHIQGGGVRVNDQIVTDETRLISEEDINATESVKISFGKKKHILIK 415


>gi|17987330|ref|NP_539964.1| tyrosyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
 gi|62289867|ref|YP_221660.1| tyrosyl-tRNA synthetase [Brucella abortus bv. 1 str. 9-941]
 gi|82699794|ref|YP_414368.1| tyrosyl-tRNA synthetase [Brucella melitensis biovar Abortus 2308]
 gi|148560522|ref|YP_001258899.1| tyrosyl-tRNA synthetase [Brucella ovis ATCC 25840]
 gi|189024109|ref|YP_001934877.1| tyrosyl-tRNA synthetase [Brucella abortus S19]
 gi|237815361|ref|ZP_04594359.1| tyrosyl-tRNA synthetase [Brucella abortus str. 2308 A]
 gi|254689170|ref|ZP_05152424.1| tyrosyl-tRNA synthetase [Brucella abortus bv. 6 str. 870]
 gi|254697305|ref|ZP_05159133.1| tyrosyl-tRNA synthetase [Brucella abortus bv. 2 str. 86/8/59]
 gi|254730203|ref|ZP_05188781.1| tyrosyl-tRNA synthetase [Brucella abortus bv. 4 str. 292]
 gi|256044594|ref|ZP_05447498.1| tyrosyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1]
 gi|256369352|ref|YP_003106860.1| tyrosyl-tRNA synthetase [Brucella microti CCM 4915]
 gi|260545389|ref|ZP_05821130.1| tyrosyl-tRNA synthetase [Brucella abortus NCTC 8038]
 gi|260563946|ref|ZP_05834432.1| tyrosyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
 gi|260754669|ref|ZP_05867017.1| tyrosyl-tRNA synthetase [Brucella abortus bv. 6 str. 870]
 gi|260757892|ref|ZP_05870240.1| tyrosyl-tRNA synthetase [Brucella abortus bv. 4 str. 292]
 gi|260761715|ref|ZP_05874058.1| tyrosyl-tRNA synthetase [Brucella abortus bv. 2 str. 86/8/59]
 gi|265991018|ref|ZP_06103575.1| tyrosyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1]
 gi|294852280|ref|ZP_06792953.1| tyrosyl-tRNA synthetase [Brucella sp. NVSL 07-0026]
 gi|306840439|ref|ZP_07473199.1| tyrosyl-tRNA synthetase [Brucella sp. BO2]
 gi|306843821|ref|ZP_07476419.1| tyrosyl-tRNA synthetase [Brucella sp. BO1]
 gi|75496888|sp|Q57DI5|SYY_BRUAB RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|81851813|sp|Q8YGV8|SYY_BRUME RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|97197584|sp|Q2YNR0|SYY_BRUA2 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|17983012|gb|AAL52228.1| tyrosyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
 gi|62195999|gb|AAX74299.1| TyrS, tyrosyl-tRNA synthetase [Brucella abortus bv. 1 str. 9-941]
 gi|82615895|emb|CAJ10899.1| Aminoacyl-tRNA synthetase, class I:Aminoacyl-tRNA synthetase, class
           Ib:Tyrosyl-tRNA synthetase, class Ib:RNA-binding S4
           [Brucella melitensis biovar Abortus 2308]
 gi|148371779|gb|ABQ61758.1| tyrosyl-tRNA synthetase [Brucella ovis ATCC 25840]
 gi|189019681|gb|ACD72403.1| tyrosyl-tRNA synthetase [Brucella abortus S19]
 gi|237790198|gb|EEP64408.1| tyrosyl-tRNA synthetase [Brucella abortus str. 2308 A]
 gi|255999512|gb|ACU47911.1| tyrosyl-tRNA synthetase [Brucella microti CCM 4915]
 gi|260096796|gb|EEW80671.1| tyrosyl-tRNA synthetase [Brucella abortus NCTC 8038]
 gi|260153962|gb|EEW89054.1| tyrosyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
 gi|260668210|gb|EEX55150.1| tyrosyl-tRNA synthetase [Brucella abortus bv. 4 str. 292]
 gi|260672147|gb|EEX58968.1| tyrosyl-tRNA synthetase [Brucella abortus bv. 2 str. 86/8/59]
 gi|260674777|gb|EEX61598.1| tyrosyl-tRNA synthetase [Brucella abortus bv. 6 str. 870]
 gi|263001802|gb|EEZ14377.1| tyrosyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1]
 gi|294820869|gb|EFG37868.1| tyrosyl-tRNA synthetase [Brucella sp. NVSL 07-0026]
 gi|306275899|gb|EFM57615.1| tyrosyl-tRNA synthetase [Brucella sp. BO1]
 gi|306289573|gb|EFM60788.1| tyrosyl-tRNA synthetase [Brucella sp. BO2]
          Length = 417

 Score =  536 bits (1382), Expect = e-150,   Method: Composition-based stats.
 Identities = 243/415 (58%), Positives = 316/415 (76%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  FKSDFL  LSERGFIHQIS+   LD L ++  VTAYIG+D TA SLHAG L Q+M+L
Sbjct: 1   MSGFKSDFLRTLSERGFIHQISDESGLDELLAKETVTAYIGFDPTAPSLHAGGLIQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
           +WLQ+TGHKP++LMGGGT ++GDPSF+DE+R++M    I EN+  IK +F++++ +G G 
Sbjct: 61  YWLQQTGHKPVALMGGGTGMVGDPSFKDEARKLMTEDTIAENMASIKRVFANYLTFGDGA 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
            DALM+NN  WL +I Y++ LR++G  FSVNRMLSF+SV+ RL REQSLSFLEFNYMILQ
Sbjct: 121 NDALMVNNGEWLRNINYLEFLRDVGRHFSVNRMLSFDSVKLRLDREQSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVEL K Y  RLQMGGSDQWGNI+ GIDLG R+ TP+L+ALTSPLLTTASG KMGK+
Sbjct: 181 AYDFVELNKRYGLRLQMGGSDQWGNIVNGIDLGHRMGTPQLYALTSPLLTTASGQKMGKS 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           L GAIWLN +M S Y+FWQYWRN +DADV  F K  TTLP+ EI R+A+L G EINEAKK
Sbjct: 241 LGGAIWLNADMLSAYDFWQYWRNTEDADVERFLKLYTTLPLDEIARLAELGGAEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+ATE+T M+HGR+ AE+AA  A + F+    S+++PT+ + K  ++ G+G+L L+V A 
Sbjct: 301 ILATEVTAMLHGRDAAEEAAETARKTFEDGELSENLPTVGVHKATLNDGIGVLALMVLAE 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
             T+  EARRH++  A++IN+  +S+ ++ +     +  G IKLS GKK H++  
Sbjct: 361 LCTTNGEARRHVEGGAVRINDEPVSDPRMVVNAAALNDQGLIKLSLGKKRHVLIR 415


>gi|254719024|ref|ZP_05180835.1| tyrosyl-tRNA synthetase [Brucella sp. 83/13]
 gi|265984014|ref|ZP_06096749.1| tyrosyl-tRNA synthetase [Brucella sp. 83/13]
 gi|306840088|ref|ZP_07472874.1| tyrosyl-tRNA synthetase [Brucella sp. NF 2653]
 gi|264662606|gb|EEZ32867.1| tyrosyl-tRNA synthetase [Brucella sp. 83/13]
 gi|306404816|gb|EFM61109.1| tyrosyl-tRNA synthetase [Brucella sp. NF 2653]
          Length = 417

 Score =  536 bits (1381), Expect = e-150,   Method: Composition-based stats.
 Identities = 243/415 (58%), Positives = 316/415 (76%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  FKSDFL  LSERGFIHQIS+   LD L ++  VTAYIG+D TA SLHAG L Q+M+L
Sbjct: 1   MSGFKSDFLRTLSERGFIHQISDESGLDKLLAKETVTAYIGFDPTAPSLHAGGLIQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
           +WLQ+TGHKP++LMGGGT ++GDPSF+DE+R++M    I EN+  IK +F++++ +G G 
Sbjct: 61  YWLQQTGHKPVALMGGGTGMVGDPSFKDEARKLMTEDTIAENMASIKRVFANYLTFGDGA 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
            DALM+NN  WL +I Y++ LR++G  FSVNRMLSF+SV+ RL REQSLSFLEFNYMILQ
Sbjct: 121 NDALMVNNGEWLRNINYLEFLRDVGRHFSVNRMLSFDSVKLRLDREQSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVEL K Y  RLQMGGSDQWGNI+ GIDLG R+ TP+L+ALTSPLLTTASG KMGK+
Sbjct: 181 AYDFVELNKRYGLRLQMGGSDQWGNIVNGIDLGHRMGTPQLYALTSPLLTTASGQKMGKS 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           L GAIWLN +M S Y+FWQYWRN +DADV  F K  TTLP+ EI R+A+L G EINEAKK
Sbjct: 241 LGGAIWLNADMLSAYDFWQYWRNTEDADVERFLKLYTTLPLDEIARLAELGGAEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+ATE+T M+HGR+ AE+AA  A + F+    S+++PT+ + K  ++ G+G+L L+V A 
Sbjct: 301 ILATEVTAMLHGRDAAEEAAETARKTFEDGELSENLPTVGVHKATLNDGIGVLALMVLAE 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
             T+  EARRH++  A++IN+  +S+ ++ +     +  G IKLS GKK H++  
Sbjct: 361 LCTTNGEARRHVEGGAVRINDEPVSDPRMVVNAAALNDQGLIKLSLGKKRHVLIR 415


>gi|23501810|ref|NP_697937.1| tyrosyl-tRNA synthetase [Brucella suis 1330]
 gi|161618882|ref|YP_001592769.1| tyrosyl-tRNA synthetase [Brucella canis ATCC 23365]
 gi|254701686|ref|ZP_05163514.1| tyrosyl-tRNA synthetase [Brucella suis bv. 5 str. 513]
 gi|254704230|ref|ZP_05166058.1| tyrosyl-tRNA synthetase [Brucella suis bv. 3 str. 686]
 gi|260566523|ref|ZP_05836993.1| tyrosyl-tRNA synthetase [Brucella suis bv. 4 str. 40]
 gi|261752237|ref|ZP_05995946.1| tyrosyl-tRNA synthetase [Brucella suis bv. 5 str. 513]
 gi|261754896|ref|ZP_05998605.1| tyrosyl-tRNA synthetase [Brucella suis bv. 3 str. 686]
 gi|81752714|sp|Q8G105|SYY_BRUSU RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|23347743|gb|AAN29852.1| tyrosyl-tRNA synthetase [Brucella suis 1330]
 gi|161335693|gb|ABX61998.1| Tyrosyl-tRNA synthetase [Brucella canis ATCC 23365]
 gi|260156041|gb|EEW91121.1| tyrosyl-tRNA synthetase [Brucella suis bv. 4 str. 40]
 gi|261741990|gb|EEY29916.1| tyrosyl-tRNA synthetase [Brucella suis bv. 5 str. 513]
 gi|261744649|gb|EEY32575.1| tyrosyl-tRNA synthetase [Brucella suis bv. 3 str. 686]
          Length = 417

 Score =  536 bits (1381), Expect = e-150,   Method: Composition-based stats.
 Identities = 243/415 (58%), Positives = 316/415 (76%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  FKSDFL  LSERGFIHQIS+   LD L ++  VTAYIG+D TA SLHAG L Q+M+L
Sbjct: 1   MSGFKSDFLRTLSERGFIHQISDESGLDELLAKETVTAYIGFDPTAPSLHAGGLIQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
           +WLQ+TGHKP++LMGGGT ++GDPSF+DE+R++M    I EN+  IK +F++++ +G G 
Sbjct: 61  YWLQQTGHKPVALMGGGTGMVGDPSFKDEARKLMTEDTIAENMASIKRVFANYLTFGDGA 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
            DALM+NN  WL +I Y++ LR++G  FSVNRMLSF+SV+ RL REQSLSFLEFNYMILQ
Sbjct: 121 NDALMVNNGEWLRNINYLEFLRDVGRHFSVNRMLSFDSVKLRLDREQSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVEL K Y  RLQMGGSDQWGNI+ GIDLG R+ TP+L+ALTSPLLTTASG KMGK+
Sbjct: 181 AYDFVELNKRYGLRLQMGGSDQWGNIVNGIDLGHRMGTPQLYALTSPLLTTASGQKMGKS 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           L GAIWLN +M S Y+FWQYWRN +DADV  F K  TTLP+ EI R+A+L G EINEAKK
Sbjct: 241 LGGAIWLNADMLSAYDFWQYWRNTEDADVERFLKLYTTLPLDEIARLAELGGAEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+ATE+T M+HGR+ AE+AA  A + F+    S+++PT+ + K  ++ G+G+L L+V A 
Sbjct: 301 ILATEVTAMLHGRDAAEEAAETARKTFEDGELSENLPTVGVHKATLNDGIGVLALMVLAE 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
             T+  EARRH++  A++IN+  +S+ ++ +     +  G IKLS GKK H++  
Sbjct: 361 LCTTNGEARRHVEGGAVRINDEPVSDPRMVVNAAALNGQGLIKLSLGKKRHVLIR 415


>gi|256257420|ref|ZP_05462956.1| tyrosyl-tRNA synthetase [Brucella abortus bv. 9 str. C68]
 gi|260883695|ref|ZP_05895309.1| tyrosyl-tRNA synthetase [Brucella abortus bv. 9 str. C68]
 gi|297248269|ref|ZP_06931987.1| tyrosyl-tRNA synthetase [Brucella abortus bv. 5 str. B3196]
 gi|260873223|gb|EEX80292.1| tyrosyl-tRNA synthetase [Brucella abortus bv. 9 str. C68]
 gi|297175438|gb|EFH34785.1| tyrosyl-tRNA synthetase [Brucella abortus bv. 5 str. B3196]
          Length = 417

 Score =  536 bits (1381), Expect = e-150,   Method: Composition-based stats.
 Identities = 242/415 (58%), Positives = 316/415 (76%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  FKSDFL  LSERGFIHQIS+   LD L ++  VTAYIG+D TA SLHAG L Q+M+L
Sbjct: 1   MSGFKSDFLRTLSERGFIHQISDESGLDELLAKETVTAYIGFDPTAPSLHAGGLIQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
           +WLQ+TGHKP++LMGGGT ++GDPSF+DE+R++M    I EN+  IK +F++++ +G G 
Sbjct: 61  YWLQQTGHKPVALMGGGTGMVGDPSFKDEARKLMTEDTIAENMASIKRVFANYLTFGDGA 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
            DALM+NN  WL +I Y++ LR++G  FSVNRMLSF+SV+ RL REQSLSFLEFNYMILQ
Sbjct: 121 NDALMVNNGEWLRNINYLEFLRDVGRHFSVNRMLSFDSVKLRLDREQSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVEL K Y  RLQMGGSDQWGNI+ GIDLG R+ TP+L+ALTSPLLTTASG KMGK+
Sbjct: 181 AYDFVELNKRYGLRLQMGGSDQWGNIVNGIDLGHRMGTPQLYALTSPLLTTASGQKMGKS 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           L GAIWLN +M S Y+FWQYWRN +DADV  F K  TTLP+ EI R+A+L G EINEAKK
Sbjct: 241 LGGAIWLNADMLSAYDFWQYWRNTEDADVERFLKLYTTLPLDEIARLAELGGAEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+ATE+T M+HGR+ AE+AA  A + F+    S+++PT+ + K  ++ G+G+L L+V A 
Sbjct: 301 ILATEVTAMLHGRDAAEEAAETARKTFEDGELSENLPTVGVHKATLNDGIGVLALMVLAE 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
             T+  EARRH++  A+++N+  +S+ ++ +     +  G IKLS GKK H++  
Sbjct: 361 LCTTNGEARRHVEGGAVRVNDEPVSDPRMVVNAAALNDQGLIKLSLGKKRHVLIR 415


>gi|240850610|ref|YP_002972010.1| tyrosyl-tRNA synthetase [Bartonella grahamii as4aup]
 gi|240267733|gb|ACS51321.1| tyrosyl-tRNA synthetase [Bartonella grahamii as4aup]
          Length = 417

 Score =  536 bits (1381), Expect = e-150,   Method: Composition-based stats.
 Identities = 248/415 (59%), Positives = 322/415 (77%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M AFKSDFL I+SERGFIHQIS+ + LD L S+  ++AY G+D TASSLHAG L Q+M+L
Sbjct: 1   MFAFKSDFLHIMSERGFIHQISDEKGLDDLFSKETISAYTGFDPTASSLHAGSLLQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
           +WLQKTGH+PI+LMGGGT +IGDPSF+DE+RR++   +I  NI+ IK +F++++ +G  +
Sbjct: 61  YWLQKTGHRPIALMGGGTGLIGDPSFKDEARRLLTQDDIAANIDGIKKVFANYLTFGDQE 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           TDA ++NN  WLC++ Y++ LR++G  FSVNRMLSF+SVR RL+RE SLSFLEFNYMILQ
Sbjct: 121 TDACIVNNAEWLCNLNYLEFLRDVGKHFSVNRMLSFDSVRLRLEREHSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVEL K Y  R+QMGGSDQWGNII GI+LG RL TP+L+ALTSPLLTT+SG KMGK+
Sbjct: 181 AYDFVELYKRYGLRMQMGGSDQWGNIINGIELGHRLGTPQLYALTSPLLTTSSGAKMGKS 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           L+GAIWLN +M SPY FWQYWRNI+DADV  F K  T LPM EI +++ LQG EINEAKK
Sbjct: 241 LNGAIWLNADMLSPYQFWQYWRNIEDADVTRFLKLYTPLPMDEILKLSVLQGTEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+ATE+T M+HGR  A  AA  A + F+     +++PT+  +  E+ +G+GLLTL+V+AG
Sbjct: 301 ILATEVTAMLHGRALANAAAETARKTFEEKTLGENLPTVETNASELKKGVGLLTLLVQAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            A S +EARRH++   +++N+ II +E   I   D  + G IKLSFGKK H++  
Sbjct: 361 LAKSNSEARRHVQGGGVRVNDQIIEDETHLIIEGDVSAEGIIKLSFGKKKHVVIK 415


>gi|154248394|ref|YP_001419352.1| tyrosyl-tRNA synthetase [Xanthobacter autotrophicus Py2]
 gi|254765190|sp|A7INU9|SYY_XANP2 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|154162479|gb|ABS69695.1| tyrosyl-tRNA synthetase [Xanthobacter autotrophicus Py2]
          Length = 416

 Score =  535 bits (1379), Expect = e-150,   Method: Composition-based stats.
 Identities = 217/413 (52%), Positives = 293/413 (70%), Gaps = 3/413 (0%)

Query: 3   AFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
            F+SDFL  L ERG+IHQ S+   LD   ++G +TAYIG+D TASSLHAGHL  +M+L  
Sbjct: 5   TFRSDFLRTLHERGYIHQCSDLERLDAKAAEGPITAYIGFDATASSLHAGHLLSIMMLRT 64

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD 122
           LQ+TGH PI+LMGGGT+ IGDPS +DE+R+M+  Q+I++NI  I+ +F+ F+ +G G   
Sbjct: 65  LQRTGHNPIALMGGGTTKIGDPSGKDEARKMLTDQQIEDNIASIRKVFARFLDFGAG--- 121

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
           A M NN +WL  +KYI LLRE+G  F++NRML+F+SV+ RL+REQ L+FLEFNYMILQAY
Sbjct: 122 AKMENNASWLDELKYIPLLREVGPHFTINRMLTFDSVKLRLEREQPLTFLEFNYMILQAY 181

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DFVEL   + C LQMGGSDQWGNI+ G++LG R++   LFALT+PLLTT+SG KMGKT  
Sbjct: 182 DFVELNARHGCILQMGGSDQWGNIVNGMELGRRMRGADLFALTTPLLTTSSGAKMGKTAG 241

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKII 302
           GA+WL+ ++ SPY +WQYWRN  DADV  F K  T LP+ EI R+A L+G+EIN AK+++
Sbjct: 242 GAVWLDADLLSPYEYWQYWRNAGDADVERFLKLFTELPLDEIARLAALEGQEINHAKEVL 301

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFA 362
           ATE T ++HGRE AEKA   +   F     +  +PT+ + +  +  G+ +    V AG  
Sbjct: 302 ATEATALLHGREAAEKAKETSRATFADGALAVDLPTVEVPRATLEAGLPVAKAFVDAGLV 361

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            ST+EARR +K   +K+N+  +++EK  I L      G +KLS GKK H++  
Sbjct: 362 ASTSEARRQIKGGGLKVNDVTVTDEKAVIDLGALTPEGVVKLSLGKKKHVLLK 414


>gi|225852437|ref|YP_002732670.1| tyrosyl-tRNA synthetase [Brucella melitensis ATCC 23457]
 gi|256264069|ref|ZP_05466601.1| tyrosyl-tRNA synthetase [Brucella melitensis bv. 2 str. 63/9]
 gi|225640802|gb|ACO00716.1| tyrosyl-tRNA synthetase [Brucella melitensis ATCC 23457]
 gi|263094264|gb|EEZ18134.1| tyrosyl-tRNA synthetase [Brucella melitensis bv. 2 str. 63/9]
 gi|326408951|gb|ADZ66016.1| tyrosyl-tRNA synthetase [Brucella melitensis M28]
 gi|326538665|gb|ADZ86880.1| tyrosyl-tRNA synthetase [Brucella melitensis M5-90]
          Length = 417

 Score =  535 bits (1378), Expect = e-150,   Method: Composition-based stats.
 Identities = 243/415 (58%), Positives = 316/415 (76%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  FKSDFL  LSERGFIHQIS+   LD L ++  VTAYIG+D TA SLHAG L Q+M+L
Sbjct: 1   MSGFKSDFLRTLSERGFIHQISDESGLDELLAKETVTAYIGFDPTAPSLHAGGLIQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
           +WLQ+TGHKP++LMGGGT ++GDPSF+DE+R++M    I EN+  IK +F++++ +G G 
Sbjct: 61  YWLQQTGHKPVALMGGGTGMVGDPSFKDEARKLMTEDTIAENMASIKRVFANYLTFGDGA 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
            DALM+NN  WL +I Y++ LR++G  FSVNRMLSF+SV+ RL REQSLSFLEFNYMILQ
Sbjct: 121 NDALMVNNGEWLRNINYLEFLRDVGRHFSVNRMLSFDSVKLRLDREQSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVEL K Y  RLQMGGSDQWGNI+ GIDLG R+ TP+L+ALTSPLLTTASG KMGK+
Sbjct: 181 AYDFVELNKRYGLRLQMGGSDQWGNIVNGIDLGHRMGTPQLYALTSPLLTTASGQKMGKS 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           L GAIWLN +M S Y+FWQYWRN +DADV  F K  TTLP+ EI R+A+L G EINEAKK
Sbjct: 241 LGGAIWLNADMLSAYDFWQYWRNAEDADVERFLKLYTTLPLDEIARLAELGGAEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+ATE+T M+HGR+ AE+AA  A + F+    S+++PT+ + K  ++ G+G+L L+V A 
Sbjct: 301 ILATEVTAMLHGRDAAEEAAETARKTFEDGELSENLPTVGVHKATLNDGIGVLALMVLAE 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
             T+  EARRH++  A++IN+  +S+ ++ +     +  G IKLS GKK H++  
Sbjct: 361 LCTTNGEARRHVEGGAVRINDEPVSDPRMVVNAAALNDQGLIKLSLGKKRHVLIR 415


>gi|190891958|ref|YP_001978500.1| tyrosyl-tRNA synthetase [Rhizobium etli CIAT 652]
 gi|190697237|gb|ACE91322.1| tyrosyl-tRNA synthetase protein [Rhizobium etli CIAT 652]
 gi|327191064|gb|EGE58117.1| tyrosyl-tRNA synthetase protein [Rhizobium etli CNPAF512]
          Length = 418

 Score =  535 bits (1378), Expect = e-150,   Method: Composition-based stats.
 Identities = 246/415 (59%), Positives = 317/415 (76%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  FKS+FL  L ERGFIHQIS+ R LD L ++  VTAYIGYD TASSLH GHLTQ+M+L
Sbjct: 1   MSEFKSEFLRTLKERGFIHQISDERGLDDLFAKETVTAYIGYDPTASSLHVGHLTQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            WLQ TGH+PISLMGGGT ++GDPSF++E+R++M  + I++NI  IK  FS+++ Y    
Sbjct: 61  HWLQATGHRPISLMGGGTGMVGDPSFKEEARKLMTIETIEQNIASIKRCFSNYLDYDKSG 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
             ALM+NN  WL S+ Y++ LR++G  FSVNRMLSF+SV++RL REQSLSFLEFNYMILQ
Sbjct: 121 NAALMINNAEWLRSLNYLEFLRDVGRHFSVNRMLSFDSVKTRLDREQSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVELAK YDCRLQMGGSDQWGNI+ GIDLG R+ TP+L+ALTSPLLTT+SG KMGK+
Sbjct: 181 AYDFVELAKRYDCRLQMGGSDQWGNIVNGIDLGHRMGTPQLYALTSPLLTTSSGAKMGKS 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
            SGA+WLN ++   Y+FWQYWRN +DADV  F K  TTLPM EI R++ L G E+NE KK
Sbjct: 241 ASGAVWLNADLLPVYDFWQYWRNTEDADVPRFLKLFTTLPMDEIARLSALGGSELNEVKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+ATE+T ++HGR  AE+AA  A + F+    S+++P++ I   E+  G+GLL+L+V+AG
Sbjct: 301 ILATEVTAILHGRAAAEQAAETARKTFEEGGLSENLPSVDIPGTELDGGIGLLSLMVRAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            A S  EARRH++  A++IN+  +S+E+  I   +  + G IKLS GKK HI+  
Sbjct: 361 LAGSNGEARRHVQGGAVRINDEAVSDERRLIGSDEITADGVIKLSLGKKKHILIR 415


>gi|256113474|ref|ZP_05454308.1| tyrosyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether]
 gi|265994855|ref|ZP_06107412.1| tyrosyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether]
 gi|262765968|gb|EEZ11757.1| tyrosyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether]
          Length = 417

 Score =  534 bits (1377), Expect = e-150,   Method: Composition-based stats.
 Identities = 242/415 (58%), Positives = 315/415 (75%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  FKSDFL  LSERGFIHQIS+   LD L ++  VTAYIG+D TA SLHAG L Q+M+L
Sbjct: 1   MSGFKSDFLRTLSERGFIHQISDESGLDELLAKETVTAYIGFDPTAPSLHAGGLIQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
           +WLQ+TGHKP++LMGGGT ++GDPSF+DE+R++M    I EN+  IK +F++++ +G G 
Sbjct: 61  YWLQQTGHKPVALMGGGTGMVGDPSFKDEARKLMTEDTIAENMASIKRVFANYLTFGDGA 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
            DALM+NN  WL +I Y++ LR++G  FSVNRMLSF+SV+ RL REQSLSFLEFNYMILQ
Sbjct: 121 NDALMVNNGEWLRNINYLEFLRDVGRHFSVNRMLSFDSVKLRLDREQSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVEL K Y  RLQMGGSDQWGNI+ GIDLG R+ T +L+ALTSPLLTTASG KMGK+
Sbjct: 181 AYDFVELNKRYGLRLQMGGSDQWGNIVNGIDLGHRMGTQQLYALTSPLLTTASGQKMGKS 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           L GAIWLN +M S Y+FWQYWRN +DADV  F K  TTLP+ EI R+A+L G EINEAKK
Sbjct: 241 LGGAIWLNADMLSAYDFWQYWRNTEDADVERFLKLYTTLPLDEIARLAELGGAEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+ATE+T M+HGR+ AE+AA  A + F+    S+++PT+ + K  ++ G+G+L L+V A 
Sbjct: 301 ILATEVTAMLHGRDAAEEAAETARKTFEDGELSENLPTVGVHKATLNDGIGVLALMVLAE 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
             T+  EARRH++  A++IN+  +S+ ++ +     +  G IKLS GKK H++  
Sbjct: 361 LCTTNGEARRHVEGGAVRINDEPVSDPRMVVNAAALNDQGLIKLSLGKKRHVLIR 415


>gi|163843195|ref|YP_001627599.1| tyrosyl-tRNA synthetase [Brucella suis ATCC 23445]
 gi|163673918|gb|ABY38029.1| tyrosyl-tRNA synthetase [Brucella suis ATCC 23445]
          Length = 417

 Score =  534 bits (1377), Expect = e-150,   Method: Composition-based stats.
 Identities = 243/415 (58%), Positives = 316/415 (76%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  FKSDFL  LSERGFIHQIS+   LD L ++  VTAYIG+D TA SLHAG L Q+M+L
Sbjct: 1   MSGFKSDFLRTLSERGFIHQISDESGLDELLAKETVTAYIGFDPTAPSLHAGGLIQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
           +WLQ+TGHKP++LMGGGT ++GDPSF+DE+R++M    I EN+  IK +F++++ +G G 
Sbjct: 61  YWLQQTGHKPVALMGGGTGMVGDPSFKDEARKLMTEDTIAENMASIKRVFANYLTFGDGA 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
            DALM+NN  WL +I Y++ LR++G  FSVNRMLSF+SV+ RL REQSLSFLEFNYMILQ
Sbjct: 121 NDALMVNNGGWLRNINYLEFLRDVGRHFSVNRMLSFDSVKLRLDREQSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVEL K Y  RLQMGGSDQWGNI+ GIDLG R+ TP+L+ALTSPLLTTASG KMGK+
Sbjct: 181 AYDFVELNKRYGLRLQMGGSDQWGNIVNGIDLGHRMGTPQLYALTSPLLTTASGQKMGKS 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           L GAIWLN +M S Y+FWQYWRN +DADV  F K  TTLP+ EI R+A+L G EINEAKK
Sbjct: 241 LGGAIWLNADMLSAYDFWQYWRNTEDADVERFLKLYTTLPLDEIARLAELGGAEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+ATE+T M+HGR+ AE+AA  A + F+    S+++PT+ + K  ++ G+G+L L+V A 
Sbjct: 301 ILATEVTAMLHGRDAAEEAAETARKTFEDGELSENLPTVGVHKATLNDGIGVLALMVLAE 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
             T+  EARRH++  A++IN+  +S+ ++ +     +  G IKLS GKK H++  
Sbjct: 361 LCTTNGEARRHVEGGAVRINDEPVSDPRMVVNAAALNGQGLIKLSLGKKRHVLIR 415


>gi|159184939|ref|NP_354812.2| tyrosyl-tRNA synthetase [Agrobacterium tumefaciens str. C58]
 gi|81493394|sp|Q8UED2|SYY_AGRT5 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|159140217|gb|AAK87597.2| tyrosyl-tRNA synthetase [Agrobacterium tumefaciens str. C58]
          Length = 417

 Score =  534 bits (1376), Expect = e-149,   Method: Composition-based stats.
 Identities = 245/415 (59%), Positives = 317/415 (76%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  FKSDFL  L ERGFIHQIS+   LD L ++  VTAYIGYD TASSLH GHLTQ+M+L
Sbjct: 1   MSRFKSDFLRTLDERGFIHQISDEAGLDELFAKETVTAYIGYDPTASSLHVGHLTQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            W+QKTGH+PISLMGGGT ++GDPSF++E+R++M    I++NI  +K +F++++ Y   +
Sbjct: 61  HWMQKTGHQPISLMGGGTGMVGDPSFKEEARKLMTIDMIEDNITSLKHVFANYLDYDRAE 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
             ALM+NN  WL  + Y++ LR++G  FSVNRMLSF+SV++RL REQSLSFLEFNYMILQ
Sbjct: 121 NPALMINNADWLRGLNYLEFLRDVGRHFSVNRMLSFDSVKTRLDREQSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVEL +   CRLQMGGSDQWGNII GIDLG R+ TP+L+ALTSPLLTT+SG KMGK+
Sbjct: 181 AYDFVELNQRTGCRLQMGGSDQWGNIINGIDLGHRMGTPQLYALTSPLLTTSSGAKMGKS 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
            SGA+WLNK++   Y+FWQYWRN +DADVV FAK  TTLPM EI R+A L G EINEAKK
Sbjct: 241 ASGAVWLNKDLLPVYDFWQYWRNTEDADVVRFAKLFTTLPMDEIARIATLGGSEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+ATE+T ++HGR  AE+AA  A + F+    ++++P+I +   E+  G+G+L+LIV+AG
Sbjct: 301 ILATEVTAILHGRAAAEEAAETARKTFEEGALAENLPSIEVPTSELDAGVGVLSLIVRAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            A+S  EARRH++  A+KIN   +S+E+  I   +    G IKLS GKK H++  
Sbjct: 361 LASSNGEARRHVQGGAVKINEQGVSDERQIIGTGEVTGDGVIKLSVGKKKHVLVR 415


>gi|125973241|ref|YP_001037151.1| tyrosyl-tRNA synthetase [Clostridium thermocellum ATCC 27405]
 gi|256003719|ref|ZP_05428707.1| tyrosyl-tRNA synthetase [Clostridium thermocellum DSM 2360]
 gi|281417441|ref|ZP_06248461.1| tyrosyl-tRNA synthetase [Clostridium thermocellum JW20]
 gi|254783592|sp|A3DDC9|SYY_CLOTH RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|125713466|gb|ABN51958.1| tyrosyl-tRNA synthetase [Clostridium thermocellum ATCC 27405]
 gi|255992280|gb|EEU02374.1| tyrosyl-tRNA synthetase [Clostridium thermocellum DSM 2360]
 gi|281408843|gb|EFB39101.1| tyrosyl-tRNA synthetase [Clostridium thermocellum JW20]
 gi|316940528|gb|ADU74562.1| tyrosyl-tRNA synthetase [Clostridium thermocellum DSM 1313]
          Length = 408

 Score =  534 bits (1375), Expect = e-149,   Method: Composition-based stats.
 Identities = 180/412 (43%), Positives = 265/412 (64%), Gaps = 5/412 (1%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S     L ERG+I Q+++  ++  L  +  +T YIG+D TA SLH GH  Q+M++  +QK
Sbjct: 2   SSVFETLKERGYIAQLTHEEKIKELLEKEKITFYIGFDPTADSLHVGHFLQMMVMAHMQK 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+PI+L+GGGT+++GDP+ R + R+MM  +EI+ N +  K   S FI++G GK  A+M
Sbjct: 62  AGHRPIALIGGGTAMVGDPTGRTDMRKMMTREEIKHNADCFKKQLSKFIEFGEGK--AIM 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           ++N  WL  + YI+ LR+IG  FSVNRML+ E  +SRL+R   LSF+EFNYM++Q+YDF+
Sbjct: 120 VDNADWLLDLNYIEFLRDIGVHFSVNRMLTAECFKSRLER--GLSFIEFNYMLMQSYDFL 177

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           +L K Y C +Q+GG DQW NI+ GIDL  R +  +++ +T  LLTT+ G KMGKT  GA+
Sbjct: 178 KLYKEYGCIMQLGGDDQWSNILGGIDLIRRKEGKEVYGMTFTLLTTSEGKKMGKTEKGAL 237

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
           WL+   TSPY F+QYWRNI DADV+   K LT +PM EI+  AKL+ +EIN AKK +A E
Sbjct: 238 WLDANKTSPYEFYQYWRNIHDADVIKCLKLLTFVPMEEIEEYAKLKDQEINIAKKRLAFE 297

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           +T ++HG EEA  A   A   F+    + +MPT  ++  E+S G+ ++ L++K     S 
Sbjct: 298 VTKLIHGEEEALNAQKTAEALFEKGASTDNMPTTEVASGELSNGINIIDLLLKTKLIPSK 357

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            E RR ++   I +N+  +      + + DF + G + +  GKK +    L 
Sbjct: 358 GEGRRLIEQGGISVNDVRVEGFDRLVTMDDF-NNGELIIKKGKKTYHRVKLV 408


>gi|163868345|ref|YP_001609554.1| tyrosyl-tRNA synthetase [Bartonella tribocorum CIP 105476]
 gi|161018001|emb|CAK01559.1| Tyrosyl-tRNA synthetase [Bartonella tribocorum CIP 105476]
          Length = 417

 Score =  533 bits (1374), Expect = e-149,   Method: Composition-based stats.
 Identities = 251/415 (60%), Positives = 323/415 (77%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M AFKSDFL I+SERGFIHQIS+ + LD L S+  V+AY G+D TASSLHAG L Q+M+L
Sbjct: 1   MFAFKSDFLHIMSERGFIHQISDEKGLDDLFSKETVSAYTGFDPTASSLHAGSLLQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
           +WLQKTGH+PI+LMGGGT +IGDPSF+DE+RR++  ++I  NI+ IK +F++++ +G  +
Sbjct: 61  YWLQKTGHRPIALMGGGTGLIGDPSFKDEARRLLTQEDIAANIDGIKKVFANYLTFGDRE 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           TDA ++NN  WLC + Y++ LR++G  FSVNRMLSF+SVR RL+RE SLSFLEFNYMILQ
Sbjct: 121 TDACIVNNAEWLCHLNYLEFLRDVGKHFSVNRMLSFDSVRLRLEREHSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVEL K Y  R+QMGGSDQWGNII GI+LG RL TP+L+ALTSPLLTT+SG KMGK+
Sbjct: 181 AYDFVELYKRYGLRMQMGGSDQWGNIINGIELGHRLGTPQLYALTSPLLTTSSGAKMGKS 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           L+GA+WLN +M SPY FWQYWRN +DADV  F K  TTLPM EI +++ LQG EINEAKK
Sbjct: 241 LNGAVWLNADMLSPYQFWQYWRNTEDADVTRFLKLYTTLPMDEILKLSLLQGTEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+ATE+T M+HGR  A+ AA  A + F+     +++PT+ +S  E+  G GLL+L+VKAG
Sbjct: 301 ILATEVTAMLHGRALADAAAETARKTFEEKTLGENLPTVEMSAIELKTGTGLLSLLVKAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            A S +EARRH++   I++N+ II +E   I  +D  + G IKLSFGKK HI+  
Sbjct: 361 LAKSNSEARRHIQGGGIRVNDQIIKDETHLIIEKDVTAEGIIKLSFGKKKHILIK 415


>gi|325293230|ref|YP_004279094.1| Tyrosyl-tRNA synthetase [Agrobacterium sp. H13-3]
 gi|325061083|gb|ADY64774.1| Tyrosyl-tRNA synthetase [Agrobacterium sp. H13-3]
          Length = 417

 Score =  533 bits (1373), Expect = e-149,   Method: Composition-based stats.
 Identities = 244/415 (58%), Positives = 318/415 (76%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  FKSDFL  L ERGFIHQIS+   LD L ++  VTAYIGYD TASSLH GHLTQ+M+L
Sbjct: 1   MSRFKSDFLRTLDERGFIHQISDESGLDELFAKETVTAYIGYDPTASSLHVGHLTQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            W+QKTGH+PISLMGGGT ++GDPSF++E+R++M    I++NI  +K +F++++ Y   +
Sbjct: 61  HWMQKTGHQPISLMGGGTGMVGDPSFKEEARKLMTIDMIEDNITSLKHVFANYLDYDRAE 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
             ALM+NN  WL  + Y++ LR++G  FSVNRMLSF+SV++RL REQSLSFLEFNYMILQ
Sbjct: 121 NPALMINNADWLRGLNYLEFLRDVGRHFSVNRMLSFDSVKTRLDREQSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVEL +   CRLQMGGSDQWGNII GIDLG R+ TP+L+ALTSPLLTT+SG KMGK+
Sbjct: 181 AYDFVELNQRTGCRLQMGGSDQWGNIINGIDLGHRMGTPQLYALTSPLLTTSSGAKMGKS 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
            SGA+WLNK++   Y+FWQYWRN +DADVV FAK  TTLPM EI+R+A L G EINEAKK
Sbjct: 241 ASGAVWLNKDLLPVYDFWQYWRNTEDADVVRFAKLFTTLPMDEIERIAALGGSEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+ATE+T ++HGR  AE+AA  A + F+    ++++P+I +   E+  G+G+L+LIV+AG
Sbjct: 301 ILATEVTAILHGRAAAEEAAETARKTFEEGALAENLPSIEVPASELDAGVGVLSLIVRAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            A S  EARRH++  A+KIN+  +S+++  I   +    G IKLS GKK H++  
Sbjct: 361 LAGSNGEARRHVQGGAVKINDKGVSDDRQMIGSAEITGDGIIKLSVGKKKHVLVR 415


>gi|319898911|ref|YP_004159004.1| Tyrosyl-tRNA synthetase [Bartonella clarridgeiae 73]
 gi|319402875|emb|CBI76426.1| Tyrosyl-tRNA synthetase [Bartonella clarridgeiae 73]
          Length = 417

 Score =  533 bits (1373), Expect = e-149,   Method: Composition-based stats.
 Identities = 246/415 (59%), Positives = 320/415 (77%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M AFKS+FL I++ERGFI+QIS+ + LD L S+  VTAYIG+D TASSLHAG L Q+M+L
Sbjct: 1   MFAFKSEFLHIMNERGFINQISDKKGLDDLFSKETVTAYIGFDPTASSLHAGSLLQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
           +WLQKTGH+PI LMGGGT +IGDPSF+DE+RR++   +I ENI  I+ IF+ ++ +G  K
Sbjct: 61  YWLQKTGHRPIVLMGGGTGLIGDPSFKDEARRLLTHNDIAENITSIEKIFTKYLTFGDKK 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           TDA ++NN  WLC + Y++ LR++G +FSVNRMLSF+SVR RL+RE SLSFLEFNYMILQ
Sbjct: 121 TDACIVNNVEWLCHLNYLEFLRDVGKYFSVNRMLSFDSVRLRLEREYSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVEL K Y  RLQMGGSDQWGNI+ GI+LG RL TP+L+ALTSPLLT +SGTKMGK+
Sbjct: 181 AYDFVELNKRYGLRLQMGGSDQWGNIVNGIELGHRLGTPQLYALTSPLLTASSGTKMGKS 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           L+GAIWLN +M SPY FWQYWRN +D DV  F K  TTL M+EI +++ LQ  EINEAKK
Sbjct: 241 LNGAIWLNADMLSPYQFWQYWRNTEDLDVTRFLKLYTTLSMTEIAKLSALQSTEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+ATE+T M+HGR  A +A   A + F+     +++P+I I+  E+  G+GLLTL+V+AG
Sbjct: 301 ILATEVTAMLHGRALANEALETARKTFEEKTFGENLPSIEINATELKIGIGLLTLLVRAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            A S +EARR+++   ++IN+ II +E   I  +D ++   IKLSFGKK H++  
Sbjct: 361 LAKSNSEARRYVQGGGVRINDQIIEDEMYFIVEKDVNANEVIKLSFGKKKHVLIK 415


>gi|114704656|ref|ZP_01437564.1| tyrosyl-tRNA synthetase [Fulvimarina pelagi HTCC2506]
 gi|114539441|gb|EAU42561.1| tyrosyl-tRNA synthetase [Fulvimarina pelagi HTCC2506]
          Length = 416

 Score =  532 bits (1370), Expect = e-149,   Method: Composition-based stats.
 Identities = 242/415 (58%), Positives = 310/415 (74%), Gaps = 1/415 (0%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  F+SDFL  LSERGFIHQ S+   LD L     VT YIG+D TA SLH G L Q+M+L
Sbjct: 1   MSGFRSDFLHALSERGFIHQTSDDTRLDDLFRTETVTGYIGFDPTAKSLHVGSLIQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            W+QKTGHKPI+LMGGGT +IGDPSF+DE+R++  S+ I+EN+  I+  F +++  G G+
Sbjct: 61  HWMQKTGHKPIALMGGGTGMIGDPSFKDEARKLQTSETIEENLAGIRRGFENYLTMGDGQ 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           TDA+M+NN  WL  I Y+  LR++G  FSVNRMLSFESV+ RL REQSLSFLEFNYMILQ
Sbjct: 121 TDAVMVNNADWLLDINYVAFLRDVGRHFSVNRMLSFESVKLRLDREQSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVEL K Y CRLQMGGSDQWGNI+ GIDLG R++  +LFALTSPLLTT+SG KMGKT
Sbjct: 181 AYDFVELYKRYGCRLQMGGSDQWGNIVNGIDLGRRMEGAELFALTSPLLTTSSGAKMGKT 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
             GA+WLN +M SPY+FWQYWRN +DADV  F K  T +PM EI R+A L G EIN+AKK
Sbjct: 241 ADGAVWLNPDMKSPYDFWQYWRNTEDADVERFLKLYTVMPMDEIARLANLGGSEINDAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
            +ATE+T M+HGRE A+ AA  A + F+  I S+++P+I++   E+  G GLL+++V AG
Sbjct: 301 TLATEVTAMLHGREAADAAAETARQTFEEGIASENLPSIAVPSAELETGTGLLSVLVAAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            A S  EARRH+K  A+K+N+  +S+E++Q+ ++     G+IKLS G+K H +  
Sbjct: 361 LAGSNGEARRHIKGGAVKVNDETVSDERMQLDMK-LTRDGSIKLSVGRKKHALVK 414


>gi|316934384|ref|YP_004109366.1| tyrosyl-tRNA synthetase [Rhodopseudomonas palustris DX-1]
 gi|315602098|gb|ADU44633.1| tyrosyl-tRNA synthetase [Rhodopseudomonas palustris DX-1]
          Length = 418

 Score =  531 bits (1369), Expect = e-149,   Method: Composition-based stats.
 Identities = 232/418 (55%), Positives = 311/418 (74%), Gaps = 1/418 (0%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M AFKSDF+++L  RGFIHQIS+P  LD L ++G V AY+GYD TA+SLH GHL  +M+L
Sbjct: 1   MTAFKSDFMNVLQSRGFIHQISDPDSLDALAAKGEVVAYVGYDCTAASLHVGHLLSIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            WLQ TG+KPI+LMGGGT+ +GDPS RDE+R+++  ++I  N E IKG FS FIK+G G 
Sbjct: 61  HWLQATGNKPIALMGGGTTRVGDPSGRDETRKILTYEQIDANKESIKGTFSKFIKFGDGH 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           +DA+M +N  WL  + YI++LR++G  FS+NRML+ +SV+ RL REQ LSF+EFNYMILQ
Sbjct: 121 SDAVMADNAEWLTKLNYIEMLRDVGRHFSINRMLTMDSVKLRLDREQELSFIEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           +YDFVELA+ Y C LQMGGSDQWGNI+ G+DLG R+ T +L ALT PLLTTASG KMGKT
Sbjct: 181 SYDFVELARRYKCNLQMGGSDQWGNIVNGVDLGRRMGTHQLHALTCPLLTTASGAKMGKT 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
            +GA+WLN +M +PY++WQYWRN +DADV  F K  T LPM EI+R++KLQG EIN+AKK
Sbjct: 241 AAGAVWLNGDMLAPYDYWQYWRNTEDADVGRFLKLFTLLPMDEIERLSKLQGAEINDAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVK-A 359
           I+ATE T ++HGRE AEKA   A   F+    +Q +P++ I++ E+  G+G+L    +  
Sbjct: 301 ILATEATALMHGREAAEKAEATARTTFEQGGTAQDLPSVEIARAELDAGIGVLAAFAEKT 360

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           G   S  EARR +K+  +K+N++ +++EK+ +   D  + G IKLS GKK H++  L 
Sbjct: 361 GLVASNGEARRQIKAGGLKVNDAPVTDEKMTLTATDLSADGVIKLSMGKKKHVLLRLA 418


>gi|319407238|emb|CBI80877.1| Tyrosyl-tRNA synthetase [Bartonella sp. 1-1C]
          Length = 417

 Score =  531 bits (1369), Expect = e-149,   Method: Composition-based stats.
 Identities = 250/415 (60%), Positives = 320/415 (77%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M AFKS+FL I+SERGFIHQIS+ + LD L  +  VTAYIG+D TASSLHAG L Q+M+L
Sbjct: 1   MYAFKSEFLRIISERGFIHQISDEKGLDDLFLKETVTAYIGFDPTASSLHAGSLLQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            WLQKTGH+PI LMGGGT +IGDPSF+DE+RR++   +I ENI  IK IF+S++ +G  K
Sbjct: 61  HWLQKTGHRPIVLMGGGTGLIGDPSFKDEARRLLTHNDISENIMSIKKIFTSYLTFGDKK 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           TDA ++NN  WLC++ Y++ LR +G +FSVNRMLSF+SVR RL+RE SLSFLEFNYMILQ
Sbjct: 121 TDACIVNNAEWLCNLSYLEFLRSVGKYFSVNRMLSFDSVRLRLEREHSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVEL K YD R+QMGGSDQWGNI+ GI+LG RL TP+L+ALTSPLLTT+SG KMGK+
Sbjct: 181 AYDFVELNKRYDLRVQMGGSDQWGNIVNGIELGHRLGTPQLYALTSPLLTTSSGAKMGKS 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           L+GAIWLN +M SPY FWQYWRN +D DV  F K  TTLP++EI +++ L+  EINEAKK
Sbjct: 241 LNGAIWLNADMLSPYQFWQYWRNTEDLDVTRFLKLYTTLPLTEIAKLSALKSTEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+ATEIT M+HGR  A +A   A + F+     +++P+I I+  E+  G+GLLTL+V+AG
Sbjct: 301 ILATEITAMLHGRTLANEALETARKTFEEKTFGENLPSIKINATELKVGIGLLTLLVQAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            A S +EARR+++   I++N+ II NE   I  +D +    IKLSFGKK H++  
Sbjct: 361 LAKSNSEARRYVQGGGIRVNDQIIENETHLIVEKDVNVDEVIKLSFGKKKHVLIK 415


>gi|319405666|emb|CBI79289.1| Tyrosyl-tRNA synthetase [Bartonella sp. AR 15-3]
          Length = 417

 Score =  530 bits (1367), Expect = e-148,   Method: Composition-based stats.
 Identities = 245/415 (59%), Positives = 319/415 (76%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M AFKS+FL  +SERGFIHQIS+ + LD L  +  VTAYIG+D TASSLHAG L Q+M+L
Sbjct: 1   MFAFKSEFLHTISERGFIHQISDEKGLDDLFLKETVTAYIGFDPTASSLHAGSLLQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            WLQKTGH+PI LMGGGT +IGDPSF+DE+RR++   +I ENI  IK IF++++ +G  K
Sbjct: 61  HWLQKTGHRPIILMGGGTGLIGDPSFKDEARRLLTHNDIIENIMSIKKIFTNYLTFGNKK 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           TDA ++NN  WLC + Y++ LR +G +FS+NRMLSF+SVR RL+RE SLSFLEFNYMILQ
Sbjct: 121 TDACIVNNAEWLCHLNYLEFLRNVGKYFSINRMLSFDSVRLRLEREHSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVEL K Y  R+QMGGSDQWGNI+ GI+LG RL TP+L+ALTSPLLTT+SG KMGK+
Sbjct: 181 AYDFVELNKRYGLRVQMGGSDQWGNIVNGIELGHRLGTPQLYALTSPLLTTSSGAKMGKS 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           L+GAIWLN +M SPY FWQYWRN +D DV  F K  TTLPM+EI +++ L+  EINEAKK
Sbjct: 241 LNGAIWLNADMFSPYEFWQYWRNTEDLDVTRFLKLYTTLPMTEIAKLSALKSAEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+ATE+T M+HGR  A +A   A + F+  +  +++P I I+  E+  G+G+LTL+VKAG
Sbjct: 301 ILATEVTAMLHGRTLANEALETACKTFEEKMFGENLPNIKINATELKAGIGVLTLLVKAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            A S +EARR+++   +++N+ II +EK  I  +D ++   IKLSFGKK H++  
Sbjct: 361 LARSNSEARRYIQGGGVRVNDQIIEDEKHLIVEKDVNANEVIKLSFGKKKHVLIK 415


>gi|92117855|ref|YP_577584.1| tyrosyl-tRNA synthetase [Nitrobacter hamburgensis X14]
 gi|91800749|gb|ABE63124.1| tyrosyl-tRNA synthetase [Nitrobacter hamburgensis X14]
          Length = 418

 Score =  530 bits (1366), Expect = e-148,   Method: Composition-based stats.
 Identities = 226/416 (54%), Positives = 305/416 (73%), Gaps = 1/416 (0%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M AFKSDFL+IL ERGFIHQ S+   LD L ++G  TAY+GYD TA SLH G+   +M+L
Sbjct: 1   MAAFKSDFLNILQERGFIHQCSDVEGLDALAAKGQATAYVGYDCTAPSLHIGNYLTMMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
           +WLQ++G+KPI+LMGGGT+++GDPS +DESR +    EI+ N   I+G+F+  + YG+G 
Sbjct: 61  YWLQQSGNKPITLMGGGTTMVGDPSGKDESRAIRSVAEIEANKASIRGVFAKVLHYGSGA 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
            DA+ML+N  WL  + +I++LR+IG  FSVNRML+ +SVR RL+REQ +SF+EFNYM+ Q
Sbjct: 121 NDAVMLDNAEWLTKLNWIEMLRDIGRHFSVNRMLTMDSVRLRLEREQEMSFIEFNYMVCQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVEL++   CRLQMGGSDQWGNI+ G+DLG R+ TP+LFALT+PLLTTASG KMGKT
Sbjct: 181 AYDFVELSRRVGCRLQMGGSDQWGNIVNGVDLGRRMGTPQLFALTTPLLTTASGAKMGKT 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
             GA+WLN +  SPY+FWQYWRN++DADVV F K  T LPM EI ++A L+  EINEAKK
Sbjct: 241 AQGAVWLNADAFSPYDFWQYWRNVEDADVVRFLKLFTILPMDEIAKLAALRDAEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVK-A 359
           ++ATE T ++HGR+EAEKAA  A   F+    ++ +PT+ I   E+ +G+G+L    + A
Sbjct: 301 VLATEATALLHGRDEAEKAADTARTTFEQGAIAESLPTVDIPHSELKKGIGVLVAFSERA 360

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
               S  EARR +KS  +++N+  +++EK+ +        G IKLS GKK H++  
Sbjct: 361 RLVASNGEARRQIKSGGLRVNDVAVTDEKMMLTSDHLTPEGVIKLSMGKKRHVLLR 416


>gi|319408607|emb|CBI82262.1| Tyrosyl-tRNA synthetase [Bartonella schoenbuchensis R1]
          Length = 417

 Score =  530 bits (1366), Expect = e-148,   Method: Composition-based stats.
 Identities = 250/415 (60%), Positives = 321/415 (77%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M AFKS+FL I+SERGFIHQIS+ + LD L S+ +VTAYIG+D TA SLHAG L Q+M+L
Sbjct: 1   MFAFKSEFLHIMSERGFIHQISDEKGLDDLFSKEIVTAYIGFDPTALSLHAGSLLQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            WLQKTGH+PI LMGGGT +IGDPSF+DE+RR++   +I +NI  I+ +F++++ +G GK
Sbjct: 61  HWLQKTGHRPIVLMGGGTGVIGDPSFKDEARRLLTHDDIAKNIVGIEKVFANYLTFGDGK 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           TDA ++NN  WLC +KY++ LR+IG  FSVNRMLSF+SV+ RL+RE  LSFLEFNYMILQ
Sbjct: 121 TDARIVNNAEWLCDLKYLEFLRDIGKHFSVNRMLSFDSVKLRLERENFLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVEL K Y  R+QMGGSDQWGNII GI+LG RL  P+L+ALTSPLLTT+SG KMGK+
Sbjct: 181 AYDFVELNKRYGLRVQMGGSDQWGNIINGIELGHRLGAPQLYALTSPLLTTSSGAKMGKS 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           L+GAIWLN +M SPY FWQYWRN +DADV+ F K  TTLPM+EI R++ LQG EINEAKK
Sbjct: 241 LNGAIWLNSDMLSPYQFWQYWRNTEDADVIRFLKLYTTLPMNEIARLSTLQGTEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+ATEIT M+HG+  A+ AA  A + F+    + ++PTI I+  E+  G GLL+L+V+AG
Sbjct: 301 ILATEITAMLHGKALADAAAETARKTFEEKTLADNLPTIEINATELKIGTGLLSLLVQAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            A S +EARRH++   +++N+ I+ +E   I   D    G IKLSFGKK H++  
Sbjct: 361 LAKSNSEARRHVQGGGVRVNDKIVEDETRLIVEDDVSEIGVIKLSFGKKKHVLIK 415


>gi|328543676|ref|YP_004303785.1| Tyrosyl-tRNA synthetase protein [polymorphum gilvum SL003B-26A1]
 gi|326413420|gb|ADZ70483.1| Tyrosyl-tRNA synthetase protein [Polymorphum gilvum SL003B-26A1]
          Length = 418

 Score =  530 bits (1365), Expect = e-148,   Method: Composition-based stats.
 Identities = 218/415 (52%), Positives = 298/415 (71%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  FKS+FL  L +RGFIHQIS+P+ LD LC+   VTAYIG+D TA SLH G L Q+M+L
Sbjct: 1   MTEFKSEFLKTLGDRGFIHQISDPKGLDKLCASETVTAYIGFDCTAPSLHVGSLVQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
           +WLQ+TGH+PI+LMGGGT+ +GDPS +DESR+++  + I+ N   I+ +F   + +G G 
Sbjct: 61  YWLQQTGHRPIALMGGGTTRVGDPSGKDESRQLLTPETIEANKAGIRKVFERLLVFGDGP 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           TDALM++N  WL  + Y+D LRE+G  FSVN+M+  +SVR RL+RE  LSFLEFNYM+LQ
Sbjct: 121 TDALMMDNADWLLKLNYVDFLREVGRHFSVNQMIQRDSVRLRLEREHHLSFLEFNYMLLQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
            YD++E+ +   CRLQMGGSDQWGNI+ G+DL  R++  + FALTSPLLTTASG KMGKT
Sbjct: 181 GYDYLEIYRRTGCRLQMGGSDQWGNILSGVDLTRRMEGTETFALTSPLLTTASGAKMGKT 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
            +GA+WLN++  S Y++WQYWRN +DADV  F K  TTLP+ EI R+A L+G EINEAKK
Sbjct: 241 AAGAVWLNEDQLSSYDYWQYWRNTEDADVERFLKLFTTLPLDEIARLAALEGAEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
            +ATE T +VHGR  AE AA  A + F+       +PT+ +   ++  G+G+L   V AG
Sbjct: 301 TLATEATALVHGRAAAEAAAETARKAFEEGETDAGLPTVDLPAAQLDAGLGILNAFVAAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
              S  E RR++K  A+++N+++++++ LQ+   D  + G IKLS GKK H++  
Sbjct: 361 LCASNGEVRRNIKGGAVRVNDAVVADDTLQLTGADVTAQGVIKLSLGKKKHVLLR 415


>gi|144898140|emb|CAM75004.1| tyrosyl-tRNA synthetase [Magnetospirillum gryphiswaldense MSR-1]
          Length = 421

 Score =  529 bits (1364), Expect = e-148,   Method: Composition-based stats.
 Identities = 211/415 (50%), Positives = 286/415 (68%), Gaps = 1/415 (0%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M   +S+FL +++ERG++HQ ++   LD   +QG   AYIG+D TA SLH G L Q+MLL
Sbjct: 6   MTTARSEFLRVVAERGYMHQCTDLEALDKRLNQGPAAAYIGFDCTAESLHVGGLMQIMLL 65

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            W QKTG+KPI LMGGGT+ IGDP+ +DE+R+M+    I  N+  IK +F+ ++ +G G 
Sbjct: 66  RWWQKTGNKPIVLMGGGTTRIGDPTGKDEARKMLDDAAIAHNMAGIKQVFAKYLTFGDGA 125

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           TDA+M+NN  WL  + YI  LR+ G  F++NRML+F+SV+ RL+REQ L+FLEFNYMILQ
Sbjct: 126 TDAMMVNNADWLDQLNYISFLRDYGKHFTINRMLTFDSVKLRLEREQPLTFLEFNYMILQ 185

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
            YDF EL   + C LQMGGSDQWGNII G++LG R+   +LF LTSPLLTT+SG KMGKT
Sbjct: 186 GYDFAELWSRHKCVLQMGGSDQWGNIINGVELGRRVHQAELFGLTSPLLTTSSGAKMGKT 245

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           + GA+WLN +M S + FWQYWRN +DADV  F K  T LPM EI R+  LQG EINEAKK
Sbjct: 246 VGGAVWLNADMLSAWEFWQYWRNTEDADVGRFLKLYTELPMEEIARLEALQGAEINEAKK 305

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+A E+T + HG E A +AA  A + F+    S ++PTI+I   +++ G+    L V+AG
Sbjct: 306 ILAHEVTKLCHGEESAREAAETARKTFEQGGVSDNLPTIAIPAADLNAGIPAFALFVRAG 365

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            +TS  EARR L+    ++N++ +++    I   D    G IKL+ GKK +++  
Sbjct: 366 LSTSNGEARRLLQQGGGRVNDAQVTDPAAPIGA-DALKDGVIKLTAGKKRNVLVK 419


>gi|90417698|ref|ZP_01225610.1| tyrosyl-tRNA synthetase [Aurantimonas manganoxydans SI85-9A1]
 gi|90337370|gb|EAS51021.1| tyrosyl-tRNA synthetase [Aurantimonas manganoxydans SI85-9A1]
          Length = 417

 Score =  528 bits (1361), Expect = e-148,   Method: Composition-based stats.
 Identities = 230/415 (55%), Positives = 302/415 (72%), Gaps = 1/415 (0%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  FKS+FL+ L+ERGFIHQ S+   LD L     VT YIG+D TA+SLH G L Q+M+L
Sbjct: 1   MTRFKSEFLATLAERGFIHQTSDDNGLDDLFRSETVTGYIGFDPTAASLHVGSLMQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            W+Q+TGH+PI+LMGGGT +IGDPSF+DE+R++     I  N+  IK  F  +I++G G 
Sbjct: 61  HWMQQTGHRPIALMGGGTGMIGDPSFKDEARKLQTEDTIASNLAGIKRSFQPYIRFGDGP 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           TDA+M++N  WL  + Y+  LR++G  FSVNRMLSF+SV+ RL REQSLSFLEFNYMILQ
Sbjct: 121 TDAVMVDNAEWLLELNYVAFLRDVGRHFSVNRMLSFDSVKLRLDREQSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVEL K   C+LQMGGSDQWGNI+ GIDLG R++   L+ALTSPLLTT+SG KMGKT
Sbjct: 181 AYDFVELYKRTGCKLQMGGSDQWGNIVNGIDLGRRMEGADLYALTSPLLTTSSGAKMGKT 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
            SGAIWLN +M S Y+FWQYWRN +DADV  F K  TTLPM EI R+  L G EIN+AKK
Sbjct: 241 ASGAIWLNDDMLSAYDFWQYWRNTEDADVGRFLKLYTTLPMDEIARLEALGGSEINDAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           ++A E+T M+HGR  AE +A  A + F+    +  +PTI +    ++ G+GLL+L+V AG
Sbjct: 301 VLANEVTAMLHGRAAAEASAETARKTFEEGALADSLPTIEVPAASLAEGVGLLSLLVSAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            A+S  EARRH+K  A+++N++ +++E+L +   D    G +KLS G+K H++  
Sbjct: 361 LASSNGEARRHIKGGAVRVNDAQVTDERLMVGT-DALVQGVVKLSVGRKKHVLVR 414


>gi|312112867|ref|YP_004010463.1| tyrosyl-tRNA synthetase [Rhodomicrobium vannielii ATCC 17100]
 gi|311217996|gb|ADP69364.1| tyrosyl-tRNA synthetase [Rhodomicrobium vannielii ATCC 17100]
          Length = 420

 Score =  528 bits (1360), Expect = e-148,   Method: Composition-based stats.
 Identities = 211/414 (50%), Positives = 300/414 (72%)

Query: 2   PAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
           PA  SDF+ IL ERG++HQ+S+   L    ++G +TAYIG+D TA SLH GHL  +M+L 
Sbjct: 4   PATHSDFVQILKERGYLHQVSDEEGLRKRAAEGRITAYIGFDCTAPSLHVGHLISIMMLR 63

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKT 121
            LQK+GH+PI L+GGGT+ +GDPS +DE R+++   +I  N   +K ++  F+ +G G  
Sbjct: 64  ILQKSGHRPIVLLGGGTTKVGDPSGKDEQRKILSQADIDFNKASLKTVYERFLTFGDGPA 123

Query: 122 DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA 181
           DA+M +N+ WL S++YI+ LR+ G  F++NRML+F+SV+ RL REQ L+FLEFNYM+LQA
Sbjct: 124 DAIMADNDEWLSSLRYIEFLRDYGRHFTINRMLTFDSVKLRLDREQPLTFLEFNYMLLQA 183

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
           YDF+EL++ Y C LQMGGSDQWGNI+ G++LG R+   +LFALT+PLLTT+SG KMGK+ 
Sbjct: 184 YDFLELSRRYGCVLQMGGSDQWGNIVNGMELGRRVDGRELFALTTPLLTTSSGAKMGKSA 243

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKI 301
            GA+WLN ++ SPY +WQYWRN +D DV  F K  T +P+ EI R+  LQG EINEAKKI
Sbjct: 244 GGAVWLNADLLSPYEYWQYWRNTEDGDVGRFLKLFTEMPLDEIARLEALQGAEINEAKKI 303

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGF 361
           +ATE+T ++HGRE AE AA  A   F+    ++ +PT+ I + E++ G+G+L   VKAG 
Sbjct: 304 LATEVTALLHGREAAETAADTARRAFEEGAAAEGLPTVEIPRGELAEGVGILNAAVKAGL 363

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
             ST++ARR +K  A+K+N+  +++++  + L + D+ G IKLS GKK H++  
Sbjct: 364 VASTSDARRQIKGGALKVNDVAVTDDRASVSLANLDAEGVIKLSLGKKRHVLLK 417


>gi|115524978|ref|YP_781889.1| tyrosyl-tRNA synthetase [Rhodopseudomonas palustris BisA53]
 gi|115518925|gb|ABJ06909.1| tyrosyl-tRNA synthetase [Rhodopseudomonas palustris BisA53]
          Length = 418

 Score =  528 bits (1360), Expect = e-148,   Method: Composition-based stats.
 Identities = 226/416 (54%), Positives = 307/416 (73%), Gaps = 1/416 (0%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M AFKSDFL+IL  RGFIHQIS+P  LD L ++G   AY+GYD TA+SLH GHL  +M+L
Sbjct: 1   MTAFKSDFLNILQSRGFIHQISDPDSLDALAAKGDAVAYVGYDCTAASLHVGHLLSIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            WLQ+TG+KPI+LMGGGT+ +GDPS RDE+R+++  ++I  N + IKG F+  I +G GK
Sbjct: 61  HWLQQTGNKPIALMGGGTTRVGDPSGRDETRKILTYEQIDANKDSIKGTFAKMITFGDGK 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
            DA+M +N  WL  + YI++LR++G  FS+NRML+ +SV+ RL+REQ LSF+EFNYMILQ
Sbjct: 121 ADAIMADNAEWLTKLNYIEMLRDVGRHFSINRMLTMDSVKMRLEREQELSFIEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           +YDFVELA+ Y C LQMGGSDQWGNI+ G+DLG R+ T +L ALT PLLTT+SG KMGKT
Sbjct: 181 SYDFVELARRYGCNLQMGGSDQWGNIVNGVDLGRRMGTHQLHALTCPLLTTSSGAKMGKT 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
            +GA+WLN +M S Y++WQYWRN +DADV  F K  T L M E+ R+AKLQG EIN+AKK
Sbjct: 241 AAGAVWLNADMLSAYDYWQYWRNTEDADVERFLKLFTLLSMDEVARLAKLQGAEINDAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVK-A 359
           ++ATE T ++HGRE AEKA   A   F+    +Q +P++ ++K E+  G+G+L    + +
Sbjct: 301 VLATEATALMHGREAAEKAEATARTTFEQGGTAQDLPSVEVTKAELDAGIGVLAAFAEKS 360

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           G   S  EARR +K+  +++N+  +++EK+ +   D  + G IKLSFGKK H++  
Sbjct: 361 GLVASNGEARRQIKAGGLRVNDVAVTDEKMALTAADLSADGVIKLSFGKKKHVLLR 416


>gi|303241869|ref|ZP_07328363.1| tyrosyl-tRNA synthetase [Acetivibrio cellulolyticus CD2]
 gi|302590543|gb|EFL60297.1| tyrosyl-tRNA synthetase [Acetivibrio cellulolyticus CD2]
          Length = 409

 Score =  527 bits (1358), Expect = e-147,   Method: Composition-based stats.
 Identities = 181/411 (44%), Positives = 267/411 (64%), Gaps = 5/411 (1%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S     L +RGFI Q+++   +  L  +  VT YIG+D TA SLH GH  Q++++  +Q+
Sbjct: 2   SSVFETLKQRGFIAQVTHEETVRELLEKEKVTFYIGFDPTADSLHVGHFLQMVVMAHMQR 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKPI+++GGGT+++GDPS + + RRMM  +EIQ N    K   S+FI +   K  A+M
Sbjct: 62  AGHKPIAIIGGGTAMVGDPSGKTDMRRMMTREEIQSNANNFKKQLSNFIDFSDNK--AIM 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           ++N  WL  + Y+  LRE+G  FSVNRML+ E  +SRL  E+ LSF+EFNYM++Q+YDF+
Sbjct: 120 VDNADWLLDLNYVKFLREVGVHFSVNRMLTAECFKSRL--EKGLSFIEFNYMLMQSYDFL 177

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           +L +++ C L++GG DQW NI+ GI+L  R++    + +T  LLTT+ G KMGKT  GA+
Sbjct: 178 KLYQDHGCLLELGGDDQWSNILYGIELIRRVEGKDAYGMTFTLLTTSEGKKMGKTEKGAL 237

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
           WL+   T PY+F+QYWRNI+D+DV+   K LT LP+SEID +AKL+ ++INEAKKI+A E
Sbjct: 238 WLDPNKTPPYDFYQYWRNINDSDVIKCLKLLTFLPLSEIDELAKLKDQQINEAKKILAYE 297

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           +T ++HG EEA KA +AA   F     S++MPT  I  +E++ G+ +L L+VK   A S 
Sbjct: 298 VTKLIHGEEEAGKAQSAAEALFVKGASSENMPTTEIGTEELANGINILDLLVKTKLAPSK 357

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            E RR ++   + +N   +      +K +DF     I +  GKK +    +
Sbjct: 358 GEGRRLIEQGGVSVNEEKVDKIDFMVKEEDFKDD-EIIIKKGKKVYHKVKI 407


>gi|163794305|ref|ZP_02188277.1| Tyrosyl-tRNA synthetase, class Ib [alpha proteobacterium BAL199]
 gi|159180473|gb|EDP64994.1| Tyrosyl-tRNA synthetase, class Ib [alpha proteobacterium BAL199]
          Length = 417

 Score =  526 bits (1356), Expect = e-147,   Method: Composition-based stats.
 Identities = 205/417 (49%), Positives = 286/417 (68%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M   +SDFL  +++RGF HQ ++   LD   S  +VT YIG+D TA SLH G L Q+MLL
Sbjct: 1   MTTPRSDFLKAITDRGFFHQCTDLEALDAEFSSKMVTGYIGFDCTADSLHIGSLLQIMLL 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            W+QKTGHKPI LMGGGTS +GDPSF+DE+R+++  ++I  N   I  +F  ++ +G   
Sbjct: 61  RWMQKTGHKPIVLMGGGTSKVGDPSFKDEARKLLSEEDIARNKAGILQVFDKYLAFGDAA 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           TDA+M++N  WL  ++YI  LR+ G+ FSVNRMLSF+SV+ RL+REQSLSFLEFNYMILQ
Sbjct: 121 TDAVMVDNADWLDKLEYIPFLRDYGAHFSVNRMLSFDSVKLRLEREQSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDF+EL + Y C LQMGGSDQWGNI+ G++L  R+    +F LTSPL+TT+SG KMGKT
Sbjct: 181 AYDFLELRRRYGCVLQMGGSDQWGNIVNGVELTRRVDQQTIFGLTSPLITTSSGAKMGKT 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
             GA+WLN +  S Y+FWQ+WRN DDADV  F K  T +P+ E+ ++  L G EINEAKK
Sbjct: 241 AQGAVWLNADRLSVYDFWQFWRNTDDADVGRFLKLFTEMPLDEVAKLEALGGTEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+ATE+T + HGR  A+ AA  A + F+    ++ +P++ + + E++ G+ ++  + +AG
Sbjct: 301 ILATEVTALCHGRAAADDAAETARQTFEAGNSAEGLPSVDVPRSELASGLSVVEALRRAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            A S  EARR ++    ++N+  + +E   +     D  G IKLS G+K H +  + 
Sbjct: 361 LAASNGEARRLIRGGGARVNDQPVDDENATLGESSLDGDGVIKLSSGRKRHALLRVA 417


>gi|85716320|ref|ZP_01047293.1| tyrosyl-tRNA synthetase [Nitrobacter sp. Nb-311A]
 gi|85696836|gb|EAQ34721.1| tyrosyl-tRNA synthetase [Nitrobacter sp. Nb-311A]
          Length = 418

 Score =  526 bits (1356), Expect = e-147,   Method: Composition-based stats.
 Identities = 227/416 (54%), Positives = 304/416 (73%), Gaps = 1/416 (0%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M AFKSDFL+IL ERGFIHQ S+   LD L ++G  TAY+GYD TA SLH G+   +M+L
Sbjct: 1   MSAFKSDFLNILQERGFIHQCSDFAGLDALAAKGEATAYVGYDCTAPSLHIGNYLTMMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
           +WLQ++G+KPI+LMGGGT+++GDPS +DESR +    EI+ N   I+G+F   ++YG+G 
Sbjct: 61  YWLQQSGNKPITLMGGGTTMVGDPSGKDESRAIRSVAEIEANKASIRGVFDKVLRYGSGP 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
            DA+ML+N  WL  + +I+ LR+IG  FSVNRML+ +SVR RL+REQ +SF+EFNYM+ Q
Sbjct: 121 NDAVMLDNAEWLTKLNWIETLRDIGRHFSVNRMLTMDSVRLRLEREQEMSFIEFNYMVCQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVEL++   CRLQMGGSDQWGNI+ G+DLG R+ TP+LFALT+PLLTTASG KMGKT
Sbjct: 181 AYDFVELSRRVGCRLQMGGSDQWGNIVNGVDLGRRMGTPQLFALTTPLLTTASGAKMGKT 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
             GA+WLN +  SPY+FWQYWRN++DADV  F K  T LPMSEI ++A L+  EINEAKK
Sbjct: 241 AQGAVWLNADAFSPYDFWQYWRNVEDADVGRFLKLFTILPMSEIAKLAALRDAEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVK-A 359
           ++ATE T ++HGR+EAEKAA  A   F+    ++ +PT+ I  DE+ RG+G+L    + A
Sbjct: 301 VLATEATALLHGRDEAEKAADTARTTFEQGSIAESLPTVDIKHDELERGIGVLVAFSERA 360

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
               S  EARR +K   +++N+  +++EK+ +        G IKLS GKK H++  
Sbjct: 361 RLVASNGEARRQIKGGGLRVNDVAVADEKMILTPDHLTPEGVIKLSMGKKRHVLLR 416


>gi|146340490|ref|YP_001205538.1| tyrosyl-tRNA synthetase [Bradyrhizobium sp. ORS278]
 gi|146193296|emb|CAL77312.1| tyrosine tRNA synthetase [Bradyrhizobium sp. ORS278]
          Length = 417

 Score =  526 bits (1355), Expect = e-147,   Method: Composition-based stats.
 Identities = 223/415 (53%), Positives = 303/415 (73%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  FKSDFL++L  RGFIHQ S+   LD L ++G  TAY+GYD TA SLH G+   +M+L
Sbjct: 1   MTGFKSDFLNVLQSRGFIHQCSDFEGLDTLAAKGQATAYVGYDCTARSLHIGNFLTMMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
           +WLQ+TG+KPI+LMGGGT+++GDPS +DE+R M   +EI+ N   I+G+F+  ++YG G 
Sbjct: 61  YWLQQTGNKPITLMGGGTTMVGDPSGKDETRAMRTVEEIEANKASIRGVFAKVLRYGDGA 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           TDA+ML+N  WL  + +I++LR+IG  FSVNRML+ +SVR RL+REQ +SF+EFNYM+ Q
Sbjct: 121 TDAIMLDNAEWLTKLNWIEMLRDIGRHFSVNRMLTMDSVRLRLEREQEMSFIEFNYMVCQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVEL++   CRLQMGGSDQWGNI+ G++LG R+ T +LFALT+PLLTTASG KMGKT
Sbjct: 181 AYDFVELSRRTGCRLQMGGSDQWGNIVNGVELGRRMGTEQLFALTTPLLTTASGAKMGKT 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
             GAIWLN +  SPY FWQYWRN +DADVV F K  TTLP++EI+++  LQG EINEAKK
Sbjct: 241 AQGAIWLNADQCSPYEFWQYWRNTEDADVVKFLKLFTTLPLAEIEKLGALQGAEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
            +A   TT++HG E A  AA  A   F+    ++++P + +++ E+  G+G+L   VKAG
Sbjct: 301 ALADAATTLLHGGEAARTAAETARRTFEEGAIAENLPKVEVARSELDAGLGVLNAFVKAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
              S  EARR +K   +++N+  +++EK+ +   D  S G IKLS GKK H++  
Sbjct: 361 LVASNGEARRQIKGGGLRVNDVAVTDEKMTLTRADLTSEGVIKLSLGKKRHVLVK 415


>gi|209885123|ref|YP_002288980.1| tyrosyl-tRNA synthetase [Oligotropha carboxidovorans OM5]
 gi|209873319|gb|ACI93115.1| tyrosyl-tRNA synthetase [Oligotropha carboxidovorans OM5]
          Length = 417

 Score =  526 bits (1355), Expect = e-147,   Method: Composition-based stats.
 Identities = 229/415 (55%), Positives = 303/415 (73%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  +KSDFL++L +RG IHQIS+   LD  C++G +TAY+GYD TA+SLH G+L  + +L
Sbjct: 1   MTVYKSDFLNVLEQRGLIHQISDAEGLDDACTKGPITAYVGYDATATSLHIGNLISVTML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
           +WLQ+TGH+PI+LMGGGTS++GDPSFRD+ R+++    I  NIE IK IF   ++YG G 
Sbjct: 61  YWLQQTGHRPITLMGGGTSMVGDPSFRDDQRKLLDEATIASNIEGIKKIFGRILRYGDGP 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           TDALM+NN  WL  + Y+  LR++G +FSVNRMLSF+SV+ RL REQSLSFLEFNYMI+Q
Sbjct: 121 TDALMINNADWLLKLNYVSFLRDVGRYFSVNRMLSFDSVKLRLDREQSLSFLEFNYMIMQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
            YDFVE+ + Y C LQMGGSDQWGNII G+DL  R+  P+L+ALT+PLLTTASG KMGK+
Sbjct: 181 GYDFVEINRRYGCILQMGGSDQWGNIINGVDLSHRMGGPQLYALTTPLLTTASGAKMGKS 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
             GA+WLN E+ SPY+FWQY+RN +DADV  F K  T LP+ EI ++ KL G EINEAKK
Sbjct: 241 AKGAVWLNGELFSPYDFWQYFRNTEDADVGRFLKVFTRLPLDEIAKLEKLGGAEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+ATE T +VHGRE AE+AA  A   F+    ++++PT  I + E+  G G++ L VKAG
Sbjct: 301 ILATEATAVVHGREAAEEAAETARRTFEEGAIAENLPTFEIPQAELEAGAGVVALFVKAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
              S  EARR +K   +++N+  ++++K+ +        G IKLS GKK HI+  
Sbjct: 361 LVASNGEARRQIKGGGLRVNDKPVTDDKMALTPAALTPEGVIKLSLGKKRHILLK 415


>gi|298291329|ref|YP_003693268.1| tyrosyl-tRNA synthetase [Starkeya novella DSM 506]
 gi|296927840|gb|ADH88649.1| tyrosyl-tRNA synthetase [Starkeya novella DSM 506]
          Length = 423

 Score =  525 bits (1354), Expect = e-147,   Method: Composition-based stats.
 Identities = 233/421 (55%), Positives = 303/421 (71%), Gaps = 6/421 (1%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  F+SDFL  L ERGFIHQIS+ + LD L ++  VTAYIG+D TA SLHAG L Q+M+L
Sbjct: 1   MSKFRSDFLRTLDERGFIHQISDEQGLDDLFAKETVTAYIGFDPTAPSLHAGGLIQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            WLQ+TGH+P+SLMGGGT ++GDPSF+DE+R++M    I+ NI  I+ +FS+++ YG   
Sbjct: 61  HWLQQTGHRPVSLMGGGTGMVGDPSFKDEARQLMTVDTIEANIASIRRVFSNYLSYGDSN 120

Query: 121 TD-----ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFN 175
                  ALM+NN  WL  + Y++ LR++G  FSVNRMLSF+SV+ RL+REQSLSFLEFN
Sbjct: 121 HGDSLRGALMINNAEWLRELNYLEFLRDVGRHFSVNRMLSFDSVKMRLEREQSLSFLEFN 180

Query: 176 YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT 235
           YMILQAYDFVEL K Y  RLQMGGSDQWGNI+ GIDLG R+ +P+L+ALTSPLLTTASG 
Sbjct: 181 YMILQAYDFVELNKRYGVRLQMGGSDQWGNIVNGIDLGHRMGSPQLYALTSPLLTTASGA 240

Query: 236 KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI 295
           KMGKTL GA+WLN ++  PY FWQYWRN +DADV  F K  TTLPM+EI R++ L G E+
Sbjct: 241 KMGKTLGGAVWLNADLLGPYEFWQYWRNTEDADVPRFLKLYTTLPMAEIARLSALGGAEL 300

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTL 355
           NE KKI+ATE+T M+HGR  AE AA  A + F+    S  +PT+ +   E+  G+G+L  
Sbjct: 301 NEVKKILATEVTAMLHGRAAAEAAAETARKTFEEGGLSADLPTVEVPAGELEAGIGVLAA 360

Query: 356 IVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
             +  G   S  EARR +K   +K+N++ +++EK  +  +D    G +KLS GKK H++ 
Sbjct: 361 FAEKTGLVASNGEARRQIKGGGLKVNDATVTDEKAVLTARDLTPEGVVKLSLGKKKHVLL 420

Query: 415 H 415
            
Sbjct: 421 R 421


>gi|222148510|ref|YP_002549467.1| tyrosyl-tRNA synthetase [Agrobacterium vitis S4]
 gi|221735496|gb|ACM36459.1| tyrosyl-tRNA synthetase [Agrobacterium vitis S4]
          Length = 418

 Score =  525 bits (1354), Expect = e-147,   Method: Composition-based stats.
 Identities = 246/416 (59%), Positives = 313/416 (75%), Gaps = 1/416 (0%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  FKSDFL  + ERGFIHQIS+   LD L S+  VTAYIGYD TASSLHAG L Q+M+L
Sbjct: 1   MSKFKSDFLRTMHERGFIHQISDETGLDDLLSKETVTAYIGYDPTASSLHAGSLIQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG- 119
            W Q TGH+PISLMGGGT ++GDPSF++E+R++M   +I++NI  IK  F+ ++ Y  G 
Sbjct: 61  HWFQATGHQPISLMGGGTGMVGDPSFKEEARQLMTVDKIEDNIASIKRCFAHYLDYDNGP 120

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
           K  ALMLNN  WL  + Y++ LR++G  FSVNRMLSF+SV++RL REQSLSFLEFNYMIL
Sbjct: 121 KGGALMLNNAEWLRGLNYLEFLRDVGRHFSVNRMLSFDSVKTRLDREQSLSFLEFNYMIL 180

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK 239
           QAYD+VEL K Y CRLQMGGSDQWGNII GIDLG R+ TP+L+ALTSPLLTT+SG KMGK
Sbjct: 181 QAYDYVELNKRYGCRLQMGGSDQWGNIINGIDLGHRMGTPQLYALTSPLLTTSSGAKMGK 240

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAK 299
           + +GA+WLN ++ S Y+FWQYWRN +DADV  F K  TTLPM EI +++ L G EINE K
Sbjct: 241 SATGAVWLNADLLSAYDFWQYWRNTEDADVSRFLKLYTTLPMDEIAKLSALGGAEINEVK 300

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKA 359
           KI+ATEIT ++HGR  AE+AA  A + F+    + ++P+I ++  E+  G+GLL LIVKA
Sbjct: 301 KILATEITAILHGRAAAEEAAETARKTFEEGALADNLPSIEVASAELESGIGLLALIVKA 360

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           G A S  EARRH++  A+KIN+  +S+E++ I   +  + G IKLS GKK HI+  
Sbjct: 361 GLAASNGEARRHVQGGAVKINDQSVSDERMSIGAGEVTADGVIKLSLGKKKHILVR 416


>gi|118590058|ref|ZP_01547462.1| tyrosyl-tRNA synthetase [Stappia aggregata IAM 12614]
 gi|118437555|gb|EAV44192.1| tyrosyl-tRNA synthetase [Stappia aggregata IAM 12614]
          Length = 417

 Score =  525 bits (1354), Expect = e-147,   Method: Composition-based stats.
 Identities = 230/415 (55%), Positives = 302/415 (72%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  FKSDFL++LSERGFIHQIS+P+ LD LC++  VTAYIG+D TA SLHAG L  +M+L
Sbjct: 1   MSEFKSDFLNVLSERGFIHQISDPKGLDALCAKETVTAYIGFDCTAPSLHAGSLVPIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            W QKTGH+PI+LMGGGT+ +GDPS +DESR+++    I+EN   I+ +F   + +G G 
Sbjct: 61  HWFQKTGHRPIALMGGGTTRVGDPSGKDESRKILTEDVIEENKAGIRKVFEKLLTFGEGP 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           TDA+ML+N  WL  + Y+D LR+IG  FSVN+M+  +SVR RL+REQ LSFLEFNYM+LQ
Sbjct: 121 TDAIMLDNADWLLKLNYVDFLRDIGRHFSVNQMIQRDSVRLRLEREQHLSFLEFNYMLLQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
            YD++EL +   CRLQMGGSDQWGNI+ G DL  RL   + FALTSPLLTT+SG KMGKT
Sbjct: 181 GYDYLELYRRTGCRLQMGGSDQWGNILSGTDLVRRLADVEAFALTSPLLTTSSGAKMGKT 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
            +GA+WLN+E  S Y++WQYWRN +DADV  F K  T LPM EI R+A L+G EINEAKK
Sbjct: 241 AAGAVWLNEEQLSAYDYWQYWRNTEDADVERFMKLFTVLPMDEIARLAALRGSEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+ATE T ++HGRE AE AA  A + F+    ++ +PT+ I+K ++  G+G+L+  V AG
Sbjct: 301 ILATEATALIHGRENAEAAAETARKAFEEGQSAEGLPTVEIAKADLEAGLGVLSAFVTAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
              S  + RR++K  A+KIN+    ++K QI L D  + G +KLS GKK H++  
Sbjct: 361 LCASNGDVRRNIKGGAVKINDKGEQDDKRQITLADVTADGIVKLSLGKKKHVLLK 415


>gi|148255351|ref|YP_001239936.1| tyrosyl-tRNA synthetase [Bradyrhizobium sp. BTAi1]
 gi|146407524|gb|ABQ36030.1| tyrosyl-tRNA synthetase [Bradyrhizobium sp. BTAi1]
          Length = 417

 Score =  525 bits (1354), Expect = e-147,   Method: Composition-based stats.
 Identities = 223/415 (53%), Positives = 305/415 (73%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  FKSDFL++L  RGFIHQ S+   LD L ++G  TAY+GYD TA SLH G+   +M+L
Sbjct: 1   MTGFKSDFLNVLQSRGFIHQCSDFEGLDALAAKGQATAYVGYDCTARSLHIGNFLTMMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
           +WLQ+TG+KPI+LMGGGT+++GDPS +DE+R M   +EI+ N   I+G+F+  + YG G 
Sbjct: 61  YWLQQTGNKPITLMGGGTTMVGDPSGKDETRAMRTVEEIEANKASIRGVFAKVLAYGDGA 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           TDA+ML+N  WL  + +I++LR+IG  FSVNRML+ +SVR RL+REQ +SF+EFNYM+ Q
Sbjct: 121 TDAIMLDNAEWLTKLNWIEMLRDIGRHFSVNRMLTMDSVRLRLEREQEMSFIEFNYMVCQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVEL++   CRLQMGGSDQWGNI+ G++LG R+ T +LFALT+PLLTTASG KMGKT
Sbjct: 181 AYDFVELSRRTGCRLQMGGSDQWGNIVNGVELGRRMGTEQLFALTTPLLTTASGAKMGKT 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
             GAIWLN +  SPY+FWQYWRN +DADVV F K  TTLP+SEI+++  LQG EINEAKK
Sbjct: 241 AQGAIWLNADQCSPYDFWQYWRNTEDADVVKFLKLFTTLPLSEIEKLGALQGAEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
            +A   TT++HG E A  AA  A   F+    ++++PT+ +++ E+  G+G+L   VKAG
Sbjct: 301 ALADAATTLLHGEEAARTAAETARRTFEEGAIAENLPTVEVAQAELDAGLGVLNAFVKAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
              S  EARR +K   +++N+  +++EK+ +  ++  + G IKLS GKK H++  
Sbjct: 361 LVASNGEARRQIKGGGLRVNDVAVTDEKMALTAKELTAEGVIKLSLGKKRHVLVK 415


>gi|307941925|ref|ZP_07657278.1| tyrosyl-tRNA synthetase [Roseibium sp. TrichSKD4]
 gi|307774831|gb|EFO34039.1| tyrosyl-tRNA synthetase [Roseibium sp. TrichSKD4]
          Length = 417

 Score =  525 bits (1353), Expect = e-147,   Method: Composition-based stats.
 Identities = 224/415 (53%), Positives = 297/415 (71%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  FKS+++ +LSERG+IHQ+S+P+ LD LC++  VTAYIG+D TA SLH G L Q+M+L
Sbjct: 1   MSEFKSEYMQVLSERGYIHQVSDPKGLDELCAKESVTAYIGFDCTAPSLHVGSLVQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            W QKTGH+PI+LMGGGT+ +GDPS +DESR+++   +I+ N   IK +F   + +G G 
Sbjct: 61  HWFQKTGHRPIALMGGGTTRVGDPSGKDESRKILTPDDIEANKAGIKQVFEKLLTFGDGP 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
            DA+M++N  WL S+ Y+D LREIG  FSVN+M+  +SVR RL+REQ LSFLEFNYM+LQ
Sbjct: 121 QDAVMVDNADWLLSLNYVDFLREIGRHFSVNQMIQRDSVRLRLEREQHLSFLEFNYMLLQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
            YD++EL +   CRLQMGGSDQWGNI+ G DL  RL+  + FALTSPLLTTASG KMGKT
Sbjct: 181 GYDYLELYRRTGCRLQMGGSDQWGNILSGTDLVRRLEGVESFALTSPLLTTASGAKMGKT 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
             GA+WLN++  S Y++WQYWRN +DADV  F K  T LPM EI R+A L+G EINEAKK
Sbjct: 241 ADGAVWLNEDQLSAYDYWQYWRNTEDADVERFLKLFTLLPMDEIARLAALEGSEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           ++ATE T ++HGRE A+ AA  A + F+    +  +PTI I+K ++  G+G+LT  V AG
Sbjct: 301 VLATEATALLHGREAADAAAETARKAFEEGQSAAGLPTIEIAKSDLEAGLGILTAFVTAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
              S  E RR++K  A+KIN+   S+ +  I   D    G +KLS GKK H++  
Sbjct: 361 LCASNGEVRRNIKGGAVKINDKGESSHERSITPADITEDGIVKLSLGKKKHVLLK 415


>gi|300023869|ref|YP_003756480.1| tyrosyl-tRNA synthetase [Hyphomicrobium denitrificans ATCC 51888]
 gi|299525690|gb|ADJ24159.1| tyrosyl-tRNA synthetase [Hyphomicrobium denitrificans ATCC 51888]
          Length = 418

 Score =  525 bits (1352), Expect = e-147,   Method: Composition-based stats.
 Identities = 228/416 (54%), Positives = 296/416 (71%), Gaps = 1/416 (0%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           MP  KS+FL I++ERGFIHQ S+   LD   S+G + AY GYD TA SLH GHL  +M+L
Sbjct: 1   MPTLKSEFLQIMTERGFIHQCSDLDGLDKAGSEGRIVAYAGYDCTAPSLHVGHLISIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            WLQKTG KPI+LMGGGT+ +GDPS +DE+R++   +EI  N E IK +FS+F+ +G+ K
Sbjct: 61  SWLQKTGGKPIALMGGGTTRVGDPSGKDETRQIRTVEEIDANKESIKRVFSNFLTFGSAK 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           +DALM++N  WL  + YI+ LR++G  FSVNRML+ +S + RL REQ LSF+EFNYM+LQ
Sbjct: 121 SDALMVDNAEWLAPLNYIEFLRDVGRHFSVNRMLTMDSAKLRLDREQELSFIEFNYMLLQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKL-FALTSPLLTTASGTKMGK 239
           +YDFVEL + Y C LQMGGSDQWGNI+ GIDLG R+   +  F LT PLLTT+SG KMGK
Sbjct: 181 SYDFVELNRRYGCNLQMGGSDQWGNIVTGIDLGRRMGVKEQLFGLTCPLLTTSSGAKMGK 240

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAK 299
           T SGA+WLN+   S Y++WQ+WRN +DADV  F K  T LP+ EI R++ L G EINEAK
Sbjct: 241 TASGAVWLNEAQLSAYDYWQFWRNTEDADVARFLKLFTMLPLDEIARLSSLGGAEINEAK 300

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKA 359
           K +ATE T +VHGRE+AE AA  A + F+    +  +PTI IS  E   G+G+LT  VKA
Sbjct: 301 KTLATEATALVHGREKAEAAAETARKTFEQGALATDLPTIEISSAEFDAGLGVLTAFVKA 360

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           G   S +EARR ++   +KIN+  ++++K  IK  D  S G IKLS GKK H++  
Sbjct: 361 GLVASNSEARRQIQGGGLKINDEAVTSDKAVIKATDAVSNGVIKLSLGKKKHVLLK 416


>gi|163746477|ref|ZP_02153835.1| tyrosyl-tRNA synthetase, putative [Oceanibulbus indolifex HEL-45]
 gi|161380362|gb|EDQ04773.1| tyrosyl-tRNA synthetase, putative [Oceanibulbus indolifex HEL-45]
          Length = 416

 Score =  524 bits (1351), Expect = e-147,   Method: Composition-based stats.
 Identities = 207/412 (50%), Positives = 280/412 (67%), Gaps = 2/412 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KS+F+  + +RGF+   ++ + LD    +G   AY+GYD TA SLH GHL  +M+L WLQ
Sbjct: 6   KSEFIHTMMQRGFLADCTDYQGLDEALMKGAAPAYVGYDATAKSLHVGHLVNIMMLRWLQ 65

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           K G KPI+LMGGGT+ +GDPSFR + R ++  + I +NIE I+ +F+ ++ YG   +DAL
Sbjct: 66  KFGGKPITLMGGGTTKVGDPSFRSDERPLLTPEAIDDNIEGIRQVFARYLDYGDRPSDAL 125

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           MLNN  WL ++ Y+D LR+IG  FS+NRMLSFESV+SRL REQSLSFLEFNYMILQAYDF
Sbjct: 126 MLNNAEWLDNLNYLDFLRDIGRHFSINRMLSFESVKSRLDREQSLSFLEFNYMILQAYDF 185

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL + Y C LQMGGSDQWGNI+ GIDL  R+   +++ LTSPLLTT+ G KMGK+  GA
Sbjct: 186 MELHRRYGCVLQMGGSDQWGNIVNGIDLTRRVIDGEVYGLTSPLLTTSDGKKMGKSAGGA 245

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WLN +M SPY FWQ+WRN  DADV  F K  T LP+ E DR+  L G EINEAK  +A 
Sbjct: 246 VWLNGDMLSPYEFWQFWRNCTDADVGRFLKLYTELPVDECDRLGALAGSEINEAKVRLAN 305

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E+T ++HG E A  A   A E F+       +PT+++S  +V  G+ ++ L+VK+G A S
Sbjct: 306 EVTGLLHGEEAARNAEATAREVFEKGGVGDDLPTLTLSAADVGDGVSIVQLLVKSGLAGS 365

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             EA+R +  N  +I++  +++  + +      S   IKLS GKK H +  +
Sbjct: 366 GKEAKRLIAENGARIDDQPLTDAGMMLDAGALSSP--IKLSAGKKRHALVQI 415


>gi|83951809|ref|ZP_00960541.1| tyrosyl-tRNA synthetase [Roseovarius nubinhibens ISM]
 gi|83836815|gb|EAP76112.1| tyrosyl-tRNA synthetase [Roseovarius nubinhibens ISM]
          Length = 417

 Score =  524 bits (1350), Expect = e-146,   Method: Composition-based stats.
 Identities = 214/412 (51%), Positives = 285/412 (69%), Gaps = 2/412 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KS+F+SI+  RGF+   ++ + LD     GVV +YIGYD TA SLH GHL  +M+L WLQ
Sbjct: 6   KSEFISIMISRGFLADCTDYQGLDEAMQAGVVPSYIGYDATAQSLHVGHLLNIMMLRWLQ 65

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           K+GHKPI+LMGGGT+ +GDPSFR + R ++  ++I  NI  +  +FS ++ YG G+TDA+
Sbjct: 66  KSGHKPITLMGGGTTKVGDPSFRSDERPLLGPEQIDANIRGMGQVFSRYLSYGEGETDAI 125

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           MLNN  WL  + Y++ LR+IG  FSVNRMLSFESV+SRL REQSLSFLEFNYMILQAYDF
Sbjct: 126 MLNNAEWLDDLNYLEFLRDIGRHFSVNRMLSFESVKSRLDREQSLSFLEFNYMILQAYDF 185

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL + Y C LQMGGSDQWGNI+ GIDL  R+   +++ LTSPLLTT+ G KMGK+  GA
Sbjct: 186 LELNRRYGCLLQMGGSDQWGNIVNGIDLTRRVIDHEVYGLTSPLLTTSDGRKMGKSQGGA 245

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           IWLN +M SPY FWQ+WRN  DAD   F K  T LP+ E DR+  L G EINEAK I+A 
Sbjct: 246 IWLNGDMLSPYEFWQFWRNTTDADTGRFLKLYTELPVEECDRLGALAGSEINEAKIILAN 305

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E+T ++HG E A+ A   A E F+       +PT+++S  E+  G+ ++ L+VK G A S
Sbjct: 306 EVTALLHGAEAAQAAQDTAREVFEKGGVGDDLPTVTLSPAEIEGGISVVQLLVKTGLAKS 365

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             EA+R +  N  +++++ +++  L +    F +   IKLS GKK H +  L
Sbjct: 366 GKEAKRLISENGARLDDAPLTDAGLMLDSGAFAAP--IKLSAGKKRHALVKL 415


>gi|138896346|ref|YP_001126799.1| tyrosyl-tRNA synthetase [Geobacillus thermodenitrificans NG80-2]
 gi|196249972|ref|ZP_03148667.1| tyrosyl-tRNA synthetase [Geobacillus sp. G11MC16]
 gi|134267859|gb|ABO68054.1| Tyrosyl-tRNA synthetase [Geobacillus thermodenitrificans NG80-2]
 gi|196210486|gb|EDY05250.1| tyrosyl-tRNA synthetase [Geobacillus sp. G11MC16]
          Length = 419

 Score =  524 bits (1350), Expect = e-146,   Method: Composition-based stats.
 Identities = 159/420 (37%), Positives = 228/420 (54%), Gaps = 11/420 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + L  L  RG ++Q ++   L  L ++  VT Y G+D TA SLH GHL  +M L   Q+ 
Sbjct: 2   NLLEELQWRGLVNQTTDEDGLRKLLNEEKVTLYCGFDPTADSLHIGHLVTIMTLRRFQQA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI+L+GG T +IGDPS R   R +   + ++    +IK     F+ +      A + 
Sbjct: 62  GHQPIALVGGATGLIGDPSGRKSERTLNAKETVETWSARIKAQLERFLDFEAESNPAKIK 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W+  +  I  LR+IG  FSVN ML+ ESV+SR+  E  +SF EF+YM+LQAYDF+ 
Sbjct: 122 NNYDWIGPLDVISFLRDIGKHFSVNYMLAKESVQSRI--EMGISFTEFSYMMLQAYDFLN 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGER-LKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           L +   CRLQ+GGSDQWGNI  G++L  R     K F LT PL+T A GTK GKT SGA+
Sbjct: 180 LYETEGCRLQIGGSDQWGNITAGLELIRRTKGEAKAFGLTVPLVTKADGTKFGKTESGAV 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIA 303
           WL+ E TSPY F+Q+W N DD DV+ + K  T L   EID + +   +  E   A+K +A
Sbjct: 240 WLDPEKTSPYEFYQFWINTDDRDVIRYLKYFTFLTKEEIDALEQELREAPEKRVAQKTLA 299

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS-----ISKDEVSRG-MGLLTLIV 357
           +E+T +VHG E   +A   +   F   I       I      +       G + L+ L+V
Sbjct: 300 SEVTKLVHGEEALNQAIRISEALFSGDIAELTAAEIEQGFKNVPSFVHEGGDVPLVELLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            AG + S  +AR  +++ AI +N   I +    +  +         +  GKK + +    
Sbjct: 360 AAGISPSKRQAREDVQNGAIYVNGERIQDVGAVLTAEHRLEGRFTVIRRGKKKYYLIRYA 419


>gi|153953394|ref|YP_001394159.1| tyrosyl-tRNA synthetase [Clostridium kluyveri DSM 555]
 gi|219854023|ref|YP_002471145.1| hypothetical protein CKR_0680 [Clostridium kluyveri NBRC 12016]
 gi|254783590|sp|B9DZQ6|SYY_CLOK1 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|254783591|sp|A5N680|SYY_CLOK5 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|146346275|gb|EDK32811.1| TyrS1 [Clostridium kluyveri DSM 555]
 gi|219567747|dbj|BAH05731.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 406

 Score =  523 bits (1349), Expect = e-146,   Method: Composition-based stats.
 Identities = 185/406 (45%), Positives = 265/406 (65%), Gaps = 7/406 (1%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           ++   IL ERG+I QI++  E+  L  +  VT YIG+D TA SLH GH  Q+M++  +QK
Sbjct: 2   ANVYDILLERGYIKQITHEDEVRELLGKEKVTFYIGFDPTADSLHIGHFLQMMVMSHMQK 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKPI+L+GGGT++IGDP+ + + R+M+  ++IQ N +  K  FS FI +   K  A+M
Sbjct: 62  AGHKPIALLGGGTAMIGDPTGKTDMRKMLSREQIQHNADCFKKQFSKFIDFEDEK--AIM 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
            NN  WL ++ Y++ LREIG  FSVN+ML+ E  + R+  E+ L+FLEFNYM++Q YDF+
Sbjct: 120 ANNADWLMNLNYVNFLREIGVHFSVNKMLTAECFKQRM--EKGLTFLEFNYMLMQGYDFL 177

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           EL + Y C  QMGG DQW NII G++L  + +    F +T  LLT + G KMGKT  GAI
Sbjct: 178 ELNRRYGCTFQMGGDDQWANIIAGVNLIRKKERKPAFGMTFTLLTKSDGKKMGKTEGGAI 237

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
           WL+KE TSPY+F+QYWRN+DDADV      LT LPM E+ R++ L G++INEAKK++A E
Sbjct: 238 WLDKEKTSPYDFYQYWRNVDDADVEKCLLLLTFLPMDEVKRLSSLPGEKINEAKKVLAYE 297

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           +T ++HG +EA+ A  AA   F       ++PTI +  DE S G  ++ L+V      S 
Sbjct: 298 VTKIIHGEKEAQMAKEAAEALFSGGESLNNVPTIEL--DESSLGCSVVELLVDIHILPSK 355

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           +EARR +K N + IN   +++ +L++    F   G + +  GKKN+
Sbjct: 356 SEARRLIKQNGLTINGEKVTDSELKVTKDHF-KNGELLIRRGKKNY 400


>gi|163759545|ref|ZP_02166630.1| tyrosyl-tRNA synthetase [Hoeflea phototrophica DFL-43]
 gi|162283142|gb|EDQ33428.1| tyrosyl-tRNA synthetase [Hoeflea phototrophica DFL-43]
          Length = 417

 Score =  523 bits (1349), Expect = e-146,   Method: Composition-based stats.
 Identities = 231/415 (55%), Positives = 307/415 (73%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M A+KSDFL+IL+ERGFIHQ S+   LD L S+G    YIGYD TA SLH G+   +M+L
Sbjct: 1   MSAYKSDFLNILNERGFIHQCSDFEGLDTLASKGEAVGYIGYDCTAPSLHIGNYLTMMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
           +WLQ++G+KPI+LMGGGT+++GDPS +DE+R++   +EI  N + IK +FS  + +G G 
Sbjct: 61  YWLQQSGNKPIALMGGGTTMVGDPSGKDETRQLRTVEEIGANKDSIKQVFSRVLNFGDGA 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
            DA+M++N  WL  + YID+LR++G  FSVNRMLS +SVR RL+REQ +SF+EFNYM+ Q
Sbjct: 121 HDAIMVDNADWLLKLSYIDMLRDVGRHFSVNRMLSMDSVRLRLEREQEMSFIEFNYMVCQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           +YD+VELA+ Y C LQMGGSDQWGNI+ G++LG R+ T +L+ALT+PLLTTASG KMGKT
Sbjct: 181 SYDYVELARRYGCNLQMGGSDQWGNIVNGVELGRRMGTHQLYALTTPLLTTASGEKMGKT 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
            +GA+WLN +M S ++FWQYWRN +DADV  F KR T LPM EI R+  LQG EINEAKK
Sbjct: 241 ANGAVWLNADMFSAWDFWQYWRNAEDADVGRFLKRFTILPMDEIRRLEALQGAEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           ++A E T ++HGR  AE+AA  A + F+    S ++PTISI  DE+  G+GLL L V+AG
Sbjct: 301 VLANEATALLHGRAAAEEAAETARKTFEEGAISDNLPTISIPSDELQSGVGLLALFVRAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            A S  EARRH++  AIK+N+  IS++K  +     +  G IKLS GKK H++  
Sbjct: 361 LAGSNGEARRHVQGGAIKLNDVAISDDKTLVNSGYLNDDGVIKLSLGKKKHVLVR 415


>gi|227822086|ref|YP_002826057.1| tyrosyl-tRNA synthetase [Sinorhizobium fredii NGR234]
 gi|227341086|gb|ACP25304.1| tyrosyl-tRNA synthetase [Sinorhizobium fredii NGR234]
          Length = 417

 Score =  523 bits (1348), Expect = e-146,   Method: Composition-based stats.
 Identities = 248/415 (59%), Positives = 308/415 (74%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  FKSDFL  L ERGFI Q S+   LD L  +  VTAYIG+D TA SLHAG L Q+M+L
Sbjct: 1   MSEFKSDFLRTLHERGFIQQTSDDTGLDELFRKETVTAYIGFDPTAPSLHAGGLIQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            WLQ TGH+ ISLMGGGT ++GDPSF+DE+R++M  + I  NI  IK +FS+++ YG G 
Sbjct: 61  HWLQATGHRAISLMGGGTGMVGDPSFKDEARQLMTPETIAANIASIKTVFSNYLSYGEGP 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
            DALM+NN  WL  I Y++ LR++G  FSVNRMLSF+SV++RL REQSLSFLEFNYMILQ
Sbjct: 121 RDALMINNADWLLGINYLEFLRDVGRHFSVNRMLSFDSVKTRLDREQSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVEL K YDCRLQMGGSDQWGNII GIDLG R+ TP+L+ALTSPLLTTASG KMGK+
Sbjct: 181 AYDFVELNKRYDCRLQMGGSDQWGNIINGIDLGHRMGTPQLYALTSPLLTTASGAKMGKS 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           ++GAIWLN +M   Y+FWQYWRN +DADV  F K  TTLPM EI+R++KL G EINE KK
Sbjct: 241 VNGAIWLNPDMLGTYDFWQYWRNTEDADVTRFLKLYTTLPMPEIERLSKLGGSEINEVKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+ATEIT  +HGR  AE AA  A + F+    ++ +P+I +   E+  G+GLLTL+V+AG
Sbjct: 301 ILATEITATLHGRAAAENAAETARKTFEEGALAEDLPSIEVPAPELETGLGLLTLVVRAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            A S  EARRH++   ++IN+  I++E+  +   D    G IKLS GKK HI+  
Sbjct: 361 LAASNGEARRHVQGGGVRINDEQINDERRVVGSADVTGDGVIKLSLGKKKHILVR 415


>gi|160934286|ref|ZP_02081673.1| hypothetical protein CLOLEP_03157 [Clostridium leptum DSM 753]
 gi|156866959|gb|EDO60331.1| hypothetical protein CLOLEP_03157 [Clostridium leptum DSM 753]
          Length = 413

 Score =  523 bits (1348), Expect = e-146,   Method: Composition-based stats.
 Identities = 180/412 (43%), Positives = 258/412 (62%), Gaps = 6/412 (1%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M          L  RG I Q++N  ++  L + G  + YIG+D TA SLH GH  Q+M++
Sbjct: 1   MEELIMGVYDELKARGLIAQLTNEEKVRDLLNNGKTSFYIGFDPTADSLHVGHFVQIMVM 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             +QK GH PI+L GGGT +IGDPS +   RRMM  +EI  N+   +   S  + +  GK
Sbjct: 61  AHMQKAGHTPIALFGGGTGMIGDPSGKTAMRRMMTREEIDHNVRCFQKQMSRLVDFSDGK 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
             A+M+NN  WL ++ YI  LRE+G  FSVNRMLSFE  + RL+R   LSF E NYM++Q
Sbjct: 121 --AIMVNNADWLMNLNYIQFLREVGVHFSVNRMLSFECYKQRLER--GLSFFELNYMLMQ 176

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           +YDF+ L + Y C+L++GG DQW NII G++L  +    + + +T  LLTT+ G KMGKT
Sbjct: 177 SYDFLVLNRKYGCQLELGGDDQWSNIIGGVELIRKADDKEAYGMTFTLLTTSDGRKMGKT 236

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
            SGA+WL+ E TSPY+F+QYWRN+DDADV+   K LT LP+ EI+ MAK +G ++N+AK+
Sbjct: 237 ESGAVWLDPEKTSPYDFYQYWRNVDDADVIRCLKILTFLPLEEIEAMAKWEGSQLNKAKE 296

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKA 359
           I+A E+T ++HG EEA KA  AA   F    HS++MP+  +S  + + G + +L L+ K 
Sbjct: 297 ILAFEVTKLIHGEEEAVKAQNAARAIFGGGAHSENMPSTELSDGDFTDGEISVLDLLAKT 356

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
               S  EARR +    I I++  +++   +I    F+  G + +  GKK +
Sbjct: 357 KLVPSKGEARRLIDQGGISIDDEKVNSVTAKISKSSFEK-GFVIIKKGKKVY 407


>gi|182677022|ref|YP_001831168.1| tyrosyl-tRNA synthetase [Beijerinckia indica subsp. indica ATCC
           9039]
 gi|254783567|sp|B2IAX9|SYY_BEII9 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|182632905|gb|ACB93679.1| tyrosyl-tRNA synthetase [Beijerinckia indica subsp. indica ATCC
           9039]
          Length = 421

 Score =  523 bits (1348), Expect = e-146,   Method: Composition-based stats.
 Identities = 225/413 (54%), Positives = 298/413 (72%), Gaps = 3/413 (0%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           SDFL+IL+ERGF+HQ S+P  LD     G + AYIG+D TA SLH G L Q+M+L WLQK
Sbjct: 9   SDFLAILTERGFLHQCSDPAGLDEKAKSGGLIAYIGFDCTAPSLHVGSLVQIMMLRWLQK 68

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
           TG KPI LMGGGT+ +GDPS +DESR+++  +EI+ N + IK +FS F+ +G GKTDALM
Sbjct: 69  TGGKPIVLMGGGTTRVGDPSGKDESRKILTLEEIEANKQGIKQVFSKFVHFGEGKTDALM 128

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
            +N  WL ++ YID LR++G  FSVNRMLS +SV+ RL+R+Q LSFLEFNYM  QAYDFV
Sbjct: 129 ADNAEWLTALHYIDFLRDVGRHFSVNRMLSMDSVKLRLERDQELSFLEFNYMCCQAYDFV 188

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           EL K Y C+LQMGGSDQWGNI+ GIDLG R+ T +L+ALTSPLLTTASG KMGKT  GA+
Sbjct: 189 ELHKRYGCQLQMGGSDQWGNIVTGIDLGRRMGTAQLYALTSPLLTTASGAKMGKTAKGAV 248

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
           WL++ M   +++WQ+WRN +D DV  F K  T LP+ EI R+  LQ  EINEAKKI+ATE
Sbjct: 249 WLDEAMLPVFDYWQFWRNCEDRDVGRFLKLFTELPLDEIARLEALQDAEINEAKKILATE 308

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVS-RGMGLLTLIVKAGFATS 364
            T MVHGRE AE+AA  A + F+  + +  +P++ +  +E+   G+G+L    KAG   S
Sbjct: 309 ATAMVHGREAAERAADTARQTFEEGVVAASLPSVILQTNEIPAEGLGILAAFAKAGLVNS 368

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           T+EARR +K   +++N+  I++EK  I ++  ++    KLS G+K H++  L 
Sbjct: 369 TSEARRQIKGGGLRLNDQPITDEKAVITIEAIEAGA--KLSLGRKKHVLLRLA 419


>gi|222086109|ref|YP_002544641.1| tyrosyl-tRNA synthetase [Agrobacterium radiobacter K84]
 gi|221723557|gb|ACM26713.1| tyrosyl-tRNA synthetase [Agrobacterium radiobacter K84]
          Length = 410

 Score =  522 bits (1346), Expect = e-146,   Method: Composition-based stats.
 Identities = 238/407 (58%), Positives = 308/407 (75%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           +  L ERGFIHQIS+   LD L ++  VTAYIG+D TA SLH G L Q+M+L WLQ TGH
Sbjct: 1   MRTLQERGFIHQISDEAGLDDLFAKETVTAYIGFDPTAPSLHVGSLMQIMMLHWLQATGH 60

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           + +SLMGGGT ++GDPSF+DE+R++M    I+ NI  IK +FSS++ YG G  DALM+NN
Sbjct: 61  RAVSLMGGGTGMVGDPSFKDEARQLMTVDTIESNIASIKRVFSSYLTYGDGPKDALMINN 120

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL S+ Y++ LR++G  FSVNRMLSF+SV++RL REQSLSFLEFNYMILQAYDFVELA
Sbjct: 121 AEWLRSLNYLEFLRDVGRHFSVNRMLSFDSVKTRLDREQSLSFLEFNYMILQAYDFVELA 180

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
           K YDCRLQ+GGSDQWGNI+ GIDLG R+ T +L+ALTSPLLTT+SG KMGK+ SGA+WLN
Sbjct: 181 KRYDCRLQIGGSDQWGNIVNGIDLGHRMGTKQLYALTSPLLTTSSGAKMGKSASGAVWLN 240

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITT 308
            ++ S Y+FWQYWRN +DADV  F K  TTLPM EI R++ L G E+NE KKI+ATE+T 
Sbjct: 241 SDLLSAYDFWQYWRNTEDADVSRFLKLYTTLPMDEIARLSALAGSELNEVKKILATEVTA 300

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
           ++HGRE AE AA  A + F+    S+++P++ +   E+  G+GLL+LIV+AG A S  EA
Sbjct: 301 ILHGREAAELAAETARKTFEEGGLSENLPSVEVPASELDAGIGLLSLIVRAGLAASNGEA 360

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           RRH++  A++IN+  +S+E+  I   +  + G IKLS GKK HI+  
Sbjct: 361 RRHVQGGAVRINDQAVSDERKLIGSGEITADGVIKLSLGKKKHILVR 407


>gi|170768726|ref|ZP_02903179.1| tyrosyl-tRNA synthetase [Escherichia albertii TW07627]
 gi|170122274|gb|EDS91205.1| tyrosyl-tRNA synthetase [Escherichia albertii TW07627]
          Length = 424

 Score =  522 bits (1345), Expect = e-146,   Method: Composition-based stats.
 Identities = 161/419 (38%), Positives = 239/419 (57%), Gaps = 11/419 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 4   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +QE ++KI+   + F+ +  G+  A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDCGENSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDF 184
            NN  W  ++  +  LR+IG  FSVN+M++ E+V+ RL RE Q +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNREDQGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K Y   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 184 ACLNKQYGVTLQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI   +   K  GK    A+ +
Sbjct: 244 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINALEEEDKNSGKAPR-AQYV 302

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTL 355
           +A ++T +VHG E  + A       F  S+ +      + +    +   E+ +G  L+  
Sbjct: 303 LAEQVTRLVHGEEGLQAAKRITECLFSGSLSALSEADFEQLAQDGVPMVEMEKGADLMQA 362

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +V +    S  +AR+ + SNAI IN    ++ +   K +D        L  GKKN+ + 
Sbjct: 363 LVDSELQPSRGQARKTIASNAITINGEKQTDPEYFFKEEDRLFGRYTLLRRGKKNYCLI 421


>gi|169335722|ref|ZP_02862915.1| hypothetical protein ANASTE_02142 [Anaerofustis stercorihominis DSM
           17244]
 gi|169258460|gb|EDS72426.1| hypothetical protein ANASTE_02142 [Anaerofustis stercorihominis DSM
           17244]
          Length = 407

 Score =  522 bits (1344), Expect = e-146,   Method: Composition-based stats.
 Identities = 185/410 (45%), Positives = 260/410 (63%), Gaps = 5/410 (1%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L +RG I Q+++  E+  L + G  T YIG+D TA SLH GH   L L+  LQ  G
Sbjct: 3   VYEELVKRGLIAQVTDEEEIKELINNGKATFYIGFDPTADSLHVGHFMALCLMKRLQMAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           +KPI+L+GGGT +IGDPS R + R+MM  + I EN E+ K   S FI +  GK  ALM+N
Sbjct: 63  NKPIALVGGGTGMIGDPSGRTDLRQMMTVETINENCERFKEQMSRFIDFSDGK--ALMVN 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  + YID +R+IGS FSVNRML+FE  + R+  E+ LSFLEFNYMI+Q+YDF  L
Sbjct: 121 NADWLRDLNYIDFIRDIGSHFSVNRMLTFECYKQRM--EKGLSFLEFNYMIMQSYDFYRL 178

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            K+Y C +Q GG DQW N++ G +L  R      +A+T  LL  + G KMGKT SGA+WL
Sbjct: 179 YKDYGCNMQFGGDDQWSNMLGGTELIRRKLGKDAYAMTITLLLNSEGKKMGKTASGAVWL 238

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           +   TSP++F+QYWRN+ D DV+   K LT LP+ EI++M K +G E+N+AK+I+A E+T
Sbjct: 239 DPNKTSPFDFYQYWRNVGDEDVIKCLKMLTFLPLEEIEKMEKWEGSELNKAKEILAYELT 298

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
            +VHG +EA+KA  AA   F      ++MP+  I K E++ G+ LL L++KA    S +E
Sbjct: 299 ELVHGEDEADKAKEAASALFKGKGSKENMPSTDIEKSEINDGISLLDLMLKAELIPSKSE 358

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            RR +K   + +++  I++    I L+DF     I +  GKK +   ++ 
Sbjct: 359 GRRLVKQGGVSVDDIKITDVNKMITLEDF-KENEIIIKKGKKVYHKINIV 407


>gi|170758393|ref|YP_001788639.1| tyrosyl-tRNA synthetase [Clostridium botulinum A3 str. Loch Maree]
 gi|254783589|sp|B1L203|SYY_CLOBM RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|169405382|gb|ACA53793.1| tyrosine--tRNA ligase [Clostridium botulinum A3 str. Loch Maree]
          Length = 407

 Score =  520 bits (1341), Expect = e-145,   Method: Composition-based stats.
 Identities = 178/407 (43%), Positives = 265/407 (65%), Gaps = 8/407 (1%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+   IL ERG+I Q+++  E+  L  +  ++ YIG+D TA SLH GH  Q+M++  +QK
Sbjct: 2   SNVYDILKERGYIKQLTHEEEIRELLGKEKISFYIGFDPTADSLHVGHFLQMMVMAHMQK 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+PI+L+GGGT +IGDP+ + + R+MM  ++I+ N    K   +  I +   K  A+M
Sbjct: 62  AGHRPIALVGGGTGMIGDPTGKTDMRKMMTKEQIEYNCNCFKKQLAKIIDFSEDK--AIM 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  WL ++ YI+ LREIG  FSVN+ML+ E  +SRL  E+ LSFLEFNYM++Q YDF+
Sbjct: 120 VNNADWLLNLNYIEFLREIGVHFSVNKMLTAECFKSRL--EKGLSFLEFNYMLMQGYDFL 177

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           EL + Y+C +++GG DQW NI+ G+DL  R ++   + +T  LLT + G KMGKT SGA+
Sbjct: 178 ELNRKYNCVMELGGDDQWSNILAGVDLIRRKESKSAYGMTFTLLTNSEGKKMGKTESGAL 237

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
           WL+ E TSPY F+QYWRN+ DADV    + +T LPM E+ R++ L+G EINEAK+++A E
Sbjct: 238 WLDPEKTSPYEFYQYWRNVADADVEKCLRLITFLPMDEVRRLSSLEGAEINEAKRVLAFE 297

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHS-QHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           +T ++HG EEA+KA  AA   F  ++    +MPT  I KD+++    L+ L+ K     S
Sbjct: 298 VTKLIHGEEEAQKAKVAAEALFGGNVKDLGNMPTAYIDKDDLNN--SLVDLLAKCEILPS 355

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
            +EARR +K   + +N+  +++  L +  +     G I +  GKKN 
Sbjct: 356 KSEARRLIKQGGLYVNDEKVTDINLVLTEEHVTEDG-IMIRRGKKNF 401


>gi|97201278|sp|Q891D3|SYY_CLOTE RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
          Length = 407

 Score =  520 bits (1340), Expect = e-145,   Method: Composition-based stats.
 Identities = 174/406 (42%), Positives = 268/406 (66%), Gaps = 7/406 (1%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           ++   +L ERG+I Q ++  E+  L ++  +T YIG+D TA SLH GH   LM++  +QK
Sbjct: 3   NNVFDVLKERGYIKQTTHEEEIRDLINKDKITFYIGFDPTADSLHIGHFLPLMMMAHMQK 62

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+PI+L+GGGT  IGDPS + E R+M+  + I +N+  IK   S FI +   K  A++
Sbjct: 63  AGHRPIALVGGGTVRIGDPSGKSEMRKMLSKEAIDKNVSSIKSQISRFIDFSDDK--AIL 120

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           ++N  WL ++ Y++ +REIG  FSVN+ML+ E  + RL  E+ LSFLEFNYM++QAYDF+
Sbjct: 121 VDNADWLLNLNYLEFIREIGVHFSVNKMLTAECFKQRL--EKGLSFLEFNYMLMQAYDFL 178

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L + Y C +++GG DQW N++ G DL  R ++   +A+T  LLT + G KMGKT++GA+
Sbjct: 179 CLNRKYGCVMELGGDDQWSNMLAGTDLIRREESKSAYAMTCTLLTNSEGNKMGKTVNGAL 238

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
           WL+K+ TSPY F+QYWRN+DDADV      LT LPM E+ R+A L+G +INEAKK++A E
Sbjct: 239 WLDKDKTSPYEFYQYWRNVDDADVEKCLALLTFLPMDEVRRLAALEGNKINEAKKVLAYE 298

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           +T ++HG +EA+KA  A+   F       ++PT++ISKD++ +G  +L ++V+     S 
Sbjct: 299 VTKLIHGEDEAKKAEEASEALFGAGKDMSNVPTVNISKDDLGKG--ILDILVETKILPSK 356

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
            EARR ++   + IN   +++  + +  +D     +I +  GKK++
Sbjct: 357 GEARRLIQQGGLSINEEKVTDINMAVT-EDLFEENSIIIRRGKKSY 401


>gi|295689547|ref|YP_003593240.1| tyrosyl-tRNA synthetase [Caulobacter segnis ATCC 21756]
 gi|295431450|gb|ADG10622.1| tyrosyl-tRNA synthetase [Caulobacter segnis ATCC 21756]
          Length = 419

 Score =  520 bits (1340), Expect = e-145,   Method: Composition-based stats.
 Identities = 206/414 (49%), Positives = 279/414 (67%), Gaps = 1/414 (0%)

Query: 2   PAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
            +FKS+FL  L  RG+IHQI++P ELD   S G+VTAYIG+D TA SLH G L Q+MLL 
Sbjct: 5   SSFKSEFLRTLEARGYIHQITHPEELDAAASAGIVTAYIGFDATAPSLHVGSLIQIMLLR 64

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKT 121
            LQ+ GHKPI LMGGGT+ +GDP+ +DESR+++   +IQ NI  IK +F+ F+ +G G T
Sbjct: 65  RLQQAGHKPIVLMGGGTTKVGDPTGKDESRKLLSDADIQANIAGIKQVFAKFLTFGDGPT 124

Query: 122 DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA 181
           DA+M++N+ WL    Y+  LRE G  F+VNRML+F+SV+ RL+REQ ++FLEFNYM++QA
Sbjct: 125 DAIMVDNDVWLSKFGYVQFLREYGVHFTVNRMLAFDSVKLRLEREQPMTFLEFNYMLMQA 184

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            DF+EL + + C LQMGGSDQWGNI+ G++L  R+     F LT+PLL TASG KMGKT 
Sbjct: 185 VDFLELNRAHGCVLQMGGSDQWGNILNGVELTRRVDQKSAFGLTTPLLATASGAKMGKTA 244

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKI 301
           +GA+WLN E  SPY++WQ+WRN +DADV  F K  T LP+ +I  +  L+G +INEAKK+
Sbjct: 245 AGAVWLNAEQLSPYDYWQFWRNTEDADVGRFLKLFTDLPLEKIAELEALEGAQINEAKKV 304

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGF 361
           +A E T M HG EEA KA  AA + F+    S  +PT  +   ++  G+ L  L   AG 
Sbjct: 305 LADEATRMAHGEEEARKARDAAEKAFEQGALSADLPTFEVPAADLEAGIVLAALFTDAGL 364

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           A S  EARR  +   +K+N+   ++    I   D    G +KL+ GKK  ++  
Sbjct: 365 AGSRGEARRLAQGGGLKVNDKAEADANRTITSADLV-EGVVKLAAGKKKIVLVK 417


>gi|218554205|ref|YP_002387118.1| tyrosyl-tRNA synthetase [Escherichia coli IAI1]
 gi|254783601|sp|B7M0J4|SYY_ECO8A RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|218360973|emb|CAQ98546.1| tyrosyl-tRNA synthetase [Escherichia coli IAI1]
          Length = 424

 Score =  520 bits (1340), Expect = e-145,   Method: Composition-based stats.
 Identities = 162/419 (38%), Positives = 239/419 (57%), Gaps = 11/419 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 4   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +QE ++KI+   + F+ +  G+  A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDCGENSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDF 184
            NN  W  ++  +  LR+IG  FSVN+M++ E+V+ RL RE Q +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNREDQGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K Y   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 184 ACLNKQYGVVLQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI   +   K  GK    A+ +
Sbjct: 244 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINTLEEEDKNSGKAPR-AQYV 302

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTL 355
           +A ++T +VHG E  + A       F  S+ +      + +    +   E+ +G  L+  
Sbjct: 303 LAEQVTRLVHGEEGLQAAKRITECLFSGSLSALSEADFEQLAQDGVPMVEMEKGADLMQA 362

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +V +    S  +AR+ + SNAI IN    S+ +   K +D        L  GKKN+ + 
Sbjct: 363 LVDSELQPSRGQARKTIASNAITINGEKQSDPEYFFKEEDRLFGRFTLLRRGKKNYCLI 421


>gi|191165889|ref|ZP_03027726.1| tyrosyl-tRNA synthetase [Escherichia coli B7A]
 gi|190904020|gb|EDV63732.1| tyrosyl-tRNA synthetase [Escherichia coli B7A]
          Length = 424

 Score =  520 bits (1340), Expect = e-145,   Method: Composition-based stats.
 Identities = 163/419 (38%), Positives = 240/419 (57%), Gaps = 11/419 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 4   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +QE ++KI+   + F+ +  G+  A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDCGENSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDF 184
            NN  W  ++  +  LR+IG  FSVN+M++ E+V+ RL RE Q +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNREDQGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K YD  LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 184 ACLNKQYDVVLQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI   +   K  GK    A+ +
Sbjct: 244 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINALEEEDKNSGKAPR-AQYV 302

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTL 355
           +A ++T +VHG E  + A       F  S+ +      + +    +   E+ +G  L+  
Sbjct: 303 LAEQVTRLVHGEEGLQAAKRITECLFSGSLSALSEADFEQLAQDGVPMVEMEKGADLMQA 362

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +V +    S  +AR+ + SNAI IN    S+ +   K +D        L  GKKN+ + 
Sbjct: 363 LVDSELQPSRGQARKTIASNAITINGEKQSDPEYFFKEEDRLFGRYTLLRRGKKNYCLI 421


>gi|168771181|ref|ZP_02796188.1| tyrosyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4486]
 gi|189360026|gb|EDU78445.1| tyrosyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4486]
          Length = 424

 Score =  520 bits (1340), Expect = e-145,   Method: Composition-based stats.
 Identities = 162/419 (38%), Positives = 239/419 (57%), Gaps = 11/419 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 4   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +QE ++KI+   + F+ +  G+  A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDCGENSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDF 184
            NN  W  ++  +  LR+IG  FSVN+M++ E+V+ RL RE Q +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNREDQGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K Y   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 184 ACLNKQYGVVLQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI   +   K  GK    A+ +
Sbjct: 244 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINALEEEDKNSGKAPR-AQYV 302

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTL 355
           +A ++T +VHG E  + A       F  S+ +      + +    +   E+ +G  L+  
Sbjct: 303 LAEQVTRLVHGEEGLQAAKRITECLFSGSLSALSEADFEQLAQDGVPMVEMEKGADLMQA 362

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +V +    S  +AR+ + SNAI IN    S+ +   K +D        L  GKKN+ + 
Sbjct: 363 LVDSELQPSRGQARKTIASNAITINGEKQSDPEYFFKEEDRLFGRFTLLRRGKKNYCVI 421


>gi|15831600|ref|NP_310373.1| tyrosyl-tRNA synthetase [Escherichia coli O157:H7 str. Sakai]
 gi|16129595|ref|NP_416154.1| tyrosyl-tRNA synthetase [Escherichia coli str. K-12 substr. MG1655]
 gi|74312035|ref|YP_310454.1| tyrosyl-tRNA synthetase [Shigella sonnei Ss046]
 gi|89108479|ref|AP_002259.1| tyrosyl-tRNA synthetase [Escherichia coli str. K-12 substr. W3110]
 gi|157157482|ref|YP_001462928.1| tyrosyl-tRNA synthetase [Escherichia coli E24377A]
 gi|157161099|ref|YP_001458417.1| tyrosyl-tRNA synthetase [Escherichia coli HS]
 gi|168775869|ref|ZP_02800876.1| tyrosyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4196]
 gi|168783462|ref|ZP_02808469.1| tyrosyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4076]
 gi|168789476|ref|ZP_02814483.1| tyrosyl-tRNA synthetase [Escherichia coli O157:H7 str. EC869]
 gi|170020011|ref|YP_001724965.1| tyrosyl-tRNA synthetase [Escherichia coli ATCC 8739]
 gi|170081301|ref|YP_001730621.1| tyrosyl-tRNA synthetase [Escherichia coli str. K-12 substr. DH10B]
 gi|170683918|ref|YP_001743617.1| tyrosyl-tRNA synthetase [Escherichia coli SMS-3-5]
 gi|187731260|ref|YP_001880393.1| tyrosyl-tRNA synthetase [Shigella boydii CDC 3083-94]
 gi|188495334|ref|ZP_03002604.1| tyrosyl-tRNA synthetase [Escherichia coli 53638]
 gi|191173441|ref|ZP_03034969.1| tyrosyl-tRNA synthetase [Escherichia coli F11]
 gi|193070259|ref|ZP_03051203.1| tyrosyl-tRNA synthetase [Escherichia coli E110019]
 gi|208810466|ref|ZP_03252342.1| tyrosyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4206]
 gi|208816760|ref|ZP_03257880.1| tyrosyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4045]
 gi|208821747|ref|ZP_03262067.1| tyrosyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4042]
 gi|209398956|ref|YP_002270707.1| tyrosyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4115]
 gi|209918951|ref|YP_002293035.1| tyrosyl-tRNA synthetase [Escherichia coli SE11]
 gi|217328817|ref|ZP_03444898.1| tyrosyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14588]
 gi|218699794|ref|YP_002407423.1| tyrosyl-tRNA synthetase [Escherichia coli IAI39]
 gi|218705138|ref|YP_002412657.1| tyrosyl-tRNA synthetase [Escherichia coli UMN026]
 gi|238900853|ref|YP_002926649.1| tyrosyl-tRNA synthetase [Escherichia coli BW2952]
 gi|254793254|ref|YP_003078091.1| tyrosyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14359]
 gi|256018168|ref|ZP_05432033.1| tyrosyl-tRNA synthetase [Shigella sp. D9]
 gi|256022700|ref|ZP_05436565.1| tyrosyl-tRNA synthetase [Escherichia sp. 4_1_40B]
 gi|260843943|ref|YP_003221721.1| tyrosyl-tRNA synthetase [Escherichia coli O103:H2 str. 12009]
 gi|260855462|ref|YP_003229353.1| tyrosyl-tRNA synthetase [Escherichia coli O26:H11 str. 11368]
 gi|260868129|ref|YP_003234531.1| tyrosyl-tRNA synthetase [Escherichia coli O111:H- str. 11128]
 gi|261227917|ref|ZP_05942198.1| tyrosyl-tRNA synthetase [Escherichia coli O157:H7 str. FRIK2000]
 gi|261258349|ref|ZP_05950882.1| tyrosyl-tRNA synthetase [Escherichia coli O157:H7 str. FRIK966]
 gi|293405137|ref|ZP_06649129.1| tyrosyl-tRNA synthetase [Escherichia coli FVEC1412]
 gi|293409950|ref|ZP_06653526.1| tyrosyl-tRNA synthetase [Escherichia coli B354]
 gi|298380784|ref|ZP_06990383.1| tyrosyl-tRNA synthetase [Escherichia coli FVEC1302]
 gi|301027691|ref|ZP_07191005.1| tyrosyl-tRNA synthetase [Escherichia coli MS 196-1]
 gi|307138293|ref|ZP_07497649.1| tyrosyl-tRNA synthetase [Escherichia coli H736]
 gi|307310790|ref|ZP_07590436.1| tyrosyl-tRNA synthetase [Escherichia coli W]
 gi|309788396|ref|ZP_07683000.1| tyrosyl-tRNA synthetase [Shigella dysenteriae 1617]
 gi|312969658|ref|ZP_07783841.1| tyrosyl-tRNA synthetase [Escherichia coli 1827-70]
 gi|331657609|ref|ZP_08358571.1| tyrosine--tRNA ligase [Escherichia coli TA206]
 gi|331663109|ref|ZP_08364019.1| tyrosine--tRNA ligase [Escherichia coli TA143]
 gi|331668315|ref|ZP_08369163.1| tyrosine--tRNA ligase [Escherichia coli TA271]
 gi|331683145|ref|ZP_08383746.1| tyrosine--tRNA ligase [Escherichia coli H299]
 gi|84028838|sp|P0AGK0|SYY_ECO57 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|84028839|sp|P0AGJ9|SYY_ECOLI RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|97201988|sp|Q3Z1Z3|SYY_SHISS RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|189083649|sp|A7ZM99|SYY_ECO24 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|189083650|sp|A8A0I0|SYY_ECOHS RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|189083652|sp|B1IQB7|SYY_ECOLC RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|254783598|sp|B5Z471|SYY_ECO5E RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|254783599|sp|B7NTZ5|SYY_ECO7I RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|254783602|sp|B1XFU9|SYY_ECODH RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|254783603|sp|B7NB91|SYY_ECOLU RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|254783604|sp|B6IB76|SYY_ECOSE RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|254783605|sp|B1LEP9|SYY_ECOSM RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|254783636|sp|B2U2D7|SYY_SHIB3 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|259516991|sp|C4ZYA0|SYY_ECOBW RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|148094|gb|AAA24707.1| tyrosyl-tRNA synthetase (tyrS) [Escherichia coli]
 gi|1787925|gb|AAC74709.1| tyrosyl-tRNA synthetase [Escherichia coli str. K-12 substr. MG1655]
 gi|13361813|dbj|BAB35769.1| tyrosine tRNA synthetase [Escherichia coli O157:H7 str. Sakai]
 gi|73855512|gb|AAZ88219.1| tyrosine tRNA synthetase [Shigella sonnei Ss046]
 gi|85675050|dbj|BAA15398.2| tyrosyl-tRNA synthetase [Escherichia coli str. K12 substr. W3110]
 gi|157066779|gb|ABV06034.1| tyrosyl-tRNA synthetase [Escherichia coli HS]
 gi|157079512|gb|ABV19220.1| tyrosyl-tRNA synthetase [Escherichia coli E24377A]
 gi|169754939|gb|ACA77638.1| tyrosyl-tRNA synthetase [Escherichia coli ATCC 8739]
 gi|169889136|gb|ACB02843.1| tyrosyl-tRNA synthetase [Escherichia coli str. K-12 substr. DH10B]
 gi|170521636|gb|ACB19814.1| tyrosyl-tRNA synthetase [Escherichia coli SMS-3-5]
 gi|187428252|gb|ACD07526.1| tyrosyl-tRNA synthetase [Shigella boydii CDC 3083-94]
 gi|187768721|gb|EDU32565.1| tyrosyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4196]
 gi|188490533|gb|EDU65636.1| tyrosyl-tRNA synthetase [Escherichia coli 53638]
 gi|188999202|gb|EDU68188.1| tyrosyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4076]
 gi|189370947|gb|EDU89363.1| tyrosyl-tRNA synthetase [Escherichia coli O157:H7 str. EC869]
 gi|190906283|gb|EDV65894.1| tyrosyl-tRNA synthetase [Escherichia coli F11]
 gi|192956440|gb|EDV86899.1| tyrosyl-tRNA synthetase [Escherichia coli E110019]
 gi|208724982|gb|EDZ74689.1| tyrosyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4206]
 gi|208731103|gb|EDZ79792.1| tyrosyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4045]
 gi|208741870|gb|EDZ89552.1| tyrosyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4042]
 gi|209160356|gb|ACI37789.1| tyrosyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4115]
 gi|209912210|dbj|BAG77284.1| tyrosyl-tRNA synthase [Escherichia coli SE11]
 gi|217318164|gb|EEC26591.1| tyrosyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14588]
 gi|218369780|emb|CAR17551.1| tyrosyl-tRNA synthetase [Escherichia coli IAI39]
 gi|218432235|emb|CAR13125.1| tyrosyl-tRNA synthetase [Escherichia coli UMN026]
 gi|238863733|gb|ACR65731.1| tyrosyl-tRNA synthetase [Escherichia coli BW2952]
 gi|254592654|gb|ACT72015.1| tyrosyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14359]
 gi|257754111|dbj|BAI25613.1| tyrosyl-tRNA synthetase [Escherichia coli O26:H11 str. 11368]
 gi|257759090|dbj|BAI30587.1| tyrosyl-tRNA synthetase [Escherichia coli O103:H2 str. 12009]
 gi|257764485|dbj|BAI35980.1| tyrosyl-tRNA synthetase [Escherichia coli O111:H- str. 11128]
 gi|260449238|gb|ACX39660.1| tyrosyl-tRNA synthetase [Escherichia coli DH1]
 gi|281178710|dbj|BAI55040.1| tyrosyl-tRNA synthetase [Escherichia coli SE15]
 gi|291427345|gb|EFF00372.1| tyrosyl-tRNA synthetase [Escherichia coli FVEC1412]
 gi|291470418|gb|EFF12902.1| tyrosyl-tRNA synthetase [Escherichia coli B354]
 gi|298278226|gb|EFI19740.1| tyrosyl-tRNA synthetase [Escherichia coli FVEC1302]
 gi|299879184|gb|EFI87395.1| tyrosyl-tRNA synthetase [Escherichia coli MS 196-1]
 gi|306908968|gb|EFN39464.1| tyrosyl-tRNA synthetase [Escherichia coli W]
 gi|308923778|gb|EFP69281.1| tyrosyl-tRNA synthetase [Shigella dysenteriae 1617]
 gi|309701864|emb|CBJ01176.1| tyrosyl-tRNA synthetase [Escherichia coli ETEC H10407]
 gi|310337943|gb|EFQ03032.1| tyrosyl-tRNA synthetase [Escherichia coli 1827-70]
 gi|315060945|gb|ADT75272.1| tyrosyl-tRNA synthetase [Escherichia coli W]
 gi|315136278|dbj|BAJ43437.1| tyrosyl-tRNA synthetase [Escherichia coli DH1]
 gi|315618827|gb|EFU99410.1| tyrosyl-tRNA synthetase [Escherichia coli 3431]
 gi|320186309|gb|EFW61045.1| tyrosyl-tRNA synthetase [Shigella flexneri CDC 796-83]
 gi|320188324|gb|EFW62986.1| tyrosyl-tRNA synthetase [Escherichia coli O157:H7 str. EC1212]
 gi|320195465|gb|EFW70090.1| tyrosyl-tRNA synthetase [Escherichia coli WV_060327]
 gi|320647309|gb|EFX16117.1| tyrosyl-tRNA synthetase [Escherichia coli O157:H- str. 493-89]
 gi|320652989|gb|EFX21185.1| tyrosyl-tRNA synthetase [Escherichia coli O55:H7 str. 3256-97 TW
           07815]
 gi|320658672|gb|EFX26349.1| tyrosyl-tRNA synthetase [Escherichia coli O55:H7 str. USDA 5905]
 gi|320668662|gb|EFX35467.1| tyrosyl-tRNA synthetase [Escherichia coli O157:H7 str. LSU-61]
 gi|323152858|gb|EFZ39128.1| tyrosyl-tRNA synthetase [Escherichia coli EPECa14]
 gi|323163514|gb|EFZ49340.1| tyrosyl-tRNA synthetase [Escherichia coli E128010]
 gi|323169198|gb|EFZ54874.1| tyrosyl-tRNA synthetase [Shigella sonnei 53G]
 gi|323169944|gb|EFZ55600.1| tyrosyl-tRNA synthetase [Escherichia coli LT-68]
 gi|323180952|gb|EFZ66490.1| tyrosyl-tRNA synthetase [Escherichia coli 1180]
 gi|323186090|gb|EFZ71446.1| tyrosyl-tRNA synthetase [Escherichia coli 1357]
 gi|323378484|gb|ADX50752.1| tyrosyl-tRNA synthetase [Escherichia coli KO11]
 gi|323937243|gb|EGB33522.1| tyrosyl-tRNA synthetase [Escherichia coli E1520]
 gi|323940694|gb|EGB36885.1| tyrosyl-tRNA synthetase [Escherichia coli E482]
 gi|323948066|gb|EGB44058.1| tyrosyl-tRNA synthetase [Escherichia coli H120]
 gi|323968405|gb|EGB63811.1| tyrosyl-tRNA synthetase [Escherichia coli M863]
 gi|323978223|gb|EGB73309.1| tyrosyl-tRNA synthetase [Escherichia coli TW10509]
 gi|324119124|gb|EGC13012.1| tyrosyl-tRNA synthetase [Escherichia coli E1167]
 gi|326342004|gb|EGD65785.1| tyrosyl-tRNA synthetase [Escherichia coli O157:H7 str. 1044]
 gi|326343555|gb|EGD67317.1| tyrosyl-tRNA synthetase [Escherichia coli O157:H7 str. 1125]
 gi|327252753|gb|EGE64407.1| tyrosyl-tRNA synthetase [Escherichia coli STEC_7v]
 gi|330911444|gb|EGH39954.1| tyrosyl-tRNA synthetase [Escherichia coli AA86]
 gi|331055857|gb|EGI27866.1| tyrosine--tRNA ligase [Escherichia coli TA206]
 gi|331058908|gb|EGI30885.1| tyrosine--tRNA ligase [Escherichia coli TA143]
 gi|331063509|gb|EGI35420.1| tyrosine--tRNA ligase [Escherichia coli TA271]
 gi|331079360|gb|EGI50557.1| tyrosine--tRNA ligase [Escherichia coli H299]
 gi|332096089|gb|EGJ01094.1| tyrosyl-tRNA synthetase [Shigella boydii 3594-74]
 gi|332343355|gb|AEE56689.1| tyrosyl-tRNA synthetase TyrS [Escherichia coli UMNK88]
          Length = 424

 Score =  520 bits (1340), Expect = e-145,   Method: Composition-based stats.
 Identities = 162/419 (38%), Positives = 239/419 (57%), Gaps = 11/419 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 4   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +QE ++KI+   + F+ +  G+  A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDCGENSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDF 184
            NN  W  ++  +  LR+IG  FSVN+M++ E+V+ RL RE Q +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNREDQGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K Y   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 184 ACLNKQYGVVLQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI   +   K  GK    A+ +
Sbjct: 244 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINALEEEDKNSGKAPR-AQYV 302

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTL 355
           +A ++T +VHG E  + A       F  S+ +      + +    +   E+ +G  L+  
Sbjct: 303 LAEQVTRLVHGEEGLQAAKRITECLFSGSLSALSEADFEQLAQDGVPMVEMEKGADLMQA 362

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +V +    S  +AR+ + SNAI IN    S+ +   K +D        L  GKKN+ + 
Sbjct: 363 LVDSELQPSRGQARKTIASNAITINGEKQSDPEYFFKEEDRLFGRFTLLRRGKKNYCLI 421


>gi|320641992|gb|EFX11356.1| tyrosyl-tRNA synthetase [Escherichia coli O157:H7 str. G5101]
          Length = 424

 Score =  520 bits (1340), Expect = e-145,   Method: Composition-based stats.
 Identities = 162/419 (38%), Positives = 239/419 (57%), Gaps = 11/419 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 4   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +QE ++KI+   + F+ +  G+  A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDCGENSAIT 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDF 184
            NN  W  ++  +  LR+IG  FSVN+M++ E+V+ RL RE Q +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNREDQGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K Y   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 184 ACLNKQYGVVLQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI   +   K  GK    A+ +
Sbjct: 244 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINALEEEDKNSGKAPR-AQYV 302

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTL 355
           +A ++T +VHG E  + A       F  S+ +      + +    +   E+ +G  L+  
Sbjct: 303 LAEQVTRLVHGEEGLQAAKRITECLFSGSLSALSEADFEQLAQDGVPMVEMEKGADLMQA 362

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +V +    S  +AR+ + SNAI IN    S+ +   K +D        L  GKKN+ + 
Sbjct: 363 LVDSELQPSRGQARKTIASNAITINGEKQSDPEYFFKEEDRLFGRFTLLRRGKKNYCLI 421


>gi|167646543|ref|YP_001684206.1| tyrosyl-tRNA synthetase [Caulobacter sp. K31]
 gi|189083645|sp|B0SXC3|SYY_CAUSK RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|167348973|gb|ABZ71708.1| tyrosyl-tRNA synthetase [Caulobacter sp. K31]
          Length = 419

 Score =  520 bits (1340), Expect = e-145,   Method: Composition-based stats.
 Identities = 204/413 (49%), Positives = 279/413 (67%), Gaps = 1/413 (0%)

Query: 3   AFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
           +FKS+FL  L  RG+IHQI++P ELD   + G+VTAYIG+D TA SLH G L Q+M+L  
Sbjct: 6   SFKSEFLQTLQARGYIHQITHPDELDAAAAGGIVTAYIGFDATAPSLHVGSLIQIMMLRR 65

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD 122
           LQ+ GHKPI LMGGGT+ +GDP+ +DESR+++   +I  NI  IK +F+ F+ +G G TD
Sbjct: 66  LQQAGHKPIVLMGGGTTKVGDPTGKDESRKLLSDADIAANIAGIKQVFAKFLTFGDGPTD 125

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
           A+M++N+ WL    Y+  LR+ G  F+VNRML+F+SV+ RL+REQ ++FLEFNYM++QA 
Sbjct: 126 AIMVDNDVWLSKFGYVQFLRDYGVHFTVNRMLAFDSVKLRLEREQPMTFLEFNYMLMQAV 185

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DF+EL + + C LQMGGSDQWGNI+ G++L  R+     F LT+PLL TASG KMGKT+S
Sbjct: 186 DFLELNRAHGCVLQMGGSDQWGNILNGVELTRRVDHKAAFGLTTPLLATASGAKMGKTMS 245

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKII 302
           GA+WLN E  SPY++WQ+WRN +DADV  F K  T LP+ EI R+  L G +IN+AKK++
Sbjct: 246 GAVWLNAEQLSPYDYWQFWRNTEDADVGRFLKLFTDLPLDEIARLEALPGAQINDAKKVL 305

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFA 362
           A E T M HG +EA KA  AA + F+    S  +PT  I+  E+  G+ L  L   AG A
Sbjct: 306 ADEATRMAHGEDEARKARDAAEKAFEQGALSADLPTFEIAAAELKAGIVLANLFADAGLA 365

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            S  EARR  +   +K+N+    +    +   D    G +KL+ GKK  ++  
Sbjct: 366 ASRGEARRLAQGGGVKVNDKAEPDANRVVTEADLV-EGVVKLAAGKKKIVLVK 417


>gi|320652603|gb|EFX20872.1| tyrosyl-tRNA synthetase [Escherichia coli O157:H- str. H 2687]
          Length = 424

 Score =  520 bits (1340), Expect = e-145,   Method: Composition-based stats.
 Identities = 162/419 (38%), Positives = 239/419 (57%), Gaps = 11/419 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 4   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +QE ++KI+   + F+ +  G+  A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDCGENSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDF 184
            NN  W  ++  +  LR+IG  FSVN+M++ E+V+ RL R EQ +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNREEQGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K Y   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 184 ACLNKQYGVVLQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI   +   K  GK    A+ +
Sbjct: 244 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINALEEEDKNSGKAPR-AQYV 302

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTL 355
           +A ++T +VHG E  + A       F  S+ +      + +    +   E+ +G  L+  
Sbjct: 303 LAEQVTRLVHGEEGLQAAKRITECLFSGSLSALSEADFEQLAQDGVPMVEMEKGADLMQA 362

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +V +    S  +AR+ + SNAI IN    S+ +   K +D        L  GKKN+ + 
Sbjct: 363 LVDSELQPSRGQARKTIASNAITINGEKQSDPEYFFKEEDRLFGRFTLLRRGKKNYCLI 421


>gi|227328527|ref|ZP_03832551.1| tyrosyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           carotovorum WPP14]
          Length = 425

 Score =  520 bits (1339), Expect = e-145,   Method: Composition-based stats.
 Identities = 160/419 (38%), Positives = 232/419 (55%), Gaps = 11/419 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG I Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q 
Sbjct: 4   SNLIKQLQERGLIAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQL 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
           +GHKP++L+GG T +IGDPSF+   R++  ++ + E +EKI+   S F+ +  GK  A+ 
Sbjct: 64  SGHKPVALVGGATGLIGDPSFKATERKLNTAETVGEWVEKIRRQVSPFLDFDCGKNSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYDF 184
            NN  W  ++  +D LR+IG  FSVN+M+S E+V+ RL R+   +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGNMNVLDFLRDIGKHFSVNQMISKEAVKQRLNRDDVGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K +D  LQ+GGSDQWGNI  GIDL  R+   +++ LT PL+T + GTK GKT  GA
Sbjct: 184 ASLNKQHDVELQIGGSDQWGNITSGIDLTRRMNQKQVYGLTVPLITKSDGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ---GKEINEAKKI 301
           IWL+   TSPY F+Q+W N  DADV  F K  T + + +ID + +     GK    A+ +
Sbjct: 244 IWLDASKTSPYKFYQFWINTADADVYRFLKFFTFMSLEDIDALEEEDKNSGKAPR-AQYV 302

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTL 355
           +A E+T MVHG    E A       F  ++          +    +   E+  G  L   
Sbjct: 303 LAEEVTRMVHGEAGLEAARRITQSLFSGALQDMTQDDFAQLAQDGMPIIELENGADLQQA 362

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +V A    S  +AR  + SNA+ IN    ++ +      D        L  GKK++ + 
Sbjct: 363 LVSAELVPSRGQARTMIASNAVTINGEKQADPEYTFSDSDRLFDRYTLLRRGKKHYCLI 421


>gi|28212031|ref|NP_782975.1| tyrosyl-tRNA synthetase [Clostridium tetani E88]
 gi|28204474|gb|AAO36912.1| tyrosyl-tRNA synthetase [Clostridium tetani E88]
          Length = 412

 Score =  519 bits (1338), Expect = e-145,   Method: Composition-based stats.
 Identities = 174/406 (42%), Positives = 268/406 (66%), Gaps = 7/406 (1%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           ++   +L ERG+I Q ++  E+  L ++  +T YIG+D TA SLH GH   LM++  +QK
Sbjct: 8   NNVFDVLKERGYIKQTTHEEEIRDLINKDKITFYIGFDPTADSLHIGHFLPLMMMAHMQK 67

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+PI+L+GGGT  IGDPS + E R+M+  + I +N+  IK   S FI +   K  A++
Sbjct: 68  AGHRPIALVGGGTVRIGDPSGKSEMRKMLSKEAIDKNVSSIKSQISRFIDFSDDK--AIL 125

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           ++N  WL ++ Y++ +REIG  FSVN+ML+ E  + RL  E+ LSFLEFNYM++QAYDF+
Sbjct: 126 VDNADWLLNLNYLEFIREIGVHFSVNKMLTAECFKQRL--EKGLSFLEFNYMLMQAYDFL 183

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L + Y C +++GG DQW N++ G DL  R ++   +A+T  LLT + G KMGKT++GA+
Sbjct: 184 CLNRKYGCVMELGGDDQWSNMLAGTDLIRREESKSAYAMTCTLLTNSEGNKMGKTVNGAL 243

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
           WL+K+ TSPY F+QYWRN+DDADV      LT LPM E+ R+A L+G +INEAKK++A E
Sbjct: 244 WLDKDKTSPYEFYQYWRNVDDADVEKCLALLTFLPMDEVRRLAALEGNKINEAKKVLAYE 303

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           +T ++HG +EA+KA  A+   F       ++PT++ISKD++ +G  +L ++V+     S 
Sbjct: 304 VTKLIHGEDEAKKAEEASEALFGAGKDMSNVPTVNISKDDLGKG--ILDILVETKILPSK 361

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
            EARR ++   + IN   +++  + +  +D     +I +  GKK++
Sbjct: 362 GEARRLIQQGGLSINEEKVTDINMAVT-EDLFEENSIIIRRGKKSY 406


>gi|154253705|ref|YP_001414529.1| tyrosyl-tRNA synthetase [Parvibaculum lavamentivorans DS-1]
 gi|154157655|gb|ABS64872.1| tyrosyl-tRNA synthetase [Parvibaculum lavamentivorans DS-1]
          Length = 416

 Score =  519 bits (1338), Expect = e-145,   Method: Composition-based stats.
 Identities = 234/418 (55%), Positives = 296/418 (70%), Gaps = 2/418 (0%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  FKSDFL  L  RGFIHQ S+   LD + +  V+T YIGYD TA SLH GHL Q+M+L
Sbjct: 1   MAKFKSDFLRELEARGFIHQQSDAGALDEIAATRVLTGYIGYDCTAPSLHVGHLMQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            WLQKTG KPI+LMGGGT+ IGDPSFRDE+R ++  ++I EN+  IK +FS F+ +G G+
Sbjct: 61  RWLQKTGGKPIALMGGGTTRIGDPSFRDEARPLLTDEKIDENLAGIKNVFSKFLDFGAGE 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           T A+M+NN  WL  ++YID LR+ G  FSVNRMLSF+SV+ RL REQ+LSFLEFNYMILQ
Sbjct: 121 TGAIMVNNRDWLDKLQYIDFLRDYGRHFSVNRMLSFDSVKLRLDREQNLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVEL + Y C LQMGGSDQWGNI+ GI+L  R    ++F LTSPLLTT+SG KMGKT
Sbjct: 181 AYDFVELNRQYGCELQMGGSDQWGNIVNGIELARRTAGAQVFGLTSPLLTTSSGAKMGKT 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
            SGA+WLN +M SPY +WQYWRN +DADV  F K  T LP+SEI R   L G EINEAKK
Sbjct: 241 ASGAVWLNADMLSPYEYWQYWRNAEDADVGRFLKLFTELPLSEIARFEALGGSEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           ++ATE T MVHGR EAEKAA AA   F+    S  +PT+   +     G+      V+AG
Sbjct: 301 VLATETTAMVHGRAEAEKAAEAARTAFEEGAISADLPTVETGELAGGLGLLTAL--VQAG 358

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLCG 418
              ST++ARR +K  A+++N++ +++EK+ +  +     G +KLS GKK H++    G
Sbjct: 359 LCASTSDARRQIKGGAVRVNDAAVADEKMVLNRESLTGDGVVKLSLGKKKHVLLRPKG 416


>gi|218548767|ref|YP_002382558.1| tyrosyl-tRNA synthetase [Escherichia fergusonii ATCC 35469]
 gi|254783607|sp|B7LQN3|SYY_ESCF3 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|218356308|emb|CAQ88926.1| tyrosyl-tRNA synthetase [Escherichia fergusonii ATCC 35469]
 gi|324113411|gb|EGC07386.1| tyrosyl-tRNA synthetase [Escherichia fergusonii B253]
          Length = 424

 Score =  519 bits (1338), Expect = e-145,   Method: Composition-based stats.
 Identities = 161/419 (38%), Positives = 239/419 (57%), Gaps = 11/419 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 4   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +QE ++KI+   + F+ +  G+  A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDCGENSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDF 184
            NN  W  ++  +  LR+IG  FSVN+M++ E+V+ RL RE Q +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNREDQGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K Y   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 184 ACLNKLYGVSLQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI   +   K  GK    A+ +
Sbjct: 244 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINALEEEDKNSGKAPR-AQYV 302

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTL 355
           +A ++T +VHG E  + A       F  S+ +      + +    +   E+ +G  L+  
Sbjct: 303 LAEQVTRLVHGEEGLQAAKRITECLFSGSLSALSEADFEQLAQDGVPMVEMEKGADLMQA 362

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +V +    S  +AR+ + SNA+ IN    S+ +   K +D        L  GKKN+ + 
Sbjct: 363 LVDSELQPSRGQARKTIASNAVTINGEKQSDPEYFFKEEDRLFGRFTLLRRGKKNYCLI 421


>gi|288959225|ref|YP_003449566.1| tyrosyl-tRNA synthetase [Azospirillum sp. B510]
 gi|288911533|dbj|BAI73022.1| tyrosyl-tRNA synthetase [Azospirillum sp. B510]
          Length = 428

 Score =  519 bits (1338), Expect = e-145,   Method: Composition-based stats.
 Identities = 212/422 (50%), Positives = 286/422 (67%), Gaps = 5/422 (1%)

Query: 2   PAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
            A  S+FL  L ERGFIHQ ++   LD    +G + AYIG+D TA SLH G L  +M+L 
Sbjct: 7   SAPASEFLRTLQERGFIHQCTDLATLDERARKGPIVAYIGFDCTAESLHVGSLLPIMMLR 66

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT--- 118
           WLQKTGHKPI LMGGGT+ IGDPS +DE+R+++  + I  N+  IK IF  ++ +     
Sbjct: 67  WLQKTGHKPIVLMGGGTTKIGDPSGKDEARQLLTDEVIAGNMAGIKRIFGRYLTFAPEGT 126

Query: 119 --GKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNY 176
             G TDA+M+NN  WL  +KYI LLR+IG  F++NRM++F+SV+ RL+REQ L+FLEFNY
Sbjct: 127 TGGPTDAVMVNNADWLDELKYIPLLRDIGRHFTINRMMTFDSVKLRLEREQPLTFLEFNY 186

Query: 177 MILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTK 236
           MILQAYDFVEL + + C LQMGGSDQWGNI+ G++LG R    +LF LT+PLLTT+SG K
Sbjct: 187 MILQAYDFVELKRRHGCSLQMGGSDQWGNIVNGVELGRRTDGAELFGLTTPLLTTSSGAK 246

Query: 237 MGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN 296
           MGKT +GAIWL  +    Y FWQYWRN +DADV  F +  T LP+ E+ R+  LQG EIN
Sbjct: 247 MGKTAAGAIWLTADKLGSYEFWQYWRNTEDADVGRFLRLYTELPLDEVARLESLQGAEIN 306

Query: 297 EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLI 356
           EAKKI+A E+T + HG E A +AA  A   F+    +  +P+I +++ ++  G+ ++ L+
Sbjct: 307 EAKKILANEVTRLAHGEEAALEAAETARRAFEEGAAADGLPSIEVARADLEAGLPVVDLL 366

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V AG A S  EARR +K    K+N+  I++E  +    D ++ G +KLS GKK H +  +
Sbjct: 367 VSAGLAASKGEARRLIKGGGAKLNDGPIADETAKATAADLNADGVVKLSAGKKRHALVKV 426

Query: 417 CG 418
            G
Sbjct: 427 GG 428


>gi|15802051|ref|NP_288073.1| tyrosyl-tRNA synthetase [Escherichia coli O157:H7 EDL933]
 gi|291282769|ref|YP_003499587.1| Tyrosyl-tRNA synthetase [Escherichia coli O55:H7 str. CB9615]
 gi|293414953|ref|ZP_06657596.1| tyrosyl-tRNA synthetase [Escherichia coli B185]
 gi|300821490|ref|ZP_07101637.1| tyrosyl-tRNA synthetase [Escherichia coli MS 119-7]
 gi|300901554|ref|ZP_07119624.1| tyrosyl-tRNA synthetase [Escherichia coli MS 198-1]
 gi|300904483|ref|ZP_07122325.1| tyrosyl-tRNA synthetase [Escherichia coli MS 84-1]
 gi|300918002|ref|ZP_07134626.1| tyrosyl-tRNA synthetase [Escherichia coli MS 115-1]
 gi|300924666|ref|ZP_07140616.1| tyrosyl-tRNA synthetase [Escherichia coli MS 182-1]
 gi|300951219|ref|ZP_07165074.1| tyrosyl-tRNA synthetase [Escherichia coli MS 116-1]
 gi|300958509|ref|ZP_07170644.1| tyrosyl-tRNA synthetase [Escherichia coli MS 175-1]
 gi|300987923|ref|ZP_07178444.1| tyrosyl-tRNA synthetase [Escherichia coli MS 200-1]
 gi|301026794|ref|ZP_07190198.1| tyrosyl-tRNA synthetase [Escherichia coli MS 69-1]
 gi|301303150|ref|ZP_07209276.1| tyrosyl-tRNA synthetase [Escherichia coli MS 124-1]
 gi|301647814|ref|ZP_07247600.1| tyrosyl-tRNA synthetase [Escherichia coli MS 146-1]
 gi|331642230|ref|ZP_08343365.1| tyrosine--tRNA ligase [Escherichia coli H736]
 gi|331647126|ref|ZP_08348220.1| tyrosine--tRNA ligase [Escherichia coli M605]
 gi|331653033|ref|ZP_08354038.1| tyrosine--tRNA ligase [Escherichia coli M718]
 gi|331673205|ref|ZP_08373973.1| tyrosine--tRNA ligase [Escherichia coli TA280]
 gi|331677503|ref|ZP_08378178.1| tyrosine--tRNA ligase [Escherichia coli H591]
 gi|332279216|ref|ZP_08391629.1| tyrosyl-tRNA synthetase [Shigella sp. D9]
 gi|25292889|pir||F85770 tyrosine tRNA synthetase [imported] - Escherichia coli  (strain
           O157:H7, substrain EDL933)
 gi|12515629|gb|AAG56626.1|AE005387_4 tyrosine tRNA synthetase [Escherichia coli O157:H7 str. EDL933]
 gi|209769578|gb|ACI83101.1| tyrosine tRNA synthetase [Escherichia coli]
 gi|209769580|gb|ACI83102.1| tyrosine tRNA synthetase [Escherichia coli]
 gi|209769582|gb|ACI83103.1| tyrosine tRNA synthetase [Escherichia coli]
 gi|209769584|gb|ACI83104.1| tyrosine tRNA synthetase [Escherichia coli]
 gi|209769586|gb|ACI83105.1| tyrosine tRNA synthetase [Escherichia coli]
 gi|284921562|emb|CBG34634.1| tyrosyl-tRNA synthetase [Escherichia coli 042]
 gi|290762642|gb|ADD56603.1| Tyrosyl-tRNA synthetase [Escherichia coli O55:H7 str. CB9615]
 gi|291432601|gb|EFF05580.1| tyrosyl-tRNA synthetase [Escherichia coli B185]
 gi|300305997|gb|EFJ60517.1| tyrosyl-tRNA synthetase [Escherichia coli MS 200-1]
 gi|300314825|gb|EFJ64609.1| tyrosyl-tRNA synthetase [Escherichia coli MS 175-1]
 gi|300355042|gb|EFJ70912.1| tyrosyl-tRNA synthetase [Escherichia coli MS 198-1]
 gi|300395332|gb|EFJ78870.1| tyrosyl-tRNA synthetase [Escherichia coli MS 69-1]
 gi|300403579|gb|EFJ87117.1| tyrosyl-tRNA synthetase [Escherichia coli MS 84-1]
 gi|300414799|gb|EFJ98109.1| tyrosyl-tRNA synthetase [Escherichia coli MS 115-1]
 gi|300419155|gb|EFK02466.1| tyrosyl-tRNA synthetase [Escherichia coli MS 182-1]
 gi|300449509|gb|EFK13129.1| tyrosyl-tRNA synthetase [Escherichia coli MS 116-1]
 gi|300525993|gb|EFK47062.1| tyrosyl-tRNA synthetase [Escherichia coli MS 119-7]
 gi|300841559|gb|EFK69319.1| tyrosyl-tRNA synthetase [Escherichia coli MS 124-1]
 gi|301074058|gb|EFK88864.1| tyrosyl-tRNA synthetase [Escherichia coli MS 146-1]
 gi|315257562|gb|EFU37530.1| tyrosyl-tRNA synthetase [Escherichia coli MS 85-1]
 gi|315299669|gb|EFU58911.1| tyrosyl-tRNA synthetase [Escherichia coli MS 16-3]
 gi|324011400|gb|EGB80619.1| tyrosyl-tRNA synthetase [Escherichia coli MS 60-1]
 gi|324016573|gb|EGB85792.1| tyrosyl-tRNA synthetase [Escherichia coli MS 117-3]
 gi|331039028|gb|EGI11248.1| tyrosine--tRNA ligase [Escherichia coli H736]
 gi|331043909|gb|EGI16045.1| tyrosine--tRNA ligase [Escherichia coli M605]
 gi|331049131|gb|EGI21203.1| tyrosine--tRNA ligase [Escherichia coli M718]
 gi|331069403|gb|EGI40790.1| tyrosine--tRNA ligase [Escherichia coli TA280]
 gi|331073963|gb|EGI45283.1| tyrosine--tRNA ligase [Escherichia coli H591]
 gi|332101568|gb|EGJ04914.1| tyrosyl-tRNA synthetase [Shigella sp. D9]
          Length = 428

 Score =  519 bits (1338), Expect = e-145,   Method: Composition-based stats.
 Identities = 162/419 (38%), Positives = 239/419 (57%), Gaps = 11/419 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 8   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 67

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +QE ++KI+   + F+ +  G+  A+ 
Sbjct: 68  AGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDCGENSAIA 127

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDF 184
            NN  W  ++  +  LR+IG  FSVN+M++ E+V+ RL RE Q +SF EF+Y +LQ YDF
Sbjct: 128 ANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNREDQGISFTEFSYNLLQGYDF 187

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K Y   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 188 ACLNKQYGVVLQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 247

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI   +   K  GK    A+ +
Sbjct: 248 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINALEEEDKNSGKAPR-AQYV 306

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTL 355
           +A ++T +VHG E  + A       F  S+ +      + +    +   E+ +G  L+  
Sbjct: 307 LAEQVTRLVHGEEGLQAAKRITECLFSGSLSALSEADFEQLAQDGVPMVEMEKGADLMQA 366

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +V +    S  +AR+ + SNAI IN    S+ +   K +D        L  GKKN+ + 
Sbjct: 367 LVDSELQPSRGQARKTIASNAITINGEKQSDPEYFFKEEDRLFGRFTLLRRGKKNYCLI 425


>gi|215486814|ref|YP_002329245.1| tyrosyl-tRNA synthetase [Escherichia coli O127:H6 str. E2348/69]
 gi|218558508|ref|YP_002391421.1| tyrosyl-tRNA synthetase [Escherichia coli S88]
 gi|218689584|ref|YP_002397796.1| tyrosyl-tRNA synthetase [Escherichia coli ED1a]
 gi|218695200|ref|YP_002402867.1| tyrosyl-tRNA synthetase [Escherichia coli 55989]
 gi|306813398|ref|ZP_07447588.1| tyrosyl-tRNA synthetase [Escherichia coli NC101]
 gi|312966599|ref|ZP_07780819.1| tyrosyl-tRNA synthetase [Escherichia coli 2362-75]
 gi|97201345|sp|Q8FH88|SYY_ECOL6 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|254783595|sp|B7URX8|SYY_ECO27 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|254783596|sp|B7M9Z1|SYY_ECO45 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|254783597|sp|B7L5J0|SYY_ECO55 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|254783600|sp|B7MVB5|SYY_ECO81 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|215264886|emb|CAS09272.1| tyrosyl-tRNA synthetase [Escherichia coli O127:H6 str. E2348/69]
 gi|218351932|emb|CAU97660.1| tyrosyl-tRNA synthetase [Escherichia coli 55989]
 gi|218365277|emb|CAR02998.1| tyrosyl-tRNA synthetase [Escherichia coli S88]
 gi|218427148|emb|CAR08031.2| tyrosyl-tRNA synthetase [Escherichia coli ED1a]
 gi|222033396|emb|CAP76137.1| Tyrosyl-tRNA synthetase [Escherichia coli LF82]
 gi|294493782|gb|ADE92538.1| tyrosyl-tRNA synthetase [Escherichia coli IHE3034]
 gi|305853143|gb|EFM53583.1| tyrosyl-tRNA synthetase [Escherichia coli NC101]
 gi|307553660|gb|ADN46435.1| tyrosine tRNA synthetase [Escherichia coli ABU 83972]
 gi|312288709|gb|EFR16609.1| tyrosyl-tRNA synthetase [Escherichia coli 2362-75]
 gi|312946238|gb|ADR27065.1| tyrosyl-tRNA synthetase [Escherichia coli O83:H1 str. NRG 857C]
 gi|323187062|gb|EFZ72378.1| tyrosyl-tRNA synthetase [Escherichia coli RN587/1]
 gi|323952148|gb|EGB48021.1| tyrosyl-tRNA synthetase [Escherichia coli H252]
          Length = 424

 Score =  519 bits (1338), Expect = e-145,   Method: Composition-based stats.
 Identities = 161/419 (38%), Positives = 239/419 (57%), Gaps = 11/419 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 4   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +QE ++KI+   + F+ +  G+  A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDCGENSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDF 184
            NN  W  ++  +  LR+IG  FSVN+M++ E+V+ RL RE Q +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNREDQGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K Y   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 184 ACLNKQYGVVLQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI   +   K  GK    A+ +
Sbjct: 244 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINALEEEDKNSGKAPR-AQYV 302

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTL 355
           +A ++T +VHG +  + A       F  S+ +      + +    +   E+ +G  L+  
Sbjct: 303 LAEQVTRLVHGEDGLQAAKRITECLFSGSLSALSEADFEQLAQDGVPMVEMEKGADLMQA 362

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +V +    S  +AR+ + SNAI IN    S+ +   K +D        L  GKKN+ + 
Sbjct: 363 LVDSELQPSRGQARKTIASNAITINGEKQSDPEYFFKEEDRLFGRFTLLRRGKKNYCLI 421


>gi|320174157|gb|EFW49322.1| tyrosyl-tRNA synthetase [Shigella dysenteriae CDC 74-1112]
          Length = 424

 Score =  519 bits (1337), Expect = e-145,   Method: Composition-based stats.
 Identities = 162/419 (38%), Positives = 239/419 (57%), Gaps = 11/419 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 4   SNLIKQLQERGLVAQMTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +QE ++KI+   + F+ +  G+  A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDCGENSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDF 184
            NN  W  ++  +  LR+IG  FSVN+M++ E+V+ RL RE Q +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNREDQGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K Y   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 184 ACLNKQYGVVLQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI   +   K  GK    A+ +
Sbjct: 244 VWLDPKKTSPYKFYQFWLNTADADVYRFLKFFTFMSIEEINALEEEDKNSGKAPR-AQYV 302

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTL 355
           +A ++T +VHG E  + A       F  S+ +      + +    +   E+ +G  L+  
Sbjct: 303 LAEQVTRLVHGEEGLQAAKRITECLFSGSLSALSEADFEQLAQDGVPMVEMEKGADLMQA 362

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +V +    S  +AR+ + SNAI IN    S+ +   K +D        L  GKKN+ + 
Sbjct: 363 LVDSELQPSRGQARKTIASNAITINGEKQSDPEYFFKEEDRLFGRFTLLRRGKKNYCLI 421


>gi|30063152|ref|NP_837323.1| tyrosyl-tRNA synthetase [Shigella flexneri 2a str. 2457T]
 gi|194434313|ref|ZP_03066578.1| tyrosyl-tRNA synthetase [Shigella dysenteriae 1012]
 gi|30041401|gb|AAP17130.1| tyrosine tRNA synthetase [Shigella flexneri 2a str. 2457T]
 gi|194417461|gb|EDX33565.1| tyrosyl-tRNA synthetase [Shigella dysenteriae 1012]
 gi|281601071|gb|ADA74055.1| putative Tyrosyl-tRNA synthetase [Shigella flexneri 2002017]
 gi|313648912|gb|EFS13349.1| tyrosyl-tRNA synthetase [Shigella flexneri 2a str. 2457T]
 gi|320181340|gb|EFW56259.1| tyrosyl-tRNA synthetase [Shigella boydii ATCC 9905]
 gi|332094002|gb|EGI99055.1| tyrosyl-tRNA synthetase [Shigella dysenteriae 155-74]
 gi|332757144|gb|EGJ87484.1| tyrosyl-tRNA synthetase [Shigella flexneri 4343-70]
 gi|332758119|gb|EGJ88444.1| tyrosyl-tRNA synthetase [Shigella flexneri 2747-71]
 gi|332758468|gb|EGJ88789.1| tyrosyl-tRNA synthetase [Shigella flexneri K-671]
 gi|332767038|gb|EGJ97237.1| tyrosyl-tRNA synthetase [Shigella flexneri 2930-71]
 gi|333003899|gb|EGK23434.1| tyrosyl-tRNA synthetase [Shigella flexneri K-218]
 gi|333005293|gb|EGK24813.1| tyrosyl-tRNA synthetase [Shigella flexneri VA-6]
 gi|333005870|gb|EGK25386.1| tyrosyl-tRNA synthetase [Shigella flexneri K-272]
 gi|333018021|gb|EGK37326.1| tyrosyl-tRNA synthetase [Shigella flexneri K-304]
 gi|333018887|gb|EGK38180.1| tyrosyl-tRNA synthetase [Shigella flexneri K-227]
          Length = 424

 Score =  519 bits (1337), Expect = e-145,   Method: Composition-based stats.
 Identities = 163/419 (38%), Positives = 240/419 (57%), Gaps = 11/419 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 4   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +QE ++KI+   + F+ +  G+  A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDCGENSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDF 184
            NN  W  ++  +  LR+IG  FSVN+M++ E+V+ RL RE Q +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNREDQGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K YD  LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 184 ACLNKQYDVVLQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI   +   K  GK    A+ +
Sbjct: 244 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINALEEEDKNSGKAPR-AQYV 302

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTL 355
           +A ++T +VHG E  + A       F  S+ +      + +    +   E+ +G  L+  
Sbjct: 303 LAEQVTRLVHGEEGLQAAKRITECLFSGSLSALSEADFEQLAQDGVPMVEMEKGADLMQA 362

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +V +    S  +AR+ + SNAI IN    S+ +   K +D        L  GKKN+ + 
Sbjct: 363 LVDSELQPSRGQARKTIASNAITINGEKQSDPEYFFKEEDRLFGRFTLLRRGKKNYCLI 421


>gi|170749167|ref|YP_001755427.1| tyrosyl-tRNA synthetase [Methylobacterium radiotolerans JCM 2831]
 gi|170655689|gb|ACB24744.1| tyrosyl-tRNA synthetase [Methylobacterium radiotolerans JCM 2831]
          Length = 423

 Score =  519 bits (1337), Expect = e-145,   Method: Composition-based stats.
 Identities = 218/415 (52%), Positives = 295/415 (71%), Gaps = 2/415 (0%)

Query: 3   AFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
           A KSDFL IL+ERG+IHQ S+   +D    +G +T Y+GYD TA SLH GHL  +M+L W
Sbjct: 7   APKSDFLRILTERGYIHQTSDLAGIDAAALEGRLTTYVGYDCTAPSLHVGHLLSIMMLHW 66

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD 122
           LQ TG KPI+LMGGGT+ +GDPS RDE+R+++  ++I  N  +I+  F  F+++G G  D
Sbjct: 67  LQATGGKPIALMGGGTTRVGDPSGRDETRKILTVEQIDANKAEIRKTFDRFLRFGEGAND 126

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
           A+M++N  WL  + YI++LR++G  FSVNRMLS +SVR RL+R+Q LSFLEFNYMILQ+Y
Sbjct: 127 AVMVDNAEWLTKLNYIEMLRDVGRHFSVNRMLSMDSVRLRLERDQELSFLEFNYMILQSY 186

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DFVEL + Y C +QMGGSDQWGNI+ GIDLG R+ TP+L+ALT PLLTT+SG KMGKT +
Sbjct: 187 DFVELNRRYGCVMQMGGSDQWGNIVNGIDLGRRMGTPQLYALTCPLLTTSSGAKMGKTAA 246

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKII 302
           GA+WLN EM  PY++WQ+WRN +DADV  F K  T LPM+EI R+A L G EIN AK ++
Sbjct: 247 GAVWLNPEMLKPYDYWQFWRNTEDADVARFLKLFTLLPMAEIARLAALAGSEINAAKTVL 306

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLI--VKAG 360
           ATE T ++HGRE AE AA  A + F     +  +P++++    +  G+G+LT      A 
Sbjct: 307 ATEATALMHGREAAEAAAETARKTFVEGTLAADLPSVTVPSATLEAGLGVLTAFGPEVAK 366

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
              ST+EARR +K   +++N+  +++EK  +   D  + G IKLSFGKK H++  
Sbjct: 367 LVPSTSEARRQIKGGGLRVNDVPVTDEKAVLGRGDVTADGVIKLSFGKKRHVLLR 421


>gi|227111805|ref|ZP_03825461.1| tyrosyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           brasiliensis PBR1692]
          Length = 425

 Score =  519 bits (1337), Expect = e-145,   Method: Composition-based stats.
 Identities = 160/419 (38%), Positives = 231/419 (55%), Gaps = 11/419 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG I Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q 
Sbjct: 4   SNLIKQLQERGLIAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQL 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
           +GHKP++L+GG T +IGDPSF+   R++  ++ + E +EKI+   S F+ +  GK  A+ 
Sbjct: 64  SGHKPVALVGGATGLIGDPSFKATERKLNTAETVGEWVEKIRRQVSPFLDFDCGKNSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYDF 184
            NN  W   +  +D LR+IG  FSVN+M+S E+V+ RL R+   +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGGMNVLDFLRDIGKHFSVNQMISKEAVKQRLNRDDVGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K +D  LQ+GGSDQWGNI  GIDL  R+   +++ LT PL+T + GTK GKT  GA
Sbjct: 184 ASLNKQHDVELQIGGSDQWGNITSGIDLTRRMNQKQVYGLTVPLITKSDGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ---GKEINEAKKI 301
           IWL+   TSPY F+Q+W N  DADV  F K  T + + +ID + +     GK    A+ +
Sbjct: 244 IWLDASKTSPYKFYQFWVNTADADVYRFLKFFTFMSLEDIDALEEEDKNSGKAPR-AQYV 302

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTL 355
           +A E+T MVHG    E A       F  ++          +    +   E+  G  L   
Sbjct: 303 LAEEVTRMVHGEAGLEAARRITQSLFSGALQDMTQDDFAQLAQDGMPIIELENGADLQQA 362

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +V A    S  +AR  + SNA+ IN    ++ +      D        L  GKK++ + 
Sbjct: 363 LVSAELVPSRGQARTMISSNAVTINGEKQADPEYTFSDADRLFDRYTLLRRGKKHYCLI 421


>gi|168182052|ref|ZP_02616716.1| tyrosine--tRNA ligase [Clostridium botulinum Bf]
 gi|237796763|ref|YP_002864315.1| tyrosyl-tRNA synthetase [Clostridium botulinum Ba4 str. 657]
 gi|259516967|sp|C3KUT7|SYY_CLOB6 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|182674819|gb|EDT86780.1| tyrosine--tRNA ligase [Clostridium botulinum Bf]
 gi|229263527|gb|ACQ54560.1| tyrosine--tRNA ligase [Clostridium botulinum Ba4 str. 657]
          Length = 407

 Score =  519 bits (1337), Expect = e-145,   Method: Composition-based stats.
 Identities = 177/406 (43%), Positives = 263/406 (64%), Gaps = 8/406 (1%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +   IL ERG+I Q+++  E+  L  +  ++ YIG+D TA SLH GH  Q+M++  +QK 
Sbjct: 3   NVYDILKERGYIKQLTHEEEIRELLGKEKISFYIGFDPTADSLHVGHFLQMMVMAHMQKA 62

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI+L+GGGT +IGDP+ + + R+MM  ++I+ N    K   +  I +   K  A+M+
Sbjct: 63  GHRPIALVGGGTGMIGDPTGKTDMRKMMTKEQIEYNCNCFKKQLAKIIDFSEDK--AIMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL ++ YI+ LREIG  FSVN+ML+ E  +SRL  E+ LSFLEFNYM++Q YDF+E
Sbjct: 121 NNADWLLNLNYIEFLREIGVHFSVNKMLTAECFKSRL--EKGLSFLEFNYMLMQGYDFLE 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + Y+C +++GG DQW NI+ G+DL  R ++   + +T  LLT + G KMGKT SGA+W
Sbjct: 179 LNRKYNCVMELGGDDQWSNILAGVDLIRRKESKSAYGMTFTLLTNSEGKKMGKTESGALW 238

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           L+ E TSPY F+QYWRN+ DADV    + +T LPM E+ R++ L+G EINEAK+++A E+
Sbjct: 239 LDPEKTSPYEFYQYWRNVADADVEKCLRLITFLPMDEVRRLSSLEGAEINEAKRVLAFEV 298

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHS-QHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           T ++HG EEA+KA  AA   F  +     +MPT  I KD+++    L+ L+ K     S 
Sbjct: 299 TKLIHGEEEAQKAKVAAEALFGGNAKDLGNMPTAYIDKDDLNN--PLVDLLAKCEILPSK 356

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           +EARR +K   + +N+  +++  L +  +     G I +  GKKN 
Sbjct: 357 SEARRLIKQGGLYVNDEKVTDINLVLTEEHVTEDG-IMIRRGKKNF 401


>gi|82777111|ref|YP_403460.1| tyrosyl-tRNA synthetase [Shigella dysenteriae Sd197]
 gi|97201960|sp|Q32FD6|SYY_SHIDS RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|81241259|gb|ABB61969.1| tyrosine tRNA synthetase [Shigella dysenteriae Sd197]
          Length = 424

 Score =  518 bits (1336), Expect = e-145,   Method: Composition-based stats.
 Identities = 162/419 (38%), Positives = 240/419 (57%), Gaps = 11/419 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 4   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +QE ++KI+   + F+ +  G+  A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDCGENSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDF 184
            NN  W  ++  +  LR+IG  FSVN+M++ E+V+ RL RE Q +SF+EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNREDQGISFIEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K Y   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 184 ACLNKQYGVVLQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI   +   K  GK    A+ +
Sbjct: 244 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINALEEEDKNSGKAPR-AQYV 302

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTL 355
           +A ++T +VHG E  + A       F  S+ +      + +    +   E+ +G  L+  
Sbjct: 303 LAEQVTRLVHGEEGLQAAKRITECLFSGSLSALSEADFEQLAQDGVPMVEMEKGADLMQA 362

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +V +    S  +AR+ + SNAI IN    S+ +   K +D        L  GKKN+ + 
Sbjct: 363 LVDSELQPSRGQARKTIASNAITINGEKQSDPEYFFKEEDRLFGRFTLLRRGKKNYCLI 421


>gi|325497175|gb|EGC95034.1| tyrosyl-tRNA synthetase [Escherichia fergusonii ECD227]
          Length = 428

 Score =  518 bits (1336), Expect = e-145,   Method: Composition-based stats.
 Identities = 161/419 (38%), Positives = 239/419 (57%), Gaps = 11/419 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 8   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 67

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +QE ++KI+   + F+ +  G+  A+ 
Sbjct: 68  AGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDCGENSAIA 127

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDF 184
            NN  W  ++  +  LR+IG  FSVN+M++ E+V+ RL RE Q +SF EF+Y +LQ YDF
Sbjct: 128 ANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNREDQGISFTEFSYNLLQGYDF 187

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K Y   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 188 ACLNKLYGVSLQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 247

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI   +   K  GK    A+ +
Sbjct: 248 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINALEEEDKNSGKAPR-AQYV 306

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTL 355
           +A ++T +VHG E  + A       F  S+ +      + +    +   E+ +G  L+  
Sbjct: 307 LAEQVTRLVHGEEGLQAAKRITECLFSGSLSALSEADFEQLAQDGVPMVEMEKGADLMQA 366

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +V +    S  +AR+ + SNA+ IN    S+ +   K +D        L  GKKN+ + 
Sbjct: 367 LVDSELQPSRGQARKTIASNAVTINGEKQSDPEYFFKEEDRLFGRFTLLRRGKKNYCLI 425


>gi|324006993|gb|EGB76212.1| tyrosyl-tRNA synthetase [Escherichia coli MS 57-2]
          Length = 428

 Score =  518 bits (1336), Expect = e-145,   Method: Composition-based stats.
 Identities = 161/419 (38%), Positives = 239/419 (57%), Gaps = 11/419 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 8   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 67

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +QE ++KI+   + F+ +  G+  A+ 
Sbjct: 68  AGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDCGENSAIA 127

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDF 184
            NN  W  ++  +  LR+IG  FSVN+M++ E+V+ RL RE Q +SF EF+Y +LQ YDF
Sbjct: 128 ANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNREDQGISFTEFSYNLLQGYDF 187

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K +   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 188 ACLNKQHGVVLQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 247

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI   +   K  GK    A+ +
Sbjct: 248 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINALEEEDKNSGKAPR-AQYV 306

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTL 355
           +A ++T +VHG E  + A       F  S+ +      + +    +   E+ +G  L+  
Sbjct: 307 LAEQVTRLVHGEEGLQAAKRITECLFSGSLSALSEADFEQLAQDGVPMVEMEKGADLMQA 366

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +V +    S  +AR+ + SNAI IN    S+ +   K +D        L  GKKN+ + 
Sbjct: 367 LVDSELQPSRGQARKTIASNAITINGEKQSDPEYFFKEEDRLFGRFTLLRRGKKNYCLI 425


>gi|26247884|ref|NP_753924.1| tyrosyl-tRNA synthetase [Escherichia coli CFT073]
 gi|91210851|ref|YP_540837.1| tyrosyl-tRNA synthetase [Escherichia coli UTI89]
 gi|117623823|ref|YP_852736.1| tyrosyl-tRNA synthetase [Escherichia coli APEC O1]
 gi|227885946|ref|ZP_04003751.1| tyrosyl-tRNA synthetase [Escherichia coli 83972]
 gi|300995441|ref|ZP_07181093.1| tyrosyl-tRNA synthetase [Escherichia coli MS 45-1]
 gi|301051036|ref|ZP_07197879.1| tyrosyl-tRNA synthetase [Escherichia coli MS 185-1]
 gi|123266072|sp|Q1RBF8|SYY_ECOUT RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|189083651|sp|A1ABI2|SYY_ECOK1 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|26108287|gb|AAN80489.1|AE016761_64 Tyrosyl-tRNA synthetase [Escherichia coli CFT073]
 gi|91072425|gb|ABE07306.1| tyrosyl-tRNA synthetase [Escherichia coli UTI89]
 gi|115512947|gb|ABJ01022.1| tyrosine tRNA synthetase [Escherichia coli APEC O1]
 gi|227837125|gb|EEJ47591.1| tyrosyl-tRNA synthetase [Escherichia coli 83972]
 gi|300297303|gb|EFJ53688.1| tyrosyl-tRNA synthetase [Escherichia coli MS 185-1]
 gi|300406130|gb|EFJ89668.1| tyrosyl-tRNA synthetase [Escherichia coli MS 45-1]
 gi|307626876|gb|ADN71180.1| tyrosyl-tRNA synthetase [Escherichia coli UM146]
 gi|315290584|gb|EFU49958.1| tyrosyl-tRNA synthetase [Escherichia coli MS 153-1]
          Length = 428

 Score =  518 bits (1336), Expect = e-145,   Method: Composition-based stats.
 Identities = 161/419 (38%), Positives = 239/419 (57%), Gaps = 11/419 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 8   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 67

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +QE ++KI+   + F+ +  G+  A+ 
Sbjct: 68  AGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDCGENSAIA 127

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDF 184
            NN  W  ++  +  LR+IG  FSVN+M++ E+V+ RL RE Q +SF EF+Y +LQ YDF
Sbjct: 128 ANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNREDQGISFTEFSYNLLQGYDF 187

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K Y   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 188 ACLNKQYGVVLQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 247

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI   +   K  GK    A+ +
Sbjct: 248 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINALEEEDKNSGKAPR-AQYV 306

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTL 355
           +A ++T +VHG +  + A       F  S+ +      + +    +   E+ +G  L+  
Sbjct: 307 LAEQVTRLVHGEDGLQAAKRITECLFSGSLSALSEADFEQLAQDGVPMVEMEKGADLMQA 366

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +V +    S  +AR+ + SNAI IN    S+ +   K +D        L  GKKN+ + 
Sbjct: 367 LVDSELQPSRGQARKTIASNAITINGEKQSDPEYFFKEEDRLFGRFTLLRRGKKNYCLI 425


>gi|293446013|ref|ZP_06662435.1| tyrosyl-tRNA synthetase [Escherichia coli B088]
 gi|309793403|ref|ZP_07687830.1| tyrosyl-tRNA synthetase [Escherichia coli MS 145-7]
 gi|291322843|gb|EFE62271.1| tyrosyl-tRNA synthetase [Escherichia coli B088]
 gi|308122990|gb|EFO60252.1| tyrosyl-tRNA synthetase [Escherichia coli MS 145-7]
          Length = 428

 Score =  518 bits (1336), Expect = e-145,   Method: Composition-based stats.
 Identities = 163/419 (38%), Positives = 240/419 (57%), Gaps = 11/419 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 8   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 67

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +QE ++KI+   + F+ +  G+  A+ 
Sbjct: 68  AGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDCGENSAIA 127

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDF 184
            NN  W  ++  +  LR+IG  FSVN+M++ E+V+ RL RE Q +SF EF+Y +LQ YDF
Sbjct: 128 ANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNREDQGISFTEFSYNLLQGYDF 187

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K YD  LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 188 ACLNKQYDVVLQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 247

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI   +   K  GK    A+ +
Sbjct: 248 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINALEEEDKNSGKAPR-AQYV 306

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTL 355
           +A ++T +VHG E  + A       F  S+ +      + +    +   E+ +G  L+  
Sbjct: 307 LAEQVTRLVHGEEGLQAAKRITECLFSGSLSALSEADFEQLAQDGVPMVEMEKGADLMQA 366

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +V +    S  +AR+ + SNAI IN    S+ +   K +D        L  GKKN+ + 
Sbjct: 367 LVDSELQPSRGQARKTIASNAITINGEKQSDPEYFFKEEDRLFGRFTLLRRGKKNYCLI 425


>gi|297717908|gb|ADI50097.1| hypothetical protein [Candidatus Odyssella thessalonicensis L13]
          Length = 417

 Score =  518 bits (1335), Expect = e-145,   Method: Composition-based stats.
 Identities = 200/415 (48%), Positives = 276/415 (66%), Gaps = 2/415 (0%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
            KS+FL IL  RGFIHQ ++   LD L +   +TAYIG+D TA+SLH G L Q+M+L WL
Sbjct: 1   MKSEFLQILKSRGFIHQATDMEALDNLANSQSITAYIGFDATANSLHVGSLVQIMMLRWL 60

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           QK GH+P+ LMGGGTS+IGDP+ RD++R ++    IQ NI  I  +F  F+ + +G   A
Sbjct: 61  QKCGHRPLVLMGGGTSMIGDPTGRDDARNLLMDDAIQHNIAGISRVFKKFLNFSSGANAA 120

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           LMLNN  WL  I YI  LR+ G  FSVNRML+F+SV+ RL+REQ LSFLEFNYMILQAYD
Sbjct: 121 LMLNNADWLGEINYIGFLRDFGRHFSVNRMLTFDSVKLRLEREQPLSFLEFNYMILQAYD 180

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+EL + Y C LQMGGSDQWGNI+ G++L  R+   +++ LTSPL+T +SG KMGKT +G
Sbjct: 181 FLELNRRYGCVLQMGGSDQWGNIVNGVELTRRVIGKEVYGLTSPLITNSSGAKMGKTANG 240

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIA 303
           A+WLN +    Y++WQ+WRN +DADV  + +  T L +SEI+++ +LQG EIN AKK++A
Sbjct: 241 AVWLNADRLPAYDYWQFWRNTEDADVGRYLRLFTELELSEIEKLEQLQGSEINHAKKVLA 300

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQ--HMPTISISKDEVSRGMGLLTLIVKAGF 361
              TT+ HG E   +      + F+         +P I IS+ E   G+ +L + V+   
Sbjct: 301 DAATTLAHGAEVLPQIHATITQLFEQGNSGDLSSLPAIEISQAEFENGLPILEVFVQLNL 360

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           A S  EARR ++ N  KIN++ +++  L +     ++ G +KLS GKK H +  +
Sbjct: 361 AASKGEARRLIQGNGAKINDAALTDPNLTVTSSHLNADGMVKLSAGKKRHGVVKI 415


>gi|154483552|ref|ZP_02026000.1| hypothetical protein EUBVEN_01256 [Eubacterium ventriosum ATCC
           27560]
 gi|149735462|gb|EDM51348.1| hypothetical protein EUBVEN_01256 [Eubacterium ventriosum ATCC
           27560]
          Length = 408

 Score =  518 bits (1335), Expect = e-145,   Method: Composition-based stats.
 Identities = 179/409 (43%), Positives = 252/409 (61%), Gaps = 4/409 (0%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L  RG I Q+++   +  L ++G    YIG+D TA SLH GH   L L+  LQ  
Sbjct: 2   NTYEELKARGLIAQVTDEERISDLINKGEAVFYIGFDPTADSLHVGHFMALCLMKRLQMA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           G+KPI+L+GGGT++IGDPS + + R+MM  + I  N+E  K   S FI +  GK  AL++
Sbjct: 62  GNKPIALIGGGTAMIGDPSGKTDMRKMMTKETINHNVECFKKQMSKFIDFSDGK--ALLV 119

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  + YID+LRE+G  FSVNRML+ E  + R++R   LSFLEFNYMI+Q+YDF  
Sbjct: 120 NNADWLLDLNYIDVLREVGPHFSVNRMLTAECYKQRMER--GLSFLEFNYMIMQSYDFYR 177

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L K+Y C LQ GG DQW N++ G +L  R       A+T  LL  + G KMGKT+SGA+W
Sbjct: 178 LYKDYGCNLQFGGDDQWSNMLGGTELIRRKLGEDASAMTITLLLNSEGKKMGKTVSGAVW 237

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           L+ E TSP+ F+QYWRN+DDADVV   K LT LP+ EI++M + QG E+N+AK+I+A E 
Sbjct: 238 LDAEKTSPFEFYQYWRNVDDADVVKCLKMLTFLPLEEIEKMEQWQGSELNKAKEILAYEH 297

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
           T +VHG EEAEKA  A+   F     +  +PT + +K ++  G  +LTL+V    A S  
Sbjct: 298 TKLVHGEEEAEKAQIASRNLFAGGGVTGDIPTTTYAKADLDEGKDILTLLVDTKLAASRG 357

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           EARR ++   + +N   ++         +F+    + +  GKK++    
Sbjct: 358 EARRLVQQGGVSVNGEKVAAIDKTFTTAEFNEEAALLIKKGKKSYHQIK 406


>gi|193064961|ref|ZP_03046037.1| tyrosyl-tRNA synthetase [Escherichia coli E22]
 gi|192927448|gb|EDV82066.1| tyrosyl-tRNA synthetase [Escherichia coli E22]
          Length = 424

 Score =  518 bits (1335), Expect = e-145,   Method: Composition-based stats.
 Identities = 162/419 (38%), Positives = 239/419 (57%), Gaps = 11/419 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 4   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +QE ++KI+   + F+ +  G+  A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDCGENSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDF 184
            NN  W  ++  +  LR+IG  FSVN+M++ E+V+ RL RE Q +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNREDQGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K Y   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 184 ACLNKQYGVVLQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI   +   K  GK    A+ +
Sbjct: 244 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMNIEEINALEEEDKNSGKAPR-AQYV 302

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTL 355
           +A ++T +VHG E  + A       F  S+ +      + +    +   E+ +G  L+  
Sbjct: 303 LAEQVTRLVHGEEGLQAAKRITECLFSGSLSALSEADFEQLAQDGVPMVEMEKGADLMQA 362

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +V +    S  +AR+ + SNAI IN    S+ +   K +D        L  GKKN+ + 
Sbjct: 363 LVDSELQPSRGQARKTIASNAITINGEKQSDPEYFFKEEDRLFGRFTLLRRGKKNYCLI 421


>gi|300939046|ref|ZP_07153740.1| tyrosyl-tRNA synthetase [Escherichia coli MS 21-1]
 gi|300456035|gb|EFK19528.1| tyrosyl-tRNA synthetase [Escherichia coli MS 21-1]
          Length = 428

 Score =  518 bits (1335), Expect = e-145,   Method: Composition-based stats.
 Identities = 161/419 (38%), Positives = 239/419 (57%), Gaps = 11/419 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 8   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 67

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +QE ++KI+   + F+ +  G+  A+ 
Sbjct: 68  AGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDCGENSAIA 127

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDF 184
            NN  W  ++  +  LR+IG  FSVN+M++ E+V+ RL RE Q +SF EF+Y +LQ YDF
Sbjct: 128 ANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNREDQGISFTEFSYNLLQGYDF 187

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K Y   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 188 ACLNKQYGVVLQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 247

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI   +   K  GK    A+ +
Sbjct: 248 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINALEEEDKNSGKAPR-AQYV 306

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTL 355
           +A +++ +VHG E  + A       F  S+ +      + +    +   E+ +G  L+  
Sbjct: 307 LAEQVSRLVHGEEGLQAAKRITECLFSGSLSALSEADFEQLAQDGVPMVEMEKGADLMQA 366

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +V +    S  +AR+ + SNAI IN    S+ +   K +D        L  GKKN+ + 
Sbjct: 367 LVDSELQPSRGQARKTIASNAITINGEKQSDPEYFFKEEDRLFGRFTLLRRGKKNYCLI 425


>gi|289579444|ref|YP_003478071.1| tyrosyl-tRNA synthetase [Thermoanaerobacter italicus Ab9]
 gi|289529157|gb|ADD03509.1| tyrosyl-tRNA synthetase [Thermoanaerobacter italicus Ab9]
          Length = 406

 Score =  518 bits (1335), Expect = e-145,   Method: Composition-based stats.
 Identities = 184/407 (45%), Positives = 259/407 (63%), Gaps = 7/407 (1%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L IL ERG+I Q+++  E+  L  +  VT YIG+D TA SLH GH  Q+M++  +QK G
Sbjct: 3   VLDILQERGYIQQMTHENEIKELLEKEKVTFYIGFDPTADSLHVGHFLQIMVMSHMQKAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+PI L+GGGT+++GDPS R + R+M+  +EI  N E  K      I +  GK  A++ N
Sbjct: 63  HRPIVLIGGGTAMVGDPSGRTDMRKMLTKEEIDRNAEAFKKQMQRLIDFSDGK--AIIAN 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL ++ YI+ LR+IG  FSVNRML+ E  +SRL+R   LSFLEFNYM++QAYDF+EL
Sbjct: 121 NADWLLNLNYIEFLRDIGVHFSVNRMLTAECFKSRLER--GLSFLEFNYMLMQAYDFLEL 178

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            + Y+C +QMGG DQW NII GI+L  + +  + + +T  LLTT+ G KMGKT  GA+WL
Sbjct: 179 NRRYNCVMQMGGDDQWSNIIAGIELIRKKEGKQAYGMTFTLLTTSEGKKMGKTEKGAVWL 238

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           +   TSPY F+QYWRNI DADV      LT LPM E+ R+  L+ KEINEAKKI+A E+T
Sbjct: 239 DPNKTSPYEFYQYWRNIADADVEKALALLTFLPMDEVRRLGALKDKEINEAKKILAYEVT 298

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
            +VHG EEA+K+  AA   F+      ++P++++  D +  G  +L ++ +A    S +E
Sbjct: 299 KLVHGEEEAQKSQKAAEALFEGGGDLNNVPSVTVPSDVL--GKKVLDVLFEAKIIPSKSE 356

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            RR ++   + INN  + +    IK  D     +I +  GKK +   
Sbjct: 357 GRRLIQQGGLYINNEKVESIDEYIK-DDMIKDNSILIRKGKKEYHRL 402


>gi|326391203|ref|ZP_08212747.1| tyrosyl-tRNA synthetase [Thermoanaerobacter ethanolicus JW 200]
 gi|325992772|gb|EGD51220.1| tyrosyl-tRNA synthetase [Thermoanaerobacter ethanolicus JW 200]
          Length = 406

 Score =  518 bits (1334), Expect = e-145,   Method: Composition-based stats.
 Identities = 184/407 (45%), Positives = 259/407 (63%), Gaps = 7/407 (1%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L +L ERG+I Q+++  E+  L  +  +T YIG+D TA SLH GH  Q+M++  +QK G
Sbjct: 3   VLDVLQERGYIQQMTHEEEIRELLEKEKITFYIGFDPTADSLHVGHFLQIMVMSHMQKAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+PI L+GGGT+++GDPS R + R+M+  +EI  N E  K      I +  GK  A+M N
Sbjct: 63  HRPIVLIGGGTAMVGDPSGRTDMRKMLTKEEIDRNAEAFKKQMQRLIDFSNGK--AIMAN 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL ++ YI+ LR+IG  FSVNRML+ E  +SRL+R   LSFLEFNYM++QAYDF+EL
Sbjct: 121 NADWLLNLNYIEFLRDIGVHFSVNRMLTAECFKSRLER--GLSFLEFNYMLMQAYDFLEL 178

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            + Y+C +QMGG DQW NII GI+L  + +  + + +T  LLTT+ G KMGKT  GA+WL
Sbjct: 179 NRRYNCVMQMGGDDQWSNIIAGIELIRKKEGKQAYGMTFTLLTTSEGKKMGKTQKGAVWL 238

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           +   TSPY F+QYWRNI DADV      LT LPM E+ R+  L+ KEINEAKKI+A E+T
Sbjct: 239 DPNKTSPYEFYQYWRNIADADVEKALALLTFLPMDEVRRLGALKDKEINEAKKILAYEVT 298

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
            ++HG EEA KA  AA   F+      ++P++++S D +  G  +L ++ +A    S +E
Sbjct: 299 KLIHGEEEAIKAQKAAEALFESGGDLDNVPSVTVSSDVL--GKKILDVLFEAKIIPSKSE 356

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            RR ++   + INN  + +    IK  D     +I +  GKK +   
Sbjct: 357 GRRLIQQGGLYINNEKVESIDEYIK-DDMIKDNSILIRKGKKEYHRL 402


>gi|194436502|ref|ZP_03068603.1| tyrosyl-tRNA synthetase [Escherichia coli 101-1]
 gi|253773404|ref|YP_003036235.1| tyrosyl-tRNA synthetase [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|254161699|ref|YP_003044807.1| tyrosyl-tRNA synthetase [Escherichia coli B str. REL606]
 gi|194424534|gb|EDX40520.1| tyrosyl-tRNA synthetase [Escherichia coli 101-1]
 gi|242377368|emb|CAQ32114.1| tyrosyl-tRNA synthetase [Escherichia coli BL21(DE3)]
 gi|253324448|gb|ACT29050.1| tyrosyl-tRNA synthetase [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|253973600|gb|ACT39271.1| tyrosyl-tRNA synthetase [Escherichia coli B str. REL606]
 gi|253977795|gb|ACT43465.1| tyrosyl-tRNA synthetase [Escherichia coli BL21(DE3)]
 gi|323962130|gb|EGB57725.1| tyrosyl-tRNA synthetase [Escherichia coli H489]
 gi|323973982|gb|EGB69154.1| tyrosyl-tRNA synthetase [Escherichia coli TA007]
          Length = 424

 Score =  518 bits (1334), Expect = e-145,   Method: Composition-based stats.
 Identities = 161/419 (38%), Positives = 239/419 (57%), Gaps = 11/419 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 4   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +QE ++KI+   + F+ +  G+  A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDCGENSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDF 184
            NN  W  ++  +  LR+IG  FSVN+M++ E+V+ RL RE Q +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNREDQGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K Y   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 184 ACLNKQYGVVLQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI   +   K  GK    A+ +
Sbjct: 244 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINALEEEDKNSGKAPR-AQYV 302

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTL 355
           +A ++T +VHG E  + A       F  S+ +      + +    +   E+ +G  L+  
Sbjct: 303 LAEQVTRLVHGEEGLQAAKRITECLFSGSLSALSEADFEQLAQDGVPMVEMEKGADLMQA 362

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +V +    S  +AR+ + SNAI IN    S+ +   K ++        L  GKKN+ + 
Sbjct: 363 LVDSELQPSRGQARKTIASNAITINGEKQSDPEYFFKEEERLFGRFTLLRRGKKNYCLI 421


>gi|323956648|gb|EGB52385.1| tyrosyl-tRNA synthetase [Escherichia coli H263]
          Length = 424

 Score =  518 bits (1334), Expect = e-145,   Method: Composition-based stats.
 Identities = 161/419 (38%), Positives = 239/419 (57%), Gaps = 11/419 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 4   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +QE ++KI+   + F+ +  G+  A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDCGENSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDF 184
            NN  W  ++  +  LR+IG  FSVN+M++ E+V+ RL RE Q +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNREDQGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K Y   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 184 ACLNKQYGVVLQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI   +   K  GK    A+ +
Sbjct: 244 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINALEEEDKNSGKAPR-AQYV 302

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTL 355
           +A ++T +VHG +  + A       F  S+ +      + +    +   E+ +G  L+  
Sbjct: 303 LAEQVTRLVHGEDGLQAAKRITECLFSGSLSALSEADFEQLAQDGVPMVEMEKGADLMQA 362

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +V +    S  +AR+ + SNAI IN    S+ +   K +D        L  GKKN+ + 
Sbjct: 363 LVDSELQPSRGQARKTIASNAITINGEKQSDPEYFFKEEDRLFGCFTLLRRGKKNYCLI 421


>gi|297545587|ref|YP_003677889.1| tyrosyl-tRNA synthetase [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
 gi|296843362|gb|ADH61878.1| tyrosyl-tRNA synthetase [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
          Length = 406

 Score =  518 bits (1334), Expect = e-145,   Method: Composition-based stats.
 Identities = 183/407 (44%), Positives = 259/407 (63%), Gaps = 7/407 (1%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L +L ERG+I Q+++  E+  L  +  VT YIG+D TA SLH GH  Q+M++  +QK G
Sbjct: 3   VLDVLQERGYIQQMTHENEIKELLEKEKVTFYIGFDPTADSLHVGHFLQIMVMSHMQKAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+PI L+GGGT+++GDPS R + R+M+  +EI  N E  K      I +  GK  A++ N
Sbjct: 63  HRPIVLIGGGTAMVGDPSGRTDMRKMLTKEEINRNAEAFKKQMQRLIDFSDGK--AIIAN 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL ++ YI+ LR+IG  FSVNRML+ E  +SRL+R   LSFLEFNYM++QAYDF+EL
Sbjct: 121 NADWLLNLNYIEFLRDIGVHFSVNRMLTAECFKSRLER--GLSFLEFNYMLMQAYDFLEL 178

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            + Y+C +QMGG DQW NII GI+L  + +  + + +T  LLTT+ G KMGKT  GA+WL
Sbjct: 179 NRRYNCVMQMGGDDQWSNIIAGIELIRKKEGKQAYGMTFTLLTTSEGKKMGKTEKGAVWL 238

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           +   TSPY F+QYWRNI DADV      LT LPM E+ R+  L+ KEINEAKKI+A E+T
Sbjct: 239 DPNKTSPYEFYQYWRNIADADVEKALALLTFLPMDEVRRLGALKDKEINEAKKILAYEVT 298

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
            +VHG EEA+K+  AA   F+      ++P++++  D +  G  +L ++ +A    S +E
Sbjct: 299 KLVHGEEEAQKSQKAAEALFEGGGDLNNVPSVTVPSDVL--GKKVLDVLFEAKIIPSKSE 356

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            RR ++   + INN  + +    IK  D     +I +  GKK +   
Sbjct: 357 GRRLIQQGGLYINNEKVESIDEYIK-DDMIKDNSILIRKGKKEYHRL 402


>gi|254437877|ref|ZP_05051371.1| tyrosyl-tRNA synthetase [Octadecabacter antarcticus 307]
 gi|198253323|gb|EDY77637.1| tyrosyl-tRNA synthetase [Octadecabacter antarcticus 307]
          Length = 427

 Score =  518 bits (1334), Expect = e-145,   Method: Composition-based stats.
 Identities = 218/413 (52%), Positives = 294/413 (71%), Gaps = 3/413 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KSDF+ ++ ERGF+   ++ + LD   + GVV AYIG+D TA SLH G L Q+M+L WLQ
Sbjct: 16  KSDFIRVMMERGFLADCTDYQGLDDAFAAGVVPAYIGFDATAKSLHVGSLIQIMMLRWLQ 75

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD-A 123
           KTGH+PI+LMGGGT+ +GDPSFR + R ++   +I +NI  IK +F+++IKY TG+ + A
Sbjct: 76  KTGHQPITLMGGGTTKVGDPSFRADERPLLTPDKIDDNISGIKKVFAAYIKYDTGQPNSA 135

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           LMLNN  WL  + Y+D LR+IG  FSVNRMLSFESV+SRL REQSLSFLEFNYMILQAYD
Sbjct: 136 LMLNNAEWLDDLNYLDFLRDIGKHFSVNRMLSFESVKSRLDREQSLSFLEFNYMILQAYD 195

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+EL + Y C+LQMGGSDQWGNI+ GIDL  R+   ++F LTSPLLTT+ G KMGK+LSG
Sbjct: 196 FLELNRRYGCKLQMGGSDQWGNIVNGIDLTRRVLDHQIFGLTSPLLTTSDGKKMGKSLSG 255

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIA 303
           AIWLN EM S Y FWQ+WRN  D+DV  F K  T LP++E DR+  L+G +IN AK ++A
Sbjct: 256 AIWLNDEMLSSYEFWQFWRNTTDSDVGRFLKLYTELPVAECDRLGALEGADINGAKIVLA 315

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
            E+TT++HG++ A+ A   A E F+       +PT++++  ++  G+ ++ LIVK+G A 
Sbjct: 316 NEVTTLLHGKDAAQAAEKTAKEVFEKGGIGDDLPTLTLAASDLVDGISIVQLIVKSGLAG 375

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           S  EA+R +     KIN+ ++++    I   D ++   IKLS GKK H +  L
Sbjct: 376 SGKEAKRLISDGGAKINDDMLTDAGRMITAADLETP--IKLSAGKKRHALVQL 426


>gi|253688754|ref|YP_003017944.1| tyrosyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|259517008|sp|C6DK25|SYY_PECCP RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|251755332|gb|ACT13408.1| tyrosyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           carotovorum PC1]
          Length = 425

 Score =  517 bits (1333), Expect = e-145,   Method: Composition-based stats.
 Identities = 159/419 (37%), Positives = 229/419 (54%), Gaps = 11/419 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG I Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q 
Sbjct: 4   SNLIKQLQERGLIAQVTDEGALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQL 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++  +  + E +EKI+   S F+ +  GK  A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKATERKLNTADTVGEWVEKIRRQVSPFLDFDCGKNSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYDF 184
            NN  W   +  +D LR+IG  FSVN+M++ E+V+ RL R+   +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGGMNVLDFLRDIGKHFSVNQMINKEAVKQRLNRDDVGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K +D  LQ+GGSDQWGNI  GIDL  R+   +++ LT PL+T + GTK GKT  GA
Sbjct: 184 ASLNKQHDVELQIGGSDQWGNITSGIDLTRRMNQKQVYGLTVPLITKSDGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ---GKEINEAKKI 301
           IWL+   TSPY F+Q+W N  DADV  F K  T + + +ID + +     GK    A+ +
Sbjct: 244 IWLDASKTSPYKFYQFWINTADADVYRFLKFFTFMSLEDIDALEEEDKNSGKAPR-AQYV 302

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTL 355
           +A E+T MVHG    E A       F  ++          +    +   E+  G  L   
Sbjct: 303 LAEEVTRMVHGEAGLEAARRITQSLFSGALQDMTQDDFAQLAQDGMPIIELENGADLQQA 362

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +V A    S  +AR  + SNA+ IN    ++ +      D        L  GKK++ + 
Sbjct: 363 LVSAELVPSRGQARTMISSNAVTINGEKQADPEYTFSASDRLFDRYTLLRRGKKHYCLI 421


>gi|332090773|gb|EGI95865.1| tyrosyl-tRNA synthetase [Shigella boydii 5216-82]
          Length = 424

 Score =  517 bits (1333), Expect = e-145,   Method: Composition-based stats.
 Identities = 162/419 (38%), Positives = 239/419 (57%), Gaps = 11/419 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 4   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +QE ++KI+   + F+ +  G+  A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDCGENSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDF 184
            NN  W  ++  +  LR+IG  FSVN+M++ E+V+ RL RE Q +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNREDQGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K YD  LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 184 ACLNKQYDVVLQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  D DV  F K  T + + EI   +   K  GK    A+ +
Sbjct: 244 VWLDPKKTSPYKFYQFWINTADVDVYRFLKFFTFMSIEEINALEEEDKNSGKAPR-AQYV 302

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTL 355
           +A ++T +VHG E  + A       F  S+ +      + +    +   E+ +G  L+  
Sbjct: 303 LAEQVTRLVHGEEGLQAAKRITECLFSGSLSALSEADFEQLAQDGVPMVEMEKGADLMQA 362

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +V +    S  +AR+ + SNAI IN    S+ +   K +D        L  GKKN+ + 
Sbjct: 363 LVDSELQPSRGQARKTIASNAITINGEKQSDPEYFFKEEDRLFGRFTLLRRGKKNYCLI 421


>gi|307266340|ref|ZP_07547879.1| tyrosyl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1]
 gi|306918647|gb|EFN48882.1| tyrosyl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1]
          Length = 406

 Score =  517 bits (1333), Expect = e-144,   Method: Composition-based stats.
 Identities = 183/407 (44%), Positives = 259/407 (63%), Gaps = 7/407 (1%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L +L ERG+I Q+++  E+  L  +  +T YIG+D TA SLH GH  Q+M++  +QK G
Sbjct: 3   VLDVLQERGYIQQMTHEEEIRELLEKEKITFYIGFDPTADSLHVGHFLQIMVMSHMQKAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+PI L+GGGT+++GDPS R + R+M+  +EI  N E  K      I +  GK  A+M N
Sbjct: 63  HRPIVLIGGGTAMVGDPSGRTDMRKMLTKEEIDRNAEAFKKQMQRLIDFSDGK--AIMAN 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL ++ YI+ LR+IG  FSVNRML+ E  +SRL+R   LSFLEFNYM++QAYDF+EL
Sbjct: 121 NADWLLNLNYIEFLRDIGVHFSVNRMLTAECFKSRLER--GLSFLEFNYMLMQAYDFLEL 178

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            + Y+C +QMGG DQW NII GI+L  + +  + + +T  LLTT+ G KMGKT  GA+WL
Sbjct: 179 NRRYNCVMQMGGDDQWSNIIAGIELIRKKEGKQAYGMTFTLLTTSEGKKMGKTQKGAVWL 238

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           +   TSPY F+QYWRNI DADV      LT LPM E+ R+  L+ KEINEAKKI+A E+T
Sbjct: 239 DPNKTSPYEFYQYWRNIADADVEKALALLTFLPMDEVRRLGALKDKEINEAKKILAYEVT 298

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
            ++HG EEA KA  AA   F+      ++P++++S D +  G  +L ++ +A    S +E
Sbjct: 299 KLIHGEEEAIKAQKAAEALFESGGDLDNVPSVTVSSDVL--GKKILDVLFEAKIIPSKSE 356

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            RR ++   + INN  + +    IK +      +I +  GKK +   
Sbjct: 357 GRRLIQQGGLYINNEKVESIDEYIKDE-MIKDNSILIRKGKKEYHRL 402


>gi|195939027|ref|ZP_03084409.1| tyrosyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4024]
          Length = 428

 Score =  517 bits (1333), Expect = e-144,   Method: Composition-based stats.
 Identities = 162/419 (38%), Positives = 239/419 (57%), Gaps = 11/419 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 8   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 67

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +QE ++KI+   + F+ +  G+  A+ 
Sbjct: 68  AGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDCGENSAIA 127

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDF 184
            NN  W  ++  +  LR+IG  FSVN+M++ E+V+ RL RE Q +SF EF+Y +LQ YDF
Sbjct: 128 ANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNREDQGISFTEFSYNLLQGYDF 187

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K Y   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 188 ACLNKQYGVVLQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 247

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI   +   K  GK    A+ +
Sbjct: 248 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINALEEEDKNSGKAPR-AQYV 306

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTL 355
           +A ++T +VHG E  + A       F  S+ +      + +    +   E+ +G  L+  
Sbjct: 307 LAEQVTRLVHGEEGLQAAKRITECLFSGSLSALSEADFEQLVQDGLPMVEIEKGADLMQA 366

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +V +    S  +AR+ + SNAI IN    S+ +   K +D        L  GKKN+ + 
Sbjct: 367 MVDSELQPSRGQARKTIASNAITINGEKQSDPEYFFKEEDRLFGRFTLLRRGKKNYCLI 425


>gi|194426117|ref|ZP_03058673.1| tyrosyl-tRNA synthetase [Escherichia coli B171]
 gi|194416172|gb|EDX32438.1| tyrosyl-tRNA synthetase [Escherichia coli B171]
          Length = 424

 Score =  517 bits (1333), Expect = e-144,   Method: Composition-based stats.
 Identities = 161/419 (38%), Positives = 237/419 (56%), Gaps = 11/419 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 4   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +QE ++KI+   + F+ +  G+  A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDCGENSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDF 184
            NN  W  ++  +  LR+IG  FSVN+M++ E+V+ RL RE Q +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNREDQGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K Y   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 184 ACLNKQYGVVLQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI   +   K  GK     + +
Sbjct: 244 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINALEEEDKNSGKAPR-VQYV 302

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTL 355
           +A  +T +VHG E  + A       F  S+ +      + +    +   E+ +G  L+  
Sbjct: 303 LAELVTRLVHGEEGLQAAKRITECLFSGSLSALSEADFEQLAQDGVPMVEMEKGADLMQA 362

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +V +    S  +AR+ + SNAI IN    S+ +   K +D        L  GKKN+ + 
Sbjct: 363 LVDSELQPSRGQARKTIASNAITINGEKQSDPEYFFKEEDRLFGRFTLLRRGKKNYCLI 421


>gi|167040949|ref|YP_001663934.1| tyrosyl-tRNA synthetase [Thermoanaerobacter sp. X514]
 gi|256751928|ref|ZP_05492799.1| tyrosyl-tRNA synthetase [Thermoanaerobacter ethanolicus CCSD1]
 gi|300913840|ref|ZP_07131157.1| tyrosyl-tRNA synthetase [Thermoanaerobacter sp. X561]
 gi|307725474|ref|YP_003905225.1| tyrosyl-tRNA synthetase [Thermoanaerobacter sp. X513]
 gi|166855189|gb|ABY93598.1| tyrosyl-tRNA synthetase [Thermoanaerobacter sp. X514]
 gi|256749233|gb|EEU62266.1| tyrosyl-tRNA synthetase [Thermoanaerobacter ethanolicus CCSD1]
 gi|300890525|gb|EFK85670.1| tyrosyl-tRNA synthetase [Thermoanaerobacter sp. X561]
 gi|307582535|gb|ADN55934.1| tyrosyl-tRNA synthetase [Thermoanaerobacter sp. X513]
          Length = 406

 Score =  517 bits (1333), Expect = e-144,   Method: Composition-based stats.
 Identities = 182/407 (44%), Positives = 259/407 (63%), Gaps = 7/407 (1%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L +L ERG+I Q+++  E+  L  +  +T YIG+D TA SLH GH  Q+M++  +QK G
Sbjct: 3   VLDVLQERGYIQQMTHEEEIRELLEKEKITFYIGFDPTADSLHVGHFLQIMVMSHMQKAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+PI L+GGGT+++GDPS R + R+++  +EI  N E  K      I +  GK  A+M N
Sbjct: 63  HRPIVLIGGGTAMVGDPSGRTDMRKILTREEINRNAEAFKKQMQRLIDFSDGK--AIMAN 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL ++ YI+ LR+IG  FSVNRML+ E  +SRL+R   LSFLEFNYM++QAYDF+EL
Sbjct: 121 NADWLLNLNYIEFLRDIGVHFSVNRMLTAECFKSRLER--GLSFLEFNYMLMQAYDFLEL 178

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            K Y+C +QMGG DQW NII GI+L  + +  + + +T  LLTT+ G KMGKT  GA+WL
Sbjct: 179 NKRYNCVMQMGGDDQWSNIIAGIELIRKKEGKQAYGMTFTLLTTSEGKKMGKTEKGAVWL 238

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           +   TSPY F+QYWRNI DADV      LT LPM E+ R+  L+ KEINEAKK++A E+T
Sbjct: 239 DPNKTSPYEFYQYWRNIADADVEKALALLTFLPMDEVRRLGALKDKEINEAKKVLAYEVT 298

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
            ++HG EEA KA  AA   F+      ++P++++S D +  G  +L ++ +A    S +E
Sbjct: 299 KLIHGEEEAIKAQKAAEALFESGGDLDNVPSVTVSSDVL--GKKILDVLFEAKIIPSKSE 356

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            RR ++   + INN  + +    IK  +     +I +  GKK +   
Sbjct: 357 GRRLIQQGGLYINNEKVESVDEYIK-DNMIKDDSILIRKGKKEYHRL 402


>gi|237705581|ref|ZP_04536062.1| tyrosyl-tRNA synthetase [Escherichia sp. 3_2_53FAA]
 gi|226900338|gb|EEH86597.1| tyrosyl-tRNA synthetase [Escherichia sp. 3_2_53FAA]
 gi|315286333|gb|EFU45769.1| tyrosyl-tRNA synthetase [Escherichia coli MS 110-3]
          Length = 428

 Score =  517 bits (1333), Expect = e-144,   Method: Composition-based stats.
 Identities = 161/419 (38%), Positives = 239/419 (57%), Gaps = 11/419 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 8   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 67

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +QE ++KI+   + F+ +  G+  A+ 
Sbjct: 68  AGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDCGENSAIA 127

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDF 184
            NN  W  ++  +  LR+IG  FSVN+M++ E+V+ RL RE Q +SF EF+Y +LQ YDF
Sbjct: 128 ANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNREDQGISFTEFSYNLLQGYDF 187

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K Y   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 188 ACLNKQYGVVLQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 247

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI   +   K  GK    A+ +
Sbjct: 248 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINALEEEDKNSGKAPR-AQYV 306

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTL 355
           +A ++T +VHG +  + A       F  S+ +      + +    +   E+ +G  L+  
Sbjct: 307 LAEQVTRLVHGEDGLQAAKRITECLFSGSLSALSEADFEQLAQDGVPMVEMEKGADLMQA 366

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +V +    S  +AR+ + SNAI IN    S+ +   K +D        L  GKKN+ + 
Sbjct: 367 LVDSELQPSRGQARKTIASNAITINGEKQSDPEYFFKEEDRLFGCFTLLRRGKKNYCLI 425


>gi|300930899|ref|ZP_07146266.1| tyrosyl-tRNA synthetase [Escherichia coli MS 187-1]
 gi|300461259|gb|EFK24752.1| tyrosyl-tRNA synthetase [Escherichia coli MS 187-1]
          Length = 428

 Score =  517 bits (1333), Expect = e-144,   Method: Composition-based stats.
 Identities = 161/419 (38%), Positives = 239/419 (57%), Gaps = 11/419 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 8   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 67

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +QE ++KI+   + F+ +  G+  A+ 
Sbjct: 68  AGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDCGENSAIA 127

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDF 184
            NN  W  ++  +  LR+IG  FSVN+M++ E+V+ RL RE Q +SF EF+Y +LQ YDF
Sbjct: 128 ANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNREDQGISFTEFSYNLLQGYDF 187

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K Y   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 188 ACLNKQYGVVLQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 247

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI   +   K  GK    A+ +
Sbjct: 248 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINALEEEDKNSGKAPR-AQYV 306

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTL 355
           +A ++T +VHG E  + A       F  S+ +      + +    +   E+ +G  L+  
Sbjct: 307 LAEQVTRLVHGEEGLQAAKRITECLFSGSLSALSEADFEQLAQDGVPMVEMEKGADLMQA 366

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +V +    S  +AR+ + SNAI IN    S+ +   K ++        L  GKKN+ + 
Sbjct: 367 LVDSELQPSRGQARKTIASNAITINGEKQSDPEYFFKEEERLFGRFTLLRRGKKNYCLI 425


>gi|83312134|ref|YP_422398.1| tyrosyl-tRNA synthetase [Magnetospirillum magneticum AMB-1]
 gi|97201574|sp|Q2W2T6|SYY_MAGMM RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|82946975|dbj|BAE51839.1| Tyrosyl-tRNA synthetase [Magnetospirillum magneticum AMB-1]
          Length = 415

 Score =  517 bits (1332), Expect = e-144,   Method: Composition-based stats.
 Identities = 219/415 (52%), Positives = 289/415 (69%), Gaps = 2/415 (0%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M + KSDFL I++ERG++HQ ++   LD   ++G   AYIG+D TA+SLH G L Q+MLL
Sbjct: 1   MTSLKSDFLRIVTERGYMHQCTDLEALDKRLTEGCQAAYIGFDCTATSLHVGGLMQIMLL 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            W QKTGHKPI LMGGGT+ IGDP+ +DESR+M+  + I  N+  IK +F+ ++ +G GK
Sbjct: 61  RWWQKTGHKPIVLMGGGTTRIGDPTGKDESRKMLTDEVIATNMAGIKTVFTKYLTFGEGK 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           TDALM+NN  WL  + YID LR+ G  F++NRML+F+SV+ RL+REQ L+FLEFNYM+LQ
Sbjct: 121 TDALMVNNADWLDKLNYIDFLRDYGHHFTINRMLTFDSVKLRLEREQPLTFLEFNYMLLQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
            YDFVEL +   C LQMGGSDQWGNII G++LG R    +LF LTSPLLTT+SG KMGKT
Sbjct: 181 GYDFVELFRRNRCILQMGGSDQWGNIINGVELGRRADQAELFGLTSPLLTTSSGAKMGKT 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           ++GA+WLN +M S + FWQYWRN +DADV  F K  T LP+ EI R+ KL+G EINEAKK
Sbjct: 241 VNGAVWLNDDMLSAWEFWQYWRNTEDADVGRFLKLYTELPLDEIARLEKLEGAEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+A E+T + HG   A +AA  A + F+  + S  +PT+ I   E++ G+    L V+AG
Sbjct: 301 ILANEVTRLCHGDAAALQAAETARQTFEQGVASSDLPTVEIPAAELAAGIPAFALFVRAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            A S  EARR LK    K+N+  + +E   +   D    G +KL+ GKK HI+  
Sbjct: 361 LAASNGEARRLLKGGGGKVNDQAV-DEAHPVGSNDL-RDGAVKLTAGKKRHILVK 413


>gi|301326605|ref|ZP_07219942.1| tyrosyl-tRNA synthetase [Escherichia coli MS 78-1]
 gi|300846722|gb|EFK74482.1| tyrosyl-tRNA synthetase [Escherichia coli MS 78-1]
          Length = 428

 Score =  517 bits (1332), Expect = e-144,   Method: Composition-based stats.
 Identities = 162/419 (38%), Positives = 239/419 (57%), Gaps = 11/419 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 8   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 67

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +QE ++KI+   + F+ +  G+  A+ 
Sbjct: 68  AGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDCGENSAIA 127

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDF 184
            NN  W  ++  +  LR+IG  FSVN+M++ E+V+ RL RE Q +SF EF+Y +LQ YDF
Sbjct: 128 ANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNREDQGISFTEFSYNLLQGYDF 187

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K Y   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 188 ACLNKQYGVVLQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEDGA 247

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI   +   K  GK    A+ +
Sbjct: 248 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINALEEEDKNSGKAPR-AQYV 306

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTL 355
           +A ++T +VHG E  + A       F  S+ +      + +    +   E+ +G  L+  
Sbjct: 307 LAEQVTRLVHGEEGLQAAKRITECLFSGSLSALSEADFEQLAQDGVPMVEMEKGADLMQA 366

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +V +    S  +AR+ + SNAI IN    S+ +   K +D        L  GKKN+ + 
Sbjct: 367 LVDSELQPSRGQARKTIASNAITINGEKQSDPEYFFKEEDRLFGRFTLLRRGKKNYCLI 425


>gi|207857047|ref|YP_002243698.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|254783629|sp|B5QV10|SYY_SALEP RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|206708850|emb|CAR33180.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
          Length = 424

 Score =  517 bits (1332), Expect = e-144,   Method: Composition-based stats.
 Identities = 161/419 (38%), Positives = 236/419 (56%), Gaps = 11/419 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG V  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 4   SNLIKQLQERGLVAQVTDEDALAERLAQGPVALYCGFDPTADSLHLGHLVPLLCLKRFQQ 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +QE + KI+   + F+ +  G+  A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVAKIRKQVAPFLDFDCGENSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDF 184
            NN  W  S+  +  LR+IG  FSVN+M++ E+V+ RL R +Q +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGSMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDQGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K +   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 184 ACLNKLHGVALQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI   +   K  GK    A+ +
Sbjct: 244 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMDIEEINALEEEDKNSGKAPR-AQYV 302

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTL 355
           +A ++T +VHG E    A       F  S+ +      + +    +   E+ +G  L+  
Sbjct: 303 LAEQVTRLVHGEEGLVAAKRITECLFSGSLSALSEADFEQLAQDGVPMVEMEKGADLMQA 362

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +V A    S  +AR+ + SNA+ IN    S+ +     +D        L  GKKN+ + 
Sbjct: 363 LVDAELQPSRGQARKTIASNAVTINGEKQSDPEYIFNDEDRLFGRYTLLRRGKKNYCLI 421


>gi|320197821|gb|EFW72429.1| tyrosyl-tRNA synthetase [Escherichia coli EC4100B]
          Length = 424

 Score =  517 bits (1332), Expect = e-144,   Method: Composition-based stats.
 Identities = 161/419 (38%), Positives = 239/419 (57%), Gaps = 11/419 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 4   SNLIKQLQERGLVAQVTDEEALVERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +QE ++KI+   + F+ +  G+  A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDCGENSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDF 184
            NN  W  ++  +  LR+IG  FSVN+M++ E+V+ RL RE Q +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNREDQGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K Y   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 184 ACLNKQYGVVLQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI   +   K  GK    A+ +
Sbjct: 244 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINALEEEDKNSGKAPR-AQYV 302

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTL 355
           +A ++T +VHG E  + A       F  S+ +      + +    +   ++ +G  L+  
Sbjct: 303 LAEQVTRLVHGEEGLQAAKRITECLFSGSLSALSEADFEQLAQDGVPMVKMEKGADLMQA 362

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +V +    S  +AR+ + SNAI IN    S+ +   K +D        L  GKKN+ + 
Sbjct: 363 LVDSELQPSRGQARKTIASNAITINGEKQSDPEYFFKEEDRLFGRFTLLRRGKKNYCLI 421


>gi|288935193|ref|YP_003439252.1| tyrosyl-tRNA synthetase [Klebsiella variicola At-22]
 gi|288889902|gb|ADC58220.1| tyrosyl-tRNA synthetase [Klebsiella variicola At-22]
          Length = 424

 Score =  517 bits (1332), Expect = e-144,   Method: Composition-based stats.
 Identities = 160/419 (38%), Positives = 236/419 (56%), Gaps = 11/419 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 4   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++     +QE ++KI+   + F+ +  G   A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTEDTVQEWVDKIRKQVAPFLDFDCGDNSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDF 184
            NN  W  S+  +  LR+IG  FSVN+M++ E+V+ RL R +Q +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGSMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDQGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K +   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 184 ACLNKLHGVALQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + M+EI   +   K  GK    A+ +
Sbjct: 244 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMDMAEINALEEEDKNSGKAPR-AQYV 302

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTL 355
           +A ++T +VHG E  E A       F+ ++        + +    +   E+ +G  LL  
Sbjct: 303 LAEQVTRLVHGEEGLEAAKRITESLFNGNLSDLSEADFEQLAQDGVPMIEMEKGADLLQA 362

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +V +    S  +AR+ + SNA+ IN    ++ +      D        L  GKKN+ + 
Sbjct: 363 LVDSELQPSRGQARKTVASNAVTINGEKQADPEYVFSDSDRLFGRYTLLRRGKKNYCLV 421


>gi|46202551|ref|ZP_00053020.2| COG0162: Tyrosyl-tRNA synthetase [Magnetospirillum magnetotacticum
           MS-1]
          Length = 415

 Score =  517 bits (1332), Expect = e-144,   Method: Composition-based stats.
 Identities = 218/415 (52%), Positives = 289/415 (69%), Gaps = 2/415 (0%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M + KSDFL I++ERG++HQ ++   LD   ++G   AYIG+D TA+SLH G L Q+MLL
Sbjct: 1   MTSLKSDFLRIVTERGYMHQCTDLEALDKRLTEGCQAAYIGFDCTATSLHVGGLMQIMLL 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            W QKTGHKPI LMGGGT+ IGDP+ +DESR+M+  + I  N+  IK +F+ ++ +G G+
Sbjct: 61  RWWQKTGHKPIVLMGGGTTRIGDPTGKDESRKMLTDEVIATNMAGIKTVFTKYLTFGDGQ 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           TDALM+NN  WL  + YID LR+ G  F++NRML+F+SV+ RL+REQ L+FLEFNYM+LQ
Sbjct: 121 TDALMVNNADWLDKLNYIDFLRDYGHHFTINRMLTFDSVKLRLEREQPLTFLEFNYMLLQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
            YDFVEL +   C LQMGGSDQWGNII G++LG R    +LF LTSPLLTT+SG KMGKT
Sbjct: 181 GYDFVELYRRNKCILQMGGSDQWGNIINGVELGRRADQAELFGLTSPLLTTSSGAKMGKT 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           ++GA+WLN +M S + FWQYWRN +DADV  F K  T LP+ EI R+ KL+G EINEAKK
Sbjct: 241 VNGAVWLNDDMLSAWEFWQYWRNTEDADVGRFLKLYTELPLDEIARLEKLEGAEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+A E+T + HG   A +AA  A + F+  + +  +PTI I   E++ G+    L V+AG
Sbjct: 301 ILANEVTRLCHGEAAAIQAAETARKTFEEGMAATDLPTIEIPAAELAAGIPAFALFVRAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            A S  EARR LK    K+N+  + +E   +   D    G +KL+ GKK HI+  
Sbjct: 361 LAASNGEARRLLKGGGGKVNDQAV-DEARPVGSADL-KDGAVKLTAGKKRHILVK 413


>gi|167036539|ref|YP_001664117.1| tyrosyl-tRNA synthetase [Thermoanaerobacter pseudethanolicus ATCC
           33223]
 gi|320114971|ref|YP_004185130.1| tyrosyl-tRNA synthetase [Thermoanaerobacter brockii subsp. finnii
           Ako-1]
 gi|166855373|gb|ABY93781.1| tyrosyl-tRNA synthetase [Thermoanaerobacter pseudethanolicus ATCC
           33223]
 gi|319928062|gb|ADV78747.1| tyrosyl-tRNA synthetase [Thermoanaerobacter brockii subsp. finnii
           Ako-1]
          Length = 406

 Score =  517 bits (1331), Expect = e-144,   Method: Composition-based stats.
 Identities = 185/406 (45%), Positives = 259/406 (63%), Gaps = 7/406 (1%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L +L ERG+I Q+++  E+  L  +  +T YIG+D TA SLH GH  Q+M++  +QK GH
Sbjct: 4   LDVLQERGYIQQMTHEEEIRELLEKEKITFYIGFDPTADSLHVGHFLQIMVMSHMQKAGH 63

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           +PI L+GGGT+++GDPS R + R+M+  +EI  N E  K      I +  GK  A+M NN
Sbjct: 64  RPIVLIGGGTAMVGDPSGRTDMRKMLTKEEINRNAEAFKKQMQRLIDFSDGK--AIMANN 121

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL ++ YI+ LR+IG  FSVNRML+ E  +SRL+R   LSFLEFNYM++QAYDF+EL 
Sbjct: 122 ADWLLNLNYIEFLRDIGVHFSVNRMLTAECFKSRLER--GLSFLEFNYMLMQAYDFLELN 179

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
           K Y+C +QMGG DQW NII GI+L  + +  + + +T  LLTT+ G KMGKT  GA+WL+
Sbjct: 180 KRYNCVMQMGGDDQWSNIIAGIELIRKKEGKQAYGMTFTLLTTSEGKKMGKTQKGAVWLD 239

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITT 308
              TSPY F+QYWRNI DADV      LT LPM E+ R+  L+ KEINEAKKI+A E+T 
Sbjct: 240 PNKTSPYEFYQYWRNIADADVEKALALLTFLPMDEVRRLGALKDKEINEAKKILAYEVTK 299

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
           ++HG EEA KA  AA   F+      ++P++++S D +  G  +L ++ +A    S +E 
Sbjct: 300 LIHGEEEAIKAQKAAEALFESGGDLDNVPSVTVSSDVL--GKKILDVLFEAKIIPSKSEG 357

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           RR ++   + INN  + +    IK  D     +I +  GKK +   
Sbjct: 358 RRLVQQGGLYINNEKVESIDEYIK-DDMIKDNSILIRKGKKEYHRL 402


>gi|16760464|ref|NP_456081.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. CT18]
 gi|16764797|ref|NP_460412.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|29141776|ref|NP_805118.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|56413582|ref|YP_150657.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|62180037|ref|YP_216454.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|161614133|ref|YP_001588098.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi B str. SPB7]
 gi|167551581|ref|ZP_02345335.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA29]
 gi|167994279|ref|ZP_02575371.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
 gi|168229823|ref|ZP_02654881.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Kentucky str. CDC 191]
 gi|168235521|ref|ZP_02660579.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
 gi|168463140|ref|ZP_02697071.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Newport str. SL317]
 gi|168819199|ref|ZP_02831199.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|194443795|ref|YP_002040698.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Newport str. SL254]
 gi|194448037|ref|YP_002045487.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL476]
 gi|194469349|ref|ZP_03075333.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|194735512|ref|YP_002114461.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. CVM19633]
 gi|197248693|ref|YP_002146596.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
 gi|197261628|ref|ZP_03161702.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA23]
 gi|197362506|ref|YP_002142143.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|198244916|ref|YP_002215685.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|204927912|ref|ZP_03219113.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
 gi|205352838|ref|YP_002226639.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|205358968|ref|ZP_02665896.2| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL486]
 gi|213425988|ref|ZP_03358738.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E02-1180]
 gi|213622227|ref|ZP_03375010.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-2068]
 gi|213649176|ref|ZP_03379229.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. J185]
 gi|213857492|ref|ZP_03384463.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. M223]
 gi|238913150|ref|ZP_04656987.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Tennessee str. CDC07-0191]
 gi|289824898|ref|ZP_06544319.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-3139]
 gi|75483517|sp|Q57PI8|SYY_SALCH RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|81360730|sp|Q5PIK7|SYY_SALPA RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|81416369|sp|Q7CQK7|SYY_SALTY RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|81628032|sp|Q8XG70|SYY_SALTI RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|189029770|sp|A9N034|SYY_SALPB RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|254783627|sp|B5F6J8|SYY_SALA4 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|254783628|sp|B5FIF4|SYY_SALDC RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|254783630|sp|B5RAL0|SYY_SALG2 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|254783631|sp|B4THC6|SYY_SALHS RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|254783632|sp|B4T586|SYY_SALNS RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|254783634|sp|B5BKC0|SYY_SALPK RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|254783635|sp|B4TV08|SYY_SALSV RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|25292893|pir||AE0693 tyrosyl-tRNA synthetase [imported] - Salmonella enterica subsp.
           enterica serovar Typhi (strain CT18)
 gi|16419970|gb|AAL20371.1| tyrosine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|16502760|emb|CAD01918.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi]
 gi|29137404|gb|AAO68967.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|56127839|gb|AAV77345.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|62127670|gb|AAX65373.1| tyrosine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|161363497|gb|ABX67265.1| hypothetical protein SPAB_01872 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194402458|gb|ACF62680.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Newport str. SL254]
 gi|194406341|gb|ACF66560.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL476]
 gi|194455713|gb|EDX44552.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|194711014|gb|ACF90235.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. CVM19633]
 gi|195634532|gb|EDX52884.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Newport str. SL317]
 gi|197093983|emb|CAR59479.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|197212396|gb|ACH49793.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
 gi|197239883|gb|EDY22503.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA23]
 gi|197291166|gb|EDY30519.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
 gi|197939432|gb|ACH76765.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|204323254|gb|EDZ08450.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
 gi|205272619|emb|CAR37528.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|205323596|gb|EDZ11435.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA29]
 gi|205327841|gb|EDZ14605.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
 gi|205335458|gb|EDZ22222.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Kentucky str. CDC 191]
 gi|205339245|gb|EDZ26009.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL486]
 gi|205343665|gb|EDZ30429.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|267993338|gb|ACY88223.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 14028S]
 gi|301157982|emb|CBW17477.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. SL1344]
 gi|312912432|dbj|BAJ36406.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. T000240]
 gi|320086075|emb|CBY95849.1| Tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Weltevreden str. 2007-60-3289-1]
 gi|321224067|gb|EFX49130.1| Tyrosyl-tRNA synthetase ; cluster 1 [Salmonella enterica subsp.
           enterica serovar Typhimurium str. TN061786]
 gi|322615071|gb|EFY11994.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315996572]
 gi|322619126|gb|EFY16010.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-1]
 gi|322622222|gb|EFY19067.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-3]
 gi|322627744|gb|EFY24534.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-4]
 gi|322632911|gb|EFY29655.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-1]
 gi|322636598|gb|EFY33301.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-2]
 gi|322641209|gb|EFY37851.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 531954]
 gi|322644856|gb|EFY41389.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. NC_MB110209-0054]
 gi|322650308|gb|EFY46722.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. OH_2009072675]
 gi|322655880|gb|EFY52182.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. CASC_09SCPH15965]
 gi|322660208|gb|EFY56447.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 19N]
 gi|322665227|gb|EFY61415.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 81038-01]
 gi|322669484|gb|EFY65632.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MD_MDA09249507]
 gi|322673410|gb|EFY69512.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 414877]
 gi|322677338|gb|EFY73402.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 366867]
 gi|322679999|gb|EFY76038.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 413180]
 gi|323194075|gb|EFZ79274.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609458-1]
 gi|323198557|gb|EFZ83658.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556150-1]
 gi|323202884|gb|EFZ87919.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609460]
 gi|323208603|gb|EFZ93541.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 507440-20]
 gi|323210289|gb|EFZ95185.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556152]
 gi|323215857|gb|EGA00596.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB101509-0077]
 gi|323223388|gb|EGA07721.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB102109-0047]
 gi|323225149|gb|EGA09398.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB110209-0055]
 gi|323229382|gb|EGA13505.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB111609-0052]
 gi|323236881|gb|EGA20953.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009083312]
 gi|323240357|gb|EGA24401.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009085258]
 gi|323242654|gb|EGA26675.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315731156]
 gi|323252430|gb|EGA36277.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008282]
 gi|323260362|gb|EGA43979.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008284]
 gi|323267224|gb|EGA50709.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008285]
 gi|323272743|gb|EGA56148.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008287]
 gi|326623432|gb|EGE29777.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Dublin str. 3246]
 gi|332988334|gb|AEF07317.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. UK-1]
          Length = 424

 Score =  517 bits (1331), Expect = e-144,   Method: Composition-based stats.
 Identities = 160/419 (38%), Positives = 236/419 (56%), Gaps = 11/419 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 4   SNLIKQLQERGLVAQVTDEDALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +QE + KI+   + F+ +  G+  A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVAKIRKQVAPFLDFDCGENSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDF 184
            NN  W  S+  +  LR+IG  FSVN+M++ E+V+ RL R +Q +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGSMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDQGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K +   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 184 ACLNKLHGVALQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI   +   K  GK    A+ +
Sbjct: 244 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMDIEEINALEEEDKNSGKAPR-AQYV 302

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTL 355
           +A ++T +VHG E    A       F  S+ +      + +    +   E+ +G  L+  
Sbjct: 303 LAEQVTRLVHGEEGLVAAKRITECLFSGSLSALSEADFEQLAQDGVPMVEMEKGADLMQA 362

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +V A    S  +AR+ + SNA+ IN    S+ +     +D        L  GKKN+ + 
Sbjct: 363 LVDAELQPSRGQARKTIASNAVTINGEKQSDPEYIFNDEDRLFGRYTLLRRGKKNYCLI 421


>gi|238787158|ref|ZP_04630958.1| Tyrosyl-tRNA synthetase [Yersinia frederiksenii ATCC 33641]
 gi|238724946|gb|EEQ16586.1| Tyrosyl-tRNA synthetase [Yersinia frederiksenii ATCC 33641]
          Length = 428

 Score =  517 bits (1331), Expect = e-144,   Method: Composition-based stats.
 Identities = 164/424 (38%), Positives = 231/424 (54%), Gaps = 21/424 (4%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG ++ Y G+D TA SLH GHL  L+ L   Q 
Sbjct: 8   SNLIKQLQERGLVAQVTDEDALAERLAQGPISLYCGFDPTADSLHLGHLVPLLCLKRFQL 67

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+P++L+GG T +IGDPSF+   R++     + E +EKI+   S F+ +  G+  A+ 
Sbjct: 68  AGHRPVALVGGATGMIGDPSFKANERKLNTEDTVNEWVEKIRRQVSPFLDFDCGENSAIA 127

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYDF 184
            NN  W   +  +  LR+IG  FSVN+M++ E+V+ RL R+   +SF EF+Y +LQAYDF
Sbjct: 128 ANNYDWFGGMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDSGISFTEFSYNLLQAYDF 187

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K Y   LQ+GGSDQWGNI  GIDL  RL   +++ LT PL+T A GTK GKT  GA
Sbjct: 188 ACLNKAYGVALQIGGSDQWGNITSGIDLTRRLHQQQVYGLTVPLITKADGTKFGKTEGGA 247

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + M EI   +   K  GK    A+ +
Sbjct: 248 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSMEEINALEEEDKNSGKAPR-AQYV 306

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS-----------QHMPTISISKDEVSRGM 350
           +A  +T MVHG E    A       F  ++H              MPTI +S+D      
Sbjct: 307 LAENVTGMVHGAEGLAAAKRITDSLFSGNLHDMTEADFAQLAQDGMPTIELSRD-----A 361

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            L   +V A    S  +AR  + SNA+ IN    S+ +      D        L  GKK+
Sbjct: 362 DLQQALVNAELVPSRGQARTMINSNAVAINGEKQSDPEYTFTDADRLFGRYTLLRRGKKH 421

Query: 411 HIIC 414
           + + 
Sbjct: 422 YCLI 425


>gi|261246653|emb|CBG24463.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. D23580]
          Length = 424

 Score =  517 bits (1331), Expect = e-144,   Method: Composition-based stats.
 Identities = 160/419 (38%), Positives = 236/419 (56%), Gaps = 11/419 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 4   SNLIKQLQERGLVAQVTDEDALAERLAQGPIVLYCGFDPTADSLHLGHLVPLLCLKRFQQ 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +QE + KI+   + F+ +  G+  A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVAKIRKQVAPFLDFDCGENSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDF 184
            NN  W  S+  +  LR+IG  FSVN+M++ E+V+ RL R +Q +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGSMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDQGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K +   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 184 ACLNKLHGVALQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI   +   K  GK    A+ +
Sbjct: 244 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMDIEEINALEEEDKNSGKAPR-AQYV 302

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTL 355
           +A ++T +VHG E    A       F  S+ +      + +    +   E+ +G  L+  
Sbjct: 303 LAEQVTRLVHGEEGLVAAKRITECLFSGSLSALSEADFEQLAQDGVPMVEMEKGADLMQA 362

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +V A    S  +AR+ + SNA+ IN    S+ +     +D        L  GKKN+ + 
Sbjct: 363 LVDAELQPSRGQARKTIASNAVTINGEKQSDPEYIFNDEDRLFGRYTLLRRGKKNYCLI 421


>gi|296332055|ref|ZP_06874519.1| tyrosyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305675550|ref|YP_003867222.1| tyrosyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str.
           W23]
 gi|296150826|gb|EFG91711.1| tyrosyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305413794|gb|ADM38913.1| tyrosyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str.
           W23]
          Length = 422

 Score =  517 bits (1331), Expect = e-144,   Method: Composition-based stats.
 Identities = 154/420 (36%), Positives = 238/420 (56%), Gaps = 13/420 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           ++ L  LS RG I Q+++   L+   ++  +  Y G+D TA SLH GHL  ++ L   Q 
Sbjct: 2   TNLLEDLSFRGLIQQMTDEEGLNKQLNEEKIRLYSGFDPTADSLHIGHLLPILTLRRFQL 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH PI+L+GG T +IGDPS +   R +  +  + E  +KIK   S F+ +   +  A++
Sbjct: 62  AGHHPIALVGGATGLIGDPSGKKAERTLNTADIVSEWSQKIKNQLSRFLDFDATENPAVI 121

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
            NN  W+  +  ID LR++G  F +N ML+ ++V SR++    +S+ EF+YMILQ+YDF+
Sbjct: 122 ANNFDWIGKMNVIDFLRDVGKNFGINYMLAKDTVSSRIES--GISYTEFSYMILQSYDFL 179

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGER--LKTPKLFALTSPLLTTASGTKMGKTLSG 243
            L ++ +C+LQ+GGSDQWGNI  G++L  +   +  K F LT PL+T A GTK GKT  G
Sbjct: 180 NLYRDKNCKLQIGGSDQWGNITAGLELIRKSEEEGAKAFGLTIPLVTKADGTKFGKTEGG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKI 301
           AIWL+KE TSPY F+Q+W N DD DVV + K  T L   EI+  A+      E  EA+K 
Sbjct: 240 AIWLDKEKTSPYEFYQFWINTDDRDVVKYLKYFTFLSKEEIEAYAEKTETAPEKREAQKR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV-------SRGMGLLT 354
           +A E+T +VHGRE  E+A   +   F  +I       + +   +V       S+ + L+ 
Sbjct: 300 LAEEVTALVHGREALEQAINISQALFSGNIKELSAEDVKVGFKDVPSMEADSSQELSLVD 359

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           ++V++  + S  +AR  +++ A+ IN    +     +  +D        L  GKK + + 
Sbjct: 360 VLVQSKLSPSKRQAREDIQNGAVYINGERQTEINYILSGEDRIEGQFTVLRRGKKKYFLV 419


>gi|321312505|ref|YP_004204792.1| tyrosyl-tRNA synthetase [Bacillus subtilis BSn5]
 gi|291485399|dbj|BAI86474.1| tyrosyl-tRNA synthetase [Bacillus subtilis subsp. natto BEST195]
 gi|320018779|gb|ADV93765.1| tyrosyl-tRNA synthetase [Bacillus subtilis BSn5]
          Length = 422

 Score =  516 bits (1330), Expect = e-144,   Method: Composition-based stats.
 Identities = 153/423 (36%), Positives = 240/423 (56%), Gaps = 19/423 (4%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           ++ L  LS RG I Q+++   L+   ++  +  Y G+D TA SLH GHL  ++ L   Q 
Sbjct: 2   TNLLEDLSFRGLIQQMTDEEGLNKQLNEEKIRLYSGFDPTADSLHIGHLLPILTLRRFQL 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH PI+L+GG T +IGDPS +   R +  +  + E  +KIK   S F+ +   +  A++
Sbjct: 62  AGHHPIALVGGATGLIGDPSGKKAERTLNTADIVSEWSQKIKNQLSRFLDFEAAENPAVI 121

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
            NN  W+  +  ID LR++G  F +N ML+ ++V SR++    +S+ EF+YMILQ+YDF+
Sbjct: 122 ANNFDWIGKMNVIDFLRDVGKNFGINYMLAKDTVSSRIES--GISYTEFSYMILQSYDFL 179

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGE--RLKTPKLFALTSPLLTTASGTKMGKTLSG 243
            L ++ +C+LQ+GGSDQWGNI  G++L      +  K F LT PL+T A GTK GKT  G
Sbjct: 180 NLYRDKNCKLQIGGSDQWGNITAGLELIRKSEEEGAKAFGLTIPLVTKADGTKFGKTEGG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKI 301
           AIWL+KE TSPY F+Q+W N DD DVV + K  T L   EI+  A+      E  EA+K 
Sbjct: 240 AIWLDKEKTSPYEFYQFWINTDDRDVVKYLKYFTFLSKEEIEAYAEKTETAPEKREAQKR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMG 351
           +A E+T++VHGRE  E+A   +   F  +I            + +P++ +     ++ + 
Sbjct: 300 LAEEVTSLVHGREALEQAINISQALFSGNIKELSAQDVKVGFKDVPSMEVDS---TQELS 356

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           L+ ++V++  + S  +AR  +++ A+ IN    +     +  +D        L  GKK +
Sbjct: 357 LVDVLVQSKLSPSKRQAREDIQNGAVYINGERQTEINYTLSAEDRIENQFTVLRRGKKKY 416

Query: 412 IIC 414
            + 
Sbjct: 417 FLV 419


>gi|290509251|ref|ZP_06548622.1| tyrosyl-tRNA synthetase [Klebsiella sp. 1_1_55]
 gi|289778645|gb|EFD86642.1| tyrosyl-tRNA synthetase [Klebsiella sp. 1_1_55]
          Length = 428

 Score =  516 bits (1330), Expect = e-144,   Method: Composition-based stats.
 Identities = 160/419 (38%), Positives = 236/419 (56%), Gaps = 11/419 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 8   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 67

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++     +QE ++KI+   + F+ +  G   A+ 
Sbjct: 68  AGHKPVALVGGATGLIGDPSFKAAERKLNTEDTVQEWVDKIRKQVAPFLDFDCGDNSAIA 127

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDF 184
            NN  W  S+  +  LR+IG  FSVN+M++ E+V+ RL R +Q +SF EF+Y +LQ YDF
Sbjct: 128 ANNYDWFGSMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDQGISFTEFSYNLLQGYDF 187

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K +   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 188 ACLNKLHGVALQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 247

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + M+EI   +   K  GK    A+ +
Sbjct: 248 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMDMAEINALEEEDKNSGKAPR-AQYV 306

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTL 355
           +A ++T +VHG E  E A       F+ ++        + +    +   E+ +G  LL  
Sbjct: 307 LAEQVTRLVHGEEGLEAAKRITESLFNGNLSDLSEADFEQLAQDGVPMIEMEKGADLLQA 366

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +V +    S  +AR+ + SNA+ IN    ++ +      D        L  GKKN+ + 
Sbjct: 367 LVDSELQPSRGQARKTVASNAVTINGEKQADPEYVFSDSDRLFGRYTLLRRGKKNYCLV 425


>gi|254502600|ref|ZP_05114751.1| tyrosyl-tRNA synthetase [Labrenzia alexandrii DFL-11]
 gi|222438671|gb|EEE45350.1| tyrosyl-tRNA synthetase [Labrenzia alexandrii DFL-11]
          Length = 417

 Score =  516 bits (1330), Expect = e-144,   Method: Composition-based stats.
 Identities = 215/415 (51%), Positives = 298/415 (71%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  FKS+FL +LSERGF+HQIS+P+ LD LC++  VTAYIG+D TA SLHAG L  +M+L
Sbjct: 1   MSEFKSEFLKVLSERGFVHQISDPQGLDELCAKETVTAYIGFDCTAPSLHAGSLVTIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
           +W Q+TGH+PI+LMG GT+ +GDP+ +DESR+++  + I+EN   I+ +F   + +G G 
Sbjct: 61  YWFQQTGHRPIALMGSGTTRVGDPTGKDESRKVLSDETIEENKAGIRKVFEKLLSFGDGP 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           TDALM++N  WL  + Y++ LR+IG  FSVN+M+  +SV+ RL+REQ LSFLEFNYM+LQ
Sbjct: 121 TDALMMDNADWLLKLNYMEFLRDIGRHFSVNQMIQRDSVKLRLEREQHLSFLEFNYMLLQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
            YDF+E+ +   CRLQMGGSDQW NI+ G+DL  R ++ + FALT+PLLTT+SG KMGKT
Sbjct: 181 GYDFLEIYQQTGCRLQMGGSDQWSNILSGVDLIRRKESKEAFALTAPLLTTSSGAKMGKT 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
            +GA+WLN+E  S Y++WQYWRN +DADV  F K  T LP++EI R+A L G  INEAKK
Sbjct: 241 AAGAVWLNEEQLSAYDYWQYWRNTEDADVEKFLKLFTILPLNEISRLAALDGAGINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           ++ATE T M+HGRE+AE AA  A + F+    ++ +PT+ ++  ++  G+G+L   V AG
Sbjct: 301 VLATEATAMIHGREKAEAAAETARKAFEEGQSAEGLPTVEVASADLEAGLGVLNAFVTAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
              S  + RR++K  A+KIN+    +   Q+ L D    G IKLS GKK H++  
Sbjct: 361 LCASNGDVRRNIKGGAVKINDKGEQDANRQLTLADVTEDGIIKLSLGKKKHVLLK 415


>gi|260597789|ref|YP_003210360.1| tyrosyl-tRNA synthetase [Cronobacter turicensis z3032]
 gi|260216966|emb|CBA30602.1| Tyrosyl-tRNA synthetase [Cronobacter turicensis z3032]
          Length = 424

 Score =  516 bits (1330), Expect = e-144,   Method: Composition-based stats.
 Identities = 155/419 (36%), Positives = 235/419 (56%), Gaps = 11/419 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q 
Sbjct: 4   SNLIKQLQERGLVAQVTDEEALAQRLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQM 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++     +QE ++KI+   + F+ +  G+  A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKATERKLNTEDTVQEWVDKIRRQVAPFLDFDCGENSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYDF 184
            NN  W  S+  +  LR+IG  FSVN+M++ E+V+ RL R+   +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGSMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDVGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L + +   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  GA
Sbjct: 184 ACLNELHGVALQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKSDGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI   +   K  GK    A+ +
Sbjct: 244 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSLDEINALEEEDKNSGKAPR-AQYV 302

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTL 355
           +A ++T +VHG E    A       F+ ++++      + +    +   E+ +G  L+  
Sbjct: 303 LAEQVTRLVHGEEGLAAAKRITESLFNGNLNALSEADFEQLAQDGVPMIEMEKGADLMQA 362

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +V +    S  +AR+ + SNAI IN    ++ +      D        L  GKKN+ + 
Sbjct: 363 LVDSELQPSRGQARKTIASNAITINGEKQADPEYTFSDSDRLFGRYTLLRRGKKNYCLV 421


>gi|156934169|ref|YP_001438085.1| tyrosyl-tRNA synthetase [Cronobacter sakazakii ATCC BAA-894]
 gi|189083654|sp|A7MMK1|SYY_ENTS8 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|156532423|gb|ABU77249.1| hypothetical protein ESA_01996 [Cronobacter sakazakii ATCC BAA-894]
          Length = 428

 Score =  516 bits (1330), Expect = e-144,   Method: Composition-based stats.
 Identities = 156/419 (37%), Positives = 235/419 (56%), Gaps = 11/419 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q 
Sbjct: 8   SNLIKQLQERGLVAQVTDEEALAQRLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQM 67

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++     +QE ++KI+   + F+ +  G+  A+ 
Sbjct: 68  AGHKPVALVGGATGLIGDPSFKATERKLNTEDTVQEWVDKIRRQVAPFLDFDCGENSAIA 127

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYDF 184
            NN  W  ++  +  LR+IG  FSVN+M++ E+V+ RL R+   +SF EF+Y +LQ YDF
Sbjct: 128 ANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDVGISFTEFSYNLLQGYDF 187

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K +   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  GA
Sbjct: 188 ACLNKLHGVALQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKSDGTKFGKTEGGA 247

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI   +   K  GK    A+ +
Sbjct: 248 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIDEINALEEEDKNSGKAPR-AQYV 306

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTL 355
           +A ++T +VHG E    A       F+ ++++      + +    +   E+ +G  L+  
Sbjct: 307 LAEQVTRLVHGEEGLAAAKRITESLFNGNLNALSEADFEQLAQNGVPMIEMEKGADLMQA 366

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +V +    S  +AR+ + SNAI IN    S+ +      D        L  GKKN+ + 
Sbjct: 367 LVDSELQPSRGQARKTIASNAITINGEKQSDPEYTFSDSDRLFGRYTLLRRGKKNYCLV 425


>gi|283785148|ref|YP_003365013.1| tyrosyl-tRNA synthetase [Citrobacter rodentium ICC168]
 gi|282948602|emb|CBG88193.1| tyrosyl-tRNA synthetase [Citrobacter rodentium ICC168]
          Length = 424

 Score =  516 bits (1330), Expect = e-144,   Method: Composition-based stats.
 Identities = 160/419 (38%), Positives = 238/419 (56%), Gaps = 11/419 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG I Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 4   SNLIKQLQERGLIAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +QE ++KI+   + F+ +  G+  A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDCGENSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDF 184
            NN  W  S+  +  LR+IG  FSVN+M++ E+V+ RL R +Q +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGSMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDQGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K +   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 184 ACLNKLHGVALQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + ++EI   +   K  GK    A+ +
Sbjct: 244 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMDIAEINALEEEDKNSGKAPR-AQYV 302

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTL 355
           +A ++T +VHG E    A       F+ ++ +      + +    +   E+ +G  L+  
Sbjct: 303 LAEQVTRLVHGEEGLAAAKRITESLFNGTLSALSEADFEQLAQDGVPMVEMEKGADLMQA 362

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +V +    S  +AR+ + SNAI IN    S+ +      D        L  GKKN+ + 
Sbjct: 363 LVDSELQPSRGQARKTIASNAITINGEKQSDPEYIFVDDDRLYGRYTLLRRGKKNYCLV 421


>gi|323137721|ref|ZP_08072797.1| tyrosyl-tRNA synthetase [Methylocystis sp. ATCC 49242]
 gi|322397018|gb|EFX99543.1| tyrosyl-tRNA synthetase [Methylocystis sp. ATCC 49242]
          Length = 421

 Score =  516 bits (1330), Expect = e-144,   Method: Composition-based stats.
 Identities = 216/413 (52%), Positives = 298/413 (72%)

Query: 3   AFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
           + +SDFL +L ERGF+HQ S+   LD     G + AYIG+D TA SLH G L  +M+L W
Sbjct: 6   SPRSDFLRVLMERGFVHQCSDFAGLDEKALAGGLPAYIGFDCTAPSLHVGSLLPIMMLAW 65

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD 122
           LQ+TG KP+ LMGGGT+ +GDPS +DESR+++  ++I  N   I+ +F  F+ +G G TD
Sbjct: 66  LQRTGGKPLPLMGGGTTRVGDPSGKDESRKLLTIEQIDANKASIRRVFERFLTFGDGATD 125

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
           ALML+N  WL  + YI+ LR++G  FSVNRML+ +SV+ RL+RE  LSF+EFNYM LQAY
Sbjct: 126 ALMLDNAEWLAPLNYIEFLRDVGRHFSVNRMLTMDSVKLRLEREHELSFIEFNYMCLQAY 185

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DFVE+ + +   LQMGGSDQWGNI+ G+DLG R+ TP+L+ALTSPLLTT+SG KMGKT +
Sbjct: 186 DFVEINRRHGALLQMGGSDQWGNIVTGLDLGRRMGTPQLYALTSPLLTTSSGAKMGKTAA 245

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKII 302
           GA+WLN +M SPY++WQYWRN +DADV  F K  T LPM E+ R+A L+G EINEAKK +
Sbjct: 246 GAVWLNADMLSPYDYWQYWRNTEDADVARFLKLFTFLPMEEVARLAALEGAEINEAKKTL 305

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFA 362
           ATE T ++HGRE AE+AA  A   F+    +  +P + +S +E++ G+G+L+  VKAG  
Sbjct: 306 ATEATALIHGREAAEQAAETARATFEEGALALSLPKVCVSAEEIAAGLGVLSAFVKAGLV 365

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            ST EARR +K   +++N+ ++++E+  +  +DF++ G  KLS GKK H++  
Sbjct: 366 ASTGEARRQIKGGGLRVNDVVVTDERGTLNEKDFETDGVAKLSLGKKKHVLLE 418


>gi|213051637|ref|ZP_03344515.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E00-7866]
 gi|213586445|ref|ZP_03368271.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-0664]
 gi|224584042|ref|YP_002637840.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|254783633|sp|C0Q5T3|SYY_SALPC RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|224468569|gb|ACN46399.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|322687471|gb|EFY83443.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 446600]
 gi|322714506|gb|EFZ06077.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. A50]
 gi|323129719|gb|ADX17149.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 4/74]
 gi|326627909|gb|EGE34252.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 9]
          Length = 428

 Score =  516 bits (1330), Expect = e-144,   Method: Composition-based stats.
 Identities = 160/419 (38%), Positives = 236/419 (56%), Gaps = 11/419 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 8   SNLIKQLQERGLVAQVTDEDALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 67

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +QE + KI+   + F+ +  G+  A+ 
Sbjct: 68  AGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVAKIRKQVAPFLDFDCGENSAIA 127

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDF 184
            NN  W  S+  +  LR+IG  FSVN+M++ E+V+ RL R +Q +SF EF+Y +LQ YDF
Sbjct: 128 ANNYDWFGSMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDQGISFTEFSYNLLQGYDF 187

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K +   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 188 ACLNKLHGVALQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 247

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI   +   K  GK    A+ +
Sbjct: 248 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMDIEEINALEEEDKNSGKAPR-AQYV 306

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTL 355
           +A ++T +VHG E    A       F  S+ +      + +    +   E+ +G  L+  
Sbjct: 307 LAEQVTRLVHGEEGLVAAKRITECLFSGSLSALSEADFEQLAQDGVPMVEMEKGADLMQA 366

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +V A    S  +AR+ + SNA+ IN    S+ +     +D        L  GKKN+ + 
Sbjct: 367 LVDAELQPSRGQARKTIASNAVTINGEKQSDPEYIFNDEDRLFGRYTLLRRGKKNYCLI 425


>gi|254454555|ref|ZP_05067992.1| tyrosyl-tRNA synthetase [Octadecabacter antarcticus 238]
 gi|198268961|gb|EDY93231.1| tyrosyl-tRNA synthetase [Octadecabacter antarcticus 238]
          Length = 427

 Score =  516 bits (1329), Expect = e-144,   Method: Composition-based stats.
 Identities = 221/413 (53%), Positives = 291/413 (70%), Gaps = 3/413 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KSDF+ ++ ERGF+   ++ + LD   + GVV AYIG+D TA SLH G L Q+M+L WLQ
Sbjct: 16  KSDFIRVMIERGFLADCTDYQGLDEAFAAGVVPAYIGFDATAKSLHVGSLIQIMMLRWLQ 75

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK-TDA 123
           KTGH+PI+LMGGGT+ +GDPSFR + R ++ + +I +NI  IK +F+++I Y TG    A
Sbjct: 76  KTGHQPITLMGGGTTKVGDPSFRADERPLLTADQIDDNISGIKKVFAAYIDYDTGAANSA 135

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           LMLNN  WL  + Y+D LR+IG  FSVNRMLSFESV+SRL REQSLSFLEFNYMILQAYD
Sbjct: 136 LMLNNAKWLDGLNYLDFLRDIGKHFSVNRMLSFESVKSRLDREQSLSFLEFNYMILQAYD 195

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+EL + Y C+LQMGGSDQWGNI+ GIDL  R+   ++F LTSPLLTT+ G KMGK+LSG
Sbjct: 196 FLELNRRYGCKLQMGGSDQWGNIVNGIDLTRRVLDHQIFGLTSPLLTTSDGKKMGKSLSG 255

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIA 303
           AIWLN E+ S Y FWQ+WRN  DADV  F K  T LP+ E DR+  L+G EINEAK I+A
Sbjct: 256 AIWLNDEILSSYEFWQFWRNTTDADVGRFLKLYTELPVEECDRLGALEGVEINEAKIILA 315

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
            E+T ++HG + A+ A   A E F+       +PT++++  +V+ G+ ++ LIVK+G A 
Sbjct: 316 NEVTALLHGTDAAQAAEKTAKEVFEKGGVGDDLPTLTLATSDVASGISIVQLIVKSGLAG 375

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           S  EA+R +     K+N+ I+++  L I   D  +   IKLS GKK H +  L
Sbjct: 376 SGKEAKRLISEGGAKMNDDILTDAGLMIDAADLATP--IKLSAGKKRHALVQL 426


>gi|269126394|ref|YP_003299764.1| tyrosyl-tRNA synthetase [Thermomonospora curvata DSM 43183]
 gi|268311352|gb|ACY97726.1| tyrosyl-tRNA synthetase [Thermomonospora curvata DSM 43183]
          Length = 425

 Score =  516 bits (1329), Expect = e-144,   Method: Composition-based stats.
 Identities = 154/426 (36%), Positives = 234/426 (54%), Gaps = 19/426 (4%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +D L  L+ R  I Q ++  EL  L + G VT Y G+D TA SLH G+L Q++ L   Q 
Sbjct: 2   TDVLEDLAWRDLIAQSTDLDELRALLAAGPVTLYCGFDPTAPSLHLGNLIQILTLRRFQL 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+PI L+GG T +IGDPS +   R +   + +   +E+I+   + F+ +  G   ALM
Sbjct: 62  AGHRPIGLVGGATGLIGDPSGKSAERTLNSEEVVAAWVERIRAQVAKFLDF-EGPNAALM 120

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           ++N  W   +  I+ LR+IG  F VNRML+ E+V++RL+    +S+ EF+Y++LQA DF+
Sbjct: 121 VSNLEWTGPMTAIEFLRDIGKHFPVNRMLARETVKTRLET-TGMSYTEFSYVLLQAMDFL 179

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG-A 244
           EL + Y CRLQ GGSDQWGN+  G+DL  R++     ALT+PLLT A GTK GKT  G  
Sbjct: 180 ELYRRYGCRLQTGGSDQWGNLTAGVDLIRRVEGGTAHALTTPLLTKADGTKFGKTAGGET 239

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKII 302
            WL+ E+TSPY F+Q+W N DD DV  + K  +  P  EI +      +      A++ +
Sbjct: 240 YWLDPELTSPYAFYQFWINADDRDVEKYLKVFSFRPREEIQQLVKESAERPAARIAQRAL 299

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQ-----------HMPTISISKDEVSRGMG 351
           A E+TT+VHG +E  K   A+   F      +            +P + I   ++     
Sbjct: 300 AEEVTTLVHGADECAKVVAASRALFGQGALEELDERTLGAALAEVPRMEIPPGDLP---P 356

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           ++ L+  +G   S +EARR +      +NN+ +++E+     +D      + L  GK+N 
Sbjct: 357 VVDLLAGSGLCKSKSEARRTIAQGGAYLNNTKVTSEEAVPTTEDLLHGRFLVLRRGKRNV 416

Query: 412 IICHLC 417
               + 
Sbjct: 417 GGVEVV 422


>gi|261821918|ref|YP_003260024.1| tyrosyl-tRNA synthetase [Pectobacterium wasabiae WPP163]
 gi|261605931|gb|ACX88417.1| tyrosyl-tRNA synthetase [Pectobacterium wasabiae WPP163]
          Length = 425

 Score =  516 bits (1329), Expect = e-144,   Method: Composition-based stats.
 Identities = 158/418 (37%), Positives = 227/418 (54%), Gaps = 9/418 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG I Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q 
Sbjct: 4   SNLIKQLQERGLIAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQL 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+P++L+GG T +IGDPSF+   R++  +  + E +EKI+   S F+ +  GK  A+ 
Sbjct: 64  AGHQPVALVGGATGLIGDPSFKATERKLNTADTVGEWVEKIRRQVSPFLDFDCGKNSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYDF 184
            NN  W  S+  +D LR+IG  FSVN+M+S E+V+ RL R+   +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGSMNVLDFLRDIGKHFSVNQMISKEAVKQRLNRDDVGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K +D  LQ+GGSDQWGNI  GIDL  R+   +++ LT PL+T + GTK GKT  GA
Sbjct: 184 ASLNKQHDVELQIGGSDQWGNITSGIDLTRRMNQKQVYGLTVPLITKSDGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKII 302
           IWL+   TSPY F+Q+W N  DADV  F K  T + + +ID + +          A+ ++
Sbjct: 244 IWLDASKTSPYKFYQFWINTADADVYRFLKFFTFMSLEDIDALEEEDKNSGTAPRAQYVL 303

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTLI 356
           A E+T MVHG    E A       F  ++          +    +   E+     L   +
Sbjct: 304 AEEVTRMVHGESGLEAARRITQSLFSGALQDMTQDDFAQLAQDGMPIIELENSADLQQAL 363

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           V A    S  +AR  + SNA+ IN    +N +      D        L  GKK++ + 
Sbjct: 364 VSAELVPSRGQARTMIASNAVTINGEKQANPEYTFSAADRLFDRYTLLRRGKKHYCLI 421


>gi|291526421|emb|CBK92008.1| tyrosyl-tRNA synthetase [Eubacterium rectale DSM 17629]
          Length = 408

 Score =  516 bits (1329), Expect = e-144,   Method: Composition-based stats.
 Identities = 172/408 (42%), Positives = 257/408 (62%), Gaps = 6/408 (1%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG I Q+++ +E+  L + G  T YIG+D TA SLH GH   L L+  LQ  G
Sbjct: 3   IYDELVARGLIAQVTDEKEIKELINNGKATFYIGFDPTADSLHVGHFMALCLMKRLQMAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           +KPI L+GGGT+ IGDPS R + R+MM ++ I  N+E  K   S FI +G GK  A+M+N
Sbjct: 63  NKPIVLIGGGTAQIGDPSGRTDMRQMMTTETINHNVECFKKQMSRFIDFGEGK--AIMVN 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  + Y+D+LRE+G+ FSVNRML+ E  + R+  E+ LSFLEFNYMI+Q+YDF  L
Sbjct: 121 NADWLMDLNYVDVLREVGAHFSVNRMLTAECYKQRM--EKGLSFLEFNYMIMQSYDFYTL 178

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            + Y C ++ GG DQW N++ G +L  R      +A+T  LL  + G KMGKT SGA+WL
Sbjct: 179 FQKYGCNMEFGGDDQWSNMLGGTELIRRKLGKDAYAMTINLLLNSEGKKMGKTQSGAVWL 238

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           +   T+P+ F+QYWRN+ DADV+   + LT LP+ EID+M   +G ++NEAK+I+A E+T
Sbjct: 239 DPNKTTPFEFFQYWRNVSDADVLKCIRMLTFLPLEEIDKMESWEGAQLNEAKEILAFELT 298

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTN 366
            +VHG EEA KA  A+   F    ++ +MPT++++ ++   G + +++++VKAG   S  
Sbjct: 299 KLVHGEEEATKAKEASHALFAGGANNANMPTVTVTAEDFPDGELDIISVLVKAGLCDSRG 358

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           + RR+++   + + +  +++   +  L DF   G + +  GKK     
Sbjct: 359 DGRRNIQQGGVSVADEKVTDISTKYTLDDFKGEG-LIIRRGKKKFAKV 405


>gi|152970527|ref|YP_001335636.1| tyrosyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
           MGH 78578]
 gi|262044618|ref|ZP_06017673.1| tyrosine-tRNA ligase [Klebsiella pneumoniae subsp. rhinoscleromatis
           ATCC 13884]
 gi|330015707|ref|ZP_08308230.1| tyrosine--tRNA ligase [Klebsiella sp. MS 92-3]
 gi|189083656|sp|A6T9Y5|SYY_KLEP7 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|150955376|gb|ABR77406.1| tyrosyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
           MGH 78578]
 gi|259038019|gb|EEW39235.1| tyrosine-tRNA ligase [Klebsiella pneumoniae subsp. rhinoscleromatis
           ATCC 13884]
 gi|328531176|gb|EGF58025.1| tyrosine--tRNA ligase [Klebsiella sp. MS 92-3]
          Length = 428

 Score =  516 bits (1329), Expect = e-144,   Method: Composition-based stats.
 Identities = 159/419 (37%), Positives = 236/419 (56%), Gaps = 11/419 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 8   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 67

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++     +QE ++KI+   + F+ +  G   A+ 
Sbjct: 68  AGHKPVALVGGATGLIGDPSFKAAERKLNTEDTVQEWVDKIRKQVAPFLDFDCGDNSAIA 127

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDF 184
            NN  W  S+  +  LR+IG  FSVN+M++ E+V+ RL R +Q +SF EF+Y +LQ YDF
Sbjct: 128 ANNYDWFGSMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDQGISFTEFSYNLLQGYDF 187

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K +   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 188 ACLNKLHGVALQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 247

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + ++EI   +   K  GK    A+ +
Sbjct: 248 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMDIAEINALEEEDKNSGKAPR-AQYV 306

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTL 355
           +A ++T +VHG E  E A       F+ ++        + +    +   E+ +G  LL  
Sbjct: 307 LAEQVTRLVHGEEGLEAAKRITESLFNGNLSDLSEADFEQLAQDGVPMIEMEKGADLLQA 366

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +V +    S  +AR+ + SNA+ IN    ++ +      D        L  GKKN+ + 
Sbjct: 367 LVDSELQPSRGQARKTVASNAVTINGEKQADPEYVFSDSDRLFGRYTLLRRGKKNYCLV 425


>gi|16080019|ref|NP_390845.1| tyrosyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           168]
 gi|221310911|ref|ZP_03592758.1| tyrosyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           168]
 gi|221315237|ref|ZP_03597042.1| tyrosyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           NCIB 3610]
 gi|221320155|ref|ZP_03601449.1| tyrosyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           JH642]
 gi|221324436|ref|ZP_03605730.1| tyrosyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           SMY]
 gi|135192|sp|P22326|SYY1_BACSU RecName: Full=Tyrosyl-tRNA synthetase 1; AltName:
           Full=Tyrosine--tRNA ligase 1; Short=TyrRS 1
 gi|143795|gb|AAA22878.1| transfer RNA-Tyr synthetase [Bacillus subtilis]
 gi|2293225|gb|AAC00303.1| tyrosine tRNA synthetase [Bacillus subtilis]
 gi|2635451|emb|CAB14945.1| tyrosyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           168]
          Length = 422

 Score =  515 bits (1328), Expect = e-144,   Method: Composition-based stats.
 Identities = 153/423 (36%), Positives = 240/423 (56%), Gaps = 19/423 (4%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           ++ L  LS RG I Q+++   L+   ++  +  Y G+D TA SLH GHL  ++ L   Q 
Sbjct: 2   TNLLEDLSFRGLIQQMTDEEGLNKQLNEEKIRLYSGFDPTADSLHIGHLLPILTLRRFQL 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH PI+L+GG T +IGDPS +   R +  +  + E  +KIK   S F+ +   +  A++
Sbjct: 62  AGHHPIALVGGATGLIGDPSGKKAERTLNTADIVSEWSQKIKNQLSRFLDFEAAENPAVI 121

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
            NN  W+  +  ID LR++G  F +N ML+ ++V SR++    +S+ EF+YMILQ+YDF+
Sbjct: 122 ANNFDWIGKMNVIDFLRDVGKNFGINYMLAKDTVSSRIES--GISYTEFSYMILQSYDFL 179

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGE--RLKTPKLFALTSPLLTTASGTKMGKTLSG 243
            L ++ +C+LQ+GGSDQWGNI  G++L      +  K F LT PL+T A GTK GKT  G
Sbjct: 180 NLYRDKNCKLQIGGSDQWGNITAGLELIRKSEEEGAKAFGLTIPLVTKADGTKFGKTEGG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKI 301
           AIWL+KE TSPY F+Q+W N DD DVV + K  T L   EI+  A+      E  EA+K 
Sbjct: 240 AIWLDKEKTSPYEFYQFWINTDDRDVVKYLKYFTFLSKEEIEAYAEKTETAPEKREAQKR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMG 351
           +A E+T++VHGRE  E+A   +   F  +I            + +P++ +     ++ + 
Sbjct: 300 LAEEVTSLVHGREALEQAINISQALFSGNIKELSAQDVKVGFKDVPSMEVDS---TQELS 356

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           L+ ++V++  + S  +AR  +++ A+ IN    +     +  +D        L  GKK +
Sbjct: 357 LVDVLVQSKLSPSKRQAREDIQNGAVYINGERQTEINYTLSGEDRIENQFTVLRRGKKKY 416

Query: 412 IIC 414
            + 
Sbjct: 417 FLV 419


>gi|304570804|ref|YP_002517319.2| tyrosyl-tRNA synthetase [Caulobacter crescentus NA1000]
          Length = 441

 Score =  515 bits (1328), Expect = e-144,   Method: Composition-based stats.
 Identities = 204/414 (49%), Positives = 275/414 (66%), Gaps = 1/414 (0%)

Query: 2   PAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
            +FKS+FL  L  RG+IHQI++  ELD     G + AYIG+D TA SLH G L Q+MLL 
Sbjct: 27  SSFKSEFLRTLEARGYIHQITHADELDTAAQGGPIVAYIGFDATAPSLHVGSLIQIMLLR 86

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKT 121
            LQ+ GHKPI LMGGGT+ +GDP+ +DESR+++   +IQ NI  IK +FS F+ +G G T
Sbjct: 87  RLQQAGHKPIVLMGGGTTKVGDPTGKDESRKLLSDADIQANIAGIKTVFSKFLTFGDGPT 146

Query: 122 DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA 181
           DA+M++N+ WL    Y+  LRE G  F+VNRML+F+SV+ RL+REQ ++FLEFNYM++QA
Sbjct: 147 DAIMVDNDVWLSKFGYVQFLREYGVHFTVNRMLAFDSVKLRLEREQPMTFLEFNYMLMQA 206

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            DF+EL + + C LQMGGSDQWGNI+ G++L  R+     F LT+PLL TASG KMGKT 
Sbjct: 207 VDFLELNRAHGCVLQMGGSDQWGNILNGVELTRRVDQKSAFGLTTPLLATASGAKMGKTA 266

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKI 301
           +GA+WLN E  SPY++WQ+WRN +DADV  F K  T LP+  I  +  L+G +INEAKK+
Sbjct: 267 AGAVWLNAEQLSPYDYWQFWRNTEDADVGRFLKLFTDLPLDRIAELEALEGAQINEAKKV 326

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGF 361
           +A E T M HG EEA KA  AA + F+    S  +PT  I+  ++  G+ L  L   AG 
Sbjct: 327 LADEATRMAHGEEEARKARDAAEKAFEQGALSADLPTYEIAAADLDAGVVLAALFADAGL 386

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           A S  EARR  +   +K+N+   ++    I   D    G +KL+ GKK  ++  
Sbjct: 387 AGSRGEARRLAQGGGLKVNDKAEADANRLITAADLV-EGVVKLAAGKKKIVLVK 439


>gi|291526914|emb|CBK92500.1| tyrosyl-tRNA synthetase [Eubacterium rectale M104/1]
          Length = 408

 Score =  515 bits (1328), Expect = e-144,   Method: Composition-based stats.
 Identities = 173/408 (42%), Positives = 257/408 (62%), Gaps = 6/408 (1%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG I Q+++ +E+  L + G  T YIG+D TA SLH GH   L L+  LQ  G
Sbjct: 3   IYDELVARGLIAQVTDEKEIKELINNGKATFYIGFDPTADSLHVGHFMALCLMKRLQMAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           +KPI L+GGGT+ IGDPS R + R+MM ++ I  N+E  K   S FI +G GK  A+M+N
Sbjct: 63  NKPIVLIGGGTAQIGDPSGRTDMRQMMTTETINHNVECFKKQMSRFIDFGEGK--AIMVN 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  + Y+D+LRE+G+ FSVNRML+ E  + R+  E+ LSFLEFNYMI+Q+YDF  L
Sbjct: 121 NADWLMDLNYVDVLREVGAHFSVNRMLTAECYKQRM--EKGLSFLEFNYMIMQSYDFYTL 178

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            + Y C ++ GG DQW N++ G +L  R      +A+T  LL  + G KMGKT SGA+WL
Sbjct: 179 FQKYGCNMEFGGDDQWSNMLGGTELIRRKLGKDAYAMTINLLLNSEGKKMGKTQSGAVWL 238

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           +   T+P+ F+QYWRN+ DADV+   + LT LP+ EID+M   +G ++NEAK+I+A E+T
Sbjct: 239 DPNKTTPFEFFQYWRNVSDADVLKCIRMLTFLPLEEIDKMESWEGAQLNEAKEILAFELT 298

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTN 366
            +VHG EEA KA  A+   F    ++ +MPT++++ ++   G + +++++VKAG   S  
Sbjct: 299 KLVHGEEEATKAKEASHALFAGGANNANMPTVTVTAEDFPDGELDIISVLVKAGLCDSRG 358

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           + RR+++   + + +  I++   +  L DF   G + +  GKK     
Sbjct: 359 DGRRNIQQGGVSVADEKITDISTKYTLDDFKGEG-LIIRRGKKKFAKV 405


>gi|50120866|ref|YP_050033.1| tyrosyl-tRNA synthetase [Pectobacterium atrosepticum SCRI1043]
 gi|81645269|sp|Q6D5V2|SYY_ERWCT RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|49611392|emb|CAG74839.1| tyrosyl-tRNA synthetase [Pectobacterium atrosepticum SCRI1043]
          Length = 425

 Score =  515 bits (1328), Expect = e-144,   Method: Composition-based stats.
 Identities = 160/419 (38%), Positives = 230/419 (54%), Gaps = 11/419 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG I Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q 
Sbjct: 4   SNLIKQLQERGLIAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQL 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
           +GHKP++L+GG T +IGDPSF+   R++  S+ + E +EKI+   S F+ +  GK  A+ 
Sbjct: 64  SGHKPVALVGGATGLIGDPSFKATERKLNTSETVGEWVEKIRRQVSPFLDFDCGKNSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYDF 184
            NN  W  ++  +D LR+IG  FSVN+M+S E+V+ RL R+   +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGNMNVLDFLRDIGKHFSVNQMISKEAVKQRLNRDDVGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K +D  LQ+GGSDQWGNI  GIDL  R+   +++ LT PL+T + GTK GKT  GA
Sbjct: 184 ASLNKQHDVELQIGGSDQWGNITSGIDLTRRMNQKQVYGLTVPLITKSDGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ---GKEINEAKKI 301
           IWL+   TSPY F+Q+W N  DADV  F K  T + +  ID + +     GK    A+ +
Sbjct: 244 IWLDASKTSPYKFYQFWINTADADVYRFLKFFTFMSLENIDALEEEDKNSGKAPR-AQYV 302

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTL 355
           +A ++T MVHG    E A       F  ++          +    +   E+     L   
Sbjct: 303 LAEDVTRMVHGEAGLEAARRITQSLFSGALQDMTQDDFAQLAQDGMPIIELENSADLQQA 362

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +V A    S  +AR  + SNA+ IN    +N +      D        L  GKK++ + 
Sbjct: 363 LVSAELVPSRGQARTMISSNAVTINGEKQANPEYIFSASDRLFDRYTLLRRGKKHYCLI 421


>gi|291165558|gb|EFE27607.1| tyrosine--tRNA ligase [Filifactor alocis ATCC 35896]
          Length = 410

 Score =  515 bits (1328), Expect = e-144,   Method: Composition-based stats.
 Identities = 187/411 (45%), Positives = 254/411 (61%), Gaps = 3/411 (0%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
            +   +L ERGFI Q ++  E+  L  +  VT Y GYD TA SLH GH  Q M +  LQ 
Sbjct: 2   KNVYDVLLERGFIAQTTHEEEIRELLGKEKVTFYTGYDPTADSLHVGHFLQAMAMRHLQL 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+PI L+GGGT++IGDPS R + R MM  + I+ N E  K   S FI +   K  A+M
Sbjct: 62  AGHRPIILIGGGTAMIGDPSGRSDMRSMMTEETIRHNSECFKKQLSKFIDFTDDK--AIM 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  WL  ++YI  +R+IG  FSVNRMLS +  ++R++ E  LSFLEFNYM++QAYDF 
Sbjct: 120 VNNADWLMKLEYIPFIRDIGVHFSVNRMLSADCFKTRMQSEAGLSFLEFNYMLMQAYDFY 179

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           +L + YDC+L+ GG DQW NII G DL  R      + +T  LLT + G KMGKT+SGA+
Sbjct: 180 KLNELYDCKLEFGGDDQWSNIIAGTDLIRRKTAKSAYGMTFQLLTRSDGVKMGKTMSGAV 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
           WL+ E TSPY+F+QYWRNI+DA V      LT LPM E+ R+  LQ  EIN+AK+++A E
Sbjct: 240 WLDPEKTSPYDFYQYWRNIEDASVEKCLALLTFLPMEEVRRLGALQDAEINKAKEVLAFE 299

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           +T +VH  EEA KA  AA + F     S   PT  ++K+E+ +G+G+L L+ + G + S 
Sbjct: 300 VTKIVHSEEEAIKAQEAARQLFGKGGTSADAPTTELTKEELEQGIGILDLLKQVGLSPSN 359

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +E RR +   ++ +N+ II   K  I    F   G I L  GKK      +
Sbjct: 360 SEGRRLVMQGSVAVNDEIIKEPKTIIDDS-FLQDGVIMLRKGKKKFHQIKM 409


>gi|325663618|ref|ZP_08152025.1| tyrosyl-tRNA synthetase [Lachnospiraceae bacterium 4_1_37FAA]
 gi|331087136|ref|ZP_08336207.1| tyrosyl-tRNA synthetase [Lachnospiraceae bacterium 9_1_43BFAA]
 gi|325470304|gb|EGC73536.1| tyrosyl-tRNA synthetase [Lachnospiraceae bacterium 4_1_37FAA]
 gi|330409105|gb|EGG88562.1| tyrosyl-tRNA synthetase [Lachnospiraceae bacterium 9_1_43BFAA]
          Length = 407

 Score =  515 bits (1327), Expect = e-144,   Method: Composition-based stats.
 Identities = 181/405 (44%), Positives = 250/405 (61%), Gaps = 7/405 (1%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG I Q+++   +  L ++G  T YIG+D TA SLH GH   L L+  LQ  G
Sbjct: 3   IYDELKARGLIAQVTDEELISNLINEGKATFYIGFDPTADSLHVGHFMALCLMKRLQMAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           +KPI+L+GGGT  IGDPS R + R MM  ++IQ N +  K   S FI +  GK  A+M+N
Sbjct: 63  NKPIALIGGGTGYIGDPSGRTDMRSMMTPEQIQHNCDCFKEQMSKFIDFSEGK--AMMVN 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  + YI+LLRE+G+ FSVNRML+ E  + R+  E+ LSFLEFNYMI+QAYDF  L
Sbjct: 121 NADWLLDLNYIELLREVGAHFSVNRMLTAECYKQRM--EKGLSFLEFNYMIMQAYDFYAL 178

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            + Y C LQ GG DQW N++ G +L  R       A+T  LL  + G KMGKT SGA+WL
Sbjct: 179 YQKYGCNLQFGGDDQWSNMLAGTELIRRKLGKDASAMTITLLLNSEGKKMGKTQSGAVWL 238

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           +   TSP+ F+QYWRNI DADV+   + LT LP+ EID M K +G ++N+AK+I+A E+T
Sbjct: 239 DPNKTSPFEFYQYWRNIADADVLKCIRMLTFLPLEEIDAMDKWEGSQLNQAKEILAYELT 298

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTN 366
            +VHG EEA KA  ++   F    ++ +MPT  + + + + G + +LTL+VK+G   S +
Sbjct: 299 KLVHGEEEAVKAQESSRALFSSG-NAANMPTAELEESDFTEGMIDILTLLVKSGLVPSKS 357

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           EARR ++   + +N   + + K     + FD      L  GKKN 
Sbjct: 358 EARRAVQQGGVSVNGEKVEDIKTAYAPETFDGEDF-VLKRGKKNF 401


>gi|135197|sp|P00952|SYY_BACST RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|157836396|pdb|2TS1|A Chain A, Structure Of Tyrosyl-TRNA SYNTHETASE REFINED AT 2.3
           Angstroms Resolution. Interaction Of The Enzyme With The
           Tyrosyl Adenylate Intermediate
 gi|157836900|pdb|3TS1|A Chain A, Structure Of Tyrosyl-TRNA SYNTHETASE REFINED AT 2.3
           Angstroms Resolution. Interaction Of The Enzyme With The
           Tyrosyl Adenylate Intermediate
          Length = 419

 Score =  515 bits (1327), Expect = e-144,   Method: Composition-based stats.
 Identities = 153/420 (36%), Positives = 229/420 (54%), Gaps = 11/420 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D L+ L  RG ++Q ++   L  L ++  VT Y G+D TA SLH GHL  ++ +   Q+ 
Sbjct: 2   DLLAELQWRGLVNQTTDEDGLRKLLNEERVTLYCGFDPTADSLHIGHLATILTMRRFQQA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI+L+GG T +IGDPS +   R +   + ++    +IK     F+ +      A + 
Sbjct: 62  GHRPIALVGGATGLIGDPSGKKSERTLNAKETVEAWSARIKEQLGRFLDFEADGNPAKIK 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W+  +  I  LR++G  FSVN M++ ESV+SR+  E  +SF EF+YM+LQAYDF+ 
Sbjct: 122 NNYDWIGPLDVITFLRDVGKHFSVNYMMAKESVQSRI--ETGISFTEFSYMMLQAYDFLR 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK-LFALTSPLLTTASGTKMGKTLSGAI 245
           L +   CRLQ+GGSDQWGNI  G++L  + K     F LT PL+T A GTK GKT SG I
Sbjct: 180 LYETEGCRLQIGGSDQWGNITAGLELIRKTKGEARAFGLTIPLVTKADGTKFGKTESGTI 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIA 303
           WL+KE TSPY F+Q+W N DD DV+ + K  T L   EI+ + +   +  E   A+K +A
Sbjct: 240 WLDKEKTSPYEFYQFWINTDDRDVIRYLKYFTFLSKEEIEALEQELREAPEKRAAQKTLA 299

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVS------RGMGLLTLIV 357
            E+T +VHG E   +A   +   F   I +     I     +V         + L+ L+V
Sbjct: 300 EEVTKLVHGEEALRQAIRISEALFSGDIANLTAAEIEQGFKDVPSFVHEGGDVPLVELLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            AG + S  +AR  +++ AI +N   + +    +  +         +  GKK + +    
Sbjct: 360 SAGISPSKRQAREDIQNGAIYVNGERLQDVGAILTAEHRLEGRFTVIRRGKKKYYLIRYA 419


>gi|310829601|ref|YP_003961958.1| tyrosyl-tRNA synthetase [Eubacterium limosum KIST612]
 gi|308741335|gb|ADO38995.1| tyrosyl-tRNA synthetase [Eubacterium limosum KIST612]
          Length = 408

 Score =  515 bits (1327), Expect = e-144,   Method: Composition-based stats.
 Identities = 185/411 (45%), Positives = 265/411 (64%), Gaps = 5/411 (1%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +   +L ERG I Q +N  E+  L     VT YIG+D TA SLH GH  Q+M++  +Q+ 
Sbjct: 3   NVFDVLKERGMIEQCTNEEEIRKLLGSESVTFYIGFDPTADSLHVGHFIQIMVMAHMQRY 62

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI+L+GGGT++IGDPS R + R++M  + I EN EK K +F  F+ +   +  A+M+
Sbjct: 63  GHRPIALIGGGTTMIGDPSGRQDLRQVMTQERIAENGEKFKKVFEKFLTFEDDR--AMMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  + YI+ LR++GS FSVNRML+ E  +SR+  E+ L+FLEFNYM+LQAYDF  
Sbjct: 121 NNAEWLLPLNYIEFLRDVGSHFSVNRMLTAECYKSRM--EKGLTFLEFNYMLLQAYDFYV 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L KNY C++Q GG+DQW NII G +L  R     ++ +T  LLTT+ G KMGKT  GA+W
Sbjct: 179 LHKNYGCKMQFGGNDQWSNIIAGAELVRRKDAQTVYGMTFSLLTTSEGIKMGKTAKGALW 238

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           L+ E TSPY F+QYWRN+ DADV      LT LPM E+ R+  L+G EIN+AK+I+A E+
Sbjct: 239 LDPEKTSPYEFYQYWRNVADADVEKCLAMLTFLPMDEVHRLGSLEGSEINKAKEILAYEV 298

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
           T MVH +E+A+KA  A+   F   + +  +P++ +S+D +  GM +LTL+  AG   S +
Sbjct: 299 TAMVHSKEDADKAQEASRALFAGGVKTDDIPSVDLSRDALGDGMEILTLLDAAGLIPSRS 358

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           E RR ++   I+++ + I++ K  +   DF     I +  GKK +    L 
Sbjct: 359 EGRRLVQQGGIEVDGNKITDIKALVTPADFKDDA-IIVKKGKKVYRQIKLV 408


>gi|333028038|ref|ZP_08456102.1| putative tyrosyl-tRNA synthetase [Streptomyces sp. Tu6071]
 gi|332747890|gb|EGJ78331.1| putative tyrosyl-tRNA synthetase [Streptomyces sp. Tu6071]
          Length = 451

 Score =  515 bits (1327), Expect = e-144,   Method: Composition-based stats.
 Identities = 146/422 (34%), Positives = 232/422 (54%), Gaps = 11/422 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +D +  L  RG   Q ++   L    + G VT Y G+D TA+SLH GHL Q++ +  LQ+
Sbjct: 31  TDIVDDLKWRGLFAQSTDEEALRKALANGPVTFYCGFDPTAASLHVGHLVQVLTVRRLQR 90

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH P++L+GG T  IGDP      R +     I E + +++     F+ +  G + A M
Sbjct: 91  AGHHPLALVGGATGQIGDPRP-TAERTLNDPATIAEWVNRLRAQIEPFLDF-DGPSAARM 148

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  W   +  I  LR+IG  F VN+ML+ ESV  RL+ EQ +S+ EF+Y +LQA DF+
Sbjct: 149 VNNLDWTSGLSAIAFLRDIGKHFRVNKMLTKESVARRLESEQGISYTEFSYQLLQAMDFL 208

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASGTKMGKTLSGA 244
           EL + + C LQ GGSDQWGN+  G+DL  R++   ++ AL +PL+T A GTK GK+ SGA
Sbjct: 209 ELYRRHGCVLQQGGSDQWGNLTAGVDLIHRVEPEAQVHALATPLMTKADGTKFGKSESGA 268

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKII 302
           +WL+  MT+PY F+Q+W N+DD D+  + + L+  P +E++ +     +  +   A++ +
Sbjct: 269 VWLDPAMTTPYAFYQFWLNVDDRDISRYTRILSFRPRAELEELEAVTAERPQARTAQRAL 328

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQ-HMPTI-----SISKDEVSRGMGLLTLI 356
           A E+TT+VHG  +      A+   F     ++    T+      + +  V+    ++ L+
Sbjct: 329 AEELTTLVHGEAQTRAVVAASRALFGQGELAELDEATLAAALGELPRASVAEPASVVDLL 388

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V+ G   S + ARR +K     +NN+ ++ E       +      + L  GKKN     +
Sbjct: 389 VETGLVASKSAARRTIKEGGAYVNNAKVTAEDAVPAASELLHGRWLVLRRGKKNLAAVEV 448

Query: 417 CG 418
            G
Sbjct: 449 TG 450


>gi|239828058|ref|YP_002950682.1| tyrosyl-tRNA synthetase [Geobacillus sp. WCH70]
 gi|239808351|gb|ACS25416.1| tyrosyl-tRNA synthetase [Geobacillus sp. WCH70]
          Length = 419

 Score =  515 bits (1327), Expect = e-144,   Method: Composition-based stats.
 Identities = 162/422 (38%), Positives = 236/422 (55%), Gaps = 19/422 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D L  L  RG I+Q+++   L  L ++  VT Y G+D TA SLH GHL  ++ L   Q  
Sbjct: 2   DLLQELEWRGLINQVTDKEGLQKLLNEEKVTLYSGFDPTADSLHIGHLLPILTLRRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI+L+GG T +IGDPS +   R +   + +Q+  E+IK   S F+ +   +  A + 
Sbjct: 62  GHRPIALVGGATGLIGDPSGKKSERTLNAKETVQQWSERIKEQLSRFLDFDAKENPAKIA 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W+ S+  I  LR++G  F +N ML+ ESV+SR+  E  +SF EF+YMILQ+ DF++
Sbjct: 122 NNYDWIGSLDVITFLRDVGKNFGLNYMLAKESVQSRI--ETGISFTEFSYMILQSLDFLK 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKT-PKLFALTSPLLTTASGTKMGKTLSGAI 245
           L +N  CRLQ+GGSDQWGNI  G++L  + +   K F LT PL+T A GTK GKT SGAI
Sbjct: 180 LYQNEQCRLQIGGSDQWGNITAGLELIRKTEGDAKAFGLTVPLVTKADGTKFGKTESGAI 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIA 303
           WL++E TSPY F+Q+W N DD DV+ + K  T L   EI+ + K   K      A+K +A
Sbjct: 240 WLDREKTSPYEFYQFWINTDDRDVIKYLKYFTFLSKEEIEELEKQLQKAPEQRAAQKALA 299

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLL 353
            E+T +VHG E  ++A   +   F  S+            + +P+     +EV     L+
Sbjct: 300 EEMTKLVHGEEALKQAIRISEALFSGSVSQLTAEEIEQGFKDVPSFEYKGEEV----PLV 355

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            L+V A    S  +AR  + + AI IN   I +    I  ++        +  GKK + +
Sbjct: 356 ELLVMAKIVPSKRQAREDITNGAIYINGERIQDVNAVITKENRIEGRFTIIRRGKKKYYL 415

Query: 414 CH 415
             
Sbjct: 416 IR 417


>gi|200389646|ref|ZP_03216257.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|199602091|gb|EDZ00637.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
          Length = 424

 Score =  515 bits (1327), Expect = e-144,   Method: Composition-based stats.
 Identities = 159/419 (37%), Positives = 235/419 (56%), Gaps = 11/419 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 4   SNLIKQLQERGLVAQVTDEDALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +QE + KI+   + F+ +  G+  A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVAKIRKQVAPFLDFDCGENSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDF 184
            NN  W  S+  +  LR+IG  FSVN+M++ E+V+ RL R +Q +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGSMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDQGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K +   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 184 ACLNKLHGVALQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI   +   K  GK    A+ +
Sbjct: 244 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMDIEEINALEEEDKNSGKAPR-AQYV 302

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTL 355
           +A ++T +VHG E    A       F  S+ +      + +    +   E+ +G  L+  
Sbjct: 303 LAEQVTRLVHGEEGLVAAKRITECLFSGSLSALSEADFEQLAQDGVPMVEMEKGADLMQA 362

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +V A    S  +AR+ + SNA+ IN     + +     +D        L  GKKN+ + 
Sbjct: 363 LVDAELQPSRGQARKTIASNAVTINGEKQPDPEYIFNDEDRLFGRYTLLRRGKKNYCLI 421


>gi|161503459|ref|YP_001570571.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. arizonae
           serovar 62:z4,z23:-- str. RSK2980]
 gi|189029769|sp|A9MEH2|SYY_SALAR RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|160864806|gb|ABX21429.1| hypothetical protein SARI_01533 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 428

 Score =  515 bits (1327), Expect = e-144,   Method: Composition-based stats.
 Identities = 160/419 (38%), Positives = 236/419 (56%), Gaps = 11/419 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 8   SNLIKQLQERGLVAQVTDEDALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 67

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +QE + KI+   + F+ +  G+  A+ 
Sbjct: 68  AGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVAKIRKQVAPFLDFDCGENSAIA 127

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDF 184
            NN  W  S+  +  LR+IG  FSVN+M++ E+V+ RL R +Q +SF EF+Y +LQ YDF
Sbjct: 128 ANNYDWFGSMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDQGISFTEFSYNLLQGYDF 187

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K +   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 188 ACLNKLHGVALQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 247

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI   +   K  GK    A+ +
Sbjct: 248 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMDIEEINALEEEDKNSGKAPR-AQYV 306

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTL 355
           +A ++T +VHG E    A       F+ S+        + +    +   E+ +G  L+  
Sbjct: 307 LAEQVTRLVHGEEGLIAAKRITESLFNGSLGELSEADFEQLAQDGVPMIELEKGTDLMQA 366

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +V A    S  +AR+ + SNA+ IN    S+ +     +D        L  GKKN+ + 
Sbjct: 367 LVDAELQPSRGQARKTIASNAVTINGEKQSDPEYIFNDEDRLFGRYTLLRRGKKNYCLI 425


>gi|51596607|ref|YP_070798.1| tyrosyl-tRNA synthetase [Yersinia pseudotuberculosis IP 32953]
 gi|153948792|ref|YP_001400748.1| tyrosyl-tRNA synthetase [Yersinia pseudotuberculosis IP 31758]
 gi|170024120|ref|YP_001720625.1| tyrosyl-tRNA synthetase [Yersinia pseudotuberculosis YPIII]
 gi|186895666|ref|YP_001872778.1| tyrosyl-tRNA synthetase [Yersinia pseudotuberculosis PB1/+]
 gi|81639259|sp|Q66A49|SYY_YERPS RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|189029782|sp|A7FHM0|SYY_YERP3 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|254765191|sp|B2K5H0|SYY_YERPB RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|254765193|sp|B1JJR1|SYY_YERPY RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|51589889|emb|CAH21521.1| tyrosyl-tRNA synthetase [Yersinia pseudotuberculosis IP 32953]
 gi|152960287|gb|ABS47748.1| tyrosyl-tRNA synthetase [Yersinia pseudotuberculosis IP 31758]
 gi|169750654|gb|ACA68172.1| tyrosyl-tRNA synthetase [Yersinia pseudotuberculosis YPIII]
 gi|186698692|gb|ACC89321.1| tyrosyl-tRNA synthetase [Yersinia pseudotuberculosis PB1/+]
          Length = 424

 Score =  515 bits (1326), Expect = e-144,   Method: Composition-based stats.
 Identities = 158/419 (37%), Positives = 229/419 (54%), Gaps = 11/419 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG ++ Y G+D TA SLH GHL  L+ L   Q 
Sbjct: 4   SNLIKQLQERGLVAQVTDEDALAERLAQGPISLYCGFDPTADSLHLGHLVPLLCLKRFQL 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+P++L+GG T +IGDPSF+   R++     + E +EKI+   S F+ +  G+  A+ 
Sbjct: 64  AGHRPVALVGGATGMIGDPSFKASERKLNTEDTVNEWVEKIRHQVSPFLDFDCGENSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYDF 184
            NN  W   +  +  LR+IG  FSVN+M++ E+V+ RL R+   +SF EF+Y +LQAYDF
Sbjct: 124 ANNYDWFGGMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDSGISFTEFSYNLLQAYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L KN+   LQ+GGSDQWGNI  GIDL  RL   +++ LT PL+T A GTK GKT  GA
Sbjct: 184 ACLNKNHGVALQIGGSDQWGNITSGIDLTRRLHQQQVYGLTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI   +   K  GK    A+ +
Sbjct: 244 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSLEEINALEEEDKNSGKAPR-AQYV 302

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTL 355
           +A  +T MVHG E    A       F   +H         +    +   E++R   L   
Sbjct: 303 LAENVTGMVHGPEGLAAAKRITESLFSGDLHDMTEADFAQLAQDGMPTVELNRDADLQQA 362

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +V A    S  +AR  + SNA+ IN    ++ +      D        L  GKK++ + 
Sbjct: 363 LVNAELVPSRGQARTMIGSNAVAINGEKQADPEYVFTDADRLFGRYTLLRRGKKHYCLI 421


>gi|291520806|emb|CBK79099.1| tyrosyl-tRNA synthetase [Coprococcus catus GD/7]
          Length = 407

 Score =  515 bits (1326), Expect = e-144,   Method: Composition-based stats.
 Identities = 174/405 (42%), Positives = 255/405 (62%), Gaps = 7/405 (1%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG I Q+++  E+  L + G  T YIG+D TA SLH GH   L L+  LQ  G
Sbjct: 3   LYDELVARGLIAQVTDEEEIKELINNGKATFYIGFDPTADSLHVGHFMALCLMKRLQMAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           ++PI+L+GGGT++IGDPS R + R+MM  + IQ N++  K   S FI +  GK  ALM+N
Sbjct: 63  NRPIALIGGGTAMIGDPSGRTDMRQMMTPETIQHNVDCFKKQMSRFIDFSDGK--ALMVN 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL ++ YI+LLR++G+ FSVNRML+ E  + R++R   LSFLEFNYMI+Q+YDF EL
Sbjct: 121 NADWLMNLNYIELLRDVGAHFSVNRMLTAECYKQRMER--GLSFLEFNYMIMQSYDFYEL 178

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            + Y C LQ GG DQW N++ G +L  R       A+T  LL  + G KMGKT SGA+WL
Sbjct: 179 FQRYGCNLQFGGDDQWSNMLGGTELIRRKLGKNASAMTITLLLNSEGKKMGKTQSGAVWL 238

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           +   TSP++F+QYWRN+ DADV+   + LT LP+ +ID M K +G ++N+AK+I+A E+T
Sbjct: 239 DPNKTSPFDFYQYWRNVGDADVLKCLRMLTFLPLEQIDEMDKWEGSQLNQAKEILAFELT 298

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTN 366
            +VHG EEA KA  +A   F     +  MPT ++++ ++  G + +L ++V AG   + +
Sbjct: 299 KLVHGEEEATKAQESARALFSAG-SAADMPTTTLTEADLRDGSVDILGILVAAGLCPTRS 357

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           EARR+++   + +N   +++ K     +D      +    GKK +
Sbjct: 358 EARRNVQQGGVTVNGEKVTDFKAAYTPEDIMKEDFVV-RRGKKKY 401


>gi|297529039|ref|YP_003670314.1| tyrosyl-tRNA synthetase [Geobacillus sp. C56-T3]
 gi|297252291|gb|ADI25737.1| tyrosyl-tRNA synthetase [Geobacillus sp. C56-T3]
          Length = 419

 Score =  514 bits (1325), Expect = e-144,   Method: Composition-based stats.
 Identities = 153/420 (36%), Positives = 230/420 (54%), Gaps = 11/420 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D L+ L  RG ++Q ++   L  L ++  VT Y G+D TA SLH G+L  ++ L   Q+ 
Sbjct: 2   DLLAELQWRGLVNQTTDEDGLRKLLNEERVTLYCGFDPTADSLHIGNLAAILTLRRFQQA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI+L+GG T +IGDPS +   R +   + ++    +I+   S F+ +      A + 
Sbjct: 62  GHQPIALVGGATGLIGDPSGKKSERTLNAKETVEAWSARIQEQLSRFLDFEAHGNPAKIK 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W+  +  I  LR++G  FSVN M++ ESV+SR+  E  +SF EF+YM+LQAYDF+ 
Sbjct: 122 NNYDWIGPLDVITFLRDVGKHFSVNYMMAKESVQSRI--ETGISFTEFSYMMLQAYDFLR 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK-LFALTSPLLTTASGTKMGKTLSGAI 245
           L +   CRLQ+GGSDQWGNI  G++L  + K     F LT PL+T A GTK GKT SG I
Sbjct: 180 LYETEGCRLQIGGSDQWGNITAGLELIRKTKGEARAFGLTIPLVTKADGTKFGKTESGTI 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIA 303
           WL+KE TSPY F+Q+W N DD DV+ + K  T L   EI+ + +   +  E   A+K +A
Sbjct: 240 WLDKEKTSPYEFYQFWINTDDRDVIRYLKYFTFLSKEEIEALEQELREAPEKRAAQKALA 299

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVS------RGMGLLTLIV 357
            E+T +VHG E   +A   +   F   I +     I     +V         + L+ L+V
Sbjct: 300 EEVTKLVHGEEALRQAIRISEALFSGDIANLTAAEIEQGFKDVPSFVHEGGDVPLVELLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            AG + S  +AR  +++ AI +N   + +    +  +         +  GKK + +    
Sbjct: 360 SAGISPSKRQAREDIQNGAIYVNGERLQDVGAILTAEHRLEGRFTVIRRGKKKYYLIRYA 419


>gi|291542996|emb|CBL16106.1| tyrosyl-tRNA synthetase [Ruminococcus bromii L2-63]
          Length = 408

 Score =  514 bits (1325), Expect = e-144,   Method: Composition-based stats.
 Identities = 179/412 (43%), Positives = 261/412 (63%), Gaps = 6/412 (1%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
                L  RG I Q+++  E+  L + G  T YIG+D TA SLH GH   L L+  LQ  
Sbjct: 2   GVYEELVARGLIAQVTDQEEIRELVNSGKATFYIGFDPTADSLHVGHFMALCLMKRLQMA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           G+KPI+L+GGGT +IGDPS R + R+MM  + IQ N++  K   S FI +  GK  AL++
Sbjct: 62  GNKPIALVGGGTGMIGDPSGRTDMRQMMTKETIQHNVDCFKKQMSRFIDFSDGK--ALLV 119

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  + Y++LLR++G+ FSVN ML  E  + R+  E+ LSFLEFNYMI+Q+YDF  
Sbjct: 120 NNADWLLDLNYVELLRDVGACFSVNNMLRAECYKQRM--EKGLSFLEFNYMIMQSYDFYA 177

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + Y C +Q GG DQW N++ G +L  R      +A+T  LL  + G KMGKT SGA+W
Sbjct: 178 LYQKYGCNMQFGGDDQWSNMLGGTELIRRKLGKNAYAMTINLLLNSEGKKMGKTQSGAVW 237

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           L+ E TSPY+F+QYWRN+DD DV+   K LT LP+ EID +AKL+G EIN+AK+I+A E+
Sbjct: 238 LSAEKTSPYDFYQYWRNVDDGDVIKCLKMLTFLPLEEIDELAKLEGSEINKAKEILAHEL 297

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATST 365
           T +VHG+EEA+KA  AA   F    ++ +MP+ ++++ + + G +G+L L+ K G   S 
Sbjct: 298 TELVHGKEEADKAQEAARAIFSNKTNTDNMPSTTLTEADFADGEIGILDLMKKCGLIPSN 357

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            E RR ++   + +++  +++   ++   DF+  G + +  GKK +    L 
Sbjct: 358 GEGRRLIQQGGVSVDDEKVTDVYAKVAKSDFEK-GYVVIKKGKKVYHKAILV 408


>gi|238895018|ref|YP_002919752.1| tyrosyl-tRNA synthetase [Klebsiella pneumoniae NTUH-K2044]
 gi|238547334|dbj|BAH63685.1| tyrosyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
           NTUH-K2044]
          Length = 424

 Score =  514 bits (1324), Expect = e-143,   Method: Composition-based stats.
 Identities = 159/419 (37%), Positives = 235/419 (56%), Gaps = 11/419 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 4   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++     +QE ++KI+   + F+ +  G   A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTEDTVQEWVDKIRKQVAPFLDFDCGDNSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDF 184
            NN  W  S+  +  LR+IG  FSVN+M++ E+V+ RL R +Q +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGSMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDQGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K +   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 184 ACLNKLHGVALQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI   +   K  GK    A+ +
Sbjct: 244 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMDIVEINALEEEDKNSGKAPR-AQYV 302

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTL 355
           +A ++T +VHG E  E A       F+ ++        + +    +   E+ +G  LL  
Sbjct: 303 LAEQVTRLVHGEEGLEAAKRITESLFNGNLSDLSEADFEQLAQDGVPMIEMEKGADLLQA 362

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +V +    S  +AR+ + SNA+ IN    ++ +      D        L  GKKN+ + 
Sbjct: 363 LVDSELQPSRGQARKTVASNAVTINGEKQADPEYVFADSDRLFGRYTLLRRGKKNYCLV 421


>gi|108807710|ref|YP_651626.1| tyrosyl-tRNA synthetase [Yersinia pestis Antiqua]
 gi|108811988|ref|YP_647755.1| tyrosyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|145598080|ref|YP_001162156.1| tyrosyl-tRNA synthetase [Yersinia pestis Pestoides F]
 gi|149365720|ref|ZP_01887755.1| tyrosyl-tRNA synthetase [Yersinia pestis CA88-4125]
 gi|162419738|ref|YP_001606965.1| tyrosyl-tRNA synthetase [Yersinia pestis Angola]
 gi|165926417|ref|ZP_02222249.1| tyrosyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165938656|ref|ZP_02227212.1| tyrosyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           IP275]
 gi|166010702|ref|ZP_02231600.1| tyrosyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166211045|ref|ZP_02237080.1| tyrosyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|167400938|ref|ZP_02306444.1| tyrosyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167422142|ref|ZP_02313895.1| tyrosyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167424859|ref|ZP_02316612.1| tyrosyl-tRNA synthetase [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|218929460|ref|YP_002347335.1| tyrosyl-tRNA synthetase [Yersinia pestis CO92]
 gi|229837891|ref|ZP_04458050.1| tyrosyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229895051|ref|ZP_04510228.1| tyrosyl-tRNA synthetase [Yersinia pestis Pestoides A]
 gi|229898454|ref|ZP_04513600.1| tyrosyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229902297|ref|ZP_04517417.1| tyrosyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|294503624|ref|YP_003567686.1| tyrosyl-tRNA synthetase [Yersinia pestis Z176003]
 gi|81518040|sp|Q8ZE20|SYY_YERPE RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|122979598|sp|Q1C791|SYY_YERPA RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|122980157|sp|Q1CIM5|SYY_YERPN RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|189029783|sp|A4TIS1|SYY_YERPP RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|254765192|sp|A9QZ95|SYY_YERPG RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|108775636|gb|ABG18155.1| tyrosyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|108779623|gb|ABG13681.1| tyrosyl-tRNA synthetase [Yersinia pestis Antiqua]
 gi|115348071|emb|CAL20997.1| tyrosyl-tRNA synthetase [Yersinia pestis CO92]
 gi|145209776|gb|ABP39183.1| tyrosyl-tRNA synthetase [Yersinia pestis Pestoides F]
 gi|149292133|gb|EDM42207.1| tyrosyl-tRNA synthetase [Yersinia pestis CA88-4125]
 gi|162352553|gb|ABX86501.1| tyrosyl-tRNA synthetase [Yersinia pestis Angola]
 gi|165913530|gb|EDR32151.1| tyrosyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           IP275]
 gi|165921638|gb|EDR38835.1| tyrosyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165990404|gb|EDR42705.1| tyrosyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166208225|gb|EDR52705.1| tyrosyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|166958954|gb|EDR55975.1| tyrosyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167049791|gb|EDR61199.1| tyrosyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167056046|gb|EDR65824.1| tyrosyl-tRNA synthetase [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|229680632|gb|EEO76728.1| tyrosyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|229688498|gb|EEO80568.1| tyrosyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229694257|gb|EEO84304.1| tyrosyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229701939|gb|EEO89961.1| tyrosyl-tRNA synthetase [Yersinia pestis Pestoides A]
 gi|262361667|gb|ACY58388.1| tyrosyl-tRNA synthetase [Yersinia pestis D106004]
 gi|262365593|gb|ACY62150.1| tyrosyl-tRNA synthetase [Yersinia pestis D182038]
 gi|294354083|gb|ADE64424.1| tyrosyl-tRNA synthetase [Yersinia pestis Z176003]
 gi|320015023|gb|ADV98594.1| tyrosyl-tRNA synthetase [Yersinia pestis biovar Medievalis str.
           Harbin 35]
          Length = 424

 Score =  514 bits (1324), Expect = e-143,   Method: Composition-based stats.
 Identities = 158/419 (37%), Positives = 229/419 (54%), Gaps = 11/419 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG ++ Y G+D TA SLH GHL  L+ L   Q 
Sbjct: 4   SNLIKQLQERGLVAQVTDEDALAERLAQGPISLYCGFDPTADSLHLGHLVPLLCLKRFQL 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+P++L+GG T +IGDPSF+   R++     + E +EKI+   S F+ +  G+  A+ 
Sbjct: 64  AGHRPVALVGGATGMIGDPSFKASERKLNTEDTVNEWVEKIRHQVSPFLDFDCGENSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYDF 184
            NN  W   +  +  LR+IG  FSVN+M++ E+V+ RL R+   +SF EF+Y +LQAYDF
Sbjct: 124 ANNYDWFGGMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDSGISFTEFSYNLLQAYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L KN+   LQ+GGSDQWGNI  GIDL  RL   +++ LT PL+T A GTK GKT  GA
Sbjct: 184 ACLNKNHGVALQIGGSDQWGNITSGIDLTRRLHQQQVYGLTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI   +   K  GK    A+ +
Sbjct: 244 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSLEEINALEEEDKNSGKAPR-AQYV 302

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTL 355
           +A  +T MVHG E    A       F   +H         +    +   E++R   L   
Sbjct: 303 LAENVTGMVHGPEGLAAAKRITDSLFSGDLHDMTEADFAQLAQDGMPTVELNRDADLQQA 362

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +V A    S  +AR  + SNA+ IN    ++ +      D        L  GKK++ + 
Sbjct: 363 LVNAELVPSRGQARTMIGSNAVAINGEKQADPEYVFTDADRLFGRYTLLRRGKKHYCLI 421


>gi|238922616|ref|YP_002936129.1| tyrosyl-tRNA synthetase [Eubacterium rectale ATCC 33656]
 gi|238874288|gb|ACR73995.1| tyrosyl-tRNA synthetase [Eubacterium rectale ATCC 33656]
          Length = 428

 Score =  514 bits (1324), Expect = e-143,   Method: Composition-based stats.
 Identities = 172/408 (42%), Positives = 257/408 (62%), Gaps = 6/408 (1%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG I Q+++ +E+  L + G  T YIG+D TA SLH GH   L L+  LQ  G
Sbjct: 23  IYDELVARGLIAQVTDEKEIKELINNGKATFYIGFDPTADSLHVGHFMALCLMKRLQMAG 82

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           +KPI L+GGGT+ IGDPS R + R+MM ++ I  N+E  K   S FI +G GK  A+M+N
Sbjct: 83  NKPIVLIGGGTAQIGDPSGRTDMRQMMTTETINHNVECFKKQMSRFIDFGEGK--AIMVN 140

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  + Y+D+LRE+G+ FSVNRML+ E  + R+  E+ LSFLEFNYMI+Q+YDF  L
Sbjct: 141 NADWLMDLNYVDVLREVGAHFSVNRMLTAECYKQRM--EKGLSFLEFNYMIMQSYDFYTL 198

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            + Y C ++ GG DQW N++ G +L  R      +A+T  LL  + G KMGKT SGA+WL
Sbjct: 199 FQKYGCNMEFGGDDQWSNMLGGTELIRRKLGKDAYAMTINLLLNSEGKKMGKTQSGAVWL 258

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           +   T+P+ F+QYWRN+ DADV+   + LT LP+ EID+M   +G ++NEAK+I+A E+T
Sbjct: 259 DPNKTTPFEFFQYWRNVSDADVLKCIRMLTFLPLEEIDKMESWEGAQLNEAKEILAFELT 318

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTN 366
            +VHG EEA KA  A+   F    ++ +MPT++++ ++   G + +++++VKAG   S  
Sbjct: 319 KLVHGEEEATKAKEASHALFAGGANNANMPTVTVTAEDFPDGELDIISVLVKAGLCDSRG 378

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           + RR+++   + + +  +++   +  L DF   G + +  GKK     
Sbjct: 379 DGRRNIQQGGVSVADEKVTDISTKYTLDDFKGEG-LIIRRGKKKFAKV 425


>gi|254487653|ref|ZP_05100858.1| tyrosyl-tRNA synthetase [Roseobacter sp. GAI101]
 gi|214044522|gb|EEB85160.1| tyrosyl-tRNA synthetase [Roseobacter sp. GAI101]
          Length = 416

 Score =  514 bits (1324), Expect = e-143,   Method: Composition-based stats.
 Identities = 214/412 (51%), Positives = 286/412 (69%), Gaps = 2/412 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KS+F+ I+ ERGF+   ++ + LD    +G   AYIG+D TA SLH G L Q+M+L WLQ
Sbjct: 6   KSEFIRIMMERGFVADCTDYQGLDEALLKGAQPAYIGFDATAKSLHVGSLIQIMMLRWLQ 65

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           KTG KPI+LMGGGT+ +GDPSFR + R ++ S++I +NI  IK +FS+++ YG G +DA 
Sbjct: 66  KTGGKPITLMGGGTTKVGDPSFRADERPLLTSEQIDDNISGIKKVFSAYLTYGDGPSDAQ 125

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M+NN  WL  + Y+D LR+IG  FS+NRMLSFESV+SRL REQSLSFLEFNYMILQAYDF
Sbjct: 126 MINNAEWLDGLNYLDFLRDIGRHFSINRMLSFESVKSRLDREQSLSFLEFNYMILQAYDF 185

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL + Y C LQMGGSDQWGNI+ GIDL  R+   +++ LT+PLLTT+ G KMGK+ SGA
Sbjct: 186 MELHRRYGCILQMGGSDQWGNIVNGIDLTRRVIDGEVYGLTTPLLTTSDGKKMGKSQSGA 245

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           IWLN +M SPY FWQ+WRN  DADV  F K  T LP+ E DR+  L+G EINEAK  +A 
Sbjct: 246 IWLNPDMLSPYEFWQFWRNTTDADVGRFLKLYTELPIDECDRLGALEGSEINEAKIRLAN 305

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E+T ++HG + A  A   A E F+       +PT+++S  ++  GM ++ LIVK+G A S
Sbjct: 306 EVTALLHGADAAAAAEATAREVFEKGGVGDDLPTLTLSPSDIGDGMSIVQLIVKSGLAGS 365

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             EA+R +  N  +IN+  +++  + I     ++   IKLS GKK H +  L
Sbjct: 366 GKEAKRLISENGARINDEPLTDAGMMIDAAALETP--IKLSAGKKRHALVQL 415


>gi|16126113|ref|NP_420677.1| tyrosyl-tRNA synthetase [Caulobacter crescentus CB15]
 gi|81535267|sp|Q9A756|SYY_CAUCR RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|254783578|sp|B8GWL9|SYY_CAUCN RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|13423313|gb|AAK23845.1| tyrosyl-tRNA synthetase [Caulobacter crescentus CB15]
 gi|220964055|gb|ACL95411.1| tyrosyl-tRNA synthetase [Caulobacter crescentus NA1000]
          Length = 419

 Score =  513 bits (1323), Expect = e-143,   Method: Composition-based stats.
 Identities = 204/414 (49%), Positives = 275/414 (66%), Gaps = 1/414 (0%)

Query: 2   PAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
            +FKS+FL  L  RG+IHQI++  ELD     G + AYIG+D TA SLH G L Q+MLL 
Sbjct: 5   SSFKSEFLRTLEARGYIHQITHADELDTAAQGGPIVAYIGFDATAPSLHVGSLIQIMLLR 64

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKT 121
            LQ+ GHKPI LMGGGT+ +GDP+ +DESR+++   +IQ NI  IK +FS F+ +G G T
Sbjct: 65  RLQQAGHKPIVLMGGGTTKVGDPTGKDESRKLLSDADIQANIAGIKTVFSKFLTFGDGPT 124

Query: 122 DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA 181
           DA+M++N+ WL    Y+  LRE G  F+VNRML+F+SV+ RL+REQ ++FLEFNYM++QA
Sbjct: 125 DAIMVDNDVWLSKFGYVQFLREYGVHFTVNRMLAFDSVKLRLEREQPMTFLEFNYMLMQA 184

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            DF+EL + + C LQMGGSDQWGNI+ G++L  R+     F LT+PLL TASG KMGKT 
Sbjct: 185 VDFLELNRAHGCVLQMGGSDQWGNILNGVELTRRVDQKSAFGLTTPLLATASGAKMGKTA 244

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKI 301
           +GA+WLN E  SPY++WQ+WRN +DADV  F K  T LP+  I  +  L+G +INEAKK+
Sbjct: 245 AGAVWLNAEQLSPYDYWQFWRNTEDADVGRFLKLFTDLPLDRIAELEALEGAQINEAKKV 304

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGF 361
           +A E T M HG EEA KA  AA + F+    S  +PT  I+  ++  G+ L  L   AG 
Sbjct: 305 LADEATRMAHGEEEARKARDAAEKAFEQGALSADLPTYEIAAADLDAGVVLAALFADAGL 364

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           A S  EARR  +   +K+N+   ++    I   D    G +KL+ GKK  ++  
Sbjct: 365 AGSRGEARRLAQGGGLKVNDKAEADANRLITAADLV-EGVVKLAAGKKKIVLVK 417


>gi|332161675|ref|YP_004298252.1| tyrosyl-tRNA synthetase [Yersinia enterocolitica subsp. palearctica
           105.5R(r)]
 gi|325665905|gb|ADZ42549.1| tyrosyl-tRNA synthetase [Yersinia enterocolitica subsp. palearctica
           105.5R(r)]
          Length = 424

 Score =  513 bits (1323), Expect = e-143,   Method: Composition-based stats.
 Identities = 160/424 (37%), Positives = 230/424 (54%), Gaps = 21/424 (4%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG ++ Y G+D TA SLH GHL  L+ L   Q 
Sbjct: 4   SNLIKQLQERGLVAQVTDEDALAERLAQGPISLYCGFDPTADSLHLGHLVPLLCLKRFQL 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+P++L+GG T +IGDPSF+   R++     + E +EKI+   S F+ +  G+  A+ 
Sbjct: 64  AGHRPVALVGGATGMIGDPSFKASERKLNTEDTVNEWVEKIRRQVSPFLDFDCGENSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYDF 184
            NN  W   +  +  LR+IG  FSVN+M++ E+V+ RL R+   +SF EF+Y +LQAYDF
Sbjct: 124 ANNYDWFGGMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDSGISFTEFSYNLLQAYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K +   LQ+GGSDQWGNI  GIDL  RL   +++ LT PL+T A GTK GKT  GA
Sbjct: 184 ACLNKAHGVALQIGGSDQWGNITSGIDLTRRLHQQQVYGLTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI   +   K  GK    A+ +
Sbjct: 244 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSLEEINALEEEDKNSGKAPR-AQYV 302

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS-----------QHMPTISISKDEVSRGM 350
           +A  +T MVHG E    A       F   ++              MPTI +++D      
Sbjct: 303 LAENVTGMVHGEEGLAAAKRITASLFSGDLNDMTEADFAQLAQDGMPTIELTRD-----A 357

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            L   +V A    S  +AR  + SNA+ IN    S+ +      D        L  GKK+
Sbjct: 358 DLQQALVNAELVPSRGQARTMISSNAVAINGEKQSDPEYAFTDADRLFGRYTLLRRGKKH 417

Query: 411 HIIC 414
           + + 
Sbjct: 418 YCLI 421


>gi|22125858|ref|NP_669281.1| tyrosyl-tRNA synthetase [Yersinia pestis KIM 10]
 gi|45441947|ref|NP_993486.1| tyrosyl-tRNA synthetase [Yersinia pestis biovar Microtus str.
           91001]
 gi|21958790|gb|AAM85532.1|AE013799_7 tyrosine tRNA synthetase [Yersinia pestis KIM 10]
 gi|45436810|gb|AAS62363.1| tyrosine tRNA synthetase [Yersinia pestis biovar Microtus str.
           91001]
          Length = 428

 Score =  513 bits (1323), Expect = e-143,   Method: Composition-based stats.
 Identities = 158/419 (37%), Positives = 229/419 (54%), Gaps = 11/419 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG ++ Y G+D TA SLH GHL  L+ L   Q 
Sbjct: 8   SNLIKQLQERGLVAQVTDEDALAERLAQGPISLYCGFDPTADSLHLGHLVPLLCLKRFQL 67

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+P++L+GG T +IGDPSF+   R++     + E +EKI+   S F+ +  G+  A+ 
Sbjct: 68  AGHRPVALVGGATGMIGDPSFKASERKLNTEDTVNEWVEKIRHQVSPFLDFDCGENSAIA 127

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYDF 184
            NN  W   +  +  LR+IG  FSVN+M++ E+V+ RL R+   +SF EF+Y +LQAYDF
Sbjct: 128 ANNYDWFGGMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDSGISFTEFSYNLLQAYDF 187

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L KN+   LQ+GGSDQWGNI  GIDL  RL   +++ LT PL+T A GTK GKT  GA
Sbjct: 188 ACLNKNHGVALQIGGSDQWGNITSGIDLTRRLHQQQVYGLTVPLITKADGTKFGKTEGGA 247

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI   +   K  GK    A+ +
Sbjct: 248 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSLEEINALEEEDKNSGKAPR-AQYV 306

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTL 355
           +A  +T MVHG E    A       F   +H         +    +   E++R   L   
Sbjct: 307 LAENVTGMVHGPEGLAAAKRITDSLFSGDLHDMTEADFAQLAQDGMPTVELNRDADLQQA 366

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +V A    S  +AR  + SNA+ IN    ++ +      D        L  GKK++ + 
Sbjct: 367 LVNAELVPSRGQARTMIGSNAVAINGEKQADPEYVFTDADRLFGRYTLLRRGKKHYCLI 425


>gi|269139039|ref|YP_003295740.1| tyrosyl-tRNA synthetase [Edwardsiella tarda EIB202]
 gi|267984700|gb|ACY84529.1| tyrosyl-tRNA synthetase [Edwardsiella tarda EIB202]
          Length = 424

 Score =  513 bits (1323), Expect = e-143,   Method: Composition-based stats.
 Identities = 153/419 (36%), Positives = 228/419 (54%), Gaps = 11/419 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 4   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +Q  ++KI+   + F+ +  G   A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKATERKLNTEETVQSWVDKIRRQVAPFLDFDCGSNSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYDF 184
            NN  W   +  +  LR+IG  FSVN+M++ E+V+ RL R+   +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGGMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDVGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L + +   LQ+GGSDQWGNI  GIDL  R+   +++ LT PL+T A GTK GKT  GA
Sbjct: 184 ASLNRMHGVELQIGGSDQWGNITSGIDLTRRMNQQQVWGLTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI   +   K  GK    A+ +
Sbjct: 244 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINALEDEDKNSGKAPR-AQYV 302

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTL 355
           +A  +T +VHG    E A       F  S+          +    +   E+ +G  L   
Sbjct: 303 LAEAVTRLVHGEAGLEAAKRITHSLFSGSLSEMTEADFAQLAQDGMPMVEMDKGADLQQA 362

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +V A    S  +AR+ + SNA+ +N    S+ +      D        L  GKKN+ + 
Sbjct: 363 LVDAELQPSRGQARKTIASNAVTVNGEKQSDPEYTFSDGDRLFGRYTLLRRGKKNYCLI 421


>gi|135196|sp|P04077|SYY_BACCA RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|143793|gb|AAA22877.1| tyrosyl-tRNA synthetase [Bacillus caldotenax]
          Length = 419

 Score =  513 bits (1323), Expect = e-143,   Method: Composition-based stats.
 Identities = 153/420 (36%), Positives = 229/420 (54%), Gaps = 11/420 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D L+ L  RG ++Q ++   L  L ++  VT Y G+D TA SLH G+L  ++ L   Q+ 
Sbjct: 2   DLLAELQWRGLVNQTTDEDGLRKLLNEERVTLYCGFDPTADSLHIGNLAAILTLRRFQQA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI+L+GG T +IGDPS +   R +   + ++    +IK     F+ +      A + 
Sbjct: 62  GHRPIALVGGATGLIGDPSGKKSERTLNAKETVEAWSARIKEQLGRFLDFEADGNPAKIK 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W+  +  I  LR++G  FSVN M++ ESV+SR+  E  +SF EF+YM+LQAYDF+ 
Sbjct: 122 NNYDWIGPLDVITFLRDVGKHFSVNYMMAKESVQSRI--ETGISFTEFSYMMLQAYDFLR 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK-LFALTSPLLTTASGTKMGKTLSGAI 245
           L +   CRLQ+GGSDQWGNI  G++L  + K     F LT PL+T A GTK GKT SG I
Sbjct: 180 LYETEGCRLQIGGSDQWGNITAGLELIRKTKGEARAFGLTIPLVTKADGTKFGKTESGTI 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIA 303
           WL+KE TSPY F+Q+W N DD DV+ + K  T L   EI+ + +   +  E   A+K +A
Sbjct: 240 WLDKEKTSPYEFYQFWINTDDRDVIRYLKYFTFLSKEEIEALEQELREAPEKRAAQKALA 299

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVS------RGMGLLTLIV 357
            E+T +VHG E   +A   +   F   I +     I     +V         + L+ L+V
Sbjct: 300 EEVTKLVHGEEALRQAIRISEALFSGDIANLTAAEIEQGFKDVPSFVHEGGDVPLVELLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            AG + S  +AR  +++ AI +N   + +    +  +         +  GKK + +    
Sbjct: 360 SAGISPSKRQAREDIQNGAIYVNGERLQDVGAILTAEHRLEGRFTVIRRGKKKYYLIRYA 419


>gi|15893925|ref|NP_347274.1| tyrosyl-tRNA synthetase [Clostridium acetobutylicum ATCC 824]
 gi|81531026|sp|Q97LC5|SYY1_CLOAB RecName: Full=Tyrosyl-tRNA synthetase 1; AltName:
           Full=Tyrosine--tRNA ligase 1; Short=TyrRS 1
 gi|15023510|gb|AAK78614.1|AE007579_4 Tyrosyl-tRNA synthetase [Clostridium acetobutylicum ATCC 824]
 gi|325508052|gb|ADZ19688.1| tyrosyl-tRNA synthetase [Clostridium acetobutylicum EA 2018]
          Length = 407

 Score =  513 bits (1323), Expect = e-143,   Method: Composition-based stats.
 Identities = 175/409 (42%), Positives = 262/409 (64%), Gaps = 6/409 (1%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ L  L ERG+  Q ++  E   L S+  VT YIG+D T  SLH GH   LML+  +QK
Sbjct: 2   SNVLDELIERGYAKQFTHEEETRKLLSEEKVTFYIGFDPTGDSLHVGHFIALMLMARMQK 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+PI L+GGGT+++GDP+ + + R+M+  +EI  N+E +K   S FI +   K  A++
Sbjct: 62  AGHRPIVLIGGGTAMVGDPTGKTDMRKMLTREEINHNVECLKKQMSRFIDFSDDK--AII 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  WL    YI+ LRE+G  FSVN+ML+ E  + R+  E+ LSFLEFNYM++Q +DF 
Sbjct: 120 VNNAEWLMGQNYIEFLREVGVHFSVNKMLTAECFKQRM--EKGLSFLEFNYMLMQGFDFY 177

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           +L + YDC++++GG DQW N+I G++L  R    K +A+TS LLT + G KMGKT  GA+
Sbjct: 178 KLNEKYDCKMELGGDDQWSNMIAGVELIRRKSNKKAYAMTSALLTNSEGKKMGKTEKGAL 237

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
           WL+ E TSPY+F+QYWRN++DADV      LT LPM E+ R+A L+ +EIN+AK+++A E
Sbjct: 238 WLDAEKTSPYDFFQYWRNVNDADVEKCLSMLTFLPMDEVRRLASLKDQEINKAKEVLAYE 297

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           +T +VHG EEA+KA  ++   F    +  ++PT+SI +D +S    +L ++V      S 
Sbjct: 298 VTKLVHGEEEAKKALNSSKALFGGGTNMDNVPTVSIPEDMLSS--SILDVLVHTKIIPSK 355

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            E RR ++   I +N++ + +   +I  +DF+  G   +  GKK +   
Sbjct: 356 GEGRRLVQQGGITLNDTKVEDFNYEITKEDFNDDGFALVRRGKKKYYKI 404


>gi|83953766|ref|ZP_00962487.1| tyrosyl-tRNA synthetase [Sulfitobacter sp. NAS-14.1]
 gi|83841711|gb|EAP80880.1| tyrosyl-tRNA synthetase [Sulfitobacter sp. NAS-14.1]
          Length = 416

 Score =  513 bits (1323), Expect = e-143,   Method: Composition-based stats.
 Identities = 211/412 (51%), Positives = 279/412 (67%), Gaps = 2/412 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KSDF+ I+ ERGF+   ++ + LD     G V AYIGYD TA SLH GHL  +M+L WLQ
Sbjct: 6   KSDFIRIMMERGFLADCTDYQGLDDALINGAVPAYIGYDATAKSLHVGHLMNIMVLRWLQ 65

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           K G KPI+LMGGGT+ +GDPSFR + R ++ +  I  NI  ++ +F  ++ YG G +DA+
Sbjct: 66  KCGGKPITLMGGGTTKVGDPSFRSDERPLLDNAAIDANIAGMQQVFEKYLSYGDGDSDAI 125

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           MLNN  WL ++ Y+  LR+IG  FSVNRMLSFESV+SRL REQSLSFLEFNYMILQAYDF
Sbjct: 126 MLNNAEWLDNLNYLAFLRDIGRHFSVNRMLSFESVKSRLDREQSLSFLEFNYMILQAYDF 185

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL + Y C LQMGGSDQWGNI+ GIDL  R+   ++F LT+PLLTT+ G KMGK+  GA
Sbjct: 186 LELNRRYGCLLQMGGSDQWGNIVNGIDLTRRVLDQEIFGLTTPLLTTSDGRKMGKSQGGA 245

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           IWLN +M SPY FWQ+WRN  DAD   F K  T LP+ E DR+  L+G +IN AK I+A 
Sbjct: 246 IWLNGDMLSPYEFWQFWRNTTDADTGKFLKIFTELPVEECDRLGALEGSDINAAKIILAN 305

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E+TT++HG E A+ A   A E F+       +PT+++S  ++  G+ ++ LIVK+G A S
Sbjct: 306 EVTTLLHGAEAAKNAEATAREVFEKGGVGDDLPTLTLSAADIGDGISIVQLIVKSGLAGS 365

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             EA+R +  N  + N+  +++  L +      +   IKLS GKK H +  L
Sbjct: 366 GKEAKRLITENGARYNDEPLTDAGLMVDAATLATP--IKLSAGKKRHALVQL 415


>gi|308174658|ref|YP_003921363.1| tyrosyl-tRNA synthetase [Bacillus amyloliquefaciens DSM 7]
 gi|307607522|emb|CBI43893.1| tyrosyl-tRNA synthetase [Bacillus amyloliquefaciens DSM 7]
 gi|328554588|gb|AEB25080.1| tyrosyl-tRNA synthetase [Bacillus amyloliquefaciens TA208]
 gi|328912992|gb|AEB64588.1| tyrosyl-tRNA synthetase [Bacillus amyloliquefaciens LL3]
          Length = 421

 Score =  513 bits (1322), Expect = e-143,   Method: Composition-based stats.
 Identities = 155/423 (36%), Positives = 238/423 (56%), Gaps = 19/423 (4%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           ++ L  LS RG I Q+++   L+   ++  +  Y G+D TA SLH GHL  ++ L   Q 
Sbjct: 2   TNLLEDLSFRGLIQQMTDEEGLNKQLNEEKIRLYSGFDPTADSLHIGHLLPILTLRRFQL 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH PI+L+GG T +IGDPS +   R +     + E  +KIK   S F+ +  G+  A++
Sbjct: 62  AGHHPIALVGGATGLIGDPSGKKAERTLNTQDIVVEWSQKIKNQLSRFLDFEAGENPAVI 121

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
            NN  W+  +  I+ LR++G  F +N ML+ ++V SR+  E  +S+ EF+YMILQ+YDF+
Sbjct: 122 ANNFDWIGKMSIIEFLRDVGKNFGINYMLAKDTVSSRI--ETGISYTEFSYMILQSYDFL 179

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGER--LKTPKLFALTSPLLTTASGTKMGKTLSG 243
            L +  +C+LQ+GGSDQWGNI  G++L  +   +  K F LT PL+T A GTK GKT  G
Sbjct: 180 NLYREKNCKLQIGGSDQWGNITAGLELIRKSEEEGAKAFGLTIPLVTKADGTKFGKTEGG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKI 301
           AIWL+KE TSPY F+Q+W N DD DVV + K  T L   EI+  A+      E  EA+K 
Sbjct: 240 AIWLDKEKTSPYEFYQFWINTDDRDVVKYLKYFTFLSKEEIEAYAEKTETAPEKREAQKR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMG 351
           +A E+T +VHGRE  E+A   +   F  +I            + +P+    + E    + 
Sbjct: 300 LAEEVTVLVHGREALEQAVHISQALFSGNIKELSAQDVKVGFKDVPSFEKDRSE---ELS 356

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           L+ ++V++  + S  +AR  +++ A+ IN    ++    +  +D        L  GKK +
Sbjct: 357 LVDVLVESKLSPSKRQAREDIQNGAVYINGERQTDISHLLTAEDRIEDQFTVLRRGKKKY 416

Query: 412 IIC 414
            + 
Sbjct: 417 FLI 419


>gi|148259739|ref|YP_001233866.1| tyrosyl-tRNA synthetase [Acidiphilium cryptum JF-5]
 gi|326403294|ref|YP_004283375.1| tyrosyl-tRNA synthetase [Acidiphilium multivorum AIU301]
 gi|146401420|gb|ABQ29947.1| tyrosyl-tRNA synthetase [Acidiphilium cryptum JF-5]
 gi|325050155|dbj|BAJ80493.1| tyrosyl-tRNA synthetase [Acidiphilium multivorum AIU301]
          Length = 417

 Score =  513 bits (1322), Expect = e-143,   Method: Composition-based stats.
 Identities = 205/409 (50%), Positives = 280/409 (68%), Gaps = 1/409 (0%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           DFL     RG+I Q ++   L      G +  YIG+D TA SLH GH+ Q+M+L  LQK 
Sbjct: 8   DFLHEAEARGYIFQCTDTEGLREAMRAGPIAGYIGFDCTADSLHVGHMIQIMMLRLLQKH 67

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP++++GGGT+ IGDPSFR+E+R+++  ++I  N+  I+   ++++++G G +DA+M+
Sbjct: 68  GHKPVAILGGGTTRIGDPSFREEARQLLTEEQIALNMAGIRDNIAAYLRFGEGPSDAIMV 127

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL ++ YIDLLRE+G  FSVNRMLSF+SVRSRL+REQ L+FLEFNY ILQAYDF E
Sbjct: 128 NNADWLDTLGYIDLLREVGVHFSVNRMLSFDSVRSRLEREQGLTFLEFNYSILQAYDFRE 187

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + Y   LQMGGSDQWGNI+ GIDL  R    +++ LT+PL+TTASG KMGKT +GA+W
Sbjct: 188 LNRRYGVVLQMGGSDQWGNIVQGIDLVRRTDGKQVYGLTAPLITTASGAKMGKTAAGAVW 247

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           L+    SP+++WQ+WRN +DADV  F +  T LP+ EI R+  LQG EINEAKKI+ATE 
Sbjct: 248 LSAARRSPFDYWQFWRNTEDADVGRFLRLFTDLPLDEIARLEALQGAEINEAKKILATEA 307

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
           T + HGR  AE+AA  A   F+    ++ +P I I   E+  G+    L+VKAG A S  
Sbjct: 308 TALCHGRAVAEEAAETARRTFEGGEAAETLPGIDIPAAELEAGIPAFALLVKAGLAASNG 367

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           EARR ++    ++N++ I++E   I L D    G  KLS GKK+H +  
Sbjct: 368 EARRLIRGGGARLNDAPIADEAHTITLADVI-DGAAKLSAGKKHHRLVR 415


>gi|283833254|ref|ZP_06352995.1| tyrosine--tRNA ligase [Citrobacter youngae ATCC 29220]
 gi|291070890|gb|EFE08999.1| tyrosine--tRNA ligase [Citrobacter youngae ATCC 29220]
          Length = 428

 Score =  513 bits (1322), Expect = e-143,   Method: Composition-based stats.
 Identities = 157/419 (37%), Positives = 234/419 (55%), Gaps = 11/419 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 8   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 67

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++     +QE ++KI+   + F+ +  G   A+ 
Sbjct: 68  AGHKPVALVGGATGLIGDPSFKAAERKLNTEDTVQEWVDKIRKQVAPFLDFDCGDNSAIA 127

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDF 184
            NN  W   +  +  LR+IG  FSVN+M++ E+V+ RL R +Q +SF EF+Y +LQ YDF
Sbjct: 128 ANNYDWFGGMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDQGISFTEFSYNLLQGYDF 187

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K +   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 188 ACLNKLHGVALQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 247

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI   +   K  GK    A+ +
Sbjct: 248 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMDIEEINALEEEDKNSGKAPR-AQYV 306

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTL 355
           +A ++T +VHG E    A       F+ ++        + +    +   E+ +G  L+  
Sbjct: 307 LAEQVTRLVHGEEGLVAAKRITESLFNGNLSDLSEADFEQLAQDGVPMIEMEKGADLMQA 366

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +V +    S  +AR+ + SNA+ IN    S+ +   +  D        L  GKKN+ + 
Sbjct: 367 LVDSELQPSRGQARKTIASNAVTINGEKQSDPEYFFQESDILFGRYTLLRRGKKNYCLI 425


>gi|56421338|ref|YP_148656.1| tyrosyl-tRNA synthetase [Geobacillus kaustophilus HTA426]
 gi|81346651|sp|Q5KW48|SYY_GEOKA RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|56381180|dbj|BAD77088.1| tyrosyl-tRNA synthetase (tyrosine--tRNA ligase) [Geobacillus
           kaustophilus HTA426]
          Length = 419

 Score =  513 bits (1322), Expect = e-143,   Method: Composition-based stats.
 Identities = 154/420 (36%), Positives = 229/420 (54%), Gaps = 11/420 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D L+ L  RG ++Q ++   L  L ++  VT Y G+D TA SLH G+L  ++ L   Q+ 
Sbjct: 2   DLLAELQWRGLVNQTTDEDGLRKLLNEERVTLYCGFDPTADSLHIGNLAAILTLRRFQQA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI+L+GG T +IGDPS +   R +   + ++    +IK     F+ +      A + 
Sbjct: 62  GHRPIALVGGATGLIGDPSGKKSERTLNAKETVEAWSARIKEQLGRFLDFEADGNPAKIK 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W+  +  I  LR++G  FSVN M++ ESV+SR+  E  +SF EF+YM+LQAYDF+ 
Sbjct: 122 NNYDWIGPLDVITFLRDVGKHFSVNYMMAKESVQSRI--ETGISFTEFSYMMLQAYDFLR 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK-LFALTSPLLTTASGTKMGKTLSGAI 245
           L +   CRLQ+GGSDQWGNI  G++L  + K     F LT PL+T A GTK GKT SG I
Sbjct: 180 LYETEGCRLQIGGSDQWGNITAGLELIRKTKGEARAFGLTIPLVTKADGTKFGKTESGTI 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIA 303
           WL+KE TSPY F+Q+W N DD DV+ + K  T L   EI+ + +   +  E   A+K +A
Sbjct: 240 WLDKEKTSPYEFYQFWINTDDRDVIRYLKYFTFLSKEEIEALEQELREAPEKRAAQKALA 299

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVS------RGMGLLTLIV 357
            E+T +VHG E   +A   +   F   I +     I     +V         + L+ L+V
Sbjct: 300 EEVTKLVHGEEALRQAIRISEALFSGDIANLTAAEIEQGFKDVPSFVHEGGDVPLVELLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            AG + S  +AR  ++S AI +N   + +    +  +         +  GKK + +    
Sbjct: 360 SAGISPSKRQAREDIQSGAIYVNGERLQDVGAILTAEHRLEGRFTVIRRGKKKYYLIRYA 419


>gi|311279500|ref|YP_003941731.1| tyrosyl-tRNA synthetase [Enterobacter cloacae SCF1]
 gi|308748695|gb|ADO48447.1| tyrosyl-tRNA synthetase [Enterobacter cloacae SCF1]
          Length = 424

 Score =  513 bits (1322), Expect = e-143,   Method: Composition-based stats.
 Identities = 159/419 (37%), Positives = 234/419 (55%), Gaps = 11/419 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 4   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++     +QE ++KI+   + F+ +  G   A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTEDTVQEWVDKIRKQVAPFLDFDCGDNSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDF 184
            NN  W   +  +  LR+IG  FSVN+M++ E+V+ RL R +Q +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGGMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDQGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K +   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 184 ACLNKLHGVALQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI   +   K  GK    A+ +
Sbjct: 244 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMDIEEINALEEEDKNSGKAPR-AQYV 302

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTL 355
           +A ++T +VHG E    A       F+ ++ S      + +    +   E+ +G  L+  
Sbjct: 303 LADQVTRLVHGEEGLAAAKRITESLFNGTLSSLSEADFEQLAQDGVPMVEMEKGADLMQA 362

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +V +    S  +AR+ + SNAI IN    S+ +      D        L  GKKN+ + 
Sbjct: 363 LVDSELQPSRGQARKTIASNAITINGEKQSDPEYAFVDGDRLYGRYTLLRRGKKNYCLI 421


>gi|261418185|ref|YP_003251867.1| tyrosyl-tRNA synthetase [Geobacillus sp. Y412MC61]
 gi|319767855|ref|YP_004133356.1| tyrosyl-tRNA synthetase [Geobacillus sp. Y412MC52]
 gi|261374642|gb|ACX77385.1| tyrosyl-tRNA synthetase [Geobacillus sp. Y412MC61]
 gi|317112721|gb|ADU95213.1| tyrosyl-tRNA synthetase [Geobacillus sp. Y412MC52]
          Length = 419

 Score =  513 bits (1322), Expect = e-143,   Method: Composition-based stats.
 Identities = 153/420 (36%), Positives = 229/420 (54%), Gaps = 11/420 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D L+ L  RG ++Q ++   L  L  +  VT Y G+D TA SLH G+L  ++ L   Q+ 
Sbjct: 2   DLLAELQWRGLVNQTTDEDGLRELLKEERVTLYCGFDPTADSLHIGNLAAILTLRRFQQA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI+L+GG T +IGDPS +   R +   + ++    +I+   S F+ +      A + 
Sbjct: 62  GHQPIALVGGATGLIGDPSGKKSERTLNAKETVEAWSARIQEQLSRFLDFEADGNPAKIK 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W+  +  I  LR++G  FSVN M++ ESV+SR+  E  +SF EF+YM+LQAYDF+ 
Sbjct: 122 NNYDWIGPLDVITFLRDVGKHFSVNYMMAKESVQSRI--ETGISFTEFSYMMLQAYDFLR 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK-LFALTSPLLTTASGTKMGKTLSGAI 245
           L +   CRLQ+GGSDQWGNI  G++L  + K     F LT PL+T A GTK GKT SG I
Sbjct: 180 LYETEGCRLQIGGSDQWGNITAGLELIRKTKGEARAFGLTIPLVTKADGTKFGKTESGTI 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIA 303
           WL+KE TSPY F+Q+W N DD DV+ + K  T L   EI+ + +   +  E   A+K +A
Sbjct: 240 WLDKEKTSPYEFYQFWINTDDRDVIRYLKYFTFLSKEEIEALEQELREAPEKRAAQKALA 299

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVS------RGMGLLTLIV 357
            E+T +VHG E   +A   +   F   I +     I     +V         + L+ L+V
Sbjct: 300 EEVTKLVHGEEALRQAVRISEALFSGDIGNLTAAEIEQGFKDVPSFVHEGGDVPLVELLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            AG + S  +AR  +++ AI +N   + +    +  +         +  GKK + +    
Sbjct: 360 SAGISPSKRQAREDIQNGAIYVNGERLQDVGAILTAEHRLEGRFTVIRRGKKKYYLIRYA 419


>gi|153810790|ref|ZP_01963458.1| hypothetical protein RUMOBE_01174 [Ruminococcus obeum ATCC 29174]
 gi|149833186|gb|EDM88268.1| hypothetical protein RUMOBE_01174 [Ruminococcus obeum ATCC 29174]
          Length = 409

 Score =  513 bits (1322), Expect = e-143,   Method: Composition-based stats.
 Identities = 175/410 (42%), Positives = 254/410 (61%), Gaps = 7/410 (1%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG I Q+++  E+  + + G  T YIG+D TA SLH GH   L L+  LQ  G
Sbjct: 3   VWEELKARGLIAQVTDEDEIKEMVNNGKATFYIGFDPTADSLHVGHFMALCLMKRLQMAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           ++PI+L+GGGT +IGDPS R + R+MM  + IQ NI+  K   S FI +  GK  ALM+N
Sbjct: 63  NRPIALLGGGTGMIGDPSGRTDMRQMMTKETIQHNIDCFKKQMSRFIDFSDGK--ALMVN 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL ++ Y+DLLR++G+ FSVNRML+ E  + R++R   LSFLEFNYMI+Q+YDF  L
Sbjct: 121 NADWLLNLNYVDLLRDVGAHFSVNRMLTAECYKQRMER--GLSFLEFNYMIMQSYDFYML 178

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            + Y C +Q GG DQW N++ G +L  R      +A+T  LL  + G KMGKT SGA+WL
Sbjct: 179 YQKYGCNMQFGGDDQWSNMLGGTELIRRKLGKDAYAMTITLLLNSEGKKMGKTQSGAVWL 238

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           +   TSP++F+QYWRN+DDADV+   + LT LP+ +ID MA  +G ++N+AK+I+A E+T
Sbjct: 239 DPNKTSPFDFYQYWRNVDDADVIKCMRLLTFLPLEQIDEMATWEGSQLNKAKEILAYELT 298

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV--SRGMGLLTLIVKAGFATST 365
            +VHG EEA+KA   A   F     + HMPT  ++ ++      + L+T+++KAG   + 
Sbjct: 299 NLVHGEEEAKKAQEGARALFSGGADTAHMPTTELTDEDFVEEGTIDLITMLIKAGLVPTR 358

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +E RR ++   + I+   I++ K  +        G + L  GKK     +
Sbjct: 359 SEGRRAIEQGGVSIDGEKITDIKHTVSKDTLTGDG-VVLKRGKKKFNRVY 407


>gi|134284884|gb|ABO69544.1| TyrS [Magnetospirillum gryphiswaldense MSR-1]
          Length = 416

 Score =  513 bits (1322), Expect = e-143,   Method: Composition-based stats.
 Identities = 208/415 (50%), Positives = 286/415 (68%), Gaps = 1/415 (0%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M   +S+FL +++ERG++HQ ++   LD   +QG   AYIG+D TA SLH G L Q+MLL
Sbjct: 1   MTTARSEFLRVVAERGYMHQCTDLEALDKRLNQGPAAAYIGFDCTAESLHVGGLMQIMLL 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            W QKTG+KPI LMGGGT+ IGDP+ +DE+R+M+    I  N+  IK +F+ ++ +G G 
Sbjct: 61  RWWQKTGNKPIVLMGGGTTRIGDPTGKDEARKMLDDAAIARNMAGIKQVFAKYLTFGDGA 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           TDA+M+NN  WL  + YI  LR+ G  F++NRML+F+SV+ RL+REQ L+FLEFNYMILQ
Sbjct: 121 TDAMMVNNADWLDQLNYISFLRDYGKHFTINRMLTFDSVKLRLEREQPLTFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
            YDF EL   + C LQMGGSDQWGNII G++LG R+   +LF LTSPLLTT+SG KMGKT
Sbjct: 181 GYDFAELWSRHKCVLQMGGSDQWGNIINGVELGRRVHQAELFGLTSPLLTTSSGAKMGKT 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           + GA+WLN +M S + FWQYWRN +DADV  F K  T LP+ EI R+  LQG EINEAKK
Sbjct: 241 VGGAVWLNADMLSAWEFWQYWRNTEDADVGRFLKLYTELPLDEIARLEALQGAEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+A E+T + HG + A +AA  A + F+    + ++PTI+I   +++ G+    L V+AG
Sbjct: 301 ILANEVTRLCHGEDAAREAAETARKTFEEGALADNLPTIAIPAADLNAGIPAFALFVRAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            +TS  EARR L+    ++N++ +++    I   D    G IKL+ GKK +++  
Sbjct: 361 LSTSNGEARRLLQQGGGRVNDAQVTDPAAPIGA-DALKDGVIKLTAGKKRNVLVK 414


>gi|257875423|ref|ZP_05655076.1| tyrosyl-tRNA synthetase [Enterococcus casseliflavus EC20]
 gi|257809589|gb|EEV38409.1| tyrosyl-tRNA synthetase [Enterococcus casseliflavus EC20]
          Length = 420

 Score =  513 bits (1321), Expect = e-143,   Method: Composition-based stats.
 Identities = 155/418 (37%), Positives = 233/418 (55%), Gaps = 11/418 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +DF   L +RG +HQ ++   L    ++  V  YIG+D TA SLH GHL  +++L   Q+
Sbjct: 3   TDFFEELKQRGLVHQTTDEAALTKQLNEESVKLYIGFDPTADSLHIGHLLPILMLRRFQQ 62

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH PI+L+GGGT +IGDPSF+D+ R++     + E  + IK   S FI +   +  A++
Sbjct: 63  NGHVPIALVGGGTGMIGDPSFKDQERQLNTLDTVLEWSQSIKSQLSRFIDFDDQENPAII 122

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
            NN  WL  +K ID LR+ G  F++N M+S ESV+ R+  E  +S+ EF Y +LQAYDF+
Sbjct: 123 ANNYEWLGELKLIDFLRDTGKNFTINYMMSKESVKRRI--ETGISYTEFAYQLLQAYDFL 180

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L  N+ C LQ+GGSDQWGNI  GI+L  R +  + F LT PL+T A GTK GKT   A+
Sbjct: 181 NLYDNHGCLLQLGGSDQWGNITSGIELLRREREVQGFGLTMPLITKADGTKFGKTEGNAV 240

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIA 303
           WL+ + T+PY F+Q+W N DD D V F K  T L + EI  +            A+K +A
Sbjct: 241 WLDAKKTTPYEFYQFWINTDDRDAVKFLKYFTFLSLEEIAAIEAEFNAAPESRAAQKALA 300

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS-----ISKDEV--SRGMGLLTLI 356
            E+TT+VHG E  E+A   +   F  +I   +   I      +   +V     + ++ ++
Sbjct: 301 KEVTTLVHGAEAYEQAVRISASLFSGNIKELNAEEIEQGFKGVPSHQVTADDSLNIVEVL 360

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
             A    S  +AR  +++ AI IN   + +   +++  D      + +  GKK + + 
Sbjct: 361 TTAKIEPSKRQAREDVQNGAIYINGERVQDLTYELQASDRIGGKYVVIRRGKKKYFLL 418


>gi|157145898|ref|YP_001453217.1| tyrosyl-tRNA synthetase [Citrobacter koseri ATCC BAA-895]
 gi|189083646|sp|A8AH18|SYY_CITK8 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|157083103|gb|ABV12781.1| hypothetical protein CKO_01649 [Citrobacter koseri ATCC BAA-895]
          Length = 428

 Score =  513 bits (1321), Expect = e-143,   Method: Composition-based stats.
 Identities = 157/419 (37%), Positives = 235/419 (56%), Gaps = 11/419 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 8   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 67

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++     +QE ++KI+   + F+ +  G   A+ 
Sbjct: 68  AGHKPVALVGGATGLIGDPSFKAAERKLNTEDTVQEWVDKIRKQVAPFLDFDCGDNSAIA 127

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDF 184
            NN  W   +  +  LR+IG  FSVN+M++ E+V+ RL R +Q +SF EF+Y +LQ YDF
Sbjct: 128 ANNYDWFGGMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDQGISFTEFSYNLLQGYDF 187

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K +   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 188 ACLNKLHGVTLQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 247

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + ++EI   +   K  GK    A+ +
Sbjct: 248 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMDIAEINALEEEDKNSGKAPR-AQYV 306

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTL 355
           +A ++T +VHG E    A       F+ ++        + +    +   E+ +G  L+  
Sbjct: 307 LAEQVTRLVHGEEGLVAAKRITESLFNGNLSDLSEADFEQLAQDGVPMIEMEKGADLMQA 366

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +V +    S  +AR+ + SNA+ IN    S+ +   +  D        L  GKKN+ + 
Sbjct: 367 LVDSELQPSRGQARKTIASNAVTINGEKQSDPEYFFQDSDILFGRYTLLRRGKKNYCLI 425


>gi|154687107|ref|YP_001422268.1| tyrosyl-tRNA synthetase [Bacillus amyloliquefaciens FZB42]
 gi|189083641|sp|A7Z7R1|SYY_BACA2 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|154352958|gb|ABS75037.1| TyrS [Bacillus amyloliquefaciens FZB42]
          Length = 421

 Score =  512 bits (1320), Expect = e-143,   Method: Composition-based stats.
 Identities = 155/423 (36%), Positives = 238/423 (56%), Gaps = 19/423 (4%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           ++ L  LS RG I Q+++   L+   ++  +  Y G+D TA SLH GHL  ++ L   Q 
Sbjct: 2   TNLLEDLSFRGLIQQMTDEEGLNKQLNEEKIRLYSGFDPTADSLHIGHLLPILTLRRFQL 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH PI+L+GG T +IGDPS +   R +     + E  +KIK   S F+ +  G+  A++
Sbjct: 62  AGHHPIALVGGATGLIGDPSGKKAERTLNTQDIVVEWSQKIKNQLSRFLDFEAGENPAVI 121

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
            NN  W+  +  I+ LR++G  F +N ML+ ++V SR+  E  +S+ EF+YMILQ+YDF+
Sbjct: 122 ANNFDWIGKLSIIEFLRDVGKNFGINYMLAKDTVSSRI--ETGISYTEFSYMILQSYDFL 179

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGER--LKTPKLFALTSPLLTTASGTKMGKTLSG 243
            L +  +C+LQ+GGSDQWGNI  G++L  +   +  K F LT PL+T A GTK GKT  G
Sbjct: 180 NLYREKNCKLQIGGSDQWGNITAGLELIRKSEEEGAKAFGLTIPLVTKADGTKFGKTEGG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKI 301
           AIWL+KE TSPY F+Q+W N DD DVV + K  T L   EI+  A+      E  EA+K 
Sbjct: 240 AIWLDKEKTSPYEFYQFWINTDDRDVVKYLKYFTFLSKEEIEAYAEKTETAPEKREAQKR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMG 351
           +A E+T +VHGRE  E+A   +   F  +I            + +P+    + E    + 
Sbjct: 300 LAEEVTVLVHGREALEQAVHISQALFSGNIKELSAQDVKVGFKDVPSFEKDRSE---ELS 356

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           L+ ++V++  + S  +AR  +++ A+ IN    ++    +  +D        L  GKK +
Sbjct: 357 LVDVLVESKLSPSKRQAREDIQNGAVYINGERQTDIGHLLTAEDRIEDQFTVLRRGKKKY 416

Query: 412 IIC 414
            + 
Sbjct: 417 FLI 419


>gi|83942545|ref|ZP_00955006.1| tyrosyl-tRNA synthetase [Sulfitobacter sp. EE-36]
 gi|83846638|gb|EAP84514.1| tyrosyl-tRNA synthetase [Sulfitobacter sp. EE-36]
          Length = 416

 Score =  512 bits (1320), Expect = e-143,   Method: Composition-based stats.
 Identities = 211/412 (51%), Positives = 280/412 (67%), Gaps = 2/412 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KSDF+ I+ ERGF+   ++ + LD     G V AYIGYD TA SLH GHL  +M+L WLQ
Sbjct: 6   KSDFIRIMMERGFLADCTDYQGLDDALMNGAVPAYIGYDATAKSLHVGHLMNIMVLRWLQ 65

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           K G KPI+LMGGGT+ +GDPSFR + R ++ +  I  NI  ++ +F  ++ YG G +DA+
Sbjct: 66  KCGGKPITLMGGGTTKVGDPSFRSDERPLLDNAAIDANIAGMQQVFEKYLSYGDGASDAI 125

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           MLNN  WL ++ Y+  LR+IG  FSVNRMLSFESV+SRL REQSLSFLEFNYMILQAYDF
Sbjct: 126 MLNNAEWLDNLNYLAFLRDIGRHFSVNRMLSFESVKSRLDREQSLSFLEFNYMILQAYDF 185

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL + Y C LQMGGSDQWGNI+ GIDL  R+   ++F LT+PLLTT+ G KMGK+  GA
Sbjct: 186 LELNRRYGCLLQMGGSDQWGNIVNGIDLTRRVLDQEIFGLTTPLLTTSDGRKMGKSQGGA 245

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           IWLN +M SPY FWQ+WRN  DAD   F K  T LP+ E DR+  L+G +IN AK I+A 
Sbjct: 246 IWLNGDMLSPYEFWQFWRNTTDADTGKFLKIFTELPVEECDRLGALKGSDINAAKIILAN 305

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E+TT++HG E A+ A   A E F+       +PT+++S +++  G+ ++ LIVK+G A S
Sbjct: 306 EVTTLLHGAEAAKNAEATAREVFEKGGVGDDLPTLTLSAEDIGDGISIVQLIVKSGLAGS 365

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             EA+R +  N  + N+  +++  L +      +   IKLS GKK H +  L
Sbjct: 366 GKEAKRLITENGARYNDEPLTDAGLMVDADTLATP--IKLSAGKKRHALVQL 415


>gi|237731399|ref|ZP_04561880.1| tyrosyl-tRNA synthetase [Citrobacter sp. 30_2]
 gi|226906938|gb|EEH92856.1| tyrosyl-tRNA synthetase [Citrobacter sp. 30_2]
          Length = 428

 Score =  512 bits (1320), Expect = e-143,   Method: Composition-based stats.
 Identities = 157/419 (37%), Positives = 234/419 (55%), Gaps = 11/419 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 8   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 67

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++     +QE ++KI+   + F+ +  G   A+ 
Sbjct: 68  AGHKPVALVGGATGLIGDPSFKAAERKLNTEDTVQEWVDKIRKQVAPFLDFDCGDNSAIA 127

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDF 184
            NN  W   +  +  LR+IG  FSVN+M++ E+V+ RL R +Q +SF EF+Y +LQ YDF
Sbjct: 128 ANNYDWFGGMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDQGISFTEFSYNLLQGYDF 187

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K +   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 188 ACLNKLHGVALQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 247

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI   +   K  GK    A+ +
Sbjct: 248 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMDIEEINALEEEDKNSGKAPR-AQYV 306

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTL 355
           +A ++T +VHG E    A       F+ ++        + +    +   E+ +G  L+  
Sbjct: 307 LAEQVTRLVHGEEGLVAAKRITESLFNGNLSDLSEADFEQLAQDGVPMIEMDKGADLMQA 366

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +V +    S  +AR+ + SNA+ IN    S+ +   +  D        L  GKKN+ + 
Sbjct: 367 LVDSELQPSRGQARKTIASNAVTINGEKQSDPEYFFQDSDILFGRYTLLRRGKKNYCLI 425


>gi|212638313|ref|YP_002314833.1| tyrosyl-tRNA synthetase [Anoxybacillus flavithermus WK1]
 gi|212559793|gb|ACJ32848.1| Tyrosyl-tRNA synthetase [Anoxybacillus flavithermus WK1]
          Length = 429

 Score =  512 bits (1320), Expect = e-143,   Method: Composition-based stats.
 Identities = 157/424 (37%), Positives = 235/424 (55%), Gaps = 11/424 (2%)

Query: 3   AFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
             + D L  L  RG I+Q+++   L  L ++  V  Y G+D TA SLH GHL  +++L  
Sbjct: 8   VVEMDLLRDLQFRGLINQMTDEDGLKALLAEESVKVYCGFDPTADSLHIGHLLPILMLRR 67

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD 122
            Q+ GH+PI+L+GG T +IGDPS +   R++   + +    E+IK   S F+ +      
Sbjct: 68  FQRAGHQPIALVGGATGLIGDPSGKKAERKLNEKETVAYYSERIKQQLSRFLDFEKVDNP 127

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
           A++ NN  W+ S+  I  LR++G  F +N ML+ ESV+SRL  E  +SF EF+YMILQAY
Sbjct: 128 AIIANNYEWIGSLDVITFLRDVGKNFGINYMLAKESVQSRL--ETGISFTEFSYMILQAY 185

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL-KTPKLFALTSPLLTTASGTKMGKTL 241
           DF++L + Y C+LQ+GGSDQWGNI  G++L  +  +  K+F LT PL+T A GTK GKT 
Sbjct: 186 DFLKLYEMYGCKLQVGGSDQWGNITAGLELIRKTEEDAKVFGLTVPLVTKADGTKFGKTE 245

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAK 299
            GA+WL+ + TSPY F+Q+W N DD DVV + K  T L   EI  + +   +  E   A+
Sbjct: 246 GGAVWLDADKTSPYEFYQFWINTDDRDVVKYLKYFTFLSHEEIIELERQTAEAPEKRAAQ 305

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV------SRGMGLL 353
           K +A E+T +VHG E  ++A   +   F   +       I     +V       + M L+
Sbjct: 306 KALAAEMTRLVHGEEALQQAINISEALFSGDVAKLTADEIEQGFKDVPSYVCDEKEMALV 365

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            L+V +G   S  +AR  + + AI IN   + +    +  +D        +  GKK + +
Sbjct: 366 DLLVASGICPSKRQAREDVTNGAIYINGERVQDVNKMMTEEDRMEGRFTIIRRGKKKYYL 425

Query: 414 CHLC 417
               
Sbjct: 426 IRYA 429


>gi|18309634|ref|NP_561568.1| tyrosyl-tRNA synthetase [Clostridium perfringens str. 13]
 gi|168212096|ref|ZP_02637721.1| tyrosyl-tRNA synthetase [Clostridium perfringens B str. ATCC 3626]
 gi|168217233|ref|ZP_02642858.1| tyrosyl-tRNA synthetase [Clostridium perfringens NCTC 8239]
 gi|81767835|sp|Q8XMN6|SYY_CLOPE RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|18144311|dbj|BAB80358.1| tyrosine-tRNA ligase [Clostridium perfringens str. 13]
 gi|170709993|gb|EDT22175.1| tyrosyl-tRNA synthetase [Clostridium perfringens B str. ATCC 3626]
 gi|182380693|gb|EDT78172.1| tyrosyl-tRNA synthetase [Clostridium perfringens NCTC 8239]
          Length = 406

 Score =  512 bits (1320), Expect = e-143,   Method: Composition-based stats.
 Identities = 178/406 (43%), Positives = 260/406 (64%), Gaps = 7/406 (1%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           ++ L  L ERG+I Q ++  E   L  +  VT YIG+D TA SLH GH   +M +  +QK
Sbjct: 2   ANVLDTLMERGYIKQFTHEAETRELLEKEKVTFYIGFDPTADSLHVGHFIAMMFMAHMQK 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+PI+L+GGGT+ IGDPS + + R+MM ++ I  N+  IK     FI +   K  A++
Sbjct: 62  AGHRPIALIGGGTATIGDPSGKTDMRKMMTNETIAHNVACIKKQMEKFIDFSDDK--AIL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  WL +  Y++ LRE+G  FSVNRMLS E  + RL+R   LSFLEFNYM++Q YDF 
Sbjct: 120 VNNADWLLNQNYVEFLREVGVHFSVNRMLSAECFKQRLER--GLSFLEFNYMLMQGYDFY 177

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L K Y+C++++GG DQW N+I G++L  +      +A+T  LLT + G KMGKT++GA+
Sbjct: 178 VLNKKYNCKMELGGDDQWSNMIAGVELVRKKSQESAYAMTCTLLTNSEGQKMGKTVNGAL 237

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
           WL+ E TSPY F+QYWRN++DADV    K LT +PM E+ R++ L+G +INEAKK++A E
Sbjct: 238 WLDPEKTSPYEFYQYWRNVNDADVEKCLKLLTFIPMDEVRRLSSLEGSQINEAKKVLAFE 297

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           +T +VHG EEA KA  AA   F       ++PT  + KD++  G  LL ++V+A    S 
Sbjct: 298 VTKLVHGEEEATKAQQAAEALFGKGGDMSNVPTYEMGKDKL--GAELLDILVEAEIVPSK 355

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
            E +R +K   + +N   +++ K  ++  DF+  G + +  GKKN+
Sbjct: 356 AEGKRLVKQGGLSLNGEKVADFKKTLEEADFE-NGEVLIKRGKKNY 400


>gi|318078324|ref|ZP_07985656.1| tyrosyl-tRNA synthetase [Streptomyces sp. SA3_actF]
          Length = 438

 Score =  512 bits (1320), Expect = e-143,   Method: Composition-based stats.
 Identities = 146/422 (34%), Positives = 234/422 (55%), Gaps = 11/422 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +D +  L  RG   Q ++   L    + G VT Y G+D TA+SLH GHL Q++ +  LQ+
Sbjct: 18  TDIVDDLKWRGLFAQSTDEEALRKALANGPVTFYCGFDPTAASLHVGHLVQVLTVRRLQQ 77

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+P++L+GG T  IGDP      R +     I E + +++     F+ +  G + A M
Sbjct: 78  AGHRPLALVGGATGQIGDPRP-TAERTLNDPATIAEWVNRLRAQIEPFLDF-DGPSAARM 135

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  W   +  I  LR+IG  F VN+ML+ ESV  RL+ EQ +S+ EF+Y +LQA DF+
Sbjct: 136 VNNLDWTSGLSAIAFLRDIGKHFRVNKMLTKESVARRLESEQGISYTEFSYQLLQAMDFL 195

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASGTKMGKTLSGA 244
           EL + + C LQ GGSDQWGN+  G+DL  R++   ++ AL +PL+T A GTK GK+ SGA
Sbjct: 196 ELYRRHGCVLQQGGSDQWGNLTAGVDLIHRVEPEAQVHALATPLMTKADGTKFGKSESGA 255

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKII 302
           +WL+  MT+PY F+Q+W N+DD D+  + + L+  P +E++ +     +  +   A++ +
Sbjct: 256 VWLDPAMTTPYAFYQFWLNVDDRDISRYTRILSFRPRAELEELEAVTAERPQARTAQRAL 315

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQ-HMPTI-----SISKDEVSRGMGLLTLI 356
           A E+TT+VHG  +      A+   F     ++    T+      + +  V+    ++ L+
Sbjct: 316 AEELTTLVHGEAQTRAVVAASRALFGQGELAELDEATLAAALGELPRASVAEPASVVDLL 375

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V+ G   S + ARR +K     +NN+ ++ E       +   +  + L  GKKN     +
Sbjct: 376 VETGLVASKSAARRTIKEGGAYVNNAKVTAEDAVPAASELLHSRWLVLRRGKKNLAAVEV 435

Query: 417 CG 418
            G
Sbjct: 436 TG 437


>gi|295399545|ref|ZP_06809527.1| tyrosyl-tRNA synthetase [Geobacillus thermoglucosidasius C56-YS93]
 gi|294979011|gb|EFG54607.1| tyrosyl-tRNA synthetase [Geobacillus thermoglucosidasius C56-YS93]
          Length = 419

 Score =  512 bits (1320), Expect = e-143,   Method: Composition-based stats.
 Identities = 156/422 (36%), Positives = 232/422 (54%), Gaps = 19/422 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D L  L  RG I+Q+++   L  L ++  VT Y G+D TA SLH GHL  ++ L   Q  
Sbjct: 2   DLLQELEWRGLINQVTDKEGLQKLLNEEKVTLYSGFDPTADSLHIGHLLPILTLRRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI+L+GG T +IGDPS +   R +   + +Q+   +IK   + F+ +   +  A + 
Sbjct: 62  GHRPIALVGGATGLIGDPSGKKSERTLNPKETVQQWSNRIKEQLARFLDFDAEENPAKIA 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W+ S+  I  LR++G  F +N ML+ ESV+SR+  E  +SF EF+YMILQ+ DF++
Sbjct: 122 NNYDWIGSLDVISFLRDVGKHFGINYMLAKESVQSRI--ETGISFTEFSYMILQSLDFLK 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKT-PKLFALTSPLLTTASGTKMGKTLSGAI 245
           L +   CRLQ+GGSDQWGNI  G++L  + +   K F LT PL+T A GTK GKT  GA+
Sbjct: 180 LYQTEQCRLQIGGSDQWGNITAGLELIRKTEGDAKAFGLTVPLVTKADGTKFGKTEGGAV 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIA 303
           WL+KE TSPY F+Q+W N DD DV+ + K  T L   EI+ + K   K      A+K +A
Sbjct: 240 WLDKEKTSPYEFYQFWINTDDRDVIKYLKYFTFLSKEEIEELEKQLQKAPEQRAAQKALA 299

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLL 353
            E+T +VHG +  ++A   +   F  S+            + +P+     +EV     L+
Sbjct: 300 EEMTKLVHGEDALKQAVRISEALFSGSVSQLTAEEIEQGFKDVPSFEYEGEEV----PLV 355

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            L+V A    S  +AR  + + AI IN   + +    I   +        +  GKK + +
Sbjct: 356 ELLVMAKIVPSKRQAREDIANGAIYINGERMQDVNAVITKANRIEGRFTIIRRGKKKYYL 415

Query: 414 CH 415
             
Sbjct: 416 IR 417


>gi|238796382|ref|ZP_04639891.1| Tyrosyl-tRNA synthetase [Yersinia mollaretii ATCC 43969]
 gi|238719827|gb|EEQ11634.1| Tyrosyl-tRNA synthetase [Yersinia mollaretii ATCC 43969]
          Length = 428

 Score =  512 bits (1320), Expect = e-143,   Method: Composition-based stats.
 Identities = 159/424 (37%), Positives = 230/424 (54%), Gaps = 21/424 (4%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG ++ Y G+D TA SLH GHL  L+ L   Q 
Sbjct: 8   SNLIKQLQERGLVAQVTDEDALAERLAQGPISLYCGFDPTADSLHLGHLVPLLCLKRFQL 67

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+P++L+GG T +IGDPSF+   R++     + E +EKI+   S F+ +  G+  A+ 
Sbjct: 68  AGHRPVALVGGATGMIGDPSFKASERKLNTEDTVNEWVEKIRRQVSPFLDFDCGENSAIA 127

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYDF 184
            NN  W   +  +  LR+IG  FSVN+M++ E+V+ RL R+   +SF EF+Y +LQAYDF
Sbjct: 128 ANNYDWFGGMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDSGISFTEFSYNLLQAYDF 187

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K +   LQ+GGSDQWGNI  GIDL  RL   +++ LT PL+T A GTK GKT  GA
Sbjct: 188 ACLNKAHGVALQIGGSDQWGNITSGIDLTRRLHQQQVYGLTVPLITKADGTKFGKTEGGA 247

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI   +   K  GK    A+ +
Sbjct: 248 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSLEEINALEEEDKNSGKAPR-AQYV 306

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS-----------QHMPTISISKDEVSRGM 350
           +A  +T MVHG E    A       F   ++              MPTI +++D      
Sbjct: 307 LAENVTGMVHGAEGLAAAKRITDSLFSGDLNEMTEADFAQLAQDGMPTIELTRD-----A 361

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            L   +V A    S  +AR  + SNA+ IN    ++ +      D        L  GKK+
Sbjct: 362 DLQQALVNAELVPSRGQARTMINSNAVAINGEKQADPEYVFTDADRLFGRYTLLRRGKKH 421

Query: 411 HIIC 414
           + + 
Sbjct: 422 YCLI 425


>gi|257865795|ref|ZP_05645448.1| tyrosyl-tRNA synthetase [Enterococcus casseliflavus EC30]
 gi|257872130|ref|ZP_05651783.1| tyrosyl-tRNA synthetase [Enterococcus casseliflavus EC10]
 gi|257799729|gb|EEV28781.1| tyrosyl-tRNA synthetase [Enterococcus casseliflavus EC30]
 gi|257806294|gb|EEV35116.1| tyrosyl-tRNA synthetase [Enterococcus casseliflavus EC10]
          Length = 420

 Score =  512 bits (1319), Expect = e-143,   Method: Composition-based stats.
 Identities = 155/418 (37%), Positives = 233/418 (55%), Gaps = 11/418 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +DF   L +RG +HQ ++   L    ++  V  YIG+D TA SLH GHL  +++L   Q+
Sbjct: 3   TDFFEELKQRGLVHQTTDEAALTKQLNEESVKLYIGFDPTADSLHIGHLLPILMLRRFQQ 62

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH PI+L+GGGT +IGDPSF+D+ R++     + E  + IK   S FI +   +  A++
Sbjct: 63  NGHVPIALVGGGTGMIGDPSFKDQERQLNTLDTVLEWSQSIKSQLSRFIDFDDQENPAII 122

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
            NN  WL  +K ID LR+ G  F++N M+S ESV+ R+  E  +S+ EF Y +LQAYDF+
Sbjct: 123 ANNYEWLGELKLIDFLRDTGKNFTINYMMSKESVKRRI--ETGISYTEFAYQLLQAYDFL 180

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L  N+ C LQ+GGSDQWGNI  GI+L  R +  + F LT PL+T A GTK GKT   A+
Sbjct: 181 NLYDNHGCLLQLGGSDQWGNITSGIELLRREREVQGFGLTMPLITKADGTKFGKTEGNAV 240

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIA 303
           WL+ + T+PY F+Q+W N DD D V F K  T L + EI  +            A+K +A
Sbjct: 241 WLDAKKTTPYEFYQFWINTDDRDAVKFLKYFTFLSLEEIAAIEAEFNAAPESRAAQKALA 300

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS-----ISKDEV--SRGMGLLTLI 356
            E+TT+VHG E  E+A   +   F  +I   +   I      +   +V     + ++ ++
Sbjct: 301 KEVTTLVHGAEAYEQALRISASLFSGNIKELNAEEIEQGFKGVPSHQVTADDSLNIVEVL 360

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
             A    S  +AR  +++ AI IN   + +   +++  D      + +  GKK + + 
Sbjct: 361 TTAKIEPSKRQAREDVQNGAIYINGERVQDLTYELQASDRIGGKYVVIRRGKKKYFLL 418


>gi|158425243|ref|YP_001526535.1| tyrosyl-tRNA synthetase [Azorhizobium caulinodans ORS 571]
 gi|158332132|dbj|BAF89617.1| tyrosyl-tRNA synthetase [Azorhizobium caulinodans ORS 571]
          Length = 437

 Score =  512 bits (1319), Expect = e-143,   Method: Composition-based stats.
 Identities = 221/435 (50%), Positives = 293/435 (67%), Gaps = 20/435 (4%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M   +SDFL  L ERG+IHQ S+   LD   S+G +TAYIG+D TASSLHAGHL  +M+L
Sbjct: 1   MTTLRSDFLRTLQERGYIHQCSDLERLDAKASEGPITAYIGFDATASSLHAGHLLSIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             LQ+TGH+PI+LMGGGT+ IGDPS +DE+R+M+   +I ENI  I+ +F+ F+ +    
Sbjct: 61  RTLQRTGHRPIALMGGGTTKIGDPSGKDEARKMLTDAQINENIASIRKVFARFLDFEGSP 120

Query: 121 T--------------------DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
                                 A+M NN  WL  +KYI LLRE+G  F++NRML+F+SV+
Sbjct: 121 KGYARFARAVDGKWNEEPRLLPAIMENNANWLDELKYIPLLREVGPHFTINRMLTFDSVK 180

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            RL+REQ L+FLEFNYMILQAYDFVEL K + C LQMGGSDQWGNI+ G++LG R+    
Sbjct: 181 LRLEREQPLTFLEFNYMILQAYDFVELNKRHGCTLQMGGSDQWGNIVNGMELGRRMHGAD 240

Query: 221 LFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLP 280
           LFALT+PLLTT+SG KMGKT  GA+WL+  + SPY +WQYWRN  DADV  F K  T LP
Sbjct: 241 LFALTTPLLTTSSGAKMGKTAGGAVWLDAALLSPYEYWQYWRNTGDADVERFLKLFTELP 300

Query: 281 MSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS 340
           + EI R+A L G+EIN AK ++ATE T ++HGR  AE+A   A   F+    S ++PTI 
Sbjct: 301 LDEIARLAALGGQEINHAKDVLATEATALLHGRAAAEEAKATARATFEEGALSTNLPTIE 360

Query: 341 ISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG 400
           I   ++  G+   +  V AG   ST+EARR +KS  +K+N++ +++EKL +  +D  + G
Sbjct: 361 IPAADLKAGLAANSAFVTAGLVPSTSEARRQIKSGGLKVNDATVTDEKLVLGERDLTAEG 420

Query: 401 NIKLSFGKKNHIICH 415
            IKLS GKK H++  
Sbjct: 421 VIKLSMGKKKHVLVR 435


>gi|238782597|ref|ZP_04626628.1| Tyrosyl-tRNA synthetase [Yersinia bercovieri ATCC 43970]
 gi|238716524|gb|EEQ08505.1| Tyrosyl-tRNA synthetase [Yersinia bercovieri ATCC 43970]
          Length = 428

 Score =  512 bits (1319), Expect = e-143,   Method: Composition-based stats.
 Identities = 159/424 (37%), Positives = 230/424 (54%), Gaps = 21/424 (4%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG ++ Y G+D TA SLH GHL  L+ L   Q 
Sbjct: 8   SNLIKQLQERGLVAQVTDEEALAERLAQGPISLYCGFDPTADSLHLGHLVPLLCLKRFQL 67

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+P++L+GG T +IGDPSF+   R++     + E +EKI+   S F+ +  G+  A+ 
Sbjct: 68  AGHRPVALVGGATGMIGDPSFKASERKLNTEDTVNEWVEKIRRQVSPFLDFDCGENSAIA 127

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYDF 184
            NN  W   +  +  LR+IG  FSVN+M++ E+V+ RL R+   +SF EF+Y +LQAYDF
Sbjct: 128 ANNYDWFGGMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDSGISFTEFSYNLLQAYDF 187

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K +   LQ+GGSDQWGNI  GIDL  RL   +++ LT PL+T A GTK GKT  GA
Sbjct: 188 ACLNKAHGVALQIGGSDQWGNITSGIDLTRRLHQQQVYGLTVPLITKADGTKFGKTEGGA 247

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI   +   K  GK    A+ +
Sbjct: 248 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSLEEINALEEEDKNSGKAPR-AQYV 306

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS-----------QHMPTISISKDEVSRGM 350
           +A  +T MVHG E    A       F   ++              MPTI +++D      
Sbjct: 307 LAENVTAMVHGAEGLAAAKRITDSLFSGDLNEMTQADFAQLAQDGMPTIELTRD-----A 361

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            L   +V A    S  +AR  + SNA+ IN    ++ +      D        L  GKK+
Sbjct: 362 DLQQALVNAELVPSRGQARTMINSNAVAINGEKQADPEYLFTDADRLFGRYTLLRRGKKH 421

Query: 411 HIIC 414
           + + 
Sbjct: 422 YCLI 425


>gi|255526011|ref|ZP_05392935.1| tyrosyl-tRNA synthetase [Clostridium carboxidivorans P7]
 gi|296184759|ref|ZP_06853170.1| tyrosyl-tRNA synthetase [Clostridium carboxidivorans P7]
 gi|255510271|gb|EET86587.1| tyrosyl-tRNA synthetase [Clostridium carboxidivorans P7]
 gi|296050541|gb|EFG89964.1| tyrosyl-tRNA synthetase [Clostridium carboxidivorans P7]
          Length = 406

 Score =  512 bits (1319), Expect = e-143,   Method: Composition-based stats.
 Identities = 185/406 (45%), Positives = 265/406 (65%), Gaps = 7/406 (1%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           ++    L ERG+I Q+++  E+  L  +  VT YIG+D TA SLH GH  Q+M++  +Q+
Sbjct: 2   ANVYDTLMERGYIKQVTHEEEVRDLLGKEKVTFYIGFDPTADSLHVGHFLQMMVMAHMQR 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+PI+L+GGGT+++GDPS + + R+M+  ++IQ N E  K  FS  + +   K  A+M
Sbjct: 62  AGHRPIALLGGGTAMVGDPSGKTDMRKMLTKEQIQHNAECFKNQFSVLVDFDNDK--AIM 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
            NN  WL ++ Y+D LRE+G  FSVNRML+ E  + RL  E+ LSFLEFNYM++Q YDF+
Sbjct: 120 ANNADWLLNLNYVDFLREVGVHFSVNRMLTAECFKQRL--EKGLSFLEFNYMLMQGYDFL 177

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           EL + Y C LQ+GG DQW NII G DL  R ++   + +T  LLT + G KMGKT  GA+
Sbjct: 178 ELNRRYGCVLQLGGDDQWSNIIAGADLIRRKESKPAYGMTFALLTNSEGKKMGKTEKGAL 237

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
           WLNKE TSPY F+QYWRN+ D+DV      LT LPM E+ R+  LQ  EINEAKK++A E
Sbjct: 238 WLNKEKTSPYEFYQYWRNVADSDVEKCLALLTFLPMDEVRRLGLLQDAEINEAKKVLAYE 297

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           +T +VHG+EEAEKA  AA   F      +++PT+ I++DE+  G  ++ LIV      S 
Sbjct: 298 VTKIVHGKEEAEKAKAAAEALFAGGASMENVPTVEITEDEL--GCTVIDLIVNTKILPSK 355

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           +EARR ++   + IN+  I++  + I   +F +  ++ +  GKKN+
Sbjct: 356 SEARRLVQQGGLTINDEKITDANMVITKANF-NDKSMLIRRGKKNY 400


>gi|312109900|ref|YP_003988216.1| tyrosyl-tRNA synthetase [Geobacillus sp. Y4.1MC1]
 gi|311215001|gb|ADP73605.1| tyrosyl-tRNA synthetase [Geobacillus sp. Y4.1MC1]
          Length = 419

 Score =  512 bits (1319), Expect = e-143,   Method: Composition-based stats.
 Identities = 156/422 (36%), Positives = 232/422 (54%), Gaps = 19/422 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D L  L  RG I+Q+++   L  L ++  VT Y G+D TA SLH GHL  ++ L   Q  
Sbjct: 2   DLLQELEWRGLINQVTDKEGLQKLLNEEKVTLYSGFDPTADSLHIGHLLPILTLRRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI+L+GG T +IGDPS +   R +   + +Q+   +IK   + F+ +   +  A + 
Sbjct: 62  GHRPIALVGGATGLIGDPSGKKSERTLNPKETVQQWSNRIKEQLARFLDFDAEENPAKIA 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W+ S+  I  LR++G  F +N ML+ ESV+SR+  E  +SF EF+YMILQ+ DF++
Sbjct: 122 NNYDWIGSLDVISFLRDVGKHFGINYMLAKESVQSRI--ETGISFTEFSYMILQSLDFLK 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKT-PKLFALTSPLLTTASGTKMGKTLSGAI 245
           L +   CRLQ+GGSDQWGNI  G++L  + +   K F LT PL+T A GTK GKT  GA+
Sbjct: 180 LYQTEQCRLQIGGSDQWGNITAGLELIRKTEGDAKAFGLTVPLVTKADGTKFGKTEGGAV 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIA 303
           WL+KE TSPY F+Q+W N DD DV+ + K  T L   EI+ + K   K      A+K +A
Sbjct: 240 WLDKEKTSPYEFYQFWINTDDRDVIKYLKYFTFLSKEEIEELEKQLQKTPEQRAAQKALA 299

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLL 353
            E+T +VHG +  ++A   +   F  S+            + +P+     +EV     L+
Sbjct: 300 EEMTKLVHGEDALKQAVRISEALFSGSVSQLTAEEIEQGFKDVPSFEYEGEEV----PLV 355

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            L+V A    S  +AR  + + AI IN   + +    I   +        +  GKK + +
Sbjct: 356 ELLVMAKIVPSKRQAREDIANGAIYINGERMQDVNAVITKANRIEGRFTIIRRGKKKYYL 415

Query: 414 CH 415
             
Sbjct: 416 IR 417


>gi|317132187|ref|YP_004091501.1| tyrosyl-tRNA synthetase [Ethanoligenens harbinense YUAN-3]
 gi|315470166|gb|ADU26770.1| tyrosyl-tRNA synthetase [Ethanoligenens harbinense YUAN-3]
          Length = 408

 Score =  512 bits (1319), Expect = e-143,   Method: Composition-based stats.
 Identities = 167/411 (40%), Positives = 258/411 (62%), Gaps = 7/411 (1%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
                L+ RG I Q ++  ++  L + G VT YIG+D TA SLH GH  Q++++  +Q+ 
Sbjct: 2   GVYEELTARGLIAQTTDEEKVRELVNGGPVTFYIGFDPTADSLHVGHFLQMVIMAHMQRA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+P++++GGGT ++GDP+ R + R+M+  + I+ NI + K     FI +  GK  ALM+
Sbjct: 62  GHRPVAVLGGGTGMVGDPTGRTDMRQMLTPEAIRHNIAQFKKQMERFIDFSDGK--ALMV 119

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL S+ Y+D LRE+G  FS+NRML+FE  ++R++R   LSFLEFNYM++Q+YDF  
Sbjct: 120 NNADWLLSLNYVDFLREVGVHFSINRMLTFECFKTRMER--GLSFLEFNYMLMQSYDFYR 177

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L  +Y C+++ GG DQW NII G++L  +      + +T  LLTT+ G KMGKT  GA+W
Sbjct: 178 LFTDYGCKIEFGGDDQWANIIGGVELIRKKTGNDAYGMTFQLLTTSDGKKMGKTQGGAVW 237

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           L+ E TSPY+F+QYWRN++D++V+   K +T +P+ EI+  + L+G E+N AK+ +A E+
Sbjct: 238 LDPEKTSPYDFYQYWRNVEDSNVIRLLKMITFVPLDEIETFSDLEGSELNRAKERLAYEV 297

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATST 365
           T  VHG+EEA+KA  A    F     + +MP  ++S+ +   G + +L L+V+ G A S 
Sbjct: 298 TKQVHGKEEADKAQEATHALFGTGGSNANMPATALSESDFHDGQITILELLVRCGLAPSR 357

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            EARR ++   + +N+  I++        DF +     +  GKK      L
Sbjct: 358 GEARRLIEQGGVSVNDRKITSFSQTFAPADFQTD--YIVRKGKKVFHKVTL 406


>gi|168264629|ref|ZP_02686602.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
 gi|205346947|gb|EDZ33578.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
          Length = 424

 Score =  512 bits (1319), Expect = e-143,   Method: Composition-based stats.
 Identities = 159/419 (37%), Positives = 235/419 (56%), Gaps = 11/419 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 4   SNLIKQLQERGLVAQVTDEDALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +QE + KI+   + F+ +  G+  A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVAKIRKQVAPFLDFDCGENSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDF 184
            NN  W  S+  +  LR+IG  FSVN+M++ E+V+ RL R +Q +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGSMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDQGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K +   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 184 ACLNKLHGVALQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKI 301
           +WL+ + TS Y F+Q+W N  DADV  F K  T + + EI   +   K  GK    A+ +
Sbjct: 244 VWLDPKKTSLYKFYQFWINTADADVYRFLKFFTFMDIEEINALEEEDKNSGKAPR-AQYV 302

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTL 355
           +A ++T +VHG E    A       F  S+ +      + +    +   E+ +G  L+  
Sbjct: 303 LAEQVTRLVHGEEGLVAAKRITECLFSGSLSALSEADFEQLAQDGVPMVEMEKGADLMQA 362

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +V A    S  +AR+ + SNA+ IN    S+ +     +D        L  GKKN+ + 
Sbjct: 363 LVDAELQPSRGQARKTIASNAVTINGEKQSDPEYIFNDEDRLFGRYTLLRRGKKNYCLI 421


>gi|240145172|ref|ZP_04743773.1| tyrosine--tRNA ligase [Roseburia intestinalis L1-82]
 gi|257202852|gb|EEV01137.1| tyrosine--tRNA ligase [Roseburia intestinalis L1-82]
 gi|291537628|emb|CBL10740.1| tyrosyl-tRNA synthetase [Roseburia intestinalis M50/1]
 gi|291537764|emb|CBL10875.1| tyrosyl-tRNA synthetase [Roseburia intestinalis XB6B4]
          Length = 408

 Score =  512 bits (1318), Expect = e-143,   Method: Composition-based stats.
 Identities = 177/410 (43%), Positives = 255/410 (62%), Gaps = 6/410 (1%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG I Q+++  E+  L + G  T YIG+D TA SLH GH   L L+  LQ  G
Sbjct: 3   LYDELVARGLIAQVTDEAEIKDLINNGKATFYIGFDPTADSLHVGHFMALCLMKRLQMAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           +KPI+L+GGGT++IGDPS R + R+MM  + IQ N +  K   S FI +  GK  ALM+N
Sbjct: 63  NKPIALIGGGTAMIGDPSGRTDMRQMMTPETIQHNCDCFKKQMSRFIDFSDGK--ALMVN 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  + YID+LRE+G+ FSVNRML+ E  + R+  E+ LSFLEFNYMI+Q+YDF  L
Sbjct: 121 NADWLMDLNYIDVLREVGAHFSVNRMLTAECYKQRM--EKGLSFLEFNYMIMQSYDFYTL 178

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            + Y C ++ GG DQW N++ G +L  R      +A+T  LL  + G KMGKT SGA+WL
Sbjct: 179 YQKYGCNMEFGGDDQWSNMLGGTELIRRKLGKDAYAMTINLLLNSEGKKMGKTQSGAVWL 238

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           +   TSP++F+QYWRN+ DADV+   + LT LP+ EID M   +G ++N+AK+I+A E+T
Sbjct: 239 DPNKTSPFDFFQYWRNVSDADVLKCIRMLTFLPLEEIDAMESWEGAQLNQAKEILAFELT 298

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTN 366
            +VHG EEA KA  A+   F     S HMPT+ ++  + + G + +L L+VKA  A S +
Sbjct: 299 KLVHGEEEANKAKEASHALFAGGGDSAHMPTLELTAADFADGDLDILALLVKAELAPSRS 358

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +ARR ++   + + +  +++ +       F + G + +  GKK  +   L
Sbjct: 359 DARRAVQQGGVSVADEKVTDIQTTYGADAFGADG-LVVKRGKKKFVKIVL 407


>gi|291617328|ref|YP_003520070.1| TyrS [Pantoea ananatis LMG 20103]
 gi|291152358|gb|ADD76942.1| TyrS [Pantoea ananatis LMG 20103]
 gi|327393773|dbj|BAK11195.1| tyrosyl-tRNA synthetase TyrS [Pantoea ananatis AJ13355]
          Length = 438

 Score =  512 bits (1318), Expect = e-143,   Method: Composition-based stats.
 Identities = 160/425 (37%), Positives = 235/425 (55%), Gaps = 21/425 (4%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG I Q+++   L    +QG ++ Y G+D TA SLH GHL  L+ L   Q 
Sbjct: 18  SNLIQQLQERGLIAQVTDEDALVEKLAQGPISLYCGFDPTADSLHLGHLVPLLCLKRFQD 77

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++  S+ + E +EKI+   + F+ +  G   A+ 
Sbjct: 78  AGHKPVALVGGATGLIGDPSFKAAERKLNTSETVGEWVEKIRTQVAPFLDFDCGANSAIA 137

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDF 184
            NN  W  ++  +  LR+IG  FSVN+M++ E+V+ RL R +Q +SF EF+Y +LQ YDF
Sbjct: 138 ANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDQGISFTEFSYNLLQGYDF 197

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L   +   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  GA
Sbjct: 198 ACLNALHGVSLQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKSDGTKFGKTEGGA 257

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T L + EI   +   K  G     A+ +
Sbjct: 258 VWLDAKKTSPYKFYQFWINTADADVYRFLKFFTFLSIEEIHALEEEDKNSGTAPR-AQYV 316

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS-----------QHMPTISISKDEVSRGM 350
           +A ++T +VHG E    A       F  ++               MPTI++S ++     
Sbjct: 317 LAEQVTRLVHGEEGLAAAKRITESLFSGALSDMTEADFEQLAQDGMPTITLSAED----- 371

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            L   +VKA    S  +AR  + SNA+ +N    S+ + +    D        L  GKK+
Sbjct: 372 DLQQALVKAELVPSRGQARTMIGSNAVSLNGEKQSDAEYRFSDSDKLFNRFTLLRRGKKH 431

Query: 411 HIICH 415
           + + +
Sbjct: 432 YCLIN 436


>gi|318605833|emb|CBY27331.1| tyrosyl-tRNA synthetase; cluster 1 [Yersinia enterocolitica subsp.
           palearctica Y11]
          Length = 424

 Score =  512 bits (1318), Expect = e-143,   Method: Composition-based stats.
 Identities = 160/424 (37%), Positives = 230/424 (54%), Gaps = 21/424 (4%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG ++ Y G+D TA SLH GHL  L+ L   Q 
Sbjct: 4   SNLIKQLQERGLVAQVTDEDALAERLAQGPISLYCGFDPTADSLHLGHLVPLLCLKRFQL 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+P++L+GG T +IGDPSF+   R++     + E +EKI+   S F+ +  G+  A+ 
Sbjct: 64  AGHRPVALVGGATGMIGDPSFKASERKLNTEDMVNEWVEKIRRQVSPFLDFDCGENSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYDF 184
            NN  W   +  +  LR+IG  FSVN+M++ E+V+ RL R+   +SF EF+Y +LQAYDF
Sbjct: 124 ANNYDWFGGMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDSGISFTEFSYNLLQAYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K +   LQ+GGSDQWGNI  GIDL  RL   +++ LT PL+T A GTK GKT  GA
Sbjct: 184 ACLNKAHGVALQIGGSDQWGNITSGIDLTRRLHQQQVYGLTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI   +   K  GK    A+ +
Sbjct: 244 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSLEEINALEEEDKNSGKAPR-AQYV 302

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS-----------QHMPTISISKDEVSRGM 350
           +A  +T MVHG E    A       F   ++              MPTI +++D      
Sbjct: 303 LAENVTGMVHGEEGLAAAKRITASLFSGDLNDMTEADFAQLAQDGMPTIELTRD-----A 357

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            L   +V A    S  +AR  + SNA+ IN    S+ +      D        L  GKK+
Sbjct: 358 DLQQALVNAELVPSRGQARTMISSNAVAINGEKQSDPEYAFTDADRLFGRYTLLRRGKKH 417

Query: 411 HIIC 414
           + + 
Sbjct: 418 YCLI 421


>gi|307131416|ref|YP_003883432.1| tyrosyl-tRNA synthetase [Dickeya dadantii 3937]
 gi|306528945|gb|ADM98875.1| tyrosyl-tRNA synthetase [Dickeya dadantii 3937]
          Length = 424

 Score =  512 bits (1318), Expect = e-143,   Method: Composition-based stats.
 Identities = 158/419 (37%), Positives = 228/419 (54%), Gaps = 11/419 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q 
Sbjct: 3   SNLIQQLQERGLVAQVTDEGALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQM 62

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++     +QE +EKI+   + F+ +  G   A+ 
Sbjct: 63  AGHKPVALVGGATGLIGDPSFKAAERKLNTEDTVQEWVEKIRRQAAPFLDFDCGDNSAVA 122

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYDF 184
            NN  W  S+  +  LR+IG  FSVN+M++ E+V+ RL R+   +SF EF+Y +LQ YDF
Sbjct: 123 ANNYDWFGSMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDVGISFTEFSYNLLQGYDF 182

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L   +   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT SGA
Sbjct: 183 ASLNALHGVELQIGGSDQWGNITSGIDLTRRLHQKQVFGLTVPLITKSDGTKFGKTESGA 242

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T L +  I   +   K  G     A+ +
Sbjct: 243 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFLDIETINALEEEDKNSGAAPR-AQYV 301

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTL 355
           +A E+T +VHG E    A       F+ ++          +    +   E++ G  L   
Sbjct: 302 LAEEVTRLVHGEEGLTAAKRITQSLFNGNLSDLTEADFAQLAQDGVPMVELATGADLQQA 361

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +V +    S  +AR+ + SNAI IN    S+ +      D        L  GKKN+ + 
Sbjct: 362 LVDSELQPSRGQARKTIASNAITINGEKQSDPEYTFTGADRLFGRYTLLRRGKKNYCLV 420


>gi|168204711|ref|ZP_02630716.1| tyrosyl-tRNA synthetase [Clostridium perfringens E str. JGS1987]
 gi|168213835|ref|ZP_02639460.1| tyrosyl-tRNA synthetase [Clostridium perfringens CPE str. F4969]
 gi|182627169|ref|ZP_02954880.1| tyrosyl-tRNA synthetase [Clostridium perfringens D str. JGS1721]
 gi|170663716|gb|EDT16399.1| tyrosyl-tRNA synthetase [Clostridium perfringens E str. JGS1987]
 gi|170714657|gb|EDT26839.1| tyrosyl-tRNA synthetase [Clostridium perfringens CPE str. F4969]
 gi|177907440|gb|EDT70118.1| tyrosyl-tRNA synthetase [Clostridium perfringens D str. JGS1721]
          Length = 406

 Score =  512 bits (1318), Expect = e-143,   Method: Composition-based stats.
 Identities = 178/406 (43%), Positives = 260/406 (64%), Gaps = 7/406 (1%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           ++ L  L ERG+I Q ++  E   L  +  VT YIG+D TA SLH GH   +M +  +QK
Sbjct: 2   ANVLDTLMERGYIKQFTHEAETRELLEKEKVTFYIGFDPTADSLHVGHFIAMMFMAHMQK 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+PI+L+GGGT+ IGDPS + + R+MM ++ I  N+  IK     FI +   K  A++
Sbjct: 62  AGHRPIALIGGGTATIGDPSGKTDMRKMMTNETIAHNVACIKKQMEKFIDFSDDK--AIL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  WL +  Y++ LRE+G  FSVNRMLS E  + RL+R   LSFLEFNYM++Q YDF 
Sbjct: 120 VNNADWLLNQNYVEFLREVGVHFSVNRMLSAECFKQRLER--GLSFLEFNYMLMQGYDFY 177

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L K Y+C++++GG DQW N+I G++L  +      +A+T  LLT + G KMGKT++GA+
Sbjct: 178 VLNKKYNCKMELGGDDQWSNMIAGVELVRKKSQESAYAMTCTLLTNSEGQKMGKTVNGAL 237

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
           WL+ E TSPY F+QYWRN++DADV    K LT +PM E+ R++ L+G +INEAKK++A E
Sbjct: 238 WLDPEKTSPYEFYQYWRNVNDADVEKCLKLLTFIPMDEVRRLSSLEGSQINEAKKVLAFE 297

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           +T +VHG EEA KA  AA   F       ++PT  + KD++  G  LL ++V+A    S 
Sbjct: 298 VTKLVHGEEEATKAQQAAEALFGKGGDMSNVPTYEMGKDKL--GSELLDILVEAEIVPSK 355

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
            E +R +K   + +N   +++ K  ++  DF+  G + +  GKKN+
Sbjct: 356 AEGKRLVKQGGLSLNGEKVADFKKTLEEADFE-NGEVLIKRGKKNY 400


>gi|218531163|ref|YP_002421979.1| tyrosyl-tRNA synthetase [Methylobacterium chloromethanicum CM4]
 gi|218523466|gb|ACK84051.1| tyrosyl-tRNA synthetase [Methylobacterium chloromethanicum CM4]
          Length = 423

 Score =  512 bits (1318), Expect = e-143,   Method: Composition-based stats.
 Identities = 219/415 (52%), Positives = 298/415 (71%), Gaps = 2/415 (0%)

Query: 3   AFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
           A KSDF+ +L ERG+IHQ S+   +D L ++G +T Y GYD TA+SLH GHL  +M+L W
Sbjct: 7   APKSDFIRVLQERGYIHQASDLAGIDALAAEGGLTTYTGYDCTAASLHVGHLLSIMMLHW 66

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD 122
           LQKTG KP+ LMGGGT+ +GDPS RDE+R+++  ++I+ N E IK  FS F+ +G G   
Sbjct: 67  LQKTGGKPVVLMGGGTTRVGDPSGRDETRKILTLEQIEANKEGIKQTFSRFLSFGEGGNG 126

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
           A+M++N  WL  + YI++LR+IG  FSVNRM+S +SVR RL+R+Q LSFLEFNYMILQ+Y
Sbjct: 127 AVMVDNAEWLTKLNYIEMLRDIGRHFSVNRMMSMDSVRMRLERDQELSFLEFNYMILQSY 186

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DFVEL + +  RLQMGGSDQWGNI+ GIDLG R+ TP+L+ALT PLLTT+SG KMGKT +
Sbjct: 187 DFVELNRRFGTRLQMGGSDQWGNIVNGIDLGRRMGTPQLYALTCPLLTTSSGAKMGKTAA 246

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKII 302
           GA+WL+  M SPY++WQ+WRN +DADV  F K  T LP+ EI+R+A LQG EINEAK ++
Sbjct: 247 GAVWLDAGMLSPYDYWQFWRNTEDADVGRFLKLFTLLPLPEIERLAALQGAEINEAKTVL 306

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLI--VKAG 360
           ATE T ++HG + A  AA  A + F     +Q +PTI +    +  G+G+LT      A 
Sbjct: 307 ATEATALMHGPDAAAAAAETARKTFVEGTLAQSLPTIPVPPAVLEAGLGVLTAFGPDYAK 366

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
              ST+EARR +K   +++N+  +S+EK  ++ +D  + G IKLSFG+K H++  
Sbjct: 367 LVPSTSEARRQIKGGGLRVNDVQVSDEKAVLRKEDLTAEGVIKLSFGRKKHVLLR 421


>gi|123442400|ref|YP_001006379.1| tyrosyl-tRNA synthetase [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|189029781|sp|A1JNV3|SYY_YERE8 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|122089361|emb|CAL12209.1| tyrosyl-tRNA synthetase [Yersinia enterocolitica subsp.
           enterocolitica 8081]
          Length = 424

 Score =  512 bits (1318), Expect = e-143,   Method: Composition-based stats.
 Identities = 160/424 (37%), Positives = 229/424 (54%), Gaps = 21/424 (4%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG ++ Y G+D TA SLH GHL  L+ L   Q 
Sbjct: 4   SNLIKQLQERGLVAQVTDEDALAERLAQGPISLYCGFDPTADSLHLGHLVPLLCLKRFQL 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+P++L+GG T +IGDPSF+   R++     + E +EKI+   S F+ +  G   A+ 
Sbjct: 64  AGHRPVALVGGATGMIGDPSFKASERKLNTEDTVNEWVEKIRRQVSPFLDFDCGDNSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYDF 184
            NN  W   +  +  LR+IG  FSVN+M++ E+V+ RL R+   +SF EF+Y +LQAYDF
Sbjct: 124 ANNYDWFGGMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDSGISFTEFSYNLLQAYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K +   LQ+GGSDQWGNI  GIDL  RL   +++ LT PL+T A GTK GKT  GA
Sbjct: 184 ACLNKAHGVALQIGGSDQWGNITSGIDLTRRLHQQQVYGLTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI   +   K  GK    A+ +
Sbjct: 244 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMNLEEINALEEEDKNSGKAPR-AQYV 302

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS-----------QHMPTISISKDEVSRGM 350
           +A  +T MVHG E    A       F   ++              MPTI +++D      
Sbjct: 303 LAENVTGMVHGEEGLAAAKRITASLFSGDLNDMTEADFAQLAQDGMPTIELTRD-----A 357

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            L   +V A    S  +AR  + SNA+ IN    S+ +      D        L  GKK+
Sbjct: 358 DLQQALVNAELVPSRGQARTMISSNAVAINGEKQSDPEYAFTDADRLFGRYTLLRRGKKH 417

Query: 411 HIIC 414
           + + 
Sbjct: 418 YCLI 421


>gi|238792277|ref|ZP_04635912.1| Tyrosyl-tRNA synthetase [Yersinia intermedia ATCC 29909]
 gi|238728514|gb|EEQ20033.1| Tyrosyl-tRNA synthetase [Yersinia intermedia ATCC 29909]
          Length = 428

 Score =  512 bits (1318), Expect = e-143,   Method: Composition-based stats.
 Identities = 161/424 (37%), Positives = 230/424 (54%), Gaps = 21/424 (4%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG ++ Y G+D TA SLH GHL  L+ L   Q 
Sbjct: 8   SNLIKQLQERGLVAQVTDEDALAERLAQGPISLYCGFDPTADSLHLGHLVPLLCLKRFQL 67

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+P++L+GG T +IGDPSF+   R++     + E +EKI+   S F+ +  G+  A+ 
Sbjct: 68  AGHRPVALVGGATGMIGDPSFKASERKLNTEDTVNEWVEKIRRQVSPFLDFDCGENSAIA 127

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYDF 184
            NN  W   +  +  LR+IG  FSVN+M++ E+V+ RL R+   +SF EF+Y +LQAYDF
Sbjct: 128 ANNYDWFGGMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDSGISFTEFSYNLLQAYDF 187

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K +   LQ+GGSDQWGNI  GIDL  RL   +++ LT PL+T A GTK GKT  GA
Sbjct: 188 ACLNKAHGVALQIGGSDQWGNITSGIDLTRRLHQQQVYGLTVPLITKADGTKFGKTEGGA 247

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + M EI   +   K  GK    A+ +
Sbjct: 248 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSMEEINALEDEDKNSGKAPR-AQYV 306

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS-----------QHMPTISISKDEVSRGM 350
           +A  +T MVHG E    A       F   ++              MPTI +S+D      
Sbjct: 307 LAENVTGMVHGAEGLAAAKRITASLFSGDLNEMTEADFAQLAQDGMPTIELSRD-----A 361

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            L   +V A    S  +AR  + SNA+ IN    ++ +      D        L  GKK+
Sbjct: 362 DLQQALVNAELVPSRGQARTMIGSNAVAINGEKQADPEYTFTDADRLFGRYTLLRRGKKH 421

Query: 411 HIIC 414
           + + 
Sbjct: 422 YCLI 425


>gi|238762512|ref|ZP_04623482.1| Tyrosyl-tRNA synthetase [Yersinia kristensenii ATCC 33638]
 gi|238699157|gb|EEP91904.1| Tyrosyl-tRNA synthetase [Yersinia kristensenii ATCC 33638]
          Length = 428

 Score =  512 bits (1318), Expect = e-143,   Method: Composition-based stats.
 Identities = 160/424 (37%), Positives = 231/424 (54%), Gaps = 21/424 (4%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG ++ Y G+D TA SLH GHL  L+ L   Q 
Sbjct: 8   SNLIKQLQERGLVAQVTDENALAERLAQGPISLYCGFDPTADSLHLGHLVPLLCLKRFQL 67

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+P++L+GG T +IGDPSF+   R++     + E +EKI+   S F+ +  G+  A+ 
Sbjct: 68  AGHRPVALVGGATGMIGDPSFKASERKLNTEDTVNEWVEKIRRQVSPFLDFNCGENSAIA 127

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYDF 184
            NN  W   +  +  LR+IG  FSVN+M++ E+V+ RL R+   +SF EF+Y +LQAYDF
Sbjct: 128 ANNYDWFGGMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDSGISFTEFSYNLLQAYDF 187

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K +   LQ+GGSDQWGNI  GIDL  RL   +++ LT PL+T A GTK GKT  GA
Sbjct: 188 ACLNKAHGVALQIGGSDQWGNITSGIDLTRRLHQQQVYGLTVPLITKADGTKFGKTEGGA 247

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + ++EI   +   K  GK    A+ +
Sbjct: 248 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSLAEINALEEEDKNSGKAPR-AQYV 306

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMS-----------IHSQHMPTISISKDEVSRGM 350
           +A  +T MVHG E    A       F              +    MPTI +++D      
Sbjct: 307 LAENVTGMVHGEEGLAAAKRITASLFSGDLNQMTEADFAQLAQDGMPTIELTRD-----A 361

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            L   +V A    S  +AR  + SNA+ IN   +S+ +      D        L  GKK+
Sbjct: 362 DLQQALVNAELVPSRGQARTMISSNAVAINGEKLSDPEYIFTDADRLFGRYTLLRRGKKH 421

Query: 411 HIIC 414
           + + 
Sbjct: 422 YCLI 425


>gi|322833470|ref|YP_004213497.1| tyrosyl-tRNA synthetase [Rahnella sp. Y9602]
 gi|321168671|gb|ADW74370.1| tyrosyl-tRNA synthetase [Rahnella sp. Y9602]
          Length = 424

 Score =  511 bits (1317), Expect = e-143,   Method: Composition-based stats.
 Identities = 161/419 (38%), Positives = 230/419 (54%), Gaps = 11/419 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG I Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q 
Sbjct: 4   SNLIKQLQERGLIAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQL 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++  ++ + E +EKI+   S F+ +  G+  A+ 
Sbjct: 64  NGHKPVALVGGATGLIGDPSFKATERKLNTNETVNEWVEKIRQQVSPFLDFSCGENSAIT 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYDF 184
            NN  W  S+  +  LR+IG  FSVN+M++ E+V+ RL R+   +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGSMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDSGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L   +   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  GA
Sbjct: 184 ASLYDLHKVELQIGGSDQWGNITSGIDLTRRLHQKQVFGLTVPLITKSDGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + +I   +   K  GK    A+ +
Sbjct: 244 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEDINALEEEDKTSGKAPR-AQYV 302

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTL 355
           +A E+T MVHG E    A       F  S+          +    +   EV R   L   
Sbjct: 303 LAEEVTGMVHGAEGLAAAKRITQSLFSGSLSEMTEVDFGQLAQDGLELFEVPRDTDLQQA 362

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +V AG A S  +AR  + SNA+ +N    ++ +      D        L  GKKN+ + 
Sbjct: 363 LVIAGMAPSKGQARTMISSNAVSVNGEKQTDTEYSFADSDRLFGRYTLLRRGKKNYTLL 421


>gi|254562151|ref|YP_003069246.1| tyrosine tRNA synthetase [Methylobacterium extorquens DM4]
 gi|254269429|emb|CAX25395.1| tyrosine tRNA synthetase [Methylobacterium extorquens DM4]
          Length = 423

 Score =  511 bits (1317), Expect = e-143,   Method: Composition-based stats.
 Identities = 218/415 (52%), Positives = 297/415 (71%), Gaps = 2/415 (0%)

Query: 3   AFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
           A KSDF+ +L ERG+IHQ S+   +D L ++G +T Y GYD TA+SLH GHL  +M+L W
Sbjct: 7   APKSDFIRVLQERGYIHQASDLAGIDALAAEGGLTTYTGYDCTAASLHVGHLLSIMMLHW 66

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD 122
           LQKTG KP+ LMGGGT+ +GDPS RDE+R+++  ++I+ N E IK  FS F+ +G     
Sbjct: 67  LQKTGGKPVVLMGGGTTRVGDPSGRDETRKILTLEQIEANKEGIKQTFSRFLSFGESGNG 126

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
           A+M++N  WL  + YI++LR+IG  FSVNRM+S +SVR RL+R+Q LSFLEFNYMILQ+Y
Sbjct: 127 AVMVDNAEWLTKLNYIEMLRDIGRHFSVNRMMSMDSVRMRLERDQELSFLEFNYMILQSY 186

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DFVEL + +  RLQMGGSDQWGNI+ GIDLG R+ TP+L+ALT PLLTT+SG KMGKT +
Sbjct: 187 DFVELNRRFGTRLQMGGSDQWGNIVNGIDLGRRMGTPQLYALTCPLLTTSSGAKMGKTAA 246

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKII 302
           GA+WL+  M SPY++WQ+WRN +DADV  F K  T LP+ EI+R+A LQG EINEAK ++
Sbjct: 247 GAVWLDAGMLSPYDYWQFWRNTEDADVGRFLKLFTLLPLPEIERLAALQGAEINEAKTVL 306

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLI--VKAG 360
           ATE T ++HG + A  AA  A + F     +Q +PTI +    +  G+G+LT      A 
Sbjct: 307 ATEATALMHGPDAAAAAAETARKTFVEGTLAQSLPTIPVPPAVLEAGLGVLTAFGPDYAK 366

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
              ST+EARR +K   +++N+  +S+EK  ++ +D  + G IKLSFG+K H++  
Sbjct: 367 LVPSTSEARRQIKGGGLRVNDVQVSDEKAVLRTEDLTAEGVIKLSFGRKKHVLLR 421


>gi|308186734|ref|YP_003930865.1| Tyrosyl-tRNA synthetase [Pantoea vagans C9-1]
 gi|308057244|gb|ADO09416.1| Tyrosyl-tRNA synthetase [Pantoea vagans C9-1]
          Length = 424

 Score =  511 bits (1317), Expect = e-143,   Method: Composition-based stats.
 Identities = 160/425 (37%), Positives = 232/425 (54%), Gaps = 21/425 (4%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG I Q+++   L    +QG ++ Y G+D TA SLH GHL  L+ L   Q 
Sbjct: 4   SNLIQQLQERGLIAQVTDEDALTEKLAQGPISLYCGFDPTADSLHLGHLVPLLCLKRFQD 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+P++L+GG T +IGDPSF+   R++  S  + E +EKI+   + F+ +  G   A+ 
Sbjct: 64  AGHQPVALVGGATGLIGDPSFKAAERKLNTSDTVNEWVEKIRQQVAPFLDFDCGSNSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDF 184
            NN  W  S+  +  LR+IG  FSVN+M++ E+V+ RL R +Q +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGSMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDQGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L + +   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  GA
Sbjct: 184 ACLNERHGVSLQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKSDGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T L + EI   +   K  G     A+ +
Sbjct: 244 VWLDAKKTSPYKFYQFWINTADADVYRFLKFFTFLSIEEISALEEEDKNSGTAPR-AQYV 302

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS-----------QHMPTISISKDEVSRGM 350
           +A ++T +VHG      A       F  S+               MPTI +  D+     
Sbjct: 303 LAEQVTRLVHGEAGLSAAKRITASLFSGSVSDMTEADFEQLAQDGMPTIVLGADD----- 357

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            L   +VKA    S  +AR  + SNA+ +N    S+ + +    D        L  GKK+
Sbjct: 358 DLQQALVKAELVPSRGQARTMIGSNAVSLNGEKQSDAEYRFSDSDKLFNRFTLLRRGKKH 417

Query: 411 HIICH 415
           + + +
Sbjct: 418 YCLIN 422


>gi|110800207|ref|YP_695086.1| tyrosyl-tRNA synthetase [Clostridium perfringens ATCC 13124]
 gi|123148935|sp|Q0TTF4|SYY_CLOP1 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|110674854|gb|ABG83841.1| tyrosyl-tRNA synthetase [Clostridium perfringens ATCC 13124]
          Length = 406

 Score =  511 bits (1316), Expect = e-143,   Method: Composition-based stats.
 Identities = 178/406 (43%), Positives = 260/406 (64%), Gaps = 7/406 (1%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           ++ L  L ERG+I Q ++  E   L  +  VT YIG+D TA SLH GH   +M +  +QK
Sbjct: 2   ANVLDTLMERGYIKQFTHEAETRELLEKEKVTFYIGFDPTADSLHVGHFIAMMFMAHMQK 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+PI+L+GGGT+ IGDPS + + R+MM ++ I  N+  IK     FI +   K  A++
Sbjct: 62  AGHRPIALIGGGTATIGDPSGKTDMRKMMTNETIAHNVACIKKQMEKFIDFSDDK--AIL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  WL +  Y++ LRE+G  FSVNRMLS E  + RL+R   LSFLEFNYM++Q YDF 
Sbjct: 120 VNNADWLLNQNYVEFLREVGVHFSVNRMLSAECFKQRLER--GLSFLEFNYMLMQGYDFY 177

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L K Y+C++++GG DQW N+I G++L  +      +A+T  LLT + G KMGKT++GA+
Sbjct: 178 VLNKKYNCKMELGGDDQWSNMIAGVELVRKKSQESAYAMTCTLLTNSEGQKMGKTVNGAL 237

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
           WL+ E TSPY F+QYWRN++DADV    K LT +PM E+ R++ L+G +INEAKK++A E
Sbjct: 238 WLDPEKTSPYEFYQYWRNVNDADVEKCLKLLTFIPMDEVRRLSSLEGSQINEAKKVLAFE 297

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           +T +VHG EEA KA  AA   F       ++PT  + KD++  G  LL ++V+A    S 
Sbjct: 298 VTKLVHGEEEATKAKQAAEALFGKGGDMSNVPTYEMGKDKL--GSELLDILVEAEIVPSK 355

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
            E +R +K   + +N   +++ K  ++  DF+  G + +  GKKN+
Sbjct: 356 AEGKRLVKQGGLSLNGEKVADFKKTLEEADFE-NGEVLIKRGKKNY 400


>gi|304317642|ref|YP_003852787.1| tyrosyl-tRNA synthetase [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302779144|gb|ADL69703.1| tyrosyl-tRNA synthetase [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 405

 Score =  511 bits (1316), Expect = e-143,   Method: Composition-based stats.
 Identities = 179/404 (44%), Positives = 257/404 (63%), Gaps = 7/404 (1%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
              +L ER FI Q+++  E+  L  +  VT YIG+D TA SLH GH  QLM++  +Q+ G
Sbjct: 3   VFDVLKERNFIQQMTHEDEIKGLLEKEKVTFYIGFDPTADSLHVGHFLQLMVMAHMQRAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+PI L+GGGT+++GDP+ + + R+M+  +EI  N E  K   S FI +  GK  A++ N
Sbjct: 63  HRPIVLIGGGTAMVGDPTGKTDMRKMLTKEEISHNAEAFKKQMSRFIDFSDGK--AILAN 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL ++ Y++ LR+IG  FSVN+ML+ E  ++RL+R   LSFLEFNYM++QAYDF+ L
Sbjct: 121 NADWLLNLNYVEFLRDIGVHFSVNKMLTAECFKTRLER--GLSFLEFNYMLMQAYDFLML 178

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            K Y C L+MGG DQW NI+ G+DL  R +  + + +T  LLTT+ G KMGKT  GAIWL
Sbjct: 179 NKEYGCVLEMGGDDQWSNILAGVDLVRRKEGKQAYGMTFTLLTTSEGKKMGKTEKGAIWL 238

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           + E T PY+F+QYWRNIDD+DV      LT LPM E+ R+  L+ KEINEAKK++A E+T
Sbjct: 239 DAEKTPPYDFYQYWRNIDDSDVEKCLSLLTFLPMDEVRRLGSLKDKEINEAKKVLAYEVT 298

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
            +VHG +EA KA  AA   F+ S    ++PT  I+ D +  G  LL ++ K     S +E
Sbjct: 299 KLVHGEDEARKAQKAAEALFEGSGDLSNVPTSIITHDML--GSSLLDVLTKTNIIPSKSE 356

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
            RR +    + +N+  + +    +  +D    G + +  GKK++
Sbjct: 357 GRRLITQGGLYVNDENVKDINAVVT-EDMFKQGYMLVRKGKKSY 399


>gi|254517941|ref|ZP_05129997.1| tyrosyl-tRNA synthetase [Clostridium sp. 7_2_43FAA]
 gi|226911690|gb|EEH96891.1| tyrosyl-tRNA synthetase [Clostridium sp. 7_2_43FAA]
          Length = 406

 Score =  511 bits (1316), Expect = e-143,   Method: Composition-based stats.
 Identities = 171/406 (42%), Positives = 257/406 (63%), Gaps = 7/406 (1%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           ++ L  L +RG+I Q ++  E   L  +  +T YIG+D TA SLH GH   LM +  +QK
Sbjct: 2   ANVLDELLDRGYIKQFTHEDETRELLEKEKITFYIGFDPTADSLHVGHFIALMFMAHMQK 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+PI+L+GGGT+++GDPS + + R M+  ++IQ N++ IK     FI +   K  A++
Sbjct: 62  AGHRPIALLGGGTAMVGDPSGKTDMRTMLTKEQIQHNVDSIKKQMERFIDFSDDK--AIL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  WL ++ Y+D LRE+G  FSVNRML+ E  + RL  E+ LSFLEFNYM++Q YDF 
Sbjct: 120 VNNADWLLNLNYVDFLREVGVHFSVNRMLTAECFKQRL--EKGLSFLEFNYMLMQGYDFY 177

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L + Y C++Q+GG DQW N+I G++L  R    +  A+T  LLT + G KMGKT+ GA+
Sbjct: 178 VLNQKYGCKMQLGGDDQWSNMIAGVELVRRKAQGQAMAMTCSLLTNSQGQKMGKTVGGAL 237

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
           WL+ E TSP++F+QYWRN+DDADV      LT +PM E+  +  ++G  INEAKK +A E
Sbjct: 238 WLDPEKTSPFDFYQYWRNVDDADVEKCLSLLTFVPMDEVREICSVEGAAINEAKKRLAFE 297

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           +T +VHG EEA KA +AA   F   +   ++PT++ISK+++  G  +L ++ +     S 
Sbjct: 298 VTKLVHGEEEATKAKSAAEALFSGGVDMSNVPTVTISKEKL--GSTILDIMAENKIVPSK 355

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
            E RR ++   + +N   ++     ++  D +  G+  L  GKKN+
Sbjct: 356 AEGRRLIQQGGLSLNGEKVTEVTRTLEESDLE-DGSALLKRGKKNY 400


>gi|315185721|gb|EFU19488.1| tyrosyl-tRNA synthetase [Spirochaeta thermophila DSM 6578]
          Length = 410

 Score =  511 bits (1316), Expect = e-143,   Method: Composition-based stats.
 Identities = 181/412 (43%), Positives = 247/412 (59%), Gaps = 5/412 (1%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           SD L++L+ERG + Q ++   L     +G VT Y+G D T  SLHAGHL  L     L  
Sbjct: 2   SDALAVLAERGLVKQCTDLEGLGARMQEGPVTFYLGIDPTGPSLHAGHLVPLFAATHLVN 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+ I L+GGGT+ IGDPS + E RR++  +EI  N   I+     F      K  ALM
Sbjct: 62  AGHRAIILIGGGTARIGDPSGKTEMRRILSVEEIDRNARAIQAQIERFFPVDGNK--ALM 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           LNN  WL  + YID LREIG  FSVNRMLSFE+ ++RL  E  LSF+EFNY +LQAYDF+
Sbjct: 120 LNNAEWLADLNYIDFLREIGRHFSVNRMLSFETYKARL--ETGLSFIEFNYQLLQAYDFL 177

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L + Y C LQ+GG DQWGNI+ GIDL  R++  + + LT PL+T + G KMGKT  GA+
Sbjct: 178 VLNERYGCTLQIGGDDQWGNIVAGIDLIRRVRGEEAYGLTMPLVTRSDGKKMGKTEKGAL 237

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
           +L+  M SPY F+QYWRN+ D DV +F K  T LP+ EI  +     + IN AK+ +A E
Sbjct: 238 FLDPSMVSPYEFFQYWRNVPDQDVATFLKYYTFLPIEEIATLTAHTDERINLAKERLAYE 297

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQ-HMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           +T ++HGREEA+KA  A+   F      +  +P + I ++E+  G+G++ L VK     S
Sbjct: 298 LTALIHGREEADKALEASRAAFGKGGQDRSSIPFVEIPREELEHGIGVVELFVKTDLCAS 357

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            +EARR +      I    + + +  ++LQD    G I L  GKK +    +
Sbjct: 358 KSEARRLISQGGAYIEGEQVKDLEQVVRLQDVPEAGEILLRAGKKRYFRVVV 409


>gi|110802117|ref|YP_697946.1| tyrosyl-tRNA synthetase [Clostridium perfringens SM101]
 gi|169344446|ref|ZP_02865415.1| tyrosyl-tRNA synthetase [Clostridium perfringens C str. JGS1495]
 gi|123341956|sp|Q0SVA4|SYY_CLOPS RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|110682618|gb|ABG85988.1| tyrosine--tRNA ligase [Clostridium perfringens SM101]
 gi|169297366|gb|EDS79475.1| tyrosyl-tRNA synthetase [Clostridium perfringens C str. JGS1495]
          Length = 406

 Score =  511 bits (1316), Expect = e-143,   Method: Composition-based stats.
 Identities = 178/406 (43%), Positives = 260/406 (64%), Gaps = 7/406 (1%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           ++ L  L ERG+I Q ++  E   L  +  VT YIG+D TA SLH GH   +M +  +QK
Sbjct: 2   ANVLDTLMERGYIKQFTHEAETRELLEKEKVTFYIGFDPTADSLHVGHFIAMMFMAHMQK 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+PI+L+GGGT+ IGDPS + + R+MM ++ I  N+  IK     FI +   K  A++
Sbjct: 62  AGHRPIALIGGGTATIGDPSGKTDMRKMMTNETIAHNVACIKKQMEKFIDFSDDK--AIL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  WL +  Y++ LRE+G  FSVNRMLS E  + RL+R   LSFLEFNYM++Q YDF 
Sbjct: 120 VNNADWLLNQNYVEFLREVGVHFSVNRMLSAECFKQRLER--GLSFLEFNYMLMQGYDFY 177

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L K Y+C++++GG DQW N+I G++L  +      +A+T  LLT + G KMGKT++GA+
Sbjct: 178 VLNKKYNCKMELGGDDQWSNMIAGVELVRKKSQKSAYAMTCTLLTNSEGQKMGKTVNGAL 237

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
           WL+ E TSPY F+QYWRN++DADV    K LT +PM E+ R++ L+G +INEAKK++A E
Sbjct: 238 WLDPEKTSPYEFYQYWRNVNDADVEKCLKLLTFIPMDEVRRLSSLEGSQINEAKKVLAFE 297

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           +T +VHG EEA KA  AA   F       ++PT  + KD++  G  LL ++V+A    S 
Sbjct: 298 VTKLVHGEEEATKAKQAAEALFGKGGDMSNVPTYEMGKDKL--GSELLDILVEAEIVPSK 355

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
            E +R +K   + +N   +++ K  ++  DF+  G + +  GKKN+
Sbjct: 356 AEGKRLVKQGGLSLNGEKVADFKKTLEEADFE-NGEVLIKRGKKNY 400


>gi|325569773|ref|ZP_08145797.1| tyrosine--tRNA ligase [Enterococcus casseliflavus ATCC 12755]
 gi|325157078|gb|EGC69244.1| tyrosine--tRNA ligase [Enterococcus casseliflavus ATCC 12755]
          Length = 429

 Score =  511 bits (1316), Expect = e-142,   Method: Composition-based stats.
 Identities = 156/418 (37%), Positives = 233/418 (55%), Gaps = 11/418 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +DF   L +RG +HQ ++   L    ++  V  YIG+D TA SLH GHL  +++L   Q+
Sbjct: 12  TDFFEELKQRGLVHQTTDEAALTKQLNEESVKLYIGFDPTADSLHIGHLLPILMLRRFQQ 71

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH PI+L+GGGT +IGDPSF+D+ R++     + E  + IK   S FI +   +  A++
Sbjct: 72  NGHVPIALVGGGTGMIGDPSFKDQERQLNTLDTVLEWSQSIKSQLSRFIDFDDQENPAII 131

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
            NN  WL  +K ID LR+ G  F++N M+S ESV+ R+  E  +S+ EF Y +LQAYDF+
Sbjct: 132 ANNYEWLGELKLIDFLRDTGKNFTINYMMSKESVKRRI--ETGISYTEFAYQLLQAYDFL 189

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L  N+ C LQ+GGSDQWGNI  GI+L  R +  + F LT PL+T A GTK GKT   A+
Sbjct: 190 NLYDNHGCLLQLGGSDQWGNITSGIELLRREREVQGFGLTMPLITKADGTKFGKTEGNAV 249

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIA 303
           WL+ + T+PY F+Q+W N DD D V F K  T L + EI  +            A+K +A
Sbjct: 250 WLDAKKTTPYEFFQFWINTDDRDAVKFLKYFTFLSLEEIAVIEAEFNAAPESRAAQKALA 309

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS-----ISKDEV--SRGMGLLTLI 356
            E+TT+VHG E  E+A   +   F  +I   +   I      +   +V     + ++ ++
Sbjct: 310 KEVTTLVHGAEAYEQAVRISASLFSGNIKELNAEEIEQGFKGVPSHQVTADDSLNIVEVL 369

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
             A    S  +AR  +++ AI IN   + +   +I+  D      + +  GKK + + 
Sbjct: 370 TTAKIEPSKRQAREDVQNGAIYINGERVQDLTYEIQASDRIGGKYVVIRRGKKKYFLL 427


>gi|167759092|ref|ZP_02431219.1| hypothetical protein CLOSCI_01439 [Clostridium scindens ATCC 35704]
 gi|167663210|gb|EDS07340.1| hypothetical protein CLOSCI_01439 [Clostridium scindens ATCC 35704]
          Length = 407

 Score =  511 bits (1316), Expect = e-142,   Method: Composition-based stats.
 Identities = 180/406 (44%), Positives = 250/406 (61%), Gaps = 7/406 (1%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
                L  RG I Q+++  E+  L + G  T YIG+D TA SLH GH   L L+  LQ+ 
Sbjct: 2   GIYEELQARGLIAQVTDEDEIKELVNTGKATFYIGFDPTADSLHVGHFMALCLMKRLQEA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           G+KPI+L+GGGT  IGDPS R + R MM  + IQ N +  K   S FI +  GK  ALM+
Sbjct: 62  GNKPIALIGGGTGYIGDPSGRSDMRSMMTPETIQHNCDCFKKQMSRFIDFSEGK--ALMV 119

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  + YIDLLREIG  FSVNRML+ E  + R+  E+ LSFLEFNYMI+Q+YDF  
Sbjct: 120 NNADWLLDLNYIDLLREIGPHFSVNRMLTAECYKQRM--EKGLSFLEFNYMIMQSYDFYM 177

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + Y C LQ GG DQW N++ G +L  R       A+T  LL  + G KMGKT SGA+W
Sbjct: 178 LFQKYGCNLQFGGDDQWSNMLGGTELIRRKLGKNACAMTITLLLNSEGKKMGKTQSGAVW 237

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           L+   TSP+ F+QYWRN+ DADV+   + LT LP+ EID+M   +G ++N AK+I+A E+
Sbjct: 238 LDPNKTSPFEFYQYWRNVADADVLKCIRMLTFLPLEEIDKMDSWEGAQLNAAKEILAFEL 297

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATST 365
           T +VHG EEA+K+  AA   F     +  MPT  +++++++ G + +L+++VK+G   S 
Sbjct: 298 TKLVHGEEEAQKSQEAARTLFSQGAAA-DMPTTELNEEDLTDGNIDILSMLVKSGLVPSK 356

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           +EARR ++   + ++   + +       +D    G I L  GKKN 
Sbjct: 357 SEARRAVQQGGVAVDGEKVEDIHATFAGEDMAGEG-IVLKKGKKNF 401


>gi|311069466|ref|YP_003974389.1| tyrosyl-tRNA synthetase [Bacillus atrophaeus 1942]
 gi|310869983|gb|ADP33458.1| tyrosyl-tRNA synthetase [Bacillus atrophaeus 1942]
          Length = 422

 Score =  511 bits (1316), Expect = e-142,   Method: Composition-based stats.
 Identities = 157/423 (37%), Positives = 239/423 (56%), Gaps = 19/423 (4%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           ++ L  LS RG I QI++   L+   ++  +  Y G+D TA SLH GHL  ++ L   Q 
Sbjct: 2   ANLLEDLSFRGLIQQITDEEGLNKQLNEDKIRLYSGFDPTADSLHIGHLLPILTLRRFQL 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH PI+L+GG T +IGDPS +   R +  +  + E  +KIK   S F+ +   +  A+M
Sbjct: 62  AGHHPIALVGGATGLIGDPSGKKAERTLNTADIVVEWSQKIKNQLSRFLDFDATENPAVM 121

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
            NN  W+  +  ID LR++G  F +N ML+ ++V SR++    +S+ EF+YMILQ++DF+
Sbjct: 122 ANNFDWIGKMNVIDFLRDVGKNFGINYMLAKDTVSSRIES--GISYTEFSYMILQSFDFL 179

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGER--LKTPKLFALTSPLLTTASGTKMGKTLSG 243
            L ++  C+LQ+GGSDQWGNI  G++L  +   +  K F LT PL+T A GTK GKT  G
Sbjct: 180 NLYRDQGCKLQIGGSDQWGNITAGLELIRKSEEEGAKAFGLTIPLVTKADGTKFGKTEGG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKI 301
           AIWL+KE TSPY F+Q+W N DD DVV + K  T L   EI+  A+      E  EA+K 
Sbjct: 240 AIWLDKEKTSPYEFYQFWINTDDRDVVKYLKYFTFLSKEEIEAYAEKTETAPEKREAQKR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMG 351
           +A E+T +VHGRE  E+A   +   F  +I            + +P++     E S+ + 
Sbjct: 300 LAEEVTELVHGREALEQAINISQALFSGNIKELSAQDVKVGFKDVPSLE---AERSQELT 356

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           L+ ++V++  + S  +AR  +K+ A+ IN    +     +  +D        L  GKK +
Sbjct: 357 LVDVLVESKLSPSKRQAREDIKNGAVYINGERQTEIGHILSAEDRIEDQFTVLRRGKKKY 416

Query: 412 IIC 414
            + 
Sbjct: 417 FLI 419


>gi|288549573|ref|ZP_05967462.2| tyrosine--tRNA ligase [Enterobacter cancerogenus ATCC 35316]
 gi|288318425|gb|EFC57363.1| tyrosine--tRNA ligase [Enterobacter cancerogenus ATCC 35316]
          Length = 428

 Score =  511 bits (1316), Expect = e-142,   Method: Composition-based stats.
 Identities = 157/419 (37%), Positives = 231/419 (55%), Gaps = 11/419 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q 
Sbjct: 8   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQM 67

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++     +QE ++KI+   + F+ +  G   A+ 
Sbjct: 68  AGHKPVALVGGATGLIGDPSFKAAERKLNTEDTVQEWVDKIRKQVAPFLDFNCGDNAAIA 127

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDF 184
            NN  W   +  +  LR+IG  FSVN+M++ E+V+ RL R +Q +SF EF+Y +LQ YDF
Sbjct: 128 ANNYDWFGGMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDQGISFTEFSYNLLQGYDF 187

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K +   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 188 ACLNKLHGVALQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 247

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + +  I   +   K  GK    A+ +
Sbjct: 248 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMDIEAINALEEEDKNSGKAPR-AQYV 306

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTL 355
           +A E+T +VHG E    A       F+ ++        + +    +   E+ +G  L+  
Sbjct: 307 LADEVTKLVHGEEGLAAAKRITASLFNGTLSDLSEADFEQLAQDGVPMVEMEKGADLMQA 366

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +V +    S  +AR+ + SNAI IN    ++ +      D        L  GKKN+ + 
Sbjct: 367 LVDSELQPSRGQARKTIASNAITINGEKQADPEYTFVEGDRLYGRYTLLRRGKKNYCLV 425


>gi|164688146|ref|ZP_02212174.1| hypothetical protein CLOBAR_01791 [Clostridium bartlettii DSM
           16795]
 gi|164602559|gb|EDQ96024.1| hypothetical protein CLOBAR_01791 [Clostridium bartlettii DSM
           16795]
          Length = 408

 Score =  511 bits (1316), Expect = e-142,   Method: Composition-based stats.
 Identities = 172/393 (43%), Positives = 254/393 (64%), Gaps = 4/393 (1%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L ERG I Q+++  EL  L + G  T YIG+D TA SLH GH   L L+  LQ +G
Sbjct: 3   VYEELVERGLIAQVTDEDELKELINAGKATFYIGFDATADSLHVGHFMALCLMKRLQMSG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           ++PI+L+GGGT++IGDPS R + R+MM  + I  N E  K   S FI +   K  A+++N
Sbjct: 63  NRPIALVGGGTTMIGDPSGRSDMRQMMTPEMINHNCECFKKQMSKFIDFSDDK--AVLVN 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  + Y+D+LRE+GS FSVNRMLS E  + R+ RE  L+FLEFNYMI+QAYDF +L
Sbjct: 121 NADWLLDLNYVDVLREVGSCFSVNRMLSAECYKQRMDREGGLTFLEFNYMIMQAYDFYQL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            + Y C++Q+GG+DQW N++ G DL  R      +A+T  LL  + G KMGKT SGA+WL
Sbjct: 181 YQKYGCQMQLGGNDQWSNMLAGTDLIRRKLGENAYAMTITLLLNSEGKKMGKTQSGAVWL 240

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           +   TSP+ F+QYWRN+ DADV+   K LT LP+ EI  M K +G E+N+AK+I+A E+T
Sbjct: 241 DPNKTSPFEFYQYWRNVSDADVIKCLKMLTFLPLEEIKEMEKWEGSELNKAKEILAYELT 300

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTN 366
           T+VH  E+A+ A  +A   F    ++ +MPT+ ++  ++  G + +++L+VKA  A S +
Sbjct: 301 TLVHSEEDAKAAQESARALFSQG-NAANMPTVELADSDLEDGKIDIISLLVKADLAPSRS 359

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDST 399
           EARR+++   + +N   +++ +  +  ++    
Sbjct: 360 EARRNIQQGGVSVNGEKVTDIQATVAKEELVEG 392


>gi|99080764|ref|YP_612918.1| tyrosyl-tRNA synthetase [Ruegeria sp. TM1040]
 gi|123379010|sp|Q1GI60|SYY_SILST RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|99037044|gb|ABF63656.1| tyrosyl-tRNA synthetase [Ruegeria sp. TM1040]
          Length = 417

 Score =  510 bits (1315), Expect = e-142,   Method: Composition-based stats.
 Identities = 220/414 (53%), Positives = 284/414 (68%), Gaps = 2/414 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KSDF++I+ ERGF+   ++ + LD     G  TAYIGYD TA SLH GHL  +M+L WLQ
Sbjct: 6   KSDFIAIMMERGFLADCTDYQGLDEALVSGTQTAYIGYDATAQSLHVGHLLNIMMLRWLQ 65

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           KTGH+PI+LMGGGT+ +GDPSFR + R ++  ++I  NI  ++ +F+ ++ Y   K  A+
Sbjct: 66  KTGHRPITLMGGGTTKVGDPSFRSDERPLLGPEQIDANIAGMQKVFAKYLDYSDAKNGAM 125

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           MLNN  WL  + Y++ LR+IG  FSVNRMLSFESV+SRL REQSLSFLEFNYMILQAYDF
Sbjct: 126 MLNNAEWLDGLNYLEFLRDIGRHFSVNRMLSFESVKSRLDREQSLSFLEFNYMILQAYDF 185

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL + Y C LQMGGSDQWGNI+ GIDL  R+   +++ LTSPLLTT+ G KMGK+  GA
Sbjct: 186 LELNRRYGCVLQMGGSDQWGNIVNGIDLTRRVLENEIYGLTSPLLTTSDGRKMGKSQGGA 245

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           IWLN EM SPY FWQ+WRN  DADV  F K  T LP+ E DR+  LQG EINE K I+A 
Sbjct: 246 IWLNDEMLSPYEFWQFWRNTTDADVGRFLKLYTELPVEECDRLGALQGSEINEGKIILAN 305

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E+TT++HG E A  A   A E F+       +PT+S+S  E+  GM ++ LIVK+G A S
Sbjct: 306 EVTTLLHGAEAARAAEATAREVFEKGGVGDDLPTLSLSPAELGDGMSIVQLIVKSGLAKS 365

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLCG 418
             EA+R +  N  K++++ +++  L I      S   IKLS GKK H +  L G
Sbjct: 366 GKEAKRLISENGAKLDDAPLTDAGLMIDAAALASP--IKLSAGKKRHALVQLEG 417


>gi|240139739|ref|YP_002964216.1| tyrosine tRNA synthetase [Methylobacterium extorquens AM1]
 gi|240009713|gb|ACS40939.1| tyrosine tRNA synthetase [Methylobacterium extorquens AM1]
          Length = 423

 Score =  510 bits (1315), Expect = e-142,   Method: Composition-based stats.
 Identities = 218/415 (52%), Positives = 297/415 (71%), Gaps = 2/415 (0%)

Query: 3   AFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
           A KSDF+ +L ERG+IHQ S+   +D L ++G +T Y GYD TA+SLH GHL  +M+L W
Sbjct: 7   APKSDFIRVLQERGYIHQASDLAGIDALAAEGGLTTYTGYDCTAASLHVGHLLSIMMLHW 66

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD 122
           LQKTG KP+ LMGGGT+ +GDPS RDE+R+++  ++I+ N E IK  FS F+ +G     
Sbjct: 67  LQKTGGKPVVLMGGGTTRVGDPSGRDETRKILTLEQIEANKEGIKQTFSRFLSFGESGNG 126

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
           A+M++N  WL  + YI++LR+IG  FSVNRM+S +SVR RL+R+Q LSFLEFNYMILQ+Y
Sbjct: 127 AVMVDNAEWLTKLNYIEMLRDIGRHFSVNRMMSMDSVRMRLERDQELSFLEFNYMILQSY 186

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DFVEL + +  RLQMGGSDQWGNI+ GIDLG R+ TP+L+ALT PLLTT+SG KMGKT +
Sbjct: 187 DFVELNRRFGTRLQMGGSDQWGNIVNGIDLGRRMGTPQLYALTCPLLTTSSGAKMGKTAA 246

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKII 302
           GA+WL+  M SPY++WQ+WRN +DADV  F K  T LP+ EI+R+A LQG EINEAK ++
Sbjct: 247 GAVWLDAGMLSPYDYWQFWRNTEDADVGRFLKLFTLLPLPEIERLAALQGAEINEAKTVL 306

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLI--VKAG 360
           ATE T ++HG + A  AA  A + F     +Q +PTI +    +  G+G+LT      A 
Sbjct: 307 ATEATALMHGPDAAAAAAETARKTFVEGTLAQSLPTIPVPPAVLEAGLGVLTAFGPDYAK 366

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
              ST+EARR +K   +++N+  +S+EK  ++ +D  + G IKLSFG+K H++  
Sbjct: 367 LVPSTSEARRQIKGGGLRVNDVQVSDEKAVLRKEDLAAEGVIKLSFGRKKHVLLR 421


>gi|225570903|ref|ZP_03779926.1| hypothetical protein CLOHYLEM_07007 [Clostridium hylemonae DSM
           15053]
 gi|225160365|gb|EEG72984.1| hypothetical protein CLOHYLEM_07007 [Clostridium hylemonae DSM
           15053]
          Length = 407

 Score =  510 bits (1315), Expect = e-142,   Method: Composition-based stats.
 Identities = 180/411 (43%), Positives = 253/411 (61%), Gaps = 7/411 (1%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
                L  RG I Q+++  E+  L + G  T YIG+D TA SLH GH   L L+  LQ  
Sbjct: 2   GIYEELQARGLIAQVTDEDEIRELINNGKATFYIGFDPTADSLHVGHFMALCLMKRLQDA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           G+KPI+L+GGGT  IGDPS R + R MM  + IQ N +  K   S FI +  GK  ALM+
Sbjct: 62  GNKPIALIGGGTGYIGDPSGRTDMRSMMTPETIQHNCDCFKRQMSKFIDFSEGK--ALMV 119

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  + YID+LREIG  FSVNRML+ E  + R+  E+ L+FLEFNYMI+Q++DF  
Sbjct: 120 NNADWLLDLNYIDMLREIGPHFSVNRMLAAECYKQRM--EKGLTFLEFNYMIMQSFDFYM 177

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L +NY C +Q GG DQW N++ G +L  R       A+T  LL  + G KMGKT +GA+W
Sbjct: 178 LYQNYGCNMQFGGDDQWANMLGGTELIRRKLGKNACAMTITLLLNSEGKKMGKTQNGAVW 237

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           L+ E TSP++F+QYWRN+ D DV+   + LT LP+ EID+M   +G ++N AK+I+A E+
Sbjct: 238 LDPEKTSPFDFYQYWRNVGDTDVLKCIRMLTFLPLEEIDKMDGWEGAQLNTAKEILAYEL 297

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATST 365
           T +VHG EEA KA  +A   F     +Q MPT  I+ D++  G + +LTL++K+G   S 
Sbjct: 298 TKLVHGEEEARKAQESARALFSQGAAAQ-MPTAEITGDDLEDGRIDILTLLLKSGLVPSK 356

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +EARR ++   + ++   +++ + +I   D  +   + L  GKKN     L
Sbjct: 357 SEARRAVQQGGVAVDGEKVTDIQ-EIFPSDAFAGEGMILKKGKKNFRKVVL 406


>gi|163852404|ref|YP_001640447.1| tyrosyl-tRNA synthetase [Methylobacterium extorquens PA1]
 gi|163664009|gb|ABY31376.1| tyrosyl-tRNA synthetase [Methylobacterium extorquens PA1]
          Length = 423

 Score =  510 bits (1315), Expect = e-142,   Method: Composition-based stats.
 Identities = 218/415 (52%), Positives = 297/415 (71%), Gaps = 2/415 (0%)

Query: 3   AFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
           A KSDF+ +L ERG+IHQ S+   +D L ++G +T Y GYD TA+SLH GHL  +M+L W
Sbjct: 7   APKSDFIRVLQERGYIHQASDLAGIDALAAEGGLTTYTGYDCTAASLHVGHLLSIMMLHW 66

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD 122
           LQKTG KP+ LMGGGT+ +GDPS RDE+R+++  ++I+ N E IK  FS F+ +G     
Sbjct: 67  LQKTGGKPVVLMGGGTTRVGDPSGRDETRKILTLEQIEANKEGIKQTFSRFLSFGESGNG 126

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
           A+M++N  WL  + YI++LR+IG  FSVNRM+S +SVR RL+R+Q LSFLEFNYMILQ+Y
Sbjct: 127 AVMVDNAEWLTKLNYIEMLRDIGRHFSVNRMMSMDSVRMRLERDQELSFLEFNYMILQSY 186

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DFVEL + +  RLQMGGSDQWGNI+ GIDLG R+ TP+L+ALT PLLTT+SG KMGKT +
Sbjct: 187 DFVELNRRFGTRLQMGGSDQWGNIVNGIDLGRRMGTPQLYALTCPLLTTSSGAKMGKTAA 246

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKII 302
           GA+WL+  M SPY++WQ+WRN +DADV  F K  T LP+ EI+R+A LQG EINEAK ++
Sbjct: 247 GAVWLDAGMLSPYDYWQFWRNTEDADVGRFLKLFTLLPLPEIERLAALQGAEINEAKTVL 306

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLI--VKAG 360
           ATE T ++HG + A  AA  A + F     +Q +PTI +    +  G+G+LT      A 
Sbjct: 307 ATEATALMHGPDAAAAAAETARKTFVEGTLAQSLPTIPVPSALLEAGLGVLTAFGPDYAK 366

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
              ST+EARR +K   +++N+  +S+EK  ++ +D  + G IKLSFG+K H++  
Sbjct: 367 LVPSTSEARRQIKGGGLRVNDVQVSDEKAVLRKEDLTAEGVIKLSFGRKKHVLLR 421


>gi|157693371|ref|YP_001487833.1| tyrosyl-tRNA synthetase [Bacillus pumilus SAFR-032]
 gi|189083642|sp|A8FGA6|SYY_BACP2 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|157682129|gb|ABV63273.1| tyrosine--tRNA ligase [Bacillus pumilus SAFR-032]
          Length = 422

 Score =  510 bits (1315), Expect = e-142,   Method: Composition-based stats.
 Identities = 158/420 (37%), Positives = 236/420 (56%), Gaps = 13/420 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S  +  LS RG I Q ++   L  L ++  +  Y G+D TA SLH GHL  ++ L   Q+
Sbjct: 2   SQLMEELSFRGLIQQQTDEEGLTKLLAEEKIKLYSGFDPTADSLHIGHLLPILTLRRFQE 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH PI+L+GG T +IGDPSF+   R +  ++ ++   +KIKG  S F+ +  G+  A++
Sbjct: 62  AGHHPIALVGGATGLIGDPSFKKAERSLNPAEIVEHWSDKIKGQLSQFLDFEAGENPAVI 121

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  W+  +  I  LR+IG  F VN ML+ + V SR+  E  +S+ EF+Y+ILQ+ DF+
Sbjct: 122 VNNYDWISQMNVITFLRDIGKNFGVNFMLAKDIVSSRI--ETGISYTEFSYVILQSLDFL 179

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGE--RLKTPKLFALTSPLLTTASGTKMGKTLSG 243
            L +N +C+LQ+GGSDQWGNI  G++L      +  K F LT PL+T A GTK GKT  G
Sbjct: 180 NLYRNENCKLQIGGSDQWGNITSGLELIRKSEAEGAKAFGLTMPLVTKADGTKFGKTEGG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKI 301
           AIWL+KE TSPY F+Q+W N DD DVV + K  T L   EI    +      E  EA++ 
Sbjct: 240 AIWLDKEKTSPYEFYQFWINTDDRDVVKYLKYFTFLSKEEIASYEEKVQTAPEKREAQRR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVS-------RGMGLLT 354
           +A E+TT+VHGRE  E+A   +   F   I S     + +   +V          + L+ 
Sbjct: 300 LAEEVTTLVHGRESLEQAVNISNALFKGEIKSLSAEEVKVGFKDVPSMEKSSTEELTLVD 359

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           L+V++  + S  +AR  + + A+ IN    +++   +  +D        L  GKK + + 
Sbjct: 360 LLVESKLSPSKRQAREDITNGAVSINGERQTDKDYVLSAEDRIENQFTVLRRGKKKYFLV 419


>gi|318057733|ref|ZP_07976456.1| tyrosyl-tRNA synthetase [Streptomyces sp. SA3_actG]
          Length = 422

 Score =  510 bits (1314), Expect = e-142,   Method: Composition-based stats.
 Identities = 146/422 (34%), Positives = 234/422 (55%), Gaps = 11/422 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +D +  L  RG   Q ++   L    + G VT Y G+D TA+SLH GHL Q++ +  LQ+
Sbjct: 2   TDIVDDLKWRGLFAQSTDEEALRKALANGPVTFYCGFDPTAASLHVGHLVQVLTVRRLQQ 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+P++L+GG T  IGDP      R +     I E + +++     F+ +  G + A M
Sbjct: 62  AGHRPLALVGGATGQIGDPRP-TAERTLNDPATIAEWVNRLRAQIEPFLDF-DGPSAARM 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  W   +  I  LR+IG  F VN+ML+ ESV  RL+ EQ +S+ EF+Y +LQA DF+
Sbjct: 120 VNNLDWTSGLSAIAFLRDIGKHFRVNKMLTKESVARRLESEQGISYTEFSYQLLQAMDFL 179

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASGTKMGKTLSGA 244
           EL + + C LQ GGSDQWGN+  G+DL  R++   ++ AL +PL+T A GTK GK+ SGA
Sbjct: 180 ELYRRHGCVLQQGGSDQWGNLTAGVDLIHRVEPEAQVHALATPLMTKADGTKFGKSESGA 239

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKII 302
           +WL+  MT+PY F+Q+W N+DD D+  + + L+  P +E++ +     +  +   A++ +
Sbjct: 240 VWLDPAMTTPYAFYQFWLNVDDRDISRYTRILSFRPRAELEELEAVTAERPQARTAQRAL 299

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQ-HMPTI-----SISKDEVSRGMGLLTLI 356
           A E+TT+VHG  +      A+   F     ++    T+      + +  V+    ++ L+
Sbjct: 300 AEELTTLVHGEAQTRAVVAASRALFGQGELAELDEATLAAALGELPRASVAEPASVVDLL 359

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V+ G   S + ARR +K     +NN+ ++ E       +   +  + L  GKKN     +
Sbjct: 360 VETGLVASKSAARRTIKEGGAYVNNAKVTAEDAVPAASELLHSRWLVLRRGKKNLAAVEV 419

Query: 417 CG 418
            G
Sbjct: 420 TG 421


>gi|302518284|ref|ZP_07270626.1| tyrosyl-tRNA synthetase [Streptomyces sp. SPB78]
 gi|302427179|gb|EFK98994.1| tyrosyl-tRNA synthetase [Streptomyces sp. SPB78]
          Length = 422

 Score =  510 bits (1314), Expect = e-142,   Method: Composition-based stats.
 Identities = 146/422 (34%), Positives = 234/422 (55%), Gaps = 11/422 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +D +  L  RG   Q ++   L    + G VT Y G+D TA+SLH GHL Q++ +  LQ+
Sbjct: 2   TDIVDDLKWRGLFAQSTDEEALRKALANGPVTFYCGFDPTAASLHVGHLVQVLTVRRLQQ 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+P++L+GG T  IGDP      R +     I E + +++     F+ +  G + A M
Sbjct: 62  AGHRPLALVGGATGQIGDPRP-TAERTLNDPATIAEWVNRLRAQIEPFLDF-DGPSAARM 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  W   +  I  LR+IG  F VN+ML+ ESV  RL+ EQ +S+ EF+Y +LQA DF+
Sbjct: 120 VNNLDWTSGLSAIAFLRDIGKHFRVNKMLTKESVARRLESEQGISYTEFSYQLLQAMDFL 179

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASGTKMGKTLSGA 244
           EL + + C LQ GGSDQWGN+  G+DL  R++   ++ AL +PL+T A GTK GK+ SGA
Sbjct: 180 ELYRRHGCVLQQGGSDQWGNLTAGVDLIHRVEPEAQVHALATPLMTKADGTKFGKSESGA 239

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKII 302
           +WL+  MT+PY F+Q+W N+DD D+  + + L+  P +E++ +     +  +   A++ +
Sbjct: 240 VWLDPAMTTPYAFYQFWVNVDDRDISRYTRILSFRPRAELEELEAVTAERPQARTAQRAL 299

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQ-HMPTI-----SISKDEVSRGMGLLTLI 356
           A E+TT+VHG  +      A+   F     ++    T+      + +  V+    ++ L+
Sbjct: 300 AEELTTLVHGEAQTRAVVAASRALFGQGELAELDEATLAAALGELPRASVAEPASVVDLL 359

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V+ G   S + ARR +K     +NN+ ++ E       +   +  + L  GKKN     +
Sbjct: 360 VETGLVASKSAARRTIKEGGAYVNNAKVTAEDAVPAASELLHSRWLVLRRGKKNLAAVEV 419

Query: 417 CG 418
            G
Sbjct: 420 TG 421


>gi|85702960|ref|ZP_01034064.1| tyrosyl-tRNA synthetase [Roseovarius sp. 217]
 gi|85671888|gb|EAQ26745.1| tyrosyl-tRNA synthetase [Roseovarius sp. 217]
          Length = 417

 Score =  510 bits (1314), Expect = e-142,   Method: Composition-based stats.
 Identities = 215/414 (51%), Positives = 285/414 (68%), Gaps = 2/414 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KSDFLS++  RG++   ++ + LD   S G VTAYIGYD TA SLH GHL  +M+L WLQ
Sbjct: 6   KSDFLSVMMSRGYLADCTDYQGLDEALSAGTVTAYIGYDATAKSLHVGHLLNIMMLRWLQ 65

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           KTGH+PI+LMGGGT+ +GDPSFR + R ++   +I ENI  +  +F+ ++ YG G  DAL
Sbjct: 66  KTGHRPITLMGGGTTKVGDPSFRSDERPLLSPAQIDENIAGMNRVFARYLDYGEGPQDAL 125

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           MLNN  WL  + Y++ LR+IG  FSVNRML+FESV+SRL REQSLSFLEFNYMILQAYDF
Sbjct: 126 MLNNADWLDGLNYLEFLRDIGRHFSVNRMLAFESVKSRLDREQSLSFLEFNYMILQAYDF 185

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +E+ + + C LQMGGSDQWGNII GIDL  R+   ++F LTSPLLTT+ G KMGK+  GA
Sbjct: 186 LEINRRHGCLLQMGGSDQWGNIINGIDLTRRVIDHEVFGLTSPLLTTSDGRKMGKSAGGA 245

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WL+ +M SPY FWQ+WRN  DAD   F K  T LP+ + DR+  L+G +IN AK I+A 
Sbjct: 246 VWLSADMLSPYEFWQFWRNTTDADTGRFLKLYTELPIEDCDRLGALEGSDINAAKIILAN 305

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           EITT++HG E A+ A   A E F+       +PTI ++  E++ G+ ++ LIV+AG A S
Sbjct: 306 EITTLLHGAEAAQAAEATAREVFEHGGVGDDLPTIEVTAQELAEGISIVQLIVRAGLAKS 365

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLCG 418
             EA+R +  N  ++++  +++  L I      S   IKLS GKK H +  L G
Sbjct: 366 GKEAKRLITENGARLDDEPLTDAGLMIDAGALKSP--IKLSAGKKRHALVKLEG 417


>gi|242239132|ref|YP_002987313.1| tyrosyl-tRNA synthetase [Dickeya dadantii Ech703]
 gi|242131189|gb|ACS85491.1| tyrosyl-tRNA synthetase [Dickeya dadantii Ech703]
          Length = 424

 Score =  510 bits (1314), Expect = e-142,   Method: Composition-based stats.
 Identities = 156/419 (37%), Positives = 228/419 (54%), Gaps = 11/419 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q 
Sbjct: 3   SNLIQQLQERGLVAQVTDEAALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQM 62

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + + E ++KI+   + F+ +  G+  A+ 
Sbjct: 63  AGHKPVALVGGATGLIGDPSFKAAERKLNTEETVSEWVDKIRRQAAPFLDFDCGENSAVA 122

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYDF 184
            NN  W  S+  +  LR+IG  FSVN+M++ E+V+ RL R+   +SF EF+Y +LQ YDF
Sbjct: 123 ANNYDWFGSMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDVGISFTEFSYNLLQGYDF 182

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L   +   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT SGA
Sbjct: 183 ASLNALHGVELQIGGSDQWGNITSGIDLTRRLHQKQVFGLTVPLITKSDGTKFGKTESGA 242

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T L +  I   +   K  G     A+ +
Sbjct: 243 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFLDIDAINALEEEDKNSGTAPR-AQSV 301

Query: 302 IATEITTMVHGREEAEKAATAAMECFDM------SIHSQHMPTISISKDEVSRGMGLLTL 355
           +A E+T +VHG E    A       F+             +    +   E+ +G  L   
Sbjct: 302 LAEEVTRLVHGEEGLVAARRITQSLFNGHLGELTEADFAQLAQDGVPMVELEKGADLQQA 361

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +V +    S  +AR+ + SNAI IN    S+ +  +   D        L  GKKN+ + 
Sbjct: 362 LVDSELQPSRGQARKTIASNAITINGEKQSDPEYVLADSDRLFGRYTLLRRGKKNYCLV 420


>gi|197285245|ref|YP_002151117.1| tyrosyl-tRNA synthetase [Proteus mirabilis HI4320]
 gi|227355671|ref|ZP_03840065.1| tyrosyl-tRNA synthetase [Proteus mirabilis ATCC 29906]
 gi|194682732|emb|CAR42933.1| tyrosyl-tRNA synthetase [Proteus mirabilis HI4320]
 gi|227164278|gb|EEI49171.1| tyrosyl-tRNA synthetase [Proteus mirabilis ATCC 29906]
          Length = 428

 Score =  510 bits (1313), Expect = e-142,   Method: Composition-based stats.
 Identities = 157/425 (36%), Positives = 232/425 (54%), Gaps = 11/425 (2%)

Query: 1   MPAFKS--DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLM 58
           M +  S  + ++ L ERG I Q+++   L     QG +  Y G+D TA SLH GHL  L+
Sbjct: 1   MESLMSSKNLITQLQERGLIAQVTDEAALVERLEQGPIALYCGFDPTADSLHLGHLVPLL 60

Query: 59  LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT 118
            L   Q  GHKP++L+GG T +IGDPSF+   R++     + E +EKI+   S F+ +  
Sbjct: 61  CLKRFQLAGHKPVALVGGATGLIGDPSFKATERKLNTQDTVHEWVEKIRKQVSPFLDFDR 120

Query: 119 GKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYM 177
           G+  A + NN  W   +  +  LR+IG  FSVN+M++ E+V+ RL R+   +SF EF Y 
Sbjct: 121 GENSAELANNYDWFGQMDVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDVGISFTEFAYN 180

Query: 178 ILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
           +LQAYDF  L KN    LQ+GGSDQWGNI  GIDL  R    ++F +T PL+T + GTK 
Sbjct: 181 LLQAYDFASLNKNLGVELQIGGSDQWGNITSGIDLTRRFNQKQVFGMTVPLITKSDGTKF 240

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEI 295
           GKT  GA+WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+ + +      + 
Sbjct: 241 GKTEGGAVWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINALEEEDKNSGQA 300

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRG 349
             A++++A ++T +VHG E    A       F  +I        + +    +   E+ +G
Sbjct: 301 PRAQRVLAEQVTRLVHGEEGLTAAKRITDSLFSGAIADLTQADLEQLAQDGMPTIELEKG 360

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
             L   +V A    S  +AR  + SNA+ IN     N +   + +DF       L  GKK
Sbjct: 361 NDLQQALVNAELVPSRGQARTMIGSNAVSINGEKQDNPEYVFEEKDFLFGHYSILRRGKK 420

Query: 410 NHIIC 414
           ++ + 
Sbjct: 421 HYCLV 425


>gi|94962153|gb|ABF48398.1| O-propargyltyrosyl tRNA synthetase [synthetic construct]
          Length = 424

 Score =  510 bits (1313), Expect = e-142,   Method: Composition-based stats.
 Identities = 159/419 (37%), Positives = 236/419 (56%), Gaps = 11/419 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +    G+D TA SLH GHL  L+ L   Q+
Sbjct: 4   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALGCGFDPTADSLHLGHLVPLLCLKRFQQ 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +QE ++KI+   + F+ +  G+  A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDCGENSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDF 184
            NN  W  ++  +  LR+IG  FSVN+M++ E+V+ RL RE Q +SF EF+Y +LQ Y  
Sbjct: 124 ANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNREDQGISFTEFSYNLLQGYSM 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K Y   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 184 ACLNKQYGVVLQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI   +   K  GK    A+ +
Sbjct: 244 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINALEEEDKNSGKAPR-AQYV 302

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTL 355
           +A ++T +VHG E  + A       F  S+ +      + +    +   E+ +G  L+  
Sbjct: 303 LAEQVTRLVHGEEGLQAAKRITECLFSGSLSALSEADFEQLAQDGVPMVEMEKGADLMQA 362

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +V +    S  +AR+ + SNAI IN    S+ +   K +D        L  GKKN+ + 
Sbjct: 363 LVDSELQPSRGQARKTIASNAITINGEKQSDPEYFFKEEDRLFGRFTLLRRGKKNYCLI 421


>gi|149202768|ref|ZP_01879740.1| tyrosyl-tRNA synthetase [Roseovarius sp. TM1035]
 gi|149144050|gb|EDM32084.1| tyrosyl-tRNA synthetase [Roseovarius sp. TM1035]
          Length = 417

 Score =  509 bits (1312), Expect = e-142,   Method: Composition-based stats.
 Identities = 211/413 (51%), Positives = 283/413 (68%), Gaps = 2/413 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KS+FL+++  RG++   ++ + LD   S G VTAYIGYD TA SLH GHL  +M+L WLQ
Sbjct: 6   KSEFLNVMMSRGYLADCTDYQGLDEALSAGTVTAYIGYDATAKSLHVGHLLNIMMLRWLQ 65

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           KTGH+PI+LMGGGT+ +GDPSFR + R ++   +I +NI  +  +F+ ++ YG G  DA+
Sbjct: 66  KTGHRPITLMGGGTTKVGDPSFRSDERPLLSPAQIDDNIAGMNRVFARYLAYGEGPQDAM 125

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           MLNN  WL  + Y++ LR+IG  FSVNRMLSFESV+SRL REQSLSFLEFNYMILQAYDF
Sbjct: 126 MLNNAEWLDGLNYLEFLRDIGRHFSVNRMLSFESVKSRLDREQSLSFLEFNYMILQAYDF 185

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL + + C LQMGGSDQWGNII GIDL  R+   ++F LTSPLLTT+ G KMGK+  GA
Sbjct: 186 LELNRRHGCVLQMGGSDQWGNIINGIDLTRRVIDHEVFGLTSPLLTTSDGRKMGKSAGGA 245

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WL+ +M SPY FWQ+WRN  DAD   F K  T LP+ E DR+  L+G +IN AK I+A 
Sbjct: 246 VWLSGDMLSPYEFWQFWRNTTDADTGRFLKLYTELPVEECDRLGALEGSDINAAKIILAN 305

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
            +TT++HG E A  A   A E F+       +PT+ ++ DE++ G+ ++ LIV+AG A S
Sbjct: 306 AVTTLLHGPEAAAAAEATAREVFEHGGVGDDLPTVEVTADELAEGISIVQLIVRAGLAKS 365

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
             EA+R +  N  ++++  +++  L I      S   IKLS GKK H +  L 
Sbjct: 366 GKEAKRLITENGARLDDEPLTDAGLMIDAAALTSP--IKLSAGKKRHALVKLS 416


>gi|251789337|ref|YP_003004058.1| tyrosyl-tRNA synthetase [Dickeya zeae Ech1591]
 gi|247537958|gb|ACT06579.1| tyrosyl-tRNA synthetase [Dickeya zeae Ech1591]
          Length = 424

 Score =  509 bits (1311), Expect = e-142,   Method: Composition-based stats.
 Identities = 156/418 (37%), Positives = 228/418 (54%), Gaps = 9/418 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q 
Sbjct: 3   SNLIQQLQERGLVAQVTDEGALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQM 62

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++     +QE +EKI+   + F+ +  G   A+ 
Sbjct: 63  AGHKPVALVGGATGLIGDPSFKAAERKLNTEDTVQEWVEKIRRQVAPFLDFDCGDNSAVA 122

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYDF 184
            NN  W  S+  +  LR+IG  FSVN+M++ E+V+ RL R+   +SF EF+Y +LQ YDF
Sbjct: 123 ANNYDWFGSMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDVGISFTEFSYNLLQGYDF 182

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L   +   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT SGA
Sbjct: 183 ASLNALHGVELQIGGSDQWGNITSGIDLTRRLHQKQVFGLTVPLITKSDGTKFGKTESGA 242

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE--INEAKKII 302
           +WL+ + TSPY F+Q+W N  DADV  F K  T L +  I+ + +          A+ ++
Sbjct: 243 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFLDIDVINALEEEDKNSGVAPRAQYVL 302

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTLI 356
           A E+T +VHG E    A       F+ ++          +    +   E++ G  L   +
Sbjct: 303 AEEVTRLVHGEEGLVAAKRITQSLFNGNLSDLTEADFAQLAQDGVPMVELATGADLQQAL 362

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           V +    S  +AR+ + SNAI IN    S+ +      D        L  GKKN+ + 
Sbjct: 363 VDSELQPSRGQARKTIASNAITINGEKQSDPEYTFTDADRLFGCYTLLRRGKKNYCLV 420


>gi|254469446|ref|ZP_05082851.1| tyrosyl-tRNA synthetase [Pseudovibrio sp. JE062]
 gi|211961281|gb|EEA96476.1| tyrosyl-tRNA synthetase [Pseudovibrio sp. JE062]
          Length = 406

 Score =  509 bits (1311), Expect = e-142,   Method: Composition-based stats.
 Identities = 214/404 (52%), Positives = 293/404 (72%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           + ERGF+HQ+SN   LD LC+   VTAYIG+D TASSLH G L Q+M+L+W Q+ GH+ I
Sbjct: 1   MEERGFLHQLSNAEGLDELCANETVTAYIGFDCTASSLHVGSLVQIMMLYWFQQAGHRAI 60

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +LMG GT+ +GDP+ +DESR+++  + I++N   IK +F  F+K+G G +DA+M++N  W
Sbjct: 61  TLMGSGTTRVGDPTGKDESRKVLTDETIEDNKNGIKQVFEKFLKFGDGPSDAMMMDNADW 120

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L  + Y+D LR++G +FSVN+M+  +SVR RL+REQ LSFLEFNYM+LQ YD++E+ +  
Sbjct: 121 LLKLNYMDFLRDVGRYFSVNQMIQRDSVRLRLEREQHLSFLEFNYMLLQGYDYLEIHRRT 180

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
            CRLQMGGSDQW NI+ G+DLG RL   +LFALT+PLLTTASG KMGKT +GA+WLN +M
Sbjct: 181 GCRLQMGGSDQWSNILSGVDLGRRLADKELFALTTPLLTTASGAKMGKTAAGAVWLNADM 240

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVH 311
            SPY++WQ+WRN +DADV  F K  T LPM EI R+A L+G  INEAKK++ATE T ++H
Sbjct: 241 LSPYDYWQFWRNTEDADVEKFLKLFTILPMDEIKRLAALEGAGINEAKKVLATEATALLH 300

Query: 312 GREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRH 371
           GREEAEKAA  A + F+   ++  +PTI I+  E++ G+G+L + V AG  TS  E RR+
Sbjct: 301 GREEAEKAAETARKAFEEGANAAGLPTIEIAAAELNDGIGILNVFVTAGLCTSNGEVRRN 360

Query: 372 LKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +K  A++IN+    +   +I   D    G IKLS GKK H++  
Sbjct: 361 IKGGAVRINDKAEQDHTREITEADLTDDGVIKLSLGKKKHVLVK 404


>gi|148656197|ref|YP_001276402.1| tyrosyl-tRNA synthetase [Roseiflexus sp. RS-1]
 gi|189029768|sp|A5UUZ9|SYY_ROSS1 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|148568307|gb|ABQ90452.1| tyrosyl-tRNA synthetase [Roseiflexus sp. RS-1]
          Length = 424

 Score =  509 bits (1311), Expect = e-142,   Method: Composition-based stats.
 Identities = 162/422 (38%), Positives = 247/422 (58%), Gaps = 15/422 (3%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L  RG +++ S+   LD L ++  VT YIG+D +A SLH GHL  L+ L   Q+ G
Sbjct: 4   ILDELRWRGLLYESSD--GLDELLTRERVTLYIGFDPSADSLHIGHLLPLLTLARFQRWG 61

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H PI+L GGGT +IGDPS + + R ++  +++  N+E IKG  + F+ +  G   AL+LN
Sbjct: 62  HTPIALAGGGTGLIGDPSGKTQERPLLSKEQVAANVEAIKGQLAQFLDFNAGDHSALLLN 121

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  +  +D LR++G   +VN ML+ +SVRSR+  E  +SF EF+YM+LQAYDF  L
Sbjct: 122 NADWLTRLSLMDFLRDVGKHLTVNYMLAKDSVRSRMTSETGISFTEFSYMLLQAYDFAYL 181

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            ++Y C+LQ GGSDQWGNI  GI+L  R    K + L  PL+T A GTK GKT SGA+WL
Sbjct: 182 FEHYGCKLQAGGSDQWGNITAGIELIRRTLGQKAYGLVYPLVTKADGTKFGKTESGAVWL 241

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIATE 305
           + + TSPY F+Q+W N+DDADV  + +  T L   EI+ + ++   +     A++ +A E
Sbjct: 242 DPKRTSPYRFYQFWYNVDDADVGKYLRYFTWLSADEIEELERITASQPERRTAQQRLARE 301

Query: 306 ITTMVHGREEAEKAATAAMECFDMSI----------HSQHMPTISISKDEVS-RGMGLLT 354
           +T MVHG     +A  A+   F  S+            + +P+ ++ + +    G  L+ 
Sbjct: 302 VTRMVHGETALARAEEASQALFGGSLARLSAGDVIDIFEDVPSTTLPRQDFEGDGFPLID 361

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           ++++ G ATS ++ARR ++   I +NN    +   ++ L D      I L  G+K + + 
Sbjct: 362 VLLRCGIATSKSDARRTIEGGGIYVNNIQCPDVGRRLTLNDSIDGQFIVLRKGRKQYHLV 421

Query: 415 HL 416
            +
Sbjct: 422 KV 423


>gi|260433460|ref|ZP_05787431.1| tyrosyl-tRNA synthetase [Silicibacter lacuscaerulensis ITI-1157]
 gi|260417288|gb|EEX10547.1| tyrosyl-tRNA synthetase [Silicibacter lacuscaerulensis ITI-1157]
          Length = 416

 Score =  509 bits (1311), Expect = e-142,   Method: Composition-based stats.
 Identities = 216/412 (52%), Positives = 283/412 (68%), Gaps = 2/412 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KSDF++ + ERGF+   ++ + LD   + GV TAYIGYD TA SLH GHL  +M+L W Q
Sbjct: 6   KSDFIATMIERGFLADCTDYQGLDDALTSGVQTAYIGYDATAQSLHVGHLMNIMVLRWFQ 65

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           K GHKPI+LMGGGT+ +GDPSFR + R ++  ++I  NI  ++ +F  ++ Y    T AL
Sbjct: 66  KLGHKPITLMGGGTTKVGDPSFRSDERPLLGPEQIDANIAGMQKVFDKYLSYDDSDTGAL 125

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           MLNN  WL  + Y+D LR+IG  FSVNRMLSFESV+SRL REQSLSFLEFNYMILQAYDF
Sbjct: 126 MLNNAEWLDDLNYLDFLRDIGRHFSVNRMLSFESVKSRLDREQSLSFLEFNYMILQAYDF 185

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL + Y C LQMGGSDQWGNI+ GIDL  R+   +++ LT+PLLTT+ G KMGK+  GA
Sbjct: 186 LELNRRYGCILQMGGSDQWGNIVNGIDLTRRVLDHEIYGLTTPLLTTSDGRKMGKSQGGA 245

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           IWLN +M SPY FWQ+WRN  DADV  F K  T LP+ E DRM  LQG EINEAK  +A 
Sbjct: 246 IWLNGDMLSPYEFWQFWRNTTDADVGRFLKIFTELPVDECDRMGALQGSEINEAKIRLAN 305

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E+TT++HG E A KA   A E F+       +PT++++ +++  G+ ++ LIVK+G A S
Sbjct: 306 EVTTLLHGAEAAAKAEATAREVFEKGGVGGDLPTLTLTAEDLGDGISVVQLIVKSGLAKS 365

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             EA+R +  N  K++++ +++  L I      S   IKLS GKK H +  L
Sbjct: 366 GKEAKRLIAENGAKLDDAPLTDAGLMIDAAALSSP--IKLSAGKKRHALVQL 415


>gi|253989418|ref|YP_003040774.1| tyrosyl-tRNA synthetase [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|253780868|emb|CAQ84030.1| tyrosyl-tRNA synthetase 1 [Photorhabdus asymbiotica]
          Length = 424

 Score =  509 bits (1311), Expect = e-142,   Method: Composition-based stats.
 Identities = 157/415 (37%), Positives = 229/415 (55%), Gaps = 11/415 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           ++ +  L ERG I Q+++   L    +QG V+ Y G+D TA SLH GHL  L+ L   Q 
Sbjct: 4   NNLIKQLQERGLIAQVTDENALAERLAQGPVSLYCGFDPTADSLHLGHLVPLLCLKRFQL 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++  +  ++E +EKI+   S F+ +  G   A  
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKATERKLNTADTVKEWVEKIRRQVSPFLDFDCGDNSAKT 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYDF 184
            NN  W   +  +  LR+IG  FSVN+M++ E+V+ RL R+   +SF EF+Y +LQ+YDF
Sbjct: 124 ANNYDWFGGMDVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDVGISFTEFSYNLLQSYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           V L + +   LQ+GGSDQWGNI  GIDL  R+   ++F +T PL+T + GTK GKT  GA
Sbjct: 184 VRLNEEHGVELQIGGSDQWGNITSGIDLTRRINQKQVFGMTVPLITKSDGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + +I   +   K  GK    A+ +
Sbjct: 244 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSLEDINALEEADKNSGKAPR-AQYV 302

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTL 355
           +A ++T MVHG E    A       F  ++          +    +   E+ RG  L   
Sbjct: 303 LAEQVTGMVHGEEGLSAAKRITESLFSGTVADLTEADFAQLAQDGMPVIELERGADLQQA 362

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
           +V AG   S  +AR  + SNA+ IN    S  +      +F       L  GKK+
Sbjct: 363 LVNAGLVPSRGQARTMISSNAVAINGEKQSEPEYVFTDSNFLFGRYTLLRRGKKH 417


>gi|238757716|ref|ZP_04618899.1| Tyrosyl-tRNA synthetase [Yersinia aldovae ATCC 35236]
 gi|238703959|gb|EEP96493.1| Tyrosyl-tRNA synthetase [Yersinia aldovae ATCC 35236]
          Length = 428

 Score =  509 bits (1311), Expect = e-142,   Method: Composition-based stats.
 Identities = 157/424 (37%), Positives = 229/424 (54%), Gaps = 21/424 (4%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG ++ Y G+D TA SLH GHL  L+ L   Q 
Sbjct: 8   SNLIKQLQERGLVAQVTDEDALAERLAQGPISLYCGFDPTADSLHLGHLVPLLCLKRFQL 67

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+P++L+GG T +IGDPSF+   R++     + E +EKI+   S F+ +  G   A+ 
Sbjct: 68  AGHRPVALVGGATGMIGDPSFKASERKLNTEDTVNEWVEKIRRQVSPFLDFDCGDNSAIA 127

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYDF 184
            NN  W   +  +  LR+IG  FSVN+M++ E+V+ RL R+   +SF EF+Y +LQAYDF
Sbjct: 128 ANNYDWFGGMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDSGISFTEFSYNLLQAYDF 187

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K +   LQ+GGSDQWGNI  GIDL  RL   +++ LT PL+T A GTK GKT  GA
Sbjct: 188 ACLNKAHGVALQIGGSDQWGNITSGIDLTRRLHQQQVYGLTVPLITKADGTKFGKTEGGA 247

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI   +   K  GK    A+ +
Sbjct: 248 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSLEEINALEDEDKNSGKAPR-AQYV 306

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS-----------QHMPTISISKDEVSRGM 350
           +A  +T MVHG +    A       F   ++              MPT+ +S+D      
Sbjct: 307 LAENVTGMVHGVDGLAAAKRITASLFSGDLNEMTEADFAQLAQDGMPTVELSRD-----A 361

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            L   +V A    S  +AR  + SNA+ +N    ++ +      D        L  GKK+
Sbjct: 362 DLQQALVNAELVPSRGQARTMISSNAVALNGEKQADPEYIFTDADRLFGRYTLLRRGKKH 421

Query: 411 HIIC 414
           + + 
Sbjct: 422 YCLI 425


>gi|238749409|ref|ZP_04610914.1| Tyrosyl-tRNA synthetase [Yersinia rohdei ATCC 43380]
 gi|238712064|gb|EEQ04277.1| Tyrosyl-tRNA synthetase [Yersinia rohdei ATCC 43380]
          Length = 428

 Score =  509 bits (1311), Expect = e-142,   Method: Composition-based stats.
 Identities = 157/419 (37%), Positives = 227/419 (54%), Gaps = 11/419 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG ++ Y G+D TA SLH GHL  L+ L   Q 
Sbjct: 8   SNLIKQLQERGLVAQVTDEDALAERLAQGPISLYCGFDPTADSLHLGHLVPLLCLKRFQL 67

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+P++L+GG T +IGDPSF+   R++     + E +EKI+   S F+ +  G+  A+ 
Sbjct: 68  AGHRPVALVGGATGMIGDPSFKASERKLNTEDTVNEWVEKIRRQVSPFLDFDCGENSAIA 127

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYDF 184
            NN  W   +  +  LR+IG  FSVN+M++ E+V+ RL R+   +SF EF+Y +LQAYDF
Sbjct: 128 ANNYDWFGGMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDSGISFTEFSYNLLQAYDF 187

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K +   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 188 ACLNKAHGVALQIGGSDQWGNITSGIDLTRRLHQQQVFGLTVPLITKADGTKFGKTEGGA 247

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + +I   +   K  GK    A+ +
Sbjct: 248 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEDINALEEEDKNSGKAPR-AQYV 306

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTL 355
           +A  +T MVHG E    A       F   +          +    +   E++R   L   
Sbjct: 307 LAENVTGMVHGAEGLAAAKRITDSLFSGDLKEMTEADFAQLAQDGMPSIELARDADLQQA 366

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +V A    S  +AR  + SNA+ IN    S+ +      D        L  GKK++ + 
Sbjct: 367 LVNAELVPSRGQARTMINSNAVAINGEKQSDPEYIFTDADRLFGRYTLLRRGKKHYCLI 425


>gi|163815452|ref|ZP_02206825.1| hypothetical protein COPEUT_01615 [Coprococcus eutactus ATCC 27759]
 gi|158449089|gb|EDP26084.1| hypothetical protein COPEUT_01615 [Coprococcus eutactus ATCC 27759]
          Length = 406

 Score =  509 bits (1311), Expect = e-142,   Method: Composition-based stats.
 Identities = 171/405 (42%), Positives = 253/405 (62%), Gaps = 7/405 (1%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG I Q ++  E+  L + G    YIG+D TA SLH GH   L L+  LQ  G
Sbjct: 3   IYDELVARGLIAQTTDEDEIRDLVNNGKAVFYIGFDPTADSLHVGHFMALCLMKRLQMAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           +KPI+L+GGGT++IGDPS R + R+MM  + IQ N++  K   S FI +   K  AL++N
Sbjct: 63  NKPIALIGGGTAMIGDPSGRTDMRQMMTKETIQHNVDCFKKQMSKFIDFSEDK--ALLVN 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  + Y+D+LR++G+ FSVN ML  E  + R+  E+ LSFLEFNYMI+Q+YDF  L
Sbjct: 121 NADWLLDLNYVDVLRDVGACFSVNNMLRAECYKQRM--EKGLSFLEFNYMIMQSYDFYAL 178

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            + Y C +Q GG DQW N++ G +L  R      +A+T  LL  + G KMGKT  GA+WL
Sbjct: 179 YQKYGCNMQFGGDDQWSNMLGGTELIRRKLGKDAYAMTITLLLNSEGKKMGKTQKGAVWL 238

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           +   TSP+ F+QYWRN+ DADV+   + LT LP+ EID+M   +G ++N+AK+I+A E+T
Sbjct: 239 DPNKTSPFEFYQYWRNVADADVLKCIRMLTFLPLEEIDKMDNWEGSQLNQAKEILAYELT 298

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTN 366
            +VHG EEA KA  +A   F   + +  MP+++++ D+   G + +++++VK+G  TS N
Sbjct: 299 KLVHGEEEAAKAQESARALFSKGVAA-DMPSVTLAADDFKDGSIDIVSVLVKSGLVTSRN 357

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           E RR ++   + ++   I++ +  I  + FD  G + +  GKKN 
Sbjct: 358 EGRRAVEQGGVAVDGEKITDVQTTIPEEKFDGEG-VVVRRGKKNF 401


>gi|304397706|ref|ZP_07379583.1| tyrosyl-tRNA synthetase [Pantoea sp. aB]
 gi|304354878|gb|EFM19248.1| tyrosyl-tRNA synthetase [Pantoea sp. aB]
          Length = 424

 Score =  508 bits (1310), Expect = e-142,   Method: Composition-based stats.
 Identities = 161/425 (37%), Positives = 233/425 (54%), Gaps = 21/425 (4%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG I Q+++   L    +QG ++ Y G+D TA SLH GHL  L+ L   Q 
Sbjct: 4   SNLIQQLQERGLIAQVTDEAALTEKLAQGPISLYCGFDPTADSLHLGHLVPLLCLKRFQD 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++  S  + E +EKI+   + F+ +  G   A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTSDTVNEWVEKIRQQVAPFLDFDCGSNSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDF 184
            NN  W  S+  +  LR+IG  FSVN+M++ E+V+ RL R +Q +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGSMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDQGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L + +   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  GA
Sbjct: 184 ACLNELHGVSLQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKSDGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T L + EI   +   K  G     A+ +
Sbjct: 244 VWLDAKKTSPYKFYQFWINTADADVYRFLKFFTFLSIEEINALEEEDKNSGTAPR-AQYV 302

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS-----------QHMPTISISKDEVSRGM 350
           +A ++T +VHG      A       F  S+               MPTI++  D+     
Sbjct: 303 LAEQVTRLVHGEAGLTAAKRITASLFSGSVSEMTEADFEQLAQDGMPTIALGADD----- 357

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            L   +VKA    S  +AR  + SNA+ +N    S+ + +    D        L  GKK+
Sbjct: 358 DLQQALVKAELVPSRGQARTMIGSNAVSLNGEKQSDAEYRFSDSDKLFNRYTLLRRGKKH 417

Query: 411 HIICH 415
           + + +
Sbjct: 418 YCLIN 422


>gi|29376289|ref|NP_815443.1| tyrosyl-tRNA synthetase [Enterococcus faecalis V583]
 gi|227518928|ref|ZP_03948977.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0104]
 gi|227553547|ref|ZP_03983596.1| tyrosyl-tRNA synthetase [Enterococcus faecalis HH22]
 gi|229545650|ref|ZP_04434375.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX1322]
 gi|229549841|ref|ZP_04438566.1| tyrosyl-tRNA synthetase [Enterococcus faecalis ATCC 29200]
 gi|255972568|ref|ZP_05423154.1| tyrosyl-tRNA synthetase [Enterococcus faecalis T1]
 gi|255975679|ref|ZP_05426265.1| tyrosyl-tRNA synthetase [Enterococcus faecalis T2]
 gi|256619232|ref|ZP_05476078.1| tyrosyl-tRNA synthetase [Enterococcus faecalis ATCC 4200]
 gi|256762724|ref|ZP_05503304.1| tyrosyl-tRNA synthetase [Enterococcus faecalis T3]
 gi|256853292|ref|ZP_05558662.1| tyrosyl-tRNA synthetase 2 [Enterococcus faecalis T8]
 gi|256959147|ref|ZP_05563318.1| tyrosyl-tRNA synthetase [Enterococcus faecalis DS5]
 gi|256961758|ref|ZP_05565929.1| tyrosyl-tRNA synthetase [Enterococcus faecalis Merz96]
 gi|256964956|ref|ZP_05569127.1| tyrosyl-tRNA synthetase [Enterococcus faecalis HIP11704]
 gi|257079180|ref|ZP_05573541.1| tyrosyl-tRNA synthetase [Enterococcus faecalis JH1]
 gi|257082385|ref|ZP_05576746.1| tyrosyl-tRNA synthetase [Enterococcus faecalis E1Sol]
 gi|257087023|ref|ZP_05581384.1| tyrosyl-tRNA synthetase [Enterococcus faecalis D6]
 gi|257090052|ref|ZP_05584413.1| tyrosyl-tRNA synthetase [Enterococcus faecalis CH188]
 gi|257416258|ref|ZP_05593252.1| tyrosyl-tRNA synthetase [Enterococcus faecalis AR01/DG]
 gi|293383465|ref|ZP_06629378.1| tyrosine--tRNA ligase [Enterococcus faecalis R712]
 gi|293388881|ref|ZP_06633366.1| tyrosine--tRNA ligase [Enterococcus faecalis S613]
 gi|294779395|ref|ZP_06744796.1| tyrosine--tRNA ligase [Enterococcus faecalis PC1.1]
 gi|300860962|ref|ZP_07107049.1| tyrosine--tRNA ligase [Enterococcus faecalis TUSoD Ef11]
 gi|307269549|ref|ZP_07550888.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX4248]
 gi|307273052|ref|ZP_07554298.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0855]
 gi|307275801|ref|ZP_07556940.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX2134]
 gi|307277896|ref|ZP_07558980.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0860]
 gi|307289276|ref|ZP_07569232.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0109]
 gi|307291824|ref|ZP_07571695.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0411]
 gi|312901857|ref|ZP_07761122.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0470]
 gi|312903486|ref|ZP_07762666.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0635]
 gi|312907706|ref|ZP_07766697.1| tyrosyl-tRNA synthetase [Enterococcus faecalis DAPTO 512]
 gi|312910324|ref|ZP_07769171.1| tyrosyl-tRNA synthetase [Enterococcus faecalis DAPTO 516]
 gi|312951668|ref|ZP_07770563.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0102]
 gi|81436930|sp|Q834C7|SYY2_ENTFA RecName: Full=Tyrosyl-tRNA synthetase 2; AltName:
           Full=Tyrosine--tRNA ligase 2; Short=TyrRS 2
 gi|29343752|gb|AAO81513.1| tyrosyl-tRNA synthetase [Enterococcus faecalis V583]
 gi|227073617|gb|EEI11580.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0104]
 gi|227177325|gb|EEI58297.1| tyrosyl-tRNA synthetase [Enterococcus faecalis HH22]
 gi|229305110|gb|EEN71106.1| tyrosyl-tRNA synthetase [Enterococcus faecalis ATCC 29200]
 gi|229309218|gb|EEN75205.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX1322]
 gi|255963586|gb|EET96062.1| tyrosyl-tRNA synthetase [Enterococcus faecalis T1]
 gi|255968551|gb|EET99173.1| tyrosyl-tRNA synthetase [Enterococcus faecalis T2]
 gi|256598759|gb|EEU17935.1| tyrosyl-tRNA synthetase [Enterococcus faecalis ATCC 4200]
 gi|256683975|gb|EEU23670.1| tyrosyl-tRNA synthetase [Enterococcus faecalis T3]
 gi|256711751|gb|EEU26789.1| tyrosyl-tRNA synthetase 2 [Enterococcus faecalis T8]
 gi|256949643|gb|EEU66275.1| tyrosyl-tRNA synthetase [Enterococcus faecalis DS5]
 gi|256952254|gb|EEU68886.1| tyrosyl-tRNA synthetase [Enterococcus faecalis Merz96]
 gi|256955452|gb|EEU72084.1| tyrosyl-tRNA synthetase [Enterococcus faecalis HIP11704]
 gi|256987210|gb|EEU74512.1| tyrosyl-tRNA synthetase [Enterococcus faecalis JH1]
 gi|256990415|gb|EEU77717.1| tyrosyl-tRNA synthetase [Enterococcus faecalis E1Sol]
 gi|256995053|gb|EEU82355.1| tyrosyl-tRNA synthetase [Enterococcus faecalis D6]
 gi|256998864|gb|EEU85384.1| tyrosyl-tRNA synthetase [Enterococcus faecalis CH188]
 gi|257158086|gb|EEU88046.1| tyrosyl-tRNA synthetase [Enterococcus faecalis ARO1/DG]
 gi|291079256|gb|EFE16620.1| tyrosine--tRNA ligase [Enterococcus faecalis R712]
 gi|291081662|gb|EFE18625.1| tyrosine--tRNA ligase [Enterococcus faecalis S613]
 gi|294453524|gb|EFG21925.1| tyrosine--tRNA ligase [Enterococcus faecalis PC1.1]
 gi|295113116|emb|CBL31753.1| tyrosyl-tRNA synthetase [Enterococcus sp. 7L76]
 gi|300850001|gb|EFK77751.1| tyrosine--tRNA ligase [Enterococcus faecalis TUSoD Ef11]
 gi|306497090|gb|EFM66636.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0411]
 gi|306499985|gb|EFM69346.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0109]
 gi|306505293|gb|EFM74479.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0860]
 gi|306507493|gb|EFM76624.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX2134]
 gi|306510037|gb|EFM79061.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0855]
 gi|306514169|gb|EFM82745.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX4248]
 gi|310626734|gb|EFQ10017.1| tyrosyl-tRNA synthetase [Enterococcus faecalis DAPTO 512]
 gi|310630385|gb|EFQ13668.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0102]
 gi|310633362|gb|EFQ16645.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0635]
 gi|311289597|gb|EFQ68153.1| tyrosyl-tRNA synthetase [Enterococcus faecalis DAPTO 516]
 gi|311291050|gb|EFQ69606.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0470]
 gi|315027894|gb|EFT39826.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX2137]
 gi|315029529|gb|EFT41461.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX4000]
 gi|315032002|gb|EFT43934.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0017]
 gi|315037150|gb|EFT49082.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0027]
 gi|315144977|gb|EFT88993.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX2141]
 gi|315147433|gb|EFT91449.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX4244]
 gi|315149853|gb|EFT93869.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0012]
 gi|315152311|gb|EFT96327.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0031]
 gi|315158246|gb|EFU02263.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0312]
 gi|315162444|gb|EFU06461.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0645]
 gi|315163890|gb|EFU07907.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX1302]
 gi|315167302|gb|EFU11319.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX1341]
 gi|315169629|gb|EFU13646.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX1342]
 gi|315576051|gb|EFU88242.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0309B]
 gi|315577818|gb|EFU90009.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0630]
 gi|315580626|gb|EFU92817.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0309A]
 gi|323480896|gb|ADX80335.1| tyrosyl-tRNA synthetase [Enterococcus faecalis 62]
 gi|327535302|gb|AEA94136.1| tyrosine--tRNA ligase [Enterococcus faecalis OG1RF]
 gi|329571864|gb|EGG53542.1| tyrosine--tRNA ligase [Enterococcus faecalis TX1467]
          Length = 420

 Score =  508 bits (1310), Expect = e-142,   Method: Composition-based stats.
 Identities = 157/422 (37%), Positives = 231/422 (54%), Gaps = 17/422 (4%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S F   L  RG ++Q+++   L    ++  V  YIG+D TA SLH GHL  +++L   Q+
Sbjct: 3   SAFFEELKARGLVYQVTDEEALQKQLNEESVKLYIGFDPTADSLHIGHLLPILMLRRFQQ 62

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH PI+L+GGGT +IGDPSF+D  R +     ++   E IKG  S FI +   K  A++
Sbjct: 63  NGHVPIALVGGGTGMIGDPSFKDAERSLNTLDTVKAWSESIKGQLSRFIDFEDEKNPAIL 122

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
            NN  WL  +  ID LR++G  F++N M+S ESV+ R+  E  +S+ EF Y +LQAYDF+
Sbjct: 123 ANNYDWLGELSLIDFLRDVGKNFTINYMMSKESVKRRI--ETGISYTEFAYQLLQAYDFL 180

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           +L +   C LQ+GGSDQWGNI  GI+L  R +  + F LT PL+T A GTK GKT   A+
Sbjct: 181 KLYETEGCLLQLGGSDQWGNITSGIELLRREQEVQGFGLTMPLITKADGTKFGKTEGNAV 240

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIA 303
           WL+ E TSPY F+Q+W N DD DVV F K  T L + EI  + +          A+K +A
Sbjct: 241 WLDAEKTSPYEFYQFWINTDDRDVVKFLKYFTFLTLDEIATIEEEFTANPGQRAAQKALA 300

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLL 353
            E+TT+VHG     +A   +   F   I S          + +PT  +  ++    + L+
Sbjct: 301 KEVTTLVHGEAAYHQAVKISEALFSGDIQSLTAEEIKQGFKDVPTYEVQPED---QLSLV 357

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            L+V +    S  +AR  +++ AI +N     +   ++   D        +  GKK + +
Sbjct: 358 DLLVTSKIEPSKRQAREDVQNGAIYVNGERRQDLAAELTETDKIEGQFTVIRRGKKKYFL 417

Query: 414 CH 415
             
Sbjct: 418 LK 419


>gi|271500224|ref|YP_003333249.1| tyrosyl-tRNA synthetase [Dickeya dadantii Ech586]
 gi|270343779|gb|ACZ76544.1| tyrosyl-tRNA synthetase [Dickeya dadantii Ech586]
          Length = 424

 Score =  508 bits (1310), Expect = e-142,   Method: Composition-based stats.
 Identities = 154/418 (36%), Positives = 227/418 (54%), Gaps = 9/418 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q 
Sbjct: 3   SNLIQQLQERGLVAQVTDEGALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQM 62

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +QE +EKI+   + F+ +  G   A+ 
Sbjct: 63  AGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVEKIRRQVAPFLDFDCGTNSAIA 122

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYDF 184
            NN  W  S+  +  LR+IG  FSVN+M++ E+V+ RL R+   +SF EF+Y +LQ YDF
Sbjct: 123 ANNYDWFGSMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDVGISFTEFSYNLLQGYDF 182

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L   +   L++GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 183 ASLNALHGVELEIGGSDQWGNITSGIDLTRRLHQKQVFGLTVPLITKADGTKFGKTEGGA 242

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE--INEAKKII 302
           +WL+ + TSPY F+Q+W N  DADV  F K  T L +  I+ + +          A+ ++
Sbjct: 243 VWLDPKKTSPYKFYQFWINTSDADVYRFLKFFTFLDIDVINALEEEDKNSGVAPRAQYVL 302

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTLI 356
           A E+T +VHG E    A       F+ ++          +    +   E++ G  L   +
Sbjct: 303 AEEVTRLVHGEEGLTAAKRITQSLFNGNLSDLTEADFAQLAQDGVPMVELATGADLQQAL 362

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           V +    S  +AR+ + SNAI IN     + +      D        L  GKKN+ + 
Sbjct: 363 VDSELQPSRGQARKTIASNAITINGEKQFDPEYTFTDADRLFGRYTLLRRGKKNYCLV 420


>gi|291549525|emb|CBL25787.1| tyrosyl-tRNA synthetase [Ruminococcus torques L2-14]
          Length = 407

 Score =  508 bits (1310), Expect = e-142,   Method: Composition-based stats.
 Identities = 180/406 (44%), Positives = 252/406 (62%), Gaps = 7/406 (1%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
                L  RG I Q+++   +  L + G  T YIG+D TA SLH GH   L L+  LQ+ 
Sbjct: 2   GIYEELQARGLIAQVTDEERIKELVNNGKATFYIGFDPTADSLHVGHFMALCLMKRLQEA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           G+KPI+L+GGGT  IGDPS R + R MM  ++IQ N +  K   S FI +  GK  ALM+
Sbjct: 62  GNKPIALIGGGTGYIGDPSGRTDMRSMMTPEQIQHNCDCFKEQMSRFIDFSDGK--ALMV 119

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  + YID+LRE+G  FSVNRML+ E  + R+  E+ LSFLEFNYMI+QAYDF E
Sbjct: 120 NNADWLLDLNYIDVLREVGPHFSVNRMLTAECYKQRM--EKGLSFLEFNYMIMQAYDFYE 177

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L +NY C L+ GG DQW N++ G +L  R       A+T  LL  + G KMGKT SGA+W
Sbjct: 178 LFQNYGCNLEFGGDDQWSNMLAGTELIRRKLGKDASAMTITLLLNSEGKKMGKTQSGAVW 237

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           L+   TSP++F+QYWRN+ DADV+   + LT LP+ EID+M   +G ++N AK+I+A E+
Sbjct: 238 LDPNKTSPFDFYQYWRNVGDADVLKCIRMLTFLPLEEIDKMDTWEGAQLNTAKEILAYEL 297

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATST 365
           T +VHG EEA+KA  +A   F    ++ +MPT  + + +   G + +L ++VK+G A+S 
Sbjct: 298 TKLVHGEEEAKKAQESARALFSQG-NADNMPTTELEEADFQDGKIDILAVLVKSGQASSR 356

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           ++ARR +    + ++   +++        DFD  G I    GKKN 
Sbjct: 357 SDARRAVTQGGVSVDGEKVTDITTTYAPADFDGEGKIV-KKGKKNF 401


>gi|153855375|ref|ZP_01996524.1| hypothetical protein DORLON_02538 [Dorea longicatena DSM 13814]
 gi|149752195|gb|EDM62126.1| hypothetical protein DORLON_02538 [Dorea longicatena DSM 13814]
          Length = 407

 Score =  508 bits (1310), Expect = e-142,   Method: Composition-based stats.
 Identities = 176/412 (42%), Positives = 255/412 (61%), Gaps = 9/412 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
                L  RG I Q+++   +  L + G  T YIG+D TA SLH GH   L L+  LQ+ 
Sbjct: 2   GIYEELVARGLIAQVTDEDRIKDLVNNGKATFYIGFDPTADSLHVGHFMALCLMKRLQEA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           G+KPI+L+GGGT++IGDPS R + R+MM  + IQ N +  K   S FI +  GK  ALM+
Sbjct: 62  GNKPIALIGGGTAMIGDPSGRTDMRQMMTPETIQHNCDCFKKQMSRFIDFSDGK--ALMV 119

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  + YI++LRE+G+ FSVNRML+ E  + R+  E+ LSFLEFNYMI+QAYDF E
Sbjct: 120 NNADWLMGLNYIEVLREVGAHFSVNRMLTAECYKQRM--EKGLSFLEFNYMIMQAYDFYE 177

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + Y C L+ GG DQW N++ G +L  R       A+T  LL  + G KMGKT SGA+W
Sbjct: 178 LYQKYGCNLEFGGDDQWSNMLAGTELIRRKLGKDASAMTITLLLNSEGKKMGKTQSGAVW 237

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           L+   TSP+ F+QYWRN+ DADV+   + LT LP+ EID+M   +G ++N AK+I+A E+
Sbjct: 238 LDPNKTSPFEFYQYWRNVADADVLKCIRMLTFLPLEEIDKMDSWEGAQLNTAKEILAFEL 297

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATST 365
           T +VHG EEA+KA  AA   F     +  MP   +++++++ G + +LT++VK+G   S 
Sbjct: 298 TKLVHGEEEAQKAQEAARALFSTGAAA-DMPKTELTEEDLTDGNIDILTMLVKSGLTASK 356

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH--IICH 415
           +EARR ++   + ++   +++       +     G + L  GKKN   ++  
Sbjct: 357 SEARRAVQQGGVSVDGEKVTDVFQTFAGEALSGEG-VVLKKGKKNFRKVLVK 407


>gi|206580905|ref|YP_002238204.1| tyrosyl-tRNA synthetase [Klebsiella pneumoniae 342]
 gi|254783610|sp|B5XWP0|SYY_KLEP3 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|206569963|gb|ACI11739.1| tyrosyl-tRNA synthetase [Klebsiella pneumoniae 342]
          Length = 426

 Score =  508 bits (1310), Expect = e-142,   Method: Composition-based stats.
 Identities = 156/420 (37%), Positives = 235/420 (55%), Gaps = 11/420 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 4   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++     +QE ++KI+   + F+ +  G   A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTEDTVQEWVDKIRKQVAPFLDFDCGDNSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDF 184
            NN  W  S+  +  LR+IG  FSVN+M++ E+V+ RL R +Q +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGSMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDQGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K +   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 184 ACLNKLHGVALQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + M+EI   +   K  GK    A+ +
Sbjct: 244 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMDMAEINALEEEDKNSGKAPR-AQYV 302

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTL 355
           +A ++T +VHG E  E A       F+ ++        + +    +   E+ +G  L+  
Sbjct: 303 LAEQVTRLVHGEEGLEAAKRITESLFNGNLSDLSESDFEQLAQDGMPMVELEKGTDLMQA 362

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +V++    S  +AR+ + +N + +N     +    +   D   +    L  GKKN  +  
Sbjct: 363 LVESELQPSRGQARKAIAANGVTVNGIKQPDPDYVLNENDRYFSNYTLLRRGKKNWCLIK 422


>gi|118443768|ref|YP_877447.1| tyrosyl-tRNA synthetase [Clostridium novyi NT]
 gi|118134224|gb|ABK61268.1| tyrosyl-tRNA synthetase [Clostridium novyi NT]
          Length = 408

 Score =  508 bits (1309), Expect = e-142,   Method: Composition-based stats.
 Identities = 176/410 (42%), Positives = 260/410 (63%), Gaps = 7/410 (1%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L ERG+I Q ++  E+  L  +  +T YIG+D TA SLH GH   +M +  +QK 
Sbjct: 5   NVFDTLMERGYIKQTTHEEEIRELLGKEKITFYIGFDPTADSLHVGHFIAMMFMSHMQKA 64

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI+L+GGGT++IGDPS + + R+M+  ++IQ N+  IK   S FI +   K  A+++
Sbjct: 65  GHRPIALVGGGTAMIGDPSGKTDMRKMLSEEQIQANVAGIKKQLSRFIDFSDDK--AILV 122

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL   KY++ +REIG  FSVN+ML+ E  + RL  E+ LSFLEFNYM++QAYDF+E
Sbjct: 123 NNADWLLGAKYVEFIREIGVHFSVNKMLTAECFKQRL--EKGLSFLEFNYMLMQAYDFLE 180

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + Y C +++GG DQW N+I G+DL  R +    FA+T  LLT + G KMGKT+ GA+W
Sbjct: 181 LNRKYGCVMELGGDDQWSNMIAGMDLIRRKERKPAFAMTCSLLTNSEGQKMGKTVGGALW 240

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           L+ E TSPY+F+QYWRN+ DADV      LT +PM E+ R++ L+G  INEAKK++A E+
Sbjct: 241 LDAEKTSPYDFYQYWRNVADADVEKCLSLLTFVPMDEVKRLSSLEGAAINEAKKVLAFEV 300

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
           T +VHG EEA+KA TAA   F+      ++PTI + KD +  G  LL +++      S  
Sbjct: 301 TKLVHGEEEAKKAQTAAEALFNGGADMSNVPTIEVEKDAI--GTSLLEILLNGKAIPSKK 358

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           E RR ++   + +N+  +++    ++  D    G+  +  GKK +    +
Sbjct: 359 EGRRLIEQGGLYMNDENVTDPNTVLQESDL-KDGSTLIKKGKKKYYRIVV 407


>gi|257085018|ref|ZP_05579379.1| tyrosyl-tRNA synthetase [Enterococcus faecalis Fly1]
 gi|257422395|ref|ZP_05599385.1| tyrosyl-tRNA synthetase [Enterococcus faecalis X98]
 gi|256993048|gb|EEU80350.1| tyrosyl-tRNA synthetase [Enterococcus faecalis Fly1]
 gi|257164219|gb|EEU94179.1| tyrosyl-tRNA synthetase [Enterococcus faecalis X98]
 gi|315156112|gb|EFU00129.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0043]
 gi|315172203|gb|EFU16220.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX1346]
          Length = 420

 Score =  508 bits (1309), Expect = e-142,   Method: Composition-based stats.
 Identities = 157/422 (37%), Positives = 231/422 (54%), Gaps = 17/422 (4%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S F   L  RG ++Q+++   L    ++  V  YIG+D TA SLH GHL  +++L   Q+
Sbjct: 3   SAFFEELKARGLVYQVTDEEALQKQLNEESVKLYIGFDPTADSLHIGHLLPILMLRRFQQ 62

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH PI+L+GGGT +IGDPSF+D  R +     ++   E IKG  S FI +   K  A++
Sbjct: 63  NGHVPIALVGGGTGMIGDPSFKDAERSLNTLDTVKAWSESIKGQLSRFIDFEDEKNPAIL 122

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
            NN  WL  +  ID LR++G  F++N M+S ESV+ R+  E  +S+ EF Y +LQAYDF+
Sbjct: 123 ANNYDWLGELSLIDFLRDVGKNFTINYMMSKESVKRRI--ETGISYTEFAYQLLQAYDFL 180

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           +L +   C LQ+GGSDQWGNI  GI+L  R +  + F LT PL+T A GTK GKT   A+
Sbjct: 181 KLYETEGCLLQLGGSDQWGNITSGIELLRREQEVQGFGLTMPLITKADGTKFGKTEGNAV 240

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIA 303
           WL+ E TSPY F+Q+W N DD DVV F K  T L + EI  + +          A+K +A
Sbjct: 241 WLDAEKTSPYEFYQFWINTDDRDVVKFLKYFTFLTLDEIATIEEEFTANPGQRAAQKALA 300

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLL 353
            E+TT+VHG     +A   +   F   I S          + +PT  +  ++    + L+
Sbjct: 301 KEVTTLVHGEAAYHQAVKISEALFSGDIQSLTAEEIKQGFKDVPTYEVQPED---QLSLV 357

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            L+V +    S  +AR  +++ AI +N     +   ++   D        +  GKK + +
Sbjct: 358 DLLVTSKIEPSKRQAREDVQNGAIYVNGERKQDLAAELTETDKIEGQFTVIRRGKKKYFL 417

Query: 414 CH 415
             
Sbjct: 418 LK 419


>gi|325962889|ref|YP_004240795.1| tyrosyl-tRNA synthetase [Arthrobacter phenanthrenivorans Sphe3]
 gi|323468976|gb|ADX72661.1| tyrosyl-tRNA synthetase [Arthrobacter phenanthrenivorans Sphe3]
          Length = 438

 Score =  508 bits (1309), Expect = e-142,   Method: Composition-based stats.
 Identities = 151/428 (35%), Positives = 231/428 (53%), Gaps = 20/428 (4%)

Query: 2   PAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
           P F ++    L  RG +H  ++  EL+ L + G VT Y G+D TA SLH G+L QL+++ 
Sbjct: 15  PTF-ANIWQELKWRGLVHVSTDEAELEKLLAGGPVTYYCGFDPTAPSLHLGNLVQLLVMR 73

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKT 121
            LQ  GHKP+ L+GG T +IGDP      R +     + E +  ++     F+ +  G  
Sbjct: 74  RLQLAGHKPLGLVGGSTGMIGDPRP-TAERTLNTKDTVAEWVGYLQAQVRRFLSF-EGDN 131

Query: 122 DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA 181
            A M+NN  W   +  ID LR++G  F V  ML  ++V SRL  ++ +S+ EF+Y ILQ 
Sbjct: 132 AARMVNNLDWTAPLSAIDFLRDVGKHFRVGTMLRKDAVASRLNSDEGISYTEFSYQILQG 191

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            D+++L ++Y C LQ GGSDQWGN+  G +L  +++   + AL +PL+T A GTK GK+ 
Sbjct: 192 MDYLQLYRDYGCMLQTGGSDQWGNLTSGTELIRKVEGKSVHALGTPLITNADGTKFGKSE 251

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAK 299
             AIWL+  M SPY F+Q+W N  DADVV+  K  T L  +EID +A    +     E +
Sbjct: 252 GNAIWLDAGMCSPYAFYQFWLNTADADVVNRLKVFTFLTRAEIDELAAAVAERPFAREGQ 311

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMS-----------IHSQHMPTISISKDEVSR 348
           + +A E+T++VHG E  EK   A+   F                +  +P+ ++  DE   
Sbjct: 312 RKLAYEVTSLVHGVEATEKVIAASAALFGNGDLTALDKTTLQAATSELPSATVQVDE--- 368

Query: 349 GMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGK 408
            MG++ L+V +G + S + ARR +      +NN  +S+ +  I   +      + L  GK
Sbjct: 369 -MGIVDLLVASGLSESKSAARRTVGEGGAYVNNEKVSDPEAVISESELLHGQYLLLRRGK 427

Query: 409 KNHIICHL 416
           KN     +
Sbjct: 428 KNLATVEV 435


>gi|291561959|emb|CBL40767.1| tyrosyl-tRNA synthetase [butyrate-producing bacterium SS3/4]
          Length = 407

 Score =  508 bits (1309), Expect = e-142,   Method: Composition-based stats.
 Identities = 175/411 (42%), Positives = 252/411 (61%), Gaps = 7/411 (1%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
                L  RG I Q++N  E+  + ++G    YIG+D TA SLH GH   L L+  LQ  
Sbjct: 2   GVYEELQARGLIAQVTNEEEIRKMVNEGRAVFYIGFDPTADSLHVGHFMALCLMKRLQMA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           G+KPI+L+GGGT ++GDPS R + R MM  + IQ N +  K   S FI +  GK  A+M+
Sbjct: 62  GNKPIALIGGGTGMVGDPSGRTDMRTMMTVETIQHNCDCFKKQMSRFIDFSEGK--AMMV 119

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL ++ YID LREIG  FSVN ML  E  + R+  E+ LSFLEFNYM++Q+YDF E
Sbjct: 120 NNAEWLMNLNYIDFLREIGPHFSVNNMLRAECYKQRM--EKGLSFLEFNYMLMQSYDFYE 177

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + Y C +Q GG DQW N++ G +L  R       A+T  LL  + G KMGKT SGA+W
Sbjct: 178 LFQRYGCNMQFGGDDQWSNMLGGTELIRRKLGKDAHAMTITLLLNSEGKKMGKTQSGAVW 237

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           L+   T+P+ F+QYWRN+ DADV+   + LT LP+ +ID M K +G ++N+AK+I+A E+
Sbjct: 238 LDPNKTTPFEFYQYWRNVGDADVLKCLRMLTFLPLEQIDEMDKWEGSQLNQAKEILAYEL 297

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATST 365
           T++VHG EEA+KA  +A   F     ++ MPT  +S  ++S G + LL+++ K+G   S 
Sbjct: 298 TSLVHGEEEAKKAQESARALFAGGAAAE-MPTAELSDADLSDGSIDLLSIVQKSGLCASR 356

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +EARR+++   + ++  I+ + K     +     G I +  GKKN     +
Sbjct: 357 SEARRNVEQGGVSVDGEIVKDIKAVYTKEQLSGEG-IVVKRGKKNFRRVVV 406


>gi|290475488|ref|YP_003468376.1| tyrosine tRNA synthetase [Xenorhabdus bovienii SS-2004]
 gi|289174809|emb|CBJ81610.1| tyrosine tRNA synthetase [Xenorhabdus bovienii SS-2004]
          Length = 428

 Score =  508 bits (1309), Expect = e-142,   Method: Composition-based stats.
 Identities = 155/422 (36%), Positives = 233/422 (55%), Gaps = 11/422 (2%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           F ++ +  L +RG + Q+++   L    +QG V+ Y G+D TA SLH GHL  L+ L   
Sbjct: 6   FSNNLIKQLQDRGLVAQVTDEEALAERLAQGPVSLYCGFDPTADSLHLGHLVPLLCLKRF 65

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q TGHKPI+L+GG T +IGDPSF+   R++   + ++E +EKI+   S F+ +  G+  A
Sbjct: 66  QLTGHKPIALVGGATGLIGDPSFKATERKLNTEETVKEWVEKIRKQVSPFLDFDCGENRA 125

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAY 182
            + NN  W   +  +  LR+IG  FSVN+M++ E+V+ RL R+   +S+ EF+Y +LQ+Y
Sbjct: 126 EIANNYEWFGEMDVLTFLRDIGKHFSVNQMINREAVKQRLHRDDVGISYTEFSYNLLQSY 185

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DF  L   Y   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  
Sbjct: 186 DFANLNGKYGVELQIGGSDQWGNITSGIDLTRRLHQKQVFGLTVPLITKSDGTKFGKTEG 245

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAK 299
           GA+WL+ + TSPY F+Q+W +  DAD   F K  T + + EI   +   K  GK    A+
Sbjct: 246 GAVWLDPKKTSPYKFYQFWISTADADAYRFLKFFTFMSIEEINALEEEDKNSGKAPR-AQ 304

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDM---SIHSQHMPTIS---ISKDEVSRGMGLL 353
            ++A ++T MVHG      A       F      +  + +  ++   +   E+ +   L 
Sbjct: 305 YVLAEQVTGMVHGEAGLAAAKRITNSLFSGIVADLTEEDLAQLAQDGMPAIELEKDADLQ 364

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
             +V AG   S  +AR  + SNA+ IN    S+ +      D        L  GKK++ +
Sbjct: 365 QALVTAGLVPSRGQARTMIGSNAVSINGEKQSDAEYTFADSDRLFERYTLLRRGKKHYCL 424

Query: 414 CH 415
            +
Sbjct: 425 IN 426


>gi|126739432|ref|ZP_01755125.1| tyrosyl-tRNA synthetase [Roseobacter sp. SK209-2-6]
 gi|126719532|gb|EBA16241.1| tyrosyl-tRNA synthetase [Roseobacter sp. SK209-2-6]
          Length = 418

 Score =  508 bits (1309), Expect = e-142,   Method: Composition-based stats.
 Identities = 213/414 (51%), Positives = 278/414 (67%), Gaps = 3/414 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KSDF++++ ERGF+   ++ + LD    QGV  AYIG+D TA SLH G L Q+M+L W Q
Sbjct: 6   KSDFVAVMMERGFLADCTDYQGLDEALMQGVKPAYIGFDATAKSLHVGSLIQIMMLRWFQ 65

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG-KTDA 123
           KTGH+PI+LMGGGT+ +GDPSFR + R ++    I  NI  IK +F+++I Y T     A
Sbjct: 66  KTGHQPITLMGGGTTKVGDPSFRADERPLLDEAAINANIAGIKKVFAAYIDYDTDAPNKA 125

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           LMLNN  WL  + Y++ LR+IG  FSVNRMLSFESV+SRL REQSLSFLEFNYMILQAYD
Sbjct: 126 LMLNNAEWLDDLNYLEFLRDIGRHFSVNRMLSFESVKSRLDREQSLSFLEFNYMILQAYD 185

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+EL + Y C LQMGGSDQWGNI+ GIDL  R+    +F LTSPLLTT+ G KMGK+  G
Sbjct: 186 FLELNRRYGCILQMGGSDQWGNIVNGIDLTRRVLDNSIFGLTSPLLTTSDGKKMGKSQDG 245

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIA 303
           A+WLN +M SPY FWQ+WRN  DADV  F K  T LP+ E +R+  L G EIN+AK ++A
Sbjct: 246 AVWLNPDMRSPYEFWQFWRNTTDADVGRFLKLYTELPIDECERLGALAGSEINDAKIVLA 305

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
            E+T + HG E A  A   + E F+       +PT+S+S  ++  G+ ++ LIVK+G A 
Sbjct: 306 NEVTKLCHGAEAALAAEATSREVFEKGGVGDDLPTLSLSPADLGDGISIVQLIVKSGLAK 365

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           S  EA+R +  N  KI++  +++  L +      S   IKLS GKK H +  L 
Sbjct: 366 SGKEAKRLISENGAKIDDQPLTDAGLMLDAGALSSP--IKLSAGKKRHALVQLT 417


>gi|238753615|ref|ZP_04614977.1| Tyrosyl-tRNA synthetase [Yersinia ruckeri ATCC 29473]
 gi|238708167|gb|EEQ00523.1| Tyrosyl-tRNA synthetase [Yersinia ruckeri ATCC 29473]
          Length = 428

 Score =  508 bits (1309), Expect = e-142,   Method: Composition-based stats.
 Identities = 157/424 (37%), Positives = 231/424 (54%), Gaps = 21/424 (4%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG ++ Y G+D TA SLH GHL  L+ L   Q 
Sbjct: 8   SNLIKQLQERGLVAQVTDEDALAERLAQGPISLYCGFDPTADSLHLGHLVPLLCLKRFQL 67

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+P++L+GG T +IGDPSF+   R++  +  + E +EKI+   S F+ +      A+ 
Sbjct: 68  QGHRPVALVGGATGLIGDPSFKATERKLNTADTVNEWVEKIRHQVSPFLDFDCRNNSAIT 127

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYDF 184
            NN  W  ++  +  LR+IG  FSVN+M++ E+V+ RL R+   +SF EF+Y +LQ YDF
Sbjct: 128 ANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDSGISFTEFSYNLLQGYDF 187

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K +   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 188 ACLNKEHGVELQIGGSDQWGNITSGIDLTRRLHQQQVFGLTVPLITKADGTKFGKTEGGA 247

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + +I   +   +  GK    A+ +
Sbjct: 248 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSLEDINALEEEDQNSGKAPR-AQYV 306

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS-----------QHMPTISISKDEVSRGM 350
           +A ++T MVHG      A       F   +H              MPTI +++D      
Sbjct: 307 LAEKVTGMVHGEAGLAAAKRITDSLFSGHLHEMTETDFAQLAQDGMPTIELTRD-----A 361

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            L   +V A  A S  +AR+ + SNA+ IN    ++ +      D        L  GKK+
Sbjct: 362 DLQQALVNAELAPSRGQARKLIASNAVTINGEKQADPEYSFTDADRLFGRFSLLRRGKKH 421

Query: 411 HIIC 414
           + + 
Sbjct: 422 YCLV 425


>gi|84684873|ref|ZP_01012773.1| tyrosyl-tRNA synthetase [Maritimibacter alkaliphilus HTCC2654]
 gi|84667208|gb|EAQ13678.1| tyrosyl-tRNA synthetase [Rhodobacterales bacterium HTCC2654]
          Length = 421

 Score =  508 bits (1308), Expect = e-142,   Method: Composition-based stats.
 Identities = 215/412 (52%), Positives = 288/412 (69%), Gaps = 2/412 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KSDF+ ++ ERG++   ++ + LD   + GVVTAYIGYD TA SLH GHL  +M+L WLQ
Sbjct: 11  KSDFMRVMIERGYLADCTDYQALDEALTNGVVTAYIGYDATAKSLHVGHLLNIMMLRWLQ 70

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           KTGHKPI+LMGGGT+ +GDPSFR + R ++  ++I  NI+ +K +F+ ++ YG G++DAL
Sbjct: 71  KTGHKPITLMGGGTTKVGDPSFRSDERPLLGPEQIDANIDGMKQVFAKYLSYGDGESDAL 130

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           MLNN  WL  + Y++ LR+IG  FSVNRMLSFESV+SRL REQSLSFLEFNYMILQAYDF
Sbjct: 131 MLNNAEWLDGLNYLEFLRDIGRHFSVNRMLSFESVKSRLDREQSLSFLEFNYMILQAYDF 190

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL + Y C LQMGGSDQWGNI+ GIDL  R+   +++ LTSPLLTT+ G KMGK+  GA
Sbjct: 191 LELNRRYGCTLQMGGSDQWGNIVNGIDLTRRVLDHEIYGLTSPLLTTSDGKKMGKSQGGA 250

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WLN +M SPY FWQ+WRN  DADV  F K  T L + E +R+A L G  INEAK ++A 
Sbjct: 251 MWLNADMLSPYEFWQFWRNTTDADVGRFLKLYTELSVEECERLAALPGNRINEAKIVLAN 310

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E+TT+ HG E A  A   A E F+       +PT++++ DE+  G+ +  LI ++G A +
Sbjct: 311 EVTTLCHGAEAAAAAEATAREVFEKGGAGDDLPTLTLTADEIGDGISITQLITRSGLAKT 370

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             EA+R +     K+N++ +++  L I   D D+   IKLS GKK H +  L
Sbjct: 371 GKEAKRLIADKGAKLNDADVTDAGLMITAADLDAP--IKLSAGKKRHALVTL 420


>gi|210611476|ref|ZP_03288912.1| hypothetical protein CLONEX_01102 [Clostridium nexile DSM 1787]
 gi|210151976|gb|EEA82983.1| hypothetical protein CLONEX_01102 [Clostridium nexile DSM 1787]
          Length = 407

 Score =  508 bits (1308), Expect = e-142,   Method: Composition-based stats.
 Identities = 179/405 (44%), Positives = 251/405 (61%), Gaps = 7/405 (1%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG I Q+++   +  L ++G  T YIG+D TA SLH GH   L L+  LQ  G
Sbjct: 3   IYDELKARGLIAQVTDEELISNLINEGKATFYIGFDPTADSLHVGHFMALCLMKRLQMAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           +KPI+L+GGGT  IGDPS R + R MM  ++IQ N +  K   S FI +  GK  A+M+N
Sbjct: 63  NKPIALIGGGTGYIGDPSGRTDMRSMMTPEQIQHNCDCFKEQMSKFIDFSEGK--AMMVN 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  + YI+LLRE+G+ FSVNRML+ E  + R+  E+ LSFLEFNYMI+QAYDF  L
Sbjct: 121 NADWLLDLNYIELLREVGAHFSVNRMLTAECYKQRM--EKGLSFLEFNYMIMQAYDFYAL 178

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            + Y C LQ GG DQW N++ G +L  R       A+T  LL  + G KMGKT SGA+WL
Sbjct: 179 YQKYGCNLQFGGDDQWSNMLAGTELIRRKLGKDASAMTITLLLNSEGKKMGKTQSGAVWL 238

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           +   TSP+ F+QYWRN+ DADV+   + LT LP+ EID+M   +G ++N+AK+I+A E+T
Sbjct: 239 DPNKTSPFEFYQYWRNVADADVLKCIRMLTFLPLEEIDKMDDWEGSQLNQAKEILAFELT 298

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTN 366
            +VHG EEA KA  +A   F     + +MPT  ++++++  G + +LT++VK+G   S +
Sbjct: 299 KLVHGEEEATKAQESARALFSSGAAA-NMPTAELTEEDLVNGSIDILTMLVKSGLVPSKS 357

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           EARR +    + ++   +++ K       F   G I L  GKKN 
Sbjct: 358 EARRAVDQGGVAVDGDKVTDIKAVFAKDVFAGEG-IVLRRGKKNF 401


>gi|319948165|ref|ZP_08022325.1| tyrosyl-tRNA synthetase [Dietzia cinnamea P4]
 gi|319438149|gb|EFV93109.1| tyrosyl-tRNA synthetase [Dietzia cinnamea P4]
          Length = 426

 Score =  508 bits (1308), Expect = e-142,   Method: Composition-based stats.
 Identities = 155/429 (36%), Positives = 224/429 (52%), Gaps = 15/429 (3%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M    ++ L  L  RG I Q ++   L      G V+ Y G+D T  SLHAGHL  L+ L
Sbjct: 1   MTVVTNNILDELQWRGLIAQSTDLDALRTHLDAGTVSLYCGFDPTGPSLHAGHLIPLLTL 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GH+PI L GG T +IGDP    E R M  S  + E  E+I G    F+    G 
Sbjct: 61  RRFQLAGHRPIVLAGGATGMIGDPREVGE-RVMNTSDTVAEWTERIAGQLELFVDLTEGP 119

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           T A ++NN  W   +  I+ LR++G  FS+N ML  ++V+ RL+  + +SF EF+YM+LQ
Sbjct: 120 TGARVVNNMQWTGHMTVIEFLRDVGKHFSLNTMLGRDTVKRRLE-GEGISFTEFSYMLLQ 178

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           A DF++L +N  C LQ+GGSDQWGNII G+DL  R+    + A+T PL+T+A G K GK+
Sbjct: 179 ANDFLQLRRNMGCTLQLGGSDQWGNIIGGVDLNRRVDGETVHAMTVPLVTSADGKKFGKS 238

Query: 241 -LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINE 297
              G++WL+  MTSPY ++QY+ N  DADVV + +  + L   EID +  L      +  
Sbjct: 239 TGGGSLWLDPSMTSPYTWYQYFLNTADADVVRYLRWFSFLGREEIDELEALTRDKPHLRA 298

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-------- 349
           A+K +A E+TT+VHG    E    AA   F        +   +++      G        
Sbjct: 299 AQKRLAEEMTTLVHGVAATESVQAAAQALFGRGEL-NGLDEATLAAALEDAGAVEIAPGS 357

Query: 350 -MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGK 408
              ++ L+V +G + S   ARR +      +NN  +S+ +      D    G + L  GK
Sbjct: 358 PTTIVDLLVASGLSESKGAARRAVGEGGAYVNNERVSDPEWTPSSGDLLHGGWLVLRRGK 417

Query: 409 KNHIICHLC 417
           KN     + 
Sbjct: 418 KNFAGVRIS 426


>gi|160938370|ref|ZP_02085725.1| hypothetical protein CLOBOL_03268 [Clostridium bolteae ATCC
           BAA-613]
 gi|158438743|gb|EDP16500.1| hypothetical protein CLOBOL_03268 [Clostridium bolteae ATCC
           BAA-613]
          Length = 408

 Score =  508 bits (1308), Expect = e-142,   Method: Composition-based stats.
 Identities = 174/405 (42%), Positives = 252/405 (62%), Gaps = 6/405 (1%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG I Q++N  E+  + ++G    YIG+D TA SLH GH   L L+  LQ  G
Sbjct: 3   IYEELVARGLIAQVTNEEEIKKMVNEGKAVFYIGFDPTADSLHVGHFMALCLMKRLQMAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           +KPI+L+GGGT +IGDPS R + R MM  + IQ N +  K   S FI +  GK  A+M+N
Sbjct: 63  NKPIALIGGGTGMIGDPSGRSDMRTMMTPEIIQHNCDCFKKQMSRFIDFSEGK--AMMVN 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  + YI+ LRE+G  FSVN ML  E  + R+  E+ LSFLEFNYMI+Q+YDF EL
Sbjct: 121 NAEWLMGLNYIEFLREVGPHFSVNNMLRAECYKQRM--EKGLSFLEFNYMIMQSYDFYEL 178

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            K Y C +Q GG DQW N++ G +L  R       A+T  LL  + G KMGKT SGA+WL
Sbjct: 179 FKRYGCNMQFGGDDQWSNMLGGTELIRRKLGKDAHAMTITLLLNSEGKKMGKTQSGAVWL 238

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           + E TSP++F+QYWRN+ D+DV+   + LT LP+ +ID M + +G  +N+AK+I+A E+T
Sbjct: 239 DPEKTSPFDFYQYWRNVGDSDVLKCLRMLTFLPLEQIDEMDQWEGSRLNQAKEILAFELT 298

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTN 366
            +VHG EEA KA   A   F     +++MPT  +S+++ + G + +L+++ K+G A S +
Sbjct: 299 KLVHGEEEAAKAQEGARALFAAGASTENMPTFELSEEDFTDGTIDILSILNKSGLAASRS 358

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           EARR+++   + ++ + + + K     + F   G + +  GKKN 
Sbjct: 359 EARRNVEQGGVSVDGNPVKDIKAVFSREQFAGDG-VVVKRGKKNF 402


>gi|257419462|ref|ZP_05596456.1| tyrosyl-tRNA synthetase [Enterococcus faecalis T11]
 gi|257161290|gb|EEU91250.1| tyrosyl-tRNA synthetase [Enterococcus faecalis T11]
          Length = 420

 Score =  508 bits (1308), Expect = e-142,   Method: Composition-based stats.
 Identities = 157/422 (37%), Positives = 232/422 (54%), Gaps = 17/422 (4%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S F   L  RG ++Q+++   L    ++  V  YIG+D TA SLH GHL  +++L   Q+
Sbjct: 3   SAFFEELKARGLVYQVTDEEALQKQLNEESVKLYIGFDPTADSLHIGHLLPILMLRRFQQ 62

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH PI+L+GGGT +IGDPSF+D  R +     ++   E IKG  S FI +   K  A++
Sbjct: 63  NGHVPIALVGGGTGMIGDPSFKDAERSLNTLDTVKAWSESIKGQLSRFIDFEDEKNPAIL 122

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
            NN  WL  +  ID LR++G  F++N M+S ESV+ R+  E  +S+ EF Y +LQAYDF+
Sbjct: 123 ANNYDWLGGLSLIDFLRDVGKNFTINYMMSKESVKRRI--ETGISYTEFAYQLLQAYDFL 180

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           +L +   C LQ+GGSDQWGNI  GI+L  R +  + F LT PL+T A GTK GKT   A+
Sbjct: 181 KLYETEGCLLQLGGSDQWGNITSGIELLRREQEVQGFGLTMPLITKADGTKFGKTEGNAV 240

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIA 303
           WL+ E TSPY F+Q+W N DD DVV F K  T L + EI  + +          A+K +A
Sbjct: 241 WLDAEKTSPYEFYQFWINTDDRDVVKFLKYFTFLTLDEIATIEEEFTANPGQRAAQKALA 300

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLL 353
            E+TT+VHG+    +A   +   F   I S          + +PT  +  ++    + L+
Sbjct: 301 KEVTTLVHGKAAYHQAVKISEALFSGDIQSLTAEEIKQGFKDVPTYEVQPED---QLSLV 357

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            L+V +    S  +AR  +++ AI +N     +   ++   D        +  GKK + +
Sbjct: 358 DLLVTSKIEPSKRQAREDVQNGAIYVNGERRQDLAAELTETDKIEGQFTVIRRGKKKYFL 417

Query: 414 CH 415
             
Sbjct: 418 LK 419


>gi|226330314|ref|ZP_03805832.1| hypothetical protein PROPEN_04228 [Proteus penneri ATCC 35198]
 gi|225201109|gb|EEG83463.1| hypothetical protein PROPEN_04228 [Proteus penneri ATCC 35198]
          Length = 428

 Score =  507 bits (1307), Expect = e-142,   Method: Composition-based stats.
 Identities = 154/425 (36%), Positives = 231/425 (54%), Gaps = 11/425 (2%)

Query: 1   MPAFKS--DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLM 58
           M +  S  + ++ L ERG I Q+++   L     QG +  Y G+D TA SLH GHL  L+
Sbjct: 1   MESLMSSKNLITQLQERGLIAQVTDEAALVERLEQGPIALYCGFDPTADSLHLGHLVPLL 60

Query: 59  LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT 118
            L   Q  GHKP++L+GG T +IGDPSF+   R++     + E +EKI+   S F+ + +
Sbjct: 61  CLKRFQLAGHKPVALVGGATGLIGDPSFKATERKLNTQDTVHEWVEKIRKQVSPFLDFDS 120

Query: 119 GKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYM 177
           G+  A + NN  W   +  +  LR+IG  FSVN+M++ E+V+ RL R+   +SF EF Y 
Sbjct: 121 GENSAELANNYDWFGQMDVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDVGISFTEFAYN 180

Query: 178 ILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
           +LQAYDF  L  +    LQ+GGSDQWGNI  GIDL  R    ++F +T PL+T + GTK 
Sbjct: 181 LLQAYDFASLNTHLGVELQIGGSDQWGNITSGIDLTRRFNQKQVFGMTVPLITKSDGTKF 240

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEI 295
           GKT  GA+WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+ + +      + 
Sbjct: 241 GKTEGGAVWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINALEEEDKNSGQA 300

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRG 349
             A++++A  +T +VHG +    A       F  +I        + +    +   E+ +G
Sbjct: 301 PRAQRVLAELVTGLVHGEDGLIAAKRITESLFSGAIADLTQADLEQLAQDGMPTIELEKG 360

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
             L   +V A    S  +AR  + SNA+ IN     N +   + +DF       L  GKK
Sbjct: 361 SDLQQALVNAELVPSRGQARTMIGSNAVSINGEKQDNPEYIFEEKDFLFGHYSILRRGKK 420

Query: 410 NHIIC 414
           ++ + 
Sbjct: 421 HYCLV 425


>gi|238919992|ref|YP_002933507.1| tyrosyl-tRNA synthetase [Edwardsiella ictaluri 93-146]
 gi|238869561|gb|ACR69272.1| tyrosyl-tRNA synthetase, putative [Edwardsiella ictaluri 93-146]
          Length = 428

 Score =  507 bits (1307), Expect = e-142,   Method: Composition-based stats.
 Identities = 153/419 (36%), Positives = 229/419 (54%), Gaps = 11/419 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 8   SNLIKQLQERGLVAQVTDEEALAERLAQGSIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 67

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +Q  ++KI+   + F+ +  G   A+ 
Sbjct: 68  AGHKPVALVGGATGLIGDPSFKATERKLNTEETVQGWVDKIRHQVAPFLDFDCGSNSAIA 127

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYDF 184
            NN  W   +  +  LR+IG  FSVN+M++ E+V+ RL R+   +SF EF+Y +LQ YDF
Sbjct: 128 ANNYDWFGGMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDVGISFTEFSYNLLQGYDF 187

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L + +   LQ+GGSDQWGNI  GIDL  R+   +++ LT PL+T A GTK GKT  GA
Sbjct: 188 ASLNRMHGVELQIGGSDQWGNITSGIDLTRRMNQQQVWGLTVPLITKADGTKFGKTEGGA 247

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI   +   K  GK    A+ +
Sbjct: 248 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMDIEEINALEEEDKTSGKAPR-AQYV 306

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTL 355
           +A  +T +VHG    E A       F  S+          +    +   E+ +G  L   
Sbjct: 307 LAEAVTRLVHGEAGLEAAKRITHSLFSGSLSEMTEADFAQLAQDGMPMIEMDKGADLQQA 366

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +V A    S  +AR+ + SNA+ +N    S+ +      D   +    L  GKKN+ + 
Sbjct: 367 LVDAELQPSRGQARKTIASNAVTVNGEKQSDPEYTFSDGDRLFSRYTLLRRGKKNYCLI 425


>gi|254464861|ref|ZP_05078272.1| tyrosyl-tRNA synthetase [Rhodobacterales bacterium Y4I]
 gi|206685769|gb|EDZ46251.1| tyrosyl-tRNA synthetase [Rhodobacterales bacterium Y4I]
          Length = 418

 Score =  507 bits (1307), Expect = e-141,   Method: Composition-based stats.
 Identities = 218/417 (52%), Positives = 283/417 (67%), Gaps = 3/417 (0%)

Query: 3   AFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
             KSDF++++ ERGF+   ++ + LD    QGV  AYIG+D TA SLH G L Q+M+L W
Sbjct: 4   TPKSDFVAVMMERGFLADCTDYQGLDEALLQGVRPAYIGFDATAKSLHVGSLIQIMMLRW 63

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG-KT 121
            QKTGH+PI+LMGGGT+ +GDPSFR + R ++   +I ENI  IK +FS++I Y T    
Sbjct: 64  FQKTGHQPITLMGGGTTKVGDPSFRADERPLLTEAQIDENIAGIKKVFSAYIDYDTDAPN 123

Query: 122 DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA 181
            ALMLNN  WL  + Y++ LR+IG  FSVNRMLSFESV+SRL REQSLSFLEFNYMILQA
Sbjct: 124 KALMLNNAEWLDGLNYLEFLRDIGRHFSVNRMLSFESVKSRLDREQSLSFLEFNYMILQA 183

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
           YDF+EL + Y C LQMGGSDQWGNI+ GIDL  R+   +++ LTSPLLTT+ G KMGKT 
Sbjct: 184 YDFMELNRRYGCILQMGGSDQWGNIVNGIDLTRRVIDHEVYGLTSPLLTTSDGKKMGKTA 243

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKI 301
            GAIWLN +M SPY FWQ+WRN  DADV  F K  T LP++E +R+  L G EIN AK I
Sbjct: 244 DGAIWLNADMRSPYEFWQFWRNTTDADVGRFLKLYTELPVAECERLGALAGSEINAAKVI 303

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGF 361
           +A E+TT+ HG + A  A   A E F+       +PT+S+S  ++  G+ ++ LIVK+G 
Sbjct: 304 LANEVTTLCHGADAAAAAEATAREVFEKGGVGDDLPTLSLSPADLGDGISIVQLIVKSGL 363

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLCG 418
           A S  +A+R +  +  KI++  +++  L I      S   IKLS GKK H +  L G
Sbjct: 364 AKSGKDAKRLIAEHGAKIDDQPLTDAGLIIDAGALTSP--IKLSAGKKRHALVRLDG 418


>gi|114328610|ref|YP_745768.1| tyrosyl-tRNA synthetase [Granulibacter bethesdensis CGDNIH1]
 gi|114316784|gb|ABI62844.1| tyrosyl-tRNA synthetase [Granulibacter bethesdensis CGDNIH1]
          Length = 431

 Score =  507 bits (1307), Expect = e-141,   Method: Composition-based stats.
 Identities = 202/411 (49%), Positives = 279/411 (67%), Gaps = 1/411 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           +S FL     RGF+ Q ++   LD   S G V+AY G+D TA SLH GH+ Q+MLL  LQ
Sbjct: 20  RSAFLREAEARGFLFQCTDQEALDNALSNGTVSAYTGFDCTADSLHVGHMMQIMLLRLLQ 79

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + GH+P+ L+GGGT+ IGDPSFR+E+R+++   +I  N++ I+     F+ +GTG TDA 
Sbjct: 80  RHGHRPVVLLGGGTTRIGDPSFREEARQLLTDAQIAANMDGIRANIEPFLTFGTGPTDAT 139

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           ++NN  WL ++ YI++LRE+G  FS+NRMLSF+SVR+RL+REQ L+FLEFNY ILQ+YDF
Sbjct: 140 LVNNADWLDTLGYIEILREVGVHFSINRMLSFDSVRTRLEREQGLTFLEFNYSILQSYDF 199

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
            EL +     LQ GGSDQW NII G+DL  R    ++F  T+PL+TTASG KMGKT  GA
Sbjct: 200 RELNRRLGVTLQFGGSDQWSNIISGVDLVRRTDGKQVFGFTAPLVTTASGAKMGKTAKGA 259

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WL  E  SPY++WQ+WRN +DADV  F +  T LP+ EI R+A LQG EINEAKKI+AT
Sbjct: 260 VWLTAEKLSPYDYWQFWRNTEDADVGRFLRLFTELPLDEIGRLAALQGAEINEAKKILAT 319

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E T ++HGRE AE AA  A   F+    +  +P+++I+  E++ G+ +L  +  AG A S
Sbjct: 320 EATGILHGRESAEAAAETARRAFEQGEAADTLPSVAIAASELAEGLPILRALTVAGLAQS 379

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
             EARR ++    ++NN  +++E L++   D    G IKLS G+K H +  
Sbjct: 380 NGEARRLIRGGGARVNNEAVTDEMLKLSPADL-QDGAIKLSAGRKQHRLLK 429


>gi|187776757|ref|ZP_02993230.1| hypothetical protein CLOSPO_00272 [Clostridium sporogenes ATCC
           15579]
 gi|187775416|gb|EDU39218.1| hypothetical protein CLOSPO_00272 [Clostridium sporogenes ATCC
           15579]
          Length = 407

 Score =  507 bits (1306), Expect = e-141,   Method: Composition-based stats.
 Identities = 181/407 (44%), Positives = 263/407 (64%), Gaps = 8/407 (1%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+   IL ERG+I Q+++  E+  L  +  ++ YIG+D TA SLH GH  Q+M++  +QK
Sbjct: 2   SNVYDILKERGYIKQLTHEEEIRELLGKEKISFYIGFDPTADSLHVGHFLQMMVMAHMQK 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+PI+L+GGGT +IGDP+ + + R+MM   +I+ N    K   +  I +   K  A+M
Sbjct: 62  AGHRPIALVGGGTGMIGDPTGKTDMRKMMTKDQIEHNCNCFKKQLAKIIDFSDDK--AIM 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  WL ++ YI+ LREIG  FSVN+ML+ E  +SRL  E+ LSFLEFNYM++Q YDF+
Sbjct: 120 VNNADWLLNLNYIEFLREIGVHFSVNKMLTAECFKSRL--EKGLSFLEFNYMLMQGYDFL 177

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           EL + Y+C +++GG DQW NI+ G+DL  R ++   + +T  LLT + G KMGKT SGA+
Sbjct: 178 ELNRKYNCVMELGGDDQWSNILAGVDLIRRKESKSAYGMTFTLLTNSEGKKMGKTESGAL 237

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
           WL+ E TSPY F+QYWRN+ DADV    + +T LPM E+ R++ L+G EINEAKK++A E
Sbjct: 238 WLDPEKTSPYEFYQYWRNVADADVEKCLRLITFLPMDEVRRLSSLEGAEINEAKKVLAFE 297

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHS-QHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           +T ++HG EEAEKA  AA   F  +     +MPT  I KD ++    L+ L+VK     S
Sbjct: 298 VTKLIHGEEEAEKAKVAAEALFGGNAKDLGNMPTAYIGKDHLNN--PLVDLLVKCEIFPS 355

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
            +EARR +K   + +N+  +++  L +  +     G I +  GKKN 
Sbjct: 356 KSEARRLIKQGGLYVNDEKVTDINLVVTEEHVTEDG-IMIRRGKKNF 401


>gi|307719118|ref|YP_003874650.1| tyrosyl-tRNA synthetase [Spirochaeta thermophila DSM 6192]
 gi|306532843|gb|ADN02377.1| tyrosyl-tRNA synthetase [Spirochaeta thermophila DSM 6192]
          Length = 410

 Score =  507 bits (1306), Expect = e-141,   Method: Composition-based stats.
 Identities = 179/412 (43%), Positives = 246/412 (59%), Gaps = 5/412 (1%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           SD L +L+ERG + Q ++   L     +G VT Y+G D T  SLHAGHL  L     L  
Sbjct: 2   SDALPLLAERGLVKQCTDLEGLGARMQEGPVTFYLGIDPTGPSLHAGHLVPLFAATHLVN 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+ I L+GGGT+ IGDPS + E RR++  +EI  N   I+     F      +  ALM
Sbjct: 62  AGHRAIILIGGGTARIGDPSGKTEMRRILSVEEIDRNARAIQAQIERFFPVDGKR--ALM 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           LNN  WL  + YID LREIG  FSVNRMLSFE+ ++RL  E  LSF+EFNY +LQAYDF+
Sbjct: 120 LNNAEWLAELNYIDFLREIGRHFSVNRMLSFETYKARL--ETGLSFIEFNYQLLQAYDFL 177

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L + Y C LQ+GG DQWGNI+ GIDL  R++  + + LT PL+T + G KMGKT  GA+
Sbjct: 178 VLNERYGCTLQIGGDDQWGNIVAGIDLIRRVRGEEAYGLTMPLVTRSDGKKMGKTEKGAL 237

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
           +L+  M SPY F+QYWRN+ D DV +F K  T LP+ EI  +     + IN AK+ +A E
Sbjct: 238 FLDPSMVSPYEFFQYWRNVPDQDVATFLKYYTFLPIDEIASLTAHTDERINLAKERLAYE 297

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQ-HMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           +T ++HGREEA+KA  A+   F      +  +P + I ++E+  G+G++ L VK     S
Sbjct: 298 LTALIHGREEADKALEASRAAFGKGGQDRSSIPFVEIPREELEHGIGVVELFVKTDLCAS 357

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            +EARR +      I    + + +  ++LQD    G + L  GKK +    +
Sbjct: 358 KSEARRLISQGGAYIEGEQVKDLEQVVRLQDVPEAGELLLRAGKKRYFRVVV 409


>gi|226322907|ref|ZP_03798425.1| hypothetical protein COPCOM_00679 [Coprococcus comes ATCC 27758]
 gi|225208693|gb|EEG91047.1| hypothetical protein COPCOM_00679 [Coprococcus comes ATCC 27758]
          Length = 407

 Score =  507 bits (1306), Expect = e-141,   Method: Composition-based stats.
 Identities = 178/406 (43%), Positives = 251/406 (61%), Gaps = 7/406 (1%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
                L  RG I Q+++   +  L + G  T YIG+D TA SLH GH   L L+  LQ+ 
Sbjct: 2   GIYEELKARGLIAQVTDEPLIRDLVNNGKATFYIGFDPTADSLHVGHFMALCLMKRLQEA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           G+KPI+L+GGGT++IGDPS R + R+MM  + IQ N +  K   S FI +  GK  ALM+
Sbjct: 62  GNKPIALIGGGTAMIGDPSGRTDMRQMMTPETIQHNCDCFKKQMSRFIDFSDGK--ALMV 119

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  + Y+++LRE+G+ FSVNRML+ E  + R+  E+ LSFLEFNYMI+Q+YDF  
Sbjct: 120 NNADWLMDLNYVEVLREVGAHFSVNRMLTAECYKQRM--EKGLSFLEFNYMIMQSYDFYM 177

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + Y C LQ GG DQW N++ G +L  R       A+T  LL  + G KMGKT SGA+W
Sbjct: 178 LYQKYGCNLQFGGDDQWSNMLGGTELIRRKLGKDASAMTITLLLNSEGKKMGKTQSGAVW 237

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           L+ E TSP+ F+QYWRN+ DADV+   + LT LP+ +ID M K +G ++N AK+I+A E+
Sbjct: 238 LDPEKTSPFEFYQYWRNVADADVLKCLRMLTFLPLEQIDEMDKWEGAQLNTAKEILAFEL 297

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATST 365
           T +VHG EEA KA   A   F    ++  MPT  +S ++ + G + +LTL+ K+G   S 
Sbjct: 298 TKLVHGEEEATKAQEGARALFSSG-NAADMPTAELSDEDFADGSVDILTLLHKSGLVASK 356

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           +EARR ++   + ++   +S+        DF+  G +    GKKN 
Sbjct: 357 SEARRAVQQGGVAVDGEKVSDIATTFAKADFEGEGKVV-RKGKKNF 401


>gi|255284138|ref|ZP_05348693.1| tyrosine--tRNA ligase [Bryantella formatexigens DSM 14469]
 gi|255265312|gb|EET58517.1| tyrosine--tRNA ligase [Bryantella formatexigens DSM 14469]
          Length = 408

 Score =  507 bits (1306), Expect = e-141,   Method: Composition-based stats.
 Identities = 178/409 (43%), Positives = 255/409 (62%), Gaps = 4/409 (0%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
                L  RG I Q++N  E+  + ++G  T YIG+D TA SLH GH   L L+  LQ  
Sbjct: 2   GIYEELVARGLIAQVTNEEEIRKMVNEGKATFYIGFDPTADSLHVGHFMALCLMKRLQMA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           G++PI+L+GGGT ++GDPS R + R+MM ++ I  NIE  K   S FI++G GK  ALM+
Sbjct: 62  GNRPIALLGGGTGMVGDPSGRTDMRQMMTTETINHNIECFKKQMSRFIEFGEGK--ALMV 119

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL ++ YI+ LRE+G  FSVN ML  E  + R+  E+ LSFLEFNYMI+Q+YDF+E
Sbjct: 120 NNADWLTNLNYIEFLREVGPHFSVNNMLRAECYKQRM--EKGLSFLEFNYMIMQSYDFLE 177

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + Y C +Q GG DQW N++ G +L  R       A+T  LL  + G KMGKT SGA+W
Sbjct: 178 LYQRYGCNMQFGGDDQWSNMLGGTELIRRKLGKDAHAMTITLLLNSEGKKMGKTQSGAVW 237

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           L+   TSPY F+QYWRN+ DADV+   + LT LP+ EID M K +G ++N+AK+I+A E+
Sbjct: 238 LDPNKTSPYEFYQYWRNVADADVLKCIRMLTFLPLEEIDEMDKWEGSQLNKAKEILAFEL 297

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
           T +VHG +EA+KA  AA   F     S+++PT    + E+  G  +L+L+V+   + S +
Sbjct: 298 TKLVHGEDEAKKADEAAKALFAGGGKSENVPTTVYPQAELDAGKDILSLLVETKLSASRS 357

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           EARR ++   + +N+  ++         DFD+ G + +  GKK +    
Sbjct: 358 EARRLVQQGGVTVNDKKVTAIDRVFTTADFDADGVLLIKKGKKGYHQIK 406


>gi|146311467|ref|YP_001176541.1| tyrosyl-tRNA synthetase [Enterobacter sp. 638]
 gi|189083653|sp|A4W9W0|SYY_ENT38 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|145318343|gb|ABP60490.1| tyrosyl-tRNA synthetase [Enterobacter sp. 638]
          Length = 424

 Score =  507 bits (1306), Expect = e-141,   Method: Composition-based stats.
 Identities = 155/419 (36%), Positives = 233/419 (55%), Gaps = 11/419 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 4   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQE 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKPI+L+GG T +IGDPSF+   R++     +QE ++KI+   + F+ +  G+  A+ 
Sbjct: 64  MGHKPIALVGGATGLIGDPSFKAAERKLNTEDTVQEWVDKIRKQVAPFLDFDCGENSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDF 184
            NN  W  ++  +  LR+IG  FSVN+M++ E+V+ RL R +Q +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDQGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L + +   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 184 ACLNELHGVALQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI   +   K  GK    A+ +
Sbjct: 244 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMDIEEINALEEEDKNSGKAPR-AQYV 302

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTL 355
           +A  +T +VH  +    A       F+ ++        + +    +   E+ +G  L+  
Sbjct: 303 LADLVTRLVHCEDGLAAAKRITASLFNGTLSDLSEADFEQLAQDGVPMVEMEKGADLMQA 362

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +V +    S  +AR+ + SNAI IN    ++ +      D        L  GKKN+ + 
Sbjct: 363 LVDSELQPSRGQARKTIASNAITINGEKQADPEYTFVDGDRLYGRYTLLRRGKKNYCLI 421


>gi|225028572|ref|ZP_03717764.1| hypothetical protein EUBHAL_02851 [Eubacterium hallii DSM 3353]
 gi|224954103|gb|EEG35312.1| hypothetical protein EUBHAL_02851 [Eubacterium hallii DSM 3353]
          Length = 410

 Score =  507 bits (1306), Expect = e-141,   Method: Composition-based stats.
 Identities = 178/410 (43%), Positives = 256/410 (62%), Gaps = 8/410 (1%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG I Q+++  E+  L + G    YIG+D TA SLH GH   L L+  LQ  G
Sbjct: 3   VYDELVARGLIAQVTDEEEIKELVNNGKAVFYIGFDPTADSLHVGHFMALCLMKRLQMAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           +KPI+L+GGGT++IGDPS R + R+MM  + I  N+E  K   S FI +  GK  A+++N
Sbjct: 63  NKPIALIGGGTAMIGDPSGRTDMRQMMTKETINHNVECFKKQMSRFIDFSDGK--AMLVN 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  + Y++LLRE+G  FSVN ML  E  + R+  E+ LSFLEFNYMI+Q+YDF EL
Sbjct: 121 NADWLLDLNYVELLREVGPCFSVNNMLRAECYKQRM--EKGLSFLEFNYMIMQSYDFYEL 178

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKL--FALTSPLLTTASGTKMGKTLSGAI 245
            + Y C +Q GG+DQW N++ G +L  R   P    +A+T  LL  + G KMGKT SGA+
Sbjct: 179 YQKYGCNMQFGGNDQWSNMLGGTELIRRKLGPDADAYAMTITLLLNSEGKKMGKTQSGAV 238

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
           WL+   TSP++F+QYWRN+ DADV+   + LT LP+ EID M   +G ++NEAK+I+A E
Sbjct: 239 WLDPNKTSPFDFYQYWRNVADADVMKCIRMLTFLPLEEIDAMDSWEGSKLNEAKEILAFE 298

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATS 364
           +T +VHG EEA+KA  AA   F     + +MP  +++++++  G + +L L+VK+G A +
Sbjct: 299 LTKLVHGEEEAQKAQDAARALFSNGGDTANMPACAVTEEDLRDGTVDILALLVKSGLAGT 358

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +EARR++    + ++   +++ K    L DF   G   L  GKK  I  
Sbjct: 359 RSEARRNVTQGGVTLDGEKVTDFKAVYTLDDFKGEGK-VLKRGKKKFIKI 407


>gi|160895404|ref|ZP_02076174.1| hypothetical protein CLOL250_02962 [Clostridium sp. L2-50]
 gi|156862975|gb|EDO56406.1| hypothetical protein CLOL250_02962 [Clostridium sp. L2-50]
          Length = 413

 Score =  507 bits (1306), Expect = e-141,   Method: Composition-based stats.
 Identities = 176/408 (43%), Positives = 253/408 (62%), Gaps = 7/408 (1%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           K      L  RG I Q ++  E+  L + G    YIG+D TA SLH GH   L L+  LQ
Sbjct: 7   KMKVYDELVARGLIAQTTDEEEIKELVNNGKAVFYIGFDPTADSLHVGHFMALCLMKRLQ 66

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             G+KPI+L+GGGT++IGDPS R + R+MM ++ I  N+E  K   S FI +  GK  AL
Sbjct: 67  MAGNKPIALIGGGTAMIGDPSGRTDMRQMMTTETIAHNVECFKKQMSRFIDFSEGK--AL 124

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           ++NN  WL  + Y+D+LRE+G  FSVN ML  E  + R+  E+ LSFLEFNYMI+Q+YDF
Sbjct: 125 LVNNADWLLDLNYVDVLREVGPHFSVNNMLRAECYKQRM--EKGLSFLEFNYMIMQSYDF 182

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
            EL + Y C +Q GG DQW N++ G +L  R      +A+T  LL  + G KMGKT  GA
Sbjct: 183 YELFQKYGCNMQFGGDDQWSNMLGGTELIRRKLGKDAYAMTITLLLNSEGKKMGKTQKGA 242

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WL+   TSP+ F+QYWRN+ DADV+   + LT LP+ EID+M   +G ++N AK+I+A 
Sbjct: 243 VWLDPNKTSPFEFYQYWRNVADADVLKCIRMLTFLPLEEIDKMDSWEGSQLNTAKEILAF 302

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFAT 363
           E+T +VHG EEA KA  +A   F   + +  MP++++S D+   G + +++++VK+G  +
Sbjct: 303 ELTKLVHGEEEAVKAQESARALFSQGVAA-DMPSVTLSADDFKDGAIDIVSVLVKSGLVS 361

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           S NE RR ++   + ++   I +  + I  + FD  G I +  GKKN 
Sbjct: 362 SRNEGRRAVEQGGVAVDGDKIPDISVTIPEEKFDGDG-IVVRRGKKNF 408


>gi|150391338|ref|YP_001321387.1| tyrosyl-tRNA synthetase [Alkaliphilus metalliredigens QYMF]
 gi|149951200|gb|ABR49728.1| tyrosyl-tRNA synthetase [Alkaliphilus metalliredigens QYMF]
          Length = 409

 Score =  507 bits (1305), Expect = e-141,   Method: Composition-based stats.
 Identities = 184/412 (44%), Positives = 253/412 (61%), Gaps = 4/412 (0%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+   IL ERGFI Q ++  E+  L  +  +T Y+G+D TA SLH GH  QLM++  +QK
Sbjct: 2   SNVFDILKERGFIAQATHEDEIQQLLGKEPITFYVGFDPTADSLHVGHFLQLMVMSHMQK 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH PI L GGGT++IGDPS + + R+MM  + IQ N++        F+ +   K   + 
Sbjct: 62  AGHIPIFLAGGGTAMIGDPSGKTDMRKMMTPETIQHNVDCFMEQTKRFLDFSENKG--IT 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  WL S+ YI  +REIG  FSVNRML+ E  +SR+  E+ LSFLEFNYMI+Q+YDF+
Sbjct: 120 VNNADWLMSLNYIPFIREIGKHFSVNRMLTAECFKSRM--EKGLSFLEFNYMIMQSYDFL 177

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           EL + ++CRLQ+GG DQW NII G DL  R++    + +T  LLTT+ G KMGKT SGAI
Sbjct: 178 ELFRRHNCRLQLGGDDQWSNIIAGTDLIRRVEGESAYGMTFTLLTTSEGKKMGKTESGAI 237

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
           WL+   TSP++F+QYWRN+ DADV      LT L M EI+R+A L+G EIN+AK+ +A E
Sbjct: 238 WLDPNKTSPFDFYQYWRNVGDADVRKCLCLLTFLSMEEINRLATLEGSEINQAKETLAFE 297

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           +T++VHG EEA +A  AA   F         P+  + K E   G+ +LTL+ K   A+S 
Sbjct: 298 VTSLVHGEEEARRAQEAARALFSKGALGGSFPSTELPKSEFIDGIDVLTLLTKLQLASSR 357

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            E RR ++   I IN+  I   +  I    F     + +  GKK +    L 
Sbjct: 358 GEGRRLVQQGGISINDEKIVEIEAVINQSSFLEDDTLMIKKGKKVYHQVRLV 409


>gi|329298922|ref|ZP_08256258.1| tyrosyl-tRNA synthetase [Plautia stali symbiont]
          Length = 424

 Score =  507 bits (1305), Expect = e-141,   Method: Composition-based stats.
 Identities = 160/424 (37%), Positives = 233/424 (54%), Gaps = 21/424 (4%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q 
Sbjct: 4   SNLIQQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQD 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++  ++ + E +EKI+   + F+ +  G   A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTTETVNEWVEKIRKQVAPFLDFDCGDNSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDF 184
            NN  W   +  +  LR+IG  FSVN+M++ E+V+ RL RE Q +S+ EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGCMNVLTFLRDIGKHFSVNQMINREAVKMRLNREDQGISYTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
            EL K YD  LQ+GGSDQWGNI  GIDL  RL   + + LT  L+T + GTK GKT  GA
Sbjct: 184 AELNKRYDVVLQIGGSDQWGNITSGIDLTRRLHQQQAWGLTVLLITKSDGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI   +   K  GK    A+ +
Sbjct: 244 VWLDAKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINALEEEDKNSGKAPR-AQYV 302

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS-----------QHMPTISISKDEVSRGM 350
           +A ++T +VHG+     A       F  S+               MPTIS++ D+     
Sbjct: 303 LAEQVTRLVHGQSGLSAAKRITDSLFSGSLSDMTEADFEQLAQDGMPTISLNADD----- 357

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            L   +V A    S  +AR  + SNA+ +N    S+ + +    D        L  GKK+
Sbjct: 358 DLQQALVAAELVPSRGQARTMIGSNAVSVNGEKQSDAEYRFSDSDKLFGRYTLLRRGKKH 417

Query: 411 HIIC 414
           + + 
Sbjct: 418 YCLI 421


>gi|323705684|ref|ZP_08117257.1| tyrosyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum LX-11]
 gi|323534902|gb|EGB24680.1| tyrosyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum LX-11]
          Length = 405

 Score =  507 bits (1305), Expect = e-141,   Method: Composition-based stats.
 Identities = 182/404 (45%), Positives = 261/404 (64%), Gaps = 7/404 (1%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
              +L ER FI Q+++  E+  L  +  VT YIG+D TA SLH GH  QLM++  +Q+ G
Sbjct: 3   VFDVLKERNFIQQMTHEDEIKELLEKEKVTFYIGFDPTADSLHVGHFLQLMVMAHMQRAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+PI+L+GGGT++IGDP+ + + R+M+  +EI  N E  K   S FI +  GK  A++ N
Sbjct: 63  HRPIALIGGGTAMIGDPTGKTDMRKMLTKEEISHNAEAFKRQMSRFIDFSDGK--AILAN 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL ++ Y++ LR+IG  FSVN+ML+ E  + RL+R   LSFLEFNYM++QAYDF+ L
Sbjct: 121 NADWLLNLNYVEFLRDIGVHFSVNKMLTAECFKMRLER--GLSFLEFNYMLMQAYDFLML 178

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            K Y C LQMGG DQW NI+ G+DL  R +  + + +T  LLTT+ G KMGKT  GAIWL
Sbjct: 179 NKEYGCVLQMGGDDQWSNILAGVDLIRRKEGKQAYGMTFTLLTTSEGKKMGKTEKGAIWL 238

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           + + T PY+F+QYWRNIDD+DV      LT LP+ E+ R+  L+ KEINEAKK++A E+T
Sbjct: 239 DADKTPPYDFYQYWRNIDDSDVEKCLSLLTFLPIDEVRRLGSLKDKEINEAKKVLAYEVT 298

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
            +VHG +EAEKA  AA   F+      ++PT +I+ D +  G+ LL ++VK G   S +E
Sbjct: 299 KLVHGVDEAEKAKKAAEALFEGRGDLSNVPTSTITSDML--GLNLLDVLVKTGIIPSKSE 356

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
            RR +    + +N+  + +    +  +D    G + L  GKK++
Sbjct: 357 GRRLITQGGLYVNDENVKDVNAVVT-EDMFKEGYMILRRGKKSY 399


>gi|284048192|ref|YP_003398531.1| tyrosyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731]
 gi|283952413|gb|ADB47216.1| tyrosyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731]
          Length = 408

 Score =  507 bits (1305), Expect = e-141,   Method: Composition-based stats.
 Identities = 176/408 (43%), Positives = 256/408 (62%), Gaps = 4/408 (0%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + L +L ERG++ Q+S+P E+  L  +  +T YIG+D TA SLH GH   LM++  +Q+ 
Sbjct: 2   NVLDVLEERGYLKQMSHPDEIRELLGKEKITFYIGFDPTADSLHVGHFIALMVMAHMQRA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI L+GGGT ++GDPS ++E R+M+  + I  NIE  K     FI    GK  A++ 
Sbjct: 62  GHRPIILLGGGTGMVGDPSGKNEMRKMLTPEFINHNIECFKKQIGRFIDLSEGK--AIVA 119

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  + Y+D+LR +G  FSVNRML+ +  ++RL  +  L+F E NYMI+QAYDF  
Sbjct: 120 NNADWLLKLNYVDMLRSVGVHFSVNRMLAADCYKTRLASDNGLTFFEMNYMIMQAYDFYT 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L KNY+C +++GG DQW N+I G++L  R      + +T+ LLT + G KMGKT+ GA+W
Sbjct: 180 LHKNYNCVMELGGDDQWSNMIAGVELIRRKDRQPAYCMTNTLLTNSQGQKMGKTVGGAVW 239

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           L+ E  SPY+F+QYWRNIDDADV      LT LPM E+ R+  LQG EINEAKK++A E+
Sbjct: 240 LDPEKFSPYDFYQYWRNIDDADVEKCLALLTFLPMEEVRRLGALQGAEINEAKKVLAYEV 299

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
           T +VHG  EAEKA  A    F    +  ++PTI++ KDE   G  LL L+ +     + +
Sbjct: 300 TKIVHGEAEAEKAKNATEALFGSGSNLDNVPTITVRKDEW--GCRLLDLLAENKVIATKS 357

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           E RR ++ N + I+++ +++    +    F    ++ L  GKK +   
Sbjct: 358 EGRRLMQQNGLSIDDAKVTDVDTLVDDALFADKESLMLRKGKKKYYRL 405


>gi|225018356|ref|ZP_03707548.1| hypothetical protein CLOSTMETH_02300 [Clostridium methylpentosum
           DSM 5476]
 gi|224948873|gb|EEG30082.1| hypothetical protein CLOSTMETH_02300 [Clostridium methylpentosum
           DSM 5476]
          Length = 407

 Score =  507 bits (1305), Expect = e-141,   Method: Composition-based stats.
 Identities = 169/403 (41%), Positives = 259/403 (64%), Gaps = 6/403 (1%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG I Q+++  ++        VT YIG+D TA SLH GH  QL+++  LQ  G
Sbjct: 3   VFEELKRRGLIAQMTHEDKIKEALENEQVTFYIGFDATADSLHVGHFLQLVVMRHLQLAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKP++L+G GT+++GDP+ R + R+M+  +EI  N E  K   S FI +   K  AL++ 
Sbjct: 63  HKPVALLGTGTTMVGDPTGRTDMRQMLTPEEINHNAECFKKQMSKFIDFSDDK--ALIVK 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL ++ YID LR++G +FSVN+ML+ ESV++RL+R   LSFLEFNYM++Q+YDF+ L
Sbjct: 121 NGDWLLNLNYIDFLRDVGRYFSVNQMLTAESVKNRLER--GLSFLEFNYMLMQSYDFLHL 178

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            +   C +++GG DQW NI+ GIDL  R++  +++ +T  LLTT  G KMGKT  GA+WL
Sbjct: 179 YQTMGCTMELGGDDQWSNILKGIDLVRRVEGEEVYGMTFTLLTTKEGKKMGKTAKGALWL 238

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           ++   SPY+F+QYWRN+ D DV++  K +T LP+ EI+ M   +G ++N+AK+I+A E+T
Sbjct: 239 DENKCSPYDFFQYWRNVSDDDVINCLKLITFLPIEEIEAMESWEGSQLNKAKEILAFEVT 298

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTN 366
            MVHG E+A +A  AA   F  +    +MPT  ++  + + G +GLL L+VK     S  
Sbjct: 299 KMVHGEEKATEALGAARALFTANSDDANMPTTQLADSDFNDGQIGLLDLMVKTKLCPSKG 358

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
           EARR ++   + +++  +++    +  QDF+  G++ +  GKK
Sbjct: 359 EARRLVQQGGVSVDDVKVTDPAKVLTAQDFEK-GHVIIKKGKK 400


>gi|295093737|emb|CBK82828.1| tyrosyl-tRNA synthetase [Coprococcus sp. ART55/1]
          Length = 406

 Score =  506 bits (1304), Expect = e-141,   Method: Composition-based stats.
 Identities = 171/405 (42%), Positives = 253/405 (62%), Gaps = 7/405 (1%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG I Q ++  E+  L + G    YIG+D TA SLH GH   L L+  LQ  G
Sbjct: 3   IYDELVARGLIAQTTDEDEIRDLVNNGKAVFYIGFDPTADSLHVGHFMALCLMKRLQMAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           +KPI+L+GGGT++IGDPS R + R+MM  + IQ N++  K   S FI +   K  AL++N
Sbjct: 63  NKPIALIGGGTAMIGDPSGRTDMRQMMTKETIQHNVDCFKKQMSKFIDFSEDK--ALLVN 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  + Y+D+LR++G+ FSVN ML  E  + R+  E+ LSFLEFNYMI+Q+YDF  L
Sbjct: 121 NADWLLDLNYVDVLRDVGACFSVNNMLRAECYKQRM--EKGLSFLEFNYMIMQSYDFYVL 178

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            + Y C +Q GG DQW N++ G +L  R      +A+T  LL  + G KMGKT  GA+WL
Sbjct: 179 YQKYGCNMQFGGDDQWSNMLGGTELIRRKLGKDAYAMTITLLLNSEGKKMGKTQKGAVWL 238

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           +   TSP+ F+QYWRN+ DADV+   + LT LP+ EID+M   +G ++N+AK+I+A E+T
Sbjct: 239 DPNKTSPFEFYQYWRNVADADVLKCIRMLTFLPLEEIDKMDSWEGSQLNQAKEILAYELT 298

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTN 366
            +VHG EEA KA  +A   F   + +  MP+++++ D+   G + +++++VK+G  TS N
Sbjct: 299 KLVHGEEEAAKAQESARALFSKGVAA-DMPSVTLAADDFKDGAIDIVSVLVKSGLVTSRN 357

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           E RR ++   + ++   I++ +  I  + FD  G + +  GKKN 
Sbjct: 358 EGRRAVEQGGVAVDGEKITDVQTTILQEKFDGEG-VVVRRGKKNF 401


>gi|257869086|ref|ZP_05648739.1| tyrosyl-tRNA synthetase [Enterococcus gallinarum EG2]
 gi|257803250|gb|EEV32072.1| tyrosyl-tRNA synthetase [Enterococcus gallinarum EG2]
          Length = 420

 Score =  506 bits (1304), Expect = e-141,   Method: Composition-based stats.
 Identities = 159/421 (37%), Positives = 235/421 (55%), Gaps = 17/421 (4%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           SDF   L  RG +HQ ++   L    ++  V  YIG+D TA SLH GHL  +++L   Q+
Sbjct: 3   SDFFEELKSRGLVHQTTDESALIKQLNEESVKLYIGFDPTADSLHIGHLLPILMLRRFQQ 62

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH PI+L+GGGT +IGDPSF+D+ R++     ++E  + IK   S FI +      A++
Sbjct: 63  RGHVPIALVGGGTGMIGDPSFKDQERQLNTLDTVKEWSQSIKNQLSRFIDFEDQTNPAIL 122

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
            NN  WL  +K ID LR++G  F++N M+S ESV+ R+  E  +S+ EF Y +LQAYDF+
Sbjct: 123 ANNYDWLGELKLIDFLRDVGKNFTINYMMSKESVKRRI--ETGISYTEFAYQLLQAYDFL 180

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L   + C LQ+GGSDQWGNI  GI+L  R +  + F LT PL+T A GTK GKT   A+
Sbjct: 181 NLYDEHGCLLQLGGSDQWGNITSGIELLRREREVQGFGLTMPLITKADGTKFGKTEGNAV 240

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIA 303
           WL+ + T+PY F+Q+W N DD D V F K  T L + EI  + K  L   E   A+K +A
Sbjct: 241 WLDADKTTPYEFYQFWINTDDRDAVKFLKYFTFLSLEEIAAIEKEFLAAPETRVAQKALA 300

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLL 353
            E+TT+VHG +  E+A   +   F+  I            + +PT  +S D+    + ++
Sbjct: 301 KEVTTLVHGAKAYEQAVHISESLFNGDIKGLSADEIAQGFKGVPTYQVSNDD---ELNIV 357

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            L+  +    S  +AR  +++ AI +N          I  +D      + +  GKK + +
Sbjct: 358 ELLTTSKIEASKRQAREDIQNGAIYVNGERQQELNYVINEEDRIGGKYVVIRRGKKKYFL 417

Query: 414 C 414
            
Sbjct: 418 L 418


>gi|225174287|ref|ZP_03728286.1| tyrosyl-tRNA synthetase [Dethiobacter alkaliphilus AHT 1]
 gi|225170072|gb|EEG78867.1| tyrosyl-tRNA synthetase [Dethiobacter alkaliphilus AHT 1]
          Length = 407

 Score =  506 bits (1304), Expect = e-141,   Method: Composition-based stats.
 Identities = 172/405 (42%), Positives = 246/405 (60%), Gaps = 7/405 (1%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG I Q+++  E+  L + G    YIG+D TA SLH GH   L L+  LQ  G
Sbjct: 3   IYDELIARGLIAQVTDEEEIKELVNSGQAIFYIGFDPTADSLHVGHFMALSLMKRLQMAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           +KPI L+GGGT+ IGDPS R + R MM  + IQ N E  K     FI++G  K  A+M+N
Sbjct: 63  NKPIVLLGGGTAYIGDPSGRTDLRNMMTPEIIQHNSECFKKQMEKFIEFGDDK--AIMVN 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  + YID+LRE+G  FSVN ML  E  + R+  E+ LSFLEFNYMI+Q+YDF  L
Sbjct: 121 NADWLLELNYIDMLREVGPHFSVNNMLRAECYKQRM--EKGLSFLEFNYMIMQSYDFFYL 178

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            + Y C +Q GG DQW N++ G +L  R      +A+T  LL T+ G KMGKT  GA+WL
Sbjct: 179 YQKYGCNMQFGGDDQWSNMLGGTELIRRKLGEDAYAMTITLLMTSEGNKMGKTAKGAVWL 238

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           +   T P+ F+QYWRN+ DADV+   + LT LP+ EI+ M K +G ++NEAK+I+A E+T
Sbjct: 239 DPNKTPPFEFFQYWRNVADADVLKCIRMLTFLPLEEIEAMDKWEGSQLNEAKEILAYELT 298

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTN 366
            ++HG EEA+KA +A+   F       +MPT  I+ ++++ G +G+L L++  G   S +
Sbjct: 299 KLIHGEEEAKKAKSASHALFAGGTDDSNMPTTEITTEQLTDGAIGILDLLLACGLTPSKS 358

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           EARR ++   + + +  + +    I  +   +   IK+  GKK +
Sbjct: 359 EARRLVQQGGVFVEDEKVESIDTNITAEQLKNG--IKIRKGKKTY 401


>gi|149913839|ref|ZP_01902371.1| tyrosyl-tRNA synthetase [Roseobacter sp. AzwK-3b]
 gi|149812123|gb|EDM71954.1| tyrosyl-tRNA synthetase [Roseobacter sp. AzwK-3b]
          Length = 416

 Score =  506 bits (1304), Expect = e-141,   Method: Composition-based stats.
 Identities = 216/413 (52%), Positives = 284/413 (68%), Gaps = 2/413 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KSDFL ++ ERGF+   ++ + LD   + G VTAYIGYD TA SLH GHL  +M+L WLQ
Sbjct: 6   KSDFLRVMIERGFLADCTDLQALDDSLTSGTVTAYIGYDATAKSLHVGHLLNIMMLRWLQ 65

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           KTGH+PI+LMGGGT+ +GDPSFR + R ++   +I ENI  ++ +F+ ++ YG     AL
Sbjct: 66  KTGHRPITLMGGGTTKVGDPSFRSDERPLLDEAQIAENIGGMQQVFARYLDYGDTAPGAL 125

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           MLNN  WL  +KYI+ LR+IG +FSVNRMLSFESV+SRL REQSLSFLEFNYMILQAYDF
Sbjct: 126 MLNNAEWLDGLKYIEFLRDIGRYFSVNRMLSFESVKSRLDREQSLSFLEFNYMILQAYDF 185

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL + Y C LQMGGSDQWGNI+ GIDL  R+   +++ LTSPLLTTA G KMGK+  GA
Sbjct: 186 LELNRRYGCTLQMGGSDQWGNIVNGIDLTRRVVAHEVYGLTSPLLTTADGRKMGKSAGGA 245

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WLN +M SPY FWQ+WRN  DADV  F K  T LP+ E DR++ L G EIN AK I+A 
Sbjct: 246 VWLNADMLSPYEFWQFWRNTLDADVGRFLKLYTELPVEECDRLSALAGSEINAAKIILAN 305

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E+TT++HG + A  A   A E F+       +PT+ ++ DE++ GM ++ L V+ G A S
Sbjct: 306 EVTTLLHGADAARTAEATAREVFEKGGVGDDLPTLELTMDELAEGMSIVQLFVRTGLAKS 365

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
             +A+R +     +I+++ +++  L I      S   IKLS GKK H +  L 
Sbjct: 366 GKDAKRLIAEQGARIDDAPLTDSGLMIDAAALASP--IKLSAGKKRHALVKLA 416


>gi|194017821|ref|ZP_03056430.1| tyrosyl-tRNA synthetase [Bacillus pumilus ATCC 7061]
 gi|194010473|gb|EDW20046.1| tyrosyl-tRNA synthetase [Bacillus pumilus ATCC 7061]
          Length = 422

 Score =  506 bits (1303), Expect = e-141,   Method: Composition-based stats.
 Identities = 159/420 (37%), Positives = 237/420 (56%), Gaps = 13/420 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S  +  LS RG I Q ++   L  L S+  +  Y G+D TA SLH GHL  ++ L   Q+
Sbjct: 2   SQLMEELSFRGLIQQQTDEEGLTKLLSEEKIKLYSGFDPTADSLHIGHLLPILTLRRFQE 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH PI+L+GG T +IGDPSF+   R +  ++ +++  +KIKG  S F+ +  G+  A++
Sbjct: 62  AGHHPIALVGGATGLIGDPSFKKAERSLNPAEIVEQWSDKIKGQLSQFLDFEAGENPAVI 121

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  W+  +  I  LR+IG  F VN ML+ + V SR+  E  +S+ EF+Y+ILQ+ DF+
Sbjct: 122 VNNFDWISQMNVITFLRDIGKNFGVNFMLAKDIVSSRI--ETGISYTEFSYVILQSLDFL 179

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGE--RLKTPKLFALTSPLLTTASGTKMGKTLSG 243
            L KN +C+LQ+GGSDQWGNI  G++L      +  K F LT PL+T A GTK GKT  G
Sbjct: 180 NLYKNENCKLQIGGSDQWGNITSGLELIRKSEAEGAKAFGLTMPLVTKADGTKFGKTEGG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKI 301
           AIWL+KE TSPY F+Q+W N DD DVV + K  T L   EI    +      E  EA++ 
Sbjct: 240 AIWLDKEKTSPYEFYQFWINTDDRDVVKYLKYFTFLSKEEIASYEEKVQTAPEKREAQRR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVS-------RGMGLLT 354
           +A E+TT+VHGRE  E+A   +   F   I S     + +   +V          + L+ 
Sbjct: 300 LAEEVTTLVHGRESLEQAVNISNALFKGEIKSLSAEEVKVGFKDVPSMEKSSTEELTLVD 359

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           ++V++  + S  +AR  + + A+ IN    +++   +  +D        L  GKK + + 
Sbjct: 360 VLVESKLSPSKRQAREDITNGAVSINGERQTDKDYVLSTEDRIENQFTVLRRGKKKYFLV 419


>gi|296114834|ref|ZP_06833482.1| tyrosyl-tRNA synthetase [Gluconacetobacter hansenii ATCC 23769]
 gi|295978540|gb|EFG85270.1| tyrosyl-tRNA synthetase [Gluconacetobacter hansenii ATCC 23769]
          Length = 420

 Score =  506 bits (1303), Expect = e-141,   Method: Composition-based stats.
 Identities = 201/421 (47%), Positives = 274/421 (65%), Gaps = 9/421 (2%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           MP  KS+FL     RGFI Q ++   LD       V+ YIG+D TA SLH G L Q+M+L
Sbjct: 1   MP--KSEFLREAEARGFIFQCTDMEALDAAMQARPVSGYIGFDPTADSLHVGSLIQIMML 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG- 119
             LQK GH+P++L+GGGT+ IGDPSFR+E+R++M ++ I +N+  I+G    F+ +    
Sbjct: 59  RLLQKHGHRPVALVGGGTAKIGDPSFREEARQLMTAETIAQNLRGIEGCLRQFLSFDDKS 118

Query: 120 ----KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFN 175
               K+ A++ NN  WL  + YIDLLR++G  FS+NRMLSF+SVRSRL+REQ L+FLEFN
Sbjct: 119 SAKDKSGAILANNADWLDRLSYIDLLRDVGVHFSINRMLSFDSVRSRLEREQGLTFLEFN 178

Query: 176 YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT 235
           Y ILQ+YDF EL   +   LQMGGSDQWGNI+ GIDL  R+   ++F LT+PLLTT+SGT
Sbjct: 179 YSILQSYDFRELNARHGVTLQMGGSDQWGNIVSGIDLVRRMNQQQVFGLTTPLLTTSSGT 238

Query: 236 KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI 295
           KMGK+  GA+WL+      + +WQ+WRN +DADV  F +  T LP+ E DR+A L G  I
Sbjct: 239 KMGKSARGAVWLSAARLPVFEYWQFWRNTEDADVGRFLRLFTDLPVEECDRLAALPGAGI 298

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS-QHMPTISISKDEVSRGMGLLT 354
           NEAKK++ATE T + HGR  AE+AA AA   F+    S + +P+ISI+   +  G+    
Sbjct: 299 NEAKKVLATEATALCHGRAAAEQAAEAARRTFEEGALSAEALPSISIAAATLHEGIPAFR 358

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           L   +G   S  EARR ++    ++N+ ++++E   I   D    G IKLS GKK HI+ 
Sbjct: 359 LFADSGLVASNGEARRLIRGGGARLNDEVVTDEGRMIGEGDL-HDGVIKLSSGKKKHILV 417

Query: 415 H 415
            
Sbjct: 418 R 418


>gi|300716511|ref|YP_003741314.1| Tyrosyl-tRNA synthetase [Erwinia billingiae Eb661]
 gi|299062347|emb|CAX59464.1| Tyrosyl-tRNA synthetase [Erwinia billingiae Eb661]
          Length = 424

 Score =  506 bits (1303), Expect = e-141,   Method: Composition-based stats.
 Identities = 156/419 (37%), Positives = 228/419 (54%), Gaps = 11/419 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG I Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q 
Sbjct: 4   SNLIKQLQERGLIAQVTDEDALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQD 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+P++L+GG T +IGDPSF+ + R++  S+ + E +EKI+   + F+ +  G   A+ 
Sbjct: 64  AGHRPVALVGGATGLIGDPSFKADERKLNTSETVGEWVEKIRHQVAPFLDFDCGDNSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDF 184
            NN  W  ++  +  LR+IG  FSVN+M++ E+V+ RL R +Q +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDQGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L + +   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  GA
Sbjct: 184 ACLNERHGVALQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKSDGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKI 301
           +WL+   TSPY F+Q+W N  DADV  F K  T + + EI   +   K  GK    A+ +
Sbjct: 244 VWLDASKTSPYKFYQFWINTADADVYRFLKFFTFMSLEEINALEEEDKNSGKAPR-AQYV 302

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTL 355
           +A  +T +VHG E    A       F  S+        + +    I    + R   L   
Sbjct: 303 LAERVTRLVHGEEGLAAAERITKSLFSGSLSEMTEADFEQLAQDGIPFVALDRDQDLQQA 362

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +V    A S  +AR+ ++S A+ IN     + +      D        L  GKKN+ + 
Sbjct: 363 MVDGDLAPSRGQARKLIESKAVSINGEPQLSAEYTFAETDRLFDRFTLLRRGKKNYCLI 421


>gi|293396285|ref|ZP_06640563.1| tyrosine-tRNA ligase [Serratia odorifera DSM 4582]
 gi|291421074|gb|EFE94325.1| tyrosine-tRNA ligase [Serratia odorifera DSM 4582]
          Length = 428

 Score =  506 bits (1303), Expect = e-141,   Method: Composition-based stats.
 Identities = 160/423 (37%), Positives = 228/423 (53%), Gaps = 21/423 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q  
Sbjct: 9   NLIQQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQLA 68

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP++L+GG T +IGDPSF+   R++  S+ + E ++KI+   S F+ +  G   A+  
Sbjct: 69  GHKPVALVGGATGLIGDPSFKAAERKLNTSETVSEWVDKIRKQVSPFLDFDCGSNSAIAA 128

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYDFV 185
           NN  W   +  +  LR+IG  FSVN+M++ E+V+ RL R+   +SF EF+Y +LQ YDF 
Sbjct: 129 NNYDWFGGMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDVGISFTEFSYNLLQGYDFA 188

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           EL   +   LQ+GGSDQWGNI  GIDL  R+   ++F LT PL+T A GTK GKT  GA+
Sbjct: 189 ELNHRHQVVLQIGGSDQWGNITSGIDLTRRMHQQQVFGLTVPLITKADGTKFGKTEGGAV 248

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ---GKEINEAKKII 302
           WL  E TSPY F+Q+W N  DADV  F K  T + + +I+ +       GK    A+ ++
Sbjct: 249 WLAPEKTSPYKFYQFWINTADADVYRFLKFFTFMSLEDINALEAEDRSSGKAPR-AQYVL 307

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHS-----------QHMPTISISKDEVSRGMG 351
           A E+T MVHG +    A       F  ++H              MPTI + KD       
Sbjct: 308 AEEVTRMVHGEQGLAAAQRITQSLFSGALHEMTEADFAQLAQDGMPTIKLDKD-----AD 362

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           L   +V A    S  +AR  + SNA+ +N    SN +      D        L  GKK++
Sbjct: 363 LQQALVNAELVPSRGQARTMIGSNAVTVNGEKQSNAEYTFTNADRLFGRYTLLRRGKKHY 422

Query: 412 IIC 414
            + 
Sbjct: 423 CLI 425


>gi|317047943|ref|YP_004115591.1| tyrosyl-tRNA synthetase [Pantoea sp. At-9b]
 gi|316949560|gb|ADU69035.1| tyrosyl-tRNA synthetase [Pantoea sp. At-9b]
          Length = 424

 Score =  506 bits (1303), Expect = e-141,   Method: Composition-based stats.
 Identities = 160/425 (37%), Positives = 233/425 (54%), Gaps = 21/425 (4%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG I Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q 
Sbjct: 4   SNLIQQLQERGLIAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQD 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++  ++ + E +EKI+   + F+ +  G   A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTTETVGEWVEKIRHQVAPFLSFDCGDNSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDF 184
            NN  W   +  +  LR+IG  FSVN+M++ E+V+ RL RE Q +S+ EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGGMNVLTFLRDIGKHFSVNQMINKEAVKQRLNREDQGISYTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
            EL K Y   LQ+GGSDQWGNI  GIDL  RL   + + LT PL+T + GTK GKT  GA
Sbjct: 184 AELNKRYGVVLQIGGSDQWGNITSGIDLTRRLHQQQTWGLTVPLITKSDGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI   +   K  G     A+ +
Sbjct: 244 VWLDAKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINALEEQDKNSGTAPR-AQYV 302

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS-----------QHMPTISISKDEVSRGM 350
           +A ++T +VHG      A       F  S+               MPTI++S ++     
Sbjct: 303 LAEQVTRLVHGEAGLTAAKRITESLFSGSLSDMTEADFEQLAQDGMPTINLSAED----- 357

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            L   +VKA    S  +AR  + SNA+ +N    S+ + +    D        L  GKK+
Sbjct: 358 DLQQALVKAELVPSRGQARTMIGSNAVSLNGEKQSDAEYRFSDSDKLFGRFTLLRRGKKH 417

Query: 411 HIICH 415
           + + +
Sbjct: 418 YCLIN 422


>gi|270261633|ref|ZP_06189906.1| tyrosyl-tRNA synthetase [Serratia odorifera 4Rx13]
 gi|270045117|gb|EFA18208.1| tyrosyl-tRNA synthetase [Serratia odorifera 4Rx13]
          Length = 424

 Score =  505 bits (1302), Expect = e-141,   Method: Composition-based stats.
 Identities = 162/424 (38%), Positives = 228/424 (53%), Gaps = 21/424 (4%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q 
Sbjct: 4   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQL 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++  ++ + E +EKI+   S F+ +  G   A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTAETVNEWVEKIRKQVSPFLDFDCGSNSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYDF 184
            NN  W   +  +  LR+IG  FSVN+M++ E+V+ RL R+   +SF EF+Y +LQ +DF
Sbjct: 124 ANNYDWFGGMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDSGISFTEFSYNLLQGFDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
            EL   +   LQ+GGSDQWGNI  GIDL  R+   ++F LT PL+T A GTK GKT  GA
Sbjct: 184 SELYNRHQVELQIGGSDQWGNITSGIDLTRRMHQKQVFGLTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKI 301
           +WL  E TSPY F+Q+W N  DADV  F K  T + + +I   +   K  GK    A+ +
Sbjct: 244 VWLAPEKTSPYKFYQFWINTADADVYRFLKFFTFMSLEDINALEEEDKNSGKAPR-AQYV 302

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS-----------QHMPTISISKDEVSRGM 350
           +A E+T MVHG E    A       F  ++H              MPTI +  D      
Sbjct: 303 LAEEVTGMVHGAEGLAAAKRITQSLFSGALHEMTEADFAQLAQDGMPTIKLDGD-----A 357

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            L   +V A    S  +AR  + SNA+ IN    SN +      D        L  GKK+
Sbjct: 358 DLQQALVNAELVPSRGQARTMIGSNAVTINGEKQSNAEYAFSDSDRLFGRYTLLRRGKKH 417

Query: 411 HIIC 414
           + + 
Sbjct: 418 YCLI 421


>gi|217977779|ref|YP_002361926.1| tyrosyl-tRNA synthetase [Methylocella silvestris BL2]
 gi|254783617|sp|B8EI82|SYY_METSB RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|217503155|gb|ACK50564.1| tyrosyl-tRNA synthetase [Methylocella silvestris BL2]
          Length = 419

 Score =  505 bits (1302), Expect = e-141,   Method: Composition-based stats.
 Identities = 217/413 (52%), Positives = 294/413 (71%), Gaps = 1/413 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           +SDFL  L  RG++HQ S+   +D     G + AYIG+D TA SLH G L Q+M+L WLQ
Sbjct: 8   RSDFLQTLLLRGYVHQCSDLEGIDAKAQSGELVAYIGFDCTAPSLHVGSLVQIMMLRWLQ 67

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           KTG KPI+LMGGGT+ +GDPS +DESR+++  + I+ N   I  +FS FI +G GKT AL
Sbjct: 68  KTGGKPIALMGGGTTQVGDPSGKDESRKILSLETIEANKAGIASVFSKFIAFGDGKTQAL 127

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M++N  WL ++KY+D LR++G  FSVNRM++ +SV+ RL+R+Q LSFLEFNYM LQAYDF
Sbjct: 128 MVDNAEWLTALKYVDFLRDVGRHFSVNRMMAMDSVKLRLERDQELSFLEFNYMCLQAYDF 187

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           VEL + Y C LQMGGSDQWGNI+ G+DLG RL  P+L+ALTSPLLTTASG KMGKT  GA
Sbjct: 188 VELNRRYGCVLQMGGSDQWGNIVTGLDLGRRLGAPQLYALTSPLLTTASGAKMGKTAQGA 247

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WLN++M   +++WQ+WRN +D DV  F K  T LP+ E  R+  L G EINEAKKI+AT
Sbjct: 248 VWLNEDMLPVFDYWQFWRNCEDRDVGRFLKLFTELPLDETVRLESLGGAEINEAKKILAT 307

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E T+M HGRE A  A  AA + F+    ++ +P+I I   E+  G+G+L   VKAG   S
Sbjct: 308 EATSMAHGREAALLAEEAARQTFEEGALAESLPSIDIDAAEIEAGLGVLAAFVKAGLVAS 367

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           T+EARR +K   +++N++ +++E+  ++  D  ++G IKLS G+K H++  L 
Sbjct: 368 TSEARRQIKGGGLRVNDAPVADERAALQQGD-VASGVIKLSLGRKRHVLLKLV 419


>gi|167468642|ref|ZP_02333346.1| tyrosyl-tRNA synthetase [Yersinia pestis FV-1]
          Length = 415

 Score =  505 bits (1302), Expect = e-141,   Method: Composition-based stats.
 Identities = 156/413 (37%), Positives = 226/413 (54%), Gaps = 11/413 (2%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           + ERG + Q+++   L    +QG ++ Y G+D TA SLH GHL  L+ L   Q  GH+P+
Sbjct: 1   MPERGLVAQVTDEDALAERLAQGPISLYCGFDPTADSLHLGHLVPLLCLKRFQLAGHRPV 60

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           +L+GG T +IGDPSF+   R++     + E +EKI+   S F+ +  G+  A+  NN  W
Sbjct: 61  ALVGGATGMIGDPSFKASERKLNTEDTVNEWVEKIRHQVSPFLDFDCGENSAIAANNYDW 120

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYDFVELAKN 190
              +  +  LR+IG  FSVN+M++ E+V+ RL R+   +SF EF+Y +LQAYDF  L KN
Sbjct: 121 FGGMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDSGISFTEFSYNLLQAYDFACLNKN 180

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKE 250
           +   LQ+GGSDQWGNI  GIDL  RL   +++ LT PL+T A GTK GKT  GA+WL+ +
Sbjct: 181 HGVALQIGGSDQWGNITSGIDLTRRLHQQQVYGLTVPLITKADGTKFGKTEGGAVWLDPK 240

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKIIATEIT 307
            TSPY F+Q+W N  DADV  F K  T + + EI   +   K  GK    A+ ++A  +T
Sbjct: 241 KTSPYKFYQFWINTADADVYRFLKFFTFMSLEEINALEEEDKNSGKAPR-AQYVLAENVT 299

Query: 308 TMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTLIVKAGF 361
            MVHG E    A       F   +H         +    +   E++R   L   +V A  
Sbjct: 300 GMVHGPEGLAAAKRITDSLFSGDLHDMTEADFAQLAQDGMPTVELNRDADLQQALVNAEL 359

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
             S  +AR  + SNA+ IN    ++ +      D        L  GKK++ + 
Sbjct: 360 VPSRGQARTMIGSNAVAINGEKQADPEYVFTDADRLFGRYTLLRRGKKHYCLI 412


>gi|170756799|ref|YP_001782947.1| tyrosyl-tRNA synthetase [Clostridium botulinum B1 str. Okra]
 gi|254783587|sp|B1IFG0|SYY_CLOBK RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|169122011|gb|ACA45847.1| tyrosyl-tRNA synthetase [Clostridium botulinum B1 str. Okra]
          Length = 407

 Score =  505 bits (1301), Expect = e-141,   Method: Composition-based stats.
 Identities = 177/407 (43%), Positives = 262/407 (64%), Gaps = 8/407 (1%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+   IL ERG+I Q+++  E+  L  +  ++ YIG+D TA SLH GH  Q+M++  +QK
Sbjct: 2   SNVYDILKERGYIKQLTHEEEIRELLGKEKISFYIGFDPTADSLHVGHFLQMMVMAHMQK 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+PI+L+GGGT +IGDP+ + + R+MM  ++I+ N    K   +  I +   K  A+M
Sbjct: 62  AGHRPIALVGGGTGMIGDPTGKTDMRKMMTKEQIEHNCNCFKKQLAKIIDFSEDK--AIM 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  WL ++ YI+ LREIG  FSVN+ML+ E  +SRL  E+ LSFLEFNYM++Q YDF+
Sbjct: 120 VNNADWLLNLNYIEFLREIGVHFSVNKMLTAECFKSRL--EKGLSFLEFNYMLMQGYDFL 177

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           EL + Y+C +++GG DQW NI+ G+DL  R ++   + +T  LLT + G KMGKT SGA+
Sbjct: 178 ELNRKYNCVMELGGDDQWSNILAGVDLIRRKESKSAYGMTFTLLTNSEGKKMGKTESGAL 237

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
           WL+ E TSPY F+QYWRN+ DADV    + +T LPM E+ R++ L+G EINEAKK++A E
Sbjct: 238 WLDPEKTSPYEFYQYWRNVADADVEKCLRLITFLPMDEVRRLSSLEGAEINEAKKVLAFE 297

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHS-QHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           +T ++HG EEA+KA  AA   F  +     +MPT  I K++++  +  L    K     S
Sbjct: 298 VTKLIHGEEEAQKAKIAAEALFGGNAKDLGNMPTAYIDKNDLNNLLVDLLA--KCEIFPS 355

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
            +EARR +K   + +N+  +++  L +  +     G I +  GKKN 
Sbjct: 356 KSEARRLIKQGGLYLNDEKVTDMNLVVTEEHVTEDG-IMIRRGKKNF 401


>gi|157370459|ref|YP_001478448.1| tyrosyl-tRNA synthetase [Serratia proteamaculans 568]
 gi|189029771|sp|A8GDY0|SYY_SERP5 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|157322223|gb|ABV41320.1| tyrosyl-tRNA synthetase [Serratia proteamaculans 568]
          Length = 424

 Score =  505 bits (1301), Expect = e-141,   Method: Composition-based stats.
 Identities = 162/424 (38%), Positives = 229/424 (54%), Gaps = 21/424 (4%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q 
Sbjct: 4   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQL 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++  ++ + E ++KI+   S F+ +  G   A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTTETVNEWVDKIRKQVSPFLDFDCGSNSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYDF 184
            NN  W   +  +  LR+IG  FSVN+M++ E+V+ RL R+   +SF EF+Y +LQ +DF
Sbjct: 124 ANNYDWFGGMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDSGISFTEFSYNLLQGFDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
            EL   +   LQ+GGSDQWGNI  GIDL  R+   ++F LT PL+T A GTK GKT  GA
Sbjct: 184 SELYNRHQVELQIGGSDQWGNITSGIDLTRRMHQQQVFGLTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKI 301
           +WL  E TSPY F+Q+W N  DADV  F K  T + ++EI   +   K  GK    A+ +
Sbjct: 244 VWLAPEKTSPYKFYQFWINTADADVYRFLKFFTFMDLAEINALEEEDKNSGKAPR-AQYV 302

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS-----------QHMPTISISKDEVSRGM 350
           +A E+T MVHG E    A       F  ++H              MPTI +  D      
Sbjct: 303 LAEEVTGMVHGAEGLAAAKRITQSLFSGALHEMTEADFAQLAQDGMPTIKLDGD-----A 357

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            L   +V A    S  +AR  + SNA+ IN    SN +      D        L  GKK+
Sbjct: 358 DLQQALVNAELVPSRGQARTMIGSNAVTINGEKQSNAEYNFSDADRLFGRYTLLRRGKKH 417

Query: 411 HIIC 414
           + + 
Sbjct: 418 YCLV 421


>gi|259418862|ref|ZP_05742779.1| tyrosyl-tRNA synthetase [Silicibacter sp. TrichCH4B]
 gi|259345084|gb|EEW56938.1| tyrosyl-tRNA synthetase [Silicibacter sp. TrichCH4B]
          Length = 415

 Score =  505 bits (1301), Expect = e-141,   Method: Composition-based stats.
 Identities = 220/414 (53%), Positives = 288/414 (69%), Gaps = 4/414 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KSDF++I+ ERGF+   ++ + LD     G  TAYIGYD TA SLH GHL  +M+L WLQ
Sbjct: 6   KSDFIAIMMERGFLADCTDYQGLDEALVSGTQTAYIGYDATAQSLHVGHLLNIMMLRWLQ 65

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           KTGH+PI+LMGGGT+ +GDPSFR + R ++  ++I  NI  ++ +F+ ++ Y  G+T A+
Sbjct: 66  KTGHRPITLMGGGTTKVGDPSFRSDERPLLGPEQIDANIAGMQKVFAKYLDY--GETGAM 123

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           MLNN  WL  + Y++ LR+IG  FSVNRMLSFESV+SRL REQSLSFLEFNYMILQAYDF
Sbjct: 124 MLNNAEWLDGLNYLEFLRDIGRHFSVNRMLSFESVKSRLDREQSLSFLEFNYMILQAYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL + Y C LQMGGSDQWGNI+ GIDL  R+   ++F LTSPLLTT+ G KMGK+  GA
Sbjct: 184 LELNRRYGCVLQMGGSDQWGNIVNGIDLTRRVLDHEIFGLTSPLLTTSDGRKMGKSQGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           IWLN EM SPY FWQ+WRN  DADV  F K  T LP++E DR+  LQG EINE K I+A 
Sbjct: 244 IWLNDEMLSPYEFWQFWRNTTDADVGRFLKLYTELPVAECDRLGALQGSEINEGKIILAN 303

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E+T+++HG E A+ A   A E F+       +PT+S+S  E+  GM ++ +IVK+G A S
Sbjct: 304 EVTSLLHGAEAAKAAEATAREVFEKGGVGDDLPTLSLSAAELGEGMSIVQIIVKSGLAKS 363

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLCG 418
             EA+R +  N  ++N++ +++  L I      S   IKLS GKK H +  L G
Sbjct: 364 GKEAKRLISENGARLNDAPLTDAGLMIDAAALASP--IKLSAGKKRHALVQLDG 415


>gi|114765966|ref|ZP_01444980.1| tyrosyl-tRNA synthetase [Pelagibaca bermudensis HTCC2601]
 gi|114541780|gb|EAU44818.1| tyrosyl-tRNA synthetase [Roseovarius sp. HTCC2601]
          Length = 417

 Score =  505 bits (1301), Expect = e-141,   Method: Composition-based stats.
 Identities = 216/413 (52%), Positives = 286/413 (69%), Gaps = 3/413 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KSDF+ ++ ERG++   ++ + LD   S+GVVTAYIGYD TA SLH GHL  +M+L WLQ
Sbjct: 6   KSDFMRVMIERGYLADCTDYQGLDEALSKGVVTAYIGYDATAKSLHVGHLLNIMMLRWLQ 65

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           KTGH+PI+LMGGGT+ +GDPSFR + R ++   +I +NIE +K +F+ ++ Y   +T AL
Sbjct: 66  KTGHQPITLMGGGTTKVGDPSFRADERPLLTPGQIDDNIEGMKQVFAKYLDYDRAETPAL 125

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           MLNN  WL  + Y++ LR+IG  FSVNRMLSFESV+SRL REQSLSFLEFNYMILQAYDF
Sbjct: 126 MLNNAEWLDGLNYLEFLRDIGRHFSVNRMLSFESVKSRLDREQSLSFLEFNYMILQAYDF 185

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL + Y C LQMGGSDQWGNI+ GIDL  R+   +++ LTSPLLTT+ G KMGK+  GA
Sbjct: 186 LELNRRYGCLLQMGGSDQWGNIVNGIDLTRRVLDNEIYGLTSPLLTTSDGRKMGKSQGGA 245

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WLN +M SPY FWQ+WRN  DADV  F K  T LP+ E DR+  L G EIN AK I+A 
Sbjct: 246 MWLNADMLSPYEFWQFWRNSTDADVGRFLKLYTELPVEECDRLGALSGSEINAAKIILAN 305

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV-SRGMGLLTLIVKAGFAT 363
           E+TT+ HG E A  A   A E F+       +PT+ +S +E+   G+ ++ LIV+AG A 
Sbjct: 306 EVTTLCHGAEAATAAEATAREVFEKGGVGDDLPTLELSAEELGGEGISIVQLIVRAGLAK 365

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           S  EA+R +  N  +I+++ +++  L +      S   +KLS GKK H +  L
Sbjct: 366 SGKEAKRLIAENGARIDDAPLTDAGLMLDAAALASP--VKLSAGKKRHALVKL 416


>gi|320160179|ref|YP_004173403.1| tyrosyl-tRNA synthetase [Anaerolinea thermophila UNI-1]
 gi|319994032|dbj|BAJ62803.1| tyrosyl-tRNA synthetase [Anaerolinea thermophila UNI-1]
          Length = 426

 Score =  505 bits (1301), Expect = e-141,   Method: Composition-based stats.
 Identities = 150/423 (35%), Positives = 232/423 (54%), Gaps = 15/423 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L  RG I        +  L ++  VT Y G+D TA SLH GH   L+ L  LQ+ 
Sbjct: 4   NAFEELQWRGLIFDYM--EGVPELLAKEKVTVYNGFDPTADSLHVGHTLPLIALARLQRF 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH PI++ GGGT +IGDPS +   R+++  ++I+ N+  I+   +  + +      A ++
Sbjct: 62  GHTPIAVAGGGTGMIGDPSGKSSERQLLSREQIEYNVSCIQKQLAHLLDFEVKSNPARLV 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  +  +D LR+IG  F+VN ML+ +SV+SR+ RE+ +SF EF+YM+LQ+YDF+ 
Sbjct: 122 NNADWLLKLNLVDFLRDIGKHFTVNYMLAKDSVKSRIDREEGISFTEFSYMLLQSYDFLH 181

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L   + C+LQ GGSDQWGNI  G +L  R++  + + +   L+T A GTK GKT SG++W
Sbjct: 182 LYDTFGCKLQTGGSDQWGNITAGAELIRRVRGGQAYGMVYHLITKADGTKFGKTESGSVW 241

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIAT 304
           L+   TSPY F+Q+W N DD DVV + K  T     EI  +     +  E  E  + +A 
Sbjct: 242 LDPNKTSPYRFYQFWLNTDDRDVVKYLKYFTFFTREEIAELEASLAERPEQREPHRALAR 301

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVS-RGMGLL 353
            +T M+HG     +A  A+   F   + +            +P+  + + ++   G  L+
Sbjct: 302 AMTQMIHGETALARAEQASQALFGGELETLTAAEIADIFSEVPSCEVPRHQLEGEGYPLV 361

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            L+V AG A S  EARR+++   I +NN  + +    + LQD      + L  G+KN+ +
Sbjct: 362 DLLVTAGVAKSKGEARRNIQEGGIYVNNRRVEDLNRAVHLQDALQGQFVVLRKGRKNYTL 421

Query: 414 CHL 416
             L
Sbjct: 422 VRL 424


>gi|152977028|ref|YP_001376545.1| tyrosyl-tRNA synthetase [Bacillus cereus subsp. cytotoxis NVH
           391-98]
 gi|152025780|gb|ABS23550.1| tyrosyl-tRNA synthetase [Bacillus cytotoxicus NVH 391-98]
          Length = 418

 Score =  505 bits (1301), Expect = e-141,   Method: Composition-based stats.
 Identities = 159/418 (38%), Positives = 232/418 (55%), Gaps = 11/418 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + L  L  RG I+Q ++   L+ L  +  V  Y G+D TA SLH GH+  +++L   Q  
Sbjct: 2   NILQDLEFRGLINQQTDAEGLEQLLEKESVKLYCGFDPTADSLHIGHMLPILMLRRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI+L+GGGT +IGDPS +   R +     +    E IK   S+F+++   +  A+M 
Sbjct: 62  GHQPIALVGGGTGMIGDPSGKKAERTLNTKDTVAYYTESIKKQLSNFLEFENVENPAVMA 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL ++  I  LR+IG  F +N ML+ ++V SRL  E  +SF EF+YMILQ+YDF+ 
Sbjct: 122 NNYDWLGNLDVITFLRDIGKNFGLNYMLAKDTVASRL--ETGISFTEFSYMILQSYDFLN 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGER-LKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           L KN+ CRLQ+GGSDQWGNI  G++L  +  +  K F LT PL+T + GTK GKT  GA+
Sbjct: 180 LYKNHGCRLQIGGSDQWGNITAGLELIRKSEEDAKAFGLTIPLVTKSDGTKFGKTEGGAV 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIA 303
           WL+ E T+PY F+Q+W N DD DVV + K  T L   EI  + K   +  E   A+K +A
Sbjct: 240 WLDPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLSHEEILDLEKQVAEAPEKRVAQKALA 299

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRGMGLLTLIV 357
           +E+T +VHG E  E+A   +   F  S+       I        S D  +   GL+ L+V
Sbjct: 300 SEMTKLVHGEEALEQAIKISAALFSGSVAELTADEIEQGFKDVPSVDRSAEDTGLIDLLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           ++  + S  +AR  + + AI IN          +  +D        +  GKK + +  
Sbjct: 360 ESKISPSKRQAREDVTNGAIYINGERTQELDYVVTEKDRIEGKFTIIRRGKKKYFLIR 417


>gi|254474897|ref|ZP_05088283.1| tyrosyl-tRNA synthetase [Ruegeria sp. R11]
 gi|214029140|gb|EEB69975.1| tyrosyl-tRNA synthetase [Ruegeria sp. R11]
          Length = 418

 Score =  505 bits (1301), Expect = e-141,   Method: Composition-based stats.
 Identities = 214/415 (51%), Positives = 284/415 (68%), Gaps = 3/415 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KSDF+S++ ERG++   ++ + LD        +AYIG+D TA+SLH G L Q+M+L W Q
Sbjct: 6   KSDFISVMMERGYLADCTDYQGLDEALMTPGQSAYIGFDATATSLHVGSLIQIMMLRWFQ 65

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG-KTDA 123
           KTGHKPI+LMGGGT+ +GDPSFR + R ++   +I  NI  IK +F+++I Y TG +  A
Sbjct: 66  KTGHKPITLMGGGTTKVGDPSFRADERPLLTDDQIDSNIAGIKKVFAAYIDYDTGAENSA 125

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           +MLNN  WL  + Y+  LR+IG  FSVNRMLSFESV+SRL REQSLSFLEFNYMILQAYD
Sbjct: 126 MMLNNAEWLDDLNYLTFLRDIGRHFSVNRMLSFESVKSRLDREQSLSFLEFNYMILQAYD 185

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+EL + Y C LQMGGSDQWGNI+ GIDL  R+   +++ LTSPLLTT+ G KMGK+ +G
Sbjct: 186 FLELNRRYGCVLQMGGSDQWGNIVNGIDLTRRVLDHEIYGLTSPLLTTSDGKKMGKSQNG 245

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIA 303
           AIWLN +M SPY FWQ+WRN  DADV  F K  T LP+ E +R+  L+G E+N AK I+A
Sbjct: 246 AIWLNSDMLSPYEFWQFWRNTTDADVGRFLKLYTELPVDECNRLGALEGSEVNAAKVILA 305

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
            E+T ++HGR  AE A   A E F+       +PT+S+S  ++  G+ ++ LIVK+G A 
Sbjct: 306 NEVTALLHGRAAAEAAEATAREVFEKGGVGDDLPTLSLSSADLGDGISIVQLIVKSGLAK 365

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLCG 418
           S  +A+R +  N  KI++  +++  L I      S   IKLS GKK H +  L G
Sbjct: 366 SGKDAKRLIAENGAKIDDKPLTDAGLMIDAAALASP--IKLSAGKKRHALVQLDG 418


>gi|119960707|ref|YP_947409.1| tyrosyl-tRNA synthetase [Arthrobacter aurescens TC1]
 gi|119947566|gb|ABM06477.1| tyrosyl-tRNA synthetase [Arthrobacter aurescens TC1]
          Length = 436

 Score =  505 bits (1300), Expect = e-141,   Method: Composition-based stats.
 Identities = 149/425 (35%), Positives = 231/425 (54%), Gaps = 12/425 (2%)

Query: 2   PAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
           PAF ++    L  RG +H  ++  EL+ L +   +T Y G+D TA SLH G+L QL+++ 
Sbjct: 14  PAF-ANVWQELKWRGLVHVSTDETELEKLLAGDPITYYCGFDPTAPSLHLGNLVQLLVMR 72

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKT 121
            LQ  GHKP+ L+GG T +IGDP      R +     + E +  ++G    F+ +  G+ 
Sbjct: 73  RLQLAGHKPLGLVGGSTGLIGDPRP-TAERTLNTKDTVAEWVGYLQGQVRRFLSF-EGEN 130

Query: 122 DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA 181
            A M+NN  W   +  ID LREIG  F V  ML  ++V SRL  ++ +S+ EF+Y ILQ 
Sbjct: 131 PARMVNNLDWTAPLSAIDFLREIGKHFRVGTMLRKDAVASRLSSDEGISYTEFSYQILQG 190

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            D+++L ++Y C LQ GGSDQWGN+  G +L  +++   + AL +PL+T + GTK GK+ 
Sbjct: 191 MDYLQLFRDYGCALQTGGSDQWGNLTSGTELIRKVEGKSVHALGTPLITNSDGTKFGKSE 250

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAK 299
             AIWL+ +M SPY F+Q+W N  DADVV   K  T L  +EI+    A  +     E +
Sbjct: 251 GNAIWLDPDMCSPYTFYQFWLNTADADVVDRLKVFTFLSRAEIEALGQAVEERPFAREGQ 310

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEV-SRGMGL 352
           K +A E+T++VHG +  EK   A+   F     +          T  +    + + G+G+
Sbjct: 311 KKLAFEVTSLVHGVDATEKVIAASAALFGNGDLAVLDERTLEAATAELPSATIGADGLGI 370

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           + L+V +G + S + ARR +      +NN+ +S+    I  ++      + L  GKKN  
Sbjct: 371 IDLLVASGLSDSKSAARRTVGEGGAYVNNTKVSDPDAVIAREELLHGRYLLLRRGKKNLA 430

Query: 413 ICHLC 417
              + 
Sbjct: 431 TIEVS 435


>gi|220921862|ref|YP_002497163.1| tyrosyl-tRNA synthetase [Methylobacterium nodulans ORS 2060]
 gi|219946468|gb|ACL56860.1| tyrosyl-tRNA synthetase [Methylobacterium nodulans ORS 2060]
          Length = 424

 Score =  505 bits (1300), Expect = e-141,   Method: Composition-based stats.
 Identities = 220/415 (53%), Positives = 298/415 (71%), Gaps = 2/415 (0%)

Query: 3   AFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
           A +SDFL +L ERG++HQ S+   +D    +G +TAY+GYD TA SLH GHL  +M+L W
Sbjct: 8   APRSDFLKVLFERGYVHQCSDFAGVDAAAREGRLTAYVGYDCTAPSLHIGHLLSIMMLHW 67

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD 122
           LQ TG KP++LMGGGT+ +GDPS RDESR+++  ++I  N  +I+  F+ F+++G    D
Sbjct: 68  LQATGGKPLALMGGGTTRVGDPSGRDESRKILTLEQIDANKAEIRKTFTRFLRFGKDLRD 127

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
           A+M +N  WL  + YI++LR+IG  FSVNRMLS +SVR RL+R+Q LSFLEFNYMILQAY
Sbjct: 128 AIMADNAEWLTQLNYIEMLRDIGRHFSVNRMLSMDSVRLRLERDQELSFLEFNYMILQAY 187

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DFVEL + Y   LQMGGSDQWGNII GIDLG RL TP+L ALT PL+TTASG KMGKT S
Sbjct: 188 DFVELNRRYGVTLQMGGSDQWGNIITGIDLGRRLGTPQLHALTCPLMTTASGAKMGKTAS 247

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKII 302
           GA+WLN +M SP+++WQ+WRN +DADV  F +  T LP+ EIDR+A L G EINEAKK++
Sbjct: 248 GAVWLNPDMLSPWDYWQFWRNTEDADVGRFLRLFTLLPLDEIDRLAALGGAEINEAKKVL 307

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLI--VKAG 360
           ATE T ++HGRE AE AA  A   F+     + +PT+ + +  ++ G+G+LT      A 
Sbjct: 308 ATEATALLHGREAAEAAAETARRTFEEGAAPETLPTVEVPRALLAGGLGVLTAFGPDHAK 367

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
              ST+EARR ++S  +K+N++ +++E+  +   D  + G IKLSFG+K H++  
Sbjct: 368 LLPSTSEARRQVRSGGLKVNDAAVTDERAVLGEADLTADGVIKLSFGRKKHVLLR 422


>gi|188533925|ref|YP_001907722.1| tyrosyl-tRNA synthetase [Erwinia tasmaniensis Et1/99]
 gi|254783606|sp|B2VEN3|SYY_ERWT9 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|188028967|emb|CAO96833.1| Tyrosyl-tRNA synthetase [Erwinia tasmaniensis Et1/99]
          Length = 425

 Score =  505 bits (1300), Expect = e-141,   Method: Composition-based stats.
 Identities = 156/419 (37%), Positives = 231/419 (55%), Gaps = 11/419 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q 
Sbjct: 4   SNLIKQLQERGLVAQVTDENALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQD 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++  S+ + + +EKI+   + F+ +  G   A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTSETVNQWVEKIRQQVAPFLSFNCGDNSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDF 184
            NN  W  S+  +  LR+IG  FSVN+M++ E+V+ RL R +Q +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGSMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDQGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L + Y   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  GA
Sbjct: 184 ACLNERYGVALQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKSDGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKI 301
           +WL+   TSPY F+Q+W N  DADV  F K  T + + EI   +   K  GK    A+ +
Sbjct: 244 VWLDAAKTSPYKFYQFWINTADADVYRFLKFFTFMSLEEINQLEEEDKSSGKAPR-AQGV 302

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTL 355
           +A  +T +VHG E    A       F  ++          +    +   E+  G  L   
Sbjct: 303 LAELVTRLVHGEEGLIAAQRITRSLFAGNVTELTANDLSQLAQDGMPGIELKIGQDLQQA 362

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +V A  A S  +AR+ +++ ++ IN S+ ++ +      D        L  GKKN+ + 
Sbjct: 363 LVNAELAPSRGQARKLIEAKSVSINGSLQTDAEYTFGEDDRLFGQYTLLRRGKKNYSLI 421


>gi|168335294|ref|ZP_02693393.1| tyrosyl-tRNA synthetase [Epulopiscium sp. 'N.t. morphotype B']
          Length = 410

 Score =  505 bits (1300), Expect = e-141,   Method: Composition-based stats.
 Identities = 184/412 (44%), Positives = 264/412 (64%), Gaps = 5/412 (1%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +   IL ERGFI Q ++  EL  L     +T YIG+D TA SLH GH   +M +  +Q  
Sbjct: 2   NVFDILEERGFIQQTTHKEELRQLLENEKITFYIGFDPTADSLHVGHFVTIMAMRHMQMA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI+LMGGGT +IGDPS + + R+MM  + I EN+   K  FS FI +   K  A++ 
Sbjct: 62  GHRPIALMGGGTGMIGDPSGKTDMRKMMSIETINENVNCFKKQFSRFIDFDNDK--AIIA 119

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL ++ YI+LLRE+G  FSVNRML+FE  + R+  E+ LSFLEFNYMI+Q+YDF+E
Sbjct: 120 NNADWLMNLNYIELLREVGVHFSVNRMLTFECFKQRM--EKGLSFLEFNYMIMQSYDFLE 177

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + Y+C+L++GG+DQW NI+ G++L  RL     F +T  LL  + G KMGKT++GA+W
Sbjct: 178 LYRRYNCKLELGGNDQWSNILGGVELVRRLHGDTAFGMTFTLLANSEGQKMGKTVNGALW 237

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           L+K  TSPY F+QYWRN+DD+DV      LT LPM E++ ++ L+G  IN+AK+I+A E+
Sbjct: 238 LDKNKTSPYEFYQYWRNVDDSDVKMCLSLLTFLPMDEVNHLSSLEGANINKAKEILAYEV 297

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVK-AGFATST 365
           T +VHG+E+A +A TAA   F        +PT +I++ ++++G+ +++L+V     A S 
Sbjct: 298 TKIVHGQEDAIQAQTAAKAAFSGGAAKGSLPTTNITQTQLNQGIDIISLLVDLTKLAPSK 357

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            EARR +  N IK+    IS+ K  I    F+      +  GKK     +L 
Sbjct: 358 GEARRLITQNGIKLEGKTISDIKFIITKDLFNQNNAFMIQKGKKVFHQINLT 409


>gi|331091728|ref|ZP_08340562.1| tyrosyl-tRNA synthetase [Lachnospiraceae bacterium 2_1_46FAA]
 gi|330403485|gb|EGG83044.1| tyrosyl-tRNA synthetase [Lachnospiraceae bacterium 2_1_46FAA]
          Length = 407

 Score =  505 bits (1300), Expect = e-141,   Method: Composition-based stats.
 Identities = 180/411 (43%), Positives = 251/411 (61%), Gaps = 9/411 (2%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG I Q+++   +  L ++G  T YIG+D TA SLH GH   L L+  LQ  G
Sbjct: 3   IYDELKARGLIAQVTDEELISNLVNEGKATFYIGFDPTADSLHVGHFMALCLMKRLQMAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           +KPI+L+GGGT  IGDPS R + R MM  ++IQ N +  K   S FI +  GK  ALM+N
Sbjct: 63  NKPIALLGGGTGYIGDPSGRSDMRSMMTPEQIQHNCDCFKKQMSKFIDFSEGK--ALMIN 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  + Y++LLRE+G  FSVNRML+ E  + R+  E+ LSFLEFNYMI+QAYDF  L
Sbjct: 121 NADWLLGLNYVELLREVGPHFSVNRMLTAECYKQRM--EKGLSFLEFNYMIMQAYDFYAL 178

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            +NY C LQ GG DQW N++ G +L  R       A+T  LL  + G KMGKT SGA+WL
Sbjct: 179 YQNYGCNLQFGGDDQWSNMLAGTELIRRKLGKDASAMTITLLLNSEGKKMGKTQSGAVWL 238

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           +   TSP+ F+QYWRN+ D DV+   + LT LP+ EID M K +G ++N+AK+I+A E+T
Sbjct: 239 DPNKTSPFEFYQYWRNVADNDVLKCIRMLTFLPLEEIDEMDKWEGSQLNKAKEILAFELT 298

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTN 366
            +VHG EEA KA  ++ E F     + +MPT  + + +   G + +LT++VK+G   S +
Sbjct: 299 KLVHGEEEALKAQESSRELFTSGAAA-NMPTAELEEGDFVEGKIDILTMLVKSGLVPSKS 357

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH--IICH 415
           EARR ++   + ++   + + K +    D    G + L  GKKN   +I  
Sbjct: 358 EARRAVQQGGVAVDGEKVEDIKKEYAKDDLSGEG-VVLRRGKKNFRKVIVK 407


>gi|284007966|emb|CBA73966.1| tyrosyl-tRNA synthetase [Arsenophonus nasoniae]
          Length = 429

 Score =  505 bits (1300), Expect = e-141,   Method: Composition-based stats.
 Identities = 156/420 (37%), Positives = 239/420 (56%), Gaps = 11/420 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
            + +  L ERG I Q+++ + L    SQG VT Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 9   KNLIEQLQERGLIAQLTDEKALIEKLSQGSVTLYCGFDPTADSLHLGHLVPLLCLKRFQQ 68

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+P++L+GG T +IGDPSF+   R++  S+ +Q+ +EKI+   S F+ +  G   A +
Sbjct: 69  MGHQPVALVGGATGLIGDPSFKATERKLNTSETVQQWVEKIRQQVSPFLDFDCGNNSAKV 128

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYDF 184
           +NN  W   +  +  LR+IG  FSVN+M++ E+V+ RL+R+   +SF EF+Y +LQ+YDF
Sbjct: 129 VNNYDWFGQMDVLTFLRDIGKHFSVNQMINKEAVKQRLERDDAGISFTEFSYNLLQSYDF 188

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L   ++  LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT +GA
Sbjct: 189 ANLCYQHNVELQIGGSDQWGNITSGIDLTRRLFQKQVFGLTVPLITKSDGTKFGKTEAGA 248

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID---RMAKLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T +P+ EID      +  GK    A+ +
Sbjct: 249 VWLDPQKTSPYKFYQFWVNTADADVYRFLKFFTFMPIEEIDALQEEDQNSGKAPR-AQYV 307

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTL 355
           +A ++T +VHG E  + A       F  +I +        +    +   +++ G  L   
Sbjct: 308 LAEKVTQLVHGDEGLQAAKRITESLFSDTIAALTAADFAQLAQDGMPMIKLNSGADLQQA 367

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +V+A    S  +AR  + S A+ IN     + +     +D        +  GKK++ + +
Sbjct: 368 LVEAKLVPSRGQARTMISSKAVAINGEKCVDPEYIFTAEDRLFGRYSLIRRGKKHYCLVN 427


>gi|84515615|ref|ZP_01002977.1| tyrosyl-tRNA synthetase [Loktanella vestfoldensis SKA53]
 gi|84510898|gb|EAQ07353.1| tyrosyl-tRNA synthetase [Loktanella vestfoldensis SKA53]
          Length = 416

 Score =  504 bits (1299), Expect = e-140,   Method: Composition-based stats.
 Identities = 214/412 (51%), Positives = 283/412 (68%), Gaps = 2/412 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KSDF+S++ ERGF+   ++ + LD   S+GVVT YIGYD TA SLH GHL  +M+L WLQ
Sbjct: 6   KSDFMSVMMERGFLADCTDYQGLDDALSRGVVTTYIGYDATAKSLHVGHLLNIMMLRWLQ 65

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           KTGH+PI+LMGGGT+ +GDPSFR + R ++ + +I  NI  ++ +F+ ++ YG G TDAL
Sbjct: 66  KTGHQPITLMGGGTTKVGDPSFRADERPLLTADQIDANIAGMQQVFAKYLTYGDGPTDAL 125

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           MLNN  WL  + Y+D LR+IG  FSVNRML+FESV+SRL REQSLSFLEFNYMILQAYDF
Sbjct: 126 MLNNAEWLDQLNYLDFLRDIGRHFSVNRMLAFESVKSRLDREQSLSFLEFNYMILQAYDF 185

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL + Y C LQMGGSDQWGNII GIDL  R+   +++ LTSPLLTT+ G KMGK+  GA
Sbjct: 186 LELNRRYGCLLQMGGSDQWGNIINGIDLTRRVLDHEIYGLTSPLLTTSDGRKMGKSAGGA 245

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WLN +M SPY FWQ+WRN  DAD   F K  T LP+ E +R+  LQG +IN AK I+A 
Sbjct: 246 VWLNADMLSPYEFWQFWRNTTDADTGRFLKLYTELPLDECNRLGALQGSDINAAKIILAN 305

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E+T ++HG E A  A   A E F+       +PT+++   E+  GM +  +IV+AG A +
Sbjct: 306 EVTALLHGAEAATTAEATAREVFEKGGVGDDLPTLTLGAAELGDGMSIAQIIVRAGLAAT 365

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             EA+R +  N  ++N+  +++  L +          IKLS GKK H +  L
Sbjct: 366 GKEAKRLIAENGARLNDEPLTDAGLMVDATMLAQP--IKLSAGKKRHALVQL 415


>gi|183598880|ref|ZP_02960373.1| hypothetical protein PROSTU_02315 [Providencia stuartii ATCC 25827]
 gi|188021088|gb|EDU59128.1| hypothetical protein PROSTU_02315 [Providencia stuartii ATCC 25827]
          Length = 424

 Score =  504 bits (1299), Expect = e-140,   Method: Composition-based stats.
 Identities = 152/415 (36%), Positives = 226/415 (54%), Gaps = 11/415 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           ++ +  L ERG + Q+++   L    +QG ++ Y G+D TA SLH GHL  L+ L   Q 
Sbjct: 4   NNLIKQLQERGLVAQVTDEDALAERLAQGPISLYCGFDPTADSLHLGHLVPLLCLKRFQL 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++  ++ +QE +EKI+   S F+ +  G   A +
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKASERKLNTAETVQEWVEKIRNQVSPFLSFDCGDNSAKL 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYDF 184
            NN  W   +  +  LR+IG  FSVN+M++ E+V+ RL R+   +SF EF Y +LQ YDF
Sbjct: 124 ANNYDWFGKMDVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDVGISFTEFAYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K +   LQ+GGSDQWGNI  GIDL  RL   ++F +T PL+T + GTK GKT  GA
Sbjct: 184 ANLNKEHGVELQIGGSDQWGNITSGIDLTRRLNQNQVFGMTVPLITKSDGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ---GKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + +SEID + +     GK    A+ +
Sbjct: 244 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMELSEIDALEEEDKNSGKAPR-AQYV 302

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTL 355
           +A  +T +VHG E    A       F  ++        + +    +    +  G  L   
Sbjct: 303 LAENVTRLVHGEEGLAAARRITESLFSGAVSDLTEADFEQLAQDGMPCITLENGADLQQA 362

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
           +V +    S  +AR  + SNA+ +N    ++        D        +  GKKN
Sbjct: 363 LVDSELTPSRGQARTAISSNAVAVNGQKQTDPMYVFSDSDRLFGRFTLIRRGKKN 417


>gi|153939380|ref|YP_001392669.1| tyrosyl-tRNA synthetase [Clostridium botulinum F str. Langeland]
 gi|168179027|ref|ZP_02613691.1| tyrosyl-tRNA synthetase [Clostridium botulinum NCTC 2916]
 gi|226950749|ref|YP_002805840.1| tyrosine--tRNA ligase [Clostridium botulinum A2 str. Kyoto]
 gi|254783586|sp|C1FLY1|SYY_CLOBJ RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|254783588|sp|A7GIQ9|SYY_CLOBL RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|152935276|gb|ABS40774.1| tyrosine--tRNA ligase [Clostridium botulinum F str. Langeland]
 gi|182670125|gb|EDT82101.1| tyrosyl-tRNA synthetase [Clostridium botulinum NCTC 2916]
 gi|226840771|gb|ACO83437.1| tyrosine--tRNA ligase [Clostridium botulinum A2 str. Kyoto]
 gi|295320653|gb|ADG01031.1| tyrosine--tRNA ligase [Clostridium botulinum F str. 230613]
 gi|322807631|emb|CBZ05206.1| tyrosyl-tRNA synthetase [Clostridium botulinum H04402 065]
          Length = 407

 Score =  504 bits (1298), Expect = e-140,   Method: Composition-based stats.
 Identities = 178/407 (43%), Positives = 263/407 (64%), Gaps = 8/407 (1%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+   IL ERG+I Q+++  E+  L  +  ++ YIG+D TA SLH GH  Q+M++  +QK
Sbjct: 2   SNVYDILKERGYIKQLTHEEEIRELLGKEKISFYIGFDPTADSLHVGHFLQMMVMAHMQK 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+PI+L+GGGT +IGDP+ + + R+MM  ++I+ N    K   +  I +   K  A+M
Sbjct: 62  AGHRPIALVGGGTGMIGDPTGKTDMRKMMTKEQIEHNCNCFKKQLAKIIDFSEDK--AIM 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  WL ++ YI+ LREIG  FSVN+ML+ E  +SRL  E+ LSFLEFNYM++Q YDF+
Sbjct: 120 VNNADWLLNLNYIEFLREIGVHFSVNKMLTAECFKSRL--EKGLSFLEFNYMLMQGYDFL 177

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           EL + Y+C +++GG DQW NI+ G+DL  R ++   + +T  LLT + G KMGKT SGA+
Sbjct: 178 ELNRKYNCVMELGGDDQWSNILAGVDLIRRKESKSAYGMTFTLLTNSEGKKMGKTESGAL 237

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
           WL+ E TSPY F+QYWRN+ DADV    + +T LPM E+ R++ L+G EINEAKK++A E
Sbjct: 238 WLDPEKTSPYEFYQYWRNVADADVEKCLRLITFLPMDEVRRLSSLEGAEINEAKKVLAFE 297

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHS-QHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           +T ++HG EEA+KA  AA   F  +     +MPT  I K++++  +  L   VK     S
Sbjct: 298 VTKLIHGEEEAQKAKIAAEALFGGNAKDLGNMPTAYIDKNDLNNLLVDLL--VKCEIFPS 355

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
            +EARR +K   + +N+  +++  L +  +     G I +  GKKN 
Sbjct: 356 KSEARRLIKQGGLYLNDEKVTDMNLVVTEEHVTEDG-IMIRRGKKNF 401


>gi|154505518|ref|ZP_02042256.1| hypothetical protein RUMGNA_03055 [Ruminococcus gnavus ATCC 29149]
 gi|153794176|gb|EDN76596.1| hypothetical protein RUMGNA_03055 [Ruminococcus gnavus ATCC 29149]
          Length = 410

 Score =  504 bits (1298), Expect = e-140,   Method: Composition-based stats.
 Identities = 178/414 (42%), Positives = 252/414 (60%), Gaps = 9/414 (2%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           K      L  RG I Q+++   +  L ++G  T YIG+D TA SLH GH   L L+  LQ
Sbjct: 3   KMQIYDELKARGLIAQVTDEERISKLVNEGKATFYIGFDPTADSLHVGHFMALCLMKRLQ 62

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             G++PI+L+GGGT  IGDPS R + R MM  ++IQ N +  K   S FI +  GK  AL
Sbjct: 63  MAGNRPIALIGGGTGYIGDPSGRTDMRSMMTPEQIQHNCDCFKEQMSKFIDFSEGK--AL 120

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M+NN  WL  + Y++LLRE+G+ FSVNRML+ E  + R+  E+ LSFLEFNYMI+QAYDF
Sbjct: 121 MVNNADWLLDLNYVELLREVGAHFSVNRMLTAECYKQRM--EKGLSFLEFNYMIMQAYDF 178

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L + Y C LQ GG DQW N++ G +L  R       A+T  LL  + G KMGKT SGA
Sbjct: 179 YALYQKYGCNLQFGGDDQWSNMLAGTELIRRKLGEDASAMTITLLLNSEGKKMGKTQSGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WL+   TSP++F+QYWRN+ DADV+   + LT LP+ EID+M   +G ++N AK+I+A 
Sbjct: 239 VWLDPNKTSPFDFYQYWRNVADADVLKCIRMLTFLPLEEIDKMDSWEGAQLNTAKEILAF 298

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFAT 363
           E+T +VHG EEA KA  +A   F     +Q MPT  +++++     + +LTL++K+G   
Sbjct: 299 ELTKLVHGEEEANKAQESARALFSQGNAAQ-MPTAELTEEDFEGNEIDILTLLLKSGLVP 357

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH--IICH 415
           S +EARR ++   +  +   +++       +D  S   I L  GKKN   ++  
Sbjct: 358 SKSEARRAVQQGGVAADGEKVADIHAVFT-KDALSGEGIVLKKGKKNFRKVVVK 410


>gi|312868159|ref|ZP_07728363.1| tyrosine--tRNA ligase [Streptococcus parasanguinis F0405]
 gi|311096563|gb|EFQ54803.1| tyrosine--tRNA ligase [Streptococcus parasanguinis F0405]
          Length = 418

 Score =  504 bits (1298), Expect = e-140,   Method: Composition-based stats.
 Identities = 151/416 (36%), Positives = 226/416 (54%), Gaps = 11/416 (2%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L ERG + Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  G
Sbjct: 3   IFDELKERGLVFQTTDEEALRKALEEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKP +L+GG T +IGDPSF+D  R +   + +QE +  I+G  S F+ +  G   A M+N
Sbjct: 63  HKPYALVGGATGLIGDPSFKDAERSLQTKETVQEWVRSIQGQLSRFLDFENGDNKAEMVN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W  SI +ID LR++G +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF  L
Sbjct: 123 NYDWFGSISFIDFLRDVGKYFTVNAMMSKESVKKRI--ETGISYTEFAYQIMQGYDFYVL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            + ++  LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WL
Sbjct: 181 NQEHNVTLQIGGSDQWGNMTAGTELMRRKADKTGHVMTVPLITDATGKKFGKSEGNAVWL 240

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATE 305
           N + TSPY  +Q+W N+ DAD V F K  T L + EI+ + K      +E  A+KI+A E
Sbjct: 241 NADKTSPYEMYQFWMNVMDADAVRFLKIFTFLSLDEIEEIRKQFEAAPHERLAQKILARE 300

Query: 306 ITTMVHGREEAEKAATAAMECFDMSI-------HSQHMPTISISKDEVSRGMGLLTLIVK 358
           + T+VHG E  ++A     + F  +I         Q +  +   + +    + ++ L+V 
Sbjct: 301 VVTLVHGEEAYKEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVQAEDNLNIVELLVT 360

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           AG   S  +AR  +++ AI +N   I +    +   D        +  GKK + + 
Sbjct: 361 AGVVNSKRQAREDVQNGAIYVNGERIQDLDYVLSDSDKLENELTVIRRGKKKYFVL 416


>gi|197302947|ref|ZP_03167998.1| hypothetical protein RUMLAC_01675 [Ruminococcus lactaris ATCC
           29176]
 gi|197298028|gb|EDY32577.1| hypothetical protein RUMLAC_01675 [Ruminococcus lactaris ATCC
           29176]
          Length = 407

 Score =  504 bits (1298), Expect = e-140,   Method: Composition-based stats.
 Identities = 182/409 (44%), Positives = 252/409 (61%), Gaps = 7/409 (1%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
                L  RG I Q+++   +  L + G  T YIG+D TA SLH GH   L L+  LQ+ 
Sbjct: 2   GIYEELQARGLIAQVTDEERIRDLVNNGKATFYIGFDPTADSLHVGHFMALCLMKRLQEA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           G+KPI+L+GGGT  IGDPS R + R MM  ++IQ N +  K   S FI +  GK  ALM+
Sbjct: 62  GNKPIALIGGGTGYIGDPSGRSDMRSMMTPEQIQHNCDCFKKQMSRFIDFSEGK--ALMV 119

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  + YI++LREIG  FSVNRML+ E  + R+  E+ LSFLEFNYMI+QAYDF E
Sbjct: 120 NNADWLLDLNYIEVLREIGPHFSVNRMLTAECYKQRM--EKGLSFLEFNYMIMQAYDFYE 177

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L +NY C L+ GG DQW N++ G +L  R       A+T  LL  + G KMGKT SGA+W
Sbjct: 178 LFQNYGCNLEFGGDDQWSNMLAGTELIRRKLGKDASAMTITLLLNSEGKKMGKTQSGAVW 237

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           L+ E TSP++F+QYWRN+ DADV+   + LT LP+ EID+M   +G ++N AK+I+A E+
Sbjct: 238 LDPEKTSPFDFYQYWRNVGDADVLKCIRMLTFLPLEEIDKMDAWEGAQLNTAKEILAYEL 297

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATST 365
           T +VHG EEA+KA  +A   F    ++ +MPT  + + +   G + +L ++VK G A+S 
Sbjct: 298 TKLVHGEEEAKKAQESARALFSQG-NADNMPTTELEEGDFQDGKIDILAVLVKGGQASSR 356

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +EARR +    + ++   I++        DF+  G I    GKKN    
Sbjct: 357 SEARRAVTQGGVSVDGEKITDIATAYVPADFEGEGKIV-KKGKKNFRRV 404


>gi|253578840|ref|ZP_04856111.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
 gi|251849783|gb|EES77742.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
          Length = 409

 Score =  503 bits (1297), Expect = e-140,   Method: Composition-based stats.
 Identities = 173/398 (43%), Positives = 250/398 (62%), Gaps = 6/398 (1%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG I Q+++  E+  + + G  T YIG+D TA SLH GH   L L+  LQ  G
Sbjct: 3   VWDELKARGLIAQVTDEEEIKEMVNNGKATFYIGFDPTADSLHVGHFMALCLMKRLQMAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           +KPI+L+GGGT +IGDPS R + R+MM  + IQ NI+  K     FI +  GK  ALM+N
Sbjct: 63  NKPIALLGGGTGMIGDPSGRSDMRQMMTVETIQHNIDCFKKQMERFIDFSDGK--ALMVN 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL ++ Y+++LR++G  FSVNRMLS E  + R++R   L+FLEFNYMI+Q+YDF  L
Sbjct: 121 NADWLMNLNYVEVLRDVGPHFSVNRMLSHECYKQRMER--GLTFLEFNYMIMQSYDFYML 178

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            + Y C +Q GG DQW N++ G +L  R      +A+T  LL  + G KMGKT SGA+WL
Sbjct: 179 YQKYGCTMQFGGDDQWANMLGGTELIRRKLGKDAYAMTITLLLNSEGKKMGKTQSGAVWL 238

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           + E TSP++F+QYWRN+DDADV+   + LT LP+ EID MAK +G ++N+AK+I+A E+T
Sbjct: 239 DPEKTSPFDFYQYWRNVDDADVIKCMRLLTFLPLEEIDEMAKWEGSQLNKAKEILAYELT 298

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG--MGLLTLIVKAGFATST 365
            +VHG EEA+KA   A   F     + HMPT  ++ ++ S    + L++++VKAG   + 
Sbjct: 299 NLVHGEEEAKKAQEGARALFAGGADTAHMPTTELADEDFSEEGTIDLISMLVKAGMVPTR 358

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
           +E RR ++   + I+   I++ K  +        G + 
Sbjct: 359 SEGRRAIEQGGVSIDGEKITDVKYTVAKDALTGEGVVL 396


>gi|254511424|ref|ZP_05123491.1| tyrosyl-tRNA synthetase [Rhodobacteraceae bacterium KLH11]
 gi|221535135|gb|EEE38123.1| tyrosyl-tRNA synthetase [Rhodobacteraceae bacterium KLH11]
          Length = 417

 Score =  503 bits (1297), Expect = e-140,   Method: Composition-based stats.
 Identities = 218/413 (52%), Positives = 283/413 (68%), Gaps = 3/413 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KSDF++ + ERGF+   ++ + LD     G   AYIG+D TA SLH G L Q+M+L W Q
Sbjct: 6   KSDFIATMIERGFLADCTDYQGLDEALISGCKPAYIGFDATARSLHVGSLIQIMMLRWFQ 65

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG-TGKTDA 123
           KTGH+PI+LMGGGT+ +GDPSFR + R ++  ++I ENI  IK +FS++I Y    +  A
Sbjct: 66  KTGHQPITLMGGGTTKVGDPSFRADERPLLGPEQIDENIAGIKKVFSAYIDYDSDAENKA 125

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           LMLNN  WL  + Y+D LR+IG  FSVNRMLSFESV+SRL REQSLSFLEFNYMILQAYD
Sbjct: 126 LMLNNAEWLDDLNYLDFLRDIGRHFSVNRMLSFESVKSRLDREQSLSFLEFNYMILQAYD 185

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+EL + Y C LQMGGSDQWGNI+ GIDL  R+   +++ LTSPLLTT+ G KMGK+  G
Sbjct: 186 FLELNRRYGCVLQMGGSDQWGNIVNGIDLTRRVLDHEIYGLTSPLLTTSDGKKMGKSQDG 245

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIA 303
           A+WLN EM SPY FWQ+WRN  DADV  F K  T LP+ E +R+  LQG EINEAK  +A
Sbjct: 246 AVWLNAEMRSPYEFWQFWRNTTDADVGRFLKLYTELPVEECNRLGALQGAEINEAKIRLA 305

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
            E+TT++HG E A KA   A E F+       +PT+++S  E+  GM ++ +IVK+G A 
Sbjct: 306 NEVTTLLHGAEAAAKAEATAREVFEKGGVGGDLPTLTLSAAELGDGMSIVQVIVKSGLAK 365

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           S  EA+R +  N  K++++ +++  L I      S   IKLS GKK H +  L
Sbjct: 366 SGKEAKRLIAENGAKLDDAPLTDAGLMIDAGALSSP--IKLSAGKKRHALVQL 416


>gi|315222773|ref|ZP_07864660.1| tyrosyl-tRNA synthetase [Streptococcus anginosus F0211]
 gi|315188136|gb|EFU21864.1| tyrosyl-tRNA synthetase [Streptococcus anginosus F0211]
          Length = 418

 Score =  503 bits (1297), Expect = e-140,   Method: Composition-based stats.
 Identities = 151/419 (36%), Positives = 229/419 (54%), Gaps = 17/419 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L ERG + Q ++   L    ++G V+ Y GYD TA SLH GHL  ++++  LQ  G
Sbjct: 3   IFDELKERGLVFQTTDEDALRKALAEGNVSFYSGYDPTADSLHLGHLVPILVMKHLQLAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKP +L+GG T +IGDPSF+D  R +     ++  +  I+   S F+ +  G   A M+N
Sbjct: 63  HKPYALVGGATGLIGDPSFKDTERSLQTKDTVEGWVRSIQAQVSRFLDFENGDNKAEMVN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W   I +ID LR++G +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF EL
Sbjct: 123 NYDWFSDISFIDFLRDVGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFFEL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            + Y   LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WL
Sbjct: 181 NRQYGVTLQIGGSDQWGNMTAGTELLRRKADKTAHVITVPLITDATGKKFGKSEGNAVWL 240

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATE 305
           N + TSPY  +Q+W N+ DAD V F K  T LP+ EI+ + K      +E  A+KI+A E
Sbjct: 241 NADKTSPYEMYQFWMNVMDADAVRFLKIFTLLPLDEIEEIRKQFEAAPHERLAQKILARE 300

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTL 355
           + T+VHG +  ++A     + F  +I +          + +P   +  D+    + ++ L
Sbjct: 301 VVTLVHGEKAYKEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVKADD---NLNIVEL 357

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +V AG   S  +AR  +++ AI IN   I +   ++   D        +  GKK + + 
Sbjct: 358 LVTAGVVNSKRQAREDVQNGAIYINGERIQDLDYRLTDADKLENELTVIRRGKKKYFVL 416


>gi|326791163|ref|YP_004308984.1| tyrosyl-tRNA synthetase [Clostridium lentocellum DSM 5427]
 gi|326541927|gb|ADZ83786.1| tyrosyl-tRNA synthetase [Clostridium lentocellum DSM 5427]
          Length = 407

 Score =  503 bits (1297), Expect = e-140,   Method: Composition-based stats.
 Identities = 178/410 (43%), Positives = 258/410 (62%), Gaps = 5/410 (1%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + L IL ERGFI Q+++ +E+  L  +  VT YIG+D TA SLH GH   +M +  +QK 
Sbjct: 2   NVLDILMERGFIEQMTHEKEIRELLEKEKVTFYIGFDPTADSLHVGHFVTVMAMSHMQKA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI+L GGGT+++GDP+ + + R+MM ++ I  N+   K   S FI +   +  A+M+
Sbjct: 62  GHRPIALFGGGTAMVGDPTGKTDMRKMMTTEIIDHNVACFKKQMSRFISFENDE--AIMV 119

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           +N  WL ++ YID LRE+G  FSVNRML+ E  + RL  E+ LSFLEFNYM++Q+YDF+E
Sbjct: 120 DNGDWLRNLNYIDFLREVGVHFSVNRMLTAECFKQRL--EKGLSFLEFNYMLMQSYDFLE 177

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + ++C+LQ+GG+DQW NI+ G++L  RL   + F +T  LLT + G KMGKT  GA+W
Sbjct: 178 LYRRFNCKLQLGGNDQWSNILGGVELVRRLHGDQSFGMTFSLLTNSEGKKMGKTEKGAVW 237

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           L+ E TSPY F+QYWRN+ D DV      LT +PM EI+ +  ++G  IN+AK+ +A E+
Sbjct: 238 LDPEKTSPYEFYQYWRNVADTDVKRCLSLLTFIPMDEINSLTAVEGSAINKAKERLAFEV 297

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
           T +VHG EEA KA TAA   F    H   +PT  I+  +   GM +L+L+ +     S +
Sbjct: 298 TKIVHGEEEALKADTAAKALFLGGAHGGSIPTTEINTADFETGMDILSLLQETKLVPSRS 357

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           E RR +  N IK++   I++    I L D+     + +  GKK      L
Sbjct: 358 EGRRLVTQNGIKLDGVAITDPNSLITL-DYFKDNELMIQKGKKVFHKVIL 406


>gi|153816262|ref|ZP_01968930.1| hypothetical protein RUMTOR_02511 [Ruminococcus torques ATCC 27756]
 gi|317501761|ref|ZP_07959947.1| tyrosine-tRNA ligase [Lachnospiraceae bacterium 8_1_57FAA]
 gi|331088718|ref|ZP_08337628.1| tyrosyl-tRNA synthetase [Lachnospiraceae bacterium 3_1_46FAA]
 gi|145846445|gb|EDK23363.1| hypothetical protein RUMTOR_02511 [Ruminococcus torques ATCC 27756]
 gi|316896794|gb|EFV18879.1| tyrosine-tRNA ligase [Lachnospiraceae bacterium 8_1_57FAA]
 gi|330407241|gb|EGG86744.1| tyrosyl-tRNA synthetase [Lachnospiraceae bacterium 3_1_46FAA]
          Length = 407

 Score =  503 bits (1297), Expect = e-140,   Method: Composition-based stats.
 Identities = 176/409 (43%), Positives = 252/409 (61%), Gaps = 7/409 (1%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
                L  RG I Q+++   +  L + G    YIG+D TA SLH GH   L L+  LQ+ 
Sbjct: 2   GIYEELQARGLIAQVTDEERIRDLVNSGKAVFYIGFDPTADSLHVGHFMALCLMKRLQEA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           G+KPI+L+GGGT  IGDPS R + R MM  ++I  N +  K   S FI +  GK  ALM+
Sbjct: 62  GNKPIALIGGGTGYIGDPSGRTDMRSMMTPEQICHNCDCFKEQMSKFIDFSEGK--ALMV 119

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  + Y+++LREIG  FSVNRML+ E  + R+  E+ LSFLEFNYMI+QAYDF  
Sbjct: 120 NNADWLLDLNYVEVLREIGPHFSVNRMLTAECYKQRM--EKGLSFLEFNYMIMQAYDFYA 177

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + Y C +Q GG DQW N++ G +L  R       A+T  LL  + G KMGKT SGA+W
Sbjct: 178 LFQKYGCNMQFGGDDQWSNMLAGTELIRRKLGEDAGAMTITLLLNSEGKKMGKTQSGAVW 237

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           L+   TSP++F+QYWRN+ DADV+   + LT LP+ EID+M   +G ++N AK+I+A E+
Sbjct: 238 LDPNKTSPFDFYQYWRNVADADVLKCIRMLTFLPLEEIDKMDSWEGAQLNTAKEILAYEL 297

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATST 365
           T +VHG EEA+KA  +A   F     ++ MPT  +++++++ G + +LT++VK+G  TS 
Sbjct: 298 TKLVHGEEEAKKAQESARALFSKGNAAE-MPTAQLTEEDLTDGKIDILTMLVKSGLVTSK 356

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +EARR ++   + ++   +S+       ++    G I L  GKKN    
Sbjct: 357 SEARRAVQQGGVAVDGEKVSDIAASFGKEELSGEG-IILKKGKKNFRRV 404


>gi|160880710|ref|YP_001559678.1| tyrosyl-tRNA synthetase [Clostridium phytofermentans ISDg]
 gi|189083647|sp|A9KMS8|SYY_CLOPH RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|160429376|gb|ABX42939.1| tyrosyl-tRNA synthetase [Clostridium phytofermentans ISDg]
          Length = 410

 Score =  503 bits (1297), Expect = e-140,   Method: Composition-based stats.
 Identities = 179/409 (43%), Positives = 260/409 (63%), Gaps = 4/409 (0%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +   +L ERGFI Q ++  E   L  +  VT YIG+D TA SL AGH   +M +  +Q+ 
Sbjct: 4   NIYDVLLERGFIEQATHEAETKELLGKEKVTFYIGFDATADSLTAGHFLTVMAMMHMQRA 63

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI+L+GGGT++IGDP+ + + R MM  + I  N +  +   S FI +   K  A++ 
Sbjct: 64  GHRPIALLGGGTTMIGDPTGKSDMRSMMTRETIDHNAQCFQEQLSKFIDFSDDK--AIIA 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL ++ Y++ LREIG  FSVN+ML+ E  + R+  E+ L+F EFNYM++Q+YDF  
Sbjct: 122 NNADWLLNLNYVEFLREIGVHFSVNKMLTAECYKQRM--EKGLTFFEFNYMLMQSYDFWV 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L K Y C+LQ+GG+DQW NI+ G+DL  R +    F LT  LLTT+ G KMGKT+ GA+W
Sbjct: 180 LYKKYGCKLQLGGNDQWSNILGGVDLIRRKEQAPAFGLTFKLLTTSEGLKMGKTMKGAVW 239

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           LN E TSPY F+QYWRNI+D  V      LT LPM E+ R+  L+G EIN AK+++A EI
Sbjct: 240 LNPEKTSPYEFYQYWRNIEDVKVEECLGLLTFLPMDEVRRLGALEGAEINHAKEVLAYEI 299

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
           T +VHG EEA+KA  AA   F   + S+HMPT + S      G+ L+T+++ A  ATS +
Sbjct: 300 TKIVHGEEEAKKAQEAAKSLFAGGVTSEHMPTTTYSSAAFEEGIDLITMMIDAKLATSRS 359

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +ARR+++   + +N+  +++   + K  DF+  G + +  GKK + +  
Sbjct: 360 DARRNIEQGGVSVNDVKVTDFARKFKSNDFNDDGALLVKKGKKAYHLFR 408


>gi|294501547|ref|YP_003565247.1| tyrosyl-tRNA synthetase [Bacillus megaterium QM B1551]
 gi|294351484|gb|ADE71813.1| tyrosyl-tRNA synthetase [Bacillus megaterium QM B1551]
          Length = 419

 Score =  503 bits (1296), Expect = e-140,   Method: Composition-based stats.
 Identities = 160/420 (38%), Positives = 240/420 (57%), Gaps = 11/420 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D L  L  RG I+Q ++ + L  L S+  V  Y G+D TA SLH GH+  +++L   Q+ 
Sbjct: 2   DILQDLEFRGLINQQTDEKGLSELLSKESVRLYCGFDPTADSLHIGHMLPVLILRRFQQA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI+L+GGGT +IGDPS +   R +   + +    E+IKG  S F+ +  G+  A++ 
Sbjct: 62  GHQPIALVGGGTGLIGDPSGKKAERTLNEKETVAMFSERIKGQLSRFLDFEEGENAAVIA 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W+ S+  I  LR+IG  F +N M++ +SV+SR++    +SF EF+YMILQ+YDF+ 
Sbjct: 122 NNYDWIGSLDVITFLRDIGKNFGINYMMAKDSVQSRIES--GISFTEFSYMILQSYDFLN 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGER-LKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           L + Y+C+LQ+GGSDQWGNI  G++L  +  +  K F LT PL+T A GTK GKT  GAI
Sbjct: 180 LYQTYNCKLQIGGSDQWGNITAGLELIRKSEEDAKAFGLTVPLVTKADGTKFGKTEGGAI 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA--KLQGKEINEAKKIIA 303
           WL+ E TSPY F+Q+W N DD DV+ + K  T L   EI+ +A    +  E  EA+K +A
Sbjct: 240 WLDPEKTSPYEFYQFWINTDDRDVIKYLKYFTFLSHEEINELAASAKEAPEKREAQKALA 299

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVS------RGMGLLTLIV 357
             +TT+VHG E  E+A   +   F  SI       I     +V         +GL+ L+V
Sbjct: 300 AAMTTLVHGEEALEQAIRISQALFSGSISELTAEEIKQGFKDVPSYTHTGENIGLIDLLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           ++  + S  +AR  + + AI +N     + +  +  +D        +  GKK + +    
Sbjct: 360 ESKISPSKRQAREDISNGAIYLNGEREQDLQKTVGAEDRIEGQFTVIRRGKKKYTLIQYA 419


>gi|320539632|ref|ZP_08039296.1| tyrosyl-tRNA synthetase [Serratia symbiotica str. Tucson]
 gi|320030244|gb|EFW12259.1| tyrosyl-tRNA synthetase [Serratia symbiotica str. Tucson]
          Length = 424

 Score =  503 bits (1296), Expect = e-140,   Method: Composition-based stats.
 Identities = 162/423 (38%), Positives = 229/423 (54%), Gaps = 19/423 (4%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q 
Sbjct: 4   SNLIKQLQERGLVAQVTDEEALIERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQL 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSFR   R++  S+ + +  EKI+   S F+ +  G   A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFRATERKLNTSETVSQWGEKIRQQVSPFLDFDCGSNSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYDF 184
            NN  W   +  +  LR+IG  FSVN+M++ E+V+ RL R+   +SF EF+Y +LQ +DF
Sbjct: 124 ANNYDWYGGMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDSGISFTEFSYNLLQGFDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
            EL   +   LQ+GGSDQWGNI  GIDL  R+    +F LT PL+T A GTK GKT  GA
Sbjct: 184 SELYHRHQVELQIGGSDQWGNITSGIDLTRRMHQKPVFGLTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINEAKKII 302
           +WL+ E TSPY F+Q+W N +DADV  F K  T L +++I+ + +      +   A+ ++
Sbjct: 244 VWLSAEKTSPYKFYQFWINTEDADVYRFLKFFTFLNLADINALEEEDKNSDQAPRAQYVL 303

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHS-----------QHMPTISISKDEVSRGMG 351
           A E+T MVHG E    A       F   +H              MPTI +S D       
Sbjct: 304 AEEVTGMVHGAEGLAAAKRITQSLFSGVLHDLTEADFAQLAQDGMPTIKLSGD-----AD 358

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           L   +V A    S  +AR  + SNA+ IN    SN +      D        L  GKK++
Sbjct: 359 LQQALVNAELVPSRGQARTMIVSNAVSINGEKQSNAEYTFSDADRLFGRYTLLRRGKKHY 418

Query: 412 IIC 414
            + 
Sbjct: 419 CLV 421


>gi|283779905|ref|YP_003370660.1| tyrosyl-tRNA synthetase [Pirellula staleyi DSM 6068]
 gi|283438358|gb|ADB16800.1| tyrosyl-tRNA synthetase [Pirellula staleyi DSM 6068]
          Length = 426

 Score =  503 bits (1296), Expect = e-140,   Method: Composition-based stats.
 Identities = 161/426 (37%), Positives = 245/426 (57%), Gaps = 14/426 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +D  + LS RG IHQ ++P EL    ++   T Y G+D TA SLH G L  LMLL   QK
Sbjct: 2   TDIFAELSWRGLIHQTTSPDELPKWLAEQSRTLYCGFDPTADSLHVGSLLPLMLLRRFQK 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+P++L+GG T +IGDPS + E R+++ +  + +N+  I+      + +  G + A +
Sbjct: 62  AGHRPLALVGGATGMIGDPSGKSEERKLLDTDSLAKNVAGIEQQLRLLLDF-EGPSGARL 120

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           LNN  W+    ++D LR++G    V+ M++ +S+  R +RE  +S+ EF+YM+LQAYDFV
Sbjct: 121 LNNHDWMGKFSFLDFLRDVGKHVPVSVMMAKDSISGRFEREAGISYTEFSYMLLQAYDFV 180

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L K++ C LQ+GGSDQWGNI  GIDL  R++ P+L+ +T PLL  + GTKMGK+  GAI
Sbjct: 181 HLNKHFGCELQIGGSDQWGNITAGIDLARRMQGPQLYGMTCPLLLKSDGTKMGKSEKGAI 240

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA--KLQGKEINEAKKIIA 303
           +L+ + TSPY F+QYW N+ DADV    + LT L   EID +   +       +++K +A
Sbjct: 241 YLSAKRTSPYAFYQYWVNVADADVGKCLRFLTELTQEEIDALDASRSTDAAARQSQKRLA 300

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVS-RGMGL 352
            E+T M+HG E    A  A    F   I              +P+  + KD +S  G+ L
Sbjct: 301 EELTRMIHGTEGLSAAERATAIFFGAEISQLSDDQLTEIFADVPSQQLPKDRLSGDGLSL 360

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           +  +V++G A S  EARR ++     +NN+ I+   +++      S   + L  GKK + 
Sbjct: 361 IDALVESGLAPSKKEARRTIEQGGAYVNNTKITAVDMKLSPASLASETTVVLRSGKKKYA 420

Query: 413 ICHLCG 418
           +    G
Sbjct: 421 LLRFVG 426


>gi|295109895|emb|CBL23848.1| tyrosyl-tRNA synthetase [Ruminococcus obeum A2-162]
          Length = 409

 Score =  503 bits (1296), Expect = e-140,   Method: Composition-based stats.
 Identities = 172/402 (42%), Positives = 252/402 (62%), Gaps = 7/402 (1%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG I Q+++  E+  + + G  T YIG+D TA SLH GH   L L+  LQ  G
Sbjct: 3   VWEELKARGLIAQVTDEDEIKEMVNNGKATFYIGFDPTADSLHVGHFMALCLMKRLQMAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           ++PI+L+GGGT +IGDPS R + R+MM  + IQ NI+  K   S FI +  GK  ALM+N
Sbjct: 63  NRPIALLGGGTGMIGDPSGRTDMRQMMTKETIQHNIDCFKKQMSRFIDFSDGK--ALMVN 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL ++ Y+DLLR++G+ FSVNRML+ E  + R++R   LSFLEFNYMI+Q+YDF  L
Sbjct: 121 NADWLLNLNYVDLLRDVGAHFSVNRMLTAECYKQRMER--GLSFLEFNYMIMQSYDFYML 178

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            + Y C +Q GG DQW N++ G +L  R      +A+T  LL  + G KMGKT SGA+WL
Sbjct: 179 YQKYGCNMQFGGDDQWSNMLGGTELIRRKLGKDAYAMTITLLLNSEGKKMGKTQSGAVWL 238

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           +   TSP++F+QYWRN+DDADV+   + LT LP+ +ID MA  +G ++N+AK+I+A E+T
Sbjct: 239 DPNKTSPFDFYQYWRNVDDADVIKCMRLLTFLPLEQIDEMATWEGSQLNKAKEILAYELT 298

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG--MGLLTLIVKAGFATST 365
            +VHG EEA+KA   A   F     + HMP+  ++ ++ +    + L+T+++KAG   + 
Sbjct: 299 NLVHGEEEAKKAQEGARALFSGGADTAHMPSTELADEDFTEDDTIDLITMLIKAGLVPTR 358

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFG 407
           +E RR ++   + I+   I++ K  +        G + L  G
Sbjct: 359 SEGRRAIEQGGVSIDGEKITDIKHTVAKDSLAGDG-VVLKRG 399


>gi|55821842|ref|YP_140284.1| tyrosyl-tRNA synthetase [Streptococcus thermophilus LMG 18311]
 gi|55823758|ref|YP_142199.1| tyrosyl-tRNA synthetase [Streptococcus thermophilus CNRZ1066]
 gi|55737827|gb|AAV61469.1| tyrosyl-tRNA synthetase [Streptococcus thermophilus LMG 18311]
 gi|55739743|gb|AAV63384.1| tyrosyl-tRNA synthetase [Streptococcus thermophilus CNRZ1066]
          Length = 438

 Score =  503 bits (1296), Expect = e-140,   Method: Composition-based stats.
 Identities = 151/419 (36%), Positives = 228/419 (54%), Gaps = 17/419 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG I Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  G
Sbjct: 23  IFEELKARGLIFQTTDEEALVKAFEEGPVSFYTGYDPTADSLHLGHLVAILTSRRLQLAG 82

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKP +L+GG T +IGDPSF+D  R +   + ++  +EKI+G  S F+ +  G   A+M+N
Sbjct: 83  HKPYALVGGATGLIGDPSFKDAERSLQTKETVEGWVEKIQGQLSRFLDFENGDNKAVMVN 142

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W  S+ +ID LR++G +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF EL
Sbjct: 143 NYDWFGSVSFIDFLRDVGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFYEL 200

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
              Y   LQ+GGSDQWGN+  G +L  R        +T PL+T ++G K GK+   A+WL
Sbjct: 201 NAKYGVTLQIGGSDQWGNMTAGTELLRRKADKSGHVITVPLITDSTGKKFGKSEGNAVWL 260

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIATE 305
           +   T+PY  +Q+W N+ D D V F K  T L + EI+ + K   Q +    A+K++A E
Sbjct: 261 DATKTTPYEMYQFWLNVMDDDAVRFLKIFTFLSLEEIEEIGKEFDQARHQRLAQKVLARE 320

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTL 355
           + T+VHG+E  E+A     + F  ++ +            +PT  IS DE    + ++ L
Sbjct: 321 VVTLVHGKEAYEQAVHITEQLFAGNLKALSARDLKVALNGVPTYEISADE---NLNIVEL 377

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +V A  + S  +AR  +++ AI IN   + +    +   D        +  GKK + + 
Sbjct: 378 LVNAKISPSKRQAREDVQNGAIYINGERVQDLDYTLSDTDKIDNEITVIRRGKKKNFVL 436


>gi|330838923|ref|YP_004413503.1| Tyrosyl-tRNA synthetase [Selenomonas sputigena ATCC 35185]
 gi|329746687|gb|AEC00044.1| Tyrosyl-tRNA synthetase [Selenomonas sputigena ATCC 35185]
          Length = 406

 Score =  503 bits (1296), Expect = e-140,   Method: Composition-based stats.
 Identities = 179/409 (43%), Positives = 258/409 (63%), Gaps = 7/409 (1%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           ++   +L ERGFI Q ++   +  L  +  VT Y G+D TA SLH GH   LM +  +Q+
Sbjct: 2   ANVFDVLKERGFIAQCTDEEGVRELLGKESVTFYTGFDPTADSLHVGHFLGLMAMSHMQR 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+P+ L+GGGT  +GDPS R + RRM+  ++I+ N +  K   + FI +  GK  ALM
Sbjct: 62  AGHRPVCLVGGGTGTVGDPSGRTDMRRMLTDEDIEHNCDCFKKQIARFIDFSEGK--ALM 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  WL  + YI+LLRE+G+ F+VNRMLS E+ ++R   E+ L+FLEFNYM++QAYDF+
Sbjct: 120 VNNGDWLRKLNYIELLREVGAHFTVNRMLSAEAYKTR--WEKGLTFLEFNYMVMQAYDFL 177

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           EL+    C+LQMGG DQW NII G++L  R +    + LT  LLT + G KMGKT  GA+
Sbjct: 178 ELSHRCGCKLQMGGDDQWSNIIAGVELIRRKEAKPAYGLTFTLLTKSDGQKMGKTAGGAL 237

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
           WL+ E TSPY+F+QYWRNIDDADV      LT LPM E+ R+  L+   INEAK ++A E
Sbjct: 238 WLDAEKTSPYDFYQYWRNIDDADVEKCLALLTFLPMEEVRRLGALRDAAINEAKTVLAYE 297

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           +T +VHG  EA+KA   A   F     S  +PT +++ +E+  G  LL ++ K G  +S 
Sbjct: 298 VTKLVHGEAEAKKAKEGAEAMFGRGAASAELPTFTLTAEEM--GAKLLDILAKNGVFSSK 355

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +E RR +    + +N++ +++   +++ +DF S G   +  GKK H   
Sbjct: 356 SEGRRLISQGGVTLNDARVTDADYRLQEEDF-SDGTALVKKGKKKHYRL 403


>gi|329113797|ref|ZP_08242568.1| Tyrosyl-tRNA synthetase [Acetobacter pomorum DM001]
 gi|326696807|gb|EGE48477.1| Tyrosyl-tRNA synthetase [Acetobacter pomorum DM001]
          Length = 422

 Score =  503 bits (1296), Expect = e-140,   Method: Composition-based stats.
 Identities = 199/417 (47%), Positives = 283/417 (67%), Gaps = 2/417 (0%)

Query: 3   AFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
            FKS F+   + RGFI Q ++   LD L ++  V AYIG+D TA SLH G L Q+M+L  
Sbjct: 5   GFKSSFMREAAARGFIFQCTDADALDALMAEKSVAAYIGFDPTADSLHVGSLIQIMMLRL 64

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD 122
           LQK GH+PI+L+GGGT+ IGDPSFR+E+RR+M    IQ N+  I+G    F+ +G+G ++
Sbjct: 65  LQKHGHRPIALVGGGTARIGDPSFREEARRLMTEDIIQTNLAGIEGCLRQFLTFGSGASE 124

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
           A+++NN  WL  + YIDLLR++G  FS+NRML+F+SV++RL+REQ L+FLEFNY ILQ+Y
Sbjct: 125 AVLVNNADWLDKLAYIDLLRDVGVHFSINRMLAFDSVKNRLEREQGLTFLEFNYSILQSY 184

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DF EL +  D  LQ+GGSDQWGNII G++L  R     +  LT+PLLTTASG KMGKT +
Sbjct: 185 DFRELNRRMDVVLQLGGSDQWGNIISGVELVRRTDQKSVMGLTTPLLTTASGAKMGKTAN 244

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKII 302
           GA+WL+++    +++WQ+WRN +DADV  F +  T LP+ E  R+  LQG EINEAKK++
Sbjct: 245 GAVWLSEKRLPVFDYWQFWRNTEDADVGRFLRLFTELPLEECARLEALQGAEINEAKKVL 304

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMS-IHSQHMPTISISKDEVSRGMGLLTLIVKAGF 361
           ATE T + HGR  A  AA AA + F+   + +  +P   +++ +++ G+ +  L  +AG 
Sbjct: 305 ATEATALCHGRNAALAAAEAARQTFEEGRVAAADLPVHEVAEADMAAGIPVFRLFAEAGL 364

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLCG 418
             +  EARR ++    ++NN +I +E   I  QD    G IKLS GKK+H++  + G
Sbjct: 365 VKTNGEARRLVRGGGARLNNDVIQDENRLITQQDMV-DGAIKLSAGKKHHVLVKVGG 420


>gi|315640615|ref|ZP_07895721.1| tyrosine--tRNA ligase [Enterococcus italicus DSM 15952]
 gi|315483643|gb|EFU74133.1| tyrosine--tRNA ligase [Enterococcus italicus DSM 15952]
          Length = 428

 Score =  503 bits (1295), Expect = e-140,   Method: Composition-based stats.
 Identities = 163/420 (38%), Positives = 247/420 (58%), Gaps = 17/420 (4%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           SDF   L +RG + Q ++   L+   ++  V  Y+G+D TA SLH GHL  +++L   Q 
Sbjct: 10  SDFFQELKDRGLVFQTTDEAALEKQLNEESVKLYVGFDPTADSLHIGHLLPILMLRRFQL 69

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH PI+L+GGGT +IGDPSF+D+ R++     +QE  + IK   S FI +   K  A++
Sbjct: 70  QGHVPIALVGGGTGMIGDPSFKDQERQLNTLSIVQEWSQSIKDQLSRFIDFDDEKAPAVL 129

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
            NN  WL SI  ID LR++G  F++N M+S ESV+ R++    +S+ EF Y +LQAYDF+
Sbjct: 130 ANNYDWLGSISLIDFLRDVGKNFTINYMMSKESVKRRIES--GISYTEFAYQLLQAYDFL 187

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           +L +N+ C LQ+GGSDQWGNI  GI+L  R K  + F LT PL+T A GTK GKT   A+
Sbjct: 188 KLYENHGCLLQLGGSDQWGNITSGIELLRREKEVQGFGLTMPLITKADGTKFGKTEGNAV 247

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIA 303
           WL+ E T+PY F+Q+W N DD DV+ F K  T L ++EI  + +      E   A+K +A
Sbjct: 248 WLDPEKTTPYEFYQFWINTDDRDVIKFLKYFTFLSLTEITAIEQEFTAAPESRVAQKALA 307

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLL 353
            E+TT+VHG E+  +A   +   F   + +          + +P+  I+ ++   G  LL
Sbjct: 308 KEVTTLVHGEEKYRQAVHISQALFSGELKTLSSEEISQGFKGVPSYEITTED---GSQLL 364

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            L+V +   +S  +AR  L++ AI +N   I +   +++ +D  S  +  +  GKK + +
Sbjct: 365 DLLVASKIVSSRRQAREDLQNGAIYVNGDRIQSVDYELREEDKLSGKHTIIRRGKKKYFL 424


>gi|209964922|ref|YP_002297837.1| tyrosyl-tRNA synthetase TyrS [Rhodospirillum centenum SW]
 gi|209958388|gb|ACI99024.1| tyrosyl-tRNA synthetase TyrS [Rhodospirillum centenum SW]
          Length = 420

 Score =  503 bits (1295), Expect = e-140,   Method: Composition-based stats.
 Identities = 210/413 (50%), Positives = 279/413 (67%), Gaps = 2/413 (0%)

Query: 3   AFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
           + KSDFL I+ ERG+ HQ ++   LD     G +  Y GYD TA SLH GHL   M+  W
Sbjct: 8   SVKSDFLRIMLERGYYHQATDLEALDKALLAGGLVGYNGYDATADSLHVGHLLPTMIQRW 67

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD 122
           LQKTG +PI LMGGGT+ IGDPS RDE+R+++  + I  NI  I+ +F     +G   + 
Sbjct: 68  LQKTGGRPILLMGGGTTRIGDPSGRDETRQLLTDEVIAANIAGIRTVFDRLFDFGP--SG 125

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
           A ++NN  WL  ++YI  LR+IG  F++NRML+F+SVR RL REQ L+FLEFNYMILQAY
Sbjct: 126 ARLVNNAEWLDRLEYISFLRDIGRHFTINRMLTFDSVRLRLDREQPLTFLEFNYMILQAY 185

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DFVEL++ Y C LQ GGSDQWGNI+ G+DLG R+    LF LT PLLTTASG KMGKT +
Sbjct: 186 DFVELSRRYGCVLQTGGSDQWGNIVNGVDLGRRIANRDLFGLTCPLLTTASGAKMGKTAA 245

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKII 302
           GA+WLN+E  S ++FWQYWRN +DADV  F K  T LP+ EI R+  LQG EINEAKKI+
Sbjct: 246 GAVWLNRERLSDWDFWQYWRNTEDADVGRFLKLFTELPLDEIARLEALQGAEINEAKKIL 305

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFA 362
           ATE+T +V G E A+ AA  A   F+    ++ +PT+ +  DE++ G+ +  L+ KAG  
Sbjct: 306 ATEVTRLVRGDEAADAAAETARRTFEQGALAEGLPTVELPADELAAGVAVYGLLAKAGLV 365

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            S  EARR +K  A+++N+  +++E  ++   D  + G IKLS G+K H +  
Sbjct: 366 ASNGEARRQIKQAAVRVNDQPVTDEFAKVGSGDLTADGVIKLSVGRKRHALVK 418


>gi|97197361|sp|Q5LXV1|SYY1_STRT1 RecName: Full=Tyrosyl-tRNA synthetase 1; AltName:
           Full=Tyrosine--tRNA ligase 1; Short=TyrRS 1
 gi|97197368|sp|Q5M2F3|SYY1_STRT2 RecName: Full=Tyrosyl-tRNA synthetase 1; AltName:
           Full=Tyrosine--tRNA ligase 1; Short=TyrRS 1
 gi|312279184|gb|ADQ63841.1| Tyrosyl-tRNA synthetase 1 [Streptococcus thermophilus ND03]
          Length = 418

 Score =  503 bits (1295), Expect = e-140,   Method: Composition-based stats.
 Identities = 151/419 (36%), Positives = 228/419 (54%), Gaps = 17/419 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG I Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  G
Sbjct: 3   IFEELKARGLIFQTTDEEALVKAFEEGPVSFYTGYDPTADSLHLGHLVAILTSRRLQLAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKP +L+GG T +IGDPSF+D  R +   + ++  +EKI+G  S F+ +  G   A+M+N
Sbjct: 63  HKPYALVGGATGLIGDPSFKDAERSLQTKETVEGWVEKIQGQLSRFLDFENGDNKAVMVN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W  S+ +ID LR++G +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF EL
Sbjct: 123 NYDWFGSVSFIDFLRDVGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFYEL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
              Y   LQ+GGSDQWGN+  G +L  R        +T PL+T ++G K GK+   A+WL
Sbjct: 181 NAKYGVTLQIGGSDQWGNMTAGTELLRRKADKSGHVITVPLITDSTGKKFGKSEGNAVWL 240

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIATE 305
           +   T+PY  +Q+W N+ D D V F K  T L + EI+ + K   Q +    A+K++A E
Sbjct: 241 DATKTTPYEMYQFWLNVMDDDAVRFLKIFTFLSLEEIEEIGKEFDQARHQRLAQKVLARE 300

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTL 355
           + T+VHG+E  E+A     + F  ++ +            +PT  IS DE    + ++ L
Sbjct: 301 VVTLVHGKEAYEQAVHITEQLFAGNLKALSARDLKVALNGVPTYEISADE---NLNIVEL 357

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +V A  + S  +AR  +++ AI IN   + +    +   D        +  GKK + + 
Sbjct: 358 LVNAKISPSKRQAREDVQNGAIYINGERVQDLDYTLSDTDKIDNEITVIRRGKKKNFVL 416


>gi|148381266|ref|YP_001255807.1| tyrosyl-tRNA synthetase [Clostridium botulinum A str. ATCC 3502]
 gi|153933916|ref|YP_001385642.1| tyrosyl-tRNA synthetase [Clostridium botulinum A str. ATCC 19397]
 gi|153934882|ref|YP_001389048.1| tyrosyl-tRNA synthetase [Clostridium botulinum A str. Hall]
 gi|254783581|sp|A7FYR9|SYY_CLOB1 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|254783585|sp|A5I748|SYY_CLOBH RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|148290750|emb|CAL84881.1| tyrosyl-tRNA synthetase [Clostridium botulinum A str. ATCC 3502]
 gi|152929960|gb|ABS35460.1| tyrosyl-tRNA synthetase [Clostridium botulinum A str. ATCC 19397]
 gi|152930796|gb|ABS36295.1| tyrosine--tRNA ligase [Clostridium botulinum A str. Hall]
          Length = 407

 Score =  503 bits (1295), Expect = e-140,   Method: Composition-based stats.
 Identities = 178/407 (43%), Positives = 263/407 (64%), Gaps = 8/407 (1%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+   IL ERG+I Q+++  E+  L  +  ++ YIG+D TA SLH GH  Q+M++  +QK
Sbjct: 2   SNVYDILKERGYIKQLTHEEEIRELLGKEKISFYIGFDPTADSLHVGHFLQMMVMAHMQK 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+PI+L+GGGT +IGDP+ + + R+MM  ++I+ N    K   +  I +   K  A+M
Sbjct: 62  AGHRPIALVGGGTGMIGDPTGKTDMRKMMTKEQIEHNCNCFKKQLAKIIDFSEDK--AIM 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  WL ++ YI+ LREIG  FSVN+ML+ E  +SRL  E+ LSFLEFNYM++Q YDF+
Sbjct: 120 VNNADWLLNLNYIEFLREIGVHFSVNKMLTAECFKSRL--EKGLSFLEFNYMLMQGYDFL 177

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           EL + Y+C +++GG DQW NI+ G+DL  R ++   + +T  LLT + G KMGKT SGA+
Sbjct: 178 ELNRKYNCVMELGGDDQWSNILAGVDLIRRKESKSAYGMTFTLLTNSEGKKMGKTESGAL 237

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
           WL+ E TSPY F+QYWRN+ DADV    + +T LPM E+ R++ L+G EINEAKK++A E
Sbjct: 238 WLDPEKTSPYEFYQYWRNVADADVEKCLRLITFLPMDEVRRLSSLEGAEINEAKKVLAFE 297

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHS-QHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           +T ++HG EEA+KA  AA   F  +     +MPT  I K++++  +  L   VK     S
Sbjct: 298 VTKLIHGEEEAQKAKIAAEALFGGNAKDLGNMPTAYIDKNDLNNLLVDLL--VKCEILPS 355

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
            +EARR +K   + +N+  +++  L +  +     G I +  GKKN 
Sbjct: 356 KSEARRLIKQGGLYLNDEKVTDMNLVVTEEHVTEDG-IMIRRGKKNF 401


>gi|332364486|gb|EGJ42257.1| tyrosine--tRNA ligase [Streptococcus sanguinis SK355]
          Length = 419

 Score =  503 bits (1295), Expect = e-140,   Method: Composition-based stats.
 Identities = 145/416 (34%), Positives = 226/416 (54%), Gaps = 11/416 (2%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L ERG + Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  G
Sbjct: 4   IFDELKERGLVFQTTDEEALRKALEEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAG 63

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKP +L+GG T +IGDPSF+D  R +   + ++  ++ I+   S F+ +  G   A M+N
Sbjct: 64  HKPYALVGGATGLIGDPSFKDAERSLQTKETVEGWVKSIQNQLSRFLDFEKGDNKAEMVN 123

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W  SI +ID LR++G +F+VN M+S +SV+SR+  E  +S+ EF Y I+Q YDF  L
Sbjct: 124 NYDWFSSISFIDFLRDVGKYFTVNYMMSKDSVKSRI--ETGISYTEFAYQIMQGYDFYVL 181

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            +N+   LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WL
Sbjct: 182 NQNHGVTLQIGGSDQWGNMTAGTELLRRKADKTGHVMTVPLITDATGKKFGKSEGNAVWL 241

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATE 305
           N + TSPY  +Q+W N+ DAD + F K  T L + EI+ + +      +E  A+K++A E
Sbjct: 242 NPDKTSPYEMYQFWMNVMDADAIRFLKIFTFLSLDEIEEIRQQFESAPHERLAQKVLARE 301

Query: 306 ITTMVHGREEAEKAATAAMECFDMSI-------HSQHMPTISISKDEVSRGMGLLTLIVK 358
           + ++VHG+E  + A     + F  +I         Q +  +   + +    + ++ L+V 
Sbjct: 302 VVSLVHGQEAYQDALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVQAEDNLNIVELLVT 361

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           AG   S  +AR  +++ AI +N   I +    +   D        +  GKK + + 
Sbjct: 362 AGVVNSKRQAREDVQNGAIYLNGERIQDLDYVLSASDKLEDELTVIRRGKKKYFVL 417


>gi|255264506|ref|ZP_05343848.1| tyrosyl-tRNA synthetase [Thalassiobium sp. R2A62]
 gi|255106841|gb|EET49515.1| tyrosyl-tRNA synthetase [Thalassiobium sp. R2A62]
          Length = 417

 Score =  503 bits (1295), Expect = e-140,   Method: Composition-based stats.
 Identities = 212/413 (51%), Positives = 292/413 (70%), Gaps = 3/413 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KSDF++++ ERGF+   ++ + LD   + GVV AYIG+D TA SLH G L Q+M+L WLQ
Sbjct: 6   KSDFITVMIERGFLADCTDYQGLDDAFAAGVVPAYIGFDATAQSLHVGSLIQIMMLRWLQ 65

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK-TDA 123
           K G KPI+LMGGGT+ +GDPSFR + R ++ +++I  NI  IK +F+++I Y +G  T A
Sbjct: 66  KCGGKPITLMGGGTTKVGDPSFRADERPLLTTKQINANIAGIKQVFAAYIDYESGDDTQA 125

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           LMLNN  WL  + Y+D LR+IG  FSVNRML+FESV+SRL REQSLSFLEFNYMILQAYD
Sbjct: 126 LMLNNAEWLEDLNYLDFLRDIGRHFSVNRMLAFESVKSRLDREQSLSFLEFNYMILQAYD 185

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+EL + Y C LQ+GGSDQWGNI+ GIDL  R+   +++ LTSPLLTT+ G KMGK+  G
Sbjct: 186 FLELNRRYGCLLQLGGSDQWGNIVNGIDLTRRVLDHEIYGLTSPLLTTSDGKKMGKSQDG 245

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIA 303
           AIWLN EM +PY FWQ+WRN +D DV  F K  T LP++E DR+  L+G +INEAK ++A
Sbjct: 246 AIWLNAEMCAPYEFWQFWRNTNDDDVGRFLKLYTDLPIAECDRLGALEGSDINEAKIVLA 305

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
            E+T ++HG++ A  A   A E F+       +PT++++ D+VS G+ ++ LIV++G A 
Sbjct: 306 NEVTKLLHGKDAAAAAEATAREVFEKGGVGDDLPTLTLTADDVSDGISVVQLIVRSGLAG 365

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           S  EA+R +  N  K+N+  +++  + ++  D  +   IKLS GKK H +  L
Sbjct: 366 SGKEAKRLIADNGAKMNDEALTDAGMVLQAADLVTP--IKLSAGKKRHALVQL 416


>gi|167770729|ref|ZP_02442782.1| hypothetical protein ANACOL_02075 [Anaerotruncus colihominis DSM
           17241]
 gi|167667324|gb|EDS11454.1| hypothetical protein ANACOL_02075 [Anaerotruncus colihominis DSM
           17241]
          Length = 408

 Score =  503 bits (1295), Expect = e-140,   Method: Composition-based stats.
 Identities = 176/410 (42%), Positives = 265/410 (64%), Gaps = 6/410 (1%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L+ RG I Q+++P +++ L +   VT YIG+D TA SLH GH  Q++++  LQ+ G
Sbjct: 3   VFEELTRRGLIAQMTHPEKIEELLNGEKVTFYIGFDATADSLHVGHFLQMVVMKRLQQAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+PI+L+G GT+++GDP+ + + R+M+  +EI  N    K     FI +  GK  ALML 
Sbjct: 63  HRPIALLGTGTTMVGDPTGKTDMRKMLSVEEINHNAMCFKRQMEKFIDFSDGK--ALMLK 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  + YI+LLR++G  FSVN ML+ E  ++RL  E+ LSF+EFNYMI+Q+YDF++L
Sbjct: 121 NGDWLLHLNYIELLRDVGVHFSVNEMLTAECFKTRL--EKGLSFIEFNYMIMQSYDFLKL 178

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            ++Y C +Q+GG+DQW NI+ GI L  R+    ++ +T  LLTT  G KMGKT +GA+WL
Sbjct: 179 HRDYGCMMQLGGNDQWANILGGIKLTRRVTGDDVYGMTFTLLTTKEGKKMGKTENGAVWL 238

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           + E TSPY F+QYWRN+ D DV++  K LT +P+ EI+ M K +G ++N+AK+I+A E+T
Sbjct: 239 DPEKTSPYEFFQYWRNVADDDVINCLKLLTFVPIEEIEAMEKWEGSQLNKAKEILAHELT 298

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTN 366
            MVHG++EA+KA  AA   F    HS  MPT S+   +++ G + +  L+VK G A S  
Sbjct: 299 KMVHGQQEADKALEAARAIFAGGTHSDDMPTTSLVSSDLADGAISVADLLVKTGLAPSKG 358

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           EA+R ++   + +++  +S+    I  + FD    + L  GKK +    L
Sbjct: 359 EAKRLIQQGGVSVDDVKVSDFAAVIGKESFDKGQ-VILKKGKKIYHKVLL 407


>gi|260887324|ref|ZP_05898587.1| tyrosine--tRNA ligase [Selenomonas sputigena ATCC 35185]
 gi|260862960|gb|EEX77460.1| tyrosine--tRNA ligase [Selenomonas sputigena ATCC 35185]
          Length = 414

 Score =  503 bits (1295), Expect = e-140,   Method: Composition-based stats.
 Identities = 179/409 (43%), Positives = 258/409 (63%), Gaps = 7/409 (1%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           ++   +L ERGFI Q ++   +  L  +  VT Y G+D TA SLH GH   LM +  +Q+
Sbjct: 10  ANVFDVLKERGFIAQCTDEEGVRELLGKESVTFYTGFDPTADSLHVGHFLGLMAMSHMQR 69

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+P+ L+GGGT  +GDPS R + RRM+  ++I+ N +  K   + FI +  GK  ALM
Sbjct: 70  AGHRPVCLVGGGTGTVGDPSGRTDMRRMLTDEDIEHNCDCFKKQIARFIDFSEGK--ALM 127

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  WL  + YI+LLRE+G+ F+VNRMLS E+ ++R   E+ L+FLEFNYM++QAYDF+
Sbjct: 128 VNNGDWLRKLNYIELLREVGAHFTVNRMLSAEAYKTR--WEKGLTFLEFNYMVMQAYDFL 185

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           EL+    C+LQMGG DQW NII G++L  R +    + LT  LLT + G KMGKT  GA+
Sbjct: 186 ELSHRCGCKLQMGGDDQWSNIIAGVELIRRKEAKPAYGLTFTLLTKSDGQKMGKTAGGAL 245

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
           WL+ E TSPY+F+QYWRNIDDADV      LT LPM E+ R+  L+   INEAK ++A E
Sbjct: 246 WLDAEKTSPYDFYQYWRNIDDADVEKCLALLTFLPMEEVRRLGALRDAAINEAKTVLAYE 305

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           +T +VHG  EA+KA   A   F     S  +PT +++ +E+  G  LL ++ K G  +S 
Sbjct: 306 VTKLVHGEAEAKKAKEGAEAMFGRGAASAELPTFTLTAEEM--GAKLLDILAKNGVFSSK 363

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +E RR +    + +N++ +++   +++ +DF S G   +  GKK H   
Sbjct: 364 SEGRRLISQGGVTLNDARVTDADYRLQEEDF-SDGTALVKKGKKKHYRL 411


>gi|188582413|ref|YP_001925858.1| tyrosyl-tRNA synthetase [Methylobacterium populi BJ001]
 gi|179345911|gb|ACB81323.1| tyrosyl-tRNA synthetase [Methylobacterium populi BJ001]
          Length = 423

 Score =  503 bits (1295), Expect = e-140,   Method: Composition-based stats.
 Identities = 221/415 (53%), Positives = 297/415 (71%), Gaps = 2/415 (0%)

Query: 3   AFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
           A KSDF+ +L ERG+IHQ S+   +D L ++G +T Y GYD TA+SLH GHL  +M+L W
Sbjct: 7   APKSDFIRVLQERGYIHQASDLPGIDALAAEGGLTTYTGYDCTAASLHVGHLLSIMMLHW 66

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD 122
           LQKTG KP+ LMGGGT+ +GDPS RDE+R+++  ++I+ N E IK  F+ F+ +G    D
Sbjct: 67  LQKTGGKPVVLMGGGTTRVGDPSGRDEARKILTLEQIEANKEGIKQTFARFLSFGEAGND 126

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
           A+M++N  WL  + YI++LR+IG  FSVNRM+S +SVR RL+R+Q LSFLEFNYMILQ+Y
Sbjct: 127 AVMVDNAEWLTKLNYIEMLRDIGRHFSVNRMMSMDSVRMRLERDQELSFLEFNYMILQSY 186

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DFVEL + +  RLQMGGSDQWGNI+ GIDLG R+ TP+L+ALT PLLTTASG KMGKT +
Sbjct: 187 DFVELNRRFGTRLQMGGSDQWGNIVNGIDLGRRMGTPQLYALTCPLLTTASGAKMGKTAA 246

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKII 302
           GA+WL+  M SPY++WQ+WRN +DADV  F K  T LP+ EI+R+A LQG EINEAK I+
Sbjct: 247 GAVWLDAGMLSPYDYWQFWRNTEDADVGRFLKLFTLLPLPEIERLAALQGAEINEAKTIL 306

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLI--VKAG 360
           ATE T ++HG E A  AA  A + F     +Q +PTI +    +  G+G+LT      A 
Sbjct: 307 ATEATALMHGAEAATAAAETARKTFVEGTLAQSLPTIPVPSAVLEAGLGVLTAFGPDYAR 366

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
              ST+EARR +K   +++N+  +S+EK  ++  D  + G IKLSFG+K H++  
Sbjct: 367 LVPSTSEARRQIKGGGLRVNDVQVSDEKAVLRPSDLTAEGVIKLSFGRKKHVLLR 421


>gi|306828567|ref|ZP_07461762.1| tyrosine--tRNA ligase [Streptococcus mitis ATCC 6249]
 gi|304429366|gb|EFM32451.1| tyrosine--tRNA ligase [Streptococcus mitis ATCC 6249]
          Length = 418

 Score =  502 bits (1294), Expect = e-140,   Method: Composition-based stats.
 Identities = 152/419 (36%), Positives = 228/419 (54%), Gaps = 17/419 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L ERG I Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  G
Sbjct: 3   IFDELKERGLIFQTTDEEALRKALEEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKP +L+GG T +IGDPSF+D  R +     +   ++ I+G  S F+ +  G+  A+M+N
Sbjct: 63  HKPYALVGGATGLIGDPSFKDAERSLQTKDTVDGWVKSIQGQLSRFLDFENGENKAVMVN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W  SI +ID LR+IG +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF  L
Sbjct: 123 NYDWFGSISFIDFLRDIGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFYVL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            ++++  LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WL
Sbjct: 181 NQDHNVTLQIGGSDQWGNMTAGTELLRRKADKTGHVITVPLITDATGKKFGKSEGNAVWL 240

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATE 305
           N E TSPY  +Q+W N+ DAD V F K  T L + EI+ + K      +E  A+K++A E
Sbjct: 241 NPEKTSPYEMYQFWMNVMDADAVRFLKIFTFLSLDEIEEIRKQFEAAPHERLAQKVLARE 300

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTL 355
           + T+VHG E  ++A     + F  +I +          + +P   +  DE      ++ L
Sbjct: 301 VVTLVHGEEAYKEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVQADE---NHNIVEL 357

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +V +G   S  +AR  +++ AI +N   I +    +   D        +  GKK + + 
Sbjct: 358 LVSSGVVNSKRQAREDVQNGAIYVNGERIQDLDYVLSDADKLENELTVIRRGKKKYFVL 416


>gi|239625518|ref|ZP_04668549.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239519748|gb|EEQ59614.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 408

 Score =  502 bits (1294), Expect = e-140,   Method: Composition-based stats.
 Identities = 172/410 (41%), Positives = 246/410 (60%), Gaps = 6/410 (1%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG I Q++N  E+  + ++G    YIG+D TA SLH GH   L L+  LQ  G
Sbjct: 3   IYEELVARGLIAQVTNEEEIKKMVNEGKAVFYIGFDPTADSLHVGHFMALCLMKRLQMAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           +KPI+L+GGGT ++GDPS R + R MM  + IQ N +  K   S FI +  GK  A+M+N
Sbjct: 63  NKPIALIGGGTGMVGDPSGRSDMRTMMTPEIIQHNCDCFKKQMSRFIDFSEGK--AMMVN 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  + YID LRE+G  FSVN ML  E  + R+  E+ LSFLEFNYMI+Q+YDF EL
Sbjct: 121 NAEWLMGLNYIDFLREVGPHFSVNNMLRAECYKQRM--EKGLSFLEFNYMIMQSYDFYEL 178

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
              Y C +Q GG DQW N++ G +L  R       A+T  LL  + G KMGKT SGA+WL
Sbjct: 179 FLRYGCNMQFGGDDQWSNMLGGTELIRRKLGKDAHAMTITLLLNSEGKKMGKTQSGAVWL 238

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           +   T+P+ F+QYWRN+ DADV+   + LT LP+ +ID M + +G ++N+AK+I+A E+T
Sbjct: 239 DPNKTTPFEFYQYWRNVADADVLKCLRMLTFLPIEQIDEMDQWEGSQLNQAKEILAFELT 298

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTN 366
            +VHG EEA KA   A   F     + +MPT  +S+++   G + +L ++ K+G   S +
Sbjct: 299 KLVHGEEEAAKAQEGARALFAAGGSTANMPTFELSEEDFVDGSIDILGVLQKSGLCASRS 358

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           EARR+++   + ++ S + + K       F   G +    GKKN +   +
Sbjct: 359 EARRNVEQGGVSVDGSQVKDIKAAFAKDQFAGDG-MVFKRGKKNFMKVVV 407


>gi|325265205|ref|ZP_08131931.1| tyrosine--tRNA ligase [Clostridium sp. D5]
 gi|324029609|gb|EGB90898.1| tyrosine--tRNA ligase [Clostridium sp. D5]
          Length = 407

 Score =  502 bits (1294), Expect = e-140,   Method: Composition-based stats.
 Identities = 179/410 (43%), Positives = 259/410 (63%), Gaps = 7/410 (1%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG I Q+++ + +  L + G  T YIG+D TA SLH GH   L L+  LQ  G
Sbjct: 3   LYEELQARGLIAQVTDEKLISDLINNGKATFYIGFDPTADSLHVGHFMALCLMKRLQMAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           +KPI+L+GGGT +IGDPS R + R++M ++ IQ N +  K   S+FI +  GK  A+M+N
Sbjct: 63  NKPIALIGGGTGMIGDPSGRSDLRQVMTTETIQHNCDCFKKQMSNFIDFSEGK--AMMVN 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  + YI++LRE+GS FSVNRML+ E  + R+  E+ L+F+EFNYMI+QAYDF  L
Sbjct: 121 NADWLLDLNYIEVLREVGSHFSVNRMLAAECYKQRM--EKGLTFMEFNYMIMQAYDFYAL 178

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            + Y C LQ GG DQWGN++ G +L  R       A+T  LL  + G KMGKT SGA+WL
Sbjct: 179 YQKYGCNLQFGGDDQWGNMLAGTELIRRKLGKDASAMTITLLLNSEGNKMGKTQSGAVWL 238

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           + E TSP++F+QYWRNI DADV+   + LT LP+ EI+ M + +G ++N+AK+I+A E+T
Sbjct: 239 DPEKTSPFDFYQYWRNIADADVLKCIRMLTFLPLEEINAMDEWEGSQLNKAKEILAFELT 298

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTN 366
            M+HG+EEAEKA  +A   F     ++ MPT  ++ +++    + +LTL++K+G  TS +
Sbjct: 299 QMIHGKEEAEKAQESARTLFSQGNAAE-MPTAELTAEDLQENAVDILTLLLKSGLVTSKS 357

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           EARR ++   I ++   +++         F   G + L  GKKN     L
Sbjct: 358 EARRAVEQGGIAVDGEKVTDIHEVFTADAFAGDG-LILKKGKKNFRKVVL 406


>gi|302873572|ref|YP_003842205.1| tyrosyl-tRNA synthetase [Clostridium cellulovorans 743B]
 gi|307688247|ref|ZP_07630693.1| tyrosyl-tRNA synthetase [Clostridium cellulovorans 743B]
 gi|302576429|gb|ADL50441.1| tyrosyl-tRNA synthetase [Clostridium cellulovorans 743B]
          Length = 406

 Score =  502 bits (1294), Expect = e-140,   Method: Composition-based stats.
 Identities = 178/411 (43%), Positives = 263/411 (63%), Gaps = 7/411 (1%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           ++ L  L ERGFI Q ++  E   L  +  +T YIG+D TA SLH GH   +M +  +QK
Sbjct: 2   ANVLDTLLERGFIKQFTHEEETRELLEKEKITFYIGFDPTADSLHVGHFIAMMFMAHMQK 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+PI+L+GGGT+++GDPS + + R+M+  ++I+EN++ +K     FI +   K  A++
Sbjct: 62  AGHRPIALLGGGTAMVGDPSGKTDMRKMLTKEQIEENVKSLKSQMEKFIDFSDDK--AII 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  WL ++ Y+D LR+IG  FSVNRMLS E  + RL  E+ LSFLEFNYM++Q YDF 
Sbjct: 120 VNNADWLLNLNYVDFLRDIGVHFSVNRMLSAECFKQRL--EKGLSFLEFNYMLMQGYDFY 177

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L KNY C +++GG DQW N+I G++L  R +    +A+T  LLT + G KMGKT  GA+
Sbjct: 178 VLNKNYGCIMELGGDDQWSNMIAGVELIRRKEQKPAYAMTCTLLTNSEGKKMGKTEKGAL 237

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
           WL+   T+P++F+QYWRN+DDADV      LT LP+ E+  +  L+ KEINEAKK++A E
Sbjct: 238 WLDPNKTTPFDFYQYWRNVDDADVEKCLALLTFLPIDEVRALGALKDKEINEAKKVLAFE 297

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           IT +VHG+EEAEKA TAA   F   +   ++PT++I++D +  GM L+ ++       S 
Sbjct: 298 ITKLVHGQEEAEKAKTAAEALFGGGVDLSNVPTVTITRDNL--GMALVDILTITKIVPSK 355

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            E RR +    + IN+  I++  + I  ++F   G + +  GKKN     +
Sbjct: 356 GEGRRLITQGGVAINDEKITDFAIAIG-EEFFVDGYMMVKKGKKNFFKVEI 405


>gi|295706895|ref|YP_003599970.1| tyrosyl-tRNA synthetase [Bacillus megaterium DSM 319]
 gi|294804554|gb|ADF41620.1| tyrosyl-tRNA synthetase [Bacillus megaterium DSM 319]
          Length = 419

 Score =  502 bits (1294), Expect = e-140,   Method: Composition-based stats.
 Identities = 160/420 (38%), Positives = 240/420 (57%), Gaps = 11/420 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D L  L  RG I+Q ++ + L  L S+  V  Y G+D TA SLH GH+  +++L   Q+ 
Sbjct: 2   DILQDLEFRGLINQQTDEKGLSELLSKESVRLYCGFDPTADSLHIGHMLPVLILRRFQQA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI+L+GGGT +IGDPS +   R +   + +    E+IKG  S F+ +  G+  A++ 
Sbjct: 62  GHQPIALVGGGTGLIGDPSGKKAERTLNEKETVAMFSERIKGQLSRFLDFEEGENAAVIA 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W+ S+  I  LR+IG  F +N M++ +SV+SR++    +SF EF+YMILQ+YDF+ 
Sbjct: 122 NNYDWIGSLDVITFLRDIGKNFGINYMMAKDSVQSRIES--GISFTEFSYMILQSYDFLN 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGER-LKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           L + Y+C+LQ+GGSDQWGNI  G++L  +  +  K F LT PL+T A GTK GKT  GAI
Sbjct: 180 LYQTYNCKLQIGGSDQWGNITAGLELIRKSEEDAKAFGLTVPLVTKADGTKFGKTEGGAI 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA--KLQGKEINEAKKIIA 303
           WL+ E TSPY F+Q+W N DD DV+ + K  T L   EI+ +A    +  E  EA+K +A
Sbjct: 240 WLDPEKTSPYEFYQFWINTDDRDVIKYLKYFTFLSHEEINELAASAKEAPEKREAQKALA 299

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVS------RGMGLLTLIV 357
             +TT+VHG E  E+A   +   F  SI       I     +V         +GL+ L+V
Sbjct: 300 AAMTTLVHGEEALEQAIRISQALFSGSISELTAEEIKQGFKDVPSYTHTGEDIGLIDLLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           ++  + S  +AR  + + AI +N     + +  +  +D        +  GKK + +    
Sbjct: 360 ESKISPSKRQAREDISNGAIYLNGEREQDLQKTVGAEDRIEGQFTVIRRGKKKYTLIQYA 419


>gi|296877134|ref|ZP_06901174.1| tyrosine--tRNA ligase [Streptococcus parasanguinis ATCC 15912]
 gi|322390724|ref|ZP_08064236.1| tyrosine--tRNA ligase [Streptococcus parasanguinis ATCC 903]
 gi|296431654|gb|EFH17461.1| tyrosine--tRNA ligase [Streptococcus parasanguinis ATCC 15912]
 gi|321142551|gb|EFX38017.1| tyrosine--tRNA ligase [Streptococcus parasanguinis ATCC 903]
          Length = 428

 Score =  502 bits (1294), Expect = e-140,   Method: Composition-based stats.
 Identities = 151/416 (36%), Positives = 226/416 (54%), Gaps = 11/416 (2%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L ERG + Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  G
Sbjct: 13  IFDELKERGLVFQTTDEEALRKALEEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAG 72

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKP +L+GG T +IGDPSF+D  R +   + +QE +  I+G  S F+ +  G   A M+N
Sbjct: 73  HKPYALVGGATGLIGDPSFKDAERSLQTKETVQEWVRSIQGQLSRFLDFENGDNKAEMVN 132

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W  SI +ID LR++G +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF  L
Sbjct: 133 NYDWFGSISFIDFLRDVGKYFTVNAMMSKESVKKRI--ETGISYTEFAYQIMQGYDFYVL 190

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            + ++  LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WL
Sbjct: 191 NQEHNVTLQIGGSDQWGNMTAGTELMRRKADKTGHVMTVPLITDATGKKFGKSEGNAVWL 250

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATE 305
           N + TSPY  +Q+W N+ DAD V F K  T L + EI+ + K      +E  A+KI+A E
Sbjct: 251 NADKTSPYEMYQFWMNVMDADAVRFLKIFTFLSLDEIEEIRKQFEAAPHERLAQKILARE 310

Query: 306 ITTMVHGREEAEKAATAAMECFDMSI-------HSQHMPTISISKDEVSRGMGLLTLIVK 358
           + T+VHG E  ++A     + F  +I         Q +  +   + +    + ++ L+V 
Sbjct: 311 VVTLVHGEEAYKEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVQAEDNLNIVELLVT 370

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           AG   S  +AR  +++ AI +N   I +    +   D        +  GKK + + 
Sbjct: 371 AGVVNSKRQAREDVQNGAIYVNGERIQDLDYVLSDSDKLENELTVIRRGKKKYFVL 426


>gi|229824686|ref|ZP_04450755.1| hypothetical protein GCWU000182_00034 [Abiotrophia defectiva ATCC
           49176]
 gi|229791015|gb|EEP27129.1| hypothetical protein GCWU000182_00034 [Abiotrophia defectiva ATCC
           49176]
          Length = 421

 Score =  502 bits (1294), Expect = e-140,   Method: Composition-based stats.
 Identities = 170/410 (41%), Positives = 248/410 (60%), Gaps = 6/410 (1%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG I Q++N  E+  + ++G    YIG+D TA SLH GH   L L+  LQ  G
Sbjct: 17  VYEELKARGLIAQVTNEEEISKMVNEGKAVFYIGFDPTADSLHVGHFMALCLMKRLQMAG 76

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           +KPI+LMGGGT +IGDPS R + R MM  + I+ N +  K     FI +G GK  A+M+N
Sbjct: 77  NKPIALMGGGTGMIGDPSGRTDMRTMMTKETIEHNCKCFKKQMERFIDFGEGK--AIMVN 134

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  + YI+ LR+IG  FSVNRML+ E  + R+  E+ LSFLEFNYM++Q +DF  L
Sbjct: 135 NADWLLDLNYIEFLRDIGPHFSVNRMLAAECYKQRM--EKGLSFLEFNYMLMQGFDFYML 192

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            + Y C ++ GG DQW N++ G +L  R       A+T  LL  + G KMGKT +GA+WL
Sbjct: 193 YQKYGCNMEFGGDDQWSNMLAGTELIRRKLGKDAHAMTITLLLNSEGKKMGKTANGAVWL 252

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           + E T+PY+F+QYWRN+DD DV+   K LT LP+ EI  M   +G ++NEAK+I+A E+T
Sbjct: 253 DPEKTTPYDFYQYWRNVDDGDVIKCLKLLTFLPIEEILAMEAWEGAKLNEAKEILAFELT 312

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGM-GLLTLIVKAGFATSTN 366
            +VHG EEA KA +AA   F      ++MP+ +IS ++   G+  ++TL+ K+    + +
Sbjct: 313 KLVHGEEEANKAQSAAKALFAGGGSLENMPSFTISMEDARDGVFDIITLLHKSRLVATRS 372

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           E RR ++   + +N+  +++     K ++    G + +  GKK      L
Sbjct: 373 EGRRAVEQGGVVVNDEKVTDFAATFKPEELQGEG-LIVRKGKKKFCKVTL 421


>gi|229048365|ref|ZP_04193933.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus AH676]
 gi|228723090|gb|EEL74467.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus AH676]
          Length = 418

 Score =  502 bits (1294), Expect = e-140,   Method: Composition-based stats.
 Identities = 155/418 (37%), Positives = 228/418 (54%), Gaps = 11/418 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
             L  L  RG I+Q ++   L+ L  +  V  Y G+D TA SLH GH+  +++L   Q  
Sbjct: 2   GILQDLEFRGLINQQTDAEGLEQLLEKESVKLYCGFDPTADSLHIGHMLPVLMLRRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI+L+GGGT +IGDPS +   R +     +    E IK   S+F+++      A M 
Sbjct: 62  GHQPIALVGGGTGMIGDPSGKKAERTLNTKDTVAYYTESIKNQLSNFLEFENVDNPATMA 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL ++  I  LR+IG  F +N ML+ ++V SRL  E  +SF EF+YMILQ+YDF+ 
Sbjct: 122 NNYDWLGNLDVISFLRDIGKNFGLNYMLAKDTVASRL--ETGISFTEFSYMILQSYDFLN 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGER-LKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           L ++++CRLQ+GGSDQWGNI  G++L  +  +  K F LT PL+T + GTK GKT  GAI
Sbjct: 180 LYQHHNCRLQIGGSDQWGNITAGLELIRKSEEDAKAFGLTIPLVTKSDGTKFGKTEGGAI 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIA 303
           WL+ E T+PY F+Q+W N DD DVV + K  T L   EI  + K   +  E   A+K + 
Sbjct: 240 WLDPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLSHEEILELEKQVAEAPEKRAAQKALG 299

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRGMGLLTLIV 357
           +E+T +VHG E  E+A   +   F  S+       I        S +  +    L+ L+V
Sbjct: 300 SEMTKLVHGEEALEQAIKISAALFSGSVAELTASEIEQGFKDVPSVERTAEDTVLIDLLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           ++  + S  +AR  + + AI +N   I      +   D        +  GKK + +  
Sbjct: 360 ESKISPSKRQAREDVTNGAIYVNGERIQALDYVVTENDRIEGKFTIIRRGKKKYFLIR 417


>gi|300856964|ref|YP_003781948.1| tyrosyl-tRNA synthetase [Clostridium ljungdahlii DSM 13528]
 gi|300437079|gb|ADK16846.1| tyrosyl-tRNA synthetase [Clostridium ljungdahlii DSM 13528]
          Length = 406

 Score =  502 bits (1293), Expect = e-140,   Method: Composition-based stats.
 Identities = 182/411 (44%), Positives = 261/411 (63%), Gaps = 11/411 (2%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           MP    +   IL ERG+I Q ++  E+  L  +  VT YIG+D TA SLH GH  Q+M++
Sbjct: 1   MP----NVYDILLERGYIKQSTHEEEIRELLGKEKVTFYIGFDPTADSLHVGHFLQMMVM 56

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            ++Q+ GH+PI+L+GGGT+++GDP+ + + R+M+  ++IQ N E  K  FS  + +   K
Sbjct: 57  HYMQEAGHRPIALLGGGTTMVGDPTGKTDMRKMLSKEQIQHNAECFKKQFSRLVDFKDDK 116

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
             A++ NN  WL ++ YI+ LR+IG  FSVN+ML+ E  + RL+R   LSFLEFNYM++Q
Sbjct: 117 --AILANNADWLLNLNYIEFLRDIGVHFSVNKMLTAECFKQRLER--GLSFLEFNYMLMQ 172

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
            YDF+EL + Y C L++GG DQW NII G++L  + +    F +T  LLT + G KMGKT
Sbjct: 173 GYDFLELNRRYGCVLELGGDDQWSNIIAGVELIRKKEQKPAFGMTFTLLTKSDGKKMGKT 232

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
             GAIWL+ E TSPY F+QYWRNI DADV      LT LPM E+ R+  L G+EINEAKK
Sbjct: 233 EGGAIWLDPEKTSPYEFYQYWRNIGDADVEKCLALLTFLPMDEVKRLGSLPGEEINEAKK 292

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           ++A E+T +VHG +EAEKA  AA   F    + +++PT+ I   E S G  ++ L+    
Sbjct: 293 VLAYEVTKIVHGLKEAEKAKEAAEALFSGGQNMENVPTVEI--GENSLGCSIVELLADLQ 350

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
              S +E RR ++ N + +N+  I++ KL I    F   G + +  GKK +
Sbjct: 351 ILPSKSEVRRLIQQNGLTVNDEKITDPKLLITKDSF-KDGEMLIRRGKKKY 400


>gi|212712058|ref|ZP_03320186.1| hypothetical protein PROVALCAL_03135 [Providencia alcalifaciens DSM
           30120]
 gi|212685580|gb|EEB45108.1| hypothetical protein PROVALCAL_03135 [Providencia alcalifaciens DSM
           30120]
          Length = 428

 Score =  502 bits (1293), Expect = e-140,   Method: Composition-based stats.
 Identities = 157/422 (37%), Positives = 226/422 (53%), Gaps = 13/422 (3%)

Query: 1   MPAFKS--DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLM 58
           M +  S  + +  L ERG + Q+++   L    +QG ++ Y G+D TA SLH GHL  L+
Sbjct: 1   MESLMSSNNLIKQLQERGLVAQVTDEDALAERLAQGPISLYCGFDPTADSLHLGHLVPLL 60

Query: 59  LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT 118
            L   Q  GHKP++L+GG T +IGDPSF+   R++  ++ +QE +EKI+   S F+ +  
Sbjct: 61  CLKRFQLAGHKPVALVGGATGLIGDPSFKATERKLNTTETVQEWVEKIRNQVSPFLSFDC 120

Query: 119 GKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYM 177
           G+  A + NN  W   +  +  LR+IG  FSVN+M++ ESV+ RL R+   +SF EF Y 
Sbjct: 121 GENSARLANNYDWFGKMDVLTFLRDIGKHFSVNQMINRESVKQRLNRDDVGISFTEFAYN 180

Query: 178 ILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
           +LQ YDF  + K     LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T   GTK 
Sbjct: 181 LLQGYDFANMNKEMGVELQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKTDGTKF 240

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ---GKE 294
           GKT  GA+WL+ + TS Y F+Q+W N  DADV  F K  T + +SEID + +     GK 
Sbjct: 241 GKTEGGAVWLDPKKTSQYKFYQFWINTADADVYRFLKFFTFMELSEIDALEEEDKNSGKA 300

Query: 295 INEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSR 348
              A+ ++A E+T +VHG      A       F  ++        + +    I    +  
Sbjct: 301 PR-AQYVLAEEVTKLVHGEAGLAAAKRITESLFSGAVSDLTEADFEQLAQDGIPCIALED 359

Query: 349 GMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGK 408
           G  L   +V +  A S  +AR  + SNA+ IN    +         D        +  GK
Sbjct: 360 GADLQQALVDSELAPSRGQARTAISSNAVSINGQKQTEPMYVFTDADRLFGRYTLIRRGK 419

Query: 409 KN 410
           KN
Sbjct: 420 KN 421


>gi|220929497|ref|YP_002506406.1| tyrosyl-tRNA synthetase [Clostridium cellulolyticum H10]
 gi|219999825|gb|ACL76426.1| tyrosyl-tRNA synthetase [Clostridium cellulolyticum H10]
          Length = 408

 Score =  502 bits (1293), Expect = e-140,   Method: Composition-based stats.
 Identities = 174/412 (42%), Positives = 260/412 (63%), Gaps = 5/412 (1%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S    +L ERGFI QI++  E+  L  +  VT YIG+D TA SLH GH  QLM++  +Q+
Sbjct: 2   SSVFDVLKERGFIAQITHEDEVKKLLGEKKVTFYIGFDPTADSLHIGHFLQLMVMAHMQQ 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH PI L+GGGT+++GDPS +++ R+MM  + I+ N +  K   S FI +   K  A M
Sbjct: 62  AGHIPIVLIGGGTAMVGDPSGKNDMRKMMTREIIKHNADSFKTQISKFIDFSDNK--AFM 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           ++N  WL  + Y+  LR++G  FSVNRML+ E  ++R+  E+ L+FLEFNYM++Q+YDF+
Sbjct: 120 VDNSEWLMELNYVQFLRDVGVHFSVNRMLTAECFKTRM--EKGLTFLEFNYMLMQSYDFL 177

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L + YDC+L++GG DQW NI+ GI+L  + +  +++ +T  LLTT+ G KMGKT +GA+
Sbjct: 178 VLNRKYDCQLELGGDDQWSNILGGINLVRKSEAKEVYGMTFKLLTTSEGKKMGKTENGAV 237

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
           WL+ E T+PY F+QYWRNIDD DV +    +T LPM E+ R+  L+   INEAK ++A E
Sbjct: 238 WLDPEKTTPYEFYQYWRNIDDNDVENCLALMTFLPMDEVRRLGSLKDAGINEAKAVLAYE 297

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           +T +VHG +EA KA  AA   F     S  +P I I+  ++  G+ +  L++ AG   S 
Sbjct: 298 VTKIVHGEDEAGKAKEAAEAIFGGKGKSDSIPFIEINSADLEAGIKIADLLMAAGLTPSK 357

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           +EARR ++   + +N++ I+     +   D    G + L  GKKN +   + 
Sbjct: 358 SEARRAIQQGGVLLNDNKITGFDYTVGTNDLV-NGEMMLQKGKKNFVKIKVV 408


>gi|125717052|ref|YP_001034185.1| tyrosyl-tRNA synthetase [Streptococcus sanguinis SK36]
 gi|125496969|gb|ABN43635.1| Tyrosyl-tRNA synthetase 1, putative [Streptococcus sanguinis SK36]
 gi|325697737|gb|EGD39621.1| tyrosine--tRNA ligase [Streptococcus sanguinis SK160]
 gi|327459248|gb|EGF05596.1| tyrosine--tRNA ligase [Streptococcus sanguinis SK1057]
          Length = 419

 Score =  502 bits (1293), Expect = e-140,   Method: Composition-based stats.
 Identities = 146/416 (35%), Positives = 228/416 (54%), Gaps = 11/416 (2%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L ERG + Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  G
Sbjct: 4   IFDELKERGLVFQTTDEAALRKALEEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAG 63

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKP +L+GG T +IGDPSF+D  R +   + ++  ++ I+   S F+ +  G   A M+N
Sbjct: 64  HKPYALVGGATGLIGDPSFKDAERSLQTKETVEGWVKSIQNQLSRFLDFEKGDNKAEMVN 123

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W  SI +ID LR++G +F+VN M+S +SV+SR+  E  +S+ EF Y I+Q YDF  L
Sbjct: 124 NYDWFSSISFIDFLRDVGKYFTVNYMMSKDSVKSRI--ETGISYTEFAYQIMQGYDFYIL 181

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            +N+   LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WL
Sbjct: 182 NQNHGVTLQIGGSDQWGNMTAGTELLRRKADKTGHVMTVPLITDATGKKFGKSEGNAVWL 241

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATE 305
           N + TSPY  +Q+W N+ DAD + F K  T L + EI+ + +      +E  A+K++A E
Sbjct: 242 NPDKTSPYEMYQFWMNVMDADAIRFLKIFTFLSLDEIEEIRQQFEAAPHERLAQKVLARE 301

Query: 306 ITTMVHGREEAEKAATAAMECFDMSI-------HSQHMPTISISKDEVSRGMGLLTLIVK 358
           + ++VHG+E  ++A     + F  +I         Q +  +   + +V   + ++ L+V 
Sbjct: 302 VVSLVHGQEAYQEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVQVEDNLNIVELLVT 361

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           AG   S  +AR  +++ AI +N   I +    +   D        +  GKK + + 
Sbjct: 362 AGVVNSKRQAREDVQNGAIYLNGERIQDLDYVLSDSDKLEDELTVIRRGKKKYFVL 417


>gi|322515916|ref|ZP_08068857.1| tyrosine--tRNA ligase [Streptococcus vestibularis ATCC 49124]
 gi|322125590|gb|EFX96920.1| tyrosine--tRNA ligase [Streptococcus vestibularis ATCC 49124]
          Length = 438

 Score =  502 bits (1293), Expect = e-140,   Method: Composition-based stats.
 Identities = 151/419 (36%), Positives = 228/419 (54%), Gaps = 17/419 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG I Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  G
Sbjct: 23  IFEELKARGLIFQTTDEEALVKAFEEGPVSYYTGYDPTADSLHLGHLVAILTSRRLQLAG 82

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKP +L+GG T +IGDPSF+D  R +   + ++  +EKI+G  S F+ +  G   A+M+N
Sbjct: 83  HKPYALVGGATGLIGDPSFKDAERSLQTKETVEGWVEKIQGQLSRFLDFENGDNKAVMVN 142

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W  S+ +ID LR++G +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF EL
Sbjct: 143 NYDWFGSVSFIDFLRDVGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFYEL 200

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
              Y   LQ+GGSDQWGN+  G +L  R        +T PL+T ++G K GK+   A+WL
Sbjct: 201 NDKYGVTLQIGGSDQWGNMTAGTELLRRKADKSGHVITVPLITDSTGKKFGKSEGNAVWL 260

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIATE 305
           +   T+PY  +Q+W N+ D D V F K  T L + EI+ + K   Q +    A+K++A E
Sbjct: 261 DSTKTTPYEMYQFWLNVMDDDAVRFLKIFTFLSLEEIEEIGKEFDQARHQRLAQKVLARE 320

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTL 355
           + T+VHG+E  E+A     + F  ++ +            +PT  IS DE    + ++ L
Sbjct: 321 VVTLVHGKEAYEQAVHITEQLFAGNLKALSARDLKVALNGVPTYEISADE---NLNIVEL 377

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +V A  + S  +AR  +++ AI IN   + +    +   D        +  GKK + + 
Sbjct: 378 LVNAKISPSKRQAREDVQNGAIYINGERVQDLDYTLSDTDKIDNEITVIRRGKKKNFVL 436


>gi|159044694|ref|YP_001533488.1| tyrosyl-tRNA synthetase [Dinoroseobacter shibae DFL 12]
 gi|189083648|sp|A8LQM0|SYY_DINSH RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|157912454|gb|ABV93887.1| tyrosyl-tRNA synthetase [Dinoroseobacter shibae DFL 12]
          Length = 417

 Score =  502 bits (1293), Expect = e-140,   Method: Composition-based stats.
 Identities = 216/411 (52%), Positives = 290/411 (70%), Gaps = 2/411 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KSDF+ ++ ERGF+   ++ + LD   S+GVV  YIGYD TA+SLH GHL  +M+L WLQ
Sbjct: 6   KSDFMRVMMERGFLADCTDYQGLDEAMSKGVVPTYIGYDATAASLHVGHLLNIMMLRWLQ 65

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           KTGHKPI+LMGGGT+ +GDPSFR + R ++ +++I  NI  +K +FSS++ YG G TDAL
Sbjct: 66  KTGHKPITLMGGGTTKVGDPSFRSDERPLLGAEQIDANIAGMKQVFSSYLTYGDGPTDAL 125

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           MLNN  WL  + Y++ LR++G  FSVNRMLSFESV+SRL REQSLSFLEFNYMILQAYDF
Sbjct: 126 MLNNAEWLDGLNYLEFLRDVGRHFSVNRMLSFESVKSRLDREQSLSFLEFNYMILQAYDF 185

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL + Y CRLQMGGSDQWGNI+ GIDL  R+   +++ LTSPLLTT+ G KMGK+  GA
Sbjct: 186 MELNRRYGCRLQMGGSDQWGNIVNGIDLTRRILDQEVYGLTSPLLTTSDGRKMGKSQGGA 245

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           IWLN +M SPY FWQ+WRN  DADV  F K  T LP+ E DR+  L G EIN+AK I+A 
Sbjct: 246 IWLNGDMLSPYEFWQFWRNTTDADVGRFLKLYTELPLEECDRLGALAGSEINDAKIILAN 305

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
            +T ++HG E A+ A   A E F+     + +PT++++ DE+  G+ ++ LI ++G A S
Sbjct: 306 AVTALLHGPEAAQAAEATAREVFEKGGAGEDLPTLTLTTDEIGDGISVVQLITRSGLAKS 365

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
             EA+R +  N  K++++ +++  L I      +   IKLS G+K H +  
Sbjct: 366 GKEAKRLIAENGAKLDDAPLTDAGLMIDADRLAAP--IKLSAGRKRHALIK 414


>gi|304404160|ref|ZP_07385822.1| tyrosyl-tRNA synthetase [Paenibacillus curdlanolyticus YK9]
 gi|304347138|gb|EFM12970.1| tyrosyl-tRNA synthetase [Paenibacillus curdlanolyticus YK9]
          Length = 428

 Score =  502 bits (1293), Expect = e-140,   Method: Composition-based stats.
 Identities = 151/422 (35%), Positives = 226/422 (53%), Gaps = 18/422 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D L  L  RG +HQ+++   L     +  +T Y G+D TA SLH G L  ++ L   QK 
Sbjct: 12  DLLEDLEYRGLVHQVTHREGLHEKLQKEPITLYCGFDPTADSLHIGSLLPILCLMRFQKA 71

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH PI+L+GGGT +IGDPS R   R +   + +      ++   S F+ + T    A ++
Sbjct: 72  GHNPIALVGGGTGLIGDPSGRTSERSLNTDETVASWTASLQRQLSRFLDFDTQANPAKLV 131

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           +N  WL S+  I  LR++G +F+VN ML+ +SV SRL     +SF EF+YMI+QAYDF  
Sbjct: 132 SNYDWLASMNIISFLRDVGKYFTVNYMLAKDSVDSRLAN--GISFTEFSYMIMQAYDFSV 189

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + +DC LQ+GGSDQWGNI  G+DL  +L   + F LT PL+T + G K GK+ SGAIW
Sbjct: 190 LREQHDCALQIGGSDQWGNITAGLDLIGKLGGGESFGLTMPLVTKSDGKKFGKSESGAIW 249

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIAT 304
           L+   TS Y F+Q+W N DD+DV+ F K  T L    I  +            A++ +A 
Sbjct: 250 LDSSKTSVYTFYQFWINTDDSDVIKFLKYFTFLSRERIAELEAELQAHPEKRAAQRELAR 309

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLT 354
           E+T +VHG +    A       F   +            + MPT+ ++ +E++    L+ 
Sbjct: 310 EVTRLVHGADALASAEKITEALFSGDVTQLNEAELVEALEGMPTVVLADEEIA----LMD 365

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           L++ A  A S  +AR+ ++S A+ IN    +     +  +       + L  GKKN+ + 
Sbjct: 366 LLIAAKAAPSKRQARQDIESGAVYINGERNTAVDAVLTKEQRLHNQYLVLRRGKKNYYLV 425

Query: 415 HL 416
             
Sbjct: 426 RF 427


>gi|168185553|ref|ZP_02620188.1| tyrosyl-tRNA synthetase [Clostridium botulinum C str. Eklund]
 gi|169296217|gb|EDS78350.1| tyrosyl-tRNA synthetase [Clostridium botulinum C str. Eklund]
          Length = 408

 Score =  502 bits (1292), Expect = e-140,   Method: Composition-based stats.
 Identities = 177/410 (43%), Positives = 259/410 (63%), Gaps = 7/410 (1%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L ERG+I Q ++  E+  L  +  +T YIG+D TA SLH GH   +M +  +QK 
Sbjct: 5   NVFDTLMERGYIKQTTHEEEIRELLGKEKITFYIGFDPTADSLHVGHFIAMMFMAHMQKA 64

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI+L+GGGT++IGDPS + + R+M+  ++I  ++  IK   S FI +  GK  A+++
Sbjct: 65  GHRPIALVGGGTAMIGDPSGKTDMRKMLTKEQIDIHVAGIKKQLSRFIDFSDGK--AILV 122

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL   KY++ +REIG  FSVN+ML+ E  + RL  E+ LSFLEFNYM++QAYDF+E
Sbjct: 123 NNADWLLDAKYVEFIREIGVHFSVNKMLTAECFKQRL--EKGLSFLEFNYMLMQAYDFLE 180

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + Y C +++GG DQW N+I G+DL  R +    FA+T  LLT + G KMGKT+ GA+W
Sbjct: 181 LNRKYGCIMELGGDDQWSNMIAGMDLIRRKERKPAFAMTCSLLTNSEGQKMGKTVGGALW 240

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           LN E TSPY+F+QYWRN+ DADV      LT +PM E+ R++ L+G  INEAKK++A E+
Sbjct: 241 LNAEKTSPYDFYQYWRNVADADVEKCLSLLTFVPMDEVRRLSSLEGSAINEAKKVLAFEV 300

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
           T +VHG EEA+KA TAA   F       ++PTI I K+ V  G  LL +++      S  
Sbjct: 301 TKLVHGEEEAKKAQTAAEALFSGGADMSNVPTIEIEKEAV--GTLLLEILLNGKAIPSKK 358

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           E RR ++   + +N+  +++    ++  D    G+  +  GKK +    +
Sbjct: 359 EGRRLIEQGGLYMNDENVTDSNTVLQELDL-KDGSALIKKGKKKYYRIVV 407


>gi|332799995|ref|YP_004461494.1| Tyrosyl-tRNA synthetase [Tepidanaerobacter sp. Re1]
 gi|332697730|gb|AEE92187.1| Tyrosyl-tRNA synthetase [Tepidanaerobacter sp. Re1]
          Length = 409

 Score =  502 bits (1292), Expect = e-140,   Method: Composition-based stats.
 Identities = 183/410 (44%), Positives = 257/410 (62%), Gaps = 4/410 (0%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +   IL ERGFI Q ++  E+  L  +  V  Y+G+D TA SLH GHL  +M +  +Q+ 
Sbjct: 3   NVYDILKERGFIEQATHEEEIRELLEKEKVVFYVGFDPTADSLHVGHLLPMMAMAHMQRA 62

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH PI+L+GGGT++IGDPS R + R+M+  ++I  N  + K  F   + +   K  A ML
Sbjct: 63  GHVPIALLGGGTAMIGDPSGRTDMRKMLTREQIDYNARQFKKQFEKLLDFSDNK--AYML 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  + YID LRE+G  FSVNRML+ E  + RL  E  L+FLEFNYM++Q+YDF+ 
Sbjct: 121 NNADWLMQLNYIDFLREVGRHFSVNRMLTAECYKQRL--EAGLTFLEFNYMLMQSYDFLH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + Y C+LQMGG+DQW NII G DL  R++    + +T  LLTT+ G KMGKT +GA+W
Sbjct: 179 LYRKYGCKLQMGGNDQWSNIISGADLIRRVEGDSAYGMTFTLLTTSEGIKMGKTQAGALW 238

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           L+ E  SPY+F+QYWRNIDD DV      LT LPM EI R++ L+G +IN+AK+++A E+
Sbjct: 239 LDPEKVSPYDFYQYWRNIDDRDVEKCLSLLTFLPMDEIKRLSSLEGAQINKAKEVLAFEL 298

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
           T M+H  EEA+KA  AA   F        +P   I   ++S GM LL L++  G  +S +
Sbjct: 299 TKMIHSEEEAKKAQEAARALFKDGADMSSVPQTEIDAQKLSDGMELLELLMLTGLTSSKS 358

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           E RR ++   I + +  I + +L+I  +DFD    + L  GKK + +  L
Sbjct: 359 EGRRLIQQGGIYVADKRIDDVELKITAEDFDDDKTLLLRKGKKVYHMVKL 408


>gi|158319957|ref|YP_001512464.1| tyrosyl-tRNA synthetase [Alkaliphilus oremlandii OhILAs]
 gi|158140156|gb|ABW18468.1| tyrosyl-tRNA synthetase [Alkaliphilus oremlandii OhILAs]
          Length = 409

 Score =  502 bits (1292), Expect = e-140,   Method: Composition-based stats.
 Identities = 179/411 (43%), Positives = 253/411 (61%), Gaps = 4/411 (0%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +   +L +RGF+ Q ++  E+  L  +  +T YIG+D TA SLH GH  QLM +  LQK 
Sbjct: 3   NIFDVLKDRGFVKQFTHEDEIRELLGKEKITFYIGFDPTADSLHVGHFVQLMAMSHLQKA 62

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI L GGGT ++GDPS R + R+MM  + IQ N+          I   +  + A++ 
Sbjct: 63  GHRPIFLAGGGTGMVGDPSGRTDMRQMMTPEIIQHNVNCFIDQSKRLIDL-SENSGAIIE 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL S+ YI  +REIG+ FSVNRML+ E  ++R+  E+ LSF EFNYMI+QAYDF+E
Sbjct: 122 NNANWLLSLNYISFIREIGTHFSVNRMLTAECFKNRM--EKGLSFFEFNYMIMQAYDFLE 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + Y CRLQ+GG DQW NII G DL  R+++   + +T  LLTT+ G KMGKT SGA+W
Sbjct: 180 LFRRYGCRLQLGGDDQWSNIIAGADLIRRVESEPAYGMTFTLLTTSEGVKMGKTQSGAVW 239

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           L+ + TSP+ F+QYWRN+ DADV      LT +PM E+ ++  L+G EIN AK+I+A E+
Sbjct: 240 LDPKKTSPFEFYQYWRNVADADVEKCLSLLTFIPMDEVRKLGALEGAEINRAKEILAFEV 299

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
           T +VHG EEA KA  AA   F        +P+  + + E++ G+ ++TL+V A    S  
Sbjct: 300 TKLVHGEEEATKAEEAAKALFGQGALGGSIPSTDLPRSELAEGIDIITLLVTAELIPSRG 359

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           E RR ++   + IN+  I++    I L DF     + +  GKK +    L 
Sbjct: 360 EGRRLIQQGGVAINDEKITDINTVITL-DFFKEDTLMIKKGKKTYHQVKLV 409


>gi|332358495|gb|EGJ36319.1| tyrosine--tRNA ligase [Streptococcus sanguinis SK1056]
          Length = 419

 Score =  502 bits (1292), Expect = e-140,   Method: Composition-based stats.
 Identities = 145/416 (34%), Positives = 227/416 (54%), Gaps = 11/416 (2%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L ERG + Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  G
Sbjct: 4   IFDELKERGLVFQTTDEAALRKALEEGQVSYYSGYDPTADSLHLGHLVAILTSRRLQLAG 63

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKP +L+GG T +IGDPSF+D  R +   + ++  ++ I+   S F+ +  G   A M+N
Sbjct: 64  HKPYALVGGATGLIGDPSFKDAERSLQTKETVEGWVKSIQDQLSRFLDFDKGDNKAEMVN 123

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W  SI +ID LR++G +F+VN M+S +SV+SR+  E  +S+ EF Y I+Q YDF  L
Sbjct: 124 NYDWFSSISFIDFLRDVGKYFTVNYMMSKDSVKSRI--ETGISYTEFAYQIMQGYDFYIL 181

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            +N+   LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WL
Sbjct: 182 NQNHGVTLQIGGSDQWGNMTAGTELLRRKADKTGHVITVPLITDATGKKFGKSEGNAVWL 241

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATE 305
           N + TSPY  +Q+W N+ DAD + F K  T L + EI+ + +      +E  A+K++A E
Sbjct: 242 NPDKTSPYEMYQFWMNVMDADAIRFLKIFTFLSLDEIEEIRQQFEAAPHERLAQKVLARE 301

Query: 306 ITTMVHGREEAEKAATAAMECFDMSI-------HSQHMPTISISKDEVSRGMGLLTLIVK 358
           + ++VHG+E  ++A     + F  +I         Q +  +   + +    + ++ L+V 
Sbjct: 302 VVSLVHGQEAYQEALNITEQLFAGNIKNLSVQELKQGLRGVPNYQVQAEDNLNIVELLVT 361

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           AG   S  +AR  +++ AI +N   I +    +   D        +  GKK + + 
Sbjct: 362 AGVVNSKRQAREDVQNGAIYLNGERIQDLDYVLSASDKLEDELTVIRRGKKKYFVL 417


>gi|271967347|ref|YP_003341543.1| tyrosine--tRNA ligase [Streptosporangium roseum DSM 43021]
 gi|270510522|gb|ACZ88800.1| Tyrosine--tRNA ligase [Streptosporangium roseum DSM 43021]
          Length = 422

 Score =  502 bits (1292), Expect = e-140,   Method: Composition-based stats.
 Identities = 157/421 (37%), Positives = 227/421 (53%), Gaps = 10/421 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +D L  L  R  I Q ++   L    ++G +T Y G+D TA SLHAG+L  L++L   Q+
Sbjct: 2   TDILDELEWRDVIAQTTDADALRTALAEGPITVYGGFDPTAPSLHAGNLATLLILTRFQR 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+PI L+GG T +IGDPS R   R +  S+ + E + +I+     F+ +  G T A +
Sbjct: 62  AGHRPIGLVGGATGLIGDPSGRSTERSLNSSEVVAEWVARIRVQVERFLSFDDGPTGATL 121

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           ++N  W   +  ID LR++G  F VNRML+ ESV +RL     LS+ EF+Y ILQA D++
Sbjct: 122 VSNLDWTSEMSAIDFLRDVGKHFPVNRMLARESVSARL-GGDGLSYTEFSYQILQANDYL 180

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           EL + + C LQ+GGSDQWGNI  G+DL  R++     ALT  L+T A GTK GKT  GAI
Sbjct: 181 ELYRRHGCTLQLGGSDQWGNITAGVDLIRRVEGAHTHALTGKLITKADGTKFGKTAGGAI 240

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIA 303
           WL+  +TSPY F+QYW N DD DVV F K  T     EI  + K         EA++ +A
Sbjct: 241 WLDPALTSPYAFYQYWLNADDRDVVRFLKVFTFRTQDEIAELEKAVADRPAAREAQRTLA 300

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQ------HMPTISISKDEVSR-GMGLLTLI 356
            ++TT+VHG +E  +   A+   F      +            + + EV   G   + L+
Sbjct: 301 EDVTTLVHGADELARVVAASRALFGQGSLEELDARTLGSALAEVPRAEVPALGASFVDLL 360

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            ++G   S + ARR +K     +NN  I++E       D      + L  GK++     +
Sbjct: 361 AESGLVESKSAARRAVKEGGAYLNNVKITDEAYVPSADDLLHGRFLVLRRGKRSIGGVEV 420

Query: 417 C 417
            
Sbjct: 421 T 421


>gi|312172321|emb|CBX80578.1| Tyrosyl-tRNA synthetase [Erwinia amylovora ATCC BAA-2158]
          Length = 425

 Score =  502 bits (1292), Expect = e-140,   Method: Composition-based stats.
 Identities = 157/419 (37%), Positives = 232/419 (55%), Gaps = 11/419 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q 
Sbjct: 4   SNLIKQLQERGLVAQVTDENALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQD 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++  S  + + +EKI+   + F+ +  G   A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTSDTVSDWVEKIRQQVAPFLDFNCGDNSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDF 184
            NN  W  S+  +  LR+IG  FSVN+M++ E+V+ RL R +Q +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGSMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDQGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L + +   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  GA
Sbjct: 184 ACLNERHGVALQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKSDGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + M +I   ++  K  GK    A+ +
Sbjct: 244 VWLDAKKTSPYKFYQFWINTADADVYRFLKFFTFMSMEDINALEQEDKNSGKAPR-AQIV 302

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTL 355
           +A  +T +VHG E    A       F  S+          +    +   E+  G  L   
Sbjct: 303 LAELVTRLVHGEEGLTAAQRITQSLFAGSVTELTAQDLAQLAQDGMPGVELEAGQDLQQA 362

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +V A  A S  +AR+ +++ +I IN S+ ++ +      D        L  GKKN+ + 
Sbjct: 363 LVNAELAPSRGQARKLIEAKSISINGSLQTDAEYAFAENDRLFGQFTLLRRGKKNYSLI 421


>gi|310767575|gb|ADP12525.1| tyrosyl-tRNA synthetase [Erwinia sp. Ejp617]
          Length = 424

 Score =  502 bits (1292), Expect = e-140,   Method: Composition-based stats.
 Identities = 158/419 (37%), Positives = 233/419 (55%), Gaps = 11/419 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q 
Sbjct: 4   SNLIKQLQERGLVAQVTDENALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQD 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++  S+ + + +EKI+   + F+ +  G   AL 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTSETVNDWVEKIRQQVAPFLDFSCGDNSALA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDF 184
            NN  W  S+  +  LR+IG  FSVN+M++ E+V+ RL R +Q +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGSMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDQGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L + +   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  GA
Sbjct: 184 ACLNERHGVALQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKSDGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + +I   ++  K  GK    A+ +
Sbjct: 244 VWLDAKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEDINTLEQEDKNSGKAPR-AQIV 302

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTL 355
           +A  +T +VHG E    A       F  S+          +    +   E+  G+ L   
Sbjct: 303 LAELVTRLVHGEEGLTAAQRITQSLFAGSVTELTAHDLAQLAQDGMPGVELEAGLDLQQA 362

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +V A  A S  +AR+ + + +I IN S+ +N +      D        L  GKKN+ + 
Sbjct: 363 LVNAELAPSRGQARKLIDAKSISINGSLQTNAEYAFAEDDRLFGQYTLLRRGKKNYSLI 421


>gi|228478125|ref|ZP_04062736.1| tyrosyl-tRNA synthetase [Streptococcus salivarius SK126]
 gi|228250305|gb|EEK09558.1| tyrosyl-tRNA synthetase [Streptococcus salivarius SK126]
          Length = 418

 Score =  502 bits (1292), Expect = e-140,   Method: Composition-based stats.
 Identities = 151/419 (36%), Positives = 228/419 (54%), Gaps = 17/419 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG I Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  G
Sbjct: 3   IFEELKARGLIFQTTDEEALVKAFEEGPVSYYTGYDPTADSLHLGHLVAILTSRRLQLAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKP +L+GG T +IGDPSF+D  R +   + ++  +EKI+G  S F+ +  G   A+M+N
Sbjct: 63  HKPYALVGGATGLIGDPSFKDAERSLQTKETVEGWVEKIQGQLSRFLDFENGDNKAVMVN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W  S+ +ID LR++G +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF EL
Sbjct: 123 NYDWFGSVSFIDFLRDVGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFYEL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
              Y   LQ+GGSDQWGN+  G +L  R        +T PL+T ++G K GK+   A+WL
Sbjct: 181 NDKYGVTLQIGGSDQWGNMTAGTELLRRKADKSGHVITVPLITDSTGKKFGKSEGNAVWL 240

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIATE 305
           +   T+PY  +Q+W N+ D D V F K  T L + EI+ + K   Q +    A+K++A E
Sbjct: 241 DATKTTPYEMYQFWLNVMDDDAVRFLKIFTFLSLEEIEEIGKEFDQARHQRLAQKVLARE 300

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTL 355
           + T+VHG+E  E+A     + F  ++ +            +PT  IS DE    + ++ L
Sbjct: 301 VVTLVHGKEAYEQAVHITEQLFAGNLKALSARDLKVALNGVPTYEISADE---NLNIVEL 357

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +V A  + S  +AR  +++ AI IN   + +    +   D        +  GKK + + 
Sbjct: 358 LVNAKISPSKRQAREDVQNGAIYINGERVQDLDYTLSDADKIDNEITVIRRGKKKNFVL 416


>gi|163735823|ref|ZP_02143252.1| tyrosyl-tRNA synthetase, putative [Roseobacter litoralis Och 149]
 gi|161390909|gb|EDQ15249.1| tyrosyl-tRNA synthetase, putative [Roseobacter litoralis Och 149]
          Length = 416

 Score =  502 bits (1292), Expect = e-140,   Method: Composition-based stats.
 Identities = 216/415 (52%), Positives = 289/415 (69%), Gaps = 2/415 (0%)

Query: 3   AFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
             KSDF++++ ERGF+   ++ + LD    +GV +AYIG+D TA SLH G L Q+M+L W
Sbjct: 4   TPKSDFMAVMMERGFMADCTDYQGLDEALLKGVQSAYIGFDATAKSLHVGSLIQIMMLRW 63

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD 122
            QKTGHKP++LMGGGT+ +GDPSFR + R ++  + I +NI  IK +FS++I Y    T 
Sbjct: 64  FQKTGHKPLTLMGGGTTKVGDPSFRADERPLLGPEAIDDNIAGIKQVFSAYIDYSDAPTG 123

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
           ALMLNN  WL ++ Y+D LR+IG  FS+NRMLSFESV+SRL REQSLSFLEFNYMILQAY
Sbjct: 124 ALMLNNAEWLDNLNYLDFLRDIGRHFSINRMLSFESVKSRLDREQSLSFLEFNYMILQAY 183

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DF+EL + Y C LQ+GGSDQWGNI+ GIDL  R+   +++ LTSPLLTT+ G KMGK+ S
Sbjct: 184 DFMELHRRYGCILQLGGSDQWGNIVNGIDLTRRVIDGEVYGLTSPLLTTSDGKKMGKSQS 243

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKII 302
           GA+WLN +M SPY FWQ+WRN  DADV  F K  T LP+ E +R+  L G EIN AK  +
Sbjct: 244 GAVWLNADMFSPYEFWQFWRNTTDADVGRFLKLYTELPLDECERLGALAGSEINAAKITL 303

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFA 362
           A EITT++HG E A  AA  A + F+       +PT+++S ++V++G+ ++ LIVK+G A
Sbjct: 304 ANEITTLLHGAEAAATAAQTAHDVFEKGGVGDDLPTLTLSAEDVAQGISIVQLIVKSGLA 363

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            S  EA+R +  N  K++++ ++N  L I      S   IKLS GKK H +  L 
Sbjct: 364 NSGKEAKRLIAENGAKLDDAPLTNAGLMIDAAALQSP--IKLSAGKKRHAMVQLS 416


>gi|317492097|ref|ZP_07950528.1| tyrosyl-tRNA synthetase [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316919980|gb|EFV41308.1| tyrosyl-tRNA synthetase [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 424

 Score =  502 bits (1292), Expect = e-140,   Method: Composition-based stats.
 Identities = 155/419 (36%), Positives = 228/419 (54%), Gaps = 11/419 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG I Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q 
Sbjct: 4   SNLIKQLQERGLIAQVTDEEALAERLAQGPLALYCGFDPTADSLHLGHLVPLLCLKRFQL 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++     + E ++KI+   + F+ +  G+  A+ 
Sbjct: 64  EGHKPVALVGGATGLIGDPSFKATERKLNTQDTVHEWVDKIRHQVAPFLDFDCGENSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYDF 184
            NN  W  ++  +  LR+IG  FSVN+M++ E+V+ RL R+   +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDVGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L + +   LQ+GGSDQWGNI  GIDL  RL   +++ LT PL+T A GTK GKT  GA
Sbjct: 184 ASLNELHGVELQIGGSDQWGNITSGIDLTRRLHQKQVWGLTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ---GKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + +ID + +     GK    A+ +
Sbjct: 244 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMDLKDIDALEEEDKNSGKAPR-AQYV 302

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTL 355
           +A  +T MVHG E    A       F  ++          +    +   E+ R   L   
Sbjct: 303 LAELVTRMVHGEEGLAAAKRITQSLFSGALSEMTEADFAQLAQDGMPMVELERDADLQQA 362

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +V +    S  +AR+ + SNAI IN    S+ +      D        L  GKKN+ + 
Sbjct: 363 LVDSELQPSRGQARKTIASNAITINGEKQSDPEYTFSDADRLFGRFTLLRRGKKNYCLI 421


>gi|292488183|ref|YP_003531065.1| tyrosyl-tRNA synthetase [Erwinia amylovora CFBP1430]
 gi|292899392|ref|YP_003538761.1| tyrosyl-tRNA synthetase [Erwinia amylovora ATCC 49946]
 gi|291199240|emb|CBJ46356.1| tyrosyl-tRNA synthetase [Erwinia amylovora ATCC 49946]
 gi|291553612|emb|CBA20657.1| Tyrosyl-tRNA synthetase [Erwinia amylovora CFBP1430]
          Length = 425

 Score =  502 bits (1292), Expect = e-140,   Method: Composition-based stats.
 Identities = 157/419 (37%), Positives = 232/419 (55%), Gaps = 11/419 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q 
Sbjct: 4   SNLIKQLQERGLVAQVTDENALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQD 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++  S  + + +EKI+   + F+ +  G   A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTSDTVSDWVEKIRQQVAPFLDFNCGDNSAMA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDF 184
            NN  W  S+  +  LR+IG  FSVN+M++ E+V+ RL R +Q +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGSMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDQGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L + +   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  GA
Sbjct: 184 ACLNERHGVALQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKSDGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + M +I   ++  K  GK    A+ +
Sbjct: 244 VWLDAKKTSPYKFYQFWINTADADVYRFLKFFTFMSMEDINALEQEDKNSGKAPR-AQIV 302

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTL 355
           +A  +T +VHG E    A       F  S+          +    +   E+  G  L   
Sbjct: 303 LAELVTRLVHGEEGLTAARRITQSLFAGSVTELTAQDLAQLAQDGMPGVELEAGQDLQQA 362

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +V A  A S  +AR+ +++ +I IN S+ ++ +      D        L  GKKN+ + 
Sbjct: 363 LVNAELAPSRGQARKLIEAKSISINGSLQTDAEYAFAENDRLFGQFTLLRRGKKNYSLI 421


>gi|83593367|ref|YP_427119.1| tyrosyl-tRNA synthetase [Rhodospirillum rubrum ATCC 11170]
 gi|97201869|sp|Q2RSR3|SYY_RHORT RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|83576281|gb|ABC22832.1| tyrosyl-tRNA synthetase [Rhodospirillum rubrum ATCC 11170]
          Length = 418

 Score =  502 bits (1292), Expect = e-140,   Method: Composition-based stats.
 Identities = 210/416 (50%), Positives = 282/416 (67%), Gaps = 1/416 (0%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M A KS+FL+++ +RGFIHQ ++   LD L ++G V+AYIG+D TA SLH G L Q+MLL
Sbjct: 1   MTAPKSEFLAVVRDRGFIHQCTDLDGLDALLAKGPVSAYIGFDCTADSLHVGSLIQIMLL 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            WLQ+TGH+P+ LMGGGT+ IGDPSFRDE+R ++  ++I +N+  I+ +FS F+ +G G 
Sbjct: 61  HWLQRTGHRPVVLMGGGTTRIGDPSFRDEARPLLTDEKIGQNMAGIRQVFSRFLSFGEGA 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           TDA+M+NN  WL  + YI  LR+ G  FSVNRML+F+SVR RL REQ LSFLEFNYMILQ
Sbjct: 121 TDAVMVNNADWLDGLAYIPFLRDFGRHFSVNRMLTFDSVRLRLDREQPLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDF+EL +    RLQMGGSDQWGNI+ G++LG R+   +LF LTSPL+TTASG KMGKT
Sbjct: 181 AYDFLELGRRTGVRLQMGGSDQWGNIVNGVELGRRVDGLELFGLTSPLITTASGAKMGKT 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
             GA+WLN+     Y++WQ+WRN +DADV  F +  T LP+ E+ R+  L G EINEAKK
Sbjct: 241 AQGAVWLNEARLPAYDYWQFWRNTEDADVGRFLRLFTDLPLDEVARLEALGGAEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+A   TTM HG E A  AA  A + F+       +PT  ++ + ++ G+ L  ++   G
Sbjct: 301 ILAERATTMAHGPEAALTAAETARKVFEQGGTGDALPTHDVAAEALAAGLPLAEMMRATG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            A S  E +R +     +IN+  +S+    +   D    G IKLS GKK H +  +
Sbjct: 361 LAASGKEVKRLVSEGGARINDVAVSDAARLLGPAD-VQDGAIKLSAGKKRHALIRV 415


>gi|324990487|gb|EGC22425.1| tyrosine--tRNA ligase [Streptococcus sanguinis SK353]
          Length = 419

 Score =  502 bits (1292), Expect = e-140,   Method: Composition-based stats.
 Identities = 145/416 (34%), Positives = 227/416 (54%), Gaps = 11/416 (2%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L ERG + Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  G
Sbjct: 4   IFDELKERGLVFQTTDEAALRKALEEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAG 63

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKP +L+GG T +IGDPSF+D  R +   + ++  ++ I+   S F+ +  G   A M+N
Sbjct: 64  HKPYALVGGATGLIGDPSFKDAERSLQTKETVEGWVKSIQNQLSRFLDFEKGDNKAEMVN 123

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W  SI +ID LR++G +F+VN M+S +SV+SR+  E  +S+ EF Y I+Q YDF  L
Sbjct: 124 NYDWFSSISFIDFLRDVGKYFTVNYMMSKDSVKSRI--ETGISYTEFAYQIMQGYDFYIL 181

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            +N+   LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WL
Sbjct: 182 NQNHGVTLQIGGSDQWGNMTAGTELLRRKADKTGHVMTVPLITDATGKKFGKSEGNAVWL 241

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATE 305
           N + TSPY  +Q+W N+ DAD + F K  T L + EI+ + +      +E  A+K++A E
Sbjct: 242 NPDKTSPYEMYQFWMNVMDADAIRFLKIFTFLSLDEIEEIRQQFEAAPHERLAQKVLARE 301

Query: 306 ITTMVHGREEAEKAATAAMECFDMSI-------HSQHMPTISISKDEVSRGMGLLTLIVK 358
           + ++VHG+E  ++A     + F  +I         Q +  +   + +    + ++ L+V 
Sbjct: 302 VVSLVHGQEAYQEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVQAEDNLNIVELLVT 361

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           AG   S  +AR  +++ AI +N   I +    +   D        +  GKK + + 
Sbjct: 362 AGVVNSKRQAREDVQNGAIYLNGERIQDLDYVLSASDKLEDELTVIRRGKKKYFVL 417


>gi|332358433|gb|EGJ36258.1| tyrosine--tRNA ligase [Streptococcus sanguinis SK49]
          Length = 419

 Score =  501 bits (1291), Expect = e-140,   Method: Composition-based stats.
 Identities = 146/416 (35%), Positives = 228/416 (54%), Gaps = 11/416 (2%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L ERG + Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  G
Sbjct: 4   IFDELKERGLVFQTTDEAALRKALEEGQVSYYSGYDPTADSLHLGHLVAILTSRRLQLAG 63

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKP +L+GG T +IGDPSF+D  R +   + ++  ++ I+   S F+ +  G   A M+N
Sbjct: 64  HKPYALVGGATGLIGDPSFKDAERSLQTKETVEGWVKSIQDQLSRFLDFEKGDNKAEMVN 123

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W  SI +ID LR++G +F+VN M+S +SV+SR+  E  +S+ EF Y I+Q YDF  L
Sbjct: 124 NYDWFSSISFIDFLRDVGKYFTVNYMMSKDSVKSRI--ETGISYTEFAYQIMQGYDFYIL 181

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            +N+   LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WL
Sbjct: 182 NQNHGVTLQIGGSDQWGNMTAGTELLRRKADKTGHVMTVPLITDATGKKFGKSEGNAVWL 241

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATE 305
           N + TSPY  +Q+W N+ DAD + F K  T L + EI+ + +      +E  A+K++A E
Sbjct: 242 NPDKTSPYEMYQFWMNVMDADAIRFLKIFTFLSLDEIEEIRQQFEAAPHERLAQKVLARE 301

Query: 306 ITTMVHGREEAEKAATAAMECFDMSI-------HSQHMPTISISKDEVSRGMGLLTLIVK 358
           + ++VHG+E  ++A     + F  +I         Q +  +   + +V   + ++ L+V 
Sbjct: 302 VVSLVHGQEAYQEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVQVEDNLNIVELLVT 361

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           AG   S  +AR  +++ AI +N   I +    +   D        +  GKK + + 
Sbjct: 362 AGVVNSKRQAREDVQNGAIYLNGERIQDLDYVLSDSDKLEDELTVIRRGKKKYFVL 417


>gi|312862486|ref|ZP_07722729.1| tyrosine--tRNA ligase [Streptococcus vestibularis F0396]
 gi|311102129|gb|EFQ60329.1| tyrosine--tRNA ligase [Streptococcus vestibularis F0396]
          Length = 418

 Score =  501 bits (1291), Expect = e-140,   Method: Composition-based stats.
 Identities = 151/419 (36%), Positives = 228/419 (54%), Gaps = 17/419 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG I Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  G
Sbjct: 3   IFEELKARGLIFQTTDEEALVKAFEEGPVSYYTGYDPTADSLHLGHLVAILTSRRLQLAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKP +L+GG T +IGDPSF+D  R +   + ++  +EKI+G  S F+ +  G   A+M+N
Sbjct: 63  HKPYALVGGATGLIGDPSFKDAERSLQTKETVEGWVEKIQGQLSRFLDFENGDNKAVMVN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W  S+ +ID LR++G +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF EL
Sbjct: 123 NYDWFGSVSFIDFLRDVGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFYEL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
              Y   LQ+GGSDQWGN+  G +L  R        +T PL+T ++G K GK+   A+WL
Sbjct: 181 NDKYGVTLQIGGSDQWGNMTAGTELLRRKADKSGHVITVPLITDSTGKKFGKSEGNAVWL 240

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIATE 305
           +   T+PY  +Q+W N+ D D V F K  T L + EI+ + K   Q +    A+K++A E
Sbjct: 241 DATKTTPYEMYQFWLNVMDDDAVRFLKIFTFLSLEEIEEIGKEFDQARHQRLAQKVLARE 300

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTL 355
           + T+VHG+E  E+A     + F  ++ +            +PT  IS DE    + ++ L
Sbjct: 301 VVTLVHGKEAYEQAVHITEQLFAGNLKALSARDLKVALNGVPTYEISADE---NLNIVEL 357

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +V A  + S  +AR  +++ AI IN   + +    +   D        +  GKK + + 
Sbjct: 358 LVNAKISPSKRQAREDVQNGAIYINGERVQDLDYTLSDTDKIDNEITVIRRGKKKNFVL 416


>gi|296445288|ref|ZP_06887247.1| tyrosyl-tRNA synthetase [Methylosinus trichosporium OB3b]
 gi|296257243|gb|EFH04311.1| tyrosyl-tRNA synthetase [Methylosinus trichosporium OB3b]
          Length = 450

 Score =  501 bits (1291), Expect = e-140,   Method: Composition-based stats.
 Identities = 212/409 (51%), Positives = 290/409 (70%), Gaps = 1/409 (0%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+FL+ L  RGF+HQ S+   LD     G + AY+G+D TA+SLH G+L  +M+L WLQK
Sbjct: 38  SEFLATLIARGFVHQCSDFSGLDEKACSGDLVAYVGFDCTAASLHVGNLLSIMMLAWLQK 97

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
           TG KP+ L+GGGT+ +GDPS +DESR+++  + I  N   I+  F  F+ +G  KTDA++
Sbjct: 98  TGGKPLPLVGGGTTRVGDPSGKDESRKLLTIETIDANKAAIQKTFEKFLAFGARKTDAVL 157

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           L+N  WL  + YID LR++G  FSVNRMLS +SV+ RL REQ LSF+EFNYM LQ+YDFV
Sbjct: 158 LDNAEWLTKLNYIDFLRDVGRHFSVNRMLSMDSVKLRLDREQELSFIEFNYMCLQSYDFV 217

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           E+AK Y   LQMGGSDQWGNI+ G+DLG RL T +L+ALT+PLLTT+SG KMGKT +GA+
Sbjct: 218 EIAKRYGASLQMGGSDQWGNIVMGVDLGRRLGTHQLYALTAPLLTTSSGAKMGKTAAGAV 277

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
           WL+  M SPY++WQ+WRN++DADV+ F K  T LP+ EI+++A L G EINEAKK +ATE
Sbjct: 278 WLDASMLSPYDYWQFWRNVEDADVLRFLKLFTFLPLDEIEKLAALGGAEINEAKKALATE 337

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
            T ++HGRE AE AA  A   F+    +  +P +++   E S G+G+L+  VKAG   ST
Sbjct: 338 ATALLHGREAAEAAAETARRTFEEGALALSLPRVAVPAAEWSAGLGVLSAFVKAGLVAST 397

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            EARR +KS  +++N+  +++EK  +   +    G +KLS GKK H++ 
Sbjct: 398 GEARRQIKSGGLRLNDEPVTDEKATLGDANLV-DGVVKLSLGKKRHVLL 445


>gi|259908529|ref|YP_002648885.1| tyrosyl-tRNA synthetase [Erwinia pyrifoliae Ep1/96]
 gi|224964151|emb|CAX55658.1| Tyrosyl-tRNA synthetase [Erwinia pyrifoliae Ep1/96]
 gi|283478489|emb|CAY74405.1| tyrS [Erwinia pyrifoliae DSM 12163]
          Length = 424

 Score =  501 bits (1291), Expect = e-140,   Method: Composition-based stats.
 Identities = 158/419 (37%), Positives = 232/419 (55%), Gaps = 11/419 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q 
Sbjct: 4   SNLIKQLQERGLVAQVTDENALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQD 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++  S+ + + +EKI+   + F+ +  G   AL 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTSETVNDWVEKIRQQVAPFLDFNCGDNSALA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDF 184
            NN  W  S+  +  LR+IG  FSVN+M++ E+V+ RL R +Q +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGSMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDQGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L   +   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  GA
Sbjct: 184 ACLNDRHGVALQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKSDGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + +I   ++  K  GK    A+ +
Sbjct: 244 VWLDAKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEDINTLEQEDKNSGKAPR-AQIV 302

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTL 355
           +A  +T +VHG E    A       F  S+          +    +   E+  G+ L   
Sbjct: 303 LAELVTRLVHGEEGLTAAQRITQSLFAGSVTELTAHDLAQLAQDGMPGVELEAGLDLQQA 362

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +V A  A S  +AR+ + + +I IN S+ +N +      D        L  GKKN+ + 
Sbjct: 363 LVNAELAPSRGQARKLIDAKSISINGSLQTNAEYAFAEDDRLFGQYTLLRRGKKNYSLI 421


>gi|322374092|ref|ZP_08048626.1| tyrosine--tRNA ligase [Streptococcus sp. C150]
 gi|321277058|gb|EFX54129.1| tyrosine--tRNA ligase [Streptococcus sp. C150]
          Length = 418

 Score =  501 bits (1291), Expect = e-140,   Method: Composition-based stats.
 Identities = 153/419 (36%), Positives = 228/419 (54%), Gaps = 17/419 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG I Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  G
Sbjct: 3   IFEELKARGLIFQTTDEEALVKAFEEGPVSYYTGYDPTADSLHLGHLVAILTSRRLQLAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKP +L+GG T +IGDPSF+D  R +   + ++  +EKI+G  S F+ +  G   A+M+N
Sbjct: 63  HKPYALVGGATGLIGDPSFKDAERSLQTKETVEGWVEKIQGQLSRFLDFENGDNKAVMVN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W  S+ +ID LR++G +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF EL
Sbjct: 123 NYDWFGSVSFIDFLRDVGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFYEL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
              Y   LQ+GGSDQWGN+  G +L  R        +T PL+T ++G K GK+   A+WL
Sbjct: 181 NDKYGVTLQIGGSDQWGNMTAGTELLRRKADKSGHVITVPLITDSTGKKFGKSEGNAVWL 240

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIATE 305
           +   T+PY  +Q+W N+ D D V F K  T L + EI+ + K   Q +    A+KI+A E
Sbjct: 241 DATKTTPYEMYQFWLNVMDDDAVRFLKIFTFLSLEEIEEIGKEFDQARHQRLAQKILARE 300

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTL 355
           + T+VHG+E  E+A     + F  ++ +            +PT  IS DE    + ++ L
Sbjct: 301 VVTLVHGKEAYEQAVHITEQLFAGNLKALSARDLKVALHGVPTYEISADE---NLNIVEL 357

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +V A  + S  +AR  +++ AI IN   I +    +   D        +  GKK + + 
Sbjct: 358 LVNAKISPSKRQAREDVQNGAIYINGERIQDLDYTLSDSDKIDNEITVIRRGKKKNFVL 416


>gi|258543630|ref|YP_003189063.1| tyrosyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-01]
 gi|256634708|dbj|BAI00684.1| tyrosyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-01]
 gi|256637764|dbj|BAI03733.1| tyrosyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-03]
 gi|256640818|dbj|BAI06780.1| tyrosyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-07]
 gi|256643873|dbj|BAI09828.1| tyrosyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-22]
 gi|256646928|dbj|BAI12876.1| tyrosyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-26]
 gi|256649981|dbj|BAI15922.1| tyrosyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-32]
 gi|256652971|dbj|BAI18905.1| tyrosyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-01-42C]
 gi|256656025|dbj|BAI21952.1| tyrosyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-12]
          Length = 422

 Score =  501 bits (1291), Expect = e-140,   Method: Composition-based stats.
 Identities = 196/415 (47%), Positives = 281/415 (67%), Gaps = 2/415 (0%)

Query: 3   AFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
            FKS F+   + RGFI Q ++   LD L ++  V AYIG+D TA SLH G L Q+M+L  
Sbjct: 5   GFKSSFMREAAARGFIFQCTDADALDALMAEKSVAAYIGFDPTADSLHVGSLIQIMMLRL 64

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD 122
           LQK GH+PI+L+GGGT+ IGDPSFR+E+RR+M    IQ N+  I+G    F+ +G+G ++
Sbjct: 65  LQKHGHRPIALVGGGTARIGDPSFREEARRLMTEDIIQTNLAGIEGCLRQFLTFGSGASE 124

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
           A ++NN  WL  + YIDLLR++G  FS+NRML+F+SV++RL+REQ L+FLEFNY ILQ+Y
Sbjct: 125 AALVNNADWLDKLAYIDLLRDVGVHFSINRMLAFDSVKNRLEREQGLTFLEFNYSILQSY 184

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DF EL +  +  LQ+GGSDQWGNII G++L  R     +  LT+PLLTT+SG KMGKT +
Sbjct: 185 DFRELNRRMNVVLQLGGSDQWGNIISGVELVRRTDQKSVMGLTTPLLTTSSGAKMGKTAN 244

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKII 302
           GA+WL+++    +++WQ+WRN +DADV  F +  T LP+ E  R+  LQG EINEAKK++
Sbjct: 245 GAVWLSEKRLPVFDYWQFWRNTEDADVGRFLRLFTELPLEECARLEALQGAEINEAKKVL 304

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMS-IHSQHMPTISISKDEVSRGMGLLTLIVKAGF 361
           ATE T + HGR  A  AA AA + F+   + +  +P   +++ +++ G+ +  L  +AG 
Sbjct: 305 ATEATALCHGRNAALAAAEAARQTFEEGRVAAADLPVHEVAEADMAAGIPVFRLFAEAGL 364

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             +  EARR ++    ++NN +I +E   I  QD    G IKLS GKK+H++  +
Sbjct: 365 VKTNGEARRLVRGGGARLNNDVIQDENKLITQQDMV-DGAIKLSAGKKHHVLVKV 418


>gi|328945418|gb|EGG39571.1| tyrosine--tRNA ligase [Streptococcus sanguinis SK1087]
          Length = 419

 Score =  501 bits (1291), Expect = e-140,   Method: Composition-based stats.
 Identities = 145/416 (34%), Positives = 227/416 (54%), Gaps = 11/416 (2%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L ERG + Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  G
Sbjct: 4   IFDELKERGLVFQTTDEAALRKALEEGQVSYYSGYDPTADSLHLGHLVAILTSRRLQLAG 63

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKP +L+GG T +IGDPSF+D  R +   + ++  ++ I+   S F+ +  G   A M+N
Sbjct: 64  HKPYALVGGATGLIGDPSFKDAERSLQTKETVEGWVKSIQDQLSRFLDFEKGDNKAEMVN 123

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W  SI +ID LR++G +F+VN M+S +SV+SR+  E  +S+ EF Y I+Q YDF  L
Sbjct: 124 NYDWFSSISFIDFLRDVGKYFTVNYMMSKDSVKSRI--ETGISYTEFAYQIMQGYDFYVL 181

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            +N+   LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WL
Sbjct: 182 NQNHGVTLQIGGSDQWGNMTAGTELLRRKADKTGHVITVPLITDATGKKFGKSEGNAVWL 241

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATE 305
           N + TSPY  +Q+W N+ DAD + F K  T L + EI+ + +      +E  A+K++A E
Sbjct: 242 NPDKTSPYEMYQFWMNVMDADAIRFLKIFTFLSLDEIEEIRQQFEAAPHERLAQKVLARE 301

Query: 306 ITTMVHGREEAEKAATAAMECFDMSI-------HSQHMPTISISKDEVSRGMGLLTLIVK 358
           + ++VHG+E  ++A     + F  +I         Q +  +   + +    + ++ L+V 
Sbjct: 302 VVSLVHGQEAYQEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVQAEDNLNIVELLVT 361

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           AG   S  +AR  +++ AI +N   I +    +   D        +  GKK + + 
Sbjct: 362 AGVVNSKRQAREDVQNGAIYLNGERIQDLDYVLSASDKLEDELTVIRRGKKKYFVL 417


>gi|15892746|ref|NP_360460.1| tyrosyl-tRNA synthetase [Rickettsia conorii str. Malish 7]
 gi|25009439|sp|Q92HE8|SYY_RICCN RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|15619924|gb|AAL03361.1| tyrosyl-tRNA synthetase [Rickettsia conorii str. Malish 7]
          Length = 411

 Score =  501 bits (1291), Expect = e-140,   Method: Composition-based stats.
 Identities = 189/409 (46%), Positives = 281/409 (68%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           F+     +G+ HQ ++   L  +  +  + AYIG+D TA+SLH G L Q+M+L  LQ+ G
Sbjct: 3   FIEEFINKGYFHQCTDLDRLTAITKETKIAAYIGFDCTATSLHIGSLMQIMILRLLQQHG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKPI ++GGGTS IGDP+++DE R+++  ++I +N E IK   S FIK+G GK+DA+ML+
Sbjct: 63  HKPIVIIGGGTSKIGDPTWKDEVRKILSKEDIAKNAEGIKKSLSKFIKFGDGKSDAIMLD 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL S  Y+D LR+ GS+FSVNRML+ +SV+ RL+REQ LSFLEFNYM+LQAYDF  L
Sbjct: 123 NAEWLDSFNYLDFLRDFGSYFSVNRMLTMDSVKLRLEREQHLSFLEFNYMLLQAYDFYYL 182

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
           +K+Y+C LQ+GGSDQWGNI+ G DL  ++   ++F +T+PLLTT+SG KMGKT +GA+WL
Sbjct: 183 SKHYNCSLQLGGSDQWGNIVMGADLIRKISGKEVFGMTTPLLTTSSGAKMGKTAAGAVWL 242

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           N+++ SPY+++QYWRN +DAD+V FAK  +     E++R   L  ++IN AKK +A E+T
Sbjct: 243 NEDLLSPYDYYQYWRNCEDADIVRFAKLYSEFTQEELNRFESLAAEDINAAKKQLAYELT 302

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
            + H  + A+ A   A++ F+     +++PT+ + ++ +  G+    L  +AG ATS +E
Sbjct: 303 KLCHSEQAAKSALETAVKIFEEGQIDENLPTVVLEQEVLQAGISAYELFHEAGLATSKSE 362

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           AR+ ++ N  KIN+ ++ +E + I          IKLS GKK HI+  +
Sbjct: 363 ARKLIRGNGAKINDRLVEDENMIINTNFLLDKKVIKLSAGKKKHILVRV 411


>gi|319940289|ref|ZP_08014641.1| tyrosyl-tRNA synthetase [Streptococcus anginosus 1_2_62CV]
 gi|319810591|gb|EFW06927.1| tyrosyl-tRNA synthetase [Streptococcus anginosus 1_2_62CV]
          Length = 418

 Score =  501 bits (1291), Expect = e-140,   Method: Composition-based stats.
 Identities = 149/419 (35%), Positives = 227/419 (54%), Gaps = 17/419 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L ERG + Q ++   L    ++G V+ Y GYD TA SLH GHL  ++++  LQ  G
Sbjct: 3   IFDELKERGLVFQTTDEEALRKALAEGNVSFYSGYDPTADSLHLGHLVPILVMKHLQLAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKP +L+GG T +IGDPSF+D  R +     ++  +  I+   S F+ +  G   A M+N
Sbjct: 63  HKPYALVGGATGLIGDPSFKDTERSLQTKDTVEGWVRSIQAQVSRFLDFENGDNKAEMVN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W   I +ID LR++G +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF EL
Sbjct: 123 NYDWFSDISFIDFLRDVGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFFEL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            + Y   LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WL
Sbjct: 181 NRRYGVTLQIGGSDQWGNMTAGTELLRRKADKTAHVITVPLITDATGKKFGKSEGNAVWL 240

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATE 305
           N + TSPY  +Q+W N+ DAD V F K  T LP+ EI+ + K      +E  A+KI+A E
Sbjct: 241 NADKTSPYEMYQFWMNVMDADAVRFLKIFTLLPLDEIEEIGKQFEAAPHERLAQKILARE 300

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTL 355
           + T+VHG +  ++A     + F  +I +          + +P   +  D+    + ++ L
Sbjct: 301 VVTLVHGEKAYKEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVKADD---NLNIVEL 357

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +V A    S  +AR  +++ AI +N   I +    +   D        +  GKK + + 
Sbjct: 358 LVTASVVNSKRQAREDVQNGAIYVNGDRIQDLDYTLTDADKLENELTVIRRGKKKYFVL 416


>gi|162148158|ref|YP_001602619.1| tyrosyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5]
 gi|161786735|emb|CAP56318.1| putative tyrosyl-tRNA synthetase [Gluconacetobacter diazotrophicus
           PAl 5]
          Length = 413

 Score =  501 bits (1291), Expect = e-140,   Method: Composition-based stats.
 Identities = 205/415 (49%), Positives = 274/415 (66%), Gaps = 4/415 (0%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           MP  KS+FL     RGFI Q ++   LD     G V  YIG+D TA SLH G L Q+M+L
Sbjct: 1   MP--KSEFLQEAEARGFIFQCTDIDALDAALQAGPVAGYIGFDPTADSLHVGSLIQIMML 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             +QK GH+P++LMGGGT+ IGDPSFR+E+R++M  + I  N+  I+G    F+++  G 
Sbjct: 59  RLMQKHGHRPVALMGGGTAKIGDPSFREEARQLMTDETIAANLRGIEGCLRQFLQF-DGA 117

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
             A + NN  WL  + YIDLLR++G  FSVNRML+F+SVRSRL+REQ L+FLEFNY ILQ
Sbjct: 118 AGARLANNADWLDRLSYIDLLRDVGVHFSVNRMLAFDSVRSRLEREQGLTFLEFNYSILQ 177

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           +YDF EL++     LQMGGSDQWGNI+ GIDL  R    ++F LT+PLLTTASG KMGK+
Sbjct: 178 SYDFRELSRTQGVTLQMGGSDQWGNIVSGIDLVRRTDQKQVFGLTTPLLTTASGAKMGKS 237

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
             GAIWL+      + +WQ+WRN+DDADV  F +  T LP++E DR+A L G EINEAKK
Sbjct: 238 ARGAIWLSASRLPIFEYWQFWRNVDDADVGRFLRLFTDLPIAECDRLAALGGTEINEAKK 297

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           ++ATE T + HGR EA+ AA AA   F+       +P  +I+ D ++ G+    L V++G
Sbjct: 298 VLATEATALCHGRAEADAAAEAARRTFEDGAAPAALPGTTIAADLLAAGIPAFRLFVESG 357

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            A S  EARR ++    +IN+  + +E   I   D  + G IKLS G+K+HI+  
Sbjct: 358 MAASNGEARRLIRGGGARINDVAVQDEGQVITTTDL-ADGAIKLSSGRKHHILVR 411


>gi|293364670|ref|ZP_06611391.1| tyrosine--tRNA ligase [Streptococcus oralis ATCC 35037]
 gi|307702926|ref|ZP_07639874.1| tyrosyl-tRNA synthetase [Streptococcus oralis ATCC 35037]
 gi|291316928|gb|EFE57360.1| tyrosine--tRNA ligase [Streptococcus oralis ATCC 35037]
 gi|307623606|gb|EFO02595.1| tyrosyl-tRNA synthetase [Streptococcus oralis ATCC 35037]
          Length = 418

 Score =  501 bits (1291), Expect = e-140,   Method: Composition-based stats.
 Identities = 151/419 (36%), Positives = 228/419 (54%), Gaps = 17/419 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L ERG I Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  G
Sbjct: 3   IFDELKERGLIFQTTDEEALRKALEEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKP +L+GG T +IGDPSF+D  R +     +   ++ I+G  S F+ +  G+  A+M+N
Sbjct: 63  HKPYALVGGATGLIGDPSFKDAERSLQTKDTVDGWVKSIQGQLSRFLDFENGENKAVMVN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W  SI +ID LR++G +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF  L
Sbjct: 123 NYDWFGSISFIDFLRDVGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFFVL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            ++++  LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WL
Sbjct: 181 NQDHNVTLQIGGSDQWGNMTAGTELLRRKADKTAHVITVPLITDATGKKFGKSEGNAVWL 240

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATE 305
           N E TSPY  +Q+W N+ DAD V F K  T L + EI+ + K      +E  A+K++A E
Sbjct: 241 NPEKTSPYEMYQFWMNVMDADAVRFLKIFTFLSLDEIEDIRKQFEAAPHERLAQKVLARE 300

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTL 355
           + T+VHG E  ++A     + F  +I +          + +P   +  DE      ++ L
Sbjct: 301 VVTLVHGEEAYKEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVQADE---NHNIVEL 357

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +V +G   S  +AR  +++ AI +N   I +    +   D        +  GKK + + 
Sbjct: 358 LVSSGVVNSKRQAREDVQNGAIYVNGDRIQDLDYVLSDADKLENELTVIRRGKKKYFVL 416


>gi|156741773|ref|YP_001431902.1| tyrosyl-tRNA synthetase [Roseiflexus castenholzii DSM 13941]
 gi|189029767|sp|A7NK64|SYY_ROSCS RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|156233101|gb|ABU57884.1| tyrosyl-tRNA synthetase [Roseiflexus castenholzii DSM 13941]
          Length = 424

 Score =  501 bits (1291), Expect = e-140,   Method: Composition-based stats.
 Identities = 165/423 (39%), Positives = 252/423 (59%), Gaps = 15/423 (3%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L  RG +++ S+   LD L  +  VT YIG+D +A SLH GHL  L+ L   Q+ G
Sbjct: 4   ILDELRWRGLLYESSD--GLDDLLERERVTLYIGFDPSADSLHIGHLLPLLTLARFQRWG 61

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H PI+L GGGT +IGDPS + + R ++  +++  N+E IK   + F+ +  G   A++LN
Sbjct: 62  HTPIALAGGGTGLIGDPSGKTQERPLLSKEQVAANVEAIKRQLAQFLDFNAGDHSAMLLN 121

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  +  +D LR++G   +VN ML+ +SVRSR+  E  +SF EF+YM+LQAYDF  L
Sbjct: 122 NAEWLTRLSLMDFLRDVGKHLTVNYMLAKDSVRSRMMSETGISFTEFSYMLLQAYDFAYL 181

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            ++Y C+LQ GGSDQWGNI  GI+L  R    K + L  PL+T A GTK GKT SGA+WL
Sbjct: 182 FEHYGCKLQAGGSDQWGNITAGIELIRRTSGQKAYGLVYPLVTKADGTKFGKTESGAVWL 241

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIATE 305
           + + TSPY F+Q+W N+DDADV  + +  T L  +EI+ + ++  ++     A++ +A E
Sbjct: 242 DPKRTSPYRFYQFWYNVDDADVGKYLRYFTWLSAAEIEELEQITARQPERRTAQQRLARE 301

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVS-RGMGLLT 354
           +T MVHG     +A  A+   F  S+ S          + +P+I++ + ++   GM L+ 
Sbjct: 302 VTRMVHGEAALARAEEASQALFGGSLASLSADDVADIFEDVPSITLPRQDLEGDGMSLID 361

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +V+ G ATS ++ARR ++   I INN   ++   ++ L D      I L  G++++ + 
Sbjct: 362 ALVRCGIATSKSDARRAIEGGGIYINNVQSADVGRRLTLHDSIDGQCIVLRKGRRHYHLI 421

Query: 415 HLC 417
            L 
Sbjct: 422 RLV 424


>gi|307295465|ref|ZP_07575301.1| tyrosyl-tRNA synthetase [Sphingobium chlorophenolicum L-1]
 gi|306878504|gb|EFN09724.1| tyrosyl-tRNA synthetase [Sphingobium chlorophenolicum L-1]
          Length = 405

 Score =  501 bits (1291), Expect = e-140,   Method: Composition-based stats.
 Identities = 211/414 (50%), Positives = 282/414 (68%), Gaps = 11/414 (2%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M ++ SD L +L  RG+IHQ+++   LD L ++ +V  YIG+D TA SLH GHL  +M+L
Sbjct: 1   MTSYSSDLLRLLETRGYIHQLTDAEGLDALAARQIVPGYIGFDPTAPSLHVGHLVSIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             LQK GHKPI LMGGGT  IGDPSF+DE+R+++ +  I EN+  IK +F  F+ +G G 
Sbjct: 61  RQLQKAGHKPIVLMGGGTGKIGDPSFKDEARKLLTTDLIAENVASIKRVFERFLTFGDGP 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           TDA+ML+N  WL  ++YI  LR+IG  FSVNRMLSF+SV+ RL REQSLSFLEFNYMILQ
Sbjct: 121 TDAIMLDNAEWLDRLEYIPFLRDIGQHFSVNRMLSFDSVKLRLDREQSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDF+EL++   CRLQMGGSDQWGNI+ G++L  R+   ++F LT+PLLT A GTKMGKT
Sbjct: 181 AYDFLELSRRSACRLQMGGSDQWGNIVNGVELARRVDGTQVFGLTTPLLTNADGTKMGKT 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           + GA+WLN++  S Y++WQ+WRN  DADV +  +  T LPM E++R+A LQG EINEAKK
Sbjct: 241 VGGAVWLNEDQLSNYDYWQFWRNTADADVANRLRLFTDLPMDEVERLASLQGAEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+A E T +  G E A  AA  A + F+      ++PT+S+     + G+ ++      G
Sbjct: 301 ILANEATALCRGAEAAVLAAETARKTFEEGASDANLPTVSLG----AEGLNIVQGTTALG 356

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           FA S  E RR L   AI++N  ++S+  L +K  D       KLSFG K H + 
Sbjct: 357 FAASNKEVRRKLAEGAIRVNGEVVSDPALTLKAGD-------KLSFGAKKHGLV 403


>gi|332198914|gb|EGJ12995.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae GA47901]
          Length = 418

 Score =  501 bits (1290), Expect = e-140,   Method: Composition-based stats.
 Identities = 153/419 (36%), Positives = 229/419 (54%), Gaps = 17/419 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L ERG I Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  G
Sbjct: 3   IFDELKERGLIFQTTDEEALRKALEEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKP +L+GG T +IGDPSF+D  R +     +   ++ I+G  S F+ +  G+  A+M+N
Sbjct: 63  HKPYALVGGATGLIGDPSFKDAERSLQTKDTVDGWVKSIQGQLSRFLDFENGENKAVMVN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W  SI +ID LR+IG +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF  L
Sbjct: 123 NYDWFGSISFIDFLRDIGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFFVL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            ++++  LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   AIWL
Sbjct: 181 NQDHNVTLQIGGSDQWGNMTAGTELLRRKADKTGHVITVPLITDATGKKFGKSEGNAIWL 240

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATE 305
           N E TSPY  +Q+W N+ DAD V F K  T L + EI+ + K      +E  A+K++A E
Sbjct: 241 NPEKTSPYEMYQFWMNVMDADAVRFLKIFTFLSLDEIEDIRKQFEAAPHERLAQKVLARE 300

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTL 355
           + T+VHG E  ++A     + F  +I +          + +P   +  DE +    ++ L
Sbjct: 301 VVTLVHGEEAYKEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVQADENN---NIVEL 357

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +V +G   S  +AR  +++ AI +N   I +    +   D        +  GKK + + 
Sbjct: 358 LVSSGIVNSKRQAREDVQNGAIYVNGDRIQDLDYVLSDADKLENELTVIRRGKKKYFVL 416


>gi|171778939|ref|ZP_02920001.1| hypothetical protein STRINF_00862 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171282585|gb|EDT48009.1| hypothetical protein STRINF_00862 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 418

 Score =  501 bits (1290), Expect = e-140,   Method: Composition-based stats.
 Identities = 148/420 (35%), Positives = 228/420 (54%), Gaps = 17/420 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L ERG + Q ++   L    ++G V+ Y GYD TA SLH GHL  ++    LQ  
Sbjct: 2   NIFEELKERGLVFQTTDEEALVKALTEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQMA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP +L+GG T +IGDPSF+D  R +   + +   + KI+   S F+ +  G   A+M+
Sbjct: 62  GHKPYALVGGATGLIGDPSFKDAERSLQTKETVDGWVVKIQNQLSRFLDFENGDNKAVMV 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W  +I +ID LR++G +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF E
Sbjct: 122 NNYDWFGNISFIDFLRDVGKYFTVNAMMSKESVKKRI--ETGISYTEFAYQIMQGYDFYE 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L   Y+  LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+W
Sbjct: 180 LNDKYNVTLQIGGSDQWGNMTAGTELIRRKADKTGHVMTVPLITDATGKKFGKSEGNAVW 239

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIAT 304
           L+ + TSPY  +Q+W N+ D D V F K  T L + EI  + K      +E  A+K++A 
Sbjct: 240 LDADKTSPYEMYQFWLNVMDDDAVRFLKIFTFLSLDEIAEIEKEFNAARHERLAQKVLAR 299

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLT 354
           E+ T+VHG E  ++A     + F  +I S           ++P  ++S D+      ++ 
Sbjct: 300 EVVTLVHGEEAYKEAIKITEQLFAGNIKSLSAKELKQGLNNVPNYAVSDDD---NRNIVE 356

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           ++V A  + S  +AR  +++ AI IN   + +    +   D        +  GKK + + 
Sbjct: 357 MLVAAKISPSKRQAREDVQNGAIYINGERVQDLDYTLSDDDKIDNELTVIRRGKKKYFVL 416


>gi|319651869|ref|ZP_08005993.1| tyrosyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2]
 gi|317396428|gb|EFV77142.1| tyrosyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2]
          Length = 419

 Score =  501 bits (1290), Expect = e-140,   Method: Composition-based stats.
 Identities = 150/419 (35%), Positives = 226/419 (53%), Gaps = 14/419 (3%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L  RG I+Q ++   ++    +  ++ Y G D TA S+H GHL   + L   QK G
Sbjct: 3   LLEDLQWRGIIYQQTDEEGIENTLGKEAISLYCGVDPTADSMHIGHLLPFLTLRRFQKEG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+PI L+GG T +IGDPS + E R++   + +Q N+  IK        +  G+  A+M+N
Sbjct: 63  HRPIVLVGGATGLIGDPSGKSEERKLQTLETVQHNVNCIKNQLKRIFDF-EGENGAIMVN 121

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W  S+  +  LR+ G    VN ML+ +++ SRL  E  +SF EF Y ILQA DF+ L
Sbjct: 122 NYDWAGSMDIVTFLRDYGKHVGVNYMLAKDTISSRL--ETGISFTEFTYTILQAMDFLHL 179

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERL--KTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            +N++C++Q+GGSDQWGNI  G++L  ++  +  K + LT PL+T A GTK GKT SGAI
Sbjct: 180 YENHNCKMQIGGSDQWGNITTGLELIRKMAPEGSKAYGLTIPLVTKADGTKFGKTESGAI 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIA 303
           WL+ E TSPY F+Q+W N  DADV+ + K  T L   EI+    A      + +A+K +A
Sbjct: 240 WLDSEKTSPYEFYQFWINTADADVIKYLKFFTFLSREEIEGLEKAVQDEPHLRKAQKALA 299

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI-----SISKDEVSRG--MGLLTLI 356
            E+T M+HG    E+A       F   I +     I      +   E S G  +G++ L+
Sbjct: 300 EEMTRMIHGDAALEQAIKITAALFSGEIKNLSASEIKQGFKDVPSYEHSEGGELGIVDLL 359

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           V A  + S  +AR  + + A+ +N   I+     +  +D        +  GKK + +  
Sbjct: 360 VAAKISPSKRQAREDVTNGAVSVNGERITELDYTLSDKDKIEDQFTVIRRGKKKYFLIK 418


>gi|229828792|ref|ZP_04454861.1| hypothetical protein GCWU000342_00866 [Shuttleworthia satelles DSM
           14600]
 gi|229793386|gb|EEP29500.1| hypothetical protein GCWU000342_00866 [Shuttleworthia satelles DSM
           14600]
          Length = 427

 Score =  501 bits (1290), Expect = e-140,   Method: Composition-based stats.
 Identities = 170/414 (41%), Positives = 254/414 (61%), Gaps = 10/414 (2%)

Query: 2   PAFKSD---FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLM 58
           P  + +       L  RG I Q+++   +  L + G  T YIG+D TA SLH GH   L 
Sbjct: 14  PETRRNEMTLYDELVARGLIAQLTDEERIKDLINHGRATFYIGFDPTADSLHVGHFMALT 73

Query: 59  LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT 118
           L+  LQ  G++PI+L+GGGT++IGDPS R + R MM  ++I  N E  K   S FI++G 
Sbjct: 74  LMKRLQMGGNRPIALIGGGTAMIGDPSGRTDLRSMMTVEQIDHNCECFKKQMSRFIEFGE 133

Query: 119 GKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMI 178
            K  ALM+NN  WL ++ ++D +RE+G+ FSVN ML   +  +R++R   LSFLEF+YM+
Sbjct: 134 DK--ALMVNNADWLRNLNFLDFMREVGAHFSVNDMLRARAYVNRMER--GLSFLEFSYML 189

Query: 179 LQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMG 238
           +QAYDF +L + Y C ++ GG DQW N++ G +L  +       A+T  LL    GTKMG
Sbjct: 190 MQAYDFYKLYQEYGCNMEFGGDDQWSNMLAGTELIRKKLGEDAAAMTINLLLKHDGTKMG 249

Query: 239 KTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEA 298
           KT  GA+WL+   TSPY+F+QYWRN+DDADV+ F + +T LP+ +ID M + +G ++NEA
Sbjct: 250 KTAGGAVWLDPGKTSPYDFFQYWRNVDDADVLKFLRMMTFLPLEQIDEMDRWEGAQLNEA 309

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIV 357
           K+I+A E+T MVHG EEA+KA  AA   F   + S +MP   + +++   G + +L+++V
Sbjct: 310 KRILAHELTAMVHGEEEADKAQEAAKSLFAGGVSSDNMPQAVVREEDFKEGEIDILSVLV 369

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
             G A S ++ARR ++   + +N   +++     +  DF       L  GKK +
Sbjct: 370 LCGLAQSRSDARRAVEQGGVSVNGDKVTDIHTSYRPSDFAE--EFLLRRGKKKY 421


>gi|238650336|ref|YP_002916188.1| tyrosyl-tRNA synthetase [Rickettsia peacockii str. Rustic]
 gi|259517015|sp|C4K0N9|SYY_RICPU RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|238624434|gb|ACR47140.1| tyrosyl-tRNA synthetase [Rickettsia peacockii str. Rustic]
          Length = 411

 Score =  501 bits (1290), Expect = e-139,   Method: Composition-based stats.
 Identities = 189/409 (46%), Positives = 282/409 (68%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           F+     +G+ HQ ++   L  +  +  + AYIG+D TA+SLH G L Q+M+L  LQ+ G
Sbjct: 3   FIEEFINKGYFHQCTDLDRLTAITKETKIAAYIGFDCTATSLHIGSLMQIMILRLLQQHG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKPI ++GGGTS IGDP+++DE R+++  ++I +N E IK   S FIK+G GK+DA+ML+
Sbjct: 63  HKPIVIIGGGTSKIGDPTWKDEVRKILSKEDIAKNAEGIKKSLSKFIKFGDGKSDAIMLD 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL S  Y+D LR+ GS+FSVNRML+ +SV+ RL+REQ LSFLEFNYM+LQAYDF  L
Sbjct: 123 NAEWLDSFNYLDFLRDFGSYFSVNRMLTMDSVKLRLEREQHLSFLEFNYMLLQAYDFYYL 182

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
           +K+Y+C LQ+GGSDQWGNI+ G DL  ++   ++F +T+PLLTT+SG KMGKT +GA+WL
Sbjct: 183 SKHYNCSLQLGGSDQWGNIVMGADLIRKISGKEVFGMTTPLLTTSSGAKMGKTAAGAVWL 242

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           N+++ SPY+++QYWRN +DAD+V FAK  +     E++R   L  ++IN AKK +A E+T
Sbjct: 243 NEDLLSPYDYYQYWRNCEDADIVRFAKLYSEFTQEELNRFESLAAEDINAAKKQLAYELT 302

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
            + H  + A+ A   A++ F+     +++PT+ + ++ +  G+    L  +AG ATS +E
Sbjct: 303 KLCHSEQAAKSALETAVKIFEEGQIDENLPTVVLEQEVLQAGISAYELFHEAGLATSKSE 362

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           AR+ ++ N  KIN+ ++++E + I          IKLS GKK HI+  +
Sbjct: 363 ARKLIRGNGAKINDRLVADENMIINTNFLLDKKVIKLSAGKKRHILVRV 411


>gi|225155936|ref|ZP_03724420.1| Tyrosine--tRNA ligase [Opitutaceae bacterium TAV2]
 gi|224803289|gb|EEG21528.1| Tyrosine--tRNA ligase [Opitutaceae bacterium TAV2]
          Length = 433

 Score =  501 bits (1290), Expect = e-139,   Method: Composition-based stats.
 Identities = 139/432 (32%), Positives = 221/432 (51%), Gaps = 21/432 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG +   ++   L    ++G VT YIG+D T  SLH GHL   + L   Q  
Sbjct: 2   NLIEDLQWRGLLADCTDLDALAKRLNEGPVTLYIGFDPTGDSLHVGHLMGQLTLRRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK--TDAL 124
           GH+ + L GG T +IGDPS +   R ++  +++  N+ +IK   S  + +        A 
Sbjct: 62  GHRVLPLAGGATGMIGDPSGKSAERNLLTPEQLAHNVARIKQQLSRLLDFDPAHTPNPAR 121

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           +++N  W   I ++D LR++G  FS+N ML+ +SVRSR++ +  +S+ EF+Y +LQA+DF
Sbjct: 122 LVDNADWTRGISFLDFLRDVGKHFSLNVMLAKDSVRSRMEGDTGISYTEFSYQLLQAHDF 181

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L +++ C LQ+GGSDQWGNI  G+D   R      +  T PL+T A G+K GKT  GA
Sbjct: 182 YILRRDHGCELQIGGSDQWGNITAGVDFIRRKLGVPAYGWTFPLITKADGSKFGKTEGGA 241

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKII 302
           +WL+ E TSPY F+Q++ N +DA V  + ++ T L   EI+ +           EA + +
Sbjct: 242 VWLDPEKTSPYKFYQFFVNTEDAKVCEYLRKFTFLGRPEIEELEAKHAANPGAREAHRAL 301

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVS----- 347
           A EIT  VHG+   + A  A+   F   I              +PT  + +  +      
Sbjct: 302 AREITRTVHGQAALDAALKASDILFGAEIGDTTESTFRDVVGEVPTKPLERIRLETTPDA 361

Query: 348 --RGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLS 405
              G  L  L+V AG A S  +AR+ ++   + +NN  +      +   D      + L 
Sbjct: 362 GVAGAPLTELLVHAGLAPSKGQARKDIEGGGVYLNNVRVGESARMVTPADLLFGKYLLLR 421

Query: 406 FGKKNHIICHLC 417
            GK+ + +  + 
Sbjct: 422 KGKRTYAVLDVT 433


>gi|260753802|ref|YP_003226695.1| tyrosyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis NCIMB
           11163]
 gi|258553165|gb|ACV76111.1| tyrosyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis NCIMB
           11163]
          Length = 409

 Score =  501 bits (1290), Expect = e-139,   Method: Composition-based stats.
 Identities = 211/415 (50%), Positives = 282/415 (67%), Gaps = 8/415 (1%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  F+SDFL +L  RG+IHQI++ + LD   SQ V+ AYIG+D TA+SLH G L Q+M+L
Sbjct: 1   MTQFRSDFLRLLETRGYIHQITDAKSLDEKASQSVIAAYIGFDPTAASLHVGSLLQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             LQ+ GHKPI LMGGGT  IGDPSF+DE+R+++    I+ NI  IK +F  F+ +G G+
Sbjct: 61  RRLQQAGHKPIVLMGGGTGKIGDPSFKDEARKLLDEDTIKANIASIKRVFEHFLHFGDGE 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
            DA+M++N  WL  ++YI  LR++G  FSVNRMLSF+SV+ RL REQSLSFLEFNYMILQ
Sbjct: 121 NDAVMVDNAEWLDRLEYIPFLRDVGQHFSVNRMLSFDSVKLRLDREQSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDF+EL++ +   LQ+GGSDQWGNI+ GI+L  R+   ++F LTSPL+TTA G KMGKT
Sbjct: 181 AYDFLELSRRFGVCLQLGGSDQWGNIVNGIELARRMDGKEVFGLTSPLMTTADGVKMGKT 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           + GAIWLN +M SPY++WQ+WRN  DADV  F K  T LP+ EI R+A L+G EINEAKK
Sbjct: 241 VGGAIWLNGDMCSPYDYWQFWRNTHDADVERFLKLFTDLPLDEIARLAALEGSEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+A E T + HG + AE+AA  A + F+       +P + +S       + L+  +V  G
Sbjct: 301 ILANEATKLAHGEKAAEEAAATAKKTFEEGAAGDALPVMKVS----DSSISLVDALVGLG 356

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
              S  EARR ++    +IN     +EK  I++       NI++S GKK H +  
Sbjct: 357 LVASKAEARRMIRGGGARINGEKALDEKAVIEVT----AENIRISAGKKAHGVIQ 407


>gi|148984396|ref|ZP_01817684.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae SP3-BS71]
 gi|194398136|ref|YP_002038688.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae G54]
 gi|254783641|sp|B5E3A7|SYY_STRP4 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|147923173|gb|EDK74287.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae SP3-BS71]
 gi|194357803|gb|ACF56251.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae G54]
 gi|301800846|emb|CBW33503.1| putative tyrosyl-tRNA synthetase [Streptococcus pneumoniae OXC141]
          Length = 418

 Score =  501 bits (1290), Expect = e-139,   Method: Composition-based stats.
 Identities = 152/419 (36%), Positives = 229/419 (54%), Gaps = 17/419 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L ERG I Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  G
Sbjct: 3   IFDELKERGLIFQTTDEEALRKALEEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKP +L+GG T +IGDPSF+D  R +     +   ++ I+G  S F+ +  G+  A+M+N
Sbjct: 63  HKPYALVGGATGLIGDPSFKDAERSLQTKDTVDGWVKSIQGQLSRFLDFENGENKAVMVN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W  SI +ID LR+IG +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF  L
Sbjct: 123 NYDWFGSISFIDFLRDIGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFFVL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            ++++  LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WL
Sbjct: 181 NQDHNVTLQIGGSDQWGNMTAGTELLRRKADKTGHVITVPLITDATGKKFGKSEGNAVWL 240

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATE 305
           N E TSPY  +Q+W N+ DAD V F K  T L + EI+ + K      +E  A+K++A E
Sbjct: 241 NPEKTSPYEMYQFWMNVMDADAVRFLKIFTFLSLDEIEDIRKQFEAAPHERLAQKVLARE 300

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTL 355
           + T+VHG E  ++A     + F  +I +          + +P   +  DE +    ++ L
Sbjct: 301 VVTLVHGEEAYKEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVQADENN---NIVEL 357

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +V +G   S  +AR  +++ AI +N   I +    +   D        +  GKK + + 
Sbjct: 358 LVSSGIVNSKRQAREDVQNGAIYVNGDRIQDLDYVLSDADKLENELTVIRRGKKKYFVL 416


>gi|329889566|ref|ZP_08267909.1| tyrosyl-tRNA synthetase [Brevundimonas diminuta ATCC 11568]
 gi|328844867|gb|EGF94431.1| tyrosyl-tRNA synthetase [Brevundimonas diminuta ATCC 11568]
          Length = 426

 Score =  501 bits (1290), Expect = e-139,   Method: Composition-based stats.
 Identities = 205/414 (49%), Positives = 286/414 (69%), Gaps = 1/414 (0%)

Query: 2   PAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
            AFKSDFL ++  RG+IHQI++P ELD   + GVVT YIG+D TA SLH GHL Q+MLL 
Sbjct: 12  TAFKSDFLRLMKARGYIHQITHPVELDEAAASGVVTGYIGFDATAPSLHVGHLIQIMLLR 71

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKT 121
            LQ+ GHKPI LMGGGT+ +GDPSF+D  R ++  ++I ENI  IKG+F  F+ +G G T
Sbjct: 72  RLQQAGHKPIVLMGGGTTKVGDPSFKDTQRPLLTEEKIAENIAGIKGVFEKFLTFGDGPT 131

Query: 122 DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA 181
           DA+ML+N+ WL  + Y+  LR+ G+ F++NRMLSF+SV+ RL REQ L+FLEFNYM++QA
Sbjct: 132 DAVMLDNDEWLSQLGYLQFLRDYGTHFTINRMLSFDSVKLRLDREQPLTFLEFNYMLMQA 191

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            DF+EL + Y C LQMGGSDQWGNII G++L  ++     F LT+PLL+TASG KMGKT+
Sbjct: 192 TDFLELNRRYGCSLQMGGSDQWGNIINGVELTRKVDHKAAFGLTTPLLSTASGQKMGKTV 251

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKI 301
            GA+WLN +  SP+++WQYWRN +D DV  F +  T LP+ +I+R   L+G EIN+AKK 
Sbjct: 252 GGAVWLNADALSPFDYWQYWRNTEDGDVGRFMRLFTDLPLDQIERYEALEGAEINDAKKA 311

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGF 361
           +A   T+M+HG E A+ A  AA   F+    S  +PT+ + +DEV  G  +  +  KAG 
Sbjct: 312 LADATTSMLHGVEAAQAARAAAEAAFEKGQLSADLPTVELPRDEV-IGAMIAAVTTKAGL 370

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           + S  EARR  +   +++N+ ++++    I+  D ++ G +KL  GKK  ++  
Sbjct: 371 SASNGEARRLAQGGGLRLNDEVVNDGARLIEEADLNTDGVLKLGAGKKKLVLVR 424


>gi|289167043|ref|YP_003445310.1| tyrosyl-tRNA synthetase 1 [Streptococcus mitis B6]
 gi|288906608|emb|CBJ21441.1| tyrosyl-tRNA synthetase 1 [Streptococcus mitis B6]
          Length = 418

 Score =  501 bits (1290), Expect = e-139,   Method: Composition-based stats.
 Identities = 153/419 (36%), Positives = 229/419 (54%), Gaps = 17/419 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L ERG I Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  G
Sbjct: 3   IFDELKERGLIFQTTDEEALRKALEEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKP +L+GG T +IGDPSF+D  R +     +   ++ I+G  S F+ +  G+  A+M+N
Sbjct: 63  HKPYALVGGATGLIGDPSFKDAERSLQTKDTVDGWVKSIQGQLSRFLDFENGENKAVMVN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W  SI +ID LR+IG +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF  L
Sbjct: 123 NYDWFGSISFIDFLRDIGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFFVL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            ++++  LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WL
Sbjct: 181 NQDHNVTLQIGGSDQWGNMTAGTELLRRKADKTGHVITVPLITDATGKKFGKSEGNAVWL 240

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATE 305
           N E TSPY  +Q+W N+ DAD V F K  T L + EI+ + K      +E  A+K++A E
Sbjct: 241 NPEKTSPYEMYQFWMNVMDADAVRFLKIFTFLSLDEIEDIRKQFEAAPHERLAQKVLARE 300

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTL 355
           + T+VHG E  ++A     + F  +I +          + +P   +  DE    + ++ L
Sbjct: 301 VVTLVHGEEAYKEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVQADE---NLNIVEL 357

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +V AG   S  +AR  +++ AI +N   I +    +   D        +  GKK + + 
Sbjct: 358 LVSAGVVNSKRQAREDVQNGAIYVNGDRIQDLDYVLNDADKLENELTVIRRGKKKYFVL 416


>gi|116628549|ref|YP_821168.1| tyrosyl-tRNA synthetase [Streptococcus thermophilus LMD-9]
 gi|122266856|sp|Q03IK0|SYY_STRTD RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|116101826|gb|ABJ66972.1| tyrosyl-tRNA synthetase [Streptococcus thermophilus LMD-9]
          Length = 418

 Score =  501 bits (1290), Expect = e-139,   Method: Composition-based stats.
 Identities = 151/419 (36%), Positives = 227/419 (54%), Gaps = 17/419 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG I Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  G
Sbjct: 3   IFEELKARGLIFQTTDEEALVKAFEEGPVSFYTGYDPTADSLHLGHLVAILTSRRLQLAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKP +L+GG T +IGDPSF D  R +   + ++  +EKI+G  S F+ +  G   A+M+N
Sbjct: 63  HKPYALVGGATGLIGDPSFNDAERSLQTKETVEGWVEKIQGQLSRFLDFENGDNKAVMVN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W  S+ +ID LR++G +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF EL
Sbjct: 123 NYDWFGSVSFIDFLRDVGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFYEL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
              Y   LQ+GGSDQWGN+  G +L  R        +T PL+T ++G K GK+   A+WL
Sbjct: 181 NAKYGVTLQIGGSDQWGNMTAGTELLRRKADKSGHVITVPLITDSTGKKFGKSEGNAVWL 240

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIATE 305
           +   T+PY  +Q+W N+ D D V F K  T L + EI+ + K   Q +    A+K++A E
Sbjct: 241 DATKTTPYEMYQFWLNVMDDDAVRFLKIFTFLSLEEIEEIGKEFDQARHQRLAQKVLARE 300

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTL 355
           + T+VHG+E  E+A     + F  ++ +            +PT  IS DE    + ++ L
Sbjct: 301 VVTLVHGKEAYEQAVHITEQLFAGNLKALSARDLKVALNGVPTYEISADE---NLNIVEL 357

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +V A  + S  +AR  +++ AI IN   + +    +   D        +  GKK + + 
Sbjct: 358 LVNAKISPSKRQAREDVQNGAIYINGERVQDLDYTLSDTDKIDNEITVIRRGKKKNFVL 416


>gi|319945777|ref|ZP_08020028.1| tyrosine--tRNA ligase [Streptococcus australis ATCC 700641]
 gi|319748137|gb|EFW00380.1| tyrosine--tRNA ligase [Streptococcus australis ATCC 700641]
          Length = 418

 Score =  501 bits (1290), Expect = e-139,   Method: Composition-based stats.
 Identities = 153/419 (36%), Positives = 227/419 (54%), Gaps = 17/419 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L ERG I Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  G
Sbjct: 3   IFDELKERGLIFQTTDEDALRKALEEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKP +L+GG T +IGDPSF+D  R +   + +   +  I+G  S F+ +  G+  A+M+N
Sbjct: 63  HKPYALVGGATGLIGDPSFKDAERSLQTKETVDGWVASIQGQLSRFLDFENGENKAVMVN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W  SI +ID LR+IG +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF  L
Sbjct: 123 NYDWFGSISFIDFLRDIGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFFVL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            + ++  LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WL
Sbjct: 181 NQEHNVTLQIGGSDQWGNMTAGTELMRRKADKTGHVITVPLITDATGKKFGKSEGNAVWL 240

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATE 305
           N   TSPY  +Q+W N+ DAD V F K  T L + EI+ + K      +E  A+KI+A E
Sbjct: 241 NASKTSPYEMYQFWMNVMDADAVRFLKIFTFLSLDEIEEIRKQFEAAPHERLAQKILARE 300

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTL 355
           + T+VHG E  ++A     + F  +I +          + +P   +  DE    + ++ L
Sbjct: 301 VVTLVHGEEAYKEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVQADE---NLNIVEL 357

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +V +G   S  +AR  +++ AI IN   I +    +   D        +  GKK + + 
Sbjct: 358 LVTSGVVNSKRQAREDVQNGAIYINGDRIQDLDYVLSDSDKLENELTVIRRGKKKYFVL 416


>gi|182685035|ref|YP_001836782.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae CGSP14]
 gi|303256064|ref|ZP_07342086.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae BS455]
 gi|303259601|ref|ZP_07345577.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae SP-BS293]
 gi|303262046|ref|ZP_07347991.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS292]
 gi|303264502|ref|ZP_07350421.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae BS397]
 gi|303266777|ref|ZP_07352658.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae BS457]
 gi|303269003|ref|ZP_07354786.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae BS458]
 gi|259517019|sp|B2IN18|SYY_STRPS RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|182630369|gb|ACB91317.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae CGSP14]
 gi|301802770|emb|CBW35544.1| putative tyrosyl-tRNA synthetase [Streptococcus pneumoniae INV200]
 gi|302596980|gb|EFL64104.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae BS455]
 gi|302636686|gb|EFL67176.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS292]
 gi|302639153|gb|EFL69612.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae SP-BS293]
 gi|302641470|gb|EFL71834.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae BS458]
 gi|302643685|gb|EFL73951.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae BS457]
 gi|302645872|gb|EFL76100.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae BS397]
          Length = 418

 Score =  501 bits (1290), Expect = e-139,   Method: Composition-based stats.
 Identities = 151/419 (36%), Positives = 229/419 (54%), Gaps = 17/419 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L ERG I Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  G
Sbjct: 3   IFDELKERGLIFQTTDEEALRKALEEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKP +L+GG T +IGDPSF+D  R +     +   ++ I+G  S F+ +  G+  A+M+N
Sbjct: 63  HKPYALVGGATGLIGDPSFKDAERSLQTKDTVDGWVKSIQGQLSRFLDFENGENKAVMVN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W  SI +ID LR+IG +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF  L
Sbjct: 123 NYDWFGSISFIDFLRDIGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFFVL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            ++++  LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WL
Sbjct: 181 NQDHNVTLQIGGSDQWGNMTAGTELLRRKADKTGHVITVPLITDATGKKFGKSEGNAVWL 240

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATE 305
           N E TSPY  +Q+W N+ DAD + F K  T L + EI+ + K      +E  A+K++A E
Sbjct: 241 NPEKTSPYEMYQFWMNVMDADAIRFLKIFTFLSLDEIEDIRKQFEAAPHERLAQKVLARE 300

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTL 355
           + T+VHG E  ++A     + F  +I +          + +P   +  DE +    ++ L
Sbjct: 301 VVTLVHGEEAYKEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVQADENN---NIVEL 357

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +V +G   S  +AR  +++ AI +N   I +    +   D        +  GKK + + 
Sbjct: 358 LVSSGIVNSKRQAREDVQNGAIYVNGDRIQDLDYVLSDADKLENELTVIRRGKKKYFVL 416


>gi|301795027|emb|CBW37492.1| putative tyrosyl-tRNA synthetase [Streptococcus pneumoniae INV104]
          Length = 418

 Score =  500 bits (1289), Expect = e-139,   Method: Composition-based stats.
 Identities = 152/419 (36%), Positives = 229/419 (54%), Gaps = 17/419 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L ERG I Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  G
Sbjct: 3   IFDELKERGLIFQTTDEEALRKALEEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKP +L+GG T +IGDPSF+D  R +     +   ++ I+G  S F+ +  G+  A+M+N
Sbjct: 63  HKPYALVGGATGLIGDPSFKDAERSLQTKDTVDGWVKSIQGQLSRFLDFENGENKAVMVN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W  SI +ID LR+IG +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF  L
Sbjct: 123 NYDWFGSISFIDFLRDIGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFFVL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            ++++  LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WL
Sbjct: 181 NQDHNVTLQIGGSDQWGNMTAGTELLRRKADKTGHVITVPLITDATGKKFGKSEGNAVWL 240

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATE 305
           N E TSPY  +Q+W N+ DAD V F K  T L + EI+ + K      +E  A+K++A E
Sbjct: 241 NPEKTSPYEMYQFWMNVMDADAVRFLKVFTFLSLDEIEDIRKQFEAAPHERLAQKVLARE 300

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTL 355
           + T+VHG E  ++A     + F  +I +          + +P   +  DE +    ++ L
Sbjct: 301 VVTLVHGEEAYKEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVQADENN---NIVEL 357

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +V +G   S  +AR  +++ AI +N   I +    +   D        +  GKK + + 
Sbjct: 358 LVSSGIVNSKRQAREDVQNGAIYVNGDRIQDLDYVLSDADKLENELTVIRRGKKKYFVL 416


>gi|56552539|ref|YP_163378.1| tyrosyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ZM4]
 gi|241762221|ref|ZP_04760303.1| tyrosyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ATCC
           10988]
 gi|81354696|sp|Q5NLZ3|SYY_ZYMMO RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|56544113|gb|AAV90267.1| tyrosyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ZM4]
 gi|241373268|gb|EER62887.1| tyrosyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ATCC
           10988]
          Length = 409

 Score =  500 bits (1289), Expect = e-139,   Method: Composition-based stats.
 Identities = 210/415 (50%), Positives = 282/415 (67%), Gaps = 8/415 (1%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  F+SDFL +L  RG+IHQI++ + LD   SQ V+ AYIG+D TA+SLH G L Q+M+L
Sbjct: 1   MTQFRSDFLRLLETRGYIHQITDAKSLDEKASQSVIAAYIGFDPTAASLHVGSLLQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             LQ+ GHKPI LMGGGT  IGDPSF+DE+R+++    I+ NI  IK +F  F+ +G G+
Sbjct: 61  RRLQQAGHKPIVLMGGGTGKIGDPSFKDEARKLLDEDTIKANIASIKRVFEHFLHFGDGE 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
            DA+M++N  WL  ++YI  LR++G  FSVNRMLSF+SV+ RL REQSLSFLEFNYMILQ
Sbjct: 121 NDAVMVDNAEWLDRLEYIPFLRDVGQHFSVNRMLSFDSVKLRLDREQSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDF+EL++ +   LQ+GGSDQWGNI+ GI+L  R+   ++F LTSPL+TTA G KMGKT
Sbjct: 181 AYDFLELSRRFGVCLQLGGSDQWGNIVNGIELARRMDGKEVFGLTSPLMTTADGVKMGKT 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           + GA+WLN +M SPY++WQ+WRN  DADV  F K  T LP+ EI R+A L+G EINEAKK
Sbjct: 241 VGGAVWLNGDMCSPYDYWQFWRNTHDADVERFLKLFTDLPLDEIARLAALEGSEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+A E T + HG + AE+AA  A + F+       +P + +S       + L+  +V  G
Sbjct: 301 ILANEATKLAHGEKAAEEAAATAKKTFEEGAAGDALPVMKVS----DSSISLVDALVGLG 356

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
              S  EARR ++    +IN     +EK  I++       NI++S GKK H +  
Sbjct: 357 LVASKAEARRMIRGGGARINGEKALDEKAVIEVT----AENIRISAGKKAHGVIQ 407


>gi|157828692|ref|YP_001494934.1| tyrosyl-tRNA synthetase [Rickettsia rickettsii str. 'Sheila Smith']
 gi|165933412|ref|YP_001650201.1| tyrosyl-tRNA synthetase [Rickettsia rickettsii str. Iowa]
 gi|189029765|sp|B0BY69|SYY_RICRO RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|189029766|sp|A8GSQ1|SYY_RICRS RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|157801173|gb|ABV76426.1| tyrosyl-tRNA synthetase [Rickettsia rickettsii str. 'Sheila Smith']
 gi|165908499|gb|ABY72795.1| tyrosyl-tRNA synthetase [Rickettsia rickettsii str. Iowa]
          Length = 411

 Score =  500 bits (1289), Expect = e-139,   Method: Composition-based stats.
 Identities = 189/409 (46%), Positives = 282/409 (68%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           F+     +G+ HQ ++   L  +  +  + AYIG+D TA+SLH G L Q+M+L  LQ+ G
Sbjct: 3   FIEEFINKGYFHQCTDLDRLTAITKETKIAAYIGFDCTATSLHIGSLMQIMILRLLQQHG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKPI ++GGGTS IGDP+++DE R+++  ++I +N E IK   S FIK+G GK+DA+ML+
Sbjct: 63  HKPIVIIGGGTSKIGDPTWKDEVRKILSKEDIAKNAEGIKKSLSKFIKFGDGKSDAIMLD 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL S  Y+D LR+ GS+FSVNRML+ +SV+ RL+REQ LSFLEFNYM+LQAYDF  L
Sbjct: 123 NAEWLDSFNYLDFLRDFGSYFSVNRMLTMDSVKLRLEREQHLSFLEFNYMLLQAYDFYYL 182

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
           +K+Y+C LQ+GGSDQWGNI+ G DL  ++   ++F +T+PLLTT+SG KMGKT +GA+WL
Sbjct: 183 SKHYNCSLQLGGSDQWGNIVMGADLIRKISGKEVFGMTTPLLTTSSGAKMGKTAAGAVWL 242

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           N+++ SPY+++QYWRN +DAD+V FAK  +     E++R   L  ++IN AKK +A E+T
Sbjct: 243 NEDLLSPYDYYQYWRNCEDADIVRFAKLYSEFTQEELNRFESLAAEDINAAKKQLAYELT 302

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
            + H  + A+ A   A++ F+     +++PT+ + ++ +  G+    L  +AG ATS +E
Sbjct: 303 KLCHSEQAAKSALETAVKIFEEGQIDENLPTVVLEQEVLQAGISAYELFYEAGLATSKSE 362

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           AR+ ++ N  KIN+ ++++E + I          IKLS GKK HI+  +
Sbjct: 363 ARKLIRGNGAKINDRLVADENMIINTNFLLDKKVIKLSAGKKRHILVRV 411


>gi|163739624|ref|ZP_02147033.1| 50S ribosomal protein L32 [Phaeobacter gallaeciensis BS107]
 gi|161387083|gb|EDQ11443.1| 50S ribosomal protein L32 [Phaeobacter gallaeciensis BS107]
          Length = 418

 Score =  500 bits (1289), Expect = e-139,   Method: Composition-based stats.
 Identities = 211/415 (50%), Positives = 284/415 (68%), Gaps = 3/415 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KSDF++++ ERG++   ++ + LD        +AYIG+D TA+SLH G L Q+M+L W Q
Sbjct: 6   KSDFIAVMMERGYLSDCTDYQGLDEALMTPGQSAYIGFDATATSLHVGSLIQIMMLRWFQ 65

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA- 123
           KTGHKPI+LMGGGT+ +GDPSFR + R ++   +I +NI  IK +F ++I Y +G  +A 
Sbjct: 66  KTGHKPITLMGGGTTKVGDPSFRADERPLLTDAQIDDNIAGIKKVFDAYIDYDSGAGNAA 125

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           +MLNN  WL  + Y+  LR+IG  FSVNRMLSFESV+SRL REQSLSFLEFNYMILQAYD
Sbjct: 126 MMLNNAEWLDDLNYLTFLRDIGRHFSVNRMLSFESVKSRLDREQSLSFLEFNYMILQAYD 185

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+EL + Y C LQMGGSDQWGNI+ GIDL  R+   +++ LTSPLLTT+ G KMGK+ +G
Sbjct: 186 FLELNRRYGCVLQMGGSDQWGNIVNGIDLTRRVLDHEIYGLTSPLLTTSDGKKMGKSQNG 245

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIA 303
           AIWLN ++ SPY FWQ+WRN  DADV  F K  T LP+ E +R+  L+G E+N AK I+A
Sbjct: 246 AIWLNGDLLSPYEFWQFWRNTTDADVGRFLKLYTELPVDECNRLGALEGSEVNAAKVILA 305

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
            E+TT++HG E A  A   A E F+       +PT+++S  +V  G+ ++ LIVK+G A 
Sbjct: 306 NEVTTLLHGAEAAAAAEATAREVFEKGGIGDDLPTLALSAADVGDGISIVQLIVKSGLAK 365

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLCG 418
           S  +A+R +  N  KI++  +++  L I      S   IKLS GKK H +  L G
Sbjct: 366 SGKDAKRLIAENGAKIDDQPLTDAGLMIDTAALASP--IKLSAGKKRHALVQLDG 418


>gi|270291799|ref|ZP_06198015.1| tyrosine--tRNA ligase [Streptococcus sp. M143]
 gi|270279884|gb|EFA25725.1| tyrosine--tRNA ligase [Streptococcus sp. M143]
          Length = 418

 Score =  500 bits (1289), Expect = e-139,   Method: Composition-based stats.
 Identities = 151/419 (36%), Positives = 229/419 (54%), Gaps = 17/419 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L ERG I Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  G
Sbjct: 3   IFDELKERGLIFQTTDEEALRKALEEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKP +L+GG T +IGDPSF+D  R +     +   ++ I+G  S F+ +  G+  A+M+N
Sbjct: 63  HKPYALVGGATGLIGDPSFKDAERSLQTKDTVDGWVKSIQGQLSRFLDFENGENKAVMVN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W  SI +ID LR++G +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF  L
Sbjct: 123 NYDWFGSISFIDFLRDVGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFFVL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            ++++  LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WL
Sbjct: 181 NQDHNVTLQIGGSDQWGNMTAGTELLRRKADKTGHVITVPLITDATGKKFGKSEGNAVWL 240

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATE 305
           N E TSPY  +Q+W N+ DAD V F K  T L + EI+ + K      +E  A+K++A E
Sbjct: 241 NPEKTSPYEMYQFWMNVMDADAVRFLKIFTFLSLDEIEDIRKQFEAAPHERLAQKVLARE 300

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTL 355
           + T+VHG E  ++A     + F  +I +          + +P   +  DE      ++ L
Sbjct: 301 VVTLVHGEEAYKEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVQADE---NHNIVEL 357

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +V +G   S  +AR  +++ AI +N + I +    +   D        +  GKK + + 
Sbjct: 358 LVSSGVVNSKRQAREDVQNGAIYVNGNRIQDLDYVLSDADKLDNELTVIRRGKKKYFVL 416


>gi|82543995|ref|YP_407942.1| tyrosyl-tRNA synthetase [Shigella boydii Sb227]
 gi|97201953|sp|Q320Z4|SYY_SHIBS RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|81245406|gb|ABB66114.1| tyrosine tRNA synthetase [Shigella boydii Sb227]
          Length = 424

 Score =  500 bits (1289), Expect = e-139,   Method: Composition-based stats.
 Identities = 153/419 (36%), Positives = 232/419 (55%), Gaps = 11/419 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 4   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +QE ++KI+   + F+ +  G+  A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDCGENSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDF 184
            NN  W  ++  +  LR+IG  FSVN+M++ E+V+ RL RE + +S  EF+Y + Q YD+
Sbjct: 124 ANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNREDEGMSITEFSYNLQQGYDW 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L  +Y   LQ+GGSDQ  NI   IDL  RL    +  LT PL+T A GTK GKT  GA
Sbjct: 184 TCLNTHYYVELQIGGSDQRWNITSEIDLTRRLHQNHVLGLTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI   +   K  GK    A+ +
Sbjct: 244 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINALEEEDKNSGKAPR-AQYV 302

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTL 355
           +A ++T +VHG E  + A       F  S+ +      + +    +   E+ +G  L+  
Sbjct: 303 LAEQVTRLVHGEEGLQAAKRITECLFSGSLSALSEADFEQLAQDGVPMVEMEKGADLMQA 362

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +V +    S  +AR+ + SNAI IN    S+ +   K +D        L  GKKN+ + 
Sbjct: 363 LVDSELQPSRGQARKTIASNAITINGEKQSDPEYFFKEEDRLFGRFTLLRRGKKNYCLI 421


>gi|163741390|ref|ZP_02148781.1| tyrosyl-tRNA synthetase [Phaeobacter gallaeciensis 2.10]
 gi|161385124|gb|EDQ09502.1| tyrosyl-tRNA synthetase [Phaeobacter gallaeciensis 2.10]
          Length = 418

 Score =  500 bits (1289), Expect = e-139,   Method: Composition-based stats.
 Identities = 211/415 (50%), Positives = 284/415 (68%), Gaps = 3/415 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KSDF++++ ERG++   ++ + LD        +AYIG+D TA+SLH G L Q+M+L W Q
Sbjct: 6   KSDFIAVMMERGYLSDCTDYQGLDEALMTPGQSAYIGFDATATSLHVGSLIQIMMLRWFQ 65

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA- 123
           KTGHKPI+LMGGGT+ +GDPSFR + R ++   +I +NI  IK +F ++I Y +G  +A 
Sbjct: 66  KTGHKPITLMGGGTTKVGDPSFRADERPLLTDAQIDDNIAGIKKVFDAYIDYDSGAGNAA 125

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           +MLNN  WL  + Y+  LR+IG  FSVNRMLSFESV+SRL REQSLSFLEFNYMILQAYD
Sbjct: 126 MMLNNAEWLDDLNYLTFLRDIGRHFSVNRMLSFESVKSRLDREQSLSFLEFNYMILQAYD 185

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+EL + Y C LQMGGSDQWGNI+ GIDL  R+   +++ LTSPLLTT+ G KMGK+ +G
Sbjct: 186 FLELNRRYGCVLQMGGSDQWGNIVNGIDLTRRVLDHEIYGLTSPLLTTSDGKKMGKSQNG 245

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIA 303
           AIWLN ++ SPY FWQ+WRN  DADV  F K  T LP+ E +R+  L+G E+N AK I+A
Sbjct: 246 AIWLNGDLLSPYEFWQFWRNTTDADVGRFLKLYTELPVDECNRLGALEGSEVNAAKVILA 305

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
            E+TT++HG E A  A   A E F+       +PT+++S  +V  G+ ++ LIVK+G A 
Sbjct: 306 NEVTTLLHGAEAAAAAEATAREVFEKGGIGDDLPTLALSAADVGDGISIVQLIVKSGLAK 365

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLCG 418
           S  +A+R +  N  KI++  +++  L I      S   IKLS GKK H +  L G
Sbjct: 366 SGKDAKRLIAENGAKIDDKPLTDAGLMIDAAALASP--IKLSAGKKRHALVQLEG 418


>gi|149023797|ref|ZP_01836258.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae SP23-BS72]
 gi|168491625|ref|ZP_02715768.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae CDC0288-04]
 gi|168577131|ref|ZP_02722951.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae MLV-016]
 gi|169834443|ref|YP_001695461.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae Hungary19A-6]
 gi|225861916|ref|YP_002743425.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae Taiwan19F-14]
 gi|298229999|ref|ZP_06963680.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae str. Canada
           MDR_19F]
 gi|298254073|ref|ZP_06977659.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae str. Canada
           MDR_19A]
 gi|298501598|ref|YP_003723538.1| tyrosine--tRNA ligase [Streptococcus pneumoniae TCH8431/19A]
 gi|307128359|ref|YP_003880390.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae 670-6B]
 gi|254783643|sp|B1I9G6|SYY_STRPI RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|254783649|sp|C1CU03|SYY_STRZT RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|147929593|gb|EDK80586.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae SP23-BS72]
 gi|168996945|gb|ACA37557.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae Hungary19A-6]
 gi|183574103|gb|EDT94631.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae CDC0288-04]
 gi|183577264|gb|EDT97792.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae MLV-016]
 gi|225726447|gb|ACO22298.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae Taiwan19F-14]
 gi|298237193|gb|ADI68324.1| tyrosine--tRNA ligase [Streptococcus pneumoniae TCH8431/19A]
 gi|306485421|gb|ADM92290.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae 670-6B]
 gi|332198522|gb|EGJ12605.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae GA41317]
          Length = 418

 Score =  500 bits (1289), Expect = e-139,   Method: Composition-based stats.
 Identities = 152/419 (36%), Positives = 229/419 (54%), Gaps = 17/419 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L ERG I Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  G
Sbjct: 3   IFDELKERGLIFQTTDEEALRKALEEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKP +L+GG T +IGDPSF+D  R +     +   ++ I+G  S F+ +  G+  A+M+N
Sbjct: 63  HKPYALVGGATGLIGDPSFKDAERSLQTKDTVDGWVKSIQGQLSRFLDFENGENKAVMVN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W  SI +ID LR+IG +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF  L
Sbjct: 123 NYDWFGSISFIDFLRDIGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFFVL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            ++++  LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WL
Sbjct: 181 NQDHNVTLQIGGSDQWGNMTAGTELLRRKADKTGHVITVPLITDATGKKFGKSEGNAVWL 240

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATE 305
           N E TSPY  +Q+W N+ DAD V F K  T L + EI+ + K      +E  A+K++A E
Sbjct: 241 NPEKTSPYEMYQFWMNVMDADAVRFLKIFTFLSLDEIEDIRKQFEAAPHERLAQKVLARE 300

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTL 355
           + T+VHG E  ++A     + F  +I +          + +P   +  DE +    ++ L
Sbjct: 301 VVTLVHGEEAYKEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVQADEHN---NIVEL 357

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +V +G   S  +AR  +++ AI +N   I +    +   D        +  GKK + + 
Sbjct: 358 LVSSGIVNSKRQAREDVQNGAIYVNGDRIQDLDYVLSDADKLENELTVIRRGKKKYFVL 416


>gi|291545953|emb|CBL19061.1| tyrosyl-tRNA synthetase [Ruminococcus sp. SR1/5]
          Length = 408

 Score =  500 bits (1289), Expect = e-139,   Method: Composition-based stats.
 Identities = 174/398 (43%), Positives = 251/398 (63%), Gaps = 7/398 (1%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG I Q+++  E+  + + G  T YIG+D TA SLH GH   L L+  LQ  G
Sbjct: 3   VWEELKARGLIAQVTDEDEIKEMVNNGKATFYIGFDPTADSLHVGHFMALCLMKRLQMAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           ++PI+L+GGGT +IGDPS R + R+M+  + IQ NI+  K   S FI +  GK  ALM+N
Sbjct: 63  NRPIALLGGGTGMIGDPSGRTDMRQMLTKETIQHNIDCFKQQMSRFIDFSDGK--ALMVN 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL ++ Y++LLRE+G+ FSVNRML+ E  + R++R   LSFLEFNYMI+Q+YDF  L
Sbjct: 121 NADWLMNLNYVELLREVGAHFSVNRMLTAECYKQRMER--GLSFLEFNYMIMQSYDFYML 178

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            + Y C +Q GG DQW N++ G +L  R      +A+T  LL  + G KMGKT SGA+WL
Sbjct: 179 YQKYGCNMQFGGDDQWSNMLGGTELIRRKLGKDAYAMTITLLLNSEGKKMGKTQSGAVWL 238

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           +   TSP++F+QYWRN+DDADV+   + LT LP+ EID MAK +G E+N+AK+I+A ++T
Sbjct: 239 DPNKTSPFDFYQYWRNVDDADVIKCMRLLTFLPLEEIDEMAKWEGSELNKAKEILAYQLT 298

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG--MGLLTLIVKAGFATST 365
            +VHG EEA+KA   A   F     + HMPT  +S+++      + L+TL+VKA    S 
Sbjct: 299 ELVHGEEEAKKAQEGARALFS-GADTSHMPTTELSEEDFDEEGKIDLITLLVKAELVPSR 357

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
           +E RR ++   + I+   +++    ++   F   G + 
Sbjct: 358 SEGRRAIQQGGVSIDGEKLTDIYHTVEKDAFAGDGIVL 395


>gi|322388579|ref|ZP_08062179.1| tyrosine--tRNA ligase [Streptococcus infantis ATCC 700779]
 gi|321140499|gb|EFX36004.1| tyrosine--tRNA ligase [Streptococcus infantis ATCC 700779]
          Length = 418

 Score =  500 bits (1288), Expect = e-139,   Method: Composition-based stats.
 Identities = 152/419 (36%), Positives = 228/419 (54%), Gaps = 17/419 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L ERG I Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  G
Sbjct: 3   IFDELKERGLIFQTTDEEALRKALEEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKP +L+GG T +IGDPSF+D  R +     +   ++ I+G  S F+ +  G+  A+M+N
Sbjct: 63  HKPYALVGGATGLIGDPSFKDAERSLQTKDTVDGWVKSIQGQLSRFLDFENGENKAVMVN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W  SI +ID LR+IG +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF  L
Sbjct: 123 NYDWFGSISFIDFLRDIGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFFVL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            ++++  LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WL
Sbjct: 181 NQDHNVTLQIGGSDQWGNMTAGTELMRRKADKTGHVITVPLITDATGKKFGKSEGNAVWL 240

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATE 305
           N E TSPY  +Q+W N+ DAD V F K  T L + EI+ + K      +E  A+K++A E
Sbjct: 241 NPEKTSPYEMYQFWMNVMDADAVRFLKIFTFLSLDEIEDIRKQFEAAPHERLAQKVLARE 300

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTL 355
           + T+VHG E  ++A     + F  +I +          + +P   +  DE      ++ L
Sbjct: 301 VVTLVHGEEAYKEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVQADE---NHNIVEL 357

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +V +G   S  +AR  +++ AI +N   I +    +   D        +  GKK + + 
Sbjct: 358 LVSSGVVNSKRQAREDVQNGAIYVNGDRIQDLDYVLSDTDKLENELTVIRRGKKKYFVL 416


>gi|157964687|ref|YP_001499511.1| tyrosyl-tRNA synthetase [Rickettsia massiliae MTU5]
 gi|189029764|sp|A8F228|SYY_RICM5 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|157844463|gb|ABV84964.1| Tyrosyl-tRNA synthetase [Rickettsia massiliae MTU5]
          Length = 411

 Score =  500 bits (1288), Expect = e-139,   Method: Composition-based stats.
 Identities = 189/409 (46%), Positives = 281/409 (68%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           F+     +G+ HQ ++   L  +  +  + AYIG+D TA+SLH G L Q+M+L  LQ+ G
Sbjct: 3   FIEEFINKGYFHQCTDLDRLTAITKETKIAAYIGFDCTATSLHIGSLMQIMILRLLQQHG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKPI ++GGGTS IGDP+++DE R+++  ++I +N E IK   S FIK+G GK+DA+ML+
Sbjct: 63  HKPIVIIGGGTSKIGDPTWKDEVRKILSKEDIAKNAEGIKKSLSKFIKFGDGKSDAIMLD 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL S  Y+D LR+ GS+FSVNRML+ +SV+ RL+REQ LSFLEFNYM+LQAYDF  L
Sbjct: 123 NAEWLDSFNYLDFLRDFGSYFSVNRMLTMDSVKLRLEREQHLSFLEFNYMLLQAYDFYYL 182

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
           +K+Y+C LQ+GGSDQWGNI+ G DL  ++   ++F +T+PLLTT+SG KMGKT +GA+WL
Sbjct: 183 SKHYNCSLQLGGSDQWGNIVMGADLIRKISGKEVFGMTTPLLTTSSGAKMGKTAAGAVWL 242

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           N+++ SPY+++QYWRN +DAD+V FAK  +     E++R   L  ++IN AKK +A E+T
Sbjct: 243 NEDLLSPYDYYQYWRNCEDADIVRFAKLYSEFTQEELNRFEILAAEDINAAKKQLAYELT 302

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
            + H  + A+ A   A++ F+     +++PT+ + ++ +  G+    L  +AG ATS +E
Sbjct: 303 KLCHSEQAAKSALETAVKIFEEGQIDENLPTVVLEQEVLQAGISAYELFHEAGLATSKSE 362

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           AR+ ++ N  KIN+ ++ +E + I          IKLS GKK HI+  +
Sbjct: 363 ARKLIRGNGAKINDRLVEDENMIINTNFLLDKNVIKLSAGKKRHILVRV 411


>gi|325689600|gb|EGD31605.1| tyrosine--tRNA ligase [Streptococcus sanguinis SK115]
          Length = 419

 Score =  500 bits (1288), Expect = e-139,   Method: Composition-based stats.
 Identities = 146/416 (35%), Positives = 227/416 (54%), Gaps = 11/416 (2%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L ERG + Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  G
Sbjct: 4   IFDELKERGLVFQTTDEAALRKALEEGQVSYYSGYDPTADSLHLGHLVAILTSRRLQLAG 63

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKP +L+GG T +IGDPSFRD  R +   + ++  ++ I+   S F+ +  G   A M+N
Sbjct: 64  HKPYALVGGATGLIGDPSFRDAERSLQTKETVEGWVKSIQDQLSRFLDFEKGDNKAEMVN 123

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W  SI +ID LR++G +F+VN M+S +SV+SR+  E  +S+ EF Y I+Q YDF  L
Sbjct: 124 NYDWFSSISFIDFLRDVGKYFTVNYMMSKDSVKSRI--ETGISYTEFAYQIMQGYDFYIL 181

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            +N+   LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WL
Sbjct: 182 NQNHGVTLQIGGSDQWGNMTAGTELLRRKADKTGHVITVPLITDATGKKFGKSEGNAVWL 241

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATE 305
           N + TSPY  +Q+W N+ DAD + F K  T L + EI+ + +      +E  A+K++A E
Sbjct: 242 NPDKTSPYEMYQFWMNVMDADAIRFLKIFTFLSLDEIEEIRQQFEAAPHERLAQKVLARE 301

Query: 306 ITTMVHGREEAEKAATAAMECFDMSI-------HSQHMPTISISKDEVSRGMGLLTLIVK 358
           + ++VHG+E  ++A     + F  +I         Q +  +   + +    + ++ L+V 
Sbjct: 302 VVSLVHGQEAYQEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVQAEDSLNIVELLVT 361

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           AG   S  +AR  +++ AI +N   I +    +   D        +  GKK + + 
Sbjct: 362 AGVVNSKRQAREDVQNGAIYLNGERIQDLDYVLSASDKLEDELTVIRRGKKKYFVL 417


>gi|323353636|ref|ZP_08088169.1| tyrosine--tRNA ligase [Streptococcus sanguinis VMC66]
 gi|322121582|gb|EFX93345.1| tyrosine--tRNA ligase [Streptococcus sanguinis VMC66]
 gi|324992322|gb|EGC24244.1| tyrosine--tRNA ligase [Streptococcus sanguinis SK405]
          Length = 419

 Score =  500 bits (1288), Expect = e-139,   Method: Composition-based stats.
 Identities = 145/416 (34%), Positives = 227/416 (54%), Gaps = 11/416 (2%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L ERG + Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  G
Sbjct: 4   IFDELKERGLVFQTTDEAALRKALEEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAG 63

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKP +L+GG T +IGDPSF+D  R +   + ++  ++ I+   S F+ +  G   A M+N
Sbjct: 64  HKPYALVGGATGLIGDPSFKDAERSLQTKETVEGWVKSIQDQLSRFLDFEKGDNKAEMVN 123

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W  SI +ID LR++G +F+VN M+S +SV+SR+  E  +S+ EF Y I+Q YDF  L
Sbjct: 124 NYDWFSSISFIDFLRDVGKYFTVNYMMSKDSVKSRI--ETGISYTEFAYQIMQGYDFYTL 181

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            +N+   LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WL
Sbjct: 182 NQNHGVTLQIGGSDQWGNMTAGTELLRRKADKTGHVITVPLITDATGKKFGKSEGNAVWL 241

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATE 305
           N + TSPY  +Q+W N+ DAD + F K  T L + EI+ + +      +E  A+K++A E
Sbjct: 242 NPDKTSPYEMYQFWMNVMDADAIRFLKIFTFLSLDEIEEIRQQFESAPHERLAQKVLARE 301

Query: 306 ITTMVHGREEAEKAATAAMECFDMSI-------HSQHMPTISISKDEVSRGMGLLTLIVK 358
           + ++VHG+E  ++A     + F  +I         Q +  +   + +    + ++ L+V 
Sbjct: 302 VVSLVHGQEAYQEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVQAEDNLNIVELLVT 361

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           AG   S  +AR  +++ AI +N   I +    +   D        +  GKK + + 
Sbjct: 362 AGVVNSKRQAREDVQNGAIYLNGERIQDLDYVLSDSDKLEDELTVIRRGKKKYFVL 417


>gi|296269994|ref|YP_003652626.1| tyrosyl-tRNA synthetase [Thermobispora bispora DSM 43833]
 gi|296092781|gb|ADG88733.1| tyrosyl-tRNA synthetase [Thermobispora bispora DSM 43833]
          Length = 421

 Score =  500 bits (1288), Expect = e-139,   Method: Composition-based stats.
 Identities = 154/420 (36%), Positives = 230/420 (54%), Gaps = 10/420 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +D L  L  R  + Q ++   L    ++G ++ Y G+D TA SLH G+L  L++L   Q+
Sbjct: 2   TDILDELHWRDIVAQTTDANALRKALAEGPISVYAGFDPTAPSLHVGNLATLLILTRFQR 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+PI L+GG T +IGDPS R   R +   + + E + +I+     F+ +  G   AL+
Sbjct: 62  AGHRPIGLVGGATGLIGDPSGRSTERALNPVEVVAEWVTRIRAQVEKFLSFDEGPNSALL 121

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           ++N  W   +  ID LR+IG  F VNRML+ ESV +RL+  + LS+ EF+Y ILQA D++
Sbjct: 122 VSNLEWTEKLSVIDFLRDIGKHFPVNRMLARESVAARLE-GEGLSYTEFSYQILQANDYL 180

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           EL + Y C LQ+GGSDQWGNI  G+DL  R++   +  LT  L+T A GTK GKT  GAI
Sbjct: 181 ELYRRYGCTLQVGGSDQWGNITAGVDLIRRVEGAHVHGLTGKLITKADGTKFGKTAGGAI 240

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIA 303
           WL+  +TSPY F+Q+W N DD DVV   K  T     EI+ + K   +     EA++ +A
Sbjct: 241 WLDPALTSPYAFYQFWLNADDRDVVRLLKVFTFRTREEIEELEKAVAERPAAREAQRALA 300

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQ-HMPTISISKDEVSR------GMGLLTLI 356
            ++T +VHGREE E+   A+   F      +    T+  + +EV +      G   + L+
Sbjct: 301 EDVTALVHGREELERVVAASRALFGHGTLQELDERTLEAALNEVPKAKVPALGAPYVDLL 360

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             +G   S + ARR ++     +NN  +++E       D      + L  GKK      +
Sbjct: 361 AASGIVESKSAARRAVREGGAYLNNVKVTDEDYVPTADDLLHGRFLVLRRGKKTIGGVEV 420


>gi|283795463|ref|ZP_06344616.1| tyrosine--tRNA ligase [Clostridium sp. M62/1]
 gi|291077125|gb|EFE14489.1| tyrosine--tRNA ligase [Clostridium sp. M62/1]
 gi|295114815|emb|CBL35662.1| tyrosyl-tRNA synthetase [butyrate-producing bacterium SM4/1]
          Length = 407

 Score =  500 bits (1288), Expect = e-139,   Method: Composition-based stats.
 Identities = 174/410 (42%), Positives = 251/410 (61%), Gaps = 7/410 (1%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG I Q++N  E+  + ++G  T YIG+D TA SLH GH   L L+  LQ  G
Sbjct: 3   IYEELVARGLIAQVTNEEEIKNMVNEGKATFYIGFDPTADSLHVGHFMALCLMKRLQMAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           +KPI+L+GGGT  IGDPS R + R MM  + IQ N +  K   S FI +  GK  ALM+N
Sbjct: 63  NKPIALIGGGTGYIGDPSGRTDMRSMMTPEIIQHNCDCFKKQMSRFIDFSDGK--ALMVN 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  + Y++LLRE+G  FSVNRML+ E  + R++R   LSFLEFNYMI+Q+YDF  L
Sbjct: 121 NADWLLGLNYVELLREVGPHFSVNRMLTAECYKQRMER--GLSFLEFNYMIMQSYDFYML 178

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            + Y C +Q GG DQW N++ G +L  R       A+T  LL  + G KMGKT SGA+WL
Sbjct: 179 FQKYGCNMQFGGDDQWSNMLGGTELIRRKLGKDAHAMTITLLLNSEGKKMGKTQSGAVWL 238

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           +   TSP+ F+QYWRN+ DADV+   + LT LP+ +ID M + +G ++N+AK+I+A E+T
Sbjct: 239 DPNKTSPFEFYQYWRNVADADVLKCLRMLTFLPLEQIDEMDQWEGSQLNKAKEILAYELT 298

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTN 366
            +VHG EEA KA  A+   F    ++ +MPT  + +++ + G + +L+++ K+G A S +
Sbjct: 299 ALVHGEEEAVKAQEASRALFTSG-NAANMPTAKLKEEDFADGSIDILSILQKSGLAPSRS 357

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           EARR+++   + ++   + + K           G + +  GKKN     L
Sbjct: 358 EARRNVEQGGVSVDGVQVKDIKAAFTKDQLSGEG-VVVKRGKKNFKRVVL 406


>gi|126728742|ref|ZP_01744557.1| tyrosyl-tRNA synthetase [Sagittula stellata E-37]
 gi|126710672|gb|EBA09723.1| tyrosyl-tRNA synthetase [Sagittula stellata E-37]
          Length = 429

 Score =  500 bits (1288), Expect = e-139,   Method: Composition-based stats.
 Identities = 213/425 (50%), Positives = 282/425 (66%), Gaps = 14/425 (3%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KSDF+ ++ ERG++   ++ + LD   S GVVTAYIGYD TA SLH GHL  +M+L WLQ
Sbjct: 6   KSDFMRVMMERGYLADCTDYQALDDKLSHGVVTAYIGYDATAQSLHVGHLLNIMMLRWLQ 65

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT------ 118
           KTGH+PI+LMGGGT+ +GDPSFR + R ++  ++I  NI  +K +F+ ++ YG       
Sbjct: 66  KTGHRPITLMGGGTTKVGDPSFRSDERPLLGPEQIDANIAGMKQVFAKYLSYGDAPTMPS 125

Query: 119 ------GKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFL 172
                     ALMLNN  WL  + Y+D LR+IG  FSVNRMLSFESV+SRL REQSLSFL
Sbjct: 126 SSEAVGPDNVALMLNNAEWLDDLNYLDFLRDIGRHFSVNRMLSFESVKSRLDREQSLSFL 185

Query: 173 EFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTA 232
           EFNYMILQAYDF+EL + Y C LQMGGSDQWGNI+ GIDL  R+   +++ LTSPLLTT+
Sbjct: 186 EFNYMILQAYDFLELNRRYGCLLQMGGSDQWGNIVNGIDLTRRVLDHEIYGLTSPLLTTS 245

Query: 233 SGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG 292
            G KMGK+  GA+WLN +M SPY FWQ+WRN  DADV  F K  T LP+ E  R+  L G
Sbjct: 246 DGKKMGKSQGGAMWLNADMLSPYEFWQFWRNTTDADVGRFLKLYTELPLEECARLGALAG 305

Query: 293 KEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGL 352
            EINEAK ++A E+TT+ HG E A  A   A E F+       +PT+ ++ +EV  G+ +
Sbjct: 306 SEINEAKIVLANEVTTLCHGSEAAAAAEATAREVFEKGGVGDDLPTLELTSEEVGDGISV 365

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           + LIV++G   S  EA+R +  N  +++++ +++  L +      S   IKLS GKK H 
Sbjct: 366 IQLIVRSGLVKSGKEAKRLIAENGARLDDAPLTDAGLMLDRGALASP--IKLSAGKKRHA 423

Query: 413 ICHLC 417
           +  L 
Sbjct: 424 LIKLS 428


>gi|289550516|ref|YP_003471420.1| Tyrosyl-tRNA synthetase, cluster 1 [Staphylococcus lugdunensis
           HKU09-01]
 gi|315658007|ref|ZP_07910881.1| tyrosine--tRNA ligase [Staphylococcus lugdunensis M23590]
 gi|289180048|gb|ADC87293.1| Tyrosyl-tRNA synthetase, cluster 1 [Staphylococcus lugdunensis
           HKU09-01]
 gi|315497043|gb|EFU85364.1| tyrosine--tRNA ligase [Staphylococcus lugdunensis M23590]
          Length = 420

 Score =  500 bits (1288), Expect = e-139,   Method: Composition-based stats.
 Identities = 145/421 (34%), Positives = 232/421 (55%), Gaps = 20/421 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L  RG I+Q ++   ++ L ++  V+ Y G D TA SLH GHL   + L   Q+ G
Sbjct: 5   LLEDLKWRGLIYQQTDEEGIEELLNKEQVSLYCGADPTADSLHIGHLLPFLTLRRFQQHG 64

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+PI L+GGGT +IGDPS + E R +   +++++N++ I        ++GT K  A+++N
Sbjct: 65  HRPIVLIGGGTGMIGDPSGKSEERVLQTEEQVEDNVQGINAQMHKLFEFGTEKG-AVLVN 123

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N+ WL  I  I  LR+ G    VN ML+ +S++SRL  E  +S+ EF Y ILQA DF  L
Sbjct: 124 NKDWLGQISLISFLRDYGKHVGVNYMLAKDSIQSRL--ENGISYTEFTYTILQAIDFGHL 181

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLG-ERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
            +N +C++Q+GGSDQWGNI  GI+L        + + LT PL+T + G K GK+ SGA+W
Sbjct: 182 NQNLNCKIQVGGSDQWGNITSGIELMRRMYGQTEAYGLTIPLVTKSDGKKFGKSESGAVW 241

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA--KLQGKEINEAKKIIAT 304
           L+ + TSPY F+Q+W N  D DV+ F K  T L   EI+R+   + +   + EA+K +A 
Sbjct: 242 LDADKTSPYEFYQFWINQSDDDVIKFLKYFTFLNKEEIERLEASRDEQPHLREAQKALAE 301

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLT 354
            +T ++HG++  + A   +   F   + S          + +P + +S D       ++ 
Sbjct: 302 NVTKLIHGQDALDDAIRISQALFSGDLKSLSAKELKEGFKDVPQVELSAD----NTNIVE 357

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +V+ G ++S  +AR  + + AI IN     +    +  +D        +  GKK + + 
Sbjct: 358 ALVETGISSSKRQAREDVNNGAIYINGERQQDVNYNLSSEDKIENAFTIIRRGKKKYFMV 417

Query: 415 H 415
           +
Sbjct: 418 N 418


>gi|34581532|ref|ZP_00143012.1| tyrosyl-tRNA synthetase [Rickettsia sibirica 246]
 gi|28262917|gb|EAA26421.1| tyrosyl-tRNA synthetase [Rickettsia sibirica 246]
          Length = 411

 Score =  500 bits (1288), Expect = e-139,   Method: Composition-based stats.
 Identities = 187/409 (45%), Positives = 280/409 (68%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           F+     +G+ HQ ++   L  +  +  + AYIG+D TA+SLH G L Q+M+L  LQ+ G
Sbjct: 3   FIEEFIHKGYFHQCTDLDRLTAITKETKIAAYIGFDCTATSLHIGSLMQIMILRLLQQHG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKPI ++GGGTS IGDP+++DE R+++  ++I +N E IK   S FIK+G GK+DA+ML+
Sbjct: 63  HKPIVIIGGGTSKIGDPTWKDEMRKILSKEDIAKNAEGIKKSLSKFIKFGDGKSDAIMLD 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL S  Y+D LR+ GS+FSVNRML+ +SV+ RL+R+Q LSFLEFNYM+LQAYDF  L
Sbjct: 123 NAEWLDSFNYLDFLRDFGSYFSVNRMLTMDSVKLRLERQQHLSFLEFNYMLLQAYDFYYL 182

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
           +K+Y+C LQ+GGSDQWGNI+ G DL  ++   ++F +T+PLLTT+SG KMGKT +GA+WL
Sbjct: 183 SKHYNCSLQLGGSDQWGNIVMGADLIRKISGKEVFGMTTPLLTTSSGAKMGKTAAGAVWL 242

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           N+++ SPY+++QYWRN +DAD+V FAK  +     E++R   L  ++IN AKK +A E+T
Sbjct: 243 NEDLLSPYDYYQYWRNCEDADIVRFAKLYSEFTQEELNRFESLAAEDINAAKKQLAYELT 302

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
            + H  + A+ A   A++ F+     +++PT+ + ++ +  G+    L  +AG  TS +E
Sbjct: 303 KLCHSEQAAKSALETAVKIFEEGQIDENLPTVVLEQEVLQAGISAYELFHEAGLVTSKSE 362

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           AR+ ++ N  KIN+ ++ +E + I          IKLS GKK HI+  +
Sbjct: 363 ARKLIRGNGAKINDRLVEDENMIINTNFLLDKKVIKLSAGKKRHILVRV 411


>gi|209542797|ref|YP_002275026.1| tyrosyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5]
 gi|209530474|gb|ACI50411.1| tyrosyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5]
          Length = 413

 Score =  500 bits (1288), Expect = e-139,   Method: Composition-based stats.
 Identities = 204/415 (49%), Positives = 273/415 (65%), Gaps = 4/415 (0%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           MP  KS+FL     RGFI Q ++   LD     G    YIG+D TA SLH G L Q+M+L
Sbjct: 1   MP--KSEFLQEAEARGFIFQCTDIDALDAALQAGPAAGYIGFDPTADSLHVGSLIQIMML 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             +QK GH+P++LMGGGT+ IGDPSFR+E+R++M  + I  N+  I+G    F+++  G 
Sbjct: 59  RLMQKHGHRPVALMGGGTAKIGDPSFREEARQLMTDETIAANLRGIEGCLRQFLQF-DGA 117

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
             A + NN  WL  + YIDLLR++G  FSVNRML+F+SVRSRL+REQ L+FLEFNY ILQ
Sbjct: 118 AGARLANNADWLDRLSYIDLLRDVGVHFSVNRMLAFDSVRSRLEREQGLTFLEFNYSILQ 177

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           +YDF EL++     LQMGGSDQWGNI+ GIDL  R    ++F LT+PLLTTASG KMGK+
Sbjct: 178 SYDFRELSRTQGVTLQMGGSDQWGNIVSGIDLVRRTDQKQVFGLTTPLLTTASGAKMGKS 237

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
             GAIWL+      + +WQ+WRN+DDADV  F +  T LP++E DR+A L G EINEAKK
Sbjct: 238 ARGAIWLSASRLPIFEYWQFWRNVDDADVGRFLRLFTDLPIAECDRLAALGGTEINEAKK 297

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           ++ATE T + HGR EA+ AA AA   F+       +P  +I+ D ++ G+    L V++G
Sbjct: 298 VLATEATALCHGRAEADAAAEAARRTFEDGAAPAALPGTTIAADLLAAGIPAFRLFVESG 357

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            A S  EARR ++    +IN+  + +E   I   D  + G IKLS G+K+HI+  
Sbjct: 358 MAASNGEARRLIRGGGARINDVAVQDEGQVITTTDL-ADGAIKLSSGRKHHILVR 411


>gi|37526487|ref|NP_929831.1| tyrosyl-tRNA synthetase [Photorhabdus luminescens subsp. laumondii
           TTO1]
 gi|81419219|sp|Q7N3W6|SYY1_PHOLL RecName: Full=Tyrosyl-tRNA synthetase 1; AltName:
           Full=Tyrosine--tRNA ligase 1; Short=TyrRS 1
 gi|36785918|emb|CAE14970.1| tyrosine-tRNA synthetase (tyrosine--tRNA ligase) (TYRRS)
           [Photorhabdus luminescens subsp. laumondii TTO1]
          Length = 424

 Score =  500 bits (1288), Expect = e-139,   Method: Composition-based stats.
 Identities = 154/415 (37%), Positives = 228/415 (54%), Gaps = 11/415 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           ++ +  L ERG I Q+++   L    +QG V+ Y G+D TA SLH GHL  L+ L   Q 
Sbjct: 4   NNLIKQLQERGLIAQVTDENALAERLAQGPVSLYCGFDPTADSLHLGHLVPLLCLKRFQL 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++     ++E +EKI+   S F+ +  G+  A  
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKATERKLNTEATVKEWVEKIRRQVSPFLDFDCGENSAKT 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYDF 184
            NN  W  ++  +  LR+IG  FSVN+M++ E+V+ RL R+   +SF EF+Y +LQ+YDF
Sbjct: 124 ANNYDWFGNMDVLAFLRDIGKHFSVNQMINKEAVKQRLNRDDVGISFTEFSYNLLQSYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L + +   LQ+GGSDQWGNI  GIDL  R+   ++F +T PL+T + GTK GKT  GA
Sbjct: 184 ARLNEVHGVELQIGGSDQWGNITSGIDLTRRITQKQVFGMTVPLITKSDGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ---GKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + +ID + +     GK    A+ +
Sbjct: 244 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMNLEDIDALEEEDKNSGKAPR-AQYV 302

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTL 355
           +A ++T MVHG E    A       F  +           +    +   E+ +G  L   
Sbjct: 303 LAEQVTGMVHGEEGLAAAKRITESLFSGAAADLTEADFAQLAQDGMPVIELEKGADLQQA 362

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
           +V AG   S  +AR  + SNA+ IN    S  +      +        L  GKK+
Sbjct: 363 LVNAGLVPSRGQARTMISSNAVAINGEKQSEPEYLFTDSNRLFDRYTLLRRGKKH 417


>gi|254461107|ref|ZP_05074523.1| tyrosyl-tRNA synthetase [Rhodobacterales bacterium HTCC2083]
 gi|206677696|gb|EDZ42183.1| tyrosyl-tRNA synthetase [Rhodobacteraceae bacterium HTCC2083]
          Length = 429

 Score =  500 bits (1287), Expect = e-139,   Method: Composition-based stats.
 Identities = 214/414 (51%), Positives = 288/414 (69%), Gaps = 2/414 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KSDF++++ ERGF+   ++ + LD +  +G + AYIG+D TA SLH G L Q+M+L WLQ
Sbjct: 18  KSDFIAVMMERGFLADCTDYQGLDEVALKGGMPAYIGFDATAESLHVGSLIQIMMLRWLQ 77

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           KTG KPI+LMGGGT+ +GDPSFR + R ++  ++I +NI  IK +FS+++ YG G +DAL
Sbjct: 78  KTGGKPITLMGGGTTKVGDPSFRADERPLLTPEKIDDNIAGIKKVFSAYLTYGDGPSDAL 137

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M+NN  WL  + Y+D LR+IG  FSVNRML+FESV+SRL REQSLSFLEFNYMILQAYDF
Sbjct: 138 MINNAEWLDGLNYLDFLRDIGKHFSVNRMLAFESVKSRLDREQSLSFLEFNYMILQAYDF 197

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL + Y C LQMGGSDQWGNI+ GIDL  R+   ++F LTSPLLTT+ G KMGK+  GA
Sbjct: 198 LELNRRYGCVLQMGGSDQWGNIVNGIDLTRRVLDNQIFGLTSPLLTTSDGKKMGKSADGA 257

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WLN +M SPY FWQ+WRN  DADV  F K  T +P+ E +R+  L G EINEAK I+A 
Sbjct: 258 VWLNPDMRSPYEFWQFWRNTTDADVGRFLKLYTEMPVEECERLGALAGSEINEAKVILAN 317

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           EIT + HG E A  A   A E F+       +PT+ ++++E+  G+ ++  IV+AG A S
Sbjct: 318 EITKLCHGAEAAGTAEATAREVFEKGGVGDDLPTLELTREELGDGLSIVQAIVRAGLAKS 377

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLCG 418
             +A+R +  N  KI+++ +++  L +      S   IKLS GKK H +  L G
Sbjct: 378 GKDAKRLISENGAKIDDAPLNDAGLMLDAAALASP--IKLSAGKKRHALIVLKG 429


>gi|86138669|ref|ZP_01057242.1| tyrosyl-tRNA synthetase [Roseobacter sp. MED193]
 gi|85824729|gb|EAQ44931.1| tyrosyl-tRNA synthetase [Roseobacter sp. MED193]
          Length = 418

 Score =  500 bits (1287), Expect = e-139,   Method: Composition-based stats.
 Identities = 214/413 (51%), Positives = 281/413 (68%), Gaps = 3/413 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KSDF++++ ERGF+   ++ + LD    QGV  AYIG+D TA SLH G L Q+M+L W Q
Sbjct: 6   KSDFVAVMMERGFLADCTDYQGLDEALMQGVKPAYIGFDATAKSLHVGSLIQIMMLRWFQ 65

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG-TGKTDA 123
           KTGH+PI+LMGGGT+ +GDPSFR + R ++   +I +NI  IK +FS++I Y       A
Sbjct: 66  KTGHQPITLMGGGTTKVGDPSFRADERPLLTEAQIDDNIAGIKKVFSAYIDYDSDAPNKA 125

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           LMLNN  WL  + Y++ LR+IG  FSVNRML+FESV+SRL REQSLSFLEFNYMILQAYD
Sbjct: 126 LMLNNAEWLDGLNYLEFLRDIGRHFSVNRMLAFESVKSRLDREQSLSFLEFNYMILQAYD 185

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+EL + Y C LQMGGSDQWGNI+ GIDL  R+    ++ LTSPLLTT+ G KMGK+  G
Sbjct: 186 FLELNRRYGCILQMGGSDQWGNIVNGIDLTRRVLDNSIYGLTSPLLTTSDGKKMGKSQDG 245

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIA 303
           A+WLN +M SPY FWQ+WRN  DADV  F K  T LP+ E DR+  L G E+N AK I+A
Sbjct: 246 AVWLNADMRSPYEFWQFWRNTTDADVGRFLKLYTELPVDECDRLGALAGSEVNAAKVILA 305

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
            E+T ++HG E A  A   A E F+     + +PT+S+S +E+  G+ ++ LIVK+G A 
Sbjct: 306 NEVTKLLHGAEAAVAAEATAREVFEKGGIGEDLPTLSLSSEELGDGISIVQLIVKSGLAK 365

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           S  +A+R +  N  K+++  + +  L I   D  S   IKLS GKK H +  L
Sbjct: 366 SGKDAKRLINENGAKLDDKPLMDAGLMITATDLSSP--IKLSAGKKRHALVQL 416


>gi|306826301|ref|ZP_07459635.1| tyrosine--tRNA ligase [Streptococcus sp. oral taxon 071 str.
           73H25AP]
 gi|304431577|gb|EFM34559.1| tyrosine--tRNA ligase [Streptococcus sp. oral taxon 071 str.
           73H25AP]
          Length = 418

 Score =  500 bits (1287), Expect = e-139,   Method: Composition-based stats.
 Identities = 151/419 (36%), Positives = 228/419 (54%), Gaps = 17/419 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L ERG I Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  G
Sbjct: 3   IFDELKERGLIFQTTDEEALRKALEEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKP +L+GG T +IGDPSF+D  R +     ++  ++ I+G  S F+ +  G+  A+M+N
Sbjct: 63  HKPYALVGGATGLIGDPSFKDAERSLQTKDTVEGWVKSIQGQLSRFLDFENGENKAVMVN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W  SI +ID LR++G +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF  L
Sbjct: 123 NYDWFGSISFIDFLRDVGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFYVL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            + ++  LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WL
Sbjct: 181 NQEHNVTLQIGGSDQWGNMTAGTELLRRKADKTGHVITVPLITDATGKKFGKSEGNAVWL 240

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATE 305
           N E TSPY  +Q+W N+ DAD V F K  T L + EI+ + K      +E  A+K++A E
Sbjct: 241 NPEKTSPYEMYQFWMNVMDADAVRFLKIFTFLSLDEIEDIRKQFEAAPHERLAQKVLARE 300

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTL 355
           + T+VHG E  ++A     + F  +I +          + +P   +  DE      ++ L
Sbjct: 301 VVTLVHGEEAYKEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVKADE---NHNIVEL 357

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +V +G   S  +AR  +++ AI +N   I +    +   D        +  GKK + + 
Sbjct: 358 LVSSGVVNSKRQAREDVQNGAIYVNGDRIQDLDYVLSDADKLENELTVIRRGKKKYFVL 416


>gi|229586879|ref|YP_002845380.1| tyrosyl-tRNA synthetase [Rickettsia africae ESF-5]
 gi|259517013|sp|C3PNX7|SYY_RICAE RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|228021929|gb|ACP53637.1| Tyrosyl-tRNA synthetase [Rickettsia africae ESF-5]
          Length = 411

 Score =  500 bits (1287), Expect = e-139,   Method: Composition-based stats.
 Identities = 189/409 (46%), Positives = 280/409 (68%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           F+     +G+ HQ ++   L  +  +  + AYIG+D TA+SLH G L Q+M+L  LQ+ G
Sbjct: 3   FIEEFINKGYFHQCTDLDRLTAITKETKIAAYIGFDCTATSLHIGSLMQIMILRLLQQHG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKPI ++GGGTS IGDP+++DE R+++  ++I +N E IK   S FIK+G GK+DA+ML+
Sbjct: 63  HKPIVIIGGGTSKIGDPTWKDEVRKIVSKEDIAKNAEGIKKSLSKFIKFGDGKSDAIMLD 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL S  Y+D LR+ GS+FSVNRML+ +SV+ RL+REQ LSFLEFNYM+LQAYDF  L
Sbjct: 123 NAEWLDSFNYLDFLRDFGSYFSVNRMLTMDSVKLRLEREQHLSFLEFNYMLLQAYDFYYL 182

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
           +K+Y+C LQ+GGSDQWGNI+ G DL  ++   ++F +T+PLLTT+SG KMGKT +GA+WL
Sbjct: 183 SKHYNCSLQLGGSDQWGNIVMGADLIRKISGKEVFGMTTPLLTTSSGAKMGKTAAGAVWL 242

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           N+++ SPY+++QYWRN +DAD+V FAK  +     E++R   L  ++IN AKK +A E+T
Sbjct: 243 NEDLLSPYDYYQYWRNCEDADIVRFAKLYSEFTQEELNRFESLAAEDINAAKKQLAYELT 302

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
            + H  + A+ A   A++ F+     +++PT+ + K+ +  G+    L  +AG  TS +E
Sbjct: 303 KLCHSEQAAKSALETAVKIFEEGQIDENLPTVVLEKEVLQAGISAYELFHEAGLVTSKSE 362

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           AR+ ++ N  KIN+ ++ +E + I          IKLS GKK HI+  +
Sbjct: 363 ARKLIRGNGAKINDRLVEDENMIINTNFLLDKKVIKLSAGKKRHILVRV 411


>gi|170743905|ref|YP_001772560.1| tyrosyl-tRNA synthetase [Methylobacterium sp. 4-46]
 gi|168198179|gb|ACA20126.1| tyrosyl-tRNA synthetase [Methylobacterium sp. 4-46]
          Length = 426

 Score =  500 bits (1287), Expect = e-139,   Method: Composition-based stats.
 Identities = 215/415 (51%), Positives = 290/415 (69%), Gaps = 2/415 (0%)

Query: 3   AFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
           A +S+FL +L ERG++HQ S+   +D    +G +TAY+GYD TA SLH GHL  +M+L W
Sbjct: 10  APRSEFLKVLIERGYVHQCSDFAGVDEAAREGRLTAYVGYDCTAPSLHIGHLLSIMMLHW 69

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD 122
           LQ TG  P++LMGGGT+ +GDPS RDE+RR++  ++I  N  +I   F+ F+++G     
Sbjct: 70  LQATGGTPVALMGGGTTRVGDPSGRDETRRILTVEQIDANKAEIGKTFARFLRFGEAAGL 129

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
           A M +N  WL  + YI++LRE+G  FSVNRMLS +SVR RL+R+Q LSFLEFNYMILQAY
Sbjct: 130 ARMADNAEWLTQLNYIEMLREVGRHFSVNRMLSMDSVRLRLERDQELSFLEFNYMILQAY 189

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DFVEL + Y   LQMGGSDQWGNI+ GIDLG RL TP+L ALT PL+TTASG KMGKT S
Sbjct: 190 DFVELNRRYGVTLQMGGSDQWGNIVTGIDLGRRLGTPQLHALTCPLMTTASGAKMGKTAS 249

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKII 302
           GA+WLN ++ SP+ +WQ+WRN +DADV  F +  T LP+ E DR+A L G EINEAKK++
Sbjct: 250 GAVWLNPDLLSPWEYWQFWRNTEDADVGRFLRLFTLLPLPETDRLAALGGAEINEAKKVL 309

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLI--VKAG 360
           ATE T ++HGRE AE AA  A   F+     + +PT+ I +  ++ G+G+L       A 
Sbjct: 310 ATEATALLHGREAAEAAAETARRTFEEGAAPETLPTVEIPRAALAAGLGVLAAFGPDHAK 369

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
              ST+EARR ++S  +K+N++ +S+E+  +   D    G IKLSFG+K H++  
Sbjct: 370 LLPSTSEARRQVRSGGLKVNDAAVSDERAVLGEGDLTGDGVIKLSFGRKKHVLLR 424


>gi|301056168|ref|YP_003794379.1| tyrosyl-tRNA synthetase [Bacillus anthracis CI]
 gi|300378337|gb|ADK07241.1| tyrosyl-tRNA synthetase [Bacillus cereus biovar anthracis str. CI]
          Length = 418

 Score =  499 bits (1286), Expect = e-139,   Method: Composition-based stats.
 Identities = 155/418 (37%), Positives = 229/418 (54%), Gaps = 11/418 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
             L  L  RG I+Q ++   L+ L  +  V  Y G+D TA SLH GH+  +++L   Q  
Sbjct: 2   GILQDLEFRGLINQQTDAEGLEQLLEKESVKLYCGFDPTADSLHIGHMLPVLMLRRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI+L+GGGT +IGDPS +   R +     +    E IK   S+F+++   +  A M 
Sbjct: 62  GHQPIALVGGGTGMIGDPSGKKAERTLNTKDTVAYYTESIKNQLSNFLEFENVENPATMA 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL ++  I  LR+IG  FS+N ML+ ++V SRL  E  +SF EF+YMILQ+YDF+ 
Sbjct: 122 NNYDWLGNLDVISFLRDIGKNFSLNYMLAKDTVASRL--ETGISFTEFSYMILQSYDFLN 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGER-LKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           L ++++CRLQ+GGSDQWGNI  G++L  +  +  K F LT PL+T + GTK GKT  GAI
Sbjct: 180 LYQHHNCRLQIGGSDQWGNITAGLELIRKSEEDAKAFGLTIPLVTKSDGTKFGKTEGGAI 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIA 303
           WL+ E T+PY F+Q+W N DD DVV + K  T L   EI  + K   +  E   A+K + 
Sbjct: 240 WLDPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLSHEEILELEKQVAEAPEKRAAQKALG 299

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRGMGLLTLIV 357
            E+T +VHG E  E+A   +   F  S+       I        S +  +    L+ L+V
Sbjct: 300 AEMTKLVHGEEALEQAIKISAALFSGSVAELTASEIEQGFKDVPSVERTAEDTVLIDLLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           ++  + S  +AR  + + AI +N          +  +D        +  GKK + +  
Sbjct: 360 ESKISPSKRQAREDVTNGAIYVNGERTQALDYVVTEKDRIEGKFTIIRRGKKKYFLIR 417


>gi|322375991|ref|ZP_08050501.1| tyrosine--tRNA ligase [Streptococcus sp. C300]
 gi|321278941|gb|EFX55984.1| tyrosine--tRNA ligase [Streptococcus sp. C300]
          Length = 418

 Score =  499 bits (1286), Expect = e-139,   Method: Composition-based stats.
 Identities = 151/419 (36%), Positives = 228/419 (54%), Gaps = 17/419 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L ERG I Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  G
Sbjct: 3   IFDELKERGLIFQTTDEEALRKALEEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKP +L+GG T +IGDPSF+D  R +     ++  ++ I+G  S F+ +  G+  A+M+N
Sbjct: 63  HKPYALVGGATGLIGDPSFKDAERSLQTKDTVEGWVKSIQGQLSRFLDFENGENKAVMVN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W  SI +ID LR++G +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF  L
Sbjct: 123 NYDWFGSISFIDFLRDVGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFYVL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            + ++  LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WL
Sbjct: 181 NQEHNVTLQIGGSDQWGNMTAGTELLRRKADKTGHVITVPLITDATGKKFGKSEGNAVWL 240

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATE 305
           N E TSPY  +Q+W N+ DAD V F K  T L + EI+ + K      +E  A+K++A E
Sbjct: 241 NPEKTSPYEMYQFWMNVMDADAVRFLKIFTFLSLDEIEDIRKQFEAAPHERLAQKVLARE 300

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTL 355
           + T+VHG E  ++A     + F  +I +          + +P   +  DE      ++ L
Sbjct: 301 VVTLVHGEEAYKEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVQADE---NHNIVEL 357

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +V +G   S  +AR  +++ AI +N   I +    +   D        +  GKK + + 
Sbjct: 358 LVSSGVVNSKRQAREDVQNGAIYVNGDRIQDLDYVLSGADKLENELTVIRRGKKKYFVL 416


>gi|229013863|ref|ZP_04170991.1| Tyrosyl-tRNA synthetase 1 [Bacillus mycoides DSM 2048]
 gi|228747532|gb|EEL97407.1| Tyrosyl-tRNA synthetase 1 [Bacillus mycoides DSM 2048]
          Length = 418

 Score =  499 bits (1286), Expect = e-139,   Method: Composition-based stats.
 Identities = 155/418 (37%), Positives = 228/418 (54%), Gaps = 11/418 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
             L  L  RG I+Q ++   L+ L  +  V  Y G+D TA SLH GH+  +++L   Q  
Sbjct: 2   GILQDLEFRGLINQQTDAEGLEQLLEKESVKLYCGFDPTADSLHIGHMLPVLMLRRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI+L+GGGT +IGDPS +   R +     +    E IK   S+F+++G     A M 
Sbjct: 62  GHQPIALVGGGTGMIGDPSGKKAERTLNTKDTVAYYTESIKNQLSNFLEFGNVDNPATMA 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL ++  I  LR+IG  F +N ML+ ++V SRL  +  +SF EF+YMILQ+YDF+ 
Sbjct: 122 NNYDWLGNLDVISFLRDIGKNFGLNYMLAKDTVASRL--DTGISFTEFSYMILQSYDFLN 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGER-LKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           L +N++CRLQ+GGSDQWGNI  G++L  +  +  K F LT PL+T + GTK GKT  GAI
Sbjct: 180 LYQNHNCRLQIGGSDQWGNITAGLELIRKSEEDAKAFGLTIPLVTKSDGTKFGKTEGGAI 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIA 303
           WL+ E T+PY F+Q+W N DD DVV + K  T L   EI  + K   +  E   A+K + 
Sbjct: 240 WLDPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLSHEEILELEKQVTEAPEKRAAQKSLG 299

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRGMGLLTLIV 357
           +E+T +VHG E  E+A   +   F  S+       I        S +  +    L+ L+V
Sbjct: 300 SEMTKLVHGEEALEQAIKISAALFSGSVAELTASEIEQGFKDVPSVERTAEDTVLIDLLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           ++  + S  +AR  + + AI +N          +   D        +  GKK + +  
Sbjct: 360 ESKISPSKRQAREDVTNGAIYVNGERTQALDYVVTENDRIEGKFTIIRRGKKKYFLIR 417


>gi|323140411|ref|ZP_08075340.1| tyrosine--tRNA ligase [Phascolarctobacterium sp. YIT 12067]
 gi|322415096|gb|EFY05886.1| tyrosine--tRNA ligase [Phascolarctobacterium sp. YIT 12067]
          Length = 407

 Score =  499 bits (1286), Expect = e-139,   Method: Composition-based stats.
 Identities = 161/410 (39%), Positives = 253/410 (61%), Gaps = 7/410 (1%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
              +L ERGFI Q+S+  E+  L  +  +T YIG+D TA SLH GH   LM++  +Q+ G
Sbjct: 3   VYDVLMERGFIKQMSHEDEIKELLEKEKITFYIGFDPTADSLHVGHFIALMMMSHMQRAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+PI L+GGGT ++GDPS +DE R+M+  + I  NI   K   S FI +G  K  A+++N
Sbjct: 63  HRPIVLLGGGTGMVGDPSGKDEMRKMLTPEFIAHNIACFKKQMSRFIDFGEDK--AIIVN 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  + Y+ LLRE+G  F+VNRML+ E  + R   E+ L+F EFNYMI+Q YDF +L
Sbjct: 121 NADWLLDLNYVQLLREVGVHFTVNRMLAAECFKKR--WEKGLTFFEFNYMIMQGYDFWKL 178

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
             +++C +++GG DQW N++ G++L  R      + +T  LLTT+ G KMGKT  GA+WL
Sbjct: 179 HHDHNCIMELGGDDQWSNMLAGVELIRRKDQKPAYCMTCKLLTTSDGRKMGKTEKGALWL 238

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           + E TSPY+F+QYWRN+ D+DV +    LT LPM E+ R++ L+   INEAKK++A E+T
Sbjct: 239 DPEKTSPYDFYQYWRNVADSDVENCLSLLTFLPMDEVRRLSALKDAAINEAKKVLAYEVT 298

Query: 308 TMVHGREEAEKAATAAMECFDMSIHS-QHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
            +VHG E A +A  A    F  +     ++P I I+ ++++    ++ ++  A   +S  
Sbjct: 299 KLVHGEEAARQAQEATEALFGGNAKDMSNVPAIEITSEDMTA--KIIDVLTAAKVFSSKR 356

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           EAR+ +    + + ++++ + +  +    FD+  ++ +  GKK +    +
Sbjct: 357 EARQLIAQGGLTVADTVLQDAEACLSADMFDADKSLLIRKGKKKYFRLLV 406


>gi|331265554|ref|YP_004325184.1| tyrosyl-tRNA synthetase [Streptococcus oralis Uo5]
 gi|326682226|emb|CBY99843.1| tyrosyl-tRNA synthetase [Streptococcus oralis Uo5]
          Length = 418

 Score =  499 bits (1286), Expect = e-139,   Method: Composition-based stats.
 Identities = 152/419 (36%), Positives = 228/419 (54%), Gaps = 17/419 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L ERG I Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  G
Sbjct: 3   IFDELKERGLIFQTTDEEALRKALEEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKP +L+GG T +IGDPSF+D  R +     ++  ++ I+G  S F+ +  G+  A+M+N
Sbjct: 63  HKPYALVGGATGLIGDPSFKDAERSLQTKDTVEGWVKSIQGQLSRFLDFENGENKAVMVN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W  SI +ID LR+IG +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF  L
Sbjct: 123 NYDWFGSISFIDFLRDIGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFYVL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            + ++  LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WL
Sbjct: 181 NQEHNVTLQIGGSDQWGNMTAGTELLRRKADKTGHVITVPLITDATGKKFGKSEGNAVWL 240

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATE 305
           N E TSPY  +Q+W N+ DAD V F K  T L + EI+ + K      +E  A+K++A E
Sbjct: 241 NPEKTSPYEMYQFWMNVMDADAVRFLKIFTFLSLDEIEDIRKQFEAAPHERLAQKVLARE 300

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTL 355
           + T+VHG E  ++A     + F  +I +          + +P   +  DE      ++ L
Sbjct: 301 VVTLVHGEEAYKEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVQADE---NHNIVEL 357

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +V +G   S  +AR  +++ AI +N   I +    +   D        +  GKK + + 
Sbjct: 358 LVSSGVVNSKRQAREDVQNGAIYVNGDRIQDLDYVLSDADKLENELTVIRRGKKKYFVL 416


>gi|126735683|ref|ZP_01751428.1| tyrosyl-tRNA synthetase, putative [Roseobacter sp. CCS2]
 gi|126714870|gb|EBA11736.1| tyrosyl-tRNA synthetase, putative [Roseobacter sp. CCS2]
          Length = 416

 Score =  499 bits (1286), Expect = e-139,   Method: Composition-based stats.
 Identities = 213/412 (51%), Positives = 287/412 (69%), Gaps = 2/412 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KSDF++++  RGF+   ++ + LD   S+GVV AYIG+D TA SLH G L Q+M++ WLQ
Sbjct: 6   KSDFMNVMMTRGFLADCTDYQGLDEALSKGVVPAYIGFDATAKSLHVGSLIQIMMMRWLQ 65

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           KTGHKPI+LMGGGT+ +GDPSFR + R ++   +I +NI  IK +FS+++ YG   TDAL
Sbjct: 66  KTGHKPITLMGGGTTKVGDPSFRADERPLLGPDQIDDNIAGIKQVFSAYLTYGDAPTDAL 125

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M+NN  WL  + Y+D LR+IG  FS+NRMLSFESV+SRL REQSLSFLEFNYMILQAYDF
Sbjct: 126 MINNAEWLDGLNYLDFLRDIGRHFSINRMLSFESVKSRLDREQSLSFLEFNYMILQAYDF 185

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL + Y C LQMGGSDQWGNI+ GIDL  R+   +++ LTSPLLTT+ G KMGK+ SGA
Sbjct: 186 LELNRRYGCLLQMGGSDQWGNIVNGIDLTRRVLDQEIYGLTSPLLTTSDGKKMGKSQSGA 245

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WLN +M +PY FWQ+WRN  DAD   F K  T LP+ E +R+  L+G +IN AK I+A 
Sbjct: 246 VWLNADMCAPYEFWQFWRNTTDADTGRFLKLYTELPIEECERLGALEGSDINAAKIILAN 305

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E+TT++HG   A+ A   A E F+       +PT+++S D++  G+ ++ LIVK+G A S
Sbjct: 306 EVTTLLHGAAAAQAAEATAREVFEKGGVGDDLPTLTLSADDLGDGISIVQLIVKSGLAKS 365

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             EA+R +  N  K+N++ +    + I      +   IKLS GKK H +  L
Sbjct: 366 GKEAKRLIAENGAKLNDAPLHEAGMMIDADALSTP--IKLSAGKKRHALVQL 415


>gi|326201599|ref|ZP_08191470.1| methyl-accepting chemotaxis sensory transducer [Clostridium
           papyrosolvens DSM 2782]
 gi|325988199|gb|EGD49024.1| methyl-accepting chemotaxis sensory transducer [Clostridium
           papyrosolvens DSM 2782]
          Length = 407

 Score =  499 bits (1286), Expect = e-139,   Method: Composition-based stats.
 Identities = 171/410 (41%), Positives = 244/410 (59%), Gaps = 7/410 (1%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG I Q+++  E+  L + G  T YIG+D TA SLH GH   L L+  LQ  G
Sbjct: 3   IYDELVARGLIAQVTDEEEIRELINSGKATFYIGFDPTADSLHVGHFMALCLMKRLQMAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           +KP+ L+GGGT  IGDPS R + R MM  + IQ N +  K     FI++G  K  A+M+N
Sbjct: 63  NKPVVLLGGGTGYIGDPSGRTDLRSMMTPETIQHNCDCFKKQMERFIEFGDDK--AIMVN 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  + YI+LLR++G+ FSVN ML  E  + R+  E+ LSFLE NYMI+Q+YDF  L
Sbjct: 121 NADWLLKLNYIELLRDVGAHFSVNNMLRAECYKQRM--EKGLSFLELNYMIMQSYDFYYL 178

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            +NY C +Q GG+DQW N++ G +L  R      +A+T  LL  + G KMGKT  GA+WL
Sbjct: 179 YQNYGCNMQFGGNDQWSNMLGGTELIRRKLGKDAYAMTITLLMNSEGNKMGKTAKGAVWL 238

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           +   T+P+ F+QYWRN+ DADV+   + LT LP+ +ID M K +G ++NEAK+I+A E+T
Sbjct: 239 DPNKTTPFEFYQYWRNVGDADVLKCIRMLTFLPLEQIDAMDKWKGSQLNEAKEILAYELT 298

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTN 366
            ++H  EEA+KA  A+   F       HMPT  I  + +  G +G+L LI       S +
Sbjct: 299 KLIHDEEEAQKAKDASHALFAAGTDDSHMPTTEIEVEHLVDGVIGILDLITACRLTASKS 358

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           EARR ++   I IN++ + +    I  +   +   +K+  GKK +    +
Sbjct: 359 EARRLIQQGGIFINDAKVESIDCNITSKQLKNG--VKIRKGKKTYHKVLI 406


>gi|269219360|ref|ZP_06163214.1| tyrosine--tRNA ligase [Actinomyces sp. oral taxon 848 str. F0332]
 gi|269211153|gb|EEZ77493.1| tyrosine--tRNA ligase [Actinomyces sp. oral taxon 848 str. F0332]
          Length = 420

 Score =  499 bits (1286), Expect = e-139,   Method: Composition-based stats.
 Identities = 148/420 (35%), Positives = 223/420 (53%), Gaps = 9/420 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +D L  L  RG I Q ++   L    ++G VT Y G+D TA+SLH GHL  + ++  LQ 
Sbjct: 2   TDILDELQWRGLIAQHTDIDALRAALAEGPVTFYCGFDPTAASLHHGHLVAVKVMRHLQM 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH P++L+GG T +IGDPS R E R +  +  +      ++G   S + +  G+  A +
Sbjct: 62  AGHNPLALVGGATGLIGDPSGRKEERNLNEADVVAGWAAALRGQLESLLDF-EGEHPARI 120

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  W   +  ID LR+IG  F +  MLS ++V  RL+ ++ +SF EF+Y ILQA D++
Sbjct: 121 VNNLDWTGPMSTIDFLRDIGKNFRLGTMLSKDTVARRLESDEGISFTEFSYQILQANDYL 180

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           +L + Y C L++GG+DQWGN++ G+DL  +++   +  +T+PL+T + GTK GKT  GAI
Sbjct: 181 QLYRRYGCTLEVGGNDQWGNLVGGMDLIRKVEGESVHVMTNPLITKSDGTKFGKTAGGAI 240

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIA 303
           WLN EM SPY F+Q+W N  D DV+   K  T     EI  +     +     EA+K +A
Sbjct: 241 WLNPEMFSPYRFYQFWLNTADDDVIHMLKVFTFRTREEIAELETALAERPHAREAQKALA 300

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQ------HMPTISISKDEVSRGMGLLTLIV 357
            ++TT VHG +  E+   A+   F                   + + E S G  L+ L V
Sbjct: 301 EDVTTWVHGADATERVKAASRALFGGGGLESLDARTLADAVAELPRAEGSVGTPLIELFV 360

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
             G       ARR + S  + +NN  I +    +   D    G + L  GKKN  +  + 
Sbjct: 361 ATGLEKGLGAARRTVASGGLYLNNVKIDDGAKVLGSSDLLPGGVVLLRRGKKNLAVVGVV 420


>gi|322386312|ref|ZP_08059943.1| tyrosine--tRNA ligase [Streptococcus cristatus ATCC 51100]
 gi|321269679|gb|EFX52608.1| tyrosine--tRNA ligase [Streptococcus cristatus ATCC 51100]
          Length = 418

 Score =  499 bits (1285), Expect = e-139,   Method: Composition-based stats.
 Identities = 151/419 (36%), Positives = 229/419 (54%), Gaps = 17/419 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L ERG I Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  G
Sbjct: 3   IFDELQERGLIFQTTDEEALRKALEEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKP +L+GG T +IGDPSF+D  R +   + +   ++ I+G  S F+ +  G+  A+M+N
Sbjct: 63  HKPYALVGGATGLIGDPSFKDAERSLQTKETVDGWVQSIQGQLSRFLDFENGENKAVMVN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W  SI +ID LR++G +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF  L
Sbjct: 123 NYDWFGSISFIDFLRDVGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFFVL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            K ++  LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WL
Sbjct: 181 NKEHNVTLQIGGSDQWGNMTAGTELLRRKADKTGHVITVPLITDATGKKFGKSEGNAVWL 240

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATE 305
           N E TSPY  +Q+W N+ DAD + F K  T L + EI+ + K      +E  A+KI+A E
Sbjct: 241 NPEKTSPYEMYQFWMNVMDADAIRFLKIFTFLSLDEIEDIRKQFEAAPHERLAQKILARE 300

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTL 355
           + T+VHG E  ++A     + F  +I +          + +P   +  DE    + ++ +
Sbjct: 301 VVTLVHGEEAYKEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVQADE---NLNIVEI 357

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +V +G   S  +AR  +++ AI +N   I +    +   D        +  GKK + + 
Sbjct: 358 LVSSGVVNSKRQAREDVQNGAIYVNGDRIQDLDYVLGDADKLENELTVIRRGKKKYFVL 416


>gi|307707771|ref|ZP_07644250.1| tyrosyl-tRNA synthetase [Streptococcus mitis NCTC 12261]
 gi|307616269|gb|EFN95463.1| tyrosyl-tRNA synthetase [Streptococcus mitis NCTC 12261]
          Length = 418

 Score =  499 bits (1285), Expect = e-139,   Method: Composition-based stats.
 Identities = 152/419 (36%), Positives = 228/419 (54%), Gaps = 17/419 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L ERG I Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  G
Sbjct: 3   IFDELKERGLIFQTTDEEALRKALEEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKP +L+GG T +IGDPSF+D  R +     +   ++ I+G  S F+ +  G+  A+M+N
Sbjct: 63  HKPYALVGGATGLIGDPSFKDAERSLQTKDTVDGWVKSIQGQLSRFLDFENGENKAVMVN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W  SI +ID LR+IG +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF  L
Sbjct: 123 NYDWFGSISFIDFLRDIGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFFVL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            ++++  LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WL
Sbjct: 181 NQDHNVTLQIGGSDQWGNMTAGTELLRRKADKTGHVITVPLITDATGKKFGKSEGNAVWL 240

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATE 305
           N E TSPY  +Q+W N+ DAD V F K  T L + EI+ + K      +E  A+K++A E
Sbjct: 241 NPEKTSPYEMYQFWMNVMDADAVRFLKIFTFLSLDEIEDIRKQFEAAPHERLAQKVLARE 300

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTL 355
           + T+VHG E  ++A     + F  +I +          + +P   +  DE      ++ L
Sbjct: 301 VVTLVHGEEAYKEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVQADE---NHNIVEL 357

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +V +G   S  +AR  +++ AI +N   I +    +   D        +  GKK + + 
Sbjct: 358 LVSSGVVNSKRQAREDVQNGAIYVNGDRIQDLDYVLSDADKLENELTVIRRGKKKYFVL 416


>gi|228941839|ref|ZP_04104386.1| Tyrosyl-tRNA synthetase 1 [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|228974764|ref|ZP_04135330.1| Tyrosyl-tRNA synthetase 1 [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228981359|ref|ZP_04141659.1| Tyrosyl-tRNA synthetase 1 [Bacillus thuringiensis Bt407]
 gi|229163655|ref|ZP_04291603.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus R309803]
 gi|228619792|gb|EEK76670.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus R309803]
 gi|228778559|gb|EEM26826.1| Tyrosyl-tRNA synthetase 1 [Bacillus thuringiensis Bt407]
 gi|228785167|gb|EEM33180.1| Tyrosyl-tRNA synthetase 1 [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228818051|gb|EEM64129.1| Tyrosyl-tRNA synthetase 1 [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|326942444|gb|AEA18340.1| tyrosyl-tRNA synthetase [Bacillus thuringiensis serovar chinensis
           CT-43]
          Length = 418

 Score =  499 bits (1285), Expect = e-139,   Method: Composition-based stats.
 Identities = 154/418 (36%), Positives = 227/418 (54%), Gaps = 11/418 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
             L  L  RG I+Q ++   L+ L  +  V  Y G+D TA SLH GH+  +++L   Q  
Sbjct: 2   GILQDLEFRGLINQQTDAEGLEQLLEKESVKLYCGFDPTADSLHIGHMLPVLMLRRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI+L+GGGT +IGDPS +   R +     +    E IK   S+F+++      A M 
Sbjct: 62  GHQPIALVGGGTGMIGDPSGKKAERTLNTKDTVAYYTESIKNQLSNFLEFENVDNPATMA 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL ++  I  LR+IG  F +N ML+ ++V SRL  E  +SF EF+YMILQ+YDF+ 
Sbjct: 122 NNYDWLGNLDVISFLRDIGKNFGLNYMLAKDTVASRL--ETGISFTEFSYMILQSYDFLN 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGER-LKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           L ++++CRLQ+GGSDQWGNI  G++L  +  +  K F LT PL+T + GTK GKT  GAI
Sbjct: 180 LYQHHNCRLQIGGSDQWGNITAGLELIRKSEEDAKAFGLTIPLVTKSDGTKFGKTEGGAI 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIA 303
           WL+ E T+PY F+Q+W N DD DVV + K  T L   EI  + K   +  E   A+K + 
Sbjct: 240 WLDPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLSHEEILELEKQVAEAPEKRAAQKALG 299

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRGMGLLTLIV 357
           +E+T +VHG E  E+A   +   F  S+       I        S +  +    L+ L+V
Sbjct: 300 SEMTKLVHGEEALEQAIKISAALFSGSVAELTASEIEQGFKDVPSVERTAEDTVLIDLLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           ++  + S  +AR  + + AI +N          +   D        +  GKK + +  
Sbjct: 360 ESKISPSKRQAREDVTNGAIYVNGERTQALDYVVTENDRIEGKFTIIRRGKKKYFLIR 417


>gi|315612023|ref|ZP_07886940.1| tyrosine--tRNA ligase [Streptococcus sanguinis ATCC 49296]
 gi|315315825|gb|EFU63860.1| tyrosine--tRNA ligase [Streptococcus sanguinis ATCC 49296]
          Length = 418

 Score =  499 bits (1285), Expect = e-139,   Method: Composition-based stats.
 Identities = 152/419 (36%), Positives = 228/419 (54%), Gaps = 17/419 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L ERG I Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  G
Sbjct: 3   IFDELKERGLIFQTTDEEALRKALEEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKP +L+GG T +IGDPSF+D  R +     ++  ++ I+G  S F+ +  G+  A+M+N
Sbjct: 63  HKPYALVGGATGLIGDPSFKDAERSLQTKDTVEGWVKSIQGQLSRFLDFENGENKAVMVN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W  SI +ID LR+IG +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF  L
Sbjct: 123 NYDWFGSISFIDFLRDIGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFYVL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            + ++  LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WL
Sbjct: 181 NQEHNVTLQIGGSDQWGNMTAGTELLRRKADKTGHVITVPLITDATGKKFGKSEGNAVWL 240

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATE 305
           N E TSPY  +Q+W N+ DAD V F K  T L + EI+ + K      +E  A+K++A E
Sbjct: 241 NPEKTSPYEMYQFWMNVMDADAVRFLKIFTFLSLDEIEDIRKQFEAAPHERLAQKVLARE 300

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTL 355
           + T+VHG E  ++A     + F  +I +          + +P   +  DE      ++ L
Sbjct: 301 VVTLVHGEEAYKEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVQADE---NHNIVEL 357

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +V +G   S  +AR  +++ AI +N   I +    +   D        +  GKK + + 
Sbjct: 358 LVSSGVVNSKRQAREDVQNGAIYVNGDRIQDLDYVLSDTDKLENELTVIRRGKKKYFVL 416


>gi|168486915|ref|ZP_02711423.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae CDC1087-00]
 gi|168494146|ref|ZP_02718289.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae CDC3059-06]
 gi|183570135|gb|EDT90663.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae CDC1087-00]
 gi|183575898|gb|EDT96426.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae CDC3059-06]
          Length = 418

 Score =  499 bits (1285), Expect = e-139,   Method: Composition-based stats.
 Identities = 152/419 (36%), Positives = 229/419 (54%), Gaps = 17/419 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L ERG I Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  G
Sbjct: 3   IFDELKERGLIFQTTDEEALRKALEEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKP +L+GG T +IGDPSF+D  R +     +   ++ I+G  S F+ +  G+  A+M+N
Sbjct: 63  HKPYALVGGATGLIGDPSFKDAERSLQTKDTVDGWVKSIQGQLSRFLDFENGENKAVMVN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W  SI +ID LR+IG +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF  L
Sbjct: 123 NYDWFGSISFIDFLRDIGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFFVL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            ++++  LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WL
Sbjct: 181 NQDHNVTLQIGGSDQWGNMTAGTELLRRKADKTGHVITVPLITDATGKKFGKSEGNAVWL 240

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATE 305
           N E TSPY  +Q+W N+ DAD V F K  T L + EI+ + K      +E  A+K++A E
Sbjct: 241 NPEKTSPYEMYQFWMNVMDADAVRFLKIFTFLSLDEIEDIRKQFEAAPHERLAQKVLARE 300

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTL 355
           + T+VHG E  ++A     + F  +I +          + +P   +  DE +    ++ L
Sbjct: 301 VVTLVHGEESYKEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVQADEHN---NIVEL 357

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +V +G   S  +AR  +++ AI +N   I +    +   D        +  GKK + + 
Sbjct: 358 LVSSGIVNSKRQAREDVQNGAIYVNGDRIQDLDYVLSDADKLENELTVIRRGKKKYFVL 416


>gi|307705759|ref|ZP_07642604.1| tyrosyl-tRNA synthetase [Streptococcus mitis SK597]
 gi|307620677|gb|EFN99768.1| tyrosyl-tRNA synthetase [Streptococcus mitis SK597]
          Length = 418

 Score =  499 bits (1285), Expect = e-139,   Method: Composition-based stats.
 Identities = 150/416 (36%), Positives = 226/416 (54%), Gaps = 11/416 (2%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L ERG I Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  G
Sbjct: 3   IFDELKERGLIFQTTDEEALRKALEEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKP +L+GG T +IGDPSF+D  R +     +   ++ I+G  S F+ +  G+  A+M+N
Sbjct: 63  HKPYALVGGATGLIGDPSFKDAERSLQTKDTVNGWVKSIQGQLSRFLDFENGENKAVMVN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W  SI +ID LR+IG +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF  L
Sbjct: 123 NYDWFGSISFIDFLRDIGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFFVL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            ++++  LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WL
Sbjct: 181 NQDHNVTLQIGGSDQWGNMTAGTELLRRKADKTGHVITVPLITDATGKKFGKSEGNAVWL 240

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATE 305
           N E TSPY  +Q+W N+ DAD V F K  T L + EI+ + K      +E  A+K++A E
Sbjct: 241 NPEKTSPYEMYQFWMNVMDADAVRFLKIFTFLSLDEIEDIRKQFEAAPHERLAQKVLARE 300

Query: 306 ITTMVHGREEAEKAATAAMECFDMSI-------HSQHMPTISISKDEVSRGMGLLTLIVK 358
           + T+VHG E  ++A     + F  +I         Q +  +   + +      ++ L+V 
Sbjct: 301 VVTLVHGEEAYKEALNITEQLFAGNIKNLSVKELKQGLRGVPNHQVQADENHNIVELLVS 360

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +G   S  +AR  +++ AI +N   I +    +   D        +  GKK + + 
Sbjct: 361 SGVVNSKRQAREDVQNGAIYVNGDRIQDLDYVLTDADKLENELTVIRRGKKKYFVL 416


>gi|196043850|ref|ZP_03111087.1| tyrosyl-tRNA synthetase [Bacillus cereus 03BB108]
 gi|196025186|gb|EDX63856.1| tyrosyl-tRNA synthetase [Bacillus cereus 03BB108]
          Length = 418

 Score =  499 bits (1285), Expect = e-139,   Method: Composition-based stats.
 Identities = 154/418 (36%), Positives = 226/418 (54%), Gaps = 11/418 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
             L  L  RG I+Q ++   L+ L  +  V  Y G+D TA SLH GH+  +++L   Q  
Sbjct: 2   GILQDLEFRGLINQQTDAEGLEQLLEKESVKLYCGFDPTADSLHIGHMLPVLMLRRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI+L+GGGT +IGDPS +   R +     +    E IK   S+F+++      A M 
Sbjct: 62  GHQPIALVGGGTGMIGDPSGKKAERTLNTKDTVAYYTESIKNQLSNFLEFENVDNPATMA 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL ++  I  LR+IG  F +N ML+ ++V SRL  E  +SF EF+YMILQ+YDF+ 
Sbjct: 122 NNYDWLGNLDVISFLRDIGKNFGLNYMLAKDTVASRL--ETGISFTEFSYMILQSYDFLN 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGER-LKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           L ++++CRLQ+GGSDQWGNI  G++L  +  +  K F LT PL+T + GTK GKT  GAI
Sbjct: 180 LYQHHNCRLQIGGSDQWGNITAGLELIRKSEEDAKAFGLTIPLVTKSDGTKFGKTEGGAI 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIA 303
           WL+ E T+PY F+Q+W N DD DVV + K  T L   EI  + K   +  E   A+K + 
Sbjct: 240 WLDPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLSHEEILELEKQVAEAPEKRAAQKALG 299

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRGMGLLTLIV 357
            E+T +VHG E  E+A   +   F  S+       I        S +  +    L+ L+V
Sbjct: 300 AEMTKLVHGEEALEQAIKISAALFSGSVAELTASEIEQGFKDVPSVERTAEDTVLIDLLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           ++  + S  +AR  + + AI +N          +   D        +  GKK + +  
Sbjct: 360 ESKISPSKRQAREDVTNGAIYVNGERTQALDYVVTENDRIEGKFTIIRRGKKKYFLIR 417


>gi|327459630|gb|EGF05976.1| tyrosine--tRNA ligase [Streptococcus sanguinis SK1]
 gi|327473095|gb|EGF18522.1| tyrosine--tRNA ligase [Streptococcus sanguinis SK408]
 gi|327490874|gb|EGF22655.1| tyrosine--tRNA ligase [Streptococcus sanguinis SK1058]
          Length = 419

 Score =  499 bits (1285), Expect = e-139,   Method: Composition-based stats.
 Identities = 147/416 (35%), Positives = 228/416 (54%), Gaps = 11/416 (2%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L ERG + Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  G
Sbjct: 4   IFDELKERGLVFQTTDEAALRKALEEGQVSYYSGYDPTADSLHLGHLVAILTSRRLQLAG 63

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKP +L+GG T +IGDPSFRD  R +   + ++  ++ I+   S F+ +  G   A M+N
Sbjct: 64  HKPYALVGGATGLIGDPSFRDAERSLQTKETVEGWVKSIQDQLSRFLDFEKGDNKAEMVN 123

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W  SI +ID LR++G +F+VN M+S +SV+SR+  E  +S+ EF Y I+Q YDF  L
Sbjct: 124 NYDWFSSISFIDFLRDVGKYFTVNYMMSKDSVKSRI--ETGISYTEFAYQIMQGYDFYIL 181

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            +N+D  LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WL
Sbjct: 182 NQNHDVTLQIGGSDQWGNMTAGTELLRRKADKTGHVITVPLITDATGKKFGKSEGNAVWL 241

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATE 305
           N + TSPY  +Q+W N+ DAD + F K  T L + EI+ + +      +E  A+K++A E
Sbjct: 242 NPDKTSPYEMYQFWMNVMDADAIRFLKIFTFLSLDEIEEIRQQFEAAPHERLAQKVLARE 301

Query: 306 ITTMVHGREEAEKAATAAMECFDMSI-------HSQHMPTISISKDEVSRGMGLLTLIVK 358
           + ++VHG+E  ++A     + F  +I         Q +  +   + +    + ++ L+V 
Sbjct: 302 VVSLVHGQEAYQEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVQAEDNLNIVELLVT 361

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           AG   S  +AR  +++ AI +N   I +    +   D        +  GKK + + 
Sbjct: 362 AGVVNSKRQAREDVQNGAIYLNGERIQDLDYVLSDSDKLEDELTVIRRGKKKYFVL 417


>gi|30264732|ref|NP_847109.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. Ames]
 gi|47530205|ref|YP_021554.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49187550|ref|YP_030803.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|49481693|ref|YP_038706.1| tyrosyl-tRNA synthetase [Bacillus thuringiensis serovar konkukian
           str. 97-27]
 gi|52140844|ref|YP_085985.1| tyrosyl-tRNA synthetase [Bacillus cereus E33L]
 gi|118479801|ref|YP_896952.1| tyrosyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
 gi|165869597|ref|ZP_02214255.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|167634052|ref|ZP_02392375.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. A0442]
 gi|167638031|ref|ZP_02396309.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. A0193]
 gi|170685688|ref|ZP_02876911.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. A0465]
 gi|177651320|ref|ZP_02934151.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. A0174]
 gi|196033099|ref|ZP_03100512.1| tyrosyl-tRNA synthetase [Bacillus cereus W]
 gi|218905888|ref|YP_002453722.1| tyrosyl-tRNA synthetase [Bacillus cereus AH820]
 gi|222098132|ref|YP_002532189.1| tyrosyl-tRNA synthetase [Bacillus cereus Q1]
 gi|225866644|ref|YP_002752022.1| tyrosyl-tRNA synthetase [Bacillus cereus 03BB102]
 gi|227817451|ref|YP_002817460.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. CDC 684]
 gi|228917309|ref|ZP_04080864.1| Tyrosyl-tRNA synthetase 1 [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|228929712|ref|ZP_04092729.1| Tyrosyl-tRNA synthetase 1 [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228935970|ref|ZP_04098780.1| Tyrosyl-tRNA synthetase 1 [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228948407|ref|ZP_04110690.1| Tyrosyl-tRNA synthetase 1 [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|228987909|ref|ZP_04148017.1| Tyrosyl-tRNA synthetase 1 [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|229093761|ref|ZP_04224860.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus Rock3-42]
 gi|229124228|ref|ZP_04253420.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus 95/8201]
 gi|229186921|ref|ZP_04314076.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus BGSC 6E1]
 gi|229198819|ref|ZP_04325513.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus m1293]
 gi|229604566|ref|YP_002868940.1| tyrosine--tRNA ligase [Bacillus anthracis str. A0248]
 gi|254687471|ref|ZP_05151327.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. CNEVA-9066]
 gi|254725033|ref|ZP_05186816.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. A1055]
 gi|254741808|ref|ZP_05199495.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. Kruger B]
 gi|254754594|ref|ZP_05206629.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. Vollum]
 gi|254757426|ref|ZP_05209453.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. Australia 94]
 gi|81394595|sp|Q6HCM0|SYY1_BACHK RecName: Full=Tyrosyl-tRNA synthetase 1; AltName:
           Full=Tyrosine--tRNA ligase 1; Short=TyrRS 1
 gi|81685883|sp|Q633D2|SYY1_BACCZ RecName: Full=Tyrosyl-tRNA synthetase 1; AltName:
           Full=Tyrosine--tRNA ligase 1; Short=TyrRS 1
 gi|81714900|sp|Q81KS9|SYY1_BACAN RecName: Full=Tyrosyl-tRNA synthetase 1; AltName:
           Full=Tyrosine--tRNA ligase 1; Short=TyrRS 1
 gi|30259407|gb|AAP28595.1| tyrosine--tRNA ligase [Bacillus anthracis str. Ames]
 gi|47505353|gb|AAT34029.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49181477|gb|AAT56853.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|49333249|gb|AAT63895.1| tyrosine--tRNA ligase (tyrosyl-tRNA synthetase) [Bacillus
           thuringiensis serovar konkukian str. 97-27]
 gi|51974313|gb|AAU15863.1| tyrosine--tRNA ligase (tyrosyl-tRNA synthetase) [Bacillus cereus
           E33L]
 gi|118419026|gb|ABK87445.1| tyrosyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
 gi|164714426|gb|EDR19945.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|167513848|gb|EDR89216.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. A0193]
 gi|167530853|gb|EDR93555.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. A0442]
 gi|170670152|gb|EDT20892.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. A0465]
 gi|172083146|gb|EDT68208.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. A0174]
 gi|195994528|gb|EDX58483.1| tyrosyl-tRNA synthetase [Bacillus cereus W]
 gi|218538126|gb|ACK90524.1| tyrosyl-tRNA synthetase [Bacillus cereus AH820]
 gi|221242190|gb|ACM14900.1| tyrosine--tRNA ligase (tyrosyl-tRNA synthetase) [Bacillus cereus
           Q1]
 gi|225788112|gb|ACO28329.1| tyrosine--tRNA ligase [Bacillus cereus 03BB102]
 gi|227004662|gb|ACP14405.1| tyrosine--tRNA ligase [Bacillus anthracis str. CDC 684]
 gi|228584655|gb|EEK42779.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus m1293]
 gi|228596658|gb|EEK54323.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus BGSC 6E1]
 gi|228659530|gb|EEL15178.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus 95/8201]
 gi|228689646|gb|EEL43454.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus Rock3-42]
 gi|228771832|gb|EEM20290.1| Tyrosyl-tRNA synthetase 1 [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|228811394|gb|EEM57732.1| Tyrosyl-tRNA synthetase 1 [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|228823738|gb|EEM69560.1| Tyrosyl-tRNA synthetase 1 [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228829891|gb|EEM75511.1| Tyrosyl-tRNA synthetase 1 [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228842350|gb|EEM87443.1| Tyrosyl-tRNA synthetase 1 [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|229268974|gb|ACQ50611.1| tyrosine--tRNA ligase [Bacillus anthracis str. A0248]
          Length = 418

 Score =  499 bits (1285), Expect = e-139,   Method: Composition-based stats.
 Identities = 154/418 (36%), Positives = 228/418 (54%), Gaps = 11/418 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
             L  L  RG I+Q ++   L+ L  +  V  Y G+D TA SLH GH+  +++L   Q  
Sbjct: 2   GILQDLEFRGLINQQTDAEGLEQLLEKESVKLYCGFDPTADSLHIGHMLPVLMLRRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI+L+GGGT +IGDPS +   R +     +    E IK   S+F+++   +  A M 
Sbjct: 62  GHQPIALVGGGTGMIGDPSGKKAERTLNTKDTVAYYTESIKNQLSNFLEFENVENPATMA 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL ++  I  LR+IG  F +N ML+ ++V SRL  E  +SF EF+YMILQ+YDF+ 
Sbjct: 122 NNYDWLGNLDVISFLRDIGKNFGLNYMLAKDTVASRL--ETGISFTEFSYMILQSYDFLN 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGER-LKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           L ++++CRLQ+GGSDQWGNI  G++L  +  +  K F LT PL+T + GTK GKT  GAI
Sbjct: 180 LYQHHNCRLQIGGSDQWGNITAGLELIRKSEEDAKAFGLTIPLVTKSDGTKFGKTEGGAI 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIA 303
           WL+ E T+PY F+Q+W N DD DVV + K  T L   EI  + K   +  E   A+K + 
Sbjct: 240 WLDPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLSHEEILELEKQVAEAPEKRAAQKALG 299

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRGMGLLTLIV 357
            E+T +VHG E  E+A   +   F  S+       I        S +  +    L+ L+V
Sbjct: 300 AEMTKLVHGEEALEQAIKISAALFSGSVAELTASEIEQGFKDVPSVERTAEDTVLIDLLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           ++  + S  +AR  + + AI +N          +  +D        +  GKK + +  
Sbjct: 360 ESKISPSKRQAREDVTNGAIYVNGERTQALDYVVTEKDRIEGKFTIIRRGKKKYFLIR 417


>gi|239978757|ref|ZP_04701281.1| putative tyrosyl-tRNA synthetase [Streptomyces albus J1074]
 gi|291450647|ref|ZP_06590037.1| tyrosyl-tRNA synthetase [Streptomyces albus J1074]
 gi|291353596|gb|EFE80498.1| tyrosyl-tRNA synthetase [Streptomyces albus J1074]
          Length = 423

 Score =  499 bits (1285), Expect = e-139,   Method: Composition-based stats.
 Identities = 142/423 (33%), Positives = 220/423 (52%), Gaps = 11/423 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +D +  L  RG   Q ++   L    + G VT Y G+D TA+SLH GHL Q++ +  LQ+
Sbjct: 2   TDIVDELKWRGLFAQSTDEDALRKALADGPVTFYCGFDPTAASLHVGHLVQVLTMRRLQQ 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG-KTDAL 124
            G +P++L+GG T  IGDP      R +   + + E + +++     F+ +       A 
Sbjct: 62  AGLRPLALVGGATGQIGDPRP-TAERTLNSPETVAEWVNRLRDQIEPFLDFDASLPNAAR 120

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M+NN  W  ++  I+ LR+IG  F VN+ML+ ESV  RL+ ++ +S+ EF+Y +LQ  DF
Sbjct: 121 MVNNLDWTANLSAIEFLRDIGKHFRVNKMLTKESVARRLESQEGISYTEFSYQLLQGMDF 180

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASGTKMGKTLSG 243
           ++L +NY C LQ GGSDQWGN+  GIDL  RL+   ++ AL +PL+T A GTK GK+  G
Sbjct: 181 LQLYRNYGCTLQQGGSDQWGNLTAGIDLIHRLEPDAQVHALATPLMTKADGTKFGKSEGG 240

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPM--SEIDRMAKLQGKEINEAKKI 301
           AIWLN  MT+PY F+Q+W N DD DV  + + L+       E       +  +   A++ 
Sbjct: 241 AIWLNASMTTPYAFYQFWLNTDDRDVSRYLRILSFRSREELEELEKVTEERPQARTAQRA 300

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQ------HMPTISISKDEVSRGMGLLTL 355
           +A E+TT+VHG +E      A+   F     +             +          ++ L
Sbjct: 301 LAEELTTLVHGEDECRAVIAASKALFGQGELADLDAATLEAALYELPHVRADGFAPVVDL 360

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           + + G   S + ARR +K     +NN  ++ E      +D      + +  GKKN     
Sbjct: 361 LAETGLVASKSAARRTVKEGGAYVNNVKVTAEDAVPGPEDLLHGRWLVVRRGKKNLAAVE 420

Query: 416 LCG 418
           + G
Sbjct: 421 ITG 423


>gi|114768827|ref|ZP_01446453.1| tyrosyl-tRNA synthetase [alpha proteobacterium HTCC2255]
 gi|114549744|gb|EAU52625.1| tyrosyl-tRNA synthetase [alpha proteobacterium HTCC2255]
          Length = 416

 Score =  499 bits (1285), Expect = e-139,   Method: Composition-based stats.
 Identities = 197/412 (47%), Positives = 269/412 (65%), Gaps = 2/412 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KS+FL  +  RGF+   ++ + LD    +G + AYIG+D TA SLH G L Q+M+L WLQ
Sbjct: 6   KSEFLQEMLSRGFLQDCTDIQGLDEKLLEGCMPAYIGFDATADSLHIGSLIQIMMLRWLQ 65

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           KTGHKPI LMGGGT+ IGDPS +DESR+++ ++ I ENI  I+ +F  ++ +G    DA 
Sbjct: 66  KTGHKPIPLMGGGTTKIGDPSGKDESRQLITTEIINENINGIQKVFEKYLSFGDNSNDAK 125

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           ++NN  WL  + YI+ LR+IG  F++NRM+S ESV+ RL REQ L+FLEFNYM+LQAYDF
Sbjct: 126 IINNAEWLDKLNYIEFLRDIGKHFTINRMISMESVKLRLDREQPLTFLEFNYMLLQAYDF 185

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL   YD  LQMGGSDQWGNI+ GIDL  RL    +F LT+PLLT A G+KMGK+ +GA
Sbjct: 186 MELNNRYDVSLQMGGSDQWGNIVNGIDLTRRLNKKSVFGLTTPLLTKADGSKMGKSANGA 245

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           IWLN +  SPY FWQ+WRN  DADV  F K  T LP+SE DR+  L+G+ INEAK I+A 
Sbjct: 246 IWLNSDKLSPYEFWQFWRNTLDADVGKFLKLFTELPVSECDRLGSLEGQNINEAKIILAN 305

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E+T M HG E A  +   A + F      +++PT+ I   E+  G+     +V+ G  +S
Sbjct: 306 EVTKMCHGEEAAISSEKTAHKVFTEDSSDENLPTLEILNTEIIDGISFTQALVRTGLVSS 365

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             EA+R +     ++N+ +I++    +   D   T   K+S  KK H +  +
Sbjct: 366 GKEAKRIIAGGGARLNDQVINDAGFMLYAADLQKTP--KISASKKKHALIKV 415


>gi|228993395|ref|ZP_04153311.1| Tyrosyl-tRNA synthetase 1 [Bacillus pseudomycoides DSM 12442]
 gi|228999442|ref|ZP_04159021.1| Tyrosyl-tRNA synthetase 1 [Bacillus mycoides Rock3-17]
 gi|229006998|ref|ZP_04164626.1| Tyrosyl-tRNA synthetase 1 [Bacillus mycoides Rock1-4]
 gi|228754237|gb|EEM03654.1| Tyrosyl-tRNA synthetase 1 [Bacillus mycoides Rock1-4]
 gi|228760387|gb|EEM09354.1| Tyrosyl-tRNA synthetase 1 [Bacillus mycoides Rock3-17]
 gi|228766463|gb|EEM15106.1| Tyrosyl-tRNA synthetase 1 [Bacillus pseudomycoides DSM 12442]
          Length = 418

 Score =  499 bits (1285), Expect = e-139,   Method: Composition-based stats.
 Identities = 155/422 (36%), Positives = 230/422 (54%), Gaps = 19/422 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
             L  L  RG I+Q ++   L  L  +  V  Y G+D TA SLH GH+  +++L   Q  
Sbjct: 2   GILQDLEFRGLINQQTDAEGLQQLLEKESVKLYCGFDPTADSLHIGHMLPVLMLRRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI+L+GGGT +IGDPS +   R +     +    E IK   S+F+++   +  A M 
Sbjct: 62  GHQPIALVGGGTGMIGDPSGKKAERTLNTKDTVAYYTESIKNQLSNFLEFENVENPATMA 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL ++  I  LR+IG  F +N ML+ ++V SRL  E  +SF EF+YMILQ+YDF+ 
Sbjct: 122 NNYDWLGNLDVITFLRDIGKNFGLNYMLAKDTVASRL--ETGISFTEFSYMILQSYDFLN 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGER-LKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           L +   CRLQ+GGSDQWGNI  G++L  +  +  K F LT PL+T + GTK GKT  GAI
Sbjct: 180 LYQQQGCRLQIGGSDQWGNITAGLELIRKSEEDAKAFGLTIPLVTKSDGTKFGKTEGGAI 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIA 303
           WL+ E T+PY F+Q+W N DD DVV + K  T L   EI  + K   +  E   A+K +A
Sbjct: 240 WLDPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLSHEEILELEKQVSEAPEKRAAQKALA 299

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLL 353
           +E+T +VHG E  E+A   +   F  S+            + +P++  S ++      L+
Sbjct: 300 SEMTKLVHGAEALEQAIKISAALFSGSVAELTANEIEQGFKDVPSVERSAEDTV----LI 355

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            L+V++  + S  +AR  + + AI +N          +  +D        +  GKK + +
Sbjct: 356 DLLVESKISPSKRQAREDVTNGAIYVNGERTQALDYVVTEKDRIEGKFTIIRRGKKKYFL 415

Query: 414 CH 415
             
Sbjct: 416 IR 417


>gi|307710959|ref|ZP_07647382.1| tyrosyl-tRNA synthetase [Streptococcus mitis SK321]
 gi|307617199|gb|EFN96376.1| tyrosyl-tRNA synthetase [Streptococcus mitis SK321]
          Length = 418

 Score =  499 bits (1285), Expect = e-139,   Method: Composition-based stats.
 Identities = 150/416 (36%), Positives = 226/416 (54%), Gaps = 11/416 (2%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L ERG I Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  G
Sbjct: 3   IFDELKERGLIFQTTDEEALRKALEEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKP +L+GG T +IGDPSF+D  R +     +   ++ I+G  S F+ +  G+  A+M+N
Sbjct: 63  HKPYALVGGATGLIGDPSFKDAERSLQTKDTVDGWVKSIQGQLSRFLDFENGENKAVMVN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W  SI +ID LR+IG +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF  L
Sbjct: 123 NYDWFGSISFIDFLRDIGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFFVL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            ++++  LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WL
Sbjct: 181 NQDHNVTLQIGGSDQWGNMTAGTELLRRKADKTGHVITVPLITDATGKKFGKSEGNAVWL 240

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATE 305
           N E TSPY  +Q+W N+ DAD V F K  T L + EI+ + K      +E  A+K++A E
Sbjct: 241 NPEKTSPYEMYQFWMNVMDADAVRFLKIFTFLSLDEIEDIRKQFEAAPHERLAQKVLARE 300

Query: 306 ITTMVHGREEAEKAATAAMECFDMSI-------HSQHMPTISISKDEVSRGMGLLTLIVK 358
           + T+VHG E  ++A     + F  +I         Q +  +   + +      ++ L+V 
Sbjct: 301 VVTLVHGEEAYKEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVQAEENHNIVELLVS 360

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +G   S  +AR  +++ AI +N   I +    +   D        +  GKK + + 
Sbjct: 361 SGVVNSKRQAREDVQNGAIYVNGDRIQDLDYVLSDADKLENELTVIRRGKKKYFVL 416


>gi|229019888|ref|ZP_04176686.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus AH1273]
 gi|229026114|ref|ZP_04182491.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus AH1272]
 gi|229032310|ref|ZP_04188283.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus AH1271]
 gi|229175374|ref|ZP_04302889.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus MM3]
 gi|228608206|gb|EEK65513.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus MM3]
 gi|228729090|gb|EEL80093.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus AH1271]
 gi|228735192|gb|EEL85810.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus AH1272]
 gi|228741408|gb|EEL91610.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus AH1273]
          Length = 418

 Score =  499 bits (1285), Expect = e-139,   Method: Composition-based stats.
 Identities = 154/418 (36%), Positives = 227/418 (54%), Gaps = 11/418 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
             L  L  RG I+Q ++   L+ L  +  V  Y G+D TA SLH GH+  +++L   Q  
Sbjct: 2   GILQDLEFRGLINQQTDAEGLEQLLEKESVKLYCGFDPTADSLHIGHMLPVLMLRRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI+L+GGGT +IGDPS +   R +     +    E IK   S+F+++      A M 
Sbjct: 62  GHQPIALVGGGTGMIGDPSGKKAERTLNTKDTVAYYTESIKNQLSNFLEFENVDNPATMA 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL ++  I  LR+IG  F +N ML+ ++V SRL  +  +SF EF+YMILQ+YDF+ 
Sbjct: 122 NNYDWLGNLDVISFLRDIGKNFGLNYMLAKDTVASRL--DTGISFTEFSYMILQSYDFLN 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGER-LKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           L +N++CRLQ+GGSDQWGNI  G++L  +  +  K F LT PL+T + GTK GKT  GAI
Sbjct: 180 LYQNHNCRLQIGGSDQWGNITAGLELIRKSEEDAKAFGLTIPLVTKSDGTKFGKTEGGAI 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIA 303
           WL+ E T+PY F+Q+W N DD DVV + K  T L   EI  + K   +  E   A+K + 
Sbjct: 240 WLDPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLSHEEILELEKQVAEAPEKRAAQKALG 299

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRGMGLLTLIV 357
           +E+T +VHG E  E+A   +   F  S+       I        S +  +    L+ L+V
Sbjct: 300 SEMTKLVHGEEALEQAIKISAALFSGSVAELTASEIEQGFKDVPSVERTAEDTVLIDLLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           ++  + S  +AR  + + AI +N          +   D        +  GKK + +  
Sbjct: 360 ESKISPSKRQAREDVTNGAIYVNGERTQALDYVVTENDRIEGKFTIIRRGKKKYFLIR 417


>gi|47565074|ref|ZP_00236117.1| tyrosyl-tRNA synthetase [Bacillus cereus G9241]
 gi|47557860|gb|EAL16185.1| tyrosyl-tRNA synthetase [Bacillus cereus G9241]
          Length = 418

 Score =  499 bits (1285), Expect = e-139,   Method: Composition-based stats.
 Identities = 154/418 (36%), Positives = 227/418 (54%), Gaps = 11/418 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
             L  L  RG I+Q ++   L+ L  +  V  Y G+D TA SLH GH+  +++L   Q  
Sbjct: 2   GILQDLEFRGLINQQTDAEGLEQLLEKESVKLYCGFDPTADSLHIGHMLPVLMLRRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI+L+GGGT +IGDPS +   R +     +    E IK   S+F+++      A M 
Sbjct: 62  GHQPIALVGGGTGMIGDPSGKKAERTLNTKDTVAYYTESIKNQLSNFLEFENVDNPATMA 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL ++  I  LR+IG  F +N ML+ ++V SRL  E  +SF EF+YMILQ+YDF+ 
Sbjct: 122 NNYDWLGNLDVISFLRDIGKNFGLNYMLAKDTVASRL--ETGISFTEFSYMILQSYDFLN 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGER-LKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           L ++++CRLQ+GGSDQWGNI  G++L  +  +  K F LT PL+T + GTK GKT  GAI
Sbjct: 180 LYQHHNCRLQIGGSDQWGNITAGLELIRKSEEDAKAFGLTIPLVTKSDGTKFGKTEGGAI 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIA 303
           WL+ E T+PY F+Q+W N DD DVV + K  T L   EI  + K   +  E   A+K + 
Sbjct: 240 WLDPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLSHEEILELEKQVAEAPEKRAAQKALG 299

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRGMGLLTLIV 357
            E+T +VHG E  E+A   +   F  S+       I        S +  +    L+ L+V
Sbjct: 300 AEMTKLVHGEEALEQAIKISAALFSGSVAELTASEIEQGFKDVPSVERAAEDTVLIDLLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           ++  + S  +AR  + + AI +N          +  +D        +  GKK + +  
Sbjct: 360 ESKISPSKRQAREDVTNGAIYVNGERTQALDYVVTEKDRIEGKFTIIRRGKKKYFLIR 417


>gi|229087219|ref|ZP_04219366.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus Rock3-44]
 gi|228696100|gb|EEL48938.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus Rock3-44]
          Length = 418

 Score =  498 bits (1284), Expect = e-139,   Method: Composition-based stats.
 Identities = 154/422 (36%), Positives = 230/422 (54%), Gaps = 19/422 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
             L  L  RG I+Q ++   L+ L  +  V  Y G+D TA SLH GH+  +++L   Q  
Sbjct: 2   GILQDLEFRGLINQQTDAEGLEQLLEKESVKLYCGFDPTADSLHIGHMLPVLMLRRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI+L+GGGT +IGDPS +   R +     +    E IK   S+F+++      A M 
Sbjct: 62  GHQPIALVGGGTGMIGDPSGKKAERTLNTKDTVAYYTESIKNQLSNFLEFENVDNPATMA 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL ++  I  LR+IG  F +N ML+ ++V SRL  E  +SF EF+YMILQ+YDF+ 
Sbjct: 122 NNYDWLGNLDVITFLRDIGKNFGLNYMLAKDTVASRL--ETGISFTEFSYMILQSYDFLN 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGER-LKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           L + ++CRLQ+GGSDQWGNI  G++L  +  +  K F LT PL+T + GTK GKT  GAI
Sbjct: 180 LYQQHNCRLQIGGSDQWGNITAGLELIRKSEEDAKAFGLTIPLVTKSDGTKFGKTEGGAI 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIA 303
           WL+ E T+PY F+Q+W N DD DVV + K  T L   EI  + K   +  E   A+K + 
Sbjct: 240 WLDPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLSHEEILELEKQVAEAPEKRAAQKALG 299

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLL 353
           +E+T +VHG E  E+A   +   F  S+            + +P++  S ++      L+
Sbjct: 300 SEMTKLVHGEEALEQAIKISAALFSGSVAELTASEIEQGFKDVPSVERSAEDTV----LI 355

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            L+V++  + S  +AR  + + AI +N          +   D        +  GKK + +
Sbjct: 356 DLLVESKISPSKRQAREDVTNGAIYVNGERTQALDYVVTENDRIEGKFTIIRRGKKKYFL 415

Query: 414 CH 415
             
Sbjct: 416 IR 417


>gi|312865572|ref|ZP_07725798.1| tyrosine--tRNA ligase [Streptococcus downei F0415]
 gi|311098900|gb|EFQ57118.1| tyrosine--tRNA ligase [Streptococcus downei F0415]
          Length = 418

 Score =  498 bits (1284), Expect = e-139,   Method: Composition-based stats.
 Identities = 148/416 (35%), Positives = 226/416 (54%), Gaps = 11/416 (2%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L ERG I Q ++  +L      G V+ Y GYD TA SLH GHL  +++   LQ  G
Sbjct: 3   IFDELKERGLIFQTTDEEDLKKALEAGSVSFYSGYDPTADSLHLGHLVPILVCRHLQLAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKP  L+GG T +IGDPSF+D  R +   + ++  ++KI+   S F+ +  G   A M N
Sbjct: 63  HKPYPLVGGATGLIGDPSFKDTERSLQTKETVEGWVKKIQKQLSRFLDFENGDNKAEMTN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W  SI +ID LR++G +F++N M+S ESV+ R+  E  +S+ EF Y I+Q YDF EL
Sbjct: 123 NYDWFGSISFIDFLRDVGKYFTINYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFYEL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            + +   LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WL
Sbjct: 181 NRQHGVTLQIGGSDQWGNMTAGTELLRRKADKTGHVITVPLITDATGKKFGKSEGNAVWL 240

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATE 305
           + + TSPY  +Q+W N+ D D V F K  T LP+ EI  + +      +E  A+KI+A E
Sbjct: 241 DADKTSPYEMYQFWLNVMDDDAVRFLKIFTFLPLDEIAEIEEKFNAARHERLAQKILAKE 300

Query: 306 ITTMVHGREEAEKAATAAMECFDMSI-------HSQHMPTISISKDEVSRGMGLLTLIVK 358
           + T+VHG    ++A     + F  +I         Q +  +     +    + ++ ++VK
Sbjct: 301 VVTLVHGEAAYKEALQITKQLFAGNIRALSAQELKQGLSGVPNYAVQAEDDLNIVEILVK 360

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +G ++S  +AR  +++ AI IN   I +   Q+   D        +  GKK + + 
Sbjct: 361 SGISSSKRQAREDVQNGAIYINGERIQDLDYQLSDADKIDGELTVIRRGKKKYFVL 416


>gi|196040849|ref|ZP_03108147.1| tyrosine--tRNA ligase [Bacillus cereus NVH0597-99]
 gi|217962146|ref|YP_002340716.1| tyrosyl-tRNA synthetase [Bacillus cereus AH187]
 gi|229141395|ref|ZP_04269933.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus BDRD-ST26]
 gi|229158266|ref|ZP_04286333.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus ATCC 4342]
 gi|300118900|ref|ZP_07056613.1| tyrosyl-tRNA synthetase [Bacillus cereus SJ1]
 gi|196028303|gb|EDX66912.1| tyrosine--tRNA ligase [Bacillus cereus NVH0597-99]
 gi|217064110|gb|ACJ78360.1| tyrosyl-tRNA synthetase [Bacillus cereus AH187]
 gi|228625224|gb|EEK81984.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus ATCC 4342]
 gi|228642176|gb|EEK98469.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus BDRD-ST26]
 gi|298723745|gb|EFI64474.1| tyrosyl-tRNA synthetase [Bacillus cereus SJ1]
 gi|324328556|gb|ADY23816.1| tyrosyl-tRNA synthetase [Bacillus thuringiensis serovar finitimus
           YBT-020]
          Length = 418

 Score =  498 bits (1284), Expect = e-139,   Method: Composition-based stats.
 Identities = 154/418 (36%), Positives = 227/418 (54%), Gaps = 11/418 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
             L  L  RG I+Q ++   L+ L  +  V  Y G+D TA SLH GH+  +++L   Q  
Sbjct: 2   GILQDLEFRGLINQQTDAEGLEQLLEKESVKLYCGFDPTADSLHIGHMLPVLMLRRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI+L+GGGT +IGDPS +   R +     +    E IK   S+F+++      A M 
Sbjct: 62  GHQPIALVGGGTGMIGDPSGKKAERTLNTKDTVAYYTESIKNQLSNFLEFENVDNPATMA 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL ++  I  LR+IG  F +N ML+ ++V SRL  E  +SF EF+YMILQ+YDF+ 
Sbjct: 122 NNYDWLGNLDVISFLRDIGKNFGLNYMLAKDTVASRL--ETGISFTEFSYMILQSYDFLN 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGER-LKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           L ++++CRLQ+GGSDQWGNI  G++L  +  +  K F LT PL+T + GTK GKT  GAI
Sbjct: 180 LYQHHNCRLQIGGSDQWGNITAGLELIRKSEEDAKAFGLTIPLVTKSDGTKFGKTEGGAI 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIA 303
           WL+ E T+PY F+Q+W N DD DVV + K  T L   EI  + K   +  E   A+K + 
Sbjct: 240 WLDPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLSHEEILELEKQVAEAPEKRAAQKALG 299

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRGMGLLTLIV 357
            E+T +VHG E  E+A   +   F  S+       I        S +  +    L+ L+V
Sbjct: 300 AEMTKLVHGEEALEQAIKISAALFSGSVAELTASEIEQGFKDVPSVERTAEDTVLIDLLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           ++  + S  +AR  + + AI +N          +  +D        +  GKK + +  
Sbjct: 360 ESKISPSKRQAREDVTNGAIYVNGERTQALDYVVTEKDRIEGKFTIIRRGKKKYFLIR 417


>gi|97202191|sp|Q8DS44|SYY_STRMU RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
          Length = 418

 Score =  498 bits (1284), Expect = e-139,   Method: Composition-based stats.
 Identities = 146/419 (34%), Positives = 223/419 (53%), Gaps = 17/419 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG + Q ++   L      G V+ Y GYD TA SLH GHL  ++++  LQ  G
Sbjct: 3   IFEELKARGLVFQTTDEEALKKSLDDGQVSFYTGYDPTADSLHLGHLVPILVMRHLQLAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKP +L+GG T +IGDPSF+D+ R +   + ++  ++ I+     FI +  G   A M+N
Sbjct: 63  HKPYALVGGATGLIGDPSFKDDERSLQTKETVKNWVQSIRSQLERFIDFKHGDNKAQMVN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W+  I +ID LR++G +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF  L
Sbjct: 123 NYDWMGKITFIDFLRDVGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFYVL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            + +   LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WL
Sbjct: 181 NQEHAVTLQVGGSDQWGNMTAGTELIRRKANKTAHVITVPLITDATGKKFGKSEGNAVWL 240

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATE 305
           + + TSPY  +Q+W N+ DAD + F K  T L + EI+ +        +E  A+KI+A E
Sbjct: 241 DADKTSPYEMYQFWLNVMDADAIRFLKIFTFLSLDEIEDIRVKFEAAPHERLAQKILAKE 300

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTL 355
           + T VHG+   ++A     + F   I S           ++P  ++     +    ++ L
Sbjct: 301 VVTFVHGQTAYQEAVKITEQLFAGHIKSLSAKELKQGLSNVPNYAVKS---NDNHNIVEL 357

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +V AG   S  +AR  L++ AI IN   I +    +  QD        +  GKK + + 
Sbjct: 358 LVTAGIVNSKRQAREDLQNGAIYINGERIQDLTYNLSQQDKIDNELTVIRRGKKKYFVL 416


>gi|97197320|sp|Q65G35|SYY1_BACLD RecName: Full=Tyrosyl-tRNA synthetase 1; AltName:
           Full=Tyrosine--tRNA ligase 1; Short=TyrRS 1
          Length = 421

 Score =  498 bits (1284), Expect = e-139,   Method: Composition-based stats.
 Identities = 153/417 (36%), Positives = 234/417 (56%), Gaps = 12/417 (2%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  LS RG I Q ++   L  L  +  ++ Y G+D TA SLH GHL  +++L   Q  G
Sbjct: 4   ILDDLSFRGLIQQQTDEAGLRELLDKEKISLYSGFDPTADSLHIGHLLPILMLRRFQLAG 63

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+PI+L+GG T +IGDPS +   R +   + ++E  +KIK   S F+ +   +  A+M N
Sbjct: 64  HRPIALVGGATGLIGDPSGKKAERTLNNEEIVREWSQKIKNQLSRFLDFEAEENPAIMAN 123

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W+  +  ID LR++G  F +N ML+ ++V SR+  E  +S+ EF+YMILQ+ DF+ L
Sbjct: 124 NYDWIGKMNVIDFLRDVGKNFGINYMLAKDTVSSRI--ETGISYTEFSYMILQSLDFLNL 181

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGER-LKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
            +N +C+LQ+GGSDQWGNI  G++L  +  +  K F LT PL+T A GTK GKT  GAIW
Sbjct: 182 YRNQECKLQIGGSDQWGNITSGLELIRKSEENAKAFGLTIPLVTKADGTKFGKTEGGAIW 241

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIAT 304
           L+KE TS Y F+Q+W N DD DVV + K  T L   EI+ +A+      E  EA+K +A 
Sbjct: 242 LDKEKTSAYEFYQFWINTDDRDVVKYLKYFTFLSKEEIEDLAEKTETAPEKREAQKRLAE 301

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISIS-------KDEVSRGMGLLTLIV 357
           E+T +VHGRE  E+A   +   F   I       + +        + E +  + L+ ++V
Sbjct: 302 EVTVLVHGREAFEQAVNISKALFSGDIKQLTAEEVKVGFKGVPSLEVEKADELPLVEILV 361

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           ++  + S  +AR  + + A+ +N    ++    +   D        +  GKK + + 
Sbjct: 362 QSKLSPSKRQAREDITNGAVYVNGERRTDVADVLTADDRIEGQFTVIRRGKKKYFLL 418


>gi|42783842|ref|NP_981089.1| tyrosyl-tRNA synthetase [Bacillus cereus ATCC 10987]
 gi|81408860|sp|Q72Z73|SYY1_BACC1 RecName: Full=Tyrosyl-tRNA synthetase 1; AltName:
           Full=Tyrosine--tRNA ligase 1; Short=TyrRS 1
 gi|42739772|gb|AAS43697.1| tyrosyl-tRNA synthetase [Bacillus cereus ATCC 10987]
          Length = 418

 Score =  498 bits (1284), Expect = e-139,   Method: Composition-based stats.
 Identities = 153/418 (36%), Positives = 227/418 (54%), Gaps = 11/418 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
             L  L  RG I+Q ++   L+ L  +  V  Y G+D TA SLH GH+  +++L   Q  
Sbjct: 2   GILQDLEFRGLINQQTDAEGLEQLLEKESVKLYCGFDPTADSLHIGHMLPVLMLRRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI+L+GGGT +IGDPS +   R +     +    E IK   S+F+++      A M 
Sbjct: 62  GHQPIALVGGGTGMIGDPSGKKAERTLNTKDTVAYYTESIKNQLSNFLEFENVDNPATMA 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL ++  I  LR+IG  F +N ML+ ++V SRL  E  +SF EF+YMILQ+YDF+ 
Sbjct: 122 NNYDWLGNLDVISFLRDIGKNFGLNYMLAKDTVASRL--ETGISFTEFSYMILQSYDFLN 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGER-LKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           L ++++CRLQ+GGSDQWGNI  G++L  +  +  K + LT PL+T + GTK GKT  GAI
Sbjct: 180 LYQHHNCRLQIGGSDQWGNITAGLELIRKSEEDAKAYGLTIPLVTKSDGTKFGKTEGGAI 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIA 303
           WL+ E T+PY F+Q+W N DD DVV + K  T L   EI  + K   +  E   A+K + 
Sbjct: 240 WLDPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLSHEEILELEKQVAEAPEKRAAQKALG 299

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRGMGLLTLIV 357
            E+T +VHG E  E+A   +   F  S+       I        S +  +    L+ L+V
Sbjct: 300 AEMTKLVHGEEALEQAIKISAALFSGSVAELTASEIEQGFKDVPSVERTAEDTVLIDLLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           ++  + S  +AR  + + AI +N          +  +D        +  GKK + +  
Sbjct: 360 ESKISPSKRQAREDVTNGAIYVNGERTQALDYVVTEKDRIEGKFTIIRRGKKKYFLIR 417


>gi|24380335|ref|NP_722290.1| tyrosyl-tRNA synthetase [Streptococcus mutans UA159]
 gi|24378352|gb|AAN59596.1|AE015022_3 putative tyrosyl-tRNA synthetase [Streptococcus mutans UA159]
          Length = 422

 Score =  498 bits (1284), Expect = e-139,   Method: Composition-based stats.
 Identities = 146/419 (34%), Positives = 223/419 (53%), Gaps = 17/419 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG + Q ++   L      G V+ Y GYD TA SLH GHL  ++++  LQ  G
Sbjct: 7   IFEELKARGLVFQTTDEEALKKSLDDGQVSFYTGYDPTADSLHLGHLVPILVMRHLQLAG 66

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKP +L+GG T +IGDPSF+D+ R +   + ++  ++ I+     FI +  G   A M+N
Sbjct: 67  HKPYALVGGATGLIGDPSFKDDERSLQTKETVKNWVQSIRSQLERFIDFKHGDNKAQMVN 126

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W+  I +ID LR++G +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF  L
Sbjct: 127 NYDWMGKITFIDFLRDVGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFYVL 184

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            + +   LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WL
Sbjct: 185 NQEHAVTLQVGGSDQWGNMTAGTELIRRKANKTAHVITVPLITDATGKKFGKSEGNAVWL 244

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATE 305
           + + TSPY  +Q+W N+ DAD + F K  T L + EI+ +        +E  A+KI+A E
Sbjct: 245 DADKTSPYEMYQFWLNVMDADAIRFLKIFTFLSLDEIEDIRVKFEAAPHERLAQKILAKE 304

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTL 355
           + T VHG+   ++A     + F   I S           ++P  ++     +    ++ L
Sbjct: 305 VVTFVHGQTAYQEAVKITEQLFAGHIKSLSAKELKQGLSNVPNYAVKS---NDNHNIVEL 361

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +V AG   S  +AR  L++ AI IN   I +    +  QD        +  GKK + + 
Sbjct: 362 LVTAGIVNSKRQAREDLQNGAIYINGERIQDLTYNLSQQDKIDNELTVIRRGKKKYFVL 420


>gi|146276975|ref|YP_001167134.1| tyrosyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17025]
 gi|189029761|sp|A4WR15|SYY_RHOS5 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|145555216|gb|ABP69829.1| tyrosyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17025]
          Length = 416

 Score =  498 bits (1284), Expect = e-139,   Method: Composition-based stats.
 Identities = 215/413 (52%), Positives = 280/413 (67%), Gaps = 2/413 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KSDFL ++ ERG++   ++ + LD   S+GVV AYIGYD TA+SLH GHL  +M+L WLQ
Sbjct: 6   KSDFLRVMQERGYLADCTDMQALDEAMSKGVVPAYIGYDATAASLHVGHLLNIMMLRWLQ 65

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           KTGHKPI+LMGGGT+ +GDPSFR E R ++  ++I  NI  +K +F+ ++ Y  G T AL
Sbjct: 66  KTGHKPITLMGGGTTKVGDPSFRSEERPLLTPEKIDANIAGMKQVFARYLDYSDGATGAL 125

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           MLNN  WL S+ Y+D LR+IG  FSVNRMLSFESV+SRL REQSLSFLEFNYMILQAYDF
Sbjct: 126 MLNNAEWLDSLNYLDFLRDIGRHFSVNRMLSFESVKSRLDREQSLSFLEFNYMILQAYDF 185

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL + Y CRLQMGGSDQWGNI+ GIDL  R+   ++F LTSPLLTT+ G KMGK+  GA
Sbjct: 186 LELFRRYGCRLQMGGSDQWGNIVNGIDLTRRVLEGEIFGLTSPLLTTSDGRKMGKSAGGA 245

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WL+ EM +PY+FWQ+WRN  DADV  F K  T LP+ E DR+  LQG EIN AK  +A 
Sbjct: 246 VWLSGEMLAPYDFWQFWRNTTDADVGRFLKLYTELPVEECDRLGALQGAEINGAKIRLAN 305

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E+TT++HGRE AE A   A   F+       +  + I+   +  G+ +   +V AG  TS
Sbjct: 306 EVTTLLHGREAAEAAEATARAVFEQGGVGGALEVVEIAPATLGEGLSVTHFLVAAGLVTS 365

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
             EA+R +  N ++ NN  +S+    +          +K+S G+K H +  L 
Sbjct: 366 GKEAKRLVAENGLRFNNEPVSDANAPVTAAMI--GDELKVSIGRKKHKLVRLA 416


>gi|325693921|gb|EGD35840.1| tyrosine--tRNA ligase [Streptococcus sanguinis SK150]
          Length = 419

 Score =  498 bits (1284), Expect = e-139,   Method: Composition-based stats.
 Identities = 145/416 (34%), Positives = 227/416 (54%), Gaps = 11/416 (2%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L ERG + Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  G
Sbjct: 4   IFDELKERGLVFQTTDEAALRKALEEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAG 63

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKP +L+GG T +IGDPSF+D  R +   + ++  ++ I+   S F+ +  G   A M+N
Sbjct: 64  HKPYALVGGATGLIGDPSFKDAERSLQTKETVEGWVKSIQDQLSRFLDFEKGDNKAEMVN 123

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W  SI +ID LR++G +F+VN M+S +SV+SR+  E  +S+ EF Y I+Q YDF  L
Sbjct: 124 NYDWFSSISFIDFLRDVGKYFTVNYMMSKDSVKSRI--ETGISYTEFAYQIMQGYDFYIL 181

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            +N+   LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WL
Sbjct: 182 NQNHSVTLQIGGSDQWGNMTAGTELLRRKADKTGHVITVPLITDATGKKFGKSEGNAVWL 241

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATE 305
           N + TSPY  +Q+W N+ DAD + F K  T L + EI+ + +      +E  A+K++A E
Sbjct: 242 NPDKTSPYEMYQFWMNVMDADAIRFLKIFTFLSLDEIEEIRQQFEAAPHERLAQKVLARE 301

Query: 306 ITTMVHGREEAEKAATAAMECFDMSI-------HSQHMPTISISKDEVSRGMGLLTLIVK 358
           + ++VHG+E  ++A     + F  +I         Q +  +   + +    + ++ L+V 
Sbjct: 302 VVSLVHGQEAYQEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVQAEDNLNIVELLVT 361

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           AG   S  +AR  +++ AI +N   I +    +   D        +  GKK + + 
Sbjct: 362 AGVVNSKRQAREDVQNGAIYLNGERIQDLDYVLSASDKLEDELTVIRRGKKKYFVL 417


>gi|229118149|ref|ZP_04247508.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus Rock1-3]
 gi|228665372|gb|EEL20855.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus Rock1-3]
          Length = 418

 Score =  498 bits (1284), Expect = e-139,   Method: Composition-based stats.
 Identities = 153/422 (36%), Positives = 229/422 (54%), Gaps = 19/422 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
             L  L  RG I+Q ++   L+ L  +  V  Y G+D TA SLH GH+  +++L   Q  
Sbjct: 2   GILQDLEFRGLINQQTDAEGLEQLLEKESVKLYCGFDPTADSLHIGHMLPVLMLRRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI+L+GGGT +IGDPS +   R +     +    E IK   S+F+++      A M 
Sbjct: 62  GHQPIALVGGGTGMIGDPSGKKAERTLNTKDTVAYYTESIKNQLSNFLEFENVDNPATMA 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL ++  I  LR+IG  F +N ML+ ++V SRL  E  +SF EF+YMILQ+YDF+ 
Sbjct: 122 NNYDWLGNLDVISFLRDIGKNFGLNYMLAKDTVASRL--ETGISFTEFSYMILQSYDFLN 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGER-LKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           L ++++CRLQ+GGSDQWGNI  G++L  +  +  K F LT PL+T + GTK GKT  GAI
Sbjct: 180 LYQHHNCRLQIGGSDQWGNITAGLELIRKSEEDAKAFGLTIPLVTKSDGTKFGKTEGGAI 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIA 303
           WL+ E T+PY F+Q+W N DD DVV + K  T L   EI  + K   +  E   A+K + 
Sbjct: 240 WLDPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLSHEEILELEKQVAEAPEKRAAQKALG 299

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLL 353
           +E+T +VHG E  E+A   +   F  S+            + +P++       +    L+
Sbjct: 300 SEMTKLVHGEEALEQAIKISAALFSGSVAELTANEIEQGFKDVPSVE----RTAEDTVLI 355

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            L+V++  + S  +AR  + + AI +N          +   D        +  GKK + +
Sbjct: 356 DLLVESKISPSKRQAREDVTNGAIYVNGERTQALDYVVTENDRIEGKFTIIRRGKKKYFL 415

Query: 414 CH 415
             
Sbjct: 416 IR 417


>gi|229081915|ref|ZP_04214407.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus Rock4-2]
 gi|229192885|ref|ZP_04319843.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus ATCC 10876]
 gi|228590724|gb|EEK48585.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus ATCC 10876]
 gi|228701503|gb|EEL53997.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus Rock4-2]
          Length = 418

 Score =  498 bits (1284), Expect = e-139,   Method: Composition-based stats.
 Identities = 154/418 (36%), Positives = 226/418 (54%), Gaps = 11/418 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
             L  L  RG I+Q ++   L+ L  +  V  Y G+D TA SLH GH+  +++L   Q  
Sbjct: 2   GILQDLEFRGLINQQTDAEGLEQLLEKESVKLYCGFDPTADSLHIGHMLPVLMLRRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI+L+GGGT +IGDPS +   R +     +    E IK   S+F+++      A M 
Sbjct: 62  GHQPIALVGGGTGMIGDPSGKKAERTLNTKDTVAYYTESIKNQLSNFLEFENVDNPATMA 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL ++  I  LR+IG  F +N ML+ ++V SRL  E  +SF EF+YMILQ+YDF+ 
Sbjct: 122 NNYDWLGNLDVISFLRDIGKNFGLNYMLAKDTVASRL--ETGISFTEFSYMILQSYDFLN 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGER-LKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           L + ++CRLQ+GGSDQWGNI  G++L  +  +  K F LT PL+T + GTK GKT  GAI
Sbjct: 180 LYQQHNCRLQIGGSDQWGNITAGLELIRKSEEDAKAFGLTIPLVTKSDGTKFGKTEGGAI 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIA 303
           WL+ E T+PY F+Q+W N DD DVV + K  T L   EI  + K   +  E   A+K + 
Sbjct: 240 WLDPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLSHEEILELEKQVAEAPEKRAAQKALG 299

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRGMGLLTLIV 357
           +E+T +VHG E  E+A   +   F  S+       I        S +  +    L+ L+V
Sbjct: 300 SEMTKLVHGEEALEQAIKISAALFSGSVAELTASEIEQGFKDVPSVERTAEDTVLIDLLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           ++  + S  +AR  + + AI +N          +   D        +  GKK + +  
Sbjct: 360 ESKISPSKRQAREDVTNGAIYVNGERTQALDYVVTENDRIEGKFTIIRRGKKKYFLIR 417


>gi|182414498|ref|YP_001819564.1| tyrosyl-tRNA synthetase [Opitutus terrae PB90-1]
 gi|254783620|sp|B1ZUZ4|SYY_OPITP RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|177841712|gb|ACB75964.1| tyrosyl-tRNA synthetase [Opitutus terrae PB90-1]
          Length = 425

 Score =  498 bits (1284), Expect = e-139,   Method: Composition-based stats.
 Identities = 148/423 (34%), Positives = 222/423 (52%), Gaps = 13/423 (3%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L  RG     ++   L     QG VT Y G+D TA SLH G+L  L+ L   Q  G
Sbjct: 3   ILDDLQWRGLYADCTDLAALTQRLGQGPVTLYCGFDPTADSLHVGNLVPLLALRRFQLHG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H PI+L GG T ++GDPS R   R ++   ++  NI  IK     F+ +      A M++
Sbjct: 63  HHPIALAGGATGMVGDPSGRSAERNLLTPDQVAHNIASIKQQLGRFLDFDATTNPARMVD 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N TW   I +++ LR++G  FSVN ML+ ESVR+RL+ E  +S+ EF+YM+LQA+DF+ L
Sbjct: 123 NSTWTAPISFLEFLRDVGKHFSVNAMLAKESVRARLESESGISYTEFSYMLLQAHDFLHL 182

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            +  +C LQ+G +DQWGNI  G DL  +      + LT PLLT + GTK GK+ SGA++L
Sbjct: 183 RETMNCELQVGATDQWGNITAGTDLIRKKLGAPAWGLTFPLLTKSDGTKYGKSTSGAVYL 242

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIATE 305
           + + T+PY F+Q++   +DADV+   K LT L   EI  +            A+K +A  
Sbjct: 243 DPKRTTPYRFYQFFVQAEDADVIKLLKVLTFLSAEEITALDTDLKANPGARAAQKALARA 302

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVS-RGMGLLT 354
           +TT+VHG  E   A  A+   F   +              +PT  +   ++S  G  L+ 
Sbjct: 303 VTTLVHGDTECANAIRASEIMFGGGLDGISESLFQDVVGEIPTKELEAAKLSGAGAPLVE 362

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           L+V AG A S  +AR+ +    I +NN+ +      +   +      + L  GK+ + + 
Sbjct: 363 LLVHAGLAPSKGQARKDIDGGGIYVNNARVGEASRAVTTGELLFGKYLLLRKGKRTYTVV 422

Query: 415 HLC 417
            + 
Sbjct: 423 KIV 425


>gi|296505129|ref|YP_003666829.1| tyrosyl-tRNA synthetase [Bacillus thuringiensis BMB171]
 gi|296326181|gb|ADH09109.1| tyrosyl-tRNA synthetase [Bacillus thuringiensis BMB171]
          Length = 418

 Score =  498 bits (1284), Expect = e-139,   Method: Composition-based stats.
 Identities = 155/418 (37%), Positives = 226/418 (54%), Gaps = 11/418 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
             L  L  RG I+Q ++   L+ L  +  V  Y G+D TA SLH GH+  +++L   Q  
Sbjct: 2   GILQDLEFRGLINQQTDAEGLEQLLEKESVKLYCGFDPTADSLHIGHMLPVLMLRRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI+L+GGGT +IGDPS +   R +     +    E IK   S+F+++      A M 
Sbjct: 62  GHQPIALVGGGTGMIGDPSGKKAERTLNTKDTVAYYTESIKNQLSNFLEFENVDNPATMA 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL S+  I  LR+IG  F +N ML+ ++V SRL  E  +SF EF+YMILQ+YDF+ 
Sbjct: 122 NNYDWLGSLDVISFLRDIGKNFGLNYMLAKDTVASRL--ETGISFTEFSYMILQSYDFLN 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGER-LKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           L + ++CRLQ+GGSDQWGNI  G++L  +  +  K F LT PL+T + GTK GKT  GAI
Sbjct: 180 LYQQHNCRLQIGGSDQWGNITAGLELIRKSEEDAKAFGLTIPLVTKSDGTKFGKTEGGAI 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIA 303
           WL+ E T+PY F+Q+W N DD DVV + K  T L   EI  + K   +  E   A+K ++
Sbjct: 240 WLDPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLSHEEILELEKQVAEAPEKRAAQKALS 299

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRGMGLLTLIV 357
            E+T +VHG E  E+A   +   F  S+       I        S +  +    L+ L+V
Sbjct: 300 AEMTKLVHGEEALEQAIKISAALFSGSVAELTASEIEQGFKDVPSVERTAEDTVLIDLLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           ++  + S  +AR  + + AI +N          +   D        +  GKK + +  
Sbjct: 360 ESKISPSKRQAREDVTNGAIYVNGERTQALDYVVTENDRIEGKFTIIRRGKKKYFLIR 417


>gi|288904305|ref|YP_003429526.1| tyrosyl-tRNA synthetase [Streptococcus gallolyticus UCN34]
 gi|306830335|ref|ZP_07463505.1| tyrosine--tRNA ligase [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|325977301|ref|YP_004287017.1| tyrosyl-tRNA synthetase [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
 gi|288731030|emb|CBI12574.1| tyrosyl-tRNA synthetase [Streptococcus gallolyticus UCN34]
 gi|304427360|gb|EFM30462.1| tyrosine--tRNA ligase [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|325177229|emb|CBZ47273.1| tyrS [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069]
          Length = 418

 Score =  498 bits (1284), Expect = e-139,   Method: Composition-based stats.
 Identities = 147/420 (35%), Positives = 227/420 (54%), Gaps = 17/420 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L ERG + Q ++   L    ++G V+ Y GYD TA SLH GHL  ++    LQ  
Sbjct: 2   NIFEELKERGLVFQTTDEEALVKALTEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP +L+GG T +IGDPSF+D  R +   + +   + KI+   S F+ +  G   A+M+
Sbjct: 62  GHKPYALVGGATGLIGDPSFKDAERSLQTKETVDGWVTKIQNQLSRFLDFENGDNKAVMV 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W  ++ +ID LR++G +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF E
Sbjct: 122 NNYDWFGNVSFIDFLRDVGKYFTVNAMMSKESVKKRI--ETGISYTEFAYQIMQGYDFYE 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L   Y+  LQ+GGSDQWGN+  G +L  R        +T PL+T ++G K GK+   A+W
Sbjct: 180 LNDKYNVTLQIGGSDQWGNMTAGTELLRRKADKTGHVMTVPLITDSTGKKFGKSEGNAVW 239

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIAT 304
           L+ + TSPY  +Q+W N+ D D V F K  T L + EI  + K      +E  A+KI+A 
Sbjct: 240 LDADKTSPYEMYQFWLNVMDDDAVRFLKIFTFLSLEEIAEIEKEFNAARHERLAQKILAR 299

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLT 354
           E+ T+VHG E  ++A     + F  +I S           ++P  ++  D+      ++ 
Sbjct: 300 EVVTLVHGEEAYKQALKITEQLFAGNIKSLSAKELKQGLNNVPNYAVQADD---NRNIVE 356

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           ++V A  + S  +AR  +++ AI IN   I +    +   D        +  GKK + + 
Sbjct: 357 VLVAAKISPSKRQAREDVQNGAIYINGERIQDLAYTLSDDDKIDNELTVIRRGKKKYFVL 416


>gi|325688487|gb|EGD30504.1| tyrosine--tRNA ligase [Streptococcus sanguinis SK72]
          Length = 419

 Score =  498 bits (1284), Expect = e-139,   Method: Composition-based stats.
 Identities = 146/416 (35%), Positives = 225/416 (54%), Gaps = 11/416 (2%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L ERG + Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  G
Sbjct: 4   IFDELKERGLVFQTTDEAALRKTLEEGQVSYYSGYDPTADSLHLGHLVAILTSRRLQLAG 63

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKP +L+GG T +IGDPSFRD  R +   + ++  ++ I+   S F+ +  G   A M+N
Sbjct: 64  HKPYALVGGATGLIGDPSFRDAERSLQTKETVEGWVKSIQDQLSRFLDFEKGDNKAEMVN 123

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W  SI +ID LR++G +F+VN M+S +SV+SR+  E  +S+ EF Y I+Q YDF  L
Sbjct: 124 NYDWFSSISFIDFLRDVGKYFTVNYMMSKDSVKSRI--ETGISYTEFAYQIMQGYDFYIL 181

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            +N+   LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WL
Sbjct: 182 NQNHGVTLQIGGSDQWGNMTAGTELLRRKADKTGHVMTVPLITDATGKKFGKSEGNAVWL 241

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATE 305
           N + TSPY  +Q+W N+ DAD + F K  T L + EI+ +        +E  A+K++A E
Sbjct: 242 NPDKTSPYEMYQFWMNVMDADAIRFLKIFTFLSLDEIEEIRHQFEAAPHERLAQKVLARE 301

Query: 306 ITTMVHGREEAEKAATAAMECFDMSI-------HSQHMPTISISKDEVSRGMGLLTLIVK 358
           + ++VHG+E  ++A     + F  +I         Q +  +   + +    + ++ L+V 
Sbjct: 302 VVSLVHGQEAYQEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVQAEDSLNIVELLVT 361

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           AG   S  +AR  +++ AI +N   I +        D        +  GKK + + 
Sbjct: 362 AGVVNSKRQAREDVQNGAIYLNGERIQDLDYVFSSADKLEDELTVIRRGKKKYFVL 417


>gi|110680333|ref|YP_683340.1| tyrosyl-tRNA synthetase, putative [Roseobacter denitrificans OCh
           114]
 gi|122972642|sp|Q164D9|SYY_ROSDO RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|109456449|gb|ABG32654.1| tyrosyl-tRNA synthetase, putative [Roseobacter denitrificans OCh
           114]
          Length = 416

 Score =  498 bits (1284), Expect = e-139,   Method: Composition-based stats.
 Identities = 214/412 (51%), Positives = 287/412 (69%), Gaps = 2/412 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KSDF++++  RGF+   ++ + LD    +GV  AYIG+D TA SLH G L Q+M+L W Q
Sbjct: 6   KSDFMAVMMARGFMADCTDYQGLDEALLKGVQPAYIGFDATAKSLHVGSLIQIMMLRWFQ 65

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           KTGHKP++LMGGGT+ +GDPSFR + R ++  + I +NI  IK +FS++I Y    T AL
Sbjct: 66  KTGHKPLTLMGGGTTKVGDPSFRADERPLLGPEAIDDNIAGIKQVFSAYIDYSDAPTGAL 125

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           MLNN  WL ++ Y+D LR+IG  FS+NRMLSFESV+SRL REQSLSFLEFNYMILQAYDF
Sbjct: 126 MLNNAEWLDNLNYLDFLRDIGRHFSINRMLSFESVKSRLDREQSLSFLEFNYMILQAYDF 185

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL + Y C LQ+GGSDQWGNI+ GIDL  R+   +++ LTSPLLTT+ G KMGK+ SGA
Sbjct: 186 MELYRRYGCILQLGGSDQWGNIVNGIDLTRRVIDGEVYGLTSPLLTTSDGKKMGKSQSGA 245

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WLN +M SPY FWQ+WRN  DADV  F K  T LP+ E +R+  L G EIN AK  +A 
Sbjct: 246 VWLNADMFSPYEFWQFWRNTTDADVGRFLKLYTELPLDECERLGALAGSEINAAKITLAN 305

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E+TT++HG E A  AA  A + F+       +PT+++S ++V++G+ ++ LIVK+G A S
Sbjct: 306 EVTTLLHGAEAAATAAQTARDVFEKGGVGDDLPTLTLSAEDVAQGISIVQLIVKSGLANS 365

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             EA+R +  N  K++++ ++N  L I      S   IKLS GKK H +  L
Sbjct: 366 GKEAKRLIAENGAKMDDAPLTNAGLMIDAAALQSP--IKLSAGKKRHAMVQL 415


>gi|150019425|ref|YP_001311679.1| tyrosyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052]
 gi|254783582|sp|A6M293|SYY_CLOB8 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|149905890|gb|ABR36723.1| tyrosyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052]
          Length = 406

 Score =  498 bits (1284), Expect = e-139,   Method: Composition-based stats.
 Identities = 177/411 (43%), Positives = 259/411 (63%), Gaps = 7/411 (1%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           ++ L  L ERG+I Q ++  E   L     +T YIG+D TA SLH GH   +M +  +Q+
Sbjct: 2   ANVLDELLERGYIKQFTHEEETRKLLENEKITFYIGFDPTADSLHVGHFIAMMFMAHMQR 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+PI+L+GGGT+++GDPS + + R+M+  ++IQ N++ IK     FI +  GK  A++
Sbjct: 62  AGHRPIALIGGGTAMVGDPSGKTDMRKMLTKEDIQHNVDSIKKQMERFIDFSDGK--AIL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
            NN  WL ++ Y+D LRE+G  FSVNRML+ E  + RL  E+ LSFLEFNYM++Q YDF 
Sbjct: 120 ANNADWLLNLNYVDFLREVGVHFSVNRMLTAECFKQRL--EKGLSFLEFNYMLMQGYDFY 177

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           EL + Y+C++Q+GG DQW N+I G++L  R    +  A+T  LLT + G KMGKT+ GA+
Sbjct: 178 ELNQKYNCKMQLGGDDQWSNMIAGVELVRRKAQGEAMAMTCTLLTNSQGQKMGKTVGGAL 237

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
           WL+   TSPY+F+QYWRN+DDADV      LT LPM E+ R+  L+G EIN AKK++A E
Sbjct: 238 WLDPAKTSPYDFYQYWRNVDDADVEKCLALLTFLPMDEVRRLGALEGAEINGAKKVLAYE 297

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           IT +VHG EEA+KA  AA   F       ++PT++I+K+E+  G+ +L ++       S 
Sbjct: 298 ITKLVHGEEEAKKAEEAATALFAGGADMSNVPTVTIAKEEI--GLPILDVMASTKIIPSK 355

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            E RR ++   + IN   +      +  +DF   G + +  GKKN+    +
Sbjct: 356 KEGRRLIEQGGLSINGVKVEGVNRILTEEDF-QDGAVLIKRGKKNYNKIEI 405


>gi|52786843|ref|YP_092672.1| tyrosyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|163119602|ref|YP_080258.2| tyrosyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|319647372|ref|ZP_08001594.1| tyrosyl-tRNA synthetase 1 [Bacillus sp. BT1B_CT2]
 gi|52349345|gb|AAU41979.1| TyrS [Bacillus licheniformis ATCC 14580]
 gi|145903112|gb|AAU24620.2| tyrosyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|317390719|gb|EFV71524.1| tyrosyl-tRNA synthetase 1 [Bacillus sp. BT1B_CT2]
          Length = 422

 Score =  498 bits (1284), Expect = e-139,   Method: Composition-based stats.
 Identities = 153/417 (36%), Positives = 234/417 (56%), Gaps = 12/417 (2%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  LS RG I Q ++   L  L  +  ++ Y G+D TA SLH GHL  +++L   Q  G
Sbjct: 5   ILDDLSFRGLIQQQTDEAGLRELLDKEKISLYSGFDPTADSLHIGHLLPILMLRRFQLAG 64

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+PI+L+GG T +IGDPS +   R +   + ++E  +KIK   S F+ +   +  A+M N
Sbjct: 65  HRPIALVGGATGLIGDPSGKKAERTLNNEEIVREWSQKIKNQLSRFLDFEAEENPAIMAN 124

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W+  +  ID LR++G  F +N ML+ ++V SR+  E  +S+ EF+YMILQ+ DF+ L
Sbjct: 125 NYDWIGKMNVIDFLRDVGKNFGINYMLAKDTVSSRI--ETGISYTEFSYMILQSLDFLNL 182

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGER-LKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
            +N +C+LQ+GGSDQWGNI  G++L  +  +  K F LT PL+T A GTK GKT  GAIW
Sbjct: 183 YRNQECKLQIGGSDQWGNITSGLELIRKSEENAKAFGLTIPLVTKADGTKFGKTEGGAIW 242

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIAT 304
           L+KE TS Y F+Q+W N DD DVV + K  T L   EI+ +A+      E  EA+K +A 
Sbjct: 243 LDKEKTSAYEFYQFWINTDDRDVVKYLKYFTFLSKEEIEDLAEKTETAPEKREAQKRLAE 302

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISIS-------KDEVSRGMGLLTLIV 357
           E+T +VHGRE  E+A   +   F   I       + +        + E +  + L+ ++V
Sbjct: 303 EVTVLVHGREAFEQAVNISKALFSGDIKQLTAEEVKVGFKGVPSLEVEKADELPLVEILV 362

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           ++  + S  +AR  + + A+ +N    ++    +   D        +  GKK + + 
Sbjct: 363 QSKLSPSKRQAREDITNGAVYVNGERRTDVADVLTADDRIEGQFTVIRRGKKKYFLL 419


>gi|221638906|ref|YP_002525168.1| Tyrosyl-tRNA synthetase [Rhodobacter sphaeroides KD131]
 gi|254783626|sp|B9KQU0|SYY_RHOSK RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|221159687|gb|ACM00667.1| Tyrosyl-tRNA synthetase [Rhodobacter sphaeroides KD131]
          Length = 416

 Score =  498 bits (1284), Expect = e-139,   Method: Composition-based stats.
 Identities = 213/413 (51%), Positives = 280/413 (67%), Gaps = 2/413 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KSDFL ++ ERG++   ++ + LD   S+GVV AYIGYD TA+SLH GHL  +M+L WLQ
Sbjct: 6   KSDFLRVMQERGYLADCTDKQALDEALSKGVVPAYIGYDATAASLHVGHLLNIMMLRWLQ 65

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           KTGHKPI+LMGGGT+ +GDPSFR E R ++   +I ENIE ++ +F+ ++ YG G TDAL
Sbjct: 66  KTGHKPITLMGGGTTKVGDPSFRSEERPLLTPDKIDENIEGMRKVFARYLSYGEGATDAL 125

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           MLNN  WL  + Y+D LR+IG  FSVNRMLSFESV+SRL REQSLSFLEFNYMILQAYDF
Sbjct: 126 MLNNAEWLDHLNYLDFLRDIGRHFSVNRMLSFESVKSRLDREQSLSFLEFNYMILQAYDF 185

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL + Y CRLQMGGSDQWGNI+ GIDL  R+   ++F LTSPLLTT+ G KMGK+  GA
Sbjct: 186 LELFRRYGCRLQMGGSDQWGNIVNGIDLTRRVLEGEIFGLTSPLLTTSDGRKMGKSAGGA 245

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WLN EM +PY+FWQ+WRN  DADV  F K  T LP+ E DR+  LQG EIN AK ++A 
Sbjct: 246 VWLNGEMLAPYDFWQFWRNTTDADVGRFLKLYTELPVEECDRLGALQGSEINAAKILLAN 305

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E+TT++HGR+ AE A   A   F+       +  + +    +  G+ +   +V AG   S
Sbjct: 306 EVTTLLHGRDAAEAAEATARAVFEEGGVGGALEVVELPATTLGEGLSVAHFLVAAGLVAS 365

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
             EA+R +  + ++ NN  + +    +          +K+S G+K H +  L 
Sbjct: 366 GKEAKRLVAESGLRFNNEPVGDANAPVTAA--TVGEELKVSIGRKKHKLVRLS 416


>gi|148998105|ref|ZP_01825618.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae SP11-BS70]
 gi|225859855|ref|YP_002741365.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae 70585]
 gi|307068712|ref|YP_003877678.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae AP200]
 gi|254783642|sp|C1CAS7|SYY_STRP7 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|147756115|gb|EDK63158.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae SP11-BS70]
 gi|225721708|gb|ACO17562.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae 70585]
 gi|306410249|gb|ADM85676.1| Tyrosyl-tRNA synthetase [Streptococcus pneumoniae AP200]
          Length = 418

 Score =  498 bits (1284), Expect = e-139,   Method: Composition-based stats.
 Identities = 151/419 (36%), Positives = 229/419 (54%), Gaps = 17/419 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L +RG I Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  G
Sbjct: 3   IFDELKDRGLIFQTTDEEALRKALEEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKP +L+GG T +IGDPSF+D  R +     +   ++ I+G  S F+ +  G+  A+M+N
Sbjct: 63  HKPYALVGGATGLIGDPSFKDAERSLQTKDTVDGWVKSIQGQLSRFLDFENGENKAVMVN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W  SI +ID LR+IG +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF  L
Sbjct: 123 NYDWFGSISFIDFLRDIGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFFVL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            ++++  LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WL
Sbjct: 181 NQDHNVTLQIGGSDQWGNMTAGTELLRRKADKTGHVITVPLITDATGKKFGKSEGNAVWL 240

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATE 305
           N E TSPY  +Q+W N+ DAD V F K  T L + EI+ + K      +E  A+K++A E
Sbjct: 241 NPEKTSPYEMYQFWMNVMDADAVRFLKIFTFLSLDEIEDIRKQFEAAPHERLAQKVLARE 300

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTL 355
           + T+VHG E  ++A     + F  +I +          + +P   +  DE +    ++ L
Sbjct: 301 VVTLVHGEEAYKEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVQADEHN---NIVEL 357

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +V +G   S  +AR  +++ AI +N   I +    +   D        +  GKK + + 
Sbjct: 358 LVSSGIVNSKRQAREDVQNGAIYVNGDRIQDLDYVLSDADKLENELTVIRRGKKKYFVL 416


>gi|89100096|ref|ZP_01172965.1| tyrosyl-tRNA synthetase [Bacillus sp. NRRL B-14911]
 gi|89085186|gb|EAR64318.1| tyrosyl-tRNA synthetase [Bacillus sp. NRRL B-14911]
          Length = 418

 Score =  498 bits (1284), Expect = e-139,   Method: Composition-based stats.
 Identities = 142/422 (33%), Positives = 228/422 (54%), Gaps = 21/422 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L  RG ++Q ++    + L  +  ++ Y G D TA S+H GHL   + L   Q  G
Sbjct: 3   LLEDLKWRGIVYQQTDEEGTEELLKKEKISLYCGIDPTADSMHIGHLLPFLTLRRFQNEG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+PI L+GG T +IGDPS + E R++   + IQ N+  I+        +  G+  ALM+N
Sbjct: 63  HRPIVLVGGATGLIGDPSGKSEERKLQTLEAIQHNVSSIQKQLKKIFSF-EGENGALMVN 121

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W  S+  +  LR+ G    VN ML+ +++ SRL  +  +SF EF Y ILQA DF+ L
Sbjct: 122 NYDWAGSMDIVTFLRDYGKHVGVNYMLAKDTIASRL--DTGISFTEFTYTILQAMDFLHL 179

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERL--KTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            + ++C++Q+GGSDQWGNI  G++L  ++  +  K + +T PL+T A GTK GKT SGAI
Sbjct: 180 YEKHNCKMQIGGSDQWGNITTGLELIRKMMPEGAKGYGVTIPLVTKADGTKFGKTESGAI 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIA 303
           WL+ E TSPY F+Q+W N  DADV+ + K  T LP  EI+ +     +   + +A+K +A
Sbjct: 240 WLDPEKTSPYEFYQFWINTADADVIKYLKYFTFLPKEEIEALENSLAEEAHLRKAQKALA 299

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLL 353
            E+T ++HG    E+A   +   F   + +          + +P+   + +E     G++
Sbjct: 300 EEMTKLIHGEAALEQAIKISAALFSGDVKNLTASEITQGFKDVPSYEPTGEEN----GIV 355

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            L+  A  + S  +AR  + + A+ +N   I+    ++  +D        +  GKK + +
Sbjct: 356 DLLTAAKISPSKRQAREDVSNGAVYVNGERITATDYELTEKDRIEGQFTIIRRGKKKYFL 415

Query: 414 CH 415
             
Sbjct: 416 IR 417


>gi|75760723|ref|ZP_00740746.1| Tyrosyl-tRNA synthetase [Bacillus thuringiensis serovar israelensis
           ATCC 35646]
 gi|206969502|ref|ZP_03230456.1| tyrosyl-tRNA synthetase [Bacillus cereus AH1134]
 gi|218234669|ref|YP_002369456.1| tyrosyl-tRNA synthetase [Bacillus cereus B4264]
 gi|218899815|ref|YP_002448226.1| tyrosyl-tRNA synthetase [Bacillus cereus G9842]
 gi|228903177|ref|ZP_04067311.1| Tyrosyl-tRNA synthetase 1 [Bacillus thuringiensis IBL 4222]
 gi|228923415|ref|ZP_04086702.1| Tyrosyl-tRNA synthetase 1 [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228954932|ref|ZP_04116950.1| Tyrosyl-tRNA synthetase 1 [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|228960931|ref|ZP_04122564.1| Tyrosyl-tRNA synthetase 1 [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|229072165|ref|ZP_04205373.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus F65185]
 gi|229180981|ref|ZP_04308316.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus 172560W]
 gi|74491778|gb|EAO54971.1| Tyrosyl-tRNA synthetase [Bacillus thuringiensis serovar israelensis
           ATCC 35646]
 gi|206735190|gb|EDZ52358.1| tyrosyl-tRNA synthetase [Bacillus cereus AH1134]
 gi|218162626|gb|ACK62618.1| tyrosine--tRNA ligase [Bacillus cereus B4264]
 gi|218542348|gb|ACK94742.1| tyrosyl-tRNA synthetase [Bacillus cereus G9842]
 gi|228602538|gb|EEK60024.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus 172560W]
 gi|228710903|gb|EEL62870.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus F65185]
 gi|228798827|gb|EEM45807.1| Tyrosyl-tRNA synthetase 1 [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|228804753|gb|EEM51354.1| Tyrosyl-tRNA synthetase 1 [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|228836236|gb|EEM81590.1| Tyrosyl-tRNA synthetase 1 [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228856459|gb|EEN00985.1| Tyrosyl-tRNA synthetase 1 [Bacillus thuringiensis IBL 4222]
          Length = 418

 Score =  498 bits (1284), Expect = e-139,   Method: Composition-based stats.
 Identities = 155/418 (37%), Positives = 226/418 (54%), Gaps = 11/418 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
             L  L  RG I+Q ++   L+ L  +  V  Y G+D TA SLH GH+  +++L   Q  
Sbjct: 2   GILQDLEFRGLINQQTDAEGLEQLLEKESVKLYCGFDPTADSLHIGHMLPVLMLRRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI+L+GGGT +IGDPS +   R +     +    E IK   S+F+++      A M 
Sbjct: 62  GHQPIALVGGGTGMIGDPSGKKAERTLNTKDTVAYYTESIKNQLSNFLEFENVDNPATMA 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL S+  I  LR+IG  F +N ML+ ++V SRL  E  +SF EF+YMILQ+YDF+ 
Sbjct: 122 NNYDWLGSLDVISFLRDIGKNFGLNYMLAKDTVASRL--ETGISFTEFSYMILQSYDFLN 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGER-LKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           L + ++CRLQ+GGSDQWGNI  G++L  +  +  K F LT PL+T + GTK GKT  GAI
Sbjct: 180 LYQQHNCRLQIGGSDQWGNITAGLELIRKSEEDAKAFGLTIPLVTKSDGTKFGKTEGGAI 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIA 303
           WL+ E T+PY F+Q+W N DD DVV + K  T L   EI  + K   +  E   A+K + 
Sbjct: 240 WLDPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLSHEEILELEKQVAEAPEKRAAQKALG 299

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRGMGLLTLIV 357
           +E+T +VHG E  E+A   +   F  S+       I        S +  +    L+ L+V
Sbjct: 300 SEMTKLVHGEEALEQAIKISAALFSGSVAELTASEIEQGFKDVPSVERTAEDTVLIDLLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           ++  + S  +AR  + + AI +N          +   D        +  GKK + +  
Sbjct: 360 ESKISPSKRQAREDVTNGAIYVNGERTQALDYVVTENDRIEGKFTIIRRGKKKYFLIR 417


>gi|229105287|ref|ZP_04235936.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus Rock3-28]
 gi|228678213|gb|EEL32441.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus Rock3-28]
          Length = 418

 Score =  498 bits (1283), Expect = e-139,   Method: Composition-based stats.
 Identities = 153/422 (36%), Positives = 229/422 (54%), Gaps = 19/422 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
             L  L  RG I+Q ++   L+ L  +  V  Y G+D TA SLH GH+  +++L   Q  
Sbjct: 2   GILQDLEFRGLINQQTDAEGLEQLLEKESVKLYCGFDPTADSLHIGHMLPVLMLRRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI+L+GGGT +IGDPS +   R +     +    E IK   S+F+++      A M 
Sbjct: 62  GHQPIALVGGGTGMIGDPSGKKAERTLNTKDTVAYYTESIKNQLSNFLEFENVDNPATMA 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL ++  I  LR+IG  F +N ML+ ++V SRL  +  +SF EF+YMILQ+YDF+ 
Sbjct: 122 NNYDWLGNLDVISFLRDIGKNFGLNYMLAKDTVASRL--DTGISFTEFSYMILQSYDFLN 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGER-LKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           L +N++CRLQ+GGSDQWGNI  G++L  +  +  K F LT PL+T + GTK GKT  GAI
Sbjct: 180 LYQNHNCRLQIGGSDQWGNITAGLELIRKSEEDAKAFGLTIPLVTKSDGTKFGKTEGGAI 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIA 303
           WL+ E T+PY F+Q+W N DD DVV + K  T L   EI  + K   +  E   A+K + 
Sbjct: 240 WLDPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLSHEEILELEKQVAEAPEKRAAQKALG 299

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLL 353
           +E+T +VHG E  E+A   +   F  S+            + +P++       +    L+
Sbjct: 300 SEMTKLVHGEEALEQAIKISAALFSGSVAELTANEIEQGFKDVPSVE----RTAEDTVLI 355

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            L+V++  + S  +AR  + + AI +N          +   D        +  GKK + +
Sbjct: 356 DLLVESKISPSKRQAREDVTNGAIYVNGERTQALDYVVTENDRIEGKFTIIRRGKKKYFL 415

Query: 414 CH 415
             
Sbjct: 416 IR 417


>gi|89070003|ref|ZP_01157335.1| tyrosyl-tRNA synthetase [Oceanicola granulosus HTCC2516]
 gi|89044451|gb|EAR50582.1| tyrosyl-tRNA synthetase [Oceanicola granulosus HTCC2516]
          Length = 416

 Score =  498 bits (1283), Expect = e-139,   Method: Composition-based stats.
 Identities = 214/412 (51%), Positives = 286/412 (69%), Gaps = 2/412 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KS+F++ + ERGF+   ++ + LD   S+GVVTAYIGYD TA SLH GHL  +MLL WLQ
Sbjct: 6   KSEFMARIMERGFLADCTDYQSLDEELSKGVVTAYIGYDATARSLHVGHLLNIMLLRWLQ 65

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           KTGH+PI+LMGGGT+ +GDPSFR + R ++  ++I  NI  ++ +F  ++ YG G T A 
Sbjct: 66  KTGHQPITLMGGGTTKVGDPSFRADERPLLGPEQIDANIAGMQAVFERYLDYGEGATGAK 125

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           MLNN  WL  + Y+D LR+IG  FSVNRMLSFESV+SRL REQSLSFLEFNYMILQAYDF
Sbjct: 126 MLNNAEWLDGLNYLDFLRDIGRHFSVNRMLSFESVKSRLDREQSLSFLEFNYMILQAYDF 185

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL + + C LQMGGSDQWGNI+ G+DL  R+   +++ LT+PLLTT+ G KMGK+  GA
Sbjct: 186 LELNRRHGCLLQMGGSDQWGNIVNGVDLTRRVLDREIYGLTTPLLTTSDGRKMGKSQGGA 245

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WLN +M SPY FWQ+WRN  DAD   F K  T LP+ E +R+  L G EINEAK ++A 
Sbjct: 246 VWLNADMLSPYEFWQFWRNTTDADTGRFLKLYTELPLEECERLGALGGAEINEAKIVLAN 305

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E+T ++HGRE A  A   A E F+       +PT+++S DE + G+ ++ LIV+AG A S
Sbjct: 306 EVTALLHGREAAATAEATAREVFEKGGVGGDLPTLTLSADEAAGGVSVVQLIVRAGLAGS 365

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             EA+R +  N  ++++  +++  L I  +   S   IKLS GKK H +  L
Sbjct: 366 GKEAKRLIADNGARLDDRPLTDAGLVIGTEQLASP--IKLSAGKKRHALVQL 415


>gi|311031298|ref|ZP_07709388.1| tyrosyl-tRNA synthetase [Bacillus sp. m3-13]
          Length = 419

 Score =  498 bits (1283), Expect = e-139,   Method: Composition-based stats.
 Identities = 154/421 (36%), Positives = 229/421 (54%), Gaps = 18/421 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L  RG ++Q+++   L  L S+  V  Y G+D T  SLH GHL  ++ L   Q+ G
Sbjct: 3   LLEDLQFRGLVNQVTDEEGLTKLLSEEKVKLYSGFDPTGDSLHIGHLLPILTLRRFQQAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H PI+L+GG T +IGDPS +   R +  S  + E   +IKG  S F+ +   +  A++ N
Sbjct: 63  HHPIALVGGATGLIGDPSGKKAERTLNTSDIVVEWSNRIKGQLSQFLDFTAAENPAVIAN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W+  +  I  LR++G  F +N ML+ +SV+SR++    +S+ EF+YMILQ+ DF+ L
Sbjct: 123 NHDWIGEMNVISFLRDVGKNFGLNYMLAKDSVQSRIES--GISYTEFSYMILQSLDFLHL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGER-LKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
            +  +C+LQ+GGSDQWGNI  G++L  +  +  K F LT PL+T A GTK GKT  GAIW
Sbjct: 181 YRGQNCKLQIGGSDQWGNITAGMELIRKSEENAKAFGLTIPLVTKADGTKFGKTEGGAIW 240

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIAT 304
           L++E TSPY F+Q+W N DD DVV + K  T L  SEI  + K   +  E   A K +A 
Sbjct: 241 LDREKTSPYEFYQFWINTDDRDVVKYLKFFTFLSHSEILELEKELQEAPEKRSAHKRLAE 300

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLT 354
           E+T +VHG    E+A   +   F  SI              +P+ ++   E    + L+ 
Sbjct: 301 EVTKLVHGEAALEQAIRISKALFSGSISELSADEIKQGFADVPSFTV---ENEEQLALVE 357

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           L+V +  A S  +AR  + + AI IN   + +    +   D        +  GKK + + 
Sbjct: 358 LLVASKIAPSKRQAREDITNGAISINGEKVQDLAYVLGESDRIEGQFTVVRRGKKKYFLI 417

Query: 415 H 415
            
Sbjct: 418 K 418


>gi|327467040|gb|EGF12554.1| tyrosine--tRNA ligase [Streptococcus sanguinis SK330]
          Length = 419

 Score =  498 bits (1283), Expect = e-139,   Method: Composition-based stats.
 Identities = 145/416 (34%), Positives = 228/416 (54%), Gaps = 11/416 (2%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L ERG + Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  G
Sbjct: 4   IFDELKERGLVFQTTDEAALRKALEEGQVSYYSGYDPTADSLHLGHLVAILTSRRLQLAG 63

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKP +L+GG T +IGDPSF+D  R +   + ++  ++ I+   S F+ +  G   A M+N
Sbjct: 64  HKPYALVGGATGLIGDPSFKDAERSLQTKETVEGWVKSIQDQLSRFLDFEKGDNKAEMVN 123

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W  SI +ID LR++G +F+VN M+S +SV+SR+  E  +S+ EF Y I+Q YDF  L
Sbjct: 124 NYDWFSSISFIDFLRDVGKYFTVNYMMSKDSVKSRI--ETGISYTEFAYQIMQGYDFYIL 181

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            +N+   LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WL
Sbjct: 182 NQNHGVTLQIGGSDQWGNMTAGTELLRRKADKTGHVITVPLITDATGKKFGKSEGNAVWL 241

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATE 305
           N + TSPY  +Q+W N+ DAD + F K  T L + EI+ + +      +E  A+K++A E
Sbjct: 242 NPDKTSPYEMYQFWMNVMDADAIRFLKIFTFLTLDEIEEIRQQFEAAPHERLAQKVLARE 301

Query: 306 ITTMVHGREEAEKAATAAMECFDMSI-------HSQHMPTISISKDEVSRGMGLLTLIVK 358
           + ++VHG+E  ++A     + F  +I         Q +  +   + +    + ++ L+V 
Sbjct: 302 VVSLVHGQEAYQEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVQAEDNLNIVELLVT 361

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           AG   S  +AR  +++ AI +N   I +    + + D        +  GKK + + 
Sbjct: 362 AGVVNSKRQAREDVQNGAIYLNGERIQDLDYVLNVSDKLEDELTVIRRGKKKYFVL 417


>gi|228910512|ref|ZP_04074326.1| Tyrosyl-tRNA synthetase 1 [Bacillus thuringiensis IBL 200]
 gi|229152861|ref|ZP_04281044.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus m1550]
 gi|228630681|gb|EEK87327.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus m1550]
 gi|228849076|gb|EEM93916.1| Tyrosyl-tRNA synthetase 1 [Bacillus thuringiensis IBL 200]
          Length = 418

 Score =  498 bits (1283), Expect = e-139,   Method: Composition-based stats.
 Identities = 155/418 (37%), Positives = 225/418 (53%), Gaps = 11/418 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
             L  L  RG I+Q ++   L+ L  +  V  Y G+D TA SLH GH+  +++L   Q  
Sbjct: 2   GILQDLEFRGLINQQTDAEGLEQLLEKESVKLYCGFDPTADSLHIGHMLPVLMLRRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI+L+GGGT +IGDPS +   R +     +    E IK   S+F+++      A M 
Sbjct: 62  GHQPIALVGGGTGMIGDPSGKKAERTLNTKDTVAYYTESIKNQLSNFLEFENVDNPATMA 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL S+  I  LR+IG  F +N ML+ ++V SRL  E  +SF EF+YMILQ+YDF+ 
Sbjct: 122 NNYDWLGSLDVISFLRDIGKNFGLNYMLAKDTVASRL--ETGISFTEFSYMILQSYDFLN 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGER-LKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           L + ++CRLQ+GGSDQWGNI  G++L  +  +  K F LT PL+T + GTK GKT  GAI
Sbjct: 180 LYQQHNCRLQIGGSDQWGNITAGLELIRKSEEDAKAFGLTIPLVTKSDGTKFGKTEGGAI 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIA 303
           WL+ E T+PY F+Q+W N DD DVV + K  T L   EI  + K   +  E   A+K + 
Sbjct: 240 WLDPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLSHEEILELEKQVAEAPEKRAAQKALG 299

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRGMGLLTLIV 357
            E+T +VHG E  E+A   +   F  S+       I        S +  +    L+ L+V
Sbjct: 300 AEMTKLVHGEEALEQAIKISAALFSGSVAELTASEIEQGFKDVPSVERTAEDTVLIDLLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           ++  + S  +AR  + + AI +N          +   D        +  GKK + +  
Sbjct: 360 ESKISPSKRQAREDVTNGAIYVNGERTQALDYVVTENDRIEGKFTIIRRGKKKYFLIR 417


>gi|312139861|ref|YP_004007197.1| tyrosine-tRNA ligase tyrs [Rhodococcus equi 103S]
 gi|311889200|emb|CBH48514.1| tyrosine-tRNA ligase TyrS [Rhodococcus equi 103S]
          Length = 425

 Score =  498 bits (1283), Expect = e-139,   Method: Composition-based stats.
 Identities = 152/421 (36%), Positives = 231/421 (54%), Gaps = 13/421 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + L  L+ RG I Q ++   L      G VT Y G+D T  SLHAGHL  L+ L   Q+ 
Sbjct: 4   NILDELTWRGLIAQSTDLDALRRETEAGPVTLYAGFDPTGPSLHAGHLVPLLALKRFQRA 63

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI L GG T +IGDP    E R M  +  + +  ++I+     F+ +    T A++ 
Sbjct: 64  GHRPIVLAGGATGMIGDPRDVGE-RVMNTADTVADWADRIRSQLERFVDFDESPTGAVIE 122

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   +  ID LR+IG  FSVN ML+ ++V+ RL+ +  +S+ EF+YM+LQA DFV 
Sbjct: 123 NNANWTSKLTAIDFLRDIGKHFSVNVMLARDTVKRRLETD-GISYTEFSYMLLQANDFVH 181

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT-LSGAI 245
           L +NY C LQ+GGSDQWGNII G+DL  +L    + A+T PL+T+A G K GK+   G++
Sbjct: 182 LRRNYGCTLQVGGSDQWGNIIAGVDLNRKLDGESVHAMTVPLVTSADGKKFGKSTGGGSL 241

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIA 303
           WL+ EMTSPY ++QY+ N  DADVV + +  T L   E+    +A  +  +  EA++ +A
Sbjct: 242 WLDPEMTSPYAWYQYFVNTGDADVVKYLRWFTFLTQEELAELEVATAERPQAREAQRRLA 301

Query: 304 TEITTMVHGREEAEKAATAAMECF--------DMSIHSQHMPTISISKDEVSRGMGLLTL 355
            E+TT+VHG+   +    A+   F        D S  +  +   SI++        ++ L
Sbjct: 302 AEMTTLVHGQANTDAVELASKALFGRAELTDLDESTLAAALKEASIAEVAGDAPRTIVDL 361

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +V +G + S   ARR +K     +NN  + ++    +  D      + +  G+KN     
Sbjct: 362 LVASGLSESKGAARRAVKEGGAYVNNQRVESDDWTPESSDLLHGRWLVIRRGRKNFAGIK 421

Query: 416 L 416
           +
Sbjct: 422 V 422


>gi|322392516|ref|ZP_08065976.1| tyrosine--tRNA ligase [Streptococcus peroris ATCC 700780]
 gi|321144508|gb|EFX39909.1| tyrosine--tRNA ligase [Streptococcus peroris ATCC 700780]
          Length = 418

 Score =  498 bits (1283), Expect = e-139,   Method: Composition-based stats.
 Identities = 153/419 (36%), Positives = 227/419 (54%), Gaps = 17/419 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L ERG I Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  G
Sbjct: 3   IFDELKERGLIFQTTDEEALRKSLEEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKP +L+GG T +IGDPSF+D  R +     +   ++ I+G  S F+ +  G+  A+M+N
Sbjct: 63  HKPYALVGGATGLIGDPSFKDAERSLQTKDTVDGWVKSIQGQLSRFLDFENGENKAVMVN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W  SI +ID LR+IG +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF  L
Sbjct: 123 NYDWFGSISFIDFLRDIGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFFVL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            + ++  LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WL
Sbjct: 181 NQEHNVTLQIGGSDQWGNMTAGTELLRRKADKTGHVITVPLITDATGKKFGKSEGNAVWL 240

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATE 305
           N E TSPY  +Q+W N+ DAD V F K  T L + EI+ + K      +E  A+K++A E
Sbjct: 241 NPEKTSPYEMYQFWMNVMDADAVRFLKIFTFLSLDEIEDIRKQFEAAPHERLAQKVLARE 300

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTL 355
           + T+VHG E  ++A     + F  +I +          + +P   +  DE      ++ L
Sbjct: 301 VVTLVHGEEAYKEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVQADE---NHNIVEL 357

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +V +G   S  +AR  +++ AI IN   I +    +   D        +  GKK + + 
Sbjct: 358 LVSSGVVNSKRQAREDIQNGAIYINGDRIQDLDYILSDADKLENELTVIRRGKKKYFVL 416


>gi|119384647|ref|YP_915703.1| tyrosyl-tRNA synthetase [Paracoccus denitrificans PD1222]
 gi|189083666|sp|A1B3B3|SYY_PARDP RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|119374414|gb|ABL70007.1| tyrosyl-tRNA synthetase [Paracoccus denitrificans PD1222]
          Length = 414

 Score =  498 bits (1283), Expect = e-139,   Method: Composition-based stats.
 Identities = 209/412 (50%), Positives = 280/412 (67%), Gaps = 4/412 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KSDFL+++ ERG++   ++ + LD     G VTAYIGYD TA+SLH GHL  +M+L W Q
Sbjct: 6   KSDFLNVMIERGYLADCTDMQALDDALIDGPVTAYIGYDATAASLHVGHLLNIMMLRWFQ 65

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           KTG++PI+LMGGGT+ +GDPSFR E R ++   +I ENI  +K +F+ ++ YG     A+
Sbjct: 66  KTGNRPITLMGGGTTKVGDPSFRSEERPLLTPDKIDENIAGMKQVFARYLDYGDQ--GAM 123

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           MLNN  WL S+ Y+D LR+IG  FSVNRMLSFESV+SRL REQSLSFLEFNYMILQAYDF
Sbjct: 124 MLNNAEWLDSLNYLDFLRDIGRHFSVNRMLSFESVKSRLDREQSLSFLEFNYMILQAYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL + Y CRLQMGGSDQWGNI+ GIDL  R+   +++ LTSPLLTT+ G KMGK+  GA
Sbjct: 184 LELYRRYGCRLQMGGSDQWGNIVNGIDLTRRVLDAEIWGLTSPLLTTSDGRKMGKSAGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WLN  M SPY FWQ+WRN  DADV  F K  T LP+ E DR+  L G EIN AK I+A 
Sbjct: 244 VWLNGAMLSPYEFWQFWRNTTDADVGRFLKLYTELPVEECDRLGALSGSEINAAKIILAN 303

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E+TT++HG + A  A   A E F+       +  +++S D ++ G+ ++ L+ + G   S
Sbjct: 304 EVTTLLHGADAAASAEATAREVFEQGGAGGDLEVVTLSADALASGLTVVQLLAQTGITAS 363

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             EA+R +    +++NN  +S+ +L +        G +K+S GKK H +  L
Sbjct: 364 GKEAKRLIAEGGLRLNNEAVSDPQLAVDAA-LIGDG-LKVSVGKKKHRMVQL 413


>gi|229543517|ref|ZP_04432577.1| tyrosyl-tRNA synthetase [Bacillus coagulans 36D1]
 gi|229327937|gb|EEN93612.1| tyrosyl-tRNA synthetase [Bacillus coagulans 36D1]
          Length = 419

 Score =  498 bits (1283), Expect = e-139,   Method: Composition-based stats.
 Identities = 153/423 (36%), Positives = 233/423 (55%), Gaps = 20/423 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D L  L  RG I+Q ++   L  L     VT Y G D T  S+H GHL   + L   Q+ 
Sbjct: 2   DLLEDLKWRGIIYQQTDEEGLAELLQNRKVTLYCGIDPTGDSMHIGHLLPYLTLRRFQQA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI ++GG T +IGDPS + E R+++  +++++N E +K     F  +  G++ A+M+
Sbjct: 62  GHRPIVVLGGATGMIGDPSGKKEERKLLTVEKVKQNGEALKKQLERFFDF-DGESGAIMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W  S+  +  LR+ G    +N ML+ +++ SRL  E  +SF EF Y ILQA D+  
Sbjct: 121 NNYDWHGSMDLVTFLRDYGKHIGINYMLAKDTIASRL--ETGISFTEFTYTILQAVDYFN 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERL--KTPKLFALTSPLLTTASGTKMGKTLSGA 244
           L K Y+CRLQ+GGSDQWGNI  G++L  +L  +  K F LT PL+T A GTK GKT SGA
Sbjct: 179 LYKQYNCRLQIGGSDQWGNITSGLELIRKLEPEGEKAFGLTIPLVTKADGTKFGKTESGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKII 302
           +WL+ E TSPY F+Q+W N  D DVV + K  T LP  EI+ + K       + +A+K +
Sbjct: 239 VWLDAEKTSPYEFYQFWVNTADLDVVKYLKYFTFLPKEEIEELEKSVETEPHLRKAQKAL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGL 352
           A E+T ++HG E  ++A       F  ++            + +P+  +  +E  +   L
Sbjct: 299 AAEMTKLIHGEEALQQALNITEALFSGNVKKLSAEEMKQGFKDVPSFQLESEEQKQ---L 355

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           + L+V A  + S  +AR  +++ AI +N   I++    +  QD        +  GKK + 
Sbjct: 356 VELLVAAKISPSKRQAREDIQNGAIYVNGDRITDLGYALGEQDKIGGEFTVIRRGKKKYF 415

Query: 413 ICH 415
           +  
Sbjct: 416 LIK 418


>gi|126461923|ref|YP_001043037.1| tyrosyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17029]
 gi|189029760|sp|A3PIU9|SYY_RHOS1 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|126103587|gb|ABN76265.1| tyrosyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17029]
          Length = 416

 Score =  498 bits (1283), Expect = e-139,   Method: Composition-based stats.
 Identities = 213/413 (51%), Positives = 277/413 (67%), Gaps = 2/413 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KSDFL ++ ERG++   ++ + LD   S GVV AYIGYD TA+SLH GHL  +M+L WLQ
Sbjct: 6   KSDFLRVMQERGYLADCTDMQALDEALSNGVVPAYIGYDATAASLHVGHLLNIMMLRWLQ 65

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           KTGHKPI+LMGGGT+ +GDPSFR E R ++    I ENIE ++ +F+ ++ YG G TDAL
Sbjct: 66  KTGHKPITLMGGGTTKVGDPSFRSEERPLLTPDRIDENIEGMRKVFARYLSYGEGATDAL 125

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           MLNN  WL  + Y+D LR+IG  FSVNRMLSFESV+SRL REQSLSFLEFNYMILQAYDF
Sbjct: 126 MLNNAEWLDQLNYLDFLRDIGRHFSVNRMLSFESVKSRLDREQSLSFLEFNYMILQAYDF 185

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL +   CRLQMGGSDQWGNI+ GIDL  R+   ++F LTSPLLTT+ G KMGK+  GA
Sbjct: 186 LELFRRTGCRLQMGGSDQWGNIVNGIDLTRRVLEGEIFGLTSPLLTTSDGRKMGKSAGGA 245

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WLN EM +PY+FWQ+WRN  DADV  F K  T LP+ E DR+  LQG EIN AK ++A 
Sbjct: 246 VWLNGEMLAPYDFWQFWRNTTDADVGRFLKLYTELPVEECDRLGALQGSEINAAKILLAN 305

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E+TT++HGR+ AE A   A   F+       +  + +    +  G+ +   +V AG   S
Sbjct: 306 EVTTLLHGRDAAEAAEATARAVFEEGGVGGALEVVELPAATLGDGLSVAHFLVAAGLVAS 365

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
             EA+R +  N ++ NN  + +    +          +K+S G+K H +  L 
Sbjct: 366 GKEAKRLVAENGLRFNNEPVGDANAPVTAA--TVGEELKVSIGRKKHKLVRLS 416


>gi|148992057|ref|ZP_01821831.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae SP9-BS68]
 gi|168489160|ref|ZP_02713359.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae SP195]
 gi|147929106|gb|EDK80117.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae SP9-BS68]
 gi|183572178|gb|EDT92706.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae SP195]
 gi|332071534|gb|EGI82027.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae GA17570]
          Length = 418

 Score =  498 bits (1283), Expect = e-139,   Method: Composition-based stats.
 Identities = 151/419 (36%), Positives = 229/419 (54%), Gaps = 17/419 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L +RG I Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  G
Sbjct: 3   IFDELKDRGLIFQTTDEEALRKALEEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKP +L+GG T +IGDPSF+D  R +     +   ++ I+G  S F+ +  G+  A+M+N
Sbjct: 63  HKPYALVGGATGLIGDPSFKDAERSLQTKDTVDGWVKSIQGQLSRFLDFENGENKAVMVN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W  SI +ID LR+IG +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF  L
Sbjct: 123 NYDWFGSISFIDFLRDIGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFFVL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            ++++  LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WL
Sbjct: 181 NQDHNVTLQIGGSDQWGNMTAGTELLRRKADKTGHVITVPLITDATGKKFGKSEGNAVWL 240

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATE 305
           N E TSPY  +Q+W N+ DAD V F K  T L + EI+ + K      +E  A+K++A E
Sbjct: 241 NPEKTSPYEMYQFWMNVMDADTVRFLKIFTFLSLDEIEDIRKQFEAAPHERLAQKVLARE 300

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTL 355
           + T+VHG E  ++A     + F  +I +          + +P   +  DE +    ++ L
Sbjct: 301 VVTLVHGEEAYKEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVQADENN---NIVEL 357

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +V +G   S  +AR  +++ AI +N   I +    +   D        +  GKK + + 
Sbjct: 358 LVSSGIVNSKRQAREDVQNGAIYVNGDRIQDLDYVLSDADKLENELTVIRRGKKKYFVL 416


>gi|332364273|gb|EGJ42048.1| tyrosine--tRNA ligase [Streptococcus sanguinis SK1059]
          Length = 419

 Score =  498 bits (1283), Expect = e-139,   Method: Composition-based stats.
 Identities = 148/416 (35%), Positives = 227/416 (54%), Gaps = 11/416 (2%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L ERG + Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  G
Sbjct: 4   IFDELKERGLVFQTTDEAALRKALEEGQVSYYSGYDPTADSLHLGHLVAILTSRRLQLAG 63

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKP +L+GG T +IGDPSFRD  R +   + ++  ++ I+   S F+ +  G   A M+N
Sbjct: 64  HKPYALVGGATGLIGDPSFRDAERSLQTKETVEGWVKSIQDQLSRFLDFEKGDNKAEMVN 123

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W  SI +ID LR++G +F+VN M+S +SV+SR+  E  +S+ EF Y I+Q YDF  L
Sbjct: 124 NYDWFSSISFIDFLRDVGKYFTVNYMMSKDSVKSRI--ETGISYTEFAYQIMQGYDFYIL 181

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            +N+D  LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WL
Sbjct: 182 NQNHDVTLQIGGSDQWGNMTAGTELLRRKADKTGHVITVPLITDATGKKFGKSEGNAVWL 241

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATE 305
           N + TSPY  +Q+W N+ DAD + F K  T L + EI+ + +      +E  A+KI+A E
Sbjct: 242 NPDKTSPYEMYQFWMNVMDADAIRFLKIFTFLSLDEIEEIRQQFEAAPHERLAQKILARE 301

Query: 306 ITTMVHGREEAEKAATAAMECFDMSI-------HSQHMPTISISKDEVSRGMGLLTLIVK 358
           + ++VHG+E   +A     + F  +I         Q +  +   + +    + ++ L+V 
Sbjct: 302 VVSLVHGQEAYLEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVQAEDNLNIVELLVT 361

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           AG   S  +AR  +++ AI +N   I +    +   D        +  GKK + + 
Sbjct: 362 AGVVNSKRQAREDVQNGAIYLNGERIQDLDYVLSASDKLEDELTVIRRGKKKYFVL 417


>gi|163942389|ref|YP_001647273.1| tyrosyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
 gi|229062344|ref|ZP_04199662.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus AH603]
 gi|229169389|ref|ZP_04297099.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus AH621]
 gi|163864586|gb|ABY45645.1| tyrosyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
 gi|228614152|gb|EEK71267.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus AH621]
 gi|228716949|gb|EEL68633.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus AH603]
          Length = 418

 Score =  498 bits (1283), Expect = e-139,   Method: Composition-based stats.
 Identities = 154/418 (36%), Positives = 227/418 (54%), Gaps = 11/418 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
             L  L  RG I+Q ++   L+ L  +  V  Y G+D TA SLH GH+  +++L   Q  
Sbjct: 2   GILQDLEFRGLINQQTDAEGLEQLLEKESVKLYCGFDPTADSLHIGHMLPVLMLRRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI+L+GGGT +IGDPS +   R +     +    E IK   S+F+++      A M 
Sbjct: 62  GHQPIALVGGGTGMIGDPSGKKAERTLNTKDTVAYYTESIKNQLSNFLEFENVDNPATMA 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL ++  I  LR+IG  F +N ML+ ++V SRL  +  +SF EF+YMILQ+YDF+ 
Sbjct: 122 NNYDWLGNLDVISFLRDIGKNFGLNYMLAKDTVASRL--DTGISFTEFSYMILQSYDFLN 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGER-LKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           L +N++CRLQ+GGSDQWGNI  G++L  +  +  K F LT PL+T + GTK GKT  GAI
Sbjct: 180 LYQNHNCRLQIGGSDQWGNITAGLELIRKSEEDAKAFGLTIPLVTKSDGTKFGKTEGGAI 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIA 303
           WL+ E T+PY F+Q+W N DD DVV + K  T L   EI  + K   +  E   A+K + 
Sbjct: 240 WLDPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLSHEEILELEKQVTEAPEKRAAQKSLG 299

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRGMGLLTLIV 357
           +E+T +VHG E  E+A   +   F  S+       I        S +  +    L+ L+V
Sbjct: 300 SEMTKLVHGEEALEQAIKISAALFSGSVAELTASEIEQGFKDVPSVERTAEDTVLIDLLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           ++  + S  +AR  + + AI +N          +   D        +  GKK + +  
Sbjct: 360 ESKISPSKRQAREDVTNGAIYVNGERTQALDYVVTENDRIEGKFTIIRRGKKKYFLIR 417


>gi|253582534|ref|ZP_04859756.1| tyrosyl-tRNA synthetase [Fusobacterium varium ATCC 27725]
 gi|251835679|gb|EES64218.1| tyrosyl-tRNA synthetase [Fusobacterium varium ATCC 27725]
          Length = 406

 Score =  498 bits (1283), Expect = e-139,   Method: Composition-based stats.
 Identities = 179/410 (43%), Positives = 258/410 (62%), Gaps = 7/410 (1%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +   +L  RG++ Q ++  E+  +  +  VT YIG+D TA SLH GH   +M +  +QK 
Sbjct: 3   NVFDVLVGRGYLKQFTHEEEMREILGKEKVTFYIGFDPTADSLHVGHFIAMMFMSHMQKH 62

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI+L+GGGT++IGDPS R + R MM  + I  N+  IK     FI +  GK  A++ 
Sbjct: 63  GHRPIALLGGGTAMIGDPSGRTDMRTMMSKETIAHNVAAIKKQMEKFIDFSDGK--AILE 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  + YID +R+IG+ FSVNRML+ E  +SR+  E  LSFLEFNYM++Q YDF+ 
Sbjct: 121 NNADWLLGLNYIDFIRDIGAHFSVNRMLAAECFKSRM--EVGLSFLEFNYMLMQGYDFLV 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + + C +Q+GG DQW N+I G++L  + +  + FA+T  LLT + G KMGKT  GA+W
Sbjct: 179 LNQKHGCTMQLGGDDQWSNMIAGVELIRKKEQKQAFAMTCTLLTNSEGKKMGKTAKGALW 238

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           L+ E TSPY F+QYWRN+DDADV      LT +PM E+ R++ L+G EINEAKKI+A EI
Sbjct: 239 LDPEKTSPYEFYQYWRNVDDADVEKCLSLLTFIPMDEVKRLSALEGAEINEAKKILAFEI 298

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
           T M+HG EEA KA TAA   F        +P++ I  +E   G+GL+  +V+ G   + +
Sbjct: 299 TKMIHGEEEALKAKTAAEALFGGGQDMSSVPSVEI--EEAVLGIGLIDFLVEKGILKTKS 356

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           E RR ++ N + I +S +++  + I  +D  + G   +  GKK +    L
Sbjct: 357 EGRRLVQQNGLNIGDSKVTDFTMPIT-KDLFANGEFLVKIGKKKYHKVVL 405


>gi|294677248|ref|YP_003577863.1| tyrosyl-tRNA synthetase [Rhodobacter capsulatus SB 1003]
 gi|294476068|gb|ADE85456.1| tyrosyl-tRNA synthetase [Rhodobacter capsulatus SB 1003]
          Length = 416

 Score =  498 bits (1283), Expect = e-139,   Method: Composition-based stats.
 Identities = 209/412 (50%), Positives = 279/412 (67%), Gaps = 2/412 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KS+FL ++ ERGF+   ++ +ELD   + G+VT YIGYD TA+SLH GHL  +MLL W Q
Sbjct: 6   KSEFLRVIIERGFLADCTDLQELDTALAGGMVTCYIGYDATAASLHVGHLLNIMLLRWFQ 65

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           KTGHKPI+LMGGGT+ +GDPSFR E R ++  + I ENI  ++ +F+ ++ Y      AL
Sbjct: 66  KTGHKPITLMGGGTTKVGDPSFRSEERPLLTPERIDENIAGMQRVFARYLDYKDDGNGAL 125

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M NN  WL  + Y++ LR+IG  FSVNRMLSFESV+SRL REQSLSFLEFNYMILQAYDF
Sbjct: 126 MRNNAEWLDDLNYLEFLRDIGRHFSVNRMLSFESVKSRLDREQSLSFLEFNYMILQAYDF 185

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL + Y C LQMGGSDQWGNI+ GIDL  R+   ++F LT+PLLTT+ G KMGK+  GA
Sbjct: 186 LELNRRYGCLLQMGGSDQWGNIVNGIDLTRRVLDREIFGLTTPLLTTSDGRKMGKSQGGA 245

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WLN EM SPY FWQ+WRN  DADV  F K  T LP+ E DR+ KL+G EIN AK I+A 
Sbjct: 246 VWLNGEMLSPYEFWQFWRNTTDADVGRFLKLYTDLPVEECDRLGKLEGSEINGAKIILAN 305

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E+TT++HG E A  A   A E F+     + +P +++  +E++ G+ L  L+V++G A +
Sbjct: 306 EVTTLLHGAEAAAAAEATAREVFEKGGVGEDLPRLTLGAEELAEGISLAQLVVRSGLAKT 365

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             + +R +    +K+++ I  +        D      +KLS GKK H +  L
Sbjct: 366 GKDGKRLISEGGLKVDDEICLDAGRMFSAADLAQP--VKLSAGKKRHALVSL 415


>gi|77463048|ref|YP_352552.1| tyrosyl-tRNA synthetase [Rhodobacter sphaeroides 2.4.1]
 gi|97201873|sp|Q3J3I3|SYY_RHOS4 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|77387466|gb|ABA78651.1| tyrosyl-tRNA synthetase [Rhodobacter sphaeroides 2.4.1]
          Length = 416

 Score =  498 bits (1282), Expect = e-139,   Method: Composition-based stats.
 Identities = 213/413 (51%), Positives = 278/413 (67%), Gaps = 2/413 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KSDFL ++ ERG++   ++ + LD   S+GVV AYIGYD TA+SLH GHL  +M+L WLQ
Sbjct: 6   KSDFLRVMQERGYLADCTDMQALDEALSKGVVPAYIGYDATAASLHVGHLLNIMMLRWLQ 65

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           KTGHKPI+LMGGGT+ +GDPSFR E R ++    I ENIE ++ +F+ ++ YG G TDAL
Sbjct: 66  KTGHKPITLMGGGTTKVGDPSFRSEERPLLTPDRIDENIEGMRKVFARYLSYGEGATDAL 125

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           MLNN  WL  + Y+D LR+IG  FSVNRMLSFESV+SRL REQSLSFLEFNYMILQAYDF
Sbjct: 126 MLNNAEWLDQLNYLDFLRDIGRHFSVNRMLSFESVKSRLDREQSLSFLEFNYMILQAYDF 185

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL +   CRLQMGGSDQWGNI+ GIDL  R+   ++F LTSPLLTT+ G KMGK+  GA
Sbjct: 186 LELFRRTGCRLQMGGSDQWGNIVNGIDLTRRVLEGEIFGLTSPLLTTSDGRKMGKSAGGA 245

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WLN EM +PY+FWQ+WRN  DADV  F K  T LP+ E DR+  LQG EIN AK ++A 
Sbjct: 246 VWLNGEMLAPYDFWQFWRNTTDADVGRFLKLYTELPVEECDRLGALQGSEINAAKILLAN 305

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E+TT++HGR+ AE A   A   F+       +  + +    +  G+ +   +V AG   S
Sbjct: 306 EVTTLLHGRDAAEAAEATARAVFEEGGVGGALEVVELPAATLGEGLSVAHFLVAAGLVAS 365

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
             EA+R +  N ++ NN  + +    +          +K+S G+K H +  L 
Sbjct: 366 GKEAKRLVAENGLRFNNEPVGDANTPVTAA--TVGEELKVSIGRKKHKLVRLS 416


>gi|260438865|ref|ZP_05792681.1| tyrosine--tRNA ligase [Butyrivibrio crossotus DSM 2876]
 gi|292808704|gb|EFF67909.1| tyrosine--tRNA ligase [Butyrivibrio crossotus DSM 2876]
          Length = 405

 Score =  498 bits (1282), Expect = e-139,   Method: Composition-based stats.
 Identities = 180/406 (44%), Positives = 252/406 (62%), Gaps = 8/406 (1%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
                L  RG I Q+++   +  L + G  T YIG+D TA SLH GH   L L+  LQ+ 
Sbjct: 2   GIYEELQARGLIAQVTDEPLIRDLINNGKATFYIGFDPTADSLHVGHFMALCLMKRLQEA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           G+KPI+L+GGGT++IGDPS R++ R MM  + I  N+E  K   S FI +   K  AL++
Sbjct: 62  GNKPIALIGGGTAMIGDPSGRNDMRSMMTKETINHNVECFKKQMSRFIDFSDDK--ALLV 119

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  + Y+DLLRE+G  FSVNRML+ E  + R+  E+ LSFLEFNYMI+Q++DF  
Sbjct: 120 NNADWLLDLNYVDLLREVGPHFSVNRMLTAECYKQRM--EKGLSFLEFNYMIMQSFDFYT 177

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + Y C LQ GG DQW N++ G +L  R       A+T  LL  + G KMGKT  GA+W
Sbjct: 178 LYQKYGCNLQFGGDDQWSNMLGGTELIRRKLGKDASAMTITLLLNSEGKKMGKTQKGAVW 237

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           L+ E TSPY F+QYWRN+DDADV+   K LT LP+SEI++MA  +G ++NEAK+I+A E+
Sbjct: 238 LDPEKTSPYEFFQYWRNVDDADVIKCLKMLTFLPLSEIEKMANWEGSQLNEAKEILAYEL 297

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATST 365
           T +VHG+EEAEKA  +A   F     + +MPT ++  D    G + L+TL+V  G   + 
Sbjct: 298 TALVHGKEEAEKAKESARSVFGAG-DASNMPTATVDDDCFKDGEVDLITLLVAGGLCQTR 356

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           ++ARR+++   + +N    ++ K      +F     I +  GKKN 
Sbjct: 357 SDARRNIEQGGVTVNGEKETDFKKTYTKDNFGDG--IVIKRGKKNF 400


>gi|299472939|emb|CBN77340.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 524

 Score =  498 bits (1282), Expect = e-139,   Method: Composition-based stats.
 Identities = 196/415 (47%), Positives = 270/415 (65%), Gaps = 3/415 (0%)

Query: 3   AFKSDFLSILSERGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLF 61
           + +S FL  L ERGF HQ +N   LD     G VV AY+G+D TA SLH G L Q+M+L 
Sbjct: 107 SVESPFLQTLVERGFYHQCTNVEGLDEKLRAGEVVKAYLGFDATADSLHVGSLLQIMILR 166

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKT 121
            LQK GH+PI L+GGGT+ IGDPS +DE+R+++    IQ NI+ +  +FS F+ +G G T
Sbjct: 167 HLQKAGHQPIVLVGGGTTKIGDPSGKDEARQLLDDAAIQRNIDGLASVFSKFLTFGDGPT 226

Query: 122 DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA 181
           DA ++NN  WL  + Y+D LRE G  F++NRM++++SVR RL+REQ L+FLEFNYM+LQA
Sbjct: 227 DAKLVNNNEWLNQLSYLDFLREYGPHFTINRMMTYDSVRLRLEREQPLTFLEFNYMLLQA 286

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
           YDF EL + Y C LQMGGSDQWGN++ G+DLG R++  +LFALT+PL+TT+ G KMGK+ 
Sbjct: 287 YDFTELYRRYGCVLQMGGSDQWGNMVNGVDLGRRVEKAELFALTAPLITTSEGKKMGKSA 346

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKI 301
           +GAIWLN E    Y++WQ+WRN DDADV+ F K  T L M EI ++ +L G  INEAK +
Sbjct: 347 AGAIWLNAEKLPEYDYWQFWRNTDDADVIRFLKLFTELSMDEILKLEQLTGAGINEAKIV 406

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQH--MPTISISKDEVSRGMGLLTLIVKA 359
           +A E T ++HG    ++      + F   +   +  +P   I   E   GM ++ L ++ 
Sbjct: 407 LADETTKLLHGEACLKEIHQTVKQVFAGGVGGSNAALPRAKIESAEAEAGMAVVDLFIRL 466

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
             A + +E RR +K    K+N+  I +E   + L  FD    +KLS GKK H I 
Sbjct: 467 ELAKTKSEVRRLIKGGGAKLNDQKIVDEGFVVDLSTFDGKDELKLSSGKKRHGII 521


>gi|229076168|ref|ZP_04209136.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus Rock4-18]
 gi|229099139|ref|ZP_04230073.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus Rock3-29]
 gi|228684367|gb|EEL38311.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus Rock3-29]
 gi|228707031|gb|EEL59236.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus Rock4-18]
          Length = 418

 Score =  498 bits (1282), Expect = e-139,   Method: Composition-based stats.
 Identities = 154/418 (36%), Positives = 228/418 (54%), Gaps = 11/418 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
             L  L  RG I+Q ++   L+ L  +  V  Y G+D TA SLH GH+  +++L   Q  
Sbjct: 2   GILQDLEFRGLINQQTDAEGLEQLLEKESVKLYCGFDPTADSLHIGHMLPVLMLRRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI+L+GGGT +IGDPS +   R +     +    E IK   S+F+++   +  A M 
Sbjct: 62  GHQPIALVGGGTGMIGDPSGKKAERTLNTKDTVAYYTESIKNQLSNFLEFENVENPATMA 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL ++  I  LR+IG  F +N ML+ ++V SRL  +  +SF EF+YMILQ+YDF+ 
Sbjct: 122 NNYDWLGNLDVISFLRDIGKNFGLNYMLAKDTVASRL--DTGISFTEFSYMILQSYDFLN 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGER-LKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           L +N++CRLQ+GGSDQWGNI  G++L  +  +  K F LT PL+T + GTK GKT  GAI
Sbjct: 180 LYQNHNCRLQIGGSDQWGNITAGLELIRKSEEDAKAFGLTIPLVTKSDGTKFGKTEGGAI 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIA 303
           WL+ E T+PY F+Q+W N DD DVV + K  T L   EI  + K   +  E   A+K + 
Sbjct: 240 WLDPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLSHEEILDLEKQVAEAPEKRAAQKALG 299

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRGMGLLTLIV 357
           +E+T +VHG E  E+A   +   F  S+       I        S +  +    L+ L+V
Sbjct: 300 SEMTKLVHGEEALEQAIKISAALFSGSVAELTASEIEQGFKDVPSVERTAEDTVLIDLLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           ++  + S  +AR  + + AI +N          +   D        +  GKK + +  
Sbjct: 360 ESKISPSKRQAREDVTNGAIYVNGERTQALDYVVTENDRIEGKFTIIRRGKKKYFLIR 417


>gi|15901915|ref|NP_346519.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae TIGR4]
 gi|15903951|ref|NP_359501.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae R6]
 gi|111657584|ref|ZP_01408321.1| hypothetical protein SpneT_02001219 [Streptococcus pneumoniae
           TIGR4]
 gi|116516055|ref|YP_817314.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae D39]
 gi|149002930|ref|ZP_01827841.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS69]
 gi|168484388|ref|ZP_02709340.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae CDC1873-00]
 gi|221232808|ref|YP_002511962.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae ATCC 700669]
 gi|225855587|ref|YP_002737099.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae JJA]
 gi|225857673|ref|YP_002739184.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae P1031]
 gi|237650579|ref|ZP_04524831.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae CCRI 1974]
 gi|237821719|ref|ZP_04597564.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae CCRI 1974M2]
 gi|81449400|sp|Q8DN52|SYY_STRR6 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|81531469|sp|Q97NE3|SYY_STRPN RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|122277840|sp|Q04I74|SYY_STRP2 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|254783644|sp|B8ZPM2|SYY_STRPJ RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|254783647|sp|C1CH28|SYY_STRZJ RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|254783648|sp|C1CN46|SYY_STRZP RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|14973611|gb|AAK76159.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae TIGR4]
 gi|15459605|gb|AAL00712.1| Tyrosyl-tRNA synthetase 1 [Streptococcus pneumoniae R6]
 gi|116076631|gb|ABJ54351.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae D39]
 gi|147758933|gb|EDK65928.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS69]
 gi|172042350|gb|EDT50396.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae CDC1873-00]
 gi|220675270|emb|CAR69863.1| putative tyrosyl-tRNA synthetase [Streptococcus pneumoniae ATCC
           700669]
 gi|225723386|gb|ACO19239.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae JJA]
 gi|225724666|gb|ACO20518.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae P1031]
 gi|332071369|gb|EGI81863.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae GA41301]
 gi|332198708|gb|EGJ12790.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae GA47368]
          Length = 418

 Score =  498 bits (1282), Expect = e-139,   Method: Composition-based stats.
 Identities = 152/419 (36%), Positives = 228/419 (54%), Gaps = 17/419 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L ERG I Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  G
Sbjct: 3   IFDELKERGLIFQTTDEEALRKALEEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKP +L+GG T +IGDPSF+D  R +     +   ++ I+G  S F+ +  G+  A+M+N
Sbjct: 63  HKPYALVGGATGLIGDPSFKDAERSLQTKDTVDGWVKSIQGQLSRFLDFENGENKAVMVN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W  SI +ID LR+IG +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF  L
Sbjct: 123 NYDWFGSISFIDFLRDIGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFFVL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            ++++  LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WL
Sbjct: 181 NQDHNVTLQIGGSDQWGNMTAGTELLRRKADKTGHVITVPLITDATGKKFGKSEGNAVWL 240

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATE 305
           N E TSPY  +Q+W N+ DAD V F K  T L + EI+ + K      +E  A+K++A E
Sbjct: 241 NPEKTSPYEMYQFWMNVMDADAVRFLKIFTFLSLDEIEDIRKQFEAAPHERLAQKVLARE 300

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTL 355
           + T+VHG E  ++A     + F  +I +          + +P   +  DE +    ++ L
Sbjct: 301 VVTLVHGEEAYKEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVQADENN---NIVEL 357

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +V +G   S  +AR  +++ AI +N   I      +   D        +  GKK + + 
Sbjct: 358 LVSSGIVNSKRQAREDVQNGAIYVNGDRIQELDYVLSDADKLENELTVIRRGKKKYFVL 416


>gi|290579692|ref|YP_003484084.1| putative tyrosyl-tRNA synthetase [Streptococcus mutans NN2025]
 gi|254996591|dbj|BAH87192.1| putative tyrosyl-tRNA synthetase [Streptococcus mutans NN2025]
          Length = 418

 Score =  498 bits (1282), Expect = e-139,   Method: Composition-based stats.
 Identities = 146/419 (34%), Positives = 223/419 (53%), Gaps = 17/419 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG + Q ++   L      G V+ Y GYD TA SLH GHL  ++++  LQ  G
Sbjct: 3   IFEELKARGLVFQTTDEEALKKSLDDGQVSFYTGYDPTADSLHLGHLVPILVMRHLQLVG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKP +L+GG T +IGDPSF+D+ R +   + ++  ++ I+     FI +  G   A M+N
Sbjct: 63  HKPYALVGGATGLIGDPSFKDDERSLQTKETVENWVQSIRNQLERFIDFKHGDNKAQMVN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W+  I +ID LR++G +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF  L
Sbjct: 123 NYDWMGKITFIDFLRDVGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFYVL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            + +   LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WL
Sbjct: 181 NQEHAVTLQVGGSDQWGNMTAGTELIRRKANKTAHVITVPLITDATGKKFGKSEGNAVWL 240

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATE 305
           + + TSPY  +Q+W N+ DAD + F K  T L + EI+ +        +E  A+KI+A E
Sbjct: 241 DADKTSPYEMYQFWLNVMDADAIRFLKIFTFLSLDEIEDIRVKFEAAPHERLAQKILAKE 300

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTL 355
           + T VHG+   ++A     + F   I S           ++P  ++     +    ++ L
Sbjct: 301 VVTFVHGQTAYQEAVKITEQLFAGHIKSLSAKELKQGLSNVPNYAVKS---NDNHNIVEL 357

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +V AG   S  +AR  L++ AI IN   I +    +  QD        +  GKK + + 
Sbjct: 358 LVTAGIVNSKRQAREDLQNGAIYINGERIQDLTYNLSQQDKIDNELTVIRRGKKKYFVL 416


>gi|229135496|ref|ZP_04264282.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus BDRD-ST196]
 gi|228647961|gb|EEL04010.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus BDRD-ST196]
          Length = 418

 Score =  498 bits (1282), Expect = e-139,   Method: Composition-based stats.
 Identities = 154/418 (36%), Positives = 226/418 (54%), Gaps = 11/418 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
             L  L  RG I+Q ++   L+ L  +  V  Y G+D TA SLH GH+  +++L   Q  
Sbjct: 2   GILQDLEFRGLINQQTDAEGLEQLLEKESVKLYCGFDPTADSLHIGHMLPVLMLRRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI+L+GGGT +IGDPS +   R +     +    E IK   S+F+++      A M 
Sbjct: 62  GHQPIALVGGGTGMIGDPSGKKAERTLNTKDTVAYYTESIKNQLSNFLEFENVDNPATMA 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL ++  I  LR+IG  F +N ML+ ++V SRL  E  +SF EF+YMILQ+YDF+ 
Sbjct: 122 NNYDWLGNLDVITFLRDIGKNFGLNYMLAKDTVASRL--ETGISFTEFSYMILQSYDFLN 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGER-LKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           L + ++CRLQ+GGSDQWGNI  G++L  +  +  K F LT PL+T + GTK GKT  GAI
Sbjct: 180 LYQQHNCRLQIGGSDQWGNITAGLELIRKSEEDAKAFGLTIPLVTKSDGTKFGKTEGGAI 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIA 303
           WL+ E T+PY F+Q+W N DD DVV + K  T L   EI  + K   +  E   A+K + 
Sbjct: 240 WLDPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLSHEEILELEKQVTEAPEKRAAQKSLG 299

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRGMGLLTLIV 357
           +E+T +VHG E  E+A   +   F  S+       I        S +  +    L+ L+V
Sbjct: 300 SEMTKLVHGEEALEQAIKISAALFSGSVAELTASEIEQGFKDVPSVERTAEDTVLIDLLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           ++  + S  +AR  + + AI +N          +   D        +  GKK + +  
Sbjct: 360 ESKISPSKRQAREDVTNGAIYVNGERTQALDYVVTENDRIEGKFTIIRRGKKKYFLIR 417


>gi|56697334|ref|YP_167700.1| tyrosyl-tRNA synthetase [Ruegeria pomeroyi DSS-3]
 gi|81349511|sp|Q5LQK5|SYY_SILPO RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|56679071|gb|AAV95737.1| tyrosyl-tRNA synthetase [Ruegeria pomeroyi DSS-3]
          Length = 415

 Score =  498 bits (1282), Expect = e-139,   Method: Composition-based stats.
 Identities = 210/413 (50%), Positives = 281/413 (68%), Gaps = 5/413 (1%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KSDF++++ ERGF+   ++ + LD    +G    YIG+D TA SLH G L Q+M+L WLQ
Sbjct: 6   KSDFIAVMMERGFLADCTDYQGLDEALMKGCQPGYIGFDATAKSLHVGSLIQIMMLRWLQ 65

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG-KTDA 123
           KTGHKPI+LMGGGT+ +GDPSFR + R ++   +I +NI  I+ +F+++I Y +G +  A
Sbjct: 66  KTGHKPITLMGGGTTKVGDPSFRADERPLLTPAQIDDNIAGIRKVFAAYIDYDSGAENAA 125

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           LMLNNE WL  + Y+D LR+IG  FSVNRMLSFESV+SRL REQSLSFLEFNYMILQAYD
Sbjct: 126 LMLNNEEWLDDLNYLDFLRDIGRHFSVNRMLSFESVKSRLDREQSLSFLEFNYMILQAYD 185

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+EL + Y C LQMGGSDQWGNI+ GIDL  R+   +++ LTSPLLTT+ G KMGK+  G
Sbjct: 186 FMELNRRYGCILQMGGSDQWGNIVNGIDLTRRVIDHEVYGLTSPLLTTSDGKKMGKSQDG 245

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIA 303
           A+WLN +M SPY FWQ+WRN  DADV  F K  T LP+ E DR+  L G EIN AK I+A
Sbjct: 246 AVWLNPDMRSPYEFWQFWRNTTDADVGRFLKLYTELPVGECDRLGALAGSEINAAKVILA 305

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
            E+T + HG E A  A   A E F+       +PT+++   ++     ++ LIVK G A 
Sbjct: 306 NEVTALCHGAEAAATAEATAREVFEKGGIGDDLPTLTLGAADL--PASIVQLIVKTGLAK 363

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           S  EA+R +  +  ++N++ +++  + I+  D  +   IKLS GKK H +  L
Sbjct: 364 SGKEAKRLIAEDGARLNDAPLTDAGMMIEAGDLAAP--IKLSAGKKRHALVQL 414


>gi|16800707|ref|NP_470975.1| tyrosyl-tRNA synthetase [Listeria innocua Clip11262]
 gi|81526868|sp|Q92BB1|SYY_LISIN RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|16414126|emb|CAC96870.1| tyrosyl-tRNA synthetase [Listeria innocua Clip11262]
          Length = 419

 Score =  498 bits (1282), Expect = e-139,   Method: Composition-based stats.
 Identities = 157/422 (37%), Positives = 221/422 (52%), Gaps = 21/422 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG I+Q ++   L     +  ++ Y G D +  S+H GHL   M+L   Q  
Sbjct: 2   NIIDELEWRGAIYQQTDEEGLRKWVEEKQISLYCGIDPSGDSMHIGHLIPFMILRRFQNA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI L+GG T  IGDPS + E R++   ++I +N+E ++        +  G + A M+
Sbjct: 62  GHRPIILVGGATGTIGDPSGKKEERKLQSMEQISKNVESLRVQLGKIFDF-EGDSAASMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   +  +D LR+ G  F+VN MLS + V SRL  E  +SF EF Y ILQA DF  
Sbjct: 121 NNYDWTKDVSILDFLRDYGKEFNVNTMLSKDIVASRL--EVGISFTEFAYQILQAMDFNH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSGA 244
           L +  DCRLQ+GGSDQWGNI  G+DL  + +    K F LT PLLT A GTK GK+  GA
Sbjct: 179 LYEFNDCRLQIGGSDQWGNITAGLDLIRKKQGENAKAFGLTIPLLTKADGTKFGKSEGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKII 302
           IWLN E T+PY F+Q+W N DD DVV + K  T L  +EID +AK   +   +  A+K +
Sbjct: 239 IWLNPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLTEAEIDELAKQVEEEPHLRAAQKTL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGL 352
           A E+T  VH  E  E+A   +   F   + +          + +PT      EV+    L
Sbjct: 299 AAEMTKFVHSEEALEQALKISKALFSGDVTALTADEIEQGFKDVPTFVAEDAEVN----L 354

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           +  +V  G   S  +AR  + + AI IN     N +  I   D        +  GKK + 
Sbjct: 355 VDWLVTLGIEPSKRQAREDVTNGAIYINGERQQNVEKVIDASDRIENKFTIVRRGKKKYF 414

Query: 413 IC 414
           + 
Sbjct: 415 LV 416


>gi|322378015|ref|ZP_08052502.1| tyrosine--tRNA ligase [Streptococcus sp. M334]
 gi|321280997|gb|EFX58010.1| tyrosine--tRNA ligase [Streptococcus sp. M334]
          Length = 418

 Score =  498 bits (1282), Expect = e-139,   Method: Composition-based stats.
 Identities = 153/419 (36%), Positives = 229/419 (54%), Gaps = 17/419 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L ERG I Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  G
Sbjct: 3   IFDELKERGLIFQTTDEEALRKALEEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKP +L+GG T +IGDPSF+D  R +     +   ++ I+G  S F+ +  G+  A+M+N
Sbjct: 63  HKPYALVGGATGLIGDPSFKDAERSLQTKDTVDGWVKSIQGQLSRFLDFENGENKAVMVN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W  SI +ID LR+IG +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF  L
Sbjct: 123 NYDWFGSISFIDFLRDIGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFFVL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            ++++  LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WL
Sbjct: 181 NQDHNVTLQIGGSDQWGNMTAGTELLRRKADKTGHVITVPLITDATGKKFGKSEGNAVWL 240

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATE 305
           N E TSPY  +Q+W N+ DAD V F K  T L + EI+ + K      +E  A+KI+A E
Sbjct: 241 NPEKTSPYEMYQFWMNVMDADAVRFLKIFTFLSLDEIEDIRKQFEVAPHERLAQKILARE 300

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTL 355
           + T+VHG E  ++A     + F  +I +          + +P   + +DE      ++ L
Sbjct: 301 VVTLVHGEEAYKEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVQEDE---NHNIVEL 357

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +V +G   S  +AR  +++ AI +N   I +    +   D        +  GKK + + 
Sbjct: 358 LVSSGVVNSKRQAREDVQNGAIYVNGDRIQDLDYVLSDADKLENELTVIRRGKKKYFVL 416


>gi|228967760|ref|ZP_04128776.1| Tyrosyl-tRNA synthetase 1 [Bacillus thuringiensis serovar sotto
           str. T04001]
 gi|228791914|gb|EEM39500.1| Tyrosyl-tRNA synthetase 1 [Bacillus thuringiensis serovar sotto
           str. T04001]
          Length = 418

 Score =  498 bits (1282), Expect = e-139,   Method: Composition-based stats.
 Identities = 155/418 (37%), Positives = 226/418 (54%), Gaps = 11/418 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
             L  L  RG I+Q ++   L+ L  +  V  Y G+D TA SLH GH+  +++L   Q  
Sbjct: 2   GILQDLEFRGLINQQTDAEGLEQLLEKESVKLYCGFDPTADSLHIGHMLPVLMLRRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI+L+GGGT +IGDPS +   R +     +    E IK   S+F+++      A M 
Sbjct: 62  GHQPIALVGGGTGMIGDPSGKKAERTLNTKDTVAYYTESIKNQLSNFLEFENVDNPATMA 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL S+  I  LR+IG  F +N ML+ ++V SRL  E  +SF EF+YMILQ+YDF+ 
Sbjct: 122 NNYDWLGSLDVISFLRDIGKNFGLNYMLAKDTVASRL--ETGISFTEFSYMILQSYDFLN 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGER-LKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           L + ++CRLQ+GGSDQWGNI  G++L  +  +  K F LT PL+T + GTK GKT  GAI
Sbjct: 180 LYQQHNCRLQIGGSDQWGNITAGLELIRKSEEDAKAFGLTIPLVTKSDGTKFGKTEGGAI 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIA 303
           WL+ E T+PY F+Q+W N DD DVV + K  T L   EI  + K   +  E   A+K + 
Sbjct: 240 WLDPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLSHEEILELEKQVAEAPEKRAAQKALG 299

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRGMGLLTLIV 357
           +E+T +VHG E  E+A   +   F  S+       I        S +  +    L+ L+V
Sbjct: 300 SEMTKLVHGEEAFEQAIKISAALFSGSVAELTASEIEQGFKDVPSVERTAEDTVLIDLLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           ++  + S  +AR  + + AI +N          +   D        +  GKK + +  
Sbjct: 360 ESKISPSKRQAREDVTNGAIYVNGERTQALDYVVTENDRIEGKFTIIRRGKKKYFLIR 417


>gi|288574419|ref|ZP_06392776.1| tyrosyl-tRNA synthetase [Dethiosulfovibrio peptidovorans DSM 11002]
 gi|288570160|gb|EFC91717.1| tyrosyl-tRNA synthetase [Dethiosulfovibrio peptidovorans DSM 11002]
          Length = 441

 Score =  498 bits (1282), Expect = e-139,   Method: Composition-based stats.
 Identities = 167/420 (39%), Positives = 257/420 (61%), Gaps = 11/420 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D L +L +RG+I   S+P EL+ L  +  VTAY+G+D TA SLH GHL  LM L WLQK 
Sbjct: 19  DALKVLRDRGYIDWCSHPEELEELFREDRVTAYVGFDPTADSLHVGHLIPLMGLAWLQKL 78

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+P+ L GGGT +IGDPS + + R ++  ++I++N+E +K   S F+ + +G   AL++
Sbjct: 79  GHRPVVLAGGGTGMIGDPSGKSKERNLLSIEQIRKNVEAVKKQLSHFVSFDSGDNSALLV 138

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL-KREQSLSFLEFNYMILQAYDFV 185
           NN  WL S+ +++ LR++G  F+VN M++ E V+SRL   E+S+SF EF+Y +LQAYDF+
Sbjct: 139 NNYDWLNSMTFLEFLRDVGKHFTVNYMVAKEHVKSRLGDPEKSISFTEFSYTLLQAYDFL 198

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L + Y C+LQMGG+DQ GNI+ GIDL  +    +++  T+PLL T+SGTK GKT  GA+
Sbjct: 199 HLYRTYGCKLQMGGNDQQGNIVSGIDLIRKTDGAQVYGGTNPLLLTSSGTKFGKTEGGAV 258

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKKIIA 303
           WL++  TSPY F+Q+W N +D  V    K  T L + +I  + +      E  EA+KI+A
Sbjct: 259 WLDRAKTSPYRFYQFWVNSEDQAVEKLLKLFTFLSLEKISEIMEEHSVSPERREAQKILA 318

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPT-------ISISKDEVSR-GMGLLTL 355
            E+T++VHG++ AE A  A+   F  +     + +         +   EV      L+ +
Sbjct: 319 MELTSLVHGKDRAETARRASEILFGGAFDPVELSSEMMKVLAAEVPYFEVGDISRPLIDI 378

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +V +  ++S  EARR +K   + +N + IS+E++++        G + L  GKK   +  
Sbjct: 379 MVDSAVSSSKGEARRLIKGGGVSVNGNRISDERMELDGSWLLQEGYLFLKVGKKKFFVLK 438


>gi|89076033|ref|ZP_01162396.1| tyrosyl-tRNA synthetase [Photobacterium sp. SKA34]
 gi|89048268|gb|EAR53849.1| tyrosyl-tRNA synthetase [Photobacterium sp. SKA34]
          Length = 424

 Score =  498 bits (1282), Expect = e-139,   Method: Composition-based stats.
 Identities = 154/418 (36%), Positives = 229/418 (54%), Gaps = 11/418 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L +RG I QI++   L    ++G +T Y G+D TA SLH GHL  L+ L   Q+ 
Sbjct: 5   NLIQELKDRGLIAQITDEEALSERLAKGPITLYCGFDPTADSLHLGHLVPLLCLKRFQEA 64

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P++L+GG T +IGDPSF+   R +     +   + KI+   S F+ +      A M+
Sbjct: 65  GHNPVALVGGATGMIGDPSFKAAERSLNTLDTVSGWVTKIQRQVSPFLDFDNPTNPARMV 124

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYDFV 185
           NN  W  ++  +  LR+IG  FSVN+M+S ESV+ R+ R++  +SF EF Y +LQ+YDF 
Sbjct: 125 NNHDWFGNMDVLTFLRDIGKHFSVNQMISKESVKQRINRDEVGISFTEFAYSLLQSYDFA 184

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            + K     LQ+GGSDQWGNI  GIDL  R+   ++F +T PL+T + GTK GKT  GA+
Sbjct: 185 SMNKEMGMELQIGGSDQWGNITAGIDLTRRMNQQQVFGMTVPLITKSDGTKFGKTEGGAV 244

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSE---IDRMAKLQGKEINEAKKII 302
           WL+   TSPY F+Q+W N  DADV  F    T L   E   I+   +  GK   EA++I+
Sbjct: 245 WLDPSKTSPYKFYQFWMNTADADVYRFLCFFTFLSEEEIQQIEDTDRNSGKAP-EAQRIL 303

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSI------HSQHMPTISISKDEVSRGMGLLTLI 356
           A + T +VHG+E+ E A       F+  +          +    +   E   G  L  ++
Sbjct: 304 AEQATRLVHGQEQLEAAQNITRCLFENDLAHLSESDFAQLAQDGMPSAEAENGDDLQQVL 363

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           VK+G A+S ++A+ H+ SNAI +N   +     +    D        +  GKKN+ + 
Sbjct: 364 VKSGLASSRSQAKTHISSNAIMVNGEKLGEPFYEFTDADKLFGRYTLIRRGKKNYSLI 421


>gi|226939536|ref|YP_002794609.1| Syy [Laribacter hongkongensis HLHK9]
 gi|254783613|sp|C1DCW5|SYY_LARHH RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|226714462|gb|ACO73600.1| Syy [Laribacter hongkongensis HLHK9]
          Length = 425

 Score =  498 bits (1282), Expect = e-139,   Method: Composition-based stats.
 Identities = 153/420 (36%), Positives = 227/420 (54%), Gaps = 11/420 (2%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           + + +  L  RG I Q ++   L  L     VT Y G+D TA SLH GHL  L++L   Q
Sbjct: 3   ERNVIQELEARGLIAQQTDSGALQKLLESESVTLYCGFDPTADSLHLGHLVPLLMLRRFQ 62

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + GH+PI+L+GG T +IGDPSF+   R++     I   ++KI+   S F+ +  G   A+
Sbjct: 63  EAGHRPIALVGGATGMIGDPSFKAAERKLNTPDVIAGWVDKIRRQLSPFLSF-EGDNAAV 121

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYD 183
           M NN  W   +  ++ LR+IG  FSVN M+  ESV+ R+ RE Q +SF EF+Y +LQ  D
Sbjct: 122 MANNYDWFGQMNVLEFLRDIGKHFSVNAMIKKESVQQRISREDQGISFTEFSYSLLQGND 181

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F EL   + C+LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GK+   
Sbjct: 182 FAELNCRFGCKLQIGGSDQWGNITAGIDLTRRLNQQQVFGLTVPLITNSDGTKFGKSEGN 241

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKI 301
           A+WL+ +  SPY F+Q+W  + DADV  F +  T L + +ID +           +A++I
Sbjct: 242 AVWLDPQKCSPYKFYQFWLGVADADVYRFLRYFTFLSIEQIDAIEAADKTSGTRPQAQRI 301

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIH---SQHMPTISIS----KDEVSRGMGLLT 354
           +A E T +VHG E  + A       F   +    ++ +  +++      D   +G GL+ 
Sbjct: 302 LAEEATRLVHGDEALKAAQRITESLFSNDLSALTAEDLAQLALDGLPVLDMAGQGDGLID 361

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +  +G A S +EAR  ++S A+ IN          +   D        L  GKK + + 
Sbjct: 362 ALAASGLAKSKSEARTFIQSGAVSINGIKAEGLDYCLTGNDRLFGRYTLLKRGKKLYALL 421


>gi|254736771|ref|ZP_05194477.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. Western North
           America USA6153]
          Length = 418

 Score =  497 bits (1281), Expect = e-138,   Method: Composition-based stats.
 Identities = 154/418 (36%), Positives = 228/418 (54%), Gaps = 11/418 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
             L  L  RG I+Q ++   L+ L  +  V  Y G+D TA SLH GH+  +++L   Q  
Sbjct: 2   GILQDLEFRGLINQQTDAEGLEQLLEKESVKLYCGFDPTADSLHIGHMLPVLMLRRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI+L+GGGT +IGDPS +   R +     +    E IK   S+F+++   +  A M 
Sbjct: 62  GHQPIALVGGGTGMIGDPSGKKAERTLNTKDTVAYYTESIKNQLSNFLEFENVENPATMA 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL ++  I  LR+IG  F +N ML+ ++V SRL  E  +SF EF+YMILQ+YDF+ 
Sbjct: 122 NNYDWLGNLDVISFLRDIGKNFGLNYMLAKDTVASRL--ETGISFTEFSYMILQSYDFLN 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGER-LKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           L ++++CRLQ+GGSDQWGNI  G++L  +  +  K F LT PL+T + GTK GKT  GAI
Sbjct: 180 LYQHHNCRLQIGGSDQWGNITAGLELIRKSEEDAKAFGLTIPLVTKSDGTKFGKTEGGAI 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIA 303
           WL+ E T+PY F+Q+W N DD DVV + K  T L   EI  + K   +  E   A+K + 
Sbjct: 240 WLDPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLSHEEILELEKQVAEAPEKRAAQKALG 299

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS-----ISKDE-VSRGMGLLTLIV 357
            E+T +VHG E  E+A   +   F  S+       I      +   E  +    L+ L+V
Sbjct: 300 AEMTKLVHGEEALEQAIKISAALFSGSVAELTASEIEQGFKDVPFVERTAEDTVLIDLLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           ++  + S  +AR  + + AI +N          +  +D        +  GKK + +  
Sbjct: 360 ESKISPSKRQAREDVTNGAIYVNGERTQALDYVVTEKDRIEGKFTIIRRGKKKYFLIR 417


>gi|325674262|ref|ZP_08153951.1| tyrosine--tRNA ligase [Rhodococcus equi ATCC 33707]
 gi|325554942|gb|EGD24615.1| tyrosine--tRNA ligase [Rhodococcus equi ATCC 33707]
          Length = 425

 Score =  497 bits (1281), Expect = e-138,   Method: Composition-based stats.
 Identities = 150/421 (35%), Positives = 231/421 (54%), Gaps = 13/421 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + L  L+ RG I Q ++   L      G VT Y G+D T  SLHAGHL  L+ L   Q+ 
Sbjct: 4   NILDELTWRGLIAQSTDLDALRRETEAGPVTLYAGFDPTGPSLHAGHLVPLLALKRFQRA 63

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI + GG T +IGDP    E R M  +  + +  ++I+     F+ +    T A++ 
Sbjct: 64  GHRPIVMAGGATGMIGDPRDVGE-RVMNTADTVADWADRIRSQLERFVDFDESPTGAVIE 122

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   +  ID LR++G  FSVN ML+ ++V+ RL+ +  +S+ EF+YM+LQA DFV 
Sbjct: 123 NNANWTSKLTAIDFLRDVGKHFSVNVMLARDTVKRRLETD-GISYTEFSYMLLQANDFVH 181

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT-LSGAI 245
           L +NY C LQ+GGSDQWGNII G+DL  +L    + A+T PL+T+A G K GK+   G++
Sbjct: 182 LRRNYGCTLQVGGSDQWGNIIAGVDLNRKLDGESVHAMTVPLVTSADGKKFGKSTGGGSL 241

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIA 303
           WL+ EMTSPY ++QY+ N  DADVV + +  T L   E+    +A  +  +  EA++ +A
Sbjct: 242 WLDPEMTSPYAWYQYFVNTGDADVVKYLRWFTFLTQEELAELEVATAERPQAREAQRRLA 301

Query: 304 TEITTMVHGREEAEKAATAAMECF--------DMSIHSQHMPTISISKDEVSRGMGLLTL 355
            E+TT+VHG+   +    A+   F        D S  +  +   SI++        ++ L
Sbjct: 302 AEMTTLVHGQANTDAVELASKALFGRAELTDLDESTLAAALKEASIAEVAGDAPRTIVDL 361

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +V +G + S   ARR +K     +NN  + ++    +  D      + +  G+KN     
Sbjct: 362 LVASGLSESKGAARRAVKEGGAYVNNQRVESDDWTPESSDLLHGRWLVIRRGRKNFAGIK 421

Query: 416 L 416
           +
Sbjct: 422 V 422


>gi|313618700|gb|EFR90627.1| tyrosyl-tRNA synthetase [Listeria innocua FSL S4-378]
          Length = 429

 Score =  497 bits (1281), Expect = e-138,   Method: Composition-based stats.
 Identities = 158/425 (37%), Positives = 221/425 (52%), Gaps = 21/425 (4%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
            K + +  L  RG I+Q ++   L     +   + Y G D +  S+H GHL   M+L   
Sbjct: 9   MKMNIIDELEWRGAIYQQTDEEGLRKWVEEKQXSLYCGIDPSGDSMHIGHLIPFMILRRF 68

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q  GH+PI L+GG T  IGDPS + E R++   ++I +N+E ++        +  G + A
Sbjct: 69  QNAGHRPIILVGGATGTIGDPSGKKEERKLQSMEQISKNVESLRVQLGKIFDF-EGDSAA 127

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            M+NN  W   +  +D LR+ G  F+VN MLS + V SRL  E  +SF EF Y ILQA D
Sbjct: 128 SMVNNYDWTKDVSILDFLRDYGKEFNVNTMLSKDIVASRL--EVGISFTEFAYQILQAMD 185

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTL 241
           F  L +  DCRLQ+GGSDQWGNI  G+DL  + +    K F LT PLLT A GTK GK+ 
Sbjct: 186 FNHLYEFNDCRLQIGGSDQWGNITAGLDLIRKKQGENAKAFGLTIPLLTKADGTKFGKSE 245

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAK 299
            GAIWLN E T+PY F+Q+W N DD DVV + K  T L  +EID +AK   +   +  A+
Sbjct: 246 GGAIWLNPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLTEAEIDELAKQVEEEPHLRAAQ 305

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRG 349
           K +A E+T  VH  E  E+A   +   F   + +          + +PT      EV+  
Sbjct: 306 KTLAAEMTKFVHSEEALEQALKISKALFSGDVTALTADEIEQGFKDVPTFVAEDVEVN-- 363

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
             L+  +V  G   S  +AR  + + AI IN     N +  I   D        +  GKK
Sbjct: 364 --LVDWLVSLGIEPSKRQAREDVTNGAIYINGERQQNVEKVIDASDRIENKFTIVRRGKK 421

Query: 410 NHIIC 414
            + + 
Sbjct: 422 KYFLV 426


>gi|313623573|gb|EFR93749.1| tyrosyl-tRNA synthetase [Listeria innocua FSL J1-023]
          Length = 429

 Score =  497 bits (1281), Expect = e-138,   Method: Composition-based stats.
 Identities = 158/425 (37%), Positives = 221/425 (52%), Gaps = 21/425 (4%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
            K + +  L  RG I+Q ++   L     +   + Y G D +  S+H GHL   M+L   
Sbjct: 9   MKMNIIDELEWRGAIYQQTDEEGLRKWVEEKQXSLYCGIDPSGDSMHIGHLIPFMILRRF 68

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q  GH+PI L+GG T  IGDPS + E R++   ++I +N+E ++        +  G + A
Sbjct: 69  QNAGHRPIILVGGATGTIGDPSGKKEERQLQSMEQISKNVESLRVQLGKIFDF-EGDSAA 127

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            M+NN  W   +  +D LR+ G  F+VN MLS + V SRL  E  +SF EF Y ILQA D
Sbjct: 128 SMVNNYDWTKDVSILDFLRDYGKEFNVNTMLSKDIVASRL--EVGISFTEFAYQILQAMD 185

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTL 241
           F  L +  DCRLQ+GGSDQWGNI  G+DL  + +    K F LT PLLT A GTK GK+ 
Sbjct: 186 FNHLYEFNDCRLQIGGSDQWGNITAGLDLIRKKQGENAKAFGLTIPLLTKADGTKFGKSE 245

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAK 299
            GAIWLN E T+PY F+Q+W N DD DVV + K  T L  +EID +AK   +   +  A+
Sbjct: 246 GGAIWLNPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLTEAEIDELAKQVEEEPHLRAAQ 305

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRG 349
           K +A E+T  VH  E  E+A   +   F   + +          + +PT      EV+  
Sbjct: 306 KTLAAEMTKFVHSEEALEQALKISKALFSGDVTALTADEIEQGFKDVPTFVAEDAEVN-- 363

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
             L+  +V  G   S  +AR  + + AI IN     N +  I   D        +  GKK
Sbjct: 364 --LVDWLVSLGIEPSKRQAREDVTNGAIYINGERQQNVEKVIDASDRIENKFTIVRRGKK 421

Query: 410 NHIIC 414
            + + 
Sbjct: 422 KYFLV 426


>gi|229112124|ref|ZP_04241667.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus Rock1-15]
 gi|228671447|gb|EEL26748.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus Rock1-15]
          Length = 418

 Score =  497 bits (1281), Expect = e-138,   Method: Composition-based stats.
 Identities = 155/417 (37%), Positives = 227/417 (54%), Gaps = 11/417 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
             L  L  RG I+Q ++   L+ L  +  V  Y G+D TA SLH GH+  +++L   Q  
Sbjct: 2   GILQDLEFRGLINQQTDAEGLEQLLEKESVKLYCGFDPTADSLHIGHMLPVLMLRRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI+L+GGGT +IGDPS +   R +     +    E IK   S+F+++      A M 
Sbjct: 62  GHQPIALVGGGTGMIGDPSGKKAERTLNTKDTVAYYTESIKNQLSNFLEFENVDNPATMA 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL S+  I  LR+IG  F +N ML+ ++V SRL  E  +SF EF+YMILQ+YDF+ 
Sbjct: 122 NNYDWLGSLDVISFLRDIGKNFGLNYMLAKDTVASRL--ETGISFTEFSYMILQSYDFLN 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGER-LKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           L + ++CRLQ+GGSDQWGNI  G++L  +  +  K F LT PL+T + GTK GKT  GAI
Sbjct: 180 LYQQHNCRLQIGGSDQWGNITAGLELIRKSEEDAKAFGLTIPLVTKSDGTKFGKTEGGAI 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIA 303
           WL+ E T+PY F+Q+W N DD DVV + K  T L   EI  + K   +  E   A+K + 
Sbjct: 240 WLDPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLSHEEILELEKQVAEAPEKRAAQKALG 299

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRGMGLLTLIV 357
           +E+T +VHG E  E+A   +   F  S+       I        S +  +    L+ L+V
Sbjct: 300 SEMTKLVHGEEALEQAIKISAALFSGSVAELTASEIEQGFKDVPSVERTAEDTVLIDLLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           ++  + S  +AR  + + AI +N          +  +D        +  GKK + + 
Sbjct: 360 ESKISPSKRQAREDVTNGAIYVNGERTQALDYVVTEKDRIEGKFTIIRRGKKKYFLI 416


>gi|85059426|ref|YP_455128.1| tyrosyl-tRNA synthetase [Sodalis glossinidius str. 'morsitans']
 gi|97202004|sp|Q2NT02|SYY_SODGM RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|84779946|dbj|BAE74723.1| tyrosyl-tRNA synthase [Sodalis glossinidius str. 'morsitans']
          Length = 424

 Score =  497 bits (1281), Expect = e-138,   Method: Composition-based stats.
 Identities = 153/419 (36%), Positives = 226/419 (53%), Gaps = 9/419 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG I Q+++ + L    + G +  Y G+D TA SLH GHL  L+ L   Q 
Sbjct: 4   SNLIQQLQERGLIAQVTDEKALAERLAAGPIALYCGFDPTADSLHLGHLVPLLCLKRFQL 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+P++L+GG T +IGDPSF+   R++  ++ +QE +EKIK   S F+ +  G   A+ 
Sbjct: 64  AGHRPVALVGGATGLIGDPSFKATERKLNTAETVQEWVEKIKRQVSPFLDFDCGDNSAVA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYDF 184
            NN  W  S+  +  L +IG  FSVN+M++ E+V+ RL R+   +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGSMNVLTFLLDIGKHFSVNQMINKEAVKQRLNRDDSGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K Y   LQ+GGSDQWGNI  GIDL  RL    ++ LT PL+T A GTK GKT  GA
Sbjct: 184 ACLNKQYGVALQIGGSDQWGNITSGIDLTRRLHQNTVYGLTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINEAKKII 302
           +WL+   TSPY F+Q+W N  D+DV  F K  T L ++ ID + +      +   A+ ++
Sbjct: 244 VWLDPSKTSPYKFYQFWINTADSDVYLFLKFFTFLDLAAIDALEQEDRASDKAPRAQYVL 303

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTLI 356
           A E+T MVHG +    A       F  ++          +    +    + R   L   +
Sbjct: 304 AEEVTRMVHGEQGLAAAKRITASLFSGALADLTEDDFAQLAQDGMPTVHLERVADLQQAL 363

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           V A    S  +AR  + SNA+ +N    ++        D   +    L  GKK++ + +
Sbjct: 364 VAAELVPSRGQARTLISSNAVSVNGEKQASIDYVFDDADRLYSRYTLLRRGKKHYCLLN 422


>gi|268592621|ref|ZP_06126842.1| tyrosine--tRNA ligase [Providencia rettgeri DSM 1131]
 gi|291311759|gb|EFE52212.1| tyrosine--tRNA ligase [Providencia rettgeri DSM 1131]
          Length = 424

 Score =  497 bits (1280), Expect = e-138,   Method: Composition-based stats.
 Identities = 152/415 (36%), Positives = 221/415 (53%), Gaps = 11/415 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           ++ +  L ERG + Q+++   L    +QG ++ Y G+D TA SLH GHL  L+ L   Q 
Sbjct: 4   NNLIKQLQERGLVAQVTDEDALAERLAQGPISLYCGFDPTADSLHLGHLVPLLCLKRFQL 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++  ++ +QE +EKI+   S F+ +  G   A +
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKATERKLNTTETVQEWVEKIRNQVSPFLSFDCGDNSARL 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYDF 184
            NN  W   +  +  LR+IG  FSVN+M++ ESV+ RL R+   +SF EF Y +LQ YDF
Sbjct: 124 ANNYDWFGKMDVLTFLRDIGKHFSVNQMINRESVKQRLNRDDVGISFTEFAYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             + K     LQ+GGSDQWGNI  GIDL  RL   ++F +T PL+T A GTK GKT  GA
Sbjct: 184 ANMNKEMGVELQIGGSDQWGNITSGIDLTRRLHQNQVFGMTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKI 301
           +WL+ + TS Y F+Q+W N  DADV  F K  T + + EI   +   K  GK    A+ +
Sbjct: 244 VWLDSKKTSQYKFYQFWINTADADVYRFLKFFTFMELDEINALEEEDKNSGKAPR-AQYV 302

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTL 355
           +A  +T +VHG E    A       F  ++        + +    +    +  G  L   
Sbjct: 303 LAELVTKLVHGEEGLAAAKRITESLFSGAVSDLTEADFEQLAQDGMPCITLEAGADLQQA 362

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
           +V +    S  +AR  + SNA+ IN    +         D        +  GKKN
Sbjct: 363 LVDSELVPSRGQARTTISSNAVSINGQKQTEPMYVFSDADRLFGRYTLIRRGKKN 417


>gi|71908788|ref|YP_286375.1| tyrosyl-tRNA synthetase [Dechloromonas aromatica RCB]
 gi|97201327|sp|Q47B76|SYY_DECAR RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|71848409|gb|AAZ47905.1| tyrosyl-tRNA synthetase [Dechloromonas aromatica RCB]
          Length = 424

 Score =  497 bits (1280), Expect = e-138,   Method: Composition-based stats.
 Identities = 167/425 (39%), Positives = 232/425 (54%), Gaps = 19/425 (4%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           ++S  +  L +RG I QI++   LD L ++  VT Y G+D TA SLH GHL  +++L   
Sbjct: 2   YQSPLIQDLHDRGLIAQITDAAALDKLLTEESVTLYCGFDPTADSLHLGHLVPVLILKRF 61

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q+ GHKPI+L+GG T +IGDPSF+   R++     I   + KI+G    F+K+  G   A
Sbjct: 62  QEAGHKPIALVGGATGMIGDPSFKATERKLNTPDVIASWVGKIRGQVEPFLKF-DGANAA 120

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAY 182
           +M NN  W   +  ++ +R+IG  FSVN M+  ESV+ RL RE Q +S+ EF+Y +LQ Y
Sbjct: 121 IMANNYDWFGGMNCLEFMRDIGKHFSVNAMIKKESVQQRLTREDQGISYTEFSYSLLQGY 180

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DF EL K Y C LQ+GGSDQWGNI+ G DL  RL    +F LT PL+T A GTK GKT S
Sbjct: 181 DFAELNKRYGCVLQIGGSDQWGNIVAGTDLTRRLHQKHVFGLTLPLITKADGTKFGKTES 240

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINEAKK 300
           GAIWL+ + TSPY F+Q+W N  DADV  F    T LP++ I  +           EA++
Sbjct: 241 GAIWLDPKKTSPYAFYQFWLNTSDADVYKFMNFFTFLPVARIAEIEAADKASGTKPEAQR 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHS-----------QHMPTISISKDEVSRG 349
           I+A E T +VHG      A       F   +               MP + + K      
Sbjct: 301 ILAEEATRLVHGEVALMAARRITECLFSGQLADLTENDLEQLAQDGMPGVQLEKS----N 356

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
            GL+  +V +G A S +EAR  ++S ++ IN +        I   +        L  GKK
Sbjct: 357 TGLIDALVASGLAKSKSEARTFIQSGSVAINGNKAEALDHAIGGDELLYGRFTILRRGKK 416

Query: 410 NHIIC 414
           N+ + 
Sbjct: 417 NYGLI 421


>gi|320547858|ref|ZP_08042142.1| tyrosine--tRNA ligase [Streptococcus equinus ATCC 9812]
 gi|320447618|gb|EFW88377.1| tyrosine--tRNA ligase [Streptococcus equinus ATCC 9812]
          Length = 418

 Score =  497 bits (1280), Expect = e-138,   Method: Composition-based stats.
 Identities = 149/420 (35%), Positives = 228/420 (54%), Gaps = 17/420 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L ERG + Q ++   L    ++G V+ Y GYD TA SLH GHL  ++    LQ  
Sbjct: 2   NIFEELKERGLVFQTTDEEALVKALTEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP +L+GG T +IGDPSF+D  R +   + +   + KI+   S F+ +  G   A+M+
Sbjct: 62  GHKPYALVGGATGLIGDPSFKDAERSLQTKETVDGWVVKIQNQLSRFLDFENGDNKAVMV 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W  +I +ID LR++G +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF E
Sbjct: 122 NNYDWFGNISFIDFLRDVGKYFTVNAMMSKESVKKRI--ETGISYTEFAYQIMQGYDFYE 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L   Y+  LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+W
Sbjct: 180 LNDKYNVTLQIGGSDQWGNMTAGTELLRRKADKTGHVMTVPLITDATGKKFGKSEGNAVW 239

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIAT 304
           L+ + TSPY  +Q+W N+ D D V F K  T L + EI  + K      +E  A+KI+A 
Sbjct: 240 LDADKTSPYEMYQFWLNVMDDDAVRFLKIFTFLSLDEIAEIEKEFNAARHERLAQKILAR 299

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLT 354
           E+ T+VHG E  ++A     + F  +I S           ++P  ++ +D+      ++ 
Sbjct: 300 EVVTLVHGEEAYKEALKITEQLFAGNIKSLSAKELKQGLNNVPNYAVQEDD---NRNIVE 356

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           ++V A  + S  +AR  +++ AI IN   I +    +   D        +  GKK + + 
Sbjct: 357 MLVAAKISPSKRQAREDVQNGAIYINGERIQDLDYTLSDDDKIDNELTVIRRGKKKYFVL 416


>gi|126725366|ref|ZP_01741208.1| tyrosyl-tRNA synthetase [Rhodobacterales bacterium HTCC2150]
 gi|126704570|gb|EBA03661.1| tyrosyl-tRNA synthetase [Rhodobacterales bacterium HTCC2150]
          Length = 416

 Score =  497 bits (1280), Expect = e-138,   Method: Composition-based stats.
 Identities = 212/412 (51%), Positives = 283/412 (68%), Gaps = 2/412 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KS+F+ ++ +RGF+   ++ + LD    +GVV AYIG+D TASSLH G L Q+M+L WLQ
Sbjct: 6   KSEFMRVMMQRGFLADCTDYQALDDALLEGVVPAYIGFDATASSLHVGSLIQIMMLRWLQ 65

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           KTGHKPI LMGGGT+ +GDPSFR + R ++  ++I ENI  I+ +F+S++++G   TDA 
Sbjct: 66  KTGHKPIVLMGGGTTKVGDPSFRADERPLLTPEKIDENIAGIRKVFTSYVQFGDEPTDAK 125

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           +LNN  WL  + Y+D LR+IG  FSVNRML+FESV+SRL REQSLSFLEFNYMILQAYDF
Sbjct: 126 ILNNAEWLDGLNYLDFLRDIGRHFSVNRMLAFESVKSRLDREQSLSFLEFNYMILQAYDF 185

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL + Y C LQMGGSDQWGNI+ GIDL  R+   ++F LTSPLLTT+ G KMGK+L GA
Sbjct: 186 LELNRRYGCLLQMGGSDQWGNIVNGIDLTRRVLDHQIFGLTSPLLTTSDGKKMGKSLDGA 245

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WLN +M SPY FWQ+WRN  DADV  F K  T + + E DR+  L G EIN AK ++A 
Sbjct: 246 VWLNPDMRSPYEFWQFWRNTTDADVGRFLKLYTEIDVEECDRLGALDGAEINAAKVVLAN 305

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
            +TT+ HG E A  A   A E F+       +PTIS++  ++  G+ ++ L VK+G + S
Sbjct: 306 AVTTLAHGAEAAAAAEATAREVFEKGGVGDDLPTISLTAADIGDGISIVQLFVKSGLSKS 365

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             +A+R +  N  K+N++ I    + I + D      IKLS GKK H +  L
Sbjct: 366 GKDAKRLIAENGAKMNDADIDGAGVLITVADLVEP--IKLSAGKKRHALVTL 415


>gi|257470783|ref|ZP_05634873.1| tyrosyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185]
 gi|317064988|ref|ZP_07929473.1| tyrosyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185]
 gi|313690664|gb|EFS27499.1| tyrosyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185]
          Length = 406

 Score =  497 bits (1280), Expect = e-138,   Method: Composition-based stats.
 Identities = 175/410 (42%), Positives = 257/410 (62%), Gaps = 7/410 (1%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +   +L  RG++ Q ++  E+  +  +  VT YIG+D TA SLH GH   +M +  +QK 
Sbjct: 3   NVFDVLVGRGYLKQFTHEEEMREILGKEKVTFYIGFDPTADSLHVGHFIAMMFMSHMQKH 62

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI+L+GGGT++IGDPS R + R MM  + I  N+  IK     FI +  GK  A++ 
Sbjct: 63  GHRPIALLGGGTAMIGDPSGRTDMRTMMSKETIAHNVASIKKQMEKFIDFSDGK--AILE 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  + Y+D +R+IG+ FSVNRML+ E  +SR+  E  LSFLEFNYM++Q YDF+ 
Sbjct: 121 NNADWLLGLNYVDFIRDIGAHFSVNRMLAAECFKSRM--EAGLSFLEFNYMLMQGYDFLV 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + + C +Q+GG DQW N+I G++L  + +  + FA+T  LLT + G KMGKT  GA+W
Sbjct: 179 LNQKHGCTMQLGGDDQWSNMIAGVELIRKKEQKQAFAMTCTLLTNSEGKKMGKTAKGALW 238

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           L+ E TSPY F+QYWRN+DDADV      LT +PM E+ R++ L+G EINEAKKI+A EI
Sbjct: 239 LDPEKTSPYEFYQYWRNVDDADVEKCLSLLTFIPMDEVKRLSALEGAEINEAKKILAFEI 298

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
           T M+HG EEA KA TAA   F       ++P++ I +  +  G GL+  +V+ G   + +
Sbjct: 299 TKMIHGEEEALKAKTAAEALFGGGQDMSNVPSVEIEESAL--GTGLVDFLVEKGILKTKS 356

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           E RR ++ N + + +S +++  + I  +   + G   +  GKK +    L
Sbjct: 357 EGRRLVQQNGLNVGDSKVTDFAMPITKE-LFTDGEFLVKIGKKKYHKVVL 405


>gi|84501152|ref|ZP_00999387.1| tyrosyl-tRNA synthetase [Oceanicola batsensis HTCC2597]
 gi|84391219|gb|EAQ03637.1| tyrosyl-tRNA synthetase [Oceanicola batsensis HTCC2597]
          Length = 417

 Score =  497 bits (1280), Expect = e-138,   Method: Composition-based stats.
 Identities = 205/413 (49%), Positives = 284/413 (68%), Gaps = 2/413 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KS+F++ + ERGFI   ++ + LD   ++G+VTAYIGYD TA SLH GHL  +M+L WLQ
Sbjct: 6   KSEFMATIMERGFIADCTDYQALDEALNKGMVTAYIGYDATAKSLHVGHLMNIMMLRWLQ 65

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           KTGH+PI+LMGGGT+ +GDPSFR + R ++   +I ENI  ++ +F+ ++ Y      AL
Sbjct: 66  KTGHQPITLMGGGTTKVGDPSFRADERPLLSPAQIGENIAGMQRVFAQYLDYDREANPAL 125

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           ML+N  WL  + Y++ LR+IG  FSVNRMLSFESV+SRL REQSLSFLEFNYMILQAYDF
Sbjct: 126 MLDNAEWLDGLNYLEFLRDIGRHFSVNRMLSFESVKSRLDREQSLSFLEFNYMILQAYDF 185

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL + +DC LQMGGSDQWGNI+ GIDL  R+   +++ LT+PLLTT+ G KMGK+ +GA
Sbjct: 186 LELNRRHDCLLQMGGSDQWGNIVNGIDLTRRVLDTEIYGLTTPLLTTSDGRKMGKSANGA 245

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WL+ EM SPY FWQ+WRN  DADV  F K  + LP+ E DR+  L G EIN+AK I+A 
Sbjct: 246 VWLSGEMLSPYEFWQFWRNSTDADVGRFLKIFSELPVEECDRLGALGGSEINDAKVILAN 305

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E TT++HG + A  A   A E F+       +PT+ ++  EV  G+ ++ L+V+ G A +
Sbjct: 306 EATTLLHGADAARTAEATAREVFEKGGIGGDLPTLELTTGEVGGGISVVQLLVRTGLART 365

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
             EA+R +  N  ++N++ +++  L +      +   +KLS GKK H +  L 
Sbjct: 366 GKEAKRLIADNGARLNDAPLTDAGLVLDDASLSAP--VKLSAGKKRHALVKLS 416


>gi|229129942|ref|ZP_04258908.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus BDRD-Cer4]
 gi|228653633|gb|EEL09505.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus BDRD-Cer4]
          Length = 418

 Score =  497 bits (1280), Expect = e-138,   Method: Composition-based stats.
 Identities = 154/418 (36%), Positives = 226/418 (54%), Gaps = 11/418 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
             L  L  RG I+Q ++   L+ L  +  V  Y G+D TA SLH GH+  +++L   Q  
Sbjct: 2   GILQDLEFRGLINQQTDAEGLEQLLEKESVKLYCGFDPTADSLHIGHMLPVLMLRRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI+L+GGGT +IGDPS +   R +     +    E IK   S+F+++      A M 
Sbjct: 62  GHQPIALVGGGTGMIGDPSGKKAERTLNTKDTVAYYTESIKNQLSNFLEFENVDNPATMA 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL ++  I  LR+IG  F +N ML+ ++V SRL  E  +SF EF+YMILQ+YDF+ 
Sbjct: 122 NNYDWLGNLDVISFLRDIGKNFGLNYMLAKDTVASRL--ETGISFTEFSYMILQSYDFLN 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGER-LKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           L +++ CRLQ+GGSDQWGNI  G++L  +  +  K F LT PL+T + GTK GKT  GAI
Sbjct: 180 LYQHHKCRLQIGGSDQWGNITAGLELIRKSEEDAKAFGLTIPLVTKSDGTKFGKTEGGAI 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIA 303
           WL+ E T+PY F+Q+W N DD DVV + K  T L   EI  + K   +  E   A+K + 
Sbjct: 240 WLDPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLSHEEILELEKQVAEAPEKRAAQKALG 299

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRGMGLLTLIV 357
           +E+T +VHG E  E+A   +   F  S+       I        S +  +    L+ L+V
Sbjct: 300 SEMTKLVHGEEALEQAIKISAALFSGSVAELTASEIEQGFKDVPSVERTAEDTVLIDLLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           ++  + S  +AR  + + AI +N          +   D        +  GKK + +  
Sbjct: 360 ESKISPSKRQAREDVTNGAIYVNGERTQALDYVVTENDRIEGKFTIIRRGKKKYFLIR 417


>gi|182419105|ref|ZP_02950359.1| tyrosyl-tRNA synthetase [Clostridium butyricum 5521]
 gi|237669225|ref|ZP_04529207.1| tyrosine--tRNA ligase [Clostridium butyricum E4 str. BoNT E BL5262]
 gi|182377060|gb|EDT74630.1| tyrosyl-tRNA synthetase [Clostridium butyricum 5521]
 gi|237655112|gb|EEP52670.1| tyrosine--tRNA ligase [Clostridium butyricum E4 str. BoNT E BL5262]
          Length = 406

 Score =  497 bits (1280), Expect = e-138,   Method: Composition-based stats.
 Identities = 178/411 (43%), Positives = 259/411 (63%), Gaps = 7/411 (1%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           ++ L  L ERG+I Q ++  E   L     +T YIG+D TA SLH GH   +M +  +QK
Sbjct: 2   ANVLDELLERGYIKQFTHEEETRRLLENEKITFYIGFDPTADSLHVGHFIAMMFMAHMQK 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+PI+L+GGGT++IGDPS + + R+MM  + IQ N++ IK     FI +   K  AL+
Sbjct: 62  AGHRPIALIGGGTAMIGDPSGKTDMRQMMTKETIQHNVDSIKKQMERFIDFSDDK--ALI 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  WL ++ Y+D LRE+G  FSVNRML+ E  + RL  E+ LSFLEFNYM++Q YDF 
Sbjct: 120 VNNADWLLNLNYVDFLREVGVHFSVNRMLTAECFKQRL--EKGLSFLEFNYMLMQGYDFY 177

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L + Y+C++++GG DQW N+I G++L  R    +  A+T  LLT + G KMGKT+ GA+
Sbjct: 178 VLNQQYNCKMELGGDDQWSNMIAGVELVRRKAQGQAMAMTCTLLTNSQGQKMGKTVGGAL 237

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
           WLN E TSPY+F+QYWRN+DDADV      LT LPM E+ R+  L+G EIN AKK++A E
Sbjct: 238 WLNPEKTSPYDFYQYWRNVDDADVEKCLALLTFLPMDEVRRLGALEGAEINNAKKVLAFE 297

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           +T +VHG EEA+KA  AA   F       ++PT+SI+K+E+  G  ++ ++       S 
Sbjct: 298 VTKLVHGEEEAKKAEEAATALFAGGADMSNVPTVSITKEEL--GSSIIDIMASTKILPSK 355

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            E RR ++   + +N   +++    +  +DF+  G   +  GKKN+    +
Sbjct: 356 KEGRRLVEQGGLSLNGEKVTDVSRVLTEEDFE-DGIALIKRGKKNYNKIEI 405


>gi|229492662|ref|ZP_04386463.1| tyrosyl-tRNA synthetase [Rhodococcus erythropolis SK121]
 gi|229320321|gb|EEN86141.1| tyrosyl-tRNA synthetase [Rhodococcus erythropolis SK121]
          Length = 429

 Score =  497 bits (1279), Expect = e-138,   Method: Composition-based stats.
 Identities = 145/421 (34%), Positives = 225/421 (53%), Gaps = 13/421 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + L  L+ RG I Q ++   L      G VT Y G+D T  SLHAGHL  L+ L   Q+ 
Sbjct: 8   NILDELTWRGLIAQSTDLDALRKDLEAGPVTLYAGFDPTGPSLHAGHLVPLLALKRFQRA 67

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           G++PI L GG T +IGDP    E R M  +  + +   +I+G    F+ +    T A++ 
Sbjct: 68  GNRPIVLAGGATGLIGDPRDVGE-RTMNSADTVADWAGRIRGQLERFVDFDDSPTSAVIE 126

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   +  ID LR++G  FSVN ML+ ++V+ RL+ +  +S+ EF+YM+LQA D++ 
Sbjct: 127 NNMNWTGKMSAIDFLRDVGKHFSVNVMLARDTVKRRLESD-GMSYTEFSYMLLQANDYLH 185

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT-LSGAI 245
           L ++  C LQ+GGSDQWGNII G++L  R+    + A+T PL+T+A G K GK+   G++
Sbjct: 186 LRRDLGCTLQVGGSDQWGNIIAGVELNRRVDGESVHAMTVPLVTSADGKKFGKSTGGGSL 245

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIA 303
           WL+ EMTSPY ++QY+ N  DADV+ + +  T L   E+     A  +     EA+K +A
Sbjct: 246 WLDPEMTSPYAWYQYFVNTGDADVIKYLRWFTFLTADELAELETATAERPHAREAQKRLA 305

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQ--------HMPTISISKDEVSRGMGLLTL 355
            E+TT+VHG         A+   F  +  ++         +   S+S+        ++ L
Sbjct: 306 AEMTTLVHGEHNTRAVELASQALFGKAELAELDESTLAAALKEASVSELAPGEPRTIIDL 365

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +V +G   S   ARR +K     +NN  +S +  +    D      + +  GK+N     
Sbjct: 366 LVTSGLCESKGAARRAVKEGGASVNNQKVSADDWEPTASDLLHGSWLVVRRGKRNFAGVK 425

Query: 416 L 416
           +
Sbjct: 426 I 426


>gi|116873028|ref|YP_849809.1| tyrosyl-tRNA synthetase [Listeria welshimeri serovar 6b str.
           SLCC5334]
 gi|123463834|sp|A0AJ48|SYY_LISW6 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|116741906|emb|CAK21030.1| tyrosyl-tRNA synthetase [Listeria welshimeri serovar 6b str.
           SLCC5334]
          Length = 419

 Score =  497 bits (1279), Expect = e-138,   Method: Composition-based stats.
 Identities = 157/422 (37%), Positives = 220/422 (52%), Gaps = 21/422 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG I+Q ++   L     +  ++ Y G D +  S+H GHL   M+L   Q  
Sbjct: 2   NIIDELEWRGAIYQQTDEEGLRKWVEEKQISLYCGIDPSGDSMHIGHLIPFMILRRFQNA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI L+GG T  IGDPS + E R++   ++I  N+E ++        +  G + A M+
Sbjct: 62  GHRPIILVGGATGTIGDPSGKKEERKLQSMEQISRNVESLRVQLGKIFDF-EGDSAASMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   +  +D LR+ G  F+VN MLS + V SRL  E  +SF EF Y ILQA DF  
Sbjct: 121 NNYDWTKDVSILDFLRDYGKEFNVNTMLSKDIVASRL--EVGISFTEFAYQILQAMDFNH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSGA 244
           L +  DCRLQ+GGSDQWGNI  G+DL  + +    K F LT PLLT A GTK GK+  GA
Sbjct: 179 LYEFNDCRLQIGGSDQWGNITAGLDLIRKKQGENAKAFGLTIPLLTKADGTKFGKSEGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKII 302
           IWLN E T+PY F+Q+W N DD DVV + K  T L  +EID +AK   +   +  A+K +
Sbjct: 239 IWLNPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLTETEIDELAKKVEEEPHLRAAQKTL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGL 352
           A E+T  VH  E  E+A   +   F   + +          + +PT      EV+    L
Sbjct: 299 AAEMTKFVHSEEALEQALKISKALFSGDVTALTADEIEQGFKDVPTFVAEDAEVN----L 354

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           +  +V  G   S  +AR  + + AI IN     N +  I   D        +  GKK + 
Sbjct: 355 VDWLVSLGIEPSKRQAREDVTNGAIYINGERQQNVEKVIDASDRIENKFTIVRRGKKKYF 414

Query: 413 IC 414
           + 
Sbjct: 415 LV 416


>gi|42520919|ref|NP_966834.1| tyrosyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           melanogaster]
 gi|58698303|ref|ZP_00373220.1| tyrosyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           ananassae]
 gi|225630967|ref|YP_002727758.1| Tyrosyl-tRNA synthetase [Wolbachia sp. wRi]
 gi|81652226|sp|Q73G50|SYY_WOLPM RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|254765189|sp|C0R4X5|SYY_WOLWR RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|42410660|gb|AAS14768.1| tyrosyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           melanogaster]
 gi|58535176|gb|EAL59258.1| tyrosyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           ananassae]
 gi|225592948|gb|ACN95967.1| Tyrosyl-tRNA synthetase [Wolbachia sp. wRi]
          Length = 416

 Score =  497 bits (1279), Expect = e-138,   Method: Composition-based stats.
 Identities = 210/412 (50%), Positives = 291/412 (70%), Gaps = 2/412 (0%)

Query: 6   SDFLSILSERGFIHQISNPRELDILC-SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           S+FL+ + ERG+++Q +N   LD L      + AYIG+D TA SLHAGHL Q+M+L  LQ
Sbjct: 5   SEFLNFIQERGYLYQCTNIEGLDQLLLQSNYIVAYIGFDCTAPSLHAGHLIQIMMLCHLQ 64

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           K G+KPI L+GGGT+ IGDPSF+D++R ++  + I +N   I+ I    + +   KT A+
Sbjct: 65  KFGYKPIVLLGGGTTKIGDPSFKDKARSILPVENINQNTSSIRRILEKMVSFNDSKTGAM 124

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           ++NN  WL +IKYID LR+IG++FSVNRMLSF+SV++RL REQ+LSFLEFNYM+LQAYDF
Sbjct: 125 IVNNADWLDNIKYIDFLRDIGAYFSVNRMLSFDSVKTRLDREQTLSFLEFNYMLLQAYDF 184

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL K YDCRLQ+GGSDQWGNI+ GI+LG++L  P+LF LT PLL  A G KMGKT SGA
Sbjct: 185 IELNKKYDCRLQIGGSDQWGNIVNGIELGKKLNLPELFGLTMPLLLNAQGKKMGKTESGA 244

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WL+  M  PY++WQY+RN+DD DV  F + LT +P+ EI ++  L+ +EINEAKK++AT
Sbjct: 245 VWLDDNMLKPYDYWQYFRNVDDQDVGRFLRLLTDVPIDEIRKLESLKDQEINEAKKVLAT 304

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E+T + HG +EAE A  AA+  F+ +  S  +P   I K++V+ G+ L+ L+   GF  S
Sbjct: 305 EVTKICHGDKEAELAQFAAISAFE-NEDSSLLPDYIIKKEQVASGISLVDLLHDTGFEPS 363

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
              A+R ++ N  KIN+++++N    I  + F     IKLS GKK HI   +
Sbjct: 364 KGAAKRLIQGNGCKINDNVVNNIDHVINFESFKDQPFIKLSAGKKRHIKVVV 415


>gi|300722839|ref|YP_003712132.1| tyrosine tRNA synthetase [Xenorhabdus nematophila ATCC 19061]
 gi|297629349|emb|CBJ89948.1| tyrosine tRNA synthetase [Xenorhabdus nematophila ATCC 19061]
          Length = 427

 Score =  497 bits (1279), Expect = e-138,   Method: Composition-based stats.
 Identities = 157/426 (36%), Positives = 229/426 (53%), Gaps = 14/426 (3%)

Query: 1   MPAFKS--DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLM 58
           M +  S  + +  L ERG + Q+++   L    +QG V+ Y G+D TA SLH GHL  L+
Sbjct: 1   MESLMSSNNLIKQLQERGLVAQVTDEEALAERLTQGPVSLYCGFDPTADSLHLGHLVPLL 60

Query: 59  LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT 118
            L   Q  GHKPI+L+GG T +IGDPSF+   R++   + ++E + KI+   S F+ +  
Sbjct: 61  CLKRFQLAGHKPIALVGGATGLIGDPSFKATERKLNTEETVKEWVAKIRKQVSPFLSF-D 119

Query: 119 GKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYM 177
           G+  A + NN  W   +  +  LR+IG  FSVN+M++ E+V+ RL R+   +S+ EF+Y 
Sbjct: 120 GENGAELANNYDWFGEMDVLAFLRDIGKHFSVNQMINKEAVKQRLNRDDVGISYTEFSYN 179

Query: 178 ILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
           +LQ+YDF  L   Y   LQ+GGSDQWGNI  GIDL  RL   ++F +T PL+T + GTK 
Sbjct: 180 LLQSYDFANLNGKYGVELQIGGSDQWGNITSGIDLTRRLHQKQVFGMTVPLITKSDGTKF 239

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKE 294
           GKT  GA+WL+ + TSPY F+Q+W N  DADV  F K  T + + EI   +   K  GK 
Sbjct: 240 GKTEGGAVWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMDIEEINVLEEEDKNSGKA 299

Query: 295 INEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSR 348
              A+ ++A ++T +VHG E    A       F  +I          +    +   E+ +
Sbjct: 300 PR-AQYVLAEQVTGLVHGEEGLAAAKRITESLFSGAIADLTEDDFAQLAQDGMPAIELEK 358

Query: 349 GMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGK 408
              L   +V A F  S  +AR  + SNA+ IN    S         D        L  GK
Sbjct: 359 DADLQQALVIAEFVPSRGQARTMISSNAVSINGEKQSEPMHVFTDGDRLFGRYTLLRRGK 418

Query: 409 KNHIIC 414
           K++ + 
Sbjct: 419 KHYCLI 424


>gi|182439471|ref|YP_001827190.1| putative tyrosyl-tRNA synthetase [Streptomyces griseus subsp.
           griseus NBRC 13350]
 gi|326780134|ref|ZP_08239399.1| Tyrosyl-tRNA synthetase [Streptomyces cf. griseus XylebKG-1]
 gi|254783640|sp|B1W1W0|SYY_STRGG RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|178467987|dbj|BAG22507.1| putative tyrosyl-tRNA synthetase [Streptomyces griseus subsp.
           griseus NBRC 13350]
 gi|326660467|gb|EGE45313.1| Tyrosyl-tRNA synthetase [Streptomyces cf. griseus XylebKG-1]
          Length = 423

 Score =  497 bits (1279), Expect = e-138,   Method: Composition-based stats.
 Identities = 147/420 (35%), Positives = 230/420 (54%), Gaps = 11/420 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +D +  L  RG   Q ++   L    + G VT Y G+D TA+SLH GHL Q++ +  LQ+
Sbjct: 2   TDIVDELKWRGLFAQSTDEDALRKALADGPVTFYCGFDPTAASLHVGHLVQVLTMRRLQQ 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            G KP++L+GG T  IGDP      R +   + I   +++++G    F+ +  G   A M
Sbjct: 62  AGLKPLALVGGATGQIGDPRP-TAERTLNDPETIAAWVQRLRGQIEPFLTF-EGPNAATM 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  W   +  I+ LR+IG  F VN+ML+ +SV  RL+ ++ +S+ EF+Y +LQ  DF+
Sbjct: 120 VNNLDWTAGMSAIEFLRDIGKHFRVNKMLTKDSVARRLESQEGISYTEFSYQLLQGMDFL 179

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASGTKMGKTLSGA 244
           EL + + C LQ GGSDQWGN+  GIDL  RL+    + AL +PL+T A GTK GK+ SGA
Sbjct: 180 ELYRRHGCTLQQGGSDQWGNLTAGIDLIHRLEPGAVVHALATPLMTKADGTKFGKSESGA 239

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKII 302
           +WL+ EMT+PY F+Q+W N+DD DV  + + L+     E+  + KL  +  +   A++ +
Sbjct: 240 VWLDPEMTTPYAFYQFWLNVDDRDVSRYLRILSFKSREELAELEKLTEERPQARNAQRAL 299

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQ------HMPTISISKDEVSRGMGLLTLI 356
           A E+TT+VHG E+      A+   F     ++            +    V+    L+ L+
Sbjct: 300 AEELTTLVHGGEQCAAVIAASKALFGQGDLAELDEATLSAALSEVPHATVAELGPLVDLL 359

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V+ G A S + ARR +K     +NN  + + ++     +      + L  GKKN     +
Sbjct: 360 VEVGLAPSKSGARRTVKEGGAYVNNVKVVDGEVAPDAGELLHGRWLVLRRGKKNLAAVEV 419


>gi|307710186|ref|ZP_07646630.1| tyrosyl-tRNA synthetase [Streptococcus mitis SK564]
 gi|307619166|gb|EFN98298.1| tyrosyl-tRNA synthetase [Streptococcus mitis SK564]
          Length = 418

 Score =  497 bits (1279), Expect = e-138,   Method: Composition-based stats.
 Identities = 153/419 (36%), Positives = 228/419 (54%), Gaps = 17/419 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L ERG I Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  G
Sbjct: 3   IFDELKERGLIFQTTDEEALRKALEEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKP +L+GG T +IGDPSF+D  R +     +   ++ I+G  S F+ +  G+  A+M+N
Sbjct: 63  HKPYALVGGATGLIGDPSFKDAERSLQTKDTVNGWVKSIQGQLSRFLDFENGENKAVMVN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W  SI +ID LR+IG +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF  L
Sbjct: 123 NYDWFGSISFIDFLRDIGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFFVL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            ++++  LQ+GGSDQWGN+  G +L  R      + +T PL+T A+G K GK+   A+WL
Sbjct: 181 NQDHNVTLQIGGSDQWGNMTAGTELLRRKADKTGYVITVPLITDATGKKFGKSEGNAVWL 240

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATE 305
           N E TSPY  +Q+W N+ DAD V F K  T L + EI+ + K      +E  A+K++A E
Sbjct: 241 NPEKTSPYEMYQFWMNVMDADAVRFLKIFTFLSLDEIEDIRKQFEAAPHERLAQKVLARE 300

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTL 355
           + T+VHG E  ++A     + F  +I +            +P   +  DE      ++ L
Sbjct: 301 VVTLVHGEEAYKEALNITEQLFAGNIKNLSVKELKQGLLGVPNYHVQADE---DHNIVEL 357

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +V +G   S  +AR  +++ AI +N   I N    +   D        +  GKK + + 
Sbjct: 358 LVSSGVVNSKRQAREDVQNGAIYVNGDRIQNLDYVLSDADKLENELTVIRRGKKKYFVL 416


>gi|56479945|ref|NP_707537.2| tyrosyl-tRNA synthetase [Shigella flexneri 2a str. 301]
 gi|110805610|ref|YP_689130.1| tyrosyl-tRNA synthetase [Shigella flexneri 5 str. 8401]
 gi|81723368|sp|Q83KY0|SYY_SHIFL RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|122366541|sp|Q0T4E0|SYY_SHIF8 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|56383496|gb|AAN43244.2| tyrosine tRNA synthetase [Shigella flexneri 2a str. 301]
 gi|110615158|gb|ABF03825.1| tyrosine tRNA synthetase [Shigella flexneri 5 str. 8401]
          Length = 424

 Score =  497 bits (1279), Expect = e-138,   Method: Composition-based stats.
 Identities = 151/419 (36%), Positives = 230/419 (54%), Gaps = 11/419 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 4   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +QE ++KI+   + F+ +  G+  A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDCGENSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDF 184
            NN  W  ++  +  LR+IG  FSVN+M++ E+V+ RL RE + +S  EF+Y + Q YD+
Sbjct: 124 ANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNREDEGMSITEFSYNLQQGYDW 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L  +Y   LQ+GGSDQ  NI   IDL  RL    +  L  PL+T   GTK GKT  GA
Sbjct: 184 TCLNTHYYVELQIGGSDQRWNITSEIDLTRRLHQNHVLGLPDPLITNGDGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI   +   K  GK    A+ +
Sbjct: 244 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINALEEEDKNSGKAPR-AQYV 302

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTL 355
           +A ++T +VHG E  + A       F  S+ +      + +    +   E+ +G  L+  
Sbjct: 303 LAEQVTRLVHGEEGLQAAKRITECLFSGSLSALSEADFEQLAQDGVPMVEMEKGADLMQA 362

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +V +    S  +AR+ + SNAI IN    S+ +   K +D        L  GKKN+ + 
Sbjct: 363 LVDSELQPSRGQARKTIASNAITINGEKQSDPEYFFKEEDRLFGRFTLLRRGKKNYCLI 421


>gi|260655484|ref|ZP_05860972.1| tyrosine--tRNA ligase [Jonquetella anthropi E3_33 E1]
 gi|260629932|gb|EEX48126.1| tyrosine--tRNA ligase [Jonquetella anthropi E3_33 E1]
          Length = 427

 Score =  497 bits (1279), Expect = e-138,   Method: Composition-based stats.
 Identities = 163/421 (38%), Positives = 235/421 (55%), Gaps = 11/421 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +D L  L ERG++   S+   L+ L  +G VTAY+G+D TA SLH GHL  LM L WLQK
Sbjct: 2   NDALKTLRERGYVDWCSDEEGLNALFEKGQVTAYVGFDPTADSLHVGHLIPLMGLAWLQK 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+PI L GGGT +IGDPS + + R ++  ++++ N+E IK   S  + +  G   AL+
Sbjct: 62  LGHRPILLAGGGTGMIGDPSMKSKERNLLSDEQVRRNVEGIKVQLSRLVDFDCGSASALL 121

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDF 184
           +NN  WL  +  ID LR++G FFSVN M+  E VRSR++   ++LS+ EF Y +LQAYDF
Sbjct: 122 VNNYDWLGKLNLIDFLRDVGKFFSVNYMIRKEHVRSRIEDPNKTLSYTEFTYTLLQAYDF 181

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K + CRLQMGG+DQ GN++ GI+L  +      +A T+PLL  +SGTK GKT  GA
Sbjct: 182 WHLFKTFGCRLQMGGNDQQGNLVSGIELIRKWDGETAYAATNPLLLNSSGTKFGKTEGGA 241

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKII 302
           +WL+ E TSPY F+Q+W N +D  V    K  T LP+ EID++            A++ +
Sbjct: 242 VWLSPEKTSPYKFYQFWMNSEDEAVEKLLKLFTFLPLEEIDQIVAEHQANPGRRAAQRRL 301

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHM--PTISISKDEVSRG------MGLLT 354
           A EIT+++HG E A+ A  A+   F   +    +  P +SI   E   G        L  
Sbjct: 302 ALEITSIIHGEEAAKAAQRASEILFGGQVAHDELTGPMLSIIASETEGGSIESLPCQLAE 361

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +V +G   S  E +R      + +N   +     ++   D     +  +  GKK +   
Sbjct: 362 ALVASGACASKGEVKRLTSGGGLYLNGDRVETSDRELTESDLLDGKHALVRLGKKKYFTL 421

Query: 415 H 415
            
Sbjct: 422 R 422


>gi|229147228|ref|ZP_04275585.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus BDRD-ST24]
 gi|228636237|gb|EEK92710.1| Tyrosyl-tRNA synthetase 1 [Bacillus cereus BDRD-ST24]
          Length = 418

 Score =  496 bits (1278), Expect = e-138,   Method: Composition-based stats.
 Identities = 155/418 (37%), Positives = 225/418 (53%), Gaps = 11/418 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
             L  L  RG I+Q ++   L+ L  +  V  Y G+D TA SLH GH+  +++L   Q  
Sbjct: 2   GILQDLEFRGLINQQTDAEGLEQLLEKESVKLYCGFDPTADSLHIGHMLPVLMLRRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI+L+GGGT +IGDPS +   R +     +    E IK   S+F+++      A M 
Sbjct: 62  GHQPIALVGGGTGMIGDPSGKKAERTLNTKDTVAYYTESIKNQLSNFLEFENVDNPATMA 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL S+  I  LR+IG  F +N ML+ ++V SRL  E  +SF EF+YMILQ+YDF+ 
Sbjct: 122 NNYDWLGSLDVISFLRDIGKNFGLNYMLAKDTVASRL--ETGISFTEFSYMILQSYDFLN 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGER-LKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           L + ++CRLQ+GGSDQWGNI  G++L  +  +  K F LT PL+T + GTK GKT  GAI
Sbjct: 180 LYQQHNCRLQIGGSDQWGNITAGLELIRKSEEDAKAFGLTIPLVTKSDGTKFGKTEGGAI 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIA 303
           WL+ E T+PY F+Q+W N DD DVV + K  T L   EI  + K   +  E   A+K + 
Sbjct: 240 WLDPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLSHEEILELEKQVAEAPEKRAAQKALG 299

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRGMGLLTLIV 357
            E+T +VHG E  E+A   +   F  S+       I        S +  +    L+ L+V
Sbjct: 300 AEMTKLVHGEEALEQAIKISAALFSGSVAELTASEIEQGFKDVPSVERTAEDTVLIDLLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           ++  + S  +AR  + + AI +N          +   D        +  GKK + +  
Sbjct: 360 ESKISPSKRQAREDVTNGAIYVNGERTQVLDYVVTENDRIEGKFTIIRRGKKKYFLIR 417


>gi|258450877|ref|ZP_05698930.1| tyrosyl-tRNA synthetase [Staphylococcus aureus A5948]
 gi|257861413|gb|EEV84221.1| tyrosyl-tRNA synthetase [Staphylococcus aureus A5948]
          Length = 420

 Score =  496 bits (1278), Expect = e-138,   Method: Composition-based stats.
 Identities = 148/421 (35%), Positives = 227/421 (53%), Gaps = 20/421 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            +  L  RG I+Q ++ + ++ L ++  VT Y G D TA SLH GHL   + L   Q+ G
Sbjct: 5   LIEDLKWRGLIYQQTDEQGIEDLLNKEQVTLYCGADPTADSLHIGHLLPFLTLRRFQEHG 64

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+PI L+GGGT +IGDPS + E R +   +++ +NIE I     +  ++GT    A+++N
Sbjct: 65  HRPIVLIGGGTGMIGDPSGKSEERVLQTEEQVDKNIEGISKQMHNIFEFGTDHG-AVLVN 123

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  I  I  LR+ G    VN ML  +S++SRL  E  +S+ EF Y ILQA DF  L
Sbjct: 124 NRDWLGQISLISFLRDYGKHVGVNYMLGKDSIQSRL--EHGISYTEFTYTILQAIDFGHL 181

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLG-ERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
            +  +C++Q+GGSDQWGNI  GI+L          + LT PL+T + G K GK+ SGA+W
Sbjct: 182 NRELNCKIQVGGSDQWGNITSGIELMRRMYGQTDAYGLTIPLVTKSDGKKFGKSESGAVW 241

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA--KLQGKEINEAKKIIAT 304
           L+ E TSPY F+Q+W N  D DV+ F K  T L   EIDR+   K +   + EA+K +A 
Sbjct: 242 LDAEKTSPYEFYQFWINQSDEDVIKFLKYFTFLGKEEIDRLEQSKNEAPHLREAQKTLAE 301

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLT 354
           E+T  +HG +    A   +   F   + S          + +P +++S D       ++ 
Sbjct: 302 EVTKFIHGEDALNDAIRISQALFSGDLKSLSAKELKGGFKDVPQVTLSNDT----TNIVE 357

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           ++++ G + S  +AR  + + AI IN     +    +  +D        +  GKK + + 
Sbjct: 358 VLIETGISPSKRQAREDVNNGAIYINGERQQDVNYALAPEDKIDGEFTIIRRGKKKYFMV 417

Query: 415 H 415
           +
Sbjct: 418 N 418


>gi|170705583|ref|ZP_02896047.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. A0389]
 gi|170129708|gb|EDS98571.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. A0389]
          Length = 418

 Score =  496 bits (1278), Expect = e-138,   Method: Composition-based stats.
 Identities = 153/418 (36%), Positives = 228/418 (54%), Gaps = 11/418 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
             L  L  RG I+Q ++   L+ L  +  V  Y G+D TA SLH GH+  +++L   Q  
Sbjct: 2   GILQDLEFRGLINQQTDAEGLEQLLEKESVKLYCGFDPTADSLHIGHMLPVLMLRRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI+L+GGGT +IGDPS +   R +     +    E IK   S+F+++   +  A M 
Sbjct: 62  GHQPIALVGGGTGMIGDPSGKKAERTLNTKDTVAYYTESIKNQLSNFLEFENVENPATMA 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           N+  WL ++  I  LR+IG  F +N ML+ ++V SRL  E  +SF EF+YMILQ+YDF+ 
Sbjct: 122 NSYDWLGNLDVISFLRDIGKNFGLNYMLAKDTVASRL--ETGISFTEFSYMILQSYDFLN 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGER-LKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           L ++++CRLQ+GGSDQWGNI  G++L  +  +  K F LT PL+T + GTK GKT  GAI
Sbjct: 180 LYQHHNCRLQIGGSDQWGNITAGLELIRKSEEDAKAFGLTIPLVTKSDGTKFGKTEGGAI 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIA 303
           WL+ E T+PY F+Q+W N DD DVV + K  T L   EI  + K   +  E   A+K + 
Sbjct: 240 WLDPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLSHEEILELEKQVAEAPEKRAAQKALG 299

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRGMGLLTLIV 357
            E+T +VHG E  E+A   +   F  S+       I        S +  +    L+ L+V
Sbjct: 300 AEMTKLVHGEEALEQAIKISAALFSGSVAELTASEIEQGFKDVPSVERTAEDTVLIDLLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           ++  + S  +AR  + + AI +N          +  +D        +  GKK + +  
Sbjct: 360 ESKISPSKRQAREDVTNGAIYVNGERTQALDYVVTEKDRIEGKFTIIRRGKKKYFLIR 417


>gi|15924719|ref|NP_372253.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu50]
 gi|15927306|ref|NP_374839.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus N315]
 gi|21283400|ref|NP_646488.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MW2]
 gi|49483969|ref|YP_041193.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|49486553|ref|YP_043774.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|82751316|ref|YP_417057.1| tyrosyl-tRNA synthetase [Staphylococcus aureus RF122]
 gi|87162035|ref|YP_494369.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|88195539|ref|YP_500345.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus NCTC
           8325]
 gi|148268207|ref|YP_001247150.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH9]
 gi|150394275|ref|YP_001316950.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH1]
 gi|151221834|ref|YP_001332656.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           Newman]
 gi|156980046|ref|YP_001442305.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu3]
 gi|161509944|ref|YP_001575603.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|221142363|ref|ZP_03566856.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           JKD6009]
 gi|253315098|ref|ZP_04838311.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           CF-Marseille]
 gi|255006514|ref|ZP_05145115.2| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Mu50-omega]
 gi|257425842|ref|ZP_05602266.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257428508|ref|ZP_05604906.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257431142|ref|ZP_05607519.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257433824|ref|ZP_05610182.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus E1410]
 gi|257436741|ref|ZP_05612785.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M876]
 gi|257794112|ref|ZP_05643091.1| tyrosyl-tRNA synthetase [Staphylococcus aureus A9781]
 gi|258415816|ref|ZP_05682087.1| tyrosyl-tRNA synthetase [Staphylococcus aureus A9763]
 gi|258420645|ref|ZP_05683584.1| tyrosyl-tRNA synthetase [Staphylococcus aureus A9719]
 gi|258438295|ref|ZP_05689579.1| tyrosyl-tRNA synthetase [Staphylococcus aureus A9299]
 gi|258443753|ref|ZP_05692092.1| tyrosyl-tRNA synthetase [Staphylococcus aureus A8115]
 gi|258445964|ref|ZP_05694140.1| tyrosyl-tRNA synthetase [Staphylococcus aureus A6300]
 gi|258448309|ref|ZP_05696436.1| tyrosyl-tRNA synthetase [Staphylococcus aureus A6224]
 gi|258454164|ref|ZP_05702135.1| tyrosyl-tRNA synthetase [Staphylococcus aureus A5937]
 gi|262049041|ref|ZP_06021919.1| tyrosyl-tRNA synthetase [Staphylococcus aureus D30]
 gi|262051808|ref|ZP_06024025.1| tyrosyl-tRNA synthetase [Staphylococcus aureus 930918-3]
 gi|269203367|ref|YP_003282636.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ED98]
 gi|282893223|ref|ZP_06301457.1| tyrosyl-tRNA synthetase [Staphylococcus aureus A8117]
 gi|282904298|ref|ZP_06312186.1| tyrosine--tRNA ligase [Staphylococcus aureus subsp. aureus C160]
 gi|282906123|ref|ZP_06313978.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282909039|ref|ZP_06316857.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282911354|ref|ZP_06319156.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282914523|ref|ZP_06322309.1| tyrosine--tRNA ligase [Staphylococcus aureus subsp. aureus M899]
 gi|282916989|ref|ZP_06324747.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus D139]
 gi|282919491|ref|ZP_06327226.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C427]
 gi|282924419|ref|ZP_06332092.1| tyrosyl-tRNA synthetase [Staphylococcus aureus A9765]
 gi|282924869|ref|ZP_06332535.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C101]
 gi|283770807|ref|ZP_06343699.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus H19]
 gi|283958478|ref|ZP_06375929.1| tyrosine--tRNA ligase [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|284024775|ref|ZP_06379173.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 132]
 gi|293503601|ref|ZP_06667448.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           58-424]
 gi|293510617|ref|ZP_06669322.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M809]
 gi|293537158|ref|ZP_06671838.1| tyrosine--tRNA ligase [Staphylococcus aureus subsp. aureus M1015]
 gi|294849890|ref|ZP_06790629.1| tyrosyl-tRNA synthetase [Staphylococcus aureus A9754]
 gi|295406039|ref|ZP_06815847.1| tyrosyl-tRNA synthetase [Staphylococcus aureus A8819]
 gi|295428298|ref|ZP_06820927.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|296276633|ref|ZP_06859140.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MR1]
 gi|297207559|ref|ZP_06923994.1| tyrosine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|297245035|ref|ZP_06928912.1| tyrosyl-tRNA synthetase [Staphylococcus aureus A8796]
 gi|297590739|ref|ZP_06949377.1| tyrosine--tRNA ligase [Staphylococcus aureus subsp. aureus MN8]
 gi|300911640|ref|ZP_07129084.1| tyrosine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH70]
 gi|304380679|ref|ZP_07363350.1| tyrosine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|81649151|sp|Q6G8J9|SYY_STAAS RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|81650917|sp|Q6GFX9|SYY_STAAR RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|81704346|sp|Q7A0M7|SYY_STAAW RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|81705530|sp|Q7A537|SYY_STAAN RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|81781424|sp|Q99TD5|SYY_STAAM RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|97202012|sp|Q2FG09|SYY_STAA3 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|97202017|sp|Q2YTG1|SYY_STAAB RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|123407035|sp|Q2FXJ5|SYY_STAA8 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|189029772|sp|A7X3G2|SYY_STAA1 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|189029773|sp|A6U2J5|SYY_STAA2 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|189029774|sp|A5ITQ1|SYY_STAA9 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|189029775|sp|A6QHR2|SYY_STAAE RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|189029776|sp|A8Z2P6|SYY_STAAT RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|16975033|pdb|1JII|A Chain A, Crystal Structure Of S. Aureus Tyrrs In Complex With Sb-
           219383
 gi|16975034|pdb|1JIJ|A Chain A, Crystal Structure Of S. Aureus Tyrrs In Complex With Sb-
           239629
 gi|16975035|pdb|1JIK|A Chain A, Crystal Structure Of S. Aureus Tyrrs In Complex With Sb-
           243545
 gi|16975036|pdb|1JIL|A Chain A, Crystal Structure Of S. Aureus Tyrrs In Complex With
           Sb284485
 gi|13701524|dbj|BAB42818.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus N315]
 gi|14247501|dbj|BAB57891.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu50]
 gi|21204840|dbj|BAB95536.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MW2]
 gi|49242098|emb|CAG40797.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|49244996|emb|CAG43457.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|82656847|emb|CAI81276.1| tyrosyl-tRNA synthetase [Staphylococcus aureus RF122]
 gi|87128009|gb|ABD22523.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|87203097|gb|ABD30907.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus NCTC
           8325]
 gi|147741276|gb|ABQ49574.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH9]
 gi|149946727|gb|ABR52663.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH1]
 gi|150374634|dbj|BAF67894.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           Newman]
 gi|156722181|dbj|BAF78598.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu3]
 gi|160368753|gb|ABX29724.1| tyrosine--tRNA ligase [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|257271536|gb|EEV03682.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257275349|gb|EEV06836.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257278090|gb|EEV08738.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257281917|gb|EEV12054.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus E1410]
 gi|257284092|gb|EEV14215.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M876]
 gi|257788084|gb|EEV26424.1| tyrosyl-tRNA synthetase [Staphylococcus aureus A9781]
 gi|257839409|gb|EEV63882.1| tyrosyl-tRNA synthetase [Staphylococcus aureus A9763]
 gi|257843249|gb|EEV67659.1| tyrosyl-tRNA synthetase [Staphylococcus aureus A9719]
 gi|257848339|gb|EEV72330.1| tyrosyl-tRNA synthetase [Staphylococcus aureus A9299]
 gi|257851159|gb|EEV75102.1| tyrosyl-tRNA synthetase [Staphylococcus aureus A8115]
 gi|257855206|gb|EEV78145.1| tyrosyl-tRNA synthetase [Staphylococcus aureus A6300]
 gi|257858548|gb|EEV81424.1| tyrosyl-tRNA synthetase [Staphylococcus aureus A6224]
 gi|257863616|gb|EEV86373.1| tyrosyl-tRNA synthetase [Staphylococcus aureus A5937]
 gi|259160302|gb|EEW45329.1| tyrosyl-tRNA synthetase [Staphylococcus aureus 930918-3]
 gi|259162858|gb|EEW47422.1| tyrosyl-tRNA synthetase [Staphylococcus aureus D30]
 gi|262075657|gb|ACY11630.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ED98]
 gi|269941207|emb|CBI49595.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus TW20]
 gi|282313235|gb|EFB43631.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C101]
 gi|282317301|gb|EFB47675.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C427]
 gi|282319476|gb|EFB49828.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus D139]
 gi|282321704|gb|EFB52029.1| tyrosine--tRNA ligase [Staphylococcus aureus subsp. aureus M899]
 gi|282325049|gb|EFB55359.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282327303|gb|EFB57598.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282331415|gb|EFB60929.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282592920|gb|EFB97923.1| tyrosyl-tRNA synthetase [Staphylococcus aureus A9765]
 gi|282595916|gb|EFC00880.1| tyrosine--tRNA ligase [Staphylococcus aureus subsp. aureus C160]
 gi|282764541|gb|EFC04667.1| tyrosyl-tRNA synthetase [Staphylococcus aureus A8117]
 gi|283460954|gb|EFC08044.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus H19]
 gi|283470994|emb|CAQ50205.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ST398]
 gi|283790627|gb|EFC29444.1| tyrosine--tRNA ligase [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|285817411|gb|ADC37898.1| Tyrosyl-tRNA synthetase [Staphylococcus aureus 04-02981]
 gi|290920003|gb|EFD97071.1| tyrosine--tRNA ligase [Staphylococcus aureus subsp. aureus M1015]
 gi|291095267|gb|EFE25532.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           58-424]
 gi|291466508|gb|EFF09029.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M809]
 gi|294823229|gb|EFG39659.1| tyrosyl-tRNA synthetase [Staphylococcus aureus A9754]
 gi|294969036|gb|EFG45057.1| tyrosyl-tRNA synthetase [Staphylococcus aureus A8819]
 gi|295127698|gb|EFG57335.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|296887576|gb|EFH26474.1| tyrosine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|297178115|gb|EFH37363.1| tyrosyl-tRNA synthetase [Staphylococcus aureus A8796]
 gi|297575625|gb|EFH94341.1| tyrosine--tRNA ligase [Staphylococcus aureus subsp. aureus MN8]
 gi|300887061|gb|EFK82262.1| tyrosine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH70]
 gi|302333393|gb|ADL23586.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           JKD6159]
 gi|302751555|gb|ADL65732.1| tyrosyl-tRNA synthetase, TyrS [Staphylococcus aureus subsp. aureus
           str. JKD6008]
 gi|304340786|gb|EFM06715.1| tyrosine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|312437815|gb|ADQ76886.1| tyrosine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH60]
 gi|312830107|emb|CBX34949.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ECT-R
           2]
 gi|315130634|gb|EFT86620.1| tyrosine--tRNA ligase [Staphylococcus aureus subsp. aureus CGS03]
 gi|315195633|gb|EFU26020.1| tyrosine--tRNA ligase [Staphylococcus aureus subsp. aureus CGS00]
 gi|315197197|gb|EFU27536.1| tyrosine--tRNA ligase [Staphylococcus aureus subsp. aureus CGS01]
 gi|320141672|gb|EFW33507.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MRSA131]
 gi|320143826|gb|EFW35599.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MRSA177]
 gi|323440726|gb|EGA98435.1| tyrosyl-tRNA synthetase [Staphylococcus aureus O11]
 gi|323442966|gb|EGB00588.1| tyrosyl-tRNA synthetase [Staphylococcus aureus O46]
 gi|329314402|gb|AEB88815.1| Tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus T0131]
 gi|329726966|gb|EGG63423.1| tyrosine--tRNA ligase [Staphylococcus aureus subsp. aureus 21189]
 gi|329727191|gb|EGG63647.1| tyrosine--tRNA ligase [Staphylococcus aureus subsp. aureus 21172]
 gi|329733062|gb|EGG69399.1| tyrosine--tRNA ligase [Staphylococcus aureus subsp. aureus 21193]
          Length = 420

 Score =  496 bits (1278), Expect = e-138,   Method: Composition-based stats.
 Identities = 148/421 (35%), Positives = 227/421 (53%), Gaps = 20/421 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            +  L  RG I+Q ++ + ++ L ++  VT Y G D TA SLH GHL   + L   Q+ G
Sbjct: 5   LIEDLKWRGLIYQQTDEQGIEDLLNKEQVTLYCGADPTADSLHIGHLLPFLTLRRFQEHG 64

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+PI L+GGGT +IGDPS + E R +   +++ +NIE I     +  ++GT    A+++N
Sbjct: 65  HRPIVLIGGGTGMIGDPSGKSEERVLQTEEQVDKNIEGISKQMHNIFEFGTDHG-AVLVN 123

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  I  I  LR+ G    VN ML  +S++SRL  E  +S+ EF Y ILQA DF  L
Sbjct: 124 NRDWLGQISLISFLRDYGKHVGVNYMLGKDSIQSRL--EHGISYTEFTYTILQAIDFGHL 181

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLG-ERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
            +  +C++Q+GGSDQWGNI  GI+L          + LT PL+T + G K GK+ SGA+W
Sbjct: 182 NRELNCKIQVGGSDQWGNITSGIELMRRMYGQTDAYGLTIPLVTKSDGKKFGKSESGAVW 241

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA--KLQGKEINEAKKIIAT 304
           L+ E TSPY F+Q+W N  D DV+ F K  T L   EIDR+   K +   + EA+K +A 
Sbjct: 242 LDAEKTSPYEFYQFWINQSDEDVIKFLKYFTFLGKEEIDRLEQSKNEAPHLREAQKTLAE 301

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLT 354
           E+T  +HG +    A   +   F   + S          + +P +++S D       ++ 
Sbjct: 302 EVTKFIHGEDALNDAIRISQALFSGDLKSLSAKELKDGFKDVPQVTLSNDT----TNIVE 357

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           ++++ G + S  +AR  + + AI IN     +    +  +D        +  GKK + + 
Sbjct: 358 VLIETGISPSKRQAREDVNNGAIYINGERQQDVNYALAPEDKIDGEFTIIRRGKKKYFMV 417

Query: 415 H 415
           +
Sbjct: 418 N 418


>gi|20809023|ref|NP_624194.1| tyrosyl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4]
 gi|81480271|sp|Q8R6V5|SYY_THETN RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|20517693|gb|AAM25798.1| Tyrosyl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4]
          Length = 406

 Score =  496 bits (1278), Expect = e-138,   Method: Composition-based stats.
 Identities = 182/409 (44%), Positives = 264/409 (64%), Gaps = 7/409 (1%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L +L ERG+I Q+++  E++ L  +  +T YIG+D TA SLH GHL Q+M +  +Q+ G
Sbjct: 3   VLEVLKERGYIAQMTHEEEIEKLLEKEKITFYIGFDPTADSLHVGHLIQIMTMAHMQRAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+PI L+GGGT++IGDPS R + R+M+  +EI  N E  K     FI +  GK  A+M N
Sbjct: 63  HRPIVLLGGGTALIGDPSGRTDMRKMLTKEEIDRNAEAFKKQMERFIDFSEGK--AIMEN 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  + YI+ LR+IG  F+VNRML  E+ ++R++R   L+FLEFNYM++QAYDF+EL
Sbjct: 121 NAKWLLGLNYIEFLRDIGVHFTVNRMLEAEAFKTRMER--GLTFLEFNYMLMQAYDFLEL 178

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            + Y C +QMGG+DQW NII G++L  + +  + + +T  LLTT+ G KMGKT  GAIWL
Sbjct: 179 YRRYGCVMQMGGNDQWSNIIAGVELIRKKEGKQAYGMTFVLLTTSEGKKMGKTEKGAIWL 238

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           + + TSPY F+QYWRNI DADV      LT LPM E+ R+ +L+ KEINEAKK++A E+T
Sbjct: 239 DPKKTSPYEFYQYWRNIGDADVEKALALLTFLPMDEVRRLGRLRDKEINEAKKVLAFEVT 298

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
            +VHG EEA KA  AA   F+     +H+P+I +S+D +  G  ++ ++ +A    S +E
Sbjct: 299 KLVHGEEEALKAQKAAEALFEGGGEMEHVPSIEVSQDII--GRKIVDVLFEAKVIPSKSE 356

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            RR ++   + IN+  + N    IK ++      I +  GKK +    +
Sbjct: 357 GRRLIQQGGLYINDKRVENVDECIK-EEMVKENAILVRKGKKEYHRLLV 404


>gi|57652027|ref|YP_186612.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus COL]
 gi|81694288|sp|Q5HF45|SYY_STAAC RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|57286213|gb|AAW38307.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus COL]
          Length = 420

 Score =  496 bits (1278), Expect = e-138,   Method: Composition-based stats.
 Identities = 148/421 (35%), Positives = 227/421 (53%), Gaps = 20/421 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            +  L  RG I+Q ++ + ++ L ++  VT Y G D TA SLH GHL   + L   Q+ G
Sbjct: 5   LIEDLKWRGLIYQQTDEQGIEDLLNKEQVTLYCGADPTADSLHIGHLLPFLTLRRFQEHG 64

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+PI L+GGGT +IGDPS + E R +   +++ +NIE I     +  ++GT    A+++N
Sbjct: 65  HRPIVLIGGGTGMIGDPSGKSEERVLQTEEQVDKNIEGISKQIHNIFEFGTDHG-AVLVN 123

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  I  I  LR+ G    VN ML  +S++SRL  E  +S+ EF Y ILQA DF  L
Sbjct: 124 NRDWLGQISLISFLRDYGKHVGVNYMLGKDSIQSRL--EHGISYTEFTYTILQAIDFGHL 181

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLG-ERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
            +  +C++Q+GGSDQWGNI  GI+L          + LT PL+T + G K GK+ SGA+W
Sbjct: 182 NRELNCKIQVGGSDQWGNITSGIELMRRMYGQTDAYGLTIPLVTKSDGKKFGKSESGAVW 241

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA--KLQGKEINEAKKIIAT 304
           L+ E TSPY F+Q+W N  D DV+ F K  T L   EIDR+   K +   + EA+K +A 
Sbjct: 242 LDAEKTSPYEFYQFWINQSDEDVIKFLKYFTFLGKEEIDRLEQSKNEAPHLREAQKTLAE 301

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLT 354
           E+T  +HG +    A   +   F   + S          + +P +++S D       ++ 
Sbjct: 302 EVTKFIHGEDALNDAIRISQALFSGDLKSLSAKELKDGFKDVPQVTLSNDT----TNIVE 357

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           ++++ G + S  +AR  + + AI IN     +    +  +D        +  GKK + + 
Sbjct: 358 VLIETGISPSKRQAREDVNNGAIYINGERQQDVNYALAPEDKIDGEFTIIRRGKKKYFMV 417

Query: 415 H 415
           +
Sbjct: 418 N 418


>gi|239637948|ref|ZP_04678909.1| tyrosyl-tRNA synthetase [Staphylococcus warneri L37603]
 gi|239596511|gb|EEQ79047.1| tyrosyl-tRNA synthetase [Staphylococcus warneri L37603]
          Length = 420

 Score =  496 bits (1277), Expect = e-138,   Method: Composition-based stats.
 Identities = 144/421 (34%), Positives = 225/421 (53%), Gaps = 20/421 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            +  L  RG I+Q ++   ++ L ++  VT Y G D TA SLH GHL   + L   Q+ G
Sbjct: 5   LIEDLKWRGLIYQQTDEAGIEELLNKEQVTLYCGADPTADSLHIGHLLPFLTLRRFQEHG 64

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+PI L+GGGT +IGDPS + E R +   ++++ N++ I        ++GT K  A+++N
Sbjct: 65  HRPIVLIGGGTGMIGDPSGKSEERVLQTEEQVEANVQGISNQMHKLFEFGTDKG-AVLVN 123

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N+ WL  I  I  LR+ G    VN ML  +S+++RL  E  +S+ EF Y ILQA DF  L
Sbjct: 124 NKDWLGQISLISFLRDYGKHVGVNYMLGKDSIQTRL--EHGISYTEFTYTILQAIDFGHL 181

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLG-ERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
            +  +C++Q+GGSDQWGNI  GI+L        + + LT PL+T + G K GK+ SGA+W
Sbjct: 182 NRELNCKIQVGGSDQWGNITSGIELMRRMYGQTEAYGLTIPLVTKSDGKKFGKSESGAVW 241

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIAT 304
           L+ + TSPY F+Q+W N  D DV+ F K  T L   EID    +K +     EA+K +A 
Sbjct: 242 LDADKTSPYEFYQFWINQSDEDVIKFLKYFTFLSKEEIDQLEQSKEEAPHKREAQKALAE 301

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLT 354
            +T  +HG +    A   +   F   + S          + +P + +SKD       ++ 
Sbjct: 302 NVTRFIHGEDALNDAIRISQALFSGDLKSLSAKELKEGFKDVPQVELSKDT----TNIID 357

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +++ G  +S  +AR  + + AI IN     +   ++  +D        +  GKK + + 
Sbjct: 358 ALIETGIGSSKRQAREDVNNGAIYINGERQQDVNYELTDEDKIEGAFTIIRRGKKKYFMV 417

Query: 415 H 415
           +
Sbjct: 418 N 418


>gi|282861890|ref|ZP_06270953.1| tyrosyl-tRNA synthetase [Streptomyces sp. ACTE]
 gi|282562915|gb|EFB68454.1| tyrosyl-tRNA synthetase [Streptomyces sp. ACTE]
          Length = 422

 Score =  496 bits (1277), Expect = e-138,   Method: Composition-based stats.
 Identities = 142/421 (33%), Positives = 234/421 (55%), Gaps = 11/421 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +D +  L  RG   Q ++   L    + G VT Y G+D TA+SLH GHL Q++ +  LQ 
Sbjct: 2   TDIVDELKWRGLFAQSTDEDALRKALADGPVTFYCGFDPTAASLHVGHLVQVLTMRRLQL 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            G +P++L+GG T  IGDP      R +   + I   +++++G    F+ +  G   A M
Sbjct: 62  AGLRPLALVGGATGQIGDPRP-TAERTLNDPETIAAWVDRLRGQIEPFLTF-EGPNAATM 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  W   +  I+ LR+IG  F VN+ML+ +SV  RL+ ++ +S+ EF+Y +LQ  DF+
Sbjct: 120 VNNLDWTAGLSAIEFLRDIGKHFRVNKMLTKDSVARRLESQEGISYTEFSYQLLQGMDFL 179

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASGTKMGKTLSGA 244
           EL + + C LQ GGSDQWGN+  GIDL  RL+   ++ AL +PL+  A GTK GK+ SGA
Sbjct: 180 ELYRRHGCTLQQGGSDQWGNLTAGIDLIHRLEPGAQVHALATPLMVKADGTKFGKSESGA 239

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKII 302
           +WL+ EMT+PY F+Q+W N+DD D+ ++ + L+     E+  + +L  +  +   A++ +
Sbjct: 240 VWLDPEMTTPYAFYQFWLNVDDRDISTYMRILSFKSREELQELEQLTQERPQARSAQRAL 299

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQ-HMPTI-----SISKDEVSRGMGLLTLI 356
           A E+TT+VHG  +      A+   F     ++   PT+      +    V+    ++ L+
Sbjct: 300 AEELTTLVHGGAQCAAVIAASKALFGQGDLAELDEPTLGAALSEVPHARVTELGPVVDLL 359

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V+ G + S + ARR +K     +NN+ +++ +     ++      + L  GKKN     +
Sbjct: 360 VEVGLSASKSAARRTVKEGGAYVNNAKVTDGEAAPAREELLHGRWLVLRRGKKNLAAVEV 419

Query: 417 C 417
            
Sbjct: 420 T 420


>gi|149006933|ref|ZP_01830614.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae SP18-BS74]
 gi|149011956|ref|ZP_01833104.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae SP19-BS75]
 gi|147761534|gb|EDK68499.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae SP18-BS74]
 gi|147763911|gb|EDK70844.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae SP19-BS75]
 gi|332071173|gb|EGI81668.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae GA17545]
          Length = 418

 Score =  496 bits (1277), Expect = e-138,   Method: Composition-based stats.
 Identities = 151/419 (36%), Positives = 228/419 (54%), Gaps = 17/419 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L +RG I Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  G
Sbjct: 3   IFDELKDRGLIFQTTDEEALRKALEEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKP +L+GG T +IGDPSF+D  R +     +   ++ I+G  S F+ +  G+  A+M+N
Sbjct: 63  HKPYALVGGATGLIGDPSFKDAERSLQTKDTVDGWVKSIQGQLSRFLDFENGENKAVMVN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W  SI +ID LR+IG +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF  L
Sbjct: 123 NYDWFGSISFIDFLRDIGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFFVL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            ++++  LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WL
Sbjct: 181 NQDHNVTLQIGGSDQWGNMTAGTELLRRKADKTGHVITVPLITDATGKKFGKSEGNAVWL 240

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATE 305
           N E TSPY  +Q+W N+ DAD V F K  T L + EI+ + K      +E  A+K++A E
Sbjct: 241 NPEKTSPYEMYQFWMNVMDADAVRFLKIFTFLSLDEIEDIRKQFEAAPHERLAQKVLARE 300

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTL 355
           + T+VHG E  ++A     + F  +I +          + +P   +  DE +    ++ L
Sbjct: 301 VVTLVHGEEAYKEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVQADENN---NIVEL 357

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +V +G   S  +AR  +++ AI +N   I      +   D        +  GKK + + 
Sbjct: 358 LVSSGIVNSKRQAREDVQNGAIYVNGDRIQELDYVLSDADKLENELTVIRRGKKKYFVL 416


>gi|302528030|ref|ZP_07280372.1| tyrosyl-tRNA synthetase [Streptomyces sp. AA4]
 gi|302436925|gb|EFL08741.1| tyrosyl-tRNA synthetase [Streptomyces sp. AA4]
          Length = 424

 Score =  496 bits (1277), Expect = e-138,   Method: Composition-based stats.
 Identities = 147/422 (34%), Positives = 232/422 (54%), Gaps = 13/422 (3%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  LS RG I Q ++   L     +G +T Y G+D TA SLHAG+L  L++L   Q+ G
Sbjct: 5   ILDELSWRGLIAQSTDIDALRRELDRGPLTLYCGFDPTAPSLHAGNLVPLLMLKRFQRAG 64

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+PI L GG T +IGDP    E R +     + +   +I+G    F+ +    T A++ N
Sbjct: 65  HRPIVLAGGATGMIGDPRDNGE-RTLNTLDVVADWAGRIRGQLERFVDFDDSPTGAIVEN 123

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W      ++ LR++G  FSVN ML+ E+V+ RL+    +S+ EF+Y++LQ+ D++EL
Sbjct: 124 NLDWTGKQNTLEFLRDVGKHFSVNVMLNRETVKRRLE-GDGMSYTEFSYLLLQSQDYLEL 182

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT-LSGAIW 246
            + + C+LQ+GGSDQWGN++ G+DL  R++     ALT+PL+T A G K GK+   G +W
Sbjct: 183 YRKHGCKLQVGGSDQWGNLVGGVDLIRRVEGGAAHALTAPLVTDAEGRKFGKSTGGGNVW 242

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIAT 304
           L+ E+TSPY ++QY+ N+ DADV+ + +  T L   EID +AK   +   +  A+K +A 
Sbjct: 243 LDPELTSPYAWYQYFVNVGDADVLRYLRLFTFLDQEEIDALAKDTEERPHLRAAQKRLAE 302

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQ-HMPTISISKDEVSRG-------MGLLTLI 356
           E T +VHG ++  +   A+   F     +    PT+  +  EV  G         ++ L+
Sbjct: 303 EFTNLVHGEDQTRQVIAASQALFGRGELTGLDGPTLDAAMAEVPNGKVEPAGDATIVDLL 362

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +  G   S   ARR +K     +NN  I++E+ +    D      + +  GK+N     +
Sbjct: 363 LAGGLVDSKGAARRTVKEGGAYVNNVKIADEEWKPSASDALHGRWLVVRKGKRNVAGVRV 422

Query: 417 CG 418
            G
Sbjct: 423 GG 424


>gi|304413673|ref|ZP_07395117.1| tyrosyl-tRNA synthetase [Candidatus Regiella insecticola LSR1]
 gi|304283764|gb|EFL92158.1| tyrosyl-tRNA synthetase [Candidatus Regiella insecticola LSR1]
          Length = 432

 Score =  496 bits (1277), Expect = e-138,   Method: Composition-based stats.
 Identities = 164/425 (38%), Positives = 229/425 (53%), Gaps = 21/425 (4%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           K D +  L ERG I QI++   L    +QG ++ Y G+D TA SLH GHL  L+ L   Q
Sbjct: 3   KIDLIKELEERGLIAQITDKEALTQRLAQGSLSLYCGFDPTADSLHLGHLVPLLCLKRFQ 62

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GH PI+L+GG T +IGDPSF+ E R++   + + + + KI+   S F+ +   K  A+
Sbjct: 63  LAGHTPIALVGGATGLIGDPSFKAEERKLNTLETVDQWVAKIRQQVSPFLDFKNDKNRAI 122

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYD 183
            +NN  W   +  +  LR+IG  FS+N+M+S E+V+ RL R E  LSF EF+Y +LQ YD
Sbjct: 123 TVNNYDWFAQMNVLTFLRDIGKHFSINQMISKEAVKQRLDRHESGLSFTEFSYNLLQGYD 182

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F  L K ++  LQ+GGSDQWGNI  GIDL  RL   +++ LT PL+T A GTK GKT +G
Sbjct: 183 FASLNKKHNVELQIGGSDQWGNITSGIDLTRRLHQQQVYGLTVPLITKADGTKFGKTEAG 242

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID---RMAKLQGKEINEAKK 300
           A+WL+ + TSPY F+Q+W N  DADV  F K  T + + +I       +L GK    A+ 
Sbjct: 243 AVWLDAKKTSPYKFYQFWINTSDADVYRFLKLFTFMALEDIKALQEEDQLSGKPPR-AQA 301

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHS-----------QHMPTISISKDEVSRG 349
           ++A E+T MVHG      A       F                   MPTI +  D     
Sbjct: 302 VLAEEMTKMVHGETALAAAQRITQSLFSSHFSDMTQADFSQLAQDGMPTIDLFSD----- 356

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
             L   +V AG A S  +AR+ +  NA+K+N     N +      D        L  GKK
Sbjct: 357 TDLQQALVNAGLAPSRGQARKLISENAVKVNGEKQGNAQYSFTDADRLFGKYTLLCRGKK 416

Query: 410 NHIIC 414
           ++ + 
Sbjct: 417 HYSLV 421


>gi|302339639|ref|YP_003804845.1| tyrosyl-tRNA synthetase [Spirochaeta smaragdinae DSM 11293]
 gi|301636824|gb|ADK82251.1| tyrosyl-tRNA synthetase [Spirochaeta smaragdinae DSM 11293]
          Length = 411

 Score =  496 bits (1277), Expect = e-138,   Method: Composition-based stats.
 Identities = 169/411 (41%), Positives = 253/411 (61%), Gaps = 6/411 (1%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +D L++L ERGFI Q ++ + L+   S G  + Y+G D T  SLH GH+  L  +  LQ+
Sbjct: 2   ADALTVLRERGFIQQCTDEKGLETALSSGPNSFYVGVDPTGISLHVGHMVPLFAMAHLQR 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++++GGGT++IGDPS + E R++   + IQ+N E IK      + +  GK  A +
Sbjct: 62  AGHKPLAVVGGGTALIGDPSGKTEMRKIQSVETIQKNAEAIKKQIGRIVDFSDGK--AKL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           LNN  WL ++ YI+ LR+IG  FSVNRML+FES + RL  E  LSF+EFNY +LQ+YDF 
Sbjct: 120 LNNYDWLANLNYIEFLRDIGRHFSVNRMLTFESYKKRL--ETGLSFIEFNYQLLQSYDFY 177

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L ++ +C  Q+GG DQWGNI+ G++L  R+   ++F LT PL+T + G KMGKT  GA+
Sbjct: 178 VLNRDENCLFQIGGDDQWGNIVAGVELIRRMSGNEVFGLTFPLVTRSDGKKMGKTEKGAV 237

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
           +L+  +  P+ ++QYWRNI DADV  F    T LP+ E+  + +L+G E+N AK+I+A E
Sbjct: 238 FLDPNLFPPFEYYQYWRNIADADVEKFLMLFTFLPVEEVRELGRLEGSELNRAKEILAYE 297

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQ--HMPTISISKDEVSRGMGLLTLIVKAGFAT 363
            T ++HG++EA+KA  AA   F     S    +P I +  +++  G+G+L L       +
Sbjct: 298 QTKLIHGKDEADKARDAAKAAFSAGGASDRGAIPFIELPNEDLEEGIGILELFAMTTLCS 357

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           S +EARR ++     IN+  I + +  +  +  D  G + L  GKK     
Sbjct: 358 SRSEARRLVQQGGAVINDEKIDDIEAIVTNKQLDDDGELLLRAGKKRFFRV 408


>gi|302023205|ref|ZP_07248416.1| tyrosyl-tRNA synthetase [Streptococcus suis 05HAS68]
          Length = 428

 Score =  496 bits (1277), Expect = e-138,   Method: Composition-based stats.
 Identities = 147/420 (35%), Positives = 225/420 (53%), Gaps = 12/420 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L  RG + Q ++   L    ++G V+ Y GYD TA SLH GHL  ++    LQ  
Sbjct: 2   NIFEELKARGLVFQTTDEEALVKALTEGQVSYYTGYDPTADSLHLGHLVVILTSRRLQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP +L+GG T +IGDPSF+D  R +     +   + KI+G  S F+ +  G   A M+
Sbjct: 62  GHKPYALVGGATGLIGDPSFKDAERSLQTKDTVDGWVTKIQGQLSRFLDFENGDNKAEMV 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I +ID LR++G +++VN M+S +SV+ R+  E  +S+ EF Y I+Q YDF E
Sbjct: 122 NNYDWFSDISFIDFLRDVGKYYTVNYMMSKDSVKKRI--ETGISYTEFAYQIMQGYDFYE 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L   Y+  LQ+GGSDQWGN+  G +L  R        +T PL+T ++G K GK+   A+W
Sbjct: 180 LNDKYNVTLQIGGSDQWGNMTAGTELLRRKADKSGHVMTVPLITDSTGKKFGKSEGNAVW 239

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIAT 304
           L+ + TSPY  +Q+W N+ D D V F K  T L + EI  + K      +E  A+KI+A 
Sbjct: 240 LDADKTSPYEMYQFWLNVMDDDAVRFLKIFTFLSLDEIAEIEKQFDAARHERLAQKILAR 299

Query: 305 EITTMVHGREEAEKAATAAMECFDMSI-------HSQHMPTISISKDEVSRGMGLLTLIV 357
           E+ T+VHG E   +A     + F  +I         Q +  +     +    + ++ L+V
Sbjct: 300 EVVTLVHGEEAYNQALNITEQLFAGNIKNLSAKELKQGLSNVPNYAVQAEDNLNIVELLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNI-KLSFGKKNHIICHL 416
            +G  TS  +AR  +++ AI +N   + +    +   D D  G +  +  GKK + +  L
Sbjct: 360 TSGIVTSKRQAREDVQNGAIYVNGERVQDLDYTLSDSDRDLDGELTVIRRGKKKYSVLTL 419


>gi|326204657|ref|ZP_08194513.1| tyrosyl-tRNA synthetase [Clostridium papyrosolvens DSM 2782]
 gi|325985224|gb|EGD46064.1| tyrosyl-tRNA synthetase [Clostridium papyrosolvens DSM 2782]
          Length = 408

 Score =  496 bits (1277), Expect = e-138,   Method: Composition-based stats.
 Identities = 171/412 (41%), Positives = 258/412 (62%), Gaps = 5/412 (1%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S    +L ERGFI QI++  E+  L S+  VT YIG+D TA SLH GH  QLM++  +Q+
Sbjct: 2   SSVFDVLKERGFIAQITHEEEVKKLLSEEKVTFYIGFDPTADSLHIGHFLQLMVMAHMQQ 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH PI L+GGGT+++GDP+ +++ R+MM  + ++ N +  K   S FI +   K  A+M
Sbjct: 62  AGHVPIVLIGGGTAMVGDPTGKNDMRKMMTREIVKHNADSFKTQISKFIDFSDNK--AIM 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           ++N  WL  + Y+  LRE+G  FSVNRML+ E  +SR+  E+ L+FLEFNYM++Q+YDF+
Sbjct: 120 VDNGDWLMDLNYVQFLREVGVHFSVNRMLTAECFKSRM--EKGLTFLEFNYMLMQSYDFL 177

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L   Y C++++GG DQW NI+ GI+L  + +   ++ +T  LLTT+ G KMGKT +GA+
Sbjct: 178 VLNDKYGCKMELGGDDQWSNILGGINLVRKSEGRDVYGMTFKLLTTSEGKKMGKTENGAV 237

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
           WL+ E T+PY F+QYWRNI D DV +    +T LPM E+ R+  L+   INEAK ++A E
Sbjct: 238 WLDPEKTTPYEFYQYWRNIADNDVENCLALMTFLPMDEVRRLGALKDAGINEAKAVLAYE 297

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           +T +VHG EEA+KA  AA   F     S  +P + +   ++  G+ ++ L++ AG   S 
Sbjct: 298 VTKIVHGEEEAKKAKEAAEAIFGGKGKSDSIPFVEVKSADIEAGIKIIDLLMIAGLTPSK 357

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           +EARR ++   + +N+  I+     +   D    G + L  GKK+ +   L 
Sbjct: 358 SEARRAVQQGGVLLNDEKITAFDYTVGTTDLV-NGEMMLQKGKKSFVKVKLV 408


>gi|332557924|ref|ZP_08412246.1| tyrosyl-tRNA synthetase [Rhodobacter sphaeroides WS8N]
 gi|332275636|gb|EGJ20951.1| tyrosyl-tRNA synthetase [Rhodobacter sphaeroides WS8N]
          Length = 416

 Score =  496 bits (1277), Expect = e-138,   Method: Composition-based stats.
 Identities = 214/413 (51%), Positives = 278/413 (67%), Gaps = 2/413 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KSDFL ++ ERG++   ++ + LD   S+GVV AYIGYD TA+SLH GHL  +M+L WLQ
Sbjct: 6   KSDFLRVMQERGYLADCTDMQALDEALSKGVVPAYIGYDATAASLHVGHLLNIMMLRWLQ 65

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           KTGHKPI+LMGGGT+ +GDPSFR E R ++    I ENIE ++ +F+ ++ YG G TDAL
Sbjct: 66  KTGHKPITLMGGGTTKVGDPSFRSEERPLLTPDRIDENIEGMRKVFARYLSYGEGATDAL 125

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           MLNN  WL  + Y+D LR+IG  FSVNRMLSFESV+SRL REQSLSFLEFNYMILQAYDF
Sbjct: 126 MLNNAEWLDQLNYLDFLRDIGRHFSVNRMLSFESVKSRLDREQSLSFLEFNYMILQAYDF 185

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL +   CRLQMGGSDQWGNI+ GIDL  R+   ++F LTSPLLTT+ G KMGK+  GA
Sbjct: 186 LELFRRTGCRLQMGGSDQWGNIVNGIDLTRRVLEGEIFGLTSPLLTTSDGRKMGKSAGGA 245

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WLN EM +PY+FWQ+WRN  DADV  F K  T LP+ E DR+  LQG EIN AK ++A 
Sbjct: 246 VWLNGEMLAPYDFWQFWRNTTDADVGRFLKLYTELPVEECDRLGALQGSEINAAKILLAN 305

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E+TT++HGRE AE A   A   F+       +  + +    +  G+ +   +V AG   S
Sbjct: 306 EVTTLLHGREAAEAAEATARAVFEEGGVGGALEVVELPAATLGDGLSVAHFLVAAGLVAS 365

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
             EA+R +  N ++ NN  + +    +          +K+S G+K H +  L 
Sbjct: 366 GKEAKRLVAENGLRFNNEPVGDANAPVTAA--TVGEELKVSIGRKKHKLVRLS 416


>gi|291543945|emb|CBL17054.1| tyrosyl-tRNA synthetase [Ruminococcus sp. 18P13]
          Length = 405

 Score =  496 bits (1277), Expect = e-138,   Method: Composition-based stats.
 Identities = 175/413 (42%), Positives = 261/413 (63%), Gaps = 12/413 (2%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG + Q+++ +E+  L + G  T YIG+D TA SLH GH   L L+  LQ  G
Sbjct: 3   LFEELKRRGLLAQLTDEKEIKELINAGKATFYIGFDPTADSLHVGHFMALCLMKRLQMAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           +KPI L+GGGT +IGDPS + + R+MM  + I+ N+E  K   S FI +  GK  AL +N
Sbjct: 63  NKPIVLLGGGTGMIGDPSGKTDMRKMMTRETIEHNVECFKKQMSRFIDFSEGK--ALAVN 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  + Y+D+LR++G+ FSVN+ML+FE  + R++R   L+FLEFNYMI+Q+YDF  L
Sbjct: 121 NADWLLDLNYVDVLRDVGACFSVNKMLTFECYKQRMER--GLTFLEFNYMIMQSYDFYRL 178

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            ++Y C +Q GG DQW N++ G +L  +      +A+T  LL  + G KMGKT  GA+WL
Sbjct: 179 FQDYGCNMQFGGDDQWANMLGGTELIRKKLGKDAYAMTITLLLNSEGKKMGKTEKGAVWL 238

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK-LQGKEINEAKKIIATEI 306
           +   TSPY F+QYWRN++DADV+   K LT +P+ EI+ M + ++G + N+AK+++A E+
Sbjct: 239 DPAKTSPYEFYQYWRNVNDADVIKCLKMLTFVPVEEIEDMEQHMEGAQFNKAKELLAYEL 298

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSR-GMGLLTLIVKAGFATST 365
           T +VHG EEA KA TAA   F    +S  MPT ++S +++   G+G+LTL+VK G A S 
Sbjct: 299 TKLVHGEEEANKADTAAKAVFSGG-NSADMPTTTLSGEDIPEGGIGILTLLVKCGLAASN 357

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLCG 418
            E RR ++   I +N++ I++ +  ++ +     G + +  GKK      + G
Sbjct: 358 GEGRRLVQQGGISVNDAKITDPQTMLQPE-----GELIIRKGKKVFHKVVMEG 405


>gi|332522596|ref|ZP_08398848.1| tyrosine--tRNA ligase [Streptococcus porcinus str. Jelinkova 176]
 gi|332313860|gb|EGJ26845.1| tyrosine--tRNA ligase [Streptococcus porcinus str. Jelinkova 176]
          Length = 420

 Score =  496 bits (1277), Expect = e-138,   Method: Composition-based stats.
 Identities = 146/423 (34%), Positives = 227/423 (53%), Gaps = 17/423 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L  RG + Q ++   L    ++G V+ Y GYD TA SLH GHL  ++    LQ  
Sbjct: 2   NIFEELKARGLVFQTTDEEALVKALTEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP +L+GG T +IGDPSF+D  R +   + + E   KIKG  S F+ +  G+  A ++
Sbjct: 62  GHKPYALVGGATGLIGDPSFKDSERSLQTKETVLEWSAKIKGQLSQFLDFENGENKAELV 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I +ID LR++G +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF E
Sbjct: 122 NNYDWFSQISFIDFLRDVGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFYE 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L   ++  LQ+GGSDQWGN+  G +L  R        +T PL+T ASG K GK+   A+W
Sbjct: 180 LNDKHNVTLQIGGSDQWGNMTAGTELLRRKSDKIGHVMTVPLITDASGKKFGKSEGNAVW 239

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIAT 304
           L+ + TSPY  +Q+W N+ D D V F K  T L + EI  + +      +E  A+K +A 
Sbjct: 240 LDADKTSPYEMYQFWLNVMDDDAVRFLKIFTFLSLQEIAEIEEAFNAARHERLAQKTLAR 299

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLT 354
           E+ T+VHG E  ++A     + F  +I             ++P  ++  D+    + ++ 
Sbjct: 300 EVVTLVHGEEAYKQAVNITEQLFAGNIKQLSAKELRQGLSNVPNYAVQTDD---NLNIVD 356

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           ++V +  ++S  +AR  +++ AI IN   +S+    +   D        +  GKK + + 
Sbjct: 357 ILVSSKISSSKRQAREDVQNGAIYINGERVSDLNYVLSDTDKIEGQLTVIRRGKKKYFVL 416

Query: 415 HLC 417
              
Sbjct: 417 TFT 419


>gi|324994406|gb|EGC26320.1| tyrosine--tRNA ligase [Streptococcus sanguinis SK678]
          Length = 419

 Score =  495 bits (1276), Expect = e-138,   Method: Composition-based stats.
 Identities = 145/416 (34%), Positives = 226/416 (54%), Gaps = 11/416 (2%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L ERG + Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  G
Sbjct: 4   IFDELKERGLVFQTTDEAALRKALEEGQVSYYSGYDPTADSLHLGHLVAILTSRRLQLAG 63

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKP +L+GG T +IGDPSF+D  R +   + ++   + I+   S F+ +  G   A M+N
Sbjct: 64  HKPYALVGGATGLIGDPSFKDAERSLQTKETVEGWAKSIQDQLSRFLDFEKGDNKAEMVN 123

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W  SI +ID LR++G +F+VN M+S +SV+SR+  E  +S+ EF Y I+Q YDF  L
Sbjct: 124 NYDWFSSISFIDFLRDVGKYFTVNYMMSKDSVKSRI--ETGISYTEFAYQIMQGYDFYVL 181

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            +N+   LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WL
Sbjct: 182 NQNHGVTLQIGGSDQWGNMTAGTELLRRKADKIGHVMTVPLITDATGKKFGKSEGNAVWL 241

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATE 305
           N + TSPY  +Q+W N+ DAD + F K  T L + EI+ + +      +E  A+K++A E
Sbjct: 242 NPDKTSPYEMYQFWMNVMDADAIRFLKIFTFLSLDEIEEIRQQFEAAPHERLAQKVLARE 301

Query: 306 ITTMVHGREEAEKAATAAMECFDMSI-------HSQHMPTISISKDEVSRGMGLLTLIVK 358
           + ++VHG+E  ++A     + F  +I         Q +  +   + +    + ++ L+V 
Sbjct: 302 VVSLVHGQEAYQEALNITEQLFAGNIKNLSIKELKQGLRGVPNYQVQAEDNLNIVELLVI 361

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           AG   S  +AR  +++ AI +N   I +    +   D        +  GKK + + 
Sbjct: 362 AGVVNSKRQAREDVQNGAIYLNGERIQDLDYVLNALDKLEDELTVIRRGKKKYFVL 417


>gi|190568333|ref|ZP_03021241.1| tyrosyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I]
 gi|190560589|gb|EDV14566.1| tyrosyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I]
          Length = 418

 Score =  495 bits (1276), Expect = e-138,   Method: Composition-based stats.
 Identities = 153/418 (36%), Positives = 227/418 (54%), Gaps = 11/418 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
             L  L  RG I+Q ++   L+ L  +  V  Y G+D TA SLH GH+  +++L   Q  
Sbjct: 2   GILQDLEFRGLINQQTDAEGLEQLLEKESVKLYCGFDPTADSLHIGHMLPVLMLRRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI+L+GGGT +IGD S +   R +     +    E IK   S+F+++   +  A M 
Sbjct: 62  GHQPIALVGGGTGMIGDSSGKKAERTLNTKDTVAYYTESIKNQLSNFLEFENVENPATMA 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL ++  I  LR+IG  F +N ML+ ++V SRL  E  +SF EF+YMILQ+YDF+ 
Sbjct: 122 NNYDWLGNLDVISFLRDIGKNFGLNYMLAKDTVASRL--ETGISFTEFSYMILQSYDFLN 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGER-LKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           L ++++CRLQ+GGSDQWGNI  G++L  +  +  K F LT PL+T + GTK GKT  GAI
Sbjct: 180 LYQHHNCRLQIGGSDQWGNITAGLELIRKSEEDAKAFGLTIPLVTKSDGTKFGKTEGGAI 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIA 303
           WL+ E T+PY F+Q+W N DD DVV + K  T L   EI  + K   +  E   A+K + 
Sbjct: 240 WLDPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLSHEEILELEKQVAEAPEKRAAQKALG 299

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRGMGLLTLIV 357
            E+T +VHG E  E+A   +   F  S+       I        S +  +    L+ L+V
Sbjct: 300 AEMTKLVHGEEALEQAIKISAALFSGSVAELTASEIEQGFKDVPSVERTAEDTVLIDLLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           ++  + S  +AR  + + AI +N          +  +D        +  GKK + +  
Sbjct: 360 ESKISPSKRQAREDVTNGAIYVNGERTQALDYVVTEKDRIEGKFTIIRRGKKKYFLIR 417


>gi|282927858|ref|ZP_06335469.1| tyrosyl-tRNA synthetase [Staphylococcus aureus A10102]
 gi|282590368|gb|EFB95447.1| tyrosyl-tRNA synthetase [Staphylococcus aureus A10102]
          Length = 420

 Score =  495 bits (1276), Expect = e-138,   Method: Composition-based stats.
 Identities = 148/421 (35%), Positives = 227/421 (53%), Gaps = 20/421 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            +  L  RG I+Q ++ + ++ L ++  VT Y G D TA SLH GHL   + L   Q+ G
Sbjct: 5   LIEDLKWRGLIYQQTDEQGIEDLLNKEQVTLYCGADPTADSLHIGHLLPFLTLRRFQEHG 64

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+PI L+GGGT +IGDPS + E R +   +++ +NIE I     +  ++GT    A+++N
Sbjct: 65  HRPIVLIGGGTGMIGDPSGKSEERVLQTEEQVDKNIEGISKQMHNIFEFGTDHG-AVLVN 123

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  I  I  LR+ G    VN ML  +S++SRL  E  +S+ EF Y ILQA DF  L
Sbjct: 124 NRDWLGQISLISFLRDYGKHVGVNYMLGKDSIQSRL--EHGISYTEFTYTILQAIDFGHL 181

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLG-ERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
            +  +C++Q+GGSDQWGNI  GI+L          + LT PL+T + G K GK+ SGA+W
Sbjct: 182 NRELNCKIQVGGSDQWGNITSGIELMRRMYGQTDAYGLTIPLVTKSDGKKFGKSESGAVW 241

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA--KLQGKEINEAKKIIAT 304
           L+ E TSPY F+Q+W N  D DV+ F K  T L   EIDR+   K +   + EA+K +A 
Sbjct: 242 LDAEKTSPYEFYQFWINQSDEDVIKFLKYFTFLGKEEIDRLEQSKNEAPHLREAQKTLAE 301

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLT 354
           E+T  +HG +    A   +   F   + S          + +P +++S D       ++ 
Sbjct: 302 EVTKFIHGEDALNDAIRISQALFSGDLKSLSAKELKDGFKDVPQVTLSNDT----TNIVE 357

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           ++++ G + S  +AR  + + AI IN     +    +  +D        +  GKK + + 
Sbjct: 358 VLIETGISPSKRQAREDVNNGAIYINGERQQDVNYALAPEDKIDGEFTIIRRGKKKYFMV 417

Query: 415 H 415
           +
Sbjct: 418 N 418


>gi|226306757|ref|YP_002766717.1| tyrosyl-tRNA synthetase [Rhodococcus erythropolis PR4]
 gi|226185874|dbj|BAH33978.1| tyrosyl-tRNA synthetase [Rhodococcus erythropolis PR4]
          Length = 425

 Score =  495 bits (1276), Expect = e-138,   Method: Composition-based stats.
 Identities = 145/421 (34%), Positives = 225/421 (53%), Gaps = 13/421 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + L  L+ RG I Q ++   L      G VT Y G+D T  SLHAGHL  L+ L   Q+ 
Sbjct: 4   NILDELTWRGLIAQSTDLDALRKDLEAGPVTLYAGFDPTGPSLHAGHLVPLLALKRFQRA 63

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           G++PI L GG T +IGDP    E R M  +  + +   +I+G    F+ +    T A++ 
Sbjct: 64  GNRPIVLAGGATGLIGDPRDVGE-RTMNSADTVADWAGRIRGQLERFVDFDDSPTSAVIE 122

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   +  ID LR++G  FSVN ML+ ++V+ RL+ +  +S+ EF+YM+LQA D++ 
Sbjct: 123 NNMNWTGKMSAIDFLRDVGKHFSVNVMLARDTVKRRLESD-GMSYTEFSYMLLQANDYLH 181

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT-LSGAI 245
           L ++  C LQ+GGSDQWGNII G++L  R+    + A+T PL+T+A G K GK+   G++
Sbjct: 182 LRRDLGCTLQVGGSDQWGNIIAGVELNRRVDGESVHAMTVPLVTSADGKKFGKSTGGGSL 241

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIA 303
           WL+ EMTSPY ++QY+ N  DADV+ + +  T L   E+     A  +     EA+K +A
Sbjct: 242 WLDPEMTSPYAWYQYFVNTGDADVIKYLRWFTFLTADELAELETATAERPHAREAQKRLA 301

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQ--------HMPTISISKDEVSRGMGLLTL 355
            E+TT+VHG         A+   F  +  ++         +   S+S+        ++ L
Sbjct: 302 AEMTTLVHGEHNTRAVELASQALFGKAELAELDESTLAAALKEASVSELAPGEPRTIIDL 361

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +V +G   S   ARR +K     +NN  +S +  +    D      + +  GK+N     
Sbjct: 362 LVTSGLCESKGAARRAVKEGGASVNNQKVSADDWEPAASDLLHGSWLVVRRGKRNFAGVK 421

Query: 416 L 416
           +
Sbjct: 422 I 422


>gi|262091789|gb|ACY25377.1| tyrosyl-tRNA synthetase [uncultured actinobacterium]
          Length = 421

 Score =  495 bits (1276), Expect = e-138,   Method: Composition-based stats.
 Identities = 156/425 (36%), Positives = 236/425 (55%), Gaps = 19/425 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG + Q ++ + L     +   T Y+G+D TA SLHAG+L  L++L   Q  
Sbjct: 2   NLIEDLRWRGLLAQSTDEKALLEAL-KKPTTLYVGFDPTAPSLHAGNLVVLLVLRRFQLA 60

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH PI+L+GG T ++GDPS ++E R +  S+ ++  + +I+   S+F+ +   K  A ++
Sbjct: 61  GHNPIALVGGATGLVGDPSGKNEERTLNSSEIVEAWVNRIRQQVSAFLDFDAPKNPAQVV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   +  I+ LR+IG  FSVN+MLS +SV +RL+    +S+ EF+Y +LQ+YDF+E
Sbjct: 121 NNLDWTSPLSAIEFLRDIGKHFSVNQMLSKDSVSARLEGG-GISYTEFSYQVLQSYDFLE 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L +  +C LQ+GGSDQWGNI+ G+DL  R++     ALT PLL  A GTK GKT  G++W
Sbjct: 180 LYRRNNCTLQVGGSDQWGNIVAGLDLIRRVEQGSGHALTVPLLMKADGTKFGKTAGGSVW 239

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIAT 304
           L+ EMTSPY F+Q+W N DD DV++F K  +     EI  + K   +     EA + +A 
Sbjct: 240 LDPEMTSPYAFFQFWLNSDDKDVINFLKVFSFKSHEEITALEKSHNENPGLREAHRALAR 299

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQ-----------HMPTISI-SKDEVSRGMGL 352
           E+T++VH  E  ++   AA   F     S+            +P  ++ SKDE+      
Sbjct: 300 ELTSLVHSEETTQRVEAAARALFGQGELSELDEVTLASALAELPRTTVSSKDEIP---TW 356

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           + L+   G   S + ARR +K     +NN  IS E  +    DF       L  GK++  
Sbjct: 357 VDLLAATGVVDSKSAARRIVKEGGGYLNNEKISGEDFRPSKSDFLCGKYAVLRKGKRDLA 416

Query: 413 ICHLC 417
              L 
Sbjct: 417 AVELV 421


>gi|224476819|ref|YP_002634425.1| tyrosyl-tRNA synthetase [Staphylococcus carnosus subsp. carnosus
           TM300]
 gi|254783637|sp|B9DN75|SYY_STACT RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|222421426|emb|CAL28240.1| tyrosyl-tRNA synthetase [Staphylococcus carnosus subsp. carnosus
           TM300]
          Length = 420

 Score =  495 bits (1276), Expect = e-138,   Method: Composition-based stats.
 Identities = 149/423 (35%), Positives = 225/423 (53%), Gaps = 20/423 (4%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           ++ L  L  RG I+Q ++   L+ + ++  VT Y G D TA S+H GHL  L+ L   Q 
Sbjct: 3   NELLKDLEWRGLIYQQTDAEGLENILNKEQVTLYCGVDPTADSMHIGHLLPLLTLRRFQN 62

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKPI L+GGGT +IGDPS + + R +   +++++N+  I         + +GK  A +
Sbjct: 63  HGHKPIVLIGGGTGMIGDPSGKTDERVLQTEEQVEQNVRGIGNQMDKIFDF-SGKEAAQL 121

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  WL  I  ID LR+ G    VN ML  +SV+SRL  E  +S+ EF YMILQA DF 
Sbjct: 122 VNNRDWLGKISLIDFLRDYGKHVGVNYMLGKDSVQSRL--ENGISYTEFTYMILQAIDFG 179

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLG-ERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
            L + Y+C++Q+GGSDQWGNI  GI+L        + + +T PL+T A G K GK+ +G 
Sbjct: 180 HLNREYNCKVQIGGSDQWGNITSGIELMRRMYGQTEAYGITIPLVTKADGKKFGKSEAGT 239

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA--KLQGKEINEAKKII 302
           +WL+ E TSPY  +Q+W N  DADV+ F K  T L   EI+R+   K +   + EA+K +
Sbjct: 240 VWLDAEKTSPYELYQFWINTTDADVIKFLKYFTFLDKEEIERLEQSKEEAPHLREAQKAL 299

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGL 352
           A  +   +HG      A   +   F   + +          + +P   +S    +    +
Sbjct: 300 AENVVRFIHGEGALNDAIRISEALFSGDLKALSSDELREGFKDVPQAEVS----NATTNI 355

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           +  IV+AG ++S  +AR  + + AI IN     + K +I   D        +  GKK + 
Sbjct: 356 VDFIVEAGISSSKRQAREDVSNGAIYINGEREQDLKYEISEADKIDNEFTIVRRGKKKYF 415

Query: 413 ICH 415
           +  
Sbjct: 416 MVK 418


>gi|327388836|gb|EGE87184.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae GA04375]
          Length = 415

 Score =  495 bits (1276), Expect = e-138,   Method: Composition-based stats.
 Identities = 153/415 (36%), Positives = 228/415 (54%), Gaps = 17/415 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L ERG I Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  G
Sbjct: 3   IFDELKERGLIFQTTDEEALRKALEEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKP +L+GG T +IGDPSF+D  R +     +   ++ I+G  S F+ +  G+  A+M+N
Sbjct: 63  HKPYALVGGATGLIGDPSFKDAERSLQTKDTVDGWVKSIQGQLSRFLDFENGENKAVMVN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W  SI +ID LR+IG +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF  L
Sbjct: 123 NYDWFGSISFIDFLRDIGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFFVL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            ++++  LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WL
Sbjct: 181 NQDHNVTLQIGGSDQWGNMTAGTELLRRKADKTGHVITVPLITDATGKKFGKSEGNAVWL 240

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATE 305
           N E TSPY  +Q+W N+ DAD V F K  T L + EI+ + K      +E  A+K++A E
Sbjct: 241 NPEKTSPYEMYQFWMNVMDADAVRFLKIFTFLSLDEIEDIRKQFEAAPHERLAQKVLARE 300

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTL 355
           + T+VHG E  ++A     + F  +I +          + +P   +  DE +    ++ L
Sbjct: 301 VVTLVHGEEAYKEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVQADEHN---NIVEL 357

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
           +V +G   S  +AR  +++ AI +N   I +    +   D        +  GKKN
Sbjct: 358 LVSSGIVNSKRQAREDVQNGAIYVNGDRIQDLDYVLSDADKLENELTVIRRGKKN 412


>gi|67459269|ref|YP_246893.1| tyrosyl-tRNA synthetase [Rickettsia felis URRWXCal2]
 gi|75536299|sp|Q4UL45|SYY_RICFE RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|67004802|gb|AAY61728.1| Tyrosyl-tRNA synthetase [Rickettsia felis URRWXCal2]
          Length = 411

 Score =  495 bits (1276), Expect = e-138,   Method: Composition-based stats.
 Identities = 186/409 (45%), Positives = 281/409 (68%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           F+     +G+ HQ ++   L  +  +  + AYIG+D TA+SLH G L Q+M+L  LQ+ G
Sbjct: 3   FIEEFINKGYFHQCTDLDRLTTITKETKIAAYIGFDCTATSLHIGSLMQIMILRLLQQHG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKPI ++GGGTS IGDP+++DE+R+++  ++I +N E IK   S FIK+G G++DA+ML+
Sbjct: 63  HKPIVIIGGGTSKIGDPTWKDEARKILSKEDIAKNAEGIKKSLSKFIKFGEGESDAIMLD 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL S+ Y+D LR+ GS+FSVNRML+ +SVR RL+REQ LSFLEFNYM+LQAYDF  L
Sbjct: 123 NAEWLDSLNYLDFLRDFGSYFSVNRMLTMDSVRLRLEREQHLSFLEFNYMLLQAYDFYYL 182

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
           +K+Y+C LQ+GGSDQWGNI+ G DL  ++    +F +T+PLLTT+SG KMGKT +GA+WL
Sbjct: 183 SKHYNCSLQLGGSDQWGNIVMGADLTRKISGKDVFGMTTPLLTTSSGAKMGKTAAGAVWL 242

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           N+++ SPY+++QYWRN +DAD+V FAK  + L   E+++   L  ++IN AKK +A E+T
Sbjct: 243 NEDLLSPYDYYQYWRNCEDADIVRFAKLYSELTQEELNKFESLAAEDINSAKKQLAYELT 302

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
            + H  + A+ A   A++ F+     +++P + + ++ +  G+    L  +AG A+S +E
Sbjct: 303 KLCHSEQAAKSALETAVKIFEEGQIDENLPIVVLEQEVLQAGISAYELFHEAGLASSKSE 362

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           AR+ ++    KIN+ ++ +E + I          IKLS GKK HI+  +
Sbjct: 363 ARKLIRGKGAKINDRLVEDENMIINTTFLLDKNVIKLSAGKKRHILVRV 411


>gi|282599716|ref|ZP_05971609.2| tyrosine--tRNA ligase [Providencia rustigianii DSM 4541]
 gi|282568354|gb|EFB73889.1| tyrosine--tRNA ligase [Providencia rustigianii DSM 4541]
          Length = 428

 Score =  495 bits (1276), Expect = e-138,   Method: Composition-based stats.
 Identities = 156/422 (36%), Positives = 225/422 (53%), Gaps = 13/422 (3%)

Query: 1   MPAFKS--DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLM 58
           M +  S  + +  L ERG + Q+++   L    +QG ++ Y G+D TA SLH GHL  L+
Sbjct: 1   MESLMSSNNLIKQLQERGLVAQVTDEDALAERLAQGPISLYCGFDPTADSLHLGHLVPLL 60

Query: 59  LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT 118
            L   Q  GHKP++L+GG T +IGDPSF+   R++  ++ +QE +EKI+   S F+ +  
Sbjct: 61  CLKRFQLAGHKPVALVGGATGLIGDPSFKATERKLNTAETVQEWVEKIRNQVSPFLSFDC 120

Query: 119 GKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYM 177
           G   A + NN  W   +  +  LR+IG  FSVN+M++ ESV+ RL R+   +SF EF Y 
Sbjct: 121 GDNSARLANNYDWFGKMDVLTFLRDIGKHFSVNQMINRESVKQRLNRDDVGISFTEFAYN 180

Query: 178 ILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
           +LQ YDF  + K     LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK 
Sbjct: 181 LLQGYDFANMNKEMGVELQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKF 240

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKE 294
           GKT  GA+WL+ + TS Y F+Q+W N  DADV  F K  T + +SEI   +   K  GK 
Sbjct: 241 GKTEGGAVWLDPKKTSQYKFYQFWINTADADVYRFLKFFTFMELSEINALEEEDKNSGKA 300

Query: 295 INEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSR 348
              A+ ++A ++T +VHG      A       F  ++        + +    +    +  
Sbjct: 301 PR-AQYVLAEQVTKLVHGEAGLAAAKRITESLFSGAVSDLTEADLEQLAQDGMPNITLEV 359

Query: 349 GMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGK 408
           G  L   +V +  A S  +AR  + SNA+ IN    +         D        +  GK
Sbjct: 360 GADLQQALVDSELAPSRGQARTAISSNAVSINGQKQTEPMYVFTDADRLFGRFTLIRRGK 419

Query: 409 KN 410
           KN
Sbjct: 420 KN 421


>gi|223933066|ref|ZP_03625059.1| tyrosyl-tRNA synthetase [Streptococcus suis 89/1591]
 gi|330831970|ref|YP_004400795.1| tyrosyl-tRNA synthetase [Streptococcus suis ST3]
 gi|223898253|gb|EEF64621.1| tyrosyl-tRNA synthetase [Streptococcus suis 89/1591]
 gi|329306193|gb|AEB80609.1| tyrosyl-tRNA synthetase [Streptococcus suis ST3]
          Length = 418

 Score =  495 bits (1275), Expect = e-138,   Method: Composition-based stats.
 Identities = 144/417 (34%), Positives = 221/417 (52%), Gaps = 11/417 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L  RG + Q ++   L    ++G V+ Y GYD TA SLH GHL  ++    LQ  
Sbjct: 2   NIFEELKARGLVFQTTDEEALVKALTEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP +L+GG T +IGDPSF+D  R +     +   + KI+G  S F+ +  G   A M+
Sbjct: 62  GHKPYALVGGATGLIGDPSFKDAERSLQTKDTVDGWVTKIQGQLSRFLDFENGDNKAEMV 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I +ID LR++G +++VN M+S +SV+ R+  E  +S+ EF Y I+Q YDF E
Sbjct: 122 NNYDWFSDISFIDFLRDVGKYYTVNYMMSKDSVKKRI--ETGISYTEFAYQIMQGYDFYE 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L   Y+  LQ+GGSDQWGN+  G +L  R        +T PL+T ++G K GK+   A+W
Sbjct: 180 LNDKYNVTLQIGGSDQWGNMTAGTELLRRKADKSGHVMTVPLITDSTGKKFGKSEGNAVW 239

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIAT 304
           L+ + TSPY  +Q+W N+ D D V F K  T L + EI  + K      +E  A+KI+A 
Sbjct: 240 LDADKTSPYEMYQFWLNVMDDDAVRFLKIFTFLSLDEIAEIEKQFDAARHERLAQKILAR 299

Query: 305 EITTMVHGREEAEKAATAAMECFDMSI-------HSQHMPTISISKDEVSRGMGLLTLIV 357
           E+ T+VHG E   +A     + F  +I         Q +  +     +    + ++ L+V
Sbjct: 300 EVVTLVHGEEAYNQALNITEQLFAGNIKNLSAKELKQGLSNVPNYAVQAEDNLNIVELLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +G  TS  +AR  +++ AI +N   + +    +   D        +  GKK + + 
Sbjct: 360 TSGIVTSKRQAREDVQNGAIYVNGERVQDLDYTLSDSDKIDGELTVIRRGKKKYSVL 416


>gi|298694997|gb|ADI98219.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ED133]
          Length = 420

 Score =  495 bits (1275), Expect = e-138,   Method: Composition-based stats.
 Identities = 147/421 (34%), Positives = 227/421 (53%), Gaps = 20/421 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            +  L  RG I+Q ++ + ++ L ++  VT Y G D TA SLH GHL   + L   Q+ G
Sbjct: 5   LIEDLKWRGLIYQQTDEQGIEDLLNKEQVTLYCGADPTADSLHIGHLLPFLTLRRFQEHG 64

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+PI L+GGGT +IGDPS + E R +   +++ +NIE I     +  ++GT    A+++N
Sbjct: 65  HRPIVLIGGGTGMIGDPSGKSEERVLQTEEQVDKNIEGISKQMHNIFEFGTDHG-AVLVN 123

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  I  I  LR+ G    VN ML  +S++SRL  E  +S+ EF Y ILQA DF  L
Sbjct: 124 NRDWLGQISLISFLRDYGKHVGVNYMLGKDSIQSRL--EHGISYTEFTYTILQAIDFGHL 181

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLG-ERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
            +  +C++Q+GGSDQWGNI  GI+L          + LT PL+T + G K GK+ SGA+W
Sbjct: 182 NRELNCKIQVGGSDQWGNITSGIELMRRMYGQTDAYGLTIPLVTKSDGKKFGKSESGAVW 241

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA--KLQGKEINEAKKIIAT 304
           L+ E TSPY F+Q+W N  D DV+ F K  T L   EIDR+   K +   + EA+K +A 
Sbjct: 242 LDAEKTSPYEFYQFWINQSDEDVIKFLKYFTFLGKEEIDRLEQSKNEAPHLREAQKTLAE 301

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLT 354
           E+T  +HG +    A   +   F   + S          + +P +++S    +    ++ 
Sbjct: 302 EVTKFIHGEDALNDAIRISQALFSGDLKSLSAKELKDGFKDVPQVTLS----NNTTNIVE 357

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           ++++ G + S  +AR  + + AI IN     +    +  +D        +  GKK + + 
Sbjct: 358 VLIETGISPSKRQAREDVNNGAIYINGERQQDVSYALAPEDKIDGEFTIIRRGKKKYFMV 417

Query: 415 H 415
           +
Sbjct: 418 N 418


>gi|25010229|ref|NP_734624.1| tyrosyl-tRNA synthetase [Streptococcus agalactiae NEM316]
 gi|81457837|sp|Q8E7K0|SYY_STRA3 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|23094581|emb|CAD45799.1| tyrosyl-tRNA synthetase [Streptococcus agalactiae NEM316]
 gi|319744102|gb|EFV96477.1| tyrosine--tRNA ligase [Streptococcus agalactiae ATCC 13813]
          Length = 419

 Score =  495 bits (1275), Expect = e-138,   Method: Composition-based stats.
 Identities = 149/419 (35%), Positives = 229/419 (54%), Gaps = 11/419 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L ERG + Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  
Sbjct: 2   NIFDELKERGLVFQTTDEDALRKALEEGSVSYYTGYDPTADSLHLGHLVAILTSRRLQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP +L+GG T +IGDPSF+D  R +   + +     KI+G  S+F+++ TG   A+++
Sbjct: 62  GHKPYALVGGATGLIGDPSFKDVERSLQTKETVVSWGNKIRGQLSNFLEFETGDNKAVLV 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W  +I +ID LR++G +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF E
Sbjct: 122 NNYDWFSNISFIDFLRDVGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFYE 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L KNY+  LQ+GGSDQWGN+  G +L  R        +T PL+T ++G K GK+   A+W
Sbjct: 180 LNKNYNVTLQIGGSDQWGNMTAGTELIRRKSNGVSHVMTVPLITDSTGKKFGKSEGNAVW 239

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIAT 304
           L+ + TSPY  +Q+W N+ DAD V F K  T L + EI+  R+   +      A+K +A 
Sbjct: 240 LDADKTSPYEMYQFWLNVMDADAVRFLKIFTFLSLKEIEDIRIQFEEAPHQRLAQKTLAR 299

Query: 305 EITTMVHGREEAEKAATAAMECFDMSI-------HSQHMPTISISKDEVSRGMGLLTLIV 357
           E+ T+VHG +  ++A     + F  +I         Q +  +     +    + ++ L+V
Sbjct: 300 EVVTLVHGEKAYKEAVNITEQLFAGNIKGLSVKELKQGLRGVPNYHVQTEDNLNIIDLLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            +G   S  +AR  + + AI IN   I + +  I   D        +  GKK + + + 
Sbjct: 360 TSGVVNSKRQAREDVSNGAIYINGDRIQDLEYTISENDKLENEITVIRRGKKKYFVLNF 418


>gi|332670182|ref|YP_004453190.1| tyrosyl-tRNA synthetase [Cellulomonas fimi ATCC 484]
 gi|332339220|gb|AEE45803.1| tyrosyl-tRNA synthetase [Cellulomonas fimi ATCC 484]
          Length = 426

 Score =  495 bits (1275), Expect = e-138,   Method: Composition-based stats.
 Identities = 143/415 (34%), Positives = 228/415 (54%), Gaps = 10/415 (2%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L+ RG + Q ++P  L      G V+ Y G+D TA SLH G+L Q++ +  LQ  G
Sbjct: 4   ILDELAWRGLVAQTTDPDALRAALDAGQVSLYCGFDPTAPSLHIGNLVQILTVRRLQDAG 63

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+P +L+GG T +IGDP    E R +     +   +++I+      +++  G + A M+N
Sbjct: 64  HRPFALVGGATGLIGDPKMAGE-RTLNAPDVVAGWVDRIRRQIEPLLRF-DGPSAATMVN 121

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W   +  ID LR++G  F +  ML+ ++V  RL  +Q +SF EF+Y ILQ  D++EL
Sbjct: 122 NLDWTAPMSAIDFLRDVGKHFRLGTMLAKDTVARRLHSDQGISFTEFSYQILQGMDYLEL 181

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            + +   LQ GGSDQWGN++ G++L  +++   + ALT+PL+T A GTK GKT SG +WL
Sbjct: 182 HRRHGVTLQTGGSDQWGNLLSGVELVRKVEGTAVHALTTPLVTKADGTKFGKTESGTVWL 241

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATE 305
           + E+T+PY F+Q+W N DDADVVS+ K  T     EI+ +A+   Q     EA++ +A +
Sbjct: 242 DPELTTPYAFYQFWLNADDADVVSYLKIFTFRTREEIEALAEAVEQRPAAREAQRALAHD 301

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQ-HMPTISISKDEVS-----RGMGLLTLIVKA 359
           +T++VHGR  A+K   A+   F     +     T + +  E+       G  ++ ++  +
Sbjct: 302 VTSLVHGRTAADKVVEASQALFGRGSLADLDEATFAAAVAELPTAPGRAGDPVVDVLAAS 361

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           G  TS   ARR +      +NN  +  E   ++ +D        L  GK+   + 
Sbjct: 362 GIVTSKAAARRAIGEGGASVNNVRVEQEDAVLRPEDLLHGRWAVLRRGKRTLAVV 416


>gi|239946891|ref|ZP_04698644.1| tyrosyl-tRNA synthetase [Rickettsia endosymbiont of Ixodes
           scapularis]
 gi|239921167|gb|EER21191.1| tyrosyl-tRNA synthetase [Rickettsia endosymbiont of Ixodes
           scapularis]
          Length = 411

 Score =  495 bits (1275), Expect = e-138,   Method: Composition-based stats.
 Identities = 189/409 (46%), Positives = 279/409 (68%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           F+     +G+ HQ ++   L  +  +  + AYIG+D TA+SLH G L Q+M+L  LQ+ G
Sbjct: 3   FIEEFINKGYFHQCTDLDRLTAITKETKIAAYIGFDCTATSLHIGSLMQIMILRLLQQYG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKPI ++GGGTS IGDPS +DE+R+ +   +I+ N E IK   S FIK+G GK+DA+ML+
Sbjct: 63  HKPIVIIGGGTSKIGDPSGKDEARKALTKDDIKRNAEGIKKSLSKFIKFGDGKSDAIMLD 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL S+ Y+D LR+ GS+FSVNRML+ +SVR RL+REQ LSFLEFNYM+LQAYDF  L
Sbjct: 123 NAEWLDSLNYLDFLRDFGSYFSVNRMLTMDSVRLRLEREQHLSFLEFNYMLLQAYDFYYL 182

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
           +K+Y+C LQ+GGSDQWGNI+ G DL  ++   ++F +T+PLLTT+SG KMGKT  GA+WL
Sbjct: 183 SKHYNCSLQLGGSDQWGNIVMGADLIRKISGKEVFGMTTPLLTTSSGAKMGKTAVGAVWL 242

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           N+++ SPY+++QYWRN +DADV+ FAK  + L   E+++   L  ++IN AKK +A E+T
Sbjct: 243 NEDLLSPYDYYQYWRNCEDADVIRFAKLYSELTSEELNKFESLAAEDINAAKKQLAYELT 302

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
            + H  + A+ A   A++ F+     +++PT+ + ++ +  G+    L  +AG ATS +E
Sbjct: 303 KLCHSEQAAKSALKTAVKIFEEGQIDENLPTVVLEQEVLQAGISAYELFHEAGLATSKSE 362

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            R+ ++    KIN+ ++++E + I          IKLS GKK HI+  +
Sbjct: 363 TRKLIRGKGAKINDELVADENMIINTNFLLDKNVIKLSAGKKRHILVRI 411


>gi|313633051|gb|EFR99966.1| tyrosyl-tRNA synthetase [Listeria seeligeri FSL N1-067]
 gi|313638014|gb|EFS03301.1| tyrosyl-tRNA synthetase [Listeria seeligeri FSL S4-171]
          Length = 419

 Score =  495 bits (1275), Expect = e-138,   Method: Composition-based stats.
 Identities = 153/422 (36%), Positives = 220/422 (52%), Gaps = 21/422 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG I+Q ++   L     +  ++ Y G D +  S+H GHL   M+L   Q  
Sbjct: 2   NIIDELEWRGAIYQQTDEEGLRKWVEEKQISLYCGIDPSGDSMHIGHLIPFMILRRFQNA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI L+GG T  IGDPS + E R++   ++I +N+E ++        +  G + A M+
Sbjct: 62  GHRPIILVGGATGTIGDPSGKKEERQLQSMEQISKNVESLRVQLGKIFDF-EGDSAASMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   +  +D LR+ G  F+VN MLS + V SRL  E  +SF EF Y ILQA DF  
Sbjct: 121 NNYDWTKDVSILDFLRDYGKEFNVNTMLSKDIVASRL--EVGISFTEFAYQILQAMDFNH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSGA 244
           L +  DCRLQ+GGSDQWGNI  G+DL  + +    K F LT PLLT A GTK GK+  GA
Sbjct: 179 LYEFNDCRLQIGGSDQWGNITAGLDLIRKKQGENAKAFGLTIPLLTKADGTKFGKSEGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKII 302
           IWLN E T+PY F+Q+W N DD DVV + K  T L  +EI  +AK   +   +  A+K +
Sbjct: 239 IWLNPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLTEAEIADLAKQVEEEPHLRAAQKTL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGL 352
           A E+T  VH  E   +A   +   F   + +          + +PT    + E    M L
Sbjct: 299 AAEMTKFVHSEEALAQALKISKALFSGDVKALTATEIEQGFKDVPTFEAEEAE----MNL 354

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           +  +V  G   S  +AR  + + AI IN   + + +  +   D        +  GKK + 
Sbjct: 355 VDWLVSLGIEPSKRQAREDVANGAIYINGERLQDLEKVMDASDRIENKFTIVRRGKKKYF 414

Query: 413 IC 414
           + 
Sbjct: 415 LV 416


>gi|307244426|ref|ZP_07526537.1| tyrosine--tRNA ligase [Peptostreptococcus stomatis DSM 17678]
 gi|306492245|gb|EFM64287.1| tyrosine--tRNA ligase [Peptostreptococcus stomatis DSM 17678]
          Length = 407

 Score =  495 bits (1275), Expect = e-138,   Method: Composition-based stats.
 Identities = 168/394 (42%), Positives = 238/394 (60%), Gaps = 5/394 (1%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
                L  RG I QI+N  E+  L + G    Y+G+D TA SLH GH   L ++  LQ  
Sbjct: 2   GVFEELQARGLIAQITNEEEIRNLVNTGKAVFYLGFDPTADSLHVGHFMALSMMRRLQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           G+KP+ L+GGGT  IGDPS R + R MM  + IQ N +  K   S FI +   K  A+M+
Sbjct: 62  GNKPVVLVGGGTGYIGDPSGRTDMRTMMTPETIQHNCDCFKVQMSKFIDFSDDK--AIMV 119

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  + YID+LRE+G  FSVN ML  E  ++R+  E+ LSFLEFNYM++Q+YDF  
Sbjct: 120 NNADWLLKLNYIDMLREVGPHFSVNNMLRAECYKNRM--EKGLSFLEFNYMVMQSYDFYH 177

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L K Y C +Q+GG+DQW N++ G +L  R       A+T PLLT A GTKMGKT  GA+W
Sbjct: 178 LYKEYGCNIQLGGNDQWSNLLGGTELIRRKLGEDAHAMTIPLLTKADGTKMGKTAGGAVW 237

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           L+   TSP++F+QYWRN+DDADV++F K+LT L + EI  M   +G ++NEAK+++A E+
Sbjct: 238 LDPNKTSPFDFYQYWRNVDDADVINFIKKLTFLTLEEIKPMEAWEGAKLNEAKELLAYEM 297

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATST 365
           T +VH  E+A+KA  A+   F       +MPT  I   +++ G + +  L+++     S 
Sbjct: 298 TRLVHSEEDAKKAQEASKALFAGGADDSNMPTTEIDPAKLTDGAINVTDLMLECDLVPSR 357

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDST 399
           +E RR ++   + I +  + +  L I L D    
Sbjct: 358 SEVRRLVQQGGLTIADKKVEDLNLTISLDDLKEG 391


>gi|253732378|ref|ZP_04866543.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|253723900|gb|EES92629.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
          Length = 420

 Score =  495 bits (1275), Expect = e-138,   Method: Composition-based stats.
 Identities = 148/421 (35%), Positives = 227/421 (53%), Gaps = 20/421 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            +  L  RG I+Q ++ + ++ L ++  VT Y G D TA SLH GHL   + L   Q+ G
Sbjct: 5   LIEDLKWRGLIYQQTDEQGIEDLLNKEQVTLYCGADPTADSLHIGHLLPFLTLRRFQEHG 64

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+PI L+GGGT +IGDPS + E R +   +++ +NIE I     +  ++GT    A+++N
Sbjct: 65  HRPIVLIGGGTGMIGDPSGKSEERVLQTEEQVDKNIEGISKQMHNIFEFGTDHG-AVLVN 123

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  I  I  LR+ G    VN ML  +S++SRL  E  +S+ EF Y ILQA DF  L
Sbjct: 124 NRDWLGQISLISFLRDYGKHVGVNYMLGKDSIQSRL--EHGISYTEFTYTILQAIDFGHL 181

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLG-ERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
            +  +C++Q+GGSDQWGNI  GI+L          + LT PL+T + G K GK+ SGA+W
Sbjct: 182 NRELNCKIQVGGSDQWGNITSGIELMRRMYGQTDAYGLTIPLVTKSDGKKFGKSESGAVW 241

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA--KLQGKEINEAKKIIAT 304
           L+ E TSPY F+Q+W N  D DV+ F K  T L   EIDR+   K +   + EA+K +A 
Sbjct: 242 LDAEKTSPYEFYQFWINQSDEDVIKFLKYFTFLGKEEIDRLEQSKNEAPHLREAQKTLAE 301

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLT 354
           E+T  +HG +    A   +   F   + S          + +P +++S D       ++ 
Sbjct: 302 EVTKFIHGEDALNDAIRISQALFSGDLKSLSAKELKDGFKDVPQVTLSNDT----TNIVE 357

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           ++++ G + S  +AR  + + AI IN     +    +  +D        +  GKK + + 
Sbjct: 358 VLIETGISPSKRQAREDVNNGAIYINGERQQDVNYALAQEDKIDGEFTIIRRGKKKYFMV 417

Query: 415 H 415
           +
Sbjct: 418 N 418


>gi|91205726|ref|YP_538081.1| tyrosyl-tRNA synthetase [Rickettsia bellii RML369-C]
 gi|122425472|sp|Q1RI22|SYY_RICBR RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|91069270|gb|ABE04992.1| Tyrosyl-tRNA synthetase [Rickettsia bellii RML369-C]
          Length = 411

 Score =  495 bits (1274), Expect = e-138,   Method: Composition-based stats.
 Identities = 191/409 (46%), Positives = 279/409 (68%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           F+     +G+ HQ ++   L  +  +  + AYIG+D TA+SLH G L Q+M+L  LQK G
Sbjct: 3   FIEEFINKGYFHQCTDLERLTSITKESKIAAYIGFDCTATSLHIGSLMQIMILRLLQKHG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKPI ++GGGTS IGDPS +DE+R+ +  ++I  N E IK   S FIK+G G++DA+ML+
Sbjct: 63  HKPIVIIGGGTSKIGDPSGKDEARKTITKEDIARNAEGIKKSLSKFIKFGDGESDAIMLD 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL S+ Y+D LR+ GS FSVNRML+ +SV+ RL+REQ LSFLEFNYM+LQAYDF  L
Sbjct: 123 NAEWLDSLYYLDFLRDFGSHFSVNRMLTMDSVKLRLEREQHLSFLEFNYMLLQAYDFYYL 182

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
           +K+Y+C LQ+GGSDQWGNI+ G DL  ++ + ++F +T+PLLTTASG KMGKT +GA+WL
Sbjct: 183 SKHYNCSLQLGGSDQWGNIVMGADLTRKISSKEVFGMTTPLLTTASGAKMGKTAAGAVWL 242

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           N+++ SPY+++QYWRN +DAD+V FAK  + L   E+     L  ++IN AKK +A E+T
Sbjct: 243 NEDLLSPYDYYQYWRNCEDADIVRFAKLYSELTNEELVVFENLAAEDINAAKKQLAYELT 302

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
            + HG++EA+ A   +++ F+     +++ TI +  + +  G+    L  +AG ATS +E
Sbjct: 303 KLCHGKQEAKNALETSVKIFEQGQIDENLTTIVLEPEMLQAGITAFELFHEAGLATSKSE 362

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           AR+ ++    K+N+ +I +E + I          IKLS GKK HI+  +
Sbjct: 363 ARKLIRGKGAKVNDQLIEDENMVINTTFLLDNKVIKLSAGKKRHILVKI 411


>gi|65322029|ref|ZP_00394988.1| COG0162: Tyrosyl-tRNA synthetase [Bacillus anthracis str. A2012]
          Length = 418

 Score =  495 bits (1274), Expect = e-138,   Method: Composition-based stats.
 Identities = 153/418 (36%), Positives = 227/418 (54%), Gaps = 11/418 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
             L  L  RG I+Q ++   L+ L  +  V  Y G+D TA SLH GH+  +++L   Q  
Sbjct: 2   GILQDLEFRGLINQQTDAEGLEQLLEKESVKLYCGFDPTADSLHIGHMLPVLMLRRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI+L+GGGT +IGDPS +   R +     +    E IK   S+F+++   +  A M 
Sbjct: 62  GHQPIALVGGGTGMIGDPSGKKAERTLNTKDTVAYYTESIKNQLSNFLEFENVENPATMA 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL ++  I  LR+IG  F +N ML+ ++V SRL  E  +SF EF+YMILQ+YDF+ 
Sbjct: 122 NNYDWLGNLDVISFLRDIGKNFGLNYMLAKDTVASRL--ETGISFTEFSYMILQSYDFLN 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGER-LKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           L ++++CRLQ+GGSDQWGNI  G++L  +  +  K F LT PL+T + GTK GKT  GAI
Sbjct: 180 LYQHHNCRLQIGGSDQWGNITAGLELIRKSEEDAKAFGLTIPLVTKSDGTKFGKTEGGAI 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIA 303
           WL+ E T+PY F+Q+W N DD DVV + K  T L   EI  + K   +  E   A+K + 
Sbjct: 240 WLDPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLSHEEILELEKQVAEAPEKRAAQKALG 299

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRGMGLLTLIV 357
            E+T +VHG E  E+A   +   F  S+       I        S +  +    L+ L+V
Sbjct: 300 AEMTKLVHGEEALEQAIKISAALFSGSVAELTASEIEQGFKDVPSVERTAEDTVLIDLLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           ++  + S  +AR  + + A  +N          +  +D        +  GKK + +  
Sbjct: 360 ESKISPSKRQAREDVTNGAXYVNGERTQALDYVVXEKDRIEGKFTIIRRGKKKYFLIR 417


>gi|226360087|ref|YP_002777865.1| tyrosyl-tRNA synthetase [Rhodococcus opacus B4]
 gi|226238572|dbj|BAH48920.1| tyrosyl-tRNA synthetase [Rhodococcus opacus B4]
          Length = 425

 Score =  495 bits (1274), Expect = e-138,   Method: Composition-based stats.
 Identities = 144/421 (34%), Positives = 225/421 (53%), Gaps = 13/421 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L+ RG I Q ++   L      G VT Y G+D T  SLHAGHL  L+ L   Q+ 
Sbjct: 4   NIIDELTWRGLIAQSTDLDALRRDLDAGPVTLYAGFDPTGPSLHAGHLVPLLALKRFQRA 63

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           G++PI L GG T +IGDP    E R M  +  + E  ++I+G    F+ +    + A++ 
Sbjct: 64  GNRPIVLAGGATGLIGDPRDVGE-RTMNSADTVAEWADRIRGQLERFVDFDDSPSGAVIE 122

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   +  ID LR++G  FSVN ML+ ++V+ RL+ +  +S+ EF+YM+LQA D++ 
Sbjct: 123 NNMNWTGKLSAIDFLRDVGKHFSVNVMLARDTVKRRLETD-GMSYTEFSYMLLQANDYLH 181

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT-LSGAI 245
           L +++ C LQ+GGSDQWGNII G++L  R+    +  LT PL+T+A G K GK+   G++
Sbjct: 182 LRRSHGCSLQVGGSDQWGNIIAGVELNRRVDAASVHGLTVPLVTSADGKKFGKSTGGGSL 241

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIA 303
           WL+ EMTSPY ++QY+ N  DADV+ + +  T L   E+     A  +     EA++ +A
Sbjct: 242 WLDPEMTSPYAWYQYFVNTGDADVIKYLRWFTFLSAEELAELETATAERPHAREAQRRLA 301

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQ--------HMPTISISKDEVSRGMGLLTL 355
            E+TT+VHG         A+   F  +             +   S+++        ++ L
Sbjct: 302 AEMTTLVHGEANTRAVELASQALFGRAELQDLDEPTLGAALREASVAELAPGEPSSIVDL 361

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +V +G   S   ARR +K     +NN  IS+E    +  D      + +  GK+N     
Sbjct: 362 LVLSGLCESKGAARRAVKEGGASVNNQKISSEDWTPESGDLLHGTWLVVRRGKRNFAGVK 421

Query: 416 L 416
           +
Sbjct: 422 V 422


>gi|289434878|ref|YP_003464750.1| hypothetical protein lse_1513 [Listeria seeligeri serovar 1/2b str.
           SLCC3954]
 gi|289171122|emb|CBH27664.1| tyrS [Listeria seeligeri serovar 1/2b str. SLCC3954]
          Length = 419

 Score =  494 bits (1273), Expect = e-138,   Method: Composition-based stats.
 Identities = 152/422 (36%), Positives = 220/422 (52%), Gaps = 21/422 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG I+Q ++   L     +  ++ Y G D +  S+H GHL   M+L   Q  
Sbjct: 2   NIIDELEWRGAIYQQTDEEGLRKWVEEKQISLYCGIDPSGDSMHIGHLIPFMILRRFQNA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI L+GG T  IGDPS + E R++   ++I +N+E ++        +  G + A M+
Sbjct: 62  GHRPIILVGGATGTIGDPSGKKEERQLQSMEQISKNVESLRVQLGKIFDF-EGDSAASMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   +  +D LR+ G  F+VN MLS + V SRL  E  +SF EF Y ILQA DF  
Sbjct: 121 NNYDWTKDVSILDFLRDYGKEFNVNTMLSKDIVASRL--EVGISFTEFAYQILQAMDFNH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSGA 244
           L +  DCRLQ+GGSDQWGNI  G+DL  + +    K F LT PLLT A GTK GK+  GA
Sbjct: 179 LYEFNDCRLQIGGSDQWGNITAGLDLIRKKQGENAKAFGLTIPLLTKADGTKFGKSEGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKII 302
           IWLN E T+PY F+Q+W N DD DV+ + K  T L  +EI  +AK   +   +  A+K +
Sbjct: 239 IWLNPEKTTPYEFYQFWINTDDRDVIKYLKYFTFLTEAEIADLAKQVEEEPHLRAAQKTL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGL 352
           A E+T  VH  E   +A   +   F   + +          + +PT    + E    M L
Sbjct: 299 AAEMTKFVHSEEALAQALKISKALFSGDVKALTATEIEQGFKDVPTFEAEETE----MNL 354

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           +  +V  G   S  +AR  + + AI IN   + + +  +   D        +  GKK + 
Sbjct: 355 VDWLVSLGIEPSKRQAREDVANGAIYINGERLQDLEKVMDASDRIENKFTIVRRGKKKYF 414

Query: 413 IC 414
           + 
Sbjct: 415 LV 416


>gi|166033543|ref|ZP_02236372.1| hypothetical protein DORFOR_03269 [Dorea formicigenerans ATCC
           27755]
 gi|166026728|gb|EDR45485.1| hypothetical protein DORFOR_03269 [Dorea formicigenerans ATCC
           27755]
          Length = 407

 Score =  494 bits (1273), Expect = e-138,   Method: Composition-based stats.
 Identities = 184/412 (44%), Positives = 254/412 (61%), Gaps = 9/412 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
                L  RG I Q+++   +  L + G  T YIG+D TA SLH GH   L L+  LQ+ 
Sbjct: 2   GIYEELQARGLIAQVTDEERIRDLVNNGKATFYIGFDPTADSLHVGHFMALCLMKRLQEA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           G+KPI+L+GGGT  IGDPS R + R MM  ++IQ N +  K   S FI +  GK  ALM+
Sbjct: 62  GNKPIALIGGGTGYIGDPSGRTDMRSMMTPEQIQHNCDCFKKQMSRFIDFSDGK--ALMV 119

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  + YI++LREIG  FSVNRML+ E  + R+  E+ LSFLEFNYMI+QAYDF E
Sbjct: 120 NNADWLLGLNYIEVLREIGPHFSVNRMLTAECYKQRM--EKGLSFLEFNYMIMQAYDFYE 177

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + Y C L+ GG DQW N++ G +L  R       A+T  LL  + G KMGKT SGA+W
Sbjct: 178 LFQKYGCNLEFGGDDQWSNMLAGTELIRRKLGKDASAMTITLLLNSEGKKMGKTQSGAVW 237

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           L+   TSP+ F+QYWRN+ DADV+   + LT LP+ EID M K +G E+N+AK+I+A E+
Sbjct: 238 LDPNKTSPFEFYQYWRNVGDADVLKCIRMLTFLPLEEIDAMDKWEGAELNKAKEILAFEL 297

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATST 365
           T++VHG EEA+KA  AA   F     +  MP   +++ +++ G + ++TL+VK G   S 
Sbjct: 298 TSLVHGEEEAKKAQEAAKALFSTGAAA-DMPKTELTEADLTDGNIDIMTLLVKCGLTASK 356

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH--IICH 415
           +EARR ++   + ++   I++       +DF   G I L  GKKN   +I  
Sbjct: 357 SEARRAVQQGGVSVDGEKITDIAHTFAGEDFGGEG-IVLKKGKKNFRKVIVK 407


>gi|291520360|emb|CBK75581.1| tyrosyl-tRNA synthetase [Butyrivibrio fibrisolvens 16/4]
          Length = 406

 Score =  494 bits (1273), Expect = e-138,   Method: Composition-based stats.
 Identities = 173/409 (42%), Positives = 248/409 (60%), Gaps = 7/409 (1%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG I Q++N  E+  L ++G  T YIG+D TA SL AGH   L L+  LQ  G
Sbjct: 3   IYDELVARGLIAQVTNEEEIKKLINEGKATFYIGFDCTADSLTAGHFMALTLMKRLQMAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           +KPI+L+GGGT++IGDPS R + R+M+  ++I  N E  K     FI +  GK  ALM+N
Sbjct: 63  NKPIALIGGGTTMIGDPSGRTDMRKMLTREDIDHNAECFKRQMERFIDFSDGK--ALMVN 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  + Y+DLLRE+G+ FSVN ML  E  + R+  E+ LSFLEFNYMI+Q+YDF  +
Sbjct: 121 NADWLLDLNYVDLLREVGACFSVNNMLRAECYKQRM--EKGLSFLEFNYMIMQSYDFYYM 178

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            + Y+C L+ GG DQW N++ G +L  R       A+T  LLT + G KMGKT   A+WL
Sbjct: 179 FQKYNCNLEFGGDDQWSNMLGGTELIRRKLGKDAHAMTITLLTDSQGKKMGKTAGNAVWL 238

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           +   T+P+ F+QYWRN+ DADV+   + LT LP+ EI +M   +G ++NEAK I+A E+T
Sbjct: 239 DPNKTTPFEFYQYWRNVGDADVLKCIRMLTFLPIEEIQKMDTWEGAQLNEAKDILAYELT 298

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTN 366
            MVHG EEA+KA  A+   F    +S+++PT ++S D+   G + +L ++V AG + S  
Sbjct: 299 QMVHGTEEADKAREASKALFAGGANSENIPTHTLSADDFRDGKVDILQILVSAGLSASRA 358

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           EARR+++   + +N   + +     +   F       L  GKK+     
Sbjct: 359 EARRNVQQGGVSVNGEKVVDPFAAYEKSAFAE--EFLLKKGKKSFCKIE 405


>gi|146319969|ref|YP_001199680.1| tyrosyl-tRNA synthetase [Streptococcus suis 98HAH33]
 gi|253751034|ref|YP_003024175.1| tyrosyl-tRNA synthetase [Streptococcus suis SC84]
 gi|253752935|ref|YP_003026075.1| tyrosyl-tRNA synthetase [Streptococcus suis P1/7]
 gi|253754759|ref|YP_003027899.1| tyrosyl-tRNA synthetase [Streptococcus suis BM407]
 gi|189029779|sp|A4VYU1|SYY_STRS2 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|145690775|gb|ABP91280.1| Tyrosyl-tRNA synthetase [Streptococcus suis 98HAH33]
 gi|251815323|emb|CAZ50892.1| putative tyrosyl-tRNA synthetase [Streptococcus suis SC84]
 gi|251817223|emb|CAZ54947.1| putative tyrosyl-tRNA synthetase [Streptococcus suis BM407]
 gi|251819180|emb|CAR44342.1| putative tyrosyl-tRNA synthetase [Streptococcus suis P1/7]
 gi|292557577|gb|ADE30578.1| Tyrosyl-tRNA synthetase [Streptococcus suis GZ1]
 gi|319757286|gb|ADV69228.1| tyrosyl-tRNA synthetase [Streptococcus suis JS14]
          Length = 418

 Score =  494 bits (1273), Expect = e-137,   Method: Composition-based stats.
 Identities = 142/417 (34%), Positives = 220/417 (52%), Gaps = 11/417 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L  RG + Q ++   L    ++G V+ Y GYD TA SLH GHL  ++    LQ  
Sbjct: 2   NIFEELKARGLVFQTTDEEALVKALTEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP +L+GG T +IGDPSF+D  R +     +   + KI+G  S F+ +  G   A M+
Sbjct: 62  GHKPYALVGGATGLIGDPSFKDAERSLQTKDTVDGWVTKIQGQLSRFLDFENGDNKAEMV 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I +ID LR++G +++VN M+S +SV+ R+  E  +S+ EF Y I+Q YDF E
Sbjct: 122 NNYDWFSDISFIDFLRDVGKYYTVNYMMSKDSVKKRI--ETGISYTEFAYQIMQGYDFYE 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L   ++  LQ+GGSDQWGN+  G +L  R        +T PL+T ++G K GK+   A+W
Sbjct: 180 LNDKHNVTLQIGGSDQWGNMTAGTELLRRKADKSGHVMTVPLITDSTGKKFGKSEGNAVW 239

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIAT 304
           L+ + TSPY  +Q+W N+ D D V F K  T L + EI  + K      +E  A+KI+A 
Sbjct: 240 LDADKTSPYEMYQFWLNVMDDDAVRFLKIFTFLSLDEIAEIEKQFDAARHERLAQKILAK 299

Query: 305 EITTMVHGREEAEKAATAAMECFDMSI-------HSQHMPTISISKDEVSRGMGLLTLIV 357
           E+ T+VHG E   +A     + F  +I         Q +  +     +    + ++ L+V
Sbjct: 300 EVVTLVHGEEAYNQALNITEQLFAGNIKNLSAKELKQGLSNVPNYAVQAEDNLNIVELLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +G   S  +AR  +++ AI +N   + +    +   D        +  GKK + + 
Sbjct: 360 TSGIVNSKRQAREDVQNGAIYVNGERVQDLDYTLSDSDKIDGELTVIRRGKKKYSVL 416


>gi|269795517|ref|YP_003314972.1| tyrosyl-tRNA synthetase [Sanguibacter keddieii DSM 10542]
 gi|269097702|gb|ACZ22138.1| tyrosyl-tRNA synthetase [Sanguibacter keddieii DSM 10542]
          Length = 420

 Score =  494 bits (1273), Expect = e-137,   Method: Composition-based stats.
 Identities = 151/418 (36%), Positives = 226/418 (54%), Gaps = 12/418 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           ++ L  L+ RG I Q ++   L      G VT Y G+D TA SLH GHL QL+LL  LQ 
Sbjct: 2   TNVLDELTWRGLISQTTDMDALREALDGGPVTYYCGFDPTAPSLHHGHLVQLVLLRHLQL 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+PI+L+GG T +IGDP    E R +   + + E +E+++   S F+ +  G   A M
Sbjct: 62  AGHRPIALVGGATGLIGDPRMSGE-RVLNSREVVGEWVERLRSQISRFLDF-DGDNPAQM 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  W   +  ID LR+IG  + +  ML+ ++V  RL+  + LSF EF+Y ILQ  D++
Sbjct: 120 VNNLDWTGELTAIDFLRDIGKHYRMGTMLAKDTVARRLESSEGLSFTEFSYQILQGIDYL 179

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           EL + + C LQ GG+DQWGN++ G++L  + +   + ALT+PL+T A GTK GK+  GA+
Sbjct: 180 ELNRRHGCTLQTGGNDQWGNLLSGVELVRKSEQRSVHALTTPLITKADGTKFGKSEGGAV 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKIIA 303
           WL+ EM SPY F+Q+W N DDADVV F K  T     EID   +A  +     EA++ +A
Sbjct: 240 WLDPEMMSPYAFYQFWLNADDADVVRFLKIFTFRSAEEIDELAVAVAERPAAREAQRALA 299

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS-------ISKDEVSRGMGLLTLI 356
            ++T++VHG    E A  A+   F     S  +   +       +   E + G  ++ L+
Sbjct: 300 GDVTSLVHGARATEAAVAASQALFGRGELS-ALDEATLVAAVAGLPSAEGAPGDLVVDLL 358

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           V+     S   ARR +    + +NN  +  +   +   D        L  GKK   + 
Sbjct: 359 VETQLVASKGAARRAVAEGGVYVNNVKVVGDDATLAAADLLQGRAAVLRRGKKTLGVV 416


>gi|34540106|ref|NP_904585.1| tyrosyl-tRNA synthetase [Porphyromonas gingivalis W83]
 gi|81417819|sp|Q7MXD8|SYY_PORGI RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|34396417|gb|AAQ65484.1| tyrosyl-tRNA synthetase [Porphyromonas gingivalis W83]
          Length = 430

 Score =  494 bits (1272), Expect = e-137,   Method: Composition-based stats.
 Identities = 151/428 (35%), Positives = 229/428 (53%), Gaps = 22/428 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG IH I    E     ++G+ +AY+G D TA SLH GHL  +M+L   Q+ 
Sbjct: 2   NFVEELRWRGMIHDIMPGTE--EHLNKGMTSAYVGIDPTADSLHIGHLVGVMMLRHFQRA 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG-TGKTDALM 125
           GH+PI+L+GG T +IGDPS +   R ++    ++ N + IK   + F+ +       A +
Sbjct: 60  GHRPIALIGGATGMIGDPSMKSAERVLLDEATLRHNQDCIKQQLAKFLDFDSDAPNAAKL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQAYD 183
           +NN  W+    ++  +R+IG   +VN M++ +SV+ RL  E    LSF EF+Y +LQ YD
Sbjct: 120 VNNYDWMKDYSFLGFIRDIGKHITVNYMMAKDSVKKRLSAESSTGLSFTEFSYQLLQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           ++ L +N  CRLQMGGSDQWGNI  G +L  R    + FALT PL+T A G K GKT SG
Sbjct: 180 YLYLYRNEGCRLQMGGSDQWGNITTGTELIRRKDGGEAFALTCPLITKADGGKFGKTESG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA--KLQGKEINEAKKI 301
            IWL+   TSPY F+Q+W N+ DAD   + K  T L   EI  +A  + +   +   +K 
Sbjct: 240 NIWLDPARTSPYAFYQFWLNVSDADAEKYIKIFTGLNQDEIAELASRQAEAPHLRPLQKR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQ--------------HMPTISISKDEVS 347
           +A EIT MVH RE  + A  A+   F  S   Q               +P   + +  ++
Sbjct: 300 LAEEITVMVHSREAYDAAVEASEILFGKSTTEQLRKLDEATLLDVFAGVPQYHVERSRIA 359

Query: 348 RGMGLLTLIVKA-GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+ L+ L+  A     S  E R+ +K+  + +N   +++ +  +   D  S   +    
Sbjct: 360 TGISLVDLLADATDIFPSKGELRKTVKAGGVSLNKEKVADAEQTVGEDDLLSDRYLLAQK 419

Query: 407 GKKNHIIC 414
           GKK++ + 
Sbjct: 420 GKKSYYLI 427


>gi|315303381|ref|ZP_07873993.1| tyrosyl-tRNA synthetase [Listeria ivanovii FSL F6-596]
 gi|313628249|gb|EFR96770.1| tyrosyl-tRNA synthetase [Listeria ivanovii FSL F6-596]
          Length = 419

 Score =  494 bits (1272), Expect = e-137,   Method: Composition-based stats.
 Identities = 154/422 (36%), Positives = 220/422 (52%), Gaps = 21/422 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG I+Q ++   L     +  ++ Y G D +  S+H GHL   M+L   Q  
Sbjct: 2   NIIDELEWRGAIYQQTDEEGLRKWVEEKQISLYCGIDPSGDSMHIGHLIPFMILRRFQNA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI L+GG T  IGDPS + E R++   ++I +N+E ++        +  G + A M+
Sbjct: 62  GHRPIILVGGATGTIGDPSGKKEERQLQSIEQISKNVESLRVQLGKIFDF-EGDSAASMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   +  +D LR+ G  F+VN MLS + V SRL  E  +SF EF Y ILQA DF  
Sbjct: 121 NNYDWTKDVSILDFLRDYGKEFNVNTMLSKDIVASRL--EVGISFTEFAYQILQAMDFNH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSGA 244
           L +  DCRLQ+GGSDQWGNI  G+DL  + +    K F LT PLLT A GTK GK+  GA
Sbjct: 179 LYEFNDCRLQIGGSDQWGNITAGLDLIRKKQGENAKAFGLTIPLLTKADGTKFGKSEGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKII 302
           IWLN E T+PY F+Q+W N DD DVV + K  T L  +EI  +AK   +   +  A+K +
Sbjct: 239 IWLNPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLTEAEIADLAKQVEEEPHLRAAQKTL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGL 352
           A E+T  VH  E   +A   +   F   + +          + +PT    + E    M L
Sbjct: 299 AAEMTKFVHSEEALAQALKISKALFSGDVKALTATEIEQGFKDVPTFEAEEAE----MNL 354

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           +  +V  G   S  +AR  + + AI IN   + + +  I   D        +  GKK + 
Sbjct: 355 VDWLVSLGVEPSKRQAREDVMNGAIYINGERVQDLEKAIGESDRIENKFTIVRRGKKKYF 414

Query: 413 IC 414
           + 
Sbjct: 415 LI 416


>gi|229032711|ref|ZP_04188672.1| Tyrosyl-tRNA synthetase [Bacillus cereus AH1271]
 gi|228728606|gb|EEL79621.1| Tyrosyl-tRNA synthetase [Bacillus cereus AH1271]
          Length = 419

 Score =  494 bits (1272), Expect = e-137,   Method: Composition-based stats.
 Identities = 149/424 (35%), Positives = 220/424 (51%), Gaps = 21/424 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG I+Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  
Sbjct: 2   NIIDELEWRGAINQQTDEEGLRKLVEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P+ L+GG T  IGDPS R   R++   + +Q N++ +         +G G ++  M+
Sbjct: 62  GHHPVILIGGATGTIGDPSGRQSERQLQTLEVVQHNVDALTAQMKKLFDFG-GNSEVKMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I  I+ LR+ G  FS+N ML+ + V SRL  +  +SF EF Y ILQA DF  
Sbjct: 121 NNYDWTHEINIIEFLRDYGKNFSINSMLAKDIVASRL--DTGISFTEFTYQILQAMDFHH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKLFALTSPLLTTASGTKMGKTLSGA 244
           L    D +LQ+GGSDQWGNI  G+DL  +L+    K+F LT PLL  + GTK GK+  GA
Sbjct: 179 LYTKEDVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSAGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA--KLQGKEINEAKKII 302
           +WL+ E T+P+ F+Q+W N DD DVV + K  T L    ID +A          EA+K++
Sbjct: 239 VWLDPEKTTPFEFYQFWLNTDDRDVVKYLKYFTFLTKERIDELAVKVETEPHKREAQKVL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGL 352
           A E+T  VHG E   +A       F   I S          + MPT   SK+       +
Sbjct: 299 AEEMTKFVHGEEAFSQAVKITAALFSGDIKSLTADEIEQGFKEMPTFESSKET----KNI 354

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           +  +V  G   S  +AR  + + AI +N   +++    + +++      I +  GKKN+ 
Sbjct: 355 VEWLVDLGIEPSRRQAREDINNGAISMNGEKVTDVGTDVTVENSFDGRFIIIRKGKKNYS 414

Query: 413 ICHL 416
           +  L
Sbjct: 415 LVKL 418


>gi|330684055|gb|EGG95811.1| tyrosine--tRNA ligase [Staphylococcus epidermidis VCU121]
          Length = 420

 Score =  494 bits (1272), Expect = e-137,   Method: Composition-based stats.
 Identities = 142/421 (33%), Positives = 224/421 (53%), Gaps = 20/421 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            +  L  RG I+Q ++   ++ L ++  VT Y G D TA SLH GHL   + L   Q+ G
Sbjct: 5   LIEDLKWRGLIYQQTDEAGIEELLNKEQVTLYCGADPTADSLHIGHLLPFLTLRRFQEHG 64

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+PI L+GGGT +IGDPS + E R +   ++++ N++ I        ++GT K  A+++N
Sbjct: 65  HRPIVLIGGGTGMIGDPSGKSEERVLQTEEQVEANVQGISNQMHKLFEFGTDKG-AVLVN 123

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N+ WL  I  I  LR+ G    VN ML  +S+++RL  E  +S+ EF Y ILQA DF  L
Sbjct: 124 NKDWLGQISLISFLRDYGKHVGVNYMLGKDSIQTRL--EHGISYTEFTYTILQAIDFGHL 181

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLG-ERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
            +  +C++Q+GGSDQWGNI  GI+L        + + LT PL+T + G K GK+ SGA+W
Sbjct: 182 NRELNCKIQVGGSDQWGNITSGIELMRRMYGQTEAYGLTIPLVTKSDGKKFGKSESGAVW 241

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIAT 304
           L+ + TSPY F+Q+W N  D DV+ F K  T L   EI+    +K +     EA+K +A 
Sbjct: 242 LDADKTSPYEFYQFWINQSDEDVIKFLKYFTFLSKEEINQLEQSKEEAPHKREAQKALAE 301

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLT 354
            +T  +HG +    A   +   F   + S          + +P + +SK        ++ 
Sbjct: 302 NVTRFIHGEDALNDAIRISQALFSGDLKSLSAKELKEGFKDVPQVELSK----NTTNIID 357

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +++ G  +S  +AR  + + AI IN     +   ++  +D        +  GKK + + 
Sbjct: 358 ALIETGIGSSKRQAREDVNNGAIYINGERQQDVNYELTDEDKIEGAFTIIRRGKKKYFMV 417

Query: 415 H 415
           +
Sbjct: 418 N 418


>gi|188994224|ref|YP_001928476.1| tyrosyl-tRNA synthetase [Porphyromonas gingivalis ATCC 33277]
 gi|254783624|sp|B2RHN4|SYY_PORG3 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|188593904|dbj|BAG32879.1| tyrosyl-tRNA synthetase [Porphyromonas gingivalis ATCC 33277]
          Length = 430

 Score =  494 bits (1272), Expect = e-137,   Method: Composition-based stats.
 Identities = 151/428 (35%), Positives = 229/428 (53%), Gaps = 22/428 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG IH I    E     ++G+ +AY+G D TA SLH GHL  +M+L   Q+ 
Sbjct: 2   NFVEELRWRGMIHDIMPGTE--EHLNKGMTSAYVGIDPTADSLHIGHLVGVMMLRHFQRA 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG-TGKTDALM 125
           GH+PI+L+GG T +IGDPS +   R ++    ++ N + IK   + F+ +       A +
Sbjct: 60  GHRPIALIGGATGMIGDPSMKSAERVLLDEATLRHNQDCIKQQLAKFLDFDSDAPNAAKL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQAYD 183
           +NN  W+    ++  +R+IG   +VN M++ +SV+ RL  E    LSF EF+Y +LQ YD
Sbjct: 120 VNNYDWMKDYSFLGFIRDIGKHITVNYMMAKDSVKKRLSAESSTGLSFTEFSYQLLQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           ++ L +N  CRLQMGGSDQWGNI  G +L  R    + FALT PL+T A G K GKT SG
Sbjct: 180 YLYLYRNEGCRLQMGGSDQWGNITTGTELIRRKDGGEAFALTCPLITKADGGKFGKTESG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA--KLQGKEINEAKKI 301
            IWL+   TSPY F+Q+W N+ DAD   + K  T L   EI  +A  + +   +   +K 
Sbjct: 240 NIWLDPARTSPYAFYQFWLNVSDADAEKYIKIFTGLNQDEIAELATRQAEAPHLRPLQKR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQ--------------HMPTISISKDEVS 347
           +A EIT MVH RE  + A  A+   F  S   Q               +P   + +  ++
Sbjct: 300 LAEEITVMVHSREAYDAAVEASEILFGKSTTEQLRKLDEATLLDVFAGVPQYHVERSRIA 359

Query: 348 RGMGLLTLIVKA-GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+ L+ L+  A     S  E R+ +K+  + +N   +++ +  +   D  S   +    
Sbjct: 360 TGISLVDLLADATDIFPSKGELRKTVKAGGVSLNKEKVADAEQTVGEDDLLSDRYLLAQK 419

Query: 407 GKKNHIIC 414
           GKK++ + 
Sbjct: 420 GKKSYYLI 427


>gi|308176932|ref|YP_003916338.1| tyrosine--tRNA ligase [Arthrobacter arilaitensis Re117]
 gi|307744395|emb|CBT75367.1| tyrosine--tRNA ligase [Arthrobacter arilaitensis Re117]
          Length = 441

 Score =  494 bits (1272), Expect = e-137,   Method: Composition-based stats.
 Identities = 142/420 (33%), Positives = 227/420 (54%), Gaps = 11/420 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L  RG +H  ++  EL+   S+  VT Y G+D TA SLH G+L QL+ +  LQ  
Sbjct: 23  NVWQELKWRGLVHVSTDEAELERALSEETVTYYCGFDPTAPSLHLGNLVQLLNMRRLQLA 82

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP++L+GG T +IGDP  +   R +   + + E + K++   S F+    G+    ++
Sbjct: 83  GHKPLALVGGSTGLIGDPR-QTAERTLNTKETVTEWVSKLQAQVSRFLS-NEGENAVQLV 140

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   +  +D LR++G +F V  M+  E V +RL  ++ +S+ EF+Y +LQ YDF+E
Sbjct: 141 NNLDWTQQLSALDFLRDVGKYFRVGTMVKKEIVAARLNSDEGISYTEFSYQVLQGYDFLE 200

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + Y C LQ GGSDQWGN+  G +L  +++   + A  +PL+T + GTK GK+   AIW
Sbjct: 201 LNRQYGCTLQTGGSDQWGNLTSGTELIRKVQGNSVHAYGTPLITNSDGTKFGKSEGNAIW 260

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIAT 304
           L+ EM SPY F+Q+W N  DADV+   K  T L   +I  +     +      A++ +A 
Sbjct: 261 LDAEMCSPYTFYQFWLNASDADVIDRLKVFTFLTRKQIAELETEVAERPFKRIAQRTLAW 320

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQ-HMPTISISKDEVS------RGMGLLTLIV 357
           E+T++VHG++  E+   A+   F     +   +PT+     E+         +G+L ++V
Sbjct: 321 EVTSLVHGQQATEQVIAASAAVFGNGDLAAIDLPTLESVIAELPTAKVEADNLGILNVLV 380

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            +G + S +EARR +      +NN  ++    ++   DF       L  GKKN  +  L 
Sbjct: 381 ASGLSKSLSEARRTVNEGGAYVNNEKVAGIDTELAEADFLHGRYAILRRGKKNMAVVELA 440


>gi|76786955|ref|YP_328889.1| tyrosyl-tRNA synthetase [Streptococcus agalactiae A909]
 gi|77410981|ref|ZP_00787337.1| tyrosyl-tRNA synthetase [Streptococcus agalactiae CJB111]
 gi|97202132|sp|Q3K3L4|SYY_STRA1 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|76562012|gb|ABA44596.1| tyrosyl-tRNA synthetase [Streptococcus agalactiae A909]
 gi|77163036|gb|EAO73991.1| tyrosyl-tRNA synthetase [Streptococcus agalactiae CJB111]
          Length = 419

 Score =  494 bits (1272), Expect = e-137,   Method: Composition-based stats.
 Identities = 149/419 (35%), Positives = 229/419 (54%), Gaps = 11/419 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L ERG + Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  
Sbjct: 2   NIFDELKERGLVFQTTDEDALRKALEEGFVSYYTGYDPTADSLHLGHLVAILTSRRLQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP +L+GG T +IGDPSF+D  R +   + +     KI+G  S+F+++ TG   A+++
Sbjct: 62  GHKPYALVGGATGLIGDPSFKDVERSLQTKETVVSWGNKIRGQLSNFLEFETGDNKAVLV 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W  +I +ID LR++G +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF E
Sbjct: 122 NNYDWFSNISFIDFLRDVGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFYE 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L KNY+  LQ+GGSDQWGN+  G +L  R        +T PL+T ++G K GK+   A+W
Sbjct: 180 LNKNYNVTLQIGGSDQWGNMTAGTELIRRKSNGVSHVMTVPLITDSTGKKFGKSEGNAVW 239

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIAT 304
           L+ + TSPY  +Q+W N+ DAD V F K  T L + EI+  R+   +      A+K +A 
Sbjct: 240 LDADKTSPYEMYQFWLNVMDADAVRFLKIFTFLSLKEIEDIRIQFEEAPHQRLAQKTLAR 299

Query: 305 EITTMVHGREEAEKAATAAMECFDMSI-------HSQHMPTISISKDEVSRGMGLLTLIV 357
           E+ T+VHG +  ++A     + F  +I         Q +  +     +    + ++ L+V
Sbjct: 300 EVVTLVHGEKAYKEAVNITEQLFAGNIKGLSVKELKQGLRGVPNYHVQTEDNLNIIDLLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            +G   S  +AR  + + AI IN   I + +  I   D        +  GKK + + + 
Sbjct: 360 TSGVVNSKRQAREDVSNGAIYINGDRIQDLEYTISENDKLENEITVIRRGKKKYFVLNF 418


>gi|157825880|ref|YP_001493600.1| tyrosyl-tRNA synthetase [Rickettsia akari str. Hartford]
 gi|189029762|sp|A8GNW7|SYY_RICAH RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|157799838|gb|ABV75092.1| tyrosyl-tRNA synthetase [Rickettsia akari str. Hartford]
          Length = 411

 Score =  494 bits (1272), Expect = e-137,   Method: Composition-based stats.
 Identities = 181/409 (44%), Positives = 276/409 (67%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           F+     +G+ HQ ++   L  +  +  + AYIG+D TA+SLH G L Q+M+L  LQ+ G
Sbjct: 3   FIEEFINKGYFHQCTDLDRLTTITKETKIAAYIGFDCTATSLHIGSLMQIMILRLLQRHG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKPI ++GGGTS IGDP+++DE+R+++  ++I +N + IK   S FIK+G GK+DA+M +
Sbjct: 63  HKPIVIIGGGTSKIGDPTWKDEARKILSKEDIAKNAKGIKKSLSKFIKFGDGKSDAIMFD 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL S+ Y++ LR+ G  FS+NRML+ +SV+ RL+REQ LSFLEFNYM+LQAYDF  L
Sbjct: 123 NVEWLDSLNYLEFLRDFGVHFSINRMLTMDSVKLRLEREQHLSFLEFNYMLLQAYDFYYL 182

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
           +K+Y+C LQ+GGSDQWGNI+ G DL  ++   ++F +T+PLLTT+SG KMGKT +GA+WL
Sbjct: 183 SKHYNCSLQLGGSDQWGNIVMGADLIRKISRKEVFGMTTPLLTTSSGAKMGKTAAGAVWL 242

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           N+++ SPY+++QYWRN +DADV+ FAK  + L   E++   +L  ++IN AKK +A E+T
Sbjct: 243 NEDLLSPYDYYQYWRNCEDADVIRFAKLYSELTSEELNEFERLAAEDINAAKKKLAYELT 302

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
            + H  + A+ A   A++ F+     + +PT+ + +  +  G+    L    G A+S +E
Sbjct: 303 KLCHSEQAAKSALETAVKIFEQGEIDESLPTVVLEQALLQTGISAYELFHDVGLASSKSE 362

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           AR+ ++    KIN+ ++ +E + I          IKLS GKK HI+  +
Sbjct: 363 ARKLIRGKGAKINDKLVEDENIIINTTFLLDKNAIKLSAGKKRHILVRV 411


>gi|72162442|ref|YP_290099.1| tyrosyl-tRNA synthetase [Thermobifida fusca YX]
 gi|71916174|gb|AAZ56076.1| tyrosyl-tRNA synthetase [Thermobifida fusca YX]
          Length = 447

 Score =  493 bits (1271), Expect = e-137,   Method: Composition-based stats.
 Identities = 153/427 (35%), Positives = 240/427 (56%), Gaps = 25/427 (5%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +D +  L  RG I Q ++  +L    + G VT Y G+D TA SLH GHLTQ + L   Q+
Sbjct: 17  TDIIDDLQWRGLIAQTTDLDDLRKALADGPVTLYCGFDPTAGSLHVGHLTQALTLARFQR 76

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY-----GTGK 120
            GH+PI+L+GG T +IGDP   +  R +   + I++ +  +K   SSF+++         
Sbjct: 77  AGHRPIALVGGATGMIGDPKP-NAERTLNSPETIRQWVGNLKRQLSSFLEFTPEGAEPKP 135

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           TDAL+L+N  WL  +  I LLR+IG  FS+N+ML+ E+V++RL+    +S+ EF+Y++LQ
Sbjct: 136 TDALLLDNAEWLGKLTAIGLLRDIGKHFSINQMLARETVKTRLE-GAGMSYTEFSYVLLQ 194

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT----PKLFALTSPLLTTASGTK 236
           +YD+VEL + + C LQ+GGSDQWGNI  G+DL  R++         ALT+ LLT A GTK
Sbjct: 195 SYDYVELYRRHGCTLQIGGSDQWGNITAGLDLIRRMEGNEPHGPAHALTTTLLTKADGTK 254

Query: 237 MGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKE 294
            GKT SGA+WL+ E+TSPY F+Q+W N DD D+  + +  +     EI+ + +  ++   
Sbjct: 255 FGKTESGAVWLDPELTSPYAFYQFWFNSDDRDIPRYLRIFSFRSREEIEELEQKTIERPA 314

Query: 295 INEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQ-----------HMPTISISK 343
              A++ +A E+TT+VHG +E      A+   F     +             +P + +S 
Sbjct: 315 ERAAQRALAEELTTLVHGEQECRNVIEASKALFGHGTLADLNPDTLGAALKEVPHVELS- 373

Query: 344 DEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
             V     L+ L    G   S + ARR ++     +NN+ +++ + ++   D      + 
Sbjct: 374 GTVRELPPLVDLFASTGLVPSKSAARRTIQEGGAYLNNAKVTDIEARVSEADLLHGRYLV 433

Query: 404 LSFGKKN 410
           L  GK+N
Sbjct: 434 LRRGKRN 440


>gi|253734487|ref|ZP_04868652.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           TCH130]
 gi|253727541|gb|EES96270.1| tyrosyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           TCH130]
          Length = 420

 Score =  493 bits (1271), Expect = e-137,   Method: Composition-based stats.
 Identities = 149/421 (35%), Positives = 228/421 (54%), Gaps = 20/421 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            +  L  RG I+Q ++ + ++ L ++  VT Y G D TA SLH GHL   + L   Q+ G
Sbjct: 5   LIEDLKWRGLIYQQTDEQGIEDLLNKEQVTLYCGADPTADSLHIGHLLPFLTLRRFQEHG 64

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+PI L+GGGT +IGDPS + E R +   +++ +NIE I     +  ++GT    A+++N
Sbjct: 65  HRPIVLIGGGTGMIGDPSGKSEERVLQTEEQVDKNIEGISKQMHNIFEFGTDHG-AVLVN 123

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  I  I  LR+ G    VN ML  +S++SRL  E  +S+ EF Y ILQA DF  L
Sbjct: 124 NRDWLGQISLISFLRDYGKHVGVNYMLGKDSIQSRL--EHGISYTEFTYTILQAIDFGHL 181

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLG-ERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
            +  +C++Q+GGSDQWGNI  GI+L          + LT PL+T + G K GK+ SGA+W
Sbjct: 182 NRELNCKIQVGGSDQWGNITSGIELMRRMYGQTDAYGLTIPLVTKSDGKKFGKSESGAVW 241

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA--KLQGKEINEAKKIIAT 304
           L+ E TSPY F+Q+W N  D DV+ F K  T L   EIDR+   K +   + EA+K +A 
Sbjct: 242 LDAEKTSPYEFYQFWINQSDEDVIKFLKYFTFLGKEEIDRLEQSKNEAPHLREAQKTLAE 301

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLT 354
           E+T  +HG +    A   +   F   + S          + +P +++S D       ++ 
Sbjct: 302 EVTKFIHGEDALNDAIRISQALFSGDLKSLSAKELKDGFKDVPQVTLSNDT----TNIVE 357

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           ++++ G +TS  +AR  + + AI IN     +    +  +D        +  GKK + + 
Sbjct: 358 VLIETGISTSKRQAREDVNNGAIYINGERQQDVNYALAPEDKIDGEFTIIRRGKKKYFMV 417

Query: 415 H 415
           +
Sbjct: 418 N 418


>gi|157150873|ref|YP_001451195.1| tyrosyl-tRNA synthetase [Streptococcus gordonii str. Challis
           substr. CH1]
 gi|189029777|sp|A8AZI5|SYY_STRGC RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|157075667|gb|ABV10350.1| tyrosyl-tRNA synthetase [Streptococcus gordonii str. Challis
           substr. CH1]
          Length = 418

 Score =  493 bits (1271), Expect = e-137,   Method: Composition-based stats.
 Identities = 146/416 (35%), Positives = 223/416 (53%), Gaps = 11/416 (2%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L ERG I Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  G
Sbjct: 3   IFDELKERGLIFQTTDEEALRQELEEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKP +L+GG T +IGDPSF+D  R +   + ++  ++ I+G  +  + +  G+  A M+N
Sbjct: 63  HKPYALVGGATGLIGDPSFKDAERSLQTKETVEGWVKSIQGQLAGLLDFENGQNKAEMVN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W   I +ID LR++G +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF  L
Sbjct: 123 NYDWFSDISFIDFLRDVGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFFIL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            + +   LQ+GGSDQWGN+  G +L  R        +T PL+T ASG K GK+   A+WL
Sbjct: 181 NQKHGVTLQIGGSDQWGNMTAGTELLRRKADKTGHVITVPLITDASGKKFGKSEGNAVWL 240

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATE 305
           N + TSPY  +Q+W N+ D D V F K  T L + EI+ + K      +E  A+KI+A E
Sbjct: 241 NADKTSPYEMYQFWMNVMDDDAVRFLKIFTFLSLDEIEEIRKQFEAAPHERLAQKILARE 300

Query: 306 ITTMVHGREEAEKAATAAMECFDMSI-------HSQHMPTISISKDEVSRGMGLLTLIVK 358
           + T+VHG +  ++A     + F  +I         Q +  +   + +    + ++ L+V 
Sbjct: 301 VVTLVHGEKAYQEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVQAEDNLNIVDLLVT 360

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           AG   S  +AR  +++ AI +N   I +    +   D        +  GKK + + 
Sbjct: 361 AGVVNSKRQAREDVQNGAIYVNGDRIQDLDYTLSDADKLENELTVIRRGKKKYFVL 416


>gi|77406343|ref|ZP_00783406.1| tyrosyl-tRNA synthetase [Streptococcus agalactiae H36B]
 gi|77175048|gb|EAO77854.1| tyrosyl-tRNA synthetase [Streptococcus agalactiae H36B]
          Length = 419

 Score =  493 bits (1271), Expect = e-137,   Method: Composition-based stats.
 Identities = 149/419 (35%), Positives = 229/419 (54%), Gaps = 11/419 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L ERG + Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  
Sbjct: 2   NIFDELKERGLVFQTTDEDALRKALEEGFVSYYTGYDPTADSLHLGHLVAILTSRRLQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP +L+GG T +IGDPSF+D  R +   + +     KI+G  S+F+++ TG   A+++
Sbjct: 62  GHKPYALVGGATGLIGDPSFKDVERSLQTKETVVSWGNKIRGQLSNFLEFETGDNKAVLV 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W  +I +ID LR++G +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF E
Sbjct: 122 NNYDWFSNISFIDFLRDVGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFYE 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L KNY+  LQ+GGSDQWGN+  G +L  R        +T PL+T ++G K GK+   A+W
Sbjct: 180 LNKNYNVTLQIGGSDQWGNMTAGTELIRRKSNGVSHVMTVPLITDSTGKKFGKSEGNAVW 239

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIAT 304
           L+ + TSPY  +Q+W N+ DAD V F K  T L + EI+  R+   +      A+K +A 
Sbjct: 240 LDADKTSPYEMYQFWLNVMDADAVRFLKIFTFLSLKEIEDIRIQFEEAPHQRLAQKTLAR 299

Query: 305 EITTMVHGREEAEKAATAAMECFDMSI-------HSQHMPTISISKDEVSRGMGLLTLIV 357
           E+ T+VHG +  ++A     + F  +I         Q +  +     +    + ++ L+V
Sbjct: 300 EVVTLVHGEKAYKEAVNITEQLFAGNIKGLSVKELKQGLRGVPNYHVQTEDNLNIIDLLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            +G   S  +AR  + + AI IN   I + +  I   D        +  GKK + + + 
Sbjct: 360 TSGVVNSKRQAREDVSNGAIYINGDRIQDLEYTISXNDKLENEITVIRRGKKKYFVLNF 418


>gi|90577965|ref|ZP_01233776.1| tyrosyl-tRNA synthetase [Vibrio angustum S14]
 gi|90441051|gb|EAS66231.1| tyrosyl-tRNA synthetase [Vibrio angustum S14]
          Length = 430

 Score =  493 bits (1271), Expect = e-137,   Method: Composition-based stats.
 Identities = 152/417 (36%), Positives = 227/417 (54%), Gaps = 9/417 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L +RG I QI++   L    ++G +T Y G+D TA SLH GHL  L+ L   Q+ 
Sbjct: 11  NLIQELKDRGLIAQITDEEALSERLAKGPITLYCGFDPTADSLHLGHLVPLLCLKRFQEA 70

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P++L+GG T +IGDPSF+   R +     +   + KI+   S F+ +      A M+
Sbjct: 71  GHNPVALVGGATGMIGDPSFKATERSLNTLDTVAGWVAKIQRQVSPFLDFDNATNPARMV 130

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYDFV 185
           NN  W  ++  +  LR+IG  FSVN+M+S ESV+ R+ R++  +SF EF Y +LQ+YDF 
Sbjct: 131 NNHDWFGNMDVLTFLRDIGKHFSVNQMISKESVKQRINRDEVGISFTEFAYSLLQSYDFA 190

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            + K     LQ+GGSDQWGNI  GIDL  R+   ++F +T PL+T + GTK GKT  GA+
Sbjct: 191 SMNKEMGMELQIGGSDQWGNITAGIDLTRRMNQQQVFGMTVPLITKSDGTKFGKTEGGAV 250

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLP--MSEIDRMAKLQGKEINEAKKIIA 303
           WL+   TSPY F+Q+W N  DADV  F +  T L     +    A     +  EA++I+A
Sbjct: 251 WLDPSKTSPYKFYQFWMNTADADVYRFLRFFTFLSEEEIQQIEEADRNSGKAPEAQRILA 310

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSI------HSQHMPTISISKDEVSRGMGLLTLIV 357
            + T +VHG+E+ E A       F+  +          +    +   E   G  L  ++V
Sbjct: 311 EQTTRLVHGQEQLEAAQNITRCLFENDLAHLSESDFAQLAQDGMPSAEAENGDDLQQVLV 370

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           K+G A+S  +A+ H+ SNAI +N   +S    +    D        +  GKKN+ + 
Sbjct: 371 KSGLASSRGQAKTHISSNAIMVNGEKVSEPFYEFTDADKLFGRYTLIRRGKKNYSLI 427


>gi|311746911|ref|ZP_07720696.1| tyrosine--tRNA ligase [Algoriphagus sp. PR1]
 gi|126578600|gb|EAZ82764.1| tyrosine--tRNA ligase [Algoriphagus sp. PR1]
          Length = 430

 Score =  493 bits (1271), Expect = e-137,   Method: Composition-based stats.
 Identities = 148/431 (34%), Positives = 230/431 (53%), Gaps = 23/431 (5%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           + F+  L  RG +  ++    L+   S+GV +AY+G+D TA SLH GHL  +M L   Q+
Sbjct: 2   NSFIEELRWRGMLQDMTPE--LEEHLSKGVASAYLGFDPTADSLHIGHLVGVMTLLHFQR 59

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY-GTGKTDAL 124
            GHKP +L+GG T +IGDPSF+   R ++  + +  N+  I+   S F+ + G     A 
Sbjct: 60  AGHKPFALVGGATGMIGDPSFKSAERNLLNKETLDHNVSCIQNQLSKFLDFSGETNNKAE 119

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           ++NN  W+    +++ +R++G   +VN M++ +SV+ RL+    LSF EF+Y ++Q YDF
Sbjct: 120 LVNNYDWMSEFSFLEFIRDVGKHITVNYMMAKDSVKRRLEDGNGLSFTEFSYQLIQGYDF 179

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L KN +C +Q+GGSDQWGNI+ G +L  R+     FALT PL+T A G+K GKT  G+
Sbjct: 180 YHLWKNENCTIQLGGSDQWGNIVTGTELIRRMGGGSAFALTVPLITKADGSKFGKTEGGS 239

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKII 302
           +WL+ E TSPY F+Q+W N+ D D   + +  TTL    I+    A  +       +K I
Sbjct: 240 VWLDPEKTSPYAFYQFWLNVSDEDASKYIRIFTTLDQQTIESLEAAHAEAPHQRALQKEI 299

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDEVSR 348
           A  +T MVHG+EE + A  A+   F  S                   +P + +SKDE + 
Sbjct: 300 AKNVTVMVHGQEELDMAIKASEILFGKSSTEDLASLDERTFLQVFDGVPQVQLSKDEFAG 359

Query: 349 GMGLLTLIVKAG---FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLS 405
               L L  +A       S  EAR+ ++   + IN   +++    +          + + 
Sbjct: 360 FESTLDLFGEATQGVIFKSKGEARKMIQGGGVSINKEKLTDPNAALSCS-LLQGKYLLIQ 418

Query: 406 FGKKNHIICHL 416
            GKKN+ I  +
Sbjct: 419 RGKKNYYIVEI 429


>gi|30022732|ref|NP_834363.1| tyrosyl-tRNA synthetase [Bacillus cereus ATCC 14579]
 gi|81433417|sp|Q817A2|SYY1_BACCR RecName: Full=Tyrosyl-tRNA synthetase 1; AltName:
           Full=Tyrosine--tRNA ligase 1; Short=TyrRS 1
 gi|29898291|gb|AAP11564.1| Tyrosyl-tRNA synthetase [Bacillus cereus ATCC 14579]
          Length = 418

 Score =  493 bits (1271), Expect = e-137,   Method: Composition-based stats.
 Identities = 153/418 (36%), Positives = 225/418 (53%), Gaps = 11/418 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
             L  L  RG I+Q ++    + L  +  V  Y G+D TA SLH GH+  +++L   Q  
Sbjct: 2   GILQDLEFRGLINQQTDDEGFEQLLEKESVKLYCGFDPTADSLHIGHMYPVLMLRRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI+L+GGGT +IGDPS +   R +     +    E IK   S+F+++      A M 
Sbjct: 62  GHQPIALVGGGTGMIGDPSGKKAERTLNTKDTVAYYTESIKNQLSNFLEFENVDNPATMA 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL ++  I  LR+IG  F +N ML+ ++V SRL  E  +SF EF+YMILQ+YDF+ 
Sbjct: 122 NNYDWLGNLDVISFLRDIGKNFGLNYMLAKDTVASRL--ETGISFTEFSYMILQSYDFLN 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGER-LKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           L +++ CRLQ+GGSDQWGNI  G++L  +  +  K F LT PL+T + GTK GKT  GAI
Sbjct: 180 LYQHHKCRLQIGGSDQWGNITAGLELIRKSEEDAKAFGLTIPLVTKSDGTKFGKTEGGAI 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIA 303
           WL+ E T+PY F+Q+W N DD DVV + K  T L   EI  + K   +  E   A+K + 
Sbjct: 240 WLDPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLSHEEILELEKQVAEAPEKRAAQKALG 299

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRGMGLLTLIV 357
           +E+T +VHG E  E+A   +   F  S+       I        S +  +    L+ L+V
Sbjct: 300 SEMTKLVHGEEALEQAIKISAALFSGSVAELTASEIEQGFKDVPSVERTAEDTVLIDLLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           ++  + S  +AR  + + AI +N          +   D        +  GKK + +  
Sbjct: 360 ESKISPSKRQAREDVTNGAIYVNGERTQALDYVVTENDRIEGKFTIIRRGKKKYFLIR 417


>gi|220912279|ref|YP_002487588.1| tyrosyl-tRNA synthetase [Arthrobacter chlorophenolicus A6]
 gi|219859157|gb|ACL39499.1| tyrosyl-tRNA synthetase [Arthrobacter chlorophenolicus A6]
          Length = 437

 Score =  493 bits (1271), Expect = e-137,   Method: Composition-based stats.
 Identities = 147/428 (34%), Positives = 227/428 (53%), Gaps = 20/428 (4%)

Query: 2   PAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
           P F ++    L  RG +H  ++  EL+ L + G VT Y G+D TA SLH G+L QL+++ 
Sbjct: 14  PTF-ANVWQELKWRGLVHVSTDEAELEKLLAGGPVTYYCGFDPTAPSLHLGNLVQLLVMR 72

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKT 121
            LQ  GHKP+ L+GG T +IGDP      R +     + E +  ++     F+ +  G  
Sbjct: 73  RLQLAGHKPLGLVGGSTGMIGDPRP-TAERTLNTKDTVAEWVGYLQAQVRRFLSF-EGDN 130

Query: 122 DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA 181
            A M+NN  W   +  ID LRE+G  F V  ML  ++V SRL  ++ +S+ EF+Y ILQ 
Sbjct: 131 AARMVNNLDWTAPLSAIDFLREVGKHFRVGTMLRKDAVASRLSSDEGISYTEFSYQILQG 190

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            D+++L ++Y C LQ GGSDQWGN+  G +L  +++   + AL +PL+T + GTK GK+ 
Sbjct: 191 MDYLQLYRDYACMLQTGGSDQWGNLTSGTELIRKVEGKSVHALGTPLITNSDGTKFGKSE 250

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAK 299
             AIWL+  M S Y F+Q+W N  DADVV   K  T L  +EI+ +A    +     E +
Sbjct: 251 GNAIWLDAGMCSAYAFYQFWLNTADADVVDRLKVFTFLTRAEIEDIATSVAERPFAREGQ 310

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMS-----------IHSQHMPTISISKDEVSR 348
           + +A E+T++VHG E  EK   A+   F                +  +PT ++  D +  
Sbjct: 311 RKLAFEVTSLVHGVEATEKVIAASAALFGNGDLGALDKQTLQAATSELPTATVQVDAL-- 368

Query: 349 GMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGK 408
             G++ L+V +G + S + ARR +      +NN  + + +  I   +      + L  GK
Sbjct: 369 --GIVDLLVASGLSESKSAARRTVGEGGAYVNNEKVLDPETVIAESELLHGQYLLLRRGK 426

Query: 409 KNHIICHL 416
           KN     +
Sbjct: 427 KNLATVEV 434


>gi|296102665|ref|YP_003612811.1| tyrosyl-tRNA synthetase [Enterobacter cloacae subsp. cloacae ATCC
           13047]
 gi|295057124|gb|ADF61862.1| tyrosyl-tRNA synthetase [Enterobacter cloacae subsp. cloacae ATCC
           13047]
          Length = 409

 Score =  493 bits (1271), Expect = e-137,   Method: Composition-based stats.
 Identities = 153/406 (37%), Positives = 224/406 (55%), Gaps = 11/406 (2%)

Query: 19  HQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGT 78
            Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q  GHKP++L+GG T
Sbjct: 2   AQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQMAGHKPVALVGGAT 61

Query: 79  SIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYI 138
            +IGDPSF+   R++     +QE ++KI+   + F+ +  G   A+  NN  W  S+  +
Sbjct: 62  GLIGDPSFKAAERKLNTEDTVQEWVDKIRKQVAPFLDFNCGDNAAIAANNYDWFGSMNVL 121

Query: 139 DLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDFVELAKNYDCRLQM 197
             LR+IG  FSVN+M++ E+V+ RL R +Q +SF EF+Y +LQ YDF  L K +   LQ+
Sbjct: 122 TFLRDIGKHFSVNQMINKEAVKQRLNRDDQGISFTEFSYNLLQGYDFACLNKLHGVCLQI 181

Query: 198 GGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNF 257
           GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA+WL+ + TSPY F
Sbjct: 182 GGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGAVWLDPKKTSPYKF 241

Query: 258 WQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKIIATEITTMVHGRE 314
           +Q+W N  DADV  F K  T + +  I   +   K  GK    A+ ++A E+T +VHG E
Sbjct: 242 YQFWINTADADVYRFLKFFTFMDIETINALEEEDKNSGKAPR-AQYVLADEVTKLVHGEE 300

Query: 315 EAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
               A       F+ ++        + +    +   E+ +G  L+  +V +    S  +A
Sbjct: 301 GLAAAKRITASLFNGTLSDLSEADFEQLAQDGVPMVEMEKGADLMQALVDSELQPSRGQA 360

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           R+ + SNAI IN    ++ +      D        L  GKKN+ + 
Sbjct: 361 RKTIASNAITINGEKQADPEYTFADSDRLYGRYTLLRRGKKNYCLV 406


>gi|150003760|ref|YP_001298504.1| putative tyrosyl-tRNA synthetase 1 [Bacteroides vulgatus ATCC 8482]
 gi|254881011|ref|ZP_05253721.1| tyrosyl-tRNA ligase [Bacteroides sp. 4_3_47FAA]
 gi|294777421|ref|ZP_06742872.1| tyrosine--tRNA ligase [Bacteroides vulgatus PC510]
 gi|319640018|ref|ZP_07994745.1| tyrosyl-tRNA synthetase [Bacteroides sp. 3_1_40A]
 gi|189083643|sp|A6KZL8|SYY_BACV8 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|149932184|gb|ABR38882.1| putative tyrosyl-tRNA synthetase 1 [Bacteroides vulgatus ATCC 8482]
 gi|254833804|gb|EET14113.1| tyrosyl-tRNA ligase [Bacteroides sp. 4_3_47FAA]
 gi|294448489|gb|EFG17038.1| tyrosine--tRNA ligase [Bacteroides vulgatus PC510]
 gi|317388296|gb|EFV69148.1| tyrosyl-tRNA synthetase [Bacteroides sp. 3_1_40A]
          Length = 430

 Score =  493 bits (1270), Expect = e-137,   Method: Composition-based stats.
 Identities = 147/428 (34%), Positives = 226/428 (52%), Gaps = 22/428 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L+ RG +H +    E   L ++  VTAY+G D TA SLH GHL  +M+L   Q+ 
Sbjct: 2   NFVEELTWRGMVHTMMPGTE--ELLAKEQVTAYLGIDPTADSLHIGHLCGVMMLRHFQRC 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG-TGKTDALM 125
           GHKP++L+GG T +IGDPS + + R ++  + ++ N+  IK   + F+ +       A +
Sbjct: 60  GHKPLALVGGATGMIGDPSGKSQERNLLTEETLRHNVACIKKQLAKFLDFESDAPNKAEL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQAYD 183
           +NN  W+    ++D  RE+G   +VN M++ +SV+ RL  E    LSF EF Y +LQ YD
Sbjct: 120 VNNYDWMKDFTFLDFAREVGKHITVNYMMAKDSVQKRLNGEARDGLSFTEFTYQLLQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ L +   C+LQMGGSDQWGNI  G +L  R    ++FALT PL+T A G K GKT SG
Sbjct: 180 FLHLYETKGCKLQMGGSDQWGNITTGAELIRRTNGGEVFALTCPLITKADGGKFGKTESG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKI 301
            IWL+   TSPY F+Q+W N+ D D   + K  T+L   E++       +   +   +K 
Sbjct: 240 NIWLDPRYTSPYKFYQFWLNVSDEDAARYIKIFTSLSQEEVEALTAEHAEAPHLRVLQKR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDEVS 347
           +A E+T MVH  E+   A  A+   F  +                 + +P   +S+D ++
Sbjct: 300 LAKEVTVMVHSEEDYNAAVEASGILFGNATSEALKKLDEDTLLAVFEGVPQFEVSRDALA 359

Query: 348 RGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+  + L V  A    S  E R+ ++   + +N   +S     I   D      + +  
Sbjct: 360 EGVKAVDLFVDNAAVFASKGEMRKLVQGGGVSLNKEKLSAFDQVITTADLLDEKYLLVQR 419

Query: 407 GKKNHIIC 414
           GKKN+ + 
Sbjct: 420 GKKNYYLV 427


>gi|42784257|ref|NP_981504.1| tyrosyl-tRNA synthetase [Bacillus cereus ATCC 10987]
 gi|81408561|sp|Q72Y10|SYY2_BACC1 RecName: Full=Tyrosyl-tRNA synthetase 2; AltName:
           Full=Tyrosine--tRNA ligase 2; Short=TyrRS 2
 gi|42740188|gb|AAS44112.1| tyrosyl-tRNA synthetase [Bacillus cereus ATCC 10987]
          Length = 419

 Score =  493 bits (1270), Expect = e-137,   Method: Composition-based stats.
 Identities = 149/424 (35%), Positives = 220/424 (51%), Gaps = 21/424 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG I+Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  
Sbjct: 2   NIIDELEWRGAINQQTDEEGLRKLVEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P+ L+GG T  IGDPS R   R++   + +Q N++ +         +G G ++  M+
Sbjct: 62  GHHPVILIGGATGTIGDPSGRQSERQLQTLEVVQHNVDALTAQMKKLFDFG-GNSEVKMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I  I+ LR+ G  FS+N ML+ + V SRL  +  +SF EF Y ILQA DF  
Sbjct: 121 NNYDWTHEINIIEFLRDYGKNFSINSMLAKDIVASRL--DTGISFTEFTYQILQAMDFHH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKLFALTSPLLTTASGTKMGKTLSGA 244
           L    D +LQ+GGSDQWGNI  G+DL  +L+    K+F LT PLL  + GTK GK+  GA
Sbjct: 179 LYTKEDVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSAGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA--KLQGKEINEAKKII 302
           +WL+ E T+P+ F+Q+W N DD DVV + K  T L    ID +A          EA+K++
Sbjct: 239 VWLDPEKTTPFEFYQFWVNTDDRDVVKYLKYFTFLTKERIDELAVKVETEPHKREAQKVL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGL 352
           A E+T  VHG E   +A       F   I S          + MPT   SK+       +
Sbjct: 299 AEEMTKFVHGEEALLQAVKITEALFSGDIKSLTADEIEQGFKEMPTFQSSKET----KNI 354

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           +  +V  G   S  +AR  + + AI +N   +++    + +++      I +  GKKN+ 
Sbjct: 355 VEWLVDLGIEPSRRQAREDINNGAISMNGEKVTDVGTDVTVENSFDGRFIIIRKGKKNYS 414

Query: 413 ICHL 416
           +  L
Sbjct: 415 LVKL 418


>gi|288957327|ref|YP_003447668.1| tyrosyl-tRNA synthetase [Azospirillum sp. B510]
 gi|288909635|dbj|BAI71124.1| tyrosyl-tRNA synthetase [Azospirillum sp. B510]
          Length = 420

 Score =  493 bits (1270), Expect = e-137,   Method: Composition-based stats.
 Identities = 204/417 (48%), Positives = 280/417 (67%), Gaps = 13/417 (3%)

Query: 6   SDFLSILSERGFIHQISNPR----ELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
           +DFL IL ERGF+HQ S+P      L      GV+TAY+G+D TASSLH GHL  +M L 
Sbjct: 13  ADFLRILRERGFLHQCSDPADDLSGLAAAAPGGVLTAYVGFDATASSLHVGHLLSIMALR 72

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKT 121
           WLQ+TG++PI L+GGGT+ IGDPSFRD +R M+   +I  N   ++G+F  ++ +G G  
Sbjct: 73  WLQRTGNRPIVLIGGGTTRIGDPSFRDTTRPMLDDAQIAANAAGLRGVFGQYMSFGDGPA 132

Query: 122 DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA 181
           DA+M++N  WL  + Y+  LR+IG  F++NRMLSFESVR R++REQ L+FLEFNYMILQA
Sbjct: 133 DAMMVDNADWLDGLDYVPFLRDIGRHFTINRMLSFESVRQRMEREQPLTFLEFNYMILQA 192

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
           YDF+EL++ + C LQMGGSDQWGNI+ GI+L  R++  +LF LT+PLLTTASGTKMGKT 
Sbjct: 193 YDFLELSRRHGCLLQMGGSDQWGNIVNGIELARRVERRELFGLTTPLLTTASGTKMGKTA 252

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKI 301
            GA+WLN +   P++FWQ+WRN +DADV  F +  T LP+ EI R+ +L+G EINEAK I
Sbjct: 253 GGAVWLNADALRPFDFWQFWRNTEDADVGRFLRLFTELPLDEIARLERLEGAEINEAKII 312

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGF 361
           +ATE T + HG  EAEKAA AA   F        +P I++ ++  + G+ L+  +V AG 
Sbjct: 313 LATEATRLCHGSAEAEKAAAAAGSPFAPGG--DGLPEITLRREAGADGVPLVDALVAAGL 370

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLCG 418
           + S   ARR ++    +++   +S+E   +            LS G+K H+   + G
Sbjct: 371 SASKGAARRLIREGGARLDGQPVSDEAATLTAP-------AVLSAGRKRHVRLIVAG 420


>gi|284801990|ref|YP_003413855.1| tyrosyl-tRNA synthetase [Listeria monocytogenes 08-5578]
 gi|284995132|ref|YP_003416900.1| tyrosyl-tRNA synthetase [Listeria monocytogenes 08-5923]
 gi|284057552|gb|ADB68493.1| tyrosyl-tRNA synthetase [Listeria monocytogenes 08-5578]
 gi|284060599|gb|ADB71538.1| tyrosyl-tRNA synthetase [Listeria monocytogenes 08-5923]
          Length = 429

 Score =  493 bits (1270), Expect = e-137,   Method: Composition-based stats.
 Identities = 155/425 (36%), Positives = 219/425 (51%), Gaps = 21/425 (4%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
            K + +  L  RG I+Q ++   L     +  ++ Y G D +  S+H GHL   M+L   
Sbjct: 9   MKMNIIDELEWRGAIYQQTDEEGLRKWVEEKQISLYCGIDPSGDSMHIGHLIPFMILRRF 68

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q  GH+PI L+GG T  IGDPS + E R++   ++I +N+E ++        +  G + A
Sbjct: 69  QNAGHRPIILVGGATGTIGDPSGKKEERKLQSMEQISKNVESLRVQLGKIFDF-EGNSAA 127

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            M+NN  W   +  +D LR+ G  F+VN MLS + V SRL  E  +SF EF Y ILQA D
Sbjct: 128 SMVNNYDWTKDVSILDFLRDYGKEFNVNTMLSKDIVASRL--EVGISFTEFAYQILQAMD 185

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTL 241
           F  L +  DCRLQ+GGSDQWGNI  G+DL  + +    K F LT PLLT A GTK GK+ 
Sbjct: 186 FNHLYEFNDCRLQIGGSDQWGNITAGLDLIRKKQGENAKAFGLTIPLLTKADGTKFGKSE 245

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAK 299
            GAIWLN E T+PY F+Q+W N DD DVV + K  T L  +EID +AK       +  A+
Sbjct: 246 GGAIWLNPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLTEAEIDELAKQVETEPHLRAAQ 305

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRG 349
           K +A E+T  VH  E  E+A   +   F   + +          + +PT      E    
Sbjct: 306 KTLAAEMTKFVHSEEALEQALKISKALFSGDVKALTADEIEQGFKDVPTFVAEDSE---- 361

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
             L+  +V  G   S  +AR  + + AI IN     + +  +   D        +  GKK
Sbjct: 362 ANLVDWLVTLGIEPSKRQAREDVGNGAIYINGERQQDLEKIMDASDRIENKFTIVRRGKK 421

Query: 410 NHIIC 414
            + + 
Sbjct: 422 KYFLV 426


>gi|97202276|sp|Q47N93|SYY_THEFY RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
          Length = 432

 Score =  493 bits (1270), Expect = e-137,   Method: Composition-based stats.
 Identities = 153/427 (35%), Positives = 240/427 (56%), Gaps = 25/427 (5%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +D +  L  RG I Q ++  +L    + G VT Y G+D TA SLH GHLTQ + L   Q+
Sbjct: 2   TDIIDDLQWRGLIAQTTDLDDLRKALADGPVTLYCGFDPTAGSLHVGHLTQALTLARFQR 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY-----GTGK 120
            GH+PI+L+GG T +IGDP   +  R +   + I++ +  +K   SSF+++         
Sbjct: 62  AGHRPIALVGGATGMIGDPKP-NAERTLNSPETIRQWVGNLKRQLSSFLEFTPEGAEPKP 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           TDAL+L+N  WL  +  I LLR+IG  FS+N+ML+ E+V++RL+    +S+ EF+Y++LQ
Sbjct: 121 TDALLLDNAEWLGKLTAIGLLRDIGKHFSINQMLARETVKTRLE-GAGMSYTEFSYVLLQ 179

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT----PKLFALTSPLLTTASGTK 236
           +YD+VEL + + C LQ+GGSDQWGNI  G+DL  R++         ALT+ LLT A GTK
Sbjct: 180 SYDYVELYRRHGCTLQIGGSDQWGNITAGLDLIRRMEGNEPHGPAHALTTTLLTKADGTK 239

Query: 237 MGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKE 294
            GKT SGA+WL+ E+TSPY F+Q+W N DD D+  + +  +     EI+ + +  ++   
Sbjct: 240 FGKTESGAVWLDPELTSPYAFYQFWFNSDDRDIPRYLRIFSFRSREEIEELEQKTIERPA 299

Query: 295 INEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQ-----------HMPTISISK 343
              A++ +A E+TT+VHG +E      A+   F     +             +P + +S 
Sbjct: 300 ERAAQRALAEELTTLVHGEQECRNVIEASKALFGHGTLADLNPDTLGAALKEVPHVELS- 358

Query: 344 DEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
             V     L+ L    G   S + ARR ++     +NN+ +++ + ++   D      + 
Sbjct: 359 GTVRELPPLVDLFASTGLVPSKSAARRTIQEGGAYLNNAKVTDIEARVSEADLLHGRYLV 418

Query: 404 LSFGKKN 410
           L  GK+N
Sbjct: 419 LRRGKRN 425


>gi|225390680|ref|ZP_03760404.1| hypothetical protein CLOSTASPAR_04435 [Clostridium asparagiforme
           DSM 15981]
 gi|225043298|gb|EEG53544.1| hypothetical protein CLOSTASPAR_04435 [Clostridium asparagiforme
           DSM 15981]
          Length = 408

 Score =  493 bits (1270), Expect = e-137,   Method: Composition-based stats.
 Identities = 166/401 (41%), Positives = 245/401 (61%), Gaps = 6/401 (1%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG I Q++N  E+  + ++G    YIG+D TA SLH GH   L L+  LQ  G
Sbjct: 3   IYEELVARGLIAQVTNEEEIKKMVNEGKAVFYIGFDPTADSLHVGHFMALCLMKRLQMAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           ++PI+L+GGGT +IGDPS R + R MM  + IQ N +  K   S FI +  GK  A+M+N
Sbjct: 63  NRPIALIGGGTGMIGDPSGRSDMRTMMTPEIIQHNCDCFKKQMSRFIDFSEGK--AMMVN 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  + YI+ LRE+G  FSVN ML  E  + R+  E+ LSFLEFNYMI+Q+YDF EL
Sbjct: 121 NAEWLLGLNYIEFLREVGPHFSVNNMLRAECYKQRM--EKGLSFLEFNYMIMQSYDFYEL 178

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            + Y C +Q GG DQW N++ G +L  R       A+T  LL  + G KMGKT SGA+WL
Sbjct: 179 FQRYGCNMQFGGDDQWSNMLGGTELIRRKLGKDAHAMTITLLLNSEGKKMGKTQSGAVWL 238

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           + E T+P++F+QYWRN+ DADV+   + LT LP+ +ID M + +G ++N AK+I+A E+T
Sbjct: 239 DPEKTTPFDFYQYWRNVADADVLKCLRMLTFLPIEQIDEMDQWEGSQLNTAKEILAYELT 298

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTN 366
            +VHG EEA+KA   A   F     +++MP   ++ ++   G + +L+++ K+G + S +
Sbjct: 299 KLVHGEEEADKAQEGARALFSAGGSTENMPICELADEDFKDGSIDILSVLHKSGLSASRS 358

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFG 407
           EARR+++   + ++   + + K       F+  G +    G
Sbjct: 359 EARRNVEQGGVSVDGEAVKDVKAVYARSQFEGEG-MVFKRG 398


>gi|299822730|ref|ZP_07054616.1| tyrosine--tRNA ligase [Listeria grayi DSM 20601]
 gi|299816259|gb|EFI83497.1| tyrosine--tRNA ligase [Listeria grayi DSM 20601]
          Length = 473

 Score =  493 bits (1270), Expect = e-137,   Method: Composition-based stats.
 Identities = 157/425 (36%), Positives = 232/425 (54%), Gaps = 21/425 (4%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           K + +  L  RG ++Q ++   L  L  +  +  Y G D +  S+H GHL   M+L   Q
Sbjct: 55  KMNIIEELKWRGAVYQQTDEEGLKELVEKESIALYCGIDPSGDSMHIGHLIPFMILRRFQ 114

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           K GH PI L+GG T  IGDPS + E R++   ++IQ+N+E ++       ++  G   A 
Sbjct: 115 KAGHTPIVLVGGATGTIGDPSGKKEERQLQSIEQIQKNVEGLRSQLGQIFEF-EGAHAAK 173

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M+NN  W   +  +D LR+ G  F+VN MLS + V SRL+    +SF EF+Y ILQA DF
Sbjct: 174 MVNNYDWTKELSILDFLRDFGKEFNVNIMLSKDVVASRLQN--GISFTEFSYQILQAMDF 231

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKLFALTSPLLTTASGTKMGKTLS 242
           + L ++ DCRLQ+GGSDQWGNI  G+DL  + +    K F LT PLLT A GTK GKT  
Sbjct: 232 LHLYQHEDCRLQIGGSDQWGNITAGLDLIRKKEGDKAKAFGLTIPLLTKADGTKFGKTEG 291

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKK 300
           GAIW+N+E T+PY F+Q+W N DD DVV + K  T L   EI  + +  ++   + EA+K
Sbjct: 292 GAIWINREKTTPYEFYQFWINTDDRDVVKYLKYFTFLSQEEIAELEQKMIEAPHLREAQK 351

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGM 350
            +A EITT VH  E+  +A   +   F   I S          + +PTI  +K++     
Sbjct: 352 KLAAEITTFVHSEEDLNQAIKISNALFSGDIASLTAEEIEQGFKDVPTIQATKED----A 407

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            L+  +V++G   S  ++R  + + AI +N     + +  I   D      + +  GKK 
Sbjct: 408 KLVDWLVESGIEPSKRQSREDISNGAIYLNGERCQDLEKVISSSDRIEDKYLIIRKGKKK 467

Query: 411 HIICH 415
           + +  
Sbjct: 468 YFLIQ 472


>gi|262283750|ref|ZP_06061514.1| tyrosyl-tRNA synthetase [Streptococcus sp. 2_1_36FAA]
 gi|262260596|gb|EEY79298.1| tyrosyl-tRNA synthetase [Streptococcus sp. 2_1_36FAA]
          Length = 418

 Score =  493 bits (1270), Expect = e-137,   Method: Composition-based stats.
 Identities = 146/416 (35%), Positives = 224/416 (53%), Gaps = 11/416 (2%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L ERG I Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  G
Sbjct: 3   IFDELKERGLIFQTTDEEALRQELEEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKP +L+GG T +IGDPSF+D  R +   + ++  ++ I+G  +  + +  G+  A M+N
Sbjct: 63  HKPYALVGGATGLIGDPSFKDAERSLQTKETVEGWVKSIQGQLAGLLDFENGQNKAEMVN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W   I +ID LR++G +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF  L
Sbjct: 123 NYDWFSDISFIDFLRDVGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFFIL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            + ++  LQ+GGSDQWGN+  G +L  R        +T PL+T ASG K GK+   A+WL
Sbjct: 181 NQKHNVTLQIGGSDQWGNMTAGTELLRRKADKTGHVITVPLITDASGKKFGKSEGNAVWL 240

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATE 305
           N + TSPY  +Q+W N+ D D V F K  T L + EI+ + K      +E  A+KI+A E
Sbjct: 241 NADKTSPYEMYQFWMNVMDDDAVRFLKIFTFLSLDEIEEIRKQFEAAPHERLAQKILARE 300

Query: 306 ITTMVHGREEAEKAATAAMECFDMSI-------HSQHMPTISISKDEVSRGMGLLTLIVK 358
           + T+VHG +  ++A     + F  +I         Q +  +   + +    + ++ L+V 
Sbjct: 301 VVTLVHGEKAYQEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVQAEDNLNIVDLLVT 360

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           AG   S  +AR  +++ AI +N   I +    +   D        +  GKK + + 
Sbjct: 361 AGVVNSKRQAREDVQNGAIYVNGDRIQDLDYTLSDADKLENELTVIRRGKKKYFVL 416


>gi|255527746|ref|ZP_05394600.1| tyrosyl-tRNA synthetase [Clostridium carboxidivorans P7]
 gi|296187585|ref|ZP_06855979.1| tyrosyl-tRNA synthetase [Clostridium carboxidivorans P7]
 gi|255508562|gb|EET84948.1| tyrosyl-tRNA synthetase [Clostridium carboxidivorans P7]
 gi|296047542|gb|EFG86982.1| tyrosyl-tRNA synthetase [Clostridium carboxidivorans P7]
          Length = 407

 Score =  493 bits (1270), Expect = e-137,   Method: Composition-based stats.
 Identities = 177/405 (43%), Positives = 248/405 (61%), Gaps = 7/405 (1%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG I Q+++  E+  L + G    YIG+D TA SLHAGH   L L+  LQ  G
Sbjct: 3   IYDELVARGLIAQVTDEDEIKELINNGKGIFYIGFDPTADSLHAGHFMALCLMKRLQMAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           +KPI L+GGGT  +GDPS R + R MM  + IQ N +  K     FI++G  K  A+MLN
Sbjct: 63  NKPIVLLGGGTGHVGDPSGRTDLRTMMTPETIQHNCDCFKKQMERFIEFGDDK--AIMLN 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  + YI++LRE+G +FSVN ML  E  + R+  E+ LSFLEFNYMI+Q+YDF  L
Sbjct: 121 NAEWLLKLNYIEVLREVGVWFSVNNMLRAECYKQRM--EKGLSFLEFNYMIMQSYDFYHL 178

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            KNY C +Q+GG DQW N++ G  L         +A+T  LL  + G KMGKT SGA+WL
Sbjct: 179 HKNYGCNMQLGGDDQWSNMLGGTKLIHNKLGEDAYAMTITLLMNSEGKKMGKTASGAVWL 238

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           +   TSP+ F+QYWRN+ DADV+   + LT LP+ ++D M K +G ++NEAK+I+A E+T
Sbjct: 239 DPNKTSPFEFFQYWRNVADADVLKCIRMLTFLPLEQVDEMDKWEGSKLNEAKEILAYELT 298

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTN 366
            +VHG EEAEKA  A+   F       +MPT  IS D+++ G + +L L+V  G   S +
Sbjct: 299 KLVHGEEEAEKAKNASHALFAGGTDDSNMPTTEISDDQLNDGAISILDLMVACGLTASKS 358

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           EARR ++   + I++  + +    I L+   +   +K+  GKK +
Sbjct: 359 EARRVVQQGGVFIDDDKVESIDCNITLEQLKNG--VKIRKGKKTY 401


>gi|22536342|ref|NP_687193.1| tyrosyl-tRNA synthetase [Streptococcus agalactiae 2603V/R]
 gi|76798581|ref|ZP_00780811.1| tyrosyl-tRNA synthetase [Streptococcus agalactiae 18RS21]
 gi|77409650|ref|ZP_00786321.1| tyrosyl-tRNA synthetase [Streptococcus agalactiae COH1]
 gi|81455406|sp|Q8E241|SYY_STRA5 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|22533167|gb|AAM99065.1|AE014199_1 tyrosyl-tRNA synthetase [Streptococcus agalactiae 2603V/R]
 gi|76586067|gb|EAO62595.1| tyrosyl-tRNA synthetase [Streptococcus agalactiae 18RS21]
 gi|77171736|gb|EAO74934.1| tyrosyl-tRNA synthetase [Streptococcus agalactiae COH1]
          Length = 419

 Score =  493 bits (1270), Expect = e-137,   Method: Composition-based stats.
 Identities = 149/419 (35%), Positives = 229/419 (54%), Gaps = 11/419 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L ERG + Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  
Sbjct: 2   NIFDELKERGLVFQTTDEDALRKALEEGSVSYYTGYDPTADSLHLGHLVAILTSRRLQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP +L+GG T +IGDPSF+D  R +   + +     KI+G  S+F+++ TG   A+++
Sbjct: 62  GHKPYALVGGATGLIGDPSFKDVERSLQTKKTVVSWGNKIRGQLSNFLEFETGDNKAVLV 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W  +I +ID LR++G +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF E
Sbjct: 122 NNYDWFSNISFIDFLRDVGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFYE 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L KNY+  LQ+GGSDQWGN+  G +L  R        +T PL+T ++G K GK+   A+W
Sbjct: 180 LNKNYNVTLQIGGSDQWGNMTAGTELIRRKSNGVSHVMTVPLITDSTGKKFGKSEGNAVW 239

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIAT 304
           L+ + TSPY  +Q+W N+ DAD V F K  T L + EI+  R+   +      A+K +A 
Sbjct: 240 LDADKTSPYEMYQFWLNVMDADAVRFLKIFTFLSLKEIEDIRIQFEEAPHQRLAQKTLAR 299

Query: 305 EITTMVHGREEAEKAATAAMECFDMSI-------HSQHMPTISISKDEVSRGMGLLTLIV 357
           E+ T+VHG +  ++A     + F  +I         Q +  +     +    + ++ L+V
Sbjct: 300 EVVTLVHGEKAYKEAVNITEQLFAGNIKGLSVKELKQGLRGVPNYHVQTEDNLNIIDLLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            +G   S  +AR  + + AI IN   I + +  I   D        +  GKK + + + 
Sbjct: 360 TSGVVNSKRQAREDVSNGAIYINGDRIQDLEYTISENDKLENEITVIRRGKKKYFVLNF 418


>gi|332312039|gb|EGJ25134.1| Tyrosyl-tRNA synthetase [Listeria monocytogenes str. Scott A]
          Length = 429

 Score =  493 bits (1270), Expect = e-137,   Method: Composition-based stats.
 Identities = 155/425 (36%), Positives = 219/425 (51%), Gaps = 21/425 (4%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
            K + +  L  RG I+Q ++   L     +  ++ Y G D +  S+H GHL   M+L   
Sbjct: 9   MKMNIIDELEWRGAIYQQTDEEGLRKWVEEKQISLYCGIDPSGDSMHIGHLIPFMILRRF 68

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q  GH+PI L+GG T  IGDPS + E R++   ++I +N+E ++        +  G + A
Sbjct: 69  QNAGHRPIILVGGATGTIGDPSGKKEERKLQSMEQISKNVESLRVQLGKIFDF-EGNSAA 127

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            M+NN  W   +  +D LR+ G  F+VN MLS + V SRL  E  +SF EF Y ILQA D
Sbjct: 128 SMVNNYDWTKDVSILDFLRDYGKEFNVNTMLSKDIVASRL--EVGISFTEFAYQILQAMD 185

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTL 241
           F  L +  DCRLQ+GGSDQWGNI  G+DL  + +    K F LT PLLT A GTK GK+ 
Sbjct: 186 FNHLYEFNDCRLQIGGSDQWGNITAGLDLIRKKQGENAKAFGLTIPLLTKADGTKFGKSE 245

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAK 299
            GAIWLN E T+PY F+Q+W N DD DVV + K  T L  +EID +AK       +  A+
Sbjct: 246 GGAIWLNPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLTEAEIDELAKQVETEPHLRAAQ 305

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRG 349
           K +A E+T  VH  E  E+A   +   F   + +          + +PT      E    
Sbjct: 306 KTLAAEMTKFVHSEEALEQALKISKALFSGDVKALTADEIEQGFKDVPTFVAEDTE---- 361

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
             L+  +V  G   S  +AR  + + AI IN     + +  +   D        +  GKK
Sbjct: 362 ANLVDWLVTLGIEPSKRQAREDVANGAIYINGERQQDLEKIMDASDRIENKFTIVRRGKK 421

Query: 410 NHIIC 414
            + + 
Sbjct: 422 KYFLV 426


>gi|237724367|ref|ZP_04554848.1| tyrosyl-tRNA synthetase [Bacteroides sp. D4]
 gi|229437236|gb|EEO47313.1| tyrosyl-tRNA synthetase [Bacteroides dorei 5_1_36/D4]
          Length = 430

 Score =  493 bits (1270), Expect = e-137,   Method: Composition-based stats.
 Identities = 148/428 (34%), Positives = 226/428 (52%), Gaps = 22/428 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L+ RG +H +    E   L ++  VTAY+G D TA SLH GHL  +M+L   Q+ 
Sbjct: 2   NFVEELTWRGMVHTMMPGTE--ELLAKEQVTAYLGIDPTADSLHIGHLCGVMMLRHFQRC 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG-TGKTDALM 125
           GHKP++L+GG T +IGDPS + + R ++  + ++ N+  IK   + F+ +       A +
Sbjct: 60  GHKPLALVGGATGMIGDPSGKSQERNLLTEETLRHNVACIKKQLAKFLDFESDAPNKAEL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQAYD 183
           +NN  W+    ++D  REIG   +VN M++ +SV+ RL  E    LSF EF Y +LQ YD
Sbjct: 120 VNNYDWMKDFTFLDFAREIGKHITVNYMMAKDSVQKRLNGEARDGLSFTEFTYQLLQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ L +   C+LQMGGSDQWGNI  G +L  R    ++FALT PL+T A G K GKT SG
Sbjct: 180 FLHLYETKGCKLQMGGSDQWGNITTGAELIRRTNGGEVFALTCPLITKADGGKFGKTESG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKI 301
            IWL+   TSPY F+Q+W N+ D D   + K  T+L   E++       +   +   +K 
Sbjct: 240 NIWLDPRYTSPYKFYQFWLNVSDEDAARYIKIFTSLSQEEVEALTAEHAEAPHLRVLQKR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDEVS 347
           +A E+T MVH  E+   A  A+   F  +                 + +P   +SKD ++
Sbjct: 300 LAKEVTVMVHSEEDYNAAVEASGILFGNATSEALKKLDEDTLLAVFEGVPQFEVSKDVLA 359

Query: 348 RGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+  + L V  A    S  E R+ ++   + +N   ++     I   D      + +  
Sbjct: 360 EGVKAVDLFVDNAAVFASKGEMRKLVQGGGVSLNKEKLNAFDQVITTADLLDGKYLLVQR 419

Query: 407 GKKNHIIC 414
           GKKN+ + 
Sbjct: 420 GKKNYYLV 427


>gi|196039579|ref|ZP_03106884.1| tyrosine--tRNA ligase [Bacillus cereus NVH0597-99]
 gi|196029739|gb|EDX68341.1| tyrosine--tRNA ligase [Bacillus cereus NVH0597-99]
          Length = 420

 Score =  493 bits (1270), Expect = e-137,   Method: Composition-based stats.
 Identities = 149/424 (35%), Positives = 221/424 (52%), Gaps = 21/424 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG ++Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  
Sbjct: 2   NIIDELEWRGAVNQQTDEEGLRKLVEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P+ L+GG T  IGDPS R   R++   + +Q N++ +         +G G ++  M+
Sbjct: 62  GHHPVILIGGATGTIGDPSGRQSERQLQTLEVVQHNVDALTAQMKKLFDFG-GNSEVKMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I  I+ LR+ G  FS+N ML+ + V SRL  +  +SF EF Y ILQA DF  
Sbjct: 121 NNYDWTHEINIIEFLRDYGKNFSINSMLAKDIVASRL--DTGISFTEFTYQILQAMDFHH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKLFALTSPLLTTASGTKMGKTLSGA 244
           L    D +LQ+GGSDQWGNI  G+DL  +L+    K+F LT PLL  + GTK GK+  GA
Sbjct: 179 LYTKEDVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSAGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKII 302
           +WL+ E T+P+ F+Q+W N DD DVV + K  T L    ID +A     E    EA+K++
Sbjct: 239 VWLDPEKTTPFEFYQFWVNTDDRDVVKYLKYFTFLTKERIDELAAKVEAEPHKREAQKVL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGL 352
           A E+T  VHG E   +A       F   I S          + MPT   SK+       +
Sbjct: 299 AEEMTKFVHGEEALLQAVKITAALFSGDIKSLTADEIEQGFKEMPTFQSSKET----KNI 354

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           +  +V  G   S  +AR  + + AI +N   +++    + +++      I +  GKKN+ 
Sbjct: 355 VEWLVDLGIEPSRRQAREDINNGAISMNGEKVTDVGTDVTVENSFDGRFIIIRKGKKNYS 414

Query: 413 ICHL 416
           +  L
Sbjct: 415 LVKL 418


>gi|23099673|ref|NP_693139.1| tyrosyl-tRNA synthetase [Oceanobacillus iheyensis HTE831]
 gi|81741419|sp|Q8CXA5|SYY_OCEIH RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|22777903|dbj|BAC14174.1| tyrosyl-tRNA synthetase (tyrosine-tRNA ligase) [Oceanobacillus
           iheyensis HTE831]
          Length = 428

 Score =  493 bits (1270), Expect = e-137,   Method: Composition-based stats.
 Identities = 152/425 (35%), Positives = 229/425 (53%), Gaps = 17/425 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D L  L  RG IHQ ++   L+       VT Y G+D TA SLH GHL  L +L   Q+ 
Sbjct: 2   DILQDLESRGLIHQTTDRERLEKHLQNNQVTLYCGFDPTADSLHIGHLVPLTMLKRFQQA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKPI+L+GGGT +IGDPS R   R +   + +     K++   +  +   +  ++  ++
Sbjct: 62  GHKPIALVGGGTGMIGDPSGRSSERSLNAPEVVHGFTSKLQQQIAKLVDMESNASENTVV 121

Query: 127 --NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
             NN  WL ++  ID LR+ G  F +N ML+ ESV +R+  EQ ++F EF+YMILQ+ D+
Sbjct: 122 ARNNHDWLGNMTIIDFLRDAGKHFGINYMLAKESVSARI--EQGITFTEFSYMILQSLDY 179

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERL-----KTPKLFALTSPLLTTASGTKMGK 239
           ++L +  +C LQ+GGSDQWGNI  G++L  R      +  ++F LT PL+T A GTK GK
Sbjct: 180 LKLYEEENCTLQIGGSDQWGNITAGMELIRRSRENLDENIEVFGLTVPLITKADGTKFGK 239

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINE 297
           T   AIWL+   TSPY F+Q+W N DD DV+ F +  T L + EI  + K      E   
Sbjct: 240 TAGNAIWLDASKTSPYEFYQFWFNTDDRDVIRFIRYFTFLSVEEITELEKEVETQPEKRV 299

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVS------RGMG 351
           A+K +A E+T  VH     E+A       F   I   ++  +  +  +V         +G
Sbjct: 300 AQKRLAEEMTKTVHDEAALEQAKRITNALFSGDIKQLNVEEVEQAFKDVPNHIITREPVG 359

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           L+ L+V A  ++S  +AR  +K+ AI IN   + +    ++ +D        +  GKK +
Sbjct: 360 LIDLLVDAKISSSKRQAREDVKNGAIYINGERVQDMNYHVEEKDHLGNKFTVVRRGKKKY 419

Query: 412 IICHL 416
            +  +
Sbjct: 420 FLIQV 424


>gi|228942237|ref|ZP_04104777.1| Tyrosyl-tRNA synthetase [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|228975167|ref|ZP_04135726.1| Tyrosyl-tRNA synthetase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228981806|ref|ZP_04142101.1| Tyrosyl-tRNA synthetase [Bacillus thuringiensis Bt407]
 gi|228777918|gb|EEM26190.1| Tyrosyl-tRNA synthetase [Bacillus thuringiensis Bt407]
 gi|228784688|gb|EEM32708.1| Tyrosyl-tRNA synthetase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228817571|gb|EEM63656.1| Tyrosyl-tRNA synthetase [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|326942891|gb|AEA18787.1| tyrosyl-tRNA synthetase [Bacillus thuringiensis serovar chinensis
           CT-43]
          Length = 419

 Score =  493 bits (1269), Expect = e-137,   Method: Composition-based stats.
 Identities = 147/424 (34%), Positives = 221/424 (52%), Gaps = 21/424 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG ++Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  
Sbjct: 2   NIIDELEWRGAVNQQTDEEGLRKLVEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P+ L+GG T  IGDPS R   R++   + +Q N++ +         +G G ++  M+
Sbjct: 62  GHHPVILIGGATGTIGDPSGRQSERQLQTLEVVQHNVDALTAQMKKLFDFG-GNSEVKMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I  I+ LR+ G  FS+N ML+ + V SRL  +  +SF EF Y ILQA DF  
Sbjct: 121 NNYDWTHEINIIEFLRDYGKNFSINSMLAKDIVASRL--DTGISFTEFTYQILQAMDFHH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKLFALTSPLLTTASGTKMGKTLSGA 244
           L    D +LQ+GGSDQWGNI  G+DL  +L+    K+F LT PLL  + GTK GK+  GA
Sbjct: 179 LYTKEDVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSAGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKII 302
           +WL+ E T+P+ F+Q+W N DD DV+ + K  T L    ID +A          EA+K++
Sbjct: 239 VWLDPEKTTPFEFYQFWVNTDDRDVIKYLKYFTFLTKERIDELAAKVETEPHKREAQKVL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGL 352
           A E+T  VHG E   +A       F   I S          + MPT   SK+       +
Sbjct: 299 AEEMTKFVHGEEALLQAEKITAALFSGDIKSLTADEIEQGFKEMPTFQSSKET----KNI 354

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           +  +V  G   S  +AR  + + AI +N   +++  + + +++      I +  GKKN+ 
Sbjct: 355 VEWLVDLGIEPSRRQAREDINNGAISMNGEKVTDVGIDVTVENSFDGRFIIIRKGKKNYS 414

Query: 413 ICHL 416
           +  L
Sbjct: 415 LVKL 418


>gi|242374020|ref|ZP_04819594.1| tyrosyl-tRNA synthetase [Staphylococcus epidermidis M23864:W1]
 gi|242348271|gb|EES39873.1| tyrosyl-tRNA synthetase [Staphylococcus epidermidis M23864:W1]
          Length = 420

 Score =  493 bits (1269), Expect = e-137,   Method: Composition-based stats.
 Identities = 147/421 (34%), Positives = 227/421 (53%), Gaps = 20/421 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            +  L  RG I+Q ++ + ++ L ++  VT Y G D TA SLH GHL   + L   Q+ G
Sbjct: 5   LIDDLKWRGLIYQQTDEQGIEDLLNKEQVTLYCGADPTADSLHIGHLLPFLTLRRFQEHG 64

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+PI L+GGGT +IGDPS + E R +    +++ N++ +        ++GT K  A+++N
Sbjct: 65  HRPIVLIGGGTGMIGDPSGKSEERVLQTEDQVEANVQGLSKQMHRLFEFGTDKG-AVLVN 123

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N+ WL  I  I  LR+ G    VN ML  +S+++RL  E  +S+ EF Y ILQA DF  L
Sbjct: 124 NKDWLGQISLISFLRDYGKHVGVNYMLGKDSIQTRL--EHGISYTEFTYTILQAIDFGHL 181

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLG-ERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
            +  +C++Q+GGSDQWGNI  GI+L        + F LT PL+T + G K GK+ SGA+W
Sbjct: 182 NRELNCKIQVGGSDQWGNITSGIELMRRMYGQTEAFGLTIPLVTKSDGKKFGKSESGAVW 241

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA--KLQGKEINEAKKIIAT 304
           L+ E TSPY F+Q+W N  D DV+ F K  T L   EIDR+   K +   + EA+K +A 
Sbjct: 242 LDPEKTSPYEFYQFWINQSDEDVIKFLKYFTFLDKEEIDRLEQSKEEAPHLREAQKALAE 301

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLT 354
            +T  +HG E    A   +   F   + S          + +P +++S    S    ++ 
Sbjct: 302 NVTKFIHGEEALNDAIRISKALFSGDLKSLSGKELKEGFKDVPQVTLS----SETTNIIE 357

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +++ G A+S  +AR  + + AI IN     +   +   +D        +  GKK + + 
Sbjct: 358 ALIETGIASSKRQAREDVNNGAIYINGERQQSVDYEFSNEDKIDNEFTIIRRGKKKYFMV 417

Query: 415 H 415
           +
Sbjct: 418 N 418


>gi|223043549|ref|ZP_03613594.1| tyrosyl-tRNA synthetase [Staphylococcus capitis SK14]
 gi|222443037|gb|EEE49137.1| tyrosyl-tRNA synthetase [Staphylococcus capitis SK14]
          Length = 420

 Score =  493 bits (1269), Expect = e-137,   Method: Composition-based stats.
 Identities = 149/421 (35%), Positives = 228/421 (54%), Gaps = 20/421 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            +  L  RG I+Q ++ + ++ L ++  VT Y G D TA SLH GHL   + L   Q+ G
Sbjct: 5   LIEDLKWRGLIYQQTDEQGIEDLLNKEQVTLYCGADPTADSLHIGHLLPFLTLRRFQEHG 64

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+PI L+GGGT +IGDPS + E R +   ++++ N++ +        ++GT K  A+++N
Sbjct: 65  HRPIVLIGGGTGMIGDPSGKSEERVLQTEEQVEANVQGLSKQMHRLFEFGTDKG-AVLVN 123

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N+ WL  I  I  LR+ G    VN ML  +S+++RL  E  +S+ EF Y ILQA DF  L
Sbjct: 124 NKDWLGQISLISFLRDYGKHVGVNYMLGKDSIQTRL--EHGISYTEFTYTILQAIDFGHL 181

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLG-ERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
            +  +C++Q+GGSDQWGNI  GI+L        + F LT PL+T + G K GK+ SGA+W
Sbjct: 182 NRELNCKIQVGGSDQWGNITSGIELMRRMYGQTEAFGLTIPLVTKSDGKKFGKSESGAVW 241

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA--KLQGKEINEAKKIIAT 304
           L+ E TSPY F+Q+W N  D DV+ F K  T L   EIDR+   K +   + EA+K +A 
Sbjct: 242 LDPEKTSPYEFYQFWINQSDEDVIKFLKYFTFLDKEEIDRLEQSKEEAPHLREAQKALAE 301

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLT 354
            +T  +HG E    A   +   F   + S          + +P +S+S    S    ++ 
Sbjct: 302 NVTKFIHGEEALNDAIRISKALFSGDLKSLTGKELKEGFKDVPQVSLS----SETTNIIE 357

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +++ G ATS  +AR  + + AI IN     +   ++   D        +  GKK + + 
Sbjct: 358 ALIETGIATSKRQAREDVNNGAIYINGERQQSVDYELSNDDKIDNEFTIIRRGKKKYFMV 417

Query: 415 H 415
           +
Sbjct: 418 N 418


>gi|294084595|ref|YP_003551353.1| Tyrosyl-tRNA synthetase, class Ib [Candidatus Puniceispirillum
           marinum IMCC1322]
 gi|292664168|gb|ADE39269.1| Tyrosyl-tRNA synthetase, class Ib [Candidatus Puniceispirillum
           marinum IMCC1322]
          Length = 414

 Score =  493 bits (1269), Expect = e-137,   Method: Composition-based stats.
 Identities = 199/416 (47%), Positives = 274/416 (65%), Gaps = 3/416 (0%)

Query: 3   AFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
            +KSD +   ++RG+IHQ +N   LD   S  V+ AYIG+D TA SLH G L Q+M+L  
Sbjct: 2   TYKSDLIQHYTDRGYIHQATNIEALDDAASTKVLPAYIGFDCTADSLHVGSLVQIMMLRI 61

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD 122
           LQKTGHKPI LMGGGT+ +GDPS +D +R ++  Q+I+ N   IK +F  ++K+G G TD
Sbjct: 62  LQKTGHKPIVLMGGGTTKVGDPSGKDTARPLLSDQDIEANKNGIKKVFEKYLKFGDGPTD 121

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
           A+M++N  WL ++ YI  LR+ G  FS+NRM+  +SV+ RL REQ LSFLEFNY ILQAY
Sbjct: 122 AIMVDNADWLDTLGYIRFLRDFGPHFSINRMMGMDSVKLRLDREQPLSFLEFNYAILQAY 181

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DF+EL + Y C LQMGGSDQWGNI+ GIDL  R+   ++F LTSPL+TTASG KMGK+  
Sbjct: 182 DFLELRRRYGCLLQMGGSDQWGNIVTGIDLTRRVDAQEIFGLTSPLITTASGAKMGKSAD 241

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKII 302
           GA+WLN +  S ++FWQ+WRN +DADV  F    T LPM E++R+  L+G +INEAK I+
Sbjct: 242 GAVWLNDDKLSAFDFWQFWRNTEDADVARFLALFTELPMDEVNRLGALEGADINEAKIIL 301

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFA 362
           A E T++ HG E A  A   A + F  S  S  +P   ++    +  + ++  +   GFA
Sbjct: 302 ANEATSLCHGTEAAAHAMQTAQQTFAGSGVSDGLPQFDLAAGR-AEALDMVEALKIVGFA 360

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLCG 418
            S  EARR ++    ++N+  I++E +Q+ L DF      K+S GKK H +  + G
Sbjct: 361 ASNGEARRLIRGGGARVNDVAINDENMQLTLSDFIDGK-AKISAGKKRHAML-VAG 414


>gi|87310770|ref|ZP_01092897.1| tyrosyl-tRNA synthetase [Blastopirellula marina DSM 3645]
 gi|87286527|gb|EAQ78434.1| tyrosyl-tRNA synthetase [Blastopirellula marina DSM 3645]
          Length = 449

 Score =  493 bits (1269), Expect = e-137,   Method: Composition-based stats.
 Identities = 160/427 (37%), Positives = 237/427 (55%), Gaps = 14/427 (3%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
             +D  + L  RG ++Q +    L    ++   T Y G+D TA SLH G L  LM L   
Sbjct: 21  LMNDIFADLKWRGLVYQTTADDHLQKWLNEKPRTVYAGFDPTAESLHVGSLLPLMQLRRF 80

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           QK GH+PI+L+GG T +IGDPS +   R ++   ++++N+  IK   +  + +      A
Sbjct: 81  QKAGHRPIALVGGATGMIGDPSGKSAERNLLSVDQLEQNVAGIKAQVAKLVDFDETPAGA 140

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAY 182
            ++NN  W+    Y++ LR++G  F VN M++ +S+R+RL+RE   +S+ EF+YM+LQAY
Sbjct: 141 QLVNNFDWMNKFTYLEFLRDVGKHFPVNVMMAKDSIRNRLEREDSGISYTEFSYMLLQAY 200

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DFV L + YDC LQ+GGSDQWGNI  G +LG R+   +LF +T PLLT A GTKMGKT S
Sbjct: 201 DFVHLNQAYDCELQIGGSDQWGNITAGTELGRRMHQKQLFGMTCPLLTKADGTKMGKTES 260

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEA--KK 300
           GAIWL+ E TSPY F+QYW N+ D D     + LT L   EI+ + K + +E ++   +K
Sbjct: 261 GAIWLSAERTSPYAFYQYWFNVADEDAGKCLRFLTELSHEEIETLDKSRAEEPHQRASQK 320

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEV-SRG 349
            +A  +T ++HG E    A  A    F  +I              +P+  +++D +   G
Sbjct: 321 SLAEHLTQLIHGDEGLSTARRATEIFFGGTIEDMNDAQLGQIFADVPSSELARDRLTGDG 380

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
           + LL   V+AG A S  EARR +      +NN         +  +D  S   + L  GKK
Sbjct: 381 LSLLDAFVEAGLAKSKGEARRAISQGGAYVNNVRAEGVDQALTERDLASETVMVLRSGKK 440

Query: 410 NHIICHL 416
            + +   
Sbjct: 441 KYALLRF 447


>gi|229072555|ref|ZP_04205757.1| Tyrosyl-tRNA synthetase [Bacillus cereus F65185]
 gi|228710531|gb|EEL62504.1| Tyrosyl-tRNA synthetase [Bacillus cereus F65185]
          Length = 419

 Score =  492 bits (1268), Expect = e-137,   Method: Composition-based stats.
 Identities = 147/424 (34%), Positives = 220/424 (51%), Gaps = 21/424 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG ++Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  
Sbjct: 2   NIIDELEWRGAVNQQTDEEGLRKLVEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P+ L+GG T  IGDPS R   R++   + +Q N++ +         +G G ++  M+
Sbjct: 62  GHHPVILIGGATGTIGDPSGRQSERQLQTLEVVQHNVDALTAQMKKLFDFG-GNSEVKMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I  I+ LR+ G  FS+N ML+ + V SRL  +  +SF EF Y ILQA DF  
Sbjct: 121 NNYDWTHEINIIEFLRDYGKNFSINSMLAKDIVASRL--DTGISFTEFTYQILQAMDFHH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKLFALTSPLLTTASGTKMGKTLSGA 244
           L    D +LQ+GGSDQWGNI  G+DL  +L+    K+F LT PLL  + GTK GK+  GA
Sbjct: 179 LYTKEDVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSAGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKII 302
           +WL+ E T+P+ F+Q+W N DD DV+ + K  T L    ID +A          EA+K++
Sbjct: 239 VWLDPEKTTPFEFYQFWVNTDDRDVIKYLKYFTFLTKERIDELAAKVETEPHKREAQKVL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGL 352
           A E+T  VHG E   +A       F   I S          + MPT   SK+       +
Sbjct: 299 AEEMTKFVHGEEAFLQAEKITAALFSGDIKSLTADEIEQGFKEMPTFQASKET----KNI 354

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           +  +V  G   S  +AR  + + AI +N   +++    + +++      I +  GKKN+ 
Sbjct: 355 VEWLVDLGIEPSRRQAREDINNGAISMNGEKVTDVGTDVTVENSFDGRFIIIRKGKKNYS 414

Query: 413 ICHL 416
           +  L
Sbjct: 415 LVKL 418


>gi|206976616|ref|ZP_03237521.1| tyrosyl-tRNA synthetase [Bacillus cereus H3081.97]
 gi|217962550|ref|YP_002341122.1| tyrosyl-tRNA synthetase [Bacillus cereus AH187]
 gi|229141803|ref|ZP_04270331.1| Tyrosyl-tRNA synthetase [Bacillus cereus BDRD-ST26]
 gi|206745102|gb|EDZ56504.1| tyrosyl-tRNA synthetase [Bacillus cereus H3081.97]
 gi|217068299|gb|ACJ82549.1| tyrosyl-tRNA synthetase [Bacillus cereus AH187]
 gi|228641639|gb|EEK97942.1| Tyrosyl-tRNA synthetase [Bacillus cereus BDRD-ST26]
          Length = 419

 Score =  492 bits (1268), Expect = e-137,   Method: Composition-based stats.
 Identities = 149/424 (35%), Positives = 220/424 (51%), Gaps = 21/424 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG I+Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  
Sbjct: 2   NIIDELEWRGAINQQTDEEGLRKLVEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P+ L+GG T  IGDPS R   R++   + +Q N++ +         +G G ++  M+
Sbjct: 62  GHHPVILIGGATGTIGDPSGRQSERQLQTLEVVQHNVDALTAQMKKLFDFG-GNSEVKMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I  I+ LR+ G  FS+N ML+ + V SRL  +  +SF EF Y ILQA DF  
Sbjct: 121 NNYDWTHEINIIEFLRDYGKNFSINSMLAKDIVASRL--DTGISFTEFTYQILQAMDFHH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKLFALTSPLLTTASGTKMGKTLSGA 244
           L    D +LQ+GGSDQWGNI  G+DL  +L+    K+F LT PLL  + GTK GK+  GA
Sbjct: 179 LYTKEDVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSAGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA--KLQGKEINEAKKII 302
           +WL+ E T+P+ F+Q+W N DD DVV + K  T L    ID +A          EA+K++
Sbjct: 239 VWLDPEKTTPFEFYQFWVNTDDRDVVKYLKYFTFLTKERIDELAVKVETEPHKREAQKVL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGL 352
           A E+T  VHG E   +A       F   I S          + MPT   SK+       +
Sbjct: 299 AEEMTKFVHGEEALLQAVKITGALFSGDIKSLTADEIEQGFKEMPTFQSSKET----KNI 354

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           +  +V  G   S  +AR  + + AI +N   +++    + +++      I +  GKKN+ 
Sbjct: 355 VEWLVDLGIEPSRRQAREDINNGAISMNGEKVTDVGTDVTVENSFDGRFIIIRKGKKNYS 414

Query: 413 ICHL 416
           +  L
Sbjct: 415 LVKL 418


>gi|212692526|ref|ZP_03300654.1| hypothetical protein BACDOR_02022 [Bacteroides dorei DSM 17855]
 gi|237709152|ref|ZP_04539633.1| tyrosyl-tRNA synthetase [Bacteroides sp. 9_1_42FAA]
 gi|265752681|ref|ZP_06088250.1| tyrosyl-tRNA synthetase [Bacteroides sp. 3_1_33FAA]
 gi|212664937|gb|EEB25509.1| hypothetical protein BACDOR_02022 [Bacteroides dorei DSM 17855]
 gi|229456848|gb|EEO62569.1| tyrosyl-tRNA synthetase [Bacteroides sp. 9_1_42FAA]
 gi|263235867|gb|EEZ21362.1| tyrosyl-tRNA synthetase [Bacteroides sp. 3_1_33FAA]
          Length = 430

 Score =  492 bits (1268), Expect = e-137,   Method: Composition-based stats.
 Identities = 148/428 (34%), Positives = 226/428 (52%), Gaps = 22/428 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L+ RG +H +    E   L ++  VTAY+G D TA SLH GHL  +M+L   Q+ 
Sbjct: 2   NFVEELTWRGMVHTMMPGTE--ELLAKEQVTAYLGIDPTADSLHIGHLCGVMMLRHFQRC 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG-TGKTDALM 125
           GHKP++L+GG T +IGDPS + + R ++  + ++ N+  IK   + F+ +       A +
Sbjct: 60  GHKPLALVGGATGMIGDPSGKSQERNLLTEETLRHNVACIKKQLAKFLDFESDAPNKAEL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQAYD 183
           +NN  W+    ++D  REIG   +VN M++ +SV+ RL  E    LSF EF Y +LQ YD
Sbjct: 120 VNNYDWMKDFTFLDFAREIGKHITVNYMMAKDSVQKRLNGEARDGLSFTEFTYQLLQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ L +   C+LQMGGSDQWGNI  G +L  R    ++FALT PL+T A G K GKT SG
Sbjct: 180 FLHLYETKGCKLQMGGSDQWGNITTGAELIRRTNGGEVFALTCPLITKADGGKFGKTESG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKI 301
            IWL+   TSPY F+Q+W N+ D D   + K  T+L   E++       +   +   +K 
Sbjct: 240 NIWLDPRYTSPYKFYQFWLNVSDEDAARYIKIFTSLSQEEVEVLTAEHAEAPHLRVLQKR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDEVS 347
           +A E+T MVH  E+   A  A+   F  +                 + +P   +SKD ++
Sbjct: 300 LAKEVTVMVHSEEDYNAAVEASGILFGNATSEALKKLDEDTLLAVFEGVPQFEVSKDVLA 359

Query: 348 RGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+  + L V  A    S  E R+ ++   + +N   ++     I   D      + +  
Sbjct: 360 EGVKAVDLFVDNAAVFASKGEMRKLVQGGGVSLNKEKLNAFDQVITTADLLDGKYLLVQR 419

Query: 407 GKKNHIIC 414
           GKKN+ + 
Sbjct: 420 GKKNYYLV 427


>gi|218231964|ref|YP_002369874.1| tyrosyl-tRNA synthetase [Bacillus cereus B4264]
 gi|229153258|ref|ZP_04281436.1| Tyrosyl-tRNA synthetase [Bacillus cereus m1550]
 gi|296505505|ref|YP_003667205.1| tyrosyl-tRNA synthetase [Bacillus thuringiensis BMB171]
 gi|218159921|gb|ACK59913.1| tyrosine--tRNA ligase [Bacillus cereus B4264]
 gi|228629862|gb|EEK86513.1| Tyrosyl-tRNA synthetase [Bacillus cereus m1550]
 gi|296326557|gb|ADH09485.1| tyrosyl-tRNA synthetase [Bacillus thuringiensis BMB171]
          Length = 420

 Score =  492 bits (1268), Expect = e-137,   Method: Composition-based stats.
 Identities = 148/424 (34%), Positives = 221/424 (52%), Gaps = 21/424 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG ++Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  
Sbjct: 2   NIIDELEWRGAVNQQTDEEGLRKLVEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P+ L+GG T  IGDPS R   R++   + +Q N++ +         +G G ++  M+
Sbjct: 62  GHHPVILIGGATGTIGDPSGRQSERQLQTLEVVQHNVDALTAQMKKLFDFG-GNSEVKMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I  I+ LR+ G  FS+N ML+ + V SRL  +  +SF EF Y ILQA DF  
Sbjct: 121 NNYDWTHEINIIEFLRDYGKNFSINSMLAKDIVASRL--DTGISFTEFTYQILQAMDFHH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKLFALTSPLLTTASGTKMGKTLSGA 244
           L    D +LQ+GGSDQWGNI  G+DL  +L+    K+F LT PLL  + GTK GK+  GA
Sbjct: 179 LYTKEDVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSAGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKII 302
           +WL+ E T+P+ F+Q+W N DD DV+ + K  T L    ID +A     E    EA+K++
Sbjct: 239 VWLDPEKTTPFEFYQFWVNTDDRDVIKYLKYFTFLTKERIDELATKVEAEPHKREAQKVL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGL 352
           A E+T  VHG E   +A       F   I S          + MPT   SK+       +
Sbjct: 299 AEEMTKFVHGEEAFLQAEKITAALFSGDIKSLTADEIEQGFKEMPTFQSSKET----KNI 354

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           +  +V  G   S  +AR  + + AI +N   +++    + +++      I +  GKKN+ 
Sbjct: 355 VEWLVDLGIEPSRRQAREDINNGAISMNGEKVTDVGTDVTVENSFDGRFIIIRKGKKNYS 414

Query: 413 ICHL 416
           +  L
Sbjct: 415 LVKL 418


>gi|229094185|ref|ZP_04225264.1| Tyrosyl-tRNA synthetase [Bacillus cereus Rock3-42]
 gi|228689177|gb|EEL42999.1| Tyrosyl-tRNA synthetase [Bacillus cereus Rock3-42]
          Length = 420

 Score =  492 bits (1268), Expect = e-137,   Method: Composition-based stats.
 Identities = 148/424 (34%), Positives = 220/424 (51%), Gaps = 21/424 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG ++Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  
Sbjct: 2   NIIDELEWRGAVNQQTDEEGLRKLVEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P+ L+GG T  IGDPS R   R++   + +Q N++ +         +G G ++  M+
Sbjct: 62  GHHPVILIGGATGTIGDPSGRQSERQLQTLEVVQHNVDALTAQMKKLFDFG-GNSEVKMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I  I+ LR+ G  FS+N ML+ + V SRL  +  +SF EF Y ILQA DF  
Sbjct: 121 NNYDWTHEINIIEFLRDYGKNFSINSMLAKDIVASRL--DTGISFTEFTYQILQAMDFHH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKLFALTSPLLTTASGTKMGKTLSGA 244
           L    D +LQ+GGSDQWGNI  G+DL  +L+    K+F LT PLL  + GTK GK+  GA
Sbjct: 179 LYTKEDVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSAGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKII 302
           +WL+ E T+P+ F+Q+W N DD DVV + K  T L    ID +A          EA+K++
Sbjct: 239 VWLDPEKTTPFEFYQFWVNTDDRDVVKYLKYFTFLTKERIDELAAKVETEPHKREAQKVL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGL 352
           A E+T  VHG E   +A       F   I S          + MPT   SK+       +
Sbjct: 299 AEEMTKFVHGEEALLQAVKITAALFSGDIKSLTADEIEQGFKEMPTFQSSKET----KNI 354

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           +  +V  G   S  +AR  + + AI +N   +++    + +++      I +  GKKN+ 
Sbjct: 355 VEWLVDLGIEPSRRQAREDINNGAISMNGEKVTDVGTDVTVENSFDGRFIIIRKGKKNYS 414

Query: 413 ICHL 416
           +  L
Sbjct: 415 LVKL 418


>gi|16803638|ref|NP_465123.1| tyrosyl-tRNA synthetase [Listeria monocytogenes EGD-e]
 gi|224499178|ref|ZP_03667527.1| tyrosyl-tRNA synthetase [Listeria monocytogenes Finland 1988]
 gi|254824342|ref|ZP_05229343.1| tyrosyl-tRNA synthetase [Listeria monocytogenes FSL J1-194]
 gi|254832000|ref|ZP_05236655.1| tyrosyl-tRNA synthetase [Listeria monocytogenes 10403S]
 gi|255522125|ref|ZP_05389362.1| tyrosyl-tRNA synthetase [Listeria monocytogenes FSL J1-175]
 gi|81508953|sp|Q8Y6T4|SYY_LISMO RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|16411027|emb|CAC99676.1| tyrosyl-tRNA synthetase [Listeria monocytogenes EGD-e]
 gi|293593576|gb|EFG01337.1| tyrosyl-tRNA synthetase [Listeria monocytogenes FSL J1-194]
          Length = 419

 Score =  492 bits (1268), Expect = e-137,   Method: Composition-based stats.
 Identities = 154/422 (36%), Positives = 218/422 (51%), Gaps = 21/422 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG I+Q ++   L     +  ++ Y G D +  S+H GHL   M+L   Q  
Sbjct: 2   NIIDELEWRGAIYQQTDEEGLRKWVEEKQISLYCGIDPSGDSMHIGHLIPFMILRRFQNA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI L+GG T  IGDPS + E R++   ++I +N+E ++        +  G + A M+
Sbjct: 62  GHRPIILVGGATGTIGDPSGKKEERKLQSMEQISKNVESLRVQLGKIFDF-EGNSAASMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   +  +D LR+ G  F+VN MLS + V SRL  E  +SF EF Y ILQA DF  
Sbjct: 121 NNYDWTKDVSILDFLRDYGKEFNVNTMLSKDIVASRL--EVGISFTEFAYQILQAMDFNH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSGA 244
           L +  DCRLQ+GGSDQWGNI  G+DL  + +    K F LT PLLT A GTK GK+  GA
Sbjct: 179 LYEFNDCRLQIGGSDQWGNITAGLDLIRKKQGENAKAFGLTIPLLTKADGTKFGKSEGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKII 302
           IWLN E T+PY F+Q+W N DD DVV + K  T L  +EID +AK       +  A+K +
Sbjct: 239 IWLNPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLTEAEIDELAKQVETEPHLRAAQKTL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGL 352
           A E+T  VH  E  E+A   +   F   + +          + +PT      E      L
Sbjct: 299 AAEMTKFVHSEEALEQALKISKALFSGDVKALTADEIEQGFKDVPTFVAEDSE----ANL 354

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           +  +V  G   S  +AR  + + AI IN     + +  +   D        +  GKK + 
Sbjct: 355 VDWLVTLGIEPSKRQAREDVGNGAIYINGERQQDLEKIMDASDRIENKFTIVRRGKKKYF 414

Query: 413 IC 414
           + 
Sbjct: 415 LV 416


>gi|306820971|ref|ZP_07454591.1| tyrosine--tRNA ligase [Eubacterium yurii subsp. margaretiae ATCC
           43715]
 gi|304551085|gb|EFM39056.1| tyrosine--tRNA ligase [Eubacterium yurii subsp. margaretiae ATCC
           43715]
          Length = 407

 Score =  492 bits (1268), Expect = e-137,   Method: Composition-based stats.
 Identities = 187/411 (45%), Positives = 255/411 (62%), Gaps = 5/411 (1%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+   +L ERGFI Q S+  EL  L     VT Y GYD TA SLH GH  Q + +  +Q 
Sbjct: 2   SNVFDVLKERGFIAQTSHEEELRELFENERVTFYTGYDATADSLHVGHFLQAIAMRHMQL 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+PI L+GGGT++IGDPS R + R+M+  ++I+ N E+ K   S FI +   K  A++
Sbjct: 62  AGHRPIVLIGGGTTMIGDPSGRTDMRQMLTPEDIKNNGERFKEQLSRFIDFSDDK--AIL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
            +N  WL +++YI  LREIG+ FSVNRML+ E  +SR+  E+ LSFLEFNYMI+QAYDF 
Sbjct: 120 EDNAHWLMNLEYIPFLREIGAEFSVNRMLTAECFKSRM--EKGLSFLEFNYMIMQAYDFY 177

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L K YDC++Q GG DQW NI+ G DL  R    K FALT  LLTT+ G KMGKT+SGA+
Sbjct: 178 MLNKMYDCKVQCGGDDQWSNILAGADLVRRKSQKKAFALTFNLLTTSDGKKMGKTMSGAL 237

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
           WL+KE TSPY F+QYWRNI+DA V      LT LPM E+ R+  L+   INEAK+++A E
Sbjct: 238 WLDKEKTSPYEFFQYWRNIEDASVEKCLGLLTFLPMDEVRRLGALKDSAINEAKEVLAYE 297

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
            T +VHG+EEA+KA  AA   F  +  S + PT  ++K ++ +G+ +L L+     + S 
Sbjct: 298 TTKLVHGKEEADKALEAARAIFSSNASSANAPTTIVNKADLDKGINILELLKLTNLSPSN 357

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            E RR ++   I +N+  I++    +          I +  GKK      +
Sbjct: 358 AEGRRLIQQGGITVNDEKITDTNFMVDTS-MMKDDVIMIRKGKKVFHQVKI 407


>gi|227833163|ref|YP_002834870.1| Tyrosyl-tRNA synthetase [Corynebacterium aurimucosum ATCC 700975]
 gi|227454179|gb|ACP32932.1| Tyrosyl-tRNA synthetase [Corynebacterium aurimucosum ATCC 700975]
          Length = 461

 Score =  492 bits (1268), Expect = e-137,   Method: Composition-based stats.
 Identities = 148/421 (35%), Positives = 225/421 (53%), Gaps = 15/421 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG I+Q ++   L   C +  +T Y G+D T  SLHAGHL  +++L   QK 
Sbjct: 44  NIIDELQWRGLINQSTDLDALREAC-EEPITLYCGFDPTGDSLHAGHLVPMIMLRRFQKA 102

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH PI+L GG T  IGDP    E R M+  + I +N+  IK     FI +  G+  A M+
Sbjct: 103 GHHPIALAGGATGQIGDPRDVGE-RTMLSQETINDNMVAIKKQLRQFIDFA-GENAATMV 160

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   +  ID LR++G  FS+N ML  ++V+ RL+ +  +S+ EF+YM+LQ+ D+V 
Sbjct: 161 NNADWTSKMTVIDFLRDVGKNFSLNTMLDRDTVKRRLESD-GISYTEFSYMLLQSNDYVH 219

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA-I 245
           L   +DC LQ+GG DQWGNI+ G+DL  R+K  K+  LT PL+T A G K GK+  G  +
Sbjct: 220 LHDEFDCILQIGGGDQWGNIVSGVDLNRRVKGAKVHGLTVPLVTDAQGQKFGKSTGGGKL 279

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIA 303
           WL+ E TSPY+++QY+ N  D+ V+ + +  T L   EI    +   +E    EA++ +A
Sbjct: 280 WLDPEKTSPYSWYQYFLNAGDSVVIDYLRWFTFLSQEEIAEYEQKVAEEPFRREAQRRLA 339

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQ--------HMPTISISKDEVSRGMGLLTL 355
            E+T +VHG E  +    A    F  +  +          +   +++         ++ L
Sbjct: 340 QEMTNLVHGEEATKSVKLATQALFGKAELADLDEQTLVGALSETTVADIAAGEPRTIVDL 399

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +V  G A S   ARR +K     +NN  I +++ +   +D      + L  GKKN     
Sbjct: 400 LVACGLADSKGAARRTIKEGGAYVNNQRIESDEWEPAAEDLLHGAWLVLRRGKKNFAGAK 459

Query: 416 L 416
           L
Sbjct: 460 L 460


>gi|289523815|ref|ZP_06440669.1| tyrosine--tRNA ligase [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
 gi|289502959|gb|EFD24123.1| tyrosine--tRNA ligase [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
          Length = 425

 Score =  492 bits (1268), Expect = e-137,   Method: Composition-based stats.
 Identities = 160/430 (37%), Positives = 245/430 (56%), Gaps = 22/430 (5%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           MP    + L IL ERGF+   S+P EL  +    V + YIG+D TA SLH GHL  +M L
Sbjct: 1   MPE---NVLKILQERGFVEWCSDPDELSQVFQSRVTSGYIGFDPTADSLHVGHLVPIMGL 57

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            WLQ+ GH+PI++ GGGT +IGDPS + + R+++  ++++ N+ +IK     F+ +  G 
Sbjct: 58  AWLQRAGHQPIAVAGGGTGLIGDPSGKTKERQLLTLEQVERNLSEIKKQIEHFLDFDCGA 117

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMIL 179
           + A ++NN +WL  +  I+ LR+ G +F+VN M++ + VRSR++  E+S+++ EF+Y++L
Sbjct: 118 SSAKIVNNYSWLSKLGLIEFLRDFGKYFTVNFMIARDYVRSRIEDPEKSITYTEFSYILL 177

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK 239
           QAYDF  L ++ +C LQMGG+DQ  NII GIDL  +    K + LT PLL TASG K GK
Sbjct: 178 QAYDFYHLYQHENCALQMGGNDQQVNIIAGIDLIRKKLGAKAYGLTYPLLLTASGQKFGK 237

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NE 297
           T  G +WL+   T+PY F+Q+W N DD DV  F K  T LP+ +I  +     +     E
Sbjct: 238 TEEGTVWLSPVRTTPYKFYQFWINADDRDVEKFLKLFTFLPIDDIKEVMSNHARHPERRE 297

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMS------------IHSQHMPTISISKDE 345
           A+KI+A EIT +VHG   A++    +   F  +               Q +P    S + 
Sbjct: 298 AQKILAGEITRVVHGDNAAKRVKKVSEILFGEAYTLEDLTLELLEEIRQEVP----SGNA 353

Query: 346 VSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLS 405
                 L+ ++V  G   S +EARR ++S  + +N   +  E  ++   +F     + L 
Sbjct: 354 KVIPSSLVDVLVHVGACASKSEARRLIRSGGVSLNGERVDEENYEVDSDNFLYGKYMLLK 413

Query: 406 FGKKNHIICH 415
            GKK + +  
Sbjct: 414 LGKKRYYLVE 423


>gi|52140461|ref|YP_086368.1| tyrosyl-tRNA synthetase [Bacillus cereus E33L]
 gi|81685533|sp|Q631P9|SYY2_BACCZ RecName: Full=Tyrosyl-tRNA synthetase 2; AltName:
           Full=Tyrosine--tRNA ligase 2; Short=TyrRS 2
 gi|51973930|gb|AAU15480.1| tyrosine--tRNA ligase (tyrosyl-tRNA synthetase) [Bacillus cereus
           E33L]
          Length = 419

 Score =  492 bits (1268), Expect = e-137,   Method: Composition-based stats.
 Identities = 149/424 (35%), Positives = 221/424 (52%), Gaps = 21/424 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG ++Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  
Sbjct: 2   NIIDELEWRGAVNQQTDEEGLRKLVEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P+ L+GG T  IGDPS R   R++   + +Q N++ +         +G G ++  M+
Sbjct: 62  GHHPVILIGGATGTIGDPSGRQSERQLQTLEVVQHNVDALTAQMKKLFDFG-GNSEVKMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I  I+ LR+ G  FS+N ML+ + V SRL  +  +SF EF Y ILQA DF  
Sbjct: 121 NNYDWTHEINIIEFLRDYGKNFSINSMLAKDIVASRL--DTGISFTEFTYQILQAMDFHH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKLFALTSPLLTTASGTKMGKTLSGA 244
           L K  D +LQ+GGSDQWGNI  G+DL  +L+    K+F LT PLL  + GTK GK+  GA
Sbjct: 179 LYKKEDVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSAGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA--KLQGKEINEAKKII 302
           +WL+ E T+P+ F+Q+W N DD DVV + K  T L    ID +A          EA+K++
Sbjct: 239 VWLDPEKTTPFEFYQFWVNTDDRDVVKYLKYFTFLTKERIDELAVKVETEPHKREAQKVL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGL 352
           A E+T  VHG E   +A       F   I S          + MPT   SK+       +
Sbjct: 299 AEEMTKFVHGEEALLQAVKITAALFSGDIKSLTADEIEQGFKEMPTFQSSKET----KNI 354

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           +  +V  G   S  +AR  + + AI +N   +++    + +++      I +  GKKN+ 
Sbjct: 355 VEWLVDLGIEPSRRQAREDINNGAISMNGEKVTDVGTDVTVENSFDGRFIIIRKGKKNYS 414

Query: 413 ICHL 416
           +  L
Sbjct: 415 LVKL 418


>gi|228923799|ref|ZP_04087077.1| Tyrosyl-tRNA synthetase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228835928|gb|EEM81291.1| Tyrosyl-tRNA synthetase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
          Length = 419

 Score =  492 bits (1268), Expect = e-137,   Method: Composition-based stats.
 Identities = 149/424 (35%), Positives = 220/424 (51%), Gaps = 21/424 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG ++Q ++   L  L     ++ Y G D T  S+H GHL   M++   Q  
Sbjct: 2   NIIDELEWRGAVNQQTDEEGLRKLVEGKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P+ L+GG T  IGDPS R   R++   + +Q N++ +         +G G ++  M+
Sbjct: 62  GHHPVILIGGATGTIGDPSGRQSERQLQTLEVVQHNVDALTAQMKKLFDFG-GNSEVKMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I  I+ LR+ G  FS+N ML+ + V SRL  +  +SF EF Y ILQA DF  
Sbjct: 121 NNYDWTHEINIIEFLRDYGKNFSINSMLAKDIVASRL--DTGISFTEFTYQILQAMDFHH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKLFALTSPLLTTASGTKMGKTLSGA 244
           L    D +LQ+GGSDQWGNI  G+DL  +L+    K+F LT PLL  + GTK GK+  GA
Sbjct: 179 LYTKEDVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSAGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKII 302
           +WL+ E T+P+ F+Q+W N DD DVV + K  T L    ID +A     E    EA+K++
Sbjct: 239 VWLDPEKTTPFEFYQFWVNTDDRDVVKYLKYFTFLTKERIDELAARVEAEPHKREAQKVL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGL 352
           A E+T  VHG E   +A       F   I S          + MPT   SK+       +
Sbjct: 299 AEEMTKFVHGEEAFLQAEKITAALFSGDIKSLTADEIEQGFKEMPTFQSSKET----KNI 354

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           +  +V  G   S  +AR  + + AI +N   +++    + +++      I +  GKKN+ 
Sbjct: 355 VEWLVDLGIEPSRRQAREDINNGAISMNGEKVTDVGTDVTVENSFDGRFIIIRKGKKNYS 414

Query: 413 ICHL 416
           +  L
Sbjct: 415 LVKL 418


>gi|30265113|ref|NP_847490.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. Ames]
 gi|47530623|ref|YP_021972.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49187924|ref|YP_031177.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|65317058|ref|ZP_00390017.1| COG0162: Tyrosyl-tRNA synthetase [Bacillus anthracis str. A2012]
 gi|165870040|ref|ZP_02214697.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|167636569|ref|ZP_02394864.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. A0442]
 gi|167641773|ref|ZP_02400015.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. A0193]
 gi|170689360|ref|ZP_02880553.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. A0465]
 gi|170709106|ref|ZP_02899534.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. A0389]
 gi|177655386|ref|ZP_02936884.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. A0174]
 gi|190569231|ref|ZP_03022127.1| tyrosyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I]
 gi|196032753|ref|ZP_03100166.1| tyrosyl-tRNA synthetase [Bacillus cereus W]
 gi|218906267|ref|YP_002454101.1| tyrosyl-tRNA synthetase [Bacillus cereus AH820]
 gi|227817844|ref|YP_002817853.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. CDC 684]
 gi|228917703|ref|ZP_04081244.1| Tyrosyl-tRNA synthetase [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
 gi|228930098|ref|ZP_04093108.1| Tyrosyl-tRNA synthetase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228936350|ref|ZP_04099148.1| Tyrosyl-tRNA synthetase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228948798|ref|ZP_04111074.1| Tyrosyl-tRNA synthetase [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|229124608|ref|ZP_04253793.1| Tyrosyl-tRNA synthetase [Bacillus cereus 95/8201]
 gi|229602713|ref|YP_002869306.1| tyrosine--tRNA ligase [Bacillus anthracis str. A0248]
 gi|254686485|ref|ZP_05150344.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. CNEVA-9066]
 gi|254724484|ref|ZP_05186268.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. A1055]
 gi|254735692|ref|ZP_05193399.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. Western North
           America USA6153]
 gi|254744222|ref|ZP_05201902.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. Kruger B]
 gi|254750984|ref|ZP_05203023.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. Vollum]
 gi|254756974|ref|ZP_05209002.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. Australia 94]
 gi|81583842|sp|Q81XC6|SYY2_BACAN RecName: Full=Tyrosyl-tRNA synthetase 2; AltName:
           Full=Tyrosine--tRNA ligase 2; Short=TyrRS 2
 gi|30259790|gb|AAP28976.1| tyrosine--tRNA ligase [Bacillus anthracis str. Ames]
 gi|47505771|gb|AAT34447.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49181851|gb|AAT57227.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|164714363|gb|EDR19883.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|167510256|gb|EDR85660.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. A0193]
 gi|167528042|gb|EDR90845.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. A0442]
 gi|170126008|gb|EDS94907.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. A0389]
 gi|170666656|gb|EDT17426.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. A0465]
 gi|172080137|gb|EDT65231.1| tyrosyl-tRNA synthetase [Bacillus anthracis str. A0174]
 gi|190559671|gb|EDV13660.1| tyrosyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I]
 gi|195994182|gb|EDX58137.1| tyrosyl-tRNA synthetase [Bacillus cereus W]
 gi|218538895|gb|ACK91293.1| tyrosyl-tRNA synthetase [Bacillus cereus AH820]
 gi|227006923|gb|ACP16666.1| tyrosine--tRNA ligase [Bacillus anthracis str. CDC 684]
 gi|228658948|gb|EEL14603.1| Tyrosyl-tRNA synthetase [Bacillus cereus 95/8201]
 gi|228810855|gb|EEM57200.1| Tyrosyl-tRNA synthetase [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|228823182|gb|EEM69016.1| Tyrosyl-tRNA synthetase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228829597|gb|EEM75224.1| Tyrosyl-tRNA synthetase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228841940|gb|EEM87046.1| Tyrosyl-tRNA synthetase [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
 gi|229267121|gb|ACQ48758.1| tyrosine--tRNA ligase [Bacillus anthracis str. A0248]
          Length = 419

 Score =  492 bits (1268), Expect = e-137,   Method: Composition-based stats.
 Identities = 148/424 (34%), Positives = 220/424 (51%), Gaps = 21/424 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG ++Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  
Sbjct: 2   NIIDELEWRGAVNQQTDEEGLRKLVEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P+ L+GG T  IGDPS R   R++   + +Q N++ +         +G G ++  M+
Sbjct: 62  GHHPVILIGGATGTIGDPSGRQSERQLQTLEVVQHNVDALTAQMKKLFDFG-GNSEVKMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I  I+ LR+ G  FS+N ML+ + V SRL  +  +SF EF Y ILQA DF  
Sbjct: 121 NNYDWTHEINIIEFLRDYGKNFSINSMLAKDIVASRL--DTGISFTEFTYQILQAMDFHH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKLFALTSPLLTTASGTKMGKTLSGA 244
           L    D +LQ+GGSDQWGNI  G+DL  +L+    K+F LT PLL  + GTK GK+  GA
Sbjct: 179 LYTKEDVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSAGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA--KLQGKEINEAKKII 302
           +WL+ E T+P+ F+Q+W N DD DVV + K  T L    ID +A          EA+K++
Sbjct: 239 VWLDPEKTTPFEFYQFWVNTDDRDVVKYLKYFTFLTKERIDELAVKVETEPHKREAQKVL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGL 352
           A E+T  VHG E   +A       F   I S          + MPT   SK+       +
Sbjct: 299 AEEMTKFVHGEEALLQAVKITAALFSGDIKSLTADEIEQGFKEMPTFQSSKET----KNI 354

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           +  +V  G   S  +AR  + + AI +N   +++    + +++      I +  GKKN+ 
Sbjct: 355 VEWLVDLGIEPSRRQAREDINNGAISMNGEKVTDVGTDVTVENSFDGRFIIIRKGKKNYS 414

Query: 413 ICHL 416
           +  L
Sbjct: 415 LVKL 418


>gi|301056559|ref|YP_003794770.1| tyrosyl-tRNA synthetase [Bacillus anthracis CI]
 gi|300378728|gb|ADK07632.1| tyrosyl-tRNA synthetase [Bacillus cereus biovar anthracis str. CI]
          Length = 419

 Score =  492 bits (1268), Expect = e-137,   Method: Composition-based stats.
 Identities = 145/420 (34%), Positives = 216/420 (51%), Gaps = 13/420 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG ++Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  
Sbjct: 2   NIIDELEWRGAVNQQTDEEGLRKLVEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P+ L+GG T  IGDPS R   R++   + +Q N++ +         +G G ++  M+
Sbjct: 62  GHHPVILIGGATGTIGDPSGRQSERQLQTLEVVQHNVDALTAQMKKLFDFG-GNSEVKMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I  I+ LR+ G  FS+N ML+ + V SRL  +  +SF EF Y ILQA DF  
Sbjct: 121 NNYDWTHEINIIEFLRDYGKNFSINSMLAKDIVASRL--DTGISFTEFTYQILQAMDFHH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKLFALTSPLLTTASGTKMGKTLSGA 244
           L    D +LQ+GGSDQWGNI  G+DL  +L+    K+F LT PLL  + GTK GK+  GA
Sbjct: 179 LYTKEDVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSAGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA--KLQGKEINEAKKII 302
           +WL+ E T+P+ F+Q+W N DD DVV + K  T L    ID +A          EA+K++
Sbjct: 239 VWLDPEKTTPFEFYQFWVNTDDRDVVKYLKYFTFLTKERIDELAVKVETEPHKREAQKVL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVS------RGMGLLTLI 356
           A E+T  VHG E   +A       F   I S     I     E+           ++  +
Sbjct: 299 AEEMTKFVHGEEALLQAVKITTALFSGDIKSLTADEIEQGFKEMPTFQSSKETKNIVEWL 358

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V  G   S  +AR  + + AI +N   +++    + +++      I +  GKKN+ +  L
Sbjct: 359 VDLGIEPSRRQAREDINNGAISMNGEKVTDVGTDVTVENSFDGRFIIIRKGKKNYSLVKL 418


>gi|217964249|ref|YP_002349927.1| tyrosyl-tRNA synthetase [Listeria monocytogenes HCC23]
 gi|290893192|ref|ZP_06556179.1| tyrosyl-tRNA synthetase [Listeria monocytogenes FSL J2-071]
 gi|254783615|sp|B8DHE4|SYY_LISMH RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|217333519|gb|ACK39313.1| tyrosyl-tRNA synthetase [Listeria monocytogenes HCC23]
 gi|290557174|gb|EFD90701.1| tyrosyl-tRNA synthetase [Listeria monocytogenes FSL J2-071]
 gi|307571183|emb|CAR84362.1| tyrS [Listeria monocytogenes L99]
          Length = 419

 Score =  492 bits (1267), Expect = e-137,   Method: Composition-based stats.
 Identities = 154/422 (36%), Positives = 218/422 (51%), Gaps = 21/422 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG I+Q ++   L     +  ++ Y G D +  S+H GHL   M+L   Q  
Sbjct: 2   NIIDELEWRGAIYQQTDEEGLRKWVDEKQISLYCGIDPSGDSMHIGHLIPFMILRRFQNA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI L+GG T  IGDPS + E R++   ++I +N+E ++        +  G + A M+
Sbjct: 62  GHRPIILVGGATGTIGDPSGKKEERKLQSMEQISKNVESLRVQLGKIFDF-EGDSAASMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   +  +D LR+ G  F+VN MLS + V SRL  E  +SF EF Y ILQA DF  
Sbjct: 121 NNYDWTKDVSILDFLRDYGKEFNVNTMLSKDIVASRL--EVGISFTEFAYQILQAMDFNH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSGA 244
           L +  DCRLQ+GGSDQWGNI  G+DL  + +    K F LT PLLT A GTK GK+  GA
Sbjct: 179 LYEFNDCRLQIGGSDQWGNITAGLDLIRKKQGENAKAFGLTIPLLTKADGTKFGKSEGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKII 302
           IWLN E T+PY F+Q+W N DD DVV + K  T L  +EID +AK       +  A+K +
Sbjct: 239 IWLNPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLTEAEIDELAKQVETEPHLRAAQKTL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGL 352
           A E+T  VH  E  E+A   +   F   + +          + +PT      E      L
Sbjct: 299 AAEMTKFVHSEEALEQALKISKALFSGDVKALTADEIEQGFKDVPTFVAEDSE----ANL 354

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           +  +V  G   S  +AR  + + AI IN     + +  +   D        +  GKK + 
Sbjct: 355 VDWLVTLGIEPSKRQAREDVGNGAIYINGERQQDLEKIMDASDRIENKFTIVRRGKKKYF 414

Query: 413 IC 414
           + 
Sbjct: 415 LV 416


>gi|289450632|ref|YP_003475585.1| tyrosine--tRNA ligase [Clostridiales genomosp. BVAB3 str. UPII9-5]
 gi|289185179|gb|ADC91604.1| tyrosine--tRNA ligase [Clostridiales genomosp. BVAB3 str. UPII9-5]
          Length = 424

 Score =  492 bits (1267), Expect = e-137,   Method: Composition-based stats.
 Identities = 178/409 (43%), Positives = 256/409 (62%), Gaps = 6/409 (1%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           +++   ILSERG+I Q ++P E+  L S+  VT YIG+D TA SLHAGH  Q+M++  +Q
Sbjct: 18  ETNIYDILSERGYIAQCTHPEEVRKLLSKPGVTFYIGFDPTADSLHAGHFIQVMIMAHMQ 77

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           K GH+PI+LMGGGT +IGDPS R + R+MM  + +Q N++ IK   S  I++G GK  A 
Sbjct: 78  KAGHRPIALMGGGTGMIGDPSGRSDLRKMMTRETVQHNVDCIKAQMSRLIEFGPGK--AT 135

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           + NN  WL ++ YID LRE G  FSVNRML+ E  + RL  E  L+FLEFNYM++QAYDF
Sbjct: 136 IANNADWLLNLNYIDFLREFGPCFSVNRMLTAECYKKRL--EVGLTFLEFNYMLMQAYDF 193

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
            +L ++ +CRL++GG DQW NI+ G DL  R    + + LT  LLTT+ G KMGKT +GA
Sbjct: 194 YKLHESMNCRLELGGDDQWSNILAGTDLIRRKTGEETYGLTFRLLTTSEGIKMGKTANGA 253

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WL+ +   P+ F+Q+WRNI DADV++  K +T + M EI    KL+G EIN AKK +A 
Sbjct: 254 LWLDPDKCPPFEFYQFWRNIADADVINCLKMVTFVSMDEIRAYEKLEGSEINTAKKRLAF 313

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E+T ++HG E A +    A+E F+    SQ M T  +   ++ +   +L  ++      S
Sbjct: 314 EVTKLIHGEEIAAQCQQQAIELFEGGGRSQSMETAELGSSDLGK-TTILDSLLAVKLIPS 372

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
             E RR ++ N + +N  +I++        DF + G   +  GKK +  
Sbjct: 373 KGEGRRLMQQNGLFLNEKVIADFSRTWCADDF-ANGEAIIRKGKKKYYR 420


>gi|229199218|ref|ZP_04325896.1| Tyrosyl-tRNA synthetase [Bacillus cereus m1293]
 gi|228584235|gb|EEK42375.1| Tyrosyl-tRNA synthetase [Bacillus cereus m1293]
          Length = 419

 Score =  492 bits (1267), Expect = e-137,   Method: Composition-based stats.
 Identities = 149/424 (35%), Positives = 220/424 (51%), Gaps = 21/424 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG I+Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  
Sbjct: 2   NIIDELEWRGAINQQTDEEGLRKLVEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P+ L+GG T  IGDPS R   R++   + +Q N++ +         +G G ++  M+
Sbjct: 62  GHHPVILIGGATGTIGDPSGRQSERQLQTLEVVQHNVDALTAQMKKLFDFG-GNSEVKMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I  I+ LR+ G  FS+N ML+ + V SRL  +  +SF EF Y ILQA DF  
Sbjct: 121 NNYDWTHEINIIEFLRDYGKNFSINSMLAKDIVASRL--DTGISFTEFTYQILQAMDFHH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKLFALTSPLLTTASGTKMGKTLSGA 244
           L    D +LQ+GGSDQWGNI  G+DL  +L+    K+F LT PLL  + GTK GK+  GA
Sbjct: 179 LYTKEDVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSAGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA--KLQGKEINEAKKII 302
           +WL+ E T+P+ F+Q+W N DD DVV + K  T L    ID +A          EA+K++
Sbjct: 239 VWLDPEKTTPFEFYQFWVNTDDRDVVKYLKYFTFLTKERIDELAVKVETEPHKREAQKVL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGL 352
           A E+T  VHG E   +A       F   I S          + MPT   SK+       +
Sbjct: 299 AEEMTKFVHGEEAFLQAVKITAALFSGDIKSLTADEIEQGFKEMPTFQSSKET----KNI 354

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           +  +V  G   S  +AR  + + AI +N   +++    + +++      I +  GKKN+ 
Sbjct: 355 VEWLVDLGIEPSRRQAREDINNGAISMNGEKVTDVGTDVTVENSFDGRFIIIRKGKKNYS 414

Query: 413 ICHL 416
           +  L
Sbjct: 415 LVKL 418


>gi|46907828|ref|YP_014217.1| tyrosyl-tRNA synthetase [Listeria monocytogenes serotype 4b str.
           F2365]
 gi|47093460|ref|ZP_00231224.1| tyrosyl-tRNA synthetase [Listeria monocytogenes str. 4b H7858]
 gi|254931537|ref|ZP_05264896.1| tyrosyl-tRNA synthetase [Listeria monocytogenes HPB2262]
 gi|254993889|ref|ZP_05276079.1| tyrosyl-tRNA synthetase [Listeria monocytogenes FSL J2-064]
 gi|81403260|sp|Q71Z70|SYY_LISMF RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|46881097|gb|AAT04394.1| tyrosyl-tRNA synthetase [Listeria monocytogenes serotype 4b str.
           F2365]
 gi|47018188|gb|EAL08957.1| tyrosyl-tRNA synthetase [Listeria monocytogenes str. 4b H7858]
 gi|293583092|gb|EFF95124.1| tyrosyl-tRNA synthetase [Listeria monocytogenes HPB2262]
 gi|328464964|gb|EGF36243.1| tyrosyl-tRNA synthetase [Listeria monocytogenes 1816]
          Length = 419

 Score =  492 bits (1267), Expect = e-137,   Method: Composition-based stats.
 Identities = 154/422 (36%), Positives = 218/422 (51%), Gaps = 21/422 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG I+Q ++   L     +  ++ Y G D +  S+H GHL   M+L   Q  
Sbjct: 2   NIIDELEWRGAIYQQTDEEGLRKWVEEKQISLYCGIDPSGDSMHIGHLIPFMILRRFQNA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI L+GG T  IGDPS + E R++   ++I +N+E ++        +  G + A M+
Sbjct: 62  GHRPIILVGGATGTIGDPSGKKEERKLQSMEQISKNVESLRVQLGKIFDF-EGNSAASMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   +  +D LR+ G  F+VN MLS + V SRL  E  +SF EF Y ILQA DF  
Sbjct: 121 NNYDWTKDVSILDFLRDYGKEFNVNTMLSKDIVASRL--EVGISFTEFAYQILQAMDFNH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSGA 244
           L +  DCRLQ+GGSDQWGNI  G+DL  + +    K F LT PLLT A GTK GK+  GA
Sbjct: 179 LYEFNDCRLQIGGSDQWGNITAGLDLIRKKQGENAKAFGLTIPLLTKADGTKFGKSEGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKII 302
           IWLN E T+PY F+Q+W N DD DVV + K  T L  +EID +AK       +  A+K +
Sbjct: 239 IWLNPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLTEAEIDELAKQVETEPHLRAAQKTL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGL 352
           A E+T  VH  E  E+A   +   F   + +          + +PT      E      L
Sbjct: 299 AAEMTKFVHSEEALEQALKISKALFSGDVKALTADEIEQGFKDVPTFVAEDTE----ANL 354

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           +  +V  G   S  +AR  + + AI IN     + +  +   D        +  GKK + 
Sbjct: 355 VDWLVTLGIEPSKRQAREDVANGAIYINGERQQDLEKIMDASDRIENKFTIVRRGKKKYF 414

Query: 413 IC 414
           + 
Sbjct: 415 LV 416


>gi|206970458|ref|ZP_03231411.1| tyrosyl-tRNA synthetase [Bacillus cereus AH1134]
 gi|229082314|ref|ZP_04214777.1| Tyrosyl-tRNA synthetase [Bacillus cereus Rock4-2]
 gi|206735035|gb|EDZ52204.1| tyrosyl-tRNA synthetase [Bacillus cereus AH1134]
 gi|228700746|gb|EEL53269.1| Tyrosyl-tRNA synthetase [Bacillus cereus Rock4-2]
          Length = 419

 Score =  492 bits (1267), Expect = e-137,   Method: Composition-based stats.
 Identities = 147/424 (34%), Positives = 220/424 (51%), Gaps = 21/424 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG ++Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  
Sbjct: 2   NIIDELEWRGAVNQQTDEEGLRKLVEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P+ L+GG T  IGDPS R   R++   + +Q N++ +         +G G ++  M+
Sbjct: 62  GHHPVILIGGATGTIGDPSGRQSERQLQTLEVVQHNVDALTAQMKKLFDFG-GNSEVKMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I  I+ LR+ G  FS+N ML+ + V SRL  +  +SF EF Y ILQA DF  
Sbjct: 121 NNYDWTHEINIIEFLRDYGKNFSINSMLAKDIVASRL--DTGISFTEFTYQILQAMDFHH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKLFALTSPLLTTASGTKMGKTLSGA 244
           L    D +LQ+GGSDQWGNI  G+DL  +L+    K+F LT PLL  + GTK GK+  GA
Sbjct: 179 LYTKEDVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSAGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKII 302
           +WL+ E T+P+ F+Q+W N DD DV+ + K  T L    ID +A          EA+K++
Sbjct: 239 VWLDPEKTTPFEFYQFWVNTDDRDVIKYLKYFTFLTKERIDELAAKVETEPHKREAQKVL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGL 352
           A E+T  VHG E   +A       F   I S          + MPT   SK+       +
Sbjct: 299 AEEMTKFVHGEEAFLQAEKITAALFSGDIKSLTADEIEQGFKEMPTFQSSKET----KNI 354

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           +  +V  G   S  +AR  + + AI +N   +++    + +++      I +  GKKN+ 
Sbjct: 355 VEWLVDLGIEPSRRQAREDINNGAISMNGEKVTDVGTDVTVENSFDGRFIIIRKGKKNYS 414

Query: 413 ICHL 416
           +  L
Sbjct: 415 LVKL 418


>gi|58584506|ref|YP_198079.1| tyrosyl-tRNA synthetase [Wolbachia endosymbiont strain TRS of
           Brugia malayi]
 gi|75497988|sp|Q5GT37|SYY_WOLTR RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|58418822|gb|AAW70837.1| Tyrosyl-tRNA synthetase [Wolbachia endosymbiont strain TRS of
           Brugia malayi]
          Length = 416

 Score =  492 bits (1267), Expect = e-137,   Method: Composition-based stats.
 Identities = 205/415 (49%), Positives = 283/415 (68%), Gaps = 2/415 (0%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILC-SQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
            KS+FL+ + ERG++ Q +N   LD L      V AYIG+D TASSLH G L Q+M+L  
Sbjct: 3   HKSEFLNFIQERGYLCQCTNIEGLDQLLLQNNYVVAYIGFDCTASSLHVGSLIQIMMLRH 62

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD 122
           LQK G+KPI L+GG T+ IGDPS +D++R ++  ++I +NI  IK      + +  GK  
Sbjct: 63  LQKFGYKPIVLLGGSTTKIGDPSGKDKARSVLPIEDINQNISGIKKALKKMVYFNDGKAG 122

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
           A+++NN  WL SIKYID LR+IG+ FSVNRMLSF+S ++RL REQ+LSFLEFNYM+LQAY
Sbjct: 123 AIIVNNADWLDSIKYIDFLRDIGAHFSVNRMLSFDSAKTRLDREQNLSFLEFNYMLLQAY 182

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DF EL K Y CRLQ+GGSDQWGNI+ GI+LG++L  P+LF LT+PLL +A G KMGKT S
Sbjct: 183 DFAELNKKYGCRLQIGGSDQWGNIVNGIELGKKLNLPELFGLTTPLLLSAQGKKMGKTES 242

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKII 302
           G +WL+ +M  PY++WQY+RNIDD D+  F +  T LP+ EI ++  L+ +EINEAKK +
Sbjct: 243 GTVWLDGDMLKPYDYWQYFRNIDDQDIGRFLRFFTDLPIDEIKKLESLKNQEINEAKKAL 302

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFA 362
           ATE+T + HG +EAE A ++A+  F+    S  +P  +I+K +V+ G+ L+ L+   G  
Sbjct: 303 ATEVTKICHGDKEAELAQSSAVSVFENGDSSL-LPDYTITKKQVANGISLIDLLHDIGLE 361

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            S   A+R ++ N  K+N+  I++    I  + F     IKLS GKK HI   + 
Sbjct: 362 PSKGAAKRLIQGNGCKVNDYTINDINYIINSKSFKDQSFIKLSAGKKRHIKVMVS 416


>gi|322410926|gb|EFY01834.1| tyrosyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           dysgalactiae ATCC 27957]
          Length = 419

 Score =  492 bits (1267), Expect = e-137,   Method: Composition-based stats.
 Identities = 143/419 (34%), Positives = 224/419 (53%), Gaps = 11/419 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L  RG + Q ++   L    ++G V+ Y GYD TA SLH GHL  ++    LQ  
Sbjct: 2   NIFEELKARGLVFQTTDEEALVKALTEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP +L+GG T +IGDPSF+D  R +   + + E  +KIKG  S+F+ +  G   A ++
Sbjct: 62  GHKPYALVGGATGLIGDPSFKDAERSLQTKETVLEWSDKIKGQLSTFLDFENGDNKAELV 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I +ID LR++G +F+VN M+S +SV+ R+  E  +S+ EF Y I+Q YDF E
Sbjct: 122 NNYDWFSQISFIDFLRDVGKYFTVNYMMSKDSVKKRI--ETGISYTEFAYQIMQGYDFYE 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L   ++  LQ+GGSDQWGN+  G +L  R        +T PL+T ++G K GK+   A+W
Sbjct: 180 LNNKHNITLQIGGSDQWGNMTAGTELLRRKADKTCHVMTVPLITDSTGKKFGKSEGNAVW 239

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIAT 304
           L+ + TSPY  +Q+W N+ D D V F K  T L ++EI  +        +E  A+K +A 
Sbjct: 240 LDADKTSPYEMYQFWLNVMDDDAVRFLKIFTFLSLNEIADIENQFNAARHERLAQKTLAR 299

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIH-------SQHMPTISISKDEVSRGMGLLTLIV 357
           E+ T+VHG E  ++A     + F  ++         Q +  +     + +  + L+ ++V
Sbjct: 300 EVVTLVHGEEAYKQALNITEQLFAGNVQNLSANELKQGLSNVPNYHVQSADSLNLVDMLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            AG + S  +AR  +++ AI IN   +      +   D        +  GKK + +   
Sbjct: 360 TAGISPSKRQAREDVQNGAIYINGERVQELDYTLSDTDKIDNQLTVVRRGKKKYAVLKF 418


>gi|325299419|ref|YP_004259336.1| Tyrosyl-tRNA synthetase [Bacteroides salanitronis DSM 18170]
 gi|324318972|gb|ADY36863.1| Tyrosyl-tRNA synthetase [Bacteroides salanitronis DSM 18170]
          Length = 430

 Score =  492 bits (1267), Expect = e-137,   Method: Composition-based stats.
 Identities = 147/428 (34%), Positives = 223/428 (52%), Gaps = 22/428 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG +H +    E   L  + +VTAY+G D TA SLH GHL  +M+L   Q+ 
Sbjct: 2   NFVEELKWRGMVHNMMPGTE--ELLEKEMVTAYLGIDPTADSLHIGHLCGVMMLRHFQRC 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG-TGKTDALM 125
           GHKP++L+GG T +IGDPS + + R ++  + ++ N E IK     F+ +       A +
Sbjct: 60  GHKPLALVGGATGMIGDPSGKSQERNLLDEETLRHNQECIKKQLGKFLDFESDAPNRAEL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQAYD 183
           +NN  W+    ++D  R +G   +VN M++ +SV+ RL  E    LSF EF Y +LQ YD
Sbjct: 120 VNNYDWMKDFTFLDFARTVGKHITVNYMMAKDSVQKRLNGEARDGLSFTEFTYQLLQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ L +   C+LQ+GGSDQWGNI  G +L  R    ++FALT PL+T A GTK GKT SG
Sbjct: 180 FLHLYETRGCKLQLGGSDQWGNITTGAELIRRTNGGEVFALTCPLVTKADGTKFGKTESG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKKI 301
            +WL+   TSPY F+Q+W N+ D D   + K  T+L   EID +         +   +K 
Sbjct: 240 NVWLDARYTSPYKFYQFWLNVSDEDAERYIKIFTSLTKEEIDALIAEHKEAPHLRVLQKR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDEVS 347
           +A E+T MVH  E+   A  A+   F  +                 + +P   ++K E+ 
Sbjct: 300 LAREVTVMVHSEEDYNAAVEASGILFGNATSDALKRLDEDTLLSVFEGVPQFEVAKSEIE 359

Query: 348 RGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+  + L V+ A    S  E R+  +   + +N   ++     I   D      + +  
Sbjct: 360 AGIKAVDLFVEKAAIFPSKGEMRKMTQGGGVSLNKEKLTAFDQVITADDLLDEKYLLVQR 419

Query: 407 GKKNHIIC 414
           GKKN+ + 
Sbjct: 420 GKKNYYLI 427


>gi|154498035|ref|ZP_02036413.1| hypothetical protein BACCAP_02016 [Bacteroides capillosus ATCC
           29799]
 gi|150273025|gb|EDN00182.1| hypothetical protein BACCAP_02016 [Bacteroides capillosus ATCC
           29799]
          Length = 408

 Score =  492 bits (1267), Expect = e-137,   Method: Composition-based stats.
 Identities = 178/410 (43%), Positives = 248/410 (60%), Gaps = 6/410 (1%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG + Q+++  E+  L + G  T YIG+D TA SLH GH   LML+  LQK G
Sbjct: 3   IYDELKARGLVAQVTDEEEIKELINNGKATFYIGFDPTADSLHVGHFMALMLMRRLQKAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           ++PI+L+GGGT ++GDPS R + R MM  + IQ N E  K   S FI +  GK  ALMLN
Sbjct: 63  NRPIALIGGGTGMVGDPSGRTDMRSMMTVETIQHNCECFKKQMSKFIDFSEGK--ALMLN 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  + Y++LLRE+G+ FSVN ML  E  + R+  E+ LSFLEFNYMI+Q+YDF  +
Sbjct: 121 NADWLMKLNYVELLREVGACFSVNNMLRAECYKQRM--EKGLSFLEFNYMIMQSYDFYHM 178

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            +   C LQ GG DQW N++ G +L  R      +A+T  LL T+ G KMGKT  GA+WL
Sbjct: 179 FQTIGCNLQCGGDDQWSNMLGGTELIRRKLGKDAYAMTITLLLTSEGKKMGKTQKGAVWL 238

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           + E T+PY F+QYWRNI DADV+   + LT LP+ +ID M K +G ++N AK+I+A E+T
Sbjct: 239 DPEKTTPYEFYQYWRNIGDADVLKCLRMLTDLPLEQIDEMDKWEGAQLNTAKEILAYELT 298

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTN 366
            +VH  EEA KA  AA   F       +MPT +++ D+++ G + +L L++K G   S  
Sbjct: 299 KLVHSEEEAMKAQDAARALFSQGGDKANMPTTTLTADDLTDGAVAVLDLMLKCGLVPSKK 358

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           EARR ++   ++ +   I++        +    G I L  GKK +    L
Sbjct: 359 EARRLVEQGGVEADGVKITDITRTFTADELSGEG-IILKKGKKVYHRALL 407


>gi|228955333|ref|ZP_04117341.1| Tyrosyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|228804466|gb|EEM51077.1| Tyrosyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
          Length = 419

 Score =  492 bits (1267), Expect = e-137,   Method: Composition-based stats.
 Identities = 147/424 (34%), Positives = 220/424 (51%), Gaps = 21/424 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG ++Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  
Sbjct: 2   NIIDELEWRGAVNQQTDEEGLRKLVEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P+ L+GG T  IGDPS R   R++   + +Q N++ +         +G G ++  M+
Sbjct: 62  GHHPVILIGGATGTIGDPSGRQSERQLQTLEVVQHNVDALTAQMKKLFDFG-GNSEVKMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I  I+ LR+ G  FS+N ML+ + V SRL  +  +SF EF Y ILQA DF  
Sbjct: 121 NNYDWTHEINIIEFLRDYGKNFSINSMLAKDIVASRL--DTGISFTEFTYQILQAMDFHH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKLFALTSPLLTTASGTKMGKTLSGA 244
           L    D +LQ+GGSDQWGNI  G+DL  +L+    K+F LT PLL  + GTK GK+  GA
Sbjct: 179 LYTKEDVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSAGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKII 302
           +WL+ E T+P+ F+Q+W N DD DV+ + K  T L    ID +A          EA+K++
Sbjct: 239 VWLDPEKTTPFEFYQFWVNTDDRDVIKYLKYFTFLTKERIDELATKVETEPHKREAQKVL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGL 352
           A E+T  VHG E   +A       F   I S          + MPT   SK+       +
Sbjct: 299 AEEMTKFVHGEEAFLQAEKITAALFSGDIKSLTADEIEQGFKEMPTFQSSKET----KNI 354

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           +  +V  G   S  +AR  + + AI +N   +++    + +++      I +  GKKN+ 
Sbjct: 355 VEWLVDLGIEPSRRQAREDINNGAISMNGEKVTDVGTDVTVENSFDGRFIIIRKGKKNYS 414

Query: 413 ICHL 416
           +  L
Sbjct: 415 LVKL 418


>gi|314933882|ref|ZP_07841247.1| tyrosine--tRNA ligase [Staphylococcus caprae C87]
 gi|313654032|gb|EFS17789.1| tyrosine--tRNA ligase [Staphylococcus caprae C87]
          Length = 420

 Score =  492 bits (1267), Expect = e-137,   Method: Composition-based stats.
 Identities = 149/421 (35%), Positives = 227/421 (53%), Gaps = 20/421 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            +  L  RG I+Q ++ + ++ L ++  VT Y G D TA SLH GHL   + L   Q+ G
Sbjct: 5   LIEDLKWRGLIYQQTDEQGIEDLLNKEQVTLYCGADPTADSLHIGHLLPFLTLRRFQEHG 64

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+PI L+GGGT +IGDPS + E R +   ++++ N++ +        ++GT K  A+++N
Sbjct: 65  HRPIVLIGGGTGMIGDPSGKSEERVLQTEEQVEANVQGLSKQMHRLFEFGTDKG-AVLVN 123

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N+ WL  I  I  LR+ G    VN ML  +S+++RL  E  +S+ EF Y ILQA DF  L
Sbjct: 124 NKDWLGQISLISFLRDYGKHVGVNYMLGKDSIQTRL--EHGISYTEFTYTILQAIDFGHL 181

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLG-ERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
            +  +C++Q+GGSDQWGNI  GI+L        + F LT PL+T + G K GK+ SGA+W
Sbjct: 182 NRELNCKIQVGGSDQWGNITSGIELMRRMYGQTEAFGLTIPLVTKSDGKKFGKSESGAVW 241

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA--KLQGKEINEAKKIIAT 304
           L+ E TSPY F+Q+W N  D DV+ F K  T L   EIDR+   K +   + EA+K +A 
Sbjct: 242 LDPEKTSPYEFYQFWINQSDEDVIKFLKYFTFLDKEEIDRLEQSKEEAPHLREAQKALAE 301

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQ----------HMPTISISKDEVSRGMGLLT 354
            +T  +HG E    A   +   F   + S            +P +S+S    S    ++ 
Sbjct: 302 NVTKFIHGEEALNDAIRISKALFSGDLKSLTGKELKEGFIDVPQVSLS----SETTNIIE 357

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +++ G ATS  +AR  + + AI IN     +   ++   D        +  GKK + + 
Sbjct: 358 ALIETGIATSKRQAREDVNNGAIYINGERQQSVDYELSNDDKIDNEFTIIRRGKKKYFMV 417

Query: 415 H 415
           +
Sbjct: 418 N 418


>gi|329117271|ref|ZP_08245988.1| tyrosine--tRNA ligase [Streptococcus parauberis NCFD 2020]
 gi|326907676|gb|EGE54590.1| tyrosine--tRNA ligase [Streptococcus parauberis NCFD 2020]
          Length = 418

 Score =  492 bits (1266), Expect = e-137,   Method: Composition-based stats.
 Identities = 147/420 (35%), Positives = 228/420 (54%), Gaps = 17/420 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L  RG + Q ++   L    ++G V+ Y GYD TA SLH GHL  ++    LQ  
Sbjct: 2   NIFEELKARGLVFQTTDEEALVKALTEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP +L+GG T +IGDPSF+D  R +   + + E  +KIKG  S+F+ +  G   A ++
Sbjct: 62  GHKPYALVGGATGLIGDPSFKDAERSLQTKETVLEWSDKIKGQLSNFLDFENGDNKAELV 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I +ID LR++G +F+VN M+S +SV+ R+  E  +S+ EF Y I+Q YDF E
Sbjct: 122 NNYDWFSQISFIDFLRDVGKYFTVNYMMSKDSVKKRI--ETGISYTEFAYQIMQGYDFYE 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L   ++  LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   AIW
Sbjct: 180 LNAKHNVTLQIGGSDQWGNMTAGTELLRRKSDKTGHVMTVPLITDATGKKFGKSEGNAIW 239

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIAT 304
           L+ + TSPY  +Q+W N+ D D V F K  T L + EI+ + K      +E  A+K +A 
Sbjct: 240 LDADKTSPYEMYQFWLNVMDDDAVRFLKIFTFLSLDEINAIEKTFDAARHERLAQKTLAC 299

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLT 354
           E+ T+VHG+   ++A     + F  +I             ++P   +S       M ++ 
Sbjct: 300 EVVTLVHGKAAYDQAVKITEQLFAGNIKELSASELKQGLSNVPNYHVSS---EANMNIVE 356

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           ++V AG + S  +AR  + + AI +N   + +   Q++ +D        +  GKK + + 
Sbjct: 357 MLVTAGISPSKRQAREDVSNGAIYVNGERLQDLDYQLQDEDKIDGQLTVIRRGKKKYAVL 416


>gi|324998013|ref|ZP_08119125.1| tyrosyl-tRNA synthetase [Pseudonocardia sp. P1]
          Length = 426

 Score =  492 bits (1266), Expect = e-137,   Method: Composition-based stats.
 Identities = 150/428 (35%), Positives = 230/428 (53%), Gaps = 12/428 (2%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPREL-DILCSQGVVTAYIGYDLTASSLHAGHLTQLML 59
           M    +D L  L  RG I Q ++   L   L     +T Y G+D TA SLHAGHL  ++ 
Sbjct: 1   MGGVGTDILDELEWRGLIAQSTDRDALAKELAGDEPITLYAGFDPTAPSLHAGHLVPMLT 60

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG 119
           L   Q+ GH+P+ L GG T +IGDP    E R +     + E    I+G    F+ +   
Sbjct: 61  LRRFQEAGHRPVILAGGATGMIGDPRDVGE-RTLNDEATVAEWTGLIRGQLERFVTFDDS 119

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
            T AL +NN  W      ++ LR++G  F VN ML+ E+V+ RL   + +S+ EF+Y++L
Sbjct: 120 PTGALAVNNLDWTGQQTVLEFLRDLGKHFPVNTMLARETVKRRLA-GEGMSYTEFSYLLL 178

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK 239
           Q+ D++ L +   CRLQ+GGSDQWGNI+ G+DL  R++   + A+T PL+T + G K GK
Sbjct: 179 QSQDYLHLYRELGCRLQIGGSDQWGNIVGGVDLIRRIEGASVHAMTLPLVTDSEGRKFGK 238

Query: 240 T-LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEIN 296
           +   G IWL+ + TSPY ++QY+ N+ DADV+ + K LT L   EID +A        + 
Sbjct: 239 STGGGNIWLDPDRTSPYAWYQYFVNVADADVIGYLKLLTFLDREEIDVLATELTDAPHLR 298

Query: 297 EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQ------HMPTISISKDEVSRGM 350
            A++ +ATE+TTMVHG E+  +  TA+   F  +  S+            +   +     
Sbjct: 299 SAQRRLATELTTMVHGEEQTRQVTTASQALFGRADLSELDAGTLAAALAEVPTADTGGSD 358

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            ++ L+V  G   S   ARR +K     +NN  +++E+   + +D  + G + +  GK+N
Sbjct: 359 TIVDLLVSTGLTDSRGAARRAVKEGGAYVNNVKVTDEEWVPRAEDALAGGWLVVRRGKRN 418

Query: 411 HIICHLCG 418
                L G
Sbjct: 419 LAGARLAG 426


>gi|228961312|ref|ZP_04122929.1| Tyrosyl-tRNA synthetase [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|228798365|gb|EEM45361.1| Tyrosyl-tRNA synthetase [Bacillus thuringiensis serovar pakistani
           str. T13001]
          Length = 420

 Score =  492 bits (1266), Expect = e-137,   Method: Composition-based stats.
 Identities = 148/424 (34%), Positives = 220/424 (51%), Gaps = 21/424 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG ++Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  
Sbjct: 2   NIIDELEWRGAVNQQTDEEGLRKLVEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P+ L+GG T  IGDPS R   R++   + +Q N++ +         +G G ++  M+
Sbjct: 62  GHHPVILIGGATGTIGDPSGRQSERQLQTLEVVQHNVDALTAQMKKLFDFG-GNSEVKMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I  I+ LR+ G  FS+N ML+ + V SRL  +  +SF EF Y ILQA DF  
Sbjct: 121 NNYDWTHEINIIEFLRDYGKNFSINSMLAKDIVASRL--DTGISFTEFTYQILQAMDFHH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKLFALTSPLLTTASGTKMGKTLSGA 244
           L    D +LQ+GGSDQWGNI  G+DL  +L+    K+F LT PLL  + GTK GK+  GA
Sbjct: 179 LYTKEDVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSAGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA--KLQGKEINEAKKII 302
           +WL+ E T+P+ F+Q+W N DD DVV + K  T L    ID +A          EA+K++
Sbjct: 239 VWLDPEKTTPFEFYQFWVNTDDRDVVKYLKYFTFLTKERIDELAVKVETEPHKREAQKVL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGL 352
           A E+T  VHG E   +A       F   I S          + MPT   SK+       +
Sbjct: 299 AEEMTKFVHGEEAFLQAEKITAALFSGDIKSLTADEIEQGFKEMPTFQSSKET----KNI 354

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           +  +V  G   S  +AR  + + AI +N   +++    + +++      I +  GKKN+ 
Sbjct: 355 VEWLVDLGIEPSRRQAREDINNGAISMNGEKVTDVGTDVTVENSFDGRFIIIRKGKKNYS 414

Query: 413 ICHL 416
           +  L
Sbjct: 415 LVKL 418


>gi|219666306|ref|YP_002456741.1| tyrosyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2]
 gi|259516975|sp|B8G0N6|SYY_DESHD RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|219536566|gb|ACL18305.1| tyrosyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2]
          Length = 420

 Score =  492 bits (1266), Expect = e-137,   Method: Composition-based stats.
 Identities = 155/422 (36%), Positives = 233/422 (55%), Gaps = 14/422 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + L  L  RG ++Q ++   L     +  +T Y G+D TA SLH GHL  +++L   Q  
Sbjct: 2   NILDDLKARGLVYQTTDEEALYKRL-ESPMTLYCGFDPTADSLHIGHLLPVLMLRRFQLA 60

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH PI+L+GGGT +IGDPS +   R +  ++ +QE   +IK   S F+ +      A+M 
Sbjct: 61  GHCPIALVGGGTGLIGDPSGKTSERTLNPTEVVQEWANRIKEQLSCFLDFEGVGNPAIMA 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL +I  I+ LR+IG  FS+  ML+ ESV SR+ R   +SF EF+Y ILQ+YDF++
Sbjct: 121 NNYEWLGTINVIEFLRDIGKNFSLGSMLAKESVESRMSR--GISFTEFSYQILQSYDFLK 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERL---KTPKLFALTSPLLTTASGTKMGKTLSG 243
           L + Y C +Q+GGSDQWGNI  G DL  R+   +  ++  LT PL+T + GTK GKT  G
Sbjct: 179 LNELYGCEMQIGGSDQWGNITSGTDLIRRMSVGEDRQVHGLTVPLVTKSDGTKFGKTEGG 238

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKI 301
           A+WL+ + TSPY F+Q+W N DD DVV +    T L + EI           E   A+++
Sbjct: 239 AVWLDPDKTSPYKFYQFWINTDDRDVVKYLNFFTFLSIEEIQGLAQEVESQPEKRNAQRM 298

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS-----ISKDEVSR-GMGLLTL 355
           +A E+T +VHG E  E+A   +   F   I +     +      +   +V    M L+  
Sbjct: 299 LAKEVTELVHGVEARERAEKISQALFTGGIANLTAKEVEEGFSDVPSADVEDQEMLLVDA 358

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           ++K G  +S  +AR  ++S A+ +N    ++  L +   D   +  I +  GKKN+ +  
Sbjct: 359 LIKVGAVSSRRQARESMESGAVYVNGIRQTDTTLTVAQLDKIESRFIVIRRGKKNYYLVK 418

Query: 416 LC 417
           L 
Sbjct: 419 LV 420


>gi|254828168|ref|ZP_05232855.1| tyrosyl-tRNA synthetase [Listeria monocytogenes FSL N3-165]
 gi|254898234|ref|ZP_05258158.1| tyrosyl-tRNA synthetase [Listeria monocytogenes J0161]
 gi|254912273|ref|ZP_05262285.1| tyrosyl-tRNA synthetase [Listeria monocytogenes J2818]
 gi|254936600|ref|ZP_05268297.1| tyrosyl-tRNA synthetase [Listeria monocytogenes F6900]
 gi|258600555|gb|EEW13880.1| tyrosyl-tRNA synthetase [Listeria monocytogenes FSL N3-165]
 gi|258609197|gb|EEW21805.1| tyrosyl-tRNA synthetase [Listeria monocytogenes F6900]
 gi|293590252|gb|EFF98586.1| tyrosyl-tRNA synthetase [Listeria monocytogenes J2818]
          Length = 419

 Score =  492 bits (1266), Expect = e-137,   Method: Composition-based stats.
 Identities = 154/422 (36%), Positives = 218/422 (51%), Gaps = 21/422 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG I+Q ++   L     +  ++ Y G D +  S+H GHL   M+L   Q  
Sbjct: 2   NIIDELEWRGAIYQQTDEEGLRKWVDEKQISLYCGIDPSGDSMHIGHLIPFMILRRFQNA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI L+GG T  IGDPS + E R++   ++I +N+E ++        +  G + A M+
Sbjct: 62  GHRPIILVGGATGTIGDPSGKKEERQLQSMEQISKNVESLRVQLGKIFDF-EGDSAASMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   +  +D LR+ G  F+VN MLS + V SRL  E  +SF EF Y ILQA DF  
Sbjct: 121 NNYDWTKDVSILDFLRDYGKEFNVNTMLSKDIVASRL--EVGISFTEFAYQILQAMDFNH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSGA 244
           L +  DCRLQ+GGSDQWGNI  G+DL  + +    K F LT PLLT A GTK GK+  GA
Sbjct: 179 LYEFNDCRLQIGGSDQWGNITAGLDLIRKKQGENAKAFGLTIPLLTKADGTKFGKSEGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKII 302
           IWLN E T+PY F+Q+W N DD DVV + K  T L  +EID +AK       +  A+K +
Sbjct: 239 IWLNPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLTEAEIDELAKQVETEPHLRAAQKTL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGL 352
           A E+T  VH  E  E+A   +   F   + +          + +PT      E      L
Sbjct: 299 AAEMTKFVHSEEALEQALKISKALFSGDVKALTADEIEQGFKDVPTFVAEDSE----ANL 354

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           +  +V  G   S  +AR  + + AI IN     + +  +   D        +  GKK + 
Sbjct: 355 VDWLVTLGIEPSKRQAREDVGNGAIYINGERQQDLEKIMDASDRIENKFTIVRRGKKKYF 414

Query: 413 IC 414
           + 
Sbjct: 415 LV 416


>gi|255026892|ref|ZP_05298878.1| tyrosyl-tRNA synthetase [Listeria monocytogenes FSL J2-003]
          Length = 419

 Score =  492 bits (1266), Expect = e-137,   Method: Composition-based stats.
 Identities = 154/422 (36%), Positives = 218/422 (51%), Gaps = 21/422 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG I+Q ++   L     +  ++ Y G D +  S+H GHL   M+L   Q  
Sbjct: 2   NIIDELEWRGAIYQQTDEEGLRKWVDEKQISLYCGIDPSGDSMHIGHLIPFMILRRFQNA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI L+GG T  IGDPS + E R++   ++I +N+E ++        +  G + A M+
Sbjct: 62  GHRPIILVGGATGTIGDPSGKKEERQLQSMEQISKNVESLRVQLGKIFDF-EGNSAASMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   +  +D LR+ G  F+VN MLS + V SRL  E  +SF EF Y ILQA DF  
Sbjct: 121 NNYDWTKDVSILDFLRDYGKEFNVNTMLSKDIVASRL--EVGISFTEFAYQILQAMDFNH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSGA 244
           L +  DCRLQ+GGSDQWGNI  G+DL  + +    K F LT PLLT A GTK GK+  GA
Sbjct: 179 LYEFNDCRLQIGGSDQWGNITAGLDLIRKKQGENAKAFGLTIPLLTKADGTKFGKSEGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKII 302
           IWLN E T+PY F+Q+W N DD DVV + K  T L  +EID +AK       +  A+K +
Sbjct: 239 IWLNPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLTEAEIDELAKQVETEPHLRAAQKTL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGL 352
           A E+T  VH  E  E+A   +   F   + +          + +PT      E      L
Sbjct: 299 AAEMTKFVHSEEALEQALKISKALFSGDVKALTADEIEQGFKDVPTFVAEDSE----ANL 354

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           +  +V  G   S  +AR  + + AI IN     + +  +   D        +  GKK + 
Sbjct: 355 VDWLVTLGIEPSKRQAREDVGNGAIYINGERQQDLEKIMDASDRIENKFTIVRRGKKKYF 414

Query: 413 IC 414
           + 
Sbjct: 415 LV 416


>gi|49481095|ref|YP_039086.1| tyrosyl-tRNA synthetase [Bacillus thuringiensis serovar konkukian
           str. 97-27]
 gi|81394327|sp|Q6HBJ0|SYY2_BACHK RecName: Full=Tyrosyl-tRNA synthetase 2; AltName:
           Full=Tyrosine--tRNA ligase 2; Short=TyrRS 2
 gi|49332651|gb|AAT63297.1| tyrosine--tRNA ligase (tyrosyl-tRNA synthetase) [Bacillus
           thuringiensis serovar konkukian str. 97-27]
          Length = 419

 Score =  492 bits (1266), Expect = e-137,   Method: Composition-based stats.
 Identities = 148/424 (34%), Positives = 221/424 (52%), Gaps = 21/424 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG ++Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  
Sbjct: 2   NIIDELEWRGAVNQQTDEEGLRKLVEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+P+ L+GG T  IGDPS R   R++   + +Q N++ +         +G G ++  M+
Sbjct: 62  GHQPVILIGGATGTIGDPSGRQSERQLQTLEVVQHNVDALTAQMKKLFDFG-GNSEVKMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I  I+ LR+ G  FS+N ML+ + V SRL  +  +SF EF Y ILQA DF  
Sbjct: 121 NNYDWTHEINIIEFLRDYGKNFSINSMLAKDIVASRL--DTGISFTEFTYQILQAMDFHH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKLFALTSPLLTTASGTKMGKTLSGA 244
           L    D +LQ+GGSDQWGNI  G+DL  +L+    K+F LT PLL  + GTK GK+  GA
Sbjct: 179 LYTKEDVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSAGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA--KLQGKEINEAKKII 302
           +WL+ E T+P+ F+Q+W N DD DVV + K  T L    ID +A          EA+K++
Sbjct: 239 VWLDPEKTTPFEFYQFWVNTDDRDVVKYLKYFTFLTKERIDELAVKVETEPHKREAQKVL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGL 352
           A E+T  VHG E   +A       F   I S          + MPT   SK+       +
Sbjct: 299 AEEMTKFVHGEEALLQAVKITAALFSGDIKSLTADEIEQGFKEMPTFQSSKET----KNI 354

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           +  +V  G   S  +AR  + + AI +N   +++    + +++      I +  GKKN+ 
Sbjct: 355 VEWLVDLGIEPSRRQAREDINNGAISMNGEKVTDVGTDVTVENSFDGRFIIIRKGKKNYS 414

Query: 413 ICHL 416
           +  L
Sbjct: 415 LVKL 418


>gi|226224199|ref|YP_002758306.1| tyrosyl-tRNA synthetase [Listeria monocytogenes Clip81459]
 gi|254852220|ref|ZP_05241568.1| tyrosyl-tRNA synthetase [Listeria monocytogenes FSL R2-503]
 gi|300765976|ref|ZP_07075947.1| tyrosyl-tRNA synthetase [Listeria monocytogenes FSL N1-017]
 gi|259517006|sp|C1KVP5|SYY_LISMC RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|225876661|emb|CAS05370.1| tyrosyl-tRNA synthetase [Listeria monocytogenes serotype 4b str.
           CLIP 80459]
 gi|258605528|gb|EEW18136.1| tyrosyl-tRNA synthetase [Listeria monocytogenes FSL R2-503]
 gi|300513294|gb|EFK40370.1| tyrosyl-tRNA synthetase [Listeria monocytogenes FSL N1-017]
          Length = 419

 Score =  492 bits (1266), Expect = e-137,   Method: Composition-based stats.
 Identities = 154/422 (36%), Positives = 218/422 (51%), Gaps = 21/422 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG I+Q ++   L     +  ++ Y G D +  S+H GHL   M+L   Q  
Sbjct: 2   NIIDELEWRGAIYQQTDEEGLRKWVEEKQISLYCGIDPSGDSMHIGHLIPFMILRRFQNA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI L+GG T  IGDPS + E R++   ++I +N+E ++        +  G + A M+
Sbjct: 62  GHRPIILVGGATGTIGDPSGKKEERKLQSMEQISKNVESLRVQLGKIFDF-EGNSAASMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   +  +D LR+ G  F+VN MLS + V SRL  E  +SF EF Y ILQA DF  
Sbjct: 121 NNYDWTKDVSILDFLRDYGKEFNVNTMLSKDIVASRL--EVGISFTEFAYQILQAMDFNH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSGA 244
           L +  DCRLQ+GGSDQWGNI  G+DL  + +    K F LT PLLT A GTK GK+  GA
Sbjct: 179 LYEFNDCRLQIGGSDQWGNITAGLDLIRKKQGENAKAFGLTIPLLTKADGTKFGKSEGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKII 302
           IWLN E T+PY F+Q+W N DD DVV + K  T L  +EID +AK       +  A+K +
Sbjct: 239 IWLNPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLTEAEIDELAKQVETEPHLRAAQKTL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGL 352
           A E+T  VH  E  E+A   +   F   + +          + +PT      E      L
Sbjct: 299 AAEMTKFVHSEEALEQALKISKALFSGDVKALTADEIEQGFKDVPTFVAEDTE----ANL 354

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           +  +V  G   S  +AR  + + AI IN     + +  +   D        +  GKK + 
Sbjct: 355 VDWLVTLGIEPSKRQAREDVGNGAIYINGERQQDLEKIMDASDRIENKFTIVRRGKKKYF 414

Query: 413 IC 414
           + 
Sbjct: 415 LV 416


>gi|218900219|ref|YP_002448630.1| tyrosyl-tRNA synthetase [Bacillus cereus G9842]
 gi|228903572|ref|ZP_04067693.1| Tyrosyl-tRNA synthetase [Bacillus thuringiensis IBL 4222]
 gi|228968188|ref|ZP_04129188.1| Tyrosyl-tRNA synthetase [Bacillus thuringiensis serovar sotto str.
           T04001]
 gi|218544372|gb|ACK96766.1| tyrosyl-tRNA synthetase [Bacillus cereus G9842]
 gi|228791491|gb|EEM39093.1| Tyrosyl-tRNA synthetase [Bacillus thuringiensis serovar sotto str.
           T04001]
 gi|228856001|gb|EEN00540.1| Tyrosyl-tRNA synthetase [Bacillus thuringiensis IBL 4222]
          Length = 420

 Score =  492 bits (1266), Expect = e-137,   Method: Composition-based stats.
 Identities = 144/420 (34%), Positives = 216/420 (51%), Gaps = 13/420 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG ++Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  
Sbjct: 2   NIIDELEWRGAVNQQTDEEGLRKLVEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P+ L+GG T  IGDPS R   R++   + +Q N++ +         +G G ++  M+
Sbjct: 62  GHHPVILIGGATGTIGDPSGRQSERQLQTLEVVQHNVDALTAQMKKLFDFG-GNSEVKMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I  I+ LR+ G  FS+N ML+ + V SRL  +  +SF EF Y ILQA DF  
Sbjct: 121 NNYDWTHEINIIEFLRDYGKNFSINSMLAKDIVASRL--DTGISFTEFTYQILQAMDFHH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKLFALTSPLLTTASGTKMGKTLSGA 244
           L    D +LQ+GGSDQWGNI  G+DL  +L+    K+F LT PLL  + GTK GK+  GA
Sbjct: 179 LYTKEDVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSAGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKII 302
           +WL+ E T+P+ F+Q+W N DD DV+ + K  T L    ID +A          EA+K++
Sbjct: 239 VWLDPEKTTPFEFYQFWVNTDDRDVIKYLKYFTFLKKERIDELAAKVEVEPHKREAQKVL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVS------RGMGLLTLI 356
           A E+T  VHG E   +A       F   I S     I     E+           ++  +
Sbjct: 299 AEEMTKFVHGEEALLQAEKITAALFSGDIKSLTADEIEQGFKEMPTFHSSKETKNIVEWL 358

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V  G   S  +AR  + + AI +N   +++    + +++      I +  GKKN+ +  L
Sbjct: 359 VDLGIEPSRRQAREDINNGAISMNGEKVTDVGTDVTVENSFDGRFIIIRKGKKNYSLVKL 418


>gi|30023099|ref|NP_834730.1| tyrosyl-tRNA synthetase [Bacillus cereus ATCC 14579]
 gi|229130324|ref|ZP_04259283.1| Tyrosyl-tRNA synthetase [Bacillus cereus BDRD-Cer4]
 gi|81433183|sp|Q815S0|SYY2_BACCR RecName: Full=Tyrosyl-tRNA synthetase 2; AltName:
           Full=Tyrosine--tRNA ligase 2; Short=TyrRS 2
 gi|29898659|gb|AAP11931.1| Tyrosyl-tRNA synthetase [Bacillus cereus ATCC 14579]
 gi|228653257|gb|EEL09136.1| Tyrosyl-tRNA synthetase [Bacillus cereus BDRD-Cer4]
          Length = 420

 Score =  492 bits (1266), Expect = e-137,   Method: Composition-based stats.
 Identities = 147/424 (34%), Positives = 220/424 (51%), Gaps = 21/424 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG ++Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  
Sbjct: 2   NIIDELEWRGAVNQQTDEEGLRKLVEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P+ L+GG T  IGDPS R   R++   + +Q N++ +         +G G ++  M+
Sbjct: 62  GHHPVILIGGATGTIGDPSGRQSERQLQTLEVVQHNVDALTAQMKKLFDFG-GNSEVKMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I  I+ LR+ G  FS+N ML+ + V SRL  +  +SF EF Y ILQA DF  
Sbjct: 121 NNYDWTHEINIIEFLRDYGKNFSINSMLAKDIVASRL--DTGISFTEFTYQILQAMDFHH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKLFALTSPLLTTASGTKMGKTLSGA 244
           L    D +LQ+GGSDQWGNI  G+DL  +L+    K+F LT PLL  + GTK GK+  GA
Sbjct: 179 LYTKEDVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSAGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKII 302
           +WL+ E T+P+ F+Q+W N DD DV+ + K  T L    ID +A          EA+K++
Sbjct: 239 VWLDPEKTTPFEFYQFWVNTDDRDVIKYLKYFTFLTKERIDELATKVEVEPHKREAQKVL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGL 352
           A E+T  VHG E   +A       F   I S          + MPT   SK+       +
Sbjct: 299 AEEMTKFVHGEEAFLQAEKITAALFSGDIKSLTADEIEQGFKEMPTFQSSKET----KNI 354

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           +  +V  G   S  +AR  + + AI +N   +++    + +++      I +  GKKN+ 
Sbjct: 355 VEWLVDLGIEPSRRQAREDINNGAISMNGEKVTDVGTDVTVENSFDGRFIIIRKGKKNYS 414

Query: 413 ICHL 416
           +  L
Sbjct: 415 LVKL 418


>gi|149181085|ref|ZP_01859585.1| tyrosyl-tRNA synthetase [Bacillus sp. SG-1]
 gi|148851172|gb|EDL65322.1| tyrosyl-tRNA synthetase [Bacillus sp. SG-1]
          Length = 420

 Score =  492 bits (1266), Expect = e-137,   Method: Composition-based stats.
 Identities = 153/423 (36%), Positives = 228/423 (53%), Gaps = 20/423 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D L  L  RG  +Q ++   L  L  +  ++ Y G D TA S+H GHL   + L   Q  
Sbjct: 2   DLLKDLEWRGITYQQTDEEGLKNLLDKEKISIYCGIDPTADSMHIGHLLPFLTLRRFQNQ 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+P+ L+GG T +IGDPS + E R++   + IQ N+E IK    S   +  G+T A+M+
Sbjct: 62  GHRPLVLVGGATGLIGDPSGKSEERKLQTVESIQHNVECIKSQLKSIFDF-EGETGAVMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W+  +  +  LR+ G    VN ML+ +++ SRL  E  +S+ EF Y ILQA DF  
Sbjct: 121 NNFDWIGPMDMVTFLRDFGKHIGVNYMLAKDTIASRL--ETGISYTEFTYTILQAMDFNH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSGA 244
           L +NY+C+LQ+GGSDQWGNI  G++L  R +    K F  T PL+T A G+K GKT SGA
Sbjct: 179 LYENYNCKLQIGGSDQWGNITTGLELIRRTREEESKAFGFTIPLVTKADGSKFGKTESGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKII 302
           IWL+ E TSPY F+Q+W N  DADVV + K  T L   EI+ +A+       + +A+K +
Sbjct: 239 IWLDPEKTSPYEFYQFWINTADADVVKYLKYFTFLSHEEIEALAETVETEPHLRKAQKAL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGL 352
           A E+T ++HG E   +A       F  +I            + +P+ + S +E    + L
Sbjct: 299 AEEMTKLIHGEEALAQAIKITEALFSGNIKELSSAEIKQGFKDVPSFTQSTEE---EINL 355

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           + L+V    + S  +AR  + + AI IN    ++ +  +   D        +  GKK + 
Sbjct: 356 VDLLVNTKISPSKRQAREDIGNGAIYINGDRTTDLQHVMSEADRIDGQFTIIRRGKKKYF 415

Query: 413 ICH 415
           +  
Sbjct: 416 MIQ 418


>gi|229135906|ref|ZP_04264669.1| Tyrosyl-tRNA synthetase [Bacillus cereus BDRD-ST196]
 gi|228647548|gb|EEL03620.1| Tyrosyl-tRNA synthetase [Bacillus cereus BDRD-ST196]
          Length = 420

 Score =  492 bits (1266), Expect = e-137,   Method: Composition-based stats.
 Identities = 145/420 (34%), Positives = 217/420 (51%), Gaps = 13/420 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG ++Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  
Sbjct: 2   NIIDELEWRGAVNQQTDEEGLRKLVEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P+ L+GG T  IGDPS R   R++   + +Q N++ +     +   +G G ++  M+
Sbjct: 62  GHHPVILIGGATGTIGDPSGRQSERQLQTLEVVQHNVDALTAQMKNLFDFG-GNSEVKMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I  I+ LR+ G  FS+N ML+ + V SRL  +  +SF EF Y ILQA DF  
Sbjct: 121 NNYDWTHKINIIEFLRDYGKNFSINSMLAKDIVASRL--DTGISFTEFTYQILQATDFHH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKLFALTSPLLTTASGTKMGKTLSGA 244
           L    D +LQ+GGSDQWGNI  G+DL  +L+    K+F LT PLL  + GTK GK+  GA
Sbjct: 179 LYTKEDVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSAGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKII 302
           IWL+ E T+P+ F+Q+W N DD DV+ + K  T L    ID +A          EA+K++
Sbjct: 239 IWLDPEKTTPFEFYQFWVNTDDRDVIKYLKYFTFLTKERIDELAAKVETEPHKREAQKVL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVS------RGMGLLTLI 356
           A E+T  VHG E   +A       F   I S     I     E+           ++  +
Sbjct: 299 AEEMTKFVHGEEAFLQAVKITAALFSGDIKSLTADEIEQGFKEMPTFQSSKETKNIVEWL 358

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V  G   S  +AR  + + AI +N   +++    + +++      I +  GKKN+ +  L
Sbjct: 359 VDLGIEPSRRQAREDINNGAISMNGEKVTDVSRDVTVENSFDGRFIIIRKGKKNYSLVEL 418


>gi|118480150|ref|YP_897301.1| tyrosyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
 gi|196047556|ref|ZP_03114765.1| tyrosyl-tRNA synthetase [Bacillus cereus 03BB108]
 gi|222098519|ref|YP_002532577.1| tyrosyl-tRNA synthetase [Bacillus cereus Q1]
 gi|225867053|ref|YP_002752431.1| tyrosyl-tRNA synthetase [Bacillus cereus 03BB102]
 gi|229187314|ref|ZP_04314458.1| Tyrosyl-tRNA synthetase [Bacillus cereus BGSC 6E1]
 gi|118419375|gb|ABK87794.1| tyrosyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
 gi|196021590|gb|EDX60288.1| tyrosyl-tRNA synthetase [Bacillus cereus 03BB108]
 gi|221242578|gb|ACM15288.1| tyrosyl-trna synthetase [Bacillus cereus Q1]
 gi|225785692|gb|ACO25909.1| tyrosine--tRNA ligase [Bacillus cereus 03BB102]
 gi|228596165|gb|EEK53841.1| Tyrosyl-tRNA synthetase [Bacillus cereus BGSC 6E1]
          Length = 419

 Score =  492 bits (1266), Expect = e-137,   Method: Composition-based stats.
 Identities = 145/420 (34%), Positives = 216/420 (51%), Gaps = 13/420 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG ++Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  
Sbjct: 2   NIIDELEWRGAVNQQTDEEGLRKLVEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P+ L+GG T  IGDPS R   R++   + +Q N++ +         +G G ++  M+
Sbjct: 62  GHHPVILIGGATGTIGDPSGRQSERQLQTLEVVQHNVDALTAQMKKLFDFG-GNSEVKMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I  I+ LR+ G  FS+N ML+ + V SRL  +  +SF EF Y ILQA DF  
Sbjct: 121 NNYDWTHEINIIEFLRDYGKNFSINSMLAKDIVASRL--DTGISFTEFTYQILQAMDFHH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKLFALTSPLLTTASGTKMGKTLSGA 244
           L    D +LQ+GGSDQWGNI  G+DL  +L+    K+F LT PLL  + GTK GK+  GA
Sbjct: 179 LYTKEDVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSAGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA--KLQGKEINEAKKII 302
           +WL+ E T+P+ F+Q+W N DD DVV + K  T L    ID +A          EA+K++
Sbjct: 239 VWLDPEKTTPFEFYQFWVNTDDRDVVKYLKYFTFLTKERIDELAVKVETEPHKREAQKVL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVS------RGMGLLTLI 356
           A E+T  VHG E   +A       F   I S     I     E+           ++  +
Sbjct: 299 AEEMTKFVHGEEAFLQAVKITAALFSGDIKSLTADEIEQGFKEMPTFQSSKETKNIVEWL 358

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V  G   S  +AR  + + AI +N   +++    + +++      I +  GKKN+ +  L
Sbjct: 359 VDLGIEPSRRQAREDINNGAISMNGEKVTDVGTDVTVENSFDGRFIIIRKGKKNYSLVKL 418


>gi|163942790|ref|YP_001647674.1| tyrosyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
 gi|163864987|gb|ABY46046.1| tyrosyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
          Length = 420

 Score =  492 bits (1266), Expect = e-137,   Method: Composition-based stats.
 Identities = 148/424 (34%), Positives = 220/424 (51%), Gaps = 21/424 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG ++Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  
Sbjct: 2   NIIDELEWRGAVNQQTDEEGLRKLVEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P+ L+GG T  IGDPS R   R++   + +Q N++ +         +G G ++  M+
Sbjct: 62  GHHPVILIGGATGTIGDPSGRQSERQLQTLEVVQHNVDALTAQMKKLFDFG-GNSEVKMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I  I+ LR+ G  FS+N ML+ + V SRL  +  +SF EF Y ILQA DF  
Sbjct: 121 NNYDWTHKINIIEFLRDYGKNFSINSMLAKDIVASRL--DTGISFTEFTYQILQAMDFHH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKLFALTSPLLTTASGTKMGKTLSGA 244
           L    D +LQ+GGSDQWGNI  G+DL  +L+    K+F LT PLL  + GTK GK+  GA
Sbjct: 179 LYTKEDVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSAGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKII 302
           IWL+ E T+P+ F+Q+W N DD DV+ + K  T L    ID +A          EA+K++
Sbjct: 239 IWLDPEKTTPFEFYQFWVNTDDRDVIKYLKYFTFLTKERIDELAAKVETEPHKREAQKVL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGL 352
           A E+T  VHG E   +A       F   I S          + MPT   SK+       +
Sbjct: 299 AEEMTKFVHGEEAFLQAVKITAALFSGDIKSLTADEIEQGFKEMPTFQSSKET----KNI 354

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           +  +V  G   S  +AR  + + AI +N   +++    + +++      I +  GKKN+ 
Sbjct: 355 VEWLVDLGIEPSRRQAREDINNGAISMNGEKVTDVSRDVTVENSFDGRFIIIRKGKKNYS 414

Query: 413 ICHL 416
           +  L
Sbjct: 415 LVEL 418


>gi|229181362|ref|ZP_04308691.1| Tyrosyl-tRNA synthetase [Bacillus cereus 172560W]
 gi|228602098|gb|EEK59590.1| Tyrosyl-tRNA synthetase [Bacillus cereus 172560W]
          Length = 419

 Score =  492 bits (1266), Expect = e-137,   Method: Composition-based stats.
 Identities = 148/424 (34%), Positives = 221/424 (52%), Gaps = 21/424 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG ++Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  
Sbjct: 2   NIIDELEWRGAVNQQTDEEGLRKLVEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P+ L+GG T  IGDPS R   R++   + +Q N++ +         +G G ++  M+
Sbjct: 62  GHHPVILIGGATGTIGDPSGRQSERQLQTLEVVQHNVDALTAQMKKLFDFG-GNSEVKMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I  I+ LR+ G  FS+N ML+ + V SRL  +  +SF EF Y ILQA DF  
Sbjct: 121 NNYDWTHEINIIEFLRDYGKNFSINSMLAKDIVASRL--DTGISFTEFTYQILQAMDFHH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKLFALTSPLLTTASGTKMGKTLSGA 244
           L    D +LQ+GGSDQWGNI  G+DL  +L+    K+F LT PLL  + GTK GK+  GA
Sbjct: 179 LYTKEDVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSAGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKII 302
           +WL+ E T+P+ F+Q+W N DD DV+ + K  T L    ID +A     E    EA+K++
Sbjct: 239 VWLDPEKTTPFEFYQFWVNTDDRDVIKYLKYFTFLTKERIDELATKVEAEPHKREAQKVL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGL 352
           A E+T  VHG E   +A       F   I S          + MPT   SK+       +
Sbjct: 299 AEEMTKFVHGEEAFLQAEKITAALFSGDIKSLTADEIEQGFKEMPTFQSSKET----KNI 354

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           +  +V  G   S  +AR  + + AI +N   +++    + +++      I +  GKKN+ 
Sbjct: 355 VEWLVDLGIEPSRRQAREDINNGAISMNGEKVTDVGTDVTVENSFDGRFIIIRKGKKNYS 414

Query: 413 ICHL 416
           +  L
Sbjct: 415 LIKL 418


>gi|169825148|ref|YP_001692759.1| tyrosyl-tRNA synthetase [Finegoldia magna ATCC 29328]
 gi|167831953|dbj|BAG08869.1| tyrosyl-tRNA synthetase [Finegoldia magna ATCC 29328]
          Length = 415

 Score =  492 bits (1266), Expect = e-137,   Method: Composition-based stats.
 Identities = 172/411 (41%), Positives = 256/411 (62%), Gaps = 5/411 (1%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L  RG+  Q +   EL  L  +  V  YIG+D TA SL  GH  QLM++  +Q  
Sbjct: 10  NVFDELVARGYFEQATYEDELRDLLGKERVPFYIGFDATADSLTIGHFIQLMVMMRMQAH 69

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH PI L+GGGT++IGDPS R++ R +M  + I EN  +     + FI +G  K  A + 
Sbjct: 70  GHIPICLLGGGTTMIGDPSGRNDMRSIMTKEVIDENARRFYSQMTRFIDFGDDK--AYIE 127

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN+ WL ++ ++D +REIG  FSVN+ML+ ES ++R+K  Q L+F EF+YM++Q+YD++ 
Sbjct: 128 NNKDWLLNLNFLDFMREIGVHFSVNQMLTLESYKNRMK--QGLTFFEFSYMLMQSYDYLV 185

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + Y C+LQMGGSDQW NI+ G DL  +L+  K++A+T  LLTTA G KMGK+  GA+W
Sbjct: 186 LYRKYGCKLQMGGSDQWSNILGGYDLVRKLENDKVYAMTFKLLTTADGVKMGKSQKGAVW 245

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           L++  T+PY+ +QY RN+DD DV  F   LT LP  E  R+  L+G EIN+AK+++A E+
Sbjct: 246 LDENKTTPYDLFQYMRNVDDRDVEKFLLMLTFLPTDECKRLGSLEGSEINKAKEVLAFEV 305

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
             +VHG E+AE+A   A   F+ ++  ++MPT  +   +   G+GLL L+   G   S +
Sbjct: 306 CKLVHGEEKAEEARQTANALFNSNVVDENMPTTEMKALDFENGIGLLNLLTMTGLTQSNS 365

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           EARR +  N I +N++  ++ K  I + DF+    + +  GKK +    L 
Sbjct: 366 EARRLVTQNGISVNDNKEADPKRVITIHDFNDD-ELIIKKGKKVYHRVKLV 415


>gi|94987712|ref|YP_595813.1| tyrosyl-tRNA synthetase [Streptococcus pyogenes MGAS9429]
 gi|94989592|ref|YP_597692.1| tyrosyl-tRNA synthetase [Streptococcus pyogenes MGAS10270]
 gi|94991581|ref|YP_599680.1| tyrosyl-tRNA synthetase [Streptococcus pyogenes MGAS2096]
 gi|123080347|sp|Q1JJ25|SYY_STRPD RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|123257867|sp|Q1JE22|SYY_STRPB RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|123258252|sp|Q1JNY0|SYY_STRPC RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|94541220|gb|ABF31269.1| tyrosyl-tRNA synthetase [Streptococcus pyogenes MGAS9429]
 gi|94543100|gb|ABF33148.1| Tyrosyl-tRNA synthetase [Streptococcus pyogenes MGAS10270]
 gi|94545089|gb|ABF35136.1| Tyrosyl-tRNA synthetase [Streptococcus pyogenes MGAS2096]
          Length = 418

 Score =  492 bits (1266), Expect = e-137,   Method: Composition-based stats.
 Identities = 144/417 (34%), Positives = 225/417 (53%), Gaps = 11/417 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L  RG + Q ++ + L    ++G V+ Y GYD TA SLH GHL  ++    LQ  
Sbjct: 2   NIFEELKARGLVFQTTDEQALVKALTEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP +L+GG T +IGDPSF+D  R +   + + E  +KIKG  S+F+ +  G   A ++
Sbjct: 62  GHKPYALVGGATGLIGDPSFKDAERSLQTKETVLEWSDKIKGQLSTFLDFENGDNKAELV 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I +ID LR++G +F+VN M+S +SV+ R+  E  +S+ EF Y I+Q YDF E
Sbjct: 122 NNYDWFSQISFIDFLRDVGKYFTVNYMMSKDSVKKRI--ETGISYTEFAYQIMQGYDFYE 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L   ++  LQ+GGSDQWGN+  G +L  +        +T PL+T ++G K GK+   A+W
Sbjct: 180 LNDKHNVTLQIGGSDQWGNMTAGTELLRKKADKTGHVMTVPLITDSTGKKFGKSEGNAVW 239

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIAT 304
           L+ + TSPY  +Q+W N+ D D V F K  T L + EI  +        +E  A+K +A 
Sbjct: 240 LDADKTSPYEMYQFWLNVMDDDAVRFLKIFTFLSLDEIAEIETQFNAARHERLAQKTLAR 299

Query: 305 EITTMVHGREEAEKAATAAMECFDMSI-------HSQHMPTISISKDEVSRGMGLLTLIV 357
           E+ T+VHG E  ++A     + F  +I         Q +  +     +    + L+ ++V
Sbjct: 300 EVVTLVHGEEAYKQALNITEQLFAGNIKNLSANELKQGLSNVPNYHVQSEDSLNLVDMLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            AG + S  +AR  +++ AI IN   + +   Q+   D        +  GKK + + 
Sbjct: 360 TAGISPSKRQAREDVQNGAIYINGDRVQDLDYQLSNDDKIDDQLTVIRRGKKKYAVL 416


>gi|299535427|ref|ZP_07048749.1| tyrosyl-tRNA synthetase [Lysinibacillus fusiformis ZC1]
 gi|298729188|gb|EFI69741.1| tyrosyl-tRNA synthetase [Lysinibacillus fusiformis ZC1]
          Length = 422

 Score =  492 bits (1266), Expect = e-137,   Method: Composition-based stats.
 Identities = 141/425 (33%), Positives = 239/425 (56%), Gaps = 20/425 (4%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           ++ L  L  RG ++Q ++   +  L ++  V+ Y G D TA S+H GH+  L+ L   QK
Sbjct: 3   NELLQDLEWRGLLYQQTDAEGMAKLLNEQSVSLYCGVDPTADSMHIGHIVPLLTLRRFQK 62

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+PI L+GG T +IGDPS R E R++   ++I +N++ I+       ++      A +
Sbjct: 63  AGHRPILLVGGATGMIGDPSGRSEERQLQTVEQIDKNVQGIRSQLERIFEFAEDGNGAQL 122

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  W+ +I  I+ LR+ G   +VN ML+ +++ SRL  +  +SF EF Y ++Q  D+ 
Sbjct: 123 VNNRDWIGNINTIEFLRDYGKLINVNYMLAKDTIASRL--DTGISFTEFAYTLIQGIDYN 180

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSG 243
            L  +Y+CR+Q+GGSDQWGNI  G+++  +      K F +T PL+T A GTK GKT  G
Sbjct: 181 HLYNHYNCRIQVGGSDQWGNITTGLEVIRKTHEEETKAFGITIPLVTKADGTKFGKTAGG 240

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA--KLQGKEINEAKKI 301
           A+WL+ + TSPY F+Q+W N  DADV+ + K  T L   EI+ +A    +   + +A+K 
Sbjct: 241 AVWLDSKKTSPYEFYQFWINAADADVIKYLKIFTFLSREEIEALAVSVEEEPHLRKAQKA 300

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMG 351
           +A E+T ++HG+E  E+A       F   + +          + +P+I ++KD+      
Sbjct: 301 LAEEMTRLIHGQEALEQAIRITAALFSGDLKALSAEEMKDAFKDVPSIEMAKDD----KN 356

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           ++ L+V+AG ++S  +AR  + + AI +N   +++ +  +  +D        +  GKK +
Sbjct: 357 IVDLLVEAGISSSKRQAREDVSNGAISVNGEKVTDLEYVVDAKDRLEDAFSIVRRGKKKY 416

Query: 412 IICHL 416
            +   
Sbjct: 417 HMVKF 421


>gi|332653332|ref|ZP_08419077.1| tyrosine--tRNA ligase [Ruminococcaceae bacterium D16]
 gi|332518478|gb|EGJ48081.1| tyrosine--tRNA ligase [Ruminococcaceae bacterium D16]
          Length = 407

 Score =  491 bits (1265), Expect = e-137,   Method: Composition-based stats.
 Identities = 171/408 (41%), Positives = 245/408 (60%), Gaps = 6/408 (1%)

Query: 10  SILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
             L  RG I Q++N  E+  + ++G    YIG+D TA SLH GH   L L+  LQ  G++
Sbjct: 5   EELKARGLIAQVTNEEEISKMINEGKAVFYIGFDPTADSLHVGHFMALCLMKRLQMAGNR 64

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
           PI+L+GGGT  IGDPS R + R MM  + IQ N +  K     FI++G GK  A M+NN 
Sbjct: 65  PIALIGGGTGYIGDPSGRTDMRSMMTPETIQHNCDCFKKQMERFIEFGEGK--AQMVNNA 122

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
            WL  + YIDLLR++G+ FSVN ML  +    R+  E+ LSFLEFNYMI+Q+YDF  L +
Sbjct: 123 DWLLGLNYIDLLRDVGACFSVNNMLRAKCYEQRM--EKGLSFLEFNYMIMQSYDFYYLFQ 180

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
           +Y C +Q GG DQW N++ G +L  R       A+T  LL  + G KMGKT  GA+WL+ 
Sbjct: 181 HYGCNMQFGGDDQWSNMLGGTELIRRKLGKDAHAMTITLLLNSEGKKMGKTAKGAVWLDP 240

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTM 309
             TSPY F+QYWRN+ D DV+   + LT LP+ +ID M K +G ++N AK+I+A E+T +
Sbjct: 241 NKTSPYEFYQYWRNVGDQDVLKCLRMLTFLPLEQIDEMDKWEGSQLNTAKEILAFELTKL 300

Query: 310 VHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTNEA 368
           VHG EEA+KA  AA   F       ++PT +++ + ++ G +G+L ++V    A S  EA
Sbjct: 301 VHGEEEAKKAQDAAKALFVGGGDMSNVPTTTLTAENLTDGSIGILDMMVTCKLAPSKKEA 360

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           RR ++   + +N+  +S+   +    D    G I +  GKK +    +
Sbjct: 361 RRLVEQGGVTVNDEKVSDVNTRYTADDLSGDG-IMVRKGKKVYHRVQM 407


>gi|229014257|ref|ZP_04171377.1| Tyrosyl-tRNA synthetase [Bacillus mycoides DSM 2048]
 gi|228747034|gb|EEL96917.1| Tyrosyl-tRNA synthetase [Bacillus mycoides DSM 2048]
          Length = 420

 Score =  491 bits (1265), Expect = e-137,   Method: Composition-based stats.
 Identities = 148/424 (34%), Positives = 220/424 (51%), Gaps = 21/424 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG ++Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  
Sbjct: 2   NIIDELEWRGAVNQQTDEEGLRKLVEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P+ L+GG T  IGDPS R   R++   + +Q N++ +         +G G ++  M+
Sbjct: 62  GHHPVILIGGATGTIGDPSGRQSERQLQTLEVVQHNVDALTAQMKKLFDFG-GNSEVKMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I  I+ LR+ G  FS+N ML+ + V SRL  +  +SF EF Y ILQA DF  
Sbjct: 121 NNYDWTHKINIIEFLRDYGKNFSINSMLAKDIVASRL--DTGISFTEFTYQILQAMDFHH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKLFALTSPLLTTASGTKMGKTLSGA 244
           L    D +LQ+GGSDQWGNI  G+DL  +L+    K+F LT PLL  + GTK GK+  GA
Sbjct: 179 LYTKEDVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSAGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKII 302
           IWL+ E T+P+ F+Q+W N DD DV+ + K  T L    ID +A          EA+K++
Sbjct: 239 IWLDPEKTTPFEFYQFWVNTDDRDVIKYLKYFTFLTKERIDELAAKVETEPHKREAQKVL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGL 352
           A E+T  VHG E   +A       F   I S          + MPT   SK+       +
Sbjct: 299 AEEMTKFVHGEEAFLQAVKITAALFSGDIKSLTADEIEQGFKEMPTFQSSKET----KNI 354

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           +  +V  G   S  +AR  + + AI +N   +++    + +++      I +  GKKN+ 
Sbjct: 355 VEWLVDLGIEPSRRQAREDINNGAISMNGEKVTDVGTDVTVENSFDGRFIIIRKGKKNYS 414

Query: 413 ICHL 416
           +  L
Sbjct: 415 LVEL 418


>gi|228910908|ref|ZP_04074717.1| Tyrosyl-tRNA synthetase [Bacillus thuringiensis IBL 200]
 gi|228848859|gb|EEM93704.1| Tyrosyl-tRNA synthetase [Bacillus thuringiensis IBL 200]
          Length = 420

 Score =  491 bits (1265), Expect = e-137,   Method: Composition-based stats.
 Identities = 147/424 (34%), Positives = 220/424 (51%), Gaps = 21/424 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG ++Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  
Sbjct: 2   NIIDELEWRGAVNQQTDEEGLRKLIEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P+ L+GG T  IGDPS R   R++   + +Q N++ +         +G G ++  M+
Sbjct: 62  GHHPVILIGGATGTIGDPSGRQSERQLQTLEVVQHNVDALTAQMKKLFDFG-GNSEVKMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I  I+ LR+ G  FS+N ML+ + V SRL  +  +SF EF Y ILQA DF  
Sbjct: 121 NNYDWTHEINIIEFLRDYGKNFSINSMLAKDIVASRL--DTGISFTEFTYQILQAMDFHH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKLFALTSPLLTTASGTKMGKTLSGA 244
           L    D +LQ+GGSDQWGNI  G+DL  +L+    K+F LT PLL  + GTK GK+  GA
Sbjct: 179 LYTKEDVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSAGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKII 302
           +WL+ E T+P+ F+Q+W N DD DV+ + K  T L    I  +A     E    EA+K++
Sbjct: 239 VWLDPEKTTPFEFYQFWVNTDDRDVIKYLKYFTFLTKERIGELAAKVEAEPHKREAQKVL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGL 352
           A E+T  VHG E   +A       F   I S          + MPT   SK+       +
Sbjct: 299 AEEMTKFVHGEEALLQAEKITAALFSGDIKSLTADEIEQGFKEMPTFQSSKET----KNI 354

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           +  +V  G   S  +AR  + + AI +N   +++    + +++      I +  GKKN+ 
Sbjct: 355 VEWLVDLGIEPSRRQAREDINNGAISMNGEKVTDVGTDVTVENSFDGRFIIIRKGKKNYS 414

Query: 413 ICHL 416
           +  L
Sbjct: 415 LVKL 418


>gi|228988321|ref|ZP_04148414.1| Tyrosyl-tRNA synthetase [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|229049757|ref|ZP_04194314.1| Tyrosyl-tRNA synthetase [Bacillus cereus AH676]
 gi|229147620|ref|ZP_04275964.1| Tyrosyl-tRNA synthetase [Bacillus cereus BDRD-ST24]
 gi|229158672|ref|ZP_04286730.1| Tyrosyl-tRNA synthetase [Bacillus cereus ATCC 4342]
 gi|228624656|gb|EEK81425.1| Tyrosyl-tRNA synthetase [Bacillus cereus ATCC 4342]
 gi|228635829|gb|EEK92315.1| Tyrosyl-tRNA synthetase [Bacillus cereus BDRD-ST24]
 gi|228722670|gb|EEL74058.1| Tyrosyl-tRNA synthetase [Bacillus cereus AH676]
 gi|228771386|gb|EEM19859.1| Tyrosyl-tRNA synthetase [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
          Length = 420

 Score =  491 bits (1265), Expect = e-137,   Method: Composition-based stats.
 Identities = 148/424 (34%), Positives = 220/424 (51%), Gaps = 21/424 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG ++Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  
Sbjct: 2   NIIDELEWRGAVNQQTDEEGLRKLVEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P+ L+GG T  IGDPS R   R++   + +Q N++ +         +G G ++  M+
Sbjct: 62  GHHPVILIGGATGTIGDPSGRQSERQLQTLEVVQHNVDALTAQMKKLFDFG-GNSEVKMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I  I+ LR+ G  FS+N ML+ + V SRL  +  +SF EF Y ILQA DF  
Sbjct: 121 NNYDWTHEINIIEFLRDYGKNFSINSMLAKDIVASRL--DTGISFTEFTYQILQAMDFHH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKLFALTSPLLTTASGTKMGKTLSGA 244
           L    D +LQ+GGSDQWGNI  G+DL  +L+    K+F LT PLL  + GTK GK+  GA
Sbjct: 179 LYTKEDVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSAGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA--KLQGKEINEAKKII 302
           +WL+ E T+P+ F+Q+W N DD DVV + K  T L    ID +A          EA+K++
Sbjct: 239 VWLDPEKTTPFEFYQFWVNTDDRDVVKYLKYFTFLTKERIDELAVKVETEPHKREAQKVL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGL 352
           A E+T  VHG E   +A       F   I S          + MPT   SK+       +
Sbjct: 299 AEEMTKFVHGEEAFLQAVKITAALFSGDIKSLTADEIEQGFKEMPTFQSSKET----KNI 354

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           +  +V  G   S  +AR  + + AI +N   +++    + +++      I +  GKKN+ 
Sbjct: 355 VEWLVDLGIEPSRRQAREDINNGAISMNGEKVTDVGTDVTVENSFDGRFIIIRKGKKNYS 414

Query: 413 ICHL 416
           +  L
Sbjct: 415 LVKL 418


>gi|255994648|ref|ZP_05427783.1| tyrosine--tRNA ligase [Eubacterium saphenum ATCC 49989]
 gi|255993361|gb|EEU03450.1| tyrosine--tRNA ligase [Eubacterium saphenum ATCC 49989]
          Length = 418

 Score =  491 bits (1265), Expect = e-137,   Method: Composition-based stats.
 Identities = 176/408 (43%), Positives = 256/408 (62%), Gaps = 5/408 (1%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +   +L ERGFI Q ++  E+  L +   +  YIG+D TA SLH GH  Q++++ ++QK 
Sbjct: 13  NVFDVLKERGFIEQTTHEDEIRELLANQKIKFYIGFDPTADSLHVGHFMQIIIMMYMQKF 72

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH PI L+GGGT ++GDPS R + R+MM  + ++E+  K + +F  FI +   K  A+ +
Sbjct: 73  GHTPIVLVGGGTGMVGDPSGRTDMRKMMTVETVREHCRKFEKLFERFIDFSDNK--AIAI 130

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL ++ YID LREIGS FSVNRMLS E  + RLK  + LSFLEFNYM++QAYDF+ 
Sbjct: 131 NNADWLMNLNYIDFLREIGSQFSVNRMLSAECFKQRLK--KGLSFLEFNYMLMQAYDFLV 188

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L +N DC++Q GG DQW NI+ G+DL  R +  ++F +T  LLT + G KMGKT SGA+W
Sbjct: 189 LYRNLDCKMQFGGDDQWSNILAGVDLVRRKEQGQVFGMTFSLLTNSQGKKMGKTASGALW 248

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           L+   TS Y F+QYWRN++D DV    K LT LP+ EI+ M   +G+ IN+AK+++A E+
Sbjct: 249 LDANKTSAYEFYQYWRNVEDEDVKKCLKMLTFLPIEEIEAMTCEKGENINKAKEVLAYEV 308

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
           T +VHG E A+   TA    F      +++PT  I++DE   G+GL+ L+ +A   +S +
Sbjct: 309 TKLVHGEEVAKNTETAVKAAFSGEGDLENLPTTVITEDEAKSGIGLIDLMKRAELISSNS 368

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           E  R +K   + I +  + + K  I   DF     + +  GKK +   
Sbjct: 369 EGFRLVKQGGVSIGDVKVEDGKRIITEGDFSDNS-LVIKKGKKVYHRI 415


>gi|19745275|ref|NP_606411.1| tyrosyl-tRNA synthetase [Streptococcus pyogenes MGAS8232]
 gi|81633253|sp|Q8P2Y5|SYY_STRP8 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|19747371|gb|AAL96910.1| putative tyrosine-tRNA ligase [Streptococcus pyogenes MGAS8232]
          Length = 418

 Score =  491 bits (1265), Expect = e-137,   Method: Composition-based stats.
 Identities = 145/417 (34%), Positives = 225/417 (53%), Gaps = 11/417 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L  RG + Q ++ + L    ++G V+ Y GYD TA SLH GHL  ++    LQ  
Sbjct: 2   NIFEELKARGLVFQTTDEQALVKALTEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP +L+GG T +IGDPSF+D  R +   + + E  +KIKG  S+F+ +  G   A ++
Sbjct: 62  GHKPYALVGGATGLIGDPSFKDAERSLQTKETVLEWSDKIKGQLSTFLDFENGDNKAELV 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I +ID LR++G +F+VN M+S +SV+ R+  E  +S+ EF Y I+Q YDF E
Sbjct: 122 NNYDWFSQISFIDFLRDVGKYFTVNYMMSKDSVKKRI--ETGISYTEFAYQIMQGYDFYE 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L   ++  LQ+GGSDQWGN+  G +L  +        +T PL+T ++G K GK+   A+W
Sbjct: 180 LNDKHNVTLQIGGSDQWGNMTAGTELLRKKADKTGHVMTVPLITDSTGKKFGKSEGNAVW 239

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIAT 304
           L+ + TSPY  +Q+W N+ D D V F K  T L + EI  +        +E  A+K +A 
Sbjct: 240 LDADKTSPYEMYQFWLNVMDDDAVRFLKIFTFLSLDEIAEIESEFNAARHERLAQKTLAR 299

Query: 305 EITTMVHGREEAEKAATAAMECFDMSI-------HSQHMPTISISKDEVSRGMGLLTLIV 357
           E+ T+VHG E  ++A     + F  +I         Q +  +     +    + L+ ++V
Sbjct: 300 EVVTLVHGEEAYKQALNITEQLFAGNIKNLSANELKQGLSNVPNYHVQSEDSLNLVDMLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            AG + S  +AR  +++ AI IN   I +   Q+   D        +  GKK + + 
Sbjct: 360 TAGISPSKRQAREDVQNGAIYINGDRIQDLDYQLSNDDKIDDQLTVIRRGKKKYAVL 416


>gi|21909609|ref|NP_663877.1| tyrosyl-tRNA synthetase [Streptococcus pyogenes MGAS315]
 gi|28894986|ref|NP_801336.1| tyrosyl-tRNA synthetase [Streptococcus pyogenes SSI-1]
 gi|81759440|sp|Q8K8W5|SYY_STRP3 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|21903790|gb|AAM78680.1| putative tyrosine-tRNA ligase [Streptococcus pyogenes MGAS315]
 gi|28810231|dbj|BAC63169.1| putative tyrosine-tRNA ligase [Streptococcus pyogenes SSI-1]
          Length = 418

 Score =  491 bits (1265), Expect = e-137,   Method: Composition-based stats.
 Identities = 145/417 (34%), Positives = 225/417 (53%), Gaps = 11/417 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L  RG + Q ++ + L    ++G V+ Y GYD TA SLH GHL  ++    LQ  
Sbjct: 2   NIFEELKARGLVFQTTDEQALVKALTEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP +L+GG T +IGDPSF+D  R +   + + E  +KIKG  S+F+ +  G   A ++
Sbjct: 62  GHKPYALVGGATGLIGDPSFKDAERSLQTKETVLEWSDKIKGQLSTFLDFENGDNKAELV 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I +ID LR++G +F+VN M+S +SV+ R+  E  +S+ EF Y I+Q YDF E
Sbjct: 122 NNYDWFSQISFIDFLRDVGKYFTVNYMMSKDSVKKRI--ETGISYTEFAYQIMQGYDFYE 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L   ++  LQ+GGSDQWGN+  G +L  +        +T PL+T ++G K GK+   A+W
Sbjct: 180 LNDKHNVTLQIGGSDQWGNMTAGTELLRKKADKTGHVMTVPLITDSTGKKFGKSEGNAVW 239

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIAT 304
           L+ + TSPY  +Q+W N+ D D V F K  T L + EI  +        +E  A+K +A 
Sbjct: 240 LDADKTSPYEMYQFWLNVMDDDAVRFLKIFTFLSLDEIAEIESQFNAARHERLAQKTLAR 299

Query: 305 EITTMVHGREEAEKAATAAMECFDMSI-------HSQHMPTISISKDEVSRGMGLLTLIV 357
           E+ T+VHG E  ++A     + F  +I         Q +  +     +    + L+ ++V
Sbjct: 300 EVVTLVHGEEAYKQALNITEQLFAGNIKNLSANELKQGLSNVPNYHVQSEDSLNLVDMLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            AG + S  +AR  +++ AI IN   I +   Q+   D        +  GKK + + 
Sbjct: 360 TAGISPSKRQAREDVQNGAIYINGDRIQDLDYQLSNDDKIDDQLTVIRRGKKKYAVL 416


>gi|304321919|ref|YP_003855562.1| tyrosyl-tRNA synthetase [Parvularcula bermudensis HTCC2503]
 gi|303300821|gb|ADM10420.1| tyrosyl-tRNA synthetase [Parvularcula bermudensis HTCC2503]
          Length = 423

 Score =  491 bits (1265), Expect = e-137,   Method: Composition-based stats.
 Identities = 211/421 (50%), Positives = 290/421 (68%), Gaps = 9/421 (2%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  F+SD L +L ERGFIHQI++P  LD    QG VT YIG+D TA SLHAGHLTQ+M+L
Sbjct: 1   MTRFQSDLLRVLDERGFIHQITHPDALDQAAKQGTVTGYIGFDATADSLHAGHLTQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            WLQ+TGH+PI+LMGGGT+ IGDPS +D  R+++    I  NI  I+  F  F+++G   
Sbjct: 61  HWLQQTGHRPIALMGGGTTKIGDPSGKDTQRKLLDDATIAANIAGIRQSFDPFLQFGDSG 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
             ALM+NN+ WL S+ YI  LR+ G  F++NRML+F+SV+ RL REQ L+FLEFNYM++Q
Sbjct: 121 NQALMVNNDDWLSSLGYIRFLRDFGVHFTINRMLTFDSVKLRLDREQPLTFLEFNYMLMQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL-------KTPKLFALTSPLLTTAS 233
           AYDF EL + Y C LQMGGSDQWGNI+ G++L  R+        +  +  LT+PLLTTAS
Sbjct: 181 AYDFFELNERYGCTLQMGGSDQWGNIVNGVELCRRIAAAEGAEGSRDVCGLTTPLLTTAS 240

Query: 234 GTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK 293
           G KMGKT +GA+WLN +  SPY +WQYWRN++DADVV+   R TTLP+ +I R+  L G 
Sbjct: 241 GKKMGKTENGAVWLNADRLSPYEYWQYWRNVEDADVVTMLTRFTTLPLDDIQRLGALGGA 300

Query: 294 EINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLL 353
           EINEAKKI+ATE T ++HGRE AE AA  A + F+    +  +P++++++  ++ G+ L 
Sbjct: 301 EINEAKKILATETTALLHGREAAEAAAETARQTFEQGGAADDLPSVTVAEAALAAGLPLF 360

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
               + G  +S +E RRH+K+ A+K+N++  + E+  +  +       IKLS GKK H +
Sbjct: 361 EPFTELGLISSKSEGRRHIKAGALKVNDAPAT-EEFSLTPEYLIDGR-IKLSIGKKKHGL 418

Query: 414 C 414
            
Sbjct: 419 V 419


>gi|302533702|ref|ZP_07286044.1| tyrosyl-tRNA synthetase [Streptomyces sp. C]
 gi|302442597|gb|EFL14413.1| tyrosyl-tRNA synthetase [Streptomyces sp. C]
          Length = 422

 Score =  491 bits (1265), Expect = e-137,   Method: Composition-based stats.
 Identities = 139/422 (32%), Positives = 227/422 (53%), Gaps = 11/422 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +D +  L  RG   Q ++   L    + G VT Y G+D TA+SLH GHL Q++ +  LQ+
Sbjct: 2   TDIVDELKWRGLFAQSTDEEALRKAFADGPVTFYCGFDPTAASLHVGHLVQVLTVRRLQQ 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+P++L+GG T  IGDP      R +   + +   + +++     F+ +  G+  A+M
Sbjct: 62  AGHRPLALVGGATGQIGDPRP-TAERTLNDPETVANWVNRLRTQIEPFLSF-EGENAAVM 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  W   +  I+ LR+IG  F VN+ML+ +SV  RL  EQ +S+ EF+Y +LQ  DF+
Sbjct: 120 VNNLDWTAGLSAIEFLRDIGKHFRVNKMLTKDSVAKRLDSEQGISYTEFSYQLLQGMDFL 179

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASGTKMGKTLSGA 244
           EL + Y C LQ GGSDQWGN+  G+DL  R++    + A+ +PL+  A GTK GK+ SGA
Sbjct: 180 ELYRRYGCTLQQGGSDQWGNLTAGLDLIHRVEPAAHVHAMATPLMVKADGTKFGKSESGA 239

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKII 302
           +WL+ EMT+PY F+Q+W N+DD D+ ++ + L+     E++ +     +  ++  A++ +
Sbjct: 240 VWLDPEMTTPYAFYQFWLNVDDRDISTYMRILSFRSREELEELEAQTAERPQMRAAQRAL 299

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQ------HMPTISISKDEVSRGMGLLTLI 356
           A E+TT+VHG ++      A+   F     ++            +    V+    ++ L 
Sbjct: 300 AEELTTLVHGADQCAAVIAASKALFGQGELAELDEATLAAALSELPHARVTELAQVVDLF 359

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            + G   S +  RR +K     +NN  ++ E      +D      + L  GKKN     +
Sbjct: 360 AETGLVASKSAGRRTVKEGGAYVNNVKVTAEDAVPAPEDLLHGRWLVLRRGKKNLAAVEV 419

Query: 417 CG 418
            G
Sbjct: 420 TG 421


>gi|229193348|ref|ZP_04320298.1| Tyrosyl-tRNA synthetase [Bacillus cereus ATCC 10876]
 gi|228590149|gb|EEK48018.1| Tyrosyl-tRNA synthetase [Bacillus cereus ATCC 10876]
          Length = 419

 Score =  491 bits (1265), Expect = e-137,   Method: Composition-based stats.
 Identities = 148/424 (34%), Positives = 221/424 (52%), Gaps = 21/424 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG ++Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  
Sbjct: 2   NIIDELEWRGAVNQQTDEEGLRKLVEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P+ L+GG T  IGDPS R   R++   + +Q N++ +         +G G ++  M+
Sbjct: 62  GHHPVILIGGATGTIGDPSGRQSERQLQTLEVVQHNVDALTAQMKKLFDFG-GNSEVKMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I  I+ LR+ G  FS+N ML+ + V SRL  +  +SF EF Y ILQA DF  
Sbjct: 121 NNYDWTHEINIIEFLRDYGKNFSINSMLAKDIVASRL--DTGISFTEFTYQILQAMDFHH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKLFALTSPLLTTASGTKMGKTLSGA 244
           L    D +LQ+GGSDQWGNI  G+DL  +L+    K+F LT PLL  + GTK GK+  GA
Sbjct: 179 LYTKEDVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSAGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKII 302
           +WL+ E T+P+ F+Q+W N DD DV+ + K  T L    ID +A     E    EA+K++
Sbjct: 239 VWLDSEKTTPFEFYQFWVNTDDRDVIKYLKYFTFLTKERIDELATKVEAEPHKREAQKVL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGL 352
           A E+T  VHG E   +A       F   I S          + MPT   SK+       +
Sbjct: 299 AEEMTKFVHGEEAFLQAEKITAALFSGDIKSLTADEIEQGFKEMPTFQSSKET----KNI 354

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           +  +V  G   S  +AR  + + AI +N   +++    + +++      I +  GKKN+ 
Sbjct: 355 VEWLVDLGIEPSRRQAREDINNGAISMNGEKVTDVGTDVTVENSFDGRFIIIRKGKKNYS 414

Query: 413 ICHL 416
           +  L
Sbjct: 415 LVKL 418


>gi|229164039|ref|ZP_04291976.1| Tyrosyl-tRNA synthetase [Bacillus cereus R309803]
 gi|228619422|gb|EEK76311.1| Tyrosyl-tRNA synthetase [Bacillus cereus R309803]
          Length = 419

 Score =  491 bits (1265), Expect = e-137,   Method: Composition-based stats.
 Identities = 145/420 (34%), Positives = 215/420 (51%), Gaps = 13/420 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG I+Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  
Sbjct: 2   NIIDELDWRGAINQQTDEEGLRKLVEEKQISLYCGVDPTGDSMHIGHLIPFMMMKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P+ L+GG T  IGDPS R   R++   + +Q N++ +         +G G ++  M+
Sbjct: 62  GHHPVILIGGATGTIGDPSGRQSERQLQTLEVVQHNVDALTAQMKKLFDFG-GNSEVKMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I  I+ LR+ G  FS+N ML+ + V SRL  +  +SF EF Y ILQA DF  
Sbjct: 121 NNYDWTHEINIIEFLRDYGKNFSINSMLAKDIVASRL--DTGISFTEFTYQILQAMDFHH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKLFALTSPLLTTASGTKMGKTLSGA 244
           L    D +LQ+GGSDQWGNI  G+DL  +L+    K+F LT PLL  + GTK GK+  GA
Sbjct: 179 LYTKEDVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSAGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKII 302
           +WL+ E T+P+ F+Q+W N DD DVV + K  T L    ID   +         EA+K++
Sbjct: 239 VWLDPEKTTPFEFYQFWVNTDDRDVVKYLKYFTFLTKERIDELVVKVETEPHKREAQKVL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVS------RGMGLLTLI 356
           A E+T  VHG E   +A       F   I S     I     E+           ++  +
Sbjct: 299 AEEMTKFVHGEEAFLQAVKITAALFSGDIKSLTADEIEQGFKEMPTFNSSKETKNIVEWL 358

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V  G   S  +AR  + + AI +N   +++    + +++      I +  GKKN+ +  L
Sbjct: 359 VDLGIEPSRRQAREDINNGAISMNGEKVTDVGTDVTVENSFDGRFIIIRKGKKNYSLVKL 418


>gi|139472959|ref|YP_001127674.1| tyrosyl-tRNA synthetase [Streptococcus pyogenes str. Manfredo]
 gi|189029778|sp|A2RC49|SYY_STRPG RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|134271205|emb|CAM29421.1| putative tyrosyl-tRNA synthetase [Streptococcus pyogenes str.
           Manfredo]
          Length = 418

 Score =  491 bits (1265), Expect = e-137,   Method: Composition-based stats.
 Identities = 145/417 (34%), Positives = 226/417 (54%), Gaps = 11/417 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L  RG + Q ++ + L    ++G V+ Y GYD TA SLH GHL  ++    LQ  
Sbjct: 2   NIFEELKARGLVFQTTDEQALVKALTEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP +L+GG T +IGDPSF+D  R +   + + E  +KIKG  S+F+ +  G   A ++
Sbjct: 62  GHKPYALVGGATGLIGDPSFKDAERSLQTKETVLEWSDKIKGQLSTFLDFENGDNKAELV 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I +ID LR++G +F+VN M+S +SV+ R+  E  +S+ EF Y I+Q YDF E
Sbjct: 122 NNYDWFSQISFIDFLRDVGKYFTVNYMMSKDSVKKRI--ETGISYTEFAYQIMQGYDFYE 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L   ++  LQ+GGSDQWGN+  G +L  +        +T PL+T ++G K GK+   A+W
Sbjct: 180 LNDKHNVTLQIGGSDQWGNMTAGTELLRKKADKTGHVMTVPLITDSTGKKFGKSEGNAVW 239

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIAT 304
           L+ + TSPY  +Q+W N+ D D V F K  T L + EI  +        +E  A+KI+A 
Sbjct: 240 LDADKTSPYEMYQFWLNVMDDDAVRFLKIFTFLSLDEIAEIETQFNAARHERLAQKILAR 299

Query: 305 EITTMVHGREEAEKAATAAMECFDMSI-------HSQHMPTISISKDEVSRGMGLLTLIV 357
           E+ T+VHG E  ++A     + F  +I         Q +  +     +    + L+ ++V
Sbjct: 300 EVVTLVHGEEAYKQALNITEQLFAGNIKNLSANELKQGLSNVPNYHVQSEDSLNLVDMLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            AG + S  +AR  +++ AI IN   + +   Q+   D        +  GKK + + 
Sbjct: 360 TAGISPSKRQAREDVQNGAIYINGDRVQDLDYQLSNDDKTDDQLTVIRRGKKKYAVL 416


>gi|229169791|ref|ZP_04297488.1| Tyrosyl-tRNA synthetase [Bacillus cereus AH621]
 gi|228613641|gb|EEK70769.1| Tyrosyl-tRNA synthetase [Bacillus cereus AH621]
          Length = 420

 Score =  491 bits (1265), Expect = e-137,   Method: Composition-based stats.
 Identities = 148/424 (34%), Positives = 220/424 (51%), Gaps = 21/424 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG ++Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  
Sbjct: 2   NIIDELEWRGAVNQQTDEEGLRKLVEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P+ L+GG T  IGDPS R   R++   + +Q N++ +         +G G ++  M+
Sbjct: 62  GHHPVILIGGATGTIGDPSGRQSERQLQTLEVVQHNVDALTAQMKKLFDFG-GNSEVKMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I  I+ LR+ G  FS+N ML+ + V SRL  +  +SF EF Y ILQA DF  
Sbjct: 121 NNYDWTHKINIIEFLRDYGKNFSINSMLAKDIVASRL--DTGISFTEFTYQILQAMDFHH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKLFALTSPLLTTASGTKMGKTLSGA 244
           L    D +LQ+GGSDQWGNI  G+DL  +L+    K+F LT PLL  + GTK GK+  GA
Sbjct: 179 LYTKEDVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSAGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA--KLQGKEINEAKKII 302
           IWL+ E T+P+ F+Q+W N DD DV+ + K  T L    ID +A          EA+K++
Sbjct: 239 IWLDPEKTTPFEFYQFWVNTDDRDVIKYLKYFTFLTKERIDELAVKVETEPHKREAQKVL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGL 352
           A E+T  VHG E   +A       F   I S          + MPT   SK+       +
Sbjct: 299 AEEMTKFVHGEEAFLQAVKITAALFSGDIKSLTADEIEQGFKEMPTFQSSKET----KNI 354

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           +  +V  G   S  +AR  + + AI +N   +++    + +++      I +  GKKN+ 
Sbjct: 355 VEWLVDLGIEPSRRQAREDINNGAISMNGEKVTDVSRDVTVENSFDGRFIIIRKGKKNYS 414

Query: 413 ICHL 416
           +  L
Sbjct: 415 LVEL 418


>gi|325281475|ref|YP_004254017.1| Tyrosyl-tRNA synthetase [Odoribacter splanchnicus DSM 20712]
 gi|324313284|gb|ADY33837.1| Tyrosyl-tRNA synthetase [Odoribacter splanchnicus DSM 20712]
          Length = 430

 Score =  491 bits (1265), Expect = e-137,   Method: Composition-based stats.
 Identities = 162/428 (37%), Positives = 232/428 (54%), Gaps = 22/428 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG IH I    E   L ++G  TAY+G D TA SLH GHL  +M++   Q  
Sbjct: 2   NFVDELKWRGMIHDIMPGTE--ELLAKGQTTAYVGIDPTADSLHVGHLVSVMMMKHFQMA 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA-LM 125
           GHKPI ++GG T +IGDPS + + R ++  + I++N+  IK   S FI + +  ++A +M
Sbjct: 60  GHKPIFIIGGATGMIGDPSGKSQERNLLDEETIRKNMAGIKAQLSRFIDFNSTASNAAIM 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQAYD 183
           LNN  W+    ++D +REIG   +VN M++ +SV+ RL  E  Q +SF EF Y ++Q YD
Sbjct: 120 LNNYDWMKQFSFLDFIREIGKHITVNYMMAKDSVKKRLSSESAQGMSFTEFTYQLVQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ L KNY C LQMGGSDQWGNI  G +L  R +    + LT PL+T + G K GKT SG
Sbjct: 180 FLHLRKNYGCMLQMGGSDQWGNITTGGELIRRKEGLDAYGLTWPLMTKSDGKKFGKTESG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKI 301
            IWL+ E TSPY F+Q+W N  D D   + K  T LP + ID       +   + + +K 
Sbjct: 240 NIWLDPERTSPYKFYQFWLNTTDEDAARYVKIFTILPPARIDALIAEHREAPHLRKLQKT 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDEVS 347
           +A EIT ++HG E    A  A+   F  +                 + +P   I+  ++ 
Sbjct: 300 LAKEITCLIHGEEAYNLALEASQILFGNATSETLRKIDENTFLSVFEGVPQYEIAAADLK 359

Query: 348 RGMGLLTLIV-KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+ ++  +  K    +S  EARR LKSNAI IN   +  E+  I          I    
Sbjct: 360 AGISIVDFLADKTAIMSSKGEARRALKSNAIGINKEKVQGEETIIGESHLIDGKYILAQS 419

Query: 407 GKKNHIIC 414
           GKKN+ + 
Sbjct: 420 GKKNYFLV 427


>gi|25028096|ref|NP_738150.1| tyrosyl-tRNA synthetase [Corynebacterium efficiens YS-314]
 gi|259505648|ref|ZP_05748550.1| tyrosine--tRNA ligase [Corynebacterium efficiens YS-314]
 gi|81750575|sp|Q8FTM1|SYY_COREF RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|23493380|dbj|BAC18350.1| putative tyrosyl-tRNA synthetase [Corynebacterium efficiens YS-314]
 gi|259166779|gb|EEW51333.1| tyrosine--tRNA ligase [Corynebacterium efficiens YS-314]
          Length = 421

 Score =  491 bits (1265), Expect = e-137,   Method: Composition-based stats.
 Identities = 142/422 (33%), Positives = 227/422 (53%), Gaps = 15/422 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           ++ +  LS RG I+Q ++   L    +Q  +T Y G+D T  SLHAGHL  L++L   Q+
Sbjct: 3   TNIIDELSWRGLINQSTDLDALREA-TQEPITLYCGFDPTGPSLHAGHLVPLLMLRRFQQ 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH PI L GG T +IGDP    E R M  +  + E  E+I    S F+ +  G+  A +
Sbjct: 62  AGHNPIVLAGGATGMIGDPRDVGE-RTMNSADTVAEWAERISDQLSRFVDF-EGEHAARL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  W  ++  +  LR++G  F +N ML+ ++V+ RL+ +  +S+ EF+YM+LQA DFV
Sbjct: 120 VNNAEWTNNMSVVTFLRDVGKHFPLNTMLARDTVKRRLETD-GISYTEFSYMLLQANDFV 178

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT-LSGA 244
           EL + ++C LQ+GG DQWGNI+ G+DL  R++   +  +T PL+T + G K GK+   G+
Sbjct: 179 ELNRRFNCILQVGGGDQWGNIVSGVDLNRRVQGKSVHGITVPLVTDSEGKKFGKSTGGGS 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKII 302
           +WL+ EMTSPY+++QY+ N  DADV+ + +  T L   E+D +     +     EA++ +
Sbjct: 239 LWLDPEMTSPYSWYQYFINAADADVIRYLRWFTFLTKEELDELEVEVAERPFKREAQRRL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECF--------DMSIHSQHMPTISISKDEVSRGMGLLT 354
           A E+T +VHG E       AA   F        D       +    +++ +      ++ 
Sbjct: 299 AREMTNLVHGEEATAAVELAAQALFGRAELRDLDEKTLEASVSETEVAEIQPGEPRTIVD 358

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           L++ +G   S   ARR +      +NN  I+ +  +    D      + L  GKKN    
Sbjct: 359 LLIASGLVDSRGAARRTISEGGAYVNNERITADDWEPSESDLLHGQWLVLRKGKKNFAGV 418

Query: 415 HL 416
            +
Sbjct: 419 KI 420


>gi|315924164|ref|ZP_07920390.1| tyrosine--tRNA ligase [Pseudoramibacter alactolyticus ATCC 23263]
 gi|315622566|gb|EFV02521.1| tyrosine--tRNA ligase [Pseudoramibacter alactolyticus ATCC 23263]
          Length = 413

 Score =  491 bits (1265), Expect = e-137,   Method: Composition-based stats.
 Identities = 173/403 (42%), Positives = 244/403 (60%), Gaps = 7/403 (1%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG I Q+++  ++  L   G    YIG+D TA SLH GH   L L+  LQ+ G
Sbjct: 9   IYEELVARGLIAQVTDEPQIKELIDNGGAKFYIGFDPTADSLHVGHFMALCLMRRLQQAG 68

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           ++P+ L+GGGT+ IGDPS R + R+MM ++ I  N+   K   S FI++G  K  A++++
Sbjct: 69  NRPVVLIGGGTAHIGDPSGRTDLRQMMTTETIAHNVACFKKQMSRFIEFGEDK--AILVD 126

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  + Y+D +R+IG+ FSVN ML  E  + RL  E+ LSFLEFNYMI+QAYDF  L
Sbjct: 127 NADWLLDLNYVDTIRDIGAHFSVNNMLRAECYKQRL--EKGLSFLEFNYMIMQAYDFYHL 184

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            K Y   +Q GG+DQW N++ G +L  R      +A+T  LL  + G KMGKT  GA+WL
Sbjct: 185 HKAYGVNMQFGGNDQWSNMLAGTELIRRKLGEDAYAMTITLLLNSEGKKMGKTAKGAVWL 244

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           + + TSP++F+QYWRN+DDADV+   K LT LP+ EI+ MA      INE K+I+A E+T
Sbjct: 245 DPDKTSPFDFYQYWRNVDDADVMKCLKMLTFLPLDEIEAMANWPDNRINEEKEILAYELT 304

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV-SRGMGLLTLIVKAGFATSTN 366
            +VHG EEA+KA   A   F  S     MPT  I +D +    +GL+ L+V  G A S +
Sbjct: 305 ALVHGEEEAKKAQHTAKSLFAGSGSDADMPTSEIGEDVLTEDAIGLIDLLVATGLAPSKS 364

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
           EARR +K N I ++   ++++   I  +   +   I +  GKK
Sbjct: 365 EARRLIKQNGISVDGVKVNDQNASIGRERLMAG--ITVKKGKK 405


>gi|260576399|ref|ZP_05844390.1| tyrosyl-tRNA synthetase [Rhodobacter sp. SW2]
 gi|259021470|gb|EEW24775.1| tyrosyl-tRNA synthetase [Rhodobacter sp. SW2]
          Length = 416

 Score =  491 bits (1265), Expect = e-137,   Method: Composition-based stats.
 Identities = 197/410 (48%), Positives = 275/410 (67%), Gaps = 2/410 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KSDFL ++  RGF+   ++ +  D    +GVV  YIG+D TA SLH G L Q+M+L WLQ
Sbjct: 6   KSDFLHVMMSRGFLADCTDYQGFDDALVKGVVPGYIGFDATAKSLHVGSLIQIMMLRWLQ 65

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           KTGHKPI LMGGGT+ +GDPSFR + R ++   +I ENI  I+ +F++++ +G G  DAL
Sbjct: 66  KTGHKPIVLMGGGTTKVGDPSFRADERPLLSPAQIDENIAGIRAVFANYVTFGNGPQDAL 125

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M+NN  WL ++ Y+D LR+IG  FS+NRML+FESV+SRL REQSLSFLEFNYMILQAYDF
Sbjct: 126 MVNNAEWLDALNYLDFLRDIGRHFSINRMLAFESVKSRLDREQSLSFLEFNYMILQAYDF 185

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL + Y C +QMGGSDQWGNI+ GIDL  R+   +++ LTSPLLTT+ G KMGK+ SGA
Sbjct: 186 LELNRRYGCLVQMGGSDQWGNIVNGIDLTRRVLDTQIYGLTSPLLTTSDGKKMGKSQSGA 245

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WLN +M SPY FWQ+WRN  DADV  F K  T LP+ E +R+  L G EIN AK ++A 
Sbjct: 246 VWLNADMLSPYEFWQFWRNTTDADVGRFLKLYTELPLEECERLGALAGSEINAAKIVLAN 305

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
            +TT+ HG E    A   A E F+       +PT+ ++ +++  G+ +  L V++G A S
Sbjct: 306 AVTTLCHGAEATLAAEATAREVFEKGGVGDDLPTLLLNAEDMGDGISVAQLFVRSGLAKS 365

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
             +A+R +     ++N+ ++ +  + +          +KL+ G+K H + 
Sbjct: 366 GKDAKRLIAEGGARLNDELVLDPGMVLHASALAEP--VKLTAGRKRHALV 413


>gi|50913475|ref|YP_059447.1| tyrosyl-tRNA synthetase [Streptococcus pyogenes MGAS10394]
 gi|81372489|sp|Q5XE99|SYY_STRP6 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|50902549|gb|AAT86264.1| Tyrosyl-tRNA synthetase [Streptococcus pyogenes MGAS10394]
          Length = 418

 Score =  491 bits (1265), Expect = e-137,   Method: Composition-based stats.
 Identities = 144/417 (34%), Positives = 225/417 (53%), Gaps = 11/417 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L  RG + Q ++ + L    ++G V+ Y GYD TA SLH GHL  ++    LQ  
Sbjct: 2   NIFEELKARGLVFQTTDEQALVKALTEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP +L+GG T +IGDPSF+D  R +   + + E  +KIKG  S+F+ +  G   A ++
Sbjct: 62  GHKPYALVGGATGLIGDPSFKDAERSLQTKETVLEWSDKIKGQLSAFLDFENGDNKAELV 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I +ID LR++G +F+VN M+S +SV+ R+  E  +S+ EF Y I+Q YDF E
Sbjct: 122 NNYDWFSQISFIDFLRDVGKYFTVNYMMSKDSVKKRI--ETGISYTEFAYQIMQGYDFYE 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L   ++  LQ+GGSDQWGN+  G +L  +        +T PL+T ++G K GK+   A+W
Sbjct: 180 LNDKHNVTLQIGGSDQWGNMTAGTELLRKKADKTGHVMTVPLITDSTGKKFGKSEGNAVW 239

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIAT 304
           L+ + TSPY  +Q+W N+ D D V F K  T L + EI  +        +E  A+K +A 
Sbjct: 240 LDADKTSPYEMYQFWLNVMDDDAVRFLKIFTFLSLDEIAEIETQFNAARHERLAQKTLAR 299

Query: 305 EITTMVHGREEAEKAATAAMECFDMSI-------HSQHMPTISISKDEVSRGMGLLTLIV 357
           E+ T+VHG E  ++A     + F  +I         Q +  +     +    + L+ ++V
Sbjct: 300 EVVTLVHGEEAYKQALNITEQLFAGNIKNLSANELKQGLSNVPNYHVQSEDSLNLVDMLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            AG + S  +AR  +++ AI IN   + +   Q+   D        +  GKK + + 
Sbjct: 360 TAGISPSKRQAREDVQNGAIYINGDRVQDLDYQLSNDDKIDDQLTVIRRGKKKYAVL 416


>gi|228993787|ref|ZP_04153692.1| Tyrosyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442]
 gi|228765998|gb|EEM14647.1| Tyrosyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442]
          Length = 420

 Score =  491 bits (1264), Expect = e-137,   Method: Composition-based stats.
 Identities = 146/424 (34%), Positives = 218/424 (51%), Gaps = 21/424 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  R  I+Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  
Sbjct: 2   NIIDELEWRDAINQQTDADGLRELVEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P+ L+GG T  IGDPS R   R++   +++Q N++ +         +G G ++  M+
Sbjct: 62  GHHPVILIGGATGTIGDPSGRQTERQLQTLEQVQHNVDALTAQMQKLFDFG-GNSEVKMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I  I+ LR+ G  FS+N ML+ + V SRL  +  +SF EF Y ILQA DF  
Sbjct: 121 NNYDWTHQINIIEFLRDYGKNFSINSMLAKDIVASRL--DTGISFTEFTYQILQAMDFHH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKLFALTSPLLTTASGTKMGKTLSGA 244
           L K    +LQ+GGSDQWGNI  G+DL  +L+    K+F LT PLL  + GTK GK+  GA
Sbjct: 179 LYKEEGVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSAGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKII 302
           +WL+ E T+P+ F+Q+W N DD DVV + K  T L    ID   +         EA+K++
Sbjct: 239 VWLDPEKTTPFEFYQFWVNTDDRDVVKYLKYFTFLTKDRIDELVVKVQTEPHKREAQKVL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGL 352
           A E+T  VHG     +A       F   I S          + MPT   SK+       +
Sbjct: 299 AEEMTKFVHGEHALSQALKITEALFSGDIKSLTADEIEQGFKDMPTFHASKET----KNI 354

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           +  +V  G   S  +AR  + + AI +N   +++    + +++      I +  GKKN+ 
Sbjct: 355 VEWLVDLGIEPSRRQAREDINNGAISMNGEKVTDVNTHVTVENSFDGRFIIIRKGKKNYS 414

Query: 413 ICHL 416
           +  L
Sbjct: 415 LVKL 418


>gi|111017956|ref|YP_700928.1| tyrosyl-tRNA synthetase [Rhodococcus jostii RHA1]
 gi|110817486|gb|ABG92770.1| tyrosine--tRNA ligase [Rhodococcus jostii RHA1]
          Length = 429

 Score =  491 bits (1264), Expect = e-137,   Method: Composition-based stats.
 Identities = 145/421 (34%), Positives = 226/421 (53%), Gaps = 13/421 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L+ RG I Q ++   L      G VT Y G+D T  SLHAGHL  L+ L   Q+ 
Sbjct: 8   NIIDELTWRGLIAQSTDLDALRRDLDAGPVTLYAGFDPTGPSLHAGHLVPLLALKRFQRA 67

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           G++PI L GG T +IGDP    E R M  +  + E  ++I+G    F+ +    + A++ 
Sbjct: 68  GNRPIVLAGGATGLIGDPRDVGE-RTMNSADTVAEWADRIRGQLERFVDFDESPSGAIIE 126

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   +  ID LR++G  FSVN ML+ ++V+ RL+ +  +S+ EF+YM+LQA D++ 
Sbjct: 127 NNMNWTGKLSAIDFLRDVGKHFSVNVMLARDTVKRRLESD-GMSYTEFSYMLLQANDYLH 185

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT-LSGAI 245
           L +++ C LQ+GGSDQWGNII G++L  R+    +  LT PL+T+A G K GK+   G++
Sbjct: 186 LRRSHGCSLQVGGSDQWGNIIAGVELNRRIDAESVHGLTVPLVTSADGKKFGKSTGGGSL 245

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIA 303
           WL++EMTSPY ++QY+ N  DADV+ + +  T L   E+     A  +     EA++ +A
Sbjct: 246 WLDQEMTSPYAWYQYFVNTGDADVIKYLRWFTFLTAEELAELETATAERPHAREAQRRLA 305

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQ--------HMPTISISKDEVSRGMGLLTL 355
            E+TT+VHG         A+   F  +             +   S+++       G++ L
Sbjct: 306 AEMTTLVHGEANTRAVELASQALFGRAELQDLDEPTLGAALREASVAELAPGEPAGIVDL 365

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +V +G   S   ARR +K     +NN  IS+E       D      + +  GK+N     
Sbjct: 366 LVLSGLCESKGAARRTVKEGGASVNNQKISSEDWTPAPTDLLHGTWLVIRRGKRNFAGIK 425

Query: 416 L 416
           +
Sbjct: 426 V 426


>gi|251780345|ref|ZP_04823265.1| tyrosine--tRNA ligase [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
 gi|243084660|gb|EES50550.1| tyrosine--tRNA ligase [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
          Length = 406

 Score =  491 bits (1264), Expect = e-137,   Method: Composition-based stats.
 Identities = 176/411 (42%), Positives = 255/411 (62%), Gaps = 7/411 (1%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           ++ L  L +RG+I Q ++  E   L     VT YIG+D TA SLH GH   +M +  +Q+
Sbjct: 2   ANVLDELLDRGYIKQFTHEEETRKLLGNEKVTFYIGFDPTADSLHVGHFIAMMFMAHMQR 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+PI+L+GGGT+++GDPS + + R+M+  ++IQ N++ IK     FI +   K  AL+
Sbjct: 62  AGHRPIALLGGGTAMVGDPSGKTDMRKMLTKEQIQHNVDSIKKQMERFIDFSDDK--ALI 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  WL  + Y+D LRE+G  FSVNRMLS E  + RL  E+ LSFLEFNYM++Q YDF 
Sbjct: 120 VNNADWLLDLNYVDFLREVGVHFSVNRMLSAECFKQRL--EKGLSFLEFNYMLMQGYDFY 177

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L + Y C++++GG DQW N+I G++L  R       A+T  LLT + G KMGKT+ GA+
Sbjct: 178 VLNQKYGCKMELGGDDQWSNMIAGVELVRRKAQGDAMAMTCTLLTNSQGQKMGKTVGGAL 237

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
           WL+ +  SP++F+QYWRN+DDADV      LT LPM E+ R+  L+G EIN AKKI+A E
Sbjct: 238 WLDADKVSPFDFYQYWRNVDDADVEKCLALLTFLPMDEVRRLGALEGAEINGAKKILAFE 297

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           +T +VHG EEA+KA  AA   F       ++PT++I K+++  G  +L +I K     S 
Sbjct: 298 VTKLVHGEEEAKKAEEAANALFSGGADMSNVPTVTIVKEDL--GSTVLDIIAKTKIVPSK 355

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            E RR ++   + IN   I++    +   DF   G+  +  GKKN+    +
Sbjct: 356 KEGRRLIEQGGLSINGEKITDLTRTLNEDDF-KDGSALIKRGKKNYNKIEI 405


>gi|167763943|ref|ZP_02436070.1| hypothetical protein BACSTE_02326 [Bacteroides stercoris ATCC
           43183]
 gi|167698059|gb|EDS14638.1| hypothetical protein BACSTE_02326 [Bacteroides stercoris ATCC
           43183]
          Length = 430

 Score =  491 bits (1264), Expect = e-137,   Method: Composition-based stats.
 Identities = 150/428 (35%), Positives = 227/428 (53%), Gaps = 22/428 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG +H +    E   L ++  VTAYIG+D TA SLH GHL  +M+L   Q+ 
Sbjct: 2   NFVEELKWRGMLHDMMPGTE--ELLAKEQVTAYIGFDPTADSLHIGHLCSVMILRHFQRC 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG-TGKTDALM 125
           GHKP++L+GG T +IGDPS +   R ++  + +Q N+  +K   S F+ +       A +
Sbjct: 60  GHKPLALIGGATGMIGDPSGKSAERNLLTEETLQRNMAGMKKQLSKFLDFDSDAPNRAEL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQAYD 183
           +NN  W+    ++D  RE+G   +VN M++ +SV+ RL  E    LSF EF Y +LQ YD
Sbjct: 120 VNNYDWMKDFSFLDFAREVGKHITVNYMMAKDSVKKRLNGEARDGLSFTEFTYQLLQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ L +   C+LQMGGSDQWGNI  G +L  R    ++FALTSPL+T A G K GKT SG
Sbjct: 180 FLHLYETKGCKLQMGGSDQWGNITTGAELIRRTNGGEVFALTSPLITKADGGKFGKTESG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKKI 301
            IWL+   TSPY F+Q+W N+ DAD   + K  T+L   EI+ +         +   +K 
Sbjct: 240 NIWLDPRYTSPYKFYQFWLNVSDADAARYIKIFTSLSREEIEALTAEHEAAPHLRVLQKR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDEVS 347
           +A E+T MVH  E+   A  A+   F  +                 + +P   +S+D ++
Sbjct: 300 LAKEVTIMVHSEEDYNAAVDASNILFGNATSEALKKLDEDTLLAVFEGVPQFEVSRDALA 359

Query: 348 RGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+  + L V  A    S  E R+ ++   + +N   ++     +   D      + +  
Sbjct: 360 AGVKAVDLFVDNAAVFASKGEMRKLVQGGGVSLNKEKLAAFDQVVTTADLLDDKYLLVQR 419

Query: 407 GKKNHIIC 414
           GKKN+ + 
Sbjct: 420 GKKNYYLI 427


>gi|289423529|ref|ZP_06425330.1| tyrosine--tRNA ligase [Peptostreptococcus anaerobius 653-L]
 gi|289156031|gb|EFD04695.1| tyrosine--tRNA ligase [Peptostreptococcus anaerobius 653-L]
          Length = 407

 Score =  491 bits (1264), Expect = e-136,   Method: Composition-based stats.
 Identities = 172/397 (43%), Positives = 247/397 (62%), Gaps = 5/397 (1%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
                L  RG + Q+++  E+  L + G    Y+G+D TA SLH GH   L L+  LQ  
Sbjct: 2   GIYEELLARGLVAQVTDEEEIRELVNTGKAKFYLGFDPTADSLHVGHFMALCLMRRLQMA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           G+ P+ L+GGGT  IGDPS R + R+MM  + IQ N +  K   S FI++G GK   +M+
Sbjct: 62  GNTPVVLVGGGTGYIGDPSGRTDMRQMMTPETIQHNCDCFKVQMSKFIEFGEGKG--IMV 119

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  + YID+LRE+G  FSVN ML  E  ++R+  E+ LSFLEFNYM++Q+YDF  
Sbjct: 120 NNADWLLQLNYIDMLREVGPHFSVNNMLRAECYKNRM--EKGLSFLEFNYMVMQSYDFYH 177

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L K   C +Q+GG DQW N++ G DL  R      FA+T PLLT A GTKMGKT  GA+W
Sbjct: 178 LYKELGCNMQLGGDDQWSNLLGGTDLIRRKTGANAFAMTIPLLTKADGTKMGKTAGGAVW 237

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           L+   TSP++F+QYWRN+DDADVV+F K+LT L + EI  M   +G ++NEAK+++A E+
Sbjct: 238 LDPNKTSPFDFYQYWRNVDDADVVNFIKKLTFLSLEEIKPMESWEGAKLNEAKELLAYEM 297

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATST 365
           T++VH +EEA+KA  A+   F   + S +MPT  +   ++  G + L  L+++ G A + 
Sbjct: 298 TSLVHSKEEADKAQEASRALFRGGVDSANMPTTELDSSKLVDGSIALDELMIEIGLAPTK 357

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNI 402
           +E RR ++   + +N+S+  + K+ I   D      I
Sbjct: 358 SEVRRLVQQGGVSVNDSVADDCKMAITEADLRDGVTI 394


>gi|70726193|ref|YP_253107.1| tyrosyl-tRNA synthetase [Staphylococcus haemolyticus JCSC1435]
 gi|97202120|sp|Q4L774|SYY_STAHJ RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|68446917|dbj|BAE04501.1| tyrosyl-tRNA synthetase [Staphylococcus haemolyticus JCSC1435]
          Length = 420

 Score =  491 bits (1264), Expect = e-136,   Method: Composition-based stats.
 Identities = 148/421 (35%), Positives = 229/421 (54%), Gaps = 20/421 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            +  L  RG I+Q ++   ++ L ++  ++ Y G D TA SLH GHL   M L   Q+ G
Sbjct: 5   LIEELQWRGLIYQQTDESSIEELLNKEQISLYCGADPTADSLHIGHLLPFMTLRRFQEHG 64

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+PI L+GGGT +IGDPS + E R +    +++ N+E I        ++GT K  A+++N
Sbjct: 65  HRPIVLIGGGTGMIGDPSGKSEERILQTEDQVEANVEGISAQMHKLFEFGTDKG-AILVN 123

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N+ WL  I  I  LR+ G    VN ML  +S++SRL  E  +S+ EF Y ILQA DF  L
Sbjct: 124 NKDWLSQISLISFLRDYGKHVGVNYMLGKDSIQSRL--ENGISYTEFTYTILQAIDFGHL 181

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLG-ERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
            +  +C+LQ+GGSDQWGNI  GI+L        + + LT PL+T + G K GK+ SGA+W
Sbjct: 182 NRELNCKLQVGGSDQWGNITSGIELMRRMYGQTEAYGLTIPLVTKSDGKKFGKSESGAVW 241

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA--KLQGKEINEAKKIIAT 304
           L+ + TSPY F+Q+W N  D DV+ F K  T L   EI+R+   K Q   + EA+K +A 
Sbjct: 242 LDADKTSPYEFYQFWINQSDDDVIKFLKYFTFLDKDEINRLEESKNQEPHLREAQKALAE 301

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLT 354
            +T  +HG+E  + A   +   F   + S          + +P + +S    +    ++ 
Sbjct: 302 NVTEFIHGKEALDDAIRISKALFSGDLKSLSGKELKEGFKDVPQVELS----TETSNIID 357

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           ++++ G ATS  +AR  + + AI IN     +   ++  +D        +  GKK + + 
Sbjct: 358 VLIETGIATSKRQAREDVNNGAIYINGERQQSVDYELSNEDKIDDEFTIIRRGKKKYFMV 417

Query: 415 H 415
           +
Sbjct: 418 N 418


>gi|258424143|ref|ZP_05687025.1| tyrosyl-tRNA synthetase [Staphylococcus aureus A9635]
 gi|257845764|gb|EEV69796.1| tyrosyl-tRNA synthetase [Staphylococcus aureus A9635]
          Length = 420

 Score =  491 bits (1264), Expect = e-136,   Method: Composition-based stats.
 Identities = 148/421 (35%), Positives = 227/421 (53%), Gaps = 20/421 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            +  L  RG I+Q ++ + ++ L ++  VT Y G D TA SLH GHL   + L   Q+ G
Sbjct: 5   LIEDLKWRGLIYQQTDEQGIEDLLNKEQVTLYCGADPTADSLHIGHLLPFLTLRRFQEHG 64

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+PI L+GGGT +IGDPS + E R +   +++ +NIE I     +  ++GT    A+++N
Sbjct: 65  HRPIVLIGGGTGMIGDPSGKSEERVLQTEEQVDKNIEGISKQMHNIFEFGTDHG-AVLVN 123

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  I  I  LR+ G    VN ML  +S++SRL  E  +S+ EF Y ILQA DF  L
Sbjct: 124 NRDWLGQISLISFLRDYGKHVGVNYMLGKDSIQSRL--EHGISYTEFTYTILQAIDFGHL 181

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLG-ERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
            +  +C++Q+GGSDQWGNI  GI+L          + LT PL+T + G K GK+ SGA+W
Sbjct: 182 NRELNCKIQVGGSDQWGNITSGIELMRRMYGQTDAYGLTIPLVTKSDGKKFGKSESGAVW 241

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA--KLQGKEINEAKKIIAT 304
           L+ E TSPY F+Q+W N  D DV+ F K  T L   EIDR+   K +   + EA+K +A 
Sbjct: 242 LDAEKTSPYEFYQFWINQSDEDVIKFLKYFTFLGKEEIDRLEQSKNEAPHLREAQKTLAE 301

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLT 354
           E+T  +HG E    A   +   F   + S          + +P +++S    +    ++ 
Sbjct: 302 EVTKFIHGEEALNDAIRISQALFSGDLKSLSAKELKDGFKDVPQVTLS----NGTTNIID 357

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           ++++ G + S  +AR  + + AI IN     +   ++   D   +    +  GKK   + 
Sbjct: 358 VLIETGVSPSKRQAREDVNNGAIYINGERQQDVNYELTSDDKIDSEFTIIRRGKKKCFMV 417

Query: 415 H 415
           +
Sbjct: 418 N 418


>gi|190571260|ref|YP_001975618.1| tyrosyl-tRNA synthetase [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
 gi|254765188|sp|B3CM50|SYY_WOLPP RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|190357532|emb|CAQ54969.1| tyrosyl-tRNA synthetase [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
          Length = 420

 Score =  491 bits (1264), Expect = e-136,   Method: Composition-based stats.
 Identities = 205/415 (49%), Positives = 287/415 (69%), Gaps = 2/415 (0%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQ-GVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
            KS+FL+ + ERG+++Q +N   LD L SQ   + AYIG+D TA SLH G L Q+M+L  
Sbjct: 3   HKSEFLNFIQERGYLYQCTNIDRLDQLLSQDNYIIAYIGFDCTAPSLHIGSLIQIMMLRH 62

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD 122
           LQK G+KPI L+GGGT+ IGDPS +D++R ++  ++I +NI  IK      I +  GKT 
Sbjct: 63  LQKFGYKPIVLLGGGTTKIGDPSGKDKARSVLPIEDINQNILGIKKTLEKMISFDYGKTG 122

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
           A+++NN  WL +IKYID LR+IG+ FSVNRML F+SV+ RL REQ+LSFLEFNYM+LQAY
Sbjct: 123 AIIVNNADWLDNIKYIDFLRDIGTHFSVNRMLGFDSVKIRLDREQNLSFLEFNYMLLQAY 182

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DFVEL K Y CR Q+GGSDQWGNI+ GI+L ++L  P+LF LT+PLL  A G KMGKT S
Sbjct: 183 DFVELNKKYGCRFQIGGSDQWGNIVNGIELSKKLNLPELFGLTTPLLLNAQGKKMGKTES 242

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKII 302
           GA+WL+  M + Y++WQY+RN+DD DV  F +  T LP+ EI ++  L+ +E NEAKK++
Sbjct: 243 GAVWLDGSMLNSYDYWQYFRNVDDQDVGRFLRLFTDLPIDEIKKLESLKDQETNEAKKVL 302

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFA 362
           ATE+T + HG +EAE A +AA+  F+ +  S  +   +I+K++++ G+ L+ L+   GF 
Sbjct: 303 ATEVTKICHGCKEAELARSAAISAFE-NEDSSLLSGYTITKEQIANGIPLIDLLYDTGFE 361

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            S   A+R ++ N  K+N++ I++    I  + F     IKLS GKK HI   + 
Sbjct: 362 PSKGAAKRLIQGNGCKVNDNTINDVNYTINSESFKGQPFIKLSAGKKRHIKILVS 416


>gi|299143869|ref|ZP_07036949.1| tyrosine--tRNA ligase [Peptoniphilus sp. oral taxon 386 str. F0131]
 gi|298518354|gb|EFI42093.1| tyrosine--tRNA ligase [Peptoniphilus sp. oral taxon 386 str. F0131]
          Length = 408

 Score =  491 bits (1264), Expect = e-136,   Method: Composition-based stats.
 Identities = 175/411 (42%), Positives = 257/411 (62%), Gaps = 5/411 (1%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
            +   IL ERGFI Q + P EL  L S+  V  YIG+D TA SL  GH  Q+ ++  +Q 
Sbjct: 2   KNVYDILEERGFIDQATYPEELKELLSKESVPFYIGFDATADSLTLGHFLQVRVMQHMQL 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKPI+L+GGGT++IGDPS + + R++M  + I+ N  + K   S F+ +   K  A+ 
Sbjct: 62  AGHKPIALLGGGTTMIGDPSGKTDMRKIMTKETIEYNAGRFKEQLSHFLDFSDDK--AIF 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  WL ++ ++D +REIG  FSVNRML+F+  ++R+  E+ L+F EF YM++Q+YDF+
Sbjct: 120 VNNADWLLNLNFLDFMREIGVHFSVNRMLTFDCYKNRM--EKGLTFFEFAYMLMQSYDFL 177

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L + Y C+L++GGSDQW N++ G +L  +L+  K++++T  LLTTA+G KMGKT  GA+
Sbjct: 178 VLYRKYGCKLELGGSDQWSNMLGGYELVRKLEDDKVYSMTFKLLTTAAGIKMGKTEKGAV 237

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
           WL+   TSPY  +QY RN DD DV+ F K LT LPM EI +   L+G E+N AK+++A E
Sbjct: 238 WLDASKTSPYEMYQYMRNSDDRDVIKFMKLLTMLPMEEIAKYESLEGAELNTAKEVLAYE 297

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           I   VHG EEA+KA  AA   F   I+S+++P+  IS  E   G  ++ L+ +     S 
Sbjct: 298 IVKDVHGEEEAKKAMDAAKSLFSGGINSENIPSTEISSSEFENGKNIVELLKELNLIKSN 357

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +E RR ++ N I I++  +      + L DF   G I +  GKK +    L
Sbjct: 358 SEGRRLIEQNGITIDDEKVKTFDQMLSLSDF-KDGKILIRKGKKVYHQVKL 407


>gi|120404269|ref|YP_954098.1| tyrosyl-tRNA synthetase [Mycobacterium vanbaalenii PYR-1]
 gi|119957087|gb|ABM14092.1| tyrosyl-tRNA synthetase [Mycobacterium vanbaalenii PYR-1]
          Length = 424

 Score =  491 bits (1264), Expect = e-136,   Method: Composition-based stats.
 Identities = 146/424 (34%), Positives = 229/424 (54%), Gaps = 13/424 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +  L  L  RG I Q ++   L    ++G VT Y G+D TA SLHAGHL  L+ L   Q+
Sbjct: 3   TSILDELEWRGLIAQSTDRDALAEALAEGPVTVYSGFDPTAPSLHAGHLIPLLTLRRFQQ 62

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+PI L GG T +IGDP    E R +  +  + +   +I+G    F+++    T A++
Sbjct: 63  AGHRPIVLAGGATGMIGDPRDVGE-RTLNTADTVADWAGRIRGQLERFVEFDDSPTGAVV 121

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
            NN +W   +  I+ LR++G  FSVN ML  ++VR RL+  + +S+ EF+YM+LQA D+V
Sbjct: 122 ANNLSWTGELSAIEFLRDVGKHFSVNVMLDRDTVRRRLE-GEGISYTEFSYMLLQANDYV 180

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT-LSGA 244
           EL + Y C LQ+GGSDQWGNII G+ L  +     + ALT+PL+T + G K GK+   G+
Sbjct: 181 ELHQRYGCTLQVGGSDQWGNIIAGVRLVRQKAGASVHALTTPLVTDSEGKKFGKSTGGGS 240

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKII 302
           +WL+ EMTSPY ++QY+ N  DADV+ + +  T L   E+  + +   +  +E  A++ +
Sbjct: 241 LWLDPEMTSPYAWYQYFINTADADVLPYLRWFTFLSADELVELEQATTERPHERAAQRRL 300

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQ--------HMPTISISKDEVSRGMGLLT 354
           A E+T +VHG         A+   F  +   +         +   S+++        ++ 
Sbjct: 301 ARELTNLVHGEAATAAVELASQALFGRAELGELDEPTLAAALREASVAQLAPGGPDSIID 360

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           L+V +G + S   ARR +      +NN  I+ ++   +  DF     + L  GK+N    
Sbjct: 361 LLVASGLSASKGAARRTVAEGGAYVNNVKIATDEWIPQASDFLHDRWLVLRRGKRNIAGI 420

Query: 415 HLCG 418
              G
Sbjct: 421 ERVG 424


>gi|255010298|ref|ZP_05282424.1| tyrosyl-tRNA synthetase [Bacteroides fragilis 3_1_12]
 gi|313148097|ref|ZP_07810290.1| tyrosyl-tRNA synthetase [Bacteroides fragilis 3_1_12]
 gi|313136864|gb|EFR54224.1| tyrosyl-tRNA synthetase [Bacteroides fragilis 3_1_12]
          Length = 430

 Score =  491 bits (1264), Expect = e-136,   Method: Composition-based stats.
 Identities = 149/428 (34%), Positives = 226/428 (52%), Gaps = 22/428 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG +H +    E   L ++  VTAY+G D TA SLH GHL  +M+L   Q+ 
Sbjct: 2   NFVEELRWRGMVHDMMPGTE--ELLAKEQVTAYLGIDPTADSLHIGHLCGVMILRHFQRC 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG-KTDALM 125
           GHKP++L+GG T +IGDPS +   R ++  + ++ N   IK   + F+ + +     A +
Sbjct: 60  GHKPLALIGGATGMIGDPSGKSAERNLLDEETLRHNQACIKKQLAKFLDFESDVPNRAEL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQAYD 183
           +NN  W+    ++D +RE+G   +VN M++ ESV+ RL  E    LSF EF Y +LQ YD
Sbjct: 120 VNNYDWMKEFSFLDFVREVGKHITVNYMMAKESVKKRLNGEARDGLSFTEFTYQLLQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ L +   C+LQMGGSDQWGNI  G +L  R    + +ALT PL+T A G K GKT SG
Sbjct: 180 FLHLYETKGCKLQMGGSDQWGNITTGTELIRRTNGGEAYALTCPLITKADGGKFGKTESG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKI 301
            IWL+   TSPY F+Q+W N+ D+D   + K  T+L  +EID       +   +   +K 
Sbjct: 240 NIWLDPRYTSPYKFYQFWLNVSDSDAERYIKIFTSLDKAEIDGLVAEHNEAPHLRALQKR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDEVS 347
           +A E+T MVH  E+   A  A+   F  +                 + +P   IS+D ++
Sbjct: 300 LAKEVTVMVHSEEDYNAAVDASNILFGNATSDALRKLDEDTLLAVFEGVPQFEISRDALT 359

Query: 348 RGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+  + L V  A    S  E R+ ++   + +N   ++     I   D      + +  
Sbjct: 360 EGVKAVDLFVDNAAVFASKGEMRKLVQGGGVSLNKEKLAAFDQVITTADLLDEKYLLVQR 419

Query: 407 GKKNHIIC 414
           GKKN+ + 
Sbjct: 420 GKKNYYLI 427


>gi|294101420|ref|YP_003553278.1| tyrosyl-tRNA synthetase [Aminobacterium colombiense DSM 12261]
 gi|293616400|gb|ADE56554.1| tyrosyl-tRNA synthetase [Aminobacterium colombiense DSM 12261]
          Length = 427

 Score =  490 bits (1263), Expect = e-136,   Method: Composition-based stats.
 Identities = 162/426 (38%), Positives = 245/426 (57%), Gaps = 19/426 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCS-QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +    L ERG +   S+P ELD     + ++TAYIG+D TA SLH GHL  +M L WLQ+
Sbjct: 3   NAFRALQERGLVEWCSHPEELDEFFEKEEMITAYIGFDPTADSLHVGHLIPIMTLSWLQR 62

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+PI L GGGT +IGDPS + + R ++  + ++ENI  ++     F+ +  GK  AL+
Sbjct: 63  MGHRPICLAGGGTGMIGDPSGKSKERNLLSPEAVRENIRGVRNQLEHFMNFNCGKNSALI 122

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDF 184
           +NN  WL  I ++D LRE+G FF++N M++ E V+SRL   E+S+S+ EF+Y +LQAYDF
Sbjct: 123 VNNYDWLKDISFLDFLREVGKFFTINYMVNKEHVKSRLNDPEKSISYTEFSYTLLQAYDF 182

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           + L + Y C++QMGG+DQ GNI+ GIDL  + K  + +  T+PLL T+SGTK GKT  GA
Sbjct: 183 MHLLEKYGCKIQMGGNDQQGNIVSGIDLIRKRKGDQAYGWTNPLLLTSSGTKFGKTEGGA 242

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKKII 302
           +WL+ + TSPY F+Q+W N +D  V    K  T LP+ EI+ +        E  EA+K +
Sbjct: 243 VWLDPKRTSPYRFYQFWINTEDEMVEKLLKFFTFLPLEEIEEIMSKHLAAPEKREAQKRL 302

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSI------------HSQHMPTISISKDEVSRGM 350
           A E+T++VH    A+  A A+   F   I             ++ +P  +IS    +   
Sbjct: 303 AWEVTSLVHSPHAADTVARASEILFGGEITHEDMSEEMMEMLAEEVPYGTIS---TALPR 359

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            L+ ++V      S  EARR ++   + +N   I +E   I+        ++ +  GKK 
Sbjct: 360 SLVDVLVSVEACKSKGEARRLIRGGGVYVNGDRIEDENGTIEKTLLIGGRHLFVRLGKKR 419

Query: 411 HIICHL 416
             +  +
Sbjct: 420 FNLIEI 425


>gi|222152308|ref|YP_002561483.1| tyrosyl-tRNA synthetase [Streptococcus uberis 0140J]
 gi|254783646|sp|B9DSZ3|SYY_STRU0 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|222113119|emb|CAR40521.1| putative tyrosyl-tRNA synthetase [Streptococcus uberis 0140J]
          Length = 418

 Score =  490 bits (1263), Expect = e-136,   Method: Composition-based stats.
 Identities = 142/417 (34%), Positives = 223/417 (53%), Gaps = 11/417 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L  RG + Q ++   L    ++G V+ Y GYD TA SLH GHL  ++    LQ  
Sbjct: 2   NIFEELKARGLVFQTTDEEALVKALTEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP +L+GG T +IGDPSF+D  R +   + + E   KIKG  S F+ +  G   A ++
Sbjct: 62  GHKPYALVGGATGLIGDPSFKDAERSLQTKETVLEWSGKIKGQLSQFLDFENGANKAELV 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I +ID LR++G +F+VN M+S +SV+ R+  E  +S+ EF Y I+Q YDF E
Sbjct: 122 NNYDWFSQISFIDFLRDVGKYFTVNYMMSKDSVKKRI--ETGISYTEFAYQIMQGYDFYE 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + ++  LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+W
Sbjct: 180 LNQKFNVTLQIGGSDQWGNMTAGTELLRRKADKTGHVMTVPLITDANGKKFGKSEGNAVW 239

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIAT 304
           L+ + TSPY  +Q+W N+ D D + F K  T L + EI  + K      +E  A+K +A 
Sbjct: 240 LDADKTSPYEMYQFWLNVMDEDAIRFLKIFTFLSLEEIAEIEKAFDAARHERLAQKTLAK 299

Query: 305 EITTMVHGREEAEKAATAAMECFDMSI-------HSQHMPTISISKDEVSRGMGLLTLIV 357
           E+ T+VHG E  ++A     + F  +I         Q +  +   + +    + ++ ++V
Sbjct: 300 EVVTLVHGEEAFKQALNITEQLFAGNIKNLSAAELKQGLSNVPNYQVQDEDNLNIVEILV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +  + S  +AR  +++ AI +N   I +    +   D        +  GKK + + 
Sbjct: 360 SSSISPSKRQAREDVQNGAIYLNGERIQDLDYTLTEDDKIDGQLTVIRRGKKKYAVL 416


>gi|327542973|gb|EGF29422.1| tyrosyl-tRNA synthetase [Rhodopirellula baltica WH47]
          Length = 432

 Score =  490 bits (1263), Expect = e-136,   Method: Composition-based stats.
 Identities = 157/422 (37%), Positives = 239/422 (56%), Gaps = 14/422 (3%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            +  L  RG ++Q ++   +  L + G  T YIG+D TA+SLH G + QLM+L   Q+ G
Sbjct: 10  LIEDLRWRGLLNQTTDENGIAELLNSGPQTIYIGFDPTATSLHVGGMMQLMMLRRFQRAG 69

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H PI+L+GG T +IGDPS + E R ++ + ++Q+N++ +      F+ +  G   A +LN
Sbjct: 70  HNPIALVGGATGMIGDPSGKSEERNLLSADQLQKNVDGVAAQMRHFLDF-EGDNAAKLLN 128

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W+    Y++ LR++G  F V  M+  ESVRSRL+ E  LS+ EF+YM+LQAYDFV L
Sbjct: 129 NFDWMKDYSYLEFLRDVGKNFPVGAMMGKESVRSRLESEAGLSYTEFSYMLLQAYDFVNL 188

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
           A+ +DCR+Q GGSDQWGNI  GIDLG R+   +LF +T+PLLTT+ G KMGKT SGA+WL
Sbjct: 189 AQTHDCRIQAGGSDQWGNITAGIDLGRRMLGKQLFGITAPLLTTSDGRKMGKTESGAVWL 248

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIATE 305
           + E TSPY F+QYW N+ D DV+     LT +  +E D +      +     A+K +A  
Sbjct: 249 DPERTSPYAFYQYWINVADEDVMRCLAYLTEIERAEYDELEDKTKNDPGQRTAQKRLAQW 308

Query: 306 ITTMVHGREEAEKAATAAMECFDM----------SIHSQHMPTISISKDEVS-RGMGLLT 354
           +T +VHG    + A  A    F                  +P+  + K  +   G+ ++ 
Sbjct: 309 LTELVHGEAGVQSAQRATQILFGGELGDTTDSQLREIFADVPSCDVPKSALEGEGLWIVE 368

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +  A    S  +ARR L    + +NN+ + + + ++   D D    + L  GK+ + + 
Sbjct: 369 ALQTAKLCNSGGDARRALSEGGVYVNNTRVEDVQKRLTADDLDGRSVLVLRRGKRKYALL 428

Query: 415 HL 416
            +
Sbjct: 429 KI 430


>gi|313891059|ref|ZP_07824678.1| tyrosine--tRNA ligase [Streptococcus pseudoporcinus SPIN 20026]
 gi|313120422|gb|EFR43542.1| tyrosine--tRNA ligase [Streptococcus pseudoporcinus SPIN 20026]
          Length = 420

 Score =  490 bits (1263), Expect = e-136,   Method: Composition-based stats.
 Identities = 143/417 (34%), Positives = 222/417 (53%), Gaps = 11/417 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L  RG + Q ++   L    ++G V+ Y GYD TA SLH GHL  ++    LQ  
Sbjct: 2   NIFEELKARGLVFQTTDEEALVKALTEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP +L+GG T +IGDPSF+D  R +   + + +   KIKG  S F+ +  G+  A ++
Sbjct: 62  GHKPYALVGGATGLIGDPSFKDAERSLQTKETVLDWSAKIKGQLSQFLDFENGENKAELV 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I +ID LR++G +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF E
Sbjct: 122 NNYDWFSQISFIDFLRDVGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFYE 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L   ++  LQ+GGSDQWGN+  G +L  R        +T PL+T ASG K GK+   A+W
Sbjct: 180 LNDKHNVTLQIGGSDQWGNMTAGTELLRRKSDKIAHVMTVPLITDASGKKFGKSEGNAVW 239

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIAT 304
           L+ + TSPY  +Q+W N+ D D V F K  T L + EI  + +     +    A+K +A 
Sbjct: 240 LDADKTSPYEMYQFWLNVMDDDAVRFLKIFTFLSLQEIAEIEEAFNLARHERLAQKTLAR 299

Query: 305 EITTMVHGREEAEKAATAAMECFDMSI-------HSQHMPTISISKDEVSRGMGLLTLIV 357
           E+ T+VHG E  ++A     + F  +I         Q +  +     +    + ++ ++V
Sbjct: 300 EVVTLVHGEEAYKQAVNITEQLFAGNIKQLSATELKQGLSNVPNYAVQTDDSLNIVDILV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +  +TS  +AR  +++ AI IN   + +    +   D        +  GKK + + 
Sbjct: 360 SSKISTSKRQAREDVQNGAIYINGERVQDLNYVLSDTDKIDGQLTAIRRGKKKYFVL 416


>gi|218133612|ref|ZP_03462416.1| hypothetical protein BACPEC_01481 [Bacteroides pectinophilus ATCC
           43243]
 gi|217990987|gb|EEC56993.1| hypothetical protein BACPEC_01481 [Bacteroides pectinophilus ATCC
           43243]
          Length = 407

 Score =  490 bits (1263), Expect = e-136,   Method: Composition-based stats.
 Identities = 174/410 (42%), Positives = 250/410 (60%), Gaps = 6/410 (1%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG I Q+++  E+  L + G  T YIG+D TA SLH GH   L L+  LQ  G
Sbjct: 3   IYDELVARGLIAQVTDEDEIKELINNGKATFYIGFDPTADSLHVGHFMALCLMKRLQMAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           +KPI+L+GGGT++IGDPS R + R+MM  + I  N+E  K   + FI +  GK  AL++N
Sbjct: 63  NKPIALIGGGTAMIGDPSGRTDMRQMMTVETINHNVECFKKQMARFIDFSDGK--ALLVN 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL ++ Y+D+LRE+G  FSVNRML+ E  + R++R   LSFLEFNYMI+Q+YDF  L
Sbjct: 121 NADWLMNLNYVDVLREVGPHFSVNRMLTAECYKQRMER--GLSFLEFNYMIMQSYDFYML 178

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            + Y C ++ GG DQW N++ G +L  R      +A+T  LL  + G KMGKT SGA+WL
Sbjct: 179 YQKYGCNMEFGGDDQWSNMLGGTELIRRKLGKDTYAMTINLLLNSEGKKMGKTQSGAVWL 238

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           +   T+PY F+QYWRN+ DADV+   K LT LP+ EI++M   +G ++N+AK+I+A E+T
Sbjct: 239 DANKTTPYEFYQYWRNVADADVIKCLKMLTFLPLEEIEKMESWEGSQLNKAKEILAYELT 298

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTN 366
            +VHG EEA+KA  AA   F     + +MP+  +   +   G + ++TL+ K G   S +
Sbjct: 299 KLVHGEEEAQKADAAAKALFAGGGDTSNMPSTKLEDADFEDGAINIVTLVHKTGIVASRS 358

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           EARR ++   I ++   I++    I    F   G + L  GKK      +
Sbjct: 359 EARRAVEQGGITLDGEKIADINAVIAKDRFAGEG-LVLKKGKKTFHKITV 407


>gi|314936172|ref|ZP_07843519.1| tyrosine--tRNA ligase [Staphylococcus hominis subsp. hominis C80]
 gi|313654791|gb|EFS18536.1| tyrosine--tRNA ligase [Staphylococcus hominis subsp. hominis C80]
          Length = 420

 Score =  490 bits (1263), Expect = e-136,   Method: Composition-based stats.
 Identities = 146/421 (34%), Positives = 229/421 (54%), Gaps = 20/421 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L  RG I+Q ++ + ++ L ++  VT Y G D TA SLH GHL   M L   Q+ G
Sbjct: 5   LLEELQWRGLIYQQTDEQGIEDLLNKEQVTLYCGADPTADSLHIGHLLPFMTLRRFQEHG 64

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+PI L+GGGT +IGDPS + E R +    ++ +N+E +        ++GT K  A+++N
Sbjct: 65  HRPIVLIGGGTGMIGDPSGKSEERVLQTEDQVAKNVEGLSAQMHKLFEFGTDKG-AVLVN 123

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  I  I  LR+ G    VN ML  +S++SRL  E  +S+ EF Y ILQA DF  L
Sbjct: 124 NRDWLSQISLISFLRDYGKHVGVNYMLGKDSIQSRL--ENGISYTEFTYTILQAIDFGHL 181

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLG-ERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
            +  +C++Q+GGSDQWGNI  GI+L        + + LT PL+T + G K GK+ SGA+W
Sbjct: 182 NRELNCKIQVGGSDQWGNITSGIELMRRMYGQTEAYGLTIPLVTKSDGKKFGKSESGAVW 241

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIAT 304
           L+ E T+PY F+Q+W N  D DV+ F K  T L   +I+R+ +   +   + EA+K +A 
Sbjct: 242 LDAEKTTPYEFYQFWINQSDEDVIKFLKYFTFLSKEDINRLEQSRDEAPHLREAQKALAE 301

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLT 354
            +T  +HG+E  + A   +   F   + S          + +P + +SK        ++ 
Sbjct: 302 NVTEFIHGKEALDDAIRISEALFKGDLKSLSIKDIKAGFKEVPQVEVSKAT----TNIID 357

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +++++G A+S  +AR  + + AI IN     +    +  +D        +  GKK + + 
Sbjct: 358 VLIESGIASSKRQAREDVNNGAIYINGEREQSVDYNLTDEDKFDNEFTIIRRGKKKYFMV 417

Query: 415 H 415
           +
Sbjct: 418 N 418


>gi|303233835|ref|ZP_07320488.1| tyrosine--tRNA ligase [Finegoldia magna BVS033A4]
 gi|302495030|gb|EFL54783.1| tyrosine--tRNA ligase [Finegoldia magna BVS033A4]
          Length = 415

 Score =  490 bits (1263), Expect = e-136,   Method: Composition-based stats.
 Identities = 172/411 (41%), Positives = 256/411 (62%), Gaps = 5/411 (1%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L  RG+  Q +   EL  L  +  V  YIG+D TA SL  GH  QLM++  +Q  
Sbjct: 10  NVFDELVARGYFEQATYEDELRDLLGKERVPFYIGFDATADSLTIGHFIQLMVMMRMQAH 69

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH PI L+GGGT++IGDPS R++ R +M  + I EN  +     + FI +G  K  A + 
Sbjct: 70  GHIPICLLGGGTTMIGDPSGRNDMRSIMTKEVIDENARRFYSQMTRFIDFGEDK--AYIE 127

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN+ WL ++ ++D +REIG  FSVN+ML+ ES ++R+K  Q L+F EF+YM++Q+YD++ 
Sbjct: 128 NNKDWLLNLNFLDFMREIGVHFSVNQMLTLESYKNRMK--QGLTFFEFSYMLMQSYDYLV 185

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + Y C+LQMGGSDQW NI+ G DL  +L+  K++A+T  LLTTA G KMGK+  GA+W
Sbjct: 186 LYRKYGCKLQMGGSDQWSNILGGYDLVRKLENDKVYAMTFKLLTTADGVKMGKSQKGAVW 245

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           L++  T+PY+ +QY RN+DD DV  F   LT LP  E  R+  L+G EIN+AK+++A E+
Sbjct: 246 LDENKTTPYDLFQYMRNVDDRDVEKFLLMLTFLPTDECKRLGSLEGSEINKAKEVLAFEV 305

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
             +VHG E+AE+A   A   F+ ++  ++MPT  +   +   G+GLL L+   G   S +
Sbjct: 306 CKLVHGEEKAEEARQTANALFNSNVVDENMPTTEMKALDFENGIGLLNLLTMTGLTQSNS 365

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           EARR +  N I +N++  ++ K  I + DF+    + +  GKK +    L 
Sbjct: 366 EARRLVTQNGISVNDNKEADPKRVITIHDFNDD-ELIIKKGKKVYHRVKLV 415


>gi|290961478|ref|YP_003492660.1| tyrosyl-tRNA synthetase [Streptomyces scabiei 87.22]
 gi|260651004|emb|CBG74122.1| tyrosyl-tRNA synthetase (EC 6.1.1.1) [Streptomyces scabiei 87.22]
          Length = 422

 Score =  490 bits (1262), Expect = e-136,   Method: Composition-based stats.
 Identities = 143/422 (33%), Positives = 229/422 (54%), Gaps = 11/422 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +D +  L  RG     ++   L    + G VT Y G+D TA SLH GHL Q++ +  LQ+
Sbjct: 2   TDIVDELKWRGLFSLSTDEDALRKALADGPVTFYCGFDPTAPSLHVGHLVQVLTVRRLQQ 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+P++L+GG T +IGDP      R +   + +   + +++     F+ +  G+  A+M
Sbjct: 62  AGHRPLALVGGATGLIGDPRP-TAERTLNDPETVAGWVGRLRAQIEPFLSF-EGENAAVM 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  W   +  I+ LR+IG  F VN+ML+ +SV  RL+ EQ +S+ EF+Y ILQ  DF+
Sbjct: 120 VNNLDWTEGLSAIEFLRDIGKHFRVNKMLAKDSVARRLESEQGISYTEFSYQILQGMDFL 179

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASGTKMGKTLSGA 244
           +L + Y C LQ GGSDQWGN+  G+DL  R++   +  AL +PL+T A GTK GKT  GA
Sbjct: 180 QLYRRYGCTLQQGGSDQWGNLTAGLDLIHRMEPGVEAHALATPLMTKADGTKFGKTEGGA 239

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKII 302
           +WL+ EMTSPY F+Q+W N+DD D+  + + L+    +E++ + +   +  +   A++ +
Sbjct: 240 VWLDPEMTSPYAFYQFWLNVDDRDISGYMRILSFRSRAELEELERQTEERPQARAAQRAL 299

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQ------HMPTISISKDEVSRGMGLLTLI 356
           A E+TT+VHG E+      A+   F     ++            +   +V     ++ L+
Sbjct: 300 AEELTTLVHGAEQTAAVIAASRALFGQGELAELDERTLAAALSELPHVKVPEPAPVVDLL 359

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            +AG   S +  RR +K     +NN  ++ E      +D      + L  GKKN     +
Sbjct: 360 AEAGLVPSKSAGRRTVKEGGAYVNNVKVTAEDAVPAAEDLIHGRWLVLRRGKKNLAAVEV 419

Query: 417 CG 418
            G
Sbjct: 420 TG 421


>gi|315282536|ref|ZP_07870926.1| tyrosyl-tRNA synthetase [Listeria marthii FSL S4-120]
 gi|313613817|gb|EFR87571.1| tyrosyl-tRNA synthetase [Listeria marthii FSL S4-120]
          Length = 429

 Score =  490 bits (1262), Expect = e-136,   Method: Composition-based stats.
 Identities = 155/425 (36%), Positives = 219/425 (51%), Gaps = 21/425 (4%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
            + + +  L  RG I+Q ++   L     +  ++ Y G D +  S+H GHL   M+L   
Sbjct: 9   IEMNIIDELEWRGAIYQQTDEEGLRKWVEEKQISLYCGIDPSGDSMHIGHLIPFMILRRF 68

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q  GH+PI L+GG T  IGDPS + E R++   ++I +N+E ++        +  G + A
Sbjct: 69  QNAGHRPIILVGGATGTIGDPSGKKEERQLQSMEQISKNVESLRVQLGKIFDF-EGDSAA 127

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            M+NN  W   +  +D LR+ G  F+VN MLS + V SRL  E  +SF EF Y ILQA D
Sbjct: 128 SMVNNYDWTKDVSILDFLRDYGKEFNVNTMLSKDIVASRL--EVGISFTEFAYQILQAMD 185

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTL 241
           F  L +  DCRLQ+GGSDQWGNI  G+DL  + +    K F LT PLLT A GTK GK+ 
Sbjct: 186 FNHLYEFNDCRLQIGGSDQWGNITAGLDLIRKKQGENAKAFGLTIPLLTKADGTKFGKSE 245

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAK 299
            GAIWLN E T+PY F+Q+W N DD DVV + K  T L  +EI  +AK       +  A+
Sbjct: 246 GGAIWLNPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLTEAEIAELAKQVETEPHLRAAQ 305

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRG 349
           K +A E+T  VH  E  E+A   +   F   + +          + +PT      EV   
Sbjct: 306 KTLAAEMTKFVHSEEALEQALKISKALFSGDVKALTADEIEQGFKDVPTFVAEDAEV--- 362

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
             L+  +V  G   S  +AR  + + AI IN     N +  +   D        +  GKK
Sbjct: 363 -NLVDWLVTLGIEPSKRQAREDVGNGAIYINGERQQNLEKIMDASDRIENKFTIVRRGKK 421

Query: 410 NHIIC 414
            + + 
Sbjct: 422 KYFLV 426


>gi|195977257|ref|YP_002122501.1| tyrosyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus
           MGCS10565]
 gi|254783639|sp|B4U045|SYY_STREM RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|195973962|gb|ACG61488.1| tyrosyl-tRNA synthetase TyrS [Streptococcus equi subsp.
           zooepidemicus MGCS10565]
          Length = 418

 Score =  490 bits (1262), Expect = e-136,   Method: Composition-based stats.
 Identities = 140/417 (33%), Positives = 222/417 (53%), Gaps = 11/417 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L  RG + Q ++   L    ++G V+ Y GYD TA SLH GHL  ++    LQ  
Sbjct: 2   NIFEELKARGLVFQTTDEEALVKALTEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP +L+GG T +IGDPSF+D  R +   + + +  +KIK   S F+ +  G+  A ++
Sbjct: 62  GHKPYALVGGATGLIGDPSFKDAERILQTKETVLDWSQKIKEQLSCFLDFDNGENKAELV 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I +ID LR++G  F+VN M+S +SV+ R+  E  +S+ EF Y ++Q YDF E
Sbjct: 122 NNYDWFSQISFIDFLRDVGKHFTVNYMMSKDSVKKRI--ETGISYTEFAYQVMQGYDFYE 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L   ++  LQ+GGSDQWGN+  G +L  +        +T PL+T A+G K GK+   AIW
Sbjct: 180 LNAKHNVTLQIGGSDQWGNMTAGTELLRKKADKTGHVMTVPLITDATGKKFGKSEGNAIW 239

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIAT 304
           L+ + TSPY  +Q+W N+ D D V F K  T L + EI  + +      +E  A+K +A 
Sbjct: 240 LDAKKTSPYEMYQFWLNVMDDDAVRFLKIFTFLSLDEIAAIEEQFNAARHERLAQKTLAR 299

Query: 305 EITTMVHGREEAEKAATAAMECFDMSI-------HSQHMPTISISKDEVSRGMGLLTLIV 357
           E+ T+VHG    ++A     + F  +I         Q +  +   + +    + ++ ++V
Sbjct: 300 EVVTLVHGEAAYQQALNITEQLFAGAIKNLSAAELKQGLSNVPNYQVQAEDSLNIVDMLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            AG + S  +AR  L++ AI +N   + +    +   D        +  GKK + + 
Sbjct: 360 TAGISPSKRQAREDLQNGAIYLNGERLQDLDYSLSTADRIDNQLTVIRRGKKKYAVL 416


>gi|325129576|gb|EGC52400.1| tyrosyl-tRNA synthetase [Neisseria meningitidis OX99.30304]
          Length = 431

 Score =  490 bits (1262), Expect = e-136,   Method: Composition-based stats.
 Identities = 157/427 (36%), Positives = 228/427 (53%), Gaps = 21/427 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            +  L  RG I Q ++   LD L ++  ++ Y G+D TA SLH GHL  ++ L   Q+ G
Sbjct: 3   VIQDLQSRGLIAQTTDIEALDALLNEQKISLYCGFDPTADSLHIGHLLPVLALRRFQQAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H PI+L+GG T +IGDPSF+   R +  ++ +   +E I+   + F+ +  G   A+M N
Sbjct: 63  HTPIALVGGATGMIGDPSFKAAERSLNSAETVAGWVESIRSQLTPFLSF-EGGNAAIMAN 121

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDFVE 186
           N  W   +  +D LR+IG  FSVN ML+ ESV+ R+ R    +SF EF Y +LQ YDF E
Sbjct: 122 NADWFGKMNCLDFLRDIGKHFSVNAMLNKESVKQRIDRDGAGISFTEFAYSLLQGYDFAE 181

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L K +   L++GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  GA+W
Sbjct: 182 LNKRHGAVLEIGGSDQWGNITAGIDLTRRLNQKQVFGLTLPLVTKSDGTKFGKTEGGAVW 241

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINEAKKIIAT 304
           LN + TSPY F+Q+W  + DADV  F K  T L + EID +           EA++I+A 
Sbjct: 242 LNAKKTSPYQFYQFWLKVADADVYKFLKYFTFLSIEEIDAVEAKDQASGSKPEAQRILAE 301

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTLIVK 358
           E+T ++HG E    A   +   F     S      + +    +   EVS G+ ++  +VK
Sbjct: 302 EMTRLIHGEEALAAAQRISESLFAEDQSSLTESDFEQLALDGLPAFEVSDGINVVEALVK 361

Query: 359 AGFATSTNEARRHLKSNAIKINNSIIS-----------NEKLQIKLQDFDSTGNIKLSFG 407
            G A+S  EAR  + S A+ +N                ++   +  +         L  G
Sbjct: 362 TGLASSNKEARGFVNSKAVLLNGKPAEANNPNHAAERPDDACLLTDEHKRFGKYTILRRG 421

Query: 408 KKNHIIC 414
           K+NH + 
Sbjct: 422 KRNHALL 428


>gi|260587833|ref|ZP_05853746.1| tyrosine--tRNA ligase [Blautia hansenii DSM 20583]
 gi|260542098|gb|EEX22667.1| tyrosine--tRNA ligase [Blautia hansenii DSM 20583]
          Length = 406

 Score =  490 bits (1262), Expect = e-136,   Method: Composition-based stats.
 Identities = 178/410 (43%), Positives = 253/410 (61%), Gaps = 7/410 (1%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG I Q+++  E+  L + G  T YIG+D TA SLH GH   L L+  LQ  G
Sbjct: 3   IYDELVARGLIAQVTDEEEIRELINNGKATFYIGFDPTADSLHVGHFMALCLMKRLQMAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           +KPI+L+GGGT  IGDPS R + R MM  + IQ N +  K     FI +  GK  A+M+N
Sbjct: 63  NKPIALIGGGTGYIGDPSGRSDMRSMMTPEIIQHNCDCFKKQMERFIDFSEGK--AMMVN 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  + Y++LLRE+G  FSVNRML+ E  + R+  E+ LSFLEFNYMI+Q+YDF  L
Sbjct: 121 NADWLLDLNYVELLREVGPHFSVNRMLTAECYKQRM--EKGLSFLEFNYMIMQSYDFYML 178

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            + Y C +Q GG DQW N++ G +L  R       A+T  LL  + G KMGKT SGA+WL
Sbjct: 179 YQKYGCNMQFGGDDQWSNMLGGTELIRRKLGENACAMTITLLLNSEGKKMGKTQSGAVWL 238

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           +   TSP++F+QYWRN+ DADV+   + LT LP+ +ID M K +G ++N+AK+I+A E+T
Sbjct: 239 DPNKTSPFDFYQYWRNVADADVLKCIRMLTFLPLEQIDEMDKWEGSQLNKAKEILAYELT 298

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTN 366
            +VHG+EEAEKA  AA   F    ++ +MP+  I + ++  G + L++L+ K+G A + +
Sbjct: 299 ALVHGKEEAEKAQEAARALFSSG-NAANMPSAKIEEADLVDGNIDLISLLHKSGLANTRS 357

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           EARR ++   + I+   +++ K  +  +     G I L  GKKN     L
Sbjct: 358 EARRAIEQGGVSIDGEKVTDIKHLVSGEKLQGDG-IVLKKGKKNFRKVTL 406


>gi|229112512|ref|ZP_04242049.1| Tyrosyl-tRNA synthetase [Bacillus cereus Rock1-15]
 gi|228670892|gb|EEL26199.1| Tyrosyl-tRNA synthetase [Bacillus cereus Rock1-15]
          Length = 420

 Score =  490 bits (1262), Expect = e-136,   Method: Composition-based stats.
 Identities = 148/424 (34%), Positives = 221/424 (52%), Gaps = 21/424 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG ++Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  
Sbjct: 2   NIIDELEWRGAVNQQTDEEGLRKLVEEKKISLYCGVDPTGDSMHIGHLIPFMMIKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P+ L+GG T  IGDPS R   R++   + +Q N++ +         +G G ++  M+
Sbjct: 62  GHHPVILIGGATGTIGDPSGRQSERQLQTLEVVQHNVDALTAQMKKLFDFG-GNSEVKMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I  I+ LR+ G  FS+N ML+ + V SRL  +  +SF EF Y ILQA DF  
Sbjct: 121 NNYDWTHEINIIEFLRDYGKNFSINSMLAKDIVASRL--DTGISFTEFTYQILQAMDFHH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKLFALTSPLLTTASGTKMGKTLSGA 244
           L    D +LQ+GGSDQWGNI  G+DL  +L+    K+F LT PLL  + GTK GK+  GA
Sbjct: 179 LYTKEDVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSAGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKII 302
           +WL+ E T+P+ F+Q+W N DD DV+ + K  T L    ID +A     E    EA+K++
Sbjct: 239 VWLDPEKTTPFEFYQFWVNTDDRDVIKYLKYFTFLTKERIDELATKVEAEPHKREAQKVL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGL 352
           A E+T  VHG E   +A       F   I S          + MPT   SK+       +
Sbjct: 299 AEEMTKFVHGEEAFLQAEKITAALFSGDIKSLTADEIEQGFKEMPTFQSSKET----KNI 354

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           +  +V  G   S  +AR  + + AI +N   +++    + +++      I +  GKKN+ 
Sbjct: 355 VEWLVDLGIEPSRRQAREDINNGAISMNGEKVTDVGTDVTVENSFDGRFIIIRKGKKNYS 414

Query: 413 ICHL 416
           +  L
Sbjct: 415 LVKL 418


>gi|323126353|gb|ADX23650.1| tyrosyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           equisimilis ATCC 12394]
          Length = 418

 Score =  490 bits (1262), Expect = e-136,   Method: Composition-based stats.
 Identities = 144/417 (34%), Positives = 223/417 (53%), Gaps = 11/417 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L  RG + Q ++   L    ++G V+ Y GYD TA SLH GHL  ++    LQ  
Sbjct: 2   NIFEELKARGLVFQTTDEEALVKALTEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP +L+GG T +IGDPSF+D  R +   + + E  +KIKG  S+F+ +  G   A ++
Sbjct: 62  GHKPYALVGGATGLIGDPSFKDAERSLQTKETVLEWSDKIKGQLSTFLDFENGDNKAELV 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I +ID LR++G +F+VN M+S +SV+ R+  E  +S+ EF Y I+Q YDF E
Sbjct: 122 NNYDWFSQISFIDFLRDVGKYFTVNYMMSKDSVKKRI--ETGISYTEFAYQIMQGYDFYE 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L   ++  LQ+GGSDQWGN+  G +L  R        +T PL+T ++G K GK+   A+W
Sbjct: 180 LNNKHNVTLQIGGSDQWGNMTAGTELLRRKADQTGHVMTVPLITDSTGKKFGKSEGNAVW 239

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIAT 304
           L+ + TSPY  +Q+W N+ D D V F K  T L + EI  +        +E  A+K +A 
Sbjct: 240 LDADKTSPYEMYQFWLNVMDDDAVRFLKIFTFLSLDEIADIESQFNAARHERLAQKTLAR 299

Query: 305 EITTMVHGREEAEKAATAAMECFDMSI-------HSQHMPTISISKDEVSRGMGLLTLIV 357
           E+ T+VHG E  ++A     + F  +I         Q +  +     + +  + L+ ++V
Sbjct: 300 EVVTLVHGEEAYKQALNITEQLFAGNIKNLSANELKQGLSNVPNYHVQSADSLNLVDMLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            AG + S  +AR  +++ AI IN   +      +   D        +  GKK + + 
Sbjct: 360 TAGISPSKRQAREDVQNGAIYINGERVQELDYTLSDTDKIDNQLTVVRRGKKKYAVL 416


>gi|227548150|ref|ZP_03978199.1| tyrosyl-tRNA synthetase [Corynebacterium lipophiloflavum DSM 44291]
 gi|227079812|gb|EEI17775.1| tyrosyl-tRNA synthetase [Corynebacterium lipophiloflavum DSM 44291]
          Length = 423

 Score =  490 bits (1262), Expect = e-136,   Method: Composition-based stats.
 Identities = 151/421 (35%), Positives = 229/421 (54%), Gaps = 15/421 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +D ++ L  RG I+Q ++  +L    ++  +T Y G+D T  SLHAGHL  L++L   Q 
Sbjct: 5   TDIIAELQWRGLINQSTDLEKLREE-TRQPITLYCGFDPTGPSLHAGHLVPLLMLRRFQM 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+PI L GG T  IGDP    E R M     + +  ++I G  + F+ +  G   AL+
Sbjct: 64  AGHRPIVLAGGATGKIGDPRDVGE-RSMNSDDTVADWAQRISGQLARFMDF-DGDNAALL 121

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  W   +  I  LR++G  FS++ MLS ++V+ RL+ +  +S+ EF+YM+LQA DFV
Sbjct: 122 VNNNDWTADMSVITFLRDVGKHFSLSTMLSRDTVKRRLEND-GISYTEFSYMLLQANDFV 180

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT-LSGA 244
           +L +N+DC LQ+GG DQWGN++ G+DL  R+   ++ ALT PL+T + G K GK+   G+
Sbjct: 181 QLRRNHDCVLQIGGGDQWGNLVGGVDLNRRMDGAQVHALTVPLVTDSEGKKFGKSTGGGS 240

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKII 302
           +WL+ EMTSPY ++QY+ N  DADV+ + +  T L   E+ R+     +     EA+  +
Sbjct: 241 LWLDPEMTSPYTWYQYFVNTADADVIRYLRWFTFLDSEELSRLETEVAESPFKREAQIRL 300

Query: 303 ATEITTMVHGREEAEKAATAAMECF--------DMSIHSQHMPTISISKDEVSRGMGLLT 354
           A E+T +VHG E    A  AA   F        D    +  +    + +     G  ++ 
Sbjct: 301 AQEMTDLVHGPEATRGAELAAQALFGRADLRELDERTLASAVSETRVHETAADAGETIVD 360

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           L+V AG A S   ARR +K   +  NN  + +E       DF     + L  GKKN    
Sbjct: 361 LLVGAGLADSKGAARRSIKEGGVYANNERVESEDFVPAADDFLHGRWLVLRRGKKNFAGV 420

Query: 415 H 415
            
Sbjct: 421 K 421


>gi|253681500|ref|ZP_04862297.1| tyrosine--tRNA ligase [Clostridium botulinum D str. 1873]
 gi|253561212|gb|EES90664.1| tyrosine--tRNA ligase [Clostridium botulinum D str. 1873]
          Length = 406

 Score =  490 bits (1262), Expect = e-136,   Method: Composition-based stats.
 Identities = 172/410 (41%), Positives = 258/410 (62%), Gaps = 7/410 (1%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L ERG+I Q ++  E+  L  +  +T YIG+D TA SLH GH   +M +  +QK 
Sbjct: 3   NVFDTLMERGYIKQTTHEEEIRELLGKEKITFYIGFDPTADSLHVGHFIAMMFMSHMQKA 62

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI+L+GGGT++IGDPS + + R+M+  ++I  ++  IK     FI +   K  A+++
Sbjct: 63  GHRPIALVGGGTAMIGDPSGKTDMRKMLTKEQIDIHVAGIKKQLGRFIDFSDDK--AILV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL   KY++ +REIG  FSVN+ML+ E  + RL  E+ LSFLEFNYM++QAYDF+E
Sbjct: 121 NNADWLLGAKYVEFIREIGIHFSVNKMLTAECFKQRL--EKGLSFLEFNYMLMQAYDFLE 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + Y C +++GG DQW N+I G+DL  R +    FA+T  LLT + G KMGKT+ GA+W
Sbjct: 179 LNRKYGCVMELGGDDQWSNMIAGMDLIRRKERKPAFAMTCSLLTNSEGQKMGKTVGGALW 238

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           L+ E TSPY+F+QYWRN+ DADV      LT +PM E+ R++ L+G  INEAKK++A E+
Sbjct: 239 LDAEKTSPYDFYQYWRNVADADVEKCLSLLTFVPMDEVKRLSALEGAAINEAKKVLAFEV 298

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
           T +VHG EEA+KA  AA   F       ++PT+ ISK+++  G  LL +++      S  
Sbjct: 299 TKLVHGEEEAQKAQAAAEALFSGGADMSNVPTVEISKEDI--GTALLEILLNGKVIPSKK 356

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           E RR ++   + +N+  +++    ++  D    G+  +  GKK +    +
Sbjct: 357 EGRRLIEQGGLYMNDENVTDPNATLEESDL-KDGSALIKKGKKKYYRIVV 405


>gi|229007390|ref|ZP_04164987.1| Tyrosyl-tRNA synthetase [Bacillus mycoides Rock1-4]
 gi|228753778|gb|EEM03219.1| Tyrosyl-tRNA synthetase [Bacillus mycoides Rock1-4]
          Length = 420

 Score =  490 bits (1262), Expect = e-136,   Method: Composition-based stats.
 Identities = 146/424 (34%), Positives = 218/424 (51%), Gaps = 21/424 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  R  I+Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  
Sbjct: 2   NIIDELEWRDAINQQTDADGLRELVEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P+ L+GG T  IGDPS R   R++   +++Q N++ +         +G G ++  M+
Sbjct: 62  GHHPVILIGGATGTIGDPSGRQTERQLQTLEQVQHNVDALTAQMQKLFDFG-GNSEVKMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I  I+ LR+ G  FS+N ML+ + V SRL  +  +SF EF Y ILQA DF  
Sbjct: 121 NNYDWTHQINIIEFLRDYGKNFSINSMLAKDIVASRL--DTGISFTEFTYQILQAMDFHH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKLFALTSPLLTTASGTKMGKTLSGA 244
           L K    +LQ+GGSDQWGNI  G+DL  +L+    K+F LT PLL  + GTK GK+  GA
Sbjct: 179 LYKEEGVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSAGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKII 302
           +WL+ E T+P+ F+Q+W N DD DVV + K  T L    ID   +         EA+K++
Sbjct: 239 VWLDPEKTTPFEFYQFWLNTDDRDVVKYLKYFTFLTKDRIDELVVKVQTEPHKREAQKVL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGL 352
           A E+T  VHG     +A       F   I S          + MPT   SK+       +
Sbjct: 299 AEEMTKFVHGEHALSQALKITEALFSGDIKSLTADEIEQGFKDMPTFHASKET----KNI 354

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           +  +V  G   S  +AR  + + AI +N   +++    + +++      I +  GKKN+ 
Sbjct: 355 VEWLVDLGIEPSRRQAREDINNGAISMNGEKVTDVNTHVTVENSFDERFIIIRKGKKNYS 414

Query: 413 ICHL 416
           +  L
Sbjct: 415 LVKL 418


>gi|32475732|ref|NP_868726.1| tyrosyl-tRNA synthetase [Rhodopirellula baltica SH 1]
 gi|81659983|sp|Q7UM14|SYY_RHOBA RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|32446275|emb|CAD76103.1| tyrosyl-tRNA synthetase [Rhodopirellula baltica SH 1]
          Length = 438

 Score =  490 bits (1262), Expect = e-136,   Method: Composition-based stats.
 Identities = 157/424 (37%), Positives = 241/424 (56%), Gaps = 14/424 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +  +  L  RG ++Q ++   +  L + G  T YIG+D TA+SLH G + QLM+L   Q+
Sbjct: 14  NSLIEDLRWRGLLNQTTDENGIAELLNSGPQTIYIGFDPTATSLHVGGMMQLMMLRRFQR 73

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH PI+L+GG T +IGDPS + E R ++ + ++Q+N++ +      F+ +  G   A +
Sbjct: 74  AGHNPIALVGGATGMIGDPSGKSEERNLLSADQLQKNVDGVAAQMRHFLDF-EGDNAAKL 132

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           LNN  W+    Y++ LR++G  F V  M+  ESVRSRL+ E  LS+ EF+YM+LQAYDFV
Sbjct: 133 LNNFDWMKDYSYLEFLRDVGKNFPVGAMMGKESVRSRLESEAGLSYTEFSYMLLQAYDFV 192

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            LA+ +DCR+Q GGSDQWGNI  GIDLG R+   +LF +T+PLLTT+ G KMGKT SGA+
Sbjct: 193 NLAQTHDCRIQAGGSDQWGNITAGIDLGRRMLGKQLFGITAPLLTTSDGRKMGKTESGAV 252

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIA 303
           WL+ E TSPY F+QYW N+ D DV+     LT +  +E D +      +     A+K +A
Sbjct: 253 WLDPERTSPYAFYQYWINVADEDVMRCLAYLTEIERAEYDELEDKTKNDPGQRTAQKRLA 312

Query: 304 TEITTMVHGREEAEKAATAAMECFDM----------SIHSQHMPTISISKDEVS-RGMGL 352
             +T +VHG    + A  A    F                  +P+  + K  +   G+ +
Sbjct: 313 QWLTELVHGEAGVQSAQRATQILFGGELGDTTDSQLREIFADVPSCDVPKSALEGEGLWI 372

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           +  +  A    S  +ARR L    + +NN+ + + + ++ + D D    + L  GK+ + 
Sbjct: 373 VEALQTAKLCNSGGDARRALSEGGVYVNNTRVEDVQKRLTVDDLDGRSVLVLRRGKRKYA 432

Query: 413 ICHL 416
           +  +
Sbjct: 433 LLKI 436


>gi|213963510|ref|ZP_03391763.1| tyrosyl-tRNA synthetase [Capnocytophaga sputigena Capno]
 gi|213953790|gb|EEB65119.1| tyrosyl-tRNA synthetase [Capnocytophaga sputigena Capno]
          Length = 431

 Score =  490 bits (1262), Expect = e-136,   Method: Composition-based stats.
 Identities = 160/431 (37%), Positives = 231/431 (53%), Gaps = 24/431 (5%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
            +F+  L  RG I  I    E      +G+  AY+G D TA SLH GHL  +M+L   Q 
Sbjct: 2   KNFIEELRWRGMIQDIMPETE--QHLMEGLRAAYVGIDPTADSLHIGHLVGVMMLRHFQN 59

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG-TGKTDAL 124
            GHKP +L+GG T +IGDPS +   R ++  + +  NI  IK   + F+ +  T    A 
Sbjct: 60  CGHKPYALVGGATGMIGDPSGKSVERNLLTEEVLAHNIAGIKKQLAKFLDFESTAPNRAE 119

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL---KREQSLSFLEFNYMILQA 181
           ++NN  W+    ++  +R+IG   +VN M++ +SV+ R    +    +SF EF+Y +LQ 
Sbjct: 120 LVNNYDWMKEFSFLSFIRDIGKHITVNYMMAKDSVKKRFDPNENTDGMSFTEFSYQLLQG 179

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
           YDF+ L +  +  LQMGGSDQWGNI  G +L  R+   K +ALT PL+T A GTK GK+ 
Sbjct: 180 YDFLHLYQEKNLTLQMGGSDQWGNITTGTELIRRIAGGKAYALTCPLITKADGTKFGKSE 239

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAK 299
            G +WL+ E TSPY F+QYW NI DAD   + K  T L   EID +         +   +
Sbjct: 240 GGNVWLDPEKTSPYKFYQYWINISDADAERYIKIFTMLSKEEIDALIAQHAEAPHLRLLQ 299

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDE 345
             +A E+T +VHGREE EKA  A+   F  S  +                +P   +S  +
Sbjct: 300 NKLAEELTVLVHGREELEKAKKASQILFGNSTSADLRTLDEKTFLEVFDGVPQAEVSAAD 359

Query: 346 VSRGMGLLTLI-VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           ++ G+ ++ ++  K GF +S +EARR LK N+I +N   +  E  QI  +D      I L
Sbjct: 360 IAGGLDMIAILSAKTGFISSNSEARRALKENSISVNKEKV-GEDYQIAEKDLVDGKFILL 418

Query: 405 SFGKKNHIICH 415
             GKKN+ I  
Sbjct: 419 QRGKKNYFIVK 429


>gi|89893035|ref|YP_516522.1| hypothetical protein DSY0289 [Desulfitobacterium hafniense Y51]
 gi|123280260|sp|Q251G4|SYY_DESHY RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|89332483|dbj|BAE82078.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 420

 Score =  490 bits (1262), Expect = e-136,   Method: Composition-based stats.
 Identities = 155/422 (36%), Positives = 234/422 (55%), Gaps = 14/422 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + L  L  RG ++Q ++   L     +  +T Y G+D TA SLH GHL  +++L   Q  
Sbjct: 2   NILDDLKARGLVYQTTDEEALYKRL-ESPMTLYCGFDPTADSLHIGHLLPVLMLRRFQLA 60

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH PI+L+GGGT +IGDPS +   R +  ++ +QE   +IK   S F+ +      A+M 
Sbjct: 61  GHCPIALVGGGTGLIGDPSGKTSERTLNPTEVVQEWANRIKEQLSCFLDFEGVGNPAIMA 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL +I  I+ LR+IG  FS+  ML+ ESV SR+ R   +SF EF+Y ILQ+YDF++
Sbjct: 121 NNYEWLGTINVIEFLRDIGKNFSLGSMLAKESVESRMSR--GISFTEFSYQILQSYDFLK 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERL---KTPKLFALTSPLLTTASGTKMGKTLSG 243
           L + Y C +Q+GGSDQWGNI  G DL  R+   +  ++  LT PL+T + GTK GKT  G
Sbjct: 179 LNELYGCEMQIGGSDQWGNITSGTDLIRRMSVGEDRQVHGLTVPLVTKSDGTKFGKTEGG 238

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKI 301
           A+WL+++ TSPY F+Q+W N DD DVV +    T L + EI           E   A+++
Sbjct: 239 AVWLDQDKTSPYKFYQFWINTDDRDVVKYLNFFTFLSIEEIQGLAQEVESQPEKRNAQRM 298

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS-----ISKDEVSR-GMGLLTL 355
           +A E+T +VHG E  E+A   +   F   I +     +      +   +V    M L+  
Sbjct: 299 LAKEVTELVHGVEARERAEKISQALFTGGIANLTAKEVEEGFSDVPSADVEDQEMLLVDA 358

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           ++K G  +S  +AR  ++S A+ +N    ++  L +   D   +  I +  GKKN+ +  
Sbjct: 359 LIKVGAVSSRRQARESMESGAVYVNGIRQTDTTLTVAQLDKIESRFIVIRRGKKNYYLVK 418

Query: 416 LC 417
           L 
Sbjct: 419 LV 420


>gi|27468324|ref|NP_764961.1| tyrosyl-tRNA synthetase [Staphylococcus epidermidis ATCC 12228]
 gi|57867255|ref|YP_188865.1| tyrosyl-tRNA synthetase [Staphylococcus epidermidis RP62A]
 gi|282875850|ref|ZP_06284717.1| tyrosine--tRNA ligase [Staphylococcus epidermidis SK135]
 gi|293366325|ref|ZP_06613005.1| tyrosine-tRNA ligase [Staphylococcus epidermidis M23864:W2(grey)]
 gi|81674179|sp|Q5HNH6|SYY_STAEQ RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|81843652|sp|Q8CS48|SYY_STAES RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|27315870|gb|AAO05005.1|AE016748_239 tyrosyl-tRNA synthetase [Staphylococcus epidermidis ATCC 12228]
 gi|57637913|gb|AAW54701.1| tyrosyl-tRNA synthetase [Staphylococcus epidermidis RP62A]
 gi|281294875|gb|EFA87402.1| tyrosine--tRNA ligase [Staphylococcus epidermidis SK135]
 gi|291319563|gb|EFE59929.1| tyrosine-tRNA ligase [Staphylococcus epidermidis M23864:W2(grey)]
 gi|329737273|gb|EGG73527.1| tyrosine--tRNA ligase [Staphylococcus epidermidis VCU028]
 gi|329737483|gb|EGG73736.1| tyrosine--tRNA ligase [Staphylococcus epidermidis VCU045]
          Length = 421

 Score =  490 bits (1262), Expect = e-136,   Method: Composition-based stats.
 Identities = 142/421 (33%), Positives = 227/421 (53%), Gaps = 20/421 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            +  L  RG I+Q ++   ++ L ++  VT Y G D TA SLH GHL   + L   Q+ G
Sbjct: 5   LIEDLKWRGLIYQQTDEEGIEELLNKEQVTLYCGADPTADSLHIGHLLPFLTLRRFQEHG 64

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+PI L+GGGT +IGDPS + E R +    +++ N++ +        ++G+ K  A ++N
Sbjct: 65  HRPIVLIGGGTGMIGDPSGKSEERVLQTESQVEANVKGLSNQMHRLFEFGSDKG-AKLVN 123

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N+ WL  I  I  LR+ G    VN ML  +S+++RL  E  +S+ EF Y ILQA DF  L
Sbjct: 124 NKDWLGQISLISFLRDYGKHVGVNYMLGKDSIQTRL--EHGISYTEFTYTILQAIDFGYL 181

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLG-ERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
            +  +C++Q+GGSDQWGNI  GI+L        + + LT PL+T + G K GK+ SGA+W
Sbjct: 182 NRELNCKIQVGGSDQWGNITSGIELMRRMYGQTEAYGLTIPLVTKSDGKKFGKSESGAVW 241

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA--KLQGKEINEAKKIIAT 304
           L+ E TSPY F+Q+W N  D DV+ F K  T L   EI+R+   K +   + EA+K +A 
Sbjct: 242 LDPEKTSPYEFYQFWINQSDEDVIKFLKYFTFLEKEEINRLEQSKNEAPHLREAQKALAE 301

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLT 354
            +T  +HG    + A   +   F   + S          + +P +++S    ++   ++ 
Sbjct: 302 NVTKFIHGEAALKDAIRISKALFSGDLKSLSAKELKEGFKDVPQVTLS----TKTTNIVE 357

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +++ G A+S  +AR  + + AI IN     +   ++  +D        +  GKK + + 
Sbjct: 358 ALIETGIASSKRQAREDVNNGAIYINGERQQSVDYELSSKDLIEDEITIIRRGKKKYFMV 417

Query: 415 H 415
           +
Sbjct: 418 N 418


>gi|154493400|ref|ZP_02032720.1| hypothetical protein PARMER_02737 [Parabacteroides merdae ATCC
           43184]
 gi|154086610|gb|EDN85655.1| hypothetical protein PARMER_02737 [Parabacteroides merdae ATCC
           43184]
          Length = 430

 Score =  490 bits (1261), Expect = e-136,   Method: Composition-based stats.
 Identities = 149/428 (34%), Positives = 233/428 (54%), Gaps = 22/428 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L+ RG I  +    E      + + +AY+G D TA SLH GHL  +M+L  LQ+ 
Sbjct: 2   NFVEELTWRGMIADMMPGTE--EQLQKEMTSAYVGIDPTADSLHIGHLVSVMMLKHLQRA 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG-TGKTDALM 125
           GH+PI+L+GG T +IGDPS +   R ++    ++ N + IK   S F+ +       A +
Sbjct: 60  GHRPIALVGGATGMIGDPSMKSAERNLLDEATLRHNQDSIKKQLSKFLDFDSDAPNAAKL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ--SLSFLEFNYMILQAYD 183
           +NN  W+    +++ +R+IG   +VN M++ ESV+ RL RE    +SF EF+Y +LQ YD
Sbjct: 120 VNNYDWMKDYSFLNFIRDIGKHITVNYMMAKESVKKRLSRESSVGMSFTEFSYQLLQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           ++ L ++  CRLQMGG+DQWGNI  G +L  R    + FALT PL+T A G K GKT SG
Sbjct: 180 YMYLYEHEGCRLQMGGTDQWGNITTGTELIRRKLGGEAFALTCPLITKADGGKFGKTESG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKI 301
            +WL++  TSPY F+Q+W N+ DAD   + K  T LP  EID     + +   +   +K 
Sbjct: 240 NVWLDRRYTSPYKFYQFWLNVSDADAAKYIKIFTDLPKEEIDALIKEQEEAPHLRPLQKR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQ--------------HMPTISISKDEVS 347
           +A E+T MVH +E+ + A  A+   F  S                   +P   +S++E+S
Sbjct: 300 LAKEVTVMVHSQEDYDAAVEASNILFGNSTSEALKHLDEQTLLDVFNGVPQFEVSREELS 359

Query: 348 RGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+  + L  + A    S  E R+ ++S  I +N   ++++ + I          + +  
Sbjct: 360 AGVKAIDLFTEKAAIFPSKGEMRKLVQSGGISVNKEKLTDQDMVIDCSSLLDEKYLLVQR 419

Query: 407 GKKNHIIC 414
           GKKN+ + 
Sbjct: 420 GKKNYYLL 427


>gi|73662343|ref|YP_301124.1| tyrosyl-tRNA synthetase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
 gi|97202126|sp|Q49YG2|SYY_STAS1 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|72494858|dbj|BAE18179.1| tyrosyl-tRNA synthetase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
          Length = 420

 Score =  490 bits (1261), Expect = e-136,   Method: Composition-based stats.
 Identities = 143/421 (33%), Positives = 225/421 (53%), Gaps = 20/421 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L  RG I+Q ++   ++ + ++  VT Y G D TA SLH GHL   + L   Q+ G
Sbjct: 5   LLEDLKWRGLIYQQTDESGIENILNKEQVTLYCGADPTADSLHIGHLLPFLTLRRFQEHG 64

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+P+ L+GGGT +IGDPS + E R +    +++ N++ I        ++ T K  A ++N
Sbjct: 65  HRPLVLIGGGTGMIGDPSGKSEERTLQTEAQVETNVQGINKQMHKIFEFDTEKG-AKLVN 123

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N+ WL  I  ID LR+ G    VN ML  +S+++RL  E  +S+ EF Y ILQA DF  L
Sbjct: 124 NKDWLGQISLIDFLRDYGKHVGVNYMLGKDSIQTRL--EHGISYTEFTYTILQAIDFGHL 181

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLG-ERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
            + Y+C++Q+GGSDQWGNI  GI+L        + + LT PL+  + G K GKT  GA+W
Sbjct: 182 NRTYNCKVQVGGSDQWGNITSGIELMRRMYGQTEAYGLTIPLVVKSDGKKFGKTEGGAVW 241

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIAT 304
           L+   TSPY F+Q+W N  D DV+ F K  T L   EI+ + K   +   + EA+K +A 
Sbjct: 242 LDAAKTSPYEFYQFWINTTDDDVIKFLKYFTFLEQEEIEALEKSLNEAPHLREAQKALAE 301

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLT 354
            +T  +HG++  + A   +   F   + S          + +P + +S    S    ++ 
Sbjct: 302 NVTRFIHGQDALDDAIRISQALFAGDLQSLSASELKEGFKDVPQVELS----SETRNIVE 357

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +IV+ G ++S  +AR  + + AI IN     +   ++  +D        +  GKK + + 
Sbjct: 358 VIVETGISSSKRQAREDVNNGAIYINGIRQQDVNYELTSEDKIENEFTIIRRGKKKYFMV 417

Query: 415 H 415
           +
Sbjct: 418 N 418


>gi|331268714|ref|YP_004395206.1| tyrosyl-tRNA synthetase [Clostridium botulinum BKT015925]
 gi|329125264|gb|AEB75209.1| tyrosyl-tRNA synthetase [Clostridium botulinum BKT015925]
          Length = 406

 Score =  490 bits (1261), Expect = e-136,   Method: Composition-based stats.
 Identities = 172/410 (41%), Positives = 257/410 (62%), Gaps = 7/410 (1%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L ERG+I Q ++  E+  L  +  +T YIG+D TA SLH GH   +M +  +Q+ 
Sbjct: 3   NVFDTLMERGYIKQTTHEEEIRELLGKEKITFYIGFDPTADSLHVGHFIAMMFMAHMQRA 62

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI+L+GGGT++IGDPS + + R+M+  ++I  ++  IK     FI +   K  A+++
Sbjct: 63  GHRPIALVGGGTAMIGDPSGKTDMRKMLTKEQIDVHVAGIKKQLGRFIDFSDDK--AILV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL   KY++ +REIG  FSVN+ML+ E  + RL  E+ LSFLEFNYM++QAYDF+E
Sbjct: 121 NNADWLLDAKYVEFIREIGIHFSVNKMLTAECFKQRL--EKGLSFLEFNYMLMQAYDFLE 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + Y C +++GG DQW N+I G+DL  R +    FA+T  LLT + G KMGKT+ GA+W
Sbjct: 179 LNRKYGCVMELGGDDQWSNMIAGMDLIRRKERKPAFAMTCSLLTNSEGQKMGKTVGGALW 238

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           L+ E TSPY+F+QYWRN+ DADV      LT +PM E+ R++ L+G  INEAKK++A E+
Sbjct: 239 LDAEKTSPYDFYQYWRNVADADVEKCLSLLTFVPMDEVKRLSALEGAAINEAKKVLAFEV 298

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
           T +VHG EEA KA  AA   F       ++PT+ ISKD +  G  LL +++      S  
Sbjct: 299 TKLVHGEEEARKAQAAAEALFSGGADMSNVPTVEISKDAI--GTVLLEILLNGKVIPSKK 356

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           E RR ++   + +N+  +++  + ++  D    G+  +  GKK +    +
Sbjct: 357 EGRRLIEQGGLYMNDENVTDPNVTLEESDL-KDGSALIKKGKKKYYRIVV 405


>gi|306828225|ref|ZP_07461486.1| tyrosine--tRNA ligase [Streptococcus pyogenes ATCC 10782]
 gi|304429603|gb|EFM32651.1| tyrosine--tRNA ligase [Streptococcus pyogenes ATCC 10782]
          Length = 418

 Score =  490 bits (1261), Expect = e-136,   Method: Composition-based stats.
 Identities = 144/417 (34%), Positives = 225/417 (53%), Gaps = 11/417 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L  RG + Q ++ + L    ++G V+ Y GYD TA SLH GHL  ++    LQ  
Sbjct: 2   NIFEELKARGLVFQTTDEQALVKALTEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP +L+GG T +IGDPSF+D  R +   + + E  +KIKG  S+F+ +  G   A ++
Sbjct: 62  GHKPYALVGGATGLIGDPSFKDAERSLQTKETVLEWSDKIKGQLSTFLDFENGDNKAELV 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I +ID LR++G +F+VN M+S +SV+ R+  E  +S+ EF Y I+Q YDF E
Sbjct: 122 NNYDWFSQISFIDFLRDVGKYFTVNYMMSKDSVKKRI--ETGISYTEFAYQIMQGYDFYE 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L   ++  LQ+GGSDQWGN+  G +L  +        +T PL+T ++G K GK+   A+W
Sbjct: 180 LNDKHNVTLQIGGSDQWGNMTAGTELLRKKADKTGHVMTVPLITDSTGKKFGKSEGNAVW 239

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIAT 304
           L+ + TSPY  +Q+W N+ D D V F K  T L + EI  +        +E  A+K +A 
Sbjct: 240 LDADKTSPYEMYQFWLNVMDDDAVRFLKIFTFLSLDEIAEIETQFNAARHERLAQKTLAR 299

Query: 305 EITTMVHGREEAEKAATAAMECFDMSI-------HSQHMPTISISKDEVSRGMGLLTLIV 357
           E+ T+VHG E  ++A     + F  +I         Q +  +     +    + L+ ++V
Sbjct: 300 EVVTLVHGEEVYKQALNITEQLFAGNIKNLSANELKQGLSNVPNYHVQSEDSLNLVDMLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            AG + S  +AR  +++ AI IN   + +   Q+   D        +  GKK + + 
Sbjct: 360 TAGISPSKRQAREDVQNGAIYINGDRVQDLDYQLSNDDKIDDQLTVIRRGKKKYAVL 416


>gi|218258724|ref|ZP_03475033.1| hypothetical protein PRABACTJOHN_00688 [Parabacteroides johnsonii
           DSM 18315]
 gi|218225250|gb|EEC97900.1| hypothetical protein PRABACTJOHN_00688 [Parabacteroides johnsonii
           DSM 18315]
          Length = 430

 Score =  490 bits (1261), Expect = e-136,   Method: Composition-based stats.
 Identities = 150/428 (35%), Positives = 233/428 (54%), Gaps = 22/428 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L+ RG I  +    E      + + +AY+G D TA SLH GHL  +M+L  LQ+ 
Sbjct: 2   NFVEELTWRGMIADMMPGTE--EQLQKEMTSAYVGIDPTADSLHIGHLVSVMMLKHLQRA 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG-TGKTDALM 125
           GH+PI+L+GG T +IGDPS +   R ++    ++ N + IK   S F+ +       A +
Sbjct: 60  GHRPIALVGGATGMIGDPSMKSAERNLLDEATLRHNQDSIKKQLSKFLDFDSDAPNAAKL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ--SLSFLEFNYMILQAYD 183
           +NN  W+    +++ +R+IG   +VN M++ ESV+ RL RE    +SF EF+Y +LQ YD
Sbjct: 120 VNNYDWMKDYSFLNFIRDIGKHITVNYMMAKESVKKRLSRESSVGMSFTEFSYQLLQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           ++ L ++  CRLQMGG+DQWGNI  G +L  R    + FALT PL+T A G K GKT SG
Sbjct: 180 YMYLYEHEGCRLQMGGTDQWGNITTGTELIRRKLGGEAFALTCPLITKADGGKFGKTESG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKI 301
            +WL++  TSPY F+Q+W N+ DAD   + K  T LP  EID     + +   +   +K 
Sbjct: 240 NVWLDRRYTSPYKFYQFWLNVSDADAAKYIKIFTDLPKDEIDALIKEQEEAPHLRPLQKR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQ--------------HMPTISISKDEVS 347
           +A E+T MVH +E+ + A  A+   F  S                   +P   +S+DE+S
Sbjct: 300 LAKEVTIMVHSQEDYDAAVEASNILFGNSTSEALKHLDEQTLLDVFNGVPQFEVSRDELS 359

Query: 348 RGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+  + L  + A    S  E R+ ++S  I +N   ++++ + I          + +  
Sbjct: 360 AGVKAIDLFTEKAAIFPSKGEMRKLVQSGGISVNKEKLTDQDMVIDCSSLLDEKYLLVQR 419

Query: 407 GKKNHIIC 414
           GKKN+ + 
Sbjct: 420 GKKNYYLL 427


>gi|213966317|ref|ZP_03394499.1| tyrosyl-tRNA synthetase [Corynebacterium amycolatum SK46]
 gi|213951023|gb|EEB62423.1| tyrosyl-tRNA synthetase [Corynebacterium amycolatum SK46]
          Length = 434

 Score =  490 bits (1261), Expect = e-136,   Method: Composition-based stats.
 Identities = 153/424 (36%), Positives = 227/424 (53%), Gaps = 15/424 (3%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           + + +  L  RG I+Q ++   L   C +  +T Y G+D T  SLHAGHL  +++L   Q
Sbjct: 15  EQNIIDELQWRGLINQSTDVDALREAC-ENPITLYCGFDPTGDSLHAGHLVPMIMLRRFQ 73

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GH PI+L GG T  IGDP    E R M+    I+ N+E IKG    FI +  G+  A 
Sbjct: 74  LAGHHPIALAGGATGFIGDPRDVGE-RSMLSQDAIEHNLEAIKGQLRRFIDF-EGEAPAT 131

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M+NN  W  ++  ID LR++G  FS+N ML  ++V+ RL+ +  +S+ EF+YM+LQ+ D+
Sbjct: 132 MVNNADWTMNMSVIDFLRDVGKNFSLNTMLDRDTVKRRLESD-GISYTEFSYMLLQSNDY 190

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           V+L +NYDC LQ+GG DQWGNI+ G+DL  R+   K+  LT PL+T A G K GK+  G 
Sbjct: 191 VQLRRNYDCVLQIGGGDQWGNIVSGVDLNRRIDGAKVHGLTVPLVTDAQGQKFGKSTGGG 250

Query: 245 -IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKI 301
            +WL+ E TSPY+++QY+ N  D+ V+ + +  T L   EI        +     EA++ 
Sbjct: 251 KLWLDAEKTSPYSWYQYFLNAGDSVVIDYLRWFTFLTQEEIAEYEVAVAERPFKREAQRR 310

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQ--------HMPTISISKDEVSRGMGLL 353
           +A E+T +VHG E  +    AA   F  +  ++         +    +++         +
Sbjct: 311 LAQEMTNLVHGEEATKAVELAAQALFGRAELTELDETTLAGAVSETEVAEIAEGEPRTAV 370

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            L+V AG A S  EARR +K      NN  I +E  +   +D      I L  GKKN   
Sbjct: 371 DLLVAAGLAKSKGEARRTIKEGGAYANNQRIEDEAWEPAAEDLLHGKWIVLRRGKKNFAG 430

Query: 414 CHLC 417
               
Sbjct: 431 VKFV 434


>gi|242242993|ref|ZP_04797438.1| tyrosyl-tRNA synthetase [Staphylococcus epidermidis W23144]
 gi|242233594|gb|EES35906.1| tyrosyl-tRNA synthetase [Staphylococcus epidermidis W23144]
 gi|319401041|gb|EFV89260.1| tyrosyl-tRNA synthetase [Staphylococcus epidermidis FRI909]
          Length = 421

 Score =  490 bits (1261), Expect = e-136,   Method: Composition-based stats.
 Identities = 141/421 (33%), Positives = 226/421 (53%), Gaps = 20/421 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            +  L  RG I+Q ++   ++ L ++  VT Y G D TA SLH GHL   + L   Q+ G
Sbjct: 5   LIEDLKWRGLIYQQTDEEGIEELLNKEQVTLYCGADPTADSLHIGHLLPFLTLRRFQEHG 64

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+PI L+GGGT +IGDPS + E R +    +++ N++ +        ++ + K  A ++N
Sbjct: 65  HRPIVLIGGGTGMIGDPSGKSEERVLQTESQVEANVKGLSNQMHRLFEFDSDKG-AQLVN 123

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N+ WL  I  I  LR+ G    VN ML  +S+++RL  E  +S+ EF Y ILQA DF  L
Sbjct: 124 NKDWLGQISLISFLRDYGKHVGVNYMLGKDSIQTRL--EHGISYTEFTYTILQAIDFGYL 181

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLG-ERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
            +  +C++Q+GGSDQWGNI  GI+L        + + LT PL+T + G K GK+ SGA+W
Sbjct: 182 NRELNCKIQVGGSDQWGNITSGIELMRRMYGQTEAYGLTIPLVTKSDGKKFGKSESGAVW 241

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA--KLQGKEINEAKKIIAT 304
           L+ E TSPY F+Q+W N  D DV+ F K  T L   EI+R+   K +   + EA+K +A 
Sbjct: 242 LDPEKTSPYEFYQFWINQSDEDVIKFLKYFTFLEKEEINRLEQSKNEAPHLREAQKALAE 301

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLT 354
            +T  +HG    + A   +   F   + S          + +P +++S    ++   ++ 
Sbjct: 302 NVTKFIHGEAALKDAIRISKALFSGDLKSLSAKELKEGFKDVPQVTLS----TKTTNIIE 357

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +++ G A+S  +AR  + + AI IN     +   ++  +D        +  GKK + + 
Sbjct: 358 ALIETGIASSKRQAREDVNNGAIYINGERQQSVDYELSSKDLIEDEITIIRRGKKKYFMV 417

Query: 415 H 415
           +
Sbjct: 418 N 418


>gi|329727870|gb|EGG64320.1| tyrosine--tRNA ligase [Staphylococcus epidermidis VCU144]
          Length = 421

 Score =  490 bits (1261), Expect = e-136,   Method: Composition-based stats.
 Identities = 142/421 (33%), Positives = 227/421 (53%), Gaps = 20/421 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            +  L  RG I+Q ++   ++ L ++  VT Y G D TA SLH GHL   + L   Q+ G
Sbjct: 5   LIEDLKWRGLIYQQTDEEGIEELLNKEQVTLYCGADPTADSLHIGHLLPFLTLRRFQEHG 64

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+PI L+GGGT +IGDPS + E R +    +++ N++ +        ++G+ K  A ++N
Sbjct: 65  HRPIVLIGGGTGMIGDPSGKSEERVLQTESQVEANVKGLSNQMHRLFEFGSDKG-AKLVN 123

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N+ WL  I  I  LR+ G    VN ML  +S+++RL  E  +S+ EF Y ILQA DF  L
Sbjct: 124 NKDWLGQISLISFLRDYGKHVGVNYMLGKDSIQTRL--EHGISYTEFTYTILQAIDFGYL 181

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLG-ERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
            +  +C++Q+GGSDQWGNI  GI+L        + + LT PL+T + G K GK+ SGA+W
Sbjct: 182 NRELNCKIQVGGSDQWGNITSGIELMRRMYGQTEAYGLTIPLVTKSDGKKFGKSESGAVW 241

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA--KLQGKEINEAKKIIAT 304
           L+ E TSPY F+Q+W N  D DV+ F K  T L   EI+R+   K +   + EA+K +A 
Sbjct: 242 LDPEKTSPYEFYQFWINQSDEDVIKFLKYFTFLEKEEINRLEQSKNEAPHLREAQKALAE 301

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLT 354
            +T  +HG    + A   +   F   + S          + +P +++S    ++   ++ 
Sbjct: 302 NVTKFIHGEAALKDAIRISKALFSGDLKSLSAKELKEGFKDVPQVTLS----TKTTNIVE 357

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +++ G A+S  +AR  + + AI IN     +   ++  +D        +  GKK + + 
Sbjct: 358 ALIETGIASSKRQAREDVNNGAIYINGERQQSVDYELSSKDLIEDEITIIRRGKKKYFMV 417

Query: 415 H 415
           +
Sbjct: 418 N 418


>gi|302379435|ref|ZP_07267922.1| tyrosine--tRNA ligase [Finegoldia magna ACS-171-V-Col3]
 gi|302312780|gb|EFK94774.1| tyrosine--tRNA ligase [Finegoldia magna ACS-171-V-Col3]
          Length = 415

 Score =  490 bits (1261), Expect = e-136,   Method: Composition-based stats.
 Identities = 171/411 (41%), Positives = 256/411 (62%), Gaps = 5/411 (1%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L  RG+  Q +   EL  L  +  V  YIG+D TA SL  GH  QLM++  +Q  
Sbjct: 10  NVFDELVARGYFEQATYEDELRDLLGKERVPFYIGFDATADSLTIGHFIQLMVMMRMQAH 69

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH PI L+GGGT++IGDPS R++ R +M  + I +N  +     + FI +G  K  A + 
Sbjct: 70  GHIPICLLGGGTTMIGDPSGRNDMRSIMTKEVIDKNARRFYSQMTRFIDFGEDK--AYIE 127

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN+ WL ++ ++D +REIG  FSVN+ML+ ES ++R+K  Q L+F EF+YM++Q+YD++ 
Sbjct: 128 NNKDWLLNLNFLDFMREIGVHFSVNQMLTLESYKNRMK--QGLTFFEFSYMLMQSYDYLV 185

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + Y C+LQMGGSDQW NI+ G DL  +L+  K++A+T  LLTTA G KMGK+  GA+W
Sbjct: 186 LYRKYGCKLQMGGSDQWSNILGGYDLVRKLENDKVYAMTFKLLTTADGVKMGKSQKGAVW 245

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           L++  T+PY+ +QY RN+DD DV  F   LT LP  E  R+  L+G EIN+AK+++A E+
Sbjct: 246 LDENKTTPYDLFQYMRNVDDRDVEKFLLMLTFLPTDECKRLGSLEGSEINKAKEVLAFEV 305

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
             +VHG E+AE+A   A   F+ ++  ++MPT  +   +   G+GLL L+   G   S +
Sbjct: 306 CKLVHGEEKAEEARQTANALFNSNVVDENMPTTEMKALDFENGIGLLNLLTMTGLTQSNS 365

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           EARR +  N I +N++  ++ K  I + DF+    + +  GKK +    L 
Sbjct: 366 EARRLVTQNGISVNDNKEADPKRVITIHDFNDD-ELIIKKGKKVYHRVKLV 415


>gi|187933845|ref|YP_001887352.1| tyrosyl-tRNA synthetase [Clostridium botulinum B str. Eklund 17B]
 gi|254783584|sp|B2TQ95|SYY_CLOBB RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|187721998|gb|ACD23219.1| tyrosine--tRNA ligase [Clostridium botulinum B str. Eklund 17B]
          Length = 406

 Score =  490 bits (1261), Expect = e-136,   Method: Composition-based stats.
 Identities = 177/411 (43%), Positives = 254/411 (61%), Gaps = 7/411 (1%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           ++ L  L +RG+I Q ++  E   L     VT YIG+D TA SLH GH   +M +  +Q+
Sbjct: 2   ANVLDELLDRGYIKQFTHEEETRKLLENEKVTFYIGFDPTADSLHVGHFIAMMFMAHMQR 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+PI+L+GGGT+++GDPS + + R+M+  ++IQ N++ IK     FI +   K  AL+
Sbjct: 62  AGHRPIALLGGGTAMVGDPSGKTDMRKMLTKEQIQHNVDSIKKQMERFIDFSDDK--ALI 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  WL  + Y+D LRE+G  FSVNRMLS E  + RL  E+ LSFLEFNYM++Q YDF 
Sbjct: 120 VNNADWLLDLNYVDFLREVGVHFSVNRMLSAECFKQRL--EKGLSFLEFNYMLMQGYDFY 177

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L + Y C++++GG DQW N+I G++L  R       A+T  LLT + G KMGKT+ GA+
Sbjct: 178 VLNQKYGCKMELGGDDQWSNMIAGVELVRRKAQGDAMAMTCTLLTNSQGQKMGKTVGGAL 237

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
           WL+ +  SP++F+QYWRN+DDADV      LT LPM E+ R+  L+G EIN AKKI+A E
Sbjct: 238 WLDADKVSPFDFYQYWRNVDDADVEKCLALLTFLPMDEVRRLGALEGAEINGAKKILAYE 297

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           +T +VHG EEA+KA  AA   F       ++PT+ ISK+++  G  +L +I K     S 
Sbjct: 298 VTKLVHGDEEAKKAEEAANALFSGGADMSNVPTVIISKEDL--GSTVLDVIAKVKIVPSK 355

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            E RR ++   + IN   I+     +   DF   G+  +  GKKN+    +
Sbjct: 356 KEGRRLIEQGGLSINGEKITELTRTLNDDDF-KDGSALIKRGKKNYNKIEI 405


>gi|229020309|ref|ZP_04177076.1| Tyrosyl-tRNA synthetase [Bacillus cereus AH1273]
 gi|229026534|ref|ZP_04182885.1| Tyrosyl-tRNA synthetase [Bacillus cereus AH1272]
 gi|228734760|gb|EEL85403.1| Tyrosyl-tRNA synthetase [Bacillus cereus AH1272]
 gi|228740981|gb|EEL91212.1| Tyrosyl-tRNA synthetase [Bacillus cereus AH1273]
          Length = 420

 Score =  490 bits (1261), Expect = e-136,   Method: Composition-based stats.
 Identities = 147/424 (34%), Positives = 221/424 (52%), Gaps = 21/424 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG ++Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  
Sbjct: 2   NIIDELEWRGAVNQQTDEEGLRKLVEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P+ L+GG T  IGDPS R   R++   + +Q N++ +         +G G ++  M+
Sbjct: 62  GHHPVILIGGATGTIGDPSGRQSERQLQTLEVVQHNVDALTVQMKKLFDFG-GNSEVKMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I  I+ LR+ G  FS+N ML+ + V SRL  +  +SF EF Y ILQA DF  
Sbjct: 121 NNYDWTHEINIIEFLRDYGKNFSINSMLAKDIVASRL--DTGISFTEFTYQILQAMDFHH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKLFALTSPLLTTASGTKMGKTLSGA 244
           L    D +LQ+GGSDQWGNI  G+DL  +L+    K+F LT PLL  + GTK GK+  GA
Sbjct: 179 LYTKEDVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSAGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKII 302
           +WL+ E T+P+ F+Q+W N DD DV+ + K  T L    ID +A          EA+K++
Sbjct: 239 VWLDPEKTTPFEFYQFWVNTDDRDVIKYLKYFTFLQKERIDELAAKVETEPHKREAQKVL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGL 352
           A E+T  VHG E   +A       F   I S          + MPT   SK++      +
Sbjct: 299 AEEMTKFVHGEEAFLQAVKITAALFSGDIKSLTADEIEQGFKEMPTFESSKEK----KNI 354

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           +  +V  G   S  +AR  + + AI +N   +++    + +++      I +  GKKN+ 
Sbjct: 355 VEWLVDLGIEPSRRQAREDINNGAISMNGEKVTDVATDVTVENSFDGRFIIIRKGKKNYS 414

Query: 413 ICHL 416
           +  L
Sbjct: 415 LVKL 418


>gi|75760562|ref|ZP_00740596.1| Tyrosyl-tRNA synthetase [Bacillus thuringiensis serovar israelensis
           ATCC 35646]
 gi|74491958|gb|EAO55140.1| Tyrosyl-tRNA synthetase [Bacillus thuringiensis serovar israelensis
           ATCC 35646]
          Length = 420

 Score =  490 bits (1261), Expect = e-136,   Method: Composition-based stats.
 Identities = 144/420 (34%), Positives = 216/420 (51%), Gaps = 13/420 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG ++Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  
Sbjct: 2   NIIDELEWRGAVNQQTDEEGLRKLVEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P+ L+GG T  IGDPS R   R++   + +Q N++ +         +G G ++  M+
Sbjct: 62  GHHPVILIGGATGTIGDPSGRQSERQLQTLEVVQHNVDALTAQMKKLFDFG-GNSEVKMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I  I+ LR+ G  FS+N ML+ + V SRL  +  +SF EF Y ILQA DF  
Sbjct: 121 NNYXWTHEINIIEFLRDYGKNFSINSMLAKDIVASRL--DTGISFTEFTYQILQAMDFHH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKLFALTSPLLTTASGTKMGKTLSGA 244
           L    D +LQ+GGSDQWGNI  G+DL  +L+    K+F LT PLL  + GTK GK+  GA
Sbjct: 179 LYTKEDVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSAGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKII 302
           +WL+ E T+P+ F+Q+W N DD DV+ + K  T L    ID +A          EA+K++
Sbjct: 239 VWLDPEKTTPFEFYQFWVNTDDRDVIKYLKYFTFLKKERIDELAAKVEVEPHKREAQKVL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVS------RGMGLLTLI 356
           A E+T  VHG E   +A       F   I S     I     E+           ++  +
Sbjct: 299 AEEMTKFVHGEEALLQAEKITAALFSGDIKSLTADEIEQGFKEMPTFHSSKETKNIVEWL 358

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V  G   S  +AR  + + AI +N   +++    + +++      I +  GKKN+ +  L
Sbjct: 359 VDLGIEPSRRQAREDINNGAISMNGEKVTDVGTDVTVENSFDGRFIIIRKGKKNYSLVKL 418


>gi|319900644|ref|YP_004160372.1| tyrosyl-tRNA synthetase [Bacteroides helcogenes P 36-108]
 gi|319415675|gb|ADV42786.1| tyrosyl-tRNA synthetase [Bacteroides helcogenes P 36-108]
          Length = 430

 Score =  490 bits (1261), Expect = e-136,   Method: Composition-based stats.
 Identities = 151/428 (35%), Positives = 227/428 (53%), Gaps = 22/428 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG +H +    E   L ++  VTAYIG+D TA SLH GHL  +M+L   Q+ 
Sbjct: 2   NFVEELRWRGMLHDMMPGTE--ELLAKEQVTAYIGFDPTADSLHIGHLCSVMILRHFQRC 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG-TGKTDALM 125
           GHKP++L+GG T +IGDPS +   R ++  + +  N+E +K   + F+ +       A +
Sbjct: 60  GHKPLALIGGATGMIGDPSGKSAERNLLTEEILHHNMEGMKKQLAKFLDFESDAPNRAEL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQAYD 183
           +NN  W+ +  ++D  RE+G   +VN M++ +SV+ RL  E    LSF EF Y +LQ YD
Sbjct: 120 VNNYDWMKNFSFLDFAREVGKHITVNYMMAKDSVKKRLNGEARDGLSFTEFTYQLLQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ L +   CRLQMGGSDQWGNI  G +L  R    ++FALTSPL+T A G K GKT SG
Sbjct: 180 FLHLYETKGCRLQMGGSDQWGNITTGAELIRRTNGGEVFALTSPLITKADGGKFGKTESG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKKI 301
            IWL+   TSPY F+Q+W N+ DAD   + K  T L   EI+ +         +   +K 
Sbjct: 240 NIWLDPRYTSPYKFYQFWLNVSDADAARYIKIFTALSKEEIEALISEHEAAPHLRVLQKR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDEVS 347
           +A E+T MVH  E+   A  A+   F  +                 + +P   +S++ +S
Sbjct: 300 LAKEVTIMVHSEEDYNAAVDASGILFGNATSEALRKLDEDTLLAVFEGVPQFEVSREALS 359

Query: 348 RGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+  + L V+ A    S  E R+ ++   + +N   +      I   D      + +  
Sbjct: 360 AGVKAVDLFVEDAAVFASKGEMRKLVQGGGVSLNKEKLEAFDRVITSADLLDEKYLLVQR 419

Query: 407 GKKNHIIC 414
           GKKN+ + 
Sbjct: 420 GKKNYYLV 427


>gi|228999836|ref|ZP_04159408.1| Tyrosyl-tRNA synthetase [Bacillus mycoides Rock3-17]
 gi|228759778|gb|EEM08752.1| Tyrosyl-tRNA synthetase [Bacillus mycoides Rock3-17]
          Length = 420

 Score =  490 bits (1261), Expect = e-136,   Method: Composition-based stats.
 Identities = 146/424 (34%), Positives = 218/424 (51%), Gaps = 21/424 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  R  I+Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  
Sbjct: 2   NIIDELEWRDAINQQTDVDGLRELVEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P+ L+GG T  IGDPS R   R++   +++Q N++ +         +G G ++  M+
Sbjct: 62  GHHPVILIGGATGTIGDPSGRQTERQLQTLEQVQHNVDALTAQMQKLFDFG-GNSEVKMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I  I+ LR+ G  FS+N ML+ + V SRL  +  +SF EF Y ILQA DF  
Sbjct: 121 NNYDWTHQINIIEFLRDYGKNFSINSMLAKDIVASRL--DTGISFTEFTYQILQAMDFHH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKLFALTSPLLTTASGTKMGKTLSGA 244
           L K    +LQ+GGSDQWGNI  G+DL  +L+    K+F LT PLL  + GTK GK+  GA
Sbjct: 179 LYKEEGVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSAGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKII 302
           +WL+ E T+P+ F+Q+W N DD DVV + K  T L    ID   +         EA+K++
Sbjct: 239 VWLDPEKTTPFEFYQFWLNTDDRDVVKYLKYFTFLTKDRIDELVVKVQTEPHKREAQKVL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGL 352
           A E+T  VHG     +A       F   I S          + MPT   SK+       +
Sbjct: 299 AEEMTKFVHGEHALSQALKITEALFSGDIKSLTADEIEQGFKDMPTFHASKET----KNI 354

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           +  +V  G   S  +AR  + + AI +N   +++    + +++      I +  GKKN+ 
Sbjct: 355 VEWLVDLGIEPSRRQAREDINNGAISMNGEKVTDVNTHVTVENSFDERFIIIRKGKKNYS 414

Query: 413 ICHL 416
           +  L
Sbjct: 415 LVKL 418


>gi|95929912|ref|ZP_01312653.1| tyrosyl-tRNA synthetase [Desulfuromonas acetoxidans DSM 684]
 gi|95134208|gb|EAT15866.1| tyrosyl-tRNA synthetase [Desulfuromonas acetoxidans DSM 684]
          Length = 430

 Score =  489 bits (1260), Expect = e-136,   Method: Composition-based stats.
 Identities = 148/429 (34%), Positives = 238/429 (55%), Gaps = 22/429 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L+ RG IH I    E      + + +AY+G D TA SLH GHL  +M+L   Q  
Sbjct: 2   NFVQELTWRGMIHDIMPGTE--EQLQKEMTSAYVGIDPTADSLHIGHLVSVMMLKHFQLA 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG-TGKTDALM 125
           GHKPI+L+GG T +IGDPS +   R ++  + ++ N + IK   + F+ +       A +
Sbjct: 60  GHKPIALVGGATGMIGDPSGKSAERNLLDEKTLRHNEDCIKKQLAKFLDFDSDAANAAEL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ--SLSFLEFNYMILQAYD 183
           +NN  W+    +++ +R+IG   +VN M++ +SV+ RL  E    LSF EF Y ++Q  D
Sbjct: 120 VNNYDWMKEFSFLEFIRDIGKHITVNYMMAKDSVKKRLSDESKVGLSFTEFTYQLVQGTD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ L +  +C+LQMGGSDQWGNI  G +L  R ++ + FALT PL+T A G K GKT SG
Sbjct: 180 FLHLYREKNCKLQMGGSDQWGNITTGTELVRRKESGEAFALTCPLITKADGGKFGKTESG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKI 301
            +WL+ ++T+PY F+Q+W N+ DAD   + K  T L   E+  + K Q    +E   +K 
Sbjct: 240 NVWLDPKLTTPYKFYQFWLNVSDADAEKYIKIFTLLNKDEVAALVKEQEAAPHERPLQKR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDEVS 347
           +A E+T MVH  EE +KA  A+   F  +                 + +PT  ++++++ 
Sbjct: 300 LAREVTCMVHSEEEYDKAVEASQILFGKATTESLARLDKETFLSVFEGVPTFDVARNKID 359

Query: 348 RGMGLLTLI-VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+ ++ L+  +     S  E RR +K N + +N + +++++  +   D  +   I +  
Sbjct: 360 NGVPVVELLAAETAAFPSKGELRRTIKGNGLSLNKAKVTDQEYLVTANDLINGSYILVQK 419

Query: 407 GKKNHIICH 415
           GKKN+ I  
Sbjct: 420 GKKNYYIIE 428


>gi|225869573|ref|YP_002745520.1| tyrosyl-tRNA synthetase [Streptococcus equi subsp. equi 4047]
 gi|254783638|sp|C0M6G7|SYY_STRE4 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|225698977|emb|CAW92036.1| putative tyrosyl-tRNA synthetase [Streptococcus equi subsp. equi
           4047]
          Length = 418

 Score =  489 bits (1260), Expect = e-136,   Method: Composition-based stats.
 Identities = 139/417 (33%), Positives = 222/417 (53%), Gaps = 11/417 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L  RG + Q ++   L    ++G V+ Y GYD TA SLH GHL  ++    LQ  
Sbjct: 2   NIFEELKARGLVFQTTDEEALVKALTEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP +L+GG T +IGDPSF+D  R +   + + +  +KIK   S F+ +  G+  A ++
Sbjct: 62  GHKPYALVGGATGLIGDPSFKDAERILQTKETVLDWSQKIKEQLSCFLDFDNGENKAELV 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I +ID LR++G  F++N M+S +SV+ R+  E  +S+ EF Y ++Q YDF E
Sbjct: 122 NNYDWFSQISFIDFLRDVGKHFTINYMMSKDSVKKRI--ETGISYTEFAYQVMQGYDFYE 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L   ++  LQ+GGSDQWGN+  G +L  +        +T PL+T A+G K GK+   AIW
Sbjct: 180 LNAKHNVTLQIGGSDQWGNMTAGTELLRKKADKTGHVMTVPLITDATGKKFGKSEGNAIW 239

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIAT 304
           L+ + TSPY  +Q+W N+ D D V F K  T L + EI  + +      +E  A+K +A 
Sbjct: 240 LDAKKTSPYEMYQFWLNVMDDDAVRFLKIFTFLSLDEIAAIEEQFNAARHERLAQKTLAR 299

Query: 305 EITTMVHGREEAEKAATAAMECFDMSI-------HSQHMPTISISKDEVSRGMGLLTLIV 357
           E+ T+VHG    ++A     + F  +I         Q +  +   + +    + ++ ++V
Sbjct: 300 EVVTLVHGEAAYQQALNITEQLFAGAIKNLSAAELKQGLSNVPNYQVQAEDSLNIVDMLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            AG + S  +AR  L++ AI +N   + +    +   D        +  GKK + + 
Sbjct: 360 TAGISPSKRQAREDLQNGAIYLNGERLQDLDYSLSTADRIDNQLTVIRRGKKKYAVL 416


>gi|229062739|ref|ZP_04200044.1| Tyrosyl-tRNA synthetase [Bacillus cereus AH603]
 gi|228716499|gb|EEL68202.1| Tyrosyl-tRNA synthetase [Bacillus cereus AH603]
          Length = 420

 Score =  489 bits (1260), Expect = e-136,   Method: Composition-based stats.
 Identities = 146/424 (34%), Positives = 219/424 (51%), Gaps = 21/424 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG ++Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  
Sbjct: 2   NIIDELEWRGAVNQQTDEEGLRKLVEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P+ L+GG T  IGDPS R   R++   + +Q N++ +         +G G ++  M+
Sbjct: 62  GHHPVILIGGATGTIGDPSGRQSERQLQTLEVVQHNVDALTAQMKKLFDFG-GNSEVKMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I  I+ LR+ G  FS+N ML+ + V SRL  +  +SF EF Y ILQA DF  
Sbjct: 121 NNYDWTHKINIIEFLRDYGKNFSINSMLAKDIVASRL--DTGISFTEFTYQILQAMDFHH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKLFALTSPLLTTASGTKMGKTLSGA 244
           L    D +LQ+GGSDQWGNI  G+DL  +L+    K+F LT PLL  + GTK GK+  GA
Sbjct: 179 LYTKEDVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSAGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA--KLQGKEINEAKKII 302
           +WL+ E T P+ F+Q+W N +D DV+ + K  T L    ID +A          EA+K++
Sbjct: 239 VWLDPEKTKPFEFYQFWVNTNDRDVIKYLKYFTFLTKERIDELAVKVETEPHKREAQKVL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGL 352
           A E+T  VHG E   +A       F   I S          + MPT   SK+       +
Sbjct: 299 AEEMTKFVHGEEAFLQAVKITAALFSGDIKSLTADEIEQGFKEMPTFQSSKET----KNI 354

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           +  +V  G   S  +AR  + + AI +N   +++    + +++      I +  GKKN+ 
Sbjct: 355 VEWLVDLGIEPSRRQAREDINNGAISMNGEKVTDVSRDVTVENSFDGRFIIIRKGKKNYS 414

Query: 413 ICHL 416
           +  L
Sbjct: 415 LVEL 418


>gi|331002727|ref|ZP_08326242.1| tyrosyl-tRNA synthetase [Lachnospiraceae oral taxon 107 str. F0167]
 gi|330407140|gb|EGG86644.1| tyrosyl-tRNA synthetase [Lachnospiraceae oral taxon 107 str. F0167]
          Length = 408

 Score =  489 bits (1260), Expect = e-136,   Method: Composition-based stats.
 Identities = 164/410 (40%), Positives = 247/410 (60%), Gaps = 6/410 (1%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L  RG I Q++N  E+  + + G  T YIG+D TA SLH GH   L L+  LQ  
Sbjct: 2   NCYDELKARGLIAQVTNEEEISKMINNGKATFYIGFDPTADSLHVGHFMALCLMKRLQMA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           G+KPI+L+GGGT +IGDPS R + R+++  ++I  N E  K   S FI++G  K  A M+
Sbjct: 62  GNKPIALVGGGTGMIGDPSGRSDLRKVLTIEDIDHNCECFKKQMSRFIEFGEDK--ARMV 119

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  + Y++ +R+IG  FSVN ML  +   +R+     LSFLEFNYMILQ+YDF +
Sbjct: 120 NNADWLRDLNYMEFIRDIGPHFSVNNMLRAKCYENRMAN--GLSFLEFNYMILQSYDFYK 177

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L  +Y C +Q GG DQW N++ G +L  R       A+T  LL  + G KMGKT+ GA+W
Sbjct: 178 LFLDYGCNMQFGGDDQWSNMLGGTELIRRKLGKDAHAMTITLLLNSEGKKMGKTVGGAVW 237

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           L+   T+P+ F+QYWRN+ DADV++  + LT LP+ +I+ M+  +G ++NEAK+I+A  +
Sbjct: 238 LDPNKTTPFEFYQYWRNLPDADVLTCLRMLTFLPLEQIEEMSAWEGAKLNEAKEILAMHL 297

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATST 365
           T +VHG+EEA+KA  A+   F       ++PT  +  ++   G + L  ++V +G + + 
Sbjct: 298 TELVHGKEEADKANAASKSLFVGGGDMSNVPTYILQPEDYRDGTIDLSGVLVVSGLSNTR 357

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +EARR+++   + I   +I + K     +DF   G + +  GKKN     
Sbjct: 358 SEARRNIEQGGVSIEGEVIKDVKKTFTKEDFAGEG-LLIKRGKKNFCKVK 406


>gi|117928461|ref|YP_873012.1| tyrosyl-tRNA synthetase [Acidothermus cellulolyticus 11B]
 gi|189083639|sp|A0LUB6|SYY_ACIC1 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|117648924|gb|ABK53026.1| tyrosyl-tRNA synthetase [Acidothermus cellulolyticus 11B]
          Length = 426

 Score =  489 bits (1260), Expect = e-136,   Method: Composition-based stats.
 Identities = 140/423 (33%), Positives = 216/423 (51%), Gaps = 12/423 (2%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L+ RG I Q ++   L    + G +T Y G+D TA SLH GHL Q++ L   Q  G
Sbjct: 4   LLDDLAWRGLIAQSTDLEALRAAMNTGPITVYCGFDPTAPSLHIGHLVQILTLRRFQDAG 63

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY--GTGKTDALM 125
           H+PI+L+GG T +IGDPS R   R +     +    E+I    + F+ +        A+ 
Sbjct: 64  HRPIALVGGATGLIGDPSGRTTERALNDPDVVAGWAERIHRQLAPFLDFTGERAGQPAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  W   +  I+ LR++G  F V RML+ E V +RL+ EQ +S+ EF+Y ILQ+ DF+
Sbjct: 124 VNNLEWTGRLTAIEFLRDVGKHFRVGRMLAKEVVAARLRSEQGISYTEFSYQILQSLDFL 183

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           EL + Y C LQ+GG DQWGN+  GI+L  +++   + AL +PL+T A GTK GKT  GA+
Sbjct: 184 ELYRRYRCVLQIGGIDQWGNLTSGIELIHKVEGVDVHALATPLVTKADGTKFGKTAGGAV 243

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIA 303
           WL+  +TSPY F+Q+W N DD DV ++ +  +     E++ + K  G++      ++ +A
Sbjct: 244 WLDPALTSPYAFYQFWINTDDRDVPAYLRYFSLKNKDELEALEKDAGRDPAARLGQRALA 303

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDE--------VSRGMGLLTL 355
            E+TT+VHG  E  K   A+   F     +   P    +                 ++  
Sbjct: 304 EELTTLVHGATECGKVVAASAALFGRGELAGVEPETLAAALAEAGLVTMPFDPPPRVVDA 363

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +V  G   S + ARR +      +NN  +++   QI            +  G++      
Sbjct: 364 LVATGLVESRSAARRVISEGGAYVNNEKVTDVDAQIDPGRLLHGRWAVIRRGRRAVAGVE 423

Query: 416 LCG 418
             G
Sbjct: 424 RAG 426


>gi|251781560|ref|YP_002995861.1| tyrosyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
 gi|242390188|dbj|BAH80647.1| tyrosyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
          Length = 418

 Score =  489 bits (1260), Expect = e-136,   Method: Composition-based stats.
 Identities = 144/417 (34%), Positives = 224/417 (53%), Gaps = 11/417 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L  RG + Q ++ + L    ++G V+ Y GYD TA SLH GHL  ++    LQ  
Sbjct: 2   NIFEELKARGLVFQTTDEQALVKALTEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP +L+GG T +IGDPSF+D  R +   + + E  +KIKG  S+F+ +  G   A ++
Sbjct: 62  GHKPYALVGGATGLIGDPSFKDAERSLQTKETVLEWSDKIKGQLSTFLDFENGDNKAELV 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I +ID LR++G +F+VN M+S +SV+ R+  E  +S+ EF Y I+Q YDF E
Sbjct: 122 NNYDWFSQISFIDFLRDVGKYFTVNYMMSKDSVKKRI--ETGISYTEFAYQIMQGYDFYE 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L   ++  LQ+GGSDQWGN+  G +L  R        +T PL+T ++G K GK+   A+W
Sbjct: 180 LNNKHNVTLQIGGSDQWGNMTAGTELLRRKADKAGHVMTVPLITDSTGKKFGKSEGNAVW 239

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIAT 304
           L+ + TSPY  +Q+W N+ D D V F K  T L + EI  +        +E  A+K +A 
Sbjct: 240 LDADKTSPYEMYQFWLNVMDDDAVRFLKIFTFLSLDEIADIESQFNAARHERLAQKTLAR 299

Query: 305 EITTMVHGREEAEKAATAAMECFDMSI-------HSQHMPTISISKDEVSRGMGLLTLIV 357
           E+ T+VHG E  ++A     + F  +I         Q +  +     + +  + L+ ++V
Sbjct: 300 EVVTLVHGEEAYKQALNITEQLFAGNIKNLSANELKQGLSNVPNYHVQSADSLNLVDMLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            AG + S  +AR  +++ AI IN   +      +   D        +  GKK + + 
Sbjct: 360 TAGISPSKRQAREDVQNGAIYINGERVQELDYTLSDTDKIDNQLTVVRRGKKKYAVL 416


>gi|29348639|ref|NP_812142.1| tyrosyl-tRNA synthetase [Bacteroides thetaiotaomicron VPI-5482]
 gi|253569018|ref|ZP_04846428.1| tyrosyl-tRNA synthetase [Bacteroides sp. 1_1_6]
 gi|298387008|ref|ZP_06996562.1| tyrosine--tRNA ligase [Bacteroides sp. 1_1_14]
 gi|81443579|sp|Q8A2S5|SYY_BACTN RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|29340544|gb|AAO78336.1| tyrosyl-tRNA synthetase [Bacteroides thetaiotaomicron VPI-5482]
 gi|251841037|gb|EES69118.1| tyrosyl-tRNA synthetase [Bacteroides sp. 1_1_6]
 gi|298260158|gb|EFI03028.1| tyrosine--tRNA ligase [Bacteroides sp. 1_1_14]
          Length = 430

 Score =  489 bits (1260), Expect = e-136,   Method: Composition-based stats.
 Identities = 149/428 (34%), Positives = 225/428 (52%), Gaps = 22/428 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG +  I    E   L ++  VTAY+G D TA SLH GHL  +M+L  LQ+ 
Sbjct: 2   NFVEELRWRGMLQDIMPGTE--ELLNKEQVTAYLGIDPTADSLHIGHLCGVMILRHLQRC 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG-KTDALM 125
           GHKP++L+GG T +IGDPS +   R ++  + ++ N   IK   + F+ + +     A +
Sbjct: 60  GHKPLALIGGATGMIGDPSGKSAERNLLNEETLRHNQACIKKQLAKFLDFESDVPNRAEL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQAYD 183
           +NN  W+    ++D +RE+G   +VN M++ +SV+ RL  E    LSF EF Y +LQ YD
Sbjct: 120 VNNYDWMKEFSFLDFVREVGKHITVNYMMAKDSVKRRLNGEARDGLSFTEFTYQLLQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ L +   C+LQMGGSDQWGNI  G +L  R    ++FALT PL+T A G K GKT SG
Sbjct: 180 FLHLYETKGCKLQMGGSDQWGNITTGAELIRRTNGGEVFALTCPLITKADGGKFGKTESG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKI 301
            IWL+   TSPY F+Q+W N+ D+D   + K  T++   EI+       Q   +   +K 
Sbjct: 240 NIWLDPRYTSPYKFYQFWLNVSDSDAERYIKIFTSIEKEEIEALVAEHQQAPHLRALQKR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDEVS 347
           +A E+T MVH  E+   A  A+   F  +                 + +P   IS+D ++
Sbjct: 300 LAKEVTIMVHSEEDYNAAVDASNILFGNATSESLRKLDEDTLLAVFEGVPQFEISRDALA 359

Query: 348 RGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+  + L V  A    S  E R+ ++   + +N   +      I   D      + +  
Sbjct: 360 EGVKAVDLFVDNAAVFASKGEMRKLVQGGGVSLNKEKLEAFDQVITTADLLDGKYLLVQR 419

Query: 407 GKKNHIIC 414
           GKKN+ + 
Sbjct: 420 GKKNYFLL 427


>gi|257462926|ref|ZP_05627331.1| tyrosyl-tRNA synthetase [Fusobacterium sp. D12]
 gi|317060546|ref|ZP_07925031.1| tyrosyl-tRNA synthetase [Fusobacterium sp. D12]
 gi|313686222|gb|EFS23057.1| tyrosyl-tRNA synthetase [Fusobacterium sp. D12]
          Length = 402

 Score =  489 bits (1260), Expect = e-136,   Method: Composition-based stats.
 Identities = 182/406 (44%), Positives = 245/406 (60%), Gaps = 11/406 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +   +L ERG++ Q ++  E+  L  +  VT YIG+D TA SLH GH   +M +  +QK 
Sbjct: 3   NVFHVLQERGYLKQFTHEEEIRELLEKEKVTFYIGFDPTADSLHVGHFIAMMFMAHMQKY 62

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI+L+GGGT +IGDPS R + R MM  + +Q NI+ IK     FI +  GK  A++ 
Sbjct: 63  GHRPIALVGGGTGMIGDPSGRTDMRTMMTRETVQHNIDCIKKQMEKFIDFSDGK--AILA 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  + YID +R+IGS FSVNRML+ E  +SR+  E  LSFLEFNYM++Q YDF+ 
Sbjct: 121 NNADWLWDLNYIDFIRDIGSHFSVNRMLAAECFKSRM--ENGLSFLEFNYMLMQGYDFLV 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L K YDC LQ+GG DQW N+I G++L  + +    +A+T  LLT   G KMGKT  GA+W
Sbjct: 179 LNKKYDCVLQLGGDDQWSNMIAGVELIRKKEQKSAYAMTCTLLTNKEGKKMGKTAKGALW 238

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           L+ E TSPY F+QYWRN+DDADV      LT LPM E+ R    Q + INEAKK++A EI
Sbjct: 239 LDPEKTSPYEFYQYWRNVDDADVEKCLSLLTFLPMEEVKRFVSFQDERINEAKKVLAFEI 298

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
           T M+HG EEA KA  AA   F            ++ K EV+ G  LL  +V      + +
Sbjct: 299 TKMIHGEEEALKAQKAAEALFSGGTD-----LTTVPKLEVALGEELLNALVDNNVLKTKS 353

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           E RR ++  A+ + N  +S+    I  + F   G+  L  GKK   
Sbjct: 354 EGRRLMQQGAMSLENIKLSDPAYLISEESFH--GDALLKLGKKKFY 397


>gi|300781253|ref|ZP_07091107.1| tyrosine--tRNA ligase [Corynebacterium genitalium ATCC 33030]
 gi|300532960|gb|EFK54021.1| tyrosine--tRNA ligase [Corynebacterium genitalium ATCC 33030]
          Length = 421

 Score =  489 bits (1260), Expect = e-136,   Method: Composition-based stats.
 Identities = 148/424 (34%), Positives = 228/424 (53%), Gaps = 15/424 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           ++ +  L  RG ++Q ++   L    +   +T Y G+D T  SLHAGHL  L++L   Q+
Sbjct: 2   ANIIDELQWRGLVNQSTDLEALKDQTAN-PITLYAGFDPTGPSLHAGHLVPLLMLRRFQE 60

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+PI L GG T +IGDP    E R M  +  +++  ++I G    F+ +  G   A++
Sbjct: 61  AGHRPIVLAGGATGLIGDPREVGE-RSMNTADTVEDWAQRITGQLQRFVSF-EGDNAAVL 118

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  W   +  I  LR+IG  FS++ MLS E+V+ RL+    +S+ EF+YM+LQA DFV
Sbjct: 119 VNNAEWTNDMSVISFLRDIGKHFSLSTMLSRETVKRRLE-GDGISYTEFSYMLLQANDFV 177

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT-LSGA 244
           +L + +DC LQ+GGSDQWGN++ G+DL  R+    + ALT PL+T + G K GK+   G+
Sbjct: 178 QLRRRHDCMLQIGGSDQWGNLVAGVDLNRRVDGASVHALTVPLVTDSEGKKFGKSTGGGS 237

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKII 302
           +WL+ EMTSPY ++QY+ N  DADV+ + +  T L   E+  M     +     EA+K +
Sbjct: 238 LWLDPEMTSPYRWYQYFVNTADADVIRYLRWFTFLTQDELAEMETEVEERPFKREAQKRL 297

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQ--------HMPTISISKDEVSRGMGLLT 354
           A E+T +VHG E  +    A+   F  +  S+         +    + + E      ++ 
Sbjct: 298 AQEMTDLVHGPEATKAVELASQALFGRAELSELDEQTLAAAVSETDVFEVEAGAPRTIVD 357

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           L+V  G   S   ARR +K      NN  I +E  +   +D      + L  GKKN    
Sbjct: 358 LLVGTGLVDSKGAARRAIKEGGAYANNERIESEGWEPAAEDLLHGSWVVLRRGKKNFAGV 417

Query: 415 HLCG 418
            + G
Sbjct: 418 KVHG 421


>gi|188590186|ref|YP_001922290.1| tyrosyl-tRNA synthetase [Clostridium botulinum E3 str. Alaska E43]
 gi|254783583|sp|B2UYM8|SYY_CLOBA RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|188500467|gb|ACD53603.1| tyrosyl-tRNA synthetase [Clostridium botulinum E3 str. Alaska E43]
          Length = 406

 Score =  489 bits (1259), Expect = e-136,   Method: Composition-based stats.
 Identities = 176/411 (42%), Positives = 256/411 (62%), Gaps = 7/411 (1%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           ++ L  L +RG+I Q ++  E   L     VT YIG+D TA SLH GH   +M +  +Q+
Sbjct: 2   ANVLDELLDRGYIKQFTHEEETRKLLENEKVTFYIGFDPTADSLHVGHFIAMMFMAHMQR 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+PI+L+GGGT+++GDPS + + R+M+  ++IQ N++ IK     FI +   K  AL+
Sbjct: 62  AGHRPIALLGGGTAMVGDPSGKTDMRKMLTKEQIQHNVDSIKKQMERFIDFSDDK--ALI 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  WL  + Y+D LRE+G  FSVNRMLS E  + RL  E+ LSFLEFNYM++Q YDF 
Sbjct: 120 VNNADWLLDLNYVDFLREVGVHFSVNRMLSAECFKQRL--EKGLSFLEFNYMLMQGYDFY 177

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L + Y C++++GG DQW N+I G++L  R       A+T  LLT + G KMGKT+ GA+
Sbjct: 178 VLNQKYGCKMELGGDDQWSNMIAGVELVRRKAQGDAMAMTCTLLTNSQGQKMGKTVGGAL 237

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
           WL+ +  SP++F+QYWRN+DDADV      LT LPM E+ R+  L+G EIN AKKI+A E
Sbjct: 238 WLDADKVSPFDFYQYWRNVDDADVEKCLALLTFLPMDEVRRLGALEGAEINGAKKILAFE 297

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           +T +VHG EEA+KA  AA   F       ++PT++I+K+++  G  +L +I K     S 
Sbjct: 298 VTKLVHGEEEAKKAEEAANALFSGGADMSNVPTVTIAKEDL--GSTVLDIIAKTKIVPSK 355

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            E RR ++   + IN   I +    +   DF+  G+  +  GKKN+    +
Sbjct: 356 KEGRRLIEQGGLSINGEKIIDLTRTLNEDDFE-DGSALIKRGKKNYNKIEI 405


>gi|237736065|ref|ZP_04566546.1| tyrosyl-tRNA synthetase [Fusobacterium mortiferum ATCC 9817]
 gi|229421879|gb|EEO36926.1| tyrosyl-tRNA synthetase [Fusobacterium mortiferum ATCC 9817]
          Length = 407

 Score =  489 bits (1259), Expect = e-136,   Method: Composition-based stats.
 Identities = 173/410 (42%), Positives = 250/410 (60%), Gaps = 8/410 (1%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + + +L ERG+I Q ++  E+     +  VT YIG+D TA SLH GH   +M +  +QK 
Sbjct: 5   NVVDVLLERGYIKQFTHEDEIREALGKEKVTFYIGFDPTADSLHVGHFIAMMFMAHMQKF 64

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI+L+GGGT++IGDPS R + R+MM  + I  N+  IK     FI +  GK  A++ 
Sbjct: 65  GHRPIALVGGGTAMIGDPSGRTDMRQMMTKETIAHNVACIKKQMEKFIDFSEGK--AILE 122

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  + Y+D +R+IG+ FSVNRML+ E  + R+  E  LSFLEFNYM++Q YDF+ 
Sbjct: 123 NNADWLLGLNYVDFIRDIGAHFSVNRMLAAECFKQRM--EAGLSFLEFNYMLMQGYDFLV 180

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L K + C +Q+GG DQW N+I G++L  + +  + FA+T  LLT + G KMGKT  GA+W
Sbjct: 181 LNKKHGCTMQLGGDDQWSNMIAGVELIRKKEQKQAFAMTCTLLTNSEGKKMGKTAKGALW 240

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           L+   TSPY F+QYWRN+ DADV      LT LPM E+ R+  L+G EIN+AKKI+A E+
Sbjct: 241 LDAAKTSPYEFYQYWRNVADADVEKCLALLTFLPMDEVRRLGALEGAEINQAKKILAYEV 300

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
           T ++HG EEA KA   A   F     S ++P+I    D++  G  LL L+V+     S  
Sbjct: 301 TKLIHGEEEALKAQQGAEGAFGGGDMS-NVPSIDFPSDKL--GTELLDLLVEHKLIKSKG 357

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           E R+ +  N +   ++ +++  ++I  +D    G   +  GKK      L
Sbjct: 358 EGRKFVTQNGLTAADNKVTDFAMKIT-EDLFKDGEFVVKIGKKKIYRVVL 406


>gi|218131651|ref|ZP_03460455.1| hypothetical protein BACEGG_03272 [Bacteroides eggerthii DSM 20697]
 gi|217985954|gb|EEC52293.1| hypothetical protein BACEGG_03272 [Bacteroides eggerthii DSM 20697]
          Length = 430

 Score =  489 bits (1259), Expect = e-136,   Method: Composition-based stats.
 Identities = 150/428 (35%), Positives = 226/428 (52%), Gaps = 22/428 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG +H +    E   L ++  VTAYIG+D TA SLH GHL  +M+L   Q+ 
Sbjct: 2   NFVEELKWRGMLHDMMPGTE--ELLAKEQVTAYIGFDPTADSLHIGHLCSVMILRHFQRC 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG-TGKTDALM 125
           GHKP++L+GG T +IGDPS +   R ++  + +Q N+  +K   S F+ +       A +
Sbjct: 60  GHKPLALIGGATGMIGDPSGKSAERNLLTEETLQRNMAGMKKQLSKFLDFDSDAPNRAEL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQAYD 183
           +NN  W+    ++D  RE+G   +VN M++ +SV+ RL  E    LSF EF Y +LQ YD
Sbjct: 120 VNNYDWMKGFSFLDFAREVGKHITVNYMMAKDSVKKRLNGEARDGLSFTEFTYQLLQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ L +   C+LQMGGSDQWGNI  G +L  R    ++FALTSPL+T A G K GKT SG
Sbjct: 180 FLHLYETKGCKLQMGGSDQWGNITTGAELIRRTNGGEVFALTSPLITKADGGKFGKTESG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKKI 301
            IWL+   TSPY F+Q+W N+ DAD   + K  T+L   EI+ +         +   +K 
Sbjct: 240 NIWLDPRYTSPYKFYQFWLNVSDADAARYIKIFTSLSKEEIEALTAEHETAPHLRVLQKR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDEVS 347
           +A E+T MVH  E+   A  A+   F  +                 + +P   +S+D ++
Sbjct: 300 LAKEVTIMVHSEEDYNAAVDASNILFGNATSEALKKLDEDTLLAVFEGVPQFEVSRDALT 359

Query: 348 RGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+  + L V  A    S  E R+ ++   + +N   +      +   D      + +  
Sbjct: 360 AGVKAVDLFVDNAAVFASKGEMRKLVQGGGVSLNKEKLVAFDQVVTTADLLDDKYLLVQR 419

Query: 407 GKKNHIIC 414
           GKKN+ + 
Sbjct: 420 GKKNYYLI 427


>gi|253564535|ref|ZP_04841992.1| tyrosyl-tRNA synthetase [Bacteroides sp. 3_2_5]
 gi|251948311|gb|EES88593.1| tyrosyl-tRNA synthetase [Bacteroides sp. 3_2_5]
 gi|301161140|emb|CBW20678.1| putative tyrosyl-tRNA synthetase 1 [Bacteroides fragilis 638R]
          Length = 430

 Score =  489 bits (1259), Expect = e-136,   Method: Composition-based stats.
 Identities = 150/428 (35%), Positives = 224/428 (52%), Gaps = 22/428 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG +H +    E   L ++  VTAY+G D TA SLH GHL  +M+L   Q+ 
Sbjct: 2   NFVEELRWRGMVHDMMPGTE--ELLAKEQVTAYVGIDPTADSLHIGHLCGVMILRHFQRC 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG-TGKTDALM 125
           GHKP++L+GG T +IGDPS +   R ++  + ++ N   IK   + F+ +       A +
Sbjct: 60  GHKPLALIGGATGMIGDPSGKSAERNLLDEETLRHNQACIKKQLAKFLDFESDAPNRAEL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQAYD 183
           +NN  W+    ++D  RE+G   +VN M++ ESV+ RL  E    LSF EF Y +LQ YD
Sbjct: 120 VNNYDWMKEFTFLDFAREVGKHITVNYMMAKESVKKRLNGEARDGLSFTEFTYQLLQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ L +   C+LQMGGSDQWGNI  G +L  R    + +ALT PL+T A G K GKT SG
Sbjct: 180 FLHLYETKGCKLQMGGSDQWGNITTGTELIRRTNGGEAYALTCPLITKADGGKFGKTESG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKI 301
            IWL+   TSPY F+Q+W N+ DAD   + K  T+L  +EID       +   +   +K 
Sbjct: 240 NIWLDPRYTSPYKFYQFWLNVSDADAERYIKIFTSLDKAEIDGLVAEHNEAPHLRVLQKR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDEVS 347
           +A E+T MVH  E+   A  A+   F  +                 + +P   IS+D ++
Sbjct: 300 LAKEVTVMVHSEEDYNAAVDASNILFGNATSDALKKLDEDTLLAVFEGVPQFEISRDALA 359

Query: 348 RGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+  + L V  A    S  E R+ ++   + +N   ++     I   D      + +  
Sbjct: 360 EGVKAVDLFVDNAAVFASKGEMRKLVQGGGVSLNKEKLAAFDQVITTADLLDEKYLLVQR 419

Query: 407 GKKNHIIC 414
           GKKN+ + 
Sbjct: 420 GKKNYYLI 427


>gi|225867704|ref|YP_002743652.1| tyrosyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus]
 gi|259517026|sp|C0MEE0|SYY_STRS7 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|225700980|emb|CAW97715.1| putative tyrosyl-tRNA synthetase [Streptococcus equi subsp.
           zooepidemicus]
          Length = 418

 Score =  489 bits (1259), Expect = e-136,   Method: Composition-based stats.
 Identities = 141/417 (33%), Positives = 222/417 (53%), Gaps = 11/417 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L  RG + Q ++   L    ++G V+ Y GYD TA SLH GHL  ++    LQ  
Sbjct: 2   NIFEELKARGLVFQTTDEEALVKALTEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP +L+GG T +IGDPSF+D  R +   + + +  +KIK   S F+ +  G+  A ++
Sbjct: 62  GHKPYALVGGATGLIGDPSFKDAERILQTKETVLDWSQKIKEQLSCFLDFDNGENKAELV 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I +ID LR++G  F+VN M+S +SV+ R+  E  +S+ EF Y ++Q YDF E
Sbjct: 122 NNYDWFSQISFIDFLRDVGKHFTVNYMMSKDSVKKRI--ETGISYTEFAYQVMQGYDFYE 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L   ++  LQ+GGSDQWGN+  G +L  +        +T PL+T A+G K GK+   AIW
Sbjct: 180 LNAKHNVTLQIGGSDQWGNMTAGTELLRKKADKTGHVMTVPLITDATGKKFGKSEGNAIW 239

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIAT 304
           L+ + TSPY  +Q+W N+ D D V F K  T L + EI  + +      +E  A+K +A 
Sbjct: 240 LDAKKTSPYEMYQFWLNVMDDDAVRFLKIFTFLSLDEIAAIEEQFNAARHERLAQKTLAR 299

Query: 305 EITTMVHGREEAEKAATAAMECFDMSI-------HSQHMPTISISKDEVSRGMGLLTLIV 357
           E+ T+VHG    ++A     + F  +I         Q +  +   + +    + ++ ++V
Sbjct: 300 EVVTLVHGEAAYQQALNITEQLFAGAIKNLSAAELKQGLSNVPNYQVQAEDSLNIVDMLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            AG + S  +AR  L++ AI +N   + N    +   D        +  GKK + + 
Sbjct: 360 TAGISPSKRQAREDLQNGAIYLNGERLQNLDYSLSTADRIDNQLTVIRRGKKKYAVL 416


>gi|332292105|ref|YP_004430714.1| tyrosyl-tRNA synthetase [Krokinobacter diaphorus 4H-3-7-5]
 gi|332170191|gb|AEE19446.1| tyrosyl-tRNA synthetase [Krokinobacter diaphorus 4H-3-7-5]
          Length = 431

 Score =  489 bits (1259), Expect = e-136,   Method: Composition-based stats.
 Identities = 156/430 (36%), Positives = 234/430 (54%), Gaps = 23/430 (5%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
            +F+  L  RG IH +    E      + + +AY+G+D TA SLH G+L  +MLL   Q+
Sbjct: 3   KNFVEELQWRGMIHDVMPQTE--EHLMEAMRSAYVGFDPTADSLHIGNLVPIMLLAHYQR 60

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG-KTDAL 124
           +GH+P++L+GG T +IGDPS +   R ++  + ++ N E +K   S F+ + +G +  AL
Sbjct: 61  SGHRPVALVGGATGMIGDPSGKSSERNLLDEKTLRHNQECVKSQLSQFLDFTSGAENQAL 120

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ--SLSFLEFNYMILQAY 182
           ++NN  W+    ++D +R++G   +VN M++ +SV++RL  E    +SF EF Y ++Q Y
Sbjct: 121 LVNNYDWMKEFSFLDFIRDVGKHITVNYMMAKDSVKNRLTGEDADGMSFTEFTYQMVQGY 180

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DF+ L KN    LQMGGSDQWGNI  G +L  R+   K +ALT PL+T + G+K GK+  
Sbjct: 181 DFLHLYKNEGITLQMGGSDQWGNITTGTELVRRIGGGKGYALTCPLITKSDGSKFGKSEG 240

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKK 300
           G +WLN + TSPY F+QYW N  D D   + K  T L   EI+    A  +       +K
Sbjct: 241 GNVWLNAKRTSPYKFYQYWLNTTDEDAEKYIKIFTFLDREEIEALVAAHKEAPHQRALQK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDEV 346
            +A E+TT VH  E  EKA  A+   F  S                 + +P   I K E+
Sbjct: 301 RLAEEVTTTVHDAEALEKAIAASNILFGKSTSDDLKSLDEATFLDVFEGVPQAEIEKSEI 360

Query: 347 SRGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLS 405
             G+ ++  + +  GF  S  EARR LK N+I IN   +  E   I+  D  +   + L 
Sbjct: 361 EAGLDIIAALAEKTGFLKSNGEARRALKENSISINKEKV-GEDYTIQTTDLINGTFVLLQ 419

Query: 406 FGKKNHIICH 415
            GKKN+ +  
Sbjct: 420 RGKKNYFVIR 429


>gi|126651336|ref|ZP_01723543.1| tyrosyl-tRNA synthetase [Bacillus sp. B14905]
 gi|126591865|gb|EAZ85948.1| tyrosyl-tRNA synthetase [Bacillus sp. B14905]
          Length = 422

 Score =  489 bits (1259), Expect = e-136,   Method: Composition-based stats.
 Identities = 141/426 (33%), Positives = 237/426 (55%), Gaps = 20/426 (4%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           ++ L  L  RG ++Q ++   +  L  +  V+ Y G D TA S+H GH+  L+ L   QK
Sbjct: 3   NELLQDLEWRGLLYQQTDADGMAKLLEEQSVSLYCGVDPTADSMHIGHIVPLLTLRRFQK 62

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+PI L+GG T +IGDPS R E R++   ++I +N++ I+G       +      A +
Sbjct: 63  AGHRPILLVGGATGMIGDPSGRSEERQLQTVEQIDKNVQGIRGQLERIFDFAEAGNGAQL 122

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  W+ +I  I+ LR+ G   +VN ML+ +++ SRL  +  +SF EF Y ++Q  D+ 
Sbjct: 123 VNNRDWIGNINTIEFLRDYGKLINVNYMLAKDTIASRL--DTGISFTEFAYTLIQGIDYN 180

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSG 243
            L  +Y+CR+Q+GGSDQWGNI  G+++  +      K F +T PL+T A GTK GKT  G
Sbjct: 181 HLYNHYNCRIQVGGSDQWGNITTGLEVIRKTHEEETKAFGITIPLVTKADGTKFGKTAGG 240

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA--KLQGKEINEAKKI 301
           A+WL+ + TSPY F+Q+W N  DADV+ + K  T L   EI+ +A    +   + +A+K 
Sbjct: 241 AVWLDGKKTSPYEFYQFWINAADADVIKYLKIFTFLTREEIEALAVSVEEEPHLRKAQKA 300

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMG 351
           +A E+T ++HG+E  E+A       F   + +          + +P+I ++K++      
Sbjct: 301 LAEEMTRLIHGQEALEQAIRITAALFSGDLKALSAEEMKDAFKDVPSIEMAKED----KN 356

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           ++ L+V+AG ++S  +AR  + + AI +N   +++ +     +D        +  GKK +
Sbjct: 357 IVDLLVEAGISSSKRQAREDVSNGAISVNGEKVTDLEYVFGAKDRLEDAFSIVRRGKKKY 416

Query: 412 IICHLC 417
            +    
Sbjct: 417 HMVKFV 422


>gi|47567310|ref|ZP_00238023.1| tyrosyl-tRNA synthetase [Bacillus cereus G9241]
 gi|47555931|gb|EAL14269.1| tyrosyl-tRNA synthetase [Bacillus cereus G9241]
          Length = 420

 Score =  489 bits (1259), Expect = e-136,   Method: Composition-based stats.
 Identities = 148/424 (34%), Positives = 220/424 (51%), Gaps = 21/424 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG ++Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  
Sbjct: 2   NIIDELEWRGAVNQQTDEEGLRKLVEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P+ L+GG T  IGDPS R   R++   + +Q N++ +         +G G ++  M+
Sbjct: 62  GHHPVILIGGATGTIGDPSGRQSERQLQTLEVVQHNVDALTAQMKKLFDFG-GNSEVKMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I  I+ LR+ G  FS+N ML+ + V SRL  +  +SF EF Y ILQA DF  
Sbjct: 121 NNYDWTHEINIIEFLRDYGKNFSINSMLAKDIVASRL--DTGISFTEFTYQILQAMDFHH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKLFALTSPLLTTASGTKMGKTLSGA 244
           L    D +LQ+GGSDQWGNI  G+DL  +L+    K+F LT PLL  + GTK GK+  GA
Sbjct: 179 LYTKEDVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSAGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA--KLQGKEINEAKKII 302
           +WL+ E T+P+ F+Q+W N DD DVV + K  T L    ID +A          EA+K++
Sbjct: 239 VWLDPEKTTPFEFYQFWVNTDDRDVVKYLKYFTFLMKERIDELAVKVETEPHKREAQKVL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGL 352
           A E+T  VHG E   +A       F   I S          + MPT   SK+       +
Sbjct: 299 AEEMTKFVHGEEAFLQAVKITAALFSGDIKSLTADEIEQGFKEMPTFQSSKET----KNI 354

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           +  +V  G   S  +AR  + + AI +N   +++    + +++      I +  GKKN+ 
Sbjct: 355 VEWLVDLGIEPSRRQAREDINNGAISMNGEKVTDVGTDVTVENSFDGRFIIIRKGKKNYS 414

Query: 413 ICHL 416
           +  L
Sbjct: 415 LVKL 418


>gi|261378444|ref|ZP_05983017.1| tyrosine--tRNA ligase [Neisseria cinerea ATCC 14685]
 gi|269145228|gb|EEZ71646.1| tyrosine--tRNA ligase [Neisseria cinerea ATCC 14685]
          Length = 432

 Score =  489 bits (1259), Expect = e-136,   Method: Composition-based stats.
 Identities = 155/429 (36%), Positives = 233/429 (54%), Gaps = 21/429 (4%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +  +  L  RG I Q ++   LD L ++  +  Y G+D TA SLH GHL  ++ L   Q+
Sbjct: 2   TSIIQDLKSRGLIAQTTDIEALDALLNEQKIALYCGFDPTADSLHIGHLLPVLALRRFQQ 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH PI+L+GG T +IGDPSF+   R +  ++ +   +E I+   + F+ +  G+  A+M
Sbjct: 62  AGHTPIALVGGATGMIGDPSFKAVERSLNSAETVAGWVESIRNQLTPFLSF-EGENAAIM 120

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYDF 184
            NN  W  S+  +D LR+IG  FSVN ML+ ESV+ R++R+   +SF EF Y +LQ YDF
Sbjct: 121 ANNADWFGSMNCLDFLRDIGKHFSVNAMLNKESVKQRIERDDVGISFTEFAYSLLQGYDF 180

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
            EL K +   L++GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  GA
Sbjct: 181 AELNKRHGAVLEIGGSDQWGNITAGIDLTRRLHQKQVFGLTLPLVTKSDGTKFGKTEGGA 240

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINEAKKII 302
           +WLN + TSPY F+Q+W  + DADV  F K  T L + EID +           EA++I+
Sbjct: 241 VWLNAKKTSPYQFYQFWLKVADADVYKFLKYFTFLSIEEIDAIEAKDQASGTKPEAQRIL 300

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTLI 356
           A E+T ++HG    + A   +   F     +      + +    +   EVS G+ ++ ++
Sbjct: 301 AEEMTRLIHGEAALQAAQRISESLFAEDQSNLTESDFEQLALDGLPAFEVSDGINVVEVL 360

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIIS-----------NEKLQIKLQDFDSTGNIKLS 405
           VK G A+S  EAR  + S A+ +N                ++   +  +         + 
Sbjct: 361 VKTGLASSNKEARGFVNSKAVLLNGKPAETNNPNHAAERPDDACLLTDEHKRFGKYTIVR 420

Query: 406 FGKKNHIIC 414
            GK+NH + 
Sbjct: 421 RGKRNHALL 429


>gi|295839656|ref|ZP_06826589.1| tyrosine-tRNA ligase [Streptomyces sp. SPB74]
 gi|197698497|gb|EDY45430.1| tyrosine-tRNA ligase [Streptomyces sp. SPB74]
          Length = 422

 Score =  489 bits (1259), Expect = e-136,   Method: Composition-based stats.
 Identities = 142/422 (33%), Positives = 229/422 (54%), Gaps = 11/422 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +D +  L  RG   Q ++   L    + G VT Y G+D TA+SLH GHL Q++ +  LQ+
Sbjct: 2   TDIVDDLKWRGLFAQSTDEEALRKALANGPVTFYCGFDPTAASLHVGHLVQVLTVRRLQQ 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+P++L+GG T  IGDP      R +     I + +++++     F+ +  G + A M
Sbjct: 62  AGHRPLALVGGATGQIGDPRP-TAERTLNDPATIAQWVDRLRAQIEPFLDF-EGPSAARM 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  W   +  I  LR++G  F VN+ML+ ESV  RL+ EQ +S+ EF+Y +LQA DF+
Sbjct: 120 VNNLDWTSGLSAIAFLRDVGKHFRVNKMLTKESVARRLESEQGISYTEFSYQLLQAMDFL 179

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASGTKMGKTLSGA 244
           EL + + C LQ GGSDQWGN+  G+DL  R++    + AL +PL+T A GTK GKT  GA
Sbjct: 180 ELYRRHGCVLQQGGSDQWGNLTAGVDLIHRVEPDAVVHALATPLMTKADGTKFGKTEGGA 239

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKII 302
           +WL+  MT+PY F+Q+W N+DD D+  + + L+    +E++++  +  +      A++ +
Sbjct: 240 VWLDPSMTTPYAFYQFWLNVDDRDISRYTRILSFRSRAELEKLEAVTAERPQARAAQRAL 299

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQ------HMPTISISKDEVSRGMGLLTLI 356
           A E+TT+VHG  +      A+   F     +             + +  V+  + ++ L+
Sbjct: 300 AEELTTLVHGEAQTRAVVAASRALFGQGELAGLDGATLAAALGELPRAVVAEPVSVVDLL 359

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V+ G   S + ARR +K     +NN  ++ E       +      + L  GKKN     +
Sbjct: 360 VETGLVASKSAARRTIKEGGAYVNNVKVAGEDAVPAADELLHGRWLVLRRGKKNLAAVEI 419

Query: 417 CG 418
            G
Sbjct: 420 TG 421


>gi|262184147|ref|ZP_06043568.1| tyrosyl-tRNA synthetase [Corynebacterium aurimucosum ATCC 700975]
          Length = 419

 Score =  488 bits (1258), Expect = e-136,   Method: Composition-based stats.
 Identities = 148/421 (35%), Positives = 225/421 (53%), Gaps = 15/421 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG I+Q ++   L   C +  +T Y G+D T  SLHAGHL  +++L   QK 
Sbjct: 2   NIIDELQWRGLINQSTDLDALREAC-EEPITLYCGFDPTGDSLHAGHLVPMIMLRRFQKA 60

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH PI+L GG T  IGDP    E R M+  + I +N+  IK     FI +  G+  A M+
Sbjct: 61  GHHPIALAGGATGQIGDPRDVGE-RTMLSQETINDNMVAIKKQLRQFIDFA-GENAATMV 118

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   +  ID LR++G  FS+N ML  ++V+ RL+ +  +S+ EF+YM+LQ+ D+V 
Sbjct: 119 NNADWTSKMTVIDFLRDVGKNFSLNTMLDRDTVKRRLESD-GISYTEFSYMLLQSNDYVH 177

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA-I 245
           L   +DC LQ+GG DQWGNI+ G+DL  R+K  K+  LT PL+T A G K GK+  G  +
Sbjct: 178 LHDEFDCILQIGGGDQWGNIVSGVDLNRRVKGAKVHGLTVPLVTDAQGQKFGKSTGGGKL 237

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIA 303
           WL+ E TSPY+++QY+ N  D+ V+ + +  T L   EI    +   +E    EA++ +A
Sbjct: 238 WLDPEKTSPYSWYQYFLNAGDSVVIDYLRWFTFLSQEEIAEYEQKVAEEPFRREAQRRLA 297

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQ--------HMPTISISKDEVSRGMGLLTL 355
            E+T +VHG E  +    A    F  +  +          +   +++         ++ L
Sbjct: 298 QEMTNLVHGEEATKSVKLATQALFGKAELADLDEQTLVGALSETTVADIAAGEPRTIVDL 357

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +V  G A S   ARR +K     +NN  I +++ +   +D      + L  GKKN     
Sbjct: 358 LVACGLADSKGAARRTIKEGGAYVNNQRIESDEWEPAAEDLLHGAWLVLRRGKKNFAGAK 417

Query: 416 L 416
           L
Sbjct: 418 L 418


>gi|294668559|ref|ZP_06733656.1| tyrosine--tRNA ligase [Neisseria elongata subsp. glycolytica ATCC
           29315]
 gi|291309522|gb|EFE50765.1| tyrosine--tRNA ligase [Neisseria elongata subsp. glycolytica ATCC
           29315]
          Length = 432

 Score =  488 bits (1258), Expect = e-136,   Method: Composition-based stats.
 Identities = 156/429 (36%), Positives = 229/429 (53%), Gaps = 21/429 (4%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
              +  L  RG I Q ++   LD L ++  +  Y G+D TA SLH GHL  ++ L   Q+
Sbjct: 2   KSVIQDLQSRGLIAQTTDIEALDALLNEQKIALYCGFDPTADSLHIGHLLPVLALRRFQQ 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH PI+L+GG T +IGDPSF+   R +  ++ +   +E I+     F+ +  G+  A+M
Sbjct: 62  AGHTPIALVGGATGMIGDPSFKAVERSLNSAETVAGWVESIRNQLKPFLSF-EGENAAIM 120

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYDF 184
            NN  W  S+  +D LR+IG  FSVN ML+ ESV+ R++R+   +SF EF Y +LQ YDF
Sbjct: 121 ANNADWFGSMNCLDFLRDIGKHFSVNAMLNKESVKQRIERDDVGISFTEFAYSLLQGYDF 180

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
            EL K +   L++GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  GA
Sbjct: 181 AELNKRHGAVLEIGGSDQWGNITAGIDLTRRLNQKQVFGLTLPLVTKSDGTKFGKTEGGA 240

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINEAKKII 302
           +WLN + TSPY F+Q+W  + DADV  F K  T L + EID +           EA++I+
Sbjct: 241 VWLNAKKTSPYQFYQFWLKVADADVYKFLKYFTFLSIEEIDAIEAKDQASGTKPEAQRIL 300

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTLI 356
           A E+T ++HG    + A   +   F     S      + +    +   EVS G+ ++  +
Sbjct: 301 AEEMTRLIHGEAALQAAQRISESLFAEDQSSLTEGDFEQLALDGLPAFEVSDGLNVVEAL 360

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIIS-----------NEKLQIKLQDFDSTGNIKLS 405
           VK G A+S  EAR  + S A+ +N                ++   +            + 
Sbjct: 361 VKTGLASSNKEARGFVNSKAVLLNGQAAESNNPNHAAERPDDAYLLTDAHKRFGKYTIVR 420

Query: 406 FGKKNHIIC 414
            GK+NH + 
Sbjct: 421 RGKRNHALL 429


>gi|15674319|ref|NP_268493.1| tyrosyl-tRNA synthetase [Streptococcus pyogenes M1 GAS]
 gi|71909895|ref|YP_281445.1| tyrosyl-tRNA synthetase [Streptococcus pyogenes MGAS5005]
 gi|94993484|ref|YP_601582.1| tyrosyl-tRNA synthetase [Streptococcus pyogenes MGAS10750]
 gi|81534089|sp|Q9A1U3|SYY_STRP1 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|123080153|sp|Q1J8X3|SYY_STRPF RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|13621401|gb|AAK33214.1| putative tyrosine-tRNA ligase [Streptococcus pyogenes M1 GAS]
 gi|71852677|gb|AAZ50700.1| tyrosyl-tRNA synthetase [Streptococcus pyogenes MGAS5005]
 gi|94546992|gb|ABF37038.1| Tyrosyl-tRNA synthetase [Streptococcus pyogenes MGAS10750]
          Length = 418

 Score =  488 bits (1258), Expect = e-136,   Method: Composition-based stats.
 Identities = 144/424 (33%), Positives = 228/424 (53%), Gaps = 25/424 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L  RG + Q ++ + L    ++G V+ Y GYD TA SLH GHL  ++    LQ  
Sbjct: 2   NIFEELKARGLVFQTTDEQALVKALTEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP +L+GG T +IGDPSF+D  R +   + + E  +KIKG  S+F+ +  G   A ++
Sbjct: 62  GHKPYALVGGATGLIGDPSFKDAERSLQTKETVLEWSDKIKGQLSTFLDFENGDNKAELV 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I +ID LR++G +F+VN M+S +SV+ R+  E  +S+ EF Y I+Q YDF E
Sbjct: 122 NNYDWFSQISFIDFLRDVGKYFTVNYMMSKDSVKKRI--ETGISYTEFAYQIMQGYDFYE 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L   ++  LQ+GGSDQWGN+  G +L  +        +T PL+T ++G K GK+   A+W
Sbjct: 180 LNDKHNVTLQIGGSDQWGNMTAGTELLRKKADKTGHVMTVPLITDSTGKKFGKSEGNAVW 239

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIAT 304
           L+ + TSPY  +Q+W N+ D D V F K  T L + EI  +        +E  A+K +A 
Sbjct: 240 LDADKTSPYEMYQFWLNVMDDDAVRFLKIFTFLSLDEIAEIETQFNAARHERLAQKTLAR 299

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGM-------------- 350
           E+ T+VHG E  ++A     + F  +I +       +S +E+ +G+              
Sbjct: 300 EVVTLVHGEEAYKQALNITEQLFAGNIKN-------LSANELKQGLSNVPNYHVQSIDNH 352

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            ++ ++V A  + S  +AR  +++ AI IN   + +   Q+   D        +  GKK 
Sbjct: 353 NIVEILVAAKISPSKRQAREDVQNGAIYINGDRVQDLDYQLSNDDKIDDQLTVIRRGKKK 412

Query: 411 HIIC 414
           + + 
Sbjct: 413 YAVL 416


>gi|329956463|ref|ZP_08297060.1| tyrosine--tRNA ligase [Bacteroides clarus YIT 12056]
 gi|328524360|gb|EGF51430.1| tyrosine--tRNA ligase [Bacteroides clarus YIT 12056]
          Length = 430

 Score =  488 bits (1258), Expect = e-136,   Method: Composition-based stats.
 Identities = 150/428 (35%), Positives = 227/428 (53%), Gaps = 22/428 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG +H +    E   L ++  VTAYIG+D TA SLH GHL  +M+L   Q+ 
Sbjct: 2   NFVEELKWRGMLHDMMPGTE--ELLAKEQVTAYIGFDPTADSLHIGHLCSVMILRHFQRC 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG-TGKTDALM 125
           GHKP++L+GG T +IGDPS +   R ++  + +Q N+  +K   S F+ +       A +
Sbjct: 60  GHKPLALIGGATGMIGDPSGKSAERNLLTEETLQRNMAGMKKQLSKFLDFESDAPNRAEL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQAYD 183
           +NN  W+    ++D  RE+G   +VN M++ +SV+ RL  E    LSF EF Y +LQ YD
Sbjct: 120 VNNYDWMKDFSFLDFAREVGKHITVNYMMAKDSVKKRLNGEARDGLSFTEFTYQLLQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ L +   C+LQMGGSDQWGNI  G +L  R    ++FALTSPL+T A G K GKT SG
Sbjct: 180 FLHLYETKGCKLQMGGSDQWGNITTGAELIRRTNGGEVFALTSPLITKADGGKFGKTESG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKKI 301
            IWL+   TSPY F+Q+W N+ DAD   + K  T+L   EI+ +         +   +K 
Sbjct: 240 NIWLDPRYTSPYKFYQFWLNVSDADAARYIKIFTSLTKEEIEALTAEHEAAPHLRVLQKR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDEVS 347
           +A E+T MVH  E+   A  A+   F  +                 + +P   +S+D ++
Sbjct: 300 LAKEVTIMVHSEEDYNAAVDASNILFGNATSEALKKLDEDTLLAVFEGVPQFEVSRDALA 359

Query: 348 RGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+  + L V  A    S  E R+ ++   + +N   ++     +   D      + +  
Sbjct: 360 AGVKAVDLFVDNAAVFASKGEMRKLVQGGGVSLNKEKLAAFDQVVTTADLLDDKYLLVQR 419

Query: 407 GKKNHIIC 414
           GKKN+ + 
Sbjct: 420 GKKNYYLI 427


>gi|228474511|ref|ZP_04059244.1| tyrosine--tRNA ligase [Staphylococcus hominis SK119]
 gi|228271540|gb|EEK12902.1| tyrosine--tRNA ligase [Staphylococcus hominis SK119]
          Length = 420

 Score =  488 bits (1258), Expect = e-136,   Method: Composition-based stats.
 Identities = 146/421 (34%), Positives = 229/421 (54%), Gaps = 20/421 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L  RG I+Q ++ + ++ L ++  VT Y G D TA SLH GHL   M L   Q+ G
Sbjct: 5   LLEELQWRGLIYQQTDEQGIEDLLNKEQVTLYCGADPTADSLHIGHLLPFMTLRRFQEHG 64

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+PI L+GGGT +IGDPS + E R +    ++ +N+E +        ++GT K  A+++N
Sbjct: 65  HRPIVLIGGGTGMIGDPSGKSEERVLQTEDQVAKNVEGLSAQMHKLFEFGTDKG-AVLVN 123

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  I  I  LR+ G    VN ML  +S++SRL  E  +S+ EF Y ILQA DF  L
Sbjct: 124 NRDWLSQISLISFLRDHGKHVGVNYMLGKDSIQSRL--ENGISYTEFTYTILQAIDFGHL 181

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLG-ERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
            +  +C++Q+GGSDQWGNI  GI+L        + + LT PL+T + G K GK+ SGA+W
Sbjct: 182 NRELNCKIQVGGSDQWGNITSGIELMRRMYGQTEAYGLTIPLVTKSDGKKFGKSESGAVW 241

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIAT 304
           L+ E T+PY F+Q+W N  D DV+ F K  T L   +I+R+ +   +   + EA+K +A 
Sbjct: 242 LDAEKTTPYEFYQFWINQSDEDVIKFLKYFTFLSKEDINRLEQSRDEAPHLREAQKALAE 301

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLT 354
            +T  +HG+E  + A   +   F   + S          + +P + +SK        ++ 
Sbjct: 302 NVTEFIHGKEALDDAIRISEALFKGDLKSLSIKDIKAGFKEVPQVEVSKAT----TNIID 357

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +++++G A+S  +AR  + + AI IN     +    +  +D        +  GKK + + 
Sbjct: 358 VLIESGIASSKRQAREDVNNGAIYINGEREQSVDYNLTDEDKFDNEFTIIRRGKKKYFMV 417

Query: 415 H 415
           +
Sbjct: 418 N 418


>gi|185535515|gb|ACC77865.1| tyrosyl-tRNA synthetase [Staphylococcus xylosus]
          Length = 420

 Score =  488 bits (1258), Expect = e-136,   Method: Composition-based stats.
 Identities = 142/421 (33%), Positives = 227/421 (53%), Gaps = 20/421 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L  RG ++Q ++   ++ + ++  VT Y G D TA SLH GHL   + L   Q+ G
Sbjct: 5   LLEDLKWRGLVYQQTDESGIEEILNKEQVTLYCGADPTADSLHIGHLLPFLTLRRFQEHG 64

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+P+ L+GGGT +IGDPS + E R++    +++ N++ I        ++GT K  A ++N
Sbjct: 65  HRPLVLIGGGTGMIGDPSGKSEERKLQTEDQVEVNVQGISNQMHKIFEFGTEKG-AKLVN 123

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N+ WL  I  ID LR+ G    VN ML+ +S+++RL  E  +SF EF Y ILQA DF  L
Sbjct: 124 NKDWLGQISLIDFLRDYGKHVGVNYMLAKDSIQTRL--EHGISFTEFTYTILQAIDFGHL 181

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLG-ERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
            K ++C++Q+GGSDQWGNI  GI+L        + + LT PL+  + G K GKT  GA+W
Sbjct: 182 NKTFNCKIQVGGSDQWGNITSGIELMRRMYGQTEAYGLTIPLVVKSDGKKFGKTEGGAVW 241

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIAT 304
           L+   TSPY F+Q+W N  D DV+ F K  T L   EI+ + K   +   + EA+K +A 
Sbjct: 242 LDASKTSPYEFYQFWINTTDDDVIKFLKYFTFLEKEEIEALEKSLNEAPHLREAQKALAE 301

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLT 354
            +T  +HG+   + A   +   F   + S          + +P + ++ +       ++ 
Sbjct: 302 NVTRFIHGQAALDDAIRISKALFAGDLQSLSAMELKEGFKDVPQVELNHET----TNIVE 357

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            IV++G ++S  +AR  + + AI IN     +   ++  +D        +  GKK + + 
Sbjct: 358 AIVESGISSSKRQAREDVNNGAIYINGVRQQDVNYELTNEDKIEDEFTIIRRGKKKYFMV 417

Query: 415 H 415
           +
Sbjct: 418 N 418


>gi|60679675|ref|YP_209819.1| putative tyrosyl-tRNA synthetase 1 [Bacteroides fragilis NCTC 9343]
 gi|81317251|sp|Q5LJ19|SYY_BACFN RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|60491109|emb|CAH05857.1| putative tyrosyl-tRNA synthetase 1 [Bacteroides fragilis NCTC 9343]
          Length = 430

 Score =  488 bits (1258), Expect = e-136,   Method: Composition-based stats.
 Identities = 150/428 (35%), Positives = 224/428 (52%), Gaps = 22/428 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG +H +    E   L ++  VTAY+G D TA SLH GHL  +M+L   Q+ 
Sbjct: 2   NFVEELRWRGMVHDMMPGTE--ELLAKEQVTAYVGIDPTADSLHIGHLCGVMILRHFQRC 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG-TGKTDALM 125
           GHKP++L+GG T +IGDPS +   R ++  + ++ N   IK   + F+ +       A +
Sbjct: 60  GHKPLALIGGATGMIGDPSGKSAERNLLDEETLRHNQACIKKQLAKFLDFESDAPNRAEL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQAYD 183
           +NN  W+    ++D  RE+G   +VN M++ ESV+ RL  E    LSF EF Y +LQ YD
Sbjct: 120 VNNYDWMKEFTFLDFAREVGKHITVNYMMAKESVKKRLNGEARDGLSFTEFTYQLLQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ L +   C+LQMGGSDQWGNI  G +L  R    + +ALT PL+T A G K GKT SG
Sbjct: 180 FLHLYETKGCKLQMGGSDQWGNITTGTELIRRTNGGEAYALTCPLITKADGGKFGKTESG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKI 301
            IWL+   TSPY F+Q+W N+ DAD   + K  T+L  +EID +         +   +K 
Sbjct: 240 NIWLDPRYTSPYKFYQFWLNVSDADAERYIKIFTSLDKAEIDGLIAEHNEAPHLRVLQKR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDEVS 347
           +A E+T MVH  E+   A  A+   F  +                 + +P   IS+D ++
Sbjct: 300 LAKEVTVMVHSEEDYNAAVDASNILFGNATSDALKKLDEDTLLAVFEGVPQFEISRDALA 359

Query: 348 RGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+  + L V  A    S  E R+ ++   + +N   ++     I   D      + +  
Sbjct: 360 EGVKAVDLFVDNAAVFASKGEMRKLVQGGGVSLNKEKLAAFDQVITTADLLDEKYLLVQR 419

Query: 407 GKKNHIIC 414
           GKKN+ + 
Sbjct: 420 GKKNYYLI 427


>gi|270295162|ref|ZP_06201363.1| tyrosyl-tRNA synthetase [Bacteroides sp. D20]
 gi|270274409|gb|EFA20270.1| tyrosyl-tRNA synthetase [Bacteroides sp. D20]
          Length = 430

 Score =  488 bits (1258), Expect = e-136,   Method: Composition-based stats.
 Identities = 152/428 (35%), Positives = 226/428 (52%), Gaps = 22/428 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG +H +    E   L ++  VTAYIG+D TA SLH GHL  +M+L   Q+ 
Sbjct: 2   NFVEELRWRGMLHDMMPGTE--ELLAKEQVTAYIGFDPTADSLHIGHLCSVMILRHFQRC 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG-TGKTDALM 125
           GHKP++L+GG T +IGDPS +   R ++  + +Q N+  +K   S F+ +       A +
Sbjct: 60  GHKPLALIGGATGMIGDPSGKSAERNLLTEETLQRNLAGMKAQLSKFLDFDSDAPNRAEL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQAYD 183
           +NN  W+ +  ++D  RE+G   +VN M++ +SV+ RL  E    LSF EF Y +LQ YD
Sbjct: 120 VNNYDWMKNFTFLDFAREVGKHITVNYMMAKDSVKKRLNGEARDGLSFTEFTYQLLQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ L +   C+LQMGGSDQWGNI  G +L  R    ++FALTSPL+T A G K GKT SG
Sbjct: 180 FLHLYETKGCKLQMGGSDQWGNITTGAELIRRTNGGEVFALTSPLITKADGGKFGKTESG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKKI 301
            IWL+   TSPY F+Q+W N+ D D   + K  T L   EID +         +   +K 
Sbjct: 240 NIWLDPRYTSPYKFYQFWLNVSDEDAKRYIKIFTALSKEEIDALTAEHEAAPHLRVLQKC 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDEVS 347
           +A E+T MVH  E+   A  A+   F  +                 + +P   IS+D ++
Sbjct: 300 LAKEVTIMVHSEEDYNAAVDASNILFGNATSDALKKLDENTLLAVFEGVPQFEISRDALA 359

Query: 348 RGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+  + L V  A    S  E R+ ++   + +N   ++     I   D      + +  
Sbjct: 360 AGVKAVDLFVDNAAVFASKGEMRKLVQGGGVSLNKEKLAAFDQVITTADLLDEKYLLVQR 419

Query: 407 GKKNHIIC 414
           GKKN+ + 
Sbjct: 420 GKKNYYLI 427


>gi|310816533|ref|YP_003964497.1| tyrosyl-tRNA synthetase [Ketogulonicigenium vulgare Y25]
 gi|308755268|gb|ADO43197.1| tyrosyl-tRNA synthetase [Ketogulonicigenium vulgare Y25]
          Length = 416

 Score =  488 bits (1258), Expect = e-136,   Method: Composition-based stats.
 Identities = 208/415 (50%), Positives = 277/415 (66%), Gaps = 2/415 (0%)

Query: 3   AFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
             KS+FL+++ ERG+I   +N + LD      VV AYIGYD TA+SLH GHL  +M+L W
Sbjct: 4   TPKSEFLAVMIERGYIADCTNYQALDAALMSQVVPAYIGYDATAASLHVGHLLNIMMLRW 63

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD 122
           LQKTGH+PI+LMGGGT+ +GDPSFR + R ++   +I ENI  ++ +F+ F++Y      
Sbjct: 64  LQKTGHQPITLMGGGTTKVGDPSFRSDERPLLTPAKIDENIAGMQQVFARFLRYDDSANG 123

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
           A MLNN  WL S+ Y++ LR+IG  FSVNRMLSFESV+SRL REQSLSFLEFNYMILQAY
Sbjct: 124 AKMLNNAEWLDSLNYLEFLRDIGRHFSVNRMLSFESVKSRLDREQSLSFLEFNYMILQAY 183

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DF+EL + Y   LQMGGSDQWGNI+ GIDL  R+   +++ LTSPLLTT+ G KMGK+ +
Sbjct: 184 DFLELNRRYGTLLQMGGSDQWGNIVNGIDLTRRVIDKEIYGLTSPLLTTSDGKKMGKSAN 243

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKII 302
           GAIWL  +M SPY FWQ+WRN  DADV  F K  T LP++E DR+  L G EIN AK I+
Sbjct: 244 GAIWLRGDMLSPYEFWQFWRNSTDADVARFLKLYTELPVAECDRLGNLGGSEINAAKIIL 303

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFA 362
           A E+TT++HG E A  A   A E F+       +P +++S DEV  G+ L  L+V++G A
Sbjct: 304 ANEVTTLLHGAEAAAAAEATAREVFENGGVGDDLPQLALSVDEVGDGISLAQLVVRSGLA 363

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            +  + +R +    +K+N+    +        D +    +KLS GKK H +  + 
Sbjct: 364 KTGKDGKRLIAEGGLKVNDETTVDAGRLFTAADLEVP--VKLSAGKKRHALVSIS 416


>gi|332184979|ref|ZP_08386728.1| tyrosyl-tRNA synthetase [Sphingomonas sp. S17]
 gi|332014703|gb|EGI56759.1| tyrosyl-tRNA synthetase [Sphingomonas sp. S17]
          Length = 408

 Score =  488 bits (1258), Expect = e-136,   Method: Composition-based stats.
 Identities = 203/416 (48%), Positives = 282/416 (67%), Gaps = 9/416 (2%)

Query: 3   AFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
            ++SD L  L++RG++HQ+++   LD L S  VV  YIG+D TA SLH G L Q+MLL  
Sbjct: 2   TYQSDLLRTLNDRGYVHQMTDAAALDRLASTQVVPGYIGFDPTAPSLHVGSLVQIMLLRR 61

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD 122
           +Q+TGHKPI LMGGGT  IGDPSF+DE+R+++    I+ N+  I+ IF  F+ +G G TD
Sbjct: 62  MQQTGHKPIVLMGGGTGKIGDPSFKDEARKLLAEDGIKANVASIQRIFERFLTFGDGPTD 121

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
           A+M++N  WL  ++YI  LRE+G  FSVNRMLSF+SV+ RL REQSLSFLEFNYMILQAY
Sbjct: 122 AVMVDNADWLDKLEYIPFLREVGQHFSVNRMLSFDSVKLRLDREQSLSFLEFNYMILQAY 181

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DF ELA+ + CRLQMGGSDQWGNI+ GI+L  R+   ++F +T+PL+TTA G KMGKT++
Sbjct: 182 DFRELAQRHGCRLQMGGSDQWGNIVNGIELARRMDGTEVFGVTTPLITTADGGKMGKTMA 241

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKII 302
           GA+WL+++    +++WQ+WRN DD DV  F +  T LP+ EI+R+ KL+G EINEAKKI+
Sbjct: 242 GAVWLHEDQLPHFDYWQFWRNTDDRDVGRFLRLFTDLPLDEIERLEKLEGAEINEAKKIL 301

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFA 362
           A E T M  GR  AE+AA  A   F+       +P+ +++       + ++  ++  GFA
Sbjct: 302 ANEATAMCRGRAAAEEAAETARRTFEEGAAGAALPSFAVA----GGSITIVDALIGLGFA 357

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLCG 418
            S  EARR +     +I+   I++E   I +        +KLS GKK+H +  + G
Sbjct: 358 KSKGEARRLIAGGGARIDGEKIADENAVIAV----GGQPVKLSSGKKHHGLL-VAG 408


>gi|325141639|gb|EGC64101.1| tyrosyl-tRNA synthetase [Neisseria meningitidis 961-5945]
          Length = 431

 Score =  488 bits (1257), Expect = e-136,   Method: Composition-based stats.
 Identities = 157/427 (36%), Positives = 228/427 (53%), Gaps = 21/427 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            +  L  RG I Q ++   LD L ++  ++ Y G+D TA SLH GHL  ++ L   Q+ G
Sbjct: 3   VIQDLQSRGLIAQTTDIEALDALLNEQKISLYCGFDPTADSLHIGHLLPVLALRRFQQAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H PI+L+GG T +IGDPSF+   R +  ++ +   +E I+   + F+ +  G   A+M N
Sbjct: 63  HTPIALVGGATGMIGDPSFKAAERSLNSAETVAGWVESIRSQLTPFLSF-EGGNAAIMAN 121

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDFVE 186
           N  W   +  +D LR+IG  FSVN ML+ ESV+ R+ R    +SF EF Y +LQ YDF E
Sbjct: 122 NADWFGKMNCLDFLRDIGKHFSVNAMLNKESVKQRIDRDGAGISFTEFAYSLLQGYDFAE 181

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L K +   L++GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  GA+W
Sbjct: 182 LNKRHGAVLEIGGSDQWGNITAGIDLTRRLYQKQVFGLTLPLVTKSDGTKFGKTEGGAVW 241

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINEAKKIIAT 304
           LN + TSPY F+Q+W  + DADV  F K  T L + EID +           EA++I+A 
Sbjct: 242 LNAKKTSPYQFYQFWLKVADADVYKFLKYFTFLSIEEIDAVEAKDQASGSKPEAQRILAE 301

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTLIVK 358
           E+T ++HG E    A   +   F     S      + +    +   EVS G+ ++  +VK
Sbjct: 302 EMTRLIHGEEALAAAQRISGSLFAEDQSSLTESDFEQLALDGLPAFEVSDGINVVEALVK 361

Query: 359 AGFATSTNEARRHLKSNAIKINNSIIS-----------NEKLQIKLQDFDSTGNIKLSFG 407
            G A+S  EAR  + S A+ +N                ++   +  +         L  G
Sbjct: 362 TGLASSNKEARGFVNSKAVLLNGKPAEANNPNHAAERPDDACLLTDEHKRFGKYTILRRG 421

Query: 408 KKNHIIC 414
           K+NH + 
Sbjct: 422 KRNHALL 428


>gi|254671610|emb|CBA09297.1| Tyrosyl-tRNA synthetase [Neisseria meningitidis alpha153]
 gi|325127584|gb|EGC50507.1| tyrosyl-tRNA synthetase [Neisseria meningitidis N1568]
          Length = 431

 Score =  488 bits (1257), Expect = e-136,   Method: Composition-based stats.
 Identities = 157/427 (36%), Positives = 227/427 (53%), Gaps = 21/427 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            +  L  RG I Q ++   LD L ++  +  Y G+D TA SLH GHL  ++ L   Q+ G
Sbjct: 3   VIQDLQSRGLIAQTTDIEALDALLNEQKIALYCGFDPTADSLHIGHLLPVLALRRFQQAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H PI+L+GG T +IGDPSF+   R +  ++ +   +E I+   + F+ +  G   A+M N
Sbjct: 63  HTPIALVGGATGMIGDPSFKAAERSLNSAETVAGWVESIRNQLTPFLSF-EGGNAAIMAN 121

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDFVE 186
           N  W   +  +D LR+IG  FSVN ML+ ESV+ R+ R    +SF EF Y +LQ YDF E
Sbjct: 122 NADWFGKMNCLDFLRDIGKHFSVNAMLNKESVKQRIDRDGAGISFTEFAYSLLQGYDFAE 181

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L K +   L++GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  GA+W
Sbjct: 182 LNKRHGAVLEIGGSDQWGNITAGIDLTRRLNQKQVFGLTLPLVTKSDGTKFGKTEGGAVW 241

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINEAKKIIAT 304
           LN + TSPY F+Q+W  + DADV  F K  T L + EID +           EA++I+A 
Sbjct: 242 LNAKKTSPYQFYQFWLKVADADVYKFLKYFTFLSIEEIDAVEAKDQASGSKPEAQRILAE 301

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTLIVK 358
           E+T ++HG E    A   +   F     S      + +    +   EVS G+ ++  +VK
Sbjct: 302 EMTRLIHGEEALAAAQRISESLFAEDQSSLTESDFEQLALDGLPAFEVSDGINVVEALVK 361

Query: 359 AGFATSTNEARRHLKSNAIKINNSIIS-----------NEKLQIKLQDFDSTGNIKLSFG 407
            G A+S  EAR  + S A+ +N                ++   +  +         L  G
Sbjct: 362 TGLASSNKEARGFVNSKAVLLNGKPAEANNPNHAAERPDDACLLNGEHKRFGKYTILRRG 421

Query: 408 KKNHIIC 414
           K+NH + 
Sbjct: 422 KRNHALL 428


>gi|169829622|ref|YP_001699780.1| tyrosyl-tRNA synthetase [Lysinibacillus sphaericus C3-41]
 gi|168994110|gb|ACA41650.1| Tyrosyl-tRNA synthetase [Lysinibacillus sphaericus C3-41]
          Length = 435

 Score =  488 bits (1257), Expect = e-136,   Method: Composition-based stats.
 Identities = 140/426 (32%), Positives = 237/426 (55%), Gaps = 20/426 (4%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           ++ L  L  RG ++Q ++   +  L  +  V+ Y G D TA S+H GH+  L+ L   QK
Sbjct: 16  NELLQDLEWRGLLYQQTDADGMAKLLEEQSVSLYCGVDPTADSMHIGHIVPLLTLRRFQK 75

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+PI L+GG T +IGDPS R E R++   ++I +N++ I+G       +      A +
Sbjct: 76  AGHRPILLVGGATGMIGDPSGRSEERQLQTVEQIDKNVQGIRGQLERIFDFAEDGNGAQL 135

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  W+ +I  I+ LR+ G   +VN ML+ +++ SRL  +  +SF EF Y ++Q  D+ 
Sbjct: 136 VNNRDWIGNINTIEFLRDYGKLINVNYMLAKDTIASRL--DTGISFTEFAYTLIQGIDYN 193

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSG 243
            L  +Y+CR+Q+GGSDQWGNI  G+++  +      K F +T PL+T A GTK GKT  G
Sbjct: 194 HLYNHYNCRIQVGGSDQWGNITTGLEVIRKTHEEETKAFGITIPLVTKADGTKFGKTAGG 253

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA--KLQGKEINEAKKI 301
           A+WL+ + TSPY F+Q+W N  DADV+ + K  T L   EI+ +A    +   + +A+K 
Sbjct: 254 AVWLDGKKTSPYEFYQFWINAADADVIKYLKIFTFLTREEIESLAVSVEEEPHLRKAQKS 313

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMG 351
           +A E+T ++HG+   E+A       F   + +          + +P+I ++K++      
Sbjct: 314 LAEEMTRLIHGQAALEQAIRITAALFSGDLKALSAEEMKDAFKDVPSIEMAKED----KN 369

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           ++ L+V+AG ++S  +AR  + + AI +N   +++ +  +  +D        +  GKK +
Sbjct: 370 IVDLLVEAGISSSKRQAREDVSNGAISVNGEKVTDLEYVVDAKDRLEDAFSIVRRGKKKY 429

Query: 412 IICHLC 417
            +    
Sbjct: 430 HMVKFV 435


>gi|329118944|ref|ZP_08247639.1| tyrosine--tRNA ligase [Neisseria bacilliformis ATCC BAA-1200]
 gi|327464972|gb|EGF11262.1| tyrosine--tRNA ligase [Neisseria bacilliformis ATCC BAA-1200]
          Length = 432

 Score =  488 bits (1257), Expect = e-136,   Method: Composition-based stats.
 Identities = 156/429 (36%), Positives = 230/429 (53%), Gaps = 21/429 (4%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +  +  L  RG I Q ++   LD   ++  ++ Y G+D TA SLH GHL  ++ L   Q+
Sbjct: 2   TSIIQDLQSRGLIAQTTDIAALDAFLTENKISLYCGFDPTADSLHIGHLLPVLALRRFQQ 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH PI+L+GG T +IGDPSF+   R +   + +   +  I+     F+ +  G+  A+M
Sbjct: 62  AGHTPIALVGGATGMIGDPSFKAVERSLNTPETVAGWVASIRAQLEPFLSF-EGENAAIM 120

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYDF 184
            NN  W   +  +D LR+IG  FSVN ML+ ESV+ R+ R+   +SF EF Y +LQ+YDF
Sbjct: 121 ANNADWFGGMNCLDFLRDIGKHFSVNAMLNKESVKQRIDRDDVGISFTEFAYTLLQSYDF 180

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
            EL K +   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  GA
Sbjct: 181 AELNKRHGATLQIGGSDQWGNITNGIDLTRRLNQKQVFGLTLPLVTKSDGTKFGKTEGGA 240

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINEAKKII 302
           +WLN + TSPY F+Q+W  + DADV  F K  T L ++EID +           EA++++
Sbjct: 241 VWLNAKKTSPYQFYQFWLKVADADVYKFLKYFTFLSVAEIDAIEAKDQASGAKPEAQRVL 300

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTLI 356
           A E+T ++HG E  + A   +   F     S      + +    +   EVS G+ ++  +
Sbjct: 301 AEEMTRLIHGEEALQAAQRISESLFAEDQSSLTESDFEQLALDGLPAFEVSDGLNVVEAL 360

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIIS-----------NEKLQIKLQDFDSTGNIKLS 405
           VK G A S  EAR  + S A+ +N                ++   +K +         L 
Sbjct: 361 VKTGLAQSNKEARGFVNSKAVLLNGQAAEANNPNPSAERPDDAYLLKDEHKRFGKYTLLR 420

Query: 406 FGKKNHIIC 414
            GK+NH + 
Sbjct: 421 RGKRNHALL 429


>gi|229497108|ref|ZP_04390812.1| tyrosyl-tRNA synthetase [Porphyromonas endodontalis ATCC 35406]
 gi|229316033|gb|EEN81962.1| tyrosyl-tRNA synthetase [Porphyromonas endodontalis ATCC 35406]
          Length = 431

 Score =  488 bits (1257), Expect = e-136,   Method: Composition-based stats.
 Identities = 144/429 (33%), Positives = 236/429 (55%), Gaps = 22/429 (5%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +DF+  L  RG +H I    E     S+ + TAY+G D TA SLH GHL  +M+L   Q+
Sbjct: 2   NDFVEELRWRGMLHNIMPGTE--EQLSKELSTAYVGIDPTADSLHIGHLVGVMMLRHFQR 59

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA-L 124
            GH+PI+L+GG T +IGDPS +   R ++  + ++ N E I    + F+ + + + +A  
Sbjct: 60  FGHRPIALLGGATGMIGDPSMKSAERNLLSLETLRHNQEAIGKQLAKFLDFDSEQPNAAK 119

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK--REQSLSFLEFNYMILQAY 182
           ++NN  W+   +++D +RE+G   +VN M++ +SV+ R +      LSF EF+Y +LQ Y
Sbjct: 120 LVNNYDWMSEWRFLDFIREVGKHITVNYMMAKDSVKKRFEGTAGSGLSFTEFSYQLLQGY 179

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           D++ L ++ +CRLQMGGSDQWGNI  G +L  R++  + FALT PL+T A G K GKT  
Sbjct: 180 DYLYLYRHENCRLQMGGSDQWGNITTGTELIRRIEGGEAFALTCPLITKADGGKFGKTEK 239

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKK 300
           G +WL++  TSPY F+Q+W N+ D D   + K  T L   EI+ +   Q     +   ++
Sbjct: 240 GNVWLDRRYTSPYAFYQFWLNVSDEDAARYIKIFTFLGKEEIEDLVAQQAAAAHLRPLQR 299

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDEV 346
            +A E+T +VH RE+ E A +A+   F                    + +P  SI++D +
Sbjct: 300 RLAEELTVLVHSREDYEAAVSASEILFGNGTADALRSLDEEMLLSVMEGVPHFSIARDTL 359

Query: 347 SRGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLS 405
           +     + L  + A    S  E R+ +KS  + +N + +++ +  +   D  +   + + 
Sbjct: 360 ATQPKAVDLFTEGAAIFPSKGELRKLIKSGGVSLNKAKLTDTEATVSASDLIAGRYLLVQ 419

Query: 406 FGKKNHIIC 414
            GKK + + 
Sbjct: 420 RGKKQYYLV 428


>gi|218767580|ref|YP_002342092.1| putative tyrosyl-tRNA synthetase [Neisseria meningitidis Z2491]
 gi|81543095|sp|Q9JVY6|SYY_NEIMA RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|121051588|emb|CAM07886.1| putative tyrosyl-tRNA synthetase [Neisseria meningitidis Z2491]
          Length = 431

 Score =  488 bits (1257), Expect = e-136,   Method: Composition-based stats.
 Identities = 156/427 (36%), Positives = 227/427 (53%), Gaps = 21/427 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            +  L  RG I Q ++   LD L ++  +  Y G+D TA SLH GHL  ++ L   Q+ G
Sbjct: 3   VIQDLQSRGLIAQTTDIEALDALLNEQKIALYCGFDPTADSLHIGHLLPVLALRRFQQAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H PI+L+GG T +IGDPSF+   R +  ++ +   +E I+   + F+ +  G   A+M N
Sbjct: 63  HTPIALVGGATGMIGDPSFKAAERSLNSAETVAGWVESIRNQLTPFLSF-EGGNAAIMAN 121

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDFVE 186
           N  W   +  +D LR+IG  FSVN ML+ ESV+ R+ R    +SF EF Y +LQ YDF E
Sbjct: 122 NADWFGKMNCLDFLRDIGKHFSVNAMLNKESVKQRIDRDGAGISFTEFAYSLLQGYDFAE 181

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L K +   L++GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  GA+W
Sbjct: 182 LNKRHGAVLEIGGSDQWGNITAGIDLTRRLNQKQVFGLTLPLVTKSDGTKFGKTEGGAVW 241

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINEAKKIIAT 304
           LN + TSPY F+Q+W  + DADV  F K  T L + EID +           EA++I+A 
Sbjct: 242 LNAKKTSPYQFYQFWLKVADADVYKFLKYFTFLSIEEIDAIEAKDKASGTKPEAQRILAE 301

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTLIVK 358
           E+T ++HG    + A   +   F     S      + +    +   EVS G+ ++  +VK
Sbjct: 302 EMTRLIHGEAALQAAQRISESLFAEDQSSLTESDFEQLALDGLPAFEVSDGINVVEALVK 361

Query: 359 AGFATSTNEARRHLKSNAIKINNSIIS-----------NEKLQIKLQDFDSTGNIKLSFG 407
            G A+S  EAR  + S A+ +N                ++   +  +         L  G
Sbjct: 362 TGLASSNKEARGFVNSKAVLLNGKPAEANNPNHAAERPDDACLLTDEHKRFGKYTILRRG 421

Query: 408 KKNHIIC 414
           K+NH + 
Sbjct: 422 KRNHALL 428


>gi|160891750|ref|ZP_02072753.1| hypothetical protein BACUNI_04206 [Bacteroides uniformis ATCC 8492]
 gi|156859157|gb|EDO52588.1| hypothetical protein BACUNI_04206 [Bacteroides uniformis ATCC 8492]
          Length = 430

 Score =  488 bits (1257), Expect = e-136,   Method: Composition-based stats.
 Identities = 152/428 (35%), Positives = 226/428 (52%), Gaps = 22/428 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG +H +    E   L ++  VTAYIG+D TA SLH GHL  +M+L   Q+ 
Sbjct: 2   NFVEELRWRGMLHDMMPGTE--ELLAKEQVTAYIGFDPTADSLHIGHLCSVMILRHFQRC 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG-TGKTDALM 125
           GHKP++L+GG T +IGDPS +   R ++  + +Q N+  +K   S F+ +       A +
Sbjct: 60  GHKPLALIGGATGMIGDPSGKSAERNLLTEETLQRNLAGMKAQLSKFLDFDSDAPNRAEL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQAYD 183
           +NN  W+ +  ++D  RE+G   +VN M++ +SV+ RL  E    LSF EF Y +LQ YD
Sbjct: 120 VNNYDWMKNFTFLDFAREVGKHITVNYMMAKDSVKKRLNGEARDGLSFTEFTYQLLQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ L +   C+LQMGGSDQWGNI  G +L  R    ++FALTSPL+T A G K GKT SG
Sbjct: 180 FLHLYETKGCKLQMGGSDQWGNITTGAELIRRTNGGEVFALTSPLITKADGGKFGKTESG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKKI 301
            IWL+   TSPY F+Q+W N+ D D   + K  T L   EID +         +   +K 
Sbjct: 240 NIWLDPRYTSPYKFYQFWLNVSDEDAKRYIKIFTALSKEEIDALTAEHDAAPHLRVLQKC 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDEVS 347
           +A E+T MVH  E+   A  A+   F  +                 + +P   IS+D ++
Sbjct: 300 LAKEVTIMVHSEEDYNAAVDASNILFGNATSDALKKLDEDTLLAVFEGVPQFEISRDALA 359

Query: 348 RGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+  + L V  A    S  E R+ ++   + +N   ++     I   D      + +  
Sbjct: 360 AGVKAVDLFVDNAAVFASKGEMRKLVQGGGVSLNKEKLAAFDQVITTADLLDEKYLLVQR 419

Query: 407 GKKNHIIC 414
           GKKN+ + 
Sbjct: 420 GKKNYYLI 427


>gi|71902745|ref|YP_279548.1| tyrosyl-tRNA synthetase [Streptococcus pyogenes MGAS6180]
 gi|97202245|sp|Q48VR3|SYY_STRPM RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|71801840|gb|AAX71193.1| tyrosyl-tRNA synthetase [Streptococcus pyogenes MGAS6180]
          Length = 418

 Score =  488 bits (1257), Expect = e-136,   Method: Composition-based stats.
 Identities = 144/417 (34%), Positives = 225/417 (53%), Gaps = 11/417 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L  RG + Q ++ + L    ++G V+ Y GYD TA SLH GHL  ++    LQ  
Sbjct: 2   NIFEELKARGLVFQTTDEQALVKALTEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP +L+GG T +IGDPSF+D  R +   + + E  +KIKG  S+F+ +  G   A ++
Sbjct: 62  GHKPYALVGGATGLIGDPSFKDAERSLQTKETVLEWSDKIKGQLSTFLDFENGDNKAELV 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I +ID LR++G +F+VN M+S +SV+ R+  E  +S+ EF Y I+Q YDF E
Sbjct: 122 NNYDWFSQISFIDFLRDVGKYFTVNYMMSKDSVKKRI--ETGISYTEFAYQIMQGYDFYE 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L   ++  LQ+GGSDQWGN+  G +L  +        +T PL+T ++G K GK+   A+W
Sbjct: 180 LNDKHNVTLQIGGSDQWGNMTAGTELLRKKADKTGHVMTVPLITDSTGKKFGKSEGNAVW 239

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIAT 304
           L+ + TSPY  +Q+W N+ D D V F K  T L + EI  +        +E  A+K +A 
Sbjct: 240 LDADKTSPYEMYQFWLNVMDDDAVRFLKIFTFLFLDEIAEIETQFNAARHERLAQKTLAR 299

Query: 305 EITTMVHGREEAEKAATAAMECFDMSI-------HSQHMPTISISKDEVSRGMGLLTLIV 357
           E+ T+VHG E  ++A     + F  +I         Q +  +     +    + L+ ++V
Sbjct: 300 EVVTLVHGEEAYKQALNITEQLFAGNIKNLSANELKQGLSNVPNYHVQSEDSLNLVDMLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            AG + S  +AR  +++ AI IN   + +   Q+   D        +  GKK + + 
Sbjct: 360 TAGISPSKRQAREDVQNGAIYINGDRVQDLDYQLSNDDKIDDQLTVIRRGKKKYAVL 416


>gi|86132456|ref|ZP_01051050.1| Tyrosyl-tRNA synthetase [Dokdonia donghaensis MED134]
 gi|85817017|gb|EAQ38201.1| Tyrosyl-tRNA synthetase [Dokdonia donghaensis MED134]
          Length = 431

 Score =  488 bits (1257), Expect = e-136,   Method: Composition-based stats.
 Identities = 153/430 (35%), Positives = 236/430 (54%), Gaps = 23/430 (5%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
            +F+  L  RG +H      E      + + +AY+G+D TA SLH G+L  +MLL   Q+
Sbjct: 3   KNFVEELKWRGMVHDAMPQTE--EHLMEAMRSAYVGFDPTADSLHIGNLVPIMLLAHFQR 60

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG-KTDAL 124
            GH+P++L+GG T +IGDPS +   R ++  + ++ N E ++   S F+ + +G +  AL
Sbjct: 61  AGHRPVALVGGATGMIGDPSGKSSERNLLDEETLRHNQECVRKQLSQFLDFTSGAQNQAL 120

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQAY 182
           M+NN  W+    ++D +R++G   +VN M++ +SV++RL  E    +SF EF Y ++Q +
Sbjct: 121 MVNNYDWMKEFSFLDFIRDVGKHITVNYMMAKDSVKNRLTGESADGMSFTEFTYQMVQGF 180

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DF+ L KN DC LQMGGSDQWGNI  G +L  R+   K +ALT PL+T + G+K GK+  
Sbjct: 181 DFLHLYKNNDCTLQMGGSDQWGNITTGTELIRRIAGGKGYALTCPLITKSDGSKFGKSEG 240

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKK 300
           G +WL+   TSPY F+QYW N  D D   + K  T L   EI+ + +   +  ++   +K
Sbjct: 241 GNVWLDANRTSPYKFYQYWLNTSDEDAAKYIKIFTFLDREEIEALIETHKEAPHQRALQK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDEV 346
            +A E+TT VH  E   KA  A+   F  S                 + +P   I+K E+
Sbjct: 301 RLAEEVTTTVHDEEALTKAIAASNMLFGKSTSEDLKSLDEATFLDVFEGVPQAEIAKTEI 360

Query: 347 SRGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLS 405
             G+ ++  + +  GF  S  EARR LK N+I +N   +  E   I+  D  +   I L 
Sbjct: 361 EAGLDMIAALAEKTGFLKSNGEARRALKENSISLNKEKV-GEDRTIQSSDLINDTFILLQ 419

Query: 406 FGKKNHIICH 415
            GKKN+ +  
Sbjct: 420 RGKKNYFLIR 429


>gi|329962748|ref|ZP_08300671.1| tyrosine--tRNA ligase [Bacteroides fluxus YIT 12057]
 gi|328529582|gb|EGF56485.1| tyrosine--tRNA ligase [Bacteroides fluxus YIT 12057]
          Length = 430

 Score =  488 bits (1257), Expect = e-136,   Method: Composition-based stats.
 Identities = 152/428 (35%), Positives = 226/428 (52%), Gaps = 22/428 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG +H +    E   L ++  VTAYIG+D TA SLH GHL  +M+L   Q+ 
Sbjct: 2   NFVEELRWRGMLHDMMPGTE--ELLAKEQVTAYIGFDPTADSLHIGHLCSVMILRHFQRC 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG-TGKTDALM 125
           GHKP++L+GG T +IGDPS +   R ++  + +Q N+  +K   S F+ +       A +
Sbjct: 60  GHKPLALIGGATGMIGDPSGKSAERNLLTEETLQRNMAGMKAQLSKFLDFDSDAPNRAEL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQAYD 183
           +NN  W+    ++D  RE+G   +VN M++ +SV+ RL  E    LSF EF Y +LQ YD
Sbjct: 120 VNNYDWMKDFSFLDFAREVGKHITVNYMMAKDSVKKRLNGEARDGLSFTEFTYQLLQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ L +   CRLQMGGSDQWGNI  G +L  R    ++FALTSPL+T A G K GKT SG
Sbjct: 180 FLHLYETKGCRLQMGGSDQWGNITTGAELIRRTNGGEVFALTSPLITKADGGKFGKTESG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKKI 301
            IWL+   TSPY F+Q+W N+ DAD   + K  T L   E+D +         +   +K 
Sbjct: 240 NIWLDPRYTSPYKFYQFWLNVSDADASRYIKIFTALTKEEVDALIAEHEAAPHLRVLQKR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDEVS 347
           +A E+T MVH  E+   A  A+   F  +                 + +P   IS+D ++
Sbjct: 300 LAKEVTIMVHSEEDYNAAVDASNILFGNATSDALKKLDEDTLLAVFEGVPQFEISRDALA 359

Query: 348 RGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+  + L V  A    S  E R+ ++   + +N   ++     +   D      + +  
Sbjct: 360 AGVKAVDLFVDNAAVFASKGEMRKLVQGGGVSLNKEKLAAFDQVVTTADLLDDKYLLVQR 419

Query: 407 GKKNHIIC 414
           GKKN+ + 
Sbjct: 420 GKKNYYLI 427


>gi|53711359|ref|YP_097351.1| tyrosyl-tRNA synthetase [Bacteroides fragilis YCH46]
 gi|265764804|ref|ZP_06093079.1| tyrosyl-tRNA synthetase [Bacteroides sp. 2_1_16]
 gi|81384005|sp|Q650K7|SYY_BACFR RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|52214224|dbj|BAD46817.1| tyrosyl-tRNA synthetase [Bacteroides fragilis YCH46]
 gi|263254188|gb|EEZ25622.1| tyrosyl-tRNA synthetase [Bacteroides sp. 2_1_16]
          Length = 430

 Score =  488 bits (1257), Expect = e-136,   Method: Composition-based stats.
 Identities = 150/428 (35%), Positives = 223/428 (52%), Gaps = 22/428 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG +H +    E   L ++  VTAY+G D TA SLH GHL  +M+L   Q+ 
Sbjct: 2   NFVEELRWRGMVHDMMPGTE--ELLAKEQVTAYVGIDPTADSLHIGHLCGVMILRHFQRC 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG-TGKTDALM 125
           GHKP++L+GG T +IGDPS +   R ++  + ++ N   IK   + F+ +       A +
Sbjct: 60  GHKPLALIGGATGMIGDPSGKSAERNLLDEETLRHNQACIKKQLAKFLDFESDAPNRAEL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQAYD 183
           +NN  W+    ++D  RE+G   +VN M++ ESV+ RL  E    LSF EF Y +LQ YD
Sbjct: 120 VNNYDWMKEFTFLDFAREVGKHITVNYMMAKESVKKRLNGEARDGLSFTEFTYQLLQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ L +   C+LQMGGSDQWGNI  G +L  R    + +ALT PL+T A G K GKT SG
Sbjct: 180 FLHLYETKGCKLQMGGSDQWGNITTGTELIRRTNGGEAYALTCPLITKADGGKFGKTESG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKI 301
            IWL+   TSPY F+Q+W N+ DAD   + K  T+L  +EID       +   +   +K 
Sbjct: 240 NIWLDPRYTSPYKFYQFWLNVSDADAERYIKIFTSLDKAEIDGLVAEHNEAPHLRVLQKR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDEVS 347
           +A E+T MVH  E+   A  A+   F  +                 + +P   IS+D + 
Sbjct: 300 LAKEVTVMVHSEEDYNAAVDASNILFGNATSDALKKLDEDTLLAVFEGVPQFEISRDALV 359

Query: 348 RGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+  + L V  A    S  E R+ ++   + +N   ++     I   D      + +  
Sbjct: 360 EGVKAVDLFVDNAAVFASKGEMRKLVQGGGVSLNKEKLAAFDQVITTADLLDEKYLLVQR 419

Query: 407 GKKNHIIC 414
           GKKN+ + 
Sbjct: 420 GKKNYYLI 427


>gi|317474726|ref|ZP_07934000.1| tyrosyl-tRNA synthetase [Bacteroides eggerthii 1_2_48FAA]
 gi|316909407|gb|EFV31087.1| tyrosyl-tRNA synthetase [Bacteroides eggerthii 1_2_48FAA]
          Length = 430

 Score =  488 bits (1257), Expect = e-136,   Method: Composition-based stats.
 Identities = 151/428 (35%), Positives = 226/428 (52%), Gaps = 22/428 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG +H +    E   L ++  VTAYIG+D TA SLH GHL  +M+L   Q+ 
Sbjct: 2   NFVEELKWRGMLHDMMPGTE--ELLAKEQVTAYIGFDPTADSLHIGHLCSVMILRHFQRC 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG-TGKTDALM 125
           GHKP++L+GG T +IGDPS +   R ++  + +Q N+  +K   S F+ +       A +
Sbjct: 60  GHKPLALIGGATGMIGDPSGKSAERNLLTEETLQRNMAGMKKQLSKFLDFDSDAPNRAEL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQAYD 183
           +NN  W+    ++D  RE+G   +VN M++ +SV+ RL  E    LSF EF Y +LQ YD
Sbjct: 120 VNNYDWMKGFSFLDFAREVGKHITVNYMMAKDSVKKRLNGEARDGLSFTEFTYQLLQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ L +   C+LQMGGSDQWGNI  G +L  R    ++FALTSPL+T A G K GKT SG
Sbjct: 180 FLHLYETKGCKLQMGGSDQWGNITTGAELIRRTNGGEVFALTSPLITKADGGKFGKTESG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKKI 301
            IWL+   TSPY F+Q+W N+ DAD   + K  T+L   EI+ +         +   +K 
Sbjct: 240 NIWLDPRYTSPYKFYQFWLNVSDADAARYIKIFTSLSKEEIEALTAEHETAPHLRVLQKR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDEVS 347
           +A E+T MVH  E+   A  A+   F  +                 + +P   +S+D ++
Sbjct: 300 LAKEVTIMVHSEEDYNAAVDASNILFGNATSEALKKLDEDTLLAVFEGVPQFEVSRDALT 359

Query: 348 RGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+  + L V  A    S  E R+ ++   I +N   +      +   D      + +  
Sbjct: 360 AGVKAVDLFVDNAAVFASKGEMRKLVQGGGISLNKEKLVAFDQVVTTADLLDDKYLLVQR 419

Query: 407 GKKNHIIC 414
           GKKN+ + 
Sbjct: 420 GKKNYYLI 427


>gi|145295540|ref|YP_001138361.1| tyrosyl-tRNA synthetase [Corynebacterium glutamicum R]
 gi|140845460|dbj|BAF54459.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 420

 Score =  488 bits (1257), Expect = e-136,   Method: Composition-based stats.
 Identities = 147/423 (34%), Positives = 229/423 (54%), Gaps = 15/423 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  LS RG I+Q ++   L    S   +T Y G+D T  SLHAGHL  L++L   Q+ 
Sbjct: 2   NIIDELSWRGLINQSTDLEALREEAST-PITLYCGFDPTGPSLHAGHLVPLLMLRRFQQA 60

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH PI L GG T +IGDP    E R M  +  +    E+I G  S F+ +  G+  A ++
Sbjct: 61  GHNPIVLAGGATGMIGDPRDVGE-RTMNSADTVSVWAERISGQLSRFVDF-DGEHAARLV 118

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   +  +  LR++G  FS+N ML+ ++V+ RL+ +  +S+ EF+YM+LQA D+VE
Sbjct: 119 NNAEWTNEMSVVTFLRDVGKHFSLNTMLARDTVKRRLESD-GISYTEFSYMLLQANDYVE 177

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT-LSGAI 245
           L K + C LQ+GG DQWGNI+ G+DL  R+    + A+T PL+T + G K GK+   G++
Sbjct: 178 LNKRFGCTLQVGGGDQWGNIVSGVDLNRRVNGTSVHAVTVPLVTDSDGKKFGKSTGGGSL 237

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIA 303
           WL+ EMTSPY ++QY+ N  DADV+ + +  T L   E+  +     +     EA++ +A
Sbjct: 238 WLDPEMTSPYAWYQYFINASDADVIRYLRWFTFLTQEELAELEVEVAERPFKREAQRRLA 297

Query: 304 TEITTMVHGREEAEKAATAAMECF--------DMSIHSQHMPTISISKDEVSRGMGLLTL 355
            E+T +VHG E  E    AA   F        D    +  +   ++++ +      ++ L
Sbjct: 298 REMTNLVHGTEATEAVELAAQALFGRAELRDLDEKTLAASVSETAVAEIKAGEPRTIIDL 357

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +V +G A S   A+R +K     +NN  I ++  +   +D      + L  GKKN     
Sbjct: 358 LVASGLADSKGAAKRAVKEGGAYVNNERIESDDWEPSAEDLLHGSWLVLRRGKKNFAGVQ 417

Query: 416 LCG 418
           + G
Sbjct: 418 ILG 420


>gi|296315348|ref|ZP_06865289.1| tyrosine--tRNA ligase [Neisseria polysaccharea ATCC 43768]
 gi|296837696|gb|EFH21634.1| tyrosine--tRNA ligase [Neisseria polysaccharea ATCC 43768]
          Length = 431

 Score =  488 bits (1256), Expect = e-136,   Method: Composition-based stats.
 Identities = 156/427 (36%), Positives = 228/427 (53%), Gaps = 21/427 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            +  L  RG I Q ++   LD L ++  +  Y G+D TA SLH GHL  ++ L   Q+ G
Sbjct: 3   VIQDLQSRGLIAQTTDIEALDALLNEQKIALYCGFDPTADSLHIGHLLPVLALRRFQQAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H PI+L+GG T +IGDPSF+   R +  ++ +   +E I+   + F+ +  G   A+M N
Sbjct: 63  HTPIALVGGATGMIGDPSFKAAERSLNSAETVAGWVESIRNQLTPFLSF-EGGNAAIMAN 121

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDFVE 186
           N  W   +  +D LR+IG  FSVN ML+ ESV+ R+ R    +SF EF Y +LQ YDF E
Sbjct: 122 NADWFGKMNCLDFLRDIGKHFSVNAMLNKESVKQRIDRDGAGISFTEFAYSLLQGYDFAE 181

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L K +   L++GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  GA+W
Sbjct: 182 LNKRHGAVLEIGGSDQWGNITAGIDLTRRLHQKQVFGLTLPLVTKSDGTKFGKTEGGAVW 241

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINEAKKIIAT 304
           LN + TSPY F+Q+W  + DADV  F K  T L + EID +           EA++I+A 
Sbjct: 242 LNAKKTSPYQFYQFWLKVADADVYKFLKYFTFLSVEEIDAIEAKDKASGSKPEAQRILAE 301

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTLIVK 358
           E+T ++HG    + A   +   F     S      + +    +   EVS G+ ++ ++VK
Sbjct: 302 EMTRLIHGEAALQAAQRISESLFAEDQSSLTESDFEQLALDGLPAFEVSDGINVVEVLVK 361

Query: 359 AGFATSTNEARRHLKSNAIKINNSIIS-----------NEKLQIKLQDFDSTGNIKLSFG 407
            G A+S  EAR  + S A+ +N                ++   +  +         L  G
Sbjct: 362 TGLASSNKEARGFVNSKAVLLNGKPAEANNPNHAAERPDDACLLTDEHKRFGKYTILRRG 421

Query: 408 KKNHIIC 414
           K+NH + 
Sbjct: 422 KRNHALL 428


>gi|260907482|ref|ZP_05915804.1| tyrosyl-tRNA synthetase [Brevibacterium linens BL2]
          Length = 428

 Score =  488 bits (1256), Expect = e-136,   Method: Composition-based stats.
 Identities = 154/420 (36%), Positives = 233/420 (55%), Gaps = 18/420 (4%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +D  S L  RG +   ++   L    ++  +T Y+G+D TA SLH G+L QL+    LQK
Sbjct: 2   TDIFSELKARGLVSVSTDEAALQKALNEESLTYYVGFDPTAPSLHMGNLVQLITAARLQK 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH P++L+GG T +IGDP    E R +   + ++E +EKI+     F+ + +G   A +
Sbjct: 62  AGHNPLALVGGATGLIGDPRMSGE-RTLNPREVVEEWLEKIRAQVEKFLDF-SGPNAAQV 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  W   +  ID LR+IG  F +NRML+ ESV +RL  E  +SF EF+Y +LQ  D++
Sbjct: 120 VNNYEWTSEMSAIDFLRDIGKHFPMNRMLAKESVSARLNSEAGISFTEFSYQVLQGNDYL 179

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           EL + Y C LQ GGSDQWGN+  G+DL  R++   + AL +PL+T A GTK GKT SG +
Sbjct: 180 ELHRRYGCSLQTGGSDQWGNLTSGVDLIRRVEQHSVHALATPLITKADGTKFGKTESGTV 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIA 303
           WL++ +TSPY F Q+W N DD DVV + K  +   + EI+++            A+K++A
Sbjct: 240 WLDESLTSPYAFSQFWLNADDRDVVKYLKVFSFRSLEEIEQIEAEFTAAPHTRLAQKVLA 299

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHS-----------QHMPTISISKDEVSRGMGL 352
            ++TT+VHG+E+ E+A  AA   F     +             +P   +S  +++ G+ +
Sbjct: 300 EDVTTLVHGKEKYEQAIAAASALFGGGELASLDASTLGAATSELPRGDVSSAQLAEGVPV 359

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD---STGNIKLSFGKK 409
               V AG   S  EARR +K     +NN  ++ +   +   +       G I L  GKK
Sbjct: 360 ADAFVTAGIVKSKGEARRVIKDGGAYVNNVKVTGDDQTLTPTEVLPTEGGGVILLRRGKK 419


>gi|325197662|gb|ADY93118.1| tyrosyl-tRNA synthetase [Neisseria meningitidis G2136]
          Length = 431

 Score =  488 bits (1256), Expect = e-136,   Method: Composition-based stats.
 Identities = 158/427 (37%), Positives = 228/427 (53%), Gaps = 21/427 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            +  L  RG I Q ++   LD L ++  +  Y G+D TA SLH GHL  ++ L   Q+ G
Sbjct: 3   VIQDLQSRGLIAQTTDIEALDALLNEQKIALYCGFDPTADSLHIGHLLPVLALRRFQQAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H PI+L+GG T +IGDPSF+   R +  ++ +   +E I+   + F+ +  G   A+M N
Sbjct: 63  HTPIALVGGATGMIGDPSFKAAERSLNSAETVAGWVESIRNQLTPFLSF-EGGNAAIMAN 121

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDFVE 186
           N  W  S+  +D LR+IG  FSVN ML+ ESV+ R+ R    +SF EF Y +LQ YDF E
Sbjct: 122 NADWFGSMNCLDFLRDIGKHFSVNAMLNKESVKQRIDRDGAGISFTEFAYSLLQGYDFAE 181

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L K +   L++GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  GA+W
Sbjct: 182 LNKRHGAVLEIGGSDQWGNITAGIDLTRRLNQKQVFGLTLPLVTKSDGTKFGKTEGGAVW 241

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINEAKKIIAT 304
           LN + TSPY F+Q+W  + DADV  F K  T L + EID +           EA++I+A 
Sbjct: 242 LNAKKTSPYQFYQFWLKVADADVYKFLKYFTFLSIEEIDAIEAKDKASGSKPEAQRILAE 301

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTLIVK 358
           E+T ++HG E    A   +   F     S      + +    +   EVS G+ ++  +VK
Sbjct: 302 EMTRLIHGEEALAAAQRISESLFAEDQSSLTESDFEQLALDGLPAFEVSDGINVVEALVK 361

Query: 359 AGFATSTNEARRHLKSNAIKINNSIIS-----------NEKLQIKLQDFDSTGNIKLSFG 407
            G A+S  EAR  + S A+ +N                ++   +  +         L  G
Sbjct: 362 TGLASSNKEARGFVNSKAVLLNGKPAEANNPNHAAERPDDACLLNGEHKRFGKYTILRRG 421

Query: 408 KKNHIIC 414
           K+NH + 
Sbjct: 422 KRNHALL 428


>gi|313888608|ref|ZP_07822273.1| tyrosine--tRNA ligase [Peptoniphilus harei ACS-146-V-Sch2b]
 gi|312845337|gb|EFR32733.1| tyrosine--tRNA ligase [Peptoniphilus harei ACS-146-V-Sch2b]
          Length = 424

 Score =  488 bits (1256), Expect = e-136,   Method: Composition-based stats.
 Identities = 163/414 (39%), Positives = 251/414 (60%), Gaps = 5/414 (1%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           +  F  +   ILSERG++ Q +   EL  +  +  V  YIG+D TA SL  GH  Q+ ++
Sbjct: 13  LEEFMENVFDILSERGYLDQCTYEDELREMLGKESVPFYIGFDATADSLTLGHFIQIRVM 72

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             +Q  GH PI+L+GGGT+ IGDPS + + R +M  + I  N  + K   SSF+ +  GK
Sbjct: 73  QHMQNAGHVPIALLGGGTTTIGDPSGKSDMRSLMNRETIDYNARRFKEQISSFLDFSDGK 132

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               + NN  WL  + +++ +REIG  FSVNRML F+  ++R+  EQ L+F EF+YM++Q
Sbjct: 133 G--YIENNADWLTKLNFLEFVREIGIHFSVNRMLQFDCYKNRM--EQGLTFFEFSYMLMQ 188

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           +YD++ L + + C+L++GGSDQW NI+ G +L  +L+  K++A+T  LLTTA+G KMGKT
Sbjct: 189 SYDYLYLYRKHGCKLEVGGSDQWSNILGGYELVRKLEGDKVYAMTFKLLTTAAGIKMGKT 248

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           ++GAIWL+ E T+PY  +QY RN DD DV+ F K LT LP+ +I    KL+G EIN+AK+
Sbjct: 249 MAGAIWLDPEKTTPYEMFQYLRNCDDRDVIKFMKLLTMLPLDKIAEYEKLEGAEINKAKE 308

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           ++A E+   +HG E A+ A  A+   F     S+ +P       +    +G+L L+ +  
Sbjct: 309 VLAYEVVKDIHGEEAAKAALDASHSLFGGDKASEDIPATEFEAAKFDEPVGILNLMTELR 368

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
              + +E RR +    + I++  I++ KL+I   +F   G I +  GKK +   
Sbjct: 369 LIKTNSEGRRLITQGGVSIDDEKITDPKLEITKDNF-KDGEIIIRKGKKVYHKV 421


>gi|239940297|ref|ZP_04692234.1| putative tyrosyl-tRNA synthetase [Streptomyces roseosporus NRRL
           15998]
 gi|239986779|ref|ZP_04707443.1| putative tyrosyl-tRNA synthetase [Streptomyces roseosporus NRRL
           11379]
 gi|291443730|ref|ZP_06583120.1| tyrosyl-tRNA synthetase [Streptomyces roseosporus NRRL 15998]
 gi|291346677|gb|EFE73581.1| tyrosyl-tRNA synthetase [Streptomyces roseosporus NRRL 15998]
          Length = 423

 Score =  488 bits (1256), Expect = e-136,   Method: Composition-based stats.
 Identities = 145/421 (34%), Positives = 225/421 (53%), Gaps = 11/421 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +D +  L  RG   Q ++   L    + G VT Y G+D TA+SLH GHL Q++ +  LQ+
Sbjct: 2   TDIVDELKWRGLFAQSTDEDALRKALADGPVTFYCGFDPTAASLHVGHLVQVLTMRRLQQ 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            G KP++L+GG T  IGDP      R +   + I   + +++G    F+ +  G   A M
Sbjct: 62  AGLKPLALVGGATGQIGDPRP-TAERTLNDPETIAAWVRRLRGQIEPFLTF-EGPNAATM 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  W   +  I+ LR+IG  F VN+ML+ +SV  RL+ ++ +S+ EF+Y +LQ  DF+
Sbjct: 120 VNNLDWTAGMSAIEFLRDIGKHFRVNKMLTKDSVARRLESQEGISYTEFSYQLLQGMDFL 179

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASGTKMGKTLSGA 244
           EL + + C LQ GGSDQWGN+  GIDL  RL+    + AL +PL+T A GTK GK+ SGA
Sbjct: 180 ELYRRHGCTLQQGGSDQWGNLTAGIDLIHRLEPGAVVHALATPLMTKADGTKFGKSESGA 239

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPM--SEIDRMAKLQGKEINEAKKII 302
           +WL+ EMT+PY F+Q+W N+DD DV  + + L+       E       +  +   A++ +
Sbjct: 240 VWLDPEMTTPYAFYQFWLNVDDRDVSRYLRILSFRSREELEELEKLTEERPQARNAQRAL 299

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQ------HMPTISISKDEVSRGMGLLTLI 356
           A E+TT+VHG E+      A+   F     ++            +    V+    L+ L+
Sbjct: 300 AEELTTLVHGGEQCAAVIAASKALFGQGDLAELDEATLSAALSEVPHATVAELGPLVDLL 359

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V+ G A S + ARR +K     +NN  + + ++     +      + L  GKKN     +
Sbjct: 360 VEVGLAPSKSGARRTVKEGGAYVNNVKVVDGEVAPDAGELLHGRWLVLRRGKKNLAAVEV 419

Query: 417 C 417
            
Sbjct: 420 S 420


>gi|298483303|ref|ZP_07001482.1| tyrosine--tRNA ligase [Bacteroides sp. D22]
 gi|295085907|emb|CBK67430.1| tyrosyl-tRNA synthetase [Bacteroides xylanisolvens XB1A]
 gi|298270620|gb|EFI12202.1| tyrosine--tRNA ligase [Bacteroides sp. D22]
          Length = 430

 Score =  488 bits (1256), Expect = e-136,   Method: Composition-based stats.
 Identities = 148/428 (34%), Positives = 224/428 (52%), Gaps = 22/428 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG +  I    E   L S+  VTAY+G D TA SLH GHL  +M+L   Q+ 
Sbjct: 2   NFVEELRWRGMLQDIMPGTE--ELLSKEQVTAYLGIDPTADSLHIGHLCGVMILRHFQRC 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG-KTDALM 125
           GHKP++L+GG T +IGDPS +   R ++  + ++ N   IK   + F+ + +     A +
Sbjct: 60  GHKPLALIGGATGMIGDPSGKSAERNLLNEETLRHNQACIKKQLAKFLDFESDVPNRAEL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQAYD 183
           +NN  W+    ++D  RE+G   +VN M++ +SV+ RL  E    LSF EF Y +LQ YD
Sbjct: 120 VNNYDWMKDFTFLDFAREVGKHITVNYMMAKDSVKRRLNGEARDGLSFTEFTYQLLQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ L +   C+LQMGGSDQWGNI  G +L  R    ++FALT PL+T A G K GKT SG
Sbjct: 180 FLHLYETKGCKLQMGGSDQWGNITTGAELIRRTNGGEVFALTCPLITKADGGKFGKTESG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKKI 301
            IWL+   TSPY F+Q+W N+ D+D   + K  T++   EI+ +         +   +K 
Sbjct: 240 NIWLDPRYTSPYKFYQFWLNVSDSDAERYIKIFTSIEKEEIEALIAEHQAAPHLRLLQKR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDEVS 347
           +A E+T MVH  E+   A  A+   F  +                 + +P   IS+D ++
Sbjct: 300 LAKEVTVMVHSEEDYNAAVDASNILFGNATSDALRKLDEDTLLAVFEGVPQFEISRDALA 359

Query: 348 RGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+  + L V  A    S  E R+ ++   + +N   ++     I   D      + +  
Sbjct: 360 EGVKAVDLFVDNAAVFASKGEMRKLVQGGGVSLNKEKLTAFDQVITTADLLDEKYLLVQR 419

Query: 407 GKKNHIIC 414
           GKKN+ + 
Sbjct: 420 GKKNYFLL 427


>gi|331083835|ref|ZP_08332944.1| tyrosyl-tRNA synthetase [Lachnospiraceae bacterium 6_1_63FAA]
 gi|330403260|gb|EGG82820.1| tyrosyl-tRNA synthetase [Lachnospiraceae bacterium 6_1_63FAA]
          Length = 406

 Score =  488 bits (1256), Expect = e-135,   Method: Composition-based stats.
 Identities = 178/410 (43%), Positives = 253/410 (61%), Gaps = 7/410 (1%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG I Q+++  E+  L + G  T YIG+D TA SLH GH   L L+  LQ  G
Sbjct: 3   IYDELVARGLIAQVTDEEEIRELINNGKATFYIGFDPTADSLHVGHFMALCLMKRLQMAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           +KPI+L+GGGT  IGDPS R + R MM  + IQ N +  K     FI +  GK  A+M+N
Sbjct: 63  NKPIALIGGGTGYIGDPSGRSDMRSMMTPEIIQHNCDCFKKQMERFIDFSEGK--AMMVN 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  + Y++LLRE+G  FSVNRML+ E  + R+  E+ LSFLEFNYMI+Q+YDF  L
Sbjct: 121 NADWLLDLNYVELLREVGPHFSVNRMLTAECYKQRM--EKGLSFLEFNYMIMQSYDFYML 178

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            + Y C +Q GG DQW N++ G +L  R       A+T  LL  + G KMGKT SGA+WL
Sbjct: 179 YQKYGCNMQFGGDDQWSNMLGGTELIRRKLGKNACAMTITLLLNSEGKKMGKTQSGAVWL 238

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           +   TSP++F+QYWRN+ DADV+   + LT LP+ +ID M K +G ++N+AK+I+A E+T
Sbjct: 239 DPNKTSPFDFYQYWRNVADADVLKCIRMLTFLPLEQIDEMDKWEGSQLNKAKEILAYELT 298

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTN 366
            +VHG+EEAEKA  AA   F    ++ +MP+  I + ++  G + L++L+ K+G A + +
Sbjct: 299 ALVHGKEEAEKAQEAARALFSSG-NAANMPSAKIEEADLVDGNIDLISLLHKSGLANTRS 357

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           EARR ++   + I+   +++ K  +  +     G I L  GKKN     L
Sbjct: 358 EARRAIEQGGVAIDGEKVTDIKHLVSGEKLQGDG-IVLKKGKKNFRKVTL 406


>gi|229105682|ref|ZP_04236313.1| Tyrosyl-tRNA synthetase [Bacillus cereus Rock3-28]
 gi|228677730|gb|EEL31976.1| Tyrosyl-tRNA synthetase [Bacillus cereus Rock3-28]
          Length = 419

 Score =  488 bits (1256), Expect = e-135,   Method: Composition-based stats.
 Identities = 147/424 (34%), Positives = 220/424 (51%), Gaps = 21/424 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG ++Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  
Sbjct: 2   NIIDELEWRGAVNQQTDEEGLRKLVEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P+ L+GG T  IGDPS R   R++   + +Q N++ +         +G G ++  M+
Sbjct: 62  GHHPVILIGGATGTIGDPSGRQSERQLQTLEVVQHNVDALTAQMKKLFDFG-GNSEVKMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I  I+ LR+ G  FS+N ML+ + V SRL  +  +SF EF Y ILQA DF  
Sbjct: 121 NNYDWTHEINIIEFLRDYGKNFSINSMLAKDIVASRL--DTGISFTEFTYQILQAMDFHH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKLFALTSPLLTTASGTKMGKTLSGA 244
           L    D +LQ+GGSDQWGNI  G+DL  +L+    K+F LT PLL  + GTK GK+  GA
Sbjct: 179 LYTKEDVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSAGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKII 302
           +WL+ E T+P+ F+Q+W N DD DV+ + K  T L    ID +A     E    EA+K++
Sbjct: 239 VWLDAEKTTPFEFYQFWVNTDDRDVIKYLKYFTFLAKERIDELATKVEAEPHKREAQKVL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGL 352
             E+T  VHG E   +A       F   I S          + MPT   SK+       +
Sbjct: 299 GEEMTKFVHGEEALLQAVKITSALFSGDIKSLTADEIEQGFKEMPTFQSSKET----KNI 354

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           +  +V  G   S  +AR  + + AI +N   +++    + +++      I +  GKKN+ 
Sbjct: 355 VEWLVDLGIEPSRRQAREDINNGAISMNGEKVTDVGTDVTVENSFDGKFIIIRKGKKNYS 414

Query: 413 ICHL 416
           +  L
Sbjct: 415 LVKL 418


>gi|121634247|ref|YP_974492.1| tyrosyl-tRNA synthetase [Neisseria meningitidis FAM18]
 gi|189083663|sp|A1KS60|SYY_NEIMF RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|120865953|emb|CAM09690.1| putative tyrosyl-tRNA synthetase [Neisseria meningitidis FAM18]
 gi|308389938|gb|ADO32258.1| putative tyrosyl-tRNA synthetase [Neisseria meningitidis alpha710]
 gi|325131483|gb|EGC54190.1| tyrosyl-tRNA synthetase [Neisseria meningitidis M6190]
 gi|325137529|gb|EGC60111.1| tyrosyl-tRNA synthetase [Neisseria meningitidis ES14902]
          Length = 431

 Score =  487 bits (1255), Expect = e-135,   Method: Composition-based stats.
 Identities = 157/427 (36%), Positives = 228/427 (53%), Gaps = 21/427 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            +  L  RG I Q ++   LD L ++  ++ Y G+D TA SLH GHL  ++ L   Q+ G
Sbjct: 3   VIQDLQSRGLIAQTTDIEALDALLNEQKISLYCGFDPTADSLHIGHLLPVLALRRFQQAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H PI+L+GG T +IGDPSF+   R +  ++ +   +E I+   + F+ +  G   A+M N
Sbjct: 63  HTPIALVGGATGMIGDPSFKAAERSLNSAETVAGWVESIRSQLTPFLSF-EGGNAAIMAN 121

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDFVE 186
           N  W   +  +D LR+IG  FSVN ML+ ESV+ R+ R    +SF EF Y +LQ YDF E
Sbjct: 122 NADWFGKMNCLDFLRDIGKHFSVNAMLNKESVKQRIDRDGAGISFTEFAYSLLQGYDFAE 181

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L K +   L++GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  GA+W
Sbjct: 182 LNKRHGAVLEIGGSDQWGNITAGIDLTRRLYQKQVFGLTLPLVTKSDGTKFGKTEGGAVW 241

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINEAKKIIAT 304
           LN + TSPY F+Q+W  + DADV  F K  T L + EID +           EA++I+A 
Sbjct: 242 LNAKKTSPYQFYQFWLKVADADVYKFLKYFTFLSIEEIDAIEAKDKASGSKPEAQRILAE 301

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTLIVK 358
           E+T ++HG E    A   +   F     S      + +    +   EVS G+ ++  +VK
Sbjct: 302 EMTRLIHGEEALAAAQRISESLFAEDQSSLTESDFEQLALDGLPAFEVSDGINVVEALVK 361

Query: 359 AGFATSTNEARRHLKSNAIKINNSIIS-----------NEKLQIKLQDFDSTGNIKLSFG 407
            G A+S  EAR  + S A+ +N                ++   +  +         L  G
Sbjct: 362 TGLASSNKEARGFVNSKAVLLNGKPAEANNPNHAAERPDDACLLNGEHKRFGKYTILRRG 421

Query: 408 KKNHIIC 414
           K+NH + 
Sbjct: 422 KRNHALL 428


>gi|189460189|ref|ZP_03008974.1| hypothetical protein BACCOP_00826 [Bacteroides coprocola DSM 17136]
 gi|189433050|gb|EDV02035.1| hypothetical protein BACCOP_00826 [Bacteroides coprocola DSM 17136]
          Length = 430

 Score =  487 bits (1255), Expect = e-135,   Method: Composition-based stats.
 Identities = 147/428 (34%), Positives = 225/428 (52%), Gaps = 22/428 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG +H +    E   L  + +VTAY+G D TA SLH GHL  +M+L   Q+ 
Sbjct: 2   NFVEELRWRGMVHTMMPGTE--ELLEKEMVTAYLGIDPTADSLHIGHLCGVMMLRHFQRC 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG-TGKTDALM 125
           GHKP++L+GG T +IGDPS + + R ++  + ++ N E IK     F+ +       A +
Sbjct: 60  GHKPLALVGGATGMIGDPSGKSQERNLLDEETLRHNQECIKKQLGKFLDFESDAPNRAEL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQAYD 183
           +NN  W+    ++D  R +G   +VN M++ +SV+ RL  E    LSF EF Y +LQ YD
Sbjct: 120 VNNYDWMKDFSFLDFARTVGKHITVNYMMAKDSVQKRLNGEARDGLSFTEFTYQLLQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ L +  +C+LQ+GGSDQWGNI  G +L  R    ++FALT PL+T A G K GKT SG
Sbjct: 180 FLHLYETKNCKLQLGGSDQWGNITTGAELIRRTNGGEVFALTCPLITKADGGKFGKTESG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKKI 301
            IWL+   TSPY F+Q+W N+ D D   + K  T+LP  EID +         +   +K 
Sbjct: 240 NIWLDPRYTSPYKFYQFWLNVSDEDAKRYIKIFTSLPKEEIDALIAEHEPAPHLRVLQKR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDEVS 347
           +A E+T MVH   + E A  A+   F  +                 + +P   +SK ++ 
Sbjct: 300 LAKEVTIMVHSEADYEAAVEASGILFGNATSEALKKLDEDTLLSVFEGVPQFEVSKTDIE 359

Query: 348 RGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+  + L  + A    S  E R+ ++   + +N   ++    +I   D      + +  
Sbjct: 360 AGIKAVDLFTEKAAVFASKGEMRKLVQGGGVSLNKEKLTAFDQEITTADLLDEKYLLVQR 419

Query: 407 GKKNHIIC 414
           GKKN+ + 
Sbjct: 420 GKKNYYLL 427


>gi|209558661|ref|YP_002285133.1| tyrosyl-tRNA synthetase [Streptococcus pyogenes NZ131]
 gi|254783645|sp|B5XJ70|SYY_STRPZ RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|209539862|gb|ACI60438.1| Tyrosyl-tRNA synthetase [Streptococcus pyogenes NZ131]
          Length = 418

 Score =  487 bits (1255), Expect = e-135,   Method: Composition-based stats.
 Identities = 144/424 (33%), Positives = 228/424 (53%), Gaps = 25/424 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L  RG + Q ++ + L    ++G V+ Y GYD TA SLH GHL  ++    LQ  
Sbjct: 2   NIFEELKTRGLVFQTTDEQALVKALTEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP +L+GG T +IGDPSF+D  R +   + + E  +KIKG  S+F+ +  G   A ++
Sbjct: 62  GHKPYALVGGATGLIGDPSFKDAERSLQTKETVLEWSDKIKGQLSTFLDFENGDNKAELV 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I +ID LR++G +F+VN M+S +SV+ R+  E  +S+ EF Y I+Q YDF E
Sbjct: 122 NNYDWFSQISFIDFLRDVGKYFTVNYMMSKDSVKKRI--ETGISYTEFAYQIMQGYDFYE 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L   ++  LQ+GGSDQWGN+  G +L  +        +T PL+T ++G K GK+   A+W
Sbjct: 180 LNDKHNVTLQIGGSDQWGNMTAGTELLRKKADKTGHVMTVPLITDSTGKKFGKSEGNAVW 239

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIAT 304
           L+ + TSPY  +Q+W N+ D D V F K  T L + EI  +        +E  A+K +A 
Sbjct: 240 LDADKTSPYEMYQFWLNVMDDDAVRFLKIFTFLSLDEIAEIETQFNAARHERLAQKTLAR 299

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGM-------------- 350
           E+ T+VHG E  ++A     + F  +I +       +S +E+ +G+              
Sbjct: 300 EVVTLVHGEEAYKQALNITEQLFAGNIKN-------LSANELKQGLSNVPNYHVQSIDNH 352

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            ++ ++V A  + S  +AR  +++ AI IN   + +   Q+   D        +  GKK 
Sbjct: 353 NIVEILVAAKISPSKRQAREDVQNGAIYINGDRVQDLDYQLSNDDKIDDQLTVIRRGKKK 412

Query: 411 HIIC 414
           + + 
Sbjct: 413 YAVL 416


>gi|116670073|ref|YP_831006.1| tyrosyl-tRNA synthetase [Arthrobacter sp. FB24]
 gi|116610182|gb|ABK02906.1| tyrosyl-tRNA synthetase [Arthrobacter sp. FB24]
          Length = 437

 Score =  487 bits (1255), Expect = e-135,   Method: Composition-based stats.
 Identities = 147/425 (34%), Positives = 226/425 (53%), Gaps = 12/425 (2%)

Query: 2   PAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
           P F ++    L+ RG +H  ++  EL+ L +   +T Y G+D TA SLH G+L QL+L+ 
Sbjct: 14  PTF-ANIWQELNWRGLVHVSTDEVELEKLLAGDPITYYCGFDPTAPSLHLGNLVQLLLMR 72

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKT 121
            LQ  GHKP+ L+GG T +IGDP      R +     + E +  ++     F+ +  G  
Sbjct: 73  RLQLAGHKPLGLVGGSTGLIGDPRP-TAERTLNTKDTVSEWVGYLQAQVRRFLSF-DGDN 130

Query: 122 DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA 181
            A M+NN  W   +  ID LREIG  F V  ML  ++V SRL  ++ +S+ EF+Y ILQ 
Sbjct: 131 AARMVNNLDWTAPLSAIDFLREIGKHFRVGTMLRKDAVASRLSSDEGISYTEFSYQILQG 190

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            D+++L ++Y C L+ GGSDQWGN+  G +L  +++   + AL +PL+T + GTK GK+ 
Sbjct: 191 MDYLQLFRDYGCVLETGGSDQWGNLTSGTELIRKVEGKHVHALGTPLITNSDGTKFGKSE 250

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAK 299
             AIWL+ EM SPY F+Q+W N  DADV +  K  T L  +EI+ +     +     E +
Sbjct: 251 GNAIWLDPEMCSPYAFYQFWLNTADADVAARLKVFTFLTRAEIEALEVSIAERPFAREGQ 310

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQ------HMPTISISKDEV-SRGMGL 352
           + +A E+T++VHG E  EK   A+   F     +          T  +    V   G G+
Sbjct: 311 RRLAFEVTSLVHGVEATEKVIAASAALFGGGDLAALDEQTLSAATAELPSVRVDPDGTGI 370

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           + L+V +G A S + ARR +      +NN+ +++    I   +      + L  GKKN  
Sbjct: 371 VDLLVASGLADSKSAARRTVGEGGAYVNNTKVTDPDAVIPGSELLHGRYLLLRRGKKNLA 430

Query: 413 ICHLC 417
              + 
Sbjct: 431 TVEVA 435


>gi|294011411|ref|YP_003544871.1| tyrosyl-tRNA synthetase [Sphingobium japonicum UT26S]
 gi|292674741|dbj|BAI96259.1| tyrosyl-tRNA synthetase [Sphingobium japonicum UT26S]
          Length = 405

 Score =  487 bits (1255), Expect = e-135,   Method: Composition-based stats.
 Identities = 210/414 (50%), Positives = 279/414 (67%), Gaps = 11/414 (2%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M ++ SD L +L  RG+IHQ+++   LD L +  VV  YIG+D TA SLH GHL  +M+L
Sbjct: 1   MTSYSSDLLRLLDARGYIHQLTDAEGLDALAAGQVVPGYIGFDPTAPSLHVGHLVSIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             LQK GHKPI LMGGGT  IGDPSF+DE+R+++ +  I +N+  IK +F  F+ +G G 
Sbjct: 61  RQLQKAGHKPIVLMGGGTGKIGDPSFKDEARKLLTTDAIAQNVASIKRVFERFLTFGDGP 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           TDA+ML+N  WL  ++YI  LR+IG  FSVNRMLSF+SV+ RL REQSLSFLEFNYMILQ
Sbjct: 121 TDAIMLDNAEWLDRLEYIPFLRDIGQHFSVNRMLSFDSVKLRLDREQSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDF+EL++   CRLQMGGSDQWGNI+ G++L  R+   ++F LT+PLLT A GTKMGKT
Sbjct: 181 AYDFLELSRRSACRLQMGGSDQWGNIVNGVELTRRVDGTQVFGLTTPLLTNADGTKMGKT 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           + GA+WLN++  S Y++WQ+WRN  DADV +  +  T LPM E++R+A LQG EINEAKK
Sbjct: 241 VGGAVWLNEDQLSSYDYWQFWRNTADADVANRLRLFTDLPMDEVERLAALQGAEINEAKK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+A E T +  G + A  AA  A   F+      ++PT S+     + G+ ++      G
Sbjct: 301 ILANEATALCRGADAAAAAAETARRTFEEGASDANLPTASLG----AEGLNIVQGTTALG 356

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           FA S  E RR L   AI++N  ++S+  L +K  D       KLSFG K H + 
Sbjct: 357 FAASNKEVRRKLAEGAIRVNGEVVSDPALPLKAGD-------KLSFGAKKHGLI 403


>gi|310657576|ref|YP_003935297.1| tyrosyl-tRNA synthetase 1 (tyrosine--tRNA ligase 1) (tyrrs 1)
           [Clostridium sticklandii DSM 519]
 gi|308824354|emb|CBH20392.1| Tyrosyl-tRNA synthetase 1 (Tyrosine--tRNA ligase 1) (TyrRS 1)
           [Clostridium sticklandii]
          Length = 408

 Score =  487 bits (1255), Expect = e-135,   Method: Composition-based stats.
 Identities = 175/409 (42%), Positives = 251/409 (61%), Gaps = 5/409 (1%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +   +L ERGFI Q ++  E+  L  +  V  Y GYD TA SLH GH  Q + +  LQ  
Sbjct: 3   NVFDVLKERGFIAQATHEDEIRELLGKEKVVFYTGYDPTADSLHVGHFLQAVAMRHLQLA 62

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH PI L+GGGT++IGDPS R + R+M+  + I+EN E+ K     FI +     +A+M 
Sbjct: 63  GHTPIVLIGGGTTMIGDPSGRTDMRQMITPETIKENGERFKAQLGRFIDF--TADNAIMA 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL +++YI  LREIG  FSVNRML+ E  +SR+  E+ LSFLEFNYMI+QAYDF+E
Sbjct: 121 NNADWLMNLEYIPFLREIGMHFSVNRMLTAECFKSRM--EKGLSFLEFNYMIMQAYDFLE 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + + C +Q+GG DQW NII G DL  R +  + + +T  LLTT+ G KMGKT++GA+W
Sbjct: 179 LNRRHGCVMQLGGDDQWSNIIAGTDLIRRKEGKQAYGMTFNLLTTSDGKKMGKTMAGAVW 238

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           L++E T+PY F+QYWRNI+DA V      LT LPM E+ R+  L+G EIN AK+++A E+
Sbjct: 239 LDREKTTPYEFFQYWRNIEDASVEKCLALLTFLPMDEVRRLGTLEGSEINHAKEVLAYEV 298

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
           T +VH +E+A+ A  AA   F  +  S + PT       +  G+ +L ++ + G   S++
Sbjct: 299 TKLVHSKEDADAAMEAARALFTNNNASANAPTTGFELARLESGIAILDVLKETGLVPSSS 358

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           EARR +    I +N+  +      +   D  + G + +  GKK +    
Sbjct: 359 EARRLISQGGISVNDIKVEAIDFNVTA-DMLNDGVLMIKKGKKTYHQVK 406


>gi|15677671|ref|NP_274832.1| tyrosyl-tRNA synthetase [Neisseria meningitidis MC58]
 gi|81784231|sp|Q9JXY5|SYY_NEIMB RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|7227090|gb|AAF42170.1| tyrosyl-tRNA synthetase [Neisseria meningitidis MC58]
 gi|316984445|gb|EFV63418.1| tyrosyl-tRNA synthetase [Neisseria meningitidis H44/76]
 gi|325139655|gb|EGC62194.1| tyrosyl-tRNA synthetase [Neisseria meningitidis CU385]
 gi|325200896|gb|ADY96351.1| tyrosyl-tRNA synthetase [Neisseria meningitidis H44/76]
          Length = 431

 Score =  487 bits (1255), Expect = e-135,   Method: Composition-based stats.
 Identities = 158/427 (37%), Positives = 228/427 (53%), Gaps = 21/427 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            +  L  RG I Q ++   LD L ++  +  Y G+D TA SLH GHL  ++ L   Q+ G
Sbjct: 3   VIQDLQSRGLIAQTTDIEALDALLNEQKIALYCGFDPTADSLHIGHLLPVLALRRFQQAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H PI+L+GG T +IGDPSF+   R +  ++ +   +E I+   + F+ +  G   A+M N
Sbjct: 63  HTPIALVGGATGMIGDPSFKAAERSLNSAETVAGWVESIRNQLTPFLSF-EGGNAAIMAN 121

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDFVE 186
           N  W  S+  +D LR+IG  FSVN ML+ ESV+ R+ R    +SF EF Y +LQ YDF E
Sbjct: 122 NADWFGSMNCLDFLRDIGKHFSVNAMLNKESVKQRIDRDGAGISFTEFAYSLLQGYDFAE 181

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L K +   L++GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  GA+W
Sbjct: 182 LNKRHGAVLEIGGSDQWGNITAGIDLTRRLHQKQVFGLTLPLVTKSDGTKFGKTEGGAVW 241

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINEAKKIIAT 304
           LN + TSPY F+Q+W  + DADV  F K  T L + EID +           EA++I+A 
Sbjct: 242 LNAKKTSPYQFYQFWLKVADADVYKFLKYFTFLSIEEIDAIEAKDKASGSKPEAQRILAE 301

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTLIVK 358
           E+T ++HG E    A   +   F     S      + +    +   EVS G+ ++  +VK
Sbjct: 302 EMTRLIHGEEALAAAQRISESLFAEDQSSLTESDFEQLALDGLPAFEVSDGINVVEALVK 361

Query: 359 AGFATSTNEARRHLKSNAIKINNSIIS-----------NEKLQIKLQDFDSTGNIKLSFG 407
            G A+S  EAR  + S A+ +N                ++   +  +         L  G
Sbjct: 362 TGLASSNKEARGFVNSKAVLLNGKPAEANNPNHAAERPDDACLLNGEHKRFGKYTILRRG 421

Query: 408 KKNHIIC 414
           K+NH + 
Sbjct: 422 KRNHALL 428


>gi|311740481|ref|ZP_07714308.1| tyrosine--tRNA ligase [Corynebacterium pseudogenitalium ATCC 33035]
 gi|311304001|gb|EFQ80077.1| tyrosine--tRNA ligase [Corynebacterium pseudogenitalium ATCC 33035]
          Length = 419

 Score =  487 bits (1255), Expect = e-135,   Method: Composition-based stats.
 Identities = 149/422 (35%), Positives = 227/422 (53%), Gaps = 15/422 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG I+Q ++   L   C +  +  Y G+D T  SLHAGHL  L++L   Q  
Sbjct: 2   NIIDELQWRGLINQSTDLEALREAC-ENPIALYCGFDPTGDSLHAGHLVPLIMLRRFQNA 60

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH PI+L GG T  IGDP    E R M+  +++  N+E IKG    FI +  G+  A M+
Sbjct: 61  GHHPIALAGGATGFIGDPRDVGE-RSMLSEEDLAHNLEAIKGQLRRFIDF-DGEQAATMV 118

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W  ++  ID LR++G  FS+N ML  ++V+ RL+    +S+ EF+YM+LQ+ DFV+
Sbjct: 119 NNADWTMNMSVIDFLRDVGKNFSLNTMLDRDTVKRRLE-GDGISYTEFSYMLLQSNDFVQ 177

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA-I 245
           L +  DC LQ+GG DQWGNI+ G+DL  R+   K+  LT PL+T ASG K GK+  G  +
Sbjct: 178 LRRERDCVLQIGGGDQWGNIVSGVDLNRRIDGAKVHGLTVPLVTDASGQKFGKSTGGGKL 237

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIA 303
           WL+ E TS Y+++QY+ N  D+ V+ + +  T L   EI    +   +E     A++ +A
Sbjct: 238 WLDPEKTSAYSWYQYFLNAGDSVVIDYLRWFTFLTQEEIAEYERAVEEEPYKRAAQRRLA 297

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQ--------HMPTISISKDEVSRGMGLLTL 355
            E+T +VHG E  +    AA   F  +  S+         +   ++++        ++ L
Sbjct: 298 QEMTDLVHGEEATKAVELAAQALFGKAELSELDEKTLAGALSETTVAEVAAGEPRTIVDL 357

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +V +G A S   ARR +K     +NN  I + + +   +D      + L  GKKN     
Sbjct: 358 LVASGLADSKGAARRTIKEGGAYVNNQRIESAEWEPSAEDLLHGSWLVLRRGKKNFAGAK 417

Query: 416 LC 417
           L 
Sbjct: 418 LS 419


>gi|161869380|ref|YP_001598547.1| tyrosyl-tRNA synthetase [Neisseria meningitidis 053442]
 gi|189083662|sp|A9M1J5|SYY_NEIM0 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|161594933|gb|ABX72593.1| tyrosyl-tRNA synthetase [Neisseria meningitidis 053442]
          Length = 431

 Score =  487 bits (1255), Expect = e-135,   Method: Composition-based stats.
 Identities = 157/427 (36%), Positives = 226/427 (52%), Gaps = 21/427 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            +  L  R  I Q ++   LD L ++  +  Y G+D TA SLH GHL  ++ L   Q+ G
Sbjct: 3   VIQDLQSRDLIAQTTDIEALDALLNEQKIALYCGFDPTADSLHIGHLLPVLALRRFQQAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H PI+L+GG T +IGDPSF+   R +  ++ +   +E I+   + F+ +  G   A+M N
Sbjct: 63  HTPIALVGGATGMIGDPSFKAAERSLNSAETVAGWVESIRNQLTPFLSF-EGGNAAIMAN 121

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDFVE 186
           N  W   +  +D LR+IG  FSVN ML+ ESV+ R+ R    +SF EF Y +LQ YDF E
Sbjct: 122 NADWFGKMNCLDFLRDIGKHFSVNAMLNKESVKQRIDRDGAGISFTEFAYSLLQGYDFAE 181

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L K Y   L++GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  GA+W
Sbjct: 182 LNKRYGAVLEIGGSDQWGNITAGIDLTRRLNQKQVFGLTLPLVTKSDGTKFGKTEGGAVW 241

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINEAKKIIAT 304
           LN + TSPY F+Q+W  + DADV  F K  T L + EID +           EA++I+A 
Sbjct: 242 LNAKKTSPYQFYQFWLKVADADVYKFLKYFTFLSIEEIDAVEAKDQASGSKPEAQRILAE 301

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTLIVK 358
           E+T ++HG E    A   +   F     S      + +    +   EVS G+ ++  +VK
Sbjct: 302 EMTRLIHGEEALAAAQRISESLFAEDQSSLTESDFEQLALDGLPAFEVSDGINVVEALVK 361

Query: 359 AGFATSTNEARRHLKSNAIKINNSIIS-----------NEKLQIKLQDFDSTGNIKLSFG 407
            G A+S  EAR  + S A+ +N                ++   +  +         L  G
Sbjct: 362 TGLASSNKEARGFVNSKAVLLNGKPAEANNPNHAAERPDDACLLTDEHKRFGKYTILRRG 421

Query: 408 KKNHIIC 414
           K+NH + 
Sbjct: 422 KRNHALL 428


>gi|300744032|ref|ZP_07073052.1| tyrosine--tRNA ligase [Rothia dentocariosa M567]
 gi|300380393|gb|EFJ76956.1| tyrosine--tRNA ligase [Rothia dentocariosa M567]
          Length = 434

 Score =  487 bits (1255), Expect = e-135,   Method: Composition-based stats.
 Identities = 149/424 (35%), Positives = 223/424 (52%), Gaps = 19/424 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L  RG +H  ++   L+   S   +T Y GYD TA+SLH GHL QL+++  LQ  
Sbjct: 17  NIWQELKWRGLVHVSTDEEALEKALSDEKLTFYTGYDPTAASLHLGHLVQLLVMRRLQLA 76

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P+ L+GG T +IGDP  +   R +   + + + ++ ++     F+ +  G+  A M+
Sbjct: 77  GHYPLGLVGGFTGLIGDPR-QTSERVLNSREVVADWVQSLRSQIERFLSF-EGENAARMV 134

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   +  ID LR+IG  F V  M+  E V  RL  E+ +S+ EF+Y ILQ  D++E
Sbjct: 135 NNLDWGGQLSAIDFLRDIGKHFRVGTMVKKEIVAKRLNSEEGISYTEFSYQILQGLDYLE 194

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + Y C LQ GGSDQWGN+  G +L  +++   + A+ +PL+T + GTK GK+   AIW
Sbjct: 195 LNRQYGCTLQTGGSDQWGNLTSGTELIRKVEGKTVHAIGTPLITNSDGTKFGKSEGNAIW 254

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE--INEAKKIIAT 304
           LN EM SPY F+Q+W N  DADV+   K  T L  +EI         E    EA+K++A 
Sbjct: 255 LNPEMCSPYAFYQFWLNTADADVIDRLKVFTFLTRAEIGEYEHKVETEAYKREAQKLLAY 314

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHS-----------QHMPTISISKDEVSRGMGLL 353
           E+T +VHG E  E+A  A+   F     +             +P++ +S D +     L+
Sbjct: 315 EVTALVHGVEPTEQAIAASEALFGKGDFASLDESTLQAVMDELPSVELSSDRL----DLI 370

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
           T + + GFA+S +EARR LK     +N   +  E   I  +         +  GKKN   
Sbjct: 371 TALTELGFASSKSEARRILKEGGASVNGVKVQGEDALISSEQLLHGKYAIVRRGKKNQGA 430

Query: 414 CHLC 417
             + 
Sbjct: 431 ITVV 434


>gi|225376594|ref|ZP_03753815.1| hypothetical protein ROSEINA2194_02236 [Roseburia inulinivorans DSM
           16841]
 gi|225211477|gb|EEG93831.1| hypothetical protein ROSEINA2194_02236 [Roseburia inulinivorans DSM
           16841]
          Length = 408

 Score =  487 bits (1254), Expect = e-135,   Method: Composition-based stats.
 Identities = 175/401 (43%), Positives = 252/401 (62%), Gaps = 6/401 (1%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG I Q+++  E+  L + G  T YIG+D TA SLH GH   L L+  LQ  G
Sbjct: 3   LYDELVARGLIAQVTDEEEIKDLINNGKATFYIGFDPTADSLHVGHFMALCLMKRLQMAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           +KPI+L+GGGT++IGDPS R + R+MM  + IQ N +  K   S FI +  GK  ALM+N
Sbjct: 63  NKPIALIGGGTAMIGDPSGRTDMRQMMTPETIQHNCDCFKKQMSRFIDFSEGK--ALMVN 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  + YID+LRE+G+ FSVNRML+ E  + R+  E+ LSFLEFNYMI+Q+YDF  L
Sbjct: 121 NADWLMDLNYIDVLREVGAHFSVNRMLTAECYKQRM--EKGLSFLEFNYMIMQSYDFYTL 178

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            + Y C ++ GG DQW N++ G +L  R      +A+T  LL  + G KMGKT SGA+WL
Sbjct: 179 YQKYGCNMEFGGDDQWSNMLGGTELIRRKLGKDAYAMTINLLLNSEGKKMGKTQSGAVWL 238

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           + E TSP++F+QYWRN+ D+DV+   + LT LP+ EID M   +G ++N+AK+I+A E+T
Sbjct: 239 DPEKTSPFDFFQYWRNVADSDVLKCIRMLTFLPLEEIDAMESWEGAQLNQAKEILAFELT 298

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTN 366
            +VHG EEA KA  A+   F     S HMPT+ +S  + + G M +L+L+VK   A S +
Sbjct: 299 KLVHGEEEAAKAREASHALFAGGGDSAHMPTVELSSADFADGDMDILSLLVKTELAPSRS 358

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFG 407
           +ARR ++   + + +  +++ +       F + G + +  G
Sbjct: 359 DARRAVEQGGVSVADEKVTDIRTAYNADSFGADG-LVVKRG 398


>gi|260061604|ref|YP_003194684.1| tyrosyl-tRNA synthetase [Robiginitalea biformata HTCC2501]
 gi|88785736|gb|EAR16905.1| tyrosyl-tRNA synthetase [Robiginitalea biformata HTCC2501]
          Length = 433

 Score =  487 bits (1254), Expect = e-135,   Method: Composition-based stats.
 Identities = 155/429 (36%), Positives = 231/429 (53%), Gaps = 23/429 (5%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           ++F+  L  RG +H +    E       G+  AY+G D TA SLH GHL  +M+L   Q 
Sbjct: 3   TNFVKELEWRGMLHDVMPGTE--EHLLSGMQAAYVGIDPTADSLHIGHLVGVMMLRHFQM 60

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG-TGKTDAL 124
            GHKPI L+GG T +IGDPS +   R ++    ++ N E IK   S F+ +    +  A+
Sbjct: 61  AGHKPIGLVGGATGMIGDPSGKSAERNLLDETTLRMNQEAIKMQLSRFLDFESDAENAAV 120

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL--KREQSLSFLEFNYMILQAY 182
           ++NN  W+  I ++D +R++G   +VN M++ +SV+ R+  +  + +SF EF Y ++Q Y
Sbjct: 121 LVNNYDWMKDITFLDFIRDVGKHITVNYMMAKDSVKKRVSDESGEGMSFTEFTYQLVQGY 180

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DF+ L + Y+C LQMGGSDQWGNI  G +L  R+   K +ALT PL+T A GTK GKT S
Sbjct: 181 DFLHLYRKYNCTLQMGGSDQWGNITTGTELIRRIDGGKGYALTCPLITKADGTKFGKTES 240

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKK 300
           G +WL+   TSPY F+QYW N  D D   + K  T L   EI+       +     E ++
Sbjct: 241 GNVWLDAHKTSPYKFYQYWLNTSDEDAEKYIKIFTFLSREEIEGLVAEHREAPHKRELQR 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDEV 346
            +A E+TTMVH R++ E A TA+   F  S                 + +P   +   ++
Sbjct: 301 RLAEELTTMVHSRQDLENAVTASSILFGKSTAESLRSLGEETFMEVFEGVPQCHLPIGDI 360

Query: 347 SRGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLS 405
             G+ ++  +    GF  S  EA R LK NAI +N + + +    I  +D  S   + L 
Sbjct: 361 ESGLDMVAALSARTGFLKSNGEALRELKQNAISVNKAKVDD-SYTITEKDLISGKFVLLQ 419

Query: 406 FGKKNHIIC 414
            GKKN+ + 
Sbjct: 420 RGKKNYFVL 428


>gi|313669059|ref|YP_004049343.1| tyrosyl-tRNA synthetase [Neisseria lactamica ST-640]
 gi|313006521|emb|CBN87985.1| putative tyrosyl-tRNA synthetase [Neisseria lactamica 020-06]
          Length = 431

 Score =  487 bits (1254), Expect = e-135,   Method: Composition-based stats.
 Identities = 155/427 (36%), Positives = 225/427 (52%), Gaps = 21/427 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            +  L  RG I Q ++   LD L ++  +  Y G+D TA SLH GHL  ++ L   Q+ G
Sbjct: 3   VIQDLQSRGLIAQTTDIEALDALLNEQKIALYCGFDPTADSLHIGHLLPVLALRRFQQAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H PI+L+GG T +IGDPSF+   R +  ++ +   +E I+   + F+ +  G   A+M N
Sbjct: 63  HTPIALVGGATGMIGDPSFKAAERSLNSAETVAGWVESIRNQLTPFLSF-EGGNAAIMAN 121

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDFVE 186
           N  W   +  +D LR+IG  FSVN ML+ ESV+ R++R    +SF EF Y +LQ YDF E
Sbjct: 122 NADWFGKMNCLDFLRDIGKHFSVNAMLNKESVKQRIERDGAGISFTEFAYSLLQGYDFAE 181

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L K +   L++GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  GA+W
Sbjct: 182 LNKRHGAVLEIGGSDQWGNITAGIDLTRRLHQKQVFGLTLPLVTKSDGTKFGKTEGGAVW 241

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINEAKKIIAT 304
           LN + TSPY F+Q+W  + DADV  F K  T L + EID +           EA++I+A 
Sbjct: 242 LNAKKTSPYQFYQFWLKVADADVYKFLKYFTFLSVEEIDAVEAKDRASGSKPEAQRILAE 301

Query: 305 EITTMVHGREEAEKAATAAMECFDMSI------HSQHMPTISISKDEVSRGMGLLTLIVK 358
           E+T ++HG      A   +   F            + +    +   EVS G+ ++  +VK
Sbjct: 302 EMTRLIHGEAALAAAQRISESLFAEDQSRLTESDFEQLALDGLPAFEVSDGINVVEALVK 361

Query: 359 AGFATSTNEARRHLKSNAIKINNSIIS-----------NEKLQIKLQDFDSTGNIKLSFG 407
            G A S  EAR  + S A+ +N                ++   +  +         L  G
Sbjct: 362 TGLAASNKEARGFVNSKAVLLNGKPAEANNPNHAAERPDDACLLTEEHKRFGKYTILRRG 421

Query: 408 KKNHIIC 414
           K+NH + 
Sbjct: 422 KRNHALL 428


>gi|224023478|ref|ZP_03641844.1| hypothetical protein BACCOPRO_00180 [Bacteroides coprophilus DSM
           18228]
 gi|224016700|gb|EEF74712.1| hypothetical protein BACCOPRO_00180 [Bacteroides coprophilus DSM
           18228]
          Length = 430

 Score =  487 bits (1254), Expect = e-135,   Method: Composition-based stats.
 Identities = 147/428 (34%), Positives = 222/428 (51%), Gaps = 22/428 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG +H +    E   L  + +VTAY+G D TA SLH GHL  +M+L   Q+ 
Sbjct: 2   NFVEELRWRGMVHTMMPGTE--ELLEKEMVTAYLGIDPTADSLHIGHLCGVMMLRHFQRC 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG-TGKTDALM 125
           GHKP++L+GG T +IGDPS + + R ++  + ++ N E IK     F+ +       A +
Sbjct: 60  GHKPLALVGGATGMIGDPSGKSQERNLLDEETLRHNQECIKKQLGKFLDFESDAPNKAEL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQAYD 183
           +NN  W+    ++D  R +G   +VN M++ ESV+ RL  E    LSF EF Y +LQ YD
Sbjct: 120 VNNYDWMKDFSFLDFARTVGKHITVNYMMAKESVQKRLNGEARDGLSFTEFTYQLLQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ L +  +C+LQ+GGSDQWGNI  G +L  R    +++ALT PL+T A G K GKT SG
Sbjct: 180 FLHLYETKNCKLQLGGSDQWGNITTGAELIRRTNGGEVYALTCPLITKADGGKFGKTESG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKI 301
            IWL+   TSPY F+Q+W N+ D D   + K  T+L   EID       Q   +   +K 
Sbjct: 240 NIWLDPRYTSPYKFYQFWLNVSDEDAKRYIKIFTSLSKEEIDALTAEHEQAPHLRVLQKR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDEVS 347
           +A E+T MVH   +   A  A+   F  +                 + +P   +SK E+ 
Sbjct: 300 LAKEVTIMVHSEADYNAAVEASGILFGNATSDALKKLDEETLLSVFEGVPQFEVSKAEIE 359

Query: 348 RGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+  + L+ + A    S  E R+ ++   + +N   +      I   D      + +  
Sbjct: 360 AGIKAVDLLTEKAAVFPSKGEMRKLVQGGGVSLNKEKLGAFDQVITAADLLDKKYLLIQR 419

Query: 407 GKKNHIIC 414
           GKKN+ + 
Sbjct: 420 GKKNYYLL 427


>gi|311113284|ref|YP_003984506.1| tyrosine--tRNA ligase [Rothia dentocariosa ATCC 17931]
 gi|310944778|gb|ADP41072.1| tyrosine--tRNA ligase [Rothia dentocariosa ATCC 17931]
          Length = 434

 Score =  487 bits (1254), Expect = e-135,   Method: Composition-based stats.
 Identities = 149/424 (35%), Positives = 222/424 (52%), Gaps = 19/424 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L  RG +H  ++   L+   S   +T Y GYD TA+SLH GHL QL+++  LQ  
Sbjct: 17  NIWQELKWRGLVHVSTDEEALEKALSDEKLTFYTGYDPTAASLHLGHLVQLLVMRRLQLA 76

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P+ L+GG T +IGDP  +   R +   + + E ++ ++     F+ +  G+  A M+
Sbjct: 77  GHYPLGLVGGFTGLIGDPR-QTSERVLNSREVVAEWVQSLRSQIERFLSF-EGENAARMV 134

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   +  ID LR+IG  F V  M+  E V  RL  E+ +S+ EF+Y ILQ  D++E
Sbjct: 135 NNLDWGGQLSAIDFLRDIGKHFRVGTMVKKEIVAKRLNSEEGISYTEFSYQILQGLDYLE 194

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + Y C LQ GGSDQWGN+  G +L  +++   + A+ +PL+T + GTK GK+   AIW
Sbjct: 195 LNRQYGCTLQTGGSDQWGNLTSGTELIRKVEGKTVHAIGTPLITNSDGTKFGKSEGNAIW 254

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE--INEAKKIIAT 304
           LN EM SPY F+Q+W N  DADV+   K  T L  +EI         E    E +K +A 
Sbjct: 255 LNPEMCSPYAFYQFWLNTADADVIDRLKVFTFLTRAEIGEYEHKVEAEAYKRETQKRLAY 314

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHS-----------QHMPTISISKDEVSRGMGLL 353
           E+T +VHG E  E+A  A+   F     +             +P++ +S D +     L+
Sbjct: 315 EVTALVHGVEPTEQAIAASEALFGKGDFAALDESTLQAVMDELPSVELSSDRL----DLI 370

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
           T + + GFA+S +EARR LK     +N   +  E  +I  +         +  GKKN   
Sbjct: 371 TALTELGFASSKSEARRILKEGGASVNGVKVQGEDARISSEQLLHGKYAIVRRGKKNQGA 430

Query: 414 CHLC 417
             + 
Sbjct: 431 ITVV 434


>gi|261379949|ref|ZP_05984522.1| tyrosine--tRNA ligase [Neisseria subflava NJ9703]
 gi|284797147|gb|EFC52494.1| tyrosine--tRNA ligase [Neisseria subflava NJ9703]
          Length = 432

 Score =  487 bits (1254), Expect = e-135,   Method: Composition-based stats.
 Identities = 155/429 (36%), Positives = 229/429 (53%), Gaps = 21/429 (4%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
              +  L  RG I Q ++   LD L ++  ++ Y G+D TA SLH GHL  ++ L   Q+
Sbjct: 2   KSVIQDLQSRGLIAQTTDIEALDALLNEQKISLYCGFDPTADSLHIGHLLPVLALRRFQQ 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH PI+L+GG T +IGDPSF+   R +  ++ +   +E I+   + F+ +  G   A+M
Sbjct: 62  AGHTPIALVGGATGMIGDPSFKAAERSLNSAETVAGWVESIRNQLTPFLSF-DGDNAAIM 120

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYDF 184
            NN  W  S+  +D LR+IG  FSVN ML+ ESV+ R++R+   +SF EF Y +LQ YDF
Sbjct: 121 ANNADWFGSMNCLDFLRDIGKHFSVNAMLNKESVKQRIERDDVGISFTEFAYSLLQGYDF 180

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
            EL K +   L++GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  GA
Sbjct: 181 AELNKRHGAVLEIGGSDQWGNITAGIDLTRRLHQKQVFGLTLPLVTKSDGTKFGKTEGGA 240

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINEAKKII 302
           +WLN + TSPY F+Q+W  + DADV  F K  T L + EID +           EA++I+
Sbjct: 241 VWLNAKKTSPYQFYQFWLKVADADVYKFLKYFTFLSIEEIDAIEAKDKASGTKPEAQRIL 300

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSI------HSQHMPTISISKDEVSRGMGLLTLI 356
           A E+T ++HG E    A   +   F            + +    +   EVS  + ++  +
Sbjct: 301 AEEMTRLIHGEEALAAAQRISESLFAEDQSHLTESDFEQLALDGLPTFEVSESLNVVETL 360

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIIS-----------NEKLQIKLQDFDSTGNIKLS 405
           VK G A+S  EAR  + S A+ +N                ++   +  +         + 
Sbjct: 361 VKTGLASSNKEARGFVNSKAVLLNGKPAEANNPNHAAEKPDDAYMLTDEHKRFGKYTIVR 420

Query: 406 FGKKNHIIC 414
            GK+NH + 
Sbjct: 421 RGKRNHALL 429


>gi|261366954|ref|ZP_05979837.1| tyrosine--tRNA ligase [Subdoligranulum variabile DSM 15176]
 gi|282571072|gb|EFB76607.1| tyrosine--tRNA ligase [Subdoligranulum variabile DSM 15176]
          Length = 406

 Score =  487 bits (1254), Expect = e-135,   Method: Composition-based stats.
 Identities = 169/410 (41%), Positives = 250/410 (60%), Gaps = 7/410 (1%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG I Q+++  E+  L + G  T YIG+D TA SL AGH   L L+  LQ  G
Sbjct: 3   IYDELKARGLIAQVTDEEEIKELINNGKATFYIGFDCTADSLTAGHFMALTLMKRLQMAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           ++PI+L+GGGT++IGDPS R + R+M+  ++I  N E  K     F+++G GK  ALMLN
Sbjct: 63  NRPIALIGGGTTMIGDPSGRSDMRKMLTKEDIAHNAECFKRQMERFVEFGEGK--ALMLN 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL ++ Y++LLRE+G+ FSVN ML  E  + R+     LSFLEFNYMI+Q+YDF  +
Sbjct: 121 NADWLLNLNYVELLREVGACFSVNNMLRAECYKQRMVN--GLSFLEFNYMIMQSYDFYYM 178

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            ++Y C +Q GG DQW N++ G +L  R      +A+T  LLT + G KMGKT   A+WL
Sbjct: 179 FQHYGCNMQFGGDDQWSNMLGGTELIRRKLNKDAYAMTITLLTDSQGKKMGKTAGNAVWL 238

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           +   TSP++F+QYWRN+ DADV+   + LT LP+ +ID M   QG+++N+AK+I+A E+T
Sbjct: 239 DPNKTSPFDFYQYWRNVGDADVLKCIRMLTFLPLEQIDEMDHWQGEQLNQAKEILAYELT 298

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTN 366
            MVHG+ EAEKA   A   F  +   ++MP+  +    V  G +GLL  +V AG   S  
Sbjct: 299 KMVHGKAEAEKAQQTARGLFSGAADHENMPSTVLDASLVKDGAVGLLAAMVAAGLCGSNR 358

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           EAR+ ++   + ++    ++ K+ +  +   +   + +  GKK +    L
Sbjct: 359 EARQLVQQGGVLVDGEKANDPKMTLSEEALRAG--VVIKKGKKVYHKVML 406


>gi|306832581|ref|ZP_07465720.1| tyrosine--tRNA ligase [Streptococcus bovis ATCC 700338]
 gi|304425189|gb|EFM28316.1| tyrosine--tRNA ligase [Streptococcus bovis ATCC 700338]
          Length = 418

 Score =  487 bits (1253), Expect = e-135,   Method: Composition-based stats.
 Identities = 146/420 (34%), Positives = 225/420 (53%), Gaps = 17/420 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L ERG + Q ++   L    ++G V+ Y GYD TA SLH GHL  ++    LQ  
Sbjct: 2   NIFEELKERGLVFQTTDEEALVKALTEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP +L+GG T +IGDPSF+D  R +   + +   + KI+   S F+ +  G   A+M+
Sbjct: 62  GHKPYALVGGATGLIGDPSFKDAERSLQTKETVDGWVTKIQNQLSRFLDFENGDNKAVMV 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W  ++ +ID LR++G +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF E
Sbjct: 122 NNYDWFGNVSFIDFLRDVGKYFTVNAMMSKESVKKRI--ETGISYTEFAYQIMQGYDFYE 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L   Y+  LQ+GGSDQWGN+  G +L  R        +T PL+T ++G K GK+   A+W
Sbjct: 180 LNDKYNVTLQIGGSDQWGNMTAGTELLRRKADKTGHVMTVPLITDSTGKKFGKSEGNAVW 239

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIAT 304
           L+ E TSPY  +Q+W N+ D D V F K  T L + EI  + +      +E  A+KI+A 
Sbjct: 240 LDAEKTSPYEMYQFWLNVMDDDAVRFLKIFTFLSLEEIAEIEEEFNAARHERLAQKILAR 299

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLT 354
           E+ T+VHG    ++A     + F  +I S           ++P  ++  D       ++ 
Sbjct: 300 EVVTLVHGEAAYKQALKITEQLFAGNIKSLSAKELKQGLNNVPNYAVQAD---NNRNIVE 356

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           ++V A  + S  +AR  +++ AI IN   I +    +   D        +  GKK + + 
Sbjct: 357 ILVAAKISPSKRQAREDVQNGAIYINGERIQDLDYTLSDDDKIDNELTVIRRGKKKYFVL 416


>gi|255324652|ref|ZP_05365769.1| tyrosine--tRNA ligase [Corynebacterium tuberculostearicum SK141]
 gi|255298558|gb|EET77858.1| tyrosine--tRNA ligase [Corynebacterium tuberculostearicum SK141]
          Length = 419

 Score =  487 bits (1253), Expect = e-135,   Method: Composition-based stats.
 Identities = 149/422 (35%), Positives = 227/422 (53%), Gaps = 15/422 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG I+Q ++   L   C +  +  Y G+D T  SLHAGHL  L++L   Q  
Sbjct: 2   NIIDELQWRGLINQSTDLEALREAC-ENPIALYCGFDPTGDSLHAGHLVPLIMLRRFQNA 60

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH PI+L GG T  IGDP    E R M+  +++  N+E IKG    FI +  G+  A M+
Sbjct: 61  GHHPIALAGGATGFIGDPRDVGE-RSMLSEEDLAHNLEAIKGQLRRFIDF-DGEQAATMV 118

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W  ++  ID LR++G  FS+N ML  ++V+ RL+    +S+ EF+YM+LQ+ DFV+
Sbjct: 119 NNADWTMNMSVIDFLRDVGKNFSLNTMLDRDTVKRRLE-GDGISYTEFSYMLLQSNDFVQ 177

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA-I 245
           L +  DC LQ+GG DQWGNI+ G+DL  R+   K+  LT PL+T ASG K GK+  G  +
Sbjct: 178 LRRERDCVLQIGGGDQWGNIVSGVDLNRRIDGAKVHGLTVPLVTDASGQKFGKSTGGGKL 237

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIA 303
           WL+ E TS Y+++QY+ N  D+ V+ + +  T L   EI    +   +E     A++ +A
Sbjct: 238 WLDPEKTSAYSWYQYFLNAGDSVVIDYLRWFTFLTQEEIAEYERAVEEEPYKRAAQRRLA 297

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQ--------HMPTISISKDEVSRGMGLLTL 355
            E+T +VHG E  +    AA   F  +  S+         +   ++++        ++ L
Sbjct: 298 QEMTDLVHGEEATKAVELAAQALFGKAELSELDEKTLAGALSETTVAEIAAGEPRTIVDL 357

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +V +G A S   ARR +K     +NN  I + + +   +D      + L  GKKN     
Sbjct: 358 LVASGLADSKGAARRTIKEGGAYVNNQRIESAEWEPSAEDLLHGSWLVLRRGKKNFAGAK 417

Query: 416 LC 417
           L 
Sbjct: 418 LS 419


>gi|319409842|emb|CBY90151.1| tyrosyl-tRNA synthetase (tyrosine-tRNA ligase; TyrRS) [Neisseria
           meningitidis WUE 2594]
          Length = 431

 Score =  487 bits (1253), Expect = e-135,   Method: Composition-based stats.
 Identities = 156/427 (36%), Positives = 227/427 (53%), Gaps = 21/427 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            +  L  RG I Q ++   LD L ++  +  Y G+D TA SLH GHL  ++ L   Q+ G
Sbjct: 3   VIQDLQSRGLIAQTTDIEALDALLNEQKIALYCGFDPTADSLHIGHLLPVLALRRFQQAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H PI+L+GG T +IGDPSF+   R +  ++ +   +E I+   + F+ +  G   A+M N
Sbjct: 63  HTPIALVGGATGMIGDPSFKAAERSLNSAETVAGWVESIRNQLTPFLSF-EGGNAAIMAN 121

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDFVE 186
           N  W   +  +D LR+IG  FSVN ML+ ESV+ R+ R    +SF EF Y +LQ YDF E
Sbjct: 122 NADWFGKMNCLDFLRDIGKHFSVNAMLNKESVKQRIDRDGAGISFTEFAYSLLQGYDFAE 181

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L K +   L++GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  GA+W
Sbjct: 182 LNKRHGAVLEIGGSDQWGNITAGIDLTRRLHQKQVFGLTLPLVTKSDGTKFGKTEGGAVW 241

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINEAKKIIAT 304
           LN + TSPY F+Q+W  + DADV  F K  T L + EID +           EA++I+A 
Sbjct: 242 LNAKKTSPYQFYQFWLKVADADVYKFLKYFTFLSIEEIDAIEAKDKASGTKPEAQRILAE 301

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTLIVK 358
           E+T ++HG    + A   +   F     S      + +    +   EVS G+ ++  +VK
Sbjct: 302 EMTRLIHGEAALQAAQRISESLFAEDQSSLTESDFEQLALDGLPAFEVSDGINVVEALVK 361

Query: 359 AGFATSTNEARRHLKSNAIKINNSIIS-----------NEKLQIKLQDFDSTGNIKLSFG 407
            G A+S  EAR  + S A+ +N                ++   +  +         L  G
Sbjct: 362 TGLASSNKEARGFVNSKAVLLNGKPAEANNPNHAAERPDDACLLNGEHKRFGKYTILRRG 421

Query: 408 KKNHIIC 414
           K+NH + 
Sbjct: 422 KRNHALL 428


>gi|255083086|ref|XP_002504529.1| predicted protein [Micromonas sp. RCC299]
 gi|226519797|gb|ACO65787.1| predicted protein [Micromonas sp. RCC299]
          Length = 506

 Score =  487 bits (1253), Expect = e-135,   Method: Composition-based stats.
 Identities = 154/432 (35%), Positives = 238/432 (55%), Gaps = 20/432 (4%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           K+D + +L ERG +   +N  EL   C++G ++ Y G+D TA SLH G+L  +++L W Q
Sbjct: 76  KADVVDVLKERGLLDACTNEDELRKACAEGSLSVYCGFDPTADSLHLGNLLGIVVLAWFQ 135

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFI-----KYGTG 119
           + GH P++L+GG T  +GDPS +   R ++    I  N   IK I    +        T 
Sbjct: 136 RCGHTPVALLGGATGRVGDPSGKSAERPVLDDDTINANTAGIKAILERVLANGAADADTD 195

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
              A+++NN  W  S+ +++ LRE+G +  V  M++ +SV++RL  EQ +SF EF+Y +L
Sbjct: 196 VPPAVVMNNLDWFGSMGFLEFLREVGKYARVGTMMAKDSVKTRLDSEQGMSFTEFSYQLL 255

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK-LFALTSPLLTTASGTKMG 238
           Q YDF  L K +D R+Q+GGSDQWGNI  G DL  RL   +  + +T PLL  A G K G
Sbjct: 256 QGYDFCHLFKEHDVRVQVGGSDQWGNITAGTDLIRRLADKEGAWGVTFPLLLKADGRKFG 315

Query: 239 KTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK---LQGKEI 295
           K+  GA+WL+ E  SPY F+QY     DADVV F + LT +P++EI+ +       G   
Sbjct: 316 KSEDGAVWLSPERLSPYKFYQYMLQSTDADVVRFMRMLTFVPLAEIEAIEASMSADGYVP 375

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAM----------ECFDMSIHSQHMPTISISKDE 345
           N A+K +A E+T  VHG+E   +A  A            +   +   +  +PT  +++DE
Sbjct: 376 NTAQKRLAEEVTRFVHGKEGLTQALKATEGLKPGADTVLDAATLEALAGDIPTAELARDE 435

Query: 346 VSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLS 405
           V  G  ++ ++   G   S  EA+R +K    ++NN  + +E+  I   D      + L+
Sbjct: 436 VV-GKTVVDVMAATGLQKSKGEAKRMIKGGGARLNNVKVEDEEATIGEDDVIEGRVLLLA 494

Query: 406 FGKKNHIICHLC 417
            GKKN ++  + 
Sbjct: 495 AGKKNKLLVRVV 506


>gi|256379450|ref|YP_003103110.1| tyrosyl-tRNA synthetase [Actinosynnema mirum DSM 43827]
 gi|255923753|gb|ACU39264.1| tyrosyl-tRNA synthetase [Actinosynnema mirum DSM 43827]
          Length = 427

 Score =  487 bits (1253), Expect = e-135,   Method: Composition-based stats.
 Identities = 135/427 (31%), Positives = 233/427 (54%), Gaps = 13/427 (3%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M       L  L+ RG I Q ++   L      G +T Y G+D +A SLHAG+L  L++L
Sbjct: 1   MVRVSEHILDELTWRGLIAQSTDLDALREDLDSGPLTLYCGFDPSAPSLHAGNLVPLLML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+P+ L GG T +IGDP      R++     + E + +IKG    F+++  G 
Sbjct: 61  RRFQRAGHRPVILAGGATGMIGDPRD-TAERQLNPVDTVAEWVGRIKGQLERFVEFDDGP 119

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           T A+++NN  W   +  ++ LR++G  FSVN ML+ E+V+ RL  +  +SF EF+Y++LQ
Sbjct: 120 TGAIVVNNLDWTGPMPVLEFLRDVGKHFSVNVMLARETVKRRLASD-GMSFTEFSYLLLQ 178

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           ++D++ L +++   LQ+GGSDQWGN++ G+DL  +++   + A+T+PL+T + G K GK+
Sbjct: 179 SHDYLRLHRDHGVALQIGGSDQWGNLVGGVDLIRKVEGHAVHAMTAPLVTDSEGRKFGKS 238

Query: 241 -LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINE 297
              G +WL+  MTSPY ++QY+ N+ DA+V+ + +  + L   EI  + +       +  
Sbjct: 239 TGGGNVWLDPSMTSPYAWYQYFVNVGDAEVIHYLRLFSFLSREEIAELEEQTASAPHLRA 298

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQ-HMPTISISKDEVSRGM------ 350
           A++ +A   T +VHG+ E E+   A+   F      +  + T+  +  EV  G       
Sbjct: 299 AQRKLAELFTDLVHGQHEREQVVVASQALFGRGELRELDLSTLDAAMAEVPSGEVALADA 358

Query: 351 -GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
             ++ L++    A S   ARR +K     +NN+ +++E+     +D      + +  GK+
Sbjct: 359 PTIVDLLIAGDLADSRGAARRAVKEGGAYVNNTKVTDEEWTPTAEDLLHGTWLVVRRGKR 418

Query: 410 NHIICHL 416
           N     +
Sbjct: 419 NFAGVKV 425


>gi|224537287|ref|ZP_03677826.1| hypothetical protein BACCELL_02164 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224521108|gb|EEF90213.1| hypothetical protein BACCELL_02164 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 430

 Score =  487 bits (1253), Expect = e-135,   Method: Composition-based stats.
 Identities = 153/428 (35%), Positives = 227/428 (53%), Gaps = 22/428 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG +H +    E   L ++  VTAYIG+D TA SLH GHL  +M+L   Q+ 
Sbjct: 2   NFVEELRWRGMLHDMMPGTE--ELLAKEQVTAYIGFDPTADSLHIGHLCSVMILRHFQRC 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG-TGKTDALM 125
           GHKP++L+GG T +IGDPS +   R ++  + +Q N++ +K   S F+ +       A +
Sbjct: 60  GHKPMALIGGATGMIGDPSGKSAERNLLTEEILQRNLDGMKKQLSKFLDFESDAPNRAEL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQAYD 183
           +NN  W+ +  ++D  RE+G   +VN M++ +SV+ RL  E    LSF EF Y +LQ YD
Sbjct: 120 VNNYDWMKNFTFLDFAREVGKHITVNYMMAKDSVKKRLNGEARDGLSFTEFTYQLLQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ L +   C+LQMGGSDQWGNI  G +L  R    ++FALTSPL+T A G K GKT SG
Sbjct: 180 FLHLYETKGCKLQMGGSDQWGNITTGAELIRRTNGGEVFALTSPLITKADGGKFGKTESG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKKI 301
            IWL+   TSPY F+Q+W N+ DAD   + K  T+L   EI+ +         +   +K 
Sbjct: 240 NIWLDPRYTSPYKFYQFWLNVSDADAARYIKIFTSLSREEIEALTAEHETAPHLRVLQKR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDEVS 347
           +A E+T MVH  E+   A  A+   F  +                 + +P   +SKD VS
Sbjct: 300 LAKEVTIMVHSEEDYNAAVDASNILFGNATSDALKKLDEDTLLAVFEGVPQFEVSKDAVS 359

Query: 348 RGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+  + L    A    S  E R+ ++   + +N   +      I   D      + +  
Sbjct: 360 AGVKAVDLFTDNAAVFASKGEMRKLVQGGGVSLNKEKLEAFDQVITSADLLDEKYLLVQR 419

Query: 407 GKKNHIIC 414
           GKKN+ + 
Sbjct: 420 GKKNYYLI 427


>gi|317499370|ref|ZP_07957638.1| tyrosyl-tRNA synthetase [Lachnospiraceae bacterium 5_1_63FAA]
 gi|316893339|gb|EFV15553.1| tyrosyl-tRNA synthetase [Lachnospiraceae bacterium 5_1_63FAA]
          Length = 409

 Score =  487 bits (1253), Expect = e-135,   Method: Composition-based stats.
 Identities = 173/409 (42%), Positives = 253/409 (61%), Gaps = 5/409 (1%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +   +L ERGFI Q ++   L  L  +  VT YIG+D TA SL AGH   +M +  +QK 
Sbjct: 4   NVYDVLQERGFIAQTTHEE-LRELLGKEKVTFYIGFDATADSLTAGHFLTIMAMMHMQKA 62

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI+L+GGGT++IGDPS + + R M+  + I  N ++ K   S FI +   K  A++ 
Sbjct: 63  GHRPIALLGGGTTMIGDPSGKSDMRNMLTKETINHNAKRFKEQLSRFITFDDDK--AILA 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL ++ Y++ LRE+G  FSVN+ML+ E  + R++R   L+F EFNYM++Q YDF+E
Sbjct: 121 NNADWLLNLNYVEFLREVGVHFSVNKMLTAECYKQRMER--GLTFFEFNYMLMQGYDFLE 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + Y C+L+MGG+DQW NI+ G DL  R +    + LT  LLT + G KMGKT++GA+W
Sbjct: 179 LNRRYGCKLEMGGNDQWSNILAGADLIRRKEKKDAYGLTLTLLTRSDGVKMGKTMAGAVW 238

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           L+ E TSPY+F+QYWRNI+D  V      LT LPM E+ R+  L+G EIN+AK+++A E+
Sbjct: 239 LDPEKTSPYDFYQYWRNIEDVKVEECLSLLTFLPMDEVRRLGALEGAEINKAKEVLAYEV 298

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
           T +VHG EEA+KA TAA   F     ++  PT     D+++ G+ +LT++V +   T+ +
Sbjct: 299 TKIVHGEEEAKKAQTAAKAMFVSGGANEDAPTFEYEADKLAEGIDILTMLVDSKLCTTRS 358

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +ARR ++   + +N   +          DFD    I L  GKK      
Sbjct: 359 DARRMVQQGGVSVNGKKVDAIDATFGKADFDDKDRILLKKGKKKFCQIK 407


>gi|317129956|ref|YP_004096238.1| tyrosyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522]
 gi|315474904|gb|ADU31507.1| tyrosyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522]
          Length = 423

 Score =  487 bits (1253), Expect = e-135,   Method: Composition-based stats.
 Identities = 153/423 (36%), Positives = 226/423 (53%), Gaps = 17/423 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + L  L  RG ++Q+++   L  L ++  VT Y G+D T  SLH GHL  ++ L   Q  
Sbjct: 2   NLLEDLQFRGLVNQVTDEDGLKELLNKEAVTLYCGFDPTGDSLHIGHLLTILTLRRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP++L+GG T +IGDPS +   R +     +++  +KIKG  S F+ +  G+T A ++
Sbjct: 62  GHKPLALVGGATGLIGDPSGKKAERTLNEQNIVEQFSDKIKGQLSRFLDF-KGETSAKLV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W+ S+  ID LR++G  F +N ML+ +SV SR+     +SF EF+YMILQ+YDF E
Sbjct: 121 NNYDWIGSMSVIDFLRDVGKNFGLNYMLAKDSVESRISS--GISFTEFSYMILQSYDFYE 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKT------PKLFALTSPLLTTASGTKMGKT 240
           L KN  C+LQ+GGSDQWGNI  G++L  ++         K F  T PL+T A GTK GKT
Sbjct: 179 LYKNEGCKLQIGGSDQWGNITAGLELIRKMNGQEEDERAKAFGFTIPLVTKADGTKFGKT 238

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--A 298
             GAIWL+ E TSPY F+Q+  N DD DV+ F K  T L   EI+ +     +  +E  A
Sbjct: 239 EGGAIWLDPEKTSPYEFYQFLLNTDDNDVIKFLKYFTFLSQEEIEALEVEVAERPHERAA 298

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQ-HMPTI-----SISKDEVSRGMGL 352
           +K +A E+T  VH     ++A   +   F      Q     +      +        +GL
Sbjct: 299 QKRLAEELTAFVHDEAALKQAKNISTALFSGGDLKQLTADEVLQGFKDVPSFTTETNIGL 358

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           + L+V AG + S  +AR  + + A+ IN          +  ++        +  GKK   
Sbjct: 359 IDLLVNAGISPSKRQAREDISNGAVYINGDRCQELDKVVGNEEKIDGQFTIIRRGKKKFF 418

Query: 413 ICH 415
           +  
Sbjct: 419 LIR 421


>gi|19552623|ref|NP_600625.1| tyrosyl-tRNA synthetase [Corynebacterium glutamicum ATCC 13032]
 gi|62390291|ref|YP_225693.1| tyrosyl-tRNA synthetase [Corynebacterium glutamicum ATCC 13032]
 gi|81760803|sp|Q8NQM8|SYY_CORGL RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|21324174|dbj|BAB98799.1| Tyrosyl-tRNA synthetase [Corynebacterium glutamicum ATCC 13032]
 gi|41325628|emb|CAF21417.1| TYROSYL-TRNA SYNTHETASE [Corynebacterium glutamicum ATCC 13032]
          Length = 420

 Score =  486 bits (1252), Expect = e-135,   Method: Composition-based stats.
 Identities = 147/423 (34%), Positives = 230/423 (54%), Gaps = 15/423 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  LS RG I+Q ++   L    S   +T Y G+D T  SLHAGHL  L++L   Q+ 
Sbjct: 2   NIIDELSWRGLINQSTDLEALREEAST-PITLYCGFDPTGPSLHAGHLVPLLMLRRFQQA 60

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH PI L GG T +IGDP    E R M  +  + +  E+I G  S F+ +  G+  A ++
Sbjct: 61  GHNPIVLAGGATGMIGDPRDVGE-RTMNSADTVSDWAERISGQLSRFVDF-DGEHAARLV 118

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   +  +  LR++G  FS+N ML+ ++V+ RL+ +  +S+ EF+YM+LQA D+VE
Sbjct: 119 NNAEWTNEMSVVTFLRDVGKHFSLNTMLARDTVKRRLESD-GISYTEFSYMLLQANDYVE 177

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT-LSGAI 245
           L K + C LQ+GG DQWGNI+ G+DL  R+    + A+T PL+T + G K GK+   G++
Sbjct: 178 LNKRFGCTLQVGGGDQWGNIVSGVDLNRRVNGTSVHAVTVPLVTDSDGKKFGKSTGGGSL 237

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIA 303
           WL+ EMTSPY ++QY+ N  DADV+ + +  T L   E+  +     +     EA++ +A
Sbjct: 238 WLDPEMTSPYAWYQYFINASDADVIRYLRWFTFLTQEELAELEVEVAERPFKREAQRRLA 297

Query: 304 TEITTMVHGREEAEKAATAAMECF--------DMSIHSQHMPTISISKDEVSRGMGLLTL 355
            E+T +VHG E  E    AA   F        D    +  +   ++++ +      ++ L
Sbjct: 298 REMTNLVHGTEATEAVELAAQALFGRAELRDLDEKTLAASVSETAVAEIKAGEPRTIIDL 357

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +V +G A S   A+R +K     +NN  I ++  +   +D      + L  GKKN     
Sbjct: 358 LVASGLADSKGAAKRAVKEGGAYVNNERIESDDWEPFAEDLLHGSWLVLRRGKKNFAGVQ 417

Query: 416 LCG 418
           + G
Sbjct: 418 ILG 420


>gi|114799842|ref|YP_761314.1| tyrosyl-tRNA synthetase [Hyphomonas neptunium ATCC 15444]
 gi|114740016|gb|ABI78141.1| tyrosyl-tRNA synthetase [Hyphomonas neptunium ATCC 15444]
          Length = 416

 Score =  486 bits (1252), Expect = e-135,   Method: Composition-based stats.
 Identities = 182/415 (43%), Positives = 269/415 (64%), Gaps = 1/415 (0%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  +KS+FL  LS RGFI   ++  ELD  CS G   AY+GYD TA SLH GHL  +M+L
Sbjct: 1   MSDYKSEFLRELSWRGFIKDTTHKAELDAYCSNGTPVAYVGYDATADSLHVGHLMTIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ G KPI+LMGGGT+ +GDP+ +++SR ++   +I  NI  IK  F  F+++G G 
Sbjct: 61  RIFQRHGGKPIALMGGGTTKVGDPTDKEKSRPLLTDDQINANIAGIKTAFEPFLRFGDGA 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
            DA+M+NN  WL  + Y+++LR IG +F++N M+  ++VR RL+ EQ  +FLEFNY+++Q
Sbjct: 121 NDAIMVNNNDWLGELGYLEMLRAIGVYFTINTMVKQDTVRRRLEAEQPYTFLEFNYLLMQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           +YDF+EL + + CR+Q+GGSDQWGNI+ G+DL  + +    F +T+ L+TT+SG KMGKT
Sbjct: 181 SYDFLELFRRHGCRMQLGGSDQWGNIVGGVDLVHKAEGGDAFGVTAHLVTTSSGVKMGKT 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           + GA+WLN +  SPY +WQ+WRN +DADV  F +  T L   EI+R+  L+G  IN+AK 
Sbjct: 241 VGGAVWLNADRKSPYEYWQFWRNTEDADVGKFLRLFTDLGREEIERLEALEGSAINDAKI 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
            +A   TT++HG   A +A  AA   F     +  +PT  + + E+  GM +      AG
Sbjct: 301 ALANAATTLLHGAAAAAEAEAAAKAVFAGGASADALPTALVPQAELEAGMLVAAACAAAG 360

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            + S  EARR ++  AI++N++++S+   ++ + D    G IKLS GKK H +  
Sbjct: 361 LSKSNGEARRLIEQGAIRVNDALVSDPNAKVSMADM-QDGAIKLSAGKKRHALVK 414


>gi|325204797|gb|ADZ00251.1| tyrosyl-tRNA synthetase [Neisseria meningitidis M01-240355]
          Length = 431

 Score =  486 bits (1252), Expect = e-135,   Method: Composition-based stats.
 Identities = 155/427 (36%), Positives = 227/427 (53%), Gaps = 21/427 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            +  L  RG I Q ++   LD L ++  ++ Y G+D TA SLH GHL  ++ L   Q+ G
Sbjct: 3   VIQDLQSRGLIAQTTDIEALDALLNEQKISLYCGFDPTADSLHIGHLLPVLALRRFQQAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H PI+L+GG T +IGDPSF+   R +  ++ +   +E I+   + F+ +  G   A+M N
Sbjct: 63  HTPIALVGGATGMIGDPSFKAAERSLNSAETVAGWVESIRSQLTPFLSF-EGGNAAIMAN 121

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDFVE 186
           N  W   +  +D LR+IG  FSVN ML+ ESV+ R+ R    +SF EF Y +LQ YDF E
Sbjct: 122 NADWFGKMNCLDFLRDIGKHFSVNAMLNKESVKQRIDRDGAGISFTEFAYSLLQGYDFAE 181

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L K +   L++GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  GA+W
Sbjct: 182 LNKRHGAVLEIGGSDQWGNITAGIDLTRRLNQKQVFGLTLPLVTKSDGTKFGKTEGGAVW 241

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINEAKKIIAT 304
           LN + TSPY F+Q+W  + DADV  F K  T L + EID +           EA++I+A 
Sbjct: 242 LNAKKTSPYQFYQFWLKVADADVYKFLKYFTFLSIEEIDAVEAKDQASGSKPEAQRILAE 301

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTLIVK 358
           E+T ++HG E    A   +   F     S      + +    +   EVS  + ++  +VK
Sbjct: 302 EMTRLIHGEEALAAAQRISESLFAEDQSSLTESDFEQLALDGLPTFEVSESLNVVETLVK 361

Query: 359 AGFATSTNEARRHLKSNAIKINNSIIS-----------NEKLQIKLQDFDSTGNIKLSFG 407
            G A+S  EAR  + + A+ +N                ++   +  +         L  G
Sbjct: 362 TGLASSNKEARGFVNNKAVLLNGKPAEANNPNHAAERPDDACLLTDEHKRFGKYTILRRG 421

Query: 408 KKNHIIC 414
           K+NH + 
Sbjct: 422 KRNHALL 428


>gi|167768079|ref|ZP_02440132.1| hypothetical protein CLOSS21_02624 [Clostridium sp. SS2/1]
 gi|167710408|gb|EDS20987.1| hypothetical protein CLOSS21_02624 [Clostridium sp. SS2/1]
 gi|291561074|emb|CBL39874.1| tyrosyl-tRNA synthetase [butyrate-producing bacterium SSC/2]
          Length = 409

 Score =  486 bits (1252), Expect = e-135,   Method: Composition-based stats.
 Identities = 173/409 (42%), Positives = 253/409 (61%), Gaps = 5/409 (1%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +   +L ERGFI Q ++   L  L  +  VT YIG+D TA SL AGH   +M +  +QK 
Sbjct: 4   NVYDVLQERGFIAQTTHEE-LRELLGKEKVTFYIGFDATADSLTAGHFLTIMAMMHMQKA 62

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI+L+GGGT++IGDPS + + R M+  + I  N ++ K   S FI +   K  A++ 
Sbjct: 63  GHRPIALLGGGTTMIGDPSGKSDMRNMLTKETIDHNAKRFKEQLSRFITFDDDK--AILA 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL ++ Y++ LRE+G  FSVN+ML+ E  + R++R   L+F EFNYM++Q YDF+E
Sbjct: 121 NNADWLLNLNYVEFLREVGVHFSVNKMLTAECYKQRMER--GLTFFEFNYMLMQGYDFLE 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + Y C+L+MGG+DQW NI+ G DL  R +    + LT  LLT + G KMGKT++GA+W
Sbjct: 179 LNRRYGCKLEMGGNDQWSNILAGADLIRRKEKKDAYGLTLTLLTRSDGVKMGKTMAGAVW 238

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           L+ E TSPY+F+QYWRNI+D  V      LT LPM E+ R+  L+G EIN+AK+++A E+
Sbjct: 239 LDPEKTSPYDFYQYWRNIEDVKVEECLSLLTFLPMDEVRRLGALEGAEINKAKEVLAYEV 298

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
           T +VHG EEA+KA TAA   F     ++  PT     D+++ G+ +LT++V +   T+ +
Sbjct: 299 TKIVHGEEEAKKAQTAAKAMFVSGGANEDAPTFEYEADKLAEGIDILTMLVDSKLCTTRS 358

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +ARR ++   + +N   +          DFD    I L  GKK      
Sbjct: 359 DARRMVQQGGVSVNGKKVDAIDATFGKADFDDKDRILLKKGKKKFCQIK 407


>gi|319952577|ref|YP_004163844.1| tyrosyl-tRNA synthetase [Cellulophaga algicola DSM 14237]
 gi|319421237|gb|ADV48346.1| Tyrosyl-tRNA synthetase [Cellulophaga algicola DSM 14237]
          Length = 431

 Score =  486 bits (1252), Expect = e-135,   Method: Composition-based stats.
 Identities = 153/434 (35%), Positives = 233/434 (53%), Gaps = 23/434 (5%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
            K++F++ L  RG +H      E        + +AY+G D TA SLH GHL  +M+L   
Sbjct: 1   MKTNFVAELQWRGMLHDAMPGTE--EHLMNEMQSAYVGIDPTADSLHIGHLVGVMMLRHF 58

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY-GTGKTD 122
           Q  GHKP +L+GG T +IGDPS +   R ++  + ++ N + +K   S F+ + G     
Sbjct: 59  QLAGHKPYALIGGATGMIGDPSGKSTERNLLDEKTLRHNQDALKAQLSRFLDFSGAADNA 118

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQ 180
           A+++NN  W+    +++ +R++G   +VN M++ +SV+ RL  E  + +SF EF Y ++Q
Sbjct: 119 AILVNNYDWMKDFSFLEFIRDVGKHITVNYMMAKDSVKKRLSSEAKEGMSFTEFTYQLVQ 178

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
            YDF+ L K ++C LQMGGSDQWGNI  G +L  R+   K +ALT PL+T A GTK GKT
Sbjct: 179 GYDFLHLFKEHNCTLQMGGSDQWGNITTGTELIRRMGGGKGYALTCPLITKADGTKFGKT 238

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEA 298
             G +WL+ E TSPY F+QYW N  D D   + K  T +   EI+       +   +   
Sbjct: 239 EGGNVWLDAERTSPYKFYQYWLNTSDEDAEKYIKIFTFIGKEEIEALVAEHKEAPHLRVL 298

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKD 344
           +K +A EIT MVH +EE + A  A+   F  S  +              + +P   ++  
Sbjct: 299 QKRLADEITVMVHSQEELDNAVEASGILFGKSTAASLKKLNEKTFLDIFEGVPQAEVAMA 358

Query: 345 EVSRGMGLL-TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
           +V  G+ ++  L  K  F  S  EARR LK N+I +N   +  E   I  +D  +   + 
Sbjct: 359 DVEEGLDMIGALAAKTNFLGSNGEARRELKQNSISVNKEKVK-EDYIITKEDLINDKFVL 417

Query: 404 LSFGKKNHIICHLC 417
           L  GKKN+ +  + 
Sbjct: 418 LQRGKKNYFVVVVV 431


>gi|116252758|ref|YP_768596.1| tyrosyl-tRNA synthetase [Rhizobium leguminosarum bv. viciae 3841]
 gi|115257406|emb|CAK08501.1| putative tyrosyl-tRNA synthetase [Rhizobium leguminosarum bv.
           viciae 3841]
          Length = 421

 Score =  486 bits (1252), Expect = e-135,   Method: Composition-based stats.
 Identities = 206/414 (49%), Positives = 278/414 (67%), Gaps = 2/414 (0%)

Query: 2   PAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
              +SDFL  LSERGF+HQ ++   LD     G  TAY G+DLTA SLH GHL  +M+L 
Sbjct: 8   TGPRSDFLRTLSERGFLHQCTDLGALDSWLCSGAGTAYNGFDLTADSLHVGHLIPIMMLR 67

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKT 121
           W QKTG+KPI+L+GG TS +GDPSFRD SR  +  ++I +N+  I+ +F  F+ +G G T
Sbjct: 68  WFQKTGNKPIALLGGATSRLGDPSFRDTSRPFLSEEQIMKNLIGIRRVFERFLAFGDGPT 127

Query: 122 DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA 181
           DA+M+NN  WL  + Y+D LR+IG  FSVNRML+ ESVR RL+REQSLS LEFNYM++QA
Sbjct: 128 DAVMVNNADWLGGLNYLDFLRDIGPHFSVNRMLTSESVRQRLEREQSLSLLEFNYMVMQA 187

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
           YDF  LA++  C LQ+GGSDQWGNI+ G++ G R+    LF LT+PLLTT+SG KMGK++
Sbjct: 188 YDFHVLAESRGCLLQLGGSDQWGNIVSGVEFGRRIGGRTLFGLTAPLLTTSSGAKMGKSV 247

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKI 301
           SGA+WLN +  SPY FWQ+WRN  DADV  F +  T LP+ EI R+  L+  EINEAKKI
Sbjct: 248 SGAVWLNADRLSPYEFWQFWRNTGDADVGRFLRLFTELPLDEIARLEVLRDSEINEAKKI 307

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGF 361
           +A +IT + HG + A +A+  +   F+       +PT+ +  D +     L+  +V AG 
Sbjct: 308 LADQITRLCHGADAAVQASETSRRIFEAGEVPAGLPTVRLP-DSLRGDFPLVDAMVVAGL 366

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           A S +EARR +    +++N   +S+E +Q+   D    G I+LS GKK HI+  
Sbjct: 367 AKSKSEARRLIGGGGVRVNGGSVSDEAMQLGDFD-VQDGVIRLSVGKKRHILLQ 419


>gi|325201519|gb|ADY96973.1| tyrosyl-tRNA synthetase [Neisseria meningitidis M01-240149]
 gi|325207498|gb|ADZ02950.1| tyrosyl-tRNA synthetase [Neisseria meningitidis NZ-05/33]
          Length = 431

 Score =  486 bits (1252), Expect = e-135,   Method: Composition-based stats.
 Identities = 157/427 (36%), Positives = 227/427 (53%), Gaps = 21/427 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            +  L  R  I Q ++   LD L ++  +  Y G+D TA SLH GHL  ++ L   Q+ G
Sbjct: 3   VIQDLQSRDLIAQTTDIEALDALLNEQKIALYCGFDPTADSLHIGHLLPVLALRRFQQAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H PI+L+GG T +IGDPSF+   R +  ++ +   +E I+   + F+ +  G   A+M N
Sbjct: 63  HTPIALVGGATGMIGDPSFKAAERSLNSAETVAGWVESIRNQLTPFLSF-EGGNAAIMAN 121

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDFVE 186
           N  W  S+  +D LR+IG  FSVN ML+ ESV+ R+ R    +SF EF Y +LQ YDF E
Sbjct: 122 NADWFGSMNCLDFLRDIGKHFSVNAMLNKESVKQRIDRDGAGISFTEFAYSLLQGYDFAE 181

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L K +   L++GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  GA+W
Sbjct: 182 LNKRHGAVLEIGGSDQWGNITAGIDLTRRLNQKQVFGLTLPLVTKSDGTKFGKTEGGAVW 241

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINEAKKIIAT 304
           LN + TSPY F+Q+W  + DADV  F K  T L + EID +           EA++I+A 
Sbjct: 242 LNAKKTSPYQFYQFWLKVADADVYKFLKYFTFLSIEEIDAVEAKDKASGSKPEAQRILAE 301

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTLIVK 358
           E+T ++HG E    A   +   F     S      + +    +   EVS G+ ++  +VK
Sbjct: 302 EMTRLIHGEEALAAAQRISESLFAEDQSSLTESDFEQLALDGLPAFEVSDGINVVEALVK 361

Query: 359 AGFATSTNEARRHLKSNAIKINNSIIS-----------NEKLQIKLQDFDSTGNIKLSFG 407
            G A+S  EAR  + S A+ +N                ++   +  +         L  G
Sbjct: 362 TGLASSNKEARGFVNSKAVLLNGKPAEANNPNHAAERPDDACLLTDEHKRFGKYTILRRG 421

Query: 408 KKNHIIC 414
           K+NH + 
Sbjct: 422 KRNHALL 428


>gi|315223534|ref|ZP_07865389.1| tyrosine--tRNA ligase [Capnocytophaga ochracea F0287]
 gi|314946450|gb|EFS98444.1| tyrosine--tRNA ligase [Capnocytophaga ochracea F0287]
          Length = 450

 Score =  486 bits (1252), Expect = e-135,   Method: Composition-based stats.
 Identities = 158/435 (36%), Positives = 230/435 (52%), Gaps = 24/435 (5%)

Query: 2   PAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
                +F+  L  RG I  I    E      +G+  AY+G D TA SLH GHL  +M+L 
Sbjct: 17  TKLMKNFIEELRWRGMIQDIMPETE--QHLMEGLRAAYVGIDPTADSLHIGHLVGVMMLR 74

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG-TGK 120
             Q  GHKP +L+GG T +IGDPS +   R ++  + +  NI  IK   + F+ +  T  
Sbjct: 75  HFQNCGHKPYALVGGATGMIGDPSGKSVERNLLTEEVLAHNIAGIKKQLAKFLDFESTAP 134

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL---KREQSLSFLEFNYM 177
             A ++NN  W+    ++  +R+IG   +VN M++ +SV+ R    +    +SF EF+Y 
Sbjct: 135 NRAELVNNYDWMKEFSFLSFIRDIGKHITVNYMMAKDSVKKRFDPNENTDGMSFTEFSYQ 194

Query: 178 ILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
           +LQ YDF+ L +  +  LQMGGSDQWGNI  G +L  R+   K +ALT PL+T A GTK 
Sbjct: 195 LLQGYDFLHLYREKNLTLQMGGSDQWGNITTGTELIRRIAGGKAYALTCPLITKADGTKF 254

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEI 295
           GK+  G +WL+ E TSPY F+QYW N  DAD   + K  T L   EI+ +         +
Sbjct: 255 GKSEGGNVWLDPEKTSPYKFFQYWINTSDADAERYIKIFTMLSKEEINTLIAQHTEAPHL 314

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISI 341
              +  +A E+T +VHGREE EKA  A+   F  S  +                +P   +
Sbjct: 315 RILQNKLAEELTLLVHGREELEKAKKASQILFGNSTSADLRTLDEKTFLEVFDGVPQAEV 374

Query: 342 SKDEVSRGMGLLTLI-VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG 400
           S  +++ G+ ++ ++  K GF +S +EARR LK N+I +N   +  E  QI  +D     
Sbjct: 375 SAADITSGLDMIAILSAKTGFISSNSEARRALKENSISVNKEKV-GEDYQIGEKDLVDEK 433

Query: 401 NIKLSFGKKNHIICH 415
            I L  GKKN+ I  
Sbjct: 434 FILLQRGKKNYFIVK 448


>gi|255066567|ref|ZP_05318422.1| tyrosine--tRNA ligase [Neisseria sicca ATCC 29256]
 gi|255049151|gb|EET44615.1| tyrosine--tRNA ligase [Neisseria sicca ATCC 29256]
          Length = 432

 Score =  486 bits (1252), Expect = e-135,   Method: Composition-based stats.
 Identities = 155/429 (36%), Positives = 228/429 (53%), Gaps = 21/429 (4%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
              +  L  RG I Q ++   LD L ++  +  Y G+D TA SLH GHL  ++ L   Q+
Sbjct: 2   KSVIQDLQSRGLIAQTTDIEALDALLNEQKIALYCGFDPTADSLHIGHLLPVLALRRFQQ 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH PI+L+GG T +IGDPSF+   R +  ++ +   +E I+     F+ +  G+  A+M
Sbjct: 62  AGHTPIALVGGATGMIGDPSFKAVERSLNSAETVAGWVESIRNQLKPFLSF-EGENAAIM 120

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYDF 184
            NN  W  S+  +D LR+IG  FSVN ML+ ESV+ R++R+   +SF EF Y +LQ YDF
Sbjct: 121 ANNADWFGSMNCLDFLRDIGKHFSVNAMLNKESVKQRIERDDVGISFTEFAYSLLQGYDF 180

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
            EL K +   L++GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  GA
Sbjct: 181 AELNKRHGAVLEIGGSDQWGNITAGIDLTRRLNQKQVFGLTLPLVTKSDGTKFGKTEGGA 240

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINEAKKII 302
           +WLN + TSPY F+Q+W  + DADV  F K  T L + EID +           EA++I+
Sbjct: 241 VWLNAKKTSPYQFYQFWLKVADADVYKFLKYFTFLSIEEIDAIEAKDKASGTKPEAQRIL 300

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTLI 356
           A E+T ++HG    + A   +   F     S      + +    +   EVS  + ++  +
Sbjct: 301 AEEMTRLIHGEAALQAAQRISESLFAEDQSSLTESDFEQLALDGLPAFEVSDDLNVVEAL 360

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIIS-----------NEKLQIKLQDFDSTGNIKLS 405
           VK G A+S  EAR  + S A+ +N                ++   +            + 
Sbjct: 361 VKTGLASSNKEARGFVNSKAVLLNGQAAESNNPNHAAERPDDAYLLTDAHKRFGKYTIVR 420

Query: 406 FGKKNHIIC 414
            GK+NH + 
Sbjct: 421 RGKRNHALL 429


>gi|189464681|ref|ZP_03013466.1| hypothetical protein BACINT_01025 [Bacteroides intestinalis DSM
           17393]
 gi|189436955|gb|EDV05940.1| hypothetical protein BACINT_01025 [Bacteroides intestinalis DSM
           17393]
          Length = 430

 Score =  486 bits (1252), Expect = e-135,   Method: Composition-based stats.
 Identities = 152/428 (35%), Positives = 227/428 (53%), Gaps = 22/428 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG +H +    E   L ++  VTAYIG+D TA SLH GHL  +M+L   Q+ 
Sbjct: 2   NFVEELKWRGMLHDMMPGTE--ELLAKEQVTAYIGFDPTADSLHIGHLCSVMILRHFQRC 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG-TGKTDALM 125
           GHKP++L+GG T +IGDPS +   R ++  + +Q N++ +K     F+ +       A +
Sbjct: 60  GHKPMALIGGATGMIGDPSGKSAERNLLTEEILQRNMDGMKKQLGKFLDFESDAPNRAEL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQAYD 183
           +NN  W+ +  ++D  RE+G   +VN M++ +SV+ RL  E    LSF EF Y +LQ YD
Sbjct: 120 VNNYDWMKNFTFLDFAREVGKHITVNYMMAKDSVKKRLNGEARDGLSFTEFTYQLLQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ L +   C+LQMGGSDQWGNI  G +L  R    ++FALTSPL+T A G K GKT SG
Sbjct: 180 FLHLYETKGCKLQMGGSDQWGNITTGAELIRRTNGGEVFALTSPLITKADGGKFGKTESG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKI 301
            IWL+   TSPY F+Q+W N+ DAD   + K  T+L   EID   +       +   +K 
Sbjct: 240 NIWLDPRYTSPYKFYQFWLNVSDADAARYIKIFTSLSKEEIDALIVEHEAAPHLRILQKR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDEVS 347
           +A E+T MVH  E+   A  A+   F  +                 + +P   +SKD V+
Sbjct: 300 LAKEVTIMVHSEEDYNAAVDASNILFGNATSDALKKLDEDTLLAVFEGVPQFEVSKDAVA 359

Query: 348 RGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+  + L  + A    S  E R+ ++   + +N   +      I   D      + +  
Sbjct: 360 AGVKAVDLFTENAAIFASKGEMRKLVQGGGVSLNKEKLEAFDQVITSADLLDEKYLLVQR 419

Query: 407 GKKNHIIC 414
           GKKN+ + 
Sbjct: 420 GKKNYYLI 427


>gi|295132372|ref|YP_003583048.1| tyrosyl-tRNA synthetase [Zunongwangia profunda SM-A87]
 gi|294980387|gb|ADF50852.1| tyrosyl-tRNA synthetase [Zunongwangia profunda SM-A87]
          Length = 431

 Score =  486 bits (1252), Expect = e-135,   Method: Composition-based stats.
 Identities = 155/432 (35%), Positives = 233/432 (53%), Gaps = 24/432 (5%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
            +F+  L+ RG IH +    E     ++ +  AY+G D TA SLH GHL  +M+L   Q 
Sbjct: 3   KNFVEELTWRGMIHDVMPGTE--EHLNEQMRAAYVGIDPTADSLHIGHLVGVMMLRHFQL 60

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY-GTGKTDAL 124
            GHKP +L+GG T +IGDPS +   R ++    ++ N   IK   S F+ + G  +  A+
Sbjct: 61  AGHKPYALVGGATGMIGDPSGKSAERNLLDEATLRHNQNSIKEQLSRFLDFEGAEENTAV 120

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQAY 182
           ++NN  W+    ++D +R++G   +VN M++ +SV+ RL  +  + +SF EF Y ++Q Y
Sbjct: 121 LVNNYDWMKEFSFLDFIRDVGKHITVNYMMAKDSVKKRLSSDASEGMSFTEFTYQLVQGY 180

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DF+ L + + C LQMGGSDQWGNI  G ++  R+   K +ALT PL+T A GTK GKT  
Sbjct: 181 DFLHLFREHQCTLQMGGSDQWGNITTGTEMIRRIGDGKGYALTCPLITKADGTKFGKTEG 240

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKK 300
           G IWL+   TSPY F+QYW N  DAD   + K  T L   EI+       +   + E +K
Sbjct: 241 GNIWLDANRTSPYKFYQYWLNTSDADAEKYIKIFTFLSKEEIEDLTSKHQEAPHLRELQK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDEV 346
           ++A E+T MVH  E+   A  A+   F  S                 + +P   +S+ EV
Sbjct: 301 VLAKEVTVMVHSEEDYNNAVKASEVLFGKSTAEDLKSLNEATFLDVFEGVPQAEVSRAEV 360

Query: 347 SRGMGLL-TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLS 405
             G+ ++  L  K  F  S  EARR LK N++ +N   +  E   I L D  +   + ++
Sbjct: 361 EAGLDMIGALAAKTDFLKSNGEARRALKENSVSVNKEKVQ-EDYTISLDDLINDKYVIIN 419

Query: 406 FGKKN-HIICHL 416
            GKKN +I+  +
Sbjct: 420 KGKKNTYILVVV 431


>gi|229087577|ref|ZP_04219707.1| Tyrosyl-tRNA synthetase [Bacillus cereus Rock3-44]
 gi|228695693|gb|EEL48548.1| Tyrosyl-tRNA synthetase [Bacillus cereus Rock3-44]
          Length = 420

 Score =  486 bits (1252), Expect = e-135,   Method: Composition-based stats.
 Identities = 149/424 (35%), Positives = 218/424 (51%), Gaps = 21/424 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  R  I+Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  
Sbjct: 2   NIIDELEWRDAINQQTDEEGLRKLVEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P+ L+GG T  IGDPS R   R++   +++Q N++ +         +G G ++  M+
Sbjct: 62  GHHPVILIGGATGTIGDPSGRQTERQLQTLEQVQHNVDALTAQMKKLFDFG-GNSEVKMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I  I+ LR+ G  FSVN ML+ + V SRL  +  +SF EF Y ILQ+ DF  
Sbjct: 121 NNYDWTHQINIIEFLRDYGKNFSVNSMLAKDIVASRL--DTGISFTEFTYQILQSMDFHH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSGA 244
           L K    +LQ+GGSDQWGNI  G+DL  RL+ P  K+F LT PLL  + GTK GKT  GA
Sbjct: 179 LYKEEGVQLQIGGSDQWGNITSGLDLIRRLEGPEAKVFGLTIPLLLKSDGTKFGKTAGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKII 302
           IWL+ E T+P+ F+Q+W N DD DV+ + K  T L    ID +A     E    EA+K++
Sbjct: 239 IWLDPEKTTPFEFYQFWVNTDDRDVIKYLKFFTFLTKDVIDELAVKVQAEPHKREAQKVL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGL 352
             E+T  VHG +   +A       F   I S          + MPT    K        +
Sbjct: 299 GEEMTKFVHGEDAFLQAIKITEALFSGDIKSLTADEIEQGFKDMPTFHAPK----ESKNI 354

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           +  +V  G   S  +AR  + + AI +N   +++    + + +      I +  GKKN+ 
Sbjct: 355 VEWLVDLGIEPSRRQAREDINNGAILMNGDKVTDVSTDVTVDNSFDGRFIIIRKGKKNYS 414

Query: 413 ICHL 416
           +  L
Sbjct: 415 LVKL 418


>gi|256832352|ref|YP_003161079.1| tyrosyl-tRNA synthetase [Jonesia denitrificans DSM 20603]
 gi|256685883|gb|ACV08776.1| tyrosyl-tRNA synthetase [Jonesia denitrificans DSM 20603]
          Length = 422

 Score =  486 bits (1252), Expect = e-135,   Method: Composition-based stats.
 Identities = 143/412 (34%), Positives = 223/412 (54%), Gaps = 10/412 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           ++ L  L  RG + Q ++   L      G VT Y G+D TA SLH GHL QL++L  LQ+
Sbjct: 2   TNVLDELQWRGLVSQTTDIDALRAAFENGPVTYYCGFDPTAPSLHHGHLVQLVVLKHLQR 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+PI+L+GG T +IGDP    E R +   + +   +E+++     F+ +  G+  A+M
Sbjct: 62  AGHRPIALVGGATGLIGDPRMSGE-RVLNSKEVVAGWVERLRSQIERFLDF-EGENAAMM 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  W   +  +D LR++G  + +  ML+ ++V  RL  ++ +SF EF+Y ILQ  DF+
Sbjct: 120 VNNLDWHGQLSALDFLRDVGKHYRLGTMLAKDTVARRLASDEGISFTEFSYQILQGMDFL 179

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           EL + Y C LQ GG+DQWGN++ G++L  +     + ALT+PL+T A GTK GK+  GA+
Sbjct: 180 ELNRRYGCTLQTGGNDQWGNLLSGVELIRKSDRVAVHALTTPLITKADGTKFGKSEGGAV 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIA 303
           WL+  M SPY F+Q+W N DD DV+ + K  T     +I+ + +   +  +  EA+K +A
Sbjct: 240 WLDPAMMSPYAFYQFWVNSDDRDVIGWLKTFTFRSRQDIEALEQSLEERPQAREAQKALA 299

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMP------TISISKDEVSRGMGLLTLIV 357
            ++T MVHG   A++A  A+   F                T  +    +S G  ++  +V
Sbjct: 300 FDVTAMVHGERAAQQAIAASAALFGRGAFEDLAESTLVAVTAELDIATISVGSPVVDALV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
           +AG   S   ARR +      INN  +S+ +             + L  GKK
Sbjct: 360 EAGLVQSKAAARRAITEGGASINNVRVSDVEAVFTEDQLLHGAWVILRRGKK 411


>gi|257466034|ref|ZP_05630345.1| tyrosyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563]
 gi|315917191|ref|ZP_07913431.1| tyrosyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563]
 gi|313691066|gb|EFS27901.1| tyrosyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563]
          Length = 402

 Score =  486 bits (1252), Expect = e-135,   Method: Composition-based stats.
 Identities = 179/410 (43%), Positives = 248/410 (60%), Gaps = 12/410 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +   +L ERG++ Q ++  E+  L  +  VT YIG+D TA SLH GH   +M +  +QK 
Sbjct: 3   NVFHVLQERGYLKQFTHEEEIKALLEKEKVTFYIGFDPTADSLHVGHFIAMMFMAHMQKY 62

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI+L+GGGT +IGDPS R + R MM  + +Q NI+ IK     FI +  GK  A++ 
Sbjct: 63  GHRPIALIGGGTGMIGDPSGRTDMRTMMTRETVQHNIDCIKKQMEKFIDFSDGK--AILA 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  + YI+ +R+IGS FSVNRML+ E  +SR+  E  LSFLEFNYM++Q YDF+ 
Sbjct: 121 NNADWLWDLNYIEFIRDIGSHFSVNRMLAAECFKSRM--ENGLSFLEFNYMLMQGYDFLV 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L K Y C L++GG DQW N+I G++L  + +    FA+T  LLT   G KMGKT  GA+W
Sbjct: 179 LNKKYGCVLELGGDDQWSNMIAGVELIRKKEQKSAFAMTCTLLTNKEGKKMGKTAKGALW 238

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           L+ E TSPY F+QYWRN+DDADV      LT +PM E+ R+   Q + INEAKK++A EI
Sbjct: 239 LDPEKTSPYEFYQYWRNVDDADVEKCLSLLTFVPMEEVRRLVSFQDERINEAKKVLAFEI 298

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
           T M+HG EEA K+  AA   F            ++ K EVS G  LL ++V+     + +
Sbjct: 299 TKMIHGEEEALKSQKAAEALFSGGAD-----LTTVPKLEVSIGEELLNVLVENKVLKTKS 353

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI-ICH 415
           E RR ++  A+ + N  +S+    I    F  +G+  L  GKK    +  
Sbjct: 354 EGRRLMQQGAMTLENEKMSDPAYVITGDSF--SGDALLKLGKKKFYQLVR 401


>gi|183982502|ref|YP_001850793.1| tyrosyl-tRNA synthase, TyrS [Mycobacterium marinum M]
 gi|183175828|gb|ACC40938.1| tyrosyl-tRNA synthase, TyrS [Mycobacterium marinum M]
          Length = 430

 Score =  486 bits (1251), Expect = e-135,   Method: Composition-based stats.
 Identities = 150/432 (34%), Positives = 230/432 (53%), Gaps = 16/432 (3%)

Query: 1   MPAFKSD---FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQL 57
           M +  S     L  L  RG I Q ++   L     +  +T Y G+D TA+SLHAGHL  L
Sbjct: 1   MSSNSSGSAGILDELGWRGLIAQSTDLDALAADVQRPPLTVYAGFDPTAASLHAGHLVPL 60

Query: 58  MLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG 117
           + L   Q+ GH+PI L GG T +IGDP    E R +  +  +    E+I+G    F+ + 
Sbjct: 61  LALRRFQRAGHRPIVLAGGATGMIGDPRDIGE-RSLNDADTVANWTERIRGQLERFVDFD 119

Query: 118 TGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYM 177
              T A++ NN  W  ++  ++ LR++G  FSVN ML  +++R RL+  + +S+ EF+YM
Sbjct: 120 GSPTGAIVENNLEWTAAMSTVEFLRDVGKHFSVNVMLDRDTIRRRLE-GEGISYTEFSYM 178

Query: 178 ILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
           +LQA D+VEL + + C LQ+GGSDQWGNII G+ L  +     + ALT PL+T A GTK 
Sbjct: 179 LLQANDYVELHRRHGCTLQIGGSDQWGNIIAGVRLVRQKSGAAVHALTVPLVTAADGTKF 238

Query: 238 GKT-LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKE 294
           GK+   G++WL+ EMTSPY ++QY+ N  DADV+ + +  T L   E+  + +   +   
Sbjct: 239 GKSTGGGSLWLDPEMTSPYAWYQYFVNTADADVIRYLRWFTFLVAEELTELEQATAERPH 298

Query: 295 INEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQ--------HMPTISISKDEV 346
              A++ +A E+TT+VHG    E    A+   F     S+         +   SI++ E 
Sbjct: 299 QRAAQRRLAAELTTLVHGEAATEAVEHASRALFGHGELSRLDEATLGAALRETSIAELEP 358

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
               G++ L+V  G + S   ARR +    + +NN  +  ++   +  DF     + L  
Sbjct: 359 GTPDGIVDLLVATGLSASKGAARRTIGEGGVSVNNIRVETDEWVPQTSDFLHGRWLVLRR 418

Query: 407 GKKNHIICHLCG 418
           GK+N       G
Sbjct: 419 GKRNIAGVERVG 430


>gi|319639345|ref|ZP_07994096.1| tyrosyl-tRNA synthetase [Neisseria mucosa C102]
 gi|317399529|gb|EFV80199.1| tyrosyl-tRNA synthetase [Neisseria mucosa C102]
          Length = 431

 Score =  486 bits (1251), Expect = e-135,   Method: Composition-based stats.
 Identities = 155/427 (36%), Positives = 229/427 (53%), Gaps = 21/427 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            +  L  RG I Q ++   LD L ++  ++ Y G+D TA SLH GHL  ++ L   Q+ G
Sbjct: 3   VIKDLQSRGLIAQTTDIEALDALLNEQKISLYCGFDPTADSLHIGHLLPVLALRRFQQAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H PI+L+GG T +IGDPSF+   R +  ++ +   +E I+   + F+ +  G   A+M N
Sbjct: 63  HTPIALVGGATGMIGDPSFKATERSLNSAETVAGWVESIRNQLTPFLSF-EGDNAAIMAN 121

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYDFVE 186
           N  W  S+  +D LR+IG  FSVN ML+ ESV+ R++R+   +SF EF Y +LQ YDF E
Sbjct: 122 NADWFGSMNCLDFLRDIGKHFSVNAMLNKESVKQRIERDDVGISFTEFAYSLLQGYDFAE 181

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L K +   L++GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  GA+W
Sbjct: 182 LNKRHGAVLEIGGSDQWGNITAGIDLTRRLHQKQVFGLTLPLVTKSDGTKFGKTEGGAVW 241

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINEAKKIIAT 304
           LN + TSPY F+Q+W  + DADV  F K  T L + EID +           EA++I+A 
Sbjct: 242 LNAKKTSPYQFYQFWLKVADADVYKFLKYFTFLSIEEIDAIEAKDKASGTKPEAQRILAE 301

Query: 305 EITTMVHGREEAEKAATAAMECFDMSI------HSQHMPTISISKDEVSRGMGLLTLIVK 358
           E+T ++HG E    A   +   F            + +    +   EVS  + ++  +VK
Sbjct: 302 EMTRLIHGEEALAAAQRISESLFAEDQSHLTESDFEQLALDGLPTFEVSESLNVVETLVK 361

Query: 359 AGFATSTNEARRHLKSNAIKINNSIIS-----------NEKLQIKLQDFDSTGNIKLSFG 407
            G A+S  EAR  + S A+ +N                ++   +  +         +  G
Sbjct: 362 TGLASSNKEARGFVNSKAVLLNGKPAEANNPNHAAEKPDDAYMLTDEHKRFGKYTIVRRG 421

Query: 408 KKNHIIC 414
           K+NH + 
Sbjct: 422 KRNHALL 428


>gi|309378318|emb|CBX23064.1| unnamed protein product [Neisseria lactamica Y92-1009]
          Length = 431

 Score =  486 bits (1251), Expect = e-135,   Method: Composition-based stats.
 Identities = 155/427 (36%), Positives = 226/427 (52%), Gaps = 21/427 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            +  L  RG I Q ++   LD L ++  +  Y G+D TA SLH GHL  ++ L   Q+ G
Sbjct: 3   VIQDLQSRGLIAQTTDIEALDALLNEQKIALYCGFDPTADSLHIGHLLPVLALRRFQQAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H PI+L+GG T +IGDPSF+   R +  ++ +   +E I+   + F+ +  G   A+M N
Sbjct: 63  HTPIALVGGATGMIGDPSFKAVERSLNSAETVAGWVESIRSQLTPFLSF-EGGNAAIMAN 121

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDFVE 186
           N  W   +  +D LR+IG  FSVN ML+ ESV+ R+ R    +SF EF Y +LQ YDF E
Sbjct: 122 NADWFGKMNCLDFLRDIGKHFSVNAMLNKESVKQRIDRDGAGISFTEFAYSLLQGYDFAE 181

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L K +   L++GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  GA+W
Sbjct: 182 LNKRHGAVLEIGGSDQWGNITAGIDLTRRLHQKQVFGLTLPLVTKSDGTKFGKTEGGAVW 241

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINEAKKIIAT 304
           LN + TSPY F+Q+W  + DADV  F K  T L + EID +           EA++I+A 
Sbjct: 242 LNAKKTSPYQFYQFWLKVADADVYKFLKYFTFLSIEEIDAVEAKDKASGSKPEAQRILAE 301

Query: 305 EITTMVHGREEAEKAATAAMECFDMSI------HSQHMPTISISKDEVSRGMGLLTLIVK 358
           E+T ++HG    + A   +   F            + +    +   EVS G+ ++  +VK
Sbjct: 302 EMTRLIHGEAALQAAQRISESLFAEDQSRLTESDFEQLALDGLPAFEVSDGINVVEALVK 361

Query: 359 AGFATSTNEARRHLKSNAIKINNSIIS-----------NEKLQIKLQDFDSTGNIKLSFG 407
            G A+S  EAR  + S A+ +N                ++   +  +         L  G
Sbjct: 362 TGLASSNKEARGFVNSKAVLLNGKPAEANNPNHAAERPDDACLLTDEHKRFGKYTILRRG 421

Query: 408 KKNHIIC 414
           K+NH + 
Sbjct: 422 KRNHALL 428


>gi|291558304|emb|CBL35421.1| tyrosyl-tRNA synthetase [Eubacterium siraeum V10Sc8a]
          Length = 404

 Score =  486 bits (1251), Expect = e-135,   Method: Composition-based stats.
 Identities = 175/405 (43%), Positives = 254/405 (62%), Gaps = 10/405 (2%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L ERG I Q++N  E+  + ++G  T YIG+D TA SLH GH   L L+  LQ  G
Sbjct: 3   LYEELIERGLIAQVTNEEEISKMINEGKATFYIGFDPTADSLHVGHFMALCLMKRLQMAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           +KPI+L+GGGT +IGDPS + + R+M+  ++I+ NI   K   S FI +  GK  AL++N
Sbjct: 63  NKPIALLGGGTGMIGDPSGKTDMRKMLTKEDIEHNIACFKKQMSRFIDFSDGK--ALLVN 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL ++ Y+D+LRE+G+ FSVN+MLS E  + R++R   LSFLEFNYMI+Q+YDF +L
Sbjct: 121 NADWLLNLNYVDVLREVGACFSVNKMLSAECYKQRMER--GLSFLEFNYMIMQSYDFYKL 178

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            K+Y C +Q GG DQW N++ G +L  +       A+T  LL  + G KMGKT  GA+WL
Sbjct: 179 YKDYGCNMQFGGDDQWSNMLGGTELIRKKLGKDAHAMTITLLLNSEGKKMGKTEKGAVWL 238

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           + E TSP+ F+QYWRN+ DADV+   K LT LP+ +I  M   +G ++N+AK+I+A E+T
Sbjct: 239 DPEKTSPFEFFQYWRNVADADVMKCIKMLTFLPLEQIREMESWEGAQLNKAKEILAYELT 298

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTN 366
            +VHG EEAEKA  AA E F     S  MPT  +  + V+ G +G+L  +V +    S  
Sbjct: 299 KLVHGEEEAEKALAAAKELFGGKGVSGDMPTAVMPAELVNDGKIGILDALVASKLCPSKR 358

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           EAR ++    I +N+  +++    I++ +F       +  GKK++
Sbjct: 359 EARTNVTGGGISVNDEKVTDPAAMIEIGEFA-----VIKKGKKSY 398


>gi|261401574|ref|ZP_05987699.1| tyrosine--tRNA ligase [Neisseria lactamica ATCC 23970]
 gi|269208346|gb|EEZ74801.1| tyrosine--tRNA ligase [Neisseria lactamica ATCC 23970]
          Length = 431

 Score =  486 bits (1251), Expect = e-135,   Method: Composition-based stats.
 Identities = 154/427 (36%), Positives = 226/427 (52%), Gaps = 21/427 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            +  L  RG I Q ++   LD L ++  +  Y G+D TA SLH GHL  ++ L   Q+ G
Sbjct: 3   VIQDLQSRGLIAQTTDIEALDALLNEQKIALYCGFDPTADSLHIGHLLPVLALRRFQQAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H PI+L+GG T +IGDPSF+   R +  ++ +   +E I+   + F+ +  G   A+M N
Sbjct: 63  HTPIALVGGATGMIGDPSFKAAERSLNSAETVAGWVESIRSQLTPFLSF-EGGNAAIMAN 121

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDFVE 186
           N  W   +  +D LR+IG  FSVN ML+ ESV+ R+ R    +SF EF Y +LQ YDF E
Sbjct: 122 NADWFGKMNCLDFLRDIGKHFSVNAMLNKESVKQRIDRDGAGISFTEFAYSLLQGYDFAE 181

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L K +   L++GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  GA+W
Sbjct: 182 LNKRHGAVLEIGGSDQWGNITAGIDLTRRLHQKQVFGLTLPLVTKSDGTKFGKTEGGAVW 241

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINEAKKIIAT 304
           LN + TSPY F+Q+W  + DADV  F K  T L + EID +           EA++I+A 
Sbjct: 242 LNAKKTSPYQFYQFWLKVADADVYKFLKYFTFLSVEEIDAVEAKDKASGSKPEAQRILAE 301

Query: 305 EITTMVHGREEAEKAATAAMECFDMSI------HSQHMPTISISKDEVSRGMGLLTLIVK 358
           E+T ++HG E    A   +   F            + +    +   EVS G+ ++  +VK
Sbjct: 302 EMTRLIHGEEALAAAQRISESLFAEDQSRLTESDFEQLALDGLPAFEVSDGINVVEALVK 361

Query: 359 AGFATSTNEARRHLKSNAIKINNSIIS-----------NEKLQIKLQDFDSTGNIKLSFG 407
            G A+S  EAR  + + A+ +N                ++   +  +         +  G
Sbjct: 362 TGLASSNKEARGFVNAKAVLLNGKPAEANNPNHAAERPDDACLLTEEHKRFGKYTIIRRG 421

Query: 408 KKNHIIC 414
           K+NH + 
Sbjct: 422 KRNHALL 428


>gi|281490928|ref|YP_003352908.1| Tyrosyl-tRNA synthetase [Lactococcus lactis subsp. lactis KF147]
 gi|281374686|gb|ADA64206.1| Tyrosyl-tRNA synthetase [Lactococcus lactis subsp. lactis KF147]
          Length = 419

 Score =  486 bits (1251), Expect = e-135,   Method: Composition-based stats.
 Identities = 144/421 (34%), Positives = 225/421 (53%), Gaps = 18/421 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L  RG + Q ++   L    ++ +V+ Y+GYD TA SLH G+L Q++ +  LQ  
Sbjct: 2   NIFDELKARGLVFQTTDEAALSKALTEDMVSYYVGYDPTADSLHLGNLVQILTMKRLQMA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP +L+GG T +IGDPSF+D  R +     + +   KI+     F+ +  G+  A M 
Sbjct: 62  GHKPYALVGGATGLIGDPSFKDSERSLQTKDTVTKWSGKIRSQLERFLDFENGENKAEMT 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W  ++ +ID LR++G  F+VN M+S +SV+SR++    +S+ EF Y I+Q YDF E
Sbjct: 122 NNYNWFENLTFIDFLRDVGKHFTVNYMISKDSVKSRMES--GISYTEFAYQIMQGYDFYE 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + ++  LQ+GGSDQWGN+  G +L  R    +   +T PL+T ++G K GK+   AIW
Sbjct: 180 LNQLHNVTLQLGGSDQWGNMTAGTELLRRKANKQGHVITIPLITDSTGKKFGKSEGNAIW 239

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIAT 304
           L+ + TSPY  +Q+W N+DDAD V   K  T L + EI  + +      +E  A+K++A 
Sbjct: 240 LDADKTSPYEMYQFWLNVDDADAVKMLKIFTFLSLEEIAEIEEQFEAARHERLAQKVLAR 299

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQ-----------HMPTISISKDEVSRGMGLL 353
           E+ ++VHG+   E+A   +   F      Q             P   ++ DE    + L+
Sbjct: 300 EVVSLVHGKAAYEQAVKTSEILFGGGDLRQLDAKSILTGLKAAPQHQVTDDE---DLTLV 356

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            L++ AG A S  +AR  + + AI IN   +      I   D        +  GKK + +
Sbjct: 357 ELLISAGIAPSKRQAREDITNGAIYINGERVQALDYVITDSDKIENRLTVIRRGKKKNFV 416

Query: 414 C 414
            
Sbjct: 417 L 417


>gi|227497666|ref|ZP_03927880.1| tyrosine--tRNA ligase [Actinomyces urogenitalis DSM 15434]
 gi|226832896|gb|EEH65279.1| tyrosine--tRNA ligase [Actinomyces urogenitalis DSM 15434]
          Length = 424

 Score =  486 bits (1251), Expect = e-135,   Method: Composition-based stats.
 Identities = 144/423 (34%), Positives = 222/423 (52%), Gaps = 19/423 (4%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +D L  L  RG I Q ++   L    ++G VT Y G+D TA SLH GHL  + ++  LQ 
Sbjct: 2   TDILDELQWRGLIAQHTDIDALRAALNEGSVTFYCGFDPTAPSLHHGHLVAVKVMRHLQM 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH P++L+GG T +IGDP  + E R +     +      ++    + + +  G   A +
Sbjct: 62  AGHHPLALVGGATGLIGDPRAKGE-RSLNTKDVVAGWARSLQAQLENLLDF-EGDNPARI 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  W   +  +D LR++G  F +  MLS + V  RL  E+ +SF EF+Y ILQA D++
Sbjct: 120 VNNLDWTGQMTAVDFLRDLGKHFRMGTMLSKDIVARRLASEEGISFTEFSYQILQANDYL 179

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           EL + Y C L++GG+DQWGN++ G+DL  +++   +  +T+PL+T A GTK GKT  GAI
Sbjct: 180 ELFRRYGCTLEVGGNDQWGNLVGGMDLIHKVEGESVHVMTNPLITKADGTKFGKTEGGAI 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIA 303
           WLN +M SPY F+Q+W  +DD DVV F K  T L   EI+R+ +         EA+K++A
Sbjct: 240 WLNPQMLSPYAFYQFWLRVDDVDVVRFLKVFTFLDREEIERLERATQDNPKAREAQKVLA 299

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQ-----------HMPTISISKDEVSRGMGL 352
            E+TT VHG    E A  A    +     S             +PT  +          +
Sbjct: 300 REVTTWVHGAAAVESAEAATQALWGRGELSDLDEATVLQATADLPTAQLEVGRS----TI 355

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           + L+V AG     + AR+ +      +NN  + +E   +   D  + G + +  G++N  
Sbjct: 356 VDLLVAAGLEKGRSAARKTVAGGGAYLNNVKVEDEDRVVTKDDLLAGGVVLVRKGRRNLA 415

Query: 413 ICH 415
           +  
Sbjct: 416 VAR 418


>gi|269956136|ref|YP_003325925.1| tyrosyl-tRNA synthetase [Xylanimonas cellulosilytica DSM 15894]
 gi|269304817|gb|ACZ30367.1| tyrosyl-tRNA synthetase [Xylanimonas cellulosilytica DSM 15894]
          Length = 419

 Score =  486 bits (1251), Expect = e-135,   Method: Composition-based stats.
 Identities = 142/417 (34%), Positives = 220/417 (52%), Gaps = 12/417 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +D L  L  RG + Q ++   L    ++G +T Y G+D TA SLH GHL QL++L  LQ 
Sbjct: 2   TDVLDELQWRGLVAQTTDEAALRSALAEGPITYYCGFDPTAPSLHHGHLVQLVVLRHLQL 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+ ++L+GG T +IGDP    E R +   + + +  E++K   S F+ +  G   AL+
Sbjct: 62  AGHRAVALVGGATGLIGDPRQSGE-RVLNTKETVADWTERLKAQVSRFLDF-EGDNPALL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  W+  +  ID LR++G  + +  ML+ ++V  RL+ E+ +SF EF+Y ILQ  DF+
Sbjct: 120 VNNLDWISELSAIDFLRDVGKHYRLGTMLAKDTVARRLRSEEGISFTEFSYQILQGIDFL 179

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           EL + +   LQ GG+DQWGN++ G++L  + +   +  LT+PL+T A GTK GKT  GA+
Sbjct: 180 ELHRRHGVSLQTGGNDQWGNLLSGVELIRKAEGTAVHVLTTPLITKADGTKFGKTEGGAV 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIA 303
           WL  +M SPY F+QYW N  D DVV + K  T     EI     A  +     EA++ +A
Sbjct: 240 WLAPDMMSPYAFYQYWLNAADEDVVGWLKIFTFRSREEIAELETAVRERPGAREAQRALA 299

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPT-------ISISKDEVSRGMGLLTLI 356
           +++TT+VHG    E    A+   F      + +           + +     G  ++   
Sbjct: 300 SDVTTLVHGAAATEAVIAASQALFGRGEL-RDLDEATLRGAVAELPRTTAKPGDLIVDAF 358

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
           V AG   S   ARR +      +NN  +++E+   +  D        L  GKK   +
Sbjct: 359 VGAGLVASKAAARRAIGEGGAYVNNVKVTSEEQVFEAGDLLHGRYAVLRRGKKTLAV 415


>gi|167751455|ref|ZP_02423582.1| hypothetical protein EUBSIR_02451 [Eubacterium siraeum DSM 15702]
 gi|167655701|gb|EDR99830.1| hypothetical protein EUBSIR_02451 [Eubacterium siraeum DSM 15702]
          Length = 404

 Score =  486 bits (1251), Expect = e-135,   Method: Composition-based stats.
 Identities = 176/405 (43%), Positives = 254/405 (62%), Gaps = 10/405 (2%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L ERG I Q++N  E+  + ++G  T YIG+D TA SLH GH   L L+  LQ  G
Sbjct: 3   LYEELIERGLIAQVTNEEEISKMINEGKATFYIGFDPTADSLHVGHFMALCLMKRLQMAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           +KPI+L+GGGT +IGDPS + + R+M+  ++I+ NI   K   S FI +  GK  AL++N
Sbjct: 63  NKPIALLGGGTGMIGDPSGKTDMRKMLTKEDIEHNIACFKKQMSRFIDFSDGK--ALLVN 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL S+ Y+D+LRE+G+ FSVN+MLS E  + R++R   LSFLEFNYMI+Q+YDF +L
Sbjct: 121 NADWLLSLNYVDVLREVGACFSVNKMLSAECYKQRMER--GLSFLEFNYMIMQSYDFYKL 178

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            K+Y C +Q GG DQW N++ G +L  +       A+T  LL  + G KMGKT  GA+WL
Sbjct: 179 YKDYGCNMQFGGDDQWSNMLGGTELIRKKLGKDAHAMTITLLLNSEGKKMGKTEKGAVWL 238

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           + E TSP+ F+QYWRN+ DADV+   K LT LP+ +I  M   +G ++N+AK+I+A E+T
Sbjct: 239 DPEKTSPFEFFQYWRNVADADVMKCIKMLTFLPLEQIREMESWEGAQLNKAKEILAYELT 298

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTN 366
            +VHG EEAEKA  AA E F     S  MPT  +  + V+ G +G+L  +V +    S  
Sbjct: 299 KLVHGEEEAEKALAAAKELFGGKGVSGDMPTAVMPAELVNDGKIGILDALVASKLCPSKR 358

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           EAR ++    I +N+  +++    I++ +F       +  GKK++
Sbjct: 359 EARTNVTGGGISVNDEKVTDPAAMIEIGEFA-----VIKKGKKSY 398


>gi|297561982|ref|YP_003680956.1| tyrosyl-tRNA synthetase [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
 gi|296846430|gb|ADH68450.1| tyrosyl-tRNA synthetase [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
          Length = 432

 Score =  486 bits (1251), Expect = e-135,   Method: Composition-based stats.
 Identities = 151/425 (35%), Positives = 244/425 (57%), Gaps = 22/425 (5%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +D +  L  RG + Q ++   L    + G +T Y G+D TA SLH GHLTQ++ L   Q+
Sbjct: 2   TDIIDELQWRGLLAQTTDLDALRKALADGPITLYCGFDPTAGSLHVGHLTQILTLARFQQ 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY-----GTGK 120
            GH+PI+L+GGGT +IGDP   +  R++   + ++  ++ + G  S+F+++         
Sbjct: 62  AGHRPIALVGGGTGLIGDPKP-NAERQLNSLETVRGWVDNLGGQLSAFLRFTPEGEQPEP 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           TDA++ NN  WL  I  I+LLR++G  FSVN+ML+ E+VRSRL   + +S+ EF+Y++LQ
Sbjct: 121 TDAVLANNADWLGEINAIELLRDVGKHFSVNQMLARETVRSRLD-GEGMSYTEFSYVLLQ 179

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT----PKLFALTSPLLTTASGTK 236
           +YD+V+L + + C LQ GGSDQWGNI  G+DL  R+       +   LT+ LLT A GTK
Sbjct: 180 SYDYVQLYRRFGCTLQTGGSDQWGNITAGLDLVRRMDGNEPHGQAHGLTTNLLTKADGTK 239

Query: 237 MGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKE 294
            GKT SG++WL+ E+TSPY F+Q+W N DD DVV + K  +     EI+ + +   +  +
Sbjct: 240 FGKTESGSVWLDPELTSPYAFYQFWFNADDRDVVRYLKTFSFRDRDEIEELERQTEERPQ 299

Query: 295 INEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQ------HMPTISISKDEVS- 347
              A++++A ++T +VHG EE  K   A++  F  +  S             + + EV  
Sbjct: 300 ARAAQRVLAEDLTVLVHGEEECRKVKEASLALFGRADLSDLDARTLEAALAEVPRAEVDG 359

Query: 348 --RGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLS 405
              G+ +     ++G   S + ARR ++     +NN  +++ +  ++ +D      + L 
Sbjct: 360 PVDGLLVTDAFARSGLTPSKSAARRAIQEGGAYVNNVKVTDVEAVLRPEDVLQGRFVVLR 419

Query: 406 FGKKN 410
            GK+N
Sbjct: 420 KGKRN 424


>gi|157803618|ref|YP_001492167.1| tyrosyl-tRNA synthetase [Rickettsia canadensis str. McKiel]
 gi|189029763|sp|A8EYE9|SYY_RICCK RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|157784881|gb|ABV73382.1| tyrosyl-tRNA synthetase [Rickettsia canadensis str. McKiel]
          Length = 411

 Score =  486 bits (1251), Expect = e-135,   Method: Composition-based stats.
 Identities = 189/409 (46%), Positives = 278/409 (67%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           F+     +G+ HQ +N   L  +  +  + AYIG+D TA+SLH G L Q+M+L  LQ+ G
Sbjct: 3   FIKEFRNKGYFHQCTNLDRLTSITKETKIAAYIGFDCTATSLHIGSLMQIMILRLLQQHG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKPI ++GGGTS IGDP+++DE+R+++  +EI +N E IK   S FIK+G   +DA+ML+
Sbjct: 63  HKPIVIIGGGTSKIGDPTWKDEARKILSKEEIAKNAEGIKKSLSKFIKFGEESSDAIMLD 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL S+ Y+D LR+ GS+FSVNRML+ +SVR RL+REQ LSFLEFNYM+LQAYDF  L
Sbjct: 123 NSEWLDSLNYLDFLRDFGSYFSVNRMLTMDSVRLRLEREQHLSFLEFNYMLLQAYDFYYL 182

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
           +K Y+C LQ+GGSDQWGNI+ G+DL  ++ + ++F +T+PLLTT+SG KMGKT +GA+WL
Sbjct: 183 SKYYNCSLQLGGSDQWGNIVIGVDLIRKISSKEVFGMTTPLLTTSSGAKMGKTAAGAVWL 242

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           N+++ SPY+++QYWRN +DADV+ FAK  + L   E  +   L  ++IN AKK +A E+T
Sbjct: 243 NEDLLSPYDYYQYWRNCEDADVIRFAKLFSELNTKEFTKFENLVAEDINAAKKQLAYELT 302

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
            + H  + A+ A   A++ F+     +++ T+ +  + +  G+    L  +AG ATS +E
Sbjct: 303 KLCHSEQAAKSALETAVKIFEQGEIDENLHTVVLELEILQAGINAYELFHEAGLATSKSE 362

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           AR+ ++    KIN+ +I +E + I          IKLS GKK HI+  +
Sbjct: 363 ARKLIRGKGAKINDKLIEDENMIINTNFLLDKSVIKLSAGKKRHILVRI 411


>gi|261363934|ref|ZP_05976817.1| tyrosine--tRNA ligase [Neisseria mucosa ATCC 25996]
 gi|288567948|gb|EFC89508.1| tyrosine--tRNA ligase [Neisseria mucosa ATCC 25996]
          Length = 431

 Score =  486 bits (1251), Expect = e-135,   Method: Composition-based stats.
 Identities = 155/427 (36%), Positives = 228/427 (53%), Gaps = 21/427 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            +  L  RG I Q ++   LD L ++  +  Y G+D TA SLH GHL  ++ L   Q+ G
Sbjct: 3   VIQDLQSRGLIAQTTDIEALDALLNEQKIALYCGFDPTADSLHIGHLLPVLALRRFQQAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H PI+L+GG T +IGDPSF+   R +  ++ +   +E I+     F+ +  G+  A+M N
Sbjct: 63  HTPIALVGGATGMIGDPSFKAVERSLNSAETVAGWVESIRNQLKPFLSF-EGENAAIMAN 121

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYDFVE 186
           N  W  S+  +D LR+IG  FSVN ML+ ESV+ R++R+   +SF EF Y +LQ YDF E
Sbjct: 122 NADWFGSMNCLDFLRDIGKHFSVNAMLNKESVKQRIERDDVGISFTEFAYSLLQGYDFAE 181

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L K +   L++GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  GA+W
Sbjct: 182 LNKRHGAVLEIGGSDQWGNITAGIDLTRRLNQKQVFGLTLPLVTKSDGTKFGKTEGGAVW 241

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINEAKKIIAT 304
           LN + TSPY F+Q+W  + DADV  F K  T L + EID +           EA++I+A 
Sbjct: 242 LNAKKTSPYQFYQFWLKVADADVYKFLKYFTFLSIEEIDAIEAKDKASGTKPEAQRILAE 301

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTLIVK 358
           E+T ++HG    + A   +   F     S      + +    +   EVS  + ++  +VK
Sbjct: 302 EMTRLIHGEAALQAAQRISESLFAEDQSSLTESDFEQLALDGLPAFEVSDDLNVVEALVK 361

Query: 359 AGFATSTNEARRHLKSNAIKINNSIIS-----------NEKLQIKLQDFDSTGNIKLSFG 407
            G A+S  EAR  + S A+ +N                ++   +            +  G
Sbjct: 362 TGLASSNKEARGFVNSKAVLLNGQAAELNNPNHAAERPDDAYLLTDAHKRFGKYTIVRRG 421

Query: 408 KKNHIIC 414
           K+NH + 
Sbjct: 422 KRNHALL 428


>gi|298370331|ref|ZP_06981647.1| tyrosine--tRNA ligase [Neisseria sp. oral taxon 014 str. F0314]
 gi|298281791|gb|EFI23280.1| tyrosine--tRNA ligase [Neisseria sp. oral taxon 014 str. F0314]
          Length = 432

 Score =  486 bits (1251), Expect = e-135,   Method: Composition-based stats.
 Identities = 155/429 (36%), Positives = 227/429 (52%), Gaps = 21/429 (4%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
              +  L  RG I Q ++   LD L ++  +  Y G+D TA SLH GHL  ++ L   Q+
Sbjct: 2   KSVIQDLQSRGLIAQTTDIEALDALLNEQKIALYCGFDPTADSLHIGHLLPVLALRRFQQ 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH PI+L+GG T +IGDPSF+   R +  ++ +   +E I+     F+ +  G+  A+M
Sbjct: 62  AGHTPIALVGGATGMIGDPSFKAVERSLNSAETVAGWVESIRNQLKPFLSF-EGENAAIM 120

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYDF 184
            NN  W  S+  +D LR+IG  FSVN ML+ ESV+ R++R+   +SF EF Y +LQ YDF
Sbjct: 121 ANNADWFGSMNCLDFLRDIGKHFSVNAMLNKESVKQRIERDDVGISFTEFAYSLLQGYDF 180

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
            EL K +   L++GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  GA
Sbjct: 181 AELNKRHGAVLEIGGSDQWGNITAGIDLTRRLNQKQVFGLTLPLVTKSDGTKFGKTEGGA 240

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINEAKKII 302
           +WLN + TSPY F+Q+W  + DADV  F K  T L + EID +           EA++I+
Sbjct: 241 VWLNAKKTSPYQFYQFWLKVADADVYKFLKYFTFLSIEEIDAIEAKDKASGTKPEAQRIL 300

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSI------HSQHMPTISISKDEVSRGMGLLTLI 356
           A E+T ++HG    + A   +   F            + +    +   EVS G  ++  +
Sbjct: 301 AEEMTRLIHGEAALQAAQRISESLFAEDQSHLTESDFEQLALDGLPAFEVSDGFNVVEAL 360

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIIS-----------NEKLQIKLQDFDSTGNIKLS 405
           VK G A+S  EAR  + S A+ +N                ++   +            + 
Sbjct: 361 VKTGLASSNKEARGFVNSKAVLLNGQAAELNNPNHAAERPDDAYLLTDAHKRFGKYTIVR 420

Query: 406 FGKKNHIIC 414
            GK+NH + 
Sbjct: 421 RGKRNHALL 429


>gi|256820458|ref|YP_003141737.1| tyrosyl-tRNA synthetase [Capnocytophaga ochracea DSM 7271]
 gi|256582041|gb|ACU93176.1| tyrosyl-tRNA synthetase [Capnocytophaga ochracea DSM 7271]
          Length = 431

 Score =  486 bits (1251), Expect = e-135,   Method: Composition-based stats.
 Identities = 156/431 (36%), Positives = 232/431 (53%), Gaps = 24/431 (5%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
            +F+  L  RG I  I    E      +G+  AY+G+D TA SLH G+L  +M+L   Q 
Sbjct: 2   KNFIEELRWRGMIQDIMPETE--QHLMEGLRAAYVGFDPTADSLHIGNLVSVMMLRHFQN 59

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD-AL 124
            GHKP +L+GG T +IGDPS +   R ++  + +  NI  IK   + F+ + +  ++ A 
Sbjct: 60  CGHKPYALVGGATGMIGDPSGKSVERNLLTEEVLAHNIAGIKKQLAKFLDFESQASNRAE 119

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL---KREQSLSFLEFNYMILQA 181
           ++NN  W+    ++  +R+IG   +VN M++ +SV+ R    +    +SF EF+Y +LQ 
Sbjct: 120 LVNNYDWMKEFSFLSFIRDIGKHITVNYMMAKDSVKKRFDPNENTDGMSFTEFSYQLLQG 179

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
           YDF+ L +  +  LQMGGSDQWGNI  G +L  R+   K +ALT PL+T A GTK GK+ 
Sbjct: 180 YDFLHLYREKNLTLQMGGSDQWGNITTGTELIRRIAGGKAYALTCPLITKADGTKFGKSE 239

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAK 299
            G +WL+ E TSPY F+QYW N  D D   + K  T L   EI+ +         +   +
Sbjct: 240 GGNVWLDPEKTSPYKFYQYWINTSDTDAERYIKIFTMLSKEEINSLIAQHTEAPHLRVLQ 299

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDE 345
             +A E+T +VHGREE EKA  A+   F  S  +                +P   IS  +
Sbjct: 300 NKLAEELTLLVHGREELEKAQKASQILFGNSTSADLRTLDEKTFLEVFDGVPQSEISATD 359

Query: 346 VSRGMGLLTLI-VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           ++ G+ ++ ++  K GF +S +EARR LK N+I +N   +  E  QI  +D      I L
Sbjct: 360 IAGGLDMIAILSAKTGFISSNSEARRALKENSISVNKEKV-GEDYQIGEKDLVDGKFILL 418

Query: 405 SFGKKNHIICH 415
             GKKN+ I  
Sbjct: 419 QRGKKNYFIVK 429


>gi|260172698|ref|ZP_05759110.1| tyrosyl-tRNA synthetase [Bacteroides sp. D2]
 gi|315920991|ref|ZP_07917231.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|313694866|gb|EFS31701.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 430

 Score =  485 bits (1250), Expect = e-135,   Method: Composition-based stats.
 Identities = 147/428 (34%), Positives = 225/428 (52%), Gaps = 22/428 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG +  I    E   L S+  VTAY+G D TA SLH GHL  +M+L   Q+ 
Sbjct: 2   NFVEELRWRGMLQDIMPGTE--ELLSKEQVTAYLGIDPTADSLHIGHLCGVMILRHFQRC 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG-KTDALM 125
           GHKP++L+GG T +IGDPS +   R ++  + ++ N   IK   + F+ + +     A +
Sbjct: 60  GHKPLALIGGATGMIGDPSGKSAERNLLDEETLRHNQACIKNQLAKFLDFESDVPNRAEL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQAYD 183
           +NN  W+    ++D +RE+G   +VN M++ +SV+ RL  E    LSF EF Y +LQ YD
Sbjct: 120 VNNYDWMKDFTFLDFVREVGKHITVNYMMAKDSVKRRLNGEARDGLSFTEFTYQLLQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ L +   C+LQMGGSDQWGNI  G +L  R    ++FALT PL+T A G K GKT SG
Sbjct: 180 FLHLYETKGCKLQMGGSDQWGNITTGAELIRRTNGGEVFALTCPLITKADGGKFGKTESG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKI 301
            IWL+   TSPY F+Q+W N+ D+D   + K  T++   EI+       +   +   +K 
Sbjct: 240 NIWLDPRYTSPYKFYQFWLNVSDSDAERYIKIFTSIEKEEIEALIAEHQEAPHLRLLQKR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDEVS 347
           +A E+T MVH  ++   A  A+   F  +                 + +P   IS+D ++
Sbjct: 300 LAKEVTVMVHSEDDYNAAVDASNILFGNATSEALRKLDEDTLLAVFEGVPQFEISRDALA 359

Query: 348 RGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+  + L V  A    S  E R+ ++   + +N   ++     I   D      + +  
Sbjct: 360 EGVKAVDLFVDNAAVFASKGEMRKLVQGGGVSLNKEKLAAFDEVITTADLLDEKYLLVQR 419

Query: 407 GKKNHIIC 414
           GKKN+ + 
Sbjct: 420 GKKNYYLL 427


>gi|160884937|ref|ZP_02065940.1| hypothetical protein BACOVA_02927 [Bacteroides ovatus ATCC 8483]
 gi|293368634|ref|ZP_06615241.1| tyrosine--tRNA ligase [Bacteroides ovatus SD CMC 3f]
 gi|156109972|gb|EDO11717.1| hypothetical protein BACOVA_02927 [Bacteroides ovatus ATCC 8483]
 gi|292636276|gb|EFF54761.1| tyrosine--tRNA ligase [Bacteroides ovatus SD CMC 3f]
          Length = 430

 Score =  485 bits (1250), Expect = e-135,   Method: Composition-based stats.
 Identities = 147/428 (34%), Positives = 225/428 (52%), Gaps = 22/428 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG +  I    E   L S+  VTAY+G D TA SLH GHL  +M+L   Q+ 
Sbjct: 2   NFVEELRWRGMLQDIMPGTE--ELLSKEQVTAYLGIDPTADSLHIGHLCGVMILRHFQRC 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG-KTDALM 125
           GHKP++L+GG T +IGDPS +   R ++  + ++ N   IK   + F+ + +     A +
Sbjct: 60  GHKPLALIGGATGMIGDPSGKSAERNLLDEETLRHNQACIKNQLAKFLDFESDVPNRAEL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQAYD 183
           +NN  W+    ++D +RE+G   +VN M++ +SV+ RL  E    LSF EF Y +LQ YD
Sbjct: 120 VNNYDWMKDFTFLDFVREVGKHITVNYMMAKDSVKRRLNGEARDGLSFTEFTYQLLQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ L +   C+LQMGGSDQWGNI  G +L  R    ++FALT PL+T A G K GKT SG
Sbjct: 180 FLHLYETKGCKLQMGGSDQWGNITTGAELIRRTNGGEVFALTCPLITKADGGKFGKTESG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKI 301
            IWL+   TSPY F+Q+W N+ D+D   + K  T++   EI+ +     K       +K 
Sbjct: 240 NIWLDPRYTSPYKFYQFWLNVSDSDAERYIKIFTSIEKEEIEALIAEHQKAPHLRLLQKR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDEVS 347
           +A E+T MVH  ++   A  A+   F  +                 + +P   IS+D ++
Sbjct: 300 LAKEVTVMVHSEDDYNAAVDASNILFGNATSEALRKLDEDTLLAVFEGVPQFEISRDVLA 359

Query: 348 RGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+  + L V  A    S  E R+ ++   + +N   ++     +   D      + +  
Sbjct: 360 EGVKAVDLFVDNAAVFASKGEMRKLVQGGGVSLNKEKLAAFDQVVTTADLLDEKYLLVQR 419

Query: 407 GKKNHIIC 414
           GKKN+ + 
Sbjct: 420 GKKNYYLL 427


>gi|229099524|ref|ZP_04230452.1| Tyrosyl-tRNA synthetase [Bacillus cereus Rock3-29]
 gi|228683820|gb|EEL37770.1| Tyrosyl-tRNA synthetase [Bacillus cereus Rock3-29]
          Length = 419

 Score =  485 bits (1250), Expect = e-135,   Method: Composition-based stats.
 Identities = 145/420 (34%), Positives = 216/420 (51%), Gaps = 13/420 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG ++Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  
Sbjct: 2   NIIDELEWRGAVNQQTDEEGLRKLVEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P+ L+GG T  IGDPS R   R++   + +Q N++ +         +G G ++  M+
Sbjct: 62  GHHPVILIGGATGTIGDPSGRQSERQLQTLEVVQHNVDALTAQMKKLFDFG-GNSEVKMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I  I+ LR  G  FS+N ML+ + V SRL  +  +SF EF Y ILQA DF  
Sbjct: 121 NNYDWTHEINIIEFLRNYGKNFSINSMLAKDIVASRL--DTGISFTEFTYQILQAMDFHH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKLFALTSPLLTTASGTKMGKTLSGA 244
           L    D +LQ+GGSDQWGNI  G+DL  +L+    K+F LT PLL  + GTK GK+ SGA
Sbjct: 179 LYTKEDVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSASGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKII 302
           +WL+ E T+P+ F+Q+W N DD DV+ + K  T L    ID +A     E    EA+K++
Sbjct: 239 VWLDAEKTTPFEFYQFWVNTDDRDVIKYLKYFTFLAKERIDELATKVEAEPHKREAQKVL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVS------RGMGLLTLI 356
             E+T  VHG E   +A       F   I S     I     E+           ++  +
Sbjct: 299 GEEMTKFVHGEEALLQAVKITSALFSGDIKSLTADEIEQGFKEMPTFQSSKETKNIVEWL 358

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V  G   S  +AR  + + AI +N   +++    + +++      I +  GKKN+ +  L
Sbjct: 359 VDLGIEPSRRQAREDINNGAISMNGEKVTDVGTDVTVENSFDGRFIIIRKGKKNYSLVKL 418


>gi|149184500|ref|ZP_01862818.1| tyrosyl-tRNA synthetase [Erythrobacter sp. SD-21]
 gi|148831820|gb|EDL50253.1| tyrosyl-tRNA synthetase [Erythrobacter sp. SD-21]
          Length = 409

 Score =  485 bits (1250), Expect = e-135,   Method: Composition-based stats.
 Identities = 206/414 (49%), Positives = 282/414 (68%), Gaps = 7/414 (1%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  ++S+ L +L ERG+IHQI++P  LD L ++ VV  YIG+D TA SLH G L Q+M+L
Sbjct: 1   MSTYQSELLRLLEERGYIHQITDPEGLDGLAARQVVPGYIGFDATAQSLHIGSLVQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             LQ+ GHKPI +MGGGT+ +GDPS +DESR+M+    I+ NI  I+ +F   + +G G 
Sbjct: 61  RRLQQAGHKPIVVMGGGTTKVGDPSGKDESRKMLNDAGIEANIAGIRTVFERLLTFGEGP 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           TDA+M+NN+ WL  + YI+LLR++G  F+VNRML+F+SV+ RL REQ L+FLEFNYMILQ
Sbjct: 121 TDAVMVNNDEWLSQLGYIELLRDVGPHFTVNRMLTFDSVKLRLDREQPLTFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDF ELA+ YDCRLQMGGSDQWGNI+ G++L  R+   +LF LT+PLLTTA G KMGKT
Sbjct: 181 AYDFRELAQRYDCRLQMGGSDQWGNIVNGMELARRMDGRELFGLTTPLLTTADGAKMGKT 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
            +GA+WLN+E    Y+FWQYWRN+DD DV  F +  T LP+ EI R+  L+G E+N+AK 
Sbjct: 241 AAGAVWLNEEQLPAYDFWQYWRNVDDRDVGRFLRLFTDLPLDEIARLESLEGAEVNQAKT 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+A E+T +V G E A+ AA  A E F      + +PT+++     + GM +  ++   G
Sbjct: 301 ILANEVTALVRGSEAADLAARTAAETFAGGGAGEDLPTLAVG----AEGMRIGAVLTGLG 356

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           F  S  EA+R L   A+K+    +++    +++ D       KLS GKK H I 
Sbjct: 357 FCASGKEAKRKLSEGAVKLGGEAVTDPGYLVEVAD---GAQAKLSLGKKKHAII 407


>gi|254804336|ref|YP_003082557.1| Tyrosyl-tRNA synthetase [Neisseria meningitidis alpha14]
 gi|254667878|emb|CBA03967.1| Tyrosyl-tRNA synthetase [Neisseria meningitidis alpha14]
          Length = 432

 Score =  485 bits (1250), Expect = e-135,   Method: Composition-based stats.
 Identities = 156/429 (36%), Positives = 226/429 (52%), Gaps = 21/429 (4%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
              +  L  R  I Q ++   LD L ++  +  Y G+D TA SLH GHL  ++ L   Q+
Sbjct: 2   KSVIQDLQSRDLIAQTTDIEALDALLNEQKIALYCGFDPTADSLHIGHLLPVLALRRFQQ 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH PI+L+GG T +IGDPSF+   R +  ++ +   +E I+   + F+ +  G   A+M
Sbjct: 62  AGHTPIALVGGATGMIGDPSFKAAERSLNSAETVAGWVESIRNQLTPFLSF-EGGNAAIM 120

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDF 184
            NN  W   +  +D LR+IG  FSVN ML+ ESV+ R+ R    +SF EF Y +LQ YDF
Sbjct: 121 ANNADWFGKMNCLDFLRDIGKHFSVNAMLNKESVKQRIDRDGAGISFTEFAYSLLQGYDF 180

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
            EL K +   L++GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  GA
Sbjct: 181 AELNKRHGAVLEIGGSDQWGNITAGIDLTRRLNQKQVFGLTLPLVTKSDGTKFGKTEGGA 240

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINEAKKII 302
           +WLN + TSPY F+Q+W  + DADV  F K  T L + EID +           EA++I+
Sbjct: 241 VWLNAKKTSPYQFYQFWLKVADADVYKFLKYFTFLSIEEIDAVEAKDQASGSKPEAQRIL 300

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTLI 356
           A E+T ++HG E    A   +   F     S      + +    +   EVS G+ ++  +
Sbjct: 301 AEEMTRLIHGEEALAAAQRISESLFAEDQSSLTESDFEQLALDGLPAFEVSDGINVVEAL 360

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIIS-----------NEKLQIKLQDFDSTGNIKLS 405
           VK G A+S  EAR  + S A+ +N                ++   +  +         L 
Sbjct: 361 VKTGLASSNKEARGFVNSKAVLLNGKPAEANNPNHAAERPDDACLLNGEHKRFGKYTILR 420

Query: 406 FGKKNHIIC 414
            GK+NH + 
Sbjct: 421 RGKRNHALL 429


>gi|118617300|ref|YP_905632.1| tyrosyl-tRNA synthetase [Mycobacterium ulcerans Agy99]
 gi|118569410|gb|ABL04161.1| tyrosyl-tRNA synthase, TyrS [Mycobacterium ulcerans Agy99]
          Length = 430

 Score =  485 bits (1249), Expect = e-135,   Method: Composition-based stats.
 Identities = 148/428 (34%), Positives = 229/428 (53%), Gaps = 13/428 (3%)

Query: 2   PAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
            +  +  L  L  RG I Q ++   L     +  +T Y G+D TA+SLHAGHL  L+ L 
Sbjct: 5   SSGSAGILDELGWRGLIAQSTDLDALAADAQRPPLTVYAGFDPTAASLHAGHLVPLLALR 64

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKT 121
             Q+ GH+PI L GG T +IGDP    E R +  +  +    E+I+G    F+ +    T
Sbjct: 65  RFQRAGHRPIVLAGGATGMIGDPRDIGE-RSLNDADTVANWTERIRGQLERFVDFDGSPT 123

Query: 122 DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA 181
            A++ NN  W  ++  ++ LR++G  FSVN ML  +++R RL+  + +S+ EF+YM+LQA
Sbjct: 124 GAIVENNLEWTAAMSTVEFLRDVGKHFSVNVMLDRDTIRRRLE-GEGISYTEFSYMLLQA 182

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT- 240
            D+VEL + + C LQ+GGSDQWGNII G+ L  +     + ALT PL+T A GTK GK+ 
Sbjct: 183 NDYVELHRRHGCTLQIGGSDQWGNIIAGVRLVRQKSGAAVHALTVPLVTAADGTKFGKST 242

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEA 298
             G++WL+ EMTSPY ++QY+ N  DADV+ + +  T L   E+  + +   +      A
Sbjct: 243 GGGSLWLDPEMTSPYAWYQYFVNTADADVIRYLRWFTFLVAEELTELEQATAERAHQRAA 302

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQ--------HMPTISISKDEVSRGM 350
           ++ +A E+TT+VHG    E    A+   F     S+         +   SI++ E     
Sbjct: 303 QRRLAAELTTLVHGEAATEAVEHASRALFGHGELSRLDEATLGAALRETSIAELEPGTPD 362

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
           G++ L+V  G + S   ARR +    + +NN  +  ++   +  DF     + L  GK+N
Sbjct: 363 GIVDLLVATGLSASKGAARRTIGEGGVSVNNIRVETDEWVPQTSDFLHGRWLVLRRGKRN 422

Query: 411 HIICHLCG 418
                  G
Sbjct: 423 IAGVERVG 430


>gi|227875725|ref|ZP_03993853.1| tyrosine--tRNA ligase [Mobiluncus mulieris ATCC 35243]
 gi|269976726|ref|ZP_06183702.1| tyrosyl-tRNA synthetase [Mobiluncus mulieris 28-1]
 gi|306819000|ref|ZP_07452717.1| tyrosine--tRNA ligase [Mobiluncus mulieris ATCC 35239]
 gi|307700327|ref|ZP_07637367.1| tyrosine--tRNA ligase [Mobiluncus mulieris FB024-16]
 gi|227843667|gb|EEJ53848.1| tyrosine--tRNA ligase [Mobiluncus mulieris ATCC 35243]
 gi|269935091|gb|EEZ91649.1| tyrosyl-tRNA synthetase [Mobiluncus mulieris 28-1]
 gi|304648193|gb|EFM45501.1| tyrosine--tRNA ligase [Mobiluncus mulieris ATCC 35239]
 gi|307614538|gb|EFN93767.1| tyrosine--tRNA ligase [Mobiluncus mulieris FB024-16]
          Length = 420

 Score =  485 bits (1249), Expect = e-135,   Method: Composition-based stats.
 Identities = 145/417 (34%), Positives = 227/417 (54%), Gaps = 19/417 (4%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           SD +  L  RG + Q ++   L    ++G VT Y G+D TA+SLH GHL QL+++  LQ 
Sbjct: 2   SDLIDELQWRGLVKQHTDLEALRAALNEGSVTFYCGFDPTAASLHHGHLVQLIMMRHLQL 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH PI+L+GG T +IGDP      R++   + + E +EK+K     F+ +  G   A M
Sbjct: 62  AGHHPIALVGGATGLIGDPRM-TAERQLQDKETVSEWVEKLKIQIGKFLDF-DGANPARM 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  W   +  IDLLR++G  F +  ML+ ++V  RLK E+ +S+ EF+Y ILQA DF+
Sbjct: 120 VNNRDWTEPLSAIDLLRDLGKHFRMGTMLAKDAVARRLKSEEGISYTEFSYQILQANDFL 179

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           +L + Y   L+ GG+DQWGN++ G+DL  +++   +  +T+PL+T + GTK GK+  GAI
Sbjct: 180 QLYRKYGATLETGGNDQWGNLVGGMDLIRKVEGADVHVMTTPLITKSDGTKFGKSEGGAI 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIA 303
           WL+ EM SPY F+Q+W N++DADV+ F K  T +   EI+ + +   +      A+K +A
Sbjct: 240 WLDPEMLSPYAFYQFWLNVEDADVIHFLKVFTFMSREEIEDLERQTAENPGARAAQKALA 299

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQ-----------HMPTISISKDEVSRGMGL 352
             +T +VHG EE  +   A+   F      +            +P   +   E      +
Sbjct: 300 EAVTALVHGAEETSRVKAASAALFGSGDLREVNGDTLVAATADLPHAPVKIGE----TTI 355

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
           L L+V +G       A+R + S    INN  +++E   +   D      +    GK+
Sbjct: 356 LDLLVTSGLEKGVGAAKRTIASGGAYINNEKVADEGRVVTQDDVLPGKVVLFRRGKR 412


>gi|116511241|ref|YP_808457.1| tyrosyl-tRNA synthetase [Lactococcus lactis subsp. cremoris SK11]
 gi|123025595|sp|Q031T7|SYY_LACLS RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|116106895|gb|ABJ72035.1| tyrosyl-tRNA synthetase [Lactococcus lactis subsp. cremoris SK11]
          Length = 419

 Score =  485 bits (1249), Expect = e-135,   Method: Composition-based stats.
 Identities = 144/421 (34%), Positives = 225/421 (53%), Gaps = 18/421 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L  RG + Q ++   L    ++ +V+ Y+GYD TA SLH G+L  ++ +  LQ  
Sbjct: 2   NIFDELKARGLVFQTTDEAALSKALTEDMVSYYVGYDPTADSLHLGNLVLILTMKRLQMA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP +L+GG T +IGDPSF+D  R +     + +   KI+     F+ +  G+  A M 
Sbjct: 62  GHKPYALVGGATGLIGDPSFKDSERSLQTKDTVTKWSGKIRSQLERFLDFENGENKAEMT 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W  ++ +ID LR++G  F+VN M+S +SV+SR++    +S+ EF Y I+Q YDF E
Sbjct: 122 NNYNWFENLTFIDFLRDVGKHFTVNYMISKDSVKSRMES--GISYTEFAYQIMQGYDFYE 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + ++  LQ+GGSDQWGN+  G +L  R    +   +T PL+T ++G K GK+   AIW
Sbjct: 180 LNQLHNVTLQLGGSDQWGNMTAGTELLRRKANKQGHVITIPLITDSTGKKFGKSEGNAIW 239

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIAT 304
           L+ + TSPY  +Q+W N+DDAD V   K  T L + EI  + +      +E  A+K++A 
Sbjct: 240 LDADKTSPYEMYQFWLNVDDADAVKMLKIFTFLSLEEIAEIEEQFEAARHERLAQKVLAR 299

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQ-----------HMPTISISKDEVSRGMGLL 353
           E+ ++VHG+E  E+A   +   F      Q             P   I+ DE    + L+
Sbjct: 300 EVVSLVHGKEAYEQAVKTSEILFGGGDLRQLDAKSILTGLKAAPQHQIAPDE---DLTLI 356

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            L++ AG A S  +AR  + + AI IN   +      +   D        +  GKK + +
Sbjct: 357 ELLISAGIAPSKRQAREDITNGAIYINGERVQELDYVLTDSDKIENRLTVIRRGKKKNFV 416

Query: 414 C 414
            
Sbjct: 417 L 417


>gi|145224097|ref|YP_001134775.1| tyrosyl-tRNA synthetase [Mycobacterium gilvum PYR-GCK]
 gi|315444434|ref|YP_004077313.1| tyrosyl-tRNA synthetase [Mycobacterium sp. Spyr1]
 gi|145216583|gb|ABP45987.1| tyrosyl-tRNA synthetase [Mycobacterium gilvum PYR-GCK]
 gi|315262737|gb|ADT99478.1| tyrosyl-tRNA synthetase [Mycobacterium sp. Spyr1]
          Length = 425

 Score =  485 bits (1249), Expect = e-135,   Method: Composition-based stats.
 Identities = 144/423 (34%), Positives = 228/423 (53%), Gaps = 13/423 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D L  L  RG I Q ++   L  + + G  T Y G+D TA SLHAGHL  L+ L   Q+ 
Sbjct: 5   DILDDLEWRGLIAQSTDREALGEMLAAGPATVYSGFDPTAPSLHAGHLIPLLTLRRFQQA 64

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI L GG T +IGDP    E R +  +  + +  ++I+G    F+++   +T A++ 
Sbjct: 65  GHRPIVLAGGATGMIGDPRDVGE-RTLNTADTVADWADRIRGQLERFVEFDDSETGAIVA 123

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           +N TW   +  I+ LR++G  FSVN ML  ++VR RL+    +S+ EF+YM+LQA D+VE
Sbjct: 124 DNLTWTSELSAIEFLRDVGKHFSVNVMLDRDTVRRRLE-GDGISYTEFSYMLLQANDYVE 182

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT-LSGAI 245
           L + Y C LQ+GGSDQWGNII G+ L  +     + A+T+PL+T + G K GK+   G++
Sbjct: 183 LHQRYGCTLQVGGSDQWGNIIAGVRLVRQKAGAAVHAMTTPLVTDSEGKKFGKSTGGGSL 242

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIA 303
           WL+ EMTSPY ++QY+ N  DADVV + +  T L   E+  +     +  +E  A++ +A
Sbjct: 243 WLDPEMTSPYAWYQYFINTADADVVPYLRWFTFLTAEELAELELATAERPHERAAQRRLA 302

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQ--------HMPTISISKDEVSRGMGLLTL 355
            E+T +VHG         A+   F     +          +   ++++ +      ++ L
Sbjct: 303 RELTNLVHGEAATAAVELASQALFGRGELADLDENTLAGAVREAAVAQLDPGGPDSIVDL 362

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +V  G + S   ARR +    + +NN+ ++ +    +  DF     + L  GK+N     
Sbjct: 363 LVATGLSASKGAARRTVAEGGVYVNNAKVTADDWVPQPSDFLHGRWLVLRRGKRNIAGVE 422

Query: 416 LCG 418
             G
Sbjct: 423 RVG 425


>gi|257452174|ref|ZP_05617473.1| tyrosyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
 gi|317058717|ref|ZP_07923202.1| tyrosyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
 gi|313684393|gb|EFS21228.1| tyrosyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
          Length = 402

 Score =  485 bits (1249), Expect = e-135,   Method: Composition-based stats.
 Identities = 179/410 (43%), Positives = 248/410 (60%), Gaps = 12/410 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +   +L ERG++ Q ++  E+  L  +  VT YIG+D TA SLH GH   +M +  +QK 
Sbjct: 3   NVFHVLQERGYLKQFTHEEEIKALLEKEKVTFYIGFDPTADSLHVGHFIAMMFMAHMQKY 62

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI+L+GGGT +IGDPS R + R MM  + +Q NI+ IK     FI +  GK  A++ 
Sbjct: 63  GHRPIALIGGGTGMIGDPSGRTDMRTMMTRETVQHNIDCIKKQMEKFIDFSDGK--AILA 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  + YI+ +R+IGS FSVNRML+ E  +SR+  E  LSFLEFNYM++Q YDF+ 
Sbjct: 121 NNADWLWDLNYIEFIRDIGSHFSVNRMLAAECFKSRM--ENGLSFLEFNYMLMQGYDFLV 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L K Y C L++GG DQW N+I G++L  + +    FA+T  LLT   G KMGKT  GA+W
Sbjct: 179 LNKKYGCVLELGGDDQWSNMIAGVELIRKKEQKSAFAMTCTLLTNKEGKKMGKTAKGALW 238

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           L+ E TSPY F+QYWRN+DDADV      LT +PM E+ R+   Q + INEAKK++A EI
Sbjct: 239 LDPEKTSPYEFYQYWRNVDDADVEKCLSLLTFVPMEEVRRLVSFQDERINEAKKVLAFEI 298

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
           T M+HG EEA K+  AA   F            ++ K EVS G  LL ++V+     + +
Sbjct: 299 TKMIHGEEEALKSQKAAEALFSGGAD-----LTTVPKLEVSIGEELLNVLVENKVLKTKS 353

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI-ICH 415
           E RR ++  A+ + N  +S+    I    F  +G+  L  GKK    +  
Sbjct: 354 EGRRLMQQGAMTLENVKMSDPAYVITEDSF--SGDALLKLGKKKFYQLVR 401


>gi|225077237|ref|ZP_03720436.1| hypothetical protein NEIFLAOT_02292 [Neisseria flavescens
           NRL30031/H210]
 gi|224951381|gb|EEG32590.1| hypothetical protein NEIFLAOT_02292 [Neisseria flavescens
           NRL30031/H210]
          Length = 431

 Score =  485 bits (1249), Expect = e-135,   Method: Composition-based stats.
 Identities = 155/427 (36%), Positives = 228/427 (53%), Gaps = 21/427 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            +  L  RG I Q ++   LD L ++  +  Y G+D TA SLH GHL  ++ L   Q+ G
Sbjct: 3   VIQDLQSRGLIAQTTDIEALDALLNEQKIALYCGFDPTADSLHIGHLLPVLALRRFQQAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H PI+L+GG T +IGDPSF+   R +  ++ +   +E I+     F+ +  G+  A+M N
Sbjct: 63  HTPIALVGGATGMIGDPSFKAAERSLNSAETVAGWVESIRNQLKPFLSF-EGENAAIMAN 121

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYDFVE 186
           N  W  S+  +D LR+IG  FSVN ML+ ESV+ R++R+   +SF EF Y +LQ YDF E
Sbjct: 122 NADWFGSMNCLDFLRDIGKHFSVNAMLNKESVKQRIERDDVGISFTEFAYSLLQGYDFAE 181

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L K +   L++GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  GA+W
Sbjct: 182 LNKRHGAVLEIGGSDQWGNITAGIDLTRRLHQKQVFGLTLPLVTKSDGTKFGKTEGGAVW 241

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINEAKKIIAT 304
           LN + TSPY F+Q+W  + DADV  F K  T L + EID +           EA++I+A 
Sbjct: 242 LNAKKTSPYQFYQFWLKVADADVYKFLKYFTFLSIEEIDAIEAKDKASGTKPEAQRILAE 301

Query: 305 EITTMVHGREEAEKAATAAMECFDMSI------HSQHMPTISISKDEVSRGMGLLTLIVK 358
           E+T ++HG E    A   +   F            + +    +   EVS  + ++  +VK
Sbjct: 302 EMTRLIHGEEALAAAQRISESLFAEDQSRLTESDFEQLALDGLPTFEVSESLNVVETLVK 361

Query: 359 AGFATSTNEARRHLKSNAIKINNSIIS-----------NEKLQIKLQDFDSTGNIKLSFG 407
            G A+S  EAR  + S A+ +N                ++   +  +         +  G
Sbjct: 362 TGLASSNKEARGFVNSKAVLLNGKPAEANNPNHAAEKPDDAYMLTDEHKRFGKYTIVRRG 421

Query: 408 KKNHIIC 414
           K+NH + 
Sbjct: 422 KRNHALL 428


>gi|325133486|gb|EGC56149.1| tyrosyl-tRNA synthetase [Neisseria meningitidis M13399]
 gi|325143735|gb|EGC66052.1| tyrosyl-tRNA synthetase [Neisseria meningitidis M01-240013]
 gi|325206751|gb|ADZ02204.1| tyrosyl-tRNA synthetase [Neisseria meningitidis M04-240196]
          Length = 431

 Score =  485 bits (1249), Expect = e-135,   Method: Composition-based stats.
 Identities = 155/427 (36%), Positives = 227/427 (53%), Gaps = 21/427 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            +  L  RG I Q ++   LD L ++  +  Y G+D TA SLH GHL  ++ L   Q+ G
Sbjct: 3   VIQDLQSRGLIAQTTDIEALDALLNEQKIALYCGFDPTADSLHIGHLLPVLALRRFQQAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H PI+L+GG T +IGDPSF+   R +  ++ +   +E I+   + F+ +  G   A+M N
Sbjct: 63  HTPIALVGGATGMIGDPSFKAAERSLNSAETVAGWVESIRNQLTPFLSF-EGGNAAIMAN 121

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDFVE 186
           N  W  S+  +D LR+IG  FSVN ML+ ESV+ R+ R    +SF EF Y +LQ YDF E
Sbjct: 122 NADWFGSMNCLDFLRDIGKHFSVNAMLNKESVKQRIDRDGAGISFTEFAYSLLQGYDFAE 181

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L K +   L++GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  GA+W
Sbjct: 182 LNKRHGAVLEIGGSDQWGNITAGIDLTRRLNQKQVFGLTLPLVTKSDGTKFGKTEGGAVW 241

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINEAKKIIAT 304
           LN + TSPY F+Q+W  + DADV  F K  T L + EID +           EA++I+A 
Sbjct: 242 LNAKKTSPYQFYQFWLKVADADVYKFLKYFTFLSIEEIDAIEAKDKASGTKPEAQRILAE 301

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTLIVK 358
           E+T ++HG    + A   +   F     S      + +    +   E+S G+  +  +VK
Sbjct: 302 EMTRLIHGEAALQAAQRISESLFAEDQSSLTESDFEQLALDGLPVFEISDGINAVEALVK 361

Query: 359 AGFATSTNEARRHLKSNAIKINNSIIS-----------NEKLQIKLQDFDSTGNIKLSFG 407
            G A+S  EAR  + + A+ +N                ++   +  +         L  G
Sbjct: 362 TGLASSNKEARGFVNAKAVLLNGKPAEANNPNHAAERPDDACLLTDEHKRFGKYTILRRG 421

Query: 408 KKNHIIC 414
           K+NH + 
Sbjct: 422 KRNHALL 428


>gi|227505064|ref|ZP_03935113.1| tyrosine--tRNA ligase [Corynebacterium striatum ATCC 6940]
 gi|227198352|gb|EEI78400.1| tyrosine--tRNA ligase [Corynebacterium striatum ATCC 6940]
          Length = 419

 Score =  485 bits (1248), Expect = e-135,   Method: Composition-based stats.
 Identities = 147/422 (34%), Positives = 230/422 (54%), Gaps = 15/422 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  LS RG I+Q ++   L   C +  +T Y G+D T  SLHAGHL  +++L   Q+ 
Sbjct: 2   NIIDELSWRGLINQSTDLEALRDEC-EKPITLYCGFDPTGDSLHAGHLVPMIMLRRFQQF 60

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI++ GG T  IGDP    E R M+  + I++N++ I+     F+ +  G   A+M+
Sbjct: 61  GHRPITVAGGATGTIGDPRDVGE-RSMLSMETIEQNLQAIQKQLRRFVDF-EGDNPAIMV 118

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W  ++  I+ LR++G  FS+N ML  ++V+ RL+ +  +S+ EF+YM+LQ+ D+V 
Sbjct: 119 NNADWTMNMSVIEFLRDVGKNFSLNTMLDRDTVKRRLESD-GISYTEFSYMLLQSNDYVH 177

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA-I 245
           L + YDC LQ+GG DQWGNI+ G+DL  R+   K+ ALT PL+T ASG K GK+  G  +
Sbjct: 178 LHREYDCVLQIGGGDQWGNIVFGVDLNRRMDNAKVHALTVPLVTDASGQKFGKSTGGGKL 237

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIA 303
           WL+ E TS Y+++QY+ N  D  V+ + +  T L   EI    K   +E     A++ +A
Sbjct: 238 WLDPEKTSAYSWYQYFLNAGDTVVIDYLRWFTFLTQEEIAEYEKAVAEEPFKRAAQRRLA 297

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQ--------HMPTISISKDEVSRGMGLLTL 355
            E+T +VHG +  +    AA   F  +  S          +   ++++         + L
Sbjct: 298 QEMTNLVHGEDATKAVELAAQALFGKAELSDLDEKTLAGALAETTVAEIGEGEPRTAVDL 357

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +V +G A S   ARR +K     INN  + +E  +   +D      + L  GKKN     
Sbjct: 358 LVASGLADSKGAARRTIKEGGAYINNQRVESEDWEPSSEDLLHGAWLVLRRGKKNFAGAR 417

Query: 416 LC 417
           L 
Sbjct: 418 LA 419


>gi|198274138|ref|ZP_03206670.1| hypothetical protein BACPLE_00275 [Bacteroides plebeius DSM 17135]
 gi|198273216|gb|EDY97485.1| hypothetical protein BACPLE_00275 [Bacteroides plebeius DSM 17135]
          Length = 430

 Score =  485 bits (1248), Expect = e-135,   Method: Composition-based stats.
 Identities = 145/428 (33%), Positives = 223/428 (52%), Gaps = 22/428 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG +H +    E   L  + +VTAY+G D TA SLH GHL  +M+L   Q+ 
Sbjct: 2   NFVDELRWRGMVHTMMPGTE--ELLEKEMVTAYLGIDPTADSLHIGHLCGVMMLRHFQRC 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG-TGKTDALM 125
           GHKP++L+GG T +IGDPS + + R ++  + ++ N E IK     F+ +       A +
Sbjct: 60  GHKPLALVGGATGMIGDPSGKSQERNLLDEETLRHNQECIKKQLGKFLDFESDAPNRAEL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQAYD 183
           +NN  W+    ++D  R +G   +VN M++ ESV+ RL  E    LSF EF Y +LQ YD
Sbjct: 120 VNNYDWMKDFSFLDFARTVGKHITVNYMMAKESVQKRLNGEARDGLSFTEFTYQLLQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ L +  +C+LQ+GGSDQWGNI  G +L  R    ++FALT PL+T A G K GKT SG
Sbjct: 180 FLHLYETKNCKLQLGGSDQWGNITTGAELIRRTNGGEVFALTCPLITKADGGKFGKTESG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKI 301
            IWL+   TSPY F+Q+W N+ D D   + K  T+L   EI+       Q   +   +K 
Sbjct: 240 NIWLDARYTSPYKFYQFWLNVSDEDAKRYIKIFTSLSKEEIEGLIAEHEQAPHLRVLQKR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDEVS 347
           +A E+T MVH   +   A  A+   F  +                 + +P   ++K ++ 
Sbjct: 300 LAKEVTIMVHSEADYNAAVEASGILFGNATSEALKKLDEDTLLSVFEGVPQFEVAKSDIE 359

Query: 348 RGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+  + L  + A    S  E R+ ++   + +N   ++    +I   D      + +  
Sbjct: 360 AGIKAVDLFTEKAAIFPSKGEMRKLVQGGGVSLNKEKLAAFDQEITTADLLDEKYLLVQR 419

Query: 407 GKKNHIIC 414
           GKKN+ + 
Sbjct: 420 GKKNYYLV 427


>gi|291531956|emb|CBK97541.1| tyrosyl-tRNA synthetase [Eubacterium siraeum 70/3]
          Length = 404

 Score =  485 bits (1248), Expect = e-135,   Method: Composition-based stats.
 Identities = 175/405 (43%), Positives = 254/405 (62%), Gaps = 10/405 (2%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L ERG I Q++N  E+  + ++G  T YIG+D TA SLH GH   L L+  LQ  G
Sbjct: 3   LYEELIERGLIAQVTNEEEISKMINEGKATFYIGFDPTADSLHVGHFMALCLMKRLQMAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           +KPI+L+GGGT +IGDPS + + R+M+  ++I+ NI   K   S FI +  GK  AL++N
Sbjct: 63  NKPIALLGGGTGMIGDPSGKTDMRKMLTKEDIEHNIACFKKQMSRFIDFSDGK--ALLVN 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL S+ Y+D+LRE+G+ FSVN+MLS E  + R++R   LSFLEFNYMI+Q+YDF +L
Sbjct: 121 NADWLLSLNYVDVLREVGACFSVNKMLSAECYKQRMER--GLSFLEFNYMIMQSYDFYKL 178

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            K+Y C +Q GG DQW N++ G +L  +       A+T  LL  + G KMGKT  GA+WL
Sbjct: 179 YKDYGCNMQFGGDDQWSNMLGGTELIRKKLGKDAHAMTITLLLNSEGKKMGKTEKGAVWL 238

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           + E TSP+ F+QYWRN+ DADV+   K LT LP+ +I  M   +G ++N+AK+++A E+T
Sbjct: 239 DPEKTSPFEFFQYWRNVADADVMKCIKMLTFLPLEQIREMESWEGAQLNKAKEMLAYELT 298

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTN 366
            +VHG EEAEKA  AA E F     S  MPT  +  + V+ G +G+L  +V +    S  
Sbjct: 299 KLVHGEEEAEKALAAAKELFGGKGVSGDMPTAVMPAELVNDGKIGILDALVASKLCPSKR 358

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           EAR ++    I +N+  +++    I++ +F       +  GKK++
Sbjct: 359 EARTNVTGGGISVNDEKVTDPAAMIEIGEFA-----VIKKGKKSY 398


>gi|261393182|emb|CAX50800.1| tyrosyl-tRNA synthetase (tyrosine--tRNA ligase; TyrRS) [Neisseria
           meningitidis 8013]
          Length = 431

 Score =  485 bits (1248), Expect = e-135,   Method: Composition-based stats.
 Identities = 155/427 (36%), Positives = 226/427 (52%), Gaps = 21/427 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            +  L  RG I Q ++   LD L ++  +  Y G+D TA SLH GHL  ++ L   Q+ G
Sbjct: 3   VIQDLQSRGLIAQTTDIEALDALLNEQKIALYCGFDPTADSLHIGHLLPVLALRRFQQAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H PI+L+GG T +IGDPSF+   R +  ++ +   +E I+   + F+ +  G   A+M N
Sbjct: 63  HTPIALVGGATGMIGDPSFKAAERSLNSAETVAGWVESIRNQLTPFLSF-EGGNAAIMAN 121

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDFVE 186
           N  W  S+  +D LR+IG  FSVN ML+ ESV+ R+ R    +SF EF Y +LQ YDF E
Sbjct: 122 NADWFGSMNCLDFLRDIGKHFSVNAMLNKESVKQRIDRDGAGISFTEFAYSLLQGYDFAE 181

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L K +   L++GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  GA+W
Sbjct: 182 LNKRHGAVLEIGGSDQWGNITAGIDLTRRLNQKQVFGLTLPLVTKSDGTKFGKTEGGAVW 241

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINEAKKIIAT 304
           LN + TSPY F+Q+W  + DADV  F K  T L + EID +           EA++I+A 
Sbjct: 242 LNAKKTSPYQFYQFWLKVADADVYKFLKYFTFLSIEEIDAIEAKDKASGTKPEAQRILAE 301

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTLIVK 358
           E+T ++HG    + A   +   F     S      + +    +   E+S G+  +  +VK
Sbjct: 302 EMTRLIHGEAALQAAQRISESLFAEDQSSLTESDFEQLALDGLPVFEISDGINAVEALVK 361

Query: 359 AGFATSTNEARRHLKSNAIKINNSIIS-----------NEKLQIKLQDFDSTGNIKLSFG 407
            G A S  EAR  + + A+ +N                ++   +  +         L  G
Sbjct: 362 TGLAASNKEARGFVNAKAVLLNGKPAEANNPNHAAERPDDACLLTDEHKRFGKYTILRRG 421

Query: 408 KKNHIIC 414
           K+NH + 
Sbjct: 422 KRNHALL 428


>gi|317056427|ref|YP_004104894.1| tyrosyl-tRNA synthetase [Ruminococcus albus 7]
 gi|315448696|gb|ADU22260.1| tyrosyl-tRNA synthetase [Ruminococcus albus 7]
          Length = 406

 Score =  485 bits (1248), Expect = e-135,   Method: Composition-based stats.
 Identities = 179/411 (43%), Positives = 262/411 (63%), Gaps = 12/411 (2%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
              L  RG I Q+++ +EL+ L + G  T YIG+D TA SLH GH   L L+  LQ  G+
Sbjct: 4   FEELKRRGLIAQMTDEKELEELINNGKATFYIGFDPTADSLHVGHFMALCLMKRLQMAGN 63

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           KPI+L+GGGT +IGDPS + + R+M+  + IQ N E  K   S FI +  GK  ALM+NN
Sbjct: 64  KPIALVGGGTGMIGDPSGKTDMRKMLTPETIQHNCECFKKQMSKFIDFSDGK--ALMVNN 121

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL ++ Y+D+LRE+G+ FSVN+ML+FE  + R++R   L+FLEFNYMI+Q+YDF  L 
Sbjct: 122 GDWLLNLNYVDVLREVGACFSVNKMLTFECYKQRMER--GLTFLEFNYMIMQSYDFYRLF 179

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
           ++Y C +Q GG DQW N++ G +L  +      +A+T  LL  + G KMGKT  GA+WL+
Sbjct: 180 QDYGCNMQFGGDDQWANMLGGTELIRKKLGKDAYAMTITLLLNSEGKKMGKTEKGAVWLD 239

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK-LQGKEINEAKKIIATEIT 307
            E TSPY+F+QYWRN+DDADV+   K LT +P+ +I+ M + ++G E N+AK+++A E+T
Sbjct: 240 AEKTSPYDFYQYWRNVDDADVIKCLKLLTFVPIEQIEEMEQHMEGAEYNKAKELLAFELT 299

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG--MGLLTLIVKAGFATST 365
            ++HG EEA+KA  AA   F     S  MP ++++ D+V     +G+L L+VK+G A S 
Sbjct: 300 KLIHGEEEAQKADAAAKAIFGGGADSADMPAVTLTADDVDENKQIGILNLLVKSGLAPSN 359

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            EARR ++ N I +N    ++ K  + L +      + +  GKK  +   L
Sbjct: 360 GEARRLVQQNGIAVNGEKFTDPKGMVDLSE-----QVIIKKGKKVFLKVVL 405


>gi|15672367|ref|NP_266541.1| tyrosyl-tRNA synthetase [Lactococcus lactis subsp. lactis Il1403]
 gi|81538453|sp|Q9CIH5|SYY_LACLA RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|12723257|gb|AAK04483.1|AE006275_7 tyrosyl-tRNA synthetase 1 [Lactococcus lactis subsp. lactis Il1403]
 gi|326405961|gb|ADZ63032.1| Tyrosyl-tRNA synthetase [Lactococcus lactis subsp. lactis CV56]
          Length = 419

 Score =  485 bits (1248), Expect = e-135,   Method: Composition-based stats.
 Identities = 143/421 (33%), Positives = 224/421 (53%), Gaps = 18/421 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L  RG + Q ++   L    ++ +V+ Y+GYD TA SLH G+L  ++ +  LQ  
Sbjct: 2   NIFDELKARGLVFQTTDEAALSKALTEDMVSYYVGYDPTADSLHLGNLVLILTMKRLQMA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP +L+GG T +IGDPSF+D  R +     + +   KI+     F+ +  G+  A M 
Sbjct: 62  GHKPYALVGGATGLIGDPSFKDSERSLQTKDTVTKWSGKIRSQLERFLDFENGENKAEMT 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W  ++ +ID LR++G  F+VN M+S +SV+SR++    +S+ EF Y I+Q YDF E
Sbjct: 122 NNYNWFENLTFIDFLRDVGKHFTVNYMISKDSVKSRMES--GISYTEFAYQIMQGYDFYE 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + ++  LQ+GGSDQWGN+  G +L  R    +   +T PL+T ++G K GK+   AIW
Sbjct: 180 LNQLHNVTLQLGGSDQWGNMTAGTELLRRKANKQGHVITIPLITDSTGKKFGKSEGNAIW 239

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIAT 304
           L+ + TSPY  +Q+W N+DDAD V   K  T L + EI  + +      +E  A+K++A 
Sbjct: 240 LDADKTSPYEMYQFWLNVDDADAVKMLKIFTFLSLEEIAEIEEQFEAARHERLAQKVLAR 299

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQ-----------HMPTISISKDEVSRGMGLL 353
           E+ ++VHG+   E+A   +   F      Q             P   ++ DE    + L+
Sbjct: 300 EVVSLVHGKAAYEQAVKTSEILFGGGDLRQLDAKSILTGLKAAPQHQVTDDE---DLTLV 356

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            L++ AG A S  +AR  + + AI IN   +      I   D        +  GKK + +
Sbjct: 357 ELLISAGIAPSKRQAREDITNGAIYINGERVQALDYVITDSDKIENRLTVIRRGKKKNFV 416

Query: 414 C 414
            
Sbjct: 417 L 417


>gi|241759449|ref|ZP_04757553.1| tyrosine--tRNA ligase [Neisseria flavescens SK114]
 gi|241320231|gb|EER56564.1| tyrosine--tRNA ligase [Neisseria flavescens SK114]
          Length = 432

 Score =  485 bits (1248), Expect = e-135,   Method: Composition-based stats.
 Identities = 155/429 (36%), Positives = 228/429 (53%), Gaps = 21/429 (4%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +  +  L  RG I Q ++   LD L ++  +  Y G+D TA SLH GHL  ++ L   Q+
Sbjct: 2   TSVIQDLQSRGLIAQTTDIEALDALLNEQKIALYCGFDPTADSLHIGHLLPVLALRRFQQ 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH PI+L+GG T +IGDPSF+   R +  ++ +   +E I+     F+ +  G+  A+M
Sbjct: 62  AGHTPIALVGGATGMIGDPSFKAVERSLNSAETVAGWVESIRNQLKPFLSF-EGENAAIM 120

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYDF 184
            NN  W  S+  +D LR+IG  FSVN ML+ ESV+ R++R+   +SF EF Y +LQ YDF
Sbjct: 121 ANNADWFGSMNCLDFLRDIGKHFSVNAMLNKESVKQRIERDDVGISFTEFAYSLLQGYDF 180

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
            EL K +   L++GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  GA
Sbjct: 181 AELNKRHGAVLEIGGSDQWGNITAGIDLTRRLHQKQVFGLTLPLVTKSDGTKFGKTEGGA 240

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINEAKKII 302
           +WLN + TSPY F+Q+W  + DADV  F K  T L + EID +           EA++I+
Sbjct: 241 VWLNAKKTSPYQFYQFWLKVADADVYKFLKYFTFLSIEEIDAIEAKDKASGTKPEAQRIL 300

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSI------HSQHMPTISISKDEVSRGMGLLTLI 356
           A E+T ++HG E    A   +   F            + +    +   EVS  + ++  +
Sbjct: 301 AEEMTRLIHGEEALAAAQRISESLFAEDQSHLTESDFEQLALDGLPTFEVSESLNVVETL 360

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIIS-----------NEKLQIKLQDFDSTGNIKLS 405
           VK G A+S  EAR  + S A+ +N                ++   +            + 
Sbjct: 361 VKTGLASSNKEARGFVNSKAVLLNGQAAELNNPNHAAERPDDAYLLTDAHKRFGKYTIVR 420

Query: 406 FGKKNHIIC 414
            GK+NH + 
Sbjct: 421 RGKRNHALL 429


>gi|15608827|ref|NP_216205.1| tyrosyl-tRNA synthetase [Mycobacterium tuberculosis H37Rv]
 gi|15841146|ref|NP_336183.1| tyrosyl-tRNA synthetase [Mycobacterium tuberculosis CDC1551]
 gi|31792875|ref|NP_855368.1| tyrosyl-tRNA synthetase [Mycobacterium bovis AF2122/97]
 gi|121637596|ref|YP_977819.1| tyrosyl-tRNA synthetase [Mycobacterium bovis BCG str. Pasteur
           1173P2]
 gi|148661486|ref|YP_001283009.1| tyrosyl-tRNA synthetase [Mycobacterium tuberculosis H37Ra]
 gi|148822896|ref|YP_001287650.1| tyrosyl-tRNA synthetase [Mycobacterium tuberculosis F11]
 gi|167969193|ref|ZP_02551470.1| tyrosyl-tRNA synthetase [Mycobacterium tuberculosis H37Ra]
 gi|215404008|ref|ZP_03416189.1| tyrosyl-tRNA synthetase [Mycobacterium tuberculosis 02_1987]
 gi|215411336|ref|ZP_03420144.1| tyrosyl-tRNA synthetase [Mycobacterium tuberculosis 94_M4241A]
 gi|215427012|ref|ZP_03424931.1| tyrosyl-tRNA synthetase [Mycobacterium tuberculosis T92]
 gi|215430581|ref|ZP_03428500.1| tyrosyl-tRNA synthetase [Mycobacterium tuberculosis EAS054]
 gi|215445876|ref|ZP_03432628.1| tyrosyl-tRNA synthetase [Mycobacterium tuberculosis T85]
 gi|218753397|ref|ZP_03532193.1| tyrosyl-tRNA synthetase [Mycobacterium tuberculosis GM 1503]
 gi|219557611|ref|ZP_03536687.1| tyrosyl-tRNA synthetase [Mycobacterium tuberculosis T17]
 gi|224990071|ref|YP_002644758.1| tyrosyl-tRNA synthase [Mycobacterium bovis BCG str. Tokyo 172]
 gi|253799272|ref|YP_003032273.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis KZN 1435]
 gi|254364529|ref|ZP_04980575.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis str.
           Haarlem]
 gi|254550698|ref|ZP_05141145.1| tyrosyl-tRNA synthetase [Mycobacterium tuberculosis '98-R604
           INH-RIF-EM']
 gi|260186642|ref|ZP_05764116.1| tyrosyl-tRNA synthetase [Mycobacterium tuberculosis CPHL_A]
 gi|260200753|ref|ZP_05768244.1| tyrosyl-tRNA synthetase [Mycobacterium tuberculosis T46]
 gi|260204958|ref|ZP_05772449.1| tyrosyl-tRNA synthetase [Mycobacterium tuberculosis K85]
 gi|289443146|ref|ZP_06432890.1| tyrosyl-tRNA synthetase [Mycobacterium tuberculosis T46]
 gi|289447303|ref|ZP_06437047.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis CPHL_A]
 gi|289554538|ref|ZP_06443748.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis KZN 605]
 gi|289569737|ref|ZP_06449964.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis T17]
 gi|289574357|ref|ZP_06454584.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis K85]
 gi|289745874|ref|ZP_06505252.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis 02_1987]
 gi|289750245|ref|ZP_06509623.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis T92]
 gi|289753779|ref|ZP_06513157.1| tyrosyl-tRNA synthetase [Mycobacterium tuberculosis EAS054]
 gi|289757799|ref|ZP_06517177.1| tyrosyl-tRNA synthetase [Mycobacterium tuberculosis T85]
 gi|289761844|ref|ZP_06521222.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis GM 1503]
 gi|297634241|ref|ZP_06952021.1| tyrosyl-tRNA synthetase [Mycobacterium tuberculosis KZN 4207]
 gi|297731228|ref|ZP_06960346.1| tyrosyl-tRNA synthetase [Mycobacterium tuberculosis KZN R506]
 gi|298525188|ref|ZP_07012597.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis 94_M4241A]
 gi|306775874|ref|ZP_07414211.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis SUMu001]
 gi|306779692|ref|ZP_07418029.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis SUMu002]
 gi|306784425|ref|ZP_07422747.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis SUMu003]
 gi|306788792|ref|ZP_07427114.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis SUMu004]
 gi|306793127|ref|ZP_07431429.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis SUMu005]
 gi|306797507|ref|ZP_07435809.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis SUMu006]
 gi|306803388|ref|ZP_07440056.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis SUMu008]
 gi|306807970|ref|ZP_07444638.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis SUMu007]
 gi|306967787|ref|ZP_07480448.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis SUMu009]
 gi|306971983|ref|ZP_07484644.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis SUMu010]
 gi|307079695|ref|ZP_07488865.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis SUMu011]
 gi|307084272|ref|ZP_07493385.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis SUMu012]
 gi|313658560|ref|ZP_07815440.1| tyrosyl-tRNA synthetase [Mycobacterium tuberculosis KZN V2475]
 gi|54039702|sp|P67612|SYY_MYCBO RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|54042059|sp|P67611|SYY_MYCTU RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|2326732|emb|CAB10946.1| Probable Tyrosyl-tRNA synthase tyrS (TYRRS) [Mycobacterium
           tuberculosis H37Rv]
 gi|13881365|gb|AAK45997.1| tyrosyl-tRNA synthetase [Mycobacterium tuberculosis CDC1551]
 gi|31618465|emb|CAD96383.1| Probable Tyrosyl-tRNA synthase tyrS (TYRRS) [Mycobacterium bovis
           AF2122/97]
 gi|121493243|emb|CAL71714.1| Probable Tyrosyl-tRNA synthase tyrS (TYRRS) [Mycobacterium bovis
           BCG str. Pasteur 1173P2]
 gi|134150043|gb|EBA42088.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis str.
           Haarlem]
 gi|148505638|gb|ABQ73447.1| tyrosyl-tRNA synthetase [Mycobacterium tuberculosis H37Ra]
 gi|148721423|gb|ABR06048.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis F11]
 gi|224773184|dbj|BAH25990.1| tyrosyl-tRNA synthase [Mycobacterium bovis BCG str. Tokyo 172]
 gi|253320775|gb|ACT25378.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis KZN 1435]
 gi|289416065|gb|EFD13305.1| tyrosyl-tRNA synthetase [Mycobacterium tuberculosis T46]
 gi|289420261|gb|EFD17462.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis CPHL_A]
 gi|289439170|gb|EFD21663.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis KZN 605]
 gi|289538788|gb|EFD43366.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis K85]
 gi|289543491|gb|EFD47139.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis T17]
 gi|289686402|gb|EFD53890.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis 02_1987]
 gi|289690832|gb|EFD58261.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis T92]
 gi|289694366|gb|EFD61795.1| tyrosyl-tRNA synthetase [Mycobacterium tuberculosis EAS054]
 gi|289709350|gb|EFD73366.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis GM 1503]
 gi|289713363|gb|EFD77375.1| tyrosyl-tRNA synthetase [Mycobacterium tuberculosis T85]
 gi|298494982|gb|EFI30276.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis 94_M4241A]
 gi|308215626|gb|EFO75025.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis SUMu001]
 gi|308327344|gb|EFP16195.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis SUMu002]
 gi|308330786|gb|EFP19637.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis SUMu003]
 gi|308334609|gb|EFP23460.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis SUMu004]
 gi|308338396|gb|EFP27247.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis SUMu005]
 gi|308342119|gb|EFP30970.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis SUMu006]
 gi|308345590|gb|EFP34441.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis SUMu007]
 gi|308349907|gb|EFP38758.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis SUMu008]
 gi|308354528|gb|EFP43379.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis SUMu009]
 gi|308358504|gb|EFP47355.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis SUMu010]
 gi|308362443|gb|EFP51294.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis SUMu011]
 gi|308366128|gb|EFP54979.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis SUMu012]
 gi|323719779|gb|EGB28893.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis CDC1551A]
 gi|326903303|gb|EGE50236.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis W-148]
 gi|328459024|gb|AEB04447.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis KZN 4207]
          Length = 424

 Score =  485 bits (1248), Expect = e-135,   Method: Composition-based stats.
 Identities = 146/422 (34%), Positives = 230/422 (54%), Gaps = 13/422 (3%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  LS RG I Q ++   L     +G +T Y G+D TA SLHAGHL  L+ L   Q+ G
Sbjct: 5   ILDELSWRGLIAQSTDLDTLAAEAQRGPMTVYAGFDPTAPSLHAGHLVPLLTLRRFQRAG 64

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+PI L GG T +IGDP    E R +  +  + E  E+I+G    F+ +      A++ N
Sbjct: 65  HRPIVLAGGATGMIGDPRDVGE-RSLNEADTVAEWTERIRGQLERFVDFDDSPMGAIVEN 123

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W  S+  I+ LR+IG  FSVN ML+ +++R RL   + +S+ EF+Y++LQA D+VEL
Sbjct: 124 NLEWTGSLSAIEFLRDIGKHFSVNVMLARDTIRRRLA-GEGISYTEFSYLLLQANDYVEL 182

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT-LSGAIW 246
            + + C LQ+GG+DQWGNII G+ L  +     + ALT PL+T A GTK GK+   G++W
Sbjct: 183 HRRHGCTLQIGGADQWGNIIAGVRLVRQKLGATVHALTVPLVTAADGTKFGKSTGGGSLW 242

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIAT 304
           L+ +MTSPY ++QY+ N  DADV+ + +  T L   E+  + +   Q  +   A++ +A+
Sbjct: 243 LDPQMTSPYAWYQYFVNTADADVIRYLRWFTFLSADELAELEQATAQRPQQRAAQRRLAS 302

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQ--------HMPTISISKDEVSRGMGLLTLI 356
           E+T +VHG         A+   F     ++         +   ++++ +     G++ L+
Sbjct: 303 ELTVLVHGEAATAAVEHASRALFGRGELARLDEATLAAALRETTVAELKPGSPDGIVDLL 362

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V +G + S   ARR +    + +NN  + NE+   +  DF     + L  GK++      
Sbjct: 363 VASGLSASKGAARRTIHEGGVSVNNIRVDNEEWVPQSSDFLHGRWLVLRRGKRSIAGVER 422

Query: 417 CG 418
            G
Sbjct: 423 IG 424


>gi|251795542|ref|YP_003010273.1| tyrosyl-tRNA synthetase [Paenibacillus sp. JDR-2]
 gi|247543168|gb|ACT00187.1| tyrosyl-tRNA synthetase [Paenibacillus sp. JDR-2]
          Length = 419

 Score =  484 bits (1247), Expect = e-135,   Method: Composition-based stats.
 Identities = 149/425 (35%), Positives = 218/425 (51%), Gaps = 21/425 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  R  I+Q ++   L  L S+  V+ Y G D T  S+H GHL   M+L   Q  
Sbjct: 2   NIIDELEWRDAINQQTDAEGLRELTSEKAVSLYCGVDPTGDSMHIGHLIPFMVLKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+P+ L+GG T  IGDPS R   R +   ++I+ N+E +            G  +  M+
Sbjct: 62  GHRPVILIGGATGTIGDPSGRTSERSLQTLEQIEANVEALGAQLRKLF-LTEGDNNMRMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I  I+ LR+ G  FS+N ML+ + V SRL+    +SF EF+Y ILQ+ DF+ 
Sbjct: 121 NNYDWTHKINVIEFLRDYGKNFSINTMLAKDVVSSRLES--GISFTEFSYQILQSLDFLH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKLFALTSPLLTTASGTKMGKTLSGA 244
           L +  D +LQ+GGSDQWGNI  G+DL  + +    K F LT PL+  A GTK GKT  GA
Sbjct: 179 LFREEDVQLQIGGSDQWGNITSGLDLIRKKEGSESKAFGLTIPLMLKADGTKFGKTAGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKII 302
           IWL+ E T+PY F+Q+W N DD DVV + K  T L   EI+ +A+    E    EA+K +
Sbjct: 239 IWLDPEKTTPYEFYQFWANTDDRDVVKYLKYFTFLSKEEIEGLAEKVATEPHKREAQKKL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGL 352
           A E+T  VH  E  ++A       F   I S          + MPT        +    +
Sbjct: 299 AEEMTRFVHSEELLQQALRITAALFSGDIKSLSADEIEQGFKEMPTFE----STNEAKNI 354

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           +  +V  G   S  +AR  + + AI +N   +++  L++  +       I +  GKK + 
Sbjct: 355 VDWLVDLGIEPSKRQAREDITNGAISMNGERVTDLTLEVSSEHAIGGRFIIIRKGKKKYS 414

Query: 413 ICHLC 417
           +  + 
Sbjct: 415 LVKMA 419


>gi|21220307|ref|NP_626086.1| tyrosyl-tRNA synthetase [Streptomyces coelicolor A3(2)]
 gi|81550098|sp|Q9RJ50|SYY_STRCO RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|6117861|emb|CAB59434.1| tyrosyl-tRNA synthetase (EC 6.1.1.1) [Streptomyces coelicolor
           A3(2)]
          Length = 422

 Score =  484 bits (1247), Expect = e-135,   Method: Composition-based stats.
 Identities = 141/422 (33%), Positives = 229/422 (54%), Gaps = 11/422 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +D +  L  RG   Q ++   L    + G VT Y G+D TA SLH GHL Q++ +  LQ+
Sbjct: 2   TDIVDELKWRGLFAQSTDEDALRKALADGPVTFYCGFDPTAPSLHVGHLVQVLTVRRLQQ 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+P++L+GG T  IGDP      R +   + +   +E+++G    F+ +  G+  A+M
Sbjct: 62  AGHRPLALVGGATGQIGDPRP-TAERTLNSPETVAGWVERLRGQIEPFLSF-EGENAAVM 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  W   +  I+ LR+IG  F VN+ML+ +SV  RL+  + +S+ EF+Y +LQA DF+
Sbjct: 120 VNNLDWTEGLSAIEFLRDIGKHFRVNKMLTKDSVARRLESSEGISYTEFSYQLLQAMDFL 179

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASGTKMGKTLSGA 244
           +L + Y C +Q GGSDQWGN+  G+DL  RL+    + A  +PL+T A GTK GKT  GA
Sbjct: 180 QLYRRYGCTMQQGGSDQWGNLTAGLDLLHRLEPDASVHAYATPLMTKADGTKFGKTEGGA 239

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKII 302
           +WL+ EMT+PY F+Q+W N+DD D+ ++ + L+    +E++ + +   +      A++ +
Sbjct: 240 VWLDPEMTTPYAFYQFWLNVDDRDISTYMRILSFRSRAELEELERQTEERPQARAAQRAL 299

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQ------HMPTISISKDEVSRGMGLLTLI 356
           A E+TT+VHG  +      A+   F     ++            +    V+    ++ L 
Sbjct: 300 AEELTTLVHGAGQTAAVIAASKALFGQGELAELDEATLAAALSELPHVRVAEPAPVVDLF 359

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            + G   S + ARR +K     +NN+ ++ E      +D      + L  GKKN     +
Sbjct: 360 AEVGLVASKSAARRTVKEGGAYVNNAKVTGEDAVPAKEDLLHGRWLVLRRGKKNLAAVEI 419

Query: 417 CG 418
            G
Sbjct: 420 TG 421


>gi|319892786|ref|YP_004149661.1| Tyrosyl-tRNA synthetase [Staphylococcus pseudintermedius HKU10-03]
 gi|317162482|gb|ADV06025.1| Tyrosyl-tRNA synthetase [Staphylococcus pseudintermedius HKU10-03]
 gi|323464183|gb|ADX76336.1| tyrosyl-tRNA synthetase [Staphylococcus pseudintermedius ED99]
          Length = 420

 Score =  484 bits (1247), Expect = e-135,   Method: Composition-based stats.
 Identities = 139/421 (33%), Positives = 221/421 (52%), Gaps = 20/421 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  LS RG ++Q ++   ++ L ++  V  Y G D TA SLH GHL   + L   Q+ G
Sbjct: 5   LLEELSWRGLVYQQTDEEGIETLLNKEEVKIYCGADPTADSLHIGHLLPYLTLRRFQEAG 64

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+PI L+GGGT +IGDPS + E R +    ++ +N+  I+        +   +   +++N
Sbjct: 65  HRPIVLVGGGTGMIGDPSGKSEERVLQTEAQVDKNVRGIQQQMEQLFDFN-VENGPILVN 123

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  I  I+ LR+ G    VN ML  +S++SRL  E  +S+ EF Y ILQA DF  L
Sbjct: 124 NYDWLSQISLIEFLRDYGKHVGVNYMLGKDSIQSRL--ENGISYTEFTYTILQAIDFGHL 181

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLG-ERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
            + +DC+LQ+GGSDQWGNI  GI+L         ++  T PL+T A G K GK+ SG IW
Sbjct: 182 NRVHDCKLQIGGSDQWGNITSGIELMRRMYGVTDVYGFTIPLVTKADGKKFGKSESGTIW 241

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIAT 304
           L+ E TSPY F+Q+W N  D DV+ F K  T L  ++I+ + K  ++   + +A+  +A 
Sbjct: 242 LDPEKTSPYEFYQFWINTSDDDVIKFLKYFTFLSKTDIEALEKSVVEEPHLRKAQTTLAE 301

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLT 354
           E+T  +HG +   +A   +   F   + S          + +P +++S    +    ++ 
Sbjct: 302 EVTRFIHGNDALAEAQRISQALFKGDLKSLSAEEIKAGFKDVPQVTLS----NETTNIVD 357

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +V+   ++S  +AR  + + AI IN     +    +   D        +  GKK + + 
Sbjct: 358 ALVETKISSSKRQAREDITNGAIYINGERQQDLAYTLSSDDRYDDTFTIIRRGKKKYFMV 417

Query: 415 H 415
           +
Sbjct: 418 N 418


>gi|227501840|ref|ZP_03931889.1| tyrosyl-tRNA synthetase [Corynebacterium accolens ATCC 49725]
 gi|227077865|gb|EEI15828.1| tyrosyl-tRNA synthetase [Corynebacterium accolens ATCC 49725]
          Length = 428

 Score =  484 bits (1247), Expect = e-135,   Method: Composition-based stats.
 Identities = 154/425 (36%), Positives = 235/425 (55%), Gaps = 17/425 (4%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           ++ +  L  RG I+Q ++   L    ++  ++ Y G+D T SSLHAGHL  L++L   Q+
Sbjct: 5   TNIIDELQWRGLINQSTDLEALKEA-AESPISLYCGFDPTGSSLHAGHLVPLIMLKRFQR 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY---GTGKTD 122
            GH+PI+L GG T +IGDP    E R M+  ++I EN++ IK    +F+ +   G     
Sbjct: 64  FGHRPIALAGGATGMIGDPRDVGE-RSMLSEEQIAENMQAIKDQLEAFVDFTEAGESAIP 122

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
           A+M+NN  W   I  I+ LR+IG  FS+N ML  ++V+ RL+ +  +S+ EF+YM+LQA 
Sbjct: 123 AVMVNNADWTSQINVIEYLRDIGKNFSLNTMLDRDTVKRRLESD-GISYTEFSYMLLQAN 181

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DFV L K YDC LQ+GG DQWGNI+ G+DL  R+   K+  LT PL+T A G K GK+  
Sbjct: 182 DFVHLHKEYDCVLQIGGGDQWGNIVSGVDLNRRVNGAKVHGLTVPLVTDAEGNKFGKSTG 241

Query: 243 GA-IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAK 299
           G  +WL+ ++TSPY+++QY+ N  DA V+ + +  T L   EI  +A+   +     EA+
Sbjct: 242 GGKLWLDPQLTSPYSWYQYFINAGDAVVIDYLRWFTFLTQEEIAELARKVEEEPHKREAQ 301

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISK-------DEVSRGMGL 352
           +++A E+TT+VHG +  E    A+   F  +   Q +   ++S         EV     +
Sbjct: 302 RVLAREMTTLVHGEQATEAVELASQALFGKAEL-QDLDEATLSSALQETEIAEVGPEATI 360

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           L L+V+AG   S   ARR +      +NN  I + +      D      + L  GKK   
Sbjct: 361 LDLLVEAGLEKSKGAARRTVGEGGAYVNNQRIEDIEWSPNSNDLLHGSWLVLRKGKKRFA 420

Query: 413 ICHLC 417
              + 
Sbjct: 421 GARVV 425


>gi|254445843|ref|ZP_05059319.1| tyrosyl-tRNA synthetase [Verrucomicrobiae bacterium DG1235]
 gi|198260151|gb|EDY84459.1| tyrosyl-tRNA synthetase [Verrucomicrobiae bacterium DG1235]
          Length = 428

 Score =  484 bits (1247), Expect = e-134,   Method: Composition-based stats.
 Identities = 146/421 (34%), Positives = 226/421 (53%), Gaps = 16/421 (3%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L  RG ++  +   EL     +G ++ Y G+D TA SLH G+L  L+ L   Q  G
Sbjct: 3   ILEDLHWRGLVNDCTAAEELAKRLEEGPISLYAGFDPTADSLHVGNLVPLIGLRRFQNYG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG-KTDALML 126
           HKPI+L GG T  IGDPS +   R+++  + +  NI +++   +  + +    +  A ++
Sbjct: 63  HKPIALAGGATGSIGDPSGKKSERQLLTKEVLDHNIAQVRVQLTRLLDFSEDIENTAKLV 122

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYDFV 185
           +N +W+  I ++D LR+ G + +VN M+S +SV+SR+  E+  +SF EF+YM+LQ YDF 
Sbjct: 123 DNASWMSQISFLDFLRDTGKYITVNSMVSKDSVKSRMGDEKSGISFTEFSYMLLQGYDFY 182

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L +   C LQ+GGSDQWGNI  G +L  +     ++ LT PL+T + G+K GK+  GAI
Sbjct: 183 HLNQAESCELQIGGSDQWGNITVGTELTRKKAGNTVYGLTLPLITNSDGSKFGKSEKGAI 242

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIA 303
           WL+   TS Y F+QY+ N+DD DVV + K  T L   +I  + K   +      A   +A
Sbjct: 243 WLDPAKTSVYRFYQYFVNVDDRDVVRYLKFFTFLSQEQIAELEKQHAENPGARVAHHALA 302

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIH----------SQHMPTISISKDEV--SRGMG 351
           TE+T ++HG    + A TA+   F   +           +  +PT  IS D++    G+ 
Sbjct: 303 TEMTNLIHGEHATQDAITASKILFGGGLDGISENALANVAGEIPTAKISADKLASEDGLL 362

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           LL  +V  G + S  EA++ +K     +NN  I     ++   D      I L  GKKN+
Sbjct: 363 LLDALVDTGLSNSRGEAKKAVKEGGAYVNNQRIQEMGYKLSDSDVHYGKYILLRRGKKNY 422

Query: 412 I 412
            
Sbjct: 423 A 423


>gi|167013192|pdb|2JAN|A Chain A, Tyrosyl-Trna Synthetase From Mycobacterium Tuberculosis In
           Unliganded State
 gi|167013193|pdb|2JAN|B Chain B, Tyrosyl-Trna Synthetase From Mycobacterium Tuberculosis In
           Unliganded State
 gi|167013194|pdb|2JAN|C Chain C, Tyrosyl-Trna Synthetase From Mycobacterium Tuberculosis In
           Unliganded State
 gi|167013195|pdb|2JAN|D Chain D, Tyrosyl-Trna Synthetase From Mycobacterium Tuberculosis In
           Unliganded State
          Length = 432

 Score =  484 bits (1247), Expect = e-134,   Method: Composition-based stats.
 Identities = 146/422 (34%), Positives = 230/422 (54%), Gaps = 13/422 (3%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  LS RG I Q ++   L     +G +T Y G+D TA SLHAGHL  L+ L   Q+ G
Sbjct: 5   ILDELSWRGLIAQSTDLDTLAAEAQRGPMTVYAGFDPTAPSLHAGHLVPLLTLRRFQRAG 64

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+PI L GG T +IGDP    E R +  +  + E  E+I+G    F+ +      A++ N
Sbjct: 65  HRPIVLAGGATGMIGDPRDVGE-RSLNEADTVAEWTERIRGQLERFVDFDDSPMGAIVEN 123

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W  S+  I+ LR+IG  FSVN ML+ +++R RL   + +S+ EF+Y++LQA D+VEL
Sbjct: 124 NLEWTGSLSAIEFLRDIGKHFSVNVMLARDTIRRRLA-GEGISYTEFSYLLLQANDYVEL 182

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT-LSGAIW 246
            + + C LQ+GG+DQWGNII G+ L  +     + ALT PL+T A GTK GK+   G++W
Sbjct: 183 HRRHGCTLQIGGADQWGNIIAGVRLVRQKLGATVHALTVPLVTAADGTKFGKSTGGGSLW 242

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIAT 304
           L+ +MTSPY ++QY+ N  DADV+ + +  T L   E+  + +   Q  +   A++ +A+
Sbjct: 243 LDPQMTSPYAWYQYFVNTADADVIRYLRWFTFLSADELAELEQATAQRPQQRAAQRRLAS 302

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQ--------HMPTISISKDEVSRGMGLLTLI 356
           E+T +VHG         A+   F     ++         +   ++++ +     G++ L+
Sbjct: 303 ELTVLVHGEAATAAVEHASRALFGRGELARLDEATLAAALRETTVAELKPGSPDGIVDLL 362

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V +G + S   ARR +    + +NN  + NE+   +  DF     + L  GK++      
Sbjct: 363 VASGLSASKGAARRTIHEGGVSVNNIRVDNEEWVPQSSDFLHGRWLVLRRGKRSIAGVER 422

Query: 417 CG 418
            G
Sbjct: 423 IG 424


>gi|304388370|ref|ZP_07370481.1| tyrosine--tRNA ligase [Neisseria meningitidis ATCC 13091]
 gi|304337636|gb|EFM03794.1| tyrosine--tRNA ligase [Neisseria meningitidis ATCC 13091]
          Length = 431

 Score =  484 bits (1247), Expect = e-134,   Method: Composition-based stats.
 Identities = 154/427 (36%), Positives = 225/427 (52%), Gaps = 21/427 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            +  L  RG I Q ++   LD L ++  +  Y G+D TA SLH GHL  ++ L   Q+ G
Sbjct: 3   VIQDLQSRGLIAQTTDIEALDALLNEQKIALYCGFDPTADSLHIGHLLPVLALRRFQQAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H PI+L+GG T +IGDPSF+   R +  ++ +   +E I+   + F+ +  G   A+M N
Sbjct: 63  HTPIALVGGATGMIGDPSFKAAERSLNSAETVAGWVESIRNQLTPFLSF-EGGNAAIMAN 121

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDFVE 186
           N  W   +  +D LR+IG  FSVN ML+ ESV+ R+ R    +SF EF Y +LQ YDF E
Sbjct: 122 NADWFGKMNCLDFLRDIGKHFSVNAMLNKESVKQRIDRDGAGISFTEFAYSLLQGYDFAE 181

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L K +   L++GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  GA+W
Sbjct: 182 LNKRHGAVLEIGGSDQWGNITAGIDLTRRLHQKQVFGLTLPLVTKSDGTKFGKTEGGAVW 241

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINEAKKIIAT 304
           LN + TSPY F+Q+W  + DADV  F K  T L + EID +           EA++I+A 
Sbjct: 242 LNAKKTSPYQFYQFWLKVADADVYKFLKYFTFLSIEEIDAIEAKDKASGTKPEAQRILAE 301

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTLIVK 358
           E+T ++HG    + A   +   F     S      + +    +   E+S G+  +  +VK
Sbjct: 302 EMTRLIHGEAALQAAQRISESLFAEDQSSLTESDFEQLALDGLPAFEISDGINAVEALVK 361

Query: 359 AGFATSTNEARRHLKSNAIKINNSIIS-----------NEKLQIKLQDFDSTGNIKLSFG 407
            G A S  EAR  + + A+ +N                ++   +  +         L  G
Sbjct: 362 TGLAASNKEARGFVNAKAVLLNGKPAEANNPNHAAERPDDACLLNGEHKRFGKYTILRRG 421

Query: 408 KKNHIIC 414
           K+NH + 
Sbjct: 422 KRNHALL 428


>gi|225022590|ref|ZP_03711782.1| hypothetical protein CORMATOL_02632 [Corynebacterium matruchotii
           ATCC 33806]
 gi|224944498|gb|EEG25707.1| hypothetical protein CORMATOL_02632 [Corynebacterium matruchotii
           ATCC 33806]
          Length = 418

 Score =  484 bits (1247), Expect = e-134,   Method: Composition-based stats.
 Identities = 155/421 (36%), Positives = 232/421 (55%), Gaps = 16/421 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG I+Q ++  EL   C +  +T Y G+D T +SLHAGHL  L++L   Q  
Sbjct: 2   NIVDELLWRGLINQATDVDELRAAC-EQPITLYCGFDPTGASLHAGHLVPLIMLKRFQNA 60

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+ ++L GG T +IGDP    E R M+  +EI  NI  I+    SFI Y  GK  A+M+
Sbjct: 61  GHRVLTLAGGATGMIGDPRDVGE-RSMLSEEEIAHNIAAIQDQIRSFIDYTDGK--AIMV 117

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL     ID LR++G  FS+N ML  E+V+ RL  +  +S+ EF+YM+LQ+YD+V 
Sbjct: 118 NNADWLGKFSLIDYLRDLGKNFSLNTMLDRETVKRRLGSD-GISYTEFSYMLLQSYDYVH 176

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA-I 245
           L + YDC LQ+GG DQWGNI+ G+DL  R+   K+  LT PL+T A G K GK+  G  +
Sbjct: 177 LNREYDCVLQIGGGDQWGNIVSGVDLNRRMNQTKVHGLTVPLVTDAQGQKFGKSTGGGKL 236

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA--KLQGKEINEAKKIIA 303
           WL+ E+TSPY+++QY+ N  D+ V+ + +  T L  +EI        +   + EA++ +A
Sbjct: 237 WLDPELTSPYSWYQYFLNAGDSVVIDYLRWFTFLSQAEIAEYEVTVQERPHLREAQRRLA 296

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQ--------HMPTISISKDEVSRGMGLLTL 355
            E+TT+VHG    E    AA   F  +  ++         +   ++++        ++ L
Sbjct: 297 QEMTTLVHGSAATEAVELAAQALFGRAELTELDEATLRGALQETTVAEITPQDPRTIVDL 356

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +V +G A S   ARR +K     +NN  IS+E  +    D      + L  GKK      
Sbjct: 357 LVASGLAASKGAARRTIKEGGAYVNNQRISSEDWEPTADDLLYGTWLVLRRGKKTFAGAK 416

Query: 416 L 416
           +
Sbjct: 417 I 417


>gi|302383296|ref|YP_003819119.1| tyrosyl-tRNA synthetase [Brevundimonas subvibrioides ATCC 15264]
 gi|302193924|gb|ADL01496.1| tyrosyl-tRNA synthetase [Brevundimonas subvibrioides ATCC 15264]
          Length = 418

 Score =  484 bits (1247), Expect = e-134,   Method: Composition-based stats.
 Identities = 197/414 (47%), Positives = 274/414 (66%), Gaps = 1/414 (0%)

Query: 2   PAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
            +F+SDFL  L  RG+IHQ+++P ELD     GVV  YIG+D TA SLH G L Q+M+L 
Sbjct: 4   TSFQSDFLKTLQARGYIHQVTHPAELDAAAKAGVVAGYIGFDATAPSLHVGSLIQIMMLR 63

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKT 121
            LQ+ G +P+ +MGGGT+ +GDP+ +D SR  +  + IQ NI  IK +F  F+ +G G T
Sbjct: 64  RLQQAGGRPVVIMGGGTTKVGDPTGKDASRPQLTDETIQSNIASIKTVFEKFLVFGDGPT 123

Query: 122 DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA 181
           DA+M++N+ WL    Y++ LR+ G+ F+VNRML+F+SV+ RL+REQ ++FLEFNYM++Q+
Sbjct: 124 DAVMIDNDEWLSKYGYVEFLRDYGTHFTVNRMLAFDSVKLRLEREQPMTFLEFNYMLMQS 183

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            DF+EL + ++  LQMGGSDQWGNI+ G+DL  R+     F LT+PLLTTASG KMGKT 
Sbjct: 184 VDFLELNRRHNVTLQMGGSDQWGNIVSGVDLVRRVDHKAAFGLTTPLLTTASGGKMGKTA 243

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKI 301
            GA+WLN E  SPY++WQ+WRN +DADV  F K  T LP+ E+ R   LQG +INEAKK 
Sbjct: 244 QGAVWLNAEQLSPYDYWQFWRNAEDADVGKFMKLFTDLPLEEVARFEALQGADINEAKKA 303

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGF 361
           +A   TT++HG E A  A  AA   F+    S  +PTI +   EV  G  L  +  +AG 
Sbjct: 304 LADAATTLLHGAEAAAAARAAAEGAFERGTLSTDLPTIDLPSGEV-IGAMLAAVATRAGL 362

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
             S  EARR  +   +++N+  I++    I+  D ++ G IKL+ GKK  ++  
Sbjct: 363 TASNGEARRLAQGGGLRLNDEAIADGARLIEASDVNADGVIKLAAGKKKLMLVR 416


>gi|325679290|ref|ZP_08158875.1| tyrosine--tRNA ligase [Ruminococcus albus 8]
 gi|324108887|gb|EGC03118.1| tyrosine--tRNA ligase [Ruminococcus albus 8]
          Length = 406

 Score =  484 bits (1247), Expect = e-134,   Method: Composition-based stats.
 Identities = 179/403 (44%), Positives = 259/403 (64%), Gaps = 12/403 (2%)

Query: 10  SILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
             L  RG I Q+++ +E+  + + G    YIG+D TA SLH GH   L L+  LQ  G+K
Sbjct: 5   EELVRRGLIAQVTDEKEISNMINNGKAVFYIGFDPTADSLHVGHFMALCLMKRLQMAGNK 64

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
           PI+L+GGGT +IGDPS + + R+M+  + IQ N E  K   S FI +  GK  ALM+NN 
Sbjct: 65  PIALVGGGTGMIGDPSGKSDMRKMLTPETIQHNCECFKKQMSRFIDFSDGK--ALMVNNG 122

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
            WL ++ YID+LRE+G+ FSVN+ML+FE  + R++R   L+FLEFNYMI+Q+YDF  L +
Sbjct: 123 DWLLNLNYIDVLREVGACFSVNKMLTFECYKQRMER--GLTFLEFNYMIMQSYDFYRLFQ 180

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
           +Y C +Q GG DQW N++ G +L  +       A+T  LL  + G KMGKT  GA+WL+ 
Sbjct: 181 DYGCNMQFGGDDQWANMLGGTELIRKKLGKDAHAMTITLLLNSEGKKMGKTEKGAVWLDA 240

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK-LQGKEINEAKKIIATEITT 308
           E TSPY+F+QYWRN+DDADV+   K LT +P+ EI+ M + ++G E N+AK+++A E+T 
Sbjct: 241 EKTSPYDFYQYWRNVDDADVIKCLKLLTFVPIEEIEEMEQHMEGAEYNKAKELLAFELTK 300

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG--MGLLTLIVKAGFATSTN 366
           ++HG EEA+KA  AA   F     S  MPT +++KD+V     +G+L L+VKAG A S +
Sbjct: 301 LIHGEEEAKKADAAAKAIFGGGADSADMPTTTLTKDDVDENNCIGILNLLVKAGLAPSNS 360

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
           EARR ++ N I +N    ++ K  + + +      + +  GKK
Sbjct: 361 EARRLVQQNGIAVNGEKFTDPKGMVDISE-----QVIIKKGKK 398


>gi|149196813|ref|ZP_01873866.1| tyrosyl-tRNA synthetase [Lentisphaera araneosa HTCC2155]
 gi|149139923|gb|EDM28323.1| tyrosyl-tRNA synthetase [Lentisphaera araneosa HTCC2155]
          Length = 424

 Score =  484 bits (1247), Expect = e-134,   Method: Composition-based stats.
 Identities = 162/427 (37%), Positives = 237/427 (55%), Gaps = 22/427 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L  RG I Q S   EL    S   ++ Y G+D TA SLH GHL  L+ L   Q+ 
Sbjct: 4   NIYDELKWRGLIFQESGQDELRSYLSDEKISVYCGFDPTADSLHIGHLVPLITLRRFQEY 63

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH  + L GG T +IGDPS + + R ++ S +I  N+E IK      I +      A ++
Sbjct: 64  GHSVLPLAGGATGMIGDPSGKSQERNLLSSDDIAHNVESIKSQLKQIIDFSGD--SATLV 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK-REQSLSFLEFNYMILQAYDFV 185
           NN  W+  I  I+ LR+IG  FSVN M++ +SV SRL+ +E  LS+ EF+YM+LQ YDF+
Sbjct: 122 NNFDWISKINIIEYLRDIGKNFSVNVMMNRDSVSSRLEGKEAGLSYTEFSYMVLQGYDFL 181

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L + ++C LQ+GGSDQWGN+  G+DL  R    + F +T PL+  + GTK GKT  G++
Sbjct: 182 HLNREHNCTLQIGGSDQWGNMTSGMDLIRRSNGKRSFCMTVPLIMKSDGTKFGKTAGGSV 241

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIA 303
           WL+ + T PY+F+QYW N+ DADV+ F K  T LP   ++ +     Q   + EA+K +A
Sbjct: 242 WLDPKQTCPYDFYQYWFNVADADVIRFIKFFTFLPQDVVEALQASVEQEPHLREAQKKLA 301

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQ-------------HMPTISISKDEVSRGM 350
            E+TTM+HG EEA+KA  AA   F      +               P+ S S DEV    
Sbjct: 302 WEMTTMIHGEEEAKKAIFAAAALFGREDIREVDAITMDALHNATEAPSFS-SLDEVE--- 357

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
           G+L+L+  +G   S+ EAR+ ++ N I +NN  + + + +   +D      + L  GKK+
Sbjct: 358 GILSLLTASGLCKSSGEARKMVQGNGISLNNEKVKDFRYKPVQEDLIHQTYLVLRKGKKD 417

Query: 411 HIICHLC 417
             +    
Sbjct: 418 FSVIKFT 424


>gi|306836020|ref|ZP_07469011.1| tyrosine--tRNA ligase [Corynebacterium accolens ATCC 49726]
 gi|304568109|gb|EFM43683.1| tyrosine--tRNA ligase [Corynebacterium accolens ATCC 49726]
          Length = 428

 Score =  484 bits (1246), Expect = e-134,   Method: Composition-based stats.
 Identities = 153/425 (36%), Positives = 234/425 (55%), Gaps = 17/425 (4%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           ++ +  L  RG I+Q ++   L    ++  ++ Y G+D T SSLHAGHL  L++L   Q+
Sbjct: 5   TNIIDELQWRGLINQSTDLEALKEA-AESPISLYCGFDPTGSSLHAGHLVPLIMLKRFQR 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY---GTGKTD 122
            GH+PI+L GG T +IGDP    E R M+  ++I EN++ IK    +F+ +   G     
Sbjct: 64  FGHRPIALAGGATGMIGDPRDVGE-RSMLSEEQIAENMQAIKDQLEAFVDFTEAGESAIP 122

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
           A+M+NN  W   I  I+ LR+IG  FS+N ML  ++V+ RL+ +  +S+ EF+YM+LQA 
Sbjct: 123 AVMVNNADWTSQINVIEYLRDIGKNFSLNTMLDRDTVKRRLESD-GISYTEFSYMLLQAN 181

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DFV L K YDC LQ+GG DQWGNI+ G+DL  R+   K+  LT PL+T A G K GK+  
Sbjct: 182 DFVHLHKEYDCVLQIGGGDQWGNIVSGVDLNRRVNGAKVHGLTVPLVTDAEGNKFGKSTG 241

Query: 243 GA-IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAK 299
           G  +WL+ ++T PY+++QY+ N  DA V+ + +  T L   EI  +A+   +     EA+
Sbjct: 242 GGKLWLDPQLTRPYSWYQYFINAGDAVVIDYLRWFTFLTQEEIAELARKVEEEPHKREAQ 301

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISK-------DEVSRGMGL 352
           +++A E+TT+VHG +  E    A+   F  +   Q +   ++S         EV     +
Sbjct: 302 RVLAREMTTLVHGEQATEAVELASQALFGKAEL-QDLDEATLSSALQETEIAEVGPEATI 360

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           L L+V+AG   S   ARR +      +NN  I + +      D      + L  GKK   
Sbjct: 361 LDLLVEAGLEKSKGAARRTVGEGGAYVNNQRIEDIEWSPNSNDLLHGSWLVLRKGKKRFA 420

Query: 413 ICHLC 417
              + 
Sbjct: 421 GARVV 425


>gi|229118589|ref|ZP_04247941.1| Tyrosyl-tRNA synthetase [Bacillus cereus Rock1-3]
 gi|228664781|gb|EEL20271.1| Tyrosyl-tRNA synthetase [Bacillus cereus Rock1-3]
          Length = 419

 Score =  484 bits (1246), Expect = e-134,   Method: Composition-based stats.
 Identities = 144/420 (34%), Positives = 217/420 (51%), Gaps = 13/420 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG ++Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  
Sbjct: 2   NIIDELEWRGAVNQQTDEEGLRKLVEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P+ L+GG T  IGDPS R   R++   + +Q N++ +         +G G ++  M+
Sbjct: 62  GHHPVILIGGATGTIGDPSGRQSERQLQTLEVVQHNVDALTAQMKKLFDFG-GNSEVKMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I  I+ LR+ G  FS+N ML+ + V SRL  +  +SF EF Y ILQA DF  
Sbjct: 121 NNYDWTHEINIIEFLRDYGKNFSINSMLAKDIVASRL--DTGISFTEFTYQILQAMDFHH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKLFALTSPLLTTASGTKMGKTLSGA 244
           L    D +LQ+GGSDQWGNI  G+DL  +L+    K+F LT PLL  + GTK GK+ SGA
Sbjct: 179 LYTKEDVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSASGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKII 302
           +WL+ E T+P+ F+Q+W N DD DV+ + K  T L    ID +A     E    EA+K++
Sbjct: 239 VWLDAEKTTPFEFYQFWVNTDDRDVIKYLKYFTFLAKERIDELATKVEAEPHKREAQKVL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVS------RGMGLLTLI 356
             E+T  VHG E   +A       F   I S     I     E+           ++  +
Sbjct: 299 GEEMTKFVHGEEALLQAVKITSALFSGDIKSLTADEIEQGFKEMPTFQSSKETKNIVEWL 358

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V  G   S  +AR  + + AI +N   +++    + +++      I +  G+KN+ +  L
Sbjct: 359 VDLGIEPSRRQAREDINNGAISMNGEKVTDVGTDVTVENSFDGRFIIIRKGRKNYSLVKL 418


>gi|256788572|ref|ZP_05527003.1| tyrosyl-tRNA synthetase [Streptomyces lividans TK24]
 gi|289772465|ref|ZP_06531843.1| tyrosyl-tRNA synthetase [Streptomyces lividans TK24]
 gi|289702664|gb|EFD70093.1| tyrosyl-tRNA synthetase [Streptomyces lividans TK24]
          Length = 422

 Score =  484 bits (1246), Expect = e-134,   Method: Composition-based stats.
 Identities = 141/422 (33%), Positives = 229/422 (54%), Gaps = 11/422 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +D +  L  RG   Q ++   L    + G VT Y G+D TA SLH GHL Q++ +  LQ+
Sbjct: 2   TDIVDELKWRGLFAQSTDEDALRKALADGPVTFYCGFDPTAPSLHVGHLVQVLTVRRLQQ 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+P++L+GG T  IGDP      R +   + +   +E+++G    F+ +  G+  A+M
Sbjct: 62  AGHRPLALVGGATGQIGDPRP-TAERTLNSPETVAGWVERLRGQIEPFLSF-EGENAAVM 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  W   +  I+ LR+IG  F VN+ML+ +SV  RL+  + +S+ EF+Y +LQA DF+
Sbjct: 120 VNNLDWTEGLSAIEFLRDIGKHFRVNKMLTKDSVARRLESSEGISYTEFSYQLLQAMDFL 179

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASGTKMGKTLSGA 244
           +L + Y C +Q GGSDQWGN+  G+DL  RL+    + A  +PL+T A GTK GKT  GA
Sbjct: 180 QLYQRYGCTMQQGGSDQWGNLTAGLDLLHRLEPDASVHAYATPLMTKADGTKFGKTEGGA 239

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKII 302
           +WL+ EMT+PY F+Q+W N+DD D+ ++ + L+    +E++ + +   +      A++ +
Sbjct: 240 VWLDPEMTTPYAFYQFWLNVDDRDISTYMRILSFRSRAELEELERQTEERPQARAAQRAL 299

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQ------HMPTISISKDEVSRGMGLLTLI 356
           A E+TT+VHG  +      A+   F     ++            +    V+    ++ L 
Sbjct: 300 AEELTTLVHGAGQTAAVIAASKALFGQGELAELDEATLAAALSELPHVRVAEPAPVVDLF 359

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            + G   S + ARR +K     +NN+ ++ E      +D      + L  GKKN     +
Sbjct: 360 AEVGLVASKSAARRTVKEGGAYVNNAKVTGEDAVPAKEDLLHGRWLVLRRGKKNLAAVEI 419

Query: 417 CG 418
            G
Sbjct: 420 TG 421


>gi|254293802|ref|YP_003059825.1| tyrosyl-tRNA synthetase [Hirschia baltica ATCC 49814]
 gi|254042333|gb|ACT59128.1| tyrosyl-tRNA synthetase [Hirschia baltica ATCC 49814]
          Length = 421

 Score =  484 bits (1246), Expect = e-134,   Method: Composition-based stats.
 Identities = 190/414 (45%), Positives = 271/414 (65%), Gaps = 2/414 (0%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           MP  +S+ L  L ERG+++QI++   LD      +  AY GYD TASSLH GHL  +M+L
Sbjct: 7   MP--QSELLRTLFERGYVYQITDEAGLDEYAKSEMPIAYAGYDATASSLHVGHLVSIMML 64

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             LQ+ G KPI LMGGGT+ IGDP+ +++SR ++  +EIQ+NI  IK +F  F+ +G G 
Sbjct: 65  RRLQQAGGKPIVLMGGGTTKIGDPTDKEKSRPILTEEEIQKNINGIKSVFEKFLTFGDGP 124

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           TDA+M+NN+ WL  I Y++ LR+ G  F++N+M+  ++V+ RL+ EQ  +FLEFNY +LQ
Sbjct: 125 TDAVMVNNDDWLGKINYLEFLRDYGKLFTINKMIMQDTVKRRLENEQPYTFLEFNYALLQ 184

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVEL +    RLQ+GGSDQWGNI  G +L  R++  + F  T+PLLTTASG KMGKT
Sbjct: 185 AYDFVELNRRLKVRLQLGGSDQWGNITNGTELCRRVENVQAFGFTTPLLTTASGVKMGKT 244

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           + GA+WLN ++ SPY++WQ+WRN +DADV  F K  T LP+ +I  +  L+G +IN+AK 
Sbjct: 245 VGGAVWLNADLKSPYDYWQFWRNTEDADVGKFLKLFTDLPLDKIAELESLKGAQINDAKI 304

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
            +A   T+M+HG E A++A  AA + F     +  MP+  ++  E+  G  ++   V +G
Sbjct: 305 ALADAATSMLHGEEAAKEANAAAAKVFAEGATADGMPSFDVAMSEIESGYSVIDGFVASG 364

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            A S  E RRH+K+ A K+N   I++E   I   D +S    +LS GKK H   
Sbjct: 365 LAKSKGEVRRHIKAGAAKLNGETITDELATIGTADLESDNTARLSIGKKRHARL 418


>gi|219118843|ref|XP_002180188.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217408445|gb|EEC48379.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 488

 Score =  484 bits (1246), Expect = e-134,   Method: Composition-based stats.
 Identities = 190/419 (45%), Positives = 275/419 (65%), Gaps = 3/419 (0%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           +   +S+FL  + +RGF+HQ +N R+LD    +G   AY+G+D TA SLH G L Q+M+L
Sbjct: 68  LETLQSEFLQTMRDRGFLHQCTNIRDLDAKLCEGPQAAYLGFDATADSLHVGSLLQIMIL 127

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             LQ++GH+P+ L+GGGTS +GDP+ +DESR ++  + IQ+N + I  +F  F+ +G  K
Sbjct: 128 RHLQRSGHRPVVLIGGGTSKVGDPTGKDESRVLLTDEIIQQNTDGISKVFQQFLTFGDEK 187

Query: 121 -TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
            TDA+M+NN+ WL  IKY+D LR  G+ F++NRMLSFESV+ RL RE   SFLEFNYMIL
Sbjct: 188 PTDAIMVNNDEWLSEIKYLDFLRTYGTHFTINRMLSFESVKQRLTREAPFSFLEFNYMIL 247

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK 239
           QAYDF+EL + +   LQ+GGSDQWGN+I G +LG +L++ +LFALT+PL+TT+ G KMGK
Sbjct: 248 QAYDFLELYRRHKTILQLGGSDQWGNMISGTELGRKLESAQLFALTAPLITTSDGKKMGK 307

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAK 299
           T +GA+WLN    S Y++WQ+WRN DDADV+ F K  T LP+ ++  + KLQG EIN+AK
Sbjct: 308 TANGAVWLNAARLSSYDYWQFWRNTDDADVIRFLKLFTELPLDKVAELEKLQGAEINQAK 367

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSI-HSQHMPTISISKDEVS-RGMGLLTLIV 357
            ++A E T ++HG +  E         F      ++ +P +  SK ++   G+  L L+V
Sbjct: 368 IVLADEATALLHGSDSLEAIHKTIETMFAGGGSDTESLPRVYASKTDLETNGVRFLDLLV 427

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           K   A S  EARR ++    ++  + I++E   + L DF     + L  GKK   +  +
Sbjct: 428 KLKLANSKKEARRLIQGGGARLGETPIADENGVLILTDFGGATEVTLRAGKKRAGVVEI 486


>gi|300858380|ref|YP_003783363.1| tyrosyl-tRNA synthetase [Corynebacterium pseudotuberculosis FRC41]
 gi|300685834|gb|ADK28756.1| Tyrosyl-tRNA synthetase [Corynebacterium pseudotuberculosis FRC41]
 gi|302206093|gb|ADL10435.1| Putative tyrosyl-tRNA synthetase [Corynebacterium
           pseudotuberculosis C231]
 gi|302330646|gb|ADL20840.1| tyrosyl-tRNA synthetase [Corynebacterium pseudotuberculosis 1002]
 gi|308276330|gb|ADO26229.1| Tyrosyl-tRNA synthetase [Corynebacterium pseudotuberculosis I19]
          Length = 426

 Score =  484 bits (1246), Expect = e-134,   Method: Composition-based stats.
 Identities = 156/422 (36%), Positives = 232/422 (54%), Gaps = 15/422 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG I+  ++   L   C +  +T Y G+D T  SLHAGHL  +++L   Q+ 
Sbjct: 6   NIVDELLWRGLINDSTDIDALREAC-EQPITLYCGFDPTGDSLHAGHLVPMVMLRRFQQF 64

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKT-DALM 125
           GH+P++L GG T +IGDP    E R M+   ++ +N+E IKG    F+ + +G+  DA+M
Sbjct: 65  GHRPLTLAGGATGMIGDPREVGE-RVMLTEDKVAQNLEAIKGQLRRFVSFESGQNNDAIM 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  W   +  I+ LR++G  FS+N ML  E+V+ RL  +  +S+ EF+YM+LQ+ DFV
Sbjct: 124 VNNADWTAGMSVIEFLRDVGKNFSLNTMLDRETVKRRLASD-GISYTEFSYMLLQSNDFV 182

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA- 244
            L K YDC LQ+GG DQWGNII G+DL  R+   K+ ALT PL+T A G K GK+  G  
Sbjct: 183 HLRKKYDCILQIGGGDQWGNIISGVDLNRRVDGTKVHALTVPLVTDAQGQKFGKSTGGGK 242

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA--KLQGKEINEAKKII 302
           +WL+ E TSPY+++QY+ N  D  V+++ K  T L  SEI  +     +     EA++ +
Sbjct: 243 LWLDPEQTSPYSWYQYFLNAGDTVVINYLKWFTFLTESEIAELEVQVAEAPHKREAQRRL 302

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQ--------HMPTISISKDEVSRGMGLLT 354
           A E+TT+VHG    +    AA   F  +             +    +++ E      ++ 
Sbjct: 303 AREMTTLVHGEAATKAVELAAQALFGKASLEDLDEQTLIGAVSETPVAEVEEGEPRTIVD 362

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           L+V AG A S   ARR +K     +NN  IS+E  Q   +D      + L  GKKN    
Sbjct: 363 LLVAAGLADSKGAARRAVKEGGAYVNNVRISDETWQPSEEDLLHGSWVVLRKGKKNFAGV 422

Query: 415 HL 416
             
Sbjct: 423 RF 424


>gi|299145188|ref|ZP_07038256.1| tyrosine--tRNA ligase [Bacteroides sp. 3_1_23]
 gi|298515679|gb|EFI39560.1| tyrosine--tRNA ligase [Bacteroides sp. 3_1_23]
          Length = 430

 Score =  484 bits (1246), Expect = e-134,   Method: Composition-based stats.
 Identities = 146/428 (34%), Positives = 225/428 (52%), Gaps = 22/428 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG +  I    E   L S+  VTAY+G D TA SLH GHL  +M+L   Q+ 
Sbjct: 2   NFVEELRWRGMLQDIMPGTE--ELLSKEQVTAYLGIDPTADSLHIGHLCGVMILRHFQRC 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG-KTDALM 125
           GHKP++L+GG T +IGDPS +   R ++  + ++ N   IK   + F+ + +     A +
Sbjct: 60  GHKPLALIGGATGMIGDPSGKSAERNLLDEETLRHNQACIKNQLAKFLDFESDVPNRAEL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQAYD 183
           +NN  W+    ++D +RE+G   +VN M++ +SV+ RL  E    LSF EF Y +LQ YD
Sbjct: 120 VNNYDWMKDFTFLDFVREVGKHITVNYMMAKDSVKRRLNGEARDGLSFTEFTYQLLQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ L +   C+LQMGGSDQWGNI  G +L  R    ++FALT PL+T A G K GKT SG
Sbjct: 180 FLHLYETKGCKLQMGGSDQWGNITTGAELIRRTNGGEVFALTCPLITKADGGKFGKTESG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKI 301
            IWL+   TSPY F+Q+W N+ D+D   + K  T++   EI+ +     K       +K 
Sbjct: 240 NIWLDPRYTSPYKFYQFWLNVSDSDAERYIKIFTSIEKEEIEALIAEHQKAPHLRLLQKR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDEVS 347
           +A E+T MVH  ++   A  A+   F  +                 + +P   IS+D ++
Sbjct: 300 LAKEVTVMVHSEDDYNAAVDASNILFGNATSEALRKLDEDTLLAVFEGVPQFEISRDVLA 359

Query: 348 RGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+  + L V  A    S  E R+ ++   + +N   ++     +   +      + +  
Sbjct: 360 EGVKAVDLFVDNAAVFASKGEMRKLVQGGGVSLNKEKLAAFDQVVTTANLLDEKYLLVQR 419

Query: 407 GKKNHIIC 414
           GKKN+ + 
Sbjct: 420 GKKNYYLL 427


>gi|333029513|ref|ZP_08457574.1| Tyrosyl-tRNA synthetase [Bacteroides coprosuis DSM 18011]
 gi|332740110|gb|EGJ70592.1| Tyrosyl-tRNA synthetase [Bacteroides coprosuis DSM 18011]
          Length = 430

 Score =  484 bits (1246), Expect = e-134,   Method: Composition-based stats.
 Identities = 150/428 (35%), Positives = 231/428 (53%), Gaps = 22/428 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG +H +    E   L ++  V+AY+G D TA SLH GHL  +M+L  LQ+ 
Sbjct: 2   NFVDELKWRGMVHDMMPGTE--ELLAKEQVSAYVGIDPTADSLHIGHLVSVMMLRHLQRC 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG-TGKTDALM 125
           GHKP +L+GG T +IGDPS +   R ++    ++ N   IK   S F+ +    +  A +
Sbjct: 60  GHKPFALIGGATGMIGDPSGKSLERNLLDDTTLRHNQAAIKKQLSKFLDFDSDAENKAEL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQAYD 183
           +NN  W+ +  ++D +R++G   +VN M++ +SV+ RL  E    LSF EF Y +LQAYD
Sbjct: 120 VNNYDWMKNFTFLDFVRDVGKHITVNYMMAKDSVKKRLTGEARDGLSFTEFTYQLLQAYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           ++ L ++   +LQMGGSDQWGNI  G +L  R    ++F LT PL+T A G K GKT SG
Sbjct: 180 YLHLLESRGVKLQMGGSDQWGNITTGAELIRRTNGQEVFGLTCPLITKADGGKFGKTESG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKI 301
            IWL++  TSPY F+Q+W N+ D D   + K  TTL    +  + +   K  +E   +K 
Sbjct: 240 NIWLDRRYTSPYKFYQFWLNVSDEDAARYIKIFTTLSQEVVTELTEEHSKAPHERILQKR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDEVS 347
           +A EIT MVH  E+ E A  A+   F  S                 + +P   I K  ++
Sbjct: 300 LAKEITVMVHSEEDYEAAVEASEILFGKSTSETLRKIDEDTLLSVFEGVPQFEIEKSLLN 359

Query: 348 RGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G   + L V  A    S  E R+ +K+N + +N   + + ++ I  ++  +   + +  
Sbjct: 360 DGTKAIDLFVDHAEIFPSKGELRKLIKNNGVSLNKEKLDDPEMLITDKELLNNKYLLVQR 419

Query: 407 GKKNHIIC 414
           GKKN+ + 
Sbjct: 420 GKKNYFLV 427


>gi|237716892|ref|ZP_04547373.1| tyrosyl-tRNA synthetase [Bacteroides sp. D1]
 gi|237720657|ref|ZP_04551138.1| tyrosyl-tRNA synthetase [Bacteroides sp. 2_2_4]
 gi|262405660|ref|ZP_06082210.1| tyrosyl-tRNA synthetase [Bacteroides sp. 2_1_22]
 gi|294644399|ref|ZP_06722162.1| tyrosine--tRNA ligase [Bacteroides ovatus SD CC 2a]
 gi|294810392|ref|ZP_06769049.1| tyrosine--tRNA ligase [Bacteroides xylanisolvens SD CC 1b]
 gi|229442875|gb|EEO48666.1| tyrosyl-tRNA synthetase [Bacteroides sp. D1]
 gi|229450408|gb|EEO56199.1| tyrosyl-tRNA synthetase [Bacteroides sp. 2_2_4]
 gi|262356535|gb|EEZ05625.1| tyrosyl-tRNA synthetase [Bacteroides sp. 2_1_22]
 gi|292640234|gb|EFF58489.1| tyrosine--tRNA ligase [Bacteroides ovatus SD CC 2a]
 gi|294442357|gb|EFG11167.1| tyrosine--tRNA ligase [Bacteroides xylanisolvens SD CC 1b]
          Length = 430

 Score =  484 bits (1246), Expect = e-134,   Method: Composition-based stats.
 Identities = 146/428 (34%), Positives = 225/428 (52%), Gaps = 22/428 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG +  I    E   L S+  VTAY+G D TA SLH GHL  +M+L   Q+ 
Sbjct: 2   NFVEELRWRGMLQDIMPGTE--ELLSKEQVTAYLGIDPTADSLHIGHLCGVMILRHFQRC 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG-KTDALM 125
           GHKP++L+GG T +IGDPS +   R ++  + ++ N   IK   + F+ + +     A +
Sbjct: 60  GHKPLALIGGATGMIGDPSGKSAERNLLDEETLRHNQACIKNQLAKFLDFESDVPNRAEL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQAYD 183
           +NN  W+    ++D +RE+G   +VN M++ +SV+ RL  E    LSF EF Y +LQ YD
Sbjct: 120 VNNYDWMKDFTFLDFVREVGKHITVNYMMAKDSVKRRLNGEARDGLSFTEFTYQLLQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ L +   C+LQMGGSDQWGNI  G +L  R    ++FALT PL+T A G K GKT SG
Sbjct: 180 FLHLYETKGCKLQMGGSDQWGNITTGAELIRRTNGGEVFALTCPLITKADGGKFGKTESG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKI 301
            IWL+   TSPY F+Q+W N+ D+D   + K  T++   EI+       +   +   +K 
Sbjct: 240 NIWLDARYTSPYKFYQFWLNVSDSDAERYIKIFTSIEKEEIEALIAEHQEAPHLRLLQKR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDEVS 347
           +A E+T MVH  ++   A  A+   F  +                 + +P   IS+D ++
Sbjct: 300 LAKEVTVMVHSEDDYNAAVDASNILFGNATSEALRKLDEDTLLAVFEGVPQFEISRDVLA 359

Query: 348 RGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+  + L V  A    S  E R+ ++   + +N   ++     +   D      + +  
Sbjct: 360 EGVKAVDLFVDNAAVFASKGEMRKLVQGGGVSLNKEKLAAFDQVVTTADLLDEKYLLVQR 419

Query: 407 GKKNHIIC 414
           GKKN+ + 
Sbjct: 420 GKKNYYLL 427


>gi|163791165|ref|ZP_02185583.1| tyrosyl-tRNA synthetase [Carnobacterium sp. AT7]
 gi|159873560|gb|EDP67646.1| tyrosyl-tRNA synthetase [Carnobacterium sp. AT7]
          Length = 421

 Score =  484 bits (1246), Expect = e-134,   Method: Composition-based stats.
 Identities = 148/425 (34%), Positives = 223/425 (52%), Gaps = 19/425 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  R  I+Q ++   L  L  Q  V  Y G D T  S+H GHL   M+L   Q  
Sbjct: 2   NIIDELEWRDAINQQTDEVGLKKLIDQKAVGLYCGVDPTGDSMHIGHLIPFMILKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+P+ ++GG T  IGDPS + E R +  S+++Q N++K+          G  +    M+
Sbjct: 62  GHRPVIVIGGATGSIGDPSGKSEERVLQTSEQVQNNVDKLTHQMEKLFDAGKNENSIRMV 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I  +D LR IG  F+VN MLS + V SRL  E  +SF EF Y ILQ+ DF+ 
Sbjct: 122 NNLDWTKEISLLDFLRNIGKSFNVNTMLSKDIVASRL--ETGISFTEFTYQILQSIDFLH 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKLFALTSPLLTTASGTKMGKTLSGA 244
           L ++ D +LQ+GG+DQWGNI  G++   + +    + + LT PL+  A GTK GKT  GA
Sbjct: 180 LYQHEDVQLQIGGADQWGNITAGLEYIRKQEGSEAEAYGLTIPLMLKADGTKFGKTAGGA 239

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKII 302
           IWL+ E T+PY F+Q+W N DD DVV + K  T L   EID +A+         EA+K +
Sbjct: 240 IWLDPEKTTPYEFYQFWLNQDDRDVVKYLKYFTFLTKEEIDALAEKIATEPHKREAQKTL 299

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGL 352
           A+E+T  VHG +  + A       F   + S          ++MPT    K+E +    L
Sbjct: 300 ASEMTLFVHGEQALKDAEKITAALFSGDVKSLTADQIEEGFKNMPTFEAPKEEKNIVEWL 359

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           + ++   G   S  +AR  +K+ A+ +N   +++ +  +  ++      I +  GKK + 
Sbjct: 360 VDVV---GIEPSRRQAREDIKNGALSMNGEKVTDVEAIVTPENSFDERFILIRKGKKKYF 416

Query: 413 ICHLC 417
           +  L 
Sbjct: 417 LVKLV 421


>gi|118469309|ref|YP_888052.1| tyrosyl-tRNA synthetase [Mycobacterium smegmatis str. MC2 155]
 gi|118170596|gb|ABK71492.1| tyrosyl-tRNA synthetase [Mycobacterium smegmatis str. MC2 155]
          Length = 440

 Score =  483 bits (1245), Expect = e-134,   Method: Composition-based stats.
 Identities = 148/425 (34%), Positives = 231/425 (54%), Gaps = 18/425 (4%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +  L  L  RG I Q ++   L    ++G +T Y G+D TA SLHAGHL  L+ L   Q+
Sbjct: 10  TGILDELDWRGLIAQSTDREALASDLAKGPMTVYSGFDPTAPSLHAGHLVPLLTLRRFQQ 69

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+PI L GG T +IGDP    E R M     + +  ++I+G    F+++    T A++
Sbjct: 70  AGHRPIVLAGGATGMIGDPRDTGE-RTMNTEDTVADWADRIRGQLERFVEFDDSPTGAIV 128

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
            NN TW   +  I  LR+IG +FSVN ML  E+VR RL+    +S+ EF+YM+LQA D+V
Sbjct: 129 ENNLTWTGELSAISFLRDIGKYFSVNVMLDRETVRRRLE-GDGISYTEFSYMLLQANDYV 187

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT-LSGA 244
           EL + + C LQ+GGSDQWGNI+ G+ L  +     + A+T+PL+T + G K GK+   G 
Sbjct: 188 ELHQRHGCALQVGGSDQWGNIVAGVRLVRQKIGATVHAMTTPLVTDSEGKKFGKSTGGGN 247

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKII 302
           +WL+ EMTSPY ++QY+ N  DADV+ + +  T L   E+  +A       +E  A++ +
Sbjct: 248 LWLDPEMTSPYAWYQYFVNTADADVLGYLRWFTFLTPDELAELADATENRPHERAAQRRL 307

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISK----------DEVSRG--M 350
           A E+TT+VHG    +    A+   F     +  +   ++S            E++ G   
Sbjct: 308 ARELTTLVHGEGATKSVEYASRALFGRGELA-DLDESTLSAALREAGNGQVAELAPGGPD 366

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            ++ L+V  G + S   ARR +    + +NN+ + +++   +  DF   G + L  GK++
Sbjct: 367 SIVDLLVATGLSNSKGAARRTVAEGGVYVNNARVESDEWVPQESDFLHEGWLVLRRGKRH 426

Query: 411 HIICH 415
                
Sbjct: 427 IAGVR 431


>gi|254673167|emb|CBA08020.1| Tyrosyl-tRNA synthetase [Neisseria meningitidis alpha275]
 gi|325135621|gb|EGC58238.1| tyrosyl-tRNA synthetase [Neisseria meningitidis M0579]
          Length = 431

 Score =  483 bits (1245), Expect = e-134,   Method: Composition-based stats.
 Identities = 156/427 (36%), Positives = 226/427 (52%), Gaps = 21/427 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            +  L  R  I Q ++   LD L ++  +  Y G+D TA SLH GHL  ++ L   Q+ G
Sbjct: 3   VIQDLQSRDLIAQTTDIEALDALLNEQKIALYCGFDPTADSLHIGHLLPVLALRRFQQAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H PI+L+GG T +IGDPSF+   R +  ++ +   +E I+   + F+ +  G   A+M N
Sbjct: 63  HTPIALVGGATGMIGDPSFKAAERSLNSAETVAGWVESIRSQLTPFLSF-EGGNAAIMAN 121

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDFVE 186
           N  W   +  +D LR+IG  FSVN ML+ ESV+ R+ R    +SF EF Y +LQ YDF E
Sbjct: 122 NADWFGKMNCLDFLRDIGKHFSVNAMLNKESVKQRIDRDGAGISFTEFAYSLLQGYDFAE 181

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L K +   L++GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  GA+W
Sbjct: 182 LNKRHGAVLEIGGSDQWGNITAGIDLTRRLYQKQVFGLTLPLVTKSDGTKFGKTEGGAVW 241

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINEAKKIIAT 304
           LN + TSPY F+Q+W  + DADV  F K  T L + EID +           EA++I+A 
Sbjct: 242 LNAKKTSPYQFYQFWLKVADADVYKFLKYFTFLSIEEIDAIEAKDKASGSKPEAQRILAE 301

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTLIVK 358
           E+T ++HG E    A   +   F     S      + +    +   EVS G+ ++  +VK
Sbjct: 302 EMTRLIHGEEALAAAQRISESLFAEDQSSLTESDFEQLALDGLPAFEVSDGINVVEALVK 361

Query: 359 AGFATSTNEARRHLKSNAIKINNSIIS-----------NEKLQIKLQDFDSTGNIKLSFG 407
            G A+S  EAR  + S A+ +N                ++   +  +         L  G
Sbjct: 362 TGLASSNKEARGFVNSKAVLLNGKPAEANNPNHAAERPDDACLLNGEHKRFGKYTILRRG 421

Query: 408 KKNHIIC 414
           K+NH + 
Sbjct: 422 KRNHALL 428


>gi|225572274|ref|ZP_03781138.1| hypothetical protein RUMHYD_00568 [Blautia hydrogenotrophica DSM
           10507]
 gi|225040258|gb|EEG50504.1| hypothetical protein RUMHYD_00568 [Blautia hydrogenotrophica DSM
           10507]
          Length = 422

 Score =  483 bits (1245), Expect = e-134,   Method: Composition-based stats.
 Identities = 176/411 (42%), Positives = 264/411 (64%), Gaps = 7/411 (1%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG I Q+++ +E+  L + G  T YIG+D TA SLH GH   L L+  LQ  G
Sbjct: 16  IYEELQARGLIAQVTDEKEIRELVNAGKATFYIGFDPTADSLHVGHFMALCLMKRLQMAG 75

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           ++PI+L+GGGT ++GDPS R + R MM    I  NIE  K   S FI++G GK  A+M+N
Sbjct: 76  NRPIALLGGGTGMVGDPSGRTDMRPMMTVDTINHNIECFKKQMSRFIEFGEGK--AIMVN 133

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  + Y++LLRE+G+ FSVNRML+ E  + R+K  + LSF EFNYMI+Q+YDF  L
Sbjct: 134 NADWLLDLNYVELLREVGAHFSVNRMLAAECYKQRMK--EGLSFFEFNYMIMQSYDFYRL 191

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
             ++ C++Q GG DQW N++ G +L  R      +A+T  LL  + G KMGKT SGA+WL
Sbjct: 192 FLDHGCQMQFGGDDQWSNMLAGTELIRRKLGENAYAMTQTLLLNSEGKKMGKTQSGAVWL 251

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           + + T+P+ F+QYWRN+DDADV+   + LT LP+ +ID M K +G ++N+AK+I+A E+T
Sbjct: 252 DPDKTTPFEFYQYWRNVDDADVLHCLRLLTFLPLEQIDEMDKWEGSQLNQAKEILAHELT 311

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTN 366
            +VHG +EA+KA   A   F  S  S+H+PT+ +S+++++ G + +++L++KA    + N
Sbjct: 312 ALVHGEDEAQKAEAGAKALFTGSGDSEHIPTVELSEEDLTDGEIDIISLLIKAELVGTRN 371

Query: 367 EARRHLKSN-AIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           E RR +  N  + I+   I++ K Q+K +  +  G I +  GKK+     +
Sbjct: 372 EGRRAITPNTCVTIDGEKIADIKYQVKKEALEGDG-ILVGKGKKSFKKVCV 421


>gi|125623269|ref|YP_001031752.1| tyrosyl-tRNA synthetase [Lactococcus lactis subsp. cremoris MG1363]
 gi|189083658|sp|A2RIB1|SYY_LACLM RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|124492077|emb|CAL97006.1| Tyrosine-tRNA ligase [Lactococcus lactis subsp. cremoris MG1363]
 gi|300070019|gb|ADJ59419.1| tyrosyl-tRNA synthetase [Lactococcus lactis subsp. cremoris NZ9000]
          Length = 419

 Score =  483 bits (1245), Expect = e-134,   Method: Composition-based stats.
 Identities = 143/421 (33%), Positives = 224/421 (53%), Gaps = 18/421 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L  RG + Q ++   L    ++ +V+ Y+GYD TA SLH G+L  ++ +  LQ  
Sbjct: 2   NIFDELKARGLVFQTTDEAALSKALTEDMVSYYVGYDPTADSLHLGNLVLILTMKRLQMA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP +L+GG T +IGDPSF+D  R +     + +   KI+     F+ +  G+  A M 
Sbjct: 62  GHKPYALVGGATGLIGDPSFKDSERSLQTKDTVTKWSGKIRSQLERFLDFENGENKAEMT 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W  ++ +ID LR++G  F+VN M+S +SV+SR++    +S+ EF Y I+Q YDF E
Sbjct: 122 NNYNWFENLTFIDFLRDVGKHFTVNYMISKDSVKSRMES--GISYTEFAYQIMQGYDFYE 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + ++  LQ+GGSDQWGN+  G +L  R    +   +T PL+T ++G K GK+   AIW
Sbjct: 180 LNQLHNVTLQLGGSDQWGNMTAGTELLRRKANKQGHVITIPLITDSTGKKFGKSEGNAIW 239

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIAT 304
           L+ + TSPY  +Q+W N+DDAD V   K  T L + EI  + +      +E  A+K++A 
Sbjct: 240 LDADKTSPYEMYQFWLNVDDADAVKMLKIFTFLSLEEIAEIEEQFEAARHERLAQKVLAR 299

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQ-----------HMPTISISKDEVSRGMGLL 353
           E+ ++VHG+E  E+A   +   F      Q             P   I+ DE    + L+
Sbjct: 300 EVVSLVHGKEAYEQAVKTSEILFGGGDLRQLDAKSILTGLKAAPQHQIAPDE---DLTLI 356

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            L++  G A S  +AR  + + AI IN   +      +   D        +  GKK + +
Sbjct: 357 ELLISVGIAPSKRQAREDITNGAIYINGERVQELDYVLTDSDKIENRLTVIRRGKKKNFV 416

Query: 414 C 414
            
Sbjct: 417 L 417


>gi|329848845|ref|ZP_08263873.1| tyrosyl-tRNA synthetase [Asticcacaulis biprosthecum C19]
 gi|328843908|gb|EGF93477.1| tyrosyl-tRNA synthetase [Asticcacaulis biprosthecum C19]
          Length = 433

 Score =  483 bits (1245), Expect = e-134,   Method: Composition-based stats.
 Identities = 194/413 (46%), Positives = 274/413 (66%), Gaps = 10/413 (2%)

Query: 3   AFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
            F +  L+ L+ RGFIHQ +    +      G+V  Y G+D TA SLH GHL  +MLL  
Sbjct: 28  TFMNALLTTLTRRGFIHQCTQTDGVTDAFRSGIVPVYAGFDATADSLHVGHLLPIMLLRR 87

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD 122
           LQ+ GHKPI L+GGGT+ IGDPSFR +SR M+   +I  NI  I+G+F  F+ +G G TD
Sbjct: 88  LQRAGHKPIVLIGGGTTRIGDPSFRSDSRPMLTDAQIATNIAGIRGVFERFLAFGDGATD 147

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
           A+++NN  WL  + YID+LR++G  FSVNRMLSF+SV+SRL+R++SLSFLEFNYMILQAY
Sbjct: 148 AILVNNADWLDRLGYIDMLRDVGPHFSVNRMLSFDSVKSRLERQESLSFLEFNYMILQAY 207

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DF+EL + Y CRLQ+GG+DQWGNI+ GIDL  R+   ++F LT+PLLTTASG KMGKT +
Sbjct: 208 DFLELNRRYGCRLQIGGADQWGNIVSGIDLVRRMAGEEVFGLTAPLLTTASGAKMGKTAA 267

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKII 302
           GA+WLN +  SPY++WQ+WRN +D DV  F +  T L  ++I  +  L+G +IN AK ++
Sbjct: 268 GAVWLNGDRLSPYDYWQFWRNSEDRDVGRFLRLFTDLDEADIVHLESLEGADINAAKTVL 327

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFA 362
           A E T + HG +   +AA AA   F        +P I +S       + ++ L+V+AG  
Sbjct: 328 ADEATRLAHGEDARMRAAEAAAGAFGDGESLNGLPVIEVSGS-----VTVVDLLVQAGLV 382

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +S +EARR + +   ++++ ++ +E   I + D      +KLS G+K H++  
Sbjct: 383 SSKSEARRLIANRGARLDDEVVEDEGAVITVND-----PLKLSAGRKKHVLIR 430


>gi|153807144|ref|ZP_01959812.1| hypothetical protein BACCAC_01421 [Bacteroides caccae ATCC 43185]
 gi|149130264|gb|EDM21474.1| hypothetical protein BACCAC_01421 [Bacteroides caccae ATCC 43185]
          Length = 430

 Score =  483 bits (1245), Expect = e-134,   Method: Composition-based stats.
 Identities = 146/428 (34%), Positives = 224/428 (52%), Gaps = 22/428 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG +  I    E   L  +  VTAY+G D TA SLH GHL  +M+L   Q+ 
Sbjct: 2   NFVEELRWRGMLQDIMPGTE--ELLIKEQVTAYLGIDPTADSLHIGHLCGVMILRHFQRC 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG-KTDALM 125
           GHKP++L+GG T +IGDPS +   R ++  + ++ N   IK   + F+ + +     A +
Sbjct: 60  GHKPLALIGGATGMIGDPSGKSAERNLLDEETLRHNQACIKNQLAKFLDFESDVPNRAEL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQAYD 183
           +NN  W+    ++D +RE+G   +VN M++ +SV+ RL  E    LSF EF Y +LQ YD
Sbjct: 120 VNNYDWMKDFTFLDFVREVGKHITVNYMMAKDSVKRRLNGEARDGLSFTEFTYQLLQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ L +   C+LQMGGSDQWGNI  G +L  R    ++FALT PL+T A G K GKT SG
Sbjct: 180 FLHLYETKGCKLQMGGSDQWGNITTGAELIRRTNGGEVFALTCPLITKADGGKFGKTESG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKKI 301
            IWL+   TSPY F+Q+W N+ D+D   + K  T++   EI+ +         +   +K 
Sbjct: 240 NIWLDPRYTSPYKFYQFWLNVSDSDAERYIKIFTSIEKEEIEALIAEHQAAPHLRILQKR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDEVS 347
           +A E+T MVH  ++   A  A+   F  +                 + +P   IS+D ++
Sbjct: 300 LAKEVTVMVHSEDDYNAAVDASNILFGNATSEALRKLDEDTLLAVFEGVPQFEISRDALT 359

Query: 348 RGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+  + L V  A    S  E R+ ++   + +N   ++     I   D      + +  
Sbjct: 360 GGVKAVDLFVDNAAVFASKGEMRKLVQGGGVSLNKEKLAAFDQVITAADLLDEKYLLVQR 419

Query: 407 GKKNHIIC 414
           GKKN+ + 
Sbjct: 420 GKKNYYLL 427


>gi|227495383|ref|ZP_03925699.1| tyrosine--tRNA ligase [Actinomyces coleocanis DSM 15436]
 gi|226831137|gb|EEH63520.1| tyrosine--tRNA ligase [Actinomyces coleocanis DSM 15436]
          Length = 421

 Score =  483 bits (1244), Expect = e-134,   Method: Composition-based stats.
 Identities = 157/425 (36%), Positives = 238/425 (56%), Gaps = 19/425 (4%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           SD +  L  RG I Q ++  +L    S G VT Y GYD TA SLH GHL QL+L+  LQ 
Sbjct: 2   SDIIEELQWRGLIRQHTDLTKLREALSNGPVTFYCGYDPTAPSLHHGHLVQLILMRHLQN 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+P++L+GG T +IGDP    E R +   + ++  +EK++   S F+ +  G+  A+M
Sbjct: 62  AGHRPLALVGGATGLIGDPRMSGE-RTLQPREVVEGWVEKLRAQISRFLSF-EGENAAVM 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  W   +  IDLLR++G +F +  ML  E+V  RL  E+ +S+ EF+Y ILQA DF+
Sbjct: 120 VNNLDWTSELSAIDLLRDLGKYFRMGTMLKKEAVSRRLASEEGISYTEFSYQILQANDFL 179

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           +L + Y C L+ GG DQWGN+I G+DL  R +   +  +T+PL+T A GTK GK+  GAI
Sbjct: 180 QLYRRYGCTLETGGDDQWGNLIGGLDLIHRTEGADVHVMTTPLITKADGTKFGKSEGGAI 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIA 303
           WL++++ SPY F+Q+W N+DDADVV F K  T L  +EI+R+ K   +E    EA+K +A
Sbjct: 240 WLSEDLLSPYAFYQFWLNVDDADVVRFLKVFTFLERAEIERLEKAVAEEPFRREAQKALA 299

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIH-----------SQHMPTISISKDEVSRGMGL 352
             +T +VHG E+  +   A    +                + H+P+  I+  E      +
Sbjct: 300 ASVTELVHGGEKLAQVLAATEALWGSGDLRAVDAATLASATDHLPSGEITLGE----ATI 355

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           +  +V AG       ARR  +S    +NN  + +    +   D  + G I +  G++N  
Sbjct: 356 VDALVAAGLEKGRGAARRTAESGGAYLNNVKVEDVDAPLTAADRLADGTILIRKGRRNLA 415

Query: 413 ICHLC 417
           +  + 
Sbjct: 416 VIRVV 420


>gi|332971567|gb|EGK10517.1| tyrosine--tRNA ligase [Kingella kingae ATCC 23330]
          Length = 432

 Score =  483 bits (1244), Expect = e-134,   Method: Composition-based stats.
 Identities = 153/427 (35%), Positives = 229/427 (53%), Gaps = 21/427 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            +  L  RG I Q ++  EL  L     +  Y G+D TA SLH GHL  +++L   Q  G
Sbjct: 4   LILDLQARGLIAQTTDINELSKLLDSEKIALYCGFDPTADSLHIGHLLPVLVLRRFQNAG 63

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H P++L+GG T +IGDPSF+   R +   + +   +  I+     F+K+  G   A+M N
Sbjct: 64  HTPVALVGGATGMIGDPSFKAVERSLNTPETVAGWVNSIRDQLKPFLKF-DGANPAIMEN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDFVE 186
           N  W  ++  +D LR+IG  FSVN ML+ ESV+ R++RE Q +SF EF+Y +LQ YDF E
Sbjct: 123 NANWFGAMNCLDFLRDIGKHFSVNAMLAKESVKQRIEREDQGISFTEFSYALLQGYDFAE 182

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L K ++ +LQ+GGSDQWGNI  G +   RL    +  +T PL+T A GTK GKT  GA+W
Sbjct: 183 LNKRHNVQLQIGGSDQWGNITWGTETTRRLNQKSVHGMTLPLVTKADGTKFGKTEGGAVW 242

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINEAKKIIAT 304
           L+ + TSPYNF+Q+W  + DADV  F K  T L + +ID +        +  EA++I+A 
Sbjct: 243 LDAKKTSPYNFYQFWLKVADADVYKFLKYFTFLTVEQIDEIEANDKASGKKPEAQRILAK 302

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTLIVK 358
           E+T ++HG    E A       F              +    +   EVS  + ++  +V+
Sbjct: 303 EMTRLIHGEAALEAAQRITQSLFSGDESGLTEQDYAQLALDGLPAFEVSGNLNVVEALVQ 362

Query: 359 AGFATSTNEARRHLKSNAIKINNSIIS-----------NEKLQIKLQDFDSTGNIKLSFG 407
           AG A S  EAR  ++S A+ IN + ++           ++K  +  +         +  G
Sbjct: 363 AGLAQSNKEARGFVQSGAVLINGTAVAENNPNHAPEKPDDKFMLTDEHKRFGKYTIVKRG 422

Query: 408 KKNHIIC 414
           K+NH + 
Sbjct: 423 KRNHALL 429


>gi|42526373|ref|NP_971471.1| tyrosyl-tRNA synthetase [Treponema denticola ATCC 35405]
 gi|81570312|sp|Q73PD8|SYY_TREDE RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|41816485|gb|AAS11352.1| tyrosyl-tRNA synthetase [Treponema denticola ATCC 35405]
          Length = 406

 Score =  483 bits (1244), Expect = e-134,   Method: Composition-based stats.
 Identities = 170/406 (41%), Positives = 243/406 (59%), Gaps = 7/406 (1%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L IL ERGFI Q ++ + L     +G +  Y G D T  SLH GH+  +  L  L + GH
Sbjct: 5   LKILQERGFIQQCTDLQALSDRMDKGQIAFYTGTDPTGPSLHIGHMVPIFALKHLCREGH 64

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           K + L+GGGTS IGDPS + E R+M+   E+ +N   I+     F+       +   +NN
Sbjct: 65  KGVVLVGGGTSRIGDPSGKTEMRKMLSYDELDKNAASIQKQIEKFL--AKDIKNVRFVNN 122

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
           + WL  + YID LR+IGS FSVN+MLSFE+ + R+  E  LSFLEFNY +LQ+YDF+ L 
Sbjct: 123 KDWLADLNYIDFLRDIGSHFSVNKMLSFEAYKKRM--ETGLSFLEFNYQLLQSYDFLMLN 180

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
           +NY+  LQ+GG DQWGN++ G DL  R    ++FALT  L+T A G KMGK+  GAI+L+
Sbjct: 181 QNYNIELQIGGDDQWGNMVAGSDLIRRKGGGEVFALTFSLVTRADGQKMGKSEKGAIFLD 240

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITT 308
             + SPY+F+QYWRN  DADV  F    T L + EI  +      +IN+AK+ +A E+T 
Sbjct: 241 TALVSPYDFFQYWRNTADADVEKFMLLFTFLSIEEIKSVC---AGDINKAKERLAFEVTA 297

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
           ++HG+EEAEKA   A   F    +   MPT ++S  +++ G+G++ L  +AG A++ ++A
Sbjct: 298 LIHGKEEAEKALEGARAAFSGGGNKDAMPTANLSLSKLNEGIGIIDLFAEAGLASTKSDA 357

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           RR ++     IN   IS+ K  I  +  D    + L  GKK  +  
Sbjct: 358 RRLVEQGGAFINEEKISDIKALIGKEKLDKDNEMILRAGKKRFMRI 403


>gi|134101758|ref|YP_001107419.1| tyrosyl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338]
 gi|133914381|emb|CAM04494.1| tyrosyl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338]
          Length = 433

 Score =  483 bits (1244), Expect = e-134,   Method: Composition-based stats.
 Identities = 147/420 (35%), Positives = 225/420 (53%), Gaps = 13/420 (3%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  LS RG I Q ++   L      G +T Y G+D TA SLHAGHL  ++ L   Q+ G
Sbjct: 14  ILDDLSWRGLIAQSTDLDTLRSDLDAGPLTLYAGFDPTAPSLHAGHLIPILTLRRFQQAG 73

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+P+ L GG T +IGDP    E R +  +  + E  E+I+   S+F+ +    T A+M N
Sbjct: 74  HRPVVLAGGATGLIGDPRDVGE-RNLHDADTVVEWTERIRRQLSAFVDFDDTPTGAIMAN 132

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W   +     LR+IG  FSVN ML+ E+VR RL+ +  +S+ EF+YM+LQA D+VEL
Sbjct: 133 NADWTADLPVTAFLRDIGKHFSVNTMLARETVRRRLETD-GISYTEFSYMLLQANDYVEL 191

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT-LSGAIW 246
            + +   LQ+GGSDQWGNII G+DL  +     + ALT PL+T A G K GK+   G +W
Sbjct: 192 HRRHGTSLQLGGSDQWGNIIAGVDLVRKQNGAAVHALTLPLVTDAEGRKFGKSTGGGNVW 251

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIAT 304
           L+  MTSPY ++QY+ N  DADV  + +  T L   EI+ + +   +  ++   ++ +A 
Sbjct: 252 LDPAMTSPYAWYQYFVNAADADVAKYLRLFTFLSREEIEELERTTAEKPQLRAGQRRLAE 311

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQ--------HMPTISISKDEVSRGMGLLTLI 356
           E+TT+VHG ++  +  TA+   F                M  +   + ++S G  ++ L+
Sbjct: 312 ELTTLVHGEQQTRQVVTASQALFGRGELRDLDESTLDAAMAEVPTGEVDLSDGPTIVELL 371

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V+ G       ARR +      +NNS I++E      +D      + +  GK++     +
Sbjct: 372 VETGLVAGRGAARRTVNEGGAYVNNSKIADETWSPSKEDLLHGRWLVVRRGKRHTAGVKV 431


>gi|255693353|ref|ZP_05417028.1| tyrosine--tRNA ligase [Bacteroides finegoldii DSM 17565]
 gi|260620930|gb|EEX43801.1| tyrosine--tRNA ligase [Bacteroides finegoldii DSM 17565]
          Length = 430

 Score =  483 bits (1244), Expect = e-134,   Method: Composition-based stats.
 Identities = 147/428 (34%), Positives = 224/428 (52%), Gaps = 22/428 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG +  I    E   L S+  VTAY+G D TA SLH GHL  +M+L   Q+ 
Sbjct: 2   NFVEELRWRGMLQDIMPGTE--ELLSKEQVTAYLGIDPTADSLHIGHLCGVMILRHFQRC 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG-KTDALM 125
           GHKP++L+GG T +IGDPS +   R ++  + ++ N   IK   + F+ + +     A +
Sbjct: 60  GHKPLALIGGATGMIGDPSGKSAERNLLDEETLRHNQACIKKQLAKFLDFESDVPNRAEL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQAYD 183
           +NN  W+    ++D  R++G   +VN M++ +SV+ RL  E    LSF EF Y +LQ YD
Sbjct: 120 VNNYDWMKDFSFLDFARKVGKHITVNYMMAKDSVKRRLNGEARDGLSFTEFTYQLLQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ L +   C+LQMGGSDQWGNI  G +L  R    ++FALT PL+T A G K GKT SG
Sbjct: 180 FLHLYETKGCKLQMGGSDQWGNITTGAELIRRTNGGEVFALTCPLITKADGGKFGKTESG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKI 301
            IWL+   TSPY F+Q+W N+ D+D   + K  T++   EI+       +   +   +K 
Sbjct: 240 NIWLDSRYTSPYKFYQFWLNVSDSDAERYIKIFTSIEKEEIEALIAEHREAPHLRILQKR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDEVS 347
           +A E+T MVH  E+   A  A+   F  +                 + +P   IS+D ++
Sbjct: 300 LAKEVTVMVHSEEDYNAAVDASNILFGNATSEALRKLDEDTLLAVFEGVPQFEISRDALA 359

Query: 348 RGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+  + L V  A    S  E R+ ++   + +N   ++     I   D      + +  
Sbjct: 360 EGVKAVDLFVDNAAVFASKGEMRKLVQGGGVSLNKEKLAAFDQVITAADLLDEKYLLVQR 419

Query: 407 GKKNHIIC 414
           GKKN+ + 
Sbjct: 420 GKKNYYLL 427


>gi|225024266|ref|ZP_03713458.1| hypothetical protein EIKCOROL_01139 [Eikenella corrodens ATCC
           23834]
 gi|224943291|gb|EEG24500.1| hypothetical protein EIKCOROL_01139 [Eikenella corrodens ATCC
           23834]
          Length = 433

 Score =  483 bits (1244), Expect = e-134,   Method: Composition-based stats.
 Identities = 156/429 (36%), Positives = 228/429 (53%), Gaps = 21/429 (4%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +  +  L  RG I Q ++   L  L ++  +T Y G+D TA SLH GHL  ++ L   Q+
Sbjct: 3   ASLIQDLQARGLIAQTTDIEALSTLLNEQKITLYCGFDPTADSLHIGHLLPVLALRRFQQ 62

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH PI+L+GG T +IGDPSF+   R +  ++ +   +E I+     F+ +  G+  A+M
Sbjct: 63  AGHTPIALVGGATGMIGDPSFKAVERSLNSAETVAGWVESIRNQLKPFLSF-EGENAAIM 121

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYDF 184
            NN  W  S+  +D LR+IG  FSVN ML+ ESV+ R+ R+   +SF EF Y +LQ+YDF
Sbjct: 122 ANNADWFGSMNCLDFLRDIGKHFSVNAMLNKESVKQRIDRDDVGISFTEFAYTLLQSYDF 181

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
            EL K +   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  GA
Sbjct: 182 AELNKRHGAMLQIGGSDQWGNITNGIDLTRRLNQKQVFGLTLPLVTKSDGTKFGKTEGGA 241

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINEAKKII 302
           +WLN + TSPY F+Q+W  + DADV  F K  T LP+ EI  +           EA++I+
Sbjct: 242 VWLNAKKTSPYQFYQFWLKVADADVYKFLKYFTFLPIEEIGAIEAKDQASGTKPEAQRIL 301

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTLI 356
           A E+T ++HG    + A       F     S      + +    +   EVS  + ++  +
Sbjct: 302 AEEMTRLIHGETALQAAQRITESLFAEDQSSLTESDFEQLALDGLPAFEVSGSLNVVEAL 361

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIIS-----------NEKLQIKLQDFDSTGNIKLS 405
           VK G A+S  EAR  + S A+ +N                ++   +            + 
Sbjct: 362 VKTGLASSNKEARGFVNSKAVLLNGQAAELNNPNHAAERPDDAYLLTDAHKRFGKYTIVR 421

Query: 406 FGKKNHIIC 414
            GK+NH + 
Sbjct: 422 RGKRNHALL 430


>gi|184154544|ref|YP_001842884.1| tyrosyl-tRNA synthase [Lactobacillus fermentum IFO 3956]
 gi|227514191|ref|ZP_03944240.1| tyrosine--tRNA ligase [Lactobacillus fermentum ATCC 14931]
 gi|254783611|sp|B2GF15|SYY_LACF3 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|183225888|dbj|BAG26404.1| tyrosyl-tRNA synthase [Lactobacillus fermentum IFO 3956]
 gi|227087454|gb|EEI22766.1| tyrosine--tRNA ligase [Lactobacillus fermentum ATCC 14931]
          Length = 417

 Score =  483 bits (1244), Expect = e-134,   Method: Composition-based stats.
 Identities = 143/420 (34%), Positives = 219/420 (52%), Gaps = 16/420 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG ++Q ++   L  L  +  +  Y G D +  SLH GHL   M+L   Q  
Sbjct: 2   NIIDELKWRGALNQATDEEGLRELTEEKKIALYCGTDPSGDSLHIGHLIPFMMLKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP+ L+GGGT  IGDPS R   R +    ++++N++ +            G  +  ++
Sbjct: 62  GHKPVILIGGGTGAIGDPSGRKTERDLETRSKLEQNVQSLTKQMIRLF----GTENFTIV 117

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL     ID LR+ G  F++N ML+ E V SRL     +SF EF Y ILQA DF+ 
Sbjct: 118 NNYDWLSKFTMIDFLRDYGKLFNLNTMLNKEVVASRLDA--GISFTEFTYQILQAIDFLH 175

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKLFALTSPLLTTASGTKMGKTLSGA 244
           L ++ D +LQ+GGSDQWGNI  GIDL  +++    K+F +T PL+  A GTK GKT  GA
Sbjct: 176 LYRHNDVQLQIGGSDQWGNITSGIDLIHKVEGSDTKVFGVTIPLMLKADGTKFGKTAGGA 235

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKII 302
           +WL+ E TSPY F+Q+W N DD DVV + K  T L   EI  + +    E    EA++ +
Sbjct: 236 VWLDPEKTSPYEFYQFWLNQDDRDVVKYLKYFTFLSQEEIAGLEEKVQTEPWKREAQRRL 295

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRGMGLLTLI 356
           A E+TT VHG+   ++A   +   F  +I       +        S +  +    ++  +
Sbjct: 296 AQEVTTFVHGQAATDQAEKISAILFSGNIQDLTTAEVEQAFAGTPSVEVSAEPANIVDWL 355

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V      S  +AR  +K+ AI++N   +++ +  +          + +  GKKN+ +  +
Sbjct: 356 VDTKIEPSKRQAREDVKNGAIRVNGEKVTDLEATLDPTAKFDGKYVVIRRGKKNYTLAKV 415


>gi|300814031|ref|ZP_07094321.1| tyrosine--tRNA ligase [Peptoniphilus sp. oral taxon 836 str. F0141]
 gi|300511855|gb|EFK39065.1| tyrosine--tRNA ligase [Peptoniphilus sp. oral taxon 836 str. F0141]
          Length = 409

 Score =  483 bits (1243), Expect = e-134,   Method: Composition-based stats.
 Identities = 171/411 (41%), Positives = 262/411 (63%), Gaps = 5/411 (1%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
            +   +L ERGFI  +++   L  +  +  +  YIG+D TA SL  GH  Q+ ++  +QK
Sbjct: 3   KNVFDVLKERGFIDSVTDEENLKDVLEKEKIKFYIGFDATADSLTLGHFLQIRVMQHMQK 62

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH P++L+GGGT+ IGDPS +++ R++M  Q I  N +  K   S F+ +  GK   ++
Sbjct: 63  QGHIPVALLGGGTTSIGDPSGKNDMRKLMDRQTIDHNAKCFKEQISRFVDFSDGKG--MI 120

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           LNN  WL ++ +++ +R IG  FSVNRML+F+  ++R+  E+ L+F EF+YM++Q+YDF+
Sbjct: 121 LNNGDWLLNLNFLEFMRTIGVHFSVNRMLTFDCYKNRM--EKGLTFFEFSYMLMQSYDFL 178

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L +NY  +L++GGSDQW NII G +L  +L+  K+F +T  LL TA+G KMGKT  GAI
Sbjct: 179 HLYRNYGVKLELGGSDQWSNIIGGYELVRKLEEEKVFGMTFKLLITANGVKMGKTEKGAI 238

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
           WL+KE TSPY  +QY RN DD DV+ F K LT L M EI    KL+G+E+N+AK+++A E
Sbjct: 239 WLSKEKTSPYEMFQYLRNTDDRDVIKFLKLLTLLDMDEIKEYEKLEGQELNKAKEVLAYE 298

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           +   VHG EEA+KA  A+   F     ++++P+  ++K+ +  G+G+L ++ + GF+ + 
Sbjct: 299 VVKDVHGEEEAKKALEASKAMFGGQKTAENIPSTLMNKESLQEGIGILNILTEIGFSKTN 358

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +EARR +    I IN+  I++  L I L  F     I L  GKK +   +L
Sbjct: 359 SEARRLINQGGISINDEKITDPALIITLDKFKDD-EIILRKGKKLYHKINL 408


>gi|227873338|ref|ZP_03991599.1| tyrosine--tRNA ligase [Oribacterium sinus F0268]
 gi|227840816|gb|EEJ51185.1| tyrosine--tRNA ligase [Oribacterium sinus F0268]
          Length = 406

 Score =  483 bits (1243), Expect = e-134,   Method: Composition-based stats.
 Identities = 172/410 (41%), Positives = 243/410 (59%), Gaps = 6/410 (1%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
                L ERG I Q++N  E+  + ++G    YIG+D TA SLH GH   L L+  LQ  
Sbjct: 2   GVYEELQERGLIAQVTNEEEIRKMVNEGKAIFYIGFDPTADSLHVGHFMALCLMKRLQAA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           G+KPI+L+GGGT +IGDPS R + R+MM ++ I  N    K   S FI +  GK  ALM+
Sbjct: 62  GNKPIALVGGGTGMIGDPSGRSDMRQMMTTEMIDHNCACFKKQMSRFIDFSEGK--ALMV 119

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  + +++ LRE+G  FSVN ML      +RL   Q LSF EF+YM++Q YDF  
Sbjct: 120 NNADWLRDMNFMEFLREVGPHFSVNEMLRARCYVNRLS--QGLSFFEFSYMLMQGYDFYR 177

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L ++Y C ++ GG DQW N++ G +L  +       A+T  LLT   G KMGKT SGA+W
Sbjct: 178 LYEDYGCNMEFGGDDQWSNMLAGTELIRKKLGKDAHAMTITLLTNKEGKKMGKTASGAVW 237

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           L+   TSPY+F+QYWRN+DDADV    + LT +PM EI +M   +G E+N+AK+I+A  +
Sbjct: 238 LDAAKTSPYDFYQYWRNVDDADVGKCLRLLTFIPMEEIKKMDAWEGAELNKAKEILAYHL 297

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
           T +VHG EEA+KA  AA   F    +S + P   + K E   G+ +L L+V +G A S  
Sbjct: 298 TELVHGAEEAKKAEEAAKSLFAGGGNSANTPKCVLKKAEYPEGIDILNLLVVSGLAPSKG 357

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           EARR+++   +      I++   Q+ L + ++     L  GKK+ +   L
Sbjct: 358 EARRNVQQGGVSFAGEKITDIGRQLSLSELENEP--LLQKGKKSFMKIVL 405


>gi|320011551|gb|ADW06401.1| tyrosyl-tRNA synthetase [Streptomyces flavogriseus ATCC 33331]
          Length = 422

 Score =  483 bits (1243), Expect = e-134,   Method: Composition-based stats.
 Identities = 141/421 (33%), Positives = 225/421 (53%), Gaps = 11/421 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +D +  L  RG   Q ++   L    + G VT Y G+D TA+SLH GHL Q++ +  LQ 
Sbjct: 2   TDIVDELKWRGLFAQSTDEDALRKALADGPVTFYCGFDPTAASLHVGHLVQVLTMRRLQL 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            G KP++L+GG T  IGDP      R +   + I   +++++G    F+ +  G   A M
Sbjct: 62  AGLKPLALVGGATGQIGDPRP-TAERTLNDPETIAAWVQRLRGQIEPFLTF-EGPNAATM 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  W   +  I+ LR+IG  F VN+ML+ +SV  RL+ ++ +S+ EF+Y +LQ  DF+
Sbjct: 120 VNNLDWTAGLSAIEFLRDIGKHFRVNKMLTKDSVARRLESQEGISYTEFSYQLLQGMDFL 179

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASGTKMGKTLSGA 244
           EL + + C LQ GGSDQWGN+  GIDL  RL+    + AL +PL+  A GTK GK+ SGA
Sbjct: 180 ELYRRHGCTLQQGGSDQWGNLTAGIDLIHRLEPGAAVHALATPLMVKADGTKFGKSESGA 239

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPM--SEIDRMAKLQGKEINEAKKII 302
           +WL+ EMT+PY F+Q+W N+DD D+ ++ + L+       E       +  +   A++ +
Sbjct: 240 VWLDPEMTTPYAFYQFWLNVDDRDISTYMRILSFRSREELEELEKLTEERPQARSAQRSL 299

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQ------HMPTISISKDEVSRGMGLLTLI 356
           A E+TT+VHG E+      A+   F      +            +    V+    ++ L+
Sbjct: 300 AEELTTLVHGGEQCAAVIAASKALFGQGELGELDEATLSAALSEVPHARVTELGPVVDLL 359

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V+ G + S + ARR +K     +NN+ +++ +      +      + L  GKKN     +
Sbjct: 360 VEVGLSASKSAARRTVKEGGAYVNNAKVTDGESAPSADELLHGRWLVLRRGKKNLAAVEV 419

Query: 417 C 417
            
Sbjct: 420 T 420


>gi|302561395|ref|ZP_07313737.1| tyrosyl-tRNA synthetase [Streptomyces griseoflavus Tu4000]
 gi|302479013|gb|EFL42106.1| tyrosyl-tRNA synthetase [Streptomyces griseoflavus Tu4000]
          Length = 422

 Score =  483 bits (1243), Expect = e-134,   Method: Composition-based stats.
 Identities = 142/421 (33%), Positives = 226/421 (53%), Gaps = 11/421 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +D +  L  RG   Q ++   L  + + G VT Y G+D TA SLH GHL Q++ L  LQ+
Sbjct: 2   TDIVDELKWRGLFAQSTDEDALRKVLADGPVTFYCGFDPTAPSLHVGHLVQVLTLRRLQQ 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+P++L+GG T  IGDP      R +   + +   +E+++G    F+ +  G+  A M
Sbjct: 62  AGHRPLALVGGATGQIGDPRP-TAERTLNAPETVAGWVERLRGQIEPFLTF-EGENAATM 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  W  ++  I+ LR+IG  F VN+ML+ +SV  RL+  + +S+ EF+Y +LQA DF+
Sbjct: 120 VNNLDWTQNLSAIEFLRDIGKHFRVNKMLTKDSVARRLESSEGISYTEFSYQLLQAMDFL 179

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASGTKMGKTLSGA 244
           +L + + C LQ GGSDQWGN+  G+DL  RL+    + A  +PL+T A GTK GKT  GA
Sbjct: 180 QLYRRHGCVLQQGGSDQWGNLTAGLDLIHRLEPDASVHAYATPLMTKADGTKFGKTEGGA 239

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKII 302
           +WL+ EMT+PY F+Q+W N+DD D+  + + L+    +E++ + K   +      A++ +
Sbjct: 240 VWLDPEMTTPYAFYQFWLNVDDRDISGYMRILSFRSRAELEELEKQTAERPQARAAQRAL 299

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQ------HMPTISISKDEVSRGMGLLTLI 356
           A E+TT+VHG  +      A+   F      +            +    V+    ++ L 
Sbjct: 300 AEELTTLVHGAGQTAAVIAASKALFGQGELGELDDRTLAAALSEVPHVRVTELGPVVDLF 359

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            + G   S + ARR +K     +NN  ++ E      +D      + L  GKKN     +
Sbjct: 360 AEVGLVPSKSAARRTVKEGGAYVNNVKVTAEDAVPATEDLLHGRWLVLRRGKKNLAAVEV 419

Query: 417 C 417
            
Sbjct: 420 T 420


>gi|294811867|ref|ZP_06770510.1| Tyrosyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|294324466|gb|EFG06109.1| Tyrosyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
          Length = 455

 Score =  483 bits (1243), Expect = e-134,   Method: Composition-based stats.
 Identities = 146/422 (34%), Positives = 226/422 (53%), Gaps = 11/422 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +D +  L  RG I Q ++   L    + G VT Y G+D TA SLH G+L Q++ +  +Q 
Sbjct: 29  TDIVDELQWRGLIAQSTDEDALRKAFADGPVTFYCGFDPTAPSLHLGNLVQILTMRRIQL 88

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            G++P+ L+GG T +IGDP   +  R +   + + E + +++     F+ +  G   A M
Sbjct: 89  AGNRPLGLVGGATGLIGDPKP-NAERTLNAPETVAEWVGRLRAQIERFLDF-EGPYAARM 146

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  W   +  ID LR++G +F VN+M++ E+V  RL  +  +S+ EF+Y ILQ  D++
Sbjct: 147 VNNLDWTSGLSAIDFLRDVGKYFRVNKMIAKEAVARRLNSDAGISYTEFSYQILQGMDYL 206

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK-LFALTSPLLTTASGTKMGKTLSGA 244
           EL + + C LQ GGSDQWGN+  G DL  R++    + AL +PL+T A GTK GKT SG 
Sbjct: 207 ELYRRHGCTLQTGGSDQWGNLTAGTDLIHRVEPEAGVHALATPLITKADGTKFGKTESGT 266

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKII 302
           +WL+ E TSPY F+Q+W N DD DV  F +  +    +EI+ + +   +      A++ +
Sbjct: 267 VWLDAERTSPYAFYQFWLNADDRDVAKFLRIFSFRSRAEIEELERQTEERPQARAAQRAL 326

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQ-HMPTI-----SISKDEVSRGMGLLTLI 356
           A E+TT+VHG E+   A  AA   F      +   PT+      + +  V     ++ L 
Sbjct: 327 AQELTTLVHGAEQCAAAEYAAKALFGQGELGELDEPTLRAALGELPRASVEELAPVVDLF 386

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            +AG A S + ARR +K     +NN  ++ E       D      + L  GKKN     +
Sbjct: 387 AEAGLAASKSAARRTVKEGGAYVNNVKVTTEDAVPSPGDLLHGRWLVLRRGKKNLAAIEV 446

Query: 417 CG 418
            G
Sbjct: 447 TG 448


>gi|305681987|ref|ZP_07404791.1| tyrosine--tRNA ligase [Corynebacterium matruchotii ATCC 14266]
 gi|305658460|gb|EFM47963.1| tyrosine--tRNA ligase [Corynebacterium matruchotii ATCC 14266]
          Length = 418

 Score =  483 bits (1243), Expect = e-134,   Method: Composition-based stats.
 Identities = 155/421 (36%), Positives = 232/421 (55%), Gaps = 16/421 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG I+Q ++  EL   C +  +T Y G+D T +SLHAGHL  L++L   Q  
Sbjct: 2   NIVDELLWRGLINQATDVDELRAAC-EQPITLYCGFDPTGASLHAGHLVPLIMLKRFQNA 60

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+ ++L GG T +IGDP    E R M+  +EI  NI  I+    SFI Y  GK  A+M+
Sbjct: 61  GHRVLTLAGGATGMIGDPRDVGE-RSMLSEEEIAHNIAAIQDQIRSFIDYTDGK--AIMV 117

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL     ID LR++G  FS+N ML  E+V+ RL  +  +S+ EF+YM+LQ+YD+V 
Sbjct: 118 NNADWLGKFSLIDYLRDLGKNFSLNTMLDRETVKRRLGSD-GISYTEFSYMLLQSYDYVH 176

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA-I 245
           L + YDC LQ+GG DQWGNI+ G+DL  R+   K+  LT PL+T A G K GK+  G  +
Sbjct: 177 LNREYDCVLQIGGGDQWGNIVSGVDLNRRMNQTKVHGLTVPLVTDAQGQKFGKSTGGGKL 236

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKKIIA 303
           WL+ E+TSPY+++QY+ N  D+ V+ + +  T L  +EI     A  +   + EA++ +A
Sbjct: 237 WLDPELTSPYSWYQYFLNAGDSVVIDYLRWFTFLSQAEIAEYEVAVQERPHLREAQRRLA 296

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQ--------HMPTISISKDEVSRGMGLLTL 355
            E+TT+VHG    E    AA   F  +  ++         +   ++++        ++ L
Sbjct: 297 QEMTTLVHGSAATEAVELAAQALFGRAELTELDEATLRGALQETTVAEIAPQDPRTIVDL 356

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +V +G A S   ARR +      +NN  IS+E  +    D      + L  GKK      
Sbjct: 357 LVASGLAASKGAARRTINEGGAYVNNQRISSEDWEPTADDLLYGTWLVLRRGKKTFAGAK 416

Query: 416 L 416
           +
Sbjct: 417 I 417


>gi|326387950|ref|ZP_08209556.1| tyrosyl-tRNA synthetase [Novosphingobium nitrogenifigens DSM 19370]
 gi|326207996|gb|EGD58807.1| tyrosyl-tRNA synthetase [Novosphingobium nitrogenifigens DSM 19370]
          Length = 409

 Score =  483 bits (1243), Expect = e-134,   Method: Composition-based stats.
 Identities = 208/417 (49%), Positives = 279/417 (66%), Gaps = 8/417 (1%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  +KSD L +L+ERG IHQ+++   LD L  +G+V AY GYD TA SLH G+L  +MLL
Sbjct: 1   MSEYKSDLLRLLAERGHIHQLTDAEGLDKLACEGIVVAYNGYDATAPSLHIGNLASVMLL 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             LQ+ GHKPI+LMGGGT+ +GDPS +DESR+++    I  NI  I  +F   + +    
Sbjct: 61  RRLQQAGHKPIALMGGGTTKVGDPSGKDESRKLLTQDAIASNIAGISQVFHRLLDFSDSP 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           T A+M+NN+ WL ++ YIDLLR +G  F+VNRML+F+SV+ RL+REQ L+FLEFNYMILQ
Sbjct: 121 TGAVMVNNDEWLSTLGYIDLLRTVGPHFTVNRMLTFDSVKLRLEREQPLTFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDF ELA  + CRLQ+GGSDQWGNI+ GI+L  R+   +LF LT+PLLTTA G KMGK+
Sbjct: 181 AYDFRELALRHGCRLQLGGSDQWGNIVNGIELTRRMNGIELFGLTTPLLTTADGAKMGKS 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           ++GA+WLN+EM   Y+FWQYWRN+DD DVV F K  T LP+ EI R+  LQG EIN AK 
Sbjct: 241 VNGAVWLNEEMLPSYDFWQYWRNVDDRDVVRFLKLFTDLPLDEIARLEALQGSEINAAKV 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           ++A E+T +V G E A  A T A   F      Q +PT  +  D    G+G++  ++  G
Sbjct: 301 VLANEVTRLVRGEEAARAAETTAAATFAGGGLGQDLPTFEVGPD----GIGIIDALIGLG 356

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           FA S  EA+R +     +++ + I++E   I      ++G  KLS GKK H I  + 
Sbjct: 357 FAASRGEAKRLIAGGGARLDGTAITDEAYHIT----LASGEAKLSSGKKKHGILRIA 409


>gi|260662606|ref|ZP_05863501.1| tyrosyl-tRNA synthetase [Lactobacillus fermentum 28-3-CHN]
 gi|260553297|gb|EEX26240.1| tyrosyl-tRNA synthetase [Lactobacillus fermentum 28-3-CHN]
          Length = 417

 Score =  483 bits (1243), Expect = e-134,   Method: Composition-based stats.
 Identities = 143/420 (34%), Positives = 218/420 (51%), Gaps = 16/420 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG ++Q ++   L  L  +  +  Y G D +  SLH GHL   M+L   Q  
Sbjct: 2   NIIDELKWRGALNQATDEEGLRELTEEKKIALYCGTDPSGDSLHIGHLIPFMMLKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP+ L+GGGT  IGDPS R   R +    ++++N++ +            G  +  ++
Sbjct: 62  GHKPVILIGGGTGAIGDPSGRKTERDLETRSKLEQNVQSLTKQMIRLF----GTENFTIV 117

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL     ID LR+ G  F++N ML+ E V SRL     +SF EF Y ILQA DF+ 
Sbjct: 118 NNYDWLSKFTMIDFLRDYGKLFNLNTMLNKEVVASRLDA--GISFTEFTYQILQAIDFLH 175

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKLFALTSPLLTTASGTKMGKTLSGA 244
           L ++ D +LQ+GGSDQWGNI  GIDL  +++    K+F +T PL+  A GTK GKT  GA
Sbjct: 176 LYRHNDVQLQIGGSDQWGNITSGIDLIHKVEGSDTKVFGVTIPLMLKADGTKFGKTAGGA 235

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKII 302
           +WL+ E TSPY F+Q+W N DD DVV + K  T L   EI  + +    E    EA++ +
Sbjct: 236 VWLDPEKTSPYEFYQFWLNQDDRDVVKYLKYFTFLSQEEIAGLEEKVQTEPWKREAQRRL 295

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRGMGLLTLI 356
           A E+TT VHG+   ++A   +   F   I       +        S +  +    ++  +
Sbjct: 296 AQEVTTFVHGQAATDQAEKISAILFSGDIQDLTTAEVEQAFAGTPSVEVSAEPANIVDWL 355

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V      S  +AR  +K+ AI++N   +++ +  +          + +  GKKN+ +  +
Sbjct: 356 VDTKIEPSKRQAREDVKNGAIRVNGEKVTDLEATLDPTAKFDGKYVVIRRGKKNYTLAKV 415


>gi|282882790|ref|ZP_06291395.1| tyrosine--tRNA ligase [Peptoniphilus lacrimalis 315-B]
 gi|281297201|gb|EFA89692.1| tyrosine--tRNA ligase [Peptoniphilus lacrimalis 315-B]
          Length = 423

 Score =  483 bits (1243), Expect = e-134,   Method: Composition-based stats.
 Identities = 170/411 (41%), Positives = 262/411 (63%), Gaps = 5/411 (1%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
            +   +L ERGFI  +++   L  +  +  +  YIG+D TA SL  GH  Q+ ++  +QK
Sbjct: 17  KNVFDVLKERGFIDSVTDEENLKDVLEKEKIKFYIGFDATADSLTLGHFLQIRVMQHMQK 76

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH P++L+GGGT+ IGDPS +++ R++M  Q I  N +  K   S F+ +  GK   ++
Sbjct: 77  QGHIPVALLGGGTTSIGDPSGKNDMRKLMDRQTIDHNAKCFKEQISRFVDFSDGKG--MI 134

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           LNN  WL ++ +++ +R IG  FSVNRML+F+  ++R+  E+ L+F EF+YM++Q+YDF+
Sbjct: 135 LNNGDWLLNLNFLEFMRTIGVHFSVNRMLTFDCYKNRM--EKGLTFFEFSYMLMQSYDFL 192

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L +NY  +L++GGSDQW NII G +L  +L+  K+F +T  LL TA+G KMGKT  GAI
Sbjct: 193 HLYRNYGVKLELGGSDQWSNIIGGYELVRKLEEEKVFGMTFKLLITANGVKMGKTEKGAI 252

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
           WL+KE TSPY  +QY RN DD DV+ F K LT L M EI    KL+G+E+N+AK+++A E
Sbjct: 253 WLSKEKTSPYEMFQYLRNTDDRDVIKFLKLLTLLDMDEIKEYEKLEGQELNKAKEVLAYE 312

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           +   VHG +EA+KA  A+   F     ++++P+  ++K+ +  G+G+L ++ + GF+ + 
Sbjct: 313 VVKDVHGEDEAKKALEASKAMFGGQKTAENIPSTLMNKESLQEGIGILNILTEIGFSKTN 372

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +EARR +    I IN+  I++  L I L  F     I L  GKK +   +L
Sbjct: 373 SEARRLINQGGISINDEKITDPALIITLDKFKDD-EIILRKGKKLYHKINL 422


>gi|315652795|ref|ZP_07905769.1| tyrosine--tRNA ligase [Eubacterium saburreum DSM 3986]
 gi|315484997|gb|EFU75405.1| tyrosine--tRNA ligase [Eubacterium saburreum DSM 3986]
          Length = 411

 Score =  482 bits (1242), Expect = e-134,   Method: Composition-based stats.
 Identities = 163/410 (39%), Positives = 241/410 (58%), Gaps = 6/410 (1%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L  RG I Q++N  E+  + + G  T YIG+D TA SLH GH   L L+  LQ  
Sbjct: 5   NCYEELKARGLIAQVTNEEEISKMINNGEATFYIGFDPTADSLHVGHFMALCLMKRLQMA 64

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           G+KPI+L+GGGT +IGDPS R + R+++  ++I  N E  K   S FI++G  K  A M+
Sbjct: 65  GNKPIALVGGGTGMIGDPSGRSDLRKVLTIEDIDHNCECFKKQMSRFIEFGENK--ARMV 122

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  + Y++ +R+IG  FSVN ML  +   +R+     LSFLEFNYMILQ+YDF  
Sbjct: 123 NNADWLRDLNYMEFIRDIGPHFSVNNMLRAKCYENRMAN--GLSFLEFNYMILQSYDFYR 180

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L  +Y C +Q GG DQW N++ G +L  R       A+T  LL  + G KMGKT+ GA+W
Sbjct: 181 LFLDYGCNMQFGGDDQWSNMLGGTELIRRKLGKDAHAMTITLLLNSEGKKMGKTVGGAVW 240

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           L+   T+P+ F+QYWRN+ DADV++  + LT LP+ +I+ M+  +G ++NEAK+I+A  +
Sbjct: 241 LDPNKTTPFEFYQYWRNLPDADVLTCLRMLTFLPLEQIEEMSLWEGAKLNEAKEILAMHL 300

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISI-SKDEVSRGMGLLTLIVKAGFATST 365
           T +VHG+EEA+KA  A    F       ++PT  +  +D     + L  ++   G + + 
Sbjct: 301 TELVHGKEEAKKANAAGKSLFTGGGDMSNVPTYILRPEDYRDDTIDLSGVLAVCGLSKTR 360

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +EARR+++   + I   +I + K      DF   G + +  GKKN     
Sbjct: 361 SEARRNIEQGGVSIEGEVIKDIKKTFTKDDFAGEG-LLIKRGKKNFCKVK 409


>gi|254821549|ref|ZP_05226550.1| tyrosyl-tRNA synthetase [Mycobacterium intracellulare ATCC 13950]
          Length = 420

 Score =  482 bits (1242), Expect = e-134,   Method: Composition-based stats.
 Identities = 149/419 (35%), Positives = 223/419 (53%), Gaps = 13/419 (3%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L  RG I Q ++   L     +G +T Y G+D TA SLHAGHL  L+ L   Q+ G
Sbjct: 2   ILDELGWRGLIAQSTDLDALAAEARRGPMTVYAGFDPTAPSLHAGHLVPLLALRRFQRAG 61

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+PI L GG T +IGDP    E R +  +  + E  E+I G    F+ +    T A+++N
Sbjct: 62  HRPIVLAGGATGMIGDPRDVGE-RTLNEADTVAEWTERIGGQLQRFVDFDDSPTGAVVVN 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W   +  I+ LR+IG  FSVN ML  ++VR RL     +S+ EF+YM+LQA D+VEL
Sbjct: 121 NLDWTRPLSAIEFLRDIGKHFSVNVMLDRDTVRRRLD-GDGISYTEFSYMLLQANDYVEL 179

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT-LSGAIW 246
            + Y CRLQ+GGSDQWGNII G+ L  +     + ALT PL+T A GTK GK+   G++W
Sbjct: 180 HRRYGCRLQIGGSDQWGNIIAGVRLVRQQLGASVHALTVPLVTAADGTKFGKSTGGGSLW 239

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIAT 304
           L+  +T+PY ++QY+ N  DADV+ + +  T L   E+  + +   +      A++ +A 
Sbjct: 240 LDPALTTPYAWYQYFFNTADADVIRYLRWFTFLSADELGELEQATAERPQQRAAQRRLAR 299

Query: 305 EITTMVHGREEAEKAATAAMECFDMSI--------HSQHMPTISISKDEVSRGMGLLTLI 356
           E+T +VHG    E    A+   F             S  +   S+++ +     G++ L+
Sbjct: 300 ELTVLVHGEAATEAVEHASRALFGQGELGRLDEATLSAALRETSVAELKPGGPDGIVDLL 359

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           V +G + S   ARR +    + +NN  I +E+   +  DF     + L  GK+      
Sbjct: 360 VASGLSESRKAARRTIGEGGVSVNNVRIESEEWAPQPADFLHGRWLVLRRGKRTVAGVE 418


>gi|325265775|ref|ZP_08132462.1| tyrosine--tRNA ligase [Kingella denitrificans ATCC 33394]
 gi|324982758|gb|EGC18383.1| tyrosine--tRNA ligase [Kingella denitrificans ATCC 33394]
          Length = 432

 Score =  482 bits (1242), Expect = e-134,   Method: Composition-based stats.
 Identities = 157/428 (36%), Positives = 232/428 (54%), Gaps = 23/428 (5%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L  RG I Q ++ +EL  L  Q  +T Y G+D TA SLH GHL  +++L   Q  G
Sbjct: 4   LLQDLQARGLIAQSTDIQELSQLLDQERITLYCGFDPTADSLHIGHLLPVLVLRRFQNAG 63

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H P++L+GG T +IGDPSF+   R +   + +   +E I+     F+K+  G+  A+M N
Sbjct: 64  HTPVALVGGATGMIGDPSFKAAERSLNTPETVAGWVESIRNQLKPFLKF-DGENPAIMEN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDFVE 186
           N  W  S+  +D LR+IG  FSVN ML+ ESV+ R++RE Q +SF EF+Y +LQ YDF E
Sbjct: 123 NANWFGSMNCLDFLRDIGKHFSVNAMLAKESVKQRIEREDQGISFTEFSYALLQGYDFAE 182

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L K ++ +L++GGSDQWGNI  G +   RL    +  +T PL+T + GTK GKT  GA+W
Sbjct: 183 LNKRHNVQLEIGGSDQWGNITWGTETTRRLNGKTVHGMTLPLVTKSDGTKFGKTEGGAVW 242

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMS---EIDRMAKLQGKEINEAKKIIA 303
           L+ + TSPY F+Q+W  + DADV  F K  T L +    +I+   K  GK+  EA++I+A
Sbjct: 243 LDAKKTSPYQFYQFWLKVADADVYKFLKYFTFLSIEQIVQIEADDKASGKKP-EAQRILA 301

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTLIV 357
            E+T ++HG    E A       F     S        +    +    VS    ++ ++V
Sbjct: 302 EEMTRLIHGEAALEAAQRITHSLFSGDESSLTEQDYAQLALDGLPCITVSGSPNVVEVLV 361

Query: 358 KAGFATSTNEARRHLKSNAIKINNS-IIS----------NEKLQIKLQDFDSTGNIKLSF 406
           KAG A S  EAR  ++S A+ +N    +           ++K  +            +  
Sbjct: 362 KAGLAQSNKEARGFVQSGAVLLNGEAAVENNPDFAPEKPDDKYALTDAHKRFGKYTIIKR 421

Query: 407 GKKNHIIC 414
           GK+NH + 
Sbjct: 422 GKRNHALL 429


>gi|304386058|ref|ZP_07368399.1| tyrosine--tRNA ligase [Pediococcus acidilactici DSM 20284]
 gi|304327981|gb|EFL95206.1| tyrosine--tRNA ligase [Pediococcus acidilactici DSM 20284]
          Length = 417

 Score =  482 bits (1242), Expect = e-134,   Method: Composition-based stats.
 Identities = 148/424 (34%), Positives = 223/424 (52%), Gaps = 23/424 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG I+Q ++   L  L  +  +  Y G D T  S+H GHL   M+L   Q+ 
Sbjct: 2   NIIDELDWRGAINQQTDEEGLKKLTEEKSIGLYAGIDPTGDSMHIGHLIPFMVLKRFQQA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP+ L+GGGT  IGDPS +   R +   +++  N E +K     F     G  +  ++
Sbjct: 62  GHKPVILIGGGTGSIGDPSGKKSERVLQSMEQVHHNEEALKKQLVKFF----GTDNFRIV 117

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  +  +D LR+ G  F+VN ML+ + V SRL  E  +SF EF Y ILQ+ DF+ 
Sbjct: 118 NNYDWLSKMSLLDFLRDYGKLFNVNTMLAKDIVASRL--EVGISFTEFTYQILQSVDFLH 175

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKLFALTSPLLTTASGTKMGKTLSGA 244
           L K+ D +LQ+GG DQWGNI  G DL  R++    K++ LT PLL  A GTK GK+  G 
Sbjct: 176 LYKHEDVQLQIGGGDQWGNITAGTDLIHRMEGQDAKVYGLTIPLLLKADGTKFGKSEGGN 235

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKII 302
           +WL+ E T+PY F+Q+W N DD DVV F K  T L   EI+R+A+      E  EA++ +
Sbjct: 236 VWLDPEKTTPYEFYQFWLNQDDRDVVKFLKYFTFLSHEEIERLAETVKTAPEKREAQRRL 295

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGL 352
           A E+T  VHG+   E+A   +   F   +            ++MP++ +   + +  + L
Sbjct: 296 AEEVTEFVHGKAAVEEAQHISAALFSGDVKDLTASEIEQGFKNMPSVEVENKKENIVLWL 355

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           +          S  +AR  +K+ AI+IN   I++   +I          + +  GKK + 
Sbjct: 356 VD---TTKIEPSRRQAREDIKNGAIRINGEKITDVDAEIDPTSHFDGKFVIVRRGKKKYF 412

Query: 413 ICHL 416
           +  +
Sbjct: 413 LARV 416


>gi|262202730|ref|YP_003273938.1| tyrosyl-tRNA synthetase [Gordonia bronchialis DSM 43247]
 gi|262086077|gb|ACY22045.1| tyrosyl-tRNA synthetase [Gordonia bronchialis DSM 43247]
          Length = 437

 Score =  482 bits (1242), Expect = e-134,   Method: Composition-based stats.
 Identities = 139/422 (32%), Positives = 219/422 (51%), Gaps = 14/422 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D +  L  RG I Q ++   L    + G  T Y G+D TA+SLHAGHL  L+ L   Q  
Sbjct: 18  DIVDELQWRGLIAQSTDLDALRARLAGGPTTLYAGFDPTAASLHAGHLVPLLTLRRFQLA 77

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI L GG T +IGDP    E R M  +  + +   +I      F+      T A+++
Sbjct: 78  GHRPIVLAGGATGLIGDPRDVGE-RTMNSADTVADWAARIDAQLRRFVTIDDSPTGAVLV 136

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   +  I+ LR++G  FS+N +L  + VR RL+ +  +S+ EF+Y++LQ++DF++
Sbjct: 137 NNMEWTRELTVIEFLRDLGKHFSMNVLLGRDLVRRRLETD-GISYTEFSYVLLQSHDFLQ 195

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT-LSGAI 245
           L + YDC LQ+GGSDQWGNI+ G+DL  R++   +   T PL+T++ G K GK+   G++
Sbjct: 196 LHRRYDCALQVGGSDQWGNIVSGVDLTRRVEGATVHGFTVPLVTSSDGKKFGKSTGGGSL 255

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIA 303
           WL+ E+TSPY ++QY+ N  DADVV + K  T L   EID    A  +   + +A+K +A
Sbjct: 256 WLDPELTSPYAWYQYFVNTADADVVRYLKWFTFLGREEIDALERATEETPHLRKAQKALA 315

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISIS--------KDEVSRGMGLLTL 355
            E+TT++HG         A+   F  +     +   +++         +       ++ L
Sbjct: 316 AEMTTLIHGEANTAAVELASQALFGRAEL-DALDEQTLAAAVGETTVAEYTGEPPTIVRL 374

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +V  G + S   ARR +      +NN  I +               + +  GKK+     
Sbjct: 375 LVDTGLSDSNKAARRAVAEGGAYVNNVKIEDPDWTPTDDSLLHGRWLVVRRGKKSFAGAR 434

Query: 416 LC 417
           + 
Sbjct: 435 IT 436


>gi|330467036|ref|YP_004404779.1| tyrosyl-tRNA synthetase [Verrucosispora maris AB-18-032]
 gi|328810007|gb|AEB44179.1| tyrosyl-tRNA synthetase [Verrucosispora maris AB-18-032]
          Length = 435

 Score =  482 bits (1241), Expect = e-134,   Method: Composition-based stats.
 Identities = 145/424 (34%), Positives = 219/424 (51%), Gaps = 14/424 (3%)

Query: 2   PAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
           PA +  F   L  RG I   ++P EL  L        Y+G+D TA SLH GHL Q+    
Sbjct: 10  PAGRDSFTDDLRWRGLIQDSTDPDELRALLDGPAAVFYVGFDPTAPSLHVGHLMQVATAR 69

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKT 121
            LQ  GH+P+ L+GG T  IGDP      R +   + +   +++I+   + F+ Y TG  
Sbjct: 70  RLQLAGHRPLLLVGGATGQIGDPK-ESAERTLNPPEVVAGWVQRIRDQLAPFVSY-TGDN 127

Query: 122 DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA 181
            AL++NN  W   +  ++ LR++G  F VN+ML+ E VR+RL+    +SF EF+Y +LQA
Sbjct: 128 AALLVNNLEWTGEMSVVEFLRDVGKHFPVNKMLAREVVRARLES--GISFTEFSYQLLQA 185

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            DF EL + + C+LQ GGSDQWGNI  G+D   R     + A T+PL+T + G+K GKT 
Sbjct: 186 NDFFELHRRHGCQLQFGGSDQWGNITAGVDYVRRRGAGPVQAFTTPLVTKSDGSKFGKTE 245

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAK 299
            GAIWL+ EMTSPY F+Q+W N+DD DV  + +  +     E++ + K   +      A+
Sbjct: 246 GGAIWLDPEMTSPYAFYQFWINVDDRDVGRYLRYFSFRSREELEALEKETAERPASRAAQ 305

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGM-------GL 352
           + +A E+TT+VHG  E  +   A+   F     +  +   ++       G+         
Sbjct: 306 RALAEELTTLVHGEREMAQVVAASQALFGRGSLA-DLSAATLRAALTEAGLVRLDKLPEA 364

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
             L+ ++G   S  EARR +      +NN  ++     I   D      + L  GK++  
Sbjct: 365 AALLKESGLVPSMKEARRVIAEGGAYVNNVRVTEADAVIGADDLLHGRYLVLRRGKRSFA 424

Query: 413 ICHL 416
              L
Sbjct: 425 GVEL 428


>gi|332881510|ref|ZP_08449159.1| tyrosine--tRNA ligase [Capnocytophaga sp. oral taxon 329 str.
           F0087]
 gi|332680508|gb|EGJ53456.1| tyrosine--tRNA ligase [Capnocytophaga sp. oral taxon 329 str.
           F0087]
          Length = 430

 Score =  482 bits (1241), Expect = e-134,   Method: Composition-based stats.
 Identities = 147/428 (34%), Positives = 226/428 (52%), Gaps = 22/428 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG IH +    E   L  +  VTAY+G D TA SLH GHL  +M+L   Q+ 
Sbjct: 2   NFVEELKWRGMIHTMMPGTE--DLLEKEQVTAYLGIDPTADSLHIGHLCGVMMLKHFQRC 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG-TGKTDALM 125
           GHKP++L+GG T +IGDPS + + R ++  + ++ N+  IK   + F+ +       A +
Sbjct: 60  GHKPLALIGGATGMIGDPSGKSQERNLLDEETLRHNVACIKQQLARFLDFDSDAPNHAEL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQAYD 183
           +NN  W+    ++D  RE+G   +VN M++ +SV+ RL  E    LSF EF Y +LQ YD
Sbjct: 120 VNNYDWMKDFTFLDFAREVGKHITVNYMMAKDSVQKRLNGEARDGLSFTEFTYQLLQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ L ++  CRLQ+GGSDQWGNI  G +L  R    ++FAL  PL+T A GTK GKT  G
Sbjct: 180 FLYLYEHKGCRLQLGGSDQWGNITTGAELIRRTNGGEVFALVCPLVTKADGTKFGKTEKG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKI 301
            IWLN++ TSPY F+Q+W N+ D D   + +  TTL   EID +     ++      +K 
Sbjct: 240 NIWLNRDYTSPYAFYQFWLNVADDDAKRYIRIFTTLDKEEIDGLIAQHDEDPGQRILQKR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQ--------------HMPTISISKDEVS 347
           +A EIT MVH  E+   A  A+   F  +                   +P   +S++ +S
Sbjct: 300 LAKEITIMVHSEEDYNMAVEASNILFGKATKESLTKLDEQTLLDVFAGVPQFEVSREVLS 359

Query: 348 RGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+  + L  +      S  E R+ ++   + +N   ++     +   D  +   + +  
Sbjct: 360 AGIKAVDLTAEMTQCFPSKGEMRKMVQGGGVSLNKEKLTAFDRIVTADDLLNGKYLLVQR 419

Query: 407 GKKNHIIC 414
           GKKN+ + 
Sbjct: 420 GKKNYFLL 427


>gi|227536143|ref|ZP_03966192.1| tyrosine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33300]
 gi|227244040|gb|EEI94055.1| tyrosine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33300]
          Length = 427

 Score =  482 bits (1241), Expect = e-134,   Method: Composition-based stats.
 Identities = 146/425 (34%), Positives = 226/425 (53%), Gaps = 19/425 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG +  I    E   L ++  V+ YIG+D T  SLH GHLTQ+M L   Q  
Sbjct: 2   NFVEELRWRGMLQDIMPGTE--ELLNKEKVSGYIGFDPTGDSLHVGHLTQIMTLIHFQNA 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP++L+GG T +IGDPSF+   R ++  + +  N+  +K   S F+ +G G+ DA M+
Sbjct: 60  GHKPVALVGGATGMIGDPSFKSAERNLLDEETLNHNVASLKHQLSKFLTFGEGELDAKMV 119

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W    K++D +R+IG   +VN M++ +SV+ RL+ E  LSF EF+Y ++Q YDF  
Sbjct: 120 NNYDWFKDFKFLDFIRDIGKLITVNYMMAKDSVKKRLEGENGLSFTEFSYQLIQGYDFYY 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L K+++C++QMGGSDQWGNI+ G +   R      FALT+ L+  + G K GKT SGA+W
Sbjct: 180 LWKHHNCKIQMGGSDQWGNIVTGTEFIRRQDQGTAFALTTQLIKKSDGQKFGKTESGAVW 239

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIAT 304
           L+ + T+PY ++Q+W N  D D  ++ +  T  P  EID +             +K +A 
Sbjct: 240 LDAKKTTPYKYYQFWLNATDDDAKNWIRIFTLKPKEEIDAIIAEHDAAPHTRTVQKALAK 299

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDEVSRGM 350
           +IT   H  ++ E A   +   F                      +P  +ISK E++ G+
Sbjct: 300 DITIRTHSEKDYETALKTSEFLFGNGSLDFLGDLEHEAVLDVFDGVPQFTISKSELAEGI 359

Query: 351 GLLTLI-VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
            +L L+  K     S  EAR+  +   + +N   +S        ++  +   I    GKK
Sbjct: 360 NILDLLATKTQIFPSKGEARKMTEGGGVSVNKEKVSGTDATFTTENLINNKYIIAQRGKK 419

Query: 410 NHIIC 414
           N+ + 
Sbjct: 420 NYYLI 424


>gi|299782728|gb|ADJ40726.1| Tyrosyl-tRNA synthetase (Tyrosine--tRNA ligase) (TyrRS)
           [Lactobacillus fermentum CECT 5716]
          Length = 417

 Score =  482 bits (1240), Expect = e-134,   Method: Composition-based stats.
 Identities = 143/420 (34%), Positives = 219/420 (52%), Gaps = 16/420 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG ++Q ++   L  L  +  +  Y G D +  SLH GHL   M+L   Q  
Sbjct: 2   NIIDELRWRGALNQATDEEGLRELTEEKKIALYCGTDPSGDSLHIGHLIPFMMLKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP+ L+GGGT  IGDPS R   R +    ++++N++ +            G  +  ++
Sbjct: 62  GHKPVILIGGGTGAIGDPSGRKTERDLETMSKLEQNVQSLTKQMIRLF----GTENFTIV 117

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL     ID LR+ G  F++N ML+ E V SRL     +SF EF Y ILQA DF+ 
Sbjct: 118 NNYDWLSKFTMIDFLRDYGKLFNLNTMLNKEVVASRLDA--GISFTEFTYQILQAIDFLH 175

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKLFALTSPLLTTASGTKMGKTLSGA 244
           L ++ D +LQ+GGSDQWGNI  GIDL  +++    K+F +T PL+  A GTK GKT  GA
Sbjct: 176 LYRHNDVQLQIGGSDQWGNITSGIDLIHKVEGSDTKVFGVTIPLMLKADGTKFGKTAGGA 235

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKII 302
           +WL+ E TSPY F+Q+W N DD DVV + K  T L   EI  + +    E    EA++ +
Sbjct: 236 VWLDPEKTSPYEFYQFWLNQDDRDVVKYLKYFTFLSQEEIAGLEEKVQTEPWKREAQRRL 295

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRGMGLLTLI 356
           A E+TT VHG+   ++A   +   F  +I       +        S +  +    ++  +
Sbjct: 296 AQEVTTFVHGQAATDQAEKISAILFSGNIQDLTTAEVEQAFAGTPSVEVSAEPANIVDWL 355

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V      S  +AR  +K+ AI++N   +++ +  +          + +  GKKN+ +  +
Sbjct: 356 VDTKIEPSKRQAREDVKNGAIRVNGEKVTDLEATLDPTAKFDGKYVVIRRGKKNYTLAKV 415


>gi|270291482|ref|ZP_06197703.1| tyrosyl-tRNA synthetase [Pediococcus acidilactici 7_4]
 gi|270279979|gb|EFA25816.1| tyrosyl-tRNA synthetase [Pediococcus acidilactici 7_4]
          Length = 417

 Score =  482 bits (1240), Expect = e-134,   Method: Composition-based stats.
 Identities = 147/424 (34%), Positives = 223/424 (52%), Gaps = 23/424 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG I+Q ++   L  L  +  +  Y G D T  S+H GHL   M+L   Q+ 
Sbjct: 2   NIIDELDWRGAINQQTDEEGLKKLTEEKSIGLYAGIDPTGDSMHIGHLIPFMVLKRFQQA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP+ L+GGGT  IGDPS +   R +   +++  N + +K     F     G  +  ++
Sbjct: 62  GHKPVILIGGGTGSIGDPSGKKSERVLQSMEQVHHNEDALKKQLVKFF----GTDNFRIV 117

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  +  +D LR+ G  F+VN ML+ + V SRL  E  +SF EF Y ILQ+ DF+ 
Sbjct: 118 NNYDWLSKMSLLDFLRDYGKLFNVNTMLAKDIVASRL--EVGISFTEFTYQILQSVDFLH 175

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKLFALTSPLLTTASGTKMGKTLSGA 244
           L K+ D +LQ+GG DQWGNI  G DL  R++    K++ LT PLL  A GTK GK+  G 
Sbjct: 176 LYKHEDVQLQIGGGDQWGNITAGTDLIHRMEGQDAKVYGLTIPLLLKADGTKFGKSEGGN 235

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKII 302
           +WL+ E T+PY F+Q+W N DD DVV F K  T L   EI+R+A+      E  EA++ +
Sbjct: 236 VWLDPEKTTPYEFYQFWLNQDDRDVVKFLKYFTFLSHEEIERLAETVKTAPEKREAQRRL 295

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGL 352
           A E+T  VHG+   E+A   +   F   +            ++MP++ +   + +  + L
Sbjct: 296 AEEVTEFVHGKAAVEEAQHISAALFSGDVKDLTASEIEQGFKNMPSVEVENKKENIVLWL 355

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           +          S  +AR  +K+ AI+IN   I++   +I          + +  GKK + 
Sbjct: 356 VD---TTKIEPSRRQAREDIKNGAIRINGEKITDVDAEIDPTSHFDGKFVIVRRGKKKYF 412

Query: 413 ICHL 416
           +  +
Sbjct: 413 LARV 416


>gi|103487134|ref|YP_616695.1| tyrosyl-tRNA synthetase [Sphingopyxis alaskensis RB2256]
 gi|98977211|gb|ABF53362.1| tyrosyl-tRNA synthetase [Sphingopyxis alaskensis RB2256]
          Length = 422

 Score =  482 bits (1240), Expect = e-134,   Method: Composition-based stats.
 Identities = 201/414 (48%), Positives = 281/414 (67%), Gaps = 8/414 (1%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  ++SD L +L ERG+IHQ+++   LD L ++ +V  YIG+D TA SLH G L Q+M+L
Sbjct: 15  MTNYQSDLLRLLDERGYIHQMTDAEGLDALAAKQIVPGYIGFDATAPSLHVGSLVQIMML 74

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             LQ+TGHKPI LMGGGT+ IGDP+ RDESR+M+  + I  NI  I  IF  F+ +G G 
Sbjct: 75  RRLQQTGHKPIVLMGGGTTRIGDPTGRDESRKMLSDEVIAANIASIFSIFRQFLVFGDGP 134

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           TDA+M++N+ WL  + YI+LL+E+G  F++NRML+F+SV+ RL+REQ ++FLEFNYMILQ
Sbjct: 135 TDAVMVDNQDWLGKLGYIELLQEVGRHFTINRMLTFDSVKLRLEREQPMTFLEFNYMILQ 194

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
            YDF  L++    RLQMGGSDQWGNI+ G++LG R+    L+ LT+PLLTTA+G KMGKT
Sbjct: 195 GYDFRHLSREMGVRLQMGGSDQWGNIVNGMELGRRMDGADLYGLTTPLLTTAAGAKMGKT 254

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
            +GA+WLN E  S +++WQYWRN DD DV  F K  T LP++EI R+  L+G EINEAKK
Sbjct: 255 AAGAVWLNPEQLSHFDYWQYWRNCDDRDVGKFLKLFTDLPLAEIARLEALEGAEINEAKK 314

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           I+A E T M  G + A  AA  A + F+       +P ++   D    G+G++  + + G
Sbjct: 315 ILANEATAMCRGVDAASTAAETATQTFEKGRIGGDLPHVAAPAD----GIGIVDALRELG 370

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           FA S  EARR L+  A++++ S++ +   +I      + G+I +S G K H + 
Sbjct: 371 FAASNKEARRKLEEGAVRVDGSVVRDPSYRIVP----AGGDIAISLGAKKHGLV 420


>gi|97201475|sp|Q74LL0|SYY_LACJO RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
          Length = 420

 Score =  482 bits (1240), Expect = e-134,   Method: Composition-based stats.
 Identities = 149/423 (35%), Positives = 216/423 (51%), Gaps = 17/423 (4%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQ-GVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           K D L  L  RG I+Q ++   L    ++   +  Y G D T  SLH GHL   M+L   
Sbjct: 3   KFDILEDLKWRGAINQETDEEGLRKYLAEHDDLALYCGTDPTGDSLHIGHLIPFMILKRF 62

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q  G+ P+ L+GGGT  IGDPS R   R +  +++++ N EK+            G  + 
Sbjct: 63  QMAGYHPVILIGGGTGAIGDPSGRKTERTLQTAEQVKHNEEKLTAQMKKLF----GTENF 118

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            + NN  WL  +  +D LR+ G FF VN M++ + V SRL  E  +SF EF+Y ILQA D
Sbjct: 119 EIRNNAEWLGKMNLLDFLRDYGKFFQVNNMINKDVVASRL--ENGISFTEFSYQILQAID 176

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKLFALTSPLLTTASGTKMGKTL 241
           F  L K+   ++Q+GGSDQWGNI  GIDL  +L       F LT PL+  A GTK GK+ 
Sbjct: 177 FYHLNKDNGVQMQIGGSDQWGNITAGIDLIHKLDGSDRPAFGLTIPLMLKADGTKFGKSA 236

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAK 299
            GA+WL+ E TSPY F+Q+W N DD DVV + K  T L   EI+ +A+   KE     A+
Sbjct: 237 GGAVWLDPEKTSPYEFYQFWINQDDRDVVKYLKYFTFLSREEIEDLAEKTEKEPWKRAAQ 296

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRGMGLL 353
           K +A E+T  VHG E  ++A       F  ++ S  +P I        S +       ++
Sbjct: 297 KRLAEEVTKFVHGEEGLKEAQIITEALFSGNVKSLSVPQIEQALKNAPSAEATHEAKNIV 356

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
             +V+     S  +AR  +K+ AI +N     +    I+         + +  GK+ + +
Sbjct: 357 EFLVETKIEPSKRQAREDVKNGAIYVNGERQDDIDFIIEPDSDFDGKYVIIRKGKRKYTL 416

Query: 414 CHL 416
             +
Sbjct: 417 VKI 419


>gi|302387692|ref|YP_003823514.1| tyrosyl-tRNA synthetase [Clostridium saccharolyticum WM1]
 gi|302198320|gb|ADL05891.1| tyrosyl-tRNA synthetase [Clostridium saccharolyticum WM1]
          Length = 407

 Score =  482 bits (1240), Expect = e-134,   Method: Composition-based stats.
 Identities = 171/408 (41%), Positives = 251/408 (61%), Gaps = 7/408 (1%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG I Q++N  E+  + ++G    YIG+D TA SLH GH   L L+  LQ+ G
Sbjct: 3   IYDELKARGLIAQVTNEEEISKMVNEGKAVFYIGFDPTADSLHVGHFMALCLMKRLQEAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           +KPI+L+GGGT ++GDPS R + R++M  + IQ N +  K   S FI +  GK  ALM+N
Sbjct: 63  NKPIALIGGGTGMVGDPSGRSDLRQVMTVETIQHNCDCFKKQMSRFIDFSEGK--ALMVN 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL ++ YID LRE+G  FSVNRML+ E  + R+  E+ LSFLEFNYMI+Q++DF EL
Sbjct: 121 NADWLLNLNYIDFLREVGPHFSVNRMLTAECYKQRM--EKGLSFLEFNYMIMQSFDFYEL 178

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
              Y C +Q GG DQW N++ G +L  R       A+T  LL  + G KMGKT SGA+WL
Sbjct: 179 FNRYGCNMQFGGDDQWSNMLGGTELIRRKLGKDAHAMTITLLLNSEGNKMGKTQSGAVWL 238

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           + E T+P++F+QYWRNI DADV+   + LT LP+ +I+ M   +G ++NEAK+I+A E+T
Sbjct: 239 DPEKTTPFDFFQYWRNIADADVLKCLRMLTFLPIEQINEMDSWEGSQLNEAKEILAYELT 298

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTN 366
            +VHG EEAE+A  +A   F    ++  MPT  + + + + G + +L ++ K+G A + +
Sbjct: 299 NLVHGEEEAERARESARALFTGG-NAADMPTCELEEADFTDGSIDILAILQKSGLAPTRS 357

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           EARR+++   + +    +S+ K           G + +  GKK  +  
Sbjct: 358 EARRNVEQGGVTVEGEAVSDGKAVFTKDQLSGDG-VVVKRGKKKFVRV 404


>gi|325971776|ref|YP_004247967.1| tyrosyl-tRNA synthetase [Spirochaeta sp. Buddy]
 gi|324027014|gb|ADY13773.1| Tyrosyl-tRNA synthetase [Spirochaeta sp. Buddy]
          Length = 418

 Score =  482 bits (1240), Expect = e-134,   Method: Composition-based stats.
 Identities = 174/417 (41%), Positives = 247/417 (59%), Gaps = 11/417 (2%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L  L +RGFI   ++   L  L  +  VT Y+G D T  SLH GH+     +  LQK GH
Sbjct: 5   LQTLMDRGFIKACTDYDALSDLMDKEKVTFYVGADPTGRSLHIGHMVPFFAMHHLQKAGH 64

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY----GTGKTDAL 124
            PI+L+GGGT++IGDPS R E R+M+  +++ EN + IK    + + +      G   A+
Sbjct: 65  NPIALVGGGTAMIGDPSGRTEMRKMLTPEQVTENCKSIKAQLGTVVDFTEHPQEGMGKAI 124

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           MLNN  WL  + YI  LREIG  FSVNRML+FES + RL+R   LSF+EFNY +LQ+YDF
Sbjct: 125 MLNNADWLTDLNYITFLREIGRHFSVNRMLTFESYKQRLER--GLSFIEFNYQLLQSYDF 182

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L + + CRLQ+GG DQWGNI+ GI+L  R+   + + LT  L+T + G KMGK+  GA
Sbjct: 183 YVLNQEHGCRLQIGGDDQWGNIVSGIELIRRMNGAECYGLTFNLITRSDGHKMGKSEKGA 242

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           ++L+ E+ S Y+F+QYWRN++D DV+ F K  T LP+ EI +  K     IN+AK+ +A 
Sbjct: 243 VFLDPELFSAYDFYQYWRNVNDDDVIKFLKLFTFLPLEEIAQYEKAD-VNINDAKERLAY 301

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQH----MPTISISKDEVSRGMGLLTLIVKAG 360
           E T ++HG EEAEKA  AA   F  +   Q     MP+++I+  E+  G+ +L L  +  
Sbjct: 302 EQTKIIHGVEEAEKARIAAKTMFKGANLGQEGRDGMPSLAIAASELENGIPVLDLFSRTD 361

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            A + ++ARR +   A  I  + I + K  I     D  G + L  GKK +    + 
Sbjct: 362 LAATNSDARRLVAGGAAWIGETKIEDPKTLIDKTYLDGFGEMILRAGKKRYFRITIA 418


>gi|291010100|ref|ZP_06568073.1| tyrosyl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338]
          Length = 424

 Score =  482 bits (1240), Expect = e-134,   Method: Composition-based stats.
 Identities = 147/420 (35%), Positives = 225/420 (53%), Gaps = 13/420 (3%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  LS RG I Q ++   L      G +T Y G+D TA SLHAGHL  ++ L   Q+ G
Sbjct: 5   ILDDLSWRGLIAQSTDLDTLRSDLDAGPLTLYAGFDPTAPSLHAGHLIPILTLRRFQQAG 64

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+P+ L GG T +IGDP    E R +  +  + E  E+I+   S+F+ +    T A+M N
Sbjct: 65  HRPVVLAGGATGLIGDPRDVGE-RNLHDADTVVEWTERIRRQLSAFVDFDDTPTGAIMAN 123

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W   +     LR+IG  FSVN ML+ E+VR RL+ +  +S+ EF+YM+LQA D+VEL
Sbjct: 124 NADWTADLPVTAFLRDIGKHFSVNTMLARETVRRRLETD-GISYTEFSYMLLQANDYVEL 182

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT-LSGAIW 246
            + +   LQ+GGSDQWGNII G+DL  +     + ALT PL+T A G K GK+   G +W
Sbjct: 183 HRRHGTSLQLGGSDQWGNIIAGVDLVRKQNGAAVHALTLPLVTDAEGRKFGKSTGGGNVW 242

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIAT 304
           L+  MTSPY ++QY+ N  DADV  + +  T L   EI+ + +   +  ++   ++ +A 
Sbjct: 243 LDPAMTSPYAWYQYFVNAADADVAKYLRLFTFLSREEIEELERTTAEKPQLRAGQRRLAE 302

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQ--------HMPTISISKDEVSRGMGLLTLI 356
           E+TT+VHG ++  +  TA+   F                M  +   + ++S G  ++ L+
Sbjct: 303 ELTTLVHGEQQTRQVVTASQALFGRGELRDLDESTLDAAMAEVPTGEVDLSDGPTIVELL 362

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V+ G       ARR +      +NNS I++E      +D      + +  GK++     +
Sbjct: 363 VETGLVAGRGAARRTVNEGGAYVNNSKIADETWSPSKEDLLHGRWLVVRRGKRHTAGVKV 422


>gi|114569858|ref|YP_756538.1| tyrosyl-tRNA synthetase [Maricaulis maris MCS10]
 gi|114340320|gb|ABI65600.1| tyrosyl-tRNA synthetase [Maricaulis maris MCS10]
          Length = 415

 Score =  482 bits (1240), Expect = e-134,   Method: Composition-based stats.
 Identities = 190/415 (45%), Positives = 267/415 (64%), Gaps = 2/415 (0%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  +KS  +  L ERG+++Q ++   LD     GVVT YIG+D TA+SLH G L Q+M+L
Sbjct: 1   MSDYKSQLVRDLVERGYLNQATDIEGLDQAALDGVVTGYIGFDATATSLHVGSLVQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             +Q+ GHKPI LMGGGT+ IGDPS +D+SR M+  + I  NI+ I   F   ++ G G 
Sbjct: 61  RRIQQAGHKPIILMGGGTTKIGDPSGKDKSRSMLTDEAIDANIDGILQAFRPLVQIGDGP 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           TDA+++NN+ WL    YI+ LR+ G  F++NRM++F+SV+ RL REQ L+FLEFNYM+LQ
Sbjct: 121 TDAVLVNNDEWLSEFGYIEFLRKFGPHFTINRMMTFDSVKLRLDREQPLTFLEFNYMLLQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           A DF+EL + Y C LQ+GG DQWGNII G++L  R+   +++  T+PL+TT+SG KMGKT
Sbjct: 181 AVDFLELNRRYGCTLQLGGGDQWGNIINGVELCRRVDQKEVYGFTTPLITTSSGAKMGKT 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
             GA+WLN +M S Y +WQ+WRN +DADV  F +  T LP++EI R+  L+G EIN+AK 
Sbjct: 241 ADGAVWLNADMRSAYEYWQFWRNTEDADVGRFLRLFTDLPLAEIARLEALEGAEINDAKI 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
            +A E T ++HG E A  A   A + F        +PT+     +    + L++L V A 
Sbjct: 301 RLANEATGLLHGAEAASAAEATARQTFAQGGSGAALPTVEFEGLDSGE-VTLMSLFVAAE 359

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            A S  E RRH+K+ A K+N+ ++++        D    G IKLS GKK H +  
Sbjct: 360 LAASNGEMRRHIKAGAAKVNDQVLTDPFAMASADDVV-DGAIKLSIGKKRHALAK 413


>gi|222151653|ref|YP_002560809.1| tyrosyl-tRNA synthetase [Macrococcus caseolyticus JCSC5402]
 gi|254783616|sp|B9E7E5|SYY_MACCJ RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|222120778|dbj|BAH18113.1| tyrosyl-tRNA synthetase [Macrococcus caseolyticus JCSC5402]
          Length = 417

 Score =  482 bits (1240), Expect = e-134,   Method: Composition-based stats.
 Identities = 142/416 (34%), Positives = 217/416 (52%), Gaps = 10/416 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S  L  L  RG I+Q ++P E++ L ++  V+ Y G D TA SLH GHL   M L   Q 
Sbjct: 3   SALLEDLRWRGLIYQETHPEEMEALLNKESVSVYCGTDPTADSLHIGHLLPFMTLKRFQA 62

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+P+ L+GG T +IGDPS R + R +    ++Q N++ I         +GT +  A+ 
Sbjct: 63  HGHRPVVLIGGATGMIGDPSGRTDERTLQTLAQVQHNVDGISKQMEQLFDFGT-ENGAIR 121

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           ++N+ WL  I  +  LR+ G    VN +L+ +S+ SRL  E  +SF EF Y ILQA DF 
Sbjct: 122 VDNKDWLGKIDLLTFLRDYGKHVGVNYLLNKDSIASRL--ETGISFTEFTYTILQAIDFG 179

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLG-ERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
            L K  + +LQ+GGSDQWGNI  G++L        + + +T PL+  + G K GK+  GA
Sbjct: 180 HLNKTLNVKLQIGGSDQWGNITSGMELMRRMYGEVEAYGMTVPLVVKSDGKKFGKSEGGA 239

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKII 302
           +WL++  T+PY F+Q+W N  D+DV+ F K  T L   EID    +      +  A+K +
Sbjct: 240 VWLDRTKTTPYEFYQFWINTPDSDVIKFLKYFTFLSKEEIDALETSVENEPHLRLAQKRL 299

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG----MGLLTLIVK 358
           A E+T  VH     E+A       F   + +     +  S  +V +       L+ L+++
Sbjct: 300 AEEVTKYVHDESALEEAVNITDALFKGDLKALTADQLRTSFKDVPQAKVTTTNLVELLIE 359

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           AG + S  +AR  + + AI IN   + +   +I   D        +  GKK + + 
Sbjct: 360 AGISPSKRQAREDITNGAISINGEKVQDVAYEIVATDKIEDEFTIIRRGKKKYFMI 415


>gi|268318748|ref|YP_003292404.1| hypothetical protein FI9785_253 [Lactobacillus johnsonii FI9785]
 gi|262397123|emb|CAX66137.1| tyrS [Lactobacillus johnsonii FI9785]
          Length = 420

 Score =  482 bits (1240), Expect = e-134,   Method: Composition-based stats.
 Identities = 151/423 (35%), Positives = 216/423 (51%), Gaps = 17/423 (4%)

Query: 5   KSDFLSILSERGFIHQISNPRELDI-LCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           K D L  L  RG I+Q ++   L   L     +  Y G D T  SLH GHL   M++   
Sbjct: 3   KFDILEDLKWRGAINQETDEEGLRKYLVEHDDLALYCGTDPTGDSLHIGHLIPFMIMKRF 62

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q  G+ P+ L+GGGT  IGDPS R   R +  +++++ N EK+            G  + 
Sbjct: 63  QMAGYHPVILIGGGTGSIGDPSGRKTERVLQTAEQVKHNEEKLTAQMKKLF----GTENF 118

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            + NN  WL  +  ID LR+ G FF VN M++ + V SRL  E  +SF EF Y ILQA D
Sbjct: 119 EIKNNAEWLGKLNLIDFLRDYGKFFQVNNMINKDVVASRL--ENGISFTEFTYQILQAID 176

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTL 241
           F  L K+   +LQ+GGSDQWGNI  GIDL  +L+      F LT PL+  A GTK GK+ 
Sbjct: 177 FYHLNKDNGVQLQIGGSDQWGNITAGIDLIHKLEGADRPAFGLTIPLMLKADGTKFGKSA 236

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAK 299
            GA+WL+ E TSPY F+Q+W N DD DV+ + K  T L   EI+ +AK   KE     A+
Sbjct: 237 GGAVWLDPEKTSPYEFYQFWVNQDDRDVIKYLKYFTFLSREEIEDLAKKTEKEPWKRAAQ 296

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRGMGLL 353
           K +A E+T  VHG E  ++A       F  ++ S  +P I        S +       ++
Sbjct: 297 KKLAEEVTKFVHGEEGLKEAQMITEALFSGNVKSLSVPQIEQALKNAPSAEATHEPKNIV 356

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
             +V+     S  +AR  +K+ AI +N    ++    I+         + +  GK+ + +
Sbjct: 357 EFLVETKIEPSKRQAREDVKNGAIYVNGERQNDIDFIIEPDSDFDGKYVIIRKGKRKYTL 416

Query: 414 CHL 416
             +
Sbjct: 417 VKI 419


>gi|300787884|ref|YP_003768175.1| tyrosyl-tRNA synthetase [Amycolatopsis mediterranei U32]
 gi|299797398|gb|ADJ47773.1| tyrosyl-tRNA synthetase [Amycolatopsis mediterranei U32]
          Length = 426

 Score =  482 bits (1240), Expect = e-134,   Method: Composition-based stats.
 Identities = 154/424 (36%), Positives = 230/424 (54%), Gaps = 15/424 (3%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQ--GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
            L  LS RG I Q ++   L     Q  G VT Y G+D TA SLHAG+L  L++L   Q+
Sbjct: 5   ILDELSWRGLIAQSTDIDALRRELDQDQGPVTLYCGFDPTAPSLHAGNLVPLLMLKRFQR 64

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+PI L GG T +IGDP    E R +     + E   +I+G    F+ +    T A++
Sbjct: 65  AGHRPIVLAGGATGMIGDPRDTGE-RTLNTLDVVAEWAGRIRGQLERFVDFDDSATGAIV 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
            NN  W      ++ LR++G  FS+N ML+ E+V+ RL+    +S+ EF+Y++LQ+ D++
Sbjct: 124 ENNLNWTGQQTALEFLRDVGKHFSINVMLNRETVKRRLE-GDGMSYTEFSYLLLQSQDYL 182

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT-LSGA 244
           +L + Y CRLQ+GGSDQWGN++ G+DL  R     + ALT+PL+T A G K GK+   G 
Sbjct: 183 QLHRQYGCRLQVGGSDQWGNLVGGVDLIRRTDGAAVHALTAPLVTDAEGRKFGKSTGGGN 242

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKII 302
           +WL+ EMTSPY ++QY+ N+ DADVV + +  T L   EI  +A+   Q   +  A+K +
Sbjct: 243 LWLDPEMTSPYAWYQYFVNVGDADVVRYLRMFTFLDQEEIAALAEDTEQRPHLRAAQKRL 302

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQ-HMPTISISKDEVSRG-------MGLLT 354
           A E TT+VHG E+  +   A+   F           T+  +  EV  G         ++ 
Sbjct: 303 AEEFTTLVHGEEQTRQVINASQALFGRGELGDLDERTLDAAMAEVPNGKVDPGAEPTIVD 362

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           L++  G   S   ARR LK     +NN  I++E+ +   +D      + +  GK+N    
Sbjct: 363 LLLAGGLVDSKGAARRTLKEGGAYVNNVKIADEEWKPSREDALHGKWLVVRKGKRNVAGV 422

Query: 415 HLCG 418
            L G
Sbjct: 423 ALGG 426


>gi|327439210|dbj|BAK15575.1| tyrosyl-tRNA synthetase [Solibacillus silvestris StLB046]
          Length = 423

 Score =  481 bits (1239), Expect = e-134,   Method: Composition-based stats.
 Identities = 139/423 (32%), Positives = 228/423 (53%), Gaps = 13/423 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           ++ L  L  RG ++Q ++   ++ L ++  V+ Y+G D TA S+H GH+  L+ L   QK
Sbjct: 3   NELLQDLEWRGLLYQQTDAEGMEKLLNEEKVSLYVGVDPTADSMHIGHIVPLLTLRRFQK 62

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY-GTGKTDAL 124
            GH PI L+GG T  +GDPS R E R++    +I +N++ +K        +       A+
Sbjct: 63  AGHTPILLVGGATGTVGDPSGRSEERQLQTMDQIDKNVQGLKKQMERLFDFSSDAANGAV 122

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           ++NN  W+  +  ID LR+ G   +VN +L+ ++V SRL     +SF EF Y ++Q  DF
Sbjct: 123 LVNNNDWVGPMTLIDFLRDYGKLINVNYILNKDTVASRLDS--GISFTEFAYTLIQGIDF 180

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERL--KTPKLFALTSPLLTTASGTKMGKTLS 242
             L  +++ R+Q+GGSDQWGNI  G+++  +   +  K F +T PL+T A GTK GKT  
Sbjct: 181 NHLYDHHNVRIQVGGSDQWGNITTGLEMIRKTHDENAKAFGITIPLVTKADGTKFGKTAG 240

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKK 300
           GA+WL+   TSPY F+Q+W N  DADVV + K  T L   EI+   ++  +   + +A+K
Sbjct: 241 GAVWLDAAKTSPYEFYQFWINTADADVVKYLKIFTFLSREEIEGLAVSVEEEPHLRKAQK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISI------SKDEVSRGMGLLT 354
            +A E+T ++HG E  E A       F   + +  +  + +      S +       ++ 
Sbjct: 301 ALAEEMTRLIHGEEGLEAAERITKALFSGDLKALSVEEMKVAFSGVPSVEVAKEDKNIVE 360

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           LIV+AG ++S  +AR  + + AI +N   I++ +  I  +D        +  GKK + + 
Sbjct: 361 LIVEAGISSSKRQAREDVTNGAISVNGEKITDLEYVIDAKDRLEDAFAIIRRGKKKYHMV 420

Query: 415 HLC 417
              
Sbjct: 421 KFA 423


>gi|42518261|ref|NP_964191.1| tyrosyl-tRNA synthetase [Lactobacillus johnsonii NCC 533]
 gi|41582545|gb|AAS08157.1| tyrosyl-tRNA synthetase [Lactobacillus johnsonii NCC 533]
          Length = 426

 Score =  481 bits (1239), Expect = e-134,   Method: Composition-based stats.
 Identities = 149/423 (35%), Positives = 216/423 (51%), Gaps = 17/423 (4%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQ-GVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           K D L  L  RG I+Q ++   L    ++   +  Y G D T  SLH GHL   M+L   
Sbjct: 9   KFDILEDLKWRGAINQETDEEGLRKYLAEHDDLALYCGTDPTGDSLHIGHLIPFMILKRF 68

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q  G+ P+ L+GGGT  IGDPS R   R +  +++++ N EK+            G  + 
Sbjct: 69  QMAGYHPVILIGGGTGAIGDPSGRKTERTLQTAEQVKHNEEKLTAQMKKLF----GTENF 124

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            + NN  WL  +  +D LR+ G FF VN M++ + V SRL  E  +SF EF+Y ILQA D
Sbjct: 125 EIRNNAEWLGKMNLLDFLRDYGKFFQVNNMINKDVVASRL--ENGISFTEFSYQILQAID 182

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKLFALTSPLLTTASGTKMGKTL 241
           F  L K+   ++Q+GGSDQWGNI  GIDL  +L       F LT PL+  A GTK GK+ 
Sbjct: 183 FYHLNKDNGVQMQIGGSDQWGNITAGIDLIHKLDGSDRPAFGLTIPLMLKADGTKFGKSA 242

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAK 299
            GA+WL+ E TSPY F+Q+W N DD DVV + K  T L   EI+ +A+   KE     A+
Sbjct: 243 GGAVWLDPEKTSPYEFYQFWINQDDRDVVKYLKYFTFLSREEIEDLAEKTEKEPWKRAAQ 302

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRGMGLL 353
           K +A E+T  VHG E  ++A       F  ++ S  +P I        S +       ++
Sbjct: 303 KRLAEEVTKFVHGEEGLKEAQIITEALFSGNVKSLSVPQIEQALKNAPSAEATHEAKNIV 362

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
             +V+     S  +AR  +K+ AI +N     +    I+         + +  GK+ + +
Sbjct: 363 EFLVETKIEPSKRQAREDVKNGAIYVNGERQDDIDFIIEPDSDFDGKYVIIRKGKRKYTL 422

Query: 414 CHL 416
             +
Sbjct: 423 VKI 425


>gi|323356713|ref|YP_004223109.1| tyrosyl-tRNA synthetase [Microbacterium testaceum StLB037]
 gi|323273084|dbj|BAJ73229.1| tyrosyl-tRNA synthetase [Microbacterium testaceum StLB037]
          Length = 437

 Score =  481 bits (1239), Expect = e-134,   Method: Composition-based stats.
 Identities = 138/411 (33%), Positives = 212/411 (51%), Gaps = 12/411 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L  RG IH  ++  EL  L   G +  Y G+D TA SLH G+L QL+ +  LQ  
Sbjct: 23  NVWDELVYRGLIHVSTDETELRDLLGAGPIVFYCGFDPTAPSLHLGNLVQLLTMRRLQLA 82

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+P+ L+GG T ++GDP      R +   + + E + +++     F+ +  G + A M+
Sbjct: 83  GHRPLGLVGGSTGLVGDPRP-TAERTLNTRETVAEWVARLRAQVERFLSF-EGDSAARMV 140

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   +  ID LREIG  F V  ML  ++V +RL  E  +S+ EF+Y ILQ  D++E
Sbjct: 141 NNLDWTAPLSAIDFLREIGKHFRVGTMLKKDAVSARLNSEAGISYTEFSYQILQGLDYLE 200

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + Y C LQ GGSDQWGN+  G DL  +++   + A+ +PL+T + GTK GK+   AIW
Sbjct: 201 LYRQYGCVLQTGGSDQWGNLTSGTDLVRKVEGASVHAIGTPLITNSDGTKFGKSEGNAIW 260

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIAT 304
           L+ +M SP+  +Q+W N DD DV+   K  T L  +EI+  AKL   E     A+K +A 
Sbjct: 261 LDADMCSPWAMYQFWLNTDDRDVIERLKVFTFLTRAEIEEYAKLVETEPFRRAAQKRLAR 320

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI------SISKDEVSRGMGLLTLIVK 358
           E+ T VHG E  E    A    F           +       +    ++ G  +L  +  
Sbjct: 321 EVVTTVHGAEATEAVIAATEALFGQGDVKALDAAVLRTALEELPHATLAAGSTVLDALTA 380

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
            G + S ++ARR +    + ++   ++++   ++       G   L  GKK
Sbjct: 381 TGLSGSLSDARRAIAQGGVTLDGEKVTSDDAIVEGT--LPGGVSVLRRGKK 429


>gi|293376351|ref|ZP_06622588.1| tyrosine--tRNA ligase [Turicibacter sanguinis PC909]
 gi|325843430|ref|ZP_08167988.1| tyrosine--tRNA ligase [Turicibacter sp. HGF1]
 gi|292645040|gb|EFF63113.1| tyrosine--tRNA ligase [Turicibacter sanguinis PC909]
 gi|325489352|gb|EGC91726.1| tyrosine--tRNA ligase [Turicibacter sp. HGF1]
          Length = 422

 Score =  481 bits (1239), Expect = e-134,   Method: Composition-based stats.
 Identities = 146/422 (34%), Positives = 229/422 (54%), Gaps = 12/422 (2%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
            K++FL  L  RG I+  ++   LD L  +G +T Y G+D TA SLH GHL  +++L   
Sbjct: 1   MKNEFLKDLQWRGLINDCTDFDALDELVEKGNITLYCGFDPTADSLHIGHLLMILILKRF 60

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK-TD 122
           Q  GHKP++L+GG T +IGDPS R   R     + +++    IKG  S F+ +   +   
Sbjct: 61  QLAGHKPLALVGGATGLIGDPSGRSVERPDSNLETVEKWSNSIKGQLSQFLDFNETEANG 120

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
           A ++NN  W  ++  +D LR++G +F+VN +L+ + V SRL  ++ ++F EF+Y ILQ  
Sbjct: 121 AEIVNNYDWTSNVNMLDFLRDVGKYFNVNYILAKDLVCSRL--DKGMTFTEFSYTILQGM 178

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKLFALTSPLLTTASGTKMGKT 240
           DF  L +   C LQ+GGSDQWGNI  G++L  +      K   LT PL+T A GTK GKT
Sbjct: 179 DFKHLYETKKCVLQIGGSDQWGNITSGLELIRKQLGHEEKAVGLTMPLVTKADGTKFGKT 238

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEA 298
             GA+WL+++ TSPY  +Q+  N  D DVV F K  T L   EI+ +     +   +   
Sbjct: 239 AGGAVWLDRKKTSPYELYQFLINTADEDVVKFLKYFTFLTKEEIEAVEAEFKEAPHLRHG 298

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS-----ISKDEVSRGMGLL 353
           +K++A E+ T+VHG E  E+A       F  ++       I      +   E++  + L+
Sbjct: 299 QKVLAREVVTLVHGVEAYEQALKITEALFSGNLAGLTAEEIEVGFKDVPSVELAEDLNLV 358

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
             +V A  A+S  E+R  + +N+I IN   ++N +  +  ++        +  GKK + +
Sbjct: 359 DALVFAKAASSKRESREFINNNSILINGEKVNNLEFIVSKENAIGGKFTVIRRGKKKYFL 418

Query: 414 CH 415
             
Sbjct: 419 IK 420


>gi|322381916|ref|ZP_08055869.1| tyrosyl-tRNA synthetase-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
 gi|321154117|gb|EFX46440.1| tyrosyl-tRNA synthetase-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
          Length = 457

 Score =  481 bits (1239), Expect = e-134,   Method: Composition-based stats.
 Identities = 146/424 (34%), Positives = 221/424 (52%), Gaps = 21/424 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  R  I+Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  
Sbjct: 39  NIIDELEWRDAINQQTDAEGLRKLVEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLF 98

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+P+ L+GG T  IGDPS R   R++   +++Q N+E +         +G G  +  M+
Sbjct: 99  GHRPVILIGGATGTIGDPSGRQTERQLQTLEQVQHNVEALTAQMKKLFGFG-GDNEVKMV 157

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   +  +D LR+ G  FSVN ML+ + V SRL+    +SF EF+Y ILQ+ DF  
Sbjct: 158 NNYDWTHKMNVLDFLRDYGKNFSVNTMLAKDIVASRLES--GISFTEFSYQILQSMDFHH 215

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSGA 244
           L K  D +LQ+GG+DQWGNI  G+DL  + + P  K F LT PL+  A GTK GKT  GA
Sbjct: 216 LFKEEDVQLQIGGADQWGNITSGLDLIRKKEGPDAKAFGLTIPLMLKADGTKFGKTAGGA 275

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKII 302
           IWL+   T+P+ F+Q+W N DD DVV + K  T L    I+ +A+    +    EA+K++
Sbjct: 276 IWLDPAKTTPFEFYQFWVNTDDRDVVKYLKFFTFLTKEVIEELAQKVETDPGKREAQKVL 335

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGL 352
           A E+T  VHG E   ++       F   I            + MPT   SK        +
Sbjct: 336 AAEMTKFVHGEEALAQSGKITEALFSGDIKGLTADEIEQGFKDMPTFHASK----ESKNI 391

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           +  +V+     S  +AR  + + AI +N   +S+   ++ +++      I +  GKKN+ 
Sbjct: 392 VDWLVELRIEPSKRQAREDITNGAISMNGERVSDLNTEVTVENSFDGRFIIIRKGKKNYS 451

Query: 413 ICHL 416
           +  L
Sbjct: 452 LVKL 455


>gi|75411773|sp|Q9EUU8|SYY_MYCFO RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|11830856|emb|CAC18748.1| tyrosyl-tRNA synthetase [Mycobacterium fortuitum]
          Length = 428

 Score =  481 bits (1239), Expect = e-134,   Method: Composition-based stats.
 Identities = 151/426 (35%), Positives = 224/426 (52%), Gaps = 16/426 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
             L  L  RG I Q ++   L    + G +T Y G+D TA SLHAGHL  L+ L   Q+ 
Sbjct: 4   GILDELDWRGLIAQSTDRETLANDLANGPMTVYSGFDPTAPSLHAGHLVPLLTLRRFQRA 63

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI L GG T +IGDP    E R +  +  + +   +I+G    F+++    T A++ 
Sbjct: 64  GHRPIVLAGGATGMIGDPRDTGE-RTLNTADTVADWAGRIRGQLERFVEFDDTPTGAIVE 122

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   +  I+ LR++G +FSVN ML  E+VR RL+    +S+ EF+YM+LQA DFVE
Sbjct: 123 NNLNWTGRLSAIEFLRDLGKYFSVNVMLDRETVRRRLE-GDGISYTEFSYMLLQANDFVE 181

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT-LSGAI 245
           L + Y C LQ+GGSDQWGNI+ G  L  +     + A+T+PL+T + G K GK+   G +
Sbjct: 182 LHQRYGCALQIGGSDQWGNIVAGARLVRQKLGATVHAMTTPLVTDSEGKKFGKSTGGGNL 241

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIA 303
           WL+ EMTSPY ++QY+ N  DADV+ + +  T L   EI     A         A+K +A
Sbjct: 242 WLDPEMTSPYAWYQYFVNTADADVIGYLRWFTFLSADEIAELEDATQNRAHERAAQKRLA 301

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQ-HMPTISISKDEVSRGM----------GL 352
            E+TT+VHG         A+   F  +  +     T+  +  E S G            +
Sbjct: 302 RELTTLVHGEGATTAVELASQALFGRAELADLDESTLGAALREASNGQVAELKPGGPDSI 361

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           + L+V+ G A S   ARR++    + +NN  I +++   +  DF     + L  GK++  
Sbjct: 362 VDLLVETGLAASKGAARRNVAEGGVYVNNIRIESDEWIPQHSDFLHERWLVLRRGKRHIA 421

Query: 413 ICHLCG 418
                G
Sbjct: 422 GVERVG 427


>gi|255326330|ref|ZP_05367414.1| tyrosine--tRNA ligase [Rothia mucilaginosa ATCC 25296]
 gi|255296547|gb|EET75880.1| tyrosine--tRNA ligase [Rothia mucilaginosa ATCC 25296]
          Length = 434

 Score =  481 bits (1239), Expect = e-134,   Method: Composition-based stats.
 Identities = 147/423 (34%), Positives = 227/423 (53%), Gaps = 19/423 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L  RG +H  ++   L+   S+  +T Y GYD TA+SLH GHL QL+++  LQ  
Sbjct: 17  NIWQELKWRGLVHVSTDEAALEKALSEESLTFYTGYDPTAASLHLGHLVQLLVMRRLQLA 76

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP+ L+GG T +IGDP  +   R +   + + E ++ ++     F+ +  G+  A M+
Sbjct: 77  GHKPLGLVGGFTGLIGDPR-QTSERVLNSPEVVAEWVKSLRAQIERFLSF-EGENAARMV 134

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   +  + LLR++G  F V  M+  E V  RL  ++ +S+ EF+Y ILQ  DF+E
Sbjct: 135 NNLDWSGQMSALQLLRDVGKHFRVGTMVKKEIVAKRLNSDEGISYTEFSYQILQGLDFLE 194

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + + C LQ GGSDQWGN+  G +L  +++   + A+ +PL+T + GTK GK+   AIW
Sbjct: 195 LNRRFGCTLQTGGSDQWGNLTSGTELIRKVEGKSVHAIGTPLITNSDGTKFGKSEGNAIW 254

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIAT 304
           LN +M SPY F+Q+W N  DADV+   K  T L  +EI   A+   KE    EA+K +A 
Sbjct: 255 LNPQMCSPYAFYQFWLNTADADVLDRLKVFTFLTRAEIAEFAEKVEKEPFKREAQKTLAY 314

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHS-----------QHMPTISISKDEVSRGMGLL 353
            +T++VHG E  ++A  A+   F     +             +P+  +S+D +     ++
Sbjct: 315 LVTSLVHGTEATDQAVAASEALFGKGDFAALDEATLESVVAELPSAKLSEDRL----DMI 370

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
           +++ + GFA S +EARR LK     +N   +  E   I   D        +  GKKN   
Sbjct: 371 SVLTELGFAKSNSEARRILKEGGASVNGVKVQGEDAAISKDDLLHGRFAMVRRGKKNQGA 430

Query: 414 CHL 416
             L
Sbjct: 431 VEL 433


>gi|330997189|ref|ZP_08321042.1| tyrosine--tRNA ligase [Paraprevotella xylaniphila YIT 11841]
 gi|329570984|gb|EGG52691.1| tyrosine--tRNA ligase [Paraprevotella xylaniphila YIT 11841]
          Length = 430

 Score =  481 bits (1239), Expect = e-134,   Method: Composition-based stats.
 Identities = 148/428 (34%), Positives = 227/428 (53%), Gaps = 22/428 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG IH +    E   L  +  VTAY+G D TA SLH GHL  +M+L   Q+ 
Sbjct: 2   NFVEELKWRGMIHTMMPGTE--DLLEKEQVTAYLGIDPTADSLHIGHLCGVMMLKHFQRC 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG-TGKTDALM 125
           GHKP++L+GG T +IGDPS + + R ++  + ++ N+  IK   + F+ +       A +
Sbjct: 60  GHKPLALIGGATGMIGDPSGKSQERNLLDEETLRHNVACIKQQLARFLDFDSDAPNHAEL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQAYD 183
           +NN  W+   K++D  RE+G   +VN M++ +SV+ RL  E    LSF EF Y +LQ YD
Sbjct: 120 VNNYDWMKDFKFLDFAREVGKHITVNYMMAKDSVQKRLNGEARDGLSFTEFTYQLLQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ L ++  CRLQ+GGSDQWGNI  G +L  R    ++FAL  PL+T A GTK GKT  G
Sbjct: 180 FLYLYEHKGCRLQLGGSDQWGNITTGAELIRRTNGGEVFALVCPLVTKADGTKFGKTEKG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKI 301
            IWLN++ TSPY F+Q+W N+ D D   + +  TTL   EID +     ++      +K 
Sbjct: 240 NIWLNRDYTSPYAFYQFWLNVADDDAKRYIRIFTTLDKEEIDGLIAQHDEDPGQRILQKR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQ--------------HMPTISISKDEVS 347
           +A EIT MVH  E+   A  A+   F  +                   +P   +S++ +S
Sbjct: 300 LAKEITIMVHSEEDYNMAVEASNILFGKATKESLTKLDEQTLLDVFAGVPQFEVSREALS 359

Query: 348 RGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+  + L  +      S  E R+ ++   + +N   ++     +   D  +   + +  
Sbjct: 360 AGVKAVDLTAEMTQCFPSKGEMRKMVQGGGVSLNKEKLTAFDRMVTTDDLLNGKYLLVQR 419

Query: 407 GKKNHIIC 414
           GKKN+ + 
Sbjct: 420 GKKNYFLL 427


>gi|237785437|ref|YP_002906142.1| Tyrosyl-tRNA synthetase [Corynebacterium kroppenstedtii DSM 44385]
 gi|237758349|gb|ACR17599.1| Tyrosyl-tRNA synthetase [Corynebacterium kroppenstedtii DSM 44385]
          Length = 444

 Score =  481 bits (1239), Expect = e-134,   Method: Composition-based stats.
 Identities = 148/432 (34%), Positives = 226/432 (52%), Gaps = 18/432 (4%)

Query: 2   PAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
           P  ++  +  L  RG I+Q ++   L      G++T Y G+D T  SLHAGHL  L++L 
Sbjct: 13  PDARAAVIEDLQWRGLINQSTDLDLLKQAARDGMLTLYTGFDPTGPSLHAGHLVPLLMLK 72

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG---- 117
             Q+ GH+PI L GG T +IGDP    E R M+ +  + E  E I      F+ +     
Sbjct: 73  RFQQAGHRPIVLAGGATGMIGDPREVGE-RAMLAADTVSEWAENISSQLRRFVSFEGDPD 131

Query: 118 -TGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNY 176
            +G   A++ NN TW   +  I+ LR++G  FS+N MLS ++V+ RL+    +S+ EF+Y
Sbjct: 132 FSGNNGAILENNYTWTSQMSAIEYLRDLGKNFSLNTMLSRDTVKRRLE-GDGISYTEFSY 190

Query: 177 MILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTK 236
           M+LQA DFVEL + YDCR+Q+GGSDQWGNI+ G+DL  R+    +  +T PL+T + G K
Sbjct: 191 MLLQANDFVELRRRYDCRVQIGGSDQWGNIVGGVDLNRRVDNEVVHGITVPLVTDSEGKK 250

Query: 237 MGKTLSGA-IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGK 293
            GK+  G  +WL+ EMTSPY+++QY+ N  DADV+ + +  T L   E+        +  
Sbjct: 251 FGKSTGGGKLWLDPEMTSPYSWYQYFLNSADADVIRYLRWFTFLDREELKDLETETQERP 310

Query: 294 EINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQ--------HMPTISISKDE 345
               A+K +A E+TT+VHG E  +    A+   F                +    I++  
Sbjct: 311 HKRAAQKRLAQEMTTLVHGAEATKSVELASQALFGRGELRDLDSSTLKGALSETEIAEFP 370

Query: 346 VSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLS 405
                 ++ L+V++  A S   ARR +K     +NN  +S+     +  D      + L 
Sbjct: 371 QGAEPTIVDLLVESKLAPSKGAARRTVKEGGAYVNNERVSDMDWIPRADDLLHGQWLVLR 430

Query: 406 FGKKNHIICHLC 417
            GKK+       
Sbjct: 431 RGKKSFAGAKFA 442


>gi|240079959|ref|ZP_04724502.1| putative tyrosyl-tRNA synthase [Neisseria gonorrhoeae FA19]
 gi|240117199|ref|ZP_04731261.1| putative tyrosyl-tRNA synthase [Neisseria gonorrhoeae PID1]
 gi|268596100|ref|ZP_06130267.1| tyrosyl-tRNA synthetase [Neisseria gonorrhoeae FA19]
 gi|268602890|ref|ZP_06137057.1| tyrosyl-tRNA synthetase [Neisseria gonorrhoeae PID1]
 gi|268549888|gb|EEZ44907.1| tyrosyl-tRNA synthetase [Neisseria gonorrhoeae FA19]
 gi|268587021|gb|EEZ51697.1| tyrosyl-tRNA synthetase [Neisseria gonorrhoeae PID1]
          Length = 431

 Score =  481 bits (1238), Expect = e-133,   Method: Composition-based stats.
 Identities = 155/427 (36%), Positives = 224/427 (52%), Gaps = 21/427 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            +  L  RG I Q ++   LD L ++  +  Y G+D TA SLH GHL  ++ L   Q+ G
Sbjct: 3   VIQDLQSRGLIAQTTDIEALDALLNEQKIALYCGFDPTADSLHIGHLLPVLALRRFQQAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H PI+L+GG T +IGDPSF+   R +  ++ +   +  I+   + F+ +  G   A+M N
Sbjct: 63  HTPIALVGGATGMIGDPSFKAAERSLNSAETVAGWVGSIRSQLTPFLSF-EGGNAAIMAN 121

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDFVE 186
           N  W  S+  +D LR+IG  FSVN ML+ ESV+ R+ R    +SF EF Y +LQ YDF E
Sbjct: 122 NADWFGSMNCLDFLRDIGKHFSVNAMLNKESVKQRIDRDGAGISFTEFAYSLLQGYDFAE 181

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L K +   L++GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  GA+W
Sbjct: 182 LNKRHGAVLEIGGSDQWGNITAGIDLTRRLNQKQVFGLTLPLVTKSDGTKFGKTEGGAVW 241

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINEAKKIIAT 304
           LN + TSPY F+Q+W  + DADV  F K  T L + EID +           EA++I+A 
Sbjct: 242 LNAKKTSPYQFYQFWLKVADADVYKFLKYFTFLSIEEIDAIEAKDKASGSKPEAQRILAE 301

Query: 305 EITTMVHGREEAEKAATAAMECFDMSI------HSQHMPTISISKDEVSRGMGLLTLIVK 358
           E+T ++HG E    A   +   F            + +    +   EVS G+  +  +VK
Sbjct: 302 EMTRLIHGEEALAAAQRISESLFAEDQSRLTESDFEQLALDGLPAFEVSDGINAVEALVK 361

Query: 359 AGFATSTNEARRHLKSNAIKINNSIIS-----------NEKLQIKLQDFDSTGNIKLSFG 407
            G A S  EAR  + + A+ +N                ++   +  +         L  G
Sbjct: 362 TGLAASNKEARGFVNAKAVLLNGKPAEANNPNHAAERPDDAYLLIGEYKRFGKYTILRRG 421

Query: 408 KKNHIIC 414
           K+NH + 
Sbjct: 422 KRNHALL 428


>gi|116628855|ref|YP_814027.1| tyrosyl-tRNA synthetase [Lactobacillus gasseri ATCC 33323]
 gi|116094437|gb|ABJ59589.1| tyrosyl-tRNA synthetase [Lactobacillus gasseri ATCC 33323]
          Length = 426

 Score =  481 bits (1238), Expect = e-133,   Method: Composition-based stats.
 Identities = 151/423 (35%), Positives = 219/423 (51%), Gaps = 17/423 (4%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQ-GVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           K D L  L  RG I+Q ++   L    ++   +  Y G D T  SLH GHL   M+L   
Sbjct: 9   KFDILEDLKWRGAINQETDEEGLRKYLAEHDDLALYCGTDPTGDSLHIGHLIPFMILKRF 68

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q  G+ P+ L+GGGT  IGDPS R   R +  +++++ N EK+            G  + 
Sbjct: 69  QMAGYHPVILIGGGTGSIGDPSGRKTERVLQTAEQVKHNEEKLTTQMKKLF----GTENF 124

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            + NN  WL  +  ID LR+ G FF VN M++ + V SRL  E  +SF EF+Y ILQA D
Sbjct: 125 EIKNNAEWLGKLNLIDFLRDYGKFFQVNNMINKDVVASRL--ENGISFTEFSYQILQAID 182

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTL 241
           F  L K+   +LQ+GGSDQWGNI  GIDL  +L+      F LT PL+  A GTK GK+ 
Sbjct: 183 FYHLNKDNGVQLQIGGSDQWGNITAGIDLIHKLEGQERPAFGLTIPLMLKADGTKFGKSA 242

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAK 299
            GA+WL+ E TSPY F+Q+W N DD DVV + K  T L   EI+ +A+   KE     A+
Sbjct: 243 GGAVWLDPEKTSPYEFYQFWINQDDRDVVKYLKYFTFLSREEIEDLAEKTEKEPWKRAAQ 302

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRGMGLL 353
           K +A E+T  VHG E  ++A       F  ++ S  +P I        S +       ++
Sbjct: 303 KRLAEEVTKFVHGEEGLKEAQMITEALFSGNVKSLSVPQIEQALKNAPSAEATHEAKNIV 362

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
             +V+     S  +AR  +K+ AI +N    ++    I+  +      + +  GK+ + +
Sbjct: 363 EFLVETKIEPSKRQAREDVKNGAIYVNGERQNDIDFIIEPDNDFDGKYVIIRKGKRKYTL 422

Query: 414 CHL 416
             +
Sbjct: 423 VKI 425


>gi|172040781|ref|YP_001800495.1| hypothetical protein cur_1101 [Corynebacterium urealyticum DSM
           7109]
 gi|171852085|emb|CAQ05061.1| unnamed protein product [Corynebacterium urealyticum DSM 7109]
          Length = 436

 Score =  481 bits (1238), Expect = e-133,   Method: Composition-based stats.
 Identities = 156/431 (36%), Positives = 234/431 (54%), Gaps = 23/431 (5%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L  RG I   ++  EL     +     Y G+D T  SLHAGHL  L+LL   Q 
Sbjct: 9   SNLVDELQWRGLIADSTDLDELREQL-KNPTAVYCGFDPTGDSLHAGHLVPLLLLRRFQL 67

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY--------- 116
            GHK  +L GG T +IGDP    E R M+  +++ EN+E IK    +F+ +         
Sbjct: 68  AGHKAFALAGGATGMIGDPRDVGE-RSMLTEEQVAENVEHIKKQLRAFLLFEGSAELEES 126

Query: 117 GTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNY 176
           G     A ++NN  W+ ++  I  LR++G  FS+N MLS ++V+ RL  +  +S+ EF+Y
Sbjct: 127 GKDLHPATLVNNADWIGNMSVIHFLRDLGKNFSLNTMLSRDTVKRRLAAD-GISYTEFSY 185

Query: 177 MILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTK 236
           M+LQA DFV L + +D  +Q+GGSDQWGNI+ G+DL  R+    +  LT PL+T + G K
Sbjct: 186 MLLQANDFVHLHREHDVCVQVGGSDQWGNIVSGVDLVRRMDGDSVHGLTVPLVTDSEGKK 245

Query: 237 MGKT-LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI 295
            GK+   G +WL+ E+TSPY+++QY+ N  DADVV F +  T L   EIDR+A    +  
Sbjct: 246 FGKSTGGGNLWLDPELTSPYSWYQYFFNTADADVVKFLRMFTFLDREEIDRLAVEVAERP 305

Query: 296 --NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISK-------DEV 346
              EA++++A E+T +VHG +   K   AA   F  +  S H+   +++         E 
Sbjct: 306 FKREAQRVLAQEMTALVHGEDAVGKVELAAQALFGRADLS-HLDEQTLAAALQETTVAEG 364

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
           + G  L+ L+V AG   S   ARR +K     +NN  I + +  + ++D    G + L  
Sbjct: 365 AVGASLVELLVAAGLEKSNGAARRTIKEGGAYVNNERIDDAEWTVSVEDLLVGGWLVLRK 424

Query: 407 GKKNHIICHLC 417
           GKKN     + 
Sbjct: 425 GKKNFAGAKIS 435


>gi|257439744|ref|ZP_05615499.1| tyrosine--tRNA ligase [Faecalibacterium prausnitzii A2-165]
 gi|257197764|gb|EEU96048.1| tyrosine--tRNA ligase [Faecalibacterium prausnitzii A2-165]
          Length = 405

 Score =  481 bits (1238), Expect = e-133,   Method: Composition-based stats.
 Identities = 173/410 (42%), Positives = 252/410 (61%), Gaps = 8/410 (1%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG + QI++   +D L + G  T YIG+D TA SL AGH   L L+  LQ  G
Sbjct: 3   LYEELQARGLVAQITDNEIID-LINNGKATFYIGFDCTADSLTAGHFMALTLMKRLQMAG 61

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           +KPI+L+GGGT++IGDPS R + R+M+  ++I  N    K     FI +  GK  ALMLN
Sbjct: 62  NKPIALIGGGTTMIGDPSGRTDMRKMLTKEDIAHNAACFKKQMEKFIDFSEGK--ALMLN 119

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL ++ Y++LLR++G+ FSVN ML  +    R+  E+ LSFLEFNYMI+Q+YDF  +
Sbjct: 120 NADWLLNLNYVELLRDVGACFSVNNMLRAKRYEQRM--EKGLSFLEFNYMIMQSYDFYYM 177

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            ++Y C +Q GG DQW N++ G +L  R      +A+T  LLT + G KMGKT   A+WL
Sbjct: 178 FQHYGCNMQFGGDDQWSNMLGGTELIRRKLGKDAYAMTITLLTDSQGKKMGKTAGNAVWL 237

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           +   TSP+ F+QYWRN+ DADV+   + LT LP+ +ID M+  + + +NEAK+I+A E+T
Sbjct: 238 DPNKTSPFEFYQYWRNVGDADVMKCIRMLTFLPLEQIDEMSTWKDQRLNEAKEILAYELT 297

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTN 366
            MVHG EEAEKA  AA   F  +  ++HMP+  +++ +++ G +G+LTL+VKAG A S  
Sbjct: 298 KMVHGEEEAEKAQNAARALFSGAADTEHMPSTQLTEADLTDGSIGILTLMVKAGLAASNG 357

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           EARR +    + ++   ++   +        +   I +  GKK +    L
Sbjct: 358 EARRLVVQGGVLVDGEKVAAPTVSFTADQLKNG--IVIKKGKKIYHKVTL 405


>gi|226312369|ref|YP_002772263.1| tyrosyl-tRNA synthetase [Brevibacillus brevis NBRC 100599]
 gi|226095317|dbj|BAH43759.1| tyrosyl-tRNA synthetase [Brevibacillus brevis NBRC 100599]
          Length = 422

 Score =  481 bits (1238), Expect = e-133,   Method: Composition-based stats.
 Identities = 148/421 (35%), Positives = 219/421 (52%), Gaps = 13/421 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  R  ++Q ++   L  L ++  V+ Y G D T  S+H GHL   M+L   Q  
Sbjct: 4   NIIDELEWREAVNQQTDAEGLRELTNEKAVSLYCGVDPTGDSMHIGHLIPFMVLKRFQLA 63

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+P+ L+GG T  IGDPS R   R +   ++IQEN++K+            G     ++
Sbjct: 64  GHRPVILIGGATGTIGDPSGRQSERSLQTLEQIQENVDKLTAQMKKLF-ITEGDNQIRLV 122

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I  I+ LR+ G  FS+N ML+ + V SRL+    +SF EF+Y ILQ+ D++ 
Sbjct: 123 NNYDWTHKINVIEFLRDYGKNFSINTMLAKDVVSSRLES--GISFTEFSYQILQSLDYLH 180

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKLFALTSPLLTTASGTKMGKTLSGA 244
           L K+ D +LQ+GGSDQWGNI  G+DL  + +    K F LT PL+  A GTK GKT  GA
Sbjct: 181 LYKHEDVQLQIGGSDQWGNITSGLDLIRKKEGSEAKAFGLTIPLMLKADGTKFGKTAGGA 240

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKII 302
           IWL+   T+P+ F+Q+W N DD DVV + K  T L   +I+ +A+    E    EA+K +
Sbjct: 241 IWLDPNKTTPFEFYQFWANTDDRDVVKYLKYFTFLSKEQIEELAEKVQSEPHKREAQKAL 300

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVS------RGMGLLTLI 356
           A E+T  VHG E  E+A       F   I S     I     E+           ++  +
Sbjct: 301 AEEMTRFVHGEELLEQAKRITAALFTGDIKSLSADEIEQGFKEMPTFESTLETKNIVDWL 360

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V+ G   S  +AR  +   AI +N   +++ +L++          I +  GKKN+ +  L
Sbjct: 361 VEIGIEPSKRQAREDITKGAISMNGERVTDLELEVTPSLAIGGRFIIIRKGKKNYSLVKL 420

Query: 417 C 417
            
Sbjct: 421 S 421


>gi|254231884|ref|ZP_04925211.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis C]
 gi|124600943|gb|EAY59953.1| tyrosyl-tRNA synthase tyrS [Mycobacterium tuberculosis C]
          Length = 497

 Score =  481 bits (1238), Expect = e-133,   Method: Composition-based stats.
 Identities = 144/411 (35%), Positives = 226/411 (54%), Gaps = 13/411 (3%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  LS RG I Q ++   L     +G +T Y G+D TA SLHAGHL  L+ L   Q+ G
Sbjct: 5   ILDELSWRGLIAQSTDLDTLAAEAQRGPMTVYAGFDPTAPSLHAGHLVPLLTLRRFQRAG 64

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+PI L GG T +IGDP    E R +  +  + E  E+I+G    F+ +      A++ N
Sbjct: 65  HRPIVLAGGATGMIGDPRDVGE-RSLNEADTVAEWTERIRGQLERFVDFDDSPMGAIVEN 123

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W  S+  I+ LR+IG  FSVN ML+ +++R RL   + +S+ EF+Y++LQA D+VEL
Sbjct: 124 NLEWTGSLSAIEFLRDIGKHFSVNVMLARDTIRRRLA-GEGISYTEFSYLLLQANDYVEL 182

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT-LSGAIW 246
            + + C LQ+GG+DQWGNII G+ L  +     + ALT PL+T A GTK GK+   G++W
Sbjct: 183 HRRHGCTLQIGGADQWGNIIAGVRLVRQKLGATVHALTVPLVTAADGTKFGKSTGGGSLW 242

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIAT 304
           L+ +MTSPY ++QY+ N  DADV+ + +  T L   E+  + +   Q  +   A++ +A+
Sbjct: 243 LDPQMTSPYAWYQYFVNTADADVIRYLRWFTFLSADELAELEQATAQRPQQRAAQRRLAS 302

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQ--------HMPTISISKDEVSRGMGLLTLI 356
           E+T +VHG         A+   F     ++         +   ++++ +     G++ L+
Sbjct: 303 ELTVLVHGEAATAAVEHASRALFGRGELARLDEATLAAALRETTVAELKPGSPDGIVDLL 362

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFG 407
           V +G + S   ARR +    + +NN  + NE+   +  DF     + L  G
Sbjct: 363 VASGLSASKGAARRTIHEGGVSVNNIRVDNEEWVPQSSDFLHGRWLVLRRG 413


>gi|300772115|ref|ZP_07081985.1| tyrosine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33861]
 gi|300760418|gb|EFK57244.1| tyrosine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33861]
          Length = 427

 Score =  481 bits (1238), Expect = e-133,   Method: Composition-based stats.
 Identities = 145/425 (34%), Positives = 225/425 (52%), Gaps = 19/425 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG +  I    E   L ++  V+ YIG+D T  SLH GHLTQ+M L   Q  
Sbjct: 2   NFVEELRWRGMLQDIMPGTE--ELLNKEKVSGYIGFDPTGDSLHVGHLTQIMTLIHFQNA 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP++L+GG T +IGDPSF+   R ++  + +  N+  +K   S F+ +G G+ DA M+
Sbjct: 60  GHKPVALVGGATGMIGDPSFKSAERNLLDEETLNHNVASLKHQLSKFLTFGEGELDAKMV 119

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W    K++D +R+IG   +VN M++ +SV+ RL+ E  LSF EF+Y ++Q YDF  
Sbjct: 120 NNYDWFKDFKFLDFIRDIGKLITVNYMMAKDSVKKRLEGENGLSFTEFSYQLIQGYDFYY 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L K+++C++QMGGSDQWGNI+ G +   R      FALT+ L+  + G K GKT SGA+W
Sbjct: 180 LWKHHNCKIQMGGSDQWGNIVTGTEFIRRQDQGSAFALTTQLIKKSDGQKFGKTESGAVW 239

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIAT 304
           L+ + T+PY ++Q+W N  D D  ++ +  T  P  EI+ +             +K +A 
Sbjct: 240 LDAKKTTPYKYYQFWLNATDDDAKNWIRIFTLKPKEEIEAIIAEHDAAPHTRTVQKALAK 299

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDEVSRGM 350
           +IT   H  ++ E A   +   F                      +P   ISK E++ G+
Sbjct: 300 DITIRTHSEKDYETALKTSEFLFGNGSLDFLGDLEHNAVLDVFDGVPQFKISKSELAEGI 359

Query: 351 GLLTLI-VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
            +L L+  K     S  EAR+  +   + +N   +S        ++  +   I    GKK
Sbjct: 360 NILDLLATKTQIFPSKGEARKMTEGGGVSVNKEKVSGTDATFTTENLINNKYIIAQRGKK 419

Query: 410 NHIIC 414
           N+ + 
Sbjct: 420 NYYLI 424


>gi|228471982|ref|ZP_04056750.1| tyrosine--tRNA ligase [Capnocytophaga gingivalis ATCC 33624]
 gi|228276594|gb|EEK15307.1| tyrosine--tRNA ligase [Capnocytophaga gingivalis ATCC 33624]
          Length = 431

 Score =  480 bits (1237), Expect = e-133,   Method: Composition-based stats.
 Identities = 155/429 (36%), Positives = 231/429 (53%), Gaps = 24/429 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG I  I    E      +G+  AY+G D TA SLH GHL  +M+L   Q  
Sbjct: 3   NFVEELRWRGMIQDIMPETE--QHLLEGLRAAYVGIDPTADSLHIGHLVGVMMLRHFQNC 60

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD-ALM 125
           GHKP +L+GG T +IGDPS +   R ++  + +  NI  IK   + F+ + +  ++ A +
Sbjct: 61  GHKPYALVGGATGMIGDPSGKSTERNLLTEEALAHNIAGIKKQLAKFLDFESTASNRAEL 120

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL---KREQSLSFLEFNYMILQAY 182
           +NN  W+    ++  +R+IG   +VN M++ +SV+ R    +  + +SF EF+Y +LQ +
Sbjct: 121 VNNYDWMKGFSFLSFIRDIGKHITVNYMMAKDSVKKRFDPNENTEGMSFTEFSYQLLQGF 180

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DF+ L +     LQMGGSDQWGNI  G +L  R  + K +ALT PL+T A GTK GK+  
Sbjct: 181 DFLHLYQEKGVTLQMGGSDQWGNITTGTELIRRKASGKAYALTCPLITKADGTKFGKSEG 240

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKK 300
           G +WL+ E TSPY F+QYW N  DAD   + K  T LP  EI+      LQ   +   + 
Sbjct: 241 GNVWLDPEKTSPYKFYQYWINTSDADAQRYIKIFTMLPKEEIETLTAEHLQAPHLRILQN 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDEV 346
            +A E+T +VHG+EE EKA  A+   F  S                   +P   I+ D++
Sbjct: 301 KLAEELTLLVHGKEEWEKAVQASGILFGNSTSEDLKKLDAKTFLEVFDGVPQAEIALDDL 360

Query: 347 SRGMGLLTLI-VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLS 405
             G+ ++  +  K GF  S +EARR L  N+I +N   ++ E   +  +D  +   I L 
Sbjct: 361 KNGLDMIAALSAKTGFIKSNSEARRALGENSISVNKEKVT-EGYCLSEKDLLNQRFILLQ 419

Query: 406 FGKKNHIIC 414
            GKKN+ + 
Sbjct: 420 RGKKNYFLI 428


>gi|297571517|ref|YP_003697291.1| tyrosyl-tRNA synthetase [Arcanobacterium haemolyticum DSM 20595]
 gi|296931864|gb|ADH92672.1| tyrosyl-tRNA synthetase [Arcanobacterium haemolyticum DSM 20595]
          Length = 419

 Score =  480 bits (1237), Expect = e-133,   Method: Composition-based stats.
 Identities = 143/418 (34%), Positives = 229/418 (54%), Gaps = 10/418 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D L  L  RG I Q S+  EL    ++  ++ Y G+D TA+SLH GHL  + ++  LQ  
Sbjct: 3   DVLEELQWRGLIAQHSDIDELRKALNEEKISFYCGFDPTAASLHHGHLVAVKMMRHLQMA 62

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI L+GG T +IGDP  + E R +   + + +  + ++    S + +  G+  A+ +
Sbjct: 63  GHRPIVLVGGATGLIGDPRPKGE-RSLNTRETVAQWTQSLRDQLESLLDF-DGENAAITV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W  S+  ID LR++G  F +  MLS + V  RL+ ++ +SF EF+Y ILQA D++E
Sbjct: 121 NNLDWTQSMSAIDFLRDLGKHFRMGTMLSKDIVARRLQSDEGISFTEFSYQILQANDYLE 180

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + Y+C L++GG+DQWGNI+ G++L  +++   +  LT+ L+T + GTK GKT  GA+W
Sbjct: 181 LFRRYNCTLELGGNDQWGNIVGGMELIRKVEGKSVHVLTNQLITKSDGTKFGKTEGGAVW 240

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIAT 304
           LN EM SPY F+Q+W N  D DV+   K  T LP   I+   +   +     EA++++A 
Sbjct: 241 LNPEMLSPYKFYQFWLNTADNDVIRMLKVFTFLPKERIEELEVEVAERAFAREAQRVLAD 300

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQ-HMPTI-----SISKDEVSRGMGLLTLIVK 358
           E+TT VHG E   +   A+   F     +     T+      +   +   G  L  ++V 
Sbjct: 301 EVTTWVHGAETTARVKDASAVLFGKKEPADVDAATLRDAVAELPSVKAELGASLQDVLVD 360

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             F      ARR + +  + +NN  + +E+  +   D  + G I +  G+KN  + H+
Sbjct: 361 LAFEKGRGAARRTIGAGGVSLNNQKVDDEERVLTEADVLAGGVILIRKGRKNMAVIHI 418


>gi|315655592|ref|ZP_07908490.1| tyrosine--tRNA ligase [Mobiluncus curtisii ATCC 51333]
 gi|315489656|gb|EFU79283.1| tyrosine--tRNA ligase [Mobiluncus curtisii ATCC 51333]
          Length = 425

 Score =  480 bits (1237), Expect = e-133,   Method: Composition-based stats.
 Identities = 143/413 (34%), Positives = 231/413 (55%), Gaps = 11/413 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           SD +  L+ RG I Q ++   L    S+G +T Y G+D TA+SLH GHL QL+++  LQ 
Sbjct: 7   SDLIDELTWRGLIKQHTDMDALRRALSEGPLTFYCGFDPTAASLHHGHLVQLIMMRHLQL 66

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH PI+L+GG T +IGDP      R++   + +    ++++     F+ +  G+  A M
Sbjct: 67  AGHHPIALVGGATGLIGDPRM-TAERQLQDKETVAGWADRLQRQIERFLDF-EGENPARM 124

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  W   +  IDLLR++G  F +  ML+ ++V  RLK ++ +SF EF+Y ILQA D++
Sbjct: 125 VNNLEWTAPLSAIDLLRDLGKNFRMGTMLAKDAVARRLKSDEGISFTEFSYQILQANDYL 184

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           +L + Y   L+ GG+DQWGN++ G+DL  +++   +  +T+PL+T + GTK GK+  GAI
Sbjct: 185 QLYRKYGVTLETGGNDQWGNLVGGMDLIRKIEGKDVHVMTTPLITKSDGTKFGKSEGGAI 244

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIA 303
           WL+ EM SPY F+Q+W N +DADVV+  K  T L   EI+   +   +      A++ +A
Sbjct: 245 WLDPEMFSPYAFYQFWLNTEDADVVNLLKVFTFLSREEIEALEIETKENPGKRAAQRALA 304

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQ------HMPTISISKDEVSRG-MGLLTLI 356
             +TT+VHG ++ E+   A+   F      +         T+ + + +V  G   +L L+
Sbjct: 305 EAVTTLVHGADQTERVKAASTALFGRGDLREVDGKTLVAATVDLPRSQVVLGQTNILHLL 364

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
           V +G       A+R + S    +NN  + +E   I  +D    G +    GK+
Sbjct: 365 VDSGLEKGIGAAKRTVASGGAYLNNEKVEDEGRVITAEDMLPGGVVLFRKGKR 417


>gi|311899091|dbj|BAJ31499.1| putative tyrosyl-tRNA synthetase [Kitasatospora setae KM-6054]
          Length = 421

 Score =  480 bits (1237), Expect = e-133,   Method: Composition-based stats.
 Identities = 143/420 (34%), Positives = 228/420 (54%), Gaps = 10/420 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +D +  L  RG I   ++   L    + G VT Y G+D TA SLH G+L QL+ +  +Q+
Sbjct: 2   TDIVDELQWRGLIALSTDEDALRKAFADGPVTFYCGFDPTAPSLHLGNLVQLLTMRRIQR 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            G+ P+ L+GG T +IGDP      R +   + +   +++++   S F+ +  G+  A +
Sbjct: 62  AGNLPLGLVGGATGLIGDPKP-TAERVLNDPETVAAWVDRLRAQVSRFLDF-EGEYAARI 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  W   +  I LLR++G +F VN M++ E+V  RL  +  +S+ EF+Y ILQ  DF+
Sbjct: 120 VNNLDWTSGMSAISLLRDVGKYFRVNNMIAKEAVARRLNSDAGISYTEFSYQILQGMDFL 179

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           EL + Y C LQ GGSDQWGN+  G DL  + ++  + AL +PL+T A GTK GKT SG +
Sbjct: 180 ELNRRYGCTLQTGGSDQWGNLTAGTDLIRKAESRSVHALATPLITKADGTKFGKTESGTV 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIA 303
           WL+ E+T+PY F+Q+W N DD DV  F +  +     EI+++ +   +      A++ +A
Sbjct: 240 WLDPELTTPYAFYQFWLNADDRDVAKFLRIFSFRTREEIEQLERDTAERPAARLAQRALA 299

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI------SISKDEVSRGMGLLTLIV 357
            E+TT+VHG ++ E+   A+   F         P         + K  V+    ++ L+V
Sbjct: 300 EELTTLVHGADQYERVVAASKALFGQGDLVDLEPATLASALAEVPKATVAELGQIVDLLV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           + G A S + ARR +K     +NN+ +++E+      D      I L  GK+N     L 
Sbjct: 360 ETGLAPSRSGARRTIKEGGAYLNNAKVTDEEAVATTTDLLHGRWILLRRGKRNLAAVELA 419


>gi|261408561|ref|YP_003244802.1| tyrosyl-tRNA synthetase [Paenibacillus sp. Y412MC10]
 gi|261285024|gb|ACX66995.1| tyrosyl-tRNA synthetase [Paenibacillus sp. Y412MC10]
          Length = 419

 Score =  480 bits (1237), Expect = e-133,   Method: Composition-based stats.
 Identities = 147/425 (34%), Positives = 217/425 (51%), Gaps = 21/425 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  R  I+Q ++   L  L ++  ++ Y G D T  S+H GHL   ++L   Q  
Sbjct: 2   NIIDELEWRDAINQQTDAEGLRELTNEKSISLYCGVDPTGDSMHIGHLIPFIMLKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+P+ L+GG T  IGDPS R   R +   +++Q N++ + G          G     M+
Sbjct: 62  GHRPVILIGGATGTIGDPSGRQTERSLQTLEQVQANVDALTGQMKKLF-VTEGDNQIRMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I  I+ LR+ G  FS+N ML+ + V SRL     +SF EF+Y ILQ+ D++ 
Sbjct: 121 NNYDWTHKINIIEFLRDYGKNFSINSMLAKDVVASRLDS--GISFTEFSYQILQSVDYLH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSGA 244
           L ++ D +LQ+GGSDQWGNI  G+DL  + + P  K F LT PL+  A GTK GKT  GA
Sbjct: 179 LYQHEDVQLQIGGSDQWGNITSGLDLIRKKEGPEAKAFGLTIPLMLKADGTKFGKTAGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKII 302
           IWL+   T+P+ F+Q+W N DD DVV + K  T L   +ID +A+    E    EA+K +
Sbjct: 239 IWLDPNKTTPFEFYQFWANTDDRDVVKYLKYFTFLTKEQIDELAEKVQSEPHKREAQKTL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGL 352
           A E+T  VHG E  E+A       F   I S          + MPT   +         +
Sbjct: 299 AEEMTRFVHGEEMLEQAKRITAALFSGDIKSLTADEIEQGFKEMPTFEAT----PETKNI 354

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           +  +V  G   S  +AR  +   AI +N   +S+   ++          I +  GKKN+ 
Sbjct: 355 VDWLVDLGIEPSKRQAREDITKGAISMNGERVSDLDHEVTADQAIGGRFIIIRKGKKNYS 414

Query: 413 ICHLC 417
           +  + 
Sbjct: 415 LVKMS 419


>gi|259048229|ref|ZP_05738630.1| tyrosine--tRNA ligase [Granulicatella adiacens ATCC 49175]
 gi|259035290|gb|EEW36545.1| tyrosine--tRNA ligase [Granulicatella adiacens ATCC 49175]
          Length = 421

 Score =  480 bits (1237), Expect = e-133,   Method: Composition-based stats.
 Identities = 141/425 (33%), Positives = 222/425 (52%), Gaps = 21/425 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG I+Q+++   L  L ++  V+ Y G D T  S+H GHL   M+L   Q  
Sbjct: 2   NIIDDLEWRGAINQMTDEEGLRALTNEKAVSLYCGVDPTGDSMHIGHLIPFMILRRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSS-FIKYGTGKTDALM 125
           GHKP+ L+GG T  IGDPS R   R +   +++Q N+EK+       F      +    +
Sbjct: 62  GHKPVILIGGATGSIGDPSGRTSERVLQSMEQVQHNVEKLTAQMKKLFFTTDEDQATLRL 121

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  W   +  +D LR+ G  F++N ML+ + V SRL  E  +SF EF+Y ILQ+ DF+
Sbjct: 122 VNNYDWTKDLSLLDFLRDYGKHFNLNTMLAKDVVASRL--EVGISFTEFSYQILQSMDFL 179

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK--LFALTSPLLTTASGTKMGKTLSG 243
            L K  D ++Q+GG+DQWGNI  G++L  +++  +   + LT PL+  + GTK GK+  G
Sbjct: 180 HLFKTEDVQVQIGGADQWGNITSGLELIRKVEGAESRAYGLTIPLMLKSDGTKFGKSAGG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKI 301
           A+WL+ E T+PY F+Q+W N DD DV+ + K  T L   EI+ + +    E    EA+  
Sbjct: 240 AVWLDPEKTTPYEFYQFWLNQDDRDVIKYIKYFTFLDREEIEALEEKVATEPHKREAQIR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMG 351
           +A E+T  VHG +  E A       F  ++            ++MPT   SK        
Sbjct: 300 LAEEVTRFVHGEKALEDAKKITNALFTGNVQQLTADEIEQGFKNMPTFESSK----EPQN 355

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           L T +V  G   S  ++R  +++ AI IN   +++ + +   +       + +  GKK +
Sbjct: 356 LATWLVDLGIEPSRRQSREDIQNGAISINGEKVTDLEFEWTKEQSFEERFVIVRRGKKKY 415

Query: 412 IICHL 416
            +  L
Sbjct: 416 FLVVL 420


>gi|257056540|ref|YP_003134372.1| tyrosyl-tRNA synthetase [Saccharomonospora viridis DSM 43017]
 gi|256586412|gb|ACU97545.1| tyrosyl-tRNA synthetase [Saccharomonospora viridis DSM 43017]
          Length = 424

 Score =  480 bits (1237), Expect = e-133,   Method: Composition-based stats.
 Identities = 145/420 (34%), Positives = 230/420 (54%), Gaps = 13/420 (3%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  LS RG I Q ++   L      G +  Y G+D TA SLHAGHL Q+++L   Q  G
Sbjct: 5   ILDELSWRGLIAQSTDLDALRRDLDSGPLAVYAGFDPTAPSLHAGHLVQMLMLRRFQDAG 64

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+P+ L GGGT +IGDP    E R +   ++++E  ++++G  + F+ +       + +N
Sbjct: 65  HRPVLLAGGGTGLIGDPRDVGE-RVLHSEEQVREWADRLRGQLARFVDFDHPDVPPIEVN 123

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL S+     LR++G  FS+N ML+ E+V+ RL+    +S+ EF+YM+LQA D+ EL
Sbjct: 124 NLDWLGSMTVPTFLRDVGKHFSINTMLARETVKRRLE-GDGISYTEFSYMLLQAADYREL 182

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT-LSGAIW 246
            + Y+ RLQ+GGSDQWGNII G+DL  R+   ++ ALT+PL+T + G K+GK+   G +W
Sbjct: 183 FERYNVRLQVGGSDQWGNIIAGVDLIRRVHGAQVHALTTPLITDSEGRKLGKSTGGGNVW 242

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIAT 304
           ++ EMTSPY ++QY+ N+ DADVV   K LT L   EI  +     +     +A++ +A 
Sbjct: 243 VDPEMTSPYAWYQYFLNVPDADVVRCLKLLTFLDADEIGELETATNERPAARQAQRRLAQ 302

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQ--------HMPTISISKDEVSRGMGLLTLI 356
           E+T +VHG E+  +   A+   F      +         M  +   +  ++    ++ L+
Sbjct: 303 ELTDLVHGPEQTRQVVAASQALFGRGDLRELDAATLDAAMAEVPTGEVRLADEPTIVELL 362

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V  G   S   ARR +K     +NN+ I+ E  + +  D      + +  GK+      +
Sbjct: 363 VAGGLVESKGAARRTVKEGGAYVNNTKITEEDWKPEPSDVLHGHWLVVRRGKRTLAGVRV 422


>gi|312869291|ref|ZP_07729458.1| tyrosine--tRNA ligase [Lactobacillus oris PB013-T2-3]
 gi|311095165|gb|EFQ53442.1| tyrosine--tRNA ligase [Lactobacillus oris PB013-T2-3]
          Length = 426

 Score =  480 bits (1236), Expect = e-133,   Method: Composition-based stats.
 Identities = 152/419 (36%), Positives = 224/419 (53%), Gaps = 15/419 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D L  L  RG I+Q ++   L  L  +  V+ Y G D T  SLH GHL   ++L   Q  
Sbjct: 13  DILEDLEWRGAINQCTDLEGLRDLLKEKKVSLYCGTDPTGDSLHIGHLIPFIMLKRFQLA 72

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P  L+GGGT  IGDPS R   R++  ++++Q N E +            G  +  ++
Sbjct: 73  GHHPYILIGGGTGFIGDPSGRKSERQLQTAEQVQHNKEGLTKQMIKLF----GTENFDIV 128

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           +N  WL  I  +D LR+ G  F++N MLS E+V SRLK    +SF EF+Y ILQ+ DF+ 
Sbjct: 129 DNYDWLSKISLLDFLRDYGKSFNINTMLSKEAVASRLKN--GISFTEFSYQILQSIDFLH 186

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASGTKMGKTLSGAI 245
           L    D +LQ+GG+DQWGN+  G+DL    K   K F LT PL+  A GTK GKT  GAI
Sbjct: 187 LNNTKDIQLQIGGADQWGNLTNGVDLIHSKKPNEKAFGLTIPLMLKADGTKFGKTAGGAI 246

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIA 303
           WL+ + TSP+ F+Q+W N DD DVV + K  T L   EID +A+    E    EA++ +A
Sbjct: 247 WLDPKKTSPFTFYQFWLNQDDRDVVKYLKYFTFLSHKEIDELAEKVKTEPQKREAQRRLA 306

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS-----ISKDEVSR-GMGLLTLIV 357
            E+T  VHG +  E+A   +   F  +I       +      +   EV +  + ++  +V
Sbjct: 307 EEVTKFVHGEKAMEQAKKISEILFSGNIAELSTAELEQAFEKVPSVEVGKTPINIIDWLV 366

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            +   TS  +AR  +K+ AI IN   +++E+  +   D      + +  GK+N+ +  +
Sbjct: 367 NSEIETSKRQAREDIKNGAITINGRKVNDEEFIVDPSDNFDGKYVVVRKGKRNYFLAKV 425


>gi|268610300|ref|ZP_06144027.1| tyrosyl-tRNA synthetase [Ruminococcus flavefaciens FD-1]
          Length = 405

 Score =  480 bits (1236), Expect = e-133,   Method: Composition-based stats.
 Identities = 185/411 (45%), Positives = 265/411 (64%), Gaps = 13/411 (3%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
              L  RG + Q+++ +E++ L + G  T YIG+D TA SLH GH   L L+  LQ  G+
Sbjct: 4   FEELKRRGLLAQLTDEKEIEELVNAGKATFYIGFDPTADSLHVGHFMALCLMKRLQMAGN 63

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           KPI L+GGGT++IGDPS + + R+MM ++ IQ N++  K   S FI +   K  A+++NN
Sbjct: 64  KPIVLIGGGTAMIGDPSGKTDMRKMMTAETIQHNVDCFKKQMSRFIDFSEDK--AIIVNN 121

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL  + YI+LLR++G+ FSVNRMLS E  + R++R   L+FLEFNYMI+Q+YDF+EL 
Sbjct: 122 ADWLMKLNYIELLRDVGAHFSVNRMLSHECYKQRMER--GLTFLEFNYMIMQSYDFLELF 179

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
           + Y C +Q GG DQW N++ G +L  R      +A+T  LL  + G KMGKT  GA+WL+
Sbjct: 180 QKYGCNMQFGGDDQWANMLGGTELIRRKLGKDAYAMTITLLLNSEGKKMGKTEKGAVWLD 239

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK-LQGKEINEAKKIIATEIT 307
            E T+PY F+QYWRN+ DADV+   K LT +P+ +I+ M K ++G E N+AK+++A E+T
Sbjct: 240 PEKTTPYEFFQYWRNVADADVIKCLKMLTFVPVEQIEEMEKTMEGAEYNKAKELLAYELT 299

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTN 366
            +VHG EEAEKA  AA   F  S  +++MPT+ I   E++ G +GLLTL+VKA  A S +
Sbjct: 300 KLVHGEEEAEKAKAAAKALFGGSGSNENMPTVEIDSAELTDGALGLLTLLVKAELAPSIS 359

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK--NHIICH 415
           EARR ++   I +N+    + K QIKL+     G   +  GKK    +I  
Sbjct: 360 EARRLVQQGGITVNDEKKIDPKEQIKLE-----GETIVRKGKKAFKKVIVK 405


>gi|167462682|ref|ZP_02327771.1| tyrosyl-tRNA synthetase [Paenibacillus larvae subsp. larvae
           BRL-230010]
          Length = 420

 Score =  480 bits (1236), Expect = e-133,   Method: Composition-based stats.
 Identities = 146/424 (34%), Positives = 221/424 (52%), Gaps = 21/424 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  R  I+Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  
Sbjct: 2   NIIDELEWRDAINQQTDAEGLRKLVEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLF 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+P+ L+GG T  IGDPS R   R++   +++Q N+E +         +G G  +  M+
Sbjct: 62  GHRPVILIGGATGTIGDPSGRQTERQLQTLEQVQHNVEALTAQMKKLFGFG-GDNEVKMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   +  +D LR+ G  FSVN ML+ + V SRL+    +SF EF+Y ILQ+ DF  
Sbjct: 121 NNYDWTHKMNVLDFLRDYGKNFSVNTMLAKDIVASRLES--GISFTEFSYQILQSMDFHH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSGA 244
           L K  D +LQ+GG+DQWGNI  G+DL  + + P  K F LT PL+  A GTK GKT  GA
Sbjct: 179 LFKEEDVQLQIGGADQWGNITSGLDLIRKKEGPDAKAFGLTIPLMLKADGTKFGKTAGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKII 302
           IWL+   T+P+ F+Q+W N DD DVV + K  T L    I+ +A+    +    EA+K++
Sbjct: 239 IWLDPAKTTPFEFYQFWVNTDDRDVVKYLKFFTFLTKEVIEELAQKVETDPGKREAQKVL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGL 352
           A E+T  VHG E   ++       F   I            + MPT   SK        +
Sbjct: 299 AAEMTKFVHGEEALAQSGKITEALFSGDIKGLTADEIEQGFKDMPTFHASK----ESKNI 354

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           +  +V+     S  +AR  + + AI +N   +S+   ++ +++      I +  GKKN+ 
Sbjct: 355 VDWLVELRIEPSKRQAREDITNGAISMNGERVSDLNTEVTVENSFDGRFIIIRKGKKNYS 414

Query: 413 ICHL 416
           +  L
Sbjct: 415 LVKL 418


>gi|296129499|ref|YP_003636749.1| tyrosyl-tRNA synthetase [Cellulomonas flavigena DSM 20109]
 gi|296021314|gb|ADG74550.1| tyrosyl-tRNA synthetase [Cellulomonas flavigena DSM 20109]
          Length = 427

 Score =  480 bits (1236), Expect = e-133,   Method: Composition-based stats.
 Identities = 140/417 (33%), Positives = 221/417 (52%), Gaps = 10/417 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +D L  L+ RG + Q ++   L    + G V+ Y G+D TA SLH G+L Q++ +  LQ 
Sbjct: 2   TDILDELAWRGLLSQHTDLDALRTEMAAGPVSLYCGFDPTAPSLHIGNLVQILTVRRLQD 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+P +L+GG T +IGDP    E R +     +   +E+I+G  +  +++  G   A M
Sbjct: 62  AGHRPFALVGGATGLIGDPKMTGE-RTLNSPDVVAGWVERIRGQIAPLLRF-DGPNAATM 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  W   +  ID LR++G  + +  ML+ ++V  RL  EQ +SF EF+Y ILQ  DF+
Sbjct: 120 VNNLDWTAGMSAIDFLRDVGKHYRLGTMLAKDTVARRLNSEQGISFTEFSYQILQGMDFL 179

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           EL + +   LQ GG+DQWGN++ G++L  +++   + A+T+PL+T A GTK GKT SG +
Sbjct: 180 ELYRRHGVHLQTGGNDQWGNLLSGVELVRKVEGVPVHAITTPLITKADGTKFGKTESGTV 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIA 303
           WL+  MT+PY F+Q+W N DDADV  + K  T     EI     A  Q     EA++ +A
Sbjct: 240 WLDPAMTTPYAFYQFWLNADDADVAGYLKVFTFRTREEIATLEEAVAQRPAAREAQRALA 299

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIH-SQHMPTISISKDEVS-----RGMGLLTLIV 357
            ++T +VHG + A+    A+   F      +    T++ +  E+       G  L+ L  
Sbjct: 300 YDVTALVHGTDAADAVVAASQALFGRGELGALDEATLAAAVAELPTAPGRAGDVLVDLFA 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
             G   S   ARR +      +NN  ++ +   +  +D        L  GK+   + 
Sbjct: 360 ATGVVASKAAARRAIAEGGASVNNVRVTEDGATLGAEDLLHGRWAVLRRGKRTLAVV 416


>gi|148554432|ref|YP_001262014.1| tyrosyl-tRNA synthetase [Sphingomonas wittichii RW1]
 gi|148499622|gb|ABQ67876.1| tyrosyl-tRNA synthetase [Sphingomonas wittichii RW1]
          Length = 420

 Score =  480 bits (1236), Expect = e-133,   Method: Composition-based stats.
 Identities = 200/414 (48%), Positives = 274/414 (66%), Gaps = 9/414 (2%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  ++SD L +L ERG+IHQ+++   LD L    V+  YIG+D TA SLH G L Q+MLL
Sbjct: 14  MTEYRSDLLRLLDERGYIHQVTDGAALDALALSSVIPGYIGFDPTAPSLHVGSLVQIMLL 73

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             LQ+ GHKPI LMGGGT  IGDPSF+DE+R++M ++ I  N+  IK IF  F+ +G G 
Sbjct: 74  RRLQQAGHKPIVLMGGGTGKIGDPSFKDEARKLMTTETIAANVASIKRIFERFLTFGDGP 133

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           +DA+M++N  WL +++YI  LRE+G  FS+NRMLSF+SV+ RL REQSLSFLEFNYMILQ
Sbjct: 134 SDAVMVDNADWLDTLEYIPFLREVGQHFSINRMLSFDSVKLRLDREQSLSFLEFNYMILQ 193

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDF+ELAK   CRLQMGGSDQWGNI+ GI+L  R+   ++F +T+PL+TTA G KMGKT
Sbjct: 194 AYDFMELAKRRQCRLQMGGSDQWGNIVNGIELSRRMLGTEVFGVTTPLITTADGGKMGKT 253

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           +SGA+WLN+E    Y++WQ+WRN  D DV  F +  T LP+ EI R+  L+G+EIN+AK 
Sbjct: 254 MSGAVWLNEESLPAYDYWQFWRNSHDKDVGRFLRLFTDLPLDEIARLEALEGQEINQAKI 313

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           ++A E T M  G + A  AA  A   F+       +PT+++       G+ L+  +V  G
Sbjct: 314 VLANEATAMCRGADAAAAAAETARRTFEEGQAGGDLPTLAVP----EGGISLIDALVGLG 369

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           F  S  EA+R L   A++++     +++             +K+S GKK H + 
Sbjct: 370 FTASKGEAKRKLAEGAVRVDGEPEKDDRRV-----EIGATALKISLGKKKHGLL 418


>gi|298345143|ref|YP_003717830.1| tyrosine--tRNA ligase [Mobiluncus curtisii ATCC 43063]
 gi|304390730|ref|ZP_07372682.1| tyrosine--tRNA ligase [Mobiluncus curtisii subsp. curtisii ATCC
           35241]
 gi|298235204|gb|ADI66336.1| tyrosine--tRNA ligase [Mobiluncus curtisii ATCC 43063]
 gi|304325613|gb|EFL92859.1| tyrosine--tRNA ligase [Mobiluncus curtisii subsp. curtisii ATCC
           35241]
          Length = 425

 Score =  480 bits (1235), Expect = e-133,   Method: Composition-based stats.
 Identities = 143/413 (34%), Positives = 230/413 (55%), Gaps = 11/413 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           SD +  L+ RG I Q ++   L    S+G +T Y G+D TA+SLH GHL QL+++  LQ 
Sbjct: 7   SDLIDELTWRGLIKQHTDMDALRRALSEGPLTFYCGFDPTAASLHHGHLVQLIMMRHLQL 66

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH PI+L+GG T +IGDP      R++   + +    ++++     F+ +  G+  A M
Sbjct: 67  AGHHPIALVGGATGLIGDPRM-TAERQLQDKETVAGWADRLQCQIERFLDF-EGENPARM 124

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  W   +  IDLLR++G  F +  ML+ ++V  RLK ++ +SF EF+Y ILQA D++
Sbjct: 125 VNNLEWTAPLSAIDLLRDLGKNFRMGTMLAKDAVARRLKSDEGISFTEFSYQILQANDYL 184

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           +L + Y   L+ GG+DQWGN++ G+DL  +++   +  +T+PL+T + GTK GK+  GAI
Sbjct: 185 QLYRKYGVTLETGGNDQWGNLVGGMDLIRKVEGKDVHVMTTPLITKSDGTKFGKSEGGAI 244

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIA 303
           WL+ EM SPY F+Q+W N +DADVV+  K  T L   EI+       +      A++ +A
Sbjct: 245 WLDPEMFSPYAFYQFWLNTEDADVVNLLKVFTFLSRGEIEALETETKENPGKRAAQRALA 304

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQ------HMPTISISKDEVSRG-MGLLTLI 356
             +TT+VHG ++ E+   A+   F      +         T+ + + +V  G   +L L+
Sbjct: 305 EAVTTLVHGADQTERVKAASTALFGRGDLREVDGKTLVAATVDLPRTQVVLGQTNILHLL 364

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
           V +G       A+R + S    +NN  + +E   I  +D    G +    GK+
Sbjct: 365 VDSGLEKGIGAAKRTVASGGAYLNNEKVEDEGRVITAEDVLPGGVVLFRKGKR 417


>gi|19703406|ref|NP_602968.1| tyrosyl-tRNA synthetase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 25586]
 gi|81485043|sp|Q8RH57|SYY_FUSNN RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|19713476|gb|AAL94267.1| Tyrosyl-tRNA synthetase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 25586]
          Length = 406

 Score =  480 bits (1235), Expect = e-133,   Method: Composition-based stats.
 Identities = 168/394 (42%), Positives = 241/394 (61%), Gaps = 6/394 (1%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M    ++   +L ERG++ Q+++  E+  +  +  VT YIG+D TA SLH GH   +M +
Sbjct: 1   MEGKMANVYDVLKERGYLKQLTHEEEIREILGKEKVTFYIGFDPTADSLHVGHFIAMMFM 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             +Q+ GH+PI+L GGGT +IGDPS R + R MM  + I  N+E IK     FI +   K
Sbjct: 61  AHMQQHGHRPIALAGGGTGMIGDPSGRSDMRTMMTVEMIDHNVECIKKQMQKFIDFSEDK 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
             A++ NN  WL ++ YI+ LR++G  FSVNRML+ E  +SR+  E  LSFLEFNYMI+Q
Sbjct: 121 --AILANNADWLRNLNYIEFLRDVGEHFSVNRMLAAECYKSRM--ENGLSFLEFNYMIMQ 176

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDF  L   Y+C +Q+GG DQW N+I G++L  R      +A+T  LLT + G KMGKT
Sbjct: 177 AYDFYILNHKYNCTMQLGGDDQWSNMIAGVELLRRKDRKPAYAMTCTLLTNSEGKKMGKT 236

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
             GA+WL+ E T+PY F+QYWRNIDD DV      LT LPM E+ R+  L+  EINEAKK
Sbjct: 237 AKGALWLDPEKTTPYEFYQYWRNIDDQDVEKCLALLTFLPMDEVRRLGALKDAEINEAKK 296

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           ++A E+T ++HG EEA KA  A    F    +  + P I ++ ++ S+   LL ++V   
Sbjct: 297 VLAYEVTKIIHGEEEATKAKEATEALFGSGNNLDNAPKIEVTDEDFSKE--LLDVLVDRK 354

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
              + +E RR ++ N + +N+  I + K  +   
Sbjct: 355 IIKTKSEGRRLIEQNGMSLNDEKIKDVKFTLNDN 388


>gi|227888973|ref|ZP_04006778.1| tyrosine--tRNA ligase [Lactobacillus johnsonii ATCC 33200]
 gi|227850561|gb|EEJ60647.1| tyrosine--tRNA ligase [Lactobacillus johnsonii ATCC 33200]
          Length = 420

 Score =  480 bits (1235), Expect = e-133,   Method: Composition-based stats.
 Identities = 149/423 (35%), Positives = 217/423 (51%), Gaps = 17/423 (4%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQ-GVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           K D L  L  RG I+Q ++   L    ++   +  Y G D T  SLH GHL   M++   
Sbjct: 3   KFDILEDLKWRGAINQETDEEGLRKYLAEHDDLALYCGTDPTGDSLHIGHLIPFMIMKRF 62

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q  G+ P+ L+GGGT  IGDPS R   R +  +++++ N EK+            G  + 
Sbjct: 63  QMAGYHPVILIGGGTGSIGDPSGRKTERVLQTAEQVKHNEEKLTAQMKKLF----GTENF 118

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            + NN  WL  +  ID LR+ G FF VN M++ + V SRL  E  +SF EF Y ILQA D
Sbjct: 119 EIKNNAEWLGKLNLIDFLRDYGKFFQVNNMINKDVVASRL--ENGISFTEFTYQILQAID 176

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTL 241
           F  L K+   +LQ+GGSDQWGNI  GIDL  +L+      F LT PL+  A GTK GK+ 
Sbjct: 177 FYHLNKDNGVQLQIGGSDQWGNITAGIDLIHKLEGADRPAFGLTIPLMLKADGTKFGKSA 236

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAK 299
            GA+WL+ E TSPY F+Q+W N DD DV+ + K  T L   EI+ +A+   KE     A+
Sbjct: 237 GGAVWLDPEKTSPYEFYQFWINQDDRDVIKYLKYFTFLSREEIEDLAEKTEKEPWKRAAQ 296

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRGMGLL 353
           K +A E+T  VHG E  ++A       F  ++ S  +P I        S +       ++
Sbjct: 297 KKLAEEVTKFVHGEEGLKEAQMITEALFSGNVKSLSVPQIEQALKNAPSAEVTHEAKNIV 356

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
             +V+     S  +AR  +K+ AI +N    ++    I+         + +  GK+ + +
Sbjct: 357 EFLVETKIEPSKRQAREDVKNGAIYVNGERQNDIDFIIEPDSDFDGKYVIIRKGKRKYTL 416

Query: 414 CHL 416
             +
Sbjct: 417 VKI 419


>gi|291515289|emb|CBK64499.1| tyrosyl-tRNA synthetase [Alistipes shahii WAL 8301]
          Length = 434

 Score =  479 bits (1234), Expect = e-133,   Method: Composition-based stats.
 Identities = 136/430 (31%), Positives = 221/430 (51%), Gaps = 23/430 (5%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
            +F+  L  RG IH I           +   TAY+G D TA SLH GHL  +M+L   Q 
Sbjct: 4   KNFIEELEWRGMIHTIMP--GAKEQLEKEQTTAYLGIDPTADSLHIGHLVGVMILKHFQM 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG-TGKTDAL 124
            GH+P++L+GG T +IGDPS + + R ++  + ++ N E IK   +  + +       A 
Sbjct: 62  CGHRPLALVGGATGMIGDPSGKSQERNLLDEKTLRHNQEAIKRQLAKLLDFDSDAPNAAA 121

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK-REQSLSFLEFNYMILQAYD 183
           ++NN  W+    ++D +R+IG   +VN M++ +SV+ R       +SF EF Y ++Q YD
Sbjct: 122 LVNNYDWMKEFTFLDFIRDIGKCITVNYMMAKDSVKKRFNGEGDGMSFTEFTYQLVQGYD 181

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKLFALTSPLLTTASGTKMGKTL 241
           F+ L +  +C++Q+GG+DQWGNI  G +L  R      + F +T PL+T A GTK GKT 
Sbjct: 182 FLHLYETMNCKIQLGGADQWGNITTGTELIRRKLGAEAEAFGITCPLITKADGTKFGKTE 241

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAK 299
           SG +WL+   TSPY F+Q+W N+ D D   + K  T L    ID +         +   +
Sbjct: 242 SGNVWLDPRYTSPYKFYQFWLNVSDEDAKRYIKIFTLLDRETIDALIAEHDAAPHLRVLQ 301

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDE 345
           K +A EIT M+H REE EKA  A+   F  +                 + +P   +++ E
Sbjct: 302 KRLAEEITCMIHSREEYEKAVEASAILFGGATSEALRRLDEQTLLQVFEGVPQYRVARTE 361

Query: 346 VSRGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           ++ G+  + L  + +    S  E R+ ++   + +N   +++    +   D  +   + +
Sbjct: 362 LAAGIPFVDLCAEKSDIFASKGECRKLVQGGGVSLNKEKLADAMRPVTDADLIAGKYLLV 421

Query: 405 SFGKKNHIIC 414
             GKKN+ + 
Sbjct: 422 QRGKKNYYLV 431


>gi|240170136|ref|ZP_04748795.1| tyrosyl-tRNA synthetase [Mycobacterium kansasii ATCC 12478]
          Length = 425

 Score =  479 bits (1234), Expect = e-133,   Method: Composition-based stats.
 Identities = 147/425 (34%), Positives = 230/425 (54%), Gaps = 16/425 (3%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L+ RG I Q ++   L     +G +T Y G+D TA+SLHAGHL  L+ L   Q+ G
Sbjct: 2   ILDELAWRGLIAQSTDLDALAAELRRGPMTLYAGFDPTAASLHAGHLVPLLTLRRFQRAG 61

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY---GTGKTDAL 124
           H+PI L GG T +IGDP    E R +     + E  E+I+G    F+ +   G   T A+
Sbjct: 62  HRPIVLAGGATGMIGDPRDVGE-RTLNDVDTVAEWTERIRGQLERFVDFSDSGDSPTGAI 120

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           + NN  W  ++  I+ LR++G  FSVN ML  ++VR RL+  + +S+ EF+YM+LQA D+
Sbjct: 121 VENNIEWTSAMSAIEFLRDVGKHFSVNVMLDRDTVRRRLE-GEGISYTEFSYMLLQANDY 179

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT-LSG 243
           VEL + + C LQ+GGSDQWGNII G+ L  +     + ALT PL+T A GTK GK+   G
Sbjct: 180 VELHRRHGCALQIGGSDQWGNIIAGVRLVRQKLGATVHALTVPLVTAADGTKFGKSTGGG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKI 301
           ++WL+ ++TSPY ++QY+ N  DADV+ + +  T L   E+  + +   +      A++ 
Sbjct: 240 SLWLDPQLTSPYAWYQYFVNTSDADVIRYLRWFTFLSAEELAELEQATAERPQQRAAQRR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQ--------HMPTISISKDEVSRGMGLL 353
           +A E+T++VHG         A+   F  +  S+         +   ++++ +     G++
Sbjct: 300 LAAELTSLVHGEAATAAVEHASRALFGHAELSRLDEPTLAAALRETTVAELKPGSPDGIV 359

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            L+V  G A S   ARR +    + +NN  +  ++   +  DF     + L  GK+N   
Sbjct: 360 DLLVATGLADSRKAARRTINEGGVSVNNIRVETDEWTPQGMDFLHGRWLVLRRGKRNVAG 419

Query: 414 CHLCG 418
               G
Sbjct: 420 VERVG 424


>gi|326440396|ref|ZP_08215130.1| tyrosyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
          Length = 428

 Score =  479 bits (1234), Expect = e-133,   Method: Composition-based stats.
 Identities = 146/422 (34%), Positives = 226/422 (53%), Gaps = 11/422 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +D +  L  RG I Q ++   L    + G VT Y G+D TA SLH G+L Q++ +  +Q 
Sbjct: 2   TDIVDELQWRGLIAQSTDEDALRKAFADGPVTFYCGFDPTAPSLHLGNLVQILTMRRIQL 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            G++P+ L+GG T +IGDP   +  R +   + + E + +++     F+ +  G   A M
Sbjct: 62  AGNRPLGLVGGATGLIGDPKP-NAERTLNAPETVAEWVGRLRAQIERFLDF-EGPYAARM 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  W   +  ID LR++G +F VN+M++ E+V  RL  +  +S+ EF+Y ILQ  D++
Sbjct: 120 VNNLDWTSGLSAIDFLRDVGKYFRVNKMIAKEAVARRLNSDAGISYTEFSYQILQGMDYL 179

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK-LFALTSPLLTTASGTKMGKTLSGA 244
           EL + + C LQ GGSDQWGN+  G DL  R++    + AL +PL+T A GTK GKT SG 
Sbjct: 180 ELYRRHGCTLQTGGSDQWGNLTAGTDLIHRVEPEAGVHALATPLITKADGTKFGKTESGT 239

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKII 302
           +WL+ E TSPY F+Q+W N DD DV  F +  +    +EI+ + +   +      A++ +
Sbjct: 240 VWLDAERTSPYAFYQFWLNADDRDVAKFLRIFSFRSRAEIEELERQTEERPQARAAQRAL 299

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQ-HMPTI-----SISKDEVSRGMGLLTLI 356
           A E+TT+VHG E+   A  AA   F      +   PT+      + +  V     ++ L 
Sbjct: 300 AQELTTLVHGAEQCAAAEYAAKALFGQGELGELDEPTLRAALGELPRASVEELAPVVDLF 359

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            +AG A S + ARR +K     +NN  ++ E       D      + L  GKKN     +
Sbjct: 360 AEAGLAASKSAARRTVKEGGAYVNNVKVTTEDAVPSPGDLLHGRWLVLRRGKKNLAAIEV 419

Query: 417 CG 418
            G
Sbjct: 420 TG 421


>gi|329925452|ref|ZP_08280344.1| tyrosine--tRNA ligase [Paenibacillus sp. HGF5]
 gi|328939832|gb|EGG36171.1| tyrosine--tRNA ligase [Paenibacillus sp. HGF5]
          Length = 419

 Score =  479 bits (1234), Expect = e-133,   Method: Composition-based stats.
 Identities = 147/425 (34%), Positives = 217/425 (51%), Gaps = 21/425 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  R  I+Q ++   L  L ++  ++ Y G D T  S+H GHL   ++L   Q  
Sbjct: 2   NIIDELEWRDAINQQTDAEGLRELTNEKSISLYCGVDPTGDSMHIGHLIPFIMLKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+P+ L+GG T  IGDPS R   R +   +++Q N++ + G          G     M+
Sbjct: 62  GHRPVILIGGATGTIGDPSGRQTERSLQTLEQVQANVDALTGQMKKLF-VTEGDNQIRMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I  I+ LR+ G  FS+N ML+ + V SRL     +SF EF+Y ILQ+ D++ 
Sbjct: 121 NNYDWTHKINIIEFLRDYGKNFSINSMLAKDVVASRLDS--GISFTEFSYQILQSVDYLH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSGA 244
           L ++ D +LQ+GGSDQWGNI  G+DL  + + P  K F LT PL+  A GTK GKT  GA
Sbjct: 179 LYQHEDVQLQIGGSDQWGNITSGLDLIRKKEGPEAKAFGLTIPLMLKADGTKFGKTAGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKII 302
           IWL+   T+P+ F+Q+W N DD DVV + K  T L   +ID +A+    E    EA+K +
Sbjct: 239 IWLDPNKTTPFEFYQFWANTDDRDVVKYLKYFTFLTKEQIDELAEKVQSEPHKREAQKTL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGL 352
           A E+T  VHG E  E+A       F   I S          + MPT   +         +
Sbjct: 299 AEEMTRFVHGEEMLEQAKRITAALFSGDIKSLTADEIEQGFKEMPTFEAT----PETKNI 354

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           +  +V  G   S  +AR  +   AI +N   +S+   ++          I +  GKKN+ 
Sbjct: 355 VDWLVDLGIEPSKRQAREDITKGAISMNGERVSDLGHEVTADQAIGGRFIIIRKGKKNYS 414

Query: 413 ICHLC 417
           +  + 
Sbjct: 415 LVKMS 419


>gi|116492043|ref|YP_803778.1| tyrosyl-tRNA synthetase [Pediococcus pentosaceus ATCC 25745]
 gi|122266493|sp|Q03HI6|SYY_PEDPA RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|116102193|gb|ABJ67336.1| tyrosyl-tRNA synthetase [Pediococcus pentosaceus ATCC 25745]
          Length = 417

 Score =  479 bits (1234), Expect = e-133,   Method: Composition-based stats.
 Identities = 147/424 (34%), Positives = 225/424 (53%), Gaps = 23/424 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L+ RG ++Q ++   L  L  +  +  Y G D T  S+H GHL   M+L   Q+ 
Sbjct: 2   NIIDELTWRGAVNQQTDEEGLKKLTDEKKIGLYAGIDPTGDSMHIGHLIPFMVLKRFQQA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP+ L+GGGT  IGDPS +   R +   +++  N E +K     F     G  +  M+
Sbjct: 62  GHKPVILIGGGTGSIGDPSGKKSERVLQTMEQVHHNEEALKSQMVKFF----GTDNFRMV 117

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  +  +D LR+ G  F+VN ML+ + V SRL  E  +SF EF Y ILQ+ DF+ 
Sbjct: 118 NNYDWLSKMSLLDFLRDYGKLFNVNTMLAKDIVASRL--EVGISFTEFTYQILQSIDFLH 175

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKLFALTSPLLTTASGTKMGKTLSGA 244
           L KN D +LQ+GG DQWGNI  G DL  R++    K++ LT PLL  A GTK GK+  G 
Sbjct: 176 LYKNEDVQLQIGGGDQWGNITAGTDLIHRMEGQEAKVYGLTIPLLLKADGTKFGKSEGGN 235

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKII 302
           +WL+ E T+PY F+Q+W N DD DVV F K  T L   EI+R+A+      E  EA++ +
Sbjct: 236 VWLDAEKTTPYEFYQFWLNQDDRDVVKFLKYFTFLSHEEIERLAETVKTAPEKREAQRRL 295

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGL 352
           A E+T+ VHG    E+A   +   F   +            ++MP++ +   + +  + L
Sbjct: 296 AEEVTSFVHGDAAVEEAQHISAALFSGEVKDLTASEIEQGFKNMPSVDVENKKENIVLWL 355

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           +         +S  +AR  +++ AI+IN   +++   +I          + +  GKK + 
Sbjct: 356 VD---TTKIESSRRQAREDIQNGAIRINGEKVTDVNAEIDPASNFDGKFVIVRRGKKKYF 412

Query: 413 ICHL 416
           +  +
Sbjct: 413 LARV 416


>gi|94495561|ref|ZP_01302141.1| tyrosyl-tRNA synthetase [Sphingomonas sp. SKA58]
 gi|94424949|gb|EAT09970.1| tyrosyl-tRNA synthetase [Sphingomonas sp. SKA58]
          Length = 411

 Score =  479 bits (1234), Expect = e-133,   Method: Composition-based stats.
 Identities = 210/414 (50%), Positives = 281/414 (67%), Gaps = 11/414 (2%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  ++SD L +L ERG+IHQ+++ + LD L ++ VV  YIG+D TA SLH G L Q+M+L
Sbjct: 7   MSHYQSDLLRLLDERGYIHQLTDAQGLDALAARDVVPGYIGFDPTAPSLHVGSLVQIMML 66

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             +Q+ GHKPI LMGGGT  IGDPS RDE+R ++   +I EN+  IK +F  F+ +G G 
Sbjct: 67  RRMQQAGHKPIVLMGGGTGKIGDPSLRDEARSLLTVDKINENVASIKRVFERFLTFGDGP 126

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           +DA+M++N  WL +++YI  LR+IG  FSVNRMLSF+SV+ RL REQSLSFLEFNYMILQ
Sbjct: 127 SDAIMVDNADWLDALEYIPFLRDIGQHFSVNRMLSFDSVKLRLDREQSLSFLEFNYMILQ 186

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDF+EL++   CRLQMGGSDQWGNI+ GI+L  R+   ++F LTSPL+TTA G KMGKT
Sbjct: 187 AYDFLELSRRAGCRLQMGGSDQWGNIVNGIELSRRVDGTQVFGLTSPLITTADGGKMGKT 246

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
             GA+WLN +  SPY++WQ+WRN  DADV  F +  T LP+ EI R+ +L+G EIN+AKK
Sbjct: 247 AKGAVWLNADALSPYDYWQFWRNTQDADVGRFMRLFTDLPLDEIARLERLEGAEINDAKK 306

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           ++A   T M HG + A  AA  A   F+      ++PTIS+     S G+ ++      G
Sbjct: 307 VLADAATAMAHGADAATAAAETARRTFEEGASDANLPTISLG----SEGLSVVQATTGLG 362

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           FATS  E RR L   AIK+N  ++++  + +K  D       KLSFG K H + 
Sbjct: 363 FATSNKEVRRKLSEGAIKVNGVVVTDPAVLLKAGD-------KLSFGAKKHGLV 409


>gi|87200116|ref|YP_497373.1| tyrosyl-tRNA synthetase [Novosphingobium aromaticivorans DSM 12444]
 gi|97201733|sp|Q2G6I4|SYY_NOVAD RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|87135797|gb|ABD26539.1| tyrosyl-tRNA synthetase [Novosphingobium aromaticivorans DSM 12444]
          Length = 409

 Score =  479 bits (1234), Expect = e-133,   Method: Composition-based stats.
 Identities = 203/415 (48%), Positives = 279/415 (67%), Gaps = 8/415 (1%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  + S  L +LSERG+IHQ+++   LD L ++ V+  YIG+D TA SLH G + Q+MLL
Sbjct: 1   MTEYASSLLRLLSERGYIHQMTDADALDALAAKQVIPGYIGFDPTAPSLHVGSMVQIMLL 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             LQ+ GHKPI LMGGGT  IGDPSF+DE+R++M +  I  N+  IK +F  F+ +G G 
Sbjct: 61  RRLQQAGHKPIVLMGGGTGKIGDPSFKDEARKLMTNDVIAANVASIKTVFERFLTFGDGP 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           TDA+M++N  WL  ++YI  LRE+G  FSVNRMLSF+SV+ RL REQSLSFLEFNYMILQ
Sbjct: 121 TDAVMVDNADWLDRLEYIPFLREVGQHFSVNRMLSFDSVKQRLDREQSLSFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDF EL++ + CRLQMGGSDQWGNI+ GI+L  R+   ++F +T+PLLTTA G+KMGKT
Sbjct: 181 AYDFRELSQRHACRLQMGGSDQWGNIVNGIELTRRMDGVEVFGVTTPLLTTADGSKMGKT 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
            +GA+WLN++    ++FWQYWRN DD DV  F +  T LP+ EI R+  L+G EIN AK 
Sbjct: 241 AAGAVWLNEDALPAWDFWQYWRNTDDRDVGKFLRLFTDLPLDEIARLEALEGSEINAAKV 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           ++A E+T +V G E A+ A   A   F      Q +PT+S+ + E    +G++  +V  G
Sbjct: 301 VLANEVTRLVRGEEAAKAAEATAAATFAGGGLGQDLPTLSVGESE----IGIVDALVGLG 356

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           FA S  EA+R +     +++   +++E  +I      +   I++S GKK H I  
Sbjct: 357 FAASRGEAKRLVAGGGARVDGEPVTDEGFRI----LVNDKEIRVSSGKKKHGILR 407


>gi|328956502|ref|YP_004373888.1| tyrosine--tRNA ligase [Carnobacterium sp. 17-4]
 gi|328672826|gb|AEB28872.1| tyrosine--tRNA ligase [Carnobacterium sp. 17-4]
          Length = 421

 Score =  479 bits (1234), Expect = e-133,   Method: Composition-based stats.
 Identities = 147/425 (34%), Positives = 223/425 (52%), Gaps = 19/425 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  R  I+Q ++   L  L  Q  +  Y G D T  S+H GHL   M+L   Q  
Sbjct: 2   NIIDELEWRDAINQQTDEAGLKKLIDQKKIGLYCGVDPTGDSMHIGHLIPFMILKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+P+ ++GG T  IGDPS + E R +  S+++Q N +K+     +    G  +    M+
Sbjct: 62  GHRPVIVIGGATGSIGDPSGKSEERVLQTSEQVQNNSDKLSRQMENLFDAGKKEESIRMV 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I  +D LR IG  F+VN MLS + V SRL  E  +SF EF Y ILQ+ DF+ 
Sbjct: 122 NNLDWTKEISLLDFLRNIGKSFNVNTMLSKDIVASRL--ETGISFTEFTYQILQSIDFLH 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKLFALTSPLLTTASGTKMGKTLSGA 244
           L ++ D +LQ+GG+DQWGNI  G++   + +    + + LT PL+  A GTK GKT  GA
Sbjct: 180 LYRHEDVQLQIGGADQWGNITAGLEYIRKQEGSEAEAYGLTIPLMLKADGTKFGKTAGGA 239

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKII 302
           IWL+ E T+PY F+Q+W N DD DVV + K  T L   EI+ + +    E    EA+K +
Sbjct: 240 IWLDPEKTTPYEFYQFWLNQDDRDVVKYLKYFTFLTKEEIEALGEKIAAEPHKREAQKTL 299

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGL 352
           A+E+T  VHG +  + A       F   + S          ++MPT   SK+E +    L
Sbjct: 300 ASEMTLFVHGEQALKDAEKITAALFSGDVKSLTADQIEEGFKNMPTFESSKEERNIVEWL 359

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           + ++   G   S  +AR  + + A+ +N   I++ +  +  ++      I +  GKK + 
Sbjct: 360 VDVV---GIEPSRRQAREDINNGALSMNGEKITDVEAIVTPENSFDERFILIRKGKKKYF 416

Query: 413 ICHLC 417
           +  L 
Sbjct: 417 LIKLV 421


>gi|323485671|ref|ZP_08091009.1| hypothetical protein HMPREF9474_02760 [Clostridium symbiosum
           WAL-14163]
 gi|323401021|gb|EGA93381.1| hypothetical protein HMPREF9474_02760 [Clostridium symbiosum
           WAL-14163]
          Length = 411

 Score =  479 bits (1233), Expect = e-133,   Method: Composition-based stats.
 Identities = 174/410 (42%), Positives = 252/410 (61%), Gaps = 7/410 (1%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG I Q++N  E+  + ++G  T YIG+D TA SLH GH   L L+  LQ  G
Sbjct: 3   IYEELVARGLIAQVTNEEEIGNMINEGKATFYIGFDPTADSLHVGHFMALCLMKRLQMAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           +KPI+L+GGGT +IGDPS R++ R+MM  + IQ N +  K   S FI +  GK  A+M+N
Sbjct: 63  NKPIALLGGGTGMIGDPSGRNDLRQMMTVETIQHNCDCFKQQMSRFIDFSEGK--AMMVN 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  + Y++LLRE+G  FSVNRML+ E  + R+  E+ L+FLEFNYMI+Q+YDF  L
Sbjct: 121 NAEWLMGLNYVELLREVGPHFSVNRMLAAECYKQRM--EKGLTFLEFNYMIMQSYDFYML 178

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            + Y C +Q GG DQW N++ G +L  R       A+T  LL  + G KMGKT SGA+WL
Sbjct: 179 FQKYGCNMQFGGDDQWSNMLGGTELIRRKLGKDAHAMTITLLLNSEGKKMGKTQSGAVWL 238

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           +   TSP+ F+QYWRNI DADV+   + LT LP+ +I+ M K +G ++N AK+I+A E+T
Sbjct: 239 DPNKTSPFEFYQYWRNIADADVLKCLRMLTFLPIEQINEMDKWEGSQLNTAKEILAFELT 298

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVS-RGMGLLTLIVKAGFATSTN 366
            +VHG  EAEKA  A+   F    ++  MPT  +++++ +   + +LT++ K+G A S +
Sbjct: 299 NLVHGEAEAEKAKEASRALFTSG-NAADMPTAELTEEDFNGDEIDILTILQKSGLAPSRS 357

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           EARR+++   + ++   + + K           G I +  GKKN     L
Sbjct: 358 EARRNVEQGGVAVDGEAVKDSKAVFTKAQLSGDG-IVVKRGKKNFKKVIL 406


>gi|326336235|ref|ZP_08202407.1| tyrosine--tRNA ligase [Capnocytophaga sp. oral taxon 338 str.
           F0234]
 gi|325691744|gb|EGD33711.1| tyrosine--tRNA ligase [Capnocytophaga sp. oral taxon 338 str.
           F0234]
          Length = 432

 Score =  479 bits (1233), Expect = e-133,   Method: Composition-based stats.
 Identities = 150/432 (34%), Positives = 230/432 (53%), Gaps = 24/432 (5%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
            +F+  L  RG I  I    E      +G+  AY+G D TA SLH GHL  +M+L   Q 
Sbjct: 2   KNFVEELRWRGMIQDIMPETE--EHLLEGLRAAYVGIDPTADSLHIGHLVGVMMLRHFQD 59

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG-TGKTDAL 124
            GHKP +++GG T +IGDPS +   R ++  + +  NIE IK   + F+ +  T    A 
Sbjct: 60  CGHKPYAVIGGATGMIGDPSGKSAERNLLTKETLAHNIEGIKKQLAKFLDFESTAPNRAE 119

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL---KREQSLSFLEFNYMILQA 181
           ++NN  W   + ++  +R+IG   +VN M++ +SV+ R    +    +SF EF+Y +LQ 
Sbjct: 120 LVNNYDWTKDVSFLSFIRDIGKHITVNYMMAKDSVKKRFDPNENTDGMSFTEFSYQLLQG 179

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
           +D++ L +     LQMGGSDQWGNI  G +L  R  + K +ALT PL+T A GTK GK+ 
Sbjct: 180 FDYLHLFQEKGVTLQMGGSDQWGNITTGTELIRRKVSGKAYALTCPLITKADGTKFGKSE 239

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AK 299
            G +WL+ E TSPY F+QYW N  D D   + K  T LP  EI+ +  +  +  ++   +
Sbjct: 240 GGNVWLDPEKTSPYKFYQYWINTSDVDAERYIKIFTMLPKGEIETLIMVHREAPHQRILQ 299

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDE 345
             +A E+T +VHG+EE E A  A+   F  +                   +P   IS  +
Sbjct: 300 SKLAEELTILVHGKEELENAIRASQILFGNTTSEDLKKLDSQTLLEIFDGVPQAEISLTD 359

Query: 346 VSRGMGLLTLI-VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           + +G+ ++  +  K GF  S +EARR L  N+I +N   ++ E   +  +D  +   I L
Sbjct: 360 LKKGLDMIGALSAKTGFIKSNSEARRALGENSISVNKEKVT-EDYSLSEKDLLNNQFILL 418

Query: 405 SFGKKNHIICHL 416
             GKKN+ +  +
Sbjct: 419 QRGKKNYFLIRI 430


>gi|238852821|ref|ZP_04643226.1| tyrosine--tRNA ligase [Lactobacillus gasseri 202-4]
 gi|238834515|gb|EEQ26747.1| tyrosine--tRNA ligase [Lactobacillus gasseri 202-4]
          Length = 420

 Score =  479 bits (1233), Expect = e-133,   Method: Composition-based stats.
 Identities = 151/423 (35%), Positives = 219/423 (51%), Gaps = 17/423 (4%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQ-GVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           K D L  L  RG I+Q ++   L    ++   +  Y G D T  SLH GHL   M+L   
Sbjct: 3   KFDILEDLKWRGAINQETDEEGLRKYLAEHDDLALYCGTDPTGDSLHIGHLIPFMILKRF 62

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q  G+ P+ L+GGGT  IGDPS R   R +  +++++ N EK+            G  + 
Sbjct: 63  QMAGYHPVILIGGGTGSIGDPSGRKTERVLQTAEQVKHNEEKLTTQMKKLF----GTENF 118

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            + NN  WL  +  ID LR+ G FF VN M++ + V SRL  E  +SF EF+Y ILQA D
Sbjct: 119 EIKNNAEWLGKLNLIDFLRDYGKFFQVNNMINKDVVASRL--ENGISFTEFSYQILQAID 176

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTL 241
           F  L K+   +LQ+GGSDQWGNI  GIDL  +L+      F LT PL+  A GTK GK+ 
Sbjct: 177 FYHLNKDNGVQLQIGGSDQWGNITAGIDLIHKLEGQERPAFGLTIPLMLKADGTKFGKSA 236

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAK 299
            GA+WL+ E TSPY F+Q+W N DD DVV + K  T L   EI+ +A+   KE     A+
Sbjct: 237 GGAVWLDPEKTSPYEFYQFWINQDDRDVVKYLKYFTFLSREEIEDLAEKTEKEPWKRAAQ 296

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRGMGLL 353
           K +A E+T  VHG E  ++A       F  ++ S  +P I        S +       ++
Sbjct: 297 KRLAEEVTKFVHGEEGLKEAQMITEALFSGNVKSLSVPQIEQALKNAPSAEATHEAKNIV 356

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
             +V+     S  +AR  +K+ AI +N    ++    I+  +      + +  GK+ + +
Sbjct: 357 EFLVETKIEPSKRQAREDVKNGAIYVNGERQNDIDFIIEPDNDFDGKYVIIRKGKREYTL 416

Query: 414 CHL 416
             +
Sbjct: 417 VKI 419


>gi|325285904|ref|YP_004261694.1| Tyrosyl-tRNA synthetase [Cellulophaga lytica DSM 7489]
 gi|324321358|gb|ADY28823.1| Tyrosyl-tRNA synthetase [Cellulophaga lytica DSM 7489]
          Length = 431

 Score =  479 bits (1233), Expect = e-133,   Method: Composition-based stats.
 Identities = 153/431 (35%), Positives = 229/431 (53%), Gaps = 23/431 (5%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+F++ L  RG IH +    E      + +  AY+G D TA SLH GHL  +M+L   Q 
Sbjct: 3   SNFVAELKWRGMIHDVMPETE--EHLLEQMRAAYVGIDPTADSLHIGHLVSVMMLRHFQL 60

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY-GTGKTDAL 124
            GHKP +L+GG T +IGDPS +   R ++  + ++ N   IK   S F+ +    +  A+
Sbjct: 61  AGHKPYALIGGATGMIGDPSGKSAERNLLDEKTLRHNQNAIKDQLSRFLDFKSDEENAAV 120

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQAY 182
           ++NN  W+    +++ +R++G   +VN M++ +SV+ RL  E  + +SF EF Y ++Q Y
Sbjct: 121 LVNNYDWMKEFSFLEFIRDVGKHITVNYMMAKDSVKKRLTSEAKEGMSFTEFTYQLVQGY 180

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DF  L K ++C LQMGGSDQWGNI  G ++  R+   K +ALT PL+T A GTK GKT  
Sbjct: 181 DFFHLFKEHNCTLQMGGSDQWGNITTGTEMIRRIGGGKGYALTCPLITKADGTKFGKTEG 240

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKK 300
           G IWL+ E TSPY F+QYW N  D D   F K  T L   EID +         +   +K
Sbjct: 241 GNIWLDAERTSPYKFYQYWLNTSDEDAEKFIKIFTFLTKEEIDALIAEHKEAPHMRALQK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDEV 346
            +A EIT  VH +++ + A  A+   F  S                 + +P   ++K ++
Sbjct: 301 KLAEEITISVHSKQDLDNAIKASNILFGKSTSDDLKTLDEKTFLDIFEGVPQAEVTKTDI 360

Query: 347 SRGMGLL-TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLS 405
             G+ ++  L  K  F  S   ARR LK N+I +N   +  E   I  +D  +   + L 
Sbjct: 361 EEGLDMIGALAAKTQFLDSNGAARRELKQNSISVNKEKVK-EDYVITSKDLINNKFVLLQ 419

Query: 406 FGKKNHIICHL 416
            GKKN+ +  +
Sbjct: 420 RGKKNYFVLVV 430


>gi|254557421|ref|YP_003063838.1| tyrosine--tRNA ligase [Lactobacillus plantarum JDM1]
 gi|254046348|gb|ACT63141.1| tyrosine--tRNA ligase [Lactobacillus plantarum JDM1]
          Length = 418

 Score =  479 bits (1233), Expect = e-133,   Method: Composition-based stats.
 Identities = 148/424 (34%), Positives = 222/424 (52%), Gaps = 22/424 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG I+Q ++   L  L     V+ Y G D T  S+H GHL   M+L   Q  
Sbjct: 2   NIIDDLKWRGAINQQTDEAGLKELTENQSVSLYCGIDPTGDSMHIGHLIPFMILKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P  ++GGGT  IGDPS ++  R++    +++ N + +         +     +  ++
Sbjct: 62  GHHPYVVVGGGTGAIGDPSGKNSERKLQTMDQVKHNQDGLSAQMYKLFGHDE---NFSIV 118

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  I  +D LR+ G  FSVN ML+ E V SRL  E  +S+ EF Y ILQ+ DF+ 
Sbjct: 119 NNYDWLSKISLLDFLRDYGKLFSVNTMLNKEVVASRL--EVGISYTEFTYQILQSVDFLH 176

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKLFALTSPLLTTASGTKMGKTLSGA 244
           L +    +LQ+GG+DQWGNI  G DL  RL+    K + LT PLL  A GTK GKT  GA
Sbjct: 177 LYRAEHVQLQIGGADQWGNITAGTDLIHRLEGNDAKAYGLTIPLLLKADGTKFGKTAGGA 236

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKII 302
           +WLN E TSPY F+Q+W N DD DVV + K  T L   EIDR+A+      E  EA++ +
Sbjct: 237 VWLNPERTSPYEFYQFWINQDDRDVVKYLKYFTFLSHEEIDRLAETVKTAPEKREAQRRL 296

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGL 352
           A E+T  VHG++   +A       F   + S          + +P+  +S ++ +  + L
Sbjct: 297 AEEVTEFVHGKQAVVEAENITKALFTGDVQSLTADEIEQGFKGVPSADVSAEKQNIVLWL 356

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           +       F  S  +AR  +K+ AI+IN   +++ + +I      +   + +  GKK + 
Sbjct: 357 VD---ATKFEPSRRQAREDIKNGAIRINGEKVTDVEAEIDPSAAFNGKFVIVRRGKKRYF 413

Query: 413 ICHL 416
           +  +
Sbjct: 414 LARV 417


>gi|254386396|ref|ZP_05001701.1| tyrosyl-tRNA synthetase [Streptomyces sp. Mg1]
 gi|194345246|gb|EDX26212.1| tyrosyl-tRNA synthetase [Streptomyces sp. Mg1]
          Length = 421

 Score =  479 bits (1233), Expect = e-133,   Method: Composition-based stats.
 Identities = 140/422 (33%), Positives = 229/422 (54%), Gaps = 11/422 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +D +  L  RG     ++   L    + G VT Y G+D TA+SLH GHL Q++ +  LQ+
Sbjct: 2   TDIVDELKWRGLFALSTDEEALRKAFADGPVTFYCGFDPTAASLHVGHLVQVLTVRRLQQ 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+P++L+GG T  IGDP      R +   + +   + +++     F+ +  G+  A+M
Sbjct: 62  AGHRPLALVGGATGQIGDPRP-TAERTLNDPETVANWVNRLRSQIEPFLSF-EGENAAVM 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  W   +  I+ LR+IG  F VN+ML+ +SV  RL+ +Q +S+ EF+Y +LQ  DF+
Sbjct: 120 VNNLDWTAGLSAIEFLRDIGKHFRVNKMLTKDSVARRLESDQGISYTEFSYQLLQGMDFL 179

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASGTKMGKTLSGA 244
           EL + Y C LQ GGSDQWGN+  G+DL  RL+   K+ A+ +PL+  A GTK GK+ SGA
Sbjct: 180 ELYRRYGCTLQQGGSDQWGNLTAGLDLIHRLEPHAKVHAMATPLMVKADGTKFGKSESGA 239

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKII 302
           +WL+ EMT+PY F+Q+W N+DD D+ ++ + L+     E++ +     +      A++ +
Sbjct: 240 VWLDPEMTTPYAFYQFWLNVDDRDISTYMRILSFKTREELEELEAQTAERPQARAAQRAL 299

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQ------HMPTISISKDEVSRGMGLLTLI 356
           A E+TT+VHG ++      A+   F     ++            +   +V+    ++ L+
Sbjct: 300 AEELTTLVHGADQCAAVIAASKALFGQGDLAELDEATLAAALSELPHAQVAEAGPVVDLL 359

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            + G   S + ARR +K     +NN  ++ E      +D      + L  GKKN     +
Sbjct: 360 AETGLVASKSAARRTVKEGGAYVNNVKVAAEDAVPAKEDLLHGRWLVLRRGKKNLAAVEV 419

Query: 417 CG 418
            G
Sbjct: 420 TG 421


>gi|260577967|ref|ZP_05845892.1| tyrosine--tRNA ligase [Corynebacterium jeikeium ATCC 43734]
 gi|258603893|gb|EEW17145.1| tyrosine--tRNA ligase [Corynebacterium jeikeium ATCC 43734]
          Length = 428

 Score =  479 bits (1233), Expect = e-133,   Method: Composition-based stats.
 Identities = 151/428 (35%), Positives = 231/428 (53%), Gaps = 16/428 (3%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M   K + +  L  RG I+Q ++   L    +Q  +T Y G+D T SSLHAGHL  L++L
Sbjct: 1   MSDNK-NIIDELQWRGLINQSTDLEALKEA-TQNPITLYCGFDPTGSSLHAGHLVPLIML 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG- 119
              Q+ GH+PI+L GG T +IGDP    E R M+  ++I EN+  IK    +F+ +    
Sbjct: 59  KRFQQFGHRPITLAGGATGMIGDPRDVGE-RSMLTEEQIGENMVAIKKQLEAFVDFAEDS 117

Query: 120 --KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYM 177
              + A+M+NN  W+  +  I+ LR++G  FS+N ML  ++V+ RL+ +  +S+ EF+YM
Sbjct: 118 DVNSPAVMVNNADWISQMNVIEYLRDVGKNFSLNTMLDRDTVKRRLESD-GISYTEFSYM 176

Query: 178 ILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
           +LQA D+V L   +DC LQ+GG DQWGNI+ G+DL  R+   K+  LT PL+T A G K 
Sbjct: 177 LLQANDYVHLHNEFDCVLQIGGGDQWGNIVSGVDLNRRVNGAKVHGLTVPLVTDAEGNKF 236

Query: 238 GKTLSGA-IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI- 295
           GK+  G  +WL+ ++TSPY+++QY+ N  D  V+ + +  T L   EI  + +   +E  
Sbjct: 237 GKSTGGGKLWLDPQLTSPYSWYQYFINAGDTVVIDYLRWFTFLSQEEIAELERKVAEEPY 296

Query: 296 -NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQ-HMPTI-----SISKDEVSR 348
             EA++++A E+TT+VHG    E    AA   F  +       PT+          EV  
Sbjct: 297 KREAQRVLAREMTTLVHGAAATEAVELAAQALFGKAELQDLDEPTLASALQETEVAEVGA 356

Query: 349 GMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGK 408
              +L L+V++G   S   ARR +      +NN  I + +      D      + L  GK
Sbjct: 357 DATILDLLVESGLEKSKGAARRTVGEGGAYVNNQRIEDIEWSPSADDLLHGSWLVLRKGK 416

Query: 409 KNHIICHL 416
           K      +
Sbjct: 417 KRFAGARV 424


>gi|229175765|ref|ZP_04303271.1| Tyrosyl-tRNA synthetase [Bacillus cereus MM3]
 gi|228607716|gb|EEK65032.1| Tyrosyl-tRNA synthetase [Bacillus cereus MM3]
          Length = 420

 Score =  479 bits (1233), Expect = e-133,   Method: Composition-based stats.
 Identities = 149/424 (35%), Positives = 221/424 (52%), Gaps = 21/424 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG ++Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  
Sbjct: 2   NIIDELEWRGAVNQQTDEEGLRKLVEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P+ L+GG T  IGDPS R   R++   + +Q N++ +         +G G ++  M+
Sbjct: 62  GHHPVILIGGATGTIGDPSGRQSERQLQTLEVVQHNVDALTAQMKKLFDFG-GNSEVKMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I  I+ LR+ G  FS+N ML+ + V SRL  +  +SF EF Y ILQA DF  
Sbjct: 121 NNYDWTHEINIIEFLRDYGKNFSINSMLAKDIVASRL--DTGISFTEFTYQILQAMDFHH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKLFALTSPLLTTASGTKMGKTLSGA 244
           L    D +LQ+GGSDQWGNI  G+DL  +L+    K+F LT PLL  + GTK GK+  GA
Sbjct: 179 LYTKEDVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSAGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKII 302
           +WL+ E T+P+ F+Q+W N DD DVV + K  T L    ID +A     E    EA+K++
Sbjct: 239 VWLDPEKTTPFEFYQFWVNTDDRDVVKYLKYFTFLTKERIDELAVKVETEPHRREAQKVL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGL 352
           A E+T  VHG E   +A       F   I S          + MPT   SK+       +
Sbjct: 299 AEEMTKFVHGAEALLQAEKITAALFSGDIKSLTADEIEQGFKEMPTFQSSKET----KNI 354

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           +  +V  G   S  +AR  + + AI +N   +++    + +++      I +  GKKN+ 
Sbjct: 355 VEWLVDLGIEPSRRQAREDINNGAISMNGEKVTDVDTDVTVENSFDGRFIIIRKGKKNYS 414

Query: 413 ICHL 416
           +  L
Sbjct: 415 LVKL 418


>gi|28379288|ref|NP_786180.1| tyrosine--tRNA ligase [Lactobacillus plantarum WCFS1]
 gi|300766749|ref|ZP_07076664.1| tyrosine--tRNA ligase [Lactobacillus plantarum subsp. plantarum
           ATCC 14917]
 gi|308181488|ref|YP_003925616.1| tyrosine--tRNA ligase [Lactobacillus plantarum subsp. plantarum
           ST-III]
 gi|81630766|sp|Q88TV5|SYY_LACPL RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|28272127|emb|CAD65031.1| tyrosine--tRNA ligase [Lactobacillus plantarum WCFS1]
 gi|300495657|gb|EFK30810.1| tyrosine--tRNA ligase [Lactobacillus plantarum subsp. plantarum
           ATCC 14917]
 gi|308046979|gb|ADN99522.1| tyrosine--tRNA ligase [Lactobacillus plantarum subsp. plantarum
           ST-III]
          Length = 418

 Score =  479 bits (1233), Expect = e-133,   Method: Composition-based stats.
 Identities = 149/424 (35%), Positives = 223/424 (52%), Gaps = 22/424 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG I+Q ++   L  L     V+ Y G D T  S+H GHL   M+L   Q  
Sbjct: 2   NIIDDLKWRGAINQQTDEAGLKELTENQSVSLYCGIDPTGDSMHIGHLIPFMILKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P  ++GGGT  IGDPS ++  R++    +++ N + +         +     +  ++
Sbjct: 62  GHHPYVVVGGGTGAIGDPSGKNSERKLQTMDQVKHNQDGLSAQMYKLFGHDE---NFSIV 118

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  I  +D LR+ G  FSVN ML+ E V SRL  E  +S+ EF Y ILQ+ DF+ 
Sbjct: 119 NNYDWLSKISLLDFLRDYGKLFSVNTMLNKEVVASRL--EVGISYTEFTYQILQSVDFLH 176

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKLFALTSPLLTTASGTKMGKTLSGA 244
           L +    +LQ+GG+DQWGNI  G DL  RL+    K + LT PLL  A GTK GKT  GA
Sbjct: 177 LYRAEHVQLQIGGADQWGNITAGTDLIHRLEGNDAKAYGLTIPLLLKADGTKFGKTAGGA 236

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKII 302
           +WLN E TSPY F+Q+W N DD DVV + K  T L   EIDR+A+      E  EA++ +
Sbjct: 237 VWLNPERTSPYEFYQFWINQDDRDVVKYLKYFTFLSHEEIDRLAETVKTAPEKREAQRRL 296

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGL 352
           A E+T  VHG++   +A       F   + S          + +P+  +S ++ +  + L
Sbjct: 297 AEEVTEFVHGKQAVVEAENITKALFTGDVQSLTADEIEQGFKGVPSADVSAEKQNIVLWL 356

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           +       F  S  +AR  +K+ AI+IN   +++ + +I      +   + +  GKK + 
Sbjct: 357 VD---ATKFEPSRRQAREDIKNGAIRINGEKVTDVEAEIDPSAAFNGKFVIVRRGKKRYF 413

Query: 413 ICHL 416
           + H+
Sbjct: 414 LAHV 417


>gi|285808375|gb|ADC35903.1| putative tyrosyl-tRNA synthetase [uncultured bacterium 59]
          Length = 427

 Score =  478 bits (1232), Expect = e-133,   Method: Composition-based stats.
 Identities = 161/425 (37%), Positives = 244/425 (57%), Gaps = 15/425 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           ++     + RG ++  +    L  L ++  VTAYIG+D TASSLH G L  +M L  LQ+
Sbjct: 5   TNVYEEFTWRGMVYDGT--EGLSELFARERVTAYIGFDPTASSLHVGSLLPVMALARLQR 62

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH PI+++GGGT +IGDPS + + R ++  ++I EN+  IK   S F+ +  G   A +
Sbjct: 63  FGHAPIAIVGGGTGMIGDPSGKAQERLLLTREQIDENVSGIKQQLSRFLDFDRGDNPARL 122

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  WL +   +  LR+ G +F+VN ML  ESV  RL+ E  +SF EF+Y++LQA DFV
Sbjct: 123 VNNSDWLAAFDLLGFLRDTGKYFTVNYMLQKESVNRRLESEDGISFTEFSYLLLQARDFV 182

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           EL   Y C +Q+GGSDQWGNI  GIDL  +L+  K   L  PL+TTASG K GKT +G I
Sbjct: 183 ELFDRYGCTMQLGGSDQWGNITAGIDLIRKLRAQKAHGLVMPLVTTASGVKFGKTEAGTI 242

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKIIA 303
           WL+   TSP+ F+Q+W N DD DVV++ K  T L    ID    A     +  EA++++A
Sbjct: 243 WLDAARTSPFKFYQFWLNTDDRDVVTYLKFFTFLERPAIDALDAATKDAPQKREAQRVLA 302

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVS-RGMGL 352
            E TT+VHG ++  +A  A+   F   I +          + +P   +S D+ +  G+G+
Sbjct: 303 REATTLVHGADQVTRAEHASTMLFGEDIMALDADDVLAVFEDVPATELSADDFAGDGIGM 362

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           + L+ +   A S ++ARR ++S  + +NN  +S+ + ++            L  G+K + 
Sbjct: 363 VDLVARVQLAASKSDARRLVQSGGVYVNNRRVSDVQARLTRDQAIGGRVFVLRKGQKQNH 422

Query: 413 ICHLC 417
           +  L 
Sbjct: 423 LVRLT 427


>gi|149371964|ref|ZP_01891283.1| tyrosyl-tRNA synthetase [unidentified eubacterium SCB49]
 gi|149355104|gb|EDM43665.1| tyrosyl-tRNA synthetase [unidentified eubacterium SCB49]
          Length = 430

 Score =  478 bits (1232), Expect = e-133,   Method: Composition-based stats.
 Identities = 151/431 (35%), Positives = 236/431 (54%), Gaps = 23/431 (5%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
            +F+  L  RG +H +    E  +L  + +  AY+G+D TA SLH G+L  +MLL + Q+
Sbjct: 2   KNFVEELQWRGMVHDVMPDTETHLL--EQMRAAYVGFDPTADSLHIGNLVPIMLLSFFQR 59

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK-TDAL 124
           +GHKP++L+GG T +IGDPS +   R  +  + ++ N   ++   S F+ + +G   +AL
Sbjct: 60  SGHKPVALVGGATGMIGDPSGKSNERNFLDEKTLRHNQACVRKQLSQFLDFSSGAANEAL 119

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQAY 182
           ++NN  W+    ++D +R++G   +VN M++ +SV+SR   E    LSF EF Y ++Q Y
Sbjct: 120 LVNNYDWMKEFSFLDFIRDVGKHITVNYMMAKDSVKSRFSGENADGLSFTEFTYQLVQGY 179

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DF+ L KN +  LQMGGSDQWGNI  G +L  R+   K +ALT PL+T + G+K GK+  
Sbjct: 180 DFLHLFKNQNITLQMGGSDQWGNITTGTELIRRIGGGKGYALTCPLITKSDGSKFGKSEG 239

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKK 300
           G +WL+ + TSPY F+QYW N  D D   + K  T L    ID   ++  +       +K
Sbjct: 240 GNVWLDPKKTSPYKFYQYWLNTSDEDAEKYIKIFTFLDKETIDALVVSHREAPHQRALQK 299

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDEV 346
            +A E+TT VH +E  E A  A+   F  S                 + +P   +S+ ++
Sbjct: 300 RLAQEVTTTVHSQEAYETAVAASEILFGKSTSEDLKKIDADTFLDIFEGVPQAEVSRQKI 359

Query: 347 SRGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLS 405
           + G+ ++  + +  GF  S  EARR LK N+I +N   +  E   I   D  +   + L 
Sbjct: 360 TDGLDIIGGLAEQTGFLKSNGEARRALKENSISVNKEKVK-EGYSISEADLLNDRFVLLQ 418

Query: 406 FGKKNHIICHL 416
            GKKN+ I  +
Sbjct: 419 RGKKNYFIISV 429


>gi|325067200|ref|ZP_08125873.1| tyrosyl-tRNA synthetase [Actinomyces oris K20]
          Length = 426

 Score =  478 bits (1232), Expect = e-133,   Method: Composition-based stats.
 Identities = 143/417 (34%), Positives = 229/417 (54%), Gaps = 11/417 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +D L  L  RG I Q ++   L    S G VT Y G+D TA SLH GHL  + ++  LQ 
Sbjct: 8   TDILDELQWRGLIAQHTDIDALRAALSDGAVTFYCGFDPTAPSLHHGHLVAVKVMRHLQL 67

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+P++L+GG T +IGDP  + E R +     +      ++    + + + +G   A +
Sbjct: 68  AGHRPLALVGGATGLIGDPRAKGE-RSLNTKDVVAGWAASLQEQLENLLDF-SGDNPAQI 125

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  W  ++  ID LR++G  F +  MLS + V  RL  E+ +S+ EF+Y +LQA D++
Sbjct: 126 VNNLDWTQAMSAIDFLRDLGKHFRMGTMLSKDIVARRLASEEGISYTEFSYQVLQANDYL 185

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           EL + Y C L++GG+DQWGN++ G+DL  +++   +  +T+PL+T A GTK GK+  GAI
Sbjct: 186 ELYRRYGCTLEVGGNDQWGNLVGGMDLIHKVEGASVHVMTNPLITKADGTKFGKSEGGAI 245

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIA 303
           WLN EM SPY F+Q+W  +DDADVV F K  T L   EI+R+  +  +     EA++++A
Sbjct: 246 WLNPEMLSPYAFYQFWLQVDDADVVRFLKVFTFLEPEEIERLEAVTAENPKAREAQRVLA 305

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQH------MPTISISKDEVSRG-MGLLTLI 356
            E+ T VHG +   +A  A    +     +          T  ++  +V+ G   ++ L+
Sbjct: 306 HEVCTWVHGADATAQAEAATSALWGRGDLADVDEATILAATADLASGDVAVGQTTIVDLL 365

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
           V  G     N AR+ +      INN  +++E   I  +   + G + +  G++N  +
Sbjct: 366 VGTGLERGRNAARKTIAGGGAYINNVKVADETAVIGPEHLLAGGVVLVRKGRRNLAV 422


>gi|295398237|ref|ZP_06808283.1| tyrosine--tRNA ligase [Aerococcus viridans ATCC 11563]
 gi|294973587|gb|EFG49368.1| tyrosine--tRNA ligase [Aerococcus viridans ATCC 11563]
          Length = 421

 Score =  478 bits (1232), Expect = e-133,   Method: Composition-based stats.
 Identities = 152/426 (35%), Positives = 220/426 (51%), Gaps = 21/426 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG I+Q ++   L        ++ Y G D T  SLH GHL   M+L   Q  
Sbjct: 2   NIIEELEWRGAINQQTDEDGLKAYIKDNKISLYCGVDPTGDSLHIGHLIPFMVLKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+P+ L+GG T  IGDPS + E R +   ++++EN  K+     +         D  M+
Sbjct: 62  GHRPVILIGGATGSIGDPSGKSEERNLQSMEQVEENARKLASQMENLF-LKEKDADFRMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W  ++  +D LR IG  F+VN M+  + V SRL  E  +SF EF+Y ILQ+ DF+ 
Sbjct: 121 NNYDWTKNLTLLDFLRNIGKRFNVNTMIKKDIVASRL--ETGISFTEFSYQILQSMDFLH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKLFALTSPLLTTASGTKMGKTLSGA 244
           L +N D RLQ+GG+DQWGNI  G++L  +      + F LT PL+  + GTK GKT  GA
Sbjct: 179 LFENEDVRLQIGGADQWGNITSGLELIRKEAGADAEAFGLTIPLMLKSDGTKFGKTAGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKII 302
           IWL+ E TSPY F+Q+W N +DADVV + K  T L   EID + +      E  EA++ +
Sbjct: 239 IWLDPEKTSPYEFYQFWLNQNDADVVKYLKYFTFLNKEEIDALEEKVATQPEKREAQRRL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGL 352
           A E+TT VHG+   + A T     F  +I             +MP  ++ K     G  L
Sbjct: 299 AEEMTTFVHGQTGLQDAQTITEALFSGNIQDLSAKQIEQGFGNMPGSTMPK----EGNNL 354

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
              +V AG   S  ++R  + + AI IN   + +   +I   D      I +  GKK + 
Sbjct: 355 AVWLVDAGVEGSRRQSREDINNGAIYINGQRLQDVDYEISAADAIEGKYIVVRRGKKKYF 414

Query: 413 ICHLCG 418
           +  + G
Sbjct: 415 LITIEG 420


>gi|324329009|gb|ADY24269.1| tyrosyl-tRNA synthetase [Bacillus thuringiensis serovar finitimus
           YBT-020]
          Length = 419

 Score =  478 bits (1232), Expect = e-133,   Method: Composition-based stats.
 Identities = 146/420 (34%), Positives = 216/420 (51%), Gaps = 13/420 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG I+Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  
Sbjct: 2   NIIDELEWRGAINQQTDEEGLRKLVEEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P+ L+GG T  IGDPS R   R++   + +Q N++ +         +G G ++  M+
Sbjct: 62  GHHPVILIGGATGTIGDPSGRQSERQLQTLEVVQHNVDALTAQMKKLFDFG-GNSEVKMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I  I+ LR+ G  FS+N ML+ + V SRL  +  +SF EF Y ILQA DF  
Sbjct: 121 NNYDWTHEINIIEFLRDYGKNFSINSMLAKDIVASRL--DTGISFTEFTYQILQAMDFHH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKLFALTSPLLTTASGTKMGKTLSGA 244
           L    D +LQ+GGSDQWGNI  G+DL  +L+    K+F LT PLL  + GTK GK+  GA
Sbjct: 179 LYTKEDVQLQIGGSDQWGNITSGLDLIRKLEGHEAKVFGLTIPLLLKSDGTKFGKSAGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA--KLQGKEINEAKKII 302
           +WL+ E T+P+ F+Q+W N DD DVV + K  T L    ID +A          EA+K++
Sbjct: 239 VWLDSEKTTPFEFYQFWVNTDDRDVVKYLKYFTFLTKERIDELAVKVETEPHKREAQKVL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVS------RGMGLLTLI 356
           A E+T  VHG E   +A       F   I S     I     E+           ++  +
Sbjct: 299 AEEMTKFVHGEEALLQAVKITAALFSGDIKSLTADEIEQGFKEMPTFQSSKETKNIVEWL 358

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V  G   S  +AR  + + AI +N   +++    + +++      I +  GKKN+ +  L
Sbjct: 359 VDLGIEPSRRQAREDINNGAISMNGEKVTDVDTDVTVENSFDGRFIIIRKGKKNYSLVKL 418


>gi|59800530|ref|YP_207242.1| putative tyrosyl-tRNA synthase [Neisseria gonorrhoeae FA 1090]
 gi|194097676|ref|YP_002000716.1| putative tyrosyl-tRNA synthase [Neisseria gonorrhoeae NCCP11945]
 gi|240013380|ref|ZP_04720293.1| putative tyrosyl-tRNA synthase [Neisseria gonorrhoeae DGI18]
 gi|240015823|ref|ZP_04722363.1| putative tyrosyl-tRNA synthase [Neisseria gonorrhoeae FA6140]
 gi|240112169|ref|ZP_04726659.1| putative tyrosyl-tRNA synthase [Neisseria gonorrhoeae MS11]
 gi|240114915|ref|ZP_04728977.1| putative tyrosyl-tRNA synthase [Neisseria gonorrhoeae PID18]
 gi|240120452|ref|ZP_04733414.1| putative tyrosyl-tRNA synthase [Neisseria gonorrhoeae PID24-1]
 gi|240122752|ref|ZP_04735708.1| putative tyrosyl-tRNA synthase [Neisseria gonorrhoeae PID332]
 gi|240127455|ref|ZP_04740116.1| putative tyrosyl-tRNA synthase [Neisseria gonorrhoeae SK-93-1035]
 gi|254492974|ref|ZP_05106145.1| tyrosyl-tRNA synthetase [Neisseria gonorrhoeae 1291]
 gi|260441270|ref|ZP_05795086.1| putative tyrosyl-tRNA synthase [Neisseria gonorrhoeae DGI2]
 gi|268598226|ref|ZP_06132393.1| tyrosyl-tRNA synthetase [Neisseria gonorrhoeae MS11]
 gi|268600572|ref|ZP_06134739.1| tyrosyl-tRNA synthetase [Neisseria gonorrhoeae PID18]
 gi|268681354|ref|ZP_06148216.1| tyrosyl-tRNA synthetase [Neisseria gonorrhoeae PID332]
 gi|268685831|ref|ZP_06152693.1| tyrosyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035]
 gi|291044618|ref|ZP_06570327.1| tyrosyl-tRNA synthetase [Neisseria gonorrhoeae DGI2]
 gi|293397737|ref|ZP_06641943.1| tyrosyl-tRNA synthetase [Neisseria gonorrhoeae F62]
 gi|75356465|sp|Q5FAF7|SYY_NEIG1 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|254783619|sp|B4RP13|SYY_NEIG2 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|59717425|gb|AAW88830.1| putative tyrosyl-tRNA synthase [Neisseria gonorrhoeae FA 1090]
 gi|193932966|gb|ACF28790.1| putative tyrosyl-tRNA synthase [Neisseria gonorrhoeae NCCP11945]
 gi|226512014|gb|EEH61359.1| tyrosyl-tRNA synthetase [Neisseria gonorrhoeae 1291]
 gi|268582357|gb|EEZ47033.1| tyrosyl-tRNA synthetase [Neisseria gonorrhoeae MS11]
 gi|268584703|gb|EEZ49379.1| tyrosyl-tRNA synthetase [Neisseria gonorrhoeae PID18]
 gi|268621638|gb|EEZ54038.1| tyrosyl-tRNA synthetase [Neisseria gonorrhoeae PID332]
 gi|268626115|gb|EEZ58515.1| tyrosyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035]
 gi|291011512|gb|EFE03508.1| tyrosyl-tRNA synthetase [Neisseria gonorrhoeae DGI2]
 gi|291611683|gb|EFF40752.1| tyrosyl-tRNA synthetase [Neisseria gonorrhoeae F62]
          Length = 431

 Score =  478 bits (1232), Expect = e-133,   Method: Composition-based stats.
 Identities = 156/428 (36%), Positives = 226/428 (52%), Gaps = 23/428 (5%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            +  L  RG I Q ++   LD L ++  +  Y G+D TA SLH GHL  ++ L   Q+ G
Sbjct: 3   VIQDLQSRGLIAQTTDIEALDALLNEQKIALYCGFDPTADSLHIGHLLPVLALRRFQQAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H PI+L+GG T +IGDPSF+   R +  ++ +   +  I+   + F+ +  G   A+M N
Sbjct: 63  HTPIALVGGATGMIGDPSFKAAERSLNSAETVAGWVGSIRSQLTPFLSF-EGGNAAIMAN 121

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDFVE 186
           N  W  S+  +D LR+IG  FSVN ML+ ESV+ R+ R    +SF EF Y +LQ YDF E
Sbjct: 122 NADWFGSMNCLDFLRDIGKHFSVNAMLNKESVKQRIDRDGAGISFTEFAYSLLQGYDFAE 181

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L K +   L++GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  GA+W
Sbjct: 182 LNKRHGAVLEIGGSDQWGNITAGIDLTRRLNQKQVFGLTLPLVTKSDGTKFGKTEGGAVW 241

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKIIA 303
           LN + TSPY F+Q+W  + DADV  F K  T L + EI   +   K  G +  EA++I+A
Sbjct: 242 LNAKKTSPYQFYQFWLKVADADVYKFLKYFTFLSIEEIGVVEAKDKASGSKP-EAQRILA 300

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSI------HSQHMPTISISKDEVSRGMGLLTLIV 357
            E+T ++HG E    A   +   F            + +    +   EVS G+  +  +V
Sbjct: 301 EEMTRLIHGEEALAAAQRISESLFAEDQSRLTESDFEQLALDGLPAFEVSDGINAVEALV 360

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIIS-----------NEKLQIKLQDFDSTGNIKLSF 406
           K G A S  EAR  + + A+ +N                ++   +  +         L  
Sbjct: 361 KTGLAASNKEARGFVNAKAVLLNGKPAEANNPNHAAERPDDAYLLIGEYKRFGKYTILRR 420

Query: 407 GKKNHIIC 414
           GK+NH + 
Sbjct: 421 GKRNHALL 428


>gi|34498527|ref|NP_902742.1| tyrosine-tRNA synthetase [Chromobacterium violaceum ATCC 12472]
 gi|81654998|sp|Q7NTI2|SYY_CHRVO RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|34104383|gb|AAQ60741.1| tyrosine-tRNA synthetase [Chromobacterium violaceum ATCC 12472]
          Length = 424

 Score =  478 bits (1232), Expect = e-133,   Method: Composition-based stats.
 Identities = 153/424 (36%), Positives = 229/424 (54%), Gaps = 19/424 (4%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           ++  L  L  RG I Q ++   L  L ++  VT Y G+D TA SLH G L  +++L   Q
Sbjct: 3   QTALLQDLEARGLIAQTTDMAALQELLNKESVTLYCGFDPTADSLHIGSLVPILMLKRFQ 62

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + GH+P++L+GG T +IGDPSF+   R++     I+  +EKI+     F+ +  G+  A+
Sbjct: 63  QAGHRPVALVGGATGMIGDPSFKAAERKLNTPDVIEGWVEKIRKQVEPFLSF-EGENAAV 121

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYD 183
           M NN  W   +  ++ LR+IG  FSVN M+  ESV+ R+ R+ Q +S+ EF+Y +LQ YD
Sbjct: 122 MANNYDWFGKMNALEFLRDIGKHFSVNAMIKKESVQQRINRDDQGISYTEFSYSLLQGYD 181

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F EL +   C+LQ+GGSDQWGNI  G DL  RL   +++ LT PL+T A GTK GKT SG
Sbjct: 182 FAELNQRLGCKLQIGGSDQWGNITAGTDLTRRLNQTQVYGLTMPLVTKADGTKFGKTESG 241

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKI 301
            IWL+ + TSPY F+Q+W    DADV  F +  + L + EI     A    +   E ++I
Sbjct: 242 TIWLDAKKTSPYAFYQFWLGTADADVYKFLRYFSFLSVDEIASIEEADKSREGKPEGQRI 301

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMS-----------IHSQHMPTISISKDEVSRGM 350
           +A ++T +VHG+   E A       F              +    +PTI + K       
Sbjct: 302 LAEQVTELVHGKAALEAAQRITHSLFSNDLTNLTADDFAQLAQDGLPTIKLDKSAS---- 357

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
           GL+  +   G A S +EAR  ++S A+ +N   + + +  I   +        L  GKK 
Sbjct: 358 GLIDALAAGGLAKSKSEARTFIQSGAVSVNGIKVDSLEHAIGDGERLFGQYSLLKRGKKL 417

Query: 411 HIIC 414
           + + 
Sbjct: 418 YALV 421


>gi|296140090|ref|YP_003647333.1| tyrosyl-tRNA synthetase [Tsukamurella paurometabola DSM 20162]
 gi|296028224|gb|ADG78994.1| tyrosyl-tRNA synthetase [Tsukamurella paurometabola DSM 20162]
          Length = 422

 Score =  478 bits (1231), Expect = e-133,   Method: Composition-based stats.
 Identities = 148/422 (35%), Positives = 227/422 (53%), Gaps = 14/422 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +D L  LS RG I Q ++   L    + G +T Y G+D TASSLHAGHL QL+ L   Q+
Sbjct: 3   ADILEELSWRGLIAQSTDLEALRERLAAGPITLYAGFDPTASSLHAGHLVQLLTLRRFQE 62

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+PI L GG T  +GDP    E R M     + E   KI      F+ +  G+  A++
Sbjct: 63  AGHRPIVLGGGATGQVGDPRDVGE-RVMNSVDTVAEWAAKIDTQLQRFVSF-EGENAAIL 120

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  W   +     LR++G  FS+N ML+ ++V+ RL+ +  +S+ EF+YM+LQAYD+V
Sbjct: 121 VNNLDWHGQMNVPTFLRDVGKHFSINVMLARDTVKRRLESD-GISYTEFSYMLLQAYDYV 179

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT-LSGA 244
           ELA+ YD  LQ GGSDQWGNI+ G+DL  ++    + ALT+ L+T++ G K GK+   G+
Sbjct: 180 ELARRYDAALQTGGSDQWGNIVAGVDLNRKIDGRHVHALTTQLVTSSDGKKFGKSTGGGS 239

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKII 302
           +WL+ E+TSPY ++QY+ N  DADV+ + +  T L   EID + +   +  +   A+K +
Sbjct: 240 LWLDPELTSPYAWYQYFVNTADADVIRYLRWFTFLSKDEIDELERETTEAPQKRTAQKRL 299

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQ--------HMPTISISKDEVSRGMGLLT 354
           A E+TT+VHG ++      A+   F     +          +   S+++        ++ 
Sbjct: 300 AAEMTTLVHGADQTRAVELASQALFGRGDLADLPESTLAAALEEASVAEVRAGEPRTIVD 359

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           L+V  G + S   ARR ++      NN  I +E  +           + L  GKK+    
Sbjct: 360 LLVATGLSDSKGAARRAVREGGAYANNVKIESEDWEPTAGGLLHGSWLVLRRGKKSFAGA 419

Query: 415 HL 416
             
Sbjct: 420 RF 421


>gi|239998197|ref|ZP_04718121.1| putative tyrosyl-tRNA synthase [Neisseria gonorrhoeae 35/02]
 gi|240124945|ref|ZP_04737831.1| putative tyrosyl-tRNA synthase [Neisseria gonorrhoeae SK-92-679]
 gi|268594051|ref|ZP_06128218.1| tyrosyl-tRNA synthetase [Neisseria gonorrhoeae 35/02]
 gi|268683524|ref|ZP_06150386.1| tyrosyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679]
 gi|268547440|gb|EEZ42858.1| tyrosyl-tRNA synthetase [Neisseria gonorrhoeae 35/02]
 gi|268623808|gb|EEZ56208.1| tyrosyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679]
 gi|317163484|gb|ADV07025.1| putative tyrosyl-tRNA synthase [Neisseria gonorrhoeae TCDC-NG08107]
          Length = 431

 Score =  478 bits (1231), Expect = e-133,   Method: Composition-based stats.
 Identities = 156/428 (36%), Positives = 226/428 (52%), Gaps = 23/428 (5%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            +  L  RG I Q ++   LD L ++  +  Y G+D TA SLH GHL  ++ L   Q+ G
Sbjct: 3   VIQDLQSRGLIAQTTDIEALDALLNEQKIALYCGFDPTADSLHIGHLLPVLALRRFQQAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H PI+L+GG T +IGDPSF+   R +  ++ +   +  I+   + F+ +  G   A+M N
Sbjct: 63  HTPIALVGGATGMIGDPSFKAAERSLNSAETVAGWVGSIRSQLTPFLSF-EGGNAAIMAN 121

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDFVE 186
           N  W  S+  +D LR+IG  FSVN ML+ ESV+ R+ R    +SF EF Y +LQ YDF E
Sbjct: 122 NADWFGSMNCLDFLRDIGKHFSVNAMLNKESVKQRIDRDGAGISFTEFAYSLLQGYDFAE 181

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L K +   L++GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT  GA+W
Sbjct: 182 LNKRHGAVLEIGGSDQWGNITAGIDLTRRLNQKQVFGLTLPLVTKSDGTKFGKTEGGAVW 241

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSE---IDRMAKLQGKEINEAKKIIA 303
           LN + TSPY F+Q+W  + DADV  F K  T L + E   I+   K  G +  EA++I+A
Sbjct: 242 LNAKKTSPYQFYQFWLKVADADVYKFLKYFTFLSIEEIGVIEAKDKASGSKP-EAQRILA 300

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSI------HSQHMPTISISKDEVSRGMGLLTLIV 357
            E+T ++HG E    A   +   F            + +    +   EVS G+  +  +V
Sbjct: 301 EEMTRLIHGEEALAAAQRISESLFAEDQSRLTESDFEQLALDGLPAFEVSDGINAVEALV 360

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIIS-----------NEKLQIKLQDFDSTGNIKLSF 406
           K G A S  EAR  + + A+ +N                ++   +  +         L  
Sbjct: 361 KTGLAASNKEARGFVNAKAVLLNGKPAEANNPNHAAERPDDAYLLIGEYKRFGKYTILRR 420

Query: 407 GKKNHIIC 414
           GK+NH + 
Sbjct: 421 GKRNHALL 428


>gi|295112152|emb|CBL28902.1| tyrosyl-tRNA synthetase [Synergistetes bacterium SGP1]
          Length = 427

 Score =  478 bits (1231), Expect = e-133,   Method: Composition-based stats.
 Identities = 149/423 (35%), Positives = 238/423 (56%), Gaps = 12/423 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +   +L  RG+    ++   L  +    +VTAY+G+D TA SLH GHL  LM L WLQ+ 
Sbjct: 4   NAFDVLKARGYFEWCTSEDRLREVMQSEMVTAYVGFDPTADSLHVGHLIPLMALGWLQRA 63

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI+L GGGT +IGDPS + + R ++  + +Q N+E ++   + F+ +  GK  AL+L
Sbjct: 64  GHRPIALAGGGTGLIGDPSGKSKERNLITLEAVQRNVEGVRKQLAHFLDFDCGKNSALLL 123

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDFV 185
           NN  WL  + ++D+L ++G +FSVN +++ E ++SRL+  E+ +S+ EF+Y++LQA DF 
Sbjct: 124 NNYDWLSRMTFLDVLHDVGKYFSVNNLIAREYIKSRLEDPEKGISYTEFSYVLLQAIDFK 183

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L  +Y C+LQMGG+DQ GN++ G +   +    ++F LT PLL TASGTK GKT +GA+
Sbjct: 184 HLHDHYGCKLQMGGNDQQGNLLAGTEYIRKTSGGEVFGLTQPLLLTASGTKFGKTEAGAV 243

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIA 303
           WL+ E TSPY F+Q+W N DD DV    K  T LP+ ++  + +          A++ +A
Sbjct: 244 WLDAERTSPYQFYQFWVNADDRDVERLLKLYTFLPLEDVRLLMEEHAAHPERRVAQRRLA 303

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMP---------TISISKDEVSRGMGLLT 354
           TE+T  VHG   AE  A  +   FD  +    +              S+ ++S   G+L 
Sbjct: 304 TEVTQRVHGAAAAESVAKVSAVLFDPDVDLSGLSEETCLALKREAPCSEAKLSMPAGVLD 363

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           ++       S  EA+R ++   + IN   +++E   I          + +  G+K   + 
Sbjct: 364 VLTACSACASRGEAKRAVRQGGVSINGVRVADEGASIDADQLRYGRYLFVRVGRKKFYVL 423

Query: 415 HLC 417
            + 
Sbjct: 424 SVV 426


>gi|260584362|ref|ZP_05852109.1| tyrosine--tRNA ligase [Granulicatella elegans ATCC 700633]
 gi|260157880|gb|EEW92949.1| tyrosine--tRNA ligase [Granulicatella elegans ATCC 700633]
          Length = 421

 Score =  478 bits (1231), Expect = e-133,   Method: Composition-based stats.
 Identities = 137/425 (32%), Positives = 221/425 (52%), Gaps = 21/425 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG I+Q+++   L  L  +  V+ Y G D T  S+H GHL   M+L   Q  
Sbjct: 2   NIIDDLMWRGAINQMTDEEGLRQLTQEKAVSLYCGVDPTGDSMHIGHLIPFMILRRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSS-FIKYGTGKTDALM 125
           GH+P+ ++GG T  IGDPS R   R +   +++Q N+EK+       F+     +    +
Sbjct: 62  GHRPVIVIGGATGSIGDPSGRTSERVLQTKEQVQHNVEKLTAQMKRLFLTSQEDQEAVRL 121

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  W   +  +D LR+ G  F++N ML+ + V SRL  E  +SF EF+Y ILQ+ DF+
Sbjct: 122 VNNYDWTKELSLLDFLRDYGKHFNLNTMLAKDVVASRL--EVGISFTEFSYQILQSIDFL 179

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK--LFALTSPLLTTASGTKMGKTLSG 243
           +L +  D ++Q+GG+DQWGNI  G++L  +++  +   + LT PL+  + GTK GK+  G
Sbjct: 180 QLFRKEDVQVQIGGADQWGNITAGLELIRKVEGAEARAYGLTIPLMLKSDGTKFGKSAGG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKI 301
           A+WL+ E T+PY F+Q+W N DD DV+ + K  T L   EI+   ++  +     +A+K 
Sbjct: 240 AVWLDSEKTTPYEFYQFWLNQDDRDVIKYIKYFTFLEKEEIEALEVSVQEEPHKRQAQKR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMG 351
           +A E+T  VHG    + A       F   +            ++MPT    K E      
Sbjct: 300 LAEEVTRFVHGEAALQDALKITNALFTGDVQQLNADEIEQGFKNMPTFESEKVE----QN 355

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           L T +V  G   S  ++R  +++ AI IN   I++ +     +       + +  GKK +
Sbjct: 356 LATWLVDLGIEPSRRQSREDIQNGAISINGEKITDLEHVWAPEQSFEGRFVLVRRGKKKY 415

Query: 412 IICHL 416
            +  L
Sbjct: 416 FLVKL 420


>gi|328881503|emb|CCA54742.1| Tyrosyl-tRNA synthetase cluster 1 [Streptomyces venezuelae ATCC
           10712]
          Length = 422

 Score =  478 bits (1231), Expect = e-133,   Method: Composition-based stats.
 Identities = 142/422 (33%), Positives = 230/422 (54%), Gaps = 11/422 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +D +  L  RG   Q ++   L    + G VT Y G+D TA+SLH GHL Q++ +  LQ+
Sbjct: 2   TDIVDELKWRGLFAQSTDEDALRKALADGPVTFYCGFDPTAASLHVGHLVQVLTVRRLQQ 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+P++L+GG T  IGDP      R +   + +   + +++     F+ +  G+  A+M
Sbjct: 62  AGHRPLALVGGATGQIGDPRP-TAERTLNDPETVANWVNRLRSQIEPFLSF-EGENAAVM 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  W   +  I+ LR+IG  F VN+ML+ +SV  RL+ EQ +S+ EF+Y +LQ  DF+
Sbjct: 120 VNNLDWTAGMSAIEFLRDIGKHFRVNKMLTKDSVARRLESEQGISYTEFSYQLLQGMDFL 179

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASGTKMGKTLSGA 244
           EL + Y C LQ GGSDQWGN++ G+DL  RL+   ++ AL +PL+  A GTK GKT  GA
Sbjct: 180 ELYRRYGCTLQQGGSDQWGNLVAGLDLIHRLEPGAEVHALATPLMVKADGTKFGKTEGGA 239

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKII 302
           +WL+ EMT+PY F+Q+W N+DD D+ ++ + L+     E++ +     +      A++ +
Sbjct: 240 VWLDPEMTTPYAFYQFWLNVDDRDISTYMRILSFKSREELEELEAQTAERPQARAAQRAL 299

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQ------HMPTISISKDEVSRGMGLLTLI 356
           A E+TT+VHG ++      A+   F     ++            +    V+    ++ L 
Sbjct: 300 AEELTTLVHGADQCAAVINASKALFGQGELTELDEATLAAALSELPHARVTELGQVVDLF 359

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            + G A S + ARR +K     +NN  ++ E  ++  ++      + L  GKKN      
Sbjct: 360 TEVGLAPSKSGARRTVKEGGAYVNNVKVTAEDAEVSAEELLHGRWLVLRRGKKNLAAIEF 419

Query: 417 CG 418
            G
Sbjct: 420 AG 421


>gi|120434482|ref|YP_860182.1| tyrosyl-tRNA synthetase [Gramella forsetii KT0803]
 gi|117576632|emb|CAL65101.1| tyrosyl-tRNA synthetase [Gramella forsetii KT0803]
          Length = 431

 Score =  478 bits (1231), Expect = e-133,   Method: Composition-based stats.
 Identities = 153/432 (35%), Positives = 228/432 (52%), Gaps = 23/432 (5%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
            + +F+  L+ RG +H      E     S+ + +AY+G D TA SLH GHL  +M+L   
Sbjct: 1   MEKNFVEELNWRGMLHDSMPGTE--EHLSKDMRSAYVGIDPTADSLHIGHLVGVMMLRHF 58

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG-KTD 122
           Q  GHKP +L+GG T +IGDPS +   R ++    ++ N   +K   S F+ + +  +  
Sbjct: 59  QLAGHKPYALVGGATGMIGDPSGKSAERNLLDEATLRHNQNSLKEQLSRFLDFESDIQNA 118

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQ 180
           A+++NN  W+    ++D +R++G   +VN M++ +SV+ RL  E  + +SF EF Y ++Q
Sbjct: 119 AVLVNNYDWMKEFSFLDFIRDVGKHITVNYMMAKDSVKKRLSSESAEGMSFTEFTYQMVQ 178

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
            YDF+ L +  +C LQMGGSDQWGNI  G +L  R+   K +ALT PL+T A GTK GKT
Sbjct: 179 GYDFLHLFREKNCTLQMGGSDQWGNITTGTELIRRIGDGKGYALTCPLITKADGTKFGKT 238

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEA 298
             G IWL+   TSPY F+QYW N  D D   + K  T L   EI+       +     E 
Sbjct: 239 EGGNIWLDANRTSPYKFYQYWLNTSDEDAEKYIKIFTFLSKGEIESLITKHREAPHQREL 298

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKD 344
           +K++  E+TTMVH   E E A  A+   F  S                 + +P   +S  
Sbjct: 299 QKVLGKEVTTMVHSEAEFENALAASEVLFGKSTADDFRKLDEATFLDIFEGVPQAEVSMS 358

Query: 345 EVSRGMGLLTLI-VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
           ++  G+ ++  +  K  F  S  EARR LK N++ +N   +  E   I   D  +   + 
Sbjct: 359 DIEEGLDMIAALSAKTNFLNSNGEARRALKENSVSVNKEKVK-EDYTITSSDLINNKYVI 417

Query: 404 LSFGKKNHIICH 415
           L+ GKKN  I H
Sbjct: 418 LNKGKKNTYIIH 429


>gi|239932103|ref|ZP_04689056.1| tyrosyl-tRNA synthetase [Streptomyces ghanaensis ATCC 14672]
 gi|291440470|ref|ZP_06579860.1| tyrosyl-tRNA synthetase [Streptomyces ghanaensis ATCC 14672]
 gi|291343365|gb|EFE70321.1| tyrosyl-tRNA synthetase [Streptomyces ghanaensis ATCC 14672]
          Length = 422

 Score =  478 bits (1231), Expect = e-133,   Method: Composition-based stats.
 Identities = 145/422 (34%), Positives = 228/422 (54%), Gaps = 11/422 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +D +  L  RG   Q ++   L    + G VT Y G+D TA SLH GHL Q++ L  LQ+
Sbjct: 2   TDIVDELKWRGLFAQSTDEDALRKALADGPVTFYCGFDPTAPSLHVGHLVQVLTLRRLQQ 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+P++L+GG T  IGDP      R +   + +   +E+++G    F+ +  G+  A M
Sbjct: 62  AGHRPLALVGGATGQIGDPRP-TAERTLNPPETVAGWVERLRGQIEPFLSF-EGEGAAEM 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  W  ++  I+ LR+IG  F VN+ML+ +SV  RL+  + +S+ EF+Y +LQA DF+
Sbjct: 120 VNNLDWTQNLSAIEFLRDIGKHFRVNKMLTKDSVARRLESSEGISYTEFSYQLLQAMDFL 179

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASGTKMGKTLSGA 244
           +L + Y C LQ GGSDQWGN+  G+DL  RL+    + A  +PL+T A GTK GKT SGA
Sbjct: 180 QLYRRYGCTLQQGGSDQWGNLTAGLDLIHRLEPDATVHAYATPLMTKADGTKFGKTESGA 239

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKII 302
           +WL+ EMT+PY F+Q+W N DD D+  + + L+    +E++ + +   +      A++ +
Sbjct: 240 VWLDPEMTTPYAFYQFWLNTDDRDISRYLRILSFRSRAELEELEQQTEERPQARAAQRAL 299

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQ------HMPTISISKDEVSRGMGLLTLI 356
           A E+TT+VHG ++      A+   F     +             +    VS    ++ L 
Sbjct: 300 AEELTTLVHGADQTAAVIAASKALFGQGELAGLDERTLAAALSEVPHVRVSELGPVVDLF 359

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            + G   S + ARR +K     +NN+ ++ E      +D      + L  GKKN     +
Sbjct: 360 AEVGLVASKSAARRTVKEGGAYVNNAKVTAEDAVPAREDLLHGRWLVLRRGKKNLAAVEV 419

Query: 417 CG 418
            G
Sbjct: 420 TG 421


>gi|29833001|ref|NP_827635.1| tyrosyl-tRNA synthetase [Streptomyces avermitilis MA-4680]
 gi|81716787|sp|Q829F2|SYY_STRAW RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|29610122|dbj|BAC74170.1| putative tyrosyl-tRNA synthetase [Streptomyces avermitilis MA-4680]
          Length = 422

 Score =  478 bits (1231), Expect = e-133,   Method: Composition-based stats.
 Identities = 139/422 (32%), Positives = 224/422 (53%), Gaps = 11/422 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +D +  L  RG +   ++   L    + G VT Y G+D TA SLH G+L Q++ +  +Q+
Sbjct: 2   TDIVDELKWRGLVALSTDEDALRKAFADGPVTFYCGFDPTAPSLHLGNLVQILTMRRIQQ 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            G++P+ L+GG T +IGDP   +  R +   + + E +E+++   +  + +  G   A+M
Sbjct: 62  AGNRPLGLVGGATGLIGDPKP-NSERTLNSREVVAEWVERLRAQIAPLLDF-EGPNAAIM 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  W   +  I+ LR++G +F VN+M++ E+V  RL  +  +S+ EF+Y ILQ  DF+
Sbjct: 120 VNNLDWTQGLSAIEFLRDVGKYFRVNKMIAKEAVSRRLNSDAGISYTEFSYQILQGMDFL 179

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASGTKMGKTLSGA 244
           EL + Y C LQ GGSDQWGN+  G DL  R +    + AL +PL+T A GTK GKT SG 
Sbjct: 180 ELYRRYGCTLQTGGSDQWGNLTSGTDLIHRAEPDAVVHALGTPLITKADGTKFGKTESGT 239

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKII 302
           IWL+ EMT+PY F+Q+W N DD DV  F +  +     EI+ + K   +  +   A++ +
Sbjct: 240 IWLDPEMTTPYAFYQFWLNADDRDVSKFLRIFSFKSHEEIEELEKQTEERPQARAAQRAL 299

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQ------HMPTISISKDEVSRGMGLLTLI 356
           A E+TT+VHG ++      A+   F     ++            +   +V+    ++ L 
Sbjct: 300 AEELTTLVHGADQTAAVIAASKALFGQGELTELDEATLAAALSELPHVKVAEPAPVVDLF 359

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            +     S + ARR +K     +NN  ++ E      +D      + L  GKKN     +
Sbjct: 360 AEVALVASKSAARRTIKEGGAYVNNVKVAAEDAVPAKEDLLHGRWLVLRRGKKNLAAVEV 419

Query: 417 CG 418
            G
Sbjct: 420 TG 421


>gi|329666572|gb|AEB92520.1| tyrosyl-tRNA synthetase [Lactobacillus johnsonii DPC 6026]
          Length = 420

 Score =  478 bits (1231), Expect = e-133,   Method: Composition-based stats.
 Identities = 149/423 (35%), Positives = 216/423 (51%), Gaps = 17/423 (4%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQ-GVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           K D L  L  RG I+Q ++   L    ++   +  Y G D T  SLH GHL   M++   
Sbjct: 3   KFDILEDLKWRGAINQETDEEGLRKYLAEHDDLALYCGTDPTGDSLHIGHLIPFMIMKRF 62

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q  G+ P+ L+GGGT  IGDPS R   R +  +++++ N EK+            G  + 
Sbjct: 63  QMAGYHPVILIGGGTGSIGDPSGRKTERVLQTAEQVKHNEEKLTAQMKKLF----GTENF 118

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            + NN  WL  +  ID LR+ G FF VN M++ + V SRL  E  +SF EF Y ILQA D
Sbjct: 119 EIKNNAEWLGKLNLIDFLRDYGKFFQVNNMINKDVVASRL--ENGISFTEFTYQILQAID 176

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTL 241
           F  L K+   +LQ+GGSDQWGNI  GIDL  +L+      F LT PL+  A GTK GK+ 
Sbjct: 177 FYHLNKDNGVQLQIGGSDQWGNITAGIDLIHKLEGADRPAFGLTIPLMLKADGTKFGKSA 236

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAK 299
            GA+WL+ E TSPY F+Q+W N DD DV+ + K  T L   EI+ +A+   KE     A+
Sbjct: 237 GGAVWLDPEKTSPYEFYQFWINQDDRDVIKYLKYFTFLSREEIEDLAEKTEKEPWKRAAQ 296

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRGMGLL 353
           K +A E+T  VHG E  ++A       F  +I S  +P I        S +       ++
Sbjct: 297 KKLAEEVTKFVHGEEGLKEAQMITEALFSGNIKSLSVPQIEQALKNAPSAEATHEAKNIV 356

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
             +++     S  +AR  +K+ AI +N     +    I+         + +  GK+ + +
Sbjct: 357 EFLIETKIEPSKRQAREDVKNGAIYVNGERQDDIDFIIEPDSDFDGKYVIIRKGKRKYTL 416

Query: 414 CHL 416
             +
Sbjct: 417 VKI 419


>gi|282856522|ref|ZP_06265797.1| tyrosine--tRNA ligase [Pyramidobacter piscolens W5455]
 gi|282585643|gb|EFB90936.1| tyrosine--tRNA ligase [Pyramidobacter piscolens W5455]
          Length = 425

 Score =  478 bits (1230), Expect = e-133,   Method: Composition-based stats.
 Identities = 154/420 (36%), Positives = 238/420 (56%), Gaps = 13/420 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + L +L  RGFI   ++   +  L  +G+VTAY+G+D TA SLH GHL  LM L WLQ+ 
Sbjct: 4   NALEVLRARGFIDWTTDDGGVKELFGKGMVTAYVGFDPTADSLHVGHLIPLMGLAWLQRL 63

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI L GGGT +IGDPS +   R ++   +I+ N+E +K   + F+ +  G+  AL++
Sbjct: 64  GHRPIVLAGGGTGMIGDPSMKSNERNLLTMDQIRHNVEGVKKQLAHFVSFDCGENSALLV 123

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDFV 185
           NN  WL ++ +++ LR++G FF++N+M++ E VRSR++   +SLSF EF+Y +LQ+YDF 
Sbjct: 124 NNYDWLSAMNFLEFLRDVGKFFTINKMIAKEHVRSRIEDPTKSLSFTEFSYTLLQSYDFY 183

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGE-RLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
            L   Y CRLQ+GG+DQ GNI  GID      +   ++  T+PLL T++G K GKT  GA
Sbjct: 184 HLYTTYGCRLQLGGNDQQGNITSGIDFIRKHEEGAAVYGGTNPLLLTSAGHKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKII 302
           +WL+   TSPY F+Q+W N +DA +    +  T LP+ EID      +Q  E  EA++++
Sbjct: 244 VWLDPAKTSPYQFYQFWVNSEDATIAKTLRYFTFLPLEEIDALVARHMQSPEKREAQRVL 303

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSR--------GMGLLT 354
           A EIT +VHG   A     A+   F  S   + +    +                M L  
Sbjct: 304 AYEITKLVHGENVAANVRHASEILFGGSYTPEDLTEDMLHTLAAETPCGTVDSLPMPLAD 363

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            + + G   S  EA+R + +  + +N    +++  Q++ QD        +  GKK + + 
Sbjct: 364 ALAETGACKSKGEAKRLIAAGGVSVNGVR-ADDGAQLREQDVLCGYYSLIRLGKKKYFMI 422


>gi|302670891|ref|YP_003830851.1| tyrosyl-tRNA synthetase TyrS [Butyrivibrio proteoclasticus B316]
 gi|302395364|gb|ADL34269.1| tyrosyl-tRNA synthetase TyrS [Butyrivibrio proteoclasticus B316]
          Length = 406

 Score =  478 bits (1230), Expect = e-133,   Method: Composition-based stats.
 Identities = 165/408 (40%), Positives = 245/408 (60%), Gaps = 7/408 (1%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG I Q+++  ++  L + G  T YIG+D TA SL AGH   L L+  LQ  G
Sbjct: 3   IYEELKARGLIAQVTDEEQIRELVNAGKATFYIGFDCTADSLTAGHFMALTLMKRLQMAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           +KPI+L+GGGT++IGDPS R + R+M+  ++I  N E  K     FI++G  K  A+M+N
Sbjct: 63  NKPIALIGGGTTMIGDPSGRTDMRKMLTREDIDHNAECFKRQMEKFIEFGDDK--AIMVN 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL ++ YI+LLRE+G+ FSVN ML  E  + R+  E+ LSFLEFNYMI+Q+YDF  +
Sbjct: 121 NADWLMNLNYIELLREVGACFSVNNMLRAECYKQRM--EKGLSFLEFNYMIMQSYDFYYM 178

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            + Y+C L+ GG DQW N++ G +L  R       A+T  LLT + G KMGKT   A+WL
Sbjct: 179 FQKYNCNLEFGGDDQWSNMLGGTELIRRKLGKDAHAMTITLLTDSQGKKMGKTAGNAVWL 238

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           +   TSP++F+QYWRN+ DADV    K LT +P+ EI  M K     INE K+I+A E+T
Sbjct: 239 DPNKTSPFDFYQYWRNVGDADVDKCIKMLTFIPIEEILEMEKWDDSRINEKKEILAFELT 298

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTN 366
           ++VHG+EEA+KA  AA   F       ++P +++ +++   G + +L ++V AG   + +
Sbjct: 299 SLVHGKEEAQKAQDAARALFAGGGDMSNVPAVALKEEDFRDGVVDILQVLVSAGLCNTRS 358

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           EARR ++   +      +++ K       F     + +  GKK++   
Sbjct: 359 EARRAVEQGGVTFAEEKVTDVKTTYTKDVFADG--VMVRKGKKSYKKV 404


>gi|34764162|ref|ZP_00145029.1| Tyrosyl-tRNA synthetase [Fusobacterium nucleatum subsp. vincentii
           ATCC 49256]
 gi|27886066|gb|EAA23375.1| Tyrosyl-tRNA synthetase [Fusobacterium nucleatum subsp. vincentii
           ATCC 49256]
          Length = 406

 Score =  478 bits (1230), Expect = e-133,   Method: Composition-based stats.
 Identities = 168/394 (42%), Positives = 241/394 (61%), Gaps = 6/394 (1%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M    ++   +L ERG++ Q+++  E+  +  +  VT YIG+D TA SLH GH   +M +
Sbjct: 1   MEEKMANVYDVLKERGYLKQLTHEEEIKEILGKEKVTFYIGFDPTADSLHVGHFIAMMFM 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             +Q+ GH+PI+L GGGT +IGDPS R + R MM  + I  N+E IK     FI +   K
Sbjct: 61  AHMQQHGHRPIALAGGGTGMIGDPSGRSDMRTMMTVEMIDHNVECIKKQMQKFIDFSDDK 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
             A++ NN  WL ++ YI+ LR++G  FSVNRML+ E  +SR+  E  LSFLEFNYMI+Q
Sbjct: 121 --AILANNADWLRNLNYIEFLRDVGEHFSVNRMLAAECYKSRM--ENGLSFLEFNYMIMQ 176

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDF  L   Y+C +Q+GG DQW N+I G++L  R      +A+T  LLT + G KMGKT
Sbjct: 177 AYDFYVLNHKYNCTMQLGGDDQWSNMIAGVELLRRKDRKSAYAMTCTLLTNSEGKKMGKT 236

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
             GA+WL+ + T+PY F+QYWRNIDD DV      LT LPM E+ R+  L+  EINEAKK
Sbjct: 237 AKGALWLDPKKTTPYEFYQYWRNIDDQDVEKCLALLTFLPMDEVRRLGTLKDAEINEAKK 296

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           ++A E+T ++HG EEA KA  A    F    +  + P I +S ++ S+   LL ++V   
Sbjct: 297 VLAYEVTKIIHGEEEATKAKEATEALFGSGNNLDNAPKIEVSDEDFSKE--LLDVLVDRK 354

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
              + +E RR ++ N + +N+  I + K  +   
Sbjct: 355 IIKTKSEGRRLIEQNGMSLNDEKIKDVKFTLNDN 388


>gi|262067362|ref|ZP_06026974.1| tyrosine--tRNA ligase [Fusobacterium periodonticum ATCC 33693]
 gi|291378925|gb|EFE86443.1| tyrosine--tRNA ligase [Fusobacterium periodonticum ATCC 33693]
          Length = 402

 Score =  478 bits (1230), Expect = e-133,   Method: Composition-based stats.
 Identities = 167/389 (42%), Positives = 242/389 (62%), Gaps = 6/389 (1%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           ++   +L ERG++ Q+++  E+  L  +  VT YIG+D TA SLH GH   +M +  +Q+
Sbjct: 2   ANVYDVLKERGYLKQLTHEDEIKELLEKEKVTFYIGFDPTADSLHVGHFIAMMFMAHMQQ 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+PI+L GGGT ++GDPS R + R MM  + I  N+E IK     FI +  GK  A++
Sbjct: 62  HGHRPIALAGGGTGMVGDPSGRTDMRAMMTVETIDHNVECIKKQMQKFIDFSDGK--AIL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
            NN  WL ++ YI+ LR+IG  FSVNRML+ E  +SR+  E  LSFLEFNYMI+Q YDF 
Sbjct: 120 ENNANWLRNLNYIEFLRDIGEHFSVNRMLAAECYKSRM--ENGLSFLEFNYMIMQGYDFY 177

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L K Y+C +Q+GG DQW N+I G++L  R    + +A+T  LLT + G KMGKT  GA+
Sbjct: 178 VLNKKYNCTMQLGGDDQWSNMIAGVELIRRKDRRQAYAMTCTLLTNSEGKKMGKTAKGAL 237

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
           WL+ + T+PY F+QYWRNIDD DV +    LT LPM E+ R+  L+   INEAKK++A E
Sbjct: 238 WLDPKKTTPYEFYQYWRNIDDQDVENCLALLTFLPMDEVRRLGALKDAAINEAKKVLAYE 297

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           +T ++HG EEA KA  A    F    +  + P I +  ++ S+   LL ++V      + 
Sbjct: 298 VTKIIHGEEEATKAKEATEALFGSGNNLDNAPKIELVAEDFSKE--LLDVLVDRKILKTK 355

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQ 394
           +E RR ++ N + +N+  I++ K  +   
Sbjct: 356 SEGRRLIEQNGMSLNDEKITDVKFTLNEN 384


>gi|326334271|ref|ZP_08200492.1| tyrosine--tRNA ligase [Nocardioidaceae bacterium Broad-1]
 gi|325947934|gb|EGD40053.1| tyrosine--tRNA ligase [Nocardioidaceae bacterium Broad-1]
          Length = 423

 Score =  478 bits (1230), Expect = e-133,   Method: Composition-based stats.
 Identities = 151/421 (35%), Positives = 226/421 (53%), Gaps = 17/421 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L  RG I   ++   L    + G V  YIG+D TA SLH G+L Q+ +   LQ+ G
Sbjct: 7   LLDDLEWRGLIADSTDRDALREALAGGSVRFYIGFDPTAPSLHMGNLLQITMAMRLQQAG 66

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H P  L+GG T +IGDP    E R +   + ++E + K++     F+ +  G+T A M+N
Sbjct: 67  HTPYVLVGGATGMIGDPRDSGE-RTLNSPETVKEWVGKVRSQIERFVSF-EGETAATMVN 124

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W  S+  ID LR+IG  F VNRML+ ++V+ RL  E  +S+ EF+Y++LQ+ D++ L
Sbjct: 125 NADWTASLSVIDFLRDIGKHFPVNRMLARDTVKKRL--EDGISYTEFSYILLQSMDYLNL 182

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            + +   LQ GGSDQWGNI  G++L  R+    + A T+PL+T A GTK GKT  GA+WL
Sbjct: 183 FRTHGVSLQFGGSDQWGNITGGVELVRRVTGETVHAFTTPLITKADGTKYGKTEGGALWL 242

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIATE 305
           +  M SPY F Q+W N++DA V    +  T L   EI+ +     ++     A+K +A  
Sbjct: 243 DPTMMSPYAFHQFWLNVEDAKVGEMLRVFTFLSHEEIETLEAQHAEKPFLRVAQKALADH 302

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKD-------EVSRGMGL---LTL 355
           +TT+VHG  E E+A  AA   F     +  + + +++         E+ RG  L   + L
Sbjct: 303 MTTLVHGAGETEQAKQAAAALFGGGDLA-TLSSTTLAAAITEAGAVELERGEELPTYVDL 361

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            V AG  +S  EARR +      +NN  + + +  +  ++    G I L  GKK      
Sbjct: 362 FVAAGLVSSKGEARRTISEGGAYVNNVRVEDAEGALDEKELLGDGWIVLRRGKKKFAGVR 421

Query: 416 L 416
           L
Sbjct: 422 L 422


>gi|289765575|ref|ZP_06524953.1| tyrosyl-tRNA synthetase [Fusobacterium sp. D11]
 gi|289717130|gb|EFD81142.1| tyrosyl-tRNA synthetase [Fusobacterium sp. D11]
          Length = 406

 Score =  478 bits (1230), Expect = e-133,   Method: Composition-based stats.
 Identities = 167/394 (42%), Positives = 242/394 (61%), Gaps = 6/394 (1%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M    ++   +L ERG++ Q+++  E+  +  +  VT YIG+D TA SLH GH   +M +
Sbjct: 1   MEEKMANVYDVLKERGYLKQLTHEEEIREILGKEKVTFYIGFDPTADSLHVGHFIAMMFM 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             +Q+ GH+PI+L GGGT +IGDPS R + R MM  + I  N+E IK     FI +   K
Sbjct: 61  AHMQQHGHRPIALAGGGTGMIGDPSGRSDMRTMMTVEMIDHNVECIKKQMQKFIDFSDDK 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
             A++ NN  WL ++ YI+ LR++G  FSVNRML+ E  +SR+  E  LSFLEFNYMI+Q
Sbjct: 121 --AILANNADWLRNLNYIEFLRDVGEHFSVNRMLAAECYKSRM--ENGLSFLEFNYMIMQ 176

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDF  L   Y+C +Q+GG DQW N+I G++L  R      +A+T  LLT + G KMGKT
Sbjct: 177 AYDFYVLNHKYNCTMQLGGDDQWSNMIAGVELLRRKDRKSAYAMTCTLLTNSEGKKMGKT 236

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
             GA+WL+ + T+PY F+QYWRNIDD DV      LT LPM E+ R+  L+  EINEAKK
Sbjct: 237 AKGALWLDPKKTTPYEFYQYWRNIDDQDVEKCLALLTFLPMDEVRRLGALKDAEINEAKK 296

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           ++A E+T ++HG EEA KA  A    F    +  + P I ++ ++ S+   LL ++V   
Sbjct: 297 VLAYEVTKIIHGEEEATKAKEATEALFGSGNNLDNAPKIEVTDEDFSKE--LLDVLVDRK 354

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
              + +E RR ++ N + +N+  I + K  +  +
Sbjct: 355 IIKTKSEGRRLIEQNGMSLNDEKIKDVKFTLNDK 388


>gi|238917062|ref|YP_002930579.1| tyrosyl-tRNA synthetase [Eubacterium eligens ATCC 27750]
 gi|238872422|gb|ACR72132.1| tyrosyl-tRNA synthetase [Eubacterium eligens ATCC 27750]
          Length = 447

 Score =  478 bits (1230), Expect = e-133,   Method: Composition-based stats.
 Identities = 171/413 (41%), Positives = 254/413 (61%), Gaps = 7/413 (1%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           K      L  RG I Q+++   +  L + G  T YIG+D TA SLH GH   L L+  LQ
Sbjct: 40  KMTLYDELVARGLIAQVTDEALIKDLINNGKATFYIGFDPTADSLHVGHFMALCLMKRLQ 99

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             G+KPI+L+GGGT++IGDPS R + R+M+  ++IQ N++  K   + FI +   K  AL
Sbjct: 100 MAGNKPIALIGGGTAMIGDPSGRTDMRKMLTPEQIQHNVDCFKKQMARFIDFSDDK--AL 157

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           ++NN  WL ++ Y++LLRE+G+ FSVN ML  E  + R+  E+ LSFLEFNYMI+Q+YDF
Sbjct: 158 LVNNADWLLNLNYVELLREVGACFSVNNMLRAECYKQRM--EKGLSFLEFNYMIMQSYDF 215

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L + Y C LQ GG+DQW N++ G +L  R       A+T  LL  + G KMGKT SGA
Sbjct: 216 YMLYQKYGCNLQFGGNDQWSNMLGGTELIRRKLDKDASAMTITLLLNSEGKKMGKTASGA 275

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WL+ + TSPY+F+QYWRN+DDADV+   + LT LP+ EID+M   +G ++N+AK+I+A 
Sbjct: 276 VWLDPDKTSPYDFYQYWRNVDDADVLKCIRMLTFLPLEEIDKMDSWEGAQLNKAKEILAY 335

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV-SRGMGLLTLIVKAGFAT 363
           E+T +VHG EEA+KA   A   F     + +MPT  +  D      +  + L+  AG AT
Sbjct: 336 ELTKLVHGEEEAKKAEATAKAIFTGG-DAANMPTAKLEADSFTDDEIDAINLVFGAGLAT 394

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           + +EARR ++   + ++   +++   +     F+  G + +  GKK+ +   +
Sbjct: 395 TKSEARRTIQQGGVSVDGEKVADIAAKFPKSMFEGDG-VVVKKGKKSFVKVSV 446


>gi|332878166|ref|ZP_08445895.1| tyrosine--tRNA ligase [Capnocytophaga sp. oral taxon 329 str.
           F0087]
 gi|332683904|gb|EGJ56772.1| tyrosine--tRNA ligase [Capnocytophaga sp. oral taxon 329 str.
           F0087]
          Length = 431

 Score =  478 bits (1230), Expect = e-132,   Method: Composition-based stats.
 Identities = 149/433 (34%), Positives = 228/433 (52%), Gaps = 24/433 (5%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
            +F+  L  RG I  I    E      +G+  AY+G D TA SLH GHL  +M+L   QK
Sbjct: 2   KNFIEELRWRGMIQDIMPETE--QHLMEGLRAAYVGIDPTADSLHIGHLVGVMMLRHFQK 59

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG-KTDAL 124
            GHKP +L+GG T +IGDPS +   R ++  + +  NI+ I+   + F+ + +     A 
Sbjct: 60  CGHKPYALVGGATGMIGDPSGKSAERNLLTEEVLAHNIKGIQKQLAKFLDFESEAPNRAE 119

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL---KREQSLSFLEFNYMILQA 181
           ++NN  W+    ++  +R+IG   +VN M++ +SV+ R    +    +SF EF+Y +LQ 
Sbjct: 120 LVNNYDWMKEFSFLSFIRDIGKHITVNYMMAKDSVKKRFDPNENTDGMSFTEFSYQLLQG 179

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
           YDF+ L +     LQMGGSDQWGNI  G +L  R+   K +ALT PL+T A GTK GK+ 
Sbjct: 180 YDFLHLYRQKGLTLQMGGSDQWGNITTGTELIRRIAGGKAYALTCPLITKADGTKFGKSE 239

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAK 299
            G +WL+ E TSPY F+QYW N+ D D   + K  T L   EI+++         +   +
Sbjct: 240 GGNVWLDAEKTSPYKFYQYWINVSDEDAQRYIKIFTMLSREEIEQLISEHQAAPHLRVLQ 299

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDE 345
             +A E+T +VHGREE +KA  A+   F  S                   +P   +++ +
Sbjct: 300 NKLAEELTVLVHGREELQKAQKASQILFGNSTSDDLRQLDAKTFLEVFDGVPQAEVTRAD 359

Query: 346 VSRGMGLLTLI-VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           ++ G+ ++  +  K  F  S +EARR LK  +I +N   +  E   I  +D      + L
Sbjct: 360 IAAGLDMIAALSAKTSFIASNSEARRALKEKSIAVNKEKVE-ESYIIGEKDIIDDKFVLL 418

Query: 405 SFGKKNHIICHLC 417
             GKKN+ +  + 
Sbjct: 419 QRGKKNYFVIVIV 431


>gi|297180364|gb|ADI16581.1| tyrosyl-tRNA synthetase [uncultured gamma proteobacterium
           HF0010_01E20]
          Length = 426

 Score =  477 bits (1229), Expect = e-132,   Method: Composition-based stats.
 Identities = 161/417 (38%), Positives = 233/417 (55%), Gaps = 10/417 (2%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           F+  L  RG + Q+S+ + L      G  + Y G+D TA SLH G L  L+ L   Q  G
Sbjct: 6   FMDELRWRGLLTQVSDEQGLIDYLDSGCQSLYCGFDPTADSLHVGSLVPLLALRRFQLQG 65

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK-TDALML 126
           H+P+ L+GG T +IGDPS RD  R +   + +    + ++   S F+++ +   T A ++
Sbjct: 66  HRPLLLLGGATGMIGDPSGRDNERSLNELETVSNWTQALREQVSGFLEFDSKDGTAAKIV 125

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDFV 185
           NN  W   +  ++ LR+IG  FSVN M+  +SV+SRL R  + +S+ EF+YM+LQA DF+
Sbjct: 126 NNLDWTRDLPVVEFLRDIGKHFSVNSMIQRDSVKSRLARTNEGISYTEFSYMLLQAMDFL 185

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            LA+N  C LQ+GGSDQWGNII GIDL  R      FA T PL+T A GTK GK+ +GA+
Sbjct: 186 RLAQNESCFLQIGGSDQWGNIISGIDLIRRYTGRSAFAFTMPLVTKADGTKFGKSAAGAV 245

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIA 303
           W++   TS Y F+Q+W N  D DVV F K  T L  SEI    +  L   E+ EA+K +A
Sbjct: 246 WIDPRKTSQYVFYQFWLNTADEDVVKFLKLFTFLSQSEIQSLEVEVLDRPELREAQKKLA 305

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSI------HSQHMPTISISKDEVSRGMGLLTLIV 357
            E+TT+VHG++    A   +   F   I        + +    +     + G GLL +IV
Sbjct: 306 QEVTTIVHGKQAVVAAERISAALFAGDIGQLLESDLRELQQDGMPCTSCAVGTGLLAVIV 365

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +AG   ST EAR+ +++N IK+N   I +    +  +D        L  GKKN+ + 
Sbjct: 366 EAGLTKSTGEARKLIQANGIKLNGDSIDDVGRGLTFEDALFKRFYLLRKGKKNYHLI 422


>gi|303245599|ref|ZP_07331882.1| tyrosyl-tRNA synthetase [Desulfovibrio fructosovorans JJ]
 gi|302492862|gb|EFL52727.1| tyrosyl-tRNA synthetase [Desulfovibrio fructosovorans JJ]
          Length = 424

 Score =  477 bits (1229), Expect = e-132,   Method: Composition-based stats.
 Identities = 154/422 (36%), Positives = 225/422 (53%), Gaps = 12/422 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    LS RG +HQ S+   L           Y G+D TA SLH G+L  L+ L    K 
Sbjct: 2   NIFDELSWRGLVHQTSDDAGLREHLETPGRVLYCGFDPTADSLHIGNLVPLLALARFAKA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+P+ L+GG T +IGDPS +D+ R++  ++ I  + EKIK    +F      + +    
Sbjct: 62  GHRPLFLLGGATGLIGDPSGKDKERQLKTAETIAASAEKIKTHALAFFARVGVEGEVTPA 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL-KREQSLSFLEFNYMILQAYDFV 185
           NN  W   +  I+ LR+IG  F++N M++ +SV+SR+ + E  +S+ EF+YMILQ+ DF 
Sbjct: 122 NNLDWTRPMSVIEFLRDIGKHFTINYMMAKDSVKSRIGREETGISYTEFSYMILQSMDFE 181

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L +   C LQ+GG DQ+GNI  G++L  R      + LT PL+TTASG K GK+  GAI
Sbjct: 182 HLNRTLGCTLQIGGGDQFGNITAGLELIRRKTGNTAYGLTFPLITTASGAKFGKSEKGAI 241

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIA 303
           +LN E+TSPY F+QYW N DD DV +F +  T LP  EID +A    +   +  A+K +A
Sbjct: 242 FLNPELTSPYAFYQYWINADDRDVCNFLRYFTFLPKEEIDALAVETAERPHLRAAQKRLA 301

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGM---------GLLT 354
            E T M+HG EE  K        F         P    +  E + G+          L  
Sbjct: 302 RETTAMIHGEEELAKVEAVTEALFGGGELHAVDPGTLKAALEAAPGLNFEALPDVPPLPK 361

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           L+   G   S ++AR+ +K+  I +NN  + +E   +  +DF     + L  GKKN+ + 
Sbjct: 362 LLADIGLCPSNSQARKDIKAGGIYLNNERVPSEDRALVAEDFLGGDLLILRKGKKNYGVV 421

Query: 415 HL 416
            L
Sbjct: 422 TL 423


>gi|296328752|ref|ZP_06871266.1| tyrosine--tRNA ligase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 23726]
 gi|296154087|gb|EFG94891.1| tyrosine--tRNA ligase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 23726]
          Length = 402

 Score =  477 bits (1229), Expect = e-132,   Method: Composition-based stats.
 Identities = 167/389 (42%), Positives = 240/389 (61%), Gaps = 6/389 (1%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           ++   +L ERG++ Q+++  E+  +  +  VT YIG+D TA SLH GH   +M +  +Q+
Sbjct: 2   ANVYDVLKERGYLKQLTHEEEIREILGKEKVTFYIGFDPTADSLHVGHFIAMMFMAHMQQ 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+PI+L GGGT +IGDPS R + R MM  + I  N+E IK     FI +   K  A++
Sbjct: 62  HGHRPIALAGGGTGMIGDPSGRSDMRTMMTVEMIDHNVECIKKQMQKFIDFSEDK--AIL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
            NN  WL ++ YI+ LR++G  FSVNRML+ E  +SR+  E  LSFLEFNYMI+QAYDF 
Sbjct: 120 ANNADWLRNLNYIEFLRDVGEHFSVNRMLAAECYKSRM--ENGLSFLEFNYMIMQAYDFY 177

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L   Y+C +Q+GG DQW N+I G++L  R      +A+T  LLT + G KMGKT  GA+
Sbjct: 178 ILNHKYNCTMQLGGDDQWSNMIAGVELLRRKDRKPAYAMTCTLLTNSEGKKMGKTAKGAL 237

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
           WL+ E T+PY F+QYWRNIDD DV      LT LPM E+ R+  L+  EINEAKK++A E
Sbjct: 238 WLDPEKTTPYEFYQYWRNIDDQDVEKCLALLTFLPMDEVRRLGALKDAEINEAKKVLAYE 297

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           +T ++HG EEA KA  A    F    +  + P I ++ ++ S+   LL ++V      + 
Sbjct: 298 VTKIIHGEEEATKAKEATEALFGSGNNLDNAPKIEVTDEDFSKE--LLDVLVDRKIIKTK 355

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQ 394
           +E RR ++ N + +N+  I + K  +   
Sbjct: 356 SEGRRLIEQNGMSLNDEKIKDVKFTLNDN 384


>gi|85708611|ref|ZP_01039677.1| tyrosyl-tRNA synthetase [Erythrobacter sp. NAP1]
 gi|85690145|gb|EAQ30148.1| tyrosyl-tRNA synthetase [Erythrobacter sp. NAP1]
          Length = 408

 Score =  477 bits (1229), Expect = e-132,   Method: Composition-based stats.
 Identities = 192/412 (46%), Positives = 278/412 (67%), Gaps = 7/412 (1%)

Query: 3   AFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
            ++SD L +L ERG +HQI++P  LD L ++ VVT Y+G+D TASSLH G+L  +MLL  
Sbjct: 2   TYESDLLRLLEERGHLHQITDPGALDQLVTKKVVTGYVGFDPTASSLHIGNLASIMLLKR 61

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD 122
           LQ+ GH+PI +MGGGT+ +GDPS +DE+R M+  + +  NIE IKG F   + +   KT 
Sbjct: 62  LQQAGHRPIVIMGGGTAKVGDPSGKDETRTMLTEERLASNIEGIKGSFERILDFDDSKTG 121

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
           AL++NN+ WL  + YI++LR++G  F++NRML+F+SV+ RL REQ LSFLEFNYMI+QAY
Sbjct: 122 ALLINNDDWLSELGYIEMLRDVGPHFTINRMLTFDSVKLRLDREQPLSFLEFNYMIMQAY 181

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DF+ LA++YDC+LQ+GGSDQWGNI+ GI+L  R+   +++ +T+PL+T A G KMGK++ 
Sbjct: 182 DFLVLARDYDCQLQLGGSDQWGNIVNGIELNRRIDQREVYGVTAPLITRADGAKMGKSVD 241

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKII 302
           GAIWLN++    Y+FWQYWRN DD DV  F +  T + + EI R+ KL+G EIN+AK ++
Sbjct: 242 GAIWLNEDALPAYDFWQYWRNTDDRDVGKFLRLFTDISLDEIARLEKLEGAEINDAKVVL 301

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFA 362
           A  +T MV G   A  A   A   F      + +PT+S+  D    GM +  ++ + GF 
Sbjct: 302 ANAVTAMVRGEAAARAAEETANATFAGGGAGEDLPTLSVGGD----GMRIGAILTQIGFT 357

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            S  EA+R +   A+K++   +S+    I++ D     ++KLS GKK H + 
Sbjct: 358 ASNGEAKRKIAEGAVKLDGEPVSDPGSLIEIAD---GASVKLSLGKKKHGLL 406


>gi|320537135|ref|ZP_08037107.1| tyrosyl-tRNA synthetase [Treponema phagedenis F0421]
 gi|320146008|gb|EFW37652.1| tyrosyl-tRNA synthetase [Treponema phagedenis F0421]
          Length = 406

 Score =  477 bits (1229), Expect = e-132,   Method: Composition-based stats.
 Identities = 164/409 (40%), Positives = 240/409 (58%), Gaps = 7/409 (1%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           ++ L +L ERGF  Q +N   L     +G ++ Y+G D T  SLH GH+  +     L  
Sbjct: 2   NEALKVLQERGFFQQCTNLEGLSERMDKGPISFYVGIDPTGPSLHIGHMLPVFAARHLCA 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHK   L GGGT+ IGDPS + E R+M+  + + +N+E I      F+ +         
Sbjct: 62  FGHKACILAGGGTARIGDPSGKTEMRKMLSYETLDKNVESIIAQLGRFLDFD--GKTIFH 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
            NN+ WL ++ YID LREIGS FSVNRMLSFES + R+  E  LSF+EFNY +LQ+YDF+
Sbjct: 120 ANNKDWLANLNYIDFLREIGSQFSVNRMLSFESYKRRM--ETGLSFIEFNYQLLQSYDFL 177

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L + ++  +Q+GG DQWGNI+ G+DL  RL++ ++F LT  L+T A G KMGK+  GA+
Sbjct: 178 MLNEKHNIEMQIGGDDQWGNIVAGVDLIRRLRSKEVFGLTFALVTRADGQKMGKSEKGAL 237

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
           +L+ ++ SPY F+QYWRN  DADV  F    T LP+ EID       + IN+AK+ +A E
Sbjct: 238 FLDPKLVSPYEFFQYWRNTMDADVRKFMLLFTFLPIEEIDSYI---AENINKAKEKLAYE 294

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           +T ++HG+E A+ A   A   F        MPTI +      +G+ ++TL V+A  A+S 
Sbjct: 295 VTRLIHGKEAADSALEGARAAFGTGGDKSSMPTIEMPYTVFEKGIDIVTLFVEAQLASSK 354

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +EARR ++     +  + I + K  I  ++ +S   + L  GKK  +  
Sbjct: 355 SEARRLIEQGGAFVGEATIKDIKAMINTENLNSEKELILRAGKKRFVRI 403


>gi|254471831|ref|ZP_05085232.1| tyrosyl-tRNA synthetase [Pseudovibrio sp. JE062]
 gi|211959033|gb|EEA94232.1| tyrosyl-tRNA synthetase [Pseudovibrio sp. JE062]
          Length = 423

 Score =  477 bits (1229), Expect = e-132,   Method: Composition-based stats.
 Identities = 194/413 (46%), Positives = 268/413 (64%), Gaps = 4/413 (0%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KS+ L +L +RGF+HQ ++   LD     G +TAY G+D TA SLH GHL  LM + WLQ
Sbjct: 15  KSEALQLLIDRGFLHQCTDLEALDEKLQAGPITAYAGFDATADSLHVGHLLPLMAMRWLQ 74

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           KTGHKPI L+GGGT+ +GDPSFR ESR ++   +I  N+  I+           G+    
Sbjct: 75  KTGHKPILLIGGGTTRVGDPSFRSESRPLLDDAQISHNLAGIRATVERLFDLSEGQGQ-- 132

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           ++NN  WL   ++++ LR+ G+ F+VNRM++F+SVRSRL+ +Q LS LEF YM+LQA DF
Sbjct: 133 IVNNAEWLDEFRFLEFLRDFGTHFTVNRMMTFDSVRSRLEAQQPLSVLEFCYMMLQAVDF 192

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           VEL + +DC LQ+GGSDQWGNI+ G+DLG R  + +LF  T PLLTTASG+KMGKT  GA
Sbjct: 193 VELNQRFDCTLQIGGSDQWGNIVNGVDLGRRSGS-QLFGFTLPLLTTASGSKMGKTAEGA 251

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WLN    S + FWQ+WRN+DDADV  F K  T LP+ EIDR++ L+G+E+NEAKKI+AT
Sbjct: 252 VWLNPSRLSSFGFWQFWRNVDDADVPRFLKLFTDLPLGEIDRLSTLKGQELNEAKKILAT 311

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           ++T +VHG   AE A       F+        PT  +    +++ +GLL L+VK GFAT+
Sbjct: 312 QVTGIVHGLAAAEAALQQGEALFNGQEDLTE-PTHELPLSLLAKPLGLLDLLVKTGFATT 370

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            +EARR ++   +++N SI+  E   I   D      + L+ GK+   +    
Sbjct: 371 NSEARRLIRGGGVRLNTSIVLEETRMISEGDLKPGERLTLAVGKRRKALVEFV 423


>gi|285808432|gb|ADC35958.1| putative tyrosyl-tRNA synthetase [uncultured bacterium 98]
          Length = 445

 Score =  477 bits (1229), Expect = e-132,   Method: Composition-based stats.
 Identities = 151/424 (35%), Positives = 239/424 (56%), Gaps = 15/424 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D  S    RG ++  +    +    + G VTAY G+D TASSLH G L Q+M L  LQK 
Sbjct: 2   DVFSEFEWRGVVYDAT--EGVREALATGSVTAYAGFDPTASSLHVGSLMQIMALARLQKY 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH PI+++GGGT +IGDPS +   R +   +++  N++ I+   S F+ +      A ++
Sbjct: 60  GHSPIAVVGGGTGLIGDPSGKSAERTLQTPEQVDVNVQGIRAQLSRFLDFDAASNPARLV 119

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  +  ++ LR++G  F+VN +L+ ESV+ RL+ E  +S+ EF+Y++LQAYDF+E
Sbjct: 120 NNADWLTRLSAMEFLRDVGKHFTVNYILAKESVKRRLESEDGISYTEFSYLLLQAYDFLE 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L   ++C LQ+GGSDQWGNI  G DL  RL+  K   L SPL+TTASGTK GKT +G IW
Sbjct: 180 LHDRFNCTLQVGGSDQWGNITAGCDLIRRLRGVKAQGLVSPLVTTASGTKFGKTEAGTIW 239

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIAT 304
           L+   TSP+ F+Q+W N +D D + + K  T L  + I+ + +      E   A++ +A 
Sbjct: 240 LDAGRTSPFRFYQFWLNTEDTDAIRYLKFFTDLDAAAIEELGRGMAVAPEARAAQRTLAR 299

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVS-RGMGLL 353
           E+T +VHG    E+A   +   F   I +          +  P+  +  DE +  GM ++
Sbjct: 300 EVTRIVHGPAHVERAERTSSVLFGEDIATLPLEDVLAVFEDAPSTEVHADEFAGEGMSMI 359

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            L+ +   A S +EARR ++S  + +NN  +S+ + ++   +        +  G++   +
Sbjct: 360 DLLARVQLAPSKSEARRLVQSGGVYVNNRRVSDSQARLTRAEALGGRLFIVRKGQRQQHL 419

Query: 414 CHLC 417
             + 
Sbjct: 420 VKMV 423


>gi|296284067|ref|ZP_06862065.1| tyrosyl-tRNA synthetase [Citromicrobium bathyomarinum JL354]
          Length = 407

 Score =  477 bits (1229), Expect = e-132,   Method: Composition-based stats.
 Identities = 201/414 (48%), Positives = 278/414 (67%), Gaps = 9/414 (2%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           MP ++S+ L++L +R + HQI++   LD+L S+ +V  Y+G+D TASSLH G L Q+MLL
Sbjct: 1   MPTYRSELLNVLDQRHYTHQITDAERLDLLASEQIVPGYVGFDPTASSLHVGSLVQIMLL 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             LQ+TGHKPI +MGGGT  IGDPS RDESR++M  + I  NI  I+ +F   + +G G 
Sbjct: 61  RRLQQTGHKPIVVMGGGTGKIGDPSGRDESRQLMTEEVIAANIASIRKVFERILTFGDGP 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           TDA+M+NN+ WL  + Y+DLLR++G  F+VNRML+F+SV+ RL REQ L+FLEFNYMILQ
Sbjct: 121 TDAVMVNNDEWLSGLGYLDLLRDVGPHFTVNRMLTFDSVKMRLDREQPLTFLEFNYMILQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDF ELA+ Y CRLQMGGSDQWGNI+ GI+L  R    +LF  T+PLLTTA G KMGKT
Sbjct: 181 AYDFRELAERYGCRLQMGGSDQWGNIVNGIELTRRTGGGELFGFTTPLLTTADGKKMGKT 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
            SGA+WLN++M   Y+FWQ+WRN DD DV  F +  T +P+ EI+R+ +L+G EIN+AK 
Sbjct: 241 ASGAVWLNEDMLPAYDFWQFWRNTDDRDVGRFLRLFTDIPLDEIERLERLEGAEINDAKV 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
            +A  +T +V G + A  A   A E F        +PT+S+       GMGL   +   G
Sbjct: 301 ALANAVTALVRGEDAAAAAEATARETFAGGA-GGDLPTLSV-----GDGMGLPAALSALG 354

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           F  S  EA+R +   A+++++ ++S+  + + +   +      LS G+K H I 
Sbjct: 355 FTASNKEAKRKIAEGAVRLDDEVLSDSAMVLTVAQGEQRR---LSLGRKKHAIL 405


>gi|256846725|ref|ZP_05552181.1| tyrosyl-tRNA synthetase [Fusobacterium sp. 3_1_36A2]
 gi|256717945|gb|EEU31502.1| tyrosyl-tRNA synthetase [Fusobacterium sp. 3_1_36A2]
          Length = 406

 Score =  477 bits (1228), Expect = e-132,   Method: Composition-based stats.
 Identities = 167/394 (42%), Positives = 242/394 (61%), Gaps = 6/394 (1%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M    ++   +L ERG++ Q+++  E+  +  +  VT YIG+D TA SLH GH   +M +
Sbjct: 1   MEEKMANVYDVLKERGYLKQLTHEEEIREILGKEKVTFYIGFDPTADSLHVGHFIAMMFM 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             +Q+ GH+PI+L GGGT +IGDPS R + R MM  + I  N+E IK     FI +   K
Sbjct: 61  AHMQQHGHRPIALAGGGTGMIGDPSGRSDMRTMMTVEMIDHNVECIKKQMQKFIDFSDDK 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
             A++ NN  WL ++ YI+ LR++G  FSVNRML+ E  +SR+  E  LSFLEFNYMI+Q
Sbjct: 121 --AILANNADWLRNLNYIEFLRDVGEHFSVNRMLAAECYKSRM--ENGLSFLEFNYMIMQ 176

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDF  L   Y+C +Q+GG DQW N+I G++L  R      +A+T  LLT + G KMGKT
Sbjct: 177 AYDFYVLNHKYNCTMQLGGDDQWSNMIAGVELLRRKDRKSAYAMTCTLLTNSEGKKMGKT 236

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
             GA+WL+ + T+PY F+QYWRNIDD DV      LT LPM E+ R+  L+  EINEAKK
Sbjct: 237 AKGALWLDPKKTTPYEFYQYWRNIDDQDVEKCLALLTFLPMDEVRRLGTLKDAEINEAKK 296

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           ++A E+T ++HG EEA KA  A    F    +  + P I ++ ++ S+   LL ++V+  
Sbjct: 297 VLAYEVTKIIHGEEEATKAKEATEALFGSGNNLDNAPKIEVTDEDFSKE--LLDVLVEKK 354

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
              + +E RR ++ N + +N+  I + K  +   
Sbjct: 355 ILKTKSEGRRLIEQNGMSLNDEKIKDVKFTLNDN 388


>gi|237740961|ref|ZP_04571442.1| tyrosyl-tRNA synthetase [Fusobacterium sp. 4_1_13]
 gi|229431005|gb|EEO41217.1| tyrosyl-tRNA synthetase [Fusobacterium sp. 4_1_13]
          Length = 406

 Score =  477 bits (1228), Expect = e-132,   Method: Composition-based stats.
 Identities = 166/392 (42%), Positives = 241/392 (61%), Gaps = 6/392 (1%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M    ++   +L ERG++ Q+++  E+  +  +  VT YIG+D TA SLH GH   +M +
Sbjct: 1   MEEKMANVYDVLKERGYLKQLTHEEEIREILGKEKVTFYIGFDPTADSLHVGHFIAMMFM 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             +Q+ GH+PI+L GGGT +IGDPS R + R MM  + I  N+E IK     FI +   K
Sbjct: 61  AHMQQHGHRPIALAGGGTGMIGDPSGRSDMRTMMTVEMIDHNVECIKKQMQKFIDFSDDK 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
             A++ NN  WL ++ YI+ LR++G  FSVNRML+ E  +SR+  E  LSFLEFNYMI+Q
Sbjct: 121 --AILANNADWLRNLNYIEFLRDVGEHFSVNRMLAAECYKSRM--ENGLSFLEFNYMIMQ 176

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDF  L   Y+C +Q+GG DQW N+I G++L  R      +A+T  LLT + G KMGKT
Sbjct: 177 AYDFYVLNHKYNCTMQLGGDDQWSNMIAGVELLRRKDRKSAYAMTCTLLTNSEGKKMGKT 236

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
             GA+WL+ + T+PY F+QYWRNIDD DV      LT LPM E+ R+  L+  EINEAKK
Sbjct: 237 AKGALWLDPKKTTPYEFYQYWRNIDDQDVEKCLALLTFLPMDEVRRLGALKDAEINEAKK 296

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           ++A E+T ++HG EEA KA       F    +  + P I ++ ++ S+   LL ++V+  
Sbjct: 297 VLAYEVTKIIHGEEEATKAKETTEALFGSGNNLDNAPKIEVTDEDFSKE--LLDVLVEKK 354

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
              + +E RR ++ N + +N+  I + K  + 
Sbjct: 355 ILKTKSEGRRLIEQNGMSLNDEKIKDVKFTLN 386


>gi|169629440|ref|YP_001703089.1| tyrosyl-tRNA synthetase (TyrS) [Mycobacterium abscessus ATCC 19977]
 gi|169241407|emb|CAM62435.1| Tyrosyl-tRNA synthetase (TyrS) [Mycobacterium abscessus]
          Length = 437

 Score =  477 bits (1228), Expect = e-132,   Method: Composition-based stats.
 Identities = 148/424 (34%), Positives = 228/424 (53%), Gaps = 16/424 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S  L  L+ RG I Q ++   L    ++G ++ Y G+D TA+SLHAGHL  L+ L   Q+
Sbjct: 13  SSILDELTWRGLIAQTTDRDALAADIAKGPISVYGGFDPTAASLHAGHLVPLLTLSRFQR 72

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+PI L GG T +IGDP    E R +  +  + E  ++I+G    F+++    T A++
Sbjct: 73  AGHRPIVLAGGATGLIGDPRDTSE-RNLHGTDVVAEWADRIRGQLERFVEFNDTPTGAIV 131

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
            NN  W   +  ++ LR++G  FSVN ML  +++R RL+    +S+ EF+YM+LQA D+V
Sbjct: 132 ANNLEWTGQLTALEFLRDLGKHFSVNVMLDRDTIRRRLE-GDGISYTEFSYMLLQANDYV 190

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT-LSGA 244
           +L + Y C LQ+GGSDQWGNI+ G+ L  +     + ALT PL+T A GTK GK+   G 
Sbjct: 191 QLHRKYGCSLQIGGSDQWGNIVAGVRLARQQDGASVHALTVPLVTAADGTKFGKSTGGGN 250

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKII 302
           +WL+ EMTSPY ++QY+ N  DADVV + +  T L   EI  +     +      A++ +
Sbjct: 251 LWLDPEMTSPYAWYQYFINTADADVVRYLRWFTFLSAEEIGELETATTERAHERAAQRRL 310

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQ-HMPTISISKDEVSRGMG---------- 351
           A E+TT+VHG         A+   F      +    T++ +  E   G            
Sbjct: 311 AAEVTTLVHGESATLAVEHASGALFGRGDLDRLDEGTLTAALTEAGNGEPARIADGEPDT 370

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           ++ L+V +G + S   ARR +K   + +NN+ +  E       D+ + G + L  GK+N 
Sbjct: 371 IVDLLVSSGLSESKGAARRTVKEGGVYVNNTRVDAEDWTPGDGDYLTGGWLVLRRGKRNI 430

Query: 412 IICH 415
               
Sbjct: 431 AGVQ 434


>gi|260495313|ref|ZP_05815440.1| tyrosyl-tRNA synthetase [Fusobacterium sp. 3_1_33]
 gi|260197091|gb|EEW94611.1| tyrosyl-tRNA synthetase [Fusobacterium sp. 3_1_33]
          Length = 406

 Score =  477 bits (1228), Expect = e-132,   Method: Composition-based stats.
 Identities = 167/394 (42%), Positives = 242/394 (61%), Gaps = 6/394 (1%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M    ++   +L ERG++ Q+++  E+  +  +  VT YIG+D TA SLH GH   +M +
Sbjct: 1   MEEKMANVYDVLKERGYLKQLTHEEEIKEILGKEKVTFYIGFDPTADSLHVGHFIAMMFM 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             +Q+ GH+PI+L GGGT +IGDPS R + R MM  + I  N+E IK     FI +   K
Sbjct: 61  AHMQQHGHRPIALAGGGTGMIGDPSGRSDMRTMMTVEMIDHNVECIKKQMQKFIDFSDDK 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
             A++ NN  WL ++ YI+ LR++G  FSVNRML+ E  +SR+  E  LSFLEFNYMI+Q
Sbjct: 121 --AILANNADWLRNLNYIEFLRDVGEHFSVNRMLAAECYKSRM--ENGLSFLEFNYMIMQ 176

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDF  L   Y+C +Q+GG DQW N+I G++L  R      +A+T  LLT + G KMGKT
Sbjct: 177 AYDFYVLNHKYNCTMQLGGDDQWSNMIAGVELLRRKDRKSAYAMTCTLLTNSEGKKMGKT 236

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
             GA+WL+ + T+PY F+QYWRNIDD DV +    LT LPM E+ R+  L+  EINEAKK
Sbjct: 237 AKGALWLDPKKTTPYEFYQYWRNIDDQDVENCLALLTFLPMDEVRRLGALKDAEINEAKK 296

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           ++A E+T ++HG EEA KA  A    F    +  + P I ++ ++ S+   LL ++V   
Sbjct: 297 VLAYEVTKIIHGEEEATKAKEATEALFGSGNNLDNAPKIEVTDEDFSKE--LLDVLVDRK 354

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
              + +E RR ++ N + +N+  I + K  +   
Sbjct: 355 IIKTKSEGRRLIEQNGMSLNDEKIKDVKFTLNDN 388


>gi|229824532|ref|ZP_04450601.1| hypothetical protein GCWU000282_01876 [Catonella morbi ATCC 51271]
 gi|229785903|gb|EEP22017.1| hypothetical protein GCWU000282_01876 [Catonella morbi ATCC 51271]
          Length = 422

 Score =  477 bits (1227), Expect = e-132,   Method: Composition-based stats.
 Identities = 152/422 (36%), Positives = 227/422 (53%), Gaps = 21/422 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L+ RG I+Q +N + L+ L ++  +  Y G D T  S+H GHL   M+L   Q  G
Sbjct: 3   ILDDLTWRGAINQQTNAQGLEELVNKKAIGLYCGVDPTGDSMHIGHLIPFMILKRFQLAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSS-FIKYGTGKTDALML 126
           HKP+ L+GGGT  IGDPS R+  R +     ++EN  K+    +  F+K     +   ++
Sbjct: 63  HKPVVLIGGGTGSIGDPSGRNSERTLQTMDVVKENARKLADQMNRLFLKGDVQASGFRIV 122

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  I  +D LR+ G  F++N ML+ + V SRL  E  +SF EF+Y ILQ+ DF  
Sbjct: 123 NNYDWLSQISLLDFLRDYGKHFNINNMLAKDVVASRL--EVGISFTEFSYQILQSIDFAH 180

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSGA 244
           L K YD +LQ+GG+DQWGNI  G+D   R +    +++ LT PL+  + GTK GKT  GA
Sbjct: 181 LYKEYDVQLQIGGADQWGNITAGLDFIRRTEGHETEVYGLTIPLMLKSDGTKFGKTAGGA 240

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKII 302
           +WL+ E T+P+ F+Q+W N  D DVV F K  T L   EID +A        +  A K +
Sbjct: 241 VWLDPEKTTPFEFYQFWLNQQDGDVVKFLKYFTFLSHEEIDALAVEIETQPHLRVAHKRL 300

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGL 352
           A E+T  VHG+E  ++A       F   + S          ++MP  S +++E +  + L
Sbjct: 301 AEEVTRFVHGQEALDEAIRITEALFTGEVGSLTVHEIEQGFRNMPQASAAREEANLAVWL 360

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           +      G   S  EAR  + + AI +N + +++ +  I  QD      + +  GKKN+ 
Sbjct: 361 VD----TGIVKSRREAREFISNGAITLNGTKVTDVEAVITPQDAIGGKYVVVRRGKKNYT 416

Query: 413 IC 414
           + 
Sbjct: 417 LV 418


>gi|237743205|ref|ZP_04573686.1| tyrosyl-tRNA synthetase [Fusobacterium sp. 7_1]
 gi|229433501|gb|EEO43713.1| tyrosyl-tRNA synthetase [Fusobacterium sp. 7_1]
          Length = 406

 Score =  477 bits (1227), Expect = e-132,   Method: Composition-based stats.
 Identities = 167/394 (42%), Positives = 242/394 (61%), Gaps = 6/394 (1%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M    ++   +L ERG++ Q+++  E+  +  +  VT YIG+D TA SLH GH   +M +
Sbjct: 1   MEEKMANVYDVLKERGYLKQLTHEEEIREILGKEQVTFYIGFDPTADSLHVGHFIAMMFM 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             +Q+ GH+PI+L GGGT +IGDPS R + R MM  + I  N+E IK     FI +   K
Sbjct: 61  AHMQQHGHRPIALAGGGTGMIGDPSGRTDMRTMMTVEMIDHNVECIKKQMQKFIDFSDDK 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
             A++ NN  WL ++ YI+ LR++G  FSVNRML+ E  +SR+  E  LSFLEFNYMI+Q
Sbjct: 121 --AILANNADWLRNLNYIEFLRDVGEHFSVNRMLAAECYKSRM--ENGLSFLEFNYMIMQ 176

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDF  L   Y+C +Q+GG DQW N+I G++L  R      +A+T  LLT + G KMGKT
Sbjct: 177 AYDFYVLNHKYNCTMQLGGDDQWSNMIAGVELLRRKDRKSAYAMTCTLLTNSEGKKMGKT 236

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
             GA+WL+ + T+PY F+QYWRNIDD DV      LT LPM E+ R+  L+  EINEAKK
Sbjct: 237 AKGALWLDPKKTTPYEFYQYWRNIDDQDVEKCLALLTFLPMDEVRRLGALKDAEINEAKK 296

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           ++A E+T ++HG EEA KA  A    F    +  + P I ++ ++ S+   LL ++V+  
Sbjct: 297 VLAYEVTKIIHGEEEATKAKEATEALFGSGNNLDNAPKIEVTDEDFSKE--LLDILVERK 354

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
              + +E RR ++ N + +N+  I + K  +   
Sbjct: 355 ILKTKSEGRRLIEQNGMSLNDEKIKDVKFTLNDN 388


>gi|282852519|ref|ZP_06261861.1| tyrosine--tRNA ligase [Lactobacillus gasseri 224-1]
 gi|282556261|gb|EFB61881.1| tyrosine--tRNA ligase [Lactobacillus gasseri 224-1]
          Length = 420

 Score =  477 bits (1227), Expect = e-132,   Method: Composition-based stats.
 Identities = 150/423 (35%), Positives = 218/423 (51%), Gaps = 17/423 (4%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQ-GVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           K D L  L  RG I+Q ++   L    ++   +  Y G D T  SLH GHL   M+L   
Sbjct: 3   KFDILEDLKWRGAINQETDEEGLRKYLAEHDDLALYCGTDPTGDSLHIGHLIPFMILKRF 62

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q  G+ P+ L+GGGT  IGDPS R   R +  +++++ N EK+            G  + 
Sbjct: 63  QMAGYHPVILIGGGTGSIGDPSGRKTERVLQTAEQVKHNEEKLTTQMKKLF----GTENF 118

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            + NN  WL  +  ID LR+ G FF VN M++ + V SRL  E  +SF EF+Y ILQA D
Sbjct: 119 EIKNNAEWLGKLNLIDFLRDYGKFFQVNNMINKDVVASRL--ENGISFTEFSYQILQAID 176

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTL 241
           F  L K+   +LQ+GGSDQWGNI  GIDL  +L+      F LT PL+  A GTK GK+ 
Sbjct: 177 FYHLNKDNGVQLQIGGSDQWGNITAGIDLIHKLEGQERPAFGLTIPLMLKADGTKFGKSA 236

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAK 299
            GA+WL+ E TSPY F+Q+W N DD DVV + K  T L   EI+ +A+   KE     A+
Sbjct: 237 GGAVWLDPEKTSPYEFYQFWINQDDRDVVKYLKYFTFLSREEIEDLAEKTEKEPWKRAAQ 296

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRGMGLL 353
           K +A E+T  VHG E  ++A       F  ++ S  +P I        S +       ++
Sbjct: 297 KRLAEEVTKFVHGEEGLKEAQMITEALFSGNVKSLSVPQIEQALKNAPSAEATHEAKNIV 356

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
             +V+     S  +AR  +K+ AI +N    ++    I+  +      + +   K+ + +
Sbjct: 357 EFLVETKIEPSKRQAREDVKNGAIYVNGERQNDIDFIIEPDNDFDGKYVIIRKSKRKYTL 416

Query: 414 CHL 416
             +
Sbjct: 417 VKI 419


>gi|254503054|ref|ZP_05115205.1| tyrosyl-tRNA synthetase [Labrenzia alexandrii DFL-11]
 gi|222439125|gb|EEE45804.1| tyrosyl-tRNA synthetase [Labrenzia alexandrii DFL-11]
          Length = 425

 Score =  477 bits (1227), Expect = e-132,   Method: Composition-based stats.
 Identities = 189/413 (45%), Positives = 275/413 (66%), Gaps = 3/413 (0%)

Query: 2   PAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
              KS+ L++L ERG +HQ ++   LD   + G +TAY G+D TA+SLH GHL  LM L 
Sbjct: 13  TKLKSEALAVLLERGLVHQSTDLEALDKRLNDGPITAYAGFDATAASLHVGHLMPLMTLR 72

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKT 121
           WLQ+ GH+PI ++GGGTS +GDPSFR+++R ++  ++I  N+  I+      +    G  
Sbjct: 73  WLQRLGHRPIVVLGGGTSQVGDPSFRNDARPLLEERQIAANMATIRRSVERLVDM-DGTE 131

Query: 122 DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA 181
            AL+++N  WL   ++++ LR+ GS F+VNRM++F+SV+SRL  +  L+ LEF YM+LQA
Sbjct: 132 GALLVDNAEWLNEFRFLEFLRDYGSQFTVNRMMTFDSVKSRLDAQMPLTILEFCYMMLQA 191

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            DF+ELAK +DC LQ+GGSDQWGNI+ G++LG R    KL  LT PLLTTA+G+KMGKT 
Sbjct: 192 VDFLELAKRHDCVLQVGGSDQWGNIVNGVELGRR-DGRKLHGLTVPLLTTANGSKMGKTA 250

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKI 301
           SGA+WL+ E  SP+ FWQ+WRN  DADV  F +  T LPM E++R+++LQG E+NEAKKI
Sbjct: 251 SGAVWLHPEHLSPFGFWQFWRNTADADVGKFLRLFTELPMREVERLSELQGAELNEAKKI 310

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGF 361
           +AT++T +VHG EEA  A       F         PT +++   ++ G+GLL L+V +GF
Sbjct: 311 LATQVTAIVHGPEEARVALEQGDALFSGDAELTE-PTHTMALSVLAEGVGLLELVVASGF 369

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           A S  EARR ++   +++NN ++ + + +I   D  +   + LS GK+   + 
Sbjct: 370 AASNGEARRLVEGGGVRLNNRVVDDARRRISSGDLGANDRLSLSVGKRCKALI 422


>gi|302341738|ref|YP_003806267.1| tyrosyl-tRNA synthetase [Desulfarculus baarsii DSM 2075]
 gi|301638351|gb|ADK83673.1| tyrosyl-tRNA synthetase [Desulfarculus baarsii DSM 2075]
          Length = 410

 Score =  477 bits (1227), Expect = e-132,   Method: Composition-based stats.
 Identities = 181/408 (44%), Positives = 252/408 (61%), Gaps = 2/408 (0%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +     + RGFI Q S+ + L  L     VT YIG+D TA+SLH G L  ++ L  LQ+ 
Sbjct: 2   NLYDTYASRGFIEQCSDAQALRQLFQTERVTGYIGFDPTATSLHVGSLVPIISLMHLQRA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+P+ L+GGGT ++GDPS + E R+++  ++I +N+  ++   S F+ +G G   A M+
Sbjct: 62  GHRPLVLVGGGTGMVGDPSGKTEMRKLLTIEQISQNVAALQNQLSRFLDFGPG--QAQMI 119

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  + YI+ LR+ G  FSVNRML  ESV+ RL +E  LSF+EFNYMILQAYDF+ 
Sbjct: 120 NNADWLLKLNYIEFLRDTGRHFSVNRMLQQESVKLRLAQETGLSFIEFNYMILQAYDFMY 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L+   DC+LQMGG+DQWGNI+ GIDL  R+    +  LT PLLTTASG KMGKT +GAIW
Sbjct: 180 LSHAMDCKLQMGGNDQWGNIVMGIDLARRVHGNTVHGLTFPLLTTASGQKMGKTHAGAIW 239

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           L+ E TSPY F+QYW N  D DV  F K  T LP+ +I  +A LQG  IN+AK+ +A E+
Sbjct: 240 LDPERTSPYEFYQYWVNTHDQDVERFLKLFTFLPLDQIAELAALQGAAINQAKQTLAREV 299

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
           TT+VHG++ A +A  AA   F     +  +P  +I +  +  G+   +L+V+ G A +++
Sbjct: 300 TTIVHGQQAAAEAQAAAQAAFAGQGDADGVPATNIDRATLQAGLPAFSLLVQTGLAKTSS 359

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +ARR +      +  + I      I L   +  G I L  GKK H   
Sbjct: 360 DARRLISQGGAYVGQNRIDAFDQIISLAHANPDGAIWLRAGKKKHHRI 407


>gi|254456480|ref|ZP_05069909.1| tyrosyl-tRNA synthetase [Candidatus Pelagibacter sp. HTCC7211]
 gi|207083482|gb|EDZ60908.1| tyrosyl-tRNA synthetase [Candidatus Pelagibacter sp. HTCC7211]
          Length = 409

 Score =  476 bits (1226), Expect = e-132,   Method: Composition-based stats.
 Identities = 197/410 (48%), Positives = 279/410 (68%), Gaps = 4/410 (0%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           FL    +RGF +Q +N  EL  L  +  +  YIG+D TA SLH G L Q+M L  LQK G
Sbjct: 4   FLKEFKDRGFFYQCTNETELSDLMDKEKIKGYIGFDCTAESLHVGSLLQIMCLRLLQKNG 63

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+PI L+GGGT+ IGDPS +D++R+++   EI++NIE I+ I   F+      T  + +N
Sbjct: 64  HRPIVLLGGGTTRIGDPSGKDKTRKILDEDEIEKNIENIQNILKKFLDNDNSDTKPIFVN 123

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N TWL  + YI  LR+IG  F++N+ML+F+SV++RL+REQSLS++EFNYMILQAYDF+EL
Sbjct: 124 NYTWLKDLNYISFLRDIGKHFTINKMLTFDSVKTRLEREQSLSYMEFNYMILQAYDFLEL 183

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            KN +C LQ+GGSDQWGNI+ G+DL ++    + F LT+PL+T ASG KMGKT +GAIWL
Sbjct: 184 NKNENCALQIGGSDQWGNIVNGVDLIKKYSNKQGFGLTTPLITLASGAKMGKTENGAIWL 243

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           +++    Y++WQ+WRN DD DVV F K  T L   EI  + K++ K+INE K ++A E T
Sbjct: 244 DEKYLPAYDYWQFWRNTDDRDVVKFLKFFTDL---EIAEINKVKEKDINELKTLLANEAT 300

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
           TM+HG++ A+++  AA E F  +    + P+I ISK++  + +G++ L++ +    S +E
Sbjct: 301 TMLHGQKAAKESEQAAREAFSGNSLGSNSPSIKISKEDFEKKLGIIDLVILSKLENSKSE 360

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            RR +K NAIKIN+ IIS+EKL I   DF     +KLS GKK H+   + 
Sbjct: 361 IRRLIKGNAIKINDEIISDEKLIIN-HDFFKEDYLKLSIGKKRHLKILIS 409


>gi|294784436|ref|ZP_06749727.1| tyrosine--tRNA ligase [Fusobacterium sp. 3_1_27]
 gi|294488008|gb|EFG35363.1| tyrosine--tRNA ligase [Fusobacterium sp. 3_1_27]
          Length = 406

 Score =  476 bits (1226), Expect = e-132,   Method: Composition-based stats.
 Identities = 167/392 (42%), Positives = 242/392 (61%), Gaps = 6/392 (1%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M    ++   +L ERG++ Q+++  E+  +  +  VT YIG+D TA SLH GH   +M +
Sbjct: 1   MEEKMANVYDVLKERGYLKQLTHEEEIREILGKEKVTFYIGFDPTADSLHVGHFIAMMFM 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             +Q+ GH+PI+L GGGT +IGDPS R + R MM  + I  N+E IK     FI +   K
Sbjct: 61  AHMQQHGHRPIALAGGGTGMIGDPSGRSDIRTMMTVEMIDHNVECIKKQMQKFIDFSDDK 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
             A++ NN  WL ++ YI+ LR++G  FSVNRML+ E  +SR+  E  LSFLEFNYMI+Q
Sbjct: 121 --AILANNADWLRNLNYIEFLRDVGEHFSVNRMLAAECYKSRM--ENGLSFLEFNYMIMQ 176

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDF  L   Y+C +Q+GG DQW N+I G++L  R      +A+T  LLT + G KMGKT
Sbjct: 177 AYDFYVLNHKYNCTMQLGGDDQWSNMIAGVELLRRKDRKSAYAMTCTLLTNSEGKKMGKT 236

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
             GA+WL+ + T+PY F+QYWRNIDD DV      LT LPM E+ R+  L+  EINEAKK
Sbjct: 237 AKGALWLDPKKTTPYEFYQYWRNIDDQDVEKCLALLTFLPMDEVRRLGALKDAEINEAKK 296

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           ++A E+T ++HG EEA KA  A    F    +  + P I ++ ++ S+   LL ++V   
Sbjct: 297 VLAYEVTKIIHGEEEATKAKEATEALFGSGNNLDNAPKIEVTDEDFSKE--LLDVLVDRK 354

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
              + +E RR ++ N + +N+  I++ K  + 
Sbjct: 355 IIKTKSEGRRLIEQNGMSLNDMKITDVKFTLN 386


>gi|167754077|ref|ZP_02426204.1| hypothetical protein ALIPUT_02365 [Alistipes putredinis DSM 17216]
 gi|167658702|gb|EDS02832.1| hypothetical protein ALIPUT_02365 [Alistipes putredinis DSM 17216]
          Length = 431

 Score =  476 bits (1226), Expect = e-132,   Method: Composition-based stats.
 Identities = 142/428 (33%), Positives = 224/428 (52%), Gaps = 22/428 (5%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
            +F+  L  RG IH I           + + TAY+G D TA SLH GHL  +M+L   Q 
Sbjct: 4   KNFVEELEWRGMIHSIMPGT--QEQLQKEMSTAYVGIDPTADSLHIGHLVSVMILKHFQM 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG-TGKTDAL 124
            GH+PI+L+GG T +IGDPS + + R ++  + ++ N E IK   +  + +       A+
Sbjct: 62  CGHRPIALVGGATGMIGDPSGKSQERNLLDEKTLRHNQEAIKKQLAKLLDFESDAPNAAM 121

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK-REQSLSFLEFNYMILQAYD 183
           ++NN  W+  I ++D +R+IG   +VN M++ +SV+ R     + +SF EF Y ++QAYD
Sbjct: 122 LVNNYDWMKGITFLDFIRDIGKLITVNYMMAKDSVKKRFNGEGEGMSFTEFTYQLVQAYD 181

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ L +   C+LQ+GG+DQWGNI  G +L  R    + FALT PL+T A GTK GKT SG
Sbjct: 182 FLHLYETVGCKLQLGGADQWGNITTGTELIRRKAGGEAFALTCPLITKADGTKFGKTESG 241

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKKI 301
            +WL+   TSPY F+Q+W N  D D   + K  T L    ID +         +   +K 
Sbjct: 242 NVWLDPRYTSPYKFYQFWLNTSDEDAKRYIKIFTLLDKQTIDDLIAEHDAAPHLRILQKR 301

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDEVS 347
           +A E+T M+H +EE EKA  A+   F  +                 + +P   I++ E+ 
Sbjct: 302 LAQEVTVMIHSQEEYEKAVEASNILFGGATSEALRKLDEQTLLQVFEGVPQYKIARAEL- 360

Query: 348 RGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+  + L  + +    S  E R+ +++  + +N   +++    I   D      + +  
Sbjct: 361 IGLPFIELCAERSDIFPSKGECRKMVQAGGVSLNKEKVADPMRAIAESDLIDGKYLLVQK 420

Query: 407 GKKNHIIC 414
           GKKN+ + 
Sbjct: 421 GKKNYYLV 428


>gi|315656493|ref|ZP_07909382.1| tyrosine--tRNA ligase [Mobiluncus curtisii subsp. holmesii ATCC
           35242]
 gi|315493052|gb|EFU82654.1| tyrosine--tRNA ligase [Mobiluncus curtisii subsp. holmesii ATCC
           35242]
          Length = 425

 Score =  476 bits (1226), Expect = e-132,   Method: Composition-based stats.
 Identities = 143/413 (34%), Positives = 229/413 (55%), Gaps = 11/413 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           SD +  L+ RG I Q ++   L    S+G +T Y G+D TA+SLH GHL QL+++  LQ 
Sbjct: 7   SDLIDKLTWRGLIKQHTDMDALRRALSEGPLTFYCGFDPTAASLHHGHLVQLIMMRHLQL 66

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH PI+L+GG T +IGDP      R++   + +    ++++     F+ +  G   A M
Sbjct: 67  AGHHPIALVGGATGLIGDPRM-TAERQLQDKETVAGWADRLQCQIERFLDF-EGGNPARM 124

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  W   +  IDLLR++G  F +  ML+ ++V  RLK ++ +SF EF+Y ILQA D++
Sbjct: 125 VNNLEWTAPLSAIDLLRDLGKNFRMGTMLAKDAVARRLKSDEGISFTEFSYQILQANDYL 184

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           +L + Y   L+ GG+DQWGN++ G+DL  +++   +  +T+PL+T + GTK GK+  GAI
Sbjct: 185 QLYRKYGVTLETGGNDQWGNLVGGMDLIRKIEGKDVHVMTTPLITKSDGTKFGKSEGGAI 244

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIA 303
           WL+ EM SPY F+Q+W N +DADVV+  K  T L   EI+       +      A++ +A
Sbjct: 245 WLDPEMFSPYAFYQFWLNTEDADVVNLLKVFTFLSRGEIEALETETKENPGKRAAQRALA 304

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQ------HMPTISISKDEVSRG-MGLLTLI 356
             +TT+VHG ++ E+   A+   F      +         T+ + + +V  G   +L L+
Sbjct: 305 EAVTTLVHGADQTERVKAASTALFGRGDLREVDGKTLVAATVDLPRTQVVLGQTNILHLL 364

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
           V +G       A+R + S    +NN  + +E   I  +D    G +    GK+
Sbjct: 365 VDSGLEKGIGAAKRTVASGGAYLNNEKVEDEGRVITAEDVLPGGVVLFRKGKR 417


>gi|317124689|ref|YP_004098801.1| tyrosyl-tRNA synthetase [Intrasporangium calvum DSM 43043]
 gi|315588777|gb|ADU48074.1| tyrosyl-tRNA synthetase [Intrasporangium calvum DSM 43043]
          Length = 420

 Score =  476 bits (1226), Expect = e-132,   Method: Composition-based stats.
 Identities = 143/418 (34%), Positives = 221/418 (52%), Gaps = 10/418 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +D    L  RG + Q ++   L    ++G +T Y G+D TA SLH G+L QL++L   Q+
Sbjct: 2   TDIFDELQWRGLVAQSTDEAALREALAEGPLTLYCGFDPTAPSLHFGNLVQLVVLRRFQR 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH  I L+GG T +IGDP    E R +   ++   N+ +IK +   F+ +  G   A++
Sbjct: 62  AGHHVICLVGGSTGLIGDPRPTSE-RVLKTKEQTASNVARIKALVQPFLDF-DGANAAIL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           ++N  W  S+  +D LR++G  F VN+M+  E++ +RL+ ++ +S+ EF+Y +LQA DF 
Sbjct: 120 VDNLDWTASLTALDFLRDVGKHFRVNQMVKKEAISARLESQEGISYTEFSYQLLQALDFR 179

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L + Y C LQ GGSDQWGN+  G+DL  R +   +   T+PLL  + GTK GK+   A+
Sbjct: 180 HLYRTYGCTLQTGGSDQWGNLTAGVDLIHRSEGASVHCFTTPLLVDSGGTKFGKSEGNAV 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIA 303
           WL+ +MTSPY+F+QY+ NI+DA VVS  K  T L   EI  + +   +E     A+K +A
Sbjct: 240 WLSADMTSPYSFYQYFLNIEDASVVSMLKVFTDLGQDEIAELERQVKEEPFRRAAQKALA 299

Query: 304 TEITTMVHGREEAEKAATAAMECFDMS------IHSQHMPTISISKDEVSRGMGLLTLIV 357
            +ITT+VHG +       A+   F           +    T  +    +  G   +  +V
Sbjct: 300 GDITTLVHGADATAAVQAASEALFGKGELHGLDASTLTDATAELPGARIEVGTSFVDALV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            AG   S N ARR +      +NN  +S+    +   DF       L  G+K+     
Sbjct: 360 AAGLVDSRNAARRAIADGGASLNNVKVSDPDRILGDDDFLHGTVAVLKRGRKSLAAAR 417


>gi|85374010|ref|YP_458072.1| tyrosyl-tRNA synthetase [Erythrobacter litoralis HTCC2594]
 gi|84787093|gb|ABC63275.1| tyrosyl-tRNA synthetase [Erythrobacter litoralis HTCC2594]
          Length = 409

 Score =  476 bits (1226), Expect = e-132,   Method: Composition-based stats.
 Identities = 188/414 (45%), Positives = 273/414 (65%), Gaps = 7/414 (1%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  F+SD L +LSERG +HQI++   LD L  + VVT Y+G+D TA SLH G+L  +MLL
Sbjct: 1   MSEFESDLLQLLSERGHLHQITDAGALDALAMKEVVTGYVGFDPTAPSLHIGNLASIMLL 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             LQ+ GH+PI +MGGGT+ +GDPS RDE+R M+  +++  NI  IKG F   +++   +
Sbjct: 61  KRLQQAGHRPIVIMGGGTAKVGDPSGRDETRTMLTDEKLAGNIASIKGSFEQILRFDDSE 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           T AL++NN+ WL  + YI+LLR++G  F++NRML+F+SV+ RL REQ L+FLEFNYMI+Q
Sbjct: 121 TGALLINNDDWLNELGYIELLRDVGPHFTINRMLTFDSVKLRLDREQPLTFLEFNYMIMQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYD++ L + Y CRLQ+GGSDQWGNI+ GI+L  R+   +++ +T+PL+T A G KMGK+
Sbjct: 181 AYDYLVLNREYGCRLQLGGSDQWGNIVNGIELCRRIDGKEVYGVTAPLITRADGAKMGKS 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           + GA+WLN+     Y+FWQYWRN DD DV  F +  T LP+ EI R+ +L+G  IN+AK 
Sbjct: 241 VDGAVWLNEAQLPAYDFWQYWRNTDDRDVGRFLRLFTDLPLDEIARLEQLEGAAINDAKI 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           ++A E+T MV G + A  A   A + F      + +PT+++ ++E    M L  ++   G
Sbjct: 301 VLANEVTAMVRGADAARSAEATAAQTFAGGGAGEDLPTLTLGEEE----MSLPAVLTAIG 356

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           F  S  EA+R +   A+K++     +    I L +      IK+S GKK H + 
Sbjct: 357 FTRSNGEAKRKIAEGAVKLDGEATRDPGAMIALAE---GAEIKISLGKKRHGLL 407


>gi|330836945|ref|YP_004411586.1| tyrosyl-tRNA synthetase [Spirochaeta coccoides DSM 17374]
 gi|329748848|gb|AEC02204.1| tyrosyl-tRNA synthetase [Spirochaeta coccoides DSM 17374]
          Length = 418

 Score =  476 bits (1226), Expect = e-132,   Method: Composition-based stats.
 Identities = 175/414 (42%), Positives = 247/414 (59%), Gaps = 11/414 (2%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L IL +RGFI   ++   L  L  +  VT Y+G D +  S+H GH+     +  +Q+ GH
Sbjct: 5   LQILHDRGFIKACTDSDALSDLMDKEPVTFYVGVDPSGRSIHIGHMVPFFAMHHMQEAGH 64

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT----GKTDAL 124
            PI+L+GGGT +IGDPS + E R+M+  ++I  N   IK    + I +      G   A 
Sbjct: 65  NPIALVGGGTGMIGDPSGKTELRKMLTHEQIAANSASIKKQLGTVIDFAEMPPNGLGRAQ 124

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M+NN  WL  + YID LREIGS FSVNRML+FES + RL+R   LSF+EFNY +LQ+YDF
Sbjct: 125 MVNNADWLLGLNYIDFLREIGSQFSVNRMLTFESYKQRLER--GLSFIEFNYQLLQSYDF 182

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           + L + + CRLQMGG DQWGNI+ GIDL  R+++ + + LT  L+  A G KMGK+  GA
Sbjct: 183 LTLYRTHGCRLQMGGDDQWGNIVAGIDLIRRMESAECYGLTFNLIMRADGKKMGKSEKGA 242

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           ++L+ +M SPY+F+QYWRN++DADV  F K  T LP+ EID  AK  G  INE K+ +A 
Sbjct: 243 VFLDPDMYSPYDFYQYWRNVNDADVFKFMKLFTFLPLEEIDDYAKP-GVNINEVKERLAW 301

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHS----QHMPTISISKDEVSRGMGLLTLIVKAG 360
           E T ++HG+EEA+KA  AA   F  +  +    + MP++ I  D ++ G+  L L V++ 
Sbjct: 302 EQTRIIHGQEEADKARDAAKAAFGSTGANPAAREGMPSMEIPADRLASGIPALELFVESK 361

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
              S ++ RR +      +N + I +    I     D  G + L  GKK     
Sbjct: 362 LVPSNSDGRRLIAGGGAHVNETKIESHDQVIDSSWRDEQGELILRSGKKKFFRI 415


>gi|68535935|ref|YP_250640.1| tyrosyl-tRNA synthetase [Corynebacterium jeikeium K411]
 gi|97201322|sp|Q4JVY5|SYY_CORJK RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|68263534|emb|CAI37022.1| tyrS [Corynebacterium jeikeium K411]
          Length = 428

 Score =  476 bits (1226), Expect = e-132,   Method: Composition-based stats.
 Identities = 148/422 (35%), Positives = 231/422 (54%), Gaps = 15/422 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG I+Q ++   L    +Q  +T Y G+D T SSLHAGHL  L++L   Q+ 
Sbjct: 6   NIIDELQWRGLINQSTDLEALKEA-TQNPITLYCGFDPTGSSLHAGHLVPLIMLKRFQQF 64

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY---GTGKTDA 123
           GH+PI+L GG T +IGDP    E R M+  ++I EN+  IK    +F+ +       + A
Sbjct: 65  GHRPITLAGGATGMIGDPRDVGE-RSMLTEEQIGENMVAIKKQLEAFVDFTEDSDVDSPA 123

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           +M+NN  W+  +  I+ LR++G  FS+N ML  ++V+ RL+ +  +S+ EF+YM+LQA D
Sbjct: 124 VMVNNADWISQMNVIEYLRDVGKNFSLNTMLDRDTVKRRLESD-GISYTEFSYMLLQAND 182

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           +V L   +DC LQ+GG DQWGNI+ G+DL  R+   K+  LT PL+T A G K GK+  G
Sbjct: 183 YVHLHNEFDCVLQIGGGDQWGNIVSGVDLNRRVNGAKVHGLTVPLVTDAEGNKFGKSTGG 242

Query: 244 A-IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKK 300
             +WL+ ++TSPY+++QY+ N  D+ V+ + +  T L   EI  + +   +E    EA++
Sbjct: 243 GKLWLDPQLTSPYSWYQYFINAGDSVVIDYLRWFTFLSQEEIAELERKVAEEPFKREAQR 302

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQ-HMPTI-----SISKDEVSRGMGLLT 354
           ++A E+TT+VHG    E    AA   F  +       PT+          EV     +L 
Sbjct: 303 VLAREMTTLVHGAAATEAVELAAQALFGKAELQDLDEPTLASALQETEVAEVGADATILD 362

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           L+V++G   S   ARR +      +NN  I + +     ++      + L  GKK     
Sbjct: 363 LLVESGLEKSKGAARRTVGEGGAYVNNQRIEDIEWSPSAEELLHGSWLVLRKGKKRFAGA 422

Query: 415 HL 416
            +
Sbjct: 423 RV 424


>gi|54023959|ref|YP_118201.1| tyrosyl-tRNA synthetase [Nocardia farcinica IFM 10152]
 gi|81375263|sp|Q5YYA4|SYY_NOCFA RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|54015467|dbj|BAD56837.1| putative tyrosyl-tRNA synthetase [Nocardia farcinica IFM 10152]
          Length = 429

 Score =  476 bits (1226), Expect = e-132,   Method: Composition-based stats.
 Identities = 148/419 (35%), Positives = 225/419 (53%), Gaps = 17/419 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D +  L+ RG I Q ++   L    + G +T Y G+D TA+SLHAGHL  L+ L   Q+ 
Sbjct: 4   DIIDELTWRGLIAQSTDLDALRAALAAGPLTLYAGFDPTAASLHAGHLVPLLALKRFQRA 63

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI L GG T +IGDP    E R M  S  + E   +I+     F+      T A+++
Sbjct: 64  GHRPIVLAGGATGLIGDPRDVGE-RTMNSSDTVAEWARRIRSQLERFVDLDDSPTGAVIV 122

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   +  +D LR+IG  FSVN ML+ ++V+ RL+    +S+ EF+YM+LQA D+V+
Sbjct: 123 NNMDWTGPLSAVDFLRDIGKHFSVNVMLARDTVKRRLE-GDGMSYTEFSYMLLQANDYVQ 181

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT-LSGAI 245
           L +++ CRLQ+GGSDQWGNII G++L  RL    + ALT PL+T+A G K GK+   G++
Sbjct: 182 LRRSFGCRLQVGGSDQWGNIIAGVELNRRLDGESVHALTVPLVTSADGKKFGKSTGGGSL 241

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIA 303
           WL+ EMTSPY ++QY+ N  DADVV + +  T L   E+  + +   +     EA++ +A
Sbjct: 242 WLDPEMTSPYAWYQYFVNTADADVVRYLRWFTFLDREELAELERATAERPHAREAQRRLA 301

Query: 304 TEITTMVHGREEAEKAATAAMECFDMS------------IHSQHMPTISISKDEVSRGMG 351
            E+TT+VHG +       A+   F                  +      +++        
Sbjct: 302 AEMTTLVHGEQHTRAVQLASQALFGRGDLRELDEATLGAALREAAGEGEVARVTPGEPAT 361

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
           ++ L+V  G A S   ARR +      +NN  I++        D+     + +  GK+N
Sbjct: 362 IVDLLVATGLAESRGAARRTVNEGGAAVNNQKIADPDWTPADGDYLHGRWLVVRRGKRN 420


>gi|256027617|ref|ZP_05441451.1| tyrosyl-tRNA synthetase [Fusobacterium sp. D11]
          Length = 402

 Score =  476 bits (1226), Expect = e-132,   Method: Composition-based stats.
 Identities = 166/389 (42%), Positives = 241/389 (61%), Gaps = 6/389 (1%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           ++   +L ERG++ Q+++  E+  +  +  VT YIG+D TA SLH GH   +M +  +Q+
Sbjct: 2   ANVYDVLKERGYLKQLTHEEEIREILGKEKVTFYIGFDPTADSLHVGHFIAMMFMAHMQQ 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+PI+L GGGT +IGDPS R + R MM  + I  N+E IK     FI +   K  A++
Sbjct: 62  HGHRPIALAGGGTGMIGDPSGRSDMRTMMTVEMIDHNVECIKKQMQKFIDFSDDK--AIL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
            NN  WL ++ YI+ LR++G  FSVNRML+ E  +SR+  E  LSFLEFNYMI+QAYDF 
Sbjct: 120 ANNADWLRNLNYIEFLRDVGEHFSVNRMLAAECYKSRM--ENGLSFLEFNYMIMQAYDFY 177

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L   Y+C +Q+GG DQW N+I G++L  R      +A+T  LLT + G KMGKT  GA+
Sbjct: 178 VLNHKYNCTMQLGGDDQWSNMIAGVELLRRKDRKSAYAMTCTLLTNSEGKKMGKTAKGAL 237

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
           WL+ + T+PY F+QYWRNIDD DV      LT LPM E+ R+  L+  EINEAKK++A E
Sbjct: 238 WLDPKKTTPYEFYQYWRNIDDQDVEKCLALLTFLPMDEVRRLGALKDAEINEAKKVLAYE 297

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           +T ++HG EEA KA  A    F    +  + P I ++ ++ S+   LL ++V      + 
Sbjct: 298 VTKIIHGEEEATKAKEATEALFGSGNNLDNAPKIEVTDEDFSKE--LLDVLVDRKIIKTK 355

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQ 394
           +E RR ++ N + +N+  I + K  +  +
Sbjct: 356 SEGRRLIEQNGMSLNDEKIKDVKFTLNDK 384


>gi|323258560|gb|EGA42227.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008283]
          Length = 388

 Score =  476 bits (1225), Expect = e-132,   Method: Composition-based stats.
 Identities = 151/386 (39%), Positives = 219/386 (56%), Gaps = 11/386 (2%)

Query: 39  YIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQE 98
           Y G+D TA SLH GHL  L+ L   Q+ GHKP++L+GG T +IGDPSF+   R++   + 
Sbjct: 1   YCGFDPTADSLHLGHLVPLLCLKRFQQAGHKPVALVGGATGLIGDPSFKAAERKLNTEET 60

Query: 99  IQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
           +QE + KI+   + F+ +  G+  A+  NN  W  S+  +  LR+IG  FSVN+M++ E+
Sbjct: 61  VQEWVAKIRKQVAPFLDFDCGENSAIAANNYDWFGSMNVLTFLRDIGKHFSVNQMINKEA 120

Query: 159 VRSRLKR-EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK 217
           V+ RL R +Q +SF EF+Y +LQ YDF  L K +   LQ+GGSDQWGNI  GIDL  RL 
Sbjct: 121 VKQRLNRDDQGISFTEFSYNLLQGYDFACLNKLHGVALQIGGSDQWGNITSGIDLTRRLH 180

Query: 218 TPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT 277
             ++F LT PL+T A GTK GKT  GA+WL+ + TSPY F+Q+W N  DADV  F K  T
Sbjct: 181 QNQVFGLTVPLITKADGTKFGKTEGGAVWLDPKKTSPYKFYQFWINTADADVYRFLKFFT 240

Query: 278 TLPMSEI---DRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS- 333
            + + EI   +   K  GK    A+ ++A ++T +VHG E    A       F  S+ + 
Sbjct: 241 FMDIEEINALEEEDKNSGKAPR-AQYVLAEQVTRLVHGEEGLVAAKRITECLFSGSLSAL 299

Query: 334 -----QHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEK 388
                + +    +   E+ +G  L+  +V A    S  +AR+ + SNA+ IN    S+ +
Sbjct: 300 SEADFEQLAQDGVPMVEMEKGADLMQALVDAELQPSRGQARKTIASNAVTINGEKQSDPE 359

Query: 389 LQIKLQDFDSTGNIKLSFGKKNHIIC 414
                +D        L  GKKN+ + 
Sbjct: 360 YIFNDEDRLFGRYTLLRRGKKNYCLI 385


>gi|171914524|ref|ZP_02929994.1| Tyrosyl-tRNA synthetase [Verrucomicrobium spinosum DSM 4136]
          Length = 433

 Score =  476 bits (1225), Expect = e-132,   Method: Composition-based stats.
 Identities = 138/432 (31%), Positives = 233/432 (53%), Gaps = 21/432 (4%)

Query: 7   DFLSILSERGFIHQIS-------NPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLML 59
           +    L  RG +   +       +   L    +   +T Y G+D TA SLH GH+  L+ 
Sbjct: 2   NIFEDLQFRGLVADFTSVPESRADLLPLPDRLAAKAITLYCGFDPTADSLHVGHIVPLLA 61

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG 119
           L   Q  GH PI++ GG T  IGDPS +   R+++  ++I+ N+E ++   +  + + + 
Sbjct: 62  LRRFQLAGHHPIAVAGGATGSIGDPSGKSAERQLLTQEQIKANVEAVRPQLAKLLDFDSP 121

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK-REQSLSFLEFNYMI 178
              A +++N  W+  I Y+D LR++G  F+VN+M++ ESVR+R++ R+  +S+ EF+YM+
Sbjct: 122 VNPARLMDNADWIGPISYLDFLRDVGKHFTVNQMVAKESVRARMEDRDVGISYTEFSYML 181

Query: 179 LQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMG 238
           LQ+YD+  LA+   C LQ+GGSDQWGNI  GIDL  +      + LT PL+T + GTK G
Sbjct: 182 LQSYDYFHLAQVAGCELQIGGSDQWGNITTGIDLVRKKLGRHAYGLTMPLITKSDGTKFG 241

Query: 239 KTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--N 296
           K+  GAIWL+ + TS Y F+Q+W N DD DVV + K  T LP  EI  +           
Sbjct: 242 KSEGGAIWLDPKKTSIYKFYQFWINSDDRDVVKYLKFFTFLPHDEIRALEAEHETNPGAR 301

Query: 297 EAKKIIATEITTMVHGREEAEKAATAAMECFDMSI----------HSQHMPTISISKDEV 346
           +A + +A  ITT++HG +    A  A+   F  S+           S+ +P  +++ D++
Sbjct: 302 KAHQALARSITTLIHGEQATSDAVRASEILFGGSLEGISASTLQTLSEEVPNATVTADQL 361

Query: 347 -SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLS 405
              G+ L+  +V +G + S  +AR+ ++   + +N    +    ++ +        + L 
Sbjct: 362 GGEGLPLVEALVLSGLSQSKGQARKDVEGGGVYVNGDRATAATDRLAVDRTLHGRYVLLR 421

Query: 406 FGKKNHIICHLC 417
            G++N+ +  + 
Sbjct: 422 KGRRNYALLSVA 433


>gi|223937057|ref|ZP_03628965.1| tyrosyl-tRNA synthetase [bacterium Ellin514]
 gi|223894338|gb|EEF60791.1| tyrosyl-tRNA synthetase [bacterium Ellin514]
          Length = 426

 Score =  476 bits (1225), Expect = e-132,   Method: Composition-based stats.
 Identities = 147/422 (34%), Positives = 230/422 (54%), Gaps = 14/422 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L  RG +   ++  EL    + G +T Y G+D T  SLH G+L  L+ L   Q  
Sbjct: 2   NIYEELEWRGLLADCTDKVELLKRLAAGPITLYAGFDPTGDSLHVGNLVPLLALRRFQLF 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH PI+L GG T  IGDPS +   R+++  + +  NI  IK      + +      A +L
Sbjct: 62  GHIPIALAGGATGSIGDPSGKTVERQLLTKEVLDTNIASIKVQLRRLLDFDAAANPARLL 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK-REQSLSFLEFNYMILQAYDFV 185
           +N TW   + Y+D LRE+G  FSVN M++ ESVR+R++ RE  +S+ EF+YM+LQA+DF 
Sbjct: 122 DNNTWTAPVSYLDFLREVGKHFSVNMMVAKESVRARMEDRETGISYTEFSYMLLQAFDFY 181

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L K ++C LQ+GGSDQWGNI  G DL  +  +  +F LT PL+T A G+K GK+++GAI
Sbjct: 182 HLRKEFNCELQIGGSDQWGNITAGSDLCRKKLSAHVFGLTLPLITNADGSKFGKSVAGAI 241

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIA 303
           W++ + TS Y F+Q+W N DD DV+ + K  T L   EI  + +          A K +A
Sbjct: 242 WVDAKKTSVYRFYQFWINTDDRDVIRYLKFFTFLTQDEITALEQQHTANPGARVAHKALA 301

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVS-RGMGL 352
             +T ++HG +   +A  A+   F   +              +PT  + K ++   G+ L
Sbjct: 302 KAMTDLIHGEQATTEAIRASEILFGGELSGISESTFNDIVGEVPTKDLEKSKLEGAGIPL 361

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           + L+V +G + S  +AR+ ++   + +NN   +N +  +   D     ++ L  GKKN+ 
Sbjct: 362 VELLVHSGLSPSKGQARKDIEGGGVNLNNVREANFQRPVTTSDLLFGKHLLLRKGKKNYT 421

Query: 413 IC 414
           + 
Sbjct: 422 VL 423


>gi|254302471|ref|ZP_04969829.1| tyrosine--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum
           ATCC 10953]
 gi|148322663|gb|EDK87913.1| tyrosine--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum
           ATCC 10953]
          Length = 402

 Score =  475 bits (1224), Expect = e-132,   Method: Composition-based stats.
 Identities = 166/389 (42%), Positives = 244/389 (62%), Gaps = 6/389 (1%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           ++   +L ERG++ Q+++  E+  +  +  VT YIG+D TA SLH GH   +M +  +Q+
Sbjct: 2   ANVYDVLKERGYLKQLTHEEEIKEILGKEKVTFYIGFDPTADSLHVGHFIAMMFMAHMQQ 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+PI+L GGGT +IGDPS R + R MM  + I  N+E IK     FI +   K  A++
Sbjct: 62  HGHRPIALAGGGTGMIGDPSGRSDMRTMMTVEMIDHNVECIKKQMQKFIDFSDDK--AIL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
            NN  WL ++ YI+ LR++G +FSVNRML+ E  +SR+  E  LSFLEFNYMI+QAYDF 
Sbjct: 120 ANNADWLRNLNYIEFLRDVGEYFSVNRMLAAECYKSRM--ENGLSFLEFNYMIMQAYDFY 177

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L   Y+C +Q+GG DQW N+I G++L  R      +A+T  LLT + G KMGKT  GA+
Sbjct: 178 VLNHKYNCTMQLGGDDQWSNMIAGVELLRRKDRKPAYAMTCTLLTNSEGKKMGKTAKGAL 237

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
           WL+ + T+PY F+QYWRNIDD DV +    LT LPM E+ R+  L+  EINEAKK++A E
Sbjct: 238 WLDPKKTTPYEFYQYWRNIDDQDVENCLALLTFLPMDEVRRLGALKDAEINEAKKVLAYE 297

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           +T ++HG EEA KA  A    F    +  + P I ++ ++ S+   LL ++V+     + 
Sbjct: 298 VTKIIHGEEEATKAKEATEALFGNGNNLDNAPKIEVTDEDFSKE--LLDVLVERKILKTK 355

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQ 394
           +E RR ++ N + +N+  I + K  +  +
Sbjct: 356 SEGRRLIEQNGMSLNDEKIKDVKFTLNDK 384


>gi|59712334|ref|YP_205110.1| tyrosyl-tRNA synthetase [Vibrio fischeri ES114]
 gi|197335989|ref|YP_002156549.1| tyrosyl-tRNA synthetase [Vibrio fischeri MJ11]
 gi|75353688|sp|Q5E424|SYY_VIBF1 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|254765187|sp|B5FFR9|SYY_VIBFM RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|59480435|gb|AAW86222.1| tyrosyl-tRNA synthetase [Vibrio fischeri ES114]
 gi|197317479|gb|ACH66926.1| tyrosyl-tRNA synthetase [Vibrio fischeri MJ11]
          Length = 426

 Score =  475 bits (1224), Expect = e-132,   Method: Composition-based stats.
 Identities = 154/423 (36%), Positives = 229/423 (54%), Gaps = 19/423 (4%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M A  ++ L  L  RG I Q +   EL    S    T Y G+D TA SLH G L  L++L
Sbjct: 1   MTAT-NELLQDLKARGLIAQCTADEELAEHLSTDCRTLYCGFDPTADSLHIGSLVPLLVL 59

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GHKP++L+GG T +IGDPSF+   R++  ++ + + + KIK   S+F+ +   K
Sbjct: 60  KRFQQAGHKPLALVGGATGLIGDPSFKAAERQLNTNEVVGDWVNKIKAQVSAFVDFTEEK 119

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMIL 179
             A ++NN  W+  I  I+ +R++G  FSVN M+  ESV+ R+ RE   +SF EF+YM+L
Sbjct: 120 NGAEVVNNLDWIGQINVIEFMRDVGKHFSVNAMIQKESVKQRIDREGSGISFTEFSYMLL 179

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK 239
           Q+YDF  L K  +C LQ+GGSDQWGNI  GIDL  R+   K+F LT PL+T + GTK GK
Sbjct: 180 QSYDFAALNKAKECTLQIGGSDQWGNITGGIDLTRRMNRNKVFGLTLPLVTKSDGTKFGK 239

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINE 297
           T SG IWL+   TSPY F+Q+W    DADV +F +  T L + EI  + +         E
Sbjct: 240 TESGTIWLDSNKTSPYAFYQFWLGTADADVYNFLRFFTFLTVEEIAAVEESDKSVQGRPE 299

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS-----------QHMPTISISKDEV 346
            + I+A E+T +VHG E    A       F   + S             +P+  +   E 
Sbjct: 300 GQGILAREVTRLVHGEEGLASAERITKALFSGDLSSLTETDLAQLALDGLPSTELEASE- 358

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
                ++ ++ ++  A S   AR  + + A+ +N   +++ +  +K +D        +  
Sbjct: 359 ---QTIVEVLTQSELAKSNKMAREFIGNGAVSVNGEKVADTEAVLKKEDALFGKYSVIKR 415

Query: 407 GKK 409
           GKK
Sbjct: 416 GKK 418


>gi|320528949|ref|ZP_08030041.1| tyrosyl-tRNA synthetase [Selenomonas artemidis F0399]
 gi|320138579|gb|EFW30469.1| tyrosyl-tRNA synthetase [Selenomonas artemidis F0399]
          Length = 402

 Score =  475 bits (1224), Expect = e-132,   Method: Composition-based stats.
 Identities = 178/397 (44%), Positives = 250/397 (62%), Gaps = 10/397 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + + IL ERGF+ Q ++   L  L ++G VT YIG+D TA SLHAGH   LM +  LQK 
Sbjct: 3   NAIDILKERGFLAQCTDEEALRKLMAEGPVTFYIGFDPTADSLHAGHFIALMAMSHLQKA 62

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI L+GGGT  +GDPS R + R++M  + I+ N E  K   + FI +   +  A+M+
Sbjct: 63  GHRPICLVGGGTGTVGDPSGRTDMRKVMTDETIRHNCECFKKQIARFIDF--TEDRAIMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           +N  WL S+ YI+LLR++G+ F+VNRML+ ES + R   E+ L+FLEFNYMI+QAYDF+E
Sbjct: 121 DNGDWLRSLNYIELLRDVGAHFTVNRMLAAESYKQR--WEKGLTFLEFNYMIMQAYDFLE 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + Y CRLQMGG DQW NII G++L  R  +  +F LT+ LLT + GTKMGKT  GA+W
Sbjct: 179 LNRRYGCRLQMGGDDQWSNIIAGVELCRRKSSKTVFGLTNKLLTKSDGTKMGKTAGGALW 238

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           L+ E TSPY+F+QYWRNIDDADV +    LT LPM E+ R++  +G EIN +K+I+A E 
Sbjct: 239 LDAEKTSPYDFYQYWRNIDDADVETCLSLLTYLPMDEVRRLSAAEGAEINRSKEILAYEA 298

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
           T +VHG E A +A + A   F             + K   + G  L+ ++ + G   S  
Sbjct: 299 TKIVHGAEAAAQARSTAQALFSGGAAED------VPKVVCAAGEKLVDVLTRGGVFASKG 352

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
           EARR ++   + +N+  +S+E   +   DF +     
Sbjct: 353 EARRLIQQGGVTLNDLRVSDEHYVLGDADFSNGEAFL 389


>gi|332826992|gb|EGJ99786.1| tyrosyl-tRNA synthetase [Dysgonomonas gadei ATCC BAA-286]
          Length = 430

 Score =  475 bits (1224), Expect = e-132,   Method: Composition-based stats.
 Identities = 148/428 (34%), Positives = 233/428 (54%), Gaps = 22/428 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG I +I    E      + + + Y+G D TA SLH GHL  +M+L   Q+ 
Sbjct: 2   NFVEELRWRGMIQEIMPGTE--EQLQKELTSGYVGIDPTADSLHIGHLVSVMILKHFQRA 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM- 125
           GH+PI+L+GG T +IGDPS +   R ++    ++ N E IK   + F+ + + K +A + 
Sbjct: 60  GHRPIALVGGATGMIGDPSMKSAERNLLDEATLRHNQESIKKQLAKFLDFESDKPNAALL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQAYD 183
           +NN  W+    +++ +R+IG   +VN M++ +SV+ RL  E  + +SF EF+Y ++QAYD
Sbjct: 120 VNNYDWMKDFSFLNFIRDIGKHITVNYMMAKDSVKKRLSGEASEGMSFTEFSYQLMQAYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           ++ L +   CR+QMGGSDQWGNI  G +L  R  + + FAL  PL+T A GTK GKT SG
Sbjct: 180 YLHLYETLGCRIQMGGSDQWGNITTGTELIRRKASGEAFALVCPLITKADGTKFGKTESG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKI 301
            +WL +  TSPY F+Q+W N+ D D   + K  T L   EI+   M +     +   +K 
Sbjct: 240 NVWLERRYTSPYKFYQFWLNVSDDDAEKYIKIFTALSKEEIEALVMEQKSAPHLRPLQKR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDEVS 347
           +A E+T MVH  E+ ++A  A+   F  +                 + +PT  ISKDE+S
Sbjct: 300 LAKEVTVMVHSEEDYDQAVEASNILFGNATADALKKLDEETFLQVFEGVPTFDISKDELS 359

Query: 348 RGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+ ++ L+ + A    S  E R+ +++  + +N   + N    I      +   I    
Sbjct: 360 AGIKVVDLLTENASMFPSKGEMRKTVQAGGVMVNKVKVENFDDMIDSSFLIAGKYIIAQK 419

Query: 407 GKKNHIIC 414
           GKKN+ + 
Sbjct: 420 GKKNYFLL 427


>gi|160941404|ref|ZP_02088741.1| hypothetical protein CLOBOL_06297 [Clostridium bolteae ATCC
           BAA-613]
 gi|158435965|gb|EDP13732.1| hypothetical protein CLOBOL_06297 [Clostridium bolteae ATCC
           BAA-613]
          Length = 408

 Score =  475 bits (1224), Expect = e-132,   Method: Composition-based stats.
 Identities = 160/404 (39%), Positives = 237/404 (58%), Gaps = 6/404 (1%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
                L  RG I Q+++  E+  L + G    YIG+D TA SLH GH   L L+  LQ  
Sbjct: 2   GIYEELEARGLIAQVTDEAEIRELVNAGKAKFYIGFDPTADSLHVGHFMALCLMKRLQMA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           G++P+ L+GGGT  IGDPS R + R MM    I+ N E  K     FI +  G+  A+++
Sbjct: 62  GNRPVVLLGGGTGYIGDPSGRTDMRSMMGPDVIRRNCECFKRQMERFIDF-DGENGAIVV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL ++ YI+LLR++G+ FSVN ML  E  + R+  E+ LSFLEFNYMI+Q+YDF  
Sbjct: 121 NNADWLLNLNYIELLRDVGACFSVNNMLRAECYKQRM--EKGLSFLEFNYMIMQSYDFYH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L K   C +Q GG DQW N++ G +L  R      +A+T  LL  + G KMGKT  GA+W
Sbjct: 179 LYKELGCNMQFGGDDQWSNMLGGTELIRRKLGKDAYAMTITLLMNSEGNKMGKTARGAVW 238

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           L+ E TSP+ F+QYWRNI DADV+   + LT +P+ EID M   +G ++N AK+I+A ++
Sbjct: 239 LDPEKTSPFEFYQYWRNIADADVMKCIRMLTFIPVEEIDAMDGWEGAQLNRAKEILAYDL 298

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATST 365
           T +VHG EEA +A   ++  F  ++   +MP   + ++++ +G + ++ L+V    A S 
Sbjct: 299 TALVHGEEEARRAKETSVSLFTGAMDDDNMPFTEVGEEKLVQGSINIMDLLVLCRLAASK 358

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
           +EARR +    I+++   + +    +          I +  GKK
Sbjct: 359 SEARRLITQGGIQVSQKRVESIDFTVTRNMLMDG--IIIQKGKK 400


>gi|119716211|ref|YP_923176.1| tyrosyl-tRNA synthetase [Nocardioides sp. JS614]
 gi|119536872|gb|ABL81489.1| tyrosyl-tRNA synthetase [Nocardioides sp. JS614]
          Length = 423

 Score =  475 bits (1224), Expect = e-132,   Method: Composition-based stats.
 Identities = 144/421 (34%), Positives = 219/421 (52%), Gaps = 17/421 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L  RG I   ++   L    + G V  Y+G+D TA SLH G+L Q++    LQ+ G
Sbjct: 7   LLDDLEWRGLIAHSTDLDALREALAGGSVRFYVGFDPTAPSLHLGNLVQILTAKRLQEAG 66

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H P +L+GG T +IGDP    E R +     ++E +E+++     F+ +  G   A M+N
Sbjct: 67  HTPYALVGGATGMIGDPKESGE-RTLNSLDTVKEWVERVRRQIEPFLSF-EGANAATMVN 124

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W  S+  ID LR+IG  F VNRMLS + VRSRL     +S+ EF+Y++LQ+ DF+ L
Sbjct: 125 NYDWTASLSTIDFLRDIGKHFPVNRMLSRDVVRSRLDA--GISYTEFSYVLLQSMDFLNL 182

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            +++   LQ GGSDQWGN+  G++L  R    K  A  +PL+T A GTK GKT  GA+WL
Sbjct: 183 YRDHGVVLQFGGSDQWGNLTGGVELIRRAAGGKAHAFATPLITKADGTKYGKTEGGALWL 242

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIATE 305
           + EM SPY F+Q+W N++D  V    +  T LP +EI+ +     ++      ++ +A  
Sbjct: 243 DPEMMSPYAFYQFWLNVEDEKVGELLRVFTFLPRAEIEALEAEHAEKPFLRAGQRALAEH 302

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG----------MGLLTL 355
           +TT+VHG EE E+   A+   F     +  +   ++       G            ++ L
Sbjct: 303 VTTLVHGAEETERIRAASAALFGGGDLT-TLSAATLGAALREAGSASVDGDEDLPTVVDL 361

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +V  G A S  +ARR +      +NN+ + +       +D      + L  GKKN     
Sbjct: 362 LVATGLAKSKGDARRTVTEGGAYLNNARVEDPDHVPAPEDLIDGTWLVLRRGKKNFAGVE 421

Query: 416 L 416
           +
Sbjct: 422 V 422


>gi|326382716|ref|ZP_08204407.1| tyrosyl-tRNA synthetase [Gordonia neofelifaecis NRRL B-59395]
 gi|326198835|gb|EGD56018.1| tyrosyl-tRNA synthetase [Gordonia neofelifaecis NRRL B-59395]
          Length = 423

 Score =  475 bits (1223), Expect = e-132,   Method: Composition-based stats.
 Identities = 148/421 (35%), Positives = 231/421 (54%), Gaps = 14/421 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + L  L  RG I Q ++  +L     +  ++ Y G+D TASSLHAGHL  L+ L   Q  
Sbjct: 4   NILDDLIWRGLIGQTTDENDLREALDK-PISLYAGFDPTASSLHAGHLVPLLTLRRFQLA 62

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+P+ L GG T +IGDP    E R M  S  + +  E I G    F+        AL++
Sbjct: 63  GHRPVVLAGGATGLIGDPRDVGE-RTMNSSDTVADWAENIVGQLQRFVTIDDSDNGALLV 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   +  I+ LR++G  FSVN ML+ E+V+ RL+ +  +S+ EF+Y++LQ+ D+++
Sbjct: 122 NNFDWTGPMSTIEFLRDVGKHFSVNVMLARETVKRRLESD-GISYTEFSYLLLQSNDYLQ 180

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT-LSGAI 245
           L + Y C LQ+GGSDQWGNII G+DL  ++      ALT PL+T+A G K GK+   G++
Sbjct: 181 LYRKYGCVLQIGGSDQWGNIIGGVDLIRKVDGGSAHALTVPLVTSADGKKFGKSTGGGSV 240

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIA 303
           WL+ E+TSPY ++QY+ N  DADV+ F K  T L   EI+ + +L  ++    EA+K +A
Sbjct: 241 WLDPELTSPYAWYQYFVNTADADVIKFLKWFTFLRREEIEELEQLTAEKPFLREAQKRLA 300

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQ-HMPTIS-------ISKDEVSRGMGLLTL 355
            E+TT++HG ++   A  A+   F  +  +    PT++       +++ +      ++ L
Sbjct: 301 QELTTLIHGADQTAAAELASRALFGRAELNDLDEPTLAAALGETGLAEFDAGATPSIVEL 360

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +V +G A S   ARR +      +NN  +++        D      + L  GKK      
Sbjct: 361 LVASGLADSNKAARRAVDEGGAYVNNVKVTDADWMPASNDLLFGKWLVLRRGKKTFAGAK 420

Query: 416 L 416
           +
Sbjct: 421 I 421


>gi|296535640|ref|ZP_06897818.1| tyrosine--tRNA ligase [Roseomonas cervicalis ATCC 49957]
 gi|296264035|gb|EFH10482.1| tyrosine--tRNA ligase [Roseomonas cervicalis ATCC 49957]
          Length = 406

 Score =  475 bits (1223), Expect = e-132,   Method: Composition-based stats.
 Identities = 201/409 (49%), Positives = 277/409 (67%), Gaps = 7/409 (1%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +FL +  ERG+IHQ+++   +     QG + AY+G+D TA SLH GHL  +MLL  LQKT
Sbjct: 3   EFLQVARERGYIHQVTDEAAMAARMKQGPLPAYVGFDCTADSLHVGHLLSIMLLRLLQKT 62

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+P++L+GGGT+ IGDPSFRD++R ++  ++I  N   I+  F +F+ +  G+  A+ML
Sbjct: 63  GHRPVALLGGGTTRIGDPSFRDDARPLLSDEQINVNKAGIRRTFDAFLDFAPGRG-AMML 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           +N  WL  + YI  LR+IG  FSVNRML+ +SV+ RL+REQ LSFLEFNYM+LQ+YDF+E
Sbjct: 122 DNAEWLDQLLYIPFLRDIGRHFSVNRMLTMDSVKLRLEREQPLSFLEFNYMLLQSYDFLE 181

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + +   LQMGGSDQWGNII G++L  R    ++F LT+PLLTTASGTKMGKT  GA+W
Sbjct: 182 LRRRHGVGLQMGGSDQWGNIIMGVELNRRCDGAEVFGLTTPLLTTASGTKMGKTAGGAVW 241

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           LN +  +PY +WQ+WRN +DADV  F    T LPM E+ R+  L G E+NEAKKI+ATE 
Sbjct: 242 LNPDRLAPYGYWQFWRNTEDADVGRFLALFTELPMEEVRRLGALGGAEVNEAKKILATEA 301

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
           T ++HGRE AE AA  A   FD    +  +P+I+ S         ++ L V+AGFA S  
Sbjct: 302 TALLHGREAAELAAETARRAFDEGQAADTLPSIAASL-----PAPVIDLAVQAGFAASKG 356

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           EARR ++ N +++N+  I++E L +   D    G  KLS G+K H++  
Sbjct: 357 EARRLIRQNGLRLNDEAITDEALAVTEADL-RDGAAKLSAGRKRHVLIR 404


>gi|294789437|ref|ZP_06754674.1| tyrosine--tRNA ligase [Simonsiella muelleri ATCC 29453]
 gi|294482650|gb|EFG30340.1| tyrosine--tRNA ligase [Simonsiella muelleri ATCC 29453]
          Length = 432

 Score =  475 bits (1223), Expect = e-132,   Method: Composition-based stats.
 Identities = 153/428 (35%), Positives = 234/428 (54%), Gaps = 23/428 (5%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L+ L  RG I Q ++ +EL  L     +  Y G+D TA SLH GHL  +++L   Q  G
Sbjct: 4   LLADLQARGLISQTTDIQELSNLLDSEKIALYCGFDPTADSLHIGHLLPILVLRRFQDAG 63

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H P++L+GG T +IGDPSF+   R +   + +   +E I+     F+K+  G+  A+M N
Sbjct: 64  HTPVALVGGATGMIGDPSFKAVERSLNTPETVAGWVESIRNQLKPFLKF-DGENPAIMEN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDFVE 186
           N  W  ++  +D LR+IG  FSVN ML+ E+V+ R++RE Q +SF EF Y +LQ YDF E
Sbjct: 123 NANWFGTMNCLDFLRDIGKHFSVNAMLAKEAVKQRIEREDQGISFTEFAYALLQGYDFAE 182

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L K ++ +L++GGSDQWGNI  G +   RL    +  +T PL+T A GTK GKT  GA+W
Sbjct: 183 LNKRHNVKLEIGGSDQWGNITWGTETTRRLNQQSVHGMTLPLVTKADGTKFGKTEGGAVW 242

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLP---MSEIDRMAKLQGKEINEAKKIIA 303
           L+   TSPY F+Q+W  + DADV  F K  T L    + EI+   K  GK+  +A++I+A
Sbjct: 243 LDAAKTSPYQFYQFWLKVADADVYKFLKYFTFLSIKKIDEIETADKASGKKP-KAQRILA 301

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTLIV 357
            E+T ++HG    + A       F     +        +    +    VS  + ++  +V
Sbjct: 302 EEMTRLIHGDVALQAAQRITDSLFSGDESNLTEQDYAQLALDGLPTIMVSGSLNVVEALV 361

Query: 358 KAGFATSTNEARRHLKSNAIKINNSI-IS----------NEKLQIKLQDFDSTGNIKLSF 406
           +AG A S  EAR  +++ A+ IN ++ +           ++K QI  ++        +  
Sbjct: 362 QAGLAQSNKEARGFVQNGAVLINGAVAVENNPHFTPEKPDDKYQITHENKRFGKYTIVRR 421

Query: 407 GKKNHIIC 414
           GK+NH + 
Sbjct: 422 GKRNHALL 429


>gi|289704496|ref|ZP_06500931.1| tyrosine--tRNA ligase [Micrococcus luteus SK58]
 gi|289558754|gb|EFD52010.1| tyrosine--tRNA ligase [Micrococcus luteus SK58]
          Length = 447

 Score =  475 bits (1223), Expect = e-132,   Method: Composition-based stats.
 Identities = 141/423 (33%), Positives = 220/423 (52%), Gaps = 17/423 (4%)

Query: 2   PAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
           P+F+ +    L  RG +H  ++   L+   +   V+ Y G+D TA SLH GHL QL+ L 
Sbjct: 19  PSFE-NVWQELRWRGLVHVSTDEAALEQALAGEPVSYYCGFDPTAPSLHLGHLVQLLTLR 77

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKT 121
            LQ  GH+P +L+GG T +IGDP  +   R +   + +   +E ++     ++ +  G+ 
Sbjct: 78  RLQLAGHRPYALVGGATGLIGDPR-QTSERVLNSQETVAAWVESLRAQIEPYLSF-EGEN 135

Query: 122 DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA 181
            A M+NN  W   +  +D LR++G  F V  M+  E V  RL  ++ +S+ EF+Y +LQ 
Sbjct: 136 AATMVNNLDWTAGMSALDFLRDVGKNFRVGTMVKKEIVAKRLNSDEGISYTEFSYQVLQG 195

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            DF+EL + +   LQ GGSDQWGN+  G +L  +++     AL +PL+T A GTK GK+ 
Sbjct: 196 NDFLELHRRHGVTLQTGGSDQWGNLTAGTELIRKVEGTHAHALGTPLITNADGTKFGKSE 255

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAK 299
             A+WL+ EM SPY F+Q+W N  DADVV   K  T L  +EI+  A+    E    EA+
Sbjct: 256 GNAVWLDAEMCSPYAFYQFWLNTADADVVDRLKVFTFLTRAEIEEYAQKVADEPFRREAQ 315

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHS-----------QHMPTISISKDEVSR 348
           K +A E+T + HG E   K   A+   F     +             +P    ++ E   
Sbjct: 316 KRLAWEVTALAHGEETTTKVIEASQAVFGGGDLTTVDPDTLTAVLAELPQADRTQWEGEP 375

Query: 349 G-MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFG 407
           G +  + L+V  G   S +EARR ++     +NN  +++        D  +  ++ +  G
Sbjct: 376 GTVTAVELLVSTGLVASRSEARRTVRDGGASVNNVRVTDADQVFTRDDAFAGRHLLVRRG 435

Query: 408 KKN 410
           KKN
Sbjct: 436 KKN 438


>gi|167747098|ref|ZP_02419225.1| hypothetical protein ANACAC_01810 [Anaerostipes caccae DSM 14662]
 gi|317471911|ref|ZP_07931246.1| tyrosyl-tRNA synthetase [Anaerostipes sp. 3_2_56FAA]
 gi|167654058|gb|EDR98187.1| hypothetical protein ANACAC_01810 [Anaerostipes caccae DSM 14662]
 gi|316900684|gb|EFV22663.1| tyrosyl-tRNA synthetase [Anaerostipes sp. 3_2_56FAA]
          Length = 410

 Score =  475 bits (1222), Expect = e-132,   Method: Composition-based stats.
 Identities = 173/392 (44%), Positives = 243/392 (61%), Gaps = 5/392 (1%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +   IL ERGFI Q ++   L  L  +  VT YIG+D TA SL AGH   +M +  +Q+ 
Sbjct: 4   NVYDILQERGFIAQTTHEE-LRDLLGKEKVTFYIGFDATADSLTAGHFLTVMAMMHMQRA 62

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI+L+GGGT++IGDPS + + R +M  + I+ N  + K   S FI +   K  A++ 
Sbjct: 63  GHRPIALLGGGTTMIGDPSGKSDMRNIMTKETIEHNAMRFKEQLSRFISFDNDK--AILE 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  + Y+D LREIG  FSVN+ML+ E  + R+  E+ L+F EFNYM++QAYDF+E
Sbjct: 121 NNADWLLDLNYVDFLREIGVHFSVNKMLTAECYKQRM--EKGLTFFEFNYMLMQAYDFLE 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + Y C L+MGG+DQW NI+ G DL  R +    F LT  LLT + G KMGKT+SGA+W
Sbjct: 179 LNRRYGCTLEMGGNDQWSNILAGADLIRRKEQKNAFGLTLTLLTRSDGVKMGKTMSGAVW 238

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           L+ E TSPY F+QYWRNI+D  V      LT LPM E+ R+  LQ  EIN+AK+++A E+
Sbjct: 239 LDPEKTSPYEFYQYWRNIEDVKVEECLGLLTFLPMEEVRRLGALQDAEINKAKEVLAYEV 298

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
           T +VHG EEA+KA   A   F     S+  P    SK ++  G+ +LTL+V     ++ +
Sbjct: 299 TKIVHGEEEAKKAQAGAKALFVQGAASEDAPVHEYSKAQLEEGLDILTLLVDTKLCSTRS 358

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
           +ARR +    + +N   +++ K      DFD 
Sbjct: 359 DARRTVTQGGVSVNGEKVTDFKQVFTSADFDD 390


>gi|293189895|ref|ZP_06608601.1| tyrosine--tRNA ligase [Actinomyces odontolyticus F0309]
 gi|292821198|gb|EFF80144.1| tyrosine--tRNA ligase [Actinomyces odontolyticus F0309]
          Length = 420

 Score =  475 bits (1222), Expect = e-132,   Method: Composition-based stats.
 Identities = 141/425 (33%), Positives = 224/425 (52%), Gaps = 19/425 (4%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +D L  L  RG + Q ++   L    + G VT Y GYD TA SLH GHL QL+++  LQ 
Sbjct: 2   TDILDELQWRGLLAQHTDLEALREHLNAGPVTFYCGYDPTAPSLHHGHLVQLIVMRHLQL 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+P++L+GG T  IGDP    E R++  ++ ++   +++    S F+ +  G   A M
Sbjct: 62  AGHRPLALVGGATGQIGDPRQSGE-RQLQSTEVVKGWADRLHSQISKFLDF-EGPAAATM 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  W   +  ID+LR IG +F V  ML+ + V  R+  ++ +S+ EF+Y +LQA DF+
Sbjct: 120 VNNLDWTQEMSAIDMLRTIGKYFRVGTMLNKDIVARRIASDEGISYTEFSYQVLQANDFL 179

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           EL +   C L+ GG+DQWGN++ G+DL  +++      +T+P++T A GTK GK+  GAI
Sbjct: 180 ELYRRNGCTLETGGNDQWGNMVGGVDLIRKVEGVDTHVMTTPIITKADGTKFGKSEGGAI 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIA 303
           WL+ EM +PY F+Q+W  + D DVV F K  T     EI+ +A    +      A+K +A
Sbjct: 240 WLDPEMMTPYAFYQFWLQVADDDVVRFLKIFTFKSREEIEALAVEVAERPHQRAAQKALA 299

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQ-----------HMPTISISKDEVSRGMGL 352
             +T +VHG ++ E+   A    +                   +P  S++  E      +
Sbjct: 300 ASVTELVHGADQLERVLAATDALWGGGDIRDLDEATLVAATADLPRASLTIGES----TV 355

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
              +V  GF      ARR + S    INN  + + +  ++ +D  + G   +  G+KN  
Sbjct: 356 ADALVALGFEKGKTAARRTISSGGASINNVKVEDPEAVLRDEDVVAGGLALIRKGRKNLA 415

Query: 413 ICHLC 417
           +  L 
Sbjct: 416 VLELS 420


>gi|256847595|ref|ZP_05553040.1| tyrosyl-tRNA synthetase [Lactobacillus coleohominis 101-4-CHN]
 gi|256715284|gb|EEU30260.1| tyrosyl-tRNA synthetase [Lactobacillus coleohominis 101-4-CHN]
          Length = 416

 Score =  475 bits (1222), Expect = e-132,   Method: Composition-based stats.
 Identities = 153/424 (36%), Positives = 220/424 (51%), Gaps = 23/424 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D L  L  RG I+Q ++   L  L     ++ Y G D T  SLH GHL   ++L   Q  
Sbjct: 2   DILEDLKWRGAINQCTDLDGLRELLKTKKISLYCGTDPTGDSLHIGHLIPFIMLKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P  L+GGGT  IGDPS R   R++  S ++Q N E +            G  +  ++
Sbjct: 62  GHHPYILIGGGTGFIGDPSGRKTERQLQTSDQVQHNKEALTKQMIKLF----GTENFKIV 117

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           +N  WL  I  +D LR+ G  F+VN MLS E+V SRLK    +SF EF+Y ILQ+ DF+ 
Sbjct: 118 DNYDWLSKISLLDFLRDYGKSFNVNTMLSKEAVASRLKN--GISFTEFSYQILQSVDFLY 175

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASGTKMGKTLSGAI 245
           L    D +LQ+GG+DQWGN+  G+DL    K   K F LT PL+  A GTK GKT  GA+
Sbjct: 176 LNNTEDIQLQIGGADQWGNLTNGVDLIHSKKPNEKAFGLTIPLMLKADGTKFGKTAGGAV 235

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIA 303
           WL+ + TSP+ F+Q+W N DD DVV + K  T L   EID +A+    E    EA++ +A
Sbjct: 236 WLDAKKTSPFEFYQFWLNQDDRDVVKYLKYFTFLSHEEIDDLAEKVKTEPQKREAQRRLA 295

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLL 353
            E+T  VHG E  ++A   +   F   I            + +P++ IS    S+ + ++
Sbjct: 296 EEVTKFVHGEEAMKQAEKMSNILFKGDIQDLSVEELKQAFEKVPSVEIS----SKPVNVI 351

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
             +V+     S  +AR  + + AI IN   IS+E   +          +    GK+N+ +
Sbjct: 352 DWLVQIEIEPSKRQAREDVNNGAITINGQKISDESFVVDPSTNFDGQYVVARKGKRNYFL 411

Query: 414 CHLC 417
             + 
Sbjct: 412 AKVT 415


>gi|239917922|ref|YP_002957480.1| tyrosyl-tRNA synthetase [Micrococcus luteus NCTC 2665]
 gi|239839129|gb|ACS30926.1| tyrosyl-tRNA synthetase [Micrococcus luteus NCTC 2665]
          Length = 447

 Score =  475 bits (1222), Expect = e-132,   Method: Composition-based stats.
 Identities = 142/423 (33%), Positives = 220/423 (52%), Gaps = 17/423 (4%)

Query: 2   PAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
           P+F+ +    L  RG +H  ++   L+   +   V+ Y G+D TA SLH GHL QL+ L 
Sbjct: 19  PSFE-NVWQELRWRGLVHVSTDEAALEQALAGEPVSYYCGFDPTAPSLHLGHLVQLLTLR 77

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKT 121
            LQ  GH+P +L+GG T +IGDP  +   R +   + +   +E ++     ++ +  G+ 
Sbjct: 78  RLQLAGHRPYALVGGATGLIGDPR-QTSERVLNSQETVAAWVESLRAQIEPYLSF-EGEN 135

Query: 122 DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA 181
            A M+NN  W   +  +D LR+IG  F V  M+  E V  RL  ++ +S+ EF+Y +LQ 
Sbjct: 136 AATMVNNLDWTAGMSALDFLRDIGKNFRVGTMVKKEIVAKRLNSDEGISYTEFSYQVLQG 195

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            DF+EL + +   LQ GGSDQWGN+  G +L  +++     AL +PL+T A GTK GK+ 
Sbjct: 196 NDFLELHRRHGVTLQTGGSDQWGNLTAGTELIRKVEGTHAHALGTPLITNADGTKFGKSE 255

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAK 299
             A+WL+ EM SPY F+Q+W N  DADVV   K  T L  +EI+  A+    E    EA+
Sbjct: 256 GNAVWLDAEMCSPYAFYQFWLNTADADVVDRLKVFTFLTRAEIEEYAQKVADEPFRREAQ 315

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHS-----------QHMPTISISKDEVSR 348
           K +A E+T + HG E   K   A+   F     +             +P    ++ E   
Sbjct: 316 KRLAWEVTALAHGEETTTKVIEASQAVFGGGDLTTVDPDTLTAVLAELPQADRTQWEGEP 375

Query: 349 G-MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFG 407
           G +  + L+V  G   S +EARR ++     +NN  +++        D  +  ++ +  G
Sbjct: 376 GTVTAVELLVSTGLVASRSEARRTVRDGGASVNNVRVTDADQVFTRDDAFAGRHLLVRRG 435

Query: 408 KKN 410
           KKN
Sbjct: 436 KKN 438


>gi|298373648|ref|ZP_06983637.1| tyrosine--tRNA ligase [Bacteroidetes oral taxon 274 str. F0058]
 gi|298274700|gb|EFI16252.1| tyrosine--tRNA ligase [Bacteroidetes oral taxon 274 str. F0058]
          Length = 430

 Score =  474 bits (1221), Expect = e-132,   Method: Composition-based stats.
 Identities = 150/428 (35%), Positives = 227/428 (53%), Gaps = 22/428 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG +H I    E   +  +  +TAY+G D TA SLH GHL  +M+L   Q+ 
Sbjct: 2   NFVEELRWRGMLHDIMPGTE--DILKKECITAYVGIDPTADSLHIGHLCSVMMLKHFQRC 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG-KTDALM 125
           GHKPI L+GG T +IGDPS + + R ++    ++ N E I+     F+ +G      A +
Sbjct: 60  GHKPIVLVGGATGMIGDPSGKSDERNLLDEDTLRHNQEAIRLQLQKFLDFGDDAPNAAEL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQAYD 183
           +NN  W+  + ++D  R IG   +VN M+S +SV+ RL  E    +SF EF Y +LQ +D
Sbjct: 120 VNNYDWMKDVTFLDFTRNIGKHITVNYMMSKDSVKRRLNGEFSAGMSFTEFTYQLLQGFD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ L +  +C+LQMGGSDQWGNI  G +L  R++  + FALT PL+T A GTK GKT +G
Sbjct: 180 FLHLYRTKNCKLQMGGSDQWGNITTGTELIRRIEQSEAFALTCPLITKADGTKFGKTETG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKI 301
            IWL+ E TSPY F+Q+W N  D D   + +  T LP  EI  +        +E   ++ 
Sbjct: 240 NIWLSAEYTSPYKFYQFWLNTADEDAERYIRIFTELPHDEIAALVAEHKNAPHERKLQRR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDEVS 347
           +A E+T MVH  E  + A  A+   F  +                 + +P  +I K  + 
Sbjct: 300 LAEEVTVMVHSHEALQMAVEASAILFGNATKEMLSRIDEQTLLSLFEGVPRFTIDKGLLQ 359

Query: 348 RGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+  LTL+ +      S  EAR+ +++N + +N   +++    I L        + +  
Sbjct: 360 SGVQPLTLLAELTNIFPSKGEARKTIQANGLSLNKEKLTDIDRLIGLDSLIGDKYLIVQK 419

Query: 407 GKKNHIIC 414
           GKKN+   
Sbjct: 420 GKKNYYCI 427


>gi|262277363|ref|ZP_06055156.1| tyrosyl-tRNA synthetase [alpha proteobacterium HIMB114]
 gi|262224466|gb|EEY74925.1| tyrosyl-tRNA synthetase [alpha proteobacterium HIMB114]
          Length = 412

 Score =  474 bits (1221), Expect = e-132,   Method: Composition-based stats.
 Identities = 192/409 (46%), Positives = 283/409 (69%), Gaps = 2/409 (0%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + L+I   RG+  Q +N   L  L  +  +  YIG+D TA SLH G L Q+M L  LQK 
Sbjct: 4   NALNIFKNRGYFFQCTNEGALSKLLGKKKIHFYIGFDCTAKSLHVGSLLQIMCLRQLQKL 63

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P+ L+GGGT++IGDPS ++ESR+++    I++N+  IK +FSSF+    G    + +
Sbjct: 64  GHTPVVLLGGGTTLIGDPSGKEESRKILTEDVIEQNVTSIKKVFSSFLS-NEGDNKVVYV 122

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN+ WL  + YI+ LR+ G  F++N+ML+F+SV+ RL REQSLSFLEFNYMI QAYDF++
Sbjct: 123 NNKDWLKGLNYIEFLRDYGKHFTINKMLTFDSVKLRLDREQSLSFLEFNYMIFQAYDFMK 182

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + +DC LQ+GGSDQWGNI+ G++L  R K+ + + LT+PL+TT+SG KMGKT  GA+W
Sbjct: 183 LYETHDCLLQIGGSDQWGNIVNGVELIRRSKSKEAYGLTTPLITTSSGAKMGKTEKGAVW 242

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           L+KE+ S +++WQ+WRN DD DV+++ K  T L   EI++++KL G  INEAK I+A E 
Sbjct: 243 LDKELLSSFDYWQFWRNTDDRDVINYLKLFTELSEEEIEKLSKLDGANINEAKIILANEA 302

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
           T M+HG+EEAEKA   + + FD     +++PT+ I K+E+ +G+ L  +++K GFATS +
Sbjct: 303 TKMLHGKEEAEKALETSKKTFDDKSFDENLPTLEIKKNELEKGISLKEMLIKIGFATSNS 362

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           + +R+ ++ A KINN  +++E   + + + D    IKLSFGKK H +  
Sbjct: 363 DFKRNFQNAAYKINNENVTDENQALTIDNLDGD-TIKLSFGKKKHHLIK 410


>gi|160946158|ref|ZP_02093369.1| hypothetical protein PEPMIC_00120 [Parvimonas micra ATCC 33270]
 gi|158447681|gb|EDP24676.1| hypothetical protein PEPMIC_00120 [Parvimonas micra ATCC 33270]
          Length = 408

 Score =  474 bits (1221), Expect = e-131,   Method: Composition-based stats.
 Identities = 161/410 (39%), Positives = 251/410 (61%), Gaps = 9/410 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
            +    L +RG+  Q +   EL  L S+  V  YIG+D TA SL  GH  Q+M++  +Q 
Sbjct: 4   KNIFEELVDRGYFEQATYEDELKELLSKERVKFYIGFDATADSLTIGHFIQIMVMKRMQN 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH PI+L+GGGT++IGDPS R + R +M  ++I  N ++     S FI +  G  +A++
Sbjct: 64  YGHIPIALLGGGTTMIGDPSGRSDMRMVMTEEQINYNAKRFFEQLSRFIDFTDG--NAII 121

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
            NN+ WL  + +I  ++E+G  FSVN+ML+ ++ ++R+  E+ L+F EF+YM++Q+YDF+
Sbjct: 122 ENNKDWLLDLNFIKFMKEVGVHFSVNKMLTCDAYKNRM--EKGLTFFEFSYMLMQSYDFL 179

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L + + C+LQ+GGSDQW NI+ G DL  +L+  K++A+T  LLTTA G KMGK+  GA+
Sbjct: 180 YLYRKHGCKLQLGGSDQWSNILGGYDLVRKLEQDKVYAMTFKLLTTADGVKMGKSQKGAV 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
           WL++E TSPY  +QY RN+DD DV  F   LT LP  +   + K + + INEAK+I+A E
Sbjct: 240 WLDEEKTSPYELFQYMRNVDDRDVEKFLLMLTFLPTEKCRELGKYKDERINEAKEILAFE 299

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVS-RGMGLLTLIVKAGFATS 364
           +T ++HG E+A+KA   A   F   +  ++MP+  I K +     +G+L LI   G + S
Sbjct: 300 VTKIIHGEEKAQKALETARALFSGELLDENMPSTEIKKSDFENEEIGILDLIRTCGLSKS 359

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
             EARR ++   I +N   +++  L++      +   I +  GKK +   
Sbjct: 360 NGEARRLIEQGGISLNGEKVADTNLKVS----LNLEEIVIKKGKKIYHRV 405


>gi|238021893|ref|ZP_04602319.1| hypothetical protein GCWU000324_01797 [Kingella oralis ATCC 51147]
 gi|237866507|gb|EEP67549.1| hypothetical protein GCWU000324_01797 [Kingella oralis ATCC 51147]
          Length = 434

 Score =  474 bits (1221), Expect = e-131,   Method: Composition-based stats.
 Identities = 155/432 (35%), Positives = 227/432 (52%), Gaps = 29/432 (6%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L  RG I Q ++  EL  L     +  Y G+D TA SLH GHL  +++L   Q  G
Sbjct: 4   LLQDLQARGLIAQTTDINELSKLLDNEKIALYCGFDPTADSLHIGHLLPVLVLRRFQNAG 63

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H P++L+GG T +IGDPSF+   R +   + +   +E IK   + F+K+ + +  A+M N
Sbjct: 64  HTPVALVGGATGMIGDPSFKAVERSLNTPETVAGWVESIKNQLTPFLKFDS-ENPAIMEN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDFVE 186
           N  W  S+  +D LR+IG  FSVN ML+ ESV+ R++RE Q +SF EF+Y +LQ YDF +
Sbjct: 123 NANWFGSMNCLDFLRDIGKHFSVNAMLAKESVKQRIEREDQGISFTEFSYALLQGYDFAQ 182

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L   ++ +L++GGSDQWGNI  G +   RL    +  +T PL+T A GTK GKT  GA+W
Sbjct: 183 LNLRHNVQLEIGGSDQWGNITWGTETTRRLNHKTVHGMTLPLVTKADGTKFGKTEGGAVW 242

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINEAKKIIAT 304
           LN   TSPY F+Q+W  + DADV  F K  T L + +ID +           EA++I+A 
Sbjct: 243 LNAAKTSPYQFYQFWLKVADADVYKFLKYFTFLTLEQIDAIEAADKASSAKPEAQRILAE 302

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHS-----------QHMPTISISKDEVSRGMGLL 353
           E+T ++HG    E A       F     S             +P + +S    S  + ++
Sbjct: 303 EMTRLIHGEAALEAAQRITQSLFSGDESSLTEQDYAQLALDGLPALHVSH---SGSLNVV 359

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIIS-----------NEKLQIKLQDFDSTGNI 402
             +V+AG A S  EAR  ++SNA+ IN S              ++   +           
Sbjct: 360 EALVQAGLAKSNKEARGFVQSNAVLINGSPAEANNPNHAAEKPDDLYLLTDAHKRFGKYT 419

Query: 403 KLSFGKKNHIIC 414
            +  GK+NH + 
Sbjct: 420 IIKRGKRNHALL 431


>gi|108799921|ref|YP_640118.1| tyrosyl-tRNA synthetase [Mycobacterium sp. MCS]
 gi|119869031|ref|YP_938983.1| tyrosyl-tRNA synthetase [Mycobacterium sp. KMS]
 gi|123070071|sp|Q1B7S2|SYY_MYCSS RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|189083661|sp|A1UH85|SYY_MYCSK RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|108770340|gb|ABG09062.1| tyrosyl-tRNA synthetase [Mycobacterium sp. MCS]
 gi|119695120|gb|ABL92193.1| tyrosyl-tRNA synthetase [Mycobacterium sp. KMS]
          Length = 423

 Score =  474 bits (1221), Expect = e-131,   Method: Composition-based stats.
 Identities = 144/424 (33%), Positives = 229/424 (54%), Gaps = 13/424 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S  L  L  RG I Q ++   L    + G +T Y G+D TA SLHAGHL  L+ L   Q+
Sbjct: 2   SSILDELDWRGLIAQSTDRDALAAELAAGPMTLYSGFDPTAPSLHAGHLVPLLTLRRFQQ 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+PI L GG T +IGDP    E R +  +  + +  ++I+G    F+++    T A++
Sbjct: 62  AGHRPIVLAGGATGMIGDPRDTGE-RTLQTADTVADWADRIRGQLERFVEFDESPTGAIV 120

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
            NN +W  ++  I+ LR++G +FSVN ML  ++VR RL+  + +S+ EF+YM+LQA D+V
Sbjct: 121 ENNLSWTGALSTIEFLRDVGKYFSVNVMLDRDTVRRRLE-GEGISYTEFSYMLLQANDYV 179

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT-LSGA 244
           +L K + C LQ+GGSDQWGNI+ G+ L  +     + A+T+PL+T + G K GK+   G 
Sbjct: 180 QLRKRHGCALQIGGSDQWGNIVAGVRLVRQKLGDTVHAMTTPLVTDSEGKKFGKSTGGGN 239

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKII 302
           +WL+ EMT+PY ++QY+ N  DADVV++ +  T L   E+  + +          A++ +
Sbjct: 240 LWLDPEMTTPYAWYQYFINTADADVVNYLRWFTFLEAGELAELEEATRDRPHQRTAQRRL 299

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSI--------HSQHMPTISISKDEVSRGMGLLT 354
           A E+TT+VHG +       A+   F             +  +   S+++   S    +  
Sbjct: 300 ARELTTLVHGEDATRSVEHASQALFGRGELAALDEPTLAAALREASVAELTPSGPDLITD 359

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           L+V  G + S   ARR +    + +NN  I +++   +  DF     + L  GK+N    
Sbjct: 360 LLVATGLSASKGAARRTIAEGGVSVNNMKIDSDEWTPQASDFLHGRWLVLRRGKRNIAGV 419

Query: 415 HLCG 418
              G
Sbjct: 420 QRVG 423


>gi|302848016|ref|XP_002955541.1| hypothetical protein VOLCADRAFT_83275 [Volvox carteri f.
           nagariensis]
 gi|300259164|gb|EFJ43394.1| hypothetical protein VOLCADRAFT_83275 [Volvox carteri f.
           nagariensis]
          Length = 520

 Score =  474 bits (1221), Expect = e-131,   Method: Composition-based stats.
 Identities = 144/436 (33%), Positives = 237/436 (54%), Gaps = 24/436 (5%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILC--SQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
           + + +++L  RG + +++   EL+     ++G ++ Y G+D TA SLH G+L  +++L W
Sbjct: 84  RPNVVALLRSRGLVQEVTGGEELEAAAGGAEGPLSVYCGFDPTADSLHLGNLLGIVVLSW 143

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK-- 120
            Q+ GH+P++L+GG T  +GDPS R   R ++  ++I+ N+  I+ +    +   +    
Sbjct: 144 FQRCGHQPVALLGGATGRVGDPSGRSTERPVLSEEQIEHNVAAIRSLLQDILTRNSPPGA 203

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +LNN  W   + ++  LREIG F  V  M++ +SVR+R++ EQ +SF EF Y +LQ
Sbjct: 204 PAVRVLNNLDWFGPMSFLTFLREIGKFARVGAMMAKDSVRTRMESEQGISFTEFTYQLLQ 263

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK------LFALTSPLLTTASG 234
            YDFV L + ++ R+Q+GGSDQWGNI  G DL  +L   +       + LT PLL  + G
Sbjct: 264 GYDFVHLCREHNVRVQIGGSDQWGNITAGTDLVRKLLGGEDREAPACYGLTFPLLVDSEG 323

Query: 235 TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE 294
            K GK++ GAIWL+ E  SPY F+QY   + DADV+   K LT LP+ EID +    G  
Sbjct: 324 RKFGKSVGGAIWLSAEKLSPYKFYQYLFQVTDADVIKLLKMLTFLPLEEIDGLQAAMGAP 383

Query: 295 ---INEAKKIIATEITTMVHGREEAEKAATAAMEC----------FDMSIHSQHMPTISI 341
               N A++ +A E+T  VHG E   +A  A                +   +   P+ ++
Sbjct: 384 GYVPNTAQRRLAEEVTRFVHGEEGLAQAIKATEALKPGAATQLDAATLETVAGDAPSATL 443

Query: 342 SKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
           ++  V  G+ L  ++V      S + AR+ +K   + +NN+ +S E   +K  D      
Sbjct: 444 TRGSV-EGVPLADILVAVKLQPSKSAARKLIKGGGVYLNNAKVSEELYTVKPSDLIDGRL 502

Query: 402 IKLSFGKKNHIICHLC 417
           + ++ GKKN ++  + 
Sbjct: 503 LLIAAGKKNKMLVRVA 518


>gi|319440355|ref|ZP_07989511.1| hypothetical protein CvarD4_01176 [Corynebacterium variabile DSM
           44702]
          Length = 419

 Score =  474 bits (1220), Expect = e-131,   Method: Composition-based stats.
 Identities = 159/422 (37%), Positives = 237/422 (56%), Gaps = 17/422 (4%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ L  LS RG + Q ++   L         TAY+G+D T  SLHAGHL  L++L  LQ+
Sbjct: 2   SNILDELSWRGLVAQSTDIDALRTELDT-PTTAYVGFDPTGPSLHAGHLVPLLMLARLQR 60

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH PI L GG T +IGDP    E R M+  +   EN+E+I+   +SF+ +  G+  A+M
Sbjct: 61  AGHTPILLAGGATGMIGDPRDVGE-RSMISEETAAENVERIRKQLASFVSF-EGENAAIM 118

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
            NN  W  S+  +D LR++G  FS+N MLS ++V+ RL+ +  +S+ EF+YM+LQA DFV
Sbjct: 119 ANNMDWTGSMSVVDFLRDVGKNFSLNTMLSRDTVKRRLESD-GISYTEFSYMLLQANDFV 177

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA- 244
           +L +N+DCRLQ+GGSDQWGNI+ G+DL  R+    +  LT PL+T + G K GK+  G  
Sbjct: 178 QLRRNHDCRLQIGGSDQWGNIVSGVDLNRRVDGEVVHGLTVPLVTDSEGRKFGKSTGGGK 237

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKII 302
           +WL+ EMTSPY+++QY+ N  DADV+ + +  T L   E+DR+A    +     EA++ +
Sbjct: 238 LWLDPEMTSPYSWYQYFLNAADADVIRYLRWFTFLGQEELDRLAVEVEERPFKREAQRTL 297

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQ--------HMPTISISKDEVSRGMGLLT 354
           A E+TT+VHG +   K   AA   F  +  ++         +    ++   V+    +L 
Sbjct: 298 AREMTTLVHGEDAVAKVEKAAEALFGKAELAELDEQTLASALSETEVAA--VAADATILD 355

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           L+V AG   +   ARR +      +NN  IS        +D      + L  GKK     
Sbjct: 356 LLVGAGLEKTKGAARRTVGEGGAYVNNERISEIDWTPSAEDLLHGSWLVLRKGKKRFAGA 415

Query: 415 HL 416
            +
Sbjct: 416 RV 417


>gi|332885512|gb|EGK05761.1| tyrosyl-tRNA synthetase [Dysgonomonas mossii DSM 22836]
          Length = 430

 Score =  474 bits (1220), Expect = e-131,   Method: Composition-based stats.
 Identities = 149/428 (34%), Positives = 231/428 (53%), Gaps = 22/428 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG IH+I    E      + + + Y+G D TA SLH GHL  +M+L   Q+ 
Sbjct: 2   NFVEELRWRGMIHEIMPGTE--EQLQKELTSGYVGIDPTADSLHIGHLVGVMILKHFQRA 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM- 125
           GH+PI+L+GG T +IGDPS +   R ++    ++ N E +K   + F+ + + K +A + 
Sbjct: 60  GHRPIALIGGATGMIGDPSMKSAERNLLDEATLRHNQESLKKQLAKFLDFESDKPNAALL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQAYD 183
           +NN  W+    +++ +R+IG   +VN M+S +SV+ RL  E  + +SF EF+Y ++Q YD
Sbjct: 120 VNNYDWMKDFSFLNFIRDIGKHITVNYMMSKDSVKKRLNGESSEGMSFTEFSYQLMQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ L +   CR+QMGGSDQWGNI  G +L  R    + FAL  PL+T A GTK GKT SG
Sbjct: 180 FLHLYQTLGCRIQMGGSDQWGNITTGTELIRRKAGGEAFALVCPLITKADGTKFGKTESG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKI 301
            +WL++  TSPY F+Q+W N+ D D   + K  T L   EI+   + +     +   +K 
Sbjct: 240 NVWLDRRYTSPYKFYQFWLNVSDEDAEKYIKIFTALDKEEIEGLVVEQKAAPHLRALQKR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDEVS 347
           +A EIT MVH  E+  +A  A+   F  +                 + +PT  ISKDE++
Sbjct: 300 LAKEITIMVHSEEDYNQAVEASNILFGNATADALKKLDEETFLQVFEGVPTFDISKDELA 359

Query: 348 RGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+  + L+ + A    S  E R+ +++  + IN   + N    I      +   I    
Sbjct: 360 AGIKAVDLLTEKAAVFPSKGEMRKTVQAGGVMINKEKLENFDDAIDASSLIAEKYIIAQK 419

Query: 407 GKKNHIIC 414
           GKKN+ + 
Sbjct: 420 GKKNYFLL 427


>gi|294674941|ref|YP_003575557.1| tyrosine--tRNA ligase [Prevotella ruminicola 23]
 gi|294473475|gb|ADE82864.1| tyrosine--tRNA ligase [Prevotella ruminicola 23]
          Length = 431

 Score =  473 bits (1219), Expect = e-131,   Method: Composition-based stats.
 Identities = 146/431 (33%), Positives = 229/431 (53%), Gaps = 26/431 (6%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
            +F+  L  RG + Q+    E   L  + +VTAY+G D TA SLH GHL  +M+L  LQ 
Sbjct: 2   KNFVEELKWRGMLAQMMPGTE--ELLQKEMVTAYLGTDPTADSLHIGHLCGIMMLRHLQH 59

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL- 124
            GH+P+ L+GG T +IGDPS + + R ++ ++ +  N E IK   + F+ + + + +A  
Sbjct: 60  CGHRPVILVGGATGMIGDPSGKSQERNLLNNETLYHNQECIKKQVAKFLDFESKEPNAAL 119

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK--REQSLSFLEFNYMILQAY 182
           M+NN  W+    ++D  RE+G   +VN M++ ESV+ RL       LSF EF Y +LQ Y
Sbjct: 120 MVNNYDWMKDFTFLDFAREVGKHITVNYMMAKESVQQRLNGTARDGLSFTEFTYQLLQGY 179

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKL--FALTSPLLTTASGTKMGKT 240
           DF+ L ++Y  +LQ+GG+DQWGN+  G +L  R    ++  FALT PL+T + G K GKT
Sbjct: 180 DFLYLYQHYGVKLQLGGNDQWGNMTTGTELIRRTLGNEVETFALTCPLITKSDGKKFGKT 239

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEA 298
            SG IWL+   T+PY F+Q+W N+ D D   + K  T+L    ID + +   ++      
Sbjct: 240 ESGNIWLDPVRTTPYKFYQFWLNVSDDDAERYIKIFTSLEKDVIDALIEEHKQDPGRRVL 299

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKD 344
           +K +A E+T +VH +E  + A  A+   F  S                   +P   ISKD
Sbjct: 300 QKRLAEEVTVLVHSKEALDTAIEASNILFGKSTKEGLEKLDEQTLLDVFDGVPQFEISKD 359

Query: 345 EVSRGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
           ++  G   + L+   A    S  E R+ ++   + +N   I+++   I  +D      + 
Sbjct: 360 QL--GQPAIELLTTVAPVFPSKGEMRKMVQGGGVSLNKEKITDQNRAITAEDLIDGKYLL 417

Query: 404 LSFGKKNHIIC 414
              GKKN+ + 
Sbjct: 418 AQKGKKNYYLL 428


>gi|126435549|ref|YP_001071240.1| tyrosyl-tRNA synthetase [Mycobacterium sp. JLS]
 gi|189083660|sp|A3Q0S2|SYY_MYCSJ RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|126235349|gb|ABN98749.1| tyrosyl-tRNA synthetase [Mycobacterium sp. JLS]
          Length = 423

 Score =  473 bits (1219), Expect = e-131,   Method: Composition-based stats.
 Identities = 143/421 (33%), Positives = 228/421 (54%), Gaps = 13/421 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S  L  L  RG I Q ++   L    + G +T Y G+D TA SLHAGHL  L+ L   Q+
Sbjct: 2   SSILDELDWRGLIAQSTDRDALAAELAAGPMTLYSGFDPTAPSLHAGHLVPLLTLRRFQQ 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+PI L GG T +IGDP    E R +  +  + +  ++I+G    F+++    T A++
Sbjct: 62  AGHRPIVLAGGATGMIGDPRDTGE-RTLQTADTVADWADRIRGQLERFVEFDESPTGAIV 120

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
            NN +W  ++  I+ LR++G +FSVN ML  ++VR RL+  + +S+ EF+YM+LQA D+V
Sbjct: 121 ENNLSWTGALSTIEFLRDVGKYFSVNVMLDRDTVRRRLE-GEGISYTEFSYMLLQANDYV 179

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT-LSGA 244
           +L K + C LQ+GGSDQWGNI+ G+ L  +     + A+T+PL+T + G K GK+   G 
Sbjct: 180 QLRKRHGCALQIGGSDQWGNIVAGVRLVRQKLGDTVHAMTTPLVTDSEGKKFGKSTGGGN 239

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKII 302
           +WL+ EMT+PY ++QY+ N  DADVV++ +  T L   E+  + +          A++ +
Sbjct: 240 LWLDPEMTTPYAWYQYFINTADADVVNYLRWFTFLEAGELGELEEATRDRPHQRTAQRRL 299

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSI--------HSQHMPTISISKDEVSRGMGLLT 354
           A E+TT+VHG +       A+   F             +  +   S+++   S    +  
Sbjct: 300 ARELTTLVHGEDATRSVEHASQALFGRGELAALDEPTLAAALREASVAELTPSGPDLITD 359

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           L+V  G + S   ARR +    + +NN  I +++   +  DF     + L  GK+N    
Sbjct: 360 LLVATGLSASKGAARRTIAEGGVSVNNVKIDSDEWTPQASDFLHGRWLVLRRGKRNIAGV 419

Query: 415 H 415
            
Sbjct: 420 Q 420


>gi|297583580|ref|YP_003699360.1| tyrosyl-tRNA synthetase [Bacillus selenitireducens MLS10]
 gi|297142037|gb|ADH98794.1| tyrosyl-tRNA synthetase [Bacillus selenitireducens MLS10]
          Length = 424

 Score =  473 bits (1219), Expect = e-131,   Method: Composition-based stats.
 Identities = 151/428 (35%), Positives = 218/428 (50%), Gaps = 26/428 (6%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG +HQ+++   L  L  Q  V  Y G+D T  SLH GHL  +++L   Q  
Sbjct: 2   NLIEDLQYRGLMHQVTDEEGLKRLLEQEQVKLYCGFDPTGDSLHIGHLLTILMLRRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP  L+GG T +IGDPS +   R +   + ++  +EKI+G    F+ +  G   A M 
Sbjct: 62  GHKPFPLVGGATGLIGDPSGKKAERTLNEQEVVEGFVEKIQGQLQRFLDF-EGANAAEMK 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL S+   D LR++G  FSVN ML+ +SV SR+  +  +SF EF Y ILQ+YDF +
Sbjct: 121 NNYDWLGSMTLTDFLRDVGKHFSVNYMLAKDSVESRI--QTGISFTEFTYQILQSYDFHK 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKT------PKLFALTSPLLTTASGTKMGKT 240
           L      +LQ+GGSDQWGNI  G++L  RL        P  +  T PL+T A G K GK+
Sbjct: 179 LYTEEQVKLQIGGSDQWGNITAGLELIRRLSGGEEGERPDAYGFTIPLVTKADGEKFGKS 238

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEA 298
             GAIWL+ E TSPY F+Q+  N DD+DV+ F K  T L   EID       +     +A
Sbjct: 239 EGGAIWLDPEKTSPYEFYQFLLNTDDSDVIRFLKYFTFLEKQEIDALETEVQERPHERQA 298

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQ-----------HMPTISISKDEVS 347
           +K +A E+T  VH     +KA       F      +            +P   + + +  
Sbjct: 299 QKKLAEELTRFVHDEAALDKAQNITNALFGGGDLKELTADEVQEGFKDVPGFEVDQPD-- 356

Query: 348 RGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFG 407
               LL ++V+A  A+S  +AR  +++ AI +N     + +  +   D        L  G
Sbjct: 357 --KLLLDVLVEAKVASSKRQAREDIQNGAIYLNGDRCQDLQKTLGEDDKIDGAFTVLRRG 414

Query: 408 KKNHIICH 415
           KK   + H
Sbjct: 415 KKKFFLIH 422


>gi|300933445|ref|ZP_07148701.1| hypothetical protein CresD4_05200 [Corynebacterium resistens DSM
           45100]
          Length = 432

 Score =  473 bits (1219), Expect = e-131,   Method: Composition-based stats.
 Identities = 149/429 (34%), Positives = 233/429 (54%), Gaps = 19/429 (4%)

Query: 3   AFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
           + + + +  L  RG + Q +    L     +     Y+G+D T  SLHAGHL  L+LL  
Sbjct: 6   SVRENLIDELEWRGLVAQSTELEALREQLDK-PTAVYVGFDPTGPSLHAGHLVPLLLLRR 64

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKT- 121
            Q  GHKP +L GG T +IGDP    E R M+  +++ +N+E+IKG   +F+++    T 
Sbjct: 65  FQLAGHKPFALAGGATGMIGDPRDVGE-RSMLTEEQVADNLERIKGQLRAFLRFEGDATA 123

Query: 122 ----DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYM 177
                A ++NN  W   +  ID LR++G  FS+N MLS ++V+ RL+ +  +S+ EF+YM
Sbjct: 124 EDVQGAKLVNNAEWTLKMSVIDFLRDLGKNFSLNTMLSRDTVKRRLEND-GISYTEFSYM 182

Query: 178 ILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
           +LQA DFV L + +D R+Q GGSDQWGNI+ G+DL  RL    +  LT PL+T + G K 
Sbjct: 183 LLQANDFVHLRREHDVRVQAGGSDQWGNIVSGVDLNRRLDGESVHGLTVPLVTDSEGNKF 242

Query: 238 GKTLSGA-IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI- 295
           GK+  G  +WL+ EMTSPY+++QY+ N  DADV+ + +  T L   EI+R+     +   
Sbjct: 243 GKSTGGGKLWLDPEMTSPYSWYQYFFNSADADVIRYLRWFTFLGREEIERLEGEVAERPF 302

Query: 296 -NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISK-------DEVS 347
             EA++++A E+T +VHG E   K   AA   F  +  +  +   +++         +VS
Sbjct: 303 KREAQRVLAQEMTKLVHGEEAVAKVELAAQALFGRAELA-DLDESTLAAALQETEVADVS 361

Query: 348 RGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFG 407
               ++ L+V +G  +S   ARR +      +NN  I + +     +D      + L  G
Sbjct: 362 ADATIVDLLVASGLESSKGAARRTVNEGGAYVNNVRIEDVEWVPGAEDMLHGSWLVLRKG 421

Query: 408 KKNHIICHL 416
           KK      +
Sbjct: 422 KKRFAGAKV 430


>gi|227510794|ref|ZP_03940843.1| tyrosine-tRNA ligase [Lactobacillus brevis subsp. gravesensis ATCC
           27305]
 gi|227189733|gb|EEI69800.1| tyrosine-tRNA ligase [Lactobacillus brevis subsp. gravesensis ATCC
           27305]
          Length = 420

 Score =  473 bits (1219), Expect = e-131,   Method: Composition-based stats.
 Identities = 136/421 (32%), Positives = 217/421 (51%), Gaps = 15/421 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG ++Q ++   L  L     ++ Y G D T  S+H GHL   M++   +  
Sbjct: 4   NIIDELKWRGAVNQQTDAEGLKNLTEHNSISLYCGVDPTGDSMHIGHLIPFMMMKRFELA 63

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P  L+GG T  IGDPS R   R++   +++Q N++ +            G ++   +
Sbjct: 64  GHHPYILIGGATGSIGDPSGRKSERQLQTMEKVQHNVDALTRQMKRLF---GGDSNITFV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  I  +D LR+ G   ++N ML+ + V SRL  +  +SF EF Y ILQ+ DF+ 
Sbjct: 121 NNYDWLSKISLLDFLRDYGKLVNINTMLAKDIVASRL--DVGISFTEFTYQILQSVDFLT 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSGA 244
           L   Y+ +LQ+GG+DQWGNI  GID+  ++K P  +++ LT PL+  A GTK GKT  GA
Sbjct: 179 LYSKYNVQLQIGGADQWGNITAGIDMIHKIKGPETQVYGLTIPLMLKADGTKFGKTAGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKII 302
           IWL+ + TSPY F+Q+W N DD DVV + K  T L   EI  +AK   +   E  A++ +
Sbjct: 239 IWLDPKKTSPYEFYQFWLNQDDRDVVKYLKYFTFLSQDEISELAKSVKEHPEERLAQRRL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV------SRGMGLLTLI 356
           A E+T  VHG+E    +   +   F   I   ++  +  +  +       S    ++ L+
Sbjct: 299 AEEVTRFVHGQEALTTSEKISDILFSGDITKLNVAEVQDAFGKAPSVEIKSDPKNIVDLL 358

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V      S  +AR  + + AI +N S + + +  +   +      + +  GKK + +  +
Sbjct: 359 VDTEIEPSKRQAREDVTNGAITVNGSKVEDTEHIVDPTNHFEGKFVIVRRGKKTYFLARV 418

Query: 417 C 417
            
Sbjct: 419 T 419


>gi|71083438|ref|YP_266157.1| tyrosyl-tRNA synthetase [Candidatus Pelagibacter ubique HTCC1062]
 gi|97201784|sp|Q4FMN5|SYY_PELUB RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|71062551|gb|AAZ21554.1| tyrosyl-tRNA synthetase [Candidatus Pelagibacter ubique HTCC1062]
          Length = 409

 Score =  473 bits (1219), Expect = e-131,   Method: Composition-based stats.
 Identities = 189/409 (46%), Positives = 268/409 (65%), Gaps = 4/409 (0%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           FL    +RGF +Q +    L  L  +  + AYIG+D TA SLH G L Q+M L  LQK G
Sbjct: 4   FLKEFKDRGFFYQCTGEENLSQLLDKEKIRAYIGFDCTAESLHVGSLLQIMCLRLLQKHG 63

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+PI L+GGGT+ IGDPS +D++R ++   EI++NI  I+ I  +F+     +T  + +N
Sbjct: 64  HQPIVLLGGGTTRIGDPSGKDKTRTILSEDEIEKNINNIEKILKNFLDDKDPETKPIFVN 123

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N TWL ++ YI  LR++G  F++N+MLSF+SV+ RL+REQSLS++EFNYMILQAYDF+EL
Sbjct: 124 NYTWLKNLNYISFLRDVGKHFTINKMLSFDSVKIRLEREQSLSYMEFNYMILQAYDFLEL 183

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            K   C LQ+GGSDQWGNI+ G+DL +R     ++ LT+PL+T ASG KMGKT SGA+WL
Sbjct: 184 NKKEKCMLQIGGSDQWGNIVNGVDLIKRYSNNHVYGLTTPLITLASGAKMGKTESGAVWL 243

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           +K+  S Y++WQ+WRNIDD DV+ F K  T + + EI+    ++   INE K ++A + T
Sbjct: 244 DKKFLSSYDYWQFWRNIDDRDVLKFLKIFTDINVDEIE---NIKDDNINELKILLANKAT 300

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
           +M+HG +EA K    A + F  +    ++PT  I+K  +   + +L L++ +   +S +E
Sbjct: 301 SMLHGEDEARKCQETAKQTFSENSLGDNLPTTQINKKMLDDNISILDLVILSKLESSKSE 360

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            RR +K N IKIN   IS+EK  I  +D   +  IKLS GKK HI   L
Sbjct: 361 IRRLIKGNGIKINGQAISDEKFLIT-EDLFKSSLIKLSLGKKKHIKVEL 408


>gi|302866882|ref|YP_003835519.1| tyrosyl-tRNA synthetase [Micromonospora aurantiaca ATCC 27029]
 gi|302569741|gb|ADL45943.1| tyrosyl-tRNA synthetase [Micromonospora aurantiaca ATCC 27029]
          Length = 429

 Score =  473 bits (1219), Expect = e-131,   Method: Composition-based stats.
 Identities = 145/426 (34%), Positives = 222/426 (52%), Gaps = 12/426 (2%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           +P  +      L  RG I   +   EL  L   G  T Y+G+D TA SLH G+L Q+++ 
Sbjct: 8   LPQGRDSLTDDLLWRGLIQDSTGLDELRELLDGGSTTFYVGFDPTAPSLHIGNLMQVVMA 67

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             LQ+ GH+P+ L+GG T  IGDP      R +   + I   +E+I+   S F+ Y +G+
Sbjct: 68  RRLQQAGHRPLLLVGGATGQIGDPK-ESAERTLNPPEVIAGWVERIREQLSPFVTY-SGE 125

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
             A ++NN  W   +  ++ LR++G  F VN+ML+ E V++RL  E  +S+ EF+Y +LQ
Sbjct: 126 NAAQLVNNLDWTGEMSVVEFLRDVGKHFPVNKMLAREVVKARL--ETGISYTEFSYQLLQ 183

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           A D+ EL + + CRLQ GGSDQWGNI  G+D   R     + A T+PL+T A GTK GK+
Sbjct: 184 ANDYFELHRRHGCRLQYGGSDQWGNITAGVDYIRRRGAGPVEAFTTPLVTKADGTKFGKS 243

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEA 298
            +G IWL+ +MTSPY F+Q+W N DD DV  + +  +     E++ + K   +  +   A
Sbjct: 244 ETGTIWLDPQMTSPYAFYQFWVNADDRDVSRYLRYFSFRSREELEELEKATAERPQARLA 303

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPT------ISISKDEVSRGMGL 352
           ++ +A E+TT+VHG  E  +A  A+   F      +  P              +     +
Sbjct: 304 QRALAEELTTLVHGERETAQAVAASQALFGRGSLDELAPETLRAALTEAGLVHLDELPDV 363

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
             L+ ++G   S  EARR +      +NN+ IS     +   D      + L  GK++  
Sbjct: 364 AGLLKESGLVPSMKEARRVIAEGGAYVNNTRISEVDATVSADDLLHGRYLVLRRGKRSFA 423

Query: 413 ICHLCG 418
              L G
Sbjct: 424 GVELRG 429


>gi|86134694|ref|ZP_01053276.1| Tyrosyl-tRNA synthetase [Polaribacter sp. MED152]
 gi|85821557|gb|EAQ42704.1| Tyrosyl-tRNA synthetase [Polaribacter sp. MED152]
          Length = 430

 Score =  473 bits (1219), Expect = e-131,   Method: Composition-based stats.
 Identities = 144/432 (33%), Positives = 227/432 (52%), Gaps = 23/432 (5%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
            +F+  L  RG +H      E      + + +AY+G+D TA SLH G+L  +MLL   Q+
Sbjct: 2   KNFIEELQWRGMLHDSMPGTE--EHLLEEMRSAYVGFDPTADSLHIGNLVPIMLLAHYQR 59

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+PI+L+GG T +IGDPS +   R ++    ++ N E +K     F+ + + + +A +
Sbjct: 60  CGHRPIALVGGATGMIGDPSGKSAERNLLDETTLRHNQECVKAQLGHFLDFTSNEKNAAI 119

Query: 126 -LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQAY 182
            +NN  W+  I +++ +R+IG   +VN M++ +SV++R+  E    +SF EF Y ++Q Y
Sbjct: 120 LVNNYDWMKDISFLEFIRDIGKHITVNYMMAKDSVKNRISSESKDGMSFTEFTYQMVQGY 179

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DF+ L +     +QMGGSDQWGNI  G +L  R+   K +A+T PL+T + G+K GK+  
Sbjct: 180 DFLHLFRENSTTIQMGGSDQWGNITTGTELIRRIGNGKGYAITCPLITKSDGSKFGKSEG 239

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKK 300
           G +WL+   TSPY F+QYW N  D D   + K  T L    ID +     +  +    +K
Sbjct: 240 GNVWLDANRTSPYKFYQYWLNTSDEDAEKYIKIFTFLDKETIDALVAEHKEAPHTRILQK 299

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDEV 346
            +  E+T +VHG++E EKA  A+   F  S  S                +P  +++   V
Sbjct: 300 RLGEEVTVLVHGKDEYEKAIKASNILFGKSTASDLKSLDEKTLLDIFDGVPQATVTASLV 359

Query: 347 SRGMG-LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLS 405
             G+  +  L  +  F  S  EARR LK NAI +N   +  E   I  +D      + L 
Sbjct: 360 ENGLDMIAALAAETNFLKSNGEARRALKENAISVNKEKVK-EDFVITKEDLIDKKYVLLQ 418

Query: 406 FGKKNHIICHLC 417
            GKK + +  + 
Sbjct: 419 RGKKTYYLLIVA 430


>gi|325102913|ref|YP_004272567.1| tyrosyl-tRNA synthetase [Pedobacter saltans DSM 12145]
 gi|324971761|gb|ADY50745.1| tyrosyl-tRNA synthetase [Pedobacter saltans DSM 12145]
          Length = 427

 Score =  473 bits (1218), Expect = e-131,   Method: Composition-based stats.
 Identities = 135/425 (31%), Positives = 223/425 (52%), Gaps = 19/425 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG I  I    E +   S+G+V+ YIG+D TA SLH G L+Q+  L   Q+ 
Sbjct: 2   NFVEDLRWRGLIQDIMPGTEEE--LSKGMVSGYIGFDPTAESLHVGSLSQIFTLVRFQQA 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP++L+GG T +IGDP+ + + R ++  +E+ +N++ I+     F+ +  G   A ++
Sbjct: 60  GHKPLALVGGATGMIGDPTGKSQERNLLSEEELAKNLKGIQKQLEQFLDFDCGANSAEIV 119

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W  +  ++D +R+ G   +VN M++ +SV+ RL+ E  +SF EF Y ++Q +DF  
Sbjct: 120 NNYDWFKNYSFLDFIRDAGKHITVNYMMAKDSVKKRLESEVGMSFTEFTYQLIQGFDFYH 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L K  + +LQMGGSDQWGNI+ G +   R    + FALTSPL+  A GTK GKT  G IW
Sbjct: 180 LWKERNVKLQMGGSDQWGNIVTGTEFIRRKAQGQAFALTSPLIKKADGTKFGKTEGGNIW 239

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKKIIAT 304
           L+ + TSPY F+Q+W N  D DV ++ K  T +   E+D +         +   +K +A 
Sbjct: 240 LDPKRTSPYQFYQFWLNATDEDVKNYIKIFTFMTKEEVDALIAEHDQAPHLRVLQKSLAE 299

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDEVSRGM 350
           +IT  VHG +  + A       F                    + +    + +  +  G+
Sbjct: 300 DITRRVHGEQALQTALKTTDFLFGNGSLEFLNALSDEEVIGVFEGIAQFKVDRSAIDSGV 359

Query: 351 GLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
            +++L+ +      S  EA++ ++   + IN   +    + +   +  +   I    GKK
Sbjct: 360 DVVSLLAEKTQIFPSKGEAKKMIQGGGVSINREKVGGPDVIVSTANLVNNKFIVAQKGKK 419

Query: 410 NHIIC 414
           N+ + 
Sbjct: 420 NYFLI 424


>gi|255533200|ref|YP_003093572.1| tyrosyl-tRNA synthetase [Pedobacter heparinus DSM 2366]
 gi|255346184|gb|ACU05510.1| tyrosyl-tRNA synthetase [Pedobacter heparinus DSM 2366]
          Length = 428

 Score =  473 bits (1218), Expect = e-131,   Method: Composition-based stats.
 Identities = 143/426 (33%), Positives = 224/426 (52%), Gaps = 19/426 (4%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           ++F+  L  RG +  +    E     ++G+   YIG+D TA SLH GHLTQ+M L   Q+
Sbjct: 2   TNFVEELRWRGMLQDMMPGTE--EKLNEGMTAGYIGFDPTADSLHVGHLTQIMTLIHFQR 59

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP +L+GG T ++GDPS +   R +     ++ N+  +K   S F+K+      A+M
Sbjct: 60  AGHKPYALVGGATGMVGDPSGKSAERNLQTEDMVEHNLAGMKRQLSRFLKFEAAGNGAVM 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  W   +   D +R+IG   +VN M++ +SV+ RL+ +  LSF EF Y ++Q YDF 
Sbjct: 120 INNADWFKDMGLFDFIRDIGKHITVNYMMAKDSVKRRLEGDSGLSFTEFCYQLIQGYDFY 179

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L K+++C +QMGGSDQWGNI+ G +L  R      +A+T+ L+  A GTK GKT SGA+
Sbjct: 180 YLWKHHNCLVQMGGSDQWGNIVTGTELIRRKDAGTAYAITTHLIKKADGTKFGKTESGAV 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIA 303
           WL+ E TSPY F+Q+W N  D D   + +  T     EI+ +         +   +K +A
Sbjct: 240 WLDAEKTSPYKFYQFWLNASDDDTKKWIRIFTLKTKEEIETLENEHNAAPHLRILQKALA 299

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDEVSRG 349
            +IT   H  E  E A   +   F                    + +P  +ISKDE+ +G
Sbjct: 300 EDITIRTHSEEALETALKTSDFLFGNGSLEFFKTLSVAQVFEIFEGIPQFAISKDELEQG 359

Query: 350 MGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGK 408
           +   TL+ + +    S  EA++ ++   + IN   + +   Q+   D  +   I +  GK
Sbjct: 360 IDAATLLAEKSSVFASKGEAKKLIQGGGVSINKEKLKDPTDQLSATDLLNGQFIVVQKGK 419

Query: 409 KNHIIC 414
           KN+ + 
Sbjct: 420 KNYYLL 425


>gi|262193438|ref|YP_003264647.1| tyrosyl-tRNA synthetase [Haliangium ochraceum DSM 14365]
 gi|262076785|gb|ACY12754.1| tyrosyl-tRNA synthetase [Haliangium ochraceum DSM 14365]
          Length = 432

 Score =  473 bits (1218), Expect = e-131,   Method: Composition-based stats.
 Identities = 155/430 (36%), Positives = 235/430 (54%), Gaps = 15/430 (3%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M + K   +  L  R  +  +S+  EL  L     ++ Y GYD TA+SLH G+L   ++L
Sbjct: 1   MSS-KMTIIDELETRHLLQDVSHREELGELLQGEAISVYAGYDPTATSLHVGNLIPTIIL 59

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             LQ+ G +PI+L+GG T +IGDP+ + + R ++    +Q N+  I+     F  +    
Sbjct: 60  ARLQRIGCRPIALVGGATGMIGDPTGKSDERNLLDEDTLQANVAAIRAQLGRFFDFDDSA 119

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK-REQSLSFLEFNYMIL 179
           T A ++NN  W   I +I  LR+IG   +VN M + +SVRSRL+ R   +S+ EF+YM+L
Sbjct: 120 TGAKLVNNLDWFRDIGFIPFLRDIGKLLTVNYMTAKDSVRSRLEDRATGISYTEFSYMLL 179

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK 239
           QAYDFV LAK + CRLQ+GGSDQWGNI  GI+L  +L    ++ LT PLL  +SG KMGK
Sbjct: 180 QAYDFVHLAKEHGCRLQVGGSDQWGNITAGIELQRKLGRESVYGLTGPLLLDSSGEKMGK 239

Query: 240 TLSGA-IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--N 296
           T SG  IWL+ E TSPY F+QYW N  D DV    +  +   + EID + +  G+     
Sbjct: 240 TASGMRIWLDPERTSPYAFYQYWLNTPDDDVARLLRVFSWRSLDEIDELVRAHGEAPQKR 299

Query: 297 EAKKIIATEITTMVHGREEAEKAATAAMECFDMSI----------HSQHMPTISISKDEV 346
             +  +A ++T  VHG E    A  A+   F  S+           +  +PT S+ + ++
Sbjct: 300 LGQSALAEDLTDWVHGEEAKRNALAASQVMFGGSLENLNDAALQPLTADLPTTSLPRQQL 359

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
             G+ LL L+ +   A S   ARR ++   + +NN  +++    +  +D  +   + L  
Sbjct: 360 ESGIPLLELLAQTKLAASKGAARRLVQGGGVYVNNIRVADVNKTLLPEDLGTETIMILRA 419

Query: 407 GKKNHIICHL 416
           GKKN+ +   
Sbjct: 420 GKKNYHLVQF 429


>gi|223044443|ref|ZP_03614475.1| tyrosyl-tRNA synthetase [Staphylococcus capitis SK14]
 gi|222442172|gb|EEE48285.1| tyrosyl-tRNA synthetase [Staphylococcus capitis SK14]
          Length = 417

 Score =  473 bits (1218), Expect = e-131,   Method: Composition-based stats.
 Identities = 141/420 (33%), Positives = 214/420 (50%), Gaps = 15/420 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  R  I+Q +N   L  L     ++ Y G D T  S+H GHL   M++   Q  
Sbjct: 2   NIIDELQWRDAINQQTNEEGLRELVENNSISLYCGVDPTGGSMHIGHLIPFMMMKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP  L+GG T  IGDPS R   R +   + +QEN+E +        K      +  ++
Sbjct: 62  GHKPFILIGGATGTIGDPSGRTSERMLQTLETVQENVEGLSSQMK---KLFGKDANVTIV 118

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL S+  +D LR  G  F++N ML+ + V SRL  ++ +SF EF Y ILQ+ DF+ 
Sbjct: 119 NNYDWLSSLTLLDFLRSYGKDFNINTMLAKDIVASRL--DKGISFTEFAYQILQSIDFLH 176

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKLFALTSPLLTTASGTKMGKTLSGA 244
           L KN++ +LQ+GG+DQWGNI  G+DL  + +    K+F LT PL+  A GTK GKT  GA
Sbjct: 177 LFKNHNVQLQIGGADQWGNITSGLDLIRKKEGNDAKVFGLTIPLMLKADGTKFGKTAGGA 236

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKII 302
           IWL+ + TSPY F+Q+W N DD DV+ + K  T L   EID          E  EA+K +
Sbjct: 237 IWLDPKRTSPYEFYQFWLNQDDRDVIKYLKFFTFLDKEEIDFLEEKVKNEPEKREAQKRL 296

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRGMGLLTLI 356
           A E+T  VH     ++A       F  ++    +  I        S +  ++   ++  +
Sbjct: 297 AEEVTKFVHDEAALQEAQKITQALFSGNVKDLTVKEIEQGLQNMPSFNTTNKTKNIVDWL 356

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V+     S  +AR  + + AI IN   +++    +          + +  GK+N+ +  +
Sbjct: 357 VEINCEPSKRQAREDVINGAININGEKVTDINFLVNPNSAFEGKYMIIRKGKRNYFLVKV 416


>gi|262383070|ref|ZP_06076207.1| tyrosyl-tRNA synthetase [Bacteroides sp. 2_1_33B]
 gi|262295948|gb|EEY83879.1| tyrosyl-tRNA synthetase [Bacteroides sp. 2_1_33B]
          Length = 430

 Score =  473 bits (1218), Expect = e-131,   Method: Composition-based stats.
 Identities = 144/428 (33%), Positives = 223/428 (52%), Gaps = 22/428 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG I  +    E      + + +AY+G D TA SLH GHL  +M+L   Q+ 
Sbjct: 2   NFVEELRWRGMIADMMPGTE--EQLQKELTSAYVGIDPTADSLHIGHLVSVMMLKHFQRA 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG-TGKTDALM 125
           GH+PI+L+GG T +IGDPS +   R ++    ++ N + IK   + F+ +       A +
Sbjct: 60  GHRPIALVGGATGMIGDPSMKSAERNLLDEATLRHNQDCIKKQLAKFLDFDSDAPNAAKL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ--SLSFLEFNYMILQAYD 183
           +NN  W+    +++ +R+IG   +VN M++ +SV+ RL RE    +SF EF+Y +LQ YD
Sbjct: 120 VNNYDWMKDYSFLNFIRDIGKHITVNYMMAKDSVKKRLSRESSVGMSFTEFSYQLLQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           ++ L ++  CRLQMGG+DQWGNI  G +L  R    + +ALT PL+T A G K GKT SG
Sbjct: 180 YLYLYEHEGCRLQMGGTDQWGNITTGTELIRRTLGGEAYALTCPLITKADGGKFGKTESG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPM--SEIDRMAKLQGKEINEAKKI 301
            IWL++  TSPY F+Q+W N+ DAD   + K  T L           +     +   +K 
Sbjct: 240 NIWLDRRYTSPYKFYQFWLNVSDADAAKYIKIFTDLSQEEIAALEAEQEAAPHLRPLQKR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDEVS 347
           +A E+T MVH  E+ E A  A+   F  S H               + +P   IS+DE++
Sbjct: 300 LAKEVTVMVHSLEDYEAAVEASNILFGNSTHEALLKLDEDTLLAVFEGVPHFDISRDELA 359

Query: 348 RGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+  + L  + A    S  E R+ ++S  +  N   ++     I          + +  
Sbjct: 360 AGIKAVDLCTEKAAIFPSKGEMRKLVQSGGVSFNKEKLAEVDTVIDCSSLLDDKYLLVQR 419

Query: 407 GKKNHIIC 414
           GKKN+ + 
Sbjct: 420 GKKNYYLL 427


>gi|313204305|ref|YP_004042962.1| tyrosyL-tRNA synthetase [Paludibacter propionicigenes WB4]
 gi|312443621|gb|ADQ79977.1| tyrosyl-tRNA synthetase [Paludibacter propionicigenes WB4]
          Length = 430

 Score =  473 bits (1218), Expect = e-131,   Method: Composition-based stats.
 Identities = 144/428 (33%), Positives = 228/428 (53%), Gaps = 22/428 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG IH +    E     ++ V +AYIG+D TA SLH G L  ++LL   Q  
Sbjct: 2   NFIEDLEWRGVIHTMMPGTE--EQLAKEVTSAYIGFDPTADSLHIGSLAPILLLKRFQLA 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG-KTDALM 125
           GHKPI+L+GG T +IGDPS + + R ++  + +++N+  I+   + F+ + T     A M
Sbjct: 60  GHKPIALVGGATGMIGDPSGKSQERNLLNEETLEKNLAGIRKQLAKFLDFETESPNKAEM 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ--SLSFLEFNYMILQAYD 183
           +NN  W+    ++  +R+IG   +VN M++ +SV+ RL  E    +SF EF Y ++Q YD
Sbjct: 120 VNNYDWMKEQTFLSFIRDIGKHITVNYMMAKDSVKKRLTGETRDGMSFTEFTYQLVQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F  L +N +C+LQMGGSDQWGNI  G +L  R  + + +ALT  L+T A G K GKT SG
Sbjct: 180 FYWLYENMNCKLQMGGSDQWGNITTGTELIRRKASGEAYALTINLITKADGGKFGKTESG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKKI 301
            +WL+ E T+PY F+Q+W N  D D   + +  T +   EI+ + +       + E +K 
Sbjct: 240 NVWLDPEKTTPYAFYQFWLNTADVDAEKYIRVFTFMSKEEIEELIERHRQAPHLRELQKK 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDEVS 347
           +A +IT MVH  E+   A  A+   F  +                   +P   ISK E+ 
Sbjct: 300 LAHDITIMVHSEEDYNAAVEASNILFGNATSDALKKLDENTLLAVFDGVPQFKISKKELE 359

Query: 348 RGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+ ++ L+ + A    S  E R+ ++S  + IN   + N+   +      +   + +  
Sbjct: 360 EGVKVIDLLTEKAAIFPSKGEMRKLVQSGGVSINKEKLDNQDEVLDGSKLLNNKYLLIQK 419

Query: 407 GKKNHIIC 414
           GKKN+ + 
Sbjct: 420 GKKNYFLL 427


>gi|296119701|ref|ZP_06838259.1| tyrosine--tRNA ligase [Corynebacterium ammoniagenes DSM 20306]
 gi|295967584|gb|EFG80851.1| tyrosine--tRNA ligase [Corynebacterium ammoniagenes DSM 20306]
          Length = 421

 Score =  473 bits (1218), Expect = e-131,   Method: Composition-based stats.
 Identities = 153/420 (36%), Positives = 229/420 (54%), Gaps = 15/420 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG I+Q ++   L   C +  +  Y+G+D T  SLHAGHL  +++L   Q+ 
Sbjct: 2   NIIDELQWRGLINQSTDIDALREAC-EQPIALYVGFDPTGDSLHAGHLVPMIMLRRFQEA 60

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP++L GG T  IGDP    E R M+   EI  N+E IK     F+ +  G   A+M+
Sbjct: 61  GHKPLALAGGATGFIGDPRDVGE-RSMLSQDEIDNNLEAIKKQLRQFVDF-DGDNPAIMV 118

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W  ++  ID LR++G  FS+N ML  ++V+ RL+ +  +S+ EF+YM+LQA DFV+
Sbjct: 119 NNADWTMNMSVIDFLRDVGKNFSLNTMLDRDTVKRRLETD-GISYTEFSYMLLQANDFVQ 177

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA-I 245
           L + YDC LQ+GG DQWGNI+ G+DL  R+   K  ALT PL+T A G K GK+  G  +
Sbjct: 178 LQRKYDCVLQVGGGDQWGNIVSGVDLNRRVDGVKAHALTCPLVTDAQGQKFGKSTGGGKL 237

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIA 303
           WL+ E TS Y+++QY+ N  D+ V+ + +  T L   EI   AK   +E     A++ +A
Sbjct: 238 WLDPEKTSAYSWYQYFLNAGDSVVIDYLRWFTFLNQEEIAEYAKAVEEEPFKRAAQRRLA 297

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQ--------HMPTISISKDEVSRGMGLLTL 355
            E+T +VHG E  +    AA   F  +  S          +   ++++       G++ L
Sbjct: 298 QEMTNLVHGNEATQAVELAAQALFGRAELSDLDEKTLEGALSETNVAELGDDDSFGIVDL 357

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +V +G A S   ARR +K     +NN  I ++       DF     + +  GKKN    H
Sbjct: 358 LVASGLADSKGAARRTIKEGGAYVNNQRIESDDWTPAEDDFLHGAWLVMRRGKKNFAGIH 417


>gi|209694434|ref|YP_002262362.1| tyrosyl-tRNA synthetase [Aliivibrio salmonicida LFI1238]
 gi|254783564|sp|B6EHW3|SYY_ALISL RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|208008385|emb|CAQ78540.1| tyrosyl-tRNA synthetase [Aliivibrio salmonicida LFI1238]
          Length = 426

 Score =  473 bits (1218), Expect = e-131,   Method: Composition-based stats.
 Identities = 154/423 (36%), Positives = 228/423 (53%), Gaps = 19/423 (4%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M A  ++ L  L  RG I Q +   EL    S    T Y G+D TA SLH G L  L++L
Sbjct: 1   MTAT-NELLQDLKARGLIAQCTADEELAEHLSTDCRTLYCGFDPTADSLHIGSLVPLLVL 59

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GHKP++L+GG T +IGDPSF+   R++  S  + + + KI+   S+F+ +   K
Sbjct: 60  KRFQQAGHKPLALVGGATGLIGDPSFKAAERQLNTSDVVGDWVNKIRAQVSAFVDFNESK 119

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMIL 179
             A ++NN  W+  I  I+ +R+IG  FSVN M+  ESV+ R+ RE   +SF EF+YM+L
Sbjct: 120 NGAEVVNNLDWIGEINVIEFMRDIGKHFSVNSMIQKESVKQRIDREGSGISFTEFSYMLL 179

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK 239
           Q+YDF  L K  +C LQ+GGSDQWGNI  GIDL  R+   K+F LT PL+T + GTK GK
Sbjct: 180 QSYDFAALNKAKECTLQIGGSDQWGNITGGIDLTRRMNRNKVFGLTLPLVTKSDGTKFGK 239

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK-EINEA 298
           T SG IWL+   TSPY F+Q+W    DADV  F +  T L + EI    +     +   A
Sbjct: 240 TESGTIWLDPSKTSPYAFFQFWLGTADADVYDFLRFFTFLSVDEIAAFEESDKSVQGRPA 299

Query: 299 -KKIIATEITTMVHGREEAEKAATAAMECFDMSIHS-----------QHMPTISISKDEV 346
            + ++A E+T +VHG E    +       F   + S             +PT  +   E 
Sbjct: 300 GQGVLAKEVTRLVHGEEGLASSERITAALFSGDLASLTETDLAQLAQDGLPTTELEASE- 358

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
                ++ ++ ++  A S   AR  + + A+ +N   +++ ++ +K +D        +  
Sbjct: 359 ---QTIVEVLTQSELAKSNKMAREFIGNGAVSVNGEKVADAEVILKKEDALFGKYSVIKR 415

Query: 407 GKK 409
           GKK
Sbjct: 416 GKK 418


>gi|304440653|ref|ZP_07400537.1| tyrosine--tRNA ligase [Peptoniphilus duerdenii ATCC BAA-1640]
 gi|304370840|gb|EFM24462.1| tyrosine--tRNA ligase [Peptoniphilus duerdenii ATCC BAA-1640]
          Length = 427

 Score =  473 bits (1218), Expect = e-131,   Method: Composition-based stats.
 Identities = 167/413 (40%), Positives = 254/413 (61%), Gaps = 5/413 (1%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           K + + IL ERGFI Q+++  EL  L  +  V  YIG+D TA SL  GH  Q+ ++  +Q
Sbjct: 20  KMNVIDILEERGFIDQMTHEEELRDLLGKEKVKFYIGFDATADSLTLGHFLQIRVMQHMQ 79

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GH P++L+GGGT++IGDPS +++ R++M    I  N E  +   S F+ +  GK   +
Sbjct: 80  NAGHIPVALLGGGTTMIGDPSGKNDMRKVMTEDFINHNAECFRKQISHFLDFSEGKG--I 137

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           + NN+ WL  +K++  +REIG  FSVNRML+F+  ++R+  E  L+F EF YM++Q+YDF
Sbjct: 138 IENNKDWLLDLKFLPFMREIGVHFSVNRMLNFDCYKNRM--ENGLTFFEFGYMLMQSYDF 195

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           + L + +  +L++GGSDQW NII G +L  +L++  +F +T  LLTTASG KMGK+  GA
Sbjct: 196 LYLYRKHGVKLELGGSDQWSNIIGGYELVRKLESDLVFGMTFKLLTTASGQKMGKSEKGA 255

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           IWL++E TSPY  +QY RN DD DV+ F K LT LP+ +I    KL+G+E+N+AK+++A 
Sbjct: 256 IWLDREKTSPYEMFQYLRNSDDRDVIKFLKLLTMLPLEKIAEYEKLEGQELNKAKEVLAF 315

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E+   VHG E A++A  A+   F     S+++P   + +     G+G+L L+ K     S
Sbjct: 316 EVVKDVHGEEAAKEALEASKALFQGGADSENIPNEDMDRKIFEEGIGILDLMTKLNLTKS 375

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            +EARR ++   + I+   + +  L +K   F     I +  GKK H    L 
Sbjct: 376 NSEARRLIQGGGVSIDGEKVQDPNLVVKADMFKDDK-IIIQKGKKVHQRITLV 427


>gi|326804012|ref|YP_004321830.1| tyrosine--tRNA ligase [Aerococcus urinae ACS-120-V-Col10a]
 gi|326650892|gb|AEA01075.1| tyrosine--tRNA ligase [Aerococcus urinae ACS-120-V-Col10a]
          Length = 420

 Score =  473 bits (1218), Expect = e-131,   Method: Composition-based stats.
 Identities = 149/421 (35%), Positives = 215/421 (51%), Gaps = 21/421 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG I+Q ++   L        ++ Y G D T  SLH GHL   ++L   Q  
Sbjct: 2   NIIVELEWRGAINQQTDEAGLKDYVENHSISLYCGVDPTGDSLHIGHLIPFIMLKRFQLQ 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+P+ L+GG T  IGDPS R E R++   + + EN  K+                  ++
Sbjct: 62  GHRPVILIGGATGSIGDPSGRSEERQLQSMEVVNENARKLTAQMEKLF-LKDPNAQFRLV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   +  +D LR+ G  F++N ML+ + V SRL  E  +SF EF Y ILQ+ DF+ 
Sbjct: 121 NNYAWTKDLSLLDFLRDYGKLFNINTMLAKDVVASRL--EHGISFTEFTYQILQSMDFLH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSGA 244
           L +  D RLQ+GG+DQWGNI  G+DL  +++ P  K F LT PL+  A GTK GKT  GA
Sbjct: 179 LYREEDVRLQIGGADQWGNITSGLDLIRKVEGPEAKAFGLTIPLMLKADGTKFGKTAGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKII 302
           +WL+ E TSPY F+Q+W N DDADVV + K  T L   EI  +A+    E    EA+K +
Sbjct: 239 VWLDPEKTSPYEFYQFWVNQDDADVVKYLKYFTFLSKEEIAELAEKVATEPHKREAQKTL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGL 352
           A E+T  VHG E    A +     F   I +           +MP   + ++  +  + L
Sbjct: 299 AKEMTLFVHGEEGLADALSITEALFSGDIKNLSAKQIEQGFNNMPGAQVPRETANLAVWL 358

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           +      G  +S  ++R  +K+ AI IN   I +   +I   D      I +  GKK + 
Sbjct: 359 VD----NGVESSRRQSREDIKNGAIYINGERIQDIDYEISPADAIEDKYIVVRRGKKKYF 414

Query: 413 I 413
           +
Sbjct: 415 L 415


>gi|170781648|ref|YP_001709980.1| tyrosyl-tRNA synthetase [Clavibacter michiganensis subsp.
           sepedonicus]
 gi|169156216|emb|CAQ01358.1| tyrosyl-tRNA synthetase [Clavibacter michiganensis subsp.
           sepedonicus]
          Length = 442

 Score =  473 bits (1218), Expect = e-131,   Method: Composition-based stats.
 Identities = 142/423 (33%), Positives = 222/423 (52%), Gaps = 13/423 (3%)

Query: 2   PAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
           P+F+ D    +  RG++H  ++   L  L S   +T Y G+D TA SLH G+L QL+L+ 
Sbjct: 24  PSFE-DVWEEIVWRGYVHVSTDQDALKELLSGPPITYYCGFDPTAPSLHLGNLVQLVLMR 82

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKT 121
            LQ  GH+P+ L+GG T +IGDP      R +   + + E + +++   S+F+    G  
Sbjct: 83  RLQLAGHRPLGLVGGSTGLIGDPRP-TAERTLNTPEVVAEWVGRLQAQVSAFLSP-EGDN 140

Query: 122 DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA 181
              ++NN  W   +  ID LRE+G  F V  ML  ++V +RL  ++ +S+ EF+Y ILQ 
Sbjct: 141 AVRIVNNLDWTAPLSAIDFLREVGKHFRVGTMLKKDAVSARLNSDEGISYTEFSYQILQG 200

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            DF EL + Y C LQ GGSDQWGN+  G DL  R +     A+ +PL+T + GTK GK+ 
Sbjct: 201 LDFRELHRAYGCVLQTGGSDQWGNLTSGTDLIRRSERATAHAIGTPLITNSDGTKFGKSE 260

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAK 299
             A+WL+ E+TSPY F+Q+W N DD DV+   +  T L  + I+ + +    E    EA+
Sbjct: 261 GNAVWLDPELTSPYAFYQFWLNTDDGDVIHRLRVFTFLDRARIEELERAVASEPFRREAQ 320

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMS----IHSQHMPTI--SISKDEVSRGMGLL 353
           + +A E+T++VHG E  E A  AA   F       +    +  +   +   E++ G  ++
Sbjct: 321 RTLAWEVTSLVHGVEATESAIAAAQALFGQGELAALDEGTLEAVIRELPTAELAPGTTVI 380

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
             +V  G  +S  EARR +    + +NN+  +       + +        L  GKK    
Sbjct: 381 QALVDTGLVSSAGEARRAITQGGVYVNNA--AVTDAAAVVDELLHGRYAVLRRGKKTLAG 438

Query: 414 CHL 416
             +
Sbjct: 439 VTV 441


>gi|229916423|ref|YP_002885069.1| tyrosyl-tRNA synthetase [Exiguobacterium sp. AT1b]
 gi|229467852|gb|ACQ69624.1| tyrosyl-tRNA synthetase [Exiguobacterium sp. AT1b]
          Length = 415

 Score =  473 bits (1218), Expect = e-131,   Method: Composition-based stats.
 Identities = 145/417 (34%), Positives = 226/417 (54%), Gaps = 13/417 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + L  L  RG ++Q+++   L     +   T Y G+D TA SLH GHL  ++ L   Q+ 
Sbjct: 2   ELLKDLEFRGLVNQMTDEEGLKEQL-KQPTTLYTGFDPTADSLHIGHLLPILTLKRFQQA 60

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+ I+L+GG T +IGDPS R + R +     ++   ++IK   S F+    G+    + 
Sbjct: 61  GHQVIALVGGATGMIGDPSGRSDERSLNTLDTVKLFSDRIKDQLSRFL-PLEGENPITIR 119

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   +  ID LR+IG  F ++ ML+ +SV SR+  E  +S+ EF+YM+LQ+YDF++
Sbjct: 120 NNYEWTEEMSIIDFLRDIGKHFPISYMLAKDSVDSRM--ENGISYTEFSYMLLQSYDFLK 177

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASGTKMGKTLSGAI 245
           L +   CRLQ+GGSDQWGNI  G++L  R   + K F LT PL+T + G K GKT  GA+
Sbjct: 178 LYETEKCRLQVGGSDQWGNITAGLELIRRFGHSEKAFGLTVPLVTKSDGQKFGKTAGGAV 237

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIA 303
           WL+ + TSPY F+Q+W N+DDADV+ F K  T +   EI+ +A    +  E   A++ +A
Sbjct: 238 WLDADKTSPYEFFQFWINVDDADVIKFIKYFTFMSHEEIEALATEVTEAPEKRVAQRRLA 297

Query: 304 TEITTMVHGREEAEKAATAAMECFDM---SIHSQHMPTI--SISKDEVSRGMGLLTLIVK 358
            E+T +VHG    E+A       F     S+  + M      + + E+     ++ L+V+
Sbjct: 298 EEMTKLVHGEAGLEQAERITKAFFSGDLTSLQPEDMEDAFKGMPQFELDGERNIVDLLVE 357

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           A  + S  +AR  + + AI +N          +  +D        +  GKK + +  
Sbjct: 358 ANISPSKRQAREDVTNGAIYLNGEREQALDKVVTREDTL-GEFTIIRRGKKKYFVIR 413


>gi|300362494|ref|ZP_07058670.1| tyrosine--tRNA ligase [Lactobacillus gasseri JV-V03]
 gi|300353485|gb|EFJ69357.1| tyrosine--tRNA ligase [Lactobacillus gasseri JV-V03]
          Length = 420

 Score =  473 bits (1217), Expect = e-131,   Method: Composition-based stats.
 Identities = 149/423 (35%), Positives = 216/423 (51%), Gaps = 17/423 (4%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQ-GVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           K D L  L  RG I+Q ++   L    ++   +  Y G D T  SLH GHL   M+L   
Sbjct: 3   KFDILEDLKWRGAINQETDEEGLRKYLAEHDDLALYCGTDPTGDSLHIGHLIPFMILKRF 62

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q  G+ P+ L+GGGT  IGDPS R   R +  +++ + N EK+            G  + 
Sbjct: 63  QMAGYHPVILIGGGTGSIGDPSGRKTERVLQTAEQGKHNEEKLTAQMKKLF----GTENF 118

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            + NN  WL  +  ID LR+ G FF VN M++ + V SRL  E  +SF EF+Y ILQA D
Sbjct: 119 EIKNNAEWLGKLNLIDFLRDYGKFFQVNNMINKDVVASRL--ENGISFTEFSYQILQAID 176

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTL 241
           F  L K+   +LQ+GGSDQWGNI  GIDL  +L+      F LT PL+  A GTK GK+ 
Sbjct: 177 FYHLNKDNGVQLQIGGSDQWGNITAGIDLIHKLEGQERPAFGLTIPLMLKADGTKFGKSA 236

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAK 299
            GA+WL+ E TSPY F+Q+W N DD DVV + K  T L   EI+ +A+   KE     A+
Sbjct: 237 GGAVWLDPEKTSPYEFYQFWINQDDRDVVKYLKYFTFLSREEIEDLAEKTEKEPWKRAAQ 296

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRGMGLL 353
           K +A E+T  VHG E  ++A       F  ++ S  +  I        S +       ++
Sbjct: 297 KRLAEEVTKFVHGEEGLKEAQMITEALFSGNVKSLSVSQIEQALKNAPSAEATHEAKNIV 356

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
             +V+     S  +AR  +K+ AI +N    ++    ++         + +  GK+ + +
Sbjct: 357 EFLVETKIEPSKRQAREDVKNGAIYVNGERQNDVDFIVEPDSDFDGKYVIIRKGKRKYTL 416

Query: 414 CHL 416
             +
Sbjct: 417 VKI 419


>gi|227509207|ref|ZP_03939256.1| tyrosine--tRNA ligase [Lactobacillus brevis subsp. gravesensis ATCC
           27305]
 gi|227191353|gb|EEI71420.1| tyrosine--tRNA ligase [Lactobacillus brevis subsp. gravesensis ATCC
           27305]
          Length = 418

 Score =  473 bits (1217), Expect = e-131,   Method: Composition-based stats.
 Identities = 143/425 (33%), Positives = 220/425 (51%), Gaps = 24/425 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + L  L  RG I+Q ++   L  L ++  V  Y+G D T  S+H GHL   M+L   Q  
Sbjct: 2   NILDDLKWRGAINQETDHDGLYDLVNKKSVGLYVGIDPTGDSMHIGHLIPFMILKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P+ L+GGGT  IGDPS +   R +    +++ N E +                  ++
Sbjct: 62  GHHPVILIGGGTGSIGDPSGKKSERVLQTMDQVRHNQEALTRQMEKLFGQD---GSFEIV 118

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  +  +D LR+ G  F++N M+  E + SRL  E  +SF EF Y ILQ  DF+ 
Sbjct: 119 NNYDWLSKMSLLDFLRDYGKLFNINTMIRKEIIASRL--EAGISFTEFTYQILQGVDFLH 176

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKLFALTSPLLTTASGTKMGKTLSGA 244
           L +  D ++Q+GG+DQWGNI  GIDL  +++    + + +T PLL  A GTK GK+  G 
Sbjct: 177 LFRYNDVQVQLGGADQWGNITSGIDLIHKVEGSDAQAYGMTIPLLLKADGTKFGKSEGGN 236

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKII 302
           +WL+ E T+PY F+Q+W N DD DVV + K  T L  +EID + K      E  EA++ +
Sbjct: 237 VWLDPEKTTPYEFYQFWLNQDDRDVVKYLKYFTFLDKTEIDDLEKKVQTHPEKREAQRRL 296

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGL 352
           A E+T  VHG +  E A   +   F   +            ++MPT+++S    S  + +
Sbjct: 297 AQEVTKFVHGPKAVESAERISKALFSGEVADLTTTEIEQGFKNMPTVNVS----SEPLNI 352

Query: 353 LTLIVKA-GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           +  +V A    +S  +AR  + + AI+IN + I +   +I   D      + +  GKK +
Sbjct: 353 VQWLVDATKIESSRRQAREDINNGAIRINGAKIQDTDFEINPSDKFDGKFVIVRRGKKRY 412

Query: 412 IICHL 416
            +  +
Sbjct: 413 FLARV 417


>gi|118464949|ref|YP_882266.1| tyrosyl-tRNA synthetase [Mycobacterium avium 104]
 gi|118166236|gb|ABK67133.1| tyrosyl-tRNA synthetase [Mycobacterium avium 104]
          Length = 421

 Score =  473 bits (1217), Expect = e-131,   Method: Composition-based stats.
 Identities = 147/421 (34%), Positives = 221/421 (52%), Gaps = 15/421 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S  L  L  RG I Q ++   L        +T Y G+D TA SLHAGHL  L+ L   Q+
Sbjct: 3   SGILDELGWRGLIAQSTDLDAL--AAEARPMTVYAGFDPTAPSLHAGHLVPLLALRRFQR 60

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+PI L GG T +IGDP    E R +  +  + E  E+I+G    F+ +    T A++
Sbjct: 61  AGHRPIVLAGGATGMIGDPRDVGE-RTLNEADTVAEWTERIRGQLERFVDFDESATGAVV 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  W   +  I+ LR++G  FSVN ML  ++VR RL+    +S+ EF+YM+LQA D+V
Sbjct: 120 VNNLDWTRQLSAIEFLRDLGKHFSVNVMLDRDTVRRRLE-GDGISYTEFSYMLLQANDYV 178

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT-LSGA 244
           EL + Y C LQ+GGSDQWGNII G+ L  +     + ALT PL+T A GTK GK+   G+
Sbjct: 179 ELHRRYGCVLQIGGSDQWGNIIAGVRLVRQKLGATVHALTVPLVTAADGTKFGKSTGGGS 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKII 302
           +WL+  +T+PY ++QY+ N  DADV+ + +  T L   E+  + +   +      A++ +
Sbjct: 239 LWLDPALTTPYAWYQYFFNTADADVIRYLRWFTFLSADELGELERATAERPQQRAAQRRL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQ--------HMPTISISKDEVSRGMGLLT 354
           A E+T +VHG    E    A+   F      +         +   S+++ +     G++ 
Sbjct: 299 ARELTVLVHGEAATEAVEHASRALFGQGELERLDAATLAAALRETSVAELKPGAPDGIVD 358

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           L+V +G + S   ARR L    + +NN  I  E    +  DF     + L  GK+     
Sbjct: 359 LLVASGLSESRKAARRTLGEGGVSVNNVRIDREDWAPQPSDFLHGKWLVLRRGKRTIAGV 418

Query: 415 H 415
            
Sbjct: 419 E 419


>gi|254775534|ref|ZP_05217050.1| tyrosyl-tRNA synthetase [Mycobacterium avium subsp. avium ATCC
           25291]
          Length = 421

 Score =  473 bits (1217), Expect = e-131,   Method: Composition-based stats.
 Identities = 147/421 (34%), Positives = 221/421 (52%), Gaps = 15/421 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S  L  L  RG I Q ++   L        +T Y G+D TA SLHAGHL  L+ L   Q+
Sbjct: 3   SGILDELGWRGLIAQSTDLDAL--AAEARPMTVYAGFDPTAPSLHAGHLVPLLALRRFQR 60

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+PI L GG T +IGDP    E R +  +  + E  E+I+G    F+ +    T A++
Sbjct: 61  AGHRPIVLAGGATGMIGDPRDVGE-RTLNEADTVAEWTERIRGQLERFVDFDESATGAVV 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  W   +  I+ LR++G  FSVN ML  ++VR RL+    +S+ EF+YM+LQA D+V
Sbjct: 120 VNNLDWTRRLSAIEFLRDLGKHFSVNVMLDRDTVRRRLE-GDGISYTEFSYMLLQANDYV 178

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT-LSGA 244
           EL + Y C LQ+GGSDQWGNII G+ L  +     + ALT PL+T A GTK GK+   G+
Sbjct: 179 ELHRRYGCVLQIGGSDQWGNIIAGVRLVRQKLGATVHALTVPLVTAADGTKFGKSTGGGS 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKII 302
           +WL+  +T+PY ++QY+ N  DADV+ + +  T L   E+  + +   +      A++ +
Sbjct: 239 LWLDPALTTPYAWYQYFFNTADADVIRYLRWFTFLSADELGELERATAERPQQRAAQRRL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQ--------HMPTISISKDEVSRGMGLLT 354
           A E+T +VHG    E    A+   F      +         +   S+++ +     G++ 
Sbjct: 299 ARELTVLVHGEAATEAVEHASRALFGQGELERLDAATLAAALRETSVAELKPGAPDGIVD 358

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           L+V +G + S   ARR L    + +NN  I  E    +  DF     + L  GK+     
Sbjct: 359 LLVASGLSESRKAARRTLGEGGVSVNNVRIDREDWAPQPSDFLHGKWLVLRRGKRTIAGV 418

Query: 415 H 415
            
Sbjct: 419 E 419


>gi|116334768|ref|YP_796295.1| tyrosyl-tRNA synthetase [Lactobacillus brevis ATCC 367]
 gi|75381580|sp|Q7B9Y9|SYY_LACBR RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|34978541|gb|AAQ83557.1| tyrosyl-tRNA synthetase [Lactobacillus brevis]
 gi|116100115|gb|ABJ65264.1| tyrosyl-tRNA synthetase [Lactobacillus brevis ATCC 367]
          Length = 418

 Score =  473 bits (1217), Expect = e-131,   Method: Composition-based stats.
 Identities = 141/420 (33%), Positives = 221/420 (52%), Gaps = 15/420 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L+ RG I+Q ++   L  L S+  ++ Y G D T  S+H GHL   M++   +  
Sbjct: 2   NIIDELTWRGAINQQTDAEGLKKLTSEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFELA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P  L+GG T  IGDPS R   R++    ++Q N++ +            G ++  M+
Sbjct: 62  GHHPYILIGGATGSIGDPSGRKTERQLQTMDKVQHNVKALSRQMQRLF---GGDSNVTMV 118

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  I  +D LR+ G   ++N ML+ + V SRL  +  +SF EF Y ILQ+ DF+ 
Sbjct: 119 NNYDWLSKISLLDFLRDYGKLVNINTMLAKDIVASRL--DTGISFTEFTYQILQSVDFLT 176

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKLFALTSPLLTTASGTKMGKTLSGA 244
           L  +++ +LQ+GG+DQWGNI  GIDL  ++K     ++ LT PL+  A GTK GKT  GA
Sbjct: 177 LHNDHNIQLQIGGADQWGNITAGIDLIHKIKGADEAVYGLTIPLMLKADGTKFGKTAGGA 236

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKII 302
           IWL+ + TSPY F+Q+W N DD DV+ + K  T L   EI+++A       E   A++ +
Sbjct: 237 IWLDADKTSPYEFYQFWLNQDDRDVIRYLKFFTFLGQDEINQLAAAVEDEPEKRLAQRRL 296

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV------SRGMGLLTLI 356
           A E+T  VHG E  E A   +   F   I    +  +  + ++V      S    ++ L+
Sbjct: 297 AEEVTRFVHGEEALESAQHISEILFSGDIQRLTLTEVQEAFEKVPNVSINSEPTNIVELL 356

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            +     S  +AR  + + AI IN    ++   Q+  +   S   + +  GKKN+ +  +
Sbjct: 357 TETAIEPSRRQAREDITNGAITINGERCTDTDAQLNPKTNFSGKFMVIRRGKKNYFLAKV 416


>gi|158520626|ref|YP_001528496.1| tyrosyl-tRNA synthetase [Desulfococcus oleovorans Hxd3]
 gi|254783594|sp|A8ZUK6|SYY_DESOH RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|158509452|gb|ABW66419.1| tyrosyl-tRNA synthetase [Desulfococcus oleovorans Hxd3]
          Length = 433

 Score =  473 bits (1217), Expect = e-131,   Method: Composition-based stats.
 Identities = 181/431 (41%), Positives = 261/431 (60%), Gaps = 26/431 (6%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            + ILSERGF+   ++ +EL  L ++  VT YIG+D TASSLH G L  +M L  +Q+ G
Sbjct: 3   VVDILSERGFVEAFTHEQELRDLAAESAVTCYIGFDPTASSLHVGSLVPIMALAHMQRNG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+PI+L+GGGT ++GDPS + E R+++  + ++ NIE I+   S FI +  GK  AL++N
Sbjct: 63  HRPIALVGGGTGLVGDPSGKTEMRQLITPETVEANIEGIQRQLSRFIDFDGGK--ALLVN 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  ++YI  LR+IG  FSVNRM+  ES R RL+ E+ LSF+EFNYM+LQAYDF++L
Sbjct: 121 NADWLTGLEYIPFLRDIGRHFSVNRMIKAESYRMRLESEEGLSFIEFNYMLLQAYDFLKL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
             + DC LQMGGSDQWGNI+ GIDL  R+   +++ LT PL+TT+SG KMGKT +GA+WL
Sbjct: 181 CGDRDCVLQMGGSDQWGNIVAGIDLVRRVLNRQVYGLTFPLITTSSGAKMGKTAAGAVWL 240

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           + E TSPY+++QYW N DD DV  F    T LPM EI  + ++ G ++N AK ++A E T
Sbjct: 241 DAERTSPYDYYQYWINTDDQDVARFLSLFTFLPMPEIQEVKRISGADLNSAKAVLAFEAT 300

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHM---------------------PTISISKDEV 346
            + HG + A +A + A   F      Q +                     P   ++  E+
Sbjct: 301 RIAHGTDAAVQAHSDAAVNFGRRDIPQDLLPSSTIPRDAEGTGAAVSGTAPQTEMTMAEL 360

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
           S G+    L    G A S  +ARR ++     +N+  I +++ ++  +D D    I L  
Sbjct: 361 SEGIPAFVLFHTVGLADSKGQARRLIQQGGGYVNDRRIESDEYRVSAEDLDDAK-IVLRA 419

Query: 407 GKKNH--IICH 415
           GKK +  I+  
Sbjct: 420 GKKRYHTIVVR 430


>gi|41407494|ref|NP_960330.1| tyrosyl-tRNA synthetase [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|81414375|sp|Q740F5|SYY_MYCPA RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|41395847|gb|AAS03713.1| TyrS [Mycobacterium avium subsp. paratuberculosis K-10]
          Length = 421

 Score =  473 bits (1217), Expect = e-131,   Method: Composition-based stats.
 Identities = 147/421 (34%), Positives = 221/421 (52%), Gaps = 15/421 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S  L  L  RG I Q ++   L        +T Y G+D TA SLHAGHL  L+ L   Q+
Sbjct: 3   SGILDELGWRGLIAQSTDLDAL--AAEARPMTVYAGFDPTAPSLHAGHLVPLLALRRFQR 60

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+PI L GG T +IGDP    E R +  +  + E  E+I+G    F+ +    T A++
Sbjct: 61  AGHRPIVLAGGATGMIGDPRDVGE-RTLNEADTVAEWTERIRGQLERFVDFDESDTGAVV 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  W   +  I+ LR++G  FSVN ML  ++VR RL+    +S+ EF+YM+LQA D+V
Sbjct: 120 VNNLDWTRQLSAIEFLRDLGKHFSVNVMLDRDTVRRRLE-GDGISYTEFSYMLLQANDYV 178

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT-LSGA 244
           EL + Y C LQ+GGSDQWGNII G+ L  +     + ALT PL+T A GTK GK+   G+
Sbjct: 179 ELHRRYGCVLQIGGSDQWGNIIAGVRLVRQKLGATVHALTVPLVTAADGTKFGKSTGGGS 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKII 302
           +WL+  +T+PY ++QY+ N  DADV+ + +  T L   E+  + +   +      A++ +
Sbjct: 239 LWLDPALTTPYAWYQYFFNTADADVIRYLRWFTFLSADELGELERATAERPQQRAAQRRL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQ--------HMPTISISKDEVSRGMGLLT 354
           A E+T +VHG    E    A+   F      +         +   S+++ +     G++ 
Sbjct: 299 ARELTVLVHGEAATEAVKHASRALFGQGELERLDAATLAAALRETSVAELKPGAPDGIVD 358

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           L+V +G + S   ARR L    + +NN  I  E    +  DF     + L  GK+     
Sbjct: 359 LLVASGLSESRKAARRTLGEGGVSVNNVRIDREDWAPQPSDFLHGKWLVLRRGKRTIAGV 418

Query: 415 H 415
            
Sbjct: 419 E 419


>gi|165881913|gb|ABY71220.1| tyrosyl-tRNA synthetase [Lactobacillus brevis]
          Length = 418

 Score =  472 bits (1216), Expect = e-131,   Method: Composition-based stats.
 Identities = 141/420 (33%), Positives = 221/420 (52%), Gaps = 15/420 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L+ RG I+Q ++   L  L S+  ++ Y G D T  S+H GHL   M++   +  
Sbjct: 2   NIIDELTWRGAINQQTDAEGLKKLTSEKKISLYCGVDPTGDSMHIGHLIPFMMMKRFELA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P  L+GG T  IGDPS R   R++    ++Q N++ +            G ++  M+
Sbjct: 62  GHHPYILIGGATGSIGDPSGRKTERQLQTMDKVQHNVKALSRQMQRLF---GGDSNVTMV 118

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  I  +D LR+ G   ++N ML+ + V SRL  +  +SF EF Y ILQ+ DF+ 
Sbjct: 119 NNYDWLSRISLLDFLRDYGKLVNINTMLAKDIVASRL--DTGISFTEFTYQILQSVDFLT 176

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKLFALTSPLLTTASGTKMGKTLSGA 244
           L  +++ +LQ+GG+DQWGNI  GIDL  ++K     ++ LT PL+  A GTK GKT  GA
Sbjct: 177 LHNDHNIQLQIGGADQWGNITAGIDLIHKIKGADEAVYGLTIPLMLKADGTKFGKTAGGA 236

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKII 302
           IWL+ + TSPY F+Q+W N DD DV+ + K  T L   EI+++A       E   A++ +
Sbjct: 237 IWLDADKTSPYEFYQFWLNQDDRDVIRYLKFFTFLGQDEINQLAATVEDEPEKRLAQRRL 296

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV------SRGMGLLTLI 356
           A E+T  VHG E  E A   +   F   I    +  +  + ++V      S    ++ L+
Sbjct: 297 AEEVTRFVHGEEALESAQHISEILFSGDIQRLTLTEVQEAFEKVPNVSINSEPTNIVELL 356

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            +     S  +AR  + + AI IN    ++   Q+  +   S   + +  GKKN+ +  +
Sbjct: 357 TETAIEPSRRQAREDITNGAITINGERCTDTDAQLNPKTNFSGKFMVIRRGKKNYFLAKV 416


>gi|285808478|gb|ADC36002.1| putative tyrosyl-tRNA synthetase [uncultured bacterium 259]
          Length = 421

 Score =  472 bits (1216), Expect = e-131,   Method: Composition-based stats.
 Identities = 149/420 (35%), Positives = 238/420 (56%), Gaps = 12/420 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D  S L  RG ++  +    +    + G +T YIG+D TASSLH G L  +M L  LQ+ 
Sbjct: 2   DLYSELEWRGMLYDGT--EGVREALAAGPITGYIGFDPTASSLHVGSLLTIMGLARLQRA 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH PI+++GGGT +IGDPS + + R ++ S++++ N++ I+   + F+ +      A ++
Sbjct: 60  GHSPIAIVGGGTGLIGDPSGKTQERTLLSSEQVEANVQGIRAQLARFLDFDRPGNPARIV 119

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  +  +  LR++G  F+VN M++ +SV+ RL+ E  +SF EF+Y+++Q+YD V 
Sbjct: 120 NNADWLVPMDLMSFLRDVGKHFTVNYMIAKDSVKRRLESEDGISFTEFSYLLMQSYDVVM 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L   Y C LQMGGSDQWGNI  GIDL  +L+  K   L  PL+TT++G K GKT +G +W
Sbjct: 180 LFDRYQCTLQMGGSDQWGNITAGIDLLRKLRGAKGHGLVWPLMTTSAGVKFGKTEAGTVW 239

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIAT 304
           L+  +TSP+ F+Q+W N DD D + + K  T L    ID +A    +     EA++ +A 
Sbjct: 240 LDAALTSPFRFYQFWLNTDDRDAIRYLKLFTFLDRDAIDALAAAVAQHPERREAQRALAR 299

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV--------SRGMGLLTLI 356
            +TT VHG +  ++A  AA   F  +I   ++  + +  ++         + GM L  ++
Sbjct: 300 AVTTAVHGDDHVQRAERAAEVLFAENIADANVDDVLMVFEDAPSSDLFLPAEGMPLAEML 359

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
                  S +EA R LKS  + +NN   ++E+ ++   D        L  G+K+H I  +
Sbjct: 360 ATVKLVPSKSEAMRLLKSGGVYVNNVRATDERARLTAADAIGGALFVLRKGRKDHHIVRV 419


>gi|301059196|ref|ZP_07200134.1| tyrosine--tRNA ligase [delta proteobacterium NaphS2]
 gi|300446686|gb|EFK10513.1| tyrosine--tRNA ligase [delta proteobacterium NaphS2]
          Length = 413

 Score =  472 bits (1216), Expect = e-131,   Method: Composition-based stats.
 Identities = 182/410 (44%), Positives = 248/410 (60%), Gaps = 8/410 (1%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + L +   RGF  Q ++   L  + +Q   T YIG+D TA SLH G L  +M L  +Q  
Sbjct: 3   NILEVFEARGFFEQSTDEVSLSQMLTQ-PTTCYIGFDPTAKSLHVGSLLPIMSLVHMQNA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+P+ L+GGGT+++GDPS + E RR+M  +EI EN   +K   S+FI +   +  A+M+
Sbjct: 62  GHRPVVLVGGGTALVGDPSGKTEMRRIMSREEINENAMGLKRQLSNFIDFNNDR--AVMV 119

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  + Y+D LR+IG  FSVNRML+ ES + R+  E  LSF+EFNYM+LQAYDF  
Sbjct: 120 NNADWLAELNYVDFLRDIGRHFSVNRMLAAESYKMRM--ETGLSFIEFNYMLLQAYDFWH 177

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L K YDCRLQMGG+DQWGNI+ G DL  RL+   +  LT PLLTTASG KMGKT  GA+W
Sbjct: 178 LFKYYDCRLQMGGNDQWGNILAGADLIRRLEGEVVHGLTFPLLTTASGIKMGKTHKGAVW 237

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           L+ EMTSPY+++QYW N DD D+  F    T L M EI+R+ KL+G EI +AKKI+A E 
Sbjct: 238 LDAEMTSPYDYYQYWVNQDDGDIGRFLALFTLLDMDEINRLNKLKGSEIRDAKKILAYEA 297

Query: 307 TTMVHGREEAEKAATAAMECF--DMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           T + HG+E A++A  AA   F        +  P+  I ++ +  G+    L   AG   +
Sbjct: 298 TRLCHGKENADQARAAAEGLFGGSKGGSDKSAPSYEIGRETLEDGIPAYILFENAGLCKT 357

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
             EARR +      +N+  IS     + + D    G +    GKK ++  
Sbjct: 358 RGEARRLISQGGGYLNDRKISVFDQAVGIDDLLEGGLLL-RAGKKRYMKI 406


>gi|313159189|gb|EFR58562.1| tyrosine--tRNA ligase [Alistipes sp. HGB5]
          Length = 432

 Score =  472 bits (1216), Expect = e-131,   Method: Composition-based stats.
 Identities = 136/430 (31%), Positives = 225/430 (52%), Gaps = 25/430 (5%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
            +F+  L  RG IH I           + + TAY+G D TA SLH GHL  +M+L   Q 
Sbjct: 4   KNFIEELEWRGMIHTIMP--GAKEQLEKEMTTAYLGIDPTADSLHIGHLVGVMILKHFQM 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG-TGKTDAL 124
            GH+P++L+GG T +IGDPS + + R ++    ++ N E IK   +  + +       A+
Sbjct: 62  CGHRPLALIGGATGMIGDPSGKSQERNLLDEPTLRHNQEAIKRQLAKLLDFESDAPNAAV 121

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK-REQSLSFLEFNYMILQAYD 183
           ++NN  W+  I +++ +R+IG   +VN M++ +SV+ R       +SF EF Y ++Q +D
Sbjct: 122 LVNNYDWMKDISFLEFIRDIGKCITVNYMMAKDSVKKRFSGEGDGMSFTEFTYQLVQGFD 181

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKLFALTSPLLTTASGTKMGKTL 241
           F+ L +  +C++Q+GG+DQWGNI  G +L  R      + FA+T PL+T A GTK GKT 
Sbjct: 182 FLHLYQTMNCKVQLGGADQWGNITTGTELIRRKLGSEAEAFAITCPLITKADGTKFGKTE 241

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAK 299
           SG +WL+   TSPY F+Q+W N+ D D   + +  T L    ++ +         +   +
Sbjct: 242 SGNVWLDPRYTSPYKFYQFWLNVSDEDAKRYIRIFTLLDRETVEALTAEHEAAPHLRILQ 301

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDE 345
           K +A EITTM+H +EE EKA  A+   F  S                 + +P   I++ E
Sbjct: 302 KRLAQEITTMIHSKEEYEKAVEASAILFGGSTSEALRKLDEETLLQVFEGVPQFRIARAE 361

Query: 346 VSRGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           +  G+  + L  + A    S  E R+ ++   + +N   +++   ++   D  +   + +
Sbjct: 362 L--GLPFVDLCAEKAQVFPSKGECRKMVQGGGVSLNKEKVADAAREVTEADLIAGKYLLV 419

Query: 405 SFGKKNHIIC 414
             GKKN+ + 
Sbjct: 420 QKGKKNYFLL 429


>gi|150009644|ref|YP_001304387.1| putative tyrosyl-tRNA synthetase 1 [Parabacteroides distasonis ATCC
           8503]
 gi|255013075|ref|ZP_05285201.1| putative tyrosyl-tRNA synthetase 1 [Bacteroides sp. 2_1_7]
 gi|256838682|ref|ZP_05544192.1| tyrosyl-tRNA synthetase [Parabacteroides sp. D13]
 gi|298374041|ref|ZP_06983999.1| tyrosine--tRNA ligase [Bacteroides sp. 3_1_19]
 gi|189083665|sp|A6LGF1|SYY_PARD8 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|149938068|gb|ABR44765.1| putative tyrosyl-tRNA synthetase 1 [Parabacteroides distasonis ATCC
           8503]
 gi|256739601|gb|EEU52925.1| tyrosyl-tRNA synthetase [Parabacteroides sp. D13]
 gi|298268409|gb|EFI10064.1| tyrosine--tRNA ligase [Bacteroides sp. 3_1_19]
          Length = 430

 Score =  472 bits (1216), Expect = e-131,   Method: Composition-based stats.
 Identities = 144/428 (33%), Positives = 223/428 (52%), Gaps = 22/428 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG I  +    E      + + +AY+G D TA SLH GHL  +M+L   Q+ 
Sbjct: 2   NFVEELRWRGMIADMMPGTE--EQLQKELTSAYVGIDPTADSLHIGHLVSVMMLKHFQRA 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG-TGKTDALM 125
           GH+PI+L+GG T +IGDPS +   R ++    ++ N + IK   + F+ +       A +
Sbjct: 60  GHRPIALVGGATGMIGDPSMKSAERNLLDEATLRHNQDCIKKQLAKFLDFDSDAPNAAKL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ--SLSFLEFNYMILQAYD 183
           +NN  W+    +++ +R+IG   +VN M++ +SV+ RL RE    +SF EF+Y +LQ YD
Sbjct: 120 VNNYDWMKGYSFLNFIRDIGKHITVNYMMAKDSVKKRLSRESSVGMSFTEFSYQLLQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           ++ L ++  CRLQMGG+DQWGNI  G +L  R    + +ALT PL+T A G K GKT SG
Sbjct: 180 YLYLYEHEGCRLQMGGTDQWGNITTGTELIRRTLGGEAYALTCPLITKADGGKFGKTESG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPM--SEIDRMAKLQGKEINEAKKI 301
            IWL++  TSPY F+Q+W N+ DAD   + K  T L           +     +   +K 
Sbjct: 240 NIWLDRRYTSPYKFYQFWLNVSDADAAKYIKIFTDLSQEEIAALEAEQEAAPHLRPLQKR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDEVS 347
           +A E+T MVH  E+ E A  A+   F  S H               + +P   IS+DE++
Sbjct: 300 LAKEVTVMVHSLEDYEAAVEASNILFGNSTHEALLKLDEDTLLAVFEGVPHFDISRDELA 359

Query: 348 RGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+  + L  + A    S  E R+ ++S  +  N   ++     I          + +  
Sbjct: 360 AGIKAVDLCTEKAAIFPSKGEMRKLVQSGGVSFNKEKLAEVDTVIDCSSLLDDKYLLVQR 419

Query: 407 GKKNHIIC 414
           GKKN+ + 
Sbjct: 420 GKKNYYLL 427


>gi|38233766|ref|NP_939533.1| tyrosyl-tRNA synthetase [Corynebacterium diphtheriae NCTC 13129]
 gi|81401476|sp|Q6NHG2|SYY_CORDI RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|38200027|emb|CAE49696.1| tyrosyl-tRNA synthetase [Corynebacterium diphtheriae]
          Length = 420

 Score =  472 bits (1216), Expect = e-131,   Method: Composition-based stats.
 Identities = 150/420 (35%), Positives = 224/420 (53%), Gaps = 15/420 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG I+Q ++   L   C +  +T Y G+D T  SLHAGHL  +++L   Q+ 
Sbjct: 2   NIIDELQWRGLINQSTDIDALREAC-EKPITLYCGFDPTGDSLHAGHLVPMIMLRRFQEA 60

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI+L GG T  IGDP    E R M+    I+ N+E IK    SF+++  G + A+M+
Sbjct: 61  GHRPITLAGGATGFIGDPRDVGE-RSMLSQDTIEHNLESIKKQLRSFVRF-DGDSPAIMV 118

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W  S+  +D LR++G  FS+N ML  E+V+ RL+ +  +S+ EF+YM+LQA DFV+
Sbjct: 119 NNADWTMSMSVVDFLRDVGKNFSLNTMLDRETVKRRLETD-GISYTEFSYMLLQANDFVQ 177

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA-I 245
           L + YDC LQ+GG DQWGNI+ G+DL  R+   K  ALT PL+T A G K GK+  G  +
Sbjct: 178 LNREYDCVLQIGGGDQWGNIVSGVDLNRRVSGTKTHALTVPLVTDAQGQKFGKSTGGGKL 237

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIA 303
           WL+ E TS Y+++QY+ N  D+ V+ + +  T L   EI  +     +   +  A++ +A
Sbjct: 238 WLDPEKTSAYSWYQYFLNAGDSVVIDYLRWFTFLTQEEIAELETEVRERPHLRAAQRRLA 297

Query: 304 TEITTMVHGREEAEKAATAAMECF--------DMSIHSQHMPTISISKDEVSRGMGLLTL 355
            E+T +VHG +       AA   F        D +     +    I +        ++ L
Sbjct: 298 QEMTDLVHGHDATVSVELAAQALFGRASLQDLDEATLDGALSETVIFEVPAGESPTIIDL 357

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           ++ AG   S   ARR +K     +NN  I +E  Q           + L  GKKN     
Sbjct: 358 LIGAGLVDSKGAARRTIKEGGAYVNNERIESEDWQPTDDVLLHGAWLVLRKGKKNFAGVK 417


>gi|313122996|ref|YP_004033255.1| tyrosyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ND02]
 gi|312279559|gb|ADQ60278.1| Tyrosyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ND02]
          Length = 421

 Score =  472 bits (1216), Expect = e-131,   Method: Composition-based stats.
 Identities = 147/423 (34%), Positives = 216/423 (51%), Gaps = 17/423 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQ-GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           D L  L  RG I+Q ++   L    ++   +  Y G D T  SLH GHL   M+L   Q 
Sbjct: 5   DILEDLKWRGAINQETDEEGLRDYLAKHDDLALYCGTDPTGDSLHIGHLIPFMILKRFQL 64

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            G+KP+ ++GGGT  IGDPS R   R +   + I+ N E +            G  +  +
Sbjct: 65  AGYKPVIVIGGGTGSIGDPSGRSTERVLQSEETIKHNEEALTAQMVKLF----GTENFRI 120

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  WL  +  ++ LR+ G  F VN ML+ E V SRL+    +SF EF+Y ILQA DF 
Sbjct: 121 VNNRDWLGKMTLLEFLRDYGKLFQVNNMLNKEVVASRLES--GISFTEFSYQILQAIDFY 178

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSG 243
            L +++  ++Q+GG+DQWGNI  GIDL  RL+      F LT PL+  A GTK GK+  G
Sbjct: 179 ILNRDHGVQMQIGGADQWGNITAGIDLIHRLEGADRPAFGLTIPLMLKADGTKFGKSAGG 238

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKI 301
           A+WL+ E TSPY F+Q+W N DD DV+ + K  T L   EID + +    E    EA+K 
Sbjct: 239 AVWLDPEKTSPYEFYQFWINQDDRDVIKYLKYFTFLNHEEIDALEEKVKTEPWKREAQKR 298

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISI------SKDEVSRGMGLLTL 355
           +A E+T  VHG E  ++A T     F  ++       + I      S +  +    L+  
Sbjct: 299 LAEEVTKFVHGEEGLKEAQTVTEALFSGNVKDLTTKQVEIALAKAPSAESGAEKKNLVDF 358

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +V     +S  +AR  + + AI +N   I +   ++          + +  GKK + + H
Sbjct: 359 LVDTKIESSKRQAREDVNNGAIYVNGDRIQDTDFEVDPAAAFDGKFVIIRKGKKKYTLVH 418

Query: 416 LCG 418
           + G
Sbjct: 419 IKG 421


>gi|224013912|ref|XP_002296620.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220968972|gb|EED87316.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 418

 Score =  472 bits (1216), Expect = e-131,   Method: Composition-based stats.
 Identities = 185/417 (44%), Positives = 268/417 (64%), Gaps = 12/417 (2%)

Query: 12  LSERGFIHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +RGF+ Q +N  ELD L ++       V+AY+G+D TA SLH G L Q+M+L  LQ++
Sbjct: 1   MRDRGFLFQCTNLSELDALLTEATSKNEAVSAYLGFDATADSLHVGSLLQIMILRHLQQS 60

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK-TDALM 125
           GH+PI L+GGGTS +GDP+ +DESR M+    I++N + I  +F  F+ +G     +A+M
Sbjct: 61  GHRPIVLIGGGTSKVGDPTGKDESRIMLNDDIIKKNTDGISQVFQKFLTFGEKSVEEAIM 120

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN+ WL  +KY+  LR+ G+ F++NRM+SFESV+ RL RE   SFLEFNYMILQAYDF+
Sbjct: 121 VNNDEWLSDLKYLQFLRDYGTHFTINRMMSFESVKQRLAREAPFSFLEFNYMILQAYDFL 180

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           EL + Y+ +LQ+GGSDQWGN+I G +LG R+   +L+ALT+PL+TT+ G KMGKT  GA+
Sbjct: 181 ELNRRYNAQLQLGGSDQWGNMISGCELGRRVDGKQLYALTAPLITTSDGKKMGKTAGGAV 240

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
           WLN +  S Y++WQ+WRN  D DV+ F K  T L + EI++MA+ QG +IN+AK ++A E
Sbjct: 241 WLNADKLSEYDYWQFWRNTSDEDVIRFLKLFTELSLEEIEKMAEWQGADINKAKVVLADE 300

Query: 306 ITTMVHGREEAEKAATAAMECFDMS----IHSQHMPTISISKDEVS--RGMGLLTLIVKA 359
            T ++HGRE            F         ++ +  I +S+DE++   G+ ++ L VK 
Sbjct: 301 ATALLHGRECLAAIHDTIDTMFKGGKSAEASTEGLARIFVSEDELNAKDGVKVIDLFVKL 360

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           G A+S  EARR ++    K+    I +E   I   DFD    + L  GKK   +  L
Sbjct: 361 GLASSKKEARRLVQGGGAKLGEEKIEDEFAVIAKDDFDEKNELTLRAGKKRAGVVEL 417


>gi|296164588|ref|ZP_06847156.1| tyrosine--tRNA ligase [Mycobacterium parascrofulaceum ATCC BAA-614]
 gi|295900068|gb|EFG79506.1| tyrosine--tRNA ligase [Mycobacterium parascrofulaceum ATCC BAA-614]
          Length = 426

 Score =  472 bits (1216), Expect = e-131,   Method: Composition-based stats.
 Identities = 151/418 (36%), Positives = 228/418 (54%), Gaps = 16/418 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S  L  L  RG I Q ++   L     +G +T Y G+D TA+SLHAGHL  L+ L   Q+
Sbjct: 3   SGILDELGWRGLIAQSTDLGALAAEAQRGPMTVYAGFDPTAASLHAGHLVPLLALRRFQR 62

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY---GTGKTD 122
            GH+PI L GG T +IGDP    E R +  +  + E  E+I+G    F+ +   G   T 
Sbjct: 63  AGHRPIVLAGGATGMIGDPRDVGE-RTLNEADTVAEWTERIRGQLERFVDFSDSGESATG 121

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
           A+++NN  W   +  I+ LR++G  FSVN ML  ++VR RL+  + +S+ EF+YM+LQA 
Sbjct: 122 AVVVNNLDWTAPLSAIEFLRDLGKHFSVNVMLDRDTVRRRLE-GEGISYTEFSYMLLQAN 180

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT-L 241
           D+VEL + Y C LQ+GGSDQWGNII G+ L  +     + ALT PL+T A GTK GK+  
Sbjct: 181 DYVELHRRYGCALQIGGSDQWGNIIAGVRLVRQKLGATVHALTVPLVTAADGTKFGKSTG 240

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAK 299
            G++WL+  MT+PY ++QY+ N  DADV+ + +  T L   E+  + +   +      A+
Sbjct: 241 GGSLWLDPAMTTPYAWYQYFFNTADADVIRYLRWFTFLTADELGELEQATAERPQQRAAQ 300

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSI--------HSQHMPTISISKDEVSRGMG 351
           + +A E+T +VHG    E    A+   F             +  +   S+++ +     G
Sbjct: 301 RRLARELTVLVHGEAATEAVEHASRALFGQGELDRLDEATLAAALREASVAELKPGGADG 360

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
           ++ L+V +G + S   ARR L    + +NN  I NE+   +  DF     + L  GK+
Sbjct: 361 IVDLLVSSGLSESRKAARRTLNEGGVSVNNVRIDNEEWAPRPSDFLHGRWLVLRRGKR 418


>gi|84496716|ref|ZP_00995570.1| tyrosyl-tRNA synthetase [Janibacter sp. HTCC2649]
 gi|84383484|gb|EAP99365.1| tyrosyl-tRNA synthetase [Janibacter sp. HTCC2649]
          Length = 419

 Score =  472 bits (1215), Expect = e-131,   Method: Composition-based stats.
 Identities = 139/412 (33%), Positives = 219/412 (53%), Gaps = 10/412 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +D L+ L  RG + Q ++   L    + G +TAY G+D TA SLH G+L QL+++  LQ+
Sbjct: 2   NDILAELQWRGLVSQTTDEGALRDALTSGPITAYCGFDPTAPSLHFGNLVQLIVMRHLQR 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHK I L+GG T +IGDP      R +   ++  E +  I+     F+ +  G   A+M
Sbjct: 62  AGHKVICLVGGSTGLIGDPRP-SAERVLKTKEQTAEWVAGIQQQVQPFLDF-EGDNAAIM 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  W   +  +D LR+IG  F VN+M+  ++V +RL  ++ +S+ EF+Y ILQ  DF+
Sbjct: 120 VNNLDWTAPLSALDFLRDIGKHFRVNQMVKKDAVAARLNSDEGISYTEFSYQILQGLDFL 179

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           EL + + C LQ GG DQWGN+  G DL  +++   +  LT+PL+T ++G K GK+   A+
Sbjct: 180 ELYRAHGCTLQTGGQDQWGNLTAGSDLIHKVEGDSVHLLTTPLVTDSAGNKFGKSEGNAV 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIA 303
           WL+ EMTSPY F+QYW N++DA V+   +  T     EI  + +   +E     A++ +A
Sbjct: 240 WLSSEMTSPYAFYQYWLNVEDASVIKLVRIFTDRNQDEIAELERQVSEEPFRRAAQRALA 299

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQ------HMPTISISKDEVSRGMGLLTLIV 357
            ++TT+VHG         A+   F     +          T  +   EVS GM +   +V
Sbjct: 300 ADVTTLVHGAGATASVQAASEALFGKGDLAALDLRTLQDATAELPGGEVSSGMTMTDALV 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
             G   S N ARR +      +N   +++ +  +  + F       L  G+K
Sbjct: 360 AVGLVDSRNAARRAIGDGGASVNGEKVTDPEFTLADEHFLHGTVAILRRGRK 411


>gi|300813166|ref|ZP_07093541.1| tyrosine--tRNA ligase [Lactobacillus delbrueckii subsp. bulgaricus
           PB2003/044-T3-4]
 gi|300495850|gb|EFK30997.1| tyrosine--tRNA ligase [Lactobacillus delbrueckii subsp. bulgaricus
           PB2003/044-T3-4]
 gi|325684851|gb|EGD26998.1| tyrosine--tRNA ligase [Lactobacillus delbrueckii subsp. lactis DSM
           20072]
          Length = 421

 Score =  472 bits (1215), Expect = e-131,   Method: Composition-based stats.
 Identities = 148/423 (34%), Positives = 216/423 (51%), Gaps = 17/423 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQ-GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           D L  L  RG I+Q ++   L    ++   +  Y G D T  SLH GHL   M+L   Q 
Sbjct: 5   DILEDLKWRGAINQETDEEGLRDYLAKHDDLALYCGTDPTGDSLHIGHLIPFMILKRFQL 64

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            G+KP+ ++GGGT  IGDPS R   R +   + I+ N E +            G  +  +
Sbjct: 65  AGYKPVIVIGGGTGSIGDPSGRSTERVLQSEETIKHNEEALTAQMVKLF----GTENFRI 120

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  WL  +  ++ LR+ G  F VN ML+ E V SRL  E  +SF EF+Y ILQA DF 
Sbjct: 121 VNNRDWLGKMTLLEFLRDYGKLFQVNNMLNKEVVASRL--ENGISFTEFSYQILQAIDFY 178

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSG 243
            L +++  ++Q+GG+DQWGNI  GIDL  RL+      F LT PL+  A GTK GK+  G
Sbjct: 179 ILNRDHGVQMQIGGADQWGNITAGIDLIHRLEGADRPAFGLTIPLMLKADGTKFGKSAGG 238

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKI 301
           A+WL+ E TSPY F+Q+W N DD DV+ + K  T L   EID + +    E    EA+K 
Sbjct: 239 AVWLDPEKTSPYEFYQFWINQDDRDVIKYLKYFTFLNHEEIDALEEKVKTEPWKREAQKR 298

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISI------SKDEVSRGMGLLTL 355
           +A E+T  VHG E  ++A T     F  ++       + I      S +  +    L+  
Sbjct: 299 LAEEVTKFVHGEEGLKEAQTVTEALFSGNVKDLTTKQVEIALAKAPSAESGAEKKNLVDF 358

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +V     +S  +AR  + + AI +N   I +   ++          + +  GKK + + H
Sbjct: 359 LVDTKIESSKRQAREDVNNGAIYVNGDRIQDTDFEVDPAAAFDGKFVIIRKGKKKYTLVH 418

Query: 416 LCG 418
           + G
Sbjct: 419 IKG 421


>gi|227512091|ref|ZP_03942140.1| tyrosine--tRNA ligase [Lactobacillus buchneri ATCC 11577]
 gi|227525078|ref|ZP_03955127.1| tyrosine--tRNA ligase [Lactobacillus hilgardii ATCC 8290]
 gi|227084743|gb|EEI20055.1| tyrosine--tRNA ligase [Lactobacillus buchneri ATCC 11577]
 gi|227087790|gb|EEI23102.1| tyrosine--tRNA ligase [Lactobacillus hilgardii ATCC 8290]
          Length = 418

 Score =  472 bits (1215), Expect = e-131,   Method: Composition-based stats.
 Identities = 143/425 (33%), Positives = 219/425 (51%), Gaps = 24/425 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + L  L  RG I+Q ++   L  L ++  V  Y+G D T  S+H GHL   M+L   Q  
Sbjct: 2   NILDDLKWRGAINQETDHDGLYDLVNKKSVGLYVGIDPTGDSMHIGHLIPFMILKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P+ L+GGGT  IGDPS +   R +    ++  N E +                  ++
Sbjct: 62  GHHPVILIGGGTGSIGDPSGKKSERVLQTMDQVHHNQEALTHQMEKLFGQD---GSFEIV 118

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  +  +D LR+ G  F++N M+  E + SRL  E  +SF EF Y ILQ  DF+ 
Sbjct: 119 NNYDWLSKMSLLDFLRDYGKLFNINTMIRKEIIASRL--EAGISFTEFTYQILQGVDFLH 176

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKLFALTSPLLTTASGTKMGKTLSGA 244
           L +  D ++Q+GG+DQWGNI  GIDL  +++    + + +T PLL  A GTK GK+  G 
Sbjct: 177 LFRYNDVQVQLGGADQWGNITSGIDLIHKVEGSDAQAYGMTIPLLLKADGTKFGKSEGGN 236

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKII 302
           +WL+ E T+PY F+Q+W N DD DVV + K  T L  +EID + K      E  EA++ +
Sbjct: 237 VWLDPEKTTPYEFYQFWLNQDDRDVVKYLKYFTFLDKTEIDDLEKKVQTHPEKREAQRRL 296

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGL 352
           A E+T  VHG +  E A   +   F   +            ++MPT+++S    S  + +
Sbjct: 297 AQEVTKFVHGPKAVESAERISKALFSGEVADLTTTEIEQGFKNMPTVNVS----SEPLNI 352

Query: 353 LTLIVKA-GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           +  +V A    +S  +AR  + + AI+IN + I +   +I   D      + +  GKK +
Sbjct: 353 VQWLVDATKIESSRRQAREDINNGAIRINGAKIQDTDFEINPSDKFDGKFVIVRRGKKRY 412

Query: 412 IICHL 416
            +  +
Sbjct: 413 FLARV 417


>gi|323339390|ref|ZP_08079674.1| tyrosine--tRNA ligase [Lactobacillus ruminis ATCC 25644]
 gi|323093191|gb|EFZ35779.1| tyrosine--tRNA ligase [Lactobacillus ruminis ATCC 25644]
          Length = 418

 Score =  472 bits (1215), Expect = e-131,   Method: Composition-based stats.
 Identities = 150/425 (35%), Positives = 220/425 (51%), Gaps = 24/425 (5%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           ++ +  L  RG ++Q+S+   L  L  +  V  Y G D T  SLH GHL   M+L   Q 
Sbjct: 2   TNIIDELKWRGAVNQVSDEENLSKLLDEKSVGVYCGTDPTGDSLHVGHLIPFMMLKRFQL 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+   L+GGGT  IGDPS R   R +   +++  N E +            G+ +  +
Sbjct: 62  AGHRAFILIGGGTGSIGDPSGRSTERTLQTMEQVHHNEEALTSQMKKLF----GEDNITI 117

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  WL  I  +D LR+ G  F++N ML+ E V SRL  E  +SF EF Y ILQA DF 
Sbjct: 118 VNNHDWLSKISLLDFLRDYGKLFNINTMLNKEVVASRL--EVGISFTEFTYQILQAVDFH 175

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKLFALTSPLLTTASGTKMGKTLSG 243
            L    D +LQ+GG+DQWGNI  GIDL  +++    + FALT PL+  A GTK GK+  G
Sbjct: 176 HLLLENDVQLQIGGADQWGNITAGIDLIHKMEGSDTQAFALTIPLMLKADGTKFGKSAGG 235

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKI 301
           A+WL+ E T+PY F+Q+W N DD DVV + K  T L   EI+ +AK      E  EA++ 
Sbjct: 236 AVWLDPEKTTPYEFYQFWLNQDDRDVVKYLKYFTFLGKEEIEELAKKVETEPEKREAQRR 295

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMG 351
           +A E+T  VHG+E   +A   +   F   +            ++MPT++++K        
Sbjct: 296 LAEEVTEFVHGKEAVHQAEHISKALFSGEVKDLTADEIEQGFKNMPTVTVNK----EPEN 351

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           ++  +V +G   S  +AR  + + AI IN   I + +  I          +    GKK +
Sbjct: 352 IVEWLVASGIEKSKRQAREDVTNGAIYINGDRIKDLEFMIDPSKQFDGKFVIARRGKKRY 411

Query: 412 IICHL 416
            +  +
Sbjct: 412 FLGRV 416


>gi|227541548|ref|ZP_03971597.1| tyrosine--tRNA ligase [Corynebacterium glucuronolyticum ATCC 51866]
 gi|227182704|gb|EEI63676.1| tyrosine--tRNA ligase [Corynebacterium glucuronolyticum ATCC 51866]
          Length = 419

 Score =  472 bits (1215), Expect = e-131,   Method: Composition-based stats.
 Identities = 152/416 (36%), Positives = 232/416 (55%), Gaps = 16/416 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  LS RG I+Q ++   L   C +  +T Y G+D T SSLHAGHL  L++L   Q+ 
Sbjct: 2   NIIEELSWRGLINQSTDLDALKEAC-EQPITLYCGFDPTGSSLHAGHLVPLIMLRRFQQA 60

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH  ++L GG T +IGDP    E R M+  + ++EN+  I+G  S F++    K +  +L
Sbjct: 61  GHHVLALGGGATGMIGDPRDVGE-RSMLSDETVRENLASIQGQISKFVELDGEKGE--LL 117

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W+  +  I+ LR+IG  FS+N ML  ++V+ RL+ +  +S+ EF+YM+LQA D+V 
Sbjct: 118 NNADWISKMNVIEFLRDIGKSFSLNVMLDRDTVKRRLEND-GMSYTEFSYMLLQANDYVH 176

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA-I 245
           LA+ Y+C LQ+GG DQWGNI+ G+DL  R+   K+  LT PL+T A G K GK+  G  +
Sbjct: 177 LARAYNCSLQIGGGDQWGNIVSGVDLNRRMDGRKVHGLTVPLVTDAEGKKFGKSTGGGKL 236

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIA 303
           WL+ E+TSPY+++QY+ N  D+ V+++ K  T L   EI    +    +    EA+K +A
Sbjct: 237 WLDPELTSPYSWYQYFINAGDSVVINYLKWFTFLTQEEIAEYEQKVADQPFKREAQKRLA 296

Query: 304 TEITTMVHGREEAEKAATAAMECF--------DMSIHSQHMPTISISKDEVSRGMGLLTL 355
            E+TT+VHG E  +    A    F        D    +  +   ++++        ++ L
Sbjct: 297 QELTTLVHGEEATKAVELATQALFGKAELDSLDEKTLAGALAETTVAEVSAGDEPTIVDL 356

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           +V AG A S   ARR +K      NN  I + + + K  D      + L  GKKN 
Sbjct: 357 LVAAGLAESKGAARRAIKEGGAYANNKRIEDAEWKPKESDLLHGSWLVLRKGKKNF 412


>gi|301307637|ref|ZP_07213594.1| tyrosine--tRNA ligase [Bacteroides sp. 20_3]
 gi|300834311|gb|EFK64924.1| tyrosine--tRNA ligase [Bacteroides sp. 20_3]
          Length = 430

 Score =  472 bits (1215), Expect = e-131,   Method: Composition-based stats.
 Identities = 144/428 (33%), Positives = 224/428 (52%), Gaps = 22/428 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG I  +    E      + + +AY+G D TA SLH GHL  +M+L   Q+ 
Sbjct: 2   NFVEELRWRGMIADMMPGTE--EQLQKELTSAYVGIDPTADSLHIGHLVSVMMLKHFQRA 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG-KTDALM 125
           GH+PI+L+GG T +IGDPS +   R ++    ++ N + IK   + F+ + +     A +
Sbjct: 60  GHRPIALVGGATGMIGDPSMKSAERNLLDEATLRHNQDCIKKQLAKFLDFDSEAPNAAKL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ--SLSFLEFNYMILQAYD 183
           +NN  W+    +++ +R+IG   +VN M++ +SV+ RL RE    +SF EF+Y +LQ YD
Sbjct: 120 VNNYDWMKGYSFLNFIRDIGKHITVNYMMAKDSVKKRLSRESSVGMSFTEFSYQLLQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           ++ L ++  CRLQMGG+DQWGNI  G +L  R    + +ALT PL+T A G K GKT SG
Sbjct: 180 YLYLYEHEGCRLQMGGTDQWGNITTGTELIRRTLGGEAYALTCPLITKADGGKFGKTESG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPM--SEIDRMAKLQGKEINEAKKI 301
            IWL++  TSPY F+Q+W N+ DAD   + K  T L           +     +   +K 
Sbjct: 240 NIWLDRRYTSPYKFYQFWLNVSDADAAKYIKIFTDLSQEEIAALEAEQEAAPHLRPLQKR 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDEVS 347
           +A E+T MVH  E+ E A  A+   F  S H               + +P   IS+DE++
Sbjct: 300 LAKEVTVMVHSLEDYEAAVEASNILFGNSTHEALLKLDEDTLLAVFEGVPHFDISRDELA 359

Query: 348 RGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+  + L  + A    S  E R+ ++S  +  N   ++     I          + +  
Sbjct: 360 AGIKAVDLCTEKAAIFPSKGEMRKLVQSGGVSFNKEKLAEVDTVIDCSSLLDDKYLLVQR 419

Query: 407 GKKNHIIC 414
           GKKN+ + 
Sbjct: 420 GKKNYYLL 427


>gi|51473738|ref|YP_067495.1| tyrosyl-tRNA synthetase [Rickettsia typhi str. Wilmington]
 gi|81390039|sp|Q68WH9|SYY_RICTY RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|51460050|gb|AAU04013.1| L-tyrosine-tRNATyr ligase (AMP-forming) [Rickettsia typhi str.
           Wilmington]
          Length = 411

 Score =  472 bits (1215), Expect = e-131,   Method: Composition-based stats.
 Identities = 178/409 (43%), Positives = 267/409 (65%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           F+     +G++HQ ++  +L  +  +  + AYIG+D TA+SLH G L Q+M+L  LQK G
Sbjct: 3   FIEEFIYKGYLHQCTDLDQLTAITQEVKIAAYIGFDCTATSLHIGSLMQIMILRLLQKHG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H PI ++GGGTS IGDPS ++ +R+ +  ++I+ N   IK   S FIK+G  + DA++L+
Sbjct: 63  HTPIVIIGGGTSKIGDPSGKEVTRKALTQEDIKRNTAGIKKSLSKFIKFGKDQGDAIILD 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL S+ Y+D LR+ G  FSVNRML+ +SV+ RL+R   LSFLE NYM+LQAYDF  L
Sbjct: 123 NAEWLDSLNYLDFLRDFGRHFSVNRMLTMDSVKLRLERSHHLSFLELNYMLLQAYDFYYL 182

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
           +K+Y+C LQ+GGSDQWGNI+ G DL  R+   ++F +T+PLLTTASG KMGKT +GA+WL
Sbjct: 183 SKHYNCILQLGGSDQWGNIVIGADLIRRISGKEVFGMTTPLLTTASGAKMGKTAAGAVWL 242

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           N+++ SPY+++QYWRN +DADV+ FAK  + L + E+++   L  ++IN AKK +A E+T
Sbjct: 243 NEDLLSPYDYYQYWRNCEDADVIRFAKLYSELDIIELNKFEHLVSEDINAAKKQLAYELT 302

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
            + HG   A+ A   A+  F+     +++ T  ++ + +  G+    L      A S +E
Sbjct: 303 KLCHGERLAKLALETAVRIFEQGDIDENLHTFILAPEILQAGISAYKLFYNVNLARSKSE 362

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           AR+ ++    KIN+ ++ +E + I          IKLS GKK HI+  +
Sbjct: 363 ARKIIRGKGAKINDQLVEDENMTIDTNFLLDKKVIKLSVGKKRHILVKV 411


>gi|325125059|gb|ADY84389.1| Tyr-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus
           2038]
          Length = 421

 Score =  472 bits (1215), Expect = e-131,   Method: Composition-based stats.
 Identities = 148/423 (34%), Positives = 216/423 (51%), Gaps = 17/423 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQ-GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           D L  L  RG I+Q ++   L    ++   +  Y G D T  SLH GHL   M+L   Q 
Sbjct: 5   DILEDLKWRGAINQETDEEGLRDYLAKHDDLALYCGTDPTGDSLHIGHLIPFMILKRFQL 64

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            G+KP+ ++GGGT  IGDPS R   R +   + I+ N E +            G  +  +
Sbjct: 65  AGYKPVIVIGGGTGSIGDPSGRSTERVLQSEETIKHNEEALTAQMVKLF----GTENFRI 120

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  WL  +  ++ LR+ G  F VN ML+ E V SRL  E  +SF EF+Y ILQA DF 
Sbjct: 121 VNNRDWLGKMNLLEFLRDYGKLFQVNNMLNKEVVASRL--ENGISFTEFSYQILQAIDFY 178

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSG 243
            L +++  ++Q+GG+DQWGNI  GIDL  RL+      F LT PL+  A GTK GK+  G
Sbjct: 179 ILNRDHGVQMQIGGADQWGNITAGIDLIHRLEGADRPAFGLTIPLMLKADGTKFGKSAGG 238

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKI 301
           A+WL+ E TSPY F+Q+W N DD DV+ + K  T L   EID + +    E    EA+K 
Sbjct: 239 AVWLDPEKTSPYEFYQFWINQDDRDVIKYLKYFTFLKHEEIDALEEKVKTEPWKREAQKR 298

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISI------SKDEVSRGMGLLTL 355
           +A E+T  VHG E  ++A T     F  ++       + I      S +  +    L+  
Sbjct: 299 LAEEVTKFVHGEEGLKEAQTVTEALFSGNVKDLTTKQVEIALAKAPSAESGAEKKNLVDF 358

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +V     +S  +AR  + + AI +N   I +   ++          + +  GKK + + H
Sbjct: 359 LVDTKIESSKRQAREDVNNGAIYVNGDRIQDTDFEVDPAAAFDGKFVIIRKGKKKYTLVH 418

Query: 416 LCG 418
           + G
Sbjct: 419 IKG 421


>gi|227488150|ref|ZP_03918466.1| tyrosine--tRNA ligase [Corynebacterium glucuronolyticum ATCC 51867]
 gi|227092012|gb|EEI27324.1| tyrosine--tRNA ligase [Corynebacterium glucuronolyticum ATCC 51867]
          Length = 419

 Score =  472 bits (1215), Expect = e-131,   Method: Composition-based stats.
 Identities = 152/416 (36%), Positives = 232/416 (55%), Gaps = 16/416 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  LS RG I+Q ++   L   C +  +T Y G+D T SSLHAGHL  L++L   Q+ 
Sbjct: 2   NIIEELSWRGLINQSTDLDALKEAC-EQPITLYCGFDPTGSSLHAGHLVPLIMLRRFQQA 60

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH  ++L GG T +IGDP    E R M+  + ++EN+  I+G  S F++    K +  +L
Sbjct: 61  GHHVLALGGGATGMIGDPRDVGE-RSMLSDETVRENLASIQGQISKFVELDGEKGE--LL 117

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W+  +  I+ LR+IG  FS+N ML  ++V+ RL+ +  +S+ EF+YM+LQA D+V 
Sbjct: 118 NNADWISKMNVIEFLRDIGKSFSLNVMLDRDTVKRRLEND-GMSYTEFSYMLLQANDYVH 176

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA-I 245
           LA+ Y+C LQ+GG DQWGNI+ G+DL  R+   K+  LT PL+T A G K GK+  G  +
Sbjct: 177 LARAYNCSLQIGGGDQWGNIVSGVDLNRRMDGRKVHGLTVPLVTDAEGKKFGKSTGGGKL 236

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIA 303
           WL+ E+TSPY+++QY+ N  D+ V+++ K  T L   EI    +    +    EA+K +A
Sbjct: 237 WLDPELTSPYSWYQYFINAGDSVVINYLKWFTFLTQEEIAEYEQKVADQPFKREAQKRLA 296

Query: 304 TEITTMVHGREEAEKAATAAMECF--------DMSIHSQHMPTISISKDEVSRGMGLLTL 355
            E+TT+VHG E  +    A    F        D    +  +   ++++        ++ L
Sbjct: 297 QELTTLVHGEEATKAVELATQALFGKAELDSLDEKTLAGALAETTVAEVSAGDEPTIVDL 356

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           +V AG A S   ARR +K      NN  I + + + K  D      + L  GKKN 
Sbjct: 357 LVAAGLAESKGAARRAIKEGGAYANNKRIEDAEWKPKESDLLHGSWLVLRKGKKNF 412


>gi|90407450|ref|ZP_01215634.1| tyrosyl-tRNA synthetase [Psychromonas sp. CNPT3]
 gi|90311481|gb|EAS39582.1| tyrosyl-tRNA synthetase [Psychromonas sp. CNPT3]
          Length = 423

 Score =  471 bits (1214), Expect = e-131,   Method: Composition-based stats.
 Identities = 156/416 (37%), Positives = 221/416 (53%), Gaps = 18/416 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L  RG I Q +   EL    S G  T Y G+D TA SLH G L  L+ L   Q  G
Sbjct: 4   LLEDLKARGLIAQTTADEELHEHLSSGCRTLYCGFDPTADSLHIGSLVPLLTLKRFQDAG 63

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKP++L+GG T +IGDPSF+   R++     ++  + KIK   S+FIK+G  K  A ++N
Sbjct: 64  HKPLALVGGATGLIGDPSFKAAERKLNTDDVVENWVAKIKAQVSAFIKFGDAKNAAEVVN 123

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDFVE 186
           N  W+  +  I  LR++G  FSVN M+  ESV+ R+ RE   +SF EF+YM+LQ+YDF  
Sbjct: 124 NLDWISKMDAISFLRDVGKHFSVNAMIQKESVKQRIDREGAGISFTEFSYMLLQSYDFAA 183

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L ++ DC LQ+GGSDQWGNI  GIDL  R+   K++ LT PL+T A GTK GKT SG IW
Sbjct: 184 LNESKDCTLQIGGSDQWGNITGGIDLTRRMNKKKVYGLTLPLVTKADGTKFGKTESGTIW 243

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIAT 304
           L+   TSPY F+Q+W    DADV  F +  T L ++EID +           + + I+A 
Sbjct: 244 LDATKTSPYAFYQFWITTLDADVYKFLRFFTFLSIAEIDAIEAQDKAAQGRPQGQAILAK 303

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHS-----------QHMPTISISKDEVSRGMGLL 353
           E+T +VHG      A       F   + +             +P+  +S  E      L+
Sbjct: 304 EVTKIVHGETGLASAERITEALFSGDLSALSLSDLGQLAQDGLPSTQVSGTE----KSLV 359

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
            L+  +  A S   AR  + + A+ +N    ++ +  I  +D        +  GK+
Sbjct: 360 ELLTSSELAKSNKMAREFISNGAVSVNGEKQTDSEAIILRKDALFGQYTVIKRGKR 415


>gi|81428383|ref|YP_395383.1| tyrosyl-tRNA synthetase [Lactobacillus sakei subsp. sakei 23K]
 gi|97201513|sp|Q38XK7|SYY_LACSS RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|78610025|emb|CAI55073.1| Tyrosyl-tRNA synthetase [Lactobacillus sakei subsp. sakei 23K]
          Length = 419

 Score =  471 bits (1214), Expect = e-131,   Method: Composition-based stats.
 Identities = 147/427 (34%), Positives = 227/427 (53%), Gaps = 23/427 (5%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
            + + +  L+ R  I+Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   
Sbjct: 1   MQKNIIDELTWRDAINQQTDADGLRELTEKKSISLYCGVDPTGDSMHIGHLIPFMMMKRF 60

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q  GH P  ++GGGT  IGDPS R   R++   + +Q N+E + G             + 
Sbjct: 61  QLAGHHPYIVIGGGTGSIGDPSGRKSERQLQTMEMVQHNVEALSGQMKRLF---GEDANV 117

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            M+NN  WL  I  +D LR+ G  F++N ML+ + V SRL  +  +SF EF Y ILQ+ D
Sbjct: 118 SMVNNYDWLSKISLLDFLRDYGKLFNINTMLAKDVVASRL--DVGISFTEFTYQILQSVD 175

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKLFALTSPLLTTASGTKMGKTL 241
           F+ L K +D +LQ+GG+DQWGNI  GID+  +++    +++ LT PL+  A GTK GKT 
Sbjct: 176 FMHLYKAHDVQLQIGGADQWGNITSGIDMIHKIEGSETEVYGLTIPLMLKADGTKFGKTA 235

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAK 299
            GAIWL+ E T+PY F+Q+W N DD DVV + K  T L  +EI+ +AK      E  EA+
Sbjct: 236 GGAIWLDPEKTTPYEFYQFWLNQDDRDVVKYLKYFTFLDEAEINELAKTVETAPEKREAQ 295

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM----------PTISISKDEVSRG 349
           + +A E+T  VHG+ E E A       F   I +  +          PT+ I+ ++    
Sbjct: 296 RRLAEEVTRFVHGQAELEGAQKITEVLFSGDIKALDVKEAEQAFQKAPTVEITAEK---- 351

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
             ++  +V AG  +S  +AR  +++ AI IN   +    L+I   +      + +  GKK
Sbjct: 352 KNIVDFLVDAGIESSKRQAREDVQNGAITINGDRLRETTLEIDPSENFEGKFVIVRRGKK 411

Query: 410 NHIICHL 416
            + +  +
Sbjct: 412 KYFLARV 418


>gi|116513427|ref|YP_812333.1| tyrosyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC BAA-365]
 gi|122275803|sp|Q04CC7|SYY_LACDB RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|116092742|gb|ABJ57895.1| tyrosyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC BAA-365]
          Length = 421

 Score =  471 bits (1214), Expect = e-131,   Method: Composition-based stats.
 Identities = 148/423 (34%), Positives = 215/423 (50%), Gaps = 17/423 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQ-GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           D L  L  RG I+Q ++   L    ++   +  Y G D T  SLH GHL   M+L   Q 
Sbjct: 5   DILEDLKWRGAINQETDEEGLRDYLAKHDDLALYCGTDPTGDSLHIGHLIPFMILKRFQL 64

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            G+KP+ ++GGGT  IGDPS R   R +   + I+ N E +            G  +  +
Sbjct: 65  AGYKPVIVIGGGTGSIGDPSGRSTERVLQSEETIKHNEEALTAQMVKLF----GTENFRI 120

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  WL  +  ++ LR+ G  F VN ML+ E V SRLK    +SF EF+Y ILQA DF 
Sbjct: 121 VNNRDWLGKMNLLEFLRDYGKLFQVNNMLNKEVVASRLKN--GISFTEFSYQILQAIDFY 178

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSG 243
            L +++  ++Q+GG+DQWGNI  GIDL  RL+      F LT PL+  A GTK GK+  G
Sbjct: 179 ILNRDHGVQMQIGGADQWGNITAGIDLIHRLEGADRPAFGLTIPLMLKADGTKFGKSAGG 238

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKI 301
           A+WL+ E TSPY F+Q+W N DD DV+ + K  T L   EID + +    E    EA+K 
Sbjct: 239 AVWLDPEKTSPYEFYQFWINQDDRDVIKYLKYFTFLKHEEIDALEEKVKTEPWKREAQKR 298

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISI------SKDEVSRGMGLLTL 355
           +A E+T  VHG E  ++A T     F  ++       + I      S +       L+  
Sbjct: 299 LAEEVTKFVHGEEGLKEAQTVTEALFSGNVKDLTTKQVEIALAKAPSAESGEEKKNLVDF 358

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +V     +S  +AR  + + AI +N   I +   ++          + +  GKK + + H
Sbjct: 359 LVDTKIESSKRQAREDVNNGAIYVNGDRIQDTDFEVDPAAAFDGKFVIIRKGKKKYTLVH 418

Query: 416 LCG 418
           + G
Sbjct: 419 IKG 421


>gi|73666688|ref|YP_302704.1| tyrosyl-tRNA synthetase [Ehrlichia canis str. Jake]
 gi|97201350|sp|Q3YT49|SYY_EHRCJ RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|72393829|gb|AAZ68106.1| tyrosyl-tRNA synthetase [Ehrlichia canis str. Jake]
          Length = 418

 Score =  471 bits (1214), Expect = e-131,   Method: Composition-based stats.
 Identities = 200/413 (48%), Positives = 279/413 (67%), Gaps = 1/413 (0%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
            +S FLS L  RG+ +Q +N   LD L S+  V  YIG+D TA SLH G L Q+M+L +L
Sbjct: 3   LESQFLSFLYSRGYFNQCTNVSALDQLMSKQCVPTYIGFDCTAKSLHVGSLVQIMILRYL 62

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           QK GHKPI L+G GT+ IGDPS +D+SR M+ S EI+EN   I  +   FIK+G+G TD 
Sbjct: 63  QKFGHKPIVLLGNGTTKIGDPSGKDKSRTMLCSDEIEENALGIYDVLKKFIKFGSGSTDG 122

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           L++ N  WL  + YI+ LR IG  FSVN ML+F+SVR RL+REQ+LSFLEFNYM+LQ+YD
Sbjct: 123 LLVCNAEWLDDLNYIEFLRNIGRHFSVNNMLTFDSVRLRLEREQNLSFLEFNYMLLQSYD 182

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           FVEL + Y+C LQ+GGSDQWGNI+ G++LG +L+  +LF LT+ L+ T+SG KMGKT  G
Sbjct: 183 FVELNRRYNCLLQIGGSDQWGNIVSGVELGRKLQLSELFGLTTNLVLTSSGEKMGKTAQG 242

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIA 303
           A+WLN +M SP ++WQY+RN+ D DV  F K  T LP+ +I  +  LQG EINEAKK++A
Sbjct: 243 AVWLNGDMYSPVDYWQYFRNVRDEDVGRFLKLFTELPLDKIKELELLQGHEINEAKKMLA 302

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
           TE T + HG E A+  A  A++ F+ +  S  + T  + + +V  G+ ++ L+  +G   
Sbjct: 303 TEATKICHGEEIAKNIAADALKVFECNDDS-GLSTFYVDRCDVDLGLPIIKLLQISGLEK 361

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           S++ ARR +     KIN+ ++ +   ++ L+ F +   +KLS GKK H+   L
Sbjct: 362 SSSSARRLINDKGCKINDVVVLDVNYKLSLEHFCNASYVKLSCGKKRHLKIML 414


>gi|224370578|ref|YP_002604742.1| TyrS [Desulfobacterium autotrophicum HRM2]
 gi|223693295|gb|ACN16578.1| TyrS [Desulfobacterium autotrophicum HRM2]
          Length = 431

 Score =  471 bits (1214), Expect = e-131,   Method: Composition-based stats.
 Identities = 177/430 (41%), Positives = 256/430 (59%), Gaps = 23/430 (5%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           K   L IL++RGF+  +++  EL     +   T YIG+D T  SLH GHL  +M L  +Q
Sbjct: 3   KMSVLDILNQRGFVEAVTHEDELKEYLDKEGATCYIGFDPTGPSLHVGHLVTIMALAHMQ 62

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + GH+PI+L+GGGT +IGDPS + E R+++   ++ EN + I+   S F+ +  GK  A+
Sbjct: 63  RNGHRPIALVGGGTGLIGDPSGKTEMRKVITHDQVNENKQSIQKQLSRFLDFEDGK--AM 120

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           +L+N  WL  ++YI  LR+IG  FSVN+M+  ES R R++ ++ LSF+EFNYM+LQAYDF
Sbjct: 121 LLDNADWLTGLEYISFLRDIGRHFSVNKMIKAESYRVRIESDEGLSFIEFNYMLLQAYDF 180

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           ++L + +DCRLQMGGSDQWGNI+ GIDL  R ++   F +T PL+TT+SG KMGKT  GA
Sbjct: 181 MQLCQAHDCRLQMGGSDQWGNIVAGIDLVRRTQSKTAFGITFPLITTSSGIKMGKTHKGA 240

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WL+ E TS Y ++Q+W N DDADV  F    T LPM+EID++  ++G ++N AK I+A 
Sbjct: 241 VWLDPEKTSSYEYYQFWVNTDDADVAKFMALFTFLPMAEIDQVKGIEGAKMNAAKAILAH 300

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQH--------------------MPTISISKD 344
           E T + HG   A +A  AA   F      ++                    MP+ ++  +
Sbjct: 301 EATAIAHGLAAANEAFDAAATVFGAPSIPENLCPSSHIPRDGDGNLRAASSMPSSTVDIE 360

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
            + RG+  + L V+ G + S  +ARR +      +NN  I      I   DF   G I L
Sbjct: 361 RLKRGIAAVDLFVETGLSKSKGDARRLISQGGGYLNNDRIEAFDTLILDSDF-KDGEILL 419

Query: 405 SFGKKNHIIC 414
             GKK +   
Sbjct: 420 RAGKKRYHKI 429


>gi|91762139|ref|ZP_01264104.1| tyrosyl-tRNA synthetase [Candidatus Pelagibacter ubique HTCC1002]
 gi|91717941|gb|EAS84591.1| tyrosyl-tRNA synthetase [Candidatus Pelagibacter ubique HTCC1002]
          Length = 409

 Score =  471 bits (1213), Expect = e-131,   Method: Composition-based stats.
 Identities = 189/409 (46%), Positives = 269/409 (65%), Gaps = 4/409 (0%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           FL    +RGF +Q +    L  L  +  + AYIG+D TA SLH G L Q+M L  LQK G
Sbjct: 4   FLKEFKDRGFFYQCTGEENLSQLLDKEKIRAYIGFDCTAESLHVGSLLQIMCLRLLQKHG 63

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+PI L+GGGT+ IGDPS +D++R ++  +EI++NI  I+ I  +F+     +T  + +N
Sbjct: 64  HQPIVLLGGGTTRIGDPSGKDKTRTILSEKEIEKNINNIEKILKNFLDDKDPETKPIFVN 123

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N TWL ++ YI  LR++G  F++N+MLSF+SV+ RL+REQSLS++EFNYMILQAYDF+EL
Sbjct: 124 NYTWLKNLNYISFLRDVGKHFTINKMLSFDSVKIRLEREQSLSYMEFNYMILQAYDFLEL 183

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            K   C LQ+GGSDQWGNI+ G+DL +R     ++ LT+PL+T ASG KMGKT SGA+WL
Sbjct: 184 NKKEKCMLQIGGSDQWGNIVNGVDLIKRYSNNHVYGLTTPLITLASGAKMGKTESGAVWL 243

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           +K+  S Y++WQ+WRNIDD DV+ F K  T + + EI+    ++   INE K ++A + T
Sbjct: 244 DKKFLSSYDYWQFWRNIDDRDVLKFLKIFTDINVDEIE---NIKDDNINELKILLANKAT 300

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
           +M+HG +EA K    A + F  +    ++PT  I+K  +   + +L L++ +   +S +E
Sbjct: 301 SMLHGEDEASKCQETAKQTFSENSLGDNLPTTHINKKMLDDNISILDLVILSKLESSKSE 360

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            RR +K N IKIN   IS+EK  I  +D   +  IKLS GKK HI   L
Sbjct: 361 IRRLIKGNGIKINGQAISDEKFLIT-EDLFKSSLIKLSLGKKKHIKVEL 408


>gi|313884403|ref|ZP_07818164.1| tyrosine--tRNA ligase [Eremococcus coleocola ACS-139-V-Col8]
 gi|312620187|gb|EFR31615.1| tyrosine--tRNA ligase [Eremococcus coleocola ACS-139-V-Col8]
          Length = 420

 Score =  471 bits (1213), Expect = e-131,   Method: Composition-based stats.
 Identities = 143/421 (33%), Positives = 214/421 (50%), Gaps = 21/421 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            +  L  RG I+Q ++   L  L S+  +  Y G D T  S+H GHL   M+L   Q  G
Sbjct: 3   IIDELEWRGAINQQTDADGLKKLVSEKEIYLYCGVDPTGDSMHIGHLIPFMILKRFQLAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H PI ++GG T  IGDPS R   R +   + ++ N +K+K         G G  D  ++N
Sbjct: 63  HHPIVVIGGATGSIGDPSGRTSERTLQTMEVVENNADKLKAQMIHLFNKGQG-GDFEIVN 121

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  I  +D LR+ G  F++N ML+ + V SRL  +  +SF EF+Y ILQ+ DF  L
Sbjct: 122 NHDWLGKISLLDFLRDYGKHFNINTMLAKDIVASRL--DVGISFTEFSYQILQSIDFHHL 179

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSGAI 245
            K +  +LQ+GG DQWGNI  G+D   R++ P  + + LT PL+  + GTK GK+   AI
Sbjct: 180 YKEHQVQLQIGGGDQWGNITSGLDFIRRMEGPEAEAYGLTIPLMLKSDGTKFGKSAGNAI 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIA 303
           WL+ E T+PY F+Q+W N  D DVV F K  T L   EID +AK   +   +  A++ +A
Sbjct: 240 WLDPEKTTPYEFYQFWLNQQDTDVVKFLKYFTFLSKEEIDALAKEIEERPHLRVAQQRLA 299

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLL 353
            EIT  VHG+   ++A       F   +            ++MP  +  + + +  + L 
Sbjct: 300 EEITRFVHGQAALDEAQLITKALFTGDVAQLNEKQIRDGFKNMPQFTAPQTDNTLAIWLT 359

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            +    G   S  +AR  + + AI +N   I++    I          + +  GKKN+ +
Sbjct: 360 DI----GLVDSRRQAREFVSNGAISLNGQKITDVDYPISSDLAIGGKYLIVRRGKKNYYL 415

Query: 414 C 414
            
Sbjct: 416 V 416


>gi|172058244|ref|YP_001814704.1| tyrosyl-tRNA synthetase [Exiguobacterium sibiricum 255-15]
 gi|171990765|gb|ACB61687.1| tyrosyl-tRNA synthetase [Exiguobacterium sibiricum 255-15]
          Length = 415

 Score =  471 bits (1213), Expect = e-131,   Method: Composition-based stats.
 Identities = 151/416 (36%), Positives = 224/416 (53%), Gaps = 13/416 (3%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L  RG I Q+++   +  L S    T Y G+D TA SLH GHL  +++L   Q+ G
Sbjct: 3   LLEDLEFRGLISQMTDEEGIKELLSS-PTTLYTGFDPTADSLHIGHLLPILVLRRFQEAG 61

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H  I L+GG T +IGDPS R   R +  S  ++E   +IKG  S F+    G+    + N
Sbjct: 62  HHAIGLVGGATGMIGDPSGRSTERSLNTSDIVEEFANRIKGQLSRFL-PLDGENPVTIAN 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W   +  ID LR+IG  F ++ ML+ +SV SRL+    +SF EF+YM+LQ++DF++L
Sbjct: 121 NLDWTKDLTIIDFLRDIGKHFPISYMLAKDSVDSRLQN--GISFTEFSYMLLQSFDFLKL 178

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASGTKMGKTLSGAIW 246
            +N  CRLQ+GGSDQWGNI  G++L  R+    K F +T PL+T + G K GKT  GA+W
Sbjct: 179 YENEGCRLQVGGSDQWGNITAGMELIRRVGHDQKAFGITVPLVTKSDGQKFGKTAGGAVW 238

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIAT 304
           L+ + T+PY F+Q+W N+DD DV+ F K  T L   EI+  +       E   A++ +A 
Sbjct: 239 LDADKTTPYEFYQFWFNVDDLDVIKFLKYFTFLTPDEINALQQEVETAPEKRVAQRRLAE 298

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS-----ISKDEVSRGMGLLTLIVKA 359
           E+T +VHG E  E++       F   I S     I+     + +  +     L+ ++V+A
Sbjct: 299 EMTVLVHGAEALEQSERITKALFSGEIKSLKAEDIADAFKGMPRFTLGEATNLVDILVEA 358

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
             + S  +AR  + + AI IN         +I  QD        +  GKK + +  
Sbjct: 359 KISPSKRQAREDVTNGAIYINGDREQELTKEITKQDAIGD-FTIIRRGKKKYFVLE 413


>gi|258648857|ref|ZP_05736326.1| tyrosine--tRNA ligase [Prevotella tannerae ATCC 51259]
 gi|260850876|gb|EEX70745.1| tyrosine--tRNA ligase [Prevotella tannerae ATCC 51259]
          Length = 431

 Score =  471 bits (1213), Expect = e-131,   Method: Composition-based stats.
 Identities = 148/432 (34%), Positives = 228/432 (52%), Gaps = 25/432 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG +HQ+    E   L  +  VTAY+G D TA SLH GHL  +M+L   Q  
Sbjct: 2   NFVEELRWRGMLHQLMPGTE--ELIQKERVTAYVGIDPTADSLHIGHLCGVMMLRLFQHC 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG-TGKTDALM 125
           GHKP++L+GG T +IGDPS + + R ++  + +  NI  IK     F+ +       A +
Sbjct: 60  GHKPLALIGGATGMIGDPSGKSQERNLLNEETLAHNINGIKKQLERFLDFNSDAPNAAEL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQAYD 183
           +NN  W+ +  +++ +R+IG   +VN M++ +SV+ RL  E    LSF EF+Y +LQ YD
Sbjct: 120 VNNYDWMKNYSFLEFVRDIGKHITVNYMMAKDSVQKRLNGEARDGLSFTEFSYQLLQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTL 241
           F+ L K  +C+LQMGGSDQWGNI  G +L  R   P  +++ALT PL+T A G K GKT 
Sbjct: 180 FLYLYKTKNCKLQMGGSDQWGNITTGSELIRRTLGPDNEVYALTCPLITKADGRKFGKTE 239

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAK 299
           SG IWL+ E T+PY F+Q+W N+ D +   + K  T L   E++ +      +    + +
Sbjct: 240 SGNIWLDAERTTPYEFYQFWLNVSDEEAARYIKIFTLLGREEVEALIAEHSLDPGRRQLQ 299

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDE 345
           + +  E+T MVHGREE EKA  A    F  +                   +P   +++ E
Sbjct: 300 RRLGEEVTVMVHGREEYEKALAATEILFGKATKESLLKLDEKTLLAVFSGVPHFEVARAE 359

Query: 346 VSRGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
            + G   + L  +      S  E R+ ++   + +N   +S     I  +D      + +
Sbjct: 360 -AVGAKAVDLFAEKTQCFASKGEMRKLVQGGGVSLNKEKLSAFDKTITEEDLLDGKYLLV 418

Query: 405 SFGKKNHIICHL 416
             GKKN+ +  +
Sbjct: 419 QRGKKNYYLITV 430


>gi|313206142|ref|YP_004045319.1| tyrosyl-tRNA synthetase [Riemerella anatipestifer DSM 15868]
 gi|312445458|gb|ADQ81813.1| tyrosyl-tRNA synthetase [Riemerella anatipestifer DSM 15868]
 gi|315022949|gb|EFT35972.1| tyrosyl-tRNA synthetase [Riemerella anatipestifer RA-YM]
 gi|325336413|gb|ADZ12687.1| Tyrosyl-tRNA synthetase [Riemerella anatipestifer RA-GD]
          Length = 430

 Score =  471 bits (1213), Expect = e-131,   Method: Composition-based stats.
 Identities = 159/429 (37%), Positives = 231/429 (53%), Gaps = 25/429 (5%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           F+  L  RG +H +    E   L ++ +  AYIG+D TA SLH G L  + +L   QK G
Sbjct: 4   FIEELKWRGLVHDMMPGTE--DLLNKEMTKAYIGFDPTADSLHIGSLIPIKILAHFQKHG 61

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG-TGKTDALML 126
           HKPI+L+GG T +IGDPS +   R ++    ++   E IKG  S  + +       A ++
Sbjct: 62  HKPIALVGGATGMIGDPSGKSAERNLLDEATLKHYEECIKGQLSRLLDFESDSPNKAELV 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE---QSLSFLEFNYMILQAYD 183
           NN  W+ SI +++  R+IG   +VN M++ +SV+ R   +   + +SF EF Y +LQ YD
Sbjct: 122 NNYDWMKSISFLEFARDIGKHITVNYMMAKDSVKKRFSGDAGVEGMSFTEFTYQLLQGYD 181

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ L +N   +LQMGGSDQWGNI  G +L  R    + +ALT PL+T A GTK GK+ SG
Sbjct: 182 FLHLYQNQGVKLQMGGSDQWGNITTGTELIRRKAQGEAYALTVPLITKADGTKFGKSESG 241

Query: 244 -AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKK 300
             IWL+ + TSPY F+Q+W N  D D   F K  T L   EI+ +     +  +E   +K
Sbjct: 242 ENIWLDAKKTSPYRFYQFWLNATDEDAERFIKFYTFLNKEEIEALINEHREAPHERKLQK 301

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDEV 346
            +A E+T+ VHG  E +K   A+   F  S                   +P   +S+ E+
Sbjct: 302 KLAQEVTSWVHGEAEYQKVVKASEILFGRSTAEDLVALDEATFLDIFDGVPQQELSRKEL 361

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
             GM +  L+  +GF  S  EA+R LK NAI +N S + NE+  +  +DF     I L  
Sbjct: 362 V-GMNITDLLADSGFLKSKGEAKRELKGNAISVNKSKV-NEEFCLSEKDFIDDKFILLQK 419

Query: 407 GKKNHIICH 415
           GKK++ I  
Sbjct: 420 GKKSYFIVK 428


>gi|313895688|ref|ZP_07829244.1| tyrosine--tRNA ligase [Selenomonas sp. oral taxon 137 str. F0430]
 gi|312975814|gb|EFR41273.1| tyrosine--tRNA ligase [Selenomonas sp. oral taxon 137 str. F0430]
          Length = 402

 Score =  471 bits (1213), Expect = e-131,   Method: Composition-based stats.
 Identities = 177/397 (44%), Positives = 249/397 (62%), Gaps = 10/397 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + + IL ERGF+ Q ++   L  L ++G VT YIG+D TA SLHAGH   LM +  LQK 
Sbjct: 3   NAIDILKERGFLAQCTDEEALRKLMAEGPVTFYIGFDPTADSLHAGHFIALMAMSHLQKA 62

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI L+GGGT  +GDPS R + R++M  + I+ N E  K   + FI +   +  A+M+
Sbjct: 63  GHRPICLVGGGTGTVGDPSGRTDMRKVMTDETIRHNCECFKKQIAHFIDF--TEDRAIMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           +N  WL S+ YI+LLR++G+ F+VNRML+ ES + R   E+ L+FLEFNYMI+QAYDF+E
Sbjct: 121 DNGDWLRSLNYIELLRDVGAHFTVNRMLAAESYKQR--WEKGLTFLEFNYMIMQAYDFLE 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + Y CRLQMGG DQW NII G++L  R  +  +F LT+ LLT + GTKMGKT  GA+W
Sbjct: 179 LNRRYGCRLQMGGDDQWSNIIAGVELCRRKSSKTVFGLTNKLLTKSDGTKMGKTAGGALW 238

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           L+ E TSPY+F+QYWRNIDDADV +    LT LPM E+  ++  +G EIN +K+I+A E 
Sbjct: 239 LDAEKTSPYDFYQYWRNIDDADVETCLSLLTYLPMDEVRHLSAAEGAEINRSKEILAYEA 298

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
           T +VHG E A +A + A   F             + K   + G  L+ ++ + G   S  
Sbjct: 299 TKIVHGAEAAAQARSTAQALFSGGAAED------VPKVVCATGEKLVDVLTRGGVFASKG 352

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
           EARR ++   + +N+  +S+E   +   DF +     
Sbjct: 353 EARRLIQQGGVMLNDLRVSDEHYVLGDADFSNGEAFL 389


>gi|225010140|ref|ZP_03700612.1| tyrosyl-tRNA synthetase [Flavobacteria bacterium MS024-3C]
 gi|225005619|gb|EEG43569.1| tyrosyl-tRNA synthetase [Flavobacteria bacterium MS024-3C]
          Length = 431

 Score =  471 bits (1212), Expect = e-130,   Method: Composition-based stats.
 Identities = 151/429 (35%), Positives = 223/429 (51%), Gaps = 23/429 (5%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           ++F++ L  RG +H +    E        +  AY+G D TA SLH GHL  +MLL   Q 
Sbjct: 3   TNFIAELKWRGMLHDVMPETE--EHLLSEMRAAYMGIDPTADSLHIGHLVGVMLLKHFQI 60

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP +L+GG T +IGDPS +   R ++    ++ N   +K   S F+ + +  ++A +
Sbjct: 61  AGHKPYALIGGATGMIGDPSGKSNERNLLDEATLRHNQAALKEQLSRFLDFDSEVSNAAV 120

Query: 126 -LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQAY 182
            +NN  W+    ++  +R++G   +VN M++ +SV+ RL  E  + +SF EF Y ++Q Y
Sbjct: 121 LVNNYDWMKDFSFLSFIRDVGKHITVNYMMAKDSVKKRLSSEAAEGMSFTEFTYQLVQGY 180

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DF+ L KN+ C LQMGGSDQWGNI  G +L  R+   K +ALT PL+T A GTK GKT  
Sbjct: 181 DFLHLYKNFQCTLQMGGSDQWGNITTGTELIRRIGGGKGYALTCPLITKADGTKFGKTEG 240

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKK 300
           G IWL+   TSPY F+QYW N  D D   + K  T L    I +      +   +   +K
Sbjct: 241 GNIWLDANRTSPYVFFQYWLNTSDVDAEKYIKIFTLLDQETIAKLVSDHQEAPHLRLLQK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDEV 346
            +A E+TT VHG E  E A  A+   F  +                 + +P   +    +
Sbjct: 301 NLAKEVTTAVHGSEAYENALKASDILFGKTTADVVKTLDTQTFLAVFEGVPQAVLPFSNL 360

Query: 347 SRGMGLLTLI-VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLS 405
             G+ ++  +  + GF  S  +ARR LK NAI +N   +  E   I  +D      + L 
Sbjct: 361 VNGLDMIAALSAETGFLKSNGDARRELKQNAISVNKEKV-GETYLISQKDLIDQKYVLLQ 419

Query: 406 FGKKNHIIC 414
            GKKN+ I 
Sbjct: 420 RGKKNYFIL 428


>gi|269793163|ref|YP_003318067.1| tyrosyl-tRNA synthetase [Thermanaerovibrio acidaminovorans DSM
           6589]
 gi|269100798|gb|ACZ19785.1| tyrosyl-tRNA synthetase [Thermanaerovibrio acidaminovorans DSM
           6589]
          Length = 425

 Score =  471 bits (1212), Expect = e-130,   Method: Composition-based stats.
 Identities = 148/424 (34%), Positives = 237/424 (55%), Gaps = 18/424 (4%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           + +   +LS RG +   S P EL  L +  +VT Y+G+D +A SLH G++  +M L WLQ
Sbjct: 3   RDNPFEVLSRRGLVEWCSAPEELSQLFASEMVTGYVGFDPSADSLHVGNMVPIMGLAWLQ 62

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + GH+P++++GGGT +IGDPS + + R ++   ++  N+E I+   S F+ +      A+
Sbjct: 63  RLGHRPLAIVGGGTGLIGDPSGKSKERPLLTHDQVVHNMECIREQLSLFLDFDRTPNGAV 122

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYD 183
           +LNN  WL     I  LR+   FF+VN M+S E VRSRL+  E+S+++ E +YM+LQA+D
Sbjct: 123 ILNNYDWLKDQSLIGFLRDTAKFFTVNYMISREYVRSRLEDPEKSITYTEMSYMLLQAFD 182

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F  L + Y C+LQMGG+DQ GNI+ G+DL  + +  + F  T PLL T++G K GK+  G
Sbjct: 183 FWHLYRTYGCKLQMGGNDQQGNILAGVDLIRKKEGGQAFGFTFPLLLTSTGQKFGKSEEG 242

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKKI 301
           A++L+ + TSPY F+Q+W N++D  +    +  T L    ID +        E   A++ 
Sbjct: 243 AVYLSPKRTSPYKFYQFWMNVEDQALGKLFRMYTFLEEERIDEIVSRHLASPENRSAQRE 302

Query: 302 IATEITTMVHGREEAEKAATAAMECF-----------DMSIHSQHMPTISISKDEVSRGM 350
           +A E+T+ VHG + A + A A+   F            +SI    +PT  +    ++ G 
Sbjct: 303 MAMEMTSRVHGEQVARRVAKASEMLFGDYDFRDAQEESLSILEGEVPTSRLG---LNCGE 359

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            ++ ++V AG   S  EARR LK   + +N   + +E   ++  D           GKK 
Sbjct: 360 TVVDVMVSAGICPSKGEARRLLKGGGVYLNGQRV-DEGRTLEEGDLMFQRYALFRIGKKR 418

Query: 411 HIIC 414
           + + 
Sbjct: 419 YHLV 422


>gi|315037444|ref|YP_004031012.1| tyrosyl-tRNA synthetase [Lactobacillus amylovorus GRL 1112]
 gi|325955902|ref|YP_004286512.1| tyrosyl-tRNA synthetase [Lactobacillus acidophilus 30SC]
 gi|312275577|gb|ADQ58217.1| tyrosyl-tRNA synthetase [Lactobacillus amylovorus GRL 1112]
 gi|325332467|gb|ADZ06375.1| tyrosyl-tRNA synthetase [Lactobacillus acidophilus 30SC]
 gi|327182737|gb|AEA31184.1| tyrosyl-tRNA synthetase [Lactobacillus amylovorus GRL 1118]
          Length = 420

 Score =  471 bits (1212), Expect = e-130,   Method: Composition-based stats.
 Identities = 148/423 (34%), Positives = 210/423 (49%), Gaps = 17/423 (4%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQ-GVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           K D L  L  RG I+Q ++   L    ++   +  Y G D T  SLH GHL   M+L   
Sbjct: 3   KFDILEDLKWRGAINQQTDEEGLKKYLAEHDDLALYCGTDPTGDSLHIGHLIPFMILKRF 62

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q  G+ P+ L+GGGT  IGDPS R   R +  + +++ N E +            G  + 
Sbjct: 63  QMAGYHPVILIGGGTGAIGDPSGRKTERVLQTADQVKHNEESLTNQMKKLF----GTENF 118

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            + +N  WL  +  ID LR+ G +F VN M++ + V SRL  E  +SF EF Y ILQA D
Sbjct: 119 EIRDNAEWLGKLNLIDFLRDYGKYFQVNNMINKDVVASRL--ENGISFTEFTYQILQAID 176

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTL 241
           F  L K    +LQ+GGSDQWGNI  GIDL  +L+      F LT PL+  A GTK GK+ 
Sbjct: 177 FYHLNKEDGVQLQIGGSDQWGNITAGIDLIHKLEGADRPAFGLTIPLMLKADGTKFGKSA 236

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAK 299
            GA+WL+ E TSPY F+Q+W N DD DVV + K  T L   EI+ +A+   KE     A+
Sbjct: 237 GGAVWLDPEKTSPYEFYQFWINQDDRDVVKYLKYFTFLSHEEIEDLAEKTEKEPWKRAAQ 296

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRGMGLL 353
           K +A E+T  VHG    ++A       F   I +  +P I        S +  S    L+
Sbjct: 297 KKLAEEVTKFVHGEAGLKEAQMITDALFSGDIKNLSVPQIEQGLKNAPSAEAGSEKKNLV 356

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
             +V      S  +AR  +K+ AI +N     +    +          + +  GK+ + +
Sbjct: 357 DFLVDTKIEPSKRQAREDIKNGAIYVNGDREQSVDFDVDPSSAFDGKYVIIRKGKRKYTL 416

Query: 414 CHL 416
             +
Sbjct: 417 VTI 419


>gi|325478249|gb|EGC81368.1| tyrosine--tRNA ligase [Anaerococcus prevotii ACS-065-V-Col13]
          Length = 416

 Score =  471 bits (1212), Expect = e-130,   Method: Composition-based stats.
 Identities = 166/412 (40%), Positives = 251/412 (60%), Gaps = 7/412 (1%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L +RG+  Q +N  EL  L     V  Y G+D TA SL  GHL Q+M++  +Q  
Sbjct: 11  NIFDELVDRGYYEQATNEEELKELLKNESVKFYCGFDATADSLTVGHLIQIMVMMRMQNY 70

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+P++L+GGGT++IGDPS R + R++M  + I  N E     F  F+ +  GK  A ML
Sbjct: 71  GHRPVALLGGGTTLIGDPSGRSDMRQVMTEERIDHNAECFYKQFQRFLDFSDGK--ASML 128

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN+ WL +++++  LR++GS F VN M+  ++ ++R+     L+F EF+YM+LQ+YDF++
Sbjct: 129 NNKDWLLNLEFVSFLRDVGSEFLVNEMIKKDAYKNRMAAG-GLTFFEFSYMLLQSYDFLK 187

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           + ++   +L+MGGSDQW NII G+DL ++ +  K + +T  LLTTA G KMGK+  GA+W
Sbjct: 188 MYRDDGVKLEMGGSDQWSNIIGGVDLIKKKENGKAYGMTFSLLTTADGVKMGKSQKGAVW 247

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL-QGKEINEAKKIIATE 305
           L++E TSPY  +QY RN+DD DV  F  +LT LP +E  R+      K+IN+AK+ +A E
Sbjct: 248 LDEEKTSPYEMFQYMRNVDDRDVEKFLLQLTFLPTAECRRLGSATDAKDINKAKETLAYE 307

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           +  +VHG+E+A++A  AA   F        MPT SI K+ + +G  LL L+ + G   S 
Sbjct: 308 VVKLVHGKEKADEALAAAKALFSGKGDESAMPTTSIEKENLPQG--LLALMTEVGLTKSN 365

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            EARR +K   + IN+  I++   ++  +D    G I +  GKKN     L 
Sbjct: 366 GEARRIIKQGGVSINDEKITDPSFEVT-EDIFEDGRIIIKKGKKNFHKVELA 416


>gi|145594448|ref|YP_001158745.1| tyrosyl-tRNA synthetase [Salinispora tropica CNB-440]
 gi|145303785|gb|ABP54367.1| tyrosyl-tRNA synthetase [Salinispora tropica CNB-440]
          Length = 428

 Score =  471 bits (1212), Expect = e-130,   Method: Composition-based stats.
 Identities = 139/423 (32%), Positives = 214/423 (50%), Gaps = 12/423 (2%)

Query: 2   PAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
           P  +      L  RG I   +   EL  L        Y+G+D TASSLH G L Q++   
Sbjct: 8   PQGRDTLFDDLRWRGLIQDSTGLDELRALLDGPGAAFYVGFDPTASSLHVGSLMQVVTAR 67

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKT 121
            LQ  GH+P+ L+GG T  IGDP      R +   + +   + +I+   + F+ Y  G  
Sbjct: 68  RLQLAGHRPLLLVGGATGQIGDPK-ESAERVLNSPEVVAGWVARIRDQLAPFVSYQ-GAN 125

Query: 122 DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA 181
            A ++NN  W   +  ++ LR++G  F VNRML+ E VR+RL+    +SF EF+Y +LQA
Sbjct: 126 AAQLVNNLDWTGEMSVVEFLRDVGKHFPVNRMLAREVVRARLES--GISFTEFSYQLLQA 183

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            DF EL + + C+LQ GGSDQWGNI  G+D   R     + A T+PL+T + GTK GKT 
Sbjct: 184 NDFFELHRRHGCQLQFGGSDQWGNITAGVDYIRRRGAGPVEAFTTPLVTKSDGTKFGKTE 243

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAK 299
            GA+WL+ E+TSPY F+Q+W N +D DV  + +  +  P +E++       +      A+
Sbjct: 244 GGAVWLDPELTSPYAFYQFWVNAEDRDVARYLRYFSFRPRAELEALEKEAAERPAARVAQ 303

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPT------ISISKDEVSRGMGLL 353
           + +A E+TT+VHG  E  +   A+   F     +   P              +     ++
Sbjct: 304 RALAEELTTLVHGEREMAQVVAASQALFGRGSLADLSPATLRAALTEAGLVHLDELPDVV 363

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            L+ ++G   S  EARR +      +NN+ +S+ +  +   D      + L  GK++   
Sbjct: 364 GLLKESGLVPSNKEARRVIAEGGAYLNNNRVSSTEATVAPADLLHDRYLVLRRGKRSFAG 423

Query: 414 CHL 416
             L
Sbjct: 424 VEL 426


>gi|83595896|gb|ABC25257.1| tyrosyl-tRNA synthetase [uncultured marine bacterium Ant4E12]
          Length = 435

 Score =  471 bits (1212), Expect = e-130,   Method: Composition-based stats.
 Identities = 149/422 (35%), Positives = 221/422 (52%), Gaps = 12/422 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + L+ L  RG IH  ++  EL    + G VT Y G+D TA SLH G+L  L+ L   Q  
Sbjct: 14  EILADLQARGLIHDTTDIEELGRQLAAGSVTLYCGFDPTADSLHVGNLIGLLTLRRFQMA 73

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PISL GG T +IGDPS +   R ++    + EN+E I      F+ +  G   A +L
Sbjct: 74  GHRPISLAGGATGMIGDPSGKSSERNLLDDSGLAENLEGIVPQLRQFLDF-DGPCAAKLL 132

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           +N  W   +  +D LR+IG   +VN+ML+ +SV++R+     +S+ EF+YM+LQ YD++ 
Sbjct: 133 DNRAWTVGVSVLDFLRDIGKHVTVNQMLAKDSVKNRMNDGDGISYTEFSYMLLQGYDYLW 192

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG-AI 245
           LA+N  C LQ+GGSDQWGNII GIDL  R       ALT PLLT   G+K GKT  G  I
Sbjct: 193 LAENEGCALQVGGSDQWGNIILGIDLIRRKLGKSAHALTWPLLTKPDGSKYGKTAGGETI 252

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIA 303
           WL+    SPY F+Q W  ++DA+V     +LT L + E+D +AK    +      ++ +A
Sbjct: 253 WLSANKMSPYRFYQSWIGVEDAEVKKLLLQLTFLSVDEVDSLAKAHESDPGSRIGQRTLA 312

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVS--------RGMGLLTL 355
            E+T++VHG   AE A  A+   F        +   ++                + L+ L
Sbjct: 313 HELTSIVHGTLSAEAAVQASEVLFGKGTDPGSVSKSALEFVSTEVPSSVYATNDLALIDL 372

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           + +     S  +A+R     +I +N   + +    +  +DF     + L  GKKN  +  
Sbjct: 373 LTETSLVASKGDAKRAFAEGSIYVNGERVLDSTTMVTPEDFLHDQYLLLRRGKKNWHVVE 432

Query: 416 LC 417
           L 
Sbjct: 433 LS 434


>gi|297182181|gb|ADI18352.1| tyrosyl-tRNA synthetase [uncultured actinobacterium HF4000_04C13]
          Length = 439

 Score =  470 bits (1211), Expect = e-130,   Method: Composition-based stats.
 Identities = 146/424 (34%), Positives = 226/424 (53%), Gaps = 15/424 (3%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L  RG +   ++   +    + G +T Y G+D TA SLH GHL  L+LL   Q  G
Sbjct: 16  ILDDLVARGLVQDSTDLEAIRERMADGPITLYCGFDPTADSLHVGHLVPLLLLRRFQDAG 75

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG----TGKTDA 123
           H+PI+L GG T ++GDPS R E R ++  + +  N+E +     SF+++      G   A
Sbjct: 76  HRPIALAGGATGMVGDPSGRSEERNLLDGETLTHNVEAVAVQLRSFLRFDGHLREGDQPA 135

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           ++++N  W   +  ++ LR++G   +V  ML  ES+R+RL  +Q +SF EF+YM+LQA D
Sbjct: 136 VLVDNREWTEGVGVLEFLRDVGKHVTVGTMLGKESIRARLAGDQGISFTEFSYMLLQAND 195

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F EL     C LQ+GGSDQWGNI  GID+  R +      LT PL+T A G K GKT  G
Sbjct: 196 FYELHDRLGCELQVGGSDQWGNITAGIDMIRRRRAVPAHGLTVPLMTRADGAKFGKTADG 255

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKI 301
           A+WL+   T PY   QY+ N+DD DV  F   LT LP++E+  +    G+      A+K 
Sbjct: 256 AVWLDAARTLPYELHQYFVNVDDRDVERFLLHLTLLPVAEVASIMADHGRAPESRVAQKR 315

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHM--------PTISISKDEVSRGMGLL 353
           +A E+  +VHG+ E E+A  AA   F +   +  +        P  S++  +++    L+
Sbjct: 316 LADEVCMLVHGQPETERARLAAEGLFGVDPPTGEVLEALRGIVPETSVTAGDLAGEESLV 375

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN-HI 412
            ++V AG   S  +ARR L    + +N     ++ + +          + L  G++N H+
Sbjct: 376 DVLVAAGLCGSRGDARRTLAGGGVSVNGVRQDSDAMALPADALVDGRFVLLQKGRRNRHL 435

Query: 413 ICHL 416
           +  +
Sbjct: 436 LVLV 439


>gi|323465746|gb|ADX69433.1| Tyrosine-tRNA ligase [Lactobacillus helveticus H10]
          Length = 420

 Score =  470 bits (1211), Expect = e-130,   Method: Composition-based stats.
 Identities = 149/423 (35%), Positives = 211/423 (49%), Gaps = 17/423 (4%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQ-GVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           K D L  L  RG I+Q ++   L    ++   +  Y G D T  SLH GHL   M+L   
Sbjct: 3   KFDILEDLKWRGAINQETDEEGLRKYLAEHDDLALYCGTDPTGDSLHIGHLIPFMILKRF 62

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q  G+ P+ L+GGGT  IGDPS R   R +  + +++ N E +            G  + 
Sbjct: 63  QMAGYHPVILIGGGTGAIGDPSGRKTERTLQTADQVKHNEECLTNQMKKLF----GTENF 118

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            + NN  WL  +  ID LR+ G FF VN M++ + V SRL  E  +SF EF Y ILQA D
Sbjct: 119 EIRNNAEWLGKLNLIDFLRDYGKFFQVNNMINKDVVASRL--ENGISFTEFTYQILQAID 176

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTL 241
           F  L K+   +LQ+GGSDQWGNI  GIDL  +L+      F LT PL+  A GTK GK+ 
Sbjct: 177 FYHLNKDDGVQLQIGGSDQWGNITAGIDLIHKLEGADRPAFGLTIPLMLKADGTKFGKSA 236

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAK 299
            GA+WL+ E TSPY F+Q+W N DD DVV + K  T L   EI+ +A+   KE     A+
Sbjct: 237 GGAVWLDPEKTSPYEFYQFWINQDDRDVVKYLKYFTFLSREEIEDLAEKTEKEPWKRAAQ 296

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRGMGLL 353
           K +A E+T  VHG    ++A       F  +I +  +  I        S +  S    L+
Sbjct: 297 KRLAEEVTKFVHGEAGLKEAQMITDALFSGNIKNLSVTQIEQGLKNAPSAEAGSEKKNLV 356

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
             +V      S  +AR  +K+ AI +N     +    +          + +  GK+ + +
Sbjct: 357 DFLVDTKIEPSKRQAREDIKNGAIYVNGDREQSVDFDVDPSSAFDGKYVIIRKGKRKYTL 416

Query: 414 CHL 416
             +
Sbjct: 417 VTI 419


>gi|284033307|ref|YP_003383238.1| tyrosyl-tRNA synthetase [Kribbella flavida DSM 17836]
 gi|283812600|gb|ADB34439.1| tyrosyl-tRNA synthetase [Kribbella flavida DSM 17836]
          Length = 433

 Score =  470 bits (1211), Expect = e-130,   Method: Composition-based stats.
 Identities = 153/430 (35%), Positives = 236/430 (54%), Gaps = 20/430 (4%)

Query: 2   PAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
            A ++  L  L+ RG I   ++P  L    ++G +T+Y+G+D TA SLH G+L QL+ L 
Sbjct: 6   TASRTQVLDDLASRGLIAHSTDPDALRAAMAEGPITSYVGFDPTAPSLHMGNLLQLLTLR 65

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG-K 120
            LQ  GH PI L+GG T +IGDP      R +     +Q+ +E+++G    F+ +     
Sbjct: 66  RLQLAGHNPIGLVGGATGLIGDPK-ESSERVLNPKDVVQQWVERVRGQVERFLDFDEALP 124

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
             A M+NN  W   +  +D LR+IG  F VNRML  E V++RL  EQ +S+ EF+Y++LQ
Sbjct: 125 NPARMVNNYDWTKDLNTLDFLRDIGKHFPVNRMLGREVVKARL--EQGISYTEFSYVLLQ 182

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           + D++EL + Y C LQ GGSDQWGN+  G++L  R ++ K  AL +PL+T A GTK GKT
Sbjct: 183 SLDYLELYRRYGCTLQTGGSDQWGNLTAGVELIRRTESGKAHALATPLVTKADGTKFGKT 242

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEA 298
            SG +WL++E+TSPY F+Q+W N DD DV+   +  T     EI  + K         EA
Sbjct: 243 ESGTVWLDRELTSPYAFYQFWFNTDDRDVMQLVRYYTFRTAEEIAELEKATADRPHAREA 302

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQ-----------HMPTISISKDEVS 347
           ++++A ++TT+VHGR+E E+   AA   F  S   +             P   +   ++ 
Sbjct: 303 QRVLAEDVTTLVHGRQETEQVQLAAKALFGQSDLRELDGDTLVAALREAPHTEVPGGQLP 362

Query: 348 RGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFG 407
               +  L+V++G   S + ARR +      +NN  +S+ +     +D    G + L  G
Sbjct: 363 ---PVADLLVQSGLVASKSAARRTVAEGGAYLNNEKVSDAEYVPTSEDLLPGGALVLRRG 419

Query: 408 KKNHIICHLC 417
           K++     + 
Sbjct: 420 KRSFAGVLVA 429


>gi|218781459|ref|YP_002432777.1| tyrosyl-tRNA synthetase [Desulfatibacillum alkenivorans AK-01]
 gi|254783593|sp|B8FGS9|SYY_DESAA RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|218762843|gb|ACL05309.1| Tyrosyl-tRNA synthetase [Desulfatibacillum alkenivorans AK-01]
          Length = 430

 Score =  470 bits (1211), Expect = e-130,   Method: Composition-based stats.
 Identities = 182/432 (42%), Positives = 248/432 (57%), Gaps = 22/432 (5%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
            K + L  L ERGFI Q ++ +EL+ L S   V+ YIG+D TASSLH G L  +M L  +
Sbjct: 1   MKMNVLQTLKERGFIEQTTHDQELEDLLSGEQVSCYIGFDPTASSLHVGSLVPIMSLAHM 60

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q+ GH+PI+L+GGGT ++GDPS + E R+++  +++  N E I+   + FI +  G   A
Sbjct: 61  QRAGHRPIALVGGGTGLVGDPSGKTEMRKLLTLEDVNNNAEGIRAQLARFIDFDKG---A 117

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           +  NN  WL  +KYI+ LR+ G  FSVNRM+  ES R RL+ E+ LSF+EFNYM+LQAYD
Sbjct: 118 VQENNANWLVGLKYIEFLRDFGRHFSVNRMIKAESYRMRLESEEGLSFIEFNYMLLQAYD 177

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ L   Y C+LQMGGSDQWGNI+ GIDL  R K    + +T PL+TT++G KMGKT  G
Sbjct: 178 FLHLFNEYGCQLQMGGSDQWGNIVAGIDLIRRAKGGSAYGITFPLITTSAGIKMGKTHKG 237

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIA 303
           A+WL+ E TSPY ++Q+W N  D DV  F    T LPM +I+++  L G E+N AK I+A
Sbjct: 238 AVWLDPERTSPYEYFQFWVNTHDDDVPRFLALFTFLPMEQINKVKDLDGAELNLAKTILA 297

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHM------------------PTISISKDE 345
            E TT+ HGR++A  A  AA   F        +                  PT  + +  
Sbjct: 298 FEATTLAHGRDQAVGALEAAYNMFGAREIPADLLADSSIPREGAAKAEDSVPTTVMEQAR 357

Query: 346 VSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLS 405
           +  G+    L  + G   S   ARR L      +NN  I +   +I L D      I L 
Sbjct: 358 LQEGVPAFELFDEIGLCASRGAARRLLGQGGGYVNNERIDSFDYKISLVDM-KDNEIILR 416

Query: 406 FGKKNHIICHLC 417
            GKKN+    L 
Sbjct: 417 AGKKNYHRLVLS 428


>gi|228469994|ref|ZP_04054910.1| tyrosyl-tRNA synthetase [Porphyromonas uenonis 60-3]
 gi|228308375|gb|EEK17213.1| tyrosyl-tRNA synthetase [Porphyromonas uenonis 60-3]
          Length = 436

 Score =  470 bits (1211), Expect = e-130,   Method: Composition-based stats.
 Identities = 157/434 (36%), Positives = 241/434 (55%), Gaps = 24/434 (5%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S  +S L  RG IH I    E     ++ + TAY+G+D TA SLH GHL  +M+L  LQ+
Sbjct: 4   SSLISELKARGMIHNIMPGTE--EQLTEHLTTAYVGFDPTADSLHIGHLVGVMMLRHLQR 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG-TGKTDAL 124
            GHKPI+L+GG T +IGDPS + + R ++    ++ N E I      F+ +       AL
Sbjct: 62  AGHKPIALLGGATGMIGDPSMKSQERNLLDMDTLRHNQECIGRQLGHFLDFESDAPNKAL 121

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR--EQSLSFLEFNYMILQAY 182
           +LNN  W+    +++ +R+IG   +VN M++ +SV+ RL+   E  LSF EF+Y +LQ Y
Sbjct: 122 LLNNYDWMKDYSFLNFIRDIGKHITVNYMMAKDSVKRRLEANAEAGLSFTEFSYQLLQGY 181

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           D++ L + Y CR+QMGGSDQWGNI  G +L  R+   + F +T PL+  A GTK GKT  
Sbjct: 182 DYLHLYREYGCRVQMGGSDQWGNITTGTELIRRIDGGEAFGVTCPLIKKADGTKFGKTEK 241

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKK 300
           G +WL++  TSPY F Q+W N+ D D   F K  T++P+ EID + +   +  +E   + 
Sbjct: 242 GNVWLDRRYTSPYTFCQFWLNVSDEDAERFVKIFTSIPLEEIDSLIERHRQAPHERLLQH 301

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQ--HMPTISISKD-------------- 344
            +A E+T MVHGRE+ E++ +A    F  + H Q   MP   + +               
Sbjct: 302 TLAEELTVMVHGREDYEQSMSAGQILFGNNTHDQLRQMPEELLEEVMAGVPHYNVGRTLL 361

Query: 345 EVSRGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
           E + G+ LL L+V+ A    S  E R+ + SN I +N   ++++   +   D  +   + 
Sbjct: 362 EQAGGVKLLDLLVEHAPIFKSKGELRKLIDSNGISLNKEKVADQDCVVTTDDLIAGRYLL 421

Query: 404 LSFGKKNHIICHLC 417
           +  GKKN+ +  + 
Sbjct: 422 VQRGKKNYYLIVVS 435


>gi|15604411|ref|NP_220928.1| tyrosyl-tRNA synthetase [Rickettsia prowazekii str. Madrid E]
 gi|6226208|sp|Q9ZCZ4|SYY_RICPR RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|3861105|emb|CAA15005.1| TYROSYL-TRNA SYNTHETASE (tyrS) [Rickettsia prowazekii]
 gi|292572175|gb|ADE30090.1| Tyrosyl-tRNA synthetase [Rickettsia prowazekii Rp22]
          Length = 411

 Score =  470 bits (1211), Expect = e-130,   Method: Composition-based stats.
 Identities = 179/409 (43%), Positives = 271/409 (66%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           F+     +G+++Q ++   L  +  +  + AYIG+D TA+SLH G L Q+M+L  LQK G
Sbjct: 3   FIEEFIYKGYLNQCTDLARLSAITQEAKIAAYIGFDCTATSLHIGSLMQIMILRLLQKHG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H PI ++GGGTS IGDP+ +D +R+ +  ++I+ N E IK   S FIK+G  + DA++L+
Sbjct: 63  HTPIVIIGGGTSKIGDPAGKDVTRKALTQEDIKRNAEGIKKSLSKFIKFGKDQGDAIILD 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL S+ Y+D LR+ GS+FSVNRML+ +SV+ RL R   LSFLE NYM+LQ+YDF  L
Sbjct: 123 NAEWLDSLNYLDFLRDFGSYFSVNRMLTMDSVKLRLDRSHHLSFLELNYMLLQSYDFYYL 182

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
           +KNY+C LQ+GGSDQWGNI+ G DL  ++   ++F +T+PLLTTASG KMGKT +GA+WL
Sbjct: 183 SKNYNCILQLGGSDQWGNIVIGADLIRKISGKEVFGMTTPLLTTASGAKMGKTAAGAVWL 242

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           N+++ SPY+++QYWRN +DADV+ FAK  + L + E+++   L  ++IN AKK +A E+T
Sbjct: 243 NEDLLSPYDYYQYWRNCEDADVMRFAKLYSELDIVELNKFESLVSEDINAAKKQLAYELT 302

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
            + HG   A+ A   A++ F+     +++ T  ++ + +  G+    L   A  A S +E
Sbjct: 303 KLCHGERLAKLALETAVKIFEQGDIDENLHTFILAPEILQSGISAYNLFYNANLARSKSE 362

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           AR+ ++    KIN+ ++ +E + I      +   IKLS GKK HI+  +
Sbjct: 363 ARKIIRGKGAKINDQLVEDENMTIDTNFLRNRKVIKLSVGKKRHILVKV 411


>gi|315503297|ref|YP_004082184.1| tyrosyl-tRNA synthetase [Micromonospora sp. L5]
 gi|315409916|gb|ADU08033.1| tyrosyl-tRNA synthetase [Micromonospora sp. L5]
          Length = 429

 Score =  470 bits (1211), Expect = e-130,   Method: Composition-based stats.
 Identities = 145/426 (34%), Positives = 222/426 (52%), Gaps = 12/426 (2%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           +P  +      L  RG I   +   EL  L   G  T Y+G+D TA SLH G+L Q+++ 
Sbjct: 8   LPQGRDSLTDDLLWRGLIQDSTGLDELRELLDGGSTTFYVGFDPTAPSLHIGNLMQVVMA 67

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             LQ+ GH+P+ L+GG T  IGDP      R +   + I   +E+I+   S F+ Y +G+
Sbjct: 68  RRLQQGGHRPLLLVGGATGQIGDPK-ESAERTLNPPEVIAGWVERIREQLSPFVTY-SGE 125

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
             A ++NN  W   +  ++ LR++G  F VN+ML+ E V++RL  E  +S+ EF+Y +LQ
Sbjct: 126 NAAQLVNNLDWTGEMSVVEFLRDVGKHFPVNKMLAREVVKARL--ETGISYTEFSYQLLQ 183

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           A D+ EL + + CRLQ GGSDQWGNI  G+D   R     + A T+PL+T A GTK GK+
Sbjct: 184 ANDYFELHRRHGCRLQYGGSDQWGNITAGVDYIRRRGAGPVEAFTTPLVTKADGTKFGKS 243

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEA 298
            +G IWL+ +MTSPY F+Q+W N DD DV  + +  +     E++ + K   +  +   A
Sbjct: 244 ETGTIWLDPQMTSPYAFYQFWVNADDRDVSRYLRYFSFRSREELEELEKATAERPQARLA 303

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPT------ISISKDEVSRGMGL 352
           ++ +A E+TT+VHG  E  +A  A+   F      +  P              +     +
Sbjct: 304 QRALAEELTTLVHGEREMAQAVAASQALFGRGSLDELAPETLRAALTEAGLVHLDELPDV 363

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
             L+ ++G   S  EARR +      +NN+ IS     +   D      + L  GK++  
Sbjct: 364 AGLLKESGLVPSMKEARRVIAEGGAYVNNTRISEVDATVSADDLLHGRYLVLRRGKRSFA 423

Query: 413 ICHLCG 418
              L G
Sbjct: 424 GVELRG 429


>gi|225631309|ref|ZP_03787984.1| tyrosyl-tRNA synthetase [Wolbachia endosymbiont of Muscidifurax
           uniraptor]
 gi|225590984|gb|EEH12191.1| tyrosyl-tRNA synthetase [Wolbachia endosymbiont of Muscidifurax
           uniraptor]
          Length = 383

 Score =  470 bits (1211), Expect = e-130,   Method: Composition-based stats.
 Identities = 197/380 (51%), Positives = 275/380 (72%), Gaps = 2/380 (0%)

Query: 6   SDFLSILSERGFIHQISNPRELDILC-SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           S+FL+ + ERG+++Q +N   LD L      + AYIG+D TA SLHAGHL Q+M+L  LQ
Sbjct: 5   SEFLNFIQERGYLYQCTNIEGLDQLLLQSNYIVAYIGFDCTAPSLHAGHLIQIMMLCHLQ 64

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           K G+KPI L+GGGT+ IGDPSF+D++R ++  + I +N   I+ I    + +   KT A+
Sbjct: 65  KFGYKPIVLLGGGTTKIGDPSFKDKARSILPVENINQNTSSIRRILEKMVSFNDSKTGAM 124

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           ++NN  WL +IK ID LR+IG++FSVNRMLSF+SV++RL REQ+LSFLEFNYM+LQAYDF
Sbjct: 125 IVNNADWLDNIKCIDFLRDIGAYFSVNRMLSFDSVKTRLDREQTLSFLEFNYMLLQAYDF 184

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL K YDCRLQ+GGSDQWGNI+ GI+LG++L  P+LF LT PLL  A G KMGKT SGA
Sbjct: 185 IELNKKYDCRLQIGGSDQWGNIVNGIELGKKLNLPELFGLTMPLLLNAQGKKMGKTESGA 244

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WL+  M  PY++WQY+RN+DD DV  F + LT +P+ EI ++  L+ +EINEAKK++AT
Sbjct: 245 VWLDDNMLKPYDYWQYFRNVDDQDVGRFLRLLTDVPIDEIRKLESLKDQEINEAKKVLAT 304

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E+T + HG +EAE A  AA+  F+ +  S  +P   I K++V+ G+ L+ L+   GF  S
Sbjct: 305 EVTKICHGDKEAELAQFAAISAFE-NEDSSLLPDYIIKKEQVASGISLVDLLHDTGFEPS 363

Query: 365 TNEARRHLKSNAIKINNSII 384
              A+R ++ N  KIN++++
Sbjct: 364 KGAAKRLIQGNGCKINDNVV 383


>gi|312891741|ref|ZP_07751249.1| tyrosyl-tRNA synthetase [Mucilaginibacter paludis DSM 18603]
 gi|311295772|gb|EFQ72933.1| tyrosyl-tRNA synthetase [Mucilaginibacter paludis DSM 18603]
          Length = 427

 Score =  470 bits (1210), Expect = e-130,   Method: Composition-based stats.
 Identities = 138/427 (32%), Positives = 226/427 (52%), Gaps = 19/427 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG +H I    E   L ++G+V+ YIG+D T+ SLH G L Q+M L   Q+ 
Sbjct: 2   NFVEELRWRGILHDIMPGTE--ELLNKGMVSGYIGFDPTSDSLHVGSLAQIMTLIHFQRA 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP +L+GG T ++GDPS +   R ++    +Q+N+  I+     F+ +  G+  A M+
Sbjct: 60  GHKPFALVGGATGMVGDPSGKSAERNLLSEDALQKNLAGIQAQLEKFLDFDCGQNSAEMV 119

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W     ++D +R++G   +VN M++ +SV+ RL+ E  +SF EF+Y ++Q YDF  
Sbjct: 120 NNYDWFKDFTFLDFIRDVGKHITVNYMMAKDSVKKRLEGETGMSFTEFSYQLVQGYDFYY 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L KN +C LQMGGSDQWGNI+ G +   R    + FALT+ L+  A G+K GK+  G IW
Sbjct: 180 LWKNKNCMLQMGGSDQWGNIVTGTEFIRRKSAGEAFALTTQLIKKADGSKFGKSEGGNIW 239

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKKIIAT 304
           L+ + TSPY F+Q+W N  D D  S+ +  T      I+ +         +   +K +A 
Sbjct: 240 LDADKTSPYQFYQFWLNASDEDAKSYIRIFTLFDQQTIEALETEHFAAPHLRVLQKALAK 299

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDEVSRGM 350
           +IT  VHG  E EKA  ++   F  +                   +P  +I++ +   G+
Sbjct: 300 DITIRVHGEHEYEKAIKSSEFLFGNTGIEFLNELSDKEVLALFSGVPNFTIARADFGSGV 359

Query: 351 GLLTLI-VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
            ++ L+  ++    S  EA++ ++S  + IN   +++           +   +    GKK
Sbjct: 360 NVVDLLAAQSAVFPSKGEAKKMIQSGGVAINKLKVASVDEVYSDAQLINNKFLVAQKGKK 419

Query: 410 NHIICHL 416
           N+ +  +
Sbjct: 420 NYFLIVV 426


>gi|154509115|ref|ZP_02044757.1| hypothetical protein ACTODO_01634 [Actinomyces odontolyticus ATCC
           17982]
 gi|153798749|gb|EDN81169.1| hypothetical protein ACTODO_01634 [Actinomyces odontolyticus ATCC
           17982]
          Length = 420

 Score =  470 bits (1210), Expect = e-130,   Method: Composition-based stats.
 Identities = 142/425 (33%), Positives = 223/425 (52%), Gaps = 19/425 (4%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +D L  L  RG + Q ++   L    + G VT Y GYD TA SLH GHL QL+++  LQ 
Sbjct: 2   TDILDELQWRGLLAQHTDLEALREHLNAGPVTFYCGYDPTAPSLHHGHLVQLIVMRHLQL 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+P++L+GG T  IGDP    E R++  ++ ++   +++    S F+ +  G   A M
Sbjct: 62  AGHRPLALVGGATGQIGDPRQSGE-RQLQSTEVVKGWADRLHSQISKFLDF-EGPAAATM 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  W   +  IDLLR IG +F V  ML+ + V  R+  ++ +S+ EF+Y +LQA DF+
Sbjct: 120 VNNLDWTQEMSAIDLLRTIGKYFRVGTMLNKDIVARRIASDEGISYTEFSYQVLQANDFL 179

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           EL +   C L+ GG+DQWGN++ G+DL  +++      +T+P++T A GTK GK+  GAI
Sbjct: 180 ELYRRNGCTLETGGNDQWGNMVGGVDLIRKVEGVDTHVMTTPIITKADGTKFGKSEGGAI 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIA 303
           WL+ EM +PY F+Q+W  + D DVV F K  T     EI+ +A    +      A+K +A
Sbjct: 240 WLDPEMMTPYAFYQFWLQVADDDVVRFLKIFTFKSREEIEALAVEVAERPHQRAAQKALA 299

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQ-----------HMPTISISKDEVSRGMGL 352
             +T +VHG ++ E+   A    +                   +P  S++  E      +
Sbjct: 300 ASVTELVHGADQLERVLAATDALWGGGDIRDLDEATLAAATADLPRASLTVGES----TV 355

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
               V  GF      ARR + S    INN  + + +  ++ +D  + G   +  G+KN  
Sbjct: 356 ADAFVALGFEKGKTAARRTISSGGASINNVKVEDPEAVLREEDVLAGGLALIRKGRKNLA 415

Query: 413 ICHLC 417
           +  L 
Sbjct: 416 VLELS 420


>gi|297180680|gb|ADI16889.1| tyrosyl-tRNA synthetase [uncultured gamma proteobacterium
           HF0010_16J05]
          Length = 427

 Score =  470 bits (1210), Expect = e-130,   Method: Composition-based stats.
 Identities = 160/423 (37%), Positives = 236/423 (55%), Gaps = 11/423 (2%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M   + + +     RG + QISN  +L +  S+   + Y G+D TA SLH G L  L+ L
Sbjct: 1   MEQIRENLIEEFGWRGLVFQISNKDKLALHLSEAR-SVYCGFDPTADSLHIGSLVPLLAL 59

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GH+PI L+GG T +IGDPS R + R + +   + + +EK++     F+ +  G 
Sbjct: 60  RRFQLAGHRPILLLGGATGLIGDPSGRADERNLNQHGTVAQWVEKLRTQVGRFLDF-DGA 118

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMIL 179
             A + NN  W   +  I  LR++G  FSVN M+  +SV++RL+RE Q +S+ EF+YM+L
Sbjct: 119 NAATVCNNLDWTQQLDVISFLRDVGKHFSVNAMVQRDSVKARLEREDQGISYTEFSYMLL 178

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK 239
           QA DF+ELA+   C LQ+GGSDQWGNII GIDL  R    + FALT PL+T A G+K GK
Sbjct: 179 QAMDFLELARREGCLLQIGGSDQWGNIISGIDLIRRHTGQEAFALTMPLVTKADGSKFGK 238

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINE 297
           T SGA+WL+   TSPY+F+Q+W N  DAD+  F K  T +  +EI  +     Q  E   
Sbjct: 239 TASGAVWLDANKTSPYSFYQFWLNSSDADIEKFLKLFTFMSEAEIADLVARSQQALEQRL 298

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS---QHMPTIS---ISKDEVSRGMG 351
           A++ +A ++T +VHG +    A   +   F     S   + +  +    +    VS G G
Sbjct: 299 AQRELARQVTELVHGEDAVTSAERISASLFGGDEASLQREDLKQLQLDGLPSVAVSPGDG 358

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           LL  +V  G A S+ EAR+ ++   +++N S + + KL +  +D        L  GKK H
Sbjct: 359 LLNTMVAVGAAKSSGEARKLIQGRGVRLNGSQVEDPKLAVVFEDAYFGEFFLLRKGKKQH 418

Query: 412 IIC 414
            + 
Sbjct: 419 FLL 421


>gi|260427816|ref|ZP_05781795.1| tyrosyl-tRNA synthetase [Citreicella sp. SE45]
 gi|260422308|gb|EEX15559.1| tyrosyl-tRNA synthetase [Citreicella sp. SE45]
          Length = 455

 Score =  470 bits (1210), Expect = e-130,   Method: Composition-based stats.
 Identities = 215/452 (47%), Positives = 276/452 (61%), Gaps = 41/452 (9%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           KSDF+ ++ ERGF+   ++ + LD   S+GVVTAYIGYD TA SLH GHL  +M+L WLQ
Sbjct: 6   KSDFMRVMMERGFLADCTDYQGLDEALSKGVVTAYIGYDATAKSLHVGHLLNIMMLRWLQ 65

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK---- 120
           KTGHKPI+LMGGGT+ +GDPSFR + R ++  ++I  NI+ +K +F+ ++KY        
Sbjct: 66  KTGHKPITLMGGGTTKVGDPSFRSDERPLLGPEQIDANIDGMKQVFAKYLKYQEPAEERF 125

Query: 121 ------------------------TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSF 156
                                   TDALMLNN  WL  + Y++ LR+IG  FSVNRMLSF
Sbjct: 126 WAGRMARPTDQRDINWAIDEEKATTDALMLNNAEWLDGLNYLEFLRDIGRHFSVNRMLSF 185

Query: 157 ESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL 216
           ESV+SRL REQSLSFLEFNYMILQAYDF+EL + Y C LQMGGSDQWGNII GIDL  R+
Sbjct: 186 ESVKSRLDREQSLSFLEFNYMILQAYDFLELNRRYGCLLQMGGSDQWGNIINGIDLTRRV 245

Query: 217 KTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRL 276
              +++ LTSPLLTT+ G KMGK+  GA+WLN +M SPY+FWQ+WRN  DADV  F K  
Sbjct: 246 LDHEIYGLTSPLLTTSDGRKMGKSQGGAMWLNADMLSPYDFWQFWRNTTDADVGRFLKLY 305

Query: 277 TTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM 336
           T LP+ E +R+  L G EIN AK I+A E+TT+ HG E A  A   A E F+       +
Sbjct: 306 TELPLEECERLGALGGSEINAAKIILANEVTTLCHGAEAAAAAEATAREVFEKGGIGDDL 365

Query: 337 PTISISKDEV---------SRGM--GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIIS 385
           P   +S   +           GM     ++ V A  A S  +A+R +  N   +N+  + 
Sbjct: 366 PRFDLSDIPLLPADVVEAQEPGMYCAAASIFVGAKLAKSGKDAKRLISENGALVNDVPVK 425

Query: 386 NEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
                IK  D      +KLS GKK H +  L 
Sbjct: 426 AAFPFIKADDLTD--YVKLSAGKKRHALVKLA 455


>gi|104773441|ref|YP_618421.1| tyrosyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC 11842]
 gi|123077353|sp|Q1GBW9|SYY_LACDA RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|103422522|emb|CAI97096.1| Tyrosyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC 11842]
          Length = 421

 Score =  470 bits (1209), Expect = e-130,   Method: Composition-based stats.
 Identities = 148/423 (34%), Positives = 216/423 (51%), Gaps = 17/423 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQ-GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           D L  L  RG I+Q ++   L    ++   +  Y G D T  SLH GHL   M+L   Q 
Sbjct: 5   DILEDLKWRGAINQETDEEGLRDYLAKHDDLALYCGTDPTGDSLHIGHLIPFMILKRFQL 64

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            G+KP+ ++GGGT  IGDPS R   R +   + I+ N E +            G  +  +
Sbjct: 65  AGYKPVIVIGGGTGSIGDPSGRSTERVLQSEETIKHNEEALTAQMVKLF----GTENFRI 120

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  WL  +  ++ LR+ G  F VN ML+ E V SRLK    +SF EF+Y ILQA DF 
Sbjct: 121 VNNRDWLGKMNLLEFLRDYGKLFQVNNMLNKEVVASRLKN--GISFTEFSYQILQAIDFY 178

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSG 243
            L +++  ++Q+GG+DQWGNI  GIDL  RL+      F LT PL+  A GTK GK+  G
Sbjct: 179 ILNRDHCVQMQIGGADQWGNITAGIDLIHRLEGADRPAFGLTIPLMLKADGTKFGKSAGG 238

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKI 301
           A+WL+ E TSPY F+Q+W N DD DV+ + K  T L   EID + +    E    EA+K 
Sbjct: 239 AVWLDPEKTSPYEFYQFWINQDDRDVIKYLKYFTFLKHEEIDALEEKVKTEPWKREAQKR 298

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISI------SKDEVSRGMGLLTL 355
           +A E+T  VHG E  ++A T     F  ++       + I      S +  +    L+  
Sbjct: 299 LAEEVTKFVHGEEGLKEAQTVTEALFSGNVKDLTTKQVEIALAKAPSAESGAEKKNLVDF 358

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +V     +S  +AR  + + AI +N   I +   ++          + +  GKK + + H
Sbjct: 359 LVDTKIESSKRQAREDVNNGAIYVNGDRIQDTDFEVDPAAAFDGKFVIIRKGKKKYTLVH 418

Query: 416 LCG 418
           + G
Sbjct: 419 IKG 421


>gi|238897878|ref|YP_002923557.1| tyrosine tRNA synthetase [Candidatus Hamiltonella defensa 5AT
           (Acyrthosiphon pisum)]
 gi|259517002|sp|C4K4B6|SYY_HAMD5 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|229465635|gb|ACQ67409.1| tyrosine tRNA synthetase [Candidatus Hamiltonella defensa 5AT
           (Acyrthosiphon pisum)]
          Length = 424

 Score =  470 bits (1209), Expect = e-130,   Method: Composition-based stats.
 Identities = 152/420 (36%), Positives = 222/420 (52%), Gaps = 9/420 (2%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
             ++ +  L +RG I Q+++   L     QG ++ Y G+D TA SLH GHL  L+ L   
Sbjct: 2   ISNNLIEQLEQRGLIAQVTDKTRLSERLYQGQISLYCGFDPTADSLHLGHLVPLLCLKRF 61

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q  GHKPI L+GG T +IGDPSF+   R++     + + + KI+     F+ +  G   A
Sbjct: 62  QLVGHKPIILVGGATGLIGDPSFKAGERKLNDIDTVHQWVNKIREQVEPFLDFDCGNHSA 121

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAY 182
            + NN  W   I  +  LR+IG  FSVN+M++ E+V+ RL R +  +SF EF+Y +LQ+Y
Sbjct: 122 TIENNHNWFSHINVLTFLRDIGKHFSVNQMMNKEAVKQRLSRTDSGISFTEFSYNLLQSY 181

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DF  L KN+   LQ+GGSDQWGNI  GIDL  RL    ++ LT PL+T A G+K GKT  
Sbjct: 182 DFAYLNKNHKVELQIGGSDQWGNITSGIDLTHRLNRRSVYGLTVPLITKADGSKFGKTEG 241

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE--INEAKK 300
             IWL+ + TSPY F+Q+W N  DADV  F K  T + ++ ID + +   K     +A+ 
Sbjct: 242 NTIWLDAKKTSPYQFYQFWLNTADADVYRFLKLFTFIDLNAIDALEEQDKKNDKAPQAQY 301

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLT 354
           ++A EIT MVHG+E    A       F  + H         +    I    +     L  
Sbjct: 302 VLANEITEMVHGKEGLSAAQRITASLFTGNPHDMREEDFSQLAQDGIPIVRLETDAELQK 361

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +V A  A S ++AR  ++S++I +N       +     +D        L  GKK + + 
Sbjct: 362 ALVSAQLAPSRSQARTLIQSSSISVNGKKQLKPEYIFTSEDRLLDRYTLLRRGKKYYCLI 421


>gi|227501174|ref|ZP_03931223.1| tyrosine--tRNA ligase [Anaerococcus tetradius ATCC 35098]
 gi|227216575|gb|EEI81979.1| tyrosine--tRNA ligase [Anaerococcus tetradius ATCC 35098]
          Length = 431

 Score =  470 bits (1209), Expect = e-130,   Method: Composition-based stats.
 Identities = 162/412 (39%), Positives = 248/412 (60%), Gaps = 7/412 (1%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L +RG+  Q +N  EL  L     V  Y G+D TA SL  GHL Q+M++  +Q  
Sbjct: 26  NIFDELVDRGYYEQATNEEELKDLLKNESVKFYCGFDATADSLTVGHLIQIMVMMRMQNY 85

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+P++L+GGGT++IGDPS R + R++M  + I  N +     F  F+ +  GK  A ML
Sbjct: 86  GHRPVALLGGGTTLIGDPSGRSDMRQVMTVERINHNADCFYKQFQRFLDFSDGK--ATML 143

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN+ WL ++ +++ LR++GS F VN M+  ++ ++R+     L+F EF+YM+LQ+YDF++
Sbjct: 144 NNKDWLLNLNFVEFLRDVGSEFLVNEMIKKDAYKNRMAAG-GLTFFEFSYMLLQSYDFLK 202

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           + +     L+MGGSDQW NII G+DL ++ +  K + +T  LLTTA G KMGK+  GA+W
Sbjct: 203 MYREDGVSLEMGGSDQWSNIIGGVDLIKKHENGKAYGMTFSLLTTADGVKMGKSQKGAVW 262

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL-QGKEINEAKKIIATE 305
           L++  TSPY  +QY RN+DD DV  F  +LT LP  E  R+    +  EIN+AK+I+A E
Sbjct: 263 LDENKTSPYEMFQYMRNVDDRDVEKFLLQLTFLPTGECKRLGNQTEASEINKAKEILAYE 322

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           +  +VHG+E+A++A  AA   F        MPT  I K ++ +G  LL L+ + G   S 
Sbjct: 323 VVKLVHGKEKADEALAAARALFSGKGDESAMPTSQIGKADLPKG--LLALMTETGLTKSN 380

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            EARR ++   + IN++ I++   ++  + F+    I +  GKKN     L 
Sbjct: 381 GEARRAIQQGGVSINDTKITDPSFEVTEEIFEEGR-IIIKKGKKNFHKVELA 431


>gi|241895972|ref|ZP_04783268.1| tyrosine--tRNA ligase [Weissella paramesenteroides ATCC 33313]
 gi|241871015|gb|EER74766.1| tyrosine--tRNA ligase [Weissella paramesenteroides ATCC 33313]
          Length = 419

 Score =  470 bits (1209), Expect = e-130,   Method: Composition-based stats.
 Identities = 160/426 (37%), Positives = 226/426 (53%), Gaps = 25/426 (5%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +D L+ L+ RG I+Q+++   L  L SQ  +  Y+G D T  S+H GHL   M+L   Q 
Sbjct: 3   ADILNELAWRGAINQVTDEDGLRHLISQESIGLYVGIDPTGDSMHIGHLIPFMILKRFQL 62

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP+ ++GGGT  IGDPS +   R+++  +++  N+EKI+           G+ +  +
Sbjct: 63  VGHKPVIVVGGGTGSIGDPSGKKSERKLLSQEDVAANVEKIRAQMVKLF----GENEFTI 118

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  WL  +  + +LR+ G  FSVN ML+ + V SRL  E  +SF EF Y ILQA DF 
Sbjct: 119 VNNYDWLGKMSLLGMLRDYGKLFSVNTMLAKDVVASRL--EAGISFTEFTYQILQAIDFY 176

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERL--KTPKLFALTSPLLTTASGTKMGKTLSG 243
           EL K    RLQ+GGSDQWGNI  G+DL  +L       F LT PLL  A GTK GKT  G
Sbjct: 177 ELYKREHVRLQIGGSDQWGNITNGVDLIHKLVDSEAPAFGLTVPLLLKADGTKFGKTEGG 236

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKI 301
           A+WL+ E T+P+ F+Q+W N  DADV    K  T L   EI+ +     +      A++ 
Sbjct: 237 AVWLDPEKTTPFEFYQFWLNTADADVEKMLKYFTFLSQEEINDLVAELSENAAARHAQRR 296

Query: 302 IATEITTMVHGREEAEKAATAAMECFDM-----------SIHSQHMPTISISKDEVSRGM 350
           +A E+TT VHG E    A       F             ++ + ++PT  I  D+    +
Sbjct: 297 LAQEVTTFVHGEEAMHTAEVMTNVLFGNADVASLSTDEVAVLAGNVPTFEIENDK----I 352

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
           GLL L+V AG   S   ARR +K  A++IN   I +E   I   D      + +  GKK 
Sbjct: 353 GLLDLVVAAGLEKSKTAARRSVKDGAVRINGVQIKDEDAIIDPTDKYDGKYVIVKRGKKK 412

Query: 411 HIICHL 416
             +  +
Sbjct: 413 WAVAVV 418


>gi|159482042|ref|XP_001699082.1| hypothetical protein CHLREDRAFT_139405 [Chlamydomonas reinhardtii]
 gi|158273145|gb|EDO98937.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 492

 Score =  470 bits (1209), Expect = e-130,   Method: Composition-based stats.
 Identities = 146/434 (33%), Positives = 233/434 (53%), Gaps = 22/434 (5%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           + + +S+L  RG I +++N  EL+   + G ++ Y G+D TA SLH G+L  +++L W Q
Sbjct: 59  RPNIVSLLRARGLIQEVTNTEELERAAAAGRLSVYCGFDPTADSLHLGNLLGIVVLAWFQ 118

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK--TD 122
           + GH+P++L+GG T  +GDPS R   R ++  ++I+ N+  I  +    +   +      
Sbjct: 119 RCGHEPVALLGGATGRVGDPSGRSTERPVLSEEQIEHNVTSIGNLLRGILVRNSPPDAPA 178

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
             +LNN  W  S+ ++  LRE+G F  V  M++ +SVR+R++ EQ +SF EF Y +LQ Y
Sbjct: 179 VRVLNNLDWFGSMGFLTFLREVGKFARVGTMMAKDSVRTRMESEQGISFTEFTYQLLQGY 238

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK------LFALTSPLLTTASGTK 236
           DFV L + +  R+Q+GGSDQWGNI  G DL  RL   +       + LT PLL  + G K
Sbjct: 239 DFVHLCREHGVRVQIGGSDQWGNITAGTDLIRRLLGGEDKEAPACYGLTFPLLVDSEGRK 298

Query: 237 MGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE-- 294
            GK++ GAIWL  E  SPY F+QY   + DADVV   K LT LP+ E++ +         
Sbjct: 299 FGKSVGGAIWLAAERLSPYKFYQYLFQVTDADVVKLLKMLTFLPLPEVEALEAAMRAPGY 358

Query: 295 -INEAKKIIATEITTMVHGREEAEKAATAAMEC----------FDMSIHSQHMPTISISK 343
             N A+K +A E+T  VHG E   +A  A                +   +   P+ S+ +
Sbjct: 359 VPNTAQKRLAEEVTRFVHGEEGLAQALKATEALKPGAATQLDAATLEEVAGDAPSASLPR 418

Query: 344 DEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
             V+ G  L  ++V      S + AR+ +K   + +NN+ +  E   ++ +D      + 
Sbjct: 419 ASVA-GAPLADVMVAIKLQPSKSAARKLIKGGGVYLNNAKVVEELYVVRPEDLIDGRLLL 477

Query: 404 LSFGKKNHIICHLC 417
           ++ GKKN ++  + 
Sbjct: 478 VAAGKKNKMLVRIV 491


>gi|295424905|ref|ZP_06817618.1| tyrosine--tRNA ligase [Lactobacillus amylolyticus DSM 11664]
 gi|295065405|gb|EFG56300.1| tyrosine--tRNA ligase [Lactobacillus amylolyticus DSM 11664]
          Length = 420

 Score =  470 bits (1209), Expect = e-130,   Method: Composition-based stats.
 Identities = 148/423 (34%), Positives = 216/423 (51%), Gaps = 17/423 (4%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQ-GVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           K D L  L  RG I+Q ++   L    ++   V  Y G D T  SLH GHL   M+L   
Sbjct: 3   KFDILEDLKWRGAINQQTDEEGLRKYLAEHDDVALYCGTDPTGDSLHIGHLIPFMILKRF 62

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q  G+ P+ L+GGGT  IGDPS R   R +  + +++ N + +            G  + 
Sbjct: 63  QMAGYHPVILIGGGTGAIGDPSGRKTERVLQTAAQVEHNEKCLTDQMKRLF----GTENF 118

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            ++NN+ WL  +  ID LR+ G +F VN ML+ + V SRL  E  +SF EF Y ILQA D
Sbjct: 119 EIVNNKAWLGKLNLIDFLRDYGKYFQVNNMLNKDVVASRL--ENGISFTEFTYQILQAID 176

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTL 241
           F  L KN   +L++GGSDQWGNI  GIDL  +L+      F LT PL+  A GTK GK+ 
Sbjct: 177 FYHLNKNNGVQLEIGGSDQWGNITAGIDLIHKLEGADRPAFGLTIPLMLKADGTKFGKSA 236

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAK 299
            GA+WL+ E TSPY F+Q+W N DD DVV + K  T L   EI+ +A+   KE     A+
Sbjct: 237 GGAVWLDPEKTSPYEFYQFWINQDDRDVVKYLKYFTFLSREEIEDLAEKTKKEPWKRAAQ 296

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRGMGLL 353
           K +A E+T  VHG +  ++A       F  +I    +  I        S +  ++   ++
Sbjct: 297 KKLAEEVTKFVHGEDGLKEAQMITDALFSGNIKDLSVKQIEQGLKSAPSAETDAKAKNII 356

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
             +V      S  +AR  +K+ AI +N     + +  +          + +  GK+ + +
Sbjct: 357 DFLVDTKIEPSKRQAREDVKNGAIYVNGDREQDLEFDVDPASAFEGKYVIIRKGKRKYTL 416

Query: 414 CHL 416
            H+
Sbjct: 417 VHV 419


>gi|312880689|ref|ZP_07740489.1| tyrosyl-tRNA synthetase [Aminomonas paucivorans DSM 12260]
 gi|310783980|gb|EFQ24378.1| tyrosyl-tRNA synthetase [Aminomonas paucivorans DSM 12260]
          Length = 427

 Score =  469 bits (1208), Expect = e-130,   Method: Composition-based stats.
 Identities = 152/429 (35%), Positives = 234/429 (54%), Gaps = 18/429 (4%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M   + + L +LS RG I   S P EL  L  + +VT Y+G+D +A SLH G++  +M L
Sbjct: 1   MTE-RKNALEVLSRRGLIEWCSQPEELSSLFEREMVTGYVGFDPSADSLHVGNMVPIMGL 59

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            WLQ+ GH+P++L+GGGT +IGDPS + + R+++  +++  N+  I+G    F+ +    
Sbjct: 60  AWLQRLGHRPMALVGGGTGLIGDPSGKTKERQLLSEEQVVHNMGCIRGQLERFLDFDRTP 119

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMIL 179
             AL++NN  WL    YI+ LR+ G +FSVN M++ E +RSRL+  E+S+++ E +YM+L
Sbjct: 120 NAALLVNNYDWLKKQGYIEFLRDTGKYFSVNYMINREYIRSRLEDPEKSITYTELSYMLL 179

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK 239
           QA+DF  L +   C LQMGG+DQ GN+I GIDL  + +  + +A T PLL T+SG K GK
Sbjct: 180 QAFDFHHLYRTQGCLLQMGGNDQQGNLIAGIDLIRKKEGVQAYAATFPLLLTSSGQKFGK 239

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NE 297
           +  GA++L+ E TSPY F+Q+W N +DAD+    +  T     EI  +   Q        
Sbjct: 240 SEQGAVYLSPERTSPYRFYQFWINTEDADLPKLLRMYTFWEDEEIGALLAEQAAAPERRT 299

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS-----------QHMPTISISKDEV 346
            +K +A + T  VHG E A++ A A+   F     S             +PT  +  D  
Sbjct: 300 GQKRLAWDFTCRVHGEEVAKRVARASELLFGEFDLSRLDAQVLETLVDEIPTAPLPGD-- 357

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
                L  L+ ++G   S  EA+R LK   +  N   +  E   ++  +      + L  
Sbjct: 358 -LPRSLADLLAESGACPSKGEAKRLLKGGGVSCNGRKVEREDAAVEPSELLFDRYLFLRL 416

Query: 407 GKKNHIICH 415
           GKK   +  
Sbjct: 417 GKKRFHLLR 425


>gi|331701032|ref|YP_004397991.1| Tyrosyl-tRNA synthetase [Lactobacillus buchneri NRRL B-30929]
 gi|329128375|gb|AEB72928.1| Tyrosyl-tRNA synthetase [Lactobacillus buchneri NRRL B-30929]
          Length = 418

 Score =  469 bits (1208), Expect = e-130,   Method: Composition-based stats.
 Identities = 148/425 (34%), Positives = 221/425 (52%), Gaps = 24/425 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + L  L  RG I+Q ++   L+ L +Q  V  Y+G D T  S+H GHL   M+L   Q  
Sbjct: 2   NILEDLKWRGAINQETDHEGLNELVNQKSVGIYVGIDPTGDSMHIGHLIPFMILKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P+ L+G GT  IGDPS +   R +    +I+ N   +        K         ++
Sbjct: 62  GHHPVILIGSGTGSIGDPSGKKSERVLQSMDKIKRNEIALTAQME---KLFGEDGKFEIV 118

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN +WL  +  +D LR+ G  F+VN ML+ E V SRL  E  +SF EF Y ILQA DF+ 
Sbjct: 119 NNYSWLSKLSLLDFLRDYGKLFNVNTMLNKEIVASRL--EVGISFTEFTYQILQAIDFLH 176

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSGA 244
           L ++ D +LQ+GG+DQWGNI  GIDL  +++ P  K F LT PLL  + GTK GK+  G 
Sbjct: 177 LYRHNDVQLQLGGADQWGNITSGIDLIHKIEGPDAKAFGLTIPLLLKSDGTKFGKSEGGN 236

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKII 302
           +WL+ + TSPY F+Q+W N DD DV+ + K  T L   EI  + K      E  EA++ +
Sbjct: 237 VWLDPKKTSPYEFYQFWINQDDNDVIKYLKYFTFLSQDEIADLEKKVQTQPEKREAQRKL 296

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGL 352
           A E+T  VHG+E  ++A       F  ++            ++MP++ +S    S  + +
Sbjct: 297 AEEVTEFVHGKEAVKQAEHITAALFSGNVADLTTTEIEQGFKNMPSVEVS----SEPLNI 352

Query: 353 LTLIVKA-GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           +  +V A     S  +AR  + + AI+IN   I +   +I          + +  GKK +
Sbjct: 353 VQWLVDATKIEKSRRQAREDITNGAIRINGERIEDVNYEINPAKKFDGKFVIVRRGKKKY 412

Query: 412 IICHL 416
            +  +
Sbjct: 413 FLARV 417


>gi|317507360|ref|ZP_07965095.1| tyrosyl-tRNA synthetase [Segniliparus rugosus ATCC BAA-974]
 gi|316254308|gb|EFV13643.1| tyrosyl-tRNA synthetase [Segniliparus rugosus ATCC BAA-974]
          Length = 468

 Score =  469 bits (1208), Expect = e-130,   Method: Composition-based stats.
 Identities = 148/417 (35%), Positives = 233/417 (55%), Gaps = 13/417 (3%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L  L  RG + Q ++ + L    ++G VT Y G+D TA SLHAGHL  L+    LQ+ GH
Sbjct: 45  LEELGWRGLVAQSTDEQALAEAFAKGPVTFYAGFDPTADSLHAGHLMLLLTARRLQRLGH 104

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           +P+ L GG T +IGDP    E R++  ++ ++  +E++K     F+++    T A++ NN
Sbjct: 105 RPVMLAGGATGLIGDPRDVGE-RQLADAETVRARVERLKPQLMKFVEFDDSPTGAVLANN 163

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             W   +  +D LR+IG  FSVN MLS E+++ RL     LS+ EF+Y++LQ+ D+++L 
Sbjct: 164 LDWTGELSALDFLRDIGKHFSVNVMLSRETIKKRLD-GDGLSYTEFSYLLLQSNDYLQLR 222

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT-LSGAIWL 247
           +     LQ+GGSDQWGNI+ G++L  R+    + ALT+PL+T+A GTK+GK+   G+IWL
Sbjct: 223 RRLGATLQLGGSDQWGNIVGGVELIRRVDGAHVHALTTPLVTSADGTKLGKSTGGGSIWL 282

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKIIATE 305
           + E TSPY ++QY+  + DADV  + +  T L   EI+    A  +      A++ +A E
Sbjct: 283 DPEKTSPYAWYQYFLAVQDADVGKYLRWFTDLSRPEIEELDQATAERPHQRLAQRRLAQE 342

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPT------ISISKDEVSRG--MGLLTLIV 357
           +TT+VH  EE  +  +A+   F         PT         S  EV  G  +G++ L+V
Sbjct: 343 LTTLVHSAEELRRVESASQALFGAGKLEDLDPTALGQALAETSLAEVGPGGEVGIVDLLV 402

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
             G   S N ARR ++     +NN  +++ + +    D+     + L  GK+N    
Sbjct: 403 ATGLCESRNAARRAVQEGGAWVNNQRVADAEWEPSEDDWLHGRWLVLRRGKRNLAGV 459


>gi|255658184|ref|ZP_05403593.1| tyrosine--tRNA ligase [Mitsuokella multacida DSM 20544]
 gi|260849492|gb|EEX69499.1| tyrosine--tRNA ligase [Mitsuokella multacida DSM 20544]
          Length = 402

 Score =  469 bits (1208), Expect = e-130,   Method: Composition-based stats.
 Identities = 178/398 (44%), Positives = 252/398 (63%), Gaps = 9/398 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           ++    L ERGFI Q +N +EL  L  +  VT YIG+D TA SLHAGH   LM +  +Q+
Sbjct: 2   ANVFDTLKERGFIAQCTNEKELRELFDKERVTFYIGFDPTADSLHAGHFIALMAMAHMQR 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+PI L+GGGT  +GDP+ R + R+M+  ++I+ N E  K   + FI +  GK  A+M
Sbjct: 62  AGHRPICLVGGGTGTVGDPTGRTDMRKMLTDEDIEHNCECFKKQIARFIDFSDGK--AIM 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  WL  + YIDLLR++G+ F+VNRML+ E  + R   E+ L+FLEFNYM++QAYDF+
Sbjct: 120 VNNGDWLRKLNYIDLLRDVGACFTVNRMLAAECYKQR--WEKGLTFLEFNYMVMQAYDFL 177

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           EL + Y C+L+MGG DQW NII G++L  R     ++ LT+ LLT + G KMGKT  GA+
Sbjct: 178 ELNRRYGCKLEMGGDDQWSNIIAGVELNRRKNNVAVYGLTNKLLTKSDGKKMGKTAGGAL 237

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
           WL+ E TSPY F+QYWRN+DDADV      LT LPM E+ R++ L+G  INEAK ++A E
Sbjct: 238 WLDAEKTSPYEFYQYWRNVDDADVEKCLSLLTFLPMEEVHRLSSLEGSAINEAKTVLAYE 297

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           +T +VHG EEA KA  AA   F  +  +Q MPT++        G  LL ++       S 
Sbjct: 298 VTKIVHGEEEANKAKKAAEALFGGAGSTQDMPTVA-----AETGKKLLDVLTAGKVFASK 352

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
           +E RR ++ N + +N++ +++    ++  DF     I 
Sbjct: 353 SEGRRLIQQNGLSLNDAKVTDVDYILQASDFTDGEAIV 390


>gi|194467546|ref|ZP_03073533.1| tyrosyl-tRNA synthetase [Lactobacillus reuteri 100-23]
 gi|194454582|gb|EDX43479.1| tyrosyl-tRNA synthetase [Lactobacillus reuteri 100-23]
          Length = 416

 Score =  469 bits (1208), Expect = e-130,   Method: Composition-based stats.
 Identities = 153/424 (36%), Positives = 228/424 (53%), Gaps = 24/424 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D L+ L  RG I+Q+++   L  L S+  +  Y G D T  SLH GHL   M+L   Q  
Sbjct: 2   DILNELEWRGAINQVTDEEGLRKLTSEDKIALYCGTDPTGDSLHIGHLIPFMILKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P+ ++GGGT  IGDPS R   R++    ++  N E +            G  +  ++
Sbjct: 62  GHHPVIIIGGGTGAIGDPSGRKSERQLQTMDQVHHNEEALTAQMKKLF----GTENFTIV 117

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  I  +D LR+ G  F++N ML+ E V SRL     +SF EF Y ILQ+ DF+ 
Sbjct: 118 NNYEWLSKISLLDFLRDYGKLFNINTMLNKEVVASRLDA--GISFTEFTYQILQSVDFLH 175

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSGA 244
           L ++ D +LQ+GGSDQWGNI  GIDL  +++ P  K++ LT PL+  A GTK GKT  GA
Sbjct: 176 LYRHNDVQLQIGGSDQWGNITAGIDLIHKVEGPDTKVYGLTIPLMLKADGTKFGKTAGGA 235

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKII 302
           IWL+ E TSPY F+Q+W N DD DV+ + K  T L   EID +A+   KE    EA++ +
Sbjct: 236 IWLDPEKTSPYEFYQFWINQDDRDVIKYLKYFTFLSKEEIDDLAEKVEKEPWKREAQRRL 295

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGL 352
           A E+T  VHG+E  E+A   +   F   +            ++MP++ +     ++   +
Sbjct: 296 AQEVTKFVHGQEAVEEAERISKALFSGDVADLSAAEIEQGFKNMPSVDVE----NKKENI 351

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           +  +   G   S  +AR+ + S AI+IN   + +   +I  Q       + +  GKK++ 
Sbjct: 352 VVWLTDNGIEPSRRQARQDVSSGAIRINGEKVDDVDAEIDPQAHFDGKFVIVRKGKKHYY 411

Query: 413 ICHL 416
           +  +
Sbjct: 412 LARV 415


>gi|91224114|ref|ZP_01259377.1| tyrosyl-tRNA synthetase [Vibrio alginolyticus 12G01]
 gi|91191025|gb|EAS77291.1| tyrosyl-tRNA synthetase [Vibrio alginolyticus 12G01]
          Length = 419

 Score =  469 bits (1208), Expect = e-130,   Method: Composition-based stats.
 Identities = 155/422 (36%), Positives = 227/422 (53%), Gaps = 24/422 (5%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L +RG I Q S+  E+  L SQ   T Y G+D TA SLH GHL  L++L   Q  G
Sbjct: 5   LLQDLQDRGLIAQASDLEEIQTLLSQ-PQTVYCGFDPTAGSLHIGHLVPLIMLKRFQDAG 63

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+ ++L+GG T +IGDPSF+   R +   + +   +  +       +     K    M+N
Sbjct: 64  HQAVALIGGATGMIGDPSFKATERSLNSEEIVSGWVNDLSNQIQQLMNLQLTKPMI-MVN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDFVE 186
           N  W+ +I  ID  R++G  FS+N M++ +SV+ RL+R +Q +SF EF+Y +LQ+YDF E
Sbjct: 123 NADWMKAINVIDFFRDVGKHFSINTMVNRDSVKQRLQRPDQGISFTEFSYALLQSYDFAE 182

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + Y CRLQ+GG+DQWGNI+ GIDL  R    ++F LT PL+T + GTK GKT  GA+W
Sbjct: 183 LNRRYGCRLQIGGNDQWGNIVSGIDLTRRQNGEQVFGLTLPLITKSDGTKFGKTEGGAVW 242

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIAT 304
           L+   TSPY F+Q+W   +DADV  F +  T L   EI  +       +   +A++I+A 
Sbjct: 243 LDPSKTSPYAFYQFWLGAEDADVYHFLRYYTFLSCEEIASIEAQDQTSQGKPQAQRILAE 302

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHS-----------QHMPTISISKDEVSRGMGLL 353
           E+T  VHG E    A       F  ++               +P+I       S    L+
Sbjct: 303 EMTRFVHGEEGLASAERITQALFSGNVQQLSLGELKQLELDGLPSIE------SAQQDLV 356

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            L+V++G A+S   AR H+ +NAI +N   +S +   +    FD      L  GKK+  +
Sbjct: 357 ELLVESGLASSKRVAREHISNNAISVNGEKVSADNPSLSFPLFD--QYWLLQRGKKHFCL 414

Query: 414 CH 415
             
Sbjct: 415 VK 416


>gi|283853234|ref|ZP_06370486.1| tyrosyl-tRNA synthetase [Desulfovibrio sp. FW1012B]
 gi|283571407|gb|EFC19415.1| tyrosyl-tRNA synthetase [Desulfovibrio sp. FW1012B]
          Length = 424

 Score =  469 bits (1208), Expect = e-130,   Method: Composition-based stats.
 Identities = 149/423 (35%), Positives = 219/423 (51%), Gaps = 14/423 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    LS RG +HQ S+   L           Y G+D TA SLH G+L  L+ L    K 
Sbjct: 2   NIFDELSWRGLLHQTSDDAGLRDHLETPGRVLYCGFDPTADSLHIGNLVPLLALARFAKA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP+ L+GG T +IGDPS +D+ R++     +  + EKIK    +F +          +
Sbjct: 62  GHKPLFLLGGATGLIGDPSGKDKERQLKTEDLVGASAEKIKAQAMAFFERLGVADAVTPV 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL-KREQSLSFLEFNYMILQAYDFV 185
           NN  W   I  I+ LR+ G  F++N ML+ +SV+SR+ + E  +S+ EF+YMILQ+ DF 
Sbjct: 122 NNLDWTRPISIIEFLRDTGKHFTINYMLAKDSVKSRIGREETGISYTEFSYMILQSLDFE 181

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L +   C LQ+GG DQ+GNI  G++L  R    + + LT PL+TTASG K GK+  GAI
Sbjct: 182 HLCRTQGCTLQIGGGDQFGNITAGLELIRRKTGRQAYGLTFPLITTASGAKFGKSEKGAI 241

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIA 303
           +LN E+TSPY F+QYW N DD DVV+F +  T L   +I+ +A     E     A+K +A
Sbjct: 242 FLNPELTSPYAFYQYWINADDRDVVNFLRYFTFLSQEDIEALAGQTEAEPHLRAAQKRLA 301

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKD----------EVSRGMGLL 353
            E T M+HG  E  K        F     +  +   ++              +     L 
Sbjct: 302 RETTAMIHGDAELAKVEAVTEALFGGGDLT-TVDAATLKAALQAAPGRNYPTLGDVPPLP 360

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            L+       S ++AR+ +K+  + INN  ++ E   +  +DF     + L  GKKN+ +
Sbjct: 361 KLLADLALCPSNSQARKDIKAGGVSINNVRVTAEDRTLVPEDFLGGDLLILRKGKKNYGV 420

Query: 414 CHL 416
             L
Sbjct: 421 VTL 423


>gi|269961889|ref|ZP_06176246.1| tyrosyl-tRNA synthetase [Vibrio harveyi 1DA3]
 gi|269833467|gb|EEZ87569.1| tyrosyl-tRNA synthetase [Vibrio harveyi 1DA3]
          Length = 418

 Score =  469 bits (1208), Expect = e-130,   Method: Composition-based stats.
 Identities = 153/416 (36%), Positives = 226/416 (54%), Gaps = 12/416 (2%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            +  L  RG I Q S+  ++  L S+   T Y G+D TA SLH GHL  L++L   Q  G
Sbjct: 3   LIEDLQARGLIAQASDLDQVQQLLSE-PQTLYCGFDPTAGSLHIGHLVPLIMLKRFQDAG 61

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+ I+L+GG T +IGDPSF+   R +   + +   ++ +       +     K    M+N
Sbjct: 62  HQAIALIGGATGMIGDPSFKATERSLNSEETVAGWVQDLSNQIQQLMNNQVSKPMI-MVN 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDFVE 186
           N  W+  I  ID  R++G  FSVN M+S ESV+ RL+R +Q +SF EF+Y +LQ+YDF E
Sbjct: 121 NADWVKQINVIDFFRDVGKHFSVNTMISRESVKQRLQRPDQGISFTEFSYALLQSYDFAE 180

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + + CRLQ+GG+DQWGNI+ GIDL  R    ++F LT PL+T + GTK GKT  GA+W
Sbjct: 181 LNRQHGCRLQIGGNDQWGNIVSGIDLTRRQNGEQVFGLTLPLITKSDGTKFGKTEGGAVW 240

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIAT 304
           L+   TSPY F+Q+W + +DADV  F +  T L   EI  +     + K   +A++I+A 
Sbjct: 241 LDPSKTSPYAFYQFWLSAEDADVYHFLRYYTFLSCDEIAAIEAQDKESKGKPQAQRILAE 300

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI-SISKDEV----SRGMGLLTLIVKA 359
           ++T  VHG E    A       F  ++    +  +  +  D +    S    L+ L+V++
Sbjct: 301 QMTRFVHGEEGLASAERITQALFSGNVQQLSLSELKQLELDGLPSMQSAEQDLVELLVES 360

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           G A S   AR  + +NAI +N   +  E   +    FD      L  GKK+  +  
Sbjct: 361 GLANSKRIARELIGNNAISVNGEKVDAENPSLNFPLFD--QYWLLQRGKKHFYLVK 414


>gi|294628647|ref|ZP_06707207.1| tyrosyl-tRNA synthetase [Streptomyces sp. e14]
 gi|292831980|gb|EFF90329.1| tyrosyl-tRNA synthetase [Streptomyces sp. e14]
          Length = 422

 Score =  469 bits (1208), Expect = e-130,   Method: Composition-based stats.
 Identities = 142/422 (33%), Positives = 228/422 (54%), Gaps = 11/422 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +D +  L  RG     ++   L    + G VT Y G+D TA SLH GHL Q++ +  LQ+
Sbjct: 2   TDIVDELKWRGLFALSTDEDALRKALADGPVTFYCGFDPTAPSLHVGHLVQVLTVRRLQQ 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+P++L+GG T +IGDP      R +   + +   +EK++     F+ +  G+  A+M
Sbjct: 62  AGHRPLALVGGATGLIGDPRP-TAERTLNDPETVAGWVEKLRRQIEPFLSF-EGENAAVM 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  W   +  I+ LR+IG  F VN+ML+ +SV  RL+ +Q +S+ EF+Y ILQ  DF+
Sbjct: 120 VNNLDWTEGLSAIEFLRDIGKHFRVNKMLTKDSVARRLESDQGISYTEFSYQILQGMDFL 179

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASGTKMGKTLSGA 244
           +L + + C LQ GGSDQWGN+  G+DL  RL+    + AL +PL+T A GTK GKT  GA
Sbjct: 180 QLYRRHGCTLQQGGSDQWGNLTAGLDLIHRLEPDASVHALATPLMTKADGTKFGKTEGGA 239

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKII 302
           +WL+ EMT+PY F+Q+W N+DD D+  + + L+     E++ + +   +      A++ +
Sbjct: 240 VWLDAEMTTPYAFYQFWLNVDDRDISKYLRILSFRSREELEELERQTEERPQARAAQRAL 299

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQ------HMPTISISKDEVSRGMGLLTLI 356
           A E+TT+VHG ++      A+   F     ++            +   +V+    ++ L 
Sbjct: 300 AEELTTLVHGADQTAAVIAASKALFGQGELAELDERTLAAALSEVPHVQVAELGQVVDLF 359

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            + G   S + ARR +K     +NN  ++ E      +D      + L  GKKN     +
Sbjct: 360 AEVGLVASKSAARRTVKEGGAYVNNVKVTAEDAVPAREDLLHGRWLVLRRGKKNLAAVEV 419

Query: 417 CG 418
            G
Sbjct: 420 TG 421


>gi|256844327|ref|ZP_05549813.1| tyrosyl-tRNA synthetase [Lactobacillus crispatus 125-2-CHN]
 gi|295692058|ref|YP_003600668.1| tyrosyl-tRNA synthetase [Lactobacillus crispatus ST1]
 gi|256613405|gb|EEU18608.1| tyrosyl-tRNA synthetase [Lactobacillus crispatus 125-2-CHN]
 gi|295030164|emb|CBL49643.1| Tyrosyl-tRNA synthetase [Lactobacillus crispatus ST1]
          Length = 420

 Score =  469 bits (1207), Expect = e-130,   Method: Composition-based stats.
 Identities = 148/423 (34%), Positives = 213/423 (50%), Gaps = 17/423 (4%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQ-GVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           K D L  L  RG I+Q ++   L    ++   +  Y G D T  SLH GHL   M+L   
Sbjct: 3   KFDILEDLKWRGAINQETDEEGLRKYLAEHDDLALYCGTDPTGDSLHIGHLIPFMILKRF 62

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q  G+ P+ L+GGGT  IGDPS R   R +  +++++ N E +            G  + 
Sbjct: 63  QMAGYHPVILIGGGTGAIGDPSGRKTERTLQTAEQVKHNEESLTNQMKKLF----GTENF 118

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            + NN  WL  +  ID LR+ G FF VN M++ + V SRL  E  +SF EF Y ILQA D
Sbjct: 119 EIRNNAEWLSKLNLIDFLRDYGKFFQVNNMINKDVVASRL--ENGISFTEFTYQILQAID 176

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTL 241
           F  L K+   +LQ+GGSDQWGNI  GIDL  +L+      F LT PL+  A GTK GK+ 
Sbjct: 177 FYHLNKDDGVQLQIGGSDQWGNITAGIDLIHKLEGADRPAFGLTIPLMLKADGTKFGKSA 236

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAK 299
            GA+WL+ E TSPY F+Q+W N DD DVV + K  T L   EI+ +A+   KE     A+
Sbjct: 237 GGAVWLDPEKTSPYEFYQFWINQDDRDVVKYLKYFTFLSREEIEDLAEKTEKEPWKRAAQ 296

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRGMGLL 353
           K +A E+T  VHG    E+A       F  +I +  +  I        S +  +    ++
Sbjct: 297 KKLAEEVTKFVHGEAGLEEAKMITDALFSGNIKNLSVAQIEQGLKNAPSAEAGNEKKNIV 356

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
             +V      S  +AR  +K+ AI +N     +   ++          + +  GK+ + +
Sbjct: 357 DFLVDTKIEPSKRQAREDVKNGAIYVNGDREQSTDFEVDPSSDFDGKYVIIRKGKRKYTL 416

Query: 414 CHL 416
             +
Sbjct: 417 VTI 419


>gi|309813251|ref|ZP_07706971.1| tyrosine--tRNA ligase [Dermacoccus sp. Ellin185]
 gi|308432788|gb|EFP56700.1| tyrosine--tRNA ligase [Dermacoccus sp. Ellin185]
          Length = 433

 Score =  469 bits (1207), Expect = e-130,   Method: Composition-based stats.
 Identities = 147/420 (35%), Positives = 227/420 (54%), Gaps = 10/420 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ L  L  RG + Q ++  +L    + G +T Y G+D TA SLH G+L QL+ L  LQ+
Sbjct: 15  SNILDELQWRGAVAQTTDETQLRDALANGPLTVYCGFDPTAPSLHFGNLVQLIQLRRLQR 74

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+ I L+GG T +IGDP      R +    +  + + +I+     F+ +  G   A+ 
Sbjct: 75  AGHRVIVLVGGSTGLIGDPRP-SAERVLKTKDQTAQWVARIREQVQPFLDF-DGDNPAIA 132

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  W   I  +D LR+ G  F VN M+  ++V +RL  EQ +S+ EF+Y ILQA D++
Sbjct: 133 VNNLDWTQGISALDFLRDYGKHFRVNGMIKKDAVAARLNSEQGISYTEFSYQILQALDYL 192

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L + Y C LQ+GGSDQWGN+I G DL   ++   +  LTSPLLT ASG K GK+   AI
Sbjct: 193 HLFREYGCTLQLGGSDQWGNLIAGSDLIRSVEGKSVHVLTSPLLTDASGQKYGKSEGNAI 252

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIA 303
           WL+ +MTSPY F+QY+ N++D++V+   K +T     E+ ++ +   +E     A+K +A
Sbjct: 253 WLDAQMTSPYAFYQYFLNVEDSEVIKLIKFITDRTKDEVAQLERAVAEEPFKRAAQKTLA 312

Query: 304 TEITTMVHGREEAEKAATAAMECFDMS----IHSQHM--PTISISKDEVSRGMGLLTLIV 357
            ++TT+VHG      A  A+   F       + +  +      +   EVS G  L   ++
Sbjct: 313 ADVTTLVHGEAATAGAIAASEAMFGKGDVTALDAGTLRDAVAELPGGEVSPGTTLTDALI 372

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
             G A S N ARR +   AI +NN+ + + + ++   DF       +  G+K+     L 
Sbjct: 373 AVGIAESRNAARRLIGDGAISVNNAKLDDPEHELNADDFLHGVAAIIKRGRKHQAAARLA 432


>gi|227486177|ref|ZP_03916493.1| tyrosine--tRNA ligase [Anaerococcus lactolyticus ATCC 51172]
 gi|227235808|gb|EEI85823.1| tyrosine--tRNA ligase [Anaerococcus lactolyticus ATCC 51172]
          Length = 417

 Score =  469 bits (1207), Expect = e-130,   Method: Composition-based stats.
 Identities = 160/412 (38%), Positives = 245/412 (59%), Gaps = 6/412 (1%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L +RG+  Q +N  EL    +   V  Y G+D TA SL  GHL Q+M++  +Q  
Sbjct: 11  NVFDELVDRGYYEQATNEEELKKKLATESVKFYCGFDATADSLTVGHLIQIMVMMRMQNY 70

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+P++L+GGGT++IGDPS R + R++M  + I  N E     F  F+ +   +  A ML
Sbjct: 71  GHRPVALLGGGTTLIGDPSGRSDMRQVMTVERINHNAECFYKQFQRFLDFSD-EGGAEML 129

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN+ WL  + ++  LR++GS F VN M+  ++ ++R+     L+F EF+YM+LQ+YDF++
Sbjct: 130 NNKDWLLDLNFVGFLRDVGSEFLVNEMIKKDAYKNRMAAG-GLTFFEFSYMLLQSYDFLK 188

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           + +     L+MGGSDQW NII G+DL ++ +    + +T  LLTTA G KMGK+  GA+W
Sbjct: 189 MYRENGVTLEMGGSDQWSNIIGGVDLIKKHEQGDAYGMTFALLTTADGIKMGKSQKGAVW 248

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL-QGKEINEAKKIIATE 305
           L+KE TSP+  +QY RN+DD DV  F  +LT LP +E  ++ +  +  EIN+AK+I+A E
Sbjct: 249 LDKEKTSPFEMFQYMRNVDDRDVEKFLLQLTFLPTAECRKLGQATEAAEINKAKEILAYE 308

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           +  +VHG+EEA+ A  AA   F        MPT  IS  ++ +G  LL L+ + G   S 
Sbjct: 309 VVKLVHGKEEADAALDAAKALFSGKGDESAMPTTQISASDLPKG--LLALMTEVGLTKSN 366

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            EARR ++   + IN+  I++   ++  + F+    I +  GKKN     L 
Sbjct: 367 GEARRTVQQGGVSINDEKITDPAFEVTEEIFEDNR-IIIKKGKKNFHKVELA 417


>gi|313674441|ref|YP_004052437.1| tyrosyl-tRNA synthetase [Marivirga tractuosa DSM 4126]
 gi|312941139|gb|ADR20329.1| tyrosyl-tRNA synthetase [Marivirga tractuosa DSM 4126]
          Length = 433

 Score =  469 bits (1207), Expect = e-130,   Method: Composition-based stats.
 Identities = 133/436 (30%), Positives = 228/436 (52%), Gaps = 25/436 (5%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
            + +F+  L  RG IH +     ++   ++ + +AY+G D TA SLH GHL  +M+L   
Sbjct: 1   MQKNFIEELQWRGMIHDMMP--GIEKQLAKEMSSAYVGIDPTADSLHIGHLVGVMMLKHF 58

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG-TGKTD 122
           Q  GHKPI L+GG T +IGDPS + + R ++    ++ N   IK    +F+ +       
Sbjct: 59  QDAGHKPIILLGGATGMIGDPSGKSQERNLLDEPTLRHNEASIKAQIKNFLDFDAKEDNS 118

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQ 180
           A ++NN  W+    ++  +R++G   +VN M++ +SV+ RL  E  + +SF EF Y ++Q
Sbjct: 119 AELVNNYDWMKDFSFLGFIRDVGKHITVNYMMAKDSVKKRLSSESSEGMSFTEFTYQLVQ 178

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
            YDF+ L +  +C+LQMGGSDQWGNI  G ++  ++   + FA+T PL+  A G+K GKT
Sbjct: 179 GYDFLHLFRKKNCKLQMGGSDQWGNITTGTEMIRKMDQGEAFAVTCPLIKKADGSKFGKT 238

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEA 298
            +G IWL+ + TSPY F+Q+W N  D D+ +F +  +T   +EI+ + K       +   
Sbjct: 239 ETGNIWLDPKKTSPYKFYQFWLNASDEDMSNFIRIFSTKGKAEIEALEKEHNEAPHLRVL 298

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKD 344
           +K +A E+T  VH +E  + A  A+   F  S                 + +P ++I+K 
Sbjct: 299 QKALAEELTVRVHSQEALDMALKASSILFGKSTTEELQSIDEDTLLSVFEGVPQVNITKS 358

Query: 345 EVSRGMGLLTLIVKAG---FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
           ++ +   +   + +        S  EA++ +K   + IN   + +    +++        
Sbjct: 359 DLDKTENVTDFLSELTQGIIFPSKGEAKKMIKGGGVSINKEKVLDANAPVEIS-LLQGKY 417

Query: 402 IKLSFGKKNHIICHLC 417
           I    GKKN+ +  + 
Sbjct: 418 ILAQKGKKNYYLVTVS 433


>gi|227894187|ref|ZP_04011992.1| tyrosyl-tRNA synthetase [Lactobacillus ultunensis DSM 16047]
 gi|227863992|gb|EEJ71413.1| tyrosyl-tRNA synthetase [Lactobacillus ultunensis DSM 16047]
          Length = 420

 Score =  469 bits (1207), Expect = e-130,   Method: Composition-based stats.
 Identities = 150/423 (35%), Positives = 211/423 (49%), Gaps = 17/423 (4%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQ-GVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           K D L  L  RG I+Q ++   L    ++   +  Y G D T  SLH GHL   M+L   
Sbjct: 3   KFDILEDLKWRGAINQETDEEGLRKYLAEHDDLALYCGTDPTGDSLHIGHLIPFMILKRF 62

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q  G+ P+ L+GGGT  IGDPS R   R +  + +++ N E +            G  + 
Sbjct: 63  QMAGYHPVILIGGGTGAIGDPSGRKTERTLQTAAQVKHNEECLTNQMKKLF----GTENF 118

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            + NN  WL  I  ID LR+ G FF VN M++ + V SRL  E  +SF EF Y ILQA D
Sbjct: 119 EIRNNAEWLGKINLIDFLRDYGKFFQVNNMINKDVVASRL--ENGISFTEFTYQILQAID 176

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTL 241
           F  L K+   +LQ+GGSDQWGNI  GIDL  +L+      F LT PL+  A GTK GK+ 
Sbjct: 177 FYHLNKDDGVQLQIGGSDQWGNITAGIDLIHKLEGADRPAFGLTIPLMLKADGTKFGKSA 236

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAK 299
            GA+WL+ E TSPY F+Q+W N DD DVV + K  T L   EI+ +A+   KE     A+
Sbjct: 237 GGAVWLDPEKTSPYEFYQFWINQDDRDVVKYLKYFTFLSREEIEDLAEKTEKEPWKRAAQ 296

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRGMGLL 353
           K +A E+T  VHG    ++A       F  +I +  +  I        S +  S    L+
Sbjct: 297 KKLAEEVTKFVHGEAGLKEAQMITDALFSGNIKNLSVIQIEQGLKNAPSAEAGSERKNLV 356

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
             +V      S  +AR  +K+ AI +N     +    +          + +  GK+ + +
Sbjct: 357 DFLVDTKIEPSKRQAREDIKNGAIYVNGDREQSVDFDVDPSSAFDGKYVIIRKGKRKYTL 416

Query: 414 CHL 416
             +
Sbjct: 417 VTV 419


>gi|328464009|gb|EGF35505.1| tyrosyl-tRNA synthetase [Lactobacillus helveticus MTCC 5463]
          Length = 420

 Score =  469 bits (1207), Expect = e-130,   Method: Composition-based stats.
 Identities = 150/423 (35%), Positives = 211/423 (49%), Gaps = 17/423 (4%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQ-GVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           K D L  L  RG I+Q ++   L    ++   +  Y G D T  SLH GHL   M+L   
Sbjct: 3   KFDILEDLKWRGAINQETDEEGLRKYLAEHDDLALYCGTDPTGDSLHIGHLIPFMILKRF 62

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q  G+ P+ L+GGGT  IGDPS R   R +  + +++ N E +            G  + 
Sbjct: 63  QMAGYHPVILIGGGTGAIGDPSGRKTERTLQTADQVKHNEECLTNQMKKLF----GTENF 118

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            + NN  WL  +  ID LR+ G FF VN M++ E V SRL  E  +SF EF Y ILQA D
Sbjct: 119 EIRNNAEWLGKLNLIDFLRDYGKFFQVNNMINKEVVASRL--ENGISFTEFTYQILQAID 176

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTL 241
           F  L K+   +LQ+GGSDQWGNI  GIDL  +L+      F LT PL+  A GTK GK+ 
Sbjct: 177 FYHLNKDDGVQLQIGGSDQWGNITAGIDLIHKLEGADRPAFGLTIPLMLKADGTKFGKSA 236

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAK 299
            GA+WL+ E TSPY F+Q+W N DD DVV + K  T L   EI+ +A+   KE     A+
Sbjct: 237 GGAVWLDPEKTSPYEFYQFWINQDDRDVVKYLKYFTFLSRKEIEDLAEKTEKEPWKRAAQ 296

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRGMGLL 353
           K +A E+T  VHG    ++A       F  +I +  +  I        S +  S    L+
Sbjct: 297 KRLAEEVTKFVHGEAGLKEAQMITDALFSGNIKNLSVTQIEQGLKNAPSAEAGSEKKNLV 356

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
             +V      S  +AR  +K+ AI +N     +    +          + +  GK+ + +
Sbjct: 357 DFLVDTKIEPSKRQAREDIKNGAIYVNGDREQSVDFDVDPSSAFDGKYVIIRKGKRKYTL 416

Query: 414 CHL 416
             +
Sbjct: 417 VTI 419


>gi|323699292|ref|ZP_08111204.1| tyrosyl-tRNA synthetase [Desulfovibrio sp. ND132]
 gi|323459224|gb|EGB15089.1| tyrosyl-tRNA synthetase [Desulfovibrio desulfuricans ND132]
          Length = 426

 Score =  468 bits (1206), Expect = e-130,   Method: Composition-based stats.
 Identities = 152/427 (35%), Positives = 233/427 (54%), Gaps = 24/427 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L  RG I+Q+S+  ++    S+   T Y G+D TA SLH G+L  L+ L  +++ 
Sbjct: 2   NIYDELKWRGLINQVSDEDKVRAYLSEPGATMYCGFDPTAESLHVGNLVPLLCLVRMKRA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P+ LMGG T  IGDPS +D+ R +  + ++ E +E IK     F++  TG+    ++
Sbjct: 62  GHHPLYLMGGATGRIGDPSGKDKERELSDADKLDERLEMIKHQVRRFVERNTGERP-NIV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL-KREQSLSFLEFNYMILQAYDFV 185
           NN  W   +  I+LLR++G  F++N ML  ESV+ R+ + E  +S+ EF+YMILQAYDF 
Sbjct: 121 NNYDWTKDMSCIELLRDVGKHFTINWMLQKESVKGRIGREETGISYTEFSYMILQAYDFY 180

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERL-----KTPKLFALTSPLLTTASGTKMGKT 240
            L KNYDCRLQ+GG DQWGNI  G +   R      ++ + FALT PL+TTASG K GK+
Sbjct: 181 HLYKNYDCRLQIGGGDQWGNITAGCEFIRRRYAVDGESAEAFALTFPLITTASGKKFGKS 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEA 298
              A++LN ++T+PY F+Q++ N DDADV+ F K  T L   +I  + K   +   +  A
Sbjct: 241 EGNAVYLNADLTTPYAFYQFFINTDDADVIKFLKLFTFLTPEQIAELEKQTEEAPHLRAA 300

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHS-----------QHMPTISISKDEVS 347
           +K +A E+TTM+HG+ E E+   A    F                 +  P +  +  +V 
Sbjct: 301 QKRLAEEVTTMIHGKHELERVLAATEALFGKGDIKAIDPGTLRAAFESAPAVRYAPGDVP 360

Query: 348 RGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFG 407
               L  ++V  G   S  + R+ +    + IN   + +   +I    F     + +  G
Sbjct: 361 ---DLPQMLVDLGLVKSKGQGRKDILGGGVYINGERVEDGD-EITDTQFIGGELLIIRKG 416

Query: 408 KKNHIIC 414
           KKN+ + 
Sbjct: 417 KKNYGLV 423


>gi|15232946|ref|NP_186915.1| emb2768 (EMBRYO DEFECTIVE 2768); ATP binding / RNA binding /
           aminoacyl-tRNA ligase/ nucleotide binding /
           tyrosine-tRNA ligase [Arabidopsis thaliana]
 gi|6957729|gb|AAF32473.1| putative tyrosyl-tRNA synthetase [Arabidopsis thaliana]
 gi|62320566|dbj|BAD95182.1| putative tyrosyl-tRNA synthetase [Arabidopsis thaliana]
 gi|117168055|gb|ABK32110.1| At3g02660 [Arabidopsis thaliana]
 gi|332640324|gb|AEE73845.1| tyrS tyrosyl-tRNA synthetase [Arabidopsis thaliana]
          Length = 511

 Score =  468 bits (1206), Expect = e-130,   Method: Composition-based stats.
 Identities = 150/434 (34%), Positives = 228/434 (52%), Gaps = 21/434 (4%)

Query: 3   AFKSDFLSILSERGFIHQISNPRELDILCSQG---VVTAYIGYDLTASSLHAGHLTQLML 59
            F+ + + IL ERG +  I++   L   CS      +  Y G+D TA SLH G+L  +++
Sbjct: 80  VFRPNVVDILEERGLLESITSEN-LRSACSDPKVAPLRVYCGFDPTAESLHLGNLLGIIV 138

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG 119
           L W Q+ GH+ + L+GG T  +GDPS +   R  + +  +++NI  I  I    +     
Sbjct: 139 LSWFQRCGHQAVGLIGGATGRVGDPSGKSLERPELDADTLEKNIAGITKIIIKILGSNPS 198

Query: 120 KTDAL-MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMI 178
              +  + NN  W   +  +D L ++G F  V  M++ ESV+ RL+ EQ +S+ EF Y +
Sbjct: 199 PGGSYVIFNNYDWWKDMTMLDFLNKVGRFARVGTMMAKESVKKRLESEQGMSYTEFTYQL 258

Query: 179 LQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK--LFALTSPLLTTASGTK 236
           LQAYDF+ L KN    +Q+GGSDQWGNI  G DL  ++   +   + LT PLL    GTK
Sbjct: 259 LQAYDFLHLFKNEGINVQIGGSDQWGNITAGTDLIRKILQAEEAAYGLTFPLLLKNDGTK 318

Query: 237 MGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGK 293
            GK+  GAIWL+  M SPY F+QY+ ++ D DV+ F K LT L + EI   +      G 
Sbjct: 319 FGKSEDGAIWLSPSMLSPYKFYQYFFSVPDVDVIRFLKTLTFLSLDEIKILEDQMSKPGY 378

Query: 294 EINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSI----------HSQHMPTISISK 343
             N A+  +A E+T  VHG E  ++A  A       +            ++ +P+ S+  
Sbjct: 379 VPNTAQIKLAEEVTRFVHGEEGLKEAIKATEALRPGAETKLDWNLIERIAEDIPSCSLPI 438

Query: 344 DEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
           D VS G+ ++ L V AG   S + ARR LK     +NN  + +E  ++  +D      + 
Sbjct: 439 DRVS-GLSIVDLSVSAGLFESKSAARRMLKQGGFYMNNERVDDENKRVDEEDIVEGRGLV 497

Query: 404 LSFGKKNHIICHLC 417
           LS GKKN ++  + 
Sbjct: 498 LSAGKKNKVVVRIS 511


>gi|149275976|ref|ZP_01882121.1| tyrosyl-tRNA synthetase [Pedobacter sp. BAL39]
 gi|149233404|gb|EDM38778.1| tyrosyl-tRNA synthetase [Pedobacter sp. BAL39]
          Length = 428

 Score =  468 bits (1206), Expect = e-130,   Method: Composition-based stats.
 Identities = 137/426 (32%), Positives = 222/426 (52%), Gaps = 19/426 (4%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           ++F+  L  RG +  +    E     ++G+ + YIG+D TA SLH GHLTQ+M L   Q+
Sbjct: 2   TNFVEELRWRGMLQDMMPGTE--EKLNEGMTSGYIGFDPTADSLHVGHLTQIMTLIHFQR 59

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP +L+GG T ++GDPS + + R +   + +  N+  +K   S F+ + + +  A+M
Sbjct: 60  AGHKPYALVGGATGMVGDPSGKSDERNLQTEEMVAHNLAGMKRQLSKFLTFNSEENGAVM 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  W   +     +R++G   +VN M++ +SV+ RL+ +  LSF EF Y ++Q YDF 
Sbjct: 120 VNNADWFKDMSLFTFIRDVGKHITVNYMMAKDSVKRRLEGDSGLSFTEFCYQLIQGYDFY 179

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L KN +C +QMGGSDQWGNI+ G +L  R      FA+T+ L+  A GTK GKT SGA+
Sbjct: 180 YLWKNNNCLVQMGGSDQWGNIVTGTELIRRKDAGTAFAITTQLIKKADGTKFGKTESGAV 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIA 303
           WL+ E TSPY F+Q+W N  D D   + +  T     EI+       +   +   +K +A
Sbjct: 240 WLDPEKTSPYKFYQFWLNASDDDTKKWIRIFTLKTQEEIEILEQQHNEAPHLRILQKALA 299

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDEVSRG 349
            +IT   H  E  E A   +   F                    + +P   I+K+E++ G
Sbjct: 300 EDITVRTHSAEALETAIKTSEFLFGNGSLEFFNTLTEAQVLEIFEGIPQYLIAKEELTAG 359

Query: 350 MGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGK 408
           +   T++ +      S  EA++ ++   + +N   I      + + D  +   + +  GK
Sbjct: 360 IDAATILAEKTSVFPSKGEAKKTIQGGGVSLNKEKIKEASQLVSVADLLNDQFLIVQKGK 419

Query: 409 KNHIIC 414
           KN+ + 
Sbjct: 420 KNYFLL 425


>gi|256848567|ref|ZP_05554008.1| tyrosyl-tRNA synthetase [Lactobacillus coleohominis 101-4-CHN]
 gi|256714619|gb|EEU29599.1| tyrosyl-tRNA synthetase [Lactobacillus coleohominis 101-4-CHN]
          Length = 417

 Score =  468 bits (1205), Expect = e-130,   Method: Composition-based stats.
 Identities = 151/425 (35%), Positives = 228/425 (53%), Gaps = 24/425 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG ++Q+++   L  L ++  ++ Y G D T  SLH GHL   M+L   Q  
Sbjct: 2   NIVDELKWRGAVNQVTDEDGLRELTNEKQISLYCGTDPTGDSLHIGHLIPFMMLKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P+ ++GGGT  IGDPS R   R +    +++ N + +            G  +  ++
Sbjct: 62  GHHPVIIIGGGTGAIGDPSGRKTERTLQTESQLEHNKKALTEQMKKLF----GTENFTIV 117

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           +N TWL  I  I+ LR+ G  F+VN ML+ E V SRL     +SF EF Y ILQA DF+ 
Sbjct: 118 DNYTWLSKISMIEFLRDYGKLFNVNTMLNKEVVASRLDN--GISFTEFTYQILQAVDFLH 175

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSGA 244
           L +N D +LQ+GGSDQWGNI  GIDL  +++ P  K+F LT PL+  A GTK GKT  GA
Sbjct: 176 LYRNNDVQLQIGGSDQWGNITSGIDLIHKVEGPETKVFGLTIPLMLKADGTKFGKTAGGA 235

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKII 302
           +WL+ + TSPY F+Q+W N DD DVV + K  T L   +I+ +A+   KE    EA++ +
Sbjct: 236 VWLDPKKTSPYEFYQFWLNQDDRDVVKYLKYFTFLDQDQINDLAEKVEKEPWKREAQRTL 295

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGL 352
           A E+TT VHG    + A   +   F   I            +  P++ IS D V+    +
Sbjct: 296 AREVTTFVHGEAATKHAEEISQLLFKGDIKDLTTEDIEQAFKSAPSVDISADVVN----I 351

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           +  +V      S  +AR  +K+ AI +N   +++ + +I   D      + +  GKK++ 
Sbjct: 352 VDWLVNTNIEPSKRQAREDVKNGAITVNGEKVTDIEAEINPADHFDGKYVVVRRGKKHYT 411

Query: 413 ICHLC 417
           +  + 
Sbjct: 412 LAKVT 416


>gi|237738790|ref|ZP_04569271.1| tyrosyl-tRNA synthetase [Fusobacterium sp. 2_1_31]
 gi|294781946|ref|ZP_06747278.1| tyrosine--tRNA ligase [Fusobacterium sp. 1_1_41FAA]
 gi|229423893|gb|EEO38940.1| tyrosyl-tRNA synthetase [Fusobacterium sp. 2_1_31]
 gi|294481757|gb|EFG29526.1| tyrosine--tRNA ligase [Fusobacterium sp. 1_1_41FAA]
          Length = 406

 Score =  468 bits (1205), Expect = e-130,   Method: Composition-based stats.
 Identities = 169/394 (42%), Positives = 243/394 (61%), Gaps = 6/394 (1%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M    ++   +L ERG++ Q+++  E+  L  +  VT YIG+D TA SLH GH   +M +
Sbjct: 1   MEEKMANVYDVLKERGYLKQLTHEEEIKELLEKEKVTFYIGFDPTADSLHVGHFIAMMFM 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             +Q+ GH+PI+L GGGT +IGDPS R + R MM  + I  N+E IK     FI +  GK
Sbjct: 61  AHMQQHGHRPIALAGGGTGMIGDPSGRSDMRTMMTVETIDHNVECIKKQMQKFIDFSDGK 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
             A++ NN  WL ++ YI+ LR+IG  FSVNRML+ E  +SR+  E  LSFLEFNYMI+Q
Sbjct: 121 --AILENNANWLRNLNYIEFLRDIGEHFSVNRMLAAECYKSRM--ENGLSFLEFNYMIMQ 176

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
            YDF  L K Y+C +Q+GG DQW N+I G++L  R    + +A+T  LLT + G KMGKT
Sbjct: 177 GYDFYVLNKKYNCTMQLGGDDQWSNMIAGVELIRRKDRRQAYAMTCTLLTNSEGKKMGKT 236

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
             GA+WL+ + T+PY F+QYWRNIDD DV +    LT LPM E+ R+  L+   INEAKK
Sbjct: 237 AKGALWLDPKKTTPYEFYQYWRNIDDQDVENCLALLTFLPMDEVRRLGALKDAAINEAKK 296

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           ++A E+T ++HG EEA KA  A    F    +  + P I +  ++ S+   LL ++V   
Sbjct: 297 VLAYEVTKIIHGEEEATKAKEATEALFGSGNNLDNAPKIELGAEDFSKE--LLDVLVDRK 354

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
              + +E RR ++ N + +N+  I++ K  +   
Sbjct: 355 ILKTKSEGRRLIEQNGMSLNDEKITDVKFTLNEN 388


>gi|148543387|ref|YP_001270757.1| tyrosyl-tRNA synthetase [Lactobacillus reuteri DSM 20016]
 gi|254783612|sp|A5VHU6|SYY_LACRD RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|148530421|gb|ABQ82420.1| tyrosyl-tRNA synthetase [Lactobacillus reuteri DSM 20016]
          Length = 416

 Score =  468 bits (1205), Expect = e-130,   Method: Composition-based stats.
 Identities = 154/420 (36%), Positives = 226/420 (53%), Gaps = 16/420 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D L+ L  RG I+Q+++   L  L S+  +  Y G D T  SLH GHL   M+L   Q  
Sbjct: 2   DILNELEWRGAINQVTDEEGLRKLTSEDKIALYCGTDPTGDSLHIGHLIPFMILKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P+ ++GGGT  IGDPS R   R++    ++  N E +            G  +  ++
Sbjct: 62  GHHPVIIIGGGTGAIGDPSGRKSERQLQTMDQVHHNEEALTAQMKKLF----GTENFTIV 117

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  I  +D LR+ G  F++N ML+ E V SRL     +SF EF Y ILQ+ DF+ 
Sbjct: 118 NNYEWLSKISLLDFLRDYGKLFNINTMLNKEVVASRLDA--GISFTEFTYQILQSVDFLH 175

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSGA 244
           L ++ D +LQ+GGSDQWGNI  GIDL  +++ P  K++ LT PL+  A GTK GKT  GA
Sbjct: 176 LYRHNDVQLQIGGSDQWGNITAGIDLIHKVEGPDTKVYGLTIPLMLKADGTKFGKTAGGA 235

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKII 302
           IWL+ E TSPY F+Q+W N DD DV+ + K  T L   EID +A+   KE    EA++ +
Sbjct: 236 IWLDPEKTSPYEFYQFWINQDDRDVIKYLKYFTFLSKEEIDDLAEKVEKEPWKREAQRRL 295

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRGMGLLTLI 356
           A E+T  VHG+E  E+A   +   F   +    +  I        S D  ++   ++  +
Sbjct: 296 AQEVTKFVHGQEAVEEAERISKALFSGDVADLSVAEIEQGFKNMPSVDVENKKENIIIWL 355

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
              G   S  +AR+ + S AI+IN   + +   +I  Q   +   + +  GKK++ +  +
Sbjct: 356 TDNGIEPSRRQARQDVSSGAIRINGEKVDDVDAEIDPQAHFAGKFVIVRKGKKHYYLARV 415


>gi|58336534|ref|YP_193119.1| Tyr-tRNA synthetase [Lactobacillus acidophilus NCFM]
 gi|227903085|ref|ZP_04020890.1| Tyr-tRNA synthetase [Lactobacillus acidophilus ATCC 4796]
 gi|75358125|sp|Q5FMI6|SYY_LACAC RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|58253851|gb|AAV42088.1| tyr-tRNA synthetase [Lactobacillus acidophilus NCFM]
 gi|227869164|gb|EEJ76585.1| Tyr-tRNA synthetase [Lactobacillus acidophilus ATCC 4796]
          Length = 420

 Score =  468 bits (1205), Expect = e-130,   Method: Composition-based stats.
 Identities = 148/423 (34%), Positives = 212/423 (50%), Gaps = 17/423 (4%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQ-GVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           K D L  L  RG I+Q ++   L    ++   +  Y G D T  SLH GHL   M+L   
Sbjct: 3   KFDILEDLKWRGAINQETDEEGLRKYLAEHDDLALYCGTDPTGDSLHIGHLIPFMILKRF 62

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q  G+ P+ L+GGGT  IGDPS R   R +  +++++ N E +            G  + 
Sbjct: 63  QMAGYHPVILIGGGTGAIGDPSGRTTERVLQTAEQVKHNEESLTNQMKKLF----GTENF 118

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            + NN  WL  I  ID LR+ G +F VN M++ + V SRL  E  +SF EF Y ILQA D
Sbjct: 119 EIRNNAEWLGKINLIDFLRDYGKYFQVNNMINKDVVASRL--ENGISFTEFTYQILQAID 176

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKLFALTSPLLTTASGTKMGKTL 241
           F  L K+   +LQ+GG DQWGNI  GIDL  +L+      F LT PL+  A GTK GK+ 
Sbjct: 177 FYHLNKDDGVQLQIGGGDQWGNITAGIDLIHKLEGSDRPAFGLTIPLMLKADGTKFGKSA 236

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAK 299
            GA+WL+ E TSPY F+Q+W N DD DVV + K  T L   EI+ +A+   KE     A+
Sbjct: 237 GGAVWLDPEKTSPYEFYQFWINQDDRDVVKYLKYFTFLSHEEIEDLAEKTEKEPWKRAAQ 296

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRGMGLL 353
           K +A E+T  VHG E  ++A       F   I +  +  I        S +  S    ++
Sbjct: 297 KKLAEEVTKFVHGEEGLKEAQMITDALFSGDIKNLSVTQIEQGLKNAPSAEAGSEKKNIV 356

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
             +V      S  +AR  +K+ AI +N     +   ++          + +  GK+ + +
Sbjct: 357 DFLVDTKIEPSKRQAREDVKNGAIYVNGDREQSVDFEVDPSSAFDGKYVIIRKGKRKYTL 416

Query: 414 CHL 416
             +
Sbjct: 417 VTI 419


>gi|313904038|ref|ZP_07837418.1| tyrosyl-tRNA synthetase [Eubacterium cellulosolvens 6]
 gi|313471187|gb|EFR66509.1| tyrosyl-tRNA synthetase [Eubacterium cellulosolvens 6]
          Length = 410

 Score =  468 bits (1205), Expect = e-130,   Method: Composition-based stats.
 Identities = 164/399 (41%), Positives = 249/399 (62%), Gaps = 7/399 (1%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG + Q+++ +E+  L + G  T YIG+D TA SLH GH   L+L+  LQ  G
Sbjct: 3   LYEELQARGLLAQLTDEKEIAELINAGKATFYIGFDPTADSLHVGHFMALLLMKRLQAAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           +KPI+L+GGGT++IGDPS R + R+MM  + I  N+E  K   S FI +G  K  ALM+N
Sbjct: 63  NKPIALVGGGTAMIGDPSGRSDMRQMMTVETIDHNVECFKKQMSRFIDFGPDK--ALMVN 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  + ++D +R+ GS F+VN ML      +R+  ++ LSFLEF+YM++Q+YDF  L
Sbjct: 121 NGDWLRDLNFLDFMRDYGSQFNVNEMLRARCYVNRM--QEGLSFLEFSYMLMQSYDFYRL 178

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
             +Y C++Q GG DQW N++ GI+L  +      +A+T  LL    GTKMGKT  GA+WL
Sbjct: 179 YHDYGCQMQFGGDDQWSNMLGGINLIRKKDQKDAYAMTISLLLKHDGTKMGKTAGGAVWL 238

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           + +  SPY+F+QYWRN+DD+DV+ F + +T LP+ +ID M K +G ++N AK+I+A E+T
Sbjct: 239 DPDKYSPYDFYQYWRNVDDSDVLKFLRMMTFLPLEQIDEMDKWEGAQLNTAKEILAHELT 298

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG--MGLLTLIVKAGFATST 365
           T+VHG +EA KA   A   F  S    ++P++ +  ++ +    + +L+++VK     S 
Sbjct: 299 TLVHGEDEAVKAEAGAKAVFLGSGSLDNVPSVELEAEDFNENDEIDILSVLVKTAQCASR 358

Query: 366 NEARRHL-KSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
           +EARR + K ++I I  + I +    IK  D  + G + 
Sbjct: 359 SEARRAVTKDHSISIGENKIDDFAYAIKKADIPAEGLLI 397


>gi|303281116|ref|XP_003059850.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226458505|gb|EEH55802.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 430

 Score =  468 bits (1205), Expect = e-130,   Method: Composition-based stats.
 Identities = 149/431 (34%), Positives = 226/431 (52%), Gaps = 23/431 (5%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            + +L ERG +   +N  EL      G ++ Y G+D TA SLH G+L  +++L W Q+ G
Sbjct: 1   VVDVLRERGLLDACTNEDELREAAGDGSLSVYCGFDPTADSLHLGNLLGIVVLAWFQRCG 60

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFS-------SFIKYGTGK 120
           H PI+L+GG T  +GDPS +   R ++    I  N+  I+ I         SF   G   
Sbjct: 61  HTPIALLGGATGRVGDPSGKSAERPVLDDVTINANVAGIEKILRGVLANSASFAPPGDEL 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
             A +LNN  W   + +++ LR++G +  V  M++ +SV+SRL+ E+ +SF EF+Y +LQ
Sbjct: 121 KPARVLNNLDWFGGMGFLEFLRDVGKYARVGTMVAKDSVKSRLESERGMSFTEFSYQLLQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK--LFALTSPLLTTASGTKMG 238
            YDFV L +  +  +Q+GGSDQWGNI  G DL  R+       + LT PLL  A G K G
Sbjct: 181 GYDFVHLHREENVMVQVGGSDQWGNITAGTDLIRRISQRDGGAYGLTFPLLLKADGKKFG 240

Query: 239 KTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEI 295
           K+  GA+WL+ +  SPY F+Q+     DADVV F K LT +P+ EI+ M    K  G   
Sbjct: 241 KSEDGAVWLSPDRLSPYKFYQHLLQSTDADVVRFMKTLTFVPIEEIEAMEAAMKEDGYAP 300

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECF----------DMSIHSQHMPTISISKDE 345
           N A+K +A E+T  VHG     +A  A                +   +  +P+  +S  E
Sbjct: 301 NTAQKRLAEEVTRFVHGEAGLSQALKATEGLKPGADTVLDADTLEALAGDIPSAELSLGE 360

Query: 346 VSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLS 405
           V  G  ++ ++   G   S  EA+R +K    ++NN  + +E   I+  D      + L+
Sbjct: 361 VV-GRTVVDVMAATGLQKSKGEAKRLIKGGGARVNNVKVEDEGKVIEEGDVVDGRVLLLA 419

Query: 406 FGKKNHIICHL 416
            GKKN ++  +
Sbjct: 420 AGKKNKLLVRV 430


>gi|300725862|ref|ZP_07059326.1| tyrosine--tRNA ligase [Prevotella bryantii B14]
 gi|299776850|gb|EFI73396.1| tyrosine--tRNA ligase [Prevotella bryantii B14]
          Length = 432

 Score =  468 bits (1205), Expect = e-130,   Method: Composition-based stats.
 Identities = 142/434 (32%), Positives = 225/434 (51%), Gaps = 27/434 (6%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
            +F+  L  RG + QI    E      + + +AY+G D TA SLH GHL  +M+L  LQ+
Sbjct: 2   KNFVEELKWRGMLAQIMPGTE--EYLMENMTSAYLGTDPTADSLHIGHLCGIMMLRHLQR 59

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG-TGKTDAL 124
            GHKP  L+GG T +IGDPS + + R ++ ++ +  N E IK   S F+ +  T    A 
Sbjct: 60  CGHKPYLLVGGATGMIGDPSGKSQERNLLDTETLYHNQEAIKKQVSKFLDFDGTAPNKAE 119

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK--REQSLSFLEFNYMILQAY 182
           M+NN  W+    ++D  RE+G   +VN M++ +SV+ RL       LSF EF Y +LQ Y
Sbjct: 120 MVNNYDWMKDFTFLDFAREVGKHITVNYMMAKDSVQQRLNGTARDGLSFTEFTYQLLQGY 179

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKLFALTSPLLTTASGTKMGKT 240
           DF+   +NY  RLQ+GG+DQWGN+  G +L  R      + F LT PL+T A G K GKT
Sbjct: 180 DFLYQYQNYGVRLQLGGNDQWGNMTTGTELIRRTLGSEAQAFCLTCPLITKADGKKFGKT 239

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEA 298
            SG +WL++  T+PY F+Q+W N+ D D   + K  T L    I+ + +   ++      
Sbjct: 240 ESGNVWLDRNRTTPYAFYQFWLNVTDDDAERYIKIFTDLDQDTINALVEEHKQDPGRRTL 299

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKD 344
           ++ +A E+TTMVH +E+ + A  A+   F  +                 + +P  +I K 
Sbjct: 300 QRRLAEEVTTMVHSKEDLDMAIAASNILFGKATKDSLAQLDEATLNDVFKDVPHYTIDKS 359

Query: 345 EVSRGMGLLTLIVKAG--FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNI 402
           ++  G   + L  + G     S +E R+ +K   + +N   ++     +  +D      +
Sbjct: 360 QL--GGTAVDLFNQEGMDIFPSKSEMRKLVKGGGVSLNKEKLTAFDQAVTAEDLIDGKYL 417

Query: 403 KLSFGKKNHIICHL 416
            +  GKKN+ +  +
Sbjct: 418 LVQRGKKNYYLITV 431


>gi|184152797|ref|YP_001841138.1| tyrosyl-tRNA synthase [Lactobacillus reuteri JCM 1112]
 gi|227364462|ref|ZP_03848552.1| tyrosine--tRNA ligase [Lactobacillus reuteri MM2-3]
 gi|325683661|ref|ZP_08163177.1| tyrosine--tRNA ligase [Lactobacillus reuteri MM4-1A]
 gi|183224141|dbj|BAG24658.1| tyrosyl-tRNA synthase [Lactobacillus reuteri JCM 1112]
 gi|227070555|gb|EEI08888.1| tyrosine--tRNA ligase [Lactobacillus reuteri MM2-3]
 gi|324978011|gb|EGC14962.1| tyrosine--tRNA ligase [Lactobacillus reuteri MM4-1A]
          Length = 420

 Score =  468 bits (1205), Expect = e-130,   Method: Composition-based stats.
 Identities = 154/420 (36%), Positives = 226/420 (53%), Gaps = 16/420 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D L+ L  RG I+Q+++   L  L S+  +  Y G D T  SLH GHL   M+L   Q  
Sbjct: 6   DILNELEWRGAINQVTDEEGLRKLTSEDKIALYCGTDPTGDSLHIGHLIPFMILKRFQLA 65

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P+ ++GGGT  IGDPS R   R++    ++  N E +            G  +  ++
Sbjct: 66  GHHPVIIIGGGTGAIGDPSGRKSERQLQTMDQVHHNEEALTAQMKKLF----GTENFTIV 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  I  +D LR+ G  F++N ML+ E V SRL     +SF EF Y ILQ+ DF+ 
Sbjct: 122 NNYEWLSKISLLDFLRDYGKLFNINTMLNKEVVASRLDA--GISFTEFTYQILQSVDFLH 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSGA 244
           L ++ D +LQ+GGSDQWGNI  GIDL  +++ P  K++ LT PL+  A GTK GKT  GA
Sbjct: 180 LYRHNDVQLQIGGSDQWGNITAGIDLIHKVEGPDTKVYGLTIPLMLKADGTKFGKTAGGA 239

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKII 302
           IWL+ E TSPY F+Q+W N DD DV+ + K  T L   EID +A+   KE    EA++ +
Sbjct: 240 IWLDPEKTSPYEFYQFWINQDDRDVIKYLKYFTFLSKEEIDDLAEKVEKEPWKREAQRRL 299

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRGMGLLTLI 356
           A E+T  VHG+E  E+A   +   F   +    +  I        S D  ++   ++  +
Sbjct: 300 AQEVTKFVHGQEAVEEAERISKALFSGDVADLSVAEIEQGFKNMPSVDVENKKENIIIWL 359

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
              G   S  +AR+ + S AI+IN   + +   +I  Q   +   + +  GKK++ +  +
Sbjct: 360 TDNGIEPSRRQARQDVSSGAIRINGEKVDDVDAEIDPQAHFAGKFVIVRKGKKHYYLARV 419


>gi|315604494|ref|ZP_07879558.1| tyrosine--tRNA ligase [Actinomyces sp. oral taxon 180 str. F0310]
 gi|315313778|gb|EFU61831.1| tyrosine--tRNA ligase [Actinomyces sp. oral taxon 180 str. F0310]
          Length = 420

 Score =  468 bits (1205), Expect = e-130,   Method: Composition-based stats.
 Identities = 142/424 (33%), Positives = 224/424 (52%), Gaps = 19/424 (4%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +D L  L  RG + Q ++   L    + G VT Y GYD TA SLH GHL QL+++  LQ 
Sbjct: 2   TDILDDLQWRGLLAQHTDLEALRAHLASGPVTFYCGYDPTAPSLHHGHLVQLIVMRHLQL 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+P++L+GG T  IGDP    E R++  +  +Q   ++++   S F+ +  G   A M
Sbjct: 62  AGHRPLALVGGATGQIGDPRQSGE-RQLQPTDVVQGWADRLRAQISRFLDF-EGPAAAQM 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  W   +  IDLLR IG +F V  ML  + V  R+  ++ +S+ EF+Y +LQA DF+
Sbjct: 120 VNNLDWTEQMSAIDLLRTIGKYFRVGTMLGKDIVARRIASDEGISYTEFSYQVLQANDFL 179

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           EL +   C L+ GG+DQWGN++ G+DL  +++  +   +T+P++T A GTK GK+  GAI
Sbjct: 180 ELFRREGCTLETGGNDQWGNMVGGVDLIRKVEGAETHVMTTPIITKADGTKFGKSEGGAI 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIA 303
           WL+ EM +PY F+Q+W  + D DVV F K  T +   EI+ +A    +      A+K +A
Sbjct: 240 WLDPEMMTPYAFYQFWLQVADEDVVRFLKIFTFMSREEIEALAVEVAERPHQRAAQKALA 299

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIH-----------SQHMPTISISKDEVSRGMGL 352
             +T +VHG ++ ++   A    +                +  +P  S+S  E      +
Sbjct: 300 ASVTELVHGADQLKRVLAATQALWGGGDIRDLDAATLAAATADLPRASLSLGE----ATV 355

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           +  +V  GF      ARR + S    +NN  + +    +   D  + G   +  G+KN  
Sbjct: 356 VDALVALGFEKGKTAARRTIASGGASVNNVKVEDPDTLLNASDVLAGGLALIRKGRKNLA 415

Query: 413 ICHL 416
           +  L
Sbjct: 416 VLEL 419


>gi|227498531|ref|ZP_03928675.1| tyrosyl-tRNA synthetase [Acidaminococcus sp. D21]
 gi|226903987|gb|EEH89905.1| tyrosyl-tRNA synthetase [Acidaminococcus sp. D21]
          Length = 408

 Score =  468 bits (1205), Expect = e-130,   Method: Composition-based stats.
 Identities = 173/409 (42%), Positives = 248/409 (60%), Gaps = 4/409 (0%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            +  L ERG++ Q+S+  E+  L  +  +T YIG+D TA SLH GH   LM++  +Q+ G
Sbjct: 3   VIDTLKERGYLKQLSHEEEIKELLEKEKITFYIGFDPTADSLHVGHFIALMVMAHMQRAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+PI LMGGGT +IGDPS ++E R+M+  + I  N+E  K     FI    GK  A++ +
Sbjct: 63  HRPIILMGGGTGMIGDPSGKNEMRKMLTPEFIHHNVECFKKQVGRFIDLSDGK--AIVAD 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  + YI  LRE+G  FSVNRML  E  ++RL  E  LSF E NYMI+QAYDF  L
Sbjct: 121 NANWLLGLNYIKFLREVGVHFSVNRMLGAECYKNRLASENGLSFFEMNYMIMQAYDFYVL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            K Y+C +++GG DQW N+I G++L  R      F +T+ LLT + G KMGKT+ GA+WL
Sbjct: 181 HKKYNCVMELGGDDQWSNMIAGVELIRRKDRQPAFCMTNTLLTNSQGQKMGKTVGGAVWL 240

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           + E TSP++F+QYWRN+DDADV      LT LPM E+ R+  L+G +INEAK  +A E+T
Sbjct: 241 SAEKTSPFDFYQYWRNVDDADVEKCLALLTFLPMDEVRRLGALEGSKINEAKVTLAYEVT 300

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
            +VHG+EEA+KA  AA   F       + P + +S+ +   G  LL L+  A    S +E
Sbjct: 301 KLVHGKEEADKAKAAAEALFGAGGDMGNAPVVEVSRAQF--GSPLLDLLFDAKIIASKSE 358

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            RR ++ N + + ++ +++    +    F+    + L  GKK +    L
Sbjct: 359 GRRLIQQNGLTVGDTKVTDVAAALSETLFEGKTEVLLRKGKKKYYRLIL 407


>gi|325954724|ref|YP_004238384.1| Tyrosyl-tRNA synthetase [Weeksella virosa DSM 16922]
 gi|323437342|gb|ADX67806.1| Tyrosyl-tRNA synthetase [Weeksella virosa DSM 16922]
          Length = 432

 Score =  468 bits (1204), Expect = e-130,   Method: Composition-based stats.
 Identities = 152/430 (35%), Positives = 236/430 (54%), Gaps = 24/430 (5%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            +  L+ RG IH I          ++ + T Y+G+D TA SLH G L  + LL  LQ+ G
Sbjct: 5   LIEELTWRGLIHNIMPGTA--EQLNKEMTTGYVGFDPTADSLHVGSLVPIFLLVHLQRHG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG-TGKTDALML 126
           H+P++L+GG T +IGDP+ +   R ++  + +++ +  IK   + F+ +       A+++
Sbjct: 63  HRPVALVGGATGMIGDPTGKSAERNLLDEETLEKYVNGIKAQLARFLDFDGRNGNSAILV 122

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL--KREQSLSFLEFNYMILQAYDF 184
           NN  W+    +ID +R +G   +VN M++ +SV+SRL  +    +SF EF Y ++Q YD+
Sbjct: 123 NNYDWMKDFSFIDFVRNVGKHLTVNYMMAKDSVKSRLSAESNVGMSFTEFTYQLIQGYDY 182

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG- 243
           + L +    +LQMGGSDQWGNI  G +L  R    + FA T PL T A GTK GK+  G 
Sbjct: 183 LYLYEKLGVKLQMGGSDQWGNITTGTELIRRTIQGEAFAFTCPLTTKADGTKFGKSEGGE 242

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKI 301
            IWL+K+ TSPY F+Q+W N  DAD   + K  T L    ID + +   KE    E ++ 
Sbjct: 243 NIWLDKKRTSPYKFYQFWLNQADADCEKYIKIYTFLDKETIDDLIEHHRKEPHLRELQRK 302

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDEVS 347
           +ATEIT MVHG +E  KA  A+   F  S                 + +P   I+K+++ 
Sbjct: 303 LATEITIMVHGVDELHKAEKASQMLFGKSTSEDLKSLDTDTFLSVFEGVPQAIITKEDLE 362

Query: 348 RGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+ ++ ++V+ +GF  S +EARR L +NAI +N   I++E   +      +   + L  
Sbjct: 363 NGLAIVDVLVEKSGFLKSNSEARRELATNAISVNKEKITDE-FILDTSHLINDKYVLLQK 421

Query: 407 GKKNHIICHL 416
           GKKN+ I  +
Sbjct: 422 GKKNYFILLV 431


>gi|238926803|ref|ZP_04658563.1| tyrosine--tRNA ligase [Selenomonas flueggei ATCC 43531]
 gi|238885335|gb|EEQ48973.1| tyrosine--tRNA ligase [Selenomonas flueggei ATCC 43531]
          Length = 400

 Score =  468 bits (1204), Expect = e-130,   Method: Composition-based stats.
 Identities = 173/390 (44%), Positives = 251/390 (64%), Gaps = 10/390 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + + IL ERGF+ Q ++   L  L     VT Y G+D TA SLHAGHL  LM +  +Q+ 
Sbjct: 2   NAVDILKERGFLAQCTDEAALRNLLDHEQVTFYTGFDPTADSLHAGHLIALMAMSHMQRA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI L+GGGT  +GDPS R + R++M  + I  N +  +   S FI +  G+  A+M+
Sbjct: 62  GHRPICLVGGGTGTVGDPSGRTDMRKVMTDETIAHNCDCFRAQISHFIDFTDGR--AIMV 119

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           +N  WL  + YIDLLR++G+ F+VNRML+ ES + R   E+ L+FLEFNYMI+QAYDF+E
Sbjct: 120 DNGDWLRKLNYIDLLRDVGAHFTVNRMLAAESYKQR--WEKGLTFLEFNYMIMQAYDFLE 177

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + Y CRL+MGG DQW NII G++L  R K   +F LT+ LLT + G KMGKT  GA+W
Sbjct: 178 LNRRYGCRLEMGGDDQWSNIIAGVELCRRKKNITVFGLTNKLLTKSDGKKMGKTAGGALW 237

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           L+ + TSPY+F+QYWRN+DD DV +    LT LPM E+ R+  ++GKE+N +K+++A E+
Sbjct: 238 LDPKKTSPYDFYQYWRNVDDTDVSTCLSLLTFLPMEEVHRLTAVEGKEMNHSKEVLAYEV 297

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
           T +VHG +EA KA   A   F   + S+ +P + ++  E      L+  + + G  +S  
Sbjct: 298 TKIVHGEQEAHKAQEMARALFGGGV-SEQVPQLHVTCGE-----KLIDALTREGVFSSKG 351

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDF 396
           EARR ++   + +N + IS+E   ++  DF
Sbjct: 352 EARRLIQQGGVTLNETRISDEHYVLQEDDF 381


>gi|304382219|ref|ZP_07364726.1| tyrosine--tRNA ligase [Prevotella marshii DSM 16973]
 gi|304336576|gb|EFM02805.1| tyrosine--tRNA ligase [Prevotella marshii DSM 16973]
          Length = 432

 Score =  468 bits (1204), Expect = e-129,   Method: Composition-based stats.
 Identities = 145/433 (33%), Positives = 224/433 (51%), Gaps = 26/433 (6%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
            +F+  L  RG + QI    E   L  +  VTAY+G D TA SLH GHL  +M+L  LQ+
Sbjct: 3   KNFVEELKWRGMLAQIMPGTE--ELLQKETVTAYLGTDPTADSLHIGHLCGIMMLRHLQR 60

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG-TGKTDAL 124
            GHKPI L+GG T +IGDPS + + R ++ +  +  N E IK   + F+ +  T    A 
Sbjct: 61  CGHKPIILVGGATGMIGDPSGKSQERNLLDADTLYHNQECIKTQVAKFLDFDGTADNRAE 120

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQAY 182
           M+NN  W+    ++D  R +G   +VN M++ +SV+ RL  E    LSF EF Y +LQ Y
Sbjct: 121 MVNNYEWMKDFSFLDFARTVGKHITVNYMMAKDSVQKRLNGEARDGLSFTEFTYQLLQGY 180

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKLFALTSPLLTTASGTKMGKT 240
           DF+ L +   C+LQ+GG+DQWGN+  G +L  R      + +ALT PL+T A G K GKT
Sbjct: 181 DFLHLYREKGCKLQLGGNDQWGNMTTGTELIRRTLGTEAEAYALTCPLITKADGNKFGKT 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEA 298
            SG +WL+   TSPY F+Q+W N+ D D   + K  T+L    ID +     ++      
Sbjct: 241 ESGNVWLDPVRTSPYAFYQFWLNVTDDDAERYIKIFTSLEQEVIDTLIADHRQDPGRRTL 300

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKD 344
           ++ +A E+TTMVH  E    A  A+   F  +                 + +P  ++  D
Sbjct: 301 QRRLAEEVTTMVHSPEALAMAVEASNILFGKATKESLLKLNEQTLLDVFEGVPHFTLPAD 360

Query: 345 EVSRGMGLLTLI-VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
           ++  G+    L   +    TS  E R+ ++   + +N   + + +  +  QD  +   + 
Sbjct: 361 KL--GLSAGELFTTEIPIFTSKGEMRKLVQGGGVSLNKEKLDSFEQPVTAQDLINGRYLL 418

Query: 404 LSFGKKNHIICHL 416
           +  GKKN+ +  +
Sbjct: 419 VQRGKKNYYLITV 431


>gi|332299494|ref|YP_004441415.1| Tyrosyl-tRNA synthetase [Porphyromonas asaccharolytica DSM 20707]
 gi|332176557|gb|AEE12247.1| Tyrosyl-tRNA synthetase [Porphyromonas asaccharolytica DSM 20707]
          Length = 436

 Score =  468 bits (1204), Expect = e-129,   Method: Composition-based stats.
 Identities = 154/434 (35%), Positives = 243/434 (55%), Gaps = 24/434 (5%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S  +S L  RG IH I    E     ++ + TAY+G+D TA SLH GHL  +M+L  LQ+
Sbjct: 4   SSLISELKARGMIHNIMPGTE--EQLTEHLTTAYVGFDPTADSLHIGHLVGVMMLRHLQR 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG-TGKTDAL 124
            GH+PI+L+GG T +IGDPS + + R ++    ++ N E I      F+ +       AL
Sbjct: 62  AGHRPIALLGGATGMIGDPSMKSQERNLLDMDTLRHNQECIGRQLGHFLDFESDAPNKAL 121

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR--EQSLSFLEFNYMILQAY 182
           +LNN  W+    +++ +R+IG   +VN M++ +SV+ RL+   E  LSF EF+Y +LQ Y
Sbjct: 122 LLNNYDWMKDYSFLNFIRDIGKHITVNYMMAKDSVKRRLEANAEAGLSFTEFSYQLLQGY 181

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           D++ L + Y CR+QMGGSDQWGNI  G +L  R++  + F +T PL+  A GTK GKT  
Sbjct: 182 DYLHLYREYGCRVQMGGSDQWGNITTGTELIRRIEGGEAFGVTCPLIKKADGTKFGKTEQ 241

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKK 300
           G +WL++  TSPY F Q+W N+ D D   F K  T++P+ EID + +   +  +E   + 
Sbjct: 242 GNVWLDRRYTSPYTFCQFWLNVSDEDAERFVKIFTSIPLEEIDSLIERHRQAPHERLLQH 301

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQ--------------HMPTISISKD-- 344
            +A ++T MVHGRE+ E++ +A    F  + H Q               +P  ++ +   
Sbjct: 302 TLAEQLTVMVHGREDYEQSMSAGQILFGNNTHDQLRQMSEELLKEVMAGVPNYNVGRTLL 361

Query: 345 EVSRGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
           E + G+ LL L+V+ A    S  E R+ + SN I +N   ++++   +   D  +   + 
Sbjct: 362 EQADGVKLLDLLVEHAPIFKSKGELRKLIASNGISLNKEKVADQDCVVTTDDLIAGKYLI 421

Query: 404 LSFGKKNHIICHLC 417
           +  GKKN+ +  + 
Sbjct: 422 VQRGKKNYYLITVS 435


>gi|229817939|ref|ZP_04448221.1| hypothetical protein BIFANG_03226 [Bifidobacterium angulatum DSM
           20098]
 gi|229784543|gb|EEP20657.1| hypothetical protein BIFANG_03226 [Bifidobacterium angulatum DSM
           20098]
          Length = 440

 Score =  467 bits (1203), Expect = e-129,   Method: Composition-based stats.
 Identities = 137/428 (32%), Positives = 214/428 (50%), Gaps = 20/428 (4%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S  L  L  RG + Q ++   L    +   +T Y G+D TA+SLH G+L QL+ +  LQ 
Sbjct: 13  SSLLEELQWRGLVSQSTDRERLAQALNGEPITYYCGFDPTAASLHIGNLVQLINMRHLQL 72

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH PI+L+GG T +IGDP    E R +     +    E++K      +    G      
Sbjct: 73  AGHHPIALVGGATGLIGDPRQSGE-RTLNPKDVVAGWAERLKKQIGGILD-TEGSNPVRF 130

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           ++N  W   +  ID LR++G  F +  ML+ ++V  RL  E+ +SF EF+Y +LQ  DF+
Sbjct: 131 VSNYDWTAQMSVIDFLRDVGKNFRLGTMLAKDTVARRLNSEEGISFTEFSYQVLQGNDFL 190

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L   Y C L++GGSDQWGN+  G+DL  +++   +   TSP++T A G K GK+   A+
Sbjct: 191 HLFDEYHCTLELGGSDQWGNLTSGLDLIHKVRGVDVNVFTSPIITDAQGKKFGKSEGNAV 250

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIA 303
           WL+  M SPY F+Q+W N  DA++ S  K  T LP SEI+R+ +         EA+K +A
Sbjct: 251 WLDATMLSPYKFYQFWINRPDAEMESLLKAFTFLPKSEIERLIEESKTNPGAREAQKTLA 310

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKD----------------EVS 347
            E+T+ VHG +  + A  A+   F        +   ++                   +  
Sbjct: 311 WEVTSFVHGEQATQAAIDASTALFGRGGDLNAIDEQTLESVLDGFKVAGENGEHVFPQSE 370

Query: 348 RGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFG 407
            G  ++     AG   S +EARR +KS  + +NN  + +++  +   DF +     +  G
Sbjct: 371 AGARVIDAAQAAGLFKSGSEARRAIKSGGVYLNNVRVEDDEAVLGESDFLAGRFALIRRG 430

Query: 408 KKNHIICH 415
           KK   +  
Sbjct: 431 KKALGVVE 438


>gi|313886844|ref|ZP_07820549.1| tyrosine--tRNA ligase [Porphyromonas asaccharolytica PR426713P-I]
 gi|312923734|gb|EFR34538.1| tyrosine--tRNA ligase [Porphyromonas asaccharolytica PR426713P-I]
          Length = 436

 Score =  467 bits (1203), Expect = e-129,   Method: Composition-based stats.
 Identities = 154/434 (35%), Positives = 243/434 (55%), Gaps = 24/434 (5%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S  +S L  RG IH I    E     ++ + TAY+G+D TA SLH GHL  +M+L  LQ+
Sbjct: 4   SSLISELKARGMIHNIMPGTE--EQLTEHLTTAYVGFDPTADSLHIGHLVGVMMLRHLQR 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG-TGKTDAL 124
            GH+PI+L+GG T +IGDPS + + R ++    ++ N E I      F+ +       AL
Sbjct: 62  AGHRPIALLGGATGMIGDPSMKSQERNLLDMDTLRHNQECIGRQLGHFLDFESDAPNKAL 121

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR--EQSLSFLEFNYMILQAY 182
           +LNN  W+    +++ +R+IG   +VN M++ +SV+ RL+   E  LSF EF+Y +LQ Y
Sbjct: 122 LLNNYDWMKDYSFLNFIRDIGKHITVNYMMAKDSVKRRLEANAEAGLSFTEFSYQLLQGY 181

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           D++ L + Y CR+QMGGSDQWGNI  G +L  R++  + F +T PL+  A GTK GKT  
Sbjct: 182 DYLHLYREYGCRVQMGGSDQWGNITTGTELIRRIEGGEAFGVTCPLIKKADGTKFGKTEQ 241

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKK 300
           G +WL++  TSPY F Q+W N+ D D   F K  T++P+ EID + +   +  +E   + 
Sbjct: 242 GNVWLDRRYTSPYTFCQFWLNVSDEDAERFVKIFTSIPLEEIDSLIERHRQAPHERLLQH 301

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQ--------------HMPTISISKD-- 344
            +A ++T MVHGRE+ E++ +A    F  + H Q               +P  ++ +   
Sbjct: 302 TLAEQLTVMVHGREDYEQSMSAGQILFGNNTHDQLRQMSEELLKEVMAGVPNYNVGRTLL 361

Query: 345 EVSRGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
           E + G+ LL L+V+ A    S  E R+ + SN I +N   ++++   +   D  +   + 
Sbjct: 362 EQADGVKLLDLLVEHAPIFKSKGELRKLIASNGISLNKEKVADQDRVVTTDDLIAGKYLI 421

Query: 404 LSFGKKNHIICHLC 417
           +  GKKN+ +  + 
Sbjct: 422 VQRGKKNYYLITVS 435


>gi|326801292|ref|YP_004319111.1| Tyrosyl-tRNA synthetase [Sphingobacterium sp. 21]
 gi|326552056|gb|ADZ80441.1| Tyrosyl-tRNA synthetase [Sphingobacterium sp. 21]
          Length = 430

 Score =  467 bits (1203), Expect = e-129,   Method: Composition-based stats.
 Identities = 140/428 (32%), Positives = 218/428 (50%), Gaps = 22/428 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG +  I    E      +GV + YIG+D T  SLH GHLTQ+M L   Q+ 
Sbjct: 2   NFVDELRWRGMLQDIMPGTE--EQLEKGVTSGYIGFDPTGDSLHVGHLTQIMTLIHFQRA 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT---GKTDA 123
           GH+PI+L+GG T +IGDPSF+   R ++  + ++ N+  ++     F+ +         A
Sbjct: 60  GHRPIALVGGATGMIGDPSFKSAERNLLDEETLRHNVSCLEKQLRKFLDFDNQSGKGNGA 119

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           +M+NN  W    K++D +R++G   +VN M++ +SV+ RL+ E  LSF EF+Y ++Q YD
Sbjct: 120 IMVNNYDWFKDFKFLDFIRDVGKLITVNYMMAKDSVKKRLEGENGLSFTEFSYQLIQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F  L K+  C +QMGGSDQWGNI+ G +   R      F LT+ L+    GTK GKT SG
Sbjct: 180 FYYLWKHKGCMIQMGGSDQWGNIVTGSEFIRRQDGGSAFGLTTQLIKKTDGTKFGKTESG 239

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKKI 301
           A+WL+ + TSPY ++Q+W N  D D  ++ K  T    +EID +         +   +K 
Sbjct: 240 AVWLDAKKTSPYKYYQFWLNASDEDAKNWIKIFTLKDKAEIDSIIAEHDAAPHLRIVQKA 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDEVS 347
           +A +IT   H     + A   +   F                      +P   I K+E+ 
Sbjct: 300 LAEDITIRTHSVSAYQMAVKTSEFLFGSGSLDFLSGMDDADVLDVFDGVPQSVIRKEELK 359

Query: 348 RGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+ ++ L+   A    S  EAR+ ++   + IN   + +    I L +  +   I    
Sbjct: 360 NGINVVDLLSTYASVFPSKGEARKMIQGGGVSINREKVGSVDQTIDLSNLINNKYIIAQK 419

Query: 407 GKKNHIIC 414
           GKKN+ + 
Sbjct: 420 GKKNYFLL 427


>gi|161506790|ref|YP_001576744.1| tyrosyl-tRNA synthetase [Lactobacillus helveticus DPC 4571]
 gi|189083657|sp|A8YX30|SYY_LACH4 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|160347779|gb|ABX26453.1| Tyrosyl-tRNA synthetase [Lactobacillus helveticus DPC 4571]
          Length = 420

 Score =  467 bits (1203), Expect = e-129,   Method: Composition-based stats.
 Identities = 149/423 (35%), Positives = 210/423 (49%), Gaps = 17/423 (4%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQ-GVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           K D L  L  RG I+Q ++   L    ++   +  Y G D T  SLH GHL   M+L   
Sbjct: 3   KFDILEDLKWRGAINQETDEEGLRKYLAEHDDLALYCGTDPTGDSLHIGHLIPFMILKRF 62

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q  G+ P+ L+GGGT  IGDPS R   R +  + +++ N E +            G  + 
Sbjct: 63  QMAGYHPVILIGGGTGAIGDPSGRKTERTLQTADQVKHNEECLTNQMKKLF----GTENF 118

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            + NN  WL  +  ID LR+ G FF VN M++ E V SRL  E  +SF EF Y ILQA D
Sbjct: 119 EIRNNAEWLGKLNLIDFLRDYGKFFQVNNMINKEVVASRL--ENGISFTEFTYQILQAID 176

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTL 241
           F  L K+   +LQ+GGSDQWGNI  GIDL  +L+      F LT PL+  A GTK GK+ 
Sbjct: 177 FYHLNKDDGVQLQIGGSDQWGNITAGIDLIHKLEGADRPAFGLTIPLMLKADGTKFGKSA 236

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAK 299
            GA+WL+ E TSPY F+Q+W N DD DVV + K    L   EI+ +A+   KE     A+
Sbjct: 237 GGAVWLDPEKTSPYEFYQFWINQDDRDVVKYLKYFAFLSREEIEDLAEKTEKEPWKRAAQ 296

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRGMGLL 353
           K +A E+T  VHG    ++A       F  +I +  +  I        S +  S    L+
Sbjct: 297 KRLAEEVTKFVHGEAGLKEAQMITDALFSGNIKNLSVTQIEQGLKNAPSAEAGSEKKNLV 356

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
             +V      S  +AR  +K+ AI +N     +    +          + +  GK+ + +
Sbjct: 357 DFLVDTKIEPSKRQAREDIKNGAIYVNGDREQSVDFDVDPSSAFDGKYVIIRKGKRKYTL 416

Query: 414 CHL 416
             +
Sbjct: 417 VTI 419


>gi|227877944|ref|ZP_03995949.1| tyrosyl-tRNA synthetase [Lactobacillus crispatus JV-V01]
 gi|256849270|ref|ZP_05554703.1| tyrosyl-tRNA synthetase [Lactobacillus crispatus MV-1A-US]
 gi|262047284|ref|ZP_06020242.1| tyrosyl-tRNA synthetase [Lactobacillus crispatus MV-3A-US]
 gi|293381496|ref|ZP_06627491.1| tyrosyl-tRNA synthetase [Lactobacillus crispatus 214-1]
 gi|312984408|ref|ZP_07791744.1| tyrosine--tRNA ligase [Lactobacillus crispatus CTV-05]
 gi|227862447|gb|EEJ69961.1| tyrosyl-tRNA synthetase [Lactobacillus crispatus JV-V01]
 gi|256714046|gb|EEU29034.1| tyrosyl-tRNA synthetase [Lactobacillus crispatus MV-1A-US]
 gi|260572529|gb|EEX29091.1| tyrosyl-tRNA synthetase [Lactobacillus crispatus MV-3A-US]
 gi|290921966|gb|EFD98973.1| tyrosyl-tRNA synthetase [Lactobacillus crispatus 214-1]
 gi|310894195|gb|EFQ43281.1| tyrosine--tRNA ligase [Lactobacillus crispatus CTV-05]
          Length = 420

 Score =  467 bits (1203), Expect = e-129,   Method: Composition-based stats.
 Identities = 146/423 (34%), Positives = 210/423 (49%), Gaps = 17/423 (4%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQ-GVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           K D L  L  RG I+Q ++   L    ++      Y G D T  SLH GHL   M+L   
Sbjct: 3   KFDILEDLKWRGAINQETDEEGLRKYLAEHDDWALYCGTDPTGDSLHIGHLIPFMILKRF 62

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q  G+ P+ L+GG T  IGDPS R   R +  +++++ N E +            G  + 
Sbjct: 63  QMAGYHPVILIGGVTGAIGDPSGRKTERTLQTAEQVKHNEESLTNQMKKLF----GTENF 118

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            + NN  WL  +  ID LR+ G  F VN M++ + V SRL  E  +SF EF Y ILQA D
Sbjct: 119 EIRNNAEWLSKLNLIDFLRDYGKLFQVNNMINKDVVASRL--ENGISFTEFTYQILQAID 176

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTL 241
           F  L K+   +LQ+GGSDQWGNI  GIDL  +L+      F LT PL+  A GTK GK+ 
Sbjct: 177 FYHLNKDDGVQLQIGGSDQWGNITAGIDLIHKLEGADRPAFGLTIPLMLKADGTKFGKSA 236

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAK 299
            GA+WL+ E TSPY F+Q+W N DD DVV + K  T L   EI+ +A+   KE     A+
Sbjct: 237 GGAVWLDPEKTSPYEFYQFWINQDDRDVVKYLKYFTFLSREEIEDLAEKTEKEPWKRAAQ 296

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRGMGLL 353
           K +A E+T  VHG    E+A       F  +I +  +  I        S +  +    ++
Sbjct: 297 KKLAEEVTKFVHGEAGLEEAKMITDALFSGNIKNLSVAQIEQGLKNAPSAEAGNEKKNIV 356

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
             +V      S  +AR  +K+ AI +N     +   ++          + +  GK+ + +
Sbjct: 357 DFLVDTKIEPSKRQAREDVKNGAIYVNGDREQSTDFEVDPSSDFDGKYVIIRKGKRKYTL 416

Query: 414 CHL 416
             +
Sbjct: 417 VTI 419


>gi|328470193|gb|EGF41104.1| tyrosyl-tRNA synthetase [Vibrio parahaemolyticus 10329]
          Length = 419

 Score =  467 bits (1202), Expect = e-129,   Method: Composition-based stats.
 Identities = 154/416 (37%), Positives = 228/416 (54%), Gaps = 12/416 (2%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L +RG I Q S+  E+  L SQ   T Y G+D TA SLH GHL  L++L   Q  G
Sbjct: 5   LLQDLQDRGLIAQASDLEEIQTLLSQ-PQTVYCGFDPTAGSLHIGHLVPLIMLKRFQDAG 63

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+ ++L+GG T +IGDPSF+   R +  ++ +   +  +       + +   K    M+N
Sbjct: 64  HQAVALIGGATGMIGDPSFKATERSLNSAEIVSGWVNDLSNQIQQLMNHQLSKPMI-MVN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDFVE 186
           N  W+ +I  ID  R++G  FS+N M++ ESV+ RL+R +Q +SF EF+Y +LQ+YDF E
Sbjct: 123 NADWMRAINVIDFFRDVGKHFSINTMINRESVKQRLQRPDQGISFTEFSYALLQSYDFAE 182

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + Y CRLQ+GG+DQWGNI+ GIDL  R    ++F LT PL+T + GTK GKT  GA+W
Sbjct: 183 LNRQYGCRLQIGGNDQWGNIVSGIDLTRRQNGEQVFGLTLPLITKSDGTKFGKTEGGAVW 242

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE--INEAKKIIAT 304
           L+   TSPY F+Q+W   +DADV  F +  T L   EI  +           +A++I+A 
Sbjct: 243 LDPSKTSPYAFYQFWLGAEDADVYHFLRYYTFLSYEEIASIEAQDQASQGKPQAQRILAE 302

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHS---QHMPTISIS--KDEVSRGMGLLTLIVKA 359
           E+T  VHG E    A       F  ++       +  + +      VS    L+ L++++
Sbjct: 303 EMTRFVHGEEGLASAERITQALFSGNVQQLSLGELKQLELDGLPSIVSAQQDLVELLIES 362

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           G A+S   AR H+ +NAI +N   +S +   +    FD      L  GKK+  +  
Sbjct: 363 GLASSKRVAREHISNNAISVNGEKVSADNPSLSFPLFD--QYWLLQRGKKHFCLVK 416


>gi|317504618|ref|ZP_07962586.1| tyrosine--tRNA ligase [Prevotella salivae DSM 15606]
 gi|315664267|gb|EFV03966.1| tyrosine--tRNA ligase [Prevotella salivae DSM 15606]
          Length = 433

 Score =  467 bits (1202), Expect = e-129,   Method: Composition-based stats.
 Identities = 143/434 (32%), Positives = 226/434 (52%), Gaps = 27/434 (6%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
            +F+  L  RG + QI    E        +V+AY+G D TA SLH GHL  +M+L  LQ+
Sbjct: 3   KNFVEELKWRGMLAQIMPGTE--EYLQTHMVSAYLGTDPTADSLHIGHLCGIMMLRHLQR 60

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG-TGKTDAL 124
            GHKP  L+GG T +IGDPS + + R ++ S+ +  N E IK   + F+ +  +    A 
Sbjct: 61  CGHKPYLLVGGATGMIGDPSGKSQERNLLDSETLYHNQEAIKKQVAKFLDFDGSEPNKAE 120

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQAY 182
           ++NN  W+    ++D  RE+G   +VN M++ +SV+ RL  E    LSF EF Y +LQ Y
Sbjct: 121 LVNNYDWMKDFTFLDFAREVGKHITVNYMMAKDSVQKRLNGEARDGLSFTEFTYQLLQGY 180

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL--KTPKLFALTSPLLTTASGTKMGKT 240
           DF+   ++Y  RLQ+GG+DQWGN+  G +L  R      + F LT PL+T A G K GKT
Sbjct: 181 DFLYQYQHYGVRLQLGGNDQWGNMTTGTELIHRTLGNDAEAFCLTCPLITKADGKKFGKT 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEA 298
            SG +WL+++ T+PY F+Q+W N+ D+D   + K  T L   EID +     ++      
Sbjct: 241 ESGNVWLDRQRTTPYAFYQFWLNVSDSDAERYIKIFTDLDKEEIDGLVAEHQQDPGRRIL 300

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKD 344
           +K +A E+TTMVH +E+ + A  A+   F  +                 + +P  +I + 
Sbjct: 301 QKRLAEEVTTMVHSKEDLDMAIAASNILFGKATKDSLAQLDEATLNDVFKDVPHYTIDRS 360

Query: 345 EVSRGMGLLTLIVKAG--FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNI 402
            +  G   + +  + G     S +E R+ +K   + +N   +S     +   D      +
Sbjct: 361 LL--GNPAVDVFNQEGMDIFPSKSEMRKLVKGGGVSLNKEKLSAFDQLVTTDDLIDGKYL 418

Query: 403 KLSFGKKNHIICHL 416
            +  GKKN+ +  +
Sbjct: 419 LVQRGKKNYYLITV 432


>gi|297587828|ref|ZP_06946472.1| tyrosine--tRNA ligase [Finegoldia magna ATCC 53516]
 gi|297574517|gb|EFH93237.1| tyrosine--tRNA ligase [Finegoldia magna ATCC 53516]
          Length = 415

 Score =  467 bits (1202), Expect = e-129,   Method: Composition-based stats.
 Identities = 170/411 (41%), Positives = 254/411 (61%), Gaps = 5/411 (1%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L  RG+  Q +   EL  L  +  V  YIG+D TA SL  GH  QLM++  +Q  
Sbjct: 10  NVYDELVARGYFEQATYEDELRDLLGKERVPFYIGFDATADSLTIGHFIQLMVMMRMQAH 69

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH PI L+GGGT++IGDPS R++ R +M  + I EN  +     + FI +G  K  A + 
Sbjct: 70  GHIPICLLGGGTTMIGDPSGRNDMRSIMTKEVIDENARRFYSQMTRFIDFGEDK--AYIE 127

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN+ WL ++ ++D +REIG  FSVN+ML+ ES ++R+K  + L+F EF+YM++Q+YD++ 
Sbjct: 128 NNKNWLLNLNFLDFMREIGVHFSVNQMLTLESYKNRMK--KGLTFFEFSYMLMQSYDYLV 185

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + Y C+LQMGGSDQW NI+ G DL  +L+  K++A+T  LLTTA G KMGK+  GA+W
Sbjct: 186 LYRKYGCKLQMGGSDQWSNILGGYDLVRKLENDKVYAMTFKLLTTADGVKMGKSQKGAVW 245

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           L++  T+PY+ +QY RN+DD DV  F   LT LP  E  R+  L+G +IN+AK+++A E+
Sbjct: 246 LDENKTTPYDLFQYMRNVDDRDVEKFLLMLTFLPTEECKRLGSLEGSDINKAKEVLAFEV 305

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
             +VHG E+AE+A   A   F+ +   ++MPT  +   +   G+GLL L+   G   S +
Sbjct: 306 CKLVHGEEKAEEARQTANALFNSNAVDENMPTTEMKALDFENGIGLLNLLTMTGLTQSNS 365

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           EARR +  N I +N+   S+ K  + + DF+    + +  GKK +    L 
Sbjct: 366 EARRLVTQNGISVNDKKESDPKRIVTIHDFNDD-ELIIKKGKKVYHRVKLV 415


>gi|48290318|emb|CAF33979.1| tyrosyl t-RNA synthetase [Enterococcus durans]
          Length = 418

 Score =  467 bits (1202), Expect = e-129,   Method: Composition-based stats.
 Identities = 148/425 (34%), Positives = 220/425 (51%), Gaps = 23/425 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L+ R  I+Q ++   L  L  +  ++ Y G D T  S+H GHL   M++   Q  
Sbjct: 2   NIIDELTWRDAINQQTSEERLRELVDEKSISLYCGVDPTGDSMHIGHLIPFMMMKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P  L+GGGT  IGDPS R   R +   +++Q N++ +        K      +   +
Sbjct: 62  GHHPYILIGGGTGTIGDPSGRKTERVLQTMEQVQHNVDALSNQMR---KLFGKDANITFV 118

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  I  ++ LR+ G  F++N ML+ + V SRL  E  +SF EF Y ILQ+ DF+ 
Sbjct: 119 NNYDWLSKISLLEFLRDYGKNFNINTMLAKDIVASRL--EVGISFTEFTYQILQSIDFLH 176

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSGA 244
           L K +D +LQ+GG+DQWGNI  G+DL  +L+ P  + F LT PL+  A GTK GKT  GA
Sbjct: 177 LHKTFDVQLQIGGADQWGNITAGLDLIRKLEGPEAEAFGLTIPLMLKADGTKFGKTAGGA 236

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKII 302
           IWL+ E TSP+ F+Q+W N DD DVV + K  T L   EI  ++K      E  EA++ +
Sbjct: 237 IWLDPEKTSPFEFYQFWLNQDDRDVVKYLKFFTFLTQEEIAELSKKVETEPEKREAQRRL 296

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQH----------MPTISISKDEVSRGMGL 352
           A E+T  VH  E+ ++A       F  +I   +          MP + IS    S    +
Sbjct: 297 AEEVTRFVHSEEDLKEAQKITDALFSGNIKELNAAEIAQGFGKMPNVEIS----SNPENI 352

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           + L+V      S  +AR  + + AI IN   +++    I   D      + +  GKKN+ 
Sbjct: 353 VELLVSTKIEPSKRQAREDVSNGAISINGDRVTDLNFVINPFDAFDGKFVVIRKGKKNYF 412

Query: 413 ICHLC 417
           +  + 
Sbjct: 413 LAKVV 417


>gi|313114152|ref|ZP_07799704.1| tyrosyl-tRNA synthetase [Faecalibacterium cf. prausnitzii KLE1255]
 gi|310623561|gb|EFQ06964.1| tyrosyl-tRNA synthetase [Faecalibacterium cf. prausnitzii KLE1255]
          Length = 444

 Score =  467 bits (1202), Expect = e-129,   Method: Composition-based stats.
 Identities = 169/391 (43%), Positives = 247/391 (63%), Gaps = 7/391 (1%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG + QI++   +D L + G  T YIG+D TA SL AGH   L L+  LQ  G
Sbjct: 41  LYEELKARGLVAQITDEEIID-LINNGKATFYIGFDCTADSLTAGHFMALTLMKRLQMAG 99

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           +KPI+L+GGGT++IGDPS R + R+M+  ++I  N    K     FI +  GK  ALMLN
Sbjct: 100 NKPIALIGGGTTMIGDPSGRTDMRKMLTKEDIAHNAACFKKQMEKFIDFSEGK--ALMLN 157

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL ++ Y++LLR++G+ FSVN ML  +    R+  E+ LSFLEFNYMI+Q+YDF  +
Sbjct: 158 NADWLLNLNYVELLRDVGACFSVNNMLRAKCYEQRM--EKGLSFLEFNYMIMQSYDFYYM 215

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            ++Y C +Q GG DQW N++ G +L  R      +A+T  LLT + G KMGKT   A+WL
Sbjct: 216 FQHYGCNMQFGGDDQWSNMLGGTELIRRKLGKDAYAMTITLLTDSQGKKMGKTAGNAVWL 275

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           +   TSP+ F+QYWRN+ DADV+   + LT LP+ +ID M+  + + +NEAK+I+A E+T
Sbjct: 276 DPNKTSPFEFYQYWRNVGDADVMKCIRMLTFLPLEQIDEMSTWKDQRLNEAKEILAYELT 335

Query: 308 TMVHGREEAEKAATAAMECFDMSI-HSQHMPTISISKDEVSRG-MGLLTLIVKAGFATST 365
           +MVHG+EEAEKA  AA   F  S   ++HMP+  +++ +++ G +G+LTL+VKAG A S 
Sbjct: 336 SMVHGKEEAEKAQNAARALFSGSAMDTEHMPSTQLTEADLTDGSIGILTLMVKAGLAASN 395

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
            EARR +    + ++   ++   +    +  
Sbjct: 396 GEARRLVVQGGVLVDGEKVAAPTVGFTAEQL 426


>gi|302550487|ref|ZP_07302829.1| tyrosyl-tRNA synthetase [Streptomyces viridochromogenes DSM 40736]
 gi|302468105|gb|EFL31198.1| tyrosyl-tRNA synthetase [Streptomyces viridochromogenes DSM 40736]
          Length = 422

 Score =  466 bits (1201), Expect = e-129,   Method: Composition-based stats.
 Identities = 139/422 (32%), Positives = 227/422 (53%), Gaps = 11/422 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +D +  L  RG     ++   L    + G VT Y G+D TA SLH GHL Q++ +  LQ+
Sbjct: 2   TDIVDELKWRGLFALSTDEDALRKALADGPVTFYCGFDPTAPSLHVGHLVQVLTVRRLQQ 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+P++L+GG T +IGDP      R +   + +   + K++     F+ +  G+  A+M
Sbjct: 62  AGHRPLALVGGATGLIGDPRP-TAERTLNDPETVTGWVAKLRAQIEPFLTF-EGENAAVM 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  W  ++  I+ LR+IG  F VN+ML+ +SV  RL+  + +S+ EF+Y +LQ  DF+
Sbjct: 120 VNNLDWTENLSAIEFLRDIGKHFRVNKMLTKDSVARRLESSEGISYTEFSYQLLQGMDFL 179

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASGTKMGKTLSGA 244
           +L + Y C LQ GGSDQWGN+  G+DL  RL+    + A+ +PL+T A GTK GKT  GA
Sbjct: 180 QLYRRYGCTLQQGGSDQWGNLTAGLDLIHRLEPDATVHAMATPLMTKADGTKFGKTEGGA 239

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKII 302
           +WL+ EMT+PY F+Q+W N+DD D+  + + L+     E++ + +   +      A++ +
Sbjct: 240 VWLDPEMTTPYAFYQFWLNVDDRDISKYMRILSFRSREELEELERQTEERPQARAAQRAL 299

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQ------HMPTISISKDEVSRGMGLLTLI 356
           A E+TT+VHG ++      A+   F     ++            +   +V+    ++ L 
Sbjct: 300 AEELTTLVHGADQTAAVIAASKALFGQGELAELDEKTLAAALSEVPHIQVAELGPVVDLF 359

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            + G   S + ARR +K     +NN  ++ E      +D      + L  GKKN     +
Sbjct: 360 AEVGLVASKSAARRTVKEGGAYVNNVKVAGEDAVPAEEDLLHGRWLVLRRGKKNLAAAEV 419

Query: 417 CG 418
            G
Sbjct: 420 TG 421


>gi|153832312|ref|ZP_01984979.1| tyrosyl-tRNA synthetase [Vibrio harveyi HY01]
 gi|148871623|gb|EDL70478.1| tyrosyl-tRNA synthetase [Vibrio harveyi HY01]
          Length = 418

 Score =  466 bits (1201), Expect = e-129,   Method: Composition-based stats.
 Identities = 154/416 (37%), Positives = 225/416 (54%), Gaps = 12/416 (2%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            +  L  RG I Q S+  ++  L S    T Y G+D TA SLH GHL  L++L   Q  G
Sbjct: 3   LIEDLQARGLIAQASDLDQVQQLLST-PQTLYCGFDPTAGSLHIGHLVPLIMLKRFQDAG 61

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+ I+L+GG T +IGDPSF+   R +   + +   ++ +       +     K    M+N
Sbjct: 62  HQAIALIGGATGMIGDPSFKATERSLNSEETVTGWVQDLSNQIQQLMNKQVSKPMI-MVN 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDFVE 186
           N  W+  I  ID  R++G  FSVN M+S ESV+ RL+R +Q +SF EF+Y +LQ+YDF E
Sbjct: 121 NADWVKQINVIDFFRDVGKHFSVNTMISRESVKQRLQRPDQGISFTEFSYALLQSYDFAE 180

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + Y CRLQ+GG+DQWGNI+ GIDL  R    ++F LT PL+T + GTK GKT  GA+W
Sbjct: 181 LNRLYGCRLQIGGNDQWGNIVSGIDLTRRQNGEQVFGLTLPLITKSDGTKFGKTEGGAVW 240

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIAT 304
           L+   TSPY F+Q+W + +DADV  F +  T L   EI  +     + K   +A++I+A 
Sbjct: 241 LDPSKTSPYAFYQFWLSAEDADVYHFLRYYTFLSCDEIAAIEAQDKESKGKPQAQRILAE 300

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI-SISKDEV----SRGMGLLTLIVKA 359
           ++T  VHG E    A       F  ++    +  +  +  D +    S    L+ L+V++
Sbjct: 301 QMTRFVHGEEGLASAERITQALFSGNVQQLSLSELKQLELDGLPSMQSAEQDLVELLVES 360

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           G A S   AR  + +NAI +N   +  E   +    FD      L  GKK+  +  
Sbjct: 361 GLANSKRIARELIGNNAISVNGEKVDAENPSLNFPLFD--QYWLLQRGKKHFYLVK 414


>gi|160945187|ref|ZP_02092413.1| hypothetical protein FAEPRAM212_02706 [Faecalibacterium prausnitzii
           M21/2]
 gi|158442918|gb|EDP19923.1| hypothetical protein FAEPRAM212_02706 [Faecalibacterium prausnitzii
           M21/2]
          Length = 406

 Score =  466 bits (1201), Expect = e-129,   Method: Composition-based stats.
 Identities = 171/391 (43%), Positives = 245/391 (62%), Gaps = 7/391 (1%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG + QI++   +D L + G  T YIG+D TA SL AGH   L L+  LQ  G
Sbjct: 3   LYEELKARGLVAQITDEEIID-LINNGKATFYIGFDCTADSLTAGHFLALTLMKRLQLAG 61

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           +KPI+L+GGGT++IGDPS R + R+M+   +I  N    K     FI +  GK  ALMLN
Sbjct: 62  NKPIALIGGGTTMIGDPSGRTDMRKMLTKDDIAHNAACFKKQMEKFIDFSEGK--ALMLN 119

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  + Y++LLRE+G+ FSVN ML  E  + R+  E+ LSFLEFNYMI+Q+YDF  +
Sbjct: 120 NADWLLDLNYVELLREVGACFSVNNMLRAECYKQRM--EKGLSFLEFNYMIMQSYDFYYM 177

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            ++Y C +Q GG DQW N++ G +L  R      +A+T  LLT + G KMGKT   A+WL
Sbjct: 178 FQHYGCNMQFGGDDQWSNMLGGTELIRRKLGKDAYAMTVTLLTDSQGKKMGKTAGNAVWL 237

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           +   TSP+ F+QYWRN+ DADV+   + LT LP+ +ID M+  Q + +NEAK+I+A E+T
Sbjct: 238 DPNKTSPFEFYQYWRNVGDADVMKCIRMLTFLPLEQIDEMSTWQNQRLNEAKEILAYEMT 297

Query: 308 TMVHGREEAEKAATAAMECFDMSI-HSQHMPTISISKDEVSRG-MGLLTLIVKAGFATST 365
           +MVHG+EEAEKA  AA   F  +   ++HMP+  +++ +++ G +G+LTL+VKAG A S 
Sbjct: 298 SMVHGKEEAEKAQNAARALFSGNAMDTEHMPSTQLTEADLTDGAIGILTLMVKAGLAASN 357

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
            EARR +    +  +   ++   +    +  
Sbjct: 358 GEARRLVVQGGVLADGEKVAAPTVSFTAEQL 388


>gi|288926857|ref|ZP_06420764.1| tyrosine--tRNA ligase [Prevotella buccae D17]
 gi|288336382|gb|EFC74761.1| tyrosine--tRNA ligase [Prevotella buccae D17]
          Length = 432

 Score =  466 bits (1201), Expect = e-129,   Method: Composition-based stats.
 Identities = 144/432 (33%), Positives = 221/432 (51%), Gaps = 27/432 (6%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
            +F+  L  RG + QI    E     ++ +V+AY+G D TA SLH GHL  +M+L  LQ+
Sbjct: 2   KNFVEELKWRGMLAQIMPGTE--EYLNEHLVSAYLGTDPTADSLHIGHLCGIMMLRHLQR 59

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG-TGKTDAL 124
            GHKP  L+GG T +IGDPS + + R ++ S+ +  N E IK   + F+ +       A 
Sbjct: 60  CGHKPYLLVGGATGMIGDPSGKSQERNLLDSETLYHNQEAIKKQAAKFLDFDSDEPNKAE 119

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQAY 182
           M+NN  W+    ++D  RE+G   +VN M++ +SV+ RL  E    LSF EF Y +LQ Y
Sbjct: 120 MVNNYDWMKDFTFLDFAREVGKHITVNYMMAKDSVKKRLNGEASDGLSFTEFTYQLLQGY 179

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKLFALTSPLLTTASGTKMGKT 240
           DF+   ++Y  RLQ+GG+DQWGN+  G +L  R      + F LT PL+T A G K GKT
Sbjct: 180 DFLYQYQHYGVRLQLGGNDQWGNMTTGTELIRRTLGADAEAFCLTCPLITKADGKKFGKT 239

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEA 298
            SG +WL++  T+PY F+Q+W N+ D D   + K  T+L    I+ + +   ++      
Sbjct: 240 ESGNVWLDRNRTTPYAFYQFWLNVSDDDAERYIKIFTSLERDVIEALIEEHRQDPGRRVL 299

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQ--------------HMPTISISKD 344
           +K +A E+TTMVH RE+ + A  A+   F  +                   +P   + K 
Sbjct: 300 QKRLAEEVTTMVHSREDLDMAIAASNILFGKATKDSLAQLDEATLNDVFADVPHYDLDKS 359

Query: 345 EVSRGMGLLTLIVKAG--FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNI 402
            +  G   + L    G     S  E R+ +K   + +N   ++     I   D      +
Sbjct: 360 LL--GQTAVDLFCSEGMDIFPSKGEMRKLVKGGGVSLNKEKLAAFDRPITADDLIDGKYL 417

Query: 403 KLSFGKKNHIIC 414
            +  GKKN+ + 
Sbjct: 418 LVQRGKKNYYLL 429


>gi|227517595|ref|ZP_03947644.1| tyrosine--tRNA ligase [Enterococcus faecalis TX0104]
 gi|227554748|ref|ZP_03984795.1| tyrosine--tRNA ligase [Enterococcus faecalis HH22]
 gi|229546460|ref|ZP_04435185.1| tyrosine--tRNA ligase [Enterococcus faecalis TX1322]
 gi|229548575|ref|ZP_04437300.1| tyrosine--tRNA ligase [Enterococcus faecalis ATCC 29200]
 gi|293384954|ref|ZP_06630789.1| tyrosine--tRNA ligase [Enterococcus faecalis R712]
 gi|293389225|ref|ZP_06633687.1| tyrosine--tRNA ligase [Enterococcus faecalis S613]
 gi|307268205|ref|ZP_07549590.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX4248]
 gi|307272446|ref|ZP_07553700.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0855]
 gi|307277081|ref|ZP_07558186.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX2134]
 gi|307278276|ref|ZP_07559355.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0860]
 gi|307289672|ref|ZP_07569616.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0109]
 gi|307289902|ref|ZP_07569832.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0411]
 gi|312900223|ref|ZP_07759535.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0470]
 gi|312904348|ref|ZP_07763510.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0635]
 gi|312905944|ref|ZP_07764957.1| tyrosyl-tRNA synthetase [Enterococcus faecalis DAPTO 512]
 gi|312909290|ref|ZP_07768146.1| tyrosyl-tRNA synthetase [Enterococcus faecalis DAPTO 516]
 gi|312953010|ref|ZP_07771863.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0102]
 gi|21309883|gb|AAM46083.1| tyrosyl-t-RNA synthetase [Enterococcus faecalis]
 gi|227074994|gb|EEI12957.1| tyrosine--tRNA ligase [Enterococcus faecalis TX0104]
 gi|227176119|gb|EEI57091.1| tyrosine--tRNA ligase [Enterococcus faecalis HH22]
 gi|229306310|gb|EEN72306.1| tyrosine--tRNA ligase [Enterococcus faecalis ATCC 29200]
 gi|229308433|gb|EEN74420.1| tyrosine--tRNA ligase [Enterococcus faecalis TX1322]
 gi|291077772|gb|EFE15136.1| tyrosine--tRNA ligase [Enterococcus faecalis R712]
 gi|291081389|gb|EFE18352.1| tyrosine--tRNA ligase [Enterococcus faecalis S613]
 gi|306499043|gb|EFM68531.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0411]
 gi|306499486|gb|EFM68859.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0109]
 gi|306505027|gb|EFM74218.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0860]
 gi|306506252|gb|EFM75417.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX2134]
 gi|306510908|gb|EFM79924.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0855]
 gi|306515474|gb|EFM84004.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX4248]
 gi|310627939|gb|EFQ11222.1| tyrosyl-tRNA synthetase [Enterococcus faecalis DAPTO 512]
 gi|310629039|gb|EFQ12322.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0102]
 gi|310632444|gb|EFQ15727.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0635]
 gi|311290314|gb|EFQ68870.1| tyrosyl-tRNA synthetase [Enterococcus faecalis DAPTO 516]
 gi|311292584|gb|EFQ71140.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0470]
 gi|315025584|gb|EFT37516.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX2137]
 gi|315030556|gb|EFT42488.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX4000]
 gi|315031334|gb|EFT43266.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0017]
 gi|315034437|gb|EFT46369.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0027]
 gi|315144525|gb|EFT88541.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX2141]
 gi|315146919|gb|EFT90935.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX4244]
 gi|315149371|gb|EFT93387.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0012]
 gi|315153921|gb|EFT97937.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0031]
 gi|315156719|gb|EFU00736.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0043]
 gi|315159750|gb|EFU03767.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0312]
 gi|315162722|gb|EFU06739.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0645]
 gi|315166205|gb|EFU10222.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX1302]
 gi|315166808|gb|EFU10825.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX1341]
 gi|315170800|gb|EFU14817.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX1342]
 gi|315173858|gb|EFU17875.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX1346]
 gi|315576124|gb|EFU88315.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0309B]
 gi|315578789|gb|EFU90980.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0630]
 gi|315581554|gb|EFU93745.1| tyrosyl-tRNA synthetase [Enterococcus faecalis TX0309A]
 gi|327534219|gb|AEA93053.1| tyrosine--tRNA ligase [Enterococcus faecalis OG1RF]
 gi|329576903|gb|EGG58386.1| tyrosine--tRNA ligase [Enterococcus faecalis TX1467]
          Length = 423

 Score =  466 bits (1201), Expect = e-129,   Method: Composition-based stats.
 Identities = 148/430 (34%), Positives = 220/430 (51%), Gaps = 23/430 (5%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M     + +  L+ R  I+Q +N   L  L     ++ Y G D T  S+H GHL   M++
Sbjct: 1   MEGDNMNIIDELAWRDAINQQTNEEGLRELTENTSISLYCGVDPTGDSMHIGHLIPFMMM 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GH P  L+GGGT  IGDPS R   R +   + +Q N++ +        K     
Sbjct: 61  KRFQLAGHHPYILIGGGTGTIGDPSGRTTERVLQTMEAVQHNVDSLSNQMK---KLFGKD 117

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
            +  M+NN  WL  +  +D LR+ G  F+VN ML+ + V SRL+    +SF EF Y ILQ
Sbjct: 118 AEVTMVNNYDWLSELSLLDFLRDYGKNFNVNTMLAKDIVASRLES--GISFTEFTYQILQ 175

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMG 238
           + DF  L K ++ +LQ+GG+DQWGNI  G+DL  + + P  K+F LT PL+  A GTK G
Sbjct: 176 SIDFYTLHKKHNIQLQIGGADQWGNITAGLDLIRKKEGPEAKVFGLTIPLMLKADGTKFG 235

Query: 239 KTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--N 296
           KT  GAIWL+ + TSP+ F+Q+W N DD DV+ + K  T L   EID +A+   KE    
Sbjct: 236 KTAGGAIWLDPKKTSPFEFYQFWLNQDDRDVIKYLKFFTFLDKEEIDALAEKVEKEPGKR 295

Query: 297 EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEV 346
           EA++ +A E+T  VH     E+A   +   F  +I            +H+PT+ I+KD  
Sbjct: 296 EAQRRLAEEVTRFVHDDAALEEAQKISEALFSGNIKDLTIEEIEQGLEHVPTVEITKD-- 353

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
                ++  +V      S  +AR  +   AI IN   +++    +          + +  
Sbjct: 354 --AKNIVDWLVDTEIEPSKRQAREDVSGGAISINGDRVTDLDFAVDPTQHFDGKFVVVRK 411

Query: 407 GKKNHIICHL 416
           GKKN+ +  +
Sbjct: 412 GKKNYFLAKV 421


>gi|296393969|ref|YP_003658853.1| tyrosyl-tRNA synthetase [Segniliparus rotundus DSM 44985]
 gi|296181116|gb|ADG98022.1| tyrosyl-tRNA synthetase [Segniliparus rotundus DSM 44985]
          Length = 428

 Score =  466 bits (1201), Expect = e-129,   Method: Composition-based stats.
 Identities = 146/430 (33%), Positives = 232/430 (53%), Gaps = 14/430 (3%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M   +   L  L  RG I Q ++ + L    ++G VT Y G+D TA SLHAGHL  L+  
Sbjct: 1   MTVEQVAPLQELGWRGLIAQSTDEQALAGAFAKGPVTFYAGFDPTADSLHAGHLMLLLTA 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             LQ+ GH+P+ L GG T +IGDP    E R++     ++E +E++K   + F+++    
Sbjct: 61  RRLQRLGHRPVLLAGGATGLIGDPREVGE-RQLADEALVRERVERLKPQLTKFVEFDDSP 119

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           T A++ NN  W   +  +D LR+IG  FSVN ML+ E++R RL     LS+ EF+Y++LQ
Sbjct: 120 TGAVLANNLDWTGQLSALDFLRDIGKHFSVNVMLARETIRKRLD-GDGLSYTEFSYLLLQ 178

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           + D+++L + +   LQ+GGSDQWGNI+ G +L  R+    + ALT+PL+T++ G K+GK+
Sbjct: 179 SNDYLQLHRKFGATLQLGGSDQWGNIVGGAELIRRIDGAHVHALTTPLVTSSDGVKLGKS 238

Query: 241 -LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINE 297
              G+IWL+ E TSPY ++QY+  + D+DV  + +  T L  +E +    A  Q      
Sbjct: 239 TGGGSIWLDPEKTSPYAWYQYFLAVQDSDVGKYLRWFTDLDQAEAEELDEATAQRPHQRL 298

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMP--------TISISKDEVSRG 349
           A++ +A E+TT+VHG EE  +   A+   F         P           +++      
Sbjct: 299 AQRRLAQELTTIVHGAEELRRVEAASQALFGSGELKDLEPAALGQALAETPLAQVVPDGA 358

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
             ++ L+V  G   S N ARR ++     +NN  +++ + Q    D+     + L  GK+
Sbjct: 359 TSIVDLLVATGLCESRNAARRTVQEGGAWVNNQRVADAEWQPCEDDWLHGRWLVLRRGKR 418

Query: 410 NHIIC-HLCG 418
           N      L G
Sbjct: 419 NFAGVSRLVG 428


>gi|297171957|gb|ADI22943.1| tyrosyl-tRNA synthetase [uncultured actinobacterium HF0500_35G12]
          Length = 428

 Score =  466 bits (1201), Expect = e-129,   Method: Composition-based stats.
 Identities = 147/421 (34%), Positives = 217/421 (51%), Gaps = 14/421 (3%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L  RG +   ++   L      G VT Y G+D TA SLH GHL  L+ L   Q  G
Sbjct: 6   ILDDLLARGLVQDSTDREALRERLDAGPVTLYCGFDPTADSLHIGHLVPLLALRRFQDAG 65

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT---GKTDAL 124
           H+P++L GG T +IGDPS R E R ++  +E+  N+E +     +F+++     G   AL
Sbjct: 66  HRPVALAGGATGMIGDPSGRSEERNLLAGEELSANVEAVAAQLRAFLRFDDLGPGDQAAL 125

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           +L+N  W   ++ ++ LR++G   +V  ML+ ESV++RL  EQ LSF EF+YM+LQA DF
Sbjct: 126 LLDNREWTVGVEVLEFLRQVGKHVTVGTMLAKESVKARLSGEQGLSFTEFSYMLLQANDF 185

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
            EL + + C LQ+GGSDQWGNI  GIDL  R     +F LT PL+T + G K GKT  G 
Sbjct: 186 YELHQRHGCELQIGGSDQWGNITAGIDLVRRRTGSTVFGLTVPLVTRSDGAKFGKTADGT 245

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKII 302
           +WL+   T PY   QY+  IDD DV     +LT +P++E+  +            A++ +
Sbjct: 246 VWLDPARTLPYELHQYFLQIDDRDVEQLLLQLTLVPVAEVAEVMAGHAASPEGRTAQRRL 305

Query: 303 ATEITTMVHGREEAEKAATAAMECFD--------MSIHSQHMPTISISKDEVSRGMGLLT 354
           A E+ T+VHG EE  +A  AA   F         +      +P   +    +     L+ 
Sbjct: 306 AEEVCTLVHGGEETVRADLAARGLFGATPPTVEILEALRGIVPETIVELAALGGQESLVD 365

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK-NHII 413
            +V +G   S  +ARR +    + +N    S E   +          + L  GK+  H++
Sbjct: 366 ALVASGLCGSRGDARRTIAGGGVSVNGDRQSGEVSALPAGALVDGRFVLLQRGKRIRHLL 425

Query: 414 C 414
            
Sbjct: 426 V 426


>gi|332702737|ref|ZP_08422825.1| Tyrosyl-tRNA synthetase [Desulfovibrio africanus str. Walvis Bay]
 gi|332552886|gb|EGJ49930.1| Tyrosyl-tRNA synthetase [Desulfovibrio africanus str. Walvis Bay]
          Length = 418

 Score =  466 bits (1201), Expect = e-129,   Method: Composition-based stats.
 Identities = 149/422 (35%), Positives = 230/422 (54%), Gaps = 18/422 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG I+Q+S+  ++    S    + Y G+D TASSLH GHL  L+ L+  Q+ 
Sbjct: 2   NIIDELKWRGLIYQVSDEGKVREYLSTPGRSLYCGFDPTASSLHIGHLVPLLALYRFQRA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI+LMGGGT++IGDPS +D  R+++  + I+ +IE IK              +   +
Sbjct: 62  GHRPIALMGGGTALIGDPSGKDVERQLIARETIEASIESIKTQVRRIF-----GGEVRFV 116

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYDFV 185
           NN  W+     I+LLR++G +F+VN M+  ESV++R+ R++  +SF EF+YMILQAYDF 
Sbjct: 117 NNYDWIGRTTAIELLRDVGKYFTVNWMMQKESVKNRISRDEVGISFTEFSYMILQAYDFS 176

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            LA+   C LQ+GGSDQWGNI  G +L  +    +  ALT PL+TTA G K GK+  GAI
Sbjct: 177 VLAEQEGCMLQIGGSDQWGNITAGTELIRKKLGKEAIALTFPLITTADGKKFGKSEKGAI 236

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIA 303
           +L+  +T  Y F+QY+   DD DV+ F +  T +   EI+ +     +  E    ++ +A
Sbjct: 237 FLDPALTPVYEFYQYFMRTDDRDVIRFLRYFTFVSREEIEALEVTLAERPEQRVPQRRLA 296

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI---------SISKDEVSRGMGLLT 354
            E+T +VHG EE  K   A    F      +  P +         S+S   +     L  
Sbjct: 297 AEMTRLVHGEEELLKVEAATAALFGTGDLREVDPVMLRIVFNEAPSVSYPGLEGLPDLPQ 356

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           ++V  G + S  +AR+ L+   + +NN  I +   +    D      + +  GKKN+ + 
Sbjct: 357 ILVDLGLSKSKGQARKDLEQGGVYVNNCRI-DLTWKPSAGDLLHGQALLVRKGKKNYGLV 415

Query: 415 HL 416
            +
Sbjct: 416 QV 417


>gi|229820848|ref|YP_002882374.1| tyrosyl-tRNA synthetase [Beutenbergia cavernae DSM 12333]
 gi|229566761|gb|ACQ80612.1| tyrosyl-tRNA synthetase [Beutenbergia cavernae DSM 12333]
          Length = 422

 Score =  466 bits (1200), Expect = e-129,   Method: Composition-based stats.
 Identities = 136/415 (32%), Positives = 215/415 (51%), Gaps = 19/415 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L  RG I Q ++   L  L   G VT Y G+D +A SLH G+L  ++ +   Q  G
Sbjct: 4   ILEELDWRGLIAQSTDREALGELLDAGPVTFYGGFDPSAPSLHVGNLVLILTMRRFQLAG 63

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+P+ L+GG T +IGDP    E R +     +   + KI+     ++ +  G T A M+N
Sbjct: 64  HRPVGLVGGATGLIGDPRMSGE-RTLNAPDVVAGWVGKIRAQIEPYLDF-DGPTAARMVN 121

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W   +  ID LR++G  F +  ML+ E+V  RL  E  LSF EF+Y ILQ  D++EL
Sbjct: 122 NLDWTAPLSAIDFLRDVGKHFRLGTMLAKETVARRLASEDGLSFTEFSYQILQGMDYLEL 181

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            +  D RLQ+GG+DQWGN++ G++L  +++     ALT+PL+T   GTK GKT  G+IWL
Sbjct: 182 FRRDDVRLQLGGNDQWGNLLSGVELIRKVEGAGAHALTTPLITKPDGTKFGKTEGGSIWL 241

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKIIATE 305
           + E+TSPY F+Q+W N  DADV  + +  T L   EI+   +A  +     EA++ +A  
Sbjct: 242 DPELTSPYAFYQFWFNAADADVGGYLRVFTFLSREEIEALDVAVRERPGAREAQRALAAS 301

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHS-----------QHMPTISISKDEVSRGMGLLT 354
           +T +VHG +  E+   A+   F                   +P+  +   E      ++ 
Sbjct: 302 VTDLVHGAQARERVERASRALFGRDDLDALDERTLADAVAELPSAPLRPGE----TTIVD 357

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
            + + G  +  N ARR +      +NN  + +    + ++D  +   + +  G++
Sbjct: 358 ALAETGLVSGRNAARRAVDEGGAYVNNVKVDDADRVLAVEDLLADRFVLVRRGRR 412


>gi|308094994|ref|ZP_05893140.2| tyrosine--tRNA ligase [Vibrio parahaemolyticus AN-5034]
 gi|308092687|gb|EFO42382.1| tyrosine--tRNA ligase [Vibrio parahaemolyticus AN-5034]
          Length = 435

 Score =  466 bits (1200), Expect = e-129,   Method: Composition-based stats.
 Identities = 155/422 (36%), Positives = 228/422 (54%), Gaps = 24/422 (5%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L +RG I Q S+  E+  L SQ   T Y G+D TA SLH GHL  L++L   Q  G
Sbjct: 21  LLQDLQDRGLIAQASDLEEIQTLLSQ-PQTVYCGFDPTAGSLHIGHLVPLIMLKRFQDAG 79

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+ ++L+GG T +IGDPSF+   R +  ++ +   +  +       + +   K    M+N
Sbjct: 80  HQAVALIGGATGMIGDPSFKATERSLNSAEIVSGWVNDLSNQIQQLMNHQLSKPMI-MVN 138

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDFVE 186
           N  W+ +I  ID  R++G  FS+N M++ ESV+ RL+R +Q +SF EF+Y +LQ+YDF E
Sbjct: 139 NADWMRAINVIDFFRDVGKHFSINTMINRESVKQRLQRPDQGISFTEFSYALLQSYDFAE 198

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + Y CRLQ+GG+DQWGNI+ GIDL  R    ++F LT PL+T + GTK GKT  GA+W
Sbjct: 199 LNRQYGCRLQIGGNDQWGNIVSGIDLTRRQNGEQVFGLTLPLITKSDGTKFGKTEGGAVW 258

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE--INEAKKIIAT 304
           L+   TSPY F+Q+W   +DADV  F +  T L   EI  +           +A++I+A 
Sbjct: 259 LDPSKTSPYAFYQFWLGAEDADVYHFLRYYTFLSCEEIASIEAQDQASQGKPQAQRILAE 318

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHS-----------QHMPTISISKDEVSRGMGLL 353
           E+T  VHG E    A       F  ++               +P+I       S    L+
Sbjct: 319 EMTRFVHGEEGLASAERITQALFSGNVQQLSLGELKQLELDGLPSIE------SAQQDLV 372

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            L++++G A+S   AR H+ +NAI +N   +S +   +    FD      L  GKK+  +
Sbjct: 373 ELLIESGLASSKRVAREHISNNAISVNGEKVSADNPSLSFPLFD--QYWLLQRGKKHFCL 430

Query: 414 CH 415
             
Sbjct: 431 VK 432


>gi|28900223|ref|NP_799878.1| tyrosyl-tRNA synthetase [Vibrio parahaemolyticus RIMD 2210633]
 gi|260361652|ref|ZP_05774679.1| tyrosine--tRNA ligase [Vibrio parahaemolyticus K5030]
 gi|260896505|ref|ZP_05905001.1| tyrosine--tRNA ligase [Vibrio parahaemolyticus Peru-466]
 gi|260899481|ref|ZP_05907876.1| tyrosine--tRNA ligase [Vibrio parahaemolyticus AQ4037]
 gi|81726271|sp|Q87J85|SYY1_VIBPA RecName: Full=Tyrosyl-tRNA synthetase 1; AltName:
           Full=Tyrosine--tRNA ligase 1; Short=TyrRS 1
 gi|28808534|dbj|BAC61711.1| tyrosyl-tRNA synthetase [Vibrio parahaemolyticus RIMD 2210633]
 gi|308089276|gb|EFO38971.1| tyrosine--tRNA ligase [Vibrio parahaemolyticus Peru-466]
 gi|308109218|gb|EFO46758.1| tyrosine--tRNA ligase [Vibrio parahaemolyticus AQ4037]
 gi|308112741|gb|EFO50281.1| tyrosine--tRNA ligase [Vibrio parahaemolyticus K5030]
          Length = 419

 Score =  466 bits (1200), Expect = e-129,   Method: Composition-based stats.
 Identities = 155/422 (36%), Positives = 228/422 (54%), Gaps = 24/422 (5%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L +RG I Q S+  E+  L SQ   T Y G+D TA SLH GHL  L++L   Q  G
Sbjct: 5   LLQDLQDRGLIAQASDLEEIQTLLSQ-PQTVYCGFDPTAGSLHIGHLVPLIMLKRFQDAG 63

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+ ++L+GG T +IGDPSF+   R +  ++ +   +  +       + +   K    M+N
Sbjct: 64  HQAVALIGGATGMIGDPSFKATERSLNSAEIVSGWVNDLSNQIQQLMNHQLSKPMI-MVN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDFVE 186
           N  W+ +I  ID  R++G  FS+N M++ ESV+ RL+R +Q +SF EF+Y +LQ+YDF E
Sbjct: 123 NADWMRAINVIDFFRDVGKHFSINTMINRESVKQRLQRPDQGISFTEFSYALLQSYDFAE 182

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + Y CRLQ+GG+DQWGNI+ GIDL  R    ++F LT PL+T + GTK GKT  GA+W
Sbjct: 183 LNRQYGCRLQIGGNDQWGNIVSGIDLTRRQNGEQVFGLTLPLITKSDGTKFGKTEGGAVW 242

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE--INEAKKIIAT 304
           L+   TSPY F+Q+W   +DADV  F +  T L   EI  +           +A++I+A 
Sbjct: 243 LDPSKTSPYAFYQFWLGAEDADVYHFLRYYTFLSCEEIASIEAQDQASQGKPQAQRILAE 302

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHS-----------QHMPTISISKDEVSRGMGLL 353
           E+T  VHG E    A       F  ++               +P+I       S    L+
Sbjct: 303 EMTRFVHGEEGLASAERITQALFSGNVQQLSLGELKQLELDGLPSIE------SAQQDLV 356

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            L++++G A+S   AR H+ +NAI +N   +S +   +    FD      L  GKK+  +
Sbjct: 357 ELLIESGLASSKRVAREHISNNAISVNGEKVSADNPSLSFPLFD--QYWLLQRGKKHFCL 414

Query: 414 CH 415
             
Sbjct: 415 VK 416


>gi|242280905|ref|YP_002993034.1| tyrosyl-tRNA synthetase [Desulfovibrio salexigens DSM 2638]
 gi|242123799|gb|ACS81495.1| tyrosyl-tRNA synthetase [Desulfovibrio salexigens DSM 2638]
          Length = 422

 Score =  466 bits (1200), Expect = e-129,   Method: Composition-based stats.
 Identities = 144/424 (33%), Positives = 224/424 (52%), Gaps = 18/424 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L  RG I+Q+S+  ++           Y G+D TA SLH G+L  L+ L  +++ 
Sbjct: 2   NIYDELKWRGLINQVSDEEKVREYLDTPGQYMYCGFDPTADSLHIGNLVPLLSLVRMKRA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P+ L+GG T  IGDPS +D+ R     ++++     I+    +F++  TG+  A ++
Sbjct: 62  GHNPLFLLGGATGRIGDPSGKDKEREFTSIEKVESQAANIRTQIEAFVERNTGEK-AEVV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYDFV 185
           NN  W+  I ++D+LR++G  FSVN M++ ESV+ R  R+   +S+ EF+YM+LQ+YDF 
Sbjct: 121 NNYDWMKEISFLDMLRDVGKHFSVNWMMAKESVKGRFGRDDVGISYTEFSYMLLQSYDFY 180

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L     C+LQ+GG DQWGNI  G +L  R    + FA+T PL+TTASG K GK+   A+
Sbjct: 181 HLFNEKGCQLQIGGGDQWGNITAGCELIRRKAQGEGFAVTFPLITTASGQKFGKSEGNAV 240

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLP--MSEIDRMAKLQGKEINEAKKIIA 303
           +LN E+TSPY F+Q+W N DD DV+ F K  T L             +   +  A K +A
Sbjct: 241 FLNAELTSPYTFYQFWINTDDRDVIKFLKYFTFLTEEEIAEIAKEHEEAPHLRAAHKRLA 300

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIH-----------SQHMPTISISKDEVSRGMGL 352
            E T M+HG+EE EK   A    F                 +  P +  +K ++     L
Sbjct: 301 EETTIMIHGKEELEKVQAATAALFGKGDIMSVDAATLRGAMEAAPGVEYAKADLP---DL 357

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
             +++  G   S  +AR+ ++   + INN  +++        DF     + +  GKKN+ 
Sbjct: 358 PQILLDLGMVKSKGQARKDIQGGGLYINNERVADFDYVPGDDDFIGGECMLIRKGKKNYG 417

Query: 413 ICHL 416
           +  L
Sbjct: 418 LVTL 421


>gi|163787240|ref|ZP_02181687.1| tyrosyl-tRNA synthetase [Flavobacteriales bacterium ALC-1]
 gi|159877128|gb|EDP71185.1| tyrosyl-tRNA synthetase [Flavobacteriales bacterium ALC-1]
          Length = 432

 Score =  466 bits (1200), Expect = e-129,   Method: Composition-based stats.
 Identities = 147/432 (34%), Positives = 231/432 (53%), Gaps = 24/432 (5%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
             F+  L+ RG +H       ++    + + +AY+G+D TA SLH G+L  +MLL   Q+
Sbjct: 3   KSFVEELTWRGMLHDSMP--GVEKHMDETMRSAYVGFDPTADSLHIGNLVPIMLLAHYQR 60

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG-TGKTDAL 124
            GHKP++L+GG T +IGDPS +   R ++    ++ N E IK   S F+ +       A+
Sbjct: 61  CGHKPVALVGGATGMIGDPSGKSSERNLLDEATLRHNQEAIKNQLSHFLNFDGKTPNSAV 120

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK---REQSLSFLEFNYMILQA 181
           ++NN  W+    +++ +R++G   +VN M++ +SVR+R+        +SF EF Y ++Q 
Sbjct: 121 LVNNYDWMKEFSFLEFIRDVGKHITVNYMMAKDSVRNRISGESSNDGMSFTEFTYQLVQG 180

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
           YDF+ L +  DC +QMGGSDQWGNI  G +L  R+   K +A+T PL+T + G+K GK+ 
Sbjct: 181 YDFLHLYRANDCTIQMGGSDQWGNITTGTELIRRIGGGKGYAITCPLITKSDGSKFGKSE 240

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAK 299
            G +WL+ + TSPY F+QYW N  D D   + K  T L   EI+ +      +      +
Sbjct: 241 GGNVWLDAKRTSPYKFYQYWLNSSDEDAEKYIKIFTFLTKEEIENIINEHSNDPGARILQ 300

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDE 345
           K +A EIT MVH +E+ E A  A+   F     +              + +    I+K E
Sbjct: 301 KRLAEEITIMVHSKEDYENAVKASKILFSKDFKNEIKELDENLFLDVFEGVKQAEITKAE 360

Query: 346 VSRGMGLL-TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
            + G+ ++  L  K  F +S  EARR LK NAI +N   +  E  ++   D  +   I +
Sbjct: 361 FNDGIDMIGALAAKTNFLSSNGEARRALKENAIAVNKEKVK-EDYKLTSDDLINNKYIVI 419

Query: 405 SFGKKNHIICHL 416
           S GKK + I  +
Sbjct: 420 SRGKKTNFILKM 431


>gi|146298313|ref|YP_001192904.1| tyrosyl-tRNA synthetase [Flavobacterium johnsoniae UW101]
 gi|259516994|sp|A5FMI1|SYY_FLAJ1 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|146152731|gb|ABQ03585.1| tyrosyl-tRNA synthetase [Flavobacterium johnsoniae UW101]
          Length = 431

 Score =  466 bits (1200), Expect = e-129,   Method: Composition-based stats.
 Identities = 155/433 (35%), Positives = 235/433 (54%), Gaps = 24/433 (5%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
            + +  L  RG  H      E  +L  + V +AYIG+D TA SLH G + Q++LL  L+ 
Sbjct: 2   KNLVEELKWRGLYHDSMPGTEEQLL--KEVTSAYIGFDPTADSLHIGSMVQIILLVHLKN 59

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL- 124
            GH+PI+L+GG T +IGDPS + + R ++  + + +N+  IK + S F+ + + + +A  
Sbjct: 60  FGHQPIALVGGATGMIGDPSGKSDERNLLNEETLAKNVAGIKSVLSRFLDFNSKEQNAPI 119

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK-REQSLSFLEFNYMILQAYD 183
           M+NN  W+    +ID  RE+G   +VN M++ +SV+ R+    + +SF EF Y ++Q YD
Sbjct: 120 MVNNYDWMKEFSFIDFAREVGKRITVNYMMAKDSVKKRINGEGEGMSFTEFTYQLIQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTL 241
           F  L KN +C LQMGGSDQWGNI  G +L  R+     K FALT+PL+T A G+K GK+ 
Sbjct: 180 FYHLYKNNNCLLQMGGSDQWGNITTGTELVRRMGGENAKAFALTTPLITKADGSKFGKSE 239

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAK 299
            G +WL+ + TS Y F+Q+W N  DAD   + K  T L    ID +         +   +
Sbjct: 240 GGNVWLDADKTSVYKFYQFWVNATDADAEKYIKIFTFLDKETIDALIAEHQTAPHLRILQ 299

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDE 345
           K +A EIT  VH +EE EKA  A+   F  S                   +P   I+K +
Sbjct: 300 KKLAEEITIFVHSKEELEKAIQASNILFGNSTADDLKKLDEKTFLEVFDGVPQAEIAKAD 359

Query: 346 VSRGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           +  G+ ++T++ +  GF  S  EARR L +N+I +N   I  E   +   D  +   + L
Sbjct: 360 LENGLDIVTVLNEKTGFFKSNGEARRALTANSISVNREKIK-EDFVLTANDLINNQFVLL 418

Query: 405 SFGKKNHIICHLC 417
             GKKN+ +  + 
Sbjct: 419 QSGKKNYFVIRVV 431


>gi|295105579|emb|CBL03123.1| tyrosyl-tRNA synthetase [Faecalibacterium prausnitzii SL3/3]
          Length = 406

 Score =  466 bits (1200), Expect = e-129,   Method: Composition-based stats.
 Identities = 171/391 (43%), Positives = 245/391 (62%), Gaps = 7/391 (1%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG + QI++   +D L + G  T YIG+D TA SL AGH   L L+  LQ  G
Sbjct: 3   LYEELKARGLVAQITDEEIID-LINNGKATFYIGFDCTADSLTAGHFLALTLMKRLQLAG 61

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           +KPI+L+GGGT++IGDPS R + R+M+   +I  N    K     FI +  GK  ALMLN
Sbjct: 62  NKPIALIGGGTTMIGDPSGRTDMRKMLTKDDIAHNAACFKKQMEKFIDFSEGK--ALMLN 119

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  + Y++LLRE+G+ FSVN ML  E  + R+  E+ LSFLEFNYMI+Q+YDF  +
Sbjct: 120 NADWLLDLNYVELLREVGACFSVNNMLRAECYKQRM--EKGLSFLEFNYMIMQSYDFYYM 177

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            ++Y C +Q GG DQW N++ G +L  R      +A+T  LLT + G KMGKT   A+WL
Sbjct: 178 FQHYGCNMQFGGDDQWSNMLGGTELIRRKLGKDAYAMTVTLLTDSQGKKMGKTAGNAVWL 237

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           +   TSP+ F+QYWRN+ DADV+   + LT LP+ +ID M+  Q + +NEAK+I+A E+T
Sbjct: 238 DPNKTSPFEFYQYWRNVGDADVMKCIRMLTFLPLEQIDEMSTWQDQRLNEAKEILAYEMT 297

Query: 308 TMVHGREEAEKAATAAMECFDMSI-HSQHMPTISISKDEVSRG-MGLLTLIVKAGFATST 365
           +MVHG+EEAEKA  AA   F  +   ++HMP+  +++ +++ G +G+LTL+VKAG A S 
Sbjct: 298 SMVHGKEEAEKAQNAARALFSGNAMDTEHMPSTQLTEADLTDGAIGILTLMVKAGLAASN 357

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
            EARR +    +  +   ++   +    +  
Sbjct: 358 GEARRLVVQGGVLADGEKVAAPTVSFTAEQL 388


>gi|197105298|ref|YP_002130675.1| tyrosyl-tRNA synthetase [Phenylobacterium zucineum HLK1]
 gi|196478718|gb|ACG78246.1| tyrosyl-tRNA synthetase [Phenylobacterium zucineum HLK1]
          Length = 418

 Score =  466 bits (1199), Expect = e-129,   Method: Composition-based stats.
 Identities = 204/414 (49%), Positives = 285/414 (68%), Gaps = 1/414 (0%)

Query: 2   PAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
           PAFKS+FL  L  RG+IHQIS+P+ELD   + GV+ AYIG+D TA+SLH G L Q+M+L 
Sbjct: 4   PAFKSEFLKTLQARGYIHQISHPQELDEATAGGVIAAYIGFDATATSLHVGSLIQIMMLR 63

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKT 121
            LQ+ GHKP+ LMGGGT+ +GDPS RDESR+M+   +I+ NI  I+ +F  F+ +G G T
Sbjct: 64  RLQQAGHKPVVLMGGGTTKVGDPSGRDESRKMLTDADIERNIAGIRTVFEKFLTFGNGPT 123

Query: 122 DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA 181
           DA+M+NN+ WL  + Y++ LRE G  F+VNRML+F+SVR RL+REQ L+FLEFNYM++QA
Sbjct: 124 DAVMVNNDAWLSKLGYLEFLREYGPHFTVNRMLTFDSVRLRLEREQPLTFLEFNYMLMQA 183

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            DF  L +    +LQMGGSDQWGNII G++L  R+     FALT+PLLTT+SG KMGKT 
Sbjct: 184 VDFRHLNRTMGVQLQMGGSDQWGNIINGVELVRRMDQKAAFALTTPLLTTSSGAKMGKTA 243

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKI 301
            GA+WLN ++ SPY++WQ+WRN +DADV  F +  T LP+ EI R+  L+G +IN+AKK+
Sbjct: 244 QGAVWLNADLLSPYDYWQFWRNTEDADVGRFLRLFTDLPLDEIARLEALEGAQINDAKKV 303

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGF 361
           +A E T M+HG E A  A  AA   F+    S  +PT  +++ +++ G+ L  L   AG 
Sbjct: 304 LANEATRMLHGEEAARAAEAAARAAFEEGRLSGDLPTHEVARADLAAGIALAALAADAGL 363

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           A+S  EARR  +   +++N++  ++    +   D    G +KL+ GKK  ++  
Sbjct: 364 ASSRGEARRLAQGGGLRVNDAQETDGARLVSEADLV-DGVVKLAAGKKKIVLVK 416


>gi|239905130|ref|YP_002951869.1| tyrosyl-tRNA synthetase [Desulfovibrio magneticus RS-1]
 gi|239794994|dbj|BAH73983.1| tyrosyl-tRNA synthetase [Desulfovibrio magneticus RS-1]
          Length = 425

 Score =  466 bits (1199), Expect = e-129,   Method: Composition-based stats.
 Identities = 153/423 (36%), Positives = 225/423 (53%), Gaps = 14/423 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    LS RG +HQ S+  EL    S      Y G+D TA SLH G+L  LM L    K 
Sbjct: 2   NIFDELSWRGLVHQCSDEAELRKHLSSRDRVMYCGFDPTADSLHIGNLVPLMALARFAKA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP+ L+GG T +IGDPS +D+ R+M  +  +  + EKI+    +F +          +
Sbjct: 62  GHKPLFLLGGATGLIGDPSGKDKERQMRTADMVAASAEKIRSQAMAFFERQGVADRVTPV 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDFV 185
           NN  W   I  I+ LR+ G  F++N M++ +SV+SR+ RE   +S+ EF+YMILQ+ D+ 
Sbjct: 122 NNLDWTQPISVIEFLRDTGKHFTINYMMAKDSVKSRIGREDTGISYTEFSYMILQSLDYE 181

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L +   C LQ+GG DQ+GNI  G++L  R    + FALT PL+TTA+G K GK+  GAI
Sbjct: 182 YLNRTMGCTLQIGGGDQFGNITAGLELIRRKSGSQAFALTFPLITTATGAKFGKSEKGAI 241

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIA 303
           +LN  +TSPY F+QYW N DD DV +F +  T L    ID +A    +   +  A+K +A
Sbjct: 242 YLNTALTSPYAFYQYWINADDRDVCNFLRYFTYLSKEAIDALAVETAERPHLRAAQKTLA 301

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISI----------SKDEVSRGMGLL 353
            E TTM+HG EE  K        F      + +   ++          + D +     L 
Sbjct: 302 RETTTMIHGAEELAKVEAVTEALFGGGDL-RTVDAATLRAALDAAPGKNYDALDVVPPLP 360

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            L+V      S ++AR+ +K+  I +NN  +++E   +   D+       L  GKKN+ +
Sbjct: 361 KLLVDLALCPSLSQARKDIKAGGIYLNNVRVADENQTLAASDYIGGNIALLRKGKKNYGV 420

Query: 414 CHL 416
             L
Sbjct: 421 VTL 423


>gi|260102211|ref|ZP_05752448.1| tyrosine-tRNA ligase [Lactobacillus helveticus DSM 20075]
 gi|260083982|gb|EEW68102.1| tyrosine-tRNA ligase [Lactobacillus helveticus DSM 20075]
          Length = 420

 Score =  466 bits (1199), Expect = e-129,   Method: Composition-based stats.
 Identities = 148/423 (34%), Positives = 211/423 (49%), Gaps = 17/423 (4%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQ-GVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           K D L  L  RG I+Q ++   L +  ++   +  Y G D T  SLH GHL   M+L   
Sbjct: 3   KFDILEDLKWRGAINQETDEEGLRMYLAEHDDLALYCGTDPTGDSLHIGHLIPFMILKRF 62

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q   + P+ L+GGGT  IGDPS R   R +  + +++ N E +            G  + 
Sbjct: 63  QMASYHPVILIGGGTGAIGDPSGRKTERTLQTADQVKHNEECLTNQMKKLF----GTENF 118

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            + NN  WL  +  ID LR+ G FF VN M++ + V SRL  E  +SF EF Y ILQA D
Sbjct: 119 EIRNNAEWLGKLNLIDFLRDYGKFFQVNNMINKDVVASRL--ENGISFTEFTYQILQAID 176

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTL 241
           F  L K+   +LQ+GGSDQWGNI  GIDL  +L+      F LT PL+  A GTK GK+ 
Sbjct: 177 FYHLNKDDGVQLQIGGSDQWGNITAGIDLIHKLEGADRPAFGLTIPLMLKADGTKFGKSA 236

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAK 299
            GA+WL+ E TSPY F+Q+W N DD DVV + K  T L   EI+ +A+   KE     A+
Sbjct: 237 GGAVWLDPEKTSPYEFYQFWINQDDRDVVKYLKYFTFLSREEIEDLAEKTEKEPWKRAAQ 296

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRGMGLL 353
           K +A E+T  VHG    ++A       F  +I +  +  I        S +  S    L+
Sbjct: 297 KRLAEEVTKFVHGEAGLKEAQMITDALFSGNIKNLSVTQIEQGLKNAPSAEAGSEKKNLV 356

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
             +V      S  +AR  +K+ AI +N     +    +          + +  GK+ + +
Sbjct: 357 DFLVDTKIEPSKRQAREDIKNGAIYVNGDREQSVDFDVDPSSAFDGKYVIIRKGKRKYTL 416

Query: 414 CHL 416
             +
Sbjct: 417 VTI 419


>gi|227545498|ref|ZP_03975547.1| tyrosine--tRNA ligase [Lactobacillus reuteri CF48-3A]
 gi|300908935|ref|ZP_07126398.1| tyrosine--tRNA ligase [Lactobacillus reuteri SD2112]
 gi|227184519|gb|EEI64590.1| tyrosine--tRNA ligase [Lactobacillus reuteri CF48-3A]
 gi|300894342|gb|EFK87700.1| tyrosine--tRNA ligase [Lactobacillus reuteri SD2112]
          Length = 420

 Score =  466 bits (1199), Expect = e-129,   Method: Composition-based stats.
 Identities = 153/420 (36%), Positives = 225/420 (53%), Gaps = 16/420 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D L+ L  RG I+Q+++   L  L S+  +  Y G D T  SLH GHL   M+L   Q  
Sbjct: 6   DILNELEWRGAINQVTDEEGLRKLTSEDKIALYCGTDPTGDSLHIGHLIPFMILKRFQLA 65

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P+ ++GGGT  IGDPS R   R++    ++  N E +            G  +  ++
Sbjct: 66  GHHPVIIIGGGTGAIGDPSGRKSERQLQTMDQVHHNEEALTAQMKKLF----GTENFTIV 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  I  +D LR+ G  F++N ML+ E V SRL     +SF EF Y ILQ+ DF+ 
Sbjct: 122 NNYEWLSKISLLDFLRDYGKLFNINTMLNKEVVASRLDA--GISFTEFTYQILQSVDFLH 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKLFALTSPLLTTASGTKMGKTLSGA 244
           L ++ D +LQ+GGSDQWGNI  GIDL  +++    K++ LT PL+  A GTK GKT  GA
Sbjct: 180 LYRHNDVQLQIGGSDQWGNITAGIDLIHKVEGSDTKVYGLTIPLMLKADGTKFGKTAGGA 239

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKII 302
           IWL+ E TSPY F+Q+W N DD DV+ + K  T L   EID +A+   KE    EA++ +
Sbjct: 240 IWLDPEKTSPYEFYQFWINQDDRDVIKYLKYFTFLSKEEIDDLAEKVEKEPWKREAQRRL 299

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRGMGLLTLI 356
           A E+T  VHG+E  E+A   +   F   +    +  I        S D  ++   ++  +
Sbjct: 300 AQEVTKFVHGQEAVEEAERISKALFSGDVTDLSVAEIEQGFKNMPSVDVENKKENIVLWL 359

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
              G  +S  +AR+ + S AI+IN   + +   +I  Q       + +  GKK++ +  +
Sbjct: 360 TDNGIESSRRQARQDVSSGAIRINGEKVDDVDAEIDPQAHFDGKFVIVRKGKKHYYLARV 419


>gi|15827703|ref|NP_301966.1| tyrosyl-tRNA synthetase [Mycobacterium leprae TN]
 gi|221230180|ref|YP_002503596.1| tyrosyl-tRNA synthetase [Mycobacterium leprae Br4923]
 gi|13432213|sp|Q49900|SYY_MYCLE RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|2065227|emb|CAB08289.1| TyrS [Mycobacterium leprae]
 gi|13093254|emb|CAC31733.1| tyrosyl-tRNA synthase [Mycobacterium leprae]
 gi|219933287|emb|CAR71447.1| tyrosyl-tRNA synthase [Mycobacterium leprae Br4923]
          Length = 426

 Score =  466 bits (1199), Expect = e-129,   Method: Composition-based stats.
 Identities = 143/419 (34%), Positives = 230/419 (54%), Gaps = 16/419 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S  L+ L  RG + Q ++   L     +G +T Y G+D TA SLH GHL  L++L   Q+
Sbjct: 3   SSILNELGWRGLVAQSTDLDALADELRRGPMTVYAGFDPTAPSLHVGHLVPLLVLRRFQR 62

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT---GKTD 122
            GH+PI L GG T +IGDP    E R +  +  + E  E+I+G    F+++      +  
Sbjct: 63  AGHRPIVLAGGATGMIGDPRDIGE-RTLNEAYTVAEWAERIRGQLERFVEFDDVAKSRNG 121

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
           A+++NN  W   +  I+ LR++G  FS+N ML  +++R RL   Q +S+ EF+YM+LQA 
Sbjct: 122 AIVVNNLEWTSPMSAIEFLRDVGKHFSINLMLDRDTIRRRL-NGQGISYTEFSYMLLQAN 180

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT-L 241
           D+ EL + + C LQ+GGSDQWGNII G+ L  +     + ALT PL+T A G K+GK+  
Sbjct: 181 DYAELHQRHGCALQIGGSDQWGNIIAGVRLVRQKLGATVHALTVPLVTAADGAKLGKSTG 240

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAK 299
            G++WL+ EMTSPY ++QY+ N  DADV+ + +  T L   E+  + +  +   +   A+
Sbjct: 241 GGSLWLDPEMTSPYAWYQYFINTSDADVIRYLRWFTFLLPEELVELEQTTVSRPQERAAQ 300

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQ--------HMPTISISKDEVSRGMG 351
           + +ATE+T +VHG    +    A+   F     ++         +    +++ +     G
Sbjct: 301 RRLATELTVLVHGAAATQAVEHASRALFGQGELARLDEATLATALRETVVAELKPGNPDG 360

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
           ++ L+V +G + S   ARR +    + +NN  I +E+   +  DF     + L  GK+N
Sbjct: 361 IVDLLVASGLSPSRGAARRTIDEGGVLVNNIRIQSEEWTPRTSDFLHGRWLVLRRGKRN 419


>gi|320527328|ref|ZP_08028513.1| tyrosyl-tRNA synthetase [Solobacterium moorei F0204]
 gi|320132352|gb|EFW24897.1| tyrosyl-tRNA synthetase [Solobacterium moorei F0204]
          Length = 415

 Score =  466 bits (1199), Expect = e-129,   Method: Composition-based stats.
 Identities = 137/417 (32%), Positives = 226/417 (54%), Gaps = 14/417 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG +   ++   L     +   T Y G+D TA SLH GHL Q++LL   Q  
Sbjct: 2   NFIEELQWRGLVKDCTDKEGLGEQL-KNPTTIYCGFDPTADSLHVGHLQQILLLRRYQLQ 60

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI+L GG T +IGDP      R+++  +E+  N E I+   + F+ +  G   A+M 
Sbjct: 61  GHQPIALCGGFTGMIGDPRP-TTERKLLTHEEVLHNAECIREQLAKFLSF-EGSNAAIME 118

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  +  +D LR+ G  F+++ ML  ++++ RL     +S+ EF+Y ILQ+ D+  
Sbjct: 119 NNNNWLGEMHLLDFLRDYGKLFNISYMLQKDTIKKRLDS--GISYTEFSYTILQSIDWYN 176

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKLFALTSPLLTTASGTKMGKTLSGA 244
           L K Y+C++Q+GGSDQWGN+  G++L  +++    K+F +TSPL+T + G+K GK+    
Sbjct: 177 LFKKYNCQIQIGGSDQWGNLTSGMELIRKMEGDNAKVFGITSPLITKSDGSKFGKSEGKN 236

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKII 302
           IWL+   T+ Y F+Q+W N  DAD+V + KRL+     EI    +      E  E +K +
Sbjct: 237 IWLDPARTNAYEFYQFWLNTPDADIVDYLKRLSFHTPEEIMGYEESLKNAPEKREGQKAL 296

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSI---HSQHMPT--ISISKDEVSRGMGLLTLIV 357
           A E+T +VHG++  +KA       F   I     + M        K  V  G+ L+  +V
Sbjct: 297 AAELTELVHGKDGLKKALRITETFFKGDIMTLSPEEMKEGLADAKKAAVEDGVTLIDALV 356

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            A    S +EAR+ ++  ++ +N + +++ +  +   +  +     L  GKKN+ + 
Sbjct: 357 TAEVCKSKSEARKLIEQGSVSVNGNKVTDIQAVLHQSEAINQEFSILKKGKKNYFVL 413


>gi|85858578|ref|YP_460780.1| tyrosyl-tRNA synthetase [Syntrophus aciditrophicus SB]
 gi|97202272|sp|Q2LR98|SYY_SYNAS RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|85721669|gb|ABC76612.1| tyrosyl-tRNA synthetase [Syntrophus aciditrophicus SB]
          Length = 428

 Score =  465 bits (1198), Expect = e-129,   Method: Composition-based stats.
 Identities = 168/429 (39%), Positives = 255/429 (59%), Gaps = 23/429 (5%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
            +   +  ERGFI Q+++   +     +  +  YIG+D TA SLH G L  +M L  LQ+
Sbjct: 4   KNVYDVFMERGFIEQVTDENAVRKAL-EAPLACYIGFDPTARSLHIGSLVPIMALIHLQR 62

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH  I+L+GGGT++IGDPS + E R+++  ++I+ N   ++  F+ ++ +   K  A+M
Sbjct: 63  HGHTSIALVGGGTALIGDPSGKTEMRQILTREKIELNATCMRRQFARYLSFEDKK--AMM 120

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  WL  + YI  LR+IG  FSVN+ML+ ES + RL  E+ L+F+EFNYM+LQAYDF+
Sbjct: 121 INNADWLTKLNYISFLRDIGRHFSVNKMLAAESYKMRL--EKGLNFIEFNYMLLQAYDFL 178

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L +N++C +QMGG+DQWGN++ G+DL  R++     ++T PLLTTA+G KMGKT  GA+
Sbjct: 179 YLFQNHNCVMQMGGNDQWGNMLAGVDLIRRVEGKVAHSMTFPLLTTATGQKMGKTEKGAV 238

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
           WL++E+TSPY ++QYW N  D DV  F    T LPM EI ++  L  KE+N AK I+A E
Sbjct: 239 WLDRELTSPYEYYQYWINTGDIDVGKFLALFTFLPMEEIHQVKSLSDKELNMAKAILAFE 298

Query: 306 ITTMVHGREEAEKAATAAMECF------------------DMSIHSQHMPTISISKDEVS 347
            T + HG + A  A  A+   F                   +S  +  +P I  S +E++
Sbjct: 299 ATKITHGEDAALAAWNASAVAFGVKLIDTSLMPSSTIPRGQLSQDASAIPFIKKSWNELA 358

Query: 348 RGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFG 407
           +G+    ++ + G  +S +EARR +      +N + I      I  +  D +G IKL  G
Sbjct: 359 KGIPAYEIMHECGLCSSKSEARRLIAQGGGYVNENPIFAFDELITTEHLDRSGQIKLRKG 418

Query: 408 KKNHIICHL 416
           KK ++I  +
Sbjct: 419 KKKYMIIKV 427


>gi|118590759|ref|ZP_01548160.1| Tyrosyl-tRNA synthetase, class Ib [Stappia aggregata IAM 12614]
 gi|118436735|gb|EAV43375.1| Tyrosyl-tRNA synthetase, class Ib [Stappia aggregata IAM 12614]
          Length = 425

 Score =  465 bits (1198), Expect = e-129,   Method: Composition-based stats.
 Identities = 197/413 (47%), Positives = 273/413 (66%), Gaps = 3/413 (0%)

Query: 2   PAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
              KS+ L++L ERG +HQ ++   LD   SQG +TAY G+D TA+SLH GHL  LM + 
Sbjct: 13  TKLKSEALAVLLERGLVHQCTDIEALDQTLSQGPITAYAGFDATAASLHVGHLMPLMTMR 72

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKT 121
           WLQK GH+PI ++GGGTS IGDPSFR ++R M+  ++I  NI  I+      +    G+ 
Sbjct: 73  WLQKLGHRPIVVLGGGTSQIGDPSFRKDARPMLEERQIAANIATIRRSVERLVDMN-GED 131

Query: 122 DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA 181
            AL+++N  WL   ++++ LR+ GS F+VNRM++F+SV+SRL  +  L+ LEF YM+LQA
Sbjct: 132 GALLVDNAEWLNEFRFLEFLRDYGSQFTVNRMMTFDSVKSRLDAQMPLTVLEFCYMMLQA 191

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            DF+ELAK YDC LQ+GGSDQWGNI+ G++LG R    KL  LT PLLTTASG KMGKT 
Sbjct: 192 VDFLELAKRYDCSLQVGGSDQWGNIVNGVELGRR-DGRKLHGLTVPLLTTASGAKMGKTA 250

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKI 301
           +GA+WL+ E  SP+ FWQ+WRN  DADV    +  T LPMSEI+R+A L+G E+NEAKKI
Sbjct: 251 AGAVWLHPEHLSPFGFWQFWRNTADADVAKCLRLFTELPMSEIERLAALEGAELNEAKKI 310

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGF 361
           +AT++T +VHG EEA  A       F         PT S+    ++ G+GLL L+V  GF
Sbjct: 311 LATQVTAIVHGPEEARGALQQGDALFSGEGEILE-PTHSLPLKTLAEGLGLLELVVAVGF 369

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           A+S  EARR ++   +++NN I+ + + +I   D  +   + +S GK+   + 
Sbjct: 370 ASSNGEARRLVEGGGVRLNNQILDDPRRRIATGDLQANDRLSISVGKRRKALI 422


>gi|224501460|ref|ZP_03669767.1| tyrosyl-tRNA synthetase [Listeria monocytogenes FSL R2-561]
          Length = 396

 Score =  465 bits (1198), Expect = e-129,   Method: Composition-based stats.
 Identities = 150/394 (38%), Positives = 209/394 (53%), Gaps = 21/394 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG I+Q ++   L     +  ++ Y G D +  S+H GHL   M+L   Q  
Sbjct: 2   NIIDELEWRGAIYQQTDEEGLRKWVEEKQISLYCGIDPSGDSMHIGHLIPFMILRRFQNA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI L+GG T  IGDPS + E R++   ++I +N+E ++        +  G + A M+
Sbjct: 62  GHRPIILVGGATGTIGDPSGKKEERKLQSMEQISKNVESLRVQLGKIFDF-EGNSAASMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   +  +D LR+ G  F+VN MLS + V SRL  E  +SF EF Y ILQA DF  
Sbjct: 121 NNYDWTKDVSILDFLRDYGKEFNVNTMLSKDIVASRL--EVGISFTEFAYQILQAMDFNH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSGA 244
           L +  DCRLQ+GGSDQWGNI  G+DL  + +    K F LT PLLT A GTK GK+  GA
Sbjct: 179 LYEFNDCRLQIGGSDQWGNITAGLDLIRKKQGENAKAFGLTIPLLTKADGTKFGKSEGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKII 302
           IWLN E T+PY F+Q+W N DD DVV + K  T L  +EID +AK       +  A+K +
Sbjct: 239 IWLNPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLTEAEIDELAKQVETEPHLRAAQKTL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGL 352
           A E+T  VH  E  E+A   +   F   + +          + +PT      E      L
Sbjct: 299 AAEMTKFVHSEEALEQALKISKALFSGDVKALTADEIEQGFKDVPTFVAEDSE----ANL 354

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISN 386
           +  +V  G   S  +AR  + + AI IN     +
Sbjct: 355 VDWLVTLGIEPSKRQAREDVGNGAIYINGERQQD 388


>gi|254421077|ref|ZP_05034801.1| tyrosyl-tRNA synthetase [Brevundimonas sp. BAL3]
 gi|196187254|gb|EDX82230.1| tyrosyl-tRNA synthetase [Brevundimonas sp. BAL3]
          Length = 417

 Score =  465 bits (1198), Expect = e-129,   Method: Composition-based stats.
 Identities = 200/413 (48%), Positives = 271/413 (65%), Gaps = 2/413 (0%)

Query: 3   AFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
           AFKSDFL  L  RG+IHQI++P ELD   + GVV  YIG+D TA SLH G L Q+M+L  
Sbjct: 5   AFKSDFLRTLQARGYIHQITHPVELDAAAADGVVAGYIGFDATAPSLHVGSLIQIMMLRR 64

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD 122
           LQ+ G KPI LMGGGT+ +GDP+ +D SR  +  + IQ NI+ IK +F+ F+ +G G TD
Sbjct: 65  LQQAGGKPIVLMGGGTTKVGDPTGKDTSRPQLTEETIQSNIDSIKTVFAKFLTFGDGPTD 124

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
           A+M+NN+ WL    YI  LR+ G+ F+VNRMLSF+SV+ RL+REQ ++FLEFNYM++Q+ 
Sbjct: 125 AVMVNNDDWLSGYGYIQFLRDFGTHFTVNRMLSFDSVKLRLEREQPMTFLEFNYMLMQSV 184

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DF+EL +     LQMGGSDQWGNI  G+DL  R+     F LT+PLLTTASG KMGKT  
Sbjct: 185 DFLELNRALKVTLQMGGSDQWGNITSGVDLVRRVDQKAAFGLTTPLLTTASGGKMGKTAQ 244

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKII 302
           GA+WLN E  SPY++WQ+WRN +DADV  F +  T L + +I     L+G  IN+AKK +
Sbjct: 245 GAVWLNAEQLSPYDYWQFWRNAEDADVGRFMRLFTDLSLEQIAEYEALEGAAINDAKKAL 304

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFA 362
           A   TT++HG EEA KA  AA   F+    S  +PT+ +   EV  G  +  ++ KAG  
Sbjct: 305 ADAATTLLHGAEEAAKARAAAETAFEKGQVSADLPTVELPVAEV-YGAMIAAVVTKAGLT 363

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            S  EARR  +   +++N++ +++    +   D    G IKL+ GKK  ++  
Sbjct: 364 ASNGEARRLAQGGGLRLNDAAVADGAQLLTQADL-KDGVIKLAAGKKKIVLVR 415


>gi|282879066|ref|ZP_06287826.1| tyrosine--tRNA ligase [Prevotella buccalis ATCC 35310]
 gi|281298800|gb|EFA91209.1| tyrosine--tRNA ligase [Prevotella buccalis ATCC 35310]
          Length = 433

 Score =  465 bits (1198), Expect = e-129,   Method: Composition-based stats.
 Identities = 141/434 (32%), Positives = 222/434 (51%), Gaps = 27/434 (6%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
            +F+  L  RG + Q+    E   L  + +V+AY+G D TA SLH GHL  +M+L  LQ+
Sbjct: 3   KNFVEELKWRGMLAQMMPGTE--ELLEKELVSAYLGTDPTADSLHIGHLCGIMMLRHLQR 60

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG-TGKTDAL 124
            GHKP  L+GG T +IGDPS +   R ++ +  +  N E IK   S F+ +       A 
Sbjct: 61  CGHKPYLLLGGATGMIGDPSGKSLERNLLDTDTLYHNQEAIKQQVSKFLDFDGDTPNKAE 120

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQAY 182
           ++NN  W+    ++D  RE+G   +VN M++ +SV+ RL  E    LSF EF Y +LQ Y
Sbjct: 121 LVNNYDWMKDFTFLDFAREVGKHITVNYMMAKDSVKKRLNGEASDGLSFTEFTYQLLQGY 180

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK--LFALTSPLLTTASGTKMGKT 240
           DF+ L + +  +LQ+GG+DQWGN+  G +L  R    +   + LT PL+T A G K GKT
Sbjct: 181 DFLHLYQKHGIKLQLGGNDQWGNMTTGTELIRRTLGAEENAYCLTCPLITKADGKKFGKT 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEA 298
            +G IWL++  T+PY F+Q+W N+ D D   + K  T+L    I+ +     ++      
Sbjct: 241 ENGNIWLDRNRTTPYAFYQFWLNVSDDDAEKYIKIFTSLERETIEALVAEHQQDPGRRVL 300

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQ--------------HMPTISISKD 344
           +K +A E+T MVH +E+ + A  A+   F  +                   +P   I K+
Sbjct: 301 QKRLAEEVTVMVHSQEDLDMAIEASNILFGKATKESLRKLDEATFLDVFNGVPQYEIDKN 360

Query: 345 EVSRGMGLLTLIVKAG--FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNI 402
           ++  G   + L  + G     S  E R+ +K   + +N   +S+    I   D      +
Sbjct: 361 QL--GSTAVDLFNQEGMEMFPSKGEMRKLVKGGGVSLNKEKLSSFDQVITADDLIDGKYL 418

Query: 403 KLSFGKKNHIICHL 416
            +  GKKN+ +  +
Sbjct: 419 LVQRGKKNYFLITV 432


>gi|254228073|ref|ZP_04921503.1| tyrosyl-tRNA synthetase [Vibrio sp. Ex25]
 gi|262395949|ref|YP_003287802.1| tyrosyl-tRNA synthetase [Vibrio sp. Ex25]
 gi|151939569|gb|EDN58397.1| tyrosyl-tRNA synthetase [Vibrio sp. Ex25]
 gi|262339543|gb|ACY53337.1| tyrosyl-tRNA synthetase [Vibrio sp. Ex25]
          Length = 419

 Score =  465 bits (1198), Expect = e-129,   Method: Composition-based stats.
 Identities = 157/422 (37%), Positives = 228/422 (54%), Gaps = 24/422 (5%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L +RG I Q S+  E+  L SQ   T Y G+D TA SLH GHL  L++L   Q  G
Sbjct: 5   LLQDLQDRGLIAQASDLEEIQTLLSQ-PQTVYCGFDPTAGSLHIGHLVPLIMLKRFQDAG 63

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+ I+L+GG T +IGDPSF+   R +   + +   +  +       + +   K    M+N
Sbjct: 64  HQAIALIGGATGMIGDPSFKATERSLNSKEIVSGWVNDLSNQIQQLMNHQLAKPMI-MVN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDFVE 186
           N  W+ +I  ID  R++G  FS+N M++ ESV+ RL+R +Q +SF EF+Y +LQ+YDF E
Sbjct: 123 NADWMKAINVIDFFRDVGKHFSINTMINRESVKQRLQRPDQGISFTEFSYALLQSYDFAE 182

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + YDCRLQ+GG+DQWGNI+ GIDL  R    ++F LT PL+T + G+K GKT  GA+W
Sbjct: 183 LNRQYDCRLQIGGNDQWGNIVGGIDLTRRQNGEQVFGLTLPLITKSDGSKFGKTEGGAVW 242

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE--INEAKKIIAT 304
           L+   TSPY F+Q+W   +DADV  F +  T L   EI  +           +A++I+A 
Sbjct: 243 LDPSKTSPYAFYQFWLGAEDADVYHFLRYYTFLSCEEIASIEAQDQASQGKPQAQRILAE 302

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHS-----------QHMPTISISKDEVSRGMGLL 353
           E+T  VHG E    A       F  ++               +P+I       S    L+
Sbjct: 303 EMTRFVHGEEGLASAERITQALFSGNMQQLSLGELKQLELDGLPSIE------SAQQDLV 356

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            L+V++G A+S   AR H+ +NAI +N   +S +   +    FD      L  GKK+  +
Sbjct: 357 ELLVESGLASSKRVAREHISNNAISVNGEKVSADNPSLSFPLFD--QYWLLQRGKKHFCL 414

Query: 414 CH 415
             
Sbjct: 415 VK 416


>gi|298206911|ref|YP_003715090.1| tyrosyl-tRNA synthetase [Croceibacter atlanticus HTCC2559]
 gi|83849545|gb|EAP87413.1| tyrosyl-tRNA synthetase [Croceibacter atlanticus HTCC2559]
          Length = 431

 Score =  465 bits (1198), Expect = e-129,   Method: Composition-based stats.
 Identities = 151/434 (34%), Positives = 236/434 (54%), Gaps = 23/434 (5%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
            K++F++ ++ RG +H +    E  +L  +    AYIG+D TA SLH G L Q+++L   
Sbjct: 1   MKTNFVAEMTWRGMLHDVMPGTEEQLL--KEPTAAYIGFDPTADSLHIGSLVQIVILMHY 58

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG-KTD 122
           Q+ GH PI+L+GG T +IGDPS +   R ++  + + +N+  IK   S F+ +    +  
Sbjct: 59  QRAGHIPIALVGGATGMIGDPSGKSAERNLLDEEALAKNVAGIKEQLSRFLDFSENSENK 118

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ--SLSFLEFNYMILQ 180
           A ++NN  W+    +I+  R+IG   +VN M++ +SV+ RL  E    +SF EF Y + Q
Sbjct: 119 AELVNNYDWMKDFSFIEFARDIGKHITVNYMMAKDSVKKRLSSESTVGMSFTEFTYQLFQ 178

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
            YDF+ L +  +C LQ+GGSDQWGNI  G +L  R+   K +A+TSPLLT A GTK GKT
Sbjct: 179 GYDFLHLYREKNCLLQLGGSDQWGNITTGTELVRRVAGGKAYAMTSPLLTKADGTKFGKT 238

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEA 298
             G +WL+K  TSPY F+QYW N  D D  +F K  T L   EI    +   +   +   
Sbjct: 239 EGGNVWLDKNRTSPYKFYQYWVNATDEDAENFIKIFTFLSQEEISELVLKHNEAPHLRLL 298

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKD 344
           +K +A  +T MVHG+E+ + A  A+   F  +  +              + +    ISK 
Sbjct: 299 QKTLAEHVTKMVHGQEDLDNAIKASQVLFSKTFKNDISQLDEATFLDVFEGVSQTEISKA 358

Query: 345 EVSRGMGLLTLI-VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
           ++  G+ ++  +  +  F  S  EARR LK+N++ +N   ++ E   +   D  +   + 
Sbjct: 359 KLEEGLDMIAALSAETNFLKSNGEARRALKANSVAVNKEKVT-EAYTLTTDDIINDNYVI 417

Query: 404 LSFGKKNHIICHLC 417
           L+ GKKN  I  + 
Sbjct: 418 LNVGKKNTYILKVS 431


>gi|258646957|ref|ZP_05734426.1| tyrosine--tRNA ligase [Dialister invisus DSM 15470]
 gi|260404396|gb|EEW97943.1| tyrosine--tRNA ligase [Dialister invisus DSM 15470]
          Length = 417

 Score =  465 bits (1197), Expect = e-129,   Method: Composition-based stats.
 Identities = 143/419 (34%), Positives = 212/419 (50%), Gaps = 14/419 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG I+Q ++   L  L  Q  ++ Y G D T  S+H GHL   M+L   Q  
Sbjct: 2   NIIDELEWRGAINQQTDAEGLYKLVDQKSISLYCGIDPTGDSMHIGHLIPFMILKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P+ L+GGGT  IGDPS R   R +  +++++ N + +        K         M+
Sbjct: 62  GHHPVILIGGGTGAIGDPSGRTTERVLQTAEQVKHNADSLTAQMK---KLFGEDGSFTMM 118

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  I  +D LR+ G  F++N ML+ + V SR+  E  +SF EF+Y ILQ+ D+  
Sbjct: 119 NNYDWLSKISLLDFLRDYGKLFNINTMLAKDVVASRM--ETGISFTEFSYQILQSIDYKM 176

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERL-KTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           L +    +LQ+GG+DQWGNI  GI+L  +  +T + F LT PL+  A GTK GKT  GA+
Sbjct: 177 LYEKCGVQLQIGGADQWGNITNGIELIRKTNETHEAFGLTIPLMLKADGTKFGKTAGGAV 236

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIA 303
           WL+ + TSPY F+Q+W N DD DVV + K  T L   EID + K          A+K +A
Sbjct: 237 WLDPKKTSPYEFYQFWFNQDDRDVVKYLKYFTFLTKEEIDTLDKEVQAHPENRTAQKRLA 296

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG------MGLLTLIV 357
            E+T  VHG     +A       F   I       I  +      G      + ++  +V
Sbjct: 297 EEVTRFVHGEAGLAQALKVTAALFSGDIAELTGEEIEGAFRNTKGGEVAFAPVNIVDALV 356

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +AG   S  +AR  + + A+++N   I + +  I      +   I +  GKKN+    +
Sbjct: 357 EAGVEKSKRQAREDITNGAVRVNGMQIKDTEASISAHPNTNGRFIIIRKGKKNYFSIAV 415


>gi|269967210|ref|ZP_06181275.1| tyrosyl-tRNA synthetase [Vibrio alginolyticus 40B]
 gi|269828200|gb|EEZ82469.1| tyrosyl-tRNA synthetase [Vibrio alginolyticus 40B]
          Length = 419

 Score =  465 bits (1197), Expect = e-129,   Method: Composition-based stats.
 Identities = 152/422 (36%), Positives = 227/422 (53%), Gaps = 24/422 (5%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L +RG I Q S+  E+  L SQ   T Y G+D TA SLH GHL  L++L   Q  G
Sbjct: 5   LLQDLQDRGLIAQASDLEEIQTLLSQ-PQTVYCGFDPTAGSLHIGHLVPLIMLKRFQDAG 63

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+ ++L+GG T +IGDPSF+   R +   + +   +  +       + +   K    M+N
Sbjct: 64  HQAVALIGGATGMIGDPSFKATERSLNSEEIVSGWVNDLSNQIHQLMNHQLTKPMI-MVN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDFVE 186
           N  W+ +I  ID  R++G  FS+N M++ ESV+ RL+R +Q +SF EF+Y +LQ+YDF E
Sbjct: 123 NADWMKAINVIDFFRDVGKHFSINTMVNRESVKQRLQRPDQGISFTEFSYALLQSYDFAE 182

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + Y CRLQ+GG+DQWGNI+ GIDL  R    ++F LT PL+T + GTK GKT  GA+W
Sbjct: 183 LNRRYGCRLQIGGNDQWGNIVSGIDLTRRQNGEQVFGLTLPLITKSDGTKFGKTEGGAVW 242

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINEAKKIIAT 304
           L+   +SPY F+Q+W   +DADV  F +  T L   EI  +           +A++I+A 
Sbjct: 243 LDPSKSSPYAFYQFWLGAEDADVYHFLRYYTFLSCEEIASIEAQDQASQSKPQAQRILAE 302

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHS-----------QHMPTISISKDEVSRGMGLL 353
           E+T  VHG +    A       F  ++               +P+I       S    L+
Sbjct: 303 EMTRFVHGEDGLASAERITQALFSGNVQQLSLGELKQLELDGLPSIE------SAQQDLV 356

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            L++++G A+S   AR H+ +NAI +N   ++ +   +    FD      L  GKK+  +
Sbjct: 357 ELLIESGLASSKRVAREHISNNAISVNGEKVAADNPSLSFPLFD--QYWLLQRGKKHFCL 414

Query: 414 CH 415
             
Sbjct: 415 VK 416


>gi|29375234|ref|NP_814387.1| tyrosyl-tRNA synthetase [Enterococcus faecalis V583]
 gi|255971094|ref|ZP_05421680.1| tyrosyl-tRNA synthetase [Enterococcus faecalis T1]
 gi|255973706|ref|ZP_05424292.1| tyrosyl-tRNA synthetase [Enterococcus faecalis T2]
 gi|256617516|ref|ZP_05474362.1| tyrosyl-tRNA synthetase [Enterococcus faecalis ATCC 4200]
 gi|256761406|ref|ZP_05501986.1| tyrosyl-tRNA synthetase [Enterococcus faecalis T3]
 gi|256854506|ref|ZP_05559870.1| tyrosyl-t-RNA synthetase [Enterococcus faecalis T8]
 gi|256957502|ref|ZP_05561673.1| tyrosyl-tRNA synthetase [Enterococcus faecalis DS5]
 gi|256959767|ref|ZP_05563938.1| tyrosyl-tRNA synthetase [Enterococcus faecalis Merz96]
 gi|256964581|ref|ZP_05568752.1| tyrosyl-tRNA synthetase [Enterococcus faecalis HIP11704]
 gi|257077509|ref|ZP_05571870.1| tyrosyl-tRNA synthetase [Enterococcus faecalis JH1]
 gi|257080876|ref|ZP_05575237.1| tyrosyl-tRNA synthetase [Enterococcus faecalis E1Sol]
 gi|257083566|ref|ZP_05577927.1| tyrosyl-tRNA synthetase [Enterococcus faecalis Fly1]
 gi|257085990|ref|ZP_05580351.1| tyrosyl-tRNA synthetase [Enterococcus faecalis D6]
 gi|257089063|ref|ZP_05583424.1| tyrosyl-tRNA synthetase [Enterococcus faecalis CH188]
 gi|257415205|ref|ZP_05592199.1| tyrosyl-tRNA synthetase [Enterococcus faecalis AR01/DG]
 gi|257418251|ref|ZP_05595245.1| tyrosyl-tRNA synthetase [Enterococcus faecalis T11]
 gi|257420895|ref|ZP_05597885.1| tyrosyl-tRNA synthetase [Enterococcus faecalis X98]
 gi|294780714|ref|ZP_06746075.1| tyrosine--tRNA ligase [Enterococcus faecalis PC1.1]
 gi|300861931|ref|ZP_07108011.1| tyrosine--tRNA ligase [Enterococcus faecalis TUSoD Ef11]
 gi|81437350|sp|Q838D7|SYY1_ENTFA RecName: Full=Tyrosyl-tRNA synthetase 1; AltName:
           Full=Tyrosine--tRNA ligase 1; Short=TyrRS 1
 gi|29342693|gb|AAO80458.1| tyrosyl-tRNA synthetase [Enterococcus faecalis V583]
 gi|255962112|gb|EET94588.1| tyrosyl-tRNA synthetase [Enterococcus faecalis T1]
 gi|255966578|gb|EET97200.1| tyrosyl-tRNA synthetase [Enterococcus faecalis T2]
 gi|256597043|gb|EEU16219.1| tyrosyl-tRNA synthetase [Enterococcus faecalis ATCC 4200]
 gi|256682657|gb|EEU22352.1| tyrosyl-tRNA synthetase [Enterococcus faecalis T3]
 gi|256710066|gb|EEU25110.1| tyrosyl-t-RNA synthetase [Enterococcus faecalis T8]
 gi|256947998|gb|EEU64630.1| tyrosyl-tRNA synthetase [Enterococcus faecalis DS5]
 gi|256950263|gb|EEU66895.1| tyrosyl-tRNA synthetase [Enterococcus faecalis Merz96]
 gi|256955077|gb|EEU71709.1| tyrosyl-tRNA synthetase [Enterococcus faecalis HIP11704]
 gi|256985539|gb|EEU72841.1| tyrosyl-tRNA synthetase [Enterococcus faecalis JH1]
 gi|256988906|gb|EEU76208.1| tyrosyl-tRNA synthetase [Enterococcus faecalis E1Sol]
 gi|256991596|gb|EEU78898.1| tyrosyl-tRNA synthetase [Enterococcus faecalis Fly1]
 gi|256994020|gb|EEU81322.1| tyrosyl-tRNA synthetase [Enterococcus faecalis D6]
 gi|256997875|gb|EEU84395.1| tyrosyl-tRNA synthetase [Enterococcus faecalis CH188]
 gi|257157033|gb|EEU86993.1| tyrosyl-tRNA synthetase [Enterococcus faecalis ARO1/DG]
 gi|257160079|gb|EEU90039.1| tyrosyl-tRNA synthetase [Enterococcus faecalis T11]
 gi|257162719|gb|EEU92679.1| tyrosyl-tRNA synthetase [Enterococcus faecalis X98]
 gi|294452324|gb|EFG20765.1| tyrosine--tRNA ligase [Enterococcus faecalis PC1.1]
 gi|295114139|emb|CBL32776.1| tyrosyl-tRNA synthetase [Enterococcus sp. 7L76]
 gi|300848456|gb|EFK76213.1| tyrosine--tRNA ligase [Enterococcus faecalis TUSoD Ef11]
 gi|323479814|gb|ADX79253.1| tyrosyl-tRNA synthetase [Enterococcus faecalis 62]
          Length = 418

 Score =  465 bits (1197), Expect = e-129,   Method: Composition-based stats.
 Identities = 147/424 (34%), Positives = 219/424 (51%), Gaps = 23/424 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L+ R  I+Q +N   L  L     ++ Y G D T  S+H GHL   M++   Q  
Sbjct: 2   NIIDELAWRDAINQQTNEEGLRELTENTSISLYCGVDPTGDSMHIGHLIPFMMMKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P  L+GGGT  IGDPS R   R +   + +Q N++ +        K      +  M+
Sbjct: 62  GHHPYILIGGGTGTIGDPSGRTTERVLQTMEAVQHNVDSLSNQMK---KLFGKDAEVTMV 118

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  +  +D LR+ G  F+VN ML+ + V SRL+    +SF EF Y ILQ+ DF  
Sbjct: 119 NNYDWLSELSLLDFLRDYGKNFNVNTMLAKDIVASRLES--GISFTEFTYQILQSIDFYT 176

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSGA 244
           L K ++ +LQ+GG+DQWGNI  G+DL  + + P  K+F LT PL+  A GTK GKT  GA
Sbjct: 177 LHKKHNIQLQIGGADQWGNITAGLDLIRKKEGPEAKVFGLTIPLMLKADGTKFGKTAGGA 236

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKII 302
           IWL+ + TSP+ F+Q+W N DD DV+ + K  T L   EID +A+   KE    EA++ +
Sbjct: 237 IWLDPKKTSPFEFYQFWLNQDDRDVIKYLKFFTFLDKEEIDALAEKVEKEPGKREAQRRL 296

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGL 352
           A E+T  VH     E+A   +   F  +I            +H+PT+ I+KD       +
Sbjct: 297 AEEVTRFVHDDAALEEAQKISEALFSGNIKDLTIEEIEQGLEHVPTVEITKD----AKNI 352

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           +  +V      S  +AR  +   AI IN   +++    +          + +  GKKN+ 
Sbjct: 353 VDWLVDTEIEPSKRQAREDVSGGAISINGDRVTDLDFAVDPTQHFDGKFVVVRKGKKNYF 412

Query: 413 ICHL 416
           +  +
Sbjct: 413 LAKV 416


>gi|329121680|ref|ZP_08250297.1| tyrosine--tRNA ligase [Dialister micraerophilus DSM 19965]
 gi|327468150|gb|EGF13636.1| tyrosine--tRNA ligase [Dialister micraerophilus DSM 19965]
          Length = 418

 Score =  465 bits (1197), Expect = e-129,   Method: Composition-based stats.
 Identities = 141/420 (33%), Positives = 214/420 (50%), Gaps = 15/420 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L+ RG I+Q ++   L  L  +  ++ Y G D T  S+H GHL   M+L   Q  
Sbjct: 2   NIIDELTWRGAINQQTDAEGLYKLTGEKAISLYCGVDPTGDSMHIGHLIPFMMLKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P  L+GG T  IGDPS R   R +   ++++ N++ +    +   K   G  +   +
Sbjct: 62  GHHPYMLIGGATGSIGDPSGRKTERVLQSMEKVEHNVKCLTAQLT---KLFGGSENITFV 118

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  I  +DLLR+ G  F++N ML+ + V SRL  +  +SF EF Y ILQ+ DF  
Sbjct: 119 NNYEWLSKISLLDLLRDYGKHFNINTMLAKDIVASRL--DTGISFTEFTYQILQSIDFRH 176

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLK--TPKLFALTSPLLTTASGTKMGKTLSGA 244
           L    D +LQ+GG+DQWGNI  G+D     +    +++ LT PL+  A GTK GKT  GA
Sbjct: 177 LYLTRDVQLQIGGADQWGNITSGVDFIHTKEGRQAQVYGLTIPLMLKADGTKFGKTAGGA 236

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKII 302
           +WL+ + TS Y F+Q+W N DD DVV + K  T L   EID + KL     E   A+K +
Sbjct: 237 VWLDSKKTSTYEFYQFWFNQDDRDVVRYLKFFTFLTKEEIDELDKLTQSQPEKRTAQKRL 296

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG------MGLLTLI 356
           A E+T  VHG +  ++A       F  +I    +  I  +      G      M ++  +
Sbjct: 297 AEEVTRFVHGEDGLKEALKVTEALFTGNIQELTLSEIEGAFKNTEGGNVHEAPMNIVEAL 356

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V+ G   S  +AR  +++ AI IN   +++ +  +          I +  GKK +    +
Sbjct: 357 VQGGVEKSKRQAREDIENGAISINGVKVTDLEANVTAHPNTEGKYIIVRKGKKKYFSIKI 416


>gi|259501971|ref|ZP_05744873.1| tyrosine-tRNA ligase [Lactobacillus antri DSM 16041]
 gi|259170030|gb|EEW54525.1| tyrosine-tRNA ligase [Lactobacillus antri DSM 16041]
          Length = 416

 Score =  465 bits (1196), Expect = e-129,   Method: Composition-based stats.
 Identities = 146/420 (34%), Positives = 217/420 (51%), Gaps = 16/420 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG I+Q ++   L  L     +  Y G D T  SLH GHL   M+L   Q  
Sbjct: 2   NIIDDLQWRGAINQTTDLDALKELTENKKIALYCGTDPTGDSLHIGHLIPFMILKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P+ ++GGGT  IGDPS R   R +    ++  N   +            G  +  ++
Sbjct: 62  GHHPVIIIGGGTGAIGDPSGRKSERTLQTMDQVHHNEAALTAQMKKLF----GTENFTIV 117

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  I  +D LR+ G  F++N ML+ E V SRL     +SF EF Y ILQ+ DF+ 
Sbjct: 118 NNYDWLSQISLLDFLRDYGKLFNINTMLNKEVVASRLDA--GISFTEFTYQILQSVDFLH 175

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKLFALTSPLLTTASGTKMGKTLSGA 244
           L ++ D +LQ+GGSDQWGNI  GIDL  +++    K++ LT PL+  A GTK GKT  GA
Sbjct: 176 LYRHNDVQLQIGGSDQWGNITAGIDLIHKVEGSETKVYGLTIPLMLKADGTKFGKTAGGA 235

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKII 302
           IWL+ E TSPY F+Q+W N DD DVV + K  T L   EID +A+   KE    EA++ +
Sbjct: 236 IWLDPEKTSPYEFYQFWINQDDRDVVKYLKYFTFLSKEEIDDLAEKVEKEPWKREAQRRL 295

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRGMGLLTLI 356
           A E+T  VHG +  E+A   +   F   +    +  I        S D  ++   ++  +
Sbjct: 296 AEEVTKFVHGEQAVEEAQRISKALFSGDVADLSVAEIEQGFKNMPSVDVDNQKENIVVWL 355

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
              G   S  +AR+ + + AI+IN   +++   ++          + +  GKK++ +  +
Sbjct: 356 TDNGMEPSRRQARQDVSNGAIRINGEKVTDVDAEVDPSTHFDGKFVIVRRGKKHYFLARV 415


>gi|301166503|emb|CBW26079.1| putative tyrosyl-tRNA synthetase [Bacteriovorax marinus SJ]
          Length = 423

 Score =  465 bits (1196), Expect = e-129,   Method: Composition-based stats.
 Identities = 144/421 (34%), Positives = 227/421 (53%), Gaps = 13/421 (3%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           F   L  RG I  +SN  EL+   ++G ++ Y GYD TA SL  G+L  ++     QK G
Sbjct: 3   FFDELKARGIIDALSNEEELEKKFNEGGMSFYCGYDPTARSLQLGNLFTIITCMRFQKAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKP  L+GG T +IGDPS + E R ++  + ++ENI+ I+     F+ +  G   A+++N
Sbjct: 63  HKPYMLVGGATGMIGDPSGKSEERNLLDMETLKENIDAIRKQLGLFVDFECGDNAAVLVN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W   + +++ LR IG  F VN ML+ +SV+SR++ +  +S  EF+Y +LQAYDFV L
Sbjct: 123 NADWWQGLGFLEFLRTIGKRFRVNEMLNKDSVKSRIESDSGISLTEFSYQVLQAYDFVTL 182

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            K ++  LQ+GGSDQWGN+  G DL  ++   +++ +T PL+T  +G K GK+   A++L
Sbjct: 183 NKLHNVSLQIGGSDQWGNMTAGTDLTRKMNQNQVYCMTMPLVTDQNGKKFGKSAGNAVFL 242

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKIIATE 305
           +  MTSPY  +Q+  N DDA + +  K  T L + EI            +  A+K +A E
Sbjct: 243 DGSMTSPYKMYQFLLNQDDAIIDALLKYYTFLSLDEIAELDSKTKNEPHLRLAQKSLAQE 302

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTL 355
           +T +VHG+E  + A  A    F   I +          +  P++ +S + ++ G G++ +
Sbjct: 303 VTKLVHGQEGLDAALRATQFFFGEKIENVSDADVASIFEDTPSVELSSEMLNEG-GVIDM 361

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           + +     S  E RR +    I INN  I      +   D  S   + L  GKKN+ +  
Sbjct: 362 LSETPLFKSKKEVRRAIDQKGIYINNVAIEGPTQTLSKADLASETALVLRKGKKNYCVVK 421

Query: 416 L 416
            
Sbjct: 422 F 422


>gi|255535883|ref|YP_003096254.1| Tyrosyl-tRNA synthetase [Flavobacteriaceae bacterium 3519-10]
 gi|255342079|gb|ACU08192.1| Tyrosyl-tRNA synthetase [Flavobacteriaceae bacterium 3519-10]
          Length = 452

 Score =  465 bits (1196), Expect = e-129,   Method: Composition-based stats.
 Identities = 153/430 (35%), Positives = 228/430 (53%), Gaps = 26/430 (6%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           F+  L  RG    +      D   ++   TAYIG+D TA SLH G L Q+ +L   Q+ G
Sbjct: 25  FIEELKWRGLYADMMPGT--DEQLNKETTTAYIGFDPTADSLHIGSLIQIKILAHFQQHG 82

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG-TGKTDALML 126
           HKPI+L+GG T +IGDPS +   R  +  + +   +  +K   S F+K+  T    A ++
Sbjct: 83  HKPIALVGGATGMIGDPSGKSTERNALDEETLNHYVSCLKSQLSKFLKFDGTESNSAELV 142

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE---QSLSFLEFNYMILQAYD 183
           NN  W+    +++ +R+IG   +VN M++ ESV+ R+  E   + +SF EF Y +LQ YD
Sbjct: 143 NNYDWMKEFSFLEFIRDIGKNITVNYMMAKESVKKRITGEGGAEGMSFTEFTYQLLQGYD 202

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ L +  + +LQMGGSDQWGNI  G +L  R    + FALT PL+T + G+K GK+ SG
Sbjct: 203 FLHLYREKNVKLQMGGSDQWGNITTGTELIRRKAQGEAFALTVPLITKSDGSKFGKSESG 262

Query: 244 -AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKK 300
              WL+ + TS Y F+Q+W N  D D   F K  T L   EI+ +        +E   +K
Sbjct: 263 ENYWLDPKKTSAYKFYQFWVNATDEDAERFIKFYTFLSKEEIETLIAEHKTAPHERKLQK 322

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDEV 346
            +A E+T  VH + E EKA  A+   F  S                 + +P   ++KDEV
Sbjct: 323 KLAEEVTVWVHNQAEYEKAVKASEILFGRSTAEDLVNLDEATFLEVFEGVPQKELTKDEV 382

Query: 347 SRGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLS 405
             G  ++ LI +  GF  S  EARR L+SNAI +N   +++   ++  +D      + + 
Sbjct: 383 LAG-NIIDLISEKTGFLKSKGEARRELQSNAISVNKEKVTD-SFEVAAKDLIDGKFLLIQ 440

Query: 406 FGKKNHIICH 415
            GKKN+ I  
Sbjct: 441 KGKKNYFIVK 450


>gi|304436501|ref|ZP_07396475.1| tyrosine--tRNA ligase [Selenomonas sp. oral taxon 149 str. 67H29BP]
 gi|304370547|gb|EFM24198.1| tyrosine--tRNA ligase [Selenomonas sp. oral taxon 149 str. 67H29BP]
          Length = 400

 Score =  465 bits (1196), Expect = e-129,   Method: Composition-based stats.
 Identities = 170/390 (43%), Positives = 251/390 (64%), Gaps = 10/390 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + + IL ERGF+ Q ++   L  L     VT Y G+D TA SLHAGHL  LM +  +Q+ 
Sbjct: 2   NAVDILKERGFLAQCTDEAALRDLLDHEQVTFYTGFDPTADSLHAGHLIALMAMSHMQRA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI L+GGGT  +GDPS R + R++M  + I  N +  +   S FI +  G+  A+M+
Sbjct: 62  GHRPICLVGGGTGTVGDPSGRTDMRKVMTDETIAHNCDCFRAQISHFIDFTDGR--AIMV 119

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           +N  WL  + YIDLLR++G+ F+VNRML+ ES + R   E+ L+FLEFNYMI+QAYDF+E
Sbjct: 120 DNGDWLRKLNYIDLLRDVGAHFTVNRMLAAESYKQR--WEKGLTFLEFNYMIMQAYDFLE 177

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + Y CRL+MGG DQW NII G++L  R K   +F LT+ LLT + G KMGKT  GA+W
Sbjct: 178 LNRRYGCRLEMGGDDQWSNIIAGVELCRRKKNITVFGLTNKLLTKSDGKKMGKTAGGALW 237

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           L+ + TSPY+F+QYWRN+DD DV++    LT LPM E+ R+  ++G+E+N +K+++A E+
Sbjct: 238 LDPKKTSPYDFYQYWRNVDDTDVLTCLSLLTFLPMEEVHRLTSVEGQEMNHSKEVLAYEV 297

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
           T +VHG +EA KA   A   F   + S+ +P + ++  E      L+  + + G  +S  
Sbjct: 298 TKIVHGEQEAHKAQEMARALFGGGV-SEQVPQLHVTCGE-----KLIDALTREGVFSSKG 351

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDF 396
           EARR ++   + +N + +S+E   ++   F
Sbjct: 352 EARRLIQQGGVTLNETRVSDEHYVLQADVF 381


>gi|326771624|ref|ZP_08230909.1| tyrosine--tRNA ligase [Actinomyces viscosus C505]
 gi|326637757|gb|EGE38658.1| tyrosine--tRNA ligase [Actinomyces viscosus C505]
          Length = 420

 Score =  465 bits (1196), Expect = e-129,   Method: Composition-based stats.
 Identities = 143/417 (34%), Positives = 229/417 (54%), Gaps = 11/417 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +D L  L  RG I Q ++   L    S G VT Y G+D TA SLH GHL  + ++  LQ 
Sbjct: 2   TDILDELQWRGLIAQHTDIDALRAALSDGAVTFYCGFDPTAPSLHHGHLVAVKVMRHLQL 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+P++L+GG T +IGDP  + E R +     +      ++    + + + +G   A +
Sbjct: 62  AGHRPLALVGGATGLIGDPRAKGE-RSLNTKDVVAGWAASLQEQLENLLDF-SGDNPAQI 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  W  ++  ID LR++G  F +  MLS + V  RL  E+ +S+ EF+Y +LQA D++
Sbjct: 120 VNNLDWTQAMSAIDFLRDLGKHFRMGTMLSKDIVARRLASEEGISYTEFSYQVLQANDYL 179

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           EL + Y C L++GG+DQWGN++ G+DL  +++   +  +T+PL+T A GTK GK+  GAI
Sbjct: 180 ELYRRYGCTLEVGGNDQWGNLVGGMDLIHKVEGASVHVMTNPLITKADGTKFGKSEGGAI 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIA 303
           WLN EM SPY F+Q+W  +DDADVV F K  T L   EI+R+  +  +     EA++++A
Sbjct: 240 WLNPEMLSPYAFYQFWLQVDDADVVRFLKVFTFLEREEIERLEAVTAENPKAREAQRVLA 299

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQ-HMPTISISKDEVSRG------MGLLTLI 356
            E+ T VHG +   +A  A    +     +     TI  +  +++ G        ++ L+
Sbjct: 300 HEVCTWVHGADATAQAEAATSALWGRGDLADIDEATILAATADLASGDVTVGQTTIVDLL 359

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
           V  G     N AR+ +      INN  +++E   I  +   + G + +  G++N  +
Sbjct: 360 VGTGLERGRNAARKTIAGGGAYINNVKVADETAVIGPEHLLAGGVVLVRKGRRNLAV 416


>gi|297832898|ref|XP_002884331.1| tRNA synthetase class I family protein [Arabidopsis lyrata subsp.
           lyrata]
 gi|297330171|gb|EFH60590.1| tRNA synthetase class I family protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 511

 Score =  465 bits (1196), Expect = e-129,   Method: Composition-based stats.
 Identities = 150/432 (34%), Positives = 229/432 (53%), Gaps = 21/432 (4%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQG---VVTAYIGYDLTASSLHAGHLTQLMLLF 61
           + + + IL ERG +  I++   L   CS      +  Y G+D TA SLH G+L  +++L 
Sbjct: 82  RPNVVDILEERGLLESITSEN-LRSACSDPKVAPLRVYCGFDPTAESLHLGNLLGIIVLS 140

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKT 121
           W Q+ GH+ + L+GG T  +GDPS +   R  + +  +++NI  IK I    +       
Sbjct: 141 WFQRCGHQAVGLIGGATGRVGDPSGKSLERPELDADTLEKNIAGIKRIIIKILGGNPSSG 200

Query: 122 DAL-MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
            +  + NN  W   +  +D L ++G F  V  M++ ESV+ RL+ EQ +S+ EF Y +LQ
Sbjct: 201 GSYVIFNNYDWWKDMTMLDFLNKVGRFARVGTMMAKESVKKRLESEQGMSYTEFTYQLLQ 260

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK--LFALTSPLLTTASGTKMG 238
           AYDF+ L KN    +Q+GGSDQWGNI  G DL  ++   +   + LT PLL    GTK G
Sbjct: 261 AYDFLHLFKNEGINVQIGGSDQWGNITAGTDLIRKILQAEEAAYGLTFPLLLKNDGTKFG 320

Query: 239 KTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEI 295
           K+  GAIWL+  M SPY F+QY+ ++ D DV+ F K LT L + EI   +      G   
Sbjct: 321 KSEDGAIWLSPSMLSPYKFYQYFFSVPDVDVIRFLKTLTFLSLDEIKILEDQMSKPGYVP 380

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSI----------HSQHMPTISISKDE 345
           N A+  +A E+T  VHG E  ++A  A       +            ++ +P+ S+  D 
Sbjct: 381 NTAQIKLAEEVTRFVHGEEGLKEAIKATEALRPGAETKLDWNLIERIAEDIPSCSLPIDR 440

Query: 346 VSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLS 405
           VS G+ ++ L V AG   S + ARR LK     +NN  + +E  +++ +D      + LS
Sbjct: 441 VS-GLSIVDLSVSAGLFESKSAARRMLKQGGFYMNNERVDDENKRVEEEDIVEGKGLVLS 499

Query: 406 FGKKNHIICHLC 417
            GKKN ++  + 
Sbjct: 500 AGKKNKVVVRIS 511


>gi|282880553|ref|ZP_06289260.1| tyrosine--tRNA ligase [Prevotella timonensis CRIS 5C-B1]
 gi|281305656|gb|EFA97709.1| tyrosine--tRNA ligase [Prevotella timonensis CRIS 5C-B1]
          Length = 433

 Score =  465 bits (1196), Expect = e-129,   Method: Composition-based stats.
 Identities = 142/434 (32%), Positives = 225/434 (51%), Gaps = 27/434 (6%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
            +F+  L  RG + Q+    E   L  + +V+AY+G D TA SLH GHL  +M+L  LQ+
Sbjct: 3   KNFVEELKWRGMLAQMMPGTE--ELLEKQMVSAYLGTDPTADSLHIGHLCGIMMLRHLQR 60

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY-GTGKTDAL 124
            GHKP  L+GG T +IGDPS +   R ++ S+ +  N E IK   S F+ + G     A 
Sbjct: 61  CGHKPYLLLGGATGMIGDPSGKSLERNLLDSETLYHNQEAIKKQVSKFLDFEGNEPNKAE 120

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL--KREQSLSFLEFNYMILQAY 182
           ++NN  W+   K++D  RE+G   +VN M++ +SV+ RL  +    LSF EF Y +LQ Y
Sbjct: 121 LVNNYDWMKDFKFLDFAREVGKHITVNYMMAKDSVKKRLNGEANDGLSFTEFTYQLLQGY 180

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKLFALTSPLLTTASGTKMGKT 240
           DF+ L + +  +LQ+GG+DQWGN+  G +L  R      + F LT PL+T A G K GKT
Sbjct: 181 DFLYLYQKHGIKLQLGGNDQWGNMTTGTELIRRTLGSDEEAFCLTCPLITKADGKKFGKT 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEA 298
            +G IWL++  T+PY F+Q+W N+ D D   + K  T+L    I+ +     ++      
Sbjct: 241 ENGNIWLDRNRTTPYAFYQFWLNVSDEDAEKYIKIFTSLERETIESLITEHQQDPGRRTL 300

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQ--------------HMPTISISKD 344
           +K +A E+T MVH +E+ + A  A+   F  +                   +P  ++SKD
Sbjct: 301 QKRLAQEVTVMVHSQEDLDMAIEASQILFGKATKESLQKLDEATFLDVFNGVPHYTVSKD 360

Query: 345 EVSRGMGLLTLIVKAG--FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNI 402
            +  G   +    + G     S  E R+ +K   + +N   ++     +  +D      +
Sbjct: 361 LL--GSTAVDFFTQEGMEIFPSKGELRKLVKGGGVSLNKEKLTAFDQVVTAEDLIDGKYL 418

Query: 403 KLSFGKKNHIICHL 416
            +  GKKN+ +  +
Sbjct: 419 LVQRGKKNYFLITV 432


>gi|312869623|ref|ZP_07729773.1| tyrosine--tRNA ligase [Lactobacillus oris PB013-T2-3]
 gi|311094857|gb|EFQ53151.1| tyrosine--tRNA ligase [Lactobacillus oris PB013-T2-3]
          Length = 416

 Score =  464 bits (1195), Expect = e-128,   Method: Composition-based stats.
 Identities = 146/424 (34%), Positives = 222/424 (52%), Gaps = 24/424 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG I+Q ++   L  L     +  Y G D T  SLH GHL   M+L   Q  
Sbjct: 2   NIIDDLQWRGAINQTTDLDALKELTENDKIALYCGTDPTGDSLHIGHLIPFMILKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P+ ++GGGT  IGDPS R   R +    ++  N E +            G  +  ++
Sbjct: 62  GHHPVIIIGGGTGAIGDPSGRKSERTLQTMDQVHHNEEALTAQMKKLF----GTENFTIV 117

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  I  +D LR+ G  F++N ML+ E V SRL     +SF EF Y ILQ+ DF+ 
Sbjct: 118 NNYDWLSRISLLDFLRDYGKLFNINTMLNKEVVASRLDA--GISFTEFTYQILQSVDFLH 175

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSGA 244
           L ++ D +LQ+GGSDQWGNI  GIDL  +++ P  K++ LT PL+  A GTK GKT  GA
Sbjct: 176 LYRHNDVQLQIGGSDQWGNITAGIDLIHKVEGPDAKVYGLTIPLMLKADGTKFGKTAGGA 235

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKII 302
           IWL+ E TSPY F+Q+W N DD DV+ + K  T L   EID +A+   KE    EA++ +
Sbjct: 236 IWLDPEKTSPYEFYQFWINQDDRDVIKYLKYFTFLSKEEIDDLAEKVEKEPWKREAQRRL 295

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGL 352
           A E+T  VHG +  E+A   +   F   +            ++MP++ +      +   +
Sbjct: 296 AEEVTKFVHGEKAVEEAQRISKALFSGDVADLSAAEIEQGFKNMPSVDVD----DKKENI 351

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           +  +   G   S  +AR+ + + AI+IN   +++ + ++          + +  GKK++ 
Sbjct: 352 VVWLTDNGMEPSRRQARQDVSNGAIRINGEKVTDVEAEVDPSTHFDGKFVIVRRGKKHYF 411

Query: 413 ICHL 416
           +  +
Sbjct: 412 LARV 415


>gi|46446803|ref|YP_008168.1| tyrosine-tRNA ligase [Candidatus Protochlamydia amoebophila UWE25]
 gi|81626958|sp|Q6MC06|SYY_PARUW RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|46400444|emb|CAF23893.1| probable tyrosine-tRNA ligase [Candidatus Protochlamydia
           amoebophila UWE25]
          Length = 425

 Score =  464 bits (1195), Expect = e-128,   Method: Composition-based stats.
 Identities = 150/424 (35%), Positives = 239/424 (56%), Gaps = 16/424 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           ++ + +L ERGFI  +++   +  L +Q  +  Y G+D TA SLH G+L  +M L W Q+
Sbjct: 2   TNVMDVLRERGFIDAVTSEE-IRQLTNQ-PIKVYCGFDPTADSLHLGNLVAIMGLAWFQR 59

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH P++++GG T +IGDPS ++  R+++  ++IQ N++ I     + + +      A++
Sbjct: 60  FGHTPVAIVGGATGMIGDPSGKNAERQLLDEKKIQLNLKGISKNLEAILDFNHPTAPAII 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           LNN  W  +  +I  LR++G  F ++ ML+ +SV++RL  E+ +SF EF Y ILQ YDF+
Sbjct: 120 LNNLDWFKNFTFISFLRDVGKLFRLSPMLAKDSVKTRLNSEEGMSFTEFCYQILQGYDFL 179

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L +NY   +++GGSDQWGNI  G DL  ++     + +T PLLT + G K GK+  GA+
Sbjct: 180 HLFENYGVTVELGGSDQWGNITAGTDLIRKVHAKPAYGITFPLLTKSDGQKFGKSEKGAV 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKII 302
           WL+ +  S Y F+Q+   ++DADV++  + LT L M EI   ++M K        A+K +
Sbjct: 240 WLSPDKLSSYEFYQHLIRVEDADVINLMRMLTFLDMGEIRHYEQMMKEADYVPRTAQKRL 299

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSI----------HSQHMPTISISKDEVSRGMGL 352
           A EIT +VHG E  + A          S            +  MP+  +  + V     L
Sbjct: 300 AEEITRLVHGEEGLKIAIKVTEGVAPGSQTSLNADILEKLAADMPSCEMKLENV-LNKKL 358

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           + L+V+    TS +EARR L++  + INN  I +E   I ++   S+  I L+ GKKN +
Sbjct: 359 IDLLVETKLQTSKSEARRLLRNGGVYINNKKIEDENHIISVECLISSRLILLAAGKKNKM 418

Query: 413 ICHL 416
           I  L
Sbjct: 419 IIRL 422


>gi|328474831|gb|EGF45635.1| tyrosyl-tRNA synthetase [Listeria monocytogenes 220]
          Length = 405

 Score =  464 bits (1195), Expect = e-128,   Method: Composition-based stats.
 Identities = 150/394 (38%), Positives = 209/394 (53%), Gaps = 21/394 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG I+Q ++   L     +  ++ Y G D +  S+H GHL   M+L   Q  
Sbjct: 2   NIIDELEWRGAIYQQTDEEGLRKWVEEKQISLYCGIDPSGDSMHIGHLIPFMILRRFQNA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI L+GG T  IGDPS + E R++   ++I +N+E ++        +  G + A M+
Sbjct: 62  GHRPIILVGGATGTIGDPSGKKEERKLQSMEQISKNVESLRVQLGKIFDF-EGNSAASMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   +  +D LR+ G  F+VN MLS + V SRL  E  +SF EF Y ILQA DF  
Sbjct: 121 NNYDWTKDVSILDFLRDYGKEFNVNTMLSKDIVASRL--EVGISFTEFAYQILQAMDFNH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSGA 244
           L +  DCRLQ+GGSDQWGNI  G+DL  + +    K F LT PLLT A GTK GK+  GA
Sbjct: 179 LYEFNDCRLQIGGSDQWGNITAGLDLIRKKQGENAKAFGLTIPLLTKADGTKFGKSEGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKII 302
           IWLN E T+PY F+Q+W N DD DVV + K  T L  +EID +AK       +  A+K +
Sbjct: 239 IWLNPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLTEAEIDELAKQVETEPHLRAAQKTL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGL 352
           A E+T  VH  E  E+A   +   F   + +          + +PT      E      L
Sbjct: 299 AAEMTKFVHSEEALEQALKISKALFSGDVKALTADEIEQGFKDVPTFVAEDTE----ANL 354

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISN 386
           +  +V  G   S  +AR  + + AI IN     +
Sbjct: 355 VDWLVTLGIEPSKRQAREDVANGAIYINGERQQD 388


>gi|288928869|ref|ZP_06422715.1| tyrosine--tRNA ligase [Prevotella sp. oral taxon 317 str. F0108]
 gi|288329853|gb|EFC68438.1| tyrosine--tRNA ligase [Prevotella sp. oral taxon 317 str. F0108]
          Length = 433

 Score =  464 bits (1195), Expect = e-128,   Method: Composition-based stats.
 Identities = 145/434 (33%), Positives = 220/434 (50%), Gaps = 27/434 (6%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
            K +F+  L  RG + QI    E   L  +  VTAY+G D TA SLH GHL  +M+L  L
Sbjct: 1   MKKNFVEELRWRGMLAQIMPGTE--ELLQKETVTAYLGTDPTADSLHIGHLAGIMMLRHL 58

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG-TGKTD 122
           Q  GHKPI L+GG T +IGDPS +   R ++ S+ +  N E IK   + F+ +   G   
Sbjct: 59  QMCGHKPIILVGGATGMIGDPSGKSAERNLLDSKTLYHNQECIKAQVAKFLDFDAKGDNA 118

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQ 180
           A M+NN  W+    ++D  R +G   +VN M++ +SV+ RL  +    LSF EF Y +LQ
Sbjct: 119 AEMVNNYDWMKDFSFLDFARTVGKHITVNYMMAKDSVKKRLNGDARDGLSFTEFTYQLLQ 178

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKLFALTSPLLTTASGTKMG 238
            YDF+ L +   C+LQ+GG+DQWGN+  G +L  R      + +ALT PL+T A GTK G
Sbjct: 179 GYDFLHLYETKGCKLQLGGNDQWGNMTTGAELIRRTLGIENEAYALTCPLITKADGTKFG 238

Query: 239 KTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--N 296
           KT  G IWL+ + TSPY F+Q+W N+ DAD   + K  T+L    ID +   Q ++    
Sbjct: 239 KTEGGNIWLDAKRTSPYMFYQFWLNVSDADAERYIKIFTSLDKETIDALVAEQNEDPGRR 298

Query: 297 EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISIS 342
             ++ +A E+T MVH +   ++A  A+   F  +                 + +P   + 
Sbjct: 299 PLQRRLAEEVTVMVHSQAALDQAMEASNILFGKATKENLLKLDEQTLLDVFEGVPHYELD 358

Query: 343 KDEVSRGMGLLTLIV--KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG 400
           K  +  G   + L          S  E R+ ++   + +N   ++     +   D     
Sbjct: 359 KALL--GQPAIDLFTREDVPVFASKGEMRKLVQGGGVSLNKEKLAAADRPVTADDLIDGK 416

Query: 401 NIKLSFGKKNHIIC 414
            + +  GKKN+ + 
Sbjct: 417 YLLVQRGKKNYYLL 430


>gi|320531707|ref|ZP_08032646.1| tyrosyl-tRNA synthetase [Actinomyces sp. oral taxon 171 str. F0337]
 gi|320136087|gb|EFW28096.1| tyrosyl-tRNA synthetase [Actinomyces sp. oral taxon 171 str. F0337]
          Length = 420

 Score =  464 bits (1194), Expect = e-128,   Method: Composition-based stats.
 Identities = 142/418 (33%), Positives = 227/418 (54%), Gaps = 13/418 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +D L  L  RG I Q ++   L    + G VT Y G+D TA SLH GHL  + ++  LQ 
Sbjct: 2   TDILDELQWRGLIAQHTDIDALRAALTDGAVTFYCGFDPTAPSLHHGHLVAVKVMRHLQL 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH P++L+GG T +IGDP  + E R +     +      ++    + + + +G   A +
Sbjct: 62  AGHHPLALVGGATGLIGDPRAKGE-RTLNTKDVVAGWAAGLQEQLENLLDF-SGDNPARI 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  W  ++  ID LR++G  F +  MLS + V  RL  E+ +S+ EF+Y +LQA D++
Sbjct: 120 VNNLDWTQAMSAIDFLRDLGKHFRMGTMLSKDIVARRLASEEGISYTEFSYQVLQANDYL 179

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           EL + Y C L++GG+DQWGN++ G+DL  +++   +  +T+PL+T A GTK GK+  GAI
Sbjct: 180 ELYRRYGCTLEVGGNDQWGNLVGGMDLIHKVEGDSVHVMTNPLITKADGTKFGKSEGGAI 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIA 303
           WLN EM SPY F+Q+W  +DDADVV F K  T L   EI+R+     +     EA++++A
Sbjct: 240 WLNPEMLSPYAFYQFWLQVDDADVVRFLKVFTFLEREEIERLEAATAENPKAREAQRVLA 299

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISI--------SKDEVSRGMGLLTL 355
            E+ T VHG +   +A  A    +     +  +   +I        S D    G  ++ L
Sbjct: 300 HEVCTWVHGADATAQAEAATSALWGRGDLT-DIDEATILTATSDLASSDVTVGGTTIVDL 358

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
           +V  G     N AR+ +      +NN  +++E + I  +   + G + +  G++N  +
Sbjct: 359 LVGTGLERGRNAARKTIAGGGAYLNNVKVADETVVIGPEHLLAGGVVLVRKGRRNLAV 416


>gi|68171326|ref|ZP_00544724.1| Tyrosyl-tRNA synthetase, class Ib [Ehrlichia chaffeensis str.
           Sapulpa]
 gi|88658503|ref|YP_506920.1| tyrosyl-tRNA synthetase [Ehrlichia chaffeensis str. Arkansas]
 gi|123493977|sp|Q2GI13|SYY_EHRCR RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|67999253|gb|EAM85905.1| Tyrosyl-tRNA synthetase, class Ib [Ehrlichia chaffeensis str.
           Sapulpa]
 gi|88599960|gb|ABD45429.1| tyrosyl-tRNA synthetase [Ehrlichia chaffeensis str. Arkansas]
          Length = 418

 Score =  464 bits (1194), Expect = e-128,   Method: Composition-based stats.
 Identities = 201/413 (48%), Positives = 276/413 (66%), Gaps = 1/413 (0%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
            +S FLS L  RG+  Q +N   LD L SQ  V AYIG+D TA SLH G L Q+M+L  L
Sbjct: 3   LESQFLSFLYSRGYCSQCTNISMLDQLMSQQCVHAYIGFDCTAKSLHVGSLIQVMILRHL 62

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           QK GHKPI L+G GT+ IGDPS +D+SR M+ + EI+EN   I  +   FI +G G  DA
Sbjct: 63  QKFGHKPIILLGDGTTKIGDPSGKDKSRAMLSASEIEENALGIYEVLKKFIVFGDGPHDA 122

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           L++ N  WL  + YI+ LR+IG  FSVN ML+F+SVR RL+REQ+LSFLEFNYM+LQ+YD
Sbjct: 123 LLVRNAEWLNGLNYIEFLRDIGKHFSVNNMLTFDSVRLRLEREQNLSFLEFNYMLLQSYD 182

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           FVEL + Y+C LQ+GGSDQWGNI+ G++LG +L+ P+LF LT+ LL T+SG KMGKT  G
Sbjct: 183 FVELNRRYNCLLQIGGSDQWGNIVSGVELGRKLRLPELFGLTTNLLLTSSGEKMGKTAQG 242

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIA 303
           A+WL+  M SP ++WQY+RN+ D DV  F +  T L ++EI  +  LQG EINE+KKI+A
Sbjct: 243 AVWLDGNMYSPVDYWQYFRNVKDEDVGRFLRLFTELSLNEIRNLELLQGHEINESKKILA 302

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
           TE T + HG E A+  A  A++ F+ +  S  +    + K +V  G+ ++ L+       
Sbjct: 303 TEATRICHGEEIAQSVANDALKVFECNDDS-GLSVFYVKKYDVELGLPIIKLLQMCEMEK 361

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           S++ ARR +     KIN+ ++ +   ++ L+DF +T  +KLS GKK H+   L
Sbjct: 362 SSSSARRLINDKGCKINDVVVLDMNYKLSLKDFYNTSYVKLSCGKKRHLKVML 414


>gi|313892288|ref|ZP_07825881.1| tyrosine--tRNA ligase [Dialister microaerophilus UPII 345-E]
 gi|313119426|gb|EFR42625.1| tyrosine--tRNA ligase [Dialister microaerophilus UPII 345-E]
          Length = 418

 Score =  464 bits (1194), Expect = e-128,   Method: Composition-based stats.
 Identities = 141/420 (33%), Positives = 213/420 (50%), Gaps = 15/420 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L+ RG I+Q ++   L  L  +  ++ Y G D T  S+H GHL   M+L   Q  
Sbjct: 2   NIIDELTWRGAINQQTDAEGLYKLTGEKAISLYCGVDPTGDSMHIGHLIPFMMLKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P  L+GG T  IGDPS R   R +   ++++ N++ +    +   K   G  +   +
Sbjct: 62  GHHPYMLIGGATGSIGDPSGRKTERVLQSMEKVEHNVKCLTAQLT---KLFGGSENITFV 118

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  I  +DLLR+ G  F++N ML+ + V SRL  +  +SF EF Y ILQ+ DF  
Sbjct: 119 NNYEWLSKISLLDLLRDYGKHFNINTMLAKDIVASRL--DTGISFTEFTYQILQSIDFRH 176

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKLFALTSPLLTTASGTKMGKTLSGA 244
           L    D +LQ+GG+DQWGNI  G+D     +     ++ LT PL+  A GTK GKT  GA
Sbjct: 177 LYLTRDVQLQIGGADQWGNITSGVDFIHTKEGRDAPVYGLTIPLMLKADGTKFGKTAGGA 236

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKII 302
           +WL+ + TS Y F+Q+W N DD DVV + K  T L   EID + KL     E   A+K +
Sbjct: 237 VWLDSKKTSTYEFYQFWFNQDDRDVVRYLKFFTFLTKEEIDELDKLTQSQPEKRTAQKRL 296

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG------MGLLTLI 356
           A E+T  VHG +  ++A       F  +I    +  I  +      G      M ++  +
Sbjct: 297 AEEVTRFVHGEDGLKEALKVTEALFTGNIQELTLSEIEGAFKNTEGGNVHEAPMNIVEAL 356

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V+ G   S  +AR  +++ AI IN   +++ +  +          I +  GKK +    +
Sbjct: 357 VQGGVEQSKRQAREDIENGAISINGVKVTDLEANVTAHPNTEGKYIIVRKGKKKYFSIKI 416


>gi|288800271|ref|ZP_06405729.1| tyrosine--tRNA ligase [Prevotella sp. oral taxon 299 str. F0039]
 gi|288332484|gb|EFC70964.1| tyrosine--tRNA ligase [Prevotella sp. oral taxon 299 str. F0039]
          Length = 433

 Score =  463 bits (1193), Expect = e-128,   Method: Composition-based stats.
 Identities = 142/434 (32%), Positives = 225/434 (51%), Gaps = 27/434 (6%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
            +F+  L  RG + Q+    E      +  V+AY+G D TA SLH GHL  +M+L  LQ+
Sbjct: 3   KNFVEELKWRGMLAQMMPGTE--EFLMKEKVSAYLGTDPTADSLHIGHLAGIMMLRHLQR 60

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG-TGKTDAL 124
            GHKP  L+GG T +IGDPS + + R ++ ++ +  N E IK   + F+ +  +  T A+
Sbjct: 61  CGHKPYILVGGATGMIGDPSGKSQERNLLDAETLYHNQECIKKQVAKFLDFNASEDTAAV 120

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQAY 182
           M+NN  W+    ++D  R +G   +VN M++ +SV+ RL  E    LSF EF Y +LQ Y
Sbjct: 121 MVNNYDWMKDFTFLDFARLVGKHITVNYMMAKDSVKKRLNGEARDGLSFTEFTYQLLQGY 180

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL--KTPKLFALTSPLLTTASGTKMGKT 240
           DF+ L +  + +LQ+GG+DQWGN+  G +L  R      + FALT PL+T A GTK GKT
Sbjct: 181 DFLHLYRTNNVKLQLGGNDQWGNMTTGTELIRRTLGNDAEAFALTCPLITKADGTKFGKT 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEA 298
            SG IWL++  T+PY F+Q+W N+ D D V + K  T+L    I+ +     ++      
Sbjct: 241 ESGNIWLDRNRTTPYKFYQFWLNVSDDDAVKYIKIFTSLEKDVINALIAEHEQDPGMRVL 300

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKD 344
           +K +A E+T MVH +E+ + A  A+   F                    + +P   +SK+
Sbjct: 301 QKRLADELTVMVHSQEDLDLAKEASGILFGKGTKESLAKFDDATLLSIFEGVPQFKLSKE 360

Query: 345 EVSRGMGLLTLIV--KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNI 402
            +  G   + L    +     S  E R+ ++   + +N   +      I   D  +   +
Sbjct: 361 AL--GQPAVELFTSDEVKVFPSKGEMRKLVQGGGVSLNKEKLQAVDQVITTDDLLNGKYL 418

Query: 403 KLSFGKKNHIICHL 416
            +  GKKN+ +  +
Sbjct: 419 LVQRGKKNYYLITV 432


>gi|315607059|ref|ZP_07882063.1| tyrosine--tRNA ligase [Prevotella buccae ATCC 33574]
 gi|315251113|gb|EFU31098.1| tyrosine--tRNA ligase [Prevotella buccae ATCC 33574]
          Length = 433

 Score =  463 bits (1193), Expect = e-128,   Method: Composition-based stats.
 Identities = 142/432 (32%), Positives = 220/432 (50%), Gaps = 27/432 (6%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
            +F+  L  RG + QI    E     ++ +V+AY+G D TA SLH GHL  +M+L  LQ+
Sbjct: 3   KNFVEELKWRGMLAQIMPGTE--EYLNEHLVSAYLGTDPTADSLHIGHLCGIMMLRHLQR 60

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG-TGKTDAL 124
            GHKP  L+GG T +IGDPS + + R ++ S+ +  N E IK   + F+ +       A 
Sbjct: 61  CGHKPYLLVGGATGMIGDPSGKSQERNLLDSETLYHNQEAIKKQAAKFLDFDSDEPNKAE 120

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQAY 182
           M+NN  W+    ++D  RE+G   +VN M++ +SV+ RL  E    LSF EF Y +LQ Y
Sbjct: 121 MVNNYDWMKDFTFLDFAREVGKHITVNYMMAKDSVKKRLNGEASDGLSFTEFTYQLLQGY 180

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKLFALTSPLLTTASGTKMGKT 240
           DF+   ++Y  RLQ+GG+DQWGN+  G +L  R      + F LT PL+T A G K GKT
Sbjct: 181 DFLYQYQHYGVRLQLGGNDQWGNMTTGTELIRRTLGADAEAFCLTCPLITKADGKKFGKT 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEA 298
            SG +WL++  T+PY F+Q+W N+ D D   + K  T+L    I+ + +   ++      
Sbjct: 241 ESGNVWLDRNRTTPYAFYQFWLNVSDDDAERYIKIFTSLERDVIEALIEEHRQDPGRRVL 300

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQ--------------HMPTISISKD 344
           +K +A E+TTMVH RE+ + A  A+   F  +                   +P   + K 
Sbjct: 301 QKRLAEEVTTMVHSREDLDMAIAASNILFGKATKDSLAQLDEATLNDVFADVPHYDLDKS 360

Query: 345 EVSRGMGLLTLIV--KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNI 402
            +  G   + L          S  E R+ +K   + +N   ++     +   D      +
Sbjct: 361 LL--GQTAVDLFCSEDMDIFPSKGEMRKLVKGGGVSLNKEKLAAFDRPVTADDLIDGKYL 418

Query: 403 KLSFGKKNHIIC 414
            +  GKKN+ + 
Sbjct: 419 LVQRGKKNYYLL 430


>gi|299142114|ref|ZP_07035248.1| tyrosine--tRNA ligase [Prevotella oris C735]
 gi|298576576|gb|EFI48448.1| tyrosine--tRNA ligase [Prevotella oris C735]
          Length = 433

 Score =  463 bits (1193), Expect = e-128,   Method: Composition-based stats.
 Identities = 139/434 (32%), Positives = 223/434 (51%), Gaps = 27/434 (6%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
            +F+  L  RG + QI    E        +V+AY+G D TA SLH GHL  +M+L  LQ+
Sbjct: 3   KNFVEELKWRGMLAQIMPGTE--EYLQSNMVSAYLGTDPTADSLHIGHLCGIMMLRHLQR 60

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG-TGKTDAL 124
            GHKP  L+GG T +IGDPS + + R ++ ++ +  N E IK   + F+ +       A 
Sbjct: 61  CGHKPYLLVGGATGMIGDPSGKSQERNLLDTKTLYHNQEAIKKQVAKFLDFDGNEPNKAE 120

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQAY 182
           ++NN  W+    ++D  RE+G   +VN M++ +SV+ RL  E    LSF EF Y +LQ Y
Sbjct: 121 LVNNYDWMKDFTFLDFAREVGKHITVNYMMAKDSVQKRLNGEARDGLSFTEFTYQLLQGY 180

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKLFALTSPLLTTASGTKMGKT 240
           DF+ L +++  RLQ+GG+DQWGN+  G +L  R      + F LT PL+T A G K GKT
Sbjct: 181 DFLYLYQHHGVRLQLGGNDQWGNMTTGTELIRRTLGNEAEAFCLTCPLITKADGRKFGKT 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEA 298
            SG +WL++  T+PY F+Q+W N+ D+D   + K  T L    ID +     ++      
Sbjct: 241 ESGNVWLDRNRTTPYAFYQFWLNVSDSDAERYIKIFTDLDKETIDALIADHQQDPGRRIL 300

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKD 344
           +K +A E+TTMVH +E+ + A  A+   F  +                 + +P  ++ + 
Sbjct: 301 QKRLAEEVTTMVHSKEDLDMAIAASNILFGKATKDSLAQLDEATLNDVFKDVPHYTVDRS 360

Query: 345 EVSRGMGLLTLIV--KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNI 402
            +  G   + +    +     S +E R+ +K   + +N   +S     +   D      +
Sbjct: 361 LL--GSPAVDVFNQEEMDIFPSKSEMRKLVKGGGVSLNKEKLSAFDQLVTTDDLIDGKYL 418

Query: 403 KLSFGKKNHIICHL 416
            +  GKKN+ +  +
Sbjct: 419 LVQRGKKNYYLITV 432


>gi|329940721|ref|ZP_08290001.1| tyrosyl-tRNA synthetase [Streptomyces griseoaurantiacus M045]
 gi|329300015|gb|EGG43913.1| tyrosyl-tRNA synthetase [Streptomyces griseoaurantiacus M045]
          Length = 423

 Score =  463 bits (1193), Expect = e-128,   Method: Composition-based stats.
 Identities = 143/422 (33%), Positives = 226/422 (53%), Gaps = 11/422 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +D +  L  RG   Q ++   L    + G VT Y G+D TA SLH GHL Q++ +  LQ+
Sbjct: 2   TDIVDELKWRGLFAQSTDEDALRKALADGPVTFYCGFDPTAPSLHVGHLVQVLTVRRLQQ 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+P++L+GG T  IGDP      R +   + +   +E+++G    F+ +  G+  A+M
Sbjct: 62  AGHRPLALVGGATGQIGDPRP-TAERTLNSPETVAGWVERLRGQIEPFLSF-EGENAAVM 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  W   +  I+ LR+IG  F VN+ML+ +SV  RL+  + +S+ EF+Y +LQA DF+
Sbjct: 120 VNNLDWTAGLSAIEFLRDIGKHFRVNKMLTKDSVARRLESSEGISYTEFSYQLLQAMDFL 179

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASGTKMGKTLSGA 244
           EL + Y C +Q GGSDQWGN+  G+DL  RL+    + A  +PL+T A GTK GKT  GA
Sbjct: 180 ELYRRYGCTMQQGGSDQWGNLTAGLDLLHRLEPDAAVHAYATPLMTKADGTKFGKTEGGA 239

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKII 302
           +WL+ EMT+PY F+Q+W N+DD D+  + + L+     E++ + +   +      A++ +
Sbjct: 240 VWLDPEMTTPYAFYQFWLNVDDRDISGYLRILSFKSREELEELERQTEERPQARAAQRAL 299

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQ------HMPTISISKDEVSRGMGLLTLI 356
           A E+T +VHG E+A     A+   F     +             +   +V     ++ L 
Sbjct: 300 AEELTALVHGPEQAAAVIAASKALFGQGELTGLDEATLAAALSELPHVKVGELAPVVDLF 359

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            + G A S + ARR +K     +NN  ++ E      +D      + L  GK+N      
Sbjct: 360 AEVGLAPSKSAARRTVKEGGAYVNNVKVAAEDAVPAAEDLLHGRWLVLRRGKRNLAAVEY 419

Query: 417 CG 418
            G
Sbjct: 420 TG 421


>gi|328544990|ref|YP_004305099.1| Tyrosyl-tRNA synthetase, class Ib [polymorphum gilvum SL003B-26A1]
 gi|326414732|gb|ADZ71795.1| Tyrosyl-tRNA synthetase, class Ib [Polymorphum gilvum SL003B-26A1]
          Length = 423

 Score =  463 bits (1193), Expect = e-128,   Method: Composition-based stats.
 Identities = 175/413 (42%), Positives = 262/413 (63%), Gaps = 3/413 (0%)

Query: 2   PAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
              KS+ L +L +RG +HQ ++   LD   + G VTAY G+D TA+SLH GHL  LM L 
Sbjct: 11  SRLKSEALQVLVDRGLVHQCTDLEALDAAFAAGPVTAYAGFDATAASLHVGHLVPLMTLR 70

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKT 121
           WLQK GH+P+ ++GGGTS++GDPSFR+++R ++   ++ ENI  I+      +     + 
Sbjct: 71  WLQKLGHRPLVVLGGGTSLVGDPSFRNDARPLLTEAQVTENIAGIRRSIEGVLDLDDSEG 130

Query: 122 DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA 181
            A +++N  WL   ++++ LR+ G+ F+VNRM++F+SVRSRL  +Q L+ LEF YM+LQA
Sbjct: 131 -ARLVDNAEWLTEFRFLEFLRDYGTQFTVNRMITFDSVRSRLDAQQPLTVLEFCYMMLQA 189

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            DF+EL++ ++CRLQ+GGSDQWGNI+ G++L  +    +LF LT PL+TTA G KMGKT 
Sbjct: 190 VDFLELSRRHECRLQVGGSDQWGNIVNGVELARKTDGRRLFGLTVPLVTTAGGAKMGKTA 249

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKI 301
           +GA+WL+ +  SP+ FWQ+WRN  DADV    +  T LPMSE+ R+A L+G E+NEAKKI
Sbjct: 250 AGAVWLHPDHLSPFAFWQFWRNTADADVGKCLRLFTDLPMSEVGRLAVLEGVELNEAKKI 309

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGF 361
           +AT+ T +VHG   A  A       F     S   PT       ++ G+GLL L+V+ G 
Sbjct: 310 LATQATGVVHGPAAAGAALEQGEALFAGGEASAR-PTHEADCARLAAGLGLLDLLVEVGL 368

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           A S   ARR ++   +++N   +++ +  +   D      + L+ G++   + 
Sbjct: 369 AASNGAARRLIEGGGLRLNGETVADPRRTVTAADLTDGR-LTLAAGRRRKAVV 420


>gi|256420552|ref|YP_003121205.1| tyrosyl-tRNA synthetase [Chitinophaga pinensis DSM 2588]
 gi|256035460|gb|ACU59004.1| tyrosyl-tRNA synthetase [Chitinophaga pinensis DSM 2588]
          Length = 427

 Score =  463 bits (1193), Expect = e-128,   Method: Composition-based stats.
 Identities = 141/425 (33%), Positives = 223/425 (52%), Gaps = 19/425 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG +  I    E  +L  + + +AY+G+D TA SLH G L  ++LL  LQ+ 
Sbjct: 2   NLIEELRWRGMVQDIMPGTEEQLL--KEMTSAYVGFDPTADSLHIGSLVPILLLVHLQRA 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA-LM 125
           GHKP +L+GG T ++GDPSF+ E R+M+    +  N   IK     F+ +   + +A  M
Sbjct: 60  GHKPFALVGGATGMVGDPSFKAEERKMLDLDTLAHNQNGIKAQLEKFLDFDPARPNAAEM 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  W   I ++D +R+ G   +VN M+S +SV+ RL+ +  +SF EF Y ++Q YDF 
Sbjct: 120 VNNFDWFKDISFLDFIRDTGKHITVNYMMSKDSVKRRLEGDSGMSFTEFTYQLIQGYDFY 179

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L    +C+LQMGGSDQWGNI+ G +L  R    + FA T PLL  A G+K GK+  G I
Sbjct: 180 HLYTAKNCKLQMGGSDQWGNIVTGTELIRRKANGEAFAFTCPLLKKADGSKFGKSERGNI 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIA 303
           WL+ + TSPY F+Q+W    D D  ++ K  T L   EI+ +     ++    + +K +A
Sbjct: 240 WLDPQKTSPYLFYQFWVKTADEDAKNYIKIFTFLGQEEINTLIAAHDQDPGKRQLQKKLA 299

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDEVSRG 349
            E+T  VHG+ E E A  A+   F                      +P ++++  ++  G
Sbjct: 300 EELTVFVHGQTELEFALKASDLLFRNDTAEVLQSLTESQLLEIMDGVPQVAVAAADLEAG 359

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
             +L+ + +     S  EAR+ +++N I IN   +S     +      +   I +  GK 
Sbjct: 360 KDILSFLAETNILPSKGEARKMIQNNGISINKVKVSAIDKMVDKSLLLNDKYILVQRGKN 419

Query: 410 NHIIC 414
           N+ + 
Sbjct: 420 NYYLV 424


>gi|119944682|ref|YP_942362.1| tyrosyl-tRNA synthetase [Psychromonas ingrahamii 37]
 gi|119863286|gb|ABM02763.1| tyrosyl-tRNA synthetase [Psychromonas ingrahamii 37]
          Length = 423

 Score =  463 bits (1193), Expect = e-128,   Method: Composition-based stats.
 Identities = 153/412 (37%), Positives = 217/412 (52%), Gaps = 10/412 (2%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L  RG I Q++   EL    S G  T Y G+D TA SLH G L  L+ L   Q  G
Sbjct: 4   LLEDLQARGLIAQMTADEELHEHLSSGCKTLYCGFDPTADSLHIGSLVPLVTLKRFQDAG 63

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKP++L+GG T +IGDPSF+   R++     + +  EKIKG  S+FI++G  +  A ++N
Sbjct: 64  HKPLALVGGATGLIGDPSFKAVERKLNTDDVVADWAEKIKGQVSAFIEFGDRENSAEVVN 123

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDFVE 186
           N  W+  +  I  LR++G  FSVN M+  ESV+ R+ R    +SF EF YM+LQ+YDF  
Sbjct: 124 NLDWIGKMDTISFLRDVGKHFSVNAMIQKESVKQRIDRDGSGMSFTEFTYMLLQSYDFAA 183

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L K   C LQ+GGSDQWGNI  GIDL  R+   K+F LT PL+T + GTK GKT +G IW
Sbjct: 184 LNKANGCSLQIGGSDQWGNITGGIDLTRRMNQEKVFGLTLPLVTKSDGTKFGKTEAGTIW 243

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIAT 304
           L+   TSPY F+Q+W    DADV  F    T L + EI  + +     +   E + I+A 
Sbjct: 244 LDAAKTSPYAFFQFWITTLDADVYKFLHYFTFLSVEEIAAIEENDKTIQGRPEGQNILAQ 303

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQH------MPTISISKDEVSR-GMGLLTLIV 357
           ++T MVHG +    A       F   + +        +    +    V      L+ L+ 
Sbjct: 304 QVTKMVHGEQGLGSAQRITEALFSGDLSALDESDLAQLAQDGLPATFVEGTEKPLVELLT 363

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
               A S   AR  +K+ A+ IN    ++ ++ ++  D        +  GK+
Sbjct: 364 SCELAKSNKMAREFIKNGAVSINGEKQTDSEVILQKLDALFGKYTVIKRGKR 415


>gi|145300655|ref|YP_001143496.1| tyrosyl-tRNA synthetase [Aeromonas salmonicida subsp. salmonicida
           A449]
 gi|142853427|gb|ABO91748.1| tyrosyl-tRNA synthetase [Aeromonas salmonicida subsp. salmonicida
           A449]
          Length = 433

 Score =  463 bits (1192), Expect = e-128,   Method: Composition-based stats.
 Identities = 150/426 (35%), Positives = 225/426 (52%), Gaps = 12/426 (2%)

Query: 2   PAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
           P      L  LS+RG + Q S+P  L    +    T Y G+D TA SLH GHL  L++L 
Sbjct: 11  PMINPHLLDELSQRGLVAQNSDPAALADHLATSR-TVYCGFDPTAGSLHIGHLVPLLMLR 69

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKT 121
             Q  GH P++L+GG T +IGDPSF+   R +  +  +   +  +     + +    G +
Sbjct: 70  RFQLAGHTPVALVGGATGLIGDPSFKATERSLNSADTVLGWVASLSAQIRALLPADDGLS 129

Query: 122 DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQ 180
              ++NN  W+  +  +D LR+IG  FSVN ML+ ESVR RL R +Q +SF EF+Y +LQ
Sbjct: 130 APQLVNNGDWMGQMSALDFLRDIGKHFSVNAMLARESVRQRLARPDQGISFTEFSYALLQ 189

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           +YDF  L +   C LQ+GG+DQWGNI  G+DL  RL   ++  +T PL+T A GTK GKT
Sbjct: 190 SYDFAVLHQRLGCTLQIGGNDQWGNITSGMDLTRRLHQAQVHGMTLPLITKADGTKFGKT 249

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEA 298
             GA+WL+  +TSPY F+Q+W    D DV  F +  + + +SEID       Q +   +A
Sbjct: 250 EGGAVWLDPALTSPYAFYQFWLGTADEDVYRFLRYYSFMSLSEIDALEEEDAQRQGRKQA 309

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGL 352
           ++++A E+T +VHG+         +   F   +          +    +    VS    L
Sbjct: 310 QQVLANELTELVHGKAALAAVQRISELLFSGDVVRLGESDLAQLAQDGMPSSTVSGETDL 369

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           ++L+V  G A S   AR  L + AI +N +I  +E  Q+  ++      + L  GKK + 
Sbjct: 370 VSLLVSCGLANSKRIARELLAAGAISLNGTIRQDE--QLSAEERLFDRYLLLRRGKKQYQ 427

Query: 413 ICHLCG 418
           +    G
Sbjct: 428 LVAWLG 433


>gi|153837418|ref|ZP_01990085.1| tyrosyl-tRNA synthetase [Vibrio parahaemolyticus AQ3810]
 gi|149749218|gb|EDM60003.1| tyrosyl-tRNA synthetase [Vibrio parahaemolyticus AQ3810]
          Length = 419

 Score =  463 bits (1192), Expect = e-128,   Method: Composition-based stats.
 Identities = 155/422 (36%), Positives = 228/422 (54%), Gaps = 24/422 (5%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L +RG I Q S+  E+  L SQ   T Y G+D TA SLH GHL  L++L   Q  G
Sbjct: 5   LLQDLQDRGLIAQASDLEEIQTLLSQ-PQTVYCGFDPTAGSLHIGHLVPLIMLKRFQDAG 63

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+ ++L+GG T +IGDPSF+   R +  ++ +   +  +       + +   K    M+N
Sbjct: 64  HQAVALIGGATGMIGDPSFKATERSLNSAEIVSGWVNDLSNQIQQLMNHQLSKPMI-MVN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDFVE 186
           N  W+ +I  ID  R++G  FS+N M++ ESV+ RL+R +Q +SF EF+Y +LQ+YDF E
Sbjct: 123 NADWMKAINVIDFFRDVGKHFSINTMINRESVKQRLQRPDQGISFTEFSYALLQSYDFAE 182

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + Y CRLQ+GG+DQWGNI+ GIDL  R    ++F LT PL+T + GTK GKT  GA+W
Sbjct: 183 LNRQYGCRLQIGGNDQWGNIVSGIDLTRRQNGEQVFGLTLPLITKSDGTKFGKTEGGAVW 242

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE--INEAKKIIAT 304
           L+   TSPY F+Q+W   +DADV  F +  T L   EI  +           +A++I+A 
Sbjct: 243 LDPSKTSPYAFYQFWLGAEDADVYHFLRYYTFLSCEEIASIEAQDQASQGKPQAQRILAE 302

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHS-----------QHMPTISISKDEVSRGMGLL 353
           E+T  VHG E    A       F  ++               +P+I       S    L+
Sbjct: 303 EMTRFVHGEEGLASAERITQALFSGNVQQLSLGELKQLELDGLPSIE------SAQQDLV 356

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            L++++G A+S   AR H+ +NAI +N   +S +   +    FD      L  GKK+  +
Sbjct: 357 ELLIESGLASSKRIAREHISNNAISVNGEKMSADNPSLSFPLFD--QYWLLQRGKKHFCL 414

Query: 414 CH 415
             
Sbjct: 415 VK 416


>gi|332685978|ref|YP_004455752.1| tyrosyl-tRNA synthetase [Melissococcus plutonius ATCC 35311]
 gi|332369987|dbj|BAK20943.1| tyrosyl-tRNA synthetase [Melissococcus plutonius ATCC 35311]
          Length = 418

 Score =  463 bits (1192), Expect = e-128,   Method: Composition-based stats.
 Identities = 141/425 (33%), Positives = 225/425 (52%), Gaps = 23/425 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L+ R  I+Q ++ + L     +  ++ Y G D T  S+H GHL   M++   Q  
Sbjct: 2   NIIDELTWRDAINQQTDAQGLREQTEEASISLYCGVDPTGDSMHIGHLIPFMMMKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P  L+GGGT  IGDPS R   R +   +++Q N++ +       +K      +   +
Sbjct: 62  GHHPYILIGGGTGTIGDPSGRKTERVLQTMEQVQHNVDSLTKQM---LKLFGKDANVTFV 118

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  I  ++ LR+ G  F++N ML+ + V SRL  E  +SF EF Y ILQ+ DF+ 
Sbjct: 119 NNYDWLSKISLLEFLRDYGKNFNINTMLAKDIVASRL--EVGISFTEFTYQILQSIDFLH 176

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK--LFALTSPLLTTASGTKMGKTLSGA 244
           L K ++ +LQ+GG+DQWGNI  G+DL  +L+ P+  +F LT PL+  A GTK GKT  GA
Sbjct: 177 LYKTFNVQLQIGGADQWGNITAGLDLIRKLEGPETNVFGLTIPLMLKADGTKFGKTAGGA 236

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKII 302
           +WL+ + TSP+ F+Q+W N DD DVV + K  T L  +EI+ +A+      E  EA++ +
Sbjct: 237 VWLDAKKTSPFEFYQFWLNQDDRDVVKYLKFFTFLSQAEIEELAEKIKTNPEKREAQRRL 296

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGL 352
           A E+T  VH +EE  +A       F  +I            + MPT+ IS    S+   +
Sbjct: 297 AEEVTRFVHSQEELAEAQKITAALFSGNIKELNAQEIEQGFEKMPTVEIS----SKPENI 352

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           + +++      S  +AR  + + AI IN   +++ +  +          + +  GKK + 
Sbjct: 353 VDMLISTKIEPSKRQAREDISNGAISINGDKVTDLEATVDPTSHFDGKFVVIRKGKKKYF 412

Query: 413 ICHLC 417
           +  + 
Sbjct: 413 LAKVV 417


>gi|23335281|ref|ZP_00120518.1| COG0162: Tyrosyl-tRNA synthetase [Bifidobacterium longum DJO10A]
 gi|189439665|ref|YP_001954746.1| tyrosyl-tRNA synthetase [Bifidobacterium longum DJO10A]
 gi|213692733|ref|YP_002323319.1| tyrosyl-tRNA synthetase [Bifidobacterium longum subsp. infantis
           ATCC 15697]
 gi|227546218|ref|ZP_03976267.1| tyrosine--tRNA ligase [Bifidobacterium longum subsp. infantis ATCC
           55813]
 gi|239622221|ref|ZP_04665252.1| tyrosyl-tRNA synthetase [Bifidobacterium longum subsp. infantis
           CCUG 52486]
 gi|296453812|ref|YP_003660955.1| tyrosyl-tRNA synthetase [Bifidobacterium longum subsp. longum
           JDM301]
 gi|312133067|ref|YP_004000406.1| tyrs [Bifidobacterium longum subsp. longum BBMN68]
 gi|317481829|ref|ZP_07940857.1| tyrosyl-tRNA synthetase [Bifidobacterium sp. 12_1_47BFAA]
 gi|322688773|ref|YP_004208507.1| tyrosyl-tRNA synthase [Bifidobacterium longum subsp. infantis 157F]
 gi|322690764|ref|YP_004220334.1| tyrosyl-tRNA synthase [Bifidobacterium longum subsp. longum JCM
           1217]
 gi|254783569|sp|B3DSX9|SYY_BIFLD RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|254783570|sp|B7GTN2|SYY_BIFLI RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|189428100|gb|ACD98248.1| Tyrosyl-tRNA synthetase [Bifidobacterium longum DJO10A]
 gi|213524194|gb|ACJ52941.1| tyrosyl-tRNA synthetase [Bifidobacterium longum subsp. infantis
           ATCC 15697]
 gi|227213199|gb|EEI81071.1| tyrosine--tRNA ligase [Bifidobacterium longum subsp. infantis ATCC
           55813]
 gi|239514218|gb|EEQ54085.1| tyrosyl-tRNA synthetase [Bifidobacterium longum subsp. infantis
           CCUG 52486]
 gi|296183243|gb|ADH00125.1| tyrosyl-tRNA synthetase [Bifidobacterium longum subsp. longum
           JDM301]
 gi|311774060|gb|ADQ03548.1| TyrS [Bifidobacterium longum subsp. longum BBMN68]
 gi|316916766|gb|EFV38160.1| tyrosyl-tRNA synthetase [Bifidobacterium sp. 12_1_47BFAA]
 gi|320455620|dbj|BAJ66242.1| tyrosyl-tRNA synthase [Bifidobacterium longum subsp. longum JCM
           1217]
 gi|320458891|dbj|BAJ69512.1| tyrosyl-tRNA synthase [Bifidobacterium longum subsp. infantis ATCC
           15697]
 gi|320460109|dbj|BAJ70729.1| tyrosyl-tRNA synthase [Bifidobacterium longum subsp. infantis 157F]
          Length = 440

 Score =  463 bits (1192), Expect = e-128,   Method: Composition-based stats.
 Identities = 140/420 (33%), Positives = 216/420 (51%), Gaps = 20/420 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L  RG I Q ++   L    +   +T Y G+D TA+SLH G+L QL+ +  LQ  G
Sbjct: 15  LLEELEWRGLISQSTDRDRLAEALNGEPITYYCGFDPTAASLHIGNLVQLINMRHLQLAG 74

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H PI+L+GG T +IGDP    E R +     +    +++K      +    G      ++
Sbjct: 75  HHPIALVGGATGLIGDPRQSGE-RTLNPKDVVAGWADRLKNQIGGILD-TEGANAVRFVS 132

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W  S+  ID LR++G  F +  ML+ ++V  RL  E+ +SF EF+Y +LQ  DF+ L
Sbjct: 133 NYDWTASMTVIDFLRDVGKNFRLGTMLAKDTVARRLNSEEGISFTEFSYQVLQGNDFLHL 192

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
              Y C L++GGSDQWGN+  G+DL  +++   +   TSP++T ASG K GK+   A+WL
Sbjct: 193 FDEYHCTLELGGSDQWGNLTSGLDLIHKVRGVDVNVFTSPIITDASGKKFGKSEGNAVWL 252

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIATE 305
           +  M SPY F+Q+W N  D ++ S  K  T LP +EI+R+ +         EA+K +A E
Sbjct: 253 DATMLSPYKFYQFWINRPDVEMESLLKAFTFLPKAEIERLVEESKTNPGKREAQKTLAWE 312

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISK--------DEVSR--------G 349
           +T+ VHG    + A  A+   F    + + +   ++          DE           G
Sbjct: 313 VTSFVHGEAATQAAIDASGALFGRGGNLEDIDEETLESVLDGFKVVDENGEHVFPVSKPG 372

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
             ++     AG   S +EARR +KS  + +NN+ I +E+  +   DF +     +  GKK
Sbjct: 373 DRVIDAAQAAGLFKSASEARRAIKSGGVYLNNNRIEDEEQVLAEADFLAGRFALIRRGKK 432


>gi|116333090|ref|YP_794617.1| tyrosyl-tRNA synthetase [Lactobacillus brevis ATCC 367]
 gi|116098437|gb|ABJ63586.1| tyrosyl-tRNA synthetase [Lactobacillus brevis ATCC 367]
          Length = 419

 Score =  463 bits (1192), Expect = e-128,   Method: Composition-based stats.
 Identities = 144/425 (33%), Positives = 209/425 (49%), Gaps = 22/425 (5%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            +  L  RG I+Q ++   L  L  +  V  Y G D T  S+H GHL   M+L   Q  G
Sbjct: 3   IIDELKWRGAINQQTDEAGLAELVDEKSVGLYAGIDPTGDSMHIGHLIPFMILKRFQLAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+P  L+GG T  IGDPS +   R +    ++  N   +                  ++N
Sbjct: 63  HRPHILIGGATGSIGDPSGKKAERVLQTMDQVHHNEACLTKQMEHLFGQD---GSFKIVN 119

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  +  +D LR+ G  F+VN ML+ E V SRL  E  +S+ EF Y ILQ+ DF+ L
Sbjct: 120 NYDWLSKVSLLDFLRDYGKLFNVNNMLNKEVVASRL--EVGISYTEFTYQILQSIDFLHL 177

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKLFALTSPLLTTASGTKMGKTLSGAI 245
            +  D +LQ+GG+DQWGNI  GIDL  + K    K + LT PLL  A GTK GK+  G I
Sbjct: 178 YEAEDVQLQIGGADQWGNITAGIDLIHKQKGADAKAYGLTIPLLLKADGTKFGKSEGGNI 237

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIA 303
           WL+ E TSPY F+Q+W N DD DV+ F K  T L   EI ++A       E  EA+  +A
Sbjct: 238 WLDPEKTSPYEFYQFWINTDDRDVIKFLKYFTFLDQDEIKQLADAVATHPEKREAQIRLA 297

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLL 353
            E+T  VHG+E   +A       F   + +          + MP +++S  + +    L+
Sbjct: 298 EEVTAFVHGKEAVVEAQHITKALFSGDVAALTASEIEQGFKKMPAVTVSPAKKNIVEWLV 357

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
                    +S  +AR  L + AI+IN   +++   +I          + +  GKK + +
Sbjct: 358 D---DTQIESSRRQAREDLTNGAIRINGEKVTDTDAEIDPTSAFDGKFVIVRRGKKRYFL 414

Query: 414 CHLCG 418
             + G
Sbjct: 415 ARVVG 419


>gi|332639171|ref|ZP_08418034.1| tyrosyl-tRNA synthetase [Weissella cibaria KACC 11862]
          Length = 419

 Score =  463 bits (1192), Expect = e-128,   Method: Composition-based stats.
 Identities = 155/425 (36%), Positives = 223/425 (52%), Gaps = 25/425 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D L  L+ RG I+Q ++   L    ++  +  Y+G D T  S+H GHL   M+L   Q  
Sbjct: 4   DILQELAWRGAINQTTDEDGLREQMTKEQIGVYVGIDPTGDSMHIGHLIPFMILKRFQLA 63

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           G KP+ ++GG T  IGDPS +   R+++  +++  N+EKI+           G+    ++
Sbjct: 64  GQKPVIVVGGATGSIGDPSGKKSERKLLSQEDVAANVEKIRAQMVKLF----GEDGFTIV 119

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  +  +D+LRE G  FS+N ML+ + V SRL  E  +SF EF Y ILQ+ DF E
Sbjct: 120 NNFDWLGKLSLLDMLREYGKLFSINTMLAKDVVASRL--EAGISFTEFTYQILQSIDFHE 177

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKLFALTSPLLTTASGTKMGKTLSGA 244
           L K  + RLQ+GGSDQWGNI  GIDL  +L+      F LT PLL  A GTK GKT  GA
Sbjct: 178 LWKRENVRLQVGGSDQWGNITGGIDLIHKLEGGEAPAFGLTVPLLLKADGTKFGKTEGGA 237

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKII 302
           +WL+ E T+P+ F+Q+W N  D+DV    K  T L   EI  +     +      A++ +
Sbjct: 238 VWLDPEKTTPFEFYQFWLNTADSDVEKMLKYFTFLSQDEISALVADLQENAAARNAQRRL 297

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQ-----------HMPTISISKDEVSRGMG 351
           A E+TT VHG E  + A T     F  +  ++           ++PT  I   E    +G
Sbjct: 298 AQEVTTFVHGAEAVKTAETMTKVLFGNADVAELTTEEVAILAGNVPTFEIDNAE----IG 353

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           LL L+V AG   S   AR+ +K  AI+IN   I++E+  I          + +  GKK  
Sbjct: 354 LLDLVVAAGLEKSKTAARKSVKDGAIRINGEQITDEEAVINPTAKYDGQYVIVKRGKKKW 413

Query: 412 IICHL 416
            +  +
Sbjct: 414 AVAVV 418


>gi|257457309|ref|ZP_05622480.1| tyrosyl-tRNA synthetase [Treponema vincentii ATCC 35580]
 gi|257445231|gb|EEV20303.1| tyrosyl-tRNA synthetase [Treponema vincentii ATCC 35580]
          Length = 406

 Score =  463 bits (1192), Expect = e-128,   Method: Composition-based stats.
 Identities = 173/406 (42%), Positives = 243/406 (59%), Gaps = 7/406 (1%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L  L +RGF  Q ++   L  L  +G VT YIG D T  SLH GHL     L  L+  GH
Sbjct: 5   LQTLIDRGFFQQCTDVEALSALMDKGPVTFYIGTDPTGGSLHIGHLVPQFALRHLRDAGH 64

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
             I+L+GGGT  IGDPS + E R+M+  +++ EN+EKIK     FI +      A   NN
Sbjct: 65  IGIALLGGGTGRIGDPSGKTEMRKMLDYRQLDENVEKIKAQLDRFIGFD--GKTAFPENN 122

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
           + WL  + YID LR+IGS FSVN+MLSFE+ + R+  E  LSFLEFNY +LQ+YDF+ L 
Sbjct: 123 KNWLADLNYIDFLRDIGSCFSVNKMLSFEAYKIRM--ETGLSFLEFNYQLLQSYDFLMLH 180

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
           + + C LQ+GG DQWGNI+ G+DL  R    ++F LT PL+T + G KMGK+  GA++L+
Sbjct: 181 QKHHCCLQIGGDDQWGNIVAGVDLVRRKTGDEVFGLTFPLITRSDGKKMGKSEKGALFLD 240

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITT 308
           KEMT  ++F+QYWRN+DDADV  F    T LP+ EIDR+       INEAK+ +A E+T 
Sbjct: 241 KEMTPVFDFFQYWRNVDDADVRRFMLLFTFLPIEEIDRIC---AGNINEAKERLAWEVTK 297

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
            +HG++EA+ A   A   F        MPT+ +++    +G+ ++ L V++G   + ++A
Sbjct: 298 EIHGKDEADTALAGAKAAFGGGGDKSAMPTVEMNRAVFEQGIPVVDLFVQSGLCATKSDA 357

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           RR ++          +++ K  I     D TG + L  GKK  I  
Sbjct: 358 RRLIEQGGALAAGQPVTDFKAVITAAVLDKTGELILRAGKKRFIRI 403


>gi|163753361|ref|ZP_02160485.1| putative tyrosyl-tRNA synthetase 1 [Kordia algicida OT-1]
 gi|161327093|gb|EDP98418.1| putative tyrosyl-tRNA synthetase 1 [Kordia algicida OT-1]
          Length = 434

 Score =  463 bits (1191), Expect = e-128,   Method: Composition-based stats.
 Identities = 152/435 (34%), Positives = 230/435 (52%), Gaps = 25/435 (5%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L  RG IH I    E     ++ + TAYIG+D T+ SLH G L  ++LL  L K
Sbjct: 3   SNLVEELRWRGMIHDIMPGTE--EQLNKEMTTAYIGFDPTSDSLHIGSLVPIILLMHLHK 60

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKPI+L+GG T +IGDPS + + R ++    +  N+  IK + S F+ +G  + +A +
Sbjct: 61  AGHKPIALVGGATGMIGDPSGKSDERNLLTEDILNHNVAGIKRVLSRFLDFGGSEANAPI 120

Query: 126 -LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL-KREQSLSFLEFNYMILQAYD 183
            +NN  W+    +ID  R++G   +VN M++ +SV+ RL      +SF EF Y ++Q YD
Sbjct: 121 LVNNYDWMKDFSFIDFARDVGKRITVNYMMAKDSVKKRLSDEGNGMSFTEFTYQLIQGYD 180

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP---KLFALTSPLLTTASGTKMGKT 240
           F  L K ++C LQMGGSDQWGNI  G +L  R+ T    K +A+T PL+T A G+K GKT
Sbjct: 181 FYHLHKAHNCLLQMGGSDQWGNITTGTELVRRMNTEEAAKAYAMTCPLITKADGSKFGKT 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEA 298
             G +WL+ + TS Y F+Q+W N  DAD   + K  T L    ID +     +       
Sbjct: 241 AGGNVWLDADKTSVYKFYQFWLNTSDADAEKYIKIFTFLDKETIDALIAEHKEAPHTRAL 300

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKD 344
           +K +A E+TT+VH +E+ E A  A    F  S                   +P   I + 
Sbjct: 301 QKRLAEEVTTLVHSKEDLENAQKATQILFGKSTSEDLKQLDEQTFMDVFDGVPQAEIERA 360

Query: 345 EVSRGMG-LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
           ++  G+  +  L  K  F  S  EARR LK N++ +N + +  E  +I   D  +   + 
Sbjct: 361 DIEEGLDMIAALAAKTNFLASNGEARRALKENSVAVNKTKVK-EDYKITTSDLINDKFVT 419

Query: 404 LSFGKKNHIICHLCG 418
           +  G+K + +  + G
Sbjct: 420 IQRGRKKNFLLIVKG 434


>gi|159037519|ref|YP_001536772.1| tyrosyl-tRNA synthetase [Salinispora arenicola CNS-205]
 gi|157916354|gb|ABV97781.1| tyrosyl-tRNA synthetase [Salinispora arenicola CNS-205]
          Length = 428

 Score =  463 bits (1191), Expect = e-128,   Method: Composition-based stats.
 Identities = 137/423 (32%), Positives = 213/423 (50%), Gaps = 12/423 (2%)

Query: 2   PAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
           P  +      L  RG I   +   EL  L     +T Y+G+D TA SLH G+L Q++   
Sbjct: 8   PPGRDTLFDDLRWRGLIQDSTGLDELRALLDGPGMTFYVGFDPTAPSLHVGNLMQVVTAR 67

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKT 121
            LQ  GH+P+ L+GG T  IGDP      R +   + +   + +I+   + F+ Y  G  
Sbjct: 68  RLQLAGHRPLLLVGGATGQIGDPK-ESAERVLNPPEVVAGWLARIRDQLAPFVSYQ-GAN 125

Query: 122 DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA 181
            A ++NN  W   +  ++ LR++G  F VNRML+ E +R+RL+    +SF EF+Y +LQA
Sbjct: 126 AARLVNNLDWTGEMSVVEFLRDVGKHFPVNRMLAREVIRARLES--GVSFTEFSYQLLQA 183

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            DF EL + + CRLQ GGSDQWGNI  G+D   R     + A T+PL+T + G K GKT 
Sbjct: 184 NDFFELHRRHGCRLQFGGSDQWGNITAGVDYTRRRGAGPVEAFTTPLVTRSDGMKFGKTE 243

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAK 299
             AIWL+ E+TSPY F+Q+W N DD DV  + +  +    +E++       +      A+
Sbjct: 244 GEAIWLDSELTSPYAFYQFWVNADDRDVARYLRYFSFRSRAELEALEKEAAERPAARVAQ 303

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI------SISKDEVSRGMGLL 353
           + +A E+TT+VHG  E  +   A+   F      +  P +            +     ++
Sbjct: 304 RALAEELTTLVHGEREMAQVVAASQALFGRGSLGELSPAVLRAALTEAGLVHLDELPDVV 363

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            L+ ++G   S  EARR +      +NN+ + + +  +   D      + L  GK++   
Sbjct: 364 GLLKESGLVPSNKEARRVIAEGGAYLNNNRVMSAEAVVAPDDLLHGRYLVLRRGKRSFAG 423

Query: 414 CHL 416
             L
Sbjct: 424 IEL 426


>gi|331007993|ref|ZP_08331036.1| Tyrosyl-tRNA synthetase [gamma proteobacterium IMCC1989]
 gi|330418199|gb|EGG92822.1| Tyrosyl-tRNA synthetase [gamma proteobacterium IMCC1989]
          Length = 433

 Score =  463 bits (1191), Expect = e-128,   Method: Composition-based stats.
 Identities = 159/430 (36%), Positives = 239/430 (55%), Gaps = 20/430 (4%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +D ++ L  RG + QI+     +   ++   T Y G+D TA SLH G L  L+ L   Q 
Sbjct: 5   ADLIADLRARGLVAQITREEVFESYLTEEARTLYCGFDPTADSLHIGSLVPLLTLRRFQL 64

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+ + R++     I+E +EK+K   S FI +  G+  A +
Sbjct: 65  AGHKPLALVGGATGLIGDPSFKAQERKLNTPDVIEEWVEKLKRQISGFIDFECGEASAEV 124

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDF 184
           +NN  W   +  +D LR++G  FS+N M++ ESV+ RL R  + +SF EF YM+LQ+YDF
Sbjct: 125 VNNLDWTKDLNILDFLRDVGKHFSINNMVNKESVKQRLDRDGEGISFTEFTYMLLQSYDF 184

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
            EL + Y C LQ+GGSDQWGNI  G+DL  R    ++F LT PL+T + GTK GKT SG 
Sbjct: 185 SELYQRYGCTLQIGGSDQWGNITGGVDLARRQHGGQVFGLTMPLVTKSDGTKFGKTESGT 244

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKII 302
           IWL+ + TSPY F+Q+W N  DADV +F +  T L ++EI+ + +   Q     +A+KI+
Sbjct: 245 IWLDPQKTSPYAFYQFWVNTADADVYTFLRYFTFLDVAEIEAIEEADRQASGRPQAQKIL 304

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIH-----------SQHMPTISISKDEVSRGMG 351
           A E+T +VHG +    A       F   +               +PT S+   ++S+ + 
Sbjct: 305 AEEVTRLVHGEDSLLAAQRITEALFSGGVDQLNLSDMQQLQQDGLPTTSLEGLDLSKEI- 363

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNE-----KLQIKLQDFDSTGNIKLSF 406
           L  L+V +G A +  + +  L  NAI +N   + +E     +    L          +  
Sbjct: 364 LTNLLVSSGVAKNGKQVKDALSRNAIVVNGVPVPSETSVGLEGVFSLASARYARFFVVRL 423

Query: 407 GKKNHIICHL 416
           GKKN+ +  L
Sbjct: 424 GKKNYHLFTL 433


>gi|320096300|ref|ZP_08027871.1| tyrosine--tRNA ligase [Actinomyces sp. oral taxon 178 str. F0338]
 gi|319976766|gb|EFW08538.1| tyrosine--tRNA ligase [Actinomyces sp. oral taxon 178 str. F0338]
          Length = 420

 Score =  463 bits (1191), Expect = e-128,   Method: Composition-based stats.
 Identities = 145/425 (34%), Positives = 224/425 (52%), Gaps = 19/425 (4%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +D +  L  RG + Q ++   L    + G VT Y GYD TA SLH GHL QL+++  LQ 
Sbjct: 2   TDIIDELQWRGLLAQHTDLAALREHLASGPVTFYCGYDPTAPSLHHGHLVQLIVMRHLQL 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T  IGDP    E R++  ++ +Q   +K++   S F+ +  G   A M
Sbjct: 62  AGHKPLALVGGATGQIGDPRQSGE-RQLQPTEVVQGWAQKLRDQISRFLDF-EGPAAARM 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  W   +  IDLLR IG +F V  ML+ + V  R+  ++ +S+ EF+Y +LQA DF+
Sbjct: 120 VNNLDWTQQMSAIDLLRTIGKYFRVGTMLNKDIVARRIASDEGISYTEFSYQVLQANDFL 179

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           EL + Y C L+ GG+DQWGN++ G+DL  ++       +T+P++T A GTK GK+  GAI
Sbjct: 180 ELFRRYGCTLETGGNDQWGNMVGGVDLIHKVDGADAHVMTTPIITKADGTKFGKSEGGAI 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIA 303
           WL+ +M SPY F+Q+W  + D DVV F K  T L  + I+ +        ++  A+K +A
Sbjct: 240 WLDPQMMSPYAFYQFWLQVSDEDVVRFLKIFTFLDRARIEELEAEVAARPHQRAAQKALA 299

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQ-----------HMPTISISKDEVSRGMGL 352
             +T+MVHG +E  +   A    +      +            +P  S+   E      +
Sbjct: 300 AAVTSMVHGDQELARVQAATKALWGGGDIKELDEASLRAATADLPRASVPLGE----ASV 355

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
              +V  GF    + ARR + S  + +NN  +S+    +   D        L  G+KN  
Sbjct: 356 ADALVAVGFERGKSAARRTVASGGVSVNNVRVSDADAPLTGSDALPGSLALLRKGRKNLA 415

Query: 413 ICHLC 417
           +  L 
Sbjct: 416 VVELA 420


>gi|330827948|ref|YP_004390900.1| Tyrosyl-tRNA synthetase [Aeromonas veronii B565]
 gi|328803085|gb|AEB48284.1| Tyrosyl-tRNA synthetase [Aeromonas veronii B565]
          Length = 421

 Score =  463 bits (1191), Expect = e-128,   Method: Composition-based stats.
 Identities = 147/417 (35%), Positives = 221/417 (52%), Gaps = 12/417 (2%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L+ERG + Q S+   L    +    T Y G+D TA SLH GHL  L++L   Q  G
Sbjct: 6   LLDELTERGLVAQNSDTAALADHLAT-PRTVYCGFDPTAGSLHIGHLVPLLMLRRFQLAG 64

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H P++L+GG T +IGDPSF+   R +  +  +Q  +  +     + +    G +   ++N
Sbjct: 65  HTPVALVGGATGLIGDPSFKATERSLNSTDTVQGWVASLSAQIRALLPADEGLSAPQLVN 124

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDFVE 186
           N  W+  +  +D LR+IG  FSVN ML+ ESVR RL R +Q +SF EF+Y +LQ+YDF  
Sbjct: 125 NGDWMGQMSALDFLRDIGKHFSVNAMLARESVRQRLARPDQGISFTEFSYALLQSYDFAV 184

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L +   C LQ+GG+DQWGNI  G+DL  RL   ++  +T PL+T A GTK GKT  GA+W
Sbjct: 185 LHQRLGCTLQIGGNDQWGNITSGMDLTRRLHQAQVHGMTLPLITKADGTKFGKTEGGAVW 244

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIAT 304
           L+  +TSPY F+Q+W    D DV  F +  + + +SEID +     K     +A++++A 
Sbjct: 245 LDPALTSPYAFYQFWLGTADEDVYRFLRYYSFMSLSEIDALEAEDAKRQGRKQAQQVLAN 304

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTLIVK 358
           E+T +VHG+         +   F   +          +    +    VS    L++L+V 
Sbjct: 305 ELTELVHGKAALAAVQRISELLFSGDVARLGESDLAQLAQDGMPCSTVSGETDLVSLLVS 364

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            G A S   AR  L + AI +N  +  ++  Q+   D      + L  GKK + +  
Sbjct: 365 CGLANSRRIARELLAAGAISLNGVLKQDD--QLSATDRLFGRYLLLRRGKKQYHLVE 419


>gi|303236124|ref|ZP_07322726.1| tyrosine--tRNA ligase [Prevotella disiens FB035-09AN]
 gi|302483706|gb|EFL46699.1| tyrosine--tRNA ligase [Prevotella disiens FB035-09AN]
          Length = 432

 Score =  463 bits (1191), Expect = e-128,   Method: Composition-based stats.
 Identities = 143/432 (33%), Positives = 225/432 (52%), Gaps = 27/432 (6%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
            +F+  L  RG + QI    E      + +V+AY+G D TA SLH GHL  +M+L  LQ 
Sbjct: 2   KNFVEELKWRGMLAQIMPGTE--EFLQKNMVSAYLGTDPTADSLHIGHLCGIMMLRHLQL 59

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK-TDAL 124
            GHKP  L+GG T +IGDPS + + R ++ ++ +  N E IK   S F+ + + +   A 
Sbjct: 60  CGHKPYLLIGGATGMIGDPSGKSQERNLLDAETLYHNQEAIKKQVSKFLDFDSNEPNKAE 119

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQAY 182
           M+NN  W+    ++D  R +G   +VN M++ +SV+ RL  E    LSF EF Y +LQ Y
Sbjct: 120 MVNNYDWMKEFSFLDFARTVGKHITVNYMMAKDSVKRRLNGEASDGLSFTEFTYQLLQGY 179

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL--KTPKLFALTSPLLTTASGTKMGKT 240
           DF+   + +  +LQ+GG+DQWGN+  G +L  R   +  + F LT PL+T A G K GKT
Sbjct: 180 DFLYQYEKFGVKLQLGGNDQWGNMTTGTELIRRTLGQEAEAFCLTCPLITKADGKKFGKT 239

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEA 298
            SG IWL++  T+PY F+Q+W N+ D D   + K  T+L  + ID + +   ++      
Sbjct: 240 ESGNIWLDRNRTTPYAFYQFWLNVSDNDAEKYIKIFTSLDKATIDSLIEEHRQDPGRRTL 299

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKD 344
           ++ +A E+T MVH +E+ + A  A+   F  S                 + +P   ISKD
Sbjct: 300 QRRLAEEVTRMVHSQEDLDMAIAASNILFGKSTKENLLQLDEQTFNDVFKDVPHYEISKD 359

Query: 345 EVSRGMGLLTLIVKAG--FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNI 402
            +  G   + +  + G     S +E R+ +K   + +N   +      I  +D      +
Sbjct: 360 LL--GQPAVEVFNQEGMQIFPSKSEMRKLVKGGGVSLNKEKLQAFDQVITAEDLIDGKYL 417

Query: 403 KLSFGKKNHIIC 414
            +  GKKN+ + 
Sbjct: 418 LMQKGKKNYFLV 429


>gi|58616779|ref|YP_195978.1| tyrosyl-tRNA synthetase [Ehrlichia ruminantium str. Gardel]
 gi|75356543|sp|Q5FF40|SYY_EHRRG RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|58416391|emb|CAI27504.1| Tyrosyl-tRNA synthetase [Ehrlichia ruminantium str. Gardel]
          Length = 418

 Score =  463 bits (1191), Expect = e-128,   Method: Composition-based stats.
 Identities = 206/413 (49%), Positives = 285/413 (69%), Gaps = 1/413 (0%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
            KS FL +L  RG+ +Q ++  ELD L S+  V AYIG+D TA SLH G L Q+M+L +L
Sbjct: 3   LKSGFLGLLYSRGYFNQCTDLAELDQLMSKECVIAYIGFDCTARSLHIGSLMQIMILRYL 62

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           QK GHKPI L+G GT+ IGDPS +D+SR ++ S +IQEN   I+ +   FI  G G +DA
Sbjct: 63  QKCGHKPIVLLGNGTTKIGDPSGKDKSRTLLSSSDIQENTLGIRKVLEKFIVCGDGVSDA 122

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           L++ N  WL  + YID LR IG  FSVN ML+F+SV+ RL+REQ+LSFLEFNYM+LQAYD
Sbjct: 123 LLVYNAEWLDKLNYIDFLRNIGRHFSVNNMLTFDSVKLRLEREQNLSFLEFNYMLLQAYD 182

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+EL + Y+C LQ+GGSDQWGNI+ G++LG +LK P+LF LT+ LL T++G KMGKT +G
Sbjct: 183 FIELNQRYNCLLQIGGSDQWGNIVNGVELGRKLKLPQLFGLTTHLLLTSTGEKMGKTANG 242

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIA 303
           A+WL+ EM SP ++WQY+RN+ D DV  F +  T LP++EI+++  L+G EINEAKKI+A
Sbjct: 243 AVWLDGEMYSPADYWQYFRNVKDEDVGRFLRLFTELPLTEIEKLENLKGYEINEAKKILA 302

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
           TE T + HG + A+  A  A++ F+ + HS  +P   + K E+  G+ ++ L+  +G   
Sbjct: 303 TEATRICHGEKIAQDIAYDALKVFECNDHS-GLPVFYVCKSEIELGLSVVKLLQVSGMEK 361

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           S + A+R +     KIN+ II +   ++ LQDF     IKLS GKK H+   L
Sbjct: 362 SNSSAKRLINDKGCKINDIIILDVNYKLSLQDFCGMSYIKLSCGKKRHLKVVL 414


>gi|260769578|ref|ZP_05878511.1| tyrosyl-tRNA synthetase [Vibrio furnissii CIP 102972]
 gi|260614916|gb|EEX40102.1| tyrosyl-tRNA synthetase [Vibrio furnissii CIP 102972]
          Length = 420

 Score =  463 bits (1191), Expect = e-128,   Method: Composition-based stats.
 Identities = 151/419 (36%), Positives = 225/419 (53%), Gaps = 13/419 (3%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L+ RG I Q ++  EL  L S+   T Y G+D TA SLH GHL  L++L   Q  G
Sbjct: 6   LFHDLTARGLIAQSTSLDELTALFSE-PQTLYCGFDPTAGSLHIGHLVPLLMLKRFQDAG 64

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+ I+L+GG T +IGDPSF+   R +  +Q +Q+ ++ ++   +  +     +     +N
Sbjct: 65  HQAIALIGGATGMIGDPSFKATERTLNSAQTVQQWVDDLRQQITHTMTPHLTQPLRC-VN 123

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDFVE 186
           N  W   +  ID  R+IG  FSVN M++ ESV+ RL R +Q +SF EF+Y +LQ++DF  
Sbjct: 124 NADWTGQVNVIDFFRDIGKHFSVNAMINRESVKQRLARPDQGISFTEFSYSLLQSFDFAH 183

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + + CRLQ+GG+DQWGNI+ GIDL  RL    +  LT PL+T + GTK GKT  GA+W
Sbjct: 184 LNREHQCRLQIGGNDQWGNIVSGIDLTRRLNNETVHGLTLPLITKSDGTKFGKTEGGAVW 243

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE--INEAKKIIAT 304
           L+   TSPY F+Q+W N DDADV  F +  T L + EI R+           +A++I+A 
Sbjct: 244 LDASKTSPYAFYQFWLNTDDADVYRFLRYYTFLSVDEIARIEAEDAARSGKPQAQQILAE 303

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHS---QHMPTIS---ISKDEVSRGMGLLTLIVK 358
            IT  VHG      A   +   F  ++       +  +    +    VS    ++ L++ 
Sbjct: 304 NITAFVHGEAGLASAQRISDALFSGAVAQLSRDELAQLELDGLPCTTVSTADDVVELLIA 363

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           +  A+S  +AR  L + AI++N   +++  L      FD      L  GKK   +  L 
Sbjct: 364 SQLASSKRQAREWLANGAIRVNGEKMADADLSHSFALFD--RYYLLQRGKKQFALIKLS 420


>gi|305666159|ref|YP_003862446.1| tyrosyl-tRNA synthetase [Maribacter sp. HTCC2170]
 gi|88707657|gb|EAQ99898.1| tyrosyl-tRNA synthetase [Maribacter sp. HTCC2170]
          Length = 418

 Score =  462 bits (1190), Expect = e-128,   Method: Composition-based stats.
 Identities = 152/420 (36%), Positives = 224/420 (53%), Gaps = 23/420 (5%)

Query: 17  FIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGG 76
            +H      E       G+ +AY+G D TA SLH GHL  +M+L   Q  GHKP +L+GG
Sbjct: 1   MLHDAMPGTE--EHLMTGMQSAYVGIDPTADSLHIGHLVGVMMLRHFQLAGHKPYALLGG 58

Query: 77  GTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM-LNNETWLCSI 135
            T +IGDPS + E R ++    ++ N E ++   S F+ + +   +A + +NN  W+   
Sbjct: 59  ATGMIGDPSGKSEERNLLDEATLRLNQEALRAQLSRFLDFDSEDENAAILVNNYDWMKDF 118

Query: 136 KYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQAYDFVELAKNYDC 193
            ++D +R+IG   +VN M++ +SV+ RL  E    +SF EF Y ++Q YDF+ L +N +C
Sbjct: 119 SFLDFIRDIGKHITVNYMMAKDSVKKRLSAESKDGMSFTEFTYQLVQGYDFLHLYQNNNC 178

Query: 194 RLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTS 253
            LQMGGSDQWGNI  G +L  R+   K +ALT PL+T A GTK GKT  G +WL+   TS
Sbjct: 179 TLQMGGSDQWGNITTGTELIRRIGGGKGYALTCPLITKADGTKFGKTEGGNVWLDAHRTS 238

Query: 254 PYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKIIATEITTMVH 311
           PY F+QYW N  D D   + K  T L   EID       +   +   +K +A EIT MVH
Sbjct: 239 PYKFYQYWLNTSDTDAEKYIKIFTFLTKEEIDGLISEHQESPHLRVLQKRLADEITVMVH 298

Query: 312 GREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDEVSRGMGLL-TLI 356
            +E+ + A  A+   F  S                   +P  +ISK E+  G+ ++  L 
Sbjct: 299 SQEDLDNAKKASNILFGRSTSEDLKTLDEKTFLDVFDGVPQANISKSELESGLDMIGALA 358

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            K GF +S  EARR LK N+I +N   + +    I   D  +   + L  G++N+ +  +
Sbjct: 359 AKTGFLSSNGEARRELKQNSISVNKEKVKD-DYMITSTDLINDRFVLLQKGRRNYFVLVV 417


>gi|88855472|ref|ZP_01130136.1| tyrosyl-tRNA synthetase [marine actinobacterium PHSC20C1]
 gi|88815379|gb|EAR25237.1| tyrosyl-tRNA synthetase [marine actinobacterium PHSC20C1]
          Length = 451

 Score =  462 bits (1190), Expect = e-128,   Method: Composition-based stats.
 Identities = 136/418 (32%), Positives = 216/418 (51%), Gaps = 11/418 (2%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L+ RG +H  ++   L  L     +T Y G+D TA SLH G+L QL+L+  LQ  G
Sbjct: 36  LWDELTWRGLVHVSTDADALKELLEGDPITYYCGFDPTAPSLHLGNLVQLLLMRRLQLAG 95

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+P+ L+GG T +IGDP      R +  ++ + E +  ++   S F+    G     M+N
Sbjct: 96  HRPLGLVGGATGLIGDPRP-TAERTLNDNETVAEWVSYLQAQVSKFLS-AEGDNAVRMVN 153

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W   +  ID LR++G +F V  M+  ++V +RL  +  +S+ EF+Y ++Q  DF+EL
Sbjct: 154 NLDWTSPMSAIDFLRDVGKYFRVGTMIKKDAVSARLNSDAGISYTEFSYQVMQGMDFLEL 213

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            ++Y C LQ GGSDQWGN+  G DL  + +   + A+ +PL+T + GTK GK+   A+WL
Sbjct: 214 YRSYGCVLQTGGSDQWGNLTSGTDLIHKAEGASVHAIGTPLITNSDGTKFGKSEGNAVWL 273

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIATE 305
           +  MTSPY F+Q+W N DDADVV   K  T      I  +           EA+K +A E
Sbjct: 274 DDAMTSPYAFYQFWLNTDDADVVQRLKIFTFFSRERISELETAVADAPFRREAQKTLAFE 333

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI------SISKDEVSRGMGLLTLIVKA 359
           +T++VHGR+  E A +A+   F     +             ++  E +    ++ L+V  
Sbjct: 334 VTSLVHGRDATEAAISASAALFGQGELASLDAETLAAALRELAHVESAGDSTIVQLLVDT 393

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
              +S +EARR +    + +NN  +++++  +   D        L  GKK      + 
Sbjct: 394 KLVSSASEARRAISQGGVYLNNIAVADDQATVG-SDLLPGNVAVLRRGKKTLAGIFVT 450


>gi|110637940|ref|YP_678147.1| tyrosyl-tRNA synthetase [Cytophaga hutchinsonii ATCC 33406]
 gi|123163593|sp|Q11UV9|SYY_CYTH3 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|110280621|gb|ABG58807.1| tyrosyl-tRNA synthetase [Cytophaga hutchinsonii ATCC 33406]
          Length = 427

 Score =  462 bits (1190), Expect = e-128,   Method: Composition-based stats.
 Identities = 151/430 (35%), Positives = 222/430 (51%), Gaps = 24/430 (5%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
            +F+  L  RG +H I    E      +   TAY+G+D TASSL  G+L  +M+L   Q 
Sbjct: 2   KNFVEELKWRGMLHDIMPGTE--EYLLKNQTTAYVGFDPTASSLTIGNLVTIMMLVHFQH 59

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH P++L+GG T +IGDPS R E R  +  + ++ N E I+   + F+ +  G   A +
Sbjct: 60  AGHIPMALVGGATGMIGDPSGRSEERNFLSEETLRLNQEGIRKQLTKFLDFDCGANSAKL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  W   I +++ LR+ G   +VN M++ +SV+ RL  E  L+F EF+Y +LQ YDF 
Sbjct: 120 VNNYDWFKGIGFLEFLRDAGKHLTVNYMMAKDSVKKRL--EVGLTFTEFSYQLLQGYDFC 177

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L +  + RLQMGGSDQWGNI  G +L  R+     FALT+PLLT A GTK GK+  G I
Sbjct: 178 HLYQKENVRLQMGGSDQWGNITSGTELIRRMADGTAFALTTPLLTKADGTKFGKSAGGNI 237

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIA 303
           WL+  +TSPY F+Q+W N  D DV  F +  T L    I+ +     K  +E   +K +A
Sbjct: 238 WLDAALTSPYKFYQFWLNSADEDVSRFIRIFTLLSKEAIEALEAEHAKAPHERLLQKTLA 297

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDEVSRG 349
            +IT  VH  E+ E A  A+   F  S+                + +P I IS+  +   
Sbjct: 298 KDITIRVHSEEDYEMAIKASEILFGKSVTEDLQALNESTLLSVFEGIPLIEISRSILDEK 357

Query: 350 MGLLTL---IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
             +L L   +  +    S  EAR+ ++   + IN   I N   +I          + +  
Sbjct: 358 PSVLDLLSTLTNSEVFPSKGEARKMIQGGGVSINKIKI-NSSEEIVNYPLLLNNYLLVQK 416

Query: 407 GKKNHIICHL 416
           GKKN+ +   
Sbjct: 417 GKKNYYLLRF 426


>gi|262167141|ref|ZP_06034855.1| tyrosyl-tRNA synthetase [Vibrio cholerae RC27]
 gi|262024441|gb|EEY43128.1| tyrosyl-tRNA synthetase [Vibrio cholerae RC27]
          Length = 426

 Score =  462 bits (1190), Expect = e-128,   Method: Composition-based stats.
 Identities = 150/421 (35%), Positives = 221/421 (52%), Gaps = 13/421 (3%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L +RG I Q +    L    +      Y G+D TA SLH GHL  L++L   Q  G
Sbjct: 6   LFDDLQQRGLIAQSTPLEALVERFAT-PQVLYCGFDPTAGSLHIGHLVPLLMLKRFQNAG 64

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM-L 126
           H+ I+L+GG T +IGDPSF+   R +  +Q +Q+ +  +    +  +   +    +LM +
Sbjct: 65  HQAIALIGGATGMIGDPSFKANERVLNSAQTVQQWVSDLSQQITQLMVSQSENCASLMTV 124

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDFV 185
           NN  W+  I  ID  R++G  FSVN M++ ESV+ RL R +Q +SF EF+Y +LQ+YDF 
Sbjct: 125 NNADWIGKINLIDFFRDVGKHFSVNTMINRESVKQRLARPDQGISFTEFSYSLLQSYDFA 184

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L + + C LQ+GG+DQWGNI+ GIDL  RL   ++  LT PL+T + GTK GKT SGA+
Sbjct: 185 HLNREFGCALQIGGNDQWGNIVSGIDLTRRLNGAEVCGLTLPLITKSDGTKFGKTESGAV 244

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIA 303
           WL    TSPY F+Q+W N DDADV  F    T L  +EI+ + +         +A++I+A
Sbjct: 245 WLESSKTSPYRFYQFWLNSDDADVYRFLAYYTFLSTAEIEEIRQADALRAGKPQAQQILA 304

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRGMGLLTLIV 357
             +T  VHG E    A       F   +    +  ++      +     SR   LL  ++
Sbjct: 305 EHVTRFVHGEEGLAAAQRITQALFSGDVSYLSLSELAQLELDGLPCVAASRSDSLLDFLL 364

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            +G A+S  +AR  L++ AI++N   +  E   +            L  GKK   +  L 
Sbjct: 365 SSGLASSKRQAREWLENGAIRVNGERVQQEG--VLSGFALFDRYYVLQRGKKQFALIKLE 422

Query: 418 G 418
           G
Sbjct: 423 G 423


>gi|281424608|ref|ZP_06255521.1| tyrosine--tRNA ligase [Prevotella oris F0302]
 gi|281401279|gb|EFB32110.1| tyrosine--tRNA ligase [Prevotella oris F0302]
          Length = 443

 Score =  462 bits (1190), Expect = e-128,   Method: Composition-based stats.
 Identities = 139/434 (32%), Positives = 224/434 (51%), Gaps = 27/434 (6%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
            +F+  L  RG + QI    E        +V+AY+G D TA SLH GHL  +M+L  LQ+
Sbjct: 13  KNFVEELKWRGMLAQIMPGTE--EYLQSNMVSAYLGTDPTADSLHIGHLCGIMMLRHLQR 70

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG-TGKTDAL 124
            GHKP  L+GG T +IGDPS + + R ++ ++ +  N E IK   + F+ +       A 
Sbjct: 71  CGHKPYLLVGGATGMIGDPSGKSQERNLLDTKTLYHNQEAIKKQVAKFLDFDGNEPNKAE 130

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQAY 182
           ++NN  W+    ++D  RE+G   +VN M++ +SV+ RL  E    LSF EF Y +LQ Y
Sbjct: 131 LVNNYDWMKDFTFLDFAREVGKHITVNYMMAKDSVQKRLNGEARDGLSFTEFTYQLLQGY 190

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKLFALTSPLLTTASGTKMGKT 240
           DF+ L +++  RLQ+GG+DQWGN+  G +L  R      + F LT PL+T A G K GKT
Sbjct: 191 DFLYLYQHHGVRLQLGGNDQWGNMTTGTELIRRTLGNEAEAFCLTCPLITKADGRKFGKT 250

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEA 298
            SG +WL++  T+PY F+Q+W N+ D+D   + K  T L    ID +     ++      
Sbjct: 251 ESGNVWLDRNRTTPYAFYQFWLNVSDSDAERYIKIFTDLDKETIDALIADHQQDPGRRIL 310

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKD 344
           +K +A E+TTMVH +E+ + A  A+   F  +  +              + +P  ++ + 
Sbjct: 311 QKRLAEEVTTMVHSKEDLDMAIAASNILFGKATKNSLAQLDEATLNDVFKDVPHYTVDRS 370

Query: 345 EVSRGMGLLTLIV--KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNI 402
            +  G   + +    +     S +E R+ +K   + +N   +S     +   D      +
Sbjct: 371 LL--GSPAVDVFNQEEMDIFPSKSEMRKLVKGGGVSLNKEKLSAFDQLVTTDDLIDNKYL 428

Query: 403 KLSFGKKNHIICHL 416
            +  GKKN+ +  +
Sbjct: 429 LVQRGKKNYYLITV 442


>gi|119025932|ref|YP_909777.1| tyrosyl-tRNA synthetase [Bifidobacterium adolescentis ATCC 15703]
 gi|189083644|sp|A1A1W2|SYY_BIFAA RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|118765516|dbj|BAF39695.1| tyrosyl-tRNA synthetase [Bifidobacterium adolescentis ATCC 15703]
          Length = 435

 Score =  462 bits (1190), Expect = e-128,   Method: Composition-based stats.
 Identities = 137/421 (32%), Positives = 220/421 (52%), Gaps = 15/421 (3%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L  RG I Q ++   L    +   +T Y G+D TA+SLH G+L QL+ +  LQ  G
Sbjct: 15  VLDELEWRGLISQSTDRDRLAEALNGEPITYYCGFDPTAASLHIGNLVQLINMRHLQAAG 74

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H PI+L+GG T +IGDP    E R +     +    +++K      ++   G      ++
Sbjct: 75  HHPIALVGGATGLIGDPRQSGE-RTLNPKDVVAGWADRLKKQIGGILE-TEGSNPVRFVS 132

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W  S+  ID LR++G  F +  ML+ ++V  RL  E+ +SF EF+Y +LQ  DF+ L
Sbjct: 133 NYDWTASMNVIDFLRDVGKNFRMGTMLAKDTVARRLNSEEGISFTEFSYQVLQGNDFLHL 192

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
              Y C L++GGSDQWGN+  G+DL  +++   +   TSP++T A G K GK+   A+WL
Sbjct: 193 FDEYHCVLEIGGSDQWGNLTSGLDLIHKVRGVDVNVFTSPIITDAQGKKFGKSEGNAVWL 252

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIATE 305
           +  M SPY F+Q+W N  D+++ +  K  T LP +EI+R+ +         EA++ +A E
Sbjct: 253 DGTMLSPYKFYQFWFNRPDSEMENLLKAFTFLPKAEIERLIEESKTNPGAREAQRTLAWE 312

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISK-----------DEVSRGMGLLT 354
           +T+ VHG E   +A  AA   F        +   ++              +V+ G  +  
Sbjct: 313 VTSFVHGEEATRQAIEAAGALFGRGGDLADIDESTLEAAIDGMKVDGEFAKVAAGDRVAE 372

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
             +KAG   S +EAR+ +KS  + +NN+ + +E+  ++  DF     + +  GKK   + 
Sbjct: 373 AGMKAGLFKSISEARKTIKSGGVYLNNTRVEDEEQTLQEGDFLHGRFVLIRRGKKALGVV 432

Query: 415 H 415
            
Sbjct: 433 E 433


>gi|257069302|ref|YP_003155557.1| tyrosyl-tRNA synthetase [Brachybacterium faecium DSM 4810]
 gi|256560120|gb|ACU85967.1| tyrosyl-tRNA synthetase [Brachybacterium faecium DSM 4810]
          Length = 422

 Score =  462 bits (1189), Expect = e-128,   Method: Composition-based stats.
 Identities = 145/421 (34%), Positives = 224/421 (53%), Gaps = 12/421 (2%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L+ RG + Q +    L    + G V+ Y G+D TA+SLH GHLTQ++ +  LQ  G
Sbjct: 4   VLDELAWRGLVVQTTGREALGSALADGPVSLYCGFDPTAASLHVGHLTQVLTMRRLQLAG 63

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H P +L+GG T +IGDP    E R +  S+ +   +E ++   S F+    G+    M+N
Sbjct: 64  HHPYALVGGATGLIGDPRMSGE-RVLNDSEIVATWVESLRDQISRFLDL-EGEYGVTMVN 121

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W+  +  +D LR++G  F +  ML+ ++V  RL+ ++ +S+ EF+Y +LQ  D++EL
Sbjct: 122 NLDWIGQMSALDFLRDMGKHFRMGTMLAKDTVARRLQSDEGISYTEFSYQVLQGIDYLEL 181

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            + +   LQ GG+DQWGN++ G+DL  +++   + ALT+PL+T A G+K GK+  GA+WL
Sbjct: 182 HRRHGVTLQYGGNDQWGNLLSGVDLIHKVEGHDVHALTTPLVTKADGSKFGKSEGGAVWL 241

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATE 305
           + E+TSPY F Q+W N  DADV+++ +  T     EI     A         A+K +A +
Sbjct: 242 DAELTSPYAFHQFWLNAADADVLNYLRFFTFRSREEIAELEHATETASHQRAAQKALADD 301

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI------SISKDEVSRGMGLLTLIVKA 359
           ITTMVHG +   +A  AA   F      +            +   EV+    L+     A
Sbjct: 302 ITTMVHGEQATSQAKAAAAVLFGRGDVRELDEQTLLAIARELPGAEVAPTTLLVDAFCDA 361

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF--DSTGNIKLSFGKKNHIICHLC 417
           G   S   ARR  +   + +N   IS E LQ +  D      G++ L  G+KN  +  L 
Sbjct: 362 GITASKGAARRDAQGGGLSVNGEKISAEDLQRESGDLAPLPGGHLLLRRGRKNAAMVRLN 421

Query: 418 G 418
           G
Sbjct: 422 G 422


>gi|258540208|ref|YP_003174707.1| tyrosyl-tRNA synthetase [Lactobacillus rhamnosus Lc 705]
 gi|257151884|emb|CAR90856.1| Tyrosyl-tRNA synthetase [Lactobacillus rhamnosus Lc 705]
          Length = 423

 Score =  462 bits (1189), Expect = e-128,   Method: Composition-based stats.
 Identities = 147/431 (34%), Positives = 219/431 (50%), Gaps = 24/431 (5%)

Query: 1   MPAFKSD-FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLML 59
           M   +    L  L  RG ++Q+++   L  L  +  V+ Y G D T  SLH GHL   M+
Sbjct: 1   MTETQRGQILDELKWRGALNQLTDEAGLRKLTEEKAVSVYCGTDPTGDSLHVGHLIPFMI 60

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG 119
           L   Q  GH+P+ L+GGGT  IGDPS R+  R +   + I  N +K+     +      G
Sbjct: 61  LKRFQLMGHRPVILIGGGTGSIGDPSGRNSERVLQTMETIATNKKKLTAQMENLF----G 116

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
             D  +++N  WL  I  +D LR+ G  FSVN ML+ E V SRL  E  +S+ EF Y IL
Sbjct: 117 TDDFRIVDNYDWLSKISMLDFLRDYGKLFSVNNMLNKEVVASRL--ETGISYTEFTYQIL 174

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK--LFALTSPLLTTASGTKM 237
           Q+ DF+ L K+ D +LQ+GG+DQWGNI  GIDL  RL+ P    + LT+PL+  A GTK 
Sbjct: 175 QSVDFLHLFKHEDVQLQIGGADQWGNITAGIDLIHRLEGPDARAYGLTNPLMLKADGTKF 234

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEI 295
           GK+  GA+WL+ E TSPY F+Q+W N DDADV  F K  T L   EI  + +      E 
Sbjct: 235 GKSAGGAVWLDPEKTSPYEFYQFWFNQDDADVEKFLKFFTFLSRDEIAELVEATKTHPEK 294

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDE 345
             A++ +A  +T  VHG++  ++A + +   F   +            +  PT+   +  
Sbjct: 295 RAAQRELARAVTKFVHGQKAVDQAESISAALFSGDVADLSADDIKQGFKQFPTVEAPQTA 354

Query: 346 VSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLS 405
            +    L+          S  +AR  +++ AI IN +   +   ++          + + 
Sbjct: 355 ENIVTWLVD---TTKIEPSRRQAREDIQNGAITINGTRQRDLDFEVDPSTHFDGQYVIVR 411

Query: 406 FGKKNHIICHL 416
            GKK + +  +
Sbjct: 412 RGKKRYFLVKI 422


>gi|89095105|ref|ZP_01168031.1| tyrosyl-tRNA synthetase [Oceanospirillum sp. MED92]
 gi|89080600|gb|EAR59846.1| tyrosyl-tRNA synthetase [Oceanospirillum sp. MED92]
          Length = 432

 Score =  462 bits (1189), Expect = e-128,   Method: Composition-based stats.
 Identities = 158/429 (36%), Positives = 234/429 (54%), Gaps = 20/429 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L  RG + Q+++  EL+   ++G VT Y G+D TA SLH G L  L+ L   Q+ G
Sbjct: 5   LLQDLKARGLVAQMTSEEELEKHLAEGSVTLYCGFDPTADSLHIGSLVPLLTLKRFQEFG 64

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKP++L+GG T +IGDPSF+ + R++     +   +EK+K   S+F+ + +G   A ++N
Sbjct: 65  HKPLALVGGATGLIGDPSFKAQERKLNDDSTVAGWVEKLKAQVSAFVDFESGANSAEVVN 124

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDFVE 186
           N  W  ++  +  LR+IG  FSVN+M++ ESV+ R+ RE + +SF EF YMILQ+YDF +
Sbjct: 125 NLDWTQNVDILSFLRDIGKHFSVNQMIAKESVKQRIDREGEGISFTEFTYMILQSYDFQQ 184

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L  +++C LQ+GGSDQWGNI  G +L  R+   ++F LT PL+T + GTK GKT SG IW
Sbjct: 185 LNASHNCTLQIGGSDQWGNITGGTELTRRMNGNQVFGLTLPLITKSDGTKFGKTESGTIW 244

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIAT 304
           L+   TSPY F+Q+W    DADV  F K  T L +SEID + K   +     EA++++A 
Sbjct: 245 LDANKTSPYAFYQFWLQTADADVYRFLKYFTFLSVSEIDALEKEDAERQGRPEAQRVLAE 304

Query: 305 EITTMVHGREEAEKAATAAMECFDMS-----------IHSQHMPTISISKDEVSRGMGLL 353
           E+T +VHG E    A       F              +    +P+  +    V+    L 
Sbjct: 305 EVTHLVHGEEGLAAAKRITEALFSGDTSNLSEQDYAQLAQDGLPSSELDVSAVAE-QPLT 363

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSI-----ISNEKLQIKLQDFDSTGNIKLSFGK 408
           T++  AG A S  + +  L+ NA+ +N        I N                 +  GK
Sbjct: 364 TILSDAGMAPSGKQVKDALQRNAVIVNGKAHGLDDIMNATGVFSKDAALFERYFLVKLGK 423

Query: 409 KNHIICHLC 417
           K H +  L 
Sbjct: 424 KKHHLFWLV 432


>gi|199599074|ref|ZP_03212480.1| Tyrosyl-tRNA synthetase [Lactobacillus rhamnosus HN001]
 gi|199590037|gb|EDY98137.1| Tyrosyl-tRNA synthetase [Lactobacillus rhamnosus HN001]
          Length = 423

 Score =  462 bits (1189), Expect = e-128,   Method: Composition-based stats.
 Identities = 147/431 (34%), Positives = 219/431 (50%), Gaps = 24/431 (5%)

Query: 1   MPAFKSD-FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLML 59
           M   +    L  L  RG ++Q+++   L  L  +  V+ Y G D T  SLH GHL   M+
Sbjct: 1   MTETQQGQILDELKWRGALNQLTDESGLRKLTEEKAVSVYCGTDPTGDSLHVGHLIPFMI 60

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG 119
           L   Q  GH+P+ L+GGGT  IGDPS R+  R +   + I  N +K+     +      G
Sbjct: 61  LKRFQLMGHRPVILIGGGTGSIGDPSGRNSERVLQTMETIATNKKKLTAQMENLF----G 116

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
             D  +++N  WL  I  +D LR+ G  FSVN ML+ E V SRL  E  +S+ EF Y IL
Sbjct: 117 TDDFRIVDNYDWLSKISMLDFLRDYGKLFSVNNMLNKEVVASRL--ETGISYTEFTYQIL 174

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK--LFALTSPLLTTASGTKM 237
           Q+ DF+ L K+ D +LQ+GG+DQWGNI  GIDL  RL+ P    + LT+PL+  A GTK 
Sbjct: 175 QSVDFLHLFKHEDVQLQIGGADQWGNITAGIDLIHRLEGPDARAYGLTNPLMLKADGTKF 234

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEI 295
           GK+  GA+WL+ E TSPY F+Q+W N DDADV  F K  T L   EI  + +      E 
Sbjct: 235 GKSAGGAVWLDPEKTSPYEFYQFWFNQDDADVEKFLKFFTFLSRDEIAELVEATKTHPEK 294

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDE 345
             A++ +A  +T  VHG++  ++A + +   F   +            +  PT+   +  
Sbjct: 295 RAAQRELARAVTKFVHGQKAVDQAESISAALFSGDVADLSADDIKQGFKQFPTVEAPQTA 354

Query: 346 VSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLS 405
            +    L+          S  +AR  +++ AI IN +   +   ++          + + 
Sbjct: 355 ENIVTWLVD---TTKIEPSRRQAREDIQNGAITINGTRQRDLDFEVDPSTHFDGQYVIVR 411

Query: 406 FGKKNHIICHL 416
            GKK + +  +
Sbjct: 412 RGKKRYFLVKI 422


>gi|261337854|ref|ZP_05965738.1| tyrosine--tRNA ligase [Bifidobacterium gallicum DSM 20093]
 gi|270277323|gb|EFA23177.1| tyrosine--tRNA ligase [Bifidobacterium gallicum DSM 20093]
          Length = 440

 Score =  462 bits (1189), Expect = e-128,   Method: Composition-based stats.
 Identities = 137/420 (32%), Positives = 220/420 (52%), Gaps = 20/420 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L  RG ++Q ++   L    +   +T Y G+D TA+SLH G+L QL+L+  LQ+ G
Sbjct: 15  VLDELEWRGLVNQSTDRDRLAAALNGEPITYYCGFDPTAASLHIGNLVQLILMRHLQEAG 74

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H PI+L+GG T +IGDP    E R +     + +  E++K      +    G      ++
Sbjct: 75  HHPIALVGGATGLIGDPRQSGE-RTLNAKSIVAQWAERLKRQIGGIL-VVDGPNATRFVS 132

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W  ++  ID LR++G  F +  ML+ ++V  RL  E  +SF EF+Y +LQ  D++ L
Sbjct: 133 NYDWTANMNVIDFLRDVGKNFRLGTMLAKDTVARRLDSEDGISFTEFSYQVLQGNDYLHL 192

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
              YDC L+ GGSDQWGN+  G+DL  +++   +  +T+P++T A G K GK+   AIWL
Sbjct: 193 YDEYDCTLETGGSDQWGNLTSGLDLIHKVRGVDVNVMTTPIITDAQGKKFGKSEGNAIWL 252

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIATE 305
           + +M S Y F+Q+W N  DA++ S  K  T LP  EI+R+           EA++++A E
Sbjct: 253 DADMLSVYKFYQFWFNRPDAEMESLLKAFTFLPKDEIERLVNESETNPGAREAQRVLAWE 312

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISK----------------DEVSRG 349
           +T++VHG E  + A  A+   F        +   ++                    V+ G
Sbjct: 313 VTSLVHGDEATKHAIEASTALFGRGGDVTSIDEQTLEAALEGVKIDMEDGTKAFAPVAEG 372

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
             ++   VKAG   S +EAR+ ++S  + +NN  + +E+  +  +DF       +  GKK
Sbjct: 373 DRIIEAAVKAGLVKSMSEARKTIRSGGLYLNNVRVEDEEATLNGEDFLHGRFALIRRGKK 432


>gi|262403909|ref|ZP_06080466.1| tyrosyl-tRNA synthetase [Vibrio sp. RC586]
 gi|262349871|gb|EEY99007.1| tyrosyl-tRNA synthetase [Vibrio sp. RC586]
          Length = 426

 Score =  462 bits (1189), Expect = e-128,   Method: Composition-based stats.
 Identities = 153/421 (36%), Positives = 222/421 (52%), Gaps = 13/421 (3%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L +RG I Q +    L    +      Y G+D TA SLH GHL  L++L   Q  G
Sbjct: 6   LFDDLQQRGLIAQSTPLEALVERFTT-PQVLYCGFDPTAGSLHIGHLVPLLMLKRFQNAG 64

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM-L 126
           H+ I+L+GG T +IGDPSF+   R +  +Q +Q+ +  +    +  +   +     L+ +
Sbjct: 65  HQAIALIGGATGMIGDPSFKANERVLNSAQTVQQWVSDLSQQITQLMTSQSENLAPLITV 124

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDFV 185
           NN  W+  I  ID  R++G  FSVN M++ ESV+ RL R +Q +SF EF+Y +LQ+YDF 
Sbjct: 125 NNADWIGKINLIDFFRDVGKHFSVNTMINRESVKQRLARPDQGISFTEFSYSLLQSYDFA 184

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L + + C LQ+GG+DQWGNI+ GIDL  RL   ++  LT PL+T + GTK GKT SGA+
Sbjct: 185 HLNREFGCALQIGGNDQWGNIVSGIDLTRRLNGVEVCGLTLPLITKSDGTKFGKTESGAV 244

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIA 303
           WL    TSPY F+Q+W N DDADV  F    T L  +EI+  R A        +A++I+A
Sbjct: 245 WLESSKTSPYRFYQFWLNSDDADVYRFLAYYTFLSSAEIEGIRQADALRTGKPQAQQILA 304

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRGMGLLTLIV 357
            ++T  VHG E    A       F   +    +  +S      +     SR   LL L++
Sbjct: 305 EQVTRFVHGEEGLAAAQRITQALFSGDVSYLSLSELSQLELDGLPCVAASRSDTLLDLLI 364

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            +G A+S  +AR  L++ AI++N   +  E   +            L  GKK   +  L 
Sbjct: 365 TSGLASSKRQAREWLENGAIRVNGERVQQEG--VLSGFALFDRYYVLQRGKKQFALIKLD 422

Query: 418 G 418
           G
Sbjct: 423 G 423


>gi|255037053|ref|YP_003087674.1| tyrosyl-tRNA synthetase [Dyadobacter fermentans DSM 18053]
 gi|254949809|gb|ACT94509.1| tyrosyl-tRNA synthetase [Dyadobacter fermentans DSM 18053]
          Length = 433

 Score =  462 bits (1189), Expect = e-128,   Method: Composition-based stats.
 Identities = 149/431 (34%), Positives = 224/431 (51%), Gaps = 28/431 (6%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           DF+  L  RG +H +           + +   YIG+D TA SLH G+L  +MLL   Q+ 
Sbjct: 4   DFIEELRWRGMLHDMMPGT--HEQLQKEMTCGYIGFDPTAPSLHIGNLATIMLLVHFQRA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKPI+L+GG T +IGDPSF+   R  +    ++ N E I+    SF+ + +G   A M+
Sbjct: 62  GHKPIALVGGATGMIGDPSFKAAERSFLDEDTLRINQEGIRKQLESFLDFNSGDNSAEMV 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I ++  LR+ G + SVN M+S +SV+ RL  E  +SF EF+Y +LQ YDF  
Sbjct: 122 NNYDWFKDIGFLQFLRDAGKYLSVNYMMSKDSVKKRL--ETGISFTEFSYQLLQGYDFYH 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP-----KLFALTSPLLTTASGTKMGKTL 241
           L K+ + RLQMGGSDQWGNI  G ++  R +       K +ALT+PL+T A G+K GK+ 
Sbjct: 180 LYKHKNVRLQMGGSDQWGNITTGTEIIRRKEGDDEGYFKAYALTTPLVTKADGSKFGKSE 239

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAK 299
            G IWL+ E TSPY F+Q+W N  D D+  + +  +     EI+ +      E      +
Sbjct: 240 GGNIWLDPERTSPYQFYQFWLNQSDDDMPRYLRVFSLKGREEIEALETSHAAEPHLRVMQ 299

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDE 345
           K +A E+T  +H  +  +    A+   F  +                   +P   IS++E
Sbjct: 300 KALAAELTIRIHSEKAYQTVLKASEVLFGKATLETLQSIEIDEFDAIFDGVPQTEISREE 359

Query: 346 VSRGMGLLTL---IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNI 402
                 +L L   + K+    S  EARR ++ NA+ +N   +++E   +          +
Sbjct: 360 WDNAANVLDLVSTVTKSEIYPSKGEARRAIQQNAVSVNKVKVTSEAQVLSEFALLQDKFL 419

Query: 403 KLSFGKKNHII 413
            +S GKKNH+I
Sbjct: 420 LISKGKKNHLI 430


>gi|121728594|ref|ZP_01681615.1| tyrosyl-tRNA synthetase [Vibrio cholerae V52]
 gi|147673691|ref|YP_001215991.1| tyrosyl-tRNA synthetase [Vibrio cholerae O395]
 gi|121629150|gb|EAX61593.1| tyrosyl-tRNA synthetase [Vibrio cholerae V52]
 gi|146315574|gb|ABQ20113.1| tyrosyl-tRNA synthetase [Vibrio cholerae O395]
 gi|227012318|gb|ACP08528.1| tyrosyl-tRNA synthetase [Vibrio cholerae O395]
          Length = 434

 Score =  462 bits (1189), Expect = e-128,   Method: Composition-based stats.
 Identities = 150/421 (35%), Positives = 221/421 (52%), Gaps = 13/421 (3%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L +RG I Q +    L    +      Y G+D TA SLH GHL  L++L   Q  G
Sbjct: 14  LFDDLQQRGLIAQSTPLEALVERFAT-PQVLYCGFDPTAGSLHIGHLVPLLMLKRFQNAG 72

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM-L 126
           H+ I+L+GG T +IGDPSF+   R +  +Q +Q+ +  +    +  +   +    +LM +
Sbjct: 73  HQAIALIGGATGMIGDPSFKANERVLNSAQTVQQWVSDLSQQITQLMVSQSENCASLMTV 132

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDFV 185
           NN  W+  I  ID  R++G  FSVN M++ ESV+ RL R +Q +SF EF+Y +LQ+YDF 
Sbjct: 133 NNADWIGKINLIDFFRDVGKHFSVNTMINRESVKQRLARPDQGISFTEFSYSLLQSYDFA 192

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L + + C LQ+GG+DQWGNI+ GIDL  RL   ++  LT PL+T + GTK GKT SGA+
Sbjct: 193 HLNREFGCALQIGGNDQWGNIVSGIDLTRRLNGAEVCGLTLPLITKSDGTKFGKTESGAV 252

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIA 303
           WL    TSPY F+Q+W N DDADV  F    T L  +EI+ + +         +A++I+A
Sbjct: 253 WLESSKTSPYRFYQFWLNSDDADVYRFLAYYTFLSTAEIEEIRQADALRAGKPQAQQILA 312

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRGMGLLTLIV 357
             +T  VHG E    A       F   +    +  ++      +     SR   LL  ++
Sbjct: 313 EHVTRFVHGEEGLAAAQRITQALFSGDVSYLSLSELAQLELDGLPCVAASRSDSLLDFLL 372

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            +G A+S  +AR  L++ AI++N   +  E   +            L  GKK   +  L 
Sbjct: 373 SSGLASSKRQAREWLENGAIRVNGERVQQEG--VLSGFALFDRYYVLQRGKKQFALIKLE 430

Query: 418 G 418
           G
Sbjct: 431 G 431


>gi|315182414|gb|ADT89327.1| tyrosyl-tRNA synthetase [Vibrio furnissii NCTC 11218]
          Length = 420

 Score =  462 bits (1189), Expect = e-128,   Method: Composition-based stats.
 Identities = 150/419 (35%), Positives = 224/419 (53%), Gaps = 13/419 (3%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L+ RG I Q ++  EL  L S+   T Y G+D TA SLH GHL  L++L   Q  G
Sbjct: 6   LFHDLTARGLIAQSTSLDELTALFSE-PQTLYCGFDPTAGSLHIGHLVPLLMLKRFQDAG 64

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+ I+L+GG T +IGDPSF+   R +  +Q +Q+ ++ ++   +  +     +     +N
Sbjct: 65  HQAIALIGGATGMIGDPSFKATERTLNSAQTVQQWVDDLRQQITRTMTPHLTQPLRC-VN 123

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDFVE 186
           N  W   +  ID  R+IG  FSVN M++ ESV+ RL R +Q +SF EF+Y +LQ++DF  
Sbjct: 124 NADWTGQVNVIDFFRDIGKHFSVNAMINRESVKQRLARPDQGISFTEFSYSLLQSFDFAH 183

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + + CRLQ+GG+DQWGNI+ GIDL  RL    +  LT PL+T + GTK GKT  GA+W
Sbjct: 184 LNREHQCRLQIGGNDQWGNIVSGIDLTRRLNNETVHGLTLPLITKSDGTKFGKTEGGAVW 243

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE--INEAKKIIAT 304
           L+   TSPY F+Q+W N DDADV  F +  T L + EI  +           +A++I+A 
Sbjct: 244 LDASKTSPYAFYQFWLNTDDADVYRFLRYYTFLSVDEIAHIEAEDAARSGKPQAQQILAE 303

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHS---QHMPTIS---ISKDEVSRGMGLLTLIVK 358
            IT  VHG      A   +   F  ++       +  +    +    VS    ++ L++ 
Sbjct: 304 NITAFVHGEAGLASAQRISDALFSGAVTQLSRDELAQLELDGLPCTTVSTADDVVELLIA 363

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           +  A+S  +AR  L + AI++N   +++  L      FD      L  GKK   +  L 
Sbjct: 364 SQLASSKRQAREWLANGAIRVNGEKMADADLSHSFALFD--RYYLLQRGKKQFALIKLS 420


>gi|326796181|ref|YP_004314001.1| tyrosyl-tRNA synthetase [Marinomonas mediterranea MMB-1]
 gi|326546945|gb|ADZ92165.1| Tyrosyl-tRNA synthetase [Marinomonas mediterranea MMB-1]
          Length = 434

 Score =  461 bits (1188), Expect = e-128,   Method: Composition-based stats.
 Identities = 160/435 (36%), Positives = 230/435 (52%), Gaps = 20/435 (4%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M    +D L+ L  RG I Q++   EL      G  T Y G+D TA SLH GHL  L++L
Sbjct: 1   MTVGINDLLADLQARGLIAQMTAEEELRAHLETGSRTLYCGFDPTADSLHLGHLVPLLVL 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GH PI+L+GG T +IGDPSF+   R++  +  +   ++KI+G  S F+++    
Sbjct: 61  KRFQDAGHNPIALVGGATGLIGDPSFKAAERQLNTADVVAGWVDKIRGQVSQFVQFDEVT 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMIL 179
             A ++NN  W   +  +D LREIG  FSVN M++ ESV+ RL RE   +SF EF+Y +L
Sbjct: 121 NPARVVNNLDWAGEMNVLDFLREIGKHFSVNAMINKESVQQRLNREGAGISFTEFSYALL 180

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK 239
           Q  DF EL + Y C LQ+GGSDQWGNI+ GIDL  R    ++F LT PL+T + GTK GK
Sbjct: 181 QGMDFAELNRAYGCTLQIGGSDQWGNIVGGIDLSRRQNQSQVFGLTVPLVTKSDGTKFGK 240

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE--INE 297
           T SGA+WL+ + TS Y F+Q+W N  DADV  F K  T L M EID + +   +     +
Sbjct: 241 TESGAVWLDPKKTSQYAFYQFWMNTADADVYKFLKYFTFLTMEEIDAIEQADKESTGKPQ 300

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS-----------QHMPTISISKDEV 346
            + I+A E T +VHG E    A       F                   +P+ S+ +  +
Sbjct: 301 GQSILAREATKLVHGEEGLAAAERITQALFSGKADQLSEQDLEQIKLDGLPSSSLVEANL 360

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSI--ISN---EKLQIKLQDFDSTGN 401
           +    L +L+ +AG A S  + +  L+ N++ +N     I++           +      
Sbjct: 361 AE-TPLTSLLAEAGLAASGKQVKDALQRNSVFVNGVAKGIADNMSASDIFAADNGYYGKY 419

Query: 402 IKLSFGKKNHIICHL 416
             +  GKK H +  L
Sbjct: 420 FLVKLGKKKHHLFTL 434


>gi|297181128|gb|ADI17326.1| tyrosyl-tRNA synthetase [uncultured actinobacterium HF0070_17F14]
 gi|297181219|gb|ADI17414.1| tyrosyl-tRNA synthetase [uncultured Verrucomicrobiales bacterium
           HF0070_30L02]
          Length = 424

 Score =  461 bits (1188), Expect = e-128,   Method: Composition-based stats.
 Identities = 147/418 (35%), Positives = 217/418 (51%), Gaps = 17/418 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  LS RG I   ++   L      G +T Y G+D TA SLH G+L  L+LL   Q  G
Sbjct: 10  ILDDLSARGLIQDTTDDAALRARLEAGPITLYCGFDPTADSLHVGNLVPLLLLRRFQDFG 69

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+PI+L GG T ++GDPS R + R ++  + +  N+  IK      +  G     A +++
Sbjct: 70  HRPIALAGGATGMVGDPSGRSDERNLLGGETLDHNLAAIKEQLCLLLDIG---GQAQLVD 126

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W+ ++  ++ LR+IG   +VN ML+ ES++SRL  EQ +S+ EF+YM+LQA DFV L
Sbjct: 127 NREWIENVTALEFLRDIGKLVTVNTMLAKESIKSRLDGEQGISYTEFSYMLLQANDFVSL 186

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
                C LQ+GGSDQWGNI  GID+  R        LT PL+T + G K GKT  GA+WL
Sbjct: 187 HDRNGCELQVGGSDQWGNITAGIDMIRRKTGAHAHGLTVPLVTRSDGAKFGKTADGAVWL 246

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKKIIATE 305
           + E T PY F QYW   DD DV  F  ++T LP   +  +        E   A++++A E
Sbjct: 247 SAERTLPYEFHQYWMRTDDRDVERFLMQMTLLPTEGVRDVMAEHLRAPEQRSAQRVLADE 306

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQH--------MPTISISKDEVSRGMGLLTLIV 357
           +T ++HG  E  +A  AA   F                +P   ++ D +     ++ L+V
Sbjct: 307 VTALIHGPGEVRRANLAAGALFGGDELDGEAIEALRGIVPETELAADTLIGEEPVVDLLV 366

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK-NHIIC 414
             G  +S  +ARR +    I++N   I++    + L D      + +  GKK  H+  
Sbjct: 367 ATGVCSSKGDARRTVDQGGIRLNGEKIADGTTAVTLVD---ERFVLIQKGKKQRHLAV 421


>gi|224283247|ref|ZP_03646569.1| tyrosyl-tRNA synthetase [Bifidobacterium bifidum NCIMB 41171]
 gi|311064520|ref|YP_003971245.1| tyrosyl-tRNA synthetase [Bifidobacterium bifidum PRL2010]
 gi|313140393|ref|ZP_07802586.1| tyrosyl-tRNA synthetase [Bifidobacterium bifidum NCIMB 41171]
 gi|310866839|gb|ADP36208.1| TyrS Tyrosyl-tRNA synthetase [Bifidobacterium bifidum PRL2010]
 gi|313132903|gb|EFR50520.1| tyrosyl-tRNA synthetase [Bifidobacterium bifidum NCIMB 41171]
          Length = 440

 Score =  461 bits (1188), Expect = e-128,   Method: Composition-based stats.
 Identities = 138/426 (32%), Positives = 217/426 (50%), Gaps = 20/426 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L  RG I Q ++ ++L    +   VT Y G+D TA+SLH G+L QL+ +  LQ  G
Sbjct: 15  VLEELEWRGLISQSTDRKQLAEALNGEPVTYYCGFDPTAASLHIGNLVQLINMRHLQAAG 74

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H PI+L+GG T +IGDP    E R +     +    E++K      ++   G      ++
Sbjct: 75  HHPIALVGGATGLIGDPRQSGE-RTLNPKDVVAGWAERLKRQIGGILE-TYGDNPVRFVS 132

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W   +  ID LR++G  F +  ML+ ++V  RL  E+ +SF EF+Y +LQ  DF+ L
Sbjct: 133 NYDWTAQMSVIDFLRDVGKNFRLGTMLAKDTVARRLNSEEGISFTEFSYQVLQGNDFLHL 192

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
              Y C L++GGSDQWGN+  G+DL  +++   +   TSP++T A+G K GK+   A+WL
Sbjct: 193 FDEYGCTLEIGGSDQWGNLTSGMDLIRKVRGATVNVFTSPIITDATGKKFGKSEGNAVWL 252

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIATE 305
           +  M SPY F+Q+W N  D ++    K  T LP +EI+R+A+         EA++ +A E
Sbjct: 253 DATMLSPYRFYQFWFNRPDVEMEGLLKAFTFLPKAEIERLAEESRTNPGAREAQRTLAWE 312

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKD------EVSRGMG-------- 351
           +T+ VHG    + A  A+   F        +   ++         E   G          
Sbjct: 313 VTSFVHGEAATQAAIDASAALFGRGGDLASIDEDTLEAAIDGLKIEDESGAKTFASVGID 372

Query: 352 --LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
             +    VKAG   S +EAR+ +KS  + +NN+ +++E+  +   DF       +  GKK
Sbjct: 373 DRITEAGVKAGLFKSISEARKTIKSGGVYLNNNRVTDEEQTLGQDDFLHGRFALIRRGKK 432

Query: 410 NHIICH 415
              +  
Sbjct: 433 ALGVVE 438


>gi|258509012|ref|YP_003171763.1| tyrosyl-tRNA synthetase [Lactobacillus rhamnosus GG]
 gi|257148939|emb|CAR87912.1| Tyrosyl-tRNA synthetase [Lactobacillus rhamnosus GG]
 gi|259650304|dbj|BAI42466.1| tyrosyl-tRNA synthetase [Lactobacillus rhamnosus GG]
          Length = 423

 Score =  461 bits (1188), Expect = e-128,   Method: Composition-based stats.
 Identities = 147/431 (34%), Positives = 218/431 (50%), Gaps = 24/431 (5%)

Query: 1   MPAFKSD-FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLML 59
           M   +    L  L  RG ++Q+++   L  L  +  V+ Y G D T  SLH GHL   M+
Sbjct: 1   MTETQQGQILDELKWRGALNQLTDEAGLRKLTEEKAVSVYCGTDPTGDSLHVGHLIPFMI 60

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG 119
           L   Q  GH+P+ L+GGGT  IGDPS R+  R +   + I  N +K+     +      G
Sbjct: 61  LKRFQLMGHRPVILIGGGTGSIGDPSGRNSERVLQTMETIATNKKKLTAQMENLF----G 116

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
             D  +++N  WL  I  +D LR+ G  FSVN ML+ E V SRL  E  +S+ EF Y IL
Sbjct: 117 TDDFRIVDNYDWLSKISMLDFLRDYGKLFSVNNMLNKEVVASRL--ETGISYTEFTYQIL 174

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK--LFALTSPLLTTASGTKM 237
           Q+ DF+ L K+ D +LQ+GG+DQWGNI  GIDL  R + P    + LT+PL+  A GTK 
Sbjct: 175 QSVDFLHLFKHEDVQLQIGGADQWGNITAGIDLIHRFEGPDARAYGLTNPLMLKADGTKF 234

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEI 295
           GK+  GA+WL+ E TSPY F+Q+W N DDADV  F K  T L   EI  + +      E 
Sbjct: 235 GKSAGGAVWLDPEKTSPYEFYQFWFNQDDADVEKFLKFFTFLSRDEIAELVEATKTHPEK 294

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDE 345
             A++ +A  +T  VHG++  ++A + +   F   +            +  PT+   +  
Sbjct: 295 RAAQRELARAVTKFVHGQKAVDQAESISAALFSGDVADLSADDIKKGFKQFPTVEAPQTA 354

Query: 346 VSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLS 405
            +    L+          S  +AR  +++ AI IN S   +   ++          + + 
Sbjct: 355 ENIVTWLVD---TTKIEPSRRQAREDIQNGAITINGSRQRDLDFEVDPSTHFDGQYVIVR 411

Query: 406 FGKKNHIICHL 416
            GKK + +  +
Sbjct: 412 RGKKRYFLVEI 422


>gi|297198738|ref|ZP_06916135.1| tyrosyl-tRNA synthetase [Streptomyces sviceus ATCC 29083]
 gi|197715380|gb|EDY59414.1| tyrosyl-tRNA synthetase [Streptomyces sviceus ATCC 29083]
          Length = 422

 Score =  461 bits (1188), Expect = e-128,   Method: Composition-based stats.
 Identities = 137/421 (32%), Positives = 224/421 (53%), Gaps = 11/421 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +D +  L  RG     ++   L    + G VT Y G+D TA+SLH GHL Q++ +  LQ+
Sbjct: 2   TDIVDELKWRGLWALSTDEDALRKALADGPVTFYCGFDPTAASLHVGHLVQVLTMRRLQQ 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            G +P++L+GG T  IGDP      R +   + +   + +++     F+ +  G+  A+M
Sbjct: 62  AGLRPLALVGGATGQIGDPRP-TAERTLNDPETVANWVTRLRAQIEPFLSF-EGENAAVM 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  W   +  I+ LR+IG  F VN+ML+ +SV  RL+ ++ +S+ EF+Y +LQ  DF+
Sbjct: 120 VNNLDWTAGMSAIEFLRDIGKHFRVNKMLTKDSVARRLESQEGISYTEFSYQLLQGMDFL 179

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASGTKMGKTLSGA 244
           EL + Y C LQ GGSDQWGN+  G+DL  RL+    +  L +PL+  A GTK GKT  GA
Sbjct: 180 ELYRRYGCTLQQGGSDQWGNLTAGLDLIHRLEPDASVHCLATPLMVKADGTKFGKTEGGA 239

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKII 302
           +WL+ EMT+PY F+Q+W N+DD D+ ++ + L+     E++ + K   +      A++ +
Sbjct: 240 VWLDPEMTTPYAFYQFWLNVDDRDISTYMRILSFRSREELEELEKQTEERPQARAAQRAL 299

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQ------HMPTISISKDEVSRGMGLLTLI 356
           A E+TT+VHG ++      A+   F     ++            +   +V+    ++ L 
Sbjct: 300 AEELTTLVHGADQTAAVIAASRALFGQGELAELDERTLTAALSEVPHIQVAELGAVVDLF 359

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            + G   S + ARR +K     +NN  ++ E      +D      + L  GKKN     +
Sbjct: 360 AEVGLVASKSAARRTVKEGGAYVNNVKVAAEDAVPAKEDLLHGRWLVLRRGKKNLAAVEV 419

Query: 417 C 417
            
Sbjct: 420 T 420


>gi|300779179|ref|ZP_07089037.1| tyrosine--tRNA ligase [Chryseobacterium gleum ATCC 35910]
 gi|300504689|gb|EFK35829.1| tyrosine--tRNA ligase [Chryseobacterium gleum ATCC 35910]
          Length = 431

 Score =  461 bits (1188), Expect = e-128,   Method: Composition-based stats.
 Identities = 155/433 (35%), Positives = 233/433 (53%), Gaps = 26/433 (6%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           + F+  L  RG    +      D   ++ V TAYIG+D TA SLH G L Q+ +L   Q+
Sbjct: 2   NSFIEELKWRGLFADMMPGT--DEQLNKEVTTAYIGFDPTADSLHIGSLIQIKILAHFQQ 59

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY-GTGKTDAL 124
            GHKPI+L+GG T +IGDPS +   R ++  + +   ++ +K   S F+ + G     A 
Sbjct: 60  HGHKPIALVGGATGMIGDPSGKSAERNLLDEETLLHYVDCLKNQLSKFLNFEGNEPNKAE 119

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE---QSLSFLEFNYMILQA 181
           ++NN  W+ +I ++D  + IG   +VN M++ +SV+ R   E     +SF EF Y ++Q 
Sbjct: 120 LVNNYDWMKNISFLDFAKNIGKNITVNYMMAKDSVKKRFSGEGGADGMSFTEFTYQLIQG 179

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
           YDF+ L +N + +LQMGGSDQWGNI  G +L  R    + FALT PL+T A G+K GK+ 
Sbjct: 180 YDFLHLYQNNNVKLQMGGSDQWGNITTGTELIRRKAQGEAFALTVPLITKADGSKFGKSE 239

Query: 242 SG-AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--A 298
           SG   WL+K+ TSPY F+Q+W N  D D   F K  T L   EI+ + +      +E   
Sbjct: 240 SGENYWLDKKKTSPYKFYQFWLNATDEDAERFIKFYTFLGKEEIEALIEEHKTAPHERKL 299

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKD 344
           +K +A E+T  VHGREE EKA  A+   F  S                   +P   I+K 
Sbjct: 300 QKKLAEEVTVWVHGREEYEKALKASEILFGRSTAEDLVSLDEETFLEVFDGVPQKEIAKA 359

Query: 345 EVSRGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
           +V  G+ ++ L+ + +GF  S +EA+R +K NAI +N   +++        D      + 
Sbjct: 360 DV-LGVNIVDLLSEKSGFLKSKSEAQREIKGNAISVNKQKVND-TFTANETDLIDGKFLL 417

Query: 404 LSFGKKNHIICHL 416
           L  GKK++ I  +
Sbjct: 418 LQKGKKSYFIVKV 430


>gi|281421500|ref|ZP_06252499.1| tyrosine--tRNA ligase [Prevotella copri DSM 18205]
 gi|281404572|gb|EFB35252.1| tyrosine--tRNA ligase [Prevotella copri DSM 18205]
          Length = 433

 Score =  461 bits (1188), Expect = e-128,   Method: Composition-based stats.
 Identities = 142/434 (32%), Positives = 221/434 (50%), Gaps = 27/434 (6%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
            +F+  L  RG + QI    E     +  +V+AY+G D TA SLH GHL  +M+L  LQ+
Sbjct: 3   KNFVEELKWRGMLAQIMPGTE--EYLNTHMVSAYLGTDPTADSLHIGHLCGIMMLRHLQR 60

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG-TGKTDAL 124
            GHKP  L+GG T +IGDPS + + R ++ S+ +  N E IK   S F+ +       A 
Sbjct: 61  CGHKPYLLVGGATGMIGDPSGKSQERNLLDSETLYHNQEAIKKQVSKFLDFDGNEPNKAE 120

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQAY 182
           ++NN  W+    ++D  R +G   +VN M++ +SV+ RL  E    LSF EF Y +LQ Y
Sbjct: 121 LVNNYDWMKDFTFLDFARVVGKHITVNYMMAKDSVQKRLNGEARDGLSFTEFTYQLLQGY 180

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL--KTPKLFALTSPLLTTASGTKMGKT 240
           DF+   + Y  RLQ+GG+DQWGN+  G +L  R      + F LT PL+T A G K GKT
Sbjct: 181 DFLYQYEKYGVRLQLGGNDQWGNMTTGTELIHRTLGNDAECFCLTCPLITKADGKKFGKT 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEA 298
            SG IWL++  T+PY F+Q+W N+ D D   + K  T L    ID + +   ++      
Sbjct: 241 ESGNIWLDRNRTTPYAFYQFWLNVSDDDAEKYIKIFTDLDKETIDALVEEHKQDPGRRVL 300

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKD 344
           +K +A E+T MVH +E+ + A  A+   F  +                  ++P   + K+
Sbjct: 301 QKRLAEEVTIMVHSQEDLDMAIAASNILFGKATKENLAQLDEATLNDVFANVPHYDLDKN 360

Query: 345 EVSRGMGLLTLIVKAG--FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNI 402
            +  G   + L  + G     S +E R+ +K   + +N   ++     +   D      +
Sbjct: 361 LL--GGTAVDLFNQEGMQIFPSKSEMRKLVKGGGVSLNKEKLAAFDQVVTADDLIDGKYL 418

Query: 403 KLSFGKKNHIICHL 416
            +  GKKN+ +  +
Sbjct: 419 LVQKGKKNYFLITV 432


>gi|229553183|ref|ZP_04441908.1| tyrosine--tRNA ligase [Lactobacillus rhamnosus LMS2-1]
 gi|229313479|gb|EEN79452.1| tyrosine--tRNA ligase [Lactobacillus rhamnosus LMS2-1]
          Length = 429

 Score =  461 bits (1188), Expect = e-128,   Method: Composition-based stats.
 Identities = 147/431 (34%), Positives = 219/431 (50%), Gaps = 24/431 (5%)

Query: 1   MPAFKSD-FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLML 59
           M   +    L  L  RG ++Q+++   L  L  +  V+ Y G D T  SLH GHL   M+
Sbjct: 7   MTETQRGQILDELKWRGALNQLTDEAGLRKLTEEKAVSVYCGTDPTGDSLHVGHLIPFMI 66

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG 119
           L   Q  GH+P+ L+GGGT  IGDPS R+  R +   + I  N +K+     +      G
Sbjct: 67  LKRFQLMGHRPVILIGGGTGSIGDPSGRNSERVLQTMETIATNKKKLTAQMENLF----G 122

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
             D  +++N  WL  I  +D LR+ G  FSVN ML+ E V SRL  E  +S+ EF Y IL
Sbjct: 123 TDDFRIVDNYDWLSKISMLDFLRDYGKLFSVNNMLNKEVVASRL--ETGISYTEFTYQIL 180

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK--LFALTSPLLTTASGTKM 237
           Q+ DF+ L K+ D +LQ+GG+DQWGNI  GIDL  RL+ P    + LT+PL+  A GTK 
Sbjct: 181 QSVDFLHLFKHEDVQLQIGGADQWGNITAGIDLIHRLEGPDARAYGLTNPLMLKADGTKF 240

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEI 295
           GK+  GA+WL+ E TSPY F+Q+W N DDADV  F K  T L   EI  + +      E 
Sbjct: 241 GKSAGGAVWLDPEKTSPYEFYQFWFNQDDADVEKFLKFFTFLSRDEIAELVEATKTHPEK 300

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDE 345
             A++ +A  +T  VHG++  ++A + +   F   +            +  PT+   +  
Sbjct: 301 RAAQRELARAVTKFVHGQKAVDQAESISAALFSGDVADLSADDIKQGFKQFPTVEAPQTA 360

Query: 346 VSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLS 405
            +    L+          S  +AR  +++ AI IN +   +   ++          + + 
Sbjct: 361 ENIVTWLVD---TTKIEPSRRQAREDIQNGAITINGTRQRDLDFEVDPSTHFDGQYVIVR 417

Query: 406 FGKKNHIICHL 416
            GKK + +  +
Sbjct: 418 RGKKRYFLVKI 428


>gi|57238792|ref|YP_179928.1| tyrosyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
 gi|58578717|ref|YP_196929.1| tyrosyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
 gi|81353090|sp|Q5HCB5|SYY_EHRRW RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|57160871|emb|CAH57773.1| tyrosyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
 gi|58417343|emb|CAI26547.1| Tyrosyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
          Length = 418

 Score =  461 bits (1187), Expect = e-128,   Method: Composition-based stats.
 Identities = 208/413 (50%), Positives = 285/413 (69%), Gaps = 1/413 (0%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
            KSDFL +L  RG+ +Q ++  ELD L S+  V AYIG+D TA SLH G L Q+M+L +L
Sbjct: 3   LKSDFLGLLYSRGYFNQCTDLAELDQLMSKECVIAYIGFDCTARSLHIGSLMQIMILRYL 62

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           QK GHKPI L+G GT+ IGDPS +D+SR ++ S +IQEN   I+ +   FI  G G +DA
Sbjct: 63  QKCGHKPIVLLGNGTTKIGDPSGKDKSRTLLSSSDIQENTLGIRKVLEKFIVCGGGVSDA 122

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           L++ N  WL  + YID LR IG  FSVN ML+F+SV+ RL+REQ+LSFLEFNYM+LQAYD
Sbjct: 123 LLVYNAEWLDKLNYIDFLRNIGRHFSVNNMLTFDSVKLRLEREQNLSFLEFNYMLLQAYD 182

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+EL + Y+C LQ+GGSDQWGNI+ G++LG +LK P+LF LT+ LL T++G KMGKT  G
Sbjct: 183 FIELNQRYNCLLQIGGSDQWGNIVNGVELGRKLKLPQLFGLTTHLLLTSTGEKMGKTADG 242

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIA 303
           AIWL+ EM SP ++WQY+RN+ D DV  F +  T LP++EI+++  L+G EINEAKKI+A
Sbjct: 243 AIWLDGEMYSPADYWQYFRNVKDEDVGRFLRLFTELPLTEIEKLENLKGYEINEAKKILA 302

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
           TE T + HG + A+  A  A++ F+ + HS  +P   + K E+  G+ ++ L+  +G   
Sbjct: 303 TEATRICHGEKIAQDIAYDALKVFECNDHS-GLPVFYVCKSEIELGLSVVKLLQVSGMEK 361

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           S + A+R +     KIN+ II +   ++ LQDF     IKLS GKK H+   L
Sbjct: 362 SNSSAKRLINDKGCKINDIIILDVNYKLSLQDFCGMSYIKLSCGKKRHLKVVL 414


>gi|326692325|ref|ZP_08229330.1| tyrosyl-tRNA synthetase [Leuconostoc argentinum KCTC 3773]
          Length = 415

 Score =  461 bits (1187), Expect = e-128,   Method: Composition-based stats.
 Identities = 141/420 (33%), Positives = 214/420 (50%), Gaps = 17/420 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG ++Q+++   L    + G + AY+G D TA SLH GHL   M+L   Q  
Sbjct: 2   NFIEDLKWRGALNQVTDEEGLLEAMADGKIGAYVGTDPTADSLHLGHLIPFMVLKRFQNA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           G K + ++GG T  IGDP      R+++  +++ EN + I    +       G  D  ++
Sbjct: 62  GGKAVIIVGGATGAIGDPRP-TTERQLLTPEQLAENEKGITAQVTKLF----GDDDTRIV 116

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  +   D LR+ G  FS+N ML  + V SRL  E  +SF EF Y +LQ  DF E
Sbjct: 117 NNNDWLGKLTLTDFLRDYGKLFSINVMLKKDVVASRL--ETGISFTEFTYQVLQGIDFHE 174

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKLFALTSPLLTTASGTKMGKTLSGA 244
           L +  D +LQ+GGSDQWGNI  GIDL   L+    K F LT PL+T ++G K GK+   A
Sbjct: 175 LWRREDVKLQIGGSDQWGNITSGIDLIHSLEGNDAKAFGLTIPLMTDSTGKKFGKSEGNA 234

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKII 302
           IWL+ + TSPY F+Q+W N  DADVV + K  T L + EI+ +AK          A++ +
Sbjct: 235 IWLDPKKTSPYTFYQFWLNQSDADVVKYLKYFTFLSVDEIETLAKAVETSPGDRLAQRRL 294

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI-----SISKDEVSRGM-GLLTLI 356
           A E+T  VHG+   E A   +   F   + +     I      +   +    +  ++  +
Sbjct: 295 AQEVTKFVHGQAAVEDAEKLSAALFSGDVATLSAAQIGDAFGGVPSFDTPNEIKNVVDFL 354

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V  G   S  +AR  + + AI IN   +++   ++          + +  GKK + +  +
Sbjct: 355 VDGGVEPSKRQAREDVTNGAITINGEKVTDVAAEVDPSTHYDGQFVLVRRGKKKYFLGKV 414


>gi|23465618|ref|NP_696221.1| tyrosyl-tRNA synthetase [Bifidobacterium longum NCC2705]
 gi|81753963|sp|Q8G5G1|SYY_BIFLO RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|23326289|gb|AAN24857.1| tyrosyl-tRNA synthetase [Bifidobacterium longum NCC2705]
          Length = 440

 Score =  461 bits (1187), Expect = e-127,   Method: Composition-based stats.
 Identities = 140/420 (33%), Positives = 215/420 (51%), Gaps = 20/420 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L  RG I Q ++   L    +   +T Y G+D TA+SLH G+L QL+ +  LQ  G
Sbjct: 15  LLEELEWRGLISQSTDRDRLAEALNGEPITYYCGFDPTAASLHIGNLVQLINMRHLQLAG 74

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H PI+L+GG T +IGDP    E R +     +    +++K      +    G      ++
Sbjct: 75  HHPIALVGGATGLIGDPRQSGE-RTLNPKDVVAGWADRLKNQIGGILD-TEGANAVRFVS 132

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W  S+  ID LR++G  F +  ML+ ++V  RL  E+ +SF EF+Y +LQ  DF+ L
Sbjct: 133 NYDWTASMTVIDFLRDVGKNFRLGTMLAKDTVARRLNSEEGISFTEFSYQVLQGNDFLHL 192

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
              Y C L++GGSDQWGN+  G+DL  +++   +   TSP++T ASG K GK+   A+WL
Sbjct: 193 FDEYHCTLELGGSDQWGNLTSGLDLIHKVRGVDVNVFTSPIITDASGKKFGKSEGNAVWL 252

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIATE 305
           +  M SPY F+Q+W N  D ++ S  K  T LP +EI+R+ +         EA+K +A E
Sbjct: 253 DATMLSPYKFYQFWINRPDVEMESLLKAFTFLPKAEIERLVEESKTNPGKREAQKTLAWE 312

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISK--------DEVSR--------G 349
           +T+ VHG    + A  A+   F    + + +    +          DE           G
Sbjct: 313 VTSFVHGEAATQAAIDASGALFGRGGNLEDIDEEMLESVLDGFKVVDENGEHVFPVSKPG 372

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
             ++     AG   S +EARR +KS  + +NN+ I +E+  +   DF +     +  GKK
Sbjct: 373 DRVIDAAQAAGLFKSASEARRAIKSGGVYLNNNRIEDEEQVLAEADFLAGRFALIRRGKK 432


>gi|327312729|ref|YP_004328166.1| tyrosine--tRNA ligase [Prevotella denticola F0289]
 gi|326944614|gb|AEA20499.1| tyrosine--tRNA ligase [Prevotella denticola F0289]
          Length = 432

 Score =  461 bits (1187), Expect = e-127,   Method: Composition-based stats.
 Identities = 141/432 (32%), Positives = 225/432 (52%), Gaps = 27/432 (6%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
            +F+  L  RG + QI    E   L  + +V+AY+G D TA SLH GHL  +M+L  LQ+
Sbjct: 2   KNFVEELRWRGMLAQIMPGTE--ELLQKEMVSAYLGTDPTADSLHIGHLCGIMMLRHLQR 59

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG-TGKTDAL 124
            GHKP  L+GG T +IGDPS + + R ++ ++ +  N E IK   S F+ +  +    A 
Sbjct: 60  CGHKPYLLVGGATGMIGDPSGKSQERNLLDAETLYHNQEAIKKQVSKFLDFDGSEPNKAE 119

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQAY 182
           M+NN  W+    ++D  R +G   +VN M++ +SV+ RL  E    LSF EF Y +LQ Y
Sbjct: 120 MVNNYDWMKDFTFLDFARVVGKHITVNYMMAKDSVQKRLNGEARDGLSFTEFTYQLLQGY 179

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKLFALTSPLLTTASGTKMGKT 240
           DF+   + +  +LQ+GG+DQWGN+  G +L  R      + + LT PL+T A G K GKT
Sbjct: 180 DFLYQYEKFGVKLQLGGNDQWGNMTTGTELIRRTLGSEAEAYCLTCPLITKADGKKFGKT 239

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEA 298
            SG IWL++  T+PY F+Q+W N+ D D   + K  T+L    ID + +   ++      
Sbjct: 240 ESGNIWLDRNRTTPYAFYQFWLNVSDEDAEKYIKIFTSLEKDVIDALIEEHRQDPGRRTL 299

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKD 344
           ++ +A E+T MVH +++ + A  A+   F  S                 + +P   +SKD
Sbjct: 300 QRRLAEEVTRMVHSQDDLDMAIAASNILFGKSTKENLLQLDEQTFADVFKDVPHYEVSKD 359

Query: 345 EVSRGMGLLTLIVKAG--FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNI 402
            +  G   + +  + G     S +E R+ +KS  + +N   ++     +   D      +
Sbjct: 360 IL--GQPAVEVFNQEGMQIFPSKSEMRKLVKSGGVSLNKEKLAAFDQPVTADDLIDGKYL 417

Query: 403 KLSFGKKNHIIC 414
            +  GKKN+ + 
Sbjct: 418 LVQKGKKNYSLI 429


>gi|260593358|ref|ZP_05858816.1| tyrosine--tRNA ligase [Prevotella veroralis F0319]
 gi|260534634|gb|EEX17251.1| tyrosine--tRNA ligase [Prevotella veroralis F0319]
          Length = 432

 Score =  461 bits (1187), Expect = e-127,   Method: Composition-based stats.
 Identities = 141/432 (32%), Positives = 225/432 (52%), Gaps = 27/432 (6%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
            +F+  L  RG + QI    E   L  + +V+AY+G D TA SLH GHL  +M+L  LQ+
Sbjct: 2   KNFVEELRWRGMLAQIMPGTE--ELLQKEMVSAYLGTDPTADSLHIGHLCGIMMLRHLQR 59

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK-TDAL 124
            GHKP  L+GG T +IGDPS + + R ++ ++ +  N E IK   S F+ +   +   A 
Sbjct: 60  CGHKPYLLVGGATGMIGDPSGKSQERNLLDAETLYHNQEAIKKQVSKFLDFDGNEANKAE 119

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQAY 182
           M+NN  W+    ++D  R +G   +VN M++ +SV+ RL  E    LSF EF Y +LQ Y
Sbjct: 120 MVNNYDWMKDFTFLDFARVVGKHITVNYMMAKDSVQKRLNGEARDGLSFTEFTYQLLQGY 179

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKLFALTSPLLTTASGTKMGKT 240
           DF+   + +  +LQ+GG+DQWGN+  G +L  R      + + LT PL+T A G K GKT
Sbjct: 180 DFLYQYEKFGVKLQLGGNDQWGNMTTGTELIRRTLGSEAEAYCLTCPLITKADGKKFGKT 239

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEA 298
            SG IWL++  T+PY F+Q+W N+ D D   + K  T+L    ID + +   ++      
Sbjct: 240 ESGNIWLDRNRTTPYAFYQFWLNVSDDDAEKYIKIFTSLEKDVIDGLIEEHRQDPGRRTL 299

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKD 344
           ++ +A E+T MVH +E+ + A  A+   F  S                 + +P   +SKD
Sbjct: 300 QRRLAEEVTRMVHSQEDLDMAIAASNILFGKSTKENLLQLDEQTFADVFKDVPHYEVSKD 359

Query: 345 EVSRGMGLLTLIVKAG--FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNI 402
            +  G   + +  + G     S +E R+ +K   + +N   ++     +  +D      +
Sbjct: 360 VL--GQPAVDVFNQEGMQIFPSKSEMRKLVKGGGVSLNKEKLAAFDQPVTAEDLIDGKYL 417

Query: 403 KLSFGKKNHIIC 414
            +  GKKN+ + 
Sbjct: 418 LVQKGKKNYSLI 429


>gi|282859934|ref|ZP_06269022.1| tyrosine--tRNA ligase [Prevotella bivia JCVIHMP010]
 gi|282587337|gb|EFB92554.1| tyrosine--tRNA ligase [Prevotella bivia JCVIHMP010]
          Length = 432

 Score =  461 bits (1186), Expect = e-127,   Method: Composition-based stats.
 Identities = 141/432 (32%), Positives = 225/432 (52%), Gaps = 27/432 (6%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
            +F+  L  RG + Q+    E      + +V+AY+G D TA SLH GHL  +M+L  LQ+
Sbjct: 2   KNFVEELRWRGMLAQMMPGTE--EFLMKEMVSAYLGTDPTADSLHIGHLCGIMMLRHLQR 59

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG-TGKTDAL 124
            GHKP  L+GG T +IGDPS + + R ++ ++ +  N E IK   S F+ +  T    A 
Sbjct: 60  CGHKPYLLVGGATGMIGDPSGKSQERNLLDTETLYHNQEAIKKQVSKFLDFDSTEPNKAE 119

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQAY 182
           M+NN  W+    ++D  R +G   +VN M++ +SV+ RL  E    LSF EF Y +LQ Y
Sbjct: 120 MVNNYDWMKDFTFLDFARTVGKHITVNYMMAKDSVKRRLNGEASDGLSFTEFTYQLLQGY 179

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKLFALTSPLLTTASGTKMGKT 240
           DF+   ++Y+ +LQ+GG+DQWGN+  G +L  R      + + LT PL+T A G K GKT
Sbjct: 180 DFLYQYQHYNIKLQLGGNDQWGNMTTGSELIRRTLGSEAEAYCLTCPLITKADGKKFGKT 239

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEA 298
            SG IWL++  TSPY F+Q+W N+ D D   + K  T+L    I+ +     ++      
Sbjct: 240 ESGNIWLDRNRTSPYAFYQFWLNVSDDDAAKYIKIFTSLDRPTIEGLIAEHSEDPGRRTL 299

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKD 344
           ++ +A E+T MVH +E+ + A  A+   F  S                 + +P   +SK+
Sbjct: 300 QRRLAEEVTRMVHSQEDLDMAIAASNILFGKSTKENLLQLDEQTFNDVFKDVPHFEVSKE 359

Query: 345 EVSRGMGLLTLIVKAG--FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNI 402
            +  G   + ++ + G     S +E R+ +K   + +N   ++     I   D      +
Sbjct: 360 LL--GQPAVEIMNQEGMTIFPSKSEMRKLVKGGGVSLNKEKLAAFDQVITADDLIDGKYL 417

Query: 403 KLSFGKKNHIIC 414
            +  GKKN+ + 
Sbjct: 418 LVQKGKKNYFLI 429


>gi|325860199|ref|ZP_08173324.1| tyrosine--tRNA ligase [Prevotella denticola CRIS 18C-A]
 gi|325482286|gb|EGC85294.1| tyrosine--tRNA ligase [Prevotella denticola CRIS 18C-A]
          Length = 432

 Score =  461 bits (1186), Expect = e-127,   Method: Composition-based stats.
 Identities = 140/432 (32%), Positives = 224/432 (51%), Gaps = 27/432 (6%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
            +F+  L  RG + QI    E   L  + +V+AY+G D TA SLH GHL  +M+L  LQ+
Sbjct: 2   KNFVEELRWRGMLAQIMPGTE--ELLQKEMVSAYLGTDPTADSLHIGHLCGIMMLRHLQR 59

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG-TGKTDAL 124
            GHKP  L+GG T +IGDPS + + R ++ ++ +  N E IK   S F+ +  +    A 
Sbjct: 60  CGHKPYLLVGGATGMIGDPSGKSQERNLLDAETLYHNQEAIKKQVSKFLDFDGSEPNKAE 119

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQAY 182
           M+NN  W+    ++D  R +G   +VN M++ +SV+ RL  E    LSF EF Y +LQ Y
Sbjct: 120 MVNNYDWMKDFTFLDFARVVGKHITVNYMMAKDSVQKRLNGEARDGLSFTEFTYQLLQGY 179

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKLFALTSPLLTTASGTKMGKT 240
           DF+   + +  +LQ+GG+DQWGN+  G +L  R      + + LT PL+T A G K GKT
Sbjct: 180 DFLYQYEKFGVKLQLGGNDQWGNMTTGTELIRRTLGSEAEAYCLTCPLITKADGKKFGKT 239

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEA 298
            SG IWL++  T+PY F+Q+W N+ D D   + K  T+L    ID + +   ++      
Sbjct: 240 ESGNIWLDRNRTTPYAFYQFWLNVSDEDAEKYIKIFTSLEKDIIDALIEEHRQDPGRRTL 299

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKD 344
           ++ +A E+T MVH +++ + A  A+   F  S                 + +P   +SKD
Sbjct: 300 QRRLAEEVTRMVHSQDDLDMAIAASNILFGKSTKENLLQLDEQTFADVFKDVPHYEVSKD 359

Query: 345 EVSRGMGLLTLIVKAG--FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNI 402
            +  G   + +  + G     S +E R+ +K   + +N   ++     +   D      +
Sbjct: 360 IL--GQPAVEVFNQEGMQIFPSKSEMRKLVKGGGVSLNKEKLAAFDQPVTADDLIDGKYL 417

Query: 403 KLSFGKKNHIIC 414
            +  GKKN+ + 
Sbjct: 418 LVQKGKKNYSLI 429


>gi|254291176|ref|ZP_04961972.1| tyrosyl-tRNA synthetase [Vibrio cholerae AM-19226]
 gi|150422870|gb|EDN14821.1| tyrosyl-tRNA synthetase [Vibrio cholerae AM-19226]
          Length = 434

 Score =  461 bits (1186), Expect = e-127,   Method: Composition-based stats.
 Identities = 152/421 (36%), Positives = 223/421 (52%), Gaps = 13/421 (3%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L +RG I Q +    L    +      Y G+D TA SLH GHL  L++L   Q  G
Sbjct: 14  LFDDLQQRGLIAQSTPLEALVERFAT-PQVLYCGFDPTAGSLHIGHLVPLLMLKRFQNAG 72

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM-L 126
           H+ I+L+GG T +IGDPSF+   R +  +Q +Q+ +  +    +  +   +    +LM +
Sbjct: 73  HQAIALIGGATGMIGDPSFKANERVLNSAQTVQQWVSDLSQQITQLMTSQSENCASLMTV 132

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDFV 185
           NN  W+  I  ID  R++G  FSVN M++ ESV+ RL R +Q +SF EF+Y +LQ+YDF 
Sbjct: 133 NNADWIGKINLIDFFRDVGKHFSVNAMINRESVKQRLARPDQGISFTEFSYSLLQSYDFA 192

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L + + C LQ+GG+DQWGNI+ GIDL  RL   ++  LT PL+T + GTK GKT SGA+
Sbjct: 193 HLNREFGCALQIGGNDQWGNIVSGIDLTRRLNGTEVCGLTLPLITKSDGTKFGKTESGAV 252

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKKIIA 303
           WL    TSPY F+Q+W N DDADV  F    T L  +EI+ + +         +A++I+A
Sbjct: 253 WLESSKTSPYRFYQFWLNSDDADVYRFLAYYTFLSTAEIEEIRQADTLRAGKPQAQQILA 312

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRGMGLLTLIV 357
             +T  VHG E    A       F   +    +  ++      +     SR   LL  ++
Sbjct: 313 EHVTRFVHGEEGLAAAQRITQALFSGDVSYLSLSELAQLELDGLPCVAASRTDSLLDFLL 372

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            +G A+S  +AR  L++ AI++N   +  E +      FD      L  GKK   +  L 
Sbjct: 373 SSGLASSKRQAREWLENGAIRVNGERVQQEGMLSGFALFD--RYYVLQRGKKQFALIKLE 430

Query: 418 G 418
           G
Sbjct: 431 G 431


>gi|310287607|ref|YP_003938865.1| Tyrosyl-tRNA synthetase [Bifidobacterium bifidum S17]
 gi|309251543|gb|ADO53291.1| Tyrosyl-tRNA synthetase [Bifidobacterium bifidum S17]
          Length = 440

 Score =  461 bits (1186), Expect = e-127,   Method: Composition-based stats.
 Identities = 138/426 (32%), Positives = 217/426 (50%), Gaps = 20/426 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L  RG I Q ++ ++L    +   VT Y G+D TA+SLH G+L QL+ +  LQ  G
Sbjct: 15  VLEELEWRGLISQSTDRKQLAEALNGEPVTYYCGFDPTAASLHIGNLVQLINMRHLQAAG 74

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H PI+L+GG T +IGDP    E R +     +    E++K      ++   G      ++
Sbjct: 75  HHPIALVGGATGLIGDPRQSGE-RTLNPKDVVAGWAERLKRQIGGILE-TYGDNPVRFVS 132

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W   +  ID LR++G  F +  ML+ ++V  RL  E+ +SF EF+Y +LQ  DF+ L
Sbjct: 133 NYDWTAQMSVIDFLRDVGKNFRLGTMLAKDTVARRLNSEEGISFTEFSYQVLQGNDFLHL 192

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
              Y C L++GGSDQWGN+  G+DL  +++   +   TSP++T A+G K GK+   A+WL
Sbjct: 193 FDEYGCTLEIGGSDQWGNLTSGMDLIRKVRGVTVNVFTSPIITDATGKKFGKSEGNAVWL 252

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIATE 305
           +  M SPY F+Q+W N  D ++    K  T LP +EI+R+A+         EA++ +A E
Sbjct: 253 DATMLSPYRFYQFWFNRPDVEMEGLLKAFTFLPKAEIERLAEESRTNPGAREAQRTLAWE 312

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKD------EVSRGMG-------- 351
           +T+ VHG    + A  A+   F        +   ++         E   G          
Sbjct: 313 VTSFVHGEAATQAAIDASAALFGRGGDLASIDEDTLEAAIDGLKIEDESGAKTFASVGID 372

Query: 352 --LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
             +    VKAG   S +EAR+ +KS  + +NN+ +++E+  +   DF       +  GKK
Sbjct: 373 DRITEAGVKAGLFKSISEARKTIKSGGVYLNNNRVTDEEQTLGQDDFLHGRFALIRRGKK 432

Query: 410 NHIICH 415
              +  
Sbjct: 433 ALGVVE 438


>gi|156977732|ref|YP_001448638.1| tyrosyl-tRNA synthetase [Vibrio harveyi ATCC BAA-1116]
 gi|156529326|gb|ABU74411.1| hypothetical protein VIBHAR_06520 [Vibrio harveyi ATCC BAA-1116]
          Length = 418

 Score =  460 bits (1185), Expect = e-127,   Method: Composition-based stats.
 Identities = 150/420 (35%), Positives = 224/420 (53%), Gaps = 13/420 (3%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            +  L  RG + Q S+  ++  L S+   T Y G+D TA SLH GHL  L++L   Q  G
Sbjct: 3   LIEDLQARGLVAQASDLDQVQQLLSE-PQTLYCGFDPTAGSLHIGHLVPLIMLKRFQDAG 61

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+ I+L+GG T +IGDPSF+   R +   + +   ++ +       +     K    M+N
Sbjct: 62  HQAIALIGGATGMIGDPSFKATERSLNSEETVTGWVQDLSNQIQQLMNNQVSKPMI-MVN 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDFVE 186
           N  W+  I  ID  R++G  FSVN M+S ESV+ RL+R +Q +SF EF+Y +LQ+YDF E
Sbjct: 121 NADWVKQINVIDFFRDVGKHFSVNTMISRESVKQRLQRPDQGISFTEFSYALLQSYDFAE 180

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + Y CRLQ+GG+DQWGN + GIDL  R    ++F LT PL+T + GTK GKT  GA+W
Sbjct: 181 LNRQYGCRLQIGGNDQWGNSVSGIDLTRRQNGEQVFGLTLPLITKSDGTKFGKTEGGAVW 240

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIAT 304
           L+   TSPY F+Q+W + +DADV  F +  T L   EI  +     + K   +A++I+A 
Sbjct: 241 LDPSKTSPYAFYQFWLSAEDADVYHFLRYYTFLSCDEIAAIEAQDKESKGKPQAQRILAE 300

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI-SISKDEV----SRGMGLLTLIVKA 359
           ++T  VHG E    A       F  ++    +  +  +  D +    S    L+ L+V++
Sbjct: 301 QMTRFVHGEEGLASAERITQALFSGNVQQLSLSELKQLELDGLPSMQSAEQDLVELLVES 360

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC-HLCG 418
           G A S   AR  + +NAI ++   +        L          L  GKK+  +   + G
Sbjct: 361 GLANSKRIARELIGNNAISVSGEKVD--AQTPSLNFPLFDQYWLLQRGKKHFYLVKRIAG 418


>gi|291517156|emb|CBK70772.1| tyrosyl-tRNA synthetase [Bifidobacterium longum subsp. longum F8]
          Length = 440

 Score =  460 bits (1185), Expect = e-127,   Method: Composition-based stats.
 Identities = 140/420 (33%), Positives = 215/420 (51%), Gaps = 20/420 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L  RG I Q ++   L    +   +T Y G+D TA+SLH G+L QL+ +  LQ  G
Sbjct: 15  LLEELEWRGLISQSTDRDRLAEALNGEPITYYCGFDPTAASLHIGNLVQLINMRHLQLAG 74

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H PI+L+GG T +IGDP    E R +     +    +++K      +    G      ++
Sbjct: 75  HHPIALVGGATGLIGDPRQSGE-RTLNPKDVVAGWADRLKNQIGGILD-TEGANAVRFVS 132

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W  S+  ID LR++G  F +  ML+ ++V  RL  E+ +SF EF+Y +LQ  DF+ L
Sbjct: 133 NYDWTASMTVIDFLRDVGKNFRLGTMLAKDTVARRLNSEEGISFTEFSYQVLQGNDFLHL 192

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
              Y C L++GGSDQWGN+  G+DL  +++   +   TSP++T ASG K GK+   A+WL
Sbjct: 193 FDEYHCTLELGGSDQWGNLTSGLDLIHKVRGVDVNVFTSPIITDASGKKFGKSEGNAVWL 252

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIATE 305
           +  M SPY F+Q+W N  D ++ S  K  T LP +EI+R+ +         EA+K +A E
Sbjct: 253 DATMLSPYKFYQFWINRPDVEMESLLKAFTFLPKAEIERLVEESKTNPGKREAQKTLAWE 312

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISK--------DEVSR--------G 349
           +T+ VHG    + A  A+   F    + + +    +          DE           G
Sbjct: 313 VTSFVHGEAATQSAIDASGALFGRGGNLEDIDEEMLESVLDGFKVVDENGEHVFPVSKPG 372

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
             ++     AG   S +EARR +KS  + +NN+ I +E+  +   DF +     +  GKK
Sbjct: 373 DRVIDAAQAAGLFKSASEARRAIKSGGVYLNNNRIEDEEQVLAEADFLAGRFALIRRGKK 432


>gi|297181532|gb|ADI17718.1| tyrosyl-tRNA synthetase [uncultured Oceanospirillales bacterium
           HF0130_25G24]
          Length = 427

 Score =  460 bits (1185), Expect = e-127,   Method: Composition-based stats.
 Identities = 150/426 (35%), Positives = 235/426 (55%), Gaps = 10/426 (2%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M     D +S L  R  I Q++   +L    + G    Y G+D TA SLH G +  L++L
Sbjct: 1   MGTKYEDIISELENRDLIAQLAGEDKLKEHIAAGKRAVYCGFDPTAESLHIGSVVPLLVL 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GHKPI+L+GG T +IGDPSF+   R++  S  ++E +E++K   S F+ +  G 
Sbjct: 61  RRFQLAGHKPIALVGGATGLIGDPSFKSAERQLNPSNVVEEWVERLKPQLSQFLDFDCGT 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMIL 179
             A+++NN  W  +   +  LR++G  FSVN M+  +SVR R++RE + +S+ EF+YM+L
Sbjct: 121 NSAVLVNNLEWTQNRDLLSFLRDVGKHFSVNSMVQKDSVRQRIEREGEGISYTEFSYMLL 180

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK 239
           Q+ DF EL K +DC +Q+GGSDQWGNI  GIDL  R+   ++F +T+PL+T A GTK GK
Sbjct: 181 QSLDFAELHKRFDCSIQVGGSDQWGNITGGIDLTRRIYQKQVFGVTTPLVTKADGTKFGK 240

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA--KLQGKEINE 297
           T  G IW++   TSPY  +Q+W N+ D DV  + +  T L + EI  +       +   E
Sbjct: 241 TEKGTIWISANKTSPYALYQFWLNVSDLDVYKYLRYFTFLSIEEIQEIELSDKSSQSKPE 300

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRG-M 350
           A+ I+A+E+T ++HG E    A   +   F   I        + +    + K   + G +
Sbjct: 301 AQSILASEVTKLLHGGEGLTAAKRISDSLFSGDISKLTRDDLKQLDLDGLPKTSFAGGQV 360

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            ++ ++V+   A S   AR  + +NAI +N S++ +  L +   +    G   L  GKK 
Sbjct: 361 DIIQVLVRTELAKSNKMAREFIGNNAISVNGSLVHSGDLILDASNALEGGYFVLRRGKKM 420

Query: 411 HIICHL 416
             +  +
Sbjct: 421 FHLVKV 426


>gi|227529733|ref|ZP_03959782.1| tyrosine--tRNA ligase [Lactobacillus vaginalis ATCC 49540]
 gi|227350334|gb|EEJ40625.1| tyrosine--tRNA ligase [Lactobacillus vaginalis ATCC 49540]
          Length = 417

 Score =  460 bits (1185), Expect = e-127,   Method: Composition-based stats.
 Identities = 146/424 (34%), Positives = 220/424 (51%), Gaps = 23/424 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG I+Q ++   L  L     +  Y G D T  SLH GHL   M+L   Q  
Sbjct: 2   NIIDELEWRGAINQTTDKEALKELTENKNIGLYCGTDPTGDSLHIGHLIPFMILKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P+ ++GGGT  IGDPS R   R +    +++ N + +            G  +  ++
Sbjct: 62  GHHPVIIIGGGTGAIGDPSGRKTERTLQTESQLEHNKKALTEQMKKLF----GTENFTIV 117

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           +N TWL +   ID LR+ G  F+VN ML+ E V SRL     +SF EF Y ILQA DF+ 
Sbjct: 118 DNYTWLKNFTMIDFLRDFGKLFNVNTMLNKEVVASRLDS--GISFTEFTYQILQAVDFLH 175

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSGA 244
           L +N   +L++GGSDQWGNI  GIDL  +++ P  K++ LT PL+  A GTK GKT  GA
Sbjct: 176 LYQNNSVQLEIGGSDQWGNITAGIDLIHKVEGPDAKVYGLTIPLMLKADGTKFGKTAGGA 235

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKII 302
           IWL+ + TSPY F+Q+W N DD DVV + K  T L   EID +A+   KE    EA++ +
Sbjct: 236 IWLDPKKTSPYEFYQFWINQDDRDVVKYLKYFTFLSKDEIDELAEKVQKEPWKREAQRRL 295

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGL 352
           A E+T  VHG E   +A       F   +            + +P++ ++ ++ +  + L
Sbjct: 296 AEEVTKFVHGEEGLAEAQRITKALFSGDVADLTTEEIEQAFKDVPSVEVANEKKNIILWL 355

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           +          S  +AR+ +++ AI IN   +++   +I          + +  GKK + 
Sbjct: 356 VD---DTKIEPSRRQARQDVENGAIHINGEKVTDVDAEIDPSSHFDGKFVIVRRGKKRYF 412

Query: 413 ICHL 416
           +  +
Sbjct: 413 LVRV 416


>gi|262191076|ref|ZP_06049283.1| tyrosyl-tRNA synthetase [Vibrio cholerae CT 5369-93]
 gi|262033052|gb|EEY51583.1| tyrosyl-tRNA synthetase [Vibrio cholerae CT 5369-93]
          Length = 426

 Score =  460 bits (1185), Expect = e-127,   Method: Composition-based stats.
 Identities = 150/421 (35%), Positives = 219/421 (52%), Gaps = 13/421 (3%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L +RG I Q +    L    +      Y G+D TA SLH GHL  L++L   Q  G
Sbjct: 6   LFDDLQQRGLIAQSTPLEALVERFAT-PQVLYCGFDPTAGSLHIGHLVPLLMLKRFQNAG 64

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM-L 126
           H+ I+L+GG T +IGDPSF+   R +  +Q +Q+ +  +    +  +   +     LM +
Sbjct: 65  HQAIALIGGATGMIGDPSFKANERVLNSAQTVQQWVSDLSQQITQLMTSQSENCALLMTV 124

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDFV 185
           NN  W+  I  ID  R++G  FSVN M++ ESV+ RL R +Q +SF EF+Y +LQ+YDF 
Sbjct: 125 NNADWIGKINLIDFFRDVGKHFSVNTMINRESVKQRLARPDQGISFTEFSYSLLQSYDFA 184

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L +   C LQ+GG+DQWGNI+ GIDL  RL   ++  LT PL+T + GTK GKT SGA+
Sbjct: 185 HLNRELGCALQIGGNDQWGNIVSGIDLTRRLNGAEVCGLTLPLITKSDGTKFGKTESGAV 244

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIA 303
           WL    TSPY F+Q+W N DDADV  F    T L  +EI+ + +         +A++I+A
Sbjct: 245 WLESSKTSPYRFYQFWLNSDDADVYRFLAYYTFLSTAEIEEIRQADALRAGKPQAQQILA 304

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRGMGLLTLIV 357
             +T  VHG E    A       F   +    +  ++      +     SR   LL  ++
Sbjct: 305 EHVTRFVHGEEGLAAAQRITQALFSGDVSYLSLSELAQLELDGLPCVAASRSDSLLDFLL 364

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            +G A+S  +AR  L++ AI++N   +  E   +            L  GKK   +  L 
Sbjct: 365 TSGLASSKRQAREWLENGAIRVNGERVQQEG--VLSGFALFDRYYVLQRGKKQFALIKLE 422

Query: 418 G 418
           G
Sbjct: 423 G 423


>gi|150024271|ref|YP_001295097.1| tyrosine--tRNA ligase [Flavobacterium psychrophilum JIP02/86]
 gi|259516999|sp|A6GW04|SYY_FLAPJ RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|149770812|emb|CAL42277.1| Tyrosine--tRNA ligase [Flavobacterium psychrophilum JIP02/86]
          Length = 431

 Score =  460 bits (1185), Expect = e-127,   Method: Composition-based stats.
 Identities = 154/432 (35%), Positives = 240/432 (55%), Gaps = 24/432 (5%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
            + +  L  RG  H +    E     ++   TAYIG+D TA SLH G + Q++LL  L+ 
Sbjct: 2   KNLVEELKWRGLFHDMMPGTE--EQLTKESTTAYIGFDPTADSLHIGSMVQIILLVHLKN 59

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKPI+L+GG T +IGDPS + + R ++    + +N+  IK + SSF+ + T   +A +
Sbjct: 60  FGHKPIALIGGATGMIGDPSGKSDERNLLDEATLNKNVAGIKAVLSSFLDFNTTNANAPI 119

Query: 126 -LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL-KREQSLSFLEFNYMILQAYD 183
            +NN  W+    +ID  R+IG   +VN M+S +SV+ RL    + +SF EF Y ++Q YD
Sbjct: 120 LVNNYDWMKDFSFIDFARDIGKRITVNYMMSKDSVKKRLGAEGEGMSFTEFTYQLIQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTL 241
           F  L KN++C LQMGGSDQWGNI  G +L  R+     K +ALT+PL+T A G+K GK+ 
Sbjct: 180 FQYLYKNHNCLLQMGGSDQWGNITTGTELVRRMGGEGAKAYALTTPLITKADGSKFGKSE 239

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAK 299
            G +WL  + TS Y F+Q+W N  D D   + K  T L  + ID + +       +   +
Sbjct: 240 GGNVWLTADKTSVYKFYQFWLNTSDDDAEKYIKIFTFLDKNTIDGLIEEHKTAPHLRVLQ 299

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDE 345
           + +  EIT +VHG+EE EKA  A+   F  S  +                +P   ISK +
Sbjct: 300 RKLTEEITILVHGKEELEKAIKASNILFGNSTSNDLKGLDAATFLEIFDGVPQAEISKTD 359

Query: 346 VSRGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           +  G+ ++ ++ + +GF  S  EARR L +N+I +N   ++ E+  +  +D  +   + L
Sbjct: 360 IEAGINIVEVLNEKSGFLKSNGEARRALSANSIAVNKEKVT-EEFTLTTKDMINNQFVLL 418

Query: 405 SFGKKNHIICHL 416
             GKKN+ + ++
Sbjct: 419 QSGKKNYFVLNV 430


>gi|284036022|ref|YP_003385952.1| tyrosyl-tRNA synthetase [Spirosoma linguale DSM 74]
 gi|283815315|gb|ADB37153.1| tyrosyl-tRNA synthetase [Spirosoma linguale DSM 74]
          Length = 433

 Score =  460 bits (1184), Expect = e-127,   Method: Composition-based stats.
 Identities = 150/437 (34%), Positives = 228/437 (52%), Gaps = 32/437 (7%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG ++ ++   E      + +  AYIG+D TA+SLH G+L  +MLL  LQ+ 
Sbjct: 2   NFIDELRWRGMLNDMTPGTE--EQLQKEMTAAYIGFDPTAASLHIGNLATIMLLVHLQRA 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP +L+GG T +IGDPS +   R  +  + +Q N   I+   + F+ +  G   A M+
Sbjct: 60  GHKPFALVGGATGMIGDPSGKAAEREFLSEETLQRNQNGIRQQLTKFLDFDCGANSAEMV 119

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I ++  LRE G   +VN M++ +SV+ RL  E  +SF EF+Y +LQ YDF  
Sbjct: 120 NNYDWFKEISFLGFLREAGKHITVNYMMAKDSVKKRL--ETGISFTEFSYQLLQGYDFYW 177

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERL--------KTPKLFALTSPLLTTASGTKMG 238
           L K+ + RLQMGGSDQWGNI  G +   R            + FALT+PL+T + GTK G
Sbjct: 178 LYKHKNVRLQMGGSDQWGNITTGTEFIRRKEGGAEHLEGGHQAFALTTPLVTKSDGTKFG 237

Query: 239 KTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEIN 296
           K+ SG +WL+  +TSPY F+Q+W N  DAD     +  T L   EI+ + +       + 
Sbjct: 238 KSESGNVWLDPALTSPYQFYQFWLNTADADCPRLIRVFTLLTREEIEELERQHNEAPHLR 297

Query: 297 EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISIS 342
             +K IA E+TT +H     E A  A+   F  +                 + +P   +S
Sbjct: 298 ILQKAIAKEVTTRIHSESGYELAVKASEVLFGKATLETLRSIQADEFDVIFEGVPLTEVS 357

Query: 343 KDEVSRGMGLLTLIVKA---GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDST 399
            +E++    +  L+  A       S  EARR +  NA+ IN + +++    +   D+   
Sbjct: 358 AEELANSKDITDLLSVASRGEVYASKGEARRAITQNAVSINKTKVTDPAAPVAF-DWLQD 416

Query: 400 GNIKLSFGKKNHIICHL 416
             I +S GKKNH++  +
Sbjct: 417 RYILISKGKKNHLLKKI 433


>gi|227551041|ref|ZP_03981090.1| tyrosine--tRNA ligase [Enterococcus faecium TX1330]
 gi|257896666|ref|ZP_05676319.1| tyrosyl-tRNA synthetase [Enterococcus faecium Com12]
 gi|227179820|gb|EEI60792.1| tyrosine--tRNA ligase [Enterococcus faecium TX1330]
 gi|257833231|gb|EEV59652.1| tyrosyl-tRNA synthetase [Enterococcus faecium Com12]
          Length = 418

 Score =  460 bits (1184), Expect = e-127,   Method: Composition-based stats.
 Identities = 150/424 (35%), Positives = 221/424 (52%), Gaps = 23/424 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L+ R  I+Q +N   L  L  +  ++ Y G D T  S+H GHL   M++   Q  
Sbjct: 2   NIIDELTWRDAINQQTNEERLRELVEEKSISLYCGVDPTGDSMHIGHLIPFMMMKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P  L+GGGT  IGDPS R   R +   +++Q N++ +        K      +   +
Sbjct: 62  GHHPYILIGGGTGTIGDPSGRKTERVLQTMEQVQHNVDALSNQMR---KLFGKDANITFV 118

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  I  ++ LR+ G  F++N ML+ + V SRL  E  +SF EF Y ILQ+ DF+ 
Sbjct: 119 NNYDWLSKISLLEFLRDYGKNFNINTMLAKDIVSSRL--EVGISFTEFTYQILQSIDFLH 176

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSGA 244
           L K YD +LQ+GG+DQWGNI  G+DL  +L+ P  + F LT PL+  A GTK GKT  GA
Sbjct: 177 LHKTYDVQLQIGGADQWGNITAGLDLIRKLEGPEAEAFGLTIPLMLKADGTKFGKTAGGA 236

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKII 302
           IWL+ + TSP+ F+Q+W N DD DVV + K  T L   EI+ +AK      E  EA++ +
Sbjct: 237 IWLDPKKTSPFEFYQFWLNQDDRDVVKYLKFFTFLSQEEIEELAKKVETEPEKREAQRRL 296

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQH----------MPTISISKDEVSRGMGL 352
           A E+T  VH  E+ ++A       F  +I   +          MP + IS    S    +
Sbjct: 297 AEEVTRFVHSEEDLKEAQKITQALFSGNIKELNAEEIAQGFGKMPNVEIS----STPENI 352

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           + L+V      S  +AR  + + AI IN   +++    I   D      + +  GKKN+ 
Sbjct: 353 VELLVSTKIEPSKRQAREDVSNGAISINGDRVTDLNFVINPSDEFDGKFVVIRKGKKNYF 412

Query: 413 ICHL 416
           +  +
Sbjct: 413 LAKV 416


>gi|258654244|ref|YP_003203400.1| tyrosyl-tRNA synthetase [Nakamurella multipartita DSM 44233]
 gi|258557469|gb|ACV80411.1| tyrosyl-tRNA synthetase [Nakamurella multipartita DSM 44233]
          Length = 450

 Score =  460 bits (1184), Expect = e-127,   Method: Composition-based stats.
 Identities = 137/418 (32%), Positives = 212/418 (50%), Gaps = 11/418 (2%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L  RG +   ++   L    + G +TAY G+D TA SLH G+L QL++L  LQ+ G
Sbjct: 21  VLDELRWRGLVALTTDEHALAQALAAGPITAYCGFDPTAPSLHFGNLVQLIVLRHLQRAG 80

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+ I L+GG T +IGDP      R +   ++  E +++I+     F+++  G   A+M+N
Sbjct: 81  HRVICLVGGSTGLIGDPRP-TAERVLKTKEQTAEWVDRIQQQVRPFLEFA-GSNPAIMVN 138

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W   +  +D LREIG  F VN ML  ++V +RL  ++ +S+ EF+Y +LQ  D++ L
Sbjct: 139 NLDWTAPMSALDFLREIGKHFRVNTMLRKDAVAARLASDEGISYTEFSYQLLQGMDYLHL 198

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            + Y C LQ GG DQWGN+  G DL  R     +  L +PL+T + G K GK+   A+WL
Sbjct: 199 FREYGCTLQTGGQDQWGNLTAGTDLIRRATGESVHLLATPLITDSHGQKFGKSEGNAVWL 258

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATE 305
           + EMTSPY F+QYW  ++DA V    +  T     EI        Q  +   A++++A +
Sbjct: 259 SPEMTSPYAFYQYWLGVEDASVGQLLRVFTDRGPDEIADLERQTAQRPQARAAQRVLAGD 318

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQ-HMPTISISKDEV------SRGMGLLTLIVK 358
           +TT+VHG    + A  A+   F     +    PT+  +  E            +  L+V 
Sbjct: 319 VTTLVHGAAATDAAIAASAALFGRGDLASVDEPTLRAALTEAGLHQVSGEVPTVAALLVA 378

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           AG   S +EARR +      +NN+ +          +      + L  GK++     L
Sbjct: 379 AGLVKSLSEARRVVAEGGASVNNARVGEADHVPVADELLHGRYLVLRRGKRSVAGIEL 436


>gi|256847600|ref|ZP_05553045.1| tyrosyl-tRNA synthetase [Lactobacillus coleohominis 101-4-CHN]
 gi|256715289|gb|EEU30265.1| tyrosyl-tRNA synthetase [Lactobacillus coleohominis 101-4-CHN]
          Length = 416

 Score =  460 bits (1183), Expect = e-127,   Method: Composition-based stats.
 Identities = 145/424 (34%), Positives = 224/424 (52%), Gaps = 23/424 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D L  L  RG I+Q ++   L  L +   ++ Y G D T  SLH GHL   ++L   Q  
Sbjct: 2   DILEDLKWRGAINQCTDLNGLRELLNSKKISLYCGTDPTGDSLHVGHLIPFIMLKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P  L+GGGT  IGDPS R   R++  + ++Q N E +            G  +  ++
Sbjct: 62  GHHPYILIGGGTGFIGDPSGRKTERQLQTATQVQHNKEALTRQMIKLF----GTENFKIV 117

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           +N  WL  I  +D LR+ G  F+VN MLS E+V SRLK    +SF EF+Y ILQ+ DF+ 
Sbjct: 118 DNYEWLSKISLLDFLRDYGKSFNVNTMLSKEAVASRLKN--GISFTEFSYQILQSVDFLY 175

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASGTKMGKTLSGAI 245
           L      +LQ+GG+DQWGN+  G+ L    K   K+F LT PL+  A GTK GK+  GA+
Sbjct: 176 LNNVDHIQLQIGGADQWGNLTNGVYLIHSKKPNEKVFGLTIPLMLKADGTKFGKSAGGAV 235

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKKIIA 303
           WL+   TSP+ F+Q+W N DD DVV + K  T L   EID +A+      +  EA++ +A
Sbjct: 236 WLDANKTSPFEFYQFWFNQDDLDVVKYLKYFTFLTHQEIDDLAEKVKLEPQKREAQRRLA 295

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLL 353
            E+T  VHG +  ++A   +   F+ +I            + +P++ I+ D V+    ++
Sbjct: 296 EEVTKFVHGEKTMKQAERISNLLFNGNIQDLSVSELKQAFKKVPSVEINLDSVN----VI 351

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
             +V+    +S  +AR  + + AI IN   +++E   +  ++      +    GK+N+ +
Sbjct: 352 DWLVQTEIESSKRQAREDVNNGAIMINGQKVNDENYIVDPKNHFEGKYVVARKGKRNYFL 411

Query: 414 CHLC 417
             + 
Sbjct: 412 AKVV 415


>gi|257888920|ref|ZP_05668573.1| tyrosyl-tRNA synthetase [Enterococcus faecium 1,141,733]
 gi|293378453|ref|ZP_06624617.1| tyrosine--tRNA ligase [Enterococcus faecium PC4.1]
 gi|257824976|gb|EEV51906.1| tyrosyl-tRNA synthetase [Enterococcus faecium 1,141,733]
 gi|292642917|gb|EFF61063.1| tyrosine--tRNA ligase [Enterococcus faecium PC4.1]
          Length = 418

 Score =  460 bits (1183), Expect = e-127,   Method: Composition-based stats.
 Identities = 150/424 (35%), Positives = 221/424 (52%), Gaps = 23/424 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L+ R  I+Q +N   L  L  +  ++ Y G D T  S+H GHL   M++   Q  
Sbjct: 2   NIIDELTWRDAINQQTNEERLRELVEEKSISLYCGVDPTGDSMHIGHLIPFMMMKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P  L+GGGT  IGDPS R   R +   +++Q N++ +        K      +   +
Sbjct: 62  GHHPYILIGGGTGTIGDPSGRKTERVLQTMEQVQHNVDALSNQMR---KLFGKDANITFV 118

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  I  ++ LR+ G  F++N ML+ + V SRL  E  +SF EF Y ILQ+ DF+ 
Sbjct: 119 NNYDWLSKISLLEFLRDYGKNFNINTMLAKDIVASRL--EVGISFTEFTYQILQSIDFLH 176

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSGA 244
           L K YD +LQ+GG+DQWGNI  G+DL  +L+ P  + F LT PL+  A GTK GKT  GA
Sbjct: 177 LHKTYDVQLQIGGADQWGNITAGLDLIRKLEGPEAEAFGLTIPLMLKADGTKFGKTAGGA 236

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKII 302
           IWL+ + TSP+ F+Q+W N DD DVV + K  T L   EI+ +AK      E  EA++ +
Sbjct: 237 IWLDPKKTSPFEFYQFWLNQDDRDVVKYLKFFTFLSQEEIEELAKKVETEPEKREAQRRL 296

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQH----------MPTISISKDEVSRGMGL 352
           A E+T  VH  E+ ++A       F  +I   +          MP + IS    S    +
Sbjct: 297 AEEVTRFVHSEEDLKEAQKITQALFSGNIKELNAEEIAQGFGKMPNVEIS----STPENI 352

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           + L+V      S  +AR  + + AI IN   +++    I   D      + +  GKKN+ 
Sbjct: 353 VELLVSTKIEPSKRQAREDVSNGAISINGDRVTDLNFVINPSDEFDGKFVVIRKGKKNYF 412

Query: 413 ICHL 416
           +  +
Sbjct: 413 LAKV 416


>gi|296110850|ref|YP_003621231.1| tyrosine--tRNA ligase [Leuconostoc kimchii IMSNU 11154]
 gi|295832381|gb|ADG40262.1| tyrosine--tRNA ligase [Leuconostoc kimchii IMSNU 11154]
          Length = 415

 Score =  459 bits (1182), Expect = e-127,   Method: Composition-based stats.
 Identities = 143/420 (34%), Positives = 217/420 (51%), Gaps = 17/420 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG ++Q+++   L    + G + AY+G D TA SLH GHL   M+L   Q  
Sbjct: 2   NFIEELKWRGALNQVTDEAGLLEAMTNGKIGAYVGTDPTADSLHLGHLIPFMVLKRFQNA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           G K + ++GG T  IGDP      R+++  +++ EN + I    +       G  D  ++
Sbjct: 62  GGKAVIIIGGATGAIGDPRP-TTERKLLTQEQLSENEKGITAQVTKLF----GDRDTRIV 116

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  +   D LR+ G  FS+N ML  + V SRL  E  +SF EF Y +LQ  DF E
Sbjct: 117 NNNDWLGKLTLTDFLRDYGKLFSINVMLKKDVVASRL--ETGISFTEFTYQVLQGIDFHE 174

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKLFALTSPLLTTASGTKMGKTLSGA 244
           L +  D +LQ+GGSDQWGNI  GIDL   L+    K F LT PL+T ++G K GK+   A
Sbjct: 175 LWRREDVQLQIGGSDQWGNITSGIDLIHSLEGNTAKAFGLTIPLMTDSTGKKFGKSEGNA 234

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKII 302
           IWL+ + TSPY F+Q+W N +DADVV + K  T L + EID +AK         +A++ +
Sbjct: 235 IWLDPKKTSPYTFYQFWLNQNDADVVKYLKYFTFLTVEEIDALAKEIDTNPGARQAQRRL 294

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRGMGLLTLI 356
           A E+T  VHG+   ++A   +   F   + +     I+       S D       ++  +
Sbjct: 295 AQEVTKFVHGQTAVDEAEQLSNALFSGDVATLSAAQIADAFGGVPSFDATPESKNVVDFL 354

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V  G   S  +AR  + + AI IN   +++   ++          + +  GKK + +  +
Sbjct: 355 VDGGVEQSKRQAREDVTNGAITINGVKVTDVTTEVTPATHYDGKFVLVRRGKKKYFLGKV 414


>gi|260558538|ref|ZP_05830734.1| tyrosyl-tRNA synthetase [Enterococcus faecium C68]
 gi|261206885|ref|ZP_05921576.1| tyrosyl-tRNA synthetase [Enterococcus faecium TC 6]
 gi|289565698|ref|ZP_06446143.1| tyrosyl-tRNA synthetase [Enterococcus faecium D344SRF]
 gi|294613986|ref|ZP_06693918.1| tyrosyl-tRNA synthetase [Enterococcus faecium E1636]
 gi|260075712|gb|EEW64018.1| tyrosyl-tRNA synthetase [Enterococcus faecium C68]
 gi|260079015|gb|EEW66715.1| tyrosyl-tRNA synthetase [Enterococcus faecium TC 6]
 gi|289162556|gb|EFD10411.1| tyrosyl-tRNA synthetase [Enterococcus faecium D344SRF]
 gi|291593180|gb|EFF24757.1| tyrosyl-tRNA synthetase [Enterococcus faecium E1636]
          Length = 418

 Score =  459 bits (1182), Expect = e-127,   Method: Composition-based stats.
 Identities = 149/424 (35%), Positives = 221/424 (52%), Gaps = 23/424 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L+ R  I+Q +N   L  L  +  ++ Y G D T  S+H GHL   M++   Q  
Sbjct: 2   NIIDELTWRDAINQQTNEERLRELVEEKSISLYCGVDPTGDSMHIGHLIPFMMMKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P  L+GGGT  IGDPS R   R +   +++Q N++ +        K      +   +
Sbjct: 62  GHHPYILIGGGTGTIGDPSGRKTERVLQTMEQVQHNVDALSNQMR---KLFGKDANITFV 118

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  I  ++ LR+ G  F++N ML+ + V SRL  E  +SF EF Y ILQ+ DF+ 
Sbjct: 119 NNYDWLSKISLLEFLRDYGKNFNINTMLAKDIVASRL--EVGISFTEFTYQILQSIDFLH 176

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSGA 244
           L K YD +LQ+GG+DQWGNI  G+DL  +L+ P  + F LT PL+  A GTK GKT  GA
Sbjct: 177 LYKTYDVQLQIGGADQWGNITAGLDLIRKLEGPEAEAFGLTIPLMLKADGTKFGKTAGGA 236

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKII 302
           +WL+ + TSP+ F+Q+W N DD DVV + K  T L   EI+ +AK      E  EA++ +
Sbjct: 237 VWLDPKKTSPFEFYQFWLNQDDRDVVKYLKFFTFLSQEEIEDLAKKVETEPEKREAQRRL 296

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQH----------MPTISISKDEVSRGMGL 352
           A E+T  VH  E+ ++A       F  +I   +          MP + IS    S    +
Sbjct: 297 AEEVTRFVHSEEDLKEAQKITQALFSGNIKELNAEEIAQGFGKMPNVEIS----STPENI 352

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           + L+V      S  +AR  + + AI IN   +++    I   D      + +  GKKN+ 
Sbjct: 353 VELLVSTKIEPSKRQAREDVSNGAISINGDRVTDLNFVINPSDEFDGKFVVIRKGKKNYF 412

Query: 413 ICHL 416
           +  +
Sbjct: 413 LAKV 416


>gi|257900037|ref|ZP_05679690.1| tyrosyl-tRNA synthetase [Enterococcus faecium Com15]
 gi|257837949|gb|EEV63023.1| tyrosyl-tRNA synthetase [Enterococcus faecium Com15]
          Length = 418

 Score =  459 bits (1182), Expect = e-127,   Method: Composition-based stats.
 Identities = 149/424 (35%), Positives = 221/424 (52%), Gaps = 23/424 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L+ R  I+Q +N   L  L  +  ++ Y G D T  S+H GHL   M++   Q  
Sbjct: 2   NIIDELTWRDAINQQTNEERLRELVEEKSISLYCGVDPTGDSMHIGHLIPFMMMKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P  L+GGGT  IGDPS R   R +   +++Q N++ +        K      +   +
Sbjct: 62  GHHPYILIGGGTGTIGDPSGRKTERVLQTMEQVQHNVDALSNQMR---KLFGKDANITFV 118

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  I  ++ LR+ G  F++N ML+ + V SRL  E  +SF EF Y ILQ+ DF+ 
Sbjct: 119 NNYDWLSKISLLEFLRDYGKNFNINTMLAKDIVASRL--EVGISFTEFTYQILQSIDFLH 176

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSGA 244
           L K YD +LQ+GG+DQWGNI  G+DL  +L+ P  + F LT PL+  A GTK GKT  GA
Sbjct: 177 LHKTYDVQLQIGGADQWGNITAGLDLIRKLEGPEAEAFGLTIPLMLKADGTKFGKTAGGA 236

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKII 302
           +WL+ + TSP+ F+Q+W N DD DVV + K  T L   EI+ +AK      E  EA++ +
Sbjct: 237 VWLDPKKTSPFEFYQFWLNQDDRDVVKYLKFFTFLSQEEIEELAKKVETEPEKREAQRRL 296

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQH----------MPTISISKDEVSRGMGL 352
           A E+T  VH  E+ ++A       F  +I   +          MP + IS    S    +
Sbjct: 297 AEEVTRFVHSEEDLKEAQKITQALFSGNIKELNAEEIAQGFGKMPNVEIS----STPENI 352

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           + L+V      S  +AR  + + AI IN   +++    I   D      + +  GKKN+ 
Sbjct: 353 VELLVSTKIEPSKRQAREDVSNGAISINGDRVTDLNFVINPSDEFDGKFVVIRKGKKNYF 412

Query: 413 ICHL 416
           +  +
Sbjct: 413 LAKV 416


>gi|325268528|ref|ZP_08135158.1| tyrosine--tRNA ligase [Prevotella multiformis DSM 16608]
 gi|324989056|gb|EGC21009.1| tyrosine--tRNA ligase [Prevotella multiformis DSM 16608]
          Length = 432

 Score =  459 bits (1182), Expect = e-127,   Method: Composition-based stats.
 Identities = 140/432 (32%), Positives = 223/432 (51%), Gaps = 27/432 (6%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
            +F+  L  RG + QI    E   L  + +V+AY+G D TA SLH GHL  +M+L  LQ+
Sbjct: 2   KNFVEELRWRGMLAQIMPGTE--ELLQKEMVSAYLGTDPTADSLHIGHLCGIMMLRHLQR 59

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG-TGKTDAL 124
            GHKP  L+GG T +IGDPS + + R ++ ++ +  N E IK   S F+ +  +    A 
Sbjct: 60  CGHKPYLLVGGATGMIGDPSGKSQERNLLDAETLYHNQEAIKKQVSKFLDFDGSEPNKAE 119

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQAY 182
           M+NN  W+    ++D  R +G   +VN M++ +SV+ RL  E    LSF EF Y +LQ Y
Sbjct: 120 MVNNYDWMKDFTFLDFARVVGKHITVNYMMAKDSVQKRLNGEARDGLSFTEFTYQLLQGY 179

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKLFALTSPLLTTASGTKMGKT 240
           DF+   + +  +LQ+GG+DQWGN+  G +L  R      + + LT PL+T A G K GKT
Sbjct: 180 DFLYQYEKFGVKLQLGGNDQWGNMTTGTELIRRTLGSEAEAYCLTCPLITKADGKKFGKT 239

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEA 298
            SG IWL++  T+PY F+Q+W N+ D D   + K  T+L    ID + +   ++      
Sbjct: 240 ESGNIWLDRNRTTPYAFYQFWLNVSDEDAEKYIKIFTSLEKDVIDALIEEHRQDPGRRTL 299

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKD 344
           ++ +A E+T MVH +++ + A  A+   F  S                 + +P    SKD
Sbjct: 300 QRRLAEEVTRMVHSQDDLDMAVAASNILFGKSTKENLLQLDEQTFADVFKDVPHYEASKD 359

Query: 345 EVSRGMGLLTLIVKAG--FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNI 402
            +  G   + +  + G     S +E R+ +K   + +N   ++     +   D      +
Sbjct: 360 IL--GQPAVEVFNQEGMQIFPSKSEMRKLVKGGGVSLNKEKLAAFDQPVTADDLIDGKYL 417

Query: 403 KLSFGKKNHIIC 414
            +  GKKN+ + 
Sbjct: 418 LVQKGKKNYSLI 429


>gi|88801697|ref|ZP_01117225.1| tyrosyl-tRNA synthetase [Polaribacter irgensii 23-P]
 gi|88782355|gb|EAR13532.1| tyrosyl-tRNA synthetase [Polaribacter irgensii 23-P]
          Length = 430

 Score =  459 bits (1182), Expect = e-127,   Method: Composition-based stats.
 Identities = 141/432 (32%), Positives = 231/432 (53%), Gaps = 23/432 (5%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
            +F+  L  RG ++      E      + + +AY+G+D TA SLH G+L  +MLL   Q+
Sbjct: 2   KNFIEELQWRGMLNDSMPGTE--EHLLEEMRSAYVGFDPTADSLHIGNLVPIMLLAHFQR 59

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG-KTDAL 124
            GHKPI+L+GG T +IGDPS +   R ++  + ++ N E +K    +F+ + +  +  AL
Sbjct: 60  CGHKPIALVGGATGMIGDPSGKSSERNLLDEKTLRHNQECVKAQLGNFLDFKSKTENAAL 119

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQAY 182
           ++NN  W+  I +++ +R++G   SVN M++ +SV++R+  E  + +SF EF Y ++Q Y
Sbjct: 120 LVNNYDWMKEISFLEFIRDVGKHISVNYMMAKDSVKNRISSESKEGMSFTEFTYQMVQGY 179

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DF+ L +     LQMGGSDQWGNI  G +L  R+   K +A+T PL+T + G+K GK+  
Sbjct: 180 DFLHLFRENATTLQMGGSDQWGNITTGTELIRRIAGGKGYAITCPLITKSDGSKFGKSEG 239

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKK 300
           G +WL+ + TS Y F+QYW N  D D   + +  T L    ++ +       + +   +K
Sbjct: 240 GNVWLDAKRTSAYKFYQYWLNTSDEDAEKYIRIFTFLDQKTVESLIAEHSEAQHMRVLQK 299

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDEV 346
            +  E+T +VHG+E  EKA  A+   F  S  +                +P  ++S   +
Sbjct: 300 RLGEEVTLLVHGKEAYEKAIAASNILFGKSTAADLKALDEQTFLDVFDGVPQATVSLAAI 359

Query: 347 SRGMGLL-TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLS 405
             G+ ++  L  +  F  S  +ARR LK NAI +N   I  E   I  +D  +   + L 
Sbjct: 360 EEGLDMIGALAAQTSFLDSNGDARRALKENAISVNKEKIK-ENYTISKEDLIANKYVLLQ 418

Query: 406 FGKKNHIICHLC 417
            GKK + +  + 
Sbjct: 419 RGKKTYYLLVVA 430


>gi|297170695|gb|ADI21718.1| tyrosyl-tRNA synthetase [uncultured actinobacterium HF0130_15N16]
          Length = 422

 Score =  459 bits (1181), Expect = e-127,   Method: Composition-based stats.
 Identities = 154/424 (36%), Positives = 224/424 (52%), Gaps = 20/424 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D LS L  RG IH  ++   L    + G V  Y G+D TA SLH G+L  L+ L   Q  
Sbjct: 2   DILSDLEARGLIHDTTDRAALASRLAAGPVVLYCGFDPTAESLHVGNLIGLLTLRRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH PISL GG T ++GDPS RD  R ++  + + +N+E I      F+++  G++ A +L
Sbjct: 62  GHLPISLAGGATGMVGDPSGRDSERNLLDDEGLAKNLEGILPQLRQFLEF-DGESPAKLL 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           +N  W      +D LR+IG   +VN+M++ +SVRSR+     +SF EF+YM+LQ YDF+ 
Sbjct: 121 DNRAWTVGTSVLDFLRDIGKHVTVNQMIAKDSVRSRMSEGDGISFTEFSYMLLQGYDFLW 180

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG-AI 245
           LA+N  C LQ+GGSDQWGNI+ G DL  R       A+T PLLT   G+K GKT  G  I
Sbjct: 181 LAENEKCELQVGGSDQWGNIVLGADLIRRKLGKTAHAMTWPLLTKPDGSKYGKTAGGETI 240

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIA 303
           WL+ E  SPY F+Q W  +DD++V     +LT L + E+D +         +   ++ +A
Sbjct: 241 WLSAEKMSPYRFYQSWIGVDDSEVRKLLLQLTFLSVQEVDSLVAEHEDQPHLRIGQRALA 300

Query: 304 TEITTMVHGREEAEKAATAAMECFD------------MSIHSQHMPTISISKDEVSRGMG 351
            EIT +VHG   A+ A  A+   FD            +   S+ +P   I+  +VS    
Sbjct: 301 NEITKIVHGEPAADSAIEASQVLFDSTMDISAVSESALDFVSREVPYSEIALADVS---- 356

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           L+ L+V+ G   S  EA+R +    + +N    S+        D      + L  GKK+ 
Sbjct: 357 LVDLLVETGLCQSRKEAKRAVTEGGVYVNGERPSDSGFAPTSNDLLHGKYLLLRRGKKSW 416

Query: 412 IICH 415
            +  
Sbjct: 417 HLLK 420


>gi|293568442|ref|ZP_06679762.1| tyrosyl-tRNA synthetase [Enterococcus faecium E1071]
 gi|294619407|ref|ZP_06698864.1| tyrosyl-tRNA synthetase [Enterococcus faecium E1679]
 gi|314939923|ref|ZP_07847126.1| tyrosyl-tRNA synthetase [Enterococcus faecium TX0133a04]
 gi|314941532|ref|ZP_07848419.1| tyrosyl-tRNA synthetase [Enterococcus faecium TX0133C]
 gi|314953825|ref|ZP_07856688.1| tyrosyl-tRNA synthetase [Enterococcus faecium TX0133A]
 gi|314993583|ref|ZP_07858938.1| tyrosyl-tRNA synthetase [Enterococcus faecium TX0133B]
 gi|314997778|ref|ZP_07862691.1| tyrosyl-tRNA synthetase [Enterococcus faecium TX0133a01]
 gi|291588778|gb|EFF20606.1| tyrosyl-tRNA synthetase [Enterococcus faecium E1071]
 gi|291594359|gb|EFF25779.1| tyrosyl-tRNA synthetase [Enterococcus faecium E1679]
 gi|313588222|gb|EFR67067.1| tyrosyl-tRNA synthetase [Enterococcus faecium TX0133a01]
 gi|313591960|gb|EFR70805.1| tyrosyl-tRNA synthetase [Enterococcus faecium TX0133B]
 gi|313594160|gb|EFR73005.1| tyrosyl-tRNA synthetase [Enterococcus faecium TX0133A]
 gi|313599684|gb|EFR78527.1| tyrosyl-tRNA synthetase [Enterococcus faecium TX0133C]
 gi|313640837|gb|EFS05417.1| tyrosyl-tRNA synthetase [Enterococcus faecium TX0133a04]
          Length = 418

 Score =  459 bits (1181), Expect = e-127,   Method: Composition-based stats.
 Identities = 149/424 (35%), Positives = 222/424 (52%), Gaps = 23/424 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L+ R  I+Q +N   L  L  +  ++ Y G D T  S+H GHL   M++   Q  
Sbjct: 2   NIIDELTWRDAINQQTNEERLRELVEEKSISLYCGVDPTGDSMHIGHLIPFMMMKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P  L+GGGT  IGDPS R   R +   +++Q N++ +        K      +   +
Sbjct: 62  GHHPYILIGGGTGTIGDPSGRKTERVLQTMEQVQHNVDALSNQMR---KLFGKDANITFV 118

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  I  ++ LR+ G  F++N ML+ + V SRL  E  +SF EF Y ILQ+ DF+ 
Sbjct: 119 NNYDWLSKISLLEFLRDYGKNFNINTMLAKDIVASRL--EVGISFTEFTYQILQSIDFLH 176

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKL--FALTSPLLTTASGTKMGKTLSGA 244
           L K YD +LQ+GG+DQWGNI  G+DL  +L+ P++  F LT PL+  A GTK GKT  GA
Sbjct: 177 LHKTYDVQLQIGGADQWGNITAGLDLIRKLEGPEVEAFGLTIPLMLKADGTKFGKTAGGA 236

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKII 302
           +WL+ + TSP+ F+Q+W N DD DVV + K  T L   EI+ +AK      E  EA++ +
Sbjct: 237 VWLDPKKTSPFEFYQFWLNQDDRDVVKYLKFFTFLSQEEIEDLAKKVETEPEKREAQRRL 296

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQH----------MPTISISKDEVSRGMGL 352
           A E+T  VH  E+ ++A       F  +I   +          MP + IS    S    +
Sbjct: 297 AEEVTRFVHSEEDLKEAQKITQALFSGNIKELNAEEIAQGFGKMPNVEIS----STPENI 352

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           + L+V      S  +AR  + + AI IN   +++    I   D      + +  GKKN+ 
Sbjct: 353 VELLVSTKIEPSKRQAREDVSNGAISINGDRVTDLNFVINPSDEFDGKFVVIRKGKKNYF 412

Query: 413 ICHL 416
           +  +
Sbjct: 413 LAKV 416


>gi|300172408|ref|YP_003771573.1| tyrosyl-tRNA synthetase [Leuconostoc gasicomitatum LMG 18811]
 gi|299886786|emb|CBL90754.1| Tyrosyl-tRNA synthetase [Leuconostoc gasicomitatum LMG 18811]
          Length = 415

 Score =  459 bits (1181), Expect = e-127,   Method: Composition-based stats.
 Identities = 146/424 (34%), Positives = 218/424 (51%), Gaps = 25/424 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG ++QI++ + L    + G + AY+G D TA SLH GHL   M+L   Q  
Sbjct: 2   NFIEDLKWRGALNQITDEKGLLDAMASGKIGAYVGTDPTADSLHLGHLIPFMVLKRFQNA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           G K + ++GG T  IGDP      R+++  +++ EN + I    +       G  D  ++
Sbjct: 62  GGKAVIIIGGATGAIGDPRP-TTERQLLTQEQLVENEKGITAQVTKLF----GDNDTRIV 116

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  +   D LR+ G  FS+N ML  + V SRL  E  +SF EF Y +LQ  DF E
Sbjct: 117 NNNDWLGKLTLTDFLRDYGKLFSINVMLKKDVVASRL--ETGISFTEFTYQVLQGIDFHE 174

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKLFALTSPLLTTASGTKMGKTLSGA 244
           L +  D +LQ+GGSDQWGNI  GIDL   L+    K F LT PL+T ++G K GK+   A
Sbjct: 175 LWRREDVKLQIGGSDQWGNITSGIDLIHSLEGNAAKAFGLTIPLMTDSTGKKFGKSEGNA 234

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKII 302
           IWL+ E TSPY F+Q+W N +DADVV + K  T L   EID +AK         EA++ +
Sbjct: 235 IWLDPEKTSPYTFYQFWLNQNDADVVKYLKYFTFLNSEEIDALAKAIDTNPGAREAQRRL 294

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGL 352
           A E+T  VHG+   + A   +   F   + +            +P+  I+    +    +
Sbjct: 295 AQEVTKFVHGQAAVDDAEQLSKALFSGDVATLSAAQIADAFGGVPSFDIT----AESKNI 350

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           +  +V  G   S  +AR  + + AI IN   +++   +I          + +  GKK + 
Sbjct: 351 IDFLVDGGVDQSKRQAREDVNNGAITINGEKVTDVATEISPSAHYDGKFVLVRRGKKRYF 410

Query: 413 ICHL 416
           +  +
Sbjct: 411 LGKV 414


>gi|291456438|ref|ZP_06595828.1| tyrosine--tRNA ligase [Bifidobacterium breve DSM 20213]
 gi|291381715|gb|EFE89233.1| tyrosine--tRNA ligase [Bifidobacterium breve DSM 20213]
          Length = 440

 Score =  458 bits (1180), Expect = e-127,   Method: Composition-based stats.
 Identities = 139/420 (33%), Positives = 216/420 (51%), Gaps = 20/420 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L  RG I Q ++   L    +   +T Y G+D TA+SLH G+L QL+ +  LQ   
Sbjct: 15  LLEELEWRGLISQSTDRDRLAEALNGEPITYYCGFDPTAASLHIGNLVQLINMRHLQLAC 74

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H PI+L+GG T +IGDP    E R +     +    +++K      ++   G      ++
Sbjct: 75  HHPIALVGGATGLIGDPRQSGE-RTLNPKDVVAGWADRLKNQIGGILE-TEGANPVRFVS 132

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W  S+  ID LR++G  F +  ML+ ++V  RL  E+ +SF EF+Y +LQ  DF+ L
Sbjct: 133 NYDWTASMTVIDFLRDVGKNFRLGTMLAKDTVARRLNSEEGISFTEFSYQVLQGNDFLHL 192

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
              Y C L++GGSDQWGN+  G+DL  +++   +   TSP++T ASG K GK+   A+WL
Sbjct: 193 FDEYHCTLELGGSDQWGNLTSGLDLIHKVRGVDVNVFTSPIITDASGKKFGKSEGNAVWL 252

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIATE 305
           +  M SPY F+Q+W N  D ++ S  K  T LP +EI+R+ +         EA+K +A E
Sbjct: 253 DATMLSPYKFYQFWINRPDVEMESLLKAFTFLPKAEIERLVEESKTNPGKREAQKTLAWE 312

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISK--------DEVSR--------G 349
           +T+ VHG    + A  A+   F    + + +   ++          DE           G
Sbjct: 313 VTSFVHGEAATQAAIDASGALFGRGGNLEDIDEETLESVLDGFKVVDENGEHVFPVSKPG 372

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
             ++     AG   S +EARR +KS  + +NN+ I +E+  +   DF +     +  GKK
Sbjct: 373 DRVIDAAQAAGLFKSASEARRAIKSGGVYLNNNRIEDEEQVLAEADFLAGRFALIRRGKK 432


>gi|50954390|ref|YP_061678.1| tyrosyl-tRNA synthetase [Leifsonia xyli subsp. xyli str. CTCB07]
 gi|81391211|sp|Q6AGC2|SYY_LEIXX RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|50950872|gb|AAT88573.1| tyrosyl-tRNA synthetase [Leifsonia xyli subsp. xyli str. CTCB07]
          Length = 442

 Score =  458 bits (1180), Expect = e-127,   Method: Composition-based stats.
 Identities = 134/419 (31%), Positives = 214/419 (51%), Gaps = 12/419 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L  RG ++  ++   L  L +   +  Y G+D TA SLH G+L QL+ +  LQ  
Sbjct: 23  NVWDELIWRGLVYVSTDEAALKQLLAGEPIAYYCGFDPTAPSLHLGNLVQLLTMRRLQLA 82

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+P  L+GG T +IGDP      R +   + + E +  ++   + F+    G     ++
Sbjct: 83  GHRPFGLVGGSTGLIGDPKP-SAERTLNAKETVAEWVGSLREQVTRFLS-AEGDNAVRLV 140

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   +  ID LREIG  F V  ML  ++V +RL  ++ +S+ EF+Y ILQ  D++E
Sbjct: 141 NNLDWTAPLSAIDFLREIGKHFRVGAMLKKDAVAARLNSDEGISYTEFSYQILQGLDYLE 200

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + + C LQ GGSDQWGN+  G +L  R++     A+ +PL+T + GTK GK+   A+W
Sbjct: 201 LYRQHGCVLQTGGSDQWGNLTSGTELIRRVEGGHAHAVGTPLITNSDGTKFGKSEGNAVW 260

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIAT 304
           L+  +TSPY  +Q+W N DDADV++  K  T L   EI+R+ +   +E    EA++ +A 
Sbjct: 261 LDPALTSPYAMYQFWLNTDDADVIARLKVFTFLHRDEIERLERAVAEEPFRREAQRRLAL 320

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIH--SQHMPTI-----SISKDEVSRGMGLLTLIV 357
           ++T++VHG   AE    A+   F        Q   T+      +     + G+ +   +V
Sbjct: 321 DVTSLVHGAAAAEAVIAASEALFGRGGDLAQQDTDTLASALRELPHTVSAPGVAIAQALV 380

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             G   S +EARR +    +  NN+ + +    +        G + L  GKK      +
Sbjct: 381 DTGLTKSLSEARRAVAQGGVSANNATVQDADAPVGDA-LLPGGMLVLRRGKKTLAGVFV 438


>gi|91216088|ref|ZP_01253056.1| tyrosyl-tRNA synthetase [Psychroflexus torquis ATCC 700755]
 gi|91185605|gb|EAS71980.1| tyrosyl-tRNA synthetase [Psychroflexus torquis ATCC 700755]
          Length = 431

 Score =  458 bits (1180), Expect = e-127,   Method: Composition-based stats.
 Identities = 150/433 (34%), Positives = 229/433 (52%), Gaps = 23/433 (5%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
            K+DF+  ++ RG IH +          ++    AY+G D TA SLH GHL  +M+L   
Sbjct: 1   MKNDFIEEVTWRGMIHDVMPGT--QDHLNESPRAAYVGIDPTADSLHIGHLVSVMMLRHF 58

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG-TGKTD 122
           Q  GHKP++L+GG T +IGDPS + + R ++    ++ N   +K   S F+++       
Sbjct: 59  QLAGHKPVALVGGATGMIGDPSGKSQERNLLDEATLRHNQNALKAQLSKFLEFDAKEDNS 118

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQ 180
           A+++NN  W+    ++D +R++G   +VN M+S ESV+ RL  E  + +SF EF Y ++Q
Sbjct: 119 AILVNNYDWMKDFSFLDFIRDVGKHITVNYMMSKESVKKRLSSESKEGMSFTEFTYQLVQ 178

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
            YDF+ L +   C LQMGGSDQWGNI  G +L  R+   K FALT PL+T A GTK GKT
Sbjct: 179 GYDFLHLYRTQKCTLQMGGSDQWGNITTGTELIRRIDQGKGFALTCPLITKADGTKFGKT 238

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEA 298
            +G IWL+ + TSPY F+QYW N  D D   F K  T L   EI        +   + + 
Sbjct: 239 ATGNIWLDPKKTSPYKFYQYWINTSDEDAEIFIKIFTFLSQKEISDLVNTHKEQPHLRQL 298

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKD 344
           +  +A EIT  VH ++  +KA  A+   F  S                 + +P   +SK+
Sbjct: 299 QSRLADEITAAVHSKKGLDKAKEASQVLFGKSTEEDLAKLDEATFLDVFEGVPLKELSKE 358

Query: 345 EVSRGMGLLTLI-VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
            ++    ++  +  +  F +S  EARR LK N+I +N S +      +  +D  +   + 
Sbjct: 359 ILNDNFDMIAALSAETEFLSSNGEARRALKENSISVNKSKV-GLDYTLTEKDLINGKYVL 417

Query: 404 LSFGKKNHIICHL 416
           ++ GKKN  +   
Sbjct: 418 INKGKKNTYLIKF 430


>gi|293572271|ref|ZP_06683270.1| tyrosyl-tRNA synthetase [Enterococcus faecium E980]
 gi|291607730|gb|EFF37053.1| tyrosyl-tRNA synthetase [Enterococcus faecium E980]
          Length = 418

 Score =  458 bits (1180), Expect = e-127,   Method: Composition-based stats.
 Identities = 148/424 (34%), Positives = 220/424 (51%), Gaps = 23/424 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L+ R  I+Q +N   L  L  +  ++ Y G D T  S+H GHL   M++   Q  
Sbjct: 2   NIIDELTWRDAINQQTNEERLRELVEEKSISLYCGVDPTGDSMHIGHLIPFMMMKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P  L+GGGT  IGDPS R   R +   +++Q N++ +        K      +   +
Sbjct: 62  GHHPYILIGGGTGTIGDPSGRKTERVLQTMEQVQHNVDALSNQMR---KLFGKDANITFV 118

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  I  ++ LR+ G  F++N ML+ + V SRL  E  +SF EF Y ILQ+ DF+ 
Sbjct: 119 NNYDWLSKISLLEFLRDYGKNFNINTMLAKDIVASRL--EVGISFTEFTYQILQSIDFLH 176

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKLFALTSPLLTTASGTKMGKTLSGA 244
           L K YD +LQ+GG+DQWGNI  G+DL  +L+    + F LT PL+  A GTK GKT  GA
Sbjct: 177 LHKTYDVQLQIGGADQWGNITAGLDLIRKLEGSEAEAFGLTIPLMLKADGTKFGKTAGGA 236

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKII 302
           +WL+ + TSP+ F+Q+W N DD DVV + K  T L   EI+ +AK      E  EA++ +
Sbjct: 237 VWLDPKKTSPFEFYQFWLNQDDRDVVKYLKFFTFLSQEEIEELAKKVETEPEKREAQRRL 296

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQH----------MPTISISKDEVSRGMGL 352
           A E+T  VH  E+ ++A       F  +I   +          MP + IS    S    +
Sbjct: 297 AEEVTRFVHSEEDLKEAQKITQALFSGNIKELNAEEIAQGFGKMPNVEIS----STPENI 352

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           + L+V      S  +AR  + + AI IN   +++    I   D      + +  GKKN+ 
Sbjct: 353 VELLVSTKIEPSKRQAREDVSNGAISINGDRVTDLNFVINPSDEFDGKFVVIRKGKKNYF 412

Query: 413 ICHL 416
           +  +
Sbjct: 413 LAKV 416


>gi|285808518|gb|ADC36041.1| putative tyrosyl-tRNA synthetase [uncultured bacterium 270]
          Length = 428

 Score =  458 bits (1180), Expect = e-127,   Method: Composition-based stats.
 Identities = 154/431 (35%), Positives = 237/431 (54%), Gaps = 24/431 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L  R  + + +    L    + G VTAYIG+D TASSLH G L  +M L  LQ+ 
Sbjct: 2   NLFDELQWRAMVSEAT--EGLADAFATGRVTAYIGFDPTASSLHVGSLLTVMGLARLQRF 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH PI+++GGGT +IGDPS + + R ++ +++I  N+  I+     F+ + T  T A ++
Sbjct: 60  GHAPIAIVGGGTGMIGDPSGKSQERVLLSAEQIDANVVGIRAQLERFLDFDTPGTAARIV 119

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL +I  +  LR+ G  F+VN M+  ESV  RL+ E  +SF EF+Y++LQAYDF++
Sbjct: 120 NNADWLATIDLVSFLRDAGKHFTVNYMMQKESVSRRLESEDGISFTEFSYLVLQAYDFLQ 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L   Y C LQMGG+DQWGNI  GIDL  +++  K   L  PL+ +ASG K GKT +G IW
Sbjct: 180 LFDRYGCTLQMGGTDQWGNITAGIDLIRKVRAKKAHGLVWPLMKSASGAKFGKTEAGTIW 239

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIAT 304
           L+   T    F Q+W N DD DV+++ K  T L   E+D +        E   A++++A 
Sbjct: 240 LDAARTPVQEFRQFWLNTDDRDVIAYLKFFTFLTRDEVDDLEAQVQRVPEQRAAQQVLAD 299

Query: 305 EITTMVHGREEAEKAATAAMECFDMS----------------IHSQHMPTISISKDEVS- 347
           ++TT+VHGRE+A +A +A    F  S                  +  +P+ SI+ DE   
Sbjct: 300 QVTTLVHGREDAARAESANAVLFGASTTGGAVDAAQLADSLLAITGDVPSTSIAADEFEG 359

Query: 348 RGMGLLTLIVKA-GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+ ++ ++ +A G   S +EARR ++   + +N+  I++   ++   D        L  
Sbjct: 360 DGLSVVDVVARATG--GSKSEARRLVQQGGVSVNDHKIADANARLTRADALDGRVFLLRK 417

Query: 407 GKKNHIICHLC 417
           G +   +  L 
Sbjct: 418 GSRQRFVIRLT 428


>gi|69244479|ref|ZP_00602895.1| Tyrosyl-tRNA synthetase, class Ib [Enterococcus faecium DO]
 gi|257879015|ref|ZP_05658668.1| tyrosyl-tRNA synthetase [Enterococcus faecium 1,230,933]
 gi|257881639|ref|ZP_05661292.1| tyrosyl-tRNA synthetase [Enterococcus faecium 1,231,502]
 gi|257886270|ref|ZP_05665923.1| tyrosyl-tRNA synthetase [Enterococcus faecium 1,231,501]
 gi|257890867|ref|ZP_05670520.1| tyrosyl-tRNA synthetase [Enterococcus faecium 1,231,410]
 gi|258615352|ref|ZP_05713122.1| tyrosyl-tRNA synthetase [Enterococcus faecium DO]
 gi|293557049|ref|ZP_06675609.1| tyrosyl-tRNA synthetase [Enterococcus faecium E1039]
 gi|293562866|ref|ZP_06677338.1| tyrosyl-tRNA synthetase [Enterococcus faecium E1162]
 gi|294622700|ref|ZP_06701659.1| tyrosyl-tRNA synthetase [Enterococcus faecium U0317]
 gi|314950252|ref|ZP_07853535.1| tyrosyl-tRNA synthetase [Enterococcus faecium TX0082]
 gi|68196420|gb|EAN10848.1| Tyrosyl-tRNA synthetase, class Ib [Enterococcus faecium DO]
 gi|257813243|gb|EEV42001.1| tyrosyl-tRNA synthetase [Enterococcus faecium 1,230,933]
 gi|257817297|gb|EEV44625.1| tyrosyl-tRNA synthetase [Enterococcus faecium 1,231,502]
 gi|257822126|gb|EEV49256.1| tyrosyl-tRNA synthetase [Enterococcus faecium 1,231,501]
 gi|257827227|gb|EEV53853.1| tyrosyl-tRNA synthetase [Enterococcus faecium 1,231,410]
 gi|291597838|gb|EFF28971.1| tyrosyl-tRNA synthetase [Enterococcus faecium U0317]
 gi|291600869|gb|EFF31161.1| tyrosyl-tRNA synthetase [Enterococcus faecium E1039]
 gi|291605190|gb|EFF34652.1| tyrosyl-tRNA synthetase [Enterococcus faecium E1162]
 gi|313643391|gb|EFS07971.1| tyrosyl-tRNA synthetase [Enterococcus faecium TX0082]
          Length = 418

 Score =  458 bits (1180), Expect = e-127,   Method: Composition-based stats.
 Identities = 149/424 (35%), Positives = 221/424 (52%), Gaps = 23/424 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L+ R  I+Q +N   L  L  +  ++ Y G D T  S+H GHL   M++   Q  
Sbjct: 2   NIIDELTWRDAINQQTNEERLRELVEEKSISLYCGVDPTGDSMHIGHLIPFMMMKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P  L+GGGT  IGDPS R   R +   +++Q N++ +        K      +   +
Sbjct: 62  GHHPYILIGGGTGTIGDPSGRKTERVLQTMEQVQHNVDALSNQMR---KLFGKDANITFV 118

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  I  ++ LR+ G  F++N ML+ + V SRL  E  +SF EF Y ILQ+ DF+ 
Sbjct: 119 NNYDWLSKISLLEFLRDYGKNFNINTMLAKDIVASRL--EVGISFTEFTYQILQSIDFLH 176

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSGA 244
           L K YD +LQ+GG+DQWGNI  G+DL  +L+ P  + F LT PL+  A GTK GKT  GA
Sbjct: 177 LHKTYDVQLQIGGADQWGNITAGLDLIRKLEGPEAEAFGLTIPLMLKADGTKFGKTAGGA 236

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKII 302
           +WL+ + TSP+ F+Q+W N DD DVV + K  T L   EI+ +AK      E  EA++ +
Sbjct: 237 VWLDPKKTSPFEFYQFWLNQDDRDVVKYLKFFTFLSQEEIEDLAKKVETEPEKREAQRRL 296

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQH----------MPTISISKDEVSRGMGL 352
           A E+T  VH  E+ ++A       F  +I   +          MP + IS    S    +
Sbjct: 297 AEEVTRFVHSEEDLKEAQKITQALFSGNIKELNAEEIAQGFGKMPNVEIS----STPENI 352

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           + L+V      S  +AR  + + AI IN   +++    I   D      + +  GKKN+ 
Sbjct: 353 VELLVSTKIEPSKRQAREDVSNGAISINGDRVTDLNFVINPSDEFDGKFVVIRKGKKNYF 412

Query: 413 ICHL 416
           +  +
Sbjct: 413 LAKV 416


>gi|31789473|gb|AAP58586.1| putative tyrosyl-tRNA synthetase [uncultured Acidobacteria
           bacterium]
          Length = 422

 Score =  458 bits (1179), Expect = e-127,   Method: Composition-based stats.
 Identities = 150/423 (35%), Positives = 238/423 (56%), Gaps = 16/423 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D LS    RG ++  +    L    + G + AY G+D TA+SLH G L  ++ L  LQ+ 
Sbjct: 2   DALSEFEWRGTLYDGT--EGLREALASGPLRAYAGFDPTAASLHVGSLMPILGLARLQRL 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH PI+++GGGT +IGDPS +   R++M S ++ E++  I+     F+ +G G   AL++
Sbjct: 60  GHTPIAVVGGGTGLIGDPSGKTLERQLMDSSKVDEHVAGIRRQLERFLDFGRGPASALLV 119

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           +N  WL S+  I  +R++G  F+VN ML+ ESV+ R+ RE  +S+ EF+Y++LQAYD++ 
Sbjct: 120 DNAEWLTSLGAIAFMRDVGKHFTVNYMLAKESVKGRIDREDGISYTEFSYLLLQAYDYLV 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L   + C LQ+GGSDQWGNI  GI+L  RL+  K   L  PL+TTA+GTK GKT +GAIW
Sbjct: 180 LHDRHGCALQIGGSDQWGNITAGIELIRRLRGAKAHGLVMPLVTTATGTKFGKTEAGAIW 239

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIAT 304
           L+  +T PY F+Q+W N DD D V + K  T L  + +  +    L   E   A++ +A 
Sbjct: 240 LDPSLTKPYEFYQFWLNTDDRDAVRYLKFFTFLDAARVGELEASSLAEPEKRVAQRELAR 299

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLT 354
           E+T +VHG +    A  A+ + F   +             ++P+ +++  +   G  L  
Sbjct: 300 EVTRLVHGSQAVLDAEAASEKLFRGDVTQMSVDELLQVFANVPSSTVAFSD--DGWALAD 357

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           L+   G   S  EA+R +++  + +N   I  EK ++  +D        +  GKK++ + 
Sbjct: 358 LVTSVGVTKSKGEAQRLVRAGGLYVNERRIGEEKARLTAEDAIGGQVFVIRKGKKDNFLV 417

Query: 415 HLC 417
            + 
Sbjct: 418 RIS 420


>gi|27367282|ref|NP_762809.1| tyrosyl-tRNA synthetase [Vibrio vulnificus CMCP6]
 gi|81447202|sp|Q8D5N2|SYY1_VIBVU RecName: Full=Tyrosyl-tRNA synthetase 1; AltName:
           Full=Tyrosine--tRNA ligase 1; Short=TyrRS 1
 gi|27358851|gb|AAO07799.1| tyrosyl-tRNA synthetase [Vibrio vulnificus CMCP6]
          Length = 422

 Score =  458 bits (1179), Expect = e-127,   Method: Composition-based stats.
 Identities = 148/419 (35%), Positives = 229/419 (54%), Gaps = 13/419 (3%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L++RG I Q ++  +L  L  Q   T Y G+D TA SLH GHL  L++L   Q  G
Sbjct: 6   LFDDLAQRGLIAQTTDLEQLIALFRQ-PQTLYCGFDPTAGSLHIGHLVPLIMLKRFQDAG 64

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+ I+L+GG T +IGDPSF+   R +  ++ +   +  +       +     +    M+N
Sbjct: 65  HQGIALIGGATGMIGDPSFKASERSLNSAETVAAWVNALATQIQQLMTPHLTQPLV-MVN 123

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDFVE 186
           N  W+ SI  I   R+IG  FSVN M+  ESV+ RL R +Q +SF EF+Y +LQ+YDF +
Sbjct: 124 NADWMQSIGVIAFFRDIGKHFSVNAMIQRESVKQRLARPDQGISFTEFSYSLLQSYDFAQ 183

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + + C LQ+GG+DQWGNI+ GIDL  RL    +  LT PL+T + GTK GKT  GAIW
Sbjct: 184 LNQTHQCALQIGGNDQWGNIVSGIDLTRRLNGTNVHGLTLPLITKSDGTKFGKTEGGAIW 243

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIAT 304
           L+   TSPY F+Q+W N DDADV  F +  T L + +I+++      ++ +  A++I+A 
Sbjct: 244 LDAAKTSPYMFYQFWLNCDDADVYRFLRYYTFLSVEQIEQLEATDKAQVGKPSAQRILAE 303

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRGMGLLTLIVK 358
           E+T  VHG+   E A   +   F   ++  ++  +       +   +++    ++TL+++
Sbjct: 304 EMTRFVHGQAGLESAQRISQALFSGQLNQLNLAELKQLEQDGLPCRQLAHVSDVVTLLLE 363

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            G A+S  +AR  L++ AI+IN       +L +            +  GKK   +  L 
Sbjct: 364 TGLASSKRQAREWLENGAIRINGERW--HELTLAQTFALYDQYYIVQRGKKQFAMVKLA 420


>gi|89889440|ref|ZP_01200951.1| tyrosyl-tRNA synthetase [Flavobacteria bacterium BBFL7]
 gi|89517713|gb|EAS20369.1| tyrosyl-tRNA synthetase [Flavobacteria bacterium BBFL7]
          Length = 439

 Score =  458 bits (1179), Expect = e-127,   Method: Composition-based stats.
 Identities = 158/431 (36%), Positives = 242/431 (56%), Gaps = 24/431 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F   L  RG IH I    E   L  + VVT YIG+D TA SLH G + Q++LL  LQ++
Sbjct: 11  NFAEELRWRGMIHDIMPGTE--ELLEKEVVTGYIGFDPTADSLHIGSMVQIILLMHLQRS 68

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY--GTGKTDAL 124
           GH+PI+L+GG T +IGDPS + + R ++  + + +NI  ++ + S FI +  G   T A+
Sbjct: 69  GHRPIALVGGATGMIGDPSGKSDERNLLTQEILDKNIAGVQSVLSRFIDFEKGDDATRAV 128

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK-REQSLSFLEFNYMILQAYD 183
           ++NN  W+ +   ID  R++G   +VN M++ +SV+ R++   + +SF EF Y + Q YD
Sbjct: 129 LVNNYDWMKNFSLIDFARDVGKHITVNYMMAKDSVKKRVQGEGEGMSFTEFTYQLFQGYD 188

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           +V L ++  C+LQ+GGSDQWGNI  G +L  R    K +ALT+PL+T A GTK GKT SG
Sbjct: 189 YVHLYEHMGCKLQIGGSDQWGNITTGTELVRRKLGGKAYALTTPLVTKADGTKFGKTESG 248

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKI 301
            IWL+ + TS Y F+Q+W N  D D V++ K  T L     + + +   K+      +K 
Sbjct: 249 NIWLDTDKTSVYKFFQFWINATDEDAVNWIKIFTFLDQQTCESLIEEHAKDPGYRVLQKR 308

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS---------------QHMPTISISKDEV 346
           +A E+T MVHGRE  E A  A+   F  ++                 + +P   ++KD +
Sbjct: 309 LAEEVTVMVHGREAYEVALKASQILFSKTVTPEQWSEFNQETLLDIFEGVPQAEVAKDAL 368

Query: 347 SRGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLS 405
             G+  +TL+     F  S +E RR LK N++ IN + I N +  I   D  +   + L 
Sbjct: 369 KDGVDPVTLMADLTSFLPSNSEVRRALKENSLSINKNKI-NAETVITTDDLIADNMLLLQ 427

Query: 406 FGKKNHIICHL 416
            GK+N+ +  +
Sbjct: 428 RGKRNYFLVLV 438


>gi|288803474|ref|ZP_06408906.1| tyrosine--tRNA ligase [Prevotella melaninogenica D18]
 gi|288334084|gb|EFC72527.1| tyrosine--tRNA ligase [Prevotella melaninogenica D18]
          Length = 432

 Score =  458 bits (1178), Expect = e-127,   Method: Composition-based stats.
 Identities = 139/432 (32%), Positives = 224/432 (51%), Gaps = 27/432 (6%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
            +F+  L  RG + Q+    E   +  + +V+AY+G D TA SLH GHL  +M+L  LQ+
Sbjct: 2   KNFVEELRWRGMLAQMMPGTE--EMLQKEMVSAYLGTDPTADSLHIGHLCGIMMLRHLQR 59

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG-TGKTDAL 124
            GHKP  L+GG T +IGDPS + + R ++ ++ +  N E IK   S F+ +       A 
Sbjct: 60  CGHKPYLLVGGATGMIGDPSGKSQERNLLDTETLYHNQEAIKKQVSKFLDFDGNEPNKAE 119

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL--KREQSLSFLEFNYMILQAY 182
           M+NN  W+    ++D  R +G   +VN M++ +SV+ RL  +    LSF EF Y +LQ Y
Sbjct: 120 MVNNYDWMKDFTFLDFARLVGKHITVNYMMAKDSVKKRLSGESHDGLSFTEFTYQLLQGY 179

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKT 240
           DF+ L + +  +LQ+GG+DQWGN+  G +L  R      + + LT PL+T A G K GKT
Sbjct: 180 DFLYLFEKFGVKLQLGGNDQWGNMTTGTELIRRTLGNETETYCLTCPLITKADGKKFGKT 239

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEA 298
            SG IWL++  T+PY F+Q+W N+ D D   + K  T+L    ID + +   ++      
Sbjct: 240 ESGNIWLDRNRTTPYAFYQFWLNVSDDDAEKYIKIFTSLEKDVIDNLIEEHRQDPGRRTL 299

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKD 344
           +  +A E+T MVH +E+ + A  A+   F  S                 + +P   +SKD
Sbjct: 300 QYRLAEEVTRMVHSQEDLDMAIAASNILFGKSTKENLLQLDEQTFTDVFKDVPHYEVSKD 359

Query: 345 EVSRGMGLLTLIVKAG--FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNI 402
            +  G   + +  + G     S +E R+ +K   + +N   ++     +  +D      +
Sbjct: 360 VL--GQPAVDVFNQEGMQIFPSKSEMRKLVKGGGVALNKEKLAAFDQPVTAEDLIDGKYL 417

Query: 403 KLSFGKKNHIIC 414
            +  GKKN+ + 
Sbjct: 418 LVQKGKKNYSLI 429


>gi|37677009|ref|NP_937405.1| tyrosyl-tRNA synthetase [Vibrio vulnificus YJ016]
 gi|320159093|ref|YP_004191471.1| tyrosyl-tRNA synthetase, cluster 1 [Vibrio vulnificus MO6-24/O]
 gi|81755134|sp|Q7MCN7|SYY1_VIBVY RecName: Full=Tyrosyl-tRNA synthetase 1; AltName:
           Full=Tyrosine--tRNA ligase 1; Short=TyrRS 1
 gi|37201553|dbj|BAC97375.1| Tyrosyl-tRNA synthetase [Vibrio vulnificus YJ016]
 gi|319934405|gb|ADV89268.1| tyrosyl-tRNA synthetase cluster 1 [Vibrio vulnificus MO6-24/O]
          Length = 422

 Score =  458 bits (1178), Expect = e-127,   Method: Composition-based stats.
 Identities = 147/419 (35%), Positives = 228/419 (54%), Gaps = 13/419 (3%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L++RG I Q ++  +L  L  Q   T Y G+D TA SLH GHL  L++L   Q  G
Sbjct: 6   LFDDLAQRGLIAQTTDLEQLIALFRQ-PQTLYCGFDPTAGSLHIGHLVPLIMLKRFQDAG 64

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+ I+L+GG T +IGDPSF+   R +  ++ +   +  +       +     +    M+N
Sbjct: 65  HQGIALIGGATGMIGDPSFKASERSLNSAETVAAWVNALATQIQQLMTPHLTQPLV-MVN 123

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDFVE 186
           N  W+ SI  I   R+IG  FSVN M+  ESV+ RL R +Q +SF EF+Y +LQ+YDF +
Sbjct: 124 NADWMQSIGVIAFFRDIGKHFSVNAMIQRESVKQRLARPDQGISFTEFSYSLLQSYDFAQ 183

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + + C LQ+GG+DQWGNI+ GIDL  RL    +  LT PL+T + GTK GKT  GAIW
Sbjct: 184 LNQTHQCALQIGGNDQWGNIVSGIDLTRRLNGTTVHGLTLPLITKSDGTKFGKTEGGAIW 243

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIAT 304
           L+   TSPY F+Q+W N DDADV  F +  T L + +I+++      ++ +  A++I+A 
Sbjct: 244 LDAAKTSPYMFYQFWLNCDDADVYRFLRYYTFLSVEQIEQIEATDKAQVGKPSAQRILAE 303

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRGMGLLTLIVK 358
           E+T  VHG    E A   +   F   ++  ++  +       +   +++    ++TL+++
Sbjct: 304 EMTRFVHGHAGLESAQRISQALFSGQLNQLNLAELKQLEQDGLPCRQLAHVSDVVTLLLE 363

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            G A+S  +AR  L++ AI+IN    +  +  +            +  GKK   +  L 
Sbjct: 364 TGLASSKRQAREWLENGAIRINGERWN--EQTLAQTFALYDQYYIVQRGKKQFAMVKLA 420


>gi|116750003|ref|YP_846690.1| tyrosyl-tRNA synthetase [Syntrophobacter fumaroxidans MPOB]
 gi|116699067|gb|ABK18255.1| tyrosyl-tRNA synthetase [Syntrophobacter fumaroxidans MPOB]
          Length = 435

 Score =  458 bits (1178), Expect = e-127,   Method: Composition-based stats.
 Identities = 180/426 (42%), Positives = 253/426 (59%), Gaps = 23/426 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +   +L+ERGF+ Q S+   L     +   + YIG+D TA SLH G +  +M L  +Q+ 
Sbjct: 13  NVFDVLNERGFVAQASDVEALRERLGR-PTSCYIGFDPTADSLHIGSMVPIMALAHMQRC 71

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+P+ L+GGGT ++GDPS + E RRM+ +++I+ N++ +K   S F+++G GK  ALML
Sbjct: 72  GHRPLVLVGGGTGLVGDPSGKTEMRRMLTAEQIRGNVDALKAQLSRFLEFGDGK--ALML 129

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  ++YI+ LR+IG  FSVNRML+ ES + RL  E  L+F+EFNYM+LQAYDF  
Sbjct: 130 NNADWLLDLRYIEFLRDIGRHFSVNRMLAAESYKMRL--ETGLNFIEFNYMLLQAYDFYH 187

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           LA+ YDC LQMGG+DQWGNI+ GI+L  R    +  A+T PLLTTASG KMGKT +GA+W
Sbjct: 188 LAEEYDCVLQMGGNDQWGNIVAGIELIRRKSGREAHAITFPLLTTASGAKMGKTAAGAVW 247

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           L+   TSP++++QYW N DD DVV F K  T LP+ EI  +  LQG+E+N AK ++A E 
Sbjct: 248 LSASRTSPFDYYQYWINTDDRDVVRFLKLYTFLPLLEIAAVEGLQGQELNAAKTVLAYEA 307

Query: 307 TTMVHGREEAEKAATAAMECFDM-----------------SIHSQHMPTISISKDEVSRG 349
           T + HGRE A  A  AA   F                      +Q +PT  + +  +  G
Sbjct: 308 TLLTHGRENALAACEAASGVFGRRRLAPDLLPSSGIPRDVRDETQAVPTTDVERHRLEEG 367

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
           +    L  + G   S + ARR ++     +N+  +    L+I +      G I L  GKK
Sbjct: 368 IPAFELFAETGLCESRSAARRLIQQGGAYVNDMRLREFDLRIGVSHLRHDG-ILLKAGKK 426

Query: 410 NHIICH 415
                 
Sbjct: 427 KIHRVR 432


>gi|302346026|ref|YP_003814379.1| tyrosine--tRNA ligase [Prevotella melaninogenica ATCC 25845]
 gi|302150275|gb|ADK96537.1| tyrosine--tRNA ligase [Prevotella melaninogenica ATCC 25845]
          Length = 432

 Score =  458 bits (1178), Expect = e-126,   Method: Composition-based stats.
 Identities = 141/432 (32%), Positives = 224/432 (51%), Gaps = 27/432 (6%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
            +F+  L  RG + Q+    E   +  + +V+AY+G D TA SLH GHL  +M+L  LQ+
Sbjct: 2   KNFVEELRWRGMLAQMMPGTE--EMLQKEMVSAYLGTDPTADSLHIGHLCGIMMLRHLQR 59

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG-TGKTDAL 124
            GHKP  L+GG T +IGDPS + + R ++ ++ +  N E IK   S F+ +       A 
Sbjct: 60  CGHKPYLLVGGATGMIGDPSGKSQERNLLDTETLYHNQEAIKKQVSKFLDFDGNEPNKAE 119

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQAY 182
           M+NN  W+    ++D  R +G   +VN M++ +SV+ RL  E    LSF EF Y +LQ Y
Sbjct: 120 MVNNYDWMKDFTFLDFARLVGKHITVNYMMAKDSVKKRLSGESRDGLSFTEFTYQLLQGY 179

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKT 240
           DF+ L + +  +LQ+GG+DQWGN+  G +L  R      + + LT PL+T A G K GKT
Sbjct: 180 DFLYLFEKFGVKLQLGGNDQWGNMTTGTELIRRTLGNETETYCLTCPLITKADGKKFGKT 239

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEA 298
            SG IWL++  T+PY F+Q+W N+ D D   + K  T+L    ID + +   ++      
Sbjct: 240 ESGNIWLDRNRTTPYAFYQFWLNVSDDDAEKYIKIFTSLEKDVIDNLIEEHRQDPGRRTL 299

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKD 344
           +  +A E+T MVH +E+ + A  A+   F  S                 + +P   +SKD
Sbjct: 300 QYRLAEEVTRMVHSQEDLDMAIAASNILFGKSTKENLLQLDEQTFTDVFKDVPHYEVSKD 359

Query: 345 EVSRGMGLLTLIVKAG--FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNI 402
            +  G   + +  + G     S +E R+ +K   + +N   ++     I  +D      +
Sbjct: 360 VL--GQPAVDVFNQEGMQIFPSKSEMRKLVKGGGVALNKEKLAAFDQPITAEDLIDGKYL 417

Query: 403 KLSFGKKNHIIC 414
            +  GKKN+ + 
Sbjct: 418 LVQKGKKNYSLI 429


>gi|290968254|ref|ZP_06559797.1| tyrosine--tRNA ligase [Megasphaera genomosp. type_1 str. 28L]
 gi|290781736|gb|EFD94321.1| tyrosine--tRNA ligase [Megasphaera genomosp. type_1 str. 28L]
          Length = 418

 Score =  458 bits (1178), Expect = e-126,   Method: Composition-based stats.
 Identities = 146/424 (34%), Positives = 216/424 (50%), Gaps = 23/424 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L+ RG I+Q+++   L  L  +  ++ Y G D T  S+H GHL   M+L      
Sbjct: 2   NIIDELTWRGAINQMTDEAGLRKLTEEKKISLYCGVDPTGDSMHIGHLIPFMMLKRFAAA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P+ L+GGGT  IGDPS R   R++   +++Q N  K++  F+    +G        +
Sbjct: 62  GHHPVVLIGGGTGAIGDPSGRKTERQLQTMEKVQANAAKLRAQFAHL--FGEEDR-ITFV 118

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  I  +  LR+ G  FSVN ML+ + V SRL     +SF EF Y ILQ+ DF  
Sbjct: 119 NNADWLSKIDVLTFLRDYGKLFSVNVMLAKDVVASRLDA--GISFTEFTYQILQSMDFEH 176

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKLFALTSPLLTTASGTKMGKTLSGA 244
           L   Y  +LQ+GG+DQWGNI  G D   ++     + + LT PL+  A GTK GKT  GA
Sbjct: 177 LFSTYHVQLQIGGADQWGNITAGTDTIRKIHGSTAEAYGLTIPLMLKADGTKFGKTAGGA 236

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKII 302
           +WL+ E TSP+ F+Q+W N DDADVV + K  T L   EI+ +A+   KE     A++ +
Sbjct: 237 VWLDPEKTSPFEFYQFWLNQDDADVVKYLKYFTFLGQEEINALAEAVQKEPEKRAAQRRL 296

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGL 352
           A E+T  VH +E   +A       F  SI             +MPT+ +S  E      +
Sbjct: 297 AEEVTVFVHSKEALAEAQRITEALFHGSIEELSERELLQAFGNMPTVEVSATE----KDV 352

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           +  +V AG  TS  +AR  +   A+ IN   +   +  +          + +  GKK + 
Sbjct: 353 VNWLVDAGIYTSKRQAREDVAHGAVTINGVKVKQAEEIVYPHKNSHGKFVVVRKGKKKYT 412

Query: 413 ICHL 416
           +  +
Sbjct: 413 LAKI 416


>gi|284991447|ref|YP_003410001.1| tyrosyl-tRNA synthetase [Geodermatophilus obscurus DSM 43160]
 gi|284064692|gb|ADB75630.1| tyrosyl-tRNA synthetase [Geodermatophilus obscurus DSM 43160]
          Length = 424

 Score =  458 bits (1178), Expect = e-126,   Method: Composition-based stats.
 Identities = 139/422 (32%), Positives = 216/422 (51%), Gaps = 13/422 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +D +S L  RG I Q ++   L    S G V  Y G+D TA SLH GHL Q  +L  LQ+
Sbjct: 2   TDVISELHRRGLIAQSTDEDALRAHLSAGPVPYYAGFDPTAPSLHVGHLLQFTVLRALQR 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY---GTGKTD 122
            GH+P+ L+GG T +IGDP      R++     +   ++ I+   + F++      G   
Sbjct: 62  AGHRPVVLVGGATGLIGDPRP-TAERQLNDRGTVAGWVDSIRTQVAPFLEVPAEREGLEA 120

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
            + ++N  W   +  ID LRE+G  F V RML+ E+V +RL  E  +S+ EF+Y ILQA 
Sbjct: 121 PVYVDNLEWTAPLSAIDFLRELGKHFRVGRMLAKEAVAARLNSEAGISYTEFSYQILQAN 180

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           D+ EL + +   LQ GGSDQWGN+  GIDL  R +   + AL++PL+T + GTK GK+  
Sbjct: 181 DYRELYRRHGVTLQTGGSDQWGNLTAGIDLVRRTEGATVHALSTPLVTKSDGTKFGKSEG 240

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKK 300
           G +WL+  +T PY F+Q+W N DDAD  ++    +  P  E++      ++       ++
Sbjct: 241 GTVWLDPALTPPYAFFQFWLNADDADARAWLPLYSERPAEEVEALVAESVERPAARAVQR 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI------SISKDEVSRGMG-LL 353
            +A E+T +VHG +E  +A  A    F         P              V  G   + 
Sbjct: 301 ALAEELTRLVHGEDELRQAEAAGRALFGRDDLRALGPETLGAALREAGSVTVDGGTPTVA 360

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            L+ + G  +S +EARR +K     +NN  +++ +     +D+   G + L  GK++   
Sbjct: 361 ALLQQTGLVSSLSEARRTVKEGGAYLNNERVTDAEAVPGEEDWLPGGWLVLRRGKRSVAG 420

Query: 414 CH 415
             
Sbjct: 421 VQ 422


>gi|312897570|ref|ZP_07756987.1| tyrosyl-tRNA synthetase [Megasphaera micronuciformis F0359]
 gi|310621203|gb|EFQ04746.1| tyrosyl-tRNA synthetase [Megasphaera micronuciformis F0359]
          Length = 418

 Score =  458 bits (1178), Expect = e-126,   Method: Composition-based stats.
 Identities = 148/424 (34%), Positives = 227/424 (53%), Gaps = 23/424 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  LS RG ++Q+++   L  L  +  V+ Y G D T  S+H GHL   M+L   Q  
Sbjct: 2   NIIDELSWRGAVNQMTDEAGLRKLTQEKSVSLYCGVDPTGDSMHIGHLIPFMMLKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P  L+GGGT +IGDPS R   R++   ++I EN +K+K     F+      ++  ++
Sbjct: 62  GHHPYILIGGGTGVIGDPSGRKTERQLQTVEQIGENAKKLKTQ---FVHLFGEDSNITIV 118

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  +  +  LR+ G  FSVN ML+ + V SRL  E  +SF EF+Y ILQ+ DF  
Sbjct: 119 NNYDWLSKLDLLGFLRDYGKLFSVNVMLAKDVVASRL--EAGISFTEFSYQILQSVDFHH 176

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKL--FALTSPLLTTASGTKMGKTLSGA 244
           L K  D ++Q+GG+DQWGNI  GID+  +L+  +   + LT PL+  + GTK GKT  GA
Sbjct: 177 LLKERDVQIQIGGADQWGNITAGIDMIHKLEGSEQEAYGLTIPLMLKSDGTKFGKTAGGA 236

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKII 302
           IWL+ E TSP+ F+Q+W N DDADVV + K  T L   EI+ + K   +  E   A++ +
Sbjct: 237 IWLDPEKTSPFEFYQFWLNQDDADVVRYLKYFTFLGEEEIEELEKTVQEAPEKRLAQRRL 296

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGL 352
           A E+T  VHG E  ++A       +  SI              MPT+++  +E      +
Sbjct: 297 AEEVTIFVHGTEALKEAENITEALYRGSIADLTKRELEQAFGKMPTVTVGPEE----KAV 352

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           +  +V      S  +AR  +++ AI IN   +++ +  ++         I +  GKK + 
Sbjct: 353 VDWLVDTKICPSKRQAREDVQNGAITINGIKVTDLEEIVRPHKNSEGSYIIVRKGKKKYT 412

Query: 413 ICHL 416
           +  +
Sbjct: 413 LAKV 416


>gi|170016384|ref|YP_001727303.1| tyrosyl-tRNA synthetase [Leuconostoc citreum KM20]
 gi|254783614|sp|B1MW54|SYY_LEUCK RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|169803241|gb|ACA81859.1| Tyrosyl-tRNA synthetase [Leuconostoc citreum KM20]
          Length = 415

 Score =  457 bits (1177), Expect = e-126,   Method: Composition-based stats.
 Identities = 147/420 (35%), Positives = 219/420 (52%), Gaps = 17/420 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG ++QI++   L    + G V AY+G D TA SLH GHL   M+L   QK 
Sbjct: 2   NFIEDLKWRGALNQITDEAGLLEAMASGKVGAYVGTDPTADSLHLGHLIPFMVLKRFQKA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           G K + ++GG T  IGDP      R+++ S+++ EN + I    +       G  D  ++
Sbjct: 62  GGKAVIIIGGATGAIGDPRP-TTERQLLSSEQLAENEKGITAQVTKLF----GDNDTRIV 116

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  +   D LR+ G  FS+N ML  + V SRL  E  +SF EF Y +LQ  DF E
Sbjct: 117 NNNDWLGQLTLTDFLRDYGKLFSINVMLKKDVVASRL--ETGISFTEFTYQVLQGIDFHE 174

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKLFALTSPLLTTASGTKMGKTLSGA 244
           L +  D +LQ+GGSDQWGNI  GIDL   L+    K F LT PL+T ++G K GK+   A
Sbjct: 175 LWRREDVKLQIGGSDQWGNITSGIDLIHSLEGNEAKAFGLTIPLMTDSTGKKFGKSEGNA 234

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKII 302
           IWL+ + TSPY F+Q+W N  DADVV + K  T L   EID +A+       E  A++ +
Sbjct: 235 IWLDPKKTSPYTFYQFWLNQGDADVVKYLKYFTFLGSEEIDDLAEAVATNPGERLAQRRL 294

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS-----ISKDEVSRGM-GLLTLI 356
           A E+T  VHG    ++A   +   F  ++ +     I+     +   E +  +  ++  +
Sbjct: 295 AQEVTKFVHGESAVKEAEDLSTALFSGNVATLSAAQIADAFGGVPSFEAANTVKNIVDFL 354

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V  G   S  +AR  + + AI IN   +++   +I          + +  GKK + +  +
Sbjct: 355 VDGGVEASKRQAREDVANGAISINGEKVTDVAAEINPLSHYDGQFVLVRRGKKKYFLGKI 414


>gi|329944474|ref|ZP_08292639.1| tyrosine--tRNA ligase [Actinomyces sp. oral taxon 170 str. F0386]
 gi|328530239|gb|EGF57118.1| tyrosine--tRNA ligase [Actinomyces sp. oral taxon 170 str. F0386]
          Length = 420

 Score =  457 bits (1177), Expect = e-126,   Method: Composition-based stats.
 Identities = 145/417 (34%), Positives = 230/417 (55%), Gaps = 11/417 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +D L  L  RG I Q ++   L    + G VT Y G+D TA SLH GHL  + ++  LQ 
Sbjct: 2   TDILDELQWRGLIAQHTDIDALRAALTDGDVTFYCGFDPTAPSLHHGHLVAVKVMRHLQL 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH P++L+GG T +IGDP  + E R +     +      ++    + + + +G   A +
Sbjct: 62  AGHHPLALVGGATGLIGDPRAKGE-RSLNTKDVVAGWAVSLQEQLENLLDF-SGDNPARI 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  W  ++  ID LR++G  F +  MLS + V  RL  ++ +S+ EF+Y +LQA D++
Sbjct: 120 VNNLDWTQAMSAIDFLRDLGKHFRMGTMLSKDIVARRLASDEGISYTEFSYQVLQANDYL 179

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           EL + Y C L++GG+DQWGN++ G+DL  R++   +  +T+PL+T A GTK GK+  GAI
Sbjct: 180 ELYRRYGCTLEVGGNDQWGNLVGGMDLIHRVEGASVHVMTNPLITKADGTKFGKSEGGAI 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKKIIA 303
           WLN EM SPY F+Q+W  +DDADVV F K  T L   EI+R+  A  +  +  EA++++A
Sbjct: 240 WLNPEMLSPYAFYQFWLQVDDADVVRFLKVFTFLEREEIERLETATAENPKAREAQRVLA 299

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQ-HMPTISISKDEVSRG------MGLLTLI 356
            E+TT VHG E   +A  A    +     +     TI  +  +++ G        ++ L+
Sbjct: 300 HEVTTWVHGAEATAQAEAATSALWGRGDLAGIDEATILAATADLAAGDVVVGETTIVDLL 359

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
           + AG     N AR+ +      +NN  + +E   I  +   + G + +  G++N  I
Sbjct: 360 ISAGLERGRNAARKTIAGGGAYLNNVKVEDEATVISHEHMLAGGVVLVRKGRRNLAI 416


>gi|192360287|ref|YP_001981399.1| tyrosyl-tRNA synthetase [Cellvibrio japonicus Ueda107]
 gi|190686452|gb|ACE84130.1| tyrosyl-tRNA synthetase [Cellvibrio japonicus Ueda107]
          Length = 435

 Score =  457 bits (1177), Expect = e-126,   Method: Composition-based stats.
 Identities = 153/436 (35%), Positives = 235/436 (53%), Gaps = 20/436 (4%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M +  + FL  L ERG I Q++    L    + G  T Y G+D TA SLH GHL  L+ L
Sbjct: 1   MTSIDTHFLQELQERGLIAQMTGGDSLAEHLNTGSRTLYSGFDPTADSLHIGHLVPLLAL 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GHKPI+L+GG T ++GDPSF+ + R++     +   +++++   S FI +  G 
Sbjct: 61  KRFQMAGHKPIALVGGATGLVGDPSFKAQERKLNTPDVVAGWVQRLQQQVSRFIDFDCGP 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMIL 179
             A ++NN  W+ ++  +  LR++G  FSVN M++ ESV+ R++RE + +SF EF YM+L
Sbjct: 121 NSAEVVNNLDWVGNMNVLSFLRDVGKHFSVNNMINKESVKQRIEREGEGISFTEFTYMLL 180

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK 239
           Q+YDF EL +   C LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GK
Sbjct: 181 QSYDFAELYQRRQCTLQIGGSDQWGNITGGIDLTRRLHGGQVFGLTMPLVTKADGTKFGK 240

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE--INE 297
           T +G +WL+   TSPY F+Q+W    DADV  F +  T L + EI R+           +
Sbjct: 241 TETGTVWLDPVKTSPYAFYQFWLGAADADVYKFLRYFTFLHLDEIARIEAADVASGVKPQ 300

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFD-----------MSIHSQHMPTISISKDEV 346
           A++I+A ++T +VHG+   E A       F            + +    +PT  + + E 
Sbjct: 301 AQRILAEQMTELVHGKSGLEAAQRITQALFSDELSGLSESDFLQLQQDGLPTSRLVRAEF 360

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINN-SIISNEKLQIKL----QDFDSTGN 401
           +  + L+ L+ +A  ATS  + +  L+ +A+ IN  +    + + +              
Sbjct: 361 AS-VSLIQLLTEAQLATSGKQVKDALQRSAVFINGAAKGEADNMDVPGCFAWDTAFYERF 419

Query: 402 IKLSFGKKNHIICHLC 417
             +  GKK   +  + 
Sbjct: 420 YLVKLGKKKCHLFEVV 435


>gi|154488639|ref|ZP_02029488.1| hypothetical protein BIFADO_01946 [Bifidobacterium adolescentis
           L2-32]
 gi|154082776|gb|EDN81821.1| hypothetical protein BIFADO_01946 [Bifidobacterium adolescentis
           L2-32]
          Length = 435

 Score =  457 bits (1177), Expect = e-126,   Method: Composition-based stats.
 Identities = 135/421 (32%), Positives = 217/421 (51%), Gaps = 15/421 (3%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L  RG I Q ++   L    +   ++ Y G+D TA+SLH G+L QL+ +  LQ  G
Sbjct: 15  VLDELEWRGLISQSTDRDRLAEALNGDPISYYCGFDPTAASLHIGNLVQLINMRHLQAAG 74

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H PI+L+GG T +IGDP    E R +     +    E++K      ++   G      ++
Sbjct: 75  HHPIALVGGATGLIGDPRQSGE-RTLNPKDVVAGWAERLKAQIGGILEV-EGSNPVRFVS 132

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W  S+  ID LR++G  F +  ML+ ++V  RL  E  +SF EF+Y +LQ  DF+ L
Sbjct: 133 NYDWTASMNVIDFLRDVGKNFRLGTMLAKDTVARRLNSEDGISFTEFSYQVLQGNDFLHL 192

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
              Y C L++GGSDQWGN+  G+DL  +++   +   TSP++T A G K GK+   A+WL
Sbjct: 193 FDEYHCVLELGGSDQWGNLTSGLDLIHKVRGVDVNVFTSPIITDAQGKKFGKSEGNAVWL 252

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIATE 305
           +  M SPY F+Q+W N  D+++ +  K  T LP +EI+R+ +         EA++ +A E
Sbjct: 253 DGTMLSPYKFYQFWFNRPDSEMENLLKVFTFLPKAEIERLVEESKTNPGAREAQRTLAWE 312

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISK-----------DEVSRGMGLLT 354
           +T++VHG E   +A  AA   F        +   ++              + + G  +  
Sbjct: 313 VTSLVHGEEATRQAIEAAGALFGRGGDLAGVDESTLEAALDGVKIDGEFAKAAVGDRVAE 372

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
             +KAG   S +EAR+ +K+  + +NN+ + +E+  +   DF       +  GKK   + 
Sbjct: 373 AGMKAGLFKSISEARKTIKAGGVYLNNARVEDEEQVLNENDFLHGRFALIRRGKKALGVV 432

Query: 415 H 415
            
Sbjct: 433 E 433


>gi|307564822|ref|ZP_07627350.1| tyrosine--tRNA ligase [Prevotella amnii CRIS 21A-A]
 gi|307346544|gb|EFN91853.1| tyrosine--tRNA ligase [Prevotella amnii CRIS 21A-A]
          Length = 432

 Score =  457 bits (1177), Expect = e-126,   Method: Composition-based stats.
 Identities = 142/432 (32%), Positives = 223/432 (51%), Gaps = 27/432 (6%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
            +F+  L  RG + Q+    E      + +V+AY+G D TA SLH GHL  +M+L  LQ+
Sbjct: 2   KNFVEELRWRGMLAQMMPGTE--EFLMKEMVSAYLGTDPTADSLHIGHLCGIMMLRHLQR 59

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG-TGKTDAL 124
            GHKP  L+GG T +IGDPS + + R ++ +  +  N E IK   S F+ +  T    A 
Sbjct: 60  CGHKPYLLVGGATGMIGDPSGKSQERNLLDADTLYHNQEAIKKQVSKFLDFDSTEPNKAE 119

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQAY 182
           M+NN  W+    ++D  R +G   +VN M++ +SV+ RL  E    LSF EF Y +LQ Y
Sbjct: 120 MVNNYDWMKDFTFLDFARTVGKHITVNYMMAKDSVKRRLNGEASDGLSFTEFTYQLLQGY 179

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKLFALTSPLLTTASGTKMGKT 240
           DF+   ++Y  +LQ+GG+DQWGN+  G +L  R      + + LT PL+T A G K GKT
Sbjct: 180 DFLYQYQHYGIKLQLGGNDQWGNMTTGSELIRRTLGSEAEAYCLTCPLITKADGKKFGKT 239

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEA 298
            SG IWL++  T+PY F+Q+W N+ D D   + K  T+L  + I+ + +    +      
Sbjct: 240 ESGNIWLDRNRTTPYAFYQFWLNVSDDDAAKYIKIFTSLDQTTIEALIEEHSADPGRRIL 299

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKD 344
           +  +A E+T MVH +E+ + A  A+   F  S                 + +P   ISKD
Sbjct: 300 QHRLAEEVTRMVHSQEDLDMAIAASNILFGKSTKENLLQLDEQTFTDVFKDVPHYEISKD 359

Query: 345 EVSRGMGLLTLIVKAG--FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNI 402
            +  G   + ++ + G     S +E R+ +K   + +N   ++     I   D      +
Sbjct: 360 VL--GQPAVEVMNQEGMNIFPSKSEMRKLVKGGGVALNKEKLTAFDQVITANDLIDGKYL 417

Query: 403 KLSFGKKNHIIC 414
            +  GKKN+ + 
Sbjct: 418 LVQKGKKNYSLI 429


>gi|90962338|ref|YP_536254.1| tyrosyl-tRNA synthetase [Lactobacillus salivarius UCC118]
 gi|227891593|ref|ZP_04009398.1| tyrosyl-tRNA synthetase [Lactobacillus salivarius ATCC 11741]
 gi|301300696|ref|ZP_07206882.1| tyrosine--tRNA ligase [Lactobacillus salivarius ACS-116-V-Col5a]
 gi|123391329|sp|Q1WSF8|SYY_LACS1 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|90821532|gb|ABE00171.1| Tyrosyl-tRNA synthetase [Lactobacillus salivarius UCC118]
 gi|227866740|gb|EEJ74161.1| tyrosyl-tRNA synthetase [Lactobacillus salivarius ATCC 11741]
 gi|300214988|gb|ADJ79404.1| Tyrosyl-tRNA synthetase (Tyrosine--tRNA ligase) (TyrRS)
           [Lactobacillus salivarius CECT 5713]
 gi|300851701|gb|EFK79399.1| tyrosine--tRNA ligase [Lactobacillus salivarius ACS-116-V-Col5a]
          Length = 416

 Score =  457 bits (1177), Expect = e-126,   Method: Composition-based stats.
 Identities = 147/424 (34%), Positives = 220/424 (51%), Gaps = 24/424 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + L  L+ RG I+Q+S+   L  L  +  V  Y G D T  SLH GHL   M+L   Q+ 
Sbjct: 2   NILDELAWRGAINQVSDEEGLRKLLDKKSVGLYCGVDPTGDSLHIGHLIPFMMLKRFQEA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+   ++GGGT  IGDPS +   R +   +++  N E +        K+  GK +  ++
Sbjct: 62  GHRAHIIIGGGTGSIGDPSGKKSERVLQTMEQVHHNEEALTKQM----KHLFGKDNITIV 117

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  I  +  LR+ G  F+VN ML+ E V SRL  E  +SF EF Y ILQ+ DF  
Sbjct: 118 NNRDWLSKIDLLGFLRDYGKLFNVNTMLNKEVVASRL--EVGISFTEFTYQILQSIDFHH 175

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKLFALTSPLLTTASGTKMGKTLSGA 244
           L KN D +LQ+GG+DQWGNI  GIDL  +++    + +ALT PL+  A GTK GKT  GA
Sbjct: 176 LWKNNDVQLQIGGADQWGNITSGIDLIHKMEGSEAEAYALTIPLMLKADGTKFGKTAGGA 235

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKII 302
           +WL+ E T+PY F+Q+W N DD DV+ + K  T L   EI           E  EA++ +
Sbjct: 236 VWLDPEKTTPYEFYQFWLNQDDRDVIKYLKYFTFLSQEEIADLEEKVKTQPEKREAQRRL 295

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGL 352
           A E    VHG+E  ++A   +   F   +            ++MP++ ++    +    +
Sbjct: 296 AEETVEFVHGKEAVKEAEHISAALFSGEVKDLTASEIEQGFKNMPSVEVT----AEPKNI 351

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           +  +V  G  +S  +AR  + + AI+IN   I + +  I          + +  GKK + 
Sbjct: 352 VEWLVDTGIESSKRQAREDVTNGAIRINGDRIQDLEFTIDPSAEFDGKFVIVRRGKKKYF 411

Query: 413 ICHL 416
           +  +
Sbjct: 412 LARV 415


>gi|189502000|ref|YP_001957717.1| hypothetical protein Aasi_0587 [Candidatus Amoebophilus asiaticus
           5a2]
 gi|259516964|sp|B3ERY6|SYY_AMOA5 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|189497441|gb|ACE05988.1| hypothetical protein Aasi_0587 [Candidatus Amoebophilus asiaticus
           5a2]
          Length = 427

 Score =  457 bits (1176), Expect = e-126,   Method: Composition-based stats.
 Identities = 149/430 (34%), Positives = 227/430 (52%), Gaps = 24/430 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           DF++ L  RG IH I+    L+    + ++T YIG+D TA SLH G+L  +MLL   Q  
Sbjct: 3   DFIANLRWRGMIHDITP--GLEAQLQKEMITGYIGFDPTAPSLHVGNLATIMLLKHFQLA 60

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKPI+++GG T +IGDPSF+   R+ +  +E+  N   I      F+ + +    A +L
Sbjct: 61  GHKPIAVVGGATGMIGDPSFKSTERKFLSEEELLHNQSCIMKQLKCFLDFSSSANTAELL 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W     ++  LRE+G   S+N M++ ESV+ RL  E  +SF EF+Y +LQ YDF  
Sbjct: 121 NNIDWFKDFGFLRFLREVGKHISINYMMAKESVKRRL--EDGISFTEFSYQLLQGYDFYY 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L      +LQMGG+DQWGN+  GI+L  R    + FALT+PL+T A GTK GK+  G IW
Sbjct: 179 LYNTKGVKLQMGGADQWGNLTTGIELIRRKTGEEAFALTAPLITKADGTKFGKSEQGNIW 238

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIAT 304
           L+  MTSPY F+Q+W N  D D     K  T L   EID + +L  +  ++   +K IA 
Sbjct: 239 LDSTMTSPYEFYQFWLNCTDEDACRLIKVFTLLSKEEIDNLIELHVQAPHQRILQKQIAK 298

Query: 305 EITTMVHGREEAEKAATAAMECF--------------DMSIHSQHMPTISISKDEVSRGM 350
           E+T  VH   +  +A   +   F              D  +  + +P + I+  +++   
Sbjct: 299 ELTIRVHSETDYMQARKTSELLFGHATAEDLWELSEKDFKVIFKSIPEVHITLTQLTEAE 358

Query: 351 GLLTLIVKAGF---ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFG 407
            +L L+   GF     S  E RR ++  ++ +N   I++   +  L+       + +  G
Sbjct: 359 HMLDLVASTGFGIMFNSKGEVRRAIQEGSLSVNKEKITDPLQKPNLK-LLQDKYLLVQRG 417

Query: 408 KKNHIICHLC 417
           KK+H +  + 
Sbjct: 418 KKHHYLIKVS 427


>gi|256394598|ref|YP_003116162.1| tyrosyl-tRNA synthetase [Catenulispora acidiphila DSM 44928]
 gi|256360824|gb|ACU74321.1| tyrosyl-tRNA synthetase [Catenulispora acidiphila DSM 44928]
          Length = 420

 Score =  457 bits (1176), Expect = e-126,   Method: Composition-based stats.
 Identities = 136/419 (32%), Positives = 219/419 (52%), Gaps = 10/419 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +D +  L   G +   ++   L    + G V  Y+G+D TA SLH G+L Q++    LQ+
Sbjct: 2   TDIVDDLKWHGLLALSTDEDALRKAFADGPVIFYVGFDPTAPSLHFGNLVQMIAARRLQE 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH P+ L+GG T +IGDP   +  R +   + + E + +I+   S FI +  G   A +
Sbjct: 62  AGHTPLILIGGSTGLIGDPKP-NAERTLNSKETVAEWVVRIRDQVSRFISF-EGPNAARV 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  W   +  ID LR+IG  F V +MLS ++V +RL  E  +S+ EF+Y +LQ  D++
Sbjct: 120 VNNLDWTAPMSAIDFLRDIGKHFRVGKMLSKDAVSARLNSEAGISYTEFSYQVLQGMDYL 179

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           EL + Y C LQ GGSDQWGNI  G+DL  + +   + AL +PLL  A GTK GKT SG +
Sbjct: 180 ELYRQYGCTLQTGGSDQWGNITAGVDLIHKAEGVSVHALATPLLLKADGTKFGKTESGTV 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIA 303
           WL+ ++ +PY F+Q++ N +DA V+S+ K  +     EI+ + +  ++  ++  A+K +A
Sbjct: 240 WLSGDLMTPYAFYQFFLNSEDAMVISYLKVFSFRSREEIEELERLTMEKPQMRAAQKALA 299

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQ-HMPTI-----SISKDEVSRGMGLLTLIV 357
            E+TT+VHG E   +   A+   F     ++   PT+      +   + +  + +  L+ 
Sbjct: 300 EEVTTLVHGAEATAQVIAASKALFGQGDLTELDEPTLRAALSELPGTKTAELVPVAQLLA 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             G   S    RR +      +NN  I  E      +D      + L  GK+      +
Sbjct: 360 DTGLVVSRGAGRRTINEGGAYVNNRKIEAEDEAPTKEDLLHGRWLVLRRGKRTLGAVEV 418


>gi|94676968|ref|YP_588559.1| tyrosyl-tRNA synthetase [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
 gi|94220118|gb|ABF14277.1| tyrosyl-tRNA synthetase [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
          Length = 424

 Score =  457 bits (1176), Expect = e-126,   Method: Composition-based stats.
 Identities = 147/419 (35%), Positives = 220/419 (52%), Gaps = 9/419 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ER  I  I++ + L    ++G ++ Y G+D T  SLH GHL  L+ L   Q 
Sbjct: 4   SNLIQQLQERDLIANITDEKGLAKRLNEGTISIYCGFDPTNDSLHVGHLLPLLCLKRFQL 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+PI L+GG TS+IGDPSF+   R++  +       EKIK   S F+ +      A++
Sbjct: 64  AGHRPIILIGGATSLIGDPSFKLTERKLNPTYTTNLWSEKIKKNLSLFLDFNKSNNSAII 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDF 184
           +NN  W  S+  +  LRE+G  FS+N+M++ E+++ RL R E  +SF EF+Y +LQ YDF
Sbjct: 124 VNNYDWFRSMNILTFLREVGKNFSINQMINKEAIKLRLNRNESGISFAEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L++ Y   LQ+GGSDQWGNI+ GIDL  ++    ++ LT PLLT + GTK GKT    
Sbjct: 184 TYLSQKYGVILQIGGSDQWGNILSGIDLTRKIYQQTIYGLTIPLLTKSDGTKFGKTEDNV 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKII 302
           IWL+ + TSPY  +Q+W N  D DV  F K  T + ++EI  + K     +    A+ I+
Sbjct: 244 IWLDPKKTSPYQLYQFWLNTTDYDVYRFLKFFTFMSLAEITAIEKQNNMSENRQRAQYIL 303

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQ------HMPTISISKDEVSRGMGLLTLI 356
           A  +T M+HG +    A       F              +    I    +++ + L   +
Sbjct: 304 AEYMTRMIHGNQGLAAAQRITTSLFTGLFKHLTENDFIQLAQDGIPMVNLTQNVDLPQAL 363

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           V A  A S  +AR+ + SNAI IN    ++        D        L  GKK + + +
Sbjct: 364 VAASLAPSYGQARKMIISNAIAINGKKQASINYVFSQADRLHQRYTILQRGKKKYCLLY 422


>gi|306822645|ref|ZP_07456023.1| tyrosine--tRNA ligase [Bifidobacterium dentium ATCC 27679]
 gi|309800858|ref|ZP_07694990.1| tyrosine--tRNA ligase [Bifidobacterium dentium JCVIHMP022]
 gi|304554190|gb|EFM42099.1| tyrosine--tRNA ligase [Bifidobacterium dentium ATCC 27679]
 gi|308222394|gb|EFO78674.1| tyrosine--tRNA ligase [Bifidobacterium dentium JCVIHMP022]
          Length = 440

 Score =  457 bits (1176), Expect = e-126,   Method: Composition-based stats.
 Identities = 138/420 (32%), Positives = 215/420 (51%), Gaps = 20/420 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L  RG I Q ++   L    +   V+ Y G+D TA+SLH G+L QL+ +  LQ  G
Sbjct: 15  VLDELEWRGLISQSTDRDRLAEALNGEPVSYYCGFDPTAASLHIGNLVQLINMRHLQAAG 74

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H PI+L+GG T +IGDP    E R +     +    E++K      ++   G      ++
Sbjct: 75  HHPIALVGGATGLIGDPRQSGE-RTLNPKDVVAGWAERLKKQIGGILE-TDGDNPVRFVS 132

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W  S+  ID LR++G  F +  ML+ ++V  RL  E+ +SF EF+Y +LQ  DF+ L
Sbjct: 133 NYDWTASMTVIDFLRDVGKNFRLGTMLAKDTVARRLNSEEGISFTEFSYQVLQGNDFLHL 192

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
              Y C L++GGSDQWGN+  G+DL  +++   +   TSP++T A G K GK+   A+WL
Sbjct: 193 FDEYHCILEIGGSDQWGNLTSGLDLIHKVRGVDVNVFTSPIITDAQGKKFGKSEGNAVWL 252

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIATE 305
           +  M SPY F+Q+W N  D ++ S  K  T LP +EI+R+ K         EA++ +A E
Sbjct: 253 DATMLSPYKFYQFWFNRPDVEMESLLKAFTFLPKAEIERLVKESETNPGAREAQRTLAWE 312

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISK----------------DEVSRG 349
           +T++VHG E   +A  AA   F        +   ++                     + G
Sbjct: 313 VTSLVHGEEATNQAIEAAGALFGRGGDLSSIDEATLEAAIEGLKVEDGYGEKIFAPAAVG 372

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
             +    +KAG   S +EAR+ +KS  + +NN  + +++  +  +DF       +  GKK
Sbjct: 373 DRVAEAGMKAGLFKSISEARKTIKSGGVYLNNVRVDDQEQTLGEEDFLHGRFALIRRGKK 432


>gi|191638956|ref|YP_001988122.1| Tyrosyl-tRNA synthetase (Tyrosine--tRNA ligase) (TyrRS)
           [Lactobacillus casei BL23]
 gi|239629885|ref|ZP_04672916.1| tyrosyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei
           8700:2]
 gi|190713258|emb|CAQ67264.1| Tyrosyl-tRNA synthetase (Tyrosine--tRNA ligase) (TyrRS)
           [Lactobacillus casei BL23]
 gi|239527497|gb|EEQ66498.1| tyrosyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei
           8700:2]
 gi|327383006|gb|AEA54482.1| Tyrosyl-tRNA synthetase [Lactobacillus casei LC2W]
 gi|327386192|gb|AEA57666.1| Tyrosyl-tRNA synthetase [Lactobacillus casei BD-II]
          Length = 424

 Score =  456 bits (1175), Expect = e-126,   Method: Composition-based stats.
 Identities = 143/423 (33%), Positives = 215/423 (50%), Gaps = 23/423 (5%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L  RG ++Q+++   L  L  +  V+ Y G D T  SLH GHL   M+L   Q  G
Sbjct: 7   ILDELKWRGALNQLTDEDGLRKLTEEKAVSVYCGTDPTGDSLHVGHLIPFMILKRFQLLG 66

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+P+ ++GGGT  IGDPS R+  R +     I  N +K+     +      G  D  +++
Sbjct: 67  HRPVIVIGGGTGSIGDPSGRNSERVLQTMDTIAANKKKLTAQMENLF----GTDDFRIVD 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  +  +D LR+ G  FSVN ML+ E V SRL  E  +S+ EF Y ILQ+ DF+ L
Sbjct: 123 NYDWLSKLSMLDFLRDYGKLFSVNSMLNKEVVASRL--ENGISYTEFTYQILQSVDFLHL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK--LFALTSPLLTTASGTKMGKTLSGAI 245
            K+ D +LQ+GG+DQWGNI  GIDL  R++ P+   + LT+PL+  A GTK GK+  GA+
Sbjct: 181 FKHEDVQLQIGGADQWGNITAGIDLIHRIEGPEARAYGLTNPLMLKADGTKFGKSAGGAV 240

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIA 303
           WL+ E TSPY F+Q+W N DDADV  F K  T L    I  + +      E  EA++ +A
Sbjct: 241 WLDPEKTSPYEFYQFWFNQDDADVEKFLKFFTFLSRDAIAELVEATKTHPEKREAQRELA 300

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLL 353
             +T  VHG++  ++A   +   F   +            +  PT+   +   +    L+
Sbjct: 301 RAVTKFVHGQKAVDQAENISAALFSGDVAELSADDIKQGFKQFPTVEAPETAENIVTWLV 360

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
                     S  +AR  +++ AI IN +       ++          + +  GKK + +
Sbjct: 361 D---TTKIEPSRRQAREDIQNGAITINGTRQRELDFEVDPSTHFDGQYVIVRRGKKRYFL 417

Query: 414 CHL 416
             +
Sbjct: 418 VDI 420


>gi|225453040|ref|XP_002265238.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 483

 Score =  456 bits (1175), Expect = e-126,   Method: Composition-based stats.
 Identities = 154/434 (35%), Positives = 236/434 (54%), Gaps = 19/434 (4%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           +P  +S+ + IL +RG +  I++P  L    S   +  Y G+D TA SLH G+L  L++L
Sbjct: 52  IPLHRSNVIEILEQRGLVDSITSP-ILRASSSTQTLKVYCGFDPTAESLHLGNLLGLIVL 110

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT-- 118
            W ++ GHK ++L+GG T+ IGDPS +   R  +  + +++N   I    +S +   T  
Sbjct: 111 SWFRRCGHKAVALIGGATARIGDPSGKSLERPELNLEALEKNTIGITNTITSILNRSTTN 170

Query: 119 -GKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYM 177
            G    ++LNN  W      +D L+++G +  V  M++ ESV+ RL+ EQ +S+ EF Y 
Sbjct: 171 GGDDSFVVLNNYDWWKEFTLLDFLKKVGRYARVGTMMAKESVKKRLESEQGMSYTEFTYQ 230

Query: 178 ILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK-LFALTSPLLTTASGTK 236
           +LQ YDF+ L +N    +Q GGSDQWGNI  G +L  ++      + LT PLL  + GTK
Sbjct: 231 LLQGYDFLYLFENEGVSVQFGGSDQWGNITAGTELIRKILQTDGAYGLTFPLLLKSDGTK 290

Query: 237 MGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE-- 294
            GK+  GAIWL+  M SPY F+QY+ ++ DADVV F K LT L M EI  +         
Sbjct: 291 FGKSEDGAIWLSPAMLSPYKFYQYFFSVPDADVVRFLKILTFLDMDEIMELEVKMRSPSY 350

Query: 295 -INEAKKIIATEITTMVHGREEAEKAATAAMECFDMSI----------HSQHMPTISISK 343
             N A++ +A E T  VHG+E  ++A  A       +            ++ +P+ S+S 
Sbjct: 351 VPNTAQRRLAEEATRFVHGQEGLDEALKATEALRPGAETKLDWKTIEGIAKDVPSCSLSY 410

Query: 344 DEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
           DEV   + LL L +  G   S + ARR LK   + +NN+ I +E  +I+ +D      + 
Sbjct: 411 DEV-LNLSLLDLSISTGLLESKSAARRLLKQGGLYLNNNRIDSEAKRIEAEDIVDGKVLL 469

Query: 404 LSFGKKNHIICHLC 417
           LS GKKN ++  + 
Sbjct: 470 LSAGKKNKVVVRIS 483


>gi|116495494|ref|YP_807228.1| tyrosyl-tRNA synthetase [Lactobacillus casei ATCC 334]
 gi|116105644|gb|ABJ70786.1| tyrosyl-tRNA synthetase [Lactobacillus casei ATCC 334]
          Length = 424

 Score =  456 bits (1174), Expect = e-126,   Method: Composition-based stats.
 Identities = 143/423 (33%), Positives = 215/423 (50%), Gaps = 23/423 (5%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L  RG ++Q+++   L  L  +  V+ Y G D T  SLH GHL   M+L   Q  G
Sbjct: 7   ILDELKWRGALNQLTDEDGLRKLTEEKAVSVYCGTDPTGDSLHVGHLIPFMILKRFQLLG 66

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+P+ ++GGGT  IGDPS R+  R +     I  N +K+     +      G  D  +++
Sbjct: 67  HRPVIVIGGGTGSIGDPSGRNSERVLQTMDTIAANKKKLTAQMENLF----GTDDFRIVD 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  +  +D LR+ G  FSVN ML+ E V SRL  E  +S+ EF Y ILQ+ DF+ L
Sbjct: 123 NYDWLSKLSMLDFLRDYGKLFSVNSMLNKEVVASRL--ENGISYTEFTYQILQSVDFLHL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK--LFALTSPLLTTASGTKMGKTLSGAI 245
            K+ D +LQ+GG+DQWGNI  GIDL  R++ P+   + LT+PL+  A GTK GK+  GA+
Sbjct: 181 FKHEDVQLQIGGADQWGNITAGIDLIHRIEGPEARAYGLTNPLMLKADGTKFGKSAGGAV 240

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIA 303
           WL+ E TSPY F+Q+W N DDADV  F K  T L    I  + +      E  EA++ +A
Sbjct: 241 WLDPEKTSPYEFYQFWFNQDDADVEKFLKFFTFLSRDAIAELVEATKTHPEKREAQRELA 300

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLL 353
             +T  VHG++  ++A   +   F   +            +  PT+   +   +    L+
Sbjct: 301 RAVTKFVHGQKAVDQAENISDALFSGDVAELSADDIKQGFKQFPTVEAPETAENIVTWLV 360

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
                     S  +AR  +++ AI IN +       ++          + +  GKK + +
Sbjct: 361 D---TTKIEPSRRQAREDIQNGAITINGTRQRELDFEVDPSTHFDGQYVIVRRGKKRYFL 417

Query: 414 CHL 416
             +
Sbjct: 418 VDI 420


>gi|257067000|ref|YP_003153256.1| tyrosyl-tRNA synthetase [Anaerococcus prevotii DSM 20548]
 gi|256798880|gb|ACV29535.1| tyrosyl-tRNA synthetase [Anaerococcus prevotii DSM 20548]
          Length = 416

 Score =  456 bits (1174), Expect = e-126,   Method: Composition-based stats.
 Identities = 159/411 (38%), Positives = 249/411 (60%), Gaps = 7/411 (1%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L +RG+  Q +N  EL  L  +  V  Y G+D TA SL  GHL Q+M++  +Q  
Sbjct: 11  NVFDELVDRGYYEQATNEEELKKLLKEESVKFYCGFDATADSLTVGHLIQIMVMMRMQNY 70

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+P++L+GGGT++IGDPS R + R++M  + I  N E     F  F+ +  G   A ML
Sbjct: 71  GHRPVALLGGGTTLIGDPSGRSDMRKVMTEEMIDHNAECFYNQFQRFLDFSEG--GATML 128

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN+ WL  + +++ LR++GS F VN M+  ++ ++R+     L+F EF+YM+LQ+YDF++
Sbjct: 129 NNKDWLLDLNFVEFLRDVGSEFLVNEMIKKDAYKNRMAAG-GLTFFEFSYMLLQSYDFLK 187

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           + +    +L+MGGSDQW NII G+DL ++ +  + + +T  LLTTA G KMGK+  GA+W
Sbjct: 188 MYREDGVKLEMGGSDQWSNIIGGVDLIKKHENGQAYGMTFSLLTTADGVKMGKSQKGAVW 247

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR-MAKLQGKEINEAKKIIATE 305
           L+++ TSPY  +QY RN+DD DV  F  +LT LP  E  +  +     EIN+AK+I+A E
Sbjct: 248 LDEKKTSPYEMYQYMRNVDDRDVEKFLLQLTFLPTEECRKLGSAKDAAEINKAKEILAYE 307

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           +  +VHG+E+A++A  AA   F        MPT  I+K ++ +G+ +  L+ + G   S 
Sbjct: 308 VVKLVHGKEKADEAIAAAKALFTGKGDESAMPTTQIAKSDLPKGLLI--LMTETGLTKSN 365

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            EARR +K   + IN+  +++  +++  +D    G I +  GKKN     L
Sbjct: 366 GEARRIIKQGGVSINDEKVADPSIEVT-EDLFEDGRIIIKKGKKNFHKVEL 415


>gi|58039808|ref|YP_191772.1| tyrosyl-tRNA synthetase [Gluconobacter oxydans 621H]
 gi|81351902|sp|Q5FR80|SYY_GLUOX RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|58002222|gb|AAW61116.1| Tyrosyl-tRNA synthetase [Gluconobacter oxydans 621H]
          Length = 416

 Score =  456 bits (1174), Expect = e-126,   Method: Composition-based stats.
 Identities = 192/417 (46%), Positives = 263/417 (63%), Gaps = 5/417 (1%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           MP  KS FL     RG I Q ++   LD     G +TAY+G+D TA SLH G+   +M L
Sbjct: 1   MP--KSPFLLEAQARGLIFQCTDLDALDEAMLAGPITAYVGFDPTADSLHVGNALTIMAL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             LQK GH+PI+LMGGGT+ IGDPSFRDE+R ++ ++ I  NI  I+     FI +    
Sbjct: 59  RLLQKHGHRPIALMGGGTAKIGDPSFRDEARSLITNETIAHNIAGIEKSLRQFITFSDED 118

Query: 121 TD--ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMI 178
               A++ NN  WL  + YI+LL+++G  FSV+RML F+SVR RL+REQ L+FLEFNY I
Sbjct: 119 PSSGAILANNADWLDKLSYINLLQDVGVHFSVSRMLGFDSVRQRLEREQGLTFLEFNYSI 178

Query: 179 LQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMG 238
           LQ+YDF EL + +   LQMGGSDQWGNI+ GIDL  R    ++F LT+PL+TT+SG KMG
Sbjct: 179 LQSYDFRELNRRHGAVLQMGGSDQWGNIVSGIDLTRRTDGKQIFGLTTPLVTTSSGAKMG 238

Query: 239 KTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEA 298
           K+  GA W+  E    + +WQ+WRN +DADV  F K  T LP+ E +R+  L+G EINEA
Sbjct: 239 KSAKGATWVRPEKLPVFEYWQFWRNTEDADVGRFLKFFTDLPVEECERLGALEGSEINEA 298

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVK 358
           KKI+ATE T + HGR  AE+AA  A   F+       +P I +  + ++ G+    +  +
Sbjct: 299 KKILATEATAICHGRGAAEEAAETARRVFEQGSAQAALPEIDLPANLIAEGLPAFRVFQE 358

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           AG A S  EARR ++    ++N+ ++S+E     L D    G +K+S+GKK HI+  
Sbjct: 359 AGLAASGGEARRLIRGGGGRVNDVVVSDENQTFTLDDL-RDGVLKVSYGKKKHILLR 414


>gi|323343530|ref|ZP_08083757.1| tyrosine--tRNA ligase [Prevotella oralis ATCC 33269]
 gi|323095349|gb|EFZ37923.1| tyrosine--tRNA ligase [Prevotella oralis ATCC 33269]
          Length = 433

 Score =  456 bits (1174), Expect = e-126,   Method: Composition-based stats.
 Identities = 142/434 (32%), Positives = 222/434 (51%), Gaps = 27/434 (6%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
            +F+  L  RG + Q+    E      +G+ +AY+G D TA SLH GHL  +M+L  LQ+
Sbjct: 3   KNFVEELKWRGMLAQMMPGTE--EFLQKGMASAYLGTDPTADSLHIGHLCGIMMLRHLQR 60

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG-TGKTDAL 124
            GHKP  L+GG T +IGDPS + + R ++ +  +  N E IK   + F+ +   G   A 
Sbjct: 61  CGHKPFILVGGATGMIGDPSGKSQERNLLDADTLYHNQEAIKAQVAKFLDFEAEGDNAAE 120

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQAY 182
           M+NN  W+    ++D  RE+G   +VN M++ +SV+ RL  E    LSF EF Y +LQ Y
Sbjct: 121 MVNNYDWIKEFTFLDFAREVGKHITVNYMMAKDSVQKRLNGEARDGLSFTEFTYQLLQGY 180

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL--KTPKLFALTSPLLTTASGTKMGKT 240
           DF+ L + Y  +LQ+GG+DQWGN+  G +L  R      + + LT PL+T A G K GKT
Sbjct: 181 DFLYLYRKYGVKLQLGGNDQWGNMTTGTELIHRTLGNDTEAYCLTCPLITKADGKKFGKT 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEA 298
            SG IWL++  T+PY F+Q+W N+ D D   + K  T+L    ID +     ++      
Sbjct: 241 ESGNIWLDRNRTTPYKFYQFWLNVSDDDAEKYIKIFTSLEKEVIDALIVEHRQDPGRRVL 300

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKD 344
           +K +A E+T MVH +E+ + A  A+   F  S                   +P   I ++
Sbjct: 301 QKRLAEEVTAMVHSKEDLDMAVEASNILFGKSTKESLLKLDEATLLDIFDGVPHYIIERE 360

Query: 345 EVSRGMGLLTLIVKAG--FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNI 402
           ++  G   + +    G     S ++ R+ +K   + +N   ++     I   D      I
Sbjct: 361 QL--GQQAVDIFTLEGMDIFQSKSDMRKLVKGGGVSVNKEKLTAFDSTISDADLIDGKYI 418

Query: 403 KLSFGKKNHIICHL 416
            +  GKKN+ +  +
Sbjct: 419 LVQKGKKNYFLITV 432


>gi|171742786|ref|ZP_02918593.1| hypothetical protein BIFDEN_01900 [Bifidobacterium dentium ATCC
           27678]
 gi|283456163|ref|YP_003360727.1| tyrosyl-tRNA synthetase [Bifidobacterium dentium Bd1]
 gi|171278400|gb|EDT46061.1| hypothetical protein BIFDEN_01900 [Bifidobacterium dentium ATCC
           27678]
 gi|283102797|gb|ADB09903.1| tyrS Tyrosyl-tRNA synthetase [Bifidobacterium dentium Bd1]
          Length = 440

 Score =  456 bits (1174), Expect = e-126,   Method: Composition-based stats.
 Identities = 138/420 (32%), Positives = 215/420 (51%), Gaps = 20/420 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L  RG I Q ++   L    +   V+ Y G+D TA+SLH G+L QL+ +  LQ  G
Sbjct: 15  VLDELEWRGLISQSTDRDRLAEALNGEPVSYYCGFDPTAASLHIGNLVQLINMRHLQAAG 74

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H PI+L+GG T +IGDP    E R +     +    E++K      ++   G      ++
Sbjct: 75  HHPIALVGGATGLIGDPRQSGE-RTLNPKDVVAGWAERLKKQIGGILE-TDGDNPVRFVS 132

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W  S+  ID LR++G  F +  ML+ ++V  RL  E+ +SF EF+Y +LQ  DF+ L
Sbjct: 133 NYDWTASMTVIDFLRDVGKNFRLGTMLAKDTVARRLNSEEGISFTEFSYQVLQGNDFLHL 192

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
              Y C L++GGSDQWGN+  G+DL  +++   +   TSP++T A G K GK+   A+WL
Sbjct: 193 FDEYHCVLEIGGSDQWGNLTSGLDLIHKVRGVDVNVFTSPIITDAQGKKFGKSEGNAVWL 252

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIATE 305
           +  M SPY F+Q+W N  D ++ S  K  T LP +EI+R+ K         EA++ +A E
Sbjct: 253 DATMLSPYKFYQFWFNRPDVEMESLLKAFTFLPKTEIERLVKESETNPGAREAQRTLAWE 312

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISK----------------DEVSRG 349
           +T++VHG E   +A  AA   F        +   ++                     + G
Sbjct: 313 VTSLVHGEEATNQAIEAAGALFGRGGDLSSIDEATLEAAIEGLKVEDGHGEKIFAPAAVG 372

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
             +    +KAG   S +EAR+ +KS  + +NN  + +++  +  +DF       +  GKK
Sbjct: 373 DRVAEAGMKAGLFKSISEARKTIKSGGVYLNNVRVDDQEQTLGEEDFLHGRFALIRRGKK 432


>gi|152995102|ref|YP_001339937.1| tyrosyl-tRNA synthetase [Marinomonas sp. MWYL1]
 gi|150836026|gb|ABR70002.1| tyrosyl-tRNA synthetase [Marinomonas sp. MWYL1]
          Length = 448

 Score =  456 bits (1173), Expect = e-126,   Method: Composition-based stats.
 Identities = 162/432 (37%), Positives = 228/432 (52%), Gaps = 20/432 (4%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M     D L+ L  RG I Q++   EL      G  T Y G+D TA SLH GHL  L++L
Sbjct: 15  MTVSSKDLLNDLQARGLIAQMTAEDELKKHLDGGSRTLYCGFDPTADSLHLGHLVPLLVL 74

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GH PI+L+GG T +IGDPSF+   R++  S  +    EKI+G  S F+K+    
Sbjct: 75  KRFQDAGHNPIALVGGATGLIGDPSFKAAERQLNTSDVVASWAEKIRGQVSQFVKFDNVP 134

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMIL 179
             A ++NN  W   +  +D LR+IG  FSVN M++ ESV+ RL RE   +SF EF+Y +L
Sbjct: 135 NPARVVNNLDWAGEMSVLDFLRDIGKHFSVNAMINKESVQQRLNREGAGISFTEFSYALL 194

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK 239
           Q  DF EL + YDC LQ+GGSDQWGNI+ GIDL  R    + F LT PL+T + GTK GK
Sbjct: 195 QGMDFAELNRAYDCTLQIGGSDQWGNIVGGIDLSRRQNQSQTFGLTVPLVTKSDGTKFGK 254

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINE 297
           T SGA+WL+   TS Y F+Q+W N  DADV  F K  T L ++EID + K   +     +
Sbjct: 255 TESGAVWLDSSKTSQYAFYQFWMNTADADVYKFLKFFTFLDLAEIDAIEKADKESGGKPQ 314

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS-----------QHMPTISISKDEV 346
           A+ I+A E T +VHG E  + A       F                   +P+ S++  ++
Sbjct: 315 AQAILAREATKLVHGEEGLQAAERITNALFSGEADQLSEQDLEQIQLDGLPSSSLAGIDL 374

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNS-IISNEKL----QIKLQDFDSTGN 401
                L +L+  AG A S  + +  L+ +++ +N      N+ +         +      
Sbjct: 375 VE-TPLTSLMADAGLAASGKQVKDALQRDSVFVNGVAKGLNDNMSAADIFTTTNGYFGKY 433

Query: 402 IKLSFGKKNHII 413
             +  GKK H +
Sbjct: 434 FLVKLGKKKHHL 445


>gi|88607296|ref|YP_505770.1| tyrosyl-tRNA synthetase [Anaplasma phagocytophilum HZ]
 gi|123494296|sp|Q2GIN1|SYY_ANAPZ RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|88598359|gb|ABD43829.1| tyrosyl-tRNA synthetase [Anaplasma phagocytophilum HZ]
          Length = 412

 Score =  456 bits (1173), Expect = e-126,   Method: Composition-based stats.
 Identities = 188/415 (45%), Positives = 274/415 (66%), Gaps = 7/415 (1%)

Query: 3   AFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
            F S+FL+ L  RG++HQ+++   LD + S G VTAYIG+D TA+SLH G L Q+MLL +
Sbjct: 2   EFNSEFLATLCARGYLHQLTDATALDGIMSSGAVTAYIGFDCTANSLHIGSLMQIMLLRY 61

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD 122
           LQ+ GHKPI L+GG T+ +GDPS ++++R M+    I  N E I  +   F+       D
Sbjct: 62  LQRFGHKPIVLLGGATTKVGDPSGKEKTRAMLSEDNISANKEGILRVIKKFLS-----ED 116

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
            ++++N  WL +  Y+D LREIGS FSVN ML  ESV+SRL R+Q LSFLEF+Y++LQ+Y
Sbjct: 117 VVVVDNAEWLGNYGYLDFLREIGSKFSVNVMLGLESVKSRLSRDQQLSFLEFSYVLLQSY 176

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DFVEL K Y C LQ+GGSDQWGNI+ GIDL  ++  P+L+ +T+PLL  +SG KMGKT  
Sbjct: 177 DFVELHKRYGCILQIGGSDQWGNIVSGIDLARKMGCPQLYGVTTPLLLNSSGAKMGKTAD 236

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKII 302
           GAIWL++ + SPYN+WQY+RN+ D DV    +  T LP+SEI+R+  L+G+E+NEAKKI+
Sbjct: 237 GAIWLDETLYSPYNYWQYFRNVPDQDVGRLLRLFTELPLSEIERLEALKGEELNEAKKIL 296

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFA 362
           AT +T++ HG E A +    A++ F+ + H   + +I+ S+  + +G+ +  L+   G  
Sbjct: 297 ATAVTSICHGAEVALQVENQALKVFEHNDH-DELRSITFSRKTLGQGIPISKLLHMWGLE 355

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS-TGNIKLSFGKKNHIICHL 416
            S +  RR ++    KIN  ++ +E+  +   DFD   G + +  GKK  +   L
Sbjct: 356 ESISAGRRLIRGGGCKINGGVVLDEEKLLNCGDFDDNGGYVAVFCGKKRRLKVVL 410


>gi|301067007|ref|YP_003789030.1| tyrosyl-tRNA synthetase [Lactobacillus casei str. Zhang]
 gi|300439414|gb|ADK19180.1| Tyrosyl-tRNA synthetase [Lactobacillus casei str. Zhang]
          Length = 424

 Score =  456 bits (1173), Expect = e-126,   Method: Composition-based stats.
 Identities = 143/423 (33%), Positives = 215/423 (50%), Gaps = 23/423 (5%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L  RG ++Q+++   L  L  +  V+ Y G D T  SLH GHL   M+L   Q  G
Sbjct: 7   ILDELKWRGALNQLTDEDGLRKLTEEKAVSLYCGTDPTGDSLHVGHLIPFMILKRFQLLG 66

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+P+ ++GGGT  IGDPS R+  R +     I  N +K+     +      G  D  +++
Sbjct: 67  HRPVIVIGGGTGSIGDPSGRNSERVLQTMDTIAANKKKLTAQMENLF----GTDDFRIVD 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  +  +D LR+ G  FSVN ML+ E V SRL  E  +S+ EF Y ILQ+ DF+ L
Sbjct: 123 NYDWLSKLSMLDFLRDYGKLFSVNSMLNKEVVASRL--ENGISYTEFTYQILQSVDFLHL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK--LFALTSPLLTTASGTKMGKTLSGAI 245
            K+ D +LQ+GG+DQWGNI  GIDL  R++ P+   + LT+PL+  A GTK GK+  GA+
Sbjct: 181 FKHEDVQLQIGGADQWGNITAGIDLIHRIEGPEARAYGLTNPLMLKADGTKFGKSAGGAV 240

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIA 303
           WL+ E TSPY F+Q+W N DDADV  F K  T L    I  + +      E  EA++ +A
Sbjct: 241 WLDPEKTSPYEFYQFWFNQDDADVEKFLKFFTFLSRDAIAELVEATKTHPEKREAQRELA 300

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLL 353
             +T  VHG++  ++A   +   F   +            +  PT+   +   +    L+
Sbjct: 301 RAVTKFVHGQKAVDQAENISAALFSGDVAELSADDIKQGFKQFPTVEAPETAENIVTWLV 360

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
                     S  +AR  +++ AI IN +       ++          + +  GKK + +
Sbjct: 361 D---TTKIEPSRRQAREDIQNGAITINGTRQRELDFEVDPSTHFDGQYVIVRRGKKRYFL 417

Query: 414 CHL 416
             +
Sbjct: 418 VDI 420


>gi|225352193|ref|ZP_03743216.1| hypothetical protein BIFPSEUDO_03809 [Bifidobacterium
           pseudocatenulatum DSM 20438]
 gi|225157440|gb|EEG70779.1| hypothetical protein BIFPSEUDO_03809 [Bifidobacterium
           pseudocatenulatum DSM 20438]
          Length = 435

 Score =  456 bits (1173), Expect = e-126,   Method: Composition-based stats.
 Identities = 135/421 (32%), Positives = 218/421 (51%), Gaps = 15/421 (3%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L  RG I Q ++   L    +   ++ Y G+D TA+SLH G+L QL+ +  LQ  G
Sbjct: 15  VLDELEWRGLISQSTDRDRLAEALNGDPISYYCGFDPTAASLHIGNLVQLINMRHLQAAG 74

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H PI+L+GG T +IGDP    E R +     +    E++K      ++   G      ++
Sbjct: 75  HHPIALVGGATGLIGDPRQSGE-RTLNPKDVVAGWAERLKAQIGGILEV-EGSNPVRFVS 132

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W+ S+  ID LR++G  F +  ML+ ++V  RL  E  +SF EF+Y +LQ  DF+ L
Sbjct: 133 NYDWIASMNVIDFLRDVGKNFRLGTMLAKDTVARRLNSEDGISFTEFSYQVLQGNDFLHL 192

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
              Y C L++GGSDQWGN+  G+DL  +++   +   TSP++T A G K GK+   A+WL
Sbjct: 193 FDEYHCVLELGGSDQWGNLTSGLDLIHKVRGVDVNVFTSPIITDAQGKKFGKSEGNAVWL 252

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIATE 305
           +  M SPY F+Q+W N  D+++ +  K  T LP +EI+R+ +         EA++ +A E
Sbjct: 253 DGTMLSPYKFYQFWFNRPDSEMENLLKVFTFLPKAEIERLVEESKTNPGAREAQRTLAWE 312

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISK-----------DEVSRGMGLLT 354
           +T++VHG E   +A  AA   F        +   ++              + + G  +  
Sbjct: 313 VTSLVHGEEATRQAIEAAGALFGRGGDLAGVDESTLEAALDGVKIDGEFAKAAVGDRVAE 372

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
             +KAG   S +EAR+ +K+  + +NN+ + +E+  +   DF       +  GKK   + 
Sbjct: 373 AGMKAGLFKSISEARKTIKAGGVYLNNARVKDEEQVLNENDFLHGRFALIRRGKKALGVV 432

Query: 415 H 415
            
Sbjct: 433 E 433


>gi|256825073|ref|YP_003149033.1| tyrosyl-tRNA synthetase [Kytococcus sedentarius DSM 20547]
 gi|256688466|gb|ACV06268.1| tyrosyl-tRNA synthetase [Kytococcus sedentarius DSM 20547]
          Length = 442

 Score =  456 bits (1173), Expect = e-126,   Method: Composition-based stats.
 Identities = 144/408 (35%), Positives = 218/408 (53%), Gaps = 10/408 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S  L+ L  RG I Q ++  ELD + + G V  YIG+D TA SLH G L QL+ +  LQ+
Sbjct: 24  SGVLAELQWRGVIAQSTDLLELDRMLAAGPVHFYIGFDPTAPSLHVGSLVQLVTMRRLQE 83

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH P+ L+GG T +IGDP    E R +   + +   ++ I      F+ +  G+  A +
Sbjct: 84  AGHIPVVLVGGSTGLIGDPRPTSE-RNLHDRETVARWVDSIAQQVRPFVHF-EGENAATV 141

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  W   +  +D LR++G  F VN+ML  ++V +RL+  Q +S+ EF+Y ILQ YDF 
Sbjct: 142 VNNLDWFGQLGALDFLRDVGKHFRVNQMLKKDAVSARLESSQGISYTEFSYQILQGYDFW 201

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L  +   RLQ+GG DQWGN++ G+D   R++   + ALT+PL+T ASG K GK+   AI
Sbjct: 202 HLFTSLGVRLQVGGQDQWGNLMAGVDYVHRVEGESVHALTTPLVTEASGRKFGKSEGNAI 261

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIA 303
           WL+  MTSP+ F Q+W N +D  VV + +  T L   +I  + +   +      A++ +A
Sbjct: 262 WLDASMTSPWTFHQFWLNAEDEKVVEYLRLFTLLDREQIAELEREVAEAPFKRTAQRALA 321

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQH------MPTISISKDEVSRGMGLLTLIV 357
            E+TT+VHG E  +    AA   F      Q         T  ++  EV  G   + ++V
Sbjct: 322 REMTTLVHGAEITDGVEAAAEALFGKGDLQQVDAGVLLDATAELTGGEVEVGTSWVDVVV 381

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLS 405
             GFA S   A+R L    I +N+  +++ +  I   DF       + 
Sbjct: 382 AVGFADSRKAAKRLLGEGGISVNSQKVTDPEGAITDADFVGGQVAVVK 429


>gi|167997721|ref|XP_001751567.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162697548|gb|EDQ83884.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 502

 Score =  456 bits (1173), Expect = e-126,   Method: Composition-based stats.
 Identities = 150/430 (34%), Positives = 223/430 (51%), Gaps = 18/430 (4%)

Query: 3   AFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
               + + +L ERG I  +++   L   C +  +  Y G+D TA SLH G+L  +++L W
Sbjct: 75  GVSRNVVEVLEERGLIESVTSEE-LKATCMKQRLKVYCGFDPTAESLHLGNLLGIIVLSW 133

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK-YGTGKT 121
            Q+ GH P++L+GG T  IGDPS + + R  +    +  N+  I+ I S+ +K       
Sbjct: 134 FQRCGHIPVALIGGATGRIGDPSGKSKERPALDDDTLVRNVNGIRKILSNILKGNSDEDE 193

Query: 122 DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA 181
             ++LNN  WL  I  +D L+++G +  V  M++ ESV++RL  E  +S+ EF Y +LQ 
Sbjct: 194 KVVVLNNYDWLKEISLLDFLKDVGKYARVGTMMAKESVKARLNSEDGMSYTEFTYQLLQG 253

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER-LKTPKLFALTSPLLTTASGTKMGKT 240
           YDFV L +     +Q+GGSDQWGNI  G DL  R L+    + LT PLL  + GTK GK+
Sbjct: 254 YDFVHLFREEGISVQIGGSDQWGNITAGTDLVRRLLQQEGAYGLTFPLLLKSDGTKFGKS 313

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINE 297
            SGAIWL     SPYNF+Q+     DADV+ F KRLT + + EI   +   K  G   N 
Sbjct: 314 ESGAIWLAPSSLSPYNFYQHLFATPDADVIKFMKRLTFVDIKEIEALEASMKQPGYAPNS 373

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFD----------MSIHSQHMPTISISKDEVS 347
            +K +A E+T  VHG +   +A  A                +   +Q +P+ SIS   V 
Sbjct: 374 VQKRLAEEVTRFVHGEQGLTEALKATQALAPGAAAALDSQTLEAIAQDVPSCSISYSVV- 432

Query: 348 RGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFG 407
            G  L+ + V  G   S    RR +K   + +NN  + +E   +  +D        LS G
Sbjct: 433 -GKPLVDVSVSTGLLQSKAAVRRLIKQGGLYLNNVKVEDEGKTMVAEDIIDDKIFLLSAG 491

Query: 408 KKNHIICHLC 417
           KKN ++  + 
Sbjct: 492 KKNRLVVRVT 501


>gi|281356701|ref|ZP_06243192.1| tyrosyl-tRNA synthetase [Victivallis vadensis ATCC BAA-548]
 gi|281316828|gb|EFB00851.1| tyrosyl-tRNA synthetase [Victivallis vadensis ATCC BAA-548]
          Length = 427

 Score =  456 bits (1173), Expect = e-126,   Method: Composition-based stats.
 Identities = 165/431 (38%), Positives = 237/431 (54%), Gaps = 27/431 (6%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L  RGF +Q ++   ++ L +   V  Y+G+D T +SLH GHL  +M +  +QK 
Sbjct: 2   NIYQELKARGFCYQQTDEEAIEKLLTTEQVKFYVGFDPTGNSLHVGHLLPVMAMRLMQKA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH PI L+GG T+ IGDPS R  +R MM  + I+EN+  ++     FI  G GK  A  +
Sbjct: 62  GHIPIVLVGGATAQIGDPSGRISARPMMTLETIEENVRCLRNQLKRFIDDGDGK--AHFV 119

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WLC I YI++LRE+GS FSVNRML+ ESV+SRL  E  LSFLEFNY ILQ YDF  
Sbjct: 120 NNADWLCKIGYIEMLREVGSIFSVNRMLAQESVKSRL--ENGLSFLEFNYSILQGYDFYI 177

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG-AI 245
           L +++ C+L+MGG DQWGN++ G +L  R    ++  +T PLL  ++G K GKT  G  +
Sbjct: 178 LNRDFGCKLEMGGQDQWGNMVAGTELVRRKSGNEVQCMTIPLLMNSNGQKFGKTSGGTNV 237

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
           WL+   TS ++++Q+WRN DDA V       + LP+ EI R+    G  IN AK+I+A E
Sbjct: 238 WLDVNRTSVFDYYQFWRNSDDAQVEKLMLYFSPLPIDEIKRICDPAG-NINRAKEILAYE 296

Query: 306 ITTMVHGREEAEKAATAAMECF------------------DMSIHSQHMPTISISKDEVS 347
            T + HG   A +A   A   F                  D +     +PT  I      
Sbjct: 297 ATCLAHGEAAAREAFVTAGTRFGFADPEKKVATTSSILTVDTANVQAELPTAEIDGAVFD 356

Query: 348 R--GMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLS 405
              G+ +  L+V AG   S ++ RR ++  A+ I++  +++    +    F   G++ L 
Sbjct: 357 DPAGVTVAKLLVLAGLCKSNSDGRRLIQGGAVSIDDEKVADPVAAVTRDSF-KAGSLTLR 415

Query: 406 FGKKNHIICHL 416
            GKKN     L
Sbjct: 416 AGKKNFRRVIL 426


>gi|302822525|ref|XP_002992920.1| hypothetical protein SELMODRAFT_136175 [Selaginella moellendorffii]
 gi|300139265|gb|EFJ06009.1| hypothetical protein SELMODRAFT_136175 [Selaginella moellendorffii]
          Length = 467

 Score =  455 bits (1172), Expect = e-126,   Method: Composition-based stats.
 Identities = 144/426 (33%), Positives = 228/426 (53%), Gaps = 22/426 (5%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           + + + IL +RG +  I+    L   C +  +  Y G+D TA SLH G+L  +++L W Q
Sbjct: 49  RRNVVEILEQRGLVESIA-GESLKKACDEKPIKVYCGFDPTAESLHLGNLLGIVVLEWFQ 107

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + GH+ ++L+GG T  IGDPS +   R +M    I++N + I+ + +  +     +  A+
Sbjct: 108 RCGHETVALLGGATGRIGDPSGKSAERPVMDEATIEKNTQGIQALLTEIL-----QQKAV 162

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           +LNN  W      ++ LR++G F  V  M++ ESV+ RL  E+ +SF EF Y +LQ YDF
Sbjct: 163 VLNNYDWWKEFSLLEFLRDVGKFARVGTMVAKESVKRRLASEEGISFTEFTYQLLQGYDF 222

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT-PKLFALTSPLLTTASGTKMGKTLSG 243
           V L K+    +Q+GGSDQWGNI  GIDL  +L      + LT PLL  + GTK GK+  G
Sbjct: 223 VHLYKSNGVSVQIGGSDQWGNITAGIDLVRKLLQRDDAYGLTFPLLVKSDGTKFGKSEGG 282

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK---LQGKEINEAKK 300
           A+WL+ +  SPY+F+Q+     D+DV+   + LT + + EI+ + K     G   N A++
Sbjct: 283 AVWLSSKFLSPYHFYQHLFATPDSDVIKMLRMLTFVELEEIEALEKSMSEPGYVANTAQR 342

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMS----------IHSQHMPTISISKDEVSRGM 350
            +A E+T  VHG +  E+A          S            S+ +P+ ++    V    
Sbjct: 343 RLAEEVTRFVHGEDGLEEALKVTQALSPGSTTTLDWTAIEAISRDVPSCTLDSSVVVG-- 400

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            ++ L V  G A S   ARR +K   I +NN+ + +E+L +   D      + LS GKKN
Sbjct: 401 PVVDLCVSCGLAPSKAVARRLIKQGGIYMNNAKVDDERLLVAESDIIDGKMLLLSAGKKN 460

Query: 411 HIICHL 416
            ++  +
Sbjct: 461 KMVVRI 466


>gi|212715753|ref|ZP_03323881.1| hypothetical protein BIFCAT_00653 [Bifidobacterium catenulatum DSM
           16992]
 gi|212661120|gb|EEB21695.1| hypothetical protein BIFCAT_00653 [Bifidobacterium catenulatum DSM
           16992]
          Length = 435

 Score =  455 bits (1172), Expect = e-126,   Method: Composition-based stats.
 Identities = 137/421 (32%), Positives = 218/421 (51%), Gaps = 15/421 (3%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L  RG I Q ++   L    +   ++ Y G+D TA+SLH G+L QL+ +  LQ  G
Sbjct: 15  VLDELEWRGLISQSTDRDRLAEALNGDPISYYCGFDPTAASLHIGNLVQLINMRHLQAAG 74

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H PI+L+GG T +IGDP    E R +     +    E++K      ++   G      ++
Sbjct: 75  HHPIALVGGATGLIGDPRQSGE-RTLNPKDVVAGWAERLKAQIGGILEV-EGSNPVRFVS 132

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W  S+  ID LR++G  F +  ML+ ++V  RL  E  +SF EF+Y +LQ  DF+ L
Sbjct: 133 NYDWTASMNVIDFLRDVGKNFRLGTMLAKDTVARRLNSEDGISFTEFSYQVLQGNDFLHL 192

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
              Y C L++GGSDQWGN+  G+DL  +++   +   TSP++T A G K GK+   A+WL
Sbjct: 193 FDEYHCVLELGGSDQWGNLTSGLDLIHKVRGVDVNVFTSPIITDAQGKKFGKSEGNAVWL 252

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIATE 305
           +  M SPY F+Q+W N  D+++ +  K  T LP  EI+R+ +         EA++ +A E
Sbjct: 253 DGTMLSPYKFYQFWFNRPDSEMENLLKVFTFLPKVEIERLVEESKTNPGAREAQRTLAWE 312

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISK--------DEVSR---GMGLLT 354
           +T++VHG E   +A  AA   F        +   ++          DE ++   G  +  
Sbjct: 313 VTSLVHGEEATRQAIEAAGALFGRGGDLAGVDESTLEAALDGVKIDDEFAKAAVGDRVAE 372

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
             +KAG   S +EAR+ +K+  + +NN+ + +E+  +   DF       +  GKK   + 
Sbjct: 373 AGMKAGLFKSISEARKTIKAGGVYLNNTRVEDEEQILNENDFLHGRFALIRRGKKALGVV 432

Query: 415 H 415
            
Sbjct: 433 E 433


>gi|297626556|ref|YP_003688319.1| Tyrosyl-tRNA synthetase (Tyrosine--tRNA ligase) (TyrRS)
           [Propionibacterium freudenreichii subsp. shermanii
           CIRM-BIA1]
 gi|296922321|emb|CBL56893.1| Tyrosyl-tRNA synthetase (Tyrosine--tRNA ligase) (TyrRS)
           [Propionibacterium freudenreichii subsp. shermanii
           CIRM-BIA1]
          Length = 422

 Score =  455 bits (1172), Expect = e-126,   Method: Composition-based stats.
 Identities = 140/414 (33%), Positives = 215/414 (51%), Gaps = 16/414 (3%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L+ RGF+   ++   L      G+VT+Y+G+D TA SLH GHL QL+L   LQ+ G
Sbjct: 4   LLDDLTWRGFVADSTDRDALAAHLDAGMVTSYVGFDPTARSLHIGHLMQLILARRLQQAG 63

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+P+ L+GG T +IGDP    E R M   + +   +  +      ++ +  G+  + ++N
Sbjct: 64  HRPLLLIGGSTGLIGDPKMTGE-RVMNTKETVSAWVASLAEQTKKYVSF-EGENGSRIVN 121

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W   +  +D LR+IG  FSVNRML+ + V  RL  E  +S+ EF+Y++LQ++D+ EL
Sbjct: 122 NLDWTGPLSALDFLRDIGKHFSVNRMLARDVVARRL--EDGISYTEFSYVLLQSFDYAEL 179

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            + Y C LQ G  DQWGNI  G D   R     +  L +PLLT A GTK GKT  G +WL
Sbjct: 180 HRLYGCTLQTGAQDQWGNITAGADYIRRTTGDIVHGLVTPLLTKADGTKFGKTEGGTVWL 239

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATE 305
           + E+TSPY F Q+W N +DA V+ + K  +     E+  +A+   Q      A++ +A +
Sbjct: 240 DPELTSPYAFHQFWLNAEDAKVMDYLKIFSFRSHDELAELAEQTEQAPYKRLAQRALADD 299

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQ-HMPTISISKDEVSRGM---------GLLTL 355
           +T +VHG E  + A  AA   F     +     TIS    EV              ++  
Sbjct: 300 VTDLVHGVEARKAADEAARALFGRGELAALDDATISAVMGEVKATEVSTRDGELPTVVDA 359

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
           +  +G   S + ARR ++     +NN+ +++   ++      +     L  GKK
Sbjct: 360 LAASGVVASKSAARRTIQEGGAYVNNAKVTDPDARLSADQLLAGRYAVLRRGKK 413


>gi|254226310|ref|ZP_04919901.1| tyrosyl-tRNA synthetase [Vibrio cholerae V51]
 gi|125621172|gb|EAZ49515.1| tyrosyl-tRNA synthetase [Vibrio cholerae V51]
          Length = 434

 Score =  455 bits (1171), Expect = e-126,   Method: Composition-based stats.
 Identities = 150/426 (35%), Positives = 221/426 (51%), Gaps = 23/426 (5%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L +RG I Q +    L    +   V  Y G+D TA SLH GHL  L++L   Q  G
Sbjct: 14  LFDDLQQRGLIAQSTPLEALVERFATSQV-LYCGFDPTAGSLHIGHLVPLLMLKRFQNAG 72

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM-L 126
           H+ I+L+GG T +IGDPSF+   R +  +Q +Q+ +  +    +  +   +    +LM +
Sbjct: 73  HQAIALIGGATGMIGDPSFKANERVLNSAQTVQQWVSDLSQQITQLMASQSENCASLMTV 132

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDFV 185
           NN  W+  I  ID  R++G  FSVN M++ ESV+ RL R +Q +SF EF+Y +LQ+YDF 
Sbjct: 133 NNADWIGKINLIDFFRDVGKHFSVNTMINRESVKQRLARPDQGISFTEFSYSLLQSYDFA 192

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L + + C LQ+GG+DQWGNI+ GIDL  RL   ++  LT PL+T + GTK GKT SGA+
Sbjct: 193 HLNREFGCTLQIGGNDQWGNIVSGIDLTRRLNGAEVCGLTLPLITKSDGTKFGKTESGAV 252

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIA 303
           WL    TSPY F+Q+W N DDADV  F    T L  +EI+ + +         +A++I+A
Sbjct: 253 WLESSKTSPYRFYQFWLNSDDADVYRFLAYYTFLSAAEIEEIRQADALRAGKPQAQQILA 312

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIH-----------SQHMPTISISKDEVSRGMGL 352
             +T  VHG E    A       F   +               +P ++ S+ +    +  
Sbjct: 313 EHVTRFVHGEEGLAAAQRITQALFSGDVSYLSLSELAQLELDGLPCVAASRSDTLLDLL- 371

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
               + AG A+S  +AR  L++ AI++N   +  E   +            L  GKK   
Sbjct: 372 ----LSAGLASSKRQAREWLENGAIRVNGERVQQEG--VLSGFALFDRYYVLQRGKKQFA 425

Query: 413 ICHLCG 418
           +  L G
Sbjct: 426 LVKLEG 431


>gi|220916278|ref|YP_002491582.1| tyrosyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-1]
 gi|254783565|sp|B8JFS8|SYY_ANAD2 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|219954132|gb|ACL64516.1| tyrosyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-1]
          Length = 420

 Score =  455 bits (1171), Expect = e-126,   Method: Composition-based stats.
 Identities = 150/423 (35%), Positives = 232/423 (54%), Gaps = 19/423 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + L  L  R  +H  +    L    +QG +T Y+G+D TA SLH GHL  +M L WLQ+ 
Sbjct: 3   NLLEALVSRSLVHDQTP--GLQARLAQGPITGYVGFDPTADSLHVGHLLAVMSLAWLQRC 60

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           G  PI ++GGGT ++GDPS +   R ++  +EI  N+  I+     F+ +  G+  A + 
Sbjct: 61  GGTPIIVVGGGTGMVGDPSGKRSERPVLSVEEIDRNVAAIRAQLERFVSF-EGQNAARVR 119

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL +I  ++ LR++G  F+VN ML+ +SV+ R++    +SF EF+Y ++QAYDF  
Sbjct: 120 NNADWLRAIGLMEFLRDVGKHFTVNYMLAKDSVKGRMES--GISFTEFSYQLIQAYDFWH 177

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L ++  C LQMGGSDQWGNI  G +L  R     +  LT PLLTTASGTK GKT  GA+W
Sbjct: 178 LFRSEKCELQMGGSDQWGNITAGAELVSRKDGASVHGLTFPLLTTASGTKFGKTEGGAVW 237

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIAT 304
           L+   TSPY F+Q+W N DD DV    K  T L + EI  +   Q ++     A++ +A 
Sbjct: 238 LDPARTSPYKFFQFWLNTDDRDVERLLKFFTFLSVEEIAALLAEQARDPGKRPAQRRLAE 297

Query: 305 EITTMVHGREEAEKAATAAMECFDM-----------SIHSQHMPTISISKDEVSRGMGLL 353
           ++T  VHG +       A+   F              + +  +P+ +++ DE++  + + 
Sbjct: 298 DVTARVHGPDVTRSVVEASRILFGGTDLRAASADVLEVLAGEIPSATVTGDELAA-LTVA 356

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            L+VK G A S  E RR +      +N +++ +   ++   D  + G   L  GK+N+ +
Sbjct: 357 DLLVKVGLAASKGEVRRGVAGRGFSLNGAVLESGDAKVAAGDLLAGGYALLQKGKRNYAL 416

Query: 414 CHL 416
             +
Sbjct: 417 VKV 419


>gi|307941634|ref|ZP_07656989.1| tyrosyl-tRNA synthetase [Roseibium sp. TrichSKD4]
 gi|307775242|gb|EFO34448.1| tyrosyl-tRNA synthetase [Roseibium sp. TrichSKD4]
          Length = 426

 Score =  455 bits (1171), Expect = e-126,   Method: Composition-based stats.
 Identities = 184/413 (44%), Positives = 272/413 (65%), Gaps = 2/413 (0%)

Query: 2   PAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
              KS+ L +L ERG ++Q S+   LD   ++G VT Y G+D TA+SLH GHL  LM L 
Sbjct: 13  TPLKSETLQVLLERGLVNQASDLEALDARLAEGPVTVYAGFDATAASLHVGHLMPLMTLR 72

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKT 121
           W+QK GH+PI+++GGGT+ +GDPSFR+E+R ++   +I  N+  I+      +    G  
Sbjct: 73  WMQKLGHRPIAVLGGGTTQVGDPSFRNEARPLLDELKIASNVSGIRRCIERLVSM-DGDD 131

Query: 122 DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA 181
            AL+++N  WL   ++++ LR+ GS F+VNRM++FESV+SRL  +  L+ LEF YM+LQA
Sbjct: 132 GALLVDNAEWLTEFRFLEFLRDYGSQFTVNRMVTFESVKSRLDTQSPLTVLEFCYMMLQA 191

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            DF+EL++ Y+C +Q+GGSDQWGNI+ GI+LG +    KL  LT PLLTTASG KMGKT 
Sbjct: 192 VDFLELSRRYNCEMQIGGSDQWGNIVNGIELGRKADGRKLHGLTVPLLTTASGAKMGKTA 251

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKI 301
           +GA+WL+ E  SP+ FWQ+WRN  DADV  F +  T LPM+E++R++ L+G E+N+AKK+
Sbjct: 252 AGAVWLHPEHLSPFVFWQFWRNTADADVGRFLRLFTELPMNEVERLSALEGHELNDAKKV 311

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGF 361
           +AT++T +VHG EEA KA       F  +      PT  + +  +S G+GLL L+V  GF
Sbjct: 312 LATQVTAIVHGPEEARKALEQGEALFGGAEELLE-PTHVLPRIRLSEGLGLLELLVLVGF 370

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           A S  EARR ++   +++N  ++ + + QI   +  +   + L+ GK+   + 
Sbjct: 371 AGSNGEARRLVEGGGVRLNRQVVDDARRQITAGNLQADDRLALAVGKRRKALV 423


>gi|332520083|ref|ZP_08396547.1| tyrosyl-tRNA synthetase [Lacinutrix algicola 5H-3-7-4]
 gi|332044642|gb|EGI80836.1| tyrosyl-tRNA synthetase [Lacinutrix algicola 5H-3-7-4]
          Length = 436

 Score =  455 bits (1171), Expect = e-126,   Method: Composition-based stats.
 Identities = 151/435 (34%), Positives = 233/435 (53%), Gaps = 28/435 (6%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           F+  L  RG +H I    E     S+ + TAYIG+D T+ SLH G L  ++LL  L+K G
Sbjct: 5   FVEELRWRGMVHDIMPGTE--EQLSKEMTTAYIGFDPTSDSLHIGSLVPIILLVHLEKAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM-L 126
           HKP++L+GG T +IGDPS + + R ++  + +  N++ IK + S F+ + + K +A + +
Sbjct: 63  HKPVALVGGATGMIGDPSGKSDERNLLDEKALAHNVQGIKNVLSRFLDFNSTKKNAPVLV 122

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ---SLSFLEFNYMILQAYD 183
           NN  W+ +  +ID  R++G   +VN M++ +SV+ RL  E+    +SF EF Y ++Q YD
Sbjct: 123 NNYDWMKNFSFIDFARDVGKRLTVNYMMAKDSVKKRLSGEEGSVGMSFTEFTYQLIQGYD 182

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERL----KTPKLFALTSPLLTTASGTKMGK 239
           F  L K  DC+LQMGGSDQWGNI  G +L  R+    +T K +A+T PL+T A G+K GK
Sbjct: 183 FYYLHKEMDCKLQMGGSDQWGNITTGTELVRRMNVGDETAKAYAMTCPLITKADGSKFGK 242

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINE 297
           +  G +WL+ + TS Y F+Q+W N  D D   + K  T L    I+       +   +  
Sbjct: 243 SEGGNVWLDTDKTSVYKFYQFWLNTTDEDAEKYIKIFTFLDKETIENLVAEHKETPHLRL 302

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISK 343
            +K +A E+TT VH   +   A  A+   F  + +               + +P   + K
Sbjct: 303 LQKQLAKEVTTFVHSEADFLNAEKASGILFSKTFNEDIRTLDEKLFLDVFEGVPQAELPK 362

Query: 344 DEVSRGMG-LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNI 402
            ++  G+  +  L  K  F  S  EARR LK NA+ +N   +  E   I  +D  +   +
Sbjct: 363 ADLDNGIDMIAALAAKTNFLNSNGEARRALKENAVSVNKEKVK-EDYLITNKDLINGKYV 421

Query: 403 KLSFGKKNHIICHLC 417
            L+ GKKN  I  + 
Sbjct: 422 VLNKGKKNTYIIKVV 436


>gi|163839558|ref|YP_001623963.1| tyrosyl-tRNA synthetase [Renibacterium salmoninarum ATCC 33209]
 gi|162953034|gb|ABY22549.1| tyrosyl-tRNA synthetase [Renibacterium salmoninarum ATCC 33209]
          Length = 465

 Score =  455 bits (1170), Expect = e-126,   Method: Composition-based stats.
 Identities = 146/420 (34%), Positives = 221/420 (52%), Gaps = 11/420 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           ++    L  RG +   ++  EL+   S   VT Y G+D TA+SLH GHL QL+L+  LQ 
Sbjct: 45  ANVWQELLWRGLVQVSTDQAELEKALSTETVTYYCGFDPTAASLHLGHLVQLLLMRRLQL 104

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDP      R M   +++ E +  I+     F+ +  G+  A M
Sbjct: 105 AGHKPLALVGGSTGLIGDPRP-TTERSMQTKEQVAEWVADIQAQVQPFLSF-EGENAARM 162

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  W   +  ID LREIG  + V  M+  + V SRL  ++ +S+ EF+Y ILQ  DF+
Sbjct: 163 VNNLDWTAPMSAIDFLREIGKHYRVGTMIKKDIVASRLNSDEGISYAEFSYQILQGLDFL 222

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L + Y C LQ GGSDQWGN+  G +L  + +   + A+ +PL+T + GTK GK+   AI
Sbjct: 223 SLYRQYGCTLQSGGSDQWGNLTSGTELIRKAEGGAVHAIGTPLITNSDGTKFGKSEGNAI 282

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIA 303
           WLN  MTSPY F+Q+W N  D+DVV   K  T    +EI  + K   +  +E  A+K +A
Sbjct: 283 WLNPAMTSPYEFYQFWLNTADSDVVERLKIFTFRSRAEIAELEKATAERPHERTAQKALA 342

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQ------HMPTISISKDEVSRG-MGLLTLI 356
            E+ ++VHG    EK   A+   F     S+         T  + +  V    +G++ L+
Sbjct: 343 WEVNSLVHGITATEKVIAASAAIFGNGELSELDEATLSAATAELPRATVPASTLGIVELL 402

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V  G   S + ARR +      +NN+ I + +  I+         + L  GK+   +  +
Sbjct: 403 VATGLVESNSAARRTISDGGAYVNNTKILDAEYVIESTLLLHGRYLLLRRGKRTMAMVEV 462


>gi|297621555|ref|YP_003709692.1| Tyrosyl-tRNA synthetase [Waddlia chondrophila WSU 86-1044]
 gi|297376856|gb|ADI38686.1| Tyrosyl-tRNA synthetase [Waddlia chondrophila WSU 86-1044]
          Length = 427

 Score =  455 bits (1170), Expect = e-126,   Method: Composition-based stats.
 Identities = 154/424 (36%), Positives = 235/424 (55%), Gaps = 16/424 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ L  L ERGFI  +++ +  D L  +  V  Y G+D T+ SLH G++  +M L W QK
Sbjct: 2   SNLLETLRERGFIESVTHDQLGDFL--EKQVHVYCGFDPTSDSLHLGNMVAIMGLAWFQK 59

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH P  ++GG T +IGDPS + + R+++  +++  N+E I+  F   + +   K   ++
Sbjct: 60  FGHTPYVILGGATGMIGDPSGKSKERQLLDEKQLSRNVEGIRKNFHGILDFTLAKASPVV 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           LNN  W     ++  LRE+G +F V+ MLS ESVR+RL+ E+ LSF EF+Y +LQ YDF+
Sbjct: 120 LNNYDWFRQFSFVQFLREVGKYFRVSTMLSKESVRTRLESEEGLSFTEFSYQLLQGYDFL 179

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L +N++  +Q+GGSDQWGNI  GIDL  R+   +++ LT PLLTT+ G K GK+  GAI
Sbjct: 180 YLNENHNVSVQIGGSDQWGNITAGIDLVRRVAGKEVYGLTMPLLTTSDGKKFGKSEEGAI 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE---INEAKKII 302
           WL+ +  SPY F+QY   + D DV+   K LT + M EI +   +  +E    N A+K +
Sbjct: 240 WLSPDKLSPYQFYQYLVRVQDNDVIRLMKMLTFMEMDEIRKYESMMEREDYVPNTAQKRL 299

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSI----------HSQHMPTISISKDEVSRGMGL 352
           A E+T MVHG +  + A                       +  MP+ +   +E+     L
Sbjct: 300 AAEVTQMVHGDQGLKTALKVTEAAKPGRETDLNAEVLESIAHDMPSETFKAEEIVNN-KL 358

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           + ++V  G   S  +ARR +++    +NN  ++ E       DF     I L+ GKKN  
Sbjct: 359 IDVVVLTGLQESKGQARRLIRNGGCYLNNKKMTEENHVFTADDFVDGRLILLAVGKKNKK 418

Query: 413 ICHL 416
           +  L
Sbjct: 419 LIRL 422


>gi|149919718|ref|ZP_01908196.1| tyrosyl-tRNA synthetase [Plesiocystis pacifica SIR-1]
 gi|149819489|gb|EDM78919.1| tyrosyl-tRNA synthetase [Plesiocystis pacifica SIR-1]
          Length = 448

 Score =  455 bits (1170), Expect = e-126,   Method: Composition-based stats.
 Identities = 179/438 (40%), Positives = 264/438 (60%), Gaps = 25/438 (5%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           +P F+S  L +L+ERGFI Q S+   +D   S G+VT Y GYD TA SLHAG L  +M +
Sbjct: 7   LPPFESSALKVLAERGFIEQGSDFAAIDAALSAGMVTFYTGYDPTADSLHAGSLLTIMAM 66

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG- 119
             LQK GH+PI LMGG T+++GDPS R E+R+++ ++ I+ N+  ++  FS F+ + TG 
Sbjct: 67  RHLQKAGHRPIVLMGGATAMVGDPSGRSETRKILTTETIRHNVSALRKQFSRFVHFDTGA 126

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
             DAL+++N  WL  ++YI+ LR+IG  F+VNRM++ ++ R RL+ E  LSFLEFNY +L
Sbjct: 127 DNDALLVDNADWLLGVRYIEFLRDIGRHFTVNRMIAAKTYRDRLEGELPLSFLEFNYQLL 186

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL--------KTPK---------LF 222
           QAYDF+ L + +DCR+Q+GGSDQWGN+I G++L  R+                      +
Sbjct: 187 QAYDFLHLMREHDCRMQVGGSDQWGNMIAGVELIRRVAADHNKAQGQDPGEADAAPAHAY 246

Query: 223 ALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMS 282
            LT PLLTTA G KMGKT  GA+WL+ E  SPY+++QYW N  D DV +  +  T LPM 
Sbjct: 247 CLTYPLLTTADGGKMGKTAKGAVWLDPERYSPYDYYQYWINCHDRDVETLLRVFTELPMD 306

Query: 283 EIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISIS 342
           ++  +A  +GK +NE+K ++A E T ++HG +EA +A TA  + F        +P I + 
Sbjct: 307 QVRELASREGKALNESKAMLAYEATRLLHGEDEAARARTATAQAFGKGEDWSALPLIEVP 366

Query: 343 KDEVSRGMGLLTLIV--KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG 400
                  + LL L+V        S  +AR  +KS A+KI+   +++    I  +     G
Sbjct: 367 ----GESIKLLDLVVHEAVKGFKSKRDARERIKSGAVKIDGESVTDVNEVITAERCGEDG 422

Query: 401 NIKLSFGKKNHIICHLCG 418
            ++L  G+K  +   L G
Sbjct: 423 -LRLQTGRKRRLRVKLSG 439


>gi|219684522|ref|ZP_03539465.1| tyrosyl-tRNA synthetase [Borrelia garinii PBr]
 gi|219671884|gb|EED28938.1| tyrosyl-tRNA synthetase [Borrelia garinii PBr]
          Length = 405

 Score =  455 bits (1170), Expect = e-126,   Method: Composition-based stats.
 Identities = 157/408 (38%), Positives = 238/408 (58%), Gaps = 7/408 (1%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L++L +RGF+ Q ++   L  L  +  +  Y G D T+SSLH GHL   + +  L++ GH
Sbjct: 5   LNLLYKRGFLKQCTSLEVLSDLMDREKIVFYAGVDATSSSLHIGHLIPFLAMMHLRQHGH 64

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
            PI L+G  T+ IGDPS + E R+++ S+EI  N   IK       ++ +       ++N
Sbjct: 65  MPIILIGDSTAKIGDPSGKSEMRKILSSEEINNNALSIKNQLQRITRFSSS----CFIHN 120

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL ++ YI+ LR+IG  FSVNRMLSFE+ + RL  +  LSF+EFNY +LQ+YD+  L 
Sbjct: 121 SNWLDNLNYIEFLRDIGIHFSVNRMLSFETYKRRL--DFGLSFIEFNYQLLQSYDYYMLN 178

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
           K  +CRLQ+GG DQWGNI+ G+DL  R    + F +T PL+T + G KMGK+  GA++L+
Sbjct: 179 KIKNCRLQIGGDDQWGNIVSGVDLIRRKMGVEAFGVTFPLITRSDGKKMGKSEKGAVYLD 238

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITT 308
             + S Y+F+QY+RN  D+DV +F    T L   EI+ ++  +G  +N+AK+I+A EIT 
Sbjct: 239 SSLYSIYDFYQYFRNTSDSDVKTFLYLFTFLEEDEIESISNFKGNSLNKAKEILAFEITK 298

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
           +VHG  EA K   A+   F  S    ++P    S   +   + L+ L++ +    S +E 
Sbjct: 299 IVHGEAEALKVQEASFAAFRGSGDRSNIPFFKFSFSGLEEEILLINLMLDSKIVPSKSEG 358

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           RR + S  + IN   + N+   I  +DF +   I+L  GKK  +   L
Sbjct: 359 RRLINSGGVYINGKRVENQNHCITREDF-NNNEIELRVGKKKFLRIVL 405


>gi|302796549|ref|XP_002980036.1| hypothetical protein SELMODRAFT_111886 [Selaginella moellendorffii]
 gi|300152263|gb|EFJ18906.1| hypothetical protein SELMODRAFT_111886 [Selaginella moellendorffii]
          Length = 467

 Score =  454 bits (1169), Expect = e-125,   Method: Composition-based stats.
 Identities = 144/426 (33%), Positives = 228/426 (53%), Gaps = 22/426 (5%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           + + + IL +RG +  I+    L   C +  +  Y G+D TA SLH G+L  +++L W Q
Sbjct: 49  RRNVVEILEQRGLVESIA-GESLKKACDEKPIKVYCGFDPTAESLHLGNLLGIVVLEWFQ 107

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + GH+ ++L+GG T  IGDPS +   R +M    I++N + I+ + +  +     +  A+
Sbjct: 108 RCGHETVALLGGATGRIGDPSGKSAERPVMDEATIEKNTQGIQALLTEIL-----QQKAV 162

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           +LNN  W      ++ LR++G F  V  M++ ESV+ RL  E+ +SF EF Y +LQ YDF
Sbjct: 163 VLNNYDWWKEFSLLEFLRDVGKFARVGTMVAKESVKRRLALEEGISFTEFTYQLLQGYDF 222

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT-PKLFALTSPLLTTASGTKMGKTLSG 243
           V L K+    +Q+GGSDQWGNI  GIDL  +L      + LT PLL  + GTK GK+  G
Sbjct: 223 VHLYKSNGVSVQIGGSDQWGNITAGIDLVRKLLQRDDAYGLTFPLLVKSDGTKFGKSEGG 282

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK---LQGKEINEAKK 300
           A+WL+ +  SPY+F+Q+     D+DV+   + LT + + EI+ + K     G   N A++
Sbjct: 283 AVWLSSKFLSPYHFYQHLFATPDSDVIKMLRMLTFVELEEIEALEKSMSEPGYVANTAQR 342

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMS----------IHSQHMPTISISKDEVSRGM 350
            +A E+T  VHG +  E+A          S            S+ +P+ ++    V    
Sbjct: 343 RLAEEVTRFVHGEDGLEEALKVTQALAPGSTTTLDWTAIEAISKDVPSCTLDSSIVVG-- 400

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            ++ L V  G A S   ARR +K   I +NN+ + +E+L +   D      + LS GKKN
Sbjct: 401 PVVDLCVSCGLAPSKAVARRLIKQGGIYMNNAKVDDERLLVAESDIIDGKMLLLSAGKKN 460

Query: 411 HIICHL 416
            ++  +
Sbjct: 461 KMVVRI 466


>gi|227534079|ref|ZP_03964128.1| tyrosyl-tRNA synthetase (tyrosine--tRNA ligase) [Lactobacillus
           paracasei subsp. paracasei ATCC 25302]
 gi|227188283|gb|EEI68350.1| tyrosyl-tRNA synthetase (tyrosine--tRNA ligase) [Lactobacillus
           paracasei subsp. paracasei ATCC 25302]
          Length = 424

 Score =  454 bits (1168), Expect = e-125,   Method: Composition-based stats.
 Identities = 143/423 (33%), Positives = 214/423 (50%), Gaps = 23/423 (5%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L  RG ++Q+++   L  L  +  V+ Y G D T  SLH GHL   M+L   Q  G
Sbjct: 7   ILDELKWRGALNQLTDEDGLRKLTEEKAVSVYCGTDPTGDSLHVGHLIPFMILKRFQLLG 66

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+P+ ++GGGT  IGDPS R+  R +     I  N +K+     +      G  D  +++
Sbjct: 67  HRPVIVIGGGTGSIGDPSGRNSERVLQTMDTIAANKKKLTAQMENLF----GTDDFRIVD 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  +  +D LR+ G  FSVN ML+ E V SRL  E  +S+ EF Y ILQ+ DF+ L
Sbjct: 123 NYDWLSKLSMLDFLRDYGKLFSVNSMLNKEVVASRL--ENGISYTEFTYQILQSVDFLHL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK--LFALTSPLLTTASGTKMGKTLSGAI 245
            K+ D +LQ+GG+DQWGNI  GIDL  R++ P+   + LT+PL+  A GTK GK+  GA+
Sbjct: 181 FKHEDVQLQIGGADQWGNITAGIDLIHRIEGPEARAYGLTNPLMLKADGTKFGKSAGGAV 240

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIA 303
           WL+ E TSPY F+Q+W N DDADV  F K  T L    I  + +      E  EA++ +A
Sbjct: 241 WLDPEKTSPYEFYQFWFNQDDADVEKFLKFFTFLSRDAIAELVEATKTHPEKREAQRELA 300

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLL 353
             +T  VHG++  ++A   +   F   +            +  PT+   +   +    L+
Sbjct: 301 RAVTKFVHGQKAVDQAENISAALFSGDVAELSADDIKQGFKQFPTVEAPETAENIVTWLV 360

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
                     S   AR  +++ AI IN +       ++          + +  GKK + +
Sbjct: 361 D---TTKIEPSRRRAREDIQNGAITINGTRQRELDFEVDPSTHFDGQYVIVRRGKKRYFL 417

Query: 414 CHL 416
             +
Sbjct: 418 VDI 420


>gi|291301906|ref|YP_003513184.1| tyrosyl-tRNA synthetase [Stackebrandtia nassauensis DSM 44728]
 gi|290571126|gb|ADD44091.1| tyrosyl-tRNA synthetase [Stackebrandtia nassauensis DSM 44728]
          Length = 416

 Score =  454 bits (1168), Expect = e-125,   Method: Composition-based stats.
 Identities = 139/413 (33%), Positives = 218/413 (52%), Gaps = 14/413 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L  RG I   ++   L      G V  Y+G+D TA+SLH GH TQ++    LQ  
Sbjct: 2   NIFDDLQWRGLIQDATDSDALRAHFEAGPVRFYVGFDPTAASLHVGHFTQVLTARRLQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+P+ L+GG T  IGDP    E R M   + +   +++I+     F+ Y  G   A+++
Sbjct: 62  GHRPLLLVGGATGQIGDPKESGE-RVMNSPEVVAGYLDRIREQMRPFVTY-DGDNAAVLV 119

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   +  ID LR++G  F VN+ML+ + V++RL+    +SF EF Y ++QA D+  
Sbjct: 120 NNLDWTGRMNAIDFLRDVGKHFPVNKMLARDVVKARLES--GISFTEFAYQLIQANDYYN 177

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + Y C +Q GGSDQWGNI  G+D   R  +  + A  +PL+T A GTK GKT  GA+W
Sbjct: 178 LHQEYGCSVQFGGSDQWGNITAGVDFIRRKGSGPVHAFVTPLVTKADGTKFGKTEGGAVW 237

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIAT 304
           L+ E+T+PY F+Q+W N+DD D+ ++ +R +     EI  + K   ++     A++ +A 
Sbjct: 238 LDPELTTPYAFYQFWVNVDDRDIGTYLRRFSFKSHDEILELDKATAEKPAARAAQRALAE 297

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGM-------GLLTLIV 357
           E+TT++HG  E  +   A+   F     S+  P+ ++       G+        +  L  
Sbjct: 298 ELTTLLHGETECAQVIAASKALFGRGELSELAPS-TLESALSEAGLVTATDDSPITALFK 356

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
           + G   ST+EARR +      +NN  I++   ++   +        L  GKKN
Sbjct: 357 ETGLTASTSEARRAIADGGAYVNNVRITDVDAKLADVELLHGRFAVLRRGKKN 409


>gi|254784884|ref|YP_003072312.1| tyrosine--tRNA ligase [Teredinibacter turnerae T7901]
 gi|237686409|gb|ACR13673.1| tyrosine--tRNA ligase [Teredinibacter turnerae T7901]
          Length = 432

 Score =  453 bits (1167), Expect = e-125,   Method: Composition-based stats.
 Identities = 156/432 (36%), Positives = 229/432 (53%), Gaps = 22/432 (5%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M A  ++ L  L  RG + Q++    L     +   T Y G+D TA SLH G L  L+ L
Sbjct: 1   MTAASNELLEDLQARGLVAQMTGDDALHAWL-EQPRTLYCGFDPTADSLHIGSLVPLLTL 59

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GHKP++L+GG T +IGDPSF+ + R++     +   ++K++G  S FI++  G+
Sbjct: 60  KRFQMAGHKPLALVGGATGLIGDPSFKAQERKLNTPDIVAGWVDKLRGQVSQFIEFDCGE 119

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMIL 179
             A ++NN  W+  I  +D LR++G  FS+N M+  ESV+ RL RE + +SF EF YMIL
Sbjct: 120 NAAEVVNNLDWIGQINVLDFLRDVGKHFSINNMVQKESVKQRLDREGEGISFTEFTYMIL 179

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK 239
           Q+YDF EL K YDC LQ+GGSDQWGNI  G DL  RL   ++F LT PL+T + GTK GK
Sbjct: 180 QSYDFAELYKQYDCTLQIGGSDQWGNITGGTDLTRRLHGGQVFGLTLPLVTKSDGTKFGK 239

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE--INE 297
           T +G IWL+   TSPY F+Q+W N  DADV  F +  T L ++EI+ +           +
Sbjct: 240 TETGTIWLDPAKTSPYAFYQFWLNTADADVYKFLRYFTFLSVAEINAIEDTDKAAEGRPQ 299

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS-----------QHMPTISISKDEV 346
           A+ I+A E+T +VHG E    A       F   +               +P+  +  D  
Sbjct: 300 AQSILAEEVTRLVHGDEGLAAAQRITQAMFSGDLADLSETDLEQLALDGLPSGDLPSDYA 359

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEK-----LQIKLQDFDSTGN 401
            +   L +L+ + G   +  EA+  L   A+ IN +    E      +   ++       
Sbjct: 360 DK--PLTSLLAECGMVKAAREAKDALGRKAVFINGTAYGAEDNMNASVCFAVERALYDRF 417

Query: 402 IKLSFGKKNHII 413
             +  GKK + +
Sbjct: 418 YLVKLGKKKNFL 429


>gi|261878996|ref|ZP_06005423.1| tyrosine-tRNA ligase [Prevotella bergensis DSM 17361]
 gi|270334381|gb|EFA45167.1| tyrosine-tRNA ligase [Prevotella bergensis DSM 17361]
          Length = 432

 Score =  453 bits (1167), Expect = e-125,   Method: Composition-based stats.
 Identities = 139/434 (32%), Positives = 218/434 (50%), Gaps = 27/434 (6%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
            +F+  L  RG + QI    E      Q +V+AY+G D TA SLH GHL  +M+L  LQ+
Sbjct: 2   KNFVEELKWRGMLAQIMPGTE--EYLLQNMVSAYLGTDPTADSLHIGHLCGIMMLRHLQR 59

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK-TDAL 124
            GHKP  L+GG T +IGDPS + + R ++ +  +  N E IK   + F+ +   +   A 
Sbjct: 60  CGHKPYLLVGGATGMIGDPSGKSQERNLLDADTLYHNQEAIKKQCAKFLDFDGNELNKAE 119

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK--REQSLSFLEFNYMILQAY 182
           ++NN  W+    ++D  R +G   +VN M++ ESV+ RL       LSF EF Y +LQ Y
Sbjct: 120 LVNNYDWMKDFTFLDFARTVGKHITVNYMMAKESVQQRLNGTARDGLSFTEFTYQLLQGY 179

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKT 240
           DF+ L ++   RLQ+GG+DQWGN+  G +L  R      + FALT PL+T A G K GKT
Sbjct: 180 DFLHLYQHNGVRLQLGGNDQWGNMTTGTELIRRTLGNDVEAFALTCPLITKADGKKFGKT 239

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEA 298
            SG +WL++  T+PY F+Q+W N+ D D   + K  T L    I  +     ++      
Sbjct: 240 ESGNVWLDRNRTTPYTFYQFWLNVSDDDAERYIKIFTDLDRETIAALVAEHTEDPGRRTL 299

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQ--------------HMPTISISKD 344
           ++ +A E+TTMVH +E+ + A  A+   F  +   Q               +P   + + 
Sbjct: 300 QRRLAEEVTTMVHSKEDLDMAIAASNILFGKATKDQLAQLDEATLNDVFKDVPHYELDRT 359

Query: 345 EVSRGMGLLTLIVKA--GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNI 402
           ++  G   + L  +       S  E R+ +K   + +N   +      +   D      +
Sbjct: 360 QL--GGKAIDLFCQEDWEIFPSKGEMRKMVKGGGVSLNKEKLVAFDQPVTADDLIDGKYL 417

Query: 403 KLSFGKKNHIICHL 416
            +  GKKN+ +  +
Sbjct: 418 LMQRGKKNYYLISV 431


>gi|126662992|ref|ZP_01733990.1| putative tyrosyl-tRNA synthetase 1 [Flavobacteria bacterium BAL38]
 gi|126624650|gb|EAZ95340.1| putative tyrosyl-tRNA synthetase 1 [Flavobacteria bacterium BAL38]
          Length = 435

 Score =  453 bits (1166), Expect = e-125,   Method: Composition-based stats.
 Identities = 155/436 (35%), Positives = 233/436 (53%), Gaps = 28/436 (6%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
            + +  L  RG  H +    E  +L  +   TAYIG+D TA SLH G L Q++LL  L+K
Sbjct: 2   KNLVEELRWRGLFHDMMPGTEEQLL--KEATTAYIGFDPTADSLHIGSLVQIILLMHLRK 59

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
           +GHK I+L+GG T +IGDPS +   R ++    +  N+E IK + S F+ +     +A +
Sbjct: 60  SGHKAIALVGGATGMIGDPSGKSNERNLLDEATLNHNVEGIKSVLSRFLDFDAKDENAPI 119

Query: 126 -LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE---QSLSFLEFNYMILQA 181
            +NN  W+    +ID  R+IG   +VN M+S +SV+ RL  E   + +SF EF Y ++Q 
Sbjct: 120 LVNNYDWMKDFSFIDFARDIGKRITVNYMMSKDSVKKRLSGEEGAEGMSFTEFTYQLIQG 179

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-----TPKLFALTSPLLTTASGTK 236
           YDF  L K+Y+C LQMGGSDQWGNI  G +L  R+        K +ALT+PL+T A G+K
Sbjct: 180 YDFYHLNKHYNCLLQMGGSDQWGNITTGTELVRRMNVGNDDKSKAYALTTPLITKADGSK 239

Query: 237 MGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KE 294
            GK+  G +WL+ + TS Y F+Q+W N  D D   + K  T L    I+++         
Sbjct: 240 FGKSEGGNVWLDADKTSVYKFYQFWLNATDVDAEKYIKIFTFLDKDTIEKLIAAHNEAPH 299

Query: 295 INEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS-------------QHMPTISI 341
           +   +K +A EIT MVH   + E A  A+   F  S+               + +P   I
Sbjct: 300 LRVLQKRLAEEITVMVHSAADLENAIAASNAFFSPSMDELKKLDEKTFLEVFEGVPQAEI 359

Query: 342 SKDEVSRGMG-LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG 400
           S ++++ G+  +  L  K  F  S ++ARR LK N+I +N   +  E   I  +D  +  
Sbjct: 360 SMEDLNAGLDMIAALAAKTNFLASNSDARRELKQNSISLNKEKV-GEDKIITKEDLINNQ 418

Query: 401 NIKLSFGKKNHIICHL 416
            + L  GKKN+ +  +
Sbjct: 419 FLLLQKGKKNYYVIKV 434


>gi|212550781|ref|YP_002309098.1| tyrosyl-tRNA synthetase [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
 gi|212549019|dbj|BAG83687.1| tyrosyl-tRNA synthetase [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
          Length = 434

 Score =  453 bits (1166), Expect = e-125,   Method: Composition-based stats.
 Identities = 143/430 (33%), Positives = 230/430 (53%), Gaps = 22/430 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG IH I+   E      + +  AY+G D TA SLH GHL  +M+L   Q+ 
Sbjct: 4   NFIEELRWRGMIHNITPGTE--EQLEKEMTVAYMGIDPTADSLHVGHLVGVMMLKHFQQA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD-ALM 125
           GH PI L+GG T +IGDPS + + R ++  + +++N   I+   +  + + +  ++ A++
Sbjct: 62  GHCPIVLIGGATGMIGDPSMKSQERNLLNEETLRKNQNGIRIQLAKLLDFDSNISNIAIL 121

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ--SLSFLEFNYMILQAYD 183
           +NN  W+    +++ +R+IG + +VN M+S +SVR RL  +    +SF EF+Y + Q YD
Sbjct: 122 VNNYDWIRDYSFLNFIRDIGKYITVNYMMSKDSVRKRLAADAKVGMSFTEFSYQLFQGYD 181

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           ++ L +NY+CRLQMGG+DQWGNI  GI+L  +    K+FALT PL+T   G+K GKT +G
Sbjct: 182 YLFLYENYNCRLQMGGADQWGNITTGIELIRKKVGGKVFALTCPLITKTDGSKFGKTEAG 241

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKKI 301
            IWL+K  TSPY F+Q+W N+ D D   + +  T L   EI+ +         +   ++ 
Sbjct: 242 NIWLDKRYTSPYKFYQFWLNVSDIDAEKYIRIFTVLSKKEIENLISKHKLAPHLRSLQRS 301

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDEVS 347
           +A E+T MVH +E+ E A   +   F  +  S                +P   I K+ +S
Sbjct: 302 LAKEVTIMVHSQEDYEMAVKTSTILFGNATSSFLKQLDKDTLENIFVGIPQFEIFKESLS 361

Query: 348 RGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+  + L+V      +S  E R+ +++  + IN   +      I          I +  
Sbjct: 362 LGIKAVDLLVDNIHIFSSRGEMRKLVQNGGVSINKEKLPIFDHLIDCSYLLRGRYILVQK 421

Query: 407 GKKNHIICHL 416
           GKKN  +  +
Sbjct: 422 GKKNCFLLKV 431


>gi|117621106|ref|YP_855114.1| tyrosyl-tRNA synthetase [Aeromonas hydrophila subsp. hydrophila
           ATCC 7966]
 gi|189083640|sp|A0KFT8|SYY_AERHH RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|117562513|gb|ABK39461.1| tyrosyl-tRNA synthetase [Aeromonas hydrophila subsp. hydrophila
           ATCC 7966]
          Length = 422

 Score =  453 bits (1166), Expect = e-125,   Method: Composition-based stats.
 Identities = 149/420 (35%), Positives = 224/420 (53%), Gaps = 12/420 (2%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L+ RG + Q S+P  L    +    T Y G+D TA SLH GHL  L++L   Q  G
Sbjct: 6   LLDELTRRGLVAQNSDPVALADHLAT-PRTVYCGFDPTAGSLHIGHLVPLLMLRRFQLAG 64

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H P++L+GG T +IGDPSF+   R +  S+ +Q  +  +     + +    G    L++N
Sbjct: 65  HTPVALVGGATGLIGDPSFKATERNLNSSETVQGWVASLSAQIKALLPASEGLAAPLLVN 124

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDFVE 186
           N  W+  +  +D LR+IG  FSVN ML  ESVR RL R +Q +SF EF+Y +LQ+ D+  
Sbjct: 125 NADWMGQMSALDFLRDIGKHFSVNAMLVRESVRQRLARPDQGISFTEFSYALLQSQDYAV 184

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L +   C LQ+GG+DQWGNI  G+DL  RL   +++ +T PL+T A GTK GKT  GAIW
Sbjct: 185 LNQRLGCTLQIGGNDQWGNITSGMDLTRRLHQAQVYGMTLPLITKADGTKFGKTEGGAIW 244

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIAT 304
           L+  +TSPY F+Q+W    D DV  F +  + +P++EI+ +     K      A++++A 
Sbjct: 245 LDPALTSPYAFYQFWLGTADEDVYRFLRYYSFMPLTEIEALEAEDAKRQGRKLAQQVLAD 304

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTLIVK 358
           E+T +VHG+     A   +   F   +          +    +    +     L+TL+V+
Sbjct: 305 ELTELVHGKGALAAAQRISELLFSGEVARLGESDLAQLAQDGMPGWRIEGETDLVTLLVE 364

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLCG 418
           +G A S   AR  L + AI +N  I   E   ++  D     ++ L  GKK + +    G
Sbjct: 365 SGLANSKRIARELLAAGAISLNGEIRREE--PLRAADRLFGRHLLLRRGKKQYRLVTWQG 422


>gi|224534271|ref|ZP_03674849.1| tyrosine--tRNA ligase [Borrelia spielmanii A14S]
 gi|224514373|gb|EEF84689.1| tyrosine--tRNA ligase [Borrelia spielmanii A14S]
          Length = 405

 Score =  453 bits (1166), Expect = e-125,   Method: Composition-based stats.
 Identities = 159/408 (38%), Positives = 239/408 (58%), Gaps = 7/408 (1%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L++L +RGF+ Q ++ R L  L  +  V  Y G D T++SLH GHL   + +  L++ GH
Sbjct: 5   LNLLHKRGFLKQCTSLRVLSDLMDREKVVFYAGVDATSNSLHIGHLIPFLAMMHLRQHGH 64

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
            PI L+G  T+ IGDPS + E R+++ S+EI  N   IK       K+ +       ++N
Sbjct: 65  IPIVLIGDSTTKIGDPSGKSEMRKILSSEEISNNAFSIKNQLQRITKFSST----CFIHN 120

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL ++ YI+ LR+IG  FSVNRMLSFE+ + RL  +  LSF+EFNY +LQ+YD+  L 
Sbjct: 121 SNWLDNLNYIEFLRDIGIHFSVNRMLSFETYKRRL--DFGLSFIEFNYQLLQSYDYYMLN 178

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
           K  +CRLQ+GG DQWGNI+ GIDL +R    + F LT PL+T + G KMGK+  GA++L+
Sbjct: 179 KIKNCRLQIGGDDQWGNIVSGIDLIKRKAGVEAFGLTFPLITRSDGKKMGKSEKGAVYLD 238

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITT 308
             + S Y+F+QY+RN  D+DV +F    T L   +I+ ++  +G  +N+AK+I+A EIT 
Sbjct: 239 SSLYSIYDFYQYFRNTSDSDVKTFLYLFTFLEEDKIELISNFKGNSLNKAKEILAFEITK 298

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
           +VHG  EA K   A+   F       ++P    S   +   + L+ L++ +    S +E 
Sbjct: 299 IVHGEAEALKVQEASFAAFRGKGDRSNIPFFKFSFSSLEEVVLLIDLMLDSKIVPSKSEG 358

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           RR + S  + IN   + N    +  +DF +   I+L  GKKN +   L
Sbjct: 359 RRLINSGGVYINGKRVENPSHCLTREDF-NNNEIELRVGKKNFLRIVL 405


>gi|197121511|ref|YP_002133462.1| tyrosyl-tRNA synthetase [Anaeromyxobacter sp. K]
 gi|254783566|sp|B4UGQ8|SYY_ANASK RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|196171360|gb|ACG72333.1| tyrosyl-tRNA synthetase [Anaeromyxobacter sp. K]
          Length = 420

 Score =  453 bits (1166), Expect = e-125,   Method: Composition-based stats.
 Identities = 149/423 (35%), Positives = 232/423 (54%), Gaps = 19/423 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + L  L  R  +H  +    L    +QG +T Y+G+D TA SLH GHL  +M L WLQ+ 
Sbjct: 3   NLLEALVSRSLVHDQTP--GLQARLAQGPITGYVGFDPTADSLHVGHLLAVMSLAWLQRC 60

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           G  PI ++GGGT ++GDPS +   R ++  +EI  N+  I+     F+ +  G+  A + 
Sbjct: 61  GGTPIIVVGGGTGMVGDPSGKRSERPVLSVEEIDRNVAAIRAQLERFVSF-EGQNAARVR 119

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL +I  ++ LR++G  F+VN ML+ +SV+ R++    +SF EF+Y ++QAYDF  
Sbjct: 120 NNADWLRAIGLMEFLRDVGKHFTVNYMLAKDSVKGRMES--GISFTEFSYQLIQAYDFWH 177

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L ++  C LQMGGSDQWGNI  G +L  R     +  LT PLLTTASGTK GKT  GA+W
Sbjct: 178 LFRSEKCELQMGGSDQWGNITAGAELVSRKDGASVHGLTFPLLTTASGTKFGKTEGGAVW 237

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIAT 304
           L+   TSPY F+Q+W N DD DV    K  T L + +I  +   Q ++     A++ +A 
Sbjct: 238 LDPARTSPYKFFQFWLNTDDRDVERLLKFFTFLSVEDIAALLAEQARDPGKRPAQRRLAE 297

Query: 305 EITTMVHGREEAEKAATAAMECFDM-----------SIHSQHMPTISISKDEVSRGMGLL 353
           ++T  VHG +       A+   F              + +  +P+ +++ DE++  + + 
Sbjct: 298 DVTARVHGPDVTRSVIEASRILFGGTDLRAASADVLDVLAGEIPSAAVTGDELAA-LTIA 356

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            L+VK G A S  E RR +      +N +++ +   ++   D  + G   L  GK+N+ +
Sbjct: 357 DLLVKVGLAASKGEVRRGVAGRGFSLNGAVLESGDAKVAAGDLLAGGYALLQKGKRNYAL 416

Query: 414 CHL 416
             +
Sbjct: 417 VKV 419


>gi|183601732|ref|ZP_02963102.1| tyrosyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           HN019]
 gi|219683736|ref|YP_002470119.1| tyrosyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           AD011]
 gi|241190770|ref|YP_002968164.1| tyrosyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           Bl-04]
 gi|241196176|ref|YP_002969731.1| tyrosyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis DSM
           10140]
 gi|254783568|sp|B8DU64|SYY_BIFA0 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|183219338|gb|EDT89979.1| tyrosyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           HN019]
 gi|219621386|gb|ACL29543.1| tyrosyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           AD011]
 gi|240249162|gb|ACS46102.1| tyrosyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           Bl-04]
 gi|240250730|gb|ACS47669.1| tyrosyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis DSM
           10140]
 gi|289178506|gb|ADC85752.1| Tyrosyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           BB-12]
 gi|295793759|gb|ADG33294.1| tyrosyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis V9]
          Length = 440

 Score =  453 bits (1166), Expect = e-125,   Method: Composition-based stats.
 Identities = 136/425 (32%), Positives = 219/425 (51%), Gaps = 20/425 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L  RG I Q ++   L    +   V  Y G+D TA SLH G+L QL+++  LQ+ G
Sbjct: 15  VLDELEWRGLISQSTDRDRLAHTLNGEPVHYYCGFDPTAPSLHIGNLVQLIIMRHLQEAG 74

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H PI+L+GG T +IGDP    E R +     +++  E+++      ++   G      ++
Sbjct: 75  HHPIALVGGATGLIGDPRQSGE-RILNPKDIVEQWCERLRIQIGGILEQ-EGSNPVTFVS 132

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W  ++  +D LR+IG  F V  M+S + V  RL  E+ +SF EF+Y +LQ  D++ L
Sbjct: 133 NYDWTATMNVLDFLRDIGKNFRVGTMISKDIVARRLNSEEGISFTEFSYQVLQGNDYLYL 192

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
             +YDC L++GGSDQWGN+  G+DL  +++   +  + SP++T A+G K GK+   A+WL
Sbjct: 193 YDHYDCVLELGGSDQWGNLTSGLDLIHKVRGVNVNVMASPIITDANGKKFGKSEGNAVWL 252

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIATE 305
           +  M S Y F+Q+W N  D ++ S  K  T LP +EI+R+ +         EA++++A E
Sbjct: 253 DPNMLSVYKFYQFWLNRPDVEMASLLKAFTFLPKAEIERLVEATDTNPGAREAQRVLAWE 312

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISK----------------DEVSRG 349
           +T++VHG E   KA  A+   F        +   ++                   +   G
Sbjct: 313 VTSLVHGDEPTRKAIDASASLFGRGGDLADIDLETLESVLDGLKVENEAGEKVFAQALPG 372

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
             +    V AG   S +EAR+ +KS  + +NN  + +E+  +   DF     + L  GKK
Sbjct: 373 DRIAQAGVSAGLFKSISEARKTIKSGGVYVNNVRVEDEEQLLGDGDFLKGRFVVLRRGKK 432

Query: 410 NHIIC 414
              + 
Sbjct: 433 ALGVV 437


>gi|309805131|ref|ZP_07699184.1| tyrosine--tRNA ligase [Lactobacillus iners LactinV 09V1-c]
 gi|309809022|ref|ZP_07702896.1| tyrosine--tRNA ligase [Lactobacillus iners SPIN 2503V10-D]
 gi|308165585|gb|EFO67815.1| tyrosine--tRNA ligase [Lactobacillus iners LactinV 09V1-c]
 gi|308170678|gb|EFO72697.1| tyrosine--tRNA ligase [Lactobacillus iners SPIN 2503V10-D]
          Length = 417

 Score =  453 bits (1165), Expect = e-125,   Method: Composition-based stats.
 Identities = 145/416 (34%), Positives = 208/416 (50%), Gaps = 25/416 (6%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGV-VTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           D L  L  RG I+Q ++ + L     Q   +T Y G D T  SLH GHL   M+L   Q 
Sbjct: 2   DILEDLKWRGAINQQTDEQGLREYLQQHKDLTLYCGTDPTGDSLHIGHLIPFMILKRFQM 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            G+ PI L+GG T  IGDPS R   R +   ++++ N + +            G  +  +
Sbjct: 62  AGYHPIILIGGATGAIGDPSGRKTERVLQSEEQVRHNEKCLTSQMEKLF----GTENFEI 117

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN +WL  +  +D LR+ G  F VN ML+ + V SRL     +S+ EF Y I+QA DF 
Sbjct: 118 VNNASWLSKLTLLDFLRDYGKLFQVNTMLNKDIVASRLA--TGISYTEFTYQIMQAIDFY 175

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSG 243
            L KN +  LQ+GG DQWGNI  GIDL  R++      F LT PL+  + GTK GK+  G
Sbjct: 176 YLNKNKNVTLQIGGGDQWGNITGGIDLIHRIEGADHPAFGLTIPLMLKSDGTKFGKSAGG 235

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKI 301
           AIWL+ E TSPY F+Q+W N DD DV+ + K  T L   EI+ +A    KE     A++ 
Sbjct: 236 AIWLDPEKTSPYEFYQFWINQDDRDVIKYLKYFTFLSHQEIEDLAISVEKEPWKRLAQRK 295

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMG 351
           +A E+T  VHG      A       F+ +I            ++ P + ISK        
Sbjct: 296 LAEEVTKFVHGEAGLRDAQFITNALFEGNIKELSVKQIEQGFKNAPYVEISK----ESKN 351

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFG 407
           L+ L+V+ G   S  +AR  + + AI +N S   +    + + +      + +  G
Sbjct: 352 LVDLLVETGIEKSKRQAREDINNGAIYVNGSRQDDCDFLVDVPNSFEGKFVIIRRG 407


>gi|309808169|ref|ZP_07702079.1| tyrosine--tRNA ligase [Lactobacillus iners LactinV 01V1-a]
 gi|315653252|ref|ZP_07906175.1| tyrosine--tRNA ligase [Lactobacillus iners ATCC 55195]
 gi|308168550|gb|EFO70658.1| tyrosine--tRNA ligase [Lactobacillus iners LactinV 01V1-a]
 gi|315489415|gb|EFU79054.1| tyrosine--tRNA ligase [Lactobacillus iners ATCC 55195]
          Length = 417

 Score =  453 bits (1165), Expect = e-125,   Method: Composition-based stats.
 Identities = 144/416 (34%), Positives = 208/416 (50%), Gaps = 25/416 (6%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGV-VTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           D L  L  RG I+Q ++ + L     Q   +T Y G D T  SLH GHL   M+L   Q 
Sbjct: 2   DILEDLKWRGAINQQTDEQGLREYLQQHKDLTLYCGTDPTGDSLHIGHLIPFMILKRFQM 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            G+ PI L+GG T  IGDPS R   R +   ++++ N + +            G  +  +
Sbjct: 62  AGYHPIILIGGATGAIGDPSGRKTERVLQSEEQVRHNEKCLTSQMEKLF----GTENFEI 117

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN +WL  +  +D LR+ G  F VN ML+ + V SRL     +S+ EF Y I+QA DF 
Sbjct: 118 VNNASWLSKLTLLDFLRDYGKLFQVNTMLNKDIVASRLA--TGISYTEFTYQIMQAIDFY 175

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSG 243
            L KN +  LQ+GG DQWGNI  GIDL  R++      F LT PL+  + GTK GK+  G
Sbjct: 176 YLNKNKNVTLQIGGGDQWGNITGGIDLIHRIEGADHPAFGLTIPLMLKSDGTKFGKSAGG 235

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKI 301
           AIWL+ E TSPY F+Q+W N DD DV+ + K  T L   EI+ +A    KE     A++ 
Sbjct: 236 AIWLDPEKTSPYEFYQFWINQDDRDVIKYLKYFTFLSHQEIEDLAISVEKEPWKRLAQRK 295

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMG 351
           +A E+T  VHG      A       F+ +I            ++ P + IS+        
Sbjct: 296 LAEEVTKFVHGEAGLRDAQFITNALFEGNIKELSVKQIEQGFKNAPYVEISQ----ESKN 351

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFG 407
           L+ L+V+ G   S  +AR  + + AI +N S   +    + + +      + +  G
Sbjct: 352 LVDLLVETGIEKSKRQAREDINNGAIYVNGSRQDDCDFLVDVPNSFEGKFVIIRRG 407


>gi|312875341|ref|ZP_07735349.1| tyrosine--tRNA ligase [Lactobacillus iners LEAF 2053A-b]
 gi|311089175|gb|EFQ47611.1| tyrosine--tRNA ligase [Lactobacillus iners LEAF 2053A-b]
          Length = 417

 Score =  453 bits (1165), Expect = e-125,   Method: Composition-based stats.
 Identities = 145/416 (34%), Positives = 209/416 (50%), Gaps = 25/416 (6%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGV-VTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           D L  L  RG I+Q ++ + L     Q   +T Y G D T  SLH GHL   M+L   Q 
Sbjct: 2   DILEDLKWRGAINQQTDEQGLREYLQQHKDLTLYCGTDPTGDSLHIGHLIPFMILKRFQM 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            G+ PI L+GG T  IGDPS R   R +   ++++ N + +            G  +  +
Sbjct: 62  AGYHPIILIGGATGAIGDPSGRKTERVLQSEEQVRHNEKCLTSQMEKLF----GTENFEI 117

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN +WL  +  +D LR+ G  F VN ML+ + V SRL     +S+ EF Y I+QA DF 
Sbjct: 118 VNNASWLSKLTLLDFLRDYGKLFQVNTMLNKDIVASRLA--TGISYTEFTYQIMQAIDFY 175

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSG 243
            L KN +  LQ+GG DQWGNI  GIDL  R++      F LT PL+  + GTK GK+  G
Sbjct: 176 YLNKNKNVTLQIGGGDQWGNITGGIDLIHRIEGADHPAFGLTIPLMLKSDGTKFGKSAGG 235

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKI 301
           AIWL+ E TSPY F+Q+W N DD DV+ + K  T L   EI+ +A    KE     A++ 
Sbjct: 236 AIWLDPEKTSPYEFYQFWINQDDRDVIKYLKYFTFLSHQEIEDLAISVEKEPWKRLAQRK 295

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMG 351
           +A E+T  VHG      A       F+ +I            ++ P + ISK        
Sbjct: 296 LAEEVTKFVHGEAGLRDAQFITNALFEGNIKELSVKQIEQGFKNAPYVEISK----ESKN 351

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFG 407
           L+ L+V+ G   S  +AR  + + AI +N S  ++    + + +      + +  G
Sbjct: 352 LVDLLVETGIEKSKRQAREDINNGAIYVNGSRQNDCDFLVDVPNSFEGKFVIIRRG 407


>gi|308800504|ref|XP_003075033.1| TyrS Tyrosyl-tRNA synthetase, probable (IC) [Ostreococcus tauri]
 gi|119358861|emb|CAL52305.2| TyrS Tyrosyl-tRNA synthetase, probable (IC) [Ostreococcus tauri]
          Length = 488

 Score =  453 bits (1165), Expect = e-125,   Method: Composition-based stats.
 Identities = 145/429 (33%), Positives = 229/429 (53%), Gaps = 16/429 (3%)

Query: 2   PAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
            A   D ++ L  RG     ++   L     Q  +  Y G+D TA SLH G+L  +++L 
Sbjct: 58  SASDEDLITTLKARGLFDSCTDETSLAEAL-QKPLKVYCGFDPTADSLHLGNLLGIVVLS 116

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKT 121
           W Q+ GH+PI L+GG T  +GDPS + + R ++    +  N+  I       +       
Sbjct: 117 WFQRKGHRPIILVGGATGRVGDPSGKSQERPLLDEATLSTNVAAISNSVLRILTRAASNP 176

Query: 122 DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA 181
             ++L+N  W  +I  +D LR++G +  +  MLS +SV+SRL     LSF EF+Y +LQ 
Sbjct: 177 AVVVLDNYDWFRNITLLDFLRDVGKYARLGNMLSKDSVKSRLDGGVGLSFTEFSYQLLQG 236

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK-LFALTSPLLTTASGTKMGKT 240
           YDF+ L +N    +Q+GGSDQWGNI  G +L  R+   +  + LT PLL  + GTK GK+
Sbjct: 237 YDFMHLFRNECVSVQIGGSDQWGNITAGTELVRRVLREEGAYGLTFPLLLKSDGTKFGKS 296

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINE 297
            SGAIWL+KE  SPY+F+QY  N  D DV+   + LT L + EI  +       G   N 
Sbjct: 297 ASGAIWLSKEKLSPYHFYQYLLNTADGDVIRLLRMLTFLSLDEIASIEGSMAEAGYIPNT 356

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMEC----------FDMSIHSQHMPTISISKDEVS 347
           A++I+A E+T  VHG++  ++A  A                + + S  +P+++IS+  V 
Sbjct: 357 AQQILAAEVTRFVHGQDGLDEAIRATESLRPGTETVLDAAALELASDTIPSVAISRVAVV 416

Query: 348 RGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFG 407
             + +  ++V +G   S   A+R L++  I++NN+ +++E   I   D      + L+ G
Sbjct: 417 DNL-VTDVVVVSGLLESKGAAKRMLRNGGIRVNNNKVTDETRTIVEGDIIGDNMLLLAAG 475

Query: 408 KKNHIICHL 416
           KKN ++  L
Sbjct: 476 KKNKLLIRL 484


>gi|313608546|gb|EFR84432.1| tyrosyl-tRNA synthetase [Listeria monocytogenes FSL F2-208]
          Length = 387

 Score =  453 bits (1165), Expect = e-125,   Method: Composition-based stats.
 Identities = 148/391 (37%), Positives = 204/391 (52%), Gaps = 21/391 (5%)

Query: 38  AYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQ 97
            Y G D +  S+H GHL   M+L   Q  GH+PI L+GG T  IGDPS + E R++   +
Sbjct: 1   LYCGIDPSGDSMHIGHLIPFMILRRFQNAGHRPIILVGGATGTIGDPSGKKEERKLQSME 60

Query: 98  EIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFE 157
           +I +N+E ++        +  G + A M+NN  W   +  +D LR+ G  F+VN MLS +
Sbjct: 61  QISKNVESLRVQLGKIFDF-EGDSAASMVNNYDWTKDVSILDFLRDYGKEFNVNTMLSKD 119

Query: 158 SVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK 217
            V SRL  E  +SF EF Y ILQA DF  L +  DCRLQ+GGSDQWGNI  G+DL  + +
Sbjct: 120 IVASRL--EVGISFTEFAYQILQAMDFNHLYEFNDCRLQIGGSDQWGNITAGLDLIRKKQ 177

Query: 218 TP--KLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKR 275
               K F LT PLLT A GTK GK+  GAIWLN E T+PY F+Q+W N DD DVV + K 
Sbjct: 178 GENAKAFGLTIPLLTKADGTKFGKSEGGAIWLNPEKTTPYEFYQFWINTDDRDVVKYLKY 237

Query: 276 LTTLPMSEIDRMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS 333
            T L  +EID +AK       +  A+K +A E+T  VH  E  E+A   +   F   + +
Sbjct: 238 FTFLTEAEIDELAKQVETEPHLRAAQKTLAAEMTKFVHSEEALEQALKISKALFSGDVKA 297

Query: 334 ----------QHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSI 383
                     + +PT      E      L+  +V  G   S  +AR  + + AI IN   
Sbjct: 298 LTADEIEQGFKDVPTFVAEDSE----ANLVDWLVTLGIEPSKRQAREDVGNGAIYINGER 353

Query: 384 ISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
             + +  +   D        +  GKK + + 
Sbjct: 354 QQDLEKIMDASDRIENKFTIVRRGKKKYFLV 384


>gi|259501232|ref|ZP_05744134.1| tyrosine-tRNA ligase [Lactobacillus iners DSM 13335]
 gi|302191040|ref|ZP_07267294.1| tyrosyl-tRNA synthetase [Lactobacillus iners AB-1]
 gi|259167359|gb|EEW51854.1| tyrosine-tRNA ligase [Lactobacillus iners DSM 13335]
          Length = 417

 Score =  452 bits (1164), Expect = e-125,   Method: Composition-based stats.
 Identities = 145/416 (34%), Positives = 209/416 (50%), Gaps = 25/416 (6%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGV-VTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           D L  L  RG I+Q ++ + L     Q   +T Y G D T  SLH GHL   M+L   Q 
Sbjct: 2   DILEDLKWRGAINQQTDEQGLREYLQQHKDLTLYCGTDPTGDSLHIGHLIPFMILKRFQM 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            G+ PI L+GG T  IGDPS R   R +   ++++ N + +            G  +  +
Sbjct: 62  AGYHPIILIGGATGAIGDPSGRKTERVLQSEEQVRHNEKCLTSQMEKLF----GTENFEI 117

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN +WL  +  +D LR+ G  F VN ML+ + V SRL     +S+ EF Y I+QA DF 
Sbjct: 118 VNNASWLSKLTLLDFLRDYGKLFQVNTMLNKDIVASRLA--TGISYTEFTYQIMQAIDFY 175

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSG 243
            L KN +  LQ+GG DQWGNI  GIDL  R++      F LT PL+  + GTK GK+  G
Sbjct: 176 YLNKNKNVTLQIGGGDQWGNITGGIDLIHRIEGADHPAFGLTIPLMLKSDGTKFGKSAGG 235

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKI 301
           AIWL+ E TSPY F+Q+W N DD DV+ + K  T L   EI+ +A    KE     A++ 
Sbjct: 236 AIWLDPEKTSPYEFYQFWINQDDRDVIKYLKYFTFLSHQEIEDLAISVEKEPWKRLAQRK 295

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMG 351
           +A E+T  VHG      A       F+ +I            ++ P + ISK        
Sbjct: 296 LAEEVTKFVHGEAGLRDAQFITNALFEGNIMELSVKQIEQGFKNAPYVEISK----ESKN 351

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFG 407
           L+ L+V+ G   S  +AR  + + AI +N S  ++    + + +      + +  G
Sbjct: 352 LVDLLVETGIEKSKRQAREDINNGAIYVNGSRQNDCDFLVDVPNSFEGKFVIIRRG 407


>gi|254480849|ref|ZP_05094095.1| tyrosyl-tRNA synthetase [marine gamma proteobacterium HTCC2148]
 gi|214038644|gb|EEB79305.1| tyrosyl-tRNA synthetase [marine gamma proteobacterium HTCC2148]
          Length = 431

 Score =  452 bits (1164), Expect = e-125,   Method: Composition-based stats.
 Identities = 157/430 (36%), Positives = 228/430 (53%), Gaps = 21/430 (4%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S  L  L  RG I QI+   +L      G  T Y G+D TA SLH G L  L++L   Q 
Sbjct: 3   SALLEDLRARGLIFQIAGEDDLPAWLDGGPRTLYCGFDPTADSLHIGSLVPLLMLRRFQL 62

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+ + R++     +   ++K+K   + FI +  G   A +
Sbjct: 63  AGHKPLALVGGATGLIGDPSFKTQERQLNTPDIVANWVDKLKAQVARFIDFDAGSVAAEV 122

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDF 184
           +NN  W   +  +  LR+IG  FS+N M+  ESV+ R++RE   +SF EF YMILQ+YDF
Sbjct: 123 VNNLDWTEHMDVLTFLRDIGKHFSINAMIQKESVKQRIEREGSGISFTEFTYMILQSYDF 182

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
            EL K +DC LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT +G 
Sbjct: 183 AELNKRHDCTLQLGGSDQWGNITGGIDLTRRLNGNQVFGLTMPLITKSDGTKFGKTEAGT 242

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE--INEAKKII 302
           IWL+   TSPY F+Q+W    DADV  F K  T L ++EI+ + +         EA+ ++
Sbjct: 243 IWLDAAKTSPYAFYQFWLGCSDADVYRFLKYFTFLEVAEINAIEQADAAREGRPEAQAVL 302

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIH-----------SQHMPTISISKDEVSRGMG 351
           A E+T +VHG E    A       F  SI               +P   +S+ +      
Sbjct: 303 AREVTHLVHGEEGLAAAVRITESLFSGSIEGLAEGDLAQLRQDGLPASHVSRSQFPE--T 360

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIIS-NEKLQI----KLQDFDSTGNIKLSF 406
           L  L+ + G A S  + +  L  +A+ IN+  +  +    +    +L +        +  
Sbjct: 361 LTQLLTEVGMAGSGKQVKDALGRSAVTINSRAVGWDANANVAGCFELSEALYGRYYLVKL 420

Query: 407 GKKNHIICHL 416
           GKK + +  +
Sbjct: 421 GKKKYHLFEI 430


>gi|41582351|gb|AAS07965.1| tyrosyl-tRNA synthetase [uncultured marine bacterium 463]
          Length = 431

 Score =  452 bits (1164), Expect = e-125,   Method: Composition-based stats.
 Identities = 158/430 (36%), Positives = 227/430 (52%), Gaps = 21/430 (4%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S  L  L  RG I QI+   +L      G  T Y G+D TA SLH G L  L++L   Q 
Sbjct: 3   SALLEDLRARGLIFQIAGEDDLPAWLDGGPRTLYCGFDPTADSLHIGSLVPLLMLRRFQL 62

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+ + R++     +   ++K+K   + FI +  G   A +
Sbjct: 63  AGHKPLALVGGATGLIGDPSFKTQERQLNTPDIVANWVDKLKAQVARFIDFDAGSVAAEV 122

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDF 184
           +NN  W   +  +  LR+IG  FS+N M+  ESV+ R++RE   +SF EF YMILQ+YDF
Sbjct: 123 VNNLDWTEHMDVLTFLRDIGKHFSINAMIQKESVKQRIEREGSGISFTEFTYMILQSYDF 182

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
            EL K +DC LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T + GTK GKT +G 
Sbjct: 183 AELNKRHDCTLQLGGSDQWGNITGGIDLTRRLNGNQVFGLTMPLITKSDGTKFGKTEAGT 242

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE--INEAKKII 302
           IWL+   TSPY F+Q+W    DADV  F K  T L +SEI+ + +         EA+ ++
Sbjct: 243 IWLDAAKTSPYAFYQFWLGCSDADVYRFLKYFTFLEVSEINAIEQADAAREGRPEAQAVL 302

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIH-----------SQHMPTISISKDEVSRGMG 351
           A E+T +VHG E    A       F  SI               +P   +S+ +      
Sbjct: 303 AREVTRLVHGEEGLAAAVRITESLFSGSIEGLAEGDLAQLRQDGLPASHVSRSQFPE--T 360

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIIS-NEKLQI----KLQDFDSTGNIKLSF 406
           L  L+ + G A S  + +  L   A+ IN+  +  +    +    +L +        +  
Sbjct: 361 LTQLLTEVGMAGSGKQVKDALGRCAVTINSRAVGWDANANVAGCFELSEALYGRYYLVKL 420

Query: 407 GKKNHIICHL 416
           GKK + +  +
Sbjct: 421 GKKKYHLFEI 430


>gi|219685485|ref|ZP_03540303.1| tyrosine--tRNA ligase [Borrelia garinii Far04]
 gi|219673041|gb|EED30062.1| tyrosine--tRNA ligase [Borrelia garinii Far04]
          Length = 405

 Score =  452 bits (1164), Expect = e-125,   Method: Composition-based stats.
 Identities = 158/408 (38%), Positives = 240/408 (58%), Gaps = 7/408 (1%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L++L +RGF+ Q ++ + L  L  +  +  Y G D T+SSLH GHL   + +  L++ GH
Sbjct: 5   LNLLYKRGFLKQCTSLKVLSDLMDREKIVFYAGVDATSSSLHIGHLIPFLAMMHLREHGH 64

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
            PI L+G  T+ IGDPS + E R+++ S+EI  N   IK       ++ +       ++N
Sbjct: 65  MPIILIGDSTAKIGDPSGKSEMRKILSSEEINNNALSIKNQLQRITRFSSS----CFIHN 120

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL ++ YI+ LR+IG  FSVNRMLSFE+ + RL  +  LSF+EFNY +LQ+YD+  L 
Sbjct: 121 SNWLDNLNYIEFLRDIGIHFSVNRMLSFETYKRRL--DFGLSFIEFNYQLLQSYDYYMLN 178

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
           K  +CRLQ+GG DQWGNI+ G+DL  R    + F +T PL+T + G KMGK+  GA++L+
Sbjct: 179 KIKNCRLQIGGDDQWGNIVSGVDLIRRKMRVEAFGVTFPLITRSDGKKMGKSEKGAVYLD 238

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITT 308
             + S Y+F+QY+RN  D+DV +F    T L   EI+ ++  +G  +N+AK+I+A EIT 
Sbjct: 239 SSLYSIYDFYQYFRNTSDSDVKTFLYLFTFLEEDEIELISNFKGNSLNKAKEILAFEITK 298

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
           +VHG  EA KA  A+   F  S    ++P    S   +   + L+ L++ +    S +E 
Sbjct: 299 IVHGEAEALKAQEASFAAFRGSGDRSNIPFFKFSFSGLEEEILLINLMLDSKIVPSKSEG 358

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           RR + S  + IN   + N+   I  +DF +   I+L  GKK  +   L
Sbjct: 359 RRLINSGGVYINGKRVENQNHCITREDF-NNNEIELRVGKKKFLRIVL 405


>gi|312132229|ref|YP_003999569.1| tyrosyl-tRNA synthetase [Leadbetterella byssophila DSM 17132]
 gi|311908775|gb|ADQ19216.1| tyrosyl-tRNA synthetase [Leadbetterella byssophila DSM 17132]
          Length = 431

 Score =  452 bits (1164), Expect = e-125,   Method: Composition-based stats.
 Identities = 156/431 (36%), Positives = 229/431 (53%), Gaps = 28/431 (6%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
            F+  L  RG I  I    E     ++ + T YIG+D TA SLH G+L  +M+L   Q  
Sbjct: 2   GFIEELRWRGMIQDIMPGTE--EQLNKEMTTGYIGFDPTARSLHIGNLATIMVLKQFQMA 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP++L+GG T ++GDPS +   R  +  + + EN E IK     F+ +  G+  A ++
Sbjct: 60  GHKPLALVGGATGMVGDPSGKSAERNFLSEETLLENQEGIKKQLEKFLDFNCGENSAEIV 119

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I ++  LRE G + +VN M S +SV+ R+  E  +SF EF+Y ++Q YD+  
Sbjct: 120 NNYDWFKDISFLQFLREAGKYLTVNYMSSKDSVKRRI--ETGISFTEFSYQLIQGYDYYH 177

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK----LFALTSPLLTTASGTKMGKTLS 242
           L K    +LQMGGSDQWGNI  G +L  R +        +ALT+PLLT A GTK GK+  
Sbjct: 178 LYKTRGVKLQMGGSDQWGNITTGTELIRRKEGENADYSAYALTTPLLTKADGTKFGKSEG 237

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRL-TTLPMSEID--RMAKLQGKEINEAK 299
           G +WL+ E+TSPY F+Q+W N +DAD+    +     L   +I+       Q   +  A+
Sbjct: 238 GNVWLDPELTSPYQFYQFWINQNDADLPRLMRVYCCFLSKEQIEAIEAEHAQAPHLRVAQ 297

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDE 345
           K +A E+TTMVHG +  EKA  A+   F  S                 + +P   + K +
Sbjct: 298 KALAKEVTTMVHGADAYEKAVQASEVLFGKSTVEALKNLDEQTFKEVFEGVPQTKVQKSD 357

Query: 346 VSRGMGLLTL---IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNI 402
           ++    LL L   +       S  EAR+ L++NA+ +N + I ++KL +   +      I
Sbjct: 358 LTNESNLLELISVLSNGEVYPSKTEARKALQANAVSVNKTKIQDDKLPVNDIELLHGKYI 417

Query: 403 KLSFGKKNHII 413
            L  GKKNHII
Sbjct: 418 LLGKGKKNHII 428


>gi|254284209|ref|ZP_04959177.1| tyrosyl-tRNA synthetase [gamma proteobacterium NOR51-B]
 gi|219680412|gb|EED36761.1| tyrosyl-tRNA synthetase [gamma proteobacterium NOR51-B]
          Length = 430

 Score =  452 bits (1164), Expect = e-125,   Method: Composition-based stats.
 Identities = 155/427 (36%), Positives = 221/427 (51%), Gaps = 22/427 (5%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S  L  L +RG I QI+   +L      G  T Y G+D TA SLH G L  L+ L   Q 
Sbjct: 3   SALLEDLRDRGLIFQIAGEEQLPDWLDGGPRTLYCGFDPTADSLHIGSLVPLLTLRRFQL 62

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   Q +    EKI+   S F+ +  G   A +
Sbjct: 63  AGHKPLALVGGATGLIGDPSFKAAERQLNTPQVVAGWTEKIREQVSRFVDF-EGANAAEV 121

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDF 184
           +NN  W  ++  +  LR+IG  FS+N M+  ESV+ RL+RE + +SF EF YMILQ++DF
Sbjct: 122 VNNLDWTGNVDVLSFLRDIGKHFSINAMVQKESVKQRLEREGEGISFTEFTYMILQSFDF 181

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
            EL + YDC LQ+GGSDQWGNI  GIDL  R    ++F +T PL+T A GTK GKT SG 
Sbjct: 182 SELYQRYDCTLQIGGSDQWGNITGGIDLTRRRFGGQVFGMTLPLVTKADGTKFGKTESGT 241

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKII 302
           IWL+ + TSPY F+Q+W N  DADV  F +  T L + EI  +     + +   E + I+
Sbjct: 242 IWLDPDRTSPYAFYQFWLNTADADVYRFLRYFTFLSVEEIAAIESADSERQGRPEGQGIL 301

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHS-----------QHMPTISISKDEVSRGMG 351
           A ++T +VHG      A       F   + +             +P+  I+    +    
Sbjct: 302 AEQVTALVHGDAGLTAATRITGALFSGEMTALSADDFEQLRLDGLPSSEITAA--AMPPT 359

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIIS-----NEKLQIKLQDFDSTGNIKLSF 406
           L  L+ +AG   S  + +  L   A+ IN   +      + +               L  
Sbjct: 360 LTQLLTEAGVVASGKQVKDALGRGAVLINGVSVDAGQNNDPRTCFNPVASLHNRYFLLRL 419

Query: 407 GKKNHII 413
           GKK + +
Sbjct: 420 GKKKYHL 426


>gi|148273171|ref|YP_001222732.1| hypothetical protein CMM_1990 [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
 gi|147831101|emb|CAN02046.1| tyrS [Clavibacter michiganensis subsp. michiganensis NCPPB 382]
          Length = 434

 Score =  452 bits (1163), Expect = e-125,   Method: Composition-based stats.
 Identities = 140/424 (33%), Positives = 221/424 (52%), Gaps = 13/424 (3%)

Query: 2   PAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
           P+F+ D    +  RG++H  ++   L  L S   +T Y G+D TA SLH G+L QL+L+ 
Sbjct: 16  PSFE-DVWEEIVWRGYVHVSTDQDALKELLSGPPITYYCGFDPTAPSLHLGNLVQLLLMR 74

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKT 121
            LQ  GH+P+ L+GG T +IGDP      R +   + + + + +++   S+F+    G  
Sbjct: 75  RLQLAGHRPLGLVGGSTGLIGDPRP-TAERTLNDPEVVADWVGRVQAQVSAFLSP-EGDN 132

Query: 122 DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA 181
              ++NN  W   +  ID LRE+G  F V  ML  ++V +RL  ++ +S+ EF+Y ILQ 
Sbjct: 133 AVRIVNNLDWTAPMSAIDFLREVGKHFRVGTMLKKDAVSARLNSDEGISYTEFSYQILQG 192

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            DF EL + Y C LQ GGSDQWGN+  G DL  R +     A+ +PL+T + GTK GK+ 
Sbjct: 193 LDFRELHRTYGCVLQTGGSDQWGNLTSGTDLIRRSERTTAHAIGTPLITNSDGTKFGKSE 252

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAK 299
             AIWL+ E+TSPY F+Q+W N +D DV+   +  T L  + I+ +A+    E    EA+
Sbjct: 253 GNAIWLDAELTSPYAFYQFWLNTEDGDVIQRLRLFTFLDRARIEELARAVESEPFRREAQ 312

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQ-HMPTI-----SISKDEVSRGMGLL 353
           + +A E+T++VHG E  E A   A   F     +    PT+      +   ++  G  ++
Sbjct: 313 RTLAWEVTSLVHGIEATESAIAGAQALFGQGELTALDEPTLRAAMGELPSAQIPAGTTVI 372

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
             ++  G  +S+ EARR +    + +NN   +       +          +  GKK    
Sbjct: 373 QALIDTGLVSSSGEARRAITQGGVYVNNV--AVGDAAAVVDALLHGRFAVIRRGKKTLAG 430

Query: 414 CHLC 417
             + 
Sbjct: 431 VTVA 434


>gi|255543457|ref|XP_002512791.1| tyrosyl-tRNA synthetase, putative [Ricinus communis]
 gi|223547802|gb|EEF49294.1| tyrosyl-tRNA synthetase, putative [Ricinus communis]
          Length = 492

 Score =  451 bits (1162), Expect = e-125,   Method: Composition-based stats.
 Identities = 149/431 (34%), Positives = 236/431 (54%), Gaps = 20/431 (4%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           + + + IL ERG +  +++   L   CS   +  Y G+D TA SLH G+L  +++L W Q
Sbjct: 64  RQNVVDILEERGLLESVTS-DNLRSACSISTLKVYCGFDPTAESLHLGNLIGIIVLSWFQ 122

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + GHK  +L+GG T  IGDPS +   R  +    +++NI  I    +         ++ +
Sbjct: 123 RCGHKAFALIGGATGRIGDPSGKSSERPELDLDSLEKNIIGISNTLTRIFNADVNLSNPI 182

Query: 125 ML-NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           ++ NN  W   +K +D L+++G +  V  M+  ESV+ RL+ EQ +S+ EF+Y +LQ +D
Sbjct: 183 VVLNNYDWWKDVKLLDFLKQVGRYARVGTMIGKESVKKRLESEQGMSYTEFSYQLLQGFD 242

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP----KLFALTSPLLTTASGTKMGK 239
           F+ L KN    +++GGSDQWGNI  G +L  ++  P    + + LT PLL  + GTK GK
Sbjct: 243 FLHLFKNKGVNVEIGGSDQWGNITAGTELIRKILQPEDGAEAYGLTFPLLLKSDGTKFGK 302

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEIN 296
           +  GAIWL+    SPY F+QY+ +I D DV+ F K LT L + EI   +R  K  G   N
Sbjct: 303 SEDGAIWLSPSFLSPYKFYQYFFSIADDDVIRFLKILTFLELDEIAELEREMKRPGYVPN 362

Query: 297 EAKKIIATEITTMVHGREEAEKAATAAMECFDMSI----------HSQHMPTISISKDEV 346
            A++ +A E+T  VHG++   +A  A       +            ++ +P+ S++ D+V
Sbjct: 363 TAQRRLAEEVTRFVHGQDGLLEAIKATEALRPGAETKLDWKTIEGIAEDVPSCSLAYDQV 422

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
              + L+ L V AG   S + ARR LK   + +NNS + +E  +++ QD      + LS 
Sbjct: 423 -LNLSLVDLSVTAGLIDSKSAARRLLKQGGLYLNNSRVDSESKRVESQDIVEGKVLLLSA 481

Query: 407 GKKNHIICHLC 417
           GKKN +I  + 
Sbjct: 482 GKKNKVIVRIS 492


>gi|327404296|ref|YP_004345134.1| Tyrosyl-tRNA synthetase [Fluviicola taffensis DSM 16823]
 gi|327319804|gb|AEA44296.1| Tyrosyl-tRNA synthetase [Fluviicola taffensis DSM 16823]
          Length = 426

 Score =  451 bits (1162), Expect = e-125,   Method: Composition-based stats.
 Identities = 144/428 (33%), Positives = 229/428 (53%), Gaps = 22/428 (5%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
            K + +  L  RG +  I     L+    + + + Y+G+D T+ SLH G+L  +MLL   
Sbjct: 1   MKKNVIEELRWRGMVQDIMP--GLEEQLLKEMTSGYVGFDPTSDSLHVGNLLPIMLLKHF 58

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q  GHKP +L+GG T ++GDPS +   R ++  + +  NI  ++     F+ +  G+  A
Sbjct: 59  QLAGHKPYALVGGATGMVGDPSGKSAERNLLDEKTLNHNIAAVQNQLRQFLDFEEGENKA 118

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            ++NN  W+    +++ +R++G   +VN M + +SV+ R+  E  +SF EF+Y ++Q YD
Sbjct: 119 ELVNNFDWMRHFSFLEFIRDVGKHITVNYMSAKDSVKKRV--ETGISFTEFSYQLIQGYD 176

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ L KN + ++Q GGSDQWGNI  G +L  ++ + + +A T PLLT A G K GKT SG
Sbjct: 177 FLHLYKNNNVKVQFGGSDQWGNITTGTELVRKIASGEAYAFTCPLLTKADGGKFGKTESG 236

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKI 301
            +WL+ E TSPY F+Q+W N  DAD     +  T     EI+ + K       +   +K 
Sbjct: 237 TVWLDPEKTSPYAFYQFWLNASDADATKLIRFYTLKTKEEIEAIEKEHNEAPHLRILQKA 296

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDEVS 347
           IA E+T  VHG+E  + A  A+   F  S                   +P  ++ + E+ 
Sbjct: 297 IAEEVTIRVHGKEALDMAIAASNILFGKSTSEDLKKLSNDTFLSIFDGVPMATVKRSELI 356

Query: 348 RGMGLLTLIV-KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G+ ++ L+  K GF  S  EA+R LK+NAI +N   +++  L +   D  +   I L  
Sbjct: 357 EGISIVDLLASKTGFLPSNGEAKRELKANAISLNKDKVAD-GLLVGPSDLINDKFILLGK 415

Query: 407 GKKNHIIC 414
           GKKN+ I 
Sbjct: 416 GKKNNYIV 423


>gi|315499743|ref|YP_004088546.1| tyrosyl-tRNA synthetase [Asticcacaulis excentricus CB 48]
 gi|315417755|gb|ADU14395.1| tyrosyl-tRNA synthetase [Asticcacaulis excentricus CB 48]
          Length = 440

 Score =  451 bits (1162), Expect = e-125,   Method: Composition-based stats.
 Identities = 207/416 (49%), Positives = 276/416 (66%), Gaps = 3/416 (0%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M +FKSDFL++LSERGFIHQ ++   LD L S G +T YIGYD TASSLHAGHL Q+MLL
Sbjct: 25  MTSFKSDFLNVLSERGFIHQCTDAEALDTLASAGPITGYIGYDATASSLHAGHLVQIMLL 84

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
           +WLQKTG+KPI LMGGGT+ +GDP+F+D  R ++  ++IQ N+  IK +F+SF+ +G G 
Sbjct: 85  YWLQKTGNKPIVLMGGGTTKVGDPTFKDTQRPLLTDEQIQSNMNGIKSVFNSFLTFGDGA 144

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           TDA+M+NN+ WL    YI+ LR  G+ F++NRML+F+SV+ RL+REQ ++FLEFNYM++Q
Sbjct: 145 TDAIMVNNDDWLSGFGYIEFLRTFGTHFTINRMLTFDSVKLRLEREQPMTFLEFNYMLMQ 204

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           A DF EL   Y+C LQMGGSDQWGNI+ G++L  RL     F LT+PLLTTASG KMGKT
Sbjct: 205 AVDFRELNSTYNCVLQMGGSDQWGNIVNGVELTRRLNQKAAFGLTTPLLTTASGAKMGKT 264

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           + GA+WLN +  SPY++WQYWRN +DADV  F +  T LPM EI R+  LQG EINEAKK
Sbjct: 265 VGGAVWLNADALSPYDYWQYWRNTEDADVGKFMRLFTDLPMDEIRRLEALQGAEINEAKK 324

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSI-HSQHMPTISISKDEVSRGMGLLTLIVKA 359
           I+A   T MVHG   A  A   A + F+       ++  +   + +          +   
Sbjct: 325 ILADAATRMVHGEAAAATARDTAQKAFEQGTRLVSNVVEMDWQQGQ-EFTYRTPEALAAK 383

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            F  S  +A+R + +N IKIN    + +KL  + +         L  GKK  ++  
Sbjct: 384 AFNLSIKDAKRSIANNEIKINGEHPATDKLYKRSEVNAEDAAFVLQRGKKT-VLVK 438


>gi|317154791|ref|YP_004122839.1| tyrosyl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2]
 gi|316945042|gb|ADU64093.1| tyrosyl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2]
          Length = 427

 Score =  451 bits (1161), Expect = e-125,   Method: Composition-based stats.
 Identities = 150/425 (35%), Positives = 226/425 (53%), Gaps = 19/425 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L  RG I+Q+S+  ++    S      Y G+D TA SLH G+L  L+ L  +++ 
Sbjct: 2   NIYDELKWRGLINQVSDEEKVRTYLSNQGAVMYCGFDPTAESLHVGNLVPLLCLARMKRA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH PI L+GG T +IGDPS +D+ R + R +++    EKIKG    F +  TG     + 
Sbjct: 62  GHNPIFLLGGATGLIGDPSGKDKERELSRREDLDVRSEKIKGQVRRFFERNTGDRP-EIT 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYDFV 185
           NN  W   +  I+LLR++G +F+VN ML  ESV+ R+ R+   +S+ EF+YMILQ YD+ 
Sbjct: 121 NNYIWTKDLTAIELLRDVGKYFTVNWMLQKESVKGRIDRDDVGISYTEFSYMILQGYDYY 180

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERL------KTPKLFALTSPLLTTASGTKMGK 239
            L K   CRLQ+GG DQWGNI  G +L  +       +  ++FALT PL+TTASG K GK
Sbjct: 181 HLFKTKGCRLQLGGGDQWGNITAGCELVRKKCAQEDGEQEEVFALTFPLITTASGKKFGK 240

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINE 297
           +  GAI+LN ++T PY F+Q++ N DD DV+ F K  T L   EI+ + +   +   +  
Sbjct: 241 SEKGAIFLNPDITPPYAFYQFFINTDDRDVIKFLKLFTFLDQDEINALERELAEAPHLRS 300

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV--------SRG 349
           A+K +A E+T MVHG+ E ++   A    F         P    +  E         S  
Sbjct: 301 AQKRLAEEVTRMVHGQPELDRVMAATEALFGEGSLKGVDPATLRAALETAPHCHYAPSNV 360

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
             L  +++    A S  +AR+ + S  + IN   +      +   DF     + +  GKK
Sbjct: 361 PDLPQMLLDLQLAASKGQARKDIASGGVYINGERVE-ADQGVAEADFIGGELLIIRKGKK 419

Query: 410 NHIIC 414
           ++ + 
Sbjct: 420 HYGLV 424


>gi|329898102|ref|ZP_08272308.1| Tyrosyl-tRNA synthetase cluster 1 [gamma proteobacterium IMCC3088]
 gi|328920943|gb|EGG28371.1| Tyrosyl-tRNA synthetase cluster 1 [gamma proteobacterium IMCC3088]
          Length = 433

 Score =  451 bits (1161), Expect = e-125,   Method: Composition-based stats.
 Identities = 152/430 (35%), Positives = 227/430 (52%), Gaps = 21/430 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L  RG + QI+         ++   T Y G+D TA SLH G L  L++L   Q+ G
Sbjct: 5   LLEDLKARGLVFQIAGEERFVDWLNEKPRTLYCGFDPTADSLHIGSLVPLLMLRRFQEAG 64

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+PI+L+GG T +IGDPSF+   R++     +   ++K+K   S FI +    + A++ N
Sbjct: 65  HRPIALVGGATGLIGDPSFKATERQLNTPDVVAGWVDKLKAQVSRFIAFDDTASSAMVAN 124

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDFVE 186
           N  W   +  +  LR+IG  FSVN M+  ESV+ R++RE   +SF EF+Y ILQ+ DF E
Sbjct: 125 NLDWTQGLDVLTFLRDIGKHFSVNSMIQKESVKQRIEREGSGISFTEFSYSILQSLDFAE 184

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + Y+C LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT SG IW
Sbjct: 185 LYQRYECGLQIGGSDQWGNITGGIDLARRLHGAQVFGLTMPLITKADGTKFGKTESGTIW 244

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIAT 304
           L+   TSPY F+Q+W    DADV  F +  T LP+ +I R+ +         +A+ ++A 
Sbjct: 245 LDASKTSPYAFYQFWLGTADADVYKFLRYFTFLPVEQIARIEEEDKTAQGRPQAQAVLAE 304

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHS-----------QHMPTISISKDEVSRGMGLL 353
           E+T +VHG++    A       F  S+               +PT +I++ E+     L 
Sbjct: 305 EVTRLVHGQDGLGAALRITEALFSGSLSDLNADDLAQLAQDGLPTTNITRGEL--PATLT 362

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSII-----SNEKLQIKLQDFDSTGNIKLSFGK 408
            L+       S  +A+  L  +A+ +N + +     +N +         +     +  GK
Sbjct: 363 QLLSDVEAVASGKQAKDALSRSAVTVNGAALGVDVNANPEAWFPADRALAGKFYLVKVGK 422

Query: 409 KNHIICHLCG 418
           K H +  + G
Sbjct: 423 KKHHLFVISG 432


>gi|260774198|ref|ZP_05883113.1| tyrosyl-tRNA synthetase [Vibrio metschnikovii CIP 69.14]
 gi|260611159|gb|EEX36363.1| tyrosyl-tRNA synthetase [Vibrio metschnikovii CIP 69.14]
          Length = 420

 Score =  451 bits (1161), Expect = e-125,   Method: Composition-based stats.
 Identities = 152/418 (36%), Positives = 225/418 (53%), Gaps = 13/418 (3%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           FL  L++RG + Q +   EL  L ++   T Y G+D TA SLH GHL  L++L   Q  G
Sbjct: 6   FLHELAQRGLMAQSTPIDELSELLNR-PQTLYCGFDPTAGSLHIGHLVPLLMLKRFQDAG 64

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H  I+L+GG T +IGDPSF+   R +  S  +Q+ +  +       +     +     +N
Sbjct: 65  HTAIALIGGATGMIGDPSFKAAERTLNPSTTVQQWVNDLAQQIDQVMTPHMTQPLLC-VN 123

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDFVE 186
           N  W+  I  ID  R+IG  FSVN M++ ESV+ RL R +Q +SF EF+Y +LQ++DF  
Sbjct: 124 NADWITKINVIDFFRDIGKHFSVNTMINRESVKQRLSRPDQGISFTEFSYSLLQSFDFAH 183

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + Y CRLQ+GG+DQWGNI+ GIDL  RL    +  LT PL+T + GTK GKT SGAIW
Sbjct: 184 LNQQYQCRLQIGGNDQWGNIVSGIDLTRRLNNQVVHGLTLPLITKSDGTKFGKTESGAIW 243

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE--INEAKKIIAT 304
           L+   TSPY F+Q+W N DDADV  F +  T L +S+I+ + +         +A++++A 
Sbjct: 244 LDSNKTSPYAFYQFWLNTDDADVYRFLRYYTFLSLSDIETIEQQDKASTGKPQAQQVLAE 303

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRGMGLLTLIVK 358
           ++T  VHG E    A       F   ++   +  +       +   +      L+ L++ 
Sbjct: 304 QLTRFVHGEEGLLSAQRITQALFRGEMNQLSLAELQQLELDGLPCYQTDNTDSLIELMLV 363

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
              A+S  +AR  L + AI+IN   +  E+ Q+  Q         +  GKK   +  L
Sbjct: 364 TQLASSKRQAREWLANGAIRINGERV--EQEQLSSQFALFDRYYVIQRGKKQFALAKL 419


>gi|297180971|gb|ADI17174.1| tyrosyl-tRNA synthetase [uncultured gamma proteobacterium
           HF0070_08D07]
          Length = 425

 Score =  451 bits (1161), Expect = e-125,   Method: Composition-based stats.
 Identities = 152/417 (36%), Positives = 237/417 (56%), Gaps = 11/417 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
             L  LSERG + Q+S+   L     +  V  Y G+D TA SLH G L  L+ L   Q+ 
Sbjct: 7   GILDELSERGLVAQVSDETGLREHLKKRRV-VYCGFDPTADSLHVGSLVPLIALNRFQRA 65

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKPI L+GG T +IGDPSFR + R ++ S  +++ +  ++     F+ + TG+  AL++
Sbjct: 66  GHKPILLLGGATGLIGDPSFRSDERLLIDSDVVEKRVVSLRKQVEPFLSF-TGENSALIV 124

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK-REQSLSFLEFNYMILQAYDFV 185
           NN  W   +  ID LR+IG +FS+N+M+  ++V+ RL    Q +SF EF YMILQ+ DF+
Sbjct: 125 NNLDWSNKVLLIDFLRDIGKYFSINKMIQRDAVKPRLDAEGQGISFTEFTYMILQSMDFL 184

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           ELA + +C +Q+GGSDQWGN++ GIDL  R  + + +ALT PL+T A GTK GK+ +GA+
Sbjct: 185 ELAVSNECTIQIGGSDQWGNMVSGIDLIRRKLSLESYALTLPLITKADGTKFGKSEAGAV 244

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIA 303
           WL +  TSPY+F+Q+W N  DADV  F K  T +P  EI    +   +  E   A++++A
Sbjct: 245 WLERSKTSPYSFYQFWLNTSDADVEKFLKFFTFIPSEEIVETIQRTKEKPEDRIAQRVLA 304

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTLIV 357
             +T  VHG ++   +   +   F  +         + +    +       G GLL+ +V
Sbjct: 305 DHMTQFVHGEKDRLASRRISSALFSENFDGLEQGDLEQLLQDGLPSRRCKSGEGLLSTMV 364

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +  A S  EAR+ +    I +N S+I++  + +  +       + L  GKK++++ 
Sbjct: 365 SSNLAKSNGEARKLIHGRGISVNGSVITDPSISLDFEGALYGQYLLLKKGKKSYVLL 421


>gi|238855572|ref|ZP_04645874.1| tyrosine--tRNA ligase [Lactobacillus jensenii 269-3]
 gi|260664764|ref|ZP_05865615.1| tyrosyl-tRNA synthetase [Lactobacillus jensenii SJ-7A-US]
 gi|282932742|ref|ZP_06338150.1| tyrosine--tRNA ligase [Lactobacillus jensenii 208-1]
 gi|313472673|ref|ZP_07813162.1| tyrosine--tRNA ligase [Lactobacillus jensenii 1153]
 gi|238831789|gb|EEQ24124.1| tyrosine--tRNA ligase [Lactobacillus jensenii 269-3]
 gi|239529365|gb|EEQ68366.1| tyrosine--tRNA ligase [Lactobacillus jensenii 1153]
 gi|260561247|gb|EEX27220.1| tyrosyl-tRNA synthetase [Lactobacillus jensenii SJ-7A-US]
 gi|281303152|gb|EFA95346.1| tyrosine--tRNA ligase [Lactobacillus jensenii 208-1]
          Length = 420

 Score =  451 bits (1161), Expect = e-125,   Method: Composition-based stats.
 Identities = 141/423 (33%), Positives = 212/423 (50%), Gaps = 17/423 (4%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQ-GVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           K D L  L  RG I+Q ++   L    ++   +  Y G D T  SLH GHL   M+L   
Sbjct: 3   KFDILEDLKWRGAINQQTDEEGLKKYLAEHDDLALYCGTDPTGDSLHIGHLIPFMILKRF 62

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q  G+ P+ ++GGGT  IGDPS R   R +   +++  N   +            G  + 
Sbjct: 63  QLAGYHPVIIIGGGTGSIGDPSGRKTERVLQSDEQVHHNEVALTNQMKKLF----GTENF 118

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            ++NN  WL  +  ++ LR+ G  F +N ML+ + V SRL  E  +SF EF Y ILQ  D
Sbjct: 119 QIVNNRDWLGKMSLLEFLRDYGKLFQINNMLAKDVVASRL--ENGISFTEFTYQILQGID 176

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKLFALTSPLLTTASGTKMGKTL 241
           F  L ++Y  ++Q+GGSDQWGNI  GIDL  RL+      F LT PL+  A GTK GK+ 
Sbjct: 177 FYILNRDYGVQMQIGGSDQWGNITSGIDLIHRLEGNDRPAFGLTIPLMLKADGTKFGKSA 236

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAK 299
            GA+WL+ E TSPY F+Q+W N DD DVV + K  T L   EI+ +A+    E    EA+
Sbjct: 237 GGAVWLDPEKTSPYEFYQFWINQDDRDVVKYLKYFTFLSHEEIEALAEKVKTEPWKREAQ 296

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRGMGLL 353
           K +A E+T  VHG    ++A       F  ++    +  I        S +  +    L+
Sbjct: 297 KTLAAEVTKFVHGEAGLKEAQMITDALFSGNVKDLSVKQIEQALKNAPSAESTNEKQNLV 356

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
             +V     +S  +AR  +++ AI +N   I + + ++          + +  GK+ + +
Sbjct: 357 EFLVDTKIESSKRQAREDIQNGAIYVNGDKIQDLEFEVDPSASFEGKYVIIRKGKRKYTL 416

Query: 414 CHL 416
             +
Sbjct: 417 VTI 419


>gi|329768070|ref|ZP_08259580.1| tyrosyl-tRNA synthetase [Gemella haemolysans M341]
 gi|328838338|gb|EGF87948.1| tyrosyl-tRNA synthetase [Gemella haemolysans M341]
          Length = 417

 Score =  451 bits (1161), Expect = e-125,   Method: Composition-based stats.
 Identities = 136/423 (32%), Positives = 225/423 (53%), Gaps = 22/423 (5%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S  L  L  R  ++Q ++   +  L  +  V+ Y G D T +SLH GHL   + L   Q+
Sbjct: 2   SKLLEDLKYRDLVYQQTDEEGIKELLEKESVSIYCGTDPTGNSLHIGHLLPFLTLKRFQQ 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP+ L+GGGT IIGDPS R E R++   + I++N  +++G   +  +   G  +   
Sbjct: 62  HGHKPVILVGGGTGIIGDPSGRSEERQLQSLEVIEDNASRLEGQLRNIFR---GDDNIEF 118

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  WL  +  I+ LR+ G   ++N +L+ +S+ SRL     LSF EF+Y ILQ  D+ 
Sbjct: 119 VNNRDWLGKLSMIEFLRDYGKLVNINYLLAKDSISSRLDN--GLSFTEFSYTILQGIDYA 176

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERL-KTPKLFALTSPLLTTASGTKMGKTLSGA 244
            L ++++ +LQ+GGSDQWGNI  G+++  +L    + +  T PL+  + GTK GK+  GA
Sbjct: 177 YLNEHHNVKLQIGGSDQWGNITTGLEIMRKLRGDVEAYGFTIPLMLKSDGTKFGKSTGGA 236

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKII 302
           +WL+ E T+PY F+Q+W N  D +VVS  K+ T L   +I+ + +   KE     A+K +
Sbjct: 237 VWLDPEQTTPYEFYQFWFNTADTEVVSALKKFTFLEKDQIEALRESSEKEPHLRLAQKAL 296

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGL 352
           A E+  +VHG +  E A       F  +I            + MP   + K E      +
Sbjct: 297 AEEMVKIVHGEKALESALNITKALFSGNIKELTHDELKEAVKGMPKSELEKKEY----NI 352

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           +  +V++    S  +AR  + + A+ +N   +++ +  ++ +D    G   L  GKK ++
Sbjct: 353 VDFLVESNLVQSKRQAREDVNNGAVYVNGDKVTDLEYVVEAKDRLEDGFTVLRRGKKKYL 412

Query: 413 ICH 415
           +  
Sbjct: 413 LVE 415


>gi|86157471|ref|YP_464256.1| tyrosyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-C]
 gi|97197467|sp|Q2IPT7|SYY_ANADE RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|85773982|gb|ABC80819.1| tyrosyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 420

 Score =  451 bits (1161), Expect = e-124,   Method: Composition-based stats.
 Identities = 150/423 (35%), Positives = 230/423 (54%), Gaps = 19/423 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + L  L  R  +H  +    L    +QG +T Y+G+D TA SLH GHL  +M L WLQ+ 
Sbjct: 3   NLLEALVPRSLVHDQTP--GLQARLAQGPITGYVGFDPTADSLHVGHLLAVMSLAWLQRC 60

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           G  PI ++GGGT ++GDPS +   R ++  +EI  N+  I+     F+ +  G+  A + 
Sbjct: 61  GGTPIIVVGGGTGMVGDPSGKRSERPVLSVEEIDRNVAAIRAQLERFVSF-EGQNAARVR 119

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL SI  ++ LR++G  F+VN ML+ +SV+ R++    +SF EF+Y ++QAYDF  
Sbjct: 120 NNADWLRSIGLMEFLRDVGKHFTVNYMLAKDSVKGRMES--GISFTEFSYQLIQAYDFWH 177

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L     C LQMGGSDQWGNI  G +L  R     +  LT PLLTTASGTK GKT  GA+W
Sbjct: 178 LFHAERCELQMGGSDQWGNITAGAELVSRKDGASVHGLTFPLLTTASGTKFGKTEGGAVW 237

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIAT 304
           L+   TSPY F+Q+W N DD DV    K  T L + EI  +   Q ++     A++ +A 
Sbjct: 238 LDPARTSPYKFFQFWLNTDDRDVERLLKFFTFLSLDEIAALLAEQARDPGKRPAQRRLAE 297

Query: 305 EITTMVHGREEAEKAATAAMECFDM-----------SIHSQHMPTISISKDEVSRGMGLL 353
           ++T  VHG +       A+   F              + +  +P+ +++ DE++  + + 
Sbjct: 298 DVTARVHGPDVTRSVIEASRILFGGTDLRAAGVDVLDVLAGEIPSATVTGDELAA-LTVA 356

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            L+VK G A S  E RR +      +N +++ +   ++   +  + G   L  GK+N+ +
Sbjct: 357 DLLVKVGLAASKGEVRRGVAGRGFSLNGAVLESGDAKVAAGELLAGGYALLQKGKRNYAL 416

Query: 414 CHL 416
             +
Sbjct: 417 VKV 419


>gi|256851956|ref|ZP_05557343.1| tyrosyl-tRNA synthetase [Lactobacillus jensenii 27-2-CHN]
 gi|260661474|ref|ZP_05862387.1| tyrosyl-tRNA synthetase [Lactobacillus jensenii 115-3-CHN]
 gi|282931937|ref|ZP_06337404.1| tyrosine--tRNA ligase [Lactobacillus jensenii 208-1]
 gi|256615368|gb|EEU20558.1| tyrosyl-tRNA synthetase [Lactobacillus jensenii 27-2-CHN]
 gi|260547929|gb|EEX23906.1| tyrosyl-tRNA synthetase [Lactobacillus jensenii 115-3-CHN]
 gi|281303938|gb|EFA96073.1| tyrosine--tRNA ligase [Lactobacillus jensenii 208-1]
          Length = 420

 Score =  451 bits (1160), Expect = e-124,   Method: Composition-based stats.
 Identities = 142/423 (33%), Positives = 212/423 (50%), Gaps = 17/423 (4%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQ-GVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           K D L  L  RG I+Q ++   L    ++   +  Y G D T  SLH GHL   M+L   
Sbjct: 3   KFDILEDLKWRGAINQQTDEEGLKKYLAEHDDLALYCGTDPTGDSLHIGHLIPFMILKRF 62

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q  G+ P+ ++GGGT  IGDPS R   R +   +++  N   +            G  + 
Sbjct: 63  QLAGYHPVIIIGGGTGSIGDPSGRKTERVLQSDEQVHHNEVALTNQMKKLF----GTENF 118

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            ++NN  WL  +  ++ LR+ G  F +N ML+ + V SRL  E  +SF EF Y ILQ  D
Sbjct: 119 QIVNNRDWLGKMSLLEFLRDYGKLFQINNMLAKDVVASRL--ENGISFTEFTYQILQGID 176

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKLFALTSPLLTTASGTKMGKTL 241
           F  L ++Y  ++Q+GGSDQWGNI  GIDL  RL+      F LT PL+  A GTK GK+ 
Sbjct: 177 FYILNRDYGVQMQIGGSDQWGNITSGIDLIHRLEGNERPAFGLTIPLMLKADGTKFGKSA 236

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAK 299
            GA+WL+ E TSPY F+Q+W N DD DVV + K  T L   EID +A+    E    EA+
Sbjct: 237 GGAVWLDPEKTSPYEFYQFWINQDDRDVVKYLKYFTFLSHEEIDALAEKVKNEPWKREAQ 296

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRGMGLL 353
           K +A E+T  VHG    E+A       F  ++    +  I        S +  +    L+
Sbjct: 297 KTLAAEVTKFVHGEAGLEEAQMITDALFSGNVKELSVKQIEQALKNAPSAESSNEKKNLV 356

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
             +V     +S  +AR  +++ AI +N + +   + ++          + +  GK+ + +
Sbjct: 357 DFLVDTKIESSKRQAREDIQNGAIYVNGNKVQELEFEVDPSASFDGKYVIIRKGKRKYTL 416

Query: 414 CHL 416
             +
Sbjct: 417 VTI 419


>gi|308235812|ref|ZP_07666549.1| tyrosyl-tRNA synthetase [Gardnerella vaginalis ATCC 14018]
 gi|311114474|ref|YP_003985695.1| tyrosine--tRNA ligase [Gardnerella vaginalis ATCC 14019]
 gi|310945968|gb|ADP38672.1| tyrosine--tRNA ligase [Gardnerella vaginalis ATCC 14019]
          Length = 439

 Score =  451 bits (1160), Expect = e-124,   Method: Composition-based stats.
 Identities = 137/421 (32%), Positives = 217/421 (51%), Gaps = 19/421 (4%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +     L  RG I Q ++ ++L        +T Y GYD TA+SLH G+L QL+ +  LQ 
Sbjct: 13  ASLFEELKWRGLISQSTDEQQLAQALDGEPLTYYCGYDPTAASLHIGNLVQLINMRHLQA 72

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH PI+L+GG T +IGDP    E R +     +    E+++      +    G+     
Sbjct: 73  AGHHPIALVGGATGLIGDPRQSGE-RTLNSKDIVAGWAERLRKQIGRIL-PLDGENPVRF 130

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           ++N  W+  +  ID LR++G  F V  MLS + V  RL  ++ +SF EF+Y +LQ  DF+
Sbjct: 131 VSNYDWVSKMSAIDFLRDVGKNFRVGTMLSKDIVARRLNSDEGISFAEFSYQVLQGNDFL 190

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L  NY+  LQ+GGSDQWGN+  G+DL  +++   +   TSP++T   G K GK+   A+
Sbjct: 191 YLFDNYNVTLQLGGSDQWGNLTSGMDLIRKVRGASVHVFTSPIITDNQGRKFGKSEGNAM 250

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIA 303
           WL+  M SPY F+Q+W N  D +VV   K  T LP SEI+R+ K   ++    EA++++A
Sbjct: 251 WLDPTMLSPYRFYQFWFNQPDDEVVKLLKAFTFLPKSEIERLNKQIQEDPGSREAQRVLA 310

Query: 304 TEITTMVHGREEAEKAATAAMECFDMS----IHSQHMPTI-----------SISKDEVSR 348
            E+T+ VHG +   +A  A+   F       I  Q +              S+   + + 
Sbjct: 311 WEVTSFVHGEDVTNQAIAASSALFGKGDLDAIDEQTLEAALDGVKVKAQDGSLEFAKANS 370

Query: 349 GMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGK 408
           G  ++   V AG   + +EARR +++  + +NN+ + +    +    F       +  GK
Sbjct: 371 GDRVVEAAVAAGLFRTISEARRAIEAGGLYVNNNRVDSVDDILNDNSFLHGRFALIRRGK 430

Query: 409 K 409
           K
Sbjct: 431 K 431


>gi|332667701|ref|YP_004450489.1| Tyrosyl-tRNA synthetase [Haliscomenobacter hydrossis DSM 1100]
 gi|332336515|gb|AEE53616.1| Tyrosyl-tRNA synthetase [Haliscomenobacter hydrossis DSM 1100]
          Length = 426

 Score =  451 bits (1160), Expect = e-124,   Method: Composition-based stats.
 Identities = 151/425 (35%), Positives = 226/425 (53%), Gaps = 20/425 (4%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
            DFL  L  RG +H  S    ++   S G + AYIG+D TA SL  G+  Q+MLL   Q 
Sbjct: 2   KDFLEELEWRGMLH--SKIEGIEEKLSAGKIAAYIGFDPTAPSLTIGNYVQIMLLKLFQL 59

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
           +GH+PI LMGG T  IGDPS +D+ R +  + E+ +N+      F   + +  G   A+M
Sbjct: 60  SGHQPIVLMGGATGRIGDPSGKDKERELKTTDELDDNLAHQTAQFKRLLDFEGGDNPAIM 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  +  ++  +D LR++G   +VN ML  +SV++RL+    +SF EF+Y +LQ YDF 
Sbjct: 120 VNNLDFYRNMNVLDFLRDVGKTLTVNYMLQKDSVQNRLES--GISFTEFSYQLLQGYDFQ 177

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L K Y C LQMGGSDQWGNI  G +   R  + K +A+T+PLLT A GTK GK+ +G I
Sbjct: 178 CLYKQYGCILQMGGSDQWGNITAGTEFIRRNLSEKAYAITTPLLTKADGTKFGKSTAGNI 237

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
           W++ +MTSPY F+Q+W N DDAD+  F +  T     EI+   +    +  E K+++A E
Sbjct: 238 WIDPKMTSPYKFYQFWINADDADIPKFTRYFTLHAKEEIEAREREFASDPRELKRLLAEE 297

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIH---------------SQHMPTISISKDEVSRGM 350
           +T  +HG E  +     +   F  +                 S  +P+  ++K   + G 
Sbjct: 298 LTKRIHGEEAYQSVLKVSELLFGRNADRDMLLSLSAEELETVSSEIPSFQVTKALFAAGA 357

Query: 351 GLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
            +  L+        S  E RR ++ NAI +N   I++ +  I  +       + +  GKK
Sbjct: 358 NISDLLADHTQILASKGEVRRAIQGNAISVNKDKINSHEALIPSESLLHGKYLMVENGKK 417

Query: 410 NHIIC 414
           N  I 
Sbjct: 418 NKYIL 422


>gi|294791514|ref|ZP_06756671.1| tyrosine--tRNA ligase [Scardovia inopinata F0304]
 gi|294457985|gb|EFG26339.1| tyrosine--tRNA ligase [Scardovia inopinata F0304]
          Length = 442

 Score =  451 bits (1160), Expect = e-124,   Method: Composition-based stats.
 Identities = 139/421 (33%), Positives = 223/421 (52%), Gaps = 21/421 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L  RG ++Q ++ ++L    +   +T Y G+D TA+SLH G+L QL+++  LQ+ G
Sbjct: 15  LLEELEWRGLVNQSTDRQQLAAALNGNPLTFYAGFDPTAASLHIGNLVQLVVMRHLQEAG 74

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H PI+L+GG T +IGDP    E R +     ++    +++   S F+    G      ++
Sbjct: 75  HHPIALVGGATGLIGDPRQSGE-RTLNSKSVVEAWARRLQAQISRFL-VTDGSNPVRFVS 132

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W  S+  ID LR++G  F +  MLS + V  RL  ++ +SF EF+Y +LQ  D++ L
Sbjct: 133 NYDWTASMSVIDFLRDVGKNFRLGTMLSKDIVARRLNSQEGISFAEFSYQVLQGNDYLHL 192

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
                  LQ+GG+DQWGN++ G+DL  +++  ++  +TSP++T + G K GK+  GAIWL
Sbjct: 193 YDECGVTLQIGGADQWGNLVSGLDLIRKVRGVQVNVMTSPIITDSQGKKFGKSEGGAIWL 252

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIATE 305
           +  M SPY F+Q+W N  D  V+   K  T LP  EI+R+           EA++ +A E
Sbjct: 253 DASMLSPYRFYQFWFNQPDDQVIKLLKYFTFLPKEEIERLEIEVESHPGAREAQRTLAWE 312

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHS-QHMPTISISKD-------------EVSR--- 348
           +T+ VHG++ A++A  AA   F     S + +    +                E ++   
Sbjct: 313 VTSFVHGQDAAQEAIDAAAALFGRGQVSLEDIDQSVLEAALDGLKVSGQTGQKEFAQARV 372

Query: 349 GMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGK 408
           GM +    V AG   S +EAR+ + S  I INN  + + + +++  DF       L  GK
Sbjct: 373 GMRITQAAVAAGLVKSQSEARKTIASGGIYINNKRVEDVEQELEQSDFLHNRFALLRRGK 432

Query: 409 K 409
           K
Sbjct: 433 K 433


>gi|297181019|gb|ADI17220.1| tyrosyl-tRNA synthetase [uncultured delta proteobacterium
           HF0070_10I02]
          Length = 398

 Score =  450 bits (1159), Expect = e-124,   Method: Composition-based stats.
 Identities = 157/404 (38%), Positives = 244/404 (60%), Gaps = 14/404 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L+ RGFI   ++   L+   + G +T Y+G+D T  SLH GHL  +M +  LQ+ 
Sbjct: 2   NAIDTLTARGFIKTHTDLDALNEAMAAGPITFYVGFDPTGDSLHIGHLLPVMAMAHLQQA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKPI ++GGGT+++GDPS +D++R ++  ++I+ N+E ++  F  F++         ++
Sbjct: 62  GHKPIVVLGGGTAMVGDPSGKDKTREILTPEKIRSNLEAMRVQFGRFLEL----ERCEVV 117

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           +N  WL  + YI  LR++G  FSVN+M+S E +R RL+R Q LSF+EFNY +LQ+YDF+ 
Sbjct: 118 DNAEWLMGLGYIHFLRDVGKHFSVNKMMSAEGIRQRLERNQGLSFIEFNYHLLQSYDFLV 177

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L   Y C LQ+GG DQW NI+ G++L  R +     ALT PLL TA G KMGKT  GA W
Sbjct: 178 LHDKYGCTLQLGGDDQWFNILGGVELIRRERQQSAHALTIPLLQTADGKKMGKTEKGATW 237

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           L+    SPY+++QYW N+ DADV  F +  T +P+ EI ++  L+G +I +AK+++A E 
Sbjct: 238 LDPNQCSPYDYFQYWVNVHDADVGRFLRLYTFMPLDEIAKLEALEGAQIRDAKQVLAFEA 297

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
           T + HG+EEAEKA  AA   F   + +  MP+ ++        + +L  +V  G   S  
Sbjct: 298 TALAHGKEEAEKARAAAQAAFSGGVSA-DMPSHAV-----GFPVNILDALVATGLCKSKG 351

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
           +ARR ++  A+++     ++   Q+   + +      L  GKKN
Sbjct: 352 DARRQIQQGAVRLG----ADRDQQVIDTNHNLDAETVLWKGKKN 391


>gi|297243606|ref|ZP_06927537.1| tyrosyl-tRNA synthetase [Gardnerella vaginalis AMD]
 gi|296888357|gb|EFH27098.1| tyrosyl-tRNA synthetase [Gardnerella vaginalis AMD]
          Length = 439

 Score =  450 bits (1159), Expect = e-124,   Method: Composition-based stats.
 Identities = 135/421 (32%), Positives = 213/421 (50%), Gaps = 19/421 (4%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +     L  RG I Q ++ ++L        +T Y GYD TA+SLH G+L QL+ +  LQ 
Sbjct: 13  ASLFEELKWRGLISQSTDEQQLAQALDGEPLTYYCGYDPTAASLHIGNLVQLINMRHLQA 72

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH PI+L+GG T +IGDP    E R +     +    E+++      +    G+     
Sbjct: 73  AGHHPIALVGGATGLIGDPRQSGE-RTLNSKDIVAGWAERLRKQIGRIL-PLDGENPVRF 130

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           ++N  W+  +  ID LR++G  F V  MLS + V  RL  ++ +SF EF+Y +LQ  DF+
Sbjct: 131 VSNYDWVSKMSAIDFLRDVGKNFRVGTMLSKDIVARRLNSDEGISFAEFSYQVLQGNDFL 190

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L  NY+  LQ+GGSDQWGN+  G+DL  +++   +   TSP++T   G K GK+   A+
Sbjct: 191 YLFDNYNVTLQLGGSDQWGNLTSGMDLIRKVRGASVNVFTSPIITDNQGRKFGKSEGNAM 250

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIA 303
           WL+  M SPY F+Q+W N  D +VV   K  T LP  EI+R+A+    +    EA++++A
Sbjct: 251 WLDPSMLSPYRFYQFWFNQPDDEVVKLLKVFTFLPKDEIERLAQQIQDDPGSREAQRVLA 310

Query: 304 TEITTMVHGREEAEKAATAAMECFDMS--------IHSQHMPTISISKDEVSRGMG---- 351
            E+T+ VHG +   +A  A+   F                +  + +  ++ S        
Sbjct: 311 WEVTSFVHGEDLTSQAIEASSALFGRGNLCNIDEQTLEAALDGVKVKAEDGSLDFAKAKV 370

Query: 352 ---LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGK 408
              ++   V AG   + +EARR +++  + +NN  +S     +    F       L  GK
Sbjct: 371 ADRVVEAAVAAGLFRTVSEARRAIEAGGLYLNNERVSGVDDVLSEDSFLHGRFALLRRGK 430

Query: 409 K 409
           K
Sbjct: 431 K 431


>gi|225550104|ref|ZP_03771064.1| tyrosyl-tRNA synthetase [Borrelia burgdorferi 118a]
 gi|225369216|gb|EEG98669.1| tyrosyl-tRNA synthetase [Borrelia burgdorferi 118a]
          Length = 405

 Score =  450 bits (1159), Expect = e-124,   Method: Composition-based stats.
 Identities = 158/408 (38%), Positives = 239/408 (58%), Gaps = 7/408 (1%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           LS+L +RGF+ Q ++ + L  L  +  +  Y G D T+SSLH GHL   + +  L++ GH
Sbjct: 5   LSLLHKRGFLKQCTSLKVLSDLMDREKIVFYAGVDATSSSLHIGHLIPFLAMMHLRQHGH 64

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
            PI L+G  T+ IGDPS + E R+++ S+EI  N   IK       K+    T    ++N
Sbjct: 65  MPIVLIGDSTAKIGDPSGKSEMRKILSSEEIGNNALLIKNQLQRITKF----TSECFIHN 120

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL ++ YI+ LR++G  FSVNRMLSFE+ + RL  +  LSF+EFNY +LQ+YD+  L 
Sbjct: 121 SNWLDNLNYIEFLRDVGMHFSVNRMLSFETYKRRL--DFGLSFIEFNYQLLQSYDYYMLN 178

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
           K  +CRLQ+GG DQWGNII G+DL  +    + F LT PL+T + G KMGK+  GA++L+
Sbjct: 179 KIKNCRLQIGGDDQWGNIISGVDLIRKKNGSETFGLTFPLITRSDGKKMGKSEKGAVYLD 238

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITT 308
             + S Y+F+QY+RN  D+DV +F    T L   EI+ ++  +G  +N+AK+I+A EIT 
Sbjct: 239 SNLFSIYDFYQYFRNTSDSDVKTFLYLFTFLEEDEIELISNFKGNSLNKAKEILAFEITK 298

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
           +VHG  EA K   A+   F  S    ++P    S       + L+ L++ +    S +E 
Sbjct: 299 IVHGEAEALKVQEASFAAFRGSGDRSNIPFFKFSFSSPKEEILLVDLMLDSKIVPSKSEG 358

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           RR + S  + IN   + ++   +  +DF +   ++L  GKKN +   L
Sbjct: 359 RRLIDSGGVYINGKRVESQSHLLTKKDF-NNNEVELRVGKKNFLRIVL 405


>gi|312149218|gb|ADQ29289.1| tyrosyl-tRNA synthetase [Borrelia burgdorferi N40]
          Length = 405

 Score =  450 bits (1159), Expect = e-124,   Method: Composition-based stats.
 Identities = 157/408 (38%), Positives = 239/408 (58%), Gaps = 7/408 (1%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           LS+L +RGF+ Q ++ + L  L  +  +  Y G D T+SSLH GHL   + +  L++ GH
Sbjct: 5   LSLLHKRGFLKQCTSLKVLSDLMDREKIVFYAGVDATSSSLHIGHLIPFLAMMHLRQHGH 64

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
            PI L+G  T+ IGDPS + E R+++ S+EI  N   IK       K+    T    ++N
Sbjct: 65  MPIVLIGDSTAKIGDPSGKSEMRKILSSEEIGNNALLIKNQLQRITKF----TSECFIHN 120

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL ++ YI+ LR++G  FSVNRMLSFE+ + R+  +  LSF+EFNY +LQ+YD+  L 
Sbjct: 121 SNWLDNLNYIEFLRDVGMHFSVNRMLSFETYKRRM--DFGLSFIEFNYQLLQSYDYYMLN 178

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
           K  +CRLQ+GG DQWGNII G+DL  +    + F LT PL+T + G KMGK+  GA++L+
Sbjct: 179 KIKNCRLQIGGDDQWGNIISGVDLIRKKNGSETFGLTFPLITRSDGKKMGKSEKGAVYLD 238

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITT 308
             + S Y+F+QY+RN  D+DV +F    T L   EI+ ++  +G  +N+AK+I+A EIT 
Sbjct: 239 SNLFSIYDFYQYFRNTSDSDVKTFLYLFTFLEEDEIELISNFKGNSLNKAKEILAFEITK 298

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
           +VHG  EA K   A+   F  S    ++P    S       + L+ L++ +    S +E 
Sbjct: 299 IVHGEAEALKVQEASFAAFRGSGDRSNIPFFKFSFSSPKEEILLVDLMLDSKIVPSKSEG 358

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           RR + S  + IN   + ++   +  +DF +   ++L  GKKN +   L
Sbjct: 359 RRLIDSGGVYINGKRVESQSHLLTKKDF-NNNEVELRVGKKNFLRIVL 405


>gi|297205173|ref|ZP_06922569.1| tyrosine--tRNA ligase [Lactobacillus jensenii JV-V16]
 gi|297149751|gb|EFH30048.1| tyrosine--tRNA ligase [Lactobacillus jensenii JV-V16]
          Length = 424

 Score =  450 bits (1159), Expect = e-124,   Method: Composition-based stats.
 Identities = 142/423 (33%), Positives = 212/423 (50%), Gaps = 17/423 (4%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQ-GVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           K D L  L  RG I+Q ++   L    ++   +  Y G D T  SLH GHL   M+L   
Sbjct: 7   KFDILEDLKWRGAINQQTDEEGLKKYLAEHDDLALYCGTDPTGDSLHIGHLIPFMILKRF 66

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q  G+ P+ ++GGGT  IGDPS R   R +   +++  N   +            G  + 
Sbjct: 67  QLAGYHPVIIIGGGTGSIGDPSGRKTERVLQSDEQVHHNEVALTNQMKKLF----GTENF 122

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            ++NN  WL  +  ++ LR+ G  F +N ML+ + V SRL  E  +SF EF Y ILQ  D
Sbjct: 123 QIVNNRDWLGKMSLLEFLRDYGKLFQINNMLAKDVVASRL--ENGISFTEFTYQILQGID 180

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKLFALTSPLLTTASGTKMGKTL 241
           F  L ++Y  ++Q+GGSDQWGNI  GIDL  RL+      F LT PL+  A GTK GK+ 
Sbjct: 181 FYILNRDYGVQMQIGGSDQWGNITSGIDLIHRLEGNERPAFGLTIPLMLKADGTKFGKSA 240

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAK 299
            GA+WL+ E TSPY F+Q+W N DD DVV + K  T L   EID +A+    E    EA+
Sbjct: 241 GGAVWLDPEKTSPYEFYQFWINQDDRDVVKYLKYFTFLSHEEIDALAEKVKNEPWKREAQ 300

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRGMGLL 353
           K +A E+T  VHG    E+A       F  ++    +  I        S +  +    L+
Sbjct: 301 KTLAAEVTKFVHGEAGLEEAQMITDALFSGNVKELSVKQIEQALKNAPSAESSNEKKNLV 360

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
             +V     +S  +AR  +++ AI +N + +   + ++          + +  GK+ + +
Sbjct: 361 DFLVDTKIESSKRQAREDIQNGAIYVNGNKVQELEFEVDPSASFDGKYVIIRKGKRKYTL 420

Query: 414 CHL 416
             +
Sbjct: 421 VTI 423


>gi|311742398|ref|ZP_07716207.1| tyrosine--tRNA ligase [Aeromicrobium marinum DSM 15272]
 gi|311314026|gb|EFQ83934.1| tyrosine--tRNA ligase [Aeromicrobium marinum DSM 15272]
          Length = 418

 Score =  450 bits (1159), Expect = e-124,   Method: Composition-based stats.
 Identities = 142/419 (33%), Positives = 218/419 (52%), Gaps = 14/419 (3%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L  RG +   ++   L    S G VT Y+G+D TA SLH G+L Q++    LQ  G
Sbjct: 4   VLDDLVARGLVAHSTDIEALREALSAGPVTYYVGFDPTAPSLHVGNLLQILTARRLQLAG 63

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+P+ L+GG T +IGDP    E R M   + + + +++I+   + F+ +  G   A ++N
Sbjct: 64  HRPLILVGGSTGLIGDPKESGE-RSMNSRETVADWVDRIRAQVTRFVDF-DGDNAATVVN 121

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W   +  ID LR+IG  F VNRML+ + V SRL+    +S+ EF+Y++LQ+ D++EL
Sbjct: 122 NLDWTGQLNTIDFLRDIGKHFPVNRMLARDVVSSRLES--GISYTEFSYVLLQSLDYLEL 179

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            + + C LQ GGSDQWGN+  G++L  R    ++ A  +PL+T A GTK GKT SG IWL
Sbjct: 180 HRRHGCVLQTGGSDQWGNLTAGVELVRRADGDRVHAFATPLITKADGTKFGKTESGTIWL 239

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIATE 305
           + ++ SPY F Q W   +D+ V  +  + T L +SEID +     +       ++ +A E
Sbjct: 240 DPDLMSPYAFHQTWIQAEDSKVGEYLAQFTFLELSEIDALMAEHAEAPGRRVPQRRLARE 299

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGM-------GLLTLIVK 358
           +TT+VHG  EAE A  AA   F     S  +P  +++      G+        +   +V 
Sbjct: 300 LTTIVHGAAEAEAAEHAASALFGKGELS-DLPEATLAAALTEAGVATVPADASVTDALVA 358

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            G   S + ARR +      +NN  + +    +      + G   L  GK+      L 
Sbjct: 359 CGLVDSRSAARRTVLEGGAYMNNQRVDDPDAPVADAPRLAGGWTVLRRGKRAVAGVKLA 417


>gi|119953162|ref|YP_945371.1| tyrosyl-tRNA synthetase [Borrelia turicatae 91E135]
 gi|254783575|sp|A1QZF9|SYY_BORT9 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|119861933|gb|AAX17701.1| tyrosyl-tRNA synthetase [Borrelia turicatae 91E135]
          Length = 406

 Score =  450 bits (1159), Expect = e-124,   Method: Composition-based stats.
 Identities = 165/409 (40%), Positives = 254/409 (62%), Gaps = 8/409 (1%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L IL +RGF+ Q +N   L  L  +  V  Y+G D T++SLH GHL   M++  LQ+ GH
Sbjct: 5   LEILEKRGFLKQCTNLEALSTLMDKERVVFYVGVDATSTSLHIGHLIPFMVMAHLQRQGH 64

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
            PI+L+GGGT+ IGDPS +D  R+++  ++I++N++ I+      I +  G     +L+N
Sbjct: 65  IPIALVGGGTTKIGDPSGKDAMRKILSKEDIEKNVKAIRAQLLRIIDFSHG----YILDN 120

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL +I YI+ LR+IG  FSVNRML FE+ + R+K    LSF+EFNY +LQ+YDF  L 
Sbjct: 121 SAWLDNINYIEFLRDIGVCFSVNRMLGFETYKRRIK--DGLSFIEFNYQLLQSYDFYMLN 178

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
           K  +C+LQ+GG DQWGNI+ G+DL ++    ++F LT PL+T + G KMGK+  GA++L+
Sbjct: 179 KIKNCKLQIGGDDQWGNIVSGVDLIKKKLGTEVFGLTLPLITRSDGKKMGKSEKGAVYLD 238

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITT 308
            E+ S Y+F+QY+RN+ D DV +F    T L   EI+ M+ ++G  +N+AK+ +A EIT 
Sbjct: 239 AELYSVYDFYQYFRNVPDLDVKNFLYLFTFLGDDEIEHMSSVKGYLLNKAKETLAFEITK 298

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQ-HMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
           +VHG + A KA++AA   F  S   +  +P   ++ D +   + L+ L+V +   +S +E
Sbjct: 299 IVHGEDAALKASSAARAAFKGSEGDRADIPFFKLALDSLEGSILLIDLMVLSKVVSSKSE 358

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           ARR + S  + I+   I ++   +   +F   G I+L  GKK  +   L
Sbjct: 359 ARRLINSGGVYIDKVRIGDQDYCLNKDNFI-NGEIELKIGKKRILRVIL 406


>gi|295395455|ref|ZP_06805654.1| tyrosine--tRNA ligase [Brevibacterium mcbrellneri ATCC 49030]
 gi|294971777|gb|EFG47653.1| tyrosine--tRNA ligase [Brevibacterium mcbrellneri ATCC 49030]
          Length = 430

 Score =  450 bits (1158), Expect = e-124,   Method: Composition-based stats.
 Identities = 143/430 (33%), Positives = 219/430 (50%), Gaps = 22/430 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D  S L +R  + Q ++   L    S+  +  Y+G+D TA SLH G+L Q+++   LQ  
Sbjct: 2   DIFSDLVKRELVAQTTDEDALHKALSEESLKFYVGFDPTAPSLHMGNLVQILVARRLQAA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P  L+GG T +IGDP    E R +     ++  +EKI+     F+ +  G   A M+
Sbjct: 62  GHTPYMLVGGATGLIGDPRMTSE-RSLNPRDVVEGWVEKIRAQIQPFLDF-EGPNAATMV 119

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I  +D LR++G  FSVNRML+ E+V +RL  +  +SF EF Y +LQ  D++E
Sbjct: 120 NNYDWTGDISVLDFLRDVGKHFSVNRMLAKEAVSARLNSDAGISFTEFAYQLLQGNDYLE 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + Y   LQ GGSDQWGN+  G DL  R++   + A++  L+T A GTK GKT +G +W
Sbjct: 180 LYRRYGITLQTGGSDQWGNLTSGADLIRRVERTSVHAMSIKLITKADGTKFGKTETGTVW 239

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIAT 304
           L+  +TSPY F Q+W N  DAD   + K  +   + EI+ + +   +       +K +A 
Sbjct: 240 LDPTLTSPYAFSQFWLNTADADAPGYLKVFSLRELDEINDIIEQFKEAPHTRLVQKTLAR 299

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQ-----------HMPTISISKDEVSRGMGLL 353
           ++T +VHG+E  ++A  AA   F     ++            +P   I    ++ G+ ++
Sbjct: 300 DVTELVHGKEATDQAFAAADALFGRGELTELDEPTIAGATSALPGTDIDSAALAAGVNVV 359

Query: 354 TLIVKA----GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG---NIKLSF 406
            L V A    G   S  E R+ ++     INN  + +E   +    F   G      L  
Sbjct: 360 DLFVDAFAQTGQLKSKGEVRKAIQQGGAYINNVKVESEDHVMTADQFLPAGDHAVALLRR 419

Query: 407 GKKNHIICHL 416
           GKK   +  L
Sbjct: 420 GKKTLAVACL 429


>gi|309803428|ref|ZP_07697523.1| tyrosine--tRNA ligase [Lactobacillus iners LactinV 11V1-d]
 gi|312871028|ref|ZP_07731130.1| tyrosine--tRNA ligase [Lactobacillus iners LEAF 3008A-a]
 gi|312872057|ref|ZP_07732132.1| tyrosine--tRNA ligase [Lactobacillus iners LEAF 2062A-h1]
 gi|312873438|ref|ZP_07733488.1| tyrosine--tRNA ligase [Lactobacillus iners LEAF 2052A-d]
 gi|325911290|ref|ZP_08173703.1| tyrosine--tRNA ligase [Lactobacillus iners UPII 143-D]
 gi|325913559|ref|ZP_08175924.1| tyrosine--tRNA ligase [Lactobacillus iners UPII 60-B]
 gi|329920834|ref|ZP_08277421.1| tyrosine--tRNA ligase [Lactobacillus iners SPIN 1401G]
 gi|308164592|gb|EFO66844.1| tyrosine--tRNA ligase [Lactobacillus iners LactinV 11V1-d]
 gi|311090947|gb|EFQ49341.1| tyrosine--tRNA ligase [Lactobacillus iners LEAF 2052A-d]
 gi|311092350|gb|EFQ50719.1| tyrosine--tRNA ligase [Lactobacillus iners LEAF 2062A-h1]
 gi|311093356|gb|EFQ51698.1| tyrosine--tRNA ligase [Lactobacillus iners LEAF 3008A-a]
 gi|325476850|gb|EGC80003.1| tyrosine--tRNA ligase [Lactobacillus iners UPII 143-D]
 gi|325477138|gb|EGC80285.1| tyrosine--tRNA ligase [Lactobacillus iners UPII 60-B]
 gi|328935614|gb|EGG32081.1| tyrosine--tRNA ligase [Lactobacillus iners SPIN 1401G]
          Length = 417

 Score =  450 bits (1158), Expect = e-124,   Method: Composition-based stats.
 Identities = 144/416 (34%), Positives = 208/416 (50%), Gaps = 25/416 (6%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGV-VTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           D L  L  RG I+Q ++ + L     Q   +T Y G D T  SLH GHL   M+L   Q 
Sbjct: 2   DILEDLKWRGAINQQTDEQGLREYLQQHKDLTLYCGTDPTGDSLHIGHLIPFMILKRFQM 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            G+ PI L+GG T  IGDPS R   R +   ++++ N + +            G  +  +
Sbjct: 62  AGYHPIILIGGATGAIGDPSGRKTERVLQSEEQVRRNEKSLTAQMEKLF----GTENFEI 117

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN +WL  +  +D LR+ G  F VN ML+ + V SRL     +S+ EF Y I+QA DF 
Sbjct: 118 VNNASWLSKLTLLDFLRDYGKLFQVNTMLNKDIVASRLA--TGISYTEFTYQIMQAIDFY 175

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSG 243
            L KN +  LQ+GG DQWGNI  GIDL  R++      F LT PL+  + GTK GK+  G
Sbjct: 176 YLNKNKNVTLQIGGGDQWGNITGGIDLIHRIEGADHPAFGLTIPLMLKSDGTKFGKSAGG 235

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKI 301
           AIWL+ E TSPY F+Q+W N DD DV+ + K  T L   EI+ +A    KE     A++ 
Sbjct: 236 AIWLDPEKTSPYEFYQFWINQDDRDVIKYLKYFTFLSHQEIEDLAISVEKEPWKRLAQRK 295

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMG 351
           +A E+T  VHG      A       F+ +I            ++ P + ISK        
Sbjct: 296 LAEEVTKFVHGEAGLRDAQFITNALFEGNIKDLSVKQIEQGFKNAPYVEISK----ESKN 351

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFG 407
           L+ L+V+ G   S  +AR  + + AI +N +   +    + + +      + +  G
Sbjct: 352 LVDLLVETGIEKSKRQAREDINNGAIYVNGTRQDDCDFLVDVPNSFEGKFVIIRRG 407


>gi|88704554|ref|ZP_01102267.1| tyrosyl-tRNA synthetase [Congregibacter litoralis KT71]
 gi|88700875|gb|EAQ97981.1| tyrosyl-tRNA synthetase [Congregibacter litoralis KT71]
          Length = 448

 Score =  450 bits (1158), Expect = e-124,   Method: Composition-based stats.
 Identities = 152/433 (35%), Positives = 231/433 (53%), Gaps = 23/433 (5%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           +    S  L  L +R  I QI+    L      G  + Y G+D TA SLH G L  L++L
Sbjct: 15  VTTMTSALLRELQQRELIFQIAGEDNLPGWLDGGTRSLYCGFDPTADSLHIGSLVPLLML 74

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GH+PI+L+GG T +IGDPSF+ + R++     ++  +EK+    S F+ +  G 
Sbjct: 75  RRFQLAGHRPIALVGGATGLIGDPSFKAQERQLNTPDIVEAWVEKLSQQVSRFVDFDAGP 134

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMIL 179
             A+++NN  W  ++  +  LR++G  FS+N M+  ESV+ R++RE   +SF EF YMIL
Sbjct: 135 QSAVVVNNLQWTRNLDVLTFLRDVGKHFSINAMIQKESVKQRIEREGSGISFTEFAYMIL 194

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK 239
           Q+YDF EL + YDC LQ+GGSDQWGNI  GIDL  RL   +++ LT PL+T + G+K GK
Sbjct: 195 QSYDFAELYQRYDCGLQLGGSDQWGNITGGIDLTRRLHGGQVYGLTMPLITKSDGSKFGK 254

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLP---MSEIDRMAKLQGKEIN 296
           T SG IWL+   TSPY+F+Q+W ++ D DV  F +  T LP   ++EI+R    +     
Sbjct: 255 TESGTIWLDAARTSPYSFYQFWLSVADDDVYRFLRYFTFLPVIDIAEIERSDAQRSGRP- 313

Query: 297 EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS-----------QHMPTISISKDE 345
           EA++I+A E+T +VHG E    A       F   +               +P+  I + E
Sbjct: 314 EAQRILAEEVTRLVHGEEGVAAAKRITESLFSGELGGLSEQDLEQLMLDGLPSSVIKEGE 373

Query: 346 VSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEK-----LQIKLQDFDSTG 400
           +     L  L+ +AG A S  + +  L+ +A+ +N   ++             +      
Sbjct: 374 LPE--TLTQLLTEAGLAASGKQIKDALQRSAVIVNGQSLAMADNAAVGEVFGREQALFGR 431

Query: 401 NIKLSFGKKNHII 413
              +  GKK + +
Sbjct: 432 FHLVRVGKKKYHL 444


>gi|51598626|ref|YP_072814.1| tyrosyl-tRNA synthetase [Borrelia garinii PBi]
 gi|81610041|sp|Q661P9|SYY_BORGA RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|51573197|gb|AAU07222.1| tyrosyl-tRNA synthetase [Borrelia garinii PBi]
          Length = 405

 Score =  450 bits (1158), Expect = e-124,   Method: Composition-based stats.
 Identities = 156/408 (38%), Positives = 238/408 (58%), Gaps = 7/408 (1%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L++L +RGF+ Q ++ + L  L  +  +  Y G D T+SSLH GHL   + +  L++ GH
Sbjct: 5   LNLLYKRGFLKQCTSLKVLSDLMDREKIVFYAGVDTTSSSLHIGHLIPFLAMMHLRQHGH 64

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
            PI L+G  T+ IGDPS + E R+++ S+ I  N   IK       ++ +       ++N
Sbjct: 65  MPIVLIGDSTTKIGDPSGKSEMRKILSSEVINNNALSIKNQLQKITRFSSS----CFIHN 120

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL ++ YI+ LR+IG  FSVNRMLSFE+ + RL  +  LSF+EFNY +LQ+YD+  L 
Sbjct: 121 SNWLDNLNYIEFLRDIGIHFSVNRMLSFETYKRRL--DFGLSFIEFNYQLLQSYDYYMLN 178

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
           K  +C+LQ+GG DQWGNI+ G+DL  R    + F LT PL+T + G KMGK+  GA++L+
Sbjct: 179 KIKNCKLQIGGDDQWGNIVSGVDLIRRKMGVEAFGLTFPLITRSDGKKMGKSEKGAVYLD 238

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITT 308
             + S Y+F+QY+RN  D+DV +F    T L   EI+ ++  +G  +N+AK+I+A EIT 
Sbjct: 239 SSLYSIYDFYQYFRNTSDSDVKTFLYLFTFLEEDEIESISNFKGNSLNKAKEILAFEITK 298

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
           +VHG  EA K   A+   F  S    ++P    S   +   + L+ L++ +    S +E 
Sbjct: 299 IVHGEVEALKVQEASFAAFRGSGDRSNIPFFKFSFSGLEEEILLIDLMLDSKIVPSKSEG 358

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           RR + S  + IN   + N+   I  +DF +   I+L  GKK  +   L
Sbjct: 359 RRLINSGGVYINGKRVENQNHCITREDF-NNNEIELRVGKKKFLRIVL 405


>gi|298253918|ref|ZP_06977505.1| tyrosyl-tRNA synthetase [Gardnerella vaginalis 5-1]
 gi|297532061|gb|EFH71036.1| tyrosyl-tRNA synthetase [Gardnerella vaginalis 5-1]
          Length = 439

 Score =  450 bits (1158), Expect = e-124,   Method: Composition-based stats.
 Identities = 135/421 (32%), Positives = 213/421 (50%), Gaps = 19/421 (4%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +     L  RG I Q ++ ++L        +T Y GYD TA+SLH G+L QL+ +  LQ 
Sbjct: 13  ASLFEELKWRGLISQSTDEQQLAQALDGEPLTYYCGYDPTAASLHIGNLVQLINMRHLQA 72

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH PI+L+GG T +IGDP    E R +     +    E+++      +    G+     
Sbjct: 73  AGHHPIALVGGATGLIGDPRQSGE-RTLNSKDIVAGWAERLRKQIGQIL-PLDGENPVRF 130

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           ++N  W+  +  ID LR++G  F V  MLS + V  RL  ++ +SF EF+Y +LQ  DF+
Sbjct: 131 VSNYDWVSKMSAIDFLRDVGKNFRVGTMLSKDIVARRLNSDEGISFAEFSYQVLQGNDFL 190

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L  NY+  LQ+GGSDQWGN+  G+DL  +++   +   TSP++T   G K GK+   A+
Sbjct: 191 YLFDNYNVTLQLGGSDQWGNLTSGMDLIRKVRGTSVNVFTSPIITDNQGRKFGKSEGNAM 250

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIA 303
           WL+  M SPY F+Q+W N  D +VV   K  T LP  EI+R+A+    +    EA++++A
Sbjct: 251 WLDPSMLSPYRFYQFWFNQPDDEVVKLLKVFTFLPKDEIERLAQQIQDDPGSREAQRVLA 310

Query: 304 TEITTMVHGREEAEKAATAAMECFDMS--------IHSQHMPTISISKDEVSRGMG---- 351
            E+T+ VHG +   +A  A+   F                +  + +  ++ S        
Sbjct: 311 WEVTSFVHGEDLTNQAIEASSALFGRGDLCNIDEQTLEAALDGVKVKAEDGSLDFAKAKV 370

Query: 352 ---LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGK 408
              ++   V AG   + +EARR +++  + +NN  +S     +    F       L  GK
Sbjct: 371 ADRVVEAAVAAGLFRTVSEARRAIEAGGLYLNNERVSGVDDVLSEGSFLHGRFALLRRGK 430

Query: 409 K 409
           K
Sbjct: 431 K 431


>gi|258625613|ref|ZP_05720495.1| tyrosyl-tRNA synthetase [Vibrio mimicus VM603]
 gi|258582115|gb|EEW06982.1| tyrosyl-tRNA synthetase [Vibrio mimicus VM603]
          Length = 426

 Score =  450 bits (1157), Expect = e-124,   Method: Composition-based stats.
 Identities = 152/421 (36%), Positives = 223/421 (52%), Gaps = 13/421 (3%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           F   L +RG I Q +    L    +      Y G+D TA SLH GHL  L++L   Q  G
Sbjct: 6   FFDDLQQRGLIAQSTPLEALVERFAT-PQVLYCGFDPTAGSLHIGHLVPLLMLKRFQNAG 64

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM-L 126
           H+ I+L+GG T +IGDPSF+   R +  +Q +Q+ +  +    +  +   +    +L+ +
Sbjct: 65  HQAIALIGGATGMIGDPSFKANERALNSAQTVQQWVNDLSQQITHLMASQSENPTSLITV 124

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDFV 185
           NN  W+  I  ID  R++G  FSVN M++ ESV+ RL R +Q +SF EF+Y +LQ+YDF 
Sbjct: 125 NNADWIGKINLIDFFRDVGKHFSVNTMINRESVKQRLARPDQGISFTEFSYSLLQSYDFA 184

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L + + C LQ+GG+DQWGNI+ GIDL  RL   ++  LT PL+T + GTK GKT SGA+
Sbjct: 185 HLNREFGCALQIGGNDQWGNIVSGIDLTRRLNGAEVCGLTLPLITKSDGTKFGKTESGAV 244

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKKIIA 303
           WL    TSPY F+Q+W N DDADV  F    T L  +EI+ + +         +A++I+A
Sbjct: 245 WLESSKTSPYRFYQFWLNSDDADVYRFLAYYTFLSTAEIEEIRQADTLRSGKPQAQQILA 304

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRGMGLLTLIV 357
             +T  VHG E    A       F   +    +  +S      +     SR   LL L++
Sbjct: 305 EHVTRFVHGEEGLAAAQRITQALFSGDVSYLSLSELSQLELDGLPCVAASRTDTLLDLLL 364

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            +G A+S  +AR  L++ AI++N   +  E   +            L  GKK   +  L 
Sbjct: 365 TSGLASSKRQAREWLENGAIRVNGERVLQEG--VLSGFALFDRYYVLQRGKKQFALIKLD 422

Query: 418 G 418
           G
Sbjct: 423 G 423


>gi|283769555|ref|ZP_06342451.1| tyrosine--tRNA ligase [Bulleidia extructa W1219]
 gi|283103823|gb|EFC05209.1| tyrosine--tRNA ligase [Bulleidia extructa W1219]
          Length = 437

 Score =  450 bits (1157), Expect = e-124,   Method: Composition-based stats.
 Identities = 152/412 (36%), Positives = 231/412 (56%), Gaps = 14/412 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +FL  L  RG +   ++   L     +   T Y G+D TA SLH GHL Q+MLL   QK 
Sbjct: 2   NFLEELQWRGLVKDYTDLEALQKRL-EKPTTVYCGFDPTADSLHVGHLQQIMLLRRYQKV 60

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+ ++L GG T +IGDP      R++++ +E+  N+E IK   + FI++ +G   A+M+
Sbjct: 61  GHRVLALAGGFTGMIGDPRP-TTERKLLQHEEVLHNVECIKHQLAMFIEF-SGDNAAVMV 118

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  +  +D LR+ G  F++  ML  ++++ R+  +  LS+LEF+Y ILQA DF  
Sbjct: 119 NNNDWLEKMTTLDFLRDFGKQFNIAYMLQKDTIKRRV--DTGLSYLEFSYTILQAIDFYH 176

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSGA 244
           L K YDCR+Q+GGSDQWGN+  G+DL ++L+    ++F +TSPL+T + G+K GK+    
Sbjct: 177 LFKEYDCRVQIGGSDQWGNLTSGMDLIKKLEGNHTEVFGITSPLITKSDGSKFGKSEGRN 236

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKII 302
           IWL+   TS Y F+Q+W N  D  +V + KRL+     EI+R+A L   E    EA+K +
Sbjct: 237 IWLDPNRTSAYEFYQFWLNTPDDSIVDYLKRLSLKTPEEIERLAHLVETEPERREAQKAL 296

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI-----SISKDEVSRGMGLLTLIV 357
           A E+TT VHG++  EKA   +   F     S     +        K  V  G+G+L  +V
Sbjct: 297 ACELTTYVHGQKGLEKALRISETLFSGDFMSLSPAELKEGLSDAKKVLVDSGIGILDALV 356

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
            AG   S + AR+ ++  +I IN   I      +  ++      + L  GK+
Sbjct: 357 LAGVCQSKSNARQLIQQGSISINGIKIQAIDGVLVKEEAIDQEFMILKKGKR 408


>gi|241888646|ref|ZP_04775953.1| tyrosyl-tRNA synthetase [Gemella haemolysans ATCC 10379]
 gi|241864669|gb|EER69044.1| tyrosyl-tRNA synthetase [Gemella haemolysans ATCC 10379]
          Length = 417

 Score =  450 bits (1157), Expect = e-124,   Method: Composition-based stats.
 Identities = 135/423 (31%), Positives = 223/423 (52%), Gaps = 22/423 (5%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S  L  L  R  ++Q ++   +  L  +  V+ Y G D T +SLH GHL   + L   Q+
Sbjct: 2   SKLLEDLKYRDLVYQQTDEEGIKELLEKESVSIYCGTDPTGNSLHIGHLLPFLTLKRFQQ 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP+ L+GGGT IIGDPS R E R++   + I++N  +++    +  +   G  +   
Sbjct: 62  HGHKPVILVGGGTGIIGDPSGRSEERQLQSLEVIEDNARRLEAQLRNIFR---GDDNIEF 118

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  WL  +  I+ LR+ G   ++N +L+ +SV SRL     LSF EF+Y ILQ  D+ 
Sbjct: 119 VNNIDWLGKLSMIEFLRDYGKLVNINYLLAKDSVASRLDN--GLSFTEFSYTILQGIDYA 176

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERL-KTPKLFALTSPLLTTASGTKMGKTLSGA 244
            L ++++ +LQ+GGSDQWGNI  G+++  +L    + +  T PL+  + GTK GK+  GA
Sbjct: 177 YLNEHHNVKLQIGGSDQWGNITTGLEIMRKLRGDVEAYGFTIPLMLKSDGTKFGKSTGGA 236

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKII 302
           +WL+ E T+PY F+Q+W N  D +VV   K+ T L   +I+ + +   KE     A+K +
Sbjct: 237 VWLDPEQTTPYEFYQFWFNTADTEVVPALKKFTFLEKEQIEALRESSEKEPHLRLAQKAL 296

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGL 352
           A E+  +VHG +  E A       F  +I            + MP   + K E      +
Sbjct: 297 AEEMVKIVHGEKALESALNITKALFSGNIKELTHDELKAAVKGMPKSELEKKEY----NI 352

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           +  +V++    S  +AR  + + A+ +N   +++ +  ++ +D    G   L  GKK ++
Sbjct: 353 VDFLVESNLVQSKRQAREDVNNGAVYVNGDKVTDLEYVVEGKDRLEDGFTVLRRGKKKYL 412

Query: 413 ICH 415
           +  
Sbjct: 413 LVE 415


>gi|15594715|ref|NP_212504.1| tyrosyl-tRNA synthetase (tyrS) [Borrelia burgdorferi B31]
 gi|216264532|ref|ZP_03436524.1| tyrosyl-tRNA synthetase [Borrelia burgdorferi 156a]
 gi|218249813|ref|YP_002374887.1| tyrosyl-tRNA synthetase [Borrelia burgdorferi ZS7]
 gi|226321685|ref|ZP_03797211.1| tyrosyl-tRNA synthetase [Borrelia burgdorferi Bol26]
 gi|6226205|sp|O51343|SYY_BORBU RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|254783571|sp|B7J1U2|SYY_BORBZ RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|2688267|gb|AAC66744.1| tyrosyl-tRNA synthetase (tyrS) [Borrelia burgdorferi B31]
 gi|215981005|gb|EEC21812.1| tyrosyl-tRNA synthetase [Borrelia burgdorferi 156a]
 gi|218165001|gb|ACK75062.1| tyrosyl-tRNA synthetase [Borrelia burgdorferi ZS7]
 gi|226232874|gb|EEH31627.1| tyrosyl-tRNA synthetase [Borrelia burgdorferi Bol26]
          Length = 405

 Score =  450 bits (1157), Expect = e-124,   Method: Composition-based stats.
 Identities = 155/406 (38%), Positives = 238/406 (58%), Gaps = 7/406 (1%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           LS+L +RGF+ Q ++ + L  L  +  +  Y G D T+SSLH GHL   + +  L++ GH
Sbjct: 5   LSLLHKRGFLKQCTSLKVLSDLMDREKIVFYAGVDATSSSLHIGHLIPFLAMMHLRQHGH 64

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
            PI L+G  T+ IGDPS + E R+++ S+EI  N   IK       K+    T    ++N
Sbjct: 65  MPIVLIGDSTAKIGDPSGKSEMRKILSSEEIGNNALLIKNQLQRITKF----TSECFIHN 120

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL ++ YI+ LR++G  FSVNRMLSFE+ + R+  +  LSF+EFNY +LQ+YD+  L 
Sbjct: 121 SNWLDNLNYIEFLRDVGMHFSVNRMLSFETYKRRM--DFGLSFIEFNYQLLQSYDYYMLN 178

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
           K  +CRLQ+GG DQWGNII G+DL  +    + F LT PL+T + G KMGK+  GA++L+
Sbjct: 179 KIKNCRLQIGGDDQWGNIISGVDLIRKKNGSETFGLTFPLITRSDGKKMGKSEKGAVYLD 238

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITT 308
             + S Y+F+QY+RN  D+DV +F    T L   EI+ ++  +G  +N+AK+I+A EIT 
Sbjct: 239 SNLFSIYDFYQYFRNTSDSDVKTFLYLFTFLEEDEIELISNFKGNSLNKAKEILAFEITK 298

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
           +VHG  EA K   A+   F  S    ++P    S   +   + L+ L++ +    S +E 
Sbjct: 299 IVHGEAEALKVQEASFAAFRGSGDRSNIPFFKFSFSSLKEEILLVDLMLDSKIVPSKSEG 358

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           RR + S  + IN   + ++   +  +DF +   ++L  GKK  +  
Sbjct: 359 RRLIDSGGVYINGKRVESQSHLLTKKDF-NNNEVELRVGKKKFLRI 403


>gi|111115193|ref|YP_709811.1| tyrosyl-tRNA synthetase [Borrelia afzelii PKo]
 gi|123145731|sp|Q0SNE3|SYY_BORAP RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|110890467|gb|ABH01635.1| tyrosyl-tRNA synthetase [Borrelia afzelii PKo]
          Length = 405

 Score =  450 bits (1157), Expect = e-124,   Method: Composition-based stats.
 Identities = 158/408 (38%), Positives = 238/408 (58%), Gaps = 7/408 (1%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L++L +RGF+ Q ++ + L  L  +  +  Y G D T+SSLH GHL   + +  L++ GH
Sbjct: 5   LNLLHKRGFLKQCTSLKVLSDLMDREKIVFYAGVDATSSSLHIGHLIPFLAMMHLRQHGH 64

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
            PI L+G  T+ IGDPS + E R+++  +EI  N   IK       K+ +       ++N
Sbjct: 65  IPIVLIGDSTTKIGDPSGKSEMRKILSLEEISNNAFSIKNQLQRITKFSSK----CFIHN 120

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL ++ YI+ LR+IG  FSVNRMLSFE+ + RL  +  LSF+EFNY +LQ+YD+  L 
Sbjct: 121 SNWLDNLNYIEFLRDIGIHFSVNRMLSFETYKKRL--DFGLSFIEFNYQLLQSYDYYMLN 178

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
           K  +CRLQ+GG DQWGNII GIDL  +    + F LT PL+T + G KMGK+  GA++L+
Sbjct: 179 KIRNCRLQIGGDDQWGNIISGIDLIRKKAGVETFGLTFPLITRSDGKKMGKSEKGAVYLD 238

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITT 308
             + S Y+F+QY+RN  D+DV +F    T L   EI+ ++  +G  +N+AK+I+A EIT 
Sbjct: 239 SSLYSIYDFYQYFRNTSDSDVKTFLYLFTFLEEDEIELISNFKGNSLNKAKEILAFEITK 298

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
           +VHG  EA K   A+   F  S    ++P    S   +   + L+ L++ +    S +E 
Sbjct: 299 IVHGEAEALKVQEASFAAFRGSGDRSNIPFFKFSFSNLEEEVLLINLMLDSKIVPSKSEG 358

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           RR + S  + IN   + N+   +  +DF +   I+L  GKK  +   L
Sbjct: 359 RRLIDSGGVYINGKRVENQNHCLTRKDF-NNNEIELRVGKKKFLRIVL 405


>gi|224540975|ref|ZP_03681514.1| hypothetical protein CATMIT_00126 [Catenibacterium mitsuokai DSM
           15897]
 gi|224526126|gb|EEF95231.1| hypothetical protein CATMIT_00126 [Catenibacterium mitsuokai DSM
           15897]
          Length = 408

 Score =  450 bits (1157), Expect = e-124,   Method: Composition-based stats.
 Identities = 140/420 (33%), Positives = 224/420 (53%), Gaps = 28/420 (6%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           F   L  RG I  +S+   L    + G +T YIG D T  SLH GH +  ++   L+  G
Sbjct: 3   FYDELVWRGLIKDVSSED-LKDKLNAGGMTFYIGTDPTGDSLHIGHFSSFLMSKRLKDAG 61

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H PI L+GG T  IGDP      R M+  +++Q N + +K        +        ++N
Sbjct: 62  HHPILLVGGATGQIGDPKP-TTERPMITKEQVQHNFDCLKKQAEDLFGFE-------VVN 113

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W   I +ID LR+ G +F++N MLS + ++ RL  ++ ++F EF+YMI+QA DF  L
Sbjct: 114 NLDWSKDINFIDWLRDYGKYFNINYMLSKDIIKRRL--DEGITFTEFSYMIMQAMDFYYL 171

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            +N  C LQ+ G DQWGNI  GI+L  +    + +  T PLLT + GTK GK+   AIWL
Sbjct: 172 HENKGCDLQVAGQDQWGNITAGIELIRKKTGDEAYGFTMPLLTKSDGTKFGKSEGNAIWL 231

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATE 305
           ++E TSPY  +Q++ N +D+ V+ + K LT L   EI+ + +       + +A K +A E
Sbjct: 232 DREKTSPYEMYQFFINSEDSKVIDYLKYLTFLSKEEIEALEESNKNEPHLRKAHKALAKE 291

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTL 355
           + T +HG +  E+A   + + F   I S            +P+I +++DE      +L +
Sbjct: 292 VITFIHGADAYEEAVNISEKLFSGDIKSMTYEQVKQCFNGVPSIDVTEDE-----QILNV 346

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +VKAG A+S  EAR+ +K  ++ +N   +++EK  +   +        +  GKK + + +
Sbjct: 347 LVKAGAASSNREARQFVKGGSVLVNGEKVTDEKFVVSKDNAFGGKVTVIRRGKKKYFVIN 406


>gi|184201190|ref|YP_001855397.1| tyrosyl-tRNA synthetase [Kocuria rhizophila DC2201]
 gi|183581420|dbj|BAG29891.1| tyrosyl-tRNA synthetase [Kocuria rhizophila DC2201]
          Length = 436

 Score =  449 bits (1156), Expect = e-124,   Method: Composition-based stats.
 Identities = 148/429 (34%), Positives = 221/429 (51%), Gaps = 19/429 (4%)

Query: 2   PAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
           P+F S     L+ RG I   ++P+ L        +T Y G+D TASSLH GHL QL+LL 
Sbjct: 13  PSF-SSLWEELNWRGLIQISTDPQALQEALDGEPITYYCGFDPTASSLHLGHLVQLLLLR 71

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKT 121
            LQ  GH PI L+GG T +IGDP  +   R +   + + + ++ ++     F+ +  G  
Sbjct: 72  RLQLAGHHPIGLVGGSTGLIGDPR-QTSERILNSRETVAQWVDMLREQVQRFLSF-EGAN 129

Query: 122 DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA 181
            A M+NN  W   +  ID LR+IG  F V  M+  + V  RL  E+ +S+ EF+Y ILQ 
Sbjct: 130 PARMVNNLDWTSQLSAIDFLRDIGKNFRVGTMIKKDIVAKRLNSEEGISYTEFSYQILQG 189

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            DF+ L + YDC LQ GGSDQWGN+  G DL  + +   + A+ +PL+T + GTK GK+ 
Sbjct: 190 LDFLNLYRQYDCVLQTGGSDQWGNLTSGTDLVRKTEGAAVHAIGTPLITNSDGTKFGKSE 249

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAK 299
             AIWL+ E+TSPY F+Q+W N  DADV    K  T     EI  + +L  +E    EA+
Sbjct: 250 GNAIWLDPELTSPYAFYQFWLNTADADVADRLKVFTFRTREEIAELERLTREEPHRREAQ 309

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMS-----------IHSQHMPTISISKDEVSR 348
           +++A ++ T+VHG +  ++A  A+   F                ++ +P  ++       
Sbjct: 310 RVLAADVNTLVHGEQATQQAVEASAAVFGRGSFEDLDASTLAAVAEALPGATVPGGTQHA 369

Query: 349 GMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGK 408
              ++ L+V  G + S + ARR LK   + +NN  +  E   +   D        L  GK
Sbjct: 370 ---VVDLLVATGLSDSKSAARRTLKEGGVSLNNRKVQGEDAVVSPGDLLHGRFALLRRGK 426

Query: 409 KNHIICHLC 417
           KN       
Sbjct: 427 KNLAAVTFT 435


>gi|224533242|ref|ZP_03673842.1| tyrosine--tRNA ligase [Borrelia burgdorferi WI91-23]
 gi|225549129|ref|ZP_03770104.1| tyrosyl-tRNA synthetase [Borrelia burgdorferi 94a]
 gi|224511969|gb|EEF82370.1| tyrosine--tRNA ligase [Borrelia burgdorferi WI91-23]
 gi|225370355|gb|EEG99793.1| tyrosyl-tRNA synthetase [Borrelia burgdorferi 94a]
          Length = 405

 Score =  449 bits (1156), Expect = e-124,   Method: Composition-based stats.
 Identities = 157/408 (38%), Positives = 241/408 (59%), Gaps = 7/408 (1%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           LS+L +RGF+ Q ++ + L  L  +  +  Y G D T+SSLH GHL   + +  L++ GH
Sbjct: 5   LSLLHKRGFLKQCTSLKVLSDLMDREKIVFYAGVDATSSSLHIGHLIPFLAMMHLRQHGH 64

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
            PI L+G  T+ IGDPS + E R+++ S+EI  N   IK       K+    T    ++N
Sbjct: 65  MPIVLIGDSTAKIGDPSGKSEMRKILSSEEIGNNALLIKNQLQRITKF----TSECFIHN 120

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL ++ YI+ LR++G  FSVNRMLSFE+ + R+  +  LSF+EFNY +LQ+YD+  L 
Sbjct: 121 SNWLDNLNYIEFLRDVGIHFSVNRMLSFETYKRRM--DFGLSFIEFNYQLLQSYDYYMLN 178

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
           K  +CRLQ+GG DQWGNII G+DL  +    + F LT PL+T + G KMGK+  GA++L+
Sbjct: 179 KIKNCRLQIGGDDQWGNIISGVDLIRKKNGSETFGLTFPLITRSDGKKMGKSEKGAVYLD 238

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITT 308
             + S Y+F+QY+RN  D+DV +F    T L   EI+ ++  +G  +N+AK+I+A EIT 
Sbjct: 239 SNLFSVYDFYQYFRNTSDSDVKTFLYLFTFLKEDEIELISNFKGNSLNKAKEILAFEITK 298

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
           +VHG  EA K   A+   F  S    ++P    S   +   + L+ L++ +   +S +E 
Sbjct: 299 IVHGEAEALKVQEASFAAFRGSGDRSNIPFFKFSFSSLKEEILLVDLMLDSKIVSSKSEG 358

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           RR + S  + IN   + ++   +  +DF +   ++L  GKKN +   L
Sbjct: 359 RRLIDSGGVYINGKRVESQSHLLTKKDF-NNNEVELRVGKKNFLRIVL 405


>gi|221217684|ref|ZP_03589152.1| tyrosyl-tRNA synthetase [Borrelia burgdorferi 72a]
 gi|221192361|gb|EEE18580.1| tyrosyl-tRNA synthetase [Borrelia burgdorferi 72a]
          Length = 405

 Score =  449 bits (1156), Expect = e-124,   Method: Composition-based stats.
 Identities = 158/408 (38%), Positives = 240/408 (58%), Gaps = 7/408 (1%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           LS+L +RGF+ Q ++ + L  L  +  +  Y G D T+SSLH GHL   + +  L++ GH
Sbjct: 5   LSLLHKRGFLKQCTSLKVLSDLMDREKIVFYAGVDATSSSLHIGHLIPFLAMMHLRQHGH 64

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
            PI L+G  T+ IGDPS + E R+++ S+EI  N   IK       K+    T    ++N
Sbjct: 65  MPIVLIGDSTAKIGDPSGKSEMRKILSSEEIGNNALLIKNQLQRITKF----TSECFIHN 120

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL ++ YI+ LR++G  FSVNRMLSFE+ + RL  +  LSF+EFNY +LQ+YD+  L+
Sbjct: 121 SNWLDNLNYIEFLRDVGMHFSVNRMLSFETYKRRL--DFGLSFIEFNYQLLQSYDYYMLS 178

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
           K  +CRLQ+GG DQWGNII G+DL  +    + F LT PL+T + G KMGK+  GA++L+
Sbjct: 179 KIKNCRLQIGGDDQWGNIISGVDLIRKKNGSETFGLTFPLITRSDGKKMGKSEKGAVYLD 238

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITT 308
             + S Y+F+QY+RN  D+DV +F    T L   EI+ ++  +G  +N+AK+I+A EIT 
Sbjct: 239 SNLFSIYDFYQYFRNTSDSDVKTFLYLFTFLEEDEIELISNFKGNSLNKAKEILAFEITK 298

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
           +VHG  EA K   A+   F  S    ++P    S       + L+ L++ +    S +E 
Sbjct: 299 IVHGEAEALKVQEASFAAFRGSGDRSNIPFFKFSFSSPKEEILLVDLMLDSKIVPSKSEG 358

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           RR + S  + IN   + ++   +  +DF +   ++L  GKKN +   L
Sbjct: 359 RRLIDSGGVYINGKRVESQSHLLTKKDF-NNNEVELRVGKKNFLRIVL 405


>gi|283783150|ref|YP_003373904.1| tyrosine--tRNA ligase [Gardnerella vaginalis 409-05]
 gi|283441835|gb|ADB14301.1| tyrosine--tRNA ligase [Gardnerella vaginalis 409-05]
          Length = 439

 Score =  449 bits (1156), Expect = e-124,   Method: Composition-based stats.
 Identities = 136/421 (32%), Positives = 213/421 (50%), Gaps = 19/421 (4%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +     L  RG I Q ++ ++L        +T Y GYD TA+SLH G+L QL+ +  LQ 
Sbjct: 13  ASLFEELKWRGLISQSTDEQQLAQALDGEPLTYYCGYDPTAASLHIGNLVQLINMRHLQA 72

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH PI+L+GG T +IGDP    E R +     +    E+++      +    G+     
Sbjct: 73  AGHHPIALVGGATGLIGDPRQSGE-RTLNSKDIVAGWAERLRKQIGRIL-PLDGENPVRF 130

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           ++N  W+  +  ID LR++G  F V  MLS + V  RL  ++ +SF EF+Y +LQ  DF+
Sbjct: 131 VSNYDWVSKMSAIDFLRDVGKNFRVGTMLSKDIVARRLNSDEGISFAEFSYQVLQGNDFL 190

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L  NYD  LQ+GGSDQWGN+  G+DL  +++   +   TSP++T   G K GK+   A+
Sbjct: 191 YLFDNYDVTLQLGGSDQWGNLTSGMDLIRKVRGTSVNVFTSPIITDNQGRKFGKSEGNAM 250

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIA 303
           WL+  M SPY F+Q+W N  D +VV   K  T LP  EI+R+A+    +    EA++++A
Sbjct: 251 WLDPSMLSPYRFYQFWFNQPDDEVVKLLKVFTFLPKDEIERLAQQIQDDPGSREAQRVLA 310

Query: 304 TEITTMVHGREEAEKAATAAMECFDMS--------IHSQHMPTISISKDEVSRGMG---- 351
            E+T+ VHG +   +A  A+   F                +  + +  ++ S        
Sbjct: 311 WEVTSFVHGEDLTNQAIEASSALFGRGDLCNIDEQTLEAALDGVKVKAEDGSLDFAKAKV 370

Query: 352 ---LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGK 408
              ++   V AG   + +EARR +++  + +NN  +S     +    F       L  GK
Sbjct: 371 ADRVVEAAVAAGLFRTVSEARRAIEAGGLYLNNERVSGVDDVLSEGSFLHGRFALLRRGK 430

Query: 409 K 409
           K
Sbjct: 431 K 431


>gi|195941280|ref|ZP_03086662.1| tyrosyl-tRNA synthetase (tyrS) [Borrelia burgdorferi 80a]
          Length = 405

 Score =  449 bits (1156), Expect = e-124,   Method: Composition-based stats.
 Identities = 156/408 (38%), Positives = 238/408 (58%), Gaps = 7/408 (1%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           LS+L +RGF+ Q ++ + L  L  +  +  Y G D T+SSLH GHL   + +  L++ GH
Sbjct: 5   LSLLHKRGFLKQCTSLKVLSDLMDREKIVFYAGVDATSSSLHIGHLIPFLAMMHLRQHGH 64

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
            PI L+G  T+ IGDPS + E R+++ S+EI  N   IK       K+    T    ++N
Sbjct: 65  MPIVLIGDSTAKIGDPSGKSEMRKILSSEEIGNNALLIKNQLQRITKF----TSECFIHN 120

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL ++ YI+ LR++G  FSVNRMLSFE+ + R+  +  LSF+EFNY +LQ+YD+  L 
Sbjct: 121 SNWLDNLNYIEFLRDVGMHFSVNRMLSFETYKRRM--DFGLSFIEFNYQLLQSYDYYMLN 178

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
           K  +CRLQ+GG DQWGNII G+DL  +    + F LT PL+T + G KMGK+  GA++L+
Sbjct: 179 KIKNCRLQIGGDDQWGNIISGVDLIRKKNGSETFGLTFPLITRSDGKKMGKSEKGAVYLD 238

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITT 308
             + S Y+F+QY+RN  D+DV +F    T L   EI+ ++  +G  +N+AK+I+A EIT 
Sbjct: 239 SNLFSIYDFYQYFRNTSDSDVKTFLYLFTFLEEDEIELISNFKGNSLNKAKEILAFEITK 298

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
           +VHG  EA K   A+   F  S    ++P    S       + L+ L++ +    S +E 
Sbjct: 299 IVHGEAEALKVQEASFAAFRGSGDRSNIPFFKFSFSSPKEEILLVDLMLDSKIVPSKSEG 358

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           RR + S  + IN   + ++   +  +DF +   ++L  GKK  +   L
Sbjct: 359 RRLIDSGGVYINGKRVESQSHLLTKKDF-NNNEVELRVGKKKFLRIVL 405


>gi|224532002|ref|ZP_03672634.1| tyrosyl-tRNA synthetase [Borrelia valaisiana VS116]
 gi|224511467|gb|EEF81873.1| tyrosyl-tRNA synthetase [Borrelia valaisiana VS116]
          Length = 405

 Score =  449 bits (1155), Expect = e-124,   Method: Composition-based stats.
 Identities = 159/408 (38%), Positives = 237/408 (58%), Gaps = 7/408 (1%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L+ L +RGF+ Q ++ + L  L  +  +  Y G D T+SSLH GHL   + +  L++ GH
Sbjct: 5   LNRLHKRGFLKQCTSLKVLSDLMDREKIVFYAGVDATSSSLHIGHLIPFLAMMHLRQYGH 64

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
            PI L+G  T+ IGDPS + E R+++ S+EI  N   IK       K+ +       ++N
Sbjct: 65  IPIVLIGDSTTKIGDPSGKSEMRKILSSEEISNNAVLIKNQLQRITKFSSK----CFIHN 120

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL ++ YI+ LR+IG  FSVNRMLSFE+ + RL  +  LSF+EFNY +LQ+YD+  L 
Sbjct: 121 SNWLDNLNYIEFLRDIGIHFSVNRMLSFETYKRRL--DFGLSFIEFNYQLLQSYDYYMLN 178

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
           K  +CRLQ+GG DQWGNII G+DL  R    + F LT PL+T + G KMGK+  GA++L+
Sbjct: 179 KLENCRLQIGGDDQWGNIISGVDLIRRKFGAEAFGLTFPLITRSDGKKMGKSEKGAVYLD 238

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITT 308
             + S Y+F+QY+RN  D+DV +F    T L   EI+ ++  +G  +N+AK+I+A EIT 
Sbjct: 239 SNLYSIYDFYQYFRNTSDSDVKTFLYLFTFLEEDEIELISNFKGNSLNKAKEILAFEITK 298

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
           +VHG  EA K   A+   F  S    ++P    S   +   + L+ L++ +    S +E 
Sbjct: 299 IVHGEAEALKVQEASFAAFRGSGDRSNIPFFKFSFSSLEEEVLLINLMLDSKIVPSKSEG 358

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           RR + S  + IN   + N+   +   DF +   I+L  GKK  +   L
Sbjct: 359 RRLIDSGGVYINGKRVENQNHCLTRVDF-NNNEIELRVGKKKFLRIIL 405


>gi|295100837|emb|CBK98382.1| tyrosyl-tRNA synthetase [Faecalibacterium prausnitzii L2-6]
          Length = 406

 Score =  449 bits (1155), Expect = e-124,   Method: Composition-based stats.
 Identities = 165/391 (42%), Positives = 243/391 (62%), Gaps = 7/391 (1%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG + QI++   +D + + G  T YIG+D TA SL AGH   L L+  LQ  G
Sbjct: 3   LYEELKARGLVAQITDDEIID-VINNGKATFYIGFDCTADSLTAGHFMALTLMKRLQMAG 61

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           +KPI+L+GGGT++IGDPS R + R+M+  ++I  N    K     FI +  GK  ALMLN
Sbjct: 62  NKPIALIGGGTTMIGDPSGRTDMRKMLTKEDIAHNAACFKKQMEKFIDFSDGK--ALMLN 119

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL ++ Y++LLR++G+ FSVN ML  +    R+  E+ LSFLEFNYMI+Q+YDF  +
Sbjct: 120 NADWLLNLNYVELLRDVGACFSVNNMLRAKCYEQRM--EKGLSFLEFNYMIMQSYDFYYM 177

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            ++Y C +Q GG DQW N++ G +L  R      +A+T  LLT + G KMGKT   A+WL
Sbjct: 178 FQHYGCNMQFGGDDQWSNMLGGTELIRRKLGKDAYAMTITLLTDSQGKKMGKTAGNAVWL 237

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           +   TSP+ F+QYWRN+ D+DV+   + LT LP+ +ID M+  + + +NEAK+I+A E+T
Sbjct: 238 DPNKTSPFEFYQYWRNVGDSDVMKCIRMLTFLPLEQIDEMSTWKDQRLNEAKEILAFELT 297

Query: 308 TMVHGREEAEKAATAAMECFDMSI-HSQHMPTISISKDEVSRG-MGLLTLIVKAGFATST 365
            MVHG EEA KA  AA   F  +   ++HMP   +++ +++ G +G+LTL+VKAG A S 
Sbjct: 298 KMVHGEEEAAKAQNAARALFSGAAGDAEHMPNTQLTEADLTDGSIGILTLMVKAGLAASN 357

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
            EARR +    + ++   ++   +    +  
Sbjct: 358 GEARRLVVQGGVLVDGEKVAAPTVSFTAEQL 388


>gi|216264032|ref|ZP_03436026.1| tyrosyl-tRNA synthetase [Borrelia afzelii ACA-1]
 gi|215980076|gb|EEC20898.1| tyrosyl-tRNA synthetase [Borrelia afzelii ACA-1]
          Length = 405

 Score =  449 bits (1155), Expect = e-124,   Method: Composition-based stats.
 Identities = 157/408 (38%), Positives = 238/408 (58%), Gaps = 7/408 (1%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L++L +RGF+ Q ++ + L  L  +  +  Y G D T+SSLH GHL   + +  L++ GH
Sbjct: 5   LNLLHKRGFLKQCTSLKVLSDLMDREKIVFYAGVDATSSSLHIGHLIPFLAMMHLRQHGH 64

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
            PI L+G  T+ IGDPS + E R+++  +EI  N   IK       K+ +       ++N
Sbjct: 65  IPIVLIGDSTTKIGDPSGKSEMRKILSLEEISNNAFSIKNQLQRITKFSSK----CFIHN 120

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL ++ YI+ LR+IG  FS+NRMLSFE+ + RL  +  LSF+EFNY +LQ+YD+  L 
Sbjct: 121 SNWLDNLNYIEFLRDIGIHFSINRMLSFETYKKRL--DFGLSFIEFNYQLLQSYDYYMLN 178

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
           K  +CRLQ+GG DQWGNII GIDL  +    + F LT PL+T + G KMGK+  GA++L+
Sbjct: 179 KIRNCRLQIGGDDQWGNIISGIDLIRKKAGVETFGLTFPLITRSDGKKMGKSEKGAVYLD 238

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITT 308
             + S Y+F+QY+RN  D+DV +F    T L   EI+ ++  +G  +N+AK+I+A EIT 
Sbjct: 239 SSLYSIYDFYQYFRNTSDSDVKTFLYLFTFLEEDEIELISNFKGNSLNKAKEILAFEITK 298

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
           +VHG  EA K   A+   F  S    ++P    S   +   + L+ L++ +    S +E 
Sbjct: 299 IVHGEAEALKVQEASFAAFRGSGDRSNIPFFKFSFSNLEEEVLLINLMLDSKIVPSKSEG 358

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           RR + S  + IN   + N+   +  +DF +   I+L  GKK  +   L
Sbjct: 359 RRLIDSGGVYINGKRVENQNHCLTRKDF-NNNEIELRVGKKKFLRIVL 405


>gi|330718068|ref|ZP_08312668.1| tyrosyl-tRNA synthetase [Leuconostoc fallax KCTC 3537]
          Length = 417

 Score =  448 bits (1154), Expect = e-124,   Method: Composition-based stats.
 Identities = 145/417 (34%), Positives = 214/417 (51%), Gaps = 15/417 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           DFL  L  RG + Q+++   L      G + AY+G D TASS+H G+L  LM+L   Q  
Sbjct: 2   DFLEDLEWRGSLKQVTDAAGLRKAMQDGQIGAYVGVDPTASSIHIGNLIPLMVLKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHK + + GGGT  IGDPS +   R ++  ++I +N+E  K  F     +     D  ++
Sbjct: 62  GHKAVIIAGGGTGAIGDPSGKKNERTLLSLEQINDNVEAQKKQFQKLFGHDD---DFSIV 118

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  +   + LR+ G  FSVN M+  + V SRL     +SF EF Y ILQ  DF E
Sbjct: 119 NNNDWLGQLTLQEFLRDYGKLFSVNVMIKKDVVASRLDA--GISFTEFTYQILQGIDFHE 176

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKLFALTSPLLTTASGTKMGKTLSGA 244
           L +  + RLQ+GGSDQWGNI  GIDL   L+      F +T PL+  + GTK GK+   A
Sbjct: 177 LWRRENVRLQIGGSDQWGNITSGIDLIHTLEGNDAPAFGVTIPLMLNSDGTKFGKSEGNA 236

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKII 302
           IWL+ E TSPY F+Q+W N DD DVV + K  T L + EI+ +            A++ +
Sbjct: 237 IWLDAEKTSPYTFYQFWLNQDDRDVVKYLKFFTFLTVDEINELEVEVKDNPGQRLAQRRL 296

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS-----ISKDEVSR-GMGLLTLI 356
           A E+T  VHG+   ++A   +   F  +I    +  I      +   E       ++  +
Sbjct: 297 AQEVTKFVHGQAAVDEAEQLSQALFSGNISDLSVKQIQSVFSGVPSFEAESHAKNIVDFL 356

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
           V  G   S  +AR  +++ AI IN   +++   ++  Q       + +  GKK + +
Sbjct: 357 VDGGVEKSKRQAREDVQNGAITINGEKVTDVAFEVDPQSHYEGQYVLVRRGKKKYFL 413


>gi|227432816|ref|ZP_03914776.1| tyrosyl-tRNA synthetase [Leuconostoc mesenteroides subsp. cremoris
           ATCC 19254]
 gi|227351430|gb|EEJ41696.1| tyrosyl-tRNA synthetase [Leuconostoc mesenteroides subsp. cremoris
           ATCC 19254]
          Length = 417

 Score =  448 bits (1154), Expect = e-124,   Method: Composition-based stats.
 Identities = 139/424 (32%), Positives = 215/424 (50%), Gaps = 25/424 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG ++Q+++   L    + G + AY+G D TA SLH GHL   M+L   Q  
Sbjct: 4   NFIEDLKWRGALNQVTDEAGLIEAMASGEIGAYVGTDPTADSLHLGHLIPFMVLKRFQNA 63

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           G K + ++GG T  IGDP      R+++  +++++N + I    +    +G  KT   ++
Sbjct: 64  GGKAVIIIGGATGAIGDPRP-TTERQLLSPEQLRQNEKGITEQVTKL--FGDEKTA--IV 118

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  +   D LR+ G  FS+N ML  + V SRL  E  +SF EF Y ILQ  D+ E
Sbjct: 119 NNNDWLGKLTLTDFLRDYGKLFSINVMLKKDVVASRL--ETGISFTEFTYQILQGIDYHE 176

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKLFALTSPLLTTASGTKMGKTLSGA 244
           L + ++ +LQ+GGSDQWGNI  GIDL   ++      F LT PL+T +SG K GK+   A
Sbjct: 177 LWRRHNVQLQIGGSDQWGNITSGIDLIHSIEGNNATAFGLTIPLMTDSSGKKFGKSEGNA 236

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKII 302
           IWLN E TSPY F+Q+W N  D DVV + K  T L + EI+ + +          A+K +
Sbjct: 237 IWLNPEKTSPYTFYQFWYNQSDEDVVKYLKYFTFLGVDEINNLEQEAKNNPGGRIAQKRL 296

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGL 352
           A E+T  VHG +    A   +   F   + +            +P+  I+    S    +
Sbjct: 297 AQEVTKFVHGEQAVADAEKLSAALFSGDVANLSAADIADAFGGVPSFDIT----SEKKNV 352

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           +  +V      S  +AR  + + AI I+   +++   +I          + +  GKK + 
Sbjct: 353 VDFLVDGEIEKSKRQAREDVTNGAITISGEKVTDVNFEIDPTKHYDGEFVLVRRGKKKYF 412

Query: 413 ICHL 416
           +  +
Sbjct: 413 LGKV 416


>gi|332297576|ref|YP_004439498.1| Tyrosyl-tRNA synthetase [Treponema brennaborense DSM 12168]
 gi|332180679|gb|AEE16367.1| Tyrosyl-tRNA synthetase [Treponema brennaborense DSM 12168]
          Length = 412

 Score =  448 bits (1154), Expect = e-124,   Method: Composition-based stats.
 Identities = 162/412 (39%), Positives = 244/412 (59%), Gaps = 13/412 (3%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L  L ERGF  Q ++   L  L  +G VT Y+G D T  SLH GH+     L  L+  GH
Sbjct: 5   LETLKERGFFQQCTDIDGLSALMDKGPVTFYVGCDPTGPSLHVGHMVPFFALRHLRDAGH 64

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
             I+L+GGGT+ IGDPS + E R+M+   +I +N++KI+   + FI +      A+  NN
Sbjct: 65  VGIALVGGGTARIGDPSGKTEMRKMLTYDQIDDNVKKIEAQLNRFIGFD--GIHAMSDNN 122

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
           + WL  + YID LR+IGS FSVNRML+FES + R+  E  LSFLEFNY +LQ++DF++L 
Sbjct: 123 KFWLADLNYIDFLRDIGSCFSVNRMLTFESYKKRM--ETGLSFLEFNYQLLQSFDFLKLH 180

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
           + ++  LQ+GG DQWGNI+ G+DL  R    ++F LT PL+T + G KMGKT  GA++L+
Sbjct: 181 ERHNACLQIGGDDQWGNIVAGVDLIRRKTGDEVFGLTFPLITRSDGKKMGKTEKGALFLD 240

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITT 308
             +T  ++F+QYWRN+ DADV  F    T L ++E+D    +   +IN+AK+ +A E+T 
Sbjct: 241 PALTPIFDFFQYWRNVADADVRKFLLLFTFLSVAEVDA---IVSGDINKAKERLAWEVTA 297

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVS-RGMGLLTLIVKAGFATSTNE 367
           ++HG+ EA+ A   A   F        MPT ++     +  G+G++ L  ++  A + ++
Sbjct: 298 VIHGKAEADTALAGAKAAFGGGGDRASMPTATLPAALFAGEGIGVVDLFFESKLAATKSD 357

Query: 368 ARRHLKSNAIKINN-----SIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           ARR ++     +       + + +   +I   DFD +G + L  GKK  I  
Sbjct: 358 ARRLVQQGGAYMTGADGTETQLQDIAAKITAADFDGSGELILRAGKKKFIRV 409


>gi|285808403|gb|ADC35930.1| putative tyrosyl-tRNA synthetase [uncultured bacterium 70]
          Length = 414

 Score =  448 bits (1154), Expect = e-124,   Method: Composition-based stats.
 Identities = 150/415 (36%), Positives = 233/415 (56%), Gaps = 17/415 (4%)

Query: 17  FIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGG 76
            ++  +    L  L +   +T YIG+D TASSLH G L  +M L  LQ+ GH PI+++GG
Sbjct: 1   MVYDAT--EGLAELLATQSLTGYIGFDPTASSLHVGSLLTVMGLARLQRCGHTPIAIVGG 58

Query: 77  GTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIK 136
           GT +IGDPS + + R ++ S+ + +N+  ++     F+ +  G   A ++NN  WL +I 
Sbjct: 59  GTGMIGDPSGKSQERVLLSSELLDQNVAGVRAQLERFLDFSAGSHQARLVNNAEWLGAID 118

Query: 137 YIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQ 196
            +  LR+ G  F+VN ML  ESV  RL+ E  +SF EF+Y++LQAYD+++L   Y C +Q
Sbjct: 119 LLSFLRDAGKHFTVNYMLQKESVSRRLESEDGISFTEFSYLVLQAYDYLQLFDRYGCTVQ 178

Query: 197 MGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYN 256
           MGGSDQWGNI  GIDL  +L+  K   L  PL+ TA+GTK GKT +G +WL+   TSP+ 
Sbjct: 179 MGGSDQWGNITAGIDLIRKLRAKKAHGLVWPLMKTAAGTKFGKTEAGTVWLDAARTSPFK 238

Query: 257 FWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEITTMVHGRE 314
           F+Q+W N DD+DV+++ K  T L    I+          E  EA++++A E+TT+VHG E
Sbjct: 239 FYQFWVNTDDSDVIAYLKFFTFLDRPAIEALEGVTRTAPEKREAQRVLAREVTTLVHGAE 298

Query: 315 EAEKAATAAMECFDMSIHS----------QHMPTISISKDEVS-RGMGLLTLIVK--AGF 361
              +A  A+   F   I +            +P+  +S       GM L+ L+       
Sbjct: 299 HVTRAEHASSVLFGEDIATLSADQVLAVFSDVPSSEVSGAAFEGAGMLLVELLADPAVKL 358

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           A S +EARR ++S  + +NN   S+ ++++  +         +  G+K + +  L
Sbjct: 359 APSKSEARRLVQSGGVYVNNRRASDVQMRLTREQAIEGVLFVVRKGQKQNHVVRL 413


>gi|97537355|sp|O83806|SYY_TREPA RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
          Length = 409

 Score =  448 bits (1153), Expect = e-124,   Method: Composition-based stats.
 Identities = 147/409 (35%), Positives = 220/409 (53%), Gaps = 9/409 (2%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L+ L  RGFI Q ++   L      G +T Y+G D T SSLH GH+  +  L  L   GH
Sbjct: 5   LARLQARGFIRQCTDLSALSARMDAGPLTFYVGVDPTGSSLHVGHMLPMFALKHLCDAGH 64

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           +   L+GGGT+ IGDPS +   R+M+    +      I      F+ +         +NN
Sbjct: 65  RGCVLIGGGTARIGDPSGKTSMRKMLDYATLDAYAGAIVAQLDHFLSFD--HRHVFYVNN 122

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL  + YID LRE+G+ FSVN+ML++E+ + RL  E  LSFLEFNY +LQ+YDF+ L+
Sbjct: 123 RDWLAHLNYIDFLREVGAHFSVNKMLTYEAYKKRL--ETGLSFLEFNYQLLQSYDFLTLS 180

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
             Y   LQ+GG DQWGNI+ G DL  R++   +  LT PL+T A G KMGKT  GA++L+
Sbjct: 181 DRYAVELQIGGDDQWGNIVAGADLVRRVRGKTVHGLTFPLITRADGQKMGKTEQGALFLD 240

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITT 308
             + SPY+F+QYWRN  D DV  F    T L + +++ +       IN AK+++A E+T 
Sbjct: 241 PALVSPYDFFQYWRNTPDEDVRRFLLLFTFLSVRDVEAILTQG---INCAKELLAYEVTR 297

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
           ++HG   A+ A   A   F        +PT  +++  +  G+ +  L V+ G  T+ ++A
Sbjct: 298 LMHGTAVAQVALQGARAAFGGCGDKCALPTFELTQCTLQVGIKVTDLFVQVGLCTTKSDA 357

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           RR +      +    +++    I     D  G + +  GKK   +  + 
Sbjct: 358 RRLIAQGGAFVGLQRVADIGAVIDQSALDLDGTVIVRAGKKR--VVRIV 404


>gi|116619116|ref|YP_819487.1| tyrosyl-tRNA synthetase [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
 gi|122270684|sp|Q03UK8|SYY_LEUMM RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|116097963|gb|ABJ63114.1| tyrosyl-tRNA synthetase [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
          Length = 415

 Score =  448 bits (1153), Expect = e-124,   Method: Composition-based stats.
 Identities = 139/424 (32%), Positives = 215/424 (50%), Gaps = 25/424 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG ++Q+++   L    + G + AY+G D TA SLH GHL   M+L   Q  
Sbjct: 2   NFIEDLKWRGALNQVTDEAGLIEAMASGEIGAYVGTDPTADSLHLGHLIPFMVLKRFQNA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           G K + ++GG T  IGDP      R+++  +++++N + I    +    +G  KT   ++
Sbjct: 62  GGKAVIIIGGATGAIGDPRP-TTERQLLSPEQLRQNEKGITEQVTKL--FGDEKTA--IV 116

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  +   D LR+ G  FS+N ML  + V SRL  E  +SF EF Y ILQ  D+ E
Sbjct: 117 NNNDWLGKLTLTDFLRDYGKLFSINVMLKKDVVASRL--ETGISFTEFTYQILQGIDYHE 174

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKLFALTSPLLTTASGTKMGKTLSGA 244
           L + ++ +LQ+GGSDQWGNI  GIDL   ++      F LT PL+T +SG K GK+   A
Sbjct: 175 LWRRHNVQLQIGGSDQWGNITSGIDLIHSIEGNNATAFGLTIPLMTDSSGKKFGKSEGNA 234

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKII 302
           IWLN E TSPY F+Q+W N  D DVV + K  T L + EI+ + +          A+K +
Sbjct: 235 IWLNPEKTSPYTFYQFWYNQSDEDVVKYLKYFTFLGVDEINNLEQEAKNNPGGRIAQKRL 294

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGL 352
           A E+T  VHG +    A   +   F   + +            +P+  I+    S    +
Sbjct: 295 AQEVTKFVHGEQAVADAEKLSAALFSGDVANLSAADIADAFGGVPSFDIT----SEKKNV 350

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           +  +V      S  +AR  + + AI I+   +++   +I          + +  GKK + 
Sbjct: 351 VDFLVDGEVEKSKRQAREDVTNGAITISGEKVTDVNFEIDPTKHYDGEFVLVRRGKKKYF 410

Query: 413 ICHL 416
           +  +
Sbjct: 411 LGKV 414


>gi|118587440|ref|ZP_01544865.1| tyrosyl-tRNA synthetase [Oenococcus oeni ATCC BAA-1163]
 gi|118432090|gb|EAV38831.1| tyrosyl-tRNA synthetase [Oenococcus oeni ATCC BAA-1163]
          Length = 439

 Score =  448 bits (1153), Expect = e-124,   Method: Composition-based stats.
 Identities = 148/421 (35%), Positives = 219/421 (52%), Gaps = 17/421 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D +  L  RG I Q ++   L  L     ++ Y+G D TA S+H G+L  L +L   Q  
Sbjct: 24  DIIEDLKWRGSIKQTTDESGLANLLKHKKISLYVGVDPTAKSIHIGNLIPLTILKRFQNA 83

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+P+ ++GGGT +IGDPS +   R+++      EN+ +I    +       GK    ++
Sbjct: 84  GHRPVIVVGGGTGMIGDPSGKASERKLLPKDVFDENVSRITKQMTRLF----GKDGFEIV 139

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  +  I  LR+ G  FS+N ML  + V SRL+    +SF EF Y ILQA DF  
Sbjct: 140 NNYDWLSKLDLISFLRDYGKLFSINVMLKRDVVASRLQA--GISFTEFTYQILQAIDFYT 197

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSGA 244
           L K    +LQ+GG+DQ+GNI  G++L  +L  P  + F LT PLL  + GTK GK+  GA
Sbjct: 198 LFKEKAVQLQVGGADQYGNISSGVELIHKLVGPDTEAFGLTVPLLLKSDGTKFGKSAGGA 257

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKII 302
           IWL+ E  SPY F+Q++ N  DADVV   K  T L   EI+ +A       E  EA++ +
Sbjct: 258 IWLDPEFLSPYEFYQFFYNQTDADVVKLLKIFTFLNREEIEELADKVKNEPEKREAQRRL 317

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVS------RGMGLLTLI 356
           A E+T  VHG+   E+A   +   F+  + +  +  ++++   V       +   ++ L+
Sbjct: 318 AEEVTKFVHGQTAVEEAEKISRILFNGDVENLTVSQVAVAFSGVPTIEVADQKTDVVELL 377

Query: 357 VKAG-FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           VK      S  +AR  LK+ AI IN   ISN    I   +      I +  GKK + +  
Sbjct: 378 VKDKVIEKSRRQAREDLKNGAITINGEKISNVNGVIDPTEKFDGRFIIIRRGKKKYFLAK 437

Query: 416 L 416
           +
Sbjct: 438 V 438


>gi|15639820|ref|NP_219270.1| tyrosyl-tRNA synthetase (tyrS) [Treponema pallidum subsp. pallidum
           str. Nichols]
 gi|189026058|ref|YP_001933830.1| tyrosyl-tRNA synthetase [Treponema pallidum subsp. pallidum SS14]
 gi|3323143|gb|AAC65798.1| tyrosyl-tRNA synthetase (tyrS) [Treponema pallidum subsp. pallidum
           str. Nichols]
 gi|189018633|gb|ACD71251.1| tyrosyl-tRNA synthetase [Treponema pallidum subsp. pallidum SS14]
 gi|291060191|gb|ADD72926.1| tyrosyl-tRNA synthetase [Treponema pallidum subsp. pallidum str.
           Chicago]
          Length = 416

 Score =  448 bits (1152), Expect = e-123,   Method: Composition-based stats.
 Identities = 147/409 (35%), Positives = 220/409 (53%), Gaps = 9/409 (2%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L+ L  RGFI Q ++   L      G +T Y+G D T SSLH GH+  +  L  L   GH
Sbjct: 12  LARLQARGFIRQCTDLSALSARMDAGPLTFYVGVDPTGSSLHVGHMLPMFALKHLCDAGH 71

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           +   L+GGGT+ IGDPS +   R+M+    +      I      F+ +         +NN
Sbjct: 72  RGCVLIGGGTARIGDPSGKTSMRKMLDYATLDAYAGAIVAQLDHFLSFD--HRHVFYVNN 129

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL  + YID LRE+G+ FSVN+ML++E+ + RL  E  LSFLEFNY +LQ+YDF+ L+
Sbjct: 130 RDWLAHLNYIDFLREVGAHFSVNKMLTYEAYKKRL--ETGLSFLEFNYQLLQSYDFLTLS 187

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
             Y   LQ+GG DQWGNI+ G DL  R++   +  LT PL+T A G KMGKT  GA++L+
Sbjct: 188 DRYAVELQIGGDDQWGNIVAGADLVRRVRGKTVHGLTFPLITRADGQKMGKTEQGALFLD 247

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITT 308
             + SPY+F+QYWRN  D DV  F    T L + +++ +       IN AK+++A E+T 
Sbjct: 248 PALVSPYDFFQYWRNTPDEDVRRFLLLFTFLSVRDVEAILTQG---INCAKELLAYEVTR 304

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
           ++HG   A+ A   A   F        +PT  +++  +  G+ +  L V+ G  T+ ++A
Sbjct: 305 LMHGTAVAQVALQGARAAFGGCGDKCALPTFELTQCTLQVGIKVTDLFVQVGLCTTKSDA 364

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           RR +      +    +++    I     D  G + +  GKK   +  + 
Sbjct: 365 RRLIAQGGAFVGLQRVADIGAVIDQSALDLDGTVIVRAGKKR--VVRIV 411


>gi|258620729|ref|ZP_05715764.1| tyrosyl-tRNA synthetase [Vibrio mimicus VM573]
 gi|258586927|gb|EEW11641.1| tyrosyl-tRNA synthetase [Vibrio mimicus VM573]
          Length = 426

 Score =  447 bits (1151), Expect = e-123,   Method: Composition-based stats.
 Identities = 150/421 (35%), Positives = 222/421 (52%), Gaps = 13/421 (3%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           F   L +RG I Q +    L    +      Y G+D TA SLH GHL  L++L   Q  G
Sbjct: 6   FFDDLQQRGLIAQSTPLEALVERFAT-PQVLYCGFDPTAGSLHIGHLVPLLMLKRFQNAG 64

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM-L 126
           H+ I+L+GG T +IGDPSF+   R +  +Q +Q+ +  +    +  +   +    +L+ +
Sbjct: 65  HQAIALIGGATGMIGDPSFKANERALNSAQTVQQWVNDLSQQITHLMASQSENPTSLITV 124

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDFV 185
           NN  W+  I  ID  R++G  FSVN M++ ESV+ RL R +Q +SF EF+Y +LQ+YDF 
Sbjct: 125 NNADWIGKINLIDFFRDVGKHFSVNTMINRESVKQRLARPDQGISFTEFSYSLLQSYDFA 184

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L   + C LQ+GG+DQWGNI+ GIDL  RL   ++  LT PL+T + GTK GKT SGA+
Sbjct: 185 HLNLEFGCALQIGGNDQWGNIVSGIDLTRRLNGAEVCGLTLPLITKSDGTKFGKTESGAV 244

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIA 303
           WL    TSPY F+Q+W N DDADV  F    T L  +EI+ + +     +   +A++I+A
Sbjct: 245 WLESSKTSPYRFYQFWLNSDDADVYRFLAYYTFLSTAEIEDIRQADALCEGKPQAQQILA 304

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRGMGLLTLIV 357
            ++T  VHG E    A       F   +    +  +       +     SR   LL L++
Sbjct: 305 EQVTRFVHGEEGLAAAQRITQALFSGDLSYLSLSELRQLELDGLPCVAASRTDTLLDLLL 364

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            +G A+S  +AR  L + A+++N   +  E   +            L  GKK   +  L 
Sbjct: 365 TSGLASSKRQAREWLDNGAVRVNGERVQQEG--VLSGFALFDRYYVLQRGKKQFALIKLE 422

Query: 418 G 418
           G
Sbjct: 423 G 423


>gi|223889015|ref|ZP_03623606.1| tyrosyl-tRNA synthetase [Borrelia burgdorferi 64b]
 gi|223885831|gb|EEF56930.1| tyrosyl-tRNA synthetase [Borrelia burgdorferi 64b]
          Length = 405

 Score =  447 bits (1151), Expect = e-123,   Method: Composition-based stats.
 Identities = 157/406 (38%), Positives = 239/406 (58%), Gaps = 7/406 (1%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           LS+L +RGF+ Q ++ + L  L  +  +  Y G D T+SSLH GHL   + + +L++ GH
Sbjct: 5   LSLLHKRGFLKQCTSLKVLSDLMDREKIVFYAGVDATSSSLHIGHLIPFLAMMYLRQHGH 64

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
            PI L+G  T+ IGDPS + E R+++ S+EI  N   IK       K+    T    ++N
Sbjct: 65  MPIVLIGDSTAKIGDPSGKSEMRKILSSEEIGNNALLIKNQLQRITKF----TSECFIHN 120

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL ++ YI+ LR++G  FSVNRMLSFE+ + RL  +  LSF+EFNY +LQ+YD+  L 
Sbjct: 121 SNWLDNLNYIEFLRDVGIHFSVNRMLSFETYKRRL--DFGLSFIEFNYQLLQSYDYYMLN 178

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
           K  +CRLQ+GG DQWGNII GIDL  +    + F LT PL+T + G KMGK+  GA++L+
Sbjct: 179 KIKNCRLQIGGDDQWGNIISGIDLIRKKNGSETFGLTFPLITRSDGKKMGKSEKGAVYLD 238

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITT 308
             + S Y+F+QY+RN  D+DV +F    T L   EI+ ++  +G  +N+AK+I+A EIT 
Sbjct: 239 SNLFSIYDFYQYFRNTSDSDVKTFLYLFTFLEEDEIELISNFKGNSLNKAKEILAFEITK 298

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
           +VHG  EA K   A+   F  S    ++P    S   +   + L+ L++ +    S +E 
Sbjct: 299 IVHGEAEALKVQEASFAAFRGSGDRSNIPFFKFSFSSLKEEILLVDLMLDSKIVPSKSEG 358

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           RR + S  + IN   + ++   +  +DF +   ++L  GKK  +  
Sbjct: 359 RRLIDSGGVYINGKRVESQSHLLTKKDF-NNNEVELRVGKKKFLRI 403


>gi|26554251|ref|NP_758185.1| tyrosyl-tRNA synthetase [Mycoplasma penetrans HF-2]
 gi|81747514|sp|Q8EUX2|SYY_MYCPE RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|26454260|dbj|BAC44589.1| tyrosyl-tRNA synthetase [Mycoplasma penetrans HF-2]
          Length = 411

 Score =  447 bits (1150), Expect = e-123,   Method: Composition-based stats.
 Identities = 177/409 (43%), Positives = 254/409 (62%), Gaps = 5/409 (1%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
            + L  L +RG+I+Q SN   ++    +G  + YIG+D TA SLH GH   +M +  LQK
Sbjct: 4   KNILEFLKKRGYIYQGSNFDLIEKELIKG-TSFYIGFDPTADSLHVGHFLTMMAVKHLQK 62

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            G+ P+ ++GGGT  +GDPS R E R+++  + I  N E +K   S FI +  GK  A+M
Sbjct: 63  AGNNPVIVVGGGTGSVGDPSGRSEIRKILDRKTIDYNCECLKKQMSKFISF-EGKNKAVM 121

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  WL  I +I+ LRE G  FSVN+ML+ E+ + R ++E  LSFLEFNYM++QAYDF 
Sbjct: 122 VNNADWLLKINWIEFLREFGVCFSVNKMLAAEAFKVRFEQESGLSFLEFNYMLMQAYDFY 181

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L +NY+  +Q+GGSDQW NI+ G+DL  R  + + FALT  LLT   GTKMGKT +GAI
Sbjct: 182 YLNQNYNVNIQLGGSDQWSNILAGVDLIRRKSSKEAFALTLNLLTKHDGTKMGKTATGAI 241

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
           WL+K  TSPY F+QYW NIDD DV  F   LT L    I  + K +GK+I EAKK++A+E
Sbjct: 242 WLDKNKTSPYEFYQYWLNIDDQDVERFLLLLTELDDKTISDLCKEKGKKIVEAKKVLASE 301

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           +T M+HG+EE +KA   +   F+    S ++PT  +   +++    +  ++V    + S 
Sbjct: 302 LTKMIHGQEELDKAIEQSKAAFEN--ASDNLPTYELKASDLNNDYSIANILVVTKLSPSK 359

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            E+RR + SNA+ +N + I++   +++    D T    L  GKKNHI  
Sbjct: 360 AESRRLITSNAVSVNETKITDVNTKLEDLKIDQTNFT-LHKGKKNHIKV 407


>gi|224533693|ref|ZP_03674281.1| tyrosyl-tRNA synthetase [Borrelia burgdorferi CA-11.2a]
 gi|226320413|ref|ZP_03795980.1| tyrosyl-tRNA synthetase [Borrelia burgdorferi 29805]
 gi|224512986|gb|EEF83349.1| tyrosyl-tRNA synthetase [Borrelia burgdorferi CA-11.2a]
 gi|226234166|gb|EEH32880.1| tyrosyl-tRNA synthetase [Borrelia burgdorferi 29805]
          Length = 405

 Score =  447 bits (1150), Expect = e-123,   Method: Composition-based stats.
 Identities = 155/406 (38%), Positives = 237/406 (58%), Gaps = 7/406 (1%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           LS+L +RGF+ Q ++ + L  L  +  +  Y G D T+SSLH GHL   + +  L++ GH
Sbjct: 5   LSLLHKRGFLKQCTSLKVLSDLMDREKIVFYAGVDATSSSLHIGHLIPFLAMMHLRQHGH 64

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
            PI L+G  T+ IGDPS + E R+++ S+EI  N   IK       K+    T    ++N
Sbjct: 65  MPIVLIGDSTAKIGDPSGKSEMRKILSSEEIGNNALLIKNQLQRITKF----TSECFIHN 120

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL ++ YI+ LR++G  FSVNRMLSFE+ + R+  +  LSF+EFNY +LQ+YD+  L 
Sbjct: 121 SNWLDNLNYIEFLRDVGMHFSVNRMLSFETYKRRM--DFGLSFIEFNYQLLQSYDYYMLN 178

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
           K  +CRLQ+GG DQWGNII G+DL  +    + F LT PL+T + G KMGK+  GA++L+
Sbjct: 179 KIKNCRLQIGGDDQWGNIISGVDLIRKKNGSETFGLTFPLITRSDGKKMGKSEKGAVYLD 238

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITT 308
             + S Y+F+QY+RN  D+DV +F    T L   EI+ ++  +G  +N+AK+I+A EIT 
Sbjct: 239 SNLFSIYDFYQYFRNTSDSDVKTFLYLFTFLEEDEIELISNFKGNSLNKAKEILAFEITK 298

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
           +VHG  EA K   A+   F  S    ++P    S       + L+ L++ +    S +E 
Sbjct: 299 IVHGEAEALKVQGASFAAFRGSGDRSNIPFFKFSFSSPKEEILLVDLMLDSKIVPSKSEG 358

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           RR + S  + IN   + ++   +  +DF +   ++L  GKK  +  
Sbjct: 359 RRLIDSGGVYINGKRVESQSHLLTKKDF-NNNEVELRVGKKKFLRI 403


>gi|119475789|ref|ZP_01616142.1| tyrosyl-tRNA synthetase [marine gamma proteobacterium HTCC2143]
 gi|119451992|gb|EAW33225.1| tyrosyl-tRNA synthetase [marine gamma proteobacterium HTCC2143]
          Length = 435

 Score =  446 bits (1149), Expect = e-123,   Method: Composition-based stats.
 Identities = 140/435 (32%), Positives = 227/435 (52%), Gaps = 20/435 (4%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M       L  L  RG I Q +  +EL+   +    T Y G+D TA SLH G L  L+ L
Sbjct: 1   MSINGKALLDDLRSRGLIAQATAEQELEDHLTGACRTLYCGFDPTADSLHIGSLVPLLTL 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GHKP++L+GG T +IGDPSF+ E R++     + + +EK+K     +I +  G 
Sbjct: 61  RRFQQAGHKPLALVGGATGLIGDPSFKAEERKLNTPDVVSDWVEKLKAQVGRYIDFDCGD 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMIL 179
           + A ++NN  W+  +  +  LR+IG  F VN+M+  ESV+ R+ R    +S+ EF+YM+L
Sbjct: 121 SSADVVNNLDWVGEMDVLSFLRDIGKHFPVNQMIKKESVKQRIDRDGDGISYTEFSYMVL 180

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK 239
           Q+ DF EL  +  C LQ+GGSDQWGNI  G++L  R    +++ LT PL+T A GTK GK
Sbjct: 181 QSLDFSELFHSRHCTLQIGGSDQWGNITGGVELSRRRFGGQVYGLTLPLVTKADGTKFGK 240

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE-- 297
           + +G IWL+   TSPY F+Q+W N  DAD   F +  T L + +I  + +   K      
Sbjct: 241 SETGTIWLDPAKTSPYAFYQFWLNTADADAYRFLRYFTFLSVDQIAGIEQEDAKAEGRPT 300

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS-----------QHMPTISISKDEV 346
            ++++A E+T +VHG E    A   +   F   +               +P+ ++ + + 
Sbjct: 301 GQRVLAEEVTRLVHGDEGLSAARRISSSLFSGDLSEMSESDFRQLRLDGLPSSTLERSDF 360

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSII-SNEKLQIK----LQDFDSTGN 401
            +G+ L  ++  +G A S  + +  L   ++ IN   + S++ + ++             
Sbjct: 361 -KGLSLTQILTDSGMAASGKQVKDALGRRSVLINGVSVGSDDNMNVEGCLPASRGLHGAY 419

Query: 402 IKLSFGKKNHIICHL 416
             +  GKK + +  +
Sbjct: 420 YLVKLGKKKYHLFEV 434


>gi|223985754|ref|ZP_03635798.1| hypothetical protein HOLDEFILI_03104 [Holdemania filiformis DSM
           12042]
 gi|223962264|gb|EEF66732.1| hypothetical protein HOLDEFILI_03104 [Holdemania filiformis DSM
           12042]
          Length = 429

 Score =  446 bits (1148), Expect = e-123,   Method: Composition-based stats.
 Identities = 136/417 (32%), Positives = 207/417 (49%), Gaps = 18/417 (4%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           +      L  RG I  +S+P  L    + G +T YIG D T  SLH GH +  ++   L+
Sbjct: 21  QMGIYEELEWRGLIKDVSSPE-LREKLNAGGMTFYIGTDPTGDSLHIGHFSSFLISKRLK 79

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GH PI L+GGGT +IGDP   D  R M+  +E+  N E +K        +        
Sbjct: 80  DAGHNPILLVGGGTGLIGDPKP-DAERPMVTKEEVNHNYECLKKQAEKVFGFE------- 131

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           ++NN  W   I +ID LR+ G +F++N ML+ + VR RL     +++ EF+YM++QA DF
Sbjct: 132 VVNNYDWYKDINFIDFLRDYGKYFNINYMLNKDIVRRRLDA--GITYTEFSYMLMQAMDF 189

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L +N  C LQ+ G DQWGNI  GI+L  +    + +  T PLLT + GTK GKT   A
Sbjct: 190 WWLHENKGCTLQVAGQDQWGNITAGIELIRKKTGKEAYGFTMPLLTKSDGTKFGKTNGHA 249

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKII 302
           IWL+   TS Y  +Q++ N +D  V+ + K LT L   EI+           + EA K +
Sbjct: 250 IWLDINKTSAYEMYQFFINSEDNKVIDYLKFLTFLSREEIEALEEKNRTEPHLREAHKTL 309

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI-----SISKDEVSRGMGLLTLIV 357
           A E+ T +HG E    A   A   F  ++    +  +      + +  +     LL ++V
Sbjct: 310 AKEVITFIHGEEAYNTAIKIAQTLFGGNLKDLTVEELKQGISDMPRFTIEDKQPLLDVLV 369

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
             G A S  E R  +   +I++N   +++    +   +  +     L  GKKN+ +C
Sbjct: 370 ATGIAKSKREGREWIAGGSIQVNGEKVTDPMTPVCRSEAFNQEFTILRKGKKNYFVC 426


>gi|262164083|ref|ZP_06031822.1| tyrosyl-tRNA synthetase [Vibrio mimicus VM223]
 gi|262027611|gb|EEY46277.1| tyrosyl-tRNA synthetase [Vibrio mimicus VM223]
          Length = 426

 Score =  446 bits (1148), Expect = e-123,   Method: Composition-based stats.
 Identities = 152/421 (36%), Positives = 222/421 (52%), Gaps = 13/421 (3%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L +RG I Q ++   L    +      Y G+D TA SLH GHL  L++L   Q  G
Sbjct: 6   LFDDLQQRGLIAQSTSLEALIERFAT-PQVLYCGFDPTAGSLHIGHLVPLLMLKRFQNAG 64

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM-L 126
           H+ I+L+GG T +IGDPSF+   R +  +Q +Q+ +  +    +  +   +     L+ +
Sbjct: 65  HQAIALIGGATGMIGDPSFKANERVLNSAQTVQQWVSDLSQQITHLMTSQSENPAPLITV 124

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDFV 185
           NN  W+  I  ID  R++G  FSVN M++ ESV+ RL R +Q +SF EF+Y +LQ+YDF 
Sbjct: 125 NNADWIGKINLIDFFRDVGKHFSVNTMINRESVKQRLARPDQGISFTEFSYSLLQSYDFA 184

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L + + C LQ+GG+DQWGNI+ GIDL  RL   ++  LT PL+T + GTK GKT SGA+
Sbjct: 185 HLNREFGCALQIGGNDQWGNIVSGIDLTRRLNGAEVCGLTLPLITKSDGTKFGKTESGAV 244

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIA 303
           WL    TSPY F+Q+W N DDADV  F    T L  +EI+  R A    +   +A++I+A
Sbjct: 245 WLESSKTSPYRFYQFWLNSDDADVYRFLAYYTFLSTAEIEDIRQADALREGKPQAQQILA 304

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRGMGLLTLIV 357
             +T  VHG E    A       F   +    +  +       +     SR   LL L++
Sbjct: 305 EHVTRFVHGEEGLAAAQRITQALFSGDLSYLSLSELRQLELDGLPCVAASRTDTLLDLLL 364

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            +G A+S  +AR  L++ AI++N   +  E   +            L  GKK   +  L 
Sbjct: 365 NSGLASSKRQAREWLENGAIRVNGERVLQEG--VLSGFALFDRYYVLQRGKKQFALIKLE 422

Query: 418 G 418
           G
Sbjct: 423 G 423


>gi|225552404|ref|ZP_03773344.1| tyrosyl-tRNA synthetase [Borrelia sp. SV1]
 gi|225371402|gb|EEH00832.1| tyrosyl-tRNA synthetase [Borrelia sp. SV1]
          Length = 405

 Score =  446 bits (1147), Expect = e-123,   Method: Composition-based stats.
 Identities = 157/408 (38%), Positives = 236/408 (57%), Gaps = 7/408 (1%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           LS+L +RGF+ Q ++ + L  L  +  +  Y G D T+SSLH GHL   + +  L++ GH
Sbjct: 5   LSLLHKRGFLKQCTSLKVLSDLMDREKIVFYAGVDATSSSLHIGHLIPFLAMMHLRQHGH 64

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
            PI L+G  T+ IGDPS + E R+++ S+EI  N   IK       K+    T    ++N
Sbjct: 65  IPIVLIGDSTAKIGDPSGKSEMRKILSSEEIGNNALLIKNQLQRITKF----TSECFIHN 120

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL ++ YI+ LR+IG  FSVNRMLSFE+ + RL  +  LSF+EFNY +LQ+YD+  L 
Sbjct: 121 SNWLDNLNYIEFLRDIGMHFSVNRMLSFETYKRRL--DFGLSFIEFNYQLLQSYDYYMLN 178

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
           K  +CRLQ+GG DQWGNII G+DL  +    + F LT PL+T + G KMGKT  GA++L+
Sbjct: 179 KIKNCRLQIGGDDQWGNIISGVDLIRKKNRSETFGLTFPLITRSDGKKMGKTEKGAVYLD 238

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITT 308
             + S Y+F+QY+RN  D+DV +F    T L   EI+ ++  +   +N+AK+I+A EIT 
Sbjct: 239 SNLFSIYDFYQYFRNTSDSDVKTFLYLFTFLEEDEIELISNFKRNSLNKAKEILAFEITK 298

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
           +VHG  EA K   A+   F       ++P    S       + L+ L++ +    S +E 
Sbjct: 299 IVHGEAEALKVQEASFAAFRGGGDRSNIPFFKFSFSSPKEEILLVDLMLDSKIVPSKSEG 358

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           RR + S  + IN   + ++   +  +DF +   ++L  GKK  +   L
Sbjct: 359 RRLIDSGGVYINGKRVESQSHLLTKKDF-NNNEVELRVGKKKFLRIVL 405


>gi|317496029|ref|ZP_07954391.1| tyrosyl-tRNA synthetase [Gemella moribillum M424]
 gi|316913933|gb|EFV35417.1| tyrosyl-tRNA synthetase [Gemella moribillum M424]
          Length = 417

 Score =  445 bits (1146), Expect = e-123,   Method: Composition-based stats.
 Identities = 141/423 (33%), Positives = 220/423 (52%), Gaps = 22/423 (5%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ L  L  R  ++Q ++   +  L     V+ Y G D T  SLH GHL   + L    K
Sbjct: 2   SNLLEELKYRDLVYQQTDEEGIKKLLETESVSIYCGTDPTGDSLHVGHLLPFLTLKRFAK 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP+ L+GGGT IIGDPS R E R++   + I EN +K++    +  +   G  +   
Sbjct: 62  YGHKPVVLVGGGTGIIGDPSGRSEERQLQSLETIAENAKKLENQLRNIFR---GDENIEF 118

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  WL  +  I+ LR+ G   +VN ML+ +SV SRL  E  LSF EF+Y +LQ  D+ 
Sbjct: 119 VNNGDWLGKMSMIEFLRDFGKLINVNYMLAKDSVSSRL--ENGLSFTEFSYTLLQGIDYA 176

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERL-KTPKLFALTSPLLTTASGTKMGKTLSGA 244
            L +++  ++Q+GGSDQWGNI  G+++  +L    + +  T PL+  + GTK GK+  GA
Sbjct: 177 YLNEHHGVKMQLGGSDQWGNITTGLEIMRKLRGDVEAYGFTIPLMLKSDGTKFGKSTGGA 236

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKII 302
           +WL+ E T+PY F+Q+W N  D D +S  K+ T L   EI+++ +   KE     A+K +
Sbjct: 237 VWLDPEKTTPYEFYQFWFNTADNDTISAIKKFTFLEKEEIEKLEESLAKEPHLRLAQKAL 296

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGL 352
           A E+  +VHG    E A       F  +I            + MP   + KD+    + +
Sbjct: 297 AEELVKIVHGEAALESALNITKALFSGNIKELTLDELKVAVKGMPKAQLPKDD----INI 352

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           +  +V++G  TS  +AR  + + AI IN   +++    +            +  GKKN+ 
Sbjct: 353 VDFLVESGVVTSKRQAREDVNNGAISINGDKVTDLAFTVDSSSRLEDSFTVVRRGKKNYK 412

Query: 413 ICH 415
           +  
Sbjct: 413 LVE 415


>gi|124002514|ref|ZP_01687367.1| tyrosyl-tRNA synthetase [Microscilla marina ATCC 23134]
 gi|123992343|gb|EAY31711.1| tyrosyl-tRNA synthetase [Microscilla marina ATCC 23134]
          Length = 450

 Score =  445 bits (1146), Expect = e-123,   Method: Composition-based stats.
 Identities = 141/437 (32%), Positives = 229/437 (52%), Gaps = 27/437 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           +   K +F+  L  RG +H      E     ++ +   YIG+D TA S+H G+L  LM+L
Sbjct: 9   LTKMKKNFIEELRWRGMLHDAMPGTE--EQLNKEMTVGYIGFDPTADSIHIGNLATLMML 66

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             LQ  GHKP++L+GG T ++GDPS +   R ++  + ++ N   I    + F+ +  G+
Sbjct: 67  KHLQMAGHKPVALVGGATGMVGDPSGKSAERNLLDVKTLRHNEAAIGKQLAKFLDFDCGE 126

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
             A +LNN  W   + +++ LR++G   ++N M + +SV+ RL+    LSF EF+Y +LQ
Sbjct: 127 NSAELLNNYDWFGQMNFLEFLRDVGKHLTINYMTAKDSVKKRLES--GLSFTEFSYQLLQ 184

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
            YDF  L KN +C++QMGGSDQWGNI  G +L  R+     FA+T PL+T   G+K GK+
Sbjct: 185 GYDFFWLNKNKNCKIQMGGSDQWGNITTGTELIRRMGGGNAFAVTCPLITKTDGSKFGKS 244

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
           + G +WL+ + TSPY F+Q+W N+DD++     +  T L    I++       +    K+
Sbjct: 245 VGGNVWLDPKRTSPYKFYQFWLNVDDSETSKLLRVFTLLDQETIEKHEADYANDPRMLKR 304

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDEV 346
           I+A E+T MVH +EE ++A  A+   F  S                 + +P  + +K E 
Sbjct: 305 ILAEEVTRMVHSQEELDRAQKASGLLFGKSTLEDFETTDEATLLDVFEGIPKKNYTKAEF 364

Query: 347 SRGMGLLTLIV------KAGFATSTNEARRHLKSNAIKINNSIIS-NEKLQIKLQDFDST 399
                 + LI       +A    S +E RR +K+N IKIN   ++ ++            
Sbjct: 365 DAFDSTVDLIASAMTEDEAKPV-SKSEVRRLIKNNGIKINQKAVTKDQGESKPEFGLLKD 423

Query: 400 GNIKLSFGKKNHIICHL 416
             + +  GKK + +  +
Sbjct: 424 KFLLIKKGKK-YFLVTV 439


>gi|323341676|ref|ZP_08081909.1| tyrosine--tRNA ligase [Erysipelothrix rhusiopathiae ATCC 19414]
 gi|322464101|gb|EFY09294.1| tyrosine--tRNA ligase [Erysipelothrix rhusiopathiae ATCC 19414]
          Length = 420

 Score =  445 bits (1146), Expect = e-123,   Method: Composition-based stats.
 Identities = 141/418 (33%), Positives = 225/418 (53%), Gaps = 15/418 (3%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           K +FL  L+ RG +  ++N   L+    +  +T Y G+D TA SLH GHL QL+LL   Q
Sbjct: 4   KMNFLEELNWRGLVKDVTNYEALEKRL-EQPITLYCGFDPTADSLHVGHLQQLILLKRYQ 62

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GHKPI+L+GG T +IGDP      R M+   ++Q+N++ I       +   +      
Sbjct: 63  MQGHKPIALVGGATGMIGDPRP-TTERSMLNDADLQKNVDGIGAQIERIL--SSDNNPVT 119

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           ++NN  WL  +  +D LR+ G FFSV+ ML+ +++  RL     +SF EF+Y ILQ+ DF
Sbjct: 120 IVNNRDWLGGLTVLDFLRDYGKFFSVSNMLAKDTIAKRLS--TGISFTEFSYTILQSIDF 177

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLS 242
           + L KNY   LQ+GGSDQWGN++ G DL  +++ P  ++F +TS L+  + GTK GK+  
Sbjct: 178 LHLYKNYGIELQIGGSDQWGNLVSGADLIRKVEGPEAEVFGITSHLIMKSDGTKFGKSEG 237

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKK 300
             IWL++  T  Y+F+Q++ N  D DV+ F KRL+   + EI  +    ++   +  A+K
Sbjct: 238 QNIWLDENRTDAYSFYQFFINTSDDDVIDFLKRLSFKSVEEIQAIEASFIKEPHLRLAQK 297

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI-----SISKDEVSRGMGLLTL 355
            +A E+T +V G+E    A       F  ++    +  I       +  EVS    ++ L
Sbjct: 298 ELAKELTEVVFGKEGFAMAERVTNALFSGNVQELTVEQIRQVFADSASIEVSADENIVEL 357

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
           +V      S  EAR+ ++  AI++N  ++++    I   +        +  GKK + I
Sbjct: 358 LVNTKVCPSKREARQLIEGGAIRVNGEVVNDTDFVISKDNAIGKEVTVIRRGKKTYHI 415


>gi|312147778|gb|ADQ30437.1| tyrosyl-tRNA synthetase [Borrelia burgdorferi JD1]
          Length = 405

 Score =  445 bits (1146), Expect = e-123,   Method: Composition-based stats.
 Identities = 154/406 (37%), Positives = 237/406 (58%), Gaps = 7/406 (1%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           LS+L +R F+ Q ++ + L  L  +  +  Y G D T+SSLH GHL   + +  L++ GH
Sbjct: 5   LSLLHKRRFLKQCTSLKVLSDLMDREKIVFYAGVDATSSSLHIGHLIPFLAMMHLRQHGH 64

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
            PI L+G  T+ IGDPS + E R+++ S+EI  N   IK       K+    T    ++N
Sbjct: 65  MPIVLIGDSTAKIGDPSGKSEMRKILSSEEIGNNALLIKNQLQRITKF----TSECFIHN 120

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL ++ YI+ LR++G  FSVNRMLSFE+ + R+  +  LSF+EFNY +LQ+YD+  L 
Sbjct: 121 SNWLDNLNYIEFLRDVGMHFSVNRMLSFETYKRRM--DFGLSFIEFNYQLLQSYDYYMLN 178

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
           K  +CRLQ+GG DQWGNII G+DL  +    + F LT PL+T + G KMGK+  GA++L+
Sbjct: 179 KIKNCRLQIGGDDQWGNIISGVDLIRKKNGSETFGLTFPLITRSDGKKMGKSEKGAVYLD 238

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITT 308
             + S Y+F+QY+RN  D+DV +F    T L   EI+ ++  +G  +N+AK+I+A EIT 
Sbjct: 239 SNLFSIYDFYQYFRNTSDSDVKTFLYLFTFLEEDEIELISNFKGNSLNKAKEILAFEITK 298

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
           +VHG  EA K   A+   F  S    ++P    S   +   + L+ L++ +    S +E 
Sbjct: 299 IVHGEAEALKVQEASFAAFRGSGDRSNIPFFKFSFSSLKEEILLVDLMLDSKIVPSKSEG 358

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           RR + S  + IN   + ++   +  +DF +   ++L  GKK  +  
Sbjct: 359 RRLIDSGGVYINGKRVESQSHLLTKKDF-NNNEVELRVGKKKFLRI 403


>gi|90415201|ref|ZP_01223135.1| tyrosyl-tRNA synthetase [marine gamma proteobacterium HTCC2207]
 gi|90332524|gb|EAS47694.1| tyrosyl-tRNA synthetase [marine gamma proteobacterium HTCC2207]
          Length = 455

 Score =  445 bits (1146), Expect = e-123,   Method: Composition-based stats.
 Identities = 153/434 (35%), Positives = 225/434 (51%), Gaps = 21/434 (4%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M    S+ ++ L +RG + Q+S   EL+    Q     Y G+D TA SLH GHL  L++L
Sbjct: 22  MKQSGSEIINQLRQRGLVAQVSADNELEEHLDQ-PRALYCGFDPTADSLHLGHLVPLLVL 80

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH PI+L+GG T +IGDPSF+   R++     I    +KIKG  S FI +  G 
Sbjct: 81  KRFQEAGHTPIALVGGATGMIGDPSFKAAERKLNTPDVISSWADKIKGQVSQFIDFDCGA 140

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMIL 179
             A++ NN  W   +  ++ LR++G  FSVN M++ ESV+ RL RE   +SF EF+Y +L
Sbjct: 141 NSAVVANNLDWTEKMSALEFLRDVGKHFSVNNMINKESVKLRLDREGSGISFTEFSYALL 200

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK 239
           Q  DF EL + ++C LQ+GGSDQWGNI+ GIDL  R    + FALT PL+T + GTK GK
Sbjct: 201 QGMDFAELNRRHNCTLQVGGSDQWGNIVGGIDLARRQNKSQCFALTVPLITKSDGTKFGK 260

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE--INE 297
           T +GA+WL+   TSP  F+Q+W N+ DADV  F +  T L + EI  + +   K     +
Sbjct: 261 TEAGAVWLDPSKTSPLAFYQFWLNVADADVYKFLRYFTFLSLEEISAVEEADNKAEGKPQ 320

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS-----------QHMPTISISKDEV 346
            + ++A E T +VHG +    A       F    +              MP+  +   E+
Sbjct: 321 GQAVLAREATRLVHGEDGLAAALRITEALFTGDPNQLPESDFEQLCLDGMPSSELPVAEL 380

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEK-----LQIKLQDFDSTGN 401
           +    L +L++  G A    E +  L   ++ IN   I  E+           +      
Sbjct: 381 AD-KPLTSLLMDCGMAKVGREVKDALGRQSVFINGRAIGAEQNMKAAELFDSSNALFGRF 439

Query: 402 IKLSFGKKNHIICH 415
             +  GKK + +  
Sbjct: 440 FLVRLGKKKYHLLQ 453


>gi|290891415|ref|ZP_06554475.1| hypothetical protein AWRIB429_1865 [Oenococcus oeni AWRIB429]
 gi|290478927|gb|EFD87591.1| hypothetical protein AWRIB429_1865 [Oenococcus oeni AWRIB429]
          Length = 417

 Score =  445 bits (1145), Expect = e-123,   Method: Composition-based stats.
 Identities = 150/425 (35%), Positives = 219/425 (51%), Gaps = 25/425 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D +  L  RG I Q ++   L  L     ++ Y+G D TA S+H G+L  L +L   Q  
Sbjct: 2   DIIEDLKWRGSIKQTTDESGLANLLKHKKISLYVGVDPTAKSIHIGNLIPLTILKRFQNA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+P+ ++GGGT +IGDPS +   R+++      EN+ +I    +       GK    ++
Sbjct: 62  GHRPVIVVGGGTGMIGDPSGKASERKLLPKDVFDENVSRITKQMTRLF----GKDGFEIV 117

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  +  I  LR+ G  FS+N ML  + V SRL+    +SF EF Y ILQA DF  
Sbjct: 118 NNYDWLSKLDLISFLRDYGKLFSINVMLKRDVVASRLQA--GISFTEFTYQILQAIDFYT 175

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSGA 244
           L K    +LQ+GG+DQ+GNI  G++L  +L  P  + F LT PLL  + GTK GK+  GA
Sbjct: 176 LFKEKAVQLQVGGADQYGNISSGVELIHKLVGPDTEAFGLTVPLLLKSDGTKFGKSAGGA 235

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKII 302
           IWL+ E  SPY F+Q++ N  DADVV   K  T L   EI+ +A       E  EA++ +
Sbjct: 236 IWLDPEFLSPYEFYQFFYNQTDADVVKLLKIFTFLNREEIEELADKVKNEPEKREAQRRL 295

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGL 352
           A E+T  VHG+   E+A   +   F+  + +            +PTI ++     +   +
Sbjct: 296 AEEVTKFVHGQTAVEEAEKISRILFNGDVENLTASQVAVAFSGVPTIEVA----DQKTDV 351

Query: 353 LTLIVKAG-FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           + L+VK      S  +AR  LK+ AI IN   ISN    I   +      I +  GKK +
Sbjct: 352 VELLVKDKVIEKSRRQAREDLKNGAITINGEKISNVNGVIDPTEKFDGRFIIIRRGKKKY 411

Query: 412 IICHL 416
            +  +
Sbjct: 412 FLAKV 416


>gi|212697022|ref|ZP_03305150.1| hypothetical protein ANHYDRO_01587 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212675992|gb|EEB35599.1| hypothetical protein ANHYDRO_01587 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 439

 Score =  445 bits (1144), Expect = e-123,   Method: Composition-based stats.
 Identities = 164/424 (38%), Positives = 249/424 (58%), Gaps = 21/424 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L +RG+    ++  EL        +T Y G+D TA SL  GHL Q+M++  +Q  G
Sbjct: 12  VFDELKDRGYFEAATDEEELAEKLKNEKLTFYCGFDATADSLTVGHLIQIMVMMRMQNYG 71

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD----A 123
           H+PI+L+GGGT++IGDPS R + R +M  + I  N       F  F+++     D    A
Sbjct: 72  HRPIALLGGGTTMIGDPSGRSDMRMVMTKERIDHNANCFYKQFQRFLEFENDGEDSGDKA 131

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           +M+NN  WL ++ ++D LR++GS F VN ML  ++ ++R+  E+ L+F EF+YM+LQ+YD
Sbjct: 132 IMVNNGDWLLNLPFVDFLRDVGSNFLVNEMLKKDAYKNRM--EKGLTFFEFSYMLLQSYD 189

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+EL + ++C L++GGSDQW NII G DL  + +  K++ +T  LLTTA G KMGK+  G
Sbjct: 190 FLELFRRHNCTLEIGGSDQWSNIIGGYDLIRKKEDEKVYGMTFKLLTTADGVKMGKSQKG 249

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK-LQGKEINEAKKII 302
           A+WL+++ TS Y  +QY RN+DD DV  F   LT LP  E  R+      KEIN AK+++
Sbjct: 250 AVWLDEKKTSAYELFQYMRNVDDRDVEKFLLMLTFLPTDECRRLGNGKDAKEINHAKEVL 309

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFA 362
           A EIT ++HG ++A++A  A+   F  +     MPT  I K+E+   MG+LTL+ K G  
Sbjct: 310 AYEITKLIHGEDKAKEALEASKALFSGAGDESAMPTTEIEKEEL--PMGILTLLTKLGLT 367

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK--------NHIIC 414
            S ++AR  +K   + +N+  I++ + +I  + F     I     KK        N II 
Sbjct: 368 KSNSQARDSVKGGGVSVNDEKITDPRFEINEELFKDGKIIV----KKVKNLPQGYNKIIF 423

Query: 415 HLCG 418
            + G
Sbjct: 424 KIAG 427


>gi|254517420|ref|ZP_05129477.1| tyrosyl-tRNA synthetase [gamma proteobacterium NOR5-3]
 gi|219674258|gb|EED30627.1| tyrosyl-tRNA synthetase [gamma proteobacterium NOR5-3]
          Length = 434

 Score =  444 bits (1142), Expect = e-122,   Method: Composition-based stats.
 Identities = 149/430 (34%), Positives = 227/430 (52%), Gaps = 17/430 (3%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M    S  L+ L +R    QI+   +L    + G  + Y G+D TA SLH G L  L++L
Sbjct: 1   MINMTSALLAELQQRELTFQIAGEDKLPEWLNGGSRSLYCGFDPTADSLHIGSLVPLLML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GH+PI+L+GG T +IGDPSF+ + R++   + ++  +EK++G  S F+ +  G 
Sbjct: 61  RRFQLAGHRPIALVGGATGLIGDPSFKAQERQLNTPEVVESWVEKLRGQVSRFVDFDAGA 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMIL 179
             A+++NN  W   +  +  LR+IG  FS+N M+  ESV+ R++RE   +SF EF YMIL
Sbjct: 121 QSAVVVNNLEWTRDLDVLTFLRDIGKHFSINTMIQKESVKQRIEREGSGISFTEFTYMIL 180

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK 239
           Q+YDF EL K YDC LQ+GGSDQWGNI  GIDL  R+   +++ LT PL+T + G+K GK
Sbjct: 181 QSYDFAELYKRYDCGLQLGGSDQWGNITGGIDLTRRMHGGQVYGLTMPLITKSDGSKFGK 240

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE--INE 297
           T SG IWL+   TSPY+F+Q+W ++ D+D   F +  T L +++I  + +   +     E
Sbjct: 241 TESGTIWLDAARTSPYSFYQFWLSVADSDAYRFLRYFTFLEVADIAEIERADAERSGRPE 300

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSR--- 348
           A++I+A E+T +VHG      A       F         P +       +    +     
Sbjct: 301 AQRILAEEVTRLVHGDAGLAAAKRITESLFSGEPEGLSEPDLEQLMLDGLPSSLLPDRGL 360

Query: 349 GMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEK-----LQIKLQDFDSTGNIK 403
              L  L+  AG A S  + +  L+ +A+ IN S +                        
Sbjct: 361 PETLTQLLADAGLAASGKQIKDALQRDAVIINGSALGMADNGAVSAVFAADKALYGRFYL 420

Query: 404 LSFGKKNHII 413
           +  GKK + +
Sbjct: 421 VRLGKKKYHL 430


>gi|116491773|ref|YP_811317.1| tyrosyl-tRNA synthetase [Oenococcus oeni PSU-1]
 gi|122276045|sp|Q04D20|SYY_OENOB RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|116092498|gb|ABJ57652.1| tyrosyl-tRNA synthetase [Oenococcus oeni PSU-1]
          Length = 417

 Score =  444 bits (1142), Expect = e-122,   Method: Composition-based stats.
 Identities = 150/425 (35%), Positives = 219/425 (51%), Gaps = 25/425 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D +  L  RG I Q ++   L  L     ++ Y+G D TA S+H G+L  L +L   Q  
Sbjct: 2   DIIEDLKWRGSIKQTTDESGLANLLKHKKISLYVGVDPTAKSIHIGNLIPLTILKRFQNA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+P+ ++GGGT +IGDPS +   R+++      EN+ +I    +       GK    ++
Sbjct: 62  GHRPVIVVGGGTGMIGDPSGKASERKLLPKDVFDENVSRITKQMTRLF----GKDGFEIV 117

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  +  I  LR+ G  FS+N ML  + V SRL+    +SF EF Y ILQA DF  
Sbjct: 118 NNYDWLSKLDLISFLRDYGKLFSINVMLKRDVVASRLQA--GISFTEFTYQILQAIDFYT 175

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSGA 244
           L K    +LQ+GG+DQ+GNI  G++L  +L  P  + F LT PLL  + GTK GK+  GA
Sbjct: 176 LFKEKAVQLQVGGADQYGNISSGVELIHKLVGPDTEAFGLTVPLLLKSDGTKFGKSAGGA 235

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKII 302
           IWL+ E  SPY F+Q++ N  DADVV   K  T L   EI+ +A       E  EA++ +
Sbjct: 236 IWLDPEFLSPYEFYQFFYNQTDADVVKLLKIFTFLNREEIEELADKVKNEPEKREAQRRL 295

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGL 352
           A E+T  VHG+   E+A   +   F+  + +            +PTI ++     +   +
Sbjct: 296 AEEVTKFVHGQTAVEEAGKISRILFNGDVENLTASQVAVAFSGVPTIEVA----DQKTDV 351

Query: 353 LTLIVKAG-FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           + L+VK      S  +AR  LK+ AI IN   ISN    I   +      I +  GKK +
Sbjct: 352 VELLVKDKVIEKSRRQAREDLKNGAITINGEKISNVNGVIDPTEKFDGRFIIIRRGKKKY 411

Query: 412 IICHL 416
            +  +
Sbjct: 412 FLAKV 416


>gi|257893804|ref|ZP_05673457.1| tyrosyl-tRNA synthetase [Enterococcus faecium 1,231,408]
 gi|257830183|gb|EEV56790.1| tyrosyl-tRNA synthetase [Enterococcus faecium 1,231,408]
          Length = 407

 Score =  443 bits (1141), Expect = e-122,   Method: Composition-based stats.
 Identities = 147/415 (35%), Positives = 215/415 (51%), Gaps = 23/415 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L+ R  I+Q +N   L  L  +  ++ Y G D T  S+H GHL   M++   Q  
Sbjct: 2   NIIDELTWRDAINQQTNEERLRELVEEKSISLYCGVDPTGDSMHIGHLIPFMMMKRFQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P  L+GGGT  IGDPS R   R +   +++Q N++ +        K      +   +
Sbjct: 62  GHHPYILIGGGTGTIGDPSGRKTERVLQTMEQVQHNVDALSNQMR---KLFGKDANITFV 118

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  I  ++ LR+ G  F++N ML+ + V SRL  E  +SF EF Y ILQ+ DF+ 
Sbjct: 119 NNYDWLSKISLLEFLRDYGKNFNINTMLAKDIVASRL--EVGISFTEFTYQILQSIDFLH 176

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSGA 244
           L K YD +LQ+GG+DQWGNI  G+DL  +L+ P  + F LT PL+  A GTK GKT  GA
Sbjct: 177 LHKTYDVQLQIGGADQWGNITAGLDLIRKLEGPEAEAFGLTIPLMLKADGTKFGKTAGGA 236

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKII 302
           IWL+ + TSP+ F+Q+W N DD DVV + K  T L   EI+ +AK      E  EA++ +
Sbjct: 237 IWLDPKKTSPFEFYQFWLNQDDRDVVKYLKFFTFLSQEEIEELAKKVETEPEKREAQRRL 296

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQH----------MPTISISKDEVSRGMGL 352
           A E+T  VH  E+ ++A       F  +I   +          MP + IS    S    +
Sbjct: 297 AEEVTRFVHSEEDLKEAQKITQALFSGNIKELNAEEIAQGFGKMPNVEIS----STPENI 352

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFG 407
           + L+V      S  +AR  + + AI IN   +++    I   D      + +  G
Sbjct: 353 VELLVSTKIEPSKRQAREDVSNGAISINGDRVTDLNFVINPSDEFDGKFVVIRKG 407


>gi|315226871|ref|ZP_07868659.1| tyrosine--tRNA ligase [Parascardovia denticolens DSM 10105]
 gi|315121003|gb|EFT84135.1| tyrosine--tRNA ligase [Parascardovia denticolens DSM 10105]
          Length = 471

 Score =  443 bits (1139), Expect = e-122,   Method: Composition-based stats.
 Identities = 141/427 (33%), Positives = 221/427 (51%), Gaps = 21/427 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  +  RG ++Q ++   L    +   +T Y G+D TA+SLH G+L QL+L+  LQ+ G
Sbjct: 46  VLDEIEWRGLVNQSTDRERLAAALNGDPITFYAGFDPTAASLHIGNLVQLLLMRHLQEAG 105

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H PI+++GG T +IGDP    E R +     + +  +++K     F+  G G      +N
Sbjct: 106 HHPIAVIGGATGLIGDPRQSGE-RVLNPKDVVSQWSQRLKAQVDRFLDAG-GGNPVRFVN 163

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W  S+  ID LR++G  F +  ML+ + V  RL  E+ +SF EF+Y +LQ  D++ L
Sbjct: 164 NLDWTESMSVIDFLRDVGKNFRLGTMLAKDVVARRLDSEEGISFTEFSYQVLQGNDYLHL 223

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
              Y   LQ GG+DQWGN+  G+DL  +++   +  +T+P++T + G K GK+  GAIWL
Sbjct: 224 FDEYGVTLQTGGADQWGNLTSGLDLIRKVRGTAVNVMTTPIITDSQGKKFGKSEGGAIWL 283

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIATE 305
           +  M SPY  +Q+W N  D  VV   K  T LP  EI R+A          EA+K++A E
Sbjct: 284 DPTMLSPYRLYQFWFNQPDDQVVKLLKYFTFLPKEEIKRLASQVETNPGAREAQKVLAWE 343

Query: 306 ITTMVHGREEAEKAATAAMECFDMS----------IHSQHMPTISISKDEVSR------- 348
           +T+ VHG E A+ A  AA   F                  +  I ++ D+  R       
Sbjct: 344 VTSFVHGDEAAQAAIDAAAALFGRGDVTLESIDEQTLESALDGIKVADDKGQRVFAPAQV 403

Query: 349 GMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGK 408
           G  ++   VKAG   S +EAR+ + S  + +NN  +++   ++K +DF       +  GK
Sbjct: 404 GERVMEASVKAGLFKSLSEARKAITSGGLYLNNQRVTDINQELKEEDFLHHRFALIRRGK 463

Query: 409 KNHIICH 415
           +   +  
Sbjct: 464 RTLGVVE 470


>gi|107103655|ref|ZP_01367573.1| hypothetical protein PaerPA_01004725 [Pseudomonas aeruginosa PACS2]
          Length = 412

 Score =  443 bits (1139), Expect = e-122,   Method: Composition-based stats.
 Identities = 174/416 (41%), Positives = 256/416 (61%), Gaps = 8/416 (1%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           +P  + D +++L ERGF+HQ ++   L    + G  TAY+G+D TA SLH GHL  LML+
Sbjct: 3   VPTHQQDLIALLEERGFVHQCTDRDGLAAHLAAGPATAYLGFDATADSLHVGHLQGLMLM 62

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            WLQK GH+P+ L+GG T+ IGDPSFRD SR ++   +IQ NI+ I  +FS +++     
Sbjct: 63  RWLQKAGHRPLLLIGGATTRIGDPSFRDSSRPILTEAQIQANIDGIARVFSRYVELHDD- 121

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               ++NN  WL  + Y++ L  +G  FS+NR+L+F+++R RL RE SLSFLEF Y +LQ
Sbjct: 122 ---SLVNNAEWLDGVGYLEFLDRVGRHFSINRLLTFDAIRQRLDREHSLSFLEFGYTLLQ 178

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVEL++   C LQ+GG+DQW NII G++L  R    +LF LT PLL T+ G KMGK+
Sbjct: 179 AYDFVELSRRRGCTLQLGGADQWANIINGVELSRRQGGAQLFGLTMPLLATSDGRKMGKS 238

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
             GA+WLN E  +P++FWQ+WRN DD DV  F    + LPM E+ R+  LQG E+NEAK 
Sbjct: 239 AQGAVWLNAERLAPFDFWQFWRNCDDRDVGRFLALFSELPMDEVRRLGALQGAELNEAKV 298

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           ++A   T + HG   A  AA AA   F        +P + +S+  +++G+ L  L+++  
Sbjct: 299 VLANAATALAHGEHAARSAADAARGVFADGTRDSGLPVMKLSRARLAQGLSLTDLLLEHA 358

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
              S +  RR      ++++ + +S+    +  +       ++LS GKK H+   L
Sbjct: 359 IQPSRSAVRRLAAGGGLRLDGTPVSDPDAPLAGE----VDGLRLSLGKKQHLQLRL 410


>gi|261210042|ref|ZP_05924340.1| tyrosyl-tRNA synthetase [Vibrio sp. RC341]
 gi|260840807|gb|EEX67349.1| tyrosyl-tRNA synthetase [Vibrio sp. RC341]
          Length = 426

 Score =  443 bits (1139), Expect = e-122,   Method: Composition-based stats.
 Identities = 154/421 (36%), Positives = 223/421 (52%), Gaps = 13/421 (3%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L +RG I Q +    L    +   V  Y G+D TA SLH GHL  L++L   Q  G
Sbjct: 6   LFDDLQQRGLIAQSTPLEALVERFATSQV-LYCGFDPTAGSLHIGHLVPLLMLKRFQNAG 64

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM-L 126
           H+ I+L+GG T +IGDPSF+   R +  +Q +Q+ +  +    +  +   +    +LM +
Sbjct: 65  HQAIALIGGATGMIGDPSFKANERVLNSAQTVQQWVSDLSQQITQLMASQSENCASLMTV 124

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDFV 185
           NN  W+  I  ID  R++G  FSVN M++ ESV+ RL R +Q +SF EF+Y +LQ+YDF 
Sbjct: 125 NNADWIGKINLIDFFRDVGKHFSVNAMINRESVKQRLARPDQGISFTEFSYSLLQSYDFA 184

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L + + C LQ+GG+DQWGNI+ GIDL  RL   ++  LT PL+T + GTK GKT SGA+
Sbjct: 185 HLNREFGCALQIGGNDQWGNIVSGIDLTRRLNGTEVGGLTLPLITKSDGTKFGKTESGAV 244

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIA 303
           WL    TSPY F+Q+W N DDADV  F    T L  +EI+  R A        +A++I+A
Sbjct: 245 WLESSKTSPYRFYQFWLNSDDADVYRFLAYYTFLSTAEIEDIRQADALRTGKPQAQQILA 304

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRGMGLLTLIV 357
            ++T  VHG E    A       F   +    +  +       +     SR   LL L++
Sbjct: 305 EQVTRFVHGEEGLAAAQRITQALFSGDVSYLTLSELRQLELDGLPCVAASRSDTLLDLLL 364

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            +G A+S  +AR  L++ AI++N   +  E   +            L  GKK   +  L 
Sbjct: 365 TSGLASSKRQAREWLENGAIRVNGERVQQEG--VLSGFALFDRYYVLQRGKKQFALIKLE 422

Query: 418 G 418
           G
Sbjct: 423 G 423


>gi|87121327|ref|ZP_01077217.1| tyrosyl-tRNA synthetase [Marinomonas sp. MED121]
 gi|86163484|gb|EAQ64759.1| tyrosyl-tRNA synthetase [Marinomonas sp. MED121]
          Length = 435

 Score =  442 bits (1138), Expect = e-122,   Method: Composition-based stats.
 Identities = 152/432 (35%), Positives = 224/432 (51%), Gaps = 20/432 (4%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M    +D L  L  RG I Q +   EL    ++   T Y G+D TA SLH G L  L++L
Sbjct: 1   MTIGSNDLLKDLQNRGLIAQTTAEAELANHLNEASRTLYCGFDPTADSLHIGSLVPLLML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GHKP++L+GG T +IGDPSF+   R++   + + E + K+K   S FI++    
Sbjct: 61  KRFQQAGHKPLALVGGATGLIGDPSFKAAERKLNGPEVVNEWVSKLKVQVSQFIEFNDSA 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMIL 179
             A ++NN  W   +  +D LR++G  FS+N M+  ESV+ R+ RE + +SF EF YMIL
Sbjct: 121 NSAEVVNNYDWTKDLNILDFLRDVGKHFSINAMIQKESVKQRINREGEGISFTEFTYMIL 180

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK 239
           Q++DF EL +   C LQ+GGSDQWGNI  G +L  R     +F LT PL+T + GTK GK
Sbjct: 181 QSFDFAELNRLNGCSLQIGGSDQWGNITGGTELTRRQNGNHVFGLTMPLVTKSDGTKFGK 240

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NE 297
           T SG IWL+ + TS Y F+Q+W N  DAD   F K  T L + EID + K   +     +
Sbjct: 241 TESGTIWLDAKKTSQYAFFQFWLNTADADAYKFLKYFTFLSVEEIDAIEKADQEAQGRPQ 300

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS-----------QHMPTISISKDEV 346
           A+ I+A E+T +VHG E    A       F                   +P+       +
Sbjct: 301 AQAILAKEVTKLVHGEEGLAAAERITQALFSGEAADLSEQDLAQIQLDGLPSTEFELSSL 360

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS-----TGN 401
           +  M L +   +AG AT+  + +  L+ N++ +N      +   +  + F +        
Sbjct: 361 TD-MPLTSFFTEAGLATNGKQVKDALQRNSVFVNGEAKGMQDNMLATEIFAAENGYYNKY 419

Query: 402 IKLSFGKKNHII 413
             +  GKK H +
Sbjct: 420 FLVKLGKKKHHL 431


>gi|218889577|ref|YP_002438441.1| tyrosyl-tRNA synthetase [Pseudomonas aeruginosa LESB58]
 gi|254237022|ref|ZP_04930345.1| tyrosyl-tRNA synthetase [Pseudomonas aeruginosa C3719]
 gi|254242823|ref|ZP_04936145.1| tyrosyl-tRNA synthetase [Pseudomonas aeruginosa 2192]
 gi|254783625|sp|B7V6L2|SYY_PSEA8 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|126168953|gb|EAZ54464.1| tyrosyl-tRNA synthetase [Pseudomonas aeruginosa C3719]
 gi|126196201|gb|EAZ60264.1| tyrosyl-tRNA synthetase [Pseudomonas aeruginosa 2192]
 gi|218769800|emb|CAW25560.1| tyrosyl-tRNA synthetase [Pseudomonas aeruginosa LESB58]
          Length = 412

 Score =  442 bits (1138), Expect = e-122,   Method: Composition-based stats.
 Identities = 174/416 (41%), Positives = 256/416 (61%), Gaps = 8/416 (1%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           +P  + D +++L ERGF+HQ ++   L    + G  TAY+G+D TA SLH GHL  LML+
Sbjct: 3   VPTHQQDLIALLEERGFVHQCTDRDGLAAHLAAGPATAYLGFDATADSLHVGHLQGLMLM 62

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            WLQK GH+P+ L+GG T+ IGDPSFRD SR ++   +IQ NI+ I  +FS +++     
Sbjct: 63  RWLQKAGHRPLLLIGGATTRIGDPSFRDSSRPILTEAQIQANIDGIARVFSRYVELHDD- 121

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               ++NN  WL  + Y++ L  +G  FS+NR+L+F+++R RL RE SLSFLEF Y +LQ
Sbjct: 122 ---SLVNNAEWLDGVGYLEFLDRVGRHFSINRLLTFDAIRQRLDREHSLSFLEFGYTLLQ 178

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVEL++   C LQ+GG+DQW NII G++L  R    +LF LT PLL T+ G KMGK+
Sbjct: 179 AYDFVELSRRRGCTLQLGGADQWANIINGVELSRRQGGAQLFGLTMPLLATSDGRKMGKS 238

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
             GA+WLN E  +P++FWQ+WRN DD DV  F    + LPM E+ R+  LQG E+NEAK 
Sbjct: 239 AQGAVWLNAERLAPFDFWQFWRNCDDRDVGRFLALFSELPMDEVRRLGALQGAELNEAKV 298

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           ++A   T + HG   A  AA AA   F        +P + +S+  +++G+ L  L+++  
Sbjct: 299 VLANAATALAHGEHAARSAADAARGVFADGTRDSGLPVMKLSRARLAQGLSLTDLLLEHA 358

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
              S +  RR      ++++ + +S+    +  +       ++LS GKK H+   L
Sbjct: 359 IQPSRSAVRRLAAGGGLRLDGTPVSDPDAPLAGE----VDGLRLSLGKKQHLHLRL 410


>gi|203287819|ref|YP_002222834.1| tyrosyl-tRNA synthetase [Borrelia recurrentis A1]
 gi|254783574|sp|B5RRH9|SYY_BORRA RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|201085039|gb|ACH94613.1| tyrosyl-tRNA synthetase [Borrelia recurrentis A1]
          Length = 406

 Score =  442 bits (1137), Expect = e-122,   Method: Composition-based stats.
 Identities = 171/408 (41%), Positives = 251/408 (61%), Gaps = 6/408 (1%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L +L +RGF+ Q +N  EL  L  +  +  Y+G D T++SLH GHL   M++  LQ+ GH
Sbjct: 5   LKVLDKRGFLKQCTNLEELSTLMDREKIVFYVGVDATSASLHIGHLIPFMVMLHLQRQGH 64

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
            PI L+GGGT+ IGDPS +D  R+++  ++I EN++ I       I    G     +LNN
Sbjct: 65  IPIILIGGGTTKIGDPSGKDSMRKILLKEDIDENVKTISSQLLKIIDLSNGG---YILNN 121

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL  I YI+ LRE+G +FSVNRMLSFE+ + RLK    LSF+EFNY +LQ+YDF  L+
Sbjct: 122 AEWLDGINYIEFLREVGIYFSVNRMLSFETYKRRLK--DGLSFIEFNYQLLQSYDFYMLS 179

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
           +  +C+LQ+GG DQWGNI+ G+DL  R    K+F LT PL+T + G KMGK+  GA++L+
Sbjct: 180 RMKNCKLQIGGDDQWGNIVSGVDLVNRKSGNKVFGLTLPLITRSDGNKMGKSEKGAVYLD 239

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITT 308
            E+ S Y+F+QY+RNI D DV  F    T L   EI+R+A ++G+ +N AK+I+A EIT 
Sbjct: 240 SELYSVYDFYQYFRNIPDLDVKKFLYLFTFLEEEEIERIASVKGQLLNNAKEILAFEITK 299

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
           +VHG++EA KA++AA   F        +P   +    +   + L+ L+V A   +S +EA
Sbjct: 300 IVHGKDEALKASSAAKAAFKGGDGRADIPFFKLELTNLEESILLVDLMVLAKVVSSKSEA 359

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           RR + S  + I+   + ++   +   +F   G I+L  GKK  +   L
Sbjct: 360 RRLIDSGGVYIDKVRVGDQNYCLCKDNFI-NGEIELKIGKKKILRIVL 406


>gi|262091744|gb|ACY25333.1| tyrosyl-tRNA synthetase [uncultured actinobacterium]
          Length = 425

 Score =  442 bits (1137), Expect = e-122,   Method: Composition-based stats.
 Identities = 145/421 (34%), Positives = 228/421 (54%), Gaps = 10/421 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D +   + RG IH  ++  +L    +   ++AY+G+D T+ SLH G+L   + L   Q  
Sbjct: 6   DVVLEFASRGLIHDSTDRADLTKRSTTSQMSAYVGFDPTSDSLHVGNLLGQISLRRFQML 65

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+P+ L GG T ++GDPS R E R ++ +  +  N+  IKG     + + +G   A+++
Sbjct: 66  GHRPVVLAGGATGMVGDPSGRSEERNLLDADSLAHNVSCIKGQLERILDFDSGANKAVLV 125

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           +N TW   +  +D LR++G + +VN+M++ +SV+SR+     LSF EF+YM+LQA DF  
Sbjct: 126 DNATWTKDVPVLDFLRDVGKYITVNQMMAKDSVKSRISDGNGLSFTEFSYMLLQANDFRH 185

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L ++ DC +QMGGSDQWGNI  GIDL  +      F LT PL+T + GTK GKT  GA+W
Sbjct: 186 LCEHLDCEMQMGGSDQWGNITAGIDLIRKRLGRDSFGLTWPLVTKSDGTKFGKTADGAVW 245

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIAT 304
           L+ + TSPY F Q+W  + D D+     + +  PM EI  +   Q    E   A++ +A 
Sbjct: 246 LDAKRTSPYQFRQFWMQVTDIDIERMLPQFSLRPMEEIASILNEQRLSPEKRVAQRTLAN 305

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGM-------GLLTLIV 357
           EIT+M+HG E A  A  AA   F  +       T+ +   EV+            + ++V
Sbjct: 306 EITSMLHGEESANAAEQAADVLFGANPVFASEATLKLIAQEVAVTQMGTAVLHDAVGVLV 365

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
             G A+S +EARR L+  +++ N   + +E  ++          + L  GK  + +    
Sbjct: 366 TTGLASSNSEARRLLQQRSVRANGEQL-DEHAKLDKVALLHGRWMLLRKGKTAYHLLDFA 424

Query: 418 G 418
           G
Sbjct: 425 G 425


>gi|119502753|ref|ZP_01624838.1| Tyrosine--tRNA ligase [marine gamma proteobacterium HTCC2080]
 gi|119461099|gb|EAW42189.1| Tyrosine--tRNA ligase [marine gamma proteobacterium HTCC2080]
          Length = 441

 Score =  442 bits (1137), Expect = e-122,   Method: Composition-based stats.
 Identities = 151/430 (35%), Positives = 224/430 (52%), Gaps = 22/430 (5%)

Query: 3   AFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
           A  S  LS L  RG I QI+    L         T Y G+D TA SLH G L  L++L  
Sbjct: 11  AMSSALLSDLRARGLIFQIAGEDTLAEWLDAEPRTLYCGFDPTADSLHIGSLVPLLMLRR 70

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD 122
            Q  GH+P++L+GG T +IGDPSF+   R +     +   + K++   S FI + +GK  
Sbjct: 71  FQLAGHRPLALVGGATGLIGDPSFKAAERNLNTPDVVANWVSKLQKQVSQFIDF-SGKNS 129

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQA 181
           A ++NN  W   +  +  LR++G +FS+N M+  ESV+ R++RE   +SF EF YMILQ+
Sbjct: 130 AKVVNNLDWTAGMDVLTFLRDVGKYFSINNMIQKESVKQRIEREGSGISFTEFTYMILQS 189

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
           YDF EL + + C LQ+GGSDQWGNI  GIDL  RL   + F LT PL+  A GTK GKT 
Sbjct: 190 YDFSELYRQHQCGLQIGGSDQWGNITGGIDLTRRLHGGQAFGLTMPLVEKADGTKFGKTE 249

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAK 299
           SG IWL+   TSPY+F+Q+W N  D DV  F +  T L + +I  +       +   + +
Sbjct: 250 SGTIWLDAHKTSPYSFYQFWLNTSDTDVYKFLRYFTFLSVEDIAAIEAADATREGRPQGQ 309

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHS-----------QHMPTISISKDEVSR 348
           +I+A E+T +VHG E    A       F    ++             +PT +++ + ++ 
Sbjct: 310 QILADEVTKLVHGEEGLAAAQRITQALFVGEAYTLGPDDLEQLALDGLPTTALNAESLAP 369

Query: 349 GMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIIS-----NEKLQIKLQDFDSTGNIK 403
              L  L+   G  TS  + +  LK+ A+ IN   +      +  +  +  +        
Sbjct: 370 --TLTQLLCDVGMVTSGKQVKDALKNKAVFINGVPVDGAPPIDTAVCFQSDNALHGQYWI 427

Query: 404 LSFGKKNHII 413
           +  GKK + +
Sbjct: 428 VRLGKKKYHL 437


>gi|116052172|ref|YP_788984.1| tyrosyl-tRNA synthetase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|122261320|sp|Q02SV2|SYY_PSEAB RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|115587393|gb|ABJ13408.1| tyrosyl-tRNA synthetase [Pseudomonas aeruginosa UCBPP-PA14]
          Length = 412

 Score =  442 bits (1137), Expect = e-122,   Method: Composition-based stats.
 Identities = 174/416 (41%), Positives = 256/416 (61%), Gaps = 8/416 (1%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           +P  + D +++L ERGF+HQ ++   L    + G  TAY+G+D TA SLH GHL  LML+
Sbjct: 3   VPTHQQDLIALLEERGFVHQCTDRDGLAAHLAAGPATAYLGFDATADSLHIGHLQGLMLM 62

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            WLQK GH+P+ L+GG T+ IGDPSFRD SR ++   +IQ NI+ I  +FS +++     
Sbjct: 63  RWLQKAGHRPLLLIGGATTRIGDPSFRDSSRPILTEAQIQANIDGIARVFSRYVELHDD- 121

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               ++NN  WL  + Y++ L  +G  FS+NR+L+F+++R RL RE SLSFLEF Y +LQ
Sbjct: 122 ---SLVNNAEWLDGVGYLEFLDRVGRHFSINRLLTFDAIRQRLDREHSLSFLEFGYTLLQ 178

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVEL++   C LQ+GG+DQW NII G++L  R    +LF LT PLL T+ G KMGK+
Sbjct: 179 AYDFVELSRRRGCTLQLGGADQWANIINGVELSRRQGGAQLFGLTMPLLATSDGRKMGKS 238

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
             GA+WLN E  +P++FWQ+WRN DD DV  F    + LPM E+ R+  LQG E+NEAK 
Sbjct: 239 AQGAVWLNAERLAPFDFWQFWRNCDDRDVGRFLALFSELPMDEVRRLGALQGAELNEAKV 298

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           ++A   T + HG   A  AA AA   F        +P + +S+  +++G+ L  L+++  
Sbjct: 299 VLANAATALAHGEHAARSAADAARGVFADGTRDSGLPMMKLSRARLAQGLSLTDLLLEHA 358

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
              S +  RR      ++++ + +S+    +  +       ++LS GKK H+   L
Sbjct: 359 IQPSRSAVRRLAAGGGLRLDGTPVSDPDAPLAGE----VDGLRLSLGKKQHLQLRL 410


>gi|294787543|ref|ZP_06752796.1| tyrosine--tRNA ligase [Parascardovia denticolens F0305]
 gi|294484899|gb|EFG32534.1| tyrosine--tRNA ligase [Parascardovia denticolens F0305]
          Length = 440

 Score =  442 bits (1137), Expect = e-122,   Method: Composition-based stats.
 Identities = 141/427 (33%), Positives = 221/427 (51%), Gaps = 21/427 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  +  RG ++Q ++   L    +   +T Y G+D TA+SLH G+L QL+L+  LQ+ G
Sbjct: 15  VLDEIEWRGLVNQSTDRERLAAALNGDPITFYAGFDPTAASLHIGNLVQLLLMRHLQEAG 74

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H PI+++GG T +IGDP    E R +     + +  +++K     F+  G G      +N
Sbjct: 75  HHPIAVIGGATGLIGDPRQSGE-RVLNPKDVVSQWSQRLKAQVDRFLDAG-GGNPVRFVN 132

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W  S+  ID LR++G  F +  ML+ + V  RL  E+ +SF EF+Y +LQ  D++ L
Sbjct: 133 NLDWTESMSVIDFLRDVGKNFRLGTMLAKDVVARRLDSEEGISFTEFSYQVLQGNDYLHL 192

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
              Y   LQ GG+DQWGN+  G+DL  +++   +  +T+P++T + G K GK+  GAIWL
Sbjct: 193 FDEYGVTLQTGGADQWGNLTSGLDLIRKVRGTAVNVMTTPIITDSQGKKFGKSEGGAIWL 252

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIATE 305
           +  M SPY  +Q+W N  D  VV   K  T LP  EI R+A          EA+K++A E
Sbjct: 253 DPTMLSPYRLYQFWFNQPDDQVVKLLKYFTFLPKEEIKRLASQVETNPGAREAQKVLAWE 312

Query: 306 ITTMVHGREEAEKAATAAMECFDMS----------IHSQHMPTISISKDEVSR------- 348
           +T+ VHG E A+ A  AA   F                  +  I ++ D+  R       
Sbjct: 313 VTSFVHGDEAAQAAIDAAAALFGRGDVTLESIDEQTLESALDGIKVADDKGQRVFAPAQV 372

Query: 349 GMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGK 408
           G  ++   VKAG   S +EAR+ + S  + +NN  +++   ++K +DF       +  GK
Sbjct: 373 GERVMEASVKAGLFKSLSEARKAITSGGLYLNNQRVTDINQELKEEDFLHHRFALIRRGK 432

Query: 409 KNHIICH 415
           +   +  
Sbjct: 433 RTLGVVE 439


>gi|296387304|ref|ZP_06876803.1| tyrosyl-tRNA synthetase [Pseudomonas aeruginosa PAb1]
          Length = 412

 Score =  442 bits (1137), Expect = e-122,   Method: Composition-based stats.
 Identities = 174/416 (41%), Positives = 256/416 (61%), Gaps = 8/416 (1%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           +P  + D +++L ERGF+HQ ++   L    + G  TAY+G+D TA SLH GHL  LML+
Sbjct: 3   VPTHQQDLIALLEERGFLHQCTDRDGLAAHLAAGPATAYLGFDATADSLHVGHLQGLMLM 62

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            WLQK GH+P+ L+GG T+ IGDPSFRD SR ++   +IQ NI+ I  +FS +++     
Sbjct: 63  RWLQKAGHRPLLLIGGATTRIGDPSFRDSSRPILTEAQIQANIDGIARVFSRYVELHDD- 121

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               ++NN  WL  + Y++ L  +G  FS+NR+L+F+++R RL RE SLSFLEF Y +LQ
Sbjct: 122 ---SLVNNAEWLDGVGYLEFLDRVGRHFSINRLLTFDAIRQRLDREHSLSFLEFGYTLLQ 178

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVEL++   C LQ+GG+DQW NII G++L  R    +LF LT PLL T+ G KMGK+
Sbjct: 179 AYDFVELSRRRGCTLQLGGADQWANIINGVELSRRQGGAQLFGLTMPLLATSDGRKMGKS 238

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
             GA+WLN E  +P++FWQ+WRN DD DV  F    + LPM E+ R+  LQG E+NEAK 
Sbjct: 239 AQGAVWLNAERLAPFDFWQFWRNCDDRDVGRFLALFSELPMDEVRRLGALQGAELNEAKV 298

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           ++A   T + HG   A  AA AA   F        +P + +S+  +++G+ L  L+++  
Sbjct: 299 VLANAATALAHGEHAARSAADAARGVFADGTRDSGLPVMKLSRARLAQGLSLTDLLLEHA 358

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
              S +  RR      ++++ + +S+    +  +       ++LS GKK H+   L
Sbjct: 359 IQPSRSAVRRLAAGGGLRLDGTPVSDPDAPLAGE----VDGLRLSLGKKQHLQLRL 410


>gi|203284283|ref|YP_002222023.1| tyrosyl-tRNA synthetase [Borrelia duttonii Ly]
 gi|254783572|sp|B5RLQ9|SYY_BORDL RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|201083726|gb|ACH93317.1| tyrosyl-tRNA synthetase [Borrelia duttonii Ly]
          Length = 406

 Score =  442 bits (1137), Expect = e-122,   Method: Composition-based stats.
 Identities = 171/408 (41%), Positives = 251/408 (61%), Gaps = 6/408 (1%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L +L +RGF+ Q +N  EL  L  +  +  Y+G D T++SLH GHL   M++  LQ+ GH
Sbjct: 5   LKVLDKRGFLKQCTNLEELSTLMDREKIVFYVGVDATSASLHIGHLIPFMVMLHLQRQGH 64

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
            PI L+GGGT+ IGDPS +D  R+++  ++I EN++ I       I    G     +LNN
Sbjct: 65  IPIILIGGGTTKIGDPSGKDSMRKILLKEDIDENVKTISSQLLKIIDLSNGG---YILNN 121

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL  I YI+ LRE+G +FSVNRMLSFE+ + RLK    LSF+EFNY +LQ+YDF  L+
Sbjct: 122 AEWLDGINYIEFLREVGIYFSVNRMLSFETYKRRLK--DGLSFIEFNYQLLQSYDFYMLS 179

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
           +  +C+LQ+GG DQWGNI+ G+DL  R    K+F LT PL+T + G KMGK+  GA++L+
Sbjct: 180 RMKNCKLQIGGDDQWGNIVSGVDLVNRKSGNKVFGLTLPLITRSDGKKMGKSEKGAVYLD 239

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITT 308
            E+ S Y+F+QY+RNI D DV  F    T L   EI+R+A ++G+ +N AK+I+A EIT 
Sbjct: 240 SELYSVYDFYQYFRNIPDLDVKKFLYLFTFLEEEEIERIASVKGQLLNNAKEILAFEITK 299

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
           +VHG++EA KA++AA   F        +P   +    +   + L+ L+V A   +S +EA
Sbjct: 300 IVHGKDEALKASSAAKAAFKGGDGRADIPFFKLELTNLEESILLVDLMVLAKVVSSKSEA 359

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           RR + S  + I+   + ++   +   +F   G I+L  GKK  +   L
Sbjct: 360 RRLIDSGGVYIDKVRVGDQNYCLCKDNFI-NGEIELKIGKKKILRIVL 406


>gi|15599333|ref|NP_252827.1| tyrosyl-tRNA synthetase [Pseudomonas aeruginosa PAO1]
 gi|81540032|sp|Q9HWP3|SYY1_PSEAE RecName: Full=Tyrosyl-tRNA synthetase 1; AltName:
           Full=Tyrosine--tRNA ligase 1; Short=TyrRS 1
 gi|9950343|gb|AAG07525.1|AE004830_6 tyrosyl-tRNA synthetase [Pseudomonas aeruginosa PAO1]
          Length = 412

 Score =  441 bits (1136), Expect = e-122,   Method: Composition-based stats.
 Identities = 174/416 (41%), Positives = 256/416 (61%), Gaps = 8/416 (1%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           +P  + D +++L ERGF+HQ ++   L    + G  TAY+G+D TA SLH GHL  LML+
Sbjct: 3   VPTHQQDLIALLEERGFVHQCTDRDGLAAHLAAGPATAYLGFDATADSLHVGHLQGLMLM 62

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            WLQK GH+P+ L+GG T+ IGDPSFRD SR ++   +IQ NI+ I  +FS +++     
Sbjct: 63  RWLQKAGHRPLLLIGGATTRIGDPSFRDSSRPILTEAQIQANIDGIARVFSRYVELHDD- 121

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               ++NN  WL  + Y++ L  +G  FS+NR+L+F+++R RL RE SLSFLEF Y +LQ
Sbjct: 122 ---SLVNNAEWLDGVGYLEFLDRVGRHFSINRLLTFDAIRQRLDREHSLSFLEFGYTLLQ 178

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDFVEL++   C LQ+GG+DQW NII G++L  R    +LF LT PLL T+ G KMGK+
Sbjct: 179 AYDFVELSRRRGCTLQLGGADQWANIINGVELSRRQGGAQLFGLTMPLLATSDGRKMGKS 238

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
             GA+WLN E  +P++FWQ+WRN DD DV  F    + LPM E+ R+  LQG E+NEAK 
Sbjct: 239 AQGAVWLNAERLAPFDFWQFWRNCDDRDVGRFLALFSELPMDEVRRLGALQGAELNEAKV 298

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           ++A   T + HG   A  AA AA   F        +P + +S+  +++G+ L  L+++  
Sbjct: 299 VLANAATALAHGEHAARSAADAARGVFADGTRDSGLPVMKLSRARLAQGLSLTDLLLEHA 358

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
              S +  RR      ++++ + +S+    +  +       ++LS GKK H+   L
Sbjct: 359 IQPSRSAVRRLAAGGGLRLDGTPVSDPDTPLAGE----VDGLRLSLGKKQHLHLRL 410


>gi|329769229|ref|ZP_08260648.1| tyrosyl-tRNA synthetase [Gemella sanguinis M325]
 gi|328839360|gb|EGF88940.1| tyrosyl-tRNA synthetase [Gemella sanguinis M325]
          Length = 417

 Score =  441 bits (1136), Expect = e-122,   Method: Composition-based stats.
 Identities = 136/423 (32%), Positives = 217/423 (51%), Gaps = 22/423 (5%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S  L  L  R  ++Q ++   +  L     V+ Y G D T  SLH GHL   + L    +
Sbjct: 2   SKLLDDLKFRDLVYQQTDEEGIAKLLENESVSIYCGTDPTGDSLHVGHLLPFLTLRRFAQ 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP+ L+GGGT IIGDPS R E R++   + + EN +K++    +  +   G  +   
Sbjct: 62  HGHKPVVLVGGGTGIIGDPSGRSEERQLQSLETVAENAKKLENQLRNIFR---GHDNIEF 118

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  WL  +  I+ LR+ G   +VN +L+ +SV SRL  E  LSF EF+Y +LQ  D+ 
Sbjct: 119 VNNGDWLGKLSMIEFLRDYGKLINVNYLLAKDSVSSRL--ENGLSFTEFSYALLQGIDYA 176

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERL-KTPKLFALTSPLLTTASGTKMGKTLSGA 244
            L ++++ ++Q+GGSDQWGNI  G+++  +L    + +  T PL+  + GTK GK+  GA
Sbjct: 177 HLNEHHNVKIQLGGSDQWGNITTGLEIMRKLRGDVEAYGFTIPLMLKSDGTKFGKSTGGA 236

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKII 302
           +WL+ E T+PY F+Q+W N  D+DV+S  K+ T L   EI+++ +   KE     A+K +
Sbjct: 237 VWLDPEKTTPYEFYQFWFNTADSDVISAIKKFTFLEREEIEKLEESVEKEPHLRLAQKAL 296

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGL 352
           A E+  +VHG +  E A       F  ++            + MP     K E      +
Sbjct: 297 AEELVKIVHGEKALESALNITKALFSGNVKELTHDELQEAVKGMPKSEAEKKEY----NI 352

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           +  +V+     S  +AR  + + AI +N   I++    +  +         L  GKK + 
Sbjct: 353 VDFLVETKLVQSKRQAREDVNNGAIYVNGDRITDLDYVVGAESRLEDAFTVLRRGKKKYQ 412

Query: 413 ICH 415
           +  
Sbjct: 413 LVE 415


>gi|152985019|ref|YP_001346338.1| tyrosyl-tRNA synthetase [Pseudomonas aeruginosa PA7]
 gi|189083667|sp|A6UZV3|SYY_PSEA7 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|150960177|gb|ABR82202.1| tyrosyl-tRNA synthetase [Pseudomonas aeruginosa PA7]
          Length = 412

 Score =  441 bits (1135), Expect = e-122,   Method: Composition-based stats.
 Identities = 177/415 (42%), Positives = 253/415 (60%), Gaps = 8/415 (1%)

Query: 2   PAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
           P  + D +++L ERGF+HQ ++   L    + G VTAY+G+D TA SLH GHL  LML+ 
Sbjct: 4   PTHQQDLIALLEERGFVHQCTDREGLAAHLAAGPVTAYLGFDATADSLHVGHLQGLMLMR 63

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKT 121
           WLQK GH+P+ L+GG T+ IGDPSFRD SR ++   +IQ NI+ I  +FS ++    G  
Sbjct: 64  WLQKAGHRPLLLIGGATTRIGDPSFRDSSRPILGEAQIQANIDGIVRVFSRYVALDEG-- 121

Query: 122 DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA 181
              ++NN  WL  + Y++ L ++G  FS+NR+L+F+++R RL RE SLSFLEF Y +LQA
Sbjct: 122 --SLVNNAEWLDGVGYLEFLDQVGRHFSINRLLTFDAIRQRLDREHSLSFLEFGYTLLQA 179

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
           YDFVEL++   C LQ+GG+DQW NII G++L  R    +LF LT PLL T  G KMGK+ 
Sbjct: 180 YDFVELSRRRGCTLQLGGADQWANIINGVELSRRQGGAQLFGLTMPLLATRDGRKMGKSA 239

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKI 301
            GA+WLN E  +P++FWQ+WRN DD DV  F    + LPM E+ R+  LQG E+NEAK +
Sbjct: 240 QGAVWLNAERLAPFDFWQFWRNCDDRDVARFLALFSELPMDEVRRLGALQGAELNEAKVV 299

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGF 361
           +A   T + HG + A  AA AA   F        +P + IS++ +++G+ L  L+V    
Sbjct: 300 LANAATALAHGADAARAAADAARGVFADGARDAGLPLVRISRERLAQGLSLTELLVDNAL 359

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             S    RR      ++++   +++    +  +         LS GKK H+   L
Sbjct: 360 QASRGAVRRLAAGGGLRLDGMPVADPDAPLTGE--VDGRR--LSLGKKQHLQLRL 410


>gi|237734570|ref|ZP_04565051.1| tyrosyl-tRNA synthetase [Mollicutes bacterium D7]
 gi|229382390|gb|EEO32481.1| tyrosyl-tRNA synthetase [Coprobacillus sp. D7]
          Length = 408

 Score =  441 bits (1134), Expect = e-121,   Method: Composition-based stats.
 Identities = 135/415 (32%), Positives = 210/415 (50%), Gaps = 18/415 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG I  +S+P  L+   + G +T YIG D T  SLH GH +  ++   L++ G
Sbjct: 3   IYDELVWRGLIKDVSSPD-LEEKLNNGGMTFYIGTDPTGDSLHIGHFSSFLISKRLKEAG 61

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H PI L+GG T +IGDP   D  R M+  + ++ N   +K        +        ++N
Sbjct: 62  HNPILLVGGATGLIGDPKP-DTERPMITKETVEHNFACLKKQAQDLFGFE-------VVN 113

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W   + +ID LR+ G +F++N ML+ + V+ RL     +++ EF+YMI+QA DF  L
Sbjct: 114 NYDWSKDLNFIDFLRDYGKYFNINYMLNKDIVKRRLDA--GITYTEFSYMIMQAMDFEWL 171

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
             N +C +Q+ G DQWGNI  GI+L  +    + +  T PLLT + GTK GKT   AIWL
Sbjct: 172 YNNKNCVMQVAGQDQWGNITAGIELIRKKDGKEAYGFTMPLLTKSDGTKFGKTNGKAIWL 231

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKKIIATE 305
           ++E TSPY  +Q++ N +D  V+ + K LT L   EI  + +       + EA + +A E
Sbjct: 232 DREKTSPYEMYQFFINSEDDKVIDYLKFLTFLTPEEIMELEEKNKTQPHLREAHQALARE 291

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS-----ISKDEVSRGMGLLTLIVKAG 360
           + T +HG E  E+A   +   F   I S  +  +      +   EV+  + +L  +   G
Sbjct: 292 VITFLHGAEAYEEAVNISKMLFSGQIQSLTLAQVKVCFEGVPSIEVNEDLNILDALTTCG 351

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            A S  EAR  +   +I IN   I + +  +   +        +  GKKN+ +  
Sbjct: 352 AAKSKREAREFVNGGSILINGERIKDIEFIVTKANAFGNEATVVRRGKKNYFVIK 406


>gi|167756860|ref|ZP_02428987.1| hypothetical protein CLORAM_02409 [Clostridium ramosum DSM 1402]
 gi|167703035|gb|EDS17614.1| hypothetical protein CLORAM_02409 [Clostridium ramosum DSM 1402]
          Length = 408

 Score =  441 bits (1134), Expect = e-121,   Method: Composition-based stats.
 Identities = 135/415 (32%), Positives = 210/415 (50%), Gaps = 18/415 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG I  +S+P  L+   + G +T YIG D T  SLH GH +  ++   L++ G
Sbjct: 3   IYDELVWRGLIKDVSSPD-LEEKLNNGGMTFYIGTDPTGDSLHIGHFSSFLISKRLKEAG 61

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H PI L+GG T +IGDP   D  R M+  + ++ N   +K        +        ++N
Sbjct: 62  HNPILLVGGATGLIGDPKP-DTERPMITKETVEHNFACLKKQAQDLFGFE-------VVN 113

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W   + +ID LR+ G +F++N ML+ + V+ RL     +++ EF+YMI+QA DF  L
Sbjct: 114 NYDWSKDLNFIDFLRDYGKYFNINYMLNKDIVKRRLDA--GITYTEFSYMIMQAMDFEWL 171

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
             N +C +Q+ G DQWGNI  GI+L  +    + +  T PLLT + GTK GKT   AIWL
Sbjct: 172 YNNKNCVMQVAGQDQWGNITAGIELIRKKDGKEAYGFTMPLLTKSDGTKFGKTNGKAIWL 231

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKKIIATE 305
           ++E TSPY  +Q++ N +D  V+ + K LT L   EI  + +       + EA + +A E
Sbjct: 232 DREKTSPYEMYQFFINSEDDKVIDYLKFLTFLTPEEIMELEEKNKTQPHLREAHQALARE 291

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS-----ISKDEVSRGMGLLTLIVKAG 360
           + T +HG E  E+A   +   F   I S  +  +      +   EV+  + +L  +   G
Sbjct: 292 VITFLHGAEAYEEAVNISKMLFSGQIQSLTLAQVKVCFEGVPSIEVNEELNILDALTTCG 351

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            A S  EAR  +   +I IN   I + +  +   +        +  GKKN+ +  
Sbjct: 352 AAKSKREAREFVNGGSILINGERIKDVEFIVTKANAFGNEATVVRRGKKNYFVIK 406


>gi|330814306|ref|YP_004358545.1| tyrosyl-tRNA synthetase cluster 1 [Candidatus Pelagibacter sp.
           IMCC9063]
 gi|327487401|gb|AEA81806.1| tyrosyl-tRNA synthetase cluster 1 [Candidatus Pelagibacter sp.
           IMCC9063]
          Length = 412

 Score =  441 bits (1134), Expect = e-121,   Method: Composition-based stats.
 Identities = 181/409 (44%), Positives = 273/409 (66%), Gaps = 2/409 (0%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L+    RG+  Q +N   L+ L     ++ YIG+D TASSLH G L Q+M L   QK G
Sbjct: 5   LLTEFKNRGYFFQCTNENYLEKLLESKKISFYIGFDCTASSLHVGSLIQIMCLRLFQKFG 64

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKPI L+GGGT+++GDPS ++ESR+++  ++I++NI++IKGIFS F+         + +N
Sbjct: 65  HKPIVLLGGGTTMVGDPSGKEESRKILTEEQIEKNIQQIKGIFSKFLDR-ENMEKVVYVN 123

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N+ WL  + YID LR  G  F++NRML+F+SV++RL+REQSLSFLEFNYMILQAYD++EL
Sbjct: 124 NKKWLTKLNYIDFLRTYGKHFTLNRMLTFDSVKTRLEREQSLSFLEFNYMILQAYDYLEL 183

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            KN DC LQ+GGSDQWGNI+ G+DL  +    +   LT+PL+TTA G KMGKT  GA+WL
Sbjct: 184 FKNNDCLLQIGGSDQWGNIVNGVDLIRKEIQGEAMGLTTPLITTAQGKKMGKTEDGAVWL 243

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           N+++ S Y++WQ+WRN DD DV+ +    T L +  I    +  G ++N  K ++A E T
Sbjct: 244 NEDLVSTYDYWQFWRNTDDRDVIRYLYLFTELEVETIKSYEQYTGNQLNGLKILLANEAT 303

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
           T++HG++ A++A   +   F+     + +P+  I K E+ +G+ L  ++++  F++S  +
Sbjct: 304 TLLHGKKAAQEAEETSRSTFEERSTGKDLPSKKIKKSEIEKGIALKDVLLEIQFSSSGGD 363

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            +R++ + A +INN I +NE+ +I L D      IK+SFGKK H + ++
Sbjct: 364 FKRNMVNGAYRINNIIETNEEKKITLTDVV-NKQIKISFGKKKHFVINV 411


>gi|325848870|ref|ZP_08170380.1| tyrosine--tRNA ligase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
 gi|325480514|gb|EGC83576.1| tyrosine--tRNA ligase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
          Length = 421

 Score =  440 bits (1133), Expect = e-121,   Method: Composition-based stats.
 Identities = 159/396 (40%), Positives = 243/396 (61%), Gaps = 9/396 (2%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L +RG+    ++  EL        +T Y G+D TA SL  GHL Q+M++  +Q  G
Sbjct: 12  VFDELKDRGYFEAATDEEELAEKLKNEKLTFYCGFDATADSLTVGHLIQIMVMMRMQNYG 71

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD----A 123
           H+PI+L+GGGT++IGDPS R + R +M  + I  N +     F  F+++     D    A
Sbjct: 72  HRPIALLGGGTTMIGDPSGRSDMRMVMTKERIDHNADCFYKQFQRFLEFENDGEDSGDKA 131

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           +M+NN  WL ++ ++D LR++GS F VN ML  ++ ++R+  E+ L+F EF+YM+LQ+YD
Sbjct: 132 IMVNNGDWLLNLPFVDFLRDVGSNFLVNEMLKKDAYKNRM--EKGLTFFEFSYMLLQSYD 189

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+EL + ++C L++GGSDQW NII G DL  + +  K++ +T  LLTTA G KMGK+  G
Sbjct: 190 FLELFRRHNCTLEIGGSDQWSNIIGGYDLIRKKEDEKVYGMTFKLLTTADGVKMGKSQKG 249

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK-LQGKEINEAKKII 302
           A+WL+++ TS Y  +QY RN+DD DV  F   LT LP  E  R+      KEIN AK+++
Sbjct: 250 AVWLDEKKTSAYELFQYMRNVDDRDVEKFLLMLTFLPTDECRRLGNGKDAKEINHAKEVL 309

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFA 362
           A EIT ++HG E+A++A  A+   F  +     MPT  I K+E+   MG+LTL+ K G  
Sbjct: 310 AYEITKLIHGEEKAKEALEASKALFSGAGDESAMPTTEIEKEEL--PMGILTLLTKLGLT 367

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
            S ++AR  +K   + IN+  I++ + +I  + F+ 
Sbjct: 368 KSNSQARDSVKGGGVSINDEKITDPRFEINEELFED 403


>gi|77361329|ref|YP_340904.1| tyrosyl-tRNA synthetase [Pseudoalteromonas haloplanktis TAC125]
 gi|97201824|sp|Q3II62|SYY1_PSEHT RecName: Full=Tyrosyl-tRNA synthetase 1; AltName:
           Full=Tyrosine--tRNA ligase 1; Short=TyrRS 1
 gi|76876240|emb|CAI87462.1| tyrosine tRNA synthetase [Pseudoalteromonas haloplanktis TAC125]
          Length = 420

 Score =  440 bits (1133), Expect = e-121,   Method: Composition-based stats.
 Identities = 149/422 (35%), Positives = 235/422 (55%), Gaps = 14/422 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +  L  ++ RG + Q+S+  +L+ L +   V  Y G+D TA SLH GHL  L++L     
Sbjct: 3   TQLLEDITHRGLVSQVSDLAQLEQLLATSQV-VYCGFDPTAGSLHIGHLVPLLMLKRFND 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHK ++L+GG T +IGDPSF+   R +   + +Q  +  +     S +     +    +
Sbjct: 62  AGHKAVALIGGATGLIGDPSFKATERSLNSKETVQGWVADLSSQVESVMNPHLSEP-IQL 120

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDF 184
            NN  W   I+ +D  R++G  FS+N M++ ESV+ RL+R +Q LSF EF+Y +LQ+YDF
Sbjct: 121 KNNADWFSGIEVLDFFRDVGKHFSINNMINRESVKQRLQRPDQGLSFTEFSYTLLQSYDF 180

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
            +L     C +Q+GG+DQWGNI+ GIDL  RL    ++ LT PL+T + GTK GKT  GA
Sbjct: 181 AKLNSELGCSVQIGGNDQWGNIVSGIDLTRRLNKQTVYGLTLPLITKSDGTKFGKTEGGA 240

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKII 302
           IWL+ + TSPY F+Q+W N DDADV +F +  T L + EI+ +    +  ++  +A+ I+
Sbjct: 241 IWLDPKKTSPYRFYQFWLNCDDADVYNFLRFYTFLSVKEIEAIEANDITSQQKPQAQGIL 300

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS-ISKDEVS------RGMGLLTL 355
           A ++T  VHG +    A       F+  + +  +  +  + +D ++        + +  L
Sbjct: 301 AEQLTRFVHGEQGLASAQRITQLLFNGQVQTLTLAELEQLEQDGLAVHAISDAKINIAEL 360

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +VK+  A+S   AR  + +NAIKIN   I++E  Q+    FD      +  GKK   +  
Sbjct: 361 LVKSELASSKRTARELINANAIKINGEAITDEHAQLDFPLFD--RFWVMQRGKKQFRLIK 418

Query: 416 LC 417
           L 
Sbjct: 419 LA 420


>gi|308271963|emb|CBX28571.1| Tyrosyl-tRNA synthetase [uncultured Desulfobacterium sp.]
          Length = 436

 Score =  440 bits (1132), Expect = e-121,   Method: Composition-based stats.
 Identities = 177/420 (42%), Positives = 244/420 (58%), Gaps = 21/420 (5%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +D ++I  ERGFI + ++  EL        +T YIG+D TASSLH G L  +M L  +QK
Sbjct: 9   ADLINIFEERGFIEKTTHDEELKDYIRNNKITCYIGFDPTASSLHVGSLIPIMALAHMQK 68

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+PI+L+GGGT +IGDPS + E R+++  + I+ N+  IK   S FI +   K  AL+
Sbjct: 69  NGHRPIALIGGGTGLIGDPSGKTEMRKLLNPEMIEANLSGIKKQLSRFIDFSDNK--ALL 126

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  WL  +KYI  LR+IG  FSVNRM+  ES + RL  E+ L+F+EFNYM+LQAYDF+
Sbjct: 127 VNNNEWLSELKYIPFLRDIGKCFSVNRMIKAESYKLRLDSEEGLNFIEFNYMLLQAYDFL 186

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           EL   Y CRLQMGGSDQWGNI+ GI+L  ++K    F +T PL+ T++G KMGKT  GA+
Sbjct: 187 ELFDKYKCRLQMGGSDQWGNIVAGIELIRKVKKDISFGITFPLIKTSNGAKMGKTAKGAV 246

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
           WL+ + TSPY+++QYW N DD DV  F    T LP+ EI  + KL+G ++N AK ++A E
Sbjct: 247 WLDSDRTSPYDYYQYWINTDDRDVARFLALFTFLPIEEIKDIEKLEGADLNSAKTVLAFE 306

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQH------------------MPTISISKDEVS 347
            T + HGR+EA KA  AA   F      +                   +P   I++D + 
Sbjct: 307 TTLLAHGRDEAVKAYQAAASVFGERFVPEDYLMHSTVPRNSSKAEDISVPCSYINQDVLK 366

Query: 348 RGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFG 407
            G+    L  +A    S   ARR ++     +N+  I      I   D      I L  G
Sbjct: 367 LGIPAFKLFHEAKLTVSGAAARRLIEQGGAYVNDRRIEMFDEMITSNDIMHM-EILLRSG 425


>gi|169350220|ref|ZP_02867158.1| hypothetical protein CLOSPI_00964 [Clostridium spiroforme DSM 1552]
 gi|169293003|gb|EDS75136.1| hypothetical protein CLOSPI_00964 [Clostridium spiroforme DSM 1552]
          Length = 408

 Score =  440 bits (1131), Expect = e-121,   Method: Composition-based stats.
 Identities = 136/415 (32%), Positives = 213/415 (51%), Gaps = 18/415 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG I  +S+P  L+   + G +T YIG D T  SLH GH +  ++   L+  G
Sbjct: 3   IYDELVWRGLIKDVSSPD-LEEKLNNGGMTFYIGTDPTGDSLHIGHFSSFLISKRLKDAG 61

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H PI L+GG T +IGDP   D  R M+  + ++ N   +K        +        ++N
Sbjct: 62  HNPILLVGGATGLIGDPKP-DTERPMITKETVEHNFNCLKKQAQDIFGFE-------VVN 113

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W   + +ID LR+ G +F+VN ML+ + V+ RL     +++ EF+YMI+QA DF  L
Sbjct: 114 NFDWSKDLNFIDFLRDYGKYFNVNYMLNKDIVKRRLDA--GITYTEFSYMIMQAMDFEWL 171

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
             N +C +Q+ G DQWGNI  GI+L  +    + +  T PLLT + GTK GKT   AIWL
Sbjct: 172 YNNKNCVMQVAGQDQWGNITAGIELIRKKDGKEAYGFTMPLLTKSDGTKFGKTNGKAIWL 231

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKKIIATE 305
           +KE TSPY  +Q++ N +D  V+ + K LT L   EI  + +       + EA + +A E
Sbjct: 232 DKEKTSPYEMYQFFINSEDEKVIDYLKFLTFLTPEEIMELEEKNKTQPHLREAHQALARE 291

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS-----ISKDEVSRGMGLLTLIVKAG 360
           + T +HG+E  E+A   +   F   I S  +  +      ++  +V+  + +L  ++  G
Sbjct: 292 VITFLHGKEAYEEAQNISKMLFSGQIQSLTLDQVKVCFEGVASVDVNEDLNILDALITCG 351

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            A S  EAR  +   ++ IN   I +    +K ++        +  GKKN+ +  
Sbjct: 352 GAKSKREAREFVNGGSVLINGERIKDVDFVVKKENAFGNEATVIRRGKKNYFVIK 406


>gi|309799396|ref|ZP_07693636.1| tyrosyl-tRNA synthetase [Streptococcus infantis SK1302]
 gi|308116984|gb|EFO54420.1| tyrosyl-tRNA synthetase [Streptococcus infantis SK1302]
          Length = 371

 Score =  439 bits (1130), Expect = e-121,   Method: Composition-based stats.
 Identities = 141/370 (38%), Positives = 208/370 (56%), Gaps = 17/370 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L ERG I Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  G
Sbjct: 3   IFDELKERGLIFQTTDEEALRKALEEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKP +L+GG T +IGDPSF+D  R +     ++  ++ I+G  S F+ +  G+  A+M+N
Sbjct: 63  HKPYALVGGATGLIGDPSFKDAERSLQTKDTVEGWVKSIQGQLSRFLDFENGENKAVMVN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W  SI +ID LR++G +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF  L
Sbjct: 123 NYDWFGSISFIDFLRDVGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDFYVL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            + ++  LQ+GGSDQWGN+  G +L  R        +T PL+T A+G K GK+   A+WL
Sbjct: 181 NQEHNVTLQIGGSDQWGNMTAGTELLRRKADKTGHVITVPLITDATGKKFGKSEGNAVWL 240

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATE 305
           N E TSPY  +Q+W N+ DAD V F K  T L + EI+ + K      +E  A+K++A E
Sbjct: 241 NPEKTSPYEMYQFWMNVMDADAVRFLKIFTFLSLDEIEDIRKRFEAAPHERLAQKVLARE 300

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTL 355
           + T+VHG E  ++A     + F  +I +          + +P   +  DE      ++ L
Sbjct: 301 VVTLVHGEEAYKEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVQADE---NHNIVEL 357

Query: 356 IVKAGFATST 365
           +V +G   S 
Sbjct: 358 LVSSGVVNSK 367


>gi|189184678|ref|YP_001938463.1| tyrosyl-tRNA synthetase [Orientia tsutsugamushi str. Ikeda]
 gi|254783621|sp|B3CV32|SYY_ORITI RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|189181449|dbj|BAG41229.1| tyrosyl-tRNA synthetase [Orientia tsutsugamushi str. Ikeda]
          Length = 413

 Score =  439 bits (1130), Expect = e-121,   Method: Composition-based stats.
 Identities = 190/411 (46%), Positives = 273/411 (66%), Gaps = 2/411 (0%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           F++    RG+ +Q ++   L  + +   + AYIG+D TA SLH G+L Q+M+L  LQ+ G
Sbjct: 3   FINEFINRGYFYQSTDLTRLTQISNSSQIVAYIGFDCTAQSLHVGNLMQIMILRLLQQCG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HK I ++GG T+ IGDPS +D+ RR++ + EIQ+NI  IK     FIK+   K D L+LN
Sbjct: 63  HKSIVVIGGATTKIGDPSEKDKLRRIITNDEIQQNISGIKRSLKKFIKFDETKNDVLLLN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N+ WL SI YI+ LR+ G  FSVN+ML+  SV+SRL+R   LSFLEFNYM+LQAYDF  L
Sbjct: 123 NQEWLDSINYINFLRDYGRAFSVNKMLTMNSVKSRLERHTPLSFLEFNYMLLQAYDFYYL 182

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            K Y+C LQ+GGSDQWGNI  G+DL ++L   ++F LT+PL+T +SG KMGKT  GA+WL
Sbjct: 183 NKYYNCNLQIGGSDQWGNITMGVDLVKKLSNNEVFGLTTPLITNSSGEKMGKTADGAVWL 242

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           N++M SPYN++QYWRNI+D DV+ FAK        E+ ++ +L    +NEAKK IA +IT
Sbjct: 243 NEDMCSPYNYFQYWRNIEDNDVIRFAKLYGEFSEVELSKLTELFFNNVNEAKKQIAYKIT 302

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISK-DEVSRGMGLLTLIVKAGFATSTN 366
            + HGR+EA KA   A++ F+     +++PT +I   + +  G+ +  L+V  G A + +
Sbjct: 303 LLCHGRDEANKALNTAIQMFEHKKADENLPTFTIKDCNNLKVGIPITELLVTIGLAKTKS 362

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           E +R ++ N I+INN  ++N  L ++L DF     I +S GKK HI+  + 
Sbjct: 363 EGKRLIQGNGIRINNIKVNNINLVVQLHDFI-DQVITVSLGKKCHILVKIA 412


>gi|256545791|ref|ZP_05473147.1| tyrosine--tRNA ligase [Anaerococcus vaginalis ATCC 51170]
 gi|256398487|gb|EEU12108.1| tyrosine--tRNA ligase [Anaerococcus vaginalis ATCC 51170]
          Length = 437

 Score =  439 bits (1129), Expect = e-121,   Method: Composition-based stats.
 Identities = 158/397 (39%), Positives = 243/397 (61%), Gaps = 9/397 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L +RG+    ++  EL        +T Y G+D TA SL  GHL Q+M++  +Q  
Sbjct: 27  NVFDELKDRGYFEAATDEEELAEKLKNEKLTFYCGFDATADSLTVGHLIQIMVMMRMQNY 86

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG----TGKTD 122
           GH+PI+L+GGGT++IGDPS R + R +M  ++I  N       F  F+++          
Sbjct: 87  GHRPIALLGGGTTMIGDPSGRSDMRMVMTKEKINHNANCFYKQFQRFLEFENEGEDSGDK 146

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
           A++ NN  WL ++ +ID LR++GS F VN ML  ++ ++R+  ++ L+F EF+YM+LQ+Y
Sbjct: 147 AIIENNANWLLNLPFIDFLRDVGSNFLVNEMLKKDAYKNRM--DKGLTFFEFSYMLLQSY 204

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DF+EL + ++C L++GGSDQW NII G DL  + +  K++ +T  LLTTA G KMGK+  
Sbjct: 205 DFLELYRRHNCTLEIGGSDQWSNIIGGYDLIRKKEDAKVYGMTFKLLTTADGVKMGKSQK 264

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK-LQGKEINEAKKI 301
           GA+WL++E TS Y  +QY RN+DD DV  F   LT LP +E  ++ K    KEIN AK++
Sbjct: 265 GAVWLDEEKTSAYELFQYMRNVDDRDVEKFLLMLTFLPTAECRKLGKGKDAKEINHAKEV 324

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGF 361
           +A EIT ++HG E+A++A  A+   F  +     MPT  I K+E+   MG+LTL+ K G 
Sbjct: 325 LAYEITKLIHGEEKAKEALEASKALFSGAGDESAMPTTEIEKEEL--PMGILTLLTKLGL 382

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
             S ++AR  +K   + IN+  I++ + +I    F+ 
Sbjct: 383 TKSNSQARDSVKGGGVSINDEKITDPRFEINEDLFED 419


>gi|145343694|ref|XP_001416448.1| Tyrosyl-tRNA synthetase, probable [Ostreococcus lucimarinus
           CCE9901]
 gi|144576673|gb|ABO94741.1| Tyrosyl-tRNA synthetase, probable [Ostreococcus lucimarinus
           CCE9901]
          Length = 484

 Score =  439 bits (1129), Expect = e-121,   Method: Composition-based stats.
 Identities = 137/428 (32%), Positives = 224/428 (52%), Gaps = 19/428 (4%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           ++S     L  RG +   +N      +     +  Y G+D TA SLH G+L  +++L W 
Sbjct: 62  YESSVYGELHARGLVEACTNE----SVLEGSSLRVYCGFDPTADSLHIGNLLGIVVLSWF 117

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           +K GH P++L+GG T  +GDPS +   R ++    I  N E I       +   +  T  
Sbjct: 118 EKYGHTPVALIGGATGRVGDPSGKSSERPILDETTIAVNAEAISNTIQKILTDNSTDTSL 177

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           +++NN  W   + ++D LR++G +  +  ML+ +SV+SRL  E  +SF EF Y +LQ YD
Sbjct: 178 IVVNNVDWYADMSFLDFLRDVGKYSRLGTMLAKDSVKSRLSSESGISFTEFAYQLLQGYD 237

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASGTKMGKTLS 242
           FV L ++    +Q+GGSDQWGNI  G DL  RL+ +  +  LT PLL  + GTK GK+  
Sbjct: 238 FVHLLRSQQVSVQVGGSDQWGNITAGTDLIRRLEPSADVSGLTFPLLLKSDGTKFGKSEQ 297

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAK 299
           GAIWL+    SPY F+QY+ N+DDADV+   K LT +P++E+   +R        +N  +
Sbjct: 298 GAIWLSTSRLSPYKFYQYFLNVDDADVIRLLKMLTFVPLAEVLEYERHMSQPSYIVNTVQ 357

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQH----------MPTISISKDEVSRG 349
           + +A E+T  VHG +  E+A  A       +               +P+ ++   +V  G
Sbjct: 358 RRLAEEVTRFVHGVQGLEEAQAATSVLKPGADTDLDVTALTALEGIVPSATLPMQQV-LG 416

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
           + L+ L V  G   S    +R ++   +++NN  + +++  + + D      + L+ GKK
Sbjct: 417 ISLVQLAVDVGLQPSKGATKRLIQGGGLRLNNIKVLSDEATVSMADIVDGRLLLLAAGKK 476

Query: 410 NHIICHLC 417
           N ++  + 
Sbjct: 477 NKLLISVT 484


>gi|148284088|ref|YP_001248178.1| tyrosyl-tRNA synthetase [Orientia tsutsugamushi str. Boryong]
 gi|189083664|sp|A5CC73|SYY_ORITB RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|146739527|emb|CAM79245.1| tyrosyl-tRNA synthetase [Orientia tsutsugamushi str. Boryong]
          Length = 413

 Score =  438 bits (1128), Expect = e-121,   Method: Composition-based stats.
 Identities = 190/411 (46%), Positives = 275/411 (66%), Gaps = 2/411 (0%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           F++    RG+ +Q ++   L  + +   + AYIG+D TA SLH G+L Q+M+L  LQ+ G
Sbjct: 3   FINEFINRGYFYQSTDLTRLTQISNSSQIVAYIGFDCTAQSLHVGNLMQIMILRLLQQCG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HK I ++GG T+ IGDPS +D+ RR++ + EIQ+NI  IK     FIK+   K D L+LN
Sbjct: 63  HKSIVVIGGATTKIGDPSEKDKLRRIITNDEIQQNISGIKRSLQKFIKFDETKNDVLLLN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N+ WL SI YI+ LR+ G  FSVN+ML+  SV+SRL+R   LSFLEFNYM+LQAYDF  L
Sbjct: 123 NQEWLDSINYINFLRDYGRAFSVNKMLTMNSVKSRLERHTPLSFLEFNYMLLQAYDFYYL 182

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            K Y+C LQ+GGSDQWGNI  G+DL ++L   ++F LT+PL+T +SG KMGKT++GA+WL
Sbjct: 183 NKYYNCNLQIGGSDQWGNITMGVDLVKKLSNNEVFGLTTPLMTNSSGEKMGKTVNGAVWL 242

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           N++M SPYN++QYW NI+D DV+ FAK        E+ ++ +L    +NEAKK IA +IT
Sbjct: 243 NEDMCSPYNYFQYWGNIEDNDVIRFAKLYGEFSEIELSKLTELLFNNVNEAKKQIAYKIT 302

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISK-DEVSRGMGLLTLIVKAGFATSTN 366
            + HGR+EA KA   A++ F+     +++PT +I   + +  G+ +  L+V  G A + +
Sbjct: 303 LLCHGRDEANKALNTAIQMFEHKKADENLPTFTIKDCNNLKVGIPITELLVTIGLAKTKS 362

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           E +R ++ N I+INN  ++N  L ++LQDF     I +S GKK HI+  + 
Sbjct: 363 EGKRLIQGNGIRINNIKVNNINLVVQLQDFI-GQVITVSLGKKCHILVKIA 412


>gi|326427881|gb|EGD73451.1| tyrosyl-tRNA synthetase [Salpingoeca sp. ATCC 50818]
          Length = 459

 Score =  438 bits (1126), Expect = e-120,   Method: Composition-based stats.
 Identities = 142/446 (31%), Positives = 235/446 (52%), Gaps = 37/446 (8%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           +  F+  L ERG +   ++  EL  LC +  +T Y G+D TA +LH G+L  +M L    
Sbjct: 13  RRPFVGTLEERGLLKDSTS-DELRTLCEKEQLTVYCGFDPTARTLHIGNLLAIMGLVHCV 71

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK--------- 115
           + GH  I+L+GG T+ IGDPS R   R  +   E+  NI  I  +    +          
Sbjct: 72  RAGHNVIALVGGATARIGDPSGRSTERTCLPEAELDANIAGITEVLHRILDNAQQYEAST 131

Query: 116 ------------YGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL 163
                                ++NN  W    + ID + +IG  F VN ML+ +SV+SR+
Sbjct: 132 EPTAQKSASATAATGAAPSVKVVNNAEWYDEWRVIDFIADIGRHFRVNSMLAKDSVKSRM 191

Query: 164 KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFA 223
           + ++ +SF EF Y +LQ +DF++L K ++CR+Q+GGSDQWGNI  GIDL  R+    ++ 
Sbjct: 192 EHDEGISFTEFTYQVLQGHDFLQLFKAHNCRVQLGGSDQWGNITAGIDLVRRVTGKSVYG 251

Query: 224 LTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSE 283
           +T PLLTT++G K GK+   A+WL+ ++TSPY  +Q++ N+ DADV  +   LT LP+S 
Sbjct: 252 VTMPLLTTSTGEKFGKSAGNAVWLDAQLTSPYELYQFFINMADADVERYLAALTLLPVST 311

Query: 284 IDRMAKLQGKEINE--AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS-------- 333
           I ++ +   ++ +E  A+  +A+E+  +VHG    ++A TA    F              
Sbjct: 312 IKQVMEQHIQQPHERLAQHKLASEVVRLVHGAAAVDEAKTATDALFAHGSLDNVSAATLK 371

Query: 334 ---QHMPTISISKDEVSRG-MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKL 389
                 P+ ++ +  ++ G   +L+  V+AG  +S  EA+R LK+  + +NN+ +     
Sbjct: 372 AMFATAPSATLDRALITAGTTSILSAAVQAGLFSSKGEAKRTLKAGGLYVNNNRVE-RDA 430

Query: 390 QIKLQDFDSTGNIKLSFGKKNHIICH 415
            +  +   +     L  G+K+++I H
Sbjct: 431 PLTSEHVLADALTVLRKGRKHYLIIH 456


>gi|226226049|ref|YP_002760155.1| tyrosyl-tRNA synthetase [Gemmatimonas aurantiaca T-27]
 gi|226089240|dbj|BAH37685.1| tyrosyl-tRNA synthetase [Gemmatimonas aurantiaca T-27]
          Length = 428

 Score =  437 bits (1125), Expect = e-120,   Method: Composition-based stats.
 Identities = 140/433 (32%), Positives = 214/433 (49%), Gaps = 23/433 (5%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M A +   L  L+ R  I Q +    L    + G V+ Y G+D TASSLH G+L  +M L
Sbjct: 1   MSA-RPSLLDELAWRELISQHT--EGLPAALAAGTVSGYCGFDPTASSLHVGNLIPIMGL 57

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             LQ+ GH+P +L+GG T +IGDPS R   R +     I  N E I+G  S F+ +  G 
Sbjct: 58  MHLQRAGHRPYALVGGATGMIGDPSGRASERVLQGLDAIHSNAEAIRGQLSRFLDF-DGP 116

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
             A ++NN  WL  +  +D LRE G  FSVN ML+ +SV+SR+     +S+ EF+YM+LQ
Sbjct: 117 RGAKLVNNVDWLSKLSVLDFLRETGKHFSVNYMLAKDSVKSRIDG--GISYTEFSYMLLQ 174

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           A+DF EL ++    LQ GGSDQWGNI  G++L  R        LT PL+T A G+K GK+
Sbjct: 175 AHDFWELNRSEGVTLQFGGSDQWGNITAGLELIRRSGGADSNGLTFPLITNADGSKFGKS 234

Query: 241 -LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINE 297
              G++WL+ E TSPY F+Q+W   DD D   + +  T   + E+  +        E   
Sbjct: 235 TGGGSVWLDPERTSPYQFYQFWMGADDRDASRYLRYYTLFSLDEVTALDAEVRTAPEKRA 294

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDM-----------SIHSQHMPTISI---SK 343
           A++ +A E+T+ VH  E A  A   +   F+                  +P       ++
Sbjct: 295 AQRALAVEVTSRVHSAEAARVAQEVSALLFEKADPQALSGEALKALRAEIPFAEYEPPAE 354

Query: 344 DEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
              + G+ +   +   G A S   A+R L+   + +N   +      +         ++ 
Sbjct: 355 GAPAEGIDVYQCLTLLGIAASRGAAKRLLEQGGVSVNGVKLGAADRVVGEDRLLRDRHLL 414

Query: 404 LSFGKKNHIICHL 416
           +  G++   +  +
Sbjct: 415 VRKGQREFGLIQV 427


>gi|153216273|ref|ZP_01950366.1| tyrosyl-tRNA synthetase [Vibrio cholerae 1587]
 gi|124114362|gb|EAY33182.1| tyrosyl-tRNA synthetase [Vibrio cholerae 1587]
          Length = 434

 Score =  437 bits (1125), Expect = e-120,   Method: Composition-based stats.
 Identities = 146/426 (34%), Positives = 218/426 (51%), Gaps = 23/426 (5%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L +RG I Q +    L    +      Y G+D TA SLH GHL  L++L   Q  G
Sbjct: 14  LFDDLQQRGLIAQSTPLEALVERFAT-PQVLYCGFDPTAGSLHIGHLVPLLMLKRFQNAG 72

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM-L 126
           H+ I+L+GG T +IGDPSF+   R +  +Q +Q+ +  +    +  +   +    +LM +
Sbjct: 73  HQAIALIGGATGMIGDPSFKANERVLNSAQTVQQWVSDLSQQITQLMASQSENCASLMTV 132

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDFV 185
           NN  W+  I  ID  R++G  FSVN M++ ESV+ RL R +Q +SF EF+Y +LQ+YDF 
Sbjct: 133 NNADWIGKINLIDFFRDVGKHFSVNAMINRESVKQRLARPDQGISFTEFSYSLLQSYDFA 192

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L + + C LQ+GG+DQWGNI+ GIDL  RL   ++  LT PL+T + GTK GKT SGA+
Sbjct: 193 HLNREFGCTLQIGGNDQWGNIVSGIDLTRRLNGAEVCGLTLPLITKSDGTKFGKTESGAV 252

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIA 303
           WL    TSPY F+Q+W N DDADV  F    T L  +EI+ + +         +A++I+A
Sbjct: 253 WLESSKTSPYRFYQFWLNSDDADVYRFLAYYTFLSTAEIEEIRQADALRAGKPQAQQILA 312

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIH-----------SQHMPTISISKDEVSRGMGL 352
             +T  VHG E    A       F   +               +P ++ S+ +    + L
Sbjct: 313 EHVTRFVHGEEGLAAAQRITQALFSGDVSYLSLSELAQLELDGLPCVAASRTDSLLDLLL 372

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
            + +  +       +AR  L++ AI++N   +  E   +            L  GKK   
Sbjct: 373 SSGLASS-----KRQAREWLENGAIRVNGERVQQEG--VLSGFALFDRYYVLQRGKKKFA 425

Query: 413 ICHLCG 418
           +  L G
Sbjct: 426 LIKLEG 431


>gi|147817232|emb|CAN64191.1| hypothetical protein VITISV_016956 [Vitis vinifera]
          Length = 868

 Score =  436 bits (1123), Expect = e-120,   Method: Composition-based stats.
 Identities = 151/424 (35%), Positives = 230/424 (54%), Gaps = 19/424 (4%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           +P  +S+ + IL +RG +  I++P  L    S   +  Y G+D TA SLH G+L  L++L
Sbjct: 54  IPLHRSNVIEILEQRGLVDSITSP-ILRASSSTQTLKVYCGFDPTAESLHLGNLLGLIVL 112

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT-- 118
            W ++ GHK ++L+GG T+ IGDPS +   R  +  + +++N   I    +S +   T  
Sbjct: 113 SWFRRCGHKAVALIGGATARIGDPSGKSLERPELNLEALEKNTIGITNTITSILNRSTTN 172

Query: 119 -GKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYM 177
            G    ++LNN  W      +D L+++G +  V  M++ ESV+ RL+ EQ +S+ EF Y 
Sbjct: 173 GGDDSFVVLNNYDWWKEFTLLDFLKKVGRYARVGTMMAKESVKKRLESEQGMSYTEFTYQ 232

Query: 178 ILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK-LFALTSPLLTTASGTK 236
           +LQ YDF+ L +N    +Q GGSDQWGNI  G +L  ++      + LT PLL  + GTK
Sbjct: 233 LLQGYDFLYLFENEGVSVQFGGSDQWGNITAGTELIRKILQTDGAYGLTFPLLLKSDGTK 292

Query: 237 MGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE-- 294
            GK+  GAIWL+  M SPY F+QY+ ++ DADVV F K LT L M EI  +         
Sbjct: 293 FGKSEDGAIWLSPAMLSPYKFYQYFFSVPDADVVRFLKILTFLDMDEIMELEVKMRSPSY 352

Query: 295 -INEAKKIIATEITTMVHGREEAEKAATAAMECFDMSI----------HSQHMPTISISK 343
             N A++ +A E T  VHG+E  ++A  A       +            ++ +P+ S+S 
Sbjct: 353 VPNTAQRRLAEEATRFVHGQEGLDEALKATEALRPGAETKLDWKTIEGIAKDVPSCSLSY 412

Query: 344 DEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
           DEV   + LL L +  G   S + ARR LK   + +NN+ I +E  +I+ +D      + 
Sbjct: 413 DEV-LNLSLLDLSISTGLLESKSAARRLLKQGGLYLNNNRIDSEAKRIEAEDIVDGKVLL 471

Query: 404 LSFG 407
           LS G
Sbjct: 472 LSAG 475


>gi|297181878|gb|ADI18056.1| tyrosyl-tRNA synthetase [uncultured actinobacterium HF0200_20K23]
          Length = 422

 Score =  436 bits (1123), Expect = e-120,   Method: Composition-based stats.
 Identities = 149/425 (35%), Positives = 228/425 (53%), Gaps = 20/425 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D LS L  RG IH  ++   L    + G +T Y G+D TA SLH G+L  L+ L   Q  
Sbjct: 2   DILSDLEARGLIHDTTDRDALASRLAAGPITLYCGFDPTADSLHVGNLIGLLTLRRFQMA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH PISL GG T +IGDPS RD  R ++  + +  N+E I      F+++  G++ A +L
Sbjct: 62  GHVPISLAGGATGMIGDPSGRDAERNLLDDEGLARNLEGILPQLRKFLEF-EGESAAKLL 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           +N  W   +  +D LR++G   +VN+M++ +SV+SR+     +SF EF+YM+LQ YD++ 
Sbjct: 121 DNRAWTVGVGVLDFLRDVGKHVTVNQMVAKDSVKSRMSEGGGISFTEFSYMLLQGYDYLW 180

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG-AI 245
           LA N +C LQ+GGSDQWGNI+ G+DL  R      +ALT PLLT   G+K GKT  G  I
Sbjct: 181 LADNENCELQVGGSDQWGNIVLGVDLIRRKLGQTAYALTWPLLTKPDGSKYGKTAGGETI 240

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIA 303
           WL+    SPY F+Q W  +DD++V     +LT L + EI+ +     K+      ++++A
Sbjct: 241 WLSPNKMSPYRFYQAWIGVDDSEVRKLLLQLTFLSLEEIEVLVAEHEKDPQQRVGQRMLA 300

Query: 304 TEITTMVHGREEAEKAATAAMECFD------------MSIHSQHMPTISISKDEVSRGMG 351
            E+T +VHG   A  A  A+   FD            +   S  +P+ +I     + G  
Sbjct: 301 GELTGIVHGEAAAASAMEASAVLFDPDVDITAVSESALEFVSGEVPSTAIQ----TLGSS 356

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           ++ L+V++G   S  +A+R +    I +N   +++        D      + L  GKK  
Sbjct: 357 IIDLLVESGLCQSRKDAKRAITEGGIYLNGGRVADADFLPSKGDLLHQKYVLLRRGKKQW 416

Query: 412 IICHL 416
            +  +
Sbjct: 417 HLVTV 421


>gi|313901028|ref|ZP_07834516.1| tyrosine--tRNA ligase [Clostridium sp. HGF2]
 gi|312953986|gb|EFR35666.1| tyrosine--tRNA ligase [Clostridium sp. HGF2]
          Length = 411

 Score =  436 bits (1122), Expect = e-120,   Method: Composition-based stats.
 Identities = 142/416 (34%), Positives = 220/416 (52%), Gaps = 20/416 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG I+ +++P+ L+   + G +T YIG D T  SLH GH + L+    L++ G
Sbjct: 4   LFDELKYRGLINDVTSPQ-LEEKLNNGGLTFYIGTDPTGDSLHIGHYSSLLCAKRLKEHG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H PI L+GG T  IGDP    E R M+  + ++ N + +     +   +        M+N
Sbjct: 63  HHPIMLVGGATGFIGDPKASGE-RNMLTKEVLEHNYQCLSKQIEALFGFE-------MVN 114

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W   I  ID LR+ G +F+VN M++ E+V+ RL     +S+ EF+YMILQA DF+ L
Sbjct: 115 NLDWTKDISVIDFLRDYGKYFNVNYMINKETVKRRLDA--GISYTEFSYMILQALDFLHL 172

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSGAI 245
            ++  C LQ+GG DQWGNI  G++L  +      + + LT PL+T A GTK GK+ SG +
Sbjct: 173 YEDKGCTLQLGGQDQWGNITSGLELIRKKHGADVECYGLTMPLITKADGTKFGKSESGTV 232

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIA 303
           WL+K  TS Y  +Q+  N +D  V+ + K+LT L   EID + +    E    EA+K +A
Sbjct: 233 WLDKHKTSAYEMYQFLVNSEDEKVIDYLKKLTFLSKEEIDALEEKVKTEPHFREAQKTLA 292

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS-----ISKDEVSRGMGLLTLIVK 358
            E+ T +HG EE  KA       F  +I       +          E++  + L   +V+
Sbjct: 293 KEVVTFLHGEEEYNKALKITNALFKGNIKELDAGELQDALKGFEAAEIADELTLTDTLVQ 352

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           AG A+S  EAR  +   +I+IN   + + +  +  ++  S G   +  GK+N+ + 
Sbjct: 353 AGIASSKREAREWINQGSIQINGDKVKDVEFIVSSKNAISKGRTLIKKGKRNYFVI 408


>gi|282890555|ref|ZP_06299078.1| hypothetical protein pah_c022o146 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281499552|gb|EFB41848.1| hypothetical protein pah_c022o146 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 430

 Score =  436 bits (1121), Expect = e-120,   Method: Composition-based stats.
 Identities = 145/424 (34%), Positives = 233/424 (54%), Gaps = 16/424 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + + IL ERGFI  +++        +   +  Y G+D TA SLH G++  +M L W Q+ 
Sbjct: 3   NVIDILQERGFIEAMTSNNL--KEITSTPLKVYCGFDPTAESLHLGNMVAIMGLAWFQRC 60

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH PI+++GG T +IGDPS R + R ++    IQ+N+  I+    + +K+ +   + ++L
Sbjct: 61  GHTPIAIVGGATGMIGDPSGRSKERNILDDDSIQKNLYGIRKNIEAVLKHSSKDVELIIL 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W      +D LR++G +F V  ML+ +SV+ RL+ E+ LSF EF+Y +LQ YDF+ 
Sbjct: 121 NNYDWFKGFSLVDFLRDVGKYFRVGTMLAKDSVKIRLESEEGLSFTEFSYQLLQGYDFLH 180

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L  ++   L+MGGSDQWGNI  G DL  +++   +  LT PLLT + G K GK+  GAIW
Sbjct: 181 LYDHHGVTLEMGGSDQWGNITAGTDLVRKVRGKAVHGLTFPLLTRSDGKKFGKSEQGAIW 240

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKIIA 303
           L+ EM SPY F+QY   + DADV+   K LT + M EI   ++M        N A++ +A
Sbjct: 241 LSSEMLSPYEFYQYLFRVADADVIKLMKILTFMEMDEIRIYEKMMTQSDYVANTAQRKLA 300

Query: 304 TEITTMVHGREEAEKA----------ATAAMECFDMSIHSQHMPTISISKDEVSRGMGLL 353
            E+T +VHG E    A          A  A++   ++  +  MP  ++S + +     L+
Sbjct: 301 EEVTRIVHGEEGLRIALKVTEGAAPGAATALDAEVLNNLADDMPNYTVSMENI-LNRRLV 359

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            ++ +     S  + R+ +K+  + +NN  I  E   +  +       + ++FGKKN I+
Sbjct: 360 DVVSEITPERSKGDLRKLIKNGGVYLNNLRIEEENYILTPKALIDGNLMLIAFGKKNKIL 419

Query: 414 CHLC 417
             + 
Sbjct: 420 VRVS 423


>gi|301120217|ref|XP_002907836.1| tyrosyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
 gi|262106348|gb|EEY64400.1| tyrosyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
          Length = 428

 Score =  435 bits (1120), Expect = e-120,   Method: Composition-based stats.
 Identities = 146/426 (34%), Positives = 220/426 (51%), Gaps = 17/426 (3%)

Query: 6   SDFLSILSERGFIHQISNPRE---LDILCSQGVV-TAYIGYDLTASSLHAGHLTQLMLLF 61
           S  L+ L +RG +  +++      +D L         Y G+D TA SLH G+L Q + L 
Sbjct: 2   SRALAALRQRGMLAALTHQEAGASIDKLLQSSRAPAVYCGFDPTADSLHLGNLLQGIALR 61

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKT 121
             Q+ G +PI L+GG T +IGDPS + E R ++    +  N ++I    S+ + +   KT
Sbjct: 62  HFQRAGVRPILLVGGATGMIGDPSGKSEERVLLSDDTVLHNAQEIAKGLSAVLDFDDPKT 121

Query: 122 DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA 181
            A++ NN  W   +  +  +R+IG  F VN ML  ESV+ RL+ +Q +SFLEF+Y + QA
Sbjct: 122 GAIICNNAEWHTQMSAVTWMRDIGRHFRVNAMLQRESVKKRLETDQGISFLEFSYQLFQA 181

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
           YDF+ L +NY C  Q+GGSDQWGNI  GI+L  +     +F  T  LLTTA+G K GK+ 
Sbjct: 182 YDFLHLYRNYGCVAQIGGSDQWGNIASGIELVRKSTGEGVFGATLALLTTATGEKYGKSA 241

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAK 299
             AIWL+ E TS ++F+Q++   DD DV       T   + EI  +     K      A+
Sbjct: 242 GNAIWLDSEKTSVFDFYQFFLRSDDRDVEKLLNSFTFREVDEIHGIIAEHEKAPEKRAAQ 301

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRG 349
           K++A EIT M+HG+E  + A  A    F                   P   +S+ +V   
Sbjct: 302 KVLAEEITVMMHGQEGLKAALDATEMLFGKKTGPLTSEEMLCMAGDAPMTVLSRADV-IN 360

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
             L+ L V+ G   S  E RR +KS  + +NN  + +  L+I   +      + +  G++
Sbjct: 361 QSLVDLAVRIGATKSKAECRRLIKSGGVYLNNERVESAALRIGKSNLLDDKVLVVRVGRR 420

Query: 410 NHIICH 415
           N+ I  
Sbjct: 421 NNFIVQ 426


>gi|300819606|ref|ZP_07099799.1| tyrosyl-tRNA synthetase [Escherichia coli MS 107-1]
 gi|300527854|gb|EFK48916.1| tyrosyl-tRNA synthetase [Escherichia coli MS 107-1]
          Length = 358

 Score =  435 bits (1120), Expect = e-120,   Method: Composition-based stats.
 Identities = 140/339 (41%), Positives = 201/339 (59%), Gaps = 5/339 (1%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 8   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 67

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +QE ++KI+   + F+ +  G+  A+ 
Sbjct: 68  AGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDCGENSAIA 127

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDF 184
            NN  W  ++  +  LR+IG  FSVN+M++ E+V+ RL RE Q +SF EF+Y +LQ YDF
Sbjct: 128 ANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNREDQGISFTEFSYNLLQGYDF 187

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K Y   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 188 ACLNKQYGVVLQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 247

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI   +   K  GK     + +
Sbjct: 248 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINALEEEDKNSGKAPRG-QYV 306

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS 340
           +A ++T +VHG E  + A       F  S+ +       
Sbjct: 307 LAEQVTRLVHGEEGLQAAKRITECLFSGSLSALSEADFE 345


>gi|304558971|gb|ADM41635.1| Tyrosyl-tRNA synthetase [Edwardsiella tarda FL6-60]
          Length = 376

 Score =  435 bits (1119), Expect = e-120,   Method: Composition-based stats.
 Identities = 136/373 (36%), Positives = 202/373 (54%), Gaps = 11/373 (2%)

Query: 52  GHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFS 111
           GHL  L+ L   Q+ GHKP++L+GG T +IGDPSF+   R++   + +Q  ++KI+   +
Sbjct: 2   GHLVPLLCLKRFQQAGHKPVALVGGATGLIGDPSFKATERKLNTEETVQSWVDKIRRQVA 61

Query: 112 SFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLS 170
            F+ +  G   A+  NN  W   +  +  LR+IG  FSVN+M++ E+V+ RL R+   +S
Sbjct: 62  PFLDFDCGSNSAIAANNYDWFGGMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDVGIS 121

Query: 171 FLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLT 230
           F EF+Y +LQ YDF  L + +   LQ+GGSDQWGNI  GIDL  R+   +++ LT PL+T
Sbjct: 122 FTEFSYNLLQGYDFASLNRMHGVELQIGGSDQWGNITSGIDLTRRMNQQQVWGLTVPLIT 181

Query: 231 TASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRM 287
            A GTK GKT  GA+WL+ + TSPY F+Q+W N  DADV  F K  T + + EI   +  
Sbjct: 182 KADGTKFGKTEGGAVWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINALEDE 241

Query: 288 AKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISI 341
            K  GK    A+ ++A  +T +VHG    E A       F  S+          +    +
Sbjct: 242 DKNSGKAPR-AQYVLAEAVTRLVHGEAGLEAAKRITHSLFSGSLSEMTEADFAQLAQDGM 300

Query: 342 SKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
              E+ +G  L   +V A    S  +AR+ + SNA+ +N    S+ +      D      
Sbjct: 301 PMVEMDKGADLQQALVDAELQPSRGQARKTIASNAVTVNGEKQSDPEYTFSDGDRLFGRY 360

Query: 402 IKLSFGKKNHIIC 414
             L  GKKN+ + 
Sbjct: 361 TLLRRGKKNYCLI 373


>gi|160915069|ref|ZP_02077282.1| hypothetical protein EUBDOL_01077 [Eubacterium dolichum DSM 3991]
 gi|158432868|gb|EDP11157.1| hypothetical protein EUBDOL_01077 [Eubacterium dolichum DSM 3991]
          Length = 410

 Score =  435 bits (1119), Expect = e-120,   Method: Composition-based stats.
 Identities = 139/416 (33%), Positives = 215/416 (51%), Gaps = 20/416 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG I  +++P  L+   + G +T YIG D T  SLH GH + L+    L++ G
Sbjct: 3   LFDELKWRGLIDNVTSPE-LEEKLNNGGLTFYIGTDPTGDSLHIGHYSSLLCAKRLKEHG 61

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H P+ L+GG T  IGDP    E R M+  + ++ N   +         +        M+N
Sbjct: 62  HHPLMLVGGATGFIGDPKATGE-RSMLTKEVLEHNYHCLSKQIEELFGFE-------MVN 113

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W   I  ID LR+IG  F+V+ M++ E+V+ RL+    +S+ EF+YMILQA+DF+ L
Sbjct: 114 NLDWTKDITIIDFLRDIGKLFNVSYMMNKETVKRRLES--GISYTEFSYMILQAHDFLHL 171

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSGAI 245
            +   C LQ+GG DQWGNI  G++L  +      + + LT PL+T A GTK GK+ +G +
Sbjct: 172 YEEKGCTLQIGGQDQWGNITSGLELIRKKHGADVECYGLTMPLITKADGTKFGKSETGTV 231

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIA 303
           WL+K  TS Y  +Q+  N +D  V+ + K+LT L   EID           + EA+K +A
Sbjct: 232 WLDKNKTSAYEMYQFLLNSEDEKVIDYLKKLTFLKKEEIDTLEECVKTAPHLREAQKALA 291

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS-----ISKDEVSRGMGLLTLIVK 358
            E+ T +HG  E  KA   +   F   + +      S       K EV+  + L   +V 
Sbjct: 292 KEVVTFLHGENEYNKAIKISEALFKGDVKTLSSEEASDALKGFEKREVADHITLTEALVS 351

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +G A+S  EAR  +K N+I++N   I++    +  +      +  +  GK+N+ + 
Sbjct: 352 SGIASSKREAREWIKGNSIQVNGEKITDVDFVVSSEHALCHKDTLIKRGKRNYFVI 407


>gi|327483318|gb|AEA77725.1| Tyrosyl-tRNA synthetase cluster 1 [Vibrio cholerae LMA3894-4]
          Length = 426

 Score =  435 bits (1118), Expect = e-119,   Method: Composition-based stats.
 Identities = 146/426 (34%), Positives = 218/426 (51%), Gaps = 23/426 (5%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L +RG I Q +    L    +      Y G+D TA SLH GHL  L++L   Q  G
Sbjct: 6   LFDDLQQRGLIAQSTPLEALVERFTT-PQVLYCGFDPTAGSLHIGHLVPLLMLKRFQNAG 64

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM-L 126
           H+ I+L+GG T +IGDPSF+   R +  +Q +Q+ +  +    +  +   +    +LM +
Sbjct: 65  HQAIALIGGATGMIGDPSFKANERVLNSAQTVQQWVSDLSQQITQLMASQSENCASLMTV 124

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDFV 185
           NN  W+  I  ID  R++G  FSVN M++ ESV+ RL R +Q +SF EF+Y +LQ+YDF 
Sbjct: 125 NNADWIGKINLIDFFRDVGKHFSVNTMINRESVKQRLARPDQGISFTEFSYSLLQSYDFA 184

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L + + C LQ+GG+DQWGNI+ GIDL  RL   ++  LT PL+T + GTK GKT SGA+
Sbjct: 185 HLNREFGCALQIGGNDQWGNIVSGIDLTRRLNGVEVCGLTLPLITKSDGTKFGKTESGAV 244

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIA 303
           WL    TSPY F+Q+W N DDADV  F    T L  +EI+ + +         +A++I+A
Sbjct: 245 WLESRKTSPYRFYQFWLNSDDADVYRFLAYYTFLSTAEIEEIRQADALRAGKPQAQQILA 304

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIH-----------SQHMPTISISKDEVSRGMGL 352
             +T  VHG E    A       F   +               +P ++ S+ +    + L
Sbjct: 305 EHVTRFVHGEEGLAAAQRITQALFSGDVSYLSLSELAQLELDGLPCVAASRTDSLLDLLL 364

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
            + +  +       +AR  L++ AI++N   +  E   +            L  GKK   
Sbjct: 365 SSGLASS-----KRQAREWLENGAIRVNGERVQQEG--VLSGFALFDRYYVLQRGKKQFA 417

Query: 413 ICHLCG 418
           +  L G
Sbjct: 418 LIKLEG 423


>gi|94502122|ref|ZP_01308624.1| tyrosyl-tRNA synthetase [Oceanobacter sp. RED65]
 gi|94425759|gb|EAT10765.1| tyrosyl-tRNA synthetase [Oceanobacter sp. RED65]
          Length = 430

 Score =  434 bits (1117), Expect = e-119,   Method: Composition-based stats.
 Identities = 148/428 (34%), Positives = 225/428 (52%), Gaps = 21/428 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            +  L  RG  +  +   EL      G  T Y G+D TA SLH G L  L++L   Q+ G
Sbjct: 5   LIDDLKARGLFNDCTAEAELIEKLESGCQTLYCGFDPTADSLHIGSLVPLLVLKRFQEAG 64

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+P++L+GG T +IGDPSF+   R++     +   +EK+K   S+FI +  G   A ++N
Sbjct: 65  HRPLALVGGATGLIGDPSFKAAERQLNGPDVVAGWVEKLKAQVSAFIDFDAGDKSAKVVN 124

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDFVE 186
           N  W+  +  I+ LR++G +FSVN+M+  ESV+ R++RE   +SF EF YM+LQ+YDF +
Sbjct: 125 NLDWVGEMNVIEFLRDVGKYFSVNQMIQKESVKQRIEREGSGISFTEFTYMLLQSYDFAK 184

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L +   C LQ+GGSDQWGNI  G +L  R+   ++F LT PL+T A GTK GKT SG IW
Sbjct: 185 LNETESCVLQIGGSDQWGNITGGTELTRRMHGNQVFGLTLPLVTKADGTKFGKTESGTIW 244

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIAT 304
           L+ + TSPY F+Q+W N  DADV  F +  T L + EI+ + K   +      A+ I+A 
Sbjct: 245 LDPKRTSPYAFFQFWMNTADADVYKFLRYFTFLSIEEIEAIEKADAEVQGRKSAQGILAK 304

Query: 305 EITTMVHGREEAEKAATAAMECFDMS-----------IHSQHMPTISISKDEVSRGMGLL 353
           E+T ++HG E    A       F              I    +P+  +   E++    L 
Sbjct: 305 EVTRLLHGEEGLAAAERITEALFSGDATQLSEHDLEQIKQDGLPSSDLDTSELAD-KPLT 363

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSI-----ISNEKLQIKLQDFDSTGNIKLSFGK 408
           +++ +AG      + +  L  NA+ +N        + N  +    +         +  GK
Sbjct: 364 SILSEAGLGQGK-QIKDALGRNAVIVNGQAYGMDDLMNATVIFSKEKAMYGRFFIIKLGK 422

Query: 409 KNHIICHL 416
           K H +  +
Sbjct: 423 KKHHLFEI 430


>gi|242076048|ref|XP_002447960.1| hypothetical protein SORBIDRAFT_06g018870 [Sorghum bicolor]
 gi|241939143|gb|EES12288.1| hypothetical protein SORBIDRAFT_06g018870 [Sorghum bicolor]
          Length = 521

 Score =  434 bits (1117), Expect = e-119,   Method: Composition-based stats.
 Identities = 143/453 (31%), Positives = 220/453 (48%), Gaps = 40/453 (8%)

Query: 2   PAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
            A  +  + +L +RG +   ++          G +  Y G+D TA SLH G+L  L+ L 
Sbjct: 72  TAASAGVVDVLMKRGLVEATTSEAL--AAARPGELKVYCGFDPTAESLHLGNLLGLVALS 129

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFI------- 114
           W ++ GH  ++L+GG T  +GDPS +   R  +    ++ N + IK + +  +       
Sbjct: 130 WFRRCGHTAVALIGGATGRVGDPSGKSSERPELDIAAVEANSDAIKSLVAQILGRVPEPA 189

Query: 115 ----------------KYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
                                    ++L+N  W   I  +D LRE+G F  V  M++ ES
Sbjct: 190 HHSHSGQKEQPSAISADSSQRMGSFVILDNYDWWKEITLLDFLREVGRFARVGSMIAKES 249

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
           V+ RL  E  +S+ EF Y +LQ YDF+ + KN    +Q+GGSDQWGNI  G +L  ++  
Sbjct: 250 VKKRLASEDGMSYTEFTYQLLQGYDFLYMFKNMGVNVQIGGSDQWGNITAGTELIRKILQ 309

Query: 219 PK-LFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT 277
            +    LT PLL  + GTK GKT  GAIWL+ +M SPY F+QY+  + D DV+ F K LT
Sbjct: 310 VEGAHGLTFPLLLKSDGTKFGKTEDGAIWLSSKMLSPYKFYQYFFAVPDIDVIRFMKILT 369

Query: 278 TLPMSEIDR---MAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDM----- 329
            L + EI+      K  G   N  +K +A E+T  VHG E  E+A  A            
Sbjct: 370 FLSLDEIEELEDSMKKPGYVPNTVQKRLAEEVTRFVHGEEGLEEALKATEALRPGAQTQL 429

Query: 330 -----SIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSII 384
                   +  +P+ S++ D+V +   L+ L V  G  TS +  +R +K   + +NN  I
Sbjct: 430 DAQTIEGIADDVPSCSLAYDQVFKS-PLVDLAVSTGLLTSKSAVKRLIKQGGLYLNNVRI 488

Query: 385 SNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            +E   ++  D      + LS GKKN ++  + 
Sbjct: 489 DSEDKLVEDGDIVDGKVLLLSAGKKNKMVVRIS 521


>gi|229519851|ref|ZP_04409285.1| tyrosyl-tRNA synthetase [Vibrio cholerae TM 11079-80]
 gi|229343139|gb|EEO08123.1| tyrosyl-tRNA synthetase [Vibrio cholerae TM 11079-80]
          Length = 434

 Score =  434 bits (1117), Expect = e-119,   Method: Composition-based stats.
 Identities = 148/424 (34%), Positives = 221/424 (52%), Gaps = 19/424 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L +RG I Q +    L           Y G+D TA SLH GHL  L++L   Q  G
Sbjct: 14  LFDDLQQRGLIAQSTPLEALVERFVT-PQVLYCGFDPTAGSLHIGHLVPLLMLKRFQNAG 72

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM-L 126
           H+ I+L+GG T +IGDPSF+   R +  +Q +Q+ +  +    +  +   +    +LM +
Sbjct: 73  HQAIALIGGATGMIGDPSFKANERVLNSAQTVQQWVSDLSQQITQLMASQSENCASLMTV 132

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDFV 185
           NN  W+  I  ID  R++G  FSVN M++ ESV+ RL R +Q +SF EF+Y +LQ+YDF 
Sbjct: 133 NNADWIGKINLIDFFRDVGKHFSVNAMINRESVKQRLARPDQGISFTEFSYSLLQSYDFA 192

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L + + C LQ+GG+DQWGNI+ GIDL  RL   ++  LT PL+T + GTK GKT SGA+
Sbjct: 193 HLNREFGCALQIGGNDQWGNIVSGIDLTRRLNGAEVCGLTLPLITKSDGTKFGKTESGAV 252

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIA 303
           WL    TSPY F+Q+W N DDADV  F    T L  +EI+ + +         +A++I+A
Sbjct: 253 WLESSKTSPYRFYQFWLNSDDADVYRFLAYYTFLSTAEIEEIRQADALRAGKPQAQQILA 312

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV------ 357
             +T  VHG E    A       F   +   ++    +++ E+  G+  +  +       
Sbjct: 313 EHVTRFVHGEEGLAAAQRITQALFSGDVS--YLSLSELAQLEL-DGLPCVAALRSDSLLD 369

Query: 358 ---KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
               +G A+S  +AR  L++ AI++N   +  E   +            L  GKK   + 
Sbjct: 370 LLLSSGLASSKRQAREWLENGAIRVNGERVQQEG--VLSGFALFDRYYVLQRGKKQFALI 427

Query: 415 HLCG 418
            L G
Sbjct: 428 KLEG 431


>gi|323699892|ref|ZP_08111804.1| tyrosyl-tRNA synthetase [Desulfovibrio sp. ND132]
 gi|323459824|gb|EGB15689.1| tyrosyl-tRNA synthetase [Desulfovibrio desulfuricans ND132]
          Length = 424

 Score =  434 bits (1117), Expect = e-119,   Method: Composition-based stats.
 Identities = 146/418 (34%), Positives = 221/418 (52%), Gaps = 12/418 (2%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            ++ L  RG I  +++   +           Y G+D TA SLH G+L  L  L  +Q+ G
Sbjct: 2   LMNELEWRGNIQDMTDAEGIARFLGTRGNGVYAGFDPTAESLHVGNLLVLTTLVRMQRCG 61

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
            +PI L+GG T +IGDPS +D  R+++ +  +    E I G   +F++  TG T  ++ N
Sbjct: 62  LRPIFLLGGATGMIGDPSGKDVERQLIDTTTVAAQAEMIGGQIEAFVRRNTG-TAPVLRN 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDFVE 186
           N  W   I  ++ LR++G  FSVN ML+ ESVR R+ RE + +S+ EF+YM+LQ++DF+ 
Sbjct: 121 NYHWFKDINTMEFLRDVGKHFSVNAMLNKESVRGRIDREGEGISYTEFSYMLLQSFDFLH 180

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L +   CR+Q+GGSDQWGNI  GIDL  R    + F +T PLLTTASG K GK+   A++
Sbjct: 181 LFREEGCRMQIGGSDQWGNITSGIDLIRRAAGGRAFGITLPLLTTASGRKFGKSEGNAVF 240

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIAT 304
           LN E T  Y+F Q+W N +D D + F K  T L  + I  +     +   + EA++ +A 
Sbjct: 241 LNAEKTPVYHFHQFWLNTEDRDAIRFLKLFTFLDRTVIAELEAAVEERPHLREAQRRLAD 300

Query: 305 EITTMVHGREEAEKAATAAMECF-DMSIHSQHMPTISISKDEVSR-------GMGLLTLI 356
           E+T MVHGR   +    AA   F D  + +  M  +  +                L +L+
Sbjct: 301 EVTCMVHGRTALDAVVGAAQALFGDGDLRAVDMAALRGAVSAAPSLVLGHGVPTDLCSLL 360

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           V  G A S  +ARR  +   + +NN  + +        DF     + +  G+K H + 
Sbjct: 361 VGLGMAQSRGQARRDAQGGGVYVNNRRVRDAAFVPTDADFLDGEMLIVRKGRKIHGVV 418


>gi|229530307|ref|ZP_04419695.1| tyrosyl-tRNA synthetase [Vibrio cholerae 12129(1)]
 gi|229332080|gb|EEN97568.1| tyrosyl-tRNA synthetase [Vibrio cholerae 12129(1)]
          Length = 434

 Score =  434 bits (1116), Expect = e-119,   Method: Composition-based stats.
 Identities = 146/426 (34%), Positives = 218/426 (51%), Gaps = 23/426 (5%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L +RG I Q +    L    +      Y G+D TA SLH GHL  L++L   Q  G
Sbjct: 14  LFDDLQQRGLIAQSTPLEALVERFTT-PQVLYCGFDPTAGSLHIGHLVPLLMLKRFQNAG 72

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM-L 126
           H+ I+L+GG T +IGDPSF+   R +  +Q +Q+ +  +    +  +   +    +LM +
Sbjct: 73  HQAIALIGGATGMIGDPSFKANERVLNSAQTVQQWVSDLSQQITQLMASQSENCASLMTV 132

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDFV 185
           NN  W+  I  ID  R++G  FSVN M++ ESV+ RL R +Q +SF EF+Y +LQ+YDF 
Sbjct: 133 NNADWIGKINLIDFFRDVGKHFSVNTMINRESVKQRLARPDQGISFTEFSYSLLQSYDFA 192

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L + + C LQ+GG+DQWGNI+ GIDL  RL   ++  LT PL+T + GTK GKT SGA+
Sbjct: 193 HLNREFGCALQIGGNDQWGNIVSGIDLTRRLNGVEVCGLTLPLITKSDGTKFGKTESGAV 252

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIA 303
           WL    TSPY F+Q+W N DDADV  F    T L  +EI+ + +         +A++I+A
Sbjct: 253 WLESRKTSPYRFYQFWLNSDDADVYRFLAYYTFLSTAEIEEIRQADALRAGKPQAQQILA 312

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIH-----------SQHMPTISISKDEVSRGMGL 352
             +T  VHG E    A       F   +               +P ++ S+ +    + L
Sbjct: 313 EHVTRFVHGEEGLAAAQRITQALFSGDVSYLSLSELAQLELDGLPCVAASRTDSLLDLLL 372

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
            + +  +       +AR  L++ AI++N   +  E   +            L  GKK   
Sbjct: 373 SSGLASS-----KRQAREWLENGAIRVNGERVQQEG--VLSGFALFDRYYVLQRGKKQFA 425

Query: 413 ICHLCG 418
           +  L G
Sbjct: 426 LIKLEG 431


>gi|153828422|ref|ZP_01981089.1| tyrosyl-tRNA synthetase [Vibrio cholerae 623-39]
 gi|148876131|gb|EDL74266.1| tyrosyl-tRNA synthetase [Vibrio cholerae 623-39]
          Length = 434

 Score =  434 bits (1116), Expect = e-119,   Method: Composition-based stats.
 Identities = 145/426 (34%), Positives = 217/426 (50%), Gaps = 23/426 (5%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L +RG I Q +    L    +      Y G+D TA SLH GHL  L++L   Q  G
Sbjct: 14  LFDDLQQRGLIAQSTPLEALVERFTT-PQVLYCGFDPTAGSLHIGHLVPLLMLKRFQDAG 72

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM-L 126
           H+ I+L+GG T +IGDPSF+   R +  +Q +Q+ +  +    +  +   +     L+ +
Sbjct: 73  HQAIALIGGATGMIGDPSFKANERALNSAQTVQQWVSDLSQQITHLMASQSENPAQLITV 132

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDFV 185
           NN  W+  I  ID  R++G  FSVN M++ ESV+ RL R +Q +SF EF+Y +LQ+YDF 
Sbjct: 133 NNADWIGKINLIDFFRDVGKHFSVNTMINRESVKQRLARPDQGISFTEFSYSLLQSYDFA 192

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L + + C LQ+GG+DQWGNI+ GIDL  RL   ++  LT PL+T + GTK GKT SGA+
Sbjct: 193 HLNREFGCTLQIGGNDQWGNIVSGIDLTRRLNGAEVCGLTLPLITKSDGTKFGKTESGAV 252

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIA 303
           WL    TSPY F+Q+W N DDADV  F    T L  +EI+ + +         +A++I+A
Sbjct: 253 WLESSKTSPYRFYQFWLNSDDADVYRFLAYYTFLSTAEIEEIRQADALRAGKPQAQQILA 312

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIH-----------SQHMPTISISKDEVSRGMGL 352
             +T  VHG E    A       F   +               +P ++ S+ +    + L
Sbjct: 313 EHVTRFVHGEEGLAAAQRITQALFSGDLSYLSLSELAQLELDGLPCVAASRTDSLLDLLL 372

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
            + +  +       +AR  L++ AI++N   +  E   +            L  GKK   
Sbjct: 373 SSGLASS-----KRQAREWLENGAIRVNGERVQQEG--VLSGFALFDRYYVLQRGKKQFA 425

Query: 413 ICHLCG 418
           +  L G
Sbjct: 426 LIKLEG 431


>gi|323447669|gb|EGB03582.1| hypothetical protein AURANDRAFT_59618 [Aureococcus anophagefferens]
          Length = 385

 Score =  433 bits (1115), Expect = e-119,   Method: Composition-based stats.
 Identities = 173/394 (43%), Positives = 243/394 (61%), Gaps = 15/394 (3%)

Query: 31  CSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDES 90
            S G V AY+G+D TA SLH G L Q+M+L  LQK GH P+ L+GGGT+ +GDPS +DES
Sbjct: 1   MSGGPVAAYLGFDATADSLHVGSLLQIMILRLLQKHGHTPVVLVGGGTTKVGDPSGKDES 60

Query: 91  RRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSV 150
           R+++    I  NI  I  IF  F+ +G G   A+++NN  WL  + Y+  LRE GS FSV
Sbjct: 61  RKLLDDDAIAGNIAGISAIFDKFLDFGPG--GAVLVNNADWLDELAYVKFLREFGSHFSV 118

Query: 151 NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGI 210
           NRMLSFESV+ RL REQ LSFLEFNYMILQAYDFVELA+ YD +LQ+GGSDQWGNI+ G+
Sbjct: 119 NRMLSFESVKQRLGREQPLSFLEFNYMILQAYDFVELARRYDVKLQLGGSDQWGNIVSGV 178

Query: 211 DLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVV 270
           +L  R+    L  LT+PL+ T+ G KMGKT  GA+WL+    +PY++WQ+WRN  D DVV
Sbjct: 179 ELARRVDRKSLVGLTAPLIATSDGRKMGKTAEGAVWLSPGKLAPYDYWQFWRNTVDDDVV 238

Query: 271 SFAKRLTTLPMSEIDRMAKL-----QGKEINEAKKIIATEITTMVHGREEAEKAATAAME 325
            F +  T  P+ E+D + +          +N AK+ +A   TT++HG +           
Sbjct: 239 RFTRMFTDAPLEEVDALERELAAAPDAAAVNAAKRRLADACTTLLHGADALPDIHATVDR 298

Query: 326 CF-DMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSII 384
            F      +  +P +++   E    + ++  +V AGFA S +EA+R +K    +++ + +
Sbjct: 299 LFAGGGGSAASLPRVAVGDAE----ITVVDALVSAGFAKSKSEAKRLIKGGGARLDGAKV 354

Query: 385 SNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLCG 418
            +    + L+   +  ++KLS GKK H I  L G
Sbjct: 355 DDVDATVALE---AGVDVKLSSGKKKHAILELAG 385


>gi|319937189|ref|ZP_08011596.1| tyrosyl-tRNA synthetase [Coprobacillus sp. 29_1]
 gi|319807555|gb|EFW04148.1| tyrosyl-tRNA synthetase [Coprobacillus sp. 29_1]
          Length = 408

 Score =  433 bits (1115), Expect = e-119,   Method: Composition-based stats.
 Identities = 135/415 (32%), Positives = 214/415 (51%), Gaps = 18/415 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG I  +S+P  ++   + G +T YIG D T  SLH GH +  ++   L+  G
Sbjct: 3   IYDELVWRGLIKDVSSPE-VEEKLNNGGMTFYIGTDPTGDSLHIGHFSSFLISKRLKDAG 61

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H PI L+GG T +IGDP   D  R M+  +++Q N + +K        +        ++N
Sbjct: 62  HNPILLVGGATGLIGDPKP-DTERPMITREQVQHNFDCLKKQAQDLFGFE-------VVN 113

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W   + +ID LR+ G +F+VN ML+ + V+ RL  +  +++ EF+YMI+QA DF  L
Sbjct: 114 NYDWSKDLNFIDFLRDYGKYFNVNYMLNKDIVKRRL--DLGITYTEFSYMIMQAMDFYWL 171

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            +N DC +Q+ G DQWGNI  GI+L  +    + +  T PLLT + GTK GKT   AIWL
Sbjct: 172 YENKDCHMQVAGQDQWGNITAGIELIRKKSGKEAYGFTMPLLTKSDGTKFGKTNGHAIWL 231

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPM--SEIDRMAKLQGKEINEAKKIIATE 305
           ++E TSPY  +Q++ N +D  V+ + K LT L     E           + EA K +A E
Sbjct: 232 DREKTSPYEMYQFFINSEDEKVIDYLKFLTFLSKEEIEELEEKNKTQPHLREAHKALAKE 291

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS-----ISKDEVSRGMGLLTLIVKAG 360
           + T VH     E+A   +   F   I +  +  +      +   E+     +L  +V+ G
Sbjct: 292 VITFVHDEAAYEEALEISQMLFSGKIQTLTLAQVQSCFNGVPSIEMEEDTKILNALVQVG 351

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            A+S  EAR+ +   ++ IN   +++ +  IK ++        +  GKKN+ + +
Sbjct: 352 AASSNREARQFVTGGSVLINGEKVTDVEFVIKKENAFGKEATVIRRGKKNYYVIN 406


>gi|222475570|ref|YP_002563987.1| tyrosyl-tRNA synthetase (tyrS) [Anaplasma marginale str. Florida]
 gi|222419708|gb|ACM49731.1| tyrosyl-tRNA synthetase (tyrS) [Anaplasma marginale str. Florida]
          Length = 435

 Score =  433 bits (1115), Expect = e-119,   Method: Composition-based stats.
 Identities = 185/415 (44%), Positives = 266/415 (64%), Gaps = 5/415 (1%)

Query: 3   AFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
            FKS FL+ L  RG++HQ ++   LD L +   +TAYIG+D TA SLH G L Q+M++ +
Sbjct: 23  EFKSGFLNTLQVRGYLHQCTDDVALDELMALQPITAYIGFDCTARSLHIGSLMQIMVMRY 82

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD 122
           LQK GHK + L+GGGT+ IGDPS +D++R M+   EI  N   I    + F+  G G   
Sbjct: 83  LQKFGHKIVVLLGGGTTKIGDPSGKDKARAMLSEAEIAANKAGILATINKFLNQGDG--- 139

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
            ++ +N  WL  ++Y++ LREIGS FSVN ML  +SVRSRL R+Q+LSFLEF+Y++LQ+Y
Sbjct: 140 VVIADNAEWLGEVRYLEFLREIGSKFSVNAMLGLDSVRSRLDRDQNLSFLEFSYVLLQSY 199

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DFVEL + + C LQ+GG+DQWGNI+ GIDLG +L  P+L+ LT+ LL T++G KMGKT  
Sbjct: 200 DFVELHRRHKCVLQIGGADQWGNIVNGIDLGRKLGLPQLYGLTTQLLLTSTGEKMGKTAD 259

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKII 302
           GA+WL+ EM  P N+WQY+RN+ D +V    +  T LPM+EI  +  LQG+ INEAKK++
Sbjct: 260 GAVWLDAEMFDPGNYWQYFRNVPDVEVGRLLRLFTELPMNEIAELENLQGEAINEAKKVL 319

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFA 362
           ATE T + HG+  A  A  AA++ F+ +  +  +P   + K  +++G+ +  L+  AG  
Sbjct: 320 ATEATAICHGKSAALAAENAALQVFEHNDDA-GLPHFPLHKSLIAQGISVAKLLQLAGLE 378

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDST-GNIKLSFGKKNHIICHL 416
            S +  RR +K    KIN  ++ +    +   DF    G I +  GKK  I   +
Sbjct: 379 ESISAGRRLIKGRGCKINGMVVEDADHALTHADFARNSGYITVFCGKKRRIKVVV 433


>gi|262172421|ref|ZP_06040099.1| tyrosyl-tRNA synthetase [Vibrio mimicus MB-451]
 gi|261893497|gb|EEY39483.1| tyrosyl-tRNA synthetase [Vibrio mimicus MB-451]
          Length = 426

 Score =  433 bits (1115), Expect = e-119,   Method: Composition-based stats.
 Identities = 145/426 (34%), Positives = 217/426 (50%), Gaps = 23/426 (5%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L +RG I Q +    L    +      Y G+D TA SLH GHL  L++L   Q  G
Sbjct: 6   LFDDLQQRGLIAQSTPLEALVERFTT-PQVLYCGFDPTAGSLHIGHLVPLLMLKRFQDAG 64

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM-L 126
           H+ I+L+GG T +IGDPSF+   R +  +Q +Q+ +  +    +  +   +     L+ +
Sbjct: 65  HQAIALIGGATGMIGDPSFKANERALNSAQTVQQWVSDLSQQITHLMASQSENPAQLITV 124

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDFV 185
           NN  W+  I  ID  R++G  FSVN M++ ESV+ RL R +Q +SF EF+Y +LQ+YDF 
Sbjct: 125 NNADWIGKINLIDFFRDVGKHFSVNAMINRESVKQRLARPDQGISFTEFSYSLLQSYDFA 184

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L + + C LQ+GG+DQWGNI+ GIDL  RL   ++  LT PL+T + GTK GKT SGA+
Sbjct: 185 HLNREFGCTLQIGGNDQWGNIVSGIDLTRRLNGAEVCGLTLPLITKSDGTKFGKTESGAV 244

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIA 303
           WL    TSPY F+Q+W N DDADV  F    T L  +EI+ + +         +A++I+A
Sbjct: 245 WLESSKTSPYRFYQFWLNSDDADVYRFLAYYTFLSTAEIEEIRQADALRAGKPQAQQILA 304

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIH-----------SQHMPTISISKDEVSRGMGL 352
             +T  VHG E    A       F   +               +P ++ S+ +    + L
Sbjct: 305 EHVTRFVHGEEGLAAAQRITQALFSGDLSYLSLSELAQLELDGLPCVAASRTDSLLDLLL 364

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
            + +  +       +AR  L++ AI++N   +  E   +            L  GKK   
Sbjct: 365 SSGLASS-----KRQAREWLENGAIRVNGERVQQEG--VLSGFALFDRYYVLQRGKKQFA 417

Query: 413 ICHLCG 418
           +  L G
Sbjct: 418 LIKLEG 423


>gi|297580604|ref|ZP_06942530.1| tyrosyl-tRNA synthetase [Vibrio cholerae RC385]
 gi|297535020|gb|EFH73855.1| tyrosyl-tRNA synthetase [Vibrio cholerae RC385]
          Length = 434

 Score =  433 bits (1113), Expect = e-119,   Method: Composition-based stats.
 Identities = 148/426 (34%), Positives = 219/426 (51%), Gaps = 23/426 (5%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L +RG I Q +    L    +      Y G+D TA SLH GHL  L++L   Q  G
Sbjct: 14  LFDDLQQRGLIAQSTPLEALVERFA-MPQVLYCGFDPTAGSLHIGHLVPLLMLKRFQNAG 72

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM-L 126
           H+ I+L+GG T +IGDPSF+   R +  +Q +Q+ +  +    +  +   +    +LM +
Sbjct: 73  HQAIALIGGATGMIGDPSFKANERVLNSAQTVQQWVSDLSQQITQLMASQSENCASLMTV 132

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDFV 185
           NN  W+  I  ID  R++G  FSVN M++ ESV+ RL R +Q +SF EF+Y +LQ+YDF 
Sbjct: 133 NNADWIGKINLIDFFRDVGKHFSVNTMINRESVKQRLARPDQGISFTEFSYSLLQSYDFA 192

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L + + C LQ+GG+DQWGNI+ GIDL  RL   ++  LT PL+T + GTK GKT SGA+
Sbjct: 193 HLNREFGCALQIGGNDQWGNIVSGIDLTRRLNGAEVCGLTLPLITKSDGTKFGKTESGAV 252

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIA 303
           WL    TSPY F+Q+W N DDADV  F    T L  +EI+ + +         +A++I+A
Sbjct: 253 WLESSKTSPYRFYQFWLNSDDADVYRFLAYYTFLSTAEIEEIRQADALRAGKPQAQQILA 312

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIH-----------SQHMPTISISKDEVSRGMGL 352
             +T  VHG E    A       F   +               +P ++ S+ +    + L
Sbjct: 313 EHVTRFVHGEEGLAAAQRITQALFSGDVSYLSLSELAQLELDGLPCVAASRTDSLLDLLL 372

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
            + +  +       +AR  L++ AI++N   +  E        FD      L  GKK   
Sbjct: 373 SSGLASS-----KRQAREWLENGAIRVNGERVQQEGGLSGFALFD--RYYVLQRGKKQFA 425

Query: 413 ICHLCG 418
           +  L G
Sbjct: 426 LIKLEG 431


>gi|295096027|emb|CBK85117.1| tyrosyl-tRNA synthetase [Enterobacter cloacae subsp. cloacae NCTC
           9394]
          Length = 380

 Score =  432 bits (1112), Expect = e-119,   Method: Composition-based stats.
 Identities = 140/353 (39%), Positives = 203/353 (57%), Gaps = 11/353 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q 
Sbjct: 8   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQM 67

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++     +QE ++KI+   + F+ +  G   A+ 
Sbjct: 68  AGHKPVALVGGATGLIGDPSFKAAERKLNTEDTVQEWVDKIRKQVAPFLDFDCGDNSAIA 127

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDF 184
            NN  W   +  +  LR+IG  FSVN+M++ E+V+ RL R +Q +SF EF+Y +LQ YDF
Sbjct: 128 ANNYDWFGGMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDQGISFTEFSYNLLQGYDF 187

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K +   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 188 ACLNKLHGVSLQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 247

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI   +   K  GK    A+ +
Sbjct: 248 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMDIEEINALEEEDKNSGKAPR-AQYV 306

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSR 348
           +A E+T +VHG E    A       F+ ++        + +    +   E+ +
Sbjct: 307 LADEVTKLVHGEEGLAAAKRITASLFNGTLSDLSEADFEQLAQDGVPMVEMEK 359


>gi|152967097|ref|YP_001362881.1| tyrosyl-tRNA synthetase [Kineococcus radiotolerans SRS30216]
 gi|189083655|sp|A6WCS8|SYY_KINRD RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|151361614|gb|ABS04617.1| tyrosyl-tRNA synthetase [Kineococcus radiotolerans SRS30216]
          Length = 422

 Score =  432 bits (1112), Expect = e-119,   Method: Composition-based stats.
 Identities = 146/424 (34%), Positives = 218/424 (51%), Gaps = 20/424 (4%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +D    L  RG +   ++   L      G +T Y+G+D TA+SLH GHL Q++    LQ+
Sbjct: 2   NDVWDELQWRGLVAHSTDEAALQEALQTGPLTYYVGFDPTAASLHVGHLVQVLTAKRLQQ 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+P+ L+GG T ++GDP      R M     +   +  ++G  + F+ +  G   A M
Sbjct: 62  AGHRPLILVGGATGLVGDPRP-SAERTMNDPSVVAGWVTGLQGQIAPFLDF-DGPAAATM 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  W  S+  I+ LR++G  FSVNRML  E+V  RL     +SF EF+Y++LQ+ D++
Sbjct: 120 VNNLDWTQSMSTIEFLRDVGKHFSVNRMLDREAVSKRLAT-TGISFTEFSYVLLQSNDYL 178

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           +L + + C LQ+GGSDQWGNI  G +L  R+    + AL +PLLT A GTK GKT SGA+
Sbjct: 179 QLHRRHGCTLQLGGSDQWGNITAGCELVRRVDQRTVHALATPLLTKADGTKFGKTESGAV 238

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKIIA 303
           WL+ E+TSPY F Q+W N +DA VV + K  +  P  EI+      ++      A++ +A
Sbjct: 239 WLDPELTSPYAFHQFWLNAEDAKVVDYLKAFSFRPREEIEELGRQAVENPRARAAQRALA 298

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHS-----------QHMPTISISKDEVSRGMGL 352
            E+T +VHG E A     AA   F  S                +PT         R + L
Sbjct: 299 HEVTALVHGEEAAVAVEAAAAALFGGSDLEAIDERILRGALAELPT----AAPADRDVRL 354

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
             L    G A S + ARR +      +NN  +++ +  ++           L  GKK+  
Sbjct: 355 AQLFADTGLAPSLSGARRTIGEGGAYVNNIKLTDPEATLRDVQLLHGRYAVLRRGKKSLA 414

Query: 413 ICHL 416
              +
Sbjct: 415 SVAV 418


>gi|319428541|gb|ADV56615.1| tyrosyl-tRNA synthetase [Shewanella putrefaciens 200]
          Length = 417

 Score =  432 bits (1112), Expect = e-119,   Method: Composition-based stats.
 Identities = 140/415 (33%), Positives = 212/415 (51%), Gaps = 12/415 (2%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            +  L  RG I Q ++   +  L        Y G+D TA SLH GHL  L+LL   Q  G
Sbjct: 5   LIEDLECRGLIAQATDINAIKALLCT-PQVVYCGFDPTAGSLHIGHLVPLILLKRFQDAG 63

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+ I L+GG T +IGDPSF+   R +  +  +   + ++       +     +    ++N
Sbjct: 64  HRIIVLLGGATGLIGDPSFKAIERSLNSTTTVSNWVNELATQILDLM-LPKLREPLTLVN 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDFVE 186
           N  WL  +  I   R++G  FS+N ML+ ESVR RL+R +Q +SF EF+Y +LQ+YDF E
Sbjct: 123 NADWLNEVNVITFFRDVGKHFSINNMLNRESVRQRLQRPDQGISFTEFSYSLLQSYDFAE 182

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + + C LQ+GG+DQWGNI+ GID   R     +F LT P++T + GTK GK+ +G +W
Sbjct: 183 LNRRFGCCLQVGGNDQWGNILGGIDFTRRRNGSDVFGLTLPIITKSDGTKFGKSETGTVW 242

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIAT 304
           L+   TSPY F+Q+W N  DADV  F    T +   EI R+       +   +A+ ++A 
Sbjct: 243 LDAGKTSPYAFYQFWLNTPDADVYRFLHYYTFISCDEIARLQAHDKSSQSKPQAQHVLAE 302

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI-SISKDEVS----RGMGLLTLIVKA 359
           E+T  VHG      A   +   F   ++   +  I  +  D +      G+ L+  +V++
Sbjct: 303 ELTRFVHGEAGLASAQRISKALFHGEVNELQLNEIMQLQLDGLPTKQIAGLNLVDAVVQS 362

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           G A S   AR  +   AI +N    S  + Q+ L          L  G+K  ++ 
Sbjct: 363 GLAISKRAARELIAEGAISVNGKRASTAQCQLGLP--LYEKYWLLQRGRKQFVLL 415


>gi|255003560|ref|ZP_05278524.1| tyrosyl-tRNA synthetase (tyrS) [Anaplasma marginale str. Puerto
           Rico]
 gi|255004687|ref|ZP_05279488.1| tyrosyl-tRNA synthetase (tyrS) [Anaplasma marginale str. Virginia]
          Length = 414

 Score =  432 bits (1111), Expect = e-119,   Method: Composition-based stats.
 Identities = 185/415 (44%), Positives = 266/415 (64%), Gaps = 5/415 (1%)

Query: 3   AFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
            FKS FL+ L  RG++HQ ++   LD L +   +TAYIG+D TA SLH G L Q+M++ +
Sbjct: 2   EFKSGFLNTLQVRGYLHQCTDDVALDELMALQPITAYIGFDCTARSLHIGSLMQIMVMRY 61

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD 122
           LQK GHK + L+GGGT+ IGDPS +D++R M+   EI  N   I    + F+  G G   
Sbjct: 62  LQKFGHKIVVLLGGGTTKIGDPSGKDKARAMLSEAEIAANKAGILATINKFLNQGDG--- 118

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
            ++ +N  WL  ++Y++ LREIGS FSVN ML  +SVRSRL R+Q+LSFLEF+Y++LQ+Y
Sbjct: 119 VVIADNAEWLGEVRYLEFLREIGSKFSVNAMLGLDSVRSRLDRDQNLSFLEFSYVLLQSY 178

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DFVEL + + C LQ+GG+DQWGNI+ GIDLG +L  P+L+ LT+ LL T++G KMGKT  
Sbjct: 179 DFVELHRRHKCVLQIGGADQWGNIVNGIDLGRKLGLPQLYGLTTQLLLTSTGEKMGKTAD 238

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKII 302
           GA+WL+ EM  P N+WQY+RN+ D +V    +  T LPM+EI  +  LQG+ INEAKK++
Sbjct: 239 GAVWLDAEMFDPGNYWQYFRNVPDVEVGRLLRLFTELPMNEIAELENLQGEAINEAKKVL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFA 362
           ATE T + HG+  A  A  AA++ F+ +  +  +P   + K  +++G+ +  L+  AG  
Sbjct: 299 ATEATAICHGKSAALAAENAALQVFEHNDDA-GLPHFPLHKSLIAQGISVAKLLQLAGLE 357

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDST-GNIKLSFGKKNHIICHL 416
            S +  RR +K    KIN  ++ +    +   DF    G I +  GKK  I   +
Sbjct: 358 ESISAGRRLIKGRGCKINGMVVEDADHALTHADFARNSGYITVFCGKKRRIKVVV 412


>gi|313836595|gb|EFS74309.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL037PA2]
 gi|314928104|gb|EFS91935.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL044PA1]
 gi|314972104|gb|EFT16201.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL037PA3]
 gi|328907926|gb|EGG27686.1| tyrosine--tRNA ligase [Propionibacterium sp. P08]
          Length = 418

 Score =  431 bits (1110), Expect = e-119,   Method: Composition-based stats.
 Identities = 144/414 (34%), Positives = 218/414 (52%), Gaps = 14/414 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           SD L  L  RGFI   ++   L    +QG VT Y+G+D TA SLH GHL QLML+  LQ+
Sbjct: 2   SDLLDDLEWRGFIADSTDREALKAEFAQGPVTFYVGFDPTAKSLHIGHLVQLMLVRALQE 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+P+ L+GG T +IGDP    E RRM   + +   +E IK   S ++    G   A +
Sbjct: 62  RGHRPLLLVGGATGLIGDPKMTGE-RRMNDREVVAGWVESIKDQVSKYVD-TDGPNAARI 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  W      ++ LR++G  FSVNRML+ + V  RL+    +S+ EF+Y++LQ+ DF 
Sbjct: 120 VNNYDWTAEYTALNFLRDVGKHFSVNRMLARDVVARRLES--GISYTEFSYVLLQSLDFY 177

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           EL K Y C LQ G  DQWGNI  G +   R     +  L +PLLT A GTK GKT SG +
Sbjct: 178 ELHKRYGCTLQTGAQDQWGNITAGAEFIRRTTGDVVHGLVTPLLTKADGTKYGKTESGTV 237

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIA 303
           W++ E+TS Y F Q++ N +D+ V+ + K  +     EI+ +A+   +E     A++ +A
Sbjct: 238 WVDPELTSAYAFHQFFLNAEDSKVIEYLKIFSPRSREEIEELARRTEEEPWRRAAQRCLA 297

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISIS-KDEVSRG-------MGLLTL 355
            ++T +VHG ++ + A  AA   F             +S  DE+            ++  
Sbjct: 298 DDLTDLVHGVDQRKAAEAAAQAIFGCGELGDLDERTVLSLADELDAAHCDGGEYPTVVDA 357

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
           +V AG   + +  +R +      +NN+ ++    ++   DF       +  GKK
Sbjct: 358 MVAAGVVDTKSAGKRAVTEGGAYLNNAKVTEPDQRLTDDDFLCGRVALVRRGKK 411


>gi|218282313|ref|ZP_03488603.1| hypothetical protein EUBIFOR_01185 [Eubacterium biforme DSM 3989]
 gi|218216686|gb|EEC90224.1| hypothetical protein EUBIFOR_01185 [Eubacterium biforme DSM 3989]
          Length = 430

 Score =  431 bits (1110), Expect = e-119,   Method: Composition-based stats.
 Identities = 144/421 (34%), Positives = 223/421 (52%), Gaps = 20/421 (4%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           K +    L  RG +  +++   ++ + + G VT YIG D TA SLH GH + L++   L+
Sbjct: 20  KMELFEELKWRGLVDNVTSEE-VEDVINNGEVTFYIGTDPTADSLHIGHYSSLLMAKRLE 78

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           K GH PI L+GG T  IGDP    E R M+ S+ ++ N + +    S    +        
Sbjct: 79  KHGHHPIMLVGGATGFIGDPKATGE-RSMLTSEVLKSNYDALHAQISKLWGFD------- 130

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M+NN  W   I  ID LR+ G  F+VN ML+ E+V+ RL     +S+ EF+YMILQ+ DF
Sbjct: 131 MVNNLDWTKDITIIDFLRDYGKLFNVNYMLNKETVKKRLDS--GISYTEFSYMILQSLDF 188

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLS 242
           + L +   C +Q+GG DQWGNI  G++L  +      K + LT PL+T A GTK GK+ +
Sbjct: 189 LNLYQTRGCTMQIGGQDQWGNITSGLELIRKKCGADVKCYGLTMPLITKADGTKFGKSET 248

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKK 300
           G +WL+ + TSPY  +Q+  N DD+ V+ + K+LT L   EID +     +     EA+K
Sbjct: 249 GTVWLDPKKTSPYELYQFLFNTDDSKVIEYLKKLTFLTKEEIDALEVSLKEDAGRREAQK 308

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQH----MPTIS-ISKDEVSRGMGLLTL 355
            +A E+   +HG E  E A       F   ++       +  +  + K +   G  L+ +
Sbjct: 309 KLAEEVVRDLHGEEGLESALKITNALFRGQLNDLDEQQRLDAVKNMDKVDQEAGKSLIDV 368

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +V+A  A+S  EAR  +K N+I +N   +++E L I       +  + +  GKK +   +
Sbjct: 369 LVEAKIASSRREAREWIKGNSISLNGVKVNDETLVIDSTQAYVSNYVIIRRGKKRYYCLN 428

Query: 416 L 416
           L
Sbjct: 429 L 429


>gi|229525156|ref|ZP_04414561.1| tyrosyl-tRNA synthetase [Vibrio cholerae bv. albensis VL426]
 gi|229338737|gb|EEO03754.1| tyrosyl-tRNA synthetase [Vibrio cholerae bv. albensis VL426]
          Length = 430

 Score =  431 bits (1110), Expect = e-119,   Method: Composition-based stats.
 Identities = 147/426 (34%), Positives = 217/426 (50%), Gaps = 23/426 (5%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L +RG I Q +    L    +      Y G+D TA SLH GHL  L+LL   Q  G
Sbjct: 10  LFDDLQQRGLIAQSTPLEALVERFA-MPQVLYCGFDPTAGSLHIGHLVPLLLLKRFQNAG 68

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM-L 126
           H+ I+L+GG T +IGDPSF+   R +  +Q +Q+ +  +    +  +   +    +LM +
Sbjct: 69  HQAIALIGGATGMIGDPSFKANERVLNSAQTVQQWVSDLSQQITQLMASQSENCASLMTV 128

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDFV 185
           NN  W+  I  ID  R++G  FSVN M++ ESV+ RL R +Q +SF EF+Y +LQ+YDF 
Sbjct: 129 NNADWIGKINLIDFFRDVGKHFSVNTMINRESVKQRLARPDQGISFTEFSYSLLQSYDFA 188

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L + + C LQ+GG+DQWGNI+ GIDL  RL   ++  LT PL+T + GTK GKT SGA+
Sbjct: 189 HLNREFGCALQIGGNDQWGNIVSGIDLTRRLNGAEVCGLTLPLITKSDGTKFGKTESGAV 248

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIA 303
           WL    TSPY F+Q+W N DDADV  F    T L  +EI+ + +         +A++I A
Sbjct: 249 WLESSKTSPYRFYQFWLNSDDADVYRFLAYYTFLSTAEIEEIRQADALRAGKPQAQQIFA 308

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIH-----------SQHMPTISISKDEVSRGMGL 352
             +T  VHG E    A       F   +               +P ++ S+ +    + L
Sbjct: 309 EHVTRFVHGEEGLAAAQRITQALFSGDVSYLSLSELAQLELDGLPCVAASRTDSLLDLLL 368

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
            + +  +       +AR  L++ AI++N   +  E   +            L  GKK   
Sbjct: 369 SSGLASS-----KRQAREWLENGAIRVNGERVQQEG--VLSGFALFDRYYVLQRGKKQFA 421

Query: 413 ICHLCG 418
           +  L G
Sbjct: 422 LIKLEG 427


>gi|255744288|ref|ZP_05418241.1| tyrosyl-tRNA synthetase [Vibrio cholera CIRS 101]
 gi|262147287|ref|ZP_06028086.1| tyrosyl-tRNA synthetase [Vibrio cholerae INDRE 91/1]
 gi|97202332|sp|Q9KUQ0|SYY1_VIBCH RecName: Full=Tyrosyl-tRNA synthetase 1; AltName:
           Full=Tyrosine--tRNA ligase 1; Short=TyrRS 1
 gi|255738228|gb|EET93620.1| tyrosyl-tRNA synthetase [Vibrio cholera CIRS 101]
 gi|262031281|gb|EEY49896.1| tyrosyl-tRNA synthetase [Vibrio cholerae INDRE 91/1]
          Length = 426

 Score =  431 bits (1110), Expect = e-119,   Method: Composition-based stats.
 Identities = 148/426 (34%), Positives = 218/426 (51%), Gaps = 23/426 (5%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L +RG I Q +    L    +      Y G+D TA SLH GHL  L++L   Q  G
Sbjct: 6   LFDDLQQRGLIAQSTPLEALVERFAT-PQVLYCGFDPTAGSLHIGHLVPLLMLKRFQNAG 64

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM-L 126
           H+ I+L+GG T +IGDPSF+   R +  +Q +Q+ +  +    +  +        +LM +
Sbjct: 65  HQAIALIGGATGMIGDPSFKANERVLNSAQTVQQWVSDLSQQITQLMTSQGENCASLMAV 124

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDFV 185
           NN  W+  I  ID  R++G  FSVN M++ ESV+ RL R +Q +SF EF+Y +LQ+YDF 
Sbjct: 125 NNADWIGKINLIDFFRDVGKHFSVNAMINRESVKQRLARPDQGISFTEFSYSLLQSYDFA 184

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L + + C LQ+GG+DQWGNI+ GIDL  RL   ++  LT PL+T + GTK GKT SGA+
Sbjct: 185 HLNREFGCALQIGGNDQWGNIVSGIDLTRRLNGVEVCGLTLPLITKSDGTKFGKTESGAV 244

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIA 303
           WL    TSPY F+Q+W N DDADV  F    T L  +EI+ + +         +A++I+A
Sbjct: 245 WLESSKTSPYRFYQFWLNSDDADVYRFLAYYTFLSTAEIEEIRQADALRAGKPQAQQILA 304

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIH-----------SQHMPTISISKDEVSRGMGL 352
             +T  VHG E    A       F   +               +P ++ S+ +    + L
Sbjct: 305 EHVTRFVHGEEGLAAAQRITQALFSGDVSYLSLSELAQLELDGLPCVAASRTDSLLDLLL 364

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
            + +  +       +AR  L++ AI++N   +  E        FD      L  GKK   
Sbjct: 365 SSGLASS-----KRQAREWLENGAIRVNGERVQQEGGLSGFALFD--RYYVLQRGKKQFA 417

Query: 413 ICHLCG 418
           +  L G
Sbjct: 418 LIKLEG 423


>gi|33519830|ref|NP_878662.1| tyrosyl-tRNA synthetase [Candidatus Blochmannia floridanus]
 gi|81666781|sp|Q7VR52|SYY_BLOFL RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|33504175|emb|CAD83437.1| tyrosyl-tRNA synthetase [Candidatus Blochmannia floridanus]
          Length = 422

 Score =  431 bits (1109), Expect = e-119,   Method: Composition-based stats.
 Identities = 153/417 (36%), Positives = 232/417 (55%), Gaps = 9/417 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L ERG I QI++ ++L+ + +   +T Y G+D TA SLH GHL  L+ L   QK 
Sbjct: 4   NIIDYLYERGSIAQITDRKKLNAVLNSQPITLYCGFDPTADSLHIGHLAPLLCLKRFQKA 63

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK-TDALM 125
           GH+P+ L+GG T +IGDPSF+D  R++      Q+ I+KIK   + FI   +   + A +
Sbjct: 64  GHRPLILLGGATGLIGDPSFKDSERKLQSFNTTQKWIKKIKLQIALFIDCNSNNASQAHI 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYDF 184
           ++N +W  S+  +  LR+IG FFS+N+M++ + ++ RLK +   +S+ EF+Y ++Q+YDF
Sbjct: 124 IDNYSWFSSMNILTFLRDIGKFFSINKMINKDIIKKRLKNDNYGISYTEFSYNLMQSYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             + K+YD  LQ+GGSDQWGNII GIDL +R+     + LT PLLT  +  K GKT    
Sbjct: 184 AHIYKHYDAILQIGGSDQWGNIISGIDLIKRMYKKNAYGLTVPLLTNFNNIKFGKTEKNT 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           IWL+ E TSPY F+QYW NIDD     F K  T + + +I+   K +    ++A+ I+A 
Sbjct: 244 IWLDPEKTSPYQFYQYWINIDDKSAYHFLKIFTDISVQDINSF-KNRDHSYSQAQYILAE 302

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRGMGLLTLIVK 358
            +T +VHG+     A   +   F  +I          +    I    +     L   + K
Sbjct: 303 NMTQLVHGKRGLNIAQRISQNLFSYNILKLTLNDFHQLIQDGIPNIILETNTSLQEALTK 362

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +  ATS ++AR  +KSNAI IN    S  +   +  D        L  GKKN+ +  
Sbjct: 363 SKLATSRSQARYFIKSNAITINAHKQSKIEYIFQDSDRIYNLYTLLKRGKKNYCLIQ 419


>gi|269958403|ref|YP_003328190.1| tyrosyl-tRNA synthetase [Anaplasma centrale str. Israel]
 gi|269848232|gb|ACZ48876.1| tyrosyl-tRNA synthetase [Anaplasma centrale str. Israel]
          Length = 414

 Score =  431 bits (1109), Expect = e-119,   Method: Composition-based stats.
 Identities = 182/413 (44%), Positives = 264/413 (63%), Gaps = 5/413 (1%)

Query: 3   AFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
            +KS+FL +L  RG++HQ +    LD L +   +TAYIG+D TA SLH G L Q+M++ +
Sbjct: 2   EYKSEFLRVLQTRGYLHQCTEAAALDELMALRPITAYIGFDCTARSLHIGSLMQIMVMRY 61

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD 122
           LQK GHK + L+GGGT+ IGDPS +D++R M+   EI  N   I    ++  K+      
Sbjct: 62  LQKFGHKVVVLLGGGTTKIGDPSGKDKARAMLSEAEIAANKAGI---LATIEKFLHRDNG 118

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
            ++++N  WL  ++Y++ LREIGS FSVN ML  +SVRSRL R+QSLSFLEF+Y++LQ+Y
Sbjct: 119 VIVVDNAEWLGEVRYLEFLREIGSKFSVNAMLGLDSVRSRLDRDQSLSFLEFSYVLLQSY 178

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DFVEL + + C LQ+GG+DQWGNI+ GIDLG +L  P+L+ LT+ LL T++G KMGKT  
Sbjct: 179 DFVELHRRHKCVLQIGGADQWGNIVNGIDLGRKLGLPQLYGLTTHLLLTSTGEKMGKTAY 238

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKII 302
           GA+WL+  M  P N+WQY+RN+ D +V    +  T LPM+EI  +  LQG+ INEAKK++
Sbjct: 239 GAVWLDAAMFDPGNYWQYFRNVPDVEVGRLLRLFTELPMNEIAELENLQGEAINEAKKVL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFA 362
           ATE T + HG+  A  A  AA++ F+ +     +P   + K  +++G+ +  L+  AG  
Sbjct: 299 ATEATAICHGKSAALAAENAALQVFEHN-DDVGLPNFPLHKSLIAQGISVAKLLQLAGLE 357

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD-STGNIKLSFGKKNHIIC 414
            S +  RR +K    KIN  ++ +    +   DF  + G I +  GKK  I  
Sbjct: 358 ESISAGRRLIKGRGCKINGMVVEDADHALTQADFARNGGYITVFCGKKRRIKV 410


>gi|15640492|ref|NP_230119.1| tyrosyl-tRNA synthetase [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|121590714|ref|ZP_01678046.1| tyrosyl-tRNA synthetase [Vibrio cholerae 2740-80]
 gi|153819164|ref|ZP_01971831.1| tyrosyl-tRNA synthetase [Vibrio cholerae NCTC 8457]
 gi|153823181|ref|ZP_01975848.1| tyrosyl-tRNA synthetase [Vibrio cholerae B33]
 gi|227080675|ref|YP_002809226.1| tyrosyl-tRNA synthetase [Vibrio cholerae M66-2]
 gi|229507103|ref|ZP_04396609.1| tyrosyl-tRNA synthetase [Vibrio cholerae BX 330286]
 gi|229509061|ref|ZP_04398549.1| tyrosyl-tRNA synthetase [Vibrio cholerae B33]
 gi|229519729|ref|ZP_04409172.1| tyrosyl-tRNA synthetase [Vibrio cholerae RC9]
 gi|229606242|ref|YP_002876890.1| tyrosyl-tRNA synthetase [Vibrio cholerae MJ-1236]
 gi|254850696|ref|ZP_05240046.1| tyrosyl-tRNA synthetase [Vibrio cholerae MO10]
 gi|298501004|ref|ZP_07010805.1| tyrosyl-tRNA synthetase [Vibrio cholerae MAK 757]
 gi|9654891|gb|AAF93638.1| tyrosyl-tRNA synthetase [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|121547445|gb|EAX57554.1| tyrosyl-tRNA synthetase [Vibrio cholerae 2740-80]
 gi|126510309|gb|EAZ72903.1| tyrosyl-tRNA synthetase [Vibrio cholerae NCTC 8457]
 gi|126519307|gb|EAZ76530.1| tyrosyl-tRNA synthetase [Vibrio cholerae B33]
 gi|227008563|gb|ACP04775.1| tyrosyl-tRNA synthetase [Vibrio cholerae M66-2]
 gi|229344418|gb|EEO09393.1| tyrosyl-tRNA synthetase [Vibrio cholerae RC9]
 gi|229353986|gb|EEO18920.1| tyrosyl-tRNA synthetase [Vibrio cholerae B33]
 gi|229355848|gb|EEO20768.1| tyrosyl-tRNA synthetase [Vibrio cholerae BX 330286]
 gi|229368897|gb|ACQ59320.1| tyrosyl-tRNA synthetase [Vibrio cholerae MJ-1236]
 gi|254846401|gb|EET24815.1| tyrosyl-tRNA synthetase [Vibrio cholerae MO10]
 gi|297540252|gb|EFH76312.1| tyrosyl-tRNA synthetase [Vibrio cholerae MAK 757]
          Length = 434

 Score =  431 bits (1109), Expect = e-118,   Method: Composition-based stats.
 Identities = 148/426 (34%), Positives = 218/426 (51%), Gaps = 23/426 (5%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L +RG I Q +    L    +      Y G+D TA SLH GHL  L++L   Q  G
Sbjct: 14  LFDDLQQRGLIAQSTPLEALVERFAT-PQVLYCGFDPTAGSLHIGHLVPLLMLKRFQNAG 72

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM-L 126
           H+ I+L+GG T +IGDPSF+   R +  +Q +Q+ +  +    +  +        +LM +
Sbjct: 73  HQAIALIGGATGMIGDPSFKANERVLNSAQTVQQWVSDLSQQITQLMTSQGENCASLMAV 132

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDFV 185
           NN  W+  I  ID  R++G  FSVN M++ ESV+ RL R +Q +SF EF+Y +LQ+YDF 
Sbjct: 133 NNADWIGKINLIDFFRDVGKHFSVNAMINRESVKQRLARPDQGISFTEFSYSLLQSYDFA 192

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L + + C LQ+GG+DQWGNI+ GIDL  RL   ++  LT PL+T + GTK GKT SGA+
Sbjct: 193 HLNREFGCALQIGGNDQWGNIVSGIDLTRRLNGVEVCGLTLPLITKSDGTKFGKTESGAV 252

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIA 303
           WL    TSPY F+Q+W N DDADV  F    T L  +EI+ + +         +A++I+A
Sbjct: 253 WLESSKTSPYRFYQFWLNSDDADVYRFLAYYTFLSTAEIEEIRQADALRAGKPQAQQILA 312

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIH-----------SQHMPTISISKDEVSRGMGL 352
             +T  VHG E    A       F   +               +P ++ S+ +    + L
Sbjct: 313 EHVTRFVHGEEGLAAAQRITQALFSGDVSYLSLSELAQLELDGLPCVAASRTDSLLDLLL 372

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
            + +  +       +AR  L++ AI++N   +  E        FD      L  GKK   
Sbjct: 373 SSGLASS-----KRQAREWLENGAIRVNGERVQQEGGLSGFALFD--RYYVLQRGKKQFA 425

Query: 413 ICHLCG 418
           +  L G
Sbjct: 426 LIKLEG 431


>gi|60593980|pdb|1X8X|A Chain A, Tyrosyl T-Rna Synthetase From E.Coli Complexed With
           Tyrosine
          Length = 322

 Score =  431 bits (1108), Expect = e-118,   Method: Composition-based stats.
 Identities = 139/320 (43%), Positives = 198/320 (61%), Gaps = 5/320 (1%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 4   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +QE ++KI+   + F+ +  G+  A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDCGENSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDF 184
            NN  W  ++  +  LR+IG  FSVN+M++ E+V+ RL RE Q +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNREDQGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K Y   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 184 ACLNKQYGVVLQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI   +   K  GK    A+ +
Sbjct: 244 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINALEEEDKNSGKAPR-AQYV 302

Query: 302 IATEITTMVHGREEAEKAAT 321
           +A ++T +VHG E  + A  
Sbjct: 303 LAEQVTRLVHGEEGLQAAKR 322


>gi|229512527|ref|ZP_04401998.1| tyrosyl-tRNA synthetase [Vibrio cholerae TMA 21]
 gi|229350420|gb|EEO15369.1| tyrosyl-tRNA synthetase [Vibrio cholerae TMA 21]
          Length = 434

 Score =  430 bits (1107), Expect = e-118,   Method: Composition-based stats.
 Identities = 146/426 (34%), Positives = 217/426 (50%), Gaps = 23/426 (5%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L +RG I Q +    L    +      Y G+D TA SLH GHL  L++L   Q  G
Sbjct: 14  LFDDLQQRGLIAQSTPLEALVERFA-MPQVLYCGFDPTAGSLHIGHLVPLLMLKRFQNAG 72

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM-L 126
           H+ I+L+GG T +IGDPSF+   R +  +Q +Q+ +  +    +  +   +    +LM +
Sbjct: 73  HQAIALIGGATGMIGDPSFKANERVLNSAQTVQQWVSDLSQQITQLMASQSENCASLMTV 132

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDFV 185
           NN  W+  I  ID  R++G  FSVN M++ ESV+ RL R +Q +SF EF+Y +LQ+YDF 
Sbjct: 133 NNADWIGKINLIDFFRDVGKHFSVNTMINRESVKQRLARPDQGISFTEFSYSLLQSYDFA 192

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L + + C LQ+GG+DQWGNI+ GIDL  RL   ++  LT PL+T + GTK GKT SGA+
Sbjct: 193 HLNREFGCALQIGGNDQWGNIVSGIDLTRRLNGAEVCGLTLPLITKSDGTKFGKTESGAV 252

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIA 303
           WL    TSPY F+Q+W N DDADV  F    T L  +EI+ + +         +A++I+A
Sbjct: 253 WLESSKTSPYRFYQFWLNSDDADVYRFLAYYTFLSTAEIEEIRQADALRAGRPQAQQILA 312

Query: 304 TEITTMVHGREEAEKAATAAMECFDMS-----------IHSQHMPTISISKDEVSRGMGL 352
             +T  VHG E    A       F              +    +P ++ S  +    + L
Sbjct: 313 EHVTRFVHGEEGLAAAQRITQALFSGDLSYLSLSELSQLELDGLPCVAASSPDSLLDLLL 372

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
            + +  +       +AR  L++ AI++N   +  E   +            L  GKK   
Sbjct: 373 SSGLASS-----KRQAREWLENGAIRVNGERVQQEG--VLSGFALFDRYYVLQRGKKQFA 425

Query: 413 ICHLCG 418
           +  L G
Sbjct: 426 LIKLEG 431


>gi|153802596|ref|ZP_01957182.1| tyrosyl-tRNA synthetase [Vibrio cholerae MZO-3]
 gi|124121859|gb|EAY40602.1| tyrosyl-tRNA synthetase [Vibrio cholerae MZO-3]
          Length = 434

 Score =  430 bits (1107), Expect = e-118,   Method: Composition-based stats.
 Identities = 146/426 (34%), Positives = 217/426 (50%), Gaps = 23/426 (5%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L +RG I Q +    L    +      Y G+D TA SLH GHL  L++L   Q  G
Sbjct: 14  LFDDLQQRGLIAQSTPLEALVERFA-MPQVLYCGFDPTAGSLHIGHLVPLLMLKRFQNAG 72

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM-L 126
           H+ I+L+GG T +IGDPSF+   R +  +Q +Q+ +  +    +  +   +    +LM +
Sbjct: 73  HQAIALIGGATGMIGDPSFKANERVLNSAQTVQQWVSDLSQQITQLMASQSENCASLMTV 132

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDFV 185
           NN  W+  I  ID  R++G  FSVN M++ ESV+ RL R +Q +SF EF+Y +LQ+YDF 
Sbjct: 133 NNADWIGKINLIDFFRDVGKHFSVNTMINRESVKQRLARPDQGISFTEFSYSLLQSYDFA 192

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L + + C LQ+GG+DQWGNI+ GIDL  RL   ++  LT PL+T + GTK GKT SGA+
Sbjct: 193 HLNREFGCALQIGGNDQWGNIVSGIDLTRRLNGAEVCGLTLPLITKSDGTKFGKTESGAV 252

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIA 303
           WL    TSPY F+Q+W N DDADV  F    T L  +EI+ + +         +A++I+A
Sbjct: 253 WLESSKTSPYRFYQFWLNSDDADVYRFLAYYTFLSTAEIEEIRQADALRAGRPQAQQILA 312

Query: 304 TEITTMVHGREEAEKAATAAMECFDMS-----------IHSQHMPTISISKDEVSRGMGL 352
             +T  VHG E    A       F              +    +P ++ S  +    + L
Sbjct: 313 EHVTRFVHGEEGLAAAQRITQALFSGDLSYLSLSELSQLELDGLPCVAASSTDSLLDLLL 372

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
            + +  +       +AR  L++ AI++N   +  E   +            L  GKK   
Sbjct: 373 SSGLASS-----KRQAREWLENGAIRVNGERVQQEG--VLSGFALFDRYYVLQRGKKQFA 425

Query: 413 ICHLCG 418
           +  L G
Sbjct: 426 LIKLEG 431


>gi|56417206|ref|YP_154280.1| tyrosyl-tRNA synthetase [Anaplasma marginale str. St. Maries]
 gi|81358833|sp|Q5P9K5|SYY_ANAMM RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|56388438|gb|AAV87025.1| tyrosyl-tRNA synthetase [Anaplasma marginale str. St. Maries]
          Length = 414

 Score =  430 bits (1106), Expect = e-118,   Method: Composition-based stats.
 Identities = 185/415 (44%), Positives = 266/415 (64%), Gaps = 5/415 (1%)

Query: 3   AFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
            FKS FL+ L  RG++HQ ++   LD L +   +TAYIG+D TA SLH G L Q+M++ +
Sbjct: 2   EFKSGFLNTLQVRGYLHQCTDDVALDELMALQPITAYIGFDCTARSLHIGSLMQIMVMRY 61

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD 122
           LQK GHK + L+GGGT+ IGDPS +D++R M+   EI  N   I    + F+  G G   
Sbjct: 62  LQKFGHKIVVLLGGGTTKIGDPSGKDKARAMLSEAEIAANKAGILATINKFLNQGDG--- 118

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
            ++ +N  WL  ++Y++ LREIGS FSVN ML  +SVRSRL R+Q+LSFLEF+Y++LQ+Y
Sbjct: 119 VVIADNAEWLGEVRYLEFLREIGSKFSVNAMLGLDSVRSRLDRDQNLSFLEFSYVLLQSY 178

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DFVEL + + C LQ+GG+DQWGNI+ GIDLG +L  P+L+ LT+ LL T++G KMGKT  
Sbjct: 179 DFVELHRRHKCVLQIGGADQWGNIVNGIDLGRKLGLPQLYGLTTHLLLTSTGEKMGKTAD 238

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKII 302
           GA+WL+ EM  P N+WQY+RN+ D +V    +  T LPM+EI  +  LQG+ INEAKK++
Sbjct: 239 GAVWLDAEMFDPGNYWQYFRNVADVEVGRLLRLFTELPMNEIAELENLQGEAINEAKKVL 298

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFA 362
           ATE T + HG+  A  A  AA++ F+ +  +  +P   + K  +++G+ +  L+  AG  
Sbjct: 299 ATEATAICHGKSAALAAENAALQVFEHNDDA-GLPHFPLHKSLIAQGISVAKLLQLAGLE 357

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDST-GNIKLSFGKKNHIICHL 416
            S +  RR +K    KIN  ++ +    +   DF    G I +  GKK  I   +
Sbjct: 358 ESISAGRRLIKGRGCKINGMVVEDADHALTHADFARNSGYITVFCGKKRRIKVVV 412


>gi|262091699|gb|ACY25289.1| tyrosyl-tRNA synthetase [uncultured actinobacterium]
          Length = 427

 Score =  430 bits (1106), Expect = e-118,   Method: Composition-based stats.
 Identities = 145/424 (34%), Positives = 233/424 (54%), Gaps = 17/424 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D ++  + RG IH  ++  EL    +   ++AY+G+D T+ SLH G+L   + L  LQ  
Sbjct: 9   DVVAEFAARGLIHDSTDREELSKRTTSSQISAYVGFDPTSDSLHVGNLLGQISLRRLQLL 68

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI L GG T ++GDPS + E R ++ ++++  N++ IK      + + +G   AL++
Sbjct: 69  GHRPIVLAGGATGMVGDPSGKSEERNLLDAEQLAHNVQSIKRQLECILDF-SGPNAALLV 127

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           +N  W  + K +D LR++G   +VN+M++ +SV+SR+     LS+ EF+YM+LQA DF  
Sbjct: 128 DNADWTKNAKMLDFLRDVGKHITVNQMMAKDSVKSRISDGNGLSYTEFSYMLLQANDFRY 187

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L +++ C +QMGGSDQWGNI  G DL  +      + LT PL+T A GTK GKT  GA+W
Sbjct: 188 LCEHHQCEMQMGGSDQWGNITAGTDLIRKTLGRSAYGLTWPLITKADGTKFGKTADGAVW 247

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIAT 304
           L+   TSPY F Q+W  I DAD+     + +   M+EI  +   Q +      A++ +A 
Sbjct: 248 LDARRTSPYQFRQFWMQIADADIEHMLPKFSLRSMNEIAEILADQKRTPESRVAQRTLAR 307

Query: 305 EITTMVHGREEAEKAATAAMECFD----------MSIHSQHMPTISISKDEVSRGMGLLT 354
           E+T M+HG E A+ A  AA   F           + + +  + + SI    +S  +G+  
Sbjct: 308 ELTVMLHGEEAADAAEQAADVLFGAHPVSASPAALHLIASEVASSSIGAAALSDAVGI-- 365

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +V  G A+S +EARR L   +++ N   + +E  ++          + L  GK  + + 
Sbjct: 366 -LVTTGLASSNSEARRLLSQRSVRANGEQM-DEHAKLDKIPLLHGRWLLLRKGKTAYHLL 423

Query: 415 HLCG 418
            L G
Sbjct: 424 DLQG 427


>gi|332675822|gb|AEE72638.1| tyrosine--tRNA ligase [Propionibacterium acnes 266]
          Length = 418

 Score =  430 bits (1105), Expect = e-118,   Method: Composition-based stats.
 Identities = 144/414 (34%), Positives = 217/414 (52%), Gaps = 14/414 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           SD L  L  RG +   ++   L+   +QG VT Y+G+D TA SLH GHL QLML+  LQ+
Sbjct: 2   SDLLDDLEWRGLVADSTDREALEAHLAQGPVTFYVGFDPTAKSLHIGHLVQLMLVRALQE 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP+ L+GG T +IGDP    E R M   + + E +E IK   S ++    G+  A +
Sbjct: 62  RGHKPLLLVGGATGLIGDPKMTGE-RHMNDREVVAEWVESIKDQVSKYVD-TDGRNAAQI 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  W      +DLLR++G  FSVNRML+ + V  RL+    +S+ EF+Y++LQ+ DF 
Sbjct: 120 VNNYDWTVKYTALDLLRDVGKHFSVNRMLARDVVARRLES--GISYTEFSYVLLQSLDFC 177

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           EL K Y C LQ G  DQWGNI  G +   +     +  L +PL+T A GTK GKT SG +
Sbjct: 178 ELHKRYGCTLQTGAQDQWGNITAGAEFIRKTTGDVVHGLVTPLITKADGTKYGKTESGTV 237

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIA 303
           W++ E+TS Y F Q++ N +D+ V+ + K  +     EI+ +A+   +E     A+  +A
Sbjct: 238 WVDPELTSAYAFHQFFLNAEDSKVIEYLKIFSPRSREEIEDLARKTEEEPWRRAAQHCLA 297

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKD--------EVSRGMGLLTL 355
            ++T +VHG E+ + A  AA   F             +S          E      ++  
Sbjct: 298 DDLTDLVHGVEQRKAAEAAAQAIFGRGELRDLDERTVLSLSDELGAAHHEGGEYPTVVGA 357

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
           +V AG   + +  RR +      +NN  +++   ++   DF       +  GKK
Sbjct: 358 MVAAGVVDTKSAGRRAVAEGGAYLNNVKVADPDQRLTDDDFLCGRVALVRRGKK 411


>gi|282854550|ref|ZP_06263885.1| tyrosine--tRNA ligase [Propionibacterium acnes J139]
 gi|289426416|ref|ZP_06428159.1| tyrosine--tRNA ligase [Propionibacterium acnes SK187]
 gi|289427762|ref|ZP_06429473.1| tyrosine--tRNA ligase [Propionibacterium acnes J165]
 gi|295130942|ref|YP_003581605.1| tyrosine--tRNA ligase [Propionibacterium acnes SK137]
 gi|282582132|gb|EFB87514.1| tyrosine--tRNA ligase [Propionibacterium acnes J139]
 gi|289153144|gb|EFD01862.1| tyrosine--tRNA ligase [Propionibacterium acnes SK187]
 gi|289159026|gb|EFD07219.1| tyrosine--tRNA ligase [Propionibacterium acnes J165]
 gi|291377292|gb|ADE01147.1| tyrosine--tRNA ligase [Propionibacterium acnes SK137]
          Length = 418

 Score =  429 bits (1104), Expect = e-118,   Method: Composition-based stats.
 Identities = 144/414 (34%), Positives = 217/414 (52%), Gaps = 14/414 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           SD L  L  RG +   ++   L+   +QG VT Y+G+D TA SLH GHL QLML+  LQ+
Sbjct: 2   SDLLDDLEWRGLVADSTDREALEAHLAQGPVTFYVGFDPTAKSLHIGHLVQLMLVRALQE 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP+ L+GG T +IGDP    E R M   + + E +E IK   S ++    G+  A +
Sbjct: 62  RGHKPLLLVGGATGLIGDPKMTGE-RHMNDREVVAEWVESIKDQVSKYVD-TDGRNAAQI 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  W      +DLLR++G  FSVNRML+ + V  RL+    +S+ EF+Y++LQ+ DF 
Sbjct: 120 VNNYDWTVKYTALDLLRDVGKHFSVNRMLARDVVARRLES--GISYTEFSYVLLQSLDFY 177

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           EL K Y C LQ G  DQWGNI  G +   +     +  L +PL+T A GTK GKT SG +
Sbjct: 178 ELHKRYGCTLQTGAQDQWGNITAGAEFIRKTTGDVVHGLVTPLITKADGTKYGKTESGTV 237

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIA 303
           W++ E+TS Y F Q++ N +D+ V+ + K  +     EI+ +A+   +E     A+  +A
Sbjct: 238 WVDPELTSAYAFHQFFLNAEDSKVIEYLKIFSPRSREEIEDLARKTEEEPWRRAAQHCLA 297

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKD--------EVSRGMGLLTL 355
            ++T +VHG E+ + A  AA   F             +S          E      ++  
Sbjct: 298 DDLTDLVHGVEQRKAAEAAAQAIFGRGELRDLDERTVLSLSDELGAAHHEGGEYPTVVGA 357

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
           +V AG   + +  RR +      +NN  +++   ++   DF       +  GKK
Sbjct: 358 MVAAGVVDTKSAGRRAVAEGGAYLNNVKVADPDQRLTDDDFLCGRVALVRRGKK 411


>gi|60593714|pdb|1VBM|A Chain A, Crystal Structure Of The Escherichia Coli Tyrosyl-Trna
           Synthetase Complexed With Tyr-Ams
 gi|60593715|pdb|1VBM|B Chain B, Crystal Structure Of The Escherichia Coli Tyrosyl-Trna
           Synthetase Complexed With Tyr-Ams
          Length = 318

 Score =  429 bits (1103), Expect = e-118,   Method: Composition-based stats.
 Identities = 138/319 (43%), Positives = 197/319 (61%), Gaps = 5/319 (1%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+ 
Sbjct: 1   NLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQA 60

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP++L+GG T +IGDPSF+   R++   + +QE ++KI+   + F+ +  G+  A+  
Sbjct: 61  GHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDCGENSAIAA 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDFV 185
           NN  W  ++  +  LR+IG  FSVN+M++ E+V+ RL RE Q +SF EF+Y +LQ YDF 
Sbjct: 121 NNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNREDQGISFTEFSYNLLQGYDFA 180

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L K Y   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA+
Sbjct: 181 CLNKQYGVVLQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGAV 240

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKII 302
           WL+ + TSPY F+Q+W N  DADV  F K  T + + EI   +   K  GK    A+ ++
Sbjct: 241 WLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINALEEEDKNSGKAPR-AQYVL 299

Query: 303 ATEITTMVHGREEAEKAAT 321
           A ++T +VHG E  + A  
Sbjct: 300 AEQVTRLVHGEEGLQAAKR 318


>gi|319760503|ref|YP_004124441.1| tyrosyl-tRNA synthetase [Candidatus Blochmannia vafer str. BVAF]
 gi|318039217|gb|ADV33767.1| tyrosyl-tRNA synthetase [Candidatus Blochmannia vafer str. BVAF]
          Length = 432

 Score =  428 bits (1101), Expect = e-118,   Method: Composition-based stats.
 Identities = 163/425 (38%), Positives = 235/425 (55%), Gaps = 21/425 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D ++ L ERGFI QI+N   L+ +     +T Y G+D T+ SLH GHL  L+ L   QK 
Sbjct: 11  DVINYLYERGFIAQITNKNILNSILQSKSITLYCGFDPTSDSLHIGHLVPLLCLKKFQKF 70

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG--KTDAL 124
           GHKPI L+GG T +IGDPSF+D  R++     IQ+ IEKIK   SSFI   +     +  
Sbjct: 71  GHKPIILLGGATGLIGDPSFKDSERQLNPMNTIQQWIEKIKSQISSFIDLNSKNHPHNIH 130

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYD 183
           ++NN TW  S   +  LR+IG FFS+N+M++ + ++ RLK +   +S+ EF+Y ++Q+YD
Sbjct: 131 IVNNYTWFSSTNILTFLRDIGKFFSINKMINKDFIKKRLKEDNCGISYTEFSYNLMQSYD 190

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F  L KNY   LQ+GGSDQWGNII GIDL  R+   K + +T PLLTT +  K GKT   
Sbjct: 191 FFYLYKNYGVILQIGGSDQWGNIISGIDLIRRIYNKKTYGITVPLLTTINNIKFGKTEKN 250

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE--INEAKKI 301
            IW++   TSPY F+QYW NIDD  V SF K  T + + +I+ + K       I   K  
Sbjct: 251 TIWIDPNKTSPYKFYQYWLNIDDKQVCSFLKIFTDMNIEQINFLEKKMNNNYFIPITKTT 310

Query: 302 IATEITTMVHGREEAEKAATAAMECFD-----------MSIHSQHMPTISISKDEVSRGM 350
           +A +IT ++HG++  + A       F              +    +P+I + KD     +
Sbjct: 311 LAEKITKLIHGKQGLKSAQRITKNIFYDHPLDLTLEDFNQLAKDGIPSIILKKD-----I 365

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            L   +V++  ATS ++AR  ++S+AI IN     N++      D        L  GKK+
Sbjct: 366 TLQQALVESKLATSKSQARYFIESHAITINKIKQLNKQYIFNNTDRLFNSYTLLKKGKKH 425

Query: 411 HIICH 415
             +  
Sbjct: 426 SCLIQ 430


>gi|90020735|ref|YP_526562.1| tyrosyl-tRNA synthetase [Saccharophagus degradans 2-40]
 gi|89950335|gb|ABD80350.1| tyrosyl-tRNA synthetase [Saccharophagus degradans 2-40]
          Length = 434

 Score =  428 bits (1100), Expect = e-118,   Method: Composition-based stats.
 Identities = 157/435 (36%), Positives = 228/435 (52%), Gaps = 19/435 (4%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M    +  L+ L  RG I Q++   +L    S    T Y G+D TA SLH G L  L+ L
Sbjct: 1   MSGVDTGLLADLEARGLIAQMTGDDQLAEHLSTSR-TLYCGFDPTADSLHIGSLVPLLTL 59

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GHKP++L+GG T +IGDPSF+ + R++     +   ++K+K   S FI + +G+
Sbjct: 60  KRFQMAGHKPLALVGGATGLIGDPSFKAQERKLNTPDIVAGWVDKLKAQVSQFIDFDSGE 119

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMIL 179
             A ++NN  W+ S+  +D LR++G  FS+N M+  ESV+ R+ RE   +SF EF YMIL
Sbjct: 120 NVAEVVNNLDWIGSVNVLDFLRDVGKHFSINNMIQKESVKQRIDREGAGISFTEFTYMIL 179

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK 239
           Q+YDF EL K  +C LQ+GGSDQWGNI  GIDL  R+ + + F LT PL+T + GTK GK
Sbjct: 180 QSYDFAELYKQNNCTLQIGGSDQWGNITGGIDLARRMYSGQTFGLTLPLVTKSDGTKFGK 239

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NE 297
           T SG IWL+   TSPY F+Q+W N  DADV  F +  T L   EID +           +
Sbjct: 240 TESGTIWLDPSKTSPYAFYQFWLNSADADVYKFLRYFTFLTPKEIDDIEAADAAAQGRPQ 299

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSRG-- 349
           A+ I+A E+T +VHG E    A       F+ ++        + +    +   ++  G  
Sbjct: 300 AQGILAKEVTRLVHGEEGLVAAERITACMFNGTLADLSETDLEQLKLDGLPASDLDVGAI 359

Query: 350 --MGLLTLIVKAGFATSTNEARRHLKSNAIKINNS-IISNEKLQ----IKLQDFDSTGNI 402
               L TL+   G A +  E +  L  NA+ IN     +   +Q       +        
Sbjct: 360 GDTPLTTLLTDCGMAKAGREVKDALGRNAVLINGEAKGAEHNMQAAECFAKEHALFGRFF 419

Query: 403 KLSFGKKNHIICHLC 417
            +  GKK + +  + 
Sbjct: 420 LVKLGKKKNHLFEIV 434


>gi|297182713|gb|ADI18869.1| tyrosyl-tRNA synthetase [uncultured Pseudomonadales bacterium
           HF0010_05E14]
          Length = 433

 Score =  428 bits (1100), Expect = e-117,   Method: Composition-based stats.
 Identities = 156/435 (35%), Positives = 232/435 (53%), Gaps = 22/435 (5%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M      F+S L  RG I+Q S   +L+   +    T Y G+D TA SLH GHL  L++L
Sbjct: 1   MEINGKKFISSLESRGLIYQKSGSDDLEEHLNSER-TVYCGFDPTADSLHLGHLVPLLML 59

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GHKPI+L+GG T +IGDPSF+   R++  ++ +++   KI     + I     K
Sbjct: 60  KRFQLAGHKPIALVGGATGLIGDPSFKATERKLHSAEIVEQWALKITSQIENLINVDELK 119

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMIL 179
           +   ++NN +WL  IK +D LR+IG +FS+N +++ ESV+ R++RE + +S+ EF+Y ++
Sbjct: 120 S-VSIINNASWLSEIKMLDFLRDIGKYFSINNLIAKESVKKRIEREGEGISYTEFSYSLV 178

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK 239
           QA DF +L K  DC +Q+GGSDQWGNI+ GI+L  R    + F +T PL+T + GTK GK
Sbjct: 179 QALDFAQLYKQVDCTIQVGGSDQWGNIVSGIELNRRESKTQCFGITVPLITKSDGTKFGK 238

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE-- 297
           T SG++WL+ + TSPY F+Q+W  ++D DV  F    T L    I ++        N+  
Sbjct: 239 TESGSVWLDSKKTSPYMFYQFWLRVEDEDVYKFLNFFTFLSEEYIQQVKINDESSKNKPI 298

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS-----------QHMPTISISKDEV 346
           A+ I+A E+T  VHG+E  + A       F  S  +             +P + +   + 
Sbjct: 299 AQSILAEEVTRFVHGQEHLDAAKRITNALFSNSAENLLQGDFKQLALDGLPHVILGDAD- 357

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIIS-----NEKLQIKLQDFDSTGN 401
              + L  LIV AG   S  E +  LK  AI IN  I+S     N               
Sbjct: 358 KSSLSLSKLIVDAGITKSGREVKDALKRGAISINGKIVSPEDGFNMDSLFAKDHSQYDNY 417

Query: 402 IKLSFGKKNHIICHL 416
             +  GKK H++  L
Sbjct: 418 FLIKVGKKKHLLVSL 432


>gi|27904618|ref|NP_777744.1| tyrosyl-tRNA synthetase [Buchnera aphidicola str. Bp (Baizongia
           pistaciae)]
 gi|34098363|sp|Q89AW3|SYY_BUCBP RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|27904015|gb|AAO26849.1| tyrosyl-tRNA synthetase [Buchnera aphidicola str. Bp (Baizongia
           pistaciae)]
          Length = 424

 Score =  428 bits (1100), Expect = e-117,   Method: Composition-based stats.
 Identities = 158/415 (38%), Positives = 229/415 (55%), Gaps = 8/415 (1%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            +    +R  I QI+N  +L  +     ++ Y G+D+TA SLH GH+  L+ L   Q  G
Sbjct: 6   LIQEFQDRNLISQITNEIDLKNILLHNKISLYCGFDITADSLHVGHILPLLCLRRFQNLG 65

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+P+ LMGGGTS+IGDPSF+   R++   + +    +KI    S F+K+  GK +AL+++
Sbjct: 66  HRPVILMGGGTSLIGDPSFKLLERQLNSIELVHTWKQKITKQLSLFLKFNVGKNNALIVD 125

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDFVE 186
           N  W  +I  +  LR+IG  FS+N+M+  ++++ R+KR +Q +SF EF+Y +LQAYDF  
Sbjct: 126 NYEWFKNINVLTFLRDIGKHFSINQMIVRDAIQRRIKRLDQGISFTEFSYNLLQAYDFYF 185

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L K  D  LQ+GGSDQWGNII GIDL  RL   + + +T PLLT   G K GKT    IW
Sbjct: 186 LNKQLDVILQIGGSDQWGNIISGIDLIRRLHKKRAYGITVPLLTKKDGRKFGKTELDTIW 245

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK-EINEAKKIIATE 305
           L+K  TSPY F+QYW NI D+D+ SF K  T L +SEI  +       E+N  KKI+A  
Sbjct: 246 LDKMKTSPYKFYQYWMNISDSDIYSFLKMFTFLSLSEIKALKDTTKPTELNSVKKILAEY 305

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQ------HMPTISISKDEVSRGMGLLTLIVKA 359
           +T +VHG  E           F              +    +   ++     L  L+V +
Sbjct: 306 LTNLVHGSNEVRAIQRITSSLFSGKFSEMKETDFFQLEQDGMPSVQLYNSGNLQQLLVYS 365

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
             A S + A+  + SN+++INN I +N    +  +D        LS GKKN  + 
Sbjct: 366 RLALSRSHAKSMIVSNSVRINNIIQNNPFYILCNRDKMYHKYTLLSRGKKNFCLL 420


>gi|256372390|ref|YP_003110214.1| tyrosyl-tRNA synthetase [Acidimicrobium ferrooxidans DSM 10331]
 gi|256008974|gb|ACU54541.1| tyrosyl-tRNA synthetase [Acidimicrobium ferrooxidans DSM 10331]
          Length = 411

 Score =  427 bits (1099), Expect = e-117,   Method: Composition-based stats.
 Identities = 144/409 (35%), Positives = 217/409 (53%), Gaps = 8/409 (1%)

Query: 10  SILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
             L  RG +   S P  L+ L   G    YIG+D TA SLH G+L  ++L   L   GH+
Sbjct: 5   EELRWRGAVQDASAP--LEQLLDAGPRVFYIGFDPTADSLHVGNLLGIVLARRLIDAGHR 62

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
            I + GG T +IGDPS R   R ++    ++ N  +I G     +          + +N 
Sbjct: 63  AILVAGGATGMIGDPSGRSSERVLLDPATLRHNTARIAGQLQRLLG-DVVPGAVTLEDNR 121

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
           TWL  +  I  LR+IG    V+ ML+ ES+R+RL   + LSF EF+YMILQA DFVEL +
Sbjct: 122 TWLEPLTLIGFLRDIGKHVPVSAMLARESIRTRL-GGEGLSFTEFSYMILQAVDFVELHR 180

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
            Y C LQ+GGSDQWGNI  GIDL  RL   ++  LT PL+T A GTK GK++ G +WL++
Sbjct: 181 RYGCTLQLGGSDQWGNIAAGIDLVRRLDGHEVHGLTWPLVTKADGTKFGKSMGGNVWLDE 240

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIATEIT 307
           + TSPY  +Q++   +D  V+ +    T L   EI  +      +     A + +A E+ 
Sbjct: 241 DRTSPYELYQFFVRAEDQKVMEYVALYTFLSFDEIAALRTAHEDDPSRRIAHRRLAWEVV 300

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
             VHG   A++AA AA   F+        P +++ +     G+ ++ L + AG A S +E
Sbjct: 301 RFVHGEAAADQAAEAARALFEGGRAEAGAPVVTLERAAFGDGIDVIDLALAAGLARSRSE 360

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           ARR +    + ++    + E  ++   D  + G++ L  GK++ ++  L
Sbjct: 361 ARRLIAQGGLYVDGRR-ALEGQRVSQADL-TDGHLTLRRGKRDWVVVRL 407


>gi|315018872|gb|ADT70675.1| TyrS [Enterococcus faecium]
          Length = 383

 Score =  427 bits (1098), Expect = e-117,   Method: Composition-based stats.
 Identities = 141/390 (36%), Positives = 205/390 (52%), Gaps = 23/390 (5%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G D T  S+H GHL   M++   Q  GH P  L+GGGT  IGDPS R   R +   +++Q
Sbjct: 1   GVDPTGDSMHIGHLIPFMMMKRFQLAGHHPYILIGGGTGTIGDPSGRKTERVLQTMEQVQ 60

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
            N++ +        K      +   +NN  WL  I  ++ LR+ G  F++N ML+ + V 
Sbjct: 61  HNVDALSNQMR---KLFGKDANITFVNNYDWLSKISLLEFLRDYGKNFNINTMLAKDIVA 117

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
           SRL  E  +SF EF Y ILQ+ DF+ L K YD +LQ+GG+DQWGNI  G+DL  +L+ P+
Sbjct: 118 SRL--EVGISFTEFTYQILQSIDFLHLHKTYDVQLQIGGADQWGNITAGLDLIRKLEGPE 175

Query: 221 L--FALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
              F LT PL+  A GTK GKT  GA+WL+ + TSP+ F+Q+W N DD DVV + K  T 
Sbjct: 176 AEAFGLTIPLMLKADGTKFGKTAGGAVWLDPKKTSPFEFYQFWLNQDDRDVVKYLKFFTF 235

Query: 279 LPMSEIDRMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQH- 335
           L   EI+ +AK      E  EA++ +A E+T  VH  E+ ++A       F  +I   + 
Sbjct: 236 LSQEEIEDLAKKVETEPEKREAQRRLAEEVTRFVHSEEDLKEAQKITQALFSGNIKELNA 295

Query: 336 ---------MPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISN 386
                    MP + IS    S    ++ L+V      S  +AR  + + AI IN   +++
Sbjct: 296 EEIAQGFGKMPNVEIS----STPENIVELLVSTKIEPSKRQAREDVSNGAISINGDRVTD 351

Query: 387 EKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
               I   D      + +  GKKN+ +  +
Sbjct: 352 LNFVINPSDEFDGKFVVIRKGKKNYFLAKV 381


>gi|330993145|ref|ZP_08317083.1| Tyrosyl-tRNA synthetase [Gluconacetobacter sp. SXCC-1]
 gi|329759915|gb|EGG76421.1| Tyrosyl-tRNA synthetase [Gluconacetobacter sp. SXCC-1]
          Length = 367

 Score =  427 bits (1098), Expect = e-117,   Method: Composition-based stats.
 Identities = 179/365 (49%), Positives = 250/365 (68%), Gaps = 2/365 (0%)

Query: 52  GHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFS 111
           G L Q+MLL  + + GH+P++LMGGGT+ IGDPSFR+E+RR+M ++ I  N+  ++G   
Sbjct: 2   GSLIQIMLLRLMHRHGHRPVALMGGGTARIGDPSFREEARRLMTAETIATNLRGVEGCLR 61

Query: 112 SFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSF 171
            F+  GTG +D L+ NN  WL  + YIDLLR++G  FSVNRMLSF+SVRSRL+REQ L+F
Sbjct: 62  QFLPLGTGPSDPLLANNADWLDRLSYIDLLRDVGIHFSVNRMLSFDSVRSRLEREQGLTF 121

Query: 172 LEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT 231
           LEFNY ILQ+YDF EL   +   LQMGGSDQWGNI+ GIDL  R+   ++F LT+PLLTT
Sbjct: 122 LEFNYSILQSYDFRELNLRHGVTLQMGGSDQWGNIVSGIDLVRRMNGAQVFGLTTPLLTT 181

Query: 232 ASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ 291
           +SG KMGKT  GA+WL+      +++WQ+WRN++DADV  F +  T LP++E DR+A L 
Sbjct: 182 SSGAKMGKTAQGAVWLSAARLPVFDYWQFWRNVEDADVGRFLRLFTELPLAECDRLAALG 241

Query: 292 GKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIH-SQHMPTISISKDEVSRGM 350
           G EINEAKK++ATE T++ HGR  A++AA AA   F+     +  +PT+ +    ++ G+
Sbjct: 242 GAEINEAKKVLATEATSLCHGRAAAQEAADAARRTFEEGAVTAAALPTVQVPAALLAEGV 301

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
               L V+AGFA S  EARR ++    ++N+ ++ +E   +   D    G +KLS G+K 
Sbjct: 302 PAFRLFVEAGFAASNGEARRLIRGGGARVNDVVVGDEAQVVSTADLI-DGALKLSSGRKR 360

Query: 411 HIICH 415
           HI+  
Sbjct: 361 HILVQ 365


>gi|83319274|ref|YP_424607.1| tyrosyl-tRNA synthetase [Mycoplasma capricolum subsp. capricolum
           ATCC 27343]
 gi|97201592|sp|Q2SRK6|SYY_MYCCT RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|83283160|gb|ABC01092.1| tyrosyl-tRNA synthetase [Mycoplasma capricolum subsp. capricolum
           ATCC 27343]
          Length = 414

 Score =  427 bits (1098), Expect = e-117,   Method: Composition-based stats.
 Identities = 150/422 (35%), Positives = 224/422 (53%), Gaps = 18/422 (4%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
            K++ L  L  RG I Q++N +++    +      Y G+D TA SLH GHL  ++ L   
Sbjct: 1   MKNNILEELKWRGLIKQVTNEQKILDAQNSND-AVYCGFDPTADSLHVGHLMMIITLKRF 59

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
              G KPI+L+GG T +IGDPSF+   R +   Q++  NI KI       I         
Sbjct: 60  ALQGFKPIALIGGATGMIGDPSFKASERVLQTKQQVDHNINKISTQLKEII------PTV 113

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
             +NN  WL  I  ID LR+IG  F+++ +L+ ES+ +R+  +  LS  EF Y +LQA+D
Sbjct: 114 SFVNNRDWLEDISLIDFLRDIGKHFNLSYLLAKESIATRI--QTGLSVTEFCYTMLQAFD 171

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERL--KTPKLFALTSPLLTTASGTKMGKTL 241
           F  L KN DC +Q+GGSDQWGNI  GID       K  K   +T  LLT + G K GKT 
Sbjct: 172 FYYLYKNNDCSVQIGGSDQWGNITSGIDFISDTINKNNKASGVTINLLTKSDGQKFGKTE 231

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAK 299
           SGA+WL+K  TS Y F+Q+W N  D D ++  K LT L   +I+++ K   ++   +  +
Sbjct: 232 SGAVWLDKTKTSEYEFYQFWFNQTDEDSINLLKCLTFLTKDQIEQLIKQHNQQPAKHFLQ 291

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQ-----HMPTISISKDEVSRGMGLLT 354
           K +A+E+T  VH ++  +KA       F   + S       M   S+   ++++   ++ 
Sbjct: 292 KALASEMTKFVHQQQGLDKALKLTEAFFSGDLFSLTDDLFKMALNSLPNTQINKDTKVID 351

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +V+   A+S  EAR  LK+ AI INN +I +E L I   D      + +  GKK + + 
Sbjct: 352 ALVELKVASSKREAREFLKNKAILINNQVIEDENLVISSFDLIQNKYLLVKKGKKKYFVI 411

Query: 415 HL 416
            +
Sbjct: 412 LV 413


>gi|153826579|ref|ZP_01979246.1| tyrosyl-tRNA synthetase [Vibrio cholerae MZO-2]
 gi|149739671|gb|EDM53885.1| tyrosyl-tRNA synthetase [Vibrio cholerae MZO-2]
          Length = 434

 Score =  427 bits (1098), Expect = e-117,   Method: Composition-based stats.
 Identities = 147/426 (34%), Positives = 217/426 (50%), Gaps = 23/426 (5%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L +RG I Q +    L           Y G+D TA SLH GHL  L++L   Q  G
Sbjct: 14  LFDDLQQRGLIAQSTPLEALVERFVT-PQVLYCGFDPTAGSLHIGHLVPLLMLKRFQNAG 72

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM-L 126
           H+ I+L+GG T +IGDPSF+   R +  +Q +Q+ +  +    +  +   +    +LM +
Sbjct: 73  HQAIALIGGATGMIGDPSFKANERVLNSAQTVQQWVSDLSQQITQLMASQSENCASLMTV 132

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDFV 185
           NN  W+  I  ID   ++G  FSVN M++ ESV+ RL R +Q +SF EF+Y +LQ+YDF 
Sbjct: 133 NNADWIGKINLIDFFHDVGKHFSVNAMINRESVKQRLARPDQGISFTEFSYSLLQSYDFA 192

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L + + C LQ+GG+DQWGNI+ GIDL  RL   ++  LT PL+T + GTK GKT SGA+
Sbjct: 193 HLNREFGCALQIGGNDQWGNIVSGIDLTRRLNGVEVCGLTLPLITKSDGTKFGKTESGAV 252

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIA 303
           WL    TSPY F+Q+W N DDADV  F    T L  +EI+ + +         +A++I+A
Sbjct: 253 WLESRKTSPYRFYQFWLNSDDADVYRFLAYYTFLSTAEIEEIRQADALRAGKPQAQQILA 312

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIH-----------SQHMPTISISKDEVSRGMGL 352
             +T  VHG E    A       F   +               +P ++ S+ +    + L
Sbjct: 313 EHVTRFVHGEEGLAAALRITQALFSGDVSYLSLSELAQLELDGLPCVAASRTDSLLDLLL 372

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
            + +  +       +AR  L++ AI++N   +  E        FD      L  GKK   
Sbjct: 373 SSGLASS-----KRQAREWLENGAIRVNGERVQQEGGLSGFALFD--RYYVLQRGKKQFA 425

Query: 413 ICHLCG 418
           +  L G
Sbjct: 426 LIKLEG 431


>gi|50842886|ref|YP_056113.1| tyrosyl-tRNA synthetase [Propionibacterium acnes KPA171202]
 gi|81611507|sp|Q6A7W0|SYY_PROAC RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|50840488|gb|AAT83155.1| tyrosyl-tRNA synthetase [Propionibacterium acnes KPA171202]
          Length = 418

 Score =  426 bits (1096), Expect = e-117,   Method: Composition-based stats.
 Identities = 144/414 (34%), Positives = 217/414 (52%), Gaps = 14/414 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           SD L  L  RG +   ++   L+   +QG VT Y+G+D TA SLH GHL QLML+  LQ+
Sbjct: 2   SDLLDDLEWRGLVADSTDREALEAHLAQGPVTFYVGFDPTAKSLHIGHLVQLMLVRALQE 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP+ L+GG T +IGDP    E R M   + + E +E IK   S ++    G+  A +
Sbjct: 62  RGHKPLLLVGGATGLIGDPKMTGE-RHMNDREVVAEWVESIKDQVSKYVD-TDGRNAAQI 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  W      +DLLR++G  FSVNRML+ + V  RL+    +S+ EF+Y++LQ+ DF 
Sbjct: 120 VNNYDWTVKYTALDLLRDVGKHFSVNRMLARDVVARRLES--GISYTEFSYVLLQSLDFY 177

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           EL K Y C LQ G  DQWGNI  G +   +     +  L +PL+T A GTK GKT SG +
Sbjct: 178 ELHKRYGCTLQTGAQDQWGNITAGAEFIRKTTGDVVHGLVTPLITKADGTKYGKTESGTV 237

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIA 303
           W++ E+TS Y F Q++ N +D+ V+ + K  +     EI+ +A+   +E     A+  +A
Sbjct: 238 WVDPELTSAYAFHQFFLNAEDSKVIEYLKIFSPRSREEIEDLARKTEEEPWRRAAQHCLA 297

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKD--------EVSRGMGLLTL 355
            ++T +VHG E+ + A  AA   F             +S          E      ++  
Sbjct: 298 DDLTDLVHGVEQRKAAEAAAQAIFGRGELRDLDERTVLSLSDELGAAHHEGGEYPTVVGA 357

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
           +V AG   + +  RR +      +NN  +++   ++   DF       +  GKK
Sbjct: 358 MVAAGVVDTKSGGRRAVAEGGAYLNNVKVADPDQRLTDDDFLCGRVALVRRGKK 411


>gi|71892149|ref|YP_277881.1| tyrosyl-tRNA synthetase [Candidatus Blochmannia pennsylvanicus str.
           BPEN]
 gi|97197550|sp|Q492T7|SYY_BLOPB RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|71796255|gb|AAZ41006.1| tyrosyl-tRNA synthetase [Candidatus Blochmannia pennsylvanicus str.
           BPEN]
          Length = 427

 Score =  426 bits (1095), Expect = e-117,   Method: Composition-based stats.
 Identities = 158/424 (37%), Positives = 230/424 (54%), Gaps = 10/424 (2%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M     D + +L ER  I QI+N   L  +     +T Y G+D T+ SLH GHL  L+ L
Sbjct: 1   MNNKNIDIIQLLYERDLIAQITNQEALIKILKSKSITLYCGFDPTSDSLHIGHLVPLLCL 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG-TG 119
              Q  GH+PI L+GGGT +IGDPSF+D  R++   + +Q+ IEKIK   S F+ +  + 
Sbjct: 61  RQFQIFGHRPIILLGGGTGLIGDPSFKDSERKLNLIETVQKWIEKIKYQVSLFVDFSHSQ 120

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMI 178
            + A ++NN  WL SI  +  LR+IG FFSVN+M++ ++++ RL++    +S+ EF+Y +
Sbjct: 121 YSQACIVNNYDWLSSISLLTFLRDIGKFFSVNKMINKDAIKKRLQKNNYGISYTEFSYNL 180

Query: 179 LQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMG 238
           LQ+YDF  L KNY+  LQ+GGSDQWGNII GIDL  R+     + LT PLLT +  TK G
Sbjct: 181 LQSYDFTYLHKNYNAILQIGGSDQWGNIISGIDLIHRIYKRTTYGLTMPLLTKSDNTKFG 240

Query: 239 KTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEIN 296
           KT    IWL+ + TSPY F+QYW N  D +V  F K  T + +  I+ + K         
Sbjct: 241 KTEKHTIWLDAKKTSPYTFYQYWINTSDEEVYRFLKFFTNIDVDAINTLKKEDKMKNTKP 300

Query: 297 EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRGM 350
           +A+ I+A EIT +VHG+   + A       F   IH   +          I    +  G+
Sbjct: 301 QAQIILAEEITRLVHGKSGLKTAQKITRNLFTGQIHKLTLDDFEQLFQDGIPTVPLKAGI 360

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            L   +V++    S  +AR  + SN+I +N+      +      D        L  GKK+
Sbjct: 361 TLQQALVESKLVVSRAQARELISSNSITVNSKKQLKTEYIFCATDRLYNRFTLLRRGKKH 420

Query: 411 HIIC 414
           H + 
Sbjct: 421 HCLI 424


>gi|83858728|ref|ZP_00952250.1| tyrosyl-tRNA synthetase [Oceanicaulis alexandrii HTCC2633]
 gi|83853551|gb|EAP91403.1| tyrosyl-tRNA synthetase [Oceanicaulis alexandrii HTCC2633]
          Length = 429

 Score =  426 bits (1095), Expect = e-117,   Method: Composition-based stats.
 Identities = 139/424 (32%), Positives = 236/424 (55%), Gaps = 20/424 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           FL+ +  RG ++Q + P   D   ++     Y+G+D +A SLHAG+L  L+ +   ++ G
Sbjct: 13  FLADMEARGLLNQKT-PELTDAYITEHRPAMYVGFDPSAPSLHAGNLMPLLGMDRYRQRG 71

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
            + + L+GG T +IGDPS +D  R +     ++ NIE  +  F        G      +N
Sbjct: 72  GQVVVLLGGATGLIGDPSGKDAERNLQTEDVVEANIEGQRKQFERLFALTDGPEPIY-VN 130

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK-REQSLSFLEFNYMILQAYDFVE 186
           N  W   +  +  LR++G  FSVN ML+ +SVR+R++ R+Q +SF EF+Y +LQ YDFV 
Sbjct: 131 NADWWRKMDVVSFLRDVGKHFSVNAMLTKDSVRNRIENRDQGISFTEFSYQLLQGYDFVH 190

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + ++ ++QMGGSDQWGNI+ G+DL  R++  +  A+T PLLT + G K GK+  GA+W
Sbjct: 191 LHRAHNVQIQMGGSDQWGNIVGGVDLMRRIEGVQAHAVTYPLLTNSEGKKYGKSEKGAVW 250

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           ++ ++TSPY F+Q+W N  DAD   F   LT + +++++ + + +   +   +K +A  +
Sbjct: 251 IDPDLTSPYEFYQFWLNSADADAPKFLSWLTDVDLAQLEELTQAE-PHLRLPQKALAELL 309

Query: 307 TTMVHGREEAEKAATAAMECFDM----------SIHSQHMPTISISKDEVSRGMGLLTLI 356
           T  VHG++ A+ A  A+   F             + ++ +PT+  S +E    + L+  +
Sbjct: 310 TARVHGQKAADLAIEASQVIFKGQSDNLSAELIDMIARAVPTLDASANE---PLPLIDAL 366

Query: 357 VK--AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           V    G + S +EARR LK N++ +N   + +E   ++ +     G + +S GK    + 
Sbjct: 367 VAETLGASASKSEARRLLKQNSVSLNGQKVQDENADVR-EHRTGAGAVVMSVGKAKRFLI 425

Query: 415 HLCG 418
              G
Sbjct: 426 RFNG 429


>gi|256383894|gb|ACU78464.1| tyrosine--tRNA ligase [Mycoplasma mycoides subsp. capri str. GM12]
 gi|256384725|gb|ACU79294.1| tyrosine--tRNA ligase [Mycoplasma mycoides subsp. capri str. GM12]
 gi|296455264|gb|ADH21499.1| tyrosine--tRNA ligase [synthetic Mycoplasma mycoides JCVI-syn1.0]
          Length = 414

 Score =  426 bits (1095), Expect = e-117,   Method: Composition-based stats.
 Identities = 151/422 (35%), Positives = 221/422 (52%), Gaps = 18/422 (4%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
            K++ L  L  RG I QI+N  ++    +      Y G+D TA SLH GHL  ++ L   
Sbjct: 1   MKNNILEELKWRGLIKQITNESKILDAQNNSD-AVYCGFDPTADSLHVGHLMMIITLKRF 59

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
                KPI+L+GG T +IGDPSF+   R +    +++ NI KI       I       + 
Sbjct: 60  ADYNFKPIALIGGATGMIGDPSFKANERVLQTKDQVEHNINKISAQLKQII------PNV 113

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
             +NN TWL SI  ID LR+IG  F+++ +L+ ES+ +R+  +  LS  EF Y +LQAYD
Sbjct: 114 NFVNNNTWLSSISLIDFLRDIGKHFNLSYLLAKESIATRI--QTGLSVTEFCYTMLQAYD 171

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERL--KTPKLFALTSPLLTTASGTKMGKTL 241
           F  L KN +C +Q+GGSDQWGNI  GID       K  K   LT  LLT + G K GKT 
Sbjct: 172 FYYLYKNNNCSIQIGGSDQWGNITSGIDFISDTINKNNKAAGLTINLLTKSDGQKFGKTE 231

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAK 299
           SGA+WL+K  TS Y F+Q+W N  D D ++  K LT L   +ID + K    +   +  +
Sbjct: 232 SGAVWLDKTKTSEYEFYQFWFNQTDQDSINLLKCLTFLTKEQIDNLIKEHQNQPSKHLLQ 291

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQ-----HMPTISISKDEVSRGMGLLT 354
           K +A+E+T  VH ++  +KA       F   + S       M   S+   ++++   ++ 
Sbjct: 292 KALASEMTKFVHQQQGLDKALKLTEAFFSGDLFSLTDDLFKMALNSLPNTQINKDTKVID 351

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +++   A+S  EAR  L + AI INN II +E   I   D      + +  GKK + + 
Sbjct: 352 ALIEVKAASSKREAREFLTNKAIMINNQIIEDENTLISSFDLIQNKYLLVKKGKKKYFVI 411

Query: 415 HL 416
            +
Sbjct: 412 LI 413


>gi|88608544|ref|YP_506234.1| tyrosyl-tRNA synthetase [Neorickettsia sennetsu str. Miyayama]
 gi|88600713|gb|ABD46181.1| tyrosyl-tRNA synthetase [Neorickettsia sennetsu str. Miyayama]
          Length = 391

 Score =  425 bits (1093), Expect = e-117,   Method: Composition-based stats.
 Identities = 175/408 (42%), Positives = 263/408 (64%), Gaps = 21/408 (5%)

Query: 9   LSILSERGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           L I+ ERG+  Q ++   L+     G  +  Y+G+D TAS++H GHL  LML+  ++  G
Sbjct: 2   LKIIEERGYFFQCTDREALEHRLHSGEKLVFYLGFDCTASAIHLGHLVPLMLMRLVKSYG 61

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+ I L+GGGT++IGDPS +D+SR+++  +EI  N++ I  I    +       D   +N
Sbjct: 62  HEVIILLGGGTTLIGDPSGKDKSRKILSREEINRNVDTISKIVKRVV------GDVRFVN 115

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  I+YID LR +G  FS+NRML+F+SV+SRL RE  LSFLEF+YMILQAYDFVEL
Sbjct: 116 NVDWLEDIRYIDFLRNVGRHFSINRMLTFDSVKSRLDRESHLSFLEFSYMILQAYDFVEL 175

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            + Y+C +Q+GG DQWGNI+ G++LG +L+  +LF LT PL+TTASG KMGKT  GA+WL
Sbjct: 176 NRLYNCSVQVGGGDQWGNIVNGVELGRKLRNTQLFGLTVPLITTASGKKMGKTEEGAVWL 235

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           + ++ SP+++WQY+RN +D+DV  F +  T LP+ EI+ ++     +INEAKK++ATE T
Sbjct: 236 DADLYSPHDYWQYFRNTEDSDVERFLRLFTELPIDEIETLSACDDAQINEAKKVLATEAT 295

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
            + HG   AE+ +T+ ++ F+    SQ +P I +       G  ++ ++++   A+S  +
Sbjct: 296 RICHGSVIAEEVSTSIIKAFEEDDLSQ-LPEIRVPH-----GANIIDVVIRIEAASSRTQ 349

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK-NHIIC 414
           A+R ++S A+KI+   I    L +  Q         +S GKK  +II 
Sbjct: 350 AKRLIESGAVKIDKKKILTYNLDLPEQ-------FVVSVGKKQRNIIV 390


>gi|295098920|emb|CBK88009.1| tyrosyl-tRNA synthetase [Eubacterium cylindroides T2-87]
          Length = 412

 Score =  424 bits (1092), Expect = e-117,   Method: Composition-based stats.
 Identities = 144/421 (34%), Positives = 222/421 (52%), Gaps = 22/421 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L  RG +  I++P  +    +   +T YIG D TA SLH GH + L++   L+K 
Sbjct: 2   NLFEELEWRGLVDNITSPE-VKDAINNEKLTFYIGTDPTADSLHIGHYSSLLMAKRLEKH 60

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH PI L+GG T  IGDP    E R M+  + ++ N + +    S    +        M+
Sbjct: 61  GHHPIMLVGGATGFIGDPKATGE-RNMLTQETLKANYDALHEQISKLWGFE-------MV 112

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I  ID LR+ G FF+VN M++ E+V+ RL  +  +S+ EF+YMILQ+ DF+ 
Sbjct: 113 NNLDWTKDISVIDFLRDYGKFFNVNYMINKETVKKRL--DTGISYTEFSYMILQSLDFLH 170

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSGA 244
           L +  +C LQ+GG DQWGNI  G++L  +      K + LT PL+T A GTK GK+ SG 
Sbjct: 171 LYQEKNCTLQIGGQDQWGNITSGLELIRKKCGADVKCYGLTMPLITKADGTKFGKSESGT 230

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKII 302
           +WL+   TSPY  +Q+  N DD  V+ + K+LT L   +I+ +      E ++  A+K +
Sbjct: 231 VWLDASKTSPYELYQFLFNTDDRKVIEYLKKLTFLTREQIEELEVSLQNEPHKRLAQKTL 290

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHS----QHMPTI-SISKDEVSRGMGLLTLIV 357
           A+E+   +HG+E  + A       F   I      Q +  I ++ K    +G  LL  +V
Sbjct: 291 ASEVVRDLHGQEGLDCALKITEALFKGKIQELTDDQKLDAIRNMEKLHCEQGKTLLETLV 350

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF--DSTGNIKLSFGKKNHIICH 415
           ++G A+S  EAR  +K N+I +N + I++    +   +          +  GKKN+    
Sbjct: 351 ESGIASSRREAREWIKGNSIMVNGTKITDPDYMMTPDNHCVCVKNYSIIRRGKKNYYCLE 410

Query: 416 L 416
           L
Sbjct: 411 L 411


>gi|226491732|ref|NP_001141566.1| hypothetical protein LOC100273682 [Zea mays]
 gi|194705090|gb|ACF86629.1| unknown [Zea mays]
          Length = 496

 Score =  424 bits (1092), Expect = e-116,   Method: Composition-based stats.
 Identities = 145/448 (32%), Positives = 221/448 (49%), Gaps = 40/448 (8%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
             + +L +RG +  I++          G +  Y G+D TA SLH G+L  L+ L W ++ 
Sbjct: 52  GVVDVLMKRGLVEAITSEAL--AAARPGELKVYCGFDPTAESLHLGNLLGLVALSWFRRC 109

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFI------------ 114
           GH  ++L+GG T  +GDPS +   R  +    ++ N + IK + +  +            
Sbjct: 110 GHTAVALIGGATGRVGDPSGKSSERPELGIAAVEGNSDAIKSLVAQILGRVPEPAHRSHS 169

Query: 115 --KYGTGKTDAL---------MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL 163
             K  +    A          +L+N  W   I  +D LRE+G F  V  M++ ESV+ RL
Sbjct: 170 GQKELSLDNSANSSQTMGSFLILDNYDWWKDITLLDFLREVGRFARVGTMIAKESVKKRL 229

Query: 164 KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK-LF 222
             E  +S+ EF Y +LQ YDF+ + KN    +Q+GGSDQWGNI  G +L  ++   +   
Sbjct: 230 ASEDGMSYTEFTYQLLQGYDFLYMFKNMGVNVQIGGSDQWGNITAGTELIRKILQVEGAH 289

Query: 223 ALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMS 282
            LT PLL  + GTK GKT  GAIWL+ +M SPY F+QY+  + D DV+ F K LT L + 
Sbjct: 290 GLTFPLLLKSDGTKFGKTEDGAIWLSSKMLSPYKFYQYFFAVPDIDVIRFMKILTFLSLD 349

Query: 283 EI---DRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDM---------- 329
           EI   +   K  G   N  +K +A E+T  VHG E  E+A  A                 
Sbjct: 350 EILELEDSMKKPGYVPNTVQKRLAEEVTRFVHGEEGLEEALKATEALRPGAQTQLDAQTI 409

Query: 330 SIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKL 389
              +  +P+ S++ D+V +   L+ L V  G  TS +  +R +K   + +NN  I +E  
Sbjct: 410 EGIADDVPSCSLAYDQVFKS-PLIDLAVSTGLLTSKSAVKRLIKQGGLYLNNVRIDSEDK 468

Query: 390 QIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            ++  D      + LS GKKN ++  + 
Sbjct: 469 LVEEGDIVDGKVLLLSAGKKNKMVVRIS 496


>gi|331703663|ref|YP_004400350.1| Tyrosine tRNA ligase [Mycoplasma mycoides subsp. capri LC str.
           95010]
 gi|328802218|emb|CBW54372.1| Tyrosine tRNA ligase [Mycoplasma mycoides subsp. capri LC str.
           95010]
          Length = 414

 Score =  424 bits (1091), Expect = e-116,   Method: Composition-based stats.
 Identities = 149/422 (35%), Positives = 221/422 (52%), Gaps = 18/422 (4%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
            K+  L  L  RG I QI+N  ++    +      Y G+D TA SLH GHL  ++ L   
Sbjct: 1   MKNSILEELKWRGLIKQITNESKILDAQNNND-AVYCGFDPTADSLHVGHLMMIITLKRF 59

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
                KPI+L+GG T +IGDPSF+   R +    +++ NI KI       I       + 
Sbjct: 60  ADYNFKPIALIGGATGMIGDPSFKANERVLQTKDQVEHNINKISAQLKQII------PNV 113

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
             +NN TWL +I  ID LR+IG  F+++ +L+ ES+ +R+  +  LS  EF Y +LQAYD
Sbjct: 114 NFVNNNTWLSNISLIDFLRDIGKHFNLSYLLAKESIATRI--QTGLSVTEFCYTMLQAYD 171

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERL--KTPKLFALTSPLLTTASGTKMGKTL 241
           F  L KN +C +Q+GGSDQWGNI  GID       K  K   +T  LLT + G K GKT 
Sbjct: 172 FYYLYKNNNCSIQIGGSDQWGNITSGIDFISDTINKNNKAAGVTINLLTKSDGQKFGKTE 231

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAK 299
           SGA+WL+K  TS Y F+Q+W N  D D ++  K LT L   +ID + K    +   +  +
Sbjct: 232 SGAVWLDKTKTSEYEFYQFWFNQTDQDSINLLKCLTFLTKEQIDNLIKEHQNQPSKHLLQ 291

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQ-----HMPTISISKDEVSRGMGLLT 354
           K +A+E+T  VH ++  +KA       F   + S       M   S+   ++++ + ++ 
Sbjct: 292 KALASEMTKFVHQQQGLDKALKLTKAFFSGDLFSLTDDLFKMALNSLPNTQINKDIKVID 351

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +++   A+S  EAR  L + AI INN II +E   I   D      + +  GKK + + 
Sbjct: 352 ALIEVKAASSKREAREFLTNKAIMINNQIIEDENTLISSFDLIQNKYLLVKKGKKKYFVI 411

Query: 415 HL 416
            +
Sbjct: 412 LI 413


>gi|157834045|pdb|1TYC|A Chain A, Structural Analysis Of A Series Of Mutants Of Tyrosyl-Trna
           Synthetase: Enhancement Of Catalysis By Hydrophobic
           Interactions
          Length = 319

 Score =  423 bits (1089), Expect = e-116,   Method: Composition-based stats.
 Identities = 135/320 (42%), Positives = 193/320 (60%), Gaps = 5/320 (1%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D L+ L  RG ++Q ++   L  L ++  VT Y G+D TA SLH GHL  ++ +   Q+ 
Sbjct: 2   DLLAELQWRGLVNQTTDEDGLRKLLNEERVTLYCGFDPTADSLHIGHLAPILTMRRFQQA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI+L+GG T +IGDPS +   R +   + ++    +IK     F+ +      A + 
Sbjct: 62  GHRPIALVGGATGLIGDPSGKKSERTLNAKETVEAWSARIKEQLGRFLDFEADGNPAKIK 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W+  +  I  LR++G  FSVN M++ ESV+SR+  E  +SF EF+YM+LQAYDF+ 
Sbjct: 122 NNYDWIGPLDVITFLRDVGKHFSVNYMMAKESVQSRI--ETGISFTEFSYMMLQAYDFLR 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK-LFALTSPLLTTASGTKMGKTLSGAI 245
           L +   CRLQ+GGSDQWGNI  G++L  + K     F LT PL+T A GTK GKT SG I
Sbjct: 180 LYETEGCRLQIGGSDQWGNITAGLELIRKTKGEARAFGLTIPLVTKADGTKFGKTESGTI 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIA 303
           WL+KE TSPY F+Q+W N DD DV+ + K  T L   EI+ + +   +  E   A+K +A
Sbjct: 240 WLDKEKTSPYEFYQFWINTDDRDVIRYLKYFTFLSKEEIEALEQELREAPEKRAAQKTLA 299

Query: 304 TEITTMVHGREEAEKAATAA 323
            E+T +VHG E   +A   +
Sbjct: 300 EEVTKLVHGEEALRQAIRIS 319


>gi|325191257|emb|CCA26043.1| unnamed protein product [Albugo laibachii Nc14]
          Length = 421

 Score =  423 bits (1089), Expect = e-116,   Method: Composition-based stats.
 Identities = 138/392 (35%), Positives = 215/392 (54%), Gaps = 11/392 (2%)

Query: 37  TAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRS 96
           + Y G+D TASSLH G+L Q + L   Q +G++PI L+GG T +IGDPS R + R ++  
Sbjct: 27  SIYCGFDPTASSLHIGNLLQAIALRHFQLSGYRPILLIGGATGMIGDPSGRAQERSLLSD 86

Query: 97  QEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSF 156
             +Q N + +    S+ +      T A++LNN  W   +  +D +R +G  F +N+ML+ 
Sbjct: 87  AMVQSNAKSLLNGLSNVLDLSGSTTGAIVLNNADWHGKMTVMDWMRHVGRHFRINKMLAR 146

Query: 157 ESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL 216
           E+V+ RL+ E  +SFLEF+Y + QAYDF+ L + YDC  Q+GGSDQWGNI+ G DL ++ 
Sbjct: 147 ENVKRRLESENGISFLEFSYQLFQAYDFLHLYRQYDCHAQLGGSDQWGNIVGGCDLIKKS 206

Query: 217 KTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRL 276
              + F LT PLL T SG K GK+   A+WL+ + TS + F+QY+  + D DV +  K  
Sbjct: 207 TGKEAFGLTLPLLKTVSGEKYGKSAGNALWLDSKKTSVFEFYQYFLRVQDCDVENHLKCF 266

Query: 277 TTLPMSEIDRMAKLQGK--EINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIH-- 332
           T + + EI R+     K  E   A+K++A  +T M+HG +  +KA  A    F  +I   
Sbjct: 267 TFMELDEIHRIVLEHAKYPEKRLAQKMLADSVTRMIHGEDGLKKAKRATTALFSENISQL 326

Query: 333 -SQHMPT------ISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIIS 385
            S  +        + + + E      L+ ++V  G   S  EARR +    + +NN+ I 
Sbjct: 327 ESSDIEELVRHAPVHMKRYEEIVQQHLVDVMVATGICKSKAEARRLILGGGVYVNNTRIR 386

Query: 386 NEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           +    I+      TG + +  GK+N  +  + 
Sbjct: 387 DGNHMIQSDQVIGTGFVLIRTGKRNSHLLKIA 418


>gi|293400557|ref|ZP_06644702.1| tyrosine--tRNA ligase [Erysipelotrichaceae bacterium 5_2_54FAA]
 gi|291305583|gb|EFE46827.1| tyrosine--tRNA ligase [Erysipelotrichaceae bacterium 5_2_54FAA]
          Length = 407

 Score =  423 bits (1088), Expect = e-116,   Method: Composition-based stats.
 Identities = 137/415 (33%), Positives = 213/415 (51%), Gaps = 18/415 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L  RG I   S+P+ ++ + +   VT YIG D T  SLH GH +  ++   L++ 
Sbjct: 2   NIYEELVWRGLIKDCSSPK-IENMLNNEKVTFYIGTDPTGDSLHIGHYSSFLISKRLKQA 60

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH PI L+GGGT +IGDP      R M+   E+  N   +K        +        ++
Sbjct: 61  GHNPILLVGGGTGLIGDPKP-TAERAMISKDEVAHNFACLKKQAQDVFGFE-------VV 112

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W+  I  +D LR+ G +F++N ML+ + V  RL  ++ +++ EF+YMILQA DF+ 
Sbjct: 113 NNYDWIKDINTLDFLRDYGKYFNINYMLNKDIVARRL--DEGITYTEFSYMILQALDFMH 170

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L +N +C +Q+ G DQWGNI  GI+L  +    + +  T PL+T A GTK GK+   AIW
Sbjct: 171 LYENRNCIMQVAGQDQWGNITAGIELIRKKLGKEAYGFTMPLVTKADGTKFGKSEGKAIW 230

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKKIIAT 304
           L+K  TS Y  +Q+  N +D+ V+ + K LT L   EI+ + +         EA+K +A 
Sbjct: 231 LDKNKTSSYELYQFLVNSEDSKVIEYLKTLTFLSREEIEDLEEKTKIDAGRREAQKALAK 290

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS-----ISKDEVSRGMGLLTLIVKA 359
            +   +HG EE EKA       F  +I       +           V   M LL ++V+A
Sbjct: 291 AVVIDLHGEEEYEKALKITNAFFKGNIKDLTSDELEDALHGFDSIAVDDRMPLLDVLVQA 350

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
             A+S  EAR  +K  +I+IN   I + +  +      +T    +  GK+N+ + 
Sbjct: 351 KIASSKREAREWIKQGSIQINGERIKDCEFIVSSTHAITTNKTIIKRGKRNYYVI 405


>gi|58697387|ref|ZP_00372710.1| tyrosyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           simulans]
 gi|58536210|gb|EAL59772.1| tyrosyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           simulans]
          Length = 352

 Score =  423 bits (1087), Expect = e-116,   Method: Composition-based stats.
 Identities = 188/349 (53%), Positives = 258/349 (73%), Gaps = 2/349 (0%)

Query: 6   SDFLSILSERGFIHQISNPRELDILC-SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           S+FL+ + ERG+++Q +N   LD L      + AYIG+D TA SLHAGHL Q+M+L  LQ
Sbjct: 5   SEFLNFIQERGYLYQCTNIEGLDQLLLQSNYIVAYIGFDCTAPSLHAGHLIQIMMLCHLQ 64

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           K G+KPI L+GGGT+ IGDPSF+D++R ++  + I +N   I+ I    + +   KT A+
Sbjct: 65  KFGYKPIVLLGGGTTKIGDPSFKDKARSILPVENINQNTSSIRRILEKMVSFNDSKTGAM 124

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           ++NN  WL +IKYID LR+IG++FSVNRMLSF+SV++RL REQ+LSFLEFNYM+LQAYDF
Sbjct: 125 IVNNADWLDNIKYIDFLRDIGAYFSVNRMLSFDSVKTRLDREQTLSFLEFNYMLLQAYDF 184

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           +EL K YDCRLQ+GGSDQWGNI+ GI+LG++L  P+LF LT PLL  A G KMGKT SGA
Sbjct: 185 IELNKKYDCRLQIGGSDQWGNIVNGIELGKKLNLPELFGLTMPLLLNAQGKKMGKTESGA 244

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +WL+  M  PY++WQY+RN+DD DV  F + LT +P+ EI ++  L+ +EINEAKK++AT
Sbjct: 245 VWLDDNMLKPYDYWQYFRNVDDQDVGRFLRLLTDVPIDEIRKLESLKDQEINEAKKVLAT 304

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLL 353
           E+T + HG +EAE A  AA+  F+ +  S  +P   I K++V+ G+ L+
Sbjct: 305 EVTKICHGDKEAELAQFAAISAFE-NEDSSLLPDYIIKKEQVASGISLV 352


>gi|307107938|gb|EFN56179.1| hypothetical protein CHLNCDRAFT_48743 [Chlorella variabilis]
          Length = 440

 Score =  423 bits (1087), Expect = e-116,   Method: Composition-based stats.
 Identities = 135/426 (31%), Positives = 218/426 (51%), Gaps = 39/426 (9%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D ++ L  RG +  +++P  L  + +Q  + AY G+D TA SLH G+L  +++L W Q+ 
Sbjct: 39  DVVAALRSRGLLQDVTSPD-LAAVSTQEQLLAYCGFDPTAESLHLGNLLGIIVLAWFQRC 97

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK--YGTGKTDAL 124
           GH+P++L+GG T  +GDPS +   R ++  + I+ N+  I+    + ++   G+G  + L
Sbjct: 98  GHRPVALLGGATGRVGDPSGKSAERPVLSEKVIERNVAGIERTLRTLLQPPPGSGLPEPL 157

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           +LNN  W   +  +  LREIG +  V  ML+ ESVR R++ +  +S+ EF Y +LQ YDF
Sbjct: 158 VLNNLDWFGGMGLLTFLREIGKYARVGTMLAKESVRKRMESDTGISYTEFTYQLLQGYDF 217

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
           V + + Y  R+Q                         F LT PLL  A G+K GK+ SGA
Sbjct: 218 VHMRRQYGVRVQ----------------------EPCFGLTFPLLLKADGSKFGKSESGA 255

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID---RMAKLQGKEINEAKKI 301
           +WLN +M SPY F+Q+     DADV+ F + LT LP+ EI+      +  G   N A++ 
Sbjct: 256 LWLNGDMMSPYQFYQFLFKTADADVLKFLRMLTFLPLEEIEALGASMQSPGYVANTAQRR 315

Query: 302 IATEITTMVHGREEAEKAATAAMECF----------DMSIHSQHMPTISISKDEVSRGMG 351
           +A E+T  VHG E   +A  A                +   +   P+ S+ +D+V  G  
Sbjct: 316 LAEEVTRFVHGEEGLRQALKATEALAPGAATKLDADSLEAAAGDAPSASLPRDQVV-GAP 374

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           L  ++V  G   S    RR +K   +++NN  + +E   +   D      + ++ GKKN 
Sbjct: 375 LADVMVAVGMQPSKAAVRRMIKGGGVRVNNEKVDDELAALGEDDLIDGRLVLIAAGKKNK 434

Query: 412 IICHLC 417
           ++  + 
Sbjct: 435 MLVRVA 440


>gi|60593917|pdb|1WQ4|A Chain A, Escherichia Coli Tyrosyl-Trna Synthetase Mutant Complexed
           With L-Tyrosine
          Length = 321

 Score =  422 bits (1086), Expect = e-116,   Method: Composition-based stats.
 Identities = 137/320 (42%), Positives = 196/320 (61%), Gaps = 5/320 (1%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +    G+D TA SLH GHL  L+ L   Q+
Sbjct: 3   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALVCGFDPTADSLHLGHLVPLLCLKRFQQ 62

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +QE ++KI+   + F+ +  G+  A+ 
Sbjct: 63  AGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDCGENSAIA 122

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDF 184
            NN  W  ++  +  LR+IG  FSVN+M++ E+V+ RL RE Q +SF EF+Y +LQ YDF
Sbjct: 123 ANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNREDQGISFTEFSYNLLQGYDF 182

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K Y   L +GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 183 ACLNKQYGVVLCIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 242

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI   +   K  GK    A+ +
Sbjct: 243 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINALEEEDKNSGKAPR-AQYV 301

Query: 302 IATEITTMVHGREEAEKAAT 321
           +A ++T +VHG E  + A  
Sbjct: 302 LAEQVTRLVHGEEGLQAAKR 321


>gi|328948364|ref|YP_004365701.1| Tyrosyl-tRNA synthetase [Treponema succinifaciens DSM 2489]
 gi|328448688|gb|AEB14404.1| Tyrosyl-tRNA synthetase [Treponema succinifaciens DSM 2489]
          Length = 410

 Score =  422 bits (1086), Expect = e-116,   Method: Composition-based stats.
 Identities = 134/416 (32%), Positives = 209/416 (50%), Gaps = 16/416 (3%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           F   L  RG +  ++    +    +   +T Y G D TA SLH GH + L+    L + G
Sbjct: 3   FFEELQWRGLVKDVAGED-IADKLNNEKITFYWGTDPTADSLHLGHYSSLVTAKRLARAG 61

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H PI L+GG T +IGDP      R ++  + +++N+  IK            +  A ++N
Sbjct: 62  HHPILLVGGSTGLIGDPRP-TAEREIISHETLEKNLAGIKSQVDRIF-----EGKAEIVN 115

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W     +++ LR+IG + +VN MLS E +  RL  +  ++F EF+Y +LQ YDF+ L
Sbjct: 116 NYDWTKDYTFLEFLRDIGKYINVNYMLSKEIISRRL--DTGITFAEFSYTLLQGYDFLWL 173

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            +N +C LQ  G+DQWGNI  G++L  +++  + +  T PL+    G K GK+   A+WL
Sbjct: 174 YRNKNCILQAEGADQWGNITTGLELIRKIEGKEAYGFTMPLVLDKYGNKFGKSAGNALWL 233

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATE 305
           +   TS Y  +QY  N+DD+ VV + K  T L   +I+ +     +  E+ EA K +A E
Sbjct: 234 DLNKTSSYELYQYLVNVDDSMVVDYLKIFTFLSKEQIEELEAKNKEHPELREAHKALARE 293

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV-----SRGMGLLTLIVKAG 360
           I T +HG  E  KA   +   F   + S  +  I I   +V     S G  L+ ++V   
Sbjct: 294 IITDLHGAAEFVKAVNISSSLFSGDVKSLSLKDIEIGFKDVPTISISEGEKLIDVLVNNK 353

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            A+S  EAR  L + +I +N    ++E + +  Q       I L  GKK + I   
Sbjct: 354 IASSKREAREFLAAGSITLNGEKFTDENMPVTSQLAIEGKVIVLRRGKKKNYIVKF 409


>gi|42561212|ref|NP_975663.1| tyrosine-tRNA ligase [Mycoplasma mycoides subsp. mycoides SC str.
           PG1]
 gi|81400501|sp|Q6MST3|SYY_MYCMS RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|42492710|emb|CAE77305.1| tyrosine-tRNA ligase [Mycoplasma mycoides subsp. mycoides SC str.
           PG1]
 gi|301321009|gb|ADK69652.1| tyrosine--tRNA ligase [Mycoplasma mycoides subsp. mycoides SC str.
           Gladysdale]
          Length = 414

 Score =  422 bits (1085), Expect = e-116,   Method: Composition-based stats.
 Identities = 150/422 (35%), Positives = 219/422 (51%), Gaps = 18/422 (4%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
            K+  L  L  RG I QI+N  ++    +      Y G+D TA SLH GHL  ++ L   
Sbjct: 1   MKNSILEELKWRGLIKQITNESKILDAQNNND-AVYCGFDPTADSLHVGHLMMIITLKRF 59

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
                KPI+L+GG T +IGDPSF+   R +    +++ NI KI       I       + 
Sbjct: 60  ADYNFKPIALIGGATGMIGDPSFKANERVLQTKDQVEHNINKISAQLKQII------PNV 113

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
             +NN TWL +I  ID LR+IG  F+++ +L+ ES+ +R+  +  LS  EF Y +LQAYD
Sbjct: 114 NFVNNNTWLSNISLIDFLRDIGKHFNLSYLLAKESIATRI--QTGLSVTEFCYTMLQAYD 171

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERL--KTPKLFALTSPLLTTASGTKMGKTL 241
           F  L KN +C +Q+GGSDQWGNI  GID       K  K   LT  LLT + G K GKT 
Sbjct: 172 FYYLYKNNNCSIQIGGSDQWGNITSGIDFISDTINKNNKAAGLTINLLTKSDGQKFGKTE 231

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE--INEAK 299
           SG IWL+K  TS Y F+Q+W N  D D ++  K LT L   +ID + K    +   +  +
Sbjct: 232 SGTIWLDKTKTSEYEFYQFWFNQTDQDSINLLKCLTFLTKEQIDNLIKEHQNQSSKHLLQ 291

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQ-----HMPTISISKDEVSRGMGLLT 354
           K +A+E+T  VH ++  +KA       F   + S       M   S+   ++++   ++ 
Sbjct: 292 KALASEMTKFVHQQQGLDKALKLTEAFFSGDLFSLTNDLFKMALNSLPNTQINKDTKVID 351

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +++   A+S  EAR  L + AI INN II +E   I   D      + +  GKK + + 
Sbjct: 352 ALIEVKAASSKREAREFLTNKAIMINNQIIEDENTLISSFDLIQNKYLLVKKGKKKYFVI 411

Query: 415 HL 416
            +
Sbjct: 412 LI 413


>gi|60593916|pdb|1WQ3|A Chain A, Escherichia Coli Tyrosyl-Trna Synthetase Mutant Comlexed
           With 3-Iodo-L-Tyrosine
 gi|186972908|pdb|2YXN|A Chain A, Structual Basis Of Azido-Tyrosine Recognition By
           Engineered Bacterial Tyrosyl-Trna Synthetase
          Length = 322

 Score =  422 bits (1085), Expect = e-116,   Method: Composition-based stats.
 Identities = 137/320 (42%), Positives = 196/320 (61%), Gaps = 5/320 (1%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +    G+D TA SLH GHL  L+ L   Q+
Sbjct: 4   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALVCGFDPTADSLHLGHLVPLLCLKRFQQ 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +QE ++KI+   + F+ +  G+  A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDCGENSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDF 184
            NN  W  ++  +  LR+IG  FSVN+M++ E+V+ RL RE Q +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNREDQGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K Y   L +GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 184 ACLNKQYGVVLCIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKI 301
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI   +   K  GK    A+ +
Sbjct: 244 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINALEEEDKNSGKAPR-AQYV 302

Query: 302 IATEITTMVHGREEAEKAAT 321
           +A ++T +VHG E  + A  
Sbjct: 303 LAEQVTRLVHGEEGLQAAKR 322


>gi|494693|pdb|1TYD|E Chain E, Structure Of Tyrosyl-Trna Synthetase Refined At 2.3
           Angstroms Resolution. Interaction Of The Enzyme With The
           Tyrosyl Adenylate Intermediate
          Length = 319

 Score =  421 bits (1084), Expect = e-116,   Method: Composition-based stats.
 Identities = 135/320 (42%), Positives = 193/320 (60%), Gaps = 5/320 (1%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D L+ L  RG ++Q ++   L  L ++  VT Y G+D TA SLH GHL  ++ +   Q+ 
Sbjct: 2   DLLAELQWRGLVNQTTDEDGLRKLLNEERVTLYCGFDPTADSLHIGHLASILTMRRFQQA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI+L+GG T +IGDPS +   R +   + ++    +IK     F+ +      A + 
Sbjct: 62  GHRPIALVGGATGLIGDPSGKKSERTLNAKETVEAWSARIKEQLGRFLDFEADGNPAKIK 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W+  +  I  LR++G  FSVN M++ ESV+SR+  E  +SF EF+YM+LQAYDF+ 
Sbjct: 122 NNYDWIGPLDVITFLRDVGKHFSVNYMMAKESVQSRI--ETGISFTEFSYMMLQAYDFLR 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK-LFALTSPLLTTASGTKMGKTLSGAI 245
           L +   CRLQ+GGSDQWGNI  G++L  + K     F LT PL+T A GTK GKT SG I
Sbjct: 180 LYETEGCRLQIGGSDQWGNITAGLELIRKTKGEARAFGLTIPLVTKADGTKFGKTESGTI 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIA 303
           WL+KE TSPY F+Q+W N DD DV+ + K  T L   EI+ + +   +  E   A+K +A
Sbjct: 240 WLDKEKTSPYEFYQFWINTDDRDVIRYLKYFTFLSKEEIEALEQELREAPEKRAAQKTLA 299

Query: 304 TEITTMVHGREEAEKAATAA 323
            E+T +VHG E   +A   +
Sbjct: 300 EEVTKLVHGEEALRQAIRIS 319


>gi|494688|pdb|1TYA|E Chain E, Structural Analysis Of A Series Of Mutants Of Tyrosyl-Trna
           Synthetase: Enhancement Of Catalysis By Hydrophobic
           Interactions
          Length = 319

 Score =  421 bits (1084), Expect = e-116,   Method: Composition-based stats.
 Identities = 135/320 (42%), Positives = 193/320 (60%), Gaps = 5/320 (1%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D L+ L  RG ++Q ++   L  L ++  VT Y G+D TA SLH GHL  ++ +   Q+ 
Sbjct: 2   DLLAELQWRGLVNQTTDEDGLRKLLNEERVTLYCGFDPTADSLHIGHLAAILTMRRFQQA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI+L+GG T +IGDPS +   R +   + ++    +IK     F+ +      A + 
Sbjct: 62  GHRPIALVGGATGLIGDPSGKKSERTLNAKETVEAWSARIKEQLGRFLDFEADGNPAKIK 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W+  +  I  LR++G  FSVN M++ ESV+SR+  E  +SF EF+YM+LQAYDF+ 
Sbjct: 122 NNYDWIGPLDVITFLRDVGKHFSVNYMMAKESVQSRI--ETGISFTEFSYMMLQAYDFLR 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK-LFALTSPLLTTASGTKMGKTLSGAI 245
           L +   CRLQ+GGSDQWGNI  G++L  + K     F LT PL+T A GTK GKT SG I
Sbjct: 180 LYETEGCRLQIGGSDQWGNITAGLELIRKTKGEARAFGLTIPLVTKADGTKFGKTESGTI 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIA 303
           WL+KE TSPY F+Q+W N DD DV+ + K  T L   EI+ + +   +  E   A+K +A
Sbjct: 240 WLDKEKTSPYEFYQFWINTDDRDVIRYLKYFTFLSKEEIEALEQELREAPEKRAAQKTLA 299

Query: 304 TEITTMVHGREEAEKAATAA 323
            E+T +VHG E   +A   +
Sbjct: 300 EEVTKLVHGEEALRQAIRIS 319


>gi|125570522|gb|EAZ12037.1| hypothetical protein OsJ_01916 [Oryza sativa Japonica Group]
          Length = 545

 Score =  421 bits (1084), Expect = e-116,   Method: Composition-based stats.
 Identities = 138/425 (32%), Positives = 216/425 (50%), Gaps = 17/425 (4%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           +S+L ERG +   ++        S   + AY G+D TA SLH G+L  L++L W ++ GH
Sbjct: 122 VSVLRERGLVEATTSESLGSASASPRELKAYCGFDPTAESLHLGNLLGLVVLSWFRRCGH 181

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA--LML 126
             ++L+GG T  +G PS +   R  +    ++ N   IK +    +      ++    +L
Sbjct: 182 NAVALVGGATGRVGYPSGKSPERPELELAAVETNSNAIKSLIGQILDRAPEPSNIRNPIL 241

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           +N  W   I  +D L+E+G F  V  M++ ESV+ RL  E  +S+ EF Y +LQ YDF+ 
Sbjct: 242 DNYDWWKDITLLDFLKEVGRFARVGTMIAKESVKKRLMSEDGMSYTEFTYQLLQGYDFLY 301

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK-LFALTSPLLTTASGTKMGKTLSGAI 245
           + +N    +Q+GGSDQWGNI  G +L  ++   +    LT PLL  + GTK GKT  GAI
Sbjct: 302 MFRNMGVNVQIGGSDQWGNITAGTELIRKILQVEGAHGLTFPLLLKSDGTKFGKTEDGAI 361

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKII 302
           WL+ +M SPY F+QY+ ++ D DV+ F K LT + + EI   +   K  G   N  ++ +
Sbjct: 362 WLSPKMLSPYKFYQYFFSVPDIDVIRFMKILTFMSLDEIQELEESMKKPGYVPNTIQRRL 421

Query: 303 ATEITTMVHGREEAEKAATAAMECFDM----------SIHSQHMPTISISKDEVSRGMGL 352
           A E+T  VHG E  E+A  A                    +  +P+  +   +V +   L
Sbjct: 422 AEEVTRFVHGEEGLEEALKATEALRPGAQTQLDSQTIEGIADDVPSCFLPYGQVLKS-PL 480

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           + L V  G   S +  RR +K   + +NN  I +E   ++  D      + LS GKKN +
Sbjct: 481 VDLAVSTGLLASKSAVRRLIKQGGLYLNNIRIDSEDKLVEEGDVVDGKVLLLSAGKKNKM 540

Query: 413 ICHLC 417
           +  + 
Sbjct: 541 VVRIS 545



 Score = 72.2 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 25/77 (32%), Positives = 41/77 (53%)

Query: 2   PAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
              +   + +L ERG +   ++        S   + AY G+D TA SLH G+L  L++L 
Sbjct: 43  TVIRRSVVEVLRERGLVEATTSESLGSASASPRELKAYCGFDPTAESLHLGNLLGLVVLS 102

Query: 62  WLQKTGHKPISLMGGGT 78
           W ++ GH  ++L+GG T
Sbjct: 103 WFRRCGHNAVALVGGAT 119


>gi|494690|pdb|1TYB|E Chain E, Structural Analysis Of A Series Of Mutants Of Tyrosyl-Trna
           Synthetase: Enhancement Of Catalysis By Hydrophobic
           Interactions
          Length = 319

 Score =  421 bits (1083), Expect = e-115,   Method: Composition-based stats.
 Identities = 135/320 (42%), Positives = 193/320 (60%), Gaps = 5/320 (1%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D L+ L  RG ++Q ++   L  L ++  VT Y G+D TA SLH GHL  ++ +   Q+ 
Sbjct: 2   DLLAELQWRGLVNQTTDEDGLRKLLNEERVTLYCGFDPTADSLHIGHLAGILTMRRFQQA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI+L+GG T +IGDPS +   R +   + ++    +IK     F+ +      A + 
Sbjct: 62  GHRPIALVGGATGLIGDPSGKKSERTLNAKETVEAWSARIKEQLGRFLDFEADGNPAKIK 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W+  +  I  LR++G  FSVN M++ ESV+SR+  E  +SF EF+YM+LQAYDF+ 
Sbjct: 122 NNYDWIGPLDVITFLRDVGKHFSVNYMMAKESVQSRI--ETGISFTEFSYMMLQAYDFLR 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK-LFALTSPLLTTASGTKMGKTLSGAI 245
           L +   CRLQ+GGSDQWGNI  G++L  + K     F LT PL+T A GTK GKT SG I
Sbjct: 180 LYETEGCRLQIGGSDQWGNITAGLELIRKTKGEARAFGLTIPLVTKADGTKFGKTESGTI 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIA 303
           WL+KE TSPY F+Q+W N DD DV+ + K  T L   EI+ + +   +  E   A+K +A
Sbjct: 240 WLDKEKTSPYEFYQFWINTDDRDVIRYLKYFTFLSKEEIEALEQELREAPEKRAAQKTLA 299

Query: 304 TEITTMVHGREEAEKAATAA 323
            E+T +VHG E   +A   +
Sbjct: 300 EEVTKLVHGEEALRQAIRIS 319


>gi|254796724|ref|YP_003081560.1| tyrosyl-tRNA synthetase [Neorickettsia risticii str. Illinois]
 gi|254589972|gb|ACT69334.1| tyrosyl-tRNA synthetase [Neorickettsia risticii str. Illinois]
          Length = 391

 Score =  421 bits (1082), Expect = e-115,   Method: Composition-based stats.
 Identities = 171/408 (41%), Positives = 263/408 (64%), Gaps = 21/408 (5%)

Query: 9   LSILSERGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           L I+ ERG+  Q ++   L+     G  +  Y+G+D TAS++H GHL  LML+  ++  G
Sbjct: 2   LKIIEERGYFLQCTDREALERRLHSGEKLVFYLGFDCTASAIHLGHLVPLMLMRLVKSYG 61

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+ I L+GGGT++IGDPS +D+SR+++  +EI +NI  I  I    I       +   +N
Sbjct: 62  HEVIILLGGGTTLIGDPSGKDKSRKILSREEINKNIGTISKIVKRII------GNVRFVN 115

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  I+YID LR +G  FS+NRML+F+SV+SRL RE  LSFLEFNYMILQAYDFVEL
Sbjct: 116 NADWLEDIRYIDFLRNVGRHFSINRMLTFDSVKSRLDRESHLSFLEFNYMILQAYDFVEL 175

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            + Y+C +Q+GG DQWGNI+ G++LG +L+  ++F LT PL+TTASG KMGKT +GA+WL
Sbjct: 176 NRLYNCNVQIGGGDQWGNIVNGVELGRKLRNTQMFGLTVPLITTASGKKMGKTEAGAVWL 235

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           + ++ SP+++WQY+RN +D+DV  F +  T LP+ +I  ++     +INE+KK++ATE T
Sbjct: 236 DADLYSPHDYWQYFRNTEDSDVERFLRLFTELPIDKIKTLSACDDAQINESKKVLATEAT 295

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
            + HG   AE+ + + ++ F+ +     +P I+I +     G  ++ ++++   A+S  +
Sbjct: 296 RICHGNAIAEEVSASIIKAFEEN-DPSQLPEIAIPR-----GSDIIDVVIRIEAASSRTQ 349

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK-NHIIC 414
           A+R ++S A+KI+   I    + +  Q         +S GKK  +II 
Sbjct: 350 AKRLIESGAVKIDKKKILTHSIDLPEQ-------FVVSVGKKQRNIIV 390


>gi|231099|pdb|4TS1|A Chain A, Crystal Structure Of A Deletion Mutant Of A Tyrosyl-TRNA
           Synthetase Complexed With Tyrosine
 gi|231101|pdb|4TS1|B Chain B, Crystal Structure Of A Deletion Mutant Of A Tyrosyl-TRNA
           Synthetase Complexed With Tyrosine
          Length = 319

 Score =  420 bits (1081), Expect = e-115,   Method: Composition-based stats.
 Identities = 136/320 (42%), Positives = 193/320 (60%), Gaps = 5/320 (1%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D L+ L  RG ++Q ++   L  L ++  VT Y G+D TA SLH GHL  ++ +   Q+ 
Sbjct: 2   DLLAELQWRGLVNQTTDEDGLRKLLNEERVTLYCGFDPTADSLHIGHLATILTMRRFQQA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI+L+GG T +IGDPS +   R +   + ++    +IK     F+ +      A + 
Sbjct: 62  GHRPIALVGGATGLIGDPSGKKSERTLNAKETVEAWSARIKEQLGRFLDFEADGNPAKIK 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W+  +  I  LR++G  FSVN M++ ESV+SR+  E  +SF EF+YM+LQAYDF+ 
Sbjct: 122 NNYDWIGPLDVITFLRDVGKHFSVNYMMAKESVQSRI--ETGISFTEFSYMMLQAYDFLR 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK-LFALTSPLLTTASGTKMGKTLSGAI 245
           L +   CRLQ+GGSDQWGNI  G++L  + K     F LT PL+T A GTK GKT SG I
Sbjct: 180 LYETEGCRLQIGGSDQWGNITAGLELIRKTKGEARAFGLTIPLVTKADGTKFGKTESGTI 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIA 303
           WL+KE TSPY F+Q+W N DD DV+ + K  T L   EI+ + +   +  E   A+K +A
Sbjct: 240 WLDKEKTSPYEFYQFWINTDDRDVIRYLKYFTFLSKEEIEALEQELREAPEKRAAQKTLA 299

Query: 304 TEITTMVHGREEAEKAATAA 323
            E+T +VHG E   +A   A
Sbjct: 300 EEVTKLVHGEEALRQAIRYA 319


>gi|21672404|ref|NP_660471.1| tyrosyl-tRNA synthetase [Buchnera aphidicola str. Sg (Schizaphis
           graminum)]
 gi|25009419|sp|Q8KA14|SYY_BUCAP RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|21623012|gb|AAM67682.1| tyrosyl-tRNA synthetase [Buchnera aphidicola str. Sg (Schizaphis
           graminum)]
          Length = 422

 Score =  420 bits (1081), Expect = e-115,   Method: Composition-based stats.
 Identities = 150/418 (35%), Positives = 228/418 (54%), Gaps = 9/418 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D ++ L +R  I  I+N  +L  L     ++ Y G+D T  SLH GHL  L+ L   Q  
Sbjct: 2   DLINELHQRNLIFHITNENKLKELIKNKYISLYCGFDPTEDSLHVGHLLPLITLKRFQVL 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKPI L+GG TS+IGDPSF+ + R +     +++   KI    S F+ + +    A++L
Sbjct: 62  GHKPIVLIGGATSLIGDPSFKTKERLLKSDSFVEKCTLKISQQISFFLDFNSNFNSAIIL 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDFV 185
           NN  W   I  +  LR++G +FSVN +++ E+V+ R+KR +Q +SF EF+Y +LQAYDF 
Sbjct: 122 NNNLWFKKINILQFLRDVGKYFSVNALINREAVKKRIKRSDQGISFTEFSYNLLQAYDFF 181

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L +     LQ+GGSDQWGNI  G+ L  R+   + + LT PLL  ++G K GKT SG +
Sbjct: 182 ILNQKNQVSLQIGGSDQWGNISSGMHLIHRISKKEAYGLTLPLLMQSNGIKFGKTESGTV 241

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIA 303
           WL+ + T+PY F+Q+W NI+D++V  F K  T + + EI+   K   +  +I   K ++A
Sbjct: 242 WLDPQKTTPYRFYQFWMNIEDSNVYRFLKLFTFIDIHEINEREKNSYKKNQIVSDKVLLA 301

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRGMGLLTLIV 357
             +T +VHG E+   A       F  +I+   +  +       +   E  +   L   +V
Sbjct: 302 KHMTRLVHGDEKLSAAERITNILFFKNINDIQISDLEQLRKDGVPVVETYKIKDLQEALV 361

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            +  A S  +A+  + SN+I IN   I N+   I   D        LS GKKNH + +
Sbjct: 362 LSSLAQSRTQAKNMIISNSISINTKKIVNKNYIIDDNDKLFNQFTLLSRGKKNHCLIY 419


>gi|28493136|ref|NP_787297.1| tyrosyl-tRNA synthetase [Tropheryma whipplei str. Twist]
 gi|28572750|ref|NP_789530.1| tyrosyl-tRNA synthetase [Tropheryma whipplei TW08/27]
 gi|81437905|sp|Q83GS7|SYY_TROWT RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|81629794|sp|Q83HH5|SYY_TROW8 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|28410883|emb|CAD67268.1| tyrosyl-tRNA synthetase [Tropheryma whipplei TW08/27]
 gi|28476176|gb|AAO44266.1| tyrosyl-tRNA synthetase [Tropheryma whipplei str. Twist]
          Length = 471

 Score =  420 bits (1081), Expect = e-115,   Method: Composition-based stats.
 Identities = 138/464 (29%), Positives = 220/464 (47%), Gaps = 57/464 (12%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +     L  RG +   ++   L  L     +  Y G+D TA SLH G+L Q++++  LQ 
Sbjct: 8   NSVWDELLWRGLVCVSTDQGALKELLDGPPIRFYCGFDPTAPSLHVGNLAQILIMRRLQL 67

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+PI+L+GG T +IGDP    E R++   +++QE +  ++   S F+ +  G   A++
Sbjct: 68  AGHRPIALVGGSTGLIGDPRPGGE-RQLHSHEQVQEWVRALQQQLSRFLDF-KGAAAAVL 125

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  W  S+  +D LRE+G  F VN ML  ++V +RL   + +S+ EF+Y ILQ+ DF 
Sbjct: 126 VNNLDWTKSLTALDFLRELGKHFRVNAMLKKDAVAARLSSTEGISYTEFSYQILQSLDFR 185

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           +L  +Y C LQ+GGSDQWGNI  G+DL  + +   + A  SPLLT + G+K GKT   AI
Sbjct: 186 QLYLDYKCVLQIGGSDQWGNITSGVDLIRKTEGAGVHAFGSPLLTASDGSKFGKTEGNAI 245

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIA 303
           WL+ ++TSP++F+Q++ N DDAD+    +  T    SEI+ + +   +      A + +A
Sbjct: 246 WLDADLTSPWSFYQFFLNSDDADIPRLLRVFTFFTRSEIEDLNRSVRENASARLAHRHLA 305

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIH----SQHMPTI-------------------- 339
             +T +VHG + A++   A    F            +P I                    
Sbjct: 306 YSVTRLVHGADVADQVLLACSVLFGDGGALGKTQTGLPRIDSDTLNDSSGVTTIKAQDNT 365

Query: 340 ---------------------------SISKDEVSRGMGLLTLIVKAGFATSTNEARRHL 372
                                       +    VS    +  ++ K G   S +EARR +
Sbjct: 366 YTPYSPEGVRFAGTFPVDPRFLRSILFELPNATVSAHDLITHILQKVGLCRSLSEARRLI 425

Query: 373 KSNAIKINNSIISNEKLQIK--LQDFDSTGNIKLSFGKKNHIIC 414
               I +NN  ++     +   L +        L  GKK+    
Sbjct: 426 SQGGIYVNNIKVTCPDALLDSFLDNSMPIRAAILRKGKKHLAAV 469


>gi|329350575|gb|AEB91324.1| tyrosyl-tRNA synthetase [Sporolactobacillus sp. P3J]
          Length = 388

 Score =  420 bits (1080), Expect = e-115,   Method: Composition-based stats.
 Identities = 131/383 (34%), Positives = 199/383 (51%), Gaps = 15/383 (3%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
            T  S+H GHL   M++   +  GH P  L+GG T  IGDPS R   R++   +++  N+
Sbjct: 9   PTGDSMHIGHLIPFMMMKRFELAGHHPYILIGGATGSIGDPSGRKTERQLQAMEKVNHNV 68

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL 163
           + +            G  +  M+NN  WL  +  +D LR+ G   +VN ML+ + V SRL
Sbjct: 69  KALSAQMKRLF---GGDANVTMVNNYEWLSKVSLLDFLRDYGKVVNVNTMLAKDIVASRL 125

Query: 164 KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKL 221
             E  +S+ EF Y ILQ+ DF+ L + +  +LQ+GG+DQWGNI  GID+  +++    + 
Sbjct: 126 --EDGISYTEFTYQILQSVDFLTLHRVHHVQLQIGGADQWGNITSGIDMIHKIEGSDTEA 183

Query: 222 FALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPM 281
           + LT PL+  A GTK GKT  GAIWL+ + TSPY F+Q+W N DD DVV   K  T L  
Sbjct: 184 YGLTIPLMLKADGTKFGKTAGGAIWLDPKKTSPYEFYQFWLNQDDRDVVKNLKFFTFLSQ 243

Query: 282 SEIDRMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI 339
            EI  +A+      E  EA++ +A E+T  VHG+E   KA   +   F   I    +  I
Sbjct: 244 DEIGELAQKVETEPEKREAQRRLAEEVTRFVHGQEAMNKAEKISDTLFSGDIKDLSVAEI 303

Query: 340 SISKDEV------SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL 393
             + + V      S    ++  +V      S  +AR  L + A+ IN   ++N + ++  
Sbjct: 304 QEAFERVPNVKVSSEPKNIVEWLVDTKIEPSKRQAREDLINGAVTINGDRVTNVEAEVNP 363

Query: 394 QDFDSTGNIKLSFGKKNHIICHL 416
            D  +   I +  GKKN+ +  +
Sbjct: 364 ADHYAGKFIVVRKGKKNYFLARV 386


>gi|60593716|pdb|1VBN|A Chain A, Escherichia Coli Tyrosyl-Trna Synthetase Mutant Complexed
           With Tyr-Ams
 gi|60593717|pdb|1VBN|B Chain B, Escherichia Coli Tyrosyl-Trna Synthetase Mutant Complexed
           With Tyr-Ams
          Length = 318

 Score =  419 bits (1079), Expect = e-115,   Method: Composition-based stats.
 Identities = 136/319 (42%), Positives = 195/319 (61%), Gaps = 5/319 (1%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L ERG + Q+++   L    +QG +    G+D TA SLH GHL  L+ L   Q+ 
Sbjct: 1   NLIKQLQERGLVAQVTDEEALAERLAQGPIALVCGFDPTADSLHLGHLVPLLCLKRFQQA 60

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP++L+GG T +IGDPSF+   R++   + +QE ++KI+   + F+ +  G+  A+  
Sbjct: 61  GHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDCGENSAIAA 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDFV 185
           NN  W  ++  +  LR+IG  FSVN+M++ E+V+ RL RE Q +SF EF+Y +LQ YDF 
Sbjct: 121 NNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNREDQGISFTEFSYNLLQGYDFA 180

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L K Y   L +GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA+
Sbjct: 181 CLNKQYGVVLCIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGAV 240

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKII 302
           WL+ + TSPY F+Q+W N  DADV  F K  T + + EI   +   K  GK    A+ ++
Sbjct: 241 WLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINALEEEDKNSGKAPR-AQYVL 299

Query: 303 ATEITTMVHGREEAEKAAT 321
           A ++T +VHG E  + A  
Sbjct: 300 AEQVTRLVHGEEGLQAAKR 318


>gi|119115583|ref|XP_311148.3| tyrosyl-tRNA synthetase (AGAP000012-PA) [Anopheles gambiae str.
           PEST]
 gi|116130907|gb|EAA06615.3| tyrosyl-tRNA synthetase (AGAP000012-PA) [Anopheles gambiae str.
           PEST]
          Length = 463

 Score =  419 bits (1077), Expect = e-115,   Method: Composition-based stats.
 Identities = 131/435 (30%), Positives = 216/435 (49%), Gaps = 25/435 (5%)

Query: 5   KSDFLSILSERGFIHQISNPRELDI---LCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
           + + L  L +RGFI  +     +D    +      T Y G+D TA+SLH G+L  L+ L 
Sbjct: 27  ERNILK-LRDRGFIQDVFPAETIDKASSMLGSTCQTVYAGFDPTANSLHVGNLLVLIGLL 85

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSS--------F 113
             Q+ GH+PI+L+GG T +IGDPS R   R+ + ++ ++ N+  I+    +        F
Sbjct: 86  HTQRAGHQPIALVGGATGLIGDPSGRKTERQQLETEAVEHNVTCIRRQIETIFANHERFF 145

Query: 114 IKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLE 173
               +     L++NN  W     ++D +  +G  F +  MLS  SV++RL  E  +SF E
Sbjct: 146 WDRPSSLKPVLVVNNADWYRQYSFVDFMANVGRHFRMGAMLSRSSVQTRLTSESGMSFTE 205

Query: 174 FNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTAS 233
           F+Y + QAYD++ L + ++CR Q+GGSDQ GNI+ G +L  R    ++F LT PL+T   
Sbjct: 206 FSYQLFQAYDWLHLLRQHNCRFQLGGSDQMGNIMSGQELISRTDGKEVFGLTLPLVTNEE 265

Query: 234 GTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG- 292
           G K GK+   A+WL+ + TSPY  +Q++    D++V    + LT LP+  I++       
Sbjct: 266 GDKFGKSAGNAVWLSDDRTSPYAMYQFFVRTPDSEVEKLLRLLTFLPVQTIEQAMARHRR 325

Query: 293 -KEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI----------SI 341
             E+ EA+K++A E+T +VHG     KA   +   ++  + +     +           +
Sbjct: 326 TPELWEAQKLLAGELTKLVHGEAGLYKAMAISRALYNGDLSTLEQLEVRDVAQSFGGAPL 385

Query: 342 SKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ-DFDSTG 400
            +     GM +L + ++A    S  +A R + +    IN     N    +       S  
Sbjct: 386 CEILPEPGMTVLDVALRARCFPSRADAERIIGAGGFSINLKKAKNPAEVLSPSVHILSNR 445

Query: 401 NIKLSFGKKNHIICH 415
              L  GK+N+ I  
Sbjct: 446 ISLLRVGKRNYYIVK 460


>gi|313665522|ref|YP_004047393.1| tyrosine--tRNA ligase [Mycoplasma leachii PG50]
 gi|312949275|gb|ADR23871.1| tyrosine--tRNA ligase [Mycoplasma leachii PG50]
          Length = 414

 Score =  418 bits (1075), Expect = e-115,   Method: Composition-based stats.
 Identities = 148/422 (35%), Positives = 220/422 (52%), Gaps = 18/422 (4%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
            K+  L  L  RG I QI+N  ++    +      Y G+D TA SLH GHL  ++ L   
Sbjct: 1   MKNSILEELKWRGLIKQITNESKILDAQNNND-AVYCGFDPTADSLHVGHLMMIITLKRF 59

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
              G KPI+L+GG T +IGDPSF+   R +   Q++  NI KI       I         
Sbjct: 60  ALQGFKPIALIGGATGMIGDPSFKANERALQTKQQVDHNINKISAQLKEII------PTV 113

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
             +NN  WL +I  ID LR IG  F+++ +L+ ES+ +R+  +  LS  EF Y +LQA+D
Sbjct: 114 SFVNNRDWLENISLIDFLRGIGKHFNLSYLLAKESIATRV--QTGLSVTEFCYTMLQAFD 171

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERL--KTPKLFALTSPLLTTASGTKMGKTL 241
           F  L KN +C +Q+GGSDQWGNI  GID       K  K   +T  LLT + G K GKT 
Sbjct: 172 FYYLYKNNNCSIQIGGSDQWGNITSGIDFISDTVNKNNKAAGVTINLLTKSDGQKFGKTE 231

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAK 299
           SGA+WL+K  TS Y F+Q+W N  D D ++  K LT L   +I+++ K   ++      +
Sbjct: 232 SGAVWLDKSKTSEYEFYQFWINQTDEDSINLLKCLTFLTKDQIEQLIKQHNQQPSKRLLQ 291

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQ-----HMPTISISKDEVSRGMGLLT 354
           K +A+E+T  VH ++  +KA       F  ++ S       M   S+   ++++   ++ 
Sbjct: 292 KTLASEMTKFVHQQQGLDKALKLTEAFFSGNLFSLTDDLFKMALNSLPNTQINKTTKVID 351

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +++   A+S  EAR  L + AI INN II +E   I   D      + +  GKK + + 
Sbjct: 352 ALIEVKAASSKREAREFLTNKAIMINNQIIEDENTLISSFDLIQNKYLLVKKGKKKYFVI 411

Query: 415 HL 416
            +
Sbjct: 412 LI 413


>gi|195120199|ref|XP_002004616.1| GI19509 [Drosophila mojavensis]
 gi|193909684|gb|EDW08551.1| GI19509 [Drosophila mojavensis]
          Length = 464

 Score =  418 bits (1074), Expect = e-114,   Method: Composition-based stats.
 Identities = 134/444 (30%), Positives = 219/444 (49%), Gaps = 32/444 (7%)

Query: 4   FKSDF----LSILSERGFIHQISNPRE---LDILCSQGVVTAYIGYDLTASSLHAGHLTQ 56
           FK +F    L  LS+RGF   I        +  L ++   + Y G+D TA SLH G+L  
Sbjct: 19  FKRNFTHKNLLELSDRGFFQSIFPDTAAPRIKQLFTKSSQSIYAGFDPTADSLHVGNLLV 78

Query: 57  LMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK- 115
           +M L   Q+ GHKPI+L+GG T +IGDPS R   R  +    I+ N++ I+G      K 
Sbjct: 79  IMGLLHCQRAGHKPIALVGGATGLIGDPSGRKTERNQLGQSVIETNLQAIEGQLRRVFKN 138

Query: 116 ----YGTGKTDA------LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR 165
                   + +        ++NN  W  ++  ID +  +G  F +  MLS  SV++RL+ 
Sbjct: 139 HEDCLWDTRNNKSQLAPLTIVNNAEWYANLNLIDFIANMGRHFRMGSMLSRSSVQTRLES 198

Query: 166 EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLG-ERLKTPKLFAL 224
           E  +SF EF Y I QAYD++ L + ++C  QMGGSDQ GN++ G +L     +  ++F L
Sbjct: 199 EDGMSFTEFTYQIFQAYDWLHLLRKHNCCFQMGGSDQMGNLMTGHELISRVERNREVFGL 258

Query: 225 TSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI 284
           T P++T   G K GK+   A+WL++  TSP+  +Q++  + D++V    K  T +P++E+
Sbjct: 259 TLPIVTNEEGDKFGKSAGNAVWLDESKTSPFALYQFFLRMPDSEVEKLLKLFTFIPLAEV 318

Query: 285 DRMAKLQGKEI--NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSI----------H 332
           D++ +   KE    +A+ ++A ++T +VHG    ++A       +  ++           
Sbjct: 319 DQLMREHAKEPEKRKAQTLLAEDVTLLVHGEHGLKQAERVTNALYKGNVDGLAELNYEEI 378

Query: 333 SQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
            Q     ++       GM +L L +KA    + ++A R + +    IN   + N    I 
Sbjct: 379 KQTFQGATVVDLLTEPGMSILQLAMKAKCFPTESDAVRIISAGGFYINQKRVQNIAEVIT 438

Query: 393 LQ-DFDSTGNIKLSFGKKNHIICH 415
                   G   L  GK+N  I  
Sbjct: 439 TGIHILRNGVSLLRVGKRNFYIVR 462


>gi|213018657|ref|ZP_03334465.1| tyrosyl-tRNA synthetase [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
 gi|212995608|gb|EEB56248.1| tyrosyl-tRNA synthetase [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
          Length = 363

 Score =  417 bits (1073), Expect = e-114,   Method: Composition-based stats.
 Identities = 178/360 (49%), Positives = 250/360 (69%), Gaps = 1/360 (0%)

Query: 58  MLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG 117
           M+L  LQK G+KPI L+GGGT+ IGDPS +D++R ++  ++I +NI  IK      I + 
Sbjct: 1   MMLRHLQKFGYKPIVLLGGGTTKIGDPSGKDKARSVLPIEDINQNILGIKKTLEKMISFD 60

Query: 118 TGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYM 177
            GKT A+++NN  WL +IKYID LR+IG+ FSVNRML F+SV+ RL REQ+LSFLEFNYM
Sbjct: 61  YGKTGAIIVNNADWLDNIKYIDFLRDIGTHFSVNRMLGFDSVKIRLDREQNLSFLEFNYM 120

Query: 178 ILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
           +LQAYDFVEL K Y CR Q+GGSDQWGNI+ GI+L ++L  P+LF LT+PLL  A G KM
Sbjct: 121 LLQAYDFVELNKKYGCRFQIGGSDQWGNIVNGIELSKKLNLPELFGLTTPLLLNAQGKKM 180

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE 297
           GKT SGA+WL+  M + Y++WQY+RN+DD DV  F +  T LP+ EI ++  L+ +E NE
Sbjct: 181 GKTESGAVWLDGSMLNSYDYWQYFRNVDDQDVGRFLRLFTDLPIDEIKKLESLKDQETNE 240

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
           AKK++ATE+T + HG +EAE A +AA+  F+ +  S  +   +I+K++++ G+ L+ L+ 
Sbjct: 241 AKKVLATEVTKICHGCKEAELARSAAISAFE-NEDSSLLSGYTITKEQIANGIPLIDLLY 299

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
             GF  S   A+R ++ N  K+N++ I++    I  + F     IKLS GKK HI   + 
Sbjct: 300 DTGFEPSKGAAKRLIQGNGCKVNDNTINDVNYTINSESFKGQPFIKLSAGKKRHIKILVS 359


>gi|86141675|ref|ZP_01060199.1| tyrosyl-tRNA synthetase [Leeuwenhoekiella blandensis MED217]
 gi|85831238|gb|EAQ49694.1| tyrosyl-tRNA synthetase [Leeuwenhoekiella blandensis MED217]
          Length = 378

 Score =  416 bits (1071), Expect = e-114,   Method: Composition-based stats.
 Identities = 133/378 (35%), Positives = 208/378 (55%), Gaps = 22/378 (5%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           ++F+  L  RG IH +    E      + + +AY+G D TA SLH GHL  +M+L   Q 
Sbjct: 3   TNFVEELQWRGMIHDVMPGTE--EHLMEQMRSAYVGIDPTADSLHIGHLVGVMMLKHFQA 60

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
           +GH+PI+L+GG T +IGDPS + + R ++    ++ N E IK   S F+ + + + +A +
Sbjct: 61  SGHRPIALVGGATGMIGDPSGKSDERNLLDEDTLRHNQEAIKEQLSRFLDFDSDEENAAV 120

Query: 126 -LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQAY 182
            +NN  W+    +++ +R++G   +VN M++ +SV+ RL  E  + +SF EF Y ++Q Y
Sbjct: 121 LVNNYDWMKDFSFLEFIRDVGKHITVNYMMAKDSVKKRLSAESAEGMSFTEFTYQLVQGY 180

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DF+ L +  +  LQMGGSDQWGNI  G +L  R+   K +A+T PL+T A GTK GKT  
Sbjct: 181 DFLHLYREKELTLQMGGSDQWGNITTGTELVRRIGGGKAYAMTCPLITKADGTKFGKTAG 240

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKK 300
           G IWL+ E TSPY F+QYW N  D D   + K  T L   EI+ +     +  ++   +K
Sbjct: 241 GNIWLDAERTSPYRFYQYWLNTSDEDAAKYIKIFTFLGKEEIENLIAEHQEAPHQRALQK 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHS--------------QHMPTISISKDEV 346
            +A E+T   HG E  E A  A+   F  S  +                +P   +S+ E+
Sbjct: 301 RLAEEVTISTHGVENYENAVKASEILFGKSTAANLKALNEKTFLDVFDGVPQAEVSRGEI 360

Query: 347 SRGMGLLTLIVK-AGFAT 363
             G+ +++ + +  GF  
Sbjct: 361 EAGLDMVSALAEKTGFLK 378


>gi|195380215|ref|XP_002048866.1| GJ21079 [Drosophila virilis]
 gi|194143663|gb|EDW60059.1| GJ21079 [Drosophila virilis]
          Length = 464

 Score =  416 bits (1070), Expect = e-114,   Method: Composition-based stats.
 Identities = 135/444 (30%), Positives = 217/444 (48%), Gaps = 32/444 (7%)

Query: 4   FKSDF----LSILSERGFIHQI---SNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQ 56
           FK +     L  LSERGF   I   +   +L  L  +   T Y G+D TA SLH G+L  
Sbjct: 19  FKRNLTHKNLLELSERGFFQSIFPDTAAPKLKELFERSAQTIYAGFDPTADSLHVGNLLV 78

Query: 57  LMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK- 115
           +M L   Q+ GHKPI+L+GG T +IGDPS R   R  +    +  N++ I+       K 
Sbjct: 79  IMGLLHCQRAGHKPIALVGGATGLIGDPSGRKTERNQLGESVLDANLQAIERQLRKVFKN 138

Query: 116 -----YGTGKTDAL-----MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR 165
                + T K  +      ++NN  W  ++  ID +  +G  F +  MLS  SV+SRL+ 
Sbjct: 139 HEDCLWDTRKNRSPLAPLTIVNNAEWYANLNLIDFVANMGRHFRMGSMLSRSSVQSRLES 198

Query: 166 EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLG-ERLKTPKLFAL 224
           E  +SF EF Y I QAYD++ L + ++C  QMGGSDQ GN++ G +L     +  ++F +
Sbjct: 199 EDGMSFTEFTYQIFQAYDWLHLLRKHNCCFQMGGSDQMGNLMTGHELISRVERNREVFGM 258

Query: 225 TSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI 284
           T P++T   G K GK+   A+WL++  TSP+  +Q++  + D++V    K  T +P+ E+
Sbjct: 259 TLPIVTNEEGDKFGKSAGNAVWLDENKTSPFALYQFFLRMPDSEVEKLLKLFTFIPLPEV 318

Query: 285 DRMAKLQGKEI--NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSI----------H 332
           +++ +   KE    +A+ ++A ++T +VHG    ++A       +  ++           
Sbjct: 319 EQLMREHAKEPEKRKAQTLLAEDVTLLVHGEHGLKQAERVTNALYKGNVDGLAELNYAEI 378

Query: 333 SQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
            Q     ++       GM +L L +KA    +  +A R + +    IN   + N    I 
Sbjct: 379 KQTFQGAAVVDILTEPGMSILQLAMKAKCFPTETDAVRIINAGGFYINQKRVQNIAEVIT 438

Query: 393 LQ-DFDSTGNIKLSFGKKNHIICH 415
                   G   L  GK+N  I  
Sbjct: 439 TGIHILRNGVSLLRVGKRNFYIVR 462


>gi|113461450|ref|YP_719519.1| tyrosyl-tRNA synthetase [Haemophilus somnus 129PT]
 gi|170718444|ref|YP_001783661.1| tyrosyl-tRNA synthetase [Haemophilus somnus 2336]
 gi|112823493|gb|ABI25582.1| tyrosyl-tRNA synthetase [Haemophilus somnus 129PT]
 gi|168826573|gb|ACA31944.1| tyrosyl-tRNA synthetase [Haemophilus somnus 2336]
          Length = 395

 Score =  416 bits (1070), Expect = e-114,   Method: Composition-based stats.
 Identities = 108/419 (25%), Positives = 188/419 (44%), Gaps = 28/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M    +  ++ L  RG  H  S    ++ L     +   +G D TA  +H GH   L  L
Sbjct: 1   MTNINT-VIAELK-RGVDHVFSEQDFIEKLKENRPLRIKLGADPTAPDIHLGHTVVLNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GH+ I L+G  T+ +GDPS ++ +R  +  +++  N E  K      +     +
Sbjct: 59  RQFQNFGHEVIFLIGDFTATVGDPSGKNTTRPPLSREDVLRNAETYKTQIFKILDPQKTQ 118

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               ++ N  WL  +  I ++R + S ++V RML  +  + R    Q ++  EF Y +LQ
Sbjct: 119 ----VVFNSDWLGKLGTIGMIR-LASNYTVARMLERDDFKKRFNNNQPIAIHEFIYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGK 239
            +D V L    +  +++GG+DQ  N++ G +L +        A+T PLL    G  KM K
Sbjct: 174 GHDSVHL----EADVELGGTDQTFNLLMGRELQKSCGQKPQVAITMPLLVGLDGEKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINE 297
           +L   I + +   +P N +    +I D  +  +   L+  P++EI ++ K    G+   +
Sbjct: 230 SLGNYIGVTE---TPSNMFGKIMSISDELMWDWYNLLSFRPLTEITQLKKDVENGRNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A EI T  H  ++A+ A    ++ F        MP  + + +     +GL  L+ 
Sbjct: 287 VKILLAKEIITRFHSADDADTAEQEFIDRFQKGAIPDDMPEFTFTGE-----IGLANLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            AG   ST+EA R ++   +KIN   + N KL +               GK+      +
Sbjct: 342 DAGLVGSTSEAIRMVQQGGVKINGEKVDNAKLIVSPS------TAVYQVGKRKFARVTI 394


>gi|220935571|ref|YP_002514470.1| tyrosyl-tRNA synthetase [Thioalkalivibrio sp. HL-EbGR7]
 gi|219996881|gb|ACL73483.1| tyrosyl-tRNA synthetase [Thioalkalivibrio sp. HL-EbGR7]
          Length = 400

 Score =  416 bits (1069), Expect = e-114,   Method: Composition-based stats.
 Identities = 107/421 (25%), Positives = 188/421 (44%), Gaps = 26/421 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLML 59
           MP F SD L  L  RG  H+I    EL      G  +    G+D TA  LH GH   L  
Sbjct: 1   MPGF-SDQLD-LIRRGS-HEILLEDELKQRLESGRPLRIKAGFDPTAPDLHLGHTVLLNK 57

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG 119
           L   Q  GH+ I L+G  T +IGDP+ +  +R  +   E+ +N    +G     +     
Sbjct: 58  LRQFQDLGHEAIFLIGDFTGMIGDPTGKSATRPPLTRDEVIDNARTYEGQIFKILD---- 113

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
               L++ N +W+  +   D+++      +V RML  +    R    Q ++  EF Y ++
Sbjct: 114 PEKTLVMFNSSWMGEMSSADMIQLAAKH-TVARMLERDDFHKRYSSGQPIAIHEFLYPLV 172

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMG 238
           Q YD V L  +    +++GG+DQ  N++ G +L +    P    +T P+L    G  KM 
Sbjct: 173 QGYDSVALKAD----VELGGTDQKFNLLVGRELQKHYGQPPQVVMTMPILEGLDGVQKMS 228

Query: 239 KTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEIN 296
           K+L   I +N+   +P   +    ++ D  +  + + L+  PM +I+  R     G+   
Sbjct: 229 KSLGNYIGINE---APDEMFGKLMSVSDELMWRYFELLSFRPMQDIEVFRDRIAAGENPR 285

Query: 297 EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLI 356
           + K ++  E+    HG   A +     ++ F      + +P ++++    S G+ L  L+
Sbjct: 286 DIKFLLGEELVERFHGARAAGEVRGRFIDRFQKGAMPEDIPGVTVAAP--SDGLPLPNLL 343

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            +AG   ST+EA R ++  A++ +   + +  L+     F++        GK+      L
Sbjct: 344 KEAGLVGSTSEAMRMIRQGAVRRDGERVEDPGLK-----FEAGSEAVYQVGKRRFARVRL 398

Query: 417 C 417
            
Sbjct: 399 V 399


>gi|309775624|ref|ZP_07670624.1| tyrosine--tRNA ligase [Erysipelotrichaceae bacterium 3_1_53]
 gi|308916718|gb|EFP62458.1| tyrosine--tRNA ligase [Erysipelotrichaceae bacterium 3_1_53]
          Length = 405

 Score =  415 bits (1068), Expect = e-114,   Method: Composition-based stats.
 Identities = 136/408 (33%), Positives = 211/408 (51%), Gaps = 20/408 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG I+ +++   L+   + G +T YIG D T  SLH GH + L+    L++ G
Sbjct: 3   LFDELKYRGLINDVTSLE-LEEKLNNGGLTFYIGTDPTGDSLHIGHYSSLLCAKRLKEHG 61

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H PI L+GG T  IGDP    E R M+  + ++ N + +         +        M+N
Sbjct: 62  HHPIMLVGGATGFIGDPKASGE-RNMLTKEVLEHNYQCLSKQIEELFGFE-------MVN 113

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W   I  ID LR+ G +F+V+ M++ E+V+ RL     +S+ EF+YMILQA DF+ L
Sbjct: 114 NLDWTKDISVIDFLRDYGKYFNVSYMINKETVKRRLDA--GISYTEFSYMILQALDFLHL 171

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKL--FALTSPLLTTASGTKMGKTLSGAI 245
            ++  C LQ+GG DQWGNI  G++L  +    ++  + LT PL+T A GTK GK+ SG +
Sbjct: 172 YEDKGCTLQLGGQDQWGNITSGLELIRKKHGAEVECYGLTMPLITKADGTKFGKSESGTV 231

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIA 303
           WL+K+ TS Y  +Q+  N +D  V+ + K+LT L   EID + +    E    EA+K +A
Sbjct: 232 WLDKKKTSAYEMYQFLVNSEDEKVIDYLKKLTFLSKEEIDALEEKVKTEPHFREAQKTLA 291

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS-----ISKDEVSRGMGLLTLIVK 358
            E+ T +HG EE  KA       F  +I       +          ++   + L   +V+
Sbjct: 292 KEVVTFLHGEEEYNKALKITNALFKGNIRDLDAGELHDALKGFEAAKIDDALTLTDTLVQ 351

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
           AG A+S  EAR  +   +I++N   I + +  +   +  S G   +  
Sbjct: 352 AGIASSKREAREWINQGSIQVNGDKIKDVEFIVSSANAISEGRTLIKR 399


>gi|219681496|ref|YP_002467881.1| tyrosyl-tRNA synthetase [Buchnera aphidicola str. 5A (Acyrthosiphon
           pisum)]
 gi|257471177|ref|ZP_05635176.1| tyrosyl-tRNA synthetase [Buchnera aphidicola str. LSR1
           (Acyrthosiphon pisum)]
 gi|254783576|sp|B8D8S2|SYY_BUCA5 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|219624339|gb|ACL30494.1| tyrosyl-tRNA synthetase [Buchnera aphidicola str. 5A (Acyrthosiphon
           pisum)]
          Length = 422

 Score =  415 bits (1068), Expect = e-114,   Method: Composition-based stats.
 Identities = 160/423 (37%), Positives = 229/423 (54%), Gaps = 12/423 (2%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  F  +F+S L  RG I  I+N   L  L     ++ Y G+D T  SLH GHL  L++L
Sbjct: 1   MSEF--NFISRLHNRGLISHITNEDNLSKLIENKSISLYCGFDPTEESLHIGHLLPLIML 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GH+PI L+GG TS+IGDPSF+++ R    +  +    EKI    S F+ +  GK
Sbjct: 59  KRFQIAGHRPIILIGGATSLIGDPSFKEKERVFNSNYNVNIWTEKITKQISCFLDFNCGK 118

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMIL 179
             A++LNN TW   I  +  LR++G +FSVN M++  +V+ R+ R +Q +SF EF+Y +L
Sbjct: 119 NSAVLLNNNTWFKQINILSFLRDVGKYFSVNTMINRAAVKQRITRPDQGISFTEFSYNLL 178

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK 239
           QAYDF  L + Y   LQ+GG+DQWGNI  G+ L  R     ++ LT PLL  ++G K GK
Sbjct: 179 QAYDFFILNQQYQVDLQIGGADQWGNISSGMHLIHRKTKRVVYGLTVPLLIQSNGIKFGK 238

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINE 297
           T SG +WL+   TSPY F+Q+W NI+DA+V  F K  T + +SEI+++ K +    +I  
Sbjct: 239 TESGTVWLDSNKTSPYKFYQFWMNIEDANVYYFLKLFTFIKVSEINKLEKNKNIKNQIIN 298

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSI------HSQHMPTISISKDEVSRGMG 351
            K ++A  IT +VHG+E+   A       F  +         Q +    I   EVS    
Sbjct: 299 DKSLLAKHITQLVHGKEKLLAAERITKFLFLKNTTHIEESDLQQLKQDGIPFIEVSNVKD 358

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           L   +V    A S  +A+  + SN+I IN   I  +      +D        LS GKK H
Sbjct: 359 LQEALVLTSLAQSRTQAKNMIISNSISINTEKIR-KNHIFHEKDKLFGKFTLLSRGKKQH 417

Query: 412 IIC 414
            + 
Sbjct: 418 SLL 420


>gi|161833674|ref|YP_001597870.1| tyrosyl-tRNA synthetase [Candidatus Sulcia muelleri GWSS]
 gi|152206164|gb|ABS30474.1| tyrosyl-tRNA synthetase [Candidatus Sulcia muelleri GWSS]
          Length = 433

 Score =  415 bits (1067), Expect = e-114,   Method: Composition-based stats.
 Identities = 148/433 (34%), Positives = 229/433 (52%), Gaps = 24/433 (5%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  F  + +  L  RG IH  +   ++       ++T Y G+D T  SLH G+L  +++L
Sbjct: 1   MNNFNLNLIQELLWRGLIHDTTYSEQIK----NEIITLYTGFDPTYKSLHIGNLVAIIML 56

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              QK+G+  IS++GGGT +IGDPS ++  R + + + +  NI  +K   S +I +   K
Sbjct: 57  IHFQKSGNNIISVIGGGTGMIGDPSGKNCERILKKKELLYNNIFYLKKQLSLYIDFNYPK 116

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
            +  +LNN  WL    +I+  R+IG +F++N ML+ +S++ R+    S+SF EF Y +LQ
Sbjct: 117 NE--ILNNYEWLKKKLFIEFARDIGKYFTINYMLTKDSIKRRISNNNSISFTEFTYQLLQ 174

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDF+ L K  +C LQ+GGSDQWGNI  GI+L  +    K+  LT PL+T   G+K GKT
Sbjct: 175 AYDFIYLYKEKNCSLQIGGSDQWGNITSGIELIRKKLGVKVNGLTFPLITKLDGSKFGKT 234

Query: 241 LSG-AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NE 297
            +G  IW++  +TSPY F+Q+W NI D     + K  T L   EI  +      +     
Sbjct: 235 ENGENIWIDPNLTSPYEFYQFWINISDEQAKKYIKIYTFLKKEEIKEIIFYHENDPKLKL 294

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMS------------IHSQHMPTISISKDE 345
            +K +A+EIT  +HG++  EK    +   F+                 +++P   I    
Sbjct: 295 IQKKLASEITIFIHGKKTFEKIKFISNILFNKKKIINEINKNYIIFIYKNIPHKKIYIYH 354

Query: 346 VSRGMGLLTLIV-KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
            +  + ++ L+V K+ F  S  EA R LK N+I IN   I +EK  +   D  S   + L
Sbjct: 355 -NFNIPIIDLLVNKSKFLKSKKEAIRQLKLNSIYINKKNI-DEKFILNKNDLISGTYVLL 412

Query: 405 SFGKKNHIICHLC 417
             GKKN  +  + 
Sbjct: 413 QKGKKNFFMIKIV 425


>gi|329850515|ref|ZP_08265360.1| tyrosyl-tRNA synthetase [Asticcacaulis biprosthecum C19]
 gi|328840830|gb|EGF90401.1| tyrosyl-tRNA synthetase [Asticcacaulis biprosthecum C19]
          Length = 370

 Score =  415 bits (1067), Expect = e-114,   Method: Composition-based stats.
 Identities = 168/368 (45%), Positives = 238/368 (64%), Gaps = 10/368 (2%)

Query: 58  MLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG 117
           M+L WLQKTGHKPI LMGGGT+ +GDPS +D  R+++   +I EN+  IK +F+ F+ + 
Sbjct: 1   MMLRWLQKTGHKPIVLMGGGTTKVGDPSGKDTQRQLLDDAKIAENLNGIKQVFTKFLTFE 60

Query: 118 ------TGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSF 171
                 T    A+M+NN+ WL    YI+ LR  G  F++NRM++F+SV+ RL+REQ L+F
Sbjct: 61  SVQGGHTDSNAAIMVNNDDWLSQYGYIEFLRTFGPHFTINRMMTFDSVKLRLEREQPLTF 120

Query: 172 LEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK----TPKLFALTSP 227
           LEFNYM++QA DF EL    +C LQMGGSDQWGNII G++L  R+         F LT+P
Sbjct: 121 LEFNYMLMQAVDFRELNLRQNCVLQMGGSDQWGNIINGVELTRRMGEGREGAHAFGLTTP 180

Query: 228 LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM 287
           LLT+ASG KMGKT SGA+WLN ++ SPY++WQYWRN +D DV  F +  T LP+ EI R+
Sbjct: 181 LLTSASGAKMGKTASGAVWLNADLLSPYDYWQYWRNAEDKDVGRFLRLFTELPLDEIARL 240

Query: 288 AKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVS 347
             L+G EIN+AKK++A E T ++HG E A  A   A + F+  + S  +PT+ I +  + 
Sbjct: 241 EALEGAEINDAKKVLADEATRLLHGDEAAATARDTAQKAFEQGVLSADLPTVEIERAVLD 300

Query: 348 RGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFG 407
            G+ L  L  K G  +S  EARR  +   +++N+  I++    +   D ++ G IK+S G
Sbjct: 301 EGIMLAALATKIGLTSSNGEARRLAQGGGLRVNDLAITDGNQLVTAMDLNADGVIKVSQG 360

Query: 408 KKNHIICH 415
           KK  ++  
Sbjct: 361 KKKILLVK 368


>gi|15616741|ref|NP_239953.1| tyrosyl-tRNA synthetase [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
 gi|11134935|sp|P57221|SYY_BUCAI RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|25292899|pir||G84943 tyrosine-tRNA ligase (EC 6.1.1.1) [imported] - Buchnera sp.
           (strain APS)
 gi|10038804|dbj|BAB12839.1| tyrosyl-tRNA synthetase [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
          Length = 422

 Score =  414 bits (1066), Expect = e-113,   Method: Composition-based stats.
 Identities = 161/423 (38%), Positives = 229/423 (54%), Gaps = 12/423 (2%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  F  +F+S L  RG I  I+N   L  L     ++ Y G+D T  SLH GHL  L++L
Sbjct: 1   MSEF--NFISRLHNRGLISHITNEDNLSKLIENKSISLYCGFDPTEESLHIGHLLPLIML 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GH+PI L+GG TS+IGDPSF+++ R    +  +    EKI    S F+ +  GK
Sbjct: 59  KRFQIAGHRPIILIGGATSLIGDPSFKEKERVFNSNYNVNIWTEKITKQISCFLDFNCGK 118

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMIL 179
             A++LNN TW   I  +  LR++G +FSVN M++  +V+ R+ R +Q +SF EF+Y +L
Sbjct: 119 NSAVLLNNNTWFKQINILSFLRDVGKYFSVNTMINRAAVKQRITRPDQGISFTEFSYNLL 178

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK 239
           QAYDF  L + Y   LQ+GG+DQWGNI  G+ L  R     ++ LT PLL  ++G K GK
Sbjct: 179 QAYDFFILNQQYQADLQIGGADQWGNISSGMHLIHRKTKRVVYGLTVPLLIQSNGIKFGK 238

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINE 297
           T SG IWL+   TSPY F+Q+W NI+DA+V  F K  T + +SEI+++ K +    +I  
Sbjct: 239 TESGTIWLDSNKTSPYKFYQFWMNIEDANVYYFLKLFTFIKVSEINKLEKNKNIKNQIIN 298

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSI------HSQHMPTISISKDEVSRGMG 351
            K ++A  IT +VHG+E+   A       F  +         Q +    I   EVS    
Sbjct: 299 DKSLLAKHITQLVHGKEKLLAAERITKFLFLKNTTHIEESDLQQLKQDGIPFIEVSNVKD 358

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           L   +V    A S  +A+  + SN+I IN   I  +      +D        LS GKK H
Sbjct: 359 LQEALVLTSLAQSRTQAKNMIISNSISINTEKIR-KNHIFHEKDKLFGKFTLLSRGKKQH 417

Query: 412 IIC 414
            + 
Sbjct: 418 SLL 420


>gi|326519552|dbj|BAK00149.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326531108|dbj|BAK04905.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 512

 Score =  414 bits (1065), Expect = e-113,   Method: Composition-based stats.
 Identities = 138/456 (30%), Positives = 213/456 (46%), Gaps = 55/456 (12%)

Query: 16  GFIHQISNPRELDILCSQG---VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPIS 72
           G +   ++        + G    +  Y G+D TA SLH G+L  L+ L W ++ GH  ++
Sbjct: 58  GLVEATTSEALGSSSAASGEQQQLKVYCGFDPTAESLHLGNLLGLVALSWFRRCGHTAVA 117

Query: 73  LMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA--------- 123
           L+GG T  +GDPS +   R  +    +  N + IK + +  +      +           
Sbjct: 118 LVGGATGRVGDPSGKSAERPELDLAAVVANSDAIKSLIAQILSRAPEPSHHAQSGKSAIL 177

Query: 124 ----------------------------LMLNNETWLCSIKYIDLLREIGSFFSVNRMLS 155
                                       ++L+N  W   I  +D L+E+G F  V  M++
Sbjct: 178 EKHEDALAKSGQGLSEESGNVGESMGSFVILDNYDWWKDITLLDFLKEVGKFARVGTMIA 237

Query: 156 FESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER 215
            ESV+ RL  E  +S+ EF Y +LQ YDF+ + KN    +Q+GGSDQWGNI  G DL  +
Sbjct: 238 KESVKKRLNSEDGMSYTEFTYQLLQGYDFLYMFKNMGVNVQIGGSDQWGNITAGTDLIRK 297

Query: 216 LKTPK-LFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAK 274
           +   +    LT PLL  + GTK GKT  GAIWL+ +M SPY F+QY+ ++ D DVV F +
Sbjct: 298 ILQVEGAHGLTFPLLLKSDGTKFGKTEDGAIWLSSKMLSPYKFYQYFFSVPDVDVVRFMR 357

Query: 275 RLTTLPMSEI---DRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDM-- 329
            LT L + EI   +   K  G   N  ++ +A E+T  VHG+E  E+A  A         
Sbjct: 358 ILTFLSLDEIHELEESMKKPGYVPNTVQRRLAEEVTLFVHGQEGLEEALKATEALRPGAQ 417

Query: 330 --------SIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINN 381
                      +  +P+ S+  D+V +   L+ L    G   S +  RR +K   + +NN
Sbjct: 418 TQLDSQTIEGIADDVPSCSLPYDQVLKS-PLVDLAASTGLLASKSAVRRLIKQGGLYLNN 476

Query: 382 SIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
             I +E   ++  D      + LS GKKN ++  + 
Sbjct: 477 KKIDSEDKLVEEGDIVDGKVLLLSAGKKNKMVVRIS 512


>gi|51246721|ref|YP_066605.1| tyrosyl-tRNA synthetase [Desulfotalea psychrophila LSv54]
 gi|81641170|sp|Q6AJ82|SYY_DESPS RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|50877758|emb|CAG37598.1| probable tyrosyl-tRNA synthetase [Desulfotalea psychrophila LSv54]
          Length = 405

 Score =  413 bits (1062), Expect = e-113,   Method: Composition-based stats.
 Identities = 109/423 (25%), Positives = 183/423 (43%), Gaps = 32/423 (7%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQG-----VVTAYIGYDLTASSLHAGHLT 55
           MP+ +      L ERG +    +  EL     +       +    G+D TA  LH GH  
Sbjct: 3   MPSLEEQI--ELIERGCV-DCISRDELVKKLKKSAETGIPLKVKAGFDPTAPDLHLGHTV 59

Query: 56  QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK 115
            L  L   Q  GH+ I L+G  T +IGDP+ + E+R+ +  +++ EN E  K      + 
Sbjct: 60  LLQKLKQFQDLGHQVIFLIGDFTGMIGDPTGKSETRKALTVEQVAENAETYKKQVFKILD 119

Query: 116 YGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFN 175
                    +  N TWL  +   +++ ++ S  +V RML  E  ++R +  + +S  EF 
Sbjct: 120 ----PEKTTVAFNSTWLSKLTAHEMI-QLASELTVARMLEREDFKNRYESGKPISIHEFM 174

Query: 176 YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT 235
           Y ++Q YD V L    +  +++GG+DQ  N++ G DL           LT PLL    G 
Sbjct: 175 YPLIQGYDSVAL----EADVEIGGTDQRFNVLMGRDLQRSRGQAPQVVLTLPLLEGLDGV 230

Query: 236 -KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID---RMAKLQ 291
            KM K+L   I + ++     + +    ++ D  +  + + L+ L  +EI       +  
Sbjct: 231 NKMSKSLGNYIGITEDAD---SIYGKVLSVSDDLMFRYYELLSDLTTAEIADLRAQMEAG 287

Query: 292 GKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMG 351
                E KK +A E+T   H  E A  A       F      + +P   +S DE    + 
Sbjct: 288 TLHPKEVKKQLARELTARYHSEEAAIAAEQNFENVFKKGGIPEDLPEYQVSLDE---PIW 344

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           L  L+  A    ST+E RR +K  A+ ++     +E + I  +     G + +  GK+  
Sbjct: 345 LPKLLADAEMVKSTSEGRRMIKQGAVSLDGEKAVDESMLISPE-----GEVLIKVGKRRF 399

Query: 412 IIC 414
           +  
Sbjct: 400 VKV 402


>gi|293977785|ref|YP_003543215.1| tyrosyl-tRNA synthetase [Candidatus Sulcia muelleri DMIN]
 gi|292667716|gb|ADE35351.1| tyrosyl-tRNA synthetase [Candidatus Sulcia muelleri DMIN]
          Length = 423

 Score =  413 bits (1062), Expect = e-113,   Method: Composition-based stats.
 Identities = 147/429 (34%), Positives = 229/429 (53%), Gaps = 24/429 (5%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           ++ +  L  RG IH  +   ++       ++T Y G+D T  SLH G+L  +++L   QK
Sbjct: 2   NNLIQELLWRGLIHDTTYSEQIK----NEIITLYTGFDPTYKSLHIGNLVAIIMLIHFQK 57

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
           +G+  IS++GGGT +IGDPS ++  R + + + +  NI  +K   S +I +   K +  +
Sbjct: 58  SGNNIISVIGGGTGMIGDPSGKNCERILKKKELLYNNIFYLKKQLSLYIDFNYPKNE--I 115

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           LNN  WL    +I+  R+IG +F++N ML+ +S++ R+    S+SF EF Y +LQAYDF+
Sbjct: 116 LNNYEWLKKKLFIEFARDIGKYFTINYMLTKDSIKRRISNNNSISFTEFTYQLLQAYDFI 175

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG-A 244
            L K  +C LQ+GGSDQWGNI  GI+L  +    K+  LT PL+T   G+K GKT +G  
Sbjct: 176 YLYKEKNCSLQIGGSDQWGNITSGIELIRKKLGVKVNGLTFPLITKLDGSKFGKTENGEN 235

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKII 302
           IW++  +TSPY F+Q+W NI D     + K  T L   EI  +      +      +K +
Sbjct: 236 IWIDPNLTSPYEFYQFWINISDEQAKKYIKIYTFLKKEEIKEIIFYHENDPKLKLIQKKL 295

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMS------------IHSQHMPTISISKDEVSRGM 350
           A+EIT  +HG++  EK    +   F+                 +++P   I     +  +
Sbjct: 296 ASEITIFIHGKKTFEKIKFISNILFNKKKIINEINKNYIIFIYKNIPHKKIYIYH-NFNI 354

Query: 351 GLLTLIV-KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
            ++ L+V K+ F  S  EA R LK N+I IN   I +EK  +   D  S   + L  GKK
Sbjct: 355 PIIDLLVNKSKFLKSKKEAIRQLKLNSIYINKKNI-DEKFILNKNDLISGTYVLLQKGKK 413

Query: 410 NHIICHLCG 418
           N  +  + G
Sbjct: 414 NFFMIKIYG 422


>gi|115436768|ref|NP_001043131.1| Os01g0500900 [Oryza sativa Japonica Group]
 gi|15408650|dbj|BAB64064.1| putative tyrosine-tRNA ligase [Oryza sativa Japonica Group]
 gi|113532662|dbj|BAF05045.1| Os01g0500900 [Oryza sativa Japonica Group]
 gi|125526089|gb|EAY74203.1| hypothetical protein OsI_02083 [Oryza sativa Indica Group]
 gi|215694904|dbj|BAG90095.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 497

 Score =  413 bits (1062), Expect = e-113,   Method: Composition-based stats.
 Identities = 138/456 (30%), Positives = 216/456 (47%), Gaps = 41/456 (8%)

Query: 2   PAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
              +   + +L ERG +   ++        S   + AY G+D TA SLH G+L  L++L 
Sbjct: 43  TVIRRSVVEVLRERGLVEATTSESLGSASASPRELKAYCGFDPTAESLHLGNLLGLVVLS 102

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKT 121
           W ++ GH  ++L+GG T  +GDPS +   R  +    ++ N   IK +    +      +
Sbjct: 103 WFRRCGHNAVALVGGATGRVGDPSGKSAERPELDLAAVETNSNAIKSLIGQILDRAPEPS 162

Query: 122 DA--------------------------LMLNNETWLCSIKYIDLLREIGSFFSVNRMLS 155
                                        +L+N  W   I  +D L+E+G F  V  M++
Sbjct: 163 QHSQSGKNLNLEQNEQALVNSGEKMGSFQILDNYDWWKDITLLDFLKEVGRFARVGTMIA 222

Query: 156 FESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER 215
            ESV+ RL  E  +S+ EF Y +LQ YDF+ + +N    +Q+GGSDQWGNI  G +L  +
Sbjct: 223 KESVKKRLMSEDGMSYTEFTYQLLQGYDFLYMFRNMGVNVQIGGSDQWGNITAGTELIRK 282

Query: 216 LKTPK-LFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAK 274
           +   +    LT PLL  + GTK GKT  GAIWL+ +M SPY F+QY+ ++ D DV+ F K
Sbjct: 283 ILQVEGAHGLTFPLLLKSDGTKFGKTEDGAIWLSPKMLSPYKFYQYFFSVPDIDVIRFMK 342

Query: 275 RLTTLPMSEI---DRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDM-- 329
            LT + + EI   +   K  G   N  ++ +A E+T  VHG E  E+A  A         
Sbjct: 343 ILTFMSLDEIQELEESMKKPGYVPNTIQRRLAEEVTRFVHGEEGLEEALKATEALRPGAQ 402

Query: 330 --------SIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINN 381
                      +  +P+  +   +V +   L+ L V  G   S +  RR +K   + +NN
Sbjct: 403 TQLDSQTIEGIADDVPSCFLPYGQVLKS-PLVDLAVSTGLLASKSAVRRLIKQGGLYLNN 461

Query: 382 SIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
             I +E   ++  D      + LS GKKN ++  + 
Sbjct: 462 IRIDSEDKLVEEGDVVDGKVLLLSAGKKNKMVVRIS 497


>gi|195027758|ref|XP_001986749.1| GH21538 [Drosophila grimshawi]
 gi|193902749|gb|EDW01616.1| GH21538 [Drosophila grimshawi]
          Length = 464

 Score =  412 bits (1060), Expect = e-113,   Method: Composition-based stats.
 Identities = 133/446 (29%), Positives = 214/446 (47%), Gaps = 32/446 (7%)

Query: 2   PAFKSDF----LSILSERGFIHQI---SNPRELDILCSQGVVTAYIGYDLTASSLHAGHL 54
             FK  F    L  LS+RGF   I   +   ++  L      T Y G+D TA SLH G+L
Sbjct: 17  TNFKRTFTHKNLLELSDRGFFQSIFPDTAGPKMKELFRSAPQTVYAGFDPTADSLHVGNL 76

Query: 55  TQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFI 114
             +M L   Q+ GH+PI+L+GG T +IGDPS R   R  M    I+ N++ I+       
Sbjct: 77  LVIMGLLHCQRAGHQPIALVGGATGLIGDPSGRKTERNQMGVSVIESNLQAIELQLRKVF 136

Query: 115 KY-----------GTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL 163
           K             +      ++NN  W  ++  ID +  +G  F +  MLS  SV+SRL
Sbjct: 137 KNHEDCLWDARKDSSPFVPLKIVNNAEWYANLNLIDFVANMGRHFRMGSMLSRSSVQSRL 196

Query: 164 KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLG-ERLKTPKLF 222
           + E  +SF EF Y I QAYD++ L + ++C  QMGGSDQ GN++ G +L        ++F
Sbjct: 197 ESEDGMSFTEFTYQIFQAYDWLHLLRKHNCCFQMGGSDQTGNLMTGHELISRVEGNREVF 256

Query: 223 ALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMS 282
            +T P++T   G K GK+   A+WL+++ TSP+  +Q++  + D++V    K  T +P+ 
Sbjct: 257 GMTLPIVTNEEGDKFGKSAGNAVWLDEKKTSPFALYQFFLRMPDSEVEKLLKLFTFIPLP 316

Query: 283 EIDRMAKLQGKEI--NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSI--------- 331
           E++++ +   KE    +A+ ++A ++T +VHG    ++A       +  ++         
Sbjct: 317 EVEQLMREHAKEPEKRKAQTLLAEDVTLLVHGEHGLKQAERVTNALYKGNVDGLAELNYT 376

Query: 332 -HSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQ 390
              Q     ++       GM +L L +KA    +  +A R + +    IN   + N    
Sbjct: 377 EIKQTFQGATVVDILTEPGMSILQLAMKAKCFPTETDAVRIINAGGFYINQKRVQNIAEV 436

Query: 391 IKLQ-DFDSTGNIKLSFGKKNHIICH 415
           I         G   L  GK+N  I  
Sbjct: 437 ITTGIHILRNGVSLLRVGKRNFYIVR 462


>gi|261749629|ref|YP_003257315.1| putative tyrosyl-tRNA synthetase 1 [Blattabacterium sp.
           (Periplaneta americana) str. BPLAN]
 gi|261497722|gb|ACX84172.1| putative tyrosyl-tRNA synthetase 1 [Blattabacterium sp.
           (Periplaneta americana) str. BPLAN]
          Length = 427

 Score =  411 bits (1058), Expect = e-113,   Method: Composition-based stats.
 Identities = 142/431 (32%), Positives = 224/431 (51%), Gaps = 26/431 (6%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
            + +  LS RG I       E  +   +   T YIG+D T+ SLH G L  +++L   QK
Sbjct: 2   KNIIDELSWRGLIQNKVPGVEKQL---KKRTTIYIGFDPTSDSLHLGSLLPIIILIHFQK 58

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHK I L+GG T +IGDPS + + R     + +Q+N E IK      + + + KT+  +
Sbjct: 59  LGHKSIVLIGGATGLIGDPSEKKDQRIFFSLETLQKNAESIKKQLYKLLNFYSEKTE--L 116

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ--SLSFLEFNYMILQAYD 183
           LNN +W+  I  +D LR +G  F +N M+S +SV+ R+   +   +SF EF+Y ++Q YD
Sbjct: 117 LNNFSWIKKISLLDFLRNVGKHFPINYMMSKDSVKKRIDNNKNNGMSFTEFSYSLIQGYD 176

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F+ L K  +C LQ+GGSDQWGNI  GI+L  +    K + +T PL+T + G K GK+  G
Sbjct: 177 FLYLNKEKNCLLQIGGSDQWGNITTGIELIRKKTGKKAYGITFPLVTKSDGIKFGKSEKG 236

Query: 244 -AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKK 300
             IWL+++ T+PY F+Q+W N+ D ++  F K  T     +I+ +     K       +K
Sbjct: 237 ENIWLDRKRTTPYKFYQFWMNVSDKEIEKFIKIYTFFSKEKIESLILKHRKNPEKRFLQK 296

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHS---------------QHMPTISISKDE 345
            +A EIT  VHG+   E+    +   F     +               +++P + +   E
Sbjct: 297 RVAEEITQWVHGKMAYEEVVKISHVLFGKKYINELLLSLDEKILFSIYENIPHMKLPYKE 356

Query: 346 VSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLS 405
             +G+ LL ++ K+    S +EA R L  N+I IN  +I  + + +  ++      I   
Sbjct: 357 FEKGVFLLDVLKKSSLFASKSEANRALNLNSISINKKLIK-KNILLHKENLIGKKYILFQ 415

Query: 406 FGKKNHIICHL 416
           FGKKN  I  +
Sbjct: 416 FGKKNFFITKV 426


>gi|293390253|ref|ZP_06634587.1| tyrosyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D7S-1]
 gi|290950787|gb|EFE00906.1| tyrosyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D7S-1]
          Length = 395

 Score =  411 bits (1058), Expect = e-113,   Method: Composition-based stats.
 Identities = 104/419 (24%), Positives = 179/419 (42%), Gaps = 28/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M    +  L+ L  RG    +S    ++ L     +   +G D TA  +H GH   L  L
Sbjct: 1   MTDMNT-VLAELK-RGVDEILSEQDLIEKLKENRPLRVKLGADPTAPDIHLGHTVVLNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GH+ I L+G  T ++GDPS ++ +R  +  +++  N E  K      +     +
Sbjct: 59  RQFQNFGHEVIFLIGDFTGMVGDPSGKNTTRPPLSREDVLRNAETYKQQIYKILDPQKTR 118

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               ++ N  WL  +    ++R + S ++V RML  +  + R    Q ++  EF Y +LQ
Sbjct: 119 ----IVFNSDWLGKLGTEGMIR-LASNYTVARMLERDDFKKRFSNNQPIAIHEFIYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGK 239
             D V L    +  +++GG+DQ  N++ G +L +        A+T PLL    G  KM K
Sbjct: 174 GQDSVAL----EADVELGGTDQKFNLLVGRELQKSAGQKPQVAITLPLLVGLDGEKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINE 297
           +L   I +     +P   +    +I D  +  +   L+  P++EI ++ +    GK   +
Sbjct: 230 SLGNYIGVT---DAPSEMFGKIMSISDDLMWDWYNLLSFRPLTEIIQLKEDVANGKNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A EI    H   +A+ A    +  F        MP  +         +GL  L+ 
Sbjct: 287 VKILLAKEIIARFHSEADADTAEQEFINRFQKGAMPDDMPEFT-----FEGEIGLANLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            AG   ST+EA R ++   +KI+   + + KL I               GK+      +
Sbjct: 342 DAGLVASTSEANRMVQQGGVKIDGEKVDDAKLIITTS------TAVYQVGKRKFAKVTV 394


>gi|293603319|ref|ZP_06685747.1| tyrosine--tRNA ligase [Achromobacter piechaudii ATCC 43553]
 gi|292818229|gb|EFF77282.1| tyrosine--tRNA ligase [Achromobacter piechaudii ATCC 43553]
          Length = 409

 Score =  411 bits (1057), Expect = e-112,   Method: Composition-based stats.
 Identities = 100/385 (25%), Positives = 178/385 (46%), Gaps = 25/385 (6%)

Query: 35  VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMM 94
            +   +G D TA  +H GH   L  +  LQ  GH  I L+G  TS IGDPS R+ +R  +
Sbjct: 45  PLRIKLGLDPTAPDIHLGHTVVLNKMRQLQDLGHNVIFLIGDFTSTIGDPSGRNSTRPPL 104

Query: 95  RSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRML 154
             ++I+ N +      S  +     +    +  N  W   +    ++ ++ S ++V RM+
Sbjct: 105 TREQIESNAKTYYAQASLVLDPARTE----IRYNSEWCDPLGARGMI-QLASRYTVARMM 159

Query: 155 SFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
             E    R K    +S  EF Y ++Q YD V L  +    L++GG+DQ  N++ G +L +
Sbjct: 160 EREDFTKRFKGGIPISVHEFLYPLMQGYDSVALKSD----LELGGTDQKFNLLVGRELQK 215

Query: 215 RLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFA 273
                    LT PLL    G  KM K+    I +++   SP + +    +I D  +  + 
Sbjct: 216 EYGQEPQCILTMPLLVGTDGVEKMSKSKGNYIGISE---SPDSMFGKLMSISDTLMWRYF 272

Query: 274 KRLTTLPMSEIDRMAKLQ--GKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSI 331
           + L+   + +I  + +    G+   +AK ++A EI T  H  + AE+A  +    F    
Sbjct: 273 ELLSFRSLEDIAALKQETDGGRNPRDAKVMLAQEIITRFHSAKAAEEALASFEARFRDGA 332

Query: 332 HSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
             + MP ++I        +G+L L+ +AG   S +EA+R+++   +++N   + ++ LQ+
Sbjct: 333 IPEDMPEVNIG----GAPVGILKLLREAGLVASGSEAQRNVEQGGVRVNGDRVEDKSLQL 388

Query: 392 KLQDFDSTGNIKLSFGKKNHIICHL 416
                   G   +  GK+     +L
Sbjct: 389 AA------GTYVVQVGKRKFARVNL 407


>gi|261867885|ref|YP_003255807.1| tyrosyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D11S-1]
 gi|261413217|gb|ACX82588.1| tyrosyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D11S-1]
          Length = 395

 Score =  411 bits (1057), Expect = e-112,   Method: Composition-based stats.
 Identities = 104/419 (24%), Positives = 179/419 (42%), Gaps = 28/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M    +  L+ L  RG    +S    ++ L     +   +G D TA  +H GH   L  L
Sbjct: 1   MTDMNT-VLAELK-RGVDEILSEQDLIEKLKENRPLRVKLGADPTAPDIHLGHTVVLNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GH+ I L+G  T ++GDPS ++ +R  +  +++  N E  K      +     +
Sbjct: 59  RQFQNFGHEVIFLIGDFTGMVGDPSGKNTTRPPLSREDVLRNAETYKQQIFKILDPQKTR 118

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               ++ N  WL  +    ++R + S ++V RML  +  + R    Q ++  EF Y +LQ
Sbjct: 119 ----IVFNSDWLGKLGTEGMIR-LASNYTVARMLERDDFKKRFSNNQPIAIHEFIYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGK 239
             D V L    +  +++GG+DQ  N++ G +L +        A+T PLL    G  KM K
Sbjct: 174 GQDSVAL----EADVELGGTDQKFNLLVGRELQKSAGQKPQVAITLPLLVGLDGEKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINE 297
           +L   I +     +P   +    +I D  +  +   L+  P++EI ++ +    GK   +
Sbjct: 230 SLGNYIGVT---DAPSEMFGKIMSISDDLMWDWYNLLSFRPLTEIIQLKEDVANGKNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A EI    H   +A+ A    +  F        MP  +         +GL  L+ 
Sbjct: 287 VKILLAKEIIARFHSEADADTAEQEFINRFQKGAMPDDMPEFT-----FEGEIGLANLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            AG   ST+EA R ++   +KI+   + + KL I               GK+      +
Sbjct: 342 DAGLVASTSEANRMVQQGGVKIDGEKVDDAKLIITTS------TAVYQVGKRKFAKVTV 394


>gi|125809705|ref|XP_001361216.1| GA14214 [Drosophila pseudoobscura pseudoobscura]
 gi|54636391|gb|EAL25794.1| GA14214 [Drosophila pseudoobscura pseudoobscura]
          Length = 464

 Score =  411 bits (1056), Expect = e-112,   Method: Composition-based stats.
 Identities = 129/438 (29%), Positives = 216/438 (49%), Gaps = 29/438 (6%)

Query: 6   SDFLSILSERGFIHQI---SNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
            + L  L++RGF   I   +   ++  L + G  + Y G+D TA SLH G+L  +M L  
Sbjct: 26  KNLLE-LTDRGFFQGIFPDTAAPKIKQLFTSGQQSIYAGFDPTADSLHVGNLLVIMGLLH 84

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFI-------- 114
            Q+ GH+PI+L+GG T +IGDPS R   R  +    I+ N++ I+   +           
Sbjct: 85  CQRAGHRPIALVGGATGLIGDPSGRKTERNQLGESIIESNLKAIEQQLTRVFENHEKCLW 144

Query: 115 ---KYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSF 171
              K  T      ++NN  W  ++  ID +  +G  F +  MLS  SV+SRL+ E  +SF
Sbjct: 145 DNRKNSTPLQPLTIVNNAEWYANLHLIDFIANMGRHFRMGSMLSRSSVQSRLESEDGMSF 204

Query: 172 LEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLLT 230
            EF Y I QAYD++ L + ++C  QMGGSDQ GN++ G +L  R++   ++F +T P++T
Sbjct: 205 TEFTYQIFQAYDWLHLLRKHNCCFQMGGSDQTGNLMTGHELISRVERKREVFGMTLPIVT 264

Query: 231 TASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL 290
              G K GK+   A+WL++  TSP+  +Q++  + D++     K  T +P++EI+++ + 
Sbjct: 265 NEEGDKFGKSAGNAVWLDENKTSPFALYQFFLRMPDSEAEKLLKLFTFIPLTEIEQLMQE 324

Query: 291 QGKEI--NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSI----------HSQHMPT 338
             KE    +A+ ++A ++T +VHG    ++A       +   +            Q    
Sbjct: 325 HEKEPEKRKAQTLLAEDVTLLVHGENGLKQAERVTNALYKGKVDGLAELNYAEIKQTFQG 384

Query: 339 ISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ-DFD 397
            ++       GM +L L +KA    +  +A R + +    +N   + N    I       
Sbjct: 385 AAVVDLLTEPGMSILQLAMKAKCFPTETDAVRIINAGGFYVNQKRVQNIAEVITAGIHIL 444

Query: 398 STGNIKLSFGKKNHIICH 415
             G   L  GK+N  I  
Sbjct: 445 RNGVSLLRVGKRNFYIVR 462


>gi|195489803|ref|XP_002092892.1| GE11414 [Drosophila yakuba]
 gi|194178993|gb|EDW92604.1| GE11414 [Drosophila yakuba]
          Length = 464

 Score =  411 bits (1056), Expect = e-112,   Method: Composition-based stats.
 Identities = 131/439 (29%), Positives = 218/439 (49%), Gaps = 29/439 (6%)

Query: 5   KSDFLSILSERGFIHQISNPRE---LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
           + + L  L++RGF   I        +  L + G  + Y G+D TA SLH G+L  +M L 
Sbjct: 25  QKNLLE-LTDRGFFQGIFPDTAAPRMKQLFTSGQQSIYAGFDPTADSLHVGNLLVIMGLI 83

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFI------- 114
             Q+ GHKPI+L+GG T +IGDPS R   R  +    I+ N++ I+              
Sbjct: 84  HCQRAGHKPIALVGGATGLIGDPSGRKTERNQLGETVIETNLKAIEQQLRQVFENHENCL 143

Query: 115 ----KYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLS 170
               K+ +      ++NN  W   ++ ID +  +G  F +  MLS  SV+SRL+ E  +S
Sbjct: 144 WDSKKHKSPLPPLTIVNNADWYADLQLIDFVANMGRHFRMGSMLSRSSVQSRLESEDGMS 203

Query: 171 FLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLL 229
           F EF Y I QAYD++ L + ++C  QMGGSDQ GN++ G +L  R++   ++F LT PL+
Sbjct: 204 FTEFTYQIFQAYDWLHLLRRHNCCFQMGGSDQTGNLMTGHELISRVERKREVFGLTLPLV 263

Query: 230 TTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK 289
           TT  G K GK+   A+WL+   TSP+  +Q++  + D++V    K  T +P+ +++++ +
Sbjct: 264 TTEEGDKFGKSAGNAVWLDGNKTSPFALYQFFLRMPDSEVEKLLKLFTFIPLPQVEQLMR 323

Query: 290 LQGKEI--NEAKKIIATEITTMVHGREEAEKAATAAMECFDM---SIHSQHMPTI----- 339
              KE    +A+ ++A ++T +VHG    ++A       +      +   ++P I     
Sbjct: 324 EHTKEPEKRKAQTLLAEDVTLLVHGESGLKQAERVTNALYKGKVEGLAELNLPEIQQTFQ 383

Query: 340 --SISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ-DF 396
             ++       GM +L L +KA    +  +A R + +    +N   + N    +      
Sbjct: 384 GATMVNLLTEPGMSILELAMKAKCFPTETDAVRIINAGGFYVNQKRVQNIAEVLTTGVHI 443

Query: 397 DSTGNIKLSFGKKNHIICH 415
              G   L  GK+N  I  
Sbjct: 444 LRNGISLLRVGKRNFYIVR 462


>gi|82701636|ref|YP_411202.1| tyrosyl-tRNA synthetase [Nitrosospira multiformis ATCC 25196]
 gi|115305810|sp|Q2YBR1|SYY_NITMU RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|82409701|gb|ABB73810.1| tyrosyl-tRNA synthetase [Nitrosospira multiformis ATCC 25196]
          Length = 403

 Score =  411 bits (1056), Expect = e-112,   Method: Composition-based stats.
 Identities = 98/420 (23%), Positives = 180/420 (42%), Gaps = 23/420 (5%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M    S+ + I+  RG    +        L     +    G+D TA  LH GH   L  +
Sbjct: 1   MTIPISEQIEIIK-RGCSELLLEDELEQKLAQNRPLRIKAGFDPTAPDLHLGHTVLLNKM 59

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             LQ  GH  + L+G  T +IGDPS ++ +R  +  +++ EN +  +      +K     
Sbjct: 60  RHLQDLGHHALFLIGDFTGMIGDPSGKNTTRPPLSREQVAENAKSYQDQVFRILK----P 115

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               ++ N  W+  +   DL++   +  +V RML  +    R +  + ++  EF Y ++Q
Sbjct: 116 EQTEVVFNSAWMDRLNAADLIKLAATH-TVARMLERDDFGKRYQSNKPIAIHEFLYPLIQ 174

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGK 239
            YD V L  +    +++GG+DQ  N++ G +L +         +T PLL    G  KM K
Sbjct: 175 GYDSVALRAD----IELGGTDQKFNLLMGRELQKHFGQASQCVITMPLLEGLDGVNKMSK 230

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINE 297
           +    I + +   SP N +    +I D  +  + + L+  P+  + +  +    G+   +
Sbjct: 231 SAGNYIGITE---SPGNMFGKLMSISDELMWRYIELLSFEPLRVVRQWQQDVGNGRNPRD 287

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K + A EI T  H R++AE A       F        +P   +       G+ +  L+ 
Sbjct: 288 IKVLFAQEIVTRFHSRQDAEAALADFESRFRRGGIPDDLPENILQAG--KEGLPIAQLLK 345

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           + G   ST EA R ++   +K+N   +S++  ++          + +  GK+      +C
Sbjct: 346 QTGLTASTTEALRMIEQGGVKLNGEKVSDKTFRLSC-----GQMVIVQVGKRKFARVTIC 400


>gi|297616908|ref|YP_003702067.1| tyrosyl-tRNA synthetase [Syntrophothermus lipocalidus DSM 12680]
 gi|297144745|gb|ADI01502.1| tyrosyl-tRNA synthetase [Syntrophothermus lipocalidus DSM 12680]
          Length = 405

 Score =  410 bits (1055), Expect = e-112,   Method: Composition-based stats.
 Identities = 111/413 (26%), Positives = 188/413 (45%), Gaps = 29/413 (7%)

Query: 12  LSERGFIHQISNPRELDIL----CSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           L +RG    +     L  L     +Q  + A +G D TA  +H GH   L  L   Q  G
Sbjct: 14  LLKRGTAEILPEDEFLKKLENSIRNQKPLRAKLGLDPTAPDIHLGHSVVLNKLRQFQDLG 73

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+   ++G  T  IGDPS + E+R+ +  +E+ +N    +      +     K+   +  
Sbjct: 74  HEVHLIIGDFTGRIGDPSGKSETRKQLSEEEVIQNARTYEMQIFKILD----KSKTYIYF 129

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  +++ D++   G + +V RM+  E    R K    +S  EF Y ++Q YD V L
Sbjct: 130 NSEWLSRMRFADVINLAGKY-TVARMMEREDFSRRFKEGIPISVHEFLYPLMQGYDSVVL 188

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIW 246
             +    +++GG+DQ  N++ G DL +        AL  P+L    G  KM K+L   I 
Sbjct: 189 RAD----VELGGTDQKFNLLVGRDLQKEYGQEPQIALMMPILEGTDGVQKMSKSLGNYIG 244

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKIIA 303
           +N++       +    +I D+ +  + + +T +PM EI  +    K       +AK  +A
Sbjct: 245 INEDAN---EMYGKTMSIPDSLITRYFELVTRVPMEEITEIETAIKSGRMNPRDAKMRLA 301

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
            EI  M HG+EEA +A       F        +   +IS    +  + +  L+V+AG   
Sbjct: 302 REIVRMYHGQEEAYRAEERFKLVFQQREIPDDIEEFTIS----TNPIWVGKLLVEAGLCP 357

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           ST+EA+R +K  A+K++   I +E   + L+D        +  GK+  +   +
Sbjct: 358 STSEAKRMVKQGAVKVDGKRIEDEDANLALEDGQ-----VIQVGKRRFVRIRV 405


>gi|254508205|ref|ZP_05120329.1| tyrosyl-tRNA synthetase [Vibrio parahaemolyticus 16]
 gi|219548822|gb|EED25823.1| tyrosyl-tRNA synthetase [Vibrio parahaemolyticus 16]
          Length = 395

 Score =  410 bits (1055), Expect = e-112,   Method: Composition-based stats.
 Identities = 100/419 (23%), Positives = 177/419 (42%), Gaps = 28/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M + ++    I  +RG    I     +  L     +   +G D TA  +H GH   L  L
Sbjct: 1   MASIEAALAEI--KRGVDELIPEEELIAKLKEGRPLRIKLGADPTAPDIHLGHTVILNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH    L+G  T ++GDP+ ++ +R  +  +++  N E  K      +     K
Sbjct: 59  RAFQELGHDVTFLIGDFTGMVGDPTGKNTTRPPLTREDVLRNAETYKEQVFKILDPAKTK 118

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N  WL  +    ++R + +  +V RML  +  + R    Q ++  EF Y +LQ
Sbjct: 119 ----IQFNSEWLSELGAEGMIR-LAANQTVARMLERDDFKKRYSGGQPIAIHEFMYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGK 239
            YD V +    +  +++GG+DQ  N++ G +L +         LT PLL    G  KM K
Sbjct: 174 GYDSVAM----ETDVELGGTDQKFNLLMGRELQKAHGQKPQVVLTMPLLVGLDGEKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINE 297
           +    I +++   +P   +    +I D  + ++ + L+  P+ EI  +      GK   +
Sbjct: 230 SAHNYIGISE---APSEMFGKIMSISDDLMWNYYELLSFRPLEEIAELKAGVESGKNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K  +A EI    H   +A+ A    +  F  +     MP  +        G+ +  L+ 
Sbjct: 287 VKVALAKEIIARFHSEADADAAEQEFVNRFAKNQIPDEMPEFA-----FDAGLPVSNLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +AG   ST+EA R +K  A KI+   +++ K   +       G      GK+      +
Sbjct: 342 EAGLCASTSEAMRMVKQGAAKIDGEKVADSKFAPEA------GTYVFQVGKRKFARITI 394


>gi|311103888|ref|YP_003976741.1| tyrosyl-tRNA synthetase [Achromobacter xylosoxidans A8]
 gi|310758577|gb|ADP14026.1| tyrosyl-tRNA synthetase [Achromobacter xylosoxidans A8]
          Length = 409

 Score =  410 bits (1055), Expect = e-112,   Method: Composition-based stats.
 Identities = 99/385 (25%), Positives = 178/385 (46%), Gaps = 25/385 (6%)

Query: 35  VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMM 94
            +   +G D TA  +H GH   L  +  LQ  GH  I L+G  TS IGDPS R+ +R  +
Sbjct: 45  PLRIKLGLDPTAPDIHLGHTVVLNKMRQLQDMGHNVIFLIGDFTSTIGDPSGRNNTRPPL 104

Query: 95  RSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRML 154
             ++I+ N +      S  +     +    +  N  W   +    ++ ++ S ++V RM+
Sbjct: 105 TREQIESNAKTYYAQASLVLDPARTE----IRYNSEWCDPLGARGMI-QLASRYTVARMM 159

Query: 155 SFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
             E    R K    +S  EF Y ++Q YD V L  +    L++GG+DQ  N++ G +L +
Sbjct: 160 EREDFTKRFKGGIPISVHEFLYPLMQGYDSVALKSD----LELGGTDQKFNLLVGRELQK 215

Query: 215 RLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFA 273
                    LT PLL    G  KM K+    I +++   SP + +    +I D  +  + 
Sbjct: 216 EYGQEPQCILTMPLLVGTDGVEKMSKSKGNYIGISE---SPDSMFGKLMSISDTLMWRYF 272

Query: 274 KRLTTLPMSEIDRMAKL--QGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSI 331
           + L+   + +I  + +    G+   +AK ++A EI T  H  + A++A  +    F    
Sbjct: 273 ELLSFRTLEDIAALKQEIDGGRNPRDAKVMLAQEIITRFHSAKAADEALASFEARFRDGA 332

Query: 332 HSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
             + MP ++I        +G+L L+ +AG   S +EA+R+++   +++N   + ++ LQ+
Sbjct: 333 IPEDMPEVNIG----GAPVGILKLLREAGLVASGSEAQRNVEQGGVRVNGDRVEDKSLQL 388

Query: 392 KLQDFDSTGNIKLSFGKKNHIICHL 416
                   G   +  GK+     +L
Sbjct: 389 PA------GTYVVQVGKRKFARVNL 407


>gi|292491224|ref|YP_003526663.1| tyrosyl-tRNA synthetase [Nitrosococcus halophilus Nc4]
 gi|291579819|gb|ADE14276.1| tyrosyl-tRNA synthetase [Nitrosococcus halophilus Nc4]
          Length = 405

 Score =  410 bits (1054), Expect = e-112,   Method: Composition-based stats.
 Identities = 116/420 (27%), Positives = 191/420 (45%), Gaps = 26/420 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGV-VTAYIGYDLTASSLHAGHLTQLML 59
           M + +  F  IL  RG   +I    EL +   QG  +    G+D TA  LH GH   L  
Sbjct: 1   MASPQQVFDEIL--RGT-EEILLAEELKLRLEQGKTLRVKAGFDPTAPELHLGHTVLLNK 57

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG 119
           L   QK GH+ + L+G  T +IGDP+ ++ +R+ +   E+ EN    +      +     
Sbjct: 58  LRQFQKLGHEALFLIGDFTGMIGDPTGKNITRQPLTRDEVLENARTYEEQIFKILD---- 113

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
               L++ N +W+  +   DL+R + S ++V RML  +    R +  Q ++  EF Y +L
Sbjct: 114 PEKTLVVFNSSWMNGMTAADLVR-LSSHYTVARMLERDDFYKRYQSGQPIAIHEFLYPLL 172

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMG 238
           Q YD V L  +    +++GG+DQ  N++ G DL +         +T P+L    G  KM 
Sbjct: 173 QGYDSVALKAD----VELGGTDQKFNLLVGRDLQKVYGQRPQVIITMPILEGLDGVQKMS 228

Query: 239 KTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEIN 296
           K+L   I +N+    P   +    +I D  +  + + L+  PM+EI    K   QG    
Sbjct: 229 KSLGNYIGINEP---PREMFGKLMSISDELMWRYLELLSFRPMTEIAHWKKEVEQGANPR 285

Query: 297 EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLI 356
           + K  +A EI    H    AE+A    +  F   +  + +  I IS      G+ +  L+
Sbjct: 286 DIKIKLAKEIVARFHSDGMAEQAHEVFVAQFRQGVLPEDISEIPISTG--KEGIPIARLL 343

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            ++   TST+EA R +K  A++I+   I N+ LQ+            +  GK+      +
Sbjct: 344 KESALTTSTSEALRMIKQGAVRIDGERIENQSLQL-----LPGITCVVQVGKRRFARVSI 398


>gi|219682052|ref|YP_002468436.1| tyrosyl-tRNA synthetase [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
 gi|254783577|sp|B8D726|SYY_BUCAT RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|219621785|gb|ACL29941.1| tyrosyl-tRNA synthetase [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
 gi|311085865|gb|ADP65947.1| tyrosyl-tRNA synthetase [Buchnera aphidicola str. LL01
           (Acyrthosiphon pisum)]
 gi|311086435|gb|ADP66516.1| tyrosyl-tRNA synthetase [Buchnera aphidicola str. TLW03
           (Acyrthosiphon pisum)]
 gi|311087018|gb|ADP67098.1| tyrosyl-tRNA synthetase [Buchnera aphidicola str. JF99
           (Acyrthosiphon pisum)]
          Length = 422

 Score =  410 bits (1054), Expect = e-112,   Method: Composition-based stats.
 Identities = 158/423 (37%), Positives = 226/423 (53%), Gaps = 12/423 (2%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  F  +F+S L  RG I  I+N   L  L     ++ Y G+D T  SLH GHL  L++L
Sbjct: 1   MSEF--NFISRLHNRGLISHITNEDNLSKLIENKSISLYCGFDPTEESLHIGHLLPLIML 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GH+PI L+GG TS+IGDPSF+++ R    +  +    EKI    S F+ +  GK
Sbjct: 59  KRFQIAGHRPIILIGGATSLIGDPSFKEKERVFNSNYNVNIWTEKITKQISCFLDFNCGK 118

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMIL 179
             A++LNN TW   I  +  LR++G +FSVN M++  +V+ R+ R +Q +SF EF+Y +L
Sbjct: 119 NSAVLLNNNTWFKQINILSFLRDVGKYFSVNTMINRAAVKQRITRPDQGISFTEFSYNLL 178

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK 239
           QAYDF  L + Y   LQ+GG+DQWGNI  G+ L  R     ++ LT PLL  ++G K GK
Sbjct: 179 QAYDFFILNQQYQVDLQIGGADQWGNISSGMHLIHRKTKRVVYGLTVPLLIQSNGIKFGK 238

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAK 299
           T SG +WL+   TSPY F+Q+W NI+DA+V  F K  T + +SEI+++ K +        
Sbjct: 239 TESGTVWLDSNKTSPYKFYQFWMNIEDANVYYFLKLFTFIKVSEINKLEKNKNINNQIIN 298

Query: 300 K--IIATEITTMVHGREEAEKAATAAMECFDMSI------HSQHMPTISISKDEVSRGMG 351
              ++A  IT +VHG+E+   A       F  +         Q +    I   EVS    
Sbjct: 299 DKSLLAKHITQLVHGKEKLLAAERITKFLFLKNTTHIEESDLQQLKQDGIPFIEVSNVKD 358

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           L   +V    A S  +A+  + SN+I IN   I  +      +D        LS GKK H
Sbjct: 359 LQEALVLTSLAQSRTQAKNMIISNSISINTEKIR-KNHIFHEKDKLFGKFTLLSRGKKQH 417

Query: 412 IIC 414
            + 
Sbjct: 418 SLL 420


>gi|312194516|ref|YP_004014577.1| tyrosyl-tRNA synthetase [Frankia sp. EuI1c]
 gi|311225852|gb|ADP78707.1| tyrosyl-tRNA synthetase [Frankia sp. EuI1c]
          Length = 429

 Score =  410 bits (1054), Expect = e-112,   Method: Composition-based stats.
 Identities = 131/427 (30%), Positives = 216/427 (50%), Gaps = 15/427 (3%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S  L  LS RG IH  ++  EL          AYIG+D TA  L  GH+  + LL    +
Sbjct: 3   SALLDELSWRGLIHDSTDAAELRNHLDSAARRAYIGFDPTAPGLTIGHMLPITLLIRAAR 62

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSS-FIKYGTGKTDAL 124
            G +P++L GGGT +IGDPS +   R+++  Q++  N+ + + +  + F +        +
Sbjct: 63  AGIRPVALFGGGTGLIGDPSGKSVERQLLSPQDVAANVSRHQELMRTIFARALPADQMPI 122

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYD 183
            ++N  WL  +  I+ LR++G  F +  M   +SVR RL+     LS+ EF+YM+LQAYD
Sbjct: 123 FVDNSAWLGGLGLIEFLRDVGKHFPIGEMTKRDSVRRRLEDPDVGLSYTEFSYMLLQAYD 182

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F  L +++   +QMG SDQWGNI+ GID   R+   +   LT PLL  + GTK GK+  G
Sbjct: 183 FRRLCEDHGVTVQMGASDQWGNIVAGIDYIRRVLRTQAHGLTCPLLLRSDGTKFGKSEKG 242

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKI 301
           A+W++ + TSPY F+Q+  N  D +   FA   +      ++++     +       ++ 
Sbjct: 243 AVWISADGTSPYTFYQFVINQSDENARQFALFFSLADRESLEKLFAQHAETPSRRALQRY 302

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVS-RGM 350
           +A E+TT+VHG E  + A  A+   F   + +            +P+I   +  +   G 
Sbjct: 303 LAREMTTLVHGEEATDAAEAASEALFKGDVRAISPQLFGDVFTDVPSIEEPRSRLDGDGW 362

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            ++ L++  G A+S   AR HL + AI IN   +S+   ++   D      + +  G++ 
Sbjct: 363 PVVDLLIAVGLASSKKVAREHLGNGAISINGDKVSDLDARVTAADLLHGSVLLVRRGRRE 422

Query: 411 HIICHLC 417
             +    
Sbjct: 423 WRLARFA 429


>gi|332288591|ref|YP_004419443.1| tyrosyl-tRNA synthetase [Gallibacterium anatis UMN179]
 gi|330431487|gb|AEC16546.1| tyrosyl-tRNA synthetase [Gallibacterium anatis UMN179]
          Length = 395

 Score =  409 bits (1053), Expect = e-112,   Method: Composition-based stats.
 Identities = 101/412 (24%), Positives = 181/412 (43%), Gaps = 27/412 (6%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L+ L  RG    +S    ++ L     +   +G D TA  +H GH   L  L   Q+ G
Sbjct: 7   VLAELK-RGVDEVLSEEDLIEKLKENRPLKIKLGADPTAPDIHLGHTVVLNKLRQFQQLG 65

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+   L+G  T ++GDPS ++ +R  +  +++  N E  K      +          ++ 
Sbjct: 66  HEVYFLIGDFTGMVGDPSGKNTTRPPLTREDVLRNAETYKQQIYKILD----PEKTHVVF 121

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N +WL  +    ++R + S ++V RML  +  + R    QS++  EF Y +LQ YD V L
Sbjct: 122 NSSWLGELGTEGMIR-LASQYTVARMLERDDFKKRFSNHQSIAIHEFIYPLLQGYDSVAL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIW 246
               +  +++GG+DQ  N++ G +L +        A+T PLL    G  KM K+L   I 
Sbjct: 181 ----EADVELGGTDQKFNLLVGRELQKARGLKPQVAITLPLLEGLDGEKKMSKSLGNYIG 236

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIAT 304
           +++   +P + +    +I D  +  +   L+   + EI ++ +    G+   + K ++A 
Sbjct: 237 VSE---APDDMFGKVMSISDELMWRWYDLLSFRSLDEIAQLKQDVANGRNPRDVKILLAK 293

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E+    H +  A+ A    +E F        MP  +         M +  L+ +A   +S
Sbjct: 294 ELIERFHDKAAADAAEQTFIERFQKGAMPDEMPEFT-----FEGEMPIANLLKEADLVSS 348

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           T+EA R +K   +KI+   + + KL I               GK+      +
Sbjct: 349 TSEALRMIKQGGVKIDGEKVEDSKLVISAS------TAVYQVGKRKFAKVTI 394


>gi|83590545|ref|YP_430554.1| tyrosyl-tRNA synthetase [Moorella thermoacetica ATCC 39073]
 gi|115305809|sp|Q2RHS8|SYY_MOOTA RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|83573459|gb|ABC20011.1| tyrosyl-tRNA synthetase [Moorella thermoacetica ATCC 39073]
          Length = 413

 Score =  409 bits (1052), Expect = e-112,   Method: Composition-based stats.
 Identities = 110/416 (26%), Positives = 190/416 (45%), Gaps = 32/416 (7%)

Query: 9   LSILSERGFIHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           L IL  RG + +I    +L     +       +   +G D TA  +H GH   L  L   
Sbjct: 19  LRILR-RG-VAEIVPEEDLQAKLRKSLATGKPLKVKLGLDPTAPDIHLGHTVVLQKLRQF 76

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q+ GH+ I ++G  T  IGDP+ + E+RR +   EI  N E  K      +         
Sbjct: 77  QELGHQVIIIIGDFTGRIGDPTGKSETRRQLTEAEILANAETYKEQIFKVLD----PEQT 132

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            +  N  WL  + + +++ E+ +  +V RML  +    R +  + +S  EF Y ++Q YD
Sbjct: 133 RVTFNSHWLGKLTFAEVI-ELAARTTVARMLERDDFARRFQENRPISIHEFFYPLMQGYD 191

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLS 242
            V LA +    +++GG+DQ  N++ G  L          A+  P+L    G  KM K+L 
Sbjct: 192 SVALAAD----VELGGTDQKFNLLMGRHLQREYGQEPQVAMMMPILPGLDGVQKMSKSLG 247

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAK 299
             I +     SP   +    ++ D  ++++ + +T +P+ E+  + +          +AK
Sbjct: 248 NYIGI---KESPREMYGKTMSLPDELMLTYYELVTAVPLEELAAIRQGLASGSLHPRDAK 304

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKA 359
             +A EI  M H  E A +A     + F        MP ++I +D V     L  L+V+A
Sbjct: 305 MRLAREIVAMYHTPEAALEAEREFRQVFQQHDLPDDMPELTIKEDRV----WLPRLMVQA 360

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           G A ST+EARR ++  A+KI+   +++   ++++++        L  GK+     H
Sbjct: 361 GLAPSTSEARRLIRQGAVKIDGERVTDPDTEVEVREGQ-----VLQAGKRKFARLH 411


>gi|323495918|ref|ZP_08100986.1| tyrosyl-tRNA synthetase [Vibrio sinaloensis DSM 21326]
 gi|323319134|gb|EGA72077.1| tyrosyl-tRNA synthetase [Vibrio sinaloensis DSM 21326]
          Length = 395

 Score =  409 bits (1051), Expect = e-112,   Method: Composition-based stats.
 Identities = 100/419 (23%), Positives = 178/419 (42%), Gaps = 28/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M + ++    I  +RG    I     +  L     +   +G D TA  +H GH   L  L
Sbjct: 1   MASIEAALAEI--KRGVDELIPEEELIAKLKEGRPLRIKLGADPTAPDIHLGHTVILNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH    L+G  T ++GDP+ ++ +R  +  +++  N E  K      +     K
Sbjct: 59  RAFQELGHDVTFLIGDFTGMVGDPTGKNTTRPPLTREDVLRNAETYKEQVFKILDPAKTK 118

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N  WL  +    ++R + +  +V RML  +  + R    Q ++  EF Y +LQ
Sbjct: 119 ----IQFNSEWLSELGAEGMIR-LAANQTVARMLERDDFKKRYSNGQPIAIHEFMYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGK 239
            YD V +    +  +++GG+DQ  N++ G +L +         LT PLL    G  KM K
Sbjct: 174 GYDSVAM----ETDVELGGTDQKFNLLMGRELQKAHGQKPQVVLTMPLLVGLDGEKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINE 297
           +    I +++   +P   +    +I D  + ++ + L+  P++EI  +      GK   +
Sbjct: 230 SAHNYIGISE---APSEMFGKIMSISDDLMWNYYELLSFRPLNEIADLKAGVEAGKNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K  +A EI    H   +A+ A    +  F  +     MP       +   G+ +  L+ 
Sbjct: 287 VKVALAKEIIARFHSEADADAAEQEFVNRFAKNQIPDEMPEF-----DFDAGLPVSNLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +AG   ST+EA R +K  A KI+   +++ K   +       G      GK+      +
Sbjct: 342 EAGLCASTSEAMRMVKQGAAKIDGEKVADSKFAPEA------GTYVFQVGKRKFARITI 394


>gi|78355275|ref|YP_386724.1| tyrosyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|115305805|sp|Q316W7|SYY_DESDG RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|78217680|gb|ABB37029.1| tyrosyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 395

 Score =  409 bits (1051), Expect = e-112,   Method: Composition-based stats.
 Identities = 99/397 (24%), Positives = 170/397 (42%), Gaps = 26/397 (6%)

Query: 23  NPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSII 81
           +  EL    ++G  +    G+D TA  LH GH   +  L   Q+ GH  I L+G  T +I
Sbjct: 17  DEEELKKKLAKGRPLRVKAGFDPTAPDLHLGHTVLIHKLRHFQELGHTVIFLIGDFTGMI 76

Query: 82  GDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLL 141
           GDPS R E+R  +  +++ +N E  K      +     +    +  N  W+      D +
Sbjct: 77  GDPSGRSETRPPLTREQVLQNAETYKKQVFKILDPEKTE----VRFNSEWMDKFGAADFI 132

Query: 142 REIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSD 201
           R + S ++V RML  +    R +   ++S  EF Y ++Q YD V L    +  +++GG+D
Sbjct: 133 R-LASRYTVARMLERDDFEKRYRSNMTISIHEFLYPLVQGYDSVAL----EADVELGGTD 187

Query: 202 QWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQY 260
           Q  N++ G  L  +        LT P+L    G  KM K+L   + +++    P + +  
Sbjct: 188 QKFNLLVGRHLQSQEGQEPQCVLTVPILEGLDGVKKMSKSLGNYVGIDEP---PADMFGK 244

Query: 261 WRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAKKIIATEITTMVHGREEAE 317
             ++ D  +  + + +TT  + EI  + +           AK+ +A  IT   HG ++A 
Sbjct: 245 LMSVSDELMWRYYELITTKTLDEIAELQRRVASGELHPKTAKEELAEHITAQYHGSDKAA 304

Query: 318 KAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAI 377
           +A       F        MP  S S  E S        +  +G A S  EA+R +K  A+
Sbjct: 305 EARQGFNAVFAQGCVPDDMPEFSCSCGEDSTPPAF---LADSGLAGSRGEAKRLIKQGAL 361

Query: 378 KINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            ++   + +    +        G   +  GKK  +  
Sbjct: 362 SLDGEKLDDPNTPLTA------GEYVVRLGKKRFLRL 392


>gi|30249402|ref|NP_841472.1| tyrosyl-tRNA synthetase [Nitrosomonas europaea ATCC 19718]
 gi|75540516|sp|Q82UQ1|SYY_NITEU RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|30138765|emb|CAD85342.1| t-RNA synthetase, class Ib [Nitrosomonas europaea ATCC 19718]
          Length = 409

 Score =  409 bits (1051), Expect = e-112,   Method: Composition-based stats.
 Identities = 101/410 (24%), Positives = 173/410 (42%), Gaps = 22/410 (5%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            L  RG    +        L     +    G+D TA  LH GH   L  L  LQ  GH  
Sbjct: 10  QLIRRGCQELLIEEEFAQKLAQGRPLRVKAGFDPTAPDLHLGHTVLLNKLRQLQDLGHHI 69

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           + L+G  T +IGDPS +  +R  +  ++I +N +         +K         ++ N +
Sbjct: 70  LFLIGDFTGMIGDPSGKSATRPPLTREQITQNADTYASQVFKILK----PEQTEVVFNSS 125

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           W+      D++R + + ++V RML  +    R    + ++  EF Y ++Q YD V L  +
Sbjct: 126 WMDKFSAADVIR-LAATYTVARMLERDDFSKRYHENRPIAIHEFLYPLVQGYDSVALKAD 184

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNK 249
               L++GG+DQ  N++ G +L +    P    LT PLL    G  KM K+L+  + +N+
Sbjct: 185 ----LELGGTDQKFNLLVGRELQKHYGQPPQCILTMPLLEGLDGIQKMSKSLNNYVGINE 240

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKKIIATEIT 307
              SP   +    ++ D  +  + + L+   +  + +       G    E K   A EI 
Sbjct: 241 ---SPAEIFGKLMSVSDTLMWRYIELLSFESLETVRQWQNEVESGCNPREIKMRFAREIV 297

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
              H + +A +AA      F   +    +P   +   +   G+ L  L+  AG   ST+E
Sbjct: 298 ARFHSQTDAVRAAEEFEARFSKGVIPDDIPEKKLYIQD--AGLALPQLLKLAGLTASTSE 355

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           A R ++   +K+N   +S++   I      S   +    GK+      L 
Sbjct: 356 ALRMIEQGGVKLNGDKVSDKTRIIP-----SNVTVIAQIGKRKFAKVTLV 400


>gi|291614904|ref|YP_003525061.1| tyrosyl-tRNA synthetase [Sideroxydans lithotrophicus ES-1]
 gi|291585016|gb|ADE12674.1| tyrosyl-tRNA synthetase [Sideroxydans lithotrophicus ES-1]
          Length = 398

 Score =  408 bits (1050), Expect = e-112,   Method: Composition-based stats.
 Identities = 96/397 (24%), Positives = 176/397 (44%), Gaps = 23/397 (5%)

Query: 24  PRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIG 82
             ELD   ++G  +    G+D TA  LH GH   L  +  LQ  GH  + L+G  T +IG
Sbjct: 20  ESELDKKLAEGRPLRIKAGFDPTAPDLHLGHTVLLNKMRQLQDLGHHALFLIGDFTGMIG 79

Query: 83  DPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLR 142
           DP+ ++ +R  +  +++  N +  K      +          ++ N  W+     +DL++
Sbjct: 80  DPTGKNATRPPLSREQVLANAQSYKDQVFKVLD----PNKTEVVFNSAWMDKFSAVDLIK 135

Query: 143 EIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQ 202
              +  +V +ML  +    R K  Q ++  EF Y ++Q YD V L  +    L++GG+DQ
Sbjct: 136 LAATH-TVAQMLERDDFGKRYKASQPIAIHEFIYPLVQGYDSVALKAD----LELGGTDQ 190

Query: 203 WGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYW 261
             N++ G +L      P    LT PLL    G  KM K+L   + +     +P + +   
Sbjct: 191 KFNLLMGRELQRHFGQPAQCVLTMPLLEGLDGVNKMSKSLGNYVGIT---DTPQDMFGKL 247

Query: 262 RNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKKIIATEITTMVHGREEAEKA 319
            +I D  +  + + L+   +++I         G+   + K ++A EI    H ++ AE A
Sbjct: 248 MSISDDLMWRYLELLSFRSLAQIAHWRDEVNGGRNPRDIKVLLAQEIVARFHSQKAAEDA 307

Query: 320 ATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKI 379
                  F   +    MP +++    V   + +  L+ +A    ST+EA R +    +K+
Sbjct: 308 LAEFEARFQKGVLPDDMPELTVQS--VDGSIAIANLLKQANLVASTSEALRMIDQGGVKL 365

Query: 380 NNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +   +S++ LQ+K         +    GK+     ++
Sbjct: 366 DGEKVSDKSLQLKA-----GAVVVAQVGKRKFGRINV 397


>gi|187918237|ref|YP_001883800.1| tyrosyl-tRNA synthetase [Borrelia hermsii DAH]
 gi|254783573|sp|B2S074|SYY_BORHD RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|119861085|gb|AAX16880.1| tyrosyl-tRNA synthetase [Borrelia hermsii DAH]
          Length = 406

 Score =  408 bits (1050), Expect = e-112,   Method: Composition-based stats.
 Identities = 162/409 (39%), Positives = 248/409 (60%), Gaps = 8/409 (1%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L IL +RGF+ Q +N   L +L  +  +  Y+G D T++SLH GHL   M +  LQ+ GH
Sbjct: 5   LGILEKRGFLKQCTNLEALSVLMDREKMVFYVGVDATSTSLHIGHLIPFMAMAHLQRQGH 64

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
            PI+L+GGGT+ IGDPS +D  R+++  ++I+ N++ IK      I +  G     +++N
Sbjct: 65  IPIALVGGGTTKIGDPSGKDVMRKILPKEDIEANVKAIKEQLLRIIDFSHG----YIIDN 120

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL +I YI+ LR+IG +FSVNRML FE+ + RLK    LSF+EFNY +LQ+YDF  L 
Sbjct: 121 SEWLDNINYIEFLRDIGVYFSVNRMLGFETYKRRLK--DGLSFIEFNYQLLQSYDFYMLN 178

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
           K  +C+LQ+GG DQWGNI+ G+DL +R    ++F LT PL+T + G KMGK+  GA++L+
Sbjct: 179 KLKNCKLQIGGDDQWGNIVSGVDLVKRKLGTEVFGLTLPLITRSDGKKMGKSEKGAVYLD 238

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITT 308
            ++ S Y+F+QY+RN+ D DV  F    T L   EI+ ++  QG  +N+AK+ +A EIT 
Sbjct: 239 SKLYSVYDFYQYFRNVPDLDVKKFLYLFTFLEDDEIEHISSFQGYLLNKAKETLAFEITK 298

Query: 309 MVHGREEAEKAATAAMECFDMSI-HSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
           +VHG   A KA++AA   F         +P   ++   +   + L+ L+V +   +S +E
Sbjct: 299 IVHGESAALKASSAASAAFKGGEGDKSDIPFFKLALTSLEGTILLVDLMVSSKIVSSKSE 358

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           ARR + S  + ++   I ++   +    F + G I+L  GKK  +   L
Sbjct: 359 ARRLISSGGVYVDKVRIGDQNYCLNKDSF-ANGAIELRIGKKKILRIIL 406


>gi|260914249|ref|ZP_05920722.1| tyrosine-tRNA ligase [Pasteurella dagmatis ATCC 43325]
 gi|260631882|gb|EEX50060.1| tyrosine-tRNA ligase [Pasteurella dagmatis ATCC 43325]
          Length = 395

 Score =  408 bits (1049), Expect = e-112,   Method: Composition-based stats.
 Identities = 107/419 (25%), Positives = 185/419 (44%), Gaps = 28/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M    +  L+ L  RG    +S    ++ L     +   +G D TA  +H GH   L  L
Sbjct: 1   MTDINT-VLAELK-RGVDEVLSEADLIEKLKENRPLRVKLGADPTAPDIHLGHTVVLNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+ I L+G  T ++GDPS ++ +R  +  +++  N E  K      +     +
Sbjct: 59  RQFQQFGHEVIFLIGDFTGMVGDPSGKNSTRPPLSREDVLRNAETYKQQIYKILDPQKTR 118

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               ++ N +WL  +    ++R + S ++V RML  +  + R    Q ++  EF Y +LQ
Sbjct: 119 ----IVFNSSWLGELGTEGMIR-LTSNYTVARMLERDDFKKRFANNQPIAIHEFIYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGK 239
            YD V L    +  +++GG+DQ  N++ G +L +        A+T PLL    G  KM K
Sbjct: 174 GYDSVAL----EADIELGGTDQKFNLLVGRELQKSAGQKPQVAITLPLLVGLDGEKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINE 297
           +L   I + +   +P   +    +I D  +  +   L+  P++EI+  +     G+   +
Sbjct: 230 SLGNYIGVTE---TPSEMFGKIMSISDDLMWDWYNLLSFRPLTEIEQLKQEVENGRNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A EI +  H   +AE A    +  F        MP  +         MGL  L+ 
Sbjct: 287 VKVLLAKEIISRFHSNTDAEAAEQEFINRFQKGAIPDEMPEFT-----FEGEMGLANLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +A    ST+EA R ++   +KI+   + + KL I       TG      GK+      +
Sbjct: 342 EASLVVSTSEANRMVQQGGVKIDGHKVEDAKLIIS------TGTSVYQVGKRKFARVTI 394


>gi|194886727|ref|XP_001976671.1| GG19890 [Drosophila erecta]
 gi|190659858|gb|EDV57071.1| GG19890 [Drosophila erecta]
          Length = 464

 Score =  408 bits (1049), Expect = e-111,   Method: Composition-based stats.
 Identities = 130/439 (29%), Positives = 216/439 (49%), Gaps = 29/439 (6%)

Query: 5   KSDFLSILSERGFIHQISNPRE---LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
           + + L  L++RGF   I        +  L + G  + Y G+D TA SLH G+L  +M L 
Sbjct: 25  QRNLLE-LTDRGFFQGIFPDTAAPRMKQLFTGGQQSIYAGFDPTADSLHVGNLLVIMGLI 83

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFI------- 114
             Q+ GH+PI+L+GG T +IGDPS R   R  +    I+ N++ I+              
Sbjct: 84  HCQRAGHRPIALVGGATGLIGDPSGRKTERNQLGETVIETNLKAIEQQLRRVFENHEHCL 143

Query: 115 ----KYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLS 170
               K         ++NN  W   ++ ID +  +G  F +  MLS  SV+SRL+ E  +S
Sbjct: 144 WDSNKQKFPLPPLTVVNNADWYADLQLIDFVANMGRHFRMGSMLSRSSVQSRLESEDGMS 203

Query: 171 FLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLL 229
           F EF Y I QAYD++ L + ++C  QMGGSDQ GN++ G +L  R++   ++F LT PL+
Sbjct: 204 FTEFTYQIFQAYDWLHLLRRHNCCFQMGGSDQTGNLMTGHELISRVERKREVFGLTLPLV 263

Query: 230 TTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK 289
           TT  G K GK+   A+WL+   TSP+  +Q++  + D++V    K  T +P+ +++++ +
Sbjct: 264 TTEEGDKFGKSAGNAVWLDGNKTSPFALYQFFLRMPDSEVEKLLKLFTFIPLPQVEQLMR 323

Query: 290 LQGKEI--NEAKKIIATEITTMVHGREEAEKAATAAMECFDM---SIHSQHMPTI----- 339
              KE    +A+ ++A ++T +VHG    ++A       +      +   ++P I     
Sbjct: 324 EHTKEPEKRKAQTLLAEDVTLLVHGESGLKQAERVTNALYKGNVEGLAELNLPEIQQTFQ 383

Query: 340 --SISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ-DF 396
             ++       GM +L L +KA    +  +A R + +    +N   + N    +      
Sbjct: 384 GATMVNLLTEPGMSILELAMKAKCFPTETDAVRIINAGGFYVNQKRVQNIAEVLTTGVHI 443

Query: 397 DSTGNIKLSFGKKNHIICH 415
              G   L  GK+N  I  
Sbjct: 444 LRNGISLLRVGKRNFYIVR 462


>gi|222099167|ref|YP_002533735.1| Tyrosyl-tRNA synthetase [Thermotoga neapolitana DSM 4359]
 gi|221571557|gb|ACM22369.1| Tyrosyl-tRNA synthetase [Thermotoga neapolitana DSM 4359]
          Length = 394

 Score =  408 bits (1048), Expect = e-111,   Method: Composition-based stats.
 Identities = 105/410 (25%), Positives = 188/410 (45%), Gaps = 27/410 (6%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           + IL  R  +  +S    LD +  +G +   +G D +   LH GH   L  L   Q  GH
Sbjct: 7   VKILK-RNVVDLVSEEELLDRIRRKGKLRVKLGVDPSRPDLHLGHAVVLRKLREFQDLGH 65

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
             + ++G  T+ IGDPS R+E+R M+  +E+ EN +  +      +     +    +  N
Sbjct: 66  TVVLIIGDFTARIGDPSGRNETRPMLTKEEVLENAKTYQEQAFKILDPERTE----LRFN 121

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL  + + D++  + S ++V RML  +    R +    ++  EF Y + QAYD V + 
Sbjct: 122 GEWLDRMTFADVI-VLASKYTVARMLERDDFARRFREGIPITISEFLYPLAQAYDSVAIQ 180

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWL 247
            +    +++GG+DQ  N++ G  + E         +T P++    G  KM K+    I  
Sbjct: 181 AD----VELGGTDQLFNLLVGRKIQEEYGQEPQIVMTMPIIEGTDGKLKMSKSYGNYIAF 236

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGK-EINEAKKIIAT 304
           N    +P + +    +I D  ++ + + LT +P  +I+   +   +GK    + K ++A 
Sbjct: 237 N---DTPEDMYGKLMSIPDELIIKYMRLLTDIPEEQIEEYERKMKEGKINPRDVKMVLAY 293

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           EIT   HG E A+KA    ++ F        MP + +S++     M ++ L+VK G  +S
Sbjct: 294 EITRFFHGEENAKKAQEHFVKVFQRKELPDEMPVVELSQE-----MNIVDLLVKIGAVSS 348

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +EA+R +    + ++   + + K  +K       G   L  GKK     
Sbjct: 349 RSEAKRLISQGGVYLDGERVEDIKFIVKP-----DGERVLRVGKKKFYRI 393


>gi|207727940|ref|YP_002256334.1| tyrosyl-trna synthetase protein [Ralstonia solanacearum MolK2]
 gi|206591183|emb|CAQ56795.1| tyrosyl-trna synthetase protein [Ralstonia solanacearum MolK2]
          Length = 433

 Score =  408 bits (1048), Expect = e-111,   Method: Composition-based stats.
 Identities = 103/414 (24%), Positives = 186/414 (44%), Gaps = 30/414 (7%)

Query: 11  ILSERG----FIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
            +++RG     I      +      +   +   +G D TA  +H GH   L  +  LQ  
Sbjct: 43  EITQRGCDELLIAAEWEQKLARSAATGVPLRIKLGLDPTAPDIHIGHTVVLNKMRQLQDL 102

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+ I L+G  TS IGDPS R+ +R  +  ++I+ N +      S  +     +    + 
Sbjct: 103 GHQVIFLIGDFTSTIGDPSGRNATRPPLTREQIEANAQTYYRQASMVLDPSKTE----IR 158

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
            N  W   +    ++ ++ + ++V RM+  +    R K    +S  EF Y ++Q YD V 
Sbjct: 159 YNSEWSDPLGARGMI-QLAARYTVARMMERDDFTKRYKAGVPISVHEFLYPLMQGYDSVA 217

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAI 245
           L  +    L++GG+DQ  N++ G +L +         LT PLL    G  KM K+    +
Sbjct: 218 LKSD----LELGGTDQKFNLLVGRELQKEYGQEPQCILTMPLLVGLDGVEKMSKSKGNYV 273

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKKIIA 303
            + +    P   +    +I D  + ++   L+  PM+EI+RM +    G+   + K ++A
Sbjct: 274 GIAE---VPGEMFGKLMSISDDLMWTYFTLLSFRPMAEIERMKQEVALGRNPRDCKVLLA 330

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
            EI    H + +AE+A                +P I +S       +G+  L+ +AG   
Sbjct: 331 QEIIARFHSQADAERALEDF-NHRARGGVPDDIPQIELS----GAPIGIAQLLKQAGLCP 385

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           ST+EA R+++   +KI+ ++IS++ L+++       G   +  GK+      L 
Sbjct: 386 STSEANRNIEQGGVKIDGTVISDKGLKVEA------GTFVMQVGKRRFARVVLS 433


>gi|56475931|ref|YP_157520.1| tyrosyl-tRNA synthetase [Aromatoleum aromaticum EbN1]
 gi|81358432|sp|Q5P7U2|SYY_AZOSE RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|56311974|emb|CAI06619.1| t-RNA synthetase, class Ib [Aromatoleum aromaticum EbN1]
          Length = 399

 Score =  408 bits (1048), Expect = e-111,   Method: Composition-based stats.
 Identities = 101/419 (24%), Positives = 186/419 (44%), Gaps = 24/419 (5%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M   ++     L +RG    +     ++ L S   +    G+D TA  LH GH   L  L
Sbjct: 1   MTDVQAAL--ELIKRGAEELLVEAELVEKLESDRPLRVKAGFDPTAPDLHLGHTVLLNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+ + L+G  T++IGDPS ++ +R  +  ++I EN    +      +     +
Sbjct: 59  RHFQELGHQVMFLVGDFTAMIGDPSGKNATRPPLSREQILENARTYQEQVFKILDPDKTE 118

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N +W+ S+    ++R + S ++V RML  +    R    Q+++  EF Y + Q
Sbjct: 119 ----ICFNSSWMESLGTAGMIR-LASRYTVARMLERDDFAKRYAGGQAIAIHEFLYPLCQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGK 239
            YD V +  +    +++GG+DQ  N++ G +L +  +      L  PLL    G  KM K
Sbjct: 174 GYDSVAMRAD----VELGGTDQKFNLLVGRELQKHDRQAPQCVLMMPLLEGLDGVNKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINE 297
           +L   I + +   +P   +    +I D+ +  +   L+  P  EI R       G+   E
Sbjct: 230 SLGNYIGITE---APREIFGKIMSISDSLMWRYFDLLSFHPAVEIARYRAEVEGGRNPRE 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A EI    H    AE A       F   +    +P +++   +   G+ +  ++ 
Sbjct: 287 LKVLLAQEIVARFHSHAAAEDALADFEARFQRGVLPDDIPEVNVVVGD--GGLPVFQVVK 344

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +AG   ST+EA R ++  A+++N   + ++ L ++         + L  GK+      L
Sbjct: 345 QAGLTGSTSEALRMIEQGAVRLNGERVEDKGLVLQ-----RDQTVVLQVGKRKFASVVL 398


>gi|52425287|ref|YP_088424.1| tyrosyl-tRNA synthetase [Mannheimia succiniciproducens MBEL55E]
 gi|81387049|sp|Q65T71|SYY_MANSM RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|52307339|gb|AAU37839.1| TyrS protein [Mannheimia succiniciproducens MBEL55E]
          Length = 395

 Score =  408 bits (1048), Expect = e-111,   Method: Composition-based stats.
 Identities = 101/412 (24%), Positives = 181/412 (43%), Gaps = 27/412 (6%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L+ L  RG    +S    ++ L     +   +G D TA  +H GH   L  L   Q  G
Sbjct: 7   VLAELK-RGVDEVLSEADLIEKLKENRPLKIKLGADPTAPDIHLGHTVVLNKLRQFQNFG 65

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+ I L+G  T ++GDPS ++++R  +  +++  N E  K      +     +    ++ 
Sbjct: 66  HEVIFLIGDFTGMVGDPSGKNKTRPPLSREDVLRNAETYKQQIYKILDPQKTR----IVF 121

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  +    ++R + S ++V RML  +  + R   +Q ++  EF Y +LQ +D V L
Sbjct: 122 NSDWLGKLGTEGMIR-LASNYTVARMLERDDFKKRFTEKQPIAIHEFIYPLLQGHDSVAL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIW 246
               +  +++GG+DQ  N++ G +L +        A+T PLL    G  KM K+L   I 
Sbjct: 181 ----EADVELGGTDQKFNLLVGRELQKSAGQKPQVAMTLPLLVGLDGEKKMSKSLGNYIG 236

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIAT 304
           +     +P + +    +I D  +  +   L+  P++EI +  +    G+   + K ++A 
Sbjct: 237 VT---DAPNDMFGKIMSISDDLMWDWYDLLSFRPLTEIAQFKEEVKNGRNPRDVKILLAK 293

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           EI    H   +A+ A    +  F        MP  +         +GL  L+ +AG   S
Sbjct: 294 EIIARFHSEADADTAEQEFINRFQKGAMPDEMPEFT-----FEGEIGLANLLKEAGLVAS 348

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           T+EA R ++ + +KI+   + + K  I               GK+      +
Sbjct: 349 TSEANRMVQQDGVKIDGEKVEDAKTTISASTH------VYQVGKRKFARVTV 394


>gi|261250298|ref|ZP_05942874.1| tyrosyl-tRNA synthetase [Vibrio orientalis CIP 102891]
 gi|260939414|gb|EEX95400.1| tyrosyl-tRNA synthetase [Vibrio orientalis CIP 102891]
          Length = 395

 Score =  408 bits (1048), Expect = e-111,   Method: Composition-based stats.
 Identities = 100/419 (23%), Positives = 176/419 (42%), Gaps = 28/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M + ++    I  +RG    I     +  L     +   +G D TA  +H GH   L  L
Sbjct: 1   MASIEAALAEI--KRGVDELIPEEELIAKLKEGRPLRIKLGADPTAPDIHLGHTVILNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH    L+G  T ++GDP+ ++ +R  +  +++  N E  K      +     K
Sbjct: 59  RAFQELGHDVTFLIGDFTGMVGDPTGKNTTRPPLTREDVLRNAETYKEQVFKILDPAKTK 118

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N  WL  +    ++R + +  +V RML  +  + R    Q ++  EF Y +LQ
Sbjct: 119 ----IQFNSEWLSELGAEGMIR-LAANQTVARMLERDDFKKRYTGGQPIAIHEFMYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGK 239
            YD V +    +  +++GG+DQ  N++ G +L +         LT PLL    G  KM K
Sbjct: 174 GYDSVAM----ETDVELGGTDQKFNLLMGRELQKAHGQKPQVVLTMPLLVGLDGEKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINE 297
           +    I +++   +P   +    +I D  + S+ + L+  P+ EI  +      GK   +
Sbjct: 230 SAHNYIGVSE---APSEMFGKIMSISDDLMWSYYELLSFRPLEEIAELKAGVEAGKNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K  +A EI    H   +A+ A    +  F  +     MP       +   G+ +  ++ 
Sbjct: 287 VKVALAKEIIARFHTEADADAAEQEFVNRFAKNQIPDEMPEF-----DFDAGLPVSNILK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +AG   ST+EA R +K  A KI+   +++ K           G      GK+      +
Sbjct: 342 EAGLCASTSEAMRMVKQGAAKIDGEKVADSKFAPDA------GTYVFQVGKRKFARITI 394


>gi|15643244|ref|NP_228288.1| tyrosyl-tRNA synthetase [Thermotoga maritima MSB8]
 gi|81553099|sp|Q9WYU8|SYY_THEMA RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|4980991|gb|AAD35566.1|AE001725_11 tyrosyl-tRNA synthetase [Thermotoga maritima MSB8]
          Length = 401

 Score =  408 bits (1048), Expect = e-111,   Method: Composition-based stats.
 Identities = 105/410 (25%), Positives = 184/410 (44%), Gaps = 27/410 (6%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           + IL  R  +  IS    LD +  +G +   +G D +   LH GH   L  L   Q  GH
Sbjct: 7   VKILK-RNVVDLISEEELLDRIKRKGKLRVKLGVDPSRPDLHLGHAVVLRKLREFQDLGH 65

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
             + ++G  T+ IGDPS R+E+R M+  +E+ EN +  +      +     +    +  N
Sbjct: 66  TVVLIIGDFTARIGDPSGRNETRPMLTKEEVLENAKTYQEQAFKILDPKRTE----LRFN 121

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL  + + D++  + S ++V RML  +    R K    ++  EF Y + QAYD V + 
Sbjct: 122 GEWLDRMTFADVII-LASKYTVARMLERDDFAKRFKEGIPIAISEFLYPLAQAYDSVAIQ 180

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWL 247
            +    +++GG+DQ  N++ G  + E         +T P++    G  KM K+    I  
Sbjct: 181 SD----VELGGTDQLFNLLVGRKIQEEYGQEPQIVMTMPIIEGTDGKLKMSKSYGNYIAF 236

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAKKIIAT 304
           N     P   +    +I D  ++ + + LT +P   I+   +   +      + K ++A 
Sbjct: 237 N---DPPEEMYGKLMSIPDELIIKYMRLLTDIPEERIEEYERKMKEKTINPRDVKMVLAY 293

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           EIT   HG E A+KA    ++ F        MP + IS+++      ++ L+V+ G A+S
Sbjct: 294 EITRFFHGEENAKKAQEHFVKVFQKKEIPDEMPVVEISQEK-----NIVDLLVEIGAASS 348

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +EA+R +    + I+   I + K  ++       G   L  GK+     
Sbjct: 349 KSEAKRLVSQGGVYIDGERIEDIKFTVEP-----DGERVLRVGKRKFYRI 393


>gi|13508408|ref|NP_110358.1| tyrosyl tRNA synthetase [Mycoplasma pneumoniae M129]
 gi|2501075|sp|P75122|SYY_MYCPN RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|1673835|gb|AAB95821.1| tyrosyl tRNA synthetase [Mycoplasma pneumoniae M129]
          Length = 399

 Score =  407 bits (1047), Expect = e-111,   Method: Composition-based stats.
 Identities = 150/411 (36%), Positives = 229/411 (55%), Gaps = 19/411 (4%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
            D L++L ERG   Q +  +EL  L +QG    Y+G+D TA SLH G+   L +    Q 
Sbjct: 3   KDLLALLKERGLFVQANFEKELKQLLNQGSFAFYVGFDPTAPSLHIGNYVLLHVAQIFQA 62

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH P  L+G GT++IGDP+ R E R+MM  + I EN   IK     F+      ++ + 
Sbjct: 63  MGHIPHVLLGSGTALIGDPTGRMELRQMMSRETIAENTRNIKKQIRRFL-----GSNVVF 117

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
             NETWL  + YI+++RE+G  FSVN+ML+ ++  +R +R   L+ +E NYM+LQAYDF 
Sbjct: 118 CQNETWLKKLNYIEVIRELGPCFSVNKMLATDAFSARWER--GLTLMELNYMVLQAYDFY 175

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L + Y  +LQ+GGSDQW NI+ G DL  R    +++ +T+ LL  A+G KMGK+ SGA+
Sbjct: 176 YLNQKYGVQLQIGGSDQWANILAGADLIRRKTQKQVYGMTTNLLVKANGEKMGKSASGAL 235

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
           WL+ + TSPY+F+QYW N+DDA +      LT L    I+ +  L+G  I EAK  +A E
Sbjct: 236 WLDPQKTSPYDFYQYWINLDDASLQKVFLMLTKLDTKAIETLCNLKGAAIKEAKAKLAFE 295

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           +T  +HG + A  A   +   F     ++           V  G  L+ +IV  G   S 
Sbjct: 296 LTDAIHGTKAALVAQAKSARIFAFQPDTE--------TKTVRAGTRLVDVIVDLGLVVSR 347

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +EARR ++   + IN   +++ ++ ++      +  + +  GKK  +   +
Sbjct: 348 SEARRVIQQGGLTINQEKVTDVEMVLQAS----SQPLVIGKGKKRFVTVQV 394


>gi|15834952|ref|NP_296711.1| tyrosyl-tRNA synthetase [Chlamydia muridarum Nigg]
 gi|270285124|ref|ZP_06194518.1| tyrosyl-tRNA synthetase [Chlamydia muridarum Nigg]
 gi|301336519|ref|ZP_07224721.1| tyrosyl-tRNA synthetase [Chlamydia muridarum MopnTet14]
 gi|14195229|sp|Q9PKX8|SYY_CHLMU RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|7190374|gb|AAF39195.1| tyrosyl-tRNA synthetase [Chlamydia muridarum Nigg]
          Length = 412

 Score =  407 bits (1047), Expect = e-111,   Method: Composition-based stats.
 Identities = 139/421 (33%), Positives = 222/421 (52%), Gaps = 25/421 (5%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            +  L +RG +   S    L+ L +   V+AY+G+D TA SLH GH   +  L  L   G
Sbjct: 4   LIDSLQKRGILDNSS--AGLESLTA--PVSAYLGFDPTAPSLHIGHWIGICFLRRLSAYG 59

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
             PI+L+GG T +IGDPS +   R ++  +++ +N +KI+   ++++       D  ++N
Sbjct: 60  ITPIALVGGATGMIGDPSGKSVERSLLDQEQVLDNSKKIEVALANYL------PDIRIVN 113

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL S+  +D LR+IG +F +  ML+ + V+ R+  E+ +S+ EF+Y++LQ+YDF  L
Sbjct: 114 NADWLGSLSMVDFLRDIGKYFRLGSMLAKDVVKQRVYSEEGISYTEFSYLLLQSYDFAHL 173

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            K++   LQ GGSDQWGNI  GID   R    + F LT PLLT + G K+GKT SG +WL
Sbjct: 174 FKHHGVVLQCGGSDQWGNITSGIDYIRRKGLGQAFGLTYPLLTDSKGKKIGKTESGTVWL 233

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           + E+TSPY  +QY+  + D ++   A+ LT L   E+  + K    +    K+ +A  I 
Sbjct: 234 DPELTSPYELFQYFLRLSDQEIPKIARMLTLLDDDEVLALDKRLENDPQAVKRYVAEVIV 293

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGL------------LTL 355
             VHG E   +A       F      +++    ++   V  G+G+            L +
Sbjct: 294 KDVHGAEGLAQALATTESFFANKG--KNITESELAAL-VQSGVGINVARADVIGKRWLDV 350

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +V+ GF +S  EARR ++   + +N   + +E+  +          I LS GKK   +  
Sbjct: 351 VVQLGFCSSKGEARRLIQQRGLYVNQEPLIDEQSVLDGTYLCFDRYILLSQGKKKKQVID 410

Query: 416 L 416
           L
Sbjct: 411 L 411


>gi|320354886|ref|YP_004196225.1| tyrosyl-tRNA synthetase [Desulfobulbus propionicus DSM 2032]
 gi|320123388|gb|ADW18934.1| tyrosyl-tRNA synthetase [Desulfobulbus propionicus DSM 2032]
          Length = 404

 Score =  407 bits (1047), Expect = e-111,   Method: Composition-based stats.
 Identities = 104/411 (25%), Positives = 180/411 (43%), Gaps = 27/411 (6%)

Query: 12  LSERGFIHQISNPRELDILCSQ----GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           L ERG +   S    +  L         +    G+D TA  LH GH   L  L   Q  G
Sbjct: 10  LIERGAVDFHSREDLVKKLTRSLETGKPLIVKAGFDPTAPDLHLGHTVLLQKLRHFQLLG 69

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+   L+G  T +IGDP+ + ++R  +  ++++ N E  K      +     K    ++ 
Sbjct: 70  HEVNFLIGDFTGLIGDPTGKSDTRPPLTPEDVKRNAETYKEQVFKILDPQKTK----VVF 125

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N TWL  +   +++R + S  +V RML  +  + R +  + +S  EF Y ++Q YD V +
Sbjct: 126 NSTWLGQLSSYEMIR-LASELTVARMLERDDFKKRFESNRPISIHEFLYPLIQGYDSVAM 184

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIW 246
             +    +++GG+DQ  N++ G DL           LT PLL    G  KM K+L   I 
Sbjct: 185 KAD----VELGGTDQLFNVLMGRDLQRSRGQEPQVVLTMPLLEGLDGVNKMSKSLGNYIG 240

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAKKIIA 303
           +++    P + +    +I D  +  + + L+ L + EI  +     +        K  +A
Sbjct: 241 ISEP---PDSIFGKIMSISDDLMFRYYELLSDLSLEEIQALKTKIARGELHPKAVKVQLA 297

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
            E+ T  H RE AE A     + F      + +  + ++  E    + +  L++ AG   
Sbjct: 298 KEMVTRFHDREAAENAERNFEQVFARHELPEDIEEVRLAVAEAE--IWVPKLLLDAGLVK 355

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           ST++ RR ++ +A+ I    IS+    +  +     G I L  GK+     
Sbjct: 356 STSDGRRMIQQHAVTIEGEKISDINAVVPTK-----GEILLKVGKRRFCRV 401


>gi|74316477|ref|YP_314217.1| tyrosyl-tRNA synthetase [Thiobacillus denitrificans ATCC 25259]
 gi|115305829|sp|Q3SLJ8|SYY_THIDA RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|74055972|gb|AAZ96412.1| tyrosyl-tRNA synthetase, class Ib [Thiobacillus denitrificans ATCC
           25259]
          Length = 396

 Score =  407 bits (1047), Expect = e-111,   Method: Composition-based stats.
 Identities = 94/411 (22%), Positives = 178/411 (43%), Gaps = 23/411 (5%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L  +  RG    +     ++ L +   +    G+D TA  LH GH   L  L   Q  GH
Sbjct: 5   LQEIK-RGADELLVEAELVEKLKTGRPLRIKAGFDPTAPDLHLGHTVLLNKLRQFQVLGH 63

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           + + L+G  T +IGDP+ ++ +R  +  + + EN +  +      +     +    +  N
Sbjct: 64  RIVFLIGDFTGMIGDPTGKNATRPPLTREAVAENAKTYQEQVFKVLDPALTE----VRFN 119

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             W+  +  + ++R   +  +V RML  +  + R   ++ ++  EF Y ++Q YD VEL 
Sbjct: 120 SEWMEGLGSVGMIRLAATH-TVARMLERDDFQKRYSSQKPIAIHEFLYPLIQGYDSVELK 178

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWL 247
            +    +++GG+DQ  N++ G +L +    P    LT PLL    G  KM K+L   I +
Sbjct: 179 AD----VELGGTDQKFNLLMGRELQKHYGQPPQCILTMPLLEGTDGVNKMSKSLGNYIGI 234

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATE 305
           N+   +P   +    +I DA +  +   L+   ++ I+  R     G    E K   A E
Sbjct: 235 NE---APGQIFGKLMSISDALMWRYIDLLSFESIARIEGWRSDVAAGLNPREVKVAFAQE 291

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           I    HG + A  A       F   +    MP + +    +  G+ +  L+ +AG  +ST
Sbjct: 292 IVGRFHGDKAARDAVAEFEARFQRGVLPDDMPEVDLHG--IDGGLPVPQLLKQAGLVSST 349

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           ++A R +    ++++   ++++   +          +    GK+      +
Sbjct: 350 SDAIRQIAGGGVRLDGERVTDKGQSVPA-----GATVVAQVGKRKFARVTV 395


>gi|167855747|ref|ZP_02478502.1| alanine racemase [Haemophilus parasuis 29755]
 gi|167853144|gb|EDS24403.1| alanine racemase [Haemophilus parasuis 29755]
          Length = 396

 Score =  407 bits (1046), Expect = e-111,   Method: Composition-based stats.
 Identities = 105/419 (25%), Positives = 179/419 (42%), Gaps = 27/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M       L+ L  RG     S    ++ L     +   +G D TA  +H GH   L  L
Sbjct: 1   MTQSIETILAELK-RGVEDVYSEADLIEKLKENRPLRVKLGADPTAPDIHLGHTVVLNKL 59

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GH+ I L+G  T+ +GDPS ++ +R  +  +++  N E  K      +     +
Sbjct: 60  RQFQNFGHEVIFLIGDFTATVGDPSGKNTTRPPLSREDVLRNAETYKEQIYKILDPQKTR 119

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               ++ N  WL  +  + ++R + S ++V RML  +  + R    QS++  EF Y +LQ
Sbjct: 120 ----IVFNSDWLGELGTVGMIR-LASNYTVARMLERDDFKKRFANNQSIAIHEFIYPLLQ 174

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGK 239
            +D V L    +  +++GG+DQ  N++ G +L +        A+T PLL    G  KM K
Sbjct: 175 GHDSVAL----EADIELGGTDQTFNLLIGRELQKAAGQKPQVAMTLPLLVGLDGEKKMSK 230

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINE 297
           +L   I + +    P   +    +I D  +  +   L+  P++EI ++      GK   +
Sbjct: 231 SLGNYIGVTE---VPNEMFGKIMSISDELMWDWYNLLSFRPLTEIAQLKADVEAGKNPRD 287

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A EI    H   +A+ A    +  F        MP  +         +GL TL+ 
Sbjct: 288 VKILLAKEIIARFHSEADADAAEQEFINRFQKGAMPDEMPEFT-----FEGEIGLATLLK 342

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +AG   ST+EA R  +   +KI+   + + K           G      GK+      +
Sbjct: 343 EAGLVPSTSEAIRSAQQGGVKIDGEKVDDVKQN------AQKGTFVYQVGKRKFARVTV 395


>gi|240950106|ref|ZP_04754401.1| tyrosyl-tRNA synthetase [Actinobacillus minor NM305]
 gi|240295407|gb|EER46176.1| tyrosyl-tRNA synthetase [Actinobacillus minor NM305]
          Length = 396

 Score =  407 bits (1046), Expect = e-111,   Method: Composition-based stats.
 Identities = 105/419 (25%), Positives = 180/419 (42%), Gaps = 27/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M       L+ L  RG     S    ++ L     +   +G D TA  +H GH   L  L
Sbjct: 1   MTQPIETILAELK-RGVEDVYSEADLIEKLKENRPLRVKLGADPTAPDIHLGHTVVLNKL 59

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GH+ I L+G  T+ +GDPS ++ +R  +  +++  N E  K      +     +
Sbjct: 60  RQFQNFGHEVIFLIGDFTATVGDPSGKNATRPPLSREDVLRNAETYKEQIYKILDPQKTR 119

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               ++ N  WL  +  + ++R + S ++V RML  +  + R    QS++  EF Y +LQ
Sbjct: 120 ----IVFNSDWLGELGTVGMIR-LASNYTVARMLERDDFKKRFANNQSIAIHEFIYPLLQ 174

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGK 239
            +D V L    +  +++GG+DQ  N++ G +L +        A+T PLL    G  KM K
Sbjct: 175 GHDSVAL----EADIELGGTDQTFNLLIGRELQKAAGQKPQVAMTLPLLVGLDGEKKMSK 230

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINE 297
           +L   I + +   +P   +    +I D  +  +   L+  P++EI ++      GK   +
Sbjct: 231 SLGNYIGVTE---APNEMFGKIMSISDELMWDWYNLLSFRPLTEIAQLKADVEAGKNPRD 287

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A EI    H   +A+ A    +  F        MP  +         +GL TL+ 
Sbjct: 288 VKILLAKEIIARFHSEADADAAEQEFINRFQKGAMPDEMPEFT-----FEGEIGLATLLK 342

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +AG   ST+EA R  +   +KI+   + + K           G      GK+      +
Sbjct: 343 EAGLVPSTSEAIRSAQQGGVKIDGEKVDDVKQN------AQKGTFVYQVGKRKFARVTV 395


>gi|195353270|ref|XP_002043128.1| GM11790 [Drosophila sechellia]
 gi|194127216|gb|EDW49259.1| GM11790 [Drosophila sechellia]
          Length = 464

 Score =  407 bits (1046), Expect = e-111,   Method: Composition-based stats.
 Identities = 128/439 (29%), Positives = 217/439 (49%), Gaps = 29/439 (6%)

Query: 5   KSDFLSILSERGFIHQISNPRE---LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
           + + L  L++RGF   I        +  L + G  + Y G+D TA SLH G+L  +M L 
Sbjct: 25  QKNLLE-LTDRGFFQGIFPDTAAPRMKQLFTSGRQSIYAGFDPTADSLHVGNLLVIMGLI 83

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFI------- 114
             Q+ GH+PI+L+GG T +IGDPS R   R  +    I+ N++ I+              
Sbjct: 84  HCQRAGHRPIALVGGATGLIGDPSGRKTERNQLGETVIETNLKAIEQQLRQVFENHENCL 143

Query: 115 ----KYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLS 170
               K        +++NN  W   ++ ID +  +G  F +  MLS  SV+SR++ E  +S
Sbjct: 144 WDSKKQKFPLAPLIIVNNADWYADLQLIDFVANMGRHFRMGSMLSRSSVQSRMESEDGMS 203

Query: 171 FLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLL 229
           F EF Y I QAYD++ L + ++C  QMGGSDQ GN++ G +L  R++   ++F LT PL+
Sbjct: 204 FTEFTYQIFQAYDWLHLLRRHNCCFQMGGSDQTGNLMTGHELISRVERKREVFGLTLPLV 263

Query: 230 TTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK 289
           TT  G K GK+   A+WL+   TSP+  +Q++  + D++V    K  T +P+ +++++ +
Sbjct: 264 TTEEGDKFGKSAGNAVWLDCNKTSPFALYQFFLRMPDSEVEKLLKLFTFIPLPQVEQLMR 323

Query: 290 LQGKEI--NEAKKIIATEITTMVHGREEAEKAATAAMECFDM---SIHSQHMPTI----- 339
              +E    +A+ ++A ++T +VHG    ++A       +      +   ++P I     
Sbjct: 324 EHTREPEKRKAQTLLAEDVTLLVHGESGLKQAERVTNALYKGNVEGLAQLNLPEIQQTFQ 383

Query: 340 --SISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ-DF 396
             ++       GM +L L +KA    +  +A R + +    +N   + N    +      
Sbjct: 384 GATMVNLLTEPGMSILELAMKAKCFPTETDAVRIINAGGFYVNQKRVQNIAEVLTTGVHI 443

Query: 397 DSTGNIKLSFGKKNHIICH 415
              G   L  GK+N  I  
Sbjct: 444 LRNGISLLRVGKRNFYIVR 462


>gi|224824111|ref|ZP_03697219.1| tyrosyl-tRNA synthetase [Lutiella nitroferrum 2002]
 gi|224603530|gb|EEG09705.1| tyrosyl-tRNA synthetase [Lutiella nitroferrum 2002]
          Length = 406

 Score =  407 bits (1046), Expect = e-111,   Method: Composition-based stats.
 Identities = 94/414 (22%), Positives = 181/414 (43%), Gaps = 23/414 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D L+++  RG    +     +  L     +    G+D TA  LH GH   L  +  LQ  
Sbjct: 13  DALAVIK-RGAEEVLIEAELIAKLKENRPLRVKAGFDPTAPDLHLGHTVVLTKMRQLQDL 71

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+ + L+G  T +IGDPS ++ +R  +  ++IQ N +         +     +    + 
Sbjct: 72  GHRIMFLIGDFTGMIGDPSGKNTTRPPLTPEQIQINAKTYAEQVYKILDPAKTE----IC 127

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
            N  WL  +    +LR + +  +V RML  +    R    Q ++  EF Y ++Q YD V 
Sbjct: 128 FNSKWLGELGAAGMLR-LAAGSTVARMLERDDFHKRFHGNQPIAIHEFMYPLMQGYDSVA 186

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAI 245
           +  +    +++GG+DQ  N++ G  L ++        +  PLL    G  KM K+L   I
Sbjct: 187 MQAD----IELGGTDQKFNLLMGRTLQQQHGQKPQCVIMMPLLEGLDGVNKMSKSLGNYI 242

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIA 303
            + +  +     +    +I D  +  + + ++  P++EI +  +   +G+   + K ++A
Sbjct: 243 GIAEPAS---EIFGKVMSISDTLMWRYYELVSFRPLNEIAQFKQEVAEGRNPRDIKVLLA 299

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
            E+    H  + A  A       F  +     +P ++++ D     M +  ++ +A    
Sbjct: 300 QELVARFHSEQAAIDALADFEARFQKNAIPDDLPEVTVTLD--GAAMAIGNVLKEAQLVA 357

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           ST+EA R ++   +K++   + ++ LQ+     D    + L  GK+      L 
Sbjct: 358 STSEALRMIQQGGVKVDGEKVEDKGLQL-----DRGVTVVLQVGKRKFARVTLA 406


>gi|153872691|ref|ZP_02001508.1| Tyrosyl-tRNA synthetase, class Ib [Beggiatoa sp. PS]
 gi|152070841|gb|EDN68490.1| Tyrosyl-tRNA synthetase, class Ib [Beggiatoa sp. PS]
          Length = 400

 Score =  406 bits (1045), Expect = e-111,   Method: Composition-based stats.
 Identities = 102/404 (25%), Positives = 181/404 (44%), Gaps = 23/404 (5%)

Query: 18  IHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGG 76
           +H+I    EL    + G  +    G+D TA  LH GH   L  L   Q+ GH  + L+G 
Sbjct: 14  VHEILLEEELRTKLASGKPLRIKAGFDPTAPDLHLGHTVLLNKLRQFQQLGHTILFLIGD 73

Query: 77  GTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIK 136
            T +IGDP+ ++ +R+ + S+E+QEN    +      +          +  N  W+  + 
Sbjct: 74  FTGMIGDPTGKNVTRQSLSSEEVQENARTYQEQIYKILDPD----ITQICFNSEWMNKMD 129

Query: 137 YIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQ 196
              L++      +V RML  +    R   EQ ++  EF Y ++Q YD V L  +    ++
Sbjct: 130 ASGLIKLAAQH-TVARMLERDDFHKRYNGEQPIAIHEFLYPLIQGYDSVALQAD----VE 184

Query: 197 MGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPY 255
           +GG+DQ  N++ G +L +         LT P+L    G  KM K+L   I +++      
Sbjct: 185 LGGTDQKFNLLVGRELQKHYGQTPQVVLTMPILEGLDGVQKMSKSLGNYIGIDEPAD--- 241

Query: 256 NFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIATEITTMVHGR 313
             +    ++ D  +  + + L+    +EI+   KL  +G    + K   A EI    H +
Sbjct: 242 EMFGKLMSVSDILMWRYIELLSFKTPAEIENWKKLVEEGANPRDIKVEFAQEIVARFHSQ 301

Query: 314 EEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLK 373
           + A +A    +  F      + MP ++++ +  +  + +  L+ +AG   ST+EA R +K
Sbjct: 302 QAAIQAYEQFVARFKRHEMPEDMPEMTLTIE--TEEIPIANLLKQAGLTPSTSEAIRMIK 359

Query: 374 SNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            NA+KI+   I++  L+I       T       GK+      + 
Sbjct: 360 QNAVKIDGEKITDRDLKIP-----QTSTHIYQVGKRRFARVTVS 398


>gi|16768608|gb|AAL28523.1| GM10508p [Drosophila melanogaster]
          Length = 442

 Score =  406 bits (1045), Expect = e-111,   Method: Composition-based stats.
 Identities = 130/441 (29%), Positives = 222/441 (50%), Gaps = 33/441 (7%)

Query: 5   KSDFLSILSERGFIHQISNPRE---LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
           + + L  L++RGF H I        +  L ++G  + Y G+D TA SLH G+L  +M L 
Sbjct: 3   QKNLLE-LTDRGFFHGIFPDTAAPRMKQLFTRGQQSIYAGFDPTADSLHVGNLLVIMGLI 61

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFI------- 114
             Q+ GH+PI+L+GG T +IGDPS R   R  +    I+ N++ I+              
Sbjct: 62  HCQRAGHRPIALVGGATGLIGDPSGRKTERNQLGETVIETNLKAIEQQLRRVFENHENCL 121

Query: 115 ----KYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLS 170
               K        +++NN  W   ++ ID +  +G  F +  MLS  SV+SRL+ E  +S
Sbjct: 122 WDSKKQKLPLAPLIIVNNADWYADLQLIDFVANMGRHFRMGSMLSRSSVQSRLESEDGMS 181

Query: 171 FLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLL 229
           F EF Y I QAYD++ L + ++C  QMGGSDQ GN++ G +L  R++   ++F LT PL+
Sbjct: 182 FTEFTYQIFQAYDWLHLLRRHNCCFQMGGSDQTGNLMTGHELISRVERKREVFGLTLPLV 241

Query: 230 TTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK 289
           TT  G K GK+   A+WL+   TSP+  +Q++  + D++V    K  T +P+ +++++ +
Sbjct: 242 TTEEGDKFGKSAGNAVWLDGNKTSPFALYQFFLRMPDSEVEKLLKLFTFIPLPQVEQLMR 301

Query: 290 LQGKEI--NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDE-- 345
              KE    +A+ ++A ++T +VHG    ++A       +  ++  + +  +++S+ +  
Sbjct: 302 EHTKEPEKRKAQTLLAEDVTLLVHGESGLKQAERVTNALYKGNV--EGLAELNLSEIQQT 359

Query: 346 ----------VSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ- 394
                        GM +L L +KA    +  +A R + +    +N   + N    +    
Sbjct: 360 FQGATMVNLLTEPGMSILELAMKAKCFPTETDAVRIINAGGFYVNQKRVQNIAEVLTTGV 419

Query: 395 DFDSTGNIKLSFGKKNHIICH 415
                G   L  GK+N  I  
Sbjct: 420 HILRNGISLLRVGKRNFYIVR 440


>gi|194756246|ref|XP_001960390.1| GF11543 [Drosophila ananassae]
 gi|190621688|gb|EDV37212.1| GF11543 [Drosophila ananassae]
          Length = 464

 Score =  406 bits (1045), Expect = e-111,   Method: Composition-based stats.
 Identities = 130/439 (29%), Positives = 212/439 (48%), Gaps = 29/439 (6%)

Query: 5   KSDFLSILSERGFIHQISNPRE---LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
           + + L  L++RGF   I        +  L + GV + Y G+D TA SLH G+L  +M L 
Sbjct: 25  QRNLLE-LTDRGFFQGIFPDTAAPRMKQLFTSGVQSIYAGFDPTADSLHVGNLLVIMGLI 83

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFI------- 114
             Q+ GH+PI+L+GG T +IGDPS R   R  +    I+ N++ I+              
Sbjct: 84  HCQRAGHQPIALVGGATGLIGDPSGRKTERNQLGESVIETNLKAIEQQLRQVFENHEQFL 143

Query: 115 ----KYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLS 170
               K  +      ++NN  W  +++ ID +  +G  F +  MLS  SV+SRL  E  +S
Sbjct: 144 WDTRKNPSPLPPLTIVNNADWYKNLQIIDFVANMGRHFRMGSMLSRSSVQSRLDSEDGMS 203

Query: 171 FLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLL 229
           F EF Y I QAYD++ L + ++C  QMGGSDQ GN++ G +L  R++   ++F LT PL+
Sbjct: 204 FTEFTYQIFQAYDWLHLLRRHNCCFQMGGSDQTGNLMTGHELISRVERKREVFGLTLPLV 263

Query: 230 TTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK 289
           T   G K GK+   A+WL+   TSP+  +Q++  + D+ V    +  T +P+ EI+++ +
Sbjct: 264 TNEEGDKFGKSAGNAVWLDANKTSPFALYQFFLRMADSKVEKLLRLFTFIPLPEIEQLMR 323

Query: 290 LQGKEI--NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSI----------HSQHMP 337
              KE    +A+ ++A ++T +VHG     +A       +  ++            Q   
Sbjct: 324 EHTKEPEKRKAQTLLAEDVTLLVHGESGLRQAERVTNALYKGNVEGLAELNYAEIKQTFQ 383

Query: 338 TISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ-DF 396
             ++       GM +L L + A    +  +A R + +    +N   + N    I      
Sbjct: 384 GATVVDLLTEPGMSVLQLAMNAKCFPTETDAVRIINAGGFYVNQKRVQNIAEVITAGIHI 443

Query: 397 DSTGNIKLSFGKKNHIICH 415
              G   L  GK+N  I  
Sbjct: 444 LRNGVSLLRVGKRNFYIVR 462


>gi|119899046|ref|YP_934259.1| tyrosyl-tRNA synthetase [Azoarcus sp. BH72]
 gi|119671459|emb|CAL95372.1| TyrS protein [Azoarcus sp. BH72]
          Length = 399

 Score =  406 bits (1045), Expect = e-111,   Method: Composition-based stats.
 Identities = 96/419 (22%), Positives = 183/419 (43%), Gaps = 24/419 (5%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M   ++     L +RG    +     ++ L S   +    G+D TA  LH GH   +  L
Sbjct: 1   MTDVQAAI--ELIKRGADELLIEAELVEKLKSGRPLRIKAGFDPTAPDLHLGHTVLINKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+ + L+G  T +IGDPS ++ +R  +  ++I EN +  +      +     +
Sbjct: 59  RHFQELGHQVLFLIGDFTGMIGDPSGKNATRPPLSREQILENAKTYQDQVFKILDPAKTE 118

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N  W+  +    ++R + +  +V RML  +    R    QS++  EF Y + Q
Sbjct: 119 ----ICFNSAWMEGLGSAGMIR-LAAQQTVARMLERDDFSKRYANNQSIAIHEFLYPLCQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGK 239
            YD V +  +    +++GG+DQ  N++ G +L +         L  PLL    G  KM K
Sbjct: 174 GYDSVAMKAD----VELGGTDQRFNLLMGRELQKHYGQAPQCVLMMPLLEGLDGVNKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINE 297
           +L   I + +   +P   +    ++ D  +  +   L+    +EI   R     G+   +
Sbjct: 230 SLGNYIGIAE---APKEIFGKTMSVSDQLMWRYYDLLSFRSTAEIARLRSEVEGGRNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A E+    HG+  A++A       F  +     +P + +S    + G+ +  ++ 
Sbjct: 287 VKVMLALELVARFHGQLAADEALADFEARFQRNAIPDDLPEVRVSVG--AEGLPVFQVVK 344

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +AG   +T+EA R +   A+++N   + ++ L +   D      + L  GK+      L
Sbjct: 345 QAGLTGTTSEAIRMIDQGAVRLNGDRVEDKGLVLAAGD-----TVVLQVGKRKFAAVVL 398


>gi|307257546|ref|ZP_07539309.1| Tyrosyl-tRNA synthetase 2 [Actinobacillus pleuropneumoniae serovar
           10 str. D13039]
 gi|306863947|gb|EFM95867.1| Tyrosyl-tRNA synthetase 2 [Actinobacillus pleuropneumoniae serovar
           10 str. D13039]
          Length = 396

 Score =  406 bits (1044), Expect = e-111,   Method: Composition-based stats.
 Identities = 102/411 (24%), Positives = 179/411 (43%), Gaps = 27/411 (6%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L+ L  RG  +  S    ++ L     +   +G D TA  +H GH   L  L   Q+ GH
Sbjct: 9   LAELK-RGVENIYSEEDLIEKLKENRPLRIKLGADPTAPDIHLGHTVVLNKLRQFQQLGH 67

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           + I L+G  T ++GDPS ++ +R  +  +++  N E  K      +          ++ N
Sbjct: 68  EVIFLIGDFTGMVGDPSGKNSTRPPLTREDVLRNAETYKQQLFKILD----PNKTRVVFN 123

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL  +    ++R + S ++V RML  +  + R    QS++  EF Y +LQ +D V L 
Sbjct: 124 SEWLGKLGTEGMIR-LASNYTVARMLERDDFKKRFTNNQSIAIHEFIYPLLQGHDSVAL- 181

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWL 247
              +  +++GG+DQ  N++ G +L +        A+T PLL    G  KM K+L   I +
Sbjct: 182 ---EADVELGGTDQTFNLLVGRELQKSAGQKPQVAMTLPLLVGLDGEKKMSKSLGNYIGV 238

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATE 305
                +P + +    +I D  +  +   L+  P+ EI ++     +GK   + K ++A E
Sbjct: 239 T---DAPSDMFGKVMSISDELMWDWYNLLSFRPLDEIAQLKANVAEGKNPRDVKILLAKE 295

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           +    H +  A+ A    +  F        MP  +         +GL TL+ +AG   ST
Sbjct: 296 LIARFHDQAAADSAEQEFINRFQKGAIPDEMPEFT-----FEGEIGLATLLKEAGLVAST 350

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +EA R  +   +KI+   + + +           G      GK+      +
Sbjct: 351 SEAIRSAQQGGVKIDGEKVEDVRQN------AQQGTFVYQVGKRKFARVTV 395


>gi|20130383|ref|NP_611967.1| CG16912 [Drosophila melanogaster]
 gi|50401704|sp|Q9W107|SYYM_DROME RecName: Full=Probable tyrosyl-tRNA synthetase, mitochondrial;
           AltName: Full=Tyrosine--tRNA ligase; Short=TyrRS; Flags:
           Precursor
 gi|7291852|gb|AAF47271.1| CG16912 [Drosophila melanogaster]
 gi|157816396|gb|ABV82192.1| FI02013p [Drosophila melanogaster]
          Length = 464

 Score =  406 bits (1044), Expect = e-111,   Method: Composition-based stats.
 Identities = 130/441 (29%), Positives = 222/441 (50%), Gaps = 33/441 (7%)

Query: 5   KSDFLSILSERGFIHQISNPRE---LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
           + + L  L++RGF H I        +  L ++G  + Y G+D TA SLH G+L  +M L 
Sbjct: 25  QKNLLE-LTDRGFFHGIFPDTAAPRMKQLFTRGQQSIYAGFDPTADSLHVGNLLVIMGLI 83

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFI------- 114
             Q+ GH+PI+L+GG T +IGDPS R   R  +    I+ N++ I+              
Sbjct: 84  HCQRAGHRPIALVGGATGLIGDPSGRKTERNQLGETVIETNLKAIEQQLRRVFENHENCL 143

Query: 115 ----KYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLS 170
               K        +++NN  W   ++ ID +  +G  F +  MLS  SV+SRL+ E  +S
Sbjct: 144 WDSKKQKLPLAPLIIVNNADWYADLQLIDFVANMGRHFRMGSMLSRSSVQSRLESEDGMS 203

Query: 171 FLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLL 229
           F EF Y I QAYD++ L + ++C  QMGGSDQ GN++ G +L  R++   ++F LT PL+
Sbjct: 204 FTEFTYQIFQAYDWLHLLRRHNCCFQMGGSDQTGNLMTGHELISRVERKREVFGLTLPLV 263

Query: 230 TTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK 289
           TT  G K GK+   A+WL+   TSP+  +Q++  + D++V    K  T +P+ +++++ +
Sbjct: 264 TTEEGDKFGKSAGNAVWLDGNKTSPFALYQFFLRMPDSEVEKLLKLFTFIPLPQVEQLMR 323

Query: 290 LQGKEI--NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDE-- 345
              KE    +A+ ++A ++T +VHG    ++A       +  ++  + +  +++S+ +  
Sbjct: 324 EHTKEPEKRKAQTLLAEDVTLLVHGESGLKQAERVTNALYKGNV--EGLAELNLSEIQQT 381

Query: 346 ----------VSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ- 394
                        GM +L L +KA    +  +A R + +    +N   + N    +    
Sbjct: 382 FQGATMVNLLTEPGMSILELAMKAKCFPTETDAVRIINAGGFYVNQKRVQNIAEVLTTGV 441

Query: 395 DFDSTGNIKLSFGKKNHIICH 415
                G   L  GK+N  I  
Sbjct: 442 HILRNGISLLRVGKRNFYIVR 462


>gi|207742346|ref|YP_002258738.1| tyrosyl-trna synthetase protein [Ralstonia solanacearum IPO1609]
 gi|206593736|emb|CAQ60663.1| tyrosyl-trna synthetase protein [Ralstonia solanacearum IPO1609]
          Length = 433

 Score =  406 bits (1044), Expect = e-111,   Method: Composition-based stats.
 Identities = 103/414 (24%), Positives = 186/414 (44%), Gaps = 30/414 (7%)

Query: 11  ILSERG----FIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
            +++RG     I      +      +   +   +G D TA  +H GH   L  +  LQ  
Sbjct: 43  EITQRGCDELLIAAEWEQKLARSAATGVPLRIKLGLDPTAPDIHIGHTVVLNKMRQLQDL 102

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+ I L+G  TS IGDPS R+ +R  +  ++I+ N +      S  +     +    + 
Sbjct: 103 GHQVIFLIGDFTSTIGDPSGRNATRPPLTREQIEANAQTYYRQASMVLDPSKTE----IR 158

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
            N  W   +    ++ ++ + ++V RM+  +    R K    +S  EF Y ++Q YD V 
Sbjct: 159 YNSEWSDPLGARGMI-QLAARYTVARMMERDDFTKRYKAGVPISVHEFLYPLMQGYDSVA 217

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAI 245
           L  +    L++GG+DQ  N++ G +L +         LT PLL    G  KM K+    +
Sbjct: 218 LKSD----LELGGTDQKFNLLVGRELQKEYGQEPQCILTMPLLVGLDGVEKMSKSKGNYV 273

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKKIIA 303
            + +    P   +    +I D  + ++   L+  PM+EI+RM +    G+   + K ++A
Sbjct: 274 GIAE---VPGEMFGKLMSISDDLMWTYFTLLSFRPMAEIERMKQEVALGRNPRDCKVLLA 330

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
            EI    H + +AE+A                +P I +S       +G+  L+ +AG   
Sbjct: 331 QEIIARFHSQADAERALEDF-NHRARGGVPDDIPQIELS----GAPLGIAQLLKQAGLCP 385

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           ST+EA R+++   +KI+ ++IS++ L+++       G   +  GK+      L 
Sbjct: 386 STSEANRNIEQGGVKIDGTVISDKGLKVEA------GTFVMQVGKRRFARVVLS 433


>gi|309973283|gb|ADO96484.1| Tyrosyl-tRNA synthetase [Haemophilus influenzae R2846]
          Length = 395

 Score =  406 bits (1043), Expect = e-111,   Method: Composition-based stats.
 Identities = 110/419 (26%), Positives = 182/419 (43%), Gaps = 28/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M    +  L+ L  RG    +S    ++ L     +   +G D TA  +H GH   L  L
Sbjct: 1   MTDINT-VLAELK-RGTDEILSEADLIEKLKENRPLKVKLGADPTAPDIHLGHTVVLNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+   L+G  T ++GDPS ++ +R  +  +++  N E  K      +     K
Sbjct: 59  RQFQQLGHEVYFLIGDFTGMVGDPSGKNATRPPLSREDVLRNAETYKEQIYKILDPQKTK 118

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               ++ N  WL  +    ++R + S ++V RML  +  + R    Q ++  EF Y +LQ
Sbjct: 119 ----IVFNSEWLSKLGTEGMIR-LASNYTVARMLERDDFKKRFGNNQPIAIHEFIYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGK 239
            YD V L  +    +++GG+DQ  N++ G +L +        A+T PLL    G  KM K
Sbjct: 174 GYDSVALDAD----VELGGTDQKFNLLVGRELQKSAGKKPQVAITLPLLVGLDGEKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINE 297
           +L   I + +   +P + +    +I D  +  +   L+  P+SEI   +     GK   +
Sbjct: 230 SLGNYIGVTE---APSDMFGKVMSISDELMWDWYNLLSFRPLSEIAQLKSEVENGKNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A E+    H  E A  A    +  F        MP  + S +     +GL TL+ 
Sbjct: 287 VKILLAKELIARFHNEEAANVAEQEFINRFQKGAMPDEMPEFTFSGE-----IGLATLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +AG   ST+EA R  +   +KIN   + N K      D    G      GK+      +
Sbjct: 342 EAGLVPSTSEAIRSAQQGGVKINGEKVDNVK------DNAPKGTNVYQVGKRKFARVTV 394


>gi|46143699|ref|ZP_00134668.2| COG0162: Tyrosyl-tRNA synthetase [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|126208940|ref|YP_001054165.1| tyrosyl-tRNA synthetase [Actinobacillus pleuropneumoniae L20]
 gi|126097732|gb|ABN74560.1| tyrosyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 5b
           str. L20]
          Length = 396

 Score =  406 bits (1043), Expect = e-111,   Method: Composition-based stats.
 Identities = 102/411 (24%), Positives = 179/411 (43%), Gaps = 27/411 (6%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L+ L  RG  +  S    ++ L     +   +G D TA  +H GH   L  L   Q+ GH
Sbjct: 9   LAELK-RGVENIYSEEDLIEKLKENRPLRIKLGADPTAPDIHLGHTVVLNKLRQFQQLGH 67

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           + I L+G  T ++GDPS ++ +R  +  +++  N E  K      +          ++ N
Sbjct: 68  EVIFLIGDFTGMVGDPSGKNSTRPPLTREDVLRNAETYKQQLFKILD----PNKTRVVFN 123

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL  +    ++R + S ++V RML  +  + R    QS++  EF Y +LQ +D V L 
Sbjct: 124 SEWLGKLGTEGMIR-LASNYTVARMLERDDFKKRFTNNQSIAIHEFIYPLLQGHDSVAL- 181

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWL 247
              +  +++GG+DQ  N++ G +L +        A+T PLL    G  KM K+L   I +
Sbjct: 182 ---EADVELGGTDQTFNLLVGRELQKSAGQKPQVAMTLPLLVGLDGEKKMSKSLGNYIGV 238

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATE 305
                +P + +    +I D  +  +   L+  P+ EI ++     +GK   + K ++A E
Sbjct: 239 T---DAPSDMFGKVMSISDELMWDWYNLLSFRPLDEIAQLKADVAEGKNPRDVKILLAKE 295

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           +    H +  A+ A    +  F        MP  +         +GL TL+ +AG   ST
Sbjct: 296 LIARFHDQAAADSAEQEFINRFQKGAIPDEMPEFT-----FEGEIGLATLLKEAGLVAST 350

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +EA R  +   +KI+   + + +           G      GK+      +
Sbjct: 351 SEAIRSAQQGGVKIDGEKVEDVRQN------AQQGTFVYQVGKRKFARVTV 395


>gi|73540182|ref|YP_294702.1| tyrosyl-tRNA synthetase [Ralstonia eutropha JMP134]
 gi|115305821|sp|Q475S5|SYY_RALEJ RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|72117595|gb|AAZ59858.1| tyrosyl-tRNA synthetase [Ralstonia eutropha JMP134]
          Length = 413

 Score =  406 bits (1043), Expect = e-111,   Method: Composition-based stats.
 Identities = 101/414 (24%), Positives = 182/414 (43%), Gaps = 30/414 (7%)

Query: 11  ILSERGFIHQISNPRELDILCSQG----VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
            +S+RG    +     L  L         +   +G D TA  +H GH   L  L  LQ  
Sbjct: 23  EVSKRGCDELLIEAEWLQKLARSEATGVPLRIKLGLDPTAPDIHIGHTVVLNKLRQLQDL 82

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+ I L+G  TS IGDPS R+ +R  +  ++I+ N +      S  +     +    + 
Sbjct: 83  GHQVIFLIGDFTSTIGDPSGRNSTRPPLTREQIEANAQTYYRQASLVLDPARTE----IR 138

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
            N  W   +    ++ ++ + ++V RM+  +    R +    +S  EF Y ++Q YD V 
Sbjct: 139 YNSEWCDPLGARGMI-QLAAKYTVARMMERDDFTKRFRSGIPISVHEFLYPLMQGYDSVA 197

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAI 245
           L  +    L++GG+DQ  N++ G +L +         LT PLL    G  KM K+    +
Sbjct: 198 LKSD----LELGGTDQKFNLLVGRELQKEYGQEPQCILTMPLLVGLDGVEKMSKSKGNYV 253

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIA 303
            + +   +P   +    +I D  +  +   L+  P++EID  +     G+   + K ++A
Sbjct: 254 GVTE---APNEMFGKLMSISDDLMWQYFTLLSFRPLAEIDLMKQEIAAGRNPRDCKVLLA 310

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
            EI    H + +AEKA                +P +S+S       +G+  L+ +A    
Sbjct: 311 QEIVARFHSQADAEKALEDF-NHRARGGVPDDIPAVSLS----GAPLGIAQLLKQANLVP 365

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           ST+EA R+++   +KI+ + +S++ +++        G   +  GK+      L 
Sbjct: 366 STSEANRNIEQGGVKIDGATVSDKAVKVAA------GTYVVQVGKRRFARVTLA 413


>gi|303252484|ref|ZP_07338648.1| tyrosyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2
           str. 4226]
 gi|307246392|ref|ZP_07528468.1| Tyrosyl-tRNA synthetase 2 [Actinobacillus pleuropneumoniae serovar
           1 str. 4074]
 gi|307248519|ref|ZP_07530537.1| Tyrosyl-tRNA synthetase 2 [Actinobacillus pleuropneumoniae serovar
           2 str. S1536]
 gi|307250750|ref|ZP_07532683.1| Tyrosyl-tRNA synthetase 2 [Actinobacillus pleuropneumoniae serovar
           4 str. M62]
 gi|307255377|ref|ZP_07537187.1| Tyrosyl-tRNA synthetase 2 [Actinobacillus pleuropneumoniae serovar
           9 str. CVJ13261]
 gi|307259827|ref|ZP_07541545.1| Tyrosyl-tRNA synthetase 2 [Actinobacillus pleuropneumoniae serovar
           11 str. 56153]
 gi|307261956|ref|ZP_07543614.1| Tyrosyl-tRNA synthetase 2 [Actinobacillus pleuropneumoniae serovar
           12 str. 1096]
 gi|302648685|gb|EFL78877.1| tyrosyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2
           str. 4226]
 gi|306852725|gb|EFM84954.1| Tyrosyl-tRNA synthetase 2 [Actinobacillus pleuropneumoniae serovar
           1 str. 4074]
 gi|306854995|gb|EFM87180.1| Tyrosyl-tRNA synthetase 2 [Actinobacillus pleuropneumoniae serovar
           2 str. S1536]
 gi|306857218|gb|EFM89341.1| Tyrosyl-tRNA synthetase 2 [Actinobacillus pleuropneumoniae serovar
           4 str. M62]
 gi|306861686|gb|EFM93670.1| Tyrosyl-tRNA synthetase 2 [Actinobacillus pleuropneumoniae serovar
           9 str. CVJ13261]
 gi|306866125|gb|EFM97995.1| Tyrosyl-tRNA synthetase 2 [Actinobacillus pleuropneumoniae serovar
           11 str. 56153]
 gi|306868367|gb|EFN00186.1| Tyrosyl-tRNA synthetase 2 [Actinobacillus pleuropneumoniae serovar
           12 str. 1096]
          Length = 396

 Score =  406 bits (1043), Expect = e-111,   Method: Composition-based stats.
 Identities = 103/411 (25%), Positives = 179/411 (43%), Gaps = 27/411 (6%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L+ L  RG  +  S    ++ L     +   +G D TA  +H GH   L  L   Q+ GH
Sbjct: 9   LAELK-RGVENIYSEEDLIEKLKENRPLRIKLGADPTAPDIHLGHTVVLNKLRQFQQLGH 67

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           + I L+G  T ++GDPS ++ +R  +  +++  N E  K      +          ++ N
Sbjct: 68  EVIFLIGDFTGMVGDPSGKNSTRPPLTREDVLRNAETYKQQLFKILD----PNKTRVVFN 123

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL  +    ++R + S ++V RML  +  + R    QS++  EF Y +LQ +D V L 
Sbjct: 124 SEWLGKLGTEGMIR-LASNYTVARMLERDDFKKRFTNNQSIAIHEFIYPLLQGHDSVAL- 181

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWL 247
              +  +++GG+DQ  N++ G +L +        A+T PLL    G  KM K+L   I +
Sbjct: 182 ---EADVELGGTDQTFNLLVGRELQKSAGQKPQVAMTLPLLVGLDGEKKMSKSLGNYIGV 238

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATE 305
                +P + +    +I D  +  +   L+  P+ EI ++     +GK   + K ++A E
Sbjct: 239 T---DAPSDMFGKVMSISDELMWDWYNLLSFRPLDEIAQLKANVAEGKNPRDVKILLAKE 295

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           +    H +  A+ A    +  F        MP  +         +GL TL+ +AG   ST
Sbjct: 296 LIARFHDQAAADSAEQEFINRFQKGAIPDEMPEFT-----FEGEIGLATLLKEAGLVAST 350

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +EA R  +   +KI+   I + +           G      GK+      +
Sbjct: 351 SEAIRSAQQGGVKIDGEKIEDVRQN------AQQGTFVYQVGKRKFARVTV 395


>gi|260582183|ref|ZP_05849977.1| tyrosyl-tRNA synthetase [Haemophilus influenzae NT127]
 gi|260094815|gb|EEW78709.1| tyrosyl-tRNA synthetase [Haemophilus influenzae NT127]
          Length = 395

 Score =  406 bits (1043), Expect = e-111,   Method: Composition-based stats.
 Identities = 110/419 (26%), Positives = 184/419 (43%), Gaps = 28/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M    +  L+ L  RG    +S    ++ L     +   +G D TA  +H GH   L  L
Sbjct: 1   MTDINT-VLAELK-RGTDEILSEADLIEKLKENRPLKVKLGADPTAPDIHLGHTVVLNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+   L+G  T ++GDPS ++ +R  +  +++  N E  K      +     K
Sbjct: 59  RQFQQLGHEVYFLIGDFTGMVGDPSGKNATRPPLSREDVLRNAETYKEQIYKILDPQKTK 118

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               ++ N  WL  +    ++R + S ++V RML  +  + R    Q ++  EF Y +LQ
Sbjct: 119 ----IVFNSEWLSKLGTEGMIR-LASNYTVARMLERDDFKKRFGNNQPIAIHEFIYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGK 239
            YD V L  +    +++GG+DQ  N++ G +L +        A+T PLL    G  KM K
Sbjct: 174 GYDSVALDAD----VELGGTDQKFNLLVGRELQKSAGKKPQVAITLPLLVGLDGEKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINE 297
           +L   I + +   +P + +    +I D  + ++   L+  P++EI   +    +GK   +
Sbjct: 230 SLGNYIGVTE---APSDMFGKVMSISDELMWNWYNLLSFRPLNEIAQLKSEVEKGKNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A E+    H  E A  A    +  F        MP  + S +     MGL TL+ 
Sbjct: 287 VKILLAKELIARFHNEETANAAEQEFINRFQKGAMPDEMPEFTFSGE-----MGLATLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +AG   ST+EA R  +   +KIN   + N K      D    G      GK+      +
Sbjct: 342 EAGLVPSTSEAIRSAQQGGVKINGEKVDNVK------DNAPKGTNVYQVGKRKFARVTV 394


>gi|165976904|ref|YP_001652497.1| tyrosyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 3
           str. JL03]
 gi|165877005|gb|ABY70053.1| tyrosyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 3
           str. JL03]
          Length = 396

 Score =  406 bits (1043), Expect = e-111,   Method: Composition-based stats.
 Identities = 102/411 (24%), Positives = 179/411 (43%), Gaps = 27/411 (6%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L+ L  RG  +  S    ++ L     +   +G D TA  +H GH   L  L   Q+ GH
Sbjct: 9   LAELK-RGVENIYSEEDLIEKLKENRPLRIKLGADPTAPDIHLGHTVVLNKLRQFQQLGH 67

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           + I L+G  T ++GDPS ++ +R  +  +++  N E  K      +          ++ N
Sbjct: 68  EVIFLIGDFTGMVGDPSGKNSTRPPLTREDVLRNAETYKQQLFKILD----PNKTRVVFN 123

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL  +    ++R + S ++V RML  +  + R    QS++  EF Y +LQ +D V L 
Sbjct: 124 SEWLGKLGTEGMIR-LASNYTVARMLERDDFKKRFTNNQSIAIHEFIYPLLQGHDSVAL- 181

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWL 247
              +  +++GG+DQ  N++ G +L +        A+T PLL    G  KM K+L   I +
Sbjct: 182 ---EADVELGGTDQTFNLLVGRELQKSAGQKPQVAMTLPLLVGLDGEKKMSKSLGNYIGV 238

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATE 305
                +P + +    +I D  +  +   L+  P+ EI ++     +GK   + K ++A E
Sbjct: 239 T---DAPSDMFGKVMSISDELMWDWYNLLSFRPLDEIAQLKANVAEGKNPRDVKILLAKE 295

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           +    H +  A+ A    +  F        MP  +         +GL TL+ +AG   ST
Sbjct: 296 LIARFHDQAAADSAEQEFINRFQKGAIPDEMPEFT-----FEGKIGLATLLKEAGLVAST 350

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +EA R  +   +KI+   + + +           G      GK+      +
Sbjct: 351 SEAIRSAQQGGVKIDGEKVEDVRQN------AQQGTFVYQVGKRKFARVTV 395


>gi|114319599|ref|YP_741282.1| tyrosyl-tRNA synthetase [Alkalilimnicola ehrlichii MLHE-1]
 gi|114225993|gb|ABI55792.1| tyrosyl-tRNA synthetase [Alkalilimnicola ehrlichii MLHE-1]
          Length = 399

 Score =  406 bits (1043), Expect = e-111,   Method: Composition-based stats.
 Identities = 102/409 (24%), Positives = 174/409 (42%), Gaps = 22/409 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG    +      D L     +    G+D TA  LH GH   +  L   Q  GH+  
Sbjct: 10  LLRRGAEEILLENELRDKLQYDRPLRVKAGFDPTAPDLHLGHTVLINKLRQFQDLGHEVY 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T +IGDPS +  +R  +  +E+++N    +      +          ++ N  W
Sbjct: 70  FLIGDFTGMIGDPSGKSATRPPLTREEVRDNARTYEEQIFQVLD----PERTQVVFNSDW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +      D++R + S  +V RML  +    R    Q ++  EF Y ++Q YD V L  + 
Sbjct: 126 MNDFSAADMIR-LASHHTVARMLERDDFHKRYAARQPIAIHEFLYPLVQGYDSVALKAD- 183

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G +L +         LT PLL    G  KM K+L   + +   
Sbjct: 184 ---VELGGTDQKFNLLVGRELQKAYGQSPQTVLTMPLLEGLDGVQKMSKSLGNYVGI--- 237

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATEITT 308
                  +    +I D  +  +   L+  P SEI+R+ +   +G+   + K  +A EI T
Sbjct: 238 KEPAEEMFGKLMSISDDLMWRYFLLLSFRPESEIERLRRDVAEGRNPRDVKFELAEEIVT 297

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
             H    A +A    +  F      + MP  ++  D+   G+ L  L+  AG   ST++A
Sbjct: 298 RFHDARAAARAREVFIARFRKGAMPEEMPEHTLPADD--GGLALDRLLKGAGLVASTSDA 355

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           RR LK  A++I+   + +++L +               GK+      + 
Sbjct: 356 RRMLKQGAVRIDGERVEDQRLVVPA-----GETHVYQVGKRRFARVTVA 399


>gi|187479433|ref|YP_787458.1| tyrosyl-tRNA synthetase [Bordetella avium 197N]
 gi|114154816|sp|Q2KV13|SYY_BORA1 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|115424020|emb|CAJ50573.1| tyrosyl-tRNA synthetase [Bordetella avium 197N]
          Length = 409

 Score =  406 bits (1043), Expect = e-111,   Method: Composition-based stats.
 Identities = 98/386 (25%), Positives = 175/386 (45%), Gaps = 25/386 (6%)

Query: 35  VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMM 94
            +   +G D TA  +H GH   L  +  LQ  GH  I L+G  TS IGDPS R+ +R  +
Sbjct: 45  PLRIKLGLDPTAPDIHLGHTVVLNKMRQLQDLGHTVIFLIGDFTSTIGDPSGRNSTRPPL 104

Query: 95  RSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRML 154
             ++I+ N +      S  +     +    +  N  W   +    ++ ++ S ++V RM+
Sbjct: 105 TREQIEHNAKTYYAQASLVLDPARTE----IRYNSEWCDPLGARGMI-QLASRYTVARMM 159

Query: 155 SFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
             E    R K    ++  EF Y ++Q YD V L  +    L++GG+DQ  N++ G +L +
Sbjct: 160 EREDFTRRFKTGVPIAVHEFLYPLMQGYDSVALKAD----LELGGTDQKFNLLVGRELQK 215

Query: 215 RLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFA 273
                    LT PLL    G  KM K+    I +++   SP + +    +I D  +  + 
Sbjct: 216 EYGQEPQCILTMPLLVGTDGVDKMSKSKGNYIGISE---SPDSMFGKLMSISDTLMWRYF 272

Query: 274 KRLTTLPMSEIDRMAKL--QGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSI 331
           + L+   + +I  +      G+   +AK  +A EI T  H  ++AE+A       F    
Sbjct: 273 ELLSFRSLEDIAALKAEIDAGRNPRDAKVALAQEIITRFHSAKDAEQALANFEARFRDGA 332

Query: 332 HSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
               +P ++++       MG+L ++  +    S++EA+R ++   +KI+ + I +  LQ+
Sbjct: 333 IPDDIPEVNLA----GAPMGILHVLRASSLCASSSEAQRAIEQGGVKIDGAKIEDRSLQL 388

Query: 392 KLQDFDSTGNIKLSFGKKNHIICHLC 417
                   G+  L  GK+     +L 
Sbjct: 389 NA------GSYVLQVGKRKFARVNLA 408


>gi|270289145|ref|ZP_06195447.1| tyrosyl-tRNA synthetase [Chlamydia muridarum Weiss]
          Length = 408

 Score =  406 bits (1043), Expect = e-111,   Method: Composition-based stats.
 Identities = 138/415 (33%), Positives = 220/415 (53%), Gaps = 25/415 (6%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            +  L +RG +   S    L+ L +   V+AY+G+D TA SLH GH   +  L  L   G
Sbjct: 4   LIDSLQKRGILDNSS--AGLESLTA--PVSAYLGFDPTAPSLHIGHWIGICFLRRLSAYG 59

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
             PI+L+GG T +IGDPS +   R ++  +++ +N +KI+   ++++       D  ++N
Sbjct: 60  ITPIALVGGATGMIGDPSGKSVERSLLDQEQVLDNSKKIEVALANYL------PDIRIVN 113

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL S+  +D LR+IG +F +  ML+ + V+ R+  E+ +S+ EF+Y++LQ+YDF  L
Sbjct: 114 NADWLGSLSMVDFLRDIGKYFRLGSMLAKDVVKQRVYSEEGISYTEFSYLLLQSYDFAHL 173

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            K++   LQ GGSDQWGNI  GID   R    + F LT PLLT + G K+GKT SG +WL
Sbjct: 174 FKHHGVVLQCGGSDQWGNITSGIDYIRRKGLGQAFGLTYPLLTDSKGKKIGKTESGTVWL 233

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           + E+TSPY  +QY+  + D ++   A+ LT L   E+  + K    +    K+ +A  I 
Sbjct: 234 DPELTSPYELFQYFLRLSDQEIPKIARMLTLLDDDEVLALDKRLENDPQAVKRYVAEVIV 293

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGL------------LTL 355
             VHG E   +A       F      +++    ++   V  G+G+            L +
Sbjct: 294 KDVHGAEGLAQALATTESFFANKG--KNITESELAAL-VQSGVGINVARADVIGKRWLDV 350

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
           +V+ GF +S  EARR ++   + +N   + +E+  +          I LS GKK 
Sbjct: 351 VVQLGFCSSKGEARRLIQQRGLYVNQEPLIDEQSVLDGTYLCFDRYILLSQGKKK 405


>gi|303250978|ref|ZP_07337167.1| tyrosyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|307253125|ref|ZP_07535006.1| Tyrosyl-tRNA synthetase 2 [Actinobacillus pleuropneumoniae serovar
           6 str. Femo]
 gi|302650195|gb|EFL80362.1| tyrosyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|306859419|gb|EFM91451.1| Tyrosyl-tRNA synthetase 2 [Actinobacillus pleuropneumoniae serovar
           6 str. Femo]
          Length = 396

 Score =  406 bits (1043), Expect = e-111,   Method: Composition-based stats.
 Identities = 103/411 (25%), Positives = 179/411 (43%), Gaps = 27/411 (6%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L+ L  RG  +  S    ++ L     +   +G D TA  +H GH   L  L   Q+ GH
Sbjct: 9   LAELK-RGVENIYSEEDLIEKLKENRPLRIKLGADPTAPDIHLGHTVVLNKLRQFQQLGH 67

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           + I L+G  T ++GDPS ++ +R  +  +++  N E  K      +          ++ N
Sbjct: 68  EVIFLIGDFTGMVGDPSGKNSTRPPLTREDVLRNAETYKQQLFKILD----PNKTRVVFN 123

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL  +    ++R + S ++V RML  +  + R    QS++  EF Y +LQ +D V L 
Sbjct: 124 SEWLGKLGTEGMIR-LASNYTVARMLERDDFKKRFTNNQSIAIHEFIYPLLQGHDSVAL- 181

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWL 247
              +  +++GG+DQ  N++ G +L +        A+T PLL    G  KM K+L   I +
Sbjct: 182 ---EADVELGGTDQTFNLLVGRELQKSAGQKPQVAMTLPLLVGLDGEKKMSKSLGNYIGV 238

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATE 305
                +P + +    +I D  +  +   L+  P+ EI ++     +GK   + K ++A E
Sbjct: 239 T---DAPSDMFGKVMSISDELMWDWYNLLSFRPLDEIAQLKADVAEGKNPRDVKILLAKE 295

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           +    H +  A+ A    +  F        MP  +         +GL TL+ +AG   ST
Sbjct: 296 LIARFHDQAAADSAEQEFINRFQKGAIPDEMPEFT-----FEGEIGLATLLKEAGLVAST 350

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +EA R  +   +KI+   I + +           G      GK+      +
Sbjct: 351 SEAIRSAQQGGVKIDGEKIEDVRQN------AQQGTFVYQVGKRKFARVTV 395


>gi|300692496|ref|YP_003753491.1| tyrosyl-tRNA synthetase [Ralstonia solanacearum PSI07]
 gi|299079556|emb|CBJ52234.1| tyrosyl-tRNA synthetase [Ralstonia solanacearum PSI07]
          Length = 423

 Score =  405 bits (1042), Expect = e-111,   Method: Composition-based stats.
 Identities = 102/414 (24%), Positives = 187/414 (45%), Gaps = 30/414 (7%)

Query: 11  ILSERG----FIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
            +++RG     I      +      +   +   +G D TA  +H GH   L  +  LQ  
Sbjct: 33  EITQRGCDELLIAAEWEQKLARSAATGVPLRIKLGLDPTAPDIHIGHTVVLNKMRQLQDL 92

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+ I L+G  TS IGDPS R+ +R  +  ++I+ N +      S  +     +    + 
Sbjct: 93  GHQVIFLIGDFTSTIGDPSGRNATRPPLTREQIEANAQTYYRQASMVLDPSKTE----IR 148

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
            N  W   +    ++ ++ + ++V RM+  +    R K    +S  EF Y ++Q YD V 
Sbjct: 149 YNSEWSDPLGARGMI-QLAAKYTVARMMERDDFTKRFKAGVPISVHEFLYPLMQGYDSVA 207

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAI 245
           L  +    L++GG+DQ  N++ G +L +         LT PLL    G  KM K+    +
Sbjct: 208 LKSD----LELGGTDQKFNLLVGRELQKEYGQEPQCILTMPLLVGLDGVEKMSKSKGNYV 263

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIA 303
            +++   +P   +    +I D  + ++   L+  P++EID M +    G+   + K ++A
Sbjct: 264 GISE---APNEMFGKLMSISDDLMWTYYTLLSFRPLAEIDVMKEEIALGRNPRDCKVLLA 320

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
            EI    H + +AE+A                +P I +S       +G+  L+ +AG   
Sbjct: 321 QEIVARFHSQADAERALEDF-NHRARGGVPDDIPQIELS----GAPIGIAQLLKQAGLCP 375

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           ST+EA R+++   +KI+ ++IS++ L+++       G   +  GK+      L 
Sbjct: 376 STSEANRNIEQGGVKIDGAVISDKGLKVEA------GTFVMQVGKRRFARVVLS 423


>gi|257095538|ref|YP_003169179.1| tyrosyl-tRNA synthetase [Candidatus Accumulibacter phosphatis clade
           IIA str. UW-1]
 gi|257048062|gb|ACV37250.1| tyrosyl-tRNA synthetase [Candidatus Accumulibacter phosphatis clade
           IIA str. UW-1]
          Length = 399

 Score =  405 bits (1042), Expect = e-111,   Method: Composition-based stats.
 Identities = 94/420 (22%), Positives = 179/420 (42%), Gaps = 24/420 (5%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M A + D   I  +RG    +     ++ L S   +    G+D TA  LH GH   +  L
Sbjct: 1   MRAVEEDLKQI--KRGSEELLIEAELVEKLKSGRPLRIKAGFDPTAPDLHLGHTVLINKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GH  + L+G  T +IGDP+ ++ +R  +  ++I++N    +      +     +
Sbjct: 59  RHFQDLGHHVMFLIGDFTGMIGDPTGKNATRPPLSHEQIRDNATTYREQVFKILDPARTE 118

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N +W   +    ++R + +  +V RML  +    R +  Q ++  E  Y + Q
Sbjct: 119 ----VCFNASWFEPLGAAGMIR-LAALHTVARMLERDDFAKRYRGGQPIAIHELLYPLCQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGK 239
            YD V +  +    +++GG+DQ  N++ G +L +         LT PLL    G  KM K
Sbjct: 174 GYDSVAMKAD----VELGGTDQKFNLLVGRELQKHFGQAPQCILTMPLLEGLDGVNKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINE 297
           +L   + +++    P   +    ++ D  +  + + L+      I   R   + G+   E
Sbjct: 230 SLGNYVGIDEP---PGEMFGKLMSVSDELMWRYFELLSFRSSEAIAGFRQDAVDGRNPRE 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A EI    HG + A +A       F        MP +S    +  + + +  ++ 
Sbjct: 287 IKVLLAQEIVGRFHGAQAALQALADFDARFRRGAIPDDMPELSFPATD--QPLTIAQVLK 344

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           ++G   ST+EA R ++   ++I+ + I +  L      F +     L  GK+ +    + 
Sbjct: 345 QSGLTASTSEALRMIEQGGVRIDGTRIDDRNLV-----FSAKACFVLQVGKRKYARVSIA 399


>gi|169847762|ref|XP_001830590.1| tyrosine-tRNA ligase [Coprinopsis cinerea okayama7#130]
 gi|116508326|gb|EAU91221.1| tyrosine-tRNA ligase [Coprinopsis cinerea okayama7#130]
          Length = 498

 Score =  405 bits (1042), Expect = e-111,   Method: Composition-based stats.
 Identities = 136/460 (29%), Positives = 212/460 (46%), Gaps = 57/460 (12%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S  L  ++ RGFI  ++   +L           Y G D TA SLH GHL  L+ L     
Sbjct: 30  SAVLDEVTARGFIQDVTRRADLAKALEAKPQGLYTGIDPTAPSLHIGHLIPLLCLAHFHL 89

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG-------- 117
            GHK I L+G  T  IGDPS R   R++ +++++  NI  +    ++F +          
Sbjct: 90  HGHKIIPLIGSATGRIGDPSGRSTERKLQQTEQLNANIAGLTRSVTNFFERAFVHASRRL 149

Query: 118 ----TGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLE 173
                 + +  +++N  W      +D L+ +G    +N M++ ESVR+RL  +Q +SF E
Sbjct: 150 GLQRDAQPEVKVVSNHVWHEKFSMLDFLQVVGIHARINTMMNRESVRARLSSQQGISFTE 209

Query: 174 FNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK---------------- 217
           F Y +LQAYDF  L +N+ C +Q+GGSDQWGNI+ GI+L  +L                 
Sbjct: 210 FTYQLLQAYDFHYLNQNHGCTIQIGGSDQWGNIVAGIELIGKLSPSSTAQGTGKEATPPT 269

Query: 218 -TPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRL 276
            +P  F +T+PLLTT SG K GK+   A+WL++ +TS ++F+QY+    D+ +  +    
Sbjct: 270 TSPDAFGITTPLLTTPSGEKFGKSAGNAVWLDENLTSVFDFYQYFFKSPDSVLPLYLNLF 329

Query: 277 TTLPMSEIDRMAKLQG--KEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQ 334
           T LP  +I  + +      E+   +K +A E+T MVHG    E+A T     F  SI + 
Sbjct: 330 TFLPRPKIAEIVETHNARPELRLGQKTLAAEVTEMVHGASALERAQTLTSLLFPTSISAS 389

Query: 335 HMPT--------------------------ISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
             P                           + I + E+     ++ L  + G   S +  
Sbjct: 390 ASPDGSAQSDYSGLTTEQITSAFDSSDPRLVYIPEAELVESTPVVKLASRCGLVASNSAG 449

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGK 408
           R  + S  + +NNS + + K  I            L  GK
Sbjct: 450 RSLVASRGLYLNNSPVPDIKTTISKNQLIDGRVAILRAGK 489


>gi|111225605|ref|YP_716399.1| tyrosine tRNA synthetase [Frankia alni ACN14a]
 gi|111153137|emb|CAJ64884.1| tyrosine tRNA synthetase [Frankia alni ACN14a]
          Length = 429

 Score =  405 bits (1042), Expect = e-111,   Method: Composition-based stats.
 Identities = 128/426 (30%), Positives = 215/426 (50%), Gaps = 17/426 (3%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  LS RG IH  ++P EL      G    YIG+D TA SL  G+L  + LL    + G
Sbjct: 5   LLDELSWRGLIHDSTDPAELRDHLDSGGRRCYIGFDPTAPSLTIGNLLPITLLIRAARAG 64

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFI-KYGTGKTDALML 126
              ++L GGGT +IGDPS +   R ++  ++++ N+ + + I  +   +    +     +
Sbjct: 65  LGAVTLFGGGTGLIGDPSGKSAERSLLTVEDVRANVARHREIMETIFGRALAAEEIPAFV 124

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYDFV 185
           +N  WL  +  I+ LR++G  F V  M+  +SVR RL      L++ EF+Y +LQAYDF 
Sbjct: 125 DNGDWLGGLGMIEFLRDVGKHFPVTEMIRRDSVRRRLDDPDVGLTYTEFSYSLLQAYDFR 184

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L +++   LQMG SDQWGNI+ GID   R+   ++  LT PLL  A GTK GK+  GA+
Sbjct: 185 RLCEDHGVTLQMGASDQWGNIVAGIDYVRRVLRTQVHGLTCPLLLRADGTKFGKSEKGAV 244

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIA 303
           WL  + TSPY  +Q+  N+ D +   FA   +      ++R+     +       ++ +A
Sbjct: 245 WLTADRTSPYTLYQFLINLSDDEARRFALFFSLTDREPLERLFAEHAEAPGRRALQRHLA 304

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTIS--ISKDEVSRGMG 351
            E+T ++HG+   + A  A+   F   + +            +PT++  +++     G  
Sbjct: 305 REMTALMHGQPAVDAAEAASAALFSGDVKAIGADLISDVFADVPTVTEPLARLAADGGWP 364

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           ++ L++  G A+S  +AR HL + A+ +N   I + +  +  +D      I +  G++  
Sbjct: 365 VVDLLLATGLASSRRDAREHLGNRAVLVNGDRI-DAEATVTEKDLLHGSVILVRRGRREW 423

Query: 412 IICHLC 417
            +    
Sbjct: 424 RVARFT 429


>gi|255310864|ref|ZP_05353434.1| tyrosyl-tRNA synthetase [Chlamydia trachomatis 6276]
 gi|255317164|ref|ZP_05358410.1| tyrosyl-tRNA synthetase [Chlamydia trachomatis 6276s]
 gi|255348425|ref|ZP_05380432.1| tyrosyl-tRNA synthetase [Chlamydia trachomatis 70]
 gi|255502967|ref|ZP_05381357.1| tyrosyl-tRNA synthetase [Chlamydia trachomatis 70s]
 gi|296435579|gb|ADH17753.1| tyrosyl-tRNA synthetase [Chlamydia trachomatis G/9768]
 gi|296436503|gb|ADH18673.1| tyrosyl-tRNA synthetase [Chlamydia trachomatis G/11222]
 gi|296437439|gb|ADH19600.1| tyrosyl-tRNA synthetase [Chlamydia trachomatis G/11074]
 gi|297139938|gb|ADH96696.1| tyrosyl-tRNA synthetase [Chlamydia trachomatis G/9301]
          Length = 412

 Score =  405 bits (1042), Expect = e-111,   Method: Composition-based stats.
 Identities = 135/419 (32%), Positives = 214/419 (51%), Gaps = 21/419 (5%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            +  L +RG +   S    L+ L     V+AY+G+D TA SLH GH   +  L  L   G
Sbjct: 4   LIDNLKKRGILDNSS--AGLESLTV--PVSAYLGFDPTAPSLHIGHWIGICFLRRLAAYG 59

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
             P++L+GG T +IGDPS +   R ++   ++ +N +KI    +S++          ++N
Sbjct: 60  ITPVALVGGATGMIGDPSGKSVERSLLDQAQVLDNSKKIAATLASYL------PGIRIVN 113

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL S+  +D LR++G  F +  ML+ + V+ R+  E+ +S+ EF+Y++LQ+YDF  L
Sbjct: 114 NADWLGSLSMVDFLRDVGKHFRLGSMLAKDVVKQRVYSEEGISYTEFSYLLLQSYDFAHL 173

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            K ++  LQ GGSDQWGNI  GID   R    + + LT PLLT + G K+GKT SG IWL
Sbjct: 174 FKEHNVVLQCGGSDQWGNITSGIDYIRRRGLGQAYGLTYPLLTDSKGKKIGKTESGTIWL 233

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           +  +T PY  +QY+  + D ++    + LT L   EI  + +    +    KK IA  I 
Sbjct: 234 DPALTPPYELFQYFLRLPDQEISKVMRTLTLLDNEEIFALDERLTSDPQAVKKYIAEVIV 293

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGL----------LTLIV 357
             VHG E   +A  A    F     S     + ++  E   G+ +          L ++V
Sbjct: 294 KDVHGSEGLAQAQAATESFFASKGKSITEAEL-VALVESGVGVKVARADLIGKRWLDIVV 352

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           + GF +S  +ARR ++   + IN   +++E+  +          + LS GK+   +  L
Sbjct: 353 ELGFCSSRGQARRLIQQRGLYINQEPLADEQSILDGTQLCFDRYVLLSQGKRKKQVIDL 411


>gi|189426548|ref|YP_001953725.1| tyrosyl-tRNA synthetase [Geobacter lovleyi SZ]
 gi|189422807|gb|ACD97205.1| tyrosyl-tRNA synthetase [Geobacter lovleyi SZ]
          Length = 401

 Score =  405 bits (1042), Expect = e-111,   Method: Composition-based stats.
 Identities = 100/421 (23%), Positives = 185/421 (43%), Gaps = 24/421 (5%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M    ++ ++++  RG +  +      D L +   +    G+D TA  LH GH   +  L
Sbjct: 1   MSGTVAEQIAVIK-RGCVELLIQKELEDKLATGRPLIIKAGFDPTAPDLHLGHTVLIQKL 59

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH    L+G  T +IGDP+ + E+R+++  +++  N E  K      +     K
Sbjct: 60  RQFQQLGHDVHFLIGDFTGMIGDPTGKSETRKVLTREDVLRNAETYKEQVFKILDPEKTK 119

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               ++ N +WL  +    ++  + S ++V RML  +    R   +Q ++  EF Y ++Q
Sbjct: 120 ----VVFNSSWLNELGCGGMIG-LASKYTVARMLERDDFHKRYSTQQPIAIHEFLYPLIQ 174

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGK 239
            YD V +  +    +++GG+DQ  N++ G +L           LT PLL    G  KM K
Sbjct: 175 GYDSVAMKAD----VELGGTDQKFNLLMGRELQREWGQTPQCVLTMPLLEGLDGVNKMSK 230

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EIN 296
           +L   I +++   +P   +    +I D  ++ + + L+   ++EI+++            
Sbjct: 231 SLGNYIGISE---APDEIFGKVMSISDELMLRYYELLSDKSLAEIEQLKSGLADGSLHPM 287

Query: 297 EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLI 356
            AKK +  EI T  HG    + A    ++ F  +     MP   +S       + L   +
Sbjct: 288 AAKKALGREIVTRFHGAGAGDTAEENFVKRFKENEIPDEMPQ--VSYGTADCPLLLAKAL 345

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            +AG   S  EARR +    +K+N   +SN  L++        G   +  GK+  +   +
Sbjct: 346 TEAGLTKSNGEARRSIDQGGVKLNGEKVSNTNLELTAA-----GEYIVQIGKRRFVRIVI 400

Query: 417 C 417
            
Sbjct: 401 A 401


>gi|288939873|ref|YP_003442113.1| tyrosyl-tRNA synthetase [Allochromatium vinosum DSM 180]
 gi|288895245|gb|ADC61081.1| tyrosyl-tRNA synthetase [Allochromatium vinosum DSM 180]
          Length = 400

 Score =  405 bits (1041), Expect = e-111,   Method: Composition-based stats.
 Identities = 104/409 (25%), Positives = 181/409 (44%), Gaps = 23/409 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           L +RG   +I     L     QG  +    G+D TA  LH GH   +  L   Q+ GH+ 
Sbjct: 10  LIQRGT-EEILLQDALRKKLEQGRPLRIKAGFDPTAPDLHLGHTVLINKLRQFQELGHEI 68

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           + L+G  T +IGDP+ +  +R+ +  ++I+EN +  K      +     +    +L N  
Sbjct: 69  LFLIGDFTGMIGDPTGKSVTRKPLSREQIEENAQTYKDQVFRILDPDKTR----ILFNSH 124

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           WL  +     L ++ +  +V RML  +    R K  Q ++  EF Y ++Q YD V L  +
Sbjct: 125 WLDDLGTAG-LVQLAARQTVARMLERDDFSKRYKSGQPIAIHEFLYPLIQGYDSVALRAD 183

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNK 249
               +++GG+DQ  N++ G  L E         +T P+L    G  KM K+L   I +  
Sbjct: 184 ----VELGGTDQKFNLLMGRQLQEAYGQEAQVVITLPILEGLDGVQKMSKSLGNYIGI-- 237

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIATEIT 307
              +P   +    +I D  +  + + L+   +SEI+   +   +G    + K  +  E+ 
Sbjct: 238 -ADAPEEMFGKLMSISDDLMWRYFELLSFRELSEIEDWRRAVSEGANPRDIKFELGLELV 296

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
           T  HG E+A KA  A +  F       +MP + ++  +   G+ L  L+ +AG   ST+E
Sbjct: 297 TRFHGAEQARKAQEAFVARFQKGAMPDNMPFVELACSD-DAGLPLANLLKEAGLVASTSE 355

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           A R ++  A++I+   + + +    +             GK       L
Sbjct: 356 AIRMVRQGAVRIDGERVEDVQQVCAV-----GAEHIYQVGKHRFAKVRL 399


>gi|157126543|ref|XP_001660920.1| tyrosyl-tRNA synthetase [Aedes aegypti]
 gi|108873226|gb|EAT37451.1| tyrosyl-tRNA synthetase [Aedes aegypti]
          Length = 463

 Score =  405 bits (1041), Expect = e-111,   Method: Composition-based stats.
 Identities = 134/436 (30%), Positives = 210/436 (48%), Gaps = 28/436 (6%)

Query: 7   DFLSILSERGFIHQISNPRELDI---LCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           + L  L +RGF   +     +D    +      T Y G+D TA SLH G+L  ++ L   
Sbjct: 26  NILK-LQDRGFFQDVFPAEAIDKARSMLGASPQTVYAGFDPTADSLHVGNLLVIIGLLHA 84

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGI----FSSFIKYGTG 119
           Q+ GH+PI+L+GG T  IGDPS R   R+ M    +  N+  I       F +  K+   
Sbjct: 85  QRAGHQPIALLGGATGQIGDPSGRKTERQAMLLDMVNHNLACIGSQMDTIFQNHRKFLWE 144

Query: 120 K-------TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFL 172
           K          L++NN  W   + ++  +  +G  F +  MLS  SV+SRL+ E  +SF 
Sbjct: 145 KRGHSGALKPVLVVNNADWYRELNFVQFISSVGRHFRMGSMLSRASVQSRLQSEGGMSFT 204

Query: 173 EFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTA 232
           EF Y I QAYD++ L K ++CR Q+GGSDQ GNI+ G +L  R+    ++ LT PL+T  
Sbjct: 205 EFTYQIFQAYDWLHLLKAHNCRFQLGGSDQMGNIMSGHELISRVDRKDVYGLTLPLITNE 264

Query: 233 SGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG 292
            G K GK+   A+WL+ + TSPY  +Q++    D++V    K LT +P+ EI  +     
Sbjct: 265 EGDKFGKSAGNAVWLSGDKTSPYALYQFFVRTPDSEVEKLLKLLTFMPLDEIRSVMARHQ 324

Query: 293 --KEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI----------S 340
              E+ EA+K +A E+T +VHG E  +KA       +  ++ +     +           
Sbjct: 325 RTPELWEAQKKLAQELTLLVHGEEGLKKAEDITAALYSGNVEALGELEVKDIKQTFGGAP 384

Query: 341 ISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ-DFDST 399
           +       GM +L + ++A    +  +A R + +    IN +   N    +         
Sbjct: 385 VVDILPEPGMTVLQVAMRAKCFPTEKDAIRIIGAGGFTINLNKAKNPAEVLAPGVHILKN 444

Query: 400 GNIKLSFGKKNHIICH 415
           G   L  GK+N+ I  
Sbjct: 445 GISLLRVGKRNYYIVK 460


>gi|223041527|ref|ZP_03611728.1| tyrosyl-tRNA synthetase [Actinobacillus minor 202]
 gi|223017622|gb|EEF16032.1| tyrosyl-tRNA synthetase [Actinobacillus minor 202]
          Length = 396

 Score =  405 bits (1041), Expect = e-111,   Method: Composition-based stats.
 Identities = 105/419 (25%), Positives = 180/419 (42%), Gaps = 27/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M       L+ L  RG     S    ++ L     +   +G D TA  +H GH   L  L
Sbjct: 1   MTQPIETILAELK-RGVEDVYSEADLIEKLKENRPLRVKLGADPTAPDIHLGHTVVLNKL 59

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GH+ I L+G  T+ +GDPS ++ +R  +  +++  N E  K      +     +
Sbjct: 60  RQFQNFGHEVIFLIGDFTATVGDPSGKNATRPPLSREDVLRNAETYKEQIYKILDPQKTR 119

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               ++ N  WL  +  + ++R + S ++V RML  +  + R    QS++  EF Y +LQ
Sbjct: 120 ----IVFNSDWLGELGTVGMIR-LASNYTVARMLERDDFKKRFANNQSIAIHEFIYPLLQ 174

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGK 239
            +D V L    +  +++GG+DQ  N++ G +L +        A+T PLL    G  KM K
Sbjct: 175 GHDSVAL----EADIELGGTDQTFNLLIGRELQKAAGXKPQVAMTLPLLVGLDGEKKMSK 230

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINE 297
           +L   I + +   +P   +    +I D  +  +   L+  P++EI ++      GK   +
Sbjct: 231 SLGNYIGVTE---APNEMFGKIMSISDELMWDWYNLLSFRPLTEIAQLKADVEAGKNPRD 287

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A EI    H   +A+ A    +  F        MP  +         +GL TL+ 
Sbjct: 288 VKILLAKEIIARFHSEADADAAEQEFINRFQKGAMPDEMPEFT-----FEGEIGLATLLK 342

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +AG   ST+EA R  +   +KI+   + + K           G      GK+      +
Sbjct: 343 EAGLVPSTSEAIRSAQQGGVKIDGEKVDDVKQN------AQKGTFVYQVGKRKFARVTV 395


>gi|297516892|ref|ZP_06935278.1| tyrosyl-tRNA synthetase [Escherichia coli OP50]
          Length = 295

 Score =  405 bits (1041), Expect = e-111,   Method: Composition-based stats.
 Identities = 128/287 (44%), Positives = 182/287 (63%), Gaps = 1/287 (0%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 4   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +QE ++KI+   + F+ +  G+  A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDCGENSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDF 184
            NN  W  ++  +  LR+IG  FSVN+M++ E+V+ RL RE Q +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGNMDVLTFLRDIGKHFSVNQMINKEAVKQRLNREDQGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L K Y   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T A GTK GKT  GA
Sbjct: 184 ACLNKQYGVVLQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGA 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ 291
           +WL+ + TSPY F+Q+W N  DADV  F K  T + + EI+ + +  
Sbjct: 244 VWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINALEEED 290


>gi|239995870|ref|ZP_04716394.1| tyrosyl-tRNA synthetase [Alteromonas macleodii ATCC 27126]
          Length = 399

 Score =  405 bits (1041), Expect = e-111,   Method: Composition-based stats.
 Identities = 97/406 (23%), Positives = 182/406 (44%), Gaps = 22/406 (5%)

Query: 15  RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLM 74
           RG    +     ++ L S   +T   G+D TA  LH GH   +  L   Q+ GHK + L+
Sbjct: 13  RGVDEILPEEDLIEKLKSGKTLTIKAGFDPTAPDLHLGHTVLINKLRTFQQLGHKVVFLI 72

Query: 75  GGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCS 134
           G  T +IGDP+ ++ +R+ +  +++ EN +  +      +     +    +  N  W+  
Sbjct: 73  GDFTGLIGDPTGKNVTRKPLSKEQVLENAKTYQEQVFKILDEDKTE----IRFNSEWMDG 128

Query: 135 IKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCR 194
           +    +++ + +  +V RML  +  + R    Q ++  EF Y ++Q +D V L  +    
Sbjct: 129 LGAAGMIK-LAASQTVARMLERDDFKKRYNNGQPIAIHEFLYPLVQGWDSVALESD---- 183

Query: 195 LQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTS 253
           +++GG+DQ  N++ G +L +     +   +  PLL    G  KM K+L+  I +     +
Sbjct: 184 VELGGTDQRFNLLMGRELQKEQGQKQQSIVMVPLLEGLDGVQKMSKSLNNYIGIT---DA 240

Query: 254 PYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATEITTMVH 311
           P + +    +I D  +  +   L+  P+ EI  +      G+   + K ++A EI    H
Sbjct: 241 PNDMFGKVMSISDDLMWRYYDLLSFRPLEEIAELKTRVANGENPRDIKIMLAKEIIARFH 300

Query: 312 GREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRH 371
               AE A    ++ F  +     MP + I+  +   G+ +  L+ +A    ST++A R 
Sbjct: 301 DDAAAEGAHQDFIQRFQKNAIPDDMPELEIALSD--EGIAIGNLLKEANLVGSTSDAMRM 358

Query: 372 LKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           +K  A+KIN   + + +L I  +     G      GK+      L 
Sbjct: 359 IKQGAVKINGDKVEDTRLVITEK-----GENVYQVGKRKFARITLA 399


>gi|190150753|ref|YP_001969278.1| tyrosyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 7
           str. AP76]
 gi|307264155|ref|ZP_07545749.1| Tyrosyl-tRNA synthetase 2 [Actinobacillus pleuropneumoniae serovar
           13 str. N273]
 gi|189915884|gb|ACE62136.1| tyrosyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 7
           str. AP76]
 gi|306870529|gb|EFN02279.1| Tyrosyl-tRNA synthetase 2 [Actinobacillus pleuropneumoniae serovar
           13 str. N273]
          Length = 396

 Score =  405 bits (1041), Expect = e-111,   Method: Composition-based stats.
 Identities = 102/411 (24%), Positives = 179/411 (43%), Gaps = 27/411 (6%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L+ L  RG  +  S    ++ L     +   +G D TA  +H GH   L  L   Q+ GH
Sbjct: 9   LAELK-RGVENIYSEEDLIEKLKENRPLRIKLGADPTAPDIHLGHTVVLNKLRQFQQLGH 67

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           + I L+G  T ++GDPS ++ +R  +  +++  N E  K      +          ++ N
Sbjct: 68  EVIFLIGDFTGMVGDPSGKNSTRPPLTREDVLRNAETYKQQLFKILD----PNKTRVVFN 123

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL  +    ++R + S ++V RML  +  + R    QS++  EF Y +LQ +D V L 
Sbjct: 124 SEWLGKLGTEGMIR-LASNYTVARMLERDDFKKRFTNNQSIAIHEFIYPLLQGHDSVAL- 181

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWL 247
              +  +++GG+DQ  N++ G +L +        A+T PLL    G  KM K+L   I +
Sbjct: 182 ---EADVELGGTDQTFNLLVGRELQKSAGQKPQVAMTLPLLVGLDGEKKMSKSLGNYIGV 238

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATE 305
                +P + +    +I D  +  +   L+  P+ EI ++     +GK   + K ++A E
Sbjct: 239 T---DAPSDMFGKVMSISDELMWDWYNLLSFRPLDEIAQLKANVAEGKNPRDVKILLAKE 295

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           +    H +  A+ A    +  F        MP  +         +GL TL+ +AG   ST
Sbjct: 296 LIARFHDQVAADSAEQEFINRFQKGAIPDEMPEFT-----FEGEIGLATLLKEAGLVAST 350

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +EA R  +   +KI+   + + +           G      GK+      +
Sbjct: 351 SEAIRSAQQGGVKIDGEKVEDVRQN------AQQGTFVYQVGKRKFARVTV 395


>gi|94309362|ref|YP_582572.1| tyrosyl-tRNA synthetase [Cupriavidus metallidurans CH34]
 gi|93353214|gb|ABF07303.1| Tyrosyl-tRNA synthetase [Cupriavidus metallidurans CH34]
          Length = 413

 Score =  404 bits (1040), Expect = e-111,   Method: Composition-based stats.
 Identities = 103/414 (24%), Positives = 183/414 (44%), Gaps = 30/414 (7%)

Query: 11  ILSERGFIHQISNPRELDILCSQG----VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
            +++RG    +     L  L         +   +G D TA  +H GH   L  L  LQ  
Sbjct: 23  EITKRGCDELLVESEWLQKLARSEATGVPLRIKLGLDPTAPDIHLGHTVVLNKLRQLQDL 82

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+ I L+G  TS IGDPS R+ +R  +  ++I+ N +      S  +     +    + 
Sbjct: 83  GHQVIFLIGDFTSTIGDPSGRNSTRPPLTREQIEANAQTYYRQASLVLDPARTE----IR 138

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
            N  W   +    ++ ++ + ++V RM+  +    R +    +S  EF Y ++Q YD V 
Sbjct: 139 YNSEWCDPLGARGMI-QLAAKYTVARMMERDDFTKRFRSGIPISVHEFLYPLMQGYDSVA 197

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAI 245
           L  +    L++GG+DQ  N++ G +L +         LT PLL    G  KM K+ +  I
Sbjct: 198 LKSD----LELGGTDQKFNLLVGRELQKEYGQESQCILTMPLLVGLDGVEKMSKSKNNYI 253

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIA 303
            + +   +P + +    +I D  +  +   L+  PMSEID  +     G+   + K  +A
Sbjct: 254 GVTE---APNDMFGKLMSISDELMWQYYTLLSFRPMSEIDLMKSEVALGRNPRDCKVALA 310

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
            EI T  H + +AEKA                +P +S+        +G+  L+ +A    
Sbjct: 311 QEIVTRFHSQADAEKALEDF-NHRARGGVPDDIPAVSLE----GAPLGIAQLLKQANLVP 365

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           ST+EA R+++   +KI+ +++S++  ++        G   +  GK+      L 
Sbjct: 366 STSEANRNIEQGGVKIDGAVVSDKSTKVVA------GTYVVQVGKRRFARVTLS 413


>gi|299067944|emb|CBJ39158.1| tyrosyl-tRNA synthetase [Ralstonia solanacearum CMR15]
          Length = 423

 Score =  404 bits (1040), Expect = e-111,   Method: Composition-based stats.
 Identities = 102/414 (24%), Positives = 186/414 (44%), Gaps = 30/414 (7%)

Query: 11  ILSERG----FIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
            +++RG     I      +      +   +   +G D TA  +H GH   L  +  LQ  
Sbjct: 33  EVTQRGCDELLIAAEWEQKLARSAATGVPLRIKLGLDPTAPDIHIGHTVVLNKMRQLQDL 92

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+ I L+G  TS IGDPS R+ +R  +  ++I+ N +      S  +     +    + 
Sbjct: 93  GHQVIFLIGDFTSTIGDPSGRNATRPPLTREQIEANAQTYYRQASMVLDPSKTE----IR 148

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
            N  W   +    ++ ++ + ++V RM+  +    R K    +S  EF Y ++Q YD V 
Sbjct: 149 YNSEWCDPLGARGII-QLAAKYTVARMMERDDFTKRYKAGVPISVHEFLYPLMQGYDSVA 207

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAI 245
           L  +    L++GG+DQ  N++ G +L +         LT PLL    G  KM K+    +
Sbjct: 208 LKSD----LELGGTDQKFNLLVGRELQKEYGQEPQCILTMPLLVGLDGVEKMSKSKGNYV 263

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIA 303
            +++   +P   +    +I D  + ++   L+  P++EID M +    G+   + K ++A
Sbjct: 264 GISE---APNEMFGKLMSISDDLMWTYYTLLSFRPLAEIDLMKEEIALGRNPRDCKVLLA 320

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
            EI    H   +AE+A                +P I +S       +G+  L+ +AG   
Sbjct: 321 QEIIARFHSPADAERALEDF-NHRARGGVPDDIPQIELS----GAPLGIAQLLKQAGLCP 375

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           ST+EA R+++   +KI+ ++IS++ L+++       G   +  GK+      L 
Sbjct: 376 STSEANRNIEQGGVKIDGTVISDKGLKVEA------GTFVMQVGKRRFARVVLS 423


>gi|54307738|ref|YP_128758.1| tyrosyl-tRNA synthetase [Photobacterium profundum SS9]
 gi|81400172|sp|Q6LUR9|SYY_PHOPR RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|46912161|emb|CAG18956.1| putative tyrosyl-tRNA synthetase [Photobacterium profundum SS9]
          Length = 395

 Score =  404 bits (1040), Expect = e-111,   Method: Composition-based stats.
 Identities = 102/419 (24%), Positives = 178/419 (42%), Gaps = 28/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M + +     I  +RG    I     +  L     +   +G D TA  +H GH   L  L
Sbjct: 1   MASIEQALAEI--KRGIDELIPEEELIAKLKENRPLRIKLGADPTAPDIHLGHTVILNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH    L+G  T ++GDP+ ++ +R  +  +++  N E  K      +     K
Sbjct: 59  RTFQELGHDVTFLIGDFTGMVGDPTGKNTTRPPLTREDVLANAETYKEQVFKILDPAKTK 118

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N TWL  +    ++R + S  +V RML  +  + R    + ++  EF Y +LQ
Sbjct: 119 ----IEFNSTWLSELGAEGMIR-LASNQTVARMLERDDFKKRYNGGRPIAIHEFMYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGK 239
            YD V +    +  +++GG+DQ  N++ G +L +         LT PLL    G  KM K
Sbjct: 174 GYDSVAM----ETDVELGGTDQKFNLLMGRELQKSHGQKPQVVLTMPLLVGLDGVKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINE 297
           +    I +++    P   +    +I D  + ++ + L+  P+ EI++  +    GK   +
Sbjct: 230 SAHNYIGVSE---VPTEMFGKIMSISDDLMWNYFECLSFRPLEEIEQFKQDMANGKNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A EI    H   +A+ A    +  F      + MP +     E   G+ +  L+ 
Sbjct: 287 VKILLAKEIIARFHSEADADAAEQEFINRFQKGAMPEEMPEL-----EFEAGIAISNLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            AG   ST++A R ++    KI+ + I + KL          G      GK+      L
Sbjct: 342 DAGLVNSTSDAMRMIRQGGAKIDGNKIEDTKLIPAA------GTAVYQVGKRKFARITL 394


>gi|254246315|ref|ZP_04939636.1| Tyrosyl-tRNA synthetase, class Ib [Burkholderia cenocepacia PC184]
 gi|124871091|gb|EAY62807.1| Tyrosyl-tRNA synthetase, class Ib [Burkholderia cenocepacia PC184]
          Length = 475

 Score =  404 bits (1040), Expect = e-110,   Method: Composition-based stats.
 Identities = 96/416 (23%), Positives = 188/416 (45%), Gaps = 31/416 (7%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           K     +L E  F  +++         +   +   +G D TA  +H GH   L  +  LQ
Sbjct: 87  KRGVDELLIEEEFAQKLA-----RSAATGTPLRIKLGLDPTAPDIHIGHTVVLNKMRQLQ 141

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GH  I L+G  TS+IGDPS R+ +R  +  ++I+ N +      +  +     +    
Sbjct: 142 DLGHTVIFLIGDFTSLIGDPSGRNATRPPLTREQIESNAKTYFEQAALVLDRDKTE---- 197

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           +  N  W   +    +++ + S ++V R+L  E    R +    +S  EF Y ++Q YD 
Sbjct: 198 IRYNSEWSMPLGADGMIK-LASRYTVARILEREDFTKRFQGGVPISIHEFLYPLMQGYDS 256

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSG 243
           V L  +    L++GG+DQ  N++ G +L ++    +   LT PLL    G  KM K+   
Sbjct: 257 VALNAD----LELGGTDQKFNLLVGRELQKQYGQEQQCILTMPLLEGLDGVEKMSKSKGN 312

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKI 301
            + ++++   P + +    +I D  +  + + L+   + EI   +     G+   + K +
Sbjct: 313 YVGISEK---PTDMFGKLMSISDTLMWRYFELLSFRSLDEIAGFKREAEGGRNPRDFKVL 369

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGF 361
           +A EI    H + +AE+A                +P+++++       + +  L+ +AG 
Sbjct: 370 LAQEIVARFHSQPDAERALEDF-NHRAKGGVPDDIPSVTLA----GAPLAIGQLLKQAGL 424

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
             ST+EA R+++   +KI+ + +S++ L+++  +F       +  GK+      L 
Sbjct: 425 VPSTSEALRNIEQGGVKIDGATVSDKGLKVEAGEF------VVQVGKRRFARVTLT 474


>gi|237804411|ref|YP_002888565.1| tyrosyl-tRNA synthetase [Chlamydia trachomatis B/TZ1A828/OT]
 gi|231272711|emb|CAX09615.1| tyrosyl-tRNA synthetase [Chlamydia trachomatis B/TZ1A828/OT]
          Length = 412

 Score =  404 bits (1040), Expect = e-110,   Method: Composition-based stats.
 Identities = 136/421 (32%), Positives = 215/421 (51%), Gaps = 25/421 (5%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            +  L +RG +   S    L+ L     V+AY+G+D TA SLH GH   +  L  L   G
Sbjct: 4   LIDNLKKRGILDNSS--AGLESLTV--PVSAYLGFDPTAPSLHIGHWIGICFLRRLAAYG 59

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
             P++L+GG T +IGDPS +   R ++   ++ +N +KI    +S++          ++N
Sbjct: 60  ITPVALVGGATGMIGDPSGKSVERSLLDQAQVLDNSKKIAAALASYL------PGIRIVN 113

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL S+  +D LR++G  F +  ML+ + V+ R+  E+ +S+ EF+Y++LQ+YDF  L
Sbjct: 114 NADWLGSLSMVDFLRDVGKHFRLGSMLAKDVVKQRVYSEEGISYTEFSYLLLQSYDFAHL 173

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            K ++  LQ GGSDQWGNI  GID   R    + + LT PLLT + G K+GKT SG IWL
Sbjct: 174 FKEHNVVLQCGGSDQWGNITSGIDYIRRRGLGQAYGLTYPLLTDSKGKKIGKTESGTIWL 233

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           +  +T PY  +QY+  + D ++    + LT L   EI  + +    +    KK IA  I 
Sbjct: 234 DPALTPPYELFQYFLRLPDQEISKVMRTLTLLDNEEIFALDERLTSDPQAVKKYIAEVIV 293

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGL------------LTL 355
             VHG E   +A  A    F     S  +  + +    V  G+G+            L +
Sbjct: 294 KDVHGSEGLAQAQAATESFFASKGKS--ITEVELVAL-VESGVGVKVARADLIGKRWLDI 350

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +V+ GF +S  +ARR ++   + IN   +++E+  +          + LS GK+   +  
Sbjct: 351 VVELGFCSSRGQARRLIQQRGLYINQEPLADEQSILDGTQLCFDRYVLLSQGKRKKQVID 410

Query: 416 L 416
           L
Sbjct: 411 L 411


>gi|76788775|ref|YP_327861.1| tyrosyl-tRNA synthetase [Chlamydia trachomatis A/HAR-13]
 gi|97197647|sp|Q3KMV9|SYY_CHLTA RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|76167305|gb|AAX50313.1| tyrosyl-tRNA synthetase [Chlamydia trachomatis A/HAR-13]
          Length = 412

 Score =  404 bits (1040), Expect = e-110,   Method: Composition-based stats.
 Identities = 135/419 (32%), Positives = 214/419 (51%), Gaps = 21/419 (5%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            +  L +RG +   S    L+ L     V+AY+G+D TA SLH GH   +  L  L   G
Sbjct: 4   LIDNLKKRGILDNSS--AGLESLTV--PVSAYLGFDPTAPSLHIGHWIGICFLRRLAAYG 59

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
             P++L+GG T +IGDPS +   R ++   ++ +N +KI    +S++          ++N
Sbjct: 60  ITPVALVGGATGMIGDPSGKSVERSLLDQAQVLDNSKKIAAALASYL------PGIRIVN 113

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL S+  +D LR++G  F +  ML+ + V+ R+  E+ +S+ EF+Y++LQ+YDF  L
Sbjct: 114 NADWLGSLSMVDFLRDVGKHFRLGSMLAKDVVKQRVYSEEGISYTEFSYLLLQSYDFAHL 173

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            K ++  LQ GGSDQWGNI  GID   R    + + LT PLLT + G K+GKT SG IWL
Sbjct: 174 FKEHNVVLQCGGSDQWGNITSGIDYIRRRGLGQAYGLTYPLLTDSKGKKIGKTESGTIWL 233

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           +  +T PY  +QY+  + D ++    + LT L   EI  + +    +    KK IA  I 
Sbjct: 234 DPALTPPYELFQYFLRLPDQEISKVMRTLTLLDNEEIFALDERLTSDPQAVKKYIAEVIV 293

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGL----------LTLIV 357
             VHG E   +A  A    F     S     + ++  E   G+ +          L ++V
Sbjct: 294 KDVHGSEGLAQAQAATESFFASKGKSITEAEL-VALVESGVGVKVARTDLIGKRWLDIVV 352

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           + GF +S  +ARR ++   + IN   +++E+  +          + LS GK+   +  L
Sbjct: 353 ELGFCSSRGQARRLIQQRGLYINQEPLADEQSILDGTQLCFDRYVLLSQGKRKKQVIDL 411


>gi|313901940|ref|ZP_07835357.1| tyrosyl-tRNA synthetase [Thermaerobacter subterraneus DSM 13965]
 gi|313467786|gb|EFR63283.1| tyrosyl-tRNA synthetase [Thermaerobacter subterraneus DSM 13965]
          Length = 435

 Score =  404 bits (1039), Expect = e-110,   Method: Composition-based stats.
 Identities = 100/416 (24%), Positives = 175/416 (42%), Gaps = 29/416 (6%)

Query: 11  ILSERGFIHQISNPRELDILCSQ----GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
            L  RG    +S    L  L         +   +G D TA  LH GH   L  L   Q  
Sbjct: 39  ELLRRGAAEIVSEEELLQKLQRSVETGRPLRVKLGLDPTAPDLHIGHTVVLRKLRQFQDL 98

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+ + ++G  T  IGDP+ +  +R  +  ++++ N           +     +    + 
Sbjct: 99  GHQVVLIIGDFTGRIGDPTGKSVTRPQLTEEQVRANARTYAEQLGRILDMERTE----LT 154

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
            N  WL  + + D++R + + ++V RML  +    R +  + ++  EF Y + QAYD V 
Sbjct: 155 FNARWLGPMTFADVIR-LAARYTVARMLERDDFAQRYREGRPIAIHEFLYPLAQAYDSVA 213

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAI 245
           +  +    +++GG+DQ  N++ G ++          AL  PLL    G  KM K+L   I
Sbjct: 214 VRAD----VELGGTDQKFNLLVGREIQREYGQEAQVALLMPLLEGTDGKDKMSKSLGNYI 269

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAKKII 302
            +      P   +    +I D  +V +    T L M EI R+ +          +AK  +
Sbjct: 270 AI---ADPPGEMFGKTMSIPDELIVKYMVLATDLDMGEIRRLEQGMASGQVNPRDAKLRL 326

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFA 362
           A  +  M HGR  A+ A    +  F        MP + +    +      + L+  AG A
Sbjct: 327 AHALVRMYHGRAAADAAQEEFLRVFSRHELPAEMPEVVLPAPRLDA----VRLLRAAGMA 382

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLCG 418
           +S +EARR ++  A++++   +++ + ++   D        L  GK+      L G
Sbjct: 383 SSNSEARRLIEQGAVRLDGQRVASPQDELAPAD-----GAVLQVGKRRFARLRLPG 433


>gi|114048453|ref|YP_739003.1| tyrosyl-tRNA synthetase [Shewanella sp. MR-7]
 gi|113889895|gb|ABI43946.1| tyrosyl-tRNA synthetase [Shewanella sp. MR-7]
          Length = 398

 Score =  404 bits (1039), Expect = e-110,   Method: Composition-based stats.
 Identities = 98/417 (23%), Positives = 182/417 (43%), Gaps = 25/417 (5%)

Query: 6   SDFLSILSE--RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           +D   +L+E  RG    +     L+ L     +   +G D TA  +H GH   L  L   
Sbjct: 2   ADLDQVLAEIRRGTDEILLESDLLEKLKEGRPLRIKLGADPTAPDIHLGHTVILNKLRLF 61

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q+ GH+ I L+G  T ++GDPS ++ +R  +  +++  N E  K      +     +   
Sbjct: 62  QELGHEVIFLIGDFTGMVGDPSGKNSTRPPLTREQVLANAETYKEQVYKILDPAKTR--- 118

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            +  N +WL  +    ++R + S  +V RM+  +  + R    QS++  EF Y +LQ YD
Sbjct: 119 -IEFNSSWLEPLGAAGMIR-LASQQTVARMMERDDFKKRYASGQSIAIHEFMYPLLQGYD 176

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLS 242
            V L  +    +++GG+DQ  N++ G +L +         +  PLL    G  KM K+  
Sbjct: 177 SVALKAD----VELGGTDQKFNLLMGRELQKAEGQKPQAVIMMPLLEGLDGVKKMSKSAH 232

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKK 300
             I +++        +    +I D  +  + + L+  P++EI++  +    G    + K 
Sbjct: 233 NYIGVSEPAN---EMFGKIMSISDELMWRYFELLSFRPLAEIEQFKQDIANGANPRDTKI 289

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
            +A EI    H +  AE A  A ++ F        +P + ++  E   G+ +  L+  A 
Sbjct: 290 ALAKEIIARFHDQAAAESAHQAFIDRFQKGAIPDDIPEVELAAGE---GLAIANLLKDAD 346

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
              ST++A R +K  A+K++   + + ++ +               GK+      L 
Sbjct: 347 LVGSTSDAMRMIKQGAVKMDGEKVDDSRMTLSA-----GTVAVFQVGKRKFAKVTLV 398


>gi|15604781|ref|NP_219565.1| tyrosyl-tRNA synthetase [Chlamydia trachomatis D/UW-3/CX]
 gi|166154283|ref|YP_001654401.1| tyrosyl-tRNA synthetase [Chlamydia trachomatis 434/Bu]
 gi|166155158|ref|YP_001653413.1| tyrosyl-tRNA synthetase [Chlamydia trachomatis L2b/UCH-1/proctitis]
 gi|237802496|ref|YP_002887690.1| tyrosyl-tRNA synthetase [Chlamydia trachomatis B/Jali20/OT]
 gi|301335534|ref|ZP_07223778.1| tyrosyl-tRNA synthetase [Chlamydia trachomatis L2tet1]
 gi|14195228|sp|O84065|SYY_CHLTR RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|254783579|sp|B0B9H0|SYY_CHLT2 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|254783580|sp|B0BB49|SYY_CHLTB RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|3328456|gb|AAC67653.1| tyrosyl tRNA Synthetase [Chlamydia trachomatis D/UW-3/CX]
 gi|165930271|emb|CAP03757.1| tyrosyl-tRNA synthetase [Chlamydia trachomatis 434/Bu]
 gi|165931146|emb|CAP06711.1| tyrosyl-tRNA synthetase [Chlamydia trachomatis L2b/UCH-1/proctitis]
 gi|231273730|emb|CAX10509.1| tyrosyl-tRNA synthetase [Chlamydia trachomatis B/Jali20/OT]
 gi|296438367|gb|ADH20520.1| tyrosyl-tRNA synthetase [Chlamydia trachomatis E/11023]
 gi|297748192|gb|ADI50738.1| Tyrosyl-tRNA synthetase [Chlamydia trachomatis D-EC]
 gi|297749072|gb|ADI51750.1| Tyrosyl-tRNA synthetase [Chlamydia trachomatis D-LC]
          Length = 412

 Score =  404 bits (1039), Expect = e-110,   Method: Composition-based stats.
 Identities = 135/419 (32%), Positives = 214/419 (51%), Gaps = 21/419 (5%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            +  L +RG +   S    L+ L     V+AY+G+D TA SLH GH   +  L  L   G
Sbjct: 4   LIDNLKKRGILDNSS--AGLESLTV--PVSAYLGFDPTAPSLHIGHWIGICFLRRLAAYG 59

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
             P++L+GG T +IGDPS +   R ++   ++ +N +KI    +S++          ++N
Sbjct: 60  ITPVALVGGATGMIGDPSGKSVERSLLDQAQVLDNSKKIAAALASYL------PGIRIVN 113

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL S+  +D LR++G  F +  ML+ + V+ R+  E+ +S+ EF+Y++LQ+YDF  L
Sbjct: 114 NADWLGSLSMVDFLRDVGKHFRLGSMLAKDVVKQRVYSEEGISYTEFSYLLLQSYDFAHL 173

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            K ++  LQ GGSDQWGNI  GID   R    + + LT PLLT + G K+GKT SG IWL
Sbjct: 174 FKEHNVVLQCGGSDQWGNITSGIDYIRRRGLGQAYGLTYPLLTDSKGKKIGKTESGTIWL 233

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           +  +T PY  +QY+  + D ++    + LT L   EI  + +    +    KK IA  I 
Sbjct: 234 DPALTPPYELFQYFLRLPDQEISKVMRTLTLLDNEEIFALDERLTSDPQAVKKYIAEVIV 293

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGL----------LTLIV 357
             VHG E   +A  A    F     S     + ++  E   G+ +          L ++V
Sbjct: 294 KDVHGSEGLAQAQAATESFFASKGKSITEAEL-VALVESGVGVKVARADLIGKRWLDIVV 352

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           + GF +S  +ARR ++   + IN   +++E+  +          + LS GK+   +  L
Sbjct: 353 ELGFCSSRGQARRLIQQRGLYINQEPLADEQSILDGTQLCFDRYVLLSQGKRKKQVIDL 411


>gi|83749319|ref|ZP_00946316.1| Tyrosyl-tRNA synthetase tyrS [Ralstonia solanacearum UW551]
 gi|83723997|gb|EAP71178.1| Tyrosyl-tRNA synthetase tyrS [Ralstonia solanacearum UW551]
          Length = 392

 Score =  404 bits (1039), Expect = e-110,   Method: Composition-based stats.
 Identities = 103/414 (24%), Positives = 186/414 (44%), Gaps = 30/414 (7%)

Query: 11  ILSERG----FIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
            +++RG     I      +      +   +   +G D TA  +H GH   L  +  LQ  
Sbjct: 2   EITQRGCDELLIAAEWEQKLARSAATGVPLRIKLGLDPTAPDIHIGHTVVLNKMRQLQDL 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+ I L+G  TS IGDPS R+ +R  +  ++I+ N +      S  +     +    + 
Sbjct: 62  GHQVIFLIGDFTSTIGDPSGRNATRPPLTREQIEANAQTYYRQASMVLDPSKTE----IR 117

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
            N  W   +    ++ ++ + ++V RM+  +    R K    +S  EF Y ++Q YD V 
Sbjct: 118 YNSEWSDPLGARGMI-QLAARYTVARMMERDDFTKRYKAGVPISVHEFLYPLMQGYDSVA 176

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAI 245
           L  +    L++GG+DQ  N++ G +L +         LT PLL    G  KM K+    +
Sbjct: 177 LKSD----LELGGTDQKFNLLVGRELQKEYGQEPQCILTMPLLVGLDGVEKMSKSKGNYV 232

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKKIIA 303
            + +    P   +    +I D  + ++   L+  PM+EI+RM +    G+   + K ++A
Sbjct: 233 GIAE---VPGEMFGKLMSISDDLMWTYFTLLSFRPMAEIERMKQEVALGRNPRDCKVLLA 289

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
            EI    H + +AE+A                +P I +S       +G+  L+ +AG   
Sbjct: 290 QEIIARFHSQADAERALEDF-NHRARGGVPDDIPQIELS----GAPLGIAQLLKQAGLCP 344

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           ST+EA R+++   +KI+ ++IS++ L+++       G   +  GK+      L 
Sbjct: 345 STSEANRNIEQGGVKIDGTVISDKGLKVEA------GTFVMQVGKRRFARVVLS 392


>gi|83653807|gb|ABC37870.1| tyrosyl-tRNA synthetase [Burkholderia thailandensis E264]
          Length = 489

 Score =  404 bits (1039), Expect = e-110,   Method: Composition-based stats.
 Identities = 99/416 (23%), Positives = 186/416 (44%), Gaps = 31/416 (7%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           K     +L E  F  +++         +   +   +G D TA  +H GH   L  +  LQ
Sbjct: 101 KRGVDELLIEEEFAQKLA-----RSAATGKPLRIKLGLDPTAPDIHLGHTVVLNKMRQLQ 155

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GH  I L+G  TS+IGDPS R+ +R  +  ++I+ N +      +  +     +    
Sbjct: 156 DLGHTVIFLIGDFTSLIGDPSGRNATRPPLTREQIESNAKTYFEQAALVLDREKTE---- 211

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           +  N  W   +    +++ + S ++V RML  E    R +    +S  EF Y ++Q YD 
Sbjct: 212 IRYNSEWSMPLGADGMIK-LASRYTVARMLEREDFTKRFQGGIPISIHEFLYPLMQGYDS 270

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSG 243
           V L  +    L++GG+DQ  N++ G +L ++    +   LT PLL    G  KM K+   
Sbjct: 271 VALNAD----LELGGTDQKFNLLVGRELQKQYGQEQQCILTMPLLEGLDGVEKMSKSKGN 326

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKI 301
            + + ++   P + +    +I D  +  + + L+   + EI   R     G+   + K +
Sbjct: 327 YVGIGEK---PNDMFGKLMSISDVLMWRYFELLSFRSLDEIARLRGEAEGGRNPRDFKVM 383

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGF 361
           +A EI    H + +AE+A                +PT++++       + +  L+ +AG 
Sbjct: 384 LAQEIVARFHSQADAERALEDF-NHRAKGGVPDDIPTVTLA----GAPLAIGQLLKQAGL 438

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
             ST+EA R+++   +KI+ + +S++ L++   +F       +  GK+      L 
Sbjct: 439 VPSTSEALRNIEQGGVKIDGATVSDKALKVDAGEF------VVQVGKRRFARVTLT 488


>gi|297172660|gb|ADI23628.1| tyrosyl-tRNA synthetase [uncultured gamma proteobacterium
           HF4000_06A21]
          Length = 401

 Score =  404 bits (1038), Expect = e-110,   Method: Composition-based stats.
 Identities = 102/414 (24%), Positives = 181/414 (43%), Gaps = 25/414 (6%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
               L  RG + +I    EL      G  +    G+D TA  LH GH   +  +   Q  
Sbjct: 9   VFEELQ-RG-VEEILVEDELKERLRSGRPLRVKTGFDPTAPDLHIGHTVLVNKMRQFQTF 66

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+ + L+G  T +IGDPS ++ +R  +  Q+I+EN    +      +          + 
Sbjct: 67  GHEVVFLIGDFTGLIGDPSGKNATRPPLSRQQIEENAATYEEQVFKILDRD----QTRIE 122

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
            N  W  ++    ++R      +V RML  +    R +  + +S  EF Y ++Q YD V 
Sbjct: 123 FNSKWGNALGAEGMIRLAARH-TVARMLERDDFSRRYQNGEPISIHEFLYPLMQGYDSVV 181

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAI 245
           L    +  +++GG+DQ  N++ G +L ++        LT PLL    G  KM K+L  AI
Sbjct: 182 L----EADVELGGTDQKFNLLVGRELQKQYGQKPQVVLTMPLLEGLDGVQKMSKSLGNAI 237

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIA 303
            + +    P   +    +I D  +  + + L+   + EI   R +  +G    + K  +A
Sbjct: 238 GITEP---PAEMFGKLMSISDDLMWRYFELLSFRSVVEIRALRRSTEEGANPRDVKYELA 294

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
            EI T  H +  A++A  A ++ F   +  + +  + +  D    GM +  ++  AG   
Sbjct: 295 LEIVTRFHSKSSADRAKQAFVDRFQKGVLPEDLQEVDV--DSKGEGMSVTHVMRAAGLVA 352

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           ST+E  R +   A++I+   +S+  LQ+          + +  GK+     +L 
Sbjct: 353 STSEGLRLIDQGAVRIDGERVSDRALQLP-----RGSRVVVRVGKRKLARINLT 401


>gi|256370627|ref|YP_003108452.1| tyrosyl-tRNA synthetase [Candidatus Sulcia muelleri SMDSEM]
 gi|256009419|gb|ACU52779.1| tyrosyl-tRNA synthetase [Candidatus Sulcia muelleri SMDSEM]
          Length = 427

 Score =  404 bits (1038), Expect = e-110,   Method: Composition-based stats.
 Identities = 153/426 (35%), Positives = 236/426 (55%), Gaps = 26/426 (6%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +     RG IH  +  +++        +T Y G+D T+ SLH G+L  +++L   +++
Sbjct: 2   NLIQEFLWRGLIHNTTYSKKIK----NEKITLYTGFDPTSKSLHIGNLVAIIMLIHFKRS 57

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           G+K IS++GGGT +IGDPS ++  R +++ + +Q+NI+ IK   S F+ + + +    +L
Sbjct: 58  GNKIISVIGGGTGMIGDPSGKNSERIIIKKESLQKNIKNIKKQLSFFLDFNSNE----IL 113

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL    +ID  ++IG +F +N MLS +S++ R+ ++ S+SF EF Y +LQAYDF+ 
Sbjct: 114 NNYEWLKKTLFIDFAKDIGKYFPINYMLSKDSIKKRISKKNSISFTEFTYQLLQAYDFLY 173

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG-AI 245
           L K  +C LQ+GGSDQWGNI  GI+L  +    K+  LT PL+T   G+K GKT  G  I
Sbjct: 174 LYKKKNCSLQIGGSDQWGNITSGIELIRKKLGIKVNGLTFPLITKLDGSKFGKTEKGDNI 233

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN--EAKKIIA 303
           W++  +TSPY F+Q+W NI D     + K  T L   EI  +     K  N    +K IA
Sbjct: 234 WIDPNLTSPYEFYQFWINISDDQAKKYIKIYTFLKKEEIKEIIFFHEKNPNLKLIQKKIA 293

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHS------------QHMPTISISKDEVSRGMG 351
           +EIT  VHG++  EK    +   F                  +++P  ++  D ++  + 
Sbjct: 294 SEITIFVHGKKIFEKIKFISNILFKKEKILTNLSKNDIKSIYENIPHKNLFID-INFKIP 352

Query: 352 LLTLIV-KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
           +L L+V K+ F  S  EA RHLK N+I IN  II  E   +K +D  S   + L  GKKN
Sbjct: 353 ILDLLVNKSNFIKSKKEAIRHLKCNSILINKKIIK-ENFFLKKKDLISESYVLLQKGKKN 411

Query: 411 HIICHL 416
             +   
Sbjct: 412 FFMIKF 417


>gi|113971215|ref|YP_735008.1| tyrosyl-tRNA synthetase [Shewanella sp. MR-4]
 gi|113885899|gb|ABI39951.1| tyrosyl-tRNA synthetase [Shewanella sp. MR-4]
          Length = 408

 Score =  404 bits (1038), Expect = e-110,   Method: Composition-based stats.
 Identities = 100/422 (23%), Positives = 186/422 (44%), Gaps = 25/422 (5%)

Query: 1   MPAFKSDFLSILSE--RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLM 58
           +PA  +D   +L+E  RG    +     L+ L     +   +G D TA  +H GH   L 
Sbjct: 7   VPAEMADLDQVLAEIRRGTDEILLESDLLEKLKEGRPLRIKLGADPTAPDIHLGHTVILN 66

Query: 59  LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT 118
            L   Q+ GH+ I L+G  T ++GDPS ++ +R  +  +++  N E  K      +    
Sbjct: 67  KLRLFQELGHEVIFLIGDFTGMVGDPSGKNSTRPPLTREQVLANAETYKEQVYKILDPAK 126

Query: 119 GKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMI 178
            +    +  N +WL  +    ++R + S  +V RM+  +  + R    QS++  EF Y +
Sbjct: 127 TR----IEFNSSWLEPLGAAGMIR-LASQQTVARMMERDDFKKRYASGQSIAIHEFMYPL 181

Query: 179 LQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KM 237
           LQ YD V L  +    +++GG+DQ  N++ G +L +         +  PLL    G  KM
Sbjct: 182 LQGYDSVALKAD----VELGGTDQKFNLLMGRELQKAEGQKPQAVIMMPLLEGLDGVKKM 237

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEI 295
            K+    I +++        +    +I D  +  + + L+  P++EI++  +    G   
Sbjct: 238 SKSAHNYIGVSEPAN---EMFGKIMSISDELMWRYFELLSFRPLAEIEQFKQDIANGANP 294

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTL 355
            + K  +A EI    H +  AE A  A ++ F        +P + ++  E   G+ +  L
Sbjct: 295 RDTKIALAKEIIARFHDQAAAESAHQAFIDRFQKGAIPDDIPEVELAAGE---GLAIANL 351

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +  A    ST++A R +K +A+K++   + + ++ +               GK+      
Sbjct: 352 LKDADLVGSTSDAMRMIKQSAVKMDGEKVDDSRMTLSA-----GTVAVFQVGKRKFAKVT 406

Query: 416 LC 417
           L 
Sbjct: 407 LV 408


>gi|254490120|ref|ZP_05103312.1| tyrosyl-tRNA synthetase [Methylophaga thiooxidans DMS010]
 gi|224464708|gb|EEF80965.1| tyrosyl-tRNA synthetase [Methylophaga thiooxydans DMS010]
          Length = 399

 Score =  404 bits (1038), Expect = e-110,   Method: Composition-based stats.
 Identities = 100/403 (24%), Positives = 179/403 (44%), Gaps = 22/403 (5%)

Query: 15  RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLM 74
           RG    +     ++ L S   +    G+D TA  LH GH   L  L   Q  GH  + L+
Sbjct: 13  RGAEEILVESELVEKLESGRPLRIKAGFDPTAPDLHLGHTVLLNKLKQFQDLGHHILFLI 72

Query: 75  GGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCS 134
           G  T +IGDP+ ++ +R+ +   ++++N    +      +     +    ++ N  W+  
Sbjct: 73  GDFTGMIGDPTGKNVTRKPLTPDQVKQNAVTYQEQVFKILDREKTE----VVFNSHWMND 128

Query: 135 IKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCR 194
           +   D++R + S  +V RML  +    R    Q ++  EF Y ++Q YD VEL  +    
Sbjct: 129 MSSADMIR-LASNHTVARMLERDDFHKRYTSNQPIAIHEFLYPLIQGYDSVELNAD---- 183

Query: 195 LQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTS 253
           +++GG+DQ  N++ G +L +         LT P+L    G  KM K+L+  I +N    S
Sbjct: 184 VELGGTDQKFNLLMGRELQKAYGKAPQCILTMPILEGLDGVQKMSKSLNNYIGIN---DS 240

Query: 254 PYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATEITTMVH 311
           P + +    +I D  +  + + L+   + EI++  +   QG+   E KK  A EI    H
Sbjct: 241 PKDIFGKLMSISDDLMWRYIELLSFRNIKEIEQWRQDVEQGRNPIEIKKDFAEEIVARFH 300

Query: 312 GREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRH 371
             +    A       F        +P ++++      GM +  ++ +AG ++ST++A R 
Sbjct: 301 DEQAGTDARQGFENQFKKGELPDDIPEVTLTVG--VEGMAIANVLKEAGLSSSTSDAMRM 358

Query: 372 LKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +K  A KI+   I+++ L I               GK+     
Sbjct: 359 IKQGAAKIDGEKITDKSLLIAA-----GVEGIFQVGKRKFAKI 396


>gi|253701885|ref|YP_003023074.1| tyrosyl-tRNA synthetase [Geobacter sp. M21]
 gi|251776735|gb|ACT19316.1| tyrosyl-tRNA synthetase [Geobacter sp. M21]
          Length = 403

 Score =  404 bits (1038), Expect = e-110,   Method: Composition-based stats.
 Identities = 106/422 (25%), Positives = 184/422 (43%), Gaps = 30/422 (7%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLML 59
           M   K   + IL E+  +       +L+     G  +    G+D TA  LH GH   L  
Sbjct: 7   MEIIKRGAVEILVEKELV------EKLEKSVKTGVPLKIKAGFDPTAPDLHLGHTVLLHK 60

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG 119
           +   QK GH+   L+G  T +IGDP+ + E+R+++  +++ +N E  K      +     
Sbjct: 61  MRQFQKLGHEVHFLIGDFTGMIGDPTGKSETRKVLTREDVLKNAETYKEQVFKILDPKLT 120

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
           K    ++ N  WL  +   D++  + S ++V RML  E   +R   +  +S  EF Y ++
Sbjct: 121 K----VVFNSEWLGKLSASDMIG-LASKYTVARMLEREDFSNRFSNQLPISIHEFMYPLV 175

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMG 238
           Q YD V L  +    +++GG+DQ  N++ G +L           +T PLL    G  KM 
Sbjct: 176 QGYDSVALKAD----VELGGTDQKFNLLVGRELQREWGQAPQCVITMPLLEGLDGVNKMS 231

Query: 239 KTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EI 295
           K+L   I +N+        +    +I D  +V + + L+ L + E +++           
Sbjct: 232 KSLGNYIGINEPAD---EIYGKIMSISDELMVRYYELLSDLTIVEFEKLKADLKSGAIHP 288

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTL 355
            EAKK +A E+    HG E A  A    ++ F  +     MP   +  +     + L  +
Sbjct: 289 MEAKKQLAREMVGRYHGAEAATIADENFVKRFKNNETPDDMPEFILKAE--GERVLLCKV 346

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           + +A    S +E RR ++   +KIN   +++E L+I        G   +  GK+      
Sbjct: 347 LAEAQLTKSNSEGRRSIQGGGVKINGEKVADENLEIAC-----VGEYVIQVGKRRFAKVR 401

Query: 416 LC 417
             
Sbjct: 402 FV 403


>gi|117921496|ref|YP_870688.1| tyrosyl-tRNA synthetase [Shewanella sp. ANA-3]
 gi|117613828|gb|ABK49282.1| tyrosyl-tRNA synthetase [Shewanella sp. ANA-3]
          Length = 398

 Score =  403 bits (1037), Expect = e-110,   Method: Composition-based stats.
 Identities = 98/417 (23%), Positives = 182/417 (43%), Gaps = 25/417 (5%)

Query: 6   SDFLSILSE--RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           +D   +L+E  RG    +     L+ L     +   +G D TA  +H GH   L  L   
Sbjct: 2   ADLDQVLAEIRRGTDEILLESDLLEKLKEGRPLRIKLGADPTAPDIHLGHTVILNKLRLF 61

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q+ GH+ I L+G  T ++GDPS ++ +R  +  +++  N E  K      +     +   
Sbjct: 62  QELGHEVIFLIGDFTGMVGDPSGKNSTRPPLTREQVLANAETYKEQVYKILDPAKTR--- 118

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            +  N +WL  +    ++R + S  +V RM+  +  + R    QS++  EF Y +LQ YD
Sbjct: 119 -IEFNSSWLEPLGAAGMIR-LASQQTVARMMERDDFKKRYASGQSIAIHEFMYPLLQGYD 176

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLS 242
            V L  +    +++GG+DQ  N++ G +L +         +  PLL    G  KM K+  
Sbjct: 177 SVALKAD----VELGGTDQKFNLLMGRELQKAEGQKPQAVIMMPLLEGLDGVKKMSKSAH 232

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKK 300
             I +++        +    +I D  +  + + L+  P++EI++  +    G    + K 
Sbjct: 233 NYIGVSEPTN---EMFGKIMSISDELMWRYFELLSFRPLAEIEQFKQDIANGANPRDTKI 289

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
            +A EI    H +  AE A  A ++ F        +P + ++  E   G+ +  L+  A 
Sbjct: 290 ALAKEIIARFHDQAAAESAHQAFIDRFQKGAIPDDIPEVELAAGE---GLAIANLLKDAD 346

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
              ST++A R +K  A+K++   + + ++ +               GK+      L 
Sbjct: 347 LVGSTSDAMRMIKQGAVKMDGEKVDDSRMTLSA-----GTVAVFQVGKRKFAKVTLV 398


>gi|149019700|gb|EDL77848.1| tyrosyl-tRNA synthetase 2 (mitochondrial) [Rattus norvegicus]
          Length = 478

 Score =  403 bits (1037), Expect = e-110,   Method: Composition-based stats.
 Identities = 134/431 (31%), Positives = 208/431 (48%), Gaps = 28/431 (6%)

Query: 13  SERGFIHQISNP----RELDILCSQG----VVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
             RG   +         EL  L  +       T Y G+D T  SLH GHL  L+ LF  Q
Sbjct: 44  RARGLFKEFFPESGTKTELPELFDRRRAGSPQTVYCGFDPTGDSLHVGHLLTLLGLFHFQ 103

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI-------EKIKGIFSSFIKYG 117
           + GH  I+L+GG T+++GDPS R + R  + ++ ++ N        E +    +     G
Sbjct: 104 RAGHNVIALVGGSTALLGDPSGRTKEREALSAECVRANARALQRGLETLAANHARLFADG 163

Query: 118 TGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYM 177
                  +L+N  W      +D L  +G  F +  +LS  SV+SRLK  + +S  EF Y 
Sbjct: 164 RPWGTFTVLDNAAWFQKQHLMDFLATVGGHFRMGTLLSRLSVQSRLKSPEGMSLAEFFYQ 223

Query: 178 ILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
           +LQAYDF  L ++Y CR+Q+GGSDQ GNI+ G +   +L    +F +T PL+T+ +G K+
Sbjct: 224 VLQAYDFYYLFRHYGCRVQLGGSDQLGNIMSGYEFIHKLTGEDVFGITVPLITSTTGAKL 283

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI-- 295
           GK+   A+WLN+E TSP+  +Q++    D  V  + K  T LP+ EID + +L  KE   
Sbjct: 284 GKSAGNAVWLNREKTSPFELYQFFIRQQDDSVERYLKLFTFLPLPEIDHIMQLHVKEPEK 343

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM----------PTISISKDE 345
             A+K +A E+T +VHG+E  + A       +  SI +  +             S S+  
Sbjct: 344 RIAQKRLAAEVTKLVHGQEGLDSAKRCTQALYHSSIEALEVMSDQELKELFKEASFSELV 403

Query: 346 VSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL-QDFDSTGNIKL 404
           +  G  ++    KA          R +    + IN+  ++N +  + + Q     G   L
Sbjct: 404 LDPGTSVIDTCRKANAIPDGPRGYRMITEGGVSINHRQVTNPESVLVIGQHILKNGLSLL 463

Query: 405 SFGKKNHIICH 415
             GK+N  I  
Sbjct: 464 KIGKRNFYIIK 474


>gi|86742625|ref|YP_483025.1| tyrosyl-tRNA synthetase [Frankia sp. CcI3]
 gi|86569487|gb|ABD13296.1| tyrosyl-tRNA synthetase [Frankia sp. CcI3]
          Length = 428

 Score =  403 bits (1037), Expect = e-110,   Method: Composition-based stats.
 Identities = 131/425 (30%), Positives = 214/425 (50%), Gaps = 16/425 (3%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  LS RG +H  ++P EL      G    YIG+D TA SL  G+L  + LL    + G
Sbjct: 5   LLDELSWRGLLHDSTDPAELREHLDSGRRRCYIGFDPTAPSLTIGNLLPMTLLIRAARAG 64

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSS-FIKYGTGKTDALML 126
              ++L GGGT +IGDPS +   R ++ +QE++ N+   + I  S F +          +
Sbjct: 65  IGAVTLFGGGTGLIGDPSGKSVERSLLTAQEVRTNMLGQQEIMESVFARALDSGQLPQFV 124

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYDFV 185
           +N  WL  +  I+ LR++G  F V  M+  +SVR RL      L++ EF+Y +LQAYDF 
Sbjct: 125 DNADWLDGLGMIEFLRDVGKHFPVTEMVRRDSVRRRLDDPDVGLTYTEFSYSLLQAYDFR 184

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L +++   LQMG SDQWGNI+ GID   R+   ++  LT PLL  + GTK GK+  GA+
Sbjct: 185 RLCEDHGVTLQMGASDQWGNIVAGIDYVRRVLRTQVHGLTCPLLLRSDGTKFGKSEKGAV 244

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIA 303
           WL+ + TSPY  +Q+  N+ D +   FA   + +    ++R+     +       ++ +A
Sbjct: 245 WLSADRTSPYTLYQFVINLSDDEARRFALFFSLIDREPLERLFAEHAEAPGKRALQRHLA 304

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVS-RGMGL 352
            EIT +VHG+   + A  A+   F   + +            +PT+      +   G  +
Sbjct: 305 REITALVHGQAAVDAAEAASAALFSGDVKAIGADLLSDVFADVPTVEEPAARLEDDGWPV 364

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           + L++  G A+S  +AR HL ++A+ +N   +   +  +  +D      I +  G++   
Sbjct: 365 VDLLIATGLASSKRDAREHLGNHAVLVNGERV-GVEATVGTKDLLHGSVILVRRGRREWR 423

Query: 413 ICHLC 417
           +    
Sbjct: 424 VARFT 428


>gi|332142558|ref|YP_004428296.1| tyrosyl-tRNA synthetase [Alteromonas macleodii str. 'Deep ecotype']
 gi|327552580|gb|AEA99298.1| tyrosyl-tRNA synthetase [Alteromonas macleodii str. 'Deep ecotype']
          Length = 399

 Score =  403 bits (1036), Expect = e-110,   Method: Composition-based stats.
 Identities = 96/406 (23%), Positives = 181/406 (44%), Gaps = 22/406 (5%)

Query: 15  RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLM 74
           RG    +     ++ L S   +T   G+D TA  LH GH   +  L   Q+ GHK + L+
Sbjct: 13  RGVDEILPEEDLIEKLKSGKTLTIKAGFDPTAPDLHLGHTVLINKLRTFQQLGHKVVFLI 72

Query: 75  GGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCS 134
           G  T +IGDP+ ++ +R+ +  +++ EN +  +      +     +    +  N  W+  
Sbjct: 73  GDFTGLIGDPTGKNVTRKPLSKEQVLENAKTYQEQVFKILD----EEKTEIRFNSEWMDG 128

Query: 135 IKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCR 194
           +    +++ + +  +V RML  +  + R    Q ++  EF Y ++Q +D V L  +    
Sbjct: 129 LGAAGMIK-LAASQTVARMLERDDFKKRYNNGQPIAIHEFLYPLVQGWDSVALESD---- 183

Query: 195 LQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTS 253
           +++GG+DQ  N++ G +L +     +   +  PLL    G  KM K+L+  I +     +
Sbjct: 184 VELGGTDQRFNLLMGRELQKEQGQKQQSIVMVPLLEGLDGVQKMSKSLNNYIGIT---DT 240

Query: 254 PYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATEITTMVH 311
           P   +    +I D  +  +   ++  P+ EI  +      G+   + K ++A EI    H
Sbjct: 241 PNEMFGKVMSISDDLMWRYYDLVSFRPLEEIAELKARVEGGENPRDIKIMLAKEIIARFH 300

Query: 312 GREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRH 371
               AE A    ++ F  +     MP + I+  +   G+ +  L+ +A    ST++A R 
Sbjct: 301 DDAAAEGAHQDFIQRFQKNAIPDDMPELEIALSD--EGIAIGNLLKEAKLVGSTSDAMRM 358

Query: 372 LKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           +K  A+KIN   + + +L I  +     G      GK+      L 
Sbjct: 359 IKQGAVKINGDKVEDTRLVITEK-----GENVYQVGKRKFARITLA 399


>gi|148269582|ref|YP_001244042.1| tyrosyl-tRNA synthetase [Thermotoga petrophila RKU-1]
 gi|281411699|ref|YP_003345778.1| tyrosyl-tRNA synthetase [Thermotoga naphthophila RKU-10]
 gi|147735126|gb|ABQ46466.1| tyrosyl-tRNA synthetase [Thermotoga petrophila RKU-1]
 gi|281372802|gb|ADA66364.1| tyrosyl-tRNA synthetase [Thermotoga naphthophila RKU-10]
          Length = 401

 Score =  403 bits (1036), Expect = e-110,   Method: Composition-based stats.
 Identities = 104/410 (25%), Positives = 183/410 (44%), Gaps = 27/410 (6%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           + IL  R  +  +S    LD +  +G +   +G D +   LH GH   L  L   Q  GH
Sbjct: 7   VKILK-RNVVDFVSEEELLDRIKRKGKLRVKLGVDPSRPDLHLGHAVVLRKLREFQDLGH 65

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
             + ++G  T+ IGDPS R+E+R M+  +E+ EN +  +      +     +    +  N
Sbjct: 66  TVVLIIGDFTARIGDPSGRNETRPMLTREEVLENAKTYQEQAFKILDPERTE----LRFN 121

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL  + + D++  + S ++V RML  +    R K    ++  EF Y + QAYD V + 
Sbjct: 122 GEWLDRMTFADVI-VLASKYTVARMLERDDFAKRFKEGIPITISEFLYPLAQAYDSVAIQ 180

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWL 247
            +    +++GG+DQ  N++ G  + E         +T P++    G  KM K+    I  
Sbjct: 181 AD----VELGGTDQLFNLLVGRKIQEEYGQEPQIVMTMPIIEGTDGKLKMSKSYGNYIAF 236

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAKKIIAT 304
           N     P   +    +I D  ++ + + LT +P   I+   +   +      + K ++A 
Sbjct: 237 N---DPPEEMYGKLMSIPDELIIKYMRLLTDVPEERIEEYERKMKEKTINPRDVKMVLAY 293

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           EIT   HG E A+KA    ++ F        MP + IS+++      ++ L+V+ G  +S
Sbjct: 294 EITRFFHGEENAKKAQEQFVKVFQKKEIPDEMPIVEISQEK-----NIVDLLVEIGAVSS 348

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +EA+R +    + I+   I + K  +K       G   L  GK+     
Sbjct: 349 KSEAKRLVAQGGVYIDGERIEDIKFTVKP-----VGEQVLKVGKRKFYRI 393


>gi|17545215|ref|NP_518617.1| tyrosyl-tRNA synthetase [Ralstonia solanacearum GMI1000]
 gi|81506509|sp|Q8Y240|SYY_RALSO RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|17427506|emb|CAD14024.1| probable tyrosyl-trna synthetase protein [Ralstonia solanacearum
           GMI1000]
          Length = 392

 Score =  403 bits (1036), Expect = e-110,   Method: Composition-based stats.
 Identities = 102/414 (24%), Positives = 187/414 (45%), Gaps = 30/414 (7%)

Query: 11  ILSERG----FIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
            +++RG     I      +      +   +   +G D TA  +H GH   L  +  LQ  
Sbjct: 2   EVTQRGCDELLIAAEWEQKLARSAATGVPLRIKLGLDPTAPDIHIGHTVVLNKMRQLQDL 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+ I L+G  TS IGDPS R+ +R  +  ++I+ N +      S  +     +    + 
Sbjct: 62  GHQVIFLIGDFTSTIGDPSGRNATRPPLTREQIEANAQTYYRQASMVLDPSKTE----IR 117

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
            N  W   +    ++ ++ + ++V RM+  +    R K    +S  EF Y ++Q YD V 
Sbjct: 118 YNSEWCDPLGARGII-QLAAKYTVARMMERDDFTKRYKAGVPISVHEFLYPLMQGYDSVA 176

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAI 245
           L  +    L++GG+DQ  N++ G +L +         LT PLL    G  KM K+    +
Sbjct: 177 LKSD----LELGGTDQKFNLLVGRELQKEYGQEPQCILTMPLLVGLDGVEKMSKSKGNYV 232

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKKIIA 303
            +++   +P   +    +I D  + ++   L+  P++EID M +    G+   + K ++A
Sbjct: 233 GISE---APNEMFGKLMSISDDLMWTYYTLLSFRPLAEIDLMKQEVTLGRNPRDCKVLLA 289

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
            EI    H + +AE+A                +P I +S       +G+  L+ +AG   
Sbjct: 290 QEIIARFHSQADAERALEDF-NHRARGGVPDDIPQIELS----GAPIGIAQLLKQAGLCP 344

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           ST+EA R+++   +KI+ ++IS++ L+++       G   +  GK+      L 
Sbjct: 345 STSEANRNIEQGGVKIDGTVISDKGLKVEA------GTFVMQVGKRRFARVVLS 392


>gi|219871769|ref|YP_002476144.1| tyrosyl-tRNA synthetase [Haemophilus parasuis SH0165]
 gi|219691973|gb|ACL33196.1| tyrosyl-tRNA synthetase [Haemophilus parasuis SH0165]
          Length = 396

 Score =  403 bits (1036), Expect = e-110,   Method: Composition-based stats.
 Identities = 105/419 (25%), Positives = 179/419 (42%), Gaps = 27/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M       L+ L  RG     S    ++ L     +   +G D TA  +H GH   L  L
Sbjct: 1   MTQSIETILAELK-RGVEDVYSEADLIEKLKENRPLRVKLGADPTAPDIHLGHTVVLNKL 59

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GH+ I L+G  T+ +GDPS ++ +R  +  +++  N E  K      +     +
Sbjct: 60  RQFQNFGHEVIFLIGDFTATVGDPSGKNTTRPPLSREDVLRNAETYKEQIYKILDPQKTR 119

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               ++ N  WL  +  + ++R + S ++V RML  +  + R    QS++  EF Y +LQ
Sbjct: 120 ----IVFNSDWLGELGTVGMIR-LASNYTVARMLERDDFKKRFANNQSIAIHEFIYPLLQ 174

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGK 239
            +D V L    +  +++GG+DQ  N++ G +L +        A+T PLL    G  KM K
Sbjct: 175 GHDSVAL----EADIELGGTDQTFNLLIGRELQKAAGQKLQVAMTLPLLVGLDGEKKMSK 230

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINE 297
           +L   I + +    P   +    +I D  +  +   L+  P++EI ++      GK   +
Sbjct: 231 SLGNYIGVTE---VPNEMFGKIMSISDELMWDWYNLLSFRPLTEIAQLKADVEAGKNPRD 287

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A EI    H   +A+ A    +  F        MP  +         +GL TL+ 
Sbjct: 288 VKILLAKEIIARFHSEADADAAEQEFINRFQKGAMPDEMPEFT-----FEGEIGLATLLK 342

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +AG   ST+EA R  +   +KI+   + + K           G      GK+      +
Sbjct: 343 EAGLVPSTSEAIRSAQQGGVKIDGEKVDDVKQN------AQKGTFVYQVGKRKFARVTV 395


>gi|197117360|ref|YP_002137787.1| tyrosyl-tRNA synthetase [Geobacter bemidjiensis Bem]
 gi|197086720|gb|ACH37991.1| tyrosyl-tRNA synthetase [Geobacter bemidjiensis Bem]
          Length = 403

 Score =  403 bits (1036), Expect = e-110,   Method: Composition-based stats.
 Identities = 106/422 (25%), Positives = 187/422 (44%), Gaps = 30/422 (7%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLML 59
           M   K   + IL E+  +       +L+     G  +    G+D TA  LH GH   L  
Sbjct: 7   MEIIKRGAVEILVEKELV------EKLEKSVKTGVPLKIKAGFDPTAPDLHLGHTVLLHK 60

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG 119
           +   QK GH+   L+G  T +IGDP+ + E+R+++  +++ +N E  K      +     
Sbjct: 61  MRQFQKLGHEVHFLIGDFTGMIGDPTGKSETRKVLTREDVLKNAETYKEQVFKILDPKLT 120

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
           K    ++ N  WL  +   D++  + S ++V RML  E   +R   +  +S  EF Y ++
Sbjct: 121 K----VVFNSEWLGKLSASDMIG-LASKYTVARMLEREDFSNRFSNQLPISIHEFMYPLV 175

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMG 238
           Q YD V L  +    +++GG+DQ  N++ G +L           +T PLL    G  KM 
Sbjct: 176 QGYDSVALKAD----VELGGTDQKFNLLVGRELQREWGQAPQCVITMPLLEGLDGVNKMS 231

Query: 239 KTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEI 295
           K+L   I +N+        +    +I D  ++ + + L+ L + E +++    K      
Sbjct: 232 KSLGNYIGINEPAD---EIYGKIMSISDELMIRYYELLSDLTIVEFEKLKSDLKDGAIHP 288

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTL 355
            EAKK +A E+    HG E A  A    ++ F  +   + MP  ++  +     + L  +
Sbjct: 289 MEAKKQLAREMVGRYHGVEAATLADENFVKRFKNNETPEDMPEFTLKAE--GEKVLLCKV 346

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           + +A    S +E RR ++   +K+N   +S+E L+I        G   +  GK+      
Sbjct: 347 LAEAQLTKSNSEGRRSIQGGGVKVNGDKVSDENLEIAC-----VGEYVIQVGKRRFAKVR 401

Query: 416 LC 417
             
Sbjct: 402 FA 403


>gi|15602620|ref|NP_245692.1| tyrosyl-tRNA synthetase [Pasteurella multocida subsp. multocida
           str. Pm70]
 gi|81637009|sp|Q9CMQ8|SYY_PASMU RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|12721053|gb|AAK02839.1| TyrS [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 395

 Score =  403 bits (1036), Expect = e-110,   Method: Composition-based stats.
 Identities = 107/419 (25%), Positives = 184/419 (43%), Gaps = 28/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M    +  L+ L  RG    +S    ++ L     +   +G D TA  +H GH   L  L
Sbjct: 1   MTEINT-VLAELK-RGVDEILSEADLIEKLKENRPLRVKLGADPTAPDIHLGHTVVLNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+ I L+G  T ++GDPS ++ +R  +   ++  N E  K      +     +
Sbjct: 59  RQFQQFGHEVIFLIGDFTGMVGDPSGKNTTRPPLSRDDVLRNAETYKQQIYKILDPQKTR 118

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               ++ N +WL  +    ++R + S ++V RML  +  + R    Q ++  EF Y +LQ
Sbjct: 119 ----IVFNSSWLGELGTEGMIR-LTSNYTVARMLERDDFKKRFSNNQPIAIHEFIYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGK 239
            YD V L  +    +++GG+DQ  N++ G +L +        A+T PLL    G  KM K
Sbjct: 174 GYDSVALDAD----IELGGTDQKFNLLVGRELQKSAGQKPQVAITLPLLVGLDGEKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINE 297
           +L   I + +   SP   +    +I D  +  +   L+  P++EI   +     G+   +
Sbjct: 230 SLGNYIGVAE---SPTEMFGKVMSISDELMWDWYDLLSFRPLTEIAQLKQEVENGRNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A E+    H   +AE A    +  F      + MP ++         MGL  L+ 
Sbjct: 287 IKVLLAKELIARFHSEADAEAAEQEFINRFQKGAMPEDMPELT-----FEGEMGLANLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +AG   ST+EA R ++   +KI+   + + KL IK              GK+      +
Sbjct: 342 EAGLVASTSEANRMVQQGGVKIDGEKVEDAKLVIKAS------TAVYQVGKRKFARVTV 394


>gi|195429808|ref|XP_002062949.1| GK21649 [Drosophila willistoni]
 gi|194159034|gb|EDW73935.1| GK21649 [Drosophila willistoni]
          Length = 466

 Score =  403 bits (1036), Expect = e-110,   Method: Composition-based stats.
 Identities = 131/442 (29%), Positives = 219/442 (49%), Gaps = 37/442 (8%)

Query: 6   SDFLSILSERGFIHQISNPRE---LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
            + L  L++RGF   I        +  L + G  + Y G+D TA SLH G+L  +M L  
Sbjct: 28  KNLLE-LTDRGFFQSIFPDTAAPRMKHLFTSGRQSIYAGFDPTADSLHVGNLLVIMGLLH 86

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK------Y 116
            Q+ GHKPI+L+GG T +IGDPS R   R  +    I+ N++ I+       K      +
Sbjct: 87  CQRAGHKPIALVGGATGLIGDPSGRKTERNQLGESVIETNLKAIEQQLLRVFKNHEDCLW 146

Query: 117 GTGKTDAL-----MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSF 171
            T K  +      ++NN  W  ++  ++ +  +G  F +  MLS  SV+SRL+ E  +SF
Sbjct: 147 DTKKNKSPLAPLTIVNNAEWYANLHLVEFIANMGRHFRMGSMLSRSSVQSRLESEDGMSF 206

Query: 172 LEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLLT 230
            EF Y I QAYD++ L + ++C  QMGGSDQ GN++ G +L  R++   ++F LT P++T
Sbjct: 207 TEFTYQIFQAYDWLHLLQKHNCCFQMGGSDQMGNLMTGHELISRVERKREVFGLTLPIVT 266

Query: 231 TASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL 290
              G K GK+   A+WL+ E TSP+  +Q++  + D++V    K  T +P+ E++++ + 
Sbjct: 267 NEEGDKFGKSAGNAVWLDPEKTSPFALYQFFLRMPDSEVEKLLKLFTFIPLPEVEQLIRE 326

Query: 291 QGKEI--NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV-- 346
             KE    +A+ ++A ++T +VHG    ++A       +  ++ +       ++  E+  
Sbjct: 327 HQKEPEKRKAQTLLAEDVTLLVHGENGLKQAERVTNALYKGNVEA----LAELNYAEIKQ 382

Query: 347 ------------SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
                         GM +L L +KA    + N+A R + +    +N   + N    I   
Sbjct: 383 TLQGAILVDMLKESGMSILQLALKAKCFPTENDAVRIINAGGFYVNQKRVQNIAEVITTG 442

Query: 395 -DFDSTGNIKLSFGKKNHIICH 415
                     L  GK+N  I  
Sbjct: 443 VHILRNDISLLRVGKRNFYIIR 464


>gi|57528201|ref|NP_001009627.1| tyrosyl-tRNA synthetase, mitochondrial precursor [Rattus
           norvegicus]
 gi|81883008|sp|Q5I0L3|SYYM_RAT RecName: Full=Tyrosyl-tRNA synthetase, mitochondrial; AltName:
           Full=Tyrosine--tRNA ligase; Short=TyrRS; Flags:
           Precursor
 gi|56972089|gb|AAH88224.1| Tyrosyl-tRNA synthetase 2 (mitochondrial) [Rattus norvegicus]
          Length = 471

 Score =  403 bits (1036), Expect = e-110,   Method: Composition-based stats.
 Identities = 134/431 (31%), Positives = 208/431 (48%), Gaps = 28/431 (6%)

Query: 13  SERGFIHQISNP----RELDILCSQG----VVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
             RG   +         EL  L  +       T Y G+D T  SLH GHL  L+ LF  Q
Sbjct: 37  RARGLFKEFFPESGTKTELPELFDRRRAGSPQTVYCGFDPTGDSLHVGHLLTLLGLFHFQ 96

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI-------EKIKGIFSSFIKYG 117
           + GH  I+L+GG T+++GDPS R + R  + ++ ++ N        E +    +     G
Sbjct: 97  RAGHNVIALVGGSTALLGDPSGRTKEREALSAECVRANARALQRGLETLAANHARLFADG 156

Query: 118 TGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYM 177
                  +L+N  W      +D L  +G  F +  +LS  SV+SRLK  + +S  EF Y 
Sbjct: 157 RPWGTFTVLDNAAWFQKQHLMDFLATVGGHFRMGTLLSRLSVQSRLKSPEGMSLAEFFYQ 216

Query: 178 ILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
           +LQAYDF  L ++Y CR+Q+GGSDQ GNI+ G +   +L    +F +T PL+T+ +G K+
Sbjct: 217 VLQAYDFYYLFRHYGCRVQLGGSDQLGNIMSGYEFIHKLTGEDVFGITVPLITSTTGAKL 276

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI-- 295
           GK+   A+WLN+E TSP+  +Q++    D  V  + K  T LP+ EID + +L  KE   
Sbjct: 277 GKSAGNAVWLNREKTSPFELYQFFIRQQDDSVERYLKLFTFLPLPEIDHIMQLHVKEPEK 336

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM----------PTISISKDE 345
             A+K +A E+T +VHG+E  + A       +  SI +  +             S S+  
Sbjct: 337 RIAQKRLAAEVTKLVHGQEGLDSAKRCTQALYHSSIEALEVMSDQELKELFKEASFSELV 396

Query: 346 VSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL-QDFDSTGNIKL 404
           +  G  ++    KA          R +    + IN+  ++N +  + + Q     G   L
Sbjct: 397 LDPGTSVIDTCRKANAIPDGPRGYRMITEGGVSINHRQVTNPESVLVIGQHILKNGLSLL 456

Query: 405 SFGKKNHIICH 415
             GK+N  I  
Sbjct: 457 KIGKRNFYIIK 467


>gi|217969658|ref|YP_002354892.1| tyrosyl-tRNA synthetase [Thauera sp. MZ1T]
 gi|217506985|gb|ACK53996.1| tyrosyl-tRNA synthetase [Thauera sp. MZ1T]
          Length = 399

 Score =  403 bits (1036), Expect = e-110,   Method: Composition-based stats.
 Identities = 90/420 (21%), Positives = 177/420 (42%), Gaps = 24/420 (5%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M   ++     L +RG    +     ++ L     +    G+D TA  LH GH   +  +
Sbjct: 1   MSDVQAAI--DLIKRGADAVLIEAELVEKLKRGKPLRVKAGFDPTAPDLHLGHTVLINKM 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+   L+G  T +IGDPS ++ +R  +  ++I EN    +      +     +
Sbjct: 59  RHFQELGHQVQFLIGDFTGMIGDPSGKNSTRPPLSREQILENARTYQEQVFKILDPEKTE 118

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N  W+  +    ++R + +  +V RML  +    R    Q ++  EF Y + Q
Sbjct: 119 ----ICFNSAWMNDLGAAGMIR-LAAQQTVARMLERDDFAKRYGNNQPIAIHEFLYPLCQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGK 239
            YD V +  +    +++GG+DQ  N++ G +L +         +  PLL    G  KM K
Sbjct: 174 GYDSVAMKAD----VELGGTDQRFNLLMGRELQKHYGQEPQCVVMVPLLEGLDGVNKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINE 297
           +L   I + +        +    ++ D  +  + + L+    +EI   R     G+   +
Sbjct: 230 SLGNYIGIAEPAK---EIFGKTMSVSDTLMWRYYELLSFRSSAEIAQLRADVEGGRNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A E     HG+  AE+A       F  +     +P ++++    + G+ L  ++ 
Sbjct: 287 VKVMLAMEFVARFHGQRAAEEALADFEARFQRNAIPDDIPQVNVNVG--AGGLPLFQVLK 344

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           +AG   +T+EA R ++   ++I+     ++ L ++         + L  GK+      L 
Sbjct: 345 QAGLTGTTSEAMRMVEQGGVRIDGERAEDKGLLLRA-----GETVVLQVGKRKFASVVLS 399


>gi|315634402|ref|ZP_07889689.1| tyrosine--tRNA ligase [Aggregatibacter segnis ATCC 33393]
 gi|315476992|gb|EFU67737.1| tyrosine--tRNA ligase [Aggregatibacter segnis ATCC 33393]
          Length = 395

 Score =  403 bits (1036), Expect = e-110,   Method: Composition-based stats.
 Identities = 104/419 (24%), Positives = 181/419 (43%), Gaps = 28/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M    +  L+ L  RG    +S    ++ L     +   +G D TA  +H GH   L  L
Sbjct: 1   MTDMNT-VLAELK-RGVDEILSEQDLIEKLKENRPLRVKLGADPTAPDIHLGHTVVLNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+   L+G  T ++GDPS ++ +R  +  +++  N E  K      +     +
Sbjct: 59  RQFQQLGHEVYFLIGDFTGMVGDPSGKNTTRPPLSREDVLRNAETYKQQIYKILDPQKTR 118

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               ++ N  WL  +    ++R + S ++V RML  +  + R    Q ++  EF Y +LQ
Sbjct: 119 ----IVFNSEWLGKLGTEGMIR-LASNYTVARMLERDDFKKRFSNNQPIAIHEFIYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGK 239
            +D V L    +  +++GG+DQ  N++ G +L +        A+T PLL    G  KM K
Sbjct: 174 GHDSVAL----EADVELGGTDQKFNLLVGRELQKSAGQKPQVAITLPLLVGLDGEKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINE 297
           +L   I + +   +P   +    +I D  +  +   L+  P++EI ++      GK   +
Sbjct: 230 SLGNYIGVTE---APSEMFGKIMSISDDLMWDWYNLLSFRPLAEIAQLKADVANGKNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A EI    H    AE A    +  F        MP  +   +     +GL  L+ 
Sbjct: 287 VKILLAKEIIARFHDDAAAEAAEQEFINRFQKGAMPDDMPEFTFESE-----IGLANLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +AG   ST+EA R ++   +KI+   + + KL I               GK+      +
Sbjct: 342 EAGLVASTSEANRMVQQGGVKIDGEKVEDAKLVISAS------TAVYQVGKRKFAKVTV 394


>gi|309779823|ref|ZP_07674578.1| tyrosine--tRNA ligase [Ralstonia sp. 5_7_47FAA]
 gi|308921400|gb|EFP67042.1| tyrosine--tRNA ligase [Ralstonia sp. 5_7_47FAA]
          Length = 427

 Score =  403 bits (1036), Expect = e-110,   Method: Composition-based stats.
 Identities = 99/397 (24%), Positives = 182/397 (45%), Gaps = 27/397 (6%)

Query: 24  PRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIG 82
            ++L    + G  +   +G D TA  +H GH   L  +  LQ  GH+ I L+G  TS IG
Sbjct: 53  EQKLAKSAATGVPLRIKLGLDPTAPDIHIGHTVVLNKMRQLQDLGHQVIFLIGDFTSTIG 112

Query: 83  DPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLR 142
           DPS R+ +R  +  ++I+ N +      S  +     +    +  N  W   +    ++ 
Sbjct: 113 DPSGRNATRPPLTREQIEANAQTYYRQASMVLDPSKTE----IRYNSEWCDPLGARGII- 167

Query: 143 EIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQ 202
           ++ + ++V RM+  +    R K    +S  EF Y ++Q YD V L  +    L++GG+DQ
Sbjct: 168 QLAAKYTVARMMERDDFTKRYKAGVPISVHEFLYPLMQGYDSVALKSD----LELGGTDQ 223

Query: 203 WGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYW 261
             N++ G +L +         LT PLL    G  KM K+    + +++   +P   +   
Sbjct: 224 KFNLLVGRELQKEYGQEPQCILTMPLLVGLDGVEKMSKSKGNYVGISE---APNEMFGKL 280

Query: 262 RNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEITTMVHGREEAEKA 319
            +I D  + ++   L+  P++EID  +     G+   + K ++A EI    H + +AE+A
Sbjct: 281 MSISDDLMWTYYTLLSFRPLAEIDLMKQEIALGRNPRDCKVMLAQEIVARFHSQADAERA 340

Query: 320 ATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKI 379
                           +P I +S       +G+  L+ +AG   ST++A R+++   +KI
Sbjct: 341 LEDF-NHRARGGVPDDIPQIELS----GAPLGIAQLLKQAGLCPSTSDANRNIEQGGVKI 395

Query: 380 NNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           + ++IS++ L++        G   +  GK+      L
Sbjct: 396 DGTVISDKGLKVDA------GTFVMQVGKRRFARVVL 426


>gi|187927475|ref|YP_001897962.1| tyrosyl-tRNA synthetase [Ralstonia pickettii 12J]
 gi|187724365|gb|ACD25530.1| tyrosyl-tRNA synthetase [Ralstonia pickettii 12J]
          Length = 421

 Score =  403 bits (1035), Expect = e-110,   Method: Composition-based stats.
 Identities = 99/397 (24%), Positives = 182/397 (45%), Gaps = 27/397 (6%)

Query: 24  PRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIG 82
            ++L    + G  +   +G D TA  +H GH   L  +  LQ  GH+ I L+G  TS IG
Sbjct: 47  EQKLAKSAATGVPLRIKLGLDPTAPDIHIGHTVVLNKMRQLQDLGHQVIFLIGDFTSTIG 106

Query: 83  DPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLR 142
           DPS R+ +R  +  ++I+ N +      S  +     +    +  N  W   +    ++ 
Sbjct: 107 DPSGRNATRPPLTREQIEANAQTYYRQASMVLDPSKTE----IRYNSEWCDPLGARGII- 161

Query: 143 EIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQ 202
           ++ + ++V RM+  +    R K    +S  EF Y ++Q YD V L  +    L++GG+DQ
Sbjct: 162 QLAAKYTVARMMERDDFTKRYKAGVPISVHEFLYPLMQGYDSVALKSD----LELGGTDQ 217

Query: 203 WGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYW 261
             N++ G +L +         LT PLL    G  KM K+    + +++   +P   +   
Sbjct: 218 KFNLLVGRELQKEYGQEPQCILTMPLLVGLDGVEKMSKSKGNYVGISE---APNEMFGKL 274

Query: 262 RNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEITTMVHGREEAEKA 319
            +I D  + ++   L+  P++EID  +     G+   + K ++A EI    H + +AE+A
Sbjct: 275 MSISDDLMWTYYTLLSFRPLAEIDLMKQEIALGRNPRDCKVMLAQEIVARFHSQADAERA 334

Query: 320 ATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKI 379
                           +P I +S       +G+  L+ +AG   ST++A R+++   +KI
Sbjct: 335 LEDF-NHRARGGVPDDIPQIELS----GAPLGIAQLLKQAGLCPSTSDANRNIEQGGVKI 389

Query: 380 NNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           + ++IS++ L++        G   +  GK+      L
Sbjct: 390 DGTVISDKGLKVDA------GTFVMQVGKRRFARVVL 420


>gi|33151869|ref|NP_873222.1| tyrosyl-tRNA synthetase [Haemophilus ducreyi 35000HP]
 gi|81423698|sp|Q7VN81|SYY_HAEDU RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|33148090|gb|AAP95611.1| tyrosyl-tRNA synthetase [Haemophilus ducreyi 35000HP]
          Length = 396

 Score =  403 bits (1035), Expect = e-110,   Method: Composition-based stats.
 Identities = 107/419 (25%), Positives = 182/419 (43%), Gaps = 27/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M       L+ L  RG  +  S    +  L     +   +G D TA  +H GH   +  L
Sbjct: 1   MAQSIEAILAELK-RGVENIYSEEDLIAKLKENRPLRIKLGADPTAPDIHLGHTVVINKL 59

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+ I L+G  T ++GDPS ++ +R  +  +++  N E  K      +      
Sbjct: 60  RQFQQLGHEVIFLIGDFTGMVGDPSGKNTTRPPLTREDVLRNAETYKQQLFKILD----P 115

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               ++ N  WL  +    ++R + S ++V RML  +  + R    Q ++  EF Y +LQ
Sbjct: 116 NKTRVVFNSAWLNELGTEGMIR-LTSNYTVARMLERDDFKKRFTNNQPIAIHEFIYPLLQ 174

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGK 239
            YD V L  +    +++GG+DQ  N++ G +L +  +     A+T PLL    G  KM K
Sbjct: 175 GYDSVALQAD----VELGGTDQTFNLLVGRELQKSAEQKPQVAITLPLLVGLDGEKKMSK 230

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINE 297
           +L   I + +   +P   +    +I D  +  +   L+  P++EI ++      GK   +
Sbjct: 231 SLGNYIGVTE---APNEMFGKVMSISDELMWDWYNLLSFRPLAEITQLKADVDAGKNPRD 287

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A EI T  H   EA+ A    +  F        MP         +  +GL TL+ 
Sbjct: 288 VKILLAKEIITRFHSEAEADLAEQHFINRFQKGAIPDEMPEFC-----FNGEIGLATLLK 342

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +AG   ST+EA R  +   +KI+   I + +   +L      G      GK+      +
Sbjct: 343 EAGLVASTSEAIRSAQQGGVKIDGQKIDDVRANAQL------GTFVYQVGKRKFARVTV 395


>gi|62185046|ref|YP_219831.1| tyrosyl-tRNA synthetase [Chlamydophila abortus S26/3]
 gi|81312787|sp|Q5L661|SYY_CHLAB RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|62148113|emb|CAH63870.1| tyrosyl-tRNA synthetase [Chlamydophila abortus S26/3]
          Length = 412

 Score =  403 bits (1035), Expect = e-110,   Method: Composition-based stats.
 Identities = 138/424 (32%), Positives = 218/424 (51%), Gaps = 29/424 (6%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           DF+  L +RG +   S+   LD + +   V+AY+G+D TA SLH GH   +  L  +   
Sbjct: 3   DFIQHLQDRGILENFSS--GLDNVST--PVSAYLGFDPTAPSLHIGHWIGICFLRRMAHF 58

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           G  P++L+G  T +IGDPS +   R ++   ++  N +K+    + ++          ++
Sbjct: 59  GLTPVALVGSATGMIGDPSGKSIERTLLEESQVAYNSQKLSECLAYYL------PGVQIV 112

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL     ID LR++G  F +  ML  ++V+ R++ E+ +S+ EF+YM+LQ+YDF  
Sbjct: 113 NNIDWLKETTVIDFLRDVGKHFRLGVMLGKDTVKQRVQSEEGISYTEFSYMLLQSYDFAY 172

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L +NY   LQ GGSDQWGNI  GID   R    + + LT PLLT + G K+GKT SG IW
Sbjct: 173 LFENYGVCLQCGGSDQWGNITSGIDYIRRHGLGQAYGLTYPLLTNSQGKKIGKTESGTIW 232

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           L+ ++TSPY  +QY+  + D +V   A+ LT L   EI  + +    +    KK +A  +
Sbjct: 233 LDPKLTSPYELYQYFLRLPDQEVPKVARTLTLLSNEEIFDLDQKFLLDPVAVKKFVAETL 292

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISIS--KDEVSRGMGL------------ 352
            T +HG +   +A          SIH   + ++S    +D V+ G  +            
Sbjct: 293 VTSIHGEDGLREAQ-----VVTQSIHPGKVSSVSEKDFQDLVAMGQAVSLEGTQALGKRW 347

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           + L V  G  +S  EARR ++   + +N+  I NE    +         + L+ GKK  +
Sbjct: 348 IDLFVALGVCSSKGEARRLIEQKGLYVNSEPIENEHSVFEETQVCFDQYVLLAQGKKKKL 407

Query: 413 ICHL 416
           +  L
Sbjct: 408 VLRL 411


>gi|323702081|ref|ZP_08113749.1| tyrosyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574]
 gi|323532963|gb|EGB22834.1| tyrosyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574]
          Length = 408

 Score =  403 bits (1035), Expect = e-110,   Method: Composition-based stats.
 Identities = 103/415 (24%), Positives = 185/415 (44%), Gaps = 26/415 (6%)

Query: 11  ILSERGFIHQISNPRELDIL----CSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
            + +RG    +     ++ L     +   +   +G D TA  +H GH   L  L   Q+ 
Sbjct: 9   EIIKRGTAEIVPEEELVEKLKKSVANNKPLHIKLGLDPTAPDIHLGHTVVLQKLRQFQEL 68

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHK   ++G  T  IGDP+ + E+R+ +  +++  N +  +      +          + 
Sbjct: 69  GHKVTIILGDYTGRIGDPTGKSETRKQLTEEQVLANAKTYEQQIFKILD----PQKTSVR 124

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
            N TWL  +K+ D++R + +  +V RML  E    R K    +S  EF Y ++Q YD V 
Sbjct: 125 FNSTWLAPLKFEDVIR-LAATTTVARMLEREDFSKRFKENLPISIHEFFYPLMQGYDSVA 183

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAI 245
           L    +  +++GG+DQ  N++ G  L +        AL  P+L    G  KM K+L   I
Sbjct: 184 L----EADIELGGTDQKFNLLMGRTLQKEFGQEPQIALMMPILEGLDGVNKMSKSLGNYI 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSE---IDRMAKLQGKEINEAKKII 302
            +++    P   +    ++ D  +V + + +T +P+ E   I +          + K  +
Sbjct: 240 GIDE---PPQEMYGKTMSLPDELMVRYFELVTPVPLEEVRSIAKGLAEGTLHPRDVKMRL 296

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLL-TLIVKAGF 361
           A EI +  HG E A +A     + F        +    +++D    G+ +L  L+ +A  
Sbjct: 297 AREIVSFYHGPEAAMQAEEQFKKVFQKKELPDEIDQFVVTEDLYEDGLVILPRLMTQAKL 356

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           A+ST+EARR +K  A+KI+   +++  L+    D      + +  GK+      L
Sbjct: 357 ASSTSEARRLIKEGAVKIDGEKVTDPNLRFAPTD-----GMVIRAGKRRFARLSL 406


>gi|188591234|ref|YP_001795834.1| tyrosyl-tRNA synthetase [Cupriavidus taiwanensis LMG 19424]
 gi|170938128|emb|CAP63114.1| TYROSYL-TRNA SYNTHETASE [Cupriavidus taiwanensis LMG 19424]
          Length = 413

 Score =  402 bits (1034), Expect = e-110,   Method: Composition-based stats.
 Identities = 97/386 (25%), Positives = 172/386 (44%), Gaps = 26/386 (6%)

Query: 35  VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMM 94
            +   +G D TA  +H GH   L  L  LQ  GH+ I L+G  TS IGDPS R+ +R  +
Sbjct: 51  PLRIKLGLDPTAPDIHIGHTVVLNKLRQLQDLGHQVIFLIGDFTSTIGDPSGRNSTRPPL 110

Query: 95  RSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRML 154
             ++I+ N +      S  +     +    +  N  W   +    ++ ++ + ++V RM+
Sbjct: 111 TREQIEANAQTYYRQASLVLDPARTE----IRYNSEWCDPLGARGMI-QLAAKYTVARMM 165

Query: 155 SFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
             +    R +    +S  EF Y ++Q YD V L  +    L++GG+DQ  N++ G +L +
Sbjct: 166 ERDDFTKRFRSGIPISVHEFLYPLMQGYDSVALKSD----LELGGTDQKFNLLVGRELQK 221

Query: 215 RLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFA 273
                    LT PLL    G  KM K+    + + +   +P   +    +I D  +  + 
Sbjct: 222 EYGQEPQCILTMPLLVGLDGVEKMSKSKGNYVGVTE---APNEMFGKLMSISDDLMWQYF 278

Query: 274 KRLTTLPMSEID--RMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSI 331
             L+  PMSEID  +     G+   + K ++A EI    H + +AEKA            
Sbjct: 279 TLLSFRPMSEIDLMKQEIAAGRNPRDCKVLLAQEIVARFHSQADAEKALEDF-NHRARGG 337

Query: 332 HSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
               +P +S+        +G+  L+ +A    ST+EA R+++   +KI+ + +S++  ++
Sbjct: 338 VPDDIPAVSLE----GAPLGIAQLLKQANLVPSTSEANRNIEQGGVKIDGATVSDKATRV 393

Query: 392 KLQDFDSTGNIKLSFGKKNHIICHLC 417
                   G   +  GK+      L 
Sbjct: 394 AA------GTYVVQVGKRRFARVTLA 413


>gi|255506637|ref|ZP_05382276.1| tyrosyl-tRNA synthetase [Chlamydia trachomatis D(s)2923]
 gi|289525107|emb|CBJ14578.1| tyrosyl-tRNA synthetase [Chlamydia trachomatis Sweden2]
 gi|296434650|gb|ADH16828.1| tyrosyl-tRNA synthetase [Chlamydia trachomatis E/150]
          Length = 412

 Score =  402 bits (1034), Expect = e-110,   Method: Composition-based stats.
 Identities = 135/419 (32%), Positives = 214/419 (51%), Gaps = 21/419 (5%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            +  L +RG +   S    L+ L     V+AY+G+D TA SLH GH   +  L  L   G
Sbjct: 4   LIDNLKKRGILDNSS--AGLESLTV--PVSAYLGFDPTAPSLHIGHWIGICFLCRLAAYG 59

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
             P++L+GG T +IGDPS +   R ++   ++ +N +KI    +S++          ++N
Sbjct: 60  ITPVALVGGATGMIGDPSGKSVERSLLDQAQVLDNSKKIAAALASYL------PGIRIVN 113

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL S+  +D LR++G  F +  ML+ + V+ R+  E+ +S+ EF+Y++LQ+YDF  L
Sbjct: 114 NADWLGSLSMVDFLRDVGKHFRLGSMLAKDVVKQRVYSEEGISYTEFSYLLLQSYDFAHL 173

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            K ++  LQ GGSDQWGNI  GID   R    + + LT PLLT + G K+GKT SG IWL
Sbjct: 174 FKEHNVVLQCGGSDQWGNITSGIDYIRRRGLGQAYGLTYPLLTDSKGKKIGKTESGTIWL 233

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           +  +T PY  +QY+  + D ++    + LT L   EI  + +    +    KK IA  I 
Sbjct: 234 DPALTPPYELFQYFLRLPDQEISKVMRTLTLLDNEEIFALDERLTSDPQAVKKYIAEVIV 293

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGL----------LTLIV 357
             VHG E   +A  A    F     S     + ++  E   G+ +          L ++V
Sbjct: 294 KDVHGSEGLAQAQAATESFFASKGKSITEAEL-VALVESGVGVKVARADLIGKRWLDIVV 352

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           + GF +S  +ARR ++   + IN   +++E+  +          + LS GK+   +  L
Sbjct: 353 ELGFCSSRGQARRLIQQRGLYINQEPLADEQSILDGTQLCFDRYVLLSQGKRKKQVIDL 411


>gi|300705146|ref|YP_003746749.1| tyrosyl-tRNA synthetase [Ralstonia solanacearum CFBP2957]
 gi|299072810|emb|CBJ44165.1| tyrosyl-tRNA synthetase [Ralstonia solanacearum CFBP2957]
          Length = 423

 Score =  402 bits (1034), Expect = e-110,   Method: Composition-based stats.
 Identities = 100/414 (24%), Positives = 186/414 (44%), Gaps = 30/414 (7%)

Query: 11  ILSERG----FIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
            +++RG     I      +      +   +   +G D TA  +H GH   L  +  LQ  
Sbjct: 33  EITQRGCDELLIAAEWEQKLARSAATGVPLRIKLGLDPTAPDIHIGHTVVLNKMRQLQDL 92

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+ I L+G  TS IGDPS R+ +R  +  ++I+ N +      S  +     +    + 
Sbjct: 93  GHQVIFLIGDFTSTIGDPSGRNATRPPLTREQIEANAQTYYRQASMVLDPSKTE----IR 148

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
            N  W   +    ++ ++ + ++V RM+  +    R K    +S  EF Y ++Q YD V 
Sbjct: 149 YNSEWSDPLGARGMI-QLAARYTVARMMERDDFTKRYKAGVPISVHEFLYPLMQGYDSVA 207

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAI 245
           L  +    L++GG+DQ  N++ G +L +         LT PLL    G  KM K+    +
Sbjct: 208 LKSD----LELGGTDQKFNLLVGRELQKEYGQEPQCILTMPLLVGLDGVEKMSKSKGNYV 263

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIA 303
            + +   +P   +    +I D  + ++   L+  PM+EI+  +     G+   + K ++A
Sbjct: 264 GIAE---APGEMFGKLMSISDDLMWTYFTLLSFRPMAEIEMMKQEVALGRNPRDCKVLLA 320

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
            EI +  H + +AE+A                +P I +S       +G+  L+ +AG   
Sbjct: 321 QEIISRFHSQADAERALEDF-NHRARGGVPDDIPQIELS----GAPIGIAQLLKQAGLCP 375

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           ST++A R+++   +KI+ ++IS++ L+++       G   +  GK+      L 
Sbjct: 376 STSDANRNIEQGGVKIDGAVISDKGLKVEA------GTFVMQVGKRRFARVVLS 423


>gi|320164665|gb|EFW41564.1| tyrosyl-tRNA synthetase [Capsaspora owczarzaki ATCC 30864]
          Length = 500

 Score =  402 bits (1034), Expect = e-110,   Method: Composition-based stats.
 Identities = 124/454 (27%), Positives = 217/454 (47%), Gaps = 58/454 (12%)

Query: 9   LSILSERGFIHQISNP-RELDILCSQ-GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           L+ L  RG +H  ++    L            Y G+D TA SLHAG+L  LM +    + 
Sbjct: 50  LTELQWRGLLHAHTSSFEGLAATLRSPNRACLYAGFDPTADSLHAGNLLVLMGMLHFHRA 109

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+ I+L+GG T  +GDPS R   R M+    +  N               +      ++
Sbjct: 110 GHQVIALVGGATGQVGDPSGRQTERSMLAVNTVASNAAGSPT---------SSPKPVTVV 160

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK---------REQSLSFLEFNYM 177
           NN  W   +  ++ +R++G  F +  ML  ESV+SRL+             +SF EF Y 
Sbjct: 161 NNLDWYAPMNVLEFVRDVGQHFRMTTMLGKESVKSRLQPQSTSASGTEPAGMSFTEFTYQ 220

Query: 178 ILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
           + QAYD+ +L +   CRLQ+GGSDQWGNI  G DL  ++   +   +T PL+TT++G K 
Sbjct: 221 LFQAYDYYQLHERNQCRLQLGGSDQWGNITAGCDLIRKVTGKEAHGVTMPLVTTSTGEKF 280

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE 297
           GK++  A+W++   T+P+ ++Q++   +D+    + +  T L + EI  +A+   +  N+
Sbjct: 281 GKSMGNAVWMDAAKTTPFEWYQFFLRSEDSQAERYLRYYTFLSLDEITDIARRHAEAPNK 340

Query: 298 --AKKIIATEITTMVHGREEAEKAATAAMEC----------------------------F 327
             A+  +A ++T +VHGRE   +A  +                                F
Sbjct: 341 RIAQTALADQVTLLVHGREGLAEAHRSTKLLYHRGGSGSGSPNSTNSNEVQATDSSNSPF 400

Query: 328 DMS------IHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINN 381
           +++      + S   P+I++S+ E+ + + L+  +V+ G   S +EA++ +++  + +N+
Sbjct: 401 ELTSAEVAALLSAQTPSINVSRSELGQ-LLLIDALVRLGLTPSKSEAKKLIRNGGVSVNS 459

Query: 382 SIISNEKLQIKLQDFDSTGN-IKLSFGKKNHIIC 414
               NE+  +         N   L  GK+ H + 
Sbjct: 460 VKSVNERDVLGENHALKDSNATLLRVGKRAHGLV 493


>gi|291288189|ref|YP_003505005.1| tyrosyl-tRNA synthetase [Denitrovibrio acetiphilus DSM 12809]
 gi|290885349|gb|ADD69049.1| tyrosyl-tRNA synthetase [Denitrovibrio acetiphilus DSM 12809]
          Length = 402

 Score =  402 bits (1034), Expect = e-110,   Method: Composition-based stats.
 Identities = 112/419 (26%), Positives = 176/419 (42%), Gaps = 34/419 (8%)

Query: 9   LSILSERGFIHQISNPRELDILCSQ----GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           L  L  RG    IS    L  L         +    G+D TA  LH GH   +  L   Q
Sbjct: 8   LEQLK-RGCEEIISEEDLLKKLTKSYETDTPLRVKAGFDPTAPDLHLGHTVLIQKLKHFQ 66

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GHK I L+G  T +IGDPS ++E+R+ +  +++  N E  K      +     +    
Sbjct: 67  DLGHKIIFLIGDFTGMIGDPSGKNETRKALTREDVLANAETYKEQVFKILDPEKTE---- 122

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           +  N  W+  +   D++R + S ++V RML  +    R K  + +S  EF Y ++Q YD 
Sbjct: 123 VAFNSVWMKDMSASDMIR-LTSHYTVARMLERDDFSKRYKENRPISIHEFIYPLIQGYDS 181

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSG 243
           V L  +    ++MGG+DQ  N++ G DL          ALT P+L    G  KM K+L  
Sbjct: 182 VALKSD----VEMGGTDQKFNLLVGRDLQRAYGQAPQIALTMPILEGLDGVQKMSKSLGN 237

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID---RMAKLQGKEINEAKK 300
            I + +   SP + +    +I D  +  +   L+   + +I+   +      K   + KK
Sbjct: 238 YIGITE---SPKDMFGKVMSITDELMFRYYLLLSDRSLEDINILKQSVADGSKHPMDVKK 294

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
            +A EI    H  E A++A     + F    +   MP   I  D     + L+ +I K G
Sbjct: 295 ELAMEIVARFHSEEAAKEAREGFEQVFSKRENPDEMPEYKIGTD-----VKLIDVITKNG 349

Query: 361 F--ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
                S +EARR  K   I I+   + +    +        G   L  GK+      + 
Sbjct: 350 LNFLPSNSEARRLAKQGGIYIDGDKVEDIDQCL------HAGQYVLKVGKRKFAKLTVS 402


>gi|317121680|ref|YP_004101683.1| tyrosyl-tRNA synthetase [Thermaerobacter marianensis DSM 12885]
 gi|315591660|gb|ADU50956.1| tyrosyl-tRNA synthetase [Thermaerobacter marianensis DSM 12885]
          Length = 421

 Score =  402 bits (1034), Expect = e-110,   Method: Composition-based stats.
 Identities = 99/416 (23%), Positives = 181/416 (43%), Gaps = 30/416 (7%)

Query: 9   LSILSERGFIHQISNPRELDI----LCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           L +L  RG    +S    L      L +   +   +G D TA  LH GH   L  L   Q
Sbjct: 24  LEVLR-RGAAEIVSEEELLQKIQRSLQTGRPLRVKLGLDPTAPDLHVGHTVVLRKLRQFQ 82

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GH+ + ++G  T  IGDP+ +  +R  +  ++++EN           +     +    
Sbjct: 83  DLGHQVVLIIGDFTGRIGDPTGKSVTRPQLTEEQVRENARTYAEQLGRILDMERTE---- 138

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           +  N+ WL  + + D++R + + ++V RML  +    R +  + ++  EF Y + QAYD 
Sbjct: 139 LTFNDRWLGPLTFADVVR-LAARYTVARMLERDDFARRYREGRPIAIHEFLYPLAQAYDS 197

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSG 243
           V +  +    +++GG+DQ  N++ G ++          AL  PLL    G  KM K+L  
Sbjct: 198 VAVRAD----VELGGTDQKFNLLVGREIQREYGQEPQVALLMPLLEGTDGKEKMSKSLGN 253

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAKK 300
            I + +    P   +    +I D  +V +    T L M+EI R+ +          +AK 
Sbjct: 254 YIGIAEP---PGQMFGKTMSIPDELIVKYMILATDLDMAEIRRLEQGMAAGTVNPRDAKL 310

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
            +A  +  M HG+  A+ A    +  F        MP +++    +      + L+  AG
Sbjct: 311 RLAHALVRMYHGKAAADAAQEEFLRVFSRHQLPAEMPEVTLPVPRLDA----VQLLRVAG 366

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            A S +EARR ++  A++++   +++ + ++   D        L  GK+      +
Sbjct: 367 MAPSNSEARRLIEQGAVRLDGRRVASPQEELAPAD-----GAVLQVGKRRFARLRV 417


>gi|29653535|ref|NP_819227.1| tyrosyl-tRNA synthetase [Coxiella burnetii RSA 493]
 gi|154706075|ref|YP_001425233.1| tyrosyl-tRNA synthetase [Coxiella burnetii Dugway 5J108-111]
 gi|81629599|sp|Q83EX7|SYY_COXBU RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|29540797|gb|AAO89741.1| tyrosyl-tRNA synthetase [Coxiella burnetii RSA 493]
 gi|154355361|gb|ABS76823.1| tyrosyl-tRNA synthetase [Coxiella burnetii Dugway 5J108-111]
          Length = 399

 Score =  402 bits (1033), Expect = e-110,   Method: Composition-based stats.
 Identities = 101/413 (24%), Positives = 190/413 (46%), Gaps = 23/413 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    +  RG +  I     L  L  +  +   +G+D TA  +H GH   L  L   Q  
Sbjct: 6   EAFEEIK-RGAVEIIHEDELLSRLAEEKPLRIKLGFDPTAPDIHLGHTVVLNKLRQFQTL 64

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+ I L+G  T++IGDP+ ++ +R+ +  + + EN +  +      +     +    + 
Sbjct: 65  GHEVIFLIGDFTAMIGDPTGKNITRQPLTREIVMENTKTYETQAFRILDPDKTQ----VT 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           +N TW+  +K  DL+R + + ++V RML  +    R   +Q ++  EF Y +LQ YD V 
Sbjct: 121 SNSTWINKLKADDLVR-LAATYTVARMLERDDFNKRYLSQQPIAIHEFLYPLLQGYDSVA 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAI 245
           L  +    +++GG+DQ  N++ G +L +         LT PLL    G  KM K+L+  I
Sbjct: 180 LKAD----VELGGTDQKFNLLVGRELQKHFGQRPQCVLTVPLLEGLDGIQKMSKSLNNYI 235

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIA 303
            + +    P   +    +I D  +  + + L+  PM EI+R  +   +G+   + K ++A
Sbjct: 236 GITEP---PEEMFGKVMSISDELMWRYYELLSFRPMREINRWREEVSEGRNPRDIKILLA 292

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
            E+ T  H +E A KA    ++ F        +  I ++ +  +  + +  ++ +AG   
Sbjct: 293 EELVTRFHSKEAATKAHQHFIDRFKRHELPTDLDEIELTAE--NTHLTIGYILQRAGLVN 350

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +T+E  R +   A++I+   + + KL I         +     GK+      +
Sbjct: 351 TTSEGLRMIAQGAVRIDGERVEDIKLAIP-----RGESHLFQVGKRRFAKVKV 398


>gi|153840518|ref|ZP_01993185.1| tyrosyl-tRNA synthetase [Vibrio parahaemolyticus AQ3810]
 gi|149745819|gb|EDM56949.1| tyrosyl-tRNA synthetase [Vibrio parahaemolyticus AQ3810]
          Length = 395

 Score =  402 bits (1033), Expect = e-110,   Method: Composition-based stats.
 Identities = 97/419 (23%), Positives = 177/419 (42%), Gaps = 28/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M + ++    I  +RG    I     +  L     +   +G D TA  +H GH      L
Sbjct: 1   MASIEAALAEI--KRGVEELIPEEELIAKLKESRPLRIKLGADPTAPDIHIGHTVIFNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+   L+G  T+++GDP+ ++ +R  +  +++  N E  K      +     K
Sbjct: 59  RLFQELGHEVTFLIGDFTAMVGDPTGKNTTRPPLSREDVLRNAETYKEQVFKILDPAKTK 118

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N  WL  +    ++R + +  +V RML  ++ + R    Q ++  EF Y +LQ
Sbjct: 119 ----IQFNSEWLSELGAEGMIR-LAANQTVARMLERDNFKKRYAGGQPIAIHEFMYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGK 239
            +D V +    +  +++GG+DQ  N++ G +L +         L  PLL    G  KM K
Sbjct: 174 GWDSVAM----ETDVELGGTDQKFNLLMGRELQKSHGQKPQVVLMMPLLVGLDGEKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINE 297
           +    I +++   +P   +    +I D  + S+ + L+  P+ EI++       GK   +
Sbjct: 230 SAGNYIGISE---APSEMFGKIMSISDDLMWSYYELLSFRPLEEIEQFKADVQAGKNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A EI    H   +A+ A    +  F  +     MP       +   G  +  L+ 
Sbjct: 287 IKVLLAKEIIARFHSEADADAAEQEFVNRFAKNQIPDEMPEF-----DFDAGTPVANLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            AG   ST+EA R +K  A K+    +++ K   +       G      GK+      +
Sbjct: 342 DAGLCASTSEAMRMVKQGAAKVEGEKVADAKFAPEA------GTYVFQVGKRKFARITI 394


>gi|302877605|ref|YP_003846169.1| tyrosyl-tRNA synthetase [Gallionella capsiferriformans ES-2]
 gi|302580394|gb|ADL54405.1| tyrosyl-tRNA synthetase [Gallionella capsiferriformans ES-2]
          Length = 399

 Score =  402 bits (1033), Expect = e-110,   Method: Composition-based stats.
 Identities = 97/414 (23%), Positives = 179/414 (43%), Gaps = 23/414 (5%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +  L ++  RG    +        L     +    G+D TA  LH GH   L  +  LQ 
Sbjct: 5   TQVLDVIK-RGADELLIEAELKQKLALGRPLRIKAGFDPTAPDLHLGHTVLLNKMRQLQD 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH  + L+G  T +IGDP+ ++ +R  +  +++ EN +  +      +     +    +
Sbjct: 64  LGHHALFLIGDFTGMIGDPTGKNATRPPLSREQVLENAQSYRDQVFKVLDPEKTE----I 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           + N TW+     +DL+R   +  +V +ML  +    R K  Q ++  EF Y ++Q YD V
Sbjct: 120 VFNSTWMDKFSAVDLIRLAATH-TVAQMLERDDFAKRYKGGQPIAIHEFIYPLVQGYDSV 178

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGA 244
            L  +    L++GG+DQ  N++ G ++      P    LT PLL    G  KM K+L   
Sbjct: 179 ALKAD----LELGGTDQKFNLLMGREMQRHYGQPAQCILTMPLLEGLDGVNKMSKSLGNY 234

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKKII 302
           I +     +P + +    +I D  +  + + L+   +SEI         G+   + K ++
Sbjct: 235 IGIT---DAPQDMFGKLMSISDVLMWRYLELLSFRSLSEIASWRAEVEGGRNPRDIKVLL 291

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFA 362
           A EI    H + +AE A       F   +    MP ++++  +    + L  L+ +AG  
Sbjct: 292 AQEIVARFHSQRDAEAALEEFDARFRKGVLPDDMPEMTVAAPDGVISVPL--LLRQAGLV 349

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             T+EA R +   A+K++   ++++   +          +    GK+      +
Sbjct: 350 DGTSEAMRMIVQGAVKLDGERVNDKGDTVAA-----GRVVVAQVGKRKFARITV 398


>gi|161831069|ref|YP_001596140.1| tyrosyl-tRNA synthetase [Coxiella burnetii RSA 331]
 gi|161762936|gb|ABX78578.1| tyrosyl-tRNA synthetase [Coxiella burnetii RSA 331]
          Length = 399

 Score =  401 bits (1032), Expect = e-110,   Method: Composition-based stats.
 Identities = 101/413 (24%), Positives = 190/413 (46%), Gaps = 23/413 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    +  RG +  I     L  L  +  +   +G+D TA  +H GH   L  L   Q  
Sbjct: 6   EAFEEIK-RGAVEIIHEDELLSRLAEEKPLRIKLGFDPTAPDIHLGHTVVLNKLRQFQTL 64

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+ I L+G  T++IGDP+ ++ +R+ +  + + EN +  +      +     +    + 
Sbjct: 65  GHEVIFLIGDFTAMIGDPTGKNITRQPLTCEIVMENTKTYETQAFRILDPDKTQ----VT 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           +N TW+  +K  DL+R + + ++V RML  +    R   +Q ++  EF Y +LQ YD V 
Sbjct: 121 SNSTWINKLKADDLVR-LAATYTVARMLERDDFNKRYLSQQPIAIHEFLYPLLQGYDSVA 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAI 245
           L  +    +++GG+DQ  N++ G +L +         LT PLL    G  KM K+L+  I
Sbjct: 180 LKAD----VELGGTDQKFNLLVGRELQKHFGQRPQCVLTVPLLEGLDGIQKMSKSLNNYI 235

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIA 303
            + +    P   +    +I D  +  + + L+  PM EI+R  +   +G+   + K ++A
Sbjct: 236 GITEP---PEEMFGKVMSISDELMWRYYELLSFRPMREINRWREEVSEGRNPRDIKILLA 292

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
            E+ T  H +E A KA    ++ F        +  I ++ +  +  + +  ++ +AG   
Sbjct: 293 EELVTRFHSKEAATKAHQHFIDRFKRHELPTDLDEIELTAE--NTHLTIGYILQRAGLVN 350

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +T+E  R +   A++I+   + + KL I         +     GK+      +
Sbjct: 351 TTSEGLRMIAQGAVRIDGERVEDIKLAIP-----RGESHLFQVGKRRFAKVKV 398


>gi|332991825|gb|AEF01880.1| tyrosyl-tRNA synthetase [Alteromonas sp. SN2]
          Length = 399

 Score =  401 bits (1032), Expect = e-110,   Method: Composition-based stats.
 Identities = 94/406 (23%), Positives = 178/406 (43%), Gaps = 22/406 (5%)

Query: 15  RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLM 74
           RG    +     ++ L S   +T   G+D TA  LH GH   +  L   Q+ GH  + L+
Sbjct: 13  RGTDEILPEEDLIEKLKSGKTLTIKAGFDPTAPDLHLGHTVLINKLRTFQQLGHTVVFLI 72

Query: 75  GGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCS 134
           G  T +IGDP+ ++ +R+ +  +++ EN +  +      +     +    +  N  W+  
Sbjct: 73  GDFTGLIGDPTGKNVTRKPLNKEQVLENAQTYQEQVFKILDPELTQ----IRFNSEWMDQ 128

Query: 135 IKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCR 194
           +    +++ + +  +V RML  +  + R    Q ++  EF Y ++Q +D V L  +    
Sbjct: 129 LGAAGMIK-LAASQTVARMLERDDFKKRYNNGQPIAIHEFLYPLVQGWDSVALKSD---- 183

Query: 195 LQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTS 253
           +++GG+DQ  N++ G +L +         +  PLL    G  KM K+L+  I +     +
Sbjct: 184 VELGGTDQRFNLLMGRELQKEQGIKPQSIVMVPLLEGLDGVQKMSKSLNNYIGIT---DA 240

Query: 254 PYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATEITTMVH 311
           P + +    +I D  +  +   L+  P+ EI  + +    G+   + K ++A EI    H
Sbjct: 241 PNDMFGKVMSISDDLMWRYYDLLSFRPLEEIAELKQRVENGENPRDIKILLAKEIIARFH 300

Query: 312 GREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRH 371
               AE A    ++ F  +     MP   I+  +   G+ +  L+ +     ST++A R 
Sbjct: 301 DDAAAEGAHQDFIQRFQKNAIPDEMPEFEIALGD--DGIAIGNLLKETKLVGSTSDAMRM 358

Query: 372 LKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           +K  A+KIN   + + +L +        G      GK+      L 
Sbjct: 359 IKQGAVKINGDKVEDTRLVLTEA-----GENVYQVGKRKFARITLA 399


>gi|113866519|ref|YP_725008.1| tyrosyl-tRNA synthetase [Ralstonia eutropha H16]
 gi|113525295|emb|CAJ91640.1| Tyrosyl-tRNA synthetase [Ralstonia eutropha H16]
          Length = 413

 Score =  401 bits (1032), Expect = e-110,   Method: Composition-based stats.
 Identities = 94/386 (24%), Positives = 173/386 (44%), Gaps = 26/386 (6%)

Query: 35  VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMM 94
            +   +G D TA  +H GH   L  L  LQ  GH+ I L+G  TS IGDPS R+ +R  +
Sbjct: 51  PLRIKLGLDPTAPDIHIGHTVVLNKLRQLQDLGHQVIFLIGDFTSTIGDPSGRNSTRPPL 110

Query: 95  RSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRML 154
             ++I+ N +      S  +     +    +  N  W   +    ++ ++ + ++V RM+
Sbjct: 111 TREQIEANAQTYYRQASLVLDPARTE----IRYNSEWCDPLGARGMI-QLAAKYTVARMM 165

Query: 155 SFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
             +    R +    +S  EF Y ++Q YD V L  +    L++GG+DQ  N++ G +L +
Sbjct: 166 ERDDFTKRFRSGIPISVHEFLYPLMQGYDSVALKSD----LELGGTDQKFNLLVGRELQK 221

Query: 215 RLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFA 273
                    LT PLL    G  KM K+    + + +   +P   +    +I D  +  + 
Sbjct: 222 EYGQEPQCILTMPLLVGLDGVEKMSKSKGNYVGVTE---APNEMFGKLMSISDDLMWQYY 278

Query: 274 KRLTTLPMSEID--RMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSI 331
             L+  P++EI+  +     G+   + K ++A EI    H + +AEKA            
Sbjct: 279 TLLSFRPLAEIELMKQEIALGRNPRDCKVLLAQEIVARFHSQADAEKALEDF-NHRARGG 337

Query: 332 HSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
               +P +S++       +G+  L+ +A    ST+EA R+++   +KI+ + +S++  ++
Sbjct: 338 VPDDIPAVSLT----GAPLGIAQLLKQANLVPSTSEANRNIEQGGVKIDGATVSDKATRV 393

Query: 392 KLQDFDSTGNIKLSFGKKNHIICHLC 417
                   G   +  GK+      L 
Sbjct: 394 AA------GTYVVQVGKRRFARVTLA 413


>gi|317402596|gb|EFV83158.1| tyrosyl-tRNA synthetase [Achromobacter xylosoxidans C54]
          Length = 409

 Score =  401 bits (1032), Expect = e-110,   Method: Composition-based stats.
 Identities = 102/385 (26%), Positives = 176/385 (45%), Gaps = 25/385 (6%)

Query: 35  VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMM 94
            +   +G D TA  +H GH   L  +  LQ  GH+ I L+G  TS IGDPS R+ +R  +
Sbjct: 45  PLRIKLGLDPTAPDIHLGHTVVLNKMRQLQDLGHEVIFLIGDFTSTIGDPSGRNSTRPPL 104

Query: 95  RSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRML 154
             ++I+ N +      S  +     +    +  N  W   +    ++ ++ S ++V RM+
Sbjct: 105 TREQIEANAKTYYAQASLVLDPARTE----IRYNSEWCDPLGARGMI-QLASRYTVARMM 159

Query: 155 SFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
             E    R K    +S  EF Y ++Q YD V L  +    L++GG+DQ  N++ G +L +
Sbjct: 160 EREDFTKRFKGGIPISVHEFLYPLMQGYDSVALKSD----LELGGTDQKFNLLVGRELQK 215

Query: 215 RLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFA 273
                    LT PLL    G  KM K+    I +++   SP + +    +I D  +  + 
Sbjct: 216 EYGQEPQCILTMPLLVGTDGVEKMSKSKGNYIGISE---SPDSMFGKLMSISDTLMWRYF 272

Query: 274 KRLTTLPMSEID--RMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSI 331
           + L+   + +I   R     G+   +AK ++A EI T  H  + AE A  A    F    
Sbjct: 273 ELLSFRSLEDIAALRQEIDGGRNPRDAKVMLAQEIITRFHSAKAAEDALAAFEARFRDGA 332

Query: 332 HSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
             + MP +S+        +G+L L+ +AG   S +EA+R+++   +++N   + ++ LQ+
Sbjct: 333 IPEDMPEVSVG----GAPVGILKLLREAGLVASGSEAQRNVEQGGVRVNGDRVEDKSLQL 388

Query: 392 KLQDFDSTGNIKLSFGKKNHIICHL 416
                   G   +  GK+      L
Sbjct: 389 PA------GTYVVQVGKRKFARVKL 407


>gi|170288258|ref|YP_001738496.1| tyrosyl-tRNA synthetase [Thermotoga sp. RQ2]
 gi|170175761|gb|ACB08813.1| tyrosyl-tRNA synthetase [Thermotoga sp. RQ2]
          Length = 401

 Score =  401 bits (1032), Expect = e-110,   Method: Composition-based stats.
 Identities = 107/410 (26%), Positives = 183/410 (44%), Gaps = 27/410 (6%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           + IL  R  +  IS    LD +  +G +   +G D +   LH GH   L  L   Q  GH
Sbjct: 7   VKILK-RNVVDLISEEELLDRIKRKGKLRVKLGVDPSRPDLHLGHAVVLRKLREFQDLGH 65

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
             + ++G  T+ IGDPS R+E+R M+  +E+ EN +  +      +     +    +  N
Sbjct: 66  TVVLIIGDFTARIGDPSGRNETRPMLTKEEVLENAKTYQEQAFKILDPERTE----LRFN 121

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL  + + D++  + S ++V RML  +    R K    ++  EF Y + QAYD V + 
Sbjct: 122 GEWLDRMTFADVI-VLASKYTVARMLERDDFAKRFKEGIPIAVSEFLYPLAQAYDSVAIQ 180

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWL 247
            +    +++GG+DQ  N++ G  + E         +T P++    G  KM K+    I  
Sbjct: 181 AD----VELGGTDQLFNLLVGRKIQEEYGQEPQIVMTMPIIEGTDGKLKMSKSYGNYIAF 236

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAKKIIAT 304
           N     P   +    +I D  ++ +   LT +P   I+   K   +      + K ++A 
Sbjct: 237 N---DPPEEMYGKLMSIPDELIIKYMHLLTNIPEEVIEEYEKKMKEKTINPRDVKMVLAY 293

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           EIT   HG E A+KA    ++ F        MP + IS+D+      ++ L+V+ G A+S
Sbjct: 294 EITRFFHGEENAKKAQEQFVKVFQKKEIPDEMPVVEISQDK-----NIVDLLVEIGAASS 348

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +EA+R +    + I+   I + K  ++       G   L  GK+     
Sbjct: 349 KSEAKRLVSQGGVYIDGERIEDIKFTVEP-----DGERVLRVGKRKFYRI 393


>gi|254253229|ref|ZP_04946547.1| Tyrosyl-tRNA synthetase [Burkholderia dolosa AUO158]
 gi|124895838|gb|EAY69718.1| Tyrosyl-tRNA synthetase [Burkholderia dolosa AUO158]
          Length = 460

 Score =  401 bits (1031), Expect = e-109,   Method: Composition-based stats.
 Identities = 97/416 (23%), Positives = 186/416 (44%), Gaps = 31/416 (7%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           K     +L E  F  +++         +   +   +G D TA  +H GH   L  +  LQ
Sbjct: 72  KRGVDELLIEEEFAQKLA-----RSAATGTPLRIKLGLDPTAPDIHIGHTVVLNKMRQLQ 126

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GH  I L+G  TS+IGDPS R+ +R  +  ++I+ N +      +  +     +    
Sbjct: 127 DLGHTVIFLIGDFTSLIGDPSGRNATRPPLTREQIEANAKTYFEQAALVLDREKTE---- 182

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           +  N  W   +    +++ + S ++V R+L  E    R +    +S  EF Y ++Q YD 
Sbjct: 183 IRYNSEWSMPLGADGMIK-LASRYTVARILEREDFTKRFQSGVPISIHEFLYPLMQGYDS 241

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSG 243
           V L  +    L++GG+DQ  N++ G +L ++    +   LT PLL    G  KM K+   
Sbjct: 242 VALNAD----LELGGTDQKFNLLVGRELQKQYGQEQQCILTMPLLEGLDGVEKMSKSKGN 297

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKI 301
            + ++++   P + +    +I D  +  + + L+   M EI   +     G+   + K +
Sbjct: 298 YVGISEK---PNDMFGKLMSISDTLMWRYFELLSFRSMDEIAGFKREAESGRNPRDFKVL 354

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGF 361
           +A EI    H + +AE+A                +P+++++       + +  L+ +AG 
Sbjct: 355 LAQEIVARFHSQADAERALEDF-NHRAKGGVPDDIPSVTLA----GAPLAIGQLLKQAGL 409

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
             ST+EA R+++   +KI+ + +S++ L++        G   +  GK+      L 
Sbjct: 410 VPSTSEALRNIEQGGVKIDGATVSDKGLKVDA------GEYVVQVGKRRFARVTLS 459


>gi|57106869|ref|XP_543740.1| PREDICTED: similar to Probable tyrosyl-tRNA synthetase,
           mitochondrial precursor (Tyrosine--tRNA ligase) (TyrRS)
           [Canis familiaris]
          Length = 477

 Score =  401 bits (1031), Expect = e-109,   Method: Composition-based stats.
 Identities = 135/437 (30%), Positives = 210/437 (48%), Gaps = 28/437 (6%)

Query: 7   DFLSILSERGFIHQISNPR----ELDILCSQG----VVTAYIGYDLTASSLHAGHLTQLM 58
             L++   RG   +    +    EL  L  +G      T Y G+D TA SLH GHL  L+
Sbjct: 37  GLLAVQKARGLFKEFFPEKGTKVELPELLDRGSGSFPQTVYCGFDPTADSLHVGHLLTLL 96

Query: 59  LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI-------EKIKGIFS 111
            LF  Q+ GH  I+L+GG T+ +GDPS R + R  +  ++++ N        E +     
Sbjct: 97  GLFHFQRAGHNVIALVGGATARLGDPSGRPKEREALAPEQVRGNARALRRGLEAVAANHQ 156

Query: 112 SFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSF 171
                G       +L+N  W      +D L  +G  F +  +LS  SV++RL+    +S 
Sbjct: 157 RLFANGRPWGSFTVLDNAAWYQGQHLVDFLAAVGGHFRMGTLLSRASVQARLQSAGGMSL 216

Query: 172 LEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT 231
            EF Y +LQAYDF  L ++Y CR+Q+GGSDQ GNI  G +   +L    +F +T PL+T+
Sbjct: 217 AEFLYQVLQAYDFYYLFQHYGCRVQLGGSDQLGNITSGYEFIHKLTGEDVFGITVPLVTS 276

Query: 232 ASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ 291
            +G K+GK+   A+WLN+E TSP+  +Q++    D  V  + K  T LP+ EID + +L 
Sbjct: 277 TTGAKLGKSAGNAVWLNREKTSPFELYQFFVRQQDNLVERYLKLFTFLPLPEIDHIMQLH 336

Query: 292 GKEI--NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM----------PTI 339
            KE      +K +A E+T +VHG+E  + A       +  SI +  +             
Sbjct: 337 DKEPEKRGPQKRLAAEVTKLVHGQEGLDSAKRCTQALYHSSIDALEVMSDQELKELFKEA 396

Query: 340 SISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL-QDFDS 398
           S S+  +  G  +L +  KA          R +    + IN+  ++N +  + + Q    
Sbjct: 397 SFSELVLDPGTSVLDICRKANAIPDGPRGYRMITEGGVSINHRQVTNPESVLVVGQHILK 456

Query: 399 TGNIKLSFGKKNHIICH 415
            G   L  GK+N  I  
Sbjct: 457 NGLSLLKIGKRNFYIIK 473


>gi|56461336|ref|YP_156617.1| tyrosyl-tRNA synthetase [Idiomarina loihiensis L2TR]
 gi|81362512|sp|Q5QVP5|SYY_IDILO RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|56180346|gb|AAV83068.1| Tyrosyl-tRNA synthetase [Idiomarina loihiensis L2TR]
          Length = 401

 Score =  401 bits (1031), Expect = e-109,   Method: Composition-based stats.
 Identities = 103/419 (24%), Positives = 196/419 (46%), Gaps = 24/419 (5%)

Query: 4   FKSDFLSILSE--RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
            K++    ++E  RG    +      + L S   +T   G+D TA  LH GH   +  L 
Sbjct: 1   MKTEVAEAIAEITRGAEEVLLEQELAEKLASGKPLTVKAGFDPTAPDLHLGHTVLINKLR 60

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKT 121
             Q  GHK + L+G  T +IGDP+ ++ +R+ + ++++  N E  K      +     + 
Sbjct: 61  VFQDFGHKVVFLIGDFTGMIGDPTGKNVTRKPLTTEQVIANAETYKEQVFKILDPAKTE- 119

Query: 122 DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA 181
              +  N  W+  +   D+++ + +  +V RML  +  + R +  QS++  EF Y ++Q 
Sbjct: 120 ---IRFNSEWMSKMGAADMIK-LAARQTVARMLERDDFKKRYQNNQSIAIHEFLYPLVQG 175

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKT 240
           +D VEL  +    +++GG+DQ  N++ G +L +         + +PLL    G  KM K+
Sbjct: 176 WDSVELKAD----VELGGTDQRFNLLMGRELQKEEGQRPQTVIMTPLLEGLDGVQKMSKS 231

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEA 298
           L+  I + +      + +    ++ D  +  + + L+   ++EID    A   GK   + 
Sbjct: 232 LNNYIGITEPAN---DMFGKIMSVSDELMWRYFQLLSFRSITEIDELKAAVADGKNPRDV 288

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVK 358
           K ++A EI    H  ++AEKA    ++ F  +     +P  ++     + GM +  ++ +
Sbjct: 289 KVLLAKEIIARFHSEDDAEKAEQDFIQRFQKNALPDDIPEKTVQVG--AEGMAIGNVLKE 346

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           AG   ST+EA R +K NA+K++    S+ +     +D   +G      GK+     +L 
Sbjct: 347 AGLVESTSEALRMIKQNAVKVDGEKFSDSRYLCTEKD---SGVY--QVGKRRFAKINLT 400


>gi|251792712|ref|YP_003007438.1| tyrosyl-tRNA synthetase [Aggregatibacter aphrophilus NJ8700]
 gi|247534105|gb|ACS97351.1| tyrosyl-tRNA synthetase [Aggregatibacter aphrophilus NJ8700]
          Length = 395

 Score =  401 bits (1031), Expect = e-109,   Method: Composition-based stats.
 Identities = 104/419 (24%), Positives = 182/419 (43%), Gaps = 28/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M    +  L+ L  RG    +S    ++ L     +   +G D TA  +H GH   L  L
Sbjct: 1   MTDMNT-VLTELK-RGVDEILSEQDLIEKLKENRPLRVKLGADPTAPDIHLGHTVVLNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+ I L+G  T ++GDPS ++ +R  +  +++  N E  K      +     +
Sbjct: 59  RQFQQFGHEVIFLIGDFTGMVGDPSGKNTTRPPLSREDVLRNAETYKQQIYKILDPQKTR 118

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N  WL  +    ++R + S ++V RML  +  + R    Q ++  EF Y +LQ
Sbjct: 119 ----IEFNSDWLGKLGTEGMIR-LASNYTVARMLERDDFKKRFSNNQPIAIHEFIYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGK 239
            +D V L    +  +++GG+DQ  N++ G +L +        A+T PLL    G  KM K
Sbjct: 174 GHDSVAL----EADIELGGTDQKFNLLVGRELQKSAGQKPQVAITLPLLVGLDGEKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINE 297
           +L   I +N+   +P   +    +I D  +  +   L+  P++EI ++ +    GK   +
Sbjct: 230 SLGNYIGVNE---APGEMFGKIMSISDDLMWDWYNLLSFRPLTEIAQLKEDVANGKNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A EI    H    A+ A    +  F        MP  +         +GL  L+ 
Sbjct: 287 VKILLAKEIIARFHDEAAADAAEQEFINRFQKGAMPDEMPEFT-----FEGEIGLANLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +AG   ST+EA R ++   +KI+   + + +L I               GK+      +
Sbjct: 342 EAGLVASTSEANRMVQQGGVKIDGEKVEDARLVITAS------TAVYQVGKRKFAKVTV 394


>gi|148664996|gb|EDK97412.1| tyrosyl-tRNA synthetase 2 (mitochondrial), isoform CRA_a [Mus
           musculus]
          Length = 479

 Score =  401 bits (1030), Expect = e-109,   Method: Composition-based stats.
 Identities = 134/432 (31%), Positives = 207/432 (47%), Gaps = 29/432 (6%)

Query: 13  SERGFIHQISNP----RELDILCS-----QGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
             RG   +         EL  L           T Y G+D T  SLH GHL  L+ LF  
Sbjct: 44  RARGLFKEFFPESGTKTELPELFDRRRAGSSPQTVYCGFDPTGDSLHVGHLLTLLGLFHF 103

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI-------EKIKGIFSSFIKY 116
           Q+ GH  I+L+GG T+++GDPS R + R  + ++ ++ N        E +    +     
Sbjct: 104 QRAGHNVIALVGGSTALLGDPSGRTKGREALSAECVRANAHALRRGLEALAANHARLFAD 163

Query: 117 GTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNY 176
           G       +L+N  W      +D L  +G  F +  +LS  SV+SRLK  + +S  EF Y
Sbjct: 164 GRPWGSFTVLDNAAWFQEQHLVDFLATVGGHFRMGTLLSRLSVQSRLKSPEGMSLAEFFY 223

Query: 177 MILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTK 236
            +LQAYDF  L ++Y CR+Q+GGSDQ GNI+ G +   +L    +F +T PL+T+ +G K
Sbjct: 224 QVLQAYDFYYLFQHYGCRVQLGGSDQLGNIMSGYEFIHKLTGEDVFGITVPLITSTTGAK 283

Query: 237 MGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI- 295
           +GK+   A+WLN+E TSP+  +Q++    D  V  + K  T LP+ EID + +L  KE  
Sbjct: 284 LGKSAGNAVWLNREKTSPFELYQFFVRQQDDSVERYLKLFTFLPLPEIDHIMQLHVKEPE 343

Query: 296 -NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM----------PTISISKD 344
              A+K +A E+T +VHG+E  + A       +  SI +  +             S S+ 
Sbjct: 344 KRVAQKRLAAEVTKLVHGQEGLDSAKRCTQALYHSSIEALEVMSDQELKELFKEASFSEL 403

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL-QDFDSTGNIK 403
            +  G  ++    KA          R +    + IN+  ++N +  + + Q     G   
Sbjct: 404 VLDPGTSVIDTCRKANAIPDGPRGYRMITEGGVSINHRQVTNPESVLVIGQHILKNGLSL 463

Query: 404 LSFGKKNHIICH 415
           L  GK+N  I  
Sbjct: 464 LKIGKRNFYIIK 475


>gi|302679374|ref|XP_003029369.1| hypothetical protein SCHCODRAFT_58262 [Schizophyllum commune H4-8]
 gi|300103059|gb|EFI94466.1| hypothetical protein SCHCODRAFT_58262 [Schizophyllum commune H4-8]
          Length = 486

 Score =  401 bits (1030), Expect = e-109,   Method: Composition-based stats.
 Identities = 150/449 (33%), Positives = 227/449 (50%), Gaps = 43/449 (9%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
              S L +RGF+   + P +L     +   T Y G D TA SLHAGHL  LM LF     
Sbjct: 38  GLYSDLKKRGFVADATRPDDLGNALQRSQQTVYAGIDPTAPSLHAGHLLYLMCLFRFHAA 97

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFI----KYGTGK-- 120
           GHK I L+GG T ++GDP+ R  +R       +++N+  ++     F     KY   +  
Sbjct: 98  GHKIIPLIGGATGLLGDPTGRRTARDPANKSVVEQNVASLEAALRKFFEGATKYAEARGI 157

Query: 121 ------TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEF 174
                 +D  + +N  W      +D    +GS   +N ML+ ESVR+RL  +  +S+ EF
Sbjct: 158 STRGVLSDLQVKSNLEWHKDFSMLDFFMVVGSHARMNTMLNKESVRTRLTSKDGMSYTEF 217

Query: 175 NYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKL------------- 221
           +Y +LQAYDF  L +NY C +Q+GGSDQWGNI+ G++L  RL+                 
Sbjct: 218 SYQLLQAYDFYHLFRNYGCTIQVGGSDQWGNIVSGLELIARLEGEDAVENPSETKVSSRC 277

Query: 222 FALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPM 281
           F LT+PLLTTASG K GK+   A+WL+ ++TSP+ F+QYW   +D DV  + K  T +  
Sbjct: 278 FGLTTPLLTTASGEKFGKSAGNAVWLDTKLTSPFAFYQYWILTEDKDVEKYLKLFTLVSD 337

Query: 282 SEIDRMAKLQGKEINE--AKKIIATEITTMVH---GREEAEKAAT---------AAMECF 327
           +EI+ + +      ++  A++ +A E+T +VH   GRE AEKA            A E F
Sbjct: 338 AEIESVMQEHNAAPHKRIAQRRLAAEVTELVHQKSGRELAEKATRLMFGDAGDMTASEVF 397

Query: 328 DMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNE 387
             S        + + + ++  G  + +L  + G   S +EARR  KS    +N+ ++  E
Sbjct: 398 --SALKGDPRLVLLDEGDLV-GARIFSLATEHGLVASKSEARRLGKSKGFYVNHGVV-GE 453

Query: 388 KLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
              ++ +D        L  GK N ++  L
Sbjct: 454 DRALEREDLIEGKFAVLRAGKSNVLVVGL 482


>gi|161525869|ref|YP_001580881.1| tyrosyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
 gi|221214507|ref|ZP_03587478.1| tyrosyl-tRNA synthetase [Burkholderia multivorans CGD1]
 gi|160343298|gb|ABX16384.1| tyrosyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
 gi|221165764|gb|EED98239.1| tyrosyl-tRNA synthetase [Burkholderia multivorans CGD1]
          Length = 454

 Score =  401 bits (1030), Expect = e-109,   Method: Composition-based stats.
 Identities = 98/416 (23%), Positives = 186/416 (44%), Gaps = 31/416 (7%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           K     +L E  F  +++         +   +   +G D TA  +H GH   L  +  LQ
Sbjct: 66  KRGVDELLIEEEFAQKLA-----RSAATGKPLRIKLGLDPTAPDIHIGHTVVLNKMRQLQ 120

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GH  I L+G  TS+IGDPS R+ +R  +  ++I+ N +      +  +     +    
Sbjct: 121 DLGHTVIFLIGDFTSLIGDPSGRNATRPPLTREQIEANAKTYFEQAALVLDRDKTE---- 176

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           +  N  W   +    +++ + S ++V R+L  E    R +    +S  EF Y ++Q YD 
Sbjct: 177 IRYNSEWSMPLGADGMIK-LASRYTVARILEREDFTKRFQGGVPISIHEFLYPLMQGYDS 235

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSG 243
           V L  +    L++GG+DQ  N++ G +L ++    +   LT PLL    G  KM K+   
Sbjct: 236 VALNAD----LELGGTDQKFNLLVGRELQKQYGQEQQCILTMPLLEGLDGVEKMSKSKGN 291

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKI 301
            + ++++   P + +    +I D  +  + + L+   M EI   +     G+   + K +
Sbjct: 292 YVGISEK---PTDMFGKLMSISDTLMWRYFELLSFRSMDEIAGFKREAEGGRNPRDFKVM 348

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGF 361
           +A EI    H + +AE+A                +P++S++       + +  L+ +AG 
Sbjct: 349 LAQEIVARFHSQADAERALEDF-NHRAKGGVPDDIPSVSLA----GAPLAIGQLLKQAGL 403

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
             ST+EA R+++   +KI+ + +S++ L++        G   +  GK+      L 
Sbjct: 404 VPSTSEALRNIEQGGVKIDGTTVSDKGLKVDA------GEYVVQVGKRRFARVTLA 453


>gi|167586143|ref|ZP_02378531.1| tyrosyl-tRNA synthetase [Burkholderia ubonensis Bu]
          Length = 413

 Score =  401 bits (1030), Expect = e-109,   Method: Composition-based stats.
 Identities = 99/416 (23%), Positives = 187/416 (44%), Gaps = 31/416 (7%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           K     +L E  F  +++         +   +   +G D TA  +H GH   L  +  LQ
Sbjct: 25  KRGVDELLIEEEFAQKLA-----RSAATGKPLRIKLGLDPTAPDIHIGHTVVLNKMRQLQ 79

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GH  I L+G  TS+IGDPS R+ +R  +  ++I+ N +      +  +     +    
Sbjct: 80  DLGHTVIFLIGDFTSLIGDPSGRNATRPPLTREQIEANAKTYFEQAALVLDRDKTE---- 135

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           +  N  W   +    +++ + S ++V R+L  E    R +    +S  EF Y ++Q YD 
Sbjct: 136 IRYNSEWSMPLGADGMIK-LASRYTVARILEREDFTKRFQSGVPISIHEFLYPLMQGYDS 194

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSG 243
           V L  +    L++GG+DQ  N++ G +L ++    +   LT PLL    G  KM K+   
Sbjct: 195 VALNAD----LELGGTDQKFNLLVGRELQKQYGQEQQCILTMPLLEGLDGVEKMSKSKGN 250

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKI 301
            + ++++   P + +    +I D  +  + + L+   M EI   R     G+   + K +
Sbjct: 251 YVGISEK---PNDMFGKLMSISDTLMWRYFELLSFRSMDEIVGFRREIETGRNPRDFKVL 307

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGF 361
           +A EI    H + +AE+A                +P+++++       + +  L+ +AG 
Sbjct: 308 LAQEIVARFHSQADAERALEDF-NHRAKGGVPDDIPSVTLA----GAPLAIGQLLKQAGL 362

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
             ST+EA R+++   +KI+ + I+++ L+I+       G   +  GK+      L 
Sbjct: 363 VPSTSEALRNIEQGGVKIDGTAITDKGLKIEA------GEYVVQVGKRRFARVTLT 412


>gi|149713907|ref|XP_001503258.1| PREDICTED: similar to LOC536956 protein [Equus caballus]
          Length = 478

 Score =  400 bits (1029), Expect = e-109,   Method: Composition-based stats.
 Identities = 134/432 (31%), Positives = 208/432 (48%), Gaps = 29/432 (6%)

Query: 13  SERGFIHQISNPR----ELDILCSQG-----VVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
             RG   +    R    EL  L  +        T Y G+D TA SLH GHL  L+ LF  
Sbjct: 43  KARGLFKEFFPDRGTKIELPELFDRRTAGHLPQTIYCGFDPTADSLHVGHLLTLLGLFHF 102

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI-------EKIKGIFSSFIKY 116
           Q+ GH  I+L+GG T+ +GDPS R + R  + ++ +Q N        E +          
Sbjct: 103 QRAGHNVIALVGGATARLGDPSGRTKEREALDAERVQSNARALRRELETLAAHHQQLFTN 162

Query: 117 GTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNY 176
           G       +L+N +W      +D L  +G  F +  +LS +SV++RLK  + +S  EF Y
Sbjct: 163 GRTWGSFTVLDNSSWYQQQHLVDFLAAVGGHFRMGTLLSRQSVQTRLKSPEGMSLAEFLY 222

Query: 177 MILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTK 236
            +LQAYDF  L + Y CR+Q+GGSDQ GNI+ G +   +L    +F +T PL+T+ +G K
Sbjct: 223 QVLQAYDFYYLFQRYGCRVQLGGSDQLGNIMSGYEFIHKLTGEDVFGITVPLITSTTGAK 282

Query: 237 MGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN 296
           +GK+   A+WLN++ TSP+  +Q++    D  V  + K  T LP+ EID + +   KE  
Sbjct: 283 LGKSAGNAVWLNRDKTSPFELYQFFVRQQDDSVERYLKLFTFLPLPEIDHIMQQHVKEPE 342

Query: 297 E--AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM----------PTISISKD 344
           +   +K +A E+T +VHG+E  + A       +  SI +  +             S S+ 
Sbjct: 343 KWGPQKRLAAEVTKLVHGQEGLDSAKRCTQALYHSSIDALEVMSDQELKELFKEASFSEL 402

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL-QDFDSTGNIK 403
            +  G  +L    KA          R +    + IN+  ++N +  + + Q     G   
Sbjct: 403 VLDPGTSVLDTCRKANAIPDGPRGYRMITEGGVSINHRQVTNPESVLVVGQHILKNGLSL 462

Query: 404 LSFGKKNHIICH 415
           L  GK+N  I  
Sbjct: 463 LKIGKRNFYIIK 474


>gi|226198405|ref|ZP_03793974.1| tyrosine--tRNA ligase [Burkholderia pseudomallei Pakistan 9]
 gi|225929588|gb|EEH25606.1| tyrosine--tRNA ligase [Burkholderia pseudomallei Pakistan 9]
          Length = 460

 Score =  400 bits (1029), Expect = e-109,   Method: Composition-based stats.
 Identities = 98/416 (23%), Positives = 186/416 (44%), Gaps = 31/416 (7%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           K     +L E  F  +++         +   +   +G D TA  +H GH   L  +  LQ
Sbjct: 72  KRGVDELLIEEEFAQKLA-----KSAATGKPLRIKLGLDPTAPDIHLGHTVVLNKMRQLQ 126

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GH  I L+G  TS+IGDPS R+ +R  +  ++I+ N +      +  +     +    
Sbjct: 127 DLGHTVIFLIGDFTSLIGDPSGRNATRPPLTREQIESNAKTYFEQAALVLDRAKTE---- 182

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           +  N  W   +    +++ + S ++V RML  E    R +    +S  EF Y ++Q YD 
Sbjct: 183 IRYNSEWSMPLGADGMIK-LASRYTVARMLEREDFTKRFQGGIPISIHEFLYPLMQGYDS 241

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSG 243
           V L  +    L++GG+DQ  N++ G +L ++    +   LT PLL    G  KM K+   
Sbjct: 242 VALNAD----LELGGTDQKFNLLVGRELQKQYGQEQQCILTMPLLEGLDGVEKMSKSKGN 297

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKKI 301
            + ++++   P + +    +I D  +  + + L+   + EI R       G+   + K +
Sbjct: 298 YVGISEK---PTDMFGKLMSISDVLMWRYFELLSFRSLDEIARFRGEAEGGRNPRDFKVM 354

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGF 361
           +A EI    H + +AE+A                +P ++++       + +  L+ +AG 
Sbjct: 355 LAQEIVARFHSQADAERALEDF-NHRAKGGVPDDIPAVTLA----GAPLAIGQLLKQAGL 409

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
             ST+EA R+++   +KI+ + +S++ L++   +F       +  GK+      L 
Sbjct: 410 VPSTSEALRNIEQGGVKIDGATVSDKALKVDAGEF------VVQVGKRRFARVTLT 459


>gi|241662005|ref|YP_002980365.1| tyrosyl-tRNA synthetase [Ralstonia pickettii 12D]
 gi|240864032|gb|ACS61693.1| tyrosyl-tRNA synthetase [Ralstonia pickettii 12D]
          Length = 421

 Score =  400 bits (1029), Expect = e-109,   Method: Composition-based stats.
 Identities = 99/397 (24%), Positives = 183/397 (46%), Gaps = 27/397 (6%)

Query: 24  PRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIG 82
            ++L    + G  +   +G D TA  +H GH   L  +  LQ  GH+ I L+G  TS IG
Sbjct: 47  EQKLAKSAATGVPLRIKLGLDPTAPDIHIGHTVVLNKMRQLQDLGHQVIFLIGDFTSTIG 106

Query: 83  DPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLR 142
           DPS R+ +R  +  ++I+ N +      S  +     +    +  N  W   +    ++ 
Sbjct: 107 DPSGRNATRPSLTREQIETNAQTYYRQASMVLDPSKTE----IRYNSEWCDPLGARGII- 161

Query: 143 EIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQ 202
           ++ + ++V RM+  +    R K    +S  EF Y ++Q YD V L  +    L++GG+DQ
Sbjct: 162 QLAAKYTVARMMERDDFTKRYKAGVPISVHEFLYPLMQGYDSVALKSD----LELGGTDQ 217

Query: 203 WGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYW 261
             N++ G +L +         LT PLL    G  KM K+    + +++   +P   +   
Sbjct: 218 KFNLLVGRELQKEYGQEPQCILTMPLLVGLDGVEKMSKSKGNYVGISE---APNEMFGKL 274

Query: 262 RNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEITTMVHGREEAEKA 319
            +I D  + ++   L+  P++EID  +     G+   + K ++A EI    H + +AE+A
Sbjct: 275 MSISDDLMWTYYTLLSFRPLAEIDLMKQEIALGRNPRDCKVMLAQEIVARFHSQADAERA 334

Query: 320 ATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKI 379
                           +P I +S       +G+  L+ +AG   ST++A R+++   +KI
Sbjct: 335 LEDF-NHRARGGVPDDIPQIELS----GAPLGIAQLLKQAGLCPSTSDANRNIEQGGVKI 389

Query: 380 NNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           + ++IS++ L+++       G   +  GK+      L
Sbjct: 390 DGTVISDKGLKVEA------GTFVMQVGKRRFARVVL 420


>gi|28899244|ref|NP_798849.1| tyrosyl-tRNA synthetase [Vibrio parahaemolyticus RIMD 2210633]
 gi|260362167|ref|ZP_05775157.1| tyrosine--tRNA ligase [Vibrio parahaemolyticus K5030]
 gi|260879062|ref|ZP_05891417.1| tyrosine--tRNA ligase [Vibrio parahaemolyticus AN-5034]
 gi|260895937|ref|ZP_05904433.1| tyrosine--tRNA ligase [Vibrio parahaemolyticus Peru-466]
 gi|260900668|ref|ZP_05909063.1| tyrosine--tRNA ligase [Vibrio parahaemolyticus AQ4037]
 gi|81726996|sp|Q87LY8|SYY2_VIBPA RecName: Full=Tyrosyl-tRNA synthetase 2; AltName:
           Full=Tyrosine--tRNA ligase 2; Short=TyrRS 2
 gi|28807468|dbj|BAC60733.1| tyrosyl-tRNA synthetase [Vibrio parahaemolyticus RIMD 2210633]
 gi|308085376|gb|EFO35071.1| tyrosine--tRNA ligase [Vibrio parahaemolyticus Peru-466]
 gi|308089604|gb|EFO39299.1| tyrosine--tRNA ligase [Vibrio parahaemolyticus AN-5034]
 gi|308110889|gb|EFO48429.1| tyrosine--tRNA ligase [Vibrio parahaemolyticus AQ4037]
 gi|308111058|gb|EFO48598.1| tyrosine--tRNA ligase [Vibrio parahaemolyticus K5030]
 gi|328474221|gb|EGF45026.1| tyrosyl-tRNA synthetase [Vibrio parahaemolyticus 10329]
          Length = 395

 Score =  400 bits (1029), Expect = e-109,   Method: Composition-based stats.
 Identities = 97/419 (23%), Positives = 176/419 (42%), Gaps = 28/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M + ++    I  +RG    I     +  L     +   +G D TA  +H GH      L
Sbjct: 1   MASIEAALAEI--KRGVEELIPEEELIAKLKEGRPLRIKLGADPTAPDIHLGHTVIFNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+   L+G  T+++GDP+ ++ +R  +  +++  N E  K      +     K
Sbjct: 59  RLFQELGHEVTFLIGDFTAMVGDPTGKNTTRPPLSREDVLRNAETYKEQVFKILDPAKTK 118

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N  WL  +    ++R + +  +V RML  +  + R    Q ++  EF Y +LQ
Sbjct: 119 ----IQFNSEWLSELGAEGMIR-LAANQTVARMLERDDFKKRYAGGQPIAIHEFMYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGK 239
            +D V +    +  +++GG+DQ  N++ G +L +         L  PLL    G  KM K
Sbjct: 174 GWDSVAM----ETDVELGGTDQKFNLLMGRELQKSHGQKPQVVLMMPLLVGLDGEKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINE 297
           +    I +++   +P   +    +I D  + S+ + L+  P+ EI++       GK   +
Sbjct: 230 SAGNYIGISE---APSEMFGKIMSISDDLMWSYYELLSFRPLEEIEQFKADVQAGKNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A EI    H   +A+ A    +  F  +     MP       +   G  +  L+ 
Sbjct: 287 IKVLLAKEIIARFHSEADADAAEQEFVNRFAKNQIPDEMPEF-----DFDAGTPVANLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            AG   ST+EA R +K  A K+    +++ K   +       G      GK+      +
Sbjct: 342 DAGLCASTSEAMRMVKQGAAKVEGEKVADAKFAPEA------GTYVFQVGKRKFARITI 394


>gi|296133365|ref|YP_003640612.1| tyrosyl-tRNA synthetase [Thermincola sp. JR]
 gi|296031943|gb|ADG82711.1| tyrosyl-tRNA synthetase [Thermincola potens JR]
          Length = 407

 Score =  400 bits (1029), Expect = e-109,   Method: Composition-based stats.
 Identities = 103/416 (24%), Positives = 191/416 (45%), Gaps = 28/416 (6%)

Query: 11  ILSERGFIHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
            + +RG + +I    EL     +       +   +G D TA  +H GH   L  L   Q+
Sbjct: 10  EIIKRG-VAEIVPENELVEKLKKSIARKKPLHIKLGLDPTAPDIHLGHTVVLQKLRQFQE 68

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHK   ++G  T+ IGDP+ + E+R+ +  +E+++N    K      +          +
Sbjct: 69  LGHKVTIILGDYTARIGDPTGKSETRKQLTEEEVRKNAATYKEQIFKILDPAKTN----V 124

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           + N  WL S+ + D++  + + ++V RML  +    R   EQ +S  EF Y ++Q YD V
Sbjct: 125 VFNSQWLASLSFADII-NLAAKYTVARMLERDDFAKRFANEQPISIHEFFYPLMQGYDSV 183

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGA 244
            L    +  +++GG+DQ  N++ G  L +        AL  P+L    G  KM K+L   
Sbjct: 184 AL----EADVELGGTDQKFNLLMGRHLQKEYGQEPQVALMMPILEGLDGVQKMSKSLGNY 239

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSE---IDRMAKLQGKEINEAKKI 301
           I + +   SP   +    +I D  ++ + + +T + ++E   I+   K       + K  
Sbjct: 240 IGITE---SPREMYGKTMSIADELMIRYFELVTPVSLAEIRDIEEGMKNGALHPRDVKMR 296

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAG 360
           +A EI TM HGRE A KA       F        +P   + K+++  G + L  L+  AG
Sbjct: 297 LAREIVTMYHGREAALKAEEEFKSIFQKKELPDEIPEYVLDKNQLEEGEIWLPKLMALAG 356

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             +S++E RR +    +++N+  + +   +++ ++      + +  GK+  +   +
Sbjct: 357 LVSSSSEGRRLVIQGGVRVNDKKVVDPAAKVQPEN-----GMIIKAGKRKFVKIVV 407


>gi|165924084|ref|ZP_02219916.1| tyrosyl-tRNA synthetase [Coxiella burnetii RSA 334]
 gi|165916461|gb|EDR35065.1| tyrosyl-tRNA synthetase [Coxiella burnetii RSA 334]
          Length = 399

 Score =  400 bits (1029), Expect = e-109,   Method: Composition-based stats.
 Identities = 101/413 (24%), Positives = 190/413 (46%), Gaps = 23/413 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    +  RG +  I     L  L  +  +   +G+D TA  +H GH   L  L   Q  
Sbjct: 6   EAFEEIK-RGAVEIIREDELLSRLAEEKPLRIKLGFDPTAPDIHLGHTVVLNKLRQFQTL 64

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+ I L+G  T++IGDP+ ++ +R+ +  + + EN +  +      +     +    + 
Sbjct: 65  GHEVIFLIGDFTAMIGDPTGKNITRQPLTREIVMENTKTYETQAFRILDPDKTQ----VT 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           +N TW+  +K  DL+R + + ++V RML  +    R   +Q ++  EF Y +LQ YD V 
Sbjct: 121 SNSTWINKLKADDLVR-LAATYTVARMLERDDFNKRYLSQQPIAIHEFLYPLLQGYDSVA 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAI 245
           L  +    +++GG+DQ  N++ G +L +         LT PLL    G  KM K+L+  I
Sbjct: 180 LKAD----VELGGTDQKFNLLVGRELQKHFGQRPQCVLTVPLLEGLDGIQKMSKSLNNYI 235

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIA 303
            + +    P   +    +I D  +  + + L+  PM EI+R  +   +G+   + K ++A
Sbjct: 236 GITEP---PEEMFGKVMSISDELMWCYYELLSFRPMREINRWREEVSEGRNPRDIKILLA 292

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
            E+ T  H +E A KA    ++ F        +  I ++ +  +  + +  ++ +AG   
Sbjct: 293 EELVTRFHSKEAATKAHQHFIDRFKRHELPTDLDEIELTAE--NTHLTIGYILQRAGLVN 350

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +T+E  R +   A++I+   + + KL I         +     GK+      +
Sbjct: 351 TTSEGLRMIAQGAVRIDGERVEDIKLAIP-----RGESHLFQVGKRRFAKVKV 398


>gi|126338727|ref|XP_001377352.1| PREDICTED: hypothetical protein [Monodelphis domestica]
          Length = 609

 Score =  400 bits (1029), Expect = e-109,   Method: Composition-based stats.
 Identities = 125/425 (29%), Positives = 207/425 (48%), Gaps = 24/425 (5%)

Query: 15  RGFIHQISNPR----ELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           RG    I   +    EL  L + G  T Y G+D TASSLH GHL  ++ L   Q+ GH  
Sbjct: 181 RGLFADIFPAKGVAPELPELLAGGAQTVYCGFDPTASSLHVGHLLPVLGLLHFQRAGHHV 240

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSF-------IKYGTGKTDA 123
           I+++GG T+ +GDPS R + R  + ++ +++N + ++                G      
Sbjct: 241 IAVVGGATARLGDPSGRSKERTALSAERVRDNAKALRASLEQLAAEHRRLFHDGRPWGTF 300

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            +L+N  W   +  +D L  +G  F +  +LS  SV++RL   + +S  EF Y +LQAYD
Sbjct: 301 TVLDNAAWYSHLALVDFLGAVGGSFRMGPLLSRHSVQARLGSPEGMSLAEFLYPVLQAYD 360

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F  L + Y CR+Q+GGSDQ GNI+ G +   R+    +F +T PL+T+ +G K+GK+   
Sbjct: 361 FYHLHQRYGCRVQLGGSDQLGNIMSGHEFVRRVTGKDVFGITVPLITSTAGAKLGKSAGN 420

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKKI 301
           A+WL++E+TSP+ F+Q++    D  V  + K  T LP+ EI+ + ++     E    +  
Sbjct: 421 AVWLHRELTSPFEFYQFFVRQPDDCVERYLKLFTFLPLPEIEHIMQMHMKAPEKRGPQIR 480

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHM----------PTISISKDEVSRGMG 351
           +ATE+T  VHG+E    A       +  SI +  +               S+  +  G  
Sbjct: 481 LATEVTKFVHGQEGLGSAKRCTQALYHCSIDALEIMSDEELKELFKEAPFSELVLEPGTS 540

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL-QDFDSTGNIKLSFGKKN 410
           +L    KA          + +    + IN+  ++N +  + + +     G   L  GK+N
Sbjct: 541 VLDTCRKANAIPDGPRGYQMITEGGVSINHKPVTNPESVLVVGEHILKNGLSLLKIGKRN 600

Query: 411 HIICH 415
             +  
Sbjct: 601 FYVIK 605


>gi|126338735|ref|XP_001377943.1| PREDICTED: hypothetical protein [Monodelphis domestica]
          Length = 637

 Score =  400 bits (1029), Expect = e-109,   Method: Composition-based stats.
 Identities = 125/425 (29%), Positives = 207/425 (48%), Gaps = 24/425 (5%)

Query: 15  RGFIHQISNPR----ELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           RG    I   +    EL  L + G  T Y G+D TASSLH GHL  ++ L   Q+ GH  
Sbjct: 209 RGLFADIFPAKGVAPELPELLAGGAQTVYCGFDPTASSLHVGHLLPVLGLLHFQRAGHHV 268

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSF-------IKYGTGKTDA 123
           I+++GG T+ +GDPS R + R  + ++ +++N + ++                G      
Sbjct: 269 IAVVGGATARLGDPSGRSKERTALSAERVRDNAKALRASLEQLAAEHRRLFHDGRPWGTF 328

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            +L+N  W   +  +D L  +G  F +  +LS  SV++RL   + +S  EF Y +LQAYD
Sbjct: 329 TVLDNAAWYSHLALVDFLGAVGGSFRMGPLLSRHSVQARLGSPEGMSLAEFLYPVLQAYD 388

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
           F  L + Y CR+Q+GGSDQ GNI+ G +   R+    +F +T PL+T+ +G K+GK+   
Sbjct: 389 FYHLHQRYGCRVQLGGSDQLGNIMSGHEFVRRVTGKDVFGITVPLITSTAGAKLGKSAGN 448

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKKI 301
           A+WL++E+TSP+ F+Q++    D  V  + K  T LP+ EI+ + ++     E    +  
Sbjct: 449 AVWLHRELTSPFEFYQFFVRQPDDCVERYLKLFTFLPLPEIEHIMQMHMKAPEKRGPQIR 508

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHM----------PTISISKDEVSRGMG 351
           +ATE+T  VHG+E    A       +  SI +  +               S+  +  G  
Sbjct: 509 LATEVTKFVHGQEGLGSAKRCTQALYHCSIDALEIMSDEELKELFKEAPFSELVLEPGTS 568

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL-QDFDSTGNIKLSFGKKN 410
           +L    KA          + +    + IN+  ++N +  + + +     G   L  GK+N
Sbjct: 569 VLDTCRKANAIPDGPRGYQMITEGGVSINHKPVTNPESVLVVGEHILKNGLSLLKIGKRN 628

Query: 411 HIICH 415
             +  
Sbjct: 629 FYVIK 633


>gi|153207575|ref|ZP_01946258.1| tyrosyl-tRNA synthetase [Coxiella burnetii 'MSU Goat Q177']
 gi|212218024|ref|YP_002304811.1| tyrosyl-tRNA synthetase [Coxiella burnetii CbuK_Q154]
 gi|120576543|gb|EAX33167.1| tyrosyl-tRNA synthetase [Coxiella burnetii 'MSU Goat Q177']
 gi|212012286|gb|ACJ19666.1| tyrosyl-tRNA synthetase [Coxiella burnetii CbuK_Q154]
          Length = 399

 Score =  400 bits (1028), Expect = e-109,   Method: Composition-based stats.
 Identities = 101/413 (24%), Positives = 190/413 (46%), Gaps = 23/413 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    +  RG +  I     L  L  +  +   +G+D TA  +H GH   L  L   Q  
Sbjct: 6   EAFEEIK-RGAVEIIHEDELLSRLAEEKPLRIKLGFDPTAPDIHLGHTVVLNKLRQFQTL 64

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+ I L+G  T++IGDP+ ++ +R+ +  + + EN +  +      +     +    + 
Sbjct: 65  GHEVIFLIGDFTAMIGDPTGKNITRQPLTREIVMENTKTYETQAFRILDPDKTQ----VT 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           +N TW+  +K  DL+R + + ++V RML  +    R   +Q ++  EF Y +LQ YD V 
Sbjct: 121 SNSTWINKLKADDLVR-LAATYTVARMLERDDFNKRYLSQQPIAIHEFLYPLLQGYDSVA 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAI 245
           L  +    +++GG+DQ  N++ G +L +         LT PLL    G  KM K+L+  I
Sbjct: 180 LKAD----VELGGTDQKFNLLVGRELQKHFGQRPQCVLTVPLLEGLDGIQKMSKSLNNYI 235

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIA 303
            + +    P   +    +I D  +  + + L+  PM EI+R  +   +G+   + K ++A
Sbjct: 236 GITEP---PEEMFGKVMSISDELMWCYYELLSFRPMREINRWREEVSEGRNPRDIKILLA 292

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
            E+ T  H +E A KA    ++ F        +  I ++ +  +  + +  ++ +AG   
Sbjct: 293 EELVTRFHSKEAATKAHQHFIDRFKRHELPTDLDEIELTAE--NTHLTIGYILQRAGLVN 350

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +T+E  R +   A++I+   + + KL I         +     GK+      +
Sbjct: 351 TTSEGLRMIAQGAVRIDGERVEDIKLAIP-----RGESHLFQVGKRRFAKVKV 398


>gi|269966929|ref|ZP_06181001.1| tyrosyl-tRNA synthetase [Vibrio alginolyticus 40B]
 gi|269828412|gb|EEZ82674.1| tyrosyl-tRNA synthetase [Vibrio alginolyticus 40B]
          Length = 395

 Score =  400 bits (1028), Expect = e-109,   Method: Composition-based stats.
 Identities = 97/419 (23%), Positives = 179/419 (42%), Gaps = 28/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M + ++    I  +RG    I     +  L     +   +G D TA  +H GH      L
Sbjct: 1   MASIEAALAEI--KRGVEELIPEEELIAKLKEDRPLRIKLGADPTAPDIHLGHTVIFNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+   L+G  T+++GDP+ ++ +R  +  +++  N E  K      +     K
Sbjct: 59  RLFQELGHEVTFLIGDFTAMVGDPTGKNTTRPPLSREDVLRNAETYKEQVFKILDPAKTK 118

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N  WL  +    ++R + +  +V RML  +  + R    Q ++  EF Y +LQ
Sbjct: 119 ----IQFNSEWLSELGAEGMIR-LAANQTVARMLERDDFKKRYAGGQPIAIHEFMYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGK 239
            +D V +    +  +++GG+DQ  N++ G +L +         L  PLL    G  KM K
Sbjct: 174 GWDSVAM----ETDVELGGTDQKFNLLMGRELQKSHGQKPQVVLMMPLLVGLDGEKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINE 297
           + +  I +++   +P   +    +I D  + S+ + L+  P+ EI +       GK   +
Sbjct: 230 SANNYIGISE---APSEMFGKIMSISDDLMWSYYELLSFRPLEEIAQFKADVEAGKNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A EI    H   +A+ A    +  F  +     MP       +   G  +  L+ 
Sbjct: 287 IKVLLAKEIIARFHSEYDADAAEQEFVNRFAKNQIPDEMPEF-----DFDAGRPVSNLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +AG   S+++A R +K  A+KI+   I++ K   +       G      GK+      +
Sbjct: 342 EAGLCPSSSDAMRMVKQGAVKIDGEKIADSKFAPEA------GTYVFQVGKRKFARITI 394


>gi|39930579|ref|NP_937889.1| tyrosyl-tRNA synthetase, mitochondrial precursor [Mus musculus]
 gi|50401561|sp|Q8BYL4|SYYM_MOUSE RecName: Full=Tyrosyl-tRNA synthetase, mitochondrial; AltName:
           Full=Tyrosine--tRNA ligase; Short=TyrRS; Flags:
           Precursor
 gi|37805338|gb|AAH60295.1| Tyrosyl-tRNA synthetase 2 (mitochondrial) [Mus musculus]
          Length = 472

 Score =  400 bits (1028), Expect = e-109,   Method: Composition-based stats.
 Identities = 134/432 (31%), Positives = 207/432 (47%), Gaps = 29/432 (6%)

Query: 13  SERGFIHQISNP----RELDILCS-----QGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
             RG   +         EL  L           T Y G+D T  SLH GHL  L+ LF  
Sbjct: 37  RARGLFKEFFPESGTKTELPELFDRRRAGSSPQTVYCGFDPTGDSLHVGHLLTLLGLFHF 96

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI-------EKIKGIFSSFIKY 116
           Q+ GH  I+L+GG T+++GDPS R + R  + ++ ++ N        E +    +     
Sbjct: 97  QRAGHNVIALVGGSTALLGDPSGRTKGREALSAECVRANAHALRRGLEALAANHARLFAD 156

Query: 117 GTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNY 176
           G       +L+N  W      +D L  +G  F +  +LS  SV+SRLK  + +S  EF Y
Sbjct: 157 GRPWGSFTVLDNAAWFQEQHLVDFLATVGGHFRMGTLLSRLSVQSRLKSPEGMSLAEFFY 216

Query: 177 MILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTK 236
            +LQAYDF  L ++Y CR+Q+GGSDQ GNI+ G +   +L    +F +T PL+T+ +G K
Sbjct: 217 QVLQAYDFYYLFQHYGCRVQLGGSDQLGNIMSGYEFIHKLTGEDVFGITVPLITSTTGAK 276

Query: 237 MGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI- 295
           +GK+   A+WLN+E TSP+  +Q++    D  V  + K  T LP+ EID + +L  KE  
Sbjct: 277 LGKSAGNAVWLNREKTSPFELYQFFVRQQDDSVERYLKLFTFLPLPEIDHIMQLHVKEPE 336

Query: 296 -NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM----------PTISISKD 344
              A+K +A E+T +VHG+E  + A       +  SI +  +             S S+ 
Sbjct: 337 KRVAQKRLAAEVTKLVHGQEGLDSAKRCTQALYHSSIEALEVMSDQELKELFKEASFSEL 396

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL-QDFDSTGNIK 403
            +  G  ++    KA          R +    + IN+  ++N +  + + Q     G   
Sbjct: 397 VLDPGTSVIDTCRKANAIPDGPRGYRMITEGGVSINHRQVTNPESVLVIGQHILKNGLSL 456

Query: 404 LSFGKKNHIICH 415
           L  GK+N  I  
Sbjct: 457 LKIGKRNFYIIK 468


>gi|221202301|ref|ZP_03575335.1| tyrosyl-tRNA synthetase [Burkholderia multivorans CGD2M]
 gi|221209115|ref|ZP_03582109.1| tyrosyl-tRNA synthetase [Burkholderia multivorans CGD2]
 gi|221171019|gb|EEE03472.1| tyrosyl-tRNA synthetase [Burkholderia multivorans CGD2]
 gi|221177875|gb|EEE10288.1| tyrosyl-tRNA synthetase [Burkholderia multivorans CGD2M]
          Length = 454

 Score =  400 bits (1028), Expect = e-109,   Method: Composition-based stats.
 Identities = 98/416 (23%), Positives = 186/416 (44%), Gaps = 31/416 (7%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           K     +L E  F  +++         +   +   +G D TA  +H GH   L  +  LQ
Sbjct: 66  KRGVDELLIEEEFAQKLA-----RSAATGKPLRIKLGLDPTAPDIHIGHTVVLNKMRQLQ 120

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GH  I L+G  TS+IGDPS R+ +R  +  ++I+ N +      +  +     +    
Sbjct: 121 DLGHTVIFLIGDFTSLIGDPSGRNATRPPLTREQIEANAKTYFEQAALVLDRDKTE---- 176

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           +  N  W   +    +++ + S ++V R+L  E    R +    +S  EF Y ++Q YD 
Sbjct: 177 IRYNSEWSMPLGADGMIK-LASRYTVARILEREDFTKRFQGGVPISIHEFLYPLMQGYDS 235

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSG 243
           V L  +    L++GG+DQ  N++ G +L ++    +   LT PLL    G  KM K+   
Sbjct: 236 VALNAD----LELGGTDQKFNLLVGRELQKQYGQEQQCILTMPLLEGLDGVEKMSKSKGN 291

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKI 301
            + ++++   P + +    +I D  +  + + L+   M EI   +     G+   + K +
Sbjct: 292 YVGISEK---PTDMFGKLMSISDTLMWRYFELLSFRSMDEIAGFKREAEGGRNPRDFKVM 348

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGF 361
           +A EI    H + +AE+A                +P++S++       + +  L+ +AG 
Sbjct: 349 LAQEIVARFHSQADAERALEDF-NHRAKGGVPDDIPSVSLA----GAPLAIGQLLKQAGL 403

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
             ST+EA R+++   +KI+ + +S++ L++        G   +  GK+      L 
Sbjct: 404 VPSTSEALRNIEQGGVKIDGTTVSDKGLKVDA------GEYVVQVGKRRFARVTLA 453


>gi|121997667|ref|YP_001002454.1| tyrosyl-tRNA synthetase [Halorhodospira halophila SL1]
 gi|121589072|gb|ABM61652.1| tyrosyl-tRNA synthetase [Halorhodospira halophila SL1]
          Length = 400

 Score =  400 bits (1028), Expect = e-109,   Method: Composition-based stats.
 Identities = 101/408 (24%), Positives = 189/408 (46%), Gaps = 24/408 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGV-VTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           L  RG + +I    ELD     G  +    G+D TA  LH GH   +  L   Q  GH+ 
Sbjct: 9   LIRRG-VEEIIPEAELDERLRSGKRLRIKAGFDPTAPDLHLGHTVLINKLRQFQDLGHEV 67

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           + L+G  T+ IGDPS +  +R  +  +E+++N    +    + +          ++ N  
Sbjct: 68  LFLIGDFTATIGDPSGKSATRPALTPEEVRQNARTYEEQIYAILD----PKRTRLVFNSD 123

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           W+ +++  DL+ ++ S ++V RML  +    R +   +++  EF Y ++Q YD V L   
Sbjct: 124 WMGTMQAGDLI-QLASRYTVARMLERDDFHQRYQAGSAIAIHEFLYPLIQGYDSVAL--- 179

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNK 249
            +  +++GG+DQ  N++ G +L  +        LT PLL    G  KM K+L   + +  
Sbjct: 180 -EADIELGGTDQRFNLLVGRELQRQFGQKPQTVLTMPLLVGLDGHKKMSKSLGNYVGV-- 236

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL---QGKEINEAKKIIATEI 306
              S  + +    +I D  +  + + L+  P  E++ +      +G    +AK  +A E+
Sbjct: 237 -KESAEDIYAKLMSISDDLMWRYFELLSLRPWREVEALQARIRDEGMNPRDAKDALAYEL 295

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
                G  EA++A  A +  F      + +P ++++ DE   G+G+   + +AG   ST+
Sbjct: 296 AERFCGAVEAQRAREAFVARFRHGAVPEDVPQVTLTYDE-QGGVGIAAALKEAGLVGSTS 354

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           E  R ++  A++++   I + K +++     S     L  GK+     
Sbjct: 355 EGLRMVRQGAVRVDGERIEDPKARLE-----SGRAHLLQVGKRRFARV 397


>gi|221133486|ref|ZP_03559791.1| tyrosyl-tRNA synthetase [Glaciecola sp. HTCC2999]
          Length = 399

 Score =  400 bits (1028), Expect = e-109,   Method: Composition-based stats.
 Identities = 103/420 (24%), Positives = 186/420 (44%), Gaps = 24/420 (5%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  +++ F  I  +RG    +     +  L     +    G+D TA  LH GH   +  L
Sbjct: 1   MSDWQNAFNEI--KRGADEILIEDELIARLKEGKPLKIKAGFDPTAPDLHLGHTVLINKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+ I L+G  T +IGDP+ ++ +R+ +  +++  N E  K      +      
Sbjct: 59  RTFQQLGHEVIFLIGDFTGLIGDPTGKNVTRKPLSKEDVLANAETYKEQVFKILDPAKT- 117

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N  W+ ++    +++ + +  +V RML  +  + R    Q ++  EF Y ++Q
Sbjct: 118 ---TVRFNSEWMDALGAAGMIK-LAASQTVARMLERDDFKKRYGNNQPIAIHEFLYPLVQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGK 239
            +D V L  +    +++GG+DQ  N++ G +L +     +   L  PLL    G  KM K
Sbjct: 174 GWDSVALESD----VELGGTDQRFNLLMGRELQKSQGQRQQTVLMMPLLEGLDGVQKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINE 297
           +L+  I +     +P + +    +I D  +  +   L+  P++EID  + A   G    +
Sbjct: 230 SLNNYIGIT---DAPNDMFGKIMSISDDLMWRYFDLLSFRPIAEIDALKAAVEGGANPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K  +A EI    H    AE A    ++ F  +     MP +++  +     MG+  L+ 
Sbjct: 287 TKIELAKEIIARFHDDAAAEGAHQDFIQRFQKNAIPDDMPEVTVHLE--GEAMGIANLLK 344

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            A    ST++A R +K  A+KIN   + + KLQ+  +     G      GK+      L 
Sbjct: 345 AANLVNSTSDAMRMIKQGAVKINGDKVEDTKLQLSEK-----GEAVYQVGKRKFARITLA 399


>gi|91228939|ref|ZP_01262836.1| tyrosyl-tRNA synthetase [Vibrio alginolyticus 12G01]
 gi|91187499|gb|EAS73834.1| tyrosyl-tRNA synthetase [Vibrio alginolyticus 12G01]
          Length = 395

 Score =  400 bits (1028), Expect = e-109,   Method: Composition-based stats.
 Identities = 97/419 (23%), Positives = 179/419 (42%), Gaps = 28/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M + ++    I  +RG    I     +  L     +   +G D TA  +H GH      L
Sbjct: 1   MASIEAALAEI--KRGVEELIPEEELIAKLKEDRPLRIKLGADPTAPDIHLGHTVIFNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+   L+G  T+++GDP+ ++ +R  +  +++  N E  K      +     K
Sbjct: 59  RLFQELGHEVTFLIGDFTAMVGDPTGKNTTRPPLSREDVLRNAETYKEQVFKILDPAKTK 118

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N  WL  +    ++R + +  +V RML  +  + R    Q ++  EF Y +LQ
Sbjct: 119 ----IQFNSEWLSELGAEGMIR-LAANQTVARMLERDDFKKRYAGGQPIAIHEFMYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGK 239
            +D V +    +  +++GG+DQ  N++ G +L +         L  PLL    G  KM K
Sbjct: 174 GWDSVAM----ETDVELGGTDQKFNLLMGRELQKSHGQKPQVVLMMPLLVGLDGEKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINE 297
           + +  I +++   +P   +    +I D  + S+ + L+  P+ EI +       GK   +
Sbjct: 230 SANNYIGISE---APSEMFGKIMSISDDLMWSYYELLSFRPLEEIAQFKADVEAGKNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A EI    H   +A+ A    +  F  +     MP       +   G  +  L+ 
Sbjct: 287 IKVLLAKEIIARFHSESDADAAEQEFVNRFAKNQIPDEMPEF-----DFDAGRPVSNLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +AG   S+++A R +K  A+KI+   I++ K   +       G      GK+      +
Sbjct: 342 EAGLCPSSSDAMRMVKQGAVKIDGEKIADSKFAPEA------GTYVFQVGKRKFARITI 394


>gi|269961967|ref|ZP_06176322.1| tyrosyl-tRNA synthetase [Vibrio harveyi 1DA3]
 gi|269833290|gb|EEZ87394.1| tyrosyl-tRNA synthetase [Vibrio harveyi 1DA3]
          Length = 395

 Score =  400 bits (1028), Expect = e-109,   Method: Composition-based stats.
 Identities = 98/419 (23%), Positives = 176/419 (42%), Gaps = 28/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M + ++    I  +RG    I     +  L     +   +G D TA  +H GH      L
Sbjct: 1   MASIEAALAEI--KRGVEELIPEEELIAKLKEGRPLRIKLGADPTAPDIHLGHTVIFNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+   L+G  T+++GDP+ ++ +R  +  +++  N E  K      +     K
Sbjct: 59  RLFQELGHEVTFLIGDFTAMVGDPTGKNTTRPPLSREDVLRNAETYKEQVFKILDPAKTK 118

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N  WL  +    ++R + +  +V RML  +  + R    Q ++  EF Y +LQ
Sbjct: 119 ----IQFNSEWLSELGAEGMIR-LAANQTVARMLERDDFKKRYAGGQPIAIHEFMYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGK 239
            +D V +    +  +++GG+DQ  N++ G +L +         L  PLL    G  KM K
Sbjct: 174 GWDSVAM----ETDVELGGTDQKFNLLMGRELQKSHGQKPQVVLMMPLLVGLDGEKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINE 297
           +    I +++   +P   +    +I D  + S+ + L+  P+ EI +       GK   +
Sbjct: 230 SSGNYIGISE---APSEMFGKIMSISDDLMWSYYELLSFRPLEEIAQFKADVEAGKNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A EI    H   +A+ A    +  F  +     MP       +   G  +  L+ 
Sbjct: 287 IKVLLAKEIIARFHSEADADAAEQEFVNRFAKNQIPDEMPEF-----DFEAGTPVANLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +AG   ST+EA R +K  A KI    +++ K   +       G      GK+      +
Sbjct: 342 EAGLCASTSEAMRMVKQGAAKIEGEKVADAKFAPEA------GTYVFQVGKRKFARITI 394


>gi|212213297|ref|YP_002304233.1| tyrosyl-tRNA synthetase [Coxiella burnetii CbuG_Q212]
 gi|212011707|gb|ACJ19088.1| tyrosyl-tRNA synthetase [Coxiella burnetii CbuG_Q212]
          Length = 399

 Score =  400 bits (1028), Expect = e-109,   Method: Composition-based stats.
 Identities = 101/413 (24%), Positives = 190/413 (46%), Gaps = 23/413 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    +  RG +  I     L  L  +  +   +G+D TA  +H GH   L  L   Q  
Sbjct: 6   EAFEEIK-RGAVEIIHEDELLSRLAEEKPLRIKLGFDPTAPDIHLGHTVVLNKLRQFQTL 64

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+ I L+G  T++IGDP+ ++ +R+ +  + + EN +  +      +     +    + 
Sbjct: 65  GHEVIFLIGDFTAMIGDPTGKNITRQPLTREIVMENTKTYETQAFRILDPDKTQ----VT 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           +N TW+  +K  DL+R + + ++V RML  +    R   +Q ++  EF Y +LQ YD V 
Sbjct: 121 SNSTWINKLKADDLVR-LAATYTVARMLERDDFNKRYLSQQPIAIHEFLYPLLQGYDSVA 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAI 245
           L  +    +++GG+DQ  N++ G +L +         LT PLL    G  KM K+L+  I
Sbjct: 180 LKAD----VELGGTDQKFNLLVGRELQKHFGQRPQSVLTVPLLEGLDGIQKMSKSLNNYI 235

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIA 303
            + +    P   +    +I D  +  + + L+  PM EI+R  +   +G+   + K ++A
Sbjct: 236 GITEP---PEEMFGKVMSISDELMWRYYELLSFRPMREINRWREEVSEGRNPRDIKILLA 292

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
            E+ T  H +E A KA    ++ F        +  I ++ +  +  + +  ++ +AG   
Sbjct: 293 EELVTRFHSKEAATKAHQHFIDRFKRHELPTDLDEIELTAE--NTHLTIGYILQRAGLVN 350

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +T+E  R +   A++I+   + + KL I         +     GK+      +
Sbjct: 351 TTSEGLRMIAQGAVRIDGERVEDIKLAIP-----RGESHLFQVGKRRFAKVKV 398


>gi|262172293|ref|ZP_06039971.1| tyrosyl-tRNA synthetase [Vibrio mimicus MB-451]
 gi|261893369|gb|EEY39355.1| tyrosyl-tRNA synthetase [Vibrio mimicus MB-451]
          Length = 395

 Score =  400 bits (1028), Expect = e-109,   Method: Composition-based stats.
 Identities = 100/419 (23%), Positives = 174/419 (41%), Gaps = 28/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M + ++    I  +RG    I     +  L     +   +G D TA  +H GH   L  L
Sbjct: 1   MASIEAALAEI--KRGVEELIPEEELIAKLKENRPLKIKLGADPTAPDIHLGHTVILNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GH    L+G  T ++GDP+ ++ +R  +  +++  N E  K      +     K
Sbjct: 59  RTFQDLGHDVTFLIGDFTGMVGDPTGKNTTRPPLTREDVLRNAETYKQQVFKILDPAKTK 118

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N  WL  +    ++R + S  +V RML  +  + R    Q ++  EF Y +LQ
Sbjct: 119 ----IQFNSEWLSQLGAEGMIR-LASNQTVARMLERDDFKKRYNNGQPIAIHEFMYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGK 239
            YD V +    +  +++GG+DQ  N++ G +L +         L  PLL    G  KM K
Sbjct: 174 GYDSVAM----ETDVELGGTDQKFNLLMGRELQKANGQKPQVVLMMPLLVGLDGEKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINE 297
           +    I +++   +P   +    +I D  + S+ + L+  P+ EI +       G    +
Sbjct: 230 SAHNYIGVSE---APSEMFGKIMSISDDLMWSYYELLSFRPLEEIAQFKADVANGTNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A EI    H   +A+ A    +  F      + MP       E   G+ +  L+ 
Sbjct: 287 IKILLAKEIIARFHTEADADAAEQEFINRFQKGAMPEEMPEF-----EFDSGIAISNLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            AG   ST++A R +K  A+K++   + + KL          G      GK+      +
Sbjct: 342 DAGLVASTSDALRMIKQGAVKLDGEKLEDAKLVPAC------GTAVYQVGKRKFARVTI 394


>gi|258625586|ref|ZP_05720472.1| tyrosyl-tRNA synthetase [Vibrio mimicus VM603]
 gi|258582139|gb|EEW07002.1| tyrosyl-tRNA synthetase [Vibrio mimicus VM603]
          Length = 395

 Score =  399 bits (1027), Expect = e-109,   Method: Composition-based stats.
 Identities = 99/419 (23%), Positives = 174/419 (41%), Gaps = 28/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M + ++    I  +RG    I     +  L     +   +G D TA  +H GH   L  L
Sbjct: 1   MASIEAALAEI--KRGVEELIPEEELIAKLKENRPLRIKLGADPTAPDIHLGHTVILNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GH    L+G  T ++GDP+ ++ +R  +  +++  N E  K      +     K
Sbjct: 59  RTFQDLGHDVTFLIGDFTGMVGDPTGKNTTRPPLTREDVLRNAETYKQQVFKILDPAKTK 118

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N  WL  +    ++R + S  +V RML  +  + R    Q ++  EF Y +LQ
Sbjct: 119 ----IQFNSEWLSQLGAEGMIR-LASNQTVARMLERDDFKKRYNNGQPIAIHEFMYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGK 239
            YD V +    +  +++GG+DQ  N++ G +L +         L  PLL    G  KM K
Sbjct: 174 GYDSVAM----ETDVELGGTDQKFNLLMGRELQKANGQKPQVVLMMPLLVGLDGEKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA--KLQGKEINE 297
           +    I +++   +P   +    +I D  + S+ + L+  P+ EI +       G    +
Sbjct: 230 SAHNYIGVSE---APSEMFGKIMSISDELMWSYYELLSFRPLEEIAQFKVDVANGTNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A EI    H   +A+ A    +  F      + +P       E   G+ +  L+ 
Sbjct: 287 IKILLAKEIIARFHTEADADAAEQEFINRFQKGAMPEEIPEF-----EFDSGIAISNLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            AG   ST++A R +K  A+K++   + + KL          G      GK+      +
Sbjct: 342 DAGLVASTSDALRMIKQGAVKLDGEKLEDAKLVPAC------GTAVYQVGKRKFARVTI 394


>gi|171464163|ref|YP_001798276.1| tyrosyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           necessarius STIR1]
 gi|171193701|gb|ACB44662.1| tyrosyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           necessarius STIR1]
          Length = 410

 Score =  399 bits (1027), Expect = e-109,   Method: Composition-based stats.
 Identities = 104/393 (26%), Positives = 177/393 (45%), Gaps = 26/393 (6%)

Query: 28  DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFR 87
               ++  +   +G D TA  +H GH   L  L  LQ  GH  I L+G  TS+IGDPS R
Sbjct: 41  RSQATKTPLRIKLGLDPTAPDIHLGHTVVLNKLRQLQDLGHTVIFLIGDFTSMIGDPSGR 100

Query: 88  DESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSF 147
           + +R  + ++EI  N E      S  +     +    +  N  W   +    ++ ++ + 
Sbjct: 101 NATRPPLTAEEIAINAETYYRQASMVLDPSKTE----VRYNSEWCDPLGARGMI-QLAAR 155

Query: 148 FSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNII 207
           ++V +ML  +    R +    +S  EF Y ++Q YD V L  +    L++GG DQ  N +
Sbjct: 156 YTVAQMLERDDFTKRYRSGVPISVHEFLYPLMQGYDSVALKSD----LELGGIDQKFNFL 211

Query: 208 CGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDD 266
            G +L           LT PLL    G  KM K+    I +++        +    +I D
Sbjct: 212 VGRELQREYGQEPQCILTMPLLVGLDGVDKMSKSKGNYIGISEPAG---EMFGKLLSISD 268

Query: 267 ADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAM 324
             +  +   L+  PM+EID  +     G+   + K ++A EI    H +  AEKA     
Sbjct: 269 DLMWDYFTLLSFRPMAEIDLMKQEVAAGRNPKDCKVLLAQEIVARFHSQAAAEKALEDF- 327

Query: 325 ECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSII 384
                      +P +++S       MG+  L+  AG A ST+EA R+++ N +KI+ + I
Sbjct: 328 NHRAKGGIPDDIPEVNLS----GAPMGIANLLKAAGLAPSTSEANRNIEQNGVKIDGTTI 383

Query: 385 SNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           ++++L+++       GN  +  GK+  +   L 
Sbjct: 384 ADKQLKVEA------GNYVVQVGKRKFVKVTLA 410


>gi|321477483|gb|EFX88442.1| hypothetical protein DAPPUDRAFT_305427 [Daphnia pulex]
          Length = 459

 Score =  399 bits (1027), Expect = e-109,   Method: Composition-based stats.
 Identities = 132/433 (30%), Positives = 210/433 (48%), Gaps = 24/433 (5%)

Query: 6   SDFLSILSERGFIHQISNPRELD-ILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           S+ L  L+ERG +  +  P  L            Y G+D TA SLH G+L  LM +   Q
Sbjct: 25  SNVLK-LNERGLLQDVFPPPSLALQKLLSQPQCFYAGFDPTADSLHIGNLLVLMTMLHCQ 83

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI----EKIKGIFSSFIKYGTGK 120
           + GH+ I+L+GG T++IGDPS +   R  +  + ++EN     E I  IF +  KY   K
Sbjct: 84  RAGHQTIALIGGATALIGDPSGKSSERIALPEENVKENTNVIGENITRIFQNHQKYIWEK 143

Query: 121 T-----DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFN 175
                    ++NN  W  ++     L   G  F V  MLS  SV+SR+  E  +SF EF+
Sbjct: 144 NRGPLKPVKLVNNADWYNNVSITKFLSTAGRHFRVGAMLSRNSVQSRINSESGISFTEFS 203

Query: 176 YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT 235
           Y +LQ YD++ L + Y CR Q+GGSDQ GNI+ G +L  R+   ++F LT PL+T  +G+
Sbjct: 204 YQVLQGYDWLHLLQKYKCRFQIGGSDQMGNIVSGHELISRMGLEEVFGLTIPLVTNEAGS 263

Query: 236 KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI 295
           K+GKT   A+W+    TSPY  +Q++  + D++V    K  T     EI  + + Q  + 
Sbjct: 264 KLGKTAGNAVWITPSKTSPYELYQFFMRVKDSEVEQLLKLFTFCSTDEISTIMEKQTNKP 323

Query: 296 --NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISK 343
               A + +A ++T +VHG    + A       +  S  S          +     ++  
Sbjct: 324 ESRVAHRKLAQQVTLLVHGENGLKSAERITEALYSKSADSLARLQPSELNETFRGATMVD 383

Query: 344 DEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ-DFDSTGNI 402
             +     +L +++KA    + N+ARR + +  + IN    ++    + L       G  
Sbjct: 384 ILLEPATSVLDMVMKANCFANENDARRIILAGGLHINQVKCTDYTEILSLGRHILPNGIS 443

Query: 403 KLSFGKKNHIICH 415
            +  GKK++ I  
Sbjct: 444 LIRVGKKHYYIIK 456


>gi|297568891|ref|YP_003690235.1| tyrosyl-tRNA synthetase [Desulfurivibrio alkaliphilus AHT2]
 gi|296924806|gb|ADH85616.1| tyrosyl-tRNA synthetase [Desulfurivibrio alkaliphilus AHT2]
          Length = 403

 Score =  399 bits (1027), Expect = e-109,   Method: Composition-based stats.
 Identities = 100/408 (24%), Positives = 180/408 (44%), Gaps = 27/408 (6%)

Query: 15  RGFIHQISNPRELDILCSQG----VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           RG +  +S       L         +    G+D TA  LH GH   +  +   Q  GH+ 
Sbjct: 12  RGAVQVVSPEDLRKKLLRAEETGVPLRVKAGFDPTAPDLHLGHTVLIQKMKHFQDLGHQI 71

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           + L+G  T  IGDP+ + E+R+ + ++++  N E  K      +     +    ++ N +
Sbjct: 72  LFLIGDFTGRIGDPTGKSETRKPLSAEDVARNAETYKEQVFKILDPDKTQ----VVFNSS 127

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           WL  +   D ++ + +  +V RML  E  + R   E+ +   EF Y ++Q YD V L  +
Sbjct: 128 WLNELSSQDFIK-LAAQLTVARMLEREDFKQRFVNEKPIGVHEFLYPLIQGYDSVALKAD 186

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNK 249
               +++GG+DQ  N++ G DL           +T PLL    G  KM K+L+  I + +
Sbjct: 187 ----IELGGTDQLFNLLTGRDLQRVWGQDPQVVITMPLLEGLDGVNKMSKSLANYIGICE 242

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR---MAKLQGKEINEAKKIIATEI 306
                 + +    ++ D+ +  + + L+ L  +EIDR     +       E K+ +A E+
Sbjct: 243 NAD---DIYGKTMSMPDSLMFRYYELLSDLSPAEIDRLKAEMEAGRAHPKEVKQQLAREL 299

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
           T   HG++ A++AA    + F      + +P I++   +  + + L  L+V AG    T 
Sbjct: 300 TARFHGQDAAQRAAANFDKVFKQHELPEDLPEITLPAGD--QAVWLPRLLVDAGLVKGTG 357

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           EARR +   A+ +N        +        + G + L  GK+     
Sbjct: 358 EARRMIGQQAVSVNGEK-----VAEVEATVAAAGEVLLKVGKRRFCRV 400


>gi|262163955|ref|ZP_06031694.1| tyrosyl-tRNA synthetase [Vibrio mimicus VM223]
 gi|262027483|gb|EEY46149.1| tyrosyl-tRNA synthetase [Vibrio mimicus VM223]
          Length = 395

 Score =  399 bits (1027), Expect = e-109,   Method: Composition-based stats.
 Identities = 100/419 (23%), Positives = 174/419 (41%), Gaps = 28/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M + ++    I  +RG    I     +  L     +   +G D TA  +H GH   L  L
Sbjct: 1   MASIEAALAEI--KRGVEELIPEEELIAKLKENRPLRIKLGADPTAPDIHLGHTVILNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GH    L+G  T ++GDP+ ++ +R  +  +++  N E  K      +     K
Sbjct: 59  RTFQDLGHDVTFLIGDFTGMVGDPTGKNTTRPPLTREDVLRNAETYKQQVFKILDPAKTK 118

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N  WL  +    ++R + S  +V RML  +  + R    Q ++  EF Y +LQ
Sbjct: 119 ----IQFNSEWLSQLGAEGMIR-LASNQTVARMLERDDFKKRYNNGQPIAIHEFMYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGK 239
            YD V +    +  +++GG+DQ  N++ G +L +         L  PLL    G  KM K
Sbjct: 174 GYDSVAM----ETDVELGGTDQKFNLLMGRELQKANGQKPQVVLMMPLLVGLDGEKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINE 297
           +    I +++   +P   +    +I D  + S+ + L+  P+ EI +       G    +
Sbjct: 230 SAHNYIGVSE---APSEMFGKIMSISDDLMWSYYELLSFRPLEEIAQFKADVANGTNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A EI    H   +A+ A    +  F      + MP       E   G+ +  L+ 
Sbjct: 287 IKILLAKEIIARFHTEADADAAEQEFINRFQKGAMPEEMPEF-----EFDSGIAISNLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            AG   ST++A R +K  A+K++   + + KL          G      GK+      +
Sbjct: 342 DAGLVASTSDALRMIKQGAVKLDGEKLEDAKLIPAC------GTAVYQVGKRKFARVTI 394


>gi|323492029|ref|ZP_08097194.1| tyrosyl-tRNA synthetase [Vibrio brasiliensis LMG 20546]
 gi|323313758|gb|EGA66857.1| tyrosyl-tRNA synthetase [Vibrio brasiliensis LMG 20546]
          Length = 395

 Score =  399 bits (1027), Expect = e-109,   Method: Composition-based stats.
 Identities = 96/419 (22%), Positives = 177/419 (42%), Gaps = 28/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M + ++    I  +RG    I     +  L     +   +G D TA  +H GH      L
Sbjct: 1   MASIEAALAEI--KRGVDELIPEEELIAKLKEGRPLRIKLGADPTAPDIHLGHTVIFNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH    L+G  T+++GDP+ ++ +R  +  +++  N E  K      +     K
Sbjct: 59  RAFQELGHDVTFLIGDFTAMVGDPTGKNSTRPPLSREDVLRNAETYKEQVFKILDPAKTK 118

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N  WL  +    ++R + +  +V RML  +  + R    Q ++  EF Y +LQ
Sbjct: 119 ----IQFNSEWLSELGAEGMIR-LAANQTVARMLERDDFKKRYAGGQPIAIHEFMYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGK 239
            YD V +    +  +++GG+DQ  N++ G +L +         L  PLL    G  KM K
Sbjct: 174 GYDSVAM----ETDVELGGTDQKFNLLMGRELQKANGQKPQVVLMMPLLVGLDGEKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINE 297
           + +  I +++   +P   +    +I D  + ++   L+  P+ E+ ++      G+   +
Sbjct: 230 SANNYIGISE---APSEMFGKIMSISDDLMWNYYDLLSFRPLDEVAQLKADVAAGQNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K  +A EI    H + +A+ A    +  F  +     MP       E   G+ +  L+ 
Sbjct: 287 VKVALAKEIIARFHSQADADAAEQEFVNRFAKNQIPDEMPEF-----EFEAGLPVSNLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +A    ST+EA R +K  A KI+   +++ K   +       G      GK+      +
Sbjct: 342 EAALCASTSEAMRMVKQGAAKIDGEKVADSKFAPQA------GTYVFQVGKRKFARITI 394


>gi|302389946|ref|YP_003825767.1| tyrosyl-tRNA synthetase [Thermosediminibacter oceani DSM 16646]
 gi|302200574|gb|ADL08144.1| tyrosyl-tRNA synthetase [Thermosediminibacter oceani DSM 16646]
          Length = 400

 Score =  399 bits (1027), Expect = e-109,   Method: Composition-based stats.
 Identities = 108/415 (26%), Positives = 187/415 (45%), Gaps = 31/415 (7%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
            K + + I+ E   ++++          ++  +   +G D TA  +H GH   L  +   
Sbjct: 10  LKQNAVEIIFEEELLNKLK-----RSYETKKPLRVKLGLDPTAPDVHLGHAVVLKKMRQF 64

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q  GH+ I L+G  T +IGDP+ + E+R+ +  +EI EN    K      +  G  +   
Sbjct: 65  QDLGHEVILLIGDFTGMIGDPTGKSETRKQLSREEIMENARTYKEQVFKILDPGKTR--- 121

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            +  N  WL  + + D+L+ + S ++V RML  E    R K  + +S  EF Y ++Q YD
Sbjct: 122 -IAFNSEWLGRMSFEDVLK-LASKYTVARMLEREDFSQRFKEGRPISIHEFFYPLMQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLS 242
            V L    +  +++G ++Q  NI+ G  L +        A+  P+L    G  KM K+L 
Sbjct: 180 SVAL----EADVELGATEQKFNILMGRTLQKEYGQEPQVAMLMPILVGIDGKRKMSKSLG 235

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAK 299
             I +++    P   +    +I D  ++ + +  T +   EID++    K       +AK
Sbjct: 236 NYIGVSE---PPDEMYGKVMSIPDEVMMEYYRLATYVDPEEIDKIEKGIKEGNINPRDAK 292

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKA 359
             +A EI  + HG EEA +A    +  F        +P   I + +V     L  L+  +
Sbjct: 293 MRLAREIVKIYHGDEEALRAEENFVRVFQKKDLPDEIPEFKIDEGKV----WLPKLMTLS 348

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           G  +S +EA R +K  A+KIN   IS+        D + +  + L  GK+  +  
Sbjct: 349 GLCSSNSEALRMIKQGAVKINGEKISD------AMDLEISSPVVLQVGKRKFVRV 397


>gi|29840193|ref|NP_829299.1| tyrosyl-tRNA synthetase [Chlamydophila caviae GPIC]
 gi|75539675|sp|Q823H9|SYY_CHLCV RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|29834541|gb|AAP05177.1| tyrosyl-tRNA synthetase [Chlamydophila caviae GPIC]
          Length = 412

 Score =  399 bits (1026), Expect = e-109,   Method: Composition-based stats.
 Identities = 141/424 (33%), Positives = 220/424 (51%), Gaps = 29/424 (6%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           DF+  L +RG +   S+   LD +  +  ++AY+G+D TA+SLH GH   +  L  +   
Sbjct: 3   DFIKHLKDRGILEDFSH--GLDSV--ESPISAYLGFDPTAASLHIGHWIGICFLRRMASF 58

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           G  P++L+G  T +IGDPS +   R ++ S E+  N +K+    S ++          ++
Sbjct: 59  GITPVALVGSATGMIGDPSGKSIERTLLESNEVAHNSKKLSECLSHYL------PGVQIV 112

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W      ID LR++G  F +  ML  ++++ R++ E+ +S+ EF+Y++LQ+YDF  
Sbjct: 113 NNMEWFQGTTVIDFLRDVGKHFRLGTMLGKDTIKQRIQSEEGISYTEFSYILLQSYDFAH 172

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + +   LQ GGSDQWGNI  GID   R    + + LT PLLT + G K+GKT SG IW
Sbjct: 173 LFEKHGIALQCGGSDQWGNITSGIDYIRRKGLGQAYGLTYPLLTNSQGKKIGKTESGTIW 232

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           L+  +TSPY  +QY+  + DA+V   A+ LT L   EI  + K    +    KK +   I
Sbjct: 233 LDPTLTSPYELYQYFLRLPDAEVPKIARTLTLLSNEEIFDLDKKFLSDPIAVKKFVTETI 292

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS-------------ISKDEVSR-GMGL 352
            T +HG +  +KA          S+H   + +IS             IS D V   G   
Sbjct: 293 VTSIHGEDGLKKAQMVT-----QSMHPGKVSSISEKDFQDLISMGQGISLDRVQTLGKRW 347

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           + L V  GF  S  EARR ++   + +N+  I++E    + +       + L+ GKK  +
Sbjct: 348 IDLFVGVGFCNSKGEARRLIEQKGLYVNSEPIADEHSVFEERQVCYDQYVLLAQGKKKKL 407

Query: 413 ICHL 416
           + HL
Sbjct: 408 VLHL 411


>gi|148979044|ref|ZP_01815289.1| tyrosyl-tRNA synthetase [Vibrionales bacterium SWAT-3]
 gi|145962017|gb|EDK27305.1| tyrosyl-tRNA synthetase [Vibrionales bacterium SWAT-3]
          Length = 395

 Score =  399 bits (1026), Expect = e-109,   Method: Composition-based stats.
 Identities = 101/420 (24%), Positives = 182/420 (43%), Gaps = 30/420 (7%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLML 59
           M + ++    I  +RG + ++    EL     +G  +   +G D TA  +H GH      
Sbjct: 1   MASIEAALAEI--KRG-VEELIPEDELIAKLKEGRPLRIKLGADPTAPDIHLGHTVIFNK 57

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG 119
           L   Q+ GH+   L+G  T+++GDPS ++ +R  +  +++ +N E  K      +     
Sbjct: 58  LRAFQELGHEVTFLIGDFTAMVGDPSGKNSTRPPLSREDVLKNAETYKEQVFKILDPAKT 117

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
           +    +  N  WL  +    ++R + S  +V RML  +  + R    Q ++  EF Y +L
Sbjct: 118 Q----IRFNSEWLSDLGAEGMIR-LASNQTVARMLERDDFKKRYAGGQPIAIHEFMYPLL 172

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMG 238
           Q +D V L  +    +++GG+DQ  N++ G +L +         L  PLL    G  KM 
Sbjct: 173 QGHDSVALESD----VELGGTDQKFNLLMGRELQKAAGQKPQAVLMMPLLVGLDGVKKMS 228

Query: 239 KTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEIN 296
           K+    I +++   +P   +    +I D  + S+ + L+  P+ E+  +      GK   
Sbjct: 229 KSAHNYIGISE---APSEMFGKIMSISDDLMWSYYELLSFRPLEEVAELKAGVEAGKNPR 285

Query: 297 EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLI 356
           + K I+A EI    H   +A+ A    +  F  +     MP       E   G+ +  ++
Sbjct: 286 DVKVILAKEIIARFHSEADADAAEQEFVNRFAKNQVPDDMPEF-----EFEAGLPIANVL 340

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            +AG   ST++A R +K  A KI    + + KL  +       G      GK+      +
Sbjct: 341 KEAGLVNSTSDAMRMIKQGAAKIEGEKVEDNKLVPEA------GTAVYQVGKRKFARITI 394


>gi|325983358|ref|YP_004295760.1| Tyrosyl-tRNA synthetase [Nitrosomonas sp. AL212]
 gi|325532877|gb|ADZ27598.1| Tyrosyl-tRNA synthetase [Nitrosomonas sp. AL212]
          Length = 400

 Score =  399 bits (1026), Expect = e-109,   Method: Composition-based stats.
 Identities = 103/414 (24%), Positives = 185/414 (44%), Gaps = 24/414 (5%)

Query: 2   PAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
            + KS     + +RG    +        L S   +    G+D TA  LH GH   L  L 
Sbjct: 3   TSIKSQL--EIIKRGSQELLVETELEAKLVSGHPLRVKAGFDPTAPDLHLGHTVLLNKLR 60

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKT 121
            LQ  GH  + L+G  T +IGDPS ++ +R  +  +++ EN +         +     + 
Sbjct: 61  QLQVMGHHILFLIGDFTGMIGDPSGKNSTRPPLTREQVAENAQSYTTQVFKILNPDQTE- 119

Query: 122 DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA 181
              ++ N TW+  +   DL++   +  +V RML  +    R +  Q+++  EF Y ++Q 
Sbjct: 120 ---VVFNSTWMGKMDAADLIKLAATH-TVARMLERDDFDKRYRNNQAIAIHEFLYPLIQG 175

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKT 240
           YD V L  +    L++GG+DQ  N++ G +L +     +   LT PLL    G  KM K+
Sbjct: 176 YDSVALKAD----LELGGTDQKFNLLMGRELQKHFGQAQQCILTMPLLEGLDGVNKMSKS 231

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEA 298
           L+  + + +   SP   +    ++ D  +  + + L+   +  I +  +    G+   + 
Sbjct: 232 LNNYVGITE---SPAEIFGKLMSVSDQLMWRYLELLSFESLQTIQKWREEVAAGRNPRDI 288

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVK 358
           K I+A E+ T  H R  AE A       F      + +P   I        + L+ ++ +
Sbjct: 289 KVILAQEMVTRFHNRTSAEDALADFEARFKHGALPEEIPEKIIQAP--GSEIPLVQVLKQ 346

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
            G   ST+EA R ++  A+K+NN  I+++ +QI         ++ +  GK+   
Sbjct: 347 TGLTASTSEALRMIEQGAVKLNNEKITDKSIQI-----MRGASVVIQVGKRKFA 395


>gi|149927757|ref|ZP_01916009.1| tyrosyl-tRNA synthetase [Limnobacter sp. MED105]
 gi|149823583|gb|EDM82813.1| tyrosyl-tRNA synthetase [Limnobacter sp. MED105]
          Length = 453

 Score =  399 bits (1026), Expect = e-109,   Method: Composition-based stats.
 Identities = 105/410 (25%), Positives = 187/410 (45%), Gaps = 26/410 (6%)

Query: 10  SILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
            +L E  +I ++ +  +     +   +   +G D TA  +H GH   L  L  LQ  GH+
Sbjct: 66  ELLIESEWIQKLVHSEK-----TGKPLRIKLGLDPTAPDIHLGHTVVLNKLRQLQDLGHQ 120

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
            I L+G  TS+IGDPS R+ +R  +  +++QEN +         +K    +  A +  N 
Sbjct: 121 VIFLIGDFTSMIGDPSGRNSTRPPLTKEQVQENAKTYHEQ---AVKILDPQRTA-IEFNS 176

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
            WL  +    ++R + S ++V RML  +    R +    ++  EF Y +LQ YD V L  
Sbjct: 177 KWLMPLGADGMIR-LASSYTVARMLERDDFTKRYQSGTPIAVHEFLYPLLQGYDSVALES 235

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLN 248
           +    L++GG+DQ  N++ G +L ++        LT PLL    G  KM K+ +  I + 
Sbjct: 236 D----LELGGTDQKFNLLMGRELQKQNGQSAQCILTMPLLVGTDGVDKMSKSKNNYIGVT 291

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEI 306
           +   +P N +    +I D  + ++   L+   +++I+  + A   G+    AK  +A E+
Sbjct: 292 E---TPSNMFGKVMSISDELMWNWYTLLSFKSLADIEALKQACASGENPRNAKVALAQEL 348

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
               H  + A  A       F      + MP I +   E     GL  ++  A    S++
Sbjct: 349 VARFHTPQAAVDALNEFEARFKQGALPEDMPEIKLDLPEGDADAGLAWVLKAASLCESSS 408

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +A R+++   +KI++  IS++  ++        G   +  GK+     HL
Sbjct: 409 DANRNIQQGGVKIDSEKISDKATRL------GKGTYVIQVGKRRFAKVHL 452


>gi|134294761|ref|YP_001118496.1| tyrosyl-tRNA synthetase [Burkholderia vietnamiensis G4]
 gi|134137918|gb|ABO53661.1| tyrosyl-tRNA synthetase [Burkholderia vietnamiensis G4]
          Length = 413

 Score =  399 bits (1026), Expect = e-109,   Method: Composition-based stats.
 Identities = 97/416 (23%), Positives = 187/416 (44%), Gaps = 31/416 (7%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           K     +L E  F  +++         +   +   +G D TA  +H GH   L  +  LQ
Sbjct: 25  KRGVDELLIEEEFAQKLA-----RSAATGKPLRIKLGLDPTAPDIHIGHTVVLNKMRQLQ 79

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GH  I L+G  TS+IGDPS R+ +R  +  ++I+ N +      +  +     +    
Sbjct: 80  DLGHTVIFLIGDFTSLIGDPSGRNATRPPLTREQIESNAKTYFDQAALVLDRDKTE---- 135

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           +  N  W   +    +++ + S ++V R+L  E    R +    +S  EF Y ++Q YD 
Sbjct: 136 IRYNSEWSMPLGADGMIK-LASRYTVARILEREDFTKRFQSGIPISIHEFLYPLMQGYDS 194

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSG 243
           V L  +    L++GG+DQ  N++ G +L ++    +   LT PLL    G  KM K+   
Sbjct: 195 VALNAD----LELGGTDQKFNLLVGRELQKQYGQEQQCILTMPLLEGLDGVEKMSKSKGN 250

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKI 301
            + ++++   P + +    +I D  +  + + L+   + EI   R     G+   + K +
Sbjct: 251 YVGISEK---PTDMFGKLMSISDTLMWRYFELLSFRSLDEIAGFRREAEGGRNPRDFKVL 307

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGF 361
           +A EI    H + +AE+A                +P+++++       + +  L+ +AG 
Sbjct: 308 LAQEIVARFHSQADAERALEDF-NHRAKGGVPDDIPSVTLA----GAPLAIGQLLKQAGL 362

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
             ST+EA R+++   +KI+ + +S++ L++   +F       +  GK+      L 
Sbjct: 363 VPSTSEALRNIEQGGVKIDGATVSDKGLKVDAGEF------VVQVGKRRFARVTLT 412


>gi|301762422|ref|XP_002916632.1| PREDICTED: tyrosyl-tRNA synthetase, mitochondrial-like [Ailuropoda
           melanoleuca]
 gi|281349046|gb|EFB24630.1| hypothetical protein PANDA_004722 [Ailuropoda melanoleuca]
          Length = 477

 Score =  399 bits (1026), Expect = e-109,   Method: Composition-based stats.
 Identities = 133/437 (30%), Positives = 211/437 (48%), Gaps = 28/437 (6%)

Query: 7   DFLSILSERGFIHQISNPR----ELDILCSQG----VVTAYIGYDLTASSLHAGHLTQLM 58
             L++   RG   +    R    EL  L  +G      T Y G+D TA SLH GHL  L+
Sbjct: 37  GLLAVQKARGLFREFFPERGTKIELPELFDRGTGNFPQTIYCGFDPTADSLHVGHLLSLL 96

Query: 59  LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI-------EKIKGIFS 111
            LF  Q+ GH  I+++GG T+ +GDPS R + R  +  + ++ N        E +     
Sbjct: 97  GLFHFQRAGHNVIAVVGGATARLGDPSGRTKEREALEPERVRSNARALRQGLEAMVANHQ 156

Query: 112 SFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSF 171
                G       +L+N  W      +D L  +G  F +  +LS +SV++RLK  + +S 
Sbjct: 157 QLFANGRTWGSFTVLDNSAWYHKQHLVDFLAAVGGQFRMGTLLSRQSVQTRLKSPEGMSL 216

Query: 172 LEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT 231
            EF Y +LQAYDF  L ++Y CR+Q+GGSDQ GNI+ G +   +L    +F +T PL+T+
Sbjct: 217 AEFLYQVLQAYDFYHLFQHYGCRVQLGGSDQLGNIMSGYEFIHKLTGEDVFGITVPLITS 276

Query: 232 ASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ 291
            +G K+GK+   A+WLN++ TSP+  +Q++    D  V  + +  T LP+ EID + +L 
Sbjct: 277 TTGAKLGKSAGNAVWLNRDKTSPFELYQFFVRQQDDTVERYLRLFTFLPLPEIDHLMQLH 336

Query: 292 GKEI--NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM----------PTI 339
            KE      +K +A E+T +VHG+E  + A       +  SI +  +             
Sbjct: 337 DKEPEKRGPQKRLAAEVTKLVHGQEGLDSAKRCTQALYHSSIDALEVMSDQELRELFKEA 396

Query: 340 SISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL-QDFDS 398
           S S+  +  G  +L    KA          R +    + IN+  ++N +  + + Q    
Sbjct: 397 SFSELVLDPGTSVLDTCRKANAIPDGPRGYRMITEGGVSINHKQVTNPESVLVVGQHILK 456

Query: 399 TGNIKLSFGKKNHIICH 415
            G   L  GK+N  +  
Sbjct: 457 NGLSLLKIGKRNFYVIK 473


>gi|218886452|ref|YP_002435773.1| tyrosyl-tRNA synthetase [Desulfovibrio vulgaris str. 'Miyazaki F']
 gi|218757406|gb|ACL08305.1| tyrosyl-tRNA synthetase [Desulfovibrio vulgaris str. 'Miyazaki F']
          Length = 399

 Score =  399 bits (1026), Expect = e-109,   Method: Composition-based stats.
 Identities = 102/409 (24%), Positives = 174/409 (42%), Gaps = 27/409 (6%)

Query: 15  RGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG   ++ +  EL    ++G  +    G+D TA  LH GH   +  L  LQ+ GH  I L
Sbjct: 13  RGM-AELIDEAELRKKIARGAPLRIKAGFDPTAPDLHLGHTVLIHKLRHLQELGHTVIFL 71

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
           +G  T  IGDPS R ++R  +  ++I EN E  K      +     + D     N  W+ 
Sbjct: 72  IGDFTGQIGDPSGRSDTRPPLTPEQILENAETYKKQVFKILDPEKTEVD----FNSRWMN 127

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDC 193
           +    D +R + S ++V RML  +    R +  + ++  EF Y ++Q YD V L  +   
Sbjct: 128 AFSAADFVR-LASRYTVARMLERDDFEKRYRDGRPIAIHEFLYPLVQGYDSVALRAD--- 183

Query: 194 RLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMT 252
            +++GG+DQ  N++ G  L  +        LT PLL    G  KM K+L   + +++   
Sbjct: 184 -VELGGTDQKFNLLVGRTLQSQYGQEPQCILTVPLLEGLDGVKKMSKSLGNYVGIDEP-- 240

Query: 253 SPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKIIATEITTM 309
            P + +    ++ D  +  + + ++   + +I  M    +         K+ +A EIT  
Sbjct: 241 -PSDMFGKIMSVSDDLMWRYYELVSARSLDDIADMKRRVQAGEAHPKAVKEDLAFEITAR 299

Query: 310 VHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEAR 369
            HG ++A +A       F         P  S  + E S     L     AG   S  EA+
Sbjct: 300 YHGDDKAAEARQGFNAVFAGGGVPDDAPEHSCPQGEDSTPPVFLE---AAGLVKSRGEAK 356

Query: 370 RHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLCG 418
           R +K  A+ ++     +    +        G+  +  GKK  +   + G
Sbjct: 357 RLIKEGALSVDGVRCDDAMAPLAP------GSYVVKLGKKRFLRLTVTG 399


>gi|89898384|ref|YP_515494.1| tyrosyl-tRNA synthetase [Chlamydophila felis Fe/C-56]
 gi|89331756|dbj|BAE81349.1| tyrosyl tRNA synthetase [Chlamydophila felis Fe/C-56]
          Length = 427

 Score =  399 bits (1026), Expect = e-109,   Method: Composition-based stats.
 Identities = 130/420 (30%), Positives = 214/420 (50%), Gaps = 21/420 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           DF+  L +RG +   S+   LD + S   V+AYIG+D TA SLH GH   +  L  +   
Sbjct: 18  DFIKYLKDRGILEDFSS--GLDNVIS--PVSAYIGFDPTAPSLHIGHWLGICFLRRMATF 73

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           G  P++L+G  T +IGDPS +   R ++   ++  N +K+    S ++       +  ++
Sbjct: 74  GVTPMALVGSATGMIGDPSGKSVERSLLERNQVAYNSQKLSECLSHYL------PEVQIV 127

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W      ID LR++G  F +  MLS ++++ R++ E+ +S+ EF+Y++LQ+YDF  
Sbjct: 128 NNLDWFKDTTVIDFLRDVGKHFRLGTMLSKDTIKQRIQSEEGISYTEFSYILLQSYDFAH 187

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + +   LQ GGSDQWGNI  GID   R    + + LT PLLT + G K+GKT +G IW
Sbjct: 188 LFEKHGVSLQCGGSDQWGNITSGIDYIRRRGLGQAYGLTYPLLTNSQGKKIGKTETGTIW 247

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           L+  +TSPY  +QY+  + D +    A+ LT L   EI  + +    +    K+ +A  I
Sbjct: 248 LDPNLTSPYELYQYFLRLPDQETPKIARMLTLLSNEEIFDLDQKFLLDPIAVKRFVAETI 307

Query: 307 TTMVHGREEAEKAATAAMEC------FDMSIHSQHMPT----ISISKDEVSRGMGLLTLI 356
              +HG    ++A             F      Q + +    +S+ + + + G   + L 
Sbjct: 308 VASIHGEGGLQEALAVTQSMHPGRVSFISEKDFQDLISMGQGVSLERSQ-TIGKRWVDLF 366

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V  G   S  EARR +K   + +N+  +++E+   +         + L+ GKK  ++  L
Sbjct: 367 VDVGVCGSKGEARRLVKQKGLYVNSDPVADEQSVFEEAQICFDQYVLLAQGKKKKLVLRL 426


>gi|301633473|gb|ADK87027.1| tyrosine--tRNA ligase [Mycoplasma pneumoniae FH]
          Length = 399

 Score =  399 bits (1025), Expect = e-109,   Method: Composition-based stats.
 Identities = 150/411 (36%), Positives = 229/411 (55%), Gaps = 19/411 (4%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
            D L++L ERG   Q +  +EL  L +QG    Y+G+D TA SLH G+   L +    Q 
Sbjct: 3   KDLLALLKERGLFVQANFEKELKQLLNQGSFAFYVGFDPTAPSLHIGNYVLLHVAQIFQA 62

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH P  L+G GT++IGDP+ R E R+MM  + I EN   IK     F+      ++ + 
Sbjct: 63  MGHIPHVLLGSGTALIGDPTGRMELRQMMSRETIAENTRNIKKQIRRFL-----GSNVVF 117

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
             NETWL  + YI+++RE+G  FSVN+ML+ ++  +R +R   L+ +E NYM+LQAYDF 
Sbjct: 118 CQNETWLKKLNYIEVIRELGPCFSVNKMLATDAFSARWER--GLTLMELNYMVLQAYDFY 175

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L + Y  +LQ+GGSDQW NI+ G DL  R    +++ +T+ LL  A+G KMGK+ SGA+
Sbjct: 176 YLNQKYGVQLQIGGSDQWANILAGADLIRRKTQKQVYGMTTNLLVKANGEKMGKSASGAL 235

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
           WL+ + TSPY+F+QYW N+DDA +      LT L    I+ +  L+G  I EAK  +A E
Sbjct: 236 WLDPQKTSPYDFYQYWINLDDASLQKVFLMLTKLDTKAIETLCNLKGAAIKEAKAKLAFE 295

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           +T  +HG + A  A   +   F     ++           V  G  L+ +IV  G   S 
Sbjct: 296 LTDAIHGTKAALAAQAKSARIFAFQPDTE--------TKTVRAGTRLVDVIVDLGLVVSR 347

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +EARR ++   + IN   +++ ++ ++      +  + +  GKK  +   +
Sbjct: 348 SEARRVIQQGGLTINQEKVTDVEMVLQAS----SQPLVIGKGKKRFVTVQV 394


>gi|258623090|ref|ZP_05718103.1| tyrosyl-tRNA synthetase [Vibrio mimicus VM573]
 gi|258584703|gb|EEW09439.1| tyrosyl-tRNA synthetase [Vibrio mimicus VM573]
          Length = 395

 Score =  399 bits (1025), Expect = e-109,   Method: Composition-based stats.
 Identities = 99/419 (23%), Positives = 174/419 (41%), Gaps = 28/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M + ++    I  +RG    I     +  L     +   +G D TA  +H GH   L  L
Sbjct: 1   MASIEAALAEI--KRGVEELIPEEELIAKLKENRPLRIKLGADPTAPDIHLGHTVILNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GH    L+G  T ++GDP+ ++ +R  +  +++  N +  K      +     K
Sbjct: 59  RTFQDLGHDVTFLIGDFTGMVGDPTGKNTTRPPLTREDVLRNADTYKQQVFKILDPAKTK 118

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N  WL  +    ++R + S  +V RML  +  + R    Q ++  EF Y +LQ
Sbjct: 119 ----IQFNSEWLSQLGAEGMIR-LASNQTVARMLERDDFKKRYNNGQPIAIHEFMYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGK 239
            YD V +    +  +++GG+DQ  N++ G +L +         L  PLL    G  KM K
Sbjct: 174 GYDSVAM----ETDVELGGTDQKFNLLMGRELQKANGQKPQVVLMMPLLVGLDGEKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA--KLQGKEINE 297
           +    I +++   +P   +    +I D  + S+ + L+  P+ EI +       G    +
Sbjct: 230 SAHNYIGVSE---APSEMFGKIMSISDDLMWSYYELLSFRPLEEIAQFKVDVANGTNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A EI    H   +A+ A    +  F      + MP       E   G+ +  L+ 
Sbjct: 287 IKILLAKEIIARFHTEADADAAEQEFINRFQKGAMPEEMPEF-----EFDSGIAISNLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            AG   ST++A R +K  A+K++   + + KL          G      GK+      +
Sbjct: 342 DAGLVASTSDALRMIKQGAVKLDGEKLEDAKLVPAC------GTAVYQVGKRKFARVTI 394


>gi|71278248|ref|YP_271371.1| tyrosyl-tRNA synthetase [Colwellia psychrerythraea 34H]
 gi|115305802|sp|Q47V01|SYY_COLP3 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|71143988|gb|AAZ24461.1| tyrosyl-tRNA synthetase [Colwellia psychrerythraea 34H]
          Length = 399

 Score =  399 bits (1025), Expect = e-109,   Method: Composition-based stats.
 Identities = 100/420 (23%), Positives = 181/420 (43%), Gaps = 24/420 (5%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  F   F + L  RG    +     L  L +   +    G+D TA  LH GH   +  L
Sbjct: 1   MTDFNQAF-AELK-RGAEEILVEEELLTKLKTGKPLKIKAGFDPTAPDLHLGHTVLINKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+ I L+G  T +IGDP+ ++ +R+ +  +++  N E  K      +      
Sbjct: 59  RQFQQLGHEVIFLIGDFTGMIGDPTGKNVTRKALTKEDVLANAETYKEQVFKILDPAKT- 117

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N TW+  +    +L ++ S  +V RM+  +  + R    Q+++  EF Y ++Q
Sbjct: 118 ---TVAFNSTWMDKLGAAGML-QLASRQTVARMMERDDFKKRYANGQAIAIHEFMYPLVQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGK 239
            +D V L    +  +++GG+DQ  N++ G +L +         L  PLL    G  KM K
Sbjct: 174 GWDSVAL----EADVELGGTDQKFNLLMGRELQKSEGQRPQTVLMMPLLEGLDGVQKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINE 297
           +L   I +     +P + +    +I D  +  + + L+  P+ EI+  +     GK   +
Sbjct: 230 SLGNYIGIT---DTPTDMFGKIMSISDVLMWRYYELLSFKPLEEIEGYKTEIENGKNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K  +A E+    H    A+ A    +  F        MP ++I+ +  +  + +  L+ 
Sbjct: 287 VKIDLAKELIARFHDEAAAQAAHDEFINRFQKGALPDDMPELTITTE--NGEIAIANLLK 344

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            AG   ST++A R +K  A KI++  +++  L I               GK+      + 
Sbjct: 345 DAGLVGSTSDAFRMIKQGAAKIDSEKVTDRSLVISA-----GTTAVYQVGKRKFARITVS 399


>gi|91794161|ref|YP_563812.1| tyrosyl-tRNA synthetase [Shewanella denitrificans OS217]
 gi|91716163|gb|ABE56089.1| tyrosyl-tRNA synthetase [Shewanella denitrificans OS217]
          Length = 398

 Score =  399 bits (1025), Expect = e-109,   Method: Composition-based stats.
 Identities = 100/416 (24%), Positives = 182/416 (43%), Gaps = 25/416 (6%)

Query: 6   SDFLSILSE--RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           +D   +L+E  RG    +     L  L     +   +G D TA  +H GH   L  +   
Sbjct: 2   ADLDQVLAEIKRGTDEILLEADLLAKLKEGRPLRIKLGADPTAPDIHLGHTVILNKMRTF 61

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q+ GH+ I L+G  T ++GDPS ++ +R  +  +++  N E  K      +     +   
Sbjct: 62  QELGHEVIFLIGDFTGMVGDPSGKNSTRPPLTREQVLANAETYKEQVYKILDPAKTR--- 118

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            +  N +WL  +    ++R + S  +V RM+  +  + R    QS++  EF Y +LQ YD
Sbjct: 119 -IEFNSSWLEPLGAAGMIR-LASQQTVARMMERDDFKKRYASGQSIAIHEFMYPLLQGYD 176

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLS 242
            V L  +    +++GG+DQ  N++ G +L +         +  PLL    G  KM K+  
Sbjct: 177 SVALKAD----VELGGTDQKFNLLMGRELQKAEGQKPQTVIMMPLLEGLDGVKKMSKSAH 232

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKK 300
             I +++        +    +I D  +  + + L+  P++EI++       G    + K 
Sbjct: 233 NYIGVSEPAN---EMFGKIMSISDDLMWRYYELLSFRPLAEIEQFKADVANGTNPRDVKI 289

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
            +A EI    H   +A+ A  A ++ F        +  I++   E   G+G+  L+  AG
Sbjct: 290 ALAKEIIARFHDEAQAQSAHQAFIDRFQKGAIPDDIEEITL---EAGEGLGVANLLKDAG 346

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             +ST+EA R +K  A+K++   + + +       F +        GK+      L
Sbjct: 347 LVSSTSEAMRMIKQGAVKMDGEKLEDSRQT-----FAAGLEAVFQVGKRKFAKVTL 397


>gi|189349410|ref|YP_001945038.1| tyrosyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
 gi|189333432|dbj|BAG42502.1| tyrosyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
          Length = 413

 Score =  399 bits (1025), Expect = e-109,   Method: Composition-based stats.
 Identities = 98/416 (23%), Positives = 186/416 (44%), Gaps = 31/416 (7%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           K     +L E  F  +++         +   +   +G D TA  +H GH   L  +  LQ
Sbjct: 25  KRGVDELLIEEEFAQKLA-----RSAATGKPLRIKLGLDPTAPDIHIGHTVVLNKMRQLQ 79

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GH  I L+G  TS+IGDPS R+ +R  +  ++I+ N +      +  +     +    
Sbjct: 80  DLGHTVIFLIGDFTSLIGDPSGRNATRPPLTREQIEANAKTYFEQAALVLDRDKTE---- 135

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           +  N  W   +    +++ + S ++V R+L  E    R +    +S  EF Y ++Q YD 
Sbjct: 136 IRYNSEWSMPLGADGMIK-LASRYTVARILEREDFTKRFQGGVPISIHEFLYPLMQGYDS 194

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSG 243
           V L  +    L++GG+DQ  N++ G +L ++    +   LT PLL    G  KM K+   
Sbjct: 195 VALNAD----LELGGTDQKFNLLVGRELQKQYGQEQQCILTMPLLEGLDGVEKMSKSKGN 250

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKI 301
            + ++++   P + +    +I D  +  + + L+   M EI   +     G+   + K +
Sbjct: 251 YVGISEK---PTDMFGKLMSISDTLMWRYFELLSFRSMDEIAGFKREAEGGRNPRDFKVM 307

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGF 361
           +A EI    H + +AE+A                +P++S++       + +  L+ +AG 
Sbjct: 308 LAQEIVARFHSQADAERALEDF-NHRAKGGVPDDIPSVSLA----GAPLAIGQLLKQAGL 362

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
             ST+EA R+++   +KI+ + +S++ L++        G   +  GK+      L 
Sbjct: 363 VPSTSEALRNIEQGGVKIDGTTVSDKGLKVDA------GEYVVQVGKRRFARVTLA 412


>gi|167564069|ref|ZP_02356985.1| tyrosyl-tRNA synthetase [Burkholderia oklahomensis EO147]
 gi|167571213|ref|ZP_02364087.1| tyrosyl-tRNA synthetase [Burkholderia oklahomensis C6786]
          Length = 413

 Score =  399 bits (1025), Expect = e-109,   Method: Composition-based stats.
 Identities = 101/416 (24%), Positives = 188/416 (45%), Gaps = 31/416 (7%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           K     +L E  F  +++         +   +   +G D TA  +H GH   L  +  LQ
Sbjct: 25  KRGVDELLIEEEFAQKLA-----KSAATGKPLRIKLGLDPTAPDIHIGHTVVLNKMRQLQ 79

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GH  I L+G  TS+IGDPS R+ +R  +  ++I+ N +      +  +     +    
Sbjct: 80  DLGHTVIFLIGDFTSLIGDPSGRNATRPPLTREQIESNAKTYFEQAALVLDREKTE---- 135

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           +  N  W   +    +++ + S ++V RML  E    R +    +S  EF Y ++Q YD 
Sbjct: 136 IRYNSEWSMPLGADGMIK-LASRYTVARMLEREDFTKRFQGGIPISIHEFLYPLMQGYDS 194

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSG 243
           V L  +    L++GG+DQ  N++ G +L ++    +   LT PLL    G  KM K+   
Sbjct: 195 VALNAD----LELGGTDQKFNLLVGRELQKQYGQEQQCILTMPLLEGLDGVEKMSKSKGN 250

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKI 301
            + ++++   P + +    +I D  +  + + L+   + EI   R     G+   + K +
Sbjct: 251 YVGISEK---PTDMFGKLMSISDVLMWRYFELLSFRSLDEIAQFRAEAEGGRNPRDFKVM 307

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGF 361
           +A EI    H R EAE+A                +PT++++       + +  L+ +AG 
Sbjct: 308 LAQEIVERFHSRAEAERALEDF-NHRAKGGVPDDIPTVTLT----GAPLAIGQLLKQAGL 362

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
             ST+EA R+++   +KI+ + +S++ L+++  +F       +  GK+      L 
Sbjct: 363 VPSTSEALRNIEQGGVKIDGATVSDKALKVEAGEF------VVQVGKRRFARVTLT 412


>gi|145590060|ref|YP_001156657.1| tyrosyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
 gi|145048466|gb|ABP35093.1| tyrosyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
          Length = 410

 Score =  399 bits (1025), Expect = e-109,   Method: Composition-based stats.
 Identities = 107/393 (27%), Positives = 176/393 (44%), Gaps = 26/393 (6%)

Query: 28  DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFR 87
               ++  +   +G D TA  +H GH   L  L  LQ  GH  I L+G  TS+IGDPS R
Sbjct: 41  RSQATKTPLRIKLGLDPTAPDIHLGHTVVLNKLRQLQDLGHTVIFLIGDFTSMIGDPSGR 100

Query: 88  DESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSF 147
           + +R  + ++EI  N E      S  +     +    +  N  W   +    +++     
Sbjct: 101 NATRPPLTAEEIAVNAETYYRQASMVLDPSKTE----VRYNSEWSDPLGARGMIQLAAKH 156

Query: 148 FSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNII 207
            +V RML  +    R +    +S  EF Y ++Q YD V L  +    L++GG+DQ  N++
Sbjct: 157 -TVARMLERDDFTKRYRSGVPISIHEFLYPLMQGYDSVALKSD----LELGGTDQKFNLL 211

Query: 208 CGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDD 266
            G +L           LT PLL    G  KM K+    I +++      + +    +I D
Sbjct: 212 VGRELQREHGQEPQCILTMPLLVGLDGVEKMSKSKGNYIGISEPAG---DMFGKLLSISD 268

Query: 267 ADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAM 324
             +  +   L+  PMSEID  +     G+   + K ++A EI    H +  AEKA     
Sbjct: 269 DLMWDYFTLLSFRPMSEIDLMKQEVAAGRNPKDCKVLLAQEIVARFHSQAAAEKALEDF- 327

Query: 325 ECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSII 384
                      +P +++S       MG+ +L+  AG A ST+EA R+++ N +KI+   I
Sbjct: 328 NHRAKGGVPDDIPEVNLS----GAPMGIASLLKAAGLAPSTSEAMRNIEQNGVKIDGVTI 383

Query: 385 SNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           ++++L+I+      TG   +  GK+      L 
Sbjct: 384 ADKQLKIE------TGAYVVQVGKRKFAKVTLS 410


>gi|167580608|ref|ZP_02373482.1| tyrosyl-tRNA synthetase [Burkholderia thailandensis TXDOH]
          Length = 413

 Score =  398 bits (1024), Expect = e-109,   Method: Composition-based stats.
 Identities = 99/416 (23%), Positives = 186/416 (44%), Gaps = 31/416 (7%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           K     +L E  F  +++         +   +   +G D TA  +H GH   L  +  LQ
Sbjct: 25  KRGVDELLIEEEFAQKLA-----RSAATGKPLRIKLGLDPTAPDIHLGHTVVLNKMRQLQ 79

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GH  I L+G  TS+IGDPS R+ +R  +  ++I+ N +      +  +     +    
Sbjct: 80  DLGHTVIFLIGDFTSLIGDPSGRNATRPPLTREQIESNAKTYFEQAALVLDREKTE---- 135

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           +  N  W   +    +++ + S ++V RML  E    R +    +S  EF Y ++Q YD 
Sbjct: 136 IRYNSEWSMPLGADGMIK-LASRYTVARMLEREDFTKRFQGGIPISIHEFLYPLMQGYDS 194

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSG 243
           V L  +    L++GG+DQ  N++ G +L ++    +   LT PLL    G  KM K+   
Sbjct: 195 VALNAD----LELGGTDQKFNLLVGRELQKQYGQEQQCILTMPLLEGLDGVEKMSKSKGN 250

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKI 301
            + + ++   P + +    +I D  +  + + L+   + EI   R     G+   + K +
Sbjct: 251 YVGIGEK---PNDMFGKLMSISDVLMWRYFELLSFRSLDEIARLRGEAEGGRNPRDFKVM 307

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGF 361
           +A EI    H + +AE+A                +PT++++       + +  L+ +AG 
Sbjct: 308 LAQEIVARFHSQADAERALEDF-NHRAKGGVPDDIPTVTLA----GAPLAIGQLLKQAGL 362

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
             ST+EA R+++   +KI+ + +S++ L++   +F       +  GK+      L 
Sbjct: 363 VPSTSEALRNIEQGGVKIDGATVSDKALKVDAGEF------VVQVGKRRFARVTLT 412


>gi|76810785|ref|YP_334783.1| tyrosyl-tRNA synthetase [Burkholderia pseudomallei 1710b]
 gi|76580238|gb|ABA49713.1| tyrosyl-tRNA synthetase [Burkholderia pseudomallei 1710b]
          Length = 435

 Score =  398 bits (1024), Expect = e-109,   Method: Composition-based stats.
 Identities = 98/416 (23%), Positives = 186/416 (44%), Gaps = 31/416 (7%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           K     +L E  F  +++         +   +   +G D TA  +H GH   L  +  LQ
Sbjct: 47  KRGVDELLIEEEFAQKLA-----KSAATDKPLRIKLGLDPTAPDIHLGHTVVLNKMRQLQ 101

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GH  I L+G  TS+IGDPS R+ +R  +  ++I+ N +      +  +     +    
Sbjct: 102 DLGHTVIFLIGDFTSLIGDPSGRNATRPPLTREQIESNAKTYFEQAALVLDRAKTE---- 157

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           +  N  W   +    +++ + S ++V RML  E    R +    +S  EF Y ++Q YD 
Sbjct: 158 IRYNSEWSMPLGADGMIK-LASRYTVARMLEREDFTKRFQGGIPISIHEFLYPLMQGYDS 216

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSG 243
           V L  +    L++GG+DQ  N++ G +L ++    +   LT PLL    G  KM K+   
Sbjct: 217 VALNAD----LELGGTDQKFNLLVGRELQKQYGQEQQCILTMPLLEGLDGVEKMSKSKGN 272

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKKI 301
            + ++++   P + +    +I D  +  + + L+   + EI R       G+   + K +
Sbjct: 273 YVGISEK---PTDMFGKLMSISDVLMWRYFELLSFRSLDEIARFRGEAEGGRNPRDFKVM 329

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGF 361
           +A EI    H + +AE+A                +P ++++       + +  L+ +AG 
Sbjct: 330 LAQEIVARFHSQADAERALEDF-NHRAKGGVPDDIPAVTLA----GAPLAIGQLLKQAGL 384

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
             ST+EA R+++   +KI+ + +S++ L++   +F       +  GK+      L 
Sbjct: 385 VPSTSEALRNIEQGGVKIDGATVSDKALKVDAGEF------VVQVGKRRFARVTLT 434


>gi|156975677|ref|YP_001446584.1| tyrosyl-tRNA synthetase [Vibrio harveyi ATCC BAA-1116]
 gi|156527271|gb|ABU72357.1| hypothetical protein VIBHAR_03412 [Vibrio harveyi ATCC BAA-1116]
          Length = 395

 Score =  398 bits (1024), Expect = e-109,   Method: Composition-based stats.
 Identities = 98/419 (23%), Positives = 177/419 (42%), Gaps = 28/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M + ++    I  +RG    I     +  L     +   +G D TA  +H GH      L
Sbjct: 1   MASIEAALAEI--KRGVEELIPEEELIAKLKEGRPLRIKLGADPTAPDIHLGHTVIFNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+   L+G  T+++GDP+ ++ +R  +  +++  N E  K      +     K
Sbjct: 59  RLFQELGHEVTFLIGDFTAMVGDPTGKNSTRPPLSREDVLRNAETYKEQVFKILDPAKTK 118

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N  WL  +    ++R + +  +V RML  +  + R    Q ++  EF Y +LQ
Sbjct: 119 ----IQFNSEWLSELGAEGMIR-LAANQTVARMLERDDFKKRYAGGQPIAIHEFMYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGK 239
            +D V +    +  +++GG+DQ  N++ G +L +         L  PLL    G  KM K
Sbjct: 174 GWDSVAM----ETDVELGGTDQKFNLLMGRELQKSHGQKPQVVLMMPLLVGLDGEKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINE 297
           +    I +++   +P   +    +I D  + S+ + L+  P+ EI +       GK   +
Sbjct: 230 SSGNYIGISE---APSEMFGKIMSISDVLMWSYYELLSFRPLEEIAQFKADVEAGKNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A EI    H   +A+ A    +  F  +     MP       +   G  +  L+ 
Sbjct: 287 IKVLLAKEIIARFHSEADADAAEQEFVNRFAKNQIPDEMPEF-----DFEAGTPVANLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +AG   ST+EA R +K  A KI    +++ K   ++      G      GK+      +
Sbjct: 342 EAGLCASTSEAMRMVKQGAAKIEGEKVADAKFAPEV------GTYVFQVGKRKFARITI 394


>gi|134280550|ref|ZP_01767261.1| tyrosyl-tRNA synthetase [Burkholderia pseudomallei 305]
 gi|237813770|ref|YP_002898221.1| tyrosine--tRNA ligase [Burkholderia pseudomallei MSHR346]
 gi|134248557|gb|EBA48640.1| tyrosyl-tRNA synthetase [Burkholderia pseudomallei 305]
 gi|237503099|gb|ACQ95417.1| tyrosine--tRNA ligase [Burkholderia pseudomallei MSHR346]
          Length = 435

 Score =  398 bits (1024), Expect = e-109,   Method: Composition-based stats.
 Identities = 98/416 (23%), Positives = 186/416 (44%), Gaps = 31/416 (7%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           K     +L E  F  +++         +   +   +G D TA  +H GH   L  +  LQ
Sbjct: 47  KRGVDELLIEEEFAQKLA-----KSAATGKPLRIKLGLDPTAPDIHLGHTVVLNKMRQLQ 101

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GH  I L+G  TS+IGDPS R+ +R  +  ++I+ N +      +  +     +    
Sbjct: 102 DLGHTVIFLIGDFTSLIGDPSGRNATRPPLTREQIESNAKTYFEQAALVLDRAKTE---- 157

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           +  N  W   +    +++ + S ++V RML  E    R +    +S  EF Y ++Q YD 
Sbjct: 158 IRYNSEWSMPLGADGMIK-LASRYTVARMLEREDFTKRFQGGIPISIHEFLYPLMQGYDS 216

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSG 243
           V L  +    L++GG+DQ  N++ G +L ++    +   LT PLL    G  KM K+   
Sbjct: 217 VALNAD----LELGGTDQKFNLLVGRELQKQYGQEQQCILTMPLLEGLDGVEKMSKSKGN 272

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKKI 301
            + ++++   P + +    +I D  +  + + L+   + EI R       G+   + K +
Sbjct: 273 YVGISEK---PTDMFGKLMSISDVLMWRYFELLSFRSLDEIARFRGEAEGGRNPRDFKVM 329

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGF 361
           +A EI    H + +AE+A                +P ++++       + +  L+ +AG 
Sbjct: 330 LAQEIVARFHSQADAERALEDF-NHRAKGGVPDDIPAVTLA----GAPLAIGQLLKQAGL 384

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
             ST+EA R+++   +KI+ + +S++ L++   +F       +  GK+      L 
Sbjct: 385 VPSTSEALRNIEQGGVKIDGATVSDKALKVDAGEF------VVQVGKRRFARVTLT 434


>gi|296046591|gb|ADG86437.1| tyrosine tRNA synthetase [Francisella novicida]
          Length = 399

 Score =  398 bits (1024), Expect = e-109,   Method: Composition-based stats.
 Identities = 100/419 (23%), Positives = 182/419 (43%), Gaps = 24/419 (5%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M +F   F + L  RG    +     L  L +   +    G+D TA  LH GH   +  L
Sbjct: 1   MSSFNQAF-AELK-RGAEEILVEEELLTKLKTGKPLKIKAGFDPTAPDLHLGHTVLINKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+ I L+G  T +IGDP+ ++ +R+ +  +++  N E  K      +      
Sbjct: 59  RQFQQLGHEVIFLIGDFTGMIGDPTGKNVTRKALTKEDVLANAETYKEQVFKILDPAKT- 117

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N TW+  +    +L ++ S  +V RM+  +  + R    Q+++  EF Y ++Q
Sbjct: 118 ---TVAFNSTWMDKLGAAGML-QLASRQTVARMMERDDFKKRYANGQAIAIHEFMYPLVQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGK 239
            +D V L    +  +++GG+DQ  N++ G +L +         L  PLL    G  KM K
Sbjct: 174 GWDSVAL----EADVELGGTDQKFNLLMGRELQKSEGQRPQTVLMMPLLEGLDGVQKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINE 297
           +L   I +     +P + +    +I D  +  + + L+  P+ EI+  +     GK   +
Sbjct: 230 SLGNYIGIT---DTPTDMFGKIMSISDVLMWRYYELLSFKPLEEIEGYKTEIENGKNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K  +A E+    H    A+ A    +  F        MP ++I+ +  +  + +  L+ 
Sbjct: 287 VKIDLAKELIARFHDEAAAQAAHDEFINRFQKGALPDDMPELTITTE--NGEIAIANLLK 344

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            AG   ST++A R +K  A KI++  +++  L I               GK+      +
Sbjct: 345 DAGLVGSTSDAFRMIKQGAAKIDSEKVTDRSLVISA-----GTTAVYQVGKRKFARITI 398


>gi|161723158|ref|YP_441787.2| tyrosyl-tRNA synthetase [Burkholderia thailandensis E264]
 gi|167618714|ref|ZP_02387345.1| tyrosyl-tRNA synthetase [Burkholderia thailandensis Bt4]
 gi|257137954|ref|ZP_05586216.1| tyrosyl-tRNA synthetase [Burkholderia thailandensis E264]
 gi|115305799|sp|Q2SZ62|SYY_BURTA RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
          Length = 413

 Score =  398 bits (1023), Expect = e-109,   Method: Composition-based stats.
 Identities = 99/416 (23%), Positives = 186/416 (44%), Gaps = 31/416 (7%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           K     +L E  F  +++         +   +   +G D TA  +H GH   L  +  LQ
Sbjct: 25  KRGVDELLIEEEFAQKLA-----RSAATGKPLRIKLGLDPTAPDIHLGHTVVLNKMRQLQ 79

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GH  I L+G  TS+IGDPS R+ +R  +  ++I+ N +      +  +     +    
Sbjct: 80  DLGHTVIFLIGDFTSLIGDPSGRNATRPPLTREQIESNAKTYFEQAALVLDREKTE---- 135

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           +  N  W   +    +++ + S ++V RML  E    R +    +S  EF Y ++Q YD 
Sbjct: 136 IRYNSEWSMPLGADGMIK-LASRYTVARMLEREDFTKRFQGGIPISIHEFLYPLMQGYDS 194

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSG 243
           V L  +    L++GG+DQ  N++ G +L ++    +   LT PLL    G  KM K+   
Sbjct: 195 VALNAD----LELGGTDQKFNLLVGRELQKQYGQEQQCILTMPLLEGLDGVEKMSKSKGN 250

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKI 301
            + + ++   P + +    +I D  +  + + L+   + EI   R     G+   + K +
Sbjct: 251 YVGIGEK---PNDMFGKLMSISDVLMWRYFELLSFRSLDEIARLRGEAEGGRNPRDFKVM 307

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGF 361
           +A EI    H + +AE+A                +PT++++       + +  L+ +AG 
Sbjct: 308 LAQEIVARFHSQADAERALEDF-NHRAKGGVPDDIPTVTLA----GAPLAIGQLLKQAGL 362

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
             ST+EA R+++   +KI+ + +S++ L++   +F       +  GK+      L 
Sbjct: 363 VPSTSEALRNIEQGGVKIDGATVSDKALKVDAGEF------VVQVGKRRFARVTLT 412


>gi|114331532|ref|YP_747754.1| tyrosyl-tRNA synthetase [Nitrosomonas eutropha C91]
 gi|114308546|gb|ABI59789.1| tyrosyl-tRNA synthetase [Nitrosomonas eutropha C91]
          Length = 406

 Score =  398 bits (1023), Expect = e-109,   Method: Composition-based stats.
 Identities = 100/414 (24%), Positives = 171/414 (41%), Gaps = 24/414 (5%)

Query: 8   FLSILS--ERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
            +  L   +RG    +        L     +    G+D TA  LH GH   L  L  LQ+
Sbjct: 5   IIHQLQVIKRGCQELLIEEELTQKLTKNQPLRIKAGFDPTAPDLHLGHTVLLNKLRQLQE 64

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH  + L+G  T +IGDPS ++ +R  +  ++I +N E         +K         +
Sbjct: 65  LGHHILFLIGDFTGMIGDPSGKNATRPPLTCEQIAQNAETYTSQVFKILK----PEQTEV 120

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           + N TW+      DL+R + S ++V RML  +    R    + ++  EF Y ++Q YD V
Sbjct: 121 VFNSTWMDKFSAADLVR-LASTYTVARMLERDDFSKRYHENRPIAIHEFLYPLVQGYDSV 179

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGA 244
            L  +    L++GG+DQ  N++ G +L +         LT PLL    G  KM K+L+  
Sbjct: 180 ALKTD----LELGGTDQKFNLLVGRELQKHYGQSPQCILTMPLLEGLDGIQKMSKSLNNY 235

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKKII 302
           + +N+   SP   +    +I D  +  + + L+   +  I +       G+   + K   
Sbjct: 236 VGINE---SPTEMFGKLMSISDTLMWRYIELLSFESLDTIHQWQLEVEAGRNPRDIKVQF 292

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFA 362
           A EI    H R  A +A       F        +P   +        +    L+   G  
Sbjct: 293 AQEIVARFHSRTAAIQATEDFDARFRKGAIPDDIPEKKLYVQ--GTELAAPQLLKLTGLT 350

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            ST+EA R ++   +K+N + +S++   + +        +    GK+      L
Sbjct: 351 ASTSEALRMIEQGGVKLNGNKVSDKTQTVPV-----NTTVIAQVGKRKFAKIIL 399


>gi|330795995|ref|XP_003286055.1| hypothetical protein DICPUDRAFT_30367 [Dictyostelium purpureum]
 gi|325083963|gb|EGC37402.1| hypothetical protein DICPUDRAFT_30367 [Dictyostelium purpureum]
          Length = 465

 Score =  398 bits (1023), Expect = e-109,   Method: Composition-based stats.
 Identities = 140/437 (32%), Positives = 225/437 (51%), Gaps = 34/437 (7%)

Query: 7   DFLSILSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           + + IL  RGFIHQ++   + +  +  +  +T Y G+D TA SLH G+L  LM++  L+K
Sbjct: 35  NVIDILKARGFIHQMTETDDVMRSITEKKKITFYTGFDPTADSLHIGNLLTLMVMSHLKK 94

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH PI+++GG T++IGDPS +   R ++    I+ N+  ++    + +       D  +
Sbjct: 95  HGHNPIAIVGGATALIGDPSGKSTDRPVLSEDFIENNLVYLRENIRTIL-----GEDTTI 149

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ---SLSFLEFNYMILQAY 182
           LNN  W  ++  I+ LR+IG++F V  M+  + +++RL  E     +S+ EF Y +LQA 
Sbjct: 150 LNNIDWNKNLSIINFLRDIGTYFRVGTMIKKDFIQNRLNSENDDSGISYTEFTYSLLQAN 209

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DF  L  N  C LQ+GGSDQWGNI+ GIDL  +    +   LT PLLT + G K+GK+  
Sbjct: 210 DFAHLYHNNKCELQIGGSDQWGNIVSGIDLIRKRYKGQGMGLTIPLLTNSEGQKLGKSEG 269

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKK 300
            +IWL+   TS Y F+QYW  I DADV    K  T LP++EI  +     +      A+K
Sbjct: 270 NSIWLSPHKTSSYMFYQYWIQIADADVEKLLKLFTYLPLNEISEIVSQHNQNPHLRTAQK 329

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
            ++ E+T +VHG++  E+A       F    +S  +  +  + + +  G  +  L+ KA 
Sbjct: 330 KLSEEVTRLVHGQKGLEEALLTTEILFGK--YSDALSNLDENNNCIIEGKSVGDLLSKAN 387

Query: 361 ---FATST------------------NEARRHLKSNAIKINNSIISNEKLQIKLQDFDST 399
               + S                    +AR+      + +N+ +I++ K+ +      S 
Sbjct: 388 YISLSKSKYLNQKIVNILSEVSGISSTQARKLFTDKVVFMNSKLINDPKITLAENQLISN 447

Query: 400 GNIKLSFGKKNHIICHL 416
             I L  GKKN  +   
Sbjct: 448 HFILLKSGKKNFHLIKF 464


>gi|329942783|ref|ZP_08291562.1| tyrosyl-tRNA synthetase [Chlamydophila psittaci Cal10]
 gi|332287375|ref|YP_004422276.1| tyrosyl-tRNA synthetase [Chlamydophila psittaci 6BC]
 gi|313847956|emb|CBY16952.1| tyrosyl-tRNA synthetase [Chlamydophila psittaci RD1]
 gi|325506984|gb|ADZ18622.1| tyrosyl-tRNA synthetase [Chlamydophila psittaci 6BC]
 gi|328815043|gb|EGF85032.1| tyrosyl-tRNA synthetase [Chlamydophila psittaci Cal10]
          Length = 412

 Score =  398 bits (1023), Expect = e-109,   Method: Composition-based stats.
 Identities = 135/422 (31%), Positives = 216/422 (51%), Gaps = 25/422 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           DF+  L +RG +   S+   LD + +   V+AY+G+D TA SLH GH   +  L  +   
Sbjct: 3   DFIQHLQDRGILENFSS--GLDSVST--PVSAYLGFDPTAPSLHIGHWIGICFLRRMASF 58

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           G  P++L+G  T +IGDPS +   R ++   ++  N +K+    S ++          ++
Sbjct: 59  GITPVALVGSATGMIGDPSGKSIERTLLEESQVAYNSQKLSECLSRYL------PGLQIV 112

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL     ID LR++G  F +  ML  ++V+ R++ E+ +S+ EF+YM+LQ+YDF  
Sbjct: 113 NNMDWLKETTVIDFLRDVGKHFRLGAMLGKDTVKQRVQSEEGISYTEFSYMLLQSYDFAY 172

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + +   LQ GGSDQWGNI  GID   RL   + + LT PLLT + G K+GKT SG IW
Sbjct: 173 LFEKHGVCLQCGGSDQWGNITSGIDYIRRLGLGQAYGLTYPLLTNSQGKKIGKTESGTIW 232

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           L+ ++TS Y  +QY+  + D +V   A+ LT L   EI  + +    +    KK +A  I
Sbjct: 233 LDPKLTSAYELYQYFLRLPDQEVPKVARTLTLLSNEEIFDLDQKFLLDPVAVKKFVAETI 292

Query: 307 TTMVHGREEAEKAA------------TAAMECFDMSIHSQHMPTISISKDEVSRGMGLLT 354
            T +HG +   +A             + + + F   I       +S+ + + + G   + 
Sbjct: 293 VTSIHGEDGLREAQIVTQSMHPGKVSSVSEKDFQDLIAMGQ--GVSLERAQ-ALGKRWID 349

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           L V  G  +S  EARR ++   + +N+  I NE    +         + L+ GKK  ++ 
Sbjct: 350 LFVTLGVCSSKGEARRLIEQKGLYVNSEPIENEHSVCEETQVCFDQYVLLAQGKKKKLVL 409

Query: 415 HL 416
            L
Sbjct: 410 RL 411


>gi|262393369|ref|YP_003285223.1| tyrosyl-tRNA synthetase [Vibrio sp. Ex25]
 gi|262336963|gb|ACY50758.1| tyrosyl-tRNA synthetase [Vibrio sp. Ex25]
          Length = 395

 Score =  398 bits (1023), Expect = e-109,   Method: Composition-based stats.
 Identities = 96/419 (22%), Positives = 179/419 (42%), Gaps = 28/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M + ++    I  +RG    I     +  L     +   +G D TA  +H GH      L
Sbjct: 1   MASIEAALAEI--KRGVEELIPEEELIAKLKEDRPLRIKLGADPTAPDIHLGHTVIFNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+   L+G  T+++GDP+ ++ +R  +  +++  N E  K      +     K
Sbjct: 59  RLFQELGHEVTFLIGDFTAMVGDPTGKNTTRPPLSREDVLRNAETYKEQVFKILDPAKTK 118

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N  WL  +    ++R + +  +V RML  +  + R    Q ++  EF Y +LQ
Sbjct: 119 ----IQFNSEWLSELGAEGMIR-LAANQTVARMLERDDFKKRYAGGQPIAIHEFMYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGK 239
            +D V +    +  +++GG+DQ  N++ G +L +         L  PLL    G  KM K
Sbjct: 174 GWDSVAM----ETDVELGGTDQKFNLLMGRELQKSHGQKPQVVLMMPLLVGLDGEKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINE 297
           + +  I +++   +P   +    +I D  + S+ + L+  P+ EI +       GK   +
Sbjct: 230 SANNYIGISE---APSEMFGKIMSISDDLMWSYYELLSFRPLEEIAQFKADVEAGKNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A EI    H   +A+ A    +  F  +     MP       +   G  +  L+ 
Sbjct: 287 IKVLLAKEIIARFHSEADADAAEQEFVNRFAKNQIPDEMPEF-----DFDAGRPVSNLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +AG   S+++A R +K  A+K++   I++ K   +       G      GK+      +
Sbjct: 342 EAGLCPSSSDAMRMVKQGAVKMDGEKIADSKFAPEA------GTYVFQVGKRKFARITI 394


>gi|46579366|ref|YP_010174.1| tyrosyl-tRNA synthetase [Desulfovibrio vulgaris str. Hildenborough]
 gi|120603076|ref|YP_967476.1| tyrosyl-tRNA synthetase [Desulfovibrio vulgaris DP4]
 gi|81404913|sp|Q72DH6|SYY_DESVH RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|46448780|gb|AAS95433.1| tyrosyl-tRNA synthetase [Desulfovibrio vulgaris str. Hildenborough]
 gi|120563305|gb|ABM29049.1| tyrosyl-tRNA synthetase [Desulfovibrio vulgaris DP4]
 gi|311233191|gb|ADP86045.1| tyrosyl-tRNA synthetase [Desulfovibrio vulgaris RCH1]
          Length = 398

 Score =  398 bits (1023), Expect = e-109,   Method: Composition-based stats.
 Identities = 99/417 (23%), Positives = 176/417 (42%), Gaps = 29/417 (6%)

Query: 7   DFLSILS--ERGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           D    L   +RG   ++ +  EL     +G  +    G+D TA  LH GH   +  L   
Sbjct: 3   DIDRQLEHIKRGC-AELIDEGELRKKLERGTPLRIKAGFDPTAPDLHLGHTVLIHKLRHF 61

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q+ GH  I L+G  T +IGDPS R ++R  +  +++  N E  K      +         
Sbjct: 62  QELGHTVIFLIGDFTGLIGDPSGRSDTRPPLTREQVLANAETYKQQVFKILD----PEKT 117

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           ++  N  W+      D +R + S ++V RM+  +    R K  + ++  EF Y ++Q YD
Sbjct: 118 VVDFNSRWMGEFGAADFIR-LASRYTVARMMERDDFEKRYKEGRPIAVHEFLYPLVQGYD 176

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLS 242
            V L  +    +++GG+DQ  N++ G  L  +        LT PLL    G  KM K+L 
Sbjct: 177 SVALKAD----VELGGTDQKFNLLVGRHLQSQYGQEPQCILTMPLLEGLDGVKKMSKSLG 232

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID---RMAKLQGKEINEAK 299
             + +++   SP + +    ++ D  +  + + +++  + EI    R  +         K
Sbjct: 233 NYVGIDE---SPADMFGKLMSVSDELMWRYFELISSRSLDEIADLRRKVETGEAHPKLVK 289

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKA 359
           + +A E+TT  HG ++A +A       F         P  +    + S     L     A
Sbjct: 290 ESLAYELTTRYHGEDKAAEAQQGFNAVFAGGGVPDDAPVHACDHGDDSTPPAFLE---AA 346

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           G   S  EA+R +K  A+ ++     +    +      ++G   +  GKK  +   +
Sbjct: 347 GLVKSRGEAKRLIKEGALSVDGVRCDDANSPL------ASGEYVIKLGKKRFLRLTV 397


>gi|118581710|ref|YP_902960.1| tyrosyl-tRNA synthetase [Pelobacter propionicus DSM 2379]
 gi|118504420|gb|ABL00903.1| tyrosyl-tRNA synthetase [Pelobacter propionicus DSM 2379]
          Length = 404

 Score =  398 bits (1023), Expect = e-109,   Method: Composition-based stats.
 Identities = 107/422 (25%), Positives = 184/422 (43%), Gaps = 30/422 (7%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLML 59
           M   K   + IL E+          +L+     G  +    G+D TA  LH GH   +  
Sbjct: 7   MAVIKRGAVEILIEKEL------EAKLEKSLKTGVPLRIKAGFDPTAPDLHLGHTVLIHK 60

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG 119
           L   Q+ GH+   L+G  T +IGDP+ + E+R+++  +++ +N E  K      +     
Sbjct: 61  LRQFQQLGHEVNFLIGDFTGMIGDPTGKSETRKVLTREDVLKNAETYKEQVFKILDPDKT 120

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
           K    ++ N +WL  +    L+  + S ++V RML  +    R   +Q +S  EF Y ++
Sbjct: 121 K----VVFNSSWLNDLGCGGLIA-LASKYTVARMLERDDFHKRFSSQQPISIHEFLYPLV 175

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMG 238
           Q YD V L  +    +++GG+DQ  N++ G +L           LT PLL    G  KM 
Sbjct: 176 QGYDSVALKSD----VELGGTDQKFNLLVGRELQREWGQEPQCVLTMPLLEGLDGVNKMS 231

Query: 239 KTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EI 295
           K+L   I +N+        +    +I D  +V + + L+ +P+ E++++ +         
Sbjct: 232 KSLGNYIGINEPGD---EIFGKVMSISDELMVRYYELLSDMPLPELEKLKQGLADNSLHP 288

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTL 355
            E KK +  E+    HG   A  A    ++ F  +     MP   IS       + L   
Sbjct: 289 METKKALGRELVGRFHGAAAARDAEENFVKRFRDNQIPDDMPQ--ISHCLADGTLLLARA 346

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           + +AG   S  EARR +    +K+N   ISN  L++     D+ G   +  G++      
Sbjct: 347 MSEAGLTKSNGEARRSIDQGGVKLNGEKISNPNLEL-----DAAGEYIVQIGRRRFGRII 401

Query: 416 LC 417
           + 
Sbjct: 402 VS 403


>gi|261491655|ref|ZP_05988237.1| tyrosyl-tRNA synthetase [Mannheimia haemolytica serotype A2 str.
           BOVINE]
 gi|261494226|ref|ZP_05990726.1| tyrosyl-tRNA synthetase [Mannheimia haemolytica serotype A2 str.
           OVINE]
 gi|261310129|gb|EEY11332.1| tyrosyl-tRNA synthetase [Mannheimia haemolytica serotype A2 str.
           OVINE]
 gi|261312670|gb|EEY13791.1| tyrosyl-tRNA synthetase [Mannheimia haemolytica serotype A2 str.
           BOVINE]
          Length = 396

 Score =  398 bits (1023), Expect = e-108,   Method: Composition-based stats.
 Identities = 104/419 (24%), Positives = 178/419 (42%), Gaps = 27/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M       L+ L  RG  +  S    +  L     +   +G D TA  +H GH   L  L
Sbjct: 1   MTQAIESVLAELK-RGVENIYSEEDLITKLKENRPLRIKLGADPTAPDIHLGHTVVLNKL 59

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+   L+G  T ++GDPS ++ +R  +  +++  N E  K      +     K
Sbjct: 60  RQFQQFGHEVYFLIGDFTGMVGDPSGKNSTRPPLSREDVLRNAETYKEQIFKILDPQKTK 119

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               ++ N  WL  +    ++R + S ++V RML  E  ++R   +Q ++  EF Y +LQ
Sbjct: 120 ----IVFNSEWLGKLGTEGMIR-LASNYTVARMLEREDFKNRFTNQQPIAIHEFIYPLLQ 174

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGK 239
            +D VEL  +    +++GG+DQ  N++ G +L +        A+T PLL    G  KM K
Sbjct: 175 GHDSVELKAD----VELGGTDQTFNLLVGRELQKSAGQKPQVAMTLPLLVGLDGEKKMSK 230

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINE 297
           +L   I + +   +P   +    +I D  +  +   L+  P+ EI ++      GK   +
Sbjct: 231 SLGNYIGVTE---APSEMFGKIMSISDDLMWDWYNLLSFRPLDEIAQLKADVENGKNPRD 287

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A EI    H    A+ A    +  F        +P  +         +GL  L+ 
Sbjct: 288 VKILLAKEIIARFHDEAAADAAEQEFVNRFQKGAIPDEVPEFT-----FEGEIGLAALLK 342

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +AG   ST+EA R  +   +KI+   + + K           G      GK+      +
Sbjct: 343 EAGLVPSTSEAIRSAQQGGVKIDGEKVEDVKQT------AQKGTFVYQVGKRKFARITV 395


>gi|170093041|ref|XP_001877742.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164647601|gb|EDR11845.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 474

 Score =  398 bits (1023), Expect = e-108,   Method: Composition-based stats.
 Identities = 140/435 (32%), Positives = 218/435 (50%), Gaps = 34/435 (7%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + L  L  RGFIH ++    L +   Q     Y G D TASSLH GHL  LM L      
Sbjct: 30  ELLDDLVRRGFIHDVTRRDHLRVSL-QTTQGVYAGIDPTASSLHVGHLIPLMCLLHFHLR 88

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK----YGTGKTD 122
           GH+ I L+GG T  +GDPS R   R++   ++++ N++ ++    SF      Y   +  
Sbjct: 89  GHRVIPLIGGATGRVGDPSGRSVERQLADVEQVENNVQCLQKSVRSFFSRAVAYAETRHG 148

Query: 123 AL--------MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEF 174
           A+        + +N  W   +  +D L+ +G    VN ML+ ESVR+RL  +Q LSF EF
Sbjct: 149 AVQEERFLPVVESNLKWHSQLTMLDFLQSVGIHARVNTMLNRESVRARLSSQQGLSFTEF 208

Query: 175 NYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK---------LFALT 225
            Y +LQAYDF  L K+++C +Q+GGSDQWGNI+ G++L  RL              + +T
Sbjct: 209 TYQLLQAYDFYHLYKHHNCSIQVGGSDQWGNILAGLELIGRLDDGPSAPATSHTGAYGIT 268

Query: 226 SPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID 285
           +PLLTT+SG K GK+   AIWLN + TS ++F+QY+  + DADV  +    T +   +I 
Sbjct: 269 TPLLTTSSGEKFGKSAGNAIWLNPDQTSVFDFYQYFLKVSDADVERYLNLFTLMTSQDIQ 328

Query: 286 RMAKLQ--GKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMS----------IHS 333
            +  +     E   A++ +A E+T MVH  E    A T     F+            +  
Sbjct: 329 NVMGVHVDHPEKRVAQRRLAAEVTEMVHTPEGLVNAETLTGLFFESDYAGLKVKDILLAL 388

Query: 334 QHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL 393
           +  P + +  +E  R   +  L  + G A+S + AR  + S  + +N+ ++ + +  I +
Sbjct: 389 KDDPRLVLVSEEEMRATPIYKLASRHGLASSNSAARALVASRGLYVNDIVVCDIQTHIPI 448

Query: 394 QDFDSTGNIKLSFGK 408
           +         +  GK
Sbjct: 449 EHLIDGRVAIMRAGK 463


>gi|33603324|ref|NP_890884.1| tyrosyl-tRNA synthetase [Bordetella bronchiseptica RB50]
 gi|81430199|sp|Q7WFD0|SYY_BORBR RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|33577448|emb|CAE34713.1| tyrosyl-tRNA synthetase [Bordetella bronchiseptica RB50]
          Length = 409

 Score =  398 bits (1022), Expect = e-108,   Method: Composition-based stats.
 Identities = 98/387 (25%), Positives = 175/387 (45%), Gaps = 25/387 (6%)

Query: 35  VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMM 94
            +   +G D TA  +H GH   L  +  LQ  GH  I L+G  TS IGDPS R+ +R  +
Sbjct: 45  PLRIKLGLDPTAPDIHLGHTVVLNKMRQLQDLGHNVIFLIGDFTSTIGDPSGRNSTRPPL 104

Query: 95  RSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRML 154
             ++I+ N +      S  +     +    +  N  W   +    ++ ++ S ++V RM+
Sbjct: 105 TREQIETNAKTYYAQASLVLDPARTE----IRYNSEWCDPLGARGMI-QLASRYTVARMM 159

Query: 155 SFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
             E    R K    ++  EF Y +LQ YD V L  +    L++GG+DQ  N++ G +L +
Sbjct: 160 EREDFTRRFKGGVPIAVHEFLYPLLQGYDSVALKAD----LELGGTDQKFNLLVGRELQK 215

Query: 215 RLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFA 273
                +   LT PLL    G  KM K+    I +++   +P + +    +I D  +  + 
Sbjct: 216 EYGQEQQCILTMPLLVGTDGVEKMSKSKGNYIGISE---APESMFGKLMSISDTLMWRYY 272

Query: 274 KRLTTLPMSEIDRMAKL--QGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSI 331
           + L+   +++I  +      G+   +AK  +A EI    H  + AE A  A    F    
Sbjct: 273 ELLSFRSLADIAALKAEIDGGRNPRDAKVALAQEIVARFHSPQAAEAALAAFEARFRDGA 332

Query: 332 HSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
             + MP +++         G+L ++ +AG   S +EA+R+++   +++N   + ++ LQ+
Sbjct: 333 IPEDMPEVTVG----GAPQGILRILREAGLVASGSEAQRNVEQGGVRVNGDRVEDKSLQL 388

Query: 392 KLQDFDSTGNIKLSFGKKNHIICHLCG 418
                   G   +  GK+      L G
Sbjct: 389 SA------GTYVVQVGKRKFARVKLVG 409


>gi|332286792|ref|YP_004418703.1| tyrosyl-tRNA synthetase [Pusillimonas sp. T7-7]
 gi|330430745|gb|AEC22079.1| tyrosyl-tRNA synthetase [Pusillimonas sp. T7-7]
          Length = 409

 Score =  398 bits (1022), Expect = e-108,   Method: Composition-based stats.
 Identities = 97/387 (25%), Positives = 173/387 (44%), Gaps = 25/387 (6%)

Query: 35  VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMM 94
            +   +G D TA  +H GH   L  +  LQ  GH  I L+G  TS+IGDPS R+ +R  +
Sbjct: 45  PLRIKLGLDPTAPDIHLGHTVVLNKMRQLQDLGHTVIFLIGDFTSMIGDPSGRNATRPPL 104

Query: 95  RSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRML 154
            +++IQEN +      S  +     +    +  N  W   +    ++ ++ S ++V RM+
Sbjct: 105 TAEQIQENAKTYYAQASLVLDPSRTE----IRYNSEWCDPLGARGMI-QLASRYTVARMM 159

Query: 155 SFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
             E    R K    +S  EF Y ++Q YD V L  +    L++GG+DQ  N++ G +L +
Sbjct: 160 EREDFTRRFKGGIPISVHEFLYPLMQGYDSVALKSD----LELGGTDQKFNLLVGRELQK 215

Query: 215 RLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFA 273
                    LT PLL    G  KM K+    I + +   +P + +    +I D  +  + 
Sbjct: 216 EYGQEPQCILTMPLLEGTDGVDKMSKSKGNYIGITE---APESMFGKLMSISDTLMWKYY 272

Query: 274 KRLTTLPMSEIDRMAKL--QGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSI 331
           + L+   M +I ++      G    + K ++  EI    H ++ A  A  +    F    
Sbjct: 273 ELLSFRSMDDIAQLQNQVKSGMNPRDVKVMLGQEIVARFHTQQAAHDALASFEARFRDGA 332

Query: 332 HSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
             + MP + +        +G+L ++ +AG   S  EA+R+++   ++++   I ++ LQ+
Sbjct: 333 IPEDMPEVQLGAA----PLGILKVLREAGLVASGAEAQRNVEQGGVRVDGDRIEDKSLQL 388

Query: 392 KLQDFDSTGNIKLSFGKKNHIICHLCG 418
                   G   +  GK+      L G
Sbjct: 389 PA------GTYVVQVGKRKFARVTLTG 409


>gi|186477308|ref|YP_001858778.1| tyrosyl-tRNA synthetase [Burkholderia phymatum STM815]
 gi|184193767|gb|ACC71732.1| tyrosyl-tRNA synthetase [Burkholderia phymatum STM815]
          Length = 432

 Score =  398 bits (1022), Expect = e-108,   Method: Composition-based stats.
 Identities = 100/420 (23%), Positives = 192/420 (45%), Gaps = 31/420 (7%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           +   K     +L E  F  +++         +   +   +G D TA  +H GH   L  +
Sbjct: 40  LEVTKRGVDELLIEEEFAQKLA-----RSAATGTPLRIKLGLDPTAPDIHIGHTVVLNKM 94

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             LQ  GH  I L+G  TS+IGDPS R+ +R  +  ++I+ N +      +  +     +
Sbjct: 95  RQLQDLGHTVIFLIGDFTSLIGDPSGRNATRPPLTREQIESNAKTYFEQAALVLDRAKTE 154

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N  W   +    +++ + S ++V R+L  E    R +    +S  EF Y ++Q
Sbjct: 155 ----IRYNSEWSMPLGADGMIK-LASRYTVARILEREDFTKRFQSGVPISIHEFLYPLMQ 209

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGK 239
            YD V L  +    L++GG+DQ  N++ G +L ++    +   LT PLL    G  KM K
Sbjct: 210 GYDSVALNAD----LELGGTDQKFNLLVGRELQKQYGQEQQCILTMPLLEGLDGVEKMSK 265

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINE 297
           +    + ++++   P + +    +I D  +  + + L+  PMSEI+   +    G+   +
Sbjct: 266 SKGNYVGISEK---PNDMFGKLMSISDVLMWRYFELLSFRPMSEIEGFKREIDGGRNPRD 322

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A EI    H + +AE+A                +PT++++       + +  L+ 
Sbjct: 323 FKVLLAQEIVARFHSQADAERALEDF-NHRAKGGVPDDIPTVTLA----GAPLAIGQLLK 377

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           +AG   ST+EA R+++   +KI+ + +S++ L+++  +F       +  GK+      L 
Sbjct: 378 QAGLVPSTSEALRNIEQGGVKIDGATVSDKGLKVEAGEF------VVQVGKRRFARVTLT 431


>gi|312797270|ref|YP_004030192.1| Tyrosyl-tRNA synthetase [Burkholderia rhizoxinica HKI 454]
 gi|312169045|emb|CBW76048.1| Tyrosyl-tRNA synthetase (EC 6.1.1.1) [Burkholderia rhizoxinica HKI
           454]
          Length = 420

 Score =  398 bits (1022), Expect = e-108,   Method: Composition-based stats.
 Identities = 97/409 (23%), Positives = 183/409 (44%), Gaps = 30/409 (7%)

Query: 15  RG----FIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           RG     I      +      +   +   +G D TA  +H GH   L  +  LQ  GH  
Sbjct: 33  RGCDELLIEDEFAQKLARSAQTGKPLRIKLGLDPTAPDIHIGHTVVLNKMRQLQDLGHTV 92

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           I L+G  TS+IGDPS R+++R  +  ++I+ N +      +  +     +    +  N  
Sbjct: 93  IFLIGDFTSLIGDPSGRNQTRPPLTREQIEANAKTYFEQAALVLDREKTE----IRYNSE 148

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           W   +    +++ + S ++V RML  +    R +    +S  EF Y ++Q YD V L  +
Sbjct: 149 WSMPLGADGMIK-LASRYTVARMLERDDFTKRFQGGVPISIHEFLYPLMQGYDSVALQSD 207

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNK 249
               L++GG+DQ  N++ G +L ++        LT PLL    G  KM K+ +  + +++
Sbjct: 208 ----LELGGTDQKFNLLVGRELQKQYGQEPQCILTMPLLEGLDGVDKMSKSKNNYVGISE 263

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATEIT 307
           +   P + +    +I D  +  + + L+   + EI    +    G+   E K ++A EI 
Sbjct: 264 K---PSDMFGKLMSISDTLMWRYFELLSFRSLEEIADFKRQVQAGRNPRELKVLLAQEIV 320

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
              H + +A++A                +P I++S       + +  L+ +AG   ST+E
Sbjct: 321 ARFHSQADAQRALEDF-NHRARGGVPDDIPEIALS----GAPLPIGQLLKQAGLVPSTSE 375

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           A R+++ + +KI+ + I+++ L++        G   +  GK+      L
Sbjct: 376 AWRNIEQSGVKIDGTTITDKGLKLDA------GVYVVQVGKRRFARVTL 418


>gi|269303236|gb|ACZ33336.1| tyrosyl-tRNA synthetase [Chlamydophila pneumoniae LPCoLN]
          Length = 412

 Score =  398 bits (1022), Expect = e-108,   Method: Composition-based stats.
 Identities = 141/425 (33%), Positives = 217/425 (51%), Gaps = 33/425 (7%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           +L  L ER  +   +    LD +  +G + AY+G+D TA +LH GH   +  L  L   G
Sbjct: 4   WLQSLQERNILENFT--AGLDSV--EGPIAAYLGFDPTAPALHIGHWIGICFLKRLAALG 59

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
             PI+L+GG T ++GDPS +   R ++++ E+ +N +KI      ++          ++N
Sbjct: 60  ITPIALVGGATGMVGDPSGKQSERSLLQTSEVFDNSQKITACLQRYL------PGVTLVN 113

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  I  ID LR+IG  F + +ML+ ++++ R+  ++ +S+ EF+Y+ILQ+YDF  L
Sbjct: 114 NADWLQEISLIDFLRDIGKHFRLGQMLAKDTIKQRVHSDEGISYTEFSYLILQSYDFYHL 173

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            KNY   LQ GGSDQWGNI  GID   R    + + LT PLLT A G K+GKT SG +WL
Sbjct: 174 FKNYGTILQCGGSDQWGNITSGIDFIRRKGLGQAYGLTYPLLTNAQGKKIGKTESGTVWL 233

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           + ++TSP+  +QY   + D  +   A+ LT L   EI  + +    +    K+ +A +I 
Sbjct: 234 DSDLTSPFELYQYLLRLPDDTIPKIARTLTLLSNEEIQDIDRRVQTDPVAVKEFVAQDIL 293

Query: 308 TMVHGREEAEKA----------------ATAAMECFDMSIHSQHMPTISISKDEVSRGMG 351
             +HG    E+A                     E F   + +      S+ K EV  G  
Sbjct: 294 RAIHGDLGLEEALSVTRSMHPGNLSSLSEKDFHELFAGGMGA------SLDKSEV-LGKR 346

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
            L L +  G   S  E RR ++   + INN  I+NE    + QD      + L+ GKK  
Sbjct: 347 WLDLFLVLGLCKSKGEIRRLIEQKGVYINNVPIANEHSVCEEQDICYGHYVLLAQGKKRK 406

Query: 412 IICHL 416
           ++ +L
Sbjct: 407 LVLYL 411


>gi|253995573|ref|YP_003047637.1| tyrosyl-tRNA synthetase [Methylotenera mobilis JLW8]
 gi|253982252|gb|ACT47110.1| tyrosyl-tRNA synthetase [Methylotenera mobilis JLW8]
          Length = 399

 Score =  397 bits (1021), Expect = e-108,   Method: Composition-based stats.
 Identities = 97/405 (23%), Positives = 176/405 (43%), Gaps = 23/405 (5%)

Query: 15  RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLM 74
           RG    +     ++ L     +    G+D TA  LH GH   +  L   Q+ GHK + L+
Sbjct: 14  RGADELLIEAELVEKLKKGQPLKIKAGFDPTAPDLHLGHTVLINKLRQFQELGHKVLFLI 73

Query: 75  GGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCS 134
           G  T +IGDP+ +  +R  + ++++QEN +         +K         ++ N  WL  
Sbjct: 74  GDFTGMIGDPTGKSTTRPPLTAEQVQENAKTYTAQVFKILK----PEQTEVVFNSKWLNE 129

Query: 135 IKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCR 194
           +    +L+   S  +V RML  +    R K  Q ++  EF Y +LQ YD V L  +    
Sbjct: 130 LGAAGMLKLAASH-TVARMLERDDFSKRFKGNQPIAIHEFLYPLLQGYDSVALNAD---- 184

Query: 195 LQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTS 253
           +++GG+DQ  N++ G +L ++        LT PLL    G  KM K+L   I + +   +
Sbjct: 185 VELGGTDQKFNLLMGRELQKQAGQSPQCVLTMPLLEGLDGVNKMSKSLGNYIGIAE---A 241

Query: 254 PYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATEITTMVH 311
           P   +    +I D  +  + + L+   +  I +       G    + K   A EI    H
Sbjct: 242 PEIIFAKIMSISDELMWRYVELLSFESLETIAQWKADVANGSNPRDIKVRFAQEIVARFH 301

Query: 312 GREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRH 371
            + +AEKA                +P ++++ D  +  +G+  L+  AG   ST+EA R 
Sbjct: 302 SQADAEKALADFQTR-SKGGIPDDVPEVAVTID--AEQVGVAQLLKLAGLVASTSEAFRA 358

Query: 372 LKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           ++   +K++   ++++ L +         ++    GK+      +
Sbjct: 359 IEQGGVKLDGEKVTDKGLMLSKA-----SSVVAQVGKRKFANVTI 398


>gi|37680907|ref|NP_935516.1| tyrosyl-tRNA synthetase [Vibrio vulnificus YJ016]
 gi|320155426|ref|YP_004187805.1| tyrosyl-tRNA synthetase, cluster 1 [Vibrio vulnificus MO6-24/O]
 gi|326423868|ref|NP_760572.2| tyrosyl-tRNA synthetase [Vibrio vulnificus CMCP6]
 gi|81756673|sp|Q7MHZ4|SYY2_VIBVY RecName: Full=Tyrosyl-tRNA synthetase 2; AltName:
           Full=Tyrosine--tRNA ligase 2; Short=TyrRS 2
 gi|37199657|dbj|BAC95487.1| Tyrosyl-tRNA synthetase [Vibrio vulnificus YJ016]
 gi|319930738|gb|ADV85602.1| tyrosyl-tRNA synthetase cluster 1 [Vibrio vulnificus MO6-24/O]
 gi|319999241|gb|AAO10099.2| tyrosyl-tRNA synthetase [Vibrio vulnificus CMCP6]
          Length = 395

 Score =  397 bits (1021), Expect = e-108,   Method: Composition-based stats.
 Identities = 97/420 (23%), Positives = 177/420 (42%), Gaps = 28/420 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M + ++    I  +RG    I     +  L     +   +G D TA  +H GH   L  L
Sbjct: 1   MASIEAALAEI--KRGVEELIPEEELIAKLKEGRPLRIKLGADPTAPDIHLGHTVILNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GH    L+G  T ++GDP+ ++ +R  +  +++  N E  K      +     K
Sbjct: 59  RAFQDLGHDVTFLIGDFTGMVGDPTGKNSTRPPLTREDVLRNAETYKQQVFKILDPAKTK 118

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N  WL  +    ++R + +  +V RML  +  + R    Q ++  EF Y +LQ
Sbjct: 119 ----IQFNSEWLSELGAEGMIR-LAANQTVARMLERDDFKKRYAGGQPIAIHEFMYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGK 239
            YD V +    +  +++GG+DQ  N++ G +L +         L  PLL    G  KM K
Sbjct: 174 GYDSVAM----ETDVELGGTDQKFNLLMGRELQKANGQKPQVVLMMPLLVGLDGEKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINE 297
           + +  I +++   +P   +    +I D  + S+ + L+  P+ E+ +       GK   +
Sbjct: 230 SANNYIGVSE---APSEMFGKIMSISDDLMWSYYELLSFRPLEELAQFKADVAAGKNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A EI    H   +A+ A    +  F  +     MP  +      + G  +  L+ 
Sbjct: 287 IKVLLAKEIIARFHSEADADAAEQEFVNRFAKNQIPDEMPEFT-----FAAGTPMANLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           +A   +ST+EA R +K  A K++   + + K +  +      G      GK+      + 
Sbjct: 342 EAELCSSTSEAMRMVKQGAAKMDGEKVEDAKAEPAV------GTYVFQVGKRKFARITIA 395


>gi|254191511|ref|ZP_04898014.1| tyrosyl-tRNA synthetase [Burkholderia pseudomallei Pasteur 52237]
 gi|254260989|ref|ZP_04952043.1| tyrosine--tRNA ligase [Burkholderia pseudomallei 1710a]
 gi|115305797|sp|Q3JNS0|SYY_BURP1 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|157939182|gb|EDO94852.1| tyrosyl-tRNA synthetase [Burkholderia pseudomallei Pasteur 52237]
 gi|254219678|gb|EET09062.1| tyrosine--tRNA ligase [Burkholderia pseudomallei 1710a]
          Length = 413

 Score =  397 bits (1021), Expect = e-108,   Method: Composition-based stats.
 Identities = 98/416 (23%), Positives = 186/416 (44%), Gaps = 31/416 (7%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           K     +L E  F  +++         +   +   +G D TA  +H GH   L  +  LQ
Sbjct: 25  KRGVDELLIEEEFAQKLA-----KSAATDKPLRIKLGLDPTAPDIHLGHTVVLNKMRQLQ 79

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GH  I L+G  TS+IGDPS R+ +R  +  ++I+ N +      +  +     +    
Sbjct: 80  DLGHTVIFLIGDFTSLIGDPSGRNATRPPLTREQIESNAKTYFEQAALVLDRAKTE---- 135

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           +  N  W   +    +++ + S ++V RML  E    R +    +S  EF Y ++Q YD 
Sbjct: 136 IRYNSEWSMPLGADGMIK-LASRYTVARMLEREDFTKRFQGGIPISIHEFLYPLMQGYDS 194

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSG 243
           V L  +    L++GG+DQ  N++ G +L ++    +   LT PLL    G  KM K+   
Sbjct: 195 VALNAD----LELGGTDQKFNLLVGRELQKQYGQEQQCILTMPLLEGLDGVEKMSKSKGN 250

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKKI 301
            + ++++   P + +    +I D  +  + + L+   + EI R       G+   + K +
Sbjct: 251 YVGISEK---PTDMFGKLMSISDVLMWRYFELLSFRSLDEIARFRGEAEGGRNPRDFKVM 307

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGF 361
           +A EI    H + +AE+A                +P ++++       + +  L+ +AG 
Sbjct: 308 LAQEIVARFHSQADAERALEDF-NHRAKGGVPDDIPAVTLA----GAPLAIGQLLKQAGL 362

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
             ST+EA R+++   +KI+ + +S++ L++   +F       +  GK+      L 
Sbjct: 363 VPSTSEALRNIEQGGVKIDGATVSDKALKVDAGEF------VVQVGKRRFARVTLT 412


>gi|167837841|ref|ZP_02464724.1| tyrosyl-tRNA synthetase [Burkholderia thailandensis MSMB43]
          Length = 413

 Score =  397 bits (1021), Expect = e-108,   Method: Composition-based stats.
 Identities = 99/416 (23%), Positives = 188/416 (45%), Gaps = 31/416 (7%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           K     +L E  F  +++         +   +   +G D TA  +H GH   L  +  LQ
Sbjct: 25  KRGVDELLIEEEFAQKLA-----RSAATGKPLRIKLGLDPTAPDIHLGHTVVLNKMRQLQ 79

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GH  I L+G  TS+IGDPS R+ +R  +  ++I+ N +      +  +     +    
Sbjct: 80  DLGHTVIFLIGDFTSLIGDPSGRNATRPPLTREQIESNAKTYFEQAALVLDREKTE---- 135

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           +  N  W   +    +++ + S ++V RML  E    R +    +S  EF Y ++Q YD 
Sbjct: 136 IRYNSEWSMPLGADGMIK-LASRYTVARMLEREDFTKRFQGGIPISIHEFLYPLMQGYDS 194

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSG 243
           V L  +    L++GG+DQ  N++ G +L ++    +   LT PLL    G  KM K+   
Sbjct: 195 VALNAD----LELGGTDQKFNLLVGRELQKQYGQEQQCILTMPLLEGLDGVEKMSKSKGN 250

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKI 301
            + ++++   P + +    +I D  +  + + L+   + EI   R A   G+   + K +
Sbjct: 251 YVGISEK---PNDMFGKLMSISDVLMWRYFELLSFRSLDEIAQFRGAIEGGRNPRDFKVM 307

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGF 361
           +A EI    H + +AE+A                +P+++++       + +  L+ +AG 
Sbjct: 308 LAQEIVARFHSQTDAERALEDF-NHRAKGGVPDDIPSVTLA----GAPLAIGQLLKQAGL 362

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
             ST+EA R+++   +KI+ + +S++ L++   +F       +  GK+      L 
Sbjct: 363 VPSTSEALRNIEQGGVKIDGATVSDKALKVDAGEF------VVQVGKRRFARVTLT 412


>gi|53720512|ref|YP_109498.1| tyrosyl-tRNA synthetase [Burkholderia pseudomallei K96243]
 gi|126453181|ref|YP_001067643.1| tyrosyl-tRNA synthetase [Burkholderia pseudomallei 1106a]
 gi|167817370|ref|ZP_02449050.1| tyrosyl-tRNA synthetase [Burkholderia pseudomallei 91]
 gi|167847260|ref|ZP_02472768.1| tyrosyl-tRNA synthetase [Burkholderia pseudomallei B7210]
 gi|167912498|ref|ZP_02499589.1| tyrosyl-tRNA synthetase [Burkholderia pseudomallei 112]
 gi|242315664|ref|ZP_04814680.1| tyrosine--tRNA ligase [Burkholderia pseudomallei 1106b]
 gi|254194849|ref|ZP_04901279.1| tyrosyl-tRNA synthetase [Burkholderia pseudomallei S13]
 gi|254299232|ref|ZP_04966682.1| tyrosyl-tRNA synthetase [Burkholderia pseudomallei 406e]
 gi|81379101|sp|Q63QX0|SYY_BURPS RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|52210926|emb|CAH36914.1| tyrosyl-tRNA synthetase [Burkholderia pseudomallei K96243]
 gi|126226823|gb|ABN90363.1| tyrosyl-tRNA synthetase [Burkholderia pseudomallei 1106a]
 gi|157809052|gb|EDO86222.1| tyrosyl-tRNA synthetase [Burkholderia pseudomallei 406e]
 gi|169651598|gb|EDS84291.1| tyrosyl-tRNA synthetase [Burkholderia pseudomallei S13]
 gi|242138903|gb|EES25305.1| tyrosine--tRNA ligase [Burkholderia pseudomallei 1106b]
          Length = 413

 Score =  397 bits (1021), Expect = e-108,   Method: Composition-based stats.
 Identities = 98/416 (23%), Positives = 186/416 (44%), Gaps = 31/416 (7%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           K     +L E  F  +++         +   +   +G D TA  +H GH   L  +  LQ
Sbjct: 25  KRGVDELLIEEEFAQKLA-----KSAATDKPLRIKLGLDPTAPDIHLGHTVVLNKMRQLQ 79

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GH  I L+G  TS+IGDPS R+ +R  +  ++I+ N +      +  +     +    
Sbjct: 80  DLGHTVIFLIGDFTSLIGDPSGRNATRPPLTREQIESNAKTYFEQAALVLDREKTE---- 135

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           +  N  W   +    +++ + S ++V RML  E    R +    +S  EF Y ++Q YD 
Sbjct: 136 IRYNSEWSMPLGADGMIK-LASRYTVARMLEREDFTKRFQGGIPISIHEFLYPLMQGYDS 194

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSG 243
           V L  +    L++GG+DQ  N++ G +L ++    +   LT PLL    G  KM K+   
Sbjct: 195 VALNAD----LELGGTDQKFNLLVGRELQKQYGQEQQCILTMPLLEGLDGVEKMSKSKGN 250

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKKI 301
            + ++++   P + +    +I D  +  + + L+   + EI R       G+   + K +
Sbjct: 251 YVGISEK---PTDMFGKLMSISDVLMWRYFELLSFRSLDEIARFRGEAEGGRNPRDFKVM 307

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGF 361
           +A EI    H + +AE+A                +P ++++       + +  L+ +AG 
Sbjct: 308 LAQEIVARFHSQADAERALEDF-NHRAKGGVPDDIPAVTLA----GAPLAIGQLLKQAGL 362

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
             ST+EA R+++   +KI+ + +S++ L++   +F       +  GK+      L 
Sbjct: 363 VPSTSEALRNIEQGGVKIDGATVSDKALKVDAGEF------VVQVGKRRFARVTLT 412


>gi|167825777|ref|ZP_02457248.1| tyrosyl-tRNA synthetase [Burkholderia pseudomallei 9]
 gi|254180683|ref|ZP_04887281.1| tyrosyl-tRNA synthetase [Burkholderia pseudomallei 1655]
 gi|184211222|gb|EDU08265.1| tyrosyl-tRNA synthetase [Burkholderia pseudomallei 1655]
          Length = 413

 Score =  397 bits (1020), Expect = e-108,   Method: Composition-based stats.
 Identities = 98/416 (23%), Positives = 186/416 (44%), Gaps = 31/416 (7%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           K     +L E  F  +++         +   +   +G D TA  +H GH   L  +  LQ
Sbjct: 25  KRGVDELLIEEEFAQKLA-----KSAATGKPLRIKLGLDPTAPDIHLGHTVVLNKMRQLQ 79

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GH  I L+G  TS+IGDPS R+ +R  +  ++I+ N +      +  +     +    
Sbjct: 80  DLGHTVIFLIGDFTSLIGDPSGRNATRPPLTREQIESNAKTYFEQAALVLDRAKTE---- 135

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           +  N  W   +    +++ + S ++V RML  E    R +    +S  EF Y ++Q YD 
Sbjct: 136 IRYNSEWSMPLGADGMIK-LASRYTVARMLEREDFTKRFQGGIPISIHEFLYPLMQGYDS 194

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSG 243
           V L  +    L++GG+DQ  N++ G +L ++    +   LT PLL    G  KM K+   
Sbjct: 195 VALNAD----LELGGTDQKFNLLVGRELQKQYGQEQQCILTMPLLEGLDGVEKMSKSKGN 250

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKKI 301
            + ++++   P + +    +I D  +  + + L+   + EI R       G+   + K +
Sbjct: 251 YVGISEK---PTDMFGKLMSISDVLMWRYFELLSFRSLDEIARFRGEAEGGRNPRDFKVM 307

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGF 361
           +A EI    H + +AE+A                +P ++++       + +  L+ +AG 
Sbjct: 308 LAQEIVARFHSQADAERALEDF-NHRAKGGVPDDIPAVTLA----GAPLAIGQLLKQAGL 362

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
             ST+EA R+++   +KI+ + +S++ L++   +F       +  GK+      L 
Sbjct: 363 VPSTSEALRNIEQGGVKIDGATVSDKALKVDAGEF------VVQVGKRRFARVTLT 412


>gi|53726205|ref|YP_103906.1| tyrosyl-tRNA synthetase [Burkholderia mallei ATCC 23344]
 gi|67642310|ref|ZP_00441068.1| tyrosine--tRNA ligase [Burkholderia mallei GB8 horse 4]
 gi|121598440|ref|YP_991612.1| tyrosyl-tRNA synthetase [Burkholderia mallei SAVP1]
 gi|124383776|ref|YP_001027108.1| tyrosyl-tRNA synthetase [Burkholderia mallei NCTC 10229]
 gi|126449804|ref|YP_001082053.1| tyrosyl-tRNA synthetase [Burkholderia mallei NCTC 10247]
 gi|167000498|ref|ZP_02266310.1| tyrosine--tRNA ligase [Burkholderia mallei PRL-20]
 gi|167721181|ref|ZP_02404417.1| tyrosyl-tRNA synthetase [Burkholderia pseudomallei DM98]
 gi|167895847|ref|ZP_02483249.1| tyrosyl-tRNA synthetase [Burkholderia pseudomallei 7894]
 gi|167920449|ref|ZP_02507540.1| tyrosyl-tRNA synthetase [Burkholderia pseudomallei BCC215]
 gi|217420944|ref|ZP_03452449.1| tyrosine--tRNA ligase [Burkholderia pseudomallei 576]
 gi|254178767|ref|ZP_04885421.1| tyrosyl-tRNA synthetase [Burkholderia mallei ATCC 10399]
 gi|254202618|ref|ZP_04908981.1| tyrosyl-tRNA synthetase [Burkholderia mallei FMH]
 gi|254207957|ref|ZP_04914307.1| tyrosyl-tRNA synthetase [Burkholderia mallei JHU]
 gi|254355903|ref|ZP_04972181.1| tyrosyl-tRNA synthetase [Burkholderia mallei 2002721280]
 gi|81604347|sp|Q62HB4|SYY_BURMA RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|52429628|gb|AAU50221.1| tyrosyl-tRNA synthetase [Burkholderia mallei ATCC 23344]
 gi|121227250|gb|ABM49768.1| tyrosyl-tRNA synthetase [Burkholderia mallei SAVP1]
 gi|124291796|gb|ABN01065.1| tyrosine--tRNA ligase [Burkholderia mallei NCTC 10229]
 gi|126242674|gb|ABO05767.1| tyrosine--tRNA ligase [Burkholderia mallei NCTC 10247]
 gi|147746865|gb|EDK53942.1| tyrosyl-tRNA synthetase [Burkholderia mallei FMH]
 gi|147751851|gb|EDK58918.1| tyrosyl-tRNA synthetase [Burkholderia mallei JHU]
 gi|148024878|gb|EDK83056.1| tyrosyl-tRNA synthetase [Burkholderia mallei 2002721280]
 gi|160694681|gb|EDP84689.1| tyrosyl-tRNA synthetase [Burkholderia mallei ATCC 10399]
 gi|217396356|gb|EEC36373.1| tyrosine--tRNA ligase [Burkholderia pseudomallei 576]
 gi|238523438|gb|EEP86876.1| tyrosine--tRNA ligase [Burkholderia mallei GB8 horse 4]
 gi|243063553|gb|EES45739.1| tyrosine--tRNA ligase [Burkholderia mallei PRL-20]
          Length = 413

 Score =  397 bits (1020), Expect = e-108,   Method: Composition-based stats.
 Identities = 98/416 (23%), Positives = 186/416 (44%), Gaps = 31/416 (7%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           K     +L E  F  +++         +   +   +G D TA  +H GH   L  +  LQ
Sbjct: 25  KRGVDELLIEEEFAQKLA-----KSAATGKPLRIKLGLDPTAPDIHLGHTVVLNKMRQLQ 79

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GH  I L+G  TS+IGDPS R+ +R  +  ++I+ N +      +  +     +    
Sbjct: 80  DLGHTVIFLIGDFTSLIGDPSGRNATRPPLTREQIESNAKTYFEQAALVLDREKTE---- 135

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           +  N  W   +    +++ + S ++V RML  E    R +    +S  EF Y ++Q YD 
Sbjct: 136 IRYNSEWSMPLGADGMIK-LASRYTVARMLEREDFTKRFQGGIPISIHEFLYPLMQGYDS 194

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSG 243
           V L  +    L++GG+DQ  N++ G +L ++    +   LT PLL    G  KM K+   
Sbjct: 195 VALNAD----LELGGTDQKFNLLVGRELQKQYGQEQQCILTMPLLEGLDGVEKMSKSKGN 250

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKKI 301
            + ++++   P + +    +I D  +  + + L+   + EI R       G+   + K +
Sbjct: 251 YVGISEK---PTDMFGKLMSISDVLMWRYFELLSFRSLDEIARFRGEAEGGRNPRDFKVM 307

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGF 361
           +A EI    H + +AE+A                +P ++++       + +  L+ +AG 
Sbjct: 308 LAQEIVARFHSQADAERALEDF-NHRAKGGVPDDIPAVTLA----GAPLAIGQLLKQAGL 362

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
             ST+EA R+++   +KI+ + +S++ L++   +F       +  GK+      L 
Sbjct: 363 VPSTSEALRNIEQGGVKIDGATVSDKALKVDAGEF------VVQVGKRRFARVTLT 412


>gi|262401671|ref|ZP_06078237.1| tyrosyl-tRNA synthetase [Vibrio sp. RC586]
 gi|262352088|gb|EEZ01218.1| tyrosyl-tRNA synthetase [Vibrio sp. RC586]
          Length = 395

 Score =  397 bits (1020), Expect = e-108,   Method: Composition-based stats.
 Identities = 99/419 (23%), Positives = 175/419 (41%), Gaps = 28/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M + ++    I  +RG    I     +  L     +   +G D TA  +H GH   L  L
Sbjct: 1   MASIEAALAEI--KRGVEELIPEEELIAKLKENRPLRIKLGADPTAPDIHLGHTVILNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GH    L+G  T ++GDP+ ++ +R  +  +++  N E  K      +     K
Sbjct: 59  RTFQDLGHDVTFLIGDFTGMVGDPTGKNTTRPPLTREDVLRNAETYKQQVFKILDPAKTK 118

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N  WL  +    ++R + S  +V RML  +  + R    Q ++  EF Y +LQ
Sbjct: 119 ----IQFNSEWLSQLGAEGMIR-LASNQTVARMLERDDFKKRYNNGQPIAIHEFMYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGK 239
            YD V +    +  +++GG+DQ  N++ G +L +         L  PLL    G  KM K
Sbjct: 174 GYDSVAM----ETDVELGGTDQKFNLLMGRELQKSNGQKPQVVLMMPLLVGLDGEKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINE 297
           +    I +++   +P   +    +I D  + S+ + L+  P+ +I +       G    +
Sbjct: 230 SAHNYIGVSE---APSEMFGKIMSISDDLMWSYYELLSFRPLEQIAQFKADVKNGTNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A EI    H   +A+ A    +  F      + MP       E + G+ +  L+ 
Sbjct: 287 IKILLAKEIIARFHSESDADAAEQEFINRFQKGAMPEEMPEF-----EFATGIAISNLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            AG   ST++A R +K  A+K++   + + KL          G      GK+      +
Sbjct: 342 DAGLVGSTSDALRMIKQGAVKLDGEKLEDAKLVPAC------GTSVYQVGKRKFARVTI 394


>gi|328914623|gb|AEB55456.1| tyrosyl-tRNA synthetase [Chlamydophila psittaci 6BC]
          Length = 433

 Score =  397 bits (1020), Expect = e-108,   Method: Composition-based stats.
 Identities = 135/422 (31%), Positives = 216/422 (51%), Gaps = 25/422 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           DF+  L +RG +   S+   LD + +   V+AY+G+D TA SLH GH   +  L  +   
Sbjct: 24  DFIQHLQDRGILENFSS--GLDSVST--PVSAYLGFDPTAPSLHIGHWIGICFLRRMASF 79

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           G  P++L+G  T +IGDPS +   R ++   ++  N +K+    S ++          ++
Sbjct: 80  GITPVALVGSATGMIGDPSGKSIERTLLEESQVAYNSQKLSECLSRYL------PGLQIV 133

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL     ID LR++G  F +  ML  ++V+ R++ E+ +S+ EF+YM+LQ+YDF  
Sbjct: 134 NNMDWLKETTVIDFLRDVGKHFRLGAMLGKDTVKQRVQSEEGISYTEFSYMLLQSYDFAY 193

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L + +   LQ GGSDQWGNI  GID   RL   + + LT PLLT + G K+GKT SG IW
Sbjct: 194 LFEKHGVCLQCGGSDQWGNITSGIDYIRRLGLGQAYGLTYPLLTNSQGKKIGKTESGTIW 253

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           L+ ++TS Y  +QY+  + D +V   A+ LT L   EI  + +    +    KK +A  I
Sbjct: 254 LDPKLTSAYELYQYFLRLPDQEVPKVARTLTLLSNEEIFDLDQKFLLDPVAVKKFVAETI 313

Query: 307 TTMVHGREEAEKAA------------TAAMECFDMSIHSQHMPTISISKDEVSRGMGLLT 354
            T +HG +   +A             + + + F   I       +S+ + + + G   + 
Sbjct: 314 VTSIHGEDGLREAQIVTQSMHPGKVSSVSEKDFQDLIAMGQ--GVSLERAQ-ALGKRWID 370

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           L V  G  +S  EARR ++   + +N+  I NE    +         + L+ GKK  ++ 
Sbjct: 371 LFVTLGVCSSKGEARRLIEQKGLYVNSEPIENEHSVCEETQVCFDQYVLLAQGKKKKLVL 430

Query: 415 HL 416
            L
Sbjct: 431 RL 432


>gi|39996241|ref|NP_952192.1| tyrosyl-tRNA synthetase [Geobacter sulfurreducens PCA]
 gi|81702779|sp|Q74E25|SYY_GEOSL RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|39983121|gb|AAR34515.1| tyrosyl-tRNA synthetase [Geobacter sulfurreducens PCA]
 gi|298505252|gb|ADI83975.1| tyrosyl-tRNA synthetase [Geobacter sulfurreducens KN400]
          Length = 403

 Score =  397 bits (1020), Expect = e-108,   Method: Composition-based stats.
 Identities = 99/387 (25%), Positives = 174/387 (44%), Gaps = 23/387 (5%)

Query: 35  VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMM 94
            +    G+D TA  LH GH   L  +   Q+ GH+ I L+G  T +IGDP+ + E+R+ +
Sbjct: 36  PLKIKAGFDPTAPDLHLGHTVLLHKMRQFQQLGHEVIFLIGDFTGMIGDPTGKSETRKAL 95

Query: 95  RSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRML 154
             +++  N E  K      +     +    +  N  WL  +    ++  + + ++V RML
Sbjct: 96  SREDVLRNAETYKEQVFKILDPEKTR----VAFNSEWLAKLDAGGMIG-LAAKYTVARML 150

Query: 155 SFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
             +    R   +  +S  EF Y ++Q YD V L  +    +++GG+DQ  N++ G +L  
Sbjct: 151 ERDDFGKRFANQLPISIHEFLYPLIQGYDSVALQAD----VELGGTDQKFNLLVGRELQR 206

Query: 215 RLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFA 273
                    +T PLL    G  KM K+L   I +N+        +    +I D  ++ + 
Sbjct: 207 EWGQTPQTVITMPLLEGLDGVNKMSKSLGNYIGINEPAD---EIFGKIMSISDELMLRYY 263

Query: 274 KRLTTLPMSEIDRMA---KLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMS 330
           + L+ L M+EID M    +       EAKK +  E+    HG   A  A    ++ F  +
Sbjct: 264 ELLSDLSMAEIDGMRTGIRDGSVHPMEAKKQLGREVVARYHGAAAATDAEEHFVKRFRDN 323

Query: 331 IHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQ 390
                MP ++++  +    + L  L+ +AG   S +E RR ++   +K+N   +S+E L+
Sbjct: 324 QTPDEMPELTLAATD--EKVALCRLLAEAGLVKSNSEGRRAIQQGGVKVNGEKVSDESLE 381

Query: 391 IKLQDFDSTGNIKLSFGKKNHIICHLC 417
           +       TG   + FGK+        
Sbjct: 382 LAA-----TGVYVIQFGKRRFARITFA 403


>gi|78222398|ref|YP_384145.1| tyrosyl-tRNA synthetase [Geobacter metallireducens GS-15]
 gi|115305806|sp|Q39WF4|SYY_GEOMG RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|78193653|gb|ABB31420.1| tyrosyl-tRNA synthetase [Geobacter metallireducens GS-15]
          Length = 403

 Score =  397 bits (1020), Expect = e-108,   Method: Composition-based stats.
 Identities = 99/384 (25%), Positives = 174/384 (45%), Gaps = 23/384 (5%)

Query: 35  VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMM 94
            +    G+D TA  LH GH   L  +   Q+ GH+   L+G  T +IGDP+ + E+R+ +
Sbjct: 36  PLRIKAGFDPTAPDLHLGHTVLLHKMRQFQQLGHEVCFLIGDFTGMIGDPTGKSETRKAL 95

Query: 95  RSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRML 154
             +++ +N E  K      +          ++ N  WL  +   D++  + +  +V RML
Sbjct: 96  TREDVLKNAETYKEQVFKILD----PKKTRVVFNSEWLGKMTASDMIG-LAAQSTVARML 150

Query: 155 SFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
             +    R   +  +S  EF Y ++Q YD V L  +    +++GG+DQ  N++ G +L  
Sbjct: 151 ERDDFGKRFANQLPISIHEFLYPLIQGYDSVALKAD----VELGGTDQKFNLLVGRELQR 206

Query: 215 RLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFA 273
             K      +T PLL    G  KM K+L   I +N+        +    +I D  ++ + 
Sbjct: 207 VWKQSPQSVITMPLLEGLDGVNKMSKSLGNYIGINEPAD---EIFGKIMSISDELMLRYY 263

Query: 274 KRLTTLPMSEIDRMAKL---QGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMS 330
           + L+ L ++EI+++             AKK +A EI    HG   A+ A  + +  F  +
Sbjct: 264 ELLSDLTLAEIEKLKAAMRDGDVHPMAAKKQLAREIVARYHGAVAADNAEESFVRRFRDN 323

Query: 331 IHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQ 390
              + MP   +S +E    + L  L+ +AG   S +E RR +    +K+N   ++N+ L+
Sbjct: 324 QTPEEMPECILSAEE--GKVLLGRLLAEAGLVKSNSEGRRAINQGGVKVNGEKVTNDMLE 381

Query: 391 IKLQDFDSTGNIKLSFGKKNHIIC 414
           +        G   L FGK+     
Sbjct: 382 LP-----GVGEYVLQFGKRRFARI 400


>gi|206890846|ref|YP_002248124.1| tyrosyl-tRNA synthetase [Thermodesulfovibrio yellowstonii DSM
           11347]
 gi|206742784|gb|ACI21841.1| tyrosyl-tRNA synthetase [Thermodesulfovibrio yellowstonii DSM
           11347]
          Length = 404

 Score =  397 bits (1020), Expect = e-108,   Method: Composition-based stats.
 Identities = 110/414 (26%), Positives = 195/414 (47%), Gaps = 28/414 (6%)

Query: 11  ILSERGFIHQISNPRELDIL----CSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
            + +RG +  I        L      +  +   +G+D TA  +H GH   L  +   Q+ 
Sbjct: 9   EIIKRGTVEIILEEDLKKKLEKAYKDKKPLRIKVGFDPTAPDIHLGHTVLLEKMRQFQEL 68

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+ I L+G  T +IGDPS + E+R+ +  +E+ +N E  K      +          + 
Sbjct: 69  GHEVIFLIGDFTGMIGDPSGKTETRKPLTREEVLKNAETYKEQVFKIL----HPEKTDIR 124

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
            N  W  S+  +D+ R  G+  +V RML  E  + R    + ++ LEF Y +LQAYD V 
Sbjct: 125 FNSEWFASMTALDMCRLAGAE-TVARMLEREDFKKRFTEGRPITILEFLYPLLQAYDSVY 183

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAI 245
           L  +    +++GG+DQ  N++ G  L +     +   +T PLL    G  KM K+L   I
Sbjct: 184 LKAD----IELGGTDQKFNLLMGRQLMKMYGMEEQVIITMPLLEGLDGVQKMSKSLGNYI 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKII 302
            +N+    P   +    +I+D  ++ + + L+ + + E++ +    K       +AK+ +
Sbjct: 240 GINE---PPDEMFGKLMSINDELMLKYYELLSHISIEELNELKTGIKEGRINPRDAKESL 296

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFA 362
           A EI    HGRE AEKA    +  F      + + T+ I ++   +G+ L  ++ ++G  
Sbjct: 297 AFEIVNRYHGREYAEKARENFIRLFRKREIPEEIETVEIKEE--KQGVWLPKILKESGII 354

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            ST+EA R +K   I++N+  I+N  +++        G   +  GK+  I   +
Sbjct: 355 KSTSEAVRLIKQGGIRVNDEQITNPDIKLTA------GEYIVRIGKRRFIKIKV 402


>gi|212704211|ref|ZP_03312339.1| hypothetical protein DESPIG_02266 [Desulfovibrio piger ATCC 29098]
 gi|212672415|gb|EEB32898.1| hypothetical protein DESPIG_02266 [Desulfovibrio piger ATCC 29098]
          Length = 399

 Score =  397 bits (1020), Expect = e-108,   Method: Composition-based stats.
 Identities = 96/408 (23%), Positives = 172/408 (42%), Gaps = 27/408 (6%)

Query: 15  RGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG + ++ + +EL     +G  +   +G+D TA  LH GH   +  +   Q+ GH+ I L
Sbjct: 13  RG-VAELIDEKELRKKLERGTPLRVKVGFDPTAPDLHLGHTVVMHKMRHFQELGHQIIFL 71

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
           +G  T  IGDP+ R E+R  +  +++  N E  K      +         ++  N  WL 
Sbjct: 72  IGDFTGRIGDPTGRSETRPPLTEEQVIANAETYKKQVFKILD----PEKTIVEFNSHWLG 127

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDC 193
            +   D +R + S ++V RM+  +    R + ++ +S  EF Y + Q YD V L  +   
Sbjct: 128 KMDASDFIR-LASSYTVARMMERDDFEKRFREQRPISIHEFIYPLCQGYDSVALKAD--- 183

Query: 194 RLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMT 252
            ++MGG+DQ  N++ G +L           LT PLL    G  KM K+    I +++   
Sbjct: 184 -VEMGGTDQKFNLLVGRNLQAHYGMESQCILTMPLLEGLDGVRKMSKSYGNYIGIDE--- 239

Query: 253 SPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID---RMAKLQGKEINEAKKIIATEITTM 309
           +P   +     I D  +  + + L+   + EI                AK+++A E+ + 
Sbjct: 240 APSEIFGKVMAISDELMWRYYELLSFKSLEEIATLKEDVAQGRVHPKAAKEMLAHEMVSR 299

Query: 310 VHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEAR 369
            H  ++A++A       F         P  + ++ + S     L     AG   S  EA+
Sbjct: 300 YHSEKDADEARQGFNAVFASGGVPDDAPCHTCAQGDDSTPPAFLE---AAGLVKSRGEAK 356

Query: 370 RHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           R +K  A+ ++     +    +        G   +  GKK  +   + 
Sbjct: 357 RLIKEGALSVDGQRCDDAMSPLAA------GEYVIKLGKKRFLRLTVT 398


>gi|33593889|ref|NP_881533.1| tyrosyl-tRNA synthetase [Bordetella pertussis Tohama I]
 gi|81424580|sp|Q7VUW5|SYY_BORPE RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|33563963|emb|CAE43226.1| tyrosyl-tRNA synthetase [Bordetella pertussis Tohama I]
 gi|332383308|gb|AEE68155.1| tyrosyl-tRNA synthetase [Bordetella pertussis CS]
          Length = 409

 Score =  397 bits (1020), Expect = e-108,   Method: Composition-based stats.
 Identities = 98/387 (25%), Positives = 175/387 (45%), Gaps = 25/387 (6%)

Query: 35  VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMM 94
            +   +G D TA  +H GH   L  +  LQ  GH  I L+G  TS IGDPS R+ +R  +
Sbjct: 45  PLRIKLGLDPTAPDIHLGHTVVLNKMRQLQDLGHNVIFLIGDFTSTIGDPSGRNSTRPPL 104

Query: 95  RSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRML 154
             ++I+ N +      S  +     +    +  N  W   +    ++ ++ S ++V RM+
Sbjct: 105 TREQIETNAKTYYAQASLVLDPARTE----IRYNSEWCDPLGARGMI-QLASRYTVARMM 159

Query: 155 SFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
             E    R K    ++  EF Y +LQ YD V L  +    L++GG+DQ  N++ G +L +
Sbjct: 160 EREDFTRRFKGGVPIAVHEFLYPLLQGYDSVALKAD----LELGGTDQKFNLLVGRELQK 215

Query: 215 RLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFA 273
                +   LT PLL    G  KM K+    I +++   +P + +    +I D  +  + 
Sbjct: 216 EYGQEQQCILTMPLLVGTDGVEKMSKSKGNYIGISE---APESMFGKLMSISDTLMWRYY 272

Query: 274 KRLTTLPMSEIDRMAKL--QGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSI 331
           + L+   +++I  +      G+   +AK  +A EI    H  + AE A  A    F    
Sbjct: 273 ELLSFRSLADIAALKAEIDGGRNPRDAKVALAQEIVARFHSPQAAEAALAAFEARFRDGA 332

Query: 332 HSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
             + MP +++         G+L ++ +AG   S +EA+R+++   +++N   + ++ LQ+
Sbjct: 333 IPEDMPEVTVG----GAPQGILRILREAGLVASGSEAQRNVEQGGVRVNGDRVEDKSLQL 388

Query: 392 KLQDFDSTGNIKLSFGKKNHIICHLCG 418
                   G   +  GK+      L G
Sbjct: 389 SA------GTYVVQVGKRKFARVKLVG 409


>gi|167622979|ref|YP_001673273.1| tyrosyl-tRNA synthetase [Shewanella halifaxensis HAW-EB4]
 gi|167353001|gb|ABZ75614.1| tyrosyl-tRNA synthetase [Shewanella halifaxensis HAW-EB4]
          Length = 398

 Score =  397 bits (1020), Expect = e-108,   Method: Composition-based stats.
 Identities = 101/419 (24%), Positives = 178/419 (42%), Gaps = 25/419 (5%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M   +     I  +RG    +     L+ L     +   +G D TA  +H GH   L  +
Sbjct: 1   MADLEQALAEI--KRGTDEILLEADLLEKLKEGRPLKIKLGADPTAPDIHLGHTVILNKM 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+ I L+G  T ++GDPS ++ +R  +  +++  N E  K      +     +
Sbjct: 59  RTFQELGHEVIFLIGDFTGMVGDPSGKNSTRPPLTREQVLANAETYKQQVYKILDPAKTR 118

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N TWL  +    ++R + S  +V RM+  +  + R    QS++  EF Y +LQ
Sbjct: 119 ----IEFNSTWLEPLGAAGMIR-LASQQTVARMMERDDFKKRYASGQSIAIHEFMYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGK 239
            YD V L    +  +++GG+DQ  N++ G +L +         +  PLL    G  KM K
Sbjct: 174 GYDSVAL----EADVELGGTDQKFNLLMGRELQKSAGQKPQTVIMMPLLEGLDGVKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINE 297
           +    I +++        +    +I D  +  + + L+  P++EI++       G    +
Sbjct: 230 SAHNYIGVSEPAG---EMFGKIMSISDVLMWRYFELLSFRPLTEIEQFKADVEAGANPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K  +A EI    H    AE A    +  F        +  + I+  E   G+ +  L+ 
Sbjct: 287 VKIALAKEIIARFHDEASAEAAHQEFISRFQKGNIPDDIEELEIAAGE---GIAIANLLK 343

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +AG  +ST++A R +K  A KI+   I + +LQ+               GK+      L
Sbjct: 344 EAGLVSSTSDAMRMIKQGAAKIDGDKIEDTRLQLTA-----GTTAVFQVGKRKFAKITL 397


>gi|148263175|ref|YP_001229881.1| tyrosyl-tRNA synthetase [Geobacter uraniireducens Rf4]
 gi|146396675|gb|ABQ25308.1| tyrosyl-tRNA synthetase [Geobacter uraniireducens Rf4]
          Length = 403

 Score =  397 bits (1020), Expect = e-108,   Method: Composition-based stats.
 Identities = 103/416 (24%), Positives = 189/416 (45%), Gaps = 30/416 (7%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFW 62
            K   + IL E+  I       +L+     G  +    G+D TA  LH GH   L  +  
Sbjct: 10  IKRGAMEILLEKELI------EKLEKSLKTGVPLKIKAGFDPTAPDLHFGHTVLLHKMRQ 63

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD 122
            Q+ GH+   L+G  T +IGDP+ + E+R+++  +++ +N E  K      +     K  
Sbjct: 64  FQQLGHEIYFLIGDFTGMIGDPTGKSETRKVLTREDVLKNAETYKEQVFKILDPEKTK-- 121

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
             ++ N  WL  +   D++  + S ++V RML  E   +R   +  +S  EF Y ++Q Y
Sbjct: 122 --VVFNSEWLGKLTASDMIG-LASKYTVARMLEREDFSNRFSNQLPISIHEFMYPLVQGY 178

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTL 241
           D V L  +    +++GG+DQ  N++ G +L      P    +T PLL    G  KM K+L
Sbjct: 179 DSVALKAD----VELGGTDQKFNLLVGRELQREWGQPPQTVITMPLLEGLDGVNKMSKSL 234

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEA 298
              I +N+        +    +I D  +  + + L+ + ++E++++    K       E 
Sbjct: 235 GNYIGINEPAD---EIFGKIMSISDELMFRYYELLSDMSLAELEQLKGDLKNGAAHPMEV 291

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVK 358
           KK +  E+ +  HG + A++A    ++ F  +     M +I++S       + L  ++  
Sbjct: 292 KKRLGREMVSRYHGNKAADEAEANFVKRFRDNQMPDEMISITLSAA--GEKILLGKVLAG 349

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           AG   S +E RR ++   +K+N   I+++ L++        G   L  GK+     
Sbjct: 350 AGLVKSNSEGRRAIQQGGVKVNGEKITDDNLELVCM-----GEYVLQVGKRRFAKV 400


>gi|253997780|ref|YP_003049843.1| tyrosyl-tRNA synthetase [Methylovorus sp. SIP3-4]
 gi|253984459|gb|ACT49316.1| tyrosyl-tRNA synthetase [Methylovorus sp. SIP3-4]
          Length = 400

 Score =  396 bits (1019), Expect = e-108,   Method: Composition-based stats.
 Identities = 104/419 (24%), Positives = 181/419 (43%), Gaps = 25/419 (5%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M A   D    L +RG    +     ++ L     +    G+D TA  LH GH   L  L
Sbjct: 1   MRALNEDLA--LIKRGCDELLIEQELVEKLKLGRPLRVKAGFDPTAPDLHLGHTVLLNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             LQ+ GH  + L+G  T +IGDP+ +  +R  + ++++QEN +  +      +K     
Sbjct: 59  RQLQELGHHVLFLIGDFTGMIGDPTGKSATRPPLTAEQVQENAKSYEAQVFKILK----P 114

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               ++ N  W+  +    +L+   +  +V RML  +    R K  Q ++  EF Y +LQ
Sbjct: 115 EQTEVVFNSAWISQLGAAGMLKLAATH-TVARMLERDDFSKRYKNNQPIAIHEFLYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGK 239
            YD VEL  +    L++GG+DQ  N++ G +L +         LT PLL    G  KM K
Sbjct: 174 GYDSVELKAD----LELGGTDQKFNLLMGRELQKHYGQSPQCVLTMPLLEGLDGVNKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINE 297
           +L   I + +      + +    +I D  +  + + L+   M  I    +    G+    
Sbjct: 230 SLGNYIGIAEPAN---DIFSKLMSISDTLMWRYIELLSFESMETIASWKQSVEAGENPRN 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K   A E+ T  H  E AE+A                +P +SI+  +    +G+  L+ 
Sbjct: 287 IKVRFAQELVTRFHSAEAAEQALADF-SLRSKGGIPDDVPEVSIALAQ--DRIGIAALLK 343

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +AG   ST+EA R ++   +K+++  + ++ LQ+          +    GK+      +
Sbjct: 344 QAGLVASTSEALRMIEQGGVKLDSEKVEDKALQLGA-----GVTVVAQVGKRKFARITI 397


>gi|206561682|ref|YP_002232447.1| tyrosyl-tRNA synthetase [Burkholderia cenocepacia J2315]
 gi|198037724|emb|CAR53667.1| tyrosyl-tRNA synthetase [Burkholderia cenocepacia J2315]
          Length = 413

 Score =  396 bits (1019), Expect = e-108,   Method: Composition-based stats.
 Identities = 96/416 (23%), Positives = 188/416 (45%), Gaps = 31/416 (7%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           K     +L E  F  +++         +   +   +G D TA  +H GH   L  +  LQ
Sbjct: 25  KRGVDELLIEEEFAQKLA-----RSAATGTPLRIKLGLDPTAPDIHIGHTVVLNKMRQLQ 79

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GH  I L+G  TS+IGDPS R+ +R  +  ++I+ N +      +  +     +    
Sbjct: 80  DLGHTVIFLIGDFTSLIGDPSGRNATRPPLTREQIESNAKTYFEQAALVLDRDKTE---- 135

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           +  N  W   +    +++ + S ++V R+L  E    R +    +S  EF Y ++Q YD 
Sbjct: 136 IRYNSEWSMPLGADGMIK-LASRYTVARILEREDFTKRFQGGVPISIHEFLYPLMQGYDS 194

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSG 243
           V L  +    L++GG+DQ  N++ G +L ++    +   LT PLL    G  KM K+   
Sbjct: 195 VALNAD----LELGGTDQKFNLLVGRELQKQYGQEQQCILTMPLLEGLDGVEKMSKSKGN 250

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKI 301
            + ++++   P + +    +I D  +  + + L+   + EI   +     G+   + K +
Sbjct: 251 YVGISEK---PTDMFGKLMSISDTLMWRYFELLSFRSLDEIAGFKREAEGGRNPRDFKVL 307

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGF 361
           +A EI    H + +AE+A                +P+++++       + +  L+ +AG 
Sbjct: 308 LAQEIVARFHSQPDAERALEDF-NHRAKGGVPDDIPSVTLA----GAPLAIGQLLKQAGL 362

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
             ST+EA R+++   +KI+ + +S++ L+++  +F       +  GK+      L 
Sbjct: 363 VPSTSEALRNIEQGGVKIDGATVSDKGLKVEAGEF------VVQVGKRRFARVTLT 412


>gi|260775438|ref|ZP_05884335.1| tyrosyl-tRNA synthetase [Vibrio coralliilyticus ATCC BAA-450]
 gi|260608619|gb|EEX34784.1| tyrosyl-tRNA synthetase [Vibrio coralliilyticus ATCC BAA-450]
          Length = 395

 Score =  396 bits (1019), Expect = e-108,   Method: Composition-based stats.
 Identities = 99/419 (23%), Positives = 183/419 (43%), Gaps = 28/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M + ++    I  +RG    I     ++ L     +   +G D TA  +H GH      L
Sbjct: 1   MASIEAALAEI--KRGVEELIPEEELIEKLKENRPLRIKLGADPTAPDIHLGHTVIFNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+   L+G  T+++GDP+ ++ +R  +  +++  N E  K      +     K
Sbjct: 59  RLFQELGHEVTFLIGDFTAMVGDPTGKNSTRPPLSREDVLRNAETYKEQVFKILDPAKTK 118

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N  WL  +    ++R + +  +V RML  +  + R    Q ++  EF Y +LQ
Sbjct: 119 ----IQFNSEWLSELGAEGMIR-LAANQTVARMLERDDFKKRYAGGQPIAIHEFMYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGK 239
            +D V +    +  +++GG+DQ  N++ G +L +         L  PLL    G  KM K
Sbjct: 174 GWDSVAM----ETDVELGGTDQKFNLLMGRELQKANGQKPQAVLMMPLLVGLDGEKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINE 297
           + +  I +++   +P   +    +I D  + S+ + L+  P+ EI++      +GK   +
Sbjct: 230 SANNYIGISE---APSEMFGKIMSISDDLMWSYYELLSFRPLEEIEQFKASIAEGKNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A EI    H   +A+ A    +  F  +     MP       E   G+ +  L+ 
Sbjct: 287 IKVLLAKEIIARFHSEADADAAEQEFVNRFAKNQIPDEMPEF-----EFDAGLPVSNLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +AG   ST+EA R +K  A KI++  +++ K   +       G      GK+      +
Sbjct: 342 EAGLCASTSEAMRMVKQGAAKIDSEKVADSKFAPQA------GKYVFQVGKRKFARITI 394


>gi|313199844|ref|YP_004038502.1| tyrosyl-tRNA synthetase [Methylovorus sp. MP688]
 gi|312439160|gb|ADQ83266.1| tyrosyl-tRNA synthetase [Methylovorus sp. MP688]
          Length = 402

 Score =  396 bits (1019), Expect = e-108,   Method: Composition-based stats.
 Identities = 104/419 (24%), Positives = 181/419 (43%), Gaps = 25/419 (5%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M A   D    L +RG    +     ++ L     +    G+D TA  LH GH   L  L
Sbjct: 1   MRALNEDLA--LIKRGCDELLIEQELVEKLKLGRPLRVKAGFDPTAPDLHLGHTVLLNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             LQ+ GH  + L+G  T +IGDP+ +  +R  + ++++QEN +  +      +K     
Sbjct: 59  RQLQELGHHVLFLIGDFTGMIGDPTGKSATRPPLTAEQVQENAKSYEAQVFKILK----P 114

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               ++ N  W+  +    +L+   +  +V RML  +    R K  Q ++  EF Y +LQ
Sbjct: 115 EQTEVVFNSAWISQLGAAGMLKLAATH-TVARMLERDDFSKRYKNNQPIAIHEFLYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGK 239
            YD VEL  +    L++GG+DQ  N++ G +L +         LT PLL    G  KM K
Sbjct: 174 GYDSVELKAD----LELGGTDQKFNLLMGRELQKHYGQSPQCVLTMPLLEGLDGVNKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINE 297
           +L   I + +      + +    +I D  +  + + L+   M  I    +    G+    
Sbjct: 230 SLGNYIGIAEPAN---DIFSKLMSISDTLMWRYIELLSFESMETIASWKQSVEAGENPRN 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K   A E+ T  H  E AE+A                +P +SI+  +    +G+  L+ 
Sbjct: 287 IKVRFAQELVTRFHSAEAAEQALADF-SLRSKGGIPDDVPEVSIALAQ--DRIGIAALLK 343

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +AG   ST+EA R ++   +K+++  + ++ LQ+          +    GK+      +
Sbjct: 344 QAGLVASTSEALRMIEQGGVKLDSEKVEDKALQLGA-----GVTVVAQVGKRKFARITI 397


>gi|152983821|ref|YP_001346204.1| tyrosyl-tRNA synthetase [Pseudomonas aeruginosa PA7]
 gi|150958979|gb|ABR81004.1| tyrosyl-tRNA synthetase [Pseudomonas aeruginosa PA7]
          Length = 399

 Score =  396 bits (1019), Expect = e-108,   Method: Composition-based stats.
 Identities = 103/409 (25%), Positives = 170/409 (41%), Gaps = 24/409 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG    +     +  L     +    G+D TA  LH GH   +  L   Q  GH+ I
Sbjct: 10  LIQRGADEILVEAELVAKLKRGQPLRIKAGFDPTAPDLHLGHTVLINKLRQFQDLGHQVI 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T +IGDPS +  +R  +   ++ EN E  K      +     +    +  N TW
Sbjct: 70  FLIGDFTGMIGDPSGKSVTRPPLTRDQVLENAETYKSQVFKILDPSRTE----VAFNSTW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +  +   D +R + S ++V RML  +    R    Q ++  EF Y ++Q YD V L  + 
Sbjct: 126 MDQLTPADFIR-LASQYTVARMLERDDFSKRYASNQPIAIHEFLYPLVQGYDSVALKAD- 183

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G +L           LT PLL    G  KM K+L   I + + 
Sbjct: 184 ---VELGGTDQKFNLLMGRELQRAYGQEAQVILTMPLLEGLDGVKKMSKSLGNYIGIQE- 239

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEITT 308
             +P   +    +I D  +  + + L+   M EI+  R     G    + K  +A EI  
Sbjct: 240 --APGVMYSKLVSIPDTLMWRYFELLSFRSMDEIEGFRKDVEAGANPRDIKIKLAEEIVA 297

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
             HG E A  A  +A          + +P I +S  E    M + +++ KAG   +   A
Sbjct: 298 RFHGEEAAASAHKSAGNRLKDGELPEDLPEIELSAAE---DMPVASVLNKAGLVKNAAAA 354

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           R  L +  ++++  ++ +    + L             GKK      L 
Sbjct: 355 RDLLGAGGVRVDGEVV-DRSFVLTL-----GETRVFQAGKKAFARITLT 397


>gi|309807304|ref|ZP_07701273.1| tyrosine--tRNA ligase [Lactobacillus iners LactinV 03V1-b]
 gi|308166286|gb|EFO68496.1| tyrosine--tRNA ligase [Lactobacillus iners LactinV 03V1-b]
          Length = 364

 Score =  396 bits (1019), Expect = e-108,   Method: Composition-based stats.
 Identities = 136/372 (36%), Positives = 189/372 (50%), Gaps = 25/372 (6%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGV-VTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           D L  L  RG I+Q ++ + L     Q   +T Y G D T  SLH GHL   M+L   Q 
Sbjct: 2   DILEDLKWRGAINQQTDEQGLREYLQQHKDLTLYCGTDPTGDSLHIGHLIPFMILKRFQM 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            G+ PI L+GG T  IGDPS R   R +   ++++ N + +            G  +  +
Sbjct: 62  AGYHPIILIGGATGAIGDPSGRKTERVLQSEEQVRRNEKSLTAQMEKLF----GTENFEI 117

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN +WL  +  +D LR+ G  F VN ML+ + V SRL     +S+ EF Y I+QA DF 
Sbjct: 118 VNNASWLSKLTLLDFLRDYGKLFQVNTMLNKDIVASRLA--TGISYTEFTYQIMQAIDFY 175

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSG 243
            L KN +  LQ+GG DQWGNI  GIDL  R++      F LT PL+  + GTK GK+   
Sbjct: 176 YLNKNKNVTLQIGGGDQWGNITGGIDLIHRIEGADHPAFGLTIPLMLKSDGTKFGKSAGV 235

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKI 301
           AIWL+ E TSPY F+Q+W N DD DV+ + K  T L   EI+ +A    KE     A++ 
Sbjct: 236 AIWLDPEKTSPYEFYQFWINQDDRDVIKYLKYFTFLSHQEIEDLAISVEKEPWKRLAQRK 295

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMG 351
           +A E+T  VHG      A       F+ +I            ++ P + ISK        
Sbjct: 296 LAEEVTKFVHGEAGLRDAQFITNALFEGNIKDLSVKQIEQGFKNAPYVEISK----ESKN 351

Query: 352 LLTLIVKAGFAT 363
           L+ L+V+ G   
Sbjct: 352 LVDLLVETGIEK 363


>gi|33241703|ref|NP_876644.1| tyrosyl-tRNA synthetase [Chlamydophila pneumoniae TW-183]
 gi|33236212|gb|AAP98301.1| tyrosyl-tRNA synthetase [Chlamydophila pneumoniae TW-183]
          Length = 422

 Score =  396 bits (1019), Expect = e-108,   Method: Composition-based stats.
 Identities = 140/430 (32%), Positives = 218/430 (50%), Gaps = 33/430 (7%)

Query: 3   AFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
           +    +L  L ER  +   +    L+ +  +G + AY+G+D TA +LH GH   +  L  
Sbjct: 9   SLMQSWLQSLQERNILENFT--AGLESV--EGPIAAYLGFDPTAPALHIGHWIGICFLKR 64

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD 122
           L   G  PI+L+GG T ++GDPS +   R ++++ E+ +N +KI      ++        
Sbjct: 65  LAALGITPIALVGGATGMVGDPSGKQSERSLLQTSEVFDNSQKITACLQRYL------PG 118

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
             ++NN  WL  I  ID LR+IG  F + +ML  ++++ R+  ++ +S+ EF+Y+ILQ+Y
Sbjct: 119 VTLVNNADWLQEISLIDFLRDIGKHFRLGQMLVKDTIKQRVHSDEGISYTEFSYLILQSY 178

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DF  L KNY   LQ GGSDQWGNI  GID   R    + + LT PLLT A G K+GKT S
Sbjct: 179 DFYHLFKNYGTILQCGGSDQWGNITSGIDFIRRKGLGQAYGLTYPLLTNAQGKKIGKTES 238

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKII 302
           G +WL+ ++TSP+  +QY   + D  +   A+ LT L   EI  + +    +    K+ +
Sbjct: 239 GTVWLDSDLTSPFELYQYLLRLPDDTIPKIARTLTLLSNEEIQDIDRRVQTDPVAVKEFV 298

Query: 303 ATEITTMVHGREEAEKA----------------ATAAMECFDMSIHSQHMPTISISKDEV 346
           A +I + +HG    E+A                     E F   + +      S+ K EV
Sbjct: 299 AQDILSAIHGDLGLEEALSVTRSMHPGNLSSLSEKDFHELFAGGMGA------SLDKSEV 352

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
             G   L L +  G   S  E RR ++   + INN  I+NE    + QD      + L+ 
Sbjct: 353 -LGKRWLDLFLVLGLCKSKGEIRRLIEQKGVYINNVPIANEHSVCEEQDICYGHYVLLAQ 411

Query: 407 GKKNHIICHL 416
           GKK  ++ +L
Sbjct: 412 GKKRKLVLYL 421


>gi|170725574|ref|YP_001759600.1| tyrosyl-tRNA synthetase [Shewanella woodyi ATCC 51908]
 gi|169810921|gb|ACA85505.1| tyrosyl-tRNA synthetase [Shewanella woodyi ATCC 51908]
          Length = 398

 Score =  396 bits (1018), Expect = e-108,   Method: Composition-based stats.
 Identities = 102/417 (24%), Positives = 181/417 (43%), Gaps = 25/417 (5%)

Query: 6   SDFLSILSE--RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           +D    L+E  RG    +     L+ L     +   +G D TA  +H GH   L  +   
Sbjct: 2   ADLDQALAEIKRGTDEILLEADLLEKLKEGRPLRIKLGADPTAPDIHLGHTVILNKMRTF 61

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q+ GH+ I L+G  T ++GDPS ++ +R  +  +++  N E  K      +     +   
Sbjct: 62  QELGHEVIFLIGDFTGMVGDPSGKNSTRPPLTREQVLANAETYKQQVYKILDPAKTR--- 118

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            +  N +WL  +    ++R + S  +V RM+  +  + R    QS++  EF Y +LQ YD
Sbjct: 119 -IEFNSSWLEPLGAAGMIR-LASKQTVARMMERDDFKKRYASGQSIAIHEFMYPLLQGYD 176

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLS 242
            V L    +  +++GG+DQ  N++ G +L +         +  PLL    G  KM K+  
Sbjct: 177 SVAL----EADVELGGTDQKFNLLMGRELQKSKGQKPQTVIMMPLLEGLDGVKKMSKSAH 232

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKK 300
             I +++        +    +I D  +  + + L+  P+SEI++  +   QG    + K 
Sbjct: 233 NYIGVSEPAG---EMFGKIMSISDDLMWRYLELLSFRPLSEIEQFKRDVEQGTNPRDIKI 289

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
            +A EI    H    AE A    +  F        +  + I+   V  G+ +  L+ +AG
Sbjct: 290 ALAKEIIARFHDEAAAEGAHQEFINRFQKGAIPDDIEELEIA---VGEGIAIANLLKEAG 346

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
              ST++  R +K  A KI+ + I + +LQ+         +     GK+      L 
Sbjct: 347 LVNSTSDGMRMIKQGAAKIDGAKIDDTRLQLTA-----GTSGVFQVGKRKFAKITLV 398


>gi|33598386|ref|NP_886029.1| tyrosyl-tRNA synthetase [Bordetella parapertussis 12822]
 gi|81426168|sp|Q7W3Z8|SYY_BORPA RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|33574515|emb|CAE39160.1| tyrosyl-tRNA synthetase [Bordetella parapertussis]
          Length = 409

 Score =  396 bits (1018), Expect = e-108,   Method: Composition-based stats.
 Identities = 98/387 (25%), Positives = 175/387 (45%), Gaps = 25/387 (6%)

Query: 35  VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMM 94
            +   +G D TA  +H GH   L  +  LQ  GH  I L+G  TS IGDPS R+ +R  +
Sbjct: 45  PLRIKLGLDPTAPDIHLGHTVVLNKMRQLQDLGHNVIFLIGDFTSTIGDPSGRNSTRPPL 104

Query: 95  RSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRML 154
             ++I+ N +      S  +     +    +  N  W   +    ++ ++ S ++V RM+
Sbjct: 105 TREQIETNAKTYYAQASLVLDPARTE----IRYNSEWCDPLGARGMI-QLASRYTVARMM 159

Query: 155 SFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
             E    R K    ++  EF Y +LQ YD V L  +    L++GG+DQ  N++ G +L +
Sbjct: 160 EREDFTRRFKGGVPIAVHEFLYPLLQGYDSVALKAD----LELGGTDQKFNLLVGRELQK 215

Query: 215 RLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFA 273
                +   LT PLL    G  KM K+    I +++   +P + +    +I D  +  + 
Sbjct: 216 EYGQEQQCILTMPLLVGTDGVEKMSKSKGNYIGISE---APESMFGKLMSISDMLMWRYY 272

Query: 274 KRLTTLPMSEIDRMAKL--QGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSI 331
           + L+   +++I  +      G+   +AK  +A EI    H  + AE A  A    F    
Sbjct: 273 ELLSFRSLADIAALKAEIDGGRNPRDAKVALAQEIVARFHSPQAAEAALAAFEARFRDGA 332

Query: 332 HSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
             + MP +++         G+L ++ +AG   S +EA+R+++   +++N   + ++ LQ+
Sbjct: 333 IPEDMPEVTVG----GAPQGILRILREAGLVASGSEAQRNVEQGGVRVNGDRVEDKSLQL 388

Query: 392 KLQDFDSTGNIKLSFGKKNHIICHLCG 418
                   G   +  GK+      L G
Sbjct: 389 SA------GTYVVQVGKRKFARVKLVG 409


>gi|50365404|ref|YP_053829.1| tyrosyl-tRNA synthetase [Mesoplasma florum L1]
 gi|81391721|sp|Q6F0M8|SYY_MESFL RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|50363960|gb|AAT75945.1| tyrosyl-tRNA synthetase [Mesoplasma florum L1]
          Length = 413

 Score =  396 bits (1018), Expect = e-108,   Method: Composition-based stats.
 Identities = 136/397 (34%), Positives = 205/397 (51%), Gaps = 19/397 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG + QI+N   L    + G    Y G+D TA SLH GHL  ++ L    K 
Sbjct: 2   NIIKELEWRGLVKQITNEERLLKAQNDG-AAVYCGFDPTADSLHVGHLMMIVTLKRFDKA 60

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           G + I L+GGGT +IGDPSF+ + R++   ++++ +   I+      I       D    
Sbjct: 61  GFQAIGLIGGGTGMIGDPSFKADERKLQTDEQVKFHATAIQNQLLRII------PDVTFA 114

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL ++  ID LR++G  F+++ +L+ +S+ +R+     LS  EF+Y +LQAYDF  
Sbjct: 115 NNVDWLGNMSLIDFLRDVGKDFNISYLLNKDSIATRIS--TGLSVTEFSYTMLQAYDFYN 172

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERL---KTPKLFALTSPLLTTASGTKMGKTLSG 243
           L  N++C++Q+GGSDQWGNI  G D           +    T PLLT + G K GKT SG
Sbjct: 173 LYINHNCKVQIGGSDQWGNITSGTDYISTRVGSANTEAAGFTIPLLTKSDGQKFGKTESG 232

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKKI 301
           A+WL+   TS Y+F+Q+W N DD D V   K LT L   EID +         +   +K 
Sbjct: 233 AVWLDSNKTSVYDFYQFWINQDDNDCVKMLKYLTFLTKEEIDELEAKHKEAPHLRTMQKT 292

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI-----SISKDEVSRGMGLLTLI 356
           +A+EIT  VHG +E  KA       F  +I +     +     SI   ++ +    +  I
Sbjct: 293 LASEITKFVHGDKELNKAIKLTDAFFTGNILNLDDDLLELAIKSIPTIQLEKTTSAIDAI 352

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL 393
           V    A+S  EAR  + + AI  N+  + +E + +  
Sbjct: 353 VNVNAASSKREAREFINAKAISFNDVAVQDENMLLSE 389


>gi|78065245|ref|YP_368014.1| tyrosyl-tRNA synthetase [Burkholderia sp. 383]
 gi|115305798|sp|Q39JJ6|SYY_BURS3 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|77965990|gb|ABB07370.1| tyrosyl-tRNA synthetase [Burkholderia sp. 383]
          Length = 413

 Score =  396 bits (1017), Expect = e-108,   Method: Composition-based stats.
 Identities = 98/416 (23%), Positives = 188/416 (45%), Gaps = 31/416 (7%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           K     +L E  F  +++         +   +   +G D TA  +H GH   L  +  LQ
Sbjct: 25  KRGVDELLVEEEFAQKLA-----RSAATGTPLRIKLGLDPTAPDIHIGHTVVLNKMRQLQ 79

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GH  I L+G  TS+IGDPS R+ +R  +  ++I+ N +      +  +     +    
Sbjct: 80  DLGHTVIFLIGDFTSLIGDPSGRNATRPPLTREQIESNAKTYFEQAALVLDRDKTE---- 135

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           +  N  W   +    +++ + S ++V R+L  E    R +    +S  EF Y ++Q YD 
Sbjct: 136 IRYNSEWSMPLGADGMIK-LASRYTVARILEREDFTKRFQGGVPISIHEFLYPLMQGYDS 194

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSG 243
           V L  +    L++GG+DQ  N++ G +L ++    +   LT PLL    G  KM K+   
Sbjct: 195 VALNAD----LELGGTDQKFNLLVGRELQKQYGQEQQCILTMPLLEGLDGVEKMSKSKGN 250

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKI 301
            + +++    P + +    +I D  +  + + L+  PM EI   +     G+   + K +
Sbjct: 251 YVGISE---QPTDMFGKLMSISDTLMWRYFELLSFRPMDEIGGFKREIEGGRNPRDFKVL 307

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGF 361
           +A EI    H + +AE+A                +P+++++       + +  L+ +AG 
Sbjct: 308 LAQEIVARFHSQADAERALEDF-NHRAKGGVPDDIPSVTLA----GAPLAIGQLLKQAGL 362

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
             ST+EA R+++   +KI+ + +S++ L+++  +F       +  GK+      L 
Sbjct: 363 VPSTSEALRNIEQGGVKIDGATVSDKGLKVEAGEF------VVQVGKRRFARVTLT 412


>gi|16752679|ref|NP_444946.1| tyrosyl-tRNA synthetase [Chlamydophila pneumoniae AR39]
 gi|14195230|sp|Q9Z8I2|SYY_CHLPN RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|7189321|gb|AAF38242.1| tyrosyl-tRNA synthetase [Chlamydophila pneumoniae AR39]
          Length = 412

 Score =  396 bits (1017), Expect = e-108,   Method: Composition-based stats.
 Identities = 140/425 (32%), Positives = 217/425 (51%), Gaps = 33/425 (7%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           +L  L ER  +   +    L+ +  +G + AY+G+D TA +LH GH   +  L  L   G
Sbjct: 4   WLQSLQERNILENFT--AGLESV--EGPIAAYLGFDPTAPALHIGHWIGICFLKRLAALG 59

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
             PI+L+GG T ++GDPS +   R ++++ E+ +N +KI      ++          ++N
Sbjct: 60  ITPIALVGGATGMVGDPSGKQSERSLLQTSEVFDNSQKITACLQRYL------PGVTLVN 113

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  I  ID LR+IG  F + +ML  ++++ R+  ++ +S+ EF+Y+ILQ+YDF  L
Sbjct: 114 NADWLQEISLIDFLRDIGKHFRLGQMLVKDTIKQRVHSDEGISYTEFSYLILQSYDFYHL 173

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            KNY   LQ GGSDQWGNI  GID   R    + + LT PLLT A G K+GKT SG +WL
Sbjct: 174 FKNYGTILQCGGSDQWGNITSGIDFIRRKGLGQAYGLTYPLLTNAQGKKIGKTESGTVWL 233

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           + ++TSP+  +QY   + D  +   A+ LT L   EI  + +    +    K+ +A +I 
Sbjct: 234 DSDLTSPFELYQYLLRLPDDTIPKIARTLTLLSNEEIQDIDRRVQTDPVAVKEFVAQDIL 293

Query: 308 TMVHGREEAEKA----------------ATAAMECFDMSIHSQHMPTISISKDEVSRGMG 351
           + +HG    E+A                     E F   + +      S+ K EV  G  
Sbjct: 294 SAIHGDLGLEEALSVTRSMHPGNLSSLSEKDFHELFAGGMGA------SLDKSEV-LGKR 346

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
            L L +  G   S  E RR ++   + INN  I+NE    + QD      + L+ GKK  
Sbjct: 347 WLDLFLVLGLCKSKGEIRRLIEQKGVYINNVPIANEHSVCEEQDICYGHYVLLAQGKKRK 406

Query: 412 IICHL 416
           ++ +L
Sbjct: 407 LVLYL 411


>gi|300309748|ref|YP_003773840.1| tyrosyl-tRNA synthetase [Herbaspirillum seropedicae SmR1]
 gi|300072533|gb|ADJ61932.1| tyrosyl-tRNA synthetase protein [Herbaspirillum seropedicae SmR1]
          Length = 453

 Score =  396 bits (1017), Expect = e-108,   Method: Composition-based stats.
 Identities = 102/416 (24%), Positives = 182/416 (43%), Gaps = 31/416 (7%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           K     +L E  F  +++   +     S   +   +G D TA  LH GH   L  +  LQ
Sbjct: 66  KRGIDELLIESEFAQKLARAEQ-----SGQPLRIKLGLDPTAPDLHLGHTVVLNKMRQLQ 120

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GH+ I L+G  TS+IGDPS R+ +R  +  ++I+ N +      S  +     +    
Sbjct: 121 NLGHQVIFLIGDFTSMIGDPSGRNATRPPLSREQIEINAKTYFAQASLVLDPSKTE---- 176

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           +  N  W  ++    ++ ++ S ++V RM+  +    R K    +S  EF Y ++Q YD 
Sbjct: 177 IRYNSEWCDALGSRGMI-QLASRYTVARMMERDDFTKRFKEGTPISVHEFLYPLMQGYDS 235

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSG 243
           V L  +    L++GG+DQ  N++ G +L +         LT PLL    G  KM K+   
Sbjct: 236 VALKSD----LELGGTDQKFNLLVGRELQKDFGQEPQCILTMPLLEGLDGVEKMSKSKGN 291

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKI 301
            I + +   +    +    +I D  +  +   L+   M+EI         GK   + K  
Sbjct: 292 YIGITEPANT---MFAKVMSISDVMMWRYYDLLSFRSMAEIAGYKAEVDAGKNPRDIKVA 348

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGF 361
           +A EI    H ++ AE A    +           +P +S++       +G+  L+ +A  
Sbjct: 349 LAQEIVARFHSQQAAEDALADFVNR-SKGGIPDDIPEVSLT----GAPLGIGQLLKQANL 403

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
             ST+EA R ++   ++I+ ++IS++ L+++       G   +  GK+      L 
Sbjct: 404 CASTSEALRMVEQGGVRIDGTVISDKGLKVEA------GQCVVQVGKRKFARVTLA 453


>gi|260910551|ref|ZP_05917218.1| tyrosine-tRNA ligase [Prevotella sp. oral taxon 472 str. F0295]
 gi|260635322|gb|EEX53345.1| tyrosine-tRNA ligase [Prevotella sp. oral taxon 472 str. F0295]
          Length = 364

 Score =  396 bits (1017), Expect = e-108,   Method: Composition-based stats.
 Identities = 136/355 (38%), Positives = 197/355 (55%), Gaps = 9/355 (2%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
            K +F+  L  RG + QI    E   L  +  VTAY+G D TA SLH GHL  +M+L  L
Sbjct: 1   MKKNFVEELRWRGMLAQIMPGTE--ELLQKETVTAYLGTDPTADSLHIGHLAGIMMLRHL 58

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG-TGKTD 122
           Q  GHKPI L+GG T +IGDPS +   R ++ +Q +  N E IK   + F+ +   G   
Sbjct: 59  QMCGHKPIILVGGATGMIGDPSGKSMERNLLDAQTLYHNQECIKAQVAKFLDFEAKGDNA 118

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQ 180
           A M+NN  W+    ++D  R +G   +VN M++ +SV+ RL  +    LSF EF Y +LQ
Sbjct: 119 AEMVNNYDWMKDFTFLDFARTVGKHITVNYMMAKDSVKKRLNGDARDGLSFTEFTYQLLQ 178

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKLFALTSPLLTTASGTKMG 238
            YDF+ L +   C+LQ+GG+DQWGN+  G +L  R      + +ALT PL+T A GTK G
Sbjct: 179 GYDFLHLYETKGCKLQLGGNDQWGNMTTGAELIRRTLGVETEAYALTCPLITKADGTKFG 238

Query: 239 KTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--N 296
           KT SG IWL+ + TSPY F+Q+W N+ DAD   + K  T+L    ID +   Q ++    
Sbjct: 239 KTESGNIWLDAKRTSPYMFYQFWLNVSDADAERYIKIFTSLDKETIDALVAEQNEDPGRR 298

Query: 297 EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMG 351
             +K +A E+T MVH +   ++A  A+   F  +     +     +  +V  G+ 
Sbjct: 299 PLQKRLAEEVTVMVHSQAALDQAMEASNILFGKATKESLLKLDEQTLLDVFEGVP 353


>gi|147677355|ref|YP_001211570.1| tyrosyl-tRNA synthetase [Pelotomaculum thermopropionicum SI]
 gi|146273452|dbj|BAF59201.1| tyrosyl-tRNA synthetase [Pelotomaculum thermopropionicum SI]
          Length = 407

 Score =  396 bits (1017), Expect = e-108,   Method: Composition-based stats.
 Identities = 103/413 (24%), Positives = 179/413 (43%), Gaps = 26/413 (6%)

Query: 11  ILSERGFIHQISNPRELDILCSQ----GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
            + +RG +  I      D L         +T  +G D TA  +H GH   L  L   Q  
Sbjct: 9   EIIKRGTVEIIPESELADKLRRSVETGRPLTVKLGLDPTAPDIHLGHTVVLQKLKQFQDL 68

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+ + ++G  T+ IGDP+ + E+RR +  +++  N    +      +     K    ++
Sbjct: 69  GHQVVLILGDFTARIGDPTGKTETRRQLTEEQVLANARTYERQIFKILDRDKTK----VV 124

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
            N  WL  + +  ++ E+ S ++V RML  +    R K    +S  EF Y ++Q YD V 
Sbjct: 125 FNSQWLAPLTFAQVI-ELASKYTVARMLERDDFARRFKECLPISIHEFFYPLMQGYDSVA 183

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAI 245
           L  +    L++GG+DQ  N++ G  L +        A+  P+L    G  KM K+L   I
Sbjct: 184 LKAD----LEIGGTDQKFNLLMGRTLQKEYGQEPQVAVMMPILEGLDGVNKMSKSLGNYI 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSE---IDRMAKLQGKEINEAKKII 302
            +N+    P   +    ++ D  ++ + + +T + + E   I+   K       +AK  +
Sbjct: 240 GINE---PPREMYGKTMSLPDELMIRYFELVTAISLEELKTIEAGLKSGEMHPRDAKMRL 296

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGF 361
           A EI T  HG E A  A       F        +P   ++   +  G + L  L+  AG 
Sbjct: 297 AREIVTQYHGPEAARAAEEEFKRVFQQKDLPDELPGFKVTAGMLEDGAIWLPRLMAMAGL 356

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           A ST+EARR ++   +KI+   + +    +K        ++ +  GK+     
Sbjct: 357 AGSTSEARRLIQQGGVKIDGRKVEDPNYSLKA-----GSDMVIQVGKRRFARI 404


>gi|238026240|ref|YP_002910471.1| tyrosyl-tRNA synthetase [Burkholderia glumae BGR1]
 gi|237875434|gb|ACR27767.1| Tyrosyl-tRNA synthetase [Burkholderia glumae BGR1]
          Length = 413

 Score =  396 bits (1017), Expect = e-108,   Method: Composition-based stats.
 Identities = 97/412 (23%), Positives = 185/412 (44%), Gaps = 30/412 (7%)

Query: 12  LSERG----FIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           +++RG     I      +      +   +   +G D TA  +H GH   L  +  LQ  G
Sbjct: 23  ITKRGVDELLIEDEFAQKLARSEATGTPLRIKLGLDPTAPDIHIGHTVVLNKMRQLQDLG 82

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H  I L+G  TS+IGDPS R+ +R  +  ++I+ N +      +  +     +    +  
Sbjct: 83  HTVIFLIGDFTSLIGDPSGRNATRPPLTREQIEANAKTYFEQAALVLDRDKTE----IRY 138

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W   +    +++ + S ++V R+L  E    R +    +S  EF Y ++Q YD V L
Sbjct: 139 NSEWSMPLGADGMIK-LASRYTVARILEREDFTKRFQGGVPISIHEFLYPLMQGYDSVAL 197

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIW 246
             +    L++GG+DQ  N++ G +L ++        LT PLL    G  KM K+    + 
Sbjct: 198 NAD----LELGGTDQKFNLLVGRELQKQYGQEPQCILTMPLLEGLDGVEKMSKSKGNYVG 253

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIAT 304
           ++++   P   +    +I D  +  + + L+  PM EI++       G+   + K ++A 
Sbjct: 254 ISEK---PAEMFGKLMSISDVLMWRYFELLSFRPMREIEKFKAEIEAGRNPRDFKVLLAQ 310

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           EI    H + +AE+A                +P++S+        + +  L+ +AG   S
Sbjct: 311 EIVARFHSQADAEQALEDF-NHRARGGVPDDIPSVSLG----GAPLAIGQLLKQAGLVPS 365

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           T+EA R+++   +KI+ + +S++ L+++       G   +  GK+      +
Sbjct: 366 TSEALRNIEQGGVKIDGTTVSDKGLKVEA------GEYVVQVGKRRFARVTV 411


>gi|330444439|ref|YP_004377425.1| tyrosyl-tRNA synthetase [Chlamydophila pecorum E58]
 gi|328807549|gb|AEB41722.1| tyrosyl-tRNA synthetase [Chlamydophila pecorum E58]
          Length = 412

 Score =  396 bits (1017), Expect = e-108,   Method: Composition-based stats.
 Identities = 146/425 (34%), Positives = 224/425 (52%), Gaps = 33/425 (7%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           F+  L +RG +   S    LD +  +  V+AY+G+D TA+SLH GH   +  L  L + G
Sbjct: 4   FVLSLKDRGILENFS--AGLDSI--EKPVSAYLGFDPTAASLHIGHWIGICFLKRLAQYG 59

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
             PI+L+GG T ++GDPS ++  R ++ ++E+ EN +KI    +  +          +LN
Sbjct: 60  MTPIALVGGATGMVGDPSGKNAERSLLSAKEVSENSQKITKSLAKHL------PGVTILN 113

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W+     ID LR++G  F + +ML+ + V+ RL  E+ LS+ EF+YM+LQAYDF  L
Sbjct: 114 NIDWVQHFSVIDFLRDVGKHFRLGQMLTKDVVKQRLDSEEGLSYTEFSYMLLQAYDFYYL 173

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
            KNY   LQ GGSDQWGNI  GI+   R    +   LT PLLT + G K+GKT SG IWL
Sbjct: 174 FKNYGVVLQCGGSDQWGNITLGIEFIRRHNLGQAHGLTYPLLTDSQGKKIGKTESGTIWL 233

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           + E+TSPY  +QY+  + D+DV+  A+ LT L   EI  + +    +    K+ +A  I 
Sbjct: 234 DPELTSPYELYQYFLRLPDSDVLVVARTLTMLSNEEIFALDQQFLSDPIGVKRTVAENIV 293

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSR------GMGL--------- 352
             +HG +   +A          SIH   +  IS+S+           G+ +         
Sbjct: 294 HAIHGEQGLSEAQRVTE-----SIHPGAL--ISLSEQNFQELVANGFGIKIKKSAVLGKR 346

Query: 353 -LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
            + L V  GF  S  EARR ++   + +NN  I + +  ++      +  + L+ GKK  
Sbjct: 347 WIDLCVSVGFCNSKGEARRLIEQKGLYVNNFTIRDNQSTLEESQICFSHYVLLAQGKKRK 406

Query: 412 IICHL 416
           ++ +L
Sbjct: 407 LVLYL 411


>gi|307825818|ref|ZP_07656034.1| tyrosyl-tRNA synthetase [Methylobacter tundripaludum SV96]
 gi|307733126|gb|EFO03987.1| tyrosyl-tRNA synthetase [Methylobacter tundripaludum SV96]
          Length = 398

 Score =  396 bits (1017), Expect = e-108,   Method: Composition-based stats.
 Identities = 104/421 (24%), Positives = 180/421 (42%), Gaps = 31/421 (7%)

Query: 4   FKSDFLSILSERG----FIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLML 59
            + D L+ L  RG     I Q      +  L     +    G+D TA  LH GH   +  
Sbjct: 1   MQEDVLAHLL-RGTDEVLIKQ----ELIKKLEEGRPLRIKAGFDPTAPDLHLGHTVLINK 55

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG 119
           L   Q+ GH+ + L+G  T +IGDP+ ++ +R+ +   E+ +N    +      +     
Sbjct: 56  LKQFQELGHEVLFLIGDFTGMIGDPTGKNVTRKPLTRDEVIDNARTYEEQIFKILDPAKT 115

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
               L++ N +W+ ++   DL++      +V RML  +    R K  Q ++  EF Y ++
Sbjct: 116 ----LVMFNSSWMNAMSPADLIQLAAKH-TVARMLERDDFSKRFKGGQPIAIHEFLYPLI 170

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMG 238
           Q YD V +  +    +++GG+DQ  N++ G  L E         +T P+L    G  KM 
Sbjct: 171 QGYDSVAMKAD----VELGGTDQKFNLLVGRQLQEAFGQKPQVVMTMPILEGLDGVQKMS 226

Query: 239 KTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEIN 296
           K+L+  + +        + +    +I D  +  + + L+  PM+EI   A+   QG    
Sbjct: 227 KSLNNYVGIADSAD---DMFGKLMSISDELMWRYFELLSFRPMTEIGLWAEECKQGANPR 283

Query: 297 EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLI 356
           + K  +A EI    H    A KA       F        M  + +  +  S G  +  ++
Sbjct: 284 DYKVKLAQEIIERFHDAAAAVKALENFEARFQRGAMPDEMDELELKIEGTSYG--IANIL 341

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
              G   ST+EA R +K  A+KI+   +S++KL+I         N     GK+      +
Sbjct: 342 KDTGLTESTSEANRMIKQGAVKIDGEKVSDQKLEISA-----GTNHVYQVGKRKFARVKI 396

Query: 417 C 417
            
Sbjct: 397 T 397


>gi|301156148|emb|CBW15619.1| unnamed protein product [Haemophilus parainfluenzae T3T1]
          Length = 395

 Score =  396 bits (1017), Expect = e-108,   Method: Composition-based stats.
 Identities = 108/420 (25%), Positives = 177/420 (42%), Gaps = 28/420 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M    +  L+ L  RG    +S    ++ L     +   +G D TA  +H GH   L  L
Sbjct: 1   MTDINT-VLAELK-RGTDEILSEADLIEKLKENRPLKIKLGADPTAPDIHLGHTVVLNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+   L+G  T ++GDPS ++ +R  +  +++  N E  K      +     K
Sbjct: 59  RQFQQLGHEVYFLIGDFTGMVGDPSGKNTTRPPLSREDVLRNAETYKEQIYKILDPQKTK 118

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               ++ N  WL  +    ++R + S ++V RML  +  + R    Q ++  EF Y +LQ
Sbjct: 119 ----IVFNSEWLGKLGTEGMIR-LASNYTVARMLERDDFKKRFGNNQPIAIHEFIYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGK 239
            YD V L    +  +++GG+DQ  N++ G +L +        A+T PLL    G  KM K
Sbjct: 174 GYDSVAL----EADVELGGTDQKFNLLVGRELQKSAGQKPQVAITLPLLVGLDGEKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINE 297
           +L   I +     +P + +    +I D  +  +   L+  P++EI         GK   +
Sbjct: 230 SLGNYIGVT---DAPSDMFGKIMSISDELMWDWYNLLSFRPLTEIAELKAEVANGKNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A EI    H    AE A    +  F        MP  +         +GL TL+ 
Sbjct: 287 VKILLAKEIIARFHDEAAAEAAEQEFINRFQKGAMPDEMPEFT-----FEGEIGLATLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           +AG   ST+EA R  K   +KIN   + + K           G      GK+      + 
Sbjct: 342 EAGLVPSTSEAIRSAKQGGVKINGEKVEDMKAN------APKGTNVYQVGKRKFARVTIA 395


>gi|88813746|ref|ZP_01128966.1| tyrosyl-tRNA synthetase [Nitrococcus mobilis Nb-231]
 gi|88788999|gb|EAR20146.1| tyrosyl-tRNA synthetase [Nitrococcus mobilis Nb-231]
          Length = 427

 Score =  396 bits (1017), Expect = e-108,   Method: Composition-based stats.
 Identities = 102/405 (25%), Positives = 183/405 (45%), Gaps = 22/405 (5%)

Query: 15  RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLM 74
           RG +  +        L     +    G+D TA  LH GH   +  L   Q  GH+ + L+
Sbjct: 34  RGAVDILPTGELEARLTLGRPLRVKAGFDPTAPDLHLGHTVLIHKLRQFQDLGHEVLFLI 93

Query: 75  GGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCS 134
           G  T +IGDPS +  +R+++   E+  N    +      ++ G  +    ++ N +W+ S
Sbjct: 94  GDFTGMIGDPSGKSATRKVLTRDEVLSNARTYEEQIFKILQPGRTQ----VVFNSSWMDS 149

Query: 135 IKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCR 194
           +   D++ ++ + ++V RML  +  R R    Q+++  EF Y ++Q YD V L  +    
Sbjct: 150 LSAADMI-QLAAQYTVARMLERDDFRQRYLTNQAIAIHEFLYPLVQGYDSVALKAD---- 204

Query: 195 LQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTS 253
           +++GG+DQ  N++ G +L +         +T P+L    G  KM K+L   + + +   +
Sbjct: 205 IELGGTDQKFNLLVGRELQKAYGQRPQVIMTLPILEGLDGIQKMSKSLGNYVGIRE---A 261

Query: 254 PYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKIIATEITTMVH 311
           P   +    +I D  +  + + L+     EI+R   A  QG    + K ++A EI    H
Sbjct: 262 PDEIFGKLMSISDELMWRYMELLSFRSPREIERLGEAVRQGGNPRDVKYLLAEEIVERFH 321

Query: 312 GREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRH 371
           GR  A +A    +  F      Q +P + ++      GM +  L+ +AG  +ST+EA R 
Sbjct: 322 GRHAATRAREEFIARFQRGATPQELPEVMVAAP--GDGMLIGNLLKEAGLVSSTSEAMRL 379

Query: 372 LKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +K  A++I++  I N  L I               GK+      +
Sbjct: 380 MKQRAVRIDDECIENRALCIAP-----GSVHVYKVGKRRVARIKV 419


>gi|300113478|ref|YP_003760053.1| tyrosyl-tRNA synthetase [Nitrosococcus watsonii C-113]
 gi|299539415|gb|ADJ27732.1| tyrosyl-tRNA synthetase [Nitrosococcus watsonii C-113]
          Length = 406

 Score =  395 bits (1016), Expect = e-108,   Method: Composition-based stats.
 Identities = 108/412 (26%), Positives = 186/412 (45%), Gaps = 23/412 (5%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  +  RG    +        L    ++    G+D TA  LH GH   L  L   Q+ G
Sbjct: 7   ILDEIR-RGTEEVLLEEELKLRLEQGRILRVKAGFDPTAPELHLGHTVLLNKLRQFQELG 65

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+ + L+G  T +IGDPS ++ +R+ +   +I EN    +      +          ++ 
Sbjct: 66  HEVLFLIGDFTGMIGDPSGKNVTRQPLTRDKILENARTYEEQIFRVLD----PEKTQVVF 121

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N +W+  +   DL+R + S ++V RML  +    R + ++ ++  EF Y +LQ YD V L
Sbjct: 122 NSSWMSGMTAADLVR-LSSHYTVARMLERDDFYKRYQGKRPIAIHEFLYPLLQGYDSVAL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIW 246
             +    +++GG+DQ  N++ G DL +     +   +T P+L    G  KM K+L   I 
Sbjct: 181 KAD----VELGGTDQKFNLLVGRDLQKVYGQDQQIIITMPILEGLDGVQKMSKSLGNYIG 236

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIAT 304
           +++    P   +    +I D  +  + + L++ PMSEI R  K   QG    + K  +A 
Sbjct: 237 ISEP---PREIFGKLMSISDDLMWRYLELLSSRPMSEISRWKKEVEQGANPRDIKVKLAK 293

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           EI    H    AE+A  A +  F   +  + +P I I       G+ +  L+ ++   TS
Sbjct: 294 EIVARFHDDSMAEQAHEAFVAQFRRGVMPEDIPEIPIVAGR--EGIAIARLLKESALTTS 351

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           T+EA R +K  A++I+   + N+ L I            +  GK+      +
Sbjct: 352 TSEALRLIKQGAVRIDGQRLGNQSLHI-----LPGITHVVQVGKRRFARVSV 398


>gi|147901502|ref|NP_001091557.1| tyrosyl-tRNA synthetase, mitochondrial [Bos taurus]
 gi|146186980|gb|AAI40542.1| YARS2 protein [Bos taurus]
 gi|296487352|gb|DAA29465.1| tyrosyl-tRNA synthetase, mitochondrial [Bos taurus]
          Length = 478

 Score =  395 bits (1016), Expect = e-108,   Method: Composition-based stats.
 Identities = 133/438 (30%), Positives = 209/438 (47%), Gaps = 29/438 (6%)

Query: 7   DFLSILSERGFIHQISNPR----ELDILCSQG-----VVTAYIGYDLTASSLHAGHLTQL 57
             L++   RG   +    +    EL  L  +G       T Y G+D TA SLH GHL  L
Sbjct: 37  GLLAVQKARGLFKEFFPEKGTKTELPELFDRGTGGKFPQTIYCGFDPTADSLHVGHLLAL 96

Query: 58  MLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIF------- 110
           + LF  Q+ GH  I+L+GG T+ +GDPS R + R  + ++ +Q N   +           
Sbjct: 97  LGLFHFQRAGHNVIALVGGATARLGDPSGRTKEREALDAERVQSNARALSQGLKALAANH 156

Query: 111 SSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLS 170
                 G       +L+N  W      ++ L  +G  F +  +LS  SV++RLK  + +S
Sbjct: 157 QQLFANGRTWGSFTVLDNSAWYQKQDLVNFLAAVGGHFRMGTLLSRLSVQTRLKSSEGMS 216

Query: 171 FLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLT 230
             EF Y +LQAYDF  L ++Y CR+Q+GGSDQ GNI+ G +   +L    +F ++ PL+T
Sbjct: 217 LAEFLYQVLQAYDFYYLFQHYGCRVQLGGSDQLGNIMSGYEFIHKLTGEDVFGISVPLIT 276

Query: 231 TASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL 290
           + +G K+GK+   A+WLN++ TSP+  +Q++    D  V  + K  T LP+ EID + +L
Sbjct: 277 STTGAKLGKSAGNAVWLNRDKTSPFELYQFFLRQQDDLVERYLKLFTFLPLPEIDHIMQL 336

Query: 291 QGKEI--NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM----------PT 338
             KE      +K +A E+T +VHG+E    A       +  SI +  +            
Sbjct: 337 HVKEPEKRGPQKRLAAEVTKLVHGQEGLASAKRCTQALYHSSIDALEVMSDQELKELFKE 396

Query: 339 ISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL-QDFD 397
            S S+  +  G  +L    KA          R +    + IN+  ++N +  + + Q   
Sbjct: 397 ASFSELVLDPGTSVLDTCRKANAIPDGPRGYRMITEGGVSINHRQVTNPESVLVVGQHIL 456

Query: 398 STGNIKLSFGKKNHIICH 415
             G   L  GK+N  I  
Sbjct: 457 KNGLSLLKIGKRNFYIIK 474


>gi|94986467|ref|YP_594400.1| tyrosyl-tRNA synthetase [Lawsonia intracellularis PHE/MN1-00]
 gi|94730716|emb|CAJ54078.1| Tyrosyl-tRNA synthetase [Lawsonia intracellularis PHE/MN1-00]
          Length = 398

 Score =  395 bits (1016), Expect = e-108,   Method: Composition-based stats.
 Identities = 98/410 (23%), Positives = 182/410 (44%), Gaps = 25/410 (6%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            L +RG++  I+       L ++  +    G+D TA  LH GH   +  L   Q+ GH  
Sbjct: 9   QLIKRGYVELINEESLRKKLSNEKPLVVKAGFDPTAPDLHLGHTVLIHKLRHFQQLGHNV 68

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
             L+G  T +IGDPS R  +R  +  +++Q N E  K      +          ++ N  
Sbjct: 69  TFLIGDFTGLIGDPSGRSTTRPALTVEQVQANAETYKKQIFKILDPLKTN----VVFNSK 124

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           WL S+  +D +R + S +++ RML  +   +R K    ++  E  Y ++Q YD V L  +
Sbjct: 125 WLMSMSSVDFIR-LASHYTLARMLERDDFSNRYKENTPIALHELLYPLMQGYDSVALKSD 183

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNK 249
               +++GG+DQ  N++ G  L           LT PLL    G  KM K+    + +++
Sbjct: 184 ----IELGGTDQKFNLLVGRTLMSHYNIEPQCILTMPLLEGLDGVRKMSKSYGNYVGIDE 239

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAKKIIATEI 306
               PY  +    +I D  +  + + ++T  +SE++++ +   +      + K+ +A +I
Sbjct: 240 ---QPYVQFSKVMSISDELMWRYYELISTSSLSEVEKLKQNVKEGHLHPKKVKEQLAVDI 296

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
            T  HG+E+A +A       F         P    +  E S+       +  +   TS +
Sbjct: 297 VTQYHGKEKAYEALQEFTAVFVNGALPDDTPEFICNYGETSKPPAF---LTDSKLCTSRS 353

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           EA+R +K  ++ +N+    + +L ++  D        +  GKK  +   +
Sbjct: 354 EAKRLIKQGSLTVNDKRYHDVELPLEPGD------YIIKLGKKRFLRLQV 397


>gi|169831527|ref|YP_001717509.1| tyrosyl-tRNA synthetase [Candidatus Desulforudis audaxviator
           MP104C]
 gi|169638371|gb|ACA59877.1| tyrosyl-tRNA synthetase [Candidatus Desulforudis audaxviator
           MP104C]
          Length = 432

 Score =  395 bits (1016), Expect = e-108,   Method: Composition-based stats.
 Identities = 95/414 (22%), Positives = 174/414 (42%), Gaps = 29/414 (7%)

Query: 11  ILSERGFIHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
            +  RG +  I    EL     +       +   +G D TA  +H GH   L  L   Q 
Sbjct: 37  EIIRRGAVE-IIPEDELKEKLRRSLATGRPLQVKLGLDPTAPDIHLGHTVVLHKLRHFQD 95

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+   ++G  T+ +GDPS + E+R+ +  +E+  N    +      +          +
Sbjct: 96  LGHQVTLVLGDYTARVGDPSGKTETRKPLTGEEVMANARTYEAQVFKILD----PNRTRV 151

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
             N  WL  + +  +L E+ S ++V RML  +    R      +S  EF Y ++Q YD V
Sbjct: 152 RFNSEWLAPLDFAAVL-ELASKYTVARMLERDDFAKRFHGGLPISIHEFFYPLMQGYDSV 210

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGA 244
            L  +    +++GG+DQ  N++ G  L +        ALT+PLL    G  KM K+L   
Sbjct: 211 ALKAD----VELGGTDQKFNLLMGRTLQKEYGQEPQVALTTPLLEGLDGVHKMSKSLGNY 266

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKI 301
           I + +    P   +    ++ D  +V + + +T + + E+  +    +       + K  
Sbjct: 267 IGITEP---PEEMYGKLMSLSDDLMVRYFELVTPVSLEELRALKTGLETGTVHPRDLKMR 323

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAG 360
           +A  +    HG++ A  A     + F        +P   +    ++ G + L  L+V AG
Sbjct: 324 LARTVVETYHGKKAAAVAEDEFRKVFQQRELPTDIPDFPVPAGALTGGRIWLPKLLVLAG 383

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
             +ST+EARR +   A+K++   + +E       +      + +  G++     
Sbjct: 384 LCSSTSEARRLIGQGAVKVDEQRVVDEN------EITPRTGMIIRVGRRKFTRL 431


>gi|16273500|ref|NP_439752.1| tyrosyl-tRNA synthetase [Haemophilus influenzae Rd KW20]
 gi|1174554|sp|P43836|SYY_HAEIN RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|1574452|gb|AAC23254.1| tyrosyl tRNA synthetase (tyrS) [Haemophilus influenzae Rd KW20]
          Length = 401

 Score =  395 bits (1016), Expect = e-108,   Method: Composition-based stats.
 Identities = 111/419 (26%), Positives = 182/419 (43%), Gaps = 28/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M    +  L+ L  RG    +S    ++ L     +   +G D TA  +H GH   L  L
Sbjct: 1   MTDINT-VLAELK-RGTDEILSEADLIEKLKENRPLKVKLGADPTAPDIHLGHTVVLNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+   L+G  T ++GDPS ++ +R  +  +++  N E  K      +     K
Sbjct: 59  RQFQQLGHEVYFLIGDFTGMVGDPSGKNATRPPLSREDVLRNAETYKEQIYKILDPQKTK 118

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               ++ N  WL  +    ++R + S ++V RML  +  + R    Q ++  EF Y +LQ
Sbjct: 119 ----IVFNSEWLSKLGTXGMIR-LASNYTVARMLERDDFKKRFGNNQPIAIHEFIYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGK 239
            YD V L  +    +++GG+DQ  N++ G +L +        A+T PLL    G  KM K
Sbjct: 174 GYDSVALDAD----VELGGTDQKFNLLVGRELQKSAGKKPQVAITLPLLVGLDGEKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINE 297
           +L   I + +   +P + +    +I D  +  +   L+  P++EI   +     GK   +
Sbjct: 230 SLGNYIGVTE---APSDMFGKVMSISDELMWDWYNLLSFRPLNEIAQLKSEVENGKNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A E+    H  E A  A    +  F        MP  + S +     MGL TL+ 
Sbjct: 287 VKILLAKELIARFHNEEAANAAEQEFINRFQKGAMPDEMPEFTFSGE-----MGLATLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +AG   ST+EA R  +   +KIN   + N K      D    G      GK+      L
Sbjct: 342 EAGLVPSTSEAIRSAQQGGVKINGEKVDNVK------DNAPKGTNVYQVGKRKFARVRL 394


>gi|40063225|gb|AAR38052.1| tyrosyl-tRNA synthetase [uncultured marine bacterium 577]
          Length = 400

 Score =  395 bits (1015), Expect = e-108,   Method: Composition-based stats.
 Identities = 105/397 (26%), Positives = 185/397 (46%), Gaps = 23/397 (5%)

Query: 24  PRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIG 82
            +EL    S G  +    G+D TA  LH GH   L  +  LQ  GH    L+G  T +IG
Sbjct: 22  EKELKKKLSTGIPLRIKAGFDPTAPDLHLGHTVLLNKMRQLQDMGHHIQFLIGDFTGMIG 81

Query: 83  DPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLR 142
           DPS ++ +R  +  +++ EN +         +K    +    +  N  W+  +   DLL+
Sbjct: 82  DPSGKNATRPPLTREQVAENAKTYTDQVFKVLKSDQTE----VAFNSKWMSQLNAADLLK 137

Query: 143 EIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQ 202
            I S  +V RML  +    R +  Q +S  E  Y ++QAYD V L  +    +++GG+DQ
Sbjct: 138 -IASTHTVARMLERDDFGKRYQNNQPISIHELLYPLIQAYDSVMLKAD----IELGGTDQ 192

Query: 203 WGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYW 261
             N++ G +L +    P    LT PLL    G  KM K+L+  I +++        +   
Sbjct: 193 KFNLLVGRELQKHFNQPPQCILTMPLLVGLDGVNKMSKSLNNYIGIDEAA---EEIFGKI 249

Query: 262 RNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATEITTMVHGREEAEKA 319
            +I D  +  + + L+   +  I +  +   QG+   + K I A EI    H +++AEK+
Sbjct: 250 MSISDELMWQYLELLSFESLVTIRKWKQEIEQGRNPRDIKVIFAKEIVARFHNKQDAEKS 309

Query: 320 ATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKI 379
                  F      +++P I +  ++   G+G+  ++ ++G   ST+EA R ++   +K+
Sbjct: 310 IINFEARFKHGAIPENIPEIKLHSED--GGLGITKILKQSGLTASTSEALRMIEQKGVKL 367

Query: 380 NNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           N   IS++ L++KL        + +  GK+      +
Sbjct: 368 NGEKISDKSLKLKL-----GTTLVIQVGKRRFAKVTI 399


>gi|297182040|gb|ADI18214.1| tyrosyl-tRNA synthetase [uncultured gamma proteobacterium
           HF0200_40H22]
          Length = 405

 Score =  395 bits (1015), Expect = e-108,   Method: Composition-based stats.
 Identities = 105/424 (24%), Positives = 188/424 (44%), Gaps = 28/424 (6%)

Query: 1   MPAFKS-----DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLT 55
           M   K+     D L+ L  RG    +     L+ L     +   +G+D TA  LH GH  
Sbjct: 1   MTESKNQAAFQDVLAELK-RGVEEMLLEEELLERLALDRPLRVKVGFDPTAPDLHLGHTV 59

Query: 56  QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK 115
            +  +   Q+ GH+ + L+G  T +IGDPS ++ +R  + ++EI+ N    K      + 
Sbjct: 60  IINKMRQFQELGHEVVFLIGDFTGMIGDPSGKNVTRPPLTAEEIESNATTYKAQVFRILD 119

Query: 116 YGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFN 175
                   L+  N  W   +    ++R + S  +V RML  +    R K  Q ++  EF 
Sbjct: 120 ----PEKTLVEFNSKWCSELGAEGIIR-LASRHTVARMLERDDFSKRYKSGQPIAIHEFL 174

Query: 176 YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG- 234
           Y ++Q YD V L  +    ++MGG+DQ  N++ G +L ++   P    +T PLL    G 
Sbjct: 175 YPLMQGYDSVALKTD----VEMGGTDQKFNLLVGRELQKQYGQPSQVVMTLPLLEGLDGV 230

Query: 235 TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQG 292
            KM K+L   + +     +P + +    ++ D  +  + + L+   + EI+++ +  + G
Sbjct: 231 QKMSKSLGNTVGIT---DAPDDMFGKLMSVSDDLMWRYFELLSFKSLPEIEKLHESVVSG 287

Query: 293 KEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGL 352
               + K  +A EI    H   +  KA    +E F        +   ++S D    G+G+
Sbjct: 288 ANPRDVKFELAREIVDRFHTAGDGSKAQQRFVERFSQGGVPDDLEEKTLSSD--GDGLGI 345

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
            + I +AG A+ST+EA R +K  A++ +   + + K  +            L  GK+   
Sbjct: 346 ASAIKQAGLASSTSEAIRLIKQGAVRFDGERLEDPKTVLAA-----GTTGILQVGKRRIA 400

Query: 413 ICHL 416
              +
Sbjct: 401 KVFV 404


>gi|301170369|emb|CBW29975.1| tyrosyl-tRNA synthetase [Haemophilus influenzae 10810]
          Length = 395

 Score =  395 bits (1015), Expect = e-108,   Method: Composition-based stats.
 Identities = 109/419 (26%), Positives = 182/419 (43%), Gaps = 28/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M    +  L+ L  RG    +S    ++ L     +   +G D TA  +H GH   L  L
Sbjct: 1   MTDINT-VLAELK-RGTDEILSEADLIEKLKENRPLKVKLGADPTAPDIHLGHTVVLNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+   L+G  T ++GDPS ++ +R  +  +++  N E  K      +     K
Sbjct: 59  RRFQQLGHEVYFLIGDFTGMVGDPSGKNATRPPLSREDVLRNAETYKEQIYKILDPQKTK 118

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               ++ N  WL  +    ++R + S ++V RML  +  + R    Q ++  EF Y +LQ
Sbjct: 119 ----IVFNSEWLSKLGTEGMIR-LASNYTVARMLERDDFKKRFGNNQPIAIHEFIYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGK 239
            YD V L  +    +++GG+DQ  N++ G +L +        A+T PLL    G  KM K
Sbjct: 174 GYDSVALDAD----VELGGTDQKFNLLVGRELQKSAGKKPQVAITLPLLVGLDGEKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINE 297
           +L   I + +   +P + +    +I D  +  +   L+  P++EI   +     GK   +
Sbjct: 230 SLGNYIGVTE---APSDMFGKVMSISDELMWDWYNLLSFRPLNEIAQLKSEVENGKNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A E+    H  E A  A    +  F        MP  + S +     +GL TL+ 
Sbjct: 287 VKILLAKELIARFHNEEAANAAEQEFINRFQKGAMPDEMPEFTFSGE-----IGLATLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +AG   ST+EA R  +   +KIN   + N K      D    G      GK+      +
Sbjct: 342 EAGLVPSTSEAIRSAQQGGVKINGEKVDNVK------DNAPKGTNVYQVGKRKFARVTV 394


>gi|295677652|ref|YP_003606176.1| tyrosyl-tRNA synthetase [Burkholderia sp. CCGE1002]
 gi|295437495|gb|ADG16665.1| tyrosyl-tRNA synthetase [Burkholderia sp. CCGE1002]
          Length = 416

 Score =  395 bits (1015), Expect = e-108,   Method: Composition-based stats.
 Identities = 95/412 (23%), Positives = 182/412 (44%), Gaps = 30/412 (7%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           +  L     I      +      +   +   +G D TA  +H GH   L  +  LQ  GH
Sbjct: 31  VDEL----LIEDEFAQKLARSAATAKPLRIKLGLDPTAPDIHIGHTVVLNKMRQLQDLGH 86

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
             I L+G  TS+IGDPS R+ +R  +  ++I+ N +      +  +     +    +  N
Sbjct: 87  TVIFLIGDFTSLIGDPSGRNATRPPLTREQIESNAKTYFEQAALVLDRDKTE----IRYN 142

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             W   +    +++ + S ++V R+L  E    R +    +S  EF Y ++Q YD V L 
Sbjct: 143 SEWSMPLGADGMIK-LASRYTVARILEREDFTKRFQGGVPISIHEFLYPLMQGYDSVALN 201

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWL 247
            +    L++GG+DQ  N++ G +L ++    +   LT PLL    G  KM K+ +  I +
Sbjct: 202 AD----LELGGTDQKFNLLVGRELQKQYGQEQQCILTMPLLEGLDGVEKMSKSKNNYIGI 257

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATE 305
           +++   P + +    +I D  +  + + L+  PM EI   +     G+   + K ++  E
Sbjct: 258 SEK---PTDMFGKLMSISDTLMWRYFELLSFRPMDEIAGFKREAEAGRNPRDFKVMLGQE 314

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           I    H + +AE+A                +P ++++       + +  L+ +A    ST
Sbjct: 315 IVARFHSQADAERALEDF-NHRAKGGVPDDIPAVTLA----GAPLAIGQLLKQANLVPST 369

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           +EA R+++   +KI+ + +S++ L+++       G   +  GK+      L 
Sbjct: 370 SEALRNIEQGGVKIDGTAVSDKGLKVEA------GEYVVQVGKRRFARVTLT 415


>gi|312143797|ref|YP_003995243.1| tyrosyl-tRNA synthetase [Halanaerobium sp. 'sapolanicus']
 gi|311904448|gb|ADQ14889.1| tyrosyl-tRNA synthetase [Halanaerobium sp. 'sapolanicus']
          Length = 426

 Score =  394 bits (1014), Expect = e-108,   Method: Composition-based stats.
 Identities = 98/391 (25%), Positives = 174/391 (44%), Gaps = 22/391 (5%)

Query: 32  SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESR 91
               +   +G D TA  +H GH   L  L   Q  GH+   ++G  T +IGDP+ + E+R
Sbjct: 53  EGRPLKVKLGLDPTAPDIHLGHTVVLRKLKQFQDLGHQVYLIIGDFTGMIGDPTGKSETR 112

Query: 92  RMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVN 151
           + +  +E++EN    +  FS  +     K    ++ N  WL  +K+ D+L E+ + ++V 
Sbjct: 113 KQLTKEEVRENALTYQEQFSKVLDRDKTK----LVYNSDWLSEMKFSDVL-ELSAQYTVA 167

Query: 152 RMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGID 211
           RML  +    R K  + +   EF Y ++Q YD V +    +  +++GG+DQ  N++ G +
Sbjct: 168 RMLERDDFSKRYKAGKPIGIHEFFYPLMQGYDSVAI----EADVELGGTDQRFNLLVGRN 223

Query: 212 LGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVV 270
           L +         +T PLL    G  KM K+L   I +      P + +    ++ D  + 
Sbjct: 224 LQKEYGQDSQVIITMPLLEGLDGVNKMSKSLDNYIGV---YDKPADMYGKVMSMPDELIA 280

Query: 271 SFAKRLTTLPMS---EIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECF 327
            + + LT + +    EI            + KK +A E+    H  E A+ AA      F
Sbjct: 281 RYYELLTDISIEQLNEIKAKLNRDDFNPMQLKKELAAELVREYHDEEAAQYAAQEFENVF 340

Query: 328 DMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISN 386
                   +P + I K E+  G + ++ ++   G   S +EARR +K  A+ I+      
Sbjct: 341 SQGNLPDDIPEVKIEKSELDEGELWIVKIVAATGLVDSNSEARRMIKQGAVTIDGEKYDK 400

Query: 387 EKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
             L ++++D      + +  GK+      L 
Sbjct: 401 INLDLEVKD-----GMIVQIGKRRFAQIKLS 426


>gi|171319634|ref|ZP_02908728.1| tyrosyl-tRNA synthetase [Burkholderia ambifaria MEX-5]
 gi|171095125|gb|EDT40131.1| tyrosyl-tRNA synthetase [Burkholderia ambifaria MEX-5]
          Length = 413

 Score =  394 bits (1014), Expect = e-108,   Method: Composition-based stats.
 Identities = 96/416 (23%), Positives = 188/416 (45%), Gaps = 31/416 (7%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           K     +L E  F  +++         +   +   +G D TA  +H GH   L  +  LQ
Sbjct: 25  KRGVDELLIEEEFAQKLA-----RSAATGTPLRIKLGLDPTAPDIHIGHTVVLNKMRQLQ 79

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GH  I L+G  TS+IGDPS R+ +R  +  ++I+ N +      +  +     +    
Sbjct: 80  DLGHTVIFLIGDFTSLIGDPSGRNATRPPLTREQIESNAKTYFEQAALVLDREKTE---- 135

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           +  N  W   +    +++ + S ++V R+L  E    R +    +S  EF Y ++Q YD 
Sbjct: 136 IRYNSEWSMPLGADGMIK-LASRYTVARILEREDFTKRFQGGVPISIHEFLYPLMQGYDS 194

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSG 243
           V L  +    L++GG+DQ  N++ G +L ++    +   LT PLL    G  KM K+   
Sbjct: 195 VALNAD----LELGGTDQKFNLLVGRELQKQYGQEQQCILTMPLLEGLDGVEKMSKSKGN 250

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKI 301
            + ++++   P + +    +I D  +  + + L+   + EI   +     G+   + K +
Sbjct: 251 YVGISEK---PTDMFGKLMSISDTLMWRYFELLSFRSLDEIAGFKRDAEGGRNPRDFKVL 307

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGF 361
           +A EI    H + +AE+A                +P+++++       + +  L+ +AG 
Sbjct: 308 LAQEIVARFHSQADAERALEDF-NHRAKGGVPDDIPSVTLA----GAPLAIGQLLKQAGL 362

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
             ST+EA R+++   +KI+ + +S++ L+++  +F       +  GK+      L 
Sbjct: 363 VPSTSEALRNIEQGGVKIDGATVSDKGLKVEAGEF------VVQVGKRRFARVTLS 412


>gi|107021760|ref|YP_620087.1| tyrosyl-tRNA synthetase [Burkholderia cenocepacia AU 1054]
 gi|116688706|ref|YP_834329.1| tyrosyl-tRNA synthetase [Burkholderia cenocepacia HI2424]
 gi|105891949|gb|ABF75114.1| tyrosyl-tRNA synthetase [Burkholderia cenocepacia AU 1054]
 gi|116646795|gb|ABK07436.1| tyrosyl-tRNA synthetase [Burkholderia cenocepacia HI2424]
          Length = 413

 Score =  394 bits (1014), Expect = e-108,   Method: Composition-based stats.
 Identities = 96/416 (23%), Positives = 187/416 (44%), Gaps = 31/416 (7%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           K     +L E  F  +++         +   +   +G D TA  +H GH   L  +  LQ
Sbjct: 25  KRGVDELLIEEEFAQKLA-----RSAATGTPLRIKLGLDPTAPDIHIGHTVVLNKMRQLQ 79

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GH  I L+G  TS+IGDPS R+ +R  +  ++I+ N +      +  +     +    
Sbjct: 80  DLGHTVIFLIGDFTSLIGDPSGRNATRPPLTREQIESNAKTYFEQAALVLDREKTE---- 135

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           +  N  W   +    +++ + S ++V R+L  E    R +    +S  EF Y ++Q YD 
Sbjct: 136 IRYNSEWSMPLGADGMIK-LASRYTVARILEREDFTKRFQGGVPISIHEFLYPLMQGYDS 194

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSG 243
           V L  +    L++GG+DQ  N++ G +L ++    +   LT PLL    G  KM K+   
Sbjct: 195 VALNAD----LELGGTDQKFNLLVGRELQKQYGQEQQCILTMPLLEGLDGVEKMSKSKGN 250

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKI 301
            + ++++   P + +    +I D  +  + + L+   + EI   +     G+   + K +
Sbjct: 251 YVGISEK---PTDMFGKLMSISDTLMWRYFELLSFRSLDEIAGFKREAEGGRNPRDFKVL 307

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGF 361
           +A EI    H + +AE+A                +P+++++       + +  L+ +AG 
Sbjct: 308 LAQEIVARFHSQADAERALEDF-NHRAKGGVPDDIPSVTLA----GAPLAIGQLLKQAGL 362

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
             ST+EA R++    +KI+ + +S++ L+++  +F       +  GK+      L 
Sbjct: 363 VPSTSEALRNIDQGGVKIDGATVSDKGLKVEAGEF------VVQVGKRRFARVTLT 412


>gi|328952109|ref|YP_004369443.1| Tyrosyl-tRNA synthetase [Desulfobacca acetoxidans DSM 11109]
 gi|328452433|gb|AEB08262.1| Tyrosyl-tRNA synthetase [Desulfobacca acetoxidans DSM 11109]
          Length = 406

 Score =  394 bits (1014), Expect = e-107,   Method: Composition-based stats.
 Identities = 100/417 (23%), Positives = 180/417 (43%), Gaps = 28/417 (6%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
            +   + IL E     ++        L S   +    G+D TA  LH GH   +  L   
Sbjct: 10  IRRGAVEILLEEELAAKLK-----RSLASGQPLRIKAGFDPTAPDLHLGHTVLIQKLKHF 64

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q+ GH+ I L+G  T +IGDPS + E+R+ +  +E++ N    +      +         
Sbjct: 65  QELGHQVIFLIGDFTGMIGDPSGKSETRKPLTEEEVKANALTYERQIYKILD----PEKT 120

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           L+  N  W+ ++    L+ E+ +  +V RML  E    R      +S  EF Y ++Q YD
Sbjct: 121 LIDFNSRWMKAMSAQGLI-ELAARHTVARMLEREDFHQRFVNHAPISIHEFLYPLVQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLS 242
            V L  +    +++GG+DQ  N++ G +L           LT PLL    G  KM K+L 
Sbjct: 180 SVALRAD----VELGGTDQKFNLLVGRELQREYGQEPQVVLTMPLLEGLDGVNKMSKSLG 235

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAK 299
             + +++    P   +    +I D  ++ + + L+ L +  + R+             AK
Sbjct: 236 NYVGIDEP---PQEMFGKIMSISDVLMLRYYELLSDLSVGALARLKDDLASGVLHPRLAK 292

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKA 359
           + +A E+    H    AE+AA      F      + +  I ++  E    + L  ++ +A
Sbjct: 293 ENLAKEMVARYHSPGAAEEAARQFAAVFREGALPEEIEEICLAVTE--NSIWLPKVLHQA 350

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           G A  T+EARR ++   ++++   +S+ +L++ +          L  GK+      L
Sbjct: 351 GLAAGTSEARRLIQQGGVQVDGEKVSSVELELPV-----GQTYLLRVGKRKFKKVEL 402


>gi|256831133|ref|YP_003159861.1| tyrosyl-tRNA synthetase [Desulfomicrobium baculatum DSM 4028]
 gi|256580309|gb|ACU91445.1| tyrosyl-tRNA synthetase [Desulfomicrobium baculatum DSM 4028]
          Length = 398

 Score =  394 bits (1014), Expect = e-107,   Method: Composition-based stats.
 Identities = 104/402 (25%), Positives = 171/402 (42%), Gaps = 27/402 (6%)

Query: 15  RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLM 74
           RG +  I+    +  L     +    G+D TA  LH GH   +  L   Q+ GH+ I L+
Sbjct: 15  RGSVEIINEEELVAKLRRGVPLRIKAGFDPTAPDLHLGHTVLIQKLKHFQELGHQVIFLI 74

Query: 75  GGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCS 134
           G  T +IGDPS + E+R+ +  +E+  N E  K      +     +    +  N TW+ +
Sbjct: 75  GDFTGMIGDPSGKSETRKKLTREEVLRNAETYKKQIFKILDQDRTE----IAFNSTWMDT 130

Query: 135 IKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCR 194
               + + E+ S ++V RML  +    R K  Q +S  EF Y ++Q YD V L  +    
Sbjct: 131 FSAAEFI-ELCSRYTVARMLERDDFEKRFKGNQPISIHEFLYPLVQGYDSVALKAD---- 185

Query: 195 LQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTS 253
           +++GG+DQ  N++ G  L           LT P+L    G  KM K+L   I +++   +
Sbjct: 186 VELGGTDQKFNLLMGRHLQREHGQASQIVLTMPILEGLDGVQKMSKSLGNYIGIDE---A 242

Query: 254 PYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKIIATEITTMV 310
           P + +    +I D  +  + + L+   +  I       +        AK+ +A EITT  
Sbjct: 243 PGDMFGKLMSISDELMWRYYELLSDSSLERIGTLREQVQSGALHPKVAKEDLAQEITTRF 302

Query: 311 HGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARR 370
           HG E    A  A    F      + +   S+       G  L+ ++  +G  +S  +ARR
Sbjct: 303 HGAEAGVAAREAFNSVFAKQGIPEDIEVFSV-----QAGALLVDVLSDSGVCSSKGDARR 357

Query: 371 HLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
             K NA+ I+     +             G   L  GKK  +
Sbjct: 358 MCKQNAVTIDGRKEEDAAFAFAP------GEYVLKIGKKRFL 393


>gi|167904237|ref|ZP_02491442.1| tyrosyl-tRNA synthetase [Burkholderia pseudomallei NCTC 13177]
          Length = 413

 Score =  394 bits (1014), Expect = e-107,   Method: Composition-based stats.
 Identities = 97/416 (23%), Positives = 186/416 (44%), Gaps = 31/416 (7%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           K     +L E  F  +++         +   +   +G D TA  +H GH   L  +  LQ
Sbjct: 25  KRGVDELLIEEEFAQKLA-----KSAATGKPLRIKLGLDPTAPDIHLGHTVVLNKMRQLQ 79

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GH  I L+G  TS+IGDPS R+ +R  +  ++I+ N +      +  +     +    
Sbjct: 80  DLGHTVIFLIGDFTSLIGDPSGRNATRPPLTREQIESNAKTYFEQAALVLDRAKTE---- 135

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           +  N  W   +    +++ + S ++V R+L  E    R +    +S  EF Y ++Q YD 
Sbjct: 136 IRYNSEWSMPLGADGMIK-LASRYTVARILEREDFTKRFQGGIPISIHEFLYPLMQGYDS 194

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSG 243
           V L  +    L++GG+DQ  N++ G +L ++    +   LT PLL    G  KM K+   
Sbjct: 195 VALNAD----LELGGTDQKFNLLVGRELQKQYGQEQQCILTMPLLEGLDGVEKMSKSKGN 250

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKKI 301
            + ++++   P + +    +I D  +  + + L+   + EI R       G+   + K +
Sbjct: 251 YVGISEK---PTDMFGKLMSISDVLMWRYFELLSFRSLDEIARFRGEAEGGRNPRDFKVM 307

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGF 361
           +A EI    H + +AE+A                +P ++++       + +  L+ +AG 
Sbjct: 308 LAQEIVARFHSQADAERALEDF-NHRAKGGVPDDIPAVTLA----GAPLAIGQLLKQAGL 362

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
             ST+EA R+++   +KI+ + +S++ L++   +F       +  GK+      L 
Sbjct: 363 VPSTSEALRNIEQGGVKIDGATVSDKALKVDAGEF------VVQVGKRRFARVTLT 412


>gi|157364571|ref|YP_001471338.1| tyrosyl-tRNA synthetase [Thermotoga lettingae TMO]
 gi|157315175|gb|ABV34274.1| tyrosyl-tRNA synthetase [Thermotoga lettingae TMO]
          Length = 397

 Score =  394 bits (1014), Expect = e-107,   Method: Composition-based stats.
 Identities = 113/414 (27%), Positives = 189/414 (45%), Gaps = 28/414 (6%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L IL  +  +  +S    L+ L  +  +   +G D T   LH GH   L  L   Q  GH
Sbjct: 7   LEILK-KNAVDLVSEEDLLNKLTRKKQLRVKLGVDPTRPDLHLGHAVVLFKLRQFQDLGH 65

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           K I ++G  T+ IGDPS RD +R+M+   E+++N +  +      +     K    +  N
Sbjct: 66  KVILIIGDFTAQIGDPSGRDVTRQMLSESEVRQNAKTYQEQAFRILD----KEKTEVRFN 121

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL  + + D+++ + S ++V RML  +    R      +S  EF Y + QAYD V + 
Sbjct: 122 SEWLSKMSFADVIK-LASKYTVARMLERDDFSKRYSSNLPISISEFLYPLAQAYDSVAVQ 180

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWL 247
            +    +++GG+DQ+ N++ G  + E +       LT P++    G  KM K+    I  
Sbjct: 181 AD----VELGGTDQYFNLLVGRKIQEEMGQEPQVVLTMPIIEGTDGKMKMSKSYENYIAF 236

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL---QGKEINEAKKIIAT 304
           N    +P++ +    +I D  ++ + + LT +P  +I+    L   +     + K  +A 
Sbjct: 237 N---DTPFDMYGKLMSIPDELIIKYIRLLTQIPEQKINEYESLIQSKSVNPRDIKMKLAF 293

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
            IT+  HG E A KA    ++ F        MP I +   EV     L+ L+V    A+S
Sbjct: 294 AITSFFHGEEGAAKAENEFIKIFRQKELPTQMPAIELDNSEVE----LVELLVTLQIASS 349

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLCG 418
            +EARR +   A+KI++  I++   +I            L  GK+N     L G
Sbjct: 350 RSEARRLISQGAVKIDDEKITDIHAKI-----FVDREKVLRVGKRNFF--RLVG 396


>gi|288553779|ref|YP_003425714.1| tyrosyl-tRNA synthetase [Bacillus pseudofirmus OF4]
 gi|288544939|gb|ADC48822.1| tyrosyl-tRNA synthetase [Bacillus pseudofirmus OF4]
          Length = 414

 Score =  394 bits (1014), Expect = e-107,   Method: Composition-based stats.
 Identities = 105/413 (25%), Positives = 191/413 (46%), Gaps = 31/413 (7%)

Query: 9   LSILSERGFIHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           L IL  RG +  I+   EL     +       +   +G D +A  +H GH   L  L   
Sbjct: 19  LEILK-RGVVE-ITPEHELKKKIEKSVRTGKPLKVKLGMDPSAPDVHLGHTVPLHKLRQF 76

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q+ GH+   L+G  T  IGDP+ + E+R+ +  ++++ N       +   +        A
Sbjct: 77  QELGHEIQMLIGDFTGRIGDPTGKSETRKQLSDEDVKRNAMTYVEQYGKILD----MEKA 132

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            +  N  WL ++ + D++  + +  +V RML  +    R K  Q +S  EF Y ++Q YD
Sbjct: 133 TIYYNSEWLKALSFEDVIG-LSANMTVARMLERDDFEKRYKSGQPISIHEFFYPLMQGYD 191

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLS 242
            V L  +    +++GG+DQ  N++ G  L E     K  A+T PL+    G  KM K+L+
Sbjct: 192 SVALESD----IEVGGTDQKFNLLMGRTLQEAYGKEKQVAMTLPLIEGLDGERKMSKSLN 247

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAK 299
             I +++   SP   +    +I D  ++ + K  T +PM EI   +   K       +AK
Sbjct: 248 NYIGIDE---SPNEIFGKSMSIPDELMIKYYKLATDIPMDEINALEEGIKNGSVHPRDAK 304

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKA 359
             +  +   M HG++ A++A +     F        +P +  S ++    + ++ L+V+ 
Sbjct: 305 MNLGAKFVEMYHGKDAADEAKSYFQTVFQKRTLPTDIPEVKWSGEDA---VWVVELLVEL 361

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
              +S  EARR +++  +K+N   + + + QIK++D      + +  GK+   
Sbjct: 362 KMMSSKGEARRMVQNGGVKVNEEKVEDVQAQIKIED-----GLIVQVGKRKFA 409


>gi|39938955|ref|NP_950721.1| tyrosyl-tRNA synthetase [Onion yellows phytoplasma OY-M]
 gi|81402377|sp|Q6YQA6|SYY_ONYPE RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|39722064|dbj|BAD04554.1| tyrosyl-tRNA synthetase [Onion yellows phytoplasma OY-M]
          Length = 413

 Score =  394 bits (1013), Expect = e-107,   Method: Composition-based stats.
 Identities = 136/416 (32%), Positives = 212/416 (50%), Gaps = 16/416 (3%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           F   L  R  I   SN  ++  L     V  Y G+D T+ SL  GHL Q+ ++  +Q+ G
Sbjct: 3   FYEELKWRNLIKDCSNETQVKELLDNNQVKFYCGFDPTSHSLTVGHLVQITMILLMQRQG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H P+ L+GG T +IGDP    E R+++  +   +N + I+    + +           +N
Sbjct: 63  HLPVILVGGATGLIGDPK-ETEERKLLSLENSLQNAKSIECQLKNIL----LNKQVEFVN 117

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  I  I  LR  G  F++N MLS  +V  RL     +SF EF+YMILQ+ DF  L
Sbjct: 118 NYQWLSQIDIISFLRNYGKLFNINYMLSKHAVAKRLAS--GISFTEFSYMILQSLDFHHL 175

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLLTTASGTKMGKTLSGAIW 246
            KN+  RLQ+GGSDQWGNI  G++L  +L+       +++PLL  + GTK GK+  G +W
Sbjct: 176 YKNHKVRLQLGGSDQWGNITSGLELIRKLEKKSDALGISTPLLLNSDGTKFGKSEKGVLW 235

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIAT 304
           +N  MTSPY  +QY+ N+ D +V+++ K LT +P  EI  + K  L+  +   A+K +  
Sbjct: 236 VNPSMTSPYEIYQYFLNVSDKEVINYLKMLTLIPKQEILELEKNTLENPQQRLAQKALTQ 295

Query: 305 EITTMVHGREEAEKAATAAMECFD----MSIHSQH--MPTISISKDEVSRGMGLLTLIVK 358
            I T++H  +  ++        F      S   +   +   ++        + L+  +V+
Sbjct: 296 NIITLIHSSDILQECIKTNQILFSNAKKESFQEKDFILLQKTLFCHSTKEDILLVDALVQ 355

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
              ATS +EAR  +K N IK+ N  I +    I  ++      + L  GKKN+ + 
Sbjct: 356 TKLATSKSEAREFIKDNTIKLFNQKIKSLDFAITKKNTLFDKYVLLKKGKKNNALI 411


>gi|242009572|ref|XP_002425557.1| tyrosyl-tRNA synthetase, putative [Pediculus humanus corporis]
 gi|212509436|gb|EEB12819.1| tyrosyl-tRNA synthetase, putative [Pediculus humanus corporis]
          Length = 463

 Score =  394 bits (1013), Expect = e-107,   Method: Composition-based stats.
 Identities = 139/437 (31%), Positives = 224/437 (51%), Gaps = 30/437 (6%)

Query: 7   DFLSILSERGFIHQI----SNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
           + L  L ERGF   +    +    LD L +    T Y G+D TA SLH G+L  L+ L  
Sbjct: 27  NVLK-LHERGFYSDLFPYKTADEVLD-LLNSADQTVYAGFDPTADSLHIGNLLVLINLLH 84

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIE----KIKGIFSSFIKYGT 118
            Q++GH+ I+L+GG T+ IGDPS +   R  M++  ++EN E     IK IF + ++Y  
Sbjct: 85  WQRSGHQVIALIGGATAQIGDPSGKLSERDKMKAHLVEENTEKIENCIKNIFDNHLEYFC 144

Query: 119 GKTDAL-------MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSF 171
            K +         ++NN  W C++  ++ +  IG  F +  ML  +S+R+R+  ++ LSF
Sbjct: 145 DKGETHKNIQELQIVNNTDWYCNMSALNFINNIGRNFRLGPMLGKQSIRTRMSTDEGLSF 204

Query: 172 LEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT 231
            EF+Y I QAYD++ L +NY+CR Q+GGSDQ GNI+ G DL ++     ++ LT PL+TT
Sbjct: 205 SEFSYQIFQAYDWLHLFQNYNCRFQVGGSDQLGNIVSGYDLIQKFHKVPVYGLTIPLITT 264

Query: 232 ASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ 291
             G K GKT   AIWL+KE TS +  +Q+   I D+DV       T   M +I  +    
Sbjct: 265 EEGDKFGKTAGNAIWLSKEKTSAFQLYQFLIRIKDSDVQKLLMLFTFETMPKILEIMNEH 324

Query: 292 GKEINE--AKKIIATEITTMVHGREEAEKAATAAMECFD------MSIHSQHMPTI---- 339
            K  ++  A+K++A  I  +VHG    ++A       ++        +    + ++    
Sbjct: 325 WKTPHKRIAQKVLAENIVKLVHGPAGLQQAENVTAALYENNLEHLKKLEPLDLQSVFEGA 384

Query: 340 SISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK-LQDFDS 398
           + ++  +  G  +L   VKAG   + ++A R + +    IN+  ++N +  I        
Sbjct: 385 TFTELLLEPGTTILEAAVKAGCFKTKSDAVRIISAGGFYINHQKVNNGQEVISMPSHILP 444

Query: 399 TGNIKLSFGKKNHIICH 415
                +  GKKN+ I  
Sbjct: 445 NNVSLMRVGKKNYTIVK 461


>gi|126440034|ref|YP_001060382.1| tyrosyl-tRNA synthetase [Burkholderia pseudomallei 668]
 gi|126219527|gb|ABN83033.1| tyrosine--tRNA ligase [Burkholderia pseudomallei 668]
          Length = 413

 Score =  394 bits (1013), Expect = e-107,   Method: Composition-based stats.
 Identities = 97/416 (23%), Positives = 185/416 (44%), Gaps = 31/416 (7%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           K     +L E  F  +++         +   +   +G D TA  +H GH   L  +  LQ
Sbjct: 25  KRGVDELLIEEEFAQKLA-----KSAATGKPLRIKLGLDPTAPDIHLGHTVVLNKMRQLQ 79

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GH  I L+G  TS+IGDPS R+ +R  +  ++I+ N        +  +     +    
Sbjct: 80  DLGHTVIFLIGDFTSLIGDPSGRNATRPPLTREQIESNARTYFEQAALVLDREKTE---- 135

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           +  N  W   +    +++ + S ++V R+L  E    R +    +S  EF Y ++Q YD 
Sbjct: 136 IRYNSEWSMPLGADGMIK-LASRYTVARILEREDFTKRFQGGIPISIHEFLYPLMQGYDS 194

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSG 243
           V L  +    L++GG+DQ  N++ G +L ++    +   LT PLL    G  KM K+   
Sbjct: 195 VALNAD----LELGGTDQKFNLLVGRELQKQYGQEQQCILTMPLLEGLDGVEKMSKSKGN 250

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKKI 301
            + ++++   P + +    +I D  +  + + L+   + EI R       G+   + K +
Sbjct: 251 YVGISEK---PTDMFGKLMSISDVLMWRYFELLSFRSLDEIARFRGEAEGGRNPRDFKVM 307

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGF 361
           +A EI    H + +AE+A                +P ++++       + +  L+ +AG 
Sbjct: 308 LAQEIVARFHSQADAERALEDF-NHRAKGGVPDDIPAVTLA----GAPLAIGQLLKQAGL 362

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
             ST+EA R+++   +KI+ + +S++ L++   +F       +  GK+      L 
Sbjct: 363 VPSTSEALRNIEQGGVKIDGATVSDKALKVDAGEF------VVQVGKRRFARVTLT 412


>gi|291392439|ref|XP_002712724.1| PREDICTED: tyrosyl-tRNA synthetase 2, mitochondrial-like
           [Oryctolagus cuniculus]
          Length = 478

 Score =  394 bits (1013), Expect = e-107,   Method: Composition-based stats.
 Identities = 133/432 (30%), Positives = 209/432 (48%), Gaps = 29/432 (6%)

Query: 13  SERGFIHQISNPR----ELDILCSQG-----VVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
             RG   +    R    EL  L  +G       T Y G+D T+ SLH GHL  L+ LF  
Sbjct: 43  KARGLFKEFFPERGTKTELPELFDRGSGSFSPQTVYCGFDPTSDSLHVGHLLALLGLFHF 102

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK-----YGT 118
           Q+ GH  I+L+GG T+ +GDPS R + R  + ++ +  N   ++    +        +G 
Sbjct: 103 QRAGHNVIALVGGATARLGDPSGRTKEREALGAECVGANARALRAGLEALAANHQQLFGD 162

Query: 119 GKTD--ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNY 176
           G+      +L+N  W      +D L  +G  F +  +LS  SV++RLK  + +S  EF Y
Sbjct: 163 GRAWGSFTVLDNSAWYGQQHLVDFLAAVGGHFRMGTLLSRLSVQTRLKSPEGMSLAEFLY 222

Query: 177 MILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTK 236
            +LQAYDF  L + Y CR+Q+GGSDQ GNI  G +   +L    +F +  PL+T+ +G K
Sbjct: 223 QVLQAYDFYYLFQRYGCRVQLGGSDQLGNITSGYEFVHKLTGEDVFGIMVPLITSTTGAK 282

Query: 237 MGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI- 295
           +GK+   A+WL++E TSP+  +Q++    D+ V  + K  T LP+ EID + +L  KE  
Sbjct: 283 LGKSAGNAVWLSRERTSPFELYQFFLRQQDSAVERYLKLFTFLPLPEIDHLMQLHLKEPE 342

Query: 296 -NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM----------PTISISKD 344
               +K +A E+T +VHGRE  + A       +  SI +  +             S S+ 
Sbjct: 343 KRVPQKRLAAEVTKLVHGREGLDSAKRCTQALYHSSIDALEVLSDQELKELFREASFSEL 402

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL-QDFDSTGNIK 403
            +  G  +L    KA          R +    + IN+  ++N +  + + Q     G   
Sbjct: 403 VLDPGTSVLDTCRKANAIPDGPRGYRMITEGGVSINHRQVTNPESVLVVGQHILKNGLSL 462

Query: 404 LSFGKKNHIICH 415
           L  GK+N  +  
Sbjct: 463 LKIGKRNFYVIK 474


>gi|145627738|ref|ZP_01783539.1| tyrosyl-tRNA synthetase [Haemophilus influenzae 22.1-21]
 gi|144979513|gb|EDJ89172.1| tyrosyl-tRNA synthetase [Haemophilus influenzae 22.1-21]
          Length = 395

 Score =  394 bits (1013), Expect = e-107,   Method: Composition-based stats.
 Identities = 111/419 (26%), Positives = 183/419 (43%), Gaps = 28/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M    +  L+ L  RG    +S    ++ L     +   +G D TA  +H GH   L  L
Sbjct: 1   MTDINT-VLAELK-RGTDEILSEADLIEKLKENRPLKVKLGADPTAPDIHLGHTVVLNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+   L+G  T ++GDPS ++ +R  +  +++  N E  K      +     K
Sbjct: 59  RQFQQLGHEVYFLIGDFTGMVGDPSGKNATRPPLSREDVLRNAETYKEQIYKILDPQKTK 118

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               ++ N  WL  +    ++R + S ++V RML  +  + R    Q ++  EF Y +LQ
Sbjct: 119 ----IVFNSEWLSKLGTEGMIR-LASNYTVARMLERDDFKKRFGNNQPIAIHEFIYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGK 239
            YD V L  +    +++GG+DQ  N++ G +L +        A+T PLL    G  KM K
Sbjct: 174 GYDSVALDAD----VELGGTDQKFNLLVGRELQKSAGKKPQVAITLPLLVGLDGEKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINE 297
           +L   I + +   +P + +    +I D  + ++   L+  P+SEI   +     GK   +
Sbjct: 230 SLGNYIGVTE---APSDMFGKVMSISDELMWNWYNLLSFRPLSEIAQLKSEVENGKNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A E+    H  E A  A    +  F        MP  + S +     MGL TL+ 
Sbjct: 287 VKILLAKELIARFHNEEAANAAEQEFINRFQKGAMPDEMPEFTFSGE-----MGLATLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +AG   ST+EA R  +   +KIN   + N K      D    G      GK+      +
Sbjct: 342 EAGLVPSTSEAIRSAQQGGVKINGEKVDNVK------DNAPKGTNVYQVGKRKFARVTV 394


>gi|167740156|ref|ZP_02412930.1| tyrosyl-tRNA synthetase [Burkholderia pseudomallei 14]
          Length = 413

 Score =  394 bits (1013), Expect = e-107,   Method: Composition-based stats.
 Identities = 97/416 (23%), Positives = 185/416 (44%), Gaps = 31/416 (7%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           K     +L E  F  +++         +   +   +G D TA  +H GH   L  +  LQ
Sbjct: 25  KRGVDELLIEEEFAQKLA-----KSAATGKPLRIKLGLDPTAPDIHLGHTVVLNKMRQLQ 79

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GH  I L+G  TS+IGDPS R+ +R  +  ++I+ N +      +  +     +    
Sbjct: 80  DLGHTVIFLIGDFTSLIGDPSGRNATRPPLTREQIESNAKTYFEQAALVLDREKTE---- 135

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           +  N  W   +    +++ + S ++V RML  E    R +    +   EF Y ++Q YD 
Sbjct: 136 IRYNSEWSMPLGADGMIK-LASRYTVARMLEREDFTKRFQGGIPILIHEFLYPLMQGYDS 194

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSG 243
           V L  +    L++GG+DQ  N++ G +L ++    +   LT PLL    G  KM K+   
Sbjct: 195 VALNAD----LELGGTDQKFNLLVGRELQKQYGQEQQCILTMPLLEGLDGVEKMSKSKGN 250

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKKI 301
            + ++++   P + +    +I D  +  + + L+   + EI R       G+   + K +
Sbjct: 251 YVGISEK---PTDMFGKLMSISDVLMWRYFELLSFRSLDEIARFRGEAEGGRNPRDFKVM 307

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGF 361
           +A EI    H + +AE+A                +P ++++       + +  L+ +AG 
Sbjct: 308 LAQEIVARFHSQADAERALEDF-NHRAKGGVPDDIPAVTLA----GAPLAIGQLLKQAGL 362

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
             ST+EA R+++   +KI+ + +S++ L++   +F       +  GK+      L 
Sbjct: 363 VPSTSEALRNIEQGGVKIDGATVSDKALKVDAGEF------VVQVGKRRFARVTLT 412


>gi|322418401|ref|YP_004197624.1| tyrosyl-tRNA synthetase [Geobacter sp. M18]
 gi|320124788|gb|ADW12348.1| tyrosyl-tRNA synthetase [Geobacter sp. M18]
          Length = 403

 Score =  394 bits (1013), Expect = e-107,   Method: Composition-based stats.
 Identities = 107/422 (25%), Positives = 186/422 (44%), Gaps = 30/422 (7%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLML 59
           M   K   + IL E+  +       +L+     G  +    G+D TA  LH GH   L  
Sbjct: 7   MEIIKRGAVEILVEKELV------EKLEKSVKTGVPLKIKAGFDPTAPDLHLGHTVLLHK 60

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG 119
           +   QK GH+   L+G  T +IGDP+ + E+R+++  +++ +N E  K      +     
Sbjct: 61  MRQFQKLGHEVHFLIGDFTGMIGDPTGKSETRKVLTREDVLKNAETYKEQVFKILDPKLT 120

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
           K    ++ N  WL  +   D++  + S ++V RML  E   +R   +  +S  EF Y ++
Sbjct: 121 K----VVFNSEWLGKLSASDMIG-LASKYTVARMLEREDFSNRFANQLPISIHEFMYPLV 175

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMG 238
           Q YD V L  +    +++GG+DQ  N++ G +L           +T PLL    G  KM 
Sbjct: 176 QGYDSVALKAD----VELGGTDQKFNLLVGRELQREWGQAPQCVITMPLLEGLDGVNKMS 231

Query: 239 KTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EI 295
           K+L   I +N+        +    +I D  +V + + L+ L M+E +++           
Sbjct: 232 KSLGNYIGINEPAD---EIYGKVMSISDQLMVRYYELLSDLTMAEFEQLKADLKGGALHP 288

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTL 355
            EAKK +A E+    HG E A  A    ++ F  +     MP  ++  +     + L  +
Sbjct: 289 MEAKKQLAREMVARYHGAEAAALAGENFVKRFKNNETPDEMPEFTLKPE--GEKVLLCKV 346

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           + +A    S +E RR ++   +K+N   +S+E L+I        G   +  GK+      
Sbjct: 347 LAEAQLTKSNSEGRRSIQGGGVKVNGDKVSDENLEIACA-----GEYIIQVGKRRFAKVR 401

Query: 416 LC 417
             
Sbjct: 402 FA 403


>gi|68249800|ref|YP_248912.1| tyrosyl-tRNA synthetase [Haemophilus influenzae 86-028NP]
 gi|145633010|ref|ZP_01788742.1| ribose-phosphate pyrophosphokinase [Haemophilus influenzae 3655]
 gi|229846285|ref|ZP_04466397.1| tyrosyl-tRNA synthetase [Haemophilus influenzae 7P49H1]
 gi|81335774|sp|Q4QL45|SYY_HAEI8 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|68057999|gb|AAX88252.1| tyrosyl-tRNA synthetase [Haemophilus influenzae 86-028NP]
 gi|144986236|gb|EDJ92815.1| ribose-phosphate pyrophosphokinase [Haemophilus influenzae 3655]
 gi|229811289|gb|EEP47006.1| tyrosyl-tRNA synthetase [Haemophilus influenzae 7P49H1]
          Length = 395

 Score =  394 bits (1013), Expect = e-107,   Method: Composition-based stats.
 Identities = 110/419 (26%), Positives = 183/419 (43%), Gaps = 28/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M    +  L+ L  RG    +S    ++ L     +   +G D TA  +H GH   L  L
Sbjct: 1   MTNINT-VLAELK-RGTDEILSEADLIEKLKENRPLKVKLGADPTAPDIHLGHTVVLNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+   L+G  T ++GDPS ++ +R  +  +++  N E  K      +     K
Sbjct: 59  RQFQQLGHEVYFLIGDFTGMVGDPSGKNATRPPLSREDVLRNAETYKEQIYKILDPQKTK 118

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               ++ N  WL  +    ++R + S ++V RML  +  + R    Q ++  EF Y +LQ
Sbjct: 119 ----IVFNSEWLSKLGTEGMIR-LASNYTVARMLERDDFKKRFGNNQPIAIHEFIYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGK 239
            YD V L  +    +++GG+DQ  N++ G +L +        A+T PLL    G  KM K
Sbjct: 174 GYDSVALDAD----VELGGTDQKFNLLVGRELQKSAGKKPQVAITLPLLVGLDGEKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINE 297
           +L   I + +   +P + +    +I D  +  +   L+  P+SEI   +    +GK   +
Sbjct: 230 SLGNYIGVTE---APSDMFGKVMSISDELMWDWYNLLSFRPLSEIAQLKSEVEKGKNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A E+    H  E A  A    +  F        MP  + S +     +GL TL+ 
Sbjct: 287 VKILLAKELIARFHNEEAANAAEQEFINRFQKGAMPDEMPEFTFSGE-----IGLATLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +AG   ST+EA R  +   +KIN   + N K      D    G      GK+      +
Sbjct: 342 EAGLVPSTSEAIRSAQQGGVKINGEKVDNVK------DNAPKGTNVYQVGKRKFARVTV 394


>gi|229844790|ref|ZP_04464928.1| tyrosyl-tRNA synthetase [Haemophilus influenzae 6P18H1]
 gi|229812171|gb|EEP47862.1| tyrosyl-tRNA synthetase [Haemophilus influenzae 6P18H1]
          Length = 395

 Score =  394 bits (1013), Expect = e-107,   Method: Composition-based stats.
 Identities = 110/419 (26%), Positives = 183/419 (43%), Gaps = 28/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M    +  L+ L  RG    +S    ++ L     +   +G D TA  +H GH   L  L
Sbjct: 1   MTDINT-VLAELK-RGTDEILSEADLIEKLKENRPLKVKLGADPTAPDIHLGHTVVLNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+   L+G  T ++GDPS ++ +R  +  +++  N E  K      +     K
Sbjct: 59  RQFQQLGHEVYFLIGDFTGMVGDPSGKNATRPPLSREDVLRNAETYKEQIYKILDPQKTK 118

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               ++ N  WL  +    ++R + S ++V RML  +  + R    Q ++  EF Y +LQ
Sbjct: 119 ----IVFNSEWLSKLGTEGMIR-LASNYTVARMLERDDFKKRFGNNQPIAIHEFIYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGK 239
            YD V L  +    +++GG+DQ  N++ G +L +        A+T PLL    G  KM K
Sbjct: 174 GYDSVALDAD----VELGGTDQKFNLLVGRELQKSAGKKPQVAITLPLLVGLDGEKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINE 297
           +L   I + +   +P + +    +I D  +  +   L+  P+SEI   +     GK   +
Sbjct: 230 SLGNYIGVTE---APSDMFGKVMSISDELMWDWYNLLSFRPLSEIAQLKSEVENGKNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A E+ +  H  E A  A    +  F        MP  + S +     +GL TL+ 
Sbjct: 287 VKILLAKELISRFHNEEAANAAEQEFINRFQKGAMPDEMPEFTFSGE-----IGLATLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +AG   ST+EA R  +   +KIN   + N K      D    G      GK+      +
Sbjct: 342 EAGLVPSTSEAIRSAQQGGVKINGEKVDNVK------DNAPKGTNVYQVGKRKFARVTV 394


>gi|90413143|ref|ZP_01221139.1| tyrosyl-tRNA synthetase [Photobacterium profundum 3TCK]
 gi|90325834|gb|EAS42286.1| tyrosyl-tRNA synthetase [Photobacterium profundum 3TCK]
          Length = 395

 Score =  394 bits (1012), Expect = e-107,   Method: Composition-based stats.
 Identities = 103/419 (24%), Positives = 179/419 (42%), Gaps = 28/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M + +     I  +RG    I     +  L     +   +G D TA  +H GH   L  L
Sbjct: 1   MASIEQALAEI--KRGIDELIPEEELIAKLKENRPLRIKLGADPTAPDIHLGHTVILNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH    L+G  T ++GDP+ ++ +R  +  +++  N E  K      +     K
Sbjct: 59  RTFQELGHDVTFLIGDFTGMVGDPTGKNTTRPPLTREDVLANAETYKEQVFKILDPAKTK 118

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N TWL  +    ++R + S  +V RML  +  + R    + ++  EF Y +LQ
Sbjct: 119 ----IEFNSTWLSELGAEGMIR-LASNQTVARMLERDDFKKRYNGGRPIAIHEFMYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGK 239
            YD V +    +  +++GG+DQ  N++ G +L +         LT PLL    G  KM K
Sbjct: 174 GYDSVAM----ETDVELGGTDQKFNLLMGRELQKSHGQKPQVVLTMPLLVGLDGVKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINE 297
           +    I +++    P   +    +I D  + ++ + L+  P+ EI++  +    GK   +
Sbjct: 230 SAHNYIGVSE---VPTEMFGKIMSISDDLMWNYFECLSFRPLEEIEQFKQDMANGKNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A EI    H   +A+ A    +  F      + MP +     E   G+ +  L+ 
Sbjct: 287 VKILLAKEIIARFHSAADADAAEQEFINRFQKGAMPEEMPEL-----EFEAGIAISNLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            AG   ST++A R ++  A KI+ + I + KL          G      GK+      L
Sbjct: 342 DAGLVNSTSDAMRMIRQGAAKIDGNKIEDTKLIPAA------GTAVYQVGKRKFARITL 394


>gi|15618276|ref|NP_224561.1| tyrosyl-tRNA synthetase [Chlamydophila pneumoniae CWL029]
 gi|4376637|gb|AAD18505.1| tyrosyl tRNA Synthetase [Chlamydophila pneumoniae CWL029]
          Length = 422

 Score =  394 bits (1012), Expect = e-107,   Method: Composition-based stats.
 Identities = 139/430 (32%), Positives = 217/430 (50%), Gaps = 33/430 (7%)

Query: 3   AFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
           +    +L  L ER  +   +    L+ +  +G + AY+G+D TA +LH GH   +  L  
Sbjct: 9   SLMQSWLQSLQERNILENFT--AGLESV--EGPIAAYLGFDPTAPALHIGHWIGICFLKR 64

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD 122
           L   G  PI+L+GG T ++GDPS +   R ++++ E+ +N +KI      ++        
Sbjct: 65  LAALGITPIALVGGATGMVGDPSGKQSERSLLQTSEVFDNSQKITACLQRYL------PG 118

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
             ++NN  WL  I  ID L +IG  F + +ML  ++++ R+  ++ +S+ EF+Y+ILQ+Y
Sbjct: 119 VTLVNNADWLQEISLIDFLGDIGKHFRLGQMLVKDTIKQRVHSDEGISYTEFSYLILQSY 178

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DF  L KNY   LQ GGSDQWGNI  GID   R    + + LT PLLT A G K+GKT S
Sbjct: 179 DFYHLFKNYGTILQCGGSDQWGNITSGIDFIRRKGLGQAYGLTYPLLTNAQGKKIGKTES 238

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKII 302
           G +WL+ ++TSP+  +QY   + D  +   A+ LT L   EI  + +    +    K+ +
Sbjct: 239 GTVWLDSDLTSPFELYQYLLRLPDDTIPKIARTLTLLSNEEIQDIDRRVQTDPVAVKEFV 298

Query: 303 ATEITTMVHGREEAEKA----------------ATAAMECFDMSIHSQHMPTISISKDEV 346
           A +I + +HG    E+A                     E F   + +      S+ K EV
Sbjct: 299 AQDILSAIHGDLGLEEALSVTRSMHPGNLSSLSEKDFHELFAGGMGA------SLDKSEV 352

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
             G   L L +  G   S  E RR ++   + INN  I+NE    + QD      + L+ 
Sbjct: 353 -LGKRWLDLFLVLGLCKSKGEIRRLIEQKGVYINNVPIANEHSVCEEQDICYGHYVLLAQ 411

Query: 407 GKKNHIICHL 416
           GKK  ++ +L
Sbjct: 412 GKKRKLVLYL 421


>gi|145637486|ref|ZP_01793144.1| ribose-phosphate pyrophosphokinase [Haemophilus influenzae PittHH]
 gi|145269292|gb|EDK09237.1| ribose-phosphate pyrophosphokinase [Haemophilus influenzae PittHH]
          Length = 395

 Score =  394 bits (1012), Expect = e-107,   Method: Composition-based stats.
 Identities = 109/419 (26%), Positives = 182/419 (43%), Gaps = 28/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M    +  L+ L  RG    +S    ++ L     +   +G D TA  +H GH   L  L
Sbjct: 1   MTDINT-VLAELK-RGTDEILSEADLIEKLKENRPLKVKLGADPTAPDIHLGHTVVLNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+   L+G  T ++GDPS ++ +R  +  +++  N E  K      +     K
Sbjct: 59  RQFQQLGHEVYFLIGDFTGMVGDPSGKNATRPPLSREDVLRNAETYKEQIYKILDPQKTK 118

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               ++ N  WL  +    ++R + S ++V RML  +  + R    Q ++  EF Y +LQ
Sbjct: 119 ----IVFNSEWLSKLGTEGMIR-LASNYTVARMLERDDFKKRFGNNQPIAIHEFIYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGK 239
            YD V L  +    +++GG+DQ  N++ G +L +        A+T PLL    G  KM K
Sbjct: 174 GYDSVALDAD----VELGGTDQKFNLLVGRELQKSAGKKPQVAITLPLLVGLDGEKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINE 297
           +L   I + +   +P + +    +I D  +  +   L+  P++EI   +     GK   +
Sbjct: 230 SLGNYIGVTE---APSDMFGKVMSISDELMWDWYNLLSFRPLNEIAQLKSEVENGKNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A E+    H  E A  A    +  F        MP  + S +     +GL TL+ 
Sbjct: 287 VKILLAKELIARFHNEEAANAAEQEFINRFQKGAMPDEMPEFTFSGE-----IGLATLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +AG   ST+EA R  +   +KIN   + N K      D    G      GK+      +
Sbjct: 342 EAGLVPSTSEAIRSAQQGGVKINGEKVDNVK------DNAPKGTNVYQVGKRKFARVTV 394


>gi|118082933|ref|XP_416363.2| PREDICTED: hypothetical protein [Gallus gallus]
          Length = 548

 Score =  394 bits (1012), Expect = e-107,   Method: Composition-based stats.
 Identities = 127/439 (28%), Positives = 217/439 (49%), Gaps = 29/439 (6%)

Query: 6   SDFLSILSERGFIHQISN----PRELDILCSQG--VVTAYIGYDLTASSLHAGHLTQLML 59
              L+   ERG   ++        +L+ L   G   V  Y G+D TA SLH GHL  +M 
Sbjct: 106 KGLLAEQCERGLFQEVFPAQGADEQLEALLEPGRPPVAVYCGFDPTADSLHVGHLPAVMA 165

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY--- 116
           L   Q+ GH  ++++GG T+ +GDPS R+ +R  + ++ ++ +   ++      ++    
Sbjct: 166 LLHFQRAGHTVLAVVGGATARLGDPSGRERAREPLEAERVRAHARGLREGLGRLLENHRA 225

Query: 117 -------GTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSL 169
                  G     A +L+N  WL     +D L   G    +  +LS ++ ++RL+  + +
Sbjct: 226 LFWPAGGGRPLGRAELLDNAWWLSREPLLDFLCGAGGRLRMGTLLSRQACQARLRSAEGM 285

Query: 170 SFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLL 229
           S  EF Y  LQAYDF+ L +++ CR+Q+GG+DQ GNI+ G +L  ++    +F +T PL+
Sbjct: 286 SLAEFLYPALQAYDFLHLHRHHGCRVQLGGADQMGNIMSGYELVTKMTGTDVFGITVPLI 345

Query: 230 TTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK 289
           T+ +G K+GKT   A+WLN++ TSP+  +Q++    D  V  + K  T LP+ EID + +
Sbjct: 346 TSTTGDKLGKTAGNAVWLNRDKTSPFELYQFFVRQQDDIVEKYLKLFTFLPLEEIDHIME 405

Query: 290 LQGKEINE--AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS-QHMPTISI----- 341
           +  +E  +   +K +A E+T +VHGRE  E A       +  S+ + + M    +     
Sbjct: 406 MHAREPEKWGPQKRLAAEVTKLVHGREGLESAKRCTKALYHSSVEALEAMSDQELQELFR 465

Query: 342 ----SKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL-QDF 396
               ++  +  G  LL L  KA          + +    + +N   ++N +  + L Q  
Sbjct: 466 QAPSAELILEPGTTLLDLCRKANAIPHGPSGYQKITDGGVSVNGIRVTNPETVLILGQHI 525

Query: 397 DSTGNIKLSFGKKNHIICH 415
              G   L  GKKN+ I  
Sbjct: 526 LKNGVSLLRIGKKNYYIIK 544


>gi|258515600|ref|YP_003191822.1| tyrosyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771]
 gi|257779305|gb|ACV63199.1| tyrosyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771]
          Length = 406

 Score =  394 bits (1012), Expect = e-107,   Method: Composition-based stats.
 Identities = 103/413 (24%), Positives = 186/413 (45%), Gaps = 26/413 (6%)

Query: 11  ILSERGFIHQISNPRELDILCSQ----GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
            + +RG +  I     +  L +       +   +G D TA  +H GH   L  +   Q  
Sbjct: 9   EIIKRGAVEIIPEEELVQKLKNSIETGKPLVIKLGLDPTAPDIHLGHTVVLQKMRQFQDL 68

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHK I ++G  T  IGDP+ + E+R+ +  +E+ EN +  +      +     K    ++
Sbjct: 69  GHKAIIILGDFTGRIGDPTGKSETRKQLTEEEVLENAKTYERQIFKILDAEKTK----LV 124

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
            N  WL  + + D++ E+ + ++V RML  +    R +    +S  EF Y ++Q YD V 
Sbjct: 125 FNSEWLGKLNFADVI-ELSAKYTVARMLERDDFAKRYRENLPISIHEFFYPLMQGYDSVA 183

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAI 245
           L    +  +++GG+DQ  N++ G  L +        A+T P++    G  KM K+L   I
Sbjct: 184 L----EADVELGGTDQKFNLLMGRTLQKEYGQKPQIAITMPIIEGLDGVQKMSKSLGNYI 239

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSE---IDRMAKLQGKEINEAKKII 302
            +++   SP   +    +I D  +V + + +T +P+ E   I    +       + K  +
Sbjct: 240 GVDE---SPREMYGKTMSITDEIMVRYFELVTQVPLEEVRAISEGLQNSTMHPRDVKMRL 296

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGF 361
           A EIT + HG+E A +A       F        +P   I +D +  G + +  L+ +AG 
Sbjct: 297 AREITAVYHGQEAALQAEEEFKRIFQQGDLPDDIPDFVIKEDGLENGTIRMDKLLFQAGL 356

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +S +EA+R +    +KI+   + +   +         GNI +  GK+  I  
Sbjct: 357 TSSASEAKRLISQGGVKIDGHKVEDSLYEYAP----VMGNI-IRVGKRKFIRI 404


>gi|145639920|ref|ZP_01795520.1| tyrosyl-tRNA synthetase [Haemophilus influenzae PittII]
 gi|145641762|ref|ZP_01797338.1| tyrosyl-tRNA synthetase [Haemophilus influenzae R3021]
 gi|145271011|gb|EDK10928.1| tyrosyl-tRNA synthetase [Haemophilus influenzae PittII]
 gi|145273576|gb|EDK13446.1| tyrosyl-tRNA synthetase [Haemophilus influenzae 22.4-21]
 gi|309751098|gb|ADO81082.1| Tyrosyl-tRNA synthetase [Haemophilus influenzae R2866]
          Length = 395

 Score =  394 bits (1012), Expect = e-107,   Method: Composition-based stats.
 Identities = 111/419 (26%), Positives = 182/419 (43%), Gaps = 28/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M    +  L+ L  RG    +S    ++ L     +   +G D TA  +H GH   L  L
Sbjct: 1   MTDINT-VLAELK-RGTDEILSEADLIEKLKENRPLKVKLGADPTAPDIHLGHTVVLNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+   L+G  T ++GDPS ++ +R  +  +++  N E  K      +     K
Sbjct: 59  RQFQQLGHEVYFLIGDFTGMVGDPSGKNATRPPLSREDVLRNAETYKEQIYKILDPQKTK 118

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               ++ N  WL  +    ++R + S ++V RML  +  + R    Q ++  EF Y +LQ
Sbjct: 119 ----IVFNSEWLSKLGTEGMIR-LASNYTVARMLERDDFKKRFGNNQPIAIHEFIYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGK 239
            YD V L  +    +++GG+DQ  N++ G +L +        A+T PLL    G  KM K
Sbjct: 174 GYDSVALDAD----VELGGTDQKFNLLVGRELQKSAGKKPQVAITLPLLVGLDGEKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINE 297
           +L   I + +   +P + +    +I D  +  +   L+  P+SEI   +     GK   +
Sbjct: 230 SLGNYIGVTE---APSDMFGKVMSISDELMWDWYNLLSFRPLSEIAQLKSEVENGKNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A E+    H  E A  A    +  F        MP  + S +     MGL TL+ 
Sbjct: 287 VKILLAKELIARFHNEEAANAAEQEFINRFQKGAMPDEMPEFTFSGE-----MGLATLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +AG   ST+EA R  +   +KIN   + N K      D    G      GK+      +
Sbjct: 342 EAGLVPSTSEAIRSAQQGGVKINGEKVDNVK------DNAPKGTNVYQVGKRKFARVTV 394


>gi|148828405|ref|YP_001293158.1| tyrosyl-tRNA synthetase [Haemophilus influenzae PittGG]
 gi|148719647|gb|ABR00775.1| tyrosyl-tRNA synthetase [Haemophilus influenzae PittGG]
          Length = 395

 Score =  394 bits (1012), Expect = e-107,   Method: Composition-based stats.
 Identities = 110/419 (26%), Positives = 182/419 (43%), Gaps = 28/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M    +  L+ L  RG    +S    ++ L     +   +G D TA  +H GH   L  L
Sbjct: 1   MTDINT-VLAELK-RGTDEILSEADLIEKLKENRPLKVKLGADPTAPDIHLGHTVVLNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+   L+G  T ++GDPS ++ +R  +  +++  N E  K      +     K
Sbjct: 59  RQFQQLGHEVYFLIGDFTGMVGDPSGKNATRPPLSREDVLRNAETYKEQIYKILDPQKTK 118

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               ++ N  WL  +    ++R + S ++V RML  +  + R    Q ++  EF Y +LQ
Sbjct: 119 ----IVFNSEWLSKLGTEGMIR-LASNYTVARMLERDDFKKRFGNNQPIAIHEFIYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGK 239
            YD V L  +    +++GG+DQ  N++ G +L +        A+T PLL    G  KM K
Sbjct: 174 GYDSVALDAD----VELGGTDQKFNLLVGRELQKSAGKKPQVAITLPLLVGLDGEKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINE 297
           +L   I + +   +P + +    +I D  +  +   L+  P+SEI   +     GK   +
Sbjct: 230 SLGNYIGVTE---APSDMFGKVMSISDELMWDWYNLLSFRPLSEIAQLKSEVENGKNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A E+    H  E A  A    +  F        MP  + S +     +GL TL+ 
Sbjct: 287 VKILLAKELIARFHNEEAANAAEQEFINRFQKGAMPDEMPEFTFSGE-----IGLATLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +AG   ST+EA R  +   +KIN   + N K      D    G      GK+      +
Sbjct: 342 EAGLVPSTSEAIRSAQQGGVKINGEKVDNVK------DNAPKGTNVYQVGKRKFARVTI 394


>gi|220931414|ref|YP_002508322.1| Tyrosyl-tRNA synthetase [Halothermothrix orenii H 168]
 gi|219992724|gb|ACL69327.1| Tyrosyl-tRNA synthetase [Halothermothrix orenii H 168]
          Length = 407

 Score =  394 bits (1012), Expect = e-107,   Method: Composition-based stats.
 Identities = 110/417 (26%), Positives = 188/417 (45%), Gaps = 27/417 (6%)

Query: 9   LSILSERGFIHQISNPRELDILC----SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           L+IL  RG    I+       L         +   +G D TA  +H GH   L  L   Q
Sbjct: 7   LNILK-RGVSELITEKELKKKLELAREEGRPLRVKLGLDPTAPDIHLGHSVVLRKLKQFQ 65

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GH+   ++G  T +IGDP+ +  +R+ +  +E++EN +  +  FS  +     K    
Sbjct: 66  DLGHEVYLIIGDFTGMIGDPTGKSVTRKQLTEEEVRENAKTYREQFSKILNPDKTK---- 121

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           ++ N  WL  +   D++ E+ S ++V RML  E    R K  + +S  EF Y ++Q YD 
Sbjct: 122 LVFNSNWLSDLNLSDVI-ELSSKYTVARMLEREDFSQRYKSGKPISIHEFIYPLMQGYDS 180

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSG 243
           V +  +    +++GG+DQ  N++ G  L +         +  P+L    G  KM K+L  
Sbjct: 181 VAIKAD----IELGGTDQKFNLLVGRHLQKEFGQKPQVIMMMPILEGLDGVNKMSKSLDN 236

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM---AKLQGKEINEAKK 300
            I +N E   P + +    +I D+ +  + + LT +P  +I+ M    +         KK
Sbjct: 237 YIGINDE---PKDMYGKVMSIPDSLITRYFELLTDVPEDKINEMKKSMEEDRVNPMNFKK 293

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKA 359
            +A  I T  HG++ A +A       F      + +P + I + ++  G M ++ LI   
Sbjct: 294 ELARIIVTEYHGQDAAREAEKEFKRVFSQGKLPEDIPEVIIEQKDLEDGKMWIVHLIAAT 353

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           G   S +EARR +K  A+ IN+    +    IK++D      + +  GK+      L
Sbjct: 354 GLVKSNSEARRMIKQGAVSINDEKHKSINEDIKVED-----GMIIRIGKRRFAKIKL 405


>gi|115350631|ref|YP_772470.1| tyrosyl-tRNA synthetase [Burkholderia ambifaria AMMD]
 gi|170699601|ref|ZP_02890640.1| tyrosyl-tRNA synthetase [Burkholderia ambifaria IOP40-10]
 gi|115280619|gb|ABI86136.1| tyrosyl-tRNA synthetase [Burkholderia ambifaria AMMD]
 gi|170135483|gb|EDT03772.1| tyrosyl-tRNA synthetase [Burkholderia ambifaria IOP40-10]
          Length = 413

 Score =  394 bits (1012), Expect = e-107,   Method: Composition-based stats.
 Identities = 96/416 (23%), Positives = 188/416 (45%), Gaps = 31/416 (7%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           K     +L E  F  +++         +   +   +G D TA  +H GH   L  +  LQ
Sbjct: 25  KRGVDELLIEEEFAQKLA-----RSAATGTPLRIKLGLDPTAPDIHIGHTVVLNKMRQLQ 79

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GH  I L+G  TS+IGDPS R+ +R  +  ++I+ N +      +  +     +    
Sbjct: 80  DLGHTVIFLIGDFTSLIGDPSGRNATRPPLTREQIESNAKTYFEQAALVLDREKTE---- 135

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           +  N  W   +    +++ + S ++V R+L  E    R +    +S  EF Y ++Q YD 
Sbjct: 136 IRYNSEWSMPLGADGMIK-LASRYTVARILEREDFTKRFQGGVPISIHEFLYPLMQGYDS 194

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSG 243
           V L  +    L++GG+DQ  N++ G +L ++    +   LT PLL    G  KM K+   
Sbjct: 195 VALNAD----LELGGTDQKFNLLVGRELQKQYGQEQQCILTMPLLEGLDGVEKMSKSKGN 250

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKI 301
            + ++++   P + +    +I D  +  + + L+   + EI   +     G+   + K +
Sbjct: 251 YVGISEK---PTDMFGKLMSISDTLMWRYFELLSFRSLDEIAGFKRDAEGGRNPRDFKVL 307

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGF 361
           +A EI    H + +AE+A                +P+++++       + +  L+ +AG 
Sbjct: 308 LAQEIVARFHSQADAERALDDF-NHRAKGGVPDDIPSVTLA----GAPLAIGQLLKQAGL 362

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
             ST+EA R+++   +KI+ + +S++ L+++  +F       +  GK+      L 
Sbjct: 363 VPSTSEALRNIEQGGVKIDGATVSDKGLKVEAGEF------VVQVGKRRFARVTLS 412


>gi|312884002|ref|ZP_07743719.1| tyrosyl-tRNA synthetase [Vibrio caribbenthicus ATCC BAA-2122]
 gi|309368460|gb|EFP95995.1| tyrosyl-tRNA synthetase [Vibrio caribbenthicus ATCC BAA-2122]
          Length = 395

 Score =  394 bits (1012), Expect = e-107,   Method: Composition-based stats.
 Identities = 98/419 (23%), Positives = 181/419 (43%), Gaps = 28/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M + ++    I  +RG    I     +  L     +   +G D TA  +H GH      L
Sbjct: 1   MASIEAALAEI--KRGVEELIPEEELIAKLKEGRPLRIKLGADPTAPDIHLGHTVIFNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+   L+G  T+++GDP+ ++ +R  +  +++ +N E  K      +     K
Sbjct: 59  RLFQELGHEVTFLIGDFTAMVGDPTGKNSTRPPLSREDVLKNAETYKEQVFKILDPNKTK 118

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N  WL  +    ++R + +  +V RML  +  + R    Q ++  EF Y +LQ
Sbjct: 119 ----IQFNSEWLSELGAEGMIR-LAANQTVARMLERDDFKKRYSGGQPIAIHEFMYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGK 239
            +D V +    +  +++GG+DQ  N++ G +L +         L  PLL    G  KM K
Sbjct: 174 GWDSVAM----ETDVELGGTDQKFNLLMGRELQKSNGQKPQVVLMMPLLVGLDGEKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINE 297
           + +  I +++   +P   +    +I D  +  +   L+  P+SEI  +     QG+   +
Sbjct: 230 SANNYIGISE---APSEMFGKIMSISDDLMWDYYDLLSFRPLSEIADLKASIAQGQNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A EI    H   +A+ A    +  F  +   + MP  + +      G  +  L+ 
Sbjct: 287 VKVLLAKEIIARFHSEVDADAAEQEFVNRFAKNQIPEEMPEFNFTL-----GTPVSNLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            AG  +ST+EA R +K  A KI+   +++ K   +       G      GK+      +
Sbjct: 342 DAGLCSSTSEAMRMVKQGAAKIDGEKVADAKFTPEQ------GTYVFQVGKRKFARLTI 394


>gi|237803468|ref|ZP_04591053.1| tyrosyl-tRNA synthetase [Pseudomonas syringae pv. oryzae str. 1_6]
 gi|331025450|gb|EGI05506.1| tyrosyl-tRNA synthetase [Pseudomonas syringae pv. oryzae str. 1_6]
          Length = 399

 Score =  393 bits (1011), Expect = e-107,   Method: Composition-based stats.
 Identities = 103/409 (25%), Positives = 174/409 (42%), Gaps = 24/409 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG    +     ++ L     +    G+D TA  LH GH   +  L   Q  GH+ I
Sbjct: 10  LIKRGADELLVEAELVEKLKRGQPLRIKAGFDPTAPDLHLGHTVLINKLRQFQDLGHQVI 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T +IGDPS +  +R  +  +++ +  E  K      +     +    +  N TW
Sbjct: 70  FLIGDFTGMIGDPSGKSATRPPLTREQVLDYAETYKSQVFKILDPAKTE----VAFNSTW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +  +   D +R + S ++V RML  +    R K  QS++  EF Y ++Q YD V L  + 
Sbjct: 126 MDKLSPADFIR-LSSQYTVARMLERDDFDKRYKSNQSIAIHEFLYPLVQGYDSVALKAD- 183

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G +L           LT PLL    G  KM K+L   + + + 
Sbjct: 184 ---VELGGTDQKFNLLMGRELQRSYGQEPQCILTMPLLEGLDGVKKMSKSLGNYVGIQE- 239

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEITT 308
             +P   +    +I D+ +  + + L+   M EI+  +     G    + K  +A E+  
Sbjct: 240 --APGIMYSKLVSIPDSLMWRYFELLSFRSMEEINGFKADCEAGANPRDIKIKLAEELVA 297

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
             HG E A  A  +A          + +P IS++  E    M +  ++ KAG   +   A
Sbjct: 298 RFHGEEAAASAHRSAGNRMKEGELPEDLPEISVAAAE---DMPISAVLNKAGLVKNAAVA 354

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           R  L S  ++I+  ++ +     KL             GKK      L 
Sbjct: 355 RDLLASGGVRIDGEVV-DRSFVFKL-----GATHVCQAGKKAFGRVTLV 397


>gi|319897278|ref|YP_004135473.1| tyrosyl-tRNA synthetase [Haemophilus influenzae F3031]
 gi|317432782|emb|CBY81147.1| tyrosyl-tRNA synthetase [Haemophilus influenzae F3031]
          Length = 395

 Score =  393 bits (1011), Expect = e-107,   Method: Composition-based stats.
 Identities = 110/419 (26%), Positives = 182/419 (43%), Gaps = 28/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M    +  L+ L  RG    +S    ++ L     +   +G D TA  +H GH   L  L
Sbjct: 1   MTDINT-VLAELK-RGTDEILSETDLIEKLKENRPLKVKLGADPTAPDIHLGHTVVLNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+   L+G  T ++GDPS ++ +R  +  +++  N E  K      +     K
Sbjct: 59  RQFQQLGHEVYFLIGDFTGMVGDPSGKNATRPPLSREDVLRNAETYKEQIYKILDPQKTK 118

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               ++ N  WL  +    ++R + S ++V RML  +  + R    Q ++  EF Y +LQ
Sbjct: 119 ----IVFNSEWLSKLGTEGMIR-LASNYTVARMLERDDFKKRFGNNQPIAIHEFIYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGK 239
            YD V L  +    +++GG+DQ  N++ G +L +        A+T PLL    G  KM K
Sbjct: 174 GYDSVALDAD----VELGGTDQKFNLLVGRELQKSAGKKPQVAITLPLLVGLDGEKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINE 297
           +L   I + +   +P + +    +I D  +  +   L+  P+SEI   +     GK   +
Sbjct: 230 SLGNYIGVTE---APSDMFGKVMSISDELMWDWYNLLSFRPLSEIAQLKSEVENGKNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A E+    H  E A  A    +  F        MP  + S +     +GL TL+ 
Sbjct: 287 VKILLAKELIARFHNEEAANAAEQEFINRFQKGAMPDEMPEFTFSGE-----IGLATLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +AG   ST+EA R  +   +KIN   + N K      D    G      GK+      +
Sbjct: 342 EAGLVPSTSEAIRSAQQGGVKINGEKVDNVK------DNAPKGTNVYQVGKRKFARVTI 394


>gi|107099634|ref|ZP_01363552.1| hypothetical protein PaerPA_01000650 [Pseudomonas aeruginosa PACS2]
          Length = 399

 Score =  393 bits (1011), Expect = e-107,   Method: Composition-based stats.
 Identities = 105/408 (25%), Positives = 172/408 (42%), Gaps = 24/408 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG    +     L  L     +    G+D TA  LH GH   +  L   Q  GH+ I
Sbjct: 10  LIQRGADEILVEAELLAKLKRGQPLRIKAGFDPTAPDLHLGHTVLINKLRQFQDLGHQVI 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T +IGDPS +  +R  +  +++ EN E  K      +     +    +  N TW
Sbjct: 70  FLIGDFTGMIGDPSGKSVTRPPLTREQVLENAETYKSQVFKILDPAKTE----VAFNSTW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +  +   D +R + S ++V RML  +    R    Q ++  EF Y ++Q YD V L  + 
Sbjct: 126 MDQLTPADFIR-LASQYTVARMLERDDFSKRYASNQPIAIHEFLYPLVQGYDSVALKAD- 183

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G +L           LT PLL    G  KM K+L   I + + 
Sbjct: 184 ---VELGGTDQKFNLLMGRELQRAYGQEAQVILTMPLLEGLDGVKKMSKSLGNYIGIQE- 239

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEITT 308
             +P   +    +I D  +  + + L+   + EID  R     G    + K  +A EI  
Sbjct: 240 --APGVMYSKLVSIPDTLMWRYFELLSFRSLDEIDSFRKDVEAGANPRDIKIKLAEEIVA 297

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
             HG E A  A  +A          + +P I +S  E    M + +++ KAG   +   A
Sbjct: 298 RFHGEEAAASAHKSAGNRLKEGELPEDLPEIELSSPE---DMPVASVLNKAGLVKNAAAA 354

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           R  L + ++K++  ++ +    + L             GKK      L
Sbjct: 355 RDLLGAGSVKVDGQVV-DRTFMLAL-----GETRVFQAGKKAFARITL 396


>gi|330891258|gb|EGH23919.1| tyrosyl-tRNA synthetase [Pseudomonas syringae pv. mori str. 301020]
          Length = 398

 Score =  393 bits (1011), Expect = e-107,   Method: Composition-based stats.
 Identities = 104/409 (25%), Positives = 174/409 (42%), Gaps = 24/409 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG    +     ++ L     +    G+D TA  LH GH   +  L   Q  GH+ I
Sbjct: 10  LIKRGADELLVEAELVEKLKRGQPLRIKAGFDPTAPDLHLGHTVLINKLRQFQDLGHQVI 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T +IGDPS +  +R  +  +++ +  E  K      +     +    +  N TW
Sbjct: 70  FLIGDFTGMIGDPSGKSATRPPLTREQVLDYAETYKSQVFKILDPAKTE----VAFNSTW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +  +   D +R + S ++V RML  +    R K  QS++  EF Y ++Q YD V L  + 
Sbjct: 126 MDKLSPADFIR-LSSQYTVARMLERDDFDKRYKSNQSIAIHEFLYPLVQGYDSVALKAD- 183

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G +L           LT PLL    G  KM K+L   + + + 
Sbjct: 184 ---VELGGTDQKFNLLMGRELQRAYGQEPQCILTMPLLEGLDGVKKMSKSLGNYVGIQE- 239

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEITT 308
             +P   +    +I D+ +  + + L+   M EI+  R     G    + K  +A E+  
Sbjct: 240 --APGIMYSKLVSIPDSLMWRYFELLSFRSMEEINGLRADCEAGANPRDIKIKLAEELVA 297

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
             HG E A  A  +A            +P IS++  E    M +  ++ KAG   +   A
Sbjct: 298 RFHGEEAAANAHRSAGNRMKEGELPDDLPEISVAATE---DMPISAVLNKAGLVKNAAVA 354

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           R  L S  ++I+  ++ +     KL             GKK     +L 
Sbjct: 355 RDLLASGGVRIDGEVV-DRGFVFKL-----GATHVCQAGKKAFGRVNLV 397


>gi|15835894|ref|NP_300418.1| tyrosyl-tRNA synthetase [Chlamydophila pneumoniae J138]
 gi|8978733|dbj|BAA98569.1| tyrosyl tRNA synthetase [Chlamydophila pneumoniae J138]
          Length = 422

 Score =  393 bits (1011), Expect = e-107,   Method: Composition-based stats.
 Identities = 139/430 (32%), Positives = 217/430 (50%), Gaps = 33/430 (7%)

Query: 3   AFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
           +    +L  L ER  +   +    L+ +  +G + AY+G+D TA +LH GH   +  L  
Sbjct: 9   SLMQSWLQSLQERNILENFT--AGLESV--EGPIAAYLGFDPTAPALHIGHWIGICFLKR 64

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD 122
           L   G  PI+L+GG T ++GDPS +   R ++++ E+ +N +KI      ++        
Sbjct: 65  LAALGITPIALVGGATGMVGDPSGKQSERSLLQTSEVFDNSQKITACLQRYL------PG 118

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
             ++NN  WL  I  ID LR+IG  F + +ML  ++++ R+  ++ +S+ EF+Y+ILQ+Y
Sbjct: 119 VTLVNNADWLQEISLIDFLRDIGKHFRLGQMLVKDTIKQRVHSDEGISYTEFSYLILQSY 178

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DF  L KNY   LQ GGSDQWGNI  GID   R    + + LT PLLT A G K+GKT S
Sbjct: 179 DFYHLFKNYGTILQCGGSDQWGNITSGIDFIRRKGLGQAYGLTYPLLTNAQGKKIGKTES 238

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKII 302
           G +WL+ ++TSP+  +QY   + D  +   A+ LT L   EI  + +    +    K+ +
Sbjct: 239 GTVWLDSDLTSPFELYQYLLRLPDDTIPKIARTLTLLSNEEIQDIDRRVQTDPVAVKEFV 298

Query: 303 ATEITTMVHGREEAEKA----------------ATAAMECFDMSIHSQHMPTISISKDEV 346
           A +I + +HG    E+A                     E F   + +      S+ K EV
Sbjct: 299 AQDILSAIHGDLGLEEALSVTRSMHPGNLSSLSEKDFHELFAGGMGA------SLDKSEV 352

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
                L   +V  G   S  E RR ++   + INN  I+NE    + QD      + L+ 
Sbjct: 353 LGKRWLGLFLV-LGLCKSKGEIRRLIEQKGVYINNVPIANEHSVCEEQDICYGHYVLLAQ 411

Query: 407 GKKNHIICHL 416
           GKK  ++ +L
Sbjct: 412 GKKRKLVLYL 421


>gi|325578247|ref|ZP_08148382.1| tyrosine--tRNA ligase [Haemophilus parainfluenzae ATCC 33392]
 gi|325159983|gb|EGC72112.1| tyrosine--tRNA ligase [Haemophilus parainfluenzae ATCC 33392]
          Length = 395

 Score =  393 bits (1011), Expect = e-107,   Method: Composition-based stats.
 Identities = 107/420 (25%), Positives = 177/420 (42%), Gaps = 28/420 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M    +  L+ L  RG    +S    ++ L     +   +G D TA  +H GH   L  L
Sbjct: 1   MTDINT-VLAELK-RGTDEILSEADLIEKLKENRPLKIKLGADPTAPDIHLGHTVVLNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+   L+G  T ++GDPS ++ +R  +  +++  N E  K      +     K
Sbjct: 59  RQFQQLGHEVYFLIGDFTGMVGDPSGKNTTRPPLSREDVLRNAETYKEQIYKILDPQKTK 118

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               ++ N  WL  +    ++R + S ++V RML  +  + R    Q ++  EF Y +LQ
Sbjct: 119 ----IVFNSEWLGKLGTEGMIR-LASNYTVARMLERDDFKKRFGNNQPIAIHEFIYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGK 239
            +D V L    +  +++GG+DQ  N++ G +L +        A+T PLL    G  KM K
Sbjct: 174 GHDSVAL----EADVELGGTDQKFNLLVGRELQKSAGQKPQVAITLPLLVGLDGEKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINE 297
           +L   I +     +P + +    +I D  +  +   L+  P++EI         GK   +
Sbjct: 230 SLGNYIGVT---DAPSDMFGKIMSISDELMWDWYNLLSFRPLTEIAELKAEVANGKNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A EI    H    AE A    +  F        MP  +         +GL TL+ 
Sbjct: 287 VKILLAKEIIARFHDEAAAEAAEQEFINRFQKGAMPDEMPEFT-----FEGEIGLATLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           +AG   ST+EA R  K   +KIN   + + K           G      GK+      + 
Sbjct: 342 EAGLVPSTSEAIRSAKQGGVKINGEKVEDMKAN------APKGTNVYQVGKRKFARVTIA 395


>gi|307730951|ref|YP_003908175.1| tyrosyl-tRNA synthetase [Burkholderia sp. CCGE1003]
 gi|307585486|gb|ADN58884.1| tyrosyl-tRNA synthetase [Burkholderia sp. CCGE1003]
          Length = 416

 Score =  393 bits (1011), Expect = e-107,   Method: Composition-based stats.
 Identities = 97/412 (23%), Positives = 182/412 (44%), Gaps = 30/412 (7%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           +  L     I      +      +   +   +G D TA  +H GH   L  +  LQ  GH
Sbjct: 31  VDEL----LIEDEFAQKLARSAATGTPLRIKLGLDPTAPDIHIGHTVVLNKMRQLQDLGH 86

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
             I L+G  TS+IGDPS R+ +R  +  ++I+ N +      +  +     +    +  N
Sbjct: 87  TVIFLIGDFTSLIGDPSGRNATRPPLTREQIESNAKTYFEQAALVLDREKTE----IRYN 142

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             W   +    +++ + S ++V R+L  E    R +    +S  EF Y ++Q YD V L 
Sbjct: 143 SEWSMPLGADGMIK-LASRYTVARILEREDFTKRFQSGVPISIHEFLYPLMQGYDSVALN 201

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWL 247
            +    L++GG+DQ  N++ G +L ++    +   LT PLL    G  KM K+ +  I +
Sbjct: 202 AD----LELGGTDQKFNLLVGRELQKQYGQEQQCILTMPLLEGLDGVEKMSKSKNNYIGI 257

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATE 305
           +++   P + +    +I D  +  + + L+  PM EI   R     G+   + K ++  E
Sbjct: 258 SEK---PTDMFGKLMSISDTLMWRYFELLSFRPMDEIAAFRKEAEAGRNPRDFKVMLGQE 314

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           I    H + +AE+A                +P +++S       + +  L+ +A    ST
Sbjct: 315 IVARFHSQADAERALEDF-NHRAKGGVPDDIPAVALS----GAPLAIGQLLKQANLVPST 369

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           +EA R+++   +KI+ + +S++ L+++       G   +  GK+      L 
Sbjct: 370 SEALRNIEQGGVKIDGATVSDKGLKVEA------GEYVVQVGKRRFARVSLT 415


>gi|260580386|ref|ZP_05848215.1| tyrosyl-tRNA synthetase [Haemophilus influenzae RdAW]
 gi|260093063|gb|EEW76997.1| tyrosyl-tRNA synthetase [Haemophilus influenzae RdAW]
          Length = 395

 Score =  393 bits (1011), Expect = e-107,   Method: Composition-based stats.
 Identities = 110/419 (26%), Positives = 182/419 (43%), Gaps = 28/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M    +  L+ L  RG    +S    ++ L     +   +G D TA  +H GH   L  L
Sbjct: 1   MTDINT-VLAELK-RGTDEILSEADLIEKLKENRPLKVKLGADPTAPDIHLGHTVVLNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+   L+G  T ++GDPS ++ +R  +  +++  N E  K      +     K
Sbjct: 59  RQFQQLGHEVYFLIGDFTGMVGDPSGKNATRPPLSREDVLRNAETYKEQIYKILDPQKTK 118

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               ++ N  WL  +    ++R + S ++V RML  +  + R    Q ++  EF Y +LQ
Sbjct: 119 ----IVFNSEWLSKLGTEGMIR-LASNYTVARMLERDDFKKRFGNNQPIAIHEFIYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGK 239
            YD V L  +    +++GG+DQ  N++ G +L +        A+T PLL    G  KM K
Sbjct: 174 GYDSVALDAD----VELGGTDQKFNLLVGRELQKSAGKKPQVAITLPLLVGLDGEKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINE 297
           +L   I + +   +P + +    +I D  +  +   L+  P++EI   +     GK   +
Sbjct: 230 SLGNYIGVTE---APSDMFGKVMSISDELMWDWYNLLSFRPLNEIAQLKSEVENGKNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A E+    H  E A  A    +  F        MP  + S +     MGL TL+ 
Sbjct: 287 VKILLAKELIARFHNEEAANAAEQEFINRFQKGAMPDEMPEFTFSGE-----MGLATLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +AG   ST+EA R  +   +KIN   + N K      D    G      GK+      +
Sbjct: 342 EAGLVPSTSEAIRSAQQGGVKINGEKVDNVK------DNAPKGTNVYQVGKRKFARVTV 394


>gi|77461319|ref|YP_350826.1| tyrosyl-tRNA synthetase [Pseudomonas fluorescens Pf0-1]
 gi|115305819|sp|Q3K5W9|SYY_PSEPF RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|77385322|gb|ABA76835.1| tyrosyl-tRNA synthetase [Pseudomonas fluorescens Pf0-1]
          Length = 399

 Score =  393 bits (1011), Expect = e-107,   Method: Composition-based stats.
 Identities = 101/408 (24%), Positives = 170/408 (41%), Gaps = 24/408 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG    +     ++ L     +    G+D TA  LH GH   +  L   Q+ GH+ I
Sbjct: 10  LIKRGAEELLVESELIEKLKRGQPLRIKAGFDPTAPDLHLGHTVLINKLRQFQELGHQVI 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T +IGDPS +  +R  +  +++ EN E  K      +     +    +  N TW
Sbjct: 70  FLIGDFTGMIGDPSGKSATRPPLTREQVLENAETYKTQVFKILDPAKTE----VAFNSTW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +  +   D +R + S ++V RML  +    R    Q ++  EF Y ++Q YD V L  + 
Sbjct: 126 MDQMGPADFIR-LTSQYTVARMLERDDFDKRYTTNQPIAIHEFLYPLVQGYDSVALRAD- 183

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G +L           LT PLL    G  KM K+L   + + + 
Sbjct: 184 ---VELGGTDQKFNLLMGRELQRGYGQEAQCILTMPLLEGLDGVKKMSKSLGNYVGIQE- 239

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATEITT 308
             +P   +    +I DA +  + + L+   M EI+        G    + K  +A EI  
Sbjct: 240 --APGVMYSKLVSIPDALMWRYFELLSFRSMDEINAFRADVEAGANPRDIKIKLAEEIVA 297

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
             HG E A  A   A            +P + ++  E    M +  ++ KAG   ++  A
Sbjct: 298 RFHGEEAAANAHRGAGNRMKDGELPDDLPEVELTAAE---DMPIAAVLNKAGLVKNSAAA 354

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           R  L S  ++++  ++ +      L             GKK      L
Sbjct: 355 RDLLASGGVRVDGEVV-DRSFIYVL-----GATHVCQAGKKAFARITL 396


>gi|209517518|ref|ZP_03266358.1| tyrosyl-tRNA synthetase [Burkholderia sp. H160]
 gi|209502051|gb|EEA02067.1| tyrosyl-tRNA synthetase [Burkholderia sp. H160]
          Length = 416

 Score =  393 bits (1011), Expect = e-107,   Method: Composition-based stats.
 Identities = 94/412 (22%), Positives = 181/412 (43%), Gaps = 30/412 (7%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           +  L     I      +      +   +   +G D TA  +H GH   L  +  LQ  GH
Sbjct: 31  VDEL----LIEDEFAQKLARSAATGKPLRIKLGLDPTAPDIHIGHTVVLNKMRQLQDLGH 86

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
             I L+G  TS+IGDPS R+ +R  +  ++I+ N +      +  +     +    +  N
Sbjct: 87  TVIFLIGDFTSLIGDPSGRNATRPPLTREQIESNAKTYFEQAALVLDRDKTE----IRYN 142

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             W   +    +++ + S ++V R+L  E    R +    +S  EF Y ++Q YD V L 
Sbjct: 143 SEWSMPLGADGMIK-LASRYTVARILEREDFTKRFQGGVPISIHEFLYPLMQGYDSVALN 201

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWL 247
            +    L++GG+DQ  N++ G +L ++    +   LT PLL    G  KM K+ +  I +
Sbjct: 202 AD----LELGGTDQKFNLLVGRELQKQYGQEQQCILTMPLLEGLDGVEKMSKSKNNYIGI 257

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATE 305
           +++   P   +    +I D  +  + + L+  P+ EI   +     G+   + K ++  E
Sbjct: 258 SEK---PTEMFGKLMSISDTLMWRYFELLSFRPLDEIAGFKREADAGRNPRDFKVMLGQE 314

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           I    H + +AE+A                +P ++++       + +  L+ +A    ST
Sbjct: 315 IVARFHSQADAERALEDF-NHRAKGGVPDDIPAVTLA----GAPLAIGQLLKQANLVPST 369

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           +EA R+++   +KI+ + +S++ L+++       G   +  GK+      L 
Sbjct: 370 SEALRNIEQGGVKIDGTAVSDKGLKVEA------GEYVVQVGKRRFARVTLT 415


>gi|78043825|ref|YP_360390.1| tyrosyl-tRNA synthetase [Carboxydothermus hydrogenoformans Z-2901]
 gi|115305800|sp|Q3ABU4|SYY_CARHZ RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|77995940|gb|ABB14839.1| tyrosyl-tRNA synthetase [Carboxydothermus hydrogenoformans Z-2901]
          Length = 411

 Score =  393 bits (1010), Expect = e-107,   Method: Composition-based stats.
 Identities = 107/414 (25%), Positives = 188/414 (45%), Gaps = 27/414 (6%)

Query: 11  ILSERGFIHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
            + +RG + +I    EL     +       +   +G D TA  +H GH   L  L   Q 
Sbjct: 11  EIIKRG-VAEIVPEEELVEKLKKSLNEGKPLRVKLGLDPTAPDIHLGHTVVLQKLKQFQS 69

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+ I ++G  T+ IGDP+ + E+R+ +  +E+ EN +  +      +     K    M
Sbjct: 70  LGHEVIIIIGDFTAQIGDPTGKKETRKQLSWEEVLENAKTYQEQIFKILDPAKTK----M 125

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           + N  WL  + + D+++ + S ++V RML  E    R K  Q +S  EF Y ++Q YD V
Sbjct: 126 VFNSEWLAKLTFADVIK-LASKYTVARMLEREDFAKRFKEGQPISIHEFFYPLMQGYDSV 184

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGA 244
            L  +    +++GG+DQ  N++ G  L +        A+  P+L    G  KM K+L   
Sbjct: 185 ALKAD----IELGGTDQKFNLLMGRTLQKEYGQEPQIAIMMPILEGTDGVQKMSKSLGNY 240

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAKKI 301
           I +N+   +P   +    +I D  ++ + + LT++PM  I+ M            +AK  
Sbjct: 241 IGINE---TPQEMFGKIMSIPDTLILRYLELLTSVPMETINEMKIQMETGVLNPRDAKVF 297

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLL-TLIVKAG 360
           +A EI T  H RE A++A    ++ F        +P   +  + +  G+ LL  ++  AG
Sbjct: 298 LAKEIITQYHSREAADEAEREFIKIFREKELPDEIPEYKVPGELIDGGVVLLPKVLFSAG 357

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
              S +EA+R +   A+ +N   I++    +K           +  GK+  +  
Sbjct: 358 TVKSISEAKRLISQGAVLVNQEKINDINFVLKPS----KEPYTVKVGKRRFLKI 407


>gi|81448578|sp|Q8DBX3|SYY2_VIBVU RecName: Full=Tyrosyl-tRNA synthetase 2; AltName:
           Full=Tyrosine--tRNA ligase 2; Short=TyrRS 2
          Length = 396

 Score =  393 bits (1010), Expect = e-107,   Method: Composition-based stats.
 Identities = 97/420 (23%), Positives = 176/420 (41%), Gaps = 27/420 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M + ++    I  +RG    I     +  L     +   +G D TA  +H GH   L  L
Sbjct: 1   MASIEAALAEI--KRGVEELIPEEELIAKLKEGRPLRIKLGADPTAPDIHLGHTVILNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GH    L+G  T ++GDP+ ++ +R  +  +++  N E  K      +     K
Sbjct: 59  RAFQDLGHDVTFLIGDFTGMVGDPTGKNSTRPPLTREDVLRNAETYKQQVFKILDPAKTK 118

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N  WL  +    ++R + +  +V RML  +  + R    Q ++  EF Y +LQ
Sbjct: 119 ----IQFNSEWLSELGAEGMIR-LAANQTVARMLERDDFKKRYAGGQPIAIHEFMYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGK 239
            YD V +    +  +++GG+DQ  N++ G +L +         L  PLL    G  KM K
Sbjct: 174 GYDSVAM----ETDVELGGTDQKFNLLMGRELQKANGQKPQVVLMMPLLVGLDGEKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINE 297
           + +  I +++   +P   +    +I D  + S+ + L+  P+ E+ +       GK   +
Sbjct: 230 SANNYIGVSE---APSEMFGKIMSISDDLMWSYYELLSFRPLEELAQFKADVAAGKNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A EI    H   +A+ A    +  F  +     MP  +      + G  +  L+ 
Sbjct: 287 IKVLLAKEIIARFHSEADADAAEQEFVNRFAKNQIPDEMPEFT-----FAAGTPMANLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           +A   +ST+EA R +K  A K++   + + K +           I    GK+      + 
Sbjct: 342 EAELCSSTSEAMRMVKQGAAKMDGEKVEDAKSRTSP-----LAPIVFQVGKRKFARITIA 396


>gi|77919942|ref|YP_357757.1| tyrosyl-tRNA synthetase [Pelobacter carbinolicus DSM 2380]
 gi|115305812|sp|Q3A220|SYY_PELCD RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|77546025|gb|ABA89587.1| tyrosyl-tRNA synthetase [Pelobacter carbinolicus DSM 2380]
          Length = 408

 Score =  393 bits (1010), Expect = e-107,   Method: Composition-based stats.
 Identities = 102/423 (24%), Positives = 182/423 (43%), Gaps = 33/423 (7%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLML 59
           M   +   + IL E           +L      G  +    G+D TA  LH GH   +  
Sbjct: 8   MAIIRRGAVEILVESEL------EAKLKKSVETGVPLKVKAGFDPTAPDLHVGHTVLIQK 61

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG 119
           L   Q  GH+   L+G  T +IGDP+ ++E+R+ +  +E+ +N E  K      +     
Sbjct: 62  LKQFQDLGHEVNFLIGDFTGMIGDPTGKNETRKALTREEVLKNAETYKQQVFKILDPERT 121

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
           K    ++ N +W+  +   DL+   G + +V RML  +    R   +Q ++  EF Y ++
Sbjct: 122 K----VVFNSSWMGQMSAADLIGLAGRY-TVARMLERDDFHKRFSGQQPIAIHEFLYPLV 176

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMG 238
           Q YD V L  +    +++GG+DQ  N++ G +L ++        LT PLL    G  KM 
Sbjct: 177 QGYDSVALKAD----VELGGTDQKFNLLVGRELQKQEGQVPQCVLTMPLLEGLDGVNKMS 232

Query: 239 KTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID-----RMAKLQGK 293
           K+L   I + +        +    +I D  ++ + + L+ + ++++         K  G 
Sbjct: 233 KSLGNYIGITEPAK---EVFGKVMSISDELMLRYYELLSDVDLAQLQLVRDGVEGKAGGA 289

Query: 294 EINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLL 353
              E+KK +A E+    + +  A +A    ++ F        +P + I   E    + + 
Sbjct: 290 HPMESKKSLARELVARFYDQAAALRAEEEFVQQFKQKEVPDDIPEVLIDAGE---PVWIC 346

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            L+  AG   S  EARR +K  A+K+    I++  L++        G + L  GK+    
Sbjct: 347 RLLTDAGLTASNGEARRLVKQGAVKLGGEKIADAGLEVAPA-----GELILQAGKRRFAR 401

Query: 414 CHL 416
              
Sbjct: 402 IKF 404


>gi|296162970|ref|ZP_06845747.1| tyrosyl-tRNA synthetase [Burkholderia sp. Ch1-1]
 gi|295886764|gb|EFG66605.1| tyrosyl-tRNA synthetase [Burkholderia sp. Ch1-1]
          Length = 416

 Score =  393 bits (1010), Expect = e-107,   Method: Composition-based stats.
 Identities = 96/412 (23%), Positives = 182/412 (44%), Gaps = 30/412 (7%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           +  L     I      +      +   +   +G D TA  +H GH   L  +  LQ  GH
Sbjct: 31  VDEL----LIEDEFAQKLAKSAATGKPLRIKLGLDPTAPDIHIGHTVVLNKMRQLQDLGH 86

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
             I L+G  TS+IGDPS R+ +R  +  ++I+ N +      +  +     +    +  N
Sbjct: 87  TVIFLIGDFTSLIGDPSGRNATRPPLTREQIESNAKTYFEQAALVLDRDKTE----IRYN 142

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             W   +    +++ + S ++V R+L  E    R +    +S  EF Y ++Q YD V L 
Sbjct: 143 SEWSMPLGADGMIK-LASRYTVARILEREDFTKRFQSGVPISIHEFLYPLMQGYDSVALN 201

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWL 247
            +    L++GG+DQ  N++ G +L ++    +   LT PLL    G  KM K+ +  I +
Sbjct: 202 AD----LELGGTDQKFNLLVGRELQKQYGQEQQCILTMPLLEGLDGVEKMSKSKNNYIGI 257

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATE 305
           +++   P + +    +I D  +  + + L+  PM EI   +     G+   + K ++  E
Sbjct: 258 SEK---PTDMFGKLMSISDVLMWRYFELLSFRPMEEIAGFKKETEAGRNPRDFKVMLGQE 314

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           I    H + +AE+A                +P ++++       + +  L+ +A    ST
Sbjct: 315 IVARFHSQADAERALEDF-NHRAKGGVPDDIPAVTLA----GAPLAIGQLLKQANLVPST 369

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           +EA R+++   +KI+ + +S++ L+I+       G   +  GK+      L 
Sbjct: 370 SEALRNIEQGGVKIDGATVSDKGLKIEA------GEYVVQVGKRRFSRVTLT 415


>gi|303325614|ref|ZP_07356057.1| tyrosine--tRNA ligase [Desulfovibrio sp. 3_1_syn3]
 gi|302863530|gb|EFL86461.1| tyrosine--tRNA ligase [Desulfovibrio sp. 3_1_syn3]
          Length = 398

 Score =  393 bits (1010), Expect = e-107,   Method: Composition-based stats.
 Identities = 98/411 (23%), Positives = 172/411 (41%), Gaps = 27/411 (6%)

Query: 12  LSERGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           L +RG + ++ +  EL    ++G  +   +G+D TA  LH GH   +  +   Q+ GH  
Sbjct: 10  LIKRG-VAELIDEGELRKKLARGVPLRVKVGFDPTAPDLHLGHTVVMHKMRHFQELGHTV 68

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           I L+G  T  IGDPS R E+R  +  +++  N E  K      +          +  N  
Sbjct: 69  IFLIGDFTGRIGDPSGRSETRPPLTEEQVLANAETYKKQVFKILD----PEKTQVEFNSR 124

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           WL  +     ++ + S ++V RM+  +    R + ++ +S  EF Y + Q +D V L  +
Sbjct: 125 WLSKLDATGFIK-LASSYTVARMMERDDFEKRFREQRPISIHEFLYPLCQGFDSVSLKTD 183

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNK 249
               ++MGG+DQ  N++ G +L           LT PLL    G  KM K+    I +++
Sbjct: 184 ----VEMGGTDQKFNLLVGRNLQTHYGQESQCILTMPLLEGTDGVRKMSKSYGNYIGIDE 239

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKIIATEI 306
               P   +     + D  +  + + L+   + EI    R           AK+ +A E+
Sbjct: 240 P---PAEIFGKVMGVSDELMWRYYELLSAKSLEEISALKRDVAEGRVHPKAAKEALAHEM 296

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
            +  H  ++A++A       F         P++S    E S     L     AG   S  
Sbjct: 297 VSRYHSGKDADEARQGFNAVFADGGVPADAPSLSCQYGEDSTPPAFLE---AAGLVKSRG 353

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           EA+R +K  A+ ++     +    +   D        +  GKK  +  ++C
Sbjct: 354 EAKRLIKEGALSVDGQRCDDALAPLPAGD------YVIKLGKKRFLKLNVC 398


>gi|302391198|ref|YP_003827018.1| tyrosyl-tRNA synthetase [Acetohalobium arabaticum DSM 5501]
 gi|302203275|gb|ADL11953.1| tyrosyl-tRNA synthetase [Acetohalobium arabaticum DSM 5501]
          Length = 410

 Score =  393 bits (1010), Expect = e-107,   Method: Composition-based stats.
 Identities = 104/420 (24%), Positives = 187/420 (44%), Gaps = 30/420 (7%)

Query: 5   KSDFLSILS--ERGFIHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQL 57
           +S     L   +RG + ++ +  EL+    +       +   +G D TA  +H GH   L
Sbjct: 4   ESGIEKQLQIIKRG-VTELISEDELEDKLKEAQKEDRPLKVKLGLDPTAPDIHLGHTVVL 62

Query: 58  MLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG 117
             L   Q  GH+ I L+G  T  IGDPS + ++R  +  +E+ EN +  +      +   
Sbjct: 63  QKLKQFQDLGHEVILLIGDFTGRIGDPSGKSKTRPQLTEEEVMENAKTYQEQIFKVLDPD 122

Query: 118 TGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYM 177
             +    ++ N  WL  + + D+L  + S ++V RML  E   +R +  QS+   EF Y 
Sbjct: 123 KTR----LVFNSEWLGEMDFADVL-NLSSKYTVARMLEREDFSNRYENNQSIGVHEFFYP 177

Query: 178 ILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TK 236
           ++Q YD V +    +  +++GG+DQ  N++ G  L +         L  PLL    G  K
Sbjct: 178 LMQGYDSVAI----EADVELGGTDQKFNLLVGRRLQKEYGQDPQVILMMPLLEGLDGEQK 233

Query: 237 MGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--- 293
           M K+L   I ++ +   P + +    +I D  +  + + LT + + E++ +         
Sbjct: 234 MSKSLGNYIGIDDD---PNDMYGKVMSIPDKLLGRYFELLTDVSLEELEEIKNGLSSGEL 290

Query: 294 EINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGL 352
              E KK +A  I    +    A+KAA      F      + +P + +S D +  G + +
Sbjct: 291 HPMETKKRLAETIVAKYYDETTAKKAAREFERVFKDGELPEDIPQVELSSDRLEDGELWI 350

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           + L+   G   S ++ARR +K  A+KI+        L ++++D      + +  GKK   
Sbjct: 351 VKLVAATGLVDSNSQARRMIKQGAVKIDGEKYDKMNLDLEVED-----GMIIQIGKKRFA 405


>gi|91785169|ref|YP_560375.1| tyrosyl-tRNA synthetase [Burkholderia xenovorans LB400]
 gi|91689123|gb|ABE32323.1| tyrosyl-tRNA synthetase [Burkholderia xenovorans LB400]
          Length = 416

 Score =  393 bits (1010), Expect = e-107,   Method: Composition-based stats.
 Identities = 96/412 (23%), Positives = 183/412 (44%), Gaps = 30/412 (7%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           +  L     I      +      +   +   +G D TA  +H GH   L  +  LQ  GH
Sbjct: 31  VDEL----LIEDEFAQKLAKSAATGKPLRIKLGLDPTAPDIHIGHTVVLNKMRQLQDLGH 86

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
             I L+G  TS+IGDPS R+ +R  +  ++I+ N +      +  +     +    +  N
Sbjct: 87  TVIFLIGDFTSLIGDPSGRNATRPPLTREQIESNAKTYFEQAALVLDRDKTE----IRYN 142

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             W   +    +++ + S ++V R+L  E    R +    +S  EF Y ++Q YD V L 
Sbjct: 143 SEWSMPLGADGMIK-LASRYTVARILEREDFTRRFQSGVPISIHEFLYPLMQGYDSVALN 201

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWL 247
            +    L++GG+DQ  N++ G +L ++    +   LT PLL    G  KM K+ +  I +
Sbjct: 202 AD----LELGGTDQKFNLLVGRELQKQYGQEQQCILTMPLLEGLDGVEKMSKSKNNYIGI 257

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATE 305
           +++   P + +    +I D  +  + + L+  PM EI   +     G+   + K ++  E
Sbjct: 258 SEK---PTDMFGKLMSISDVLMWRYFELLSFRPMEEIAGFKKETEAGRNPRDFKVMLGQE 314

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           I    H + +AE+A                +P ++++       + +  L+ +A  A ST
Sbjct: 315 IVARFHSQADAERALEDF-NHRAKGGVPDDIPAVTLA----GAPLAIGQLLKQANLAPST 369

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           +EA R+++   +KI+ + +S++ L+++       G   +  GK+      L 
Sbjct: 370 SEALRNIEQGGVKIDGATVSDKGLKVEA------GEYVVQVGKRRFARVTLT 415


>gi|170732003|ref|YP_001763950.1| tyrosyl-tRNA synthetase [Burkholderia cenocepacia MC0-3]
 gi|169815245|gb|ACA89828.1| tyrosyl-tRNA synthetase [Burkholderia cenocepacia MC0-3]
          Length = 413

 Score =  393 bits (1010), Expect = e-107,   Method: Composition-based stats.
 Identities = 96/416 (23%), Positives = 187/416 (44%), Gaps = 31/416 (7%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           K     +L E  F  +++         +   +   +G D TA  +H GH   L  +  LQ
Sbjct: 25  KRGVDELLIEEEFAQKLA-----RSAATGTPLRIKLGLDPTAPDIHIGHTVVLNKMRQLQ 79

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GH  I L+G  TS+IGDPS R+ +R  +  ++I+ N +      +  +     +    
Sbjct: 80  DLGHTVIFLIGDFTSLIGDPSGRNATRPPLTREQIESNAKTYFEQAALVLDREKTE---- 135

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           +  N  W   +    +++ + S ++V R+L  E    R +    +S  EF Y ++Q YD 
Sbjct: 136 IRYNSEWSMPLGADGMIK-LASRYTVARILEREDFTKRFQGGVPISIHEFLYPLMQGYDS 194

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSG 243
           V L  +    L++GG+DQ  N++ G +L ++    +   LT PLL    G  KM K+   
Sbjct: 195 VALNAD----LELGGTDQKFNLLVGRELQKQYGQEQQCILTMPLLEGLDGVEKMSKSKGN 250

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKI 301
            + ++++   P + +    +I D  +  + + L+   + EI   +     G+   + K +
Sbjct: 251 YVGISEK---PTDMFGKLMSISDTLMWRYFELLSFRSLDEIAGFKREAEGGRNPRDFKVL 307

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGF 361
           +A EI    H + +AE+A                +P+++++       + +  L+ +AG 
Sbjct: 308 LAQEIVARFHSQPDAERALDDF-NHRAKGGVPDDIPSVTLA----GAPLAIGQLLKQAGL 362

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
             ST+EA R++    +KI+ + +S++ L+++  +F       +  GK+      L 
Sbjct: 363 VPSTSEALRNIDQGGVKIDGATVSDKGLKVEAGEF------VVQVGKRRFARVTLT 412


>gi|330963950|gb|EGH64210.1| tyrosyl-tRNA synthetase [Pseudomonas syringae pv. actinidiae str.
           M302091]
          Length = 399

 Score =  393 bits (1009), Expect = e-107,   Method: Composition-based stats.
 Identities = 104/409 (25%), Positives = 174/409 (42%), Gaps = 24/409 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG    +     ++ L     +    G+D TA  LH GH   +  L   Q  GH+ I
Sbjct: 10  LIKRGADELLVEAELVEKLKRGQPLRIKAGFDPTAPDLHLGHTVLINKLRQFQDLGHQVI 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T +IGDPS +  +R  +  +++ +  E  K      +     +    +  N TW
Sbjct: 70  FLIGDFTGMIGDPSGKSATRPPLTREQVLDYAETYKSQVFKILDPAKTE----VAFNSTW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +  +   D +R + S ++V RML  +    R K  QS++  EF Y ++Q YD V L  + 
Sbjct: 126 MDKLSPADFIR-LSSQYTVARMLERDDFDKRYKSNQSIAIHEFLYPLVQGYDSVALKAD- 183

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G +L           LT PLL    G  KM K+L   + + + 
Sbjct: 184 ---VELGGTDQKFNLLMGRELQRAYGQEPQCILTMPLLEGLDGVKKMSKSLGNYVGIQE- 239

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEITT 308
             +P   +    +I D+ +  + + L+   M EI+  R     G    + K  +A E+  
Sbjct: 240 --APGIMYGKLVSIPDSLMWRYFELLSFRSMEEINGLRADCEAGANPRDIKIKLAEELVA 297

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
             HG E A  A  +A            +P IS++  E    M +  ++ KAG   +   A
Sbjct: 298 RFHGEEAAATAHRSAGNRMKEGELPDDLPEISVAAIE---DMPISAVLNKAGLVKNAAVA 354

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           R  L S  ++I+  ++ +    +KL             GKK      L 
Sbjct: 355 RDLLASGGVRIDGEVV-DRSFIVKL-----GATHVCQAGKKAFGRITLV 397


>gi|260771826|ref|ZP_05880744.1| tyrosyl-tRNA synthetase 2 (Tyrosine--tRNA ligase 2) (TyrRS 2)
           [Vibrio metschnikovii CIP 69.14]
 gi|260613118|gb|EEX38319.1| tyrosyl-tRNA synthetase 2 (Tyrosine--tRNA ligase 2) (TyrRS 2)
           [Vibrio metschnikovii CIP 69.14]
          Length = 396

 Score =  393 bits (1009), Expect = e-107,   Method: Composition-based stats.
 Identities = 96/419 (22%), Positives = 177/419 (42%), Gaps = 28/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M + ++    I  +RG    I     +  L     +   +G D TA  +H GH   L  L
Sbjct: 1   MASIEAALAEI--KRGVEELIPEEELIAKLKEGRPLRIKLGADPTAPDIHLGHTVILNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GH    L+G  T ++GDP+ ++ +R  +  +++  N E  K      +     K
Sbjct: 59  RTFQDLGHDVTFLIGDFTGMVGDPTGKNTTRPPLTREDVLRNAETYKQQVFKILDPAKTK 118

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N  WL  +    ++R + +  +V RML  +  + R    Q ++  EF Y +LQ
Sbjct: 119 ----IQFNSEWLSELGAEGMIR-LAANQTVARMLERDDFKKRYTGGQPIAIHEFMYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGK 239
            YD V +    +  +++GG+DQ  N++ G +L +         L  PLL    G  KM K
Sbjct: 174 GYDSVAM----ETDVELGGTDQKFNLLMGRELQKSHGQKPQVVLMMPLLVGLDGEKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINE 297
           +    I +++   +P   +    +I D  + S+ + L+  P++E+++       G    +
Sbjct: 230 SAHNYIGVSE---APSEMFGKIMSISDDLMWSYYELLSFRPLAEVEQFKADVANGANPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A EI    H + +A+ A    +  F        MP  +      ++G+ +  L+ 
Sbjct: 287 VKILLAKEIIARFHSQADADAAEQEFINRFQKGALPDEMPEFT-----FAQGIAIANLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +AG   ST++A R +K  A K +   + + K    +      G      GK+      +
Sbjct: 342 EAGLVGSTSDAMRMVKQGAAKQDGEKLDDAKCIPAV------GTYVYQVGKRKFARVTI 394


>gi|26333055|dbj|BAC30245.1| unnamed protein product [Mus musculus]
          Length = 403

 Score =  393 bits (1009), Expect = e-107,   Method: Composition-based stats.
 Identities = 129/399 (32%), Positives = 201/399 (50%), Gaps = 20/399 (5%)

Query: 37  TAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRS 96
           T Y G+D T  SLH GHL  L+ LF  Q+ GH  I+L+GG T+++GDPS R + R  + +
Sbjct: 1   TVYCGFDPTGDSLHVGHLLTLLGLFHFQRAGHNVIALVGGSTALLGDPSGRTKGREALSA 60

Query: 97  QEIQENI-------EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFS 149
           + ++ N        E +    +     G       +L+N  W      +D L  +G  F 
Sbjct: 61  ECVRANAHALRRGLEALAANHARLFADGRPWGSFTVLDNAAWFQEQHLVDFLATVGGHFR 120

Query: 150 VNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICG 209
           +  +LS  SV+SRLK  + +S  EF Y +LQAYDF  L ++Y CR+Q+GGSDQ GNI+ G
Sbjct: 121 MGTLLSRLSVQSRLKSPEGMSLAEFFYQVLQAYDFYYLFQHYGCRVQLGGSDQLGNIMSG 180

Query: 210 IDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADV 269
            +   +L    +F +T PL+T+ +G K+GK+   A+WLN+E TSP+  +Q++    D  V
Sbjct: 181 YEFIHKLTGEDVFGITVPLITSTTGAKLGKSAGNAVWLNREKTSPFELYQFFVRQQDDSV 240

Query: 270 VSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIATEITTMVHGREEAEKAATAAMECF 327
             + K  T LP+ EID + +L  KE     A+K +A E+T +VHG+E  + A       +
Sbjct: 241 ERYLKLFTFLPLPEIDHIMQLHVKEPEKRVAQKRLAAEVTKLVHGQEGLDSAKRCTQALY 300

Query: 328 DMSIHSQHM----------PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAI 377
             SI +  +             S S+  +  G  ++    KA          R +    +
Sbjct: 301 HSSIEALEVMSDQELKELFKEASFSELVLDPGTSVIDTCRKANAIPDGPRGYRMITEGGV 360

Query: 378 KINNSIISNEKLQIKL-QDFDSTGNIKLSFGKKNHIICH 415
            IN+  ++N +  + + Q     G   L  GK+N  I  
Sbjct: 361 SINHRQVTNPESVLVIGQHILKNGLSLLKIGKRNFYIIK 399


>gi|330898958|gb|EGH30377.1| tyrosyl-tRNA synthetase [Pseudomonas syringae pv. japonica str.
           M301072PT]
          Length = 403

 Score =  393 bits (1009), Expect = e-107,   Method: Composition-based stats.
 Identities = 104/409 (25%), Positives = 173/409 (42%), Gaps = 24/409 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG    +     ++ L     +    G+D TA  LH GH   +  L   Q  GH+ I
Sbjct: 10  LIKRGADELLVEAELVEKLKRGQPLRIKAGFDPTAPDLHLGHTVLINKLRQFQDLGHQII 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T +IGDPS +  +R  +  +++ +  E  K      +     +    +  N TW
Sbjct: 70  FLIGDFTGMIGDPSGKSATRPPLTREQVLDYAETYKSQVFKILDPAKTE----VAFNSTW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +  +   D +R + S ++V RML  +    R K  QS++  EF Y ++Q YD V L  + 
Sbjct: 126 MDQLSPADFIR-LSSQYTVARMLERDDFDKRYKSNQSIAIHEFLYPLVQGYDSVALKAD- 183

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G +L           LT PLL    G  KM K+L   + + + 
Sbjct: 184 ---VELGGTDQKFNLLMGRELQRAYGQEPQCILTMPLLEGLDGVKKMSKSLGNYVGIQE- 239

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEITT 308
             +P   +    +I D+ +  + + L+   M EID  +     G    + K  +A E+  
Sbjct: 240 --APGIMYSKLVSIPDSLMWRYFELLSFRSMEEIDGLKADCEAGANPRDIKIKLAEELVA 297

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
             HG E A  A  +A            +P IS++  E    M +  ++ KAG   +   A
Sbjct: 298 RFHGEEAAANAHRSAGNRMKEGELPDDLPEISVAAAE---DMPISAVLNKAGLVKNAAVA 354

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           R  L S  ++I+  ++ +     KL             GKK      L 
Sbjct: 355 RDLLASGGVRIDGEVV-DRGFVFKL-----GATHVCQAGKKAFGRVTLV 397


>gi|78486288|ref|YP_392213.1| tyrosyl-tRNA synthetase [Thiomicrospira crunogena XCL-2]
 gi|115305828|sp|Q31E84|SYY_THICR RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|78364574|gb|ABB42539.1| tyrosyl-tRNA synthetase [Thiomicrospira crunogena XCL-2]
          Length = 398

 Score =  393 bits (1009), Expect = e-107,   Method: Composition-based stats.
 Identities = 92/407 (22%), Positives = 174/407 (42%), Gaps = 25/407 (6%)

Query: 14  ERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           +RG    +     ++ L     +    G+D TA  LH GH   +  L   Q  GH+ + L
Sbjct: 13  QRGAEEILVEKELIEKLKKGKPLKIKAGFDPTAPDLHLGHTVLINKLRQFQDLGHEILFL 72

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
           +G  T++IGDP+ +  +R  +  +++ +N E  K      +     K    ++ N  W+ 
Sbjct: 73  IGDFTAMIGDPTGKSATRPPLSEEDVLKNAETYKEQVFKILDPAKTK----VVFNSEWMS 128

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDC 193
            +   D+++  G+  +V RML       R +    ++  EF Y ++Q YD V L  +   
Sbjct: 129 KLSAADMIKLAGTT-TVARMLERNDFGERYQSNTPIAIHEFLYPLVQGYDSVALDSD--- 184

Query: 194 RLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMT 252
            +++GG+DQ  N++ G  L +         LT P+L    G  KM K+L+  I +     
Sbjct: 185 -IELGGTDQKFNLLMGRTLQQHYGKEAQCTLTMPILEGLDGVQKMSKSLNNYIGI---KD 240

Query: 253 SPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEITTMV 310
           +P + +    ++ D  +  + + L+   +  I   + A   G+     K  +A E+    
Sbjct: 241 APNDMFGKVMSVSDELMWRYFELLSFESLETIAGYKDAVANGENPRNIKIKLALELIERF 300

Query: 311 HGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARR 370
           H +E AE A       F  +     MP  +      +  M L  L+ +AG  +ST++  R
Sbjct: 301 HDKESAEAALKDFETRFSKNAIPDEMPEFT-----FNEVMPLANLLKEAGLVSSTSDGHR 355

Query: 371 HLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            +K  A+K+N   +++ +  ++  +           GK+      + 
Sbjct: 356 MVKQGAVKLNGEKVTDSRAPVENCEQQ-----VYQVGKRKFARITVA 397


>gi|163854917|ref|YP_001629215.1| tyrosyl-tRNA synthetase [Bordetella petrii DSM 12804]
 gi|163258645|emb|CAP40944.1| tyrS [Bordetella petrii]
          Length = 409

 Score =  393 bits (1009), Expect = e-107,   Method: Composition-based stats.
 Identities = 104/411 (25%), Positives = 180/411 (43%), Gaps = 29/411 (7%)

Query: 15  RGFIHQISNPRELDILCSQG----VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           RG    +        L +       +   +G D TA  +H GH   L  +  LQ  GH  
Sbjct: 21  RGCDELLVESEFARKLANSRATGVPLRIKLGLDPTAPDIHLGHTVVLNKMRQLQDLGHNV 80

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           I L+G  TS+IGDPS R+ +R  +  ++I+ N +      S  +     +    +  N  
Sbjct: 81  IFLIGDFTSMIGDPSGRNSTRPPLTREQIEANAKTYYAQASLVLDPARTE----IRYNSE 136

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           W   +    L+ ++ S ++V RM+  E    R K    ++  EF Y ++Q YD V L  +
Sbjct: 137 WSDPLGARGLI-QLASRYTVARMMEREDFTKRFKGGVPIAVHEFLYPLMQGYDSVALKSD 195

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNK 249
               L++GG+DQ  N++ G +L +         LT PLL    G  KM K+    I +++
Sbjct: 196 ----LELGGTDQKFNLLVGRELQKEYGQAPQCVLTMPLLEGTDGVEKMSKSKGNYIGISE 251

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATEIT 307
              SP + +    +I D  +  + + L+   + +I  +      G    +AK  +A EI 
Sbjct: 252 ---SPDSMFGKLMSISDTLMWRYFELLSFRSLEDIAALKAGIEAGANPRDAKVALAQEIV 308

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
              H  + AE A  A    F        MP I+I+       +G+L ++ +AG   S  E
Sbjct: 309 ARFHSAQAAEAALAAFQARFRDGAMPDDMPEINIA----GAPLGILKVLREAGLVASGAE 364

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLCG 418
           A+R+++   ++++   I ++ LQ++       G   +  GK+     +L G
Sbjct: 365 AQRNVEQGGVRVDGDRIEDKSLQLQA------GTYVVQVGKRKFARVNLAG 409


>gi|319776501|ref|YP_004138989.1| tyrosyl-tRNA synthetase [Haemophilus influenzae F3047]
 gi|317451092|emb|CBY87325.1| tyrosyl-tRNA synthetase [Haemophilus influenzae F3047]
          Length = 395

 Score =  393 bits (1009), Expect = e-107,   Method: Composition-based stats.
 Identities = 109/412 (26%), Positives = 182/412 (44%), Gaps = 27/412 (6%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L+ L  RG    +S    ++ L     +   +G D TA  +H GH   L  L   Q+ G
Sbjct: 7   VLAELK-RGTDEILSEADLIEKLKENRPLKVKLGADPTAPDIHLGHTVVLNKLRQFQQLG 65

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+   L+G  T ++GDPS ++ +R  +  +++  N E  K      +     K    ++ 
Sbjct: 66  HEVYFLIGDFTGMVGDPSGKNATRPPLSREDVLRNAETYKEQIYKILDPQKTK----IVF 121

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  +    ++R + S ++V RML  +  + R    Q ++  EF Y +LQ YD V L
Sbjct: 122 NSEWLSKLGTEGMIR-LTSNYTVARMLERDDFKKRFGNNQPIAIHEFIYPLLQGYDSVAL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIW 246
             +    +++GG+DQ  N++ G +L +        A+T PLL    G  KM K+L   I 
Sbjct: 181 DAD----VELGGTDQKFNLLVGRELQKSAGKKPQVAITLPLLVGLDGEKKMSKSLGNYIG 236

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIAT 304
           + +   +P + +    +I D  +  +   L+  P+SEI   +    +GK   + K ++A 
Sbjct: 237 VTE---APSDMFGKVMSISDELMWDWYNLLSFRPLSEIAQLKSEVEKGKNPRDVKILLAK 293

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E+    H  E A  A    +  F        MP  + S +     +GL TL+ +AG   S
Sbjct: 294 ELIARFHNEEAANAAEQEFINRFQKGAMPDEMPEFTFSGE-----IGLATLLKEAGLVPS 348

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           T+EA R  +   +KIN   ++N K      D    G      GK+      +
Sbjct: 349 TSEAIRSAQQGGVKINGEKVNNVK------DNAPKGTNVYQVGKRKFARVTV 394


>gi|172059664|ref|YP_001807316.1| tyrosyl-tRNA synthetase [Burkholderia ambifaria MC40-6]
 gi|171992181|gb|ACB63100.1| tyrosyl-tRNA synthetase [Burkholderia ambifaria MC40-6]
          Length = 413

 Score =  392 bits (1008), Expect = e-107,   Method: Composition-based stats.
 Identities = 96/416 (23%), Positives = 188/416 (45%), Gaps = 31/416 (7%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           K     +L E  F  +++         +   +   +G D TA  +H GH   L  +  LQ
Sbjct: 25  KRGVDELLIEEEFAQKLA-----RSAATGTPLRIKLGLDPTAPDIHIGHTVVLNKMRQLQ 79

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GH  I L+G  TS+IGDPS R+ +R  +  ++I+ N +      +  +     +    
Sbjct: 80  DLGHTVIFLIGDFTSLIGDPSGRNATRPPLTREQIESNAKTYFEQAALVLDREKTE---- 135

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           +  N  W   +    +++ + S ++V R+L  E    R +    +S  EF Y ++Q YD 
Sbjct: 136 IRYNSEWSMPLGADGMIK-LASRYTVARILEREDFTKRFQGGVPISIHEFLYPLMQGYDS 194

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSG 243
           V L  +    L++GG+DQ  N++ G +L ++    +   LT PLL    G  KM K+   
Sbjct: 195 VALNAD----LELGGTDQKFNLLVGRELQKQYGQEQQCILTMPLLEGLDGVEKMSKSKGN 250

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKI 301
            + ++++   P + +    +I D  +  + + L+   + EI   +     G+   + K +
Sbjct: 251 YVGISEK---PTDMFGKLMSISDTLMWRYFELLSFRGLDEIAGFKRDAEGGRNPRDFKVL 307

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGF 361
           +A EI    H + +AE+A                +P+++++       + +  L+ +AG 
Sbjct: 308 LAQEIVARFHSQADAERALEDF-NHRAKGGVPDDIPSVTLA----GAPLAIGQLLKQAGL 362

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
             ST+EA R+++   +KI+ + +S++ L+++  +F       +  GK+      L 
Sbjct: 363 VPSTSEALRNIEQGGVKIDGATVSDKGLKVEAGEF------VVQVGKRRFARVTLS 412


>gi|330447447|ref|ZP_08311096.1| tyrosyl-tRNA synthetase [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
 gi|328491638|dbj|GAA05593.1| tyrosyl-tRNA synthetase [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
          Length = 395

 Score =  392 bits (1008), Expect = e-107,   Method: Composition-based stats.
 Identities = 106/419 (25%), Positives = 180/419 (42%), Gaps = 28/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M   +   + I  +RG    I     ++ L     +   +G D TA  +H GH   L  L
Sbjct: 1   MANIEQALVEI--KRGVDELIPEAELIEKLKENRPLRIKLGADPTAPDIHLGHTVILNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+   L+G  T ++GDP+ ++ +R  +  +++  N E  K      +     K
Sbjct: 59  RTFQELGHEVTFLIGDFTGMVGDPTGKNVTRPPLTREDVLRNAETYKEQVFKILDPAKTK 118

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N TWL  +    ++R + S  +V RML  +  + R    + ++  EF Y +LQ
Sbjct: 119 ----IAFNSTWLSELGAEGMIR-LASNQTVARMLERDDFKKRYTENRPIAIHEFMYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGK 239
            YD V +    +  +++GG+DQ  N++ G +L +         LT PLL    G  KM K
Sbjct: 174 GYDSVAM----ETDVELGGTDQKFNLLMGRELQKSHGQKPQVVLTMPLLVGLDGVKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINE 297
           + +  I +     +P   +    +I D  + S+ + L+  PMSEI++       GK   +
Sbjct: 230 SANNYIGI---ADAPSEMFGKIMSISDDLMWSYFELLSFRPMSEIEQFKADVAAGKNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A EI    H  EEAE A    +  F        MP       E   G+ +  L+ 
Sbjct: 287 VKFLLAKEIIARFHSEEEAEAALQEFISRFQKGNLPDEMPEF-----EFEAGLPIANLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +A    ST++A R ++  A+K +   + + KL          GN     GK+      +
Sbjct: 342 EAALVNSTSDAMRMIRQGAVKQDGEKVEDTKLVPAA------GNYVFQVGKRKFARVTI 394


>gi|88858216|ref|ZP_01132858.1| Tyrosyl-tRNA synthetase II [Pseudoalteromonas tunicata D2]
 gi|88819833|gb|EAR29646.1| Tyrosyl-tRNA synthetase II [Pseudoalteromonas tunicata D2]
          Length = 400

 Score =  392 bits (1008), Expect = e-107,   Method: Composition-based stats.
 Identities = 98/421 (23%), Positives = 178/421 (42%), Gaps = 25/421 (5%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M   ++    I  +RG    +     ++ L S   +    G+D TA  LH GH   +  +
Sbjct: 1   MADLQAALAEI--KRGAEEILIEDELIEKLKSGKKLKIKAGFDPTAPDLHLGHTVLINKM 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GH+ I L+G  T +IGDP+ ++ +R+ +  +++  N E  K      +      
Sbjct: 59  KTFQDLGHEVIFLIGDFTGMIGDPTGKNVTRKPLTREDVLANAETYKEQVFKILDPAKT- 117

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N TW+  +    +++ + S  +V RML  +  + R    Q ++  EF Y ++Q
Sbjct: 118 ---TVAFNSTWMEKLGAAGMIK-LASNQTVARMLERDDFKKRYAGGQPIAIHEFLYPLVQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGK 239
            +D V L    +  +++GG+DQ  N++ G +L +         L  PLL    G  KM K
Sbjct: 174 GWDSVAL----EADVELGGTDQRFNLLMGRELQKVEGQKPQTVLMMPLLEGTDGVQKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINE 297
           +L   I +     SP   +    +I D  +  +   L+ L + +I  +      G    +
Sbjct: 230 SLGNYIGIT---DSPTEMFGKIMSISDDLMWRYFDLLSALSIDQIAALKADVTAGTNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K  +A E+    H   +AE A    +  F        +P +++  +     + +  L+ 
Sbjct: 287 IKINLAREMIARFHSEADAEAAYQDFINRFQKKALPDDIPEVTVQIE--GDVISIANLLK 344

Query: 358 KAGFATSTNEARRHLKSNAIKINN-SIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +A    ST+EA R +K  A+K+N    IS+ KL+I+              GK+      +
Sbjct: 345 EADLVASTSEAMRMIKQGAVKLNGEEKISDSKLEIQ-----KGSEAIYQVGKRKFAKVIV 399

Query: 417 C 417
            
Sbjct: 400 A 400


>gi|268316596|ref|YP_003290315.1| tyrosyl-tRNA synthetase [Rhodothermus marinus DSM 4252]
 gi|262334130|gb|ACY47927.1| tyrosyl-tRNA synthetase [Rhodothermus marinus DSM 4252]
          Length = 413

 Score =  392 bits (1008), Expect = e-107,   Method: Composition-based stats.
 Identities = 104/422 (24%), Positives = 183/422 (43%), Gaps = 26/422 (6%)

Query: 1   MPAFKSDFLSILSE--RGFIHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGH 53
           MP+F       L +  RG +  I    EL     +       +   +G D +   LH GH
Sbjct: 1   MPSF-PPVEEQLRQIRRGVVE-IIPEEELVQKLERSYRTGKPLIVKLGCDPSRPDLHLGH 58

Query: 54  LTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSF 113
              L  L   Q  GH+ + ++G  T++IGDP+ R ++R  +  +E + N        +  
Sbjct: 59  AVVLRKLRQFQDLGHQAVLIIGDFTAMIGDPTGRSKTRPALTLEETRANGRTYFEQAAKI 118

Query: 114 IKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLE 173
           +         ++  N  WL  + + D++ E+ + ++V RML  +    R K  + +   E
Sbjct: 119 LD----PERTIIRYNSEWLGRMTFRDVI-ELAAKYTVARMLERDDFEKRYKAGEPIGIHE 173

Query: 174 FNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTAS 233
           F Y + QA D VE+  +    +++GG+DQ  N++ G D+ +         L  P+L    
Sbjct: 174 FLYPLAQAMDSVEIQAD----VELGGTDQRFNLLVGRDIQQAYGQEPQVCLLMPILEGTD 229

Query: 234 GT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG 292
           G  KM K+L   I + +    P   +    +I D  +  + +  T +P  E+    +   
Sbjct: 230 GVEKMSKSLDNYIGITEP---PEEMYGKVLSIPDHLIYRYFELATDIPTEELPAKKEFAE 286

Query: 293 KEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGL 352
           ++   AK  +A  I  M HG E A +A              + +     + DE +R + L
Sbjct: 287 RDPRNAKHELAWTIVRMYHGEEAANRAREHFERTIIRGEAPEDLEPFRPTPDEGTR-IAL 345

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           + LIV+A  A+S +EARR ++  A+ I+   +++E L+I   D        L  GK+   
Sbjct: 346 VNLIVQAELASSKSEARRLIRQGAVSIDGERVTDEHLEI---DLAQRAPFVLKVGKRRFA 402

Query: 413 IC 414
             
Sbjct: 403 RV 404


>gi|197294590|ref|YP_001799131.1| Tyrosyl-tRNA synthetase [Candidatus Phytoplasma australiense]
 gi|254783622|sp|B1VAA7|SYY_PHYAS RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|171853917|emb|CAM11880.1| Tyrosyl-tRNA synthetase [Candidatus Phytoplasma australiense]
          Length = 415

 Score =  392 bits (1008), Expect = e-107,   Method: Composition-based stats.
 Identities = 140/419 (33%), Positives = 213/419 (50%), Gaps = 17/419 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           F   L  R  I   S+ +EL  L     +  Y G+D T+ SL  GHL QL ++  L+K G
Sbjct: 3   FYEELKWRNLIKDSSDEKELKNLLDCKKIKFYCGFDPTSDSLTVGHLVQLTMMSLLEKQG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H P  L+GG T +IGDP    E R+++  +   +N + ++      +     +     LN
Sbjct: 63  HSPFILVGGATGLIGDPK-ETEERKLLSLETSLQNAKSLETQLKKIL----FQKKITFLN 117

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W   +  I  LR+ G  F++N ML+ ++V  RL     +SF EF YMILQ+ DF  L
Sbjct: 118 NYEWFSQLDIITFLRKYGKLFNINYMLNKQTVAKRLSS--GISFTEFTYMILQSLDFHHL 175

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASGTKMGKTLSGAIW 246
            KNY  +LQ+GGSDQWGNI  G++L  +L+ T   F L++PLL  A+GTK GK+    +W
Sbjct: 176 YKNYGVQLQLGGSDQWGNITSGLELIRKLETTSHAFGLSTPLLLNANGTKFGKSEQDVLW 235

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIAT 304
           L+ + TSPY  +QY+ N+ D +VV+  K+LT +P  EI  + K  LQ  +   A+K +A 
Sbjct: 236 LDPQKTSPYKIYQYFLNLADEEVVNCLKQLTLIPKEEILELEKATLQTPQKRLAQKALAN 295

Query: 305 EITTMVHGREEAEKAATAAMECF--DMSIHSQHMPTISISKDEVSRGMGLL-----TLIV 357
            I  +++ ++  ++        F        Q      ++K   S    L+       +V
Sbjct: 296 NIVNLIYSQKVLQECHKTNEVLFLNKKKESFQEADFTLLNKTLFSYETSLVSIPLSEALV 355

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           K    TS  EAR  ++  +I+I N  I N    I  ++      + L  GKKN+ +  L
Sbjct: 356 KTQLTTSKREAREFIQRGSIQIFNEKIKNPDYLIDKKNTLFNKYVLLKKGKKNNSLIIL 414


>gi|330961004|gb|EGH61264.1| tyrosyl-tRNA synthetase [Pseudomonas syringae pv. maculicola str.
           ES4326]
          Length = 399

 Score =  392 bits (1008), Expect = e-107,   Method: Composition-based stats.
 Identities = 103/409 (25%), Positives = 173/409 (42%), Gaps = 24/409 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG    +     ++ L     +    G+D TA  LH GH   +  L   Q  GH+ I
Sbjct: 10  LIKRGADELLVEAELVEKLKRGQPLRIKAGFDPTAPDLHLGHTVLINKLRQFQDLGHQVI 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T +IGDPS +  +R  +  +++ +  E  K      +     +    +  N TW
Sbjct: 70  FLIGDFTGMIGDPSGKSATRPPLTREQVLDYAETYKSQVFKILDPAKTE----VAFNSTW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +  +   D +R + S ++V RML  +    R K  QS++  EF Y ++Q YD V L  + 
Sbjct: 126 MDKLSPADFIR-LSSQYTVARMLERDDFDKRYKSNQSIAIHEFLYPLVQGYDSVALKAD- 183

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G +L           LT PLL    G  KM K+L   + + + 
Sbjct: 184 ---VELGGTDQKFNLLMGRELQRSYGQEPQCILTMPLLEGLDGVKKMSKSLGNYVGIQE- 239

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEITT 308
             +P   +    +I D+ +  + + L+   M EI+  +     G    + K  +A E+  
Sbjct: 240 --APGIMYSKLVSIPDSLMWRYFELLSFRSMEEINGFKADCEAGANPRDIKIKLAEELVA 297

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
             HG E A  A  +A            +P IS++  E    M +  ++ KAG   +   A
Sbjct: 298 RFHGEEAAANAHRSAGNRMKEGELPADLPEISVTASE---DMPISAVLNKAGLVKNAAVA 354

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           R  L S  ++I+  ++ +     KL             GKK      L 
Sbjct: 355 RDLLASGGVRIDGEVV-DRGFVFKL-----GATHVCQAGKKAFGRVTLV 397


>gi|163781672|ref|ZP_02176672.1| tyrosyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
 gi|159882892|gb|EDP76396.1| tyrosyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
          Length = 399

 Score =  392 bits (1008), Expect = e-107,   Method: Composition-based stats.
 Identities = 102/383 (26%), Positives = 171/383 (44%), Gaps = 24/383 (6%)

Query: 34  GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRM 93
             +    G+D TA  LH GH+  L  L   Q+ GH+   ++G  T++IGDP+ R E+R  
Sbjct: 38  RPLRVKAGFDPTAPDLHLGHVVLLQKLRQFQQLGHEVYFIIGDFTAMIGDPTGRSETRPP 97

Query: 94  MRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRM 153
           +  +++ EN +  +      +          ++ N TWL  +    L++ + + ++V RM
Sbjct: 98  LTKEQVLENAKTYEHQVFKVLD----PEKTTIVFNSTWLQELGTEGLIK-LSAKYTVARM 152

Query: 154 LSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLG 213
           L  +    R K    +   EF Y +LQAYD V +  +    +++GG+DQ  N++ G D+ 
Sbjct: 153 LERDDFSKRFKEGIPIYIHEFLYPLLQAYDSVAIKAD----VELGGTDQKFNLLIGRDIQ 208

Query: 214 ERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSF 272
                     +T PLL    G  KM K+    + + ++   P   +    +I D  +  +
Sbjct: 209 REYGQEPQVCITMPLLVGLDGVRKMSKSYGNYVGITED---PKTMFGKLMSISDELMWDY 265

Query: 273 AKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIH 332
              LT     EI++  K       EAKK +A  I +  H  EEA+KA       +     
Sbjct: 266 YLLLTDYTEEEIEKFRKE--WHPMEAKKHLAELIVSRFHSEEEAKKAREWFESTYSKRKF 323

Query: 333 SQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
            +  P + +  +E    M  L LI + G  +S NE RR ++   +K+N   +S+    IK
Sbjct: 324 PEDAPLVELPHEE----MTALDLITELGAVSSKNEGRRVIQGGGLKVNFEKVSDPYQSIK 379

Query: 393 LQDFDSTGNIKLSFGKKNHIICH 415
           L      G +K+  GKK      
Sbjct: 380 L-----DGELKVQVGKKKFYRVR 397


>gi|253575745|ref|ZP_04853080.1| tyrosyl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str. D14]
 gi|251844788|gb|EES72801.1| tyrosyl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str. D14]
          Length = 417

 Score =  392 bits (1008), Expect = e-107,   Method: Composition-based stats.
 Identities = 97/412 (23%), Positives = 182/412 (44%), Gaps = 28/412 (6%)

Query: 15  RGFIHQISNPRELDILC-----SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
           RG +  I    EL         +   +   +G D +A  +H GH   +  L   Q+ GH+
Sbjct: 23  RGVVE-IVPEDELKQKVIQSVVTGKPLKVKLGLDPSAPDIHIGHTVVMQKLRQFQELGHQ 81

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
              ++G  T  IGDP+ + E+R+ +  +++Q N E  +      +     + +     N 
Sbjct: 82  VQLIIGDFTGRIGDPTGKSETRKQLTEEDVQRNAETYRQQIFKILDPEKTQVN----FNS 137

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
            WL  + + D+++ + +  +V RML  +    R    Q +S  EF Y ++Q  D V L  
Sbjct: 138 EWLAPMTFADVVK-LSAKVTVARMLERDDFTKRYTSGQPISIHEFFYPLMQGMDSVALES 196

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLN 248
           +    +++GG+DQ  N++ G  L +        A+ +P++    G  KM K+L   I ++
Sbjct: 197 D----IELGGTDQKFNLLMGRTLQKEYGKDTQVAIMTPIIEGLDGVQKMSKSLGNYIGID 252

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID---RMAKLQGKEINEAKKIIATE 305
           +   +P   +    ++ D  +  + + +T L + E+       K       +AK  +A  
Sbjct: 253 E---APNEIYGKAMSVPDELMTKYFELVTDLSLEELAELTEGLKSGAVHPRDAKMKLAHT 309

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATS 364
           +  M HG+E A+ A    +  F      + +    I   E+  G + L+ L+   GFA S
Sbjct: 310 LVRMYHGQEAADAAQEHFVTVFQQRALPEDIEEKEIPAAELDNGKIRLIKLLTLLGFAAS 369

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             EARR ++  A+K+N   IS+   +++     + G I +  GK+      +
Sbjct: 370 NGEARRSIQQGAVKLNEEKISDPNAEVE----LAGGEI-IQVGKRKFAKLSV 416


>gi|330815554|ref|YP_004359259.1| Tyrosyl-tRNA synthetase [Burkholderia gladioli BSR3]
 gi|327367947|gb|AEA59303.1| Tyrosyl-tRNA synthetase [Burkholderia gladioli BSR3]
          Length = 413

 Score =  392 bits (1007), Expect = e-107,   Method: Composition-based stats.
 Identities = 99/412 (24%), Positives = 186/412 (45%), Gaps = 30/412 (7%)

Query: 12  LSERG----FIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           +++RG     I      +      S   +   +G D TA  +H GH   L  +  LQ  G
Sbjct: 23  ITKRGVDELLIEDEFAQKLARSEASGTPLRIKLGLDPTAPDIHIGHTVVLNKMRQLQDLG 82

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H  I L+G  TS+IGDPS R+ +R  +  ++I+ N +      +  +     +    +  
Sbjct: 83  HTVIFLIGDFTSLIGDPSGRNATRPPLTREQIEANAKTYFEQAALVLDREKTE----IRY 138

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W   +    +++ + S ++V R+L  E    R +    +S  EF Y ++Q YD V L
Sbjct: 139 NSEWSMPLGADGMIK-LASRYTVARILEREDFTKRFQGGVPISIHEFLYPLMQGYDSVAL 197

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIW 246
             +    L++GG+DQ  N++ G +L ++        LT PLL    G  KM K+ +  + 
Sbjct: 198 NAD----LELGGTDQKFNLLVGRELQKQYGQEPQCILTMPLLEGLDGVEKMSKSKANYVG 253

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIAT 304
           ++++   P + +    +I D  +  + + L+  PM+EI R       G+   + K ++A 
Sbjct: 254 ISEK---PTDMFGKLMSISDVLMWRYFELLSFRPMAEIARFKAEIEAGRNPRDFKVLLAQ 310

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           EI    H + +AE+A                +P +++        + +  L+ +AG   S
Sbjct: 311 EIVARFHSQADAERALEDF-NHRAKGGVPDDIPAVTLG----GAPLAIGQLLKQAGLVPS 365

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           T+EA R+++   +KI+ + +S++ L+++       G   +  GK+      L
Sbjct: 366 TSEALRNIEQGGVKIDGATVSDKGLKVEA------GEYVVQVGKRRFARVTL 411


>gi|162448028|ref|YP_001621160.1| tyrosyl-tRNA synthetase [Acholeplasma laidlawii PG-8A]
 gi|189083638|sp|A9NHF4|SYY_ACHLI RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|161986135|gb|ABX81784.1| tyrosyl-tRNA synthetase [Acholeplasma laidlawii PG-8A]
          Length = 410

 Score =  392 bits (1007), Expect = e-107,   Method: Composition-based stats.
 Identities = 143/415 (34%), Positives = 218/415 (52%), Gaps = 15/415 (3%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D    L  RG +  +S+      L ++  +  Y+GYD T  SL  GHL Q++ + +LQK 
Sbjct: 2   DLFKQLEYRGMVKDVSDLELAKQLLNEQKIKFYVGYDPTGESLTVGHLVQIVRMLYLQKH 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P+ L+GGGT +IGDP    E R ++  ++  EN +KI+      IK      +   +
Sbjct: 62  GHTPVVLIGGGTGLIGDPRETSE-RSLLTLEKSLENAQKIENQIKGLIK-----GNVEFV 115

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  WL  I  I  LR+ G  FSV+ ML  ++V+ RL+    +S+ EF+YMILQ+ D++ 
Sbjct: 116 NNYEWLSKIDLISFLRDYGKHFSVSYMLHKDTVQKRLES--GISYTEFSYMILQSIDWLN 173

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLLTTASGTKMGKTLSGAI 245
           L +N D ++Q GGSDQWGN+  G++L  R+        L+SPLL  A GTK GK+ SGA+
Sbjct: 174 LYQNRDVKIQFGGSDQWGNLTSGLELIRRVLGKNDAVGLSSPLLLKADGTKFGKSESGAL 233

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIA 303
           WL+KE+TSPY  +QY+ N  D D+  F K LT +   EI+ + +      E+  A+K++A
Sbjct: 234 WLDKELTSPYELYQYFLNSSDTDIEQFLKLLTLIEQDEIEAILETHREKPELRHAQKVLA 293

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVS----RGMGLLTLIVKA 359
             +  +VHG+EE E A       F    +          +  +      G  L+ L+VK+
Sbjct: 294 KAVVELVHGKEELETALQVTEALFSGEFNGLTKSAYKTLESVIDVVRFNGESLIELVVKS 353

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
             A+S  EAR  + + AI I    I++    +            +  GKK + + 
Sbjct: 354 KLASSNREAREFISNGAISIQGEKITDSMYNVGETSKAFDTYAIIRRGKKKYALI 408


>gi|222056668|ref|YP_002539030.1| tyrosyl-tRNA synthetase [Geobacter sp. FRC-32]
 gi|221565957|gb|ACM21929.1| tyrosyl-tRNA synthetase [Geobacter sp. FRC-32]
          Length = 403

 Score =  392 bits (1007), Expect = e-107,   Method: Composition-based stats.
 Identities = 107/419 (25%), Positives = 193/419 (46%), Gaps = 30/419 (7%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLML 59
           M   K   + IL E+  +       +L+   + G  +    G+D TA  LH GH   L  
Sbjct: 7   MEIIKRGAVEILLEKELV------EKLEKSSATGVPLRVKAGFDPTAPDLHLGHTVLLHK 60

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG 119
           L   Q+ GH+   L+G  T +IGDP+ + E+R+++  +++ +N E  K      +     
Sbjct: 61  LRQFQQLGHEIYFLIGDFTGMIGDPTGKSETRKVLSREDVLKNAETYKEQVFKILDPEKT 120

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
           K    ++ N  WL  +   D++  + S ++V RML  E   +R   +Q +S  EF Y ++
Sbjct: 121 K----VVFNSEWLAKLSASDMIG-LASKYTVARMLEREDFNNRFSNQQPISIHEFMYPLI 175

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMG 238
           Q YD V L  +    +++GG+DQ  N++ G +L           +T PLL    G  KM 
Sbjct: 176 QGYDSVALKAD----VELGGTDQKFNLLVGRELQREWGQSPQTVITMPLLEGLDGVNKMS 231

Query: 239 KTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEI 295
           K+L   I +N+        +    ++ D  ++ + + L+ + M+ + ++    K      
Sbjct: 232 KSLGNYIGINEPAD---EIFGKIMSVSDELMLRYYELLSDMSMAALQQLKVDLKSGTVHP 288

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTL 355
            EAKK +  E+    HG+E A +A  + ++ F  +     MP I ++  +    + L  L
Sbjct: 289 MEAKKRLGREMVARFHGQEAAAEAEESFVKRFRDNQTPDDMPEIQMAAGDGK--ILLARL 346

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           + +AG   S +E RR ++   +K++   I++E L+I        G + L  GK+     
Sbjct: 347 LAEAGLVKSNSEGRRSIQGGGVKVDGEKINDENLEIPSA-----GQVILQVGKRRFAKV 400


>gi|28867837|ref|NP_790456.1| tyrosyl-tRNA synthetase [Pseudomonas syringae pv. tomato str.
           DC3000]
 gi|301381481|ref|ZP_07229899.1| tyrosyl-tRNA synthetase [Pseudomonas syringae pv. tomato Max13]
 gi|302058570|ref|ZP_07250111.1| tyrosyl-tRNA synthetase [Pseudomonas syringae pv. tomato K40]
 gi|302132204|ref|ZP_07258194.1| tyrosyl-tRNA synthetase [Pseudomonas syringae pv. tomato NCPPB
           1108]
 gi|81732643|sp|Q889Y8|SYY_PSESM RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|28851073|gb|AAO54151.1| tyrosyl-tRNA synthetase [Pseudomonas syringae pv. tomato str.
           DC3000]
          Length = 403

 Score =  392 bits (1007), Expect = e-107,   Method: Composition-based stats.
 Identities = 104/409 (25%), Positives = 174/409 (42%), Gaps = 24/409 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG    +     ++ L     +    G+D TA  LH GH   +  L   Q  GH+ I
Sbjct: 10  LIKRGADELLVEAELVEKLKRGQPLRIKAGFDPTAPDLHLGHTVLINKLRQFQDLGHQVI 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T +IGDPS +  +R  +  +++ +  E  K      +     +    +  N TW
Sbjct: 70  FLIGDFTGMIGDPSGKSATRPPLTREQVLDYAETYKSQVFKILDPAKTE----VAFNSTW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +  +   D +R + S ++V RML  +    R K  QS++  EF Y ++Q YD V L  + 
Sbjct: 126 MDKLSPADFIR-LSSQYTVARMLERDDFDKRYKSNQSIAIHEFLYPLVQGYDSVALKAD- 183

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G +L           LT PLL    G  KM K+L   + + + 
Sbjct: 184 ---VELGGTDQKFNLLMGRELQRAYGQEPQCILTMPLLEGLDGVKKMSKSLGNYVGIQE- 239

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEITT 308
             +P   +    +I D+ +  + + L+   M EI+  R     G    + K  +A E+  
Sbjct: 240 --APGIMYSKLVSIPDSLMWRYFELLSFRSMEEINGLRADCEAGANPRDIKIKLAEELVA 297

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
             HG E A  A  +A            +P IS++  E    M +  ++ KAG   +   A
Sbjct: 298 RFHGEEAAATAHRSAGNRMKEGELPDDLPEISVAAIE---DMPISAVLNKAGLVKNAAVA 354

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           R  L S  ++I+  ++ +    +KL             GKK      L 
Sbjct: 355 RDLLASGGVRIDGEVV-DRSFIVKL-----GATHVCQAGKKAFGRITLV 397


>gi|302189577|ref|ZP_07266250.1| tyrosyl-tRNA synthetase [Pseudomonas syringae pv. syringae 642]
          Length = 403

 Score =  392 bits (1007), Expect = e-107,   Method: Composition-based stats.
 Identities = 103/409 (25%), Positives = 173/409 (42%), Gaps = 24/409 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG    +     ++ L     +    G+D TA  LH GH   +  L   Q  GH+ I
Sbjct: 10  LIKRGADELLVEAELVEKLKRGQPLRIKAGFDPTAPDLHLGHTVLINKLRQFQDLGHQII 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T +IGDPS +  +R  +  +++ +  E  K      +     +    +  N TW
Sbjct: 70  FLIGDFTGMIGDPSGKSATRPPLTREQVLDYAETYKSQVFKILDPAKTE----VAFNSTW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +  +   D +R + S ++V RML  +    R K  QS++  EF Y ++Q YD V L  + 
Sbjct: 126 MDQLSPADFIR-LSSQYTVARMLERDDFDKRYKSNQSIAIHEFLYPLVQGYDSVALKAD- 183

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G +L           LT PLL    G  KM K+L   + + + 
Sbjct: 184 ---VELGGTDQKFNLLMGRELQRAYGQEPQCILTMPLLEGLDGVKKMSKSLGNYVGIQE- 239

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEITT 308
             +P   +    +I D+ +  + + L+   M EI+  +     G    + K  +A E+  
Sbjct: 240 --APGIMYSKLVSIPDSLMWRYFELLSFRSMEEINSLKSDCEAGANPRDIKIKLAEELVA 297

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
             HG E A  A  +A            +P IS++  E    M +  ++ KAG   +   A
Sbjct: 298 RFHGEEAAANAHRSAGNRMKEGELPDDLPEISVAAAE---DMPISAVLNKAGLVKNAAVA 354

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           R  L S  ++I+  ++ +     KL             GKK      L 
Sbjct: 355 RDLLASGGVRIDGEVV-DRSFVFKL-----GATHVCQAGKKAFGCVTLV 397


>gi|66047792|ref|YP_237633.1| tyrosyl-tRNA synthetase [Pseudomonas syringae pv. syringae B728a]
 gi|75500401|sp|Q4ZMM7|SYY_PSEU2 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|63258499|gb|AAY39595.1| Tyrosyl-tRNA synthetase, class Ib [Pseudomonas syringae pv.
           syringae B728a]
          Length = 403

 Score =  392 bits (1007), Expect = e-107,   Method: Composition-based stats.
 Identities = 103/409 (25%), Positives = 173/409 (42%), Gaps = 24/409 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG    +     ++ L     +    G+D TA  LH GH   +  L   Q  GH+ I
Sbjct: 10  LIKRGADELLVEAELVEKLKRGQPLRIKAGFDPTAPDLHLGHTVLINKLRQFQDLGHQII 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T +IGDPS +  +R  +  +++ +  E  K      +     +    +  N TW
Sbjct: 70  FLIGDFTGMIGDPSGKSATRPPLTREQVLDYAETYKSQVFKILDPAKTE----VAFNSTW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +  +   D +R + S ++V RML  +    R K  QS++  EF Y ++Q YD V L  + 
Sbjct: 126 MDQLSPADFIR-LSSQYTVARMLERDDFDKRYKSNQSIAIHEFLYPLVQGYDSVALKAD- 183

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G +L           LT PLL    G  KM K+L   + + + 
Sbjct: 184 ---VELGGTDQKFNLLMGRELQRAYGQEPQCILTMPLLEGLDGVKKMSKSLGNYVGIQE- 239

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEITT 308
             +P   +    +I D+ +  + + L+   M EID  +     G    + K  +A E+  
Sbjct: 240 --APGIMYSKLVSIPDSLMWRYFELLSFRSMEEIDGLKADCEAGANPRDIKIKLAEELVA 297

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
             HG E A  A  +A            +P +S++  E    M +  ++ KAG   +   A
Sbjct: 298 RFHGEEAAANAHRSAGNRMKEGELPDDLPELSVAAAE---DMPISAVLNKAGLVKNAAVA 354

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           R  L S  ++I+  ++ +     KL             GKK      L 
Sbjct: 355 RDLLASGGVRIDGEVV-DRSFVFKL-----GTTHVCQAGKKAFGRVTLV 397


>gi|134093531|ref|YP_001098606.1| tyrosyl-tRNA synthetase [Herminiimonas arsenicoxydans]
 gi|133737434|emb|CAL60477.1| Tyrosyl-tRNA synthetase (Tyrosine--tRNA ligase) (TyrRS)
           [Herminiimonas arsenicoxydans]
          Length = 413

 Score =  392 bits (1007), Expect = e-107,   Method: Composition-based stats.
 Identities = 102/420 (24%), Positives = 187/420 (44%), Gaps = 31/420 (7%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           +   K     +L E  F  +++   +     S   +   +G D TA  LH GH   L  +
Sbjct: 22  LTVAKRGVEELLIESEFAQKLARSEQ-----SGKPLRIKLGLDPTAPDLHLGHTVVLNKM 76

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             LQ  GH+ I L+G  TS+IGDPS R+ +R  +  ++I EN +      S  +     +
Sbjct: 77  RQLQDLGHQVIFLIGDFTSMIGDPSGRNITRPPLTKEQISENAKTYFSQASLVLDPARTE 136

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N  W   +    ++ E+ + ++V R+L  E    R +    +S  EF Y ++Q
Sbjct: 137 ----IRYNSEWCDPLGARGMI-ELSAKYTVARILEREDFTKRFQSNTPISLHEFLYPLMQ 191

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGK 239
            YD V L  +    L++GG+DQ  N++ G +L +     +   LT PLL    G  KM K
Sbjct: 192 GYDSVALKSD----LELGGTDQKFNLLVGRELQKSYGQEQQCILTMPLLEGLDGVEKMSK 247

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINE 297
           +    I + +   +    +    +I D  +  + + L+   ++EI +  K    G+   +
Sbjct: 248 SKGNYIGITEPGNT---MFAKLMSISDVMMWRYYELLSFRSLAEITQFRKDVEGGRNPRD 304

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A EI    H  + AE A    +           +P +++S       +G+  L+ 
Sbjct: 305 VKVLLAQEIVARFHSVQAAEDALADFVNR-SKGGIPDDIPELALS----GAPLGIGQLLK 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           +A    ST+EA R ++   ++I+ ++IS++ L+++       G + +  GK+      L 
Sbjct: 360 QANLCASTSEALRMVEQGGVRIDGAVISDKALKVEA------GTVVVQVGKRKFARVTLS 413


>gi|331017519|gb|EGH97575.1| tyrosyl-tRNA synthetase [Pseudomonas syringae pv. lachrymans str.
           M302278PT]
          Length = 399

 Score =  392 bits (1007), Expect = e-107,   Method: Composition-based stats.
 Identities = 104/409 (25%), Positives = 174/409 (42%), Gaps = 24/409 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG    +     ++ L     +    G+D TA  LH GH   +  L   Q  GH+ I
Sbjct: 10  LIKRGADELLVEAELVEKLKRGQPLRIKAGFDPTAPDLHLGHTVLINKLRQFQDLGHQVI 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T +IGDPS +  +R  +  +++ +  E  K      +     +    +  N TW
Sbjct: 70  FLIGDFTGMIGDPSGKSATRPPLTREQVLDYAETYKSQVFKILDPAKTE----VAFNSTW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +  +   D +R + S ++V RML  +    R K  QS++  EF Y ++Q YD V L  + 
Sbjct: 126 MDKLSPADFIR-LSSQYTVARMLERDDFDKRYKSNQSIAIHEFLYPLVQGYDSVALKAD- 183

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G +L           LT PLL    G  KM K+L   + + + 
Sbjct: 184 ---VELGGTDQKFNLLMGRELQRAYGQEPQCILTMPLLEGLDGVKKMSKSLGNYVGIQE- 239

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEITT 308
             +P   +    +I D+ +  + + L+   M EI+  R     G    + K  +A E+  
Sbjct: 240 --APGIMYSKLVSIPDSLMWRYFELLSFRSMEEINGLRADCEAGANPRDIKIKLAEELVA 297

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
             HG E A  A  +A            +P IS++  E    M +  ++ KAG   +   A
Sbjct: 298 RFHGEEAAATAHRSAGNRMKEGELPDDLPEISVAAIE---DMPISAVLNKAGLVKNAAVA 354

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           R  L S  ++I+  ++ +    +KL             GKK      L 
Sbjct: 355 RDLLASGGVRIDGEVV-DRSFIVKL-----GATHVCQAGKKAFGRITLV 397


>gi|156545533|ref|XP_001607236.1| PREDICTED: similar to GA14214-PA [Nasonia vitripennis]
          Length = 438

 Score =  392 bits (1007), Expect = e-107,   Method: Composition-based stats.
 Identities = 136/409 (33%), Positives = 207/409 (50%), Gaps = 23/409 (5%)

Query: 30  LCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDE 89
           L +Q     Y G+D TA SLH G+L  LM L   Q+ GH+ I+++GG T +IGDPS R  
Sbjct: 17  LVNQNPQCVYAGFDPTADSLHIGNLLVLMNLLHWQRGGHQVIAVVGGATGLIGDPSHRTN 76

Query: 90  SRRMMRSQEIQENIEKIKGI----FSSFIKYGTGKTD-----ALMLNNETWLCSIKYIDL 140
            R  +    +  NI  IK      F +  KY             ++NN +W   +  +D 
Sbjct: 77  ERVALDQDVLNSNITSIKKNIVTLFENHEKYFWKDKQYPLPPIKIINNLSWYKDVNILDF 136

Query: 141 LREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGS 200
           +R+IG  F +  ML   SV+SRLK E  +SF EF Y I QAYD+++L   Y+CR Q+GGS
Sbjct: 137 IRDIGKHFRMGTMLGRTSVQSRLKSETGMSFTEFTYQIFQAYDWLQLLNKYNCRFQIGGS 196

Query: 201 DQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQY 260
           DQ GNI+ G +L  R     +F  T PL+T   G K GK+L  AIWL+ + +S +  +QY
Sbjct: 197 DQMGNIMAGHELISRTARLNVFGFTLPLITAEGGKKFGKSLGNAIWLSPKRSSSFQMYQY 256

Query: 261 WRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIATEITTMVHGREEAEK 318
           +    DADV ++ K  T LP+++I+++        E  +A++I+A  +T +VHG E  + 
Sbjct: 257 FIRTTDADVENYLKLFTFLPLNQINQIMVEHRQSPENRKAQQILAENVTLLVHGDEALQA 316

Query: 319 AATAAMECFDMSIHSQHMPTIS-----------ISKDEVSRGMGLLTLIVKAGFATSTNE 367
           A  A +  +D SI S  + +             +        M    L +KA    S ++
Sbjct: 317 AKNATLLLYDKSIESLSIMSQEQIAAAFEGANIVDIVPDDSNMTAFDLAMKAKCFKSESD 376

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNI-KLSFGKKNHIICH 415
           A R +K+ A  IN   +++   +IK         I  +  GK+ + +  
Sbjct: 377 AVRLIKAGAFYINYKRVTDLDEKIKFGKHILPNYITLIRTGKRTYHLVR 425


>gi|309389099|gb|ADO76979.1| tyrosyl-tRNA synthetase [Halanaerobium praevalens DSM 2228]
          Length = 426

 Score =  392 bits (1007), Expect = e-107,   Method: Composition-based stats.
 Identities = 101/419 (24%), Positives = 189/419 (45%), Gaps = 29/419 (6%)

Query: 9   LSILSERGFIHQISNPRELDILC-----SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           L IL  RG +  + +  +L             +   +G D +A  +H GH   L  L   
Sbjct: 27  LKILK-RG-VSDLISEEDLKQKLIEAQKENRPLRVKLGLDPSAPDIHLGHTVVLRKLKQF 84

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q  GH+   ++G  T +IGDP+ + E+R  +  +E+ EN +  +  FS  +     K   
Sbjct: 85  QDLGHQVYLIIGDFTGMIGDPTGKSETRNQLTKEEVLENAKTYQEQFSKVLDPEKTK--- 141

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            ++ N  WL  + + D+L E+ + ++V R+L  +    R    + +   EF Y ++Q YD
Sbjct: 142 -VVFNGDWLKEMDFADVL-ELSAHYTVARILERDDFSKRYNAGKPIGIHEFFYPLMQGYD 199

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLS 242
            V +  +    +++GG+DQ  N++ G  L +         L  PLL    G  KM K+L 
Sbjct: 200 SVAIKAD----VELGGTDQRFNLLVGRKLQQEYGQKAQVVLMMPLLEGLDGVNKMSKSLD 255

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAK 299
             I +      P + +    +I DA ++ + + LT + +++++ M     +      E K
Sbjct: 256 NYIGV---YDQPADMFGKVMSIPDAMIIRYFELLTDISIAKLNEMKAKLERDDFNPMELK 312

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVK 358
           K +A EI T  H +E A +A       F      + +P I I++ ++  G + ++ L+  
Sbjct: 313 KQLAAEIVTEYHDQEAAVEARREFESVFSKGNLPEDIPIIEIAEADLDAGELWIVKLVAA 372

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            G   S ++ARR +K  A+ I++       + ++++D      + +  GK+      L 
Sbjct: 373 TGLVDSNSQARRMIKQGAVSIDDQKYEKINIDLEVKD-----GMIIQIGKRRFAKIKLV 426


>gi|187925323|ref|YP_001896965.1| tyrosyl-tRNA synthetase [Burkholderia phytofirmans PsJN]
 gi|187716517|gb|ACD17741.1| tyrosyl-tRNA synthetase [Burkholderia phytofirmans PsJN]
          Length = 416

 Score =  392 bits (1007), Expect = e-107,   Method: Composition-based stats.
 Identities = 97/413 (23%), Positives = 185/413 (44%), Gaps = 30/413 (7%)

Query: 12  LSERG----FIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           +++RG     I      +      +   +   +G D TA  +H GH   L  +  LQ  G
Sbjct: 26  ITKRGVDELLIEDEFAQKLAKSAATGKPLRIKLGLDPTAPDIHIGHTVVLNKMRQLQDLG 85

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H  I L+G  TS+IGDPS R+ +R  +  ++I+ N +      +  +     +    +  
Sbjct: 86  HTVIFLIGDFTSLIGDPSGRNATRPPLTREQIESNAKTYFDQAALVLDREKTE----IRY 141

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W   +    +++ + S ++V R+L  E    R +    +S  EF Y ++Q YD V L
Sbjct: 142 NSEWSMPLGADGMIK-LASRYTVARILEREDFTKRFQGGVPISIHEFLYPLMQGYDSVAL 200

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIW 246
             +    L++GG+DQ  N++ G +L ++    +   LT PLL    G  KM K+ +  I 
Sbjct: 201 NAD----LELGGTDQKFNLLVGRELQKQYGQEQQCILTMPLLEGLDGVEKMSKSKNNYIG 256

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIAT 304
           ++++   P + +    +I D  +  + + L+  PM EI   R     G+   + K ++  
Sbjct: 257 ISEK---PTDMFGKLMSISDVLMWRYFELLSFRPMDEIAGFRKEIEAGRNPRDFKVLLGQ 313

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           EI    H + +AE+A                +P ++++       + +  L+ +A    S
Sbjct: 314 EIVARFHSQADAERALEDF-NHRAKGGVPDDIPAVTLA----GAPLAIGQLLKQANLVPS 368

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           T+EA R+++   +KI+ + +S++ L+++       G   +  GK+      L 
Sbjct: 369 TSEALRNIEQGGVKIDGATVSDKGLKVEA------GEYVVQVGKRRFARVTLT 415


>gi|9971901|gb|AAG10463.1|AF279106_25 predicted tyrosyl-tRNA synthetase [uncultured marine gamma
           proteobacterium EBAC31A08]
          Length = 395

 Score =  392 bits (1007), Expect = e-107,   Method: Composition-based stats.
 Identities = 108/413 (26%), Positives = 181/413 (43%), Gaps = 23/413 (5%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           SD L  L +RG    ++       L S   +    G+D TA  LH GH   L  L   Q 
Sbjct: 2   SDALK-LIKRGTDEILTESDLKKKLDSGKQLIIKAGFDPTAPDLHLGHTVLLNKLRHFQD 60

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHK I L+G  T  IGDPS ++++R  + S+E+  N +  +      +K    K    +
Sbjct: 61  LGHKVIFLIGDFTGQIGDPSGKNKTRPTLTSEELISNAKTYEKQVFKILK----KELTEV 116

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
             N  W   +   D L  + S ++V RML  +    R    QS++  EF Y ++Q YD V
Sbjct: 117 KFNSEWCNKLG-ADGLIGLASKYNVARMLERDDFNKRYSANQSIAIHEFLYPLVQGYDSV 175

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGA 244
            L    +  ++ GG+DQ  N++ G +L           LT P+L    G  KM K+L+  
Sbjct: 176 AL----EADVECGGTDQKFNLLVGRELQRSYGQEPQVVLTVPILEGLDGINKMSKSLNNF 231

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKII 302
           I +++E   P + +    +I D  +  + + L+     EI   +    +G    + K ++
Sbjct: 232 IAIDEE---PNDMFGKIMSISDELMWRWFELLSFTSEKEIGVLKKKMEEGTNPRDIKFLL 288

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFA 362
           A E+    H   +  K   A ++ F        +P++S+  D  + G+ L+ L+      
Sbjct: 289 AEELVDRFHSEGDGSKCKEAFLQRFQKGQMPDDIPSMSV--DVGAEGIPLVNLLKNCEMT 346

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +ST+EA R +K   +KI++  I + K+ I               GK+  +   
Sbjct: 347 SSTSEAMRLVKQGGVKIDSVKIEDPKMLIS-----KGQESIYQVGKRKFLKIK 394


>gi|15595865|ref|NP_249359.1| tyrosyl-tRNA synthetase [Pseudomonas aeruginosa PAO1]
 gi|116054393|ref|YP_788838.1| tyrosyl-tRNA synthetase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|296387162|ref|ZP_06876661.1| tyrosyl-tRNA synthetase [Pseudomonas aeruginosa PAb1]
 gi|81541822|sp|Q9I5Q3|SYY2_PSEAE RecName: Full=Tyrosyl-tRNA synthetase 2; AltName:
           Full=Tyrosine--tRNA ligase 2; Short=TyrRS 2
 gi|9946546|gb|AAG04057.1|AE004501_9 tyrosyl-tRNA synthetase 2 [Pseudomonas aeruginosa PAO1]
 gi|115589614|gb|ABJ15629.1| tyrosyl-tRNA synthetase 2 [Pseudomonas aeruginosa UCBPP-PA14]
          Length = 399

 Score =  391 bits (1006), Expect = e-107,   Method: Composition-based stats.
 Identities = 104/408 (25%), Positives = 172/408 (42%), Gaps = 24/408 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG    +     +  L     +    G+D TA  LH GH   +  L   Q  GH+ I
Sbjct: 10  LIQRGADEILVEAELVAKLKRGQPLRIKAGFDPTAPDLHLGHTVLINKLRQFQDLGHQVI 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T +IGDPS +  +R  +  +++ EN E  K      +     +    +  N TW
Sbjct: 70  FLIGDFTGMIGDPSGKSVTRPPLTREQVLENAETYKSQVFKILDPAKTE----VAFNSTW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +  +   D +R + S ++V RML  +    R    Q ++  EF Y ++Q YD V L  + 
Sbjct: 126 MDQLTPADFIR-LASQYTVARMLERDDFSKRYASNQPIAIHEFLYPLVQGYDSVALKAD- 183

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G +L           LT PLL    G  KM K+L   I + + 
Sbjct: 184 ---VELGGTDQKFNLLMGRELQRAYGQEAQVILTMPLLEGLDGVKKMSKSLGNYIGIQE- 239

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEITT 308
             +P   +    +I D  +  + + L+   + EID  R     G    + K  +A EI  
Sbjct: 240 --APGVMYSKLVSIPDTLMWRYFELLSFRSLDEIDSFRKDVEAGANPRDIKIKLAEEIVA 297

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
             HG E A  A  +A          + +P I +S  E    M + +++ KAG   +   A
Sbjct: 298 RFHGEEAAASAHKSAGNRLKEGELPEDLPEIELSSPE---DMPVASVLNKAGLVKNAAAA 354

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           R  L + ++K++  ++ +    + L             GKK      L
Sbjct: 355 RDLLGAGSVKVDGQVV-DRTFMLAL-----GETRVFQAGKKAFARITL 396


>gi|330970780|gb|EGH70846.1| tyrosyl-tRNA synthetase [Pseudomonas syringae pv. aceris str.
           M302273PT]
          Length = 399

 Score =  391 bits (1006), Expect = e-107,   Method: Composition-based stats.
 Identities = 103/409 (25%), Positives = 173/409 (42%), Gaps = 24/409 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG    +     ++ L     +    G+D TA  LH GH   +  L   Q  GH+ I
Sbjct: 10  LIKRGADELLVEAELVEKLKRGQPLRIKAGFDPTAPDLHLGHTVLINKLRQFQDLGHQII 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T +IGDPS +  +R  +  +++ +  E  K      +     +    +  N TW
Sbjct: 70  FLIGDFTGMIGDPSGKSATRPPLTREQVLDYAETYKSQVFKILDPAKTE----VAFNSTW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +  +   D +R + S ++V RML  +    R K  QS++  EF Y ++Q YD V L  + 
Sbjct: 126 MDQLSPADFIR-LSSQYTVARMLERDDFDKRYKSNQSIAIHEFLYPLVQGYDSVALKAD- 183

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G +L           LT PLL    G  KM K+L   + + + 
Sbjct: 184 ---VELGGTDQKFNLLMGRELQRAYGQEPQCILTMPLLEGLDGVKKMSKSLGNYVGIQE- 239

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEITT 308
             +P   +    +I D+ +  + + L+   M EID  +     G    + K  +A E+  
Sbjct: 240 --APGIMYSKLVSIPDSLMWRYFELLSFRSMEEIDGLKADCEAGANPRDIKIKLAEELVA 297

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
             HG E A  A  +A            +P +S++  E    M +  ++ KAG   +   A
Sbjct: 298 RFHGEEAAANAHRSAGNRMKEGELPDDLPELSVAAAE---DMPISAVLNKAGLVKNAAVA 354

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           R  L S  ++I+  ++ +     KL             GKK      L 
Sbjct: 355 RDLLASGGVRIDGEVV-DRSFVFKL-----GATHVCQAGKKAFGRVTLV 397


>gi|323527315|ref|YP_004229468.1| tyrosyl-tRNA synthetase [Burkholderia sp. CCGE1001]
 gi|323384317|gb|ADX56408.1| tyrosyl-tRNA synthetase [Burkholderia sp. CCGE1001]
          Length = 416

 Score =  391 bits (1006), Expect = e-107,   Method: Composition-based stats.
 Identities = 96/412 (23%), Positives = 181/412 (43%), Gaps = 30/412 (7%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           +  L     I      +      +   +   +G D TA  +H GH   L  +  LQ  GH
Sbjct: 31  VDEL----LIEDEFAQKLAKSQATGTPLRIKLGLDPTAPDIHIGHTVVLNKMRQLQDLGH 86

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
             I L+G  TS+IGDPS R+ +R  +  ++I+ N +      +  +     +    +  N
Sbjct: 87  TVIFLIGDFTSLIGDPSGRNATRPPLTREQIESNAKTYFEQAALVLDREKTE----IRYN 142

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             W   +    +++ + S ++V R+L  E    R +    +S  EF Y ++Q YD V L 
Sbjct: 143 SEWSMPLGADGMIK-LASRYTVARILEREDFTKRFQSGVPISIHEFLYPLMQGYDSVALN 201

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWL 247
            +    L++GG+DQ  N++ G +L ++    +   LT PLL    G  KM K+ +  I +
Sbjct: 202 AD----LELGGTDQKFNLLVGRELQKQYGQEQQCILTMPLLEGLDGVEKMSKSKNNYIGI 257

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATE 305
           ++    P + +    +I D  +  + + L+  PM EI   R     G+   + K ++  E
Sbjct: 258 SE---RPTDMFGKLMSISDTLMWRYFELLSFRPMDEIAAFRKEAEAGRNPRDFKVMLGQE 314

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           I    H + +AE+A                +P ++++       + +  L+ +A    ST
Sbjct: 315 IVARFHSQADAERALEDF-NHRAKGGVPDDIPAVALA----GAPLAIGQLLKQANLVPST 369

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           +EA R+++   +KI+ + +S++ L+++       G   +  GK+      L 
Sbjct: 370 SEALRNIEQGGVKIDGATVSDKGLKVEA------GEYVVQVGKRRFARVTLT 415


>gi|322515509|ref|ZP_08068495.1| tyrosine--tRNA ligase [Actinobacillus ureae ATCC 25976]
 gi|322118476|gb|EFX90727.1| tyrosine--tRNA ligase [Actinobacillus ureae ATCC 25976]
          Length = 396

 Score =  391 bits (1006), Expect = e-107,   Method: Composition-based stats.
 Identities = 102/411 (24%), Positives = 176/411 (42%), Gaps = 27/411 (6%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L+ L  RG  +  S    ++ L     +   +G D TA  +H GH   L  L   Q+ GH
Sbjct: 9   LAELK-RGVENIYSEEDLIEKLKENRPLRVKLGADPTAPDIHLGHTVVLNKLRQFQQLGH 67

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           + I L+G  T ++GDPS ++ +R  +  +++  N E  K      +          +  N
Sbjct: 68  EVIFLIGDFTGMVGDPSGKNSTRPPLTREDVLRNAETYKQQLFKILD----PNKTRVAFN 123

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL  +    ++R + S ++V RML  +  + R    QS++  EF Y +LQ +D V L 
Sbjct: 124 SEWLGKLGTEGMIR-LASNYTVARMLERDDFKKRFANNQSIAIHEFIYPLLQGHDSVAL- 181

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWL 247
              +  +++GG+DQ  N++ G +L +        A+T PLL    G  KM K+L   I +
Sbjct: 182 ---EADVELGGTDQTFNLLVGRELQKSAGQKPQVAMTLPLLVGLDGEKKMSKSLGNYIGV 238

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATE 305
                 P + +    +I D  +  +   L+  P+ EI ++      GK   + K ++A E
Sbjct: 239 T---DVPSDMFGKVMSISDELMWDWYNLLSFRPLDEIAQLKADVAAGKNPRDVKILLAKE 295

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           +    H +  A+ A    +  F        MP  +         +GL TL+ +AG   ST
Sbjct: 296 LIARFHDQAAADAAEQEFINRFQKGGIPDEMPEFT-----FEGEIGLATLLKEAGLVAST 350

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +EA R  +   +KI+   + + +           G      GK+      +
Sbjct: 351 SEAIRSAQQGGVKIDGEKVEDVRQN------AQQGTFVYQVGKRKFARVTV 395


>gi|121534232|ref|ZP_01666057.1| tyrosyl-tRNA synthetase [Thermosinus carboxydivorans Nor1]
 gi|121307335|gb|EAX48252.1| tyrosyl-tRNA synthetase [Thermosinus carboxydivorans Nor1]
          Length = 405

 Score =  391 bits (1006), Expect = e-107,   Method: Composition-based stats.
 Identities = 110/419 (26%), Positives = 189/419 (45%), Gaps = 30/419 (7%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFW 62
            K     IL E   +       +L    S G  +   +G D TA  +H GH   L  L  
Sbjct: 11  IKRGVAEILPEPLLV------EKLKRSVSTGVPLRVKLGLDPTAPDIHLGHTVVLRKLKQ 64

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD 122
            Q  GH  I ++G  T  IGDP+ + E+R+ +  +EI+ N    +      +     K  
Sbjct: 65  FQDLGHHIIIIIGDFTGRIGDPTGKSETRKQLTEEEIRINARTYEEQIFRILD----KEK 120

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
             ++ N +WL  + + D+++ + + ++V RML  E    R K  + +S  EF Y ++Q Y
Sbjct: 121 TEVVFNSSWLAPLSFADVIK-LAAQYTVARMLEREDFSKRFKEGRPISIHEFFYPLMQGY 179

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTL 241
           D V L  +    ++ GG+DQ  N++ G  L E+       A+  P+L    G  KM K+L
Sbjct: 180 DSVALKAD----IEFGGTDQKFNLLMGRHLQEQFGQEPQVAIMMPILEGLDGVNKMSKSL 235

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEA 298
              I +N+    P   +    +I D  +V + + +T + + E++ +    K  G    +A
Sbjct: 236 GNYIGINEP---PGEIYGKAMSIPDDLMVRYYELVTDVSLEELEAIRHGLKTGGLHPRDA 292

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVK 358
           K  +A  +  + HG E A+ A    +  F       +MP IS+   +    + L  L+V+
Sbjct: 293 KMRLAHTLVRLYHGIEAADNAQAEFIRVFQQRDIPTNMPEISLPASD--APVWLPKLLVQ 350

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            G A S +EA+R ++  A+KIN   I+N   ++ + D      + +  GK+      L 
Sbjct: 351 LGLAVSNSEAKRAIQQGAVKINGEKITNVDEEVTIAD-----GMVVQVGKRKFAKIVLS 404


>gi|307213308|gb|EFN88760.1| Probable tyrosyl-tRNA synthetase, mitochondrial [Harpegnathos
           saltator]
          Length = 462

 Score =  391 bits (1006), Expect = e-107,   Method: Composition-based stats.
 Identities = 134/435 (30%), Positives = 211/435 (48%), Gaps = 26/435 (5%)

Query: 6   SDFLSILSERGFIHQISNP---RELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
            + L  L ERG    I       E+  L ++     Y G+D TA SLH G+L  LM L  
Sbjct: 27  KNILK-LHERGMYENIFPNISTNEIVELLNKSPQCVYAGFDPTADSLHIGNLLILMNLLH 85

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESR----RMMRSQEIQENIEKIKGIFSSFIKYGT 118
            Q+ GH+ I+L+GG T +IGDPS R   R    + +  + ++  ++ I+ IF++   Y  
Sbjct: 86  WQRAGHQVIALVGGATGLIGDPSHRKSERIEIEKCLIEENVKSIMKNIETIFTNHENYFW 145

Query: 119 GKTDA-----LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLE 173
                     +++NN  W   +  I+ +R IG +  +  ML   SV++RL  +  +SF E
Sbjct: 146 KYKQESLRPLIIVNNLNWYTDVNVIEFVRNIGKYLRMGTMLGRASVQTRLNSDTGMSFTE 205

Query: 174 FNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTAS 233
           F Y + QAYD+++L   Y+C  Q+GGSDQ GNI+ G DL  +    +++ +T PL+T   
Sbjct: 206 FTYQVFQAYDWLQLMIKYNCCFQIGGSDQMGNIMSGYDLIAKSTRKQVYGITIPLITAEG 265

Query: 234 GTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK 293
           G K GK+L  AIWL+   +S +  +QY+    D+DV    K  T L + +I+ +     K
Sbjct: 266 GKKFGKSLMNAIWLSSMKSSSFQLYQYFIRTKDSDVKKLFKLFTFLSLDKINEIVDEHMK 325

Query: 294 EI--NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSI----------HSQHMPTISI 341
                 A+KI+A ++T +VHG E    A  A+   +D SI           +      +I
Sbjct: 326 NPEQRIAQKILAQQVTLLVHGEEGLFAAKRASAVLYDQSIEILVKMNASELADVFEAATI 385

Query: 342 SKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ-DFDSTG 400
                  G+ +  L +KA    S ++A+R + +    IN+  I+N    I       S  
Sbjct: 386 VDVLSEPGLTVYNLAIKAKCFKSNDDAQRIITAGGFYINHKKITNLNEAIVPGIHILSNN 445

Query: 401 NIKLSFGKKNHIICH 415
              L  GKK + I  
Sbjct: 446 ISLLRVGKKTYYIVR 460


>gi|315125691|ref|YP_004067694.1| tyrosyl-tRNA synthetase II [Pseudoalteromonas sp. SM9913]
 gi|315014205|gb|ADT67543.1| tyrosyl-tRNA synthetase II [Pseudoalteromonas sp. SM9913]
          Length = 399

 Score =  391 bits (1006), Expect = e-106,   Method: Composition-based stats.
 Identities = 97/407 (23%), Positives = 179/407 (43%), Gaps = 23/407 (5%)

Query: 15  RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLM 74
           RG    +     ++ L S   +    G+D TA  LH GH   +  +   Q  GH+ I L+
Sbjct: 12  RGAEEILIEDELVEKLKSGKKLKIKAGFDPTAPDLHLGHTVLINKMKTFQDLGHEVIFLI 71

Query: 75  GGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCS 134
           G  T +IGDP+ ++ +R+ +   ++  N E  K      +          +  N TW+  
Sbjct: 72  GDFTGMIGDPTGKNVTRKPLTRDDVLANAETYKEQVFKILDPAKT----TVAFNSTWMEK 127

Query: 135 IKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCR 194
           +    +++ + +  +V RML  +  + R    QS++  EF Y ++Q +D V L  +    
Sbjct: 128 LGAAGMIK-LAARQTVARMLERDDFKKRYAGGQSIAIHEFLYPLVQGWDSVALESD---- 182

Query: 195 LQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTS 253
           +++GG+DQ  N++ G +L +         L  PLL    G  KM K+L   I +     +
Sbjct: 183 VELGGTDQRFNLLMGRELQKDEGQKPQTVLMMPLLEGTDGVQKMSKSLGNYIGIT---DT 239

Query: 254 PYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATEITTMVH 311
           P + +    +I D  +  +   L++L + +I    +   QG    + K  +A E+    H
Sbjct: 240 PSDMFGKIMSISDVLMWRYYDLLSSLSIEQIAAQKQRVEQGTNPRDIKIELAKELIARFH 299

Query: 312 GREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRH 371
              +A+ A    ++ F        +P ++++ DE    + +  L+ +AG   ST+EA R 
Sbjct: 300 SEADAQAAHDDFIQRFQKKALPDEIPELTVNIDE--ESILIANLLKEAGLVASTSEAMRM 357

Query: 372 LKSNAIKINNS-IISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           +K  A+K+N    I++ KL+I               GK+      + 
Sbjct: 358 IKQGAVKLNGEDKITDTKLEI-----VKGTTAIYQVGKRKFANITVA 399


>gi|170693375|ref|ZP_02884534.1| tyrosyl-tRNA synthetase [Burkholderia graminis C4D1M]
 gi|170141530|gb|EDT09699.1| tyrosyl-tRNA synthetase [Burkholderia graminis C4D1M]
          Length = 417

 Score =  391 bits (1005), Expect = e-106,   Method: Composition-based stats.
 Identities = 97/416 (23%), Positives = 184/416 (44%), Gaps = 31/416 (7%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           K     +L E  F  +++         +   +   +G D TA  +H GH   L  +  LQ
Sbjct: 29  KRGVDELLIEEEFAQKLA-----KSAATGTPLRIKLGLDPTAPDIHIGHTVVLNKMRQLQ 83

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GH  I L+G  TS+IGDPS R+ +R  +  ++I+ N +      +  +     +    
Sbjct: 84  DLGHTVIFLIGDFTSLIGDPSGRNATRPPLTREQIESNAKTYFEQAALVLDREKTE---- 139

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           +  N  W   +    +++ + S ++V R+L  E    R +    +S  EF Y ++Q YD 
Sbjct: 140 IRYNSEWSMPLGADGMIK-LASRYTVARILEREDFTKRFQSGVPISIHEFLYPLMQGYDS 198

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSG 243
           V L  +    L++GG+DQ  N++ G +L ++    +   LT PLL    G  KM K+ + 
Sbjct: 199 VALNAD----LELGGTDQKFNLLVGRELQKQYGQEQQCILTMPLLEGLDGVEKMSKSKNN 254

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKKI 301
            I ++++   P + +    +I D  +  + + L+  PM EI         G+   + K +
Sbjct: 255 YIGISEK---PTDMFGKLMSISDTLMWRYFELLSFRPMDEIAAFKREAEAGRNPRDFKVM 311

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGF 361
           +  EI    H   +AE+A                +P ++++       + +  L+ +A  
Sbjct: 312 LGQEIVARFHSPADAERALEDF-NHRAKGGVPDDIPAVALA----GAPLAIGQLLKQANL 366

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
             ST+EA R+++   +KI+ + +S++ L+++       G   +  GK+      L 
Sbjct: 367 VPSTSEALRNIEQGGVKIDGATVSDKGLKVEA------GEYVVQVGKRRFARVTLT 416


>gi|330868552|gb|EGH03261.1| tyrosyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str.
           0893_23]
          Length = 398

 Score =  391 bits (1005), Expect = e-106,   Method: Composition-based stats.
 Identities = 103/409 (25%), Positives = 173/409 (42%), Gaps = 24/409 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG    +     ++ L     +    G+D TA  LH GH   +  L   Q  GH+ I
Sbjct: 10  LIKRGADELLVEAELVEKLKRGQPLRIKAGFDPTAPDLHLGHTVLINKLRQFQDLGHQII 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T +IGDPS +  +R  +  +++ +  E  K      +     +    +  N TW
Sbjct: 70  FLIGDFTGMIGDPSGKSATRPPLTREQVLDYAETYKSQVFKILDPAKTE----VAFNSTW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +  +   D +R + S ++V RML  +    R K  QS++  EF Y ++Q YD V L  + 
Sbjct: 126 MDKLSPADFIR-LSSQYTVARMLERDDFDKRYKSNQSIAIHEFLYPLVQGYDSVALKAD- 183

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G +L           LT PLL    G  KM K+L   + + + 
Sbjct: 184 ---VELGGTDQKFNLLMGRELQRAYGQEPQCILTMPLLEGLDGVKKMSKSLGNYVGIQE- 239

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEITT 308
             +P   +    +I D+ +  + + L+   M EI+  +     G    + K  +A E+  
Sbjct: 240 --APGIMYSKLVSIPDSLMWRYFELLSFRSMEEINGLKADCEAGANPRDIKIKLAEELVA 297

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
             HG E A  A  +A            +P IS++  E    M +  ++ KAG   +   A
Sbjct: 298 RFHGEEAAANAHRSAGNRMKEGELPDDLPEISVAATE---DMPISAVLNKAGLVKNAAVA 354

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           R  L S  ++I+  ++ +     KL             GKK      L 
Sbjct: 355 RDLLASGGVRIDGEVV-DRGFVFKL-----GATHVCQAGKKAFGRVTLV 397


>gi|330878330|gb|EGH12479.1| tyrosyl-tRNA synthetase [Pseudomonas syringae pv. morsprunorum str.
           M302280PT]
          Length = 403

 Score =  391 bits (1005), Expect = e-106,   Method: Composition-based stats.
 Identities = 104/409 (25%), Positives = 173/409 (42%), Gaps = 24/409 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG    +     ++ L     +    G+D TA  LH GH   +  L   Q  GH+ I
Sbjct: 10  LIKRGADELLVEAELVEKLKRGQPLRIKAGFDPTAPDLHLGHTVLINKLRQFQDLGHQVI 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T +IGDPS +  +R  +  +++ +  E  K      +     +    +  N TW
Sbjct: 70  FLIGDFTGMIGDPSGKSATRPPLTREQVLDYAETYKSQVFKILDPAKTE----VAFNSTW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +  +   D +R + S ++V RML  +    R K  QS++  EF Y ++Q YD V L  + 
Sbjct: 126 MDKLSPADFIR-LSSQYTVARMLERDDFDKRYKSNQSIAIHEFLYPLVQGYDSVALKAD- 183

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G +L           LT PLL    G  KM K+L   + + + 
Sbjct: 184 ---VELGGTDQKFNLLMGRELQRAYGQEPQCILTMPLLEGLDGVKKMSKSLGNYVGIQE- 239

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEITT 308
             +P   +    +I D+ +  + + L+   M EI   R     G    + K  +A E+  
Sbjct: 240 --APGIMYSKLVSIPDSLMWRYFELLSFRSMEEISGLRADCEAGANPRDIKIKLAEELVA 297

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
             HG E A  A  +A            +P IS++  E    M +  ++ KAG   +   A
Sbjct: 298 RFHGEEAAATAHRSAGNRMKEGELPDDLPEISVAAIE---DMPISAVLNKAGLVKNAAVA 354

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           R  L S  ++I+  ++ +    +KL             GKK      L 
Sbjct: 355 RDLLASGGVRIDGEVV-DRSFMVKL-----GATHVCQAGKKAFGRITLV 397


>gi|289623555|ref|ZP_06456509.1| tyrosyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str.
           NCPPB3681]
 gi|289650839|ref|ZP_06482182.1| tyrosyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str.
           2250]
          Length = 403

 Score =  391 bits (1005), Expect = e-106,   Method: Composition-based stats.
 Identities = 103/409 (25%), Positives = 173/409 (42%), Gaps = 24/409 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG    +     ++ L     +    G+D TA  LH GH   +  L   Q  GH+ I
Sbjct: 10  LIKRGADELLVEAELVEKLKRGQPLRIKAGFDPTAPDLHLGHTVLINKLRQFQDLGHQII 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T +IGDPS +  +R  +  +++ +  E  K      +     +    +  N TW
Sbjct: 70  FLIGDFTGMIGDPSGKSATRPPLTREQVLDYAETYKSQVFKILDPAKTE----VAFNSTW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +  +   D +R + S ++V RML  +    R K  QS++  EF Y ++Q YD V L  + 
Sbjct: 126 MDKLSPADFIR-LSSQYTVARMLERDDFDKRYKSNQSIAIHEFLYPLVQGYDSVALKAD- 183

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G +L           LT PLL    G  KM K+L   + + + 
Sbjct: 184 ---VELGGTDQKFNLLMGRELQRAYGQEPQCILTMPLLEGLDGVKKMSKSLGNYVGIQE- 239

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEITT 308
             +P   +    +I D+ +  + + L+   M EI+  +     G    + K  +A E+  
Sbjct: 240 --APGIMYSKLVSIPDSLMWRYFELLSFRSMEEINGLKADCEAGANPRDIKIKLAEELVA 297

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
             HG E A  A  +A            +P IS++  E    M +  ++ KAG   +   A
Sbjct: 298 RFHGEEAAANAHRSAGNRMKEGELPDDLPEISVAATE---DMPISAVLNKAGLVKNAAVA 354

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           R  L S  ++I+  ++ +     KL             GKK      L 
Sbjct: 355 RDLLASGGVRIDGEVV-DRGFVFKL-----GATHVCQAGKKAFGRVTLV 397


>gi|94268046|ref|ZP_01291067.1| Tyrosyl-tRNA synthetase, class Ib [delta proteobacterium MLMS-1]
 gi|93451751|gb|EAT02515.1| Tyrosyl-tRNA synthetase, class Ib [delta proteobacterium MLMS-1]
          Length = 411

 Score =  391 bits (1005), Expect = e-106,   Method: Composition-based stats.
 Identities = 98/409 (23%), Positives = 175/409 (42%), Gaps = 29/409 (7%)

Query: 15  RGFIHQISNPRELDILC-----SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
           RG + Q+ +  +L+            +    G+D TA  LH GH   +  +   Q+ GH+
Sbjct: 20  RG-VEQVISAADLERKLHQAAKENRPLRVKAGFDPTAPDLHLGHTVLVQKMKHFQELGHE 78

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
              L+G  T +IGDP+ + E+R+ +  +E+  N E  K      +     +    ++ N 
Sbjct: 79  IYFLIGDFTGMIGDPTGKSETRKPLTPEEVAANAETYKEQVFKILDPARTR----VVFNS 134

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
            WL  +   D++R + S  +V RML  E  + R   E+++   EF Y ++Q YD V LA 
Sbjct: 135 VWLDKLSPRDMIR-LASQLTVARMLEREDFKQRFVNEKAIGIHEFMYPLIQGYDSVALAA 193

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLN 248
           +    +++GG+DQ  N++ G DL           LT PLL    G  KM K+L   I + 
Sbjct: 194 D----VELGGTDQLFNLLTGRDLQRVWGQEPQVVLTMPLLEGLDGVNKMSKSLDNYIGIT 249

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAKKIIATE 305
           +      + +    ++ D  +  + + L+ L   EI  + +            K+ +A E
Sbjct: 250 ESAD---DIYGKTLSMPDDLMFRYYELLSDLSRVEIADLQQGVSGGKLHPKAVKQRLARE 306

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           +    +    A +A       F      + +P ++++         L  L+V AG    T
Sbjct: 307 LVARFYDEPAARRAEDNFERVFKQHQAPEDVPELTLAAG--GEPCWLPRLLVDAGLVKGT 364

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            EARR +K  A+ I+   ++++   +        G + L  GK+     
Sbjct: 365 GEARRLIKQRAVSIDGEKVADDSATVATS-----GEVLLKVGKRRFCRV 408


>gi|297171491|gb|ADI22491.1| tyrosyl-tRNA synthetase [uncultured gamma proteobacterium
           HF0500_07A21]
          Length = 401

 Score =  391 bits (1005), Expect = e-106,   Method: Composition-based stats.
 Identities = 98/406 (24%), Positives = 180/406 (44%), Gaps = 22/406 (5%)

Query: 15  RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLM 74
           RG    +     ++ L +   +   +G+D TA  LH GH   +  +   Q  GH+ I L+
Sbjct: 15  RGAEEILVEAELIERLETGKPLRVKVGFDPTAPDLHLGHTVLINKMRQFQDLGHEIIFLI 74

Query: 75  GGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCS 134
           G  T +IGDPS ++ +R  +  +EI +N    K      +         ++  N  W   
Sbjct: 75  GDFTGMIGDPSGKNATRPALSPEEIDQNALTYKEQVFKILDPDKT----IVDFNSRWGNE 130

Query: 135 IKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCR 194
           +    ++R + S ++V RML  +   +R +  Q ++  EF Y ++Q YD V L  +    
Sbjct: 131 LGAEGMIR-LASRYTVARMLERDDFSTRYRDSQPIAVHEFLYPLMQGYDSVALKAD---- 185

Query: 195 LQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTS 253
           +++GG+DQ  N++ G +L ++        LT PLL    G  KM K+L  ++ + +   S
Sbjct: 186 VELGGTDQKFNLLVGRELQKQYGLEPQIVLTVPLLEGLDGVQKMSKSLGNSVGITE---S 242

Query: 254 PYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEITTMVH 311
           P   +    +I D  +  + + L+  P+++I   +     G    + K  +A EI    H
Sbjct: 243 PVEMYGKLMSISDELMWRYFELLSFRPLTDIRGLQEEVAAGANPRDIKFQLAHEIVERFH 302

Query: 312 GREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRH 371
              +A KA  + +  F        +  + +  D   + M +  +I  AG A ST+E  R 
Sbjct: 303 SPSDAVKAHQSFVSQFQRGEIPDDIAEVDV--DNQGKDMQVANVIKSAGLAGSTSEVYRL 360

Query: 372 LKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           +   A++I+   +++ KL IK        ++    GK+      + 
Sbjct: 361 MAQGAVRIDGERVNDRKLTIKT-----GVSVLFQVGKRRFARIRVT 401


>gi|317484756|ref|ZP_07943656.1| tyrosyl-tRNA synthetase [Bilophila wadsworthia 3_1_6]
 gi|316924008|gb|EFV45194.1| tyrosyl-tRNA synthetase [Bilophila wadsworthia 3_1_6]
          Length = 398

 Score =  391 bits (1005), Expect = e-106,   Method: Composition-based stats.
 Identities = 96/411 (23%), Positives = 177/411 (43%), Gaps = 27/411 (6%)

Query: 11  ILSERGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
            L +RG I  + +  EL     +G  +T   G+D TA  LH GH   +  L   Q+ GH+
Sbjct: 9   QLIKRG-ITNLIDEGELRKKLERGKPLTVKAGFDPTAPDLHLGHTVLIHKLRHFQELGHR 67

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
            + L+G  T  IGDPS R  +R  + ++++  N E  K      +         ++  N 
Sbjct: 68  VVFLIGDFTGRIGDPSGRSATRPPLTTEQVIANAETYKEQVFKILD----PEKTVVEFNS 123

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
            WL      D +R +GS +++ RM+  +    R +    ++  E  Y ++Q YD V L  
Sbjct: 124 RWLNDFTAADFIR-LGSRYTLARMMERDDFAKRYRENTPIALHELLYPLMQGYDSVALKA 182

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLN 248
           +    ++MGG+DQ  N++ G  L  +        LT PLL    G  KM K+    I +N
Sbjct: 183 D----VEMGGTDQTFNLLVGRTLMGQYDLEPQCILTVPLLEGLDGVRKMSKSYGNYIGIN 238

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAKKIIATE 305
           +      + +    ++ D  +  + + +++  + +I  + K   +      +AK+ +A E
Sbjct: 239 EPAA---DQFGKAMSVSDDLMWRYYELISSKSLDDIAALKKDVEEGRLHPKKAKEALAYE 295

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           I    HG ++A++A       F         P  +    E S+       +  +G A S 
Sbjct: 296 IVARYHGEDQAQEALQGFNSVFADGGIPDDAPEFACEHGEASKPPVF---LTDSGLAASR 352

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            EA+R +K  ++ ++     + +  ++       G+  +  GKK  +   +
Sbjct: 353 GEAKRLIKQGSLSLDGERCDDAETPLEP------GSYVVKLGKKRFLRLTV 397


>gi|152999747|ref|YP_001365428.1| tyrosyl-tRNA synthetase [Shewanella baltica OS185]
 gi|151364365|gb|ABS07365.1| tyrosyl-tRNA synthetase [Shewanella baltica OS185]
          Length = 397

 Score =  391 bits (1005), Expect = e-106,   Method: Composition-based stats.
 Identities = 99/417 (23%), Positives = 180/417 (43%), Gaps = 26/417 (6%)

Query: 6   SDFLSILSE--RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           +D   +L+E  RG    +     L+ L     +   +G D TA  +H GH   L  L   
Sbjct: 2   ADLDQVLAEIRRGTDEILLEADLLEKLKEGRPLRIKLGADPTAPDIHLGHTVILNKLRLF 61

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q+ GH+ I L+G  T ++GDPS ++ +R  +  +++  N E  K      +     +   
Sbjct: 62  QELGHEVIFLIGDFTGMVGDPSGKNSTRPPLTREQVLANAETYKEQVYKILDPVKTR--- 118

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            +  N +WL  +    ++R + S  +V RM+  +  + R    QS++  EF Y +LQ YD
Sbjct: 119 -IEFNSSWLEPLGAAGMIR-LASKQTVARMMERDDFKKRYASGQSIAIHEFMYPLLQGYD 176

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLS 242
            V L  +    +++GG+DQ  N++ G +L +         +  PLL    G  KM K+  
Sbjct: 177 SVALQAD----VELGGTDQKFNLLMGRELQKAEGQKPQAVIMMPLLEGLDGVKKMSKSAH 232

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKK 300
             I +++        +    +I D  +  + + L+  P++EI++  +    G    + K 
Sbjct: 233 NYIGVSEPAN---EMFGKLMSISDDLMWRYFELLSFRPLAEIEQFKQDVANGSNPRDIKI 289

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
            +A EI T  H    AE A  A ++     +    +  I +   E   G+ +  L+  A 
Sbjct: 290 ALAKEIITRFHDEASAESAHQAFVDR-AKGMIPDDIEEIELVAGE---GIAIANLLKDAD 345

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
              ST+EA R +K  A+K++   + + ++ +               GK+      L 
Sbjct: 346 LVASTSEAMRMIKQGAVKMDGEKLDDSRMTLSA-----GTVAVFQVGKRKFAKVTLV 397


>gi|167627820|ref|YP_001678320.1| tyrosyl-tRNA synthetase [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
 gi|167597821|gb|ABZ87819.1| tyrosyl-tRNA synthetase [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
          Length = 396

 Score =  391 bits (1005), Expect = e-106,   Method: Composition-based stats.
 Identities = 98/417 (23%), Positives = 177/417 (42%), Gaps = 27/417 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           MP  +      + +RG    +     +  L     +    G D TA  +H GH   +  L
Sbjct: 1   MPTIQQTL--EIIKRGADEVLIEEELVKKLEKNRPLVIKFGCDPTAPDIHLGHTVVINKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             LQ  GH+   L+G  T+ IGDP+ ++ +R  + ++E+  N E         +     K
Sbjct: 59  KQLQDLGHEIHFLIGDFTAQIGDPTGKNATRPPLTAEEVAANAETYTKQVFKILD----K 114

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
              ++  N  W   +   D+++ + S  +V RML  +    R K  QS+S  EF Y ++Q
Sbjct: 115 EKTVIRRNGDWFDKMSASDMIK-LASKSTVARMLERDDFSKRYKGGQSISIHEFLYPLVQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGK 239
            YD V +  +    +++GG+DQ  N++ G +L ++        +T PLL    G  KM K
Sbjct: 174 GYDSVAMNAD----IELGGTDQKFNLLMGRELQKQQGQEPQVIITMPLLEGLDGVKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINE 297
           +    I + +   +P + +    +I D  +  + + L+   +  I   +     G    +
Sbjct: 230 SSQNYIGIEE---TPNDMFGKVMSISDELMWRYYELLSFKSLDTIANLKQDVANGTNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K  +A E+    H +E+AE A    ++ F  +          I+  E+++ + +  L+ 
Sbjct: 287 IKIELAKELIERFHSKEDAESAHQDFIQRFQKNQIPDD-----INVVELNQELPIANLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +AG   ST+EA R +K  A+KI+     + K       F          GK+     
Sbjct: 342 EAGLVASTSEAIRMIKQGAVKIDGEKAEDNKAI-----FGKGTENVFQVGKRKFAKV 393


>gi|119472227|ref|ZP_01614406.1| Tyrosyl-tRNA synthetase II [Alteromonadales bacterium TW-7]
 gi|119445045|gb|EAW26340.1| Tyrosyl-tRNA synthetase II [Alteromonadales bacterium TW-7]
          Length = 399

 Score =  391 bits (1005), Expect = e-106,   Method: Composition-based stats.
 Identities = 95/407 (23%), Positives = 177/407 (43%), Gaps = 23/407 (5%)

Query: 15  RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLM 74
           RG    +     ++ L S   +    G+D TA  LH GH   +  +   Q  GH+ I L+
Sbjct: 12  RGAEEILIEDELVEKLKSGKKLKIKAGFDPTAPDLHLGHTVLINKMKTFQDLGHEVIFLI 71

Query: 75  GGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCS 134
           G  T +IGDP+ ++ +R+ +  +++  N E  K      +          +  N TW+  
Sbjct: 72  GDFTGMIGDPTGKNVTRKPLTREDVLANAETYKEQVFKILDPAKT----TVAFNSTWMEK 127

Query: 135 IKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCR 194
           +    +++ + +  +V RML  +  + R    Q ++  EF Y ++Q +D V L  +    
Sbjct: 128 LGAAGMIK-LAANQTVARMLERDDFKKRYNGGQPIAIHEFLYPLVQGWDSVALESD---- 182

Query: 195 LQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTS 253
           +++GG+DQ  N++ G +L +         L  PLL    G  KM K+L   I +     +
Sbjct: 183 VELGGTDQRFNLLMGRELQKVEGQKPQTVLMMPLLEGTDGVQKMSKSLGNYIGIT---DA 239

Query: 254 PYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATEITTMVH 311
           P + +    +I D  +  +   L+ L + +I    +   QG    + K  +A E+    H
Sbjct: 240 PNDMFGKVMSISDVLMWRYYDLLSGLSIEQIAAQKERVEQGTNPRDIKIELAKELIARFH 299

Query: 312 GREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRH 371
             E+A+ A    ++ F        +P ++++  E    + +  L+ +A    ST+EA R 
Sbjct: 300 SEEDAQAAHNDFIQRFQKKALPDEIPELTVTIAE--DTILIANLLKEANLVASTSEAMRM 357

Query: 372 LKSNAIKINN-SIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           +K  A+K+N    I++ KL+I               GK+      + 
Sbjct: 358 IKQGAVKLNGEEKITDTKLEIA-----KGTTAIYQVGKRKFANITVA 399


>gi|15606818|ref|NP_214198.1| tyrosyl-tRNA synthetase [Aquifex aeolicus VF5]
 gi|6226204|sp|O67632|SYY_AQUAE RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|2984054|gb|AAC07595.1| tyrosyl tRNA synthetase [Aquifex aeolicus VF5]
          Length = 392

 Score =  391 bits (1004), Expect = e-106,   Method: Composition-based stats.
 Identities = 100/382 (26%), Positives = 173/382 (45%), Gaps = 24/382 (6%)

Query: 34  GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRM 93
             +    G+D TA  LH GH+  L  L   Q+ GH+   ++G  T++IGDP+ R ++R  
Sbjct: 31  RPLRVKAGFDPTAPDLHLGHVVLLQKLRQFQQLGHEVFFIIGDFTAMIGDPTGRSQTRPP 90

Query: 94  MRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRM 153
           +  +++ EN +  +      +          ++ N TWL  +    L+ E+ + ++V RM
Sbjct: 91  LSREQVLENAKTYEHQVFKVLI----PEKTTVVFNSTWLEELGTKGLI-ELCAKYTVARM 145

Query: 154 LSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLG 213
           L  E    R K    +   EF Y +LQAYD V +  +    +++GG+DQ  N++ G D+ 
Sbjct: 146 LEREDFSKRFKEGIPIYIHEFIYPLLQAYDSVAIKAD----VEIGGTDQKFNLLIGRDIQ 201

Query: 214 ERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSF 272
                     +T PLL    G  KM K+    + + ++   P   +    +I D  +  +
Sbjct: 202 REYGQEPQVCITLPLLVGTDGVRKMSKSYGNYVGITED---PKTMFAKIMSIPDEIMWDW 258

Query: 273 AKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIH 332
              LT     EI++M +       EAKK++A  I    H  EEA KA     + F     
Sbjct: 259 FLLLTDYNKEEIEKMRREM--HPMEAKKLLAFTIVKRFHSEEEARKAKEWWEKTFSQREF 316

Query: 333 SQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
            +  P + ++     + +  +  +VK G   S NEARR ++   +KIN   +++   +I+
Sbjct: 317 PEDAPLVKLN----EKKLRAVDFLVKIGAVKSKNEARRVIQGGGLKINGEKVTDPNTEIE 372

Query: 393 LQDFDSTGNIKLSFGKKNHIIC 414
           +      G +K+  GKK     
Sbjct: 373 I-----NGELKVKVGKKKFYRV 389


>gi|297170882|gb|ADI21900.1| tyrosyl-tRNA synthetase [uncultured gamma proteobacterium
           HF0130_26L16]
          Length = 405

 Score =  391 bits (1004), Expect = e-106,   Method: Composition-based stats.
 Identities = 106/417 (25%), Positives = 186/417 (44%), Gaps = 24/417 (5%)

Query: 5   KSDFLSILSE--RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
           KS F  +L+E  RG    +     L+ L S   +   +G+D TA  LH GH   +  +  
Sbjct: 7   KSAFQEVLAELKRGVEEMLLEEELLERLASNRPLRIKVGFDPTAPDLHLGHTVIINKMRQ 66

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD 122
            Q+ GH+ + L+G  T +IGDPS ++ +R  + ++EI+ N    K      +     +  
Sbjct: 67  FQELGHEVVFLIGDFTGMIGDPSGKNVTRPPLTTEEIESNAVTYKAQVFRILDPDKTQ-- 124

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
             +  N  W   +    ++R + S  +V RML  +    R K  Q ++  EF Y ++Q Y
Sbjct: 125 --VEFNSKWCSELGAEGIIR-LASRHTVARMLERDDFSKRYKSGQPIAIHEFLYPLMQGY 181

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTL 241
           D V L  +    ++MGG+DQ  N++ G +L ++   P    +T PLL    G  KM K+L
Sbjct: 182 DSVALKTD----VEMGGTDQKFNLLVGRELQKQYGQPSQVVITLPLLEGLDGVQKMSKSL 237

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAK 299
              + +     +P + +    +I D  +  + + L+   + EI+++ +    G    + K
Sbjct: 238 GNIVGIT---DAPDDMFGKLMSISDDLMWRYFELLSFKSLPEIEKLRESVGSGANPRDVK 294

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKA 359
             +A EI    H     +KA    +E F        +   ++  D    G+G+ + I +A
Sbjct: 295 FELAREIVDRFHAPGGGKKAEQRFVERFSQGSVPDDLEEKALLSD--GDGLGIASAIKQA 352

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           G ATST+EA R +K  A++     + + K  +            L  GK+      +
Sbjct: 353 GLATSTSEAIRLIKQGAVRFAGERLEDPKTVLAP-----GTKGVLQVGKRRIAKVRI 404


>gi|94265281|ref|ZP_01289039.1| Tyrosyl-tRNA synthetase, class Ib [delta proteobacterium MLMS-1]
 gi|93454215|gb|EAT04533.1| Tyrosyl-tRNA synthetase, class Ib [delta proteobacterium MLMS-1]
          Length = 411

 Score =  391 bits (1004), Expect = e-106,   Method: Composition-based stats.
 Identities = 99/409 (24%), Positives = 175/409 (42%), Gaps = 29/409 (7%)

Query: 15  RGFIHQISNPRELDILC-----SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
           RG + Q+ +  +L+            +    G+D TA  LH GH   +  +   Q+ GH+
Sbjct: 20  RG-VEQVISAADLERKLHQAAKENRPLRVKAGFDPTAPDLHLGHTVLVQKMKHFQELGHE 78

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
              L+G  T +IGDP+ + E+R+ +  +E+  N E  K      +     +    ++ N 
Sbjct: 79  IYFLIGDFTGMIGDPTGKSETRKPLTPEEVTANAETYKEQVFKILDPARTR----VVFNS 134

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
            WL  +   D++R + S  +V RML  E  + R   E+++   EF Y ++Q YD V LA 
Sbjct: 135 VWLDKLSPRDMIR-LASQLTVARMLEREDFKQRFVNEKAIGIHEFMYPLIQGYDSVALAA 193

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLN 248
           +    +++GG+DQ  N++ G DL           LT PLL    G  KM K+L   I + 
Sbjct: 194 D----VELGGTDQLFNLLTGRDLQRVWGQEPQVVLTMPLLEGLDGVNKMSKSLDNYIGIT 249

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAKKIIATE 305
           +      + +    ++ D  +  + + L+ L   EI  + +  G         K+ +A E
Sbjct: 250 ESAD---DIYGKTLSMPDDLMFRYYELLSDLSQLEIADLQQGVGSGKLHPKAVKQRLARE 306

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           +    +    A +A       F      + +P +++          L  L+V AG    T
Sbjct: 307 LVARFYDEPAARRAEDNFERVFKQHQAPEDVPELTLVAG--GEPCWLPRLLVDAGLVKGT 364

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            EARR +K  A+ I+   ++++   +        G + L  GK+     
Sbjct: 365 GEARRLIKQRAVSIDGEKVADDSATVATS-----GEVLLKVGKRRFCRV 408


>gi|330980904|gb|EGH79007.1| tyrosyl-tRNA synthetase [Pseudomonas syringae pv. aptata str. DSM
           50252]
          Length = 399

 Score =  391 bits (1004), Expect = e-106,   Method: Composition-based stats.
 Identities = 104/409 (25%), Positives = 173/409 (42%), Gaps = 24/409 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG    +     ++ L     +    G+D TA  LH GH   +  L   Q  GH+ I
Sbjct: 10  LIKRGADELLVEAELVEKLKRGQPLRIKAGFDPTAPDLHLGHTVLINKLRQFQDLGHQII 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T +IGDPS +  +R  +  +++ +  E  K      +     +    +  N TW
Sbjct: 70  FLIGDFTGMIGDPSGKSATRPPLTREQVLDYAETYKSQVFKILDPAKTE----VAFNSTW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +  +   D +R + S ++V RML  +    R K  QS++  EF Y ++Q YD V L  + 
Sbjct: 126 MDQLSPADFIR-LSSQYTVARMLERDDFDKRYKSNQSIAIHEFLYPLVQGYDSVALKAD- 183

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G +L           LT PLL    G  KM K+L   + + + 
Sbjct: 184 ---VELGGTDQKFNLLMGRELQRAYGQEPQCILTMPLLEGLDGVKKMSKSLGNYVGIQE- 239

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEITT 308
             +P   +    +I D+ +  + + L+   M EID  +     G    + K  +A E+  
Sbjct: 240 --APGIMYSKLVSIPDSLMWRYFELLSFRSMEEIDGLKADCEAGANPRDIKIKLAEELVA 297

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
             HG E A  A  +A            +P IS++  E    M +  ++ KAG   +   A
Sbjct: 298 RFHGEEAAANAHRSAGNRMKEGELPDDLPEISVAAAE---DMPISAVLNKAGLVKNAAVA 354

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           R  L S  ++I+  ++ +     KL             GKK      L 
Sbjct: 355 RDLLASGGVRIDGEVV-DRSFVFKL-----GPTHVCQAGKKAFGRVMLV 397


>gi|167629889|ref|YP_001680388.1| tyrosyl-tRNA synthetase [Heliobacterium modesticaldum Ice1]
 gi|167592629|gb|ABZ84377.1| tyrosyl-tRNA synthetase [Heliobacterium modesticaldum Ice1]
          Length = 417

 Score =  391 bits (1004), Expect = e-106,   Method: Composition-based stats.
 Identities = 105/415 (25%), Positives = 180/415 (43%), Gaps = 27/415 (6%)

Query: 12  LSERGFIHQISNPRELDIL----CSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           L  RG    +     +  L     ++  +   +G D TA  +H GH   L  L   Q  G
Sbjct: 21  LIRRGTAEIVPEEDLVKKLKDAIVNRRPLRVKLGLDPTAPDIHLGHTVVLRKLRDFQDLG 80

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+ + ++G  T  +GDPS + E+R+ +  +E+  N    K      +     +    M  
Sbjct: 81  HQVVIVIGDFTGRVGDPSGKSETRKQLTEEEVNRNAATYKEQIFKVLDPAKTE----MTF 136

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  + + D+L ++ + ++V RML  +    R++    +   E  Y ++Q YD V L
Sbjct: 137 NSHWLQPLNFADIL-QLAAKYTVARMLERDDFSKRMRENLPIGVHELFYPLMQGYDSVAL 195

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIW 246
             +    +++GG+DQ  N++ G  L +        AL  P+L    G  KM K+L   I 
Sbjct: 196 RAD----VELGGTDQKFNLLVGRVLQKEYGQEPQVALMMPILEGLDGVNKMSKSLGNYIG 251

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSE---IDRMAKLQGKEINEAKKIIA 303
           +N+   SP   +    +I DA +V + + +T +   E   I    K       +AK  +A
Sbjct: 252 VNE---SPREIYGKTMSIADALMVRYFELVTRVSAEEIQSIAEGLKSGALHPRDAKMRLA 308

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFA 362
            EI  + HG E A+ A    +  F        +P   +  + +  G +GL+  +V +G A
Sbjct: 309 REIVALFHGNEAAQAAQDEFINIFQKRELPDEIPDFIVPAEHIQDGKVGLVKALVLSGLA 368

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            S  EARR +   A+K++N  I +    I ++         L  GK+  +   L 
Sbjct: 369 ASNGEARRKITEGAVKVDNETIKDFNTMIPVE------GTLLRLGKRKFVRLLLA 417


>gi|120599833|ref|YP_964407.1| tyrosyl-tRNA synthetase [Shewanella sp. W3-18-1]
 gi|146292231|ref|YP_001182655.1| tyrosyl-tRNA synthetase [Shewanella putrefaciens CN-32]
 gi|120559926|gb|ABM25853.1| tyrosyl-tRNA synthetase [Shewanella sp. W3-18-1]
 gi|145563921|gb|ABP74856.1| tyrosyl-tRNA synthetase [Shewanella putrefaciens CN-32]
 gi|319425531|gb|ADV53605.1| tyrosyl-tRNA synthetase [Shewanella putrefaciens 200]
          Length = 397

 Score =  391 bits (1004), Expect = e-106,   Method: Composition-based stats.
 Identities = 99/417 (23%), Positives = 183/417 (43%), Gaps = 26/417 (6%)

Query: 6   SDFLSILSE--RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           +D   +L+E  RG    +     L+ L     +   +G D TA  +H GH   L  L   
Sbjct: 2   ADLDQVLAEIRRGTDEILLESDLLEKLKEGRPLRIKLGADPTAPDIHLGHTVILNKLRLF 61

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q+ GH+ I L+G  T ++GDPS ++ +R  +  +++  N E  K      +     +   
Sbjct: 62  QELGHEVIFLIGDFTGMVGDPSGKNSTRPPLTREQVLANAETYKEQVYKILDPAKTR--- 118

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            +  N +WL  +    ++R + S  +V RM+  +  + R    QS++  EF Y +LQ YD
Sbjct: 119 -IEFNSSWLEPLGAAGMIR-LASQQTVARMMERDDFKKRYASGQSIAIHEFMYPLLQGYD 176

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLS 242
            V L  +    +++GG+DQ  N++ G +L +         +  PLL    G  KM K+  
Sbjct: 177 SVALKAD----VELGGTDQKFNLLMGRELQKAEGQKPQAVIMMPLLEGLDGVKKMSKSAH 232

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKK 300
             I +++        +    +I D  +  + + L+  P++EI++  +  + G    + K 
Sbjct: 233 NYIGVSEPAN---EMFGKLMSISDDLMWRYFELLSFRPLAEIEQFKQDVVNGANPRDIKI 289

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
            +A EI T  H    AE A  A ++     +    +  I ++  E   G+ +  L+  A 
Sbjct: 290 ALAKEIITRFHDAASAESAHQAFVDR-AKGMIPDDIEAIELAAGE---GIAIANLLKDAD 345

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
              ST+EA R +K  A+K++   + + ++ +      +        GK+      L 
Sbjct: 346 LVASTSEAMRMIKQGAVKMDGEKLEDSRMTL-----FAGTVAVFQVGKRKFAKVTLV 397


>gi|291278546|ref|YP_003495381.1| tyrosyl-tRNA synthetase [Deferribacter desulfuricans SSM1]
 gi|290753248|dbj|BAI79625.1| tyrosyl-tRNA synthetase [Deferribacter desulfuricans SSM1]
          Length = 400

 Score =  391 bits (1004), Expect = e-106,   Method: Composition-based stats.
 Identities = 103/391 (26%), Positives = 174/391 (44%), Gaps = 27/391 (6%)

Query: 30  LCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDE 89
           L     +    G+D TA  LH GH   +  L   Q  GH+ I L+G  T +IGDP+ + E
Sbjct: 32  LKEGKPLRVKAGFDPTAPDLHLGHTVLIQKLKHFQDLGHQVIFLIGDFTGMIGDPTGKSE 91

Query: 90  SRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFS 149
           +R+ +  +E+ +N E  K      +     +    +  N  W+  +   D+++ + S ++
Sbjct: 92  TRKALSREEVLKNAETYKEQVFKILDPEKTE----VAFNSQWMDKMTSYDMIK-LASKYT 146

Query: 150 VNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICG 209
           V RML  +    R    + +S  EF Y ++Q YD V L  +    +++GG+DQ  N++ G
Sbjct: 147 VARMLERDDFSKRFSTNKPISIHEFLYPLVQGYDSVALRAD----VELGGTDQKFNLLVG 202

Query: 210 IDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDAD 268
            DL          A+T P+L    G  KM K+L   + + ++   P+  +    +I D  
Sbjct: 203 RDLQRDYGQEPQIAITMPILEGLDGVQKMSKSLGNYVGITED---PFTMFSKIMSISDEL 259

Query: 269 VVSFAKRLTTLPMSEIDRMAK--LQGK-EINEAKKIIATEITTMVHGREEAEKAATAAME 325
           +  +   L+     EI+RM      GK    E KK +A EI T  H   +A++A     +
Sbjct: 260 MFRYYLLLSDKSEDEINRMKSDIENGKLHPMEVKKALAAEIVTRFHSTNDAKEAREKFEK 319

Query: 326 CFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIIS 385
            F        +P  ++      +G+ L+ +I    F +S +E RR     AI IN + + 
Sbjct: 320 LFSKKEIPDDLPEYTL-----EKGLKLIDIIKNINFVSSNSEIRRLASQGAIYINGNRVE 374

Query: 386 NEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +    I+ ++F       L  GKK      L
Sbjct: 375 DIYKIIEDEEF------VLKVGKKKFAKIVL 399


>gi|262274957|ref|ZP_06052768.1| tyrosyl-tRNA synthetase [Grimontia hollisae CIP 101886]
 gi|262221520|gb|EEY72834.1| tyrosyl-tRNA synthetase [Grimontia hollisae CIP 101886]
          Length = 395

 Score =  391 bits (1004), Expect = e-106,   Method: Composition-based stats.
 Identities = 100/420 (23%), Positives = 184/420 (43%), Gaps = 28/420 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M + ++    I  +RG    I     +  L     +   +G D TA  +H GH   +  L
Sbjct: 1   MASIEAALAEI--KRGVEELIPEEELIAKLKENRPLRIKLGADPTAPDIHLGHTVIMNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+ I L+G  T+++GDPS ++ +R  +  +++  N E  K      +      
Sbjct: 59  RAFQELGHEVIFLIGDYTAMVGDPSGKNTTRPPLTREQVLANAETYKEQIFKILD----P 114

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N +WL  +    ++R + +  +V RML  +  + R    Q ++  EF Y +LQ
Sbjct: 115 NKTRVEFNSSWLGELGTDGMIR-LAASSTVARMLERDDFKKRYSNNQPIAIHEFIYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGK 239
            YD V L    +  +++GG+DQ  N++ G +L ++   P+   +T PLL    G  KM K
Sbjct: 174 GYDSVAL----EADVELGGTDQKFNLLMGRELQKQNGQPQQVVITMPLLVGLDGVKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINE 297
           + +  I ++    +P   +    +I D  + ++ + L+  P+ EI+  +     G+   +
Sbjct: 230 SANNYIGIS---DAPNEMFGKIMSISDDLMWNYYELLSFRPLEEIEGLKQEIANGRNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A EI    H   +A+ A    +  F        MP  S      ++G+ +  L+ 
Sbjct: 287 VKILLAKEIIARFHSEADADAAEADFINRFQKGAMPDEMPEFS-----FAQGVAIANLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            A    ST++A R ++  A+KI+   + + KL          G      GK+      L 
Sbjct: 342 DADLVGSTSDAMRMIRQGAVKIDGEKVDDTKLVPAA------GTAVYQVGKRKFARITLA 395


>gi|71737953|ref|YP_272986.1| tyrosyl-tRNA synthetase [Pseudomonas syringae pv. phaseolicola
           1448A]
 gi|115305817|sp|Q48NN3|SYY_PSE14 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|71558506|gb|AAZ37717.1| tyrosyl-tRNA synthetase [Pseudomonas syringae pv. phaseolicola
           1448A]
          Length = 403

 Score =  391 bits (1004), Expect = e-106,   Method: Composition-based stats.
 Identities = 103/409 (25%), Positives = 173/409 (42%), Gaps = 24/409 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG    +     ++ L     +    G+D TA  LH GH   +  L   Q  GH+ I
Sbjct: 10  LIKRGADELLVEAELVEKLKRGQPLRIKAGFDPTAPDLHLGHTVLINKLRQFQDLGHQII 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T +IGDPS +  +R  +  +++ +  E  K      +     +    +  N TW
Sbjct: 70  FLIGDFTGMIGDPSGKSATRPPLTREQVLDYAETYKSQVFKILDPAKTE----VAFNSTW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +  +   D +R + S ++V RML  +    R K  QS++  EF Y ++Q YD V L  + 
Sbjct: 126 MDKLSPADFIR-LSSQYTVARMLERDDFDKRYKSNQSIAIHEFLYPLVQGYDSVALKAD- 183

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G +L           LT PLL    G  KM K+L   + + + 
Sbjct: 184 ---VELGGTDQKFNLLMGRELQRAYGQEPQCILTMPLLEGLDGVKKMSKSLGNYVGIQE- 239

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEITT 308
             +P   +    +I D+ +  + + L+   M EI+  +     G    + K  +A E+  
Sbjct: 240 --APGIMYSKLVSIPDSLMWRYFELLSFRSMEEINGLKADCEAGANPRDIKIKLAEELVA 297

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
             HG E A  A  +A            +P IS++  E    M +  ++ KAG   +   A
Sbjct: 298 RFHGEEAAANAHRSAGNRMKEGELPDDLPEISVAAIE---DMPISAVLNKAGLVKNAAVA 354

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           R  L S  ++I+  ++ +     KL             GKK      L 
Sbjct: 355 RDLLASGGVRIDGEVV-DRGFVFKL-----GATHVCQAGKKAFGRVTLV 397


>gi|169656595|ref|YP_001428451.2| tyrosyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FTNF002-00]
 gi|164551663|gb|ABU61495.2| tyrosyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FTNF002-00]
          Length = 413

 Score =  391 bits (1004), Expect = e-106,   Method: Composition-based stats.
 Identities = 97/417 (23%), Positives = 180/417 (43%), Gaps = 27/417 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M + K      + +RG    +     +  L     +    G D TA  +H GH   +  L
Sbjct: 18  MSSIKETL--EIIKRGADEVLIEEELIKKLQKHKPLIIKFGCDPTAPDIHLGHTVVINKL 75

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             LQ  GH+   L+G  T+ IGDP+ ++ +R  + ++E+  N E         +     K
Sbjct: 76  KQLQDLGHEIHFLIGDFTAQIGDPTGKNATRPPLTTEEVAANAETYTKQVFKILD----K 131

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
              ++  N  W   +   ++++ + S  +V RML  +    R K  QS+S  EF Y ++Q
Sbjct: 132 DKTVICRNGDWFNKMSASEMIK-LASKSTVARMLERDDFSKRYKGGQSISIHEFLYPLVQ 190

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGK 239
            YD V +  +    +++GG+DQ  N++ G +L ++        +T PLL    G  KM K
Sbjct: 191 GYDSVAMNAD----IELGGTDQKFNLLMGRELQKQQGQEPQVIITMPLLEGLDGVKKMSK 246

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINE 297
           +    I + +        +    +I D  +  + + L+   +  I ++ +    G    +
Sbjct: 247 SSQNYIGIEEPAN---EIFGKIMSISDELMWRYYELLSFKSLENIAKLKQDVAAGANPRD 303

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K  +A E+    H +E+AE A    ++ F  +          I+  E+++ + +  L+ 
Sbjct: 304 IKIELAKELIERFHSKEDAESAHQDFIQRFQKNQIPDD-----INVVELNQELPIANLLK 358

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +AG   ST+EA R ++  A+KI+   +S+ K+      F    N     GK+     
Sbjct: 359 EAGLVASTSEANRMIQQGAVKIDGEKLSDAKII-----FAKGTNNVFQVGKRKFAKI 410


>gi|298530310|ref|ZP_07017712.1| tyrosyl-tRNA synthetase [Desulfonatronospira thiodismutans ASO3-1]
 gi|298509684|gb|EFI33588.1| tyrosyl-tRNA synthetase [Desulfonatronospira thiodismutans ASO3-1]
          Length = 400

 Score =  390 bits (1003), Expect = e-106,   Method: Composition-based stats.
 Identities = 105/410 (25%), Positives = 183/410 (44%), Gaps = 26/410 (6%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG +  +S    L  +  +  +    G+D TA  LH GH   +  L   Q+ GH  +
Sbjct: 11  LIRRGSVEIVSESELLKKMDRKKPLRVKAGFDPTAPDLHLGHTVLIQKLKHFQELGHHVL 70

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T +IGDPS + E+R+ +  QE+ +N E  K      +     +    ++ N TW
Sbjct: 71  FLIGDFTGMIGDPSGKSETRKKLTRQEVIQNAETYKRQIFRILHPEKTE----LVFNSTW 126

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +      D + E+ S ++V RM+  +    R +  +S++  EF Y ++Q YD VEL  + 
Sbjct: 127 MDKFHAADFV-ELCSRYTVARMMERDDFDKRFRENRSIAVHEFLYPLIQGYDSVELKAD- 184

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G DL           LT P+L    G  KM K+L   + + + 
Sbjct: 185 ---VELGGTDQKFNLLVGRDLQREYGQEPQVILTVPILEGLDGVQKMSKSLDNYVGIEEP 241

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAKKIIATEIT 307
                + +    +I D  +  + + L+   +++I+ M +   +        K+ +A EIT
Sbjct: 242 AR---DMYGKLMSISDELMWRYFELLSDKNLNDIEAMRENVEQGRLHPKYCKEELAMEIT 298

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
              H R+ AEK        F      Q MP  S+S  E  R   L  ++V++    S +E
Sbjct: 299 ARFHDRQAAEKERENFNRVFSAHEMPQDMPEFSVSPAENKR---LADILVESRLCPSRSE 355

Query: 368 ARRHLKSNAIKI-NNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           A+R  +  A+ + N   +++ +           G   L  GKK  +   +
Sbjct: 356 AKRLCRQKAVGLYNGEKLTDPEAVF------GAGEYTLKVGKKRFLKLKV 399


>gi|320325937|gb|EFW81996.1| tyrosyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str.
           B076]
          Length = 403

 Score =  390 bits (1003), Expect = e-106,   Method: Composition-based stats.
 Identities = 103/409 (25%), Positives = 173/409 (42%), Gaps = 24/409 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG    +     ++ L     +    G+D TA  LH GH   +  L   Q  GH+ I
Sbjct: 10  LIKRGADELLVEAELVEKLKRGQPLRIKAGFDPTAPDLHLGHTVLINKLRQFQDLGHQII 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T +IGDPS +  +R  +  +++ +  E  K      +     +    +  N TW
Sbjct: 70  FLIGDFTGMIGDPSGKSATRPPLTREQVLDYAETYKSQVFKILDPAKTE----VAFNSTW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +  +   D +R + S ++V RML  +    R K  QS++  EF Y ++Q YD V L  + 
Sbjct: 126 MDKLSPADFIR-LSSQYTVARMLERDDFDKRYKSNQSIAIHEFLYPLVQGYDSVALKAD- 183

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G +L           LT PLL    G  KM K+L   + + + 
Sbjct: 184 ---VELGGTDQKFNLLMGRELQRAYGQEPQCILTMPLLEGLDGVKKMSKSLGNYVGIQE- 239

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEITT 308
             +P   +    +I D+ +  + + L+   M EI+  +     G    + K  +A E+  
Sbjct: 240 --APGIMYSKLVSIPDSLMWRYFELLSFRSMEEINGLKADCEAGANPRDIKIKLAEELVA 297

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
             HG E A  A  +A            +P IS++  E    M +  ++ KAG   +   A
Sbjct: 298 RFHGEEAAANAHRSAGNRMKEGELPDDLPEISVAAIE---DMPISAVLNKAGLVKNAAVA 354

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           R  L S  ++I+  ++ +     KL             GKK      L 
Sbjct: 355 RDLLASGGVRIDGEVV-DRGFVFKL-----GATHVCQAGKKAFGCVTLV 397


>gi|294636385|ref|ZP_06714772.1| tyrosine--tRNA ligase [Edwardsiella tarda ATCC 23685]
 gi|291090343|gb|EFE22904.1| tyrosine--tRNA ligase [Edwardsiella tarda ATCC 23685]
          Length = 281

 Score =  390 bits (1003), Expect = e-106,   Method: Composition-based stats.
 Identities = 121/274 (44%), Positives = 170/274 (62%), Gaps = 1/274 (0%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q 
Sbjct: 8   SNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQL 67

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +Q  +EKI+   + F+ +  G   A+ 
Sbjct: 68  AGHKPVALVGGATGLIGDPSFKASERKLNTEETVQGWVEKIRHQVAPFLDFDCGANSAIA 127

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYDF 184
            NN  W   +  +  LR+IG  FSVN+M++ E+V+ RL R+   +SF EF+Y +LQ YDF
Sbjct: 128 ANNYDWFGGMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDVGISFTEFSYNLLQGYDF 187

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L + +   LQ+GGSDQWGNI  GIDL  RL   +++ LT PL+T A GTK GKT  GA
Sbjct: 188 ASLNRMHGVELQIGGSDQWGNITSGIDLTRRLNQQQVWGLTVPLITKADGTKFGKTEGGA 247

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
           +WL+ + TSPY F+Q+W N  DADV  F K  T 
Sbjct: 248 VWLDPKKTSPYKFYQFWINTSDADVYRFLKFFTF 281


>gi|330985735|gb|EGH83838.1| tyrosyl-tRNA synthetase [Pseudomonas syringae pv. lachrymans str.
           M301315]
 gi|331011598|gb|EGH91654.1| tyrosyl-tRNA synthetase [Pseudomonas syringae pv. tabaci ATCC
           11528]
          Length = 398

 Score =  390 bits (1003), Expect = e-106,   Method: Composition-based stats.
 Identities = 103/409 (25%), Positives = 173/409 (42%), Gaps = 24/409 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG    +     ++ L     +    G+D TA  LH GH   +  L   Q  GH+ I
Sbjct: 10  LIKRGADELLVEAELVEKLKRGQPLRIKAGFDPTAPDLHLGHTVLINKLRQFQDLGHQII 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T +IGDPS +  +R  +  +++ +  E  K      +     +    +  N TW
Sbjct: 70  FLIGDFTGMIGDPSGKSATRPPLTREQVLDYAETYKSQVFKILDPAKTE----VAFNSTW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +  +   D +R + S ++V RML  +    R K  QS++  EF Y ++Q YD V L  + 
Sbjct: 126 MDRLSPADFIR-LSSQYTVARMLERDDFDKRYKSNQSIAIHEFLYPLVQGYDSVALKAD- 183

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G +L           LT PLL    G  KM K+L   + + + 
Sbjct: 184 ---VELGGTDQKFNLLMGRELQRAYGQEPQCILTMPLLEGLDGVKKMSKSLGNYVGIQE- 239

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEITT 308
             +P   +    +I D+ +  + + L+   M EI+  +     G    + K  +A E+  
Sbjct: 240 --APGIMYSKLVSIPDSLMWRYFELLSFRSMEEINGLKADCEAGANPRDIKIKLAEELVA 297

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
             HG E A  A  +A            +P IS++  E    M +  ++ KAG   +   A
Sbjct: 298 RFHGEEAAANAHRSAGNRMKEGELPDDLPEISVAAIE---DMPISAVLNKAGLVKNAAVA 354

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           R  L S  ++I+  ++ +     KL             GKK      L 
Sbjct: 355 RDLLASGGVRIDGEVV-DRGFVFKL-----GATHVCQAGKKAFGRVTLV 397


>gi|257483168|ref|ZP_05637209.1| tyrosyl-tRNA synthetase [Pseudomonas syringae pv. tabaci ATCC
           11528]
          Length = 403

 Score =  390 bits (1003), Expect = e-106,   Method: Composition-based stats.
 Identities = 103/409 (25%), Positives = 173/409 (42%), Gaps = 24/409 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG    +     ++ L     +    G+D TA  LH GH   +  L   Q  GH+ I
Sbjct: 10  LIKRGADELLVEAELVEKLKRGQPLRIKAGFDPTAPDLHLGHTVLINKLRQFQDLGHQII 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T +IGDPS +  +R  +  +++ +  E  K      +     +    +  N TW
Sbjct: 70  FLIGDFTGMIGDPSGKSATRPPLTREQVLDYAETYKSQVFKILDPAKTE----VAFNSTW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +  +   D +R + S ++V RML  +    R K  QS++  EF Y ++Q YD V L  + 
Sbjct: 126 MDRLSPADFIR-LSSQYTVARMLERDDFDKRYKSNQSIAIHEFLYPLVQGYDSVALKAD- 183

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G +L           LT PLL    G  KM K+L   + + + 
Sbjct: 184 ---VELGGTDQKFNLLMGRELQRAYGQEPQCILTMPLLEGLDGVKKMSKSLGNYVGIQE- 239

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEITT 308
             +P   +    +I D+ +  + + L+   M EI+  +     G    + K  +A E+  
Sbjct: 240 --APGIMYSKLVSIPDSLMWRYFELLSFRSMEEINGLKADCEAGANPRDIKIKLAEELVA 297

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
             HG E A  A  +A            +P IS++  E    M +  ++ KAG   +   A
Sbjct: 298 RFHGEEAAANAHRSAGNRMKEGELPDDLPEISVAAIE---DMPISAVLNKAGLVKNAAVA 354

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           R  L S  ++I+  ++ +     KL             GKK      L 
Sbjct: 355 RDLLASGGVRIDGEVV-DRGFVFKL-----GATHVCQAGKKAFGRVTLV 397


>gi|329124010|ref|ZP_08252557.1| tyrosine--tRNA ligase [Haemophilus aegyptius ATCC 11116]
 gi|327467435|gb|EGF12933.1| tyrosine--tRNA ligase [Haemophilus aegyptius ATCC 11116]
          Length = 395

 Score =  390 bits (1003), Expect = e-106,   Method: Composition-based stats.
 Identities = 109/419 (26%), Positives = 181/419 (43%), Gaps = 28/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M    +  L+ L  RG    +S    ++ L     +   +G D TA  +H GH   L  L
Sbjct: 1   MTDINT-VLAELK-RGTDEILSETDLIEKLKENRPLKVKLGADPTAPDIHLGHTVVLNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+   L+G  T ++GDPS ++ +R  +  +++  N E  K      +     K
Sbjct: 59  RQFQQLGHEVYFLIGDFTGMVGDPSGKNATRPPLSREDVLRNAETYKEQIYKILDPQKTK 118

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               ++ N  WL  +    ++R + S ++V RML  +  + R    Q ++  EF Y +LQ
Sbjct: 119 ----IVFNSEWLSKLGTEGMIR-LASNYTVARMLERDDFKKRFGNNQPIAIHEFIYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGK 239
            YD V L  +    +++GG+DQ  N++ G +L +        A+T PLL    G  KM K
Sbjct: 174 GYDSVALDAD----VELGGTDQKFNLLVGRELQKSAGKKPQVAITLPLLVGLDGEKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINE 297
           +L   I + +   +P + +    +I D  +  +   L+  P+SEI   +     GK   +
Sbjct: 230 SLGNYIGVTE---APSDMFGKVMSISDELMWDWYNLLSFRPLSEIAQLKSEVENGKNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A E+    H  E A  A    +  F        MP  + S +     +GL TL+ 
Sbjct: 287 VKILLAKELIARFHNEEAANAAEQEFINRFQKGAMPDEMPEFTFSGE-----IGLATLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +A    ST+EA R  +   +KIN   + N K      D    G      GK+      +
Sbjct: 342 EAALVPSTSEAIRSAQQGGVKINGEKVDNVK------DNAPKGTNVYQVGKRKFARVTI 394


>gi|56964522|ref|YP_176253.1| tyrosyl-tRNA synthetase [Bacillus clausii KSM-K16]
 gi|81365679|sp|Q5WEB8|SYY_BACSK RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|56910765|dbj|BAD65292.1| tyrosyl-tRNA synthetase 2 [Bacillus clausii KSM-K16]
          Length = 414

 Score =  390 bits (1003), Expect = e-106,   Method: Composition-based stats.
 Identities = 106/412 (25%), Positives = 185/412 (44%), Gaps = 30/412 (7%)

Query: 15  RGFIHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
           RG +  +           +       +   +G D +A  +H GH   L  L   Q+ GH 
Sbjct: 24  RGVVE-VVPKEAFREKIEKSVRTGKPLNIKLGMDPSAPDVHIGHTVVLQKLRQFQEYGHH 82

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
              L+G  T  IGDP+ + E+R+++  +++++N +     +   +     +    +L N 
Sbjct: 83  IQLLIGDFTGKIGDPTGKSETRKVLTDEQVKQNAQTYVEQYGKILDIEKTE----ILYNS 138

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
            WL  +K+ D+L+  G   +V RML  E    R K  Q +S  EF Y ++Q YD V +  
Sbjct: 139 RWLSELKFDDVLKLAG-QMTVARMLEREDFSKRYKTGQPISVHEFFYPLMQGYDSVAM-- 195

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLN 248
             +  +++GG+DQ  N++ G  L E     K   LT PL+    G  KM K+L+  I ++
Sbjct: 196 --ETDIEVGGTDQTFNLLMGRQLQEAYGKEKQVMLTLPLIEGLDGVRKMSKSLNNYIGID 253

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAKKIIATE 305
           +   +P   +    +I D  +V + K  T +PM EI+ + K          +AK  +  +
Sbjct: 254 E---APNEIFGKAMSIPDELMVKYYKLATDVPMDEIEALEKGLADGSVHPRDAKMRLGHK 310

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
              M HG+E A++A       F      + +P  S    E  + + L+ L+V     +S 
Sbjct: 311 FVEMYHGKEAADEAEQYFKTVFQKRALPEDIPVFSW---EGDKEVPLIDLLVTLNMQSSK 367

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            EARR ++   +KIN   I++    + ++D     N+ +  GK+      L 
Sbjct: 368 GEARRMIQGGGVKINEQKITDIHTVVSVED-----NMIVQVGKRKFAKLSLT 414


>gi|320331997|gb|EFW87933.1| tyrosyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str.
           race 4]
 gi|330882166|gb|EGH16315.1| tyrosyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str.
           race 4]
          Length = 403

 Score =  390 bits (1002), Expect = e-106,   Method: Composition-based stats.
 Identities = 103/409 (25%), Positives = 173/409 (42%), Gaps = 24/409 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG    +     ++ L     +    G+D TA  LH GH   +  L   Q  GH+ I
Sbjct: 10  LIKRGADELLVEAELVEKLKRGQPLRIKAGFDPTAPDLHLGHTVLINKLRQFQDLGHQII 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T +IGDPS +  +R  +  +++ +  E  K      +     +    +  N TW
Sbjct: 70  FLIGDFTGMIGDPSGKSATRPPLTREQVLDYAETYKSQVFKILDPAKTE----VAFNSTW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +  +   D +R + S ++V RML  +    R K  QS++  EF Y ++Q YD V L  + 
Sbjct: 126 MDKLSPADFIR-LSSQYTVARMLERDDFDKRYKSNQSIAIHEFLYPLVQGYDSVALKAD- 183

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G +L           LT PLL    G  KM K+L   + + + 
Sbjct: 184 ---VELGGTDQKFNLLMGRELQRAYGQEPQCILTMPLLEGLDGVKKMSKSLGNYVGIQE- 239

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEITT 308
             +P   +    +I D+ +  + + L+   M EI+  +     G    + K  +A E+  
Sbjct: 240 --APGIMYSKLVSIPDSLMWRYFELLSFRSMEEINGLKADCEAGANPRDIKIKLAEELVA 297

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
             HG E A  A  +A            +P IS++  E    M +  ++ KAG   +   A
Sbjct: 298 RFHGEEAAANAHRSAGNRMKEGELPDDLPEISVAAIE---DMPISAVLNKAGLVKNAAVA 354

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           R  L S  ++I+  ++ +     KL             GKK      L 
Sbjct: 355 RDLLASGGVRIDGEVV-DRGFVFKL-----GATHVCQAGKKAFGCVTLV 397


>gi|114564135|ref|YP_751649.1| tyrosyl-tRNA synthetase [Shewanella frigidimarina NCIMB 400]
 gi|114335428|gb|ABI72810.1| tyrosyl-tRNA synthetase [Shewanella frigidimarina NCIMB 400]
          Length = 398

 Score =  390 bits (1002), Expect = e-106,   Method: Composition-based stats.
 Identities = 97/416 (23%), Positives = 181/416 (43%), Gaps = 25/416 (6%)

Query: 6   SDFLSILSE--RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           ++   +L+E  RG    +     L+ L     +   +G D TA  +H GH   L  +   
Sbjct: 2   ANLDQVLAEIKRGTDEILLEADLLEKLKEGRPLRIKLGADPTAPDIHLGHTVILNKMRTF 61

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q+ GH+ I L+G  T ++GDPS ++ +R  +  +++  N E  K      +     +   
Sbjct: 62  QELGHEVIFLIGDFTGMVGDPSGKNSTRPPLTREQVLANAETYKEQVYKILDPAKTR--- 118

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            +  N +WL  +    ++R + S  +V RM+  +  + R    QS++  EF Y +LQ YD
Sbjct: 119 -IEFNSSWLEPLGAAGMIR-LASQQTVARMMERDDFKKRYASGQSIAIHEFMYPLLQGYD 176

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLS 242
            V L  +    +++GG+DQ  N++ G +L +         +  PLL    G  KM K+  
Sbjct: 177 SVALKAD----VELGGTDQKFNLLMGRELQKSEGQKPQTVIMMPLLEGLDGVKKMSKSAH 232

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA--KLQGKEINEAKK 300
             I +++        +    +I D  +  + + L+  P++E+ +       G    + K 
Sbjct: 233 NYIGVSEPAN---EMFGKLMSISDDLMWRYLELLSFRPLTELAQFKLDVENGTNPRDIKI 289

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           ++A EI    H  E+A+ A  A ++ F        +  + +   E   G+ +  L+  AG
Sbjct: 290 LLAKEIIARFHDEEQAQAAHQAFIDRFQKGAIPDDIEEVVL---EAGEGIAIANLLKDAG 346

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
              ST++  R +K  A+K++   I +       Q F++        GK+      L
Sbjct: 347 LVGSTSDGIRMIKQGAVKMDGEKIED-----SRQIFNAGLEAVFQVGKRKFAKVIL 397


>gi|295696870|ref|YP_003590108.1| tyrosyl-tRNA synthetase [Bacillus tusciae DSM 2912]
 gi|295412472|gb|ADG06964.1| tyrosyl-tRNA synthetase [Bacillus tusciae DSM 2912]
          Length = 413

 Score =  390 bits (1002), Expect = e-106,   Method: Composition-based stats.
 Identities = 100/411 (24%), Positives = 179/411 (43%), Gaps = 31/411 (7%)

Query: 15  RGFIHQISNPREL-----DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
           RG   +I    EL       + S   +   +G D TA  +H GH   L  L   Q  GH+
Sbjct: 23  RGA-AEIVPEEELVEKVRRSVSSGKPLRVKLGLDPTAPDIHLGHTVVLQKLRQFQDLGHE 81

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
              ++G  T  IGDP+ + E+RR +  ++++ N +  +      +  G       ++ N 
Sbjct: 82  VYLVIGDFTGRIGDPTDKSETRRQLTEEQVRANAKTYEEQLFKVLDPGRT----HVVFNS 137

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
           TWL  + + +++R + +  +V RML  E    R      +S  EF Y ++Q YD V L  
Sbjct: 138 TWLAPLTFAEVIR-LAASTTVARMLEREDFHKRFYGNLPISLHEFFYPLMQGYDSVALRA 196

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLN 248
           +    +++GG+DQ  N++ G  L +     +  A+  PLL    G  KM K+L   I L+
Sbjct: 197 D----VELGGTDQKFNLLMGRTLQKEFGQSQQAAVMVPLLEGLDGEKKMSKSLGNYIGLD 252

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAKKIIATE 305
                P + +    +I D+  V + +  T L   E+DR+     +      +AK  +A  
Sbjct: 253 ---DPPRDMYGKAMSIPDSLTVKYFELATDLSNDELDRLKGDLTEGRLHPRDAKMRLAKT 309

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           +  M HG   AE A       F        +    I        + ++ L+V+ G A S 
Sbjct: 310 LVRMYHGPNAAEDAEHHFRTIFQERQLPSDIEERQIP----PGPVWIVRLLVENGLAGSN 365

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            EARR ++   +++++  I +   +I+ ++      + +  GK+  +   +
Sbjct: 366 GEARRLIEQGGVRVDDERIDSPDREIEPRE-----GMVVQVGKRRFLRFRI 411


>gi|77164428|ref|YP_342953.1| tyrosyl-tRNA synthetase [Nitrosococcus oceani ATCC 19707]
 gi|254434296|ref|ZP_05047804.1| tyrosyl-tRNA synthetase [Nitrosococcus oceani AFC27]
 gi|115305811|sp|Q3JCM3|SYY_NITOC RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|76882742|gb|ABA57423.1| tyrosyl-tRNA synthetase [Nitrosococcus oceani ATCC 19707]
 gi|207090629|gb|EDZ67900.1| tyrosyl-tRNA synthetase [Nitrosococcus oceani AFC27]
          Length = 407

 Score =  390 bits (1002), Expect = e-106,   Method: Composition-based stats.
 Identities = 108/412 (26%), Positives = 185/412 (44%), Gaps = 23/412 (5%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  +  RG    +        L    ++    G+D TA  LH GH   L  L   Q+ G
Sbjct: 7   ILDEIR-RGTEEVLLEEELKLRLEQGRILRVKAGFDPTAPELHLGHTVLLNKLRQFQEFG 65

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+ + L+G  T +IGDPS ++ +R+ +   +I EN    +      +         L++ 
Sbjct: 66  HEVLFLIGDFTGMIGDPSGKNVTRQPLTRDKILENARTYEEQIFRVLD----PEKTLVVF 121

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N +W+  +   DL+R + S ++V RML  +    R + ++ ++  EF Y +LQ YD V L
Sbjct: 122 NSSWMSGMTAADLVR-LSSHYTVARMLERDDFYKRYQGKRPIAIHEFLYPLLQGYDSVAL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIW 246
             +    +++GG+DQ  N++ G DL +     +   +T P+L    G  KM K+L   I 
Sbjct: 181 KAD----VELGGTDQKFNLLVGRDLQKAYGQEQQIIITMPILEGLDGVQKMSKSLGNYIG 236

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIAT 304
           +++    P   +    +I D  +  + + L++ PMSEI R  K   QG    + K  +A 
Sbjct: 237 ISEP---PREIFGKLMSISDDLMWRYLELLSSRPMSEISRWKKEVEQGANPRDIKVKLAK 293

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           EI    H    AE+   A +  F      + +P I I       G+ +  L+ ++    S
Sbjct: 294 EIVARFHDDSMAEQVHEAFVAQFRRGAMPEDIPEILIVAGR--EGIAIARLLKESALTAS 351

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           T+E+ R +K  A+KI+   + N+ LQI            +  GK+      +
Sbjct: 352 TSESLRLIKQGAVKIDGQRLGNQSLQI-----LPGITHVVQVGKRRFARVSI 398


>gi|290953151|ref|ZP_06557772.1| tyrosyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           URFT1]
 gi|295313679|ref|ZP_06804263.1| tyrosyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           URFT1]
          Length = 396

 Score =  390 bits (1002), Expect = e-106,   Method: Composition-based stats.
 Identities = 97/417 (23%), Positives = 180/417 (43%), Gaps = 27/417 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M + K      + +RG    +     +  L     +    G D TA  +H GH   +  L
Sbjct: 1   MSSIKETL--EIIKRGADEVLIEEELIKKLQKHKPLIIKFGCDPTAPDIHLGHTVVINKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             LQ  GH+   L+G  T+ IGDP+ ++ +R  + ++E+  N E         +     K
Sbjct: 59  KQLQDLGHEIHFLIGDFTAQIGDPTGKNATRPPLTTEEVAANAETYTKQVFKILD----K 114

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
              ++  N  W   +   ++++ + S  +V RML  +    R K  QS+S  EF Y ++Q
Sbjct: 115 DKTVICRNGDWFNKMSASEMIK-LASKSTVARMLERDDFSKRYKGGQSISIHEFLYPLVQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGK 239
            YD V +  +    +++GG+DQ  N++ G +L ++        +T PLL    G  KM K
Sbjct: 174 GYDSVAMNAD----IELGGTDQKFNLLMGRELQKQQGQEPQVIITMPLLEGLDGVKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINE 297
           +    I + +        +    +I D  +  + + L+   +  I ++ +    G    +
Sbjct: 230 SSQNYIGIEEPAN---EIFGKIMSISDELMWRYYELLSFKSLENIAKLKQDVAAGANPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K  +A E+    H +E+AE A    ++ F  +          I+  E+++ + +  L+ 
Sbjct: 287 IKIELAKELIERFHSKEDAESAHQDFIQRFQKNQIPDD-----INVVELNQELPIANLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +AG   ST+EA R ++  A+KI+   +S+ K+      F    N     GK+     
Sbjct: 342 EAGLVASTSEANRMIQQGAVKIDGEKLSDAKII-----FAKGTNNVFQVGKRKFAKI 393


>gi|330861036|emb|CBX71307.1| tyrosyl-tRNA synthetase [Yersinia enterocolitica W22703]
          Length = 347

 Score =  390 bits (1002), Expect = e-106,   Method: Composition-based stats.
 Identities = 130/350 (37%), Positives = 185/350 (52%), Gaps = 21/350 (6%)

Query: 80  IIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYID 139
           +IGDPSF+   R++     + E +EKI+   S F+ +  G+  A+  NN  W   +  + 
Sbjct: 1   MIGDPSFKASERKLNTEDTVNEWVEKIRRQVSPFLDFDCGENSAIAANNYDWFGGMNVLT 60

Query: 140 LLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYDFVELAKNYDCRLQMG 198
            LR+IG  FSVN+M++ E+V+ RL R+   +SF EF+Y +LQAYDF  L K +   LQ+G
Sbjct: 61  FLRDIGKHFSVNQMINKEAVKQRLNRDDSGISFTEFSYNLLQAYDFACLNKAHGVALQIG 120

Query: 199 GSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFW 258
           GSDQWGNI  GIDL  RL   +++ LT PL+T A GTK GKT  GA+WL+ + TSPY F+
Sbjct: 121 GSDQWGNITSGIDLTRRLHQQQVYGLTVPLITKADGTKFGKTEGGAVWLDPKKTSPYKFY 180

Query: 259 QYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKIIATEITTMVHGREE 315
           Q+W N  DADV  F K  T + + EI   +   K  GK    A+ ++A  +T MVHG E 
Sbjct: 181 QFWINTADADVYRFLKFFTFMSLEEINALEEEDKNSGKAPR-AQYVLAENVTGMVHGEEG 239

Query: 316 AEKAATAAMECFDMSIHS-----------QHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
              A       F   ++              MPTI +++D       L   +V A    S
Sbjct: 240 LAAAKRITASLFSGDLNDMTEADFAQLAQDGMPTIELTRD-----ADLQQALVNAELVPS 294

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
             +AR  + SNA+ IN    S+ +      D        L  GKK++ + 
Sbjct: 295 RGQARTMISSNAVAINGEKQSDPEYAFTDADRLFGRYTLLRRGKKHYCLI 344


>gi|53804945|ref|YP_113252.1| tyrosyl-tRNA synthetase [Methylococcus capsulatus str. Bath]
 gi|81682669|sp|Q60AU5|SYY_METCA RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|53758706|gb|AAU92997.1| tyrosyl-tRNA synthetase [Methylococcus capsulatus str. Bath]
          Length = 397

 Score =  389 bits (1001), Expect = e-106,   Method: Composition-based stats.
 Identities = 104/416 (25%), Positives = 175/416 (42%), Gaps = 25/416 (6%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           +D ++ L  RG  H++    EL      G  +    G+D TA  LH GH   L  L   Q
Sbjct: 2   NDVITQLL-RGT-HEVLRLEELQKRIESGKPLRIKAGFDPTAPDLHLGHTVLLNKLKQFQ 59

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GH+ I L+G  T +IGDP+ ++ +RR +   E+ EN +  +      +         L
Sbjct: 60  DLGHETIFLIGDFTGMIGDPTGKNVTRRPLTRDEVIENAKTYEEQIYKVL----CPERTL 115

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           ++ N +W+ ++   DL++      +V RML  +    R    Q +S  EF Y ++Q YD 
Sbjct: 116 VMFNSSWMNAMTSADLIQLAAKH-TVARMLERDDFAKRYAGGQPISIHEFLYPLIQGYDS 174

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSG 243
           V L  +    +++GG+DQ  N++ G  L E         +T P+L    G  KM K+L  
Sbjct: 175 VALKAD----VELGGADQKFNLLVGRHLQEIYGQTPQVVMTMPILEGLDGIQKMSKSLGN 230

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKI 301
            I +      P + +    +I D  +  +   L+  P++E+ R  +   +G    + K  
Sbjct: 231 YIGI---ADPPDDMFGKIMSISDDLMWRYYDLLSFAPLAEVARWRRECSEGANPRDVKVR 287

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGF 361
           +  EI    HG   A KA          +     +    I+  +   G  +  L+     
Sbjct: 288 LGQEIVERFHGASAARKALENFEARHRDNAVPDDLVEQVIAVPD--GGYPIANLVHDLAL 345

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
             ST+EA R +K   IKI+   + + K ++        G   +  GK+      L 
Sbjct: 346 TASTSEALRLIKQGGIKIDGERLEDPKCRMTA-----GGTHIIQVGKRKFAKIRLT 396


>gi|241668381|ref|ZP_04755959.1| tyrosyl-tRNA synthetase [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254876914|ref|ZP_05249624.1| tyrosyl-tRNA synthetase [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254842935|gb|EET21349.1| tyrosyl-tRNA synthetase [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
          Length = 396

 Score =  389 bits (1001), Expect = e-106,   Method: Composition-based stats.
 Identities = 96/407 (23%), Positives = 173/407 (42%), Gaps = 25/407 (6%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            + +RG    +     +  L     +    G D TA  +H GH   +  L  LQ  GH+ 
Sbjct: 9   EIIKRGADEVLIEEELVKKLEKNRPLVIKFGCDPTAPDIHLGHTVVINKLKQLQDLGHEI 68

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
             L+G  T+ IGDP+ ++ +R  + ++E+  N E         +     K   ++  N  
Sbjct: 69  HFLIGDFTAQIGDPTGKNATRPPLTAEEVAANAETYTKQVFKILD----KEKTVIRRNGD 124

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           W   +   D+++ + S  +V RML  +    R K  QS+S  EF Y ++Q YD V +  +
Sbjct: 125 WFDKMSASDMIK-LASKSTVARMLERDDFSKRYKGGQSISIHEFLYPLVQGYDSVAMNAD 183

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNK 249
               +++GG+DQ  N++ G +L ++        +T PLL    G  KM K+    I + +
Sbjct: 184 ----IELGGTDQKFNLLMGRELQKQQGQEPQVIITMPLLEGLDGVKKMSKSSQNYIGIEE 239

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEIT 307
               P + +    +I D  +  + + L+   +  I   +     G    + K  +A E+ 
Sbjct: 240 N---PNDMFGKVMSISDELMWRYYELLSFKSLDTIANLKQDVANGTNPRDIKIELAKELI 296

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
              H +E+AE A    ++ F  +          I+  E+++ + +  L+ +AG   ST+E
Sbjct: 297 ERFHSKEDAESAHQDFIQRFQKNQIPDD-----INVVELNQELPIANLLKEAGLVASTSE 351

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           A R +K  A+KI+     + K       F          GK+     
Sbjct: 352 AIRMIKQGAVKIDGEKAEDNKAI-----FGKGTENVFQVGKRKFAKV 393


>gi|319956609|ref|YP_004167872.1| tyrosyl-tRNA synthetase [Nitratifractor salsuginis DSM 16511]
 gi|319419013|gb|ADV46123.1| tyrosyl-tRNA synthetase [Nitratifractor salsuginis DSM 16511]
          Length = 400

 Score =  389 bits (1001), Expect = e-106,   Method: Composition-based stats.
 Identities = 108/426 (25%), Positives = 197/426 (46%), Gaps = 37/426 (8%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILC-----SQGVVTAYIGYDLTASSLHAGHLT 55
           MP  K+  +  + ERG   +I +   ++ L      +       +G D TA  LH GH  
Sbjct: 1   MPVVKA--MREI-ERGT-AEIIDRERIESLVRNYYENGTPYKVKLGLDPTAPDLHLGHTV 56

Query: 56  QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK 115
            L  L   QK G     L+G  T++IGDP+ + E+R+++  + +++N +  +      + 
Sbjct: 57  ILQKLAAFQKHGAIVQLLIGDFTAMIGDPTGKSETRKVLDRETVKQNAQTYQEQAFKILD 116

Query: 116 YGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFN 175
               +    ++ N TWL ++   D L ++ + ++V RML  +    R K  QS++  EF 
Sbjct: 117 PEKTE----LMFNSTWLDALG-ADGLIQLTTQYNVARMLERDDFEKRFKSGQSIAISEFL 171

Query: 176 YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASG 234
           Y +LQ YD V +  +    +++GG+DQ  N++ G  L        +   L  P+L    G
Sbjct: 172 YPLLQGYDSVAMESD----IELGGTDQKFNLLMGRHLQRAYGVGKEQAVLMMPILEGLDG 227

Query: 235 -TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK 293
             KM K+L   + +++        +    +I D  +  + + L++  + EI+ M K   +
Sbjct: 228 VQKMSKSLGNYVGISEPAK---EIYAKILSISDELMWRYYELLSSRSLEEIEEMKKQVAE 284

Query: 294 ---EINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGM 350
                  AK+++A EIT   H  EEA+KA  A    F      + +P +++       G+
Sbjct: 285 GTLHPKRAKELLALEITARFHNEEEAQKAKEAFDSLFKARQIPEDIPEVTL-----EPGV 339

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            +   +V AG   S ++ARR +K  A++I+   +S+E+L ++       G   L  GK+ 
Sbjct: 340 WICKALVDAGLEPSNSQARRDIKQGAVRIDQEKVSDEQLTLEP------GEYILQVGKRK 393

Query: 411 HIICHL 416
                +
Sbjct: 394 FARAKV 399


>gi|89256317|ref|YP_513679.1| tyrosyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           LVS]
 gi|115314762|ref|YP_763485.1| tyrosyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           OSU18]
 gi|167010168|ref|ZP_02275099.1| tyrosyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FSC200]
 gi|254367649|ref|ZP_04983670.1| tyrosyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           257]
 gi|89144148|emb|CAJ79407.1| Tyrosyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           LVS]
 gi|115129661|gb|ABI82848.1| tyrosine--tRNA ligase [Francisella tularensis subsp. holarctica
           OSU18]
 gi|134253460|gb|EBA52554.1| tyrosyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           257]
          Length = 396

 Score =  389 bits (1001), Expect = e-106,   Method: Composition-based stats.
 Identities = 97/417 (23%), Positives = 180/417 (43%), Gaps = 27/417 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M + K      + +RG    +     +  L     +    G D TA  +H GH   +  L
Sbjct: 1   MSSIKETL--EIIKRGADEVLIEEELIKKLQKHKPLIIKFGCDPTAPDIHLGHTVVINKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             LQ  GH+   L+G  T+ IGDP+ ++ +R  + ++E+  N E         +     K
Sbjct: 59  KQLQDLGHEIHFLIGDFTAQIGDPTGKNATRPPLTTEEVAANAETYTKQVFKILD----K 114

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
              ++  N  W   +   ++++ + S  +V RML  +    R K  QS+S  EF Y ++Q
Sbjct: 115 DKTVIRRNGDWFNKMSASEMIK-LASKSTVARMLERDDFSKRYKGGQSISIHEFLYPLVQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGK 239
            YD V +  +    +++GG+DQ  N++ G +L ++        +T PLL    G  KM K
Sbjct: 174 GYDSVAMNAD----IELGGTDQKFNLLMGRELQKQQGQEPQVIITMPLLEGLDGVKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINE 297
           +    I + +        +    +I D  +  + + L+   +  I ++ +    G    +
Sbjct: 230 SSQNYIGIEEPAN---EIFGKIMSISDELMWRYYELLSFKSLENIAKLKQDVAAGANPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K  +A E+    H +E+AE A    ++ F  +          I+  E+++ + +  L+ 
Sbjct: 287 IKIELAKELIERFHSKEDAESAHQDFIQRFQKNQIPDD-----INVVELNQELPIANLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +AG   ST+EA R ++  A+KI+   +S+ K+      F    N     GK+     
Sbjct: 342 EAGLVASTSEANRMIQQGAVKIDGEKLSDAKII-----FAKGTNNVFQVGKRKFAKI 393


>gi|269103471|ref|ZP_06156168.1| tyrosyl-tRNA synthetase [Photobacterium damselae subsp. damselae
           CIP 102761]
 gi|268163369|gb|EEZ41865.1| tyrosyl-tRNA synthetase [Photobacterium damselae subsp. damselae
           CIP 102761]
          Length = 395

 Score =  389 bits (1001), Expect = e-106,   Method: Composition-based stats.
 Identities = 99/419 (23%), Positives = 175/419 (41%), Gaps = 28/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M   +     I  +RG    I     +  L     +   +G D TA  +H GH   L  L
Sbjct: 1   MATIEQALAEI--KRGVDELIPEEELIAKLKENRPLRIKLGADPTAPDIHLGHTVILNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+   L+G  T ++GDP+ ++ +R  +  +++  N E  K      +     K
Sbjct: 59  RTFQELGHEVTFLIGDFTGMVGDPTGKNVTRPPLTREQVLANAETYKEQVFKILDPAKTK 118

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N +WL  +    ++R + S  +V RML  +  + R    + ++  EF Y +LQ
Sbjct: 119 ----IEFNSSWLSELGAEGMIR-LASNQTVARMLERDDFKKRYGENRPIAIHEFMYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGK 239
            YD V +  +    +++GG+DQ  N++ G ++ +         LT PLL    G  KM K
Sbjct: 174 GYDSVAMKTD----VELGGTDQKFNLLMGREMQKSYGQKPQVILTMPLLVGLDGVKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINE 297
           +    I +     +P   +    +I D  + S+ + L+  P+ E+ +  +    GK   +
Sbjct: 230 SAHNYIGV---ADAPSEMFGKIMSISDDLMWSYFELLSFRPLEELAQFKQDVANGKNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A EI    H   +A+ A    +  F      + M      + E   GM +  L+ 
Sbjct: 287 VKFLLAKEIIARFHSEADADAAEQEFISRFQKGNMPEEM-----PEFEFEAGMPIANLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            A    ST++A R ++  A+KI+   + + KL          G      GK+      L
Sbjct: 342 DAELVNSTSDAMRMIRQGAVKIDGEKVEDTKLTPAA------GTAVYQVGKRKFARVTL 394


>gi|218889391|ref|YP_002438255.1| tyrosyl-tRNA synthetase [Pseudomonas aeruginosa LESB58]
 gi|218769614|emb|CAW25374.1| tyrosyl-tRNA synthetase 2 [Pseudomonas aeruginosa LESB58]
          Length = 399

 Score =  389 bits (1001), Expect = e-106,   Method: Composition-based stats.
 Identities = 104/408 (25%), Positives = 172/408 (42%), Gaps = 24/408 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG    +     +  L     +    G+D TA  LH GH   +  L   Q  GH+ I
Sbjct: 10  LIQRGADEILVEAELVAKLKRGQPLRIKAGFDPTAPDLHLGHTVLINKLRQFQDLGHQVI 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T +IGDPS +  +R  +  +++ EN E  K      +     +    +  N TW
Sbjct: 70  FLIGDFTGMIGDPSGKSVTRPPLTREQVLENAETYKSQVFKILDPAKTE----VAFNSTW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +  +   D +R + S ++V RML  +    R    Q ++  EF Y ++Q YD V L  + 
Sbjct: 126 MDQLTPADFIR-LASQYTVARMLERDDFSKRYASNQPIAIHEFLYPLVQGYDSVALKAD- 183

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G +L           LT PLL    G  KM K+L   I + + 
Sbjct: 184 ---VELGGTDQKFNLLMGRELQRAYGQEAQVILTMPLLEGLDGVKKMSKSLGNYIGIQE- 239

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEITT 308
             +P   +    +I D  +  + + L+   + EID  R     G    + K  +A EI  
Sbjct: 240 --APGVMYSKLVSIPDTLMWRYFELLSFRSLDEIDSFRKDVEAGANPRDIKIKLAEEIVA 297

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
             HG E A  A  +A          + +P I +S  E    M + +++ KAG   +   A
Sbjct: 298 RFHGEEAAASAHKSAGNRLKDGELPEDLPEIELSSPE---DMPVASVLNKAGLVKNAAAA 354

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           R  L + ++K++  ++ +    + L             GKK      L
Sbjct: 355 RDLLGAGSVKVDGQVV-DRTFMLAL-----GETRMFQAGKKAFARITL 396


>gi|323143032|ref|ZP_08077738.1| tyrosine--tRNA ligase [Succinatimonas hippei YIT 12066]
 gi|322417226|gb|EFY07854.1| tyrosine--tRNA ligase [Succinatimonas hippei YIT 12066]
          Length = 395

 Score =  389 bits (1000), Expect = e-106,   Method: Composition-based stats.
 Identities = 102/407 (25%), Positives = 176/407 (43%), Gaps = 30/407 (7%)

Query: 15  RGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG   +I    EL      G  +   +G D TA  +H GH   L  L   Q+ GH+ + +
Sbjct: 13  RGA-EEIIPIEELKKKLESGRKLIVKLGMDPTAPDIHLGHTVILNKLRTFQELGHQVVLI 71

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
           +G  T+ +GDPS ++ +R  +  ++I EN +         +     K   ++  N  WL 
Sbjct: 72  IGDFTASVGDPSGKNTTRPQLSREKILENAKTYAEQAFKILD----KDKTIIRYNSEWLG 127

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDC 193
            +     +R + S  +V RML  +    R +  Q ++  EF Y + Q YD V L  +   
Sbjct: 128 KLGAEGTIR-LASKLTVARMLERDDFTKRYQSGQPIAIHEFLYPLFQGYDSVCLKAD--- 183

Query: 194 RLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMT 252
            +++GG+DQ  N++ G +L +         L  PLL    G  KM K+    I ++    
Sbjct: 184 -IELGGTDQKFNLLMGRELQKDAGQEPQCVLMMPLLVGLDGVKKMSKSAGNYIGVH---D 239

Query: 253 SPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAKKIIATEITTM 309
           +P + +    ++ D  + ++   L+  P+ EI  +            +AK  +  EI   
Sbjct: 240 APNDMFGKIMSLSDDLMWTYFDLLSFRPLKEIAELKANCASGQMNPRDAKMELGREIVAR 299

Query: 310 VHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEAR 369
            HG+EE +KA  + +  F        MP +++          L TL+  +    ST+EA 
Sbjct: 300 YHGKEEGDKAVESFINQFAKGAVPDEMPELTL------DNAPLPTLLKNSQLCASTSEAM 353

Query: 370 RHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           R +K NA+KI+  +I+++   I      + G      GK+      L
Sbjct: 354 RMIKQNAVKIDGKVIADKDEAI------ANGTYVFQVGKRRFARITL 394


>gi|313672274|ref|YP_004050385.1| tyrosyl-tRNA synthetase [Calditerrivibrio nitroreducens DSM 19672]
 gi|312939030|gb|ADR18222.1| tyrosyl-tRNA synthetase [Calditerrivibrio nitroreducens DSM 19672]
          Length = 400

 Score =  389 bits (1000), Expect = e-106,   Method: Composition-based stats.
 Identities = 109/407 (26%), Positives = 178/407 (43%), Gaps = 32/407 (7%)

Query: 19  HQISNPRELDILC-----SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
            +I +  EL         +   +    G+D TA  LH GH   +  +   Q  GH  I L
Sbjct: 16  EEIISEEELKQKLEYSIRNNIPLRVKAGFDPTAPDLHLGHTVLIQKMKHFQDLGHHVIFL 75

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
           +G  T +IGDP+ + E+R+ +  +E+ +N E  K      +     +    +  N  W+ 
Sbjct: 76  IGDFTGLIGDPTGKSETRKALTIEEVLKNAETYKEQVFKILDPAKTE----IAFNSHWMG 131

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDC 193
            +   D+++ + S ++V RML  +    R    + +S  EF Y ++Q YD V L  +   
Sbjct: 132 KMTSYDMIK-LASSYTVARMLERDDFAKRYSSGKPISIHEFLYPLVQGYDSVALKSD--- 187

Query: 194 RLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMT 252
            +++GG+DQ  N++ G DL          ALT P+L    G  KM K+L   + + ++  
Sbjct: 188 -VELGGTDQKFNLLVGRDLQRMNGQNPQIALTVPILEGLDGVQKMSKSLGNYVGITEK-- 244

Query: 253 SPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGK-EINEAKKIIATEITTM 309
            P + +    +I D  +  +   L+   + E++R+      GK    +AKK +A EI   
Sbjct: 245 -PTDMFGKIMSISDQLMFRYYLLLSDKSLEEVERIKNGVESGKIHPMDAKKDLAEEIVKR 303

Query: 310 VHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEAR 369
            HG  EA++A     + F        +       DE      L+ +I K GFA S +E R
Sbjct: 304 FHGYVEAKRAREWFEQVFTKKEIPDDIKLFEGKSDE-----KLIDIIKKLGFAPSNSEVR 358

Query: 370 RHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           R   + AI IN   I N  L +   +F       L  GK+N     L
Sbjct: 359 RLATAGAITINGEKIENVDLSLGAGEF------ILKVGKRNFAKLKL 399


>gi|187931843|ref|YP_001891828.1| tyrosyl-tRNA synthetase [Francisella tularensis subsp. mediasiatica
           FSC147]
 gi|187712752|gb|ACD31049.1| tyrosyl-tRNA synthetase [Francisella tularensis subsp. mediasiatica
           FSC147]
          Length = 396

 Score =  389 bits (1000), Expect = e-106,   Method: Composition-based stats.
 Identities = 97/417 (23%), Positives = 180/417 (43%), Gaps = 27/417 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M + K      + +RG    +     +  L     +    G D TA  +H GH   +  L
Sbjct: 1   MSSIKETL--EIIKRGADEVLIEEELIKKLQKHKPLIIKFGCDPTAPDIHLGHTVVINKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             LQ  GH+   L+G  T+ IGDP+ ++ +R  + ++E+  N E         +     K
Sbjct: 59  KQLQDLGHEIHFLIGDFTAQIGDPTGKNATRPPLTAEEVAANAETYTKQVFKILD----K 114

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
              ++  N  W   +   ++++ + S  +V RML  +    R K  QS+S  EF Y ++Q
Sbjct: 115 DKTVIRRNGDWFNKMSASEMIK-LASKSTVARMLERDDFSKRYKGGQSISIHEFLYPLVQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGK 239
            YD V +  +    +++GG+DQ  N++ G +L ++        +T PLL    G  KM K
Sbjct: 174 GYDSVAMNAD----IELGGTDQKFNLLMGRELQKQQGQEPQVIITMPLLEGLDGVKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINE 297
           +    I + +        +    +I D  +  + + L+   +  I ++ +    G    +
Sbjct: 230 SSQNYIGIEEPAN---EIFGKIMSISDELMWRYYELLSFKSLENIAKLKQDVAAGANPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K  +A E+    H +E+AE A    ++ F  +          I+  E+++ + +  L+ 
Sbjct: 287 IKIELAKELIERFHSKEDAESAHQDFIQRFQKNQIPDD-----INVVELNQELPIANLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +AG   ST+EA R ++  A+KI+   +S+ K+      F    N     GK+     
Sbjct: 342 EAGLVASTSEANRMIQQGAVKIDGEKLSDAKII-----FAKGTNNVFQVGKRKFAKI 393


>gi|330938384|gb|EGH42010.1| tyrosyl-tRNA synthetase [Pseudomonas syringae pv. pisi str. 1704B]
          Length = 399

 Score =  389 bits (1000), Expect = e-106,   Method: Composition-based stats.
 Identities = 103/409 (25%), Positives = 173/409 (42%), Gaps = 24/409 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG    +     ++ L     +    G+D TA  LH GH   +  L   Q  GH+ I
Sbjct: 10  LIKRGADELLVEAELVEKLKRGQPLRIKAGFDPTAPDLHLGHTVLINKLRQFQDLGHQII 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T +IGDPS +  +R  +  +++ +  E  K      +     +    +  N TW
Sbjct: 70  FLIGDFTGMIGDPSGKSATRPPLTREQVLDYAETYKSQVFKILDPAKTE----VAFNSTW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +  +   D +R + S ++V RML  +    R K  QS++  EF Y ++Q YD V L  + 
Sbjct: 126 MDQLSPADFIR-LSSQYTVARMLERDDFDKRYKSNQSIAIHEFLYPLVQGYDSVALKAD- 183

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G +L           LT PLL    G  KM K+L   + + + 
Sbjct: 184 ---VELGGTDQKFNLLMGRELQRAYGQEPQCILTMPLLEGLDGVKKMSKSLGNYVGIQE- 239

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEITT 308
             +P   +    +I D+ +  + + L+   M EI   +     G    + K  +A E+  
Sbjct: 240 --APGIMYSKLVSIPDSLMWRYFELLSFRSMEEIKGLKADCEAGANPRDIKIKLAEELVA 297

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
             HG E A  A  +A            +P IS++  E    M +  ++ KAG   +   A
Sbjct: 298 RFHGEEAAANAHRSAGNRMKEGELPDDLPEISVAAAE---DMPISAVLNKAGLVKNAAVA 354

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           R  L S +++I+  ++ +     KL             GKK      L 
Sbjct: 355 RDLLASGSVRIDGEVV-DRSFVFKL-----GATHVCQAGKKAFGRVTLV 397


>gi|134302006|ref|YP_001121975.1| tyrosyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           WY96-3418]
 gi|134049783|gb|ABO46854.1| tyrosyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           WY96-3418]
          Length = 406

 Score =  389 bits (1000), Expect = e-106,   Method: Composition-based stats.
 Identities = 97/417 (23%), Positives = 180/417 (43%), Gaps = 27/417 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M + K      + +RG    +     +  L     +    G D TA  +H GH   +  L
Sbjct: 11  MSSIKETL--EIIKRGADEVLIEEELIKKLQKHKPLIIKFGCDPTAPDIHLGHTVVINKL 68

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             LQ  GH+   L+G  T+ IGDP+ ++ +R  + ++E+  N E         +     K
Sbjct: 69  KQLQDLGHEIHFLIGDFTAQIGDPTGKNATRPPLTAEEVAANAETYTKQVFKILD----K 124

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
              ++  N  W   +   ++++ + S  +V RML  +    R K  QS+S  EF Y ++Q
Sbjct: 125 DKTVIRRNGDWFNKMSASEMIK-LASKSTVARMLERDDFSKRYKGGQSISIHEFLYPLVQ 183

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGK 239
            YD V +  +    +++GG+DQ  N++ G +L ++        +T PLL    G  KM K
Sbjct: 184 GYDSVAMNAD----IELGGTDQKFNLLMGRELQKQQGQEPQVIITMPLLEGLDGVKKMSK 239

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINE 297
           +    I + +        +    +I D  +  + + L+   +  I ++ +    G    +
Sbjct: 240 SSQNYIGIEEPAN---EIFGKIMSISDELMWRYYELLSFKSLENIAKLKQDVAAGANPRD 296

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K  +A E+    H +E+AE A    ++ F  +          I+  E+++ + +  L+ 
Sbjct: 297 IKIELAKELIERFHSKEDAESAHQDFIQRFQKNQIPDD-----INVVELNQELPIANLLK 351

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +AG   ST+EA R ++  A+KI+   +S+ K+      F    N     GK+     
Sbjct: 352 EAGLVASTSEANRMIQQGAVKIDGEKLSDAKII-----FAKGTNNVFQVGKRKFAKI 403


>gi|91774420|ref|YP_544176.1| tyrosyl-tRNA synthetase [Methylobacillus flagellatus KT]
 gi|91708407|gb|ABE48335.1| tyrosyl-tRNA synthetase [Methylobacillus flagellatus KT]
          Length = 399

 Score =  389 bits (1000), Expect = e-106,   Method: Composition-based stats.
 Identities = 100/410 (24%), Positives = 179/410 (43%), Gaps = 25/410 (6%)

Query: 12  LSERGFIHQISNPREL-DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           L +RG I  +   +EL D L +   +    G+D TA  LH GH   L  L   Q  GHK 
Sbjct: 10  LIKRG-IDDLIGEQELIDKLNTGQPLKVKAGFDPTAPDLHLGHAVLLNKLRQFQDLGHKV 68

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           + L+G  T +IGDP+ +  +R  + ++++Q N    +      +K         ++ N +
Sbjct: 69  LFLIGDFTGMIGDPTGKSATRPPLSAEQVQVNARTYQEQVFKILK----PEQTEVVFNSS 124

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           W+  +    +L+   +  +V RML  +    R K  Q ++  EF Y +LQ YD V L  +
Sbjct: 125 WINELGAAGMLKLAATH-TVARMLERDDFEKRYKNNQPIAIHEFLYPLLQGYDSVALKAD 183

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNK 249
               +++GG+DQ  N++ G +L +         LT PLL    G  KM K+L   I + +
Sbjct: 184 ----IELGGTDQRFNLLMGRELQKHFGQLPQSVLTVPLLEGLDGVNKMSKSLGNYIGIAE 239

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATEIT 307
              +    +    ++ D  +  +   L+   M  I+R       G+     K   A EI 
Sbjct: 240 PANT---IFSKLMSVSDELMWRYITLLSFESMETIERWRASVQAGENPRNIKVRFAQEIV 296

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
           T  HG++ A  A     E        +++P +++   E +  + +  L+ +AG   ST+E
Sbjct: 297 TRFHGKQAAVDALADF-ELRSKGGIPENVPEVNVVIKEAA--VAIGPLLKQAGLVASTSE 353

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           A R ++   ++++   + +  LQ+          +    GK+      + 
Sbjct: 354 AFRMIEQGGVRLDGEKVMDRGLQVA-----QGAVVVAQVGKRKFARITIS 398


>gi|261212258|ref|ZP_05926544.1| tyrosyl-tRNA synthetase [Vibrio sp. RC341]
 gi|260838866|gb|EEX65517.1| tyrosyl-tRNA synthetase [Vibrio sp. RC341]
          Length = 395

 Score =  389 bits (1000), Expect = e-106,   Method: Composition-based stats.
 Identities = 101/419 (24%), Positives = 175/419 (41%), Gaps = 28/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M + ++    I  +RG    I     +  L     +   +G D TA  +H GH   L  L
Sbjct: 1   MASIEAALAEI--KRGVEELIPEEELIAKLKENRPLRIKLGADPTAPDIHLGHTVILNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GH    L+G  T ++GDP+ ++ +R  +  +++  N E  K      +     K
Sbjct: 59  RTFQDLGHDVTFLIGDFTGMVGDPTGKNTTRPPLTREDVLRNAETYKQQVFKILDPSKTK 118

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N  WL  +    ++R + S  +V RML  +  + R    Q ++  EF Y +LQ
Sbjct: 119 ----IQFNSEWLSQLGAEGMIR-LASNQTVARMLERDDFKKRYNNGQPIAIHEFMYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGK 239
            YD V +    +  +++GG+DQ  N++ G +L +         L  PLL    G  KM K
Sbjct: 174 GYDSVAM----ETDVELGGTDQKFNLLMGRELQKSNGQKPQVVLMMPLLVGLDGEKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINE 297
           +    I +++   +P   +    +I D  + S+ + L+  P+ EI +       G    +
Sbjct: 230 SAHNYIGVSE---APSEMFGKIMSISDDLMWSYYELLSFRPLEEIAQFKADVQNGTNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A EI T  H   +A+ A    +  F      + MP       E   G+ +  L+ 
Sbjct: 287 IKILLAKEIITRFHTAADADAAEQEFINRFQKGAMPEEMPEF-----EFDAGIAISNLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            AG   ST++A R +K  A+K++   + + KL          G      GK+      +
Sbjct: 342 DAGLVGSTSDALRMIKQGAVKLDGEKLEDAKLVPAC------GTSVYQVGKRKFARVTI 394


>gi|152979484|ref|YP_001345113.1| tyrosyl-tRNA synthetase [Actinobacillus succinogenes 130Z]
 gi|150841207|gb|ABR75178.1| tyrosyl-tRNA synthetase [Actinobacillus succinogenes 130Z]
          Length = 395

 Score =  389 bits (999), Expect = e-106,   Method: Composition-based stats.
 Identities = 106/419 (25%), Positives = 182/419 (43%), Gaps = 28/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M    +  L+ L  RG    +S    ++ L     +   +G D TA  +H GH   L  L
Sbjct: 1   MTDLNT-VLAELK-RGVDEILSEADLIEKLKENRPLKVKLGADPTAPDIHLGHTVVLNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GH+ I L+G  T ++GDPS ++ +R  +  +++  N E  K      +     +
Sbjct: 59  RQFQNFGHEVIFLIGDFTGMVGDPSGKNTTRPPLSREDVLRNAETYKQQIFKILDPQKTR 118

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               ++ N  WL  +    ++R + S ++V RML  +  + R   +Q ++  EF Y +LQ
Sbjct: 119 ----IVFNSEWLGQLGTEGMIR-LTSNYTVARMLERDDFKKRFTNQQPIAIHEFIYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGK 239
            YD V L    +  +++GG+DQ  N++ G +L +        A+T PLL    G  KM K
Sbjct: 174 GYDSVAL----EADVELGGTDQKFNLLVGRELQKSAGKKPQVAITLPLLVGLDGEKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINE 297
           +L   I +     +P   +    +I D  +  +   L+  P+SEI+++      GK   +
Sbjct: 230 SLGNYIGVT---DAPNEMFGKVMSISDDLMWDWYNLLSFRPLSEINQLKADVQAGKNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A E+    H +  AE A    +  F        MP  +         +GL TL+ 
Sbjct: 287 VKILLAKELIARFHDQAAAEAAEQEFINRFQKGAMPDEMPEFT-----FEGEIGLATLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +AG  TST+EA R  +   +KI+   + + +           G      GK+      +
Sbjct: 342 EAGLVTSTSEAIRSAQQGGVKIDGEKVEDVRQN------AQQGTFVYQVGKRKFARITV 394


>gi|325288452|ref|YP_004264633.1| tyrosyl-tRNA synthetase [Syntrophobotulus glycolicus DSM 8271]
 gi|324963853|gb|ADY54632.1| tyrosyl-tRNA synthetase [Syntrophobotulus glycolicus DSM 8271]
          Length = 413

 Score =  389 bits (999), Expect = e-106,   Method: Composition-based stats.
 Identities = 103/406 (25%), Positives = 194/406 (47%), Gaps = 31/406 (7%)

Query: 19  HQISNPRELDI-----LCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
            +I    EL       L     +   +G D TA  +H GH   L  +   Q  GH+ + +
Sbjct: 23  AEIVPVEELRNKIKNSLQKNKPLRIKLGLDPTAPDIHLGHTVPLYKMKQFQDLGHQAVII 82

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
           +G  T+ IGDPS + E+R+ M  +++Q N +  K      +     +    +  N +WL 
Sbjct: 83  IGDFTAKIGDPSGKSETRKPMTEEQVQHNAQTYKEQIFKILDPDKTR----VEFNSSWLS 138

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDC 193
           ++ + D+++ + S  +V RML  +    R   E+ +S  EF Y ++Q YD V L  +   
Sbjct: 139 NMTFSDVIK-LASCTTVARMLERDDFAKRYAEERPISIHEFFYPLMQGYDSVALQAD--- 194

Query: 194 RLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMT 252
            +++GG+DQ  N++ G  L +        ALT+P+L    G  KM K+L   I + +   
Sbjct: 195 -VELGGTDQKFNLLMGRTLQKEFGQEPQVALTTPILEGLDGVHKMSKSLGNYIGVYE--- 250

Query: 253 SPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK-LQGK--EINEAKKIIATEITTM 309
           +P   +    ++ D  ++ + + +T +P+ +I R+ + LQ       + K  +  EI  +
Sbjct: 251 APREMFGKTMSMPDEIMIRYFELITAVPVLDIRRLEQGLQDGSVHPRDLKMRLGWEIVHI 310

Query: 310 VHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGM-GLLTLIVKAGFATSTNEA 368
            HG+++A++A    ++ F        MP ISI++  +  G+  +++++V AG   S  EA
Sbjct: 311 YHGKKQADEAKEEFIKMFQRKEAPDEMPEISIAQIGLESGVTDMVSILVSAGLVPSRGEA 370

Query: 369 RRHLKSNAIKINNSIISNEKL--QIKLQDFDSTGNIKLSFGKKNHI 412
           RR ++   ++IN+  +S  +   +I   D        +  GK+  +
Sbjct: 371 RRLIEQGGVRINDEKVSQAQSSPRINPGD-------VIKVGKRKFV 409


>gi|115717870|ref|XP_781450.2| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
 gi|115956114|ref|XP_001186796.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
          Length = 697

 Score =  389 bits (999), Expect = e-106,   Method: Composition-based stats.
 Identities = 127/423 (30%), Positives = 206/423 (48%), Gaps = 28/423 (6%)

Query: 18  IHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGG 77
           I Q S+   L  L +    + Y G D TA SLH G+L  L+ L   Q+ GH+ I+L+GG 
Sbjct: 280 IVQSSDE--LPKLLTSSPQSIYCGVDPTAESLHIGNLLALIALIHCQRAGHQCIALIGGA 337

Query: 78  TSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSS--------FIKYGTGKTDALMLNNE 129
           T++IGDPS +   R  +    ++ N   I              F K      D  ++NN+
Sbjct: 338 TALIGDPSGKSTERESLHPDLVERNAASIHQSLQRIFTNHERLFWKRDKTLPDIRIMNNQ 397

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
            W  S   +  L   G FF +  MLS +SV++RL   + +SF EF Y I QAYDF+ L +
Sbjct: 398 DWYKSENLVQFLGTYGRFFRMGSMLSRQSVQTRLNSPEGMSFSEFTYQIFQAYDFLHLHE 457

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
            Y C +Q+GG+DQ GNI+ G DL  R    +++ LT PL+T+A+G K+GKT   A+W+N+
Sbjct: 458 QYGCNIQIGGTDQLGNIMSGHDLIRRTAGNEVYGLTIPLVTSATGDKLGKTAGNAVWINR 517

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKKIIATEIT 307
           + TS ++ +QY+  + D DV    K  T LP+ +ID + +      E  +A++++A ++ 
Sbjct: 518 DKTSEFDLYQYFIRMHDNDVEKSLKLFTFLPLQDIDAVVRKHKAKPEKRKAQRLLAEQVL 577

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDE------------VSRGMGLLTL 355
            +VHG E  EKA       +        +  +S+ +              +  G+ +  +
Sbjct: 578 LLVHGEEGLEKARRLTEALYSS--DPGALERLSVEEVSQLFGGGSFVEIMLEPGLTVYQV 635

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ-DFDSTGNIKLSFGKKNHIIC 414
            V AG     +     ++   + +N   ++N    ++      S     L  GKKN+ + 
Sbjct: 636 AVAAGALP-KDRGVGIIEDGGVYVNKQRVTNPHEVLQKGLHILSNNVTLLRIGKKNYTLI 694

Query: 415 HLC 417
              
Sbjct: 695 KWV 697


>gi|327399025|ref|YP_004339894.1| Tyrosyl-tRNA synthetase [Hippea maritima DSM 10411]
 gi|327181654|gb|AEA33835.1| Tyrosyl-tRNA synthetase [Hippea maritima DSM 10411]
          Length = 406

 Score =  389 bits (999), Expect = e-106,   Method: Composition-based stats.
 Identities = 104/407 (25%), Positives = 191/407 (46%), Gaps = 29/407 (7%)

Query: 19  HQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
            +I +  EL             +    G+D TA  LH GH   +  L   Q  GH+   L
Sbjct: 19  AEIIDKEELKDKLRDSIKMGKPLKIKAGFDPTAPDLHLGHTVLIQKLKQFQDLGHEVYFL 78

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
           +G  T +IGDP+ + E+R+ +  +E+++N +  K      +     K    ++ N  W  
Sbjct: 79  IGDFTGMIGDPTGKSETRKALSKEEVEKNAQTYKDQIFKILDKDKTK----VVYNSQWCS 134

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDC 193
            +  +D+++ + S  +V RML  +    R    + +S  EF Y +LQ YD V L    + 
Sbjct: 135 KLNAVDMIK-LASTMTVARMLERDDFSKRFSSNKPISIHEFLYPLLQGYDSVAL----EA 189

Query: 194 RLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMT 252
            +++GG+DQ  N++ G  L +         +  P+L    G  KM K+L   + +  E  
Sbjct: 190 DVELGGTDQKFNLLVGRHLQKLQGQRPQTVIMMPILEGLDGVQKMSKSLGNYVGITDE-- 247

Query: 253 SPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAKKIIATEITTM 309
            P + +    +I D  +  + + L+   +SEI++M +          +AK+++A EIT  
Sbjct: 248 -PNDMYGKIMSISDELMWRYYELLSDRDLSEINQMKENVETGKLHPKKAKEMLAFEITKR 306

Query: 310 VHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEAR 369
            HG E+A++AA    E F        +  I++  ++    + +  L+   GF  S++EAR
Sbjct: 307 FHGEEKAKEAAKFFEEMFKKKEIPDEIEEIALQLED--DEVWICHLLKNIGFVKSSSEAR 364

Query: 370 RHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           R +KSNA+ I+++ ++++ L++K       G+  +  GK+      L
Sbjct: 365 RMIKSNAVSIDSNKVTDDSLKLKK------GSYIVKVGKRKIAKVSL 405


>gi|89072503|ref|ZP_01159075.1| tyrosyl-tRNA synthetase [Photobacterium sp. SKA34]
 gi|89051607|gb|EAR57060.1| tyrosyl-tRNA synthetase [Photobacterium sp. SKA34]
          Length = 395

 Score =  389 bits (999), Expect = e-106,   Method: Composition-based stats.
 Identities = 102/417 (24%), Positives = 174/417 (41%), Gaps = 28/417 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M + +   + I  +RG    I     +  L     +   +G D TA  +H GH   L  L
Sbjct: 1   MASIEQALVEI--KRGVEELIPEAELIAKLKENRPLRIKLGADPTAPDIHLGHTVILNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+   L+G  T ++GDP+ ++ +R  +  +++  N E  K      +      
Sbjct: 59  RTFQELGHEVTFLIGDFTGMVGDPTGKNTTRPPLTREDVLRNAETYKEQVFKILDPAKT- 117

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N TWL  +    ++R + S  +V RML  +  + R    + ++  EF Y +LQ
Sbjct: 118 ---TIAFNSTWLSELGAEGMIR-LASNQTVARMLERDDFKKRYGENRPIAIHEFMYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGK 239
            YD V +    +  +++GG+DQ  N++ G +L +         LT PLL    G  KM K
Sbjct: 174 GYDSVAM----ETDVELGGTDQKFNLLMGRELQKSHGQKPQVVLTMPLLVGLDGVKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINE 297
           +    I +     +P + +    +I D  + S+ + L+  PM EI +       GK   +
Sbjct: 230 SAHNYIGI---ADAPSDMFGKIMSISDDLMWSYFELLSFRPMDEIAQFKADVDAGKNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A EI    H  E AE A    +  F        MP       E   G+ +  L+ 
Sbjct: 287 VKFLLAREIIARFHSEEAAEAALQEFISRFQKGNLPDEMPEF-----EFEAGLPIANLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +     ST++A R ++  A+K +   + + KL          GN     GK+     
Sbjct: 342 EVALVNSTSDAMRMIRQGAVKQDGEKVEDTKLVPTA------GNYVFQVGKRKFARV 392


>gi|332535490|ref|ZP_08411271.1| tyrosyl-tRNA synthetase [Pseudoalteromonas haloplanktis ANT/505]
 gi|332035100|gb|EGI71615.1| tyrosyl-tRNA synthetase [Pseudoalteromonas haloplanktis ANT/505]
          Length = 399

 Score =  389 bits (999), Expect = e-106,   Method: Composition-based stats.
 Identities = 95/407 (23%), Positives = 176/407 (43%), Gaps = 23/407 (5%)

Query: 15  RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLM 74
           RG    +     ++ L S   +    G+D TA  LH GH   +  +   Q  GH+ I L+
Sbjct: 12  RGAEEILIEDELVEKLKSGKKLKIKAGFDPTAPDLHLGHTVLINKMKTFQDLGHEVIFLI 71

Query: 75  GGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCS 134
           G  T +IGDP+ ++ +R+ +  +++  N E  K      +          +  N TW+  
Sbjct: 72  GDFTGMIGDPTGKNVTRKPLTREDVLANAETYKEQVFKILDPAKT----TVAFNSTWMEK 127

Query: 135 IKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCR 194
           +    +++ + +  +V RML  +  + R    Q ++  EF Y ++Q +D V L  +    
Sbjct: 128 LGAAGMIK-LAANQTVARMLERDDFKKRYGSGQPIAIHEFLYPLVQGWDSVALESD---- 182

Query: 195 LQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTS 253
           +++GG+DQ  N++ G +L +         L  PLL    G  KM K+L   I +     +
Sbjct: 183 VELGGTDQRFNLLMGRELQKVEGQKPQTVLMMPLLEGTDGVQKMSKSLGNYIGIT---DA 239

Query: 254 PYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATEITTMVH 311
           P + +    +I D  +  +   L+ L + EI    +   QG    + K  +A E+    H
Sbjct: 240 PNDMFGKIMSISDVLMWRYYDLLSALSIEEIAAQKERVEQGTNPRDIKIELAKELIARFH 299

Query: 312 GREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRH 371
              +A+ A    ++ F        +P ++I+  E    + +  L+ +A    ST+EA R 
Sbjct: 300 SEADAQGAHDDFIQRFQKKALPDEIPELTITIAE--DTILIANLLKEANLVVSTSEAMRM 357

Query: 372 LKSNAIKINNS-IISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           +K  A+K+N    I++ KL++               GK+      + 
Sbjct: 358 IKQGAVKLNGEDKITDTKLEVA-----KGTTAIYQVGKRKFANITVA 399


>gi|254369294|ref|ZP_04985306.1| tyrosyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FSC022]
 gi|157122244|gb|EDO66384.1| tyrosyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FSC022]
          Length = 396

 Score =  389 bits (999), Expect = e-106,   Method: Composition-based stats.
 Identities = 97/417 (23%), Positives = 180/417 (43%), Gaps = 27/417 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M + K      + +RG    +     +  L     +    G D TA  +H GH   +  L
Sbjct: 1   MSSIKETL--EIIKRGADEVLIEEELIKKLQKHKPLIIKFGCDPTAPDIHLGHTVVINKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             LQ  GH+   L+G  T+ IGDP+ ++ +R  + ++E+  N E         +     K
Sbjct: 59  KQLQDLGHEIHFLIGDFTAQIGDPTGKNATRPPLTTEEVAANAETYTKQVFKILD----K 114

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
              ++  N  W   +   ++++ + S  +V RML  +    R K  QS+S  EF Y ++Q
Sbjct: 115 DKTVIRRNGDWFNKMSASEMIK-LASKSTVARMLERDDFSKRYKGGQSISIHEFLYPLVQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGK 239
            YD V +  +    +++GG+DQ  N++ G +L ++        +T PLL    G  KM K
Sbjct: 174 GYDSVAMNAD----IELGGTDQKFNLLMGRELQKQQGQEPQVIITMPLLEGLDGVKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINE 297
           +    I + +        +    +I D  +  + + L+   +  I ++ +    G    +
Sbjct: 230 SSQNYIGIEEPAN---EIFGKIMSISDELMWRYYELLSFKSLENIAKLKQDVAAGANPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K  +A E+    H +E+AE A    ++ F  +          I+  E+++ + +  L+ 
Sbjct: 287 IKIELAKELIERFHSKEDAESAHQDFIQRFQKNQIPND-----INVVELNQELPIANLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +AG   ST+EA R ++  A+KI+   +S+ K+      F    N     GK+     
Sbjct: 342 EAGLVASTSEANRMIQQGAVKIDGEKLSDAKII-----FAKGTNNVFQVGKRKFAKI 393


>gi|152980601|ref|YP_001351992.1| tyrosyl-tRNA synthetase [Janthinobacterium sp. Marseille]
 gi|151280678|gb|ABR89088.1| tyrosyl-tRNA synthetase [Janthinobacterium sp. Marseille]
          Length = 413

 Score =  388 bits (998), Expect = e-106,   Method: Composition-based stats.
 Identities = 103/420 (24%), Positives = 188/420 (44%), Gaps = 31/420 (7%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           +   K     +L E  F  +++   +     +   +   +G D TA  LH GH   L  +
Sbjct: 22  LTVAKRGVEELLIESEFAQKLARSEQ-----TGKPLRIKLGLDPTAPDLHLGHTVVLNKM 76

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             LQ  GH+ I L+G  TS+IGDPS R+ +R  +  ++I+EN +      S  +     +
Sbjct: 77  RQLQDLGHQVIFLIGDFTSMIGDPSGRNITRPPLTKEQIEENAKTYFSQASLVLDPERTE 136

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N  W   +    ++ E+ + ++V R+L  E    R K    +S  EF Y ++Q
Sbjct: 137 ----IRYNSEWCDPLGARGMI-ELSAKYTVARILEREDFTKRFKANTPISLHEFLYPLMQ 191

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGK 239
            YD V L  +    L++GG+DQ  N++ G +L +     +   LT PLL    G  KM K
Sbjct: 192 GYDSVALQSD----LELGGTDQKFNLLVGRELQKSYGQEQQCILTMPLLEGLDGVEKMSK 247

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINE 297
           +    I + +   +    +    +I D  +  + + L+   +SEI +  K    G+   +
Sbjct: 248 SKGNYIGITEPGNT---MFAKLMSISDVMMWRYYELLSFRSLSEIAQFKKEVEGGRNPRD 304

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A EI    H  +  E A T  +           +P +++S       +G+  L+ 
Sbjct: 305 IKVLLAQEIVARFHSVQAGEDALTDFVNR-SKGGIPHDIPEVALS----GAPLGIGQLLK 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           +A    ST+EA R ++   ++I+ ++IS++ L+++       G + +  GK+      L 
Sbjct: 360 QANLCASTSEALRMVEQGGVRIDGAVISDKGLKVEA------GTLVVQVGKRKFARVTLA 413


>gi|24372893|ref|NP_716935.1| tyrosyl-tRNA synthetase [Shewanella oneidensis MR-1]
 gi|81462720|sp|Q8EHB3|SYY_SHEON RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|24347014|gb|AAN54380.1|AE015575_6 tyrosyl-tRNA synthetase [Shewanella oneidensis MR-1]
          Length = 398

 Score =  388 bits (998), Expect = e-106,   Method: Composition-based stats.
 Identities = 99/417 (23%), Positives = 181/417 (43%), Gaps = 25/417 (5%)

Query: 6   SDFLSILSE--RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           +D   +L+E  RG    +     L+ L     +   +G D TA  +H GH   L  L   
Sbjct: 2   ADLDQVLAEIRRGTDEILLESDLLEKLKKGRPLRIKLGADPTAPDIHLGHTVILNKLRLF 61

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q+ GH+ I L+G  T ++GDPS ++ +R  +  +++  N E  K      +     +   
Sbjct: 62  QELGHEVIFLIGDFTGMVGDPSGKNSTRPPLTREQVLANAETYKEQVYKILDPAKTR--- 118

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            +  N +WL  +    ++R + S  +V RM+  +  + R    QS++  EF Y +LQ YD
Sbjct: 119 -IEFNSSWLEPLGAAGMIR-LASQQTVARMMERDDFKKRYASGQSIAIHEFMYPLLQGYD 176

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLS 242
            V L  +    +++GG+DQ  N++ G +L +         +  PLL    G  KM K+  
Sbjct: 177 SVALKAD----VELGGTDQKFNLLMGRELQKAEGQKPQAVIMMPLLEGLDGVKKMSKSAH 232

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKK 300
             I +++        +    +I D  +  + + L+  P++EI++  +    G    + K 
Sbjct: 233 NYIGVSEPAN---EMFGKIMSISDELMWRYFELLSFRPLAEIEQFKQDIANGANPRDTKI 289

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
            +A EI    H    AE A  A ++ F        +P + ++  E   G+ +  L+  A 
Sbjct: 290 SLAKEIIARFHDAAAAESAHQAFIDRFQKGAIPDDIPEVELAAGE---GLAIANLLKDAD 346

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
              ST++A R +K  A+K++   I + ++ +               GK+      L 
Sbjct: 347 LVGSTSDALRMIKQGAVKMDGEKIDDSRMTLSA-----GTVAVFQVGKRKFAKVTLV 398


>gi|304409332|ref|ZP_07390952.1| tyrosyl-tRNA synthetase [Shewanella baltica OS183]
 gi|307303690|ref|ZP_07583443.1| tyrosyl-tRNA synthetase [Shewanella baltica BA175]
 gi|304351850|gb|EFM16248.1| tyrosyl-tRNA synthetase [Shewanella baltica OS183]
 gi|306912588|gb|EFN43011.1| tyrosyl-tRNA synthetase [Shewanella baltica BA175]
          Length = 397

 Score =  388 bits (998), Expect = e-106,   Method: Composition-based stats.
 Identities = 98/417 (23%), Positives = 180/417 (43%), Gaps = 26/417 (6%)

Query: 6   SDFLSILSE--RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           +D   +L+E  RG    +     L+ L     +   +G D TA  +H GH   L  L   
Sbjct: 2   ADLDQVLAEIRRGTDEILLEADLLEKLKEGRPLRIKLGADPTAPDIHLGHTVILNKLRLF 61

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q+ GH+ I L+G  T ++GDPS ++ +R  +  +++  N E  K      +     +   
Sbjct: 62  QELGHEVIFLIGDFTGMVGDPSGKNSTRPPLTREQVLANAETYKEQVYKILDPVKTR--- 118

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            +  N +WL  +    ++R + S  +V RM+  +  + R    QS++  EF Y +LQ YD
Sbjct: 119 -IEFNSSWLEPLGAAGMIR-LASKQTVARMMERDDFKKRYASGQSIAIHEFMYPLLQGYD 176

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLS 242
            V L  +    +++GG+DQ  N++ G +L +         +  PLL    G  KM K+  
Sbjct: 177 SVALQAD----VELGGTDQKFNLLMGRELQKAEGQKPQAVIMMPLLEGLDGVKKMSKSAH 232

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKK 300
             I +++        +    +I D  +  + + L+  P++EI++  +    G    + K 
Sbjct: 233 NYIGVSEPAN---EMFGKLMSISDDLMWRYFELLSFRPLAEIEQFKQDVANGSNPRDIKI 289

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
            +A EI T  H    A+ A  A ++     +    +  I +   E   G+ +  L+  A 
Sbjct: 290 ALAKEIITRFHDEASAQSAHQAFVDR-AKGMIPDDIGEIELVAGE---GLAIANLLKDAD 345

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
              ST+EA R +K  A+K++   + + ++ +               GK+      L 
Sbjct: 346 LVASTSEAMRMIKQGAVKMDGEKLDDSRMTLSA-----GTVAVFQVGKRKFAKVTLV 397


>gi|328675861|gb|AEB28536.1| Tyrosyl-tRNA synthetase cluster 1 [Francisella cf. novicida 3523]
          Length = 396

 Score =  388 bits (998), Expect = e-106,   Method: Composition-based stats.
 Identities = 94/417 (22%), Positives = 180/417 (43%), Gaps = 27/417 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M + +      + +RG    +     +  L     +    G D TA  +H GH   +  L
Sbjct: 1   MSSIQETL--EIIKRGADEVLIEEELIKKLQKNKPLIIKFGCDPTAPDIHLGHTVVINKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             LQ  GH+   L+G  T+ IGDP+ ++ +R  + ++E+  N E         +     K
Sbjct: 59  KQLQDLGHEIHFLIGDFTAQIGDPTGKNATRPPLTAEEVAANAETYTKQVFKILD----K 114

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
              ++  N  W  ++   ++++ + S  +V RML  +    R K  QS+S  EF Y ++Q
Sbjct: 115 EKTVIRRNGDWFNNMSASEMIK-LASKSTVARMLERDDFSKRYKGGQSISIHEFLYPLVQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGK 239
            YD V +  +    +++GG+DQ  N++ G +L ++        +T PLL    G  KM K
Sbjct: 174 GYDSVAMNAD----IELGGTDQKFNLLMGRELQKQQGQEPQVIITMPLLEGLDGVKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINE 297
           +    I + +        +    +I D  +  + + L+   +  I ++ +    G    +
Sbjct: 230 SSQNYIGIEEPAN---EIFGKIMSISDELMWRYYELLSFKSLETIAKLKQDVAAGANPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K  +A E+    H + +AE A    ++ F  +     +  + +S++     + +  L+ 
Sbjct: 287 IKIELAKELIERFHSKVDAESAHQDFIQRFQKNQIPDDINVVELSQE-----LPIANLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +AG   ST+EA R ++  A+KI+   +S+ K+      F    N     GK+     
Sbjct: 342 EAGLVASTSEANRMIQQGAVKIDGEKVSDGKIV-----FAKGTNNVFQVGKRKFAKI 393


>gi|308050795|ref|YP_003914361.1| tyrosyl-tRNA synthetase [Ferrimonas balearica DSM 9799]
 gi|307632985|gb|ADN77287.1| tyrosyl-tRNA synthetase [Ferrimonas balearica DSM 9799]
          Length = 395

 Score =  388 bits (998), Expect = e-106,   Method: Composition-based stats.
 Identities = 103/419 (24%), Positives = 174/419 (41%), Gaps = 28/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M         I   RG    +     +  L     +   +G D TA  +H GH   L  L
Sbjct: 1   MTDLDKALAEIC--RGTDEILVEEELVAKLKLGRPLRVKLGADPTAPDIHLGHTVILNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+ I L+G  T ++GDPS ++ +R  +  +++  N E  K      +     +
Sbjct: 59  RQFQELGHEVIFLIGDFTGMVGDPSGKNTTRPPLTREQVLANAETYKEQVFKILDPAKTR 118

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N +WL  +    +LR + S  +V RML  +  + R    QS++  EF Y +LQ
Sbjct: 119 ----IEFNSSWLGELGAEGMLR-LASQQTVARMLERDDFKKRFGGGQSIAIHEFMYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGK 239
            +D V L    +  +++GG+DQ  N++ G +L +         +T PLL    G  KM K
Sbjct: 174 GHDSVAL----EADVELGGTDQKFNLLMGRELQKDAGQSPQVVITMPLLVGLDGVKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINE 297
           + +  I ++    +P   +    +I D  + ++ + L+  P+ EI ++      G    +
Sbjct: 230 SANNYIGVS---DAPSEMFGKIMSISDDLMWNYYELLSFRPLEEIAQLKADIEAGTNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K  +A EI    H    AE A    +  F  +     MP       E   G+ +  L+ 
Sbjct: 287 VKIALAKEIIARFHDEAAAEAAHQDFINRFSKNAIPDEMPEF-----EFEAGIAIANLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +AG   +T++A R +K    KI+   I + KL          G      GK+      L
Sbjct: 342 EAGLVNTTSDAMRMIKQGGAKIDGDKIEDSKLVPAA------GTAVYQVGKRKFARITL 394


>gi|297537301|ref|YP_003673070.1| tyrosyl-tRNA synthetase [Methylotenera sp. 301]
 gi|297256648|gb|ADI28493.1| tyrosyl-tRNA synthetase [Methylotenera sp. 301]
          Length = 404

 Score =  388 bits (997), Expect = e-106,   Method: Composition-based stats.
 Identities = 102/420 (24%), Positives = 180/420 (42%), Gaps = 25/420 (5%)

Query: 3   AFKSDFLSIL--SERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
              +D    L   +RG    +     ++ L     +    G+D TA  LH GH   +  L
Sbjct: 5   ELSTDIKQQLAVIKRGADELLIEAELIEKLKKGQPLRIKAGFDPTAPDLHLGHTVLINKL 64

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+ + L+G  T +IGDP+ +  +R  + ++++QEN +         +K     
Sbjct: 65  RQFQELGHQVLFLIGDFTGMIGDPTGKSTTRPPLTAEQVQENAKSYTAQVFKILK----P 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               ++ N  WL  +    +L+   S  +V RML  +    R K  Q ++  EF Y +LQ
Sbjct: 121 EQTEVVFNSKWLTELGAAGMLKLAASH-TVARMLERDDFTKRYKANQPIAIHEFLYPLLQ 179

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGK 239
            YD V L  +    +++GG+DQ  N++ G +L ++    +   LT PLL    G  KM K
Sbjct: 180 GYDSVALKAD----VELGGTDQKFNLLMGRELQKQAGMSQQCVLTMPLLEGLDGVNKMSK 235

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINE 297
           +L   I + +   +P   +    +I D  +  + + L+   +  I +       G+    
Sbjct: 236 SLGNYIGIAE---APEVIFAKIMSISDDLMWRYIELLSFETIETIAQWKAQVAAGENPRN 292

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K   A EI    H + +AEKA                +P ISI+ +     +G+  L+ 
Sbjct: 293 IKVGFAQEIVARFHSQADAEKALADFQTR-AKGGIPDDVPEISINIE--GENIGIAQLLK 349

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            AG   ST+EA R ++   +K+++  +++  LQ+          I    GK+      + 
Sbjct: 350 LAGLVESTSEAYRAIEQGGVKLDSDKVTDRNLQLP-----KGMKIVAQVGKRKFANVTIV 404


>gi|56707811|ref|YP_169707.1| tyrosyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           SCHU S4]
 gi|110670282|ref|YP_666839.1| tyrosyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           FSC198]
 gi|224456880|ref|ZP_03665353.1| tyrosyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|254370308|ref|ZP_04986313.1| hypothetical protein [Francisella tularensis subsp. tularensis
           FSC033]
 gi|254874625|ref|ZP_05247335.1| tyrS, tyrosyl-tRNA synthetase [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|81597696|sp|Q5NGY5|SYY_FRATT RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|56604303|emb|CAG45324.1| Tyrosyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           SCHU S4]
 gi|110320615|emb|CAL08707.1| Tyrosyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           FSC198]
 gi|151568551|gb|EDN34205.1| hypothetical protein FTBG_00062 [Francisella tularensis subsp.
           tularensis FSC033]
 gi|254840624|gb|EET19060.1| tyrS, tyrosyl-tRNA synthetase [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|282158985|gb|ADA78376.1| tyrosyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           NE061598]
          Length = 396

 Score =  388 bits (997), Expect = e-106,   Method: Composition-based stats.
 Identities = 98/417 (23%), Positives = 180/417 (43%), Gaps = 27/417 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M + K      + +RG    +     +  L     +    G D TA  +H GH   +  L
Sbjct: 1   MSSIKETL--EIIKRGADEVLIEEELIKKLQKHKPLIIKFGCDPTAPDIHLGHTVVINKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             LQ  GHK   L+G  T+ IGDP+ ++ +R  + ++E+  N E         +     K
Sbjct: 59  KQLQDLGHKIHFLIGDFTAQIGDPTGKNATRPPLTAEEVAANAETYTKQVFKILD----K 114

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
              ++  N  W   +   ++++ + S  +V RML  +    R K  QS+S  EF Y ++Q
Sbjct: 115 DKTIIRRNGDWFNKMSASEMIK-LASKSTVARMLERDDFSKRYKGGQSISIHEFLYPLVQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGK 239
            YD V +  +    +++GG+DQ  N++ G +L ++        +T PLL    G  KM K
Sbjct: 174 GYDSVAMNAD----IELGGTDQKFNLLMGRELQKQQGQEPQVIITMPLLEGLDGVKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINE 297
           +    I + +        +    +I D  +  + + L+   +  I ++ +    G    +
Sbjct: 230 SSQNYIGIEEPAN---EIFGKIMSISDEFMWRYYELLSFKSLENIAKLKQDVAAGANPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K  +A E+    H +E+AE A    ++ F  +          I+  E+++ + +  L+ 
Sbjct: 287 IKIELAKELIERFHSKEDAESAHQDFIQRFQKNQIPDD-----INVVELNQELPIANLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +AG   ST+EA R ++  A+KI+   +S+ K+      F    N     GK+     
Sbjct: 342 EAGLVASTSEANRMIQQGAVKIDGEKLSDAKII-----FAKGTNNVFQVGKRKFAKI 393


>gi|289547924|ref|YP_003472912.1| tyrosyl-tRNA synthetase [Thermocrinis albus DSM 14484]
 gi|289181541|gb|ADC88785.1| tyrosyl-tRNA synthetase [Thermocrinis albus DSM 14484]
          Length = 394

 Score =  388 bits (997), Expect = e-106,   Method: Composition-based stats.
 Identities = 101/403 (25%), Positives = 175/403 (43%), Gaps = 25/403 (6%)

Query: 15  RGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG +  I    EL    ++G  +    G+D TA  LH GH+  L  L   Q  GH+   +
Sbjct: 13  RGTVE-IIEEEELRKKLAEGRPLRIKAGFDPTAPDLHLGHVVLLNKLRQFQDLGHEVYFV 71

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
           +G  T++IGDP+ R+E R  +  +E+ EN +  +      +          ++ N +W+ 
Sbjct: 72  IGDFTAMIGDPTGRNEVRPPLSREEVLENAKTYEHQVFKVLDPQKTN----VVFNSSWIT 127

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDC 193
            +    +++ + + ++V RML  +    R K    +   EF Y +LQ YD V L  +   
Sbjct: 128 PLGTEGIIK-LSAHYTVARMLERDDFSRRFKEGIPIYIHEFIYPLLQGYDSVALKAD--- 183

Query: 194 RLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMT 252
            +++GG+DQ  N++ G DL           +T PLL    G  KM K+    + L ++  
Sbjct: 184 -VELGGTDQKFNLLVGRDLQRAYGQEPQVCITLPLLVGLDGVRKMSKSYRNYVGLQED-- 240

Query: 253 SPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHG 312
            P + +    +I D  +  +   LT +   EI  M   +     +AKK +A  I    HG
Sbjct: 241 -PDSMFGKIMSISDQLMWEYYTLLTDIEEEEIKNMK--EKWHPADAKKRLAHYIVERFHG 297

Query: 313 REEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHL 372
           +E A+KA +     F      +  P + +    +        L+   G   S N ARR +
Sbjct: 298 KEAADKALSNFERTFSRKEFPEDAPVLELP---MGYRQKAFELLYSLGIENSKNSARRVI 354

Query: 373 KSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +   ++IN   I +   +I++ +      ++L  GKK      
Sbjct: 355 EGGGLRINGRRIEDPNEEIEVTE-----ELRLQVGKKRFFRIK 392


>gi|160874366|ref|YP_001553682.1| tyrosyl-tRNA synthetase [Shewanella baltica OS195]
 gi|160859888|gb|ABX48422.1| tyrosyl-tRNA synthetase [Shewanella baltica OS195]
 gi|315266601|gb|ADT93454.1| tyrosyl-tRNA synthetase [Shewanella baltica OS678]
          Length = 397

 Score =  388 bits (997), Expect = e-105,   Method: Composition-based stats.
 Identities = 97/417 (23%), Positives = 181/417 (43%), Gaps = 26/417 (6%)

Query: 6   SDFLSILSE--RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           +D   +L+E  RG    +     L+ L     +   +G D TA  +H GH   L  L   
Sbjct: 2   ADLDQVLAEIRRGTDEILLEADLLEKLKEGRPLRIKLGADPTAPDIHLGHTVILNKLRLF 61

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q+ GH+ I L+G  T ++GDPS ++ +R  +  +++  N E  K      +     +   
Sbjct: 62  QELGHEVIFLIGDFTGMVGDPSGKNSTRPPLTREQVLANAETYKEQVYKILDPVKTR--- 118

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            +  N +WL  +    ++R + S  +V RM+  +  + R    QS++  EF Y +LQ YD
Sbjct: 119 -IEFNSSWLEPLGAAGMIR-LASKQTVARMMERDDFKKRYASGQSIAIHEFMYPLLQGYD 176

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLS 242
            V L  +    +++GG+DQ  N++ G +L +         +  PLL    G  KM K+  
Sbjct: 177 SVALQAD----VELGGTDQKFNLLMGRELQKAEGQKPQAVIMMPLLEGLDGVKKMSKSAH 232

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKK 300
             I +++        +    +I D  +  + + L+  P++EI++  +    G    + K 
Sbjct: 233 NYIGVSEPAN---EMFGKLMSISDDLMWRYFELLSFRPLAEIEQFKQDVANGSNPRDIKI 289

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
            +A EI T  H    A+ A  A ++     +    +  + +   E   G+ +  L+  A 
Sbjct: 290 ALAKEIITRFHDEASAQSAHQAFVDR-AKGMIPDDIDAVELVAGE---GLAIANLLKDAD 345

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
              ST+EA R +K  A+K++   + + ++ + +             GK+      L 
Sbjct: 346 LVASTSEAMRMIKQGAVKMDGEKLDDSRMTLPV-----GTVAVFQVGKRKFAKVTLV 397


>gi|110004042|emb|CAK98382.1| probable tyrosyl-trna synthetase classIprotein [Spiroplasma citri]
          Length = 421

 Score =  388 bits (997), Expect = e-105,   Method: Composition-based stats.
 Identities = 143/426 (33%), Positives = 214/426 (50%), Gaps = 26/426 (6%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
            + L  L  RG + Q++N  +L +   +     Y G+D T  SLH GHL Q+MLL   + 
Sbjct: 4   KNILEELRWRGLLKQVTNETKL-LKAQELKKGVYCGFDPTGDSLHVGHLIQIMLLKRFEM 62

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            G +PI+++GGGT +IGDPS +   R ++  + I+ N+E I       I          M
Sbjct: 63  FGFQPITIIGGGTGMIGDPSGKKAERVLLDDKTIKHNVETISQQMHQLI-----GAKIKM 117

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  WL  +  ID LR +G  F+++ +L+ E++ +R+  E  LS+ EF Y +LQAYDF 
Sbjct: 118 VNNAEWLQKMTLIDFLRNVGKDFNISYLLAKENIATRI--EVGLSYTEFAYTLLQAYDFY 175

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK--LFALTSPLLTTASGTKMGKTLSG 243
           +L  NYDC +Q GGSDQWGNI  G D   +          LT  LLT A G+K GKT SG
Sbjct: 176 QLYINYDCAVQTGGSDQWGNITSGTDYIYKQIGEDNLACGLTMNLLTKADGSKFGKTESG 235

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKI 301
           A+WL+ + TSPY F+Q++ N DD +     + LT L   +I  +      E      +K 
Sbjct: 236 AVWLDSKKTSPYEFYQFFYNQDDQETAKLLRYLTMLSEKKIIALETAHQNEPTQRIVQKK 295

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMG 351
           +A E+T  VH     + A   +   F  S+H             +P   ++    +  + 
Sbjct: 296 LAEEVTLFVHQAAGLKTAQIVSEALFKGSLHELSEQQLEQLHNSLPNFHLT----NFNLP 351

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           LL L+++A   TS  E R  L+  AI IN  II  E   +    F     + +  GK+ +
Sbjct: 352 LLDLLIQAEIVTSKREGREFLEQAAITINGQIIKEETWTLAKDKFLFNKYLIIRRGKRKY 411

Query: 412 IICHLC 417
            + +L 
Sbjct: 412 HLIYLT 417


>gi|82523698|emb|CAI78479.1| tyrosyl-tRNA synthetase [uncultured beta proteobacterium]
          Length = 402

 Score =  388 bits (997), Expect = e-105,   Method: Composition-based stats.
 Identities = 93/416 (22%), Positives = 173/416 (41%), Gaps = 23/416 (5%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
              D L  +  RG    +     L+ L +   +    G+D TA  LH GH   L  L   
Sbjct: 6   LMQDVLQEIK-RGTDELLVEAELLEKLKTGRPLRIKAGFDPTAPDLHLGHTVLLNKLRQF 64

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q+ GH+ + L+G  T +IGDP+ ++ +R  +  + + EN +  +      +     +   
Sbjct: 65  QQLGHQVVFLIGDFTGMIGDPTGKNTTRPPLTREAVAENAKTYQEQVFKILDPALTE--- 121

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            +  N  W+  +  + ++R   +  +V RML  +    R   +Q ++  EF Y ++Q YD
Sbjct: 122 -VRFNSEWMEGLGSVGMIRLAATH-TVARMLERDDFHKRYTGQQPIAIHEFLYPLIQGYD 179

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLS 242
            V L  +    +++GG+DQ  N++ G +L +    P    LT PLL    G  KM K+L 
Sbjct: 180 SVALKAD----IELGGTDQKFNLLMGRELQKHHGQPAQCILTMPLLEGTDGVNKMSKSLG 235

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKK 300
             I +N+    P   +    +I D  +  +   L+   +  I    +    G      K 
Sbjct: 236 NYIGINEP---PQEIFGKLMSISDELMWRYIHLLSFESLQTIASWKQQVADGANPRNIKV 292

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
             A EI    H    A +A       F        MP IS+    +   + +  L+ +AG
Sbjct: 293 RFAQEIVARFHDAAAATQALADFEARFQKGALPDEMPEISLPG--IEGALLVPQLLKQAG 350

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             +ST++A R +    ++++   ++++ + + +        +    GK+      +
Sbjct: 351 LVSSTSDAMRQIAGGGVRLDGERVADKGVAVPV-----GATVVAQVGKRKFARVTI 401


>gi|288818270|ref|YP_003432618.1| tyrosyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
 gi|288787670|dbj|BAI69417.1| tyrosyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
 gi|308751867|gb|ADO45350.1| tyrosyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
          Length = 393

 Score =  388 bits (997), Expect = e-105,   Method: Composition-based stats.
 Identities = 109/404 (26%), Positives = 180/404 (44%), Gaps = 24/404 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L ++G +  I     L  L     +    G+D TA  LH GH   L  +   Q+ GH+  
Sbjct: 9   LIKKGTVEIIEEEELLRKLKEGRPLKVKAGFDPTAPDLHLGHTVLLQKMRTFQQLGHEVY 68

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            ++G  T++IGDP+ R E+R  +  +++ EN +  +      +          ++ N TW
Sbjct: 69  FVIGDFTAMIGDPTGRLETRPPLTREQVIENAKTYEHQVFKVLD----PEKTNIVFNSTW 124

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L ++    +++  G + +V RML  +    R K    +   EF Y +LQ YD V L  + 
Sbjct: 125 LSTLGTEGVIKLAGKY-TVARMLERDDFSKRFKEGIPIYIHEFLYPLLQGYDSVFLKAD- 182

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G DL           +T PLL    G  KM K+    I L ++
Sbjct: 183 ---VELGGTDQKFNLLVGRDLQREAGLEPQVCITLPLLVGLDGVRKMSKSYGNYIGLTED 239

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMV 310
              PY  +    +I D  +  +   LT     EI+R+ +L      EAKK +A  I +  
Sbjct: 240 ---PYTMFGKTMSISDQLMWEYYTLLTDYTQEEIERIKELH---PMEAKKRLAHYIVSRY 293

Query: 311 HGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARR 370
           H +EEA++A       F      +  P I +   E         L+ + G  +S N ARR
Sbjct: 294 HSKEEADRALDNFERTFSKREFPEDAPVIKV---ERGLKRKAYELLYELGIESSKNSARR 350

Query: 371 HLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            ++   +KIN   I +E  +I++++      +KL  GKK     
Sbjct: 351 VIQGGGLKINFQKIEDENQEIEIKE-----ELKLQVGKKRFYRI 389


>gi|85711799|ref|ZP_01042855.1| Tyrosyl-tRNA synthetase [Idiomarina baltica OS145]
 gi|85694414|gb|EAQ32356.1| Tyrosyl-tRNA synthetase [Idiomarina baltica OS145]
          Length = 400

 Score =  388 bits (997), Expect = e-105,   Method: Composition-based stats.
 Identities = 95/417 (22%), Positives = 187/417 (44%), Gaps = 23/417 (5%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M    ++ ++ ++ RG    +      D L     +    G+D TA  LH GH   +  L
Sbjct: 1   MTPQVAEAIAEIT-RGADEVLIESELADKLEQGKPLIIKAGFDPTAPDLHLGHTVLINKL 59

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GHK + L+G  T +IGDP+ ++ +R+ +  +++  N E  K      +      
Sbjct: 60  RVFQDYGHKVVFLIGDFTGMIGDPTGKNVTRKPLTREDVLANAETYKEQVFKILD----P 115

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           T   +  N  W+ ++    +++ + +  +V RML  +  + R +  QS++  EF Y ++Q
Sbjct: 116 TKTEIRFNSEWMNNLGADGMIK-LAARQTVARMLERDDFKKRYQANQSIAIHEFLYPLVQ 174

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGK 239
            +D VEL  +    ++MGG+DQ  N++ G +L +         +  PLL    G  KM K
Sbjct: 175 GWDSVELKAD----VEMGGTDQRFNLLMGRELQKEEGQRPQTVIMMPLLEGLDGVQKMSK 230

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINE 297
           +L+  I + +        +    +I D  +  + + L+  P+ +++   +    G+    
Sbjct: 231 SLNNYIGITEPAN---EMFGKVMSISDELMWRYFELLSFRPLEQVEDFKQQVADGENPRN 287

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A EI    H    A+KA    ++ F  +     +  + +   +   G+ +   + 
Sbjct: 288 IKVLLAKEIIARFHDEAAADKAEQDFIQRFQKNAIPDDIKEVEVKVGD--DGIAIGNALK 345

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +AG  +ST++A R +K +A+K +   I++ KL    +D   +G      GK+     
Sbjct: 346 EAGLVSSTSDAMRMIKQSAVKRDGEKITDTKLMCTKED---SGVY--QVGKRKFAKI 397


>gi|218288874|ref|ZP_03493125.1| tyrosyl-tRNA synthetase [Alicyclobacillus acidocaldarius LAA1]
 gi|218240963|gb|EED08140.1| tyrosyl-tRNA synthetase [Alicyclobacillus acidocaldarius LAA1]
          Length = 413

 Score =  388 bits (996), Expect = e-105,   Method: Composition-based stats.
 Identities = 101/410 (24%), Positives = 179/410 (43%), Gaps = 31/410 (7%)

Query: 15  RGFIHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
           RG   +I    EL     +       +   +G D T+S +H GH   L  L   Q  GH+
Sbjct: 24  RGT-AEIVPEDELVQKLRESVRTGRPLRVKLGIDPTSSDIHLGHTVVLHKLRQFQDLGHQ 82

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
              ++G  T  IGDP+ + E+R+ + ++E+ EN +         +          ++ N 
Sbjct: 83  VFLVIGSFTGQIGDPTDKAETRKQLSAEEVAENAKTYVAQLYKILD----PEKTQVVYNG 138

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
            WL  + +  ++R + S  +V RML  E  + R +  + +   EF Y ++QAYD V L  
Sbjct: 139 DWLAPLDFAQVIR-LASTITVARMLEREDFQKRFQDNRPIHVHEFFYPLMQAYDSVHLRA 197

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLN 248
           +    +++GG+DQ  N++ G  L      P   A+  PLL    G  KM K+L   I +N
Sbjct: 198 D----VELGGTDQKFNLLMGRHLQREFGQPMQVAVMLPLLEGLDGVNKMSKSLGNYIGVN 253

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAKKIIATE 305
           +E   P N +    ++ D+ +  + + L+  P  EI+ M +          +AK  +A E
Sbjct: 254 EE---PNNMFGKLMSVPDSLLFKYYELLSLRPQDEIEAMRREVEAGRMNPRDAKMQLAEE 310

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           +     G E   +A       F        +P   ++         ++  +V  G A S 
Sbjct: 311 LVERFLGPEARREAVEHWRTVFQKGGLPDDIPERRVA----GEAQWIVKWLVDLGLAQSN 366

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           ++ARR ++  A+++N + +++   Q + QD D      L  GK+  +   
Sbjct: 367 SDARRAIQEGAVRLNGNKVTDTDFQYRPQDGD-----VLQRGKRQFVRLR 411


>gi|254372949|ref|ZP_04988438.1| tyrosyl-tRNA synthetase [Francisella tularensis subsp. novicida
           GA99-3549]
 gi|151570676|gb|EDN36330.1| tyrosyl-tRNA synthetase [Francisella novicida GA99-3549]
          Length = 396

 Score =  388 bits (996), Expect = e-105,   Method: Composition-based stats.
 Identities = 96/417 (23%), Positives = 179/417 (42%), Gaps = 27/417 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M + K      + +RG    +     +  L     +    G D TA  +H GH   +  L
Sbjct: 1   MSSIKETL--EIIKRGADEVLIEEELIKKLQKNKPLIIKFGCDPTAPDIHLGHTVVINKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             LQ  GH+   L+G  T+ IGDP+ ++ +R  + ++E+  N E         +     K
Sbjct: 59  KQLQDLGHEIHFLIGDFTAQIGDPTGKNATRPPLTAEEVAANAETYTKQVFKILD----K 114

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
              ++  N  W   +   ++++ + S  +V RML  +    R K  QS+S  EF Y ++Q
Sbjct: 115 DKTVIRRNGDWFNKMSASEMIK-LASKSTVARMLERDDFSKRYKGGQSISIHEFLYPLVQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGK 239
            YD V +  +    +++GG+DQ  N++ G +L ++        +T PLL    G  KM K
Sbjct: 174 GYDSVAMNAD----IELGGTDQKFNLLMGRELQKQQGQEPQVIITMPLLEGLDGVKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINE 297
           +    I + +        +    +I D  +  + + L+   +  I ++ +    G    +
Sbjct: 230 SSQNYIGIEEPAN---EIFGKIMSISDELMWRYYELLSFKSLENIAKLKQDVAAGANPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K  +A E+    H + +AE A    ++ F  +          I+  E+++ + +  L+ 
Sbjct: 287 IKIELAKELIERFHSKGDAESAHQDFIQRFQKNQIPDD-----INVVELNQELPIANLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +AG   ST+EA R ++  A+KI+   +S+ K+      F    N     GK+     
Sbjct: 342 EAGLVASTSEANRMIQQGAVKIDGEKLSDGKII-----FAKGTNSVFQVGKRKFAKI 393


>gi|303230712|ref|ZP_07317459.1| tyrosine--tRNA ligase [Veillonella atypica ACS-049-V-Sch6]
 gi|302514472|gb|EFL56467.1| tyrosine--tRNA ligase [Veillonella atypica ACS-049-V-Sch6]
          Length = 402

 Score =  388 bits (996), Expect = e-105,   Method: Composition-based stats.
 Identities = 99/410 (24%), Positives = 179/410 (43%), Gaps = 30/410 (7%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           I++E   + +I        +     +   +G D TA  +H GH   L  L   Q+ GH+ 
Sbjct: 18  IINEEDLVKKI-----ERSIKENKPLIVKLGLDPTAPDIHLGHTVPLRKLRLFQEFGHQV 72

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           + ++GG T+ IGDP+ +  +R  +  +E+ +N E  K      +         ++ +N  
Sbjct: 73  VIVIGGFTARIGDPTGKSVTRPPLTKEEVLKNAETYKTQIFKVLD----PEKTIVRDNSE 128

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           WL S+ + D+LR + S ++V RM+  +    R K  + +   EF Y ++Q  D V L  +
Sbjct: 129 WLESMNFADVLR-LASSYTVARMMERDDFDKRYKEGRPIGVHEFMYPLMQGQDSVALHAD 187

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNK 249
               ++ GG+DQ  N++ G  L E         +T PLL    G  KM K+L   I +++
Sbjct: 188 ----VEFGGTDQTFNLLMGRHLQELAGQEPQVVITMPLLEGLDGVQKMSKSLGNYIGIDE 243

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAKKIIATEI 306
              +P + +    +I D  ++ +   +T + + + D M +          +AK  +A  I
Sbjct: 244 ---APKDMYGKAMSIPDELMMRYFMLVTDMSIEDQDDMEERLENGTLHPRDAKMQLAKTI 300

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
             + HG + A++A       F        +P  +I  D+ S  + +      AG   S  
Sbjct: 301 VRLYHGEQAAQEAEDEFKRVFQQHALPTDIPEYAI--DKPSEAIFVPQFCTDAGLTASNG 358

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           EARR +K+ A K+N      E L ++         + +  GK+  +    
Sbjct: 359 EARRSIKAGAFKVNGEKYGEENLVLEDG-------MIVQVGKRKFVKIKF 401


>gi|239817633|ref|YP_002946543.1| tyrosyl-tRNA synthetase [Variovorax paradoxus S110]
 gi|239804210|gb|ACS21277.1| tyrosyl-tRNA synthetase [Variovorax paradoxus S110]
          Length = 410

 Score =  387 bits (995), Expect = e-105,   Method: Composition-based stats.
 Identities = 98/413 (23%), Positives = 180/413 (43%), Gaps = 30/413 (7%)

Query: 11  ILSERGFIHQISNPRELDILCSQG----VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
            +S RG    +     +  L         +   +G D TA  +H GH   L  +  LQ  
Sbjct: 20  EISLRGTDELLPQDEWVRKLQRSEASGTPLRIKLGLDPTAPDIHIGHTVVLNKMRQLQDL 79

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+ I L+G  T+ IGDPS R+ +R  +  ++I+ N +      S  +     +    + 
Sbjct: 80  GHRVIFLIGDFTTTIGDPSGRNSTRPPLTREQIEANAQTYYRQASLVLDPEKTE----IR 135

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
            N  W   +    ++ ++ + ++V RM+  +    R K  QS+S  EF Y ++Q YD V 
Sbjct: 136 YNSEWSDPLGARGMI-QLAAKYTVARMMERDDFNKRFKAGQSISVHEFLYPLMQGYDSVA 194

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAI 245
           L  +    L++GG+DQ  N++ G  L +         LT PLL    G  KM K+ +  I
Sbjct: 195 LKSD----LELGGTDQKFNLLVGRHLQQEYGQEPQCILTMPLLEGLDGVEKMSKSKNNYI 250

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIA 303
            ++++  +    +    +I D  +  +   L+   +++I+ +      G+   +AK  +A
Sbjct: 251 GISEDANT---MFAKVLSISDELMWRWYTLLSFQSLAQIEALKAEIAAGRNPKDAKVALA 307

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
            EIT   H    AE A    +           +P +S+        +G+  L+ +AG A 
Sbjct: 308 KEITARFHSAAAAETAEQDFINR-SKGGVPDDIPELSLG----GAPLGIAQLLKQAGLAP 362

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           S +E  R +    +++++ +IS++ L++        G   +  GK+      L
Sbjct: 363 SASEGNRLIDGGGVRVDSVVISDKALKLPA------GRYVVQVGKRKFARVTL 409


>gi|206900875|ref|YP_002251199.1| tyrosyl-tRNA synthetase [Dictyoglomus thermophilum H-6-12]
 gi|206739978|gb|ACI19036.1| tyrosyl-tRNA synthetase [Dictyoglomus thermophilum H-6-12]
          Length = 405

 Score =  387 bits (995), Expect = e-105,   Method: Composition-based stats.
 Identities = 104/417 (24%), Positives = 185/417 (44%), Gaps = 32/417 (7%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFW 62
            KS+ + I+ E G         +L     +G  +   +G D +A  LH GH   L  L  
Sbjct: 14  LKSNVVEIIPEDGLY------EKLKKAREEGRPLRVKLGADPSAPDLHLGHAVVLRKLKQ 67

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD 122
            Q  GH+ + ++G  T+ IGDPS R E+R+ +  +++++N    +      +      + 
Sbjct: 68  FQDLGHQVVFIIGDFTARIGDPSGRSETRKPLTPEQVKKNALTYQEQVGKILDV----SK 123

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
           A +   E W   +K  D+L  + S +++ RML  +    R K ++ +   E  Y +LQAY
Sbjct: 124 AEIRYQEEWFGKMKLEDVL-VLTSKYTIARMLERDDFAQRFKEQKPIFIHEIMYPLLQAY 182

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTL 241
           D V +  +    +++GG+DQ  N+I G ++          A+  P+L    G  KM K+L
Sbjct: 183 DSVAIKAD----IELGGTDQKFNLIVGREIQREYGLEPQVAMLMPILEGLDGKQKMSKSL 238

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEA 298
              I L +    P   +    +I D  ++ + +  T LP  EI ++ +   +      +A
Sbjct: 239 GNYIGLTE---PPNQMYGKVMSIPDELIIRYFELATELPKEEIRKIEQEMREGKLNPRDA 295

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVK 358
           K  +A EI  + HG E + KA       F      +++P + IS       + ++ L+ +
Sbjct: 296 KARLAREIVKIYHGEEASLKAEEEFNRIFRNKELPENVPEVEIS----EPKIWIVKLLTQ 351

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            G A S +EA+R +   A++I+ + I +  L I +          L  GK       
Sbjct: 352 VGAAKSNSEAKRLISQGAVEIDGTRIEDINLDISI-----DKPFILRVGKHFFRRIK 403


>gi|269468935|gb|EEZ80519.1| Tyrosyl-tRNA synthetase [uncultured SUP05 cluster bacterium]
          Length = 394

 Score =  387 bits (995), Expect = e-105,   Method: Composition-based stats.
 Identities = 101/408 (24%), Positives = 181/408 (44%), Gaps = 28/408 (6%)

Query: 14  ERGFIHQISNPRELDILCSQ-GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPIS 72
           ERG  H+I    EL    ++   +    G+D TA  LH GH   +  L  LQ  GH+ + 
Sbjct: 11  ERGA-HEILPVDELKKKLAKNKPLRIKAGFDPTAPDLHLGHTVLINKLKQLQDLGHEILF 69

Query: 73  LMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL 132
           L+G  T++IGDP+ + ++R  +  +++ +N E  +      +     K    ++ N  W+
Sbjct: 70  LIGDFTAMIGDPTGKSKTRPPLSKEQVLKNAESYQDQVFKILDKDKTK----VVFNSDWI 125

Query: 133 CSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYD 192
             +  ++++ ++ S  ++ RML       R K  Q ++  EF Y ++Q  D VEL  +  
Sbjct: 126 GKMSALEMI-QLASQKTMARMLERNDFSDRYKAGQDIAIHEFLYPLIQGRDSVELKAD-- 182

Query: 193 CRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEM 251
             +++GG+DQ  N++ G DL ++        LT P+L    G  KM K+L   I ++   
Sbjct: 183 --VELGGTDQKFNLLMGRDLQKQAGMESQVILTMPILEGLDGVQKMSKSLDNYIGID--- 237

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKKIIATEITTM 309
             P + +    +I D  +  + + L+   +  I         G+     K  +A EI T 
Sbjct: 238 DKPDDMFGKIMSISDDLMWRYLELLSFETLETIASWKTEVENGENPRNIKFRLADEIITR 297

Query: 310 VHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEAR 369
            H  ++A++A    +  F  +     MP  S        G+ +  L+  +G  +ST++A 
Sbjct: 298 FHSSDDAKQAQQNFINRFAKNKVPDEMPEFS-----FESGIKIANLLKDSGLVSSTSDAF 352

Query: 370 RHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           R +K  A KI    IS+  L  +      +G      GK+      + 
Sbjct: 353 RMIKEGAAKIEGEKISDRNLVPE------SGTAVYQVGKRKFAKVTIT 394


>gi|146308941|ref|YP_001189406.1| tyrosyl-tRNA synthetase [Pseudomonas mendocina ymp]
 gi|145577142|gb|ABP86674.1| tyrosyl-tRNA synthetase [Pseudomonas mendocina ymp]
          Length = 399

 Score =  387 bits (995), Expect = e-105,   Method: Composition-based stats.
 Identities = 99/408 (24%), Positives = 175/408 (42%), Gaps = 24/408 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG    +     ++ L     +    G+D TA  LH GH   +  L   Q+ GH+ I
Sbjct: 10  LIKRGAEEVLVEAELVEKLKRGQPLRIKAGFDPTAPDLHLGHTVLINKLRQFQELGHQVI 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T +IGDPS +  +R  +  +++ +N E  K      +     +    +  N TW
Sbjct: 70  FLIGDFTGMIGDPSGKSATRPPLTREQVLDNAETYKQQVFKILDPAKTE----VAFNSTW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +  +K  D +R + S ++V RML  +    R    Q ++  EF Y ++Q YD V L  + 
Sbjct: 126 MDQLKPADFIR-LASQYTVARMLERDDFDKRYTSNQPIAIHEFLYPLVQGYDSVALKAD- 183

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G +L           +T PLL    G  KM K+L   + + + 
Sbjct: 184 ---VELGGTDQKFNLLMGRELQRAYGQESQCIVTMPLLEGLDGVKKMSKSLGNYVGIQE- 239

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATEITT 308
             +P   +    ++ DA +  + + L+   M EI++  +   QG    + K  +A E+  
Sbjct: 240 --APGVMYSKLVSMPDALMWRYFELLSFRSMEEIEQFKRDVQQGANPRDIKIKLAEELVA 297

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
             HG E A  A  +A          + +P + +   E    M + +++ KAG   +   A
Sbjct: 298 RFHGEEAAANAHRSAGNRMRDGELPEDLPEVELVSAE---DMPISSVLNKAGLVKNAAVA 354

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           R  L S  ++++  ++    L      F          GK+      L
Sbjct: 355 RDLLGSGGVRVDGEVVDRAFL------FKVGATHVCQAGKRAFARITL 396


>gi|149909291|ref|ZP_01897947.1| tyrosyl-tRNA synthetase [Moritella sp. PE36]
 gi|149807608|gb|EDM67556.1| tyrosyl-tRNA synthetase [Moritella sp. PE36]
          Length = 398

 Score =  387 bits (995), Expect = e-105,   Method: Composition-based stats.
 Identities = 101/416 (24%), Positives = 176/416 (42%), Gaps = 26/416 (6%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +D L  +  RG    +     +  L     +   +G D T + LH GH   L  L   Q 
Sbjct: 5   NDALREIK-RGTEEILVEEELVAKLKEGRPLRIKLGADPTGADLHLGHTVILNKLRQFQD 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+ I L+G  T+ +GDPS ++ +R  +  +++  N +         +     ++   +
Sbjct: 64  LGHEVIFLIGDFTATVGDPSGKNSTRPPLTREDVLVNAKTYTDQVFKILD----ESKTRI 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
             N TWL  +    ++R + S  +V RML  +  + R    Q ++  EF Y +LQ YD V
Sbjct: 120 EFNSTWLNELGAAGIIR-LASQQTVARMLERDDFKKRYASGQGIAIHEFMYPLLQGYDSV 178

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGA 244
            L  +    +++GG+DQ  N++ G +L +         +  PLL    G  KM K+ +  
Sbjct: 179 ALKAD----VELGGTDQKFNLLMGRELQKAEGQKPQTVIMMPLLVGLDGVKKMSKSSNNY 234

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKI 301
           I +     +P   +    +I D  + ++ + L+  P++EI++             + K  
Sbjct: 235 IGVT---DAPNEMFGKIMSITDELMWNYFELLSFRPLAEIEKFKADIAADAVNPRDVKIS 291

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGF 361
           +A EI    H    AE A     + F  +     MP    +   VS  M +  L+ +AG 
Sbjct: 292 LAKEIIARFHDEAAAESAHNDFTQRFSKNSIPDEMPEFDFA---VSDAMAIANLLKEAGL 348

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            + T+EA R +K  A+KI++  I + +L          G      GK+      L 
Sbjct: 349 VSGTSEAMRMIKQGAVKIDSVKIDDTRLVPTA------GTAVYQVGKRKFARITLA 398


>gi|258406326|ref|YP_003199068.1| tyrosyl-tRNA synthetase [Desulfohalobium retbaense DSM 5692]
 gi|257798553|gb|ACV69490.1| tyrosyl-tRNA synthetase [Desulfohalobium retbaense DSM 5692]
          Length = 399

 Score =  387 bits (994), Expect = e-105,   Method: Composition-based stats.
 Identities = 103/406 (25%), Positives = 168/406 (41%), Gaps = 26/406 (6%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            L  RG    I+    L+ L     +T   G+D TA  LH GH   +  L   Q+ GH  
Sbjct: 6   ELIRRGSEEIINEEELLERLRGDRPLTIKAGFDPTAPDLHLGHTVLIQKLKHFQELGHNV 65

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           + L+G  T +IGDPS + E+R+ +  +E++ N E  K      +     +    +  N  
Sbjct: 66  VFLIGDFTGMIGDPSGKSETRKALTREEVRINAETYKRQIFRILD----REKTRIAFNAE 121

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           W+ S    D +  + S ++V RML  +    R +  + +S  EF Y ++Q YD V L  +
Sbjct: 122 WMDSFSAADFV-HLCSQYTVARMLERDDFAKRYQANKPISVHEFLYPLVQGYDSVALQAD 180

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNK 249
               +++GG+DQ  N++ G  L           LT P+L    G  KM K+L   + + +
Sbjct: 181 ----VELGGTDQKFNLLMGRTLQREYGQTPQVILTMPILEGLDGVQKMSKSLGNYVGIEE 236

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAKKIIATEI 306
                 + +    +I D  +  + + L+ L +  I  +             AK+ +A EI
Sbjct: 237 PAQ---DMFGKLMSISDELMWRYFELLSDLSLEAIAALQAQVASGELHPKAAKEQLAFEI 293

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
           T   H   EAEKA       F      + MP I I+ +E      ++  I  +G   S  
Sbjct: 294 TERFHSTAEAEKAKANFANVFSQHQLPEDMPEIRIAPEE----ASVIATIDHSGLCASRA 349

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           E +R  K  A+  +   ++         D  + G      GKK   
Sbjct: 350 EIKRLCKQGAVTCDGEKVT------AFGDMLAPGEHVFKIGKKRFF 389


>gi|126173409|ref|YP_001049558.1| tyrosyl-tRNA synthetase [Shewanella baltica OS155]
 gi|217974300|ref|YP_002359051.1| tyrosyl-tRNA synthetase [Shewanella baltica OS223]
 gi|125996614|gb|ABN60689.1| tyrosyl-tRNA synthetase [Shewanella baltica OS155]
 gi|217499435|gb|ACK47628.1| tyrosyl-tRNA synthetase [Shewanella baltica OS223]
          Length = 397

 Score =  387 bits (994), Expect = e-105,   Method: Composition-based stats.
 Identities = 96/417 (23%), Positives = 180/417 (43%), Gaps = 26/417 (6%)

Query: 6   SDFLSILSE--RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           +D   +L+E  RG    +     L+ L     +   +G D TA  +H GH   L  L   
Sbjct: 2   ADLDQVLAEIRRGTDEILLEADLLEKLKEGRPLRIKLGADPTAPDIHLGHTVILNKLRLF 61

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q+ GH+ I L+G  T ++GDPS ++ +R  +  +++  N E  K      +     +   
Sbjct: 62  QELGHEVIFLIGDFTGMVGDPSGKNSTRPPLTREQVLANAETYKEQVYKILDPVKTR--- 118

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            +  N +WL  +    ++R + S  +V RM+  +  + R    QS++  EF Y +LQ YD
Sbjct: 119 -IEFNSSWLEPLGAAGMIR-LASKQTVARMMERDDFKKRYASGQSIAIHEFMYPLLQGYD 176

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLS 242
            V L  +    +++GG+DQ  N++ G +L +         +  PLL    G  KM K+  
Sbjct: 177 SVALQAD----VELGGTDQKFNLLMGRELQKAEGQKPQAVIMMPLLEGLDGVKKMSKSAH 232

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKK 300
             I +++        +    +I D  +  + + L+  P++EI++  +    G    + K 
Sbjct: 233 NYIGVSEPAN---EMFGKLMSISDDLMWRYFELLSFRPLAEIEQFKQDVANGSNPRDIKI 289

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
            +A EI T  H    A+ A  A ++     +    +  + +   +   G+ +  L+  A 
Sbjct: 290 ALAKEIITRFHDEASAQSAHQAFVDR-AKGMIPDDIDAVELVAGD---GLAIANLLKDAD 345

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
              ST+EA R +K  A+K++   + + ++ +               GK+      L 
Sbjct: 346 LVASTSEAMRMIKQGAVKMDGEKLDDSRMILSA-----GTVAVFQVGKRKFAKVTLV 397


>gi|303228359|ref|ZP_07315193.1| tyrosine--tRNA ligase [Veillonella atypica ACS-134-V-Col7a]
 gi|302516972|gb|EFL58880.1| tyrosine--tRNA ligase [Veillonella atypica ACS-134-V-Col7a]
          Length = 402

 Score =  387 bits (994), Expect = e-105,   Method: Composition-based stats.
 Identities = 98/410 (23%), Positives = 178/410 (43%), Gaps = 30/410 (7%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           I++E   + +I        +     +   +G D TA  +H GH   L  L   Q+ GH+ 
Sbjct: 18  IINEEDLVKKI-----ERSIKENKPLIVKLGLDPTAPDIHLGHTVPLRKLRLFQEFGHQV 72

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           + ++GG T+ IGDP+ +  +R  +  +E+ +N E  K      +         ++ +N  
Sbjct: 73  VIVIGGFTARIGDPTGKSVTRPPLTKEEVLKNAETYKTQIFKVLD----PEKTIVRDNSE 128

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           WL S+ + D+LR + S ++V RM+  +    R K  + +   EF Y ++Q  D V L  +
Sbjct: 129 WLESMNFADVLR-LASSYTVARMMERDDFDKRYKEGRPIGVHEFMYPLMQGQDSVALHAD 187

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNK 249
               ++ GG+DQ  N++ G  L +         +T PLL    G  KM K+L   I +++
Sbjct: 188 ----VEFGGTDQTFNLLMGRHLQDLAGQEPQVVITMPLLEGLDGVQKMSKSLGNYIGIDE 243

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAKKIIATEI 306
               P + +    +I D  ++ +   +T + + + D M +          +AK  +A  I
Sbjct: 244 ---VPKDMYGKAMSIPDELMMRYFMLVTDMSIEDQDDMEERLENGTLHPRDAKMQLAKTI 300

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
             + HG + A++A       F        +P  +I  D+ S  + +      AG   S  
Sbjct: 301 VRLYHGEQAAQEAEDEFKRVFQQHALPTDIPEYAI--DKPSEAIFVPQFCTDAGLTASNG 358

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           EARR +K+ A K+N      E L ++         + +  GK+  +    
Sbjct: 359 EARRSIKAGAFKVNGEKYGEENLVLEDG-------MIVQVGKRKFVKIKF 401


>gi|208779384|ref|ZP_03246730.1| tyrosyl-tRNA synthetase [Francisella novicida FTG]
 gi|208745184|gb|EDZ91482.1| tyrosyl-tRNA synthetase [Francisella novicida FTG]
          Length = 396

 Score =  387 bits (994), Expect = e-105,   Method: Composition-based stats.
 Identities = 96/414 (23%), Positives = 179/414 (43%), Gaps = 27/414 (6%)

Query: 6   SDFLSILS--ERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           S+    L   +RG    +     +  L     +    G D TA  +H GH   +  L  L
Sbjct: 2   SNIKETLEIIKRGADEVLIEEELIKKLQKNKPLIIKFGCDPTAPDIHLGHTVVINKLKQL 61

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q  GH+   L+G  T+ IGDP+ ++ +R  + ++E+  N E         +     K   
Sbjct: 62  QDLGHEIHFLIGDFTAQIGDPTGKNATRPPLTAEEVAANAETYTKQVFKILD----KDKT 117

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           ++  N  W   +   ++++ + S  +V RML  +    R K  QS+S  EF Y ++Q YD
Sbjct: 118 VIRRNGDWFNKMSASEMIK-LASKSTVARMLERDDFSKRYKGGQSISIHEFLYPLVQGYD 176

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLS 242
            V +  +    +++GG+DQ  N++ G +L ++        +T PLL    G  KM K+  
Sbjct: 177 SVAMNAD----IELGGTDQKFNLLMGRELQKQQGQEPQVIITMPLLEGLDGVKKMSKSSQ 232

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKK 300
             + + +        +    +I D  +  + + L+   +  I ++ +    G    + K 
Sbjct: 233 NYVGIEEPAN---EIFGKIMSISDELMWRYYELLSFKSLENIAKLKQDVAAGANPRDIKI 289

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
            +A E+    H +E+AE A    ++ F  +          I+  E+++ + +  L+ +AG
Sbjct: 290 ELAKELIERFHSKEDAEIAHQDFIQRFQKNQIPDD-----INVVELNQELPIANLLKEAG 344

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
              ST+EA R ++  A+KI+   +S+ K+      F    N     GK+     
Sbjct: 345 LVASTSEANRMIQQGAVKIDGEKLSDGKII-----FAKGTNNVFQVGKRKFAKI 393


>gi|134299504|ref|YP_001113000.1| tyrosyl-tRNA synthetase [Desulfotomaculum reducens MI-1]
 gi|134052204|gb|ABO50175.1| tyrosyl-tRNA synthetase [Desulfotomaculum reducens MI-1]
          Length = 407

 Score =  386 bits (993), Expect = e-105,   Method: Composition-based stats.
 Identities = 105/422 (24%), Positives = 184/422 (43%), Gaps = 30/422 (7%)

Query: 7   DFLSILS--ERGFIHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLML 59
           DF   L    RG + +I    EL     +       +   +G D +A  +H GH   L  
Sbjct: 3   DFQKQLEIIRRG-VAEIVPEEELVEKLKKSVASNKPLHIKLGLDPSAPDIHLGHTVVLQK 61

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG 119
           L   Q+ GH    ++G  T  IGDP+ +  +R+ +  +E+  N    +      +     
Sbjct: 62  LRQFQELGHNITIILGDFTGRIGDPTGKSVARKPLTEEEVLANARTYEQQIFKILDPEKT 121

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
           K    +  N TWL  +K+ D+++ + +  +V RML  E    R++    +S  EF Y ++
Sbjct: 122 K----VHFNSTWLAPLKFEDVIK-LAATTTVARMLEREDFTKRMRENLPISIHEFFYPLM 176

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMG 238
           Q YD V L    +  ++MGG+DQ  N++ G  L +        A+  P+L    G  KM 
Sbjct: 177 QGYDSVAL----EADIEMGGTDQKFNLLMGRTLQKEFGQEPQVAIMMPILEGLDGVNKMS 232

Query: 239 KTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSE---IDRMAKLQGKEI 295
           K+L   I +++    P   +    ++ D  +V + + +T +P+ E   I +  +      
Sbjct: 233 KSLGNYIGIDE---PPQEMYGKTMSLPDELMVRYFELVTPVPLEEVKAIAKGLEDGSLHP 289

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGM-GLLT 354
            + K  +  EI T  HG E A +A       F        +    +S D +  G+  L  
Sbjct: 290 RDVKMRLGREIVTFYHGPEAALQAEDHFKTVFQKGEIPDEIDEFLVSGDLLEEGLVALPK 349

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           L+ +A  A + +EARR +K  A+KIN    ++  +++K Q+      + +  GK+     
Sbjct: 350 LLTQAKLAGTNSEARRLIKEGAVKINGEKATDPNMRLKPQE-----GMIIRTGKRKFAKL 404

Query: 415 HL 416
            L
Sbjct: 405 IL 406


>gi|171920584|ref|ZP_02931845.1| tyrosyl-tRNA synthetase [Ureaplasma urealyticum serovar 13 str.
           ATCC 33698]
 gi|185178779|ref|ZP_02964579.1| tyrosyl-tRNA synthetase [Ureaplasma urealyticum serovar 5 str. ATCC
           27817]
 gi|188024298|ref|ZP_02996986.1| tyrosyl-tRNA synthetase [Ureaplasma urealyticum serovar 7 str. ATCC
           27819]
 gi|188518560|ref|ZP_03004019.1| tyrosyl-tRNA synthetase [Ureaplasma urealyticum serovar 11 str.
           ATCC 33695]
 gi|188524115|ref|ZP_03004191.1| tyrosyl-tRNA synthetase [Ureaplasma urealyticum serovar 12 str.
           ATCC 33696]
 gi|195867737|ref|ZP_03079738.1| tyrosyl-tRNA synthetase [Ureaplasma urealyticum serovar 9 str. ATCC
           33175]
 gi|198273478|ref|ZP_03206014.1| tyrosyl-tRNA synthetase [Ureaplasma urealyticum serovar 4 str. ATCC
           27816]
 gi|209554094|ref|YP_002284539.1| tyrosyl-tRNA synthetase [Ureaplasma urealyticum serovar 10 str.
           ATCC 33699]
 gi|225550430|ref|ZP_03771379.1| tyrosine--tRNA ligase [Ureaplasma urealyticum serovar 2 str. ATCC
           27814]
 gi|225551163|ref|ZP_03772109.1| tyrosine--tRNA ligase [Ureaplasma urealyticum serovar 8 str. ATCC
           27618]
 gi|254765186|sp|B5ZAU9|SYY_UREU1 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|171903290|gb|EDT49579.1| tyrosyl-tRNA synthetase [Ureaplasma urealyticum serovar 13 str.
           ATCC 33698]
 gi|184209395|gb|EDU06438.1| tyrosyl-tRNA synthetase [Ureaplasma urealyticum serovar 5 str. ATCC
           27817]
 gi|188018972|gb|EDU57012.1| tyrosyl-tRNA synthetase [Ureaplasma urealyticum serovar 7 str. ATCC
           27819]
 gi|188997951|gb|EDU67048.1| tyrosyl-tRNA synthetase [Ureaplasma urealyticum serovar 11 str.
           ATCC 33695]
 gi|195660015|gb|EDX53395.1| tyrosyl-tRNA synthetase [Ureaplasma urealyticum serovar 12 str.
           ATCC 33696]
 gi|195660592|gb|EDX53848.1| tyrosyl-tRNA synthetase [Ureaplasma urealyticum serovar 9 str. ATCC
           33175]
 gi|198249998|gb|EDY74778.1| tyrosyl-tRNA synthetase [Ureaplasma urealyticum serovar 4 str. ATCC
           27816]
 gi|209541595|gb|ACI59824.1| tyrosyl-tRNA synthetase [Ureaplasma urealyticum serovar 10 str.
           ATCC 33699]
 gi|225378978|gb|EEH01343.1| tyrosine--tRNA ligase [Ureaplasma urealyticum serovar 8 str. ATCC
           27618]
 gi|225379584|gb|EEH01946.1| tyrosine--tRNA ligase [Ureaplasma urealyticum serovar 2 str. ATCC
           27814]
          Length = 415

 Score =  386 bits (993), Expect = e-105,   Method: Composition-based stats.
 Identities = 126/422 (29%), Positives = 222/422 (52%), Gaps = 28/422 (6%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  R  I+ I+N  +L    ++     Y+G+D +A SLH G+   +MLL   +  
Sbjct: 3   NLIKDLKARNLINNITNEEKLKKALAENK-GIYVGFDPSADSLHLGNYIMIMLLKRFRLH 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
             K  +L+GG T +IGDPS +   R ++    ++ NI KIK     F       T++ ++
Sbjct: 62  NIKTFALVGGATGMIGDPSGKSAERNLLDKTILEHNITKIKYQLEKF-------TNSQVI 114

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  +  ++ ++D LR++G   ++N +L  E + SRL  +  +S+ EF+Y +LQ YDF++
Sbjct: 115 NNYDFYKNMTFLDFLRDVGKLININYLLEKEIISSRL--DVGISYTEFSYNLLQGYDFLQ 172

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK--LFALTSPLLTTASGTKMGKTLSGA 244
           L KN +  +Q GGSDQWGNI  GI++  +          LT  LLT + G K GK+  GA
Sbjct: 173 LYKNDNIAIQAGGSDQWGNITTGIEIIRKSLGDDNIACGLTINLLTNSEGKKFGKSEKGA 232

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKII 302
           I+L++  +S Y  +Q+  N  DADV      LT + + EI+++ +   +      A+K +
Sbjct: 233 IYLDENKSSVYEMYQFLINQTDADVEKLLNFLTLIDVDEINKIMQAHKENPALRIAQKAL 292

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGL 352
           A  +   VHG+++ E+A   +   F+ +I+           + +PT  + KDE    + +
Sbjct: 293 AQAVVVDVHGQQKYEQALHISQVLFNGNINELNQEEFNIAIKSLPTTKLDKDE----IKI 348

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           + L+  A  ++S   AR  L + +I +N+  +++E   +K QD  +     +  GK+N+ 
Sbjct: 349 IDLLNLANISSSNRVARDFLSTGSILVNDIKVNDENFLVKKQDAINQEFSIIKKGKRNYF 408

Query: 413 IC 414
           + 
Sbjct: 409 LI 410


>gi|212636577|ref|YP_002313102.1| tyrosyl-tRNA synthetase [Shewanella piezotolerans WP3]
 gi|212558061|gb|ACJ30515.1| Tyrosyl-tRNA synthetase, class Ib [Shewanella piezotolerans WP3]
          Length = 398

 Score =  386 bits (993), Expect = e-105,   Method: Composition-based stats.
 Identities = 97/419 (23%), Positives = 179/419 (42%), Gaps = 25/419 (5%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M   +     I  +RG    +     L+ L     +   +G D TA  +H GH   L  +
Sbjct: 1   MADLEQALAEI--KRGTDEILLEADLLEKLKEGRPLKIKLGADPTAPDIHLGHTVILNKM 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+ I L+G  T ++GDPS ++ +R  +  +++  N E  K      +     +
Sbjct: 59  RTFQELGHEVIFLIGDFTGMVGDPSGKNSTRPPLTREQVLANAETYKEQVFKILDPAKTR 118

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N +WL  +    ++R + S  +V RM+  +  + R    Q+++  EF Y +LQ
Sbjct: 119 ----IEFNSSWLEPLGAAGMIR-LASQQTVARMMERDDFKKRYGSGQAIAIHEFMYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGK 239
            YD V L  +    +++GG+DQ  N++ G +L +         +  PLL    G  KM K
Sbjct: 174 GYDSVALESD----VELGGTDQKFNLLMGRELQKSSGQKPQTVIMMPLLEGLDGVKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINE 297
           +    I +++        +    +I D  +  + + L+  P++EI++       G    +
Sbjct: 230 SAHNYIGVSEPAG---EMFGKIMSISDELMWRYFELLSFRPLAEIEQFKADIEAGANPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K  +A EI    H    A+ A    +  F        +  + I+  E   G+ +  L+ 
Sbjct: 287 VKIALAKEIIARFHDEAAADAAHQEFINRFQKGALPSDIQELEIAAGE---GIAIANLLK 343

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +AG  +ST++A R +K  A KI+ + I + ++Q+               GK+      L
Sbjct: 344 EAGLVSSTSDAMRMIKQGAAKIDGNKIEDTRMQLTA-----GTTGVFQVGKRKFAKITL 397


>gi|258512087|ref|YP_003185521.1| tyrosyl-tRNA synthetase [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
 gi|257478813|gb|ACV59132.1| tyrosyl-tRNA synthetase [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
          Length = 413

 Score =  386 bits (993), Expect = e-105,   Method: Composition-based stats.
 Identities = 101/410 (24%), Positives = 180/410 (43%), Gaps = 31/410 (7%)

Query: 15  RGFIHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
           RG   +I    EL     +       +   +G D T+S +H GH   L  L   Q  GH+
Sbjct: 24  RGT-AEIVPEDELVQKLRESVRTGRPLRVKLGIDPTSSDIHLGHTVVLHKLRQFQDLGHQ 82

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
              ++G  T  IGDP+ + E+R+ + ++E+ EN +         +          ++ N 
Sbjct: 83  VFLVIGSFTGQIGDPTDKAETRKQLSAEEVAENAKTYVAQLYKILD----PEKTQVVYNG 138

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
            WL  + +  ++R + S  +V RML  E  + R +  + +   EF Y ++QAYD V L  
Sbjct: 139 DWLAPLDFAQVIR-LASTITVARMLEREDFQKRFQDNRPIHVHEFFYPLMQAYDSVHLRA 197

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLN 248
           +    +++GG+DQ  N++ G  L      P   A+  PLL    G  KM K+L   I +N
Sbjct: 198 D----VELGGTDQKFNLLMGRHLQREFGQPMQVAVMLPLLEGLDGVNKMSKSLGNYIGVN 253

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAKKIIATE 305
           +E   P N +    ++ D+ +  + + L+  P  EI+ M +          +AK  +A E
Sbjct: 254 EE---PNNMFGKLMSVPDSLLFKYYELLSLRPQDEIEAMRREVEAGRMNPRDAKMQLAEE 310

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           +     G E   +A       F        +P   ++         ++  +V  G A S 
Sbjct: 311 LVERFLGPEARREAVEHWRTVFQKGGLPDDIPERRVA----GEAQWIVKWLVDLGLAQSN 366

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           ++ARR ++  A+++N + +++  +Q + QD D      L  GK+  +   
Sbjct: 367 SDARRAIQEGAVRLNGNKVTDMDVQYRPQDGD-----VLQRGKRQFVRLR 411


>gi|254374400|ref|ZP_04989882.1| tyrosyl-tRNA synthetase [Francisella novicida GA99-3548]
 gi|151572120|gb|EDN37774.1| tyrosyl-tRNA synthetase [Francisella novicida GA99-3548]
          Length = 396

 Score =  386 bits (993), Expect = e-105,   Method: Composition-based stats.
 Identities = 96/417 (23%), Positives = 179/417 (42%), Gaps = 27/417 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M + K      + +RG    +     +  L     +    G D TA  +H GH   +  L
Sbjct: 1   MSSIKETL--EIIKRGADEVLIEEELIKKLQKNKPLIIKFGCDPTAPDIHLGHTVVINKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             LQ  GH+   L+G  T+ IGDP+ ++ +R  + ++E+  N E         +     K
Sbjct: 59  KQLQDLGHEIHFLIGDFTAQIGDPTGKNATRPPLTAEEVAANAETYTKQVFKILD----K 114

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
              ++  N  W   +   ++++ + S  +V RML  +    R K  QS+S  EF Y ++Q
Sbjct: 115 DKTVIRRNGDWFNKMSASEMIK-LASKSTVARMLERDDFSKRYKGGQSISIHEFLYPLVQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGK 239
            YD V +  +    +++GG+DQ  N++ G +L ++        +T PLL    G  KM K
Sbjct: 174 GYDSVAMNAD----IELGGTDQKFNLLMGRELQKQQGQEPQVIITMPLLEGLDGVKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINE 297
           +    I + +        +    +I D  +  + + L+   +  I ++ +    G    +
Sbjct: 230 SSQNYIGIEEPAN---EIFGKIMSISDELMWRYYELLSFKSLENIAKLKQDVAAGANPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K  +A E+    H + +AE A    ++ F  +          I+  E+++ + +  L+ 
Sbjct: 287 IKIELAKELIERFHSKGDAESAHQDFIQRFQKNQIPDD-----INVVELNQELPIANLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +AG   ST+EA R ++  A+KI+   +S+ K+      F    N     GK+     
Sbjct: 342 EAGLVASTSEANRMIQQGAVKIDGEKLSDGKII-----FAKGTNNVFQVGKRKFAKI 393


>gi|195586539|ref|XP_002083031.1| GD24918 [Drosophila simulans]
 gi|194195040|gb|EDX08616.1| GD24918 [Drosophila simulans]
          Length = 463

 Score =  386 bits (992), Expect = e-105,   Method: Composition-based stats.
 Identities = 124/438 (28%), Positives = 214/438 (48%), Gaps = 28/438 (6%)

Query: 5   KSDFLSILSERGFIHQISNPRE---LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
           + + L  L++RGF   I        +  L + G  + Y G+D TA SLH G+L  +M L 
Sbjct: 25  QKNLLE-LTDRGFFQGIFPDTAAPRMKQLFTSGRQSIYAGFDPTADSLHVGNLLVIMGLI 83

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFI------- 114
             Q+ GH+PI+L+GG T +IGDPS R   R  +    I+ N++ I+              
Sbjct: 84  HCQRAGHRPIALVGGATGLIGDPSGRKTERNQLGETVIETNLKAIEQQLRQVFENHENCL 143

Query: 115 ----KYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLS 170
               K        +++NN  W   ++ ID +  +G  F +  MLS  SV+SR++ E  +S
Sbjct: 144 WDSKKQKFPLAPLIIVNNADWYADLQLIDFVANMGRHFRMGSMLSRSSVQSRMESEDGMS 203

Query: 171 FLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLL 229
           F EF Y I QAYD++ L + ++C  QMGGSDQ GN++ G +L  R++   ++F LT PL+
Sbjct: 204 FTEFTYQIFQAYDWLHLLRRHNCCFQMGGSDQTGNLMTGHELISRVERKREVFGLTLPLV 263

Query: 230 TTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK 289
           TT  G K GK+   A+WL+   TSP+  +Q++  + D++V    K  T +P+ +++++ +
Sbjct: 264 TTEEGDKFGKSAGNAVWLDCNKTSPFALYQFFLRMPDSEVEKLLKLFTFIPLPQVEQLMR 323

Query: 290 LQGKEI--NEAKKIIATEITTMVHGREEAEKAATAAMECFDM---SIHSQHMPTI----- 339
              +E    +A+ ++A ++T +VHG    ++A       +      +   ++P I     
Sbjct: 324 EHTREPEKRKAQTLLAEDVTLLVHGESGLKQAERVTNALYKGNVEGLAQLNLPEIQQTFQ 383

Query: 340 --SISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
             ++       GM +L L +KA    +  +A R + +    +N   + N    +      
Sbjct: 384 GATMVNLLTEPGMSILELAMKAKCFPTETDAVRIINAGGFYVNQKRVQNIAEVLTTGVHI 443

Query: 398 STGNIKLSFGKKNHIICH 415
                  + G+    I  
Sbjct: 444 CATEFSAARGQTQLYIVR 461


>gi|310642771|ref|YP_003947529.1| tyrosyl-tRNA synthetase [Paenibacillus polymyxa SC2]
 gi|309247721|gb|ADO57288.1| Tyrosyl-tRNA synthetase [Paenibacillus polymyxa SC2]
          Length = 417

 Score =  386 bits (992), Expect = e-105,   Method: Composition-based stats.
 Identities = 98/412 (23%), Positives = 180/412 (43%), Gaps = 28/412 (6%)

Query: 15  RGFIHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
           RG + +I    EL     +       +   +G D +A  +H GH   +  L   Q+ GH+
Sbjct: 23  RG-VAEIVPEDELKRKVVKSVVSGEPLKIKLGLDPSAPDIHIGHTVVMHKLRQFQELGHQ 81

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
              ++G  T  IGDP+ + E+R+ +  +++Q N +  K      +     K    +  N 
Sbjct: 82  VQLIIGDFTGRIGDPTGKSETRKQLTEEDVQRNAQTYKEQIFKILDPEKTK----VYYNS 137

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
            WL  + + D++  + +  +V RML  +    R +    +S  EF Y ++Q  D V L  
Sbjct: 138 EWLGPMSFADVV-TLSAKVTVARMLERDDFTKRYQNGLPISIHEFFYPLMQGMDSVALQS 196

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLN 248
           +    +++GG+DQ  N++ G  L +         +T PLL    G  KM K+L   I ++
Sbjct: 197 D----IELGGTDQKFNLLMGRTLQKEYGVEPQATITLPLLEGLDGVQKMSKSLGNYIGVD 252

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKIIATE 305
           +E   P   +    ++ D  ++ + +  T +   E+  +A   K       +AK  +A  
Sbjct: 253 EE---PNEIYGKSMSVPDELMLKYFELATDITNEELAELAKGVKEGSVHPRDAKMKLAGT 309

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSR-GMGLLTLIVKAGFATS 364
           +  M HG E AE A    +  F        +   +++ D++   G+ ++ L+   GFA S
Sbjct: 310 LVRMYHGEEAAEAAKQHFVTVFQQRALPDDIEEFTLTADQLEEGGIRVIQLLTHLGFAAS 369

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             EA+R ++  ++KIN    ++     K Q+ D      +  GK+      L
Sbjct: 370 NGEAKRSIQQGSVKINEEKWTDVNEAYKPQEGD-----IVQVGKRKFAKIKL 416


>gi|289207590|ref|YP_003459656.1| tyrosyl-tRNA synthetase [Thioalkalivibrio sp. K90mix]
 gi|288943221|gb|ADC70920.1| tyrosyl-tRNA synthetase [Thioalkalivibrio sp. K90mix]
          Length = 401

 Score =  386 bits (992), Expect = e-105,   Method: Composition-based stats.
 Identities = 96/396 (24%), Positives = 174/396 (43%), Gaps = 24/396 (6%)

Query: 24  PRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIG 82
             +L     +G  +    G+D TA  LH GH   +  L  LQ  GH  I L+G  T  IG
Sbjct: 20  EEDLRERLKEGRPLRIKAGFDPTAPDLHLGHTVLINKLRQLQDLGHHIIFLIGDFTGRIG 79

Query: 83  DPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLR 142
           DPS ++ +R  + S++I+ N    +      +     +    +  N TW+  +    ++ 
Sbjct: 80  DPSGKNATRPPLSSEDIERNAATYRDQVFRILDPDRTE----VAFNSTWMEPLGAAGMV- 134

Query: 143 EIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQ 202
           ++ S  +V RML  +    R +  Q ++  EF Y ++Q YD V L  +    +++GG+DQ
Sbjct: 135 QLASRHTVARMLERDDFHKRYRDHQPIAIHEFLYPLIQGYDSVALKAD----VELGGTDQ 190

Query: 203 WGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYW 261
             N++ G +L ++   P    LT P+L    G  KM K+L   I +     +P + +   
Sbjct: 191 KFNLLVGRELQKQEGMPPQVILTMPILEGLDGVQKMSKSLGNYIAV---QDAPDDMFGKL 247

Query: 262 RNIDDADVVSFAKRLTTLPM---SEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEK 318
            +I D  +  + + L+  PM       R A+   +   + K  +  E+    HG    E+
Sbjct: 248 MSISDELMWRYYELLSLRPMGEVRAARRAAEAGERNPRDIKFELGRELVDRFHGPGRGEQ 307

Query: 319 AATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIK 378
           A  A +E F      + +P ++++    + G+ L   +  AG   ST+E R  ++  A++
Sbjct: 308 AQAAFVERFQKHALPEELPEVTVAVP--AEGLLLPNALKSAGLVASTSEGRSMIRQGAVR 365

Query: 379 INNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +N   I +    I+         + +  GK+     
Sbjct: 366 LNGERIEDPGTLIEP-----GEPVVIQVGKRRVARV 396


>gi|261856719|ref|YP_003264002.1| tyrosyl-tRNA synthetase [Halothiobacillus neapolitanus c2]
 gi|261837188|gb|ACX96955.1| tyrosyl-tRNA synthetase [Halothiobacillus neapolitanus c2]
          Length = 402

 Score =  386 bits (992), Expect = e-105,   Method: Composition-based stats.
 Identities = 100/412 (24%), Positives = 183/412 (44%), Gaps = 27/412 (6%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L  +  RG    +     ++ L S   +    G+D TA  LH GH   +  L   Q+ GH
Sbjct: 9   LEEIR-RGAEEILLEQDLVERLKSGRTLRIKAGFDPTAPDLHLGHTVLINKLRQFQQMGH 67

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
             + L+G  T +IGDP+ +  +R  +  +++QEN +  +      +     +    ++ N
Sbjct: 68  HILFLIGDFTGMIGDPTGKSATRPTLTREQVQENAKTYQRQIFKILDPDKTE----IVFN 123

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
            TW+ ++   DL+ E+ S  +V RML  +    R    Q ++  EF Y ++Q YD V L 
Sbjct: 124 STWMGAMTAADLI-ELASRQTVARMLERDDFSKRYTGHQPIAIHEFLYPLVQGYDSVALK 182

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWL 247
            +    +++GG+DQ  N++ G +L ++   P+   +T PLL    G  KM K+L   I +
Sbjct: 183 AD----VELGGTDQKFNLLMGRELQKQYGQPQQTVITMPLLEGLDGVQKMSKSLGNYIGI 238

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATE 305
            +    P   +     I D  +  +   L+  P+ EI   R     G+   + K  +A E
Sbjct: 239 EE---VPDEQFGKLMKISDELMWRYFDLLSFRPLVEIKKLRAEMQAGRNPRDIKFELAME 295

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           I    HG     +A    +  F  S     +P   +       G+G+   + + G   ST
Sbjct: 296 IVDRFHGVGSGAEARERFIARFAKSEIPDDLPEHDLPA-----GLGVAQALKEIGMVAST 350

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           +EA RH+K+ A+++   ++ ++   ++  +F       +  GK+     ++ 
Sbjct: 351 SEAFRHMKAGAVRLGGEVVDDKGAVLEAGEF------IIQVGKRRIAKINVT 396


>gi|220903632|ref|YP_002478944.1| tyrosyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
 gi|219867931|gb|ACL48266.1| tyrosyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
          Length = 398

 Score =  386 bits (992), Expect = e-105,   Method: Composition-based stats.
 Identities = 100/408 (24%), Positives = 171/408 (41%), Gaps = 27/408 (6%)

Query: 15  RGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG + ++ +  EL     +G  +   +G+D TA  LH GH   +  +   Q+ GH  + L
Sbjct: 13  RG-VAELIDENELRKKILRGAPLRIKVGFDPTAPDLHLGHTVVMHKMRHFQELGHHVVFL 71

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
           +G  T  IGDPS R E+R  +  +++  N E  K      +     +    +  N  WL 
Sbjct: 72  IGDFTGRIGDPSGRSETRPPLTEEQVLANAETYKKQVFKILDPAKTE----VAFNSAWLG 127

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDC 193
            +     ++ + S ++V RM+  +    R + ++ +S  EF Y + Q YD V L  +   
Sbjct: 128 KLDATGFIK-LASSYTVARMMERDDFEKRFREQRPISIHEFLYPLCQGYDSVCLKTD--- 183

Query: 194 RLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMT 252
            ++MGG+DQ  N++ G +L           LT PLL    G  KM K+    I +++   
Sbjct: 184 -VEMGGTDQKFNLLVGRNLQAHYGIESQCILTMPLLEGTDGVRKMSKSYGNYIGIDE--- 239

Query: 253 SPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAKKIIATEITTM 309
           +P   +     I D  +  + + L+T  + +I  +             AK+ +A E+ + 
Sbjct: 240 APSEIFGKIMAISDDLMWRYYELLSTKSLEDIATLKTDVATGTVHPKAAKETLAHEMVSR 299

Query: 310 VHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEAR 369
            H R++A++A       F        MP    +  E S     L     AG   S  EA+
Sbjct: 300 YHSRKDADEAQQGFNAVFADGGVPDEMPEHQCAHGEDSTPPVFLE---AAGLVKSRGEAK 356

Query: 370 RHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           R +K  A+ I+     +    I      S G   +  GKK  +   + 
Sbjct: 357 RLMKEGALSIDGQRCDDA---ITP---LSAGEYVIKLGKKRFLKLLVS 398


>gi|321263242|ref|XP_003196339.1| tyrosine-tRNA ligase [Cryptococcus gattii WM276]
 gi|317462815|gb|ADV24552.1| tyrosine-tRNA ligase, putative [Cryptococcus gattii WM276]
          Length = 478

 Score =  386 bits (991), Expect = e-105,   Method: Composition-based stats.
 Identities = 149/457 (32%), Positives = 228/457 (49%), Gaps = 46/457 (10%)

Query: 3   AFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
           A K+  L  L ERGF+  I++  +L    +    T Y G D +ASSLH G+L  L+ L  
Sbjct: 24  APKTTVLQELDERGFVAAITS-DKLKQHVTS-PTTIYAGVDPSASSLHVGNLLPLLGLLH 81

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG----- 117
            Q  GH+ I L+GG T  IGDPS R   R+ +   E++ NI  I      F   G     
Sbjct: 82  FQAHGHQSICLIGGATGSIGDPSGRSTERKSLTPSELRLNIAGITSQVHRFFIRGQEYLS 141

Query: 118 -----------TGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE 166
                       G     ++NN  W+  +  +D LR  G    V+ MLS +SV++RL  +
Sbjct: 142 KRGVDLAAMRKDGGRGVKVMNNYEWMRDVSLLDFLRTTGKMARVSTMLSRDSVKNRLNSD 201

Query: 167 QSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK------ 220
             +S+ EF Y +LQAYDF  L   + C +Q+GGSDQWGNI+ GIDL  R K  +      
Sbjct: 202 SGISYTEFTYQLLQAYDFSHLHSEHGCNIQLGGSDQWGNIVAGIDLIRRGKIAEREEKGE 261

Query: 221 --------LFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSF 272
                   ++ LT PLLTT++G K GK+   A+WL+ + TS   F+Q++    D DV  +
Sbjct: 262 QVKDEEGDVYGLTIPLLTTSTGEKFGKSAGNAVWLDDKRTSAAEFYQFFLRTTDEDVEKY 321

Query: 273 AKRLTTLPMSEIDRMAKLQG--KEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMS 330
            K  T LP+S I  + +     K     +K++A E+T +VHG     +A TAA   +  S
Sbjct: 322 LKLFTFLPLSRIQDVMQAHQTSKTERLPQKLLAAEVTELVHGPAALSRALTAAQVLYSTS 381

Query: 331 IHS-----------QHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKI 379
           I S             M    + K++++  MG+  + V  G   S  E++R ++S+A+++
Sbjct: 382 ISSLTAEKVLDAFRGDMRFHRVKKEDLAE-MGVGKVTVTYGLCGSVGESQRLVQSSALQV 440

Query: 380 NNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           N+  I + + +I ++D        +  G K  II ++
Sbjct: 441 NDRKIGDHREKIVVEDLVDGHIAIVRAGNKRQIILYV 477


>gi|127511955|ref|YP_001093152.1| tyrosyl-tRNA synthetase [Shewanella loihica PV-4]
 gi|126637250|gb|ABO22893.1| tyrosyl-tRNA synthetase [Shewanella loihica PV-4]
          Length = 398

 Score =  386 bits (991), Expect = e-105,   Method: Composition-based stats.
 Identities = 99/417 (23%), Positives = 178/417 (42%), Gaps = 25/417 (5%)

Query: 6   SDFLSILSE--RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           ++    L+E  RG    +     L+ L     +   +G D TA  +H GH   L  +   
Sbjct: 2   ANLDQALAEIKRGTDEILLESDLLEKLKEGRPLRIKLGADPTAPDIHLGHTVILNKMRAF 61

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q+ GH+ I L+G  T ++GDPS ++ +R  +  +++  N E  K      +     +   
Sbjct: 62  QELGHEVIFLIGDFTGMVGDPSGKNSTRPPLTREQVLANAETYKEQVYKILDPAKTR--- 118

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            +  N +WL  +    ++R + S  +V RM+  +  + R    QS++  EF Y +LQ YD
Sbjct: 119 -IEFNSSWLEELGAAGMIR-LASQQTVARMMERDDFKKRYASGQSIAIHEFMYPLLQGYD 176

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLS 242
            V L    +  +++GG+DQ  N++ G +L +         +  PLL    G  KM K+ +
Sbjct: 177 SVAL----EADVELGGTDQKFNLLMGRELQKAAGQKPQAVIMMPLLEGLDGVKKMSKSAN 232

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKK 300
             I +++        +    +I D  +  + + L+  P+ EI ++      G    + K 
Sbjct: 233 NYIGVSEPAG---EMFGKIMSISDDLMWRYFELLSFRPLEEIAQLKSDVDNGTNPRDVKI 289

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
            +A EI    H    AE A    +  F        +  I I+  +   G+G+  ++  AG
Sbjct: 290 ALAKEIIARFHDEAAAEAAHQEFINRFQKGAIPDDIQEIEIAAGD---GIGIANVLKDAG 346

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
             +ST+EA R +K  A K++   I + +L +               GK+      L 
Sbjct: 347 LVSSTSEAMRMIKQGAAKLDGDKIEDSRLVLNA-----GMTGVFQVGKRKFAKITLV 398


>gi|157374243|ref|YP_001472843.1| tyrosyl-tRNA synthetase [Shewanella sediminis HAW-EB3]
 gi|157316617|gb|ABV35715.1| Tyrosine--tRNA ligase [Shewanella sediminis HAW-EB3]
          Length = 398

 Score =  386 bits (991), Expect = e-105,   Method: Composition-based stats.
 Identities = 100/417 (23%), Positives = 178/417 (42%), Gaps = 25/417 (5%)

Query: 6   SDFLSILSE--RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           +D    L+E  RG    +     L+ L     +   +G D TA  +H GH   L  +   
Sbjct: 2   ADLDQALAEIKRGTDEILLEADLLEKLKEGRPLRIKLGADPTAPDIHLGHTVILNKMRTF 61

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q+ GH+ I L+G  T ++GDPS ++ +R  +  +++  N E  K      +     +   
Sbjct: 62  QELGHEVIFLIGDFTGMVGDPSGKNSTRPPLTREQVLANAETYKQQVYKILDPAKTR--- 118

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            +  N +WL  +    ++R + S  +V RM+  +  + R    QS++  EF Y +LQ YD
Sbjct: 119 -IEFNSSWLEPLGAAGMIR-LASKQTVARMMERDDFKKRYGSGQSIAIHEFMYPLLQGYD 176

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLS 242
            V L  +    +++GG+DQ  N++ G +L +         +  PLL    G  KM K+  
Sbjct: 177 SVALKSD----VELGGTDQKFNLLMGRELQKSEGQKPQTVIMMPLLEGLDGVKKMSKSAH 232

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKK 300
             I +++        +    +I D  +  + + L+  P+ EI++       G    + K 
Sbjct: 233 NYIGVSEPAG---EMFGKIMSISDELMWRYFELLSFRPLGEIEQFKADVDAGANPRDIKI 289

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
            +A EI    H    A+ A    +  F        +  + I+  E   G+ +  L+ +AG
Sbjct: 290 ALAKEIIARFHDEAAADAAHQEFINRFQKGAIPTDIQELEIAAGE---GIAIANLLKEAG 346

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
              ST++A R +K  A KI+ + I + +LQ+               GK+      L 
Sbjct: 347 LVNSTSDAMRMIKQGAAKIDGTKIEDTRLQLSA-----GTTGVFQVGKRKFAKITLV 398


>gi|163751948|ref|ZP_02159160.1| tyrosyl-tRNA synthetase [Shewanella benthica KT99]
 gi|161328164|gb|EDP99330.1| tyrosyl-tRNA synthetase [Shewanella benthica KT99]
          Length = 398

 Score =  386 bits (991), Expect = e-105,   Method: Composition-based stats.
 Identities = 94/387 (24%), Positives = 169/387 (43%), Gaps = 23/387 (5%)

Query: 34  GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRM 93
             +   +G D TA  +H GH   L  +   Q+ GH  I L+G  T ++GDPS ++ +R  
Sbjct: 32  RPLRIKLGADPTAPDIHLGHTVILNKMRTFQELGHDVIFLIGDFTGMVGDPSGKNSTRPP 91

Query: 94  MRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRM 153
           +  +++  N E  K      +     +    ++ N TWL  +    ++R + S  +V RM
Sbjct: 92  LTREQVLANAETYKQQVYKILDPAKTR----IVFNSTWLEPLGAAGMIR-LASKQTVARM 146

Query: 154 LSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLG 213
           +  +  + R    QS++  EF Y +LQ YD V L    +  +++GG+DQ  N++ G +L 
Sbjct: 147 MERDDFKKRYASGQSIAIHEFMYPLLQGYDSVAL----EADVELGGTDQKFNLLMGRELQ 202

Query: 214 ERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSF 272
           +         +  PLL    G  KM K+ +  I +++        +    +I D  +  +
Sbjct: 203 KSEGQKPQTVIMMPLLEGLDGVKKMSKSANNYIGVSEPAG---EMFGKIMSISDVLMWRY 259

Query: 273 AKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMS 330
            + L+  P++EI++       G    + K  +A EI    H    A+ A    +  F   
Sbjct: 260 FELLSFRPLAEIEQFKADIEAGANPRDIKIALAKEIIARFHDEAAADAAHQEFINRFQKG 319

Query: 331 IHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQ 390
                +  + +S   V  G+ +  L+ + GF  ST++A R +K  A KI+   I + +LQ
Sbjct: 320 AIPDDIEEVELS---VGDGIAIANLLKELGFVKSTSDAMRMIKQGAAKIDGVKIKDTRLQ 376

Query: 391 IKLQDFDSTGNIKLSFGKKNHIICHLC 417
           +         +     GK+      L 
Sbjct: 377 LTA-----GTSGIFQVGKRKFAKVTLV 398


>gi|217967872|ref|YP_002353378.1| tyrosyl-tRNA synthetase [Dictyoglomus turgidum DSM 6724]
 gi|217336971|gb|ACK42764.1| tyrosyl-tRNA synthetase [Dictyoglomus turgidum DSM 6724]
          Length = 404

 Score =  385 bits (990), Expect = e-105,   Method: Composition-based stats.
 Identities = 104/417 (24%), Positives = 182/417 (43%), Gaps = 32/417 (7%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFW 62
            KS+ + I+ E G         +L     +G  +   +G D +A  LH GH   L  L  
Sbjct: 13  LKSNVVEIIPEDGLY------EKLKKAREEGRPLRVKLGADPSAPDLHLGHAVVLRKLKQ 66

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD 122
            Q  GH+ + ++G  T+ IGDPS R E+R+ +   +++ N    +      +      T 
Sbjct: 67  FQDLGHQVVFIIGDFTARIGDPSGRSETRKPLTPDQVKRNALTYQEQVGKILDV----TK 122

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
           A +   E W   +K  D+L  + S +++ RML  +    R K ++ +   E  Y +LQAY
Sbjct: 123 AEIRYQEEWFGKMKLEDVL-VLTSKYTIARMLERDDFAQRFKEQKPIFIHEIMYPLLQAY 181

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTL 241
           D V +  +    +++GG+DQ  N+I G ++          A+  P+L    G  KM K+L
Sbjct: 182 DSVAIKAD----IELGGTDQKFNLIVGREIQREYGLEPQVAMLMPILEGLDGKQKMSKSL 237

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEA 298
              I L +    P   +    +I D  ++ + +  T L   EI ++ +   +      +A
Sbjct: 238 GNYIGLTE---PPNEMYGKVMSIPDELIIRYYELATELTKEEIRKIEQEMKEGKLNPRDA 294

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVK 358
           K  +A EI  + HG E + KA       F      +++P + IS       + ++ L+ +
Sbjct: 295 KARLAREIVKIYHGEEASLKAEEEFNRIFRNKELPENVPEVEIS----EPKIWVVKLLTQ 350

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            G A S +EA+R +   A++I+ + I +  L I +          L  GK       
Sbjct: 351 VGAAKSNSEAKRLISQGAVEIDGTRIEDINLDITI-----DKPFILRVGKHFFRRIK 402


>gi|66815010|ref|XP_641614.1| tyrosine-tRNA ligase [Dictyostelium discoideum AX4]
 gi|74897218|sp|Q54WD9|SYYM_DICDI RecName: Full=Probable tyrosyl-tRNA synthetase, mitochondrial;
           AltName: Full=Tyrosine--tRNA ligase; Short=TyrRS; Flags:
           Precursor
 gi|60469643|gb|EAL67632.1| tyrosine-tRNA ligase [Dictyostelium discoideum AX4]
          Length = 482

 Score =  385 bits (990), Expect = e-105,   Method: Composition-based stats.
 Identities = 138/452 (30%), Positives = 226/452 (50%), Gaps = 46/452 (10%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQ---------------GVVTAYIGYDLTASSL 49
           K++ ++IL +RGFIHQ++      I  +                  V+ Y G+D TA SL
Sbjct: 36  KNNVINILKKRGFIHQMTASDIEMIKMTSTNNNNNNDNNNNNNNNKVSLYAGFDPTADSL 95

Query: 50  HAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGI 109
           H G+L  LM++   ++ GH PI+LMGG T++IGDPS +   R M+  + I+ N++ I+  
Sbjct: 96  HIGNLLTLMVMLHFKRHGHNPIALMGGATALIGDPSGKSSDRVMLTEEFIEGNLKHIREN 155

Query: 110 FSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK--REQ 167
            ++ +       D L++NN  W  ++  I  LRE+GS+F V  M+  + +++RL    E 
Sbjct: 156 ITAVL-----GEDTLVVNNIEWNKTMDVISFLREVGSYFRVGSMIKKDFIQNRLSDSNEN 210

Query: 168 SLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSP 227
            +SF EF Y + QA DF  L   + C +Q+GGSDQWGNI  G DL  +        +T P
Sbjct: 211 GISFTEFCYSLFQANDFAHLFLKHGCSIQIGGSDQWGNITAGCDLIRKKLKGNAQGITIP 270

Query: 228 LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID-- 285
           LLT ++G K+GK+   +IWL+   TSPY F+QYW  + D DV    K  T +P+ EI   
Sbjct: 271 LLTNSAGKKLGKSEGNSIWLSPHRTSPYKFYQYWIQVSDEDVERLLKLFTLIPLEEISIL 330

Query: 286 RMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMS--IHSQHMPTISISK 343
                +   +   +K IA  +T ++HG++  E+A       F  S  + + +  T  I  
Sbjct: 331 VQKHNENPHLRLGQKTIAEHVTRLIHGQKGVEEALNTTELLFGESNKLLTPNASTTKIGD 390

Query: 344 DEV-------------------SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSII 384
            ++                   ++   +L L  +     S ++ ++ L+S +I +NN  +
Sbjct: 391 FDIGYLLSRVNFIELERSKFVDNQTEPILNLFAQIS-DASKSKVKQLLQSKSIYLNNIPV 449

Query: 385 SNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           ++    I+  D  +   I L  GKK + +   
Sbjct: 450 ASNSQFIQSSDLIANDFIYLKSGKKIYYLIKF 481


>gi|157960823|ref|YP_001500857.1| tyrosyl-tRNA synthetase [Shewanella pealeana ATCC 700345]
 gi|157845823|gb|ABV86322.1| tyrosyl-tRNA synthetase [Shewanella pealeana ATCC 700345]
          Length = 398

 Score =  385 bits (990), Expect = e-105,   Method: Composition-based stats.
 Identities = 100/420 (23%), Positives = 176/420 (41%), Gaps = 25/420 (5%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M   +     I   RG    +     L+ L     +   +G D TA  +H GH   L  +
Sbjct: 1   MADLEQALAEI--RRGTDEILLEADLLEKLKEGRPLKIKLGADPTAPDIHLGHTVILNKM 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+ I L+G  T ++GDPS ++ +R  +  +++  N E  K      +     +
Sbjct: 59  RTFQELGHEVIFLIGDFTGMVGDPSGKNSTRPPLTREQVLANAETYKQQVYKILDPAKTR 118

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N TWL  +    ++R + S  +V RM+  +  + R    QS++  EF Y +LQ
Sbjct: 119 ----IEFNSTWLEPLGAAGMIR-LASQQTVARMMERDDFKKRYGSGQSIAIHEFMYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGK 239
            YD V L    +  +++GG+DQ  N++ G +L +         +  PLL    G  KM K
Sbjct: 174 GYDSVAL----EADVELGGTDQKFNLLMGRELQKSAGQKPQTVIMMPLLEGLDGVKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINE 297
           +    I +++        +    +I D  +  + + L+  P++E+++       G    +
Sbjct: 230 SAHNYIGVSEPAG---EMFGKIMSISDDLMWRYFELLSFRPLTEVEQFKADVDAGANPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K  +A EI    H    AE A    +  F        +  + I+  E   G+ +  L+ 
Sbjct: 287 VKIALAKEIIARFHDEAAAEAAHQEFINRFQKGAIPSDIEELEIAAGE---GIAIANLLK 343

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           +AG   ST++A R +K  A KI+   I + +LQ+               GK+      L 
Sbjct: 344 EAGLVNSTSDAMRMIKQGAAKIDGDKIEDTRLQLTA-----GTTAVFQVGKRKFAKITLV 398


>gi|195953012|ref|YP_002121302.1| tyrosyl-tRNA synthetase [Hydrogenobaculum sp. Y04AAS1]
 gi|195932624|gb|ACG57324.1| tyrosyl-tRNA synthetase [Hydrogenobaculum sp. Y04AAS1]
          Length = 392

 Score =  385 bits (990), Expect = e-105,   Method: Composition-based stats.
 Identities = 110/383 (28%), Positives = 175/383 (45%), Gaps = 24/383 (6%)

Query: 34  GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRM 93
             +    G+D TA  LH GH   L  L   Q  GH+ I L+G  T++IGDP+ R+E+R  
Sbjct: 31  KPLVVKAGFDPTAKDLHLGHTVLLQKLRDFQNLGHEIIFLIGDFTAMIGDPTGRNETRPP 90

Query: 94  MRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRM 153
           +  +E+ EN +  +      +     K    +L N  WL ++   D +  + S ++V RM
Sbjct: 91  LSKEEVLENAKTYQEQVFKILDKDKTK----ILYNSEWLSTMTTKD-IVNLASKYTVARM 145

Query: 154 LSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLG 213
           L  +  + R K    +   EF Y + Q YD V L  +    +++GGSDQ  N++ G +L 
Sbjct: 146 LERDDFQKRYKEGSPIHIHEFLYPLFQGYDSVILKAD----IEIGGSDQKFNLLVGRELQ 201

Query: 214 ERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSF 272
           +     K   +T PLL    G  KM K+    I L      P + +    +I D  +  +
Sbjct: 202 KDYGLEKQVCITMPLLVGIDGVKKMSKSYGNYIAL---KDDPKDMFGKIMSISDELMYDY 258

Query: 273 AKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIH 332
              LT     EI+++  +      EAKK +A  I +  H  E+A++A       F     
Sbjct: 259 YTLLTDKTPDEIEKIKAMH---PMEAKKQLAYIIVSRFHSEEKAKEAKEFFESTFSQKEF 315

Query: 333 SQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
            +  P  S S       +    LIVK GFATS NEARR +    ++IN   I++   +I 
Sbjct: 316 PKDAPVFSFSD---KDSLKAYELIVKIGFATSNNEARRIISGGGLRINGEKITDPNKEIV 372

Query: 393 LQDFDSTGNIKLSFGKKNHIICH 415
           +++      +++  GKK+  I  
Sbjct: 373 VEN-----ELRVQVGKKHFAIIK 390


>gi|225847897|ref|YP_002728060.1| tyrosyl-tRNA synthetase [Sulfurihydrogenibium azorense Az-Fu1]
 gi|225643257|gb|ACN98307.1| tyrosyl-tRNA synthetase [Sulfurihydrogenibium azorense Az-Fu1]
          Length = 403

 Score =  385 bits (989), Expect = e-105,   Method: Composition-based stats.
 Identities = 111/411 (27%), Positives = 184/411 (44%), Gaps = 23/411 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L ++G +  IS    LD L     +    G+D TA  LH GH   L  L   Q+ GH   
Sbjct: 10  LIKKGTLEIISEEELLDKLKEGRPLIVKAGFDPTAPDLHLGHTVLLQKLRTFQQLGHTVY 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            ++G  T++IGDPS RD++R  +  Q++ EN +  K      +         +++ N +W
Sbjct: 70  FIIGDFTAMIGDPSGRDQTRPPLTKQQVLENAKTYKEQVFKVLD----PEKTVVVFNSSW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L  +K  DL++ + + ++V RML  E  + R K    +S  EF Y +LQAYD V +  + 
Sbjct: 126 LGEMKAEDLIK-LTAKYTVARMLEREDFKKRFKENIPISIHEFIYPLLQAYDSVAIKAD- 183

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASGT-KMGKTLSGAIWLNK 249
              +++GGSDQ  N++ G D+ +         A+  PLL    G  KM K+    I + +
Sbjct: 184 ---VELGGSDQRFNLLIGRDIQKEYGIEKPQVAILLPLLVGTDGVKKMSKSYGNYIGITE 240

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAKKIIATEI 306
               P + +    +I D  +  + + LT L + EID+M K          E KK +A  I
Sbjct: 241 ---PPEDMFGKVMSISDELMWQYWELLTDLTVEEIDKMKKDVESGVLHPMEVKKQLAMYI 297

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSR-GMGLLTLIVKAGFATST 365
               H ++ A KA     +          +P I++    +    + L  LI     A S 
Sbjct: 298 VERFHDKDSAIKAKEHFEKVHSKKEIPDDIPVINVKDLNIEDKEIELFELIYLLNLAPSK 357

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            EA+R +K   +KI+   + +   ++ L     T    +  GK+  +   +
Sbjct: 358 AEAKRLIKQGGVKIDGEKVDDFLYKVDL-----TKEHIIQAGKRKFVKLQV 403


>gi|90580612|ref|ZP_01236417.1| tyrosyl-tRNA synthetase [Vibrio angustum S14]
 gi|90438270|gb|EAS63456.1| tyrosyl-tRNA synthetase [Photobacterium angustum S14]
          Length = 395

 Score =  385 bits (989), Expect = e-105,   Method: Composition-based stats.
 Identities = 102/417 (24%), Positives = 174/417 (41%), Gaps = 28/417 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M + +   + I  +RG    I     +  L     +   +G D TA  +H GH   L  L
Sbjct: 1   MASIEQALIEI--KRGVEELIPEAELIAKLKENRPLRIKLGADPTAPDIHLGHTVILNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+   L+G  T ++GDP+ ++ +R  +  +++  N E  K      +      
Sbjct: 59  RTFQELGHEVTFLIGDFTGMVGDPTGKNATRPPLTREDVLRNAETYKEQVFKILDPAKT- 117

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N TWL  +    ++R + S  +V RML  +  + R    + ++  EF Y +LQ
Sbjct: 118 ---TIAFNSTWLSELGAEGMIR-LASNQTVARMLERDDFKKRYGENRPIAIHEFMYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGK 239
            YD V +    +  +++GG+DQ  N++ G +L +         LT PLL    G  KM K
Sbjct: 174 GYDSVAM----ETDVELGGTDQKFNLLMGRELQKSHAQKPQVVLTMPLLVGLDGVKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINE 297
           +    I +     +P + +    +I D  + S+ + L+  PM EI +       GK   +
Sbjct: 230 SAHNYIGV---ADAPSDMFGKIMSISDDLMWSYFELLSFRPMDEIAQFKADVDAGKNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A EI    H  E AE A    +  F        MP       E    + +  L+ 
Sbjct: 287 VKFLLAKEIIARFHSEEAAEAALQEFISRFQKGNLPDEMPEF-----EFEASLPIANLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +A    ST++A R ++  A+K +   + + KL          GN     GK+     
Sbjct: 342 EAALVNSTSDAMRMIRQGAVKQDGEKVEDTKLVPTA------GNYVFQVGKRKFARV 392


>gi|270159220|ref|ZP_06187876.1| tyrosyl-tRNA synthetase [Legionella longbeachae D-4968]
 gi|289165954|ref|YP_003456092.1| tyrosyl-tRNA synthetase [Legionella longbeachae NSW150]
 gi|269987559|gb|EEZ93814.1| tyrosyl-tRNA synthetase [Legionella longbeachae D-4968]
 gi|288859127|emb|CBJ13056.1| tyrosyl-tRNA synthetase [Legionella longbeachae NSW150]
          Length = 398

 Score =  385 bits (989), Expect = e-105,   Method: Composition-based stats.
 Identities = 102/405 (25%), Positives = 178/405 (43%), Gaps = 23/405 (5%)

Query: 15  RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLM 74
           RG    +        L   G +    G+D TA  LH GH   L  L   Q+ GH+ I L+
Sbjct: 13  RGCEEVLPEHDLEKKLQKGGSLKIKAGFDPTAPDLHLGHTVLLNKLRQFQQFGHEVIFLI 72

Query: 75  GGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCS 134
           G  T++IGDP+ ++ +R  +  + + EN +  +      +     +    +  N  WL  
Sbjct: 73  GDFTAMIGDPTGKNVTRLPLSQETVLENAKTYQEQVFKILDPLKTR----VAFNSQWLAQ 128

Query: 135 IKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCR 194
              +DL+R   +  +V RML  +    R    Q ++  EF Y +LQ YD V L  +    
Sbjct: 129 FSAVDLIRLAATH-TVARMLERDDFNKRYISNQPIAIHEFLYPLLQGYDSVALKAD---- 183

Query: 195 LQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTS 253
           +++GGSDQ  N++ G +L +         + +PL+    G  KM K+L   I +N+    
Sbjct: 184 VELGGSDQKFNLLMGRELQKHYGFEPQVVMMTPLIEGLDGVKKMSKSLDNYIGINEPAA- 242

Query: 254 PYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEITTMVH 311
               +    +I D  +  +   L+    +EI   + + LQG    + K   A EI T  H
Sbjct: 243 --EMFGKIMSISDELMWRYINLLSFKTGNEIAALKNSVLQGANPRDIKIEFAKEIVTRFH 300

Query: 312 GREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRH 371
            +++AEKA    +E F   +  + +    ++   +   + L  L+ +A    ST+E+ R 
Sbjct: 301 DQQQAEKAHIDFIERFQKGVIPEDLEEQIVT---LQNSLSLAQLLKQANLTQSTSESMRL 357

Query: 372 LKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +K  A+KI+ + + +  L++ L          +  GK+      L
Sbjct: 358 IKQGAVKIDGNKVEDPGLELAL-----GQTYIIQVGKRRIAKLRL 397


>gi|118497584|ref|YP_898634.1| tyrosyl-tRNA synthetase [Francisella tularensis subsp. novicida
           U112]
 gi|195536282|ref|ZP_03079289.1| tyrosyl-tRNA synthetase [Francisella tularensis subsp. novicida
           FTE]
 gi|118423490|gb|ABK89880.1| tyrosyl-tRNA synthetase [Francisella novicida U112]
 gi|194372759|gb|EDX27470.1| tyrosyl-tRNA synthetase [Francisella tularensis subsp. novicida
           FTE]
          Length = 396

 Score =  385 bits (989), Expect = e-105,   Method: Composition-based stats.
 Identities = 96/417 (23%), Positives = 179/417 (42%), Gaps = 27/417 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M + K      + +RG    +     +  L     +    G D TA  +H GH   +  L
Sbjct: 1   MSSIKETL--EIIKRGADEVLIEEELIKKLQKNKRLIIKFGCDPTAPDIHLGHTVVINKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             LQ  GH+   L+G  T+ IGDP+ ++ +R  + ++E+  N E         +     K
Sbjct: 59  KQLQDLGHEIHFLIGDFTAQIGDPTGKNATRPPLTAEEVAANAETYTKQVFKILD----K 114

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
              ++  N  W   +   ++++ + S  +V RML  +    R K  QS+S  EF Y ++Q
Sbjct: 115 DKTVIRRNGDWFNKMSASEMIK-LASKSTVARMLERDDFSKRYKGGQSISIHEFLYPLVQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGK 239
            YD V +  +    +++GG+DQ  N++ G +L ++        +T PLL    G  KM K
Sbjct: 174 GYDSVAMNAD----IELGGTDQKFNLLMGRELQKQQGQEPQVIITMPLLEGLDGVKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINE 297
           +    I + +        +    +I D  +  + + L+   +  I ++ +    G    +
Sbjct: 230 SSQNYIGIEEPAN---EIFGKIMSISDELMWRYYELLSFKSLENIAKLKQDVAAGANPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K  +A E+    H + +AE A    ++ F  +          I+  E+++ + +  L+ 
Sbjct: 287 IKIELAKELIERFHSKGDAESAHQDFIQRFQKNQIPDD-----INVVELNQELPIANLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +AG   ST+EA R ++  A+KI+   +S+ K+      F    N     GK+     
Sbjct: 342 EAGLVASTSEANRMIQQGAVKIDGEKLSDGKII-----FAKGTNNVFQVGKRKFAKI 393


>gi|15640651|ref|NP_230280.1| tyrosyl-tRNA synthetase [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|121591670|ref|ZP_01678906.1| tyrosyl-tRNA synthetase [Vibrio cholerae 2740-80]
 gi|147673048|ref|YP_001216125.1| tyrosyl-tRNA synthetase [Vibrio cholerae O395]
 gi|153823558|ref|ZP_01976225.1| tyrosyl-tRNA synthetase [Vibrio cholerae B33]
 gi|227080812|ref|YP_002809363.1| tyrosyl-tRNA synthetase [Vibrio cholerae M66-2]
 gi|229505747|ref|ZP_04395257.1| tyrosyl-tRNA synthetase [Vibrio cholerae BX 330286]
 gi|229509220|ref|ZP_04398705.1| tyrosyl-tRNA synthetase [Vibrio cholerae B33]
 gi|229519571|ref|ZP_04409014.1| tyrosyl-tRNA synthetase [Vibrio cholerae RC9]
 gi|229608858|ref|YP_002879506.1| tyrosyl-tRNA synthetase [Vibrio cholerae MJ-1236]
 gi|254850865|ref|ZP_05240215.1| tyrosyl-tRNA synthetase 2 [Vibrio cholerae MO10]
 gi|255744152|ref|ZP_05418105.1| tyrosyl-tRNA synthetase [Vibrio cholera CIRS 101]
 gi|262155726|ref|ZP_06028850.1| tyrosyl-tRNA synthetase [Vibrio cholerae INDRE 91/1]
 gi|262169931|ref|ZP_06037621.1| tyrosyl-tRNA synthetase [Vibrio cholerae RC27]
 gi|297580757|ref|ZP_06942683.1| tyrosyl-tRNA synthetase [Vibrio cholerae RC385]
 gi|298500747|ref|ZP_07010550.1| tyrosyl-tRNA synthetase [Vibrio cholerae MAK 757]
 gi|81545368|sp|Q9KU92|SYY2_VIBCH RecName: Full=Tyrosyl-tRNA synthetase 2; AltName:
           Full=Tyrosine--tRNA ligase 2; Short=TyrRS 2
 gi|9655066|gb|AAF93797.1| tyrosyl-tRNA synthetase [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|121546470|gb|EAX56692.1| tyrosyl-tRNA synthetase [Vibrio cholerae 2740-80]
 gi|126518927|gb|EAZ76150.1| tyrosyl-tRNA synthetase [Vibrio cholerae B33]
 gi|146314931|gb|ABQ19470.1| tyrosyl-tRNA synthetase [Vibrio cholerae O395]
 gi|227008700|gb|ACP04912.1| tyrosyl-tRNA synthetase [Vibrio cholerae M66-2]
 gi|227012456|gb|ACP08666.1| tyrosyl-tRNA synthetase [Vibrio cholerae O395]
 gi|229344260|gb|EEO09235.1| tyrosyl-tRNA synthetase [Vibrio cholerae RC9]
 gi|229353792|gb|EEO18728.1| tyrosyl-tRNA synthetase [Vibrio cholerae B33]
 gi|229357970|gb|EEO22887.1| tyrosyl-tRNA synthetase [Vibrio cholerae BX 330286]
 gi|229371513|gb|ACQ61936.1| tyrosyl-tRNA synthetase [Vibrio cholerae MJ-1236]
 gi|254846570|gb|EET24984.1| tyrosyl-tRNA synthetase 2 [Vibrio cholerae MO10]
 gi|255738092|gb|EET93484.1| tyrosyl-tRNA synthetase [Vibrio cholera CIRS 101]
 gi|262021665|gb|EEY40376.1| tyrosyl-tRNA synthetase [Vibrio cholerae RC27]
 gi|262030437|gb|EEY49077.1| tyrosyl-tRNA synthetase [Vibrio cholerae INDRE 91/1]
 gi|297535173|gb|EFH74008.1| tyrosyl-tRNA synthetase [Vibrio cholerae RC385]
 gi|297540528|gb|EFH76586.1| tyrosyl-tRNA synthetase [Vibrio cholerae MAK 757]
          Length = 395

 Score =  385 bits (989), Expect = e-105,   Method: Composition-based stats.
 Identities = 98/419 (23%), Positives = 176/419 (42%), Gaps = 28/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M + ++    I  +RG    I     +  L     +   +G D TA  +H GH   L  L
Sbjct: 1   MASIEAALAEI--KRGVEELIPEEELIAKLKENRPLRIKLGADPTAPDIHLGHTVILNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GH    L+G  T ++GDP+ ++ +R  +  +++  N E  K      +     K
Sbjct: 59  RTFQDLGHDVTFLIGDFTGMVGDPTGKNTTRPPLTREDVLRNAETYKQQVFKILDPAKTK 118

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N  WL  +    ++R + S  +V RML  +  + R    Q ++  EF Y +LQ
Sbjct: 119 ----IQFNSEWLSKLGAEGMIR-LASNQTVARMLERDDFKKRYNNGQPIAIHEFMYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGK 239
            YD V +    +  +++GG+DQ  N++ G +L +         L  PLL    G  KM K
Sbjct: 174 GYDSVAM----ETDVELGGTDQKFNLLMGRELQKANGQKPQVVLMMPLLVGLDGEKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINE 297
           +    I +++   +P   +    +I D  + S+ + L+  P+ E+ +       G    +
Sbjct: 230 SAHNYIGVSE---APSEMFGKIMSISDDLMWSYYELLSFRPLEEVAQFKAEVANGANPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A EI    H + +A+ A    +  F      + M      + E   G+ +  L+ 
Sbjct: 287 IKILLAKEIIARFHSQADADAAEQEFINRFQKGAMPEEM-----PEFEFESGIAISNLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +AG   ST++A R +K  A+K++   + + KL          G      GK+      +
Sbjct: 342 EAGLVASTSDALRMIKQGAVKLDGEKLEDAKLIPAC------GTSVYQVGKRKFARVTI 394


>gi|332678286|gb|AEE87415.1| Tyrosyl-tRNA synthetase cluster 1 [Francisella cf. novicida Fx1]
          Length = 396

 Score =  385 bits (989), Expect = e-105,   Method: Composition-based stats.
 Identities = 96/414 (23%), Positives = 178/414 (42%), Gaps = 27/414 (6%)

Query: 6   SDFLSILS--ERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           S+    L   +RG    +     +  L     +    G D TA  +H GH   +  L  L
Sbjct: 2   SNIKETLEIIKRGADEVLIEEELIKKLQKNKPLIIKFGCDPTAPDIHLGHTVVINKLKQL 61

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q  GH+   L+G  T+ IGDP+ ++ +R  + ++E+  N E         +     K   
Sbjct: 62  QDLGHEIHFLIGDFTAQIGDPTGKNATRPPLTAEEVAANAETYTKQVFKILD----KDKT 117

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           ++  N  W   +   ++++ + S  +V RML  +    R K  QS+S  EF Y ++Q YD
Sbjct: 118 VIRRNGDWFNKMSASEMIK-LASKSTVARMLERDDFSKRYKGGQSISIHEFLYPLVQGYD 176

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLS 242
            V +  +    +++GG+DQ  N++ G +L ++        +T PLL    G  KM K+  
Sbjct: 177 SVAMNAD----IELGGTDQKFNLLMGRELQKQQGQEPQVIITMPLLEGLDGVKKMSKSSQ 232

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKK 300
             I + +        +    +I D  +  + + L+   +  I ++ +    G    + K 
Sbjct: 233 NYIGIEEPAN---EIFGKIMSISDELMWRYYELLSFKSLENIAKLKQDVAAGANPRDIKI 289

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
            +A E+    H + +AE A    ++ F  +          I+  E+++ + +  L+ +AG
Sbjct: 290 ELAKELIERFHSKGDAEIAHQDFIQRFQKNQIPDD-----INVVELNQELPIANLLKEAG 344

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
              ST+EA R ++  A+KI+   +S+ K+      F    N     GK+     
Sbjct: 345 LVASTSEANRMIQQGAVKIDGEKLSDGKII-----FAKGTNNVFQVGKRKFAKI 393


>gi|146281152|ref|YP_001171305.1| tyrosyl-tRNA synthetase [Pseudomonas stutzeri A1501]
 gi|145569357|gb|ABP78463.1| tyrosyl-tRNA synthetase [Pseudomonas stutzeri A1501]
 gi|327479307|gb|AEA82617.1| tyrosyl-tRNA synthetase [Pseudomonas stutzeri DSM 4166]
          Length = 399

 Score =  385 bits (989), Expect = e-105,   Method: Composition-based stats.
 Identities = 97/405 (23%), Positives = 169/405 (41%), Gaps = 24/405 (5%)

Query: 15  RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLM 74
           RG    +     +  L     +    G+D TA  LH GH   +  +  LQ+ GH+ + L+
Sbjct: 13  RGADEVLVESELVAKLERGEPLRVKAGFDPTAPDLHLGHTVLINKMRQLQELGHQVVFLI 72

Query: 75  GGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCS 134
           G  T +IGDPS +  +R  +   ++ EN E  K      +     +    +  N TW+  
Sbjct: 73  GDFTGMIGDPSGKSATRPPLTRDQVLENAETYKAQVFKILDPARTE----VAFNSTWMDQ 128

Query: 135 IKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCR 194
           +   D +R + S ++V RML  +    R    Q ++  EF Y ++Q YD V L  +    
Sbjct: 129 LSPADFIR-LASQYTVARMLERDDFSKRYSTNQPIAIHEFLYPLVQGYDSVALKAD---- 183

Query: 195 LQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTS 253
           +++GG+DQ  N++ G +L      P    +T PLL    G  KM K+L   + + +   +
Sbjct: 184 IELGGTDQKFNLLMGRELQRAYGQPSQCVVTMPLLEGLDGIKKMSKSLGNYVGIQE---A 240

Query: 254 PYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKKIIATEITTMVH 311
           P   +    +I D+ +  + + L+     EI        +G    + K  +A EI    H
Sbjct: 241 PGVMYSKLVSIPDSLMWRYFELLSFRSEEEIAEFRSDVSRGANPRDIKIKLAEEIVARFH 300

Query: 312 GREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRH 371
           G E A  A  +A          + +P I +      + M + +++ KAG   +   AR  
Sbjct: 301 GDEAAATAHRSAGNRMKDGELPEDLPQIDLVS---EQDMPIASVLNKAGLVKNAAMARDL 357

Query: 372 LKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           L S  ++++   + +     +L             GKK+     L
Sbjct: 358 LGSGGVRVDG-KVVDRDFVFEL-----GATHVCQAGKKSFARVSL 396


>gi|84394556|ref|ZP_00993262.1| tyrosyl-tRNA synthetase [Vibrio splendidus 12B01]
 gi|86148140|ref|ZP_01066439.1| tyrosyl-tRNA synthetase [Vibrio sp. MED222]
 gi|218710458|ref|YP_002418079.1| tyrosyl-tRNA synthetase [Vibrio splendidus LGP32]
 gi|84374825|gb|EAP91766.1| tyrosyl-tRNA synthetase [Vibrio splendidus 12B01]
 gi|85834057|gb|EAQ52216.1| tyrosyl-tRNA synthetase [Vibrio sp. MED222]
 gi|218323477|emb|CAV19654.1| tyrosyl-tRNA synthetase [Vibrio splendidus LGP32]
          Length = 395

 Score =  385 bits (989), Expect = e-105,   Method: Composition-based stats.
 Identities = 100/420 (23%), Positives = 181/420 (43%), Gaps = 30/420 (7%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLML 59
           M + ++    I  +RG + ++    EL     +G  +   +G D TA  +H GH      
Sbjct: 1   MASIEAALAEI--KRG-VEELIPEDELIAKLKEGRPLRIKLGADPTAPDIHLGHTVIFNK 57

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG 119
           L   Q+ GH+   L+G  T+++GDPS ++ +R  +  +++ +N E  K      +     
Sbjct: 58  LRAFQELGHEVTFLIGDFTAMVGDPSGKNSTRPPLSREDVLKNAETYKEQVFKILDPAKT 117

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
           +    +  N  WL  +    ++R + S  +V RML  +  + R    Q ++  EF Y +L
Sbjct: 118 Q----IRFNSEWLSELGAEGMIR-LASNQTVARMLERDDFKKRYAGGQPIAIHEFMYPLL 172

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMG 238
           Q +D V L  +    +++GG+DQ  N++ G +L +         L  PLL    G  KM 
Sbjct: 173 QGHDSVALESD----VELGGTDQKFNLLMGRELQKAAGQKPQAVLMMPLLVGLDGVKKMS 228

Query: 239 KTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEIN 296
           K+    I +++   +P   +    +I D  + S+ + L+  P+ E+  +      GK   
Sbjct: 229 KSAHNYIGISE---APSEMFGKIMSISDDLMWSYYELLSFRPLEEVAELKAGVEAGKNPR 285

Query: 297 EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLI 356
           + K ++A EI    H   +AE A    +  F  +     MP       E   G+ +  ++
Sbjct: 286 DVKVLLAKEIIARFHSEADAEAAEQEFVNRFAKNQVPDEMPEF-----EFEAGLPIANVL 340

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            +AG   ST++A R +K  A K+    I + K   +       G      GK+      +
Sbjct: 341 KEAGLVNSTSDAMRMIKQGAAKLEGEKIEDSKFVPEA------GTAVYQVGKRKFARITI 394


>gi|77359501|ref|YP_339076.1| tyrosyl-tRNA synthetase II [Pseudoalteromonas haloplanktis TAC125]
 gi|115305795|sp|Q3ILJ9|SYY2_PSEHT RecName: Full=Tyrosyl-tRNA synthetase 2; AltName:
           Full=Tyrosine--tRNA ligase 2; Short=TyrRS 2
 gi|76874412|emb|CAI85633.1| Tyrosyl-tRNA synthetase II [Pseudoalteromonas haloplanktis TAC125]
          Length = 399

 Score =  384 bits (988), Expect = e-105,   Method: Composition-based stats.
 Identities = 92/407 (22%), Positives = 181/407 (44%), Gaps = 23/407 (5%)

Query: 15  RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLM 74
           RG    +     ++ L S   +    G+D TA  LH GH   +  +   Q  GH+ + L+
Sbjct: 12  RGTEEILIEDELVEKLKSGKKLKIKAGFDPTAPDLHLGHTVLINKMKTFQDLGHEVVFLI 71

Query: 75  GGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCS 134
           G  T +IGDP+ ++ +R+ +  +++  N E  K      +          +  N TW+ +
Sbjct: 72  GDFTGMIGDPTGKNVTRKPLTREDVLANAETYKEQVFKILDPAKT----TVAFNSTWMEN 127

Query: 135 IKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCR 194
           +    +++ + +  +V RML  +  + R    QS++  EF Y ++Q +D V L    +  
Sbjct: 128 LGAAGMIK-LAARQTVARMLERDDFKKRYASGQSIAIHEFLYPLVQGWDSVAL----EAD 182

Query: 195 LQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTS 253
           +++GG+DQ  N++ G +L +         + +PLL    G  KM K+L   I +     +
Sbjct: 183 VELGGTDQRFNLLMGRELQKDEGQKPQTVIMTPLLEGTDGVQKMSKSLGNYIGIT---DA 239

Query: 254 PYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATEITTMVH 311
           P + +    +I D  +  +   L+ L ++ I+   +   QG    + K  +A E+    H
Sbjct: 240 PNDMFGKIMSISDVLMWRYYDLLSGLSIAGINAQKERVEQGTNPRDIKIELAKELIARFH 299

Query: 312 GREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRH 371
              +A+ A    ++ F        +P ++++ ++    + +  L+ +A    ST+EA R 
Sbjct: 300 SEADAQAAHDDFIQRFQKKALPDEIPELTVTIEQ--DSILIANLLKEANLVASTSEAMRM 357

Query: 372 LKSNAIKINNS-IISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           +K  A+K+N    I++ KL+I               GK+      + 
Sbjct: 358 IKQGAVKLNGEDKITDTKLEIA-----KGSTAIYQVGKRKFANITVA 399


>gi|254495998|ref|ZP_05108904.1| tyrosyl-tRNA synthetase [Legionella drancourtii LLAP12]
 gi|254354786|gb|EET13415.1| tyrosyl-tRNA synthetase [Legionella drancourtii LLAP12]
          Length = 398

 Score =  384 bits (988), Expect = e-104,   Method: Composition-based stats.
 Identities = 98/406 (24%), Positives = 176/406 (43%), Gaps = 25/406 (6%)

Query: 15  RGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG   ++    EL+    +G  +    G+D TA  LH GH   L  L   Q+ GH+ I L
Sbjct: 13  RGC-EEVLPQHELEKKLQKGTPLKIKAGFDPTAPDLHLGHTVLLNKLRQFQQFGHEVIFL 71

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
           +G  T++IGDP+ ++ +R  +  + + EN +  +      +          +  N  WL 
Sbjct: 72  IGDFTAMIGDPTGKNVTRMPLSQESVLENAKTYQEQVFKILD----PQKTTVAFNSQWLG 127

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDC 193
               +DL+R   +  +V RML  +    R    Q ++  EF Y +LQ YD V L  +   
Sbjct: 128 QFTAVDLIRLAATH-TVARMLERDDFNKRYTSGQPIAIHEFLYPLLQGYDSVALKAD--- 183

Query: 194 RLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMT 252
            ++ GG+DQ  N++ G +L +         + +PL+    G  KM K+L   I +N+  T
Sbjct: 184 -VEFGGTDQKFNLLMGRELQKHYGHEPQVIMMTPLIEGLDGVKKMSKSLDNYIGINEPAT 242

Query: 253 SPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATEITTMV 310
              + +    ++ D  +  +   L+     EI  + +  ++G    + K   A EI    
Sbjct: 243 ---DMFGKIMSVSDELMWRYINLLSFKTGQEIQALKQSVVEGANPRDIKIDFAKEIVARF 299

Query: 311 HGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARR 370
           H + +AE+     +  F   I    +  +SI  +E    + L  L+ +     ST+E+ R
Sbjct: 300 HDQGQAEQVHKDFIARFQKGIIPADLEEVSIISEE---PIPLAQLLKQMNLTQSTSESIR 356

Query: 371 HLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            +K  A+K+++  + +  L +            +  GK+     HL
Sbjct: 357 MVKQGAVKVDSEKVEDPALVLAA-----GNTYVIQVGKRRIAKLHL 397


>gi|229525283|ref|ZP_04414688.1| tyrosyl-tRNA synthetase [Vibrio cholerae bv. albensis VL426]
 gi|229338864|gb|EEO03881.1| tyrosyl-tRNA synthetase [Vibrio cholerae bv. albensis VL426]
          Length = 395

 Score =  384 bits (988), Expect = e-104,   Method: Composition-based stats.
 Identities = 98/419 (23%), Positives = 176/419 (42%), Gaps = 28/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M + ++    I  +RG    I     +  L     +   +G D TA  +H GH   L  L
Sbjct: 1   MASIEAALAEI--KRGVEELIPEEELIAKLKENRPLRIKLGADPTAPDIHLGHTVILNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GH    L+G  T ++GDP+ ++ +R  +  +++  N E  K      +     K
Sbjct: 59  RTFQDLGHDVTFLIGDFTGMVGDPTGKNTTRPPLTREDVLRNAETYKKQVFKILDPAKTK 118

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N  WL  +    ++R + S  +V RML  +  + R    Q ++  EF Y +LQ
Sbjct: 119 ----IQFNSEWLSQLGAEGMIR-LASNQTVARMLERDDFKKRYNNGQPIAIHEFMYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGK 239
            YD V +    +  +++GG+DQ  N++ G +L +         L  PLL    G  KM K
Sbjct: 174 GYDSVAM----ETDVELGGTDQKFNLLMGRELQKANGQKPQVVLMMPLLVGLDGEKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINE 297
           +    I +++   +P   +    +I D  + S+ + L+  P+ E+ +       G    +
Sbjct: 230 SAHNYIGVSE---APSEMFGKIMSISDDLMWSYYELLSFRPLEEVAQFKAEVANGANPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A EI    H + +A+ A    +  F      + M      + E   G+ +  L+ 
Sbjct: 287 IKILLAKEIIARFHSQADADAAEQEFINRFQKGAMPEEM-----PEFEFESGIAISNLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +AG   ST++A R +K  A+K++   + + KL          G      GK+      +
Sbjct: 342 EAGLVASTSDALRMIKQGAVKLDGEKLEDAKLIPAC------GTSVYQVGKRKFARVTI 394


>gi|153801737|ref|ZP_01956323.1| tyrosyl-tRNA synthetase [Vibrio cholerae MZO-3]
 gi|153830951|ref|ZP_01983618.1| tyrosyl-tRNA synthetase [Vibrio cholerae 623-39]
 gi|229512893|ref|ZP_04402360.1| tyrosyl-tRNA synthetase [Vibrio cholerae TMA 21]
 gi|229530436|ref|ZP_04419824.1| tyrosyl-tRNA synthetase [Vibrio cholerae 12129(1)]
 gi|262189648|ref|ZP_06048030.1| tyrosyl-tRNA synthetase [Vibrio cholerae CT 5369-93]
 gi|124122702|gb|EAY41445.1| tyrosyl-tRNA synthetase [Vibrio cholerae MZO-3]
 gi|148873564|gb|EDL71699.1| tyrosyl-tRNA synthetase [Vibrio cholerae 623-39]
 gi|229332209|gb|EEN97697.1| tyrosyl-tRNA synthetase [Vibrio cholerae 12129(1)]
 gi|229350142|gb|EEO15095.1| tyrosyl-tRNA synthetase [Vibrio cholerae TMA 21]
 gi|262034469|gb|EEY52827.1| tyrosyl-tRNA synthetase [Vibrio cholerae CT 5369-93]
          Length = 395

 Score =  384 bits (988), Expect = e-104,   Method: Composition-based stats.
 Identities = 98/419 (23%), Positives = 176/419 (42%), Gaps = 28/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M + ++    I  +RG    I     +  L     +   +G D TA  +H GH   L  L
Sbjct: 1   MASIEAALAEI--KRGVEELIPEEELIAKLKENRPLRIKLGADPTAPDIHLGHTVILNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GH    L+G  T ++GDP+ ++ +R  +  +++  N E  K      +     K
Sbjct: 59  RTFQDLGHDVTFLIGDFTGMVGDPTGKNTTRPPLTREDVLRNAETYKQQVFKILDPAKTK 118

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N  WL  +    ++R + S  +V RML  +  + R    Q ++  EF Y +LQ
Sbjct: 119 ----IQFNSEWLSQLGAEGMIR-LASNQTVARMLERDDFKKRYNNGQPIAIHEFMYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGK 239
            YD V +    +  +++GG+DQ  N++ G +L +         L  PLL    G  KM K
Sbjct: 174 GYDSVAM----ETDVELGGTDQKFNLLMGRELQKANGQKPQVVLMMPLLVGLDGEKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINE 297
           +    I +++   +P   +    +I D  + S+ + L+  P+ E+ +       G    +
Sbjct: 230 SAHNYIGVSE---APSEMFGKIMSISDDLMWSYYELLSFRPLEEVAQFKAEVANGANPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A EI    H + +A+ A    +  F      + M      + E   G+ +  L+ 
Sbjct: 287 IKILLAKEIIARFHSQADADAAEQEFINRFQKGAMPEEM-----PEFEFESGIAISNLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +AG   ST++A R +K  A+K++   + + KL          G      GK+      +
Sbjct: 342 EAGLVASTSDALRMIKQGAVKLDGEKLEDAKLIPAC------GTSVYQVGKRKFARVTI 394


>gi|164660650|ref|XP_001731448.1| hypothetical protein MGL_1631 [Malassezia globosa CBS 7966]
 gi|159105348|gb|EDP44234.1| hypothetical protein MGL_1631 [Malassezia globosa CBS 7966]
          Length = 499

 Score =  384 bits (988), Expect = e-104,   Method: Composition-based stats.
 Identities = 137/491 (27%), Positives = 222/491 (45%), Gaps = 77/491 (15%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCS-----------QGVVTAYIGYDLTASSL 49
           +  F+S  + +L  RG + Q +  R L    +               T Y G D +A SL
Sbjct: 8   ITTFRS-VVDVLESRGMV-QATTSRALKEHLAMPGEASSTPHQHIKRTIYSGVDPSAPSL 65

Query: 50  HAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGI 109
           H G+L  L+ L      GHK + L+GG T  IGDPS R   R  + + ++  N+  I+  
Sbjct: 66  HVGNLLPLVALLHCAIYGHKALVLIGGATGAIGDPSGRSSERSALGTDQLTSNVTTIRAQ 125

Query: 110 FSSFIK------------------YGTGKT-------------DALMLNNETWLCSIKYI 138
              F                    +G+                D  ++NN  W   IK +
Sbjct: 126 IFQFFHNAAAYLSRRNILHAEPVLFGSCNQQSWENECLFQTALDIQLVNNLDWFRDIKML 185

Query: 139 DLLREIGSFFSVNRMLSFESVRSRL------KREQSLSFLEFNYMILQAYDFVELAKNYD 192
           D L  +G +  VN M++ +SV+SRL           LSF EF+Y ++QAYD+  L +   
Sbjct: 186 DFLSSVGRYVRVNDMMARDSVKSRLFPSEGGPATTGLSFTEFSYQLMQAYDYCYLHERMG 245

Query: 193 CRLQMGGSDQWGNIICGIDLGER---------------LKTPKLFALTSPLLTTASGTKM 237
           C +Q+GGSDQ GNI+ GIDL  R               ++    + LT PLL T+SG K 
Sbjct: 246 CSVQLGGSDQMGNIMAGIDLIRRQRAAHVQNDKMSDLSMRADPAYGLTLPLLMTSSGVKF 305

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEI 295
           GK+   A+W++  + S  +F+QY+    DADV  +   LT +P+ EI ++  L    +  
Sbjct: 306 GKSAGNAVWISPALLSDLDFYQYFVRSADADVERYLTSLTFMPLEEIKQVMILHSQDRSK 365

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI--------SISKDEVS 347
             A+  +A E+T +V G +   +A  A    FD  +++  +  I         + +   +
Sbjct: 366 RVAQICLANEMTELVRGPDALRRAQLATKVLFDTDVNALTLEQILYAFEGDPRLVRLTET 425

Query: 348 RGMGLLTLIVKAGFATSTNEARRHLKSN--AIKINNSIISNEKLQIKLQDFDSTGNIKLS 405
           + M LL L  + G  +S +EARR ++     + +NN  + + + +++ +   +     + 
Sbjct: 426 QTMDLLRLAAEIGLVSSRSEARRLVQQGSSGLYVNNVPVKDVQAKLEPEHLLNGQFFVMR 485

Query: 406 FGKKNHIICHL 416
            GK NH I  L
Sbjct: 486 AGKSNHKIVVL 496


>gi|332304971|ref|YP_004432822.1| tyrosyl-tRNA synthetase [Glaciecola agarilytica 4H-3-7+YE-5]
 gi|332172300|gb|AEE21554.1| tyrosyl-tRNA synthetase [Glaciecola agarilytica 4H-3-7+YE-5]
          Length = 399

 Score =  384 bits (988), Expect = e-104,   Method: Composition-based stats.
 Identities = 102/419 (24%), Positives = 181/419 (43%), Gaps = 24/419 (5%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  ++S F  +  +RG    +     +  L     +    G+D TA  LH GH   +  L
Sbjct: 1   MADWQSAFAEL--QRGAEEILLEEELIAKLKEGKPLKIKAGFDPTAPDLHLGHTVLINKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              QK GH+ I L+G  T +IGDP+ ++ +R+ +  +++  N E  K      +      
Sbjct: 59  RAFQKLGHEVIFLIGDFTGMIGDPTGKNVTRKPLTREDVLANAETYKEQVFKILD----P 114

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
           +   +  N  W+  +    +++ + S  +V RML  +  + R    Q ++  EF Y ++Q
Sbjct: 115 SKTTIRFNSEWMEELGASGMIK-LASSQTVARMLERDDFKKRYANGQPIAIHEFLYPLVQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGK 239
            +D V L  +    +++GG+DQ  N++ G +L +         L +PLL    G  KM K
Sbjct: 174 GWDSVALKSD----VELGGTDQRFNLLMGRELQKGQGQRPQTVLMTPLLEGLDGVQKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINE 297
           +L   I +     SP + +    +I D  +  +   L+   + EI +  +    G    +
Sbjct: 230 SLGNYIGIT---DSPSDMFGKIMSISDDLMWRYYDLLSFKAIEEIAQYKEQVAAGTNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K  +A EI    H    A+ A    ++ F  +     MP  +    E   GM +  L+ 
Sbjct: 287 IKIALAKEIIARFHDEAAADAAHHEFVQRFQKNAIPDEMPEFTFEAGE--EGMAVANLLK 344

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +AG   ST+EA R +K  A+K++   ++++K       F S        GK+      L
Sbjct: 345 EAGLVASTSEAMRMVKQGAVKMDGEKVADQKTT-----FRSLEQAVFQVGKRKFARVTL 398


>gi|226946610|ref|YP_002801683.1| tyrosyl-tRNA synthetase [Azotobacter vinelandii DJ]
 gi|226721537|gb|ACO80708.1| tyrosyl-tRNA synthetase [Azotobacter vinelandii DJ]
          Length = 399

 Score =  384 bits (987), Expect = e-104,   Method: Composition-based stats.
 Identities = 102/408 (25%), Positives = 172/408 (42%), Gaps = 24/408 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG    +     ++ L S   +    G+D TA  LH GH   +  L   Q  GH+ I
Sbjct: 10  LIKRGAEEVLVEADLVEKLKSGQPLRVKAGFDPTAPDLHLGHTVLINKLRQFQDLGHQVI 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T +IGDP+ +  +R  +   ++ EN E  K      +     +    ++ N  W
Sbjct: 70  FLVGDFTGMIGDPTGKSATRPPLTRDQVLENAETYKAQVFKILDPAKTE----VVFNSAW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +  +   D +R + S  +V RML  +    R    QS++  EF Y ++Q YD V L  + 
Sbjct: 126 IEQLTPADFVR-LTSHCTVARMLERDDFSKRYAANQSIALHEFLYPLMQGYDSVALRAD- 183

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G +L           +T PLL    G  KM K+L   + + + 
Sbjct: 184 ---VELGGTDQKFNLLMGRELQRVYGQKSQCIVTMPLLEGLDGVKKMSKSLGNYVGIQEP 240

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEITT 308
              P   +    +I D+ +  + + L+   M EID  R    +G    + K  +A EI T
Sbjct: 241 ---PGVMYGKLVSIPDSLMWRYFELLSFRSMEEIDAFRSEVDRGANPRDIKIKLAEEIVT 297

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
             HG   A  A  +A          + +P I +   E    M +  ++ KAG   +   A
Sbjct: 298 RFHGEVAAANAHRSAGNRMKDGELPESLPEIQLLSTE---DMPIAAVLNKAGLVKNAAAA 354

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           R  L S  ++++ +++ +         F          GKK+     L
Sbjct: 355 RDLLSSGGVRVDGAVV-DRGFL-----FQLGSTHVCQAGKKSFAKIIL 396


>gi|291458844|ref|ZP_06598234.1| tyrosine--tRNA ligase [Oribacterium sp. oral taxon 078 str. F0262]
 gi|291418098|gb|EFE91817.1| tyrosine--tRNA ligase [Oribacterium sp. oral taxon 078 str. F0262]
          Length = 336

 Score =  384 bits (987), Expect = e-104,   Method: Composition-based stats.
 Identities = 143/339 (42%), Positives = 202/339 (59%), Gaps = 8/339 (2%)

Query: 80  IIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYID 139
           +IGDPS R + RRMM   EI  N E+I+   S FI +G GK  A+M NN  WL ++ ++D
Sbjct: 1   MIGDPSGRTDMRRMMSVSEIDHNCERIREQMSRFIDFGEGK--AVMANNADWLRNLNFMD 58

Query: 140 LLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGG 199
            +RE+G  FSVN ML      +RL  EQ LSFLEF YM +Q YDF  L + Y C +Q GG
Sbjct: 59  FMREVGPNFSVNEMLRARCYVNRL--EQGLSFLEFCYMPMQGYDFYMLFQKYGCNMQFGG 116

Query: 200 SDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQ 259
            DQW N++ G +L  +       A+T  LLT   G KMGKT++GA+WL+ E TSPY F+Q
Sbjct: 117 DDQWSNMLAGTELIRKKLGEDAHAMTITLLTNKEGKKMGKTVNGAVWLDPEKTSPYEFYQ 176

Query: 260 YWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKA 319
           YWRN+DDADV+   K LT LP+ EI +M   +G E+N AK+I+A ++T +VHG EEA+KA
Sbjct: 177 YWRNVDDADVIKCLKLLTFLPLEEIRKMESFEGAELNRAKEILAFQLTELVHGEEEAKKA 236

Query: 320 ATAAMECFDMSIHSQHMPTISISKDEVSRG--MGLLTLIVKAGFATSTNEARRHLKSNAI 377
            +AA E F     S++MPT+S+   +      + +L ++V +   +S  EARR++    +
Sbjct: 237 ESAARELFSGGGSSENMPTVSLKDTDFREDGTIDILAVLVLSKLCSSRAEARRNVVQGGV 296

Query: 378 KINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             +   I +     + +DF     +    GKK+     L
Sbjct: 297 SQDGERIEDIGRSYRREDFKEG--LIFRRGKKSFAKLLL 333


>gi|229520922|ref|ZP_04410344.1| tyrosyl-tRNA synthetase [Vibrio cholerae TM 11079-80]
 gi|229342155|gb|EEO07151.1| tyrosyl-tRNA synthetase [Vibrio cholerae TM 11079-80]
          Length = 395

 Score =  384 bits (987), Expect = e-104,   Method: Composition-based stats.
 Identities = 98/419 (23%), Positives = 176/419 (42%), Gaps = 28/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M + ++    I  +RG    I     +  L     +   +G D TA  +H GH   L  L
Sbjct: 1   MASIEAALAEI--KRGVEELIPEEELIAKLKENRPLRIKLGADPTAPDIHLGHTVILNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GH    L+G  T ++GDP+ ++ +R  +  +++  N E  K      +     K
Sbjct: 59  RTFQDLGHDVTFLIGDFTGMVGDPTGKNTTRPPLTREDVLRNAETYKQQVFKILDPAKTK 118

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N  WL  +    ++R + S  +V RML  +  + R    Q ++  EF Y +LQ
Sbjct: 119 ----IQFNSEWLSQLGAEGMIR-LASNQTVARMLERDDFKKRYSNGQPIAIHEFMYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGK 239
            YD V +    +  +++GG+DQ  N++ G +L +         L  PLL    G  KM K
Sbjct: 174 GYDSVAM----ETDVELGGTDQKFNLLMGRELQKANGQKPQVVLMMPLLVGLDGEKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINE 297
           +    I +++   +P   +    +I D  + S+ + L+  P+ E+ +       G    +
Sbjct: 230 SAHNYIGVSE---APSEMFGKIMSISDDLMWSYYELLSFRPLEEVAQFKAEVANGSNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A EI    H + +A+ A    +  F      + M      + E   G+ +  L+ 
Sbjct: 287 IKILLAKEIIARFHSQADADAAEQEFINRFQKGAMPEEM-----PEFEFESGIAISNLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +AG   ST++A R +K  A+K++   + + KL          G      GK+      +
Sbjct: 342 EAGLVASTSDALRMIKQGAVKLDGEKLEDAKLIPAC------GTSVYQVGKRKFARVTI 394


>gi|221139710|ref|NP_001137392.1| tyrosyl-tRNA synthetase, mitochondrial [Danio rerio]
 gi|326679969|ref|XP_003201421.1| PREDICTED: tyrosyl-tRNA synthetase, mitochondrial-like [Danio
           rerio]
          Length = 474

 Score =  384 bits (987), Expect = e-104,   Method: Composition-based stats.
 Identities = 132/426 (30%), Positives = 206/426 (48%), Gaps = 25/426 (5%)

Query: 15  RGFIHQISNP----RELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           RG +           E+  L   G  + Y G+D TA SLHAG+L  ++ L   +  GH  
Sbjct: 45  RGLLKDSFPEVAAQAEIPDLLRSGPQSIYCGFDPTADSLHAGNLLAIIGLLHFRSAGHHI 104

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK----YGTGKTDA--- 123
           I+L+GG T+ IGDPS R   R  +    +QEN   I             Y    +     
Sbjct: 105 IALLGGATAQIGDPSGRQTERERLSPAAVQENARGILESLHRIFTHHELYFCPDSSRLGR 164

Query: 124 -LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
             +LNN +W      ++   E+G  F +  MLS  SV++RLK  + +SF EF+Y + QA+
Sbjct: 165 LTVLNNRSWYKDYDLLEFFSEVGRSFRMGTMLSRHSVQTRLKSAEGMSFTEFSYQLFQAF 224

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DF +L + + CR+Q+GG+DQ GNI+ G +   R    +++ LT PL+TT+ G K+GKT  
Sbjct: 225 DFYQLHQLHGCRIQLGGTDQLGNIMSGHEFIHRKTGEEVYGLTVPLVTTSMGDKLGKTAG 284

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKK 300
            A+WLN++ TSP+ F+QY+  + D  V  + K  T L +SE++ + + Q K+     A K
Sbjct: 285 NAVWLNRDKTSPFEFYQYFLRLPDNSVERYLKLFTFLSLSEVENLMEQQRKDPGKRIAHK 344

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHS-QHMPTISIS---------KDEVSRGM 350
            +A E+T +VHG++  E A       +  SI + + M    +          +  +  G 
Sbjct: 345 RLAAEVTKLVHGKDGLESAKRCTTALYHSSIEALEQMSDTELQEIFREAPFHEFFLEPGT 404

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQ-IKLQDFDSTGNIKLSFGKK 409
            +L    +A          + +K   + IN+    N +   I  Q   S G   +  GKK
Sbjct: 405 TVLDACRRARAIPDGPRGYQMIKDGGVWINHQRAENPEQVLIVGQQILSNGLSLIRVGKK 464

Query: 410 NHIICH 415
           N  I  
Sbjct: 465 NFHILK 470


>gi|97197487|sp|Q2NJG7|SYY_AYWBP RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
          Length = 413

 Score =  384 bits (987), Expect = e-104,   Method: Composition-based stats.
 Identities = 134/416 (32%), Positives = 210/416 (50%), Gaps = 16/416 (3%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           F   L  R  I   +N  ++  L     V  Y G+D T+ SL  GHL Q+ ++  +Q+ G
Sbjct: 3   FYEELKWRNLIKDCNNEIQVKELLDNNQVKFYCGFDPTSHSLTVGHLIQITMILLMQRQG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H P+ L+GG T +IGDP    E R+++  +   +N + I+    + +           +N
Sbjct: 63  HLPVILVGGATGLIGDPK-ETEERKLLSLENSLQNAKSIESQLKTIL----LNKQVEFVN 117

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  I  I  LR  G FF++N MLS   V  RL     +SF EF+YMILQ+ DF  L
Sbjct: 118 NYQWLSQIDIISFLRNYGKFFNINYMLSKHVVAKRLAS--GISFTEFSYMILQSLDFHHL 175

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLLTTASGTKMGKTLSGAIW 246
            KN+  RLQ+GGSDQWGNI  G+++  +L+       +++PLL  + GTK GK+    +W
Sbjct: 176 YKNHKVRLQLGGSDQWGNITSGLEIIRKLEKKSDALGVSTPLLLNSDGTKFGKSEKRVLW 235

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIAT 304
           LN  MTSPY  +QY+ N+ D +V+++ K LT +P   I  + K  L+  +   A+K +  
Sbjct: 236 LNPLMTSPYEIYQYFLNVSDKEVINYLKMLTLIPKKGILELEKKTLENPQKRLAQKALTQ 295

Query: 305 EITTMVHGREEAEKAATAAMECFD----MSIHSQH--MPTISISKDEVSRGMGLLTLIVK 358
            I  ++H  +  ++        F      S   +   +   ++    +   + L+  +V+
Sbjct: 296 SIINLIHSSDILQECIKTNQILFSNAKKESFQEKDFILLQKTLFCHSIKEDILLVDALVQ 355

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
              ATS +EAR  +K N IK+ N  I +    I  ++      I L  GKKN+ + 
Sbjct: 356 TKLATSKSEAREFIKDNTIKLFNQKIKSLDFIITKENTLFGKYILLKKGKKNNALI 411


>gi|85057589|ref|YP_456505.1| tyrosyl-tRNA synthetase [Aster yellows witches'-broom phytoplasma
           AYWB]
 gi|84789694|gb|ABC65426.1| tyrosyl-tRNA synthetase [Aster yellows witches'-broom phytoplasma
           AYWB]
          Length = 430

 Score =  384 bits (987), Expect = e-104,   Method: Composition-based stats.
 Identities = 134/416 (32%), Positives = 210/416 (50%), Gaps = 16/416 (3%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           F   L  R  I   +N  ++  L     V  Y G+D T+ SL  GHL Q+ ++  +Q+ G
Sbjct: 20  FYEELKWRNLIKDCNNEIQVKELLDNNQVKFYCGFDPTSHSLTVGHLIQITMILLMQRQG 79

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H P+ L+GG T +IGDP    E R+++  +   +N + I+    + +           +N
Sbjct: 80  HLPVILVGGATGLIGDPK-ETEERKLLSLENSLQNAKSIESQLKTIL----LNKQVEFVN 134

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  I  I  LR  G FF++N MLS   V  RL     +SF EF+YMILQ+ DF  L
Sbjct: 135 NYQWLSQIDIISFLRNYGKFFNINYMLSKHVVAKRLAS--GISFTEFSYMILQSLDFHHL 192

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLLTTASGTKMGKTLSGAIW 246
            KN+  RLQ+GGSDQWGNI  G+++  +L+       +++PLL  + GTK GK+    +W
Sbjct: 193 YKNHKVRLQLGGSDQWGNITSGLEIIRKLEKKSDALGVSTPLLLNSDGTKFGKSEKRVLW 252

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIAT 304
           LN  MTSPY  +QY+ N+ D +V+++ K LT +P   I  + K  L+  +   A+K +  
Sbjct: 253 LNPLMTSPYEIYQYFLNVSDKEVINYLKMLTLIPKKGILELEKKTLENPQKRLAQKALTQ 312

Query: 305 EITTMVHGREEAEKAATAAMECFD----MSIHSQH--MPTISISKDEVSRGMGLLTLIVK 358
            I  ++H  +  ++        F      S   +   +   ++    +   + L+  +V+
Sbjct: 313 SIINLIHSSDILQECIKTNQILFSNAKKESFQEKDFILLQKTLFCHSIKEDILLVDALVQ 372

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
              ATS +EAR  +K N IK+ N  I +    I  ++      I L  GKKN+ + 
Sbjct: 373 TKLATSKSEAREFIKDNTIKLFNQKIKSLDFIITKENTLFGKYILLKKGKKNNALI 428


>gi|327483435|gb|AEA77842.1| Tyrosyl-tRNA synthetase cluster 1 [Vibrio cholerae LMA3894-4]
          Length = 395

 Score =  384 bits (987), Expect = e-104,   Method: Composition-based stats.
 Identities = 98/419 (23%), Positives = 176/419 (42%), Gaps = 28/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M + ++    I  +RG    I     +  L     +   +G D TA  +H GH   L  L
Sbjct: 1   MASIEAALAEI--KRGVEELIPEEELIAKLKENRPLRIKLGADPTAPDIHLGHTVILNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GH    L+G  T ++GDP+ ++ +R  +  +++  N E  K      +     K
Sbjct: 59  RTFQDLGHDVTFLIGDFTGMVGDPTGKNTTRPPLTREDVLRNAETYKQQVFKILDPAKTK 118

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N  WL  +    ++R + S  +V RML  +  + R    Q ++  EF Y +LQ
Sbjct: 119 ----IQFNSEWLSQLGAEGMIR-LASNQTVARMLERDDFKKRYNNGQPIAIHEFMYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGK 239
            YD V +    +  +++GG+DQ  N++ G +L +         L  PLL    G  KM K
Sbjct: 174 GYDSVAM----ETDVELGGTDQKFNLLMGRELQKANGQKPQVVLMMPLLVGLDGEKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINE 297
           +    I +++   +P   +    +I D  + S+ + L+  P+ E+ +       G    +
Sbjct: 230 SAHNYIGVSE---APSEMFGKIMSISDDLMWSYYELLSFRPLEEVAQFKAEVANGSNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A EI    H + +A+ A    +  F      + M      + E   G+ +  L+ 
Sbjct: 287 IKILLAKEIIARFHSQADADAAEQEFINRFQKGAMPEEM-----PEFEFESGIAISNLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +AG   ST++A R +K  A+K++   + + KL          G      GK+      +
Sbjct: 342 EAGLVASTSDALRMIKQGAVKLDGEKLEDAKLIPAC------GTSVYQVGKRKFARVTI 394


>gi|294139677|ref|YP_003555655.1| tyrosyl-tRNA synthetase [Shewanella violacea DSS12]
 gi|293326146|dbj|BAJ00877.1| tyrosyl-tRNA synthetase [Shewanella violacea DSS12]
          Length = 398

 Score =  384 bits (987), Expect = e-104,   Method: Composition-based stats.
 Identities = 102/420 (24%), Positives = 177/420 (42%), Gaps = 25/420 (5%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M      F  I  +RG    +     L+ L     +   +G D TA  +H GH   L  +
Sbjct: 1   MADLDQAFAEI--KRGTDEILLEADLLEKLKEGRPLRIKLGADPTAPDIHLGHTVILNKM 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+ I L+G  T ++GDPS ++ +R  +  +++  N E  K      +     +
Sbjct: 59  RTFQELGHEVIFLIGDFTGMVGDPSGKNSTRPPLTREQVLANAETYKEQVYKILDPAKTR 118

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N TWL  +    ++R + S  +V RM+  +  + R    QS++  EF Y +LQ
Sbjct: 119 ----IEFNSTWLEPLGAAGMIR-LASKQTVARMMERDDFKKRYTSGQSIAIHEFMYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGK 239
            YD V L    +  +++GG+DQ  N++ G +L +         +  PLL    G  KM K
Sbjct: 174 GYDSVAL----EADVELGGTDQKFNLLMGRELQKSEGQKPQTVIMMPLLEGLDGVKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINE 297
           +    I +++        +    +I D  +  + + L+  P+ EI++       G    +
Sbjct: 230 SAHNYIGVSEPAG---EMFGKIMSISDVLMWRYFELLSFRPLGEIEQFKADIEAGANPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K  +A EI T  H    AE A    +  F        +  + ++   V  G+ +  L+ 
Sbjct: 287 IKIALAKEIITRFHDEAAAEAAHQEFINRFQKGAIPDDIEEVELN---VGDGIAIANLLK 343

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           + GF  ST++A R +K  A KI+   I + +LQ+               GK+      L 
Sbjct: 344 ELGFVKSTSDAMRMIKQGAAKIDGVKIEDTRLQLTA-----GTTGIFQMGKRKFAKVTLV 398


>gi|297171169|gb|ADI22179.1| tyrosyl-tRNA synthetase [uncultured gamma proteobacterium
           HF0200_24F15]
          Length = 401

 Score =  384 bits (987), Expect = e-104,   Method: Composition-based stats.
 Identities = 98/413 (23%), Positives = 179/413 (43%), Gaps = 23/413 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D +  L  RG    I     ++ L     +   +G+D TA  LH GH   +  +   Q  
Sbjct: 8   DLMVELR-RGVEEIIPEEDLIERLKIGRPLRVKVGFDPTAPDLHLGHTVIVNKMRQFQDL 66

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+ I L+G  T +IGDPS +  +R  +   EI++N E  +      +     +    + 
Sbjct: 67  GHEIIFLIGDFTGMIGDPSGKSVTRPPLSRDEIEKNAETYREQVFKILD----RQMTRIE 122

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
            N  W   +    ++R  G + ++ R++  +   +R +  + +   E  Y ++Q YD V 
Sbjct: 123 FNSRWGNELGAEGIIRLAGRY-TMARIMERDDFSTRYESGEPIGIHELLYPLMQGYDSVA 181

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAI 245
           L    +  +++GG+DQ  N++ G +L ++         T PLL    G  KM K+L   +
Sbjct: 182 L----EADVELGGTDQKFNLLVGRELQKQYSQTPQVVFTLPLLEGLDGVQKMSKSLGNYV 237

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIA 303
            + +    P   +    +I D  +  +   L+   ++E+D  R+    G    + K ++A
Sbjct: 238 GITE---PPDEMFGKLMSISDELMWRYFDLLSFRTLAELDQLRIEVQHGANPRDIKFMLA 294

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
            EI    H   EA++A    +E F       ++    IS  +  + + + T+I +AG   
Sbjct: 295 EEIVRRFHSLREAKRAKEEFVERFQKGAMPANIEMKIISSKD--KEVPIATVIKEAGLVK 352

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           ST+EA R L   A++IN   +++   +I L D           GK+      +
Sbjct: 353 STSEALRMLDQGAVRINGERVTDRDRKIGLGDAG-----VFQVGKRRFARVQI 400


>gi|330505225|ref|YP_004382094.1| tyrosyl-tRNA synthetase [Pseudomonas mendocina NK-01]
 gi|328919511|gb|AEB60342.1| tyrosyl-tRNA synthetase [Pseudomonas mendocina NK-01]
          Length = 399

 Score =  384 bits (987), Expect = e-104,   Method: Composition-based stats.
 Identities = 98/408 (24%), Positives = 173/408 (42%), Gaps = 24/408 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG    +     ++ L     +    G+D TA  LH GH   +  L   Q+ GH+ +
Sbjct: 10  LIKRGAEEVLVEAELVEKLKRGQPLRIKAGFDPTAPDLHLGHTVLINKLRQFQELGHQVV 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T +IGDPS +  +R  +  +++ +N E  K      +     +    +  N TW
Sbjct: 70  FLIGDFTGMIGDPSGKSATRPPLTREQVLDNAETYKQQVFKILDPAKTE----VAFNSTW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +  +K  D +R + S ++V RML  +    R    Q ++  EF Y ++Q YD V L  + 
Sbjct: 126 MDQLKPADFIR-LASQYTVARMLERDDFDKRYTGNQPIAIHEFLYPLVQGYDSVALKAD- 183

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G +L           +T PLL    G  KM K+L   + + + 
Sbjct: 184 ---VELGGTDQKFNLLMGRELQRAYGQESQCIVTMPLLEGLDGVKKMSKSLGNYVGIQE- 239

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATEITT 308
             +P   +    ++ D  +  + + L+   M EI++  +   QG    + K  +A E+  
Sbjct: 240 --APGVMYNKLVSMPDVLMWRYFELLSFRSMEEIEQFKRDVEQGANPRDIKIKLAEELVA 297

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
             HG E A  A  +A            +P + +   E    M + +++ KAG   +   A
Sbjct: 298 RFHGEEAAASAHRSAGNRMKDGELPADLPEVELVSVE---DMPISSVLNKAGLVKNAAVA 354

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           R  L S  ++++  ++    L      F          GKK      L
Sbjct: 355 RDLLGSGGVRVDGEVVDRAFL------FKLGSTHVCQAGKKAFARITL 396


>gi|254292197|ref|ZP_04962965.1| tyrosyl-tRNA synthetase [Vibrio cholerae AM-19226]
 gi|150421878|gb|EDN13857.1| tyrosyl-tRNA synthetase [Vibrio cholerae AM-19226]
          Length = 395

 Score =  384 bits (986), Expect = e-104,   Method: Composition-based stats.
 Identities = 98/419 (23%), Positives = 176/419 (42%), Gaps = 28/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M + ++    I  +RG    I     +  L     +   +G D TA  +H GH   L  L
Sbjct: 1   MASIEAALAEI--KRGVEELIPEEELIAKLKENRPLRIKLGADPTAPDIHLGHTVILNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GH    L+G  T ++GDP+ ++ +R  +  +++  N E  K      +     K
Sbjct: 59  RTFQDLGHDVTFLIGDFTGMVGDPTGKNTTRPPLTREDVLRNAETYKQQVFKILDPAKTK 118

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N  WL  +    ++R + S  +V RML  +  + R    Q ++  EF Y +LQ
Sbjct: 119 ----IQFNSEWLSKLGAEGMIR-LASNQTVARMLERDDFKKRYNNGQPIAIHEFMYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGK 239
            YD V +    +  +++GG+DQ  N++ G +L +         L  PLL    G  KM K
Sbjct: 174 GYDSVAM----ETDVELGGTDQKFNLLMGRELQKANGQKPQVVLMMPLLVGLDGEKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINE 297
           +    I +++   +P   +    +I D  + S+ + L+  P+ E+ +       G    +
Sbjct: 230 SAHNYIGVSE---APSEMFGKIMSISDDLMWSYYELLSFRPLEEVAQFKAEVANGTNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A EI    H + +A+ A    +  F      + M      + E   G+ +  L+ 
Sbjct: 287 IKILLAKEIIARFHSQADADAAEQEFINRFQKGAMPEEM-----PEFEFESGIAISNLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +AG   ST++A R +K  A+K++   + + KL          G      GK+      +
Sbjct: 342 EAGLVASTSDALRMIKQGAVKLDGEKLEDAKLIPAC------GTSVYQVGKRKFARVTI 394


>gi|289724829|gb|ADD18356.1| tyrosyl-tRNA synthetase [Glossina morsitans morsitans]
          Length = 446

 Score =  384 bits (986), Expect = e-104,   Method: Composition-based stats.
 Identities = 130/432 (30%), Positives = 208/432 (48%), Gaps = 28/432 (6%)

Query: 12  LSERGFIHQI---SNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L+ER F   +   +   ++  +      T Y G+D TA SLH G+L  +M L   Q+ GH
Sbjct: 12  LTERDFFQDLFPDTARPQITKIFENSSQTIYAGFDPTAESLHVGNLLVIMGLLHFQRAGH 71

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFI-----------KYG 117
            PI+L+GG T++IGDPS R   R  ++   +Q N+E IK                  ++ 
Sbjct: 72  HPIALLGGATALIGDPSHRKTERSQLKKSLVQRNLEAIKHQLMRIFENHQNFLWDDKRHQ 131

Query: 118 TGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYM 177
                  ++NN  W  ++  ID + + G  F + +MLS  SV+SRL+ E  +SF EF Y 
Sbjct: 132 RPLPQLRIVNNAEWYENLNIIDFISQNGRHFRLGQMLSRTSVQSRLEAEGGMSFAEFTYQ 191

Query: 178 ILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLLTTASGTK 236
             QAYD++ L +NY+CR Q+GGSDQ GN++ G +L  R +   ++F LT P++T   G K
Sbjct: 192 AFQAYDWLHLLRNYNCRFQLGGSDQMGNLMSGHELISRTEAKTEVFGLTLPIITNEEGDK 251

Query: 237 MGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI- 295
            GK+   A+WL++E TS +  +Q++    DA+V    K  T L + EI+++     KE  
Sbjct: 252 FGKSGGTAVWLDQEKTSAFALYQFFIRRPDAEVEKLLKLFTFLSLPEIEKLMSEHRKEPE 311

Query: 296 -NEAKKIIATEITTMVHGREEAEKAATAAMECFDM----------SIHSQHMPTISISKD 344
             +A+ I+A ++T +VHG    ++A       +                Q +   ++ + 
Sbjct: 312 KRKAQTILAEDVTLLVHGENGLKQAERITNALYKGQVEGLAELNCGEVQQTLNGATLVEL 371

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ-DFDSTGNIK 403
                + +L L +KA    +  +A R + +    IN     N    I         G   
Sbjct: 372 LAEPDITILQLAMKAKCFPTEADAVRIITAGGFYINQKRSQNIAEIISHGIHVLRNGLTI 431

Query: 404 LSFGKKNHIICH 415
           L  GK+N  I  
Sbjct: 432 LRVGKRNFYIVR 443


>gi|297170828|gb|ADI21848.1| tyrosyl-tRNA synthetase [uncultured gamma proteobacterium
           HF0130_25M15]
          Length = 404

 Score =  384 bits (986), Expect = e-104,   Method: Composition-based stats.
 Identities = 104/422 (24%), Positives = 192/422 (45%), Gaps = 25/422 (5%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M + K   L I  +RG    +     L+ L     +   +G+D TA  LH GH   +  +
Sbjct: 1   MTSNKEQILEI--KRGVDEILVEKDFLEKLKKNKPLKIKVGFDPTAPDLHLGHTVIINKM 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+ I L+G  T +IGDPS  +E+R ++  ++++EN    K      +     +
Sbjct: 59  RQFQEFGHEVIFLIGDYTGMIGDPSGVNETRPVLTIEQVKENARTYKNQIFKILDKDKTR 118

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N +W+  +   +L+ +I S ++V RML  +  + R K E  +S  EF Y ++Q
Sbjct: 119 ----IEFNSSWMNKVTSAELI-DIASKYTVARMLERDDFKKRFKSENPISIHEFIYPLVQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGK 239
            YD V L    +C ++MGG+DQ  N++ G  L +         +T PLL    G  KM K
Sbjct: 174 GYDSVAL----ECDVEMGGTDQKFNLLVGRHLQQLYGQEPQTIITLPLLEGLDGVKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINE 297
           + +  + LN       + +    +I D  +  + + +++  + EI   + +   G    +
Sbjct: 230 SANNYVALNDSGD---DMFGKIMSISDDLMWRYFELVSSKDLKEIKNLKDSVNDGVNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG---MGLLT 354
            K ++A EI    H +  A+KA  + M+ F      + +    +S  ++      + L  
Sbjct: 287 IKFLLAEEIVERFHNQSIAKKAKESFMQRFQKGGIPEDIDFTEVSIKDIQNDDGEINLPR 346

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           L+       S ++  R +K+ +++I+   IS   L+I+     +   + LS GK+  I  
Sbjct: 347 LLAHTNLVNSISDGHRAIKAGSVRIDGEKISQISLEIQ-----NKSELVLSQGKRRFIKV 401

Query: 415 HL 416
            +
Sbjct: 402 KI 403


>gi|304310529|ref|YP_003810127.1| Tyrosyl-tRNA synthetase, class Ib [gamma proteobacterium HdN1]
 gi|301796262|emb|CBL44470.1| Tyrosyl-tRNA synthetase, class Ib [gamma proteobacterium HdN1]
          Length = 404

 Score =  384 bits (986), Expect = e-104,   Method: Composition-based stats.
 Identities = 98/408 (24%), Positives = 178/408 (43%), Gaps = 21/408 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG    +     ++ L     +    G+D TA  LH GH   +  L   Q  GH+  
Sbjct: 14  LIKRGVFEILLEAELIEKLRQGRPLKIKAGFDPTAPDLHLGHTVLINKLKVFQDLGHEIY 73

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T +IGDPS ++++R  +  +++  N +  +      +     K    ++ N  W
Sbjct: 74  FLIGDFTGMIGDPSGKNQTRPPLSVEQVMANAKTYEDQIFKILDREKTK----VVFNSAW 129

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L  +    L+R + S  +V RML  +    R K EQ ++  EF Y ++Q YD V L    
Sbjct: 130 LEKLGAAGLIR-LASNQTVARMLERDDFSKRYKAEQPIAIHEFLYPLIQGYDSVAL---- 184

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKE 250
           +  ++MGG+DQ  N++ G +L +         +  PLL    G  KM K+L   + +N  
Sbjct: 185 EADVEMGGTDQRFNLLMGRELQKASGQAPQTVIMVPLLEGLDGVQKMSKSLGNYVGIN-- 242

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIATEITT 308
             +P   +    ++ D+ +  + + L+   + EI    +    G      K+++A EI  
Sbjct: 243 -DAPGEMYTKLLSVPDSLMWRYFELLSFRTVEEIADFRRQVDSGSSPQAFKQLLAEEIIA 301

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
             HG   A+ A   A   FD     + MP I +   +   G+ ++     A   ++T +A
Sbjct: 302 RFHGESAAQAAKRGAGNRFDWGDAPEDMPEIELVAPD-GAGVPVVNAAKAAALVSTTTQA 360

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           R  ++ +A+++   ++S+    + +      G   L  GKK      +
Sbjct: 361 RSFVQQSALRVGGRVVSDVSEVLPV-----GGPYILQAGKKKFARVFV 403


>gi|114777315|ref|ZP_01452326.1| tyrosyl-tRNA synthetase [Mariprofundus ferrooxydans PV-1]
 gi|114552460|gb|EAU54943.1| tyrosyl-tRNA synthetase [Mariprofundus ferrooxydans PV-1]
          Length = 394

 Score =  383 bits (985), Expect = e-104,   Method: Composition-based stats.
 Identities = 98/391 (25%), Positives = 171/391 (43%), Gaps = 27/391 (6%)

Query: 24  PRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIG 82
             +L +   +G  +    G+D TA  LH GH   L  L   Q  GH+ + L+G  T  IG
Sbjct: 24  EAKLKLAAKEGRPLRVKAGFDPTAPDLHLGHTVLLEKLRQFQHCGHQVVFLIGDFTGTIG 83

Query: 83  DPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLR 142
           DP+ ++E+R  +   E+  N E  K      +          +  N  WL  +   DL+R
Sbjct: 84  DPTGKNETRPPLTHDEVLLNAESYKEQVFKVLD----PKQTEVRFNSEWLGQLTAADLIR 139

Query: 143 EIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQ 202
             G   +V RML  +    R K  QS++  EF Y ++Q YD V L  +    +++GG+DQ
Sbjct: 140 IAGK-ATVARMLERDDFEKRYKGGQSIAIHEFLYPLVQGYDSVALDAD----VELGGNDQ 194

Query: 203 WGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYW 261
             N++ G  L +     +   +T PLL    G  KM K+L+  + + +        +   
Sbjct: 195 KFNLLMGRQLQDAYGKAQQVIMTMPLLEGLDGINKMSKSLNNYVGVAEPAK---EQFGKL 251

Query: 262 RNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAAT 321
            ++ D  +  + + LT + + EI  M         EAKK++A  I    HG     +A  
Sbjct: 252 MSVSDDLMFKYYELLTDMDLDEIRAM------HPMEAKKLLAATIVERFHGEGAGAQARA 305

Query: 322 AAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINN 381
                F        +P  +++ ++    + ++  + +AG   S  EA R +K NA+ I+ 
Sbjct: 306 GFESQFAKKEIPDDVPEATLAGED--GALWIVHALTQAGLTASNGEAIRMIKQNALSIDG 363

Query: 382 SIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
             ++++ L++        G   +  GK+  +
Sbjct: 364 DKVTDKDLKLAP-----GGPYLIKLGKRKFV 389


>gi|332981744|ref|YP_004463185.1| tyrosyl-tRNA synthetase [Mahella australiensis 50-1 BON]
 gi|332699422|gb|AEE96363.1| tyrosyl-tRNA synthetase [Mahella australiensis 50-1 BON]
          Length = 404

 Score =  383 bits (985), Expect = e-104,   Method: Composition-based stats.
 Identities = 97/406 (23%), Positives = 185/406 (45%), Gaps = 28/406 (6%)

Query: 18  IHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPIS 72
           + +I +  +L     +       +T  +G D +A  +H GH   L  L   Q  GH+ + 
Sbjct: 14  VAEIISEEDLRKKLEKSHQENKPLTIKLGLDPSAPDIHMGHTVVLRKLKQFQDLGHQIVL 73

Query: 73  LMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL 132
           ++G  T +IGDP+ + E+R+ +  +++ EN +  +      +         ++  N  WL
Sbjct: 74  IIGDFTGMIGDPTGKSETRKQLTREQVLENAKTYQKQIYKILDPDRT----IIRFNSEWL 129

Query: 133 CSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYD 192
             + + D++  + S ++V+RML  E  + R++ +Q +S  EF Y ++QAYD + LA +  
Sbjct: 130 AKLSFEDVI-VLCSKYTVSRMLEREDFKKRMESQQPISIHEFFYPLMQAYDSIALAAD-- 186

Query: 193 CRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTK-MGKTLSGAIWLNKEM 251
             +++GG+DQ  NI+ G  L          A+  P+L    G K M K+L   I +N+  
Sbjct: 187 --VELGGTDQKFNILMGRTLQREYGQEPQVAMLMPILEGTDGVKKMSKSLGNYIGINE-- 242

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLP---MSEIDRMAKLQGKEINEAKKIIATEITT 308
            SP   +    +I D  ++ + + LT +    ++E+    +       + K  +A E+ T
Sbjct: 243 -SPDEIYGKTMSIPDELIIRYYELLTDIHPDKLNELKEQMESSLLNPRDVKMALAKELVT 301

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
           + HG + A+ A    +  F        +  I +  D +   + L   +     A +++E 
Sbjct: 302 LYHGAQAAQAAEKQFVSIFQKGDIPDDIEEIKVPADVLKDSIWLPRFLADHKLAPTSSEG 361

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           RR ++  A+KIN    S E +++K  D        +  GK+     
Sbjct: 362 RRLIQQGAVKINGQKSSEENVRLKSGD-------IIQVGKRRFAKI 400


>gi|260893540|ref|YP_003239637.1| tyrosyl-tRNA synthetase [Ammonifex degensii KC4]
 gi|260865681|gb|ACX52787.1| tyrosyl-tRNA synthetase [Ammonifex degensii KC4]
          Length = 405

 Score =  383 bits (985), Expect = e-104,   Method: Composition-based stats.
 Identities = 96/412 (23%), Positives = 180/412 (43%), Gaps = 26/412 (6%)

Query: 12  LSERGFIHQISNPRELDIL----CSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           L +RG    I+    +  L     +   +   +G D TA  +H GH   L  L   Q+ G
Sbjct: 10  LIKRGVAEIITEEELVRKLERSLATGVPLNVKLGLDPTAPDIHLGHTVVLQKLRHFQELG 69

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+ I ++G  T+ IGDP+ + E+R+ +  +E+  N    K      +     +    ++ 
Sbjct: 70  HRTIIVLGDFTARIGDPTGKLETRKQLSEEEVLANARTYKEQIFKVLDPEKTE----IVF 125

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N TWL  + + ++++ + + ++V RML  E    R +    +S  EF Y ++Q YD V L
Sbjct: 126 NSTWLAPLTFAEVIK-LAAHYTVARMLEREDFSKRFRAGLPISIHEFFYPLMQGYDSVVL 184

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIW 246
             +    +++GG+DQ  N++ G  L E        A+ +P+L    G  KM K+L   + 
Sbjct: 185 RAD----VELGGTDQRFNLLMGRTLQEAYGQEPQVAIMTPILEGLDGVQKMSKSLGNYVG 240

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLP---MSEIDRMAKLQGKEINEAKKIIA 303
           +      P   +    ++ D  +  + + +T +P   +  I++  K       +AK ++A
Sbjct: 241 VT---DPPEEMYGKLMSLPDELIARYLRLVTDVPEEEIERIEQEMKEGELNPRDAKMLLA 297

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFA 362
             +    H  E A KA    +  F        +P   +  +    G + L  L+  +G  
Sbjct: 298 RTVVKRFHSEEAAAKAEEEFIRVFRHRELPSEIPEFPLPSELREGGPIPLFRLLFLSGLV 357

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            S +EARR +    +++N   I++ +  IK +       + L  GK+  +  
Sbjct: 358 PSLSEARRLISQGGVRVNEEKITDPQAPIKPR-----PGMVLRAGKRRFVRL 404


>gi|328715390|ref|XP_001944544.2| PREDICTED: probable tyrosyl-tRNA synthetase, mitochondrial-like
           [Acyrthosiphon pisum]
          Length = 469

 Score =  383 bits (985), Expect = e-104,   Method: Composition-based stats.
 Identities = 138/433 (31%), Positives = 211/433 (48%), Gaps = 26/433 (6%)

Query: 7   DFLSILSERGFIHQISNPR---ELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           + L  L ER  I  +       E+  L ++     Y G+D TA SLH G+L  ++ L   
Sbjct: 36  NVLK-LYERQIIQNMFPDNSSNEIIDLLTKRNQCVYAGFDPTADSLHIGNLLVIINLLHW 94

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSS--------FIK 115
           Q+  HK I+L+GG T+ IGDPS + + R    SQ +  NI+ I     S        F K
Sbjct: 95  QRANHKVIALIGGATAQIGDPSGKSKDRDKQSSQMLSHNIKGITHSLQSIFDNHAKYFWK 154

Query: 116 YGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFN 175
                 + +++NN  W   I  ID +  IG  F +  MLS +SV+SRL     +SF EF 
Sbjct: 155 QKDPLPEPIIINNMEWYKGIGVIDFMNNIGRHFRMGTMLSRDSVKSRL-SGSGMSFTEFT 213

Query: 176 YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT 235
           Y   QAYD++ L KNY C  Q+GG+DQ GNI+ G +L  R +  K++ LT PL+TT SG 
Sbjct: 214 YQTFQAYDWLHLFKNYKCLFQIGGNDQMGNIMSGQELISRQENAKVYGLTVPLITTDSGD 273

Query: 236 KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI 295
           K GK+   AIWLN + TSP+  +Q+     DADV    K  T L + EI  + +      
Sbjct: 274 KYGKSAQNAIWLNSDRTSPFELYQFMIRTIDADVEKLLKMFTFLSLPEIAELMRRHKATP 333

Query: 296 --NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI----------SISK 343
                 + +A ++TT+VHG E  ++A  A    +D SI +    ++          ++ +
Sbjct: 334 DKRIPHESLARQVTTLVHGEEGLKEAIVATSALYDNSIETLSTLSVNDILKIFNGATVVE 393

Query: 344 DEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ-DFDSTGNI 402
             +  G+ +L + + A    +  +A R + +    IN+  I+N    + L          
Sbjct: 394 LMLEPGITVLKMAMNAKCFLTDKDAYRIISAGGFYINHQRITNIDEIVTLSVHILPNNIS 453

Query: 403 KLSFGKKNHIICH 415
            +  GK+N+ I  
Sbjct: 454 LVRVGKRNYWIVK 466


>gi|296211473|ref|XP_002752425.1| PREDICTED: tyrosyl-tRNA synthetase, mitochondrial [Callithrix
           jacchus]
          Length = 477

 Score =  383 bits (984), Expect = e-104,   Method: Composition-based stats.
 Identities = 139/431 (32%), Positives = 207/431 (48%), Gaps = 28/431 (6%)

Query: 13  SERGFIHQISNPR----ELDILCSQG----VVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
             RG        R    EL  L ++G      T Y G+D TA SLH GHL  L+ LF LQ
Sbjct: 43  KARGLFKDFFPERGTKIELPELFNRGTASFPQTIYCGFDPTADSLHVGHLLALLGLFHLQ 102

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI-------EKIKGIFSSFIKYG 117
           + GH  I+L+GG T+ +GDPS R + R  +  + +Q N        E +          G
Sbjct: 103 RAGHNVIALVGGATARLGDPSGRTKEREALEKESVQANARALRLELEALAANHQQLFSDG 162

Query: 118 TGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYM 177
                  +L+N  W      +D L  +G  F +  +LS +SV+ RLK  + +S  EF Y 
Sbjct: 163 RPWGSFTVLDNSAWYQKQHLVDFLAAVGGHFRMGTLLSRQSVQMRLKSPEGMSLAEFFYQ 222

Query: 178 ILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
           +LQAYDF  L + Y CR+Q+GGSDQ GNI+ G +   +L    +F +T PL+T+ +G K+
Sbjct: 223 VLQAYDFYYLFQRYGCRVQLGGSDQLGNIMSGYEFIHKLTGEDVFGITVPLITSTTGAKL 282

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI-- 295
           GK+   A+WLN++ TSP+  +Q++    D  V  + K  T LP+ EID +  L  KE   
Sbjct: 283 GKSAGNAVWLNRDKTSPFELYQFFVRQPDDSVERYLKLFTFLPLPEIDHIMHLHVKEPER 342

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS-QHMPTISI---------SKDE 345
              +K +A E+T +VHGRE  + A       +  SI + + M    +         S+  
Sbjct: 343 RGPQKRLAAEVTKLVHGREGLDSAKRCTQALYHSSIDALEDMSDQELKELFKEAPFSELV 402

Query: 346 VSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEK-LQIKLQDFDSTGNIKL 404
           +  G  +L    KA          R +    + IN+  ++N + + I  Q     G   L
Sbjct: 403 LDPGTSVLDTCRKANAIPDGPRGYRMITEGGVSINHQQVTNPESVLIVGQHILKNGLSLL 462

Query: 405 SFGKKNHIICH 415
             GK+N  I  
Sbjct: 463 KIGKRNFYIIK 473


>gi|91789945|ref|YP_550897.1| tyrosyl-tRNA synthetase [Polaromonas sp. JS666]
 gi|91699170|gb|ABE45999.1| tyrosyl-tRNA synthetase [Polaromonas sp. JS666]
          Length = 414

 Score =  383 bits (984), Expect = e-104,   Method: Composition-based stats.
 Identities = 103/410 (25%), Positives = 179/410 (43%), Gaps = 26/410 (6%)

Query: 15  RGFIHQISNPRELDILCSQG----VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           RG    I     +  L         +   +G D TA  +H GH   L  +  LQ  GH  
Sbjct: 24  RGCDELIPQDEWVKKLVRSESTGVPLRIKLGLDPTAPDIHVGHTVVLNKMRQLQDLGHSV 83

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           I L+G  T++IGDPS R+ +R  +  ++I+ N +      S  +     +    +  N  
Sbjct: 84  IFLIGDFTTMIGDPSGRNSTRPPLTREQIEVNAQTYYRQASLVLDPARTE----IRYNSE 139

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           W   +    ++ ++ S ++V RM+       R K  QS+S  EF Y ++Q YD V L  +
Sbjct: 140 WSDPLGARGMI-QLASRYTVARMMERNDFHDRFKAGQSISVHEFLYPLMQGYDSVALKSD 198

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNK 249
               L++GG+DQ  N++ G  L           LT PLL    G  KM K+ +  I +++
Sbjct: 199 ----LELGGTDQKFNLLMGRHLQVEYGQDPQCVLTMPLLEGLDGIEKMSKSKNNYIGISE 254

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEIT 307
           +  +    +    +I D  +  +   L+    +EI   R   L G+   +AK  +A EIT
Sbjct: 255 DANT---MFAKVLSISDVLMWRWYTLLSFRSEAEIAALRAEVLAGRNPKDAKVALAKEIT 311

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
              H    A+ A    +           +P ++++  E    +G+  L+ +AG A S +E
Sbjct: 312 ARFHSAAAADAAEQDFINR-SKGGVPDEIPEVALTLAEGGAPLGIGALLRQAGLAPSGSE 370

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           A R +    +++++S++S++ L++        G   L  GK+      L 
Sbjct: 371 ANRLIDGGGVRVDSSVVSDKALKL------GAGTYVLQVGKRKFARVTLT 414


>gi|319795927|ref|YP_004157567.1| tyrosyL-tRNA synthetase [Variovorax paradoxus EPS]
 gi|315598390|gb|ADU39456.1| tyrosyl-tRNA synthetase [Variovorax paradoxus EPS]
          Length = 402

 Score =  383 bits (984), Expect = e-104,   Method: Composition-based stats.
 Identities = 98/414 (23%), Positives = 179/414 (43%), Gaps = 30/414 (7%)

Query: 11  ILSERGFIHQISNPRELDILCSQG----VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
            +S RG    +     +  L         +   +G D TA  +H GH   L  +  LQ  
Sbjct: 12  EISLRGADELLPQDEWVRKLQRSEATGTPLRIKLGLDPTAPDIHIGHTVVLNKMRQLQDL 71

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+ I L+G  TS IGDPS R+ +R  +  ++I+ N +      S  +     +    + 
Sbjct: 72  GHRVIFLIGDFTSTIGDPSGRNNTRPPLTREQIEANAQTYYKQASLVLDPEKTE----IR 127

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
            N  W   +    ++ ++ + ++V RM+  +    R K  QS+S  EF Y ++Q YD V 
Sbjct: 128 YNSEWSDPLGARGMI-QLAAKYTVARMMERDDFNKRFKAGQSISVHEFLYPLMQGYDSVA 186

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAI 245
           L  +    L++GG+DQ  N++ G  L +         LT PLL    G  KM K+    I
Sbjct: 187 LKSD----LELGGTDQKFNLLVGRHLQQEYGQEPQCILTMPLLEGLDGVEKMSKSKHNYI 242

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIA 303
            ++++  +    +    +I D  +  +   L+   + +I+ +      G+   +AK  +A
Sbjct: 243 GISEDANT---MFAKVLSISDDLMWRWYTLLSFQSLEQIEALKAEIAGGRNPKDAKVALA 299

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
            EIT   H    AE A    +           +P +S+S       +G+  L+ +A  A+
Sbjct: 300 KEITARFHSAAAAETAEQDFVNR-SKGGVPDEIPEVSLS----GAPLGIGQLLKQANLAS 354

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           S  +  R +    +++++ +IS++ L++        G+  +  GK+      L 
Sbjct: 355 SAGDGNRLIDGGGVRVDSVVISDKGLKLPA------GSYVVQVGKRKFARVTLS 402


>gi|297170760|gb|ADI21782.1| tyrosyl-tRNA synthetase [uncultured gamma proteobacterium
           HF0130_22O14]
          Length = 404

 Score =  383 bits (984), Expect = e-104,   Method: Composition-based stats.
 Identities = 105/422 (24%), Positives = 192/422 (45%), Gaps = 25/422 (5%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M + K   L I  +RG    +     L+ L     +   +G+D TA  LH GH   +  +
Sbjct: 1   MTSNKEQILEI--KRGVDEILVEKDFLEKLKKNKPLKIKVGFDPTAPDLHLGHTVIINKM 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+ I L+G  T +IGDPS  +E+R ++  ++++EN    K      +     +
Sbjct: 59  RQFQEFGHEVIFLIGDYTGMIGDPSGVNETRPVLTVEQVKENARTYKNQIFKILDKDKTR 118

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
            +     N +W+  +   +L+ +I S ++V RML  +  + R K E  +S  EF Y ++Q
Sbjct: 119 IEL----NSSWMNKVTSSELI-DIASKYTVARMLERDDFKKRFKSENPISIHEFIYPLVQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGK 239
            YD V L    +C ++MGG+DQ  N++ G  L +         +T PLL    G  KM K
Sbjct: 174 GYDSVAL----ECDVEMGGTDQKFNLLVGRHLQQLYGQEPQTIITLPLLEGLDGVKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINE 297
           +    + LN       + +    ++ D  +  + + +++  ++EI   + +   G    +
Sbjct: 230 SADNYVALNDSGD---DMFGKIMSVSDDLMWRYFELVSSKNLTEIKNLKNSVNDGANPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG---MGLLT 354
            K ++A EI    H +  A+KA  + M+ F      + +  I +S  ++        L  
Sbjct: 287 IKFLLAEEIVERFHNQSVAKKAKESFMQRFQKGGIPEDIDLIEVSIKDIQNDDGETNLPR 346

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           L+       S +E  R +K+ +++I+   IS   L+I+ +       + LS GK+  I  
Sbjct: 347 LLAHTNLVNSISEGHRAIKAGSVRIDGEKISQISLEIQTK-----SELILSQGKRRFIKV 401

Query: 415 HL 416
            +
Sbjct: 402 KI 403


>gi|297171886|gb|ADI22874.1| tyrosyl-tRNA synthetase [uncultured gamma proteobacterium
           HF0500_32L01]
          Length = 392

 Score =  383 bits (984), Expect = e-104,   Method: Composition-based stats.
 Identities = 97/405 (23%), Positives = 175/405 (43%), Gaps = 22/405 (5%)

Query: 15  RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLM 74
           RG    I +   +  L     +   +G+D TA  LH GH   +  +   Q  GH+ I L+
Sbjct: 6   RGVEEIIPDEELIARLRGDRPLRVKVGFDPTAPDLHLGHTVVVNKMRQFQDFGHEIIFLI 65

Query: 75  GGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCS 134
           G  T +IGDPS +  +R  +   EI++N    +      +          +  N  W   
Sbjct: 66  GDFTGMIGDPSGKSTTRPPLSRDEIEQNAVTYREQVFKILD----PKKTRIEFNSVWGNE 121

Query: 135 IKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCR 194
           +    L+R + + ++V R+L  +   +R +  + ++  EF Y ++Q YD V L       
Sbjct: 122 LGAEGLIR-LAARYTVARILERDDFSTRYRNGEPIAIHEFLYPLMQGYDSVALK----VD 176

Query: 195 LQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTS 253
           +++GG+DQ  N++ G +L ++   P    LT PLL    G  KM K+L   + + +   S
Sbjct: 177 VELGGTDQKFNLLVGRELQKQYGQPPQIVLTMPLLEGLDGVRKMSKSLDNYVGITE---S 233

Query: 254 PYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEITTMVH 311
           P   +    +I D  +  +   L+   ++E++  +M  ++G    + K I+A EI    H
Sbjct: 234 PDEMFGKLMSISDDLMWRYFDLLSLRNVTELEQLKMDAVEGVNPRDIKYILAGEIVERFH 293

Query: 312 GREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRH 371
              +A +A    +  F        +    ++       M + T+I  AG   ST+EA R 
Sbjct: 294 SASDARRAKEEFVNRFQKGEMPARIVEKVVNSR--GEEMPIATVIKVAGLVASTSEALRM 351

Query: 372 LKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           LK  A++I+   +++   +I + D           GK       +
Sbjct: 352 LKQGAVRIDGERVTDRDRKIGVGDAG-----IFQVGKHRFARIRV 391


>gi|319942888|ref|ZP_08017171.1| tyrosine--tRNA ligase [Lautropia mirabilis ATCC 51599]
 gi|319743430|gb|EFV95834.1| tyrosine--tRNA ligase [Lautropia mirabilis ATCC 51599]
          Length = 406

 Score =  383 bits (984), Expect = e-104,   Method: Composition-based stats.
 Identities = 103/417 (24%), Positives = 179/417 (42%), Gaps = 31/417 (7%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
            K     +L E     ++        L     +   +G D TA  LH GH   L  +  L
Sbjct: 18  IKRGIDELLVETELAAKL-----RRSLKENRPLRIKLGLDPTAPDLHLGHTVVLNKMRQL 72

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q  GH+ I L+G  T+ IGDPS R+ +R  +  ++I++N +      S  +     +   
Sbjct: 73  QDLGHQVIFLIGDFTASIGDPSGRNSTRPPLTREQIEQNAQTYFRQASLVLDPERTE--- 129

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            +  N  W   I   D++ ++ S ++V R+L  +    RLK    +S  E  Y +LQ YD
Sbjct: 130 -IRYNSAWCDKIGLRDMV-QLASRYTVARILERDDFTKRLKAGVPISVHEMLYPLLQGYD 187

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLS 242
            V L    +  L++GG+DQ  N++ G +L           LT PLL    G  KM K+  
Sbjct: 188 SVVL----EADLELGGTDQKFNLLVGRELQREYGKEPQCVLTMPLLEGLDGVEKMSKSKG 243

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKK 300
             + + +   +    +    +I DA +  +   L+  PMSEID  R     G+   EAK 
Sbjct: 244 NYVGITEPANT---MFAKVMSISDAMMWRYFTLLSFRPMSEIDALRAECEAGRNPKEAKV 300

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           ++A E+    HG   ++ A     E          +  +++S       +G++ ++  +G
Sbjct: 301 LLARELVERFHGAGSSDAAVEDF-ELRARGGVPDEIEEVTLS----GAPLGIVAVLRDSG 355

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
              S +EA R L  N ++++ S++++  L +        G   +  GK+      + 
Sbjct: 356 LVPSASEAGRMLAQNGVRVDGSVVTDRGLTLPA------GTYVVQVGKRKFRRVTVA 406


>gi|153217135|ref|ZP_01950899.1| tyrosyl-tRNA synthetase [Vibrio cholerae 1587]
 gi|124113828|gb|EAY32648.1| tyrosyl-tRNA synthetase [Vibrio cholerae 1587]
          Length = 395

 Score =  383 bits (984), Expect = e-104,   Method: Composition-based stats.
 Identities = 98/419 (23%), Positives = 177/419 (42%), Gaps = 28/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M + ++    I  +RG    I     +  L     +   +G D TA  +H GH   L  L
Sbjct: 1   MASIEAALAEI--KRGVEELIPEEELIAKLKENRPLRIKLGADPTAPDIHLGHTVILNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GH    L+G  T ++GDP+ ++ +R  +  +++  N E  K      ++    K
Sbjct: 59  RTFQDLGHDVTFLIGDFTGMVGDPTGKNTTRPPLTREDVLRNAETYKQQVFKILEPAKTK 118

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N  WL  +    ++R + S  +V RML  +  + R    Q ++  EF Y +LQ
Sbjct: 119 ----IQFNSEWLSQLGAEGMIR-LASNQTVARMLERDDFKKRYNNGQPIAIHEFMYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGK 239
            YD V +    +  +++GG+DQ  N++ G +L +         L  PLL    G  KM K
Sbjct: 174 GYDSVAM----ETDVELGGTDQKFNLLMGRELQKANGQKPQVVLMMPLLVGLDGEKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINE 297
           +    I +++   +P   +    +I D  + S+ + L+  P+ E+ +       G    +
Sbjct: 230 SAHNYIGVSE---APSEMFGKIMSISDDLMWSYYELLSFRPLEEVAQFKAEVANGANPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A EI    H + +A+ A    +  F      + M      + E   G+ +  L+ 
Sbjct: 287 IKILLAKEIIARFHSQADADAAEQEFINRFQKGAMPEEM-----PEFEFESGIAISNLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +AG   ST++A R +K  A+K++   + + KL          G      GK+      +
Sbjct: 342 EAGLVASTSDALRMIKQGAVKLDGEKLEDAKLIPAC------GTSVYQVGKRKFARVTI 394


>gi|52840810|ref|YP_094609.1| tyrosyl-tRNA synthetase [Legionella pneumophila subsp. pneumophila
           str. Philadelphia 1]
 gi|52627921|gb|AAU26662.1| tyrosyl tRNA synthetase [Legionella pneumophila subsp. pneumophila
           str. Philadelphia 1]
          Length = 423

 Score =  383 bits (983), Expect = e-104,   Method: Composition-based stats.
 Identities = 97/389 (24%), Positives = 177/389 (45%), Gaps = 24/389 (6%)

Query: 26  ELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDP 84
           EL+    +G  +    G+D TA  LH GH   L  L   Q+ GH+ I L+G  T++IGDP
Sbjct: 45  ELEKKLQKGIPLKIKAGFDPTAPDLHLGHTVLLNKLRQFQQFGHEVIFLIGDFTAMIGDP 104

Query: 85  SFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREI 144
           + ++ +R  +  + + EN +  +      +          +  N  WL     +DL+R  
Sbjct: 105 TGKNVTRMPLSQETVLENAKTYQHQVFKILDPDKT----TVAFNSQWLNKFNAVDLIRLA 160

Query: 145 GSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWG 204
            +  +V RML  +    R    Q ++  EF Y +LQ YD V L  +    +++GG+DQ  
Sbjct: 161 ATH-TVARMLERDDFNKRYTTGQPIAIHEFLYPLLQGYDSVALKAD----VELGGTDQKF 215

Query: 205 NIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
           N++ G +L +         + +PL+    G  KM K+L   I +N+   +P   +    +
Sbjct: 216 NLLMGRELQKHYGFEPQVVMMTPLIEGLDGVKKMSKSLDNYIGINE---TPEQMFGKIMS 272

Query: 264 IDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAAT 321
           + D  +  +   L+     EI ++ +  L+GK   + K   A EI    H + +AE A  
Sbjct: 273 VSDELMWRYIDLLSFKTGKEIQQLKQSVLEGKNPRDVKIDFAKEIVARFHDQTQAEFAHN 332

Query: 322 AAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINN 381
             +E F      + +  +S+    ++  + L  L+ +     ST+E+ R +K  A+K++ 
Sbjct: 333 KFIERFQKGNIPEDLEELSLV---IAEPIALAQLLKQIDLTASTSESIRMVKQGAVKVDG 389

Query: 382 SIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
             IS+  L++ +       +  +  GK+ 
Sbjct: 390 DKISDPSLKLPI-----GKSYIIQVGKRR 413


>gi|237746826|ref|ZP_04577306.1| tyrosyl-tRNA synthetase [Oxalobacter formigenes HOxBLS]
 gi|229378177|gb|EEO28268.1| tyrosyl-tRNA synthetase [Oxalobacter formigenes HOxBLS]
          Length = 415

 Score =  383 bits (983), Expect = e-104,   Method: Composition-based stats.
 Identities = 89/389 (22%), Positives = 170/389 (43%), Gaps = 26/389 (6%)

Query: 32  SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESR 91
           +   +   +G D TA  LH GH   L  +  LQ  GH  I L+G  TS+IGDPS R+ +R
Sbjct: 50  TGKPLRIKLGLDPTAPDLHLGHTVVLNKMRQLQDLGHVVIFLIGDFTSMIGDPSGRNVTR 109

Query: 92  RMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVN 151
             +  ++++EN        S  +     +    +  N  W   +    ++ ++ S +++ 
Sbjct: 110 PPLTREQVKENAMTYFSQASLVLDPERTE----IRYNSEWSDELGARGMI-QLASQYTLA 164

Query: 152 RMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGID 211
           R++  +    R +    +S  E  Y ++Q YD V L  +    +++GG+DQ  N++ G +
Sbjct: 165 RIMERDDFAKRFRNGNPISVHELLYPLMQGYDSVALKSD----MELGGTDQKFNLLVGRE 220

Query: 212 LGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVV 270
           L  +        LT PLL    G  KM K+    + + +        +    +I D  + 
Sbjct: 221 LQRQYGQEPQCILTMPLLEGLDGVEKMSKSKGNYVGITEPGNV---MFGKLMSISDEMMW 277

Query: 271 SFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFD 328
            +   L+   + EI+R+ +    G+   + K     EI T  H + +A+ A    M    
Sbjct: 278 RYYDLLSFRSIDEIERLKEEVRNGRNPRDVKVAFCQEIVTRFHSKADADAALEDFMAR-S 336

Query: 329 MSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEK 388
                  +P++S++       +G+  ++ +AG   ST+EA R +    +++++S +S+  
Sbjct: 337 RGGIPDDIPSVSLN----GAPLGIGQVLKQAGLCASTSEALRLVDQGGVRVDSSTVSDRG 392

Query: 389 LQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           L++        G   +  GK+      L 
Sbjct: 393 LKL------GAGTFVVQVGKRKFAKVTLS 415


>gi|145630984|ref|ZP_01786760.1| tyrosyl-tRNA synthetase [Haemophilus influenzae R3021]
 gi|144983451|gb|EDJ90927.1| tyrosyl-tRNA synthetase [Haemophilus influenzae R3021]
          Length = 385

 Score =  383 bits (983), Expect = e-104,   Method: Composition-based stats.
 Identities = 106/391 (27%), Positives = 176/391 (45%), Gaps = 22/391 (5%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M    +  L+ L  RG    +S    ++ L     +   +G D TA  +H GH   L  L
Sbjct: 1   MTDINT-VLAELK-RGTDEILSEADLIEKLKENRPLKVKLGADPTAPDIHLGHTVVLNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+   L+G  T ++GDPS ++ +R  +  +++  N E  K      +     K
Sbjct: 59  RQFQQLGHEVYFLIGDFTGMVGDPSGKNATRPPLSREDVLRNAETYKEQIYKILDPQKTK 118

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               ++ N  WL  +    ++R + S ++V RML  +  + R    Q ++  EF Y +LQ
Sbjct: 119 ----IVFNSEWLSKLGTEGMIR-LASNYTVARMLERDDFKKRFGNNQPIAIHEFIYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGK 239
            YD V L  +    +++GG+DQ  N++ G +L +        A+T PLL    G  KM K
Sbjct: 174 GYDSVALDAD----VELGGTDQKFNLLVGRELQKSAGKKPQVAITLPLLVGLDGEKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINE 297
           +L   I + +   +P + +    +I D  +  +   L+  P+SEI   +     GK   +
Sbjct: 230 SLGNYIGVTE---APSDMFGKVMSISDELMWDWYNLLSFRPLSEIAQLKSEVENGKNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A E+    H  E A  A    +  F        MP  + S +     +GL TL+ 
Sbjct: 287 VKILLAKELIARFHNEEAANAAEQEFINRFQKGAMPDEMPEFTFSGE-----IGLATLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEK 388
           +AG   ST+EA R  +   +KIN   + N K
Sbjct: 342 EAGLVPSTSEAIRSAQQGGVKINGEKVDNVK 372


>gi|313893604|ref|ZP_07827173.1| tyrosine--tRNA ligase [Veillonella sp. oral taxon 158 str. F0412]
 gi|313441875|gb|EFR60298.1| tyrosine--tRNA ligase [Veillonella sp. oral taxon 158 str. F0412]
          Length = 402

 Score =  383 bits (983), Expect = e-104,   Method: Composition-based stats.
 Identities = 99/408 (24%), Positives = 178/408 (43%), Gaps = 30/408 (7%)

Query: 18  IHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPIS 72
           +  + N ++L     +       +   +G D TA  +H GH   L  L   Q+ GH+ + 
Sbjct: 15  VADLINEQDLVKKIEKSIKENKPLVIKLGLDPTAPDIHLGHTVPLRKLRLFQEFGHQVVI 74

Query: 73  LMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL 132
           ++GG T+ IGDP+ +  +R  +  +E+ +N E  K      +         ++ +N  WL
Sbjct: 75  VIGGFTARIGDPTGKSVTRPPLTKEEVLKNAETYKTQIFKVLD----PEKTIVRDNSEWL 130

Query: 133 CSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYD 192
            S+ + D+LR + S ++V RM+  +    R K  + +   EF Y ++Q +D V L  +  
Sbjct: 131 ESMNFADVLR-LASSYTVARMMERDDFSKRFKEGRPIGVHEFMYPLMQGHDSVALQAD-- 187

Query: 193 CRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEM 251
             ++ GG+DQ  N++ G  L E         +T PLL    G  KM K+L   I +++E 
Sbjct: 188 --VEFGGTDQTFNLLMGRHLQELEGQEPQVVITMPLLEGLDGVQKMSKSLGNYIGIDEE- 244

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAKKIIATEITT 308
             P   +    +I D  ++ +   +T +P+ E + M K          +AK  +A  I  
Sbjct: 245 --PKEMYGKAMSIPDELMMRYFMLVTDMPIEEQEDMEKRLESGELHPRDAKMQLARTIVR 302

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
           + HG E A +A       F        +P  +++    +  + +      AG   S  EA
Sbjct: 303 LYHGEEAALEAEEEFKRVFQQRALPTDIPEYAMNAP--TEPIFVPQFCTDAGLTASNGEA 360

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           RR +K+ A K+N    + E L ++         + +  GK+  +    
Sbjct: 361 RRSIKAGAFKVNGEKYTEENLTLEEG-------MIVQVGKRKFVKIKF 401


>gi|297182117|gb|ADI18290.1| tyrosyl-tRNA synthetase [uncultured Chromatiales bacterium
           HF0200_41F04]
          Length = 398

 Score =  383 bits (983), Expect = e-104,   Method: Composition-based stats.
 Identities = 95/387 (24%), Positives = 177/387 (45%), Gaps = 22/387 (5%)

Query: 33  QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRR 92
           +  +    G+D TA  LH GH   +  +   Q  GH+ I L+G  T +IGDP+ ++ +R 
Sbjct: 28  KRPLRVKAGFDPTAPDLHLGHTVLINKMRQFQDIGHEIIFLIGDFTGMIGDPTGKNATRP 87

Query: 93  MMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNR 152
            +  +E++ N +         +     K    ++ N  W+  +   DL+  I S  +V R
Sbjct: 88  PLTPKEVKANAQTYTEQVFKILDPVKTK----VVFNSQWMGVMDPADLVG-IASKHTVAR 142

Query: 153 MLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL 212
           ML  +  + R    Q ++  EF Y ++Q YD V L    +  +++GG+DQ  N++ G  L
Sbjct: 143 MLERDDFQKRYAAGQPIAIHEFLYPLIQGYDSVAL----EADIELGGTDQKFNLLVGRQL 198

Query: 213 GERLKTPKLFALTSPLLTT-ASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVS 271
            +         LT PLL   + G KM K+L+  I + +  +     +    +I D  +  
Sbjct: 199 QQAYGQAPQVVLTMPLLEGISGGDKMSKSLNNYIGITEPAS---EMFGKLMSISDDLMWK 255

Query: 272 FAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDM 329
           + + +++  +  I+  R     G+   E K  +A EI    HG   A  A  A  + +  
Sbjct: 256 YFELVSSRSLRHIEKLRADTRAGRNPKEVKVELAVEIVGRFHGTASANMAFQAFDQRYVR 315

Query: 330 SIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKL 389
                 MP ++++    + G+ L  ++  AG  +ST+E+RR ++  A++I+ + I + + 
Sbjct: 316 GQLPDDMPEVTVAVG--TEGLPLANVLKVAGLTSSTSESRRMVEQGAVRIDGAKIDDARQ 373

Query: 390 QIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +IK+        + +  GK+      L
Sbjct: 374 RIKV-----GRPLVIQVGKRRIARVLL 395


>gi|307609371|emb|CBW98858.1| tyrosyl-tRNA synthetase [Legionella pneumophila 130b]
          Length = 401

 Score =  382 bits (982), Expect = e-104,   Method: Composition-based stats.
 Identities = 97/389 (24%), Positives = 177/389 (45%), Gaps = 24/389 (6%)

Query: 26  ELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDP 84
           EL+    +G  +    G+D TA  LH GH   L  L   Q+ GH+ I L+G  T++IGDP
Sbjct: 23  ELEKKLQKGIPLKIKAGFDPTAPDLHLGHTVLLNKLRQFQQFGHEVIFLIGDFTAMIGDP 82

Query: 85  SFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREI 144
           + ++ +R  +  + + EN +  +      +          +  N  WL     +DL+R  
Sbjct: 83  TGKNVTRMPLSQETVLENAKTYQHQVFKILDPDKT----TVAFNSQWLNKFNAVDLIRLA 138

Query: 145 GSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWG 204
            +  +V RML  +    R    Q ++  EF Y +LQ YD V L  +    +++GG+DQ  
Sbjct: 139 ATH-TVARMLERDDFNKRYTTGQPIAIHEFLYPLLQGYDSVALKAD----VELGGTDQKF 193

Query: 205 NIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
           N++ G +L +         + +PL+    G  KM K+L   I +N+   +P   +    +
Sbjct: 194 NLLMGRELQKHYGFEPQVVMMTPLIEGLDGVKKMSKSLDNYIGINE---TPEQMFGKIMS 250

Query: 264 IDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAAT 321
           + D  +  +   L+     EI ++ +  L+GK   + K   A EI    H + +AE A  
Sbjct: 251 VSDELMWRYIDLLSFKTGKEIQQLKQSVLEGKNPRDVKIDFAKEIVARFHDQTQAEFAHN 310

Query: 322 AAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINN 381
             +E F      + +  +S+    ++  + L  L+ +     ST+E+ R +K  A+K++ 
Sbjct: 311 KFIERFQKGNIPEDLEELSLV---IAEPIALAQLLKQIDLTASTSESIRMVKQGAVKVDG 367

Query: 382 SIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
             IS+  L++ +       +  +  GK+ 
Sbjct: 368 DKISDPSLKLPI-----GKSYIIQVGKRR 391


>gi|115305808|sp|Q5ZY07|SYY_LEGPH RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
          Length = 401

 Score =  382 bits (982), Expect = e-104,   Method: Composition-based stats.
 Identities = 97/389 (24%), Positives = 177/389 (45%), Gaps = 24/389 (6%)

Query: 26  ELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDP 84
           EL+    +G  +    G+D TA  LH GH   L  L   Q+ GH+ I L+G  T++IGDP
Sbjct: 23  ELEKKLQKGIPLKIKAGFDPTAPDLHLGHTVLLNKLRQFQQFGHEVIFLIGDFTAMIGDP 82

Query: 85  SFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREI 144
           + ++ +R  +  + + EN +  +      +          +  N  WL     +DL+R  
Sbjct: 83  TGKNVTRMPLSQETVLENAKTYQHQVFKILDPDKT----TVAFNSQWLNKFNAVDLIRLA 138

Query: 145 GSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWG 204
            +  +V RML  +    R    Q ++  EF Y +LQ YD V L  +    +++GG+DQ  
Sbjct: 139 ATH-TVARMLERDDFNKRYTTGQPIAIHEFLYPLLQGYDSVALKAD----VELGGTDQKF 193

Query: 205 NIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
           N++ G +L +         + +PL+    G  KM K+L   I +N+   +P   +    +
Sbjct: 194 NLLMGRELQKHYGFEPQVVMMTPLIEGLDGVKKMSKSLDNYIGINE---TPEQMFGKIMS 250

Query: 264 IDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAAT 321
           + D  +  +   L+     EI ++ +  L+GK   + K   A EI    H + +AE A  
Sbjct: 251 VSDELMWRYIDLLSFKTGKEIQQLKQSVLEGKNPRDVKIDFAKEIVARFHDQTQAEFAHN 310

Query: 322 AAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINN 381
             +E F      + +  +S+    ++  + L  L+ +     ST+E+ R +K  A+K++ 
Sbjct: 311 KFIERFQKGNIPEDLEELSLV---IAEPIALAQLLKQIDLTASTSESIRMVKQGAVKVDG 367

Query: 382 SIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
             IS+  L++ +       +  +  GK+ 
Sbjct: 368 DKISDPSLKLPI-----GKSYIIQVGKRR 391


>gi|148360777|ref|YP_001251984.1| tyrosyl tRNA synthetase [Legionella pneumophila str. Corby]
 gi|296106156|ref|YP_003617856.1| tyrosyl-tRNA synthetase [Legionella pneumophila 2300/99 Alcoy]
 gi|148282550|gb|ABQ56638.1| tyrosyl tRNA synthetase [Legionella pneumophila str. Corby]
 gi|295648057|gb|ADG23904.1| tyrosyl-tRNA synthetase [Legionella pneumophila 2300/99 Alcoy]
          Length = 401

 Score =  382 bits (982), Expect = e-104,   Method: Composition-based stats.
 Identities = 97/389 (24%), Positives = 178/389 (45%), Gaps = 24/389 (6%)

Query: 26  ELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDP 84
           EL+    +G  +    G+D TA  LH GH   L  L   Q+ GH+ I L+G  T++IGDP
Sbjct: 23  ELEKKLQKGIPLKIKAGFDPTAPDLHLGHTVLLNKLRQFQQFGHEVIFLIGDFTAMIGDP 82

Query: 85  SFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREI 144
           + ++ +R  +  + + EN +  +      +          +  N  WL     +DL+R  
Sbjct: 83  TGKNVTRMPLSQETVLENAKTYQHQVFKILDPDKT----TVAFNSQWLNKFDAVDLIRLA 138

Query: 145 GSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWG 204
            +  +V RML  +    R    Q ++  EF Y +LQ YD V L  +    +++GG+DQ  
Sbjct: 139 ATH-TVARMLERDDFNKRYTTGQPIAIHEFLYPLLQGYDSVALKAD----VELGGTDQKF 193

Query: 205 NIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
           N++ G +L +         + +PL+    G  KM K+L   I +N+   +P   +    +
Sbjct: 194 NLLMGRELQKHYGFEPQVVMMTPLIEGLDGVKKMSKSLDNYIGINE---TPEQMFGKIMS 250

Query: 264 IDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAAT 321
           + D  +  +   L+     EI ++ +  L+GK   + K   A EI    H + +AE A  
Sbjct: 251 VSDELMWRYIDLLSFKTGKEIQQLKQSVLEGKNPRDVKIDFAKEIVARFHDQTQAEFAHN 310

Query: 322 AAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINN 381
             +E F      + +  +S+    ++  + L+ L+ +     ST+E+ R +K  A+K++ 
Sbjct: 311 KFIERFQKGNIPEDLEELSLV---IAEPIALVQLLKQIDLTASTSESIRMVKQGAVKVDG 367

Query: 382 SIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
             IS+  L++ +       +  +  GK+ 
Sbjct: 368 DKISDPSLKLPI-----GKSYIIQVGKRR 391


>gi|148545721|ref|YP_001265823.1| tyrosyl-tRNA synthetase [Pseudomonas putida F1]
 gi|148509779|gb|ABQ76639.1| tyrosyl-tRNA synthetase [Pseudomonas putida F1]
          Length = 399

 Score =  382 bits (982), Expect = e-104,   Method: Composition-based stats.
 Identities = 100/408 (24%), Positives = 175/408 (42%), Gaps = 24/408 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG    +     ++ L     +    G+D TA  LH GH   +  L   Q  GH+ I
Sbjct: 10  LIKRGAEEVLVESELVEKLKRGQPLRIKAGFDPTAPDLHLGHTVLINKLRQFQDLGHQVI 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T +IGDPS +  +R  +  +++ EN E  K      +     +    +  N TW
Sbjct: 70  FLIGDFTGMIGDPSGKSATRPPLTREQVLENAETYKQQVFKILDPAKTE----VAFNSTW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +  +   D +R + S ++V RML  +    R    Q ++  EF Y ++Q YD V L  + 
Sbjct: 126 MDKLTPADFIR-LASQYTVARMLERDDFDKRYTTNQPIAIHEFLYPLVQGYDSVALKAD- 183

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G +L           +T PLL    G  KM K+L   + + + 
Sbjct: 184 ---VELGGTDQKFNLLMGRELQRSYGQEAQNIVTMPLLEGLDGVKKMSKSLGNYVGIQE- 239

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATEITT 308
             +P   +    +I D  +  + + L+   M EI++       G    + K  +A EI  
Sbjct: 240 --APGVMYSKLVSIPDTLMWRYFELLSFRSMEEIEQFRADVANGANPRDIKIKLAEEIVA 297

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
             HG E A  A  AA          + +P I ++  E    + +  ++ +AG   ++ +A
Sbjct: 298 RFHGEEAAANAHRAAGNRMKEGELPEDLPEIEVAAAE---DLPIAAVLNRAGLVKNSAQA 354

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           R  L   A+K++ +++ ++        F          GKK+     L
Sbjct: 355 RDLLSGGAVKVDGAVV-DKDFM-----FVLGATHVCQAGKKSFGRVTL 396


>gi|308069708|ref|YP_003871313.1| Tyrosyl-tRNA synthetase 2 (Tyrosine--tRNA ligase) (TyrRS 2)
           [Paenibacillus polymyxa E681]
 gi|305858987|gb|ADM70775.1| Tyrosyl-tRNA synthetase 2 (Tyrosine--tRNA ligase) (TyrRS 2)
           [Paenibacillus polymyxa E681]
          Length = 417

 Score =  382 bits (982), Expect = e-104,   Method: Composition-based stats.
 Identities = 96/416 (23%), Positives = 180/416 (43%), Gaps = 28/416 (6%)

Query: 11  ILSERGFIHQISNPRELDILC-----SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
            + +RG + +I    EL         S   +   +G D +A  +H GH   +  L   Q+
Sbjct: 19  EVIQRG-VAEIVPEDELKRKVIKSVVSGEPLKIKLGLDPSAPDIHIGHTVVMHKLRQFQE 77

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+   ++G  T  IGDP+ + E+R+ +  +++Q N +  K      +     K    +
Sbjct: 78  LGHQVQLIIGDFTGRIGDPTGKSETRKQLTEEDVQRNAQTYKEQIFKILDPEKTK----V 133

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
             N  WL  + + D++  + +  +V RML  +    R +    +S  EF Y ++Q  D V
Sbjct: 134 FYNSEWLGPMSFADVV-TLSAKVTVARMLERDDFTKRYQNGLPISIHEFFYPLMQGMDSV 192

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGA 244
            L  +    +++GG+DQ  N++ G  L +         +T PLL    G  KM K+L   
Sbjct: 193 ALQSD----IELGGTDQKFNLLMGRTLQKEYGVEPQATITLPLLEGLDGVQKMSKSLGNY 248

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKI 301
           I +++E   P   +    ++ D  ++ + +  T +   E+  +A   K       +AK  
Sbjct: 249 IGVDEE---PNEIYGKSMSVPDELMLKYFELATDINNEELAELAKGVKDGSVHPRDAKMK 305

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSR-GMGLLTLIVKAG 360
           +A  +  M HG E  E A    +  F        +   +++ D++   G+ ++ L+   G
Sbjct: 306 LAGTLVRMYHGEEAEEAAKQHFVTVFQQRALPDDIEEFTLTADQLEEGGIRVIQLLTHLG 365

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           FA S  EA+R ++  ++KIN    ++       ++ D      +  GK+      L
Sbjct: 366 FAASNGEAKRSIQQGSVKINEEKWTDVNEAYTPKEGD-----IVQVGKRKFAKIKL 416


>gi|295698352|ref|YP_003603007.1| tyrosyl-tRNA synthetase [Candidatus Riesia pediculicola USDA]
 gi|291157035|gb|ADD79480.1| tyrosyl-tRNA synthetase [Candidatus Riesia pediculicola USDA]
          Length = 427

 Score =  382 bits (982), Expect = e-104,   Method: Composition-based stats.
 Identities = 139/431 (32%), Positives = 224/431 (51%), Gaps = 27/431 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M   K + + I  E   I Q+ + ++L     +  +T Y G+D T+ SLH GHL  L LL
Sbjct: 1   MKHEKRNLIKIFKELKLIDQLIHEKKLVQTILKKNITLYCGFDPTSDSLHVGHLIPLFLL 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GHKPI L+GG TS+IGDPSFRD  R + +  +I+    KI      F      K
Sbjct: 61  KTFQNFGHKPIILVGGATSLIGDPSFRDSERSINQVDQIESWTRKIYNQIGIFFDSNHKK 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
             A+++NN  W   +K ID L  +G  FS+  ML  E ++++L+  Q +SF EF+Y +LQ
Sbjct: 121 NKAIIVNNIEWFERMKIIDFLTTVGRNFSIKNMLRKELIKNKLENRQGISFSEFSYSLLQ 180

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           AYDF +L  +Y   LQ+GGSDQW NII GI+L ++L   ++F LT  L+T + G K GKT
Sbjct: 181 AYDFYKLYTDYHASLQIGGSDQWSNIIVGIELIKKLSRKEVFGLTFSLITNSIGRKFGKT 240

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRL-----TTLPMSEIDRMAKLQGKEI 295
               IWL+ + TSPY F+Q+W N+DD +   F   L     T +   E+ +         
Sbjct: 241 EKNNIWLDPKKTSPYCFYQFWINLDDRNAQMFFYLLLMSNSTLIHNLEMKKY-------P 293

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFD------------MSIHSQHMPTISISK 343
            + +  +A ++T ++HG+  ++ A   + + F+             +     +P I I  
Sbjct: 294 KKIQYFLAKKVTEIIHGKYLSDMAHDISKKIFEYQKISQFKEEDFRNFLKLGVPKIEI-- 351

Query: 344 DEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
            ++SR   +  ++VK+    S ++AR  +++++I +N     +++      +        
Sbjct: 352 -DLSRRYDIQEILVKSKLLDSKSQARNMIENHSISVNFHPCEDKRFIFSENEQIFQRYSI 410

Query: 404 LSFGKKNHIIC 414
           +  GKK+ I+ 
Sbjct: 411 VRKGKKDFILI 421


>gi|119486140|ref|ZP_01620200.1| tyrosyl-tRNA synthetase [Lyngbya sp. PCC 8106]
 gi|119456631|gb|EAW37760.1| tyrosyl-tRNA synthetase [Lyngbya sp. PCC 8106]
          Length = 416

 Score =  382 bits (982), Expect = e-104,   Method: Composition-based stats.
 Identities = 100/422 (23%), Positives = 187/422 (44%), Gaps = 28/422 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQ--GVVTAYIGYDLTASSLHAGHLTQLM 58
           M   +     I  E+  +   S     +   +Q    +    G D T + +H GH   + 
Sbjct: 19  MTKLRRGVSEIFPEQ--LDSESPDDNFNQRLAQSDQPLRVKFGIDPTGTDIHLGHSVVVR 76

Query: 59  LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT 118
            L   Q  GH  + ++G  T+ IGDP+ + E R+ + ++++Q+N +         + + T
Sbjct: 77  KLRDFQDAGHTAVLIIGDFTARIGDPTGKSEVRKQLTTEQVQQNAQTYLDQVRPILDFDT 136

Query: 119 GKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMI 178
                 +  N  WL ++    +L ++ S  +V +ML+ E    R ++E  +   EF Y +
Sbjct: 137 P-GRLEIRYNSEWLSTLDLAKIL-DLLSTMTVGQMLAKEGFALRYEKEAPIYLHEFLYPL 194

Query: 179 LQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKM 237
           +Q YD V +    +  +++GG+DQ  N+  G DL    +    F L  P+L    G  KM
Sbjct: 195 MQGYDSVAV----EADIELGGTDQKFNLAVGRDLQRYFQQKPQFGLLMPILIGTDGVQKM 250

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE 297
            K+L   + L+++  +    +     I D  +V + + LT LP+ E+            E
Sbjct: 251 SKSLGNYVGLSEDALT---MYSKLEKIPDDLIVQYFELLTKLPLDELPE-------NPRE 300

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSI-HSQHMPTISISKDEVSRGMGLLTLI 356
            +K++A ++ +  HG+E A +A  AA+     +   +  +P  S++  EV     L  ++
Sbjct: 301 RQKLLALDVVSQYHGKEAALEAQKAAINLTGGNTKQADAVPEFSLA--EVEFPAKLFYIL 358

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             +G   S +EARR ++   ++++   I++  L     D  +     L  GKK      L
Sbjct: 359 SASGLCKSGSEARRQMQGGGVRLDGEQITDANLIFDSIDDLNGR--VLQVGKKKF--VRL 414

Query: 417 CG 418
            G
Sbjct: 415 VG 416


>gi|27262156|gb|AAN87359.1| Tyrosyl-tRNA synthetase [Heliobacillus mobilis]
          Length = 420

 Score =  382 bits (982), Expect = e-104,   Method: Composition-based stats.
 Identities = 106/412 (25%), Positives = 186/412 (45%), Gaps = 26/412 (6%)

Query: 12  LSERGFIHQISNPRELDIL----CSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           L  RG    +     +  L      +  +   +G D TA  +H GH   L  L   Q  G
Sbjct: 21  LLRRGTAEIVPEEELVKKLERSIVEKRPLRVKLGLDPTAPDIHLGHTVVLQKLRHFQDLG 80

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+ + ++G  T  +GDPS + E+R+ +  +E+  N E  K      +     +    +  
Sbjct: 81  HQVVIVIGDFTGRVGDPSGKSETRKQLTEEEVNRNAETYKTQIFKVLDPEKTE----VTF 136

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N +WL  + + D+L ++ + ++V RML  E    R++  + +   E  Y ++Q YD V L
Sbjct: 137 NASWLQPLNFADIL-QLAAKYTVARMLEREDFTKRMQENRPIGMHELFYPLMQGYDSVAL 195

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIW 246
             +    +++GG+DQ  N++ G  L +        AL  P+L    G  KM K+L   I 
Sbjct: 196 KAD----VELGGTDQKFNLLVGRVLQKEYGQEPQVALMMPILEGLDGVHKMSKSLGNYIG 251

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKIIA 303
           +N+   SP   +    +I D  +V + + +T +P  EI  +A   K       + K  + 
Sbjct: 252 INE---SPREMFGKTMSIADELMVRYFELVTRIPSEEIAAIASGLKEGSLHPRDIKMRLG 308

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFA 362
            EI ++ HG E A +A    +  F        +P   I+ D +  G + L+ ++V AG A
Sbjct: 309 REIVSLYHGEEAARQAEEEFINIFQKKELPDEIPEFVITSDIMENGQVSLIKVLVAAGLA 368

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            S  EARR +   A+K+NN +I + +  +  ++        +  GK++ I  
Sbjct: 369 KSNGEARRKIVEGAVKVNNQVIKDIQSTVPPEE-----GTLIRLGKRHFIRL 415


>gi|50310061|ref|XP_455044.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49644179|emb|CAH00131.1| KLLA0E24267p [Kluyveromyces lactis]
          Length = 453

 Score =  382 bits (981), Expect = e-104,   Method: Composition-based stats.
 Identities = 139/442 (31%), Positives = 215/442 (48%), Gaps = 31/442 (7%)

Query: 3   AFKSDFLSILSERGFIHQISNPREL--DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           A K D L +L ERG + Q+S P +L  + L +   +  Y G D TA SLH G+L  LM+L
Sbjct: 12  ATKCDVLQVLRERGLVQQVSQPEKLLSEKLSNGDKIKLYCGADPTAKSLHLGNLLPLMVL 71

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSF------- 113
                 GH  +SL+GG T  +GDPS R   R ++   + Q NIE+I   + +F       
Sbjct: 72  LNFYVRGHDVVSLIGGATGKVGDPSGRKTERDVIAEAKRQGNIERIVEQYKTFFTNGLKY 131

Query: 114 ----IKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSL 169
               IK          LNN +W   +K +D L   G    +  MLS +SV SRL+ +  +
Sbjct: 132 YESRIKERDAPGKVTYLNNISWWQDVKMLDFLATYGKHIRIQNMLSRDSVSSRLQSQDGI 191

Query: 170 SFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLG-----ERLKTPKLFAL 224
            F EF Y ILQAYDF  L  N    +Q+GG+DQWGNI  GIDL      + +KT   F L
Sbjct: 192 GFNEFTYQILQAYDFYHLYSNEQVSIQVGGNDQWGNITAGIDLINRISPQHVKTRPAFGL 251

Query: 225 TSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI 284
           T PLLTT++G K GK+   A++++ E+ + Y+ +Q++ N  DADV    K  T LP+  I
Sbjct: 252 TVPLLTTSTGEKFGKSAGNAVFIDPEINTSYDMYQFFVNTTDADVAKQLKIFTLLPLELI 311

Query: 285 DRMAKLQGKEINE--AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISI- 341
           + +        NE  A+K +A E+  ++HG  + + A   +   F  S   +++    + 
Sbjct: 312 EDIMAQHALSPNERYAQKRLAKEVVDLIHGIGKGDDAEFVSRILFGGSGF-ENVKAAELI 370

Query: 342 ---SKDEVSRGMGLLTLIVK--AGFAT-STNEARRHLKSNAIKI--NNSIISNEKLQIKL 393
               ++ +   + + T +          S  E+RR +K  +I +  N + + ++      
Sbjct: 371 RVFDENRILNKIPINTPLSDIVCQLIDCSKTESRRRIKQGSIYLGPNKNKVVDDTTNFSP 430

Query: 394 QDFDSTGNIKLSFGKKNHIICH 415
                   + L  GK+   +  
Sbjct: 431 -FLIDERVLLLRVGKQKCYVIE 451


>gi|331001116|ref|ZP_08324747.1| tyrosine--tRNA ligase [Parasutterella excrementihominis YIT 11859]
 gi|329569421|gb|EGG51199.1| tyrosine--tRNA ligase [Parasutterella excrementihominis YIT 11859]
          Length = 414

 Score =  382 bits (981), Expect = e-104,   Method: Composition-based stats.
 Identities = 100/412 (24%), Positives = 181/412 (43%), Gaps = 32/412 (7%)

Query: 17  FIHQISN----PRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            I + ++      EL+   ++       +   +G D TA  +H GH   L  L   Q  G
Sbjct: 22  LIKRGTDTLLVEEELEQKLARSKATGKPLRIKLGLDPTAPDIHLGHTVVLNKLRQFQNLG 81

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H  I L+G  TS IGDPS R+ +R  +  ++I+ N +         +     +    +  
Sbjct: 82  HTVIFLVGDFTSAIGDPSGRNTTRPPLTREQIEANAKTYLDQAYKVLDKDKTE----VRF 137

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W   +     ++ + S +++ R+L  +    R   +  ++  E  Y ++Q YD V L
Sbjct: 138 NSEWCNKLGSAGFIK-LASRYTLARLLERDDFAKRFASQAPIAMHELIYPLMQGYDSVAL 196

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIW 246
               +  +++GGSDQ  N++ G +L  +        +T PLL    G  KM K+    I 
Sbjct: 197 ----EADVELGGSDQRFNLLVGRELQRQYNQEAQCIITMPLLVGLDGVNKMSKSKHNYIG 252

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIAT 304
           + +E   P   +    ++ D  + ++   L+     EI ++ K    G+   +AK ++A 
Sbjct: 253 ITEE---PNEMFGKVMSLSDDLMWNWFDLLSMRSNEEIQQLKKECEAGRNPRDAKVMLAK 309

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           EI T  H  E A+ A    +  F      +++P +++        MG+L LI +AG A S
Sbjct: 310 EIVTRFHNAEAADAAEQEFINRFRKGAVPENIPEVTLENG--GEAMGILKLIKEAGLAPS 367

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           T+EA R++    + +N   ++++ LQ++       G   L  GK+      L
Sbjct: 368 TSEAGRNVTQGGVHLNGEKVTDKALQVQP------GTYTLQVGKRKWAKVTL 413


>gi|26987177|ref|NP_742602.1| tyrosyl-tRNA synthetase [Pseudomonas putida KT2440]
 gi|81442300|sp|Q88QQ2|SYY_PSEPK RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|24981812|gb|AAN66066.1|AE016235_5 tyrosyl-tRNA synthetase [Pseudomonas putida KT2440]
          Length = 399

 Score =  382 bits (981), Expect = e-104,   Method: Composition-based stats.
 Identities = 101/408 (24%), Positives = 176/408 (43%), Gaps = 24/408 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG    +     ++ L     +    G+D TA  LH GH   +  L   Q  GH+ I
Sbjct: 10  LIKRGAEEVLVESELVEKLKRGQPLRIKAGFDPTAPDLHLGHTVLINKLRQFQDLGHQVI 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T +IGDPS +  +R  +  +++ EN E  K      +     +    +  N TW
Sbjct: 70  FLIGDFTGMIGDPSGKSATRPPLTREQVLENAETYKQQVFKILDPAKTE----VAFNSTW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +  +   D +R + S ++V RML  +    R    Q ++  EF Y ++Q YD V L  + 
Sbjct: 126 MDKLTPADFIR-LASQYTVARMLERDDFDKRYTTNQPIAIHEFLYPLVQGYDSVALKAD- 183

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G +L           +T PLL    G  KM K+L   + + + 
Sbjct: 184 ---VELGGTDQKFNLLMGRELQRSYGQEAQNIVTMPLLEGLDGVKKMSKSLGNYVGIQE- 239

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATEITT 308
             +P   +    +I D  +  + + L+   M EI++       G    + K  +A EI  
Sbjct: 240 --APGVMYSKLVSIPDTLMWRYFELLSFRSMEEIEQFRADVANGANPRDIKIKLAEEIVA 297

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
             HG E A  A  AA          + +P I ++  E    + +  ++ +AG   ++ +A
Sbjct: 298 RFHGEEAAANAHRAAGNRMKEGELPEDLPEIEVAAAE---DLPIAAVLNRAGLVKNSAQA 354

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           R  L S A+K++ +++ ++        F          GKK+     L
Sbjct: 355 RDLLNSGAVKVDGAVV-DKDFM-----FVLGATHVCQAGKKSFGRVTL 396


>gi|167031482|ref|YP_001666713.1| tyrosyl-tRNA synthetase [Pseudomonas putida GB-1]
 gi|166857970|gb|ABY96377.1| tyrosyl-tRNA synthetase [Pseudomonas putida GB-1]
          Length = 399

 Score =  382 bits (981), Expect = e-104,   Method: Composition-based stats.
 Identities = 99/408 (24%), Positives = 177/408 (43%), Gaps = 24/408 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG    +     ++ L     +    G+D TA  LH GH   +  L   Q+ GH+ I
Sbjct: 10  LIKRGAEEVLVESELVEKLKRGQPLRIKAGFDPTAPDLHLGHTVLINKLRQFQELGHQVI 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T +IGDPS +  +R  +  +++ +N E  K      +     +    +  N TW
Sbjct: 70  FLIGDFTGMIGDPSGKSATRPPLTREQVLDNAETYKQQVFKILDPAKTE----VAFNSTW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +  +   D +R + S ++V RML  +    R    Q ++  EF Y ++Q YD V L  + 
Sbjct: 126 MDKLTPADFIR-LASQYTVARMLERDDFDKRYTTNQPIAIHEFLYPLVQGYDSVALKAD- 183

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G +L           +T PLL    G  KM K+L   + + + 
Sbjct: 184 ---VELGGTDQKFNLLMGRELQRAYGQEAQNIVTMPLLEGLDGVKKMSKSLGNYVGIQE- 239

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATEITT 308
             +P   +    +I D  +  + + L+   M EI++      +G    + K  +A EI  
Sbjct: 240 --APGVMYGKLVSIPDTLMWRYFELLSFRSMEEIEQFRADVAKGANPRDIKIKLAEEIVA 297

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
             HG E A  A  AA          + +P I ++  E    + +  ++ +AG   ++ +A
Sbjct: 298 RFHGEEAAANAHRAAGNRMKEGELPEDLPEIEVAASE---DLPIAAVLNRAGLVKNSAQA 354

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           R  L   A+K++ +++ ++        F          GKK+     L
Sbjct: 355 RDLLNGGAVKVDGAVV-DKDFM-----FVLGATHVCQAGKKSFGRVTL 396


>gi|146317777|ref|YP_001197489.1| tyrosyl-tRNA synthetase [Streptococcus suis 05ZYH33]
 gi|145688583|gb|ABP89089.1| Tyrosyl-tRNA synthetase [Streptococcus suis 05ZYH33]
          Length = 307

 Score =  381 bits (980), Expect = e-104,   Method: Composition-based stats.
 Identities = 115/291 (39%), Positives = 167/291 (57%), Gaps = 2/291 (0%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +    L  RG + Q ++   L    ++G V+ Y GYD TA SLH GHL  ++    LQ  
Sbjct: 2   NIFEELKARGLVFQTTDEEALVKALTEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP +L+GG T +IGDPSF+D  R +     +   + KI+G  S F+ +  G   A M+
Sbjct: 62  GHKPYALVGGATGLIGDPSFKDAERSLQTKDTVDGWVTKIQGQLSRFLDFENGDNKAEMV 121

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   I +ID LR++G +++VN M+S +SV+ R+  E  +S+ EF Y I+Q YDF E
Sbjct: 122 NNYDWFSDISFIDFLRDVGKYYTVNYMMSKDSVKKRI--ETGISYTEFAYQIMQGYDFYE 179

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L   ++  LQ+GGSDQWGN+  G +L  R        +T PL+T ++G K GK+   A+W
Sbjct: 180 LNDKHNVTLQIGGSDQWGNMTAGTELLRRKADKSGHVMTVPLITDSTGKKFGKSEGNAVW 239

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE 297
           L+ + TSPY  +Q+W N+ D D V F K  T L + EI  + K      +E
Sbjct: 240 LDADKTSPYEMYQFWLNVMDDDAVRFLKIFTFLSLDEIAEIEKQFDAARHE 290


>gi|238019117|ref|ZP_04599543.1| hypothetical protein VEIDISOL_00979 [Veillonella dispar ATCC 17748]
 gi|237863816|gb|EEP65106.1| hypothetical protein VEIDISOL_00979 [Veillonella dispar ATCC 17748]
          Length = 402

 Score =  381 bits (980), Expect = e-104,   Method: Composition-based stats.
 Identities = 100/408 (24%), Positives = 178/408 (43%), Gaps = 30/408 (7%)

Query: 18  IHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPIS 72
           +  + N ++L     +       +   +G D TA  +H GH   L  L   Q+ GH+ + 
Sbjct: 15  VADLINEQDLVKKIEKSIKENKPLVVKLGLDPTAPDIHLGHTVPLRKLRLFQEFGHQVVI 74

Query: 73  LMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL 132
           ++GG T+ IGDP+ +  +R  +  +E+ +N E  K      +         ++ +N  WL
Sbjct: 75  VIGGFTARIGDPTGKSVTRPPLTKEEVLKNAETYKTQIFKVLD----PEKTIVRDNSEWL 130

Query: 133 CSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYD 192
            S+ + D+LR + S ++V RM+  +    R K  +++   EF Y ++Q  D V L  +  
Sbjct: 131 ESMNFADVLR-LASSYTVARMMERDDFNKRFKEGRAIGVHEFMYPLMQGQDSVALHAD-- 187

Query: 193 CRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEM 251
             ++ GG+DQ  N++ G  L E         +T PLL    G  KM K+L   I +++E 
Sbjct: 188 --VEFGGTDQTFNLLMGRHLQELEGQEPQVVITMPLLEGLDGVQKMSKSLGNYIGIDEE- 244

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAKKIIATEITT 308
             P   +    +I D  ++ +   +T +P+ E + M K          +AK  +A  I  
Sbjct: 245 --PKEMYGKAMSIPDELMMRYFMLVTDMPIEEQEDMEKRLESGELHPRDAKMQLARTIVR 302

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
           + HG E A +A       F        +P  ++  D  +  + +      AG   S  EA
Sbjct: 303 LYHGEEAALEAEEEFKRVFQQRALPTDIPECAM--DAPTEPIFVPQFCTDAGLTASNGEA 360

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           RR +K+ A K+N    + E L ++         + +  GK+  +    
Sbjct: 361 RRSIKAGAFKVNGEKYTEENLTLEDG-------MIVQVGKRKFVKIKF 401


>gi|58259980|ref|XP_567400.1| tyrosine-tRNA ligase [Cryptococcus neoformans var. neoformans
           JEC21]
 gi|134116152|ref|XP_773247.1| hypothetical protein CNBJ0260 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50255869|gb|EAL18600.1| hypothetical protein CNBJ0260 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57229450|gb|AAW45883.1| tyrosine-tRNA ligase, putative [Cryptococcus neoformans var.
           neoformans JEC21]
          Length = 478

 Score =  381 bits (979), Expect = e-103,   Method: Composition-based stats.
 Identities = 147/457 (32%), Positives = 226/457 (49%), Gaps = 46/457 (10%)

Query: 3   AFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
           A K+  L  L ERGF+  I++  +L    +    T Y G D +ASSLH G+L  L+ L  
Sbjct: 24  APKATVLQELDERGFVAAITS-DKLKQHVAS-PTTIYSGVDPSASSLHVGNLIPLLGLLH 81

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG----- 117
            Q  GH+ I L+GG T  IGDPS R   R+ +   E++ NI  I      F   G     
Sbjct: 82  FQARGHQSICLIGGATGSIGDPSGRSTERKSLTPSELRLNIAGITSQVHRFFIRGQEYLS 141

Query: 118 -----------TGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE 166
                       G     ++NN  W+  +  +D LR  G    V+ MLS +SV++RL  +
Sbjct: 142 KRGMDLTAMSKDGGRGVKVMNNYDWMRDVSLLDFLRTTGKMARVSTMLSRDSVKNRLSSD 201

Query: 167 QSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER----------- 215
             +S+ EF Y +LQAYDF  L   + C +Q+GGSDQWGNI+ GIDL  R           
Sbjct: 202 SGISYTEFTYQLLQAYDFSHLHSEHGCNIQLGGSDQWGNIVAGIDLIRRGKIAEREEKGE 261

Query: 216 ---LKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSF 272
               +   ++ LT PLLTT++G K GK+   A+WL+++ TS   F+Q++    D DV  +
Sbjct: 262 QVKEEEEDVYGLTIPLLTTSTGEKFGKSAGNAVWLDEKRTSAAEFYQFFLRTTDEDVEKY 321

Query: 273 AKRLTTLPMSEIDRMAKLQG--KEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMS 330
            K  T LP+S+I  + +     K     +K++A E+T +VHG     +A TAA   +  S
Sbjct: 322 LKLFTFLPLSQIQDVMQAHQISKTERLPQKLLAAEVTELVHGPAALTRALTAAQVLYSTS 381

Query: 331 IHSQHMPTI-----------SISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKI 379
             S     +            + K+ ++  MG+  + V  G   S  E +R ++S A+++
Sbjct: 382 TSSLTAEKVLDAFRGDKRFHRVKKENLAE-MGVGKMAVTYGLCGSVGETQRLVQSFALQV 440

Query: 380 NNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           N+  IS+ + +I ++D        +  G K  II ++
Sbjct: 441 NDRKISDHREKIAVEDLVDGHIAIVRAGNKRQIILYV 477


>gi|221069189|ref|ZP_03545294.1| tyrosyl-tRNA synthetase [Comamonas testosteroni KF-1]
 gi|220714212|gb|EED69580.1| tyrosyl-tRNA synthetase [Comamonas testosteroni KF-1]
          Length = 438

 Score =  381 bits (979), Expect = e-103,   Method: Composition-based stats.
 Identities = 96/386 (24%), Positives = 168/386 (43%), Gaps = 26/386 (6%)

Query: 35  VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMM 94
            +   +G D TA  +H GH   L  +  LQ  GH+ I L+G  T++IGDPS R+ +R  +
Sbjct: 76  PLRIKLGLDPTAPDIHLGHTVVLNKMRQLQDLGHQVIFLIGDFTTLIGDPSGRNSTRPPL 135

Query: 95  RSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRML 154
            +++I+ N E      +  +     +    +  N  W   +    ++ ++ + ++V RM+
Sbjct: 136 TAEQIKANAETYYTQAAKVLDPARTE----VRYNSEWCDQLGARGMI-QLSAKYTVARMM 190

Query: 155 SFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
                 +R     S+S  EF Y +LQ YD V L  +    L++GG+DQ  N++ G  L  
Sbjct: 191 ERNDFHTRFTDGSSISLHEFLYPLLQGYDSVALKSD----LELGGTDQKFNLMMGRHLQA 246

Query: 215 RLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFA 273
                +   LT PLL    G  KM K+ +  I + ++  +    +    +I D  +  + 
Sbjct: 247 EYGQEQQCVLTMPLLVGLDGVHKMSKSKNNYIGITEDANT---MFAKVLSISDELMWDWY 303

Query: 274 KRLTTLPMSEID--RMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSI 331
             L+   +++I   +     G     AK  +A EIT   H    AE A    +       
Sbjct: 304 TLLSFKSLADIAALKAEIEAGGNPKHAKVALAKEITARFHSAAAAETAEQDFINR-SKGG 362

Query: 332 HSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
               +P I++        +G+  L+ +A  A ST EA R +    ++I+ ++IS+  L++
Sbjct: 363 IPDDIPEINLP----GAPLGIGALVKQANLAASTGEANRLIDGGGVRIDGNVISDRALKL 418

Query: 392 KLQDFDSTGNIKLSFGKKNHIICHLC 417
                   G   L  GK+      L 
Sbjct: 419 DA------GTFVLQVGKRKFARVTLS 438


>gi|294793862|ref|ZP_06758999.1| tyrosine--tRNA ligase [Veillonella sp. 3_1_44]
 gi|294455432|gb|EFG23804.1| tyrosine--tRNA ligase [Veillonella sp. 3_1_44]
          Length = 402

 Score =  381 bits (979), Expect = e-103,   Method: Composition-based stats.
 Identities = 99/408 (24%), Positives = 178/408 (43%), Gaps = 30/408 (7%)

Query: 18  IHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPIS 72
           +  + N ++L     +       +   +G D TA  +H GH   L  L   Q+ GH+ + 
Sbjct: 15  VADLINEQDLVKKIEKSIKENKPLVVKLGLDPTAPDIHLGHTVPLRKLRLFQEFGHQVVI 74

Query: 73  LMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL 132
           ++GG T+ IGDP+ +  +R  +  +E+ +N E  K      +         ++ +N  WL
Sbjct: 75  VIGGFTARIGDPTGKSVTRPPLTKEEVLKNAETYKTQIFKVLD----PEKTIVRDNSEWL 130

Query: 133 CSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYD 192
            S+ + D+LR + S ++V RM+  +    R K  + +   EF Y ++Q +D V L  +  
Sbjct: 131 ESMNFADVLR-LASSYTVARMMERDDFSKRFKEGRPIGVHEFMYPLMQGHDSVALHAD-- 187

Query: 193 CRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEM 251
             ++ GG+DQ  N++ G  L E         +T PLL    G  KM K+L   I +++E 
Sbjct: 188 --VEFGGTDQTFNLLMGRHLQELEGQEPQVVITMPLLEGLDGIQKMSKSLGNYIGIDEE- 244

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAKKIIATEITT 308
             P   +    +I D  ++ +   +T + + E + M K          +AK  +A  I  
Sbjct: 245 --PKEMYGKAMSIPDELMMRYFMLVTDMSIEEQEDMTKRLESGELHPRDAKMQLARTIVR 302

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
           + HG E A +A       F        +P  ++  D  +  + +      AG   S  EA
Sbjct: 303 LYHGEEAALEAEEEFKRVFQQRAMPTDIPEYAM--DAPTEPIFVPQFCTDAGLTASNGEA 360

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           RR +K+ A K+N    + E L+++         + +  GK+  +    
Sbjct: 361 RRSIKAGAFKVNGEKYTEENLKLEDG-------MIIQVGKRKFVKIKF 401


>gi|149182242|ref|ZP_01860722.1| tyrosyl-tRNA synthetase [Bacillus sp. SG-1]
 gi|148850011|gb|EDL64181.1| tyrosyl-tRNA synthetase [Bacillus sp. SG-1]
          Length = 415

 Score =  381 bits (979), Expect = e-103,   Method: Composition-based stats.
 Identities = 100/407 (24%), Positives = 177/407 (43%), Gaps = 29/407 (7%)

Query: 19  HQISNPRELDILCSQG-----VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
            +I     L    ++       +   +G D +A  +H GH   L  +   Q+ GH    +
Sbjct: 28  QEIIPEAGLKQKIAKSIKTNTPLKIKLGLDPSAPDVHIGHTVVLNKMRQFQQNGHIVQLI 87

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
           +G  T  IGDP+ +  +R+ +  +E++ N +     F   +     K    +  N  WL 
Sbjct: 88  IGDFTGKIGDPTGKSAARKQLTDEEVKHNAQTYFEQFGKVLD----KEKVELFYNSKWLK 143

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDC 193
           ++   D++   GS  +V R+L       RL   + +S  EF Y ++Q YD V L  +   
Sbjct: 144 NLNLEDVIHLAGS-ITVARLLERNDFSERLAAGKPISLHEFFYPLMQGYDSVVLESD--- 199

Query: 194 RLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMT 252
            +++GG+DQ  N++ G  L E     K   +  PLL    G  KM K+    I +++   
Sbjct: 200 -IELGGTDQHFNVLMGRGLQEHYGKEKQVVMMLPLLEGLDGKEKMSKSKHNYIGIDE--- 255

Query: 253 SPYNFWQYWRNIDDADVVSFAKRLTTLPMSE---IDRMAKLQGKEINEAKKIIATEITTM 309
           +P   +    +I D  ++ + +  T L + E   I    +       +AK ++   +  M
Sbjct: 256 APSEMFGKTMSIPDELMMKYFELATDLSLEEKNSIGENLENGTLHPRDAKMLLGRTLVRM 315

Query: 310 VHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEAR 369
            H  E AEKA T     F      + +P +  +K   SR + ++ L+V+     S +EAR
Sbjct: 316 YHSEEAAEKAQTQFKAVFQKGAVPEDIPVVHWNK---SREISVVELLVELKMMKSKSEAR 372

Query: 370 RHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           R + +  +KIN S + +  L++ L D      + L+ GK+      L
Sbjct: 373 RMIGNGGVKINGSKVEDPALEVSLAD-----GLILNVGKRKFTKIKL 414


>gi|119773987|ref|YP_926727.1| tyrosyl-tRNA synthetase [Shewanella amazonensis SB2B]
 gi|119766487|gb|ABL99057.1| tyrosyl-tRNA synthetase [Shewanella amazonensis SB2B]
          Length = 399

 Score =  381 bits (979), Expect = e-103,   Method: Composition-based stats.
 Identities = 97/417 (23%), Positives = 182/417 (43%), Gaps = 24/417 (5%)

Query: 6   SDFLSILSE--RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           +D   +L+E  RG    +     ++ L     +   +G D TA  +H GH   L  L   
Sbjct: 2   ADLDQVLAEIKRGTDEILLEADLIEKLKEGRPLRVKLGADPTAPDIHLGHTVILNKLRLF 61

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q+ GH+ I L+G  T ++GDPS ++ +R  +  +++  N E  K      +     +   
Sbjct: 62  QELGHEVIFLIGDFTGMVGDPSGKNSTRPPLTREQVLANAETYKEQVYKILDPAKTR--- 118

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            +  N +WL  +    ++R + S  +V RML  +  + R    Q ++  EF Y +LQ +D
Sbjct: 119 -IEFNSSWLEQLGAAGMIR-LASHQTVARMLERDDFKKRYGSGQPIAIHEFMYPLLQGWD 176

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLS 242
            V L  +    +++GG+DQ  N++ G +L +         +  PLL    G  KM K+  
Sbjct: 177 SVALKAD----IELGGTDQKFNLLMGRELQKAEGQKPQTVIMMPLLEGLDGVKKMSKSAH 232

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKK 300
             I +++   +P   +    +I D  +  +   L+  P++E+ +       G    + K 
Sbjct: 233 NYIGVSE---APDEMFGKLMSISDELMWRYFDLLSFRPLAEVQQFKADVEAGANPRDIKI 289

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
            +A EI    H +  A+ A    ++ F        +  +++S    + GM +  L+ +AG
Sbjct: 290 ALAKEIIARFHDQAAADAAHQNFIDRFQKGAIPDDIEEVTLSAG--AEGMAVANLLKEAG 347

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
              ST++A R +K  A+K++   + + K       F +  +     GK+      L 
Sbjct: 348 LVGSTSDAMRMIKQGAVKMDGEKLEDAKQV-----FSAGLSAVFQVGKRKFAKVTLS 399


>gi|40062628|gb|AAR37557.1| tyrosyl-tRNA synthetase [uncultured marine bacterium 311]
          Length = 397

 Score =  381 bits (979), Expect = e-103,   Method: Composition-based stats.
 Identities = 100/405 (24%), Positives = 171/405 (42%), Gaps = 22/405 (5%)

Query: 15  RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLM 74
           RG    I        L  +  +   +G+D TA  LH GH   L  L   Q  GH+ I L+
Sbjct: 11  RGVEEVIPKEEFHKKLDKKRPLRIKLGFDPTAPDLHLGHTVILNKLKLFQDLGHQVIFLI 70

Query: 75  GGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCS 134
           G  T ++GDPS  +E+R ++  +EI++N +  +      +     K    +  N  W+  
Sbjct: 71  GDFTGLVGDPSGVNETRPVLSEKEIKKNAKTYERQVFKILD----KKKTEIRFNSEWMNK 126

Query: 135 IKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCR 194
               + +R + S  +V RML  +    R   ++ +S  EF Y +LQ YD V L  +    
Sbjct: 127 FSPEEFIR-LSSVQTVARMLERDDFHKRYTSQKPISIHEFLYPLLQGYDSVALNAD---- 181

Query: 195 LQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTS 253
           +++GG+DQ  N++ G ++ +          T PLL    G  KM K+L   I +      
Sbjct: 182 VELGGTDQKFNLLLGREVQKFYGKEPQVIFTLPLLEGLDGDKKMSKSLGNYIAIEDSQN- 240

Query: 254 PYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATEITTMVH 311
               +    +I D  +  + + L+     EI+++ K   +G    + K ++A EI    H
Sbjct: 241 --EIFGKIMSISDELMWRYFELLSFKKQEEINKLKKSQKEGLNPRDIKFLLAEEIVDRFH 298

Query: 312 GREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRH 371
           G     KA       F        +  I I   E  + + L  ++ +AG  +ST+EA R 
Sbjct: 299 GEGSGNKAREEFKSRFQQGNSPSEIKEIEIKLME--KDISLPKILKEAGMVSSTSEALRL 356

Query: 372 LKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +K   ++I    I + K +I         ++    GK+      +
Sbjct: 357 IKQGGVRIEGKKILDSKYKIN-----RNSSLLYQVGKRKFFRIKI 396


>gi|255715553|ref|XP_002554058.1| KLTH0E13354p [Lachancea thermotolerans]
 gi|238935440|emb|CAR23621.1| KLTH0E13354p [Lachancea thermotolerans]
          Length = 463

 Score =  381 bits (978), Expect = e-103,   Method: Composition-based stats.
 Identities = 135/438 (30%), Positives = 210/438 (47%), Gaps = 31/438 (7%)

Query: 6   SDFLSILSERGFIHQISNPRE-LDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
            + L  L +RG + Q+S P   L      G  +  Y G D TA SLH G+L  LM+L   
Sbjct: 31  KNVLQTLRDRGLLAQVSQPENVLRTKLESGEKLKLYCGADPTAESLHLGNLLPLMVLLHF 90

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT----- 118
              GH   +L+GG T I+GDPS R   R  +   + Q N+  I+G    F + G      
Sbjct: 91  YIKGHDVYTLVGGATGIVGDPSGRKTERTAIEETKRQSNVSNIQGQLQRFFENGLAYYKG 150

Query: 119 -----GKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLE 173
                    A+  NN  W   +K +D L   G    V  MLS +SV SRL  +  + F E
Sbjct: 151 RYGHVSNGKAVHTNNYDWWHDMKMLDFLGRYGRHIRVQSMLSRDSVSSRLGSQDGIGFNE 210

Query: 174 FNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKL-FALTSPLLTTA 232
           F Y ILQAYDF  L + +   +Q+GG+DQWGNI  GIDL  R+ +    F LT PLLTT+
Sbjct: 211 FTYQILQAYDFYHLNQIHGVAVQVGGNDQWGNITAGIDLISRIGSKSQPFGLTVPLLTTS 270

Query: 233 SGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG 292
           +G K GK+   A++++  M + ++ +Q++ +  D DV    +  T LP+ EI+ + +   
Sbjct: 271 TGEKFGKSAGNAVFIDPTMNTSFDMYQFFMHTTDEDVAKLLRIFTLLPLQEINAVVQTHM 330

Query: 293 KEINE--AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISI--------S 342
           +   +  A+K++  E+  +VHG      A   +   F    H   +P   +         
Sbjct: 331 ESPKDRIAQKLLGREVVDLVHGSGRGNDAEMVSEILF--GNHQLQLPANELIRLFREARH 388

Query: 343 KDEVSRGMGLLTLIVK-AGFATSTNEARRHLKSNAIKI--NNSIISNEKLQIKLQDFDST 399
                RG+ L  L+V+  G   S +EARR LK  ++ +  + + + N+   ++ Q +   
Sbjct: 389 LVSFPRGLSLEELLVRVTGC--SRSEARRKLKQGSVYLGSDKTRVLNDIESLE-QFYIDD 445

Query: 400 GNIKLSFGKKNHIICHLC 417
             + L  GK+   +  + 
Sbjct: 446 QVLILRIGKQKCFVIEIV 463


>gi|313496801|gb|ADR58167.1| TyrS [Pseudomonas putida BIRD-1]
          Length = 399

 Score =  381 bits (978), Expect = e-103,   Method: Composition-based stats.
 Identities = 101/408 (24%), Positives = 176/408 (43%), Gaps = 24/408 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG    +     ++ L     +    G+D TA  LH GH   +  L   Q  GH+ I
Sbjct: 10  LIKRGAEEVLVESELVEKLKRGQPLRIKAGFDPTAPDLHLGHTVLINKLRQFQDLGHQVI 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T +IGDPS +  +R  +  +++ EN E  K      +     +    +  N TW
Sbjct: 70  FLIGDFTGMIGDPSGKSATRPPLTREQVLENAETYKQQVFKILDPAKTE----VAFNSTW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +  +   D +R + S ++V RML  +    R    Q ++  EF Y ++Q YD V L  + 
Sbjct: 126 MDKLTPADFIR-LASQYTVARMLERDDFDKRYTTNQPIAIHEFLYPLVQGYDSVALKAD- 183

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G +L           +T PLL    G  KM K+L   + + + 
Sbjct: 184 ---VELGGTDQKFNLLMGRELQRSYGQEAQNIVTMPLLEGLDGVKKMSKSLGNYVGIQE- 239

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATEITT 308
             +P   +    +I D  +  + + L+   M EI++       G    + K  +A EI  
Sbjct: 240 --APGVMYSKLVSIPDTLMWRYFELLSFRSMEEIEQFRADVANGANPRDIKIKLAEEIVA 297

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
             HG E A  A  AA          + +P I ++  E    + +  ++ +AG   ++ +A
Sbjct: 298 RFHGEEAAANAHRAAGNRMKEGELPEGLPEIEVAAAE---DLPIAAVLNRAGLVKNSAQA 354

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           R  L S A+K++ +++ ++        F          GKK+     L
Sbjct: 355 RDLLNSGAVKVDGAVV-DKDFM-----FVLGATHVCQAGKKSFGRVTL 396


>gi|221632775|ref|YP_002521997.1| tyrosyl-tRNA synthetase [Thermomicrobium roseum DSM 5159]
 gi|221155495|gb|ACM04622.1| tyrosyl-tRNA synthetase [Thermomicrobium roseum DSM 5159]
          Length = 405

 Score =  381 bits (978), Expect = e-103,   Method: Composition-based stats.
 Identities = 105/414 (25%), Positives = 183/414 (44%), Gaps = 26/414 (6%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           +  F+ +L  RG +  +        L  +  +   +G D T   +H GH      L   Q
Sbjct: 7   REAFVDLLLSRGTVDVVVREHLRARLLGEQPLRVKLGVDPTRPDIHLGHYVCFRKLRQFQ 66

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GH+ + ++G  T+ IGDPS R   R M+ ++E++ N E     F   +      T A 
Sbjct: 67  ALGHQVVVIIGDWTARIGDPSGRSSQRPMLTAEEVRANAETYLEQFFKVVDV----TKAE 122

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           ++   TW  +    D++R + S ++V ++L+ E    R +    +S  E  Y +LQAYD 
Sbjct: 123 IVWQSTWFGNFTLEDVIR-LASKYTVAKLLTREDFAKRYEEGSPISITELLYPLLQAYDS 181

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSG 243
           V +  +    +++GG+DQ  N++ G D+           LT PLL    G  KM K+   
Sbjct: 182 VAIQAD----VEIGGTDQLFNLLVGRDIMREYGLEPQDILTVPLLVGTDGHLKMSKSYGN 237

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAKK 300
            I +N     P   +    +I D  +  + + LT +P  EIDRM            +AK+
Sbjct: 238 YIAVN---DPPEEMFGKIMSIPDHVLGDYFRLLTDIPDEEIDRMIVEMRAGRLNPRDAKE 294

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
            +A  I + +H  E AE+A         +    + +P + +          +L  +V AG
Sbjct: 295 HLAFVIVSDLHSPEAAEQAREHFHRVHRLREIPEQIPEVPVPGR-----ARVLDYVVLAG 349

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           FA S NEARR ++   ++++   + + +  ++LQ+      + L  GK+     
Sbjct: 350 FARSNNEARRLVQQGGVRLDGRRLDDPEEMLELQE-----PVVLQVGKRRFARL 398


>gi|241766103|ref|ZP_04764014.1| tyrosyl-tRNA synthetase [Acidovorax delafieldii 2AN]
 gi|241363856|gb|EER59176.1| tyrosyl-tRNA synthetase [Acidovorax delafieldii 2AN]
          Length = 410

 Score =  381 bits (978), Expect = e-103,   Method: Composition-based stats.
 Identities = 100/413 (24%), Positives = 183/413 (44%), Gaps = 30/413 (7%)

Query: 11  ILSERGFIHQISNPRELDILCSQG----VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
            +S RG    +     +  L         +   +G D TA  +H GH   L  +  LQ  
Sbjct: 20  EISLRGADELLPQDEWIKKLARSETTGQPLRIKLGLDPTAPDIHIGHTVVLNKMRQLQDL 79

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+ I L+G  TS+IGDPS R+ +R  +  ++I+ N E      S  +     +    + 
Sbjct: 80  GHQVIFLIGDFTSLIGDPSGRNSTRPPLTPEQIKFNAETYYRQASMVLDPARTE----IR 135

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
            N  W   +    ++ ++ + F+V RM+       R K    ++  EF Y ++Q YD V 
Sbjct: 136 YNSEWSEPLGATGMI-QLAAKFTVARMMERNDFHDRFKAGNPIAVHEFLYPLMQGYDSVA 194

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAI 245
           L  +    L++GG+DQ  N++ G  L +         LT PLL    G  KM K+ +  I
Sbjct: 195 LKSD----LELGGTDQKFNLLMGRHLQQEYGQEPQCILTMPLLEGLDGIEKMSKSKNNYI 250

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIA 303
            ++++  +    +    +I D  +  +   L+   ++EI+  +     G+   +AK ++A
Sbjct: 251 GISEDANT---MYAKVLSISDTLMWRWYTLLSFKSLAEIEVLKAEVAGGRNPKDAKVLLA 307

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
            EIT   H    AE A    +           +P +++S       +G+  L+ +A  A 
Sbjct: 308 KEITARFHSAAAAEAAEQDFINR-SKGGVPDEIPEVTLS----GAPLGIGALLKQANLAP 362

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           ST+EA R ++   ++++ S++S++ L+++       G   +  GK+      L
Sbjct: 363 STSEANRLIEGGGVRVDGSVVSDKGLKLEA------GTYVVQVGKRKFARVAL 409


>gi|221194508|ref|ZP_03567565.1| tyrosyl-tRNA synthetase [Atopobium rimae ATCC 49626]
 gi|221185412|gb|EEE17802.1| tyrosyl-tRNA synthetase [Atopobium rimae ATCC 49626]
          Length = 403

 Score =  381 bits (978), Expect = e-103,   Method: Composition-based stats.
 Identities = 106/399 (26%), Positives = 175/399 (43%), Gaps = 21/399 (5%)

Query: 20  QISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGT 78
           QI     L    ++G  +T  +G D T+  LH GH   L  +   Q  GH    ++G GT
Sbjct: 17  QIVPLEGLKEKLAKGKPLTIKLGVDPTSPDLHLGHAVPLRKMRQFQDLGHNVTLIIGNGT 76

Query: 79  SIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYI 138
           ++IGDPS RD +R  + S++I+ N +         +          +++N  W+  +   
Sbjct: 77  ALIGDPSGRDSTRPPLTSEQIEVNAQTYVEQAMKILDPDRT----TVVHNGDWIKPMNLE 132

Query: 139 DLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMG 198
            +L  + S F+V R+L  E    R   +QS++  EF Y +LQAYD V +  +    ++MG
Sbjct: 133 TML-SLMSKFTVARILEREDFSKRYHNQQSIALHEFIYPVLQAYDSVMIKAD----VEMG 187

Query: 199 GSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNF 257
           G+DQ  N++ G DL          ALT PLL    G  KM K+    I L  E   P + 
Sbjct: 188 GNDQIFNLLAGRDLMRDEGMEPQIALTMPLLEGTDGVKKMSKSYGNYIGLTDE---PADM 244

Query: 258 WQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKIIATEITTMVHGRE 314
           +    +I D  V  + +  +TL + EID +    +    +    K+ +   I  + HG +
Sbjct: 245 FGKIMSIPDELVARYYRLCSTLSIDEIDAIDASFEDGTADPYALKRALGRNIVELYHGAD 304

Query: 315 EAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGM-GLLTLIVKAGFATSTNEARRHLK 373
           +A +A  A    F        +   S+      +G+  L  L+V+   + S  +ARR + 
Sbjct: 305 KAAQAEEAFDALFKKHEIPDDVAEFSVELVRNEQGLVYLPKLMVEVKLSASAGDARRLID 364

Query: 374 SNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
              +KIN   ++ +   +     D      L  GK+   
Sbjct: 365 GGGVKINGEALAPKSYNVDPDLLDHA---ILQAGKRRFA 400


>gi|15615790|ref|NP_244094.1| tyrosyl-tRNA synthetase [Bacillus halodurans C-125]
 gi|81785909|sp|Q9K7X9|SYY_BACHD RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|10175851|dbj|BAB06947.1| tyrosyl-tRNA synthetase [Bacillus halodurans C-125]
          Length = 412

 Score =  380 bits (977), Expect = e-103,   Method: Composition-based stats.
 Identities = 105/412 (25%), Positives = 185/412 (44%), Gaps = 31/412 (7%)

Query: 9   LSILSERGFIHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           L IL  RG +  I     L     +       +   +G D +A  +H GH   L  L   
Sbjct: 18  LEILK-RGVVE-IVPEEALREKIEKSVRTGKPLKVKLGMDPSAPDVHIGHTVVLHKLRQF 75

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q  GH+   L+G  T  IGDPS + E+R+ +  ++++ N       +   +        A
Sbjct: 76  QDLGHEVQMLIGDFTGRIGDPSGKSETRKQLTDEQVKANARTYVEQYGKILD----MEKA 131

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            +  N  WL ++ + D+++ + S  +V RML  +    R K  Q +S  EF Y ++Q YD
Sbjct: 132 TLHYNSKWLSALNFEDVIK-LASQMTVARMLERDDFEKRYKSGQPISIHEFFYPLMQGYD 190

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLS 242
            V L  +    +++GG+DQ  N++ G  L E     K  A+T PL+    G  KM K+L+
Sbjct: 191 SVALESD----IEIGGTDQKFNLLMGRMLQEAYGNDKQVAITMPLIEGLDGERKMSKSLN 246

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSE---IDRMAKLQGKEINEAK 299
             I +++   +P   +    +I D  +V + +  T L M E   I +  +       +AK
Sbjct: 247 NYIGIDE---APNEIFGKAMSIPDELMVKYYELATDLSMDEVKAIAKGLEDGSVHPRDAK 303

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKA 359
             +   +  M HG +EAE+A       F        +P +   K +    + ++ L+V  
Sbjct: 304 MKLGATLVRMYHGEKEAEEAVNYFKTVFQKRDLPTDIPEV---KWDGESPVWIVDLLVTL 360

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
               S  EARR +++  +K+N   + + +LQ++++D      + +  GK+  
Sbjct: 361 DLLPSKGEARRMVQNGGVKLNGEKVEDVQLQVEIED-----GLIVQVGKRKF 407


>gi|319778566|ref|YP_004129479.1| Tyrosyl-tRNA synthetase [Taylorella equigenitalis MCE9]
 gi|317108590|gb|ADU91336.1| Tyrosyl-tRNA synthetase [Taylorella equigenitalis MCE9]
          Length = 407

 Score =  380 bits (977), Expect = e-103,   Method: Composition-based stats.
 Identities = 103/420 (24%), Positives = 193/420 (45%), Gaps = 32/420 (7%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLML 59
           M   +     IL E  F+       +L      G  +   +G D TA  LH GH   L  
Sbjct: 15  MDIVRRGTDEILVESEFL------EKLQKSHDSGTPLRIKLGLDPTAPDLHLGHTVVLTK 68

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG 119
           +  LQ  GH+ I L+G  T+ IGDPS R+ +R  +  ++I+ N +      S  +     
Sbjct: 69  MRQLQDMGHEVIFLIGDFTATIGDPSGRNATRPPLTKEQIEVNAQTYYDQASKVLD---- 124

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
            +  ++  N  W  ++    L+ E+ S ++V R++  +    R K    +S  E  Y ++
Sbjct: 125 PSKTVISYNSKWCDALGARGLI-ELASKYTVARIMERDDFTKRFKGGIPISMHEILYPLM 183

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMG 238
           Q YD V L  +    +++GG+DQ  N++ G +L +    P+   LT PLL    G  KM 
Sbjct: 184 QGYDSVALKSD----MELGGTDQKFNLLVGRELQKEYGQPQQTVLTMPLLVGLDGVEKMS 239

Query: 239 KTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEIN 296
           K+ +  I + +   +P + +    +I D+ + ++ + +++  + EI ++ +    G    
Sbjct: 240 KSKNNYIGITE---TPDSMFGKIMSISDSLMWNYYELISSKSLDEIKKLKQDVEDGINPR 296

Query: 297 EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLI 356
             K  +A EI T  H  + AEKA       F      + +P +++   E    MG+++++
Sbjct: 297 NIKVALAQEIITRFHNSQAAEKALADFELRFRDGQIPEDIPEVTLPGPE----MGIVSVL 352

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            ++G A S +EA R++    +K++ S + ++ L +K      +G   +  GK+      +
Sbjct: 353 RESGLAVSGSEASRNIVQGGVKVDGSKVEDKGLILK------SGTYVVQIGKRKFARITI 406


>gi|294791997|ref|ZP_06757145.1| tyrosine--tRNA ligase [Veillonella sp. 6_1_27]
 gi|294457227|gb|EFG25589.1| tyrosine--tRNA ligase [Veillonella sp. 6_1_27]
          Length = 402

 Score =  380 bits (977), Expect = e-103,   Method: Composition-based stats.
 Identities = 100/408 (24%), Positives = 179/408 (43%), Gaps = 30/408 (7%)

Query: 18  IHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPIS 72
           +  + N ++L     +       +   +G D TA  +H GH   L  L   Q+ GH+ + 
Sbjct: 15  VADLINEQDLVKKIEKSIKENKPLVVKLGLDPTAPDIHLGHTVPLRKLRLFQEFGHQVVI 74

Query: 73  LMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL 132
           ++GG T+ IGDP+ +  +R  +  +E+ +N E  K      +         ++ +N  WL
Sbjct: 75  VIGGFTARIGDPTGKSVTRPPLTKEEVLKNAETYKTQIFKVLD----PEKTIVRDNSEWL 130

Query: 133 CSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYD 192
            S+ + D+LR + S ++V RM+  +    R K  + +   EF Y ++Q +D V L  +  
Sbjct: 131 ESMNFADVLR-LASSYTVARMMERDDFSKRFKEGRPIGVHEFMYPLMQGHDSVALHAD-- 187

Query: 193 CRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEM 251
             ++ GG+DQ  N++ G  L E         +T PLL    G  KM K+L   I +++E 
Sbjct: 188 --VEFGGTDQTFNLLMGRHLQELEGQEPQVVITMPLLEGLDGIQKMSKSLGNYIGIDEE- 244

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAKKIIATEITT 308
             P   +    +I D  ++ +   +T + + E + MAK          +AK  +A  I  
Sbjct: 245 --PKEMYGKAMSIPDELMMRYFMLVTDMSIEEQEDMAKRLESGELHPRDAKMQLARTIVR 302

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
           + HG E A +A       F        +P  ++  D  +  + +      AG   S  EA
Sbjct: 303 LYHGEEAAFEAEEEFKRVFQQRAMPTDIPEYAM--DAPTEPIFVPQFCTDAGLTASNGEA 360

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           RR +K+ A K+N    + E L+++         + +  GK+  +    
Sbjct: 361 RRSIKAGAFKVNGEKYTEENLKLEDG-------MIVQVGKRKFVKIKF 401


>gi|91092398|ref|XP_968995.1| PREDICTED: similar to tyrosyl-tRNA synthetase [Tribolium castaneum]
          Length = 457

 Score =  380 bits (977), Expect = e-103,   Method: Composition-based stats.
 Identities = 130/436 (29%), Positives = 214/436 (49%), Gaps = 24/436 (5%)

Query: 4   FKSDFLSILSERGFIHQISNPRE---LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           + S  L  L ERG    I        +  L +      Y G+D TA SLH G+L  L+ L
Sbjct: 19  YSSRNLLKLKERGMYQDIFPDTATNTVTDLLNAAPQRVYAGFDPTADSLHIGNLLVLINL 78

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFS----SFIKY 116
              Q+ GH+PI+L+GG T+ IGDPS +   R  + S  + EN+  I+        +  KY
Sbjct: 79  IHWQRGGHQPIALIGGATAKIGDPSGKTSEREKLASAFVDENVIGIRNNIETLFYNHEKY 138

Query: 117 GTGKTDA----LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFL 172
              K       +++NNE+W   +  IDL+   G +  +  +LS  SV++RL+    +SF 
Sbjct: 139 LWKKKGKLAPLIIVNNESWYSKMSPIDLIGGAGRYLRMGTLLSRTSVQTRLQSPAGMSFT 198

Query: 173 EFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTA 232
           EF+Y + QAYD++ L + Y+C  Q+GG+DQ GNI+ G +L  +    +++ALT P++TT 
Sbjct: 199 EFSYQLFQAYDWLHLFQKYNCSFQIGGNDQMGNIMSGHELISKTCDKQVYALTVPIITTE 258

Query: 233 SGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG 292
            G K GK+   A+WL+ E TSP+  +Q++    D +V    K  T  P+  I  + +   
Sbjct: 259 MGDKFGKSAGNAMWLSAEKTSPFTLYQFFVRQVDTEVEKMLKFFTFEPVGSIKDLMRRHT 318

Query: 293 --KEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSI------HSQHMPTI----S 340
              E+   +K +A ++  +VHG +  E A  A    ++ SI      +   + ++    +
Sbjct: 319 EKPELRLPQKYLAEQVVLLVHGEKGLEAAHKATKVLYERSITALAEMNPLEIKSLFEGAT 378

Query: 341 ISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ-DFDST 399
           + +     G  +L L + AG   +  +A R + +    IN+   +N    + L     S 
Sbjct: 379 VVEILPEPGQSVLDLAMSAGCFLTKEDALRIISAGGFYINHQKTNNPNEVLNLNVHRLSN 438

Query: 400 GNIKLSFGKKNHIICH 415
               L  GKKN+ +  
Sbjct: 439 NVTLLRVGKKNYYVVK 454


>gi|54296597|ref|YP_122966.1| tyrosyl-tRNA synthetase [Legionella pneumophila str. Paris]
 gi|81371093|sp|Q5X7H7|SYY_LEGPA RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|53750382|emb|CAH11776.1| tyrosyl-tRNA synthetase [Legionella pneumophila str. Paris]
          Length = 401

 Score =  380 bits (977), Expect = e-103,   Method: Composition-based stats.
 Identities = 98/389 (25%), Positives = 176/389 (45%), Gaps = 24/389 (6%)

Query: 26  ELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDP 84
           EL+    +G  +    G+D TA  LH GH   L  L   Q+ GH+ I L+G  T++IGDP
Sbjct: 23  ELEKKLQKGIPLKIKAGFDPTAPDLHLGHTVLLNKLRQFQQFGHEVIFLIGDFTAMIGDP 82

Query: 85  SFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREI 144
           + ++ +R  +  + + EN +  +      +          +  N  WL     +DL+R  
Sbjct: 83  TGKNVTRMPLSQETVLENAKTYQHQVFKILDPDKT----TVAFNSQWLNKFNAVDLIRLA 138

Query: 145 GSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWG 204
            +  +V RML  +    R    Q ++  EF Y +LQ YD V L  +    +++GG+DQ  
Sbjct: 139 ATH-TVARMLERDDFNKRYTTGQPIAIHEFLYPLLQGYDSVALKAD----VELGGTDQKF 193

Query: 205 NIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
           N++ G +L +         + +PL+    G  KM K+L   I +N+   +P   +    +
Sbjct: 194 NLLMGRELQKHYGFEPQVVMMTPLIEGLDGVKKMSKSLDNYIGINE---TPEQIFGKIMS 250

Query: 264 IDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAAT 321
           + D  +  +   L+     EI ++ +  L+GK   + K   A EI    H + +AE A  
Sbjct: 251 VSDELMWRYIDLLSFKTGKEIQQLKQSVLEGKNPRDVKIDFAKEIVARFHDQTQAELAHN 310

Query: 322 AAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINN 381
             +E F      + +  +S+   E    + L  L+ +     ST+E+ R +K  A+K++ 
Sbjct: 311 NFIERFQKGNIPEDLEELSLVIVE---PIALAQLLKQIDLTASTSESIRMVKQGAVKVDG 367

Query: 382 SIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
             IS+  L++ +       +  +  GK+ 
Sbjct: 368 DKISDPSLKLPI-----GKSYIIQVGKRR 391


>gi|104779737|ref|YP_606235.1| tyrosyl-tRNA synthetase [Pseudomonas entomophila L48]
 gi|95108724|emb|CAK13418.1| tyrosyl-tRNA synthetase [Pseudomonas entomophila L48]
          Length = 399

 Score =  380 bits (977), Expect = e-103,   Method: Composition-based stats.
 Identities = 99/409 (24%), Positives = 175/409 (42%), Gaps = 26/409 (6%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG    +     ++ L     +    G+D TA  LH GH   +  L   Q+ GH+ I
Sbjct: 10  LIKRGAEEVLVESELVEKLKRGEPLRIKAGFDPTAPDLHLGHTVLINKLRQFQELGHQVI 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T +IGDPS +  +R  +  +++ +N E  K      +     +    +  N TW
Sbjct: 70  FLIGDFTGMIGDPSGKSATRPPLTREQVLDNAETYKQQVFKILDPAKTE----VAFNSTW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +  +   D +R + S ++V RML  +    R    Q ++  EF Y ++Q YD V L  + 
Sbjct: 126 MDQLTPADFIR-LASQYTVARMLERDDFDKRYTSNQPIAIHEFLYPLVQGYDSVALKAD- 183

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G +L           +T PLL    G  KM K+L   + + + 
Sbjct: 184 ---VELGGTDQKFNLLMGRELQRSYGQEAQNIVTMPLLEGLDGVKKMSKSLGNYVGIQE- 239

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATEITT 308
             +P   +    +I D  +  + + L+   M EID+      +G    + K  +A EI  
Sbjct: 240 --APGVMYSKLVSIPDTLMWRYFELLSFRSMDEIDQFRADVEKGANPRDIKIKLAEEIVA 297

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
             HG E A  A  AA          + +P I ++  E    + +  ++ +AG   ++ +A
Sbjct: 298 RFHGEEAAANAHRAAGNRMKDGELPEDLPEIEVAAAE---DLPIAAVLNRAGLVKNSAQA 354

Query: 369 RRHLKSNAIKINNSIIS-NEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           R  L   A+K++ +++  +    +               GKK      L
Sbjct: 355 RDLLSGGAVKVDGAVVERDFMFALGATHVC-------QAGKKAFARVTL 396


>gi|302038034|ref|YP_003798356.1| tyrosyl-tRNA synthetase [Candidatus Nitrospira defluvii]
 gi|300606098|emb|CBK42431.1| Tyrosyl-tRNA synthetase [Candidatus Nitrospira defluvii]
          Length = 405

 Score =  380 bits (977), Expect = e-103,   Method: Composition-based stats.
 Identities = 105/417 (25%), Positives = 177/417 (42%), Gaps = 35/417 (8%)

Query: 11  ILSERGFIHQISNPRELDILC-----SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
            L  RG +  + NP EL+         Q  +    G+D TA  LH GH   +  L   Q 
Sbjct: 9   DLILRGIVE-VINPNELESRLVRSLKEQRPLRVKAGFDPTAPDLHLGHTVLIHKLKHFQD 67

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+ I L+G  T +IGDP+ R E+R  +  +++ EN +  +      +          +
Sbjct: 68  LGHQVIFLIGDFTGMIGDPTGRSETRVALSKEKVLENAKTYERQIFKILD----PHKTQV 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
             N  W+ ++   D L E+ + ++V RML  E    R    + +S  EF Y ++Q YD V
Sbjct: 124 EFNSRWMSAMT-ADGLIELSAHYTVARMLEREDFHKRYTEGKPISIHEFMYPLIQGYDSV 182

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGA 244
            L  +    +++GG+DQ  N++ G DL           +T PLL    G  KM K+L   
Sbjct: 183 ALKAD----VELGGTDQKFNLLMGRDLQRDYGQDAQVVITMPLLEGTDGVRKMSKSLGNY 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           I L      P   +    +I DA +  + + LTT  +       +++     +AK+ +A 
Sbjct: 239 IALE---DKPDEMFGKVMSISDALMQRYYELLTTEDLE------RVKTAHPMDAKQSLAE 289

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISIS------KDEVSRGMGLLTLIVK 358
            I    HG E   +A     + F         P   ++      KD V+  +GL+ L+ +
Sbjct: 290 LIVARYHGVEAGREARAMFQQKFQSREFPDQ-PDARVTLTSSDVKDVVAPSIGLVDLVAR 348

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            G   S +EARR +    ++IN    ++    I      +   + +  G++   +  
Sbjct: 349 TGLVPSKSEARRLIVQGGVEINEQKFTDANAAIP---LTAGKPLHMRVGRRKFAVAE 402


>gi|229592920|ref|YP_002875039.1| tyrosyl-tRNA synthetase [Pseudomonas fluorescens SBW25]
 gi|229364786|emb|CAY52795.1| tyrosyl-tRNA synthetase [Pseudomonas fluorescens SBW25]
          Length = 399

 Score =  380 bits (976), Expect = e-103,   Method: Composition-based stats.
 Identities = 104/408 (25%), Positives = 173/408 (42%), Gaps = 24/408 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG    +     ++ L     +    G+D TA  LH GH   +  L   Q+ GH+ I
Sbjct: 10  LIKRGAEELLVEAELIEKLKRGQPLRIKAGFDPTAPDLHLGHTVLINKLRQFQELGHQVI 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T +IGDPS +  +R  +  +++ +N E  K      +     +    +  N TW
Sbjct: 70  FLIGDFTGMIGDPSGKSATRPPLTREQVLDNAETYKTQVFKILDPAKTE----VAFNSTW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +  +   D +R + S ++V RML  +    R    Q ++  EF Y ++Q YD V L  + 
Sbjct: 126 MDQMGPADFIR-LTSQYTVARMLERDDFDKRYSTNQPIAIHEFLYPLVQGYDSVALRAD- 183

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G +L           LT PLL    G  KM K+L   + + + 
Sbjct: 184 ---VELGGTDQKFNLLMGRELQRAYGQEAQCILTMPLLEGLDGVKKMSKSLGNYVGIQE- 239

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEITT 308
             +P   +    +I DA +  + + L+   M EI+  R     G    + K  +A EI  
Sbjct: 240 --APGVMYGKLVSIPDALMWRYFELLSFRSMDEINALRADVEAGANPRDVKIKLAEEIVA 297

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
             HG E A  A  AA            +P I +S  E    M +  ++ KAG   ++  A
Sbjct: 298 RFHGDEAAANAHRAAGNRMKDGELPDDLPEIELSAAEA---MPIAAVLNKAGLVKNSAVA 354

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           R  L S  ++++  ++ +     +L             GKK      L
Sbjct: 355 RDLLGSGGVRVDGEVV-DRTFICEL-----GSTHVCQAGKKAFARITL 396


>gi|170723924|ref|YP_001751612.1| tyrosyl-tRNA synthetase [Pseudomonas putida W619]
 gi|169761927|gb|ACA75243.1| tyrosyl-tRNA synthetase [Pseudomonas putida W619]
          Length = 399

 Score =  380 bits (976), Expect = e-103,   Method: Composition-based stats.
 Identities = 97/409 (23%), Positives = 172/409 (42%), Gaps = 26/409 (6%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG    +     ++ L     +    G+D TA  LH GH   +  L   Q+ GH+ +
Sbjct: 10  LIKRGAEEVLVESELVEKLKRGQPLRIKAGFDPTAPDLHLGHTVLINKLRQFQELGHQVV 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T +IGDPS +  +R  +  +++ +N E  K      +     +    +  N TW
Sbjct: 70  FLIGDFTGMIGDPSGKSATRPPLTREQVLDNAETYKQQVFKILDPAKTE----VAFNSTW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +  +   D +R + S ++V RML  +    R    Q ++  EF Y ++Q YD V L  + 
Sbjct: 126 MDKLTPADFIR-LASQYTVARMLERDDFDKRYTTNQPIAIHEFLYPLVQGYDSVALKAD- 183

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G +L           +T PLL    G  KM K+L   + + + 
Sbjct: 184 ---VELGGTDQKFNLLMGRELQRAYGQEAQCIVTMPLLEGLDGVKKMSKSLGNYVGIQE- 239

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATEITT 308
             +P   +    +I D  +  + + L+   M EI++       G    + K  +A EI  
Sbjct: 240 --APGVMYSKLVSIPDTLMWRYFELLSFRSMDEIEQFRADVANGANPRDIKIKLAEEIVA 297

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
             HG E A  A  AA          + +P I ++  E    + +  ++ +AG   ++  A
Sbjct: 298 RFHGEEAAANAHRAAGNRMKEGELPEDLPEIEVAAAE---DLPIAAVLNRAGLVKNSAMA 354

Query: 369 RRHLKSNAIKINNSIIS-NEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           R  L   A+K++  ++  +    +               GKK      L
Sbjct: 355 RDLLNGGAVKVDGVVVERDFMFALGATHVC-------QAGKKAFARVKL 396


>gi|282850352|ref|ZP_06259731.1| tyrosine--tRNA ligase [Veillonella parvula ATCC 17745]
 gi|282579845|gb|EFB85249.1| tyrosine--tRNA ligase [Veillonella parvula ATCC 17745]
          Length = 402

 Score =  380 bits (976), Expect = e-103,   Method: Composition-based stats.
 Identities = 99/408 (24%), Positives = 176/408 (43%), Gaps = 30/408 (7%)

Query: 18  IHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPIS 72
           +  + N ++L     +       +   +G D TA  +H GH   L  L   Q+ GH+ + 
Sbjct: 15  VADLINEQDLVKKIEKSIKENKPLVVKLGLDPTAPDIHLGHTVPLRKLRLFQEFGHQVVI 74

Query: 73  LMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL 132
           ++GG T+ IGDP+ +  +R  +  +E+ +N E  K      +         ++ +N  WL
Sbjct: 75  VIGGFTARIGDPTGKSVTRPPLTKEEVLKNAETYKTQIFKVLD----PEKTIVRDNSEWL 130

Query: 133 CSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYD 192
            S+ + D+LR + S ++V RM+  +    R K  + +   EF Y ++Q +D V L  +  
Sbjct: 131 ESMNFADVLR-LASSYTVARMMERDDFSKRFKEGRPIGVHEFMYPLMQGHDSVALHAD-- 187

Query: 193 CRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEM 251
             ++ GG+DQ  N++ G  L E         +T PLL    G  KM K+L   I +++E 
Sbjct: 188 --VEFGGTDQTFNLLMGRHLQELEGQEPQVVITMPLLEGLDGIQKMSKSLGNYIGIDEE- 244

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAKKIIATEITT 308
             P   +    +I D  ++ +   +T + + E + MAK          +AK  +A  I  
Sbjct: 245 --PKEMYGKAMSIPDELMMRYFMLVTDMSIEEQEDMAKRLESGELHPRDAKMQLARTIVR 302

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
           + HG E A +A       F        +P   +        + +      AG   S  EA
Sbjct: 303 LYHGEEAALEAEEEFKRVFQQRAMPTDVPEYVMVAPI--EPIFVPQFCTDAGLTASNGEA 360

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           RR +K+ A K+N    + E L+++         + +  GK+  +    
Sbjct: 361 RRSIKAGAFKVNGEKYTEENLKLEDG-------MIVQVGKRKFVKIKF 401


>gi|146328884|ref|YP_001210187.1| tyrosyl-tRNA synthetase [Dichelobacter nodosus VCS1703A]
 gi|146232354|gb|ABQ13332.1| tyrosyl-tRNA synthetase [Dichelobacter nodosus VCS1703A]
          Length = 400

 Score =  380 bits (976), Expect = e-103,   Method: Composition-based stats.
 Identities = 94/392 (23%), Positives = 173/392 (44%), Gaps = 23/392 (5%)

Query: 29  ILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRD 88
            L +   +   +G D TA  LH GH   L  L  +Q  GH+ + L+G  T+ IGDPS ++
Sbjct: 29  KLKAGKTLRVKLGMDPTAPDLHFGHTVVLNKLRQIQDLGHQVVFLVGDFTAQIGDPSGKN 88

Query: 89  ESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFF 148
            +R  +  +++ EN +  +      +     +    +  N  W+  +   D++  + + +
Sbjct: 89  STRPPLSKEQVLENAKTYQEQVFKILDREKTE----IRFNSEWMDKMTASDMV-HLTAKY 143

Query: 149 SVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIIC 208
           +V R+L  +  + R    Q ++  EF Y + QAYD V L    +  +++GG+DQ  N++ 
Sbjct: 144 TVARILERDDFQKRYHNHQPIAVHEFLYSLTQAYDSVAL----EADIELGGTDQKFNLLV 199

Query: 209 GIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDA 267
           G D+           LT P+L    G  KM K+L   I + +        +    +I D 
Sbjct: 200 GRDIQREYGLSPQAILTMPILEGLDGVQKMSKSLGNYIGIFEPAA---EMFGKIMSISDE 256

Query: 268 DVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAATAAME 325
            +  + + L+   ++EID +      G    + K  +A E+    H    A  A  A ++
Sbjct: 257 LMWRYFELLSMRSLAEIDALKASVASGANPRDIKFELALELVARFHDDASARAAQEAFVQ 316

Query: 326 CFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIIS 385
            F  +     +  ++I+  E    + +  L+  AG  +ST+E  R +K  A+KI+   I 
Sbjct: 317 RFAKNEIPDDLEELTITASE---PLPIANLLKDAGLVSSTSEGLRMIKQGAVKIDGQRID 373

Query: 386 NEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           ++ LQ     F +  +  +  GK+      L 
Sbjct: 374 DKNLQ-----FSAGFSGVIQVGKRRMAKVSLA 400


>gi|13357674|ref|NP_077948.1| tyrosyl tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           700970]
 gi|170761932|ref|YP_001752200.1| tyrosyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           27815]
 gi|171920426|ref|ZP_02691049.2| tyrosyl-tRNA synthetase [Ureaplasma parvum serovar 1 str. ATCC
           27813]
 gi|183508734|ref|ZP_02689892.2| tyrosyl-tRNA synthetase [Ureaplasma parvum serovar 14 str. ATCC
           33697]
 gi|186701925|ref|ZP_02554437.2| tyrosyl-tRNA synthetase [Ureaplasma parvum serovar 6 str. ATCC
           27818]
 gi|81549680|sp|Q9PR27|SYY_UREPA RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|189029780|sp|B1AIA6|SYY_UREP2 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|11271047|pir||H82931 tyrosyl tRNA synthetase UU117 [imported] - Ureaplasma urealyticum
 gi|6899074|gb|AAF30523.1|AE002112_4 tyrosyl tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           700970]
 gi|168827509|gb|ACA32771.1| tyrosyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           27815]
 gi|171902871|gb|EDT49160.1| tyrosyl-tRNA synthetase [Ureaplasma parvum serovar 1 str. ATCC
           27813]
 gi|182675661|gb|EDT87566.1| tyrosyl-tRNA synthetase [Ureaplasma parvum serovar 14 str. ATCC
           33697]
 gi|186700667|gb|EDU18949.1| tyrosyl-tRNA synthetase [Ureaplasma parvum serovar 6 str. ATCC
           27818]
          Length = 415

 Score =  380 bits (976), Expect = e-103,   Method: Composition-based stats.
 Identities = 123/417 (29%), Positives = 216/417 (51%), Gaps = 20/417 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            +  L  R  I+ I+N  +L     +     Y+G+D +A SLH G+   +MLL   +   
Sbjct: 4   LIKDLKARNLINNITNEEKLIKALEKNK-GIYVGFDPSADSLHLGNYIMIMLLKRFRLYN 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
            K ++L+GG T +IGDPS +   R ++    +++NI KIK     F       T++ ++N
Sbjct: 63  IKTLALVGGATGMIGDPSGKSAERNLLDKTILEKNIAKIKFQLEKF-------TNSQVIN 115

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  +  ++ ++D LR++G   ++N +L  E + SRL     +S+ EF+Y +LQ YDF++L
Sbjct: 116 NYVFYENMTFLDFLRDVGKLININYLLEKEIINSRLS--VGISYTEFSYNLLQGYDFLQL 173

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK--LFALTSPLLTTASGTKMGKTLSGAI 245
            KN +  +Q GGSDQWGNI  GI++  +          LT  LLT + G K GK+  GAI
Sbjct: 174 YKNDNIAIQAGGSDQWGNITTGIEMIRKNLGDDNIACGLTINLLTNSEGKKFGKSEKGAI 233

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIA 303
           +L++  ++ Y  +Q+  N  DADV      LT + + EI ++ +          A+K +A
Sbjct: 234 YLDENKSTVYEMYQFLINQSDADVEKLLNFLTLIDVEEIKKIMQAHKNNPALRVAQKALA 293

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVS------RGMGLLTLIV 357
             +   +HG+++ E+A   +   F+ SI + +   + I+   +         + ++ L+ 
Sbjct: 294 KAVVVDIHGQQKYEQALHISEVLFNGSISTLNQEELEIAIKSLPATKLDKDEIKIIDLLN 353

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            A  ++S   AR  L + +I IN+  I++E   +K QD  +     +  GK+N+ + 
Sbjct: 354 LANISSSNRIARDFLNTGSILINDIKINDENFLVKKQDAINQKFSIIRKGKRNYFLI 410


>gi|239617872|ref|YP_002941194.1| tyrosyl-tRNA synthetase [Kosmotoga olearia TBF 19.5.1]
 gi|239506703|gb|ACR80190.1| tyrosyl-tRNA synthetase [Kosmotoga olearia TBF 19.5.1]
          Length = 397

 Score =  380 bits (976), Expect = e-103,   Method: Composition-based stats.
 Identities = 105/410 (25%), Positives = 180/410 (43%), Gaps = 26/410 (6%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L IL  R  +  IS    ++ L     +   +G D +   LH GH   L  L   Q  GH
Sbjct: 8   LQILK-RNSVSLISEEELIERLKLGRPLRVKLGVDPSRPDLHLGHAVVLRKLREFQDLGH 66

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
             I ++G  T+ IGDPS R ++R M+  +E ++N           +     +    +  N
Sbjct: 67  HVILIIGDFTARIGDPSGRSKTRPMLSKEEAKQNAITYSQQAFKILDRDKTE----IKFN 122

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL  + + D++R + + ++V RML       R K  + +S  EF Y + QAYD V + 
Sbjct: 123 SEWLDGMSFEDVIR-LSAKYTVARMLERNDFEKRYKNNEPISIAEFLYPLAQAYDSVVVK 181

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWL 247
            +    +++GG DQ+ N +    + E         LT PL+    G  KM K+    +  
Sbjct: 182 AD----VEIGGDDQFFNFVVARKIQEEYGLQPQVILTMPLIEGTDGNLKMSKSYGNYVAF 237

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKIIAT 304
                 P   +    +I D  ++ + + LT +P   I   +R  K +     + K ++A 
Sbjct: 238 E---DPPEEMFGKLMSIPDTLIIKYMRLLTDIPEERILQYERDIKSRKINPRDVKMLLAF 294

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           EIT   HG E A +A    ++ F        +P I + + E+S    L+ L+VK    +S
Sbjct: 295 EITRFFHGEEAAVRARENFIKVFRKKELPSEIPEIKVKESELS----LVDLMVKYANISS 350

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +EARR +    +++NN++I +   ++ + + D      L  GK+     
Sbjct: 351 KSEARRLISQGGVRLNNTVIKDIHAKVAVSNGD-----ILRIGKRRFFKI 395


>gi|294507638|ref|YP_003571696.1| tyrosyl-tRNA synthetase [Salinibacter ruber M8]
 gi|294343966|emb|CBH24744.1| tyrosyl-tRNA synthetase [Salinibacter ruber M8]
          Length = 412

 Score =  380 bits (976), Expect = e-103,   Method: Composition-based stats.
 Identities = 95/407 (23%), Positives = 172/407 (42%), Gaps = 23/407 (5%)

Query: 15  RGFIHQISNPRELDILCSQG-----VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
           RG   +I    EL             +T  +G D +   LH GH   L  L   Q  GH+
Sbjct: 15  RGA-EEIVPEDELAEKLRTSRETDTPLTVKLGCDPSRPDLHLGHTVVLRKLRQFQDFGHR 73

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
            + ++G  T +IGDPS R ++R  +  +E +E+ +      +  +          +  N 
Sbjct: 74  AVLIVGDFTGMIGDPSGRSKTRPQLTLEETREHGQSYYEQATRVLD----PNKTEIRYNS 129

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
            WL  +++ D++ E+ +  +V +ML  +    R +  Q +S  EF Y + QA D V +  
Sbjct: 130 EWLDEMRFSDVI-ELAAQQTVAQMLKRDDFNERYEAGQPISLHEFLYPLAQARDSVHI-- 186

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLN 248
             +  +++GG+DQ  N++    L E         +  PLL    G+ KM K+L  AI + 
Sbjct: 187 --EADVELGGTDQRFNLLLARRLQEANDQAAQVCMMLPLLEGTDGSDKMSKSLDNAIGIA 244

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITT 308
           +   +P + +    ++ D  +  + + +T +P  ++ ++ +        AK  +A  I  
Sbjct: 245 E---APEDMYGKTMSVPDDLIYRYVELVTDIPTEQLPKVKRFAESNPRAAKAQLARRIVE 301

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
           M HG E A++A     +          +P  +    E    +GLL L+  A    S +E 
Sbjct: 302 MYHGEEAADRAEEHFEQTVVEGGVPDDLPEYT-PTPEDGAEVGLLNLMRHADLTDSNSEG 360

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           RR ++  A+ I+   +++    I   D        L  GK+      
Sbjct: 361 RRMIEQGAVTIDEEKVTDTGRYI---DVAKEAPFVLQVGKRRFARIR 404


>gi|83815043|ref|YP_445743.1| tyrosyl-tRNA synthetase [Salinibacter ruber DSM 13855]
 gi|115305822|sp|Q2S238|SYY_SALRD RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|83756437|gb|ABC44550.1| tyrosyl-tRNA synthetase [Salinibacter ruber DSM 13855]
          Length = 412

 Score =  380 bits (976), Expect = e-103,   Method: Composition-based stats.
 Identities = 95/407 (23%), Positives = 172/407 (42%), Gaps = 23/407 (5%)

Query: 15  RGFIHQISNPRELDILCSQG-----VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
           RG   +I    EL             +T  +G D +   LH GH   L  L   Q  GH+
Sbjct: 15  RGA-EEIVPEDELAEKLRTSRETDTPLTVKLGCDPSRPDLHLGHTVVLRKLRQFQDFGHR 73

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
            + ++G  T +IGDPS R ++R  +  +E +E+ +      +  +          +  N 
Sbjct: 74  AVLIVGDFTGMIGDPSGRSKTRPQLTLEETREHGQSYYEQATRVLD----PNKTEIRYNS 129

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
            WL  +++ D++ E+ +  +V +ML  +    R +  Q +S  EF Y + QA D V +  
Sbjct: 130 EWLDEMRFSDVI-ELAAQQTVAQMLKRDDFNERYEAGQPISLHEFLYPLAQARDSVHI-- 186

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLN 248
             +  +++GG+DQ  N++    L E         +  PLL    G+ KM K+L  AI + 
Sbjct: 187 --EADVELGGTDQRFNLLLARRLQEANDQAAQVCMMLPLLEGTDGSDKMSKSLDNAIGIA 244

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITT 308
           +   +P + +    ++ D  +  + + +T +P  ++ ++ +        AK  +A  I  
Sbjct: 245 E---APEDMYGKTMSVPDDLIYRYVELVTDIPTEQLPKVKQFAESNPRAAKAQLARRIVE 301

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
           M HG E A++A     +          +P  +    E    +GLL L+  A    S +E 
Sbjct: 302 MYHGEEAADRAEEHFEQTVVEGGVPDDLPEYT-PTPEDGAEVGLLNLMRHADLTDSNSEG 360

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           RR ++  A+ I+   +++    I   D        L  GK+      
Sbjct: 361 RRMIEQGAVTIDEEKVTDTGRYI---DVAEEAPFVLQVGKRRFARIR 404


>gi|171060119|ref|YP_001792468.1| tyrosyl-tRNA synthetase [Leptothrix cholodnii SP-6]
 gi|170777564|gb|ACB35703.1| tyrosyl-tRNA synthetase [Leptothrix cholodnii SP-6]
          Length = 413

 Score =  379 bits (975), Expect = e-103,   Method: Composition-based stats.
 Identities = 102/410 (24%), Positives = 171/410 (41%), Gaps = 30/410 (7%)

Query: 15  RGFIHQISNPRELDILCSQG----VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           RG    +     L  L         +   +G D TA  +H GH   L  L  LQ  GH  
Sbjct: 27  RGCEELLPEADWLKKLVRSEASGTPLRIKLGLDPTAPDIHLGHTVVLNKLRQLQDLGHTV 86

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           I L+G  TS+IGDPS R+ +R  + +++I+ N E      S  +     +    +  N  
Sbjct: 87  IFLIGDFTSMIGDPSGRNTTRPPLTAEQIKLNAETYYRQASLVLDPARTE----IRYNSE 142

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           W   +    ++  + S ++V RM+       R     S++  EF Y ++Q YD V L  +
Sbjct: 143 WCDPLGARGMIA-LASRYTVARMMERNDFHERFHAGTSIAVHEFLYPLMQGYDSVALKSD 201

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNK 249
               L++GG+DQ  N++ G  L           LT PLL    G  KM K+    I +++
Sbjct: 202 ----LELGGTDQKFNLLMGRHLQAEYGQEPQCILTMPLLVGLDGVEKMSKSKGNYIGISE 257

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIATEIT 307
                 + +    +I D  + S+   L+      I  +      G+   +AK ++A EIT
Sbjct: 258 AAN---DMFAKLLSISDTLMWSYFTLLSFRSEEAIAALKAEVDAGRNPKDAKVLLAKEIT 314

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
              HG   A+ A                +P +S+S       +G+  L+ +A    S++E
Sbjct: 315 ARFHGAAAADAAEQDFQNR-AKGGIPDDLPQVSLS----GAPLGIGALLKQANLVPSSSE 369

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           A R ++   ++I+  +IS++ L++        G   L  GK+      L 
Sbjct: 370 AMRLIEQGGVRIDGGVISDKGLKLAA------GRYVLQVGKRKFAQVDLS 413


>gi|94681057|ref|NP_001035526.1| tyrosyl-tRNA synthetase, mitochondrial precursor [Homo sapiens]
 gi|50401709|sp|Q9Y2Z4|SYYM_HUMAN RecName: Full=Tyrosyl-tRNA synthetase, mitochondrial; AltName:
           Full=Tyrosine--tRNA ligase; Short=TyrRS; Flags:
           Precursor
 gi|10436334|dbj|BAB14806.1| unnamed protein product [Homo sapiens]
 gi|15990482|gb|AAH15625.1| Tyrosyl-tRNA synthetase 2, mitochondrial [Homo sapiens]
 gi|119608923|gb|EAW88517.1| tyrosyl-tRNA synthetase 2 (mitochondrial), isoform CRA_a [Homo
           sapiens]
 gi|119608924|gb|EAW88518.1| tyrosyl-tRNA synthetase 2 (mitochondrial), isoform CRA_a [Homo
           sapiens]
 gi|123992774|gb|ABM83989.1| tyrosyl-tRNA synthetase 2 (mitochondrial) [synthetic construct]
 gi|123999518|gb|ABM87314.1| tyrosyl-tRNA synthetase 2 (mitochondrial) [synthetic construct]
          Length = 477

 Score =  379 bits (975), Expect = e-103,   Method: Composition-based stats.
 Identities = 136/431 (31%), Positives = 205/431 (47%), Gaps = 28/431 (6%)

Query: 13  SERGFIHQISNPR----ELDILCSQG----VVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
             RG             EL  L  +G      T Y G+D TA SLH GHL  L+ LF LQ
Sbjct: 43  KARGLFKDFFPETGTKIELPELFDRGTASFPQTIYCGFDPTADSLHVGHLLALLGLFHLQ 102

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI-------EKIKGIFSSFIKYG 117
           + GH  I+L+GG T+ +GDPS R + R  + ++ ++ N        E +          G
Sbjct: 103 RAGHNVIALVGGATARLGDPSGRTKEREALETERVRANARALRLGLEALAANHQQLFTDG 162

Query: 118 TGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYM 177
                  +L+N  W      +D L  +G  F +  +LS +SV+ RLK  + +S  EF Y 
Sbjct: 163 RSWGSFTVLDNSAWYQKQHLVDFLAAVGGHFRMGTLLSRQSVQLRLKSPEGMSLAEFFYQ 222

Query: 178 ILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
           +LQAYDF  L + Y CR+Q+GGSDQ GNI+ G +   +L    +F +T PL+T+ +G K+
Sbjct: 223 VLQAYDFYYLFQRYGCRVQLGGSDQLGNIMSGYEFINKLTGEDVFGITVPLITSTTGAKL 282

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI-- 295
           GK+   A+WLN++ TSP+  +Q++    D  V  + K  T LP+ EID + +L  KE   
Sbjct: 283 GKSAGNAVWLNRDKTSPFELYQFFVRQPDDSVERYLKLFTFLPLPEIDHIMQLHVKEPER 342

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM----------PTISISKDE 345
              +K +A E+T +VHGRE  + A       +  SI +  +               S+  
Sbjct: 343 RGPQKRLAAEVTKLVHGREGLDSAKRCTQALYHSSIDALEVMSDQELKELFKEAPFSEFF 402

Query: 346 VSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEK-LQIKLQDFDSTGNIKL 404
           +  G  +L    KA          R +    + IN+  ++N + + I  Q     G   L
Sbjct: 403 LDPGTSVLDTCRKANAIPDGPRGYRMITEGGVSINHQQVTNPESVLIVGQHILKNGLSLL 462

Query: 405 SFGKKNHIICH 415
             GK+N  I  
Sbjct: 463 KIGKRNFYIIK 473


>gi|55667251|ref|XP_528727.1| PREDICTED: tyrosyl-tRNA synthetase, mitochondrial isoform 2 [Pan
           troglodytes]
          Length = 477

 Score =  379 bits (975), Expect = e-103,   Method: Composition-based stats.
 Identities = 136/431 (31%), Positives = 206/431 (47%), Gaps = 28/431 (6%)

Query: 13  SERGFIHQISNPR----ELDILCSQG----VVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
             RG             EL  L  +G      T Y G+D TA SLH GHL  L+ LF LQ
Sbjct: 43  KARGLFKDFFPETGTKIELPELFDRGTASFPQTIYCGFDPTADSLHVGHLLALLGLFHLQ 102

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI-------EKIKGIFSSFIKYG 117
           + GH  I+L+GG T+ +GDPS R + R  + ++ ++ N        E +          G
Sbjct: 103 RAGHNVIALVGGATARLGDPSGRTKEREALETERVRANARALRLGLEALAANHQQLFTDG 162

Query: 118 TGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYM 177
                  +L+N  W    + +D L  +G  F +  +LS +SV+ RLK  + +S  EF Y 
Sbjct: 163 RSWGSFTVLDNSAWYQKQRLVDFLAAVGGHFRMGTLLSRQSVQLRLKSPEGMSLAEFFYQ 222

Query: 178 ILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
           +LQAYDF  L + Y CR+Q+GGSDQ GNI+ G +   +L    +F +T PL+T+ +G K+
Sbjct: 223 VLQAYDFYYLFQRYGCRVQLGGSDQLGNIMSGYEFINKLTGEDVFGITVPLITSTTGAKL 282

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI-- 295
           GK+   A+WLN++ TSP+  +Q++    D  V  + K  T LP+ EID + +L  KE   
Sbjct: 283 GKSAGNAVWLNRDKTSPFELYQFFVRQPDDSVERYLKLFTFLPLPEIDHIMQLHVKEPER 342

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM----------PTISISKDE 345
              +K +A E+T +VHGRE  + A       +  SI +  +               S+  
Sbjct: 343 RGPQKRLAAEVTKLVHGREGLDSAKRCTQALYHSSIDALEVMSDQELKELFKEAPFSEFF 402

Query: 346 VSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEK-LQIKLQDFDSTGNIKL 404
           +  G  +L    KA          R +    + IN+  ++N + + I  Q     G   L
Sbjct: 403 LDPGTSVLDTCRKANAIPDGPRGYRMITEGGVSINHQQVTNPESVLIVGQHILKNGLSLL 462

Query: 405 SFGKKNHIICH 415
             GK+N  I  
Sbjct: 463 KIGKRNFYIIK 473


>gi|255029464|ref|ZP_05301415.1| tyrosyl-tRNA synthetase [Listeria monocytogenes LO28]
          Length = 285

 Score =  379 bits (975), Expect = e-103,   Method: Composition-based stats.
 Identities = 126/286 (44%), Positives = 169/286 (59%), Gaps = 5/286 (1%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG I+Q ++   L     +  ++ Y G D +  S+H GHL   M+L   Q  
Sbjct: 2   NIIDELEWRGAIYQQTDEEGLRKWVEEKQISLYCGIDPSGDSMHIGHLIPFMILRRFQNA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI L+GG T  IGDPS + E R++   ++I +N+E ++        +  G + A M+
Sbjct: 62  GHRPIILVGGATGTIGDPSGKKEERKLQSMEQISKNVESLRVQLGKIFDF-EGNSAASMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   +  +D LR+ G  F+VN MLS + V SRL  E  +SF EF Y ILQA DF  
Sbjct: 121 NNYDWTKDVSILDFLRDYGKEFNVNTMLSKDIVASRL--EVGISFTEFAYQILQAMDFNH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSGA 244
           L +  DCRLQ+GGSDQWGNI  G+DL  + +    K F LT PLLT A GTK GK+  GA
Sbjct: 179 LYEFNDCRLQIGGSDQWGNITAGLDLIRKKQGENAKAFGLTIPLLTKADGTKFGKSEGGA 238

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL 290
           IWLN E T+PY F+Q+W N DD DVV + K  T L  +EID +AK 
Sbjct: 239 IWLNPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLTEAEIDELAKQ 284


>gi|109896842|ref|YP_660097.1| tyrosyl-tRNA synthetase [Pseudoalteromonas atlantica T6c]
 gi|109699123|gb|ABG39043.1| tyrosyl-tRNA synthetase [Pseudoalteromonas atlantica T6c]
          Length = 399

 Score =  379 bits (975), Expect = e-103,   Method: Composition-based stats.
 Identities = 100/420 (23%), Positives = 177/420 (42%), Gaps = 24/420 (5%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  ++S F  +  +RG    +     +  L     +    G+D TA  LH GH   +  L
Sbjct: 1   MADWQSAFAEL--QRGAEEILLEEELIAKLKEGKPLKIKAGFDPTAPDLHLGHTVLINKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+ I L+G  T +IGDP+ ++ +R+ +  +++  N E  K      +      
Sbjct: 59  RSFQQLGHEVIFLIGDFTGMIGDPTGKNVTRKPLTREDVLANAETYKEQVFKILDPAKT- 117

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N  W+  +    +++ + S  +V RML  +  + R    Q ++  EF Y ++Q
Sbjct: 118 ---TIRFNSEWMEGLGASGMIK-LASSQTVARMLERDDFKKRYANGQPIAIHEFLYPLVQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGK 239
            +D V L  +    +++GG+DQ  N++ G +L +         L  PLL    G  KM K
Sbjct: 174 GWDSVALESD----VELGGTDQRFNLLMGRELQKGQGQRPQTVLMMPLLEGLDGVQKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINE 297
           +L   I +     SP + +    +I D  +  +   L+   + EI    +    G    +
Sbjct: 230 SLGNYIGIT---DSPSDMFGKIMSISDDLMWRYYDLLSFKAIEEIALYKEQVAGGTNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K  +A EI    H    AE A    ++ F  +     MP  +      + GM +  L+ 
Sbjct: 287 IKIALAKEIIARFHDDAAAEAAHHEFIQRFQKNAIPDEMPEFTFEAG--AEGMAVANLLK 344

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           +A    ST+EA R +K  A+K++   ++++K       F S        GK+      L 
Sbjct: 345 EAALVASTSEAMRMIKQGAVKMDGEKVADQKAI-----FTSLQEAVFQVGKRKFARVTLS 399


>gi|54293559|ref|YP_125974.1| tyrosyl-tRNA synthetase [Legionella pneumophila str. Lens]
 gi|81369183|sp|Q5WYX4|SYY_LEGPL RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|53753391|emb|CAH14844.1| tyrosyl-tRNA synthetase [Legionella pneumophila str. Lens]
          Length = 401

 Score =  379 bits (974), Expect = e-103,   Method: Composition-based stats.
 Identities = 96/389 (24%), Positives = 176/389 (45%), Gaps = 24/389 (6%)

Query: 26  ELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDP 84
           EL+    +G  +    G+D TA  LH GH   L  L   Q+ GH+ I L+G  T++IGDP
Sbjct: 23  ELEKKLQKGIPLKIKAGFDPTAPDLHLGHTVLLNKLRQFQQFGHEVIFLIGDFTAMIGDP 82

Query: 85  SFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREI 144
           + ++ +R  +  + + EN +  +      +          +  N  WL     +DL+R  
Sbjct: 83  TGKNVTRMPLSQETVLENAKTYQHQVFKILDPDKT----TVAFNSQWLNKFNAVDLIRLA 138

Query: 145 GSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWG 204
            +  +V RML  +    R    Q ++  EF Y +LQ YD V L  +    +++GG+DQ  
Sbjct: 139 ATH-TVARMLERDDFNKRYTTGQPIAIHEFLYPLLQGYDSVALKAD----VELGGTDQKF 193

Query: 205 NIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
           N++ G +L +         + +PL+    G  KM K+L   I +N+   +    +    +
Sbjct: 194 NLLMGRELQKHYGFEPQVVMMTPLIEGLDGVKKMSKSLDNYIGINE---TSEQMFGKIMS 250

Query: 264 IDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAAT 321
           + D  +  +   L+     EI ++ +  L+GK   + K   A EI    H + +AE A  
Sbjct: 251 VSDELMWRYIDLLSFKTGKEIQQLKQSVLEGKNPRDVKIDFAKEIVARFHDQTQAEFAHN 310

Query: 322 AAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINN 381
             +E F      + +  +S+    ++  + L  L+ +     ST+E+ R +K  A+K++ 
Sbjct: 311 KFIERFQKGNIPEDLEELSLV---IAEPIALAQLLKQIDLTASTSESIRMVKQGAVKVDG 367

Query: 382 SIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
             IS+  L++ +       +  +  GK+ 
Sbjct: 368 DKISDPSLKLPI-----GKSYIIQVGKRR 391


>gi|315646148|ref|ZP_07899268.1| tyrosyl-tRNA synthetase [Paenibacillus vortex V453]
 gi|315278347|gb|EFU41663.1| tyrosyl-tRNA synthetase [Paenibacillus vortex V453]
          Length = 417

 Score =  379 bits (973), Expect = e-103,   Method: Composition-based stats.
 Identities = 97/417 (23%), Positives = 185/417 (44%), Gaps = 28/417 (6%)

Query: 11  ILSERGFIHQISNPRELD-----ILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
            +  RG +  I    E+       + +   +   +G D +A  LH GH   L  L   Q+
Sbjct: 19  EVISRGAVE-IVPEDEMKYKVMLSVVTGEPLRVKLGMDPSAPDLHVGHTVVLQKLRQFQE 77

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+   ++G  T  IGDP+ + E+R+ +  +E++ + E  K      +     K    +
Sbjct: 78  LGHQVQLIIGDFTGRIGDPTGKSETRKQLSEEEVKHHAETYKKQIYKVLNPDKTK----I 133

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
             N  WL  + + +++  + +  +V RML  +    R +    +S  EF Y ++Q  D V
Sbjct: 134 YYNSEWLAPMTFAEVV-SLSAKVTVARMLERDDFTKRYQNGLPISIHEFFYPLMQGMDSV 192

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGA 244
            L  +    +++GG+DQ  N++ G  L +   T    A+T P++    G  KM K+L   
Sbjct: 193 ALKTD----VELGGTDQKFNLLMGRTLQKEYGTEAQVAITMPIIEGLDGVQKMSKSLGNY 248

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT---LPMSEIDRMAKLQGKEINEAKKI 301
           I +++E   P   +    ++ D  ++ + +  T      +++++   +       +AK  
Sbjct: 249 IGIDEE---PNEIYGKTMSVPDELMLKYYRLATDARSEDLNKLETGLQDGSVHPRDAKMG 305

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAG 360
           +A  +  M HG E A+ A    +  F      + +    ++++ +  G +GL+ L+ + G
Sbjct: 306 LAHTLVRMYHGMEAADAAQQHFVTVFQQHALPEEIEDFVVAEETLENGKIGLIKLLTQLG 365

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           FA S  EARR ++  A+K N    ++   +I  QD D      +  GK+      L 
Sbjct: 366 FAASNAEARRSIQQGAVKWNEEKWTDIYGEITPQDGD-----IIQVGKRKFARLKLS 417


>gi|169836866|ref|ZP_02870054.1| tyrosyl-tRNA synthetase [candidate division TM7 single-cell isolate
           TM7a]
          Length = 407

 Score =  379 bits (973), Expect = e-103,   Method: Composition-based stats.
 Identities = 107/411 (26%), Positives = 184/411 (44%), Gaps = 32/411 (7%)

Query: 15  RGFIHQISNPRELDILCSQG-----VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
           RG   +I N  E      +       +   +G D T S LH GH   L  L   Q  GH 
Sbjct: 19  RGC-DEIINENEFKKKLEKSISTNTPLRVKLGIDPTGSDLHLGHAVPLRKLKQFQDLGHD 77

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
              L+G  T  IGDP+ + E+R+M+  +++ ENI+         +          ++ N 
Sbjct: 78  VFFLIGTFTGRIGDPTGKSETRKMLSEEQVMENIKTYLDQVKLILDLD----KINVVYNA 133

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
            WL  +   D L  + S F+V++M+S E    RL   + +S +EF Y ILQ YD VEL  
Sbjct: 134 DWLEKLSLSDALNLL-SQFTVSQMISREDFSKRLSENKPVSLIEFMYPILQGYDSVELHA 192

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLN 248
           +    +++G ++Q  N++ G DL +     +   +  P+L    G  KM K+L   I + 
Sbjct: 193 D----VELGATEQKFNLLRGRDLQKNFGQEQQICMIMPILVGLDGVEKMSKSLGNYIGV- 247

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAKKIIATE 305
               +P + +    +I D  + ++   +T +P  +I+ +            EAKK +  E
Sbjct: 248 --KDTPNDMFGKVMSISDELMENYYTMITDVPFEKIEEIKAQIADGSLHPMEAKKQLGAE 305

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV-KAGFATS 364
           +  + +G E A++A       F     +  +P + +   EV    G++ L+V + G   +
Sbjct: 306 VVKIYYGEEAAKEARDWFENVFSKRNLNVDLPEVELEYKEV----GIIDLLVKETGLMKT 361

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           T+EARR ++    KIN+  I + K  + L+       + +  GKK  +   
Sbjct: 362 TSEARRLIQQGGFKINDEPIKDVKATVVLE-----SGMIVRAGKKKIVKVK 407


>gi|260771187|ref|ZP_05880114.1| tyrosyl-tRNA synthetase [Vibrio furnissii CIP 102972]
 gi|260613784|gb|EEX38976.1| tyrosyl-tRNA synthetase [Vibrio furnissii CIP 102972]
 gi|315179207|gb|ADT86121.1| tyrosyl-tRNA synthetase [Vibrio furnissii NCTC 11218]
          Length = 395

 Score =  379 bits (973), Expect = e-103,   Method: Composition-based stats.
 Identities = 97/419 (23%), Positives = 174/419 (41%), Gaps = 28/419 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M + ++    I  +RG    I     +  L     +   +G D TA  +H GH   L  L
Sbjct: 1   MASIEAALAEI--KRGVEELIPEEELIAKLKEGRPLRIKLGADPTAPDIHLGHTVILNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GH    L+G  T ++GDP+ ++ +R  +  +++  N E  K      +     K
Sbjct: 59  RTFQDLGHDVTFLIGDFTGMVGDPTGKNTTRPPLTREDVLRNAETYKQQVFKILDPAKTK 118

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N  WL  +    ++R + +  +V RML  +  + R    Q ++  EF Y +LQ
Sbjct: 119 ----IQFNSEWLSQLGAEGMIR-LAANQTVARMLERDDFKKRYANGQPIAIHEFMYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGK 239
            YD V +    +  +++GG+DQ  N++ G +L +         L  PLL    G  KM K
Sbjct: 174 GYDSVAM----ETDVELGGTDQKFNLLMGRELQKSNGQKPQVVLMMPLLVGLDGEKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINE 297
           +    I +++   +P   +    +I D  + S+ + L+  P+ E+ +       G    +
Sbjct: 230 SAHNYIGVSE---APSEMFGKIMSISDDLMWSYYELLSFRPLEELQQFKDDVANGTNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++A EI    H   +A+ A    +  F      + M      + E   G+ +  L+ 
Sbjct: 287 IKILLAKEIIARFHTEADADAAEQEFINRFQKGAMPEEM-----PEFEFEAGIAIANLLK 341

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +AG   ST++A R +K  A+K +   + + KL          G      GK+      +
Sbjct: 342 EAGLVGSTSDAMRMIKQGAVKQDGEKLDDAKLVPAA------GTAVYQVGKRKFARVTV 394


>gi|262380680|ref|ZP_06073833.1| tyrosyl-tRNA synthetase [Acinetobacter radioresistens SH164]
 gi|262297628|gb|EEY85544.1| tyrosyl-tRNA synthetase [Acinetobacter radioresistens SH164]
          Length = 410

 Score =  378 bits (972), Expect = e-103,   Method: Composition-based stats.
 Identities = 102/420 (24%), Positives = 182/420 (43%), Gaps = 28/420 (6%)

Query: 6   SDFL--SI---LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           S+FL       L +RG    IS    L  L     +    G+D TA  LH GH   +  L
Sbjct: 8   SNFLPAEEQLALIQRGTHEIISEEDLLKKLKENRPLKVKAGFDPTAPDLHLGHTVLINKL 67

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GH    L+G  T++IGDP+ +  +R  +  +++ EN +  +      ++    K
Sbjct: 68  KVFQDLGHDVYFLIGDYTAMIGDPTGKSATRPPLSREQVLENAKTYQEQVFKILEPNKTK 127

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               ++ N  W  S    DL+ ++ S  +V RML  +    R   +Q ++  EF Y ++Q
Sbjct: 128 ----VVFNSEWFASKTAADLI-QLASQQTVARMLERDDFTKRYSSQQPIAIHEFLYPLVQ 182

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGK 239
            YD + L    +  +++GG+DQ  N++ G  L  R        +T P+L    G  KM K
Sbjct: 183 GYDSIAL----EADVELGGTDQTFNLLMGRTLQGRYHQEPQVCITVPILEGLDGVQKMSK 238

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINE 297
           +L   I +     +P   +Q   ++ D+ +  + + L+   M EI       ++G+   E
Sbjct: 239 SLGNYIGV---FDAPGAMYQKVLSMPDSLIERYFELLSFKSMPEIQDLLKEMVEGRNPQE 295

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K+I+A E+    HG E A  A   A          +  P ++IS+ E    + + +++ 
Sbjct: 296 IKRILALELVERFHGSEAAANAHKGAGNIITEGELPEGTPEVTISRAEFGGEIFIASILR 355

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            AG   +  +A+  +   A+K++  ++ +    +K           +  GKK   I  + 
Sbjct: 356 TAGLTKNAAQAKDAVARGAVKVDWEVV-DADFSVKE-----NKTYIIQAGKK--AIAKVT 407


>gi|120553631|ref|YP_957982.1| tyrosyl-tRNA synthetase [Marinobacter aquaeolei VT8]
 gi|120323480|gb|ABM17795.1| tyrosyl-tRNA synthetase [Marinobacter aquaeolei VT8]
          Length = 400

 Score =  378 bits (972), Expect = e-103,   Method: Composition-based stats.
 Identities = 95/406 (23%), Positives = 177/406 (43%), Gaps = 22/406 (5%)

Query: 15  RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLM 74
           RG    I     ++ L     +    G+D TA  LH GH   +  L   Q  GH+ I L+
Sbjct: 13  RGIDELIPEEDLVEKLKEGRPLRVKAGFDPTAPDLHLGHTVLINKLRQFQDLGHEVIFLI 72

Query: 75  GGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCS 134
           G  T +IGDP+ +  +R  +   ++++N    K      +     +    ++ N  W+  
Sbjct: 73  GDFTGMIGDPTGKSATRPPLTEDQVRDNAITYKEQVFKILD----REKTRVVFNSEWMSK 128

Query: 135 IKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCR 194
           +   D++R  G + +V RML  +    R + EQ ++  EF Y ++Q YD V L    +  
Sbjct: 129 MTAADMIRLAGQY-TVARMLERDDFTKRYRSEQPIAIHEFLYPLVQGYDSVAL----EAD 183

Query: 195 LQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTS 253
           +++GG+DQ  N++ G  L +         LT P+L    G  KM K+L   + ++    S
Sbjct: 184 IELGGTDQKFNLLMGRILQKHYGQKPQAILTVPILEGLDGVQKMSKSLGNYVGVS---DS 240

Query: 254 PYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEITTMVH 311
           P   +    ++ D  +  + + L+  PM+EI+  + A   G+   + K+++A E+ T  H
Sbjct: 241 PGEMYTKLLSMPDELLWRYFELLSFRPMAEIEHFKAAVAGGENPQDYKRVLAEELITRFH 300

Query: 312 GREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRH 371
             E A+ A  +A     +     ++P + +S  E    + +  ++  AG   +   AR  
Sbjct: 301 DEEAAKTAHKSAGNRVALGAIPDNVPVVEVSL-EGQGEIPMPAVLRLAGLVKNGAAARDV 359

Query: 372 LKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           L   A+ ++      +++      F +     +  GKK      + 
Sbjct: 360 LGRGAVYVDGQQFEGQRM------FVAGDECVIQAGKKKIARVIIV 399


>gi|90083124|dbj|BAE90644.1| unnamed protein product [Macaca fascicularis]
          Length = 477

 Score =  378 bits (972), Expect = e-103,   Method: Composition-based stats.
 Identities = 136/431 (31%), Positives = 206/431 (47%), Gaps = 28/431 (6%)

Query: 13  SERGFIHQISNPR----ELDILCSQG----VVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
             RG             EL  L  +G      T Y G+D TA SLH GHL  L+ LF LQ
Sbjct: 43  KARGLFKNFFPETGTKIELPELFDRGTASFPQTIYCGFDPTADSLHVGHLLALLGLFHLQ 102

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI-------EKIKGIFSSFIKYG 117
           + GH  I+L+GG T+ +GDPS R + R  + ++ ++ N        E +          G
Sbjct: 103 RAGHNVIALVGGATARLGDPSGRTKEREALETERVRANARALRLGLEALAANHQQLFTDG 162

Query: 118 TGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYM 177
                  +L+N  W      +D L  +G  F +  +LS +SV+ RLK  + +S  EF Y 
Sbjct: 163 RSWGSFTVLDNSAWYQKQHLVDFLAAVGGHFRMGTLLSRQSVQLRLKSAEGMSLAEFFYQ 222

Query: 178 ILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
           +LQAYDF  L + Y CR+Q+GGSDQ GNI+ G +   +L    +F +T PL+T+ +G K+
Sbjct: 223 VLQAYDFYYLFQRYGCRVQLGGSDQLGNIMSGYEFINKLTGEDVFGITVPLITSTTGAKL 282

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI-- 295
           GK+   A+WLN++ TSP+  +Q++    D  V  + K  T LP+ EID + +L  KE   
Sbjct: 283 GKSAGNAVWLNRDKTSPFELYQFFVRQPDDSVERYLKLFTFLPLPEIDHIMQLHVKEPER 342

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM----------PTISISKDE 345
             A+K +A E+T +VHGRE  + A       +  SI +  +               S+  
Sbjct: 343 RGAQKRLAAEVTKLVHGREGLDSAKRCTQALYHSSIDALEVMSDQELKELFKEAPFSELF 402

Query: 346 VSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL-QDFDSTGNIKL 404
           +  G  +L    KA          R +    + IN+  ++N +  + + Q     G   L
Sbjct: 403 LDPGTSVLDTCRKANAIPDGPRGYRMITEGGVSINHRQVTNPESVLVVGQHILKNGLSLL 462

Query: 405 SFGKKNHIICH 415
             GK+N  I  
Sbjct: 463 KIGKRNFYIIK 473


>gi|330812094|ref|YP_004356556.1| tyrosyl-tRNA synthetase [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327380202|gb|AEA71552.1| tyrosyl-tRNA synthetase [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 399

 Score =  378 bits (972), Expect = e-103,   Method: Composition-based stats.
 Identities = 103/408 (25%), Positives = 170/408 (41%), Gaps = 24/408 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG    +     ++ L     +    G+D TA  LH GH   +  L   Q  GH+ I
Sbjct: 10  LIKRGAEELLVESELIEKLKRGQPLRIKAGFDPTAPDLHLGHTVLINKLRQFQDLGHQVI 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T +IGDPS +  +R  +  +++ +N E  K      +     +    +  N TW
Sbjct: 70  FLIGDFTGMIGDPSGKSATRPPLTREQVLDNAETYKTQVFKILDPAKTE----VAFNSTW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +  +   D +R + S ++V RML  +    R K  Q ++  EF Y ++Q YD V L  + 
Sbjct: 126 MDQMGPADFIR-LTSQYTVARMLERDDFDKRYKSNQPIAIHEFLYPLVQGYDSVALRAD- 183

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G +L           LT PLL    G  KM K+L   + + + 
Sbjct: 184 ---VELGGTDQKFNLLMGRELQRGYGQEAQCILTMPLLEGLDGVKKMSKSLGNYVGIQE- 239

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATEITT 308
             +P   +    +I D  +  + + L+   M EI+        G    + K  +A EI  
Sbjct: 240 --APGVMYSKLVSIPDVLMWRYFELLSFRSMDEINAFRADVEAGANPRDIKIKLAEEIVA 297

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
             HG E A  A  AA            +P I ++  E    M +  ++ KAG   +   A
Sbjct: 298 RFHGEEAAASAHRAAGNRMKDGELPDDLPEIELTAAE---DMPIAAVLNKAGLVKNAAVA 354

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           R  L S  ++I+  ++ +     +L             GKK      L
Sbjct: 355 RDLLGSGGVRIDGEVV-DRTYIYEL-----GSTHVCQAGKKAFARITL 396


>gi|317051289|ref|YP_004112405.1| tyrosyl-tRNA synthetase [Desulfurispirillum indicum S5]
 gi|316946373|gb|ADU65849.1| tyrosyl-tRNA synthetase [Desulfurispirillum indicum S5]
          Length = 404

 Score =  378 bits (972), Expect = e-103,   Method: Composition-based stats.
 Identities = 99/407 (24%), Positives = 173/407 (42%), Gaps = 22/407 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG +  I        L     +    G+D TA  LH GH   +  L   Q  GH+  
Sbjct: 12  LIKRGCVELIEEEELRKKLSRDKPLIIKAGFDPTAPDLHLGHTVLMQKLRHFQLLGHEIH 71

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T++IGDPS + E+RRM+  +++  N E  K      +     +    ++ N  W
Sbjct: 72  FLIGDFTAMIGDPSGKSETRRMLTREDVLANAETYKAQVFKILDPEKTR----VVFNSHW 127

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L  +    ++ E+ +  +V RML  +  ++R +    +S +EF Y + Q YD V +  + 
Sbjct: 128 LYELDIRAMM-ELAAKTTVARMLERDDFQNRYRSGGEISLVEFFYPLFQGYDSVAMKAD- 185

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G  L  R    +   +T P+L    G  KM K+L   I + + 
Sbjct: 186 ---VELGGTDQKFNLLMGRTLQRRYGQEEQIVITMPILEGTDGVNKMSKSLGNYIGVTEP 242

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAKKIIATEIT 307
                  +    +I D  +  + + L+   +++I+ + +          E K  +  EI 
Sbjct: 243 AN---EMFGKVMSISDDLMFRYFELLSDRSLADIEALRQGIASGSLHPKEVKVTLGREIV 299

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
              HG    E+AA    + F    + + MP   +     +    + T I   GFA S  E
Sbjct: 300 DRFHGAGAGEEAARHFEQVFARGENPEEMPVFEVPLGATAD-KRICTFIASVGFAKSNGE 358

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           ARR ++   + ++ S I +        +F   G   L  GK+     
Sbjct: 359 ARRLMEQGGVSLDGSAICD-----SHAEFQVPGECVLKVGKRRFAKI 400


>gi|297180578|gb|ADI16789.1| tyrosyl-tRNA synthetase [uncultured gamma proteobacterium
           HF0010_11K06]
          Length = 407

 Score =  378 bits (971), Expect = e-103,   Method: Composition-based stats.
 Identities = 109/401 (27%), Positives = 183/401 (45%), Gaps = 25/401 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQ-GVVTAYIGYDLTASSLHAGHLTQLML 59
           M    S+ L IL  RG + +I   + L+   ++   +    G+D TA  LH GH   +  
Sbjct: 1   MSLSTSEKLEILK-RG-VEEIIPEKGLEKKLNKNKPLIIKAGFDPTAPDLHLGHTVLINK 58

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG 119
           L   Q  GH+ + L+G  T +IGDPS   E+R ++  +++++N E  +      +     
Sbjct: 59  LKQFQDLGHQVVFLIGDFTGMIGDPSGVSETRPILTVEQLKKNSETYQEQIFKILD---- 114

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
           K    +  N TW   +   +L+  + S  +V RML  +    R K  + +S  EF Y ++
Sbjct: 115 KKKTKIEFNSTWFKKMTSAELI-NLSSKMTVARMLERDDFSKRYKGNKPISIHEFIYPLV 173

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMG 238
           Q YD  EL  +    +++GG+DQ  N++ G D+ +     +   +T P+L    G  KM 
Sbjct: 174 QGYDSFELKSD----IELGGTDQKFNLLVGRDIQKSFGMEEQIIMTLPILEGTDGVKKMS 229

Query: 239 KTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEIN 296
           K+L+  I L     SP + +    +I D  +  +   L+     EI  + K   QG    
Sbjct: 230 KSLNNYIGL---KESPNDMFGKIMSISDDLMWRYFDLLSFKSSVEIKELKKKTEQGLNPM 286

Query: 297 EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLI 356
           EAKK+++ EI T  HG E+A  A       F        +  I +S    +  + +L L+
Sbjct: 287 EAKKMLSAEIVTRFHGEEKALLAEKEFTNRFSKGNDPAEIKLIKLSMK--ASSISVLDLL 344

Query: 357 V-----KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
                       S +EARR +   A+KI+   IS+E + ++
Sbjct: 345 SSEELGDHKLCKSKSEARRMIAQGAVKIDGKKISDEAISVQ 385


>gi|237748967|ref|ZP_04579447.1| tyrosyl-tRNA synthetase [Oxalobacter formigenes OXCC13]
 gi|229380329|gb|EEO30420.1| tyrosyl-tRNA synthetase [Oxalobacter formigenes OXCC13]
          Length = 414

 Score =  378 bits (971), Expect = e-103,   Method: Composition-based stats.
 Identities = 93/389 (23%), Positives = 168/389 (43%), Gaps = 26/389 (6%)

Query: 32  SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESR 91
           +   +   +G D TA  LH GH   L  +  LQ  GH  I L+G  TS+IGDPS R+ +R
Sbjct: 49  TGKPLRIKLGLDPTAPDLHLGHTVVLNKMRQLQNLGHVVIFLIGDFTSMIGDPSGRNITR 108

Query: 92  RMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVN 151
             +  ++++EN        S  +     +    +  N  W   +    ++ ++ S +++ 
Sbjct: 109 PPLTREQVKENAMTYFAQASLVLDPEKTE----IRYNSEWSDKLGAAGMI-QLASQYTLA 163

Query: 152 RMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGID 211
           R++  E   +R K    +S  E  Y ++Q YD V L  +    L++GG+DQ  N++ G +
Sbjct: 164 RIMEREDFANRFKNGFPISVHELLYPLMQGYDSVALQSD----LELGGTDQKFNLLVGRE 219

Query: 212 LGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVV 270
           L           LT PLL    G  KM K+    + + +        +    +I D  + 
Sbjct: 220 LQRHYNQEPQCILTMPLLEGLDGVEKMSKSKGNYVGITEPANI---MFGKLMSISDEMMW 276

Query: 271 SFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFD 328
            +   L+   + +++R+ +    GK   + K  +  EI T  H    A+ A    +    
Sbjct: 277 RYYDLLSFKSIQDVERLKEEVKNGKNPRDVKVELGKEIVTRFHSGAAADAALEDFVAR-S 335

Query: 329 MSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEK 388
                  +P +S+S       +G+  L+ +AG   ST+EA R +    ++I++  IS+  
Sbjct: 336 RGGIPDDIPAVSLS----GAPLGIGQLLKQAGLCASTSEALRLVDQGGVRIDSQTISDRG 391

Query: 389 LQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           L+++   F       +  GK+      L 
Sbjct: 392 LKVEAGSF------VVQVGKRKFAKVTLA 414


>gi|269798124|ref|YP_003312024.1| tyrosyl-tRNA synthetase [Veillonella parvula DSM 2008]
 gi|269094753|gb|ACZ24744.1| tyrosyl-tRNA synthetase [Veillonella parvula DSM 2008]
          Length = 402

 Score =  378 bits (971), Expect = e-103,   Method: Composition-based stats.
 Identities = 99/408 (24%), Positives = 177/408 (43%), Gaps = 30/408 (7%)

Query: 18  IHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPIS 72
           +  + N ++L     +       +   +G D TA  +H GH   L  L   Q+ GH+ + 
Sbjct: 15  VADLINEQDLVKKIEKSIKENKPLVVKLGLDPTAPDIHLGHTVPLRKLRLFQEFGHQVVI 74

Query: 73  LMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL 132
           ++GG T+ IGDP+ +  +R  +  +E+ +N E  K      +         ++ +N  WL
Sbjct: 75  VIGGFTARIGDPTGKSVTRPPLTKEEVLKNAETYKTQIFKVLD----PEKTIVRDNSEWL 130

Query: 133 CSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYD 192
            S+ + D+LR + S ++V RM+  +    R K  + +   EF Y ++Q +D V L  +  
Sbjct: 131 ESMNFADVLR-LASSYTVARMMERDDFSKRFKEGRPIGVHEFMYPLMQGHDSVALHAD-- 187

Query: 193 CRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEM 251
             ++ GG+DQ  N++ G  L E         +T PLL    G  KM K+L   I +++E 
Sbjct: 188 --VEFGGTDQTFNLLMGRHLQELEGQEPQVVITMPLLEGLDGIQKMSKSLGNYIGIDEE- 244

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAKKIIATEITT 308
             P   +    +I D  ++ +   +T + + + + M K          +AK  +A  I  
Sbjct: 245 --PKEMYGKAMSIPDELMMRYFMLVTDMSIEDQEDMTKRLESGELHPRDAKMQLARTIVR 302

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
           + HG E A +A       F        +P  ++  D  +  + +      AG   S  EA
Sbjct: 303 LYHGEEAALEAEEEFKRVFQQRAMPTDIPEYAM--DAPTEPIFVPQFCTDAGLTASNGEA 360

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           RR +K+ A K+N    S E + ++         + L  GK+  +    
Sbjct: 361 RRSIKAGAFKVNGEKYSEENITLEDG-------MILQVGKRKFLKIKF 401


>gi|332257527|ref|XP_003277855.1| PREDICTED: tyrosyl-tRNA synthetase, mitochondrial [Nomascus
           leucogenys]
          Length = 477

 Score =  378 bits (971), Expect = e-103,   Method: Composition-based stats.
 Identities = 136/431 (31%), Positives = 204/431 (47%), Gaps = 28/431 (6%)

Query: 13  SERGFIHQISNPR----ELDILCSQG----VVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
             RG             EL  L  +G      T Y G+D TA SLH GHL  L+ LF LQ
Sbjct: 43  KARGLFKDFFPETGTKIELPELFDRGTASFPQTIYCGFDPTADSLHVGHLLALLGLFHLQ 102

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI-------EKIKGIFSSFIKYG 117
           + GH  I+L+GG T+ +GDPS R + R  + +  ++ N        E +          G
Sbjct: 103 RAGHNVIALVGGATARLGDPSGRTKEREALETDRVRANARALRLGLEALAANHQQLFTDG 162

Query: 118 TGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYM 177
                  +L+N  W      +D L  +G  F +  +LS +SV+ RLK  + +S  EF Y 
Sbjct: 163 RSWGSFTVLDNSAWYEKRHLVDFLAAVGGHFRMGTLLSRQSVQLRLKSPEGMSLAEFFYQ 222

Query: 178 ILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
           +LQAYDF  L + Y CR+Q+GGSDQ GNI+ G +   +L    +F +T PL+T+ +G K+
Sbjct: 223 VLQAYDFYYLFQRYGCRVQLGGSDQLGNIMSGYEFINKLTGEDVFGITVPLITSTTGAKL 282

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI-- 295
           GK+   A+WLN++ TSP+  +Q++    D  V  + K  T LP+ EID + +L  KE   
Sbjct: 283 GKSAGNAVWLNRDKTSPFELYQFFVRQPDDSVERYLKLFTFLPLPEIDHIMQLHVKEPER 342

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM----------PTISISKDE 345
              +K +A E+T +VHGRE  + A       +  SI +  +               S+  
Sbjct: 343 RGPQKRLAAEVTKLVHGREGLDSAKRCTKALYHSSIDALEVMSDQELKELFKEAPFSEFF 402

Query: 346 VSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEK-LQIKLQDFDSTGNIKL 404
           +  G  +L    KA          R +    + IN+  ++N + + I  Q     G   L
Sbjct: 403 LDPGTSVLDTCRKANAIPDGPRGYRMITEGGVSINHQQVTNPESVLIVGQHILKNGLSLL 462

Query: 405 SFGKKNHIICH 415
             GK+N  I  
Sbjct: 463 KIGKRNFYIIK 473


>gi|255320689|ref|ZP_05361866.1| tyrosyl-tRNA synthetase [Acinetobacter radioresistens SK82]
 gi|255302305|gb|EET81545.1| tyrosyl-tRNA synthetase [Acinetobacter radioresistens SK82]
          Length = 404

 Score =  378 bits (971), Expect = e-103,   Method: Composition-based stats.
 Identities = 102/420 (24%), Positives = 182/420 (43%), Gaps = 28/420 (6%)

Query: 6   SDFL--SI---LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           S+FL       L +RG    IS    L  L     +    G+D TA  LH GH   +  L
Sbjct: 2   SNFLPAEEQLALIQRGTHEIISEEDLLKKLKENRPLKVKAGFDPTAPDLHLGHTVLINKL 61

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GH    L+G  T++IGDP+ +  +R  +  +++ EN +  +      ++    K
Sbjct: 62  KVFQDLGHDVYFLIGDYTAMIGDPTGKSATRPPLSREQVLENAKTYQEQVFKILEPNKTK 121

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               ++ N  W  S    DL+ ++ S  +V RML  +    R   +Q ++  EF Y ++Q
Sbjct: 122 ----VVFNSEWFASKTAADLI-QLASQQTVARMLERDDFTKRYSSQQPIAIHEFLYPLVQ 176

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGK 239
            YD + L    +  +++GG+DQ  N++ G  L  R        +T P+L    G  KM K
Sbjct: 177 GYDSIAL----EADVELGGTDQTFNLLMGRTLQGRYHQEPQVCITVPILEGLDGVQKMSK 232

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINE 297
           +L   I +     +P   +Q   ++ D+ +  + + L+   M EI       ++G+   E
Sbjct: 233 SLGNYIGV---FDAPGAMYQKVLSMPDSLIERYFELLSFKSMPEIQDLLKEMVEGRNPQE 289

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K+I+A E+    HG E A  A   A          +  P ++IS+ E    + + +++ 
Sbjct: 290 IKRILALELVERFHGSEAAANAHKGAGNIITEGELPEGTPEVTISRAEFGGEIFIASILR 349

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            AG   +  +A+  +   A+K++  ++ +    +K           +  GKK   I  + 
Sbjct: 350 TAGLTKNAAQAKDAVARGAVKVDWEVV-DADFSVKE-----NKTYIIQAGKK--AIAKVT 401


>gi|290973260|ref|XP_002669367.1| predicted protein [Naegleria gruberi]
 gi|284082913|gb|EFC36623.1| predicted protein [Naegleria gruberi]
          Length = 492

 Score =  378 bits (971), Expect = e-102,   Method: Composition-based stats.
 Identities = 140/457 (30%), Positives = 223/457 (48%), Gaps = 48/457 (10%)

Query: 2   PAFKSDFLSILSERGFIHQISNP-RELDILCSQGV-----VTAYIGYDLTASSLHAGHLT 55
            +  ++F+S L +RG  +  ++    L    + G      +  Y G+D TAS LH G+L 
Sbjct: 39  SSNNNEFISDLKKRGIYNDATSGFDNLMQEMNSGSELAKSIGIYAGFDPTASGLHVGNLL 98

Query: 56  QLMLLFWLQKTGH----KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFS 111
            L  L   Q   +        L+GG T  IGDPS R   R ++    I  NIE +K   +
Sbjct: 99  VLQTLKRFQLAFNPKNVHIYCLVGGATGRIGDPSGRKTERPLLDESTINNNIEGLKREMN 158

Query: 112 SFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR----EQ 167
           SF    + K +  ++NN  WL  +K IDLLR +G +F +  ML  +SV+SR++       
Sbjct: 159 SFF---SSKNNVTVVNNADWLGEMKMIDLLRNVGKYFQIANMLRLDSVKSRVENADADNG 215

Query: 168 SLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-------TPK 220
            ++F EF+Y + Q+YDF  L  + + RLQ+GGSDQWGNI  G++  ++ +          
Sbjct: 216 GMTFTEFSYSLFQSYDFFHLLNSNNVRLQIGGSDQWGNITSGLEFIKKKQTAMPESCQSV 275

Query: 221 LFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLP 280
              +T PLLTTA G K GK++  A+WLN EMTS ++F+QY+  + DADV    K LT + 
Sbjct: 276 CSGMTIPLLTTADGVKFGKSMGNAVWLNPEMTSVFDFYQYFLRVQDADVEKLLKMLTFVS 335

Query: 281 MSEIDRMAKLQG--KEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPT 338
           + +ID++ +      E   A++ +A E+TT +HG+E+ EK        F     S+    
Sbjct: 336 LEDIDQILQEHNQQPEKRIAQQRLAEELTTQIHGKEQLEKVQKCTNLLF--GASSEEAIE 393

Query: 339 I--SISKDEVSRGM----------------GLLTLIVKAGFATSTNEARRHLKSNAIKIN 380
           I  ++SK +++  M                 ++ + +      S +E  + +KS    IN
Sbjct: 394 ILKTLSKKDITSLMKDSVGGQVPKEDLLSKPIIDIALALKLGPSKSELGKLIKSGGFYIN 453

Query: 381 NSIISNEKLQIKLQDFDSTG--NIKLSFGKKNHIICH 415
                + K  +   D  +       L  GKKN+ +  
Sbjct: 454 YKRQIDPKYVMTEADLVAGNGSIAVLRLGKKNYHLIE 490


>gi|303258283|ref|ZP_07344290.1| tyrosine--tRNA ligase [Burkholderiales bacterium 1_1_47]
 gi|302859036|gb|EFL82120.1| tyrosine--tRNA ligase [Burkholderiales bacterium 1_1_47]
          Length = 414

 Score =  378 bits (971), Expect = e-102,   Method: Composition-based stats.
 Identities = 99/412 (24%), Positives = 179/412 (43%), Gaps = 32/412 (7%)

Query: 17  FIHQISN----PRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            I + ++      EL+   ++       +   +G D TA  +H GH   L  L   Q  G
Sbjct: 22  LIKRGTDTLLVEEELEQKLARSKASGKPLRIKLGLDPTAPDIHLGHTVVLNKLRQFQNLG 81

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H  I L+G  TS IGDPS R+ +R  +  ++I+ N +         +     +    +  
Sbjct: 82  HTVIFLVGDFTSAIGDPSGRNTTRPPLTREQIEANAKTYLDQAYKVLDKDKTE----VRF 137

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W   +     ++ + S +++ R+L  +    R   +  ++  E  Y ++Q YD V L
Sbjct: 138 NSEWCNKLGSAGFIK-LASRYTLARLLERDDFAKRFASQAPIAMHELIYPLMQGYDSVAL 196

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIW 246
               +  +++GGSDQ  N++ G +L  +        +T PLL    G  KM K+    I 
Sbjct: 197 ----EADVELGGSDQRFNLLVGRELQRQYNQEAQCIITMPLLVGLDGVNKMSKSKHNYIG 252

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKIIAT 304
           + +E   P   +    ++ D  + ++   L+     EI +       G+   +AK ++A 
Sbjct: 253 ITEE---PNEMFGKVMSLSDDLMWNWFDLLSMRSNEEIQQLKNECEAGRNPRDAKVMLAK 309

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           EI T  H  E A+ A    +  F      +++P +++  +     MG+L LI +AG A S
Sbjct: 310 EIVTRFHNAEAADAAEQEFINRFRKGAVPENIPEVTLENN--GEAMGILKLIKEAGLAPS 367

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           T EA R++    + +N   ++++ LQ++       G   L  GK+      L
Sbjct: 368 TTEAGRNVTQGGVHLNGKKVTDKALQVQP------GTYTLQVGKRKWAKVTL 413


>gi|224417654|ref|ZP_03655660.1| tyrosyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
 gi|253827006|ref|ZP_04869891.1| tyrosyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
 gi|313141200|ref|ZP_07803393.1| tyrosyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
 gi|253510412|gb|EES89071.1| tyrosyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
 gi|313130231|gb|EFR47848.1| tyrosyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
          Length = 404

 Score =  378 bits (971), Expect = e-102,   Method: Composition-based stats.
 Identities = 100/397 (25%), Positives = 175/397 (44%), Gaps = 29/397 (7%)

Query: 24  PRELDILCSQGVV-TAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIG 82
            + +      G       G+D TA  LH GH   L  L   QK G     L+G  T +IG
Sbjct: 28  EKLIRDYFENGKTFKVKAGFDPTAPDLHLGHTVLLQKLATFQKYGGIVCFLIGDFTGMIG 87

Query: 83  DPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLR 142
           DP+ + E+R+ +  +++  N +  +      +      +   +  N  WL ++    ++ 
Sbjct: 88  DPTGKSETRKPLNKEQVLANAKTYEEQVYKVLD----SSKMEIAFNSKWLDNLGTRGMI- 142

Query: 143 EIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQ 202
           E+ + FSV RML  +    R K +  +S +EF Y +LQ YD V L    +C ++ GG+DQ
Sbjct: 143 ELAAKFSVARMLERDDFEKRFKNQNPISIVEFFYPLLQGYDSVAL----ECDIECGGTDQ 198

Query: 203 WGNIICGIDLGERLKTPK-LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQY 260
             N++ G  L      PK    +  PLL    G  KM K+L   + + +E   P   +  
Sbjct: 199 KFNLLMGRHLQRAYGIPKEQSVVMVPLLEGLDGVHKMSKSLGNYVGITQE---PKEMFGR 255

Query: 261 WRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAKKIIATEITTMVHGREEAE 317
             +I D  +  + + L++  ++EI  + +   K       AK+ +A EI T  +  ++A+
Sbjct: 256 LLSISDTLMWRYYELLSSKSLAEIQEIKESVEKGNLHPKTAKENLALEIITRYYDAQKAK 315

Query: 318 KAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAI 377
           +A     + F        MPT      E + G+ +  L+ + G   S +EA R +K   +
Sbjct: 316 EAKEEFDKVFSKDEMPSQMPTF-----EKNSGIWIAQLMSECGLCVSNSEALRLIKQGGV 370

Query: 378 KINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           K+N   + + KL +++      G   +  GK+     
Sbjct: 371 KVNGQKLEDSKLNLQI------GEYVIQAGKRKFARV 401


>gi|325294991|ref|YP_004281505.1| Tyrosyl-tRNA synthetase [Desulfurobacterium thermolithotrophum DSM
           11699]
 gi|325065439|gb|ADY73446.1| Tyrosyl-tRNA synthetase [Desulfurobacterium thermolithotrophum DSM
           11699]
          Length = 408

 Score =  378 bits (970), Expect = e-102,   Method: Composition-based stats.
 Identities = 101/382 (26%), Positives = 164/382 (42%), Gaps = 22/382 (5%)

Query: 38  AYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQ 97
              G+D TA  LH GH   L  L   Q+ GHK   L+G  T++IGDP+ + E+R  +  +
Sbjct: 35  VKAGFDPTAPDLHLGHTVLLWKLRDFQELGHKVYFLIGDFTAMIGDPTGKSETRPPLTKE 94

Query: 98  EIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFE 157
           E+ +N E         +         +++ N  WL  +   DL++ + S ++V RML  +
Sbjct: 95  EVLKNAETYAQQVFKILD----PEKTVVVFNSEWLDKMTATDLIK-LSSKYTVARMLERD 149

Query: 158 SVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK 217
               R K  +S+   EF Y +LQ YD V L  +    +++GG+DQ  N++ G  L     
Sbjct: 150 DFSKRFKEGRSIHIHEFIYPLLQGYDSVALKAD----VELGGTDQKFNLLIGRHLQREFG 205

Query: 218 TPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRL 276
             +   +  P+L    G  KM K+L   I +   +  P   +     I D  +  + + +
Sbjct: 206 QEEQTCIMMPILEGLDGVQKMSKSLGNYIGI---LEPPEEQFGKVMRISDELMWRYYRLV 262

Query: 277 TTLPMSEIDRMAKLQGK---EINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS 333
           T +   EI+ M K   +      EAKK +A  I    HG + A KA       F      
Sbjct: 263 TRVSEEEIEEMEKAVREGKLHPMEAKKRLAETIVRTFHGEDAARKAREHFERVFSKRELP 322

Query: 334 QHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL 393
           +               + L  L+ +AG   ST+E RR +K   ++I+   I++E L+I +
Sbjct: 323 EE--IPEPEISIPENPVWLPRLLKEAGLVKSTSEGRRQIKGGGVRIDGEKITDENLKIDV 380

Query: 394 QDFDSTGNIKLSFGKKNHIICH 415
                     L  GK+      
Sbjct: 381 ----LKKEFILQVGKRRFARIK 398


>gi|297691534|ref|XP_002823137.1| PREDICTED: tyrosyl-tRNA synthetase, mitochondrial-like [Pongo
           abelii]
          Length = 477

 Score =  378 bits (970), Expect = e-102,   Method: Composition-based stats.
 Identities = 136/431 (31%), Positives = 206/431 (47%), Gaps = 28/431 (6%)

Query: 13  SERGFIHQISNPR----ELDILCSQG----VVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
             RG             EL  L  +G      T Y G+D TA SLH GHL  L+ LF LQ
Sbjct: 43  KARGLFKDFFPETGTKIELPELFDRGTASFPQTIYCGFDPTADSLHVGHLLALLGLFHLQ 102

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI-------EKIKGIFSSFIKYG 117
           + GH  I+L+GG T+ +GDPS R + R  + ++ ++ N        E +          G
Sbjct: 103 RAGHNVIALVGGATARLGDPSGRTKEREALETERVRVNARALRLGLEALAANHQQLFTDG 162

Query: 118 TGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYM 177
                  +L+N  W      +D L  +G  F +  +LS +SV+ RLK  + +S  EF Y 
Sbjct: 163 RSWGSFTVLDNSAWYQKQHLVDFLAAVGGHFRMGTLLSRQSVQLRLKSPEGMSLAEFFYQ 222

Query: 178 ILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
           +LQAYDF  L ++Y CR+Q+GGSDQ GNI+ G +   +L    +F +T PL+T+ +G K+
Sbjct: 223 VLQAYDFYYLFQHYGCRVQLGGSDQLGNIMSGYEFINKLTGEDVFGITVPLITSTTGAKL 282

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI-- 295
           GK+   A+WLN++ TSP+  +Q++    D  V  + K  T LP+ EID + +L  KE   
Sbjct: 283 GKSAGNAVWLNRDKTSPFELYQFFVRQPDDSVERYLKLFTFLPLPEIDHIMQLHVKEPER 342

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM----------PTISISKDE 345
              +K +A E+T +VHGRE  + A       +  SI +  +               S+  
Sbjct: 343 RGPQKRLAAEVTKLVHGREGLDSAKRCTQALYHSSIDALEVMSDEELKELFKEAPFSEFF 402

Query: 346 VSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEK-LQIKLQDFDSTGNIKL 404
           +  G  +L    KA          R +    + IN+  ++N + + I  Q     G   L
Sbjct: 403 LDPGTNVLDTCRKANAIPDGPRGYRMITEGGVSINHQQVTNPESVLIVGQHILKNGLSLL 462

Query: 405 SFGKKNHIICH 415
             GK+N  I  
Sbjct: 463 KIGKRNFYIIK 473


>gi|170756305|ref|YP_001780828.1| tyrosyl-tRNA synthetase [Clostridium botulinum B1 str. Okra]
 gi|169121517|gb|ACA45353.1| tyrosyl-tRNA synthetase [Clostridium botulinum B1 str. Okra]
          Length = 400

 Score =  378 bits (970), Expect = e-102,   Method: Composition-based stats.
 Identities = 110/406 (27%), Positives = 185/406 (45%), Gaps = 33/406 (8%)

Query: 18  IHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPIS 72
           + +I N  +L     +       +T  +G D TA  +H GH   L  +  LQ  GH+ + 
Sbjct: 15  VDEIINVEDLKNKLEKSQKTGKPLTVKLGLDPTAPDIHIGHSVVLRKIRQLQDLGHRAVI 74

Query: 73  LMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL 132
           ++G  T  IGDP+ + ++R+ +  +E+  N +  +      I             N  WL
Sbjct: 75  IIGDFTGRIGDPTGKSKTRKPLTQEEVMFNAKTYEEQIFKIIDKDKTDLK----FNSEWL 130

Query: 133 CSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYD 192
             +   D + E+ S ++V RML  E  + R +   S+   EF Y +LQA+D V L  +  
Sbjct: 131 GKLSLRDTI-ELTSKYTVARMLEREDFKKRFESHSSIGIHEFFYPLLQAFDSVSLKAD-- 187

Query: 193 CRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEM 251
             +++GG+DQ  N++ G  + +        A+  PLL    G  KM K+L   I +N++ 
Sbjct: 188 --IELGGTDQRFNLLMGRTIQKDFDQESQVAILMPLLEGTDGKDKMSKSLGNYIGINEDA 245

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKIIATEITT 308
               + +    +I D  +V + +  T +   E+ +M    + +     + K  +A EI  
Sbjct: 246 N---DIYGKVMSIPDGMIVKYYELATDIHPDEVAKMKARLEEENVNPRDIKMELAKEIVR 302

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
           + HG E + KA       F      + + TI ++  E      ++ LIVKA FA S NEA
Sbjct: 303 LYHGEEASIKAEENFKNIFQQGNIPEDIDTIKVNLTE----TNIVDLIVKAKFAPSKNEA 358

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           RR +K  A+KIN   + +E+ ++K +D        L  GKK  I  
Sbjct: 359 RRLVKQGAVKINGEKV-DEECKVKNED-------ILQVGKKKFIKI 396


>gi|163783432|ref|ZP_02178424.1| tyrosyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
 gi|159881354|gb|EDP74866.1| tyrosyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
          Length = 418

 Score =  377 bits (969), Expect = e-102,   Method: Composition-based stats.
 Identities = 134/423 (31%), Positives = 232/423 (54%), Gaps = 27/423 (6%)

Query: 3   AFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
            F  D +  L+ RGFI  +++     I   +  +T Y G+D TA SLH G+L  +  L  
Sbjct: 2   GFIKDAIEELTWRGFIKDVTDK---SIEVKEEKLTVYAGFDPTAPSLHLGNLIPVAALRV 58

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD 122
            QK G+  I ++GG T  IGDPS + + R ++  +++  N EKI+      +       D
Sbjct: 59  FQKHGNPVIVIVGGATGRIGDPSGKSKERPILPEEDLIRNKEKIEVQIKKLL-----GKD 113

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
             +L+N  W  +   ID LR++G + SVNR++    + +RL RE+ LSF EF Y +LQA+
Sbjct: 114 VPVLDNYEWFKNFGLIDFLRDVGKYVSVNRLVKHTFINNRLSREEFLSFAEFTYPLLQAF 173

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DF+ L   + C++Q+GGSDQWGNI+ G++L +RL+  K+F +T PLLTT  G K+GK+  
Sbjct: 174 DFLHLYDRFGCKVQIGGSDQWGNIVEGVELIQRLRREKVFGVTFPLLTTEDGHKIGKSEG 233

Query: 243 G--AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT-LPMSEIDRMAKLQG--KEINE 297
           G   +WL++ MTSP++ +QY+  + D+D +   +  +  +   E++ + +      E+ +
Sbjct: 234 GKKTLWLDESMTSPFDAYQYFIRLSDSDAIKLFRLFSLSMVKEEVENIIEEHRQSPELRK 293

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS--QHMP-------TISISKDEVSR 348
            +K++A E+ T VHG+E A +    +   F     +  + +          +++KDE+  
Sbjct: 294 VQKLLAREVITWVHGKEAAVECEKLSDFLFSKDPKTNLEDISKRAISWVATTVAKDEIKS 353

Query: 349 GMGLLTLIVKAGFATSTNEARRHLKSNAIKINN-SIISNEKLQIKLQDFDSTGNIKLSFG 407
            + L  L +KA    S NE R +L +  I++N  +++S+       + F +   + ++ G
Sbjct: 354 -LQLSDLFMKANLVKSKNEFRSNLMNKGIRVNGRTVVSD---MPATELFRNRSVVIIAKG 409

Query: 408 KKN 410
           K+ 
Sbjct: 410 KQR 412


>gi|328872662|gb|EGG21029.1| tyrosine-tRNA ligase [Dictyostelium fasciculatum]
          Length = 487

 Score =  377 bits (969), Expect = e-102,   Method: Composition-based stats.
 Identities = 126/444 (28%), Positives = 211/444 (47%), Gaps = 52/444 (11%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RGFI+Q++   E     +   V+ Y G+D TA+SLH G+L QLM+L   ++ 
Sbjct: 41  NVIDTLKSRGFIYQMTANDEEMKKLTSKPVSLYAGFDPTANSLHIGNLIQLMVLLQFKRH 100

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH PI+L+GG T++IGDPS +   R  +    I +N + I+    + +       D L++
Sbjct: 101 GHNPIALLGGATALIGDPSGKSTDRPQLDQTFITDNSKIIRENIETIL-----GKDNLIV 155

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL----------------------- 163
           +N  W   I  I   R+IG +F +  ML  + +++R+                       
Sbjct: 156 DNYDWNKDISIISFFRDIGKYFRIGSMLRKDFIQNRIGQVMEIPKGNGETTEKCVVLNNT 215

Query: 164 KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFA 223
                +S  EF Y + Q+ D+V L   ++C +Q+GGSDQWGNI  G DL ++        
Sbjct: 216 SDSTGISLPEFCYSLFQSNDYVHLHSTHNCVIQIGGSDQWGNITDGCDLIKKKLNKTAHG 275

Query: 224 LTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSE 283
           +T PLLT + G K+GK+   +IWL+   TSP+NF+QYW  I D DV       T +P+ E
Sbjct: 276 ITIPLLTNSQGKKLGKSEGNSIWLSASRTSPFNFFQYWIQIADDDVEKLLNLFTFIPLQE 335

Query: 284 IDRMAKLQGKEI--NEAKKIIATEITTMVHGREEAEKAATAAMECFDMS----------- 330
           I  + +    E     A++++A  +T +VHG +  E+A       F              
Sbjct: 336 IKEVMEKHRAEPHLRHAQRVLAEHVTRIVHGDQGVEEAINTTKLLFSEDSLSILDSYRND 395

Query: 331 -------IHSQHMPTISISKDEV--SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINN 381
                      +   I IS+  +   +   + ++   A  + S N+ ++ ++S +I+IN 
Sbjct: 396 PVRADSLFSKLNFKEIEISQYPIQGEKSATVASIFQSAS-SASRNQVKQLIESKSIQING 454

Query: 382 SIISNEKLQIKLQDFDSTGNIKLS 405
           + ++    +I+  D      I L 
Sbjct: 455 TTVT-PGQKIQQSDLIGNHYIILR 477


>gi|183220957|ref|YP_001838953.1| tyrosyl-tRNA synthetase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Paris)']
 gi|189911052|ref|YP_001962607.1| tyrosyl-tRNA synthetase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167775728|gb|ABZ94029.1| Tyrosine--tRNA ligase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167779379|gb|ABZ97677.1| Tyrosyl-tRNA synthetase (Tyrosine--tRNA ligase; TyrRS) [Leptospira
           biflexa serovar Patoc strain 'Patoc 1 (Paris)']
          Length = 408

 Score =  377 bits (969), Expect = e-102,   Method: Composition-based stats.
 Identities = 98/406 (24%), Positives = 184/406 (45%), Gaps = 24/406 (5%)

Query: 15  RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLM 74
           RG +  IS    L+ + S+  +T   G+D TA  LH GH   L  L   Q  GH+   ++
Sbjct: 16  RGTVEIISEAELLEKIKSKPSLTIKAGFDPTAPDLHLGHFVLLRKLKHFQDLGHEVCFML 75

Query: 75  GGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCS 134
           G  T++IGDP+ + E+R+ +  +E+ EN +  +      +          +L N  W   
Sbjct: 76  GDFTAMIGDPTGKSETRKRLSKEEVLENSKTYQSQVFKILD----PQKIKILYNSHWCSE 131

Query: 135 IKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCR 194
           +K+ D+L  + S ++V+RML  +    R K    +S +EF Y ++Q YD V +  +    
Sbjct: 132 LKFEDVL-VLTSKYTVSRMLERDDFTKRHKAGTPISMIEFLYPLVQGYDSVAMKSD---- 186

Query: 195 LQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTS 253
           +++GG+DQ  N++ G DL           +T PLL    G  KM K+L   + + ++   
Sbjct: 187 VELGGTDQKFNMLVGRDLQREYGQKPQAVITLPLLVGLDGVKKMSKSLGNYVGIIEK--- 243

Query: 254 PYNFWQYWRNIDDADVVSFAKRLTTLPMSEID---RMAKLQGKEINEAKKIIATEITTMV 310
           P + +    +I D  + ++ + LT LP++E++      + +     E K  +A  I   +
Sbjct: 244 PIDMYGKIMSISDDLMWNYFELLTDLPLAEVETKKEGIRTKALHPKEVKTELALLIMDQL 303

Query: 311 HGREEAEKAATAAMEC--FDMSIHSQHMPTISISKDEVSRGMG-LLTLIVKAGFATSTNE 367
           H +E+  KA                  +PT ++     +     L+ ++ +  F  S +E
Sbjct: 304 HPKEDNRKAVEEWTAIHNTKNRALPDEIPTETLDPSYFAEKPPLLVYVLSQLKFIPSVSE 363

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            RR +++  + ++   I++  L ++           +  GKK   +
Sbjct: 364 GRRLIQAGGLYLDEEKITDSSLALEP-----GKEYLIRQGKKGKFL 404


>gi|86609945|ref|YP_478707.1| tyrosyl-tRNA synthetase [Synechococcus sp. JA-2-3B'a(2-13)]
 gi|115305824|sp|Q2JIV0|SYY_SYNJB RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|86558487|gb|ABD03444.1| tyrosyl-tRNA synthetase [Synechococcus sp. JA-2-3B'a(2-13)]
          Length = 413

 Score =  377 bits (969), Expect = e-102,   Method: Composition-based stats.
 Identities = 104/417 (24%), Positives = 186/417 (44%), Gaps = 28/417 (6%)

Query: 2   PAFKSDFLSILSERGFIHQISNP--RELDILCSQ--GVVTAYIGYDLTASSLHAGHLTQL 57
           PA++   ++ + ERG + +I       L    +Q    +   +G D T   LH GH   L
Sbjct: 10  PAYRDPLIAQIVERG-VAEIFPGGAAALAERLAQADRPLRVKLGIDPTRPDLHLGHSVVL 68

Query: 58  MLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG 117
             L   Q  GH  I L+G  T+++GDP+ + E+R  +   E++EN           + + 
Sbjct: 69  RKLRQFQDAGHVAILLIGDFTALVGDPTGQSEARPRLTPAEVEENARTYLEQAGKILDFE 128

Query: 118 TGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYM 177
           T      +  N  WL  +   +L+ E+ +  +V +ML+ E    R +    +   EF Y 
Sbjct: 129 TP-GRLEVRRNSEWLAHLTLSELI-ELQAQMTVGQMLAKEDFAQRYQAGTPVYLHEFLYP 186

Query: 178 ILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TK 236
           +LQ YD V LA +    +++GG+DQ  N++ G DL         F LT PLL    G  K
Sbjct: 187 LLQGYDSVALAAD----VELGGTDQRFNLLTGRDLQIWKGQAPQFCLTVPLLEGLDGYQK 242

Query: 237 MGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN 296
           M K+ +  + L ++   P   +     + D  V  + + LT++P++E+ +       +  
Sbjct: 243 MSKSKNNYVGLTED---PLTMYSKLEKVPDHLVERYFELLTSVPLAELPQ-------DPR 292

Query: 297 EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQ--HMPTISISKDEVSRGMGLLT 354
           + + ++A  +    H    AE+A   A       I ++   +PT +I  D +S  + L  
Sbjct: 293 QRQILLAKTLVAQFHSPAAAEEAQRTAQALVLDGILAETGSIPTFAI--DGLSYPVKLSY 350

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           ++ + G   S  EARR ++  A++++   + +  L+       +     L  GKK  
Sbjct: 351 ILRECGLCKSAAEARRQIQGGAVRLDGQKVEDPDLEFAHASELAGR--ILQVGKKAF 405


>gi|168183056|ref|ZP_02617720.1| tyrosine--tRNA ligase [Clostridium botulinum Bf]
 gi|237794488|ref|YP_002862040.1| tyrosyl-tRNA synthetase [Clostridium botulinum Ba4 str. 657]
 gi|182673865|gb|EDT85826.1| tyrosine--tRNA ligase [Clostridium botulinum Bf]
 gi|229260524|gb|ACQ51557.1| tyrosine--tRNA ligase [Clostridium botulinum Ba4 str. 657]
          Length = 400

 Score =  377 bits (968), Expect = e-102,   Method: Composition-based stats.
 Identities = 110/406 (27%), Positives = 184/406 (45%), Gaps = 33/406 (8%)

Query: 18  IHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPIS 72
           + +I N  +L     +       +T  +G D TA  +H GH   L  +  LQ  GH+ + 
Sbjct: 15  VDEIINVEDLKSKLEKSQKTGKPLTVKLGLDPTAPDIHIGHSVVLRKIRQLQDLGHRAVI 74

Query: 73  LMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL 132
           ++G  T  IGDP+ + ++R+ +  +E+  N +  +      I             N  WL
Sbjct: 75  IIGDFTGRIGDPTGKSKTRKPLTQEEVMFNAKTYEEQIFKIIDKDKTDLK----FNSEWL 130

Query: 133 CSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYD 192
             +   D + E+ S ++V RML  E  + R +   S+   EF Y +LQA+D V L  +  
Sbjct: 131 GKLSLRDTI-ELTSKYTVARMLEREDFKKRFESHSSIGIHEFFYPLLQAFDSVSLNAD-- 187

Query: 193 CRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEM 251
             +++GG+DQ  N++ G  + +        A+  PLL    G  KM K+L   I +N++ 
Sbjct: 188 --IELGGTDQRFNLLMGRTIQKDFDQESQVAILMPLLEGTDGKDKMSKSLGNYIGINEDA 245

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSE---IDRMAKLQGKEINEAKKIIATEITT 308
               + +    +I D  +V + +  T +   E   I    + +     + K  +A EI  
Sbjct: 246 N---DIYGKVMSIPDGMIVKYYELATDIHPDEVAKIKARLEEEKVNPRDIKMELAKEIVR 302

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
           + HG+E + KA       F      + + TI ++  E      ++ LIVKA FA S NEA
Sbjct: 303 LYHGKEASTKAEANFKNIFQQGNIPEDIDTIKVNLTE----TNIVDLIVKAKFAPSKNEA 358

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           RR +K  A+KIN   + +E+ ++K +D        L  GKK  I  
Sbjct: 359 RRLVKQGAVKINGEKV-DEECKVKNED-------ILQVGKKKFIKI 396


>gi|170759521|ref|YP_001786595.1| tyrosyl-tRNA synthetase [Clostridium botulinum A3 str. Loch Maree]
 gi|169406510|gb|ACA54921.1| tyrosine--tRNA ligase [Clostridium botulinum A3 str. Loch Maree]
          Length = 400

 Score =  377 bits (968), Expect = e-102,   Method: Composition-based stats.
 Identities = 110/406 (27%), Positives = 186/406 (45%), Gaps = 33/406 (8%)

Query: 18  IHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPIS 72
           + +I N  +L     +       +T  +G D TA  +H GH   L  +  LQ  GH+ + 
Sbjct: 15  VDEIINVEDLKSKLEKSQNTGKPLTVKLGLDPTAPDIHIGHSVVLRKIRQLQDLGHRAVI 74

Query: 73  LMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL 132
           ++G  T  IGDP+ + ++R+ +  +E+  N +  +      I             N  WL
Sbjct: 75  IIGDFTGRIGDPTGKSKTRKPLTQEEVMFNAKTYEEQIFKIIDKDKTDLK----FNSEWL 130

Query: 133 CSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYD 192
             +   D + E+ S ++V RML  E  + R +   S+   EF Y +LQA+D V L  +  
Sbjct: 131 GKLSLRDTI-ELTSKYTVARMLEREDFKKRFESHSSIGIHEFFYPLLQAFDSVSLKAD-- 187

Query: 193 CRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEM 251
             +++GG+DQ  N++ G  + +        A+  PLL    G  KM K+L   I +N++ 
Sbjct: 188 --IELGGTDQRFNLLMGRTIQKDFDQESQVAILMPLLEGTDGKDKMSKSLGNYIGINEDA 245

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSE---IDRMAKLQGKEINEAKKIIATEITT 308
               + +    +I D  +V + +  T +   E   I  + + +     + K  +A EI  
Sbjct: 246 N---DIYGKVMSIPDGMIVKYYELATDIHPDEVAKIKAILEAENVNPRDIKMELAKEIVR 302

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
           + HG E + KA       F      + + TI ++ DE    + ++ LIVKA FA S NEA
Sbjct: 303 LYHGEEASVKAEGNFKNIFQQGNIPEDIDTIKVNLDE----INIVDLIVKAKFAPSKNEA 358

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           RR +K  A+KIN   + +E+ ++K ++        L  GKK  I  
Sbjct: 359 RRLVKQGAVKINGEKV-DEECKVKNEN-------ILQVGKKKFIKI 396


>gi|160901336|ref|YP_001566918.1| tyrosyl-tRNA synthetase [Delftia acidovorans SPH-1]
 gi|160366920|gb|ABX38533.1| tyrosyl-tRNA synthetase [Delftia acidovorans SPH-1]
          Length = 410

 Score =  377 bits (968), Expect = e-102,   Method: Composition-based stats.
 Identities = 96/385 (24%), Positives = 171/385 (44%), Gaps = 26/385 (6%)

Query: 35  VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMM 94
            +   +G D TA  +H GH   L  +  LQ  GH+ I L+G  T++IGDPS R+ +R  +
Sbjct: 48  PLRIKLGLDPTAPDIHLGHTVVLNKMRQLQDLGHQVIFLIGDFTTLIGDPSGRNSTRPPL 107

Query: 95  RSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRML 154
            +++I+ N E      +  +     +    +  N  W   +    ++ E+ + ++V RM+
Sbjct: 108 TAEQIKVNAETYYTQAAKVLDPARTE----VRYNSEWCDKLGARGMI-ELSAKYTVARMM 162

Query: 155 SFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
                  R     S+S  EF Y +LQ YD V L  +    L+MGG+DQ  N++ G  L +
Sbjct: 163 ERNDFHQRFTDGSSISLHEFLYPLLQGYDSVALRAD----LEMGGTDQKFNLLMGRHLQQ 218

Query: 215 RLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFA 273
                    LT PLL    G  KM K+ +  I + ++  +    +    +I D  + ++ 
Sbjct: 219 EYGQDTQCVLTMPLLVGLDGEHKMSKSKNNYIGITEDANT---MFAKVLSISDTLMWNWY 275

Query: 274 KRLTTLPMSEID--RMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSI 331
             L+   ++EI   +     G+   +AK ++A EIT   H    A+ A            
Sbjct: 276 TLLSFKSLAEIAALKAEVEGGRNPKDAKVLLAKEITARFHSAALADAAEQDFNNR-SKGG 334

Query: 332 HSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
               +  +S+S       +G+  L+ +A  A ST+EA R +    ++++ + IS+  L++
Sbjct: 335 IPDQIDEVSLS----GAPLGIGALLKQANLAPSTSEANRLIDGGGVRVDGTAISDRGLKL 390

Query: 392 KLQDFDSTGNIKLSFGKKNHIICHL 416
           +       G   +  GK+      L
Sbjct: 391 EA------GTYVVQVGKRKFARVTL 409


>gi|70732895|ref|YP_262666.1| tyrosyl-tRNA synthetase [Pseudomonas fluorescens Pf-5]
 gi|115305818|sp|Q4K517|SYY_PSEF5 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|68347194|gb|AAY94800.1| tyrosyl-tRNA synthetase [Pseudomonas fluorescens Pf-5]
          Length = 399

 Score =  376 bits (967), Expect = e-102,   Method: Composition-based stats.
 Identities = 101/408 (24%), Positives = 168/408 (41%), Gaps = 24/408 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG    +     ++ L     +    G+D TA  LH GH   +  L   Q  GH+ I
Sbjct: 10  LIKRGAEELLVESELIEKLKRGEPLRIKAGFDPTAPDLHLGHTVLINKLRQFQDLGHQVI 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T +IGDPS +  +R  +  +++ EN E  K      +     +    +  N TW
Sbjct: 70  FLIGDFTGMIGDPSGKSATRPPLTREQVLENAETYKSQVFKILDPAKTE----VAFNSTW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +  +   D +R + S ++V RML  +    R    Q ++  EF Y ++Q YD V L  + 
Sbjct: 126 MDKMGPADFIR-LTSQYTVARMLERDDFDKRYSTNQPIAIHEFLYPLVQGYDSVALRAD- 183

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G +L           LT PLL    G  KM K+L   + + + 
Sbjct: 184 ---VELGGTDQKFNLLMGRELQRGYGQEAQCILTMPLLEGLDGVKKMSKSLGNYVGIQE- 239

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATEITT 308
             +P   +    +I DA +  + + L+   M EI+        G    + K  +A EI  
Sbjct: 240 --APGVMYGKLVSIPDALMWRYFELLSFRSMDEINAFKADVDAGANPRDIKIKLAEEIVA 297

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
             HG E A  A  AA            +P I +   E    M +  ++ KAG   +   A
Sbjct: 298 RFHGEEAAANAHRAAGNRMKDGELPDDLPEIELVAAE---DMPIAAVLNKAGLVKNAAMA 354

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           R  L S  ++++  ++ +      +             G+K      L
Sbjct: 355 RDLLGSGGVRVDGEVV-DRTYIYAV-----GSTHVCQAGRKAFARITL 396


>gi|262039163|ref|ZP_06012483.1| tyrosine--tRNA ligase [Leptotrichia goodfellowii F0264]
 gi|261746779|gb|EEY34298.1| tyrosine--tRNA ligase [Leptotrichia goodfellowii F0264]
          Length = 410

 Score =  376 bits (967), Expect = e-102,   Method: Composition-based stats.
 Identities = 112/417 (26%), Positives = 195/417 (46%), Gaps = 33/417 (7%)

Query: 9   LSILSERGFIHQISNPRELDILCSQG-----VVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
             IL  RG   +I N  E      +       +   +G D + + LH GH   L  L   
Sbjct: 17  FDILK-RGC-DEIINESEFKKKLEKSISTNTPLRIKLGIDPSGTDLHFGHAVPLRKLKQF 74

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q  GH+   L+G  T  IGDP+ + E+R+M+ ++++QENI+      S  +         
Sbjct: 75  QDLGHQVFFLIGTFTGRIGDPTGKSETRKMLSAEQVQENIKTYLDQVSLILDLD----KI 130

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            ++ N  WL  +   D+LR + S F+V++M+S E    RL   + +S +EF Y ILQ YD
Sbjct: 131 KVVYNGDWLEKLNLEDVLRLL-SQFTVSQMISREDFAKRLSENKPVSLIEFMYPILQGYD 189

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLS 242
            VEL  +    +++G ++Q  N++ G DL +     +   +  P+L    G  KM K+L+
Sbjct: 190 SVELRAD----VELGATEQKFNLLRGRDLQKNAGQEQQVCMIMPILEGLDGVEKMSKSLN 245

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAK 299
             I +     SP + +    ++ D  +  + + +T +   EI +M +          EAK
Sbjct: 246 NYIGV---KDSPNDMFGKVMSVSDDLMYRYYEVITEVAQEEIAKMKEEINNGTLHPMEAK 302

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV-K 358
           K +  E+  + H  EE++KA       F        +P + +   E    +G++ L+V +
Sbjct: 303 KRLGEEVVKIYHNEEESKKAREWFENVFSKKNLDVDLPEVELEYKE----IGVIDLLVRE 358

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            G  +ST+EARR ++    KIN+  + + K  +K+Q+      + +  GKK  +   
Sbjct: 359 TGLLSSTSEARRLVEQGGFKINDEAVKDVKAVVKIQN-----GMVIRAGKKKIVKVK 410


>gi|226354815|ref|YP_002784555.1| tyrosyl-tRNA synthetase [Deinococcus deserti VCD115]
 gi|226316805|gb|ACO44801.1| putative Tyrosyl-tRNA synthetase (Tyrosine-tRNA ligase)
           [Deinococcus deserti VCD115]
          Length = 411

 Score =  376 bits (967), Expect = e-102,   Method: Composition-based stats.
 Identities = 103/424 (24%), Positives = 178/424 (41%), Gaps = 23/424 (5%)

Query: 1   MPAFKSDF-----LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLT 55
           M   +S+      + IL  RG +  +S       L     +   +G D T   LH GH  
Sbjct: 1   MNEIRSNVPVAEQIEILK-RGVVDLVSEDDLRRKLEKGEPLRVKLGADPTRPDLHLGHAV 59

Query: 56  QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK 115
            L  +   Q  GHK I L+G  T++IGDPS + ++R  +  QE + N +         ++
Sbjct: 60  ILRKMRQFQDLGHKVIMLIGDFTAMIGDPSGKSKTRPPLTLQETRANAQSYLDQCRLILR 119

Query: 116 YGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFN 175
                 +  +  N  WL  + Y D++R + S ++V R+L  +    RL     +S  E  
Sbjct: 120 QEPEVLE--LRFNSEWLEPLGYADIIR-LTSRYTVARILERDDFTKRLNAGTPISMHELL 176

Query: 176 YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT 235
           Y + Q YD V L  +    +++GG+DQ  N + G  L           +T PLL    GT
Sbjct: 177 YPLTQGYDSVALHAD----VELGGTDQLFNNLVGRALQRDYDQEPQVVITLPLLVGLDGT 232

Query: 236 -KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE 294
            KM K+L   I L  E   P+  +     + D  + ++   LT LP   I+    L    
Sbjct: 233 EKMSKSLDNYIGLTDE---PHAMFAGLMKVPDPLLDNYFTLLTDLPRERIEE---LLAGH 286

Query: 295 INEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG--MGL 352
              A + +A E+   +H   + + A              Q++P +++ + ++     + L
Sbjct: 287 PVAAHRELAREVVAWLHPGADLDAAEERFKAV-AKGGIPQNIPQVTVPESDLDAEGRISL 345

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
             L+V AG   S   AR+ +++  +K+N    ++ +  +  +   S G + +  GK    
Sbjct: 346 ARLVVLAGLEPSNGAARKLIQNRGLKLNGETCADPQGYLTREALASEGGMVIQKGKDRFA 405

Query: 413 ICHL 416
              L
Sbjct: 406 RLGL 409


>gi|92115165|ref|YP_575093.1| tyrosyl-tRNA synthetase [Chromohalobacter salexigens DSM 3043]
 gi|91798255|gb|ABE60394.1| tyrosyl-tRNA synthetase [Chromohalobacter salexigens DSM 3043]
          Length = 398

 Score =  376 bits (967), Expect = e-102,   Method: Composition-based stats.
 Identities = 90/415 (21%), Positives = 182/415 (43%), Gaps = 24/415 (5%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +D L++L  RG    +     +  L S   +    G+D TA  LH GH   L  +   Q+
Sbjct: 5   ADALALLK-RGTHEILLEDELVKKLESGRKLRIKAGFDPTAPDLHLGHSVLLTKMRQFQE 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+ + L+G  T  IGDP+ ++ +R+ +   E++ N E  K      +     +    +
Sbjct: 64  LGHQVVFLIGDFTGRIGDPTGKNVTRKPLTEAEVKANAETYKEQVFKILDPALTE----V 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
             N  W+  +   D++ E+ +  +V RML  +    R    QS+S  EF Y ++Q YD V
Sbjct: 120 RFNAEWMSKLSAADMI-ELAAQSTVARMLERDDFEKRYTANQSISIHEFLYPLVQGYDSV 178

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGA 244
            L    +  +++GG+DQ  N++ G ++ +         +T PLL    G  KM K+L   
Sbjct: 179 AL----EADIELGGTDQKFNLLMGREIQKHFGQAPQVVMTMPLLEGLDGVQKMSKSLGNY 234

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKII 302
           + ++    +P   +    ++ D+ +  + + L+     EI+++ +    G    + K  +
Sbjct: 235 VGVD---DTPGVMFNKLVSMPDSLMWRYFELLSLKSNDEIEKIRRSIESGANPRDIKMEL 291

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFA 362
           A E+    HG E A  A  +A            +P + ++ +       +  ++ ++G  
Sbjct: 292 ARELIARYHGEEAAANAHKSAGNQLAEGELPDDLPDVEVAFE--GEQAPIAAVLNRSGLT 349

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            ++ +A+  L +  +K++  +++ + +        +     +  GKK +    L 
Sbjct: 350 NNSAQAKDMLSNGRVKVDGEVVAKDAM------LATGQRYVIQAGKKRYARVTLV 398


>gi|268679288|ref|YP_003303719.1| tyrosyl-tRNA synthetase [Sulfurospirillum deleyianum DSM 6946]
 gi|268617319|gb|ACZ11684.1| tyrosyl-tRNA synthetase [Sulfurospirillum deleyianum DSM 6946]
          Length = 402

 Score =  376 bits (967), Expect = e-102,   Method: Composition-based stats.
 Identities = 110/426 (25%), Positives = 185/426 (43%), Gaps = 35/426 (8%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLT 55
           M     + L+ +  RG I +I +   +  L  +            G+D TA  LH GH  
Sbjct: 1   MEMKIQNALNEIK-RG-ISEIIDEERIVTLIKKYFEKGETFLVKAGFDPTAPDLHLGHTV 58

Query: 56  QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK 115
            L  +  LQK G     L+G  T +IGDP+ ++E+R+ +  + +  N E  K      + 
Sbjct: 59  LLQKMALLQKYGAIVQFLIGDFTGMIGDPTGKNETRKKLTREVVLANAETYKEQVFKILD 118

Query: 116 YGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFN 175
                   +++ N  WL S+    L+ E+ + F+V RML  E    R K +  +S  EF 
Sbjct: 119 PAKT----VVMFNSEWLGSMSASSLI-ELTTTFNVARMLEREDFEKRYKSQMPISISEFL 173

Query: 176 YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASG 234
           Y +LQ YD V +     C ++MGG+DQ  N++ G  L        +   +  PLL    G
Sbjct: 174 YPLLQGYDSVAMK----CDIEMGGTDQKFNLLMGRHLQRVYGIGKEQAVMMMPLLEGLDG 229

Query: 235 T-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK 293
             KM K+L   I + +   +P + +    +I D  +  + + L++  + EI R+     +
Sbjct: 230 VNKMSKSLGNYIGVTE---APADMFGKMLSISDVLMWRYYELLSSKSLEEIARLKHDVEE 286

Query: 294 ---EINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGM 350
                  AK++IA EI T  HG +EA KA          +     +   +         +
Sbjct: 287 GEIHPKHAKEMIAMEIVTRYHGADEALKAQETFNRVHAQNEIPHDIELFT-----CKEPI 341

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            +   +V  G   ST++ARR +K   +K+N   + +E+LQ++       G   L  GK+ 
Sbjct: 342 WIAKALVDCGLEESTSQARRDIKQGGVKLNQIKVEDEQLQLEC------GEYVLQVGKRK 395

Query: 411 HIICHL 416
                +
Sbjct: 396 FAKLKV 401


>gi|83648875|ref|YP_437310.1| tyrosyl-tRNA synthetase [Hahella chejuensis KCTC 2396]
 gi|115305807|sp|Q2S8Y9|SYY_HAHCH RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|83636918|gb|ABC32885.1| tyrosyl-tRNA synthetase [Hahella chejuensis KCTC 2396]
          Length = 400

 Score =  376 bits (967), Expect = e-102,   Method: Composition-based stats.
 Identities = 95/413 (23%), Positives = 177/413 (42%), Gaps = 23/413 (5%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           MP+ +      L +RG    I     ++ L     +    G+D TA  LH GH   +  L
Sbjct: 1   MPSVEESLA--LIKRGAEEIIQEEGLIEKLKRGEPLRIKAGFDPTAPDLHLGHTVLINKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GH+ I L+G  T +IGDP+ +  +R  +  +++ +N +  K      +     +
Sbjct: 59  RQFQDLGHQVIFLIGDFTGMIGDPTGKSATRPPLTKEDVAQNAQTYKEQVFKILDPKKTE 118

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N  W+  +   D++R  G + +V RML  +    R   EQS+S  EF Y ++Q
Sbjct: 119 ----VRFNSEWMDKLSAADMIRLAGQY-TVARMLERDDFHKRYHGEQSISIHEFLYPLVQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGK 239
            YD V L  +    +++GG+DQ  N++ G  L +         +T P+L    G  KM K
Sbjct: 174 GYDSVALRAD----VELGGTDQKFNLLMGRMLQKHYDQEPQVIMTMPILEGLDGVQKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINE 297
           +L   I +N     P   +    +I D  +  + + L+   M+EI+        G+    
Sbjct: 230 SLGNYIGVN---DLPGEMFGKLLSIPDELMWRYFELLSFRDMAEIEDFKVQVNAGENPQN 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K+++A EI    HG E A+ A  +A     +    +++P + + + +      +  ++ 
Sbjct: 287 IKRLLAEEIVARFHGGEAAQSAHKSAGNQVKLGEIPENVPVVHLEESDDQTEFSISYILR 346

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
           +A    +   A+  L   A+ ++ + + +    ++           +  GKK 
Sbjct: 347 RADLVKNGAAAKDVLGRGAVFVDGAQV-DPSFMVQ-----RGSEHVIQAGKKK 393


>gi|302306768|ref|NP_983140.2| ABR192Wp [Ashbya gossypii ATCC 10895]
 gi|299788677|gb|AAS50964.2| ABR192Wp [Ashbya gossypii ATCC 10895]
          Length = 461

 Score =  376 bits (967), Expect = e-102,   Method: Composition-based stats.
 Identities = 138/438 (31%), Positives = 204/438 (46%), Gaps = 34/438 (7%)

Query: 8   FLSILSERGFIHQISNP-RELDILCSQGVV-TAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
            L  L  RG + QIS P   L     +G     Y G D TASSLH G+L  LM+L     
Sbjct: 28  VLDELRARGLVQQISEPVDALVQQLREGKRPRLYCGADPTASSLHLGNLMPLMVLLHCYV 87

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKT---- 121
            GH  ++L+GG T ++GDPS R   R  +      EN+ +I G F  F + G        
Sbjct: 88  RGHDVVALIGGATGMVGDPSGRSTERTALADATRLENVRRISGQFKRFFENGREYHGSRV 147

Query: 122 ------DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFN 175
                  A+++NN  W   +  +D L   G    V  ML  +SV +RL     + F EF+
Sbjct: 148 APAQSGHAVVVNNVEWWKDMGLLDFLARYGRHIRVQNMLGRDSVSARLSSGSGMGFNEFS 207

Query: 176 YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP----KLFALTSPLLTT 231
           Y ILQAYDF  L  ++   +Q+GG DQWGNI  GIDL  RL         F +T PLL T
Sbjct: 208 YQILQAYDFYHLHTHHGVAIQVGGGDQWGNITAGIDLIGRLSPGAAANPAFGVTVPLLLT 267

Query: 232 ASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ 291
           ASG K GK+   A++++  +T  Y  +Q++ N  DADV  F +  T LP+S ID      
Sbjct: 268 ASGAKFGKSAGNAVFVDPVITPSYQLYQFFVNTSDADVARFLRLFTMLPLSAIDEAVAAH 327

Query: 292 --GKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKD----- 344
               +   A++++A E+  ++HG    + A T +   F  +     +P   + +      
Sbjct: 328 TVAPQRRLAQRLLAREVVDLLHGLGHGKDAETVSDVLFGGARV--DLPAGELLRLFTDAG 385

Query: 345 ---EVSRGMGLLTLI-VKAGFATSTNEARRHLKSNAIKI--NNSIISNEKLQIKLQDFDS 398
              E  R   L+ L+ +  G  +S  EARR L   A+ +  + S  + +   +       
Sbjct: 386 ILREAPRSASLVDLMCLATG--SSRAEARRKLVQGAVYLGPDRSRPAQDIADLSP-HMIE 442

Query: 399 TGNIKLSFGKKNHIICHL 416
              + L  GK+   + H+
Sbjct: 443 DRVLLLRIGKQQCYVFHI 460


>gi|126699125|ref|YP_001088022.1| tyrosyl-tRNA synthetase [Clostridium difficile 630]
 gi|254975078|ref|ZP_05271550.1| tyrosyl-tRNA synthetase [Clostridium difficile QCD-66c26]
 gi|255092467|ref|ZP_05321945.1| tyrosyl-tRNA synthetase [Clostridium difficile CIP 107932]
 gi|255100552|ref|ZP_05329529.1| tyrosyl-tRNA synthetase [Clostridium difficile QCD-63q42]
 gi|255306490|ref|ZP_05350661.1| tyrosyl-tRNA synthetase [Clostridium difficile ATCC 43255]
 gi|255314205|ref|ZP_05355788.1| tyrosyl-tRNA synthetase [Clostridium difficile QCD-76w55]
 gi|255516884|ref|ZP_05384560.1| tyrosyl-tRNA synthetase [Clostridium difficile QCD-97b34]
 gi|255649985|ref|ZP_05396887.1| tyrosyl-tRNA synthetase [Clostridium difficile QCD-37x79]
 gi|260683136|ref|YP_003214421.1| tyrosyl-tRNA synthetase [Clostridium difficile CD196]
 gi|260686734|ref|YP_003217867.1| tyrosyl-tRNA synthetase [Clostridium difficile R20291]
 gi|306520061|ref|ZP_07406408.1| tyrosyl-tRNA synthetase [Clostridium difficile QCD-32g58]
 gi|115250562|emb|CAJ68386.1| Tyrosyl-tRNA synthetase (Tyrosine--tRNA ligase) (TyrRS)
           [Clostridium difficile]
 gi|260209299|emb|CBA62678.1| tyrosyl-tRNA synthetase [Clostridium difficile CD196]
 gi|260212750|emb|CBE03875.1| tyrosyl-tRNA synthetase [Clostridium difficile R20291]
          Length = 402

 Score =  376 bits (966), Expect = e-102,   Method: Composition-based stats.
 Identities = 92/409 (22%), Positives = 176/409 (43%), Gaps = 31/409 (7%)

Query: 18  IHQISNPRELDILC-----SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPIS 72
           +  + + +EL             +   +G D +A  +H GH   L  +  LQ  GH+ + 
Sbjct: 15  VDDLIDEKELREKLIKSEKEGKPMIVKLGLDPSAPDIHLGHTVVLRKMKQLQDLGHQIVI 74

Query: 73  LMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL 132
           ++G  T  IGDP+ + ++R+ + ++++  N +  +      +     K   ++  N  WL
Sbjct: 75  IIGDFTGKIGDPTGKSKARKALTTEQVLANAKTYEEQIFKVLD----KEKTIVRFNSEWL 130

Query: 133 CSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYD 192
             + + D+++ + +  +V RML  E  + R + +  +S  EF Y ++QAYD + L    +
Sbjct: 131 AKLNFEDVIK-LAATITVARMLEREDFKKRYEGQMPISVHEFFYPLMQAYDSIAL----E 185

Query: 193 CRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEM 251
             +++GG+DQ  N++ G  L           +  PL+    G  KM K+L   I +++E 
Sbjct: 186 ADIELGGTDQRFNLLMGRSLQREFGMESQIVIMMPLIEGLDGKEKMSKSLGNYIGIDEEA 245

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSE---IDRMAKLQGKEINEAKKIIATEITT 308
                 +Q    I D  ++ +   +T +   E   I+   K       + K  +A EI T
Sbjct: 246 GI---MYQKSMEIPDELIIKYYNLVTDVHPDEVNKIESQLKEGSVNPRDIKMNLAREIVT 302

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
           + HG E A++A       F      + + TI + +D    G  L+ ++V      S +E 
Sbjct: 303 LYHGEESAKEAEERFKSVFQKGQIPEDIQTIQVKED----GFDLIEVLVSNEIVKSKSEV 358

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           RR      +K+N   + +    +K         + +  GKK  +   L 
Sbjct: 359 RRLASQGGVKVNGEKVEDLSTIVKES------ELVVQIGKKKFVKIELV 401


>gi|332030429|gb|EGI70117.1| Putative tyrosyl-tRNA synthetase, mitochondrial [Acromyrmex
           echinatior]
          Length = 426

 Score =  376 bits (966), Expect = e-102,   Method: Composition-based stats.
 Identities = 133/416 (31%), Positives = 207/416 (49%), Gaps = 22/416 (5%)

Query: 22  SNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSII 81
           ++  E+  L ++     Y G+D TA SLH G+L  LM L   Q+ GH+ I+L+GG T +I
Sbjct: 9   TSTNEIVNLLNKSSQCVYAGFDPTADSLHIGNLLILMNLLHWQRAGHQVIALVGGATGLI 68

Query: 82  GDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK-----YGTGKTDA----LMLNNETWL 132
           GDPS R   R  +    I+ENI+ I     +        +   K  A    +++NN  W 
Sbjct: 69  GDPSHRKSERIEIERYVIEENIKSITKNVETIFNNHRYYFWKNKETALKPLIIVNNLDWY 128

Query: 133 CSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYD 192
            ++  I+ ++ IG +F +  ML   SV++RL  E  +SF EF Y + QAYD+++L KNY 
Sbjct: 129 TNVNVIEFIKNIGKYFRMGTMLGRSSVQTRLNSEIGMSFTEFTYQVFQAYDWLQLMKNYK 188

Query: 193 CRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMT 252
           CR Q+GGSDQ GNI+ G DL  +    +++ +T PL+T   G K GK+L  A+WL+   +
Sbjct: 189 CRFQIGGSDQMGNIMSGYDLITKSMRKEVYGITLPLITAEGGKKFGKSLLNAVWLSPIKS 248

Query: 253 SPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKKIIATEITTMV 310
           S +  +QY+    D+DV  F K  T +P++ I  + K      E  +A+K++A ++T +V
Sbjct: 249 SSFQLYQYFIRAKDSDVEKFLKLFTFIPLNTITEIVKNHMNDPEQRKAQKLLAEQVTLLV 308

Query: 311 HGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIVKAG 360
           HG E    A  A+   +D SI S                +I       G+ +  L  K  
Sbjct: 309 HGEEGLLAAKRASAALYDKSIESFIKLNASELTDVFEGATIVDVLSEPGITVYELAKKVK 368

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ-DFDSTGNIKLSFGKKNHIICH 415
              + ++A R + +    +N   I+N    I       S     L  GKK + I  
Sbjct: 369 CFKTDHDAERIITAGGFYVNYQKITNLNEIIVPGIHILSNNVSLLRVGKKTYHIVR 424


>gi|332530284|ref|ZP_08406230.1| tyrosyl-tRNA synthetase [Hylemonella gracilis ATCC 19624]
 gi|332040270|gb|EGI76650.1| tyrosyl-tRNA synthetase [Hylemonella gracilis ATCC 19624]
          Length = 415

 Score =  376 bits (966), Expect = e-102,   Method: Composition-based stats.
 Identities = 101/410 (24%), Positives = 178/410 (43%), Gaps = 27/410 (6%)

Query: 15  RGFIHQISNPRELDILCSQG----VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           RG    I     +  L         +   +G D TA  +H GH   L  L  LQ  GH+ 
Sbjct: 25  RGCEELIPEDDWVKKLSRSEATHTPLRIKLGLDPTAPDIHLGHTVVLNKLRQLQDLGHQV 84

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           I L+G  TS+IGDPS R+ +R  + S++I+ N E      S  +     +    +  N  
Sbjct: 85  IFLIGDFTSLIGDPSGRNSTRPPLTSEQIKANAETYYKQASLVLDPQRTE----IRYNSE 140

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           W   +  + ++ ++ + ++V RM+  +    R +    +S  EF Y ++Q YD V L  +
Sbjct: 141 WCLPLGSMGMI-QLAAKYTVARMMERDDFTKRYQAGTPISVHEFLYPLMQGYDSVALKSD 199

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNK 249
               L++GG+DQ  N++ G  L +         LT PLL    G  KM K+    I +++
Sbjct: 200 ----LELGGTDQKFNLLMGRHLQQEHGQEPQCILTMPLLVGLDGVDKMSKSKHNYIGISE 255

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATEIT 307
           +  +    +    +I D  +  +   L+   ++EI  + K    G+   +AK  +A EIT
Sbjct: 256 DANT---MYAKVLSISDVLMWDWYTLLSFKSLAEIAALKKEVEAGRNPKDAKVALAKEIT 312

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
           T  HG   AE A    +           +   +++  E    +G+  L+ +AG   S+ E
Sbjct: 313 TRFHGAAAAEAAEQDFINR-SKGGIPDEVEEQTLAL-EGGAPVGIAALLKQAGLVASSGE 370

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
             R +    ++++ + +S++ L++        G   L  GK+      L 
Sbjct: 371 GNRLIDGGGVRVDGNTVSDKGLKL------GAGVYVLQVGKRKFKKVTLS 414


>gi|311693249|gb|ADP96122.1| LOW QUALITY PROTEIN: tyrosyl-tRNA synthetase [marine bacterium
           HP15]
          Length = 403

 Score =  375 bits (964), Expect = e-102,   Method: Composition-based stats.
 Identities = 96/406 (23%), Positives = 175/406 (43%), Gaps = 22/406 (5%)

Query: 15  RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLM 74
           RG    I     ++ L     +    G+D TA  LH GH   +  L   Q  GH+ + L+
Sbjct: 16  RGVDELIPEDELIEKLKEGRPLRIKAGFDPTAPDLHLGHTVLINKLRQFQDLGHEVMFLI 75

Query: 75  GGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCS 134
           G  T +IGDP+ +  +R  +  Q++ EN    K      +     +    ++ N  W+  
Sbjct: 76  GDFTGMIGDPTGKSATRPPLTEQQVAENAVSYKEQVFKILDPAKTR----VMFNSDWMGK 131

Query: 135 IKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCR 194
           +   D+++  G + +V RML  +    R + EQ+++  EF Y ++Q YD V +    +  
Sbjct: 132 MSAADMIKLAGQY-TVARMLERDDFTKRYRAEQAIAIHEFLYPLVQGYDSVAM----EAD 186

Query: 195 LQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTS 253
           +++GG+DQ  N++ G  L +         LT P+L    G  KM K+L   + +N    S
Sbjct: 187 VELGGTDQKFNLLMGRILQKHYGQSPQVILTMPILEGLDGVQKMSKSLGNYVGVN---DS 243

Query: 254 PYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKKIIATEITTMVH 311
           P   +    ++ D  +  + + L+  P++E+D   K    G      KK++A EI T  H
Sbjct: 244 PGEMYTKLLSMPDDLLWRYFELLSFRPLAEVDEFRKAVAGGANPPGLKKLLAEEIITRFH 303

Query: 312 GREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRH 371
             E A  A  +A     +     ++PT+ +   E    + +  ++  AG   +   AR  
Sbjct: 304 DEEAARTAHKSAGNRVALGEIPDNVPTVEVPL-EGQSEIPMAAVLRLAGLVKNGAAARDV 362

Query: 372 LKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           L   A+ ++      +++ ++  D        +  GKK      + 
Sbjct: 363 LGRGAVFVDGQKFEGDRMFVEGDD------CVIQAGKKKIARVLIT 402


>gi|209526728|ref|ZP_03275251.1| tyrosyl-tRNA synthetase [Arthrospira maxima CS-328]
 gi|209492860|gb|EDZ93192.1| tyrosyl-tRNA synthetase [Arthrospira maxima CS-328]
          Length = 415

 Score =  375 bits (964), Expect = e-102,   Method: Composition-based stats.
 Identities = 101/417 (24%), Positives = 176/417 (42%), Gaps = 26/417 (6%)

Query: 2   PAFKSDFLSILSERGFIHQISNPREL--DILCSQGVVTAYIGYDLTASSLHAGHLTQLML 59
           P  +     I  E    +  +    L   +  S   +   +G D T S +H GH      
Sbjct: 20  PRLRRGVTDIFPE--LPNSENPEENLGQRLALSTRPLRIKLGIDPTGSDIHLGHSIIFRK 77

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG 119
           L   Q  GH  + ++G  T+ IGDP+ + E RR +  +++++N +         + + T 
Sbjct: 78  LRAFQDAGHTAVLIIGDFTARIGDPTGKSEVRRQLTPEQVEQNAQTYLEQLRPILDFDTP 137

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
                +  N  WL  +     L ++ S  +V +ML+ E    R ++E  +   EF Y ++
Sbjct: 138 -GRLEIRRNSEWLSKLDLAKTL-DLLSRMTVGQMLAKEGFSLRFEQENPIYLHEFLYPLM 195

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMG 238
           Q YD V +    +  +++GG+DQ  N+  G DL         F L  P+L    G  KM 
Sbjct: 196 QGYDSVAV----EADVELGGTDQKFNLAVGRDLQRYFGQTPQFGLLMPILIGTDGVQKMS 251

Query: 239 KTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEA 298
           K+L   + L+++   P   +     + D  +  + + LT  P++E+            + 
Sbjct: 252 KSLGNYVGLSED---PLTMYSKLEKVPDGLIAQYFELLTDYPLAELPE-------NPRDR 301

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSI-HSQHMPTISISKDEVSRGMGLLTLIV 357
           +K++A +I T  HG   A  A  AA+         ++ +P  S+S  EV     L  ++ 
Sbjct: 302 QKLLALDIVTQYHGEAAALAAQKAAVNLVQGDATRAEAVPEFSLS--EVEFPAKLFYILS 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +G   S +EARR +   A+KI+   I +  L +   +        L  GKK  I  
Sbjct: 360 ASGLCKSGSEARRQIAGGAVKIDGDRIEDPNLVVASAEELKGR--VLQVGKKKFIRL 414


>gi|153939021|ref|YP_001390553.1| tyrosyl-tRNA synthetase [Clostridium botulinum F str. Langeland]
 gi|152934917|gb|ABS40415.1| tyrosine--tRNA ligase [Clostridium botulinum F str. Langeland]
 gi|295318634|gb|ADF99011.1| tyrosine--tRNA ligase [Clostridium botulinum F str. 230613]
          Length = 400

 Score =  375 bits (964), Expect = e-102,   Method: Composition-based stats.
 Identities = 109/406 (26%), Positives = 185/406 (45%), Gaps = 33/406 (8%)

Query: 18  IHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPIS 72
           + +I N  +L     +       +T  +G D TA  +H GH   L  +  LQ  GH+ + 
Sbjct: 15  VDEIINVEDLKSKLEKSQKTGKPLTVKLGLDPTAPDIHIGHSVVLRKIRQLQDLGHRAVI 74

Query: 73  LMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL 132
           ++G  T  IGDP+ + ++R+ +  +E+  N +  +      I             N  WL
Sbjct: 75  IIGDFTGRIGDPTGKSKTRKPLTQEEVMFNAKTYEEQIFKIIDKDKTDLK----FNSEWL 130

Query: 133 CSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYD 192
             +   D + E+ S ++V RML  E  + R +   S+   EF Y +LQA+D V L  +  
Sbjct: 131 GKLSLRDTI-ELTSKYTVARMLEREDFKKRFESHSSIGIHEFFYPLLQAFDSVSLKAD-- 187

Query: 193 CRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEM 251
             +++GG+DQ  N++ G  + +        A+  PLL    G  KM K+L   I +N++ 
Sbjct: 188 --IELGGTDQRFNLLMGRTIQKDFDQESQVAILMPLLEGTDGKDKMSKSLGNYIGINEDA 245

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKIIATEITT 308
               + +    +I D  +V + +  T +   E+ +M    + +     + K  +A EI  
Sbjct: 246 N---DIYGKVMSIPDGMIVKYYELATDIHPDEVAKMKARLEEENVNPRDIKMELAKEIVR 302

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
           + HG E + KA       F      + + TI ++  +      ++ LIVKA FA S NEA
Sbjct: 303 LYHGEEASVKAEANFKNIFQQGNIPEDIDTIKVNLTK----TNIVDLIVKAKFAPSKNEA 358

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           RR +K  A+KIN   + +E+ ++K +D        L  GKK  I  
Sbjct: 359 RRLVKQGAVKINGEKV-DEECKVKNED-------ILQVGKKKFIKI 396


>gi|326318746|ref|YP_004236418.1| tyrosyl-tRNA synthetase [Acidovorax avenae subsp. avenae ATCC
           19860]
 gi|323375582|gb|ADX47851.1| tyrosyl-tRNA synthetase [Acidovorax avenae subsp. avenae ATCC
           19860]
          Length = 411

 Score =  375 bits (964), Expect = e-102,   Method: Composition-based stats.
 Identities = 99/409 (24%), Positives = 174/409 (42%), Gaps = 30/409 (7%)

Query: 15  RGFIHQISNPRELDILCSQG----VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           RG    +        L         +   +G D TA  +H GH   L  +  LQ  GH+ 
Sbjct: 24  RGTDELLPREEWTRKLARSEATGVPLRIKLGLDPTAPDIHIGHTVVLNKMRQLQDLGHQV 83

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           I L+G  T++IGDPS R+ +R  +  ++I+ N E      +  +     +    +  N  
Sbjct: 84  IFLIGDFTTLIGDPSGRNTTRPPLTPEQIKINAETYYTQAAKVLDPARTE----IRYNSE 139

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           W   +    ++ ++ + ++V RM+       R     S+S  EF Y +LQ YD V L  +
Sbjct: 140 WSEPLGAAGMI-QLAAKYTVARMMERNDFHQRFTDGSSISLHEFLYPLLQGYDSVALKSD 198

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNK 249
               L++GG+DQ  N++ G  L +         LT PLL    G  KM K+ +  I + +
Sbjct: 199 ----LELGGTDQKFNLLMGRHLQQEYGQEPQCILTMPLLVGLDGVDKMSKSKNNYIGITE 254

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEIT 307
           +  +    +    +I D  +  +   L+   ++EI   R     G+   +AK ++A EIT
Sbjct: 255 DANT---MFAKVLSISDDLMWDWYTLLSFKSLAEIAALRQEVEGGRNPKDAKVMLAREIT 311

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
           T  H    A+ A                +P +S+        +G+  L+ +A  A ST+E
Sbjct: 312 TRFHSAAAADAAEADFANR-SKGGVPDEIPEVSLG----GAPLGIGALLKQANLAPSTSE 366

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           A R +    ++++ +++S+  L++        G   L  GK+      L
Sbjct: 367 ANRLIDGGGVRVDGAVVSDRGLKLDA------GTYVLQVGKRKFARVAL 409


>gi|225849740|ref|YP_002729974.1| tyrosyl-tRNA synthetase [Persephonella marina EX-H1]
 gi|225645311|gb|ACO03497.1| tyrosyl-tRNA synthetase [Persephonella marina EX-H1]
          Length = 410

 Score =  375 bits (964), Expect = e-102,   Method: Composition-based stats.
 Identities = 103/387 (26%), Positives = 170/387 (43%), Gaps = 23/387 (5%)

Query: 34  GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRM 93
             +    G+D TA  LH GH   L  L   Q+ GH    ++G  T++IGDPS RD++R  
Sbjct: 34  RPLIVKAGFDPTAPDLHLGHTVLLQKLRTFQQLGHTVYFIIGDFTAMIGDPSGRDKTRPP 93

Query: 94  MRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRM 153
           +  +++ EN +  K      +         +++ N  WL  +   DL++ + + ++V RM
Sbjct: 94  LTKEQVLENAKTYKEQVFKVLD----PEKTVVVFNSEWLGDMTAQDLIK-LTARYTVARM 148

Query: 154 LSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLG 213
           L  +  + R K  + ++  EF Y +LQAYD V +  +    +++GGSDQ  N++ G D+ 
Sbjct: 149 LERDDFKKRFKENKPIAIHEFIYPLLQAYDSVAIKAD----VELGGSDQRFNLLIGRDIQ 204

Query: 214 ERLK-TPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVS 271
           +         A+  PLL    G  KM K+    I + +    P   +    +I D  +  
Sbjct: 205 KEYGIEKPQVAILLPLLVGTDGVRKMSKSYGNYIGITE---PPEEMFGKLMSIPDDLMWD 261

Query: 272 FAKRLTTLPMSEIDRMAKLQGK---EINEAKKIIATEITTMVHGREEAEKAATAAMECFD 328
           + + LT L + EI++M     +      E KK +A  I T  H  E A KA         
Sbjct: 262 YWELLTDLSIEEIEKMKMDVEEGVLHPMEVKKQLAMYIVTRFHDEESAIKAREHFERVHS 321

Query: 329 MSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEK 388
                + +             + L  L+ K GFA S +EARR +K  A+KI+    ++  
Sbjct: 322 KREIPEEI-PEPEIIVATEGKIPLYELVFKTGFAPSKSEARRLIKGGAVKIDGEKFTDPY 380

Query: 389 LQIKLQDFDSTGNIKLSFGKKNHIICH 415
            ++ L     T    L  GK+      
Sbjct: 381 FEVDL-----TKEFVLQVGKRKFARIK 402


>gi|307546701|ref|YP_003899180.1| tyrosyl-tRNA synthetase [Halomonas elongata DSM 2581]
 gi|307218725|emb|CBV43995.1| tyrosyl-tRNA synthetase [Halomonas elongata DSM 2581]
          Length = 399

 Score =  375 bits (963), Expect = e-102,   Method: Composition-based stats.
 Identities = 98/415 (23%), Positives = 184/415 (44%), Gaps = 23/415 (5%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +D L++L  RG    +        L S   +    G+D TA  LH GH   L  +   Q 
Sbjct: 5   ADALALLK-RGTHEILLEEELEKKLASGRTLRIKAGFDPTAPDLHLGHSVLLTKMRQFQD 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+ I L+G  T  IGDP+ ++ +R+ +  +E++ N E  K      +     +    +
Sbjct: 64  LGHEVIFLIGDFTGRIGDPTGKNVTRKPLTEEEVRANAETYKEQVFKVLDPAKTE----V 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
             N  W  S+   D++ E+ +  +V RML  +    R +  QS+S  EF Y ++Q YD V
Sbjct: 120 RFNAEWFSSMSAADMI-ELAAQSTVARMLERDDFEKRYRAGQSISIHEFLYPLVQGYDSV 178

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGA 244
            L    +  +++GG+DQ  N++ G ++ +         +T PLL    G  KM K+L   
Sbjct: 179 AL----EADIELGGTDQKFNLLMGREVQKHFDQESQVVITMPLLEGLDGVQKMSKSLGNY 234

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKII 302
           + +++   +P   +    ++ D+ +  +   L+     EID  + +  QG    + K  +
Sbjct: 235 VGVDE---APGAMFNKLVSMPDSLMWRYFDLLSLKSNEEIDALKHSVEQGANPRDIKMEL 291

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFA 362
           A E+    HG E A  A  +A          + +P + +   E S    +  ++ +AG  
Sbjct: 292 ARELIGRYHGEEAAANAHRSAGNQLADGELPEDLPEVDVD-FEGSDRAPIAAVLNRAGLV 350

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            ++ +A+  L +  +K++  +++ + +       D+     +  GKK +    L 
Sbjct: 351 QNSAQAKDMLGNGRVKVDGEVVARDHM------LDTGKRYVIQAGKKRYARVTLT 399


>gi|255292552|dbj|BAH89665.1| tyrosyl-tRNA synthetase [uncultured bacterium]
          Length = 413

 Score =  375 bits (963), Expect = e-102,   Method: Composition-based stats.
 Identities = 101/393 (25%), Positives = 179/393 (45%), Gaps = 25/393 (6%)

Query: 28  DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFR 87
               S   +   +G D TA  +H GH   L  L  LQ  GH+ I L+G  TS+IGDPS R
Sbjct: 41  RSEASGQPLRIKLGLDPTAPDIHIGHTVVLNKLRQLQDLGHQVIFLIGDFTSLIGDPSGR 100

Query: 88  DESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSF 147
           + +R  + +++I+ N E  K      +     +    +  N  W  ++    ++ ++ + 
Sbjct: 101 NSTRPPLSAEQIRANAETYKAQAFKVLDPARTE----LRYNSEWSDALGARGMI-QLAAR 155

Query: 148 FSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNII 207
           ++V RM+       R K    +S  EF Y ++Q YD V L  +    +++GG+DQ  N++
Sbjct: 156 YTVARMMERNDFAERFKAGTPISVHEFLYPLMQGYDSVALKSD----IELGGTDQKFNLL 211

Query: 208 CGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDD 266
            G  L +         LT PLL    G  KM K+    + + ++  +    +    +I D
Sbjct: 212 VGRHLQQEYGQEPQCILTMPLLEGLDGVEKMSKSKGNYVGITEDANT---MFAKVLSISD 268

Query: 267 ADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAM 324
             +  +   L+   ++EI+  +     G+   +AK ++A EIT   H    AE A     
Sbjct: 269 ELMWRWYTLLSFRSIAEIEALKAEVAGGRNPKDAKVMLAKEITARFHSAAAAEAAEADF- 327

Query: 325 ECFDMSIHSQHMPTISISKDEVSR-GMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSI 383
                     H+P IS+   E    G+GL+  + ++G A ST+EA R +    +++++S+
Sbjct: 328 AHRSRGGVPDHIPEISLPTGEGGALGIGLV--LKQSGLAPSTSEANRLIDGGGVRVDSSV 385

Query: 384 ISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +S++ L++K       G   +  GK+      L
Sbjct: 386 VSDKGLKLKA------GTYVVQVGKRKFARVTL 412


>gi|187780180|ref|ZP_02996653.1| hypothetical protein CLOSPO_03776 [Clostridium sporogenes ATCC
           15579]
 gi|187773805|gb|EDU37607.1| hypothetical protein CLOSPO_03776 [Clostridium sporogenes ATCC
           15579]
          Length = 400

 Score =  374 bits (962), Expect = e-101,   Method: Composition-based stats.
 Identities = 110/406 (27%), Positives = 185/406 (45%), Gaps = 33/406 (8%)

Query: 18  IHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPIS 72
           + +I N  +L     +       +T  +G D TA  +H GH   L  +  LQ  GH+ + 
Sbjct: 15  VDEIINVEDLKNKLEKSQKTGKPLTVKLGLDPTAPDIHIGHSVVLRKIRQLQDLGHRAVI 74

Query: 73  LMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL 132
           ++G  T  IGDP+ + ++R+ +  +E+  N +  +      I             N  WL
Sbjct: 75  IIGDFTGRIGDPTGKSKTRKPLTQEEVMFNAKTYEEQIFKIIDKDKTDLK----FNSEWL 130

Query: 133 CSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYD 192
             +   D + E+ S ++V RML  E  + R +   S+   EF Y +LQA+D V L  +  
Sbjct: 131 GKLSLRDTI-ELTSKYTVARMLEREDFKKRFESHSSIGIHEFFYPLLQAFDSVTLKAD-- 187

Query: 193 CRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEM 251
             +++GG+DQ  N++ G  + +        A+  PLL    G  KM K+L   I +N++ 
Sbjct: 188 --IELGGTDQRFNLLMGRTIQKDFDQESQVAILMPLLEGTDGKDKMSKSLGNYIGINEDA 245

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE---INEAKKIIATEITT 308
               + +    +I D  +V + +  T +   E+ ++     KE     + K  +A EI  
Sbjct: 246 N---DIYGKVMSIPDEMIVKYYELATDIHPDEVAKIKTKLEKENVNPRDVKMELAKEIVR 302

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
           + HG E + KA       F      + + T+  + DE      ++ LIVKA FA S NEA
Sbjct: 303 LYHGEEASIKAEENFKNIFQQGNMPEDIDTLEANLDE----TNIVDLIVKAEFAPSKNEA 358

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           RR +K  A+K+N   + +E+ ++K +D        L  GKK  I  
Sbjct: 359 RRLVKQGAVKVNGEKV-DEECKVKNED-------ILQVGKKKFIKI 396


>gi|242309164|ref|ZP_04808319.1| tyrosyl-tRNA synthetase [Helicobacter pullorum MIT 98-5489]
 gi|239524205|gb|EEQ64071.1| tyrosyl-tRNA synthetase [Helicobacter pullorum MIT 98-5489]
          Length = 404

 Score =  374 bits (962), Expect = e-101,   Method: Composition-based stats.
 Identities = 103/390 (26%), Positives = 175/390 (44%), Gaps = 28/390 (7%)

Query: 32  SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESR 91
                    G+D TA  LH GH   L  L   QK G +   L+G  T +IGDPS + E+R
Sbjct: 37  EGKTFKVKAGFDPTAPDLHLGHTVLLQKLATFQKYGGRVYFLIGDFTGMIGDPSGKSETR 96

Query: 92  RMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVN 151
           + +  +++  N +  +   +  +      +   ++ N  WL  +    ++ E+ + FSV 
Sbjct: 97  KPLSKEQVLANAKTYQEQVTKVLD----SSKMEIVFNSKWLDELGTRGMI-ELSAKFSVA 151

Query: 152 RMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGID 211
           RML  +    R K +  +S +EF Y +LQ YD V L    DC ++ GG+DQ  N++ G  
Sbjct: 152 RMLERDDFEKRFKAQSPISIVEFFYPLLQGYDSVAL----DCDIECGGTDQKFNLLMGRH 207

Query: 212 LGERLKT-PKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADV 269
           L        +   +  PLL    G  KM K+L   + + +E   P   +    +I D+ +
Sbjct: 208 LQRAYGMSKEQSVVMVPLLEGLDGVNKMSKSLGNYVGITQE---PKEMFGRLLSISDSLM 264

Query: 270 VSFAKRLTTLPMSEIDRMAKLQGK---EINEAKKIIATEITTMVHGREEAEKAATAAMEC 326
             + + L+T  + EI  + +   K        K+ +A EI T  + +E AE A    ++ 
Sbjct: 265 WRYYELLSTKSLQEIAELKEGVEKGSLHPKAVKENLALEIITRYYNKESAEAAREEFIKV 324

Query: 327 FDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISN 386
           F        MPT      E + G+ +  L+ +   +TS++EA R +K   +KIN   ++N
Sbjct: 325 FSKDELPSDMPTF-----EKNAGIWIAQLMNECALSTSSSEALRLIKQGGVKINGERLTN 379

Query: 387 EKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            KL ++       G   +  GK+      +
Sbjct: 380 TKLNLEA------GEYVIQAGKRKFARILI 403


>gi|284098530|ref|ZP_06385916.1| Tyrosyl-tRNA synthetase [Candidatus Poribacteria sp. WGA-A3]
 gi|283830468|gb|EFC34659.1| Tyrosyl-tRNA synthetase [Candidatus Poribacteria sp. WGA-A3]
          Length = 407

 Score =  374 bits (962), Expect = e-101,   Method: Composition-based stats.
 Identities = 98/415 (23%), Positives = 184/415 (44%), Gaps = 34/415 (8%)

Query: 9   LSILSERGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           + ++ ER           +     +G  +    G+D TA  LH GH+  +  L   Q+ G
Sbjct: 18  VDVIQEREL------EDRVRASLKEGSPLRVKAGFDPTAPDLHLGHIVLIQKLRHFQELG 71

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+ I L+G  T +IGDP+   E+R+++  +++  N +  +     F      KT      
Sbjct: 72  HEAIFLIGDFTGMIGDPTGVSETRKVLSKEQVLANAKTYERQI--FKTLDPEKTRVEF-- 127

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W+  ++  D + E+ S +++ RML  +    R + ++ +   EF Y ++Q YD V L
Sbjct: 128 NSRWMRDMRAQD-IVELCSHYNLARMLERDDFSKRYREQKPIGVHEFLYPLVQGYDSVAL 186

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIW 246
               +  +++GG+DQ  N++ G DL           +T PLL    G  KM K+   AI 
Sbjct: 187 ----EADVELGGTDQTFNLLVGRDLQRDWGQVPQIVITMPLLEGTDGVRKMSKSFGNAIA 242

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           L  E   P + +    +I D  +  + + LT+  +  + +      +   EAK  +A  +
Sbjct: 243 LEDE---PSDMFGKIMSISDDLMFRYYELLTSEDLDAVKQ------RHPKEAKLDLAGAM 293

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMP-TISISKDEVSRG----MGLLTLIVKAGF 361
            T  HG +   +A     + F      +    T++++  + S      +GL+ L+++ G 
Sbjct: 294 VTRYHGADAGRQAKEDFEQKFRKREFPEQPDVTVTLTAADFSDPNNPSIGLVDLLMRTGL 353

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             S  EARR +   A+ +N     +    + LQ   S  + ++  GK+ + +  +
Sbjct: 354 LPSKGEARRLIAQGAVVVNEERCQDSTAVLPLQ---SNESYQMKIGKRKYALVQV 405


>gi|86606736|ref|YP_475499.1| tyrosyl-tRNA synthetase [Synechococcus sp. JA-3-3Ab]
 gi|115305823|sp|Q2JSX8|SYY_SYNJA RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|86555278|gb|ABD00236.1| tyrosyl-tRNA synthetase [Synechococcus sp. JA-3-3Ab]
          Length = 417

 Score =  374 bits (961), Expect = e-101,   Method: Composition-based stats.
 Identities = 97/417 (23%), Positives = 180/417 (43%), Gaps = 29/417 (6%)

Query: 9   LSILSERGFIHQISNPRE----LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           ++ +++RG + ++           +  +   +   +G D T   LH GH   L  L   Q
Sbjct: 21  IAEITQRG-VAEVFPGGAAALAERLATTDRPLRVKLGIDPTRPDLHLGHAVVLRKLRQFQ 79

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GH  I L+G  T+++GDP+ + E+R  +   E++EN           + + T      
Sbjct: 80  DAGHVAILLIGDFTALVGDPTGQSEARPRLTPAEVEENARTYLEQAGKILDFETP-GRLE 138

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           +  N  WL  +   +L+ E+ +  +V +ML+ E    R +    +   EF Y +LQ YD 
Sbjct: 139 VRRNSEWLARLTLSELI-ELQAQMTVGQMLAKEDFAQRYRSGTPIYLHEFLYPLLQGYDS 197

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSG 243
           V L    +  +++GG+DQ  N++ G +L         F LT PLL    G  KM K+ + 
Sbjct: 198 VAL----EADVELGGTDQRFNLLVGRELQLWKGQTPQFCLTVPLLEGLDGYQKMSKSKNN 253

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIA 303
            + L ++   P   +     + D  V  + + LT++P SE+         +  + + ++A
Sbjct: 254 YVGLTED---PLTMYSKLEKVPDQLVERYFELLTSVPPSEL-------PADPRQRQILLA 303

Query: 304 TEITTMVHGREEAEKAATAAMECFDMS--IHSQHMPTISISKDEVSRGMGLLTLIVKAGF 361
             +    H  E AE+A   A         + +  +PT +I    +S  + L  ++ ++G 
Sbjct: 304 KTLVAQFHSSEAAEEAQRTAQALVLQGNLVETGSIPTFAIQC--LSYPVKLSYILRESGL 361

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLCG 418
             S  EARR ++  A++++   + +  L+             L  GKK      + G
Sbjct: 362 CKSAAEARRQIQGGAVRLDGQKVEDPDLEFAQASELDGR--VLQVGKKAFCRL-VVG 415


>gi|47211197|emb|CAF95269.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 480

 Score =  374 bits (960), Expect = e-101,   Method: Composition-based stats.
 Identities = 116/429 (27%), Positives = 204/429 (47%), Gaps = 25/429 (5%)

Query: 12  LSERGFIHQISNP----RELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           L +RG + +         +L  L   G  T Y G+D TA SLH G+L  L+ L   +  G
Sbjct: 48  LYKRGVLKESFPESAAQDQLPQLLQAGSQTVYCGFDPTADSLHVGNLLALIALLHFRNAG 107

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSS--------FIKYGTG 119
           H  ++++GG T+ IGDPS +   R  + +   + N   I+             F      
Sbjct: 108 HHVLAVVGGATAQIGDPSGKARERERLSADTAEANTRGIRESLQRIFTNHELYFHDSAKK 167

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
                +LNN +W      ++ L E G  F +  MLS  SV++RL+    +S  EF Y + 
Sbjct: 168 LGTVTVLNNLSWYKDRGVVEFLAEAGRHFRMGTMLSRHSVQARLRSPDGMSLAEFTYQVF 227

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK 239
           QA+DF  L + Y C++Q+GG+DQ GN++ G +   ++   +++ L  PL+T++ G K+GK
Sbjct: 228 QAHDFYHLNQIYGCKIQLGGTDQLGNLMSGHEYIHKVSGEEVYGLAIPLVTSSVGDKLGK 287

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NE 297
           T   A+WLN++ TSP+  +Q++  + D+ +  + K  T LP++E++R+ + Q ++     
Sbjct: 288 TAGNAVWLNRDRTSPFQLYQFFLRLPDSGIERYLKLFTFLPLAEVERLMEQQREDPGKRL 347

Query: 298 AKKIIATEITTMVHGREEAEKAAT----------AAMECFDMSIHSQHMPTISISKDEVS 347
           A K +A E+T +VHG+E  + A             A+E        +        +  + 
Sbjct: 348 AHKRLAAEVTKLVHGKEGLDSAKRCTNVLYHNSVQALEEMSDGELQELFQEAPFHELLLE 407

Query: 348 RGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ-DFDSTGNIKLSF 406
            G  ++    K     + ++    +   A+ IN++ +   +  +  +    S G   +  
Sbjct: 408 PGTTVIDACRKVDAIPAGHKGYLMVSEGAVWINHTRVDKPEQVLIPKLHILSNGLTLIRV 467

Query: 407 GKKNHIICH 415
           GKKN  I  
Sbjct: 468 GKKNFSIIK 476


>gi|319789980|ref|YP_004151613.1| tyrosyl-tRNA synthetase [Thermovibrio ammonificans HB-1]
 gi|317114482|gb|ADU96972.1| tyrosyl-tRNA synthetase [Thermovibrio ammonificans HB-1]
          Length = 407

 Score =  374 bits (960), Expect = e-101,   Method: Composition-based stats.
 Identities = 98/391 (25%), Positives = 166/391 (42%), Gaps = 22/391 (5%)

Query: 29  ILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRD 88
            L S   +    G+D TA  LH GH   L  L   Q+ GH+   L+G  T++IGDP+ ++
Sbjct: 26  KLKSGRKLRIKAGFDPTAPDLHLGHTVLLWKLRDFQELGHEVYFLIGDFTAMIGDPTGKN 85

Query: 89  ESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFF 148
           E+R  +  +E+ +N E         +         +++ N  WL  +   DL++ + S +
Sbjct: 86  ETRPPLTREEVLKNAETYAQQVFKILD----PEKTVVVFNSEWLGQMSAADLIK-LASKY 140

Query: 149 SVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIIC 208
           +V RML  +    R K  + +   EF Y +LQ YD V L  +    +++GG+DQ  N++ 
Sbjct: 141 TVARMLERDDFEKRFKEGRPIHIHEFIYPLLQGYDSVVLKAD----VELGGTDQKFNLLM 196

Query: 209 GIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDA 267
           G  L       +   +  P+L    G  KM K+L   I +   +  P   +     I D 
Sbjct: 197 GRHLQREYGQEEQVCIMMPILEGLDGVQKMSKSLGNYIGI---LEPPEEQFGKVMRISDE 253

Query: 268 DVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAKKIIATEITTMVHGREEAEKAATAAM 324
            +  + + +T +P  EI+ M +   +      EAKK +A  I    HG E A++A     
Sbjct: 254 LMWRYYRLVTRVPEEEIEEMERAVKEGRLHPMEAKKRLAETIVATFHGEEAAKRAREHFE 313

Query: 325 ECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSII 384
             F                +     + L  L+   G   ST+E RR ++  A++I+   I
Sbjct: 314 RVFSRRELPPE--IPEPEVEVPENPIWLPKLLKILGLVKSTSEGRRQIRGGAVRIDGRKI 371

Query: 385 SNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            +E  ++        G   +  GK+      
Sbjct: 372 LDEDYKVD----LLAGEFVVQVGKRRFAKIK 398


>gi|120612682|ref|YP_972360.1| tyrosyl-tRNA synthetase [Acidovorax citrulli AAC00-1]
 gi|120591146|gb|ABM34586.1| tyrosyl-tRNA synthetase [Acidovorax citrulli AAC00-1]
          Length = 410

 Score =  374 bits (960), Expect = e-101,   Method: Composition-based stats.
 Identities = 100/409 (24%), Positives = 173/409 (42%), Gaps = 30/409 (7%)

Query: 15  RGFIHQISNPRELDILCSQG----VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           RG    +        L         +   +G D TA  +H GH   L  +  LQ  GH+ 
Sbjct: 24  RGVEELLPRDEWTRKLARSEATGIPLRIKLGLDPTAPDIHIGHTVVLNKMRQLQDLGHQV 83

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           I L+G  T++IGDPS R+ +R  +  ++I+ N E      S  +     +    +  N  
Sbjct: 84  IFLIGDFTTLIGDPSGRNSTRPPLTPEQIKVNAETYYRQASMVLDPAKTE----IRYNSE 139

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           W   +    ++ ++ + ++V RM+       R     S+S  EF Y +LQ YD V L  +
Sbjct: 140 WCEPLGAAGMI-QLAAKYTVARMMERNDFHQRFTDGSSISLHEFLYPLLQGYDSVALRSD 198

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNK 249
               L++GG+DQ  N++ G  L +         LT PLL    G  KM K+    I + +
Sbjct: 199 ----LELGGTDQKFNLLMGRHLQQEYGQEPQCILTMPLLVGLDGVDKMSKSKGNYIGITE 254

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEIT 307
           +  +    +    +I D  +  +   L+   ++EI   R     G+   +AK ++A EIT
Sbjct: 255 DANT---MFAKVLSISDDLMWDWYTLLSFKSLAEIAALRQEVEGGRNPKDAKVMLAREIT 311

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
           T  H    A+ A                +P +S+        +G+  L+ +A  A ST+E
Sbjct: 312 TRFHSAAAADAAEADFANR-SKGGVPDEIPEVSLE----GAPLGIGALLKQANLAPSTSE 366

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           A R +    +++  S++S+  L+++       G   +  GK+      L
Sbjct: 367 ANRLIDGGGVRVEGSVVSDRGLKLEA------GTYVVQVGKRKFARVTL 409


>gi|284050939|ref|ZP_06381149.1| tyrosyl-tRNA synthetase [Arthrospira platensis str. Paraca]
          Length = 415

 Score =  374 bits (960), Expect = e-101,   Method: Composition-based stats.
 Identities = 102/417 (24%), Positives = 179/417 (42%), Gaps = 26/417 (6%)

Query: 2   PAFKSDFLSILSERGFIHQISNPREL--DILCSQGVVTAYIGYDLTASSLHAGHLTQLML 59
           P  +     I  E    +  +    L   +  S G +   +G D T S +H GH      
Sbjct: 20  PRLRRGVTDIFPE--LANSDNPEENLGRRLALSSGPLRIKLGIDPTGSDIHLGHSIIFRK 77

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG 119
           L   Q  GH  + ++G  T+ IGDP+ + E RR +  +++++N +         + + T 
Sbjct: 78  LRAFQDAGHTAVLIIGDFTARIGDPTGKSEVRRQLTPEQVEKNAQTYLDQLRPILDFDTP 137

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
                +  N  WL  +     L ++ S  +V +ML+ E    R ++E  +   EF Y ++
Sbjct: 138 -GRLEIRRNSEWLSKLDLAKTL-DLLSRMTVGQMLAKEGFSLRFEQENPIYLHEFLYPLM 195

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMG 238
           Q YD V +  +    +++GG+DQ  N+  G DL         F L  P+L    G  KM 
Sbjct: 196 QGYDSVAVQAD----VELGGTDQKFNLAVGRDLQRYFGQTPQFGLLMPILIGTDGVQKMS 251

Query: 239 KTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEA 298
           K+L   + L+++  +    +     I D+ +  + + LT  P++E+            + 
Sbjct: 252 KSLGNYVGLSEDALT---MYSKLEKIPDSLIEQYFELLTDYPLAELPE-------NPRDR 301

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSI-HSQHMPTISISKDEVSRGMGLLTLIV 357
           +K++A +I T  HG   A  A  AA+         ++ +P  S+S  EV     L  ++ 
Sbjct: 302 QKLLALDIVTQYHGEAAALAAQNAALNLVQGDATRAEAVPEFSLS--EVEFPAKLFYILS 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +G   S +EARR +   A+KI+   I ++ L +   +        L  GKK  I  
Sbjct: 360 ASGLCKSGSEARRQIAGGAVKIDGDRIEDDNLVVASAEEVKGR--VLQVGKKKFIRL 414


>gi|94984115|ref|YP_603479.1| tyrosyl-tRNA synthetase [Deinococcus geothermalis DSM 11300]
 gi|94554396|gb|ABF44310.1| tyrosyl-tRNA synthetase [Deinococcus geothermalis DSM 11300]
          Length = 413

 Score =  373 bits (959), Expect = e-101,   Method: Composition-based stats.
 Identities = 98/411 (23%), Positives = 174/411 (42%), Gaps = 18/411 (4%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L+IL  RG +  ++       L     +   +G D T   LH GH   L  +   Q  GH
Sbjct: 16  LAILR-RGVVDLVTEDDLRRKLERGQPLRIKLGADPTRPDLHLGHAVILRKMRQFQDLGH 74

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           K I L+G  T++IGDPS + ++R  +  +E + N +         ++         +  N
Sbjct: 75  KVIMLIGDFTAMIGDPSGKSKTRPPLTLEETRANAQSYLEQCRLILR--DEPELLELRFN 132

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL  + Y D++R + S ++V R+L  +    RL     +S  E  Y + Q YD V L 
Sbjct: 133 SEWLEPLGYADVIR-LASRYTVARILERDDFTKRLSAGTPISLHELLYPLTQGYDSVALH 191

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWL 247
            +    +++GG+DQ  N + G  L           +T PLL    GT KM K+L   I L
Sbjct: 192 SD----VELGGTDQLFNNLVGRALQRDYGQEPQVVMTLPLLVGLDGTEKMSKSLDNYIGL 247

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
             E   P   +     + D  + ++   LT LP   I     L       A + +A ++ 
Sbjct: 248 TDE---PDVMFAGLMKVPDPLLENYFTLLTDLPPERI---QALLAGHPVAAHRELARQVV 301

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG--MGLLTLIVKAGFATST 365
             +H + + + A              +++PT++++++E+     + +  L+V AG   S 
Sbjct: 302 AWLHPQADLDAAEERFRAV-AKGGIPENVPTVTVAREELGESGRVSMARLVVLAGLEPSN 360

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             AR+ + +  +K+N    +  +  +   +    G + +  GK   +   L
Sbjct: 361 GAARKLIGNRGLKLNGKPYTEPQGTLSQDELTEEGGVVIQKGKDRFVRLIL 411


>gi|329909301|ref|ZP_08275030.1| Tyrosyl-tRNA synthetase [Oxalobacteraceae bacterium IMCC9480]
 gi|327546501|gb|EGF31486.1| Tyrosyl-tRNA synthetase [Oxalobacteraceae bacterium IMCC9480]
          Length = 424

 Score =  373 bits (959), Expect = e-101,   Method: Composition-based stats.
 Identities = 98/416 (23%), Positives = 176/416 (42%), Gaps = 31/416 (7%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           K     +L E  F  +++         +   +   +G D TA  LH GH   L  +  LQ
Sbjct: 37  KRGVDELLIESEFAQKLARSE-----LTGKPLRIKLGLDPTAPDLHLGHTVVLNKMRQLQ 91

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GH  I L+G  TS+IGDPS R+ +R  +  ++I++N +      S  +     +    
Sbjct: 92  DLGHTVIFLIGDFTSMIGDPSGRNITRPALTKEQIEDNAKTYFAQASLVLDAERTE---- 147

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           +  N  W   +    ++ ++ S ++V R+L  E    R K    +S  E  Y ++Q YD 
Sbjct: 148 IRYNSEWCDPLGARGMI-QLSSKYTVARILEREDFTKRFKAGTPISVHELLYPLMQGYDS 206

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSG 243
           V L  +    L++GG+DQ  N++ G +L +         LT PLL    G  KM K+   
Sbjct: 207 VALHAD----LELGGTDQKFNLLVGRELQKDWGQEPQCILTMPLLEGLDGVEKMSKSKGN 262

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKI 301
            I + +      + +    +I D  +  + + L+   ++E+ +       G+   + K  
Sbjct: 263 YISITEPAN---SMFAKVMSISDTMMWRYYELLSARSLAELAQFKTDVEGGRNPRDIKVA 319

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGF 361
           +A EI T  H ++    A                +P + +        +G+  L+ +A  
Sbjct: 320 LAQEIVTRFHNQQAGVDALADFDNR-ARGGIPDDIPEVQLG----GAPLGIGQLLKQANL 374

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
             ST+EA R ++ N ++I+   IS++ L+++       G   L  GK+      L 
Sbjct: 375 CASTSEALRMVEQNGVRIDGVAISDKALKVEA------GTFVLQVGKRKFARVTLS 424


>gi|260222308|emb|CBA31742.1| Tyrosyl-tRNA synthetase [Curvibacter putative symbiont of Hydra
           magnipapillata]
          Length = 442

 Score =  373 bits (959), Expect = e-101,   Method: Composition-based stats.
 Identities = 98/410 (23%), Positives = 172/410 (41%), Gaps = 26/410 (6%)

Query: 15  RGFIHQISNPRELDILCSQG----VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           RG    +     +  L         +   +G D TA  +H GH   L  +  LQ  GH  
Sbjct: 52  RGVEELLPQDEWVKKLAKSEATGKPLRIKLGLDPTAPDIHIGHTVVLNKMRQLQDLGHTV 111

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           I L+G  TS+IGDPS R+ +R  + +++I+ N E      S  +     +    +  N  
Sbjct: 112 IFLIGDFTSMIGDPSGRNSTRPPLTAEQIKVNAETYYRQASLVLDPAKTE----IRYNSE 167

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           W   +    ++ ++ S ++V RM+       R K    ++  EF Y ++Q YD V L  +
Sbjct: 168 WSDPLGARGMI-QLASRYTVARMMERNDFHDRFKAGTPIAVHEFLYPLMQGYDSVALESD 226

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNK 249
               L++GG+DQ  N++ G  L           LT PLL    G  KM K+ +  I +++
Sbjct: 227 ----LELGGTDQKFNLLMGRTLQAEYGQEPQCILTMPLLEGLDGVEKMSKSKNNYIGISE 282

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEIT 307
           E   P   +    +I D  +  +   L+    +EI   +     G+   +AK  +A EIT
Sbjct: 283 E---PNTMFAKVLSISDVLMWKWYTLLSFKSEAEIAALKAEVEGGRNPKDAKVALAKEIT 339

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
              H    A+ A    +           +  I++   E    +G+  L+  A  A S+ E
Sbjct: 340 ARFHSAAAADAAEQDFINR-SKGGIPDQIDEITLPLGEGGAAVGIAALLKSANLAASSGE 398

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
             R +    ++++++++S++ L++        G   L  GK+      L 
Sbjct: 399 GNRLIDGGGVRVDSNVVSDKGLKL------GAGTYVLQVGKRKFARVTLA 442


>gi|121603419|ref|YP_980748.1| tyrosyl-tRNA synthetase [Polaromonas naphthalenivorans CJ2]
 gi|120592388|gb|ABM35827.1| tyrosyl-tRNA synthetase [Polaromonas naphthalenivorans CJ2]
          Length = 410

 Score =  373 bits (959), Expect = e-101,   Method: Composition-based stats.
 Identities = 102/410 (24%), Positives = 176/410 (42%), Gaps = 30/410 (7%)

Query: 15  RGFIHQISNPRELDILCSQG----VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           RG    I        L         +   +G D TA  +H GH   L  +  LQ  GH  
Sbjct: 24  RGCDELIPQDEWTRKLVRSEATGVPLRIKLGLDPTAPDIHIGHTVVLNKMRQLQDLGHTV 83

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           I L+G  TS+IGDPS R+ +R  +  ++I+ N E      S  +     +    +  N  
Sbjct: 84  IFLIGDFTSLIGDPSGRNSTRPPLTPEQIKVNAETYYRQASLVLDPAKTE----IRYNSE 139

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           W   +    ++ ++ S ++V RM+       R K  QS+S  EF Y ++Q YD V L  +
Sbjct: 140 WCDPLGARGMI-QLASRYTVARMMERNDFHDRFKAGQSISVHEFLYPLMQGYDSVALKSD 198

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNK 249
               L++GG+DQ  N++ G  L +         LT PLL    G  KM K+ +  I +++
Sbjct: 199 ----LELGGTDQKFNLLMGRHLQQEYGQEPQCILTMPLLEGLDGIEKMSKSKNNYIGISE 254

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEIT 307
           +     + +    +I D  +  +   L+    ++I   +     G+   +AK  +A EIT
Sbjct: 255 DAN---SMFAKVLSISDVLMWKWYTLLSFKSEADIAALKAEIEAGRNPKDAKVALAKEIT 311

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
              H    A+ A    +           +P +S+S       +G+  L+  AG A S +E
Sbjct: 312 ARFHSAAAADAAEQDFINR-SKGGVPDEIPDVSLS----GAPLGIGALLKAAGLAPSGSE 366

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           A R +    +++++S++S++ L++        G   +  GK+      L 
Sbjct: 367 ASRLIDGGGVRVDSSVVSDKALKLAA------GTYVVQVGKRKFARVTLA 410


>gi|269115037|ref|YP_003302800.1| Tyrosyl-tRNA synthetase [Mycoplasma hominis]
 gi|268322662|emb|CAX37397.1| Tyrosyl-tRNA synthetase [Mycoplasma hominis ATCC 23114]
          Length = 411

 Score =  373 bits (959), Expect = e-101,   Method: Composition-based stats.
 Identities = 130/422 (30%), Positives = 214/422 (50%), Gaps = 23/422 (5%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
            + + L  L  RG ++ IS+  + + +        Y G+D TA SLH G+  Q++ L   
Sbjct: 1   MQKNILDDLKSRGVLNNISSEEKFNNISLG--TGVYTGFDPTAKSLHLGNYLQILSLLRF 58

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           +K G+KPI+++GG T +IGDPSFR+  R+ +  + + +N   IK     F          
Sbjct: 59  KKAGYKPIAILGGITGMIGDPSFRNSERKFLDQETLLQNKNAIKNQLQKF--------GL 110

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            +++N  +      +D LR IG   +VN +L  +S+ +RL     L+F EF+Y +LQ +D
Sbjct: 111 EVIDNLDFYKHWTVVDFLRNIGKLINVNYLLEKDSITTRLAN--GLTFTEFSYTLLQGWD 168

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKT- 240
           F  L +N++ ++QMGGSDQWGNI  G+++  +L        A+T  LL   +G K GK+ 
Sbjct: 169 FKCLYENHNVKIQMGGSDQWGNITTGLEIIRKLHGESADAVAMTFNLLVDENGKKFGKST 228

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE--INEA 298
             G++WL+  MTSPY+ +Q+  N  D  +  + K LT L + EI+++     +      A
Sbjct: 229 GGGSLWLDPNMTSPYSIYQFLLNQSDVKIEEYLKWLTFLEVEEINKIMTQHNENKTKRIA 288

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS-----ISKDEVSRGMGLL 353
           +K +A E+   +HG + A K    +   F+ S    ++  IS     +   EV  G   +
Sbjct: 289 QKKLAFELVKDIHGVDIANKCIRISEILFNKSNEELNIEDISMLLGYLPCIEVKEGEKFI 348

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            ++      +S  EAR  +  N   I+N+II++E   I    F +     L  GKK+  I
Sbjct: 349 EILKNNQIVSSNREAREFISKNTFLIDNNIINDENYSITFNKF-NGQYALLKKGKKDFYI 407

Query: 414 CH 415
             
Sbjct: 408 LK 409


>gi|308234417|ref|ZP_07665154.1| tyrosyl-tRNA synthetase [Atopobium vaginae DSM 15829]
          Length = 404

 Score =  373 bits (959), Expect = e-101,   Method: Composition-based stats.
 Identities = 111/397 (27%), Positives = 176/397 (44%), Gaps = 21/397 (5%)

Query: 20  QISNPRELDILCS-QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGT 78
           QI    EL    S Q  +T  +G D T+  LH GH   L  +   Q  GH  + ++G GT
Sbjct: 16  QIVPVDELKAKLSRQEPLTVKLGVDPTSPDLHLGHAVPLRKMRQFQDLGHNVVLIIGNGT 75

Query: 79  SIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYI 138
           ++IGDPS RD +R  +  + +++N           +     K    +++N  WL  +   
Sbjct: 76  ALIGDPSGRDSTRPPLTEEAVEKNAATYVEQAMKILDPQKTK----IVHNGEWLKPLDLS 131

Query: 139 DLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMG 198
            +L  + S F+V R+L  E   +R    QS+S  EF Y +LQAYD V +  +    ++MG
Sbjct: 132 KMLG-LMSKFNVARILEREDFHNRYTNNQSISLHEFIYPVLQAYDSVVVHAD----VEMG 186

Query: 199 GSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNF 257
           G+DQ  N++ G DL          ALT PLL    GT KM K+    + L        + 
Sbjct: 187 GNDQIFNLLAGRDLMRAEGMEPQVALTMPLLVGTDGTKKMSKSYGNYVGLTDSAD---DM 243

Query: 258 WQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKIIATEITTMVHGRE 314
           +    +I D  + S+ +  +T  + EI   D   K +  +    K+ +A  I T+ HG  
Sbjct: 244 FGKLMSIPDELIASYYRLCSTFSLEEIDAVDEQFKNKTADPYALKRALAVNIVTLYHGEG 303

Query: 315 EAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG--MGLLTLIVKAGFATSTNEARRHL 372
               A       F        +P  S S  +VS    + L  L+V    A +++EARR +
Sbjct: 304 AGLAAQNQFDAQFKHHEVPDDIPEFSTSLIDVSDDGMVYLAKLMVDCKLAPTSSEARRRI 363

Query: 373 KSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
               +KI+   ++ +   I  +   +     L FGK+
Sbjct: 364 DGGGVKIDGKAVAPKSYNISHERLHAG--TVLQFGKR 398


>gi|258544577|ref|ZP_05704811.1| tyrosine--tRNA ligase [Cardiobacterium hominis ATCC 15826]
 gi|258520208|gb|EEV89067.1| tyrosine--tRNA ligase [Cardiobacterium hominis ATCC 15826]
          Length = 418

 Score =  373 bits (959), Expect = e-101,   Method: Composition-based stats.
 Identities = 90/409 (22%), Positives = 170/409 (41%), Gaps = 22/409 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG +  I        L +   +   +G D TA  LH GH   L  L   Q  GH+ +
Sbjct: 29  LFRRGAVDFIGEEELRAKLAAGKKLRVKLGMDPTAPDLHFGHTVVLNKLRQFQDAGHQVL 88

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T++IGDPS +  +R  +  +++  N E  K      +     +    ++ N  W
Sbjct: 89  FLIGDFTALIGDPSGKSATRPPLSPEQVLANAETYKEQVFKILDPAKTE----VMFNSHW 144

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +  +   D++R + + ++V R+L  +  + R    + ++  EF Y + Q YD V +    
Sbjct: 145 MGPMSSTDMIR-LAAKYTVARILERDDFQKRYTEGRPIALHEFLYPLTQGYDSVAM---- 199

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKE 250
           +  +++GG+DQ  N++ G DL           +T P+L    G  KM K+L   I +   
Sbjct: 200 EADVELGGTDQKFNLLVGRDLQREYGQSPQAIITMPILEGLDGVQKMSKSLGNYIGI--- 256

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIATEITT 308
                  +    +I D  +  +   L+   M EI  +      G+   + K  +A E+  
Sbjct: 257 FDPANEMFGKIMSISDELMWRWFTLLSFRSMDEIAALQAEVTAGRNPRDVKFELARELVA 316

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
             H    A  A  A +  F  +   + +    I   + + G  +  ++  AG   ST+E 
Sbjct: 317 RFHDEAAAAAAQEAFVNRFAKNEIPEDLEEFRIDAPDGALG--IAHVLKAAGLVGSTSEG 374

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            R +   A+K++   +++   +++        +  +  GK+  +   L 
Sbjct: 375 LRMVDGGAVKVDGERVASRDFKLE-----RGFSGIVQAGKRRIVKVVLV 418


>gi|226948471|ref|YP_002803562.1| tyrosine--tRNA ligase [Clostridium botulinum A2 str. Kyoto]
 gi|226843127|gb|ACO85793.1| tyrosine--tRNA ligase [Clostridium botulinum A2 str. Kyoto]
          Length = 400

 Score =  373 bits (959), Expect = e-101,   Method: Composition-based stats.
 Identities = 109/406 (26%), Positives = 184/406 (45%), Gaps = 33/406 (8%)

Query: 18  IHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPIS 72
           + +I N  +L     +       +T  +G D TA  +H GH   L  +  LQ  GH+ + 
Sbjct: 15  VDEIINVEDLKNKLERSQKTGKPLTVKLGLDPTAPDIHIGHSVVLRKIRQLQDLGHRAVI 74

Query: 73  LMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL 132
           ++G  T  IGDP+ + ++R+ +  +E+  N +  +      I             N  WL
Sbjct: 75  IIGDFTGRIGDPTGKSKTRKPLTQEEVMFNAKTYEEQIFKIIDKDKTDLK----FNSEWL 130

Query: 133 CSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYD 192
             +   D + E+ S ++V RML  E  + R +   S+   EF Y +LQA+D V L  +  
Sbjct: 131 GKLSLRDTI-ELTSKYTVARMLEREDFKKRFESHSSIGIHEFFYPLLQAFDSVSLNAD-- 187

Query: 193 CRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEM 251
             +++GG+DQ  N++ G  + +        A+  PLL    G  KM K+L   I +N++ 
Sbjct: 188 --IELGGTDQRFNLLMGRTIQKDFDQESQVAILMPLLEGTDGKDKMSKSLGNYIGINEDA 245

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKIIATEITT 308
               + +    +I D  +V   +  T +   E+ ++    + +     + K  +A EI  
Sbjct: 246 N---DIYGKVMSIPDGMIVKHYELATDIHPDEVAKIKTRLEEENVNPRDIKMELAKEIVR 302

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
           + HG E + KA       F      + + TI ++  E      ++ LIVKA FA S NEA
Sbjct: 303 LYHGEEASVKAEVNFKNIFQQGNIPEDIDTIKVNLTE----TNIVDLIVKAKFAPSKNEA 358

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           RR +K  A+KIN   + +E+ ++K +D        L  GKK  I  
Sbjct: 359 RRLVKQGAVKINGEKV-DEECKVKNED-------ILQVGKKKFIKI 396


>gi|291568848|dbj|BAI91120.1| tyrosyl-tRNA synthetase [Arthrospira platensis NIES-39]
          Length = 415

 Score =  373 bits (958), Expect = e-101,   Method: Composition-based stats.
 Identities = 101/417 (24%), Positives = 179/417 (42%), Gaps = 26/417 (6%)

Query: 2   PAFKSDFLSILSERGFIHQISNPREL--DILCSQGVVTAYIGYDLTASSLHAGHLTQLML 59
           P  +     I  E    +  +    L   +  S G +   +G D T S +H GH      
Sbjct: 20  PRLRRGVTDIFPE--LANSDNPEENLGRRLALSSGPLRIKLGIDPTGSDIHLGHSIIFRK 77

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG 119
           L   Q  GH  + ++G  T+ IGDP+ + E RR +  +++++N +         + + T 
Sbjct: 78  LRAFQDAGHTAVLIIGDFTARIGDPTGKSEVRRQLTPEQVEKNAQTYLDQLRPILDFDTP 137

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
                +  N  WL  +     L ++ S  +V +ML+ E    R ++E  +   EF Y ++
Sbjct: 138 -GRLEIRRNSEWLSKLDLAKTL-DLLSRMTVGQMLAKEGFSLRFEQENPIYLHEFLYPLM 195

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMG 238
           Q YD V +  +    +++GG+DQ  N+  G DL         F L  P+L    G  KM 
Sbjct: 196 QGYDSVAVQAD----VELGGTDQKFNLAVGRDLQRYFGQTPQFGLLMPILIGTDGVQKMS 251

Query: 239 KTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEA 298
           K+L   + L+++  +    +     + D+ +  + + LT  P++E+            + 
Sbjct: 252 KSLGNYVGLSEDALT---MYSKLEKVPDSLIEQYFELLTDYPLAELPE-------NPRDR 301

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSI-HSQHMPTISISKDEVSRGMGLLTLIV 357
           +K++A +I T  HG   A  A  AA+         ++ +P  S+S  EV     L  ++ 
Sbjct: 302 QKLLALDIVTQYHGEAAALAAQNAALNLVQGDATRAEAVPEFSLS--EVEFPAKLFYILS 359

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +G   S +EARR +   A+KI+   I ++ L +   +        L  GKK  I  
Sbjct: 360 ASGLCKSGSEARRQIAGGAVKIDGDRIEDDNLVVASAEEVKGR--VLQVGKKKFIRL 414


>gi|118594131|ref|ZP_01551478.1| tyrosyl-tRNA synthetase [Methylophilales bacterium HTCC2181]
 gi|118439909|gb|EAV46536.1| tyrosyl-tRNA synthetase [Methylophilales bacterium HTCC2181]
          Length = 397

 Score =  373 bits (958), Expect = e-101,   Method: Composition-based stats.
 Identities = 98/401 (24%), Positives = 169/401 (42%), Gaps = 23/401 (5%)

Query: 15  RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLM 74
           RG    +     ++ L     +    G+D TA  LH GH   L  L  LQ  GH  + L+
Sbjct: 12  RGTDEILVEAELIEKLKENRPLRIKAGFDPTAPDLHLGHTVLLNKLRQLQDLGHHVMFLI 71

Query: 75  GGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCS 134
           G  T +IGDP+ ++ +R  +  +E+ EN +  +      +     K    ++ N  WL  
Sbjct: 72  GDFTGMIGDPTGKNTTRPPLTKEEVSENAQSYEKQVFKILD----KNKTEVVFNSKWLEP 127

Query: 135 IKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCR 194
           +    +L  + +  +V RML  +    R K  Q ++  EF Y +LQ YD V L  +    
Sbjct: 128 LGAAGML-TLSARHTVARMLERDDFSKRFKSNQPIAIHEFMYPLLQGYDSVALKAD---- 182

Query: 195 LQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTS 253
           +++GG+DQ  N++ G +L ++        +T PLL    G  KM K+L+  I +++    
Sbjct: 183 IELGGTDQKFNLLMGRELQKQYDQTPQCIITMPLLEGLDGVNKMSKSLNNYIGVDEPA-- 240

Query: 254 PYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIATEITTMVH 311
               +    +I D  +  + + L+   ++EID   K    G+     K   A EI    H
Sbjct: 241 -ETIFAKILSISDDLMWRYIELLSLKKIAEIDVWRKRFDLGENPKNIKVEFAKEIVARFH 299

Query: 312 GREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRH 371
           G + A+ A                +P I I     +  + +  L+    F  ST+EA R 
Sbjct: 300 GEKLADSAEQDF-NLRAQGKIPDDIPEIKIQYP--NNKVTVPQLLKHIQFVGSTSEAMRL 356

Query: 372 LKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           +K   +K++   I +    I+     +     +  GK+   
Sbjct: 357 IKGGGVKVDGEKIVDPHYLIE-----NMTTFTIQVGKRKFA 392


>gi|328944262|ref|ZP_08241726.1| tyrosine--tRNA ligase [Atopobium vaginae DSM 15829]
 gi|327491181|gb|EGF22956.1| tyrosine--tRNA ligase [Atopobium vaginae DSM 15829]
          Length = 410

 Score =  373 bits (958), Expect = e-101,   Method: Composition-based stats.
 Identities = 111/397 (27%), Positives = 176/397 (44%), Gaps = 21/397 (5%)

Query: 20  QISNPRELDILCS-QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGT 78
           QI    EL    S Q  +T  +G D T+  LH GH   L  +   Q  GH  + ++G GT
Sbjct: 22  QIVPVDELKAKLSRQEPLTVKLGVDPTSPDLHLGHAVPLRKMRQFQDLGHNVVLIIGNGT 81

Query: 79  SIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYI 138
           ++IGDPS RD +R  +  + +++N           +     K    +++N  WL  +   
Sbjct: 82  ALIGDPSGRDSTRPPLTEEAVEKNAATYVEQAMKILDPQKTK----IVHNGEWLKPLDLS 137

Query: 139 DLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMG 198
            +L  + S F+V R+L  E   +R    QS+S  EF Y +LQAYD V +  +    ++MG
Sbjct: 138 KMLG-LMSKFNVARILEREDFHNRYTNNQSISLHEFIYPVLQAYDSVVVHAD----VEMG 192

Query: 199 GSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNF 257
           G+DQ  N++ G DL          ALT PLL    GT KM K+    + L        + 
Sbjct: 193 GNDQIFNLLAGRDLMRAEGMEPQVALTMPLLVGTDGTKKMSKSYGNYVGLTDSAD---DM 249

Query: 258 WQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKIIATEITTMVHGRE 314
           +    +I D  + S+ +  +T  + EI   D   K +  +    K+ +A  I T+ HG  
Sbjct: 250 FGKLMSIPDELIASYYRLCSTFSLEEIDAVDEQFKNKTADPYALKRALAVNIVTLYHGEG 309

Query: 315 EAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG--MGLLTLIVKAGFATSTNEARRHL 372
               A       F        +P  S S  +VS    + L  L+V    A +++EARR +
Sbjct: 310 AGLAAQNQFDAQFKHHEVPDDIPEFSTSLIDVSDDGMVYLAKLMVDCKLAPTSSEARRRI 369

Query: 373 KSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
               +KI+   ++ +   I  +   +     L FGK+
Sbjct: 370 DGGGVKIDGKAVAPKSYNISHERLHAG--TVLQFGKR 404


>gi|297170337|gb|ADI21372.1| tyrosyl-tRNA synthetase [uncultured gamma proteobacterium
           HF0010_20H22]
          Length = 407

 Score =  373 bits (958), Expect = e-101,   Method: Composition-based stats.
 Identities = 104/401 (25%), Positives = 184/401 (45%), Gaps = 25/401 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGV-VTAYIGYDLTASSLHAGHLTQLML 59
           M    S+ L IL  RG + +I     L+   ++   +    G+D TA  LH GH   +  
Sbjct: 1   MSLSTSEKLEILK-RG-VEEIIPENGLEKKLTKNKTLIIKAGFDPTAPDLHLGHTVLINK 58

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG 119
           L   Q  GHK + L+G  T +IGDPS   E+R ++  +++++N +  +      +     
Sbjct: 59  LKQFQDLGHKVVFLIGDFTGMIGDPSGVSETRPILTVEQLKKNSKTYQEQIFKILD---- 114

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
           K    +  N +W   +   +L+  + S  +V RML  +    R K  + +S  EF Y ++
Sbjct: 115 KKKTKIEFNSSWFKRMTSAELI-NLSSKMTVARMLERDDFSKRYKGNKPISIHEFIYPLV 173

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMG 238
           Q YD  EL  +    +++GG+DQ  N++ G D+ +     +   +T P+L    G  KM 
Sbjct: 174 QGYDSFELKAD----VELGGTDQKFNLLVGRDIQKSFGMEEQIIMTLPILEGTDGVKKMS 229

Query: 239 KTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEIN 296
           K+L   I L +    P + +    +I D  +  +   L+     EI  + K   +G    
Sbjct: 230 KSLKNYIGLQEN---PNDMFGKIMSISDELMWRYFDLLSFKTSEEIKEIKKKTERGLNPM 286

Query: 297 EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLI 356
           EAKK++++EI T  HG E+A  A       F        +  I +S    +  + ++ L+
Sbjct: 287 EAKKMLSSEIVTRFHGEEKAMLAEKEFTNRFSKGKDPAEIKLIKLSMK--ASSISIIDLL 344

Query: 357 V--KAG---FATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
              + G      S +EA+R L   A+KI+ + +++E   ++
Sbjct: 345 SSEELGDKRLCKSKSEAKRMLSQGAVKIDGNKVTDETFLVQ 385


>gi|297182357|gb|ADI18524.1| tyrosyl-tRNA synthetase [uncultured gamma proteobacterium
           HF4000_19M20]
          Length = 398

 Score =  373 bits (958), Expect = e-101,   Method: Composition-based stats.
 Identities = 107/410 (26%), Positives = 182/410 (44%), Gaps = 24/410 (5%)

Query: 11  ILSERGFIHQISNPRELDILCS-QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
            L  RG + +I   +E       +  +   +G+D TA  LH GH   L  L   Q  GH+
Sbjct: 7   ELLLRG-VEEIVPEKEFHEKLKKEKPLRIKLGFDPTAPDLHLGHSVILNKLKLFQDFGHE 65

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
            I L+G  T ++GDPS  +E+R ++  +EI+ N +  +      +     +    +  N 
Sbjct: 66  VIFLIGDFTGLVGDPSGVNETRPVLSEEEIKINAKTYERQVFKILD----RKKTEVRFNS 121

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
            W+ +    + +R + S  +V RML  +    R K +Q +S  EF Y +LQ YD   L  
Sbjct: 122 EWMKNFTPQEFVR-LSSIQTVARMLERDDFDKRYKSQQPISIHEFLYPLLQGYDSFVLKA 180

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLN 248
           +    +++GG+DQ  N++ G ++ +    P    +T PLL    G  KM ++L   I L 
Sbjct: 181 D----VELGGTDQKFNLLLGREVQKFYGLPPQSIMTLPLLEGVDGVMKMSQSLGNYIALE 236

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEI 306
               S  + +    +I D  +  +   L+     EI   + A+ +G+     K ++A EI
Sbjct: 237 ---DSSKDMFGKIMSISDKLMWRYYDLLSFKTEKEIKSLKKAQKEGENPRNLKFLLAEEI 293

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
               HG  E  KA       F       ++  ISI+ +     + L  ++ +AG A ST+
Sbjct: 294 VDRFHGEGEGSKAKKEFTSVFQQGKLPSNIKEISINIE--GSTLTLPKVLKEAGMAISTS 351

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           EA R +K  A+KI    I++ K  + L        +    GK+  +   +
Sbjct: 352 EALRLIKQGAVKIEGQKITDPKHNLSL-----NSCLLYQVGKRKFLKITI 396


>gi|307178905|gb|EFN67433.1| Probable tyrosyl-tRNA synthetase, mitochondrial [Camponotus
           floridanus]
          Length = 426

 Score =  372 bits (957), Expect = e-101,   Method: Composition-based stats.
 Identities = 129/416 (31%), Positives = 210/416 (50%), Gaps = 22/416 (5%)

Query: 22  SNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSII 81
           +N  ++  L ++     Y G+D TA SLH G+L  LM L   Q+ GH+ I+L+GG T +I
Sbjct: 9   TNTNKIIDLLNKSPQCVYAGFDPTADSLHIGNLLILMNLLHWQRAGHQVIALVGGATGLI 68

Query: 82  GDPSFRDESR----RMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL-----MLNNETWL 132
           GDPS R + R    + +  + ++  I  I+ IF++   Y             ++NN  W 
Sbjct: 69  GDPSHRKKERVEMDKYLMEENLKSIINNIEIIFNNHQTYFWKNRQEHLKPLIIVNNLDWY 128

Query: 133 CSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYD 192
            ++  I+ +R IG +F +  ML   SV+SRL  +  +SF EF Y + QAYD+ +L K Y 
Sbjct: 129 TNVNVIEFVRSIGKYFRMGTMLGRASVQSRLNSDTGMSFTEFTYQVFQAYDWFQLMKKYK 188

Query: 193 CRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMT 252
           CR Q+GGSDQ GNI+ G DL  + +  +++ +T PL+T   G K GK+L  A+WL+   +
Sbjct: 189 CRFQIGGSDQMGNIMSGYDLITKTEKQEVYGITLPLITAEGGKKFGKSLLNAVWLSSTKS 248

Query: 253 SPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINEAKKIIATEITTMV 310
           S +  +QY+    D+DV  F K  T +P+++I  +     K  E   A+KI+A ++T +V
Sbjct: 249 SSFQLYQYFIRTKDSDVEKFLKLFTFIPLNKITEIMNDHMKSSEDRRAQKILAEQVTLLV 308

Query: 311 HGREEAEKAATAAMECFDMSI----------HSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           HG +    A  A+   +D SI           +      +I       G+ +  L  KA 
Sbjct: 309 HGEDGLLAAKRASAALYDKSIESFTRMNALELADVFEDATIVDILSEPGLTIYDLARKAK 368

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ-DFDSTGNIKLSFGKKNHIICH 415
              + ++A+R + +    +N+  I+N    +       S     +  GKK + I  
Sbjct: 369 CFKTDHDAQRIITAGGFYVNHQKITNLNEVVVPGIHILSNNLSLVRVGKKTYHIIR 424


>gi|124268334|ref|YP_001022338.1| tyrosyl-tRNA synthetase [Methylibium petroleiphilum PM1]
 gi|124261109|gb|ABM96103.1| tyrosyl-tRNA synthetase [Methylibium petroleiphilum PM1]
          Length = 424

 Score =  372 bits (957), Expect = e-101,   Method: Composition-based stats.
 Identities = 99/409 (24%), Positives = 176/409 (43%), Gaps = 30/409 (7%)

Query: 15  RGFIHQISNPRELDILCSQG----VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           RG    +     L  L         +   +G D TA  +H GH   L  +  LQ  GH+ 
Sbjct: 38  RGCDELLPQDDWLQKLARSNATGVPLRIKLGLDPTAPDIHLGHTVVLNKMRQLQDLGHQV 97

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           I L+G  TS+IGDPS R+ +R  +  ++I+ N +      S  +     +    +  N  
Sbjct: 98  IFLIGDFTSMIGDPSGRNATRPPLTREQIESNAQTYYRQASLVLDPSKTE----IRYNSE 153

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           W   +    ++ ++ S +++ RM+  +    R K    +S  EF Y ++Q YD V L  +
Sbjct: 154 WSDPLGARGMI-QLASRYTIARMMERDDFTKRFKAGVPISVHEFLYPLMQGYDSVALKSD 212

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNK 249
               L++GG+DQ  N++ G  L           LT PLL    G  KM K+ +  I + +
Sbjct: 213 ----LELGGTDQKFNLLVGRQLQAEYGQEPQCILTMPLLEGLDGVEKMSKSKNNYIGITE 268

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIATEIT 307
                 + +    +I DA +  +   L+    +EI  +      G+   +AK ++A E+T
Sbjct: 269 PAN---SMFAKMLSISDALMWKYFTLLSFRSEAEIAALKAEVDAGRNPKDAKVLLAKEVT 325

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
           T  H    AE A           +    +P ++++       +G+ TL+ +A   TS +E
Sbjct: 326 TRFHDAAAAEAAEADFQNRAKGGV-PDELPDVALA----GAPLGIGTLLKQANLVTSGSE 380

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             R ++   ++I+   IS++ L+++       G   +  GK+      L
Sbjct: 381 GLRMVEQGGVRIDGVAISDKGLKLEA------GTYVVQVGKRKFARVTL 423


>gi|15836774|ref|NP_297462.1| tyrosyl-tRNA synthetase [Xylella fastidiosa 9a5c]
 gi|81548372|sp|Q9PGX7|SYY_XYLFA RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|9104963|gb|AAF82982.1|AE003870_8 tyrosyl-tRNA synthetase [Xylella fastidiosa 9a5c]
          Length = 418

 Score =  372 bits (957), Expect = e-101,   Method: Composition-based stats.
 Identities = 100/411 (24%), Positives = 175/411 (42%), Gaps = 24/411 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L ERG    +        L S   +    G+D TA  LH GH   L  +   Q+ GH+ I
Sbjct: 10  LIERGANEILKFDELERRLRSGRPLRIKAGFDPTAPDLHLGHTVLLNKMRQFQELGHQVI 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T +IGDP+ ++ +R+ +  +++  N    +      +     +T   +  N  W
Sbjct: 70  FLIGDFTGMIGDPTGKNVTRKPLSHEDVLANARTYEDQVFKVLD----RTLTEVRFNSEW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
              +  +D+++      +V RML  +    R   +Q +   EF Y ++Q YD + L  + 
Sbjct: 126 FGKMSAVDMIKLAAQH-TVARMLERDDFAKRFVSQQPIVIHEFLYPLIQGYDSIALRAD- 183

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G  L E    P    LT PLL    G  KM K+L   I +   
Sbjct: 184 ---VELGGTDQKFNLLMGRALQEHHGQPPQVVLTMPLLEGLDGVAKMSKSLGNYIGI--- 237

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTT-LPMSEIDRMAKLQGK---EINEAKKIIATEI 306
              P +       I D  +  + + L+  +  +E+  + +   K      E K  +A E+
Sbjct: 238 KEPPIDIVTKTMKIGDDLMWRWIELLSFKISAAEVVALREAVAKSELNPREVKLRLAHEL 297

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
            +  +    AEKA            ++  +P   I+    + G+ L+ L+ K+G A S +
Sbjct: 298 VSRFYDNAAAEKAIAGWQAVVTGQGNNNLLPLQKINVP--ADGVRLVALLTKSGLAPSNS 355

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           EA R LK  A++++  ++ +  L      F       +  GK+N     L 
Sbjct: 356 EAMRKLKERAVRVDGIVVDDAHL-----HFVPGFEGLIQIGKRNFAKVRLV 401


>gi|303232935|ref|ZP_07319616.1| tyrosine--tRNA ligase [Atopobium vaginae PB189-T1-4]
 gi|302480933|gb|EFL44012.1| tyrosine--tRNA ligase [Atopobium vaginae PB189-T1-4]
          Length = 451

 Score =  372 bits (957), Expect = e-101,   Method: Composition-based stats.
 Identities = 114/402 (28%), Positives = 179/402 (44%), Gaps = 21/402 (5%)

Query: 20  QISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGT 78
           QI    EL     +G  +T  +G D T+  LH GH   L  +   Q  GH+ + ++G GT
Sbjct: 63  QIVPIDELKAKLEKGKPLTIKLGVDPTSPDLHLGHAVPLRKMRQFQDLGHRVVLIIGNGT 122

Query: 79  SIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYI 138
           ++IGDPS RD +R  +  ++++ N +         +          +++N  WL  +   
Sbjct: 123 ALIGDPSGRDSTRPPLTEEQVETNAQTYVAQAMKILD----PEKTSIVHNGDWLKPLDLA 178

Query: 139 DLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMG 198
            +L  I S F+V R+L  E    R   EQS+S  EF Y +LQAYD V ++ +    L+MG
Sbjct: 179 HML-SIMSKFNVARILEREDFHKRYTNEQSISLHEFIYPVLQAYDSVVVSAD----LEMG 233

Query: 199 GSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNF 257
           G+DQ  N++ G DL          ALT PLL    G  KM K+    + L  E   P + 
Sbjct: 234 GNDQIFNLLAGRDLMRAEGMEPQVALTMPLLVGIDGSKKMSKSYGNYVGLTDE---PNDM 290

Query: 258 WQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL---QGKEINEAKKIIATEITTMVHGRE 314
           +    +I D  + S+ +  +T  + EID + +          E K+ +A  I  + HG  
Sbjct: 291 FGKLMSIPDELIASYYRLCSTFSIDEIDAVDQQFKDNTANPYELKRKLAVNIVDLYHGAG 350

Query: 315 EAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG--MGLLTLIVKAGFATSTNEARRHL 372
               A  A    F      + +P  S+S  + +    + L  L+V    A ST EARR +
Sbjct: 351 AGAAAQDAFDATFKHGDIPEDIPEFSLSCVQENDEHMVYLAKLLVDVKLAPSTGEARRRI 410

Query: 373 KSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
               +KIN   +  +   +    F S     + FGK++    
Sbjct: 411 DGGGVKINGVAVKPKCYNLPADTFTSG--CVMQFGKRSWARL 450


>gi|319941829|ref|ZP_08016151.1| tyrosyl-tRNA synthetase [Sutterella wadsworthensis 3_1_45B]
 gi|319804762|gb|EFW01629.1| tyrosyl-tRNA synthetase [Sutterella wadsworthensis 3_1_45B]
          Length = 421

 Score =  372 bits (957), Expect = e-101,   Method: Composition-based stats.
 Identities = 99/413 (23%), Positives = 177/413 (42%), Gaps = 26/413 (6%)

Query: 12  LSERG---FIHQISNPREL-DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           L  RG   F+ Q    ++L     +   +   +G D TA  +H GH   L  L  LQ  G
Sbjct: 27  LIARGTDTFLIQSEFEQKLARSKATGEPLRCKLGLDPTAPDIHIGHTVVLNKLRQLQDLG 86

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H  I L+G  T+ IGDPS R+ +R  +  ++I+ N +         +     +    +  
Sbjct: 87  HTVIFLVGDFTAAIGDPSGRNTTRPPLTREQIEANAQTYLNQAGMVLDLDKTE----VRY 142

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W  ++    L+ ++ S +++ R+L  +    R K E  ++  E  Y ++Q YD V L
Sbjct: 143 NSEWSNALGATGLI-QLASRYTLARLLERDDFAKRFKEELPIAMHELLYPLMQGYDSVAL 201

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIW 246
             +    L++GGSDQ  N++ G +L  +        LT PLL    G  KM K+    I 
Sbjct: 202 KAD----LELGGSDQRFNLLVGRELQRQYGQEPQCILTMPLLVGLDGVQKMSKSKKNYIG 257

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIAT 304
           +        + +    +I D  + ++   L+    +EI ++ K   +G+   +AK ++A 
Sbjct: 258 ITDPAN---DMFGKVMSITDDLMWNWYDLLSLRSNAEIAQLKKECAEGRNPRDAKVLLAR 314

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           EI    H +  A+ A       F        +  ++++       +G++ LI  AG A S
Sbjct: 315 EIIERFHDKAAADAAEAEFNARFQKGAVPNDIKDVTVAAPTGE--IGIMQLIKVAGLAPS 372

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
             EA R++    ++I+   + +  L+I+           L  GK+      + 
Sbjct: 373 NAEAGRNIDQGGVRIDGESVRDRTLKIQA-----GAEFVLQVGKRRWARVKVT 420


>gi|257126985|ref|YP_003165099.1| tyrosyl-tRNA synthetase [Leptotrichia buccalis C-1013-b]
 gi|257050924|gb|ACV40108.1| tyrosyl-tRNA synthetase [Leptotrichia buccalis C-1013-b]
          Length = 412

 Score =  372 bits (956), Expect = e-101,   Method: Composition-based stats.
 Identities = 106/411 (25%), Positives = 184/411 (44%), Gaps = 32/411 (7%)

Query: 15  RGFIHQISNPRELDILCSQG-----VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
           RG   +I N  E      +       +   +G D T S LH GH   L  L   Q  GH+
Sbjct: 24  RGC-DEIINENEFKKKLEKSISTNTPLRVKLGIDPTGSELHLGHAVPLRKLKQFQDLGHE 82

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
            + L+G  T  IGDP+ + E+R+M+  +++ ENI+         +          ++ N 
Sbjct: 83  VLFLIGTFTGRIGDPTGKSETRKMLSEEQVSENIKTYLDQVKLILDLD----KINVVYNA 138

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
            WL  +   D L  + S F+V++M+S E    RL   + +S +EF Y ILQ YD VEL  
Sbjct: 139 DWLEKLSLSDALNLL-SQFTVSQMISREDFSKRLAENKPVSLIEFMYPILQGYDSVELKA 197

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLN 248
           +    +++G ++Q  N++ G DL +     +   +  P+L    G  KM K+L   I + 
Sbjct: 198 D----VELGATEQKFNLLRGRDLQKNFGQEQQVCMIMPILVGLDGVEKMSKSLGNYIGV- 252

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAKKIIATE 305
               +P + +    +I D  + ++   +T +P   I+ +            EAKK +  E
Sbjct: 253 --KDTPNDMFGKVMSISDELMENYYTMITDVPFERIEEIKVQIADGSLHPMEAKKQLGAE 310

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV-KAGFATS 364
           +  + +G E A++A       F     +  +P + +   EV    G++ L+V +     +
Sbjct: 311 VVKIYYGEEAAKEARDWFENVFSKRNLNVDLPEVELEYKEV----GIIDLLVKETELLQT 366

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           T+EARR ++    KIN+  I + K  + L+       + +  GKK  +   
Sbjct: 367 TSEARRLIQQGGFKINDEPIKDVKATVILE-----SGMIIRAGKKKIVKVK 412


>gi|198436589|ref|XP_002122779.1| PREDICTED: similar to GE11414 [Ciona intestinalis]
          Length = 514

 Score =  372 bits (956), Expect = e-101,   Method: Composition-based stats.
 Identities = 119/437 (27%), Positives = 191/437 (43%), Gaps = 30/437 (6%)

Query: 6   SDFLSILSERGFIHQISNPR--ELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
            + L  L ERG +  I  P    L  L        Y G+D TA  LH G+L  +M+L   
Sbjct: 59  KNVLK-LHERGILQDIYPPAAVGLPGLLESKQQCFYCGFDPTADGLHVGNLLSIMVLLHC 117

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK------YG 117
           Q+ GH  I+++G  T   GDPS   + R M+    IQ+N+  I+   +          Y 
Sbjct: 118 QRAGHNVIAVIGNATVRAGDPSEHTKDRNMLSDNAIQDNVNAIQDCIAKIADTHANYIYD 177

Query: 118 TGKT----DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLE 173
                   D  +L N+TW   +  ID +      F +  M+    ++ R++  + L   E
Sbjct: 178 NKHRKKLPDFKILFNQTWYKELNAIDFISTACRNFRIGPMMEKRYIKDRIQSSEGLMLAE 237

Query: 174 FNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTAS 233
           F Y +LQAYD+  L  NY+C  Q+GG DQ GNI  G  L  +    +++AL +PL+T   
Sbjct: 238 FMYQVLQAYDWQYLHDNYNCTFQVGGVDQLGNINAGQQLIRKTNKGQVYALLTPLVTNLR 297

Query: 234 GTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK 293
           G K+GKT   ++WLN   T P+ F+Q++    D+ V +F K  T + +  I+ +     K
Sbjct: 298 GQKLGKTAGNSVWLNANKTPPFEFYQFFFKQPDSMVETFLKYFTFIDLKRINEIMIEHTK 357

Query: 294 EI--NEAKKIIATEITTMVHGREEAEKAATAAMECFDMS------IHSQHMPT----ISI 341
                 A++I+A  +  +VHG E  E A       F  S      +  + + T     +I
Sbjct: 358 HPHLRNAQRILAKHVCKLVHGPEGLESAERCTRALFGGSLEDIEKLSEEEIMTTFNATNI 417

Query: 342 SKDEVSRGMGLLTLIVKAGFAT--STNEARRHLKSNAIKINNSIISNEKLQI-KLQDFDS 398
               +     +  +   A      +  E    +++  ++IN   + +  L +   +    
Sbjct: 418 VTAVLEPDTTVYDVATHAKAIPLGNKGE--NLIRAGGVRINGETVDSPHLILMNGEHVLK 475

Query: 399 TGNIKLSFGKKNHIICH 415
                LS GK NH I  
Sbjct: 476 NDLTVLSVGKTNHFIIK 492


>gi|172035948|ref|YP_001802449.1| tyrosyl-tRNA synthetase [Cyanothece sp. ATCC 51142]
 gi|171697402|gb|ACB50383.1| tyrosyl tRNA synthetase [Cyanothece sp. ATCC 51142]
          Length = 407

 Score =  372 bits (956), Expect = e-101,   Method: Composition-based stats.
 Identities = 98/395 (24%), Positives = 173/395 (43%), Gaps = 25/395 (6%)

Query: 23  NPRELDILCSQ--GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSI 80
               L+ L  Q    +   +G D T + +H GH      L   Q  GH  + ++G  T+ 
Sbjct: 30  PEENLEKLIEQCHRPLRVKLGIDPTGTDIHLGHSIPFRKLRGFQDAGHTAVVIIGDFTAQ 89

Query: 81  IGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDL 140
           IGDP+ + E R+ +  QE++ N E         + + T      +  N  WL  +     
Sbjct: 90  IGDPTGKSEVRKQLTPQEVKNNAENYLEQLRPILDFDTP-GRLEIRYNSEWLKELNLAK- 147

Query: 141 LREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGS 200
           ++E+ +  +V +ML+ E    R K+E  +   EF Y ++Q YD V +  +    +++GG+
Sbjct: 148 IQELLATMTVGQMLAKEGFAERYKQENPIFLHEFLYPLMQGYDSVMIDAD----VELGGT 203

Query: 201 DQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQ 259
           DQ  NI  G DL         F L  P+L    G  KM K+L+  + L ++     + + 
Sbjct: 204 DQKFNIAVGRDLQRHFGKKPQFGLLLPILLGTDGSQKMSKSLNNYVGLKEDEL---SMYS 260

Query: 260 YWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKA 319
                 DA +  + + LT LP+ ++ +          + +K++A EI T  HG+E A  A
Sbjct: 261 KLEKTPDAIIKDYFELLTNLPLDQLPQ-------NPRDCQKLLAIEIVTQFHGKEAALSA 313

Query: 320 ATAAMECF--DMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAI 377
              A +      +  +  +P   +S  E      L  ++  +G   S+ E RR ++  A+
Sbjct: 314 QKTAEDLVKNKGTGVTDAVPEYDLSNVEF--PAKLFYILNASGLCGSSGEGRRQIQGGAV 371

Query: 378 KINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           +++   I++    I  +D +      L  GKK  I
Sbjct: 372 RLDGEKITDVN--ITFEDLEQLSGKVLQVGKKKFI 404


>gi|224438178|ref|ZP_03659113.1| tyrosyl-tRNA synthetase [Helicobacter cinaedi CCUG 18818]
 gi|313144623|ref|ZP_07806816.1| tyrosyl-tRNA synthetase [Helicobacter cinaedi CCUG 18818]
 gi|313129654|gb|EFR47271.1| tyrosyl-tRNA synthetase [Helicobacter cinaedi CCUG 18818]
          Length = 400

 Score =  372 bits (956), Expect = e-101,   Method: Composition-based stats.
 Identities = 107/419 (25%), Positives = 179/419 (42%), Gaps = 33/419 (7%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M   K   +  + E  +IH +          +        G+D TA  LH GH   L  L
Sbjct: 7   MQELKRGCVEFIGE-NYIHTLVE----RFYKNGKRFCVKAGFDPTAPDLHLGHTVLLQKL 61

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              QK G     L+G  T+ IGDPS + E+R+ +  ++++ N    K      +     +
Sbjct: 62  ATFQKYGGDVKFLIGDFTATIGDPSGKSETRKPLSKEQVEANAITYKEQVFKVLDPKYTE 121

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N  WL  +    ++  + S FSV RML  +    R    Q +S +EF Y +LQ
Sbjct: 122 ----VCFNSKWLSELGAGGII-HLTSKFSVARMLERDDFTKRYNNNQPISMVEFMYPLLQ 176

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASGT-KMG 238
            YD V L    +C +++GG+DQ  N++ G  L        +   +T PLL    G  KM 
Sbjct: 177 GYDSVAL----ECDIELGGNDQKFNLLVGRSLQRSYGLDKEQSVMTMPLLEGLDGVNKMS 232

Query: 239 KTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL---QGKEI 295
           K+L+  I + +   +    +    +I D  +  + + L++L + EI  +      Q    
Sbjct: 233 KSLNNYIGVTESANT---MYAKILSISDEMMWRYYELLSSLSLQEIAELKAQVESQKAHP 289

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTL 355
              K+ +A EIT   H  + A+KA       F        + T +  KDE      +  +
Sbjct: 290 KSVKEQLALEITQRYHNIDLAKKAKIEFDNVFSKDEIPADLATFTCEKDE-----WIAKV 344

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +  A    ST++ARR +++ A+KIN   I++E L++       +G   +  GK+     
Sbjct: 345 LTYAQLCESTSQARRDIRAGAVKINKEKITDENLKLS------SGEYIVQIGKRRFAKV 397


>gi|148379187|ref|YP_001253728.1| tyrosyl-tRNA synthetase [Clostridium botulinum A str. ATCC 3502]
 gi|153933038|ref|YP_001383564.1| tyrosyl-tRNA synthetase [Clostridium botulinum A str. ATCC 19397]
 gi|153936237|ref|YP_001387113.1| tyrosyl-tRNA synthetase [Clostridium botulinum A str. Hall]
 gi|148288671|emb|CAL82752.1| tyrosyl-tRNA synthetase [Clostridium botulinum A str. ATCC 3502]
 gi|152929082|gb|ABS34582.1| tyrosyl-tRNA synthetase [Clostridium botulinum A str. ATCC 19397]
 gi|152932151|gb|ABS37650.1| tyrosine--tRNA ligase [Clostridium botulinum A str. Hall]
          Length = 400

 Score =  372 bits (956), Expect = e-101,   Method: Composition-based stats.
 Identities = 110/406 (27%), Positives = 184/406 (45%), Gaps = 33/406 (8%)

Query: 18  IHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPIS 72
           + +I N  +L     +       +T  +G D TA  +H GH   L  +  LQ  GH+ + 
Sbjct: 15  VDEIINVEDLKSKLEKSQKTGKPMTVKLGLDPTAPDIHIGHSVVLRKIRQLQDLGHRAVI 74

Query: 73  LMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL 132
           ++G  T  IGDP+ + ++R+ +   E+  N +  +      I             N  WL
Sbjct: 75  IIGDFTGRIGDPTGKSKTRKPLTQDEVMFNAKTYEEQIFKIIDKDKTDLK----FNSEWL 130

Query: 133 CSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYD 192
             +   D + E+ S ++V RML  E  + R +   S+   EF Y +LQA+D V L  +  
Sbjct: 131 GKLSLRDTI-ELTSKYTVARMLEREDFKKRFESHSSIGIHEFFYPLLQAFDSVSLKAD-- 187

Query: 193 CRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEM 251
             +++GG+DQ  N++ G  + +        A+  PLL    G  KM K+L   I +N++ 
Sbjct: 188 --IELGGTDQRFNLLMGRTIQKDFDQESQVAILMPLLEGTDGKDKMSKSLGNYIGINEDA 245

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE---INEAKKIIATEITT 308
               + +    +I D  +V + +  T +   E+ ++    G+E     + K  +A EI  
Sbjct: 246 N---DIYGKVMSIPDGMIVKYYELATDIHPDEVAKIKARLGEEKVNPRDIKMELAKEIVR 302

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
           + HG E + KA       F      + +  I ++  E      ++ LIVKA FA S NEA
Sbjct: 303 LYHGEEASVKAEVNFKNIFQQGNIPEDIDIIKVNLTE----TNIVDLIVKAKFAPSKNEA 358

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           RR +K  A+KIN   + +E+ ++K +D        L  GKK  I  
Sbjct: 359 RRLVKQGAVKINGEKV-DEECKVKNED-------ILQVGKKKFIKI 396


>gi|113474316|ref|YP_720377.1| tyrosyl-tRNA synthetase [Trichodesmium erythraeum IMS101]
 gi|110165364|gb|ABG49904.1| tyrosyl-tRNA synthetase [Trichodesmium erythraeum IMS101]
          Length = 405

 Score =  372 bits (956), Expect = e-101,   Method: Composition-based stats.
 Identities = 97/391 (24%), Positives = 180/391 (46%), Gaps = 23/391 (5%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSF 86
           L +      +   +G D T   +H GH   +  L   Q  GH  + ++G  T+ +GDP+ 
Sbjct: 32  LKLTTLDRPLRVKLGIDPTGVDVHLGHSIPVRKLRAFQDAGHTAVLIIGDFTARVGDPTG 91

Query: 87  RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGS 146
           + E+RR +  +++QEN +         + + T      +  N  WL  +   D+L E+ +
Sbjct: 92  KSEARRQLTPEQVQENAKTYLDQVRPILDFDTP-GRLEIRYNSEWLSKLDLADIL-ELLA 149

Query: 147 FFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNI 206
             +V +ML+ E    R ++E  +   EF Y ++Q YD V +  +    +++GG+DQ  NI
Sbjct: 150 TMTVGQMLAKEGFALRYQQENPIYIHEFLYPLMQGYDSVAVDAD----VELGGTDQKFNI 205

Query: 207 ICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYWRNID 265
             G DL         F L  P+L    G  KM K+L   + L+++   P + +     I 
Sbjct: 206 AVGRDLQRHFGKRTQFGLLMPILLGTDGVQKMSKSLGNYVGLSED---PLSMYSKLEKIP 262

Query: 266 DADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAME 325
           D  V ++ + LT L +++ID       K   E +K++A +I +  H +E A +A   A++
Sbjct: 263 DDQVENYFELLTNLNINDID-------KNPRERQKLLALDIVSQYHSQEAALEAQQTAVK 315

Query: 326 CFDMSI--HSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSI 383
                    ++ +P  S++  E      L  ++  +G   S++EAR+ +   A+++++  
Sbjct: 316 MVIKGDMSQTEAVPEFSLASVEF--PAKLFYVVSASGLCKSSSEARKKIAGGAVRLDDER 373

Query: 384 ISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           IS++   +            L  GKKN +  
Sbjct: 374 ISDQNFTLDSPADLDGK--VLRVGKKNFVRL 402


>gi|297172443|gb|ADI23416.1| tyrosyl-tRNA synthetase [uncultured gamma proteobacterium
           HF0770_33G18]
          Length = 374

 Score =  372 bits (956), Expect = e-101,   Method: Composition-based stats.
 Identities = 88/391 (22%), Positives = 169/391 (43%), Gaps = 22/391 (5%)

Query: 29  ILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRD 88
            L     +   +G+D TA  LH GH   +  +   Q  GH+ I ++G  T +IGDPS + 
Sbjct: 2   RLKGDRPLRVKVGFDPTAPDLHLGHTVVVNKMRQFQDFGHEIIFVIGDFTGMIGDPSGKS 61

Query: 89  ESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFF 148
            +R  +   EI++N    +      +          +  N  W   +    L+R + + +
Sbjct: 62  VTRPPLLPDEIEKNAVTYREQVFKILD----PKKTRIEFNSVWSNELGAEGLIR-LAARY 116

Query: 149 SVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIIC 208
           +V R+L  +   +R +  + ++  E  Y ++Q YD V L    +  +++GG+DQ  N++ 
Sbjct: 117 TVARILERDDFSTRYRNREPIAIHELLYPLMQGYDSVAL----EADVELGGTDQKFNLLV 172

Query: 209 GIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDA 267
           G +L ++        LT PLL    G  KM K+L   + +      P   +    +I D 
Sbjct: 173 GRELQKQYGQAPQIVLTVPLLEGLDGVQKMSKSLGNYVGIT---DLPEEMFGKLMSISDD 229

Query: 268 DVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAME 325
            +  + + L+   +SE++  ++   QG    + K ++A EI    H    A +A    + 
Sbjct: 230 LMWRYFELLSLRNVSELEQLKIDAAQGMNPRDIKYMLAGEIVERFHSASHARRAKEEFVN 289

Query: 326 CFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIIS 385
            F        +    ++ +     M +  +I +AG   ST+EA R L+  A++I+   ++
Sbjct: 290 RFQKGAMPARIVEKVVNSN--GEDMPIARVIKEAGLVASTSEALRMLEQGAVRIDGERVT 347

Query: 386 NEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +   +I + D        +  GK+      +
Sbjct: 348 DRDRKIGVGDAG-----IIQVGKRRFARIRV 373


>gi|218247683|ref|YP_002373054.1| tyrosyl-tRNA synthetase [Cyanothece sp. PCC 8801]
 gi|257060980|ref|YP_003138868.1| tyrosyl-tRNA synthetase [Cyanothece sp. PCC 8802]
 gi|218168161|gb|ACK66898.1| tyrosyl-tRNA synthetase [Cyanothece sp. PCC 8801]
 gi|256591146|gb|ACV02033.1| tyrosyl-tRNA synthetase [Cyanothece sp. PCC 8802]
          Length = 407

 Score =  372 bits (955), Expect = e-101,   Method: Composition-based stats.
 Identities = 95/396 (23%), Positives = 167/396 (42%), Gaps = 25/396 (6%)

Query: 24  PRELDILCSQ--GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSII 81
              L+ L  Q    +   +G D T S +H GH      L   Q  GH  + ++G  T+ I
Sbjct: 31  EENLEQLLKQCDRPLRVKLGIDPTGSDIHLGHSIPFRKLRMFQDAGHTAVVIIGDFTAQI 90

Query: 82  GDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLL 141
           GDP+ + E R+ +  +++Q N +         + + T      +  N  WL  +     +
Sbjct: 91  GDPTGKSEVRKQLTPEQVQANAKNYLEQLHPILDFDTP-GRLEIRYNSQWLSQLNLAK-I 148

Query: 142 REIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSD 201
           +E+ +  +V +ML+ E    R K+E  +   EF Y ++Q YD V +  +    +++GG+D
Sbjct: 149 QELLATMTVGQMLAKEGFAERFKQENPIFLHEFLYPLMQGYDSVMIDAD----VELGGTD 204

Query: 202 QWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQY 260
           Q  NI  G DL         F L  P+L    G  KM K+L+  + L      P + +  
Sbjct: 205 QKFNIAVGRDLQRHFGKKPQFGLLLPILIGTDGSQKMSKSLNNYVGL---KEGPLSMYSK 261

Query: 261 WRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAA 320
                DA +  + + LT   +  +            + +K +A EI +  HG++ A  A 
Sbjct: 262 LEKTPDALIKEYFELLTNFSLDTLPE-------NPRDCQKQLAVEIVSQFHGKDAALLAQ 314

Query: 321 TAAMECFDMSI--HSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIK 378
             A E     I   +  +P   +S+ E      L  ++  +G   S+ + RR L+  A++
Sbjct: 315 KTAEELVTQGIGTSTDAVPEYELSQVEF--PAKLFYILSASGLCESSGDGRRQLQGGAVR 372

Query: 379 INNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           I+ + +++  L     +        L  GKK  I  
Sbjct: 373 IDGTRVTDPNLIFNTPEELYGK--VLQVGKKKFIRL 406


>gi|313111703|ref|ZP_07797496.1| tyrosyl-tRNA synthetase 2 [Pseudomonas aeruginosa 39016]
 gi|310883998|gb|EFQ42592.1| tyrosyl-tRNA synthetase 2 [Pseudomonas aeruginosa 39016]
          Length = 399

 Score =  372 bits (955), Expect = e-101,   Method: Composition-based stats.
 Identities = 105/408 (25%), Positives = 173/408 (42%), Gaps = 24/408 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG    +     +  L     +    G+D TA  LH GH   +  L   Q  GH+ I
Sbjct: 10  LIQRGADEILVEAELVAKLKRGQPLRIKAGFDPTAPDLHLGHTVLINKLRQFQDLGHQVI 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T +IGDPS +  +R  +  +++ EN E  K      +     +    +  N TW
Sbjct: 70  FLIGDFTGMIGDPSGKSVTRPPLTREQVLENAETYKSQVFKILDPAKTE----VAFNSTW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +  +   D +R + S ++V RML  +    R    Q ++  EF Y ++Q YD V L  + 
Sbjct: 126 MDQLTPADFIR-LASQYTVARMLERDDFSKRYASNQPIAIHEFLYPLVQGYDSVALKAD- 183

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G +L           LT PLL    G  KM K+L   I + + 
Sbjct: 184 ---VELGGTDQKFNLLMGRELQRAYGQEAQVILTMPLLEGLDGVKKMSKSLGNYIGIQE- 239

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEITT 308
             +P   +    +I D  +  + + L+   + EID  R     G    + K  +A EI  
Sbjct: 240 --APGVMYSKLVSIPDTLMWRYFELLSFRSLDEIDSFRKDVEAGANPRDIKIKLAEEIVA 297

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
             HG E A  A  +A          + +P I +S  E    M + +++ KAG A +   A
Sbjct: 298 RFHGEEAAASAHKSAGNRLKEGELPEDLPEIELSSPE---DMPVASVLNKAGLAKNAAAA 354

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           R  L + ++K++  ++ +    + L             GKK      L
Sbjct: 355 RDLLGAGSVKVDGQVV-DRTFMLAL-----GETRVFQAGKKAFARITL 396


>gi|257455122|ref|ZP_05620360.1| tyrosyl-tRNA synthetase [Enhydrobacter aerosaccus SK60]
 gi|257447455|gb|EEV22460.1| tyrosyl-tRNA synthetase [Enhydrobacter aerosaccus SK60]
          Length = 406

 Score =  371 bits (954), Expect = e-101,   Method: Composition-based stats.
 Identities = 96/409 (23%), Positives = 184/409 (44%), Gaps = 22/409 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG    IS    +  L     +    G+D TA  LH GH   +  L   Q  GH+ +
Sbjct: 17  LIQRGTHEIISQDDLIKKLKENRPLRVKAGFDPTAPDLHLGHTVLINKLKHFQDLGHQVL 76

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T+ IGDP+ ++ +R  +  ++I EN +  K      +     +    ++ N  W
Sbjct: 77  FLIGDYTARIGDPTGKNTTRPPLSEEKILENAQTYKEQVFKILDPAKTQ----VMFNSDW 132

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
              +   D++  + S  +V+RML  +    R   +  +S  EF Y ++Q YD V +  + 
Sbjct: 133 FSKMSAGDMIG-LASQQTVSRMLERDDFSKRYHSQTPISIHEFLYPLVQGYDSVAMQAD- 190

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G  L  R        +T P+L    G  KM K+L   I +   
Sbjct: 191 ---VELGGTDQTFNLLMGRTLQSRYGQVPQVCITVPILEGLDGVQKMSKSLGNYIGI--- 244

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATEITT 308
             S  + +Q   ++ D  +  + + L+  PM E++ + K    G+   E K+I+A E+  
Sbjct: 245 YDSAGSMYQKILSMPDTLIARYFELLSFKPMDEVEALLKDIENGRNPQEVKRILALELIE 304

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
             H +E AE A  +A            +P ++IS D  ++ + +  ++ +A    ++ +A
Sbjct: 305 RFHDKEAAENAHKSAGNRLVEGELPVDLPEVTISLDGQAQ-LFITQVLNQANLVKNSAQA 363

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           +  LK+ ++K++  ++ +    +          + +  GKK +    + 
Sbjct: 364 KDFLKNQSVKVDGQVV-DAGFALTA-----GQTVVIQAGKKAYAKVTIS 406


>gi|332975025|gb|EGK11935.1| tyrosine--tRNA ligase [Desmospora sp. 8437]
          Length = 418

 Score =  371 bits (954), Expect = e-101,   Method: Composition-based stats.
 Identities = 102/407 (25%), Positives = 180/407 (44%), Gaps = 27/407 (6%)

Query: 19  HQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
            QI    EL+    +       +   +G D +A  +H GH   L  L   Q+ GH    +
Sbjct: 27  AQIIPEDELEKKVKRSIRTGKPLKVKLGLDPSAPDIHIGHTVILNKLRQFQELGHIVQLV 86

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
           +G  T  IGDPS + E+R+ +   E++ N +         +     +    +  N  WL 
Sbjct: 87  IGDFTGRIGDPSGKSETRKQLSEAEVKANAQTYAEQLFKVLDRDKTE----VRFNSEWLA 142

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDC 193
           S+ +  ++ E+ +  +V RML  +    R    Q++S  EF Y ++Q YD V L  +   
Sbjct: 143 SLDFAAVV-ELAAKTTVARMLERDDFAKRYHSGQAISVHEFFYPLMQGYDSVALQSD--- 198

Query: 194 RLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMT 252
            ++ GG+DQ  N++ G  L  +    +   LT PLL    G  KM K+L   I +++   
Sbjct: 199 -IETGGTDQTFNLLMGRQLQSQYGQEEQVILTMPLLEGLDGVKKMSKSLGNYIGIDEPAQ 257

Query: 253 SPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKIIATEITTM 309
                +    ++ D  ++ + + +T L + E+DR+    K       +AK ++A  +  M
Sbjct: 258 ---EMYGKAMSVPDELMLKYFELVTDLTLEELDRLRAGLKEGSIHPRDAKMMLAGRLVQM 314

Query: 310 VHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTNEA 368
            HG+E A +A       F      + +P   I   E+  G + ++ L+   G  +S  EA
Sbjct: 315 YHGQEAAAEAEAHFRRVFQQRELPEEIPEKEIPDSELEEGKLWIVQLLSSLGLVSSNGEA 374

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           RR +K  A+KI+   IS++  +I + D      + +  GK+      
Sbjct: 375 RRMVKQGAVKIDGDKISDQDARITVND-----GMVIQVGKRKFARVK 416


>gi|118602182|ref|YP_903397.1| tyrosyl-tRNA synthetase [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
 gi|118567121|gb|ABL01926.1| tyrosyl-tRNA synthetase [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
          Length = 394

 Score =  371 bits (954), Expect = e-101,   Method: Composition-based stats.
 Identities = 96/383 (25%), Positives = 178/383 (46%), Gaps = 26/383 (6%)

Query: 37  TAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRS 96
               G+D TA  LH GH   +  L  LQ  GH+ + L+G  T++IGDP+ + ++R  +  
Sbjct: 34  RIKTGFDPTAPDLHLGHTILINKLKQLQDLGHEILFLIGDFTAMIGDPTGKSKTRPPLSR 93

Query: 97  QEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSF 156
           ++IQEN +         +     K    ++ N  W+  +  ++ + ++ S  +V +ML  
Sbjct: 94  EQIQENAKSYTKQVFKILD----KDKTTVVFNSQWMDKMTSMEFI-QLASKQTVAKMLEH 148

Query: 157 ESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL 216
           ++   R K  Q++S  EF Y ++Q  D VEL  +    +++GG+DQ  N++ G +L ++ 
Sbjct: 149 DNFSKRYKSGQAISIHEFLYPLVQGNDSVELKSD----VEIGGTDQKFNLLVGRELQKQA 204

Query: 217 KTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKR 275
              +   LT P+L    G  KM K+L+  I ++    +P   +    +I D  +  + + 
Sbjct: 205 GQEQQVILTMPILEGLDGVQKMSKSLNNYIGID---DTPDEMFGKIMSISDELMWRYFEL 261

Query: 276 LTTLPMSEID--RMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS 333
           L+   +  I   + A +QGK   + K I+A EI T  H  + A++     ++ F  +   
Sbjct: 262 LSFQSLKVITDLKQAMMQGKNPRDIKFILADEIITRFHNIDTAKQMQQNFIDRFSKNQMP 321

Query: 334 QHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL 393
             M   S        G+ +  L+   G  +ST+ A + +     KIN   I+++ L+++ 
Sbjct: 322 DEMDKFS-----FKAGIKIANLLKDTGLCSSTSNAYQMINQGGAKINGKKITDKNLELE- 375

Query: 394 QDFDSTGNIKLSFGKKNHIICHL 416
                TG      GK+      +
Sbjct: 376 -----TGTNIYQVGKRKFARVTI 393


>gi|256821638|ref|YP_003145601.1| tyrosyl-tRNA synthetase [Kangiella koreensis DSM 16069]
 gi|256795177|gb|ACV25833.1| tyrosyl-tRNA synthetase [Kangiella koreensis DSM 16069]
          Length = 398

 Score =  371 bits (954), Expect = e-101,   Method: Composition-based stats.
 Identities = 105/419 (25%), Positives = 185/419 (44%), Gaps = 25/419 (5%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M   ++ F  I  +RG    +     L+ L S   +    G+D TA  LH GH   +  L
Sbjct: 1   MTDVQAAFAEI--KRGAEEILLEDELLEKLKSGKPLKIKAGFDPTAPDLHLGHTVLINKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+ I L+G  T +IGDP+ ++ +R+ +   ++  N E  K      +      
Sbjct: 59  RQFQQLGHEVIFLIGDFTGMIGDPTGKNATRKPLTRDDVLANAETYKEQVFKILDPAKT- 117

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N  W   +    +++ + S  +V RML  +  + R   EQ ++  EF Y ++Q
Sbjct: 118 ---TIAFNSEWCEKLGAAGMIK-LASHTTVARMLERDDFKKRYGNEQPIAIHEFLYPLVQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGK 239
            YD V L  +    +++GG+DQ  N++ G +L +         L  PLL    G  KM K
Sbjct: 174 GYDSVALESD----VELGGTDQRFNLLMGRELQKHYGQRPQTVLMMPLLEGLDGVQKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINE 297
           +L   + + +   +P   +Q   +I D+ +  + + L+  P+ EID + K   QG    +
Sbjct: 230 SLGNYVGITE---APGVMYQKLLSIPDSMMWRYFELLSFRPLPEIDELKKQVEQGANPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K  +A EI    H +E A+ A  AA          +  P + +   E +    +   I 
Sbjct: 287 IKIELAKEIIERFHDKEAADNAHKAAGNIIKEGEVPEGTPQVEVDM-EGAEQFPIGATIN 345

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +AG A+++ +A+  LK+  +K++  ++    L +K       G   +  GKK      L
Sbjct: 346 RAGLASNSAQAKDMLKNGRVKVDWEVVE-PSLMLKP------GQYLIQAGKKKIAYVTL 397


>gi|315452765|ref|YP_004073035.1| tyrosyl-tRNA synthetase [Helicobacter felis ATCC 49179]
 gi|315131817|emb|CBY82445.1| tyrosyl-tRNA synthetase [Helicobacter felis ATCC 49179]
          Length = 400

 Score =  371 bits (954), Expect = e-100,   Method: Composition-based stats.
 Identities = 100/384 (26%), Positives = 168/384 (43%), Gaps = 28/384 (7%)

Query: 38  AYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQ 97
              G+D TA  LH GH   L  L  LQK G     L+G  T+ IGDPS + E+R+ +  +
Sbjct: 39  VKAGFDPTAPDLHLGHAVLLEKLATLQKHGGFVKFLIGDFTARIGDPSGKSETRKPLSEE 98

Query: 98  EIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFE 157
            +QEN +         +     +    +  N TWL  +    +L  + S FSV RML  +
Sbjct: 99  AVQENAKTYAKQVFRVLDPALTE----VCFNSTWLNPLGTSGILA-LTSKFSVARMLERD 153

Query: 158 SVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK 217
               R +  Q +S +EF Y +LQ YD V L    +C L++GG+DQ  N++ G  L     
Sbjct: 154 DFEKRYRNHQPISIVEFLYPLLQGYDSVVL----ECDLELGGNDQKFNLMVGRFLQRAYG 209

Query: 218 -TPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKR 275
              +   LT PLL    G  KM K+L   I + +E   P + +    +I D  +  + + 
Sbjct: 210 LDKEQSVLTMPLLEGLDGVHKMSKSLGNYIGITEE---PASMYAKLLSISDDLMWRYYEL 266

Query: 276 LTTLPMSEID---RMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIH 332
           L+     +I       +         K+ +A EIT   H  E+A+ A     + F     
Sbjct: 267 LSAKTSDQIANLQEAVRAHRAHPKAVKEELALEITARWHSEEQAQSAKAEFDKVFRHKQT 326

Query: 333 SQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
              MP           G  + +++ +     S+++ARR +    +++N+ ++ +++ Q  
Sbjct: 327 PSQMPE-----WHFENGAWIASVLKECQLCPSSSQARRDILGGGVRLNHEVMKDDQYQFS 381

Query: 393 LQDFDSTGNIKLSFGKKNHIICHL 416
                  G+  +  GK+   + H+
Sbjct: 382 K------GSYIVQVGKRKFALVHI 399


>gi|168178623|ref|ZP_02613287.1| tyrosyl-tRNA synthetase [Clostridium botulinum NCTC 2916]
 gi|182670690|gb|EDT82664.1| tyrosyl-tRNA synthetase [Clostridium botulinum NCTC 2916]
          Length = 400

 Score =  371 bits (954), Expect = e-100,   Method: Composition-based stats.
 Identities = 108/406 (26%), Positives = 183/406 (45%), Gaps = 33/406 (8%)

Query: 18  IHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPIS 72
           + +I N  +L     +       +T  +G D TA  +H GH   L  +  LQ  GH+ + 
Sbjct: 15  VDEIINVEDLKSKLEKSQKTGKPMTVKLGLDPTAPDIHIGHSVVLRKIRQLQDLGHRAVI 74

Query: 73  LMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL 132
           ++G  T  IGDP+ + ++R+ +   E+  N +  +      I             N  WL
Sbjct: 75  IIGDFTGRIGDPTGKSKTRKPLTQDEVMFNAKTYEEQIFKIIDKDKTDLK----FNSEWL 130

Query: 133 CSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYD 192
             +   D + E+ S ++V RML  E  + R +   S+   EF Y +LQA+D V L  +  
Sbjct: 131 GKLSLRDTI-ELTSKYTVARMLEREDFKKRFESHSSIGIHEFFYPLLQAFDSVSLNAD-- 187

Query: 193 CRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEM 251
             +++GG+DQ  N++ G  + +        A+  PLL    G  KM K+L   I +N++ 
Sbjct: 188 --IELGGTDQRFNLLMGRTIQKDFDQESQVAILMPLLEGTDGKDKMSKSLGNYIGINEDA 245

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSE---IDRMAKLQGKEINEAKKIIATEITT 308
               + ++   +I D  +V + +  T +   E   I    + +     + K  +A EI  
Sbjct: 246 N---DIYEKVMSIPDGMMVKYYELATDIHPDEVAKIKARLEEENVNPRDIKMELAKEIVR 302

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
           + H +E + KA       F      + + TI ++  E      ++ LIVKA FA S NEA
Sbjct: 303 LYHEKEASIKAEANFKNIFQQGNIPEDIDTIKVNLTE----TNIVDLIVKAKFAPSKNEA 358

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           RR +K  A+KI+   + +E+ ++K +D        L  GKK  I  
Sbjct: 359 RRLVKQGAVKIDGEKV-DEECKVKNED-------ILQVGKKKFIKI 396


>gi|297624191|ref|YP_003705625.1| tyrosyl-tRNA synthetase [Truepera radiovictrix DSM 17093]
 gi|297165371|gb|ADI15082.1| tyrosyl-tRNA synthetase [Truepera radiovictrix DSM 17093]
          Length = 394

 Score =  371 bits (954), Expect = e-100,   Method: Composition-based stats.
 Identities = 98/396 (24%), Positives = 185/396 (46%), Gaps = 22/396 (5%)

Query: 24  PRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIG 82
             +L +   +G  +   +G D ++  LH GH   L  +   Q  GHK + ++G  T+ IG
Sbjct: 18  EEKLALARREGRPLRVKLGVDPSSPDLHLGHAVVLRKMRDFQDAGHKVVLIIGDFTATIG 77

Query: 83  DPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLR 142
           DPS + ++R ++  ++ + N E      +  +     K +  +  N  WL  + + +L++
Sbjct: 78  DPSGKSKTRPVLSLEQTRRNSESYVAQATKILDPNPDKLE--LRYNSEWLAPLGFAELIK 135

Query: 143 EIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQ 202
            + S ++V RML  +    R      +S  EF Y + QAYD V +  +    +++GG+DQ
Sbjct: 136 -LASSYTVARMLERDDFTKRYAAGVPISIHEFLYPLAQAYDSVAIRAD----VELGGTDQ 190

Query: 203 WGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYW 261
             N++ G D+          ALT PLL    G  KM K+L   I + +   +P   ++  
Sbjct: 191 LFNLLVGRDVQRAYGQAPQVALTMPLLEGLDGVEKMSKSLGNYIGVAE---APEVMFKKA 247

Query: 262 RNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAAT 321
             + DA +  + +  T+ P+ E   + +    +I EA ++ A E+  + HG E  ++A  
Sbjct: 248 MLVPDALLYRYFELCTSFPLGEARALIEQ---DIKEAHRVFARELVRLYHGPEPIQEA-E 303

Query: 322 AAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTNEARRHLKSNAIKIN 380
           A  +          +P +++S D    G + +  L   AG +TS  +ARR +++  +K++
Sbjct: 304 ARYDHVAKGGIPDDVPELTLSADATQDGVIWVCKLATLAGLSTSNGDARRLIQNRGLKLD 363

Query: 381 NSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             ++ +  LQ++L        + L  GK   +   L
Sbjct: 364 GEVVEDVNLQVRL-----DAPVVLQRGKDRFVRVRL 394


>gi|257784812|ref|YP_003180029.1| tyrosyl-tRNA synthetase [Atopobium parvulum DSM 20469]
 gi|257473319|gb|ACV51438.1| tyrosyl-tRNA synthetase [Atopobium parvulum DSM 20469]
          Length = 403

 Score =  371 bits (954), Expect = e-100,   Method: Composition-based stats.
 Identities = 107/397 (26%), Positives = 180/397 (45%), Gaps = 21/397 (5%)

Query: 20  QISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGT 78
           QI     L     +G  +   +G D T+  LH GH   L  +   Q  GH    ++G GT
Sbjct: 17  QIVPLDGLKEKLKKGTPLNIKLGVDPTSPDLHLGHAVPLRKMRQFQDLGHNVTLIIGSGT 76

Query: 79  SIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYI 138
           ++IGDPS RD +R  + ++++  N E         +          +++N  W+  +   
Sbjct: 77  ALIGDPSGRDSTRPPLTAEQVDANAETYVNQAMKILD----PERTTVVHNGDWIKPMNLE 132

Query: 139 DLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMG 198
            +L  + S F++ R+L  E   +R   +Q ++  EF Y +LQAYD V +  +    ++MG
Sbjct: 133 TMLG-LMSKFTIARILEREDFSNRYHNQQPIALHEFIYPVLQAYDSVVIKAD----VEMG 187

Query: 199 GSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNF 257
           G+DQ  N++ G DL   +      ALT PLL    GT KM K+    I L  E   P + 
Sbjct: 188 GNDQIFNLLAGRDLMRDMDMEPQIALTMPLLVGTDGTKKMSKSYGNYIGLTDE---PNDM 244

Query: 258 WQYWRNIDDADVVSFAKRLTTLPMSE---IDRMAKLQGKEINEAKKIIATEITTMVHGRE 314
           +    +I D  +  + +  +TL + E   ID+  +    +  + K+ +   I  + HG  
Sbjct: 245 FGKVMSITDEIIPMYYRLCSTLSIDELDAIDKSFEDGTADPYQLKRALGRNIVDLYHGEG 304

Query: 315 EAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTNEARRHLK 373
           E  KA  +    F  +     +   +I+ +    G + L  ++V+AG A+S  EARR + 
Sbjct: 305 EGLKAQASFDAQFKNNEVPDDVKEFAITLEADEDGLIYLPKILVEAGIASSNGEARRLID 364

Query: 374 SNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
              IKIN   I+ +  +++    +      L  GKK 
Sbjct: 365 GCGIKINQKPIAAKTYKVEPSVLEGA---LLQAGKKR 398


>gi|188996488|ref|YP_001930739.1| tyrosyl-tRNA synthetase [Sulfurihydrogenibium sp. YO3AOP1]
 gi|188931555|gb|ACD66185.1| tyrosyl-tRNA synthetase [Sulfurihydrogenibium sp. YO3AOP1]
          Length = 400

 Score =  371 bits (954), Expect = e-100,   Method: Composition-based stats.
 Identities = 102/409 (24%), Positives = 179/409 (43%), Gaps = 25/409 (6%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            + ++G +  IS    L  L  +  +    G+D TA  LH GH   L  L   Q+ GH  
Sbjct: 9   EIIKKGVLEIISEEELLKKLKEERPLIVKAGFDPTAPDLHLGHTVLLQKLRTFQQLGHTV 68

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
             ++G  T++IGDPS RD++R  +  +++ EN +  K      +         +++ N  
Sbjct: 69  FFIIGDFTAMIGDPSGRDQTRPPLTKEQVLENAKTYKEQVFKVLD----PEKTVVVFNSE 124

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           WL  +   DL++ + + ++V RML  E  + R K    +S  EF Y +LQAYD V +  +
Sbjct: 125 WLGKMTAEDLIK-LSAKYTVARMLEREDFKKRFKENIPISIHEFIYPLLQAYDSVAIKAD 183

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLLTTASGT-KMGKTLSGAIWLN 248
               +++GGSDQ  N++ G D+ +         A+  PLL    G  KM K+    I + 
Sbjct: 184 ----VELGGSDQRFNLLIGRDIQKEYGIENPQVAILLPLLVGTDGVKKMSKSYGNYIGIT 239

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAKKIIATE 305
           +    P   +    +I D  +  + + LT L + EI+++ +   K      E KK +   
Sbjct: 240 E---PPEEMFGKIMSISDELMWQYWELLTDLTVEEINKLKEDVQKGILHPMEVKKQLGMY 296

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           I    H +E+A +A     +        + +P    S+   +    L  +I     A + 
Sbjct: 297 IVERFHSKEDAIRAREHFEKVHSKKEIPEDIPVFKASEITETE---LFEIIFNLKLAETK 353

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            EA+R +K   +K+N   I++   +  L        + +  GK+     
Sbjct: 354 AEAKRLIKQGGVKVNGEKITDPMHKPDLA-----RQLIIQVGKRKFAKI 397


>gi|327272181|ref|XP_003220864.1| PREDICTED: tyrosyl-tRNA synthetase, mitochondrial-like [Anolis
           carolinensis]
          Length = 481

 Score =  371 bits (953), Expect = e-100,   Method: Composition-based stats.
 Identities = 130/441 (29%), Positives = 217/441 (49%), Gaps = 27/441 (6%)

Query: 2   PAFKSDFLSILSERGFIHQISNPRELDILC------SQGVVTAYIGYDLTASSLHAGHLT 55
           P  +   L+   ERG  H++  P+  +          +  +  Y G+D TA SLHAGHL 
Sbjct: 30  PPKEKGLLASQCERGLFHEVFPPQAAEEHLLRLLEPGRPPIAVYCGFDPTADSLHAGHLL 89

Query: 56  QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK 115
            L+ L   Q+ GH  I+L+GG T+ +GDPS R ++R  +  ++ +   E ++       +
Sbjct: 90  PLLGLLHFQRAGHDVIALVGGATARLGDPSGRTQAREPLSEEKARAQAEGLREGLQRIFQ 149

Query: 116 -----YGTGKT--DALMLNNETWLCSIKYIDLL-REIGSFFSVNRMLSFESVRSRLKREQ 167
                + +G       +L+N +WL     +  L    G    ++ +LS +S R+RL+  +
Sbjct: 150 NHRELFWSGARLGRLTLLDNTSWLARETVLGFLCGPAGVRLRMSTLLSRQSCRARLESPE 209

Query: 168 SLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSP 227
            +   EF Y  LQAYDF+ L +++ C +Q+GG+DQ GNI+ G DL  ++    +F +T P
Sbjct: 210 GMGLAEFLYPALQAYDFLHLRRHHGCLVQLGGADQLGNIMSGYDLVSKVTGEDVFGITVP 269

Query: 228 LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM 287
           L+T   G K+GK+   A+WLN+  TSP++ +Q++    D DV  + K  T LP+ EID +
Sbjct: 270 LITNTVGNKLGKSSGNAVWLNRNKTSPFDLYQFFVRQPDKDVKRYLKLFTFLPLPEIDHI 329

Query: 288 AKLQGKEINE--AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS-QHMPTISIS-- 342
            ++  KE  +   +K +A E+T +VHG+E  E A       +   I + + MP   +   
Sbjct: 330 MEMHAKEPEKWGPQKRLAAEVTKLVHGKEGLESAKRCTRALYHSDIAALETMPDQELQEL 389

Query: 343 -------KDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL-Q 394
                  +  +  G  +L L  KA          R + S  + IN+  +++    + L Q
Sbjct: 390 FNEAPYVELLLEPGTTVLDLCRKANAIADGPRGHRDIISGGVSINHIKVTDPDAVLVLGQ 449

Query: 395 DFDSTGNIKLSFGKKNHIICH 415
                G   L  GK+N+ I  
Sbjct: 450 HILRNGLSLLRIGKRNYYIVK 470


>gi|300871541|ref|YP_003786414.1| tyrosyl-tRNA synthetase [Brachyspira pilosicoli 95/1000]
 gi|300689242|gb|ADK31913.1| tyrosyl-tRNA synthetase [Brachyspira pilosicoli 95/1000]
          Length = 398

 Score =  371 bits (953), Expect = e-100,   Method: Composition-based stats.
 Identities = 103/410 (25%), Positives = 175/410 (42%), Gaps = 27/410 (6%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            L  RG    I      + L S   +T   G+D TA  +H GH   L  +   Q  GHK 
Sbjct: 13  ELITRGASEIIGLEEIKEKLKSGKKLTVKAGFDPTAPDIHLGHTVLLRKMRHFQLLGHKV 72

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           I L+G  T  IGDPS + ++R  +  +++  N E  K      +         ++  N  
Sbjct: 73  IFLIGDFTGRIGDPSGKTKTRPRLSEEDVLRNAETYKQQVFKILD----PEKTIVEFNSK 128

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           WL  + + D+L  + S ++V +M+  +    R K  Q +S +EF Y + Q YD V L   
Sbjct: 129 WLGKMSFADVLG-LTSRYTVAQMIERDDFSKRYKNGQPISIMEFLYPLAQGYDSVSL--- 184

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNK 249
            +C +++GG+DQ  N++ G  L +         LT PLL    G  KM K+L   I +  
Sbjct: 185 -ECDVELGGNDQKFNLLVGRTLMKEYGLSPQAVLTVPLLEGLDGVEKMSKSLGNYIGV-- 241

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEIT 307
              SP + +    +I D  ++ + + +T +PM++I   + A  +G+     K I+A EI 
Sbjct: 242 -YDSPKDMYGKAMSIPDGLILKYMELVTDIPMNDIRNYKKAMEEGENPRNIKSILAKEIV 300

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
            + H  ++A  A       F        +  I + KD+      +L ++       S + 
Sbjct: 301 KLYHTEDDANNAEEEFKRIFSSKGVPDEIEEIVVGKDD-----NILNILSVCMKNESKSN 355

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            +R +   ++ ++N  I++    I            L  GK+N       
Sbjct: 356 LKRLISQGSVTLDNEKITDINSNI-------NKEGILKVGKRNFFKIKFS 398


>gi|114566637|ref|YP_753791.1| tyrosine--tRNA ligase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
 gi|114337572|gb|ABI68420.1| tyrosyl-tRNA synthetase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
          Length = 438

 Score =  371 bits (953), Expect = e-100,   Method: Composition-based stats.
 Identities = 112/416 (26%), Positives = 179/416 (43%), Gaps = 33/416 (7%)

Query: 11  ILSERGFIHQISNPRELDILC-----SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
            L  RG + +I    EL          +  + A +G D TA  +H GH   L  L   Q 
Sbjct: 47  ELIRRG-VAEIIPEEELAQKLFRSIKEKRPLRAKLGLDPTAPDIHLGHTVVLNKLRQFQD 105

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+   ++G  T  IGDPS + E+R+ +  +E+  N    +      +     +    +
Sbjct: 106 LGHEVHLIIGDFTGRIGDPSGKSETRKQLSEEEVMANAATYQEQIFKILD----REKTFI 161

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
             N +WL  +K  D+L   G + +V RML  +    R +    +   EF Y ++QAYD V
Sbjct: 162 HFNSSWLMQLKLADVLNLAGKY-TVARMLERDDFSKRYREGLPIGIHEFMYPLMQAYDSV 220

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGA 244
           EL  +    +++GG+DQ  N++ G +L          ALT P+L    G  KM K+L   
Sbjct: 221 ELRAD----VELGGTDQKFNLLVGRNLLREYGQEPQVALTMPILEGTDGVQKMSKSLGNY 276

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKI 301
           I +N+E    Y  +    +I D  +  + + LT +PM++I               +AK  
Sbjct: 277 IGVNEEA---YEMFGKTMSIPDELIARYFELLTRVPMNDIQGLQEDMNSGKLNPRDAKIR 333

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGF 361
           +A EI  + H  EEAEKA       F      + +P I+ S+ EV     L   +     
Sbjct: 334 LAKEIIKIYHNEEEAEKAEEKFRLVFSQRDIPEDIPVITSSEREV----WLPKFLHDNSM 389

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
             ST++ RR +K  A+K+N      E L ++         + L  G++      L 
Sbjct: 390 VNSTSDGRRMIKQGAVKVNGEKYQEENLLLQDT-------MVLQVGRRKFCRLRLS 438


>gi|50289233|ref|XP_447047.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49526356|emb|CAG59980.1| unnamed protein product [Candida glabrata]
          Length = 462

 Score =  371 bits (953), Expect = e-100,   Method: Composition-based stats.
 Identities = 138/440 (31%), Positives = 214/440 (48%), Gaps = 32/440 (7%)

Query: 7   DFLSILSERGFIHQIS-NPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           + L  L +RG + Q+S    +L+     G  V  Y G D TA S+H G+L  LM+L    
Sbjct: 24  NVLRELRDRGLVSQVSAPEEKLEEQLESGQKVKLYCGVDPTAKSIHLGNLVPLMVLLHFY 83

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK-----YGTG 119
             GH  ++L+GG T  +GDPS R   R +M  +    N+  I G    F       Y T 
Sbjct: 84  VRGHDIVTLVGGATGCVGDPSGRTTERSLMEDKTRLSNVSSISGQLEKFFINGLAYYNTK 143

Query: 120 KTD--------ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSF 171
             D         +  NN  W   +K +D L   G    V  ML+ +SV +RL  + SL F
Sbjct: 144 NKDRNETLPGKHIKENNYNWWKDVKMLDFLANYGRHIRVQSMLARDSVTARLNTQNSLGF 203

Query: 172 LEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL--KTPKLFALTSPLL 229
            EF Y ILQAYDF  L K Y   +Q+GG+DQWGNI  GIDL  RL  +T + + +T PLL
Sbjct: 204 NEFTYQILQAYDFFHLNKTYGVSIQVGGNDQWGNITAGIDLISRLSSRTKQAYGVTVPLL 263

Query: 230 TTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK 289
            TASG K GK+   A++++  +++PY+ +Q++ N  D DV  F K  + L + EI+ M K
Sbjct: 264 QTASGEKFGKSAGNAVFIDPSISTPYDIFQFFLNTLDEDVPRFLKTFSFLTIEEIESMTK 323

Query: 290 LQG--KEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQ----HMPTISISK 343
                  +   +K++A EIT M+ G    +KA + +   F      +     +  I + +
Sbjct: 324 RHNEKPHLRLGQKMLAKEITDMLFGVGNGDKAQSISNIIFGTMEDKEMKLSGLELIDMFR 383

Query: 344 D-----EVSRGMGLLTLIVKAGFA-TSTNEARRHLKSNAIKINNSIIS-NEKLQIKLQDF 396
           +     +  RG  L+ L+ +     +S +EARR ++  +I ++ S +   + +       
Sbjct: 384 EARILQQAKRGESLVALVSR--LTHSSKSEARRKIEQGSIYLHTSRVKITKDINDYNDYL 441

Query: 397 DSTGNIKLSFGKKNHIICHL 416
                + L  GK+   +  +
Sbjct: 442 IDDKVLLLRIGKQKCFVIEM 461


>gi|323695192|ref|ZP_08109316.1| tyrosine-tRNA ligase [Clostridium symbiosum WAL-14673]
 gi|323500754|gb|EGB16692.1| tyrosine-tRNA ligase [Clostridium symbiosum WAL-14673]
          Length = 324

 Score =  371 bits (953), Expect = e-100,   Method: Composition-based stats.
 Identities = 136/291 (46%), Positives = 186/291 (63%), Gaps = 6/291 (2%)

Query: 5   KSD--FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
           +S+      L  RG I Q++N  E+  + ++G  T YIG+D TA SLH GH   L L+  
Sbjct: 37  RSNMKIYEELVARGLIAQVTNEEEIGNMINEGKATFYIGFDPTADSLHVGHFMALCLMKR 96

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD 122
           LQ  G+KPI+L+GGGT +IGDPS R++ R+MM  + IQ N +  K   S FI +  GK  
Sbjct: 97  LQMAGNKPIALLGGGTGMIGDPSGRNDLRQMMTVETIQHNCDCFKQQMSRFIDFSEGK-- 154

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
           A+M+NN  WL  + Y++LLRE+G  FSVNRML+ E  + R+  E+ L+FLEFNYMI+Q+Y
Sbjct: 155 AMMVNNAEWLMGLNYVELLREVGPHFSVNRMLAAECYKQRM--EKGLTFLEFNYMIMQSY 212

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DF  L + Y C +Q GG DQW N++ G +L  R       A+T  LL  + G KMGKT S
Sbjct: 213 DFYMLFQKYGCNMQFGGDDQWSNMLGGTELIRRKLGKDAHAMTITLLLNSEGKKMGKTQS 272

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK 293
           GA+WL+   TSP+ F+QYWRNI DADV+   + LT LP+ +I+ M K +  
Sbjct: 273 GAVWLDPNKTSPFEFYQYWRNIADADVLKCLRMLTFLPIEQINEMDKWREA 323


>gi|67919996|ref|ZP_00513516.1| Tyrosyl-tRNA synthetase, class Ib [Crocosphaera watsonii WH 8501]
 gi|67857480|gb|EAM52719.1| Tyrosyl-tRNA synthetase, class Ib [Crocosphaera watsonii WH 8501]
          Length = 409

 Score =  371 bits (953), Expect = e-100,   Method: Composition-based stats.
 Identities = 95/399 (23%), Positives = 176/399 (44%), Gaps = 26/399 (6%)

Query: 23  NPRELDILCSQ--GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSI 80
               L+ L  +    +   +G D T + +H GH      L   Q  GH  + ++G  T+ 
Sbjct: 30  PEENLEKLIEKCHRPLRIKLGIDPTGTDIHLGHSIPFRKLRGFQDAGHTAVVIIGDFTAQ 89

Query: 81  IGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDL 140
           IGDP+ + E R+ + S+ +++N E         + + T      +  N  WL  +     
Sbjct: 90  IGDPTGKSEVRKQLTSEAVRKNAESYLEQLRPILDFETP-GRLEIRYNSEWLSELNLAK- 147

Query: 141 LREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGS 200
           ++E+ +  +V +ML+ E    R K+E  +   EF Y ++Q YD V +  +    +++GG+
Sbjct: 148 IQELLATMTVGQMLAKEGFAERYKQENPIFLHEFLYPLMQGYDSVMIDAD----VELGGT 203

Query: 201 DQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQ 259
           DQ  NI  G DL         F L  P+L    G  KM K+L+  + L ++     + + 
Sbjct: 204 DQKFNIAVGRDLQRHFGKKPQFGLLLPILRGTDGSQKMSKSLNNYVGLKEDEL---SMYS 260

Query: 260 YWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKA 319
                 DA +  + + LT LP+ E+            E++K++A EI +  HG++ A  A
Sbjct: 261 KLEKTPDAIIKEYFELLTNLPLEELPE-------NPRESQKLLALEIVSQFHGKQAAVTA 313

Query: 320 ATAAMECF--DMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAI 377
              A +      +  +  +P   +SK E      L  ++  +G   S+ + RR ++  A+
Sbjct: 314 QKTAEDLVKNKGTGATDAVPEYDLSKVEF--PAKLFYILSASGLCGSSGDGRRQIQGGAV 371

Query: 378 KINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI-ICH 415
           +++   I++  +  +  +  S     L  GKK  I +  
Sbjct: 372 RLDGEKITDVNITFEQSEQLSGK--VLQVGKKKFIKLVK 408


>gi|166362864|ref|YP_001655137.1| tyrosyl-tRNA synthetase [Microcystis aeruginosa NIES-843]
 gi|166085237|dbj|BAF99944.1| tyrosyl tRNA synthetase [Microcystis aeruginosa NIES-843]
          Length = 405

 Score =  371 bits (953), Expect = e-100,   Method: Composition-based stats.
 Identities = 101/396 (25%), Positives = 174/396 (43%), Gaps = 25/396 (6%)

Query: 23  NPRELDILC--SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSI 80
               L  L   +   +   +G D T S +H GH      L   Q  GH  + ++G  T+ 
Sbjct: 27  PRENLTQLLQTTDRPLRIKLGIDPTGSDIHLGHSIPFRKLRAFQDAGHVAVVIIGDFTAR 86

Query: 81  IGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDL 140
           IGDP+ + E R+ + S+E++ N E         + + T      +  N  WL  +    +
Sbjct: 87  IGDPTGKSEVRKQLTSEEVRANAENYLAQLRPILDFNTP-NRLEIRYNSEWLGKLDLSQI 145

Query: 141 LREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGS 200
           L E+ S  +V +ML+ E    R  +E+ +   EF Y ++Q YD V +    +  +++GG+
Sbjct: 146 L-ELLSTMTVGQMLAKEGFSERYDQEKPIFLHEFLYPLMQGYDSVAV----EADVELGGT 200

Query: 201 DQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQ 259
           DQ  NI+ G DL +       F L  P+L    G  KM K+L+  + L +      + + 
Sbjct: 201 DQKFNIVVGRDLQKYFGKTPQFGLLLPILIGTDGSQKMSKSLNNYVGLRESAL---SMYS 257

Query: 260 YWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKA 319
                 DA +  + + LT LP+  +            EA+K +A E+    HG+EEA KA
Sbjct: 258 KLEKTPDALLKDYYELLTNLPLDAM-------ASNPREAQKQLAIEVVAQFHGKEEALKA 310

Query: 320 ATAAMECF--DMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAI 377
              A E      +  +  +P  S++   V+  + L  L+   G   S+ E RR ++  A+
Sbjct: 311 QKTAQEIVLQGNTAAAASVPEFSLAA--VTFPLKLFYLLSATGLCKSSGEGRRQIQGGAV 368

Query: 378 KINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
           +I++  I++     +  +  +     L  GK   I 
Sbjct: 369 RIDSEKITDVDKSFETAEALTGK--VLQVGKNKFIR 402


>gi|255727496|ref|XP_002548674.1| hypothetical protein CTRG_02971 [Candida tropicalis MYA-3404]
 gi|240134598|gb|EER34153.1| hypothetical protein CTRG_02971 [Candida tropicalis MYA-3404]
          Length = 500

 Score =  371 bits (953), Expect = e-100,   Method: Composition-based stats.
 Identities = 125/460 (27%), Positives = 218/460 (47%), Gaps = 48/460 (10%)

Query: 2   PAFKSD--FLSILSERGFIHQISNPR--ELDILCSQGVVTAYIGYDLTASSLHAGHLTQL 57
           P   SD   L  L  R  +  I++    +L    S      Y G D TA SLH G+L  L
Sbjct: 43  PETSSDTSLLEYLQSRHLVESITDDNLYKLTKRDSGQKFKLYCGADPTAESLHLGNLLPL 102

Query: 58  MLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG 117
           M+L   +  G+  + L+GG T ++GDPS R   R  +  +++ +N+ KI+   S+F+  G
Sbjct: 103 MVLLHFRMRGNDVVGLVGGATGLVGDPSGRKTERNPLGGEQVDDNVSKIQNQISTFLSNG 162

Query: 118 ------------TGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR 165
                           +   +NN +W   +K ++ L   G    V+ ML+ +S+ SRL+ 
Sbjct: 163 IEYAKSRQFPMTDSIGETTSVNNASWWADVKMLEFLATYGRHIRVSAMLARDSISSRLES 222

Query: 166 EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL-----KTPK 220
              + F EF Y ILQAYDF  L K+++  +Q+GG+DQWGNI  G+DL  R+     K  +
Sbjct: 223 G-GIGFNEFTYQILQAYDFWHLYKDHNVNMQVGGNDQWGNITAGVDLISRIKKSFGKDKE 281

Query: 221 LFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLP 280
            + +T PLLTTASG K GK+   A++++ ++T+PY  +QY+ N+ D  V +  K  T LP
Sbjct: 282 AYGVTVPLLTTASGEKFGKSAGNAVFIDSKLTTPYQMYQYFINVPDDIVGTLLKVFTLLP 341

Query: 281 MSEID---RMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMEC-------FDMS 330
           ++ I+            +  A++++A E+  ++HG    ++ A             F+ +
Sbjct: 342 LNVIEGELLPKHNSDPGLRIAQRVLAREVVDLIHGVGVGDEMAYITGFLFPTPDQPFNDN 401

Query: 331 IHSQHMPT--------ISISKDEVSRGMGLLTLIVK-AGFATSTNEARRHLKSNAIK--I 379
           + +  +             +K      + L +++ +  G   S +E RR +K+  +   +
Sbjct: 402 VSADKLIENFKRSGILFERTKPAPEEEIKLSSILAEITG--KSKSEMRRLIKAGGVYMGL 459

Query: 380 NNSIISNEKLQI---KLQDFDSTGNIKLSFGKKNHIICHL 416
           + + I +    I             + +  GK+N+ +   
Sbjct: 460 DRNQIEDPDDVILFDVDHHLIDGKLLLVRVGKQNYYVVEF 499


>gi|4680649|gb|AAD27714.1|AF132939_1 CGI-04 protein [Homo sapiens]
          Length = 476

 Score =  371 bits (952), Expect = e-100,   Method: Composition-based stats.
 Identities = 134/431 (31%), Positives = 204/431 (47%), Gaps = 28/431 (6%)

Query: 13  SERGFIHQISNPR----ELDILCSQG----VVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
             RG             EL  L  +G      T Y G+D TA SLH GHL  L+ LF LQ
Sbjct: 42  KARGLFKDFFPETGTKIELPELFDRGTASFPQTIYCGFDPTADSLHVGHLLALLGLFHLQ 101

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI-------EKIKGIFSSFIKYG 117
           + GH  I+L+GG T+ +GDPS R + R  + ++ ++ N        E +          G
Sbjct: 102 RAGHNVIALVGGATAALGDPSGRTKEREALETERVRANARALRLGLEALAANHQQLFTDG 161

Query: 118 TGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYM 177
                  +L+N  W      +D L  +G  F +  +LS +SV+ RLK  + +S  EF Y 
Sbjct: 162 RSWGSFTVLDNSAWYQKQHLVDFLAAVGVHFRMGTLLSRQSVQLRLKSPEGMSLAEFFYQ 221

Query: 178 ILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
           +LQAYDF  L + Y CR+Q+GGSDQ GNI+ G +   +L    +F +T  L+T+ +G K+
Sbjct: 222 VLQAYDFYYLFQRYGCRVQLGGSDQLGNIMSGYEFINKLTGEDVFGITVTLITSTTGAKL 281

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI-- 295
           GK+   A+WLN++ TSP+  +Q++    +  V  + K  T LP+ EID + +L  KE   
Sbjct: 282 GKSAGNAVWLNRDKTSPFELYQFFVRQPEDSVERYLKLFTFLPLPEIDHIMQLHVKEPER 341

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM----------PTISISKDE 345
              +K +A E+T +VHGRE  + A       +  SI +  +               S+  
Sbjct: 342 RGPQKRLAAEVTKLVHGREGLDSAKRCTQALYHSSIDALEVMSDQELKELFKEAPFSEFF 401

Query: 346 VSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEK-LQIKLQDFDSTGNIKL 404
           +  G  +L    KA          R +    + IN+  ++N + + I  Q     G   L
Sbjct: 402 LDPGTSVLDTCRKANAIPDGPRGYRMITEGGVSINHQQVTNPESVLIVGQHILKNGLSLL 461

Query: 405 SFGKKNHIICH 415
             GK+N  I  
Sbjct: 462 KIGKRNFYIIK 472


>gi|118382836|ref|XP_001024574.1| tyrosyl-tRNA synthetase family protein [Tetrahymena thermophila]
 gi|89306341|gb|EAS04329.1| tyrosyl-tRNA synthetase family protein [Tetrahymena thermophila
           SB210]
          Length = 500

 Score =  371 bits (952), Expect = e-100,   Method: Composition-based stats.
 Identities = 122/462 (26%), Positives = 215/462 (46%), Gaps = 55/462 (11%)

Query: 10  SILSERGFIHQISNP-----------------RELDILCSQGVVTAYIGYDLTASSLHAG 52
             L  R  + Q +N                  +    + +Q   +AY G+D TA SLH G
Sbjct: 38  KELQNRELLFQCTNDILTKDTFYQHLIQQYNAQGDKQVNNQKQFSAYAGFDPTADSLHMG 97

Query: 53  HLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSS 112
           +L  ++ +  L   G KPI L+GG T +IGDPS + + R M+  +E+  N++ I+     
Sbjct: 98  NLISILTMIRLSLLGIKPILLVGGATGLIGDPSGKTQERNMLTKEEVLSNVQGIENTLRK 157

Query: 113 ----------------FIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSF 156
                            I Y   K D  ++NN  +   +  +D +R+IG  F +  +L+ 
Sbjct: 158 CTSNIYSFLEKNKQKLEIDYIPAKEDLQIINNYDFYKDMNILDFIRDIGKHFRMGNLLNK 217

Query: 157 ESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL 216
           E++ +RL  E  LS+ EF Y +LQ YDF +L  + +C +Q+GGSDQWGNI  GI+L  R 
Sbjct: 218 ETIANRLNTEDGLSYTEFTYTLLQGYDFEKLFLDKNCIIQVGGSDQWGNITSGIELIRRK 277

Query: 217 KTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRL 276
              +++ +T+ L+ TA G K GK+   A+WL+   T  Y+ +QY  N+ D   +++ K  
Sbjct: 278 HRAEVYGITTNLVLTAQGKKFGKSEGNALWLDPAKTKSYDIFQYLINVPDQLSINYLKMF 337

Query: 277 TTLPMSEIDRMAKLQ--GKEINEAKKIIATEITTMVHGREEAEK--AATAAMECFDMSI- 331
           + LP+ +I+ + K          A+  +A +I  MV G  ++ +  A T A + F     
Sbjct: 338 SFLPLHQIEEIEKKHMEDAGKRLAQNTLAEQIIGMVQGDSQSAEQGAQTTAQKFFTTDFS 397

Query: 332 -----HSQHMPTI--------SISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIK 378
                    +           ++ + ++ +    + +I       +  E +R++++    
Sbjct: 398 KFNEKSESEIIEFFSSFNEKHTVERKDLQKYKNYIDMIGDLKLLKNKAEIKRNIENGGAY 457

Query: 379 INNSII----SNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           INN  I    S+    +  ++  +   +   FGKKN+ +  +
Sbjct: 458 INNKRISLVDSDNLQTLLSENLLANRFLVARFGKKNYYLIEV 499


>gi|260890533|ref|ZP_05901796.1| hypothetical protein GCWU000323_01711 [Leptotrichia hofstadii
           F0254]
 gi|260859775|gb|EEX74275.1| tyrosine--tRNA ligase [Leptotrichia hofstadii F0254]
          Length = 412

 Score =  371 bits (952), Expect = e-100,   Method: Composition-based stats.
 Identities = 104/411 (25%), Positives = 182/411 (44%), Gaps = 32/411 (7%)

Query: 15  RGFIHQISNPRELDILCSQG-----VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
           RG  ++I N  E      +       +   +G D T S LH GH   L  L   Q  GH+
Sbjct: 24  RGC-NEIINENEFKKKLEKSISTNTPLRVKLGIDPTGSELHLGHAVPLRRLKQFQDLGHE 82

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
            + L+G  T  IGDP+ + E+R+M+  +++ ENI+         +          ++ N 
Sbjct: 83  VLFLIGTFTGRIGDPTGKSETRKMLSEEQVSENIKTYLDQVKLILDLD----KIKVVYNA 138

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
            WL  +   D L  + S F+V++M+S E    RL   + +S +EF Y ILQ YD VEL  
Sbjct: 139 DWLEKLSLSDALNLL-SQFTVSQMISREDFSKRLAENKPVSLIEFMYPILQGYDSVELKA 197

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLN 248
           +    +++G ++Q  N++ G DL +     +   +  P+L    G  KM K+L   I + 
Sbjct: 198 D----VELGATEQKFNLLRGRDLQKNFGQEQQVCMIMPILVGLDGVEKMSKSLGNYIGV- 252

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAKKIIATE 305
               +P + +    +I D  + ++   +T +P  +I  +            EAKK +  E
Sbjct: 253 --KDAPNDMFGKVMSISDELMENYYTMITDVPFEKIAEIKAQIADGSLHPMEAKKQLGAE 310

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV-KAGFATS 364
           +  + +G E A++A       F        +P + +   E    + ++ L+V +A     
Sbjct: 311 VVKIYYGEEAAKEARDWFENVFSKRNLDVDLPEVEVPYGE----INVIDLLVKEAKLLGG 366

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           T+EARR +     KIN+  I + K  + ++       + +  GKK  +   
Sbjct: 367 TSEARRLISQGGFKINDEAIKDIKANVNVE-----SGMVIRAGKKKIVKVK 412


>gi|157736895|ref|YP_001489578.1| tyrosyl-tRNA synthetase [Arcobacter butzleri RM4018]
 gi|157698749|gb|ABV66909.1| tyrosyl-tRNA synthetase [Arcobacter butzleri RM4018]
          Length = 402

 Score =  371 bits (952), Expect = e-100,   Method: Composition-based stats.
 Identities = 106/421 (25%), Positives = 189/421 (44%), Gaps = 36/421 (8%)

Query: 8   FLSILSE--RGFIHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLMLL 60
            L  L+E  RG + +I +   ++ L  +            G+D TA  +H GH   +  L
Sbjct: 5   VLEALNEIKRG-VAEIIDFEAIEKLIKRYFETGENFYVKAGFDPTAPDIHLGHTVLIQKL 63

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              QK G     L+G  T+ IGDP+ + E+R+++  +++  N E  K      +     +
Sbjct: 64  ALFQKFGGIVQFLIGDFTATIGDPTGKSETRKVLSREQVLNNAETYKQQVFKILD----E 119

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               ++ N +WL  +    L+  + S  +V RML  +    R      ++  EF Y +LQ
Sbjct: 120 NKTQVVFNSSWLNELGTAGLIA-LASNLTVARMLERDDFSKRYSSNTPIAVSEFLYPLLQ 178

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFA-LTSPLLTTASG-TKMG 238
            YD + L  +    +++GG+DQ  N++ G  L +   + K  A L  P+L    G  KM 
Sbjct: 179 GYDSIALNSD----VELGGTDQKFNLLMGRTLQKAYNSKKQQAVLMMPILEGLDGVQKMS 234

Query: 239 KTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR---MAKLQGKEI 295
           K+L   I +  E   P++ +    +I D  +  + + L++  + EI+      +   K  
Sbjct: 235 KSLGNYIGVTDE---PFDMFGKILSISDELMWRYYELLSSKSLKEIEELKINVENGSKHP 291

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTL 355
            + K+ +A EI    HG    EKA     + F      + +PT  I +    + + +   
Sbjct: 292 KKVKEELAMEIVDRFHGAGFGEKAKDEFEKVFAK----KDIPT-EIEEFHFEKEIWICQA 346

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +V +    ST++ARR +K+NA+ IN   I+++KL ++       G   L  GKK+     
Sbjct: 347 LVDSKLVDSTSQARRDIKANAVSINQEKINDDKLILEK------GEYILQKGKKSFAKIL 400

Query: 416 L 416
           +
Sbjct: 401 I 401


>gi|116515016|ref|YP_802645.1| hypothetical protein BCc_075 [Buchnera aphidicola str. Cc (Cinara
           cedri)]
 gi|116256870|gb|ABJ90552.1| tyrosyl-tRNA synthetase [Buchnera aphidicola str. Cc (Cinara
           cedri)]
          Length = 428

 Score =  371 bits (952), Expect = e-100,   Method: Composition-based stats.
 Identities = 140/427 (32%), Positives = 219/427 (51%), Gaps = 21/427 (4%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           K++ L  L+++ F  +I N  EL+       V  Y G+D T +SLH GHL  ++ L   Q
Sbjct: 4   KTNILDFLNKKNFFSKIFNQFELNNYLKNKNVFLYCGFDPTENSLHIGHLLPIICLKHFQ 63

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK-YGTGKTDA 123
             G+ PI L+GG TSI+GDPSF+   R+      ++ N   ++     F           
Sbjct: 64  NFGYTPIILIGGATSIVGDPSFKIYERKKQSLDLLRFNQICLEKQLLFFFNNQECLNNKV 123

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL-KREQSLSFLEFNYMILQAY 182
           ++LNN +W  +   +  LR+IG +FSVN M+  ESV+ RL K +  +SF EF+Y +LQAY
Sbjct: 124 IILNNYSWFKNFSILSFLRKIGIYFSVNYMIHKESVKKRLIKEKTGMSFTEFSYSLLQAY 183

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DF++L + Y  +LQ+GGSDQWGNI+ GI L ++L    +F  T+ LL  ++G K GKT +
Sbjct: 184 DFLKLYEKYGVKLQIGGSDQWGNILSGIRLIKKLYKDDVFGATNSLLVKSNGEKFGKTET 243

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKK 300
             IWL+ + TSP+ F+Q+W NI D D+ +F +  T +   +I+ +       K I   K 
Sbjct: 244 DTIWLDAKKTSPFKFYQFWVNISDEDIDNFLQWFTFIDEKKINILFHDNNFIKNIINKKI 303

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMS------------IHSQHMPTISISKDEVSR 348
            +A  +T +VHG++            F               +    +P+I  +      
Sbjct: 304 FLAEFLTKLVHGKDVLISVKRIIFFLFGNGSITNIKEEDCIQLLKDGIPSIICNSF---- 359

Query: 349 GMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGK 408
            + L  ++VK     S N+AR  + S AIKIN  + + +       D        +S GK
Sbjct: 360 -LDLPHILVKTLLVNSLNKARNMIISGAIKINGIVQTQKDYNFSKSDLLFNKYTFISKGK 418

Query: 409 KNHIICH 415
           KN+ + +
Sbjct: 419 KNYFLIY 425


>gi|322805525|emb|CBZ03089.1| tyrosyl-tRNA synthetase [Clostridium botulinum H04402 065]
          Length = 400

 Score =  371 bits (952), Expect = e-100,   Method: Composition-based stats.
 Identities = 108/406 (26%), Positives = 184/406 (45%), Gaps = 33/406 (8%)

Query: 18  IHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPIS 72
           + +I N  +L     +       +T  +G D TA  +H GH   L  +  LQ  GH+ + 
Sbjct: 15  VDEIINVEDLKSKLEKSQKTGKPMTVKLGLDPTAPDIHIGHSVVLRKIRQLQDLGHRAVI 74

Query: 73  LMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL 132
           ++G  T  IGDP+ + ++R+ +   E+  N +  +      I             N  WL
Sbjct: 75  IIGDFTGRIGDPTGKSKTRKPLTQDEVMFNAKTYEEQIFKIIDKDKTDLK----FNSEWL 130

Query: 133 CSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYD 192
             +   D + E+ S ++V RML  E  + R +   S+   EF Y +LQA+D V L  +  
Sbjct: 131 GKLSLRDTI-ELTSKYTVARMLEREDFKKRFESHSSIGIHEFFYPLLQAFDSVSLKAD-- 187

Query: 193 CRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEM 251
             +++GG+DQ  N++ G  + +        A+  PLL    G  KM K+L   I +N++ 
Sbjct: 188 --IELGGTDQRFNLLMGRTIQKDFDQESQVAILMPLLEGTDGKDKMSKSLGNYIGINEDA 245

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKIIATEITT 308
               + +    +I D  +V + +  T +   +I ++    + +     + K  +A EI  
Sbjct: 246 N---DIYGKVMSIPDKMIVKYYELATDIHPDKIAKIKARLEEEKVNPRDIKMELAKEIVR 302

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
           + HG E + KA       F      + + TI ++  E      ++ LI+KA FA S NEA
Sbjct: 303 LYHGEEASVKAEVNFKNIFQQGNIPEDIDTIKVNLTE----TNIVDLIIKAKFAPSKNEA 358

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           RR +K  A+KIN   + +E+ ++K +D        L  GKK  I  
Sbjct: 359 RRLVKQGAVKINGEKV-DEECKVKNED-------ILQVGKKKFIKI 396


>gi|312963384|ref|ZP_07777866.1| tyrosyl-tRNA synthetase [Pseudomonas fluorescens WH6]
 gi|311282190|gb|EFQ60789.1| tyrosyl-tRNA synthetase [Pseudomonas fluorescens WH6]
          Length = 399

 Score =  371 bits (952), Expect = e-100,   Method: Composition-based stats.
 Identities = 104/408 (25%), Positives = 171/408 (41%), Gaps = 24/408 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG    +     ++ L     +    G+D TA  LH GH   +  L   Q+ GH+ I
Sbjct: 10  LIKRGAEELLVEAELIEKLKRGQPLRIKAGFDPTAPDLHLGHTVLINKLRQFQELGHQVI 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T +IGDPS +  +R  +  +++ +N E  K      +     +    +  N TW
Sbjct: 70  FLIGDFTGMIGDPSGKSATRPPLTREQVLDNAETYKTQVFKILDPAKTE----VAFNSTW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +  +   D +R + S ++V RML  +    R    Q ++  EF Y ++Q YD V L  + 
Sbjct: 126 MDQMGPADFIR-LTSQYTVARMLERDDFDKRYSTNQPIAIHEFLYPLVQGYDSVALRAD- 183

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G +L           LT PLL    G  KM K+L   + + + 
Sbjct: 184 ---VELGGTDQKFNLLMGRELQRAYGQEAQCILTMPLLEGLDGVKKMSKSLGNYVGIQE- 239

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEITT 308
             +P   +    +I DA +  + + L+   M EI+  R     G    + K  +A EI  
Sbjct: 240 --APGVMYGKLVSIPDALMWRYFELLSFRSMDEINALRADVEAGANPRDVKIKLAEEIVA 297

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
             HG E A  A  AA            +P I ++  E      +L    KAG   ++  A
Sbjct: 298 RFHGEEAAASAHRAAGNRMKDGELPDDLPEIELAAAEAMPIAAVLN---KAGLVKNSAVA 354

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           R  L S  ++I+  ++ +     +L             GKK      L
Sbjct: 355 RDLLGSGGVRIDGEVV-DRTFIYEL-----GATHVCQAGKKAFARITL 396


>gi|159027684|emb|CAO89549.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 405

 Score =  371 bits (952), Expect = e-100,   Method: Composition-based stats.
 Identities = 101/396 (25%), Positives = 169/396 (42%), Gaps = 25/396 (6%)

Query: 23  NPRELDILCS--QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSI 80
               L  L       +   +G D T S +H GH      L   Q  GH  + ++G  T+ 
Sbjct: 27  PRENLTQLLQTIDRPLRIKLGIDPTGSDIHLGHSIPFRKLRAFQDAGHVAVVIIGDFTAR 86

Query: 81  IGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDL 140
           IGDP+ + E R+ + S+E++ N E         + + T      +  N  WL  +    +
Sbjct: 87  IGDPTGKSEVRKQLTSEEVRANAENYLAQLRPILDFNTP-NRLEIRYNSEWLGKLDLSQI 145

Query: 141 LREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGS 200
           L E+ S  +V +ML+ E    R  RE  +   EF Y ++Q YD V +    +  +++GG+
Sbjct: 146 L-ELLSTMTVGQMLAKEGFSERYDRENPIFLHEFLYPLMQGYDSVAV----EADVELGGT 200

Query: 201 DQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQ 259
           DQ  NI  G DL +       F L  P+L    G  KM K+L+  + L +      + + 
Sbjct: 201 DQKFNIAVGRDLQKYFGKKPQFGLLLPILIGTDGSQKMSKSLNNYVGLRESAL---SMYS 257

Query: 260 YWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKA 319
                 DA +  + + LT LP+         +     EA+K +A E+    HG EEA  A
Sbjct: 258 KLEKTPDALLKDYYELLTNLPLD-------ARASNPREAQKQLAIEVVAQFHGTEEAFNA 310

Query: 320 ATAAMECF--DMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAI 377
              A E      +  +  +P  S++   V+  + L  L+   G   S+ E RR ++  A+
Sbjct: 311 QKTAQEIVLQGNTAAAASVPEFSLAA--VTFPLKLFYLLSATGLCKSSGEGRRQIQGGAV 368

Query: 378 KINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
           +I++  I++     +  +  +     L  GK   I 
Sbjct: 369 RIDSEKITDVDKSFETAEALAGK--VLQVGKNKFIR 402


>gi|262374733|ref|ZP_06068005.1| tyrosyl-tRNA synthetase [Acinetobacter junii SH205]
 gi|262310389|gb|EEY91481.1| tyrosyl-tRNA synthetase [Acinetobacter junii SH205]
          Length = 410

 Score =  370 bits (951), Expect = e-100,   Method: Composition-based stats.
 Identities = 101/420 (24%), Positives = 178/420 (42%), Gaps = 28/420 (6%)

Query: 6   SDFL--SI---LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           S+FL       L +RG    IS    L  L     +    G+D TA  LH GH   +  L
Sbjct: 8   SNFLPAEEQLALIQRGTHEIISEEDLLKKLKENRPLRVKAGFDPTAPDLHLGHTVLINKL 67

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GH+   L+G  T++IGDP+ +  +R  +  +++  N +  +      +     K
Sbjct: 68  KTFQDLGHEVTFLIGDYTAMIGDPTGKSATRPPLSKEQVLANAKTYQEQVFKILDPNKTK 127

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N  W       DL+ ++ S  +V+RML  +    R    Q ++  EF Y ++Q
Sbjct: 128 ----VRFNSEWFNQKSAADLI-QLASQQTVSRMLERDDFTKRYNNHQPIAIHEFLYPLVQ 182

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGK 239
            YD + L    +  +++GG+DQ  N++ G  L  R        +T P+L    G  KM K
Sbjct: 183 GYDSIAL----EADVELGGTDQTFNLLMGRTLQGRYGQESQVCITVPILEGLDGVNKMSK 238

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINE 297
           +L   I +     +P   +Q   ++ D+ +  +   L+   + EI         G+   E
Sbjct: 239 SLGNYIGV---FDTPGAMYQKILSMPDSLIERYFDLLSFKSLDEIKVLLEEMAAGRNPQE 295

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K+I+A E+    H  E AE A  +A          +  P ++IS+ E    + + T++ 
Sbjct: 296 IKRILALELVERFHDAEAAENAHKSAGNRITEGEVPEDTPEVTISRAEFGGELFIATILR 355

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            AG   +   A+  +   A+K++ +++ +    +K       G   +  GKK   I  + 
Sbjct: 356 VAGLNPNAASAKDAVGRGAVKVDWNVV-DMSFSVKE-----NGTYIIQSGKK--AIARVT 407


>gi|322785930|gb|EFZ12549.1| hypothetical protein SINV_80157 [Solenopsis invicta]
          Length = 404

 Score =  370 bits (951), Expect = e-100,   Method: Composition-based stats.
 Identities = 129/404 (31%), Positives = 209/404 (51%), Gaps = 24/404 (5%)

Query: 26  ELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPS 85
           E+  L +      Y G+D TA SLH G+L  LM L   Q+ GH+ I+L+GG T +IGDPS
Sbjct: 2   EIVDLLNNSPQCVYAGFDPTADSLHVGNLLVLMNLLHWQRAGHQVIALVGGATGLIGDPS 61

Query: 86  FRDESR----RMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA-----LMLNNETWLCSIK 136
            R   R    R +  + I+   + I+ IF++  +Y     +      +++NN  W  ++ 
Sbjct: 62  HRKSERVEMERYLIEENIKSITKNIETIFNNHQEYFWKNKETALKPLIIVNNLDWYTNVN 121

Query: 137 YIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQ 196
            I+ +R IG +F +  ML   SV+SRL  +  +SF EF Y + QAYD+++L K Y CR Q
Sbjct: 122 VIEFIRSIGKYFRMGTMLGRTSVQSRLNSDTGMSFTEFTYQVFQAYDWLQLMKKYKCRFQ 181

Query: 197 MGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYN 256
           +GGSDQ GNI+ G DL  +    +++ +T PL+T   G K GK+L  A+WL+   +SP+ 
Sbjct: 182 IGGSDQMGNIMSGYDLITKSMRKEVYGITLPLITAEGGKKFGKSLLNAVWLSSTKSSPFQ 241

Query: 257 FWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKKIIATEITTMVHGRE 314
            +QY+    D+DV  F K  T +P+++I+ + K      E   A+K++A ++T +VHG +
Sbjct: 242 LYQYFIRAKDSDVEKFLKLFTFIPLNKIEEIVKSHMNDPERRRAQKLLAEQVTLLVHGED 301

Query: 315 EAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLI-----------VKAGFAT 363
               A  A+   +D SI S  +   ++   +V  G  ++ ++            KA    
Sbjct: 302 GLLAAKRASAALYDKSIESF-VRLNALELTDVFEGATIVDILSEPGITVYELAKKANCFK 360

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQ-DFDSTGNIKLSF 406
           S ++A R + +    +N+  I+N    I       S     L  
Sbjct: 361 SDHDAERIITAGGFYVNHQKITNLNEVIVPGIHILSNNLSLLRV 404


>gi|315636072|ref|ZP_07891329.1| tyrosine--tRNA ligase [Arcobacter butzleri JV22]
 gi|315479641|gb|EFU70317.1| tyrosine--tRNA ligase [Arcobacter butzleri JV22]
          Length = 402

 Score =  370 bits (951), Expect = e-100,   Method: Composition-based stats.
 Identities = 106/421 (25%), Positives = 189/421 (44%), Gaps = 36/421 (8%)

Query: 8   FLSILSE--RGFIHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLMLL 60
            L  L+E  RG + +I +   ++ L  +            G+D TA  +H GH   +  L
Sbjct: 5   VLEALNEIKRG-VAEIIDFEAIEKLIKRYFETGENFYVKAGFDPTAPDIHLGHTVLIQKL 63

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              QK G     L+G  T+ IGDP+ + E+R+++  +++  N E  K      +     +
Sbjct: 64  ALFQKFGGIVQFLIGDFTATIGDPTGKSETRKVLSREQVLNNAETYKQQVFKILD----E 119

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               ++ N +WL  +    L+  + S  +V RML  +    R      ++  EF Y +LQ
Sbjct: 120 NKTQVVFNSSWLNELGTAGLIA-LASNLTVARMLERDDFSKRYSSNTPIAVSEFLYPLLQ 178

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFA-LTSPLLTTASG-TKMG 238
            YD + L  +    +++GG+DQ  N++ G  L +   + K  A L  P+L    G  KM 
Sbjct: 179 GYDSIALNSD----VELGGTDQKFNLLMGRTLQKAYNSKKQQAVLMMPILEGLDGVQKMS 234

Query: 239 KTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR---MAKLQGKEI 295
           K+L   I +  E   P++ +    +I D  +  + + L++  + EI+      +   K  
Sbjct: 235 KSLGNYIGVTDE---PFDMFGKILSISDELMWRYYELLSSKSLKEIEELKINVENGSKHP 291

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTL 355
            + K+ +A EI    HG    EKA     + F      + +PT  I +    + + +   
Sbjct: 292 KKVKEELAMEIVDRFHGTGFGEKAKDEFEKVFAK----KDIPT-EIEEFHFEKEIWICQA 346

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +V +    ST++ARR +K+NA+ IN   I+++KL ++       G   L  GKK+     
Sbjct: 347 LVDSKLVDSTSQARRDIKANAVSINQEKINDDKLILEK------GEYILQKGKKSFAKIL 400

Query: 416 L 416
           +
Sbjct: 401 I 401


>gi|281201032|gb|EFA75246.1| tyrosine-tRNA ligase [Polysphondylium pallidum PN500]
          Length = 480

 Score =  370 bits (951), Expect = e-100,   Method: Composition-based stats.
 Identities = 129/440 (29%), Positives = 211/440 (47%), Gaps = 35/440 (7%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RGFI+Q++N  E  +  +   ++ Y G+D TA SLH G+L  LM+L   ++ 
Sbjct: 45  NVIKTLRSRGFIYQMTNNDEEMVKITNTSISLYAGFDPTADSLHIGNLLTLMVLLHFKRH 104

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHKP++L+GG T++IGDPS +   R  +    ++ N   I     + +      T   ++
Sbjct: 105 GHKPVALLGGATALIGDPSGKSTDRPQLDRSYVENNSSYIN---ENIVDILGKDTT--IV 159

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL---------------KREQSLSF 171
           NN  W  SI  ID  R++G +F V  ML  + V +RL                    +S 
Sbjct: 160 NNIDWNKSISIIDFFRDVGRYFRVGNMLRKDFVHNRLGTLSENGKQLSLNDDDSASGISL 219

Query: 172 LEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT 231
            EF Y + QA DFV L + + C +Q+GGSDQWGNI  G +L ++  +   + +T PLLT 
Sbjct: 220 PEFCYSLFQANDFVHLNQTHQCVIQVGGSDQWGNITDGCELIKKKLSKPAYGITIPLLTN 279

Query: 232 ASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ 291
           + G K+GK+   +IWL+ + TS YNF+QYW  + D DV    K  T LP+ EI  +    
Sbjct: 280 SQGKKLGKSEGNSIWLSSKKTSAYNFYQYWIQVSDQDVEKLLKLFTLLPLEEIQSIVDAH 339

Query: 292 GKEI--NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG 349
            KE      +K IA  +T +VHG    E A       F  +  +    + S     +  G
Sbjct: 340 NKEPHLRLGQKKIAECVTQLVHGDRGLEDAIKTTNLLFGDNKLNLQDHSESKEIGRLLSG 399

Query: 350 MGLLTLIVKAGFAT-------------STNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
           + + T + K+ + +             S N+++  + + ++ +N   + +    ++ +  
Sbjct: 400 VNISTSLSKSEYLSTPISSIFSKVSGLSKNQSKLLINNQSLYLNGEQVKSPAQLLEPECL 459

Query: 397 DSTGNIKLSFGKKNHIICHL 416
                + L  GKK   +   
Sbjct: 460 IDNSFVILRSGKKAFHLIKF 479


>gi|299529505|ref|ZP_07042942.1| tyrosyl-tRNA synthetase [Comamonas testosteroni S44]
 gi|298722368|gb|EFI63288.1| tyrosyl-tRNA synthetase [Comamonas testosteroni S44]
          Length = 410

 Score =  370 bits (950), Expect = e-100,   Method: Composition-based stats.
 Identities = 98/386 (25%), Positives = 170/386 (44%), Gaps = 26/386 (6%)

Query: 35  VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMM 94
            +   +G D TA  +H GH   L  +  LQ  GH+ I L+G  T++IGDPS R+ +R  +
Sbjct: 48  PLRIKLGLDPTAPDIHLGHTVVLNKMRQLQDLGHQVIFLIGDFTTLIGDPSGRNSTRPPL 107

Query: 95  RSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRML 154
            +++I+ N E      +  +     +    +  N  W   +    ++ ++ + ++V RM+
Sbjct: 108 TAEQIKVNAETYYTQAAKVLDPARTE----VRYNSEWCDQLGARGMI-QLSAKYTVARMM 162

Query: 155 SFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
                 +R     S+S  EF Y +LQ YD V L  +    L++GG+DQ  N++ G  L  
Sbjct: 163 ERNDFHTRFTDGSSISLHEFLYPLLQGYDSVALKSD----LELGGTDQKFNLMMGRHLQA 218

Query: 215 RLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFA 273
                +   LT PLL    G  KM K+ +  I + ++  +    +    +I D  +  + 
Sbjct: 219 EYGQEQQCVLTMPLLVGLDGVHKMSKSKNNYIGITEDANT---MFAKVLSISDELMWDWY 275

Query: 274 KRLTTLPMSEID--RMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSI 331
             L+   ++EI   +     G     AK  +A EIT   H  E A+ A    +       
Sbjct: 276 TLLSFKSLAEIAALKAEIEAGGNPKHAKVALAKEITARFHSAEAADAAEQDFINR-SKGG 334

Query: 332 HSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
               +P IS+S       +G+  L+ +A  A ST EA R +    ++++ ++IS+  L++
Sbjct: 335 IPDDIPEISLS----GAPLGIGALVKQANLAASTGEANRLIDGGGVRVDGNVISDRALKL 390

Query: 392 KLQDFDSTGNIKLSFGKKNHIICHLC 417
                   G   L  GK+      L 
Sbjct: 391 DA------GTFVLQVGKRKFARVTLS 410


>gi|153003961|ref|YP_001378286.1| tyrosyl-tRNA synthetase [Anaeromyxobacter sp. Fw109-5]
 gi|152027534|gb|ABS25302.1| tyrosyl-tRNA synthetase [Anaeromyxobacter sp. Fw109-5]
          Length = 416

 Score =  370 bits (950), Expect = e-100,   Method: Composition-based stats.
 Identities = 97/410 (23%), Positives = 172/410 (41%), Gaps = 38/410 (9%)

Query: 24  PRELDILCSQG-----VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGT 78
            ++L     +       +    G+D TA  LH GH   L  +   Q+ GH  I L+G  T
Sbjct: 29  EKDLRARLQKAYDTGVPLRVKAGFDPTAPDLHLGHTVLLSRMRRFQQFGHTVIFLIGDFT 88

Query: 79  SIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYI 138
            +IGDP+ R+ +R  +  ++I +N E  K      +     +    +  N  WL ++ + 
Sbjct: 89  GLIGDPTGRNSTRPPLTPEQIAQNAETYKKQVFKILDPAATE----VRYNSEWLGAMGFA 144

Query: 139 DLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMG 198
           D++R + S ++V RML  +  + R      +S  EF Y + QAYD V L  +    +++G
Sbjct: 145 DVIR-LASRYTVARMLERDDFKKRYTGNVPISVHEFLYPLAQAYDSVALKAD----VELG 199

Query: 199 GSDQWGNIICGIDLGERLKTPKLFALTSPLLTTAS-----------GTKMGKTLSGAIWL 247
            SDQ  N++ G  +    +      LT P+L               G KM K+L   + +
Sbjct: 200 SSDQLFNLLVGRAIMPDYQLTPQIVLTGPILEGLDAKLDPESRRIVGNKMSKSLGNYVGV 259

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
            +   +P   +    ++ D  +  + + L+    +EI   A L+     +AK  +A EI 
Sbjct: 260 AE---APEEQFGKLMSVSDDLMWRYYELLSDRTSAEI---AALRAGHPKDAKIALAKEIV 313

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
           T  HG + A +A     +          +   +++ D     + L  L+  A    S +E
Sbjct: 314 TRFHGADAATRAEEHFAQVHARREVPDEVEERAVALD-GQAALPLARLLADAKVVASGSE 372

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           ARR +    + +N   +S+EK  +        G   +  GK+  +   L 
Sbjct: 373 ARRLIAQGGVSVNGERVSDEKATL------GAGEWLVKVGKRRFVRLKLA 416


>gi|269122410|ref|YP_003310587.1| tyrosyl-tRNA synthetase [Sebaldella termitidis ATCC 33386]
 gi|268616288|gb|ACZ10656.1| tyrosyl-tRNA synthetase [Sebaldella termitidis ATCC 33386]
          Length = 404

 Score =  370 bits (950), Expect = e-100,   Method: Composition-based stats.
 Identities = 111/417 (26%), Positives = 191/417 (45%), Gaps = 33/417 (7%)

Query: 9   LSILSERGFIHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
            +IL  RG   +I N  EL +   +       +   +G D T + LH GH   L  L   
Sbjct: 11  FNILK-RGC-EEIINEAELKLRLEKSLKENKPLKIKLGIDPTGTDLHIGHAVPLRKLKQF 68

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q+ GH    L+G  T+ IGDP+ + E+R+M+  ++IQ+NI         F+   + KT+ 
Sbjct: 69  QELGHTVQFLIGTFTARIGDPTGKSETRKMLTPEDIQKNIATYLEQV--FLILDSEKTE- 125

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            +L N  WL  +   D L  + S F+V +M+S E    RL   + +S +EF Y ILQ YD
Sbjct: 126 -ILYNADWLEKLSLQDFLGLL-SQFTVAQMISREDFAKRLAENKPVSLVEFMYPILQGYD 183

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLS 242
            V +     C +++G ++Q  NI+ G DL +         +  P+L    G  KM K+L+
Sbjct: 184 SVAMK----CDIELGATEQKFNILKGRDLQKNFGMDPQICMLLPILEGLDGVEKMSKSLN 239

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR---MAKLQGKEINEAK 299
             I +     +P + +    +I D  +  + + +T +P+ EI +     +       E K
Sbjct: 240 NYISIT---DTPNDMFGKIMSISDDLMFRYYEIITDIPLEEIAQLKADMENGTLHPMEIK 296

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVK- 358
           K + +E+  + H +EE  KA       F        +P + +   E     G++ ++VK 
Sbjct: 297 KRLGSEVVAIYHNKEEGLKAREWFENVFSKKNLDVELPEVELEYTE----TGVIDILVKH 352

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
               +ST+EARR ++   +KIN+  + +    +  +       + +  GKK  +   
Sbjct: 353 LNLLSSTSEARRLIQQGGLKINDEPVKDINHMVTPE-----AGMIIRAGKKKIVKVK 404


>gi|237752626|ref|ZP_04583106.1| tyrosyl-tRNA synthetase [Helicobacter winghamensis ATCC BAA-430]
 gi|229376115|gb|EEO26206.1| tyrosyl-tRNA synthetase [Helicobacter winghamensis ATCC BAA-430]
          Length = 404

 Score =  370 bits (950), Expect = e-100,   Method: Composition-based stats.
 Identities = 103/411 (25%), Positives = 173/411 (42%), Gaps = 34/411 (8%)

Query: 14  ERGFIHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           ERG + +I     +  L +         T   G+D TA  LH GH   L  L   QK G 
Sbjct: 15  ERG-VQEIIGFDYIKELVTNYFKEGKTYTIKAGFDPTAPDLHLGHTVLLQKLATFQKYGA 73

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           K   L+G  T +IGDPS + E+R+ +  +++ +N +  +      +      +   ++ N
Sbjct: 74  KVFFLIGDFTGMIGDPSGKSETRKPLSKEQVLQNAKTYEEQVYKVLD----ASKMEIVFN 129

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL S+    ++ E+ + FSV RML  +    R K +  +S +EF Y +LQ YD V L 
Sbjct: 130 SNWLDSLGTRGMI-ELAAKFSVARMLERDDFEKRFKAQSPISIVEFFYPLLQGYDSVALN 188

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASGT-KMGKTLSGAIW 246
               C ++ GG+DQ  N++ G  L        +   +  PLL    G  KM K+L   + 
Sbjct: 189 ----CDIEFGGTDQKFNLLMGRHLQRAYGLEKEQSVVMVPLLEGLDGVNKMSKSLGNYVG 244

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAKKIIA 303
           + +E   P   +    +I D+ +  + + L+T  + EI  + +   K        K+ +A
Sbjct: 245 ITQE---PKEMFGRILSISDSLMWRYYELLSTKSLQEIAELKQGVEKGELHPKVVKENLA 301

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
            EI    +    A  A       F        +P  +       +G+ +  L  + G   
Sbjct: 302 LEIIARYYDINAANAAKEEFARVFSKDELPSDIPVFT-----KEKGIWIAQLAQECGLCD 356

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           S +EA R +K  A+K+N   + + KL ++           L  GK+     
Sbjct: 357 SNSEALRAIKQGALKLNGKKVEDSKLNLQES------EYILQIGKRKFAKV 401


>gi|126660180|ref|ZP_01731298.1| tyrosyl-tRNA synthetase [Cyanothece sp. CCY0110]
 gi|126618545|gb|EAZ89296.1| tyrosyl-tRNA synthetase [Cyanothece sp. CCY0110]
          Length = 407

 Score =  369 bits (949), Expect = e-100,   Method: Composition-based stats.
 Identities = 94/395 (23%), Positives = 171/395 (43%), Gaps = 25/395 (6%)

Query: 23  NPRELDILCSQ--GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSI 80
               L+ L  +    +   +G D T + +H GH      L   Q  GH  + ++G  T+ 
Sbjct: 30  PEENLEKLIEKSDRPLRVKLGIDPTGTDIHLGHSIPFRKLRAFQDAGHTAVVIIGDFTAQ 89

Query: 81  IGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDL 140
           IGDP+ + E R+ + S++++ N E         + + T      +  N  WL  +     
Sbjct: 90  IGDPTGKSEVRKQLTSEQVKSNAENYLEQLRPILDFDTP-GRLEIRYNSEWLKELNLAK- 147

Query: 141 LREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGS 200
           ++E+ +  +V +ML+ E    R K+E  +   EF Y ++Q YD V +  +    +++GG+
Sbjct: 148 IQELLATMTVGQMLAKEGFAERYKQENPIFLHEFLYPLMQGYDSVMIDAD----VELGGT 203

Query: 201 DQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQ 259
           DQ  NI  G DL         F L  P+L    G  KM K+L+  + L ++     + + 
Sbjct: 204 DQKFNIAVGRDLQRHFGKKPQFGLLLPILLGTDGSQKMSKSLNNYVGLKEDEL---SMYS 260

Query: 260 YWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKA 319
                 DA +  + + LT LP+ ++            + +K++A EI T  H ++ A  A
Sbjct: 261 KLEKTPDAIIKDYFELLTNLPLDQLPE-------NPRDCQKLLALEIVTQFHSQKAAITA 313

Query: 320 ATAAMECF--DMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAI 377
              A +      +  +  +P   +S  E      L  ++  +G   S+ E RR ++  A+
Sbjct: 314 QKTAEDLVKNKGTGATDAVPEYDLSNVEF--PAKLFYILNASGLCGSSGEGRRQIQGGAV 371

Query: 378 KINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           +++   IS+    I   + +      L  GKK  I
Sbjct: 372 RLDGEKISDVN--ITFDNLEQLSGKVLQVGKKKFI 404


>gi|109947217|ref|YP_664445.1| tyrosyl-tRNA synthetase [Helicobacter acinonychis str. Sheeba]
 gi|109714438|emb|CAJ99446.1| tyrS [Helicobacter acinonychis str. Sheeba]
          Length = 402

 Score =  369 bits (949), Expect = e-100,   Method: Composition-based stats.
 Identities = 97/390 (24%), Positives = 184/390 (47%), Gaps = 28/390 (7%)

Query: 32  SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESR 91
           +        G+D TA  LH GH   +  L  LQ+ G +   L+G  T++IGDP+ ++E+R
Sbjct: 35  TNERFIVKAGFDPTAPDLHLGHTVLIQKLALLQQYGARVKFLIGDFTAMIGDPTGKNETR 94

Query: 92  RMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVN 151
           + +   ++ EN +  +      +     +    +  N TWL S+    ++ E+ + FSV 
Sbjct: 95  KPLNQDQVLENAQTYEEQIYKILD----QKHTEVCFNSTWLDSLGTKGMV-ELCAKFSVA 149

Query: 152 RMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGID 211
           RML  +    R K  + +S +EF Y +LQ YD V +  +    +++GG+DQ  N++ G  
Sbjct: 150 RMLERDDFTKRYKENRPISIVEFLYPLLQGYDSVAMDAD----IELGGNDQKFNLLVGRF 205

Query: 212 LGERLK-TPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADV 269
           L        +   +T PLL    G  KM K+L   + + +E   P   +    ++ D  +
Sbjct: 206 LQRAYGLNKEQSIITMPLLEGLDGVQKMSKSLGNYVGITEE---PNAMFGKLMSVSDDLM 262

Query: 270 VSFAKRLTTLPMSEIDRMAK---LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMEC 326
             +   L+   + EI+ +      Q       K+ +A+EI T  +G ++A KA     + 
Sbjct: 263 WRYYTLLSDKTLEEIEDLKHGILNQTLHPKAVKEDLASEIVTRYYGEDQANKAKEQFSKV 322

Query: 327 FDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISN 386
           F  ++  ++     +S+     G+G+L ++ + GF  ST++ARR ++   ++I+  ++ +
Sbjct: 323 FSANLLPEN-----LSESAFDEGVGILDVLKQIGFCPSTSQARRDIQGGGVRIDQEVVKD 377

Query: 387 EKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           E  +         GN  +  GKK  +  ++
Sbjct: 378 ESYRFVK------GNYVIQLGKKRFMKLNI 401


>gi|117925622|ref|YP_866239.1| tyrosyl-tRNA synthetase [Magnetococcus sp. MC-1]
 gi|117609378|gb|ABK44833.1| tyrosyl-tRNA synthetase [Magnetococcus sp. MC-1]
          Length = 404

 Score =  369 bits (949), Expect = e-100,   Method: Composition-based stats.
 Identities = 97/413 (23%), Positives = 182/413 (44%), Gaps = 27/413 (6%)

Query: 12  LSERGFIHQISNPRELDIL---CSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           + +RG +  +S  +    L    + G  +    G+D TA  LH GH   L  L   Q+ G
Sbjct: 10  IIQRGIVDLVSAEQLEQKLTRSLASGVPLRIKAGFDPTAPDLHLGHTVLLHKLRQFQELG 69

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+ + L+G  T+ IGDP+ + E+R+ +   ++  N E  K      +     +    ++ 
Sbjct: 70  HQVLFLIGDFTAQIGDPTGKSETRKSLTPADVASNAETYKEQVFKLLDAQRTE----VVF 125

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N +W+  ++  D+++ + + F+V RML  +    R K  + ++  EF Y ++Q YD V L
Sbjct: 126 NSSWMGQLRASDMIK-LAAQFTVARMLERDDFSKRYKEGRPIAIHEFLYPLVQGYDSVAL 184

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIW 246
               +  +++GG+DQ  N++ G +L +         +T P+L    G  KM K+L+  I 
Sbjct: 185 ----EADVELGGTDQLFNLLVGRELQKDAGQEPQCVITLPILEGLDGVNKMSKSLNNYIG 240

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGK-EINEAKKIIA 303
           + +        +    +I D  +  + + L+   M++I   R     G+    EAKK +A
Sbjct: 241 VKEPAR---EIFGKCMSISDDLMWRYYELLSDQEMAQITHLRGEVEAGRYHPMEAKKALA 297

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
            E+    HG E A  A       F        +P +++  +     +GL  L+ +AG   
Sbjct: 298 AELVERFHGAEAAVAARAEFEGMFKKGDLPDDVPELTVKAE--GANLGLAALLCQAGLVK 355

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           S  E  R +  NA+ +    +S+ + ++            +  GK+      +
Sbjct: 356 SNGEGMRMISQNAVSVEREKVSDGRYELA-----RGSRSLIQVGKRRFAYVTV 403


>gi|307297746|ref|ZP_07577552.1| tyrosyl-tRNA synthetase [Thermotogales bacterium mesG1.Ag.4.2]
 gi|306917006|gb|EFN47388.1| tyrosyl-tRNA synthetase [Thermotogales bacterium mesG1.Ag.4.2]
          Length = 397

 Score =  369 bits (948), Expect = e-100,   Method: Composition-based stats.
 Identities = 105/411 (25%), Positives = 182/411 (44%), Gaps = 27/411 (6%)

Query: 10  SILSE--RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
             L E  R  +  IS    L  L S+  +   +G D +   LH GH   L  L   QK G
Sbjct: 5   EQLKELSRNHVSLISEEELLRKLKSKRSLRVKLGVDPSRPDLHLGHAVVLRKLRHFQKFG 64

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+ + ++G  T+ IGDPS R ++R M+  +E + N E         +     +    +  
Sbjct: 65  HQVVLIIGDFTARIGDPSGRSKTRPMLSREEAKINAESYSTQAFKILDRELTE----IRF 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL ++ + D++R + S ++V RM+       R +  + +   EF Y + QAYD V +
Sbjct: 121 NSEWLDAMSFEDVIR-LSSKYTVARMMERHDFARRYEENEPIGISEFLYPLAQAYDSVVV 179

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIW 246
             +    +++GG DQ+ N++ G  + E         LT PL+    G  KM K+    I 
Sbjct: 180 KAD----VEIGGDDQFFNLVVGRKIQEEHGLEAQAILTVPLIEGTDGKLKMSKSYDNYIA 235

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLP---MSEIDRMAKLQGKEINEAKKIIA 303
            +    +P + +    +I D   + + + LT      +SEI+   K +     + K  + 
Sbjct: 236 FD---DTPRDMFGKLMSIPDTLTLKYFRLLTDKSEVELSEIETKIKSKSVNPRDLKLELG 292

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
            EIT+  +G E A  A    ++ F        +P I IS    +  + ++ L+V     +
Sbjct: 293 VEITSQFYGEETALNARDEFIKIFRNKELPGEIPEIKIS----TESVSVVDLLVSHANIS 348

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           S +EARR +    +K+N+ ++++    I++ D D      L  GKK     
Sbjct: 349 SRSEARRLIDQGGVKVNDEVLNDIHSVIEISDGD-----VLRIGKKRFYRL 394


>gi|264676689|ref|YP_003276595.1| tyrosyl-tRNA synthetase [Comamonas testosteroni CNB-2]
 gi|262207201|gb|ACY31299.1| tyrosyl-tRNA synthetase [Comamonas testosteroni CNB-2]
          Length = 410

 Score =  369 bits (948), Expect = e-100,   Method: Composition-based stats.
 Identities = 98/386 (25%), Positives = 170/386 (44%), Gaps = 26/386 (6%)

Query: 35  VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMM 94
            +   +G D TA  +H GH   L  +  LQ  GH+ I L+G  T++IGDPS R+ +R  +
Sbjct: 48  PLRIKLGLDPTAPDIHLGHTVVLNKMRQLQDLGHQVIFLIGDFTTLIGDPSGRNSTRPPL 107

Query: 95  RSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRML 154
            +++I+ N E      +  +     +    +  N  W   +    ++ ++ + ++V RM+
Sbjct: 108 TAEQIKVNAETYYTQAAKVLDPARTE----VRYNSEWCDQLGARGMI-QLSAKYTVARMM 162

Query: 155 SFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
                 +R     S+S  EF Y +LQ YD V L  +    L++GG+DQ  N++ G  L  
Sbjct: 163 ERNDFHTRFTDGSSISLHEFLYPLLQGYDSVALKSD----LELGGTDQKFNLMMGRHLQA 218

Query: 215 RLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFA 273
                +   LT PLL    G  KM K+ +  I + ++  +    +    +I D  +  + 
Sbjct: 219 EYGQDQQCVLTMPLLVGLDGVHKMSKSKNNYIGITEDANT---MFAKVLSISDELMWDWY 275

Query: 274 KRLTTLPMSEID--RMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSI 331
             L+   ++EI   +     G     AK  +A EIT   H  E A+ A    +       
Sbjct: 276 TLLSFKSLAEIAALKAEIEAGGNPKHAKVALAKEITARFHSAEAADAAEQDFINR-SKGG 334

Query: 332 HSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
               +P IS+S       +G+  L+ +A  A ST EA R +    ++++ ++IS+  L++
Sbjct: 335 IPDDIPEISLS----GAPLGIGALVKQANLAASTGEANRLIDGGGVRVDGNVISDRALKL 390

Query: 392 KLQDFDSTGNIKLSFGKKNHIICHLC 417
                   G   L  GK+      L 
Sbjct: 391 DA------GTFVLQVGKRKFARVTLS 410


>gi|150020085|ref|YP_001305439.1| tyrosyl-tRNA synthetase [Thermosipho melanesiensis BI429]
 gi|149792606|gb|ABR30054.1| tyrosyl-tRNA synthetase [Thermosipho melanesiensis BI429]
          Length = 398

 Score =  369 bits (948), Expect = e-100,   Method: Composition-based stats.
 Identities = 102/411 (24%), Positives = 178/411 (43%), Gaps = 26/411 (6%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ L IL  R  +  IS    L+ L     +   +G D +   LH GH   L  L   Q 
Sbjct: 4   SNQLEILK-RNVVDFISEEELLERLKENRPLRIKLGVDPSRPDLHLGHAVVLKKLKEFQD 62

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH  I ++G  T +IGDP+ R+ +R M+  +E+++N E         +     ++   +
Sbjct: 63  LGHHVILIIGDFTGMIGDPTGRNITRPMLSEKEVRKNAETYAKQAFKILD----ESKTEV 118

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
             N  WL  +K+ D++R  G + +V RML  +    RL   Q +S  EF Y + QAYD V
Sbjct: 119 RFNNEWLGKMKFADVVRLAGKY-TVARMLERDDFSKRLSEGQPISIAEFLYPLAQAYDSV 177

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGA 244
            +  +    +++GG+DQ  N++ G  + E         +T P++    G  KM K+    
Sbjct: 178 AIKAD----VELGGTDQLFNLLVGRKVQEEYGLKPQIVMTMPIIEGTDGKLKMSKSYDNY 233

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAKKI 301
           I    E   P + +    +I D  +V + + +T +P  EI R  KL  +      + K  
Sbjct: 234 IAFTDE---PNDMYGKVMSIPDELIVKYMRLVTDIPEEEIVRYEKLIKESKVNPRDVKMR 290

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGF 361
           +A EI    +    A++A    ++ F        MP I       +    ++ ++V    
Sbjct: 291 LAREIVKFFYNENAAKEAEENFIKVFRKKELPDEMPEIKFE----NGKYNIVDVLVAVKA 346

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
             S +EA+R +    +K +   + + K  + +++        L  GK+   
Sbjct: 347 TQSRSEAKRVVNQGGVKFDGKKVESFKEDVTIEN-----EHVLRVGKRKFY 392


>gi|188586426|ref|YP_001917971.1| tyrosyl-tRNA synthetase [Natranaerobius thermophilus JW/NM-WN-LF]
 gi|179351113|gb|ACB85383.1| tyrosyl-tRNA synthetase [Natranaerobius thermophilus JW/NM-WN-LF]
          Length = 412

 Score =  369 bits (948), Expect = e-100,   Method: Composition-based stats.
 Identities = 106/408 (25%), Positives = 186/408 (45%), Gaps = 29/408 (7%)

Query: 19  HQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
            +I +  EL     +       +   +G D +A  +H GH   L  L  +Q+ GH    +
Sbjct: 20  EEIISKEELQNKIQKSIDSNEPLRLKLGLDPSAPDIHLGHTVVLRKLKQIQEMGHNVTII 79

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
           +G  T  IGDP+ R E+R+ M ++EI EN E  K      +          +  N  WL 
Sbjct: 80  IGDFTGKIGDPTGRSETRKQMTTEEILENAETYKEQIFKILYSDKTD----VRFNSEWLS 135

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDC 193
           ++K+ D++ E+ S  +V RML  E    R K+ + +S  EF Y I+Q YD V L  +   
Sbjct: 136 NLKFEDII-ELSSKVTVARMLEREDFNWRYKKNRPISLHEFFYPIMQGYDSVFLDSD--- 191

Query: 194 RLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMT 252
            ++ G ++Q  N++ G  L +        AL  P+L    G  KM K+L   I + ++  
Sbjct: 192 -VEFGATEQKFNLLMGRQLQKEKGNTPQIALMLPILVGTDGEKKMSKSLGNYIGIEEK-- 248

Query: 253 SPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIATEITTMV 310
            PY+ +    +I D  ++ +    T L   E+D + K   +GK   + K  +A EI T+ 
Sbjct: 249 -PYDMYGKTMSIPDELIIDYFTLTTDLLPEEVDEIEKALNEGKNPRDIKMKLAREIVTLY 307

Query: 311 HGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV----SRGMGLLTLIVKAGFATSTN 366
           HG+EEAEKA    ++ F      + +P  S+   +        + ++ L+      +S +
Sbjct: 308 HGKEEAEKAEQEFLKVFQQRQLPEDIPEYSLETIKKDMTDEHKIPIVKLLQNCELVSSNS 367

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           E RR +K  A+K+    ++++  ++++          +  GK+     
Sbjct: 368 EGRRMVKQGAVKLEGEKVTDKNAEVEIS-----PGAIIQVGKRKFAKI 410


>gi|28198068|ref|NP_778382.1| tyrosyl-tRNA synthetase [Xylella fastidiosa Temecula1]
 gi|182680696|ref|YP_001828856.1| tyrosyl-tRNA synthetase [Xylella fastidiosa M23]
 gi|81439188|sp|Q87F06|SYY_XYLFT RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|28056128|gb|AAO28031.1| tyrosyl-tRNA synthetase [Xylella fastidiosa Temecula1]
 gi|182630806|gb|ACB91582.1| tyrosyl-tRNA synthetase [Xylella fastidiosa M23]
 gi|307579161|gb|ADN63130.1| tyrosyl-tRNA synthetase [Xylella fastidiosa subsp. fastidiosa
           GB514]
          Length = 418

 Score =  369 bits (948), Expect = e-100,   Method: Composition-based stats.
 Identities = 99/411 (24%), Positives = 174/411 (42%), Gaps = 24/411 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L ERG    +        L S   +    G+D T+  LH GH   L  +   Q  GH+ +
Sbjct: 10  LIERGANEILKFDELERRLRSGRPLRIKAGFDPTSPDLHLGHTVLLNKMRQFQDLGHQVV 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T +IGDP+ ++ +R+ +  +++  N    +      +     +T   +  N  W
Sbjct: 70  FLIGDFTGMIGDPTGKNVTRKPLSREDVLANASTYEDQVFKVLD----RTLTEVRFNSEW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
              +  +D+++      +V RML  +    R   +Q +   EF Y ++Q YD + L  + 
Sbjct: 126 FEKMSAVDMIKLAAQH-TVARMLERDDFAKRFASQQPIVIHEFLYPLIQGYDSIALRAD- 183

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G  L E    P    LT PLL    G  KM K+L   I +   
Sbjct: 184 ---VELGGTDQKFNLLMGRALQEHHGQPPQIVLTMPLLEGLDGVAKMSKSLGNYIGI--- 237

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTT-LPMSEIDRMAKLQGK---EINEAKKIIATEI 306
              P +       I D  +  + + L+  +  +E   + +   K      E K  +A E+
Sbjct: 238 KEPPIDIVTKTMKIGDDLMWRWIELLSFKISAAEAVALREAVAKSELNPREVKLRLAHEL 297

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
            +  +    AEKA            ++  +P   I+    + G+ L+ L+ K+G A S +
Sbjct: 298 VSRFYDNAAAEKAIAGWQAVVTGQGNNNLLPLQKINVP--ADGVRLVALLTKSGLAPSNS 355

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           EA R LK  A++++  ++ +  L      F       +  GK+N I   L 
Sbjct: 356 EAMRKLKERAVRVDGIVVDDAHL-----HFVPGFEGLIQIGKRNFIKVRLV 401


>gi|71275876|ref|ZP_00652159.1| Tyrosyl-tRNA synthetase, class Ib [Xylella fastidiosa Dixon]
 gi|170729376|ref|YP_001774809.1| tyrosyl-tRNA synthetase [Xylella fastidiosa M12]
 gi|71163253|gb|EAO12972.1| Tyrosyl-tRNA synthetase, class Ib [Xylella fastidiosa Dixon]
 gi|167964169|gb|ACA11179.1| Tyrosine--tRNA ligase [Xylella fastidiosa M12]
          Length = 418

 Score =  369 bits (947), Expect = e-100,   Method: Composition-based stats.
 Identities = 98/411 (23%), Positives = 173/411 (42%), Gaps = 24/411 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L ERG    +        L S   +    G+D T+  LH GH   L  +   Q  GH+ +
Sbjct: 10  LIERGANEILKFDELERRLRSGRPLRIKAGFDPTSPDLHLGHTVLLNKMRQFQDLGHQVV 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T +IGDP+ ++ +R+ +  +++  N    +      +     +T   +  N  W
Sbjct: 70  FLIGDFTGMIGDPTGKNVTRKPLSREDVLANASTYEDQVFKVLD----RTLTEVRFNSEW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
              +  +D+++      +V RML  +    R   +  +   EF Y ++Q YD + L  + 
Sbjct: 126 FGKMSAVDMIKLAAQH-TVARMLERDDFAKRFASQHPIVIHEFLYPLIQGYDSIALRAD- 183

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G  L E    P    LT PLL    G  KM K+L   I +   
Sbjct: 184 ---VELGGTDQKFNLLMGRALQEHHGQPPQIVLTMPLLEGLDGVAKMSKSLGNYIGI--- 237

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTT-LPMSEIDRMAKLQGK---EINEAKKIIATEI 306
              P +       I D  +  + + L+  +  +E   + +   K      E K  +A E+
Sbjct: 238 KEPPIDIVTKTMKIGDDLMWRWIELLSFKISAAEAVALREAVAKSELNPREVKLRLAHEL 297

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
            +  +    AEKA            ++  +P   I+    + G+ L+ L+ K+G A S +
Sbjct: 298 VSRFYDNAAAEKAIAGWQAVVTGQGNNNLLPLQKINVP--ADGVRLVALLTKSGLAPSNS 355

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           EA R LK  A++++  ++ +  L      F       +  GK+N I   L 
Sbjct: 356 EAMRKLKERAVRVDGIVVDDAHL-----HFVPGFEGLIQIGKRNFIKVRLV 401


>gi|224372557|ref|YP_002606929.1| tyrosyl-tRNA synthetase [Nautilia profundicola AmH]
 gi|223589484|gb|ACM93220.1| tyrosyl-tRNA synthetase [Nautilia profundicola AmH]
          Length = 417

 Score =  369 bits (947), Expect = e-100,   Method: Composition-based stats.
 Identities = 100/393 (25%), Positives = 171/393 (43%), Gaps = 27/393 (6%)

Query: 28  DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFR 87
             L +    T   G+D TA  LH GH   L  L   QK G     L+G  T+ IGDPS +
Sbjct: 47  KYLQTGERFTIKAGFDPTAPDLHLGHTVLLQKLKTFQKYGATVQFLIGDFTAQIGDPSGK 106

Query: 88  DESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSF 147
             +R+M+   E+ +N E  K      +     + +  ++ N  WL ++     + E+ + 
Sbjct: 107 SATRKMLTPDEVAKNAETYKEQVFKILD----RENTEVVFNSKWLNALGAAG-IVELTTT 161

Query: 148 FSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNII 207
           ++V RML  +    R K +  ++  EF Y +LQ YD V L  +    +++GG+DQ  N++
Sbjct: 162 YTVARMLERDDFEKRFKSQTPIAISEFIYPLLQGYDSVALKSD----IEIGGTDQKFNLL 217

Query: 208 CGIDLGERLK-TPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYWRNID 265
            G  L +      +   +  PLL    G  KM K+L   I + ++   P   +    +I 
Sbjct: 218 MGRQLQKTYNVGKEQSVIMMPLLVGLDGINKMSKSLGNYIGITED---PNTIFAKVLSIS 274

Query: 266 DADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAATAA 323
           D  +  + + L+   + EI+ + +   +G     AK+ +A EI    HG     KA    
Sbjct: 275 DELMWDWYELLSEKSLKEIEELKQKVKEGMNPKIAKEALAIEIVDRFHGEGAGIKAKEHF 334

Query: 324 MECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSI 383
            +          +P   + +        ++  +V    A+S +EARRH+K  A++IN   
Sbjct: 335 DKVHKQGQIPDDIPEFELDE------QNIVDALVNTKLASSKSEARRHIKGGAVRINQEK 388

Query: 384 ISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           I ++ L +K     S     L  GK+      +
Sbjct: 389 IDDQNLILK-----SGEEYILQIGKRKFAKVKV 416


>gi|148654018|ref|YP_001281111.1| tyrosyl-tRNA synthetase [Psychrobacter sp. PRwf-1]
 gi|148573102|gb|ABQ95161.1| tyrosyl-tRNA synthetase [Psychrobacter sp. PRwf-1]
          Length = 414

 Score =  369 bits (947), Expect = e-100,   Method: Composition-based stats.
 Identities = 95/406 (23%), Positives = 176/406 (43%), Gaps = 21/406 (5%)

Query: 15  RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLM 74
           RG     S    +  L     +    G+D TA  LH GH   +  L   Q  GH+   L+
Sbjct: 27  RGTHEIFSEEDLVAKLKLGRPLKIKAGFDPTAPDLHLGHTVLINKLKHFQDLGHEIYFLI 86

Query: 75  GGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCS 134
           G  T+ IGDPS ++ +R  +  +++  N +         +     K    ++ N  W   
Sbjct: 87  GDYTAKIGDPSGKNTTRPPLTDEQVMANAKTYAEQVFKILD----KEKTNVVFNSQWFND 142

Query: 135 IKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCR 194
           +   D++ ++ S  +V+RML  +    R   +  ++  EF Y ++Q YD + L    +  
Sbjct: 143 MSAGDMI-QLASQLTVSRMLERDDFAKRYASQTPIAIHEFLYPLVQGYDSIAL----EAD 197

Query: 195 LQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTS 253
           ++MGG+DQ  N++ G  L  R        +T P+L    G  KM K+L   + +     +
Sbjct: 198 VEMGGTDQTFNLLMGRTLQGRYGHEAQVCITVPILEGLDGVNKMSKSLGNYVGIE---DA 254

Query: 254 PYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIATEITTMVH 311
           P   +Q   ++ D+ +  + + L+  PMSE+D +      G+   E K+I+A E+    H
Sbjct: 255 PGTMYQKILSMPDSLIHRYFEFLSFKPMSEVDALMAEMAAGRNPQEIKRILAEELIERFH 314

Query: 312 GREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRH 371
           G E A  A  +A            +P +++  +     + +  ++ +A  A ++  A+  
Sbjct: 315 GAEAAANAHKSAGNVLADGELPVDLPEVTLELEAGQEALFITQILNQADLAKNSAAAKDM 374

Query: 372 LKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           LK NA+K++   + N    +      S  ++ +  GKK      + 
Sbjct: 375 LKRNAVKVDGEEV-NAGFSLT-----SGQSVVIQAGKKAFAKVTIA 414


>gi|296114084|ref|YP_003628022.1| tyrosyl-tRNA synthetase [Moraxella catarrhalis RH4]
 gi|295921778|gb|ADG62129.1| tyrosyl-tRNA synthetase [Moraxella catarrhalis RH4]
 gi|326560668|gb|EGE11036.1| tyrosyl-tRNA synthetase [Moraxella catarrhalis 46P47B1]
 gi|326562349|gb|EGE12675.1| tyrosyl-tRNA synthetase [Moraxella catarrhalis 103P14B1]
 gi|326563125|gb|EGE13398.1| tyrosyl-tRNA synthetase [Moraxella catarrhalis 12P80B1]
 gi|326567854|gb|EGE17956.1| tyrosyl-tRNA synthetase [Moraxella catarrhalis BC7]
 gi|326569065|gb|EGE19134.1| tyrosyl-tRNA synthetase [Moraxella catarrhalis BC1]
 gi|326571757|gb|EGE21770.1| tyrosyl-tRNA synthetase [Moraxella catarrhalis BC8]
 gi|326573593|gb|EGE23554.1| tyrosyl-tRNA synthetase [Moraxella catarrhalis O35E]
 gi|326574328|gb|EGE24271.1| tyrosyl-tRNA synthetase [Moraxella catarrhalis CO72]
 gi|326575552|gb|EGE25477.1| tyrosyl-tRNA synthetase [Moraxella catarrhalis 101P30B1]
          Length = 406

 Score =  369 bits (947), Expect = e-100,   Method: Composition-based stats.
 Identities = 101/417 (24%), Positives = 183/417 (43%), Gaps = 27/417 (6%)

Query: 6   SDFLSI-----LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           SDFL I     L  RG     S    +  L     +   +G D TA+ LH GH   L  L
Sbjct: 2   SDFLPIKDQLTLIMRGVQEIYSKEDLIKKLEKNRPLRIKLGMDPTAADLHLGHTVVLNKL 61

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GH+ + L+G  T+ IGDPS R+ +R  +   E++ N +         +     K
Sbjct: 62  RHFQDLGHEVLFLIGDYTARIGDPSGRNATRPPLTEAEVKANAQTYAKQVFKILDKDKTK 121

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               ++ N  W   +   D++ ++ S  +V+RML  +    R   +  ++  EF Y ++Q
Sbjct: 122 ----IVFNSDWFGKMSAGDMI-QLASQITVSRMLERDDFSKRYNSQTPIAIHEFLYPLVQ 176

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGK 239
            YD + L  +    +++GG+DQ  N++ G  L  R        +T P+L    G  KM K
Sbjct: 177 GYDSIALDAD----VELGGTDQTFNLLMGRTLQGRYDKEPQVCITMPILEGLDGVQKMSK 232

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINE 297
           +L   I +N         +Q   ++ D  +  + + L+  PMSE++        G+   E
Sbjct: 233 SLGNYIGINDPAGV---MYQKILSMPDTLIARYFELLSFKPMSEVNALLDDMKNGRNPQE 289

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K+I+A E+    H +E A+ A  +A            +P +S+S +     + +  ++ 
Sbjct: 290 IKRILALELIERFHDKESADNAHKSAGNRLADGELPVDLPEVSLSLN-GQDKLFITQVLN 348

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +AG A ++ +A+  L   A+K++  ++ +    ++         + +  GKK +   
Sbjct: 349 QAGLAKNSAQAKDMLSRGAVKVDGQVV-DGSFALE-----QGQTVVIQAGKKAYARV 399


>gi|34556682|ref|NP_906497.1| tyrosyl-tRNA synthetase [Wolinella succinogenes DSM 1740]
 gi|81833185|sp|Q7MAH6|SYY_WOLSU RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|34482396|emb|CAE09397.1| TYROSYL-TRNA SYNTHETASE [Wolinella succinogenes]
          Length = 406

 Score =  369 bits (947), Expect = e-100,   Method: Composition-based stats.
 Identities = 94/388 (24%), Positives = 174/388 (44%), Gaps = 28/388 (7%)

Query: 32  SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESR 91
           S    +   G+D TA  LH GH   +  +   QK G     L+G  T++IGDP+ + E+R
Sbjct: 39  SGETFSIKAGFDPTAPDLHLGHTVLIQKMATFQKHGAIVTFLIGDYTAMIGDPTGKSETR 98

Query: 92  RMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVN 151
           + +  +++ +N +  +      +         ++  N  WL  +    ++ E+ + FSV 
Sbjct: 99  KPLTREQVLQNAQSYQDQVFKILD----PQKTVIRFNSEWLEKLGTAGMI-ELTAKFSVA 153

Query: 152 RMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGID 211
           RML  +    R K +  +S +EF Y +LQ YD V L  +    ++ GG+DQ  N++ G  
Sbjct: 154 RMLERDDFEKRYKSQTPISLVEFIYPLLQGYDSVALESD----VEFGGTDQKFNLLMGRH 209

Query: 212 LGERLK-TPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADV 269
           L        +   L  P+L    G  KM K+L   I + +E   P   +    ++ D  +
Sbjct: 210 LQRSYGLKKEQSVLMVPILEGLDGVQKMSKSLGNYIGVTEE---PNTMYAKVLSVSDELM 266

Query: 270 VSFAKRLTTLPMSEID---RMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMEC 326
             + + L+   + EI       K       +AK+ +A EITT  H  ++A +A     + 
Sbjct: 267 WRYYELLSAKSLDEIHKLQEDVKSGNYHPKKAKEDLALEITTRYHSEQDALQAKEEFDKV 326

Query: 327 FDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISN 386
           F        MP + ++ +     + +   +V+ G + ST++ARR +++ ++KIN + + +
Sbjct: 327 FARDEIPSEMPELGVTGE-----IWICKAMVEGGISPSTSQARRDIQAGSVKINQTKVED 381

Query: 387 EKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
              Q+        G   +  GK+  +  
Sbjct: 382 INQQL------GHGEHIIQVGKRKFLRL 403


>gi|57167617|ref|ZP_00366757.1| tyrosyl-tRNA synthetase [Campylobacter coli RM2228]
 gi|57020739|gb|EAL57403.1| tyrosyl-tRNA synthetase [Campylobacter coli RM2228]
          Length = 401

 Score =  369 bits (947), Expect = e-100,   Method: Composition-based stats.
 Identities = 108/421 (25%), Positives = 180/421 (42%), Gaps = 35/421 (8%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLMLL 60
            + L+ +  RG   +I +   ++ L               G+D TA  LH GH   L  +
Sbjct: 4   KNILAEIK-RGC-AEIIDEERIENLIKNYYEKGENFFVKAGFDPTAPDLHLGHSVVLTKM 61

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            +LQK G     L+G  T  IGDPS +  +R+ +  +++ +N +  +      +     +
Sbjct: 62  AYLQKHGAIVQFLIGDFTGQIGDPSGKSVTRKKLDKEQVLQNAKTYEEQVFKILDPQKTQ 121

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
                  N  WL  +     + E+ S FSV RML  +    R K +  +S  EF Y +LQ
Sbjct: 122 LK----FNSQWLNELGATG-IVELTSTFSVARMLERDDFTKRFKEQSPISICEFLYPLLQ 176

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASGT-KMG 238
            YD V L     C ++MGG+DQ  N++ G  L        +   +  PLL    G  KM 
Sbjct: 177 GYDSVALK----CDIEMGGTDQKFNLLMGRTLQRIYNIGKEQVVMMMPLLEGLDGVNKMS 232

Query: 239 KTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL---QGKEI 295
           K+L   I + ++     + +    +I D  +  + + L+T  + EI+ M K         
Sbjct: 233 KSLGNYIGVTEKAN---DMYAKILSISDELMWRYYELLSTKSLEEIENMKKEISSGNLHP 289

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTL 355
             AK+ +A EITT  H  E A+ A          +     +    I  +     + L   
Sbjct: 290 KLAKENLALEITTRFHNEESAKAAKAEFDSVHSGNALPSDIKEFKIEGE-----IWLAKA 344

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +V+ G   ST+ ARR + +NA+ +N+  +S+E++Q+       TG   L  GK+      
Sbjct: 345 LVECGLENSTSAARRSINANAVSVNSQKVSDEQMQL------GTGEYILQVGKRKFAKLK 398

Query: 416 L 416
           +
Sbjct: 399 V 399


>gi|152993327|ref|YP_001359048.1| tyrosyl-tRNA synthetase [Sulfurovum sp. NBC37-1]
 gi|151425188|dbj|BAF72691.1| tyrosyl-tRNA synthetase [Sulfurovum sp. NBC37-1]
          Length = 399

 Score =  369 bits (947), Expect = e-100,   Method: Composition-based stats.
 Identities = 110/418 (26%), Positives = 196/418 (46%), Gaps = 35/418 (8%)

Query: 9   LSILSERGFIHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           L  +S RG   ++ +   ++ L S+        T   G+D T + LH GH   L  L   
Sbjct: 6   LEEIS-RGT-AEVIDMERIEKLVSKYYEDGTTYTVKAGFDPTGADLHLGHTVLLQKLRAF 63

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           QK G +   L+G  T++IGDP+ + E+R+++    I EN +  +    + +     K+  
Sbjct: 64  QKHGGRVQLLIGDFTAMIGDPTGKSETRKVLDRTTILENAQTYQDQVFNILD----KSKT 119

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            ++ N +WL ++    ++  + + F+V RML  +    R K  +S+S  EF Y +LQ YD
Sbjct: 120 DVVFNSSWLEALGAAGMV-SLTTTFNVARMLERDDFEKRYKSGKSISISEFIYPLLQGYD 178

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASG-TKMGKTL 241
            VEL  +    +++GG+DQ  N++ G  L    +   +   L  P+L    G  KM K+L
Sbjct: 179 SVELQSD----IEIGGTDQKFNLLMGRFLQRAYEIDKEQAVLMMPILEGLDGVQKMSKSL 234

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEA 298
           +  I + +   +P + +    ++ D  +  + + L+   + EI +M +   K       A
Sbjct: 235 NNYIGITE---APKDIYAKTLSVSDELMWRYYELLSERSLEEITQMKQDVEKGALHPKIA 291

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVK 358
           K+ +A E+ T  +  E A+ A       F  +     M  +     EV  G+ +   +V 
Sbjct: 292 KENLALELVTRFYNEELAKLAKEEFDNVFKANQLPSDMKEV-----EVEEGIWICKALVD 346

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           AG   ST++ARR +K  A++I+   IS+EK+ ++      TG   L  GK+      +
Sbjct: 347 AGIEPSTSQARRDIKQGAVRIDQEKISDEKMNLE------TGEYILQVGKRKFAKVKV 398


>gi|305433122|ref|ZP_07402278.1| tyrosine--tRNA ligase [Campylobacter coli JV20]
 gi|304443823|gb|EFM36480.1| tyrosine--tRNA ligase [Campylobacter coli JV20]
          Length = 401

 Score =  368 bits (946), Expect = e-100,   Method: Composition-based stats.
 Identities = 108/421 (25%), Positives = 180/421 (42%), Gaps = 35/421 (8%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLMLL 60
            + L+ +  RG   +I +   ++ L               G+D TA  LH GH   L  +
Sbjct: 4   KNILAEIK-RGC-AEIIDEERIENLIKNYYEKGENFFVKAGFDPTAPDLHLGHSVVLTKM 61

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            +LQK G     L+G  T  IGDPS +  +R+ +  +++ +N +  +      +     +
Sbjct: 62  AYLQKHGAIVQFLIGDFTGQIGDPSGKSVTRKKLDKEQVLQNAKTYEEQVFKILDPQKTQ 121

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
                  N  WL  +     + E+ S FSV RML  +    R K +  +S  EF Y +LQ
Sbjct: 122 LK----FNSQWLNELGATG-IVELTSTFSVARMLERDDFTKRFKEQSPISICEFLYPLLQ 176

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASGT-KMG 238
            YD V L     C ++MGG+DQ  N++ G  L        +   +  PLL    G  KM 
Sbjct: 177 GYDSVALK----CDIEMGGTDQKFNLLMGRTLQRIYNIGKEQAVMMMPLLEGLDGVNKMS 232

Query: 239 KTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL---QGKEI 295
           K+L   I + ++     + +    +I D  +  + + L+T  + EI+ M K         
Sbjct: 233 KSLGNYIGVTEKAN---DMYAKILSISDELMWRYYELLSTKSLEEIENMKKEISSGNLHP 289

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTL 355
             AK+ +A EITT  H  E A+ A          +     +    I  +     + L   
Sbjct: 290 KLAKENLALEITTRFHNEESAKAAKAEFDSVHSGNALPSDIKEFEIEGE-----IWLAKA 344

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +V+ G   ST+ ARR + +NA+ +N+  +S+E++Q+       TG   L  GK+      
Sbjct: 345 LVECGLENSTSAARRSINANAVSVNSQKVSDEQMQL------GTGEYILQVGKRKFAKLK 398

Query: 416 L 416
           +
Sbjct: 399 V 399


>gi|193216002|ref|YP_001997201.1| tyrosyl-tRNA synthetase [Chloroherpeton thalassium ATCC 35110]
 gi|193089479|gb|ACF14754.1| tyrosyl-tRNA synthetase [Chloroherpeton thalassium ATCC 35110]
          Length = 402

 Score =  368 bits (946), Expect = e-100,   Method: Composition-based stats.
 Identities = 97/409 (23%), Positives = 173/409 (42%), Gaps = 25/409 (6%)

Query: 11  ILSERGFIHQISNPRELDI----LCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
            L  +  +  IS     +     L +Q  +   +G D +   LH GH   L  L   Q  
Sbjct: 11  DLISKNTVEIISTTELEEKIQHSLKTQTPLKVKLGADPSRPDLHIGHAVVLKKLRDFQDL 70

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH  I L+G  T+ IGDPS + ++R  +  +E + N +      +  +         ++ 
Sbjct: 71  GHTAILLIGDFTAQIGDPSGKSKTRPQLTHEETRINGQSYFEQAAKILD----TEKTIIT 126

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           +N  WL ++ + D++R + S ++V RML  +    R K+ + ++  EF Y + QA D V 
Sbjct: 127 HNADWLGTMTFADVIR-LTSHYTVARMLERDDFEKRYKQGEPIAIHEFLYPLAQAMDSVH 185

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAI 245
           L  +    +++GG+DQ  N++ G DL           +T P+L    G  KM K+L  AI
Sbjct: 186 LQND----VELGGTDQKFNLLVGRDLQREYGQAPQVCITLPILEGTDGVQKMSKSLGNAI 241

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
                  SP + +    +I D  + ++ K  T     +++       +   +AK+ +A E
Sbjct: 242 SFT---DSPADMFGRVLSIPDILIENYFKLATRFSDEKLEEALLEAKENPRDAKRRLARE 298

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           I  + H   +A+KA       F        +  + +     +    L+  +V  G   S 
Sbjct: 299 IVAIYHSETDAQKAQDDFDRIFIRKEAPSDVTEVHLE----AGAHSLIDALVIIGATASK 354

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            EARR +    + I+N  I + K Q+ + +        +  GK+     
Sbjct: 355 GEARRLMTQGGVSIDNEKIEDAKYQLTVSNEAK----LVKVGKRKFYKV 399


>gi|296331495|ref|ZP_06873967.1| tyrosyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305676482|ref|YP_003868154.1| tyrosyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str.
           W23]
 gi|296151610|gb|EFG92487.1| tyrosyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305414726|gb|ADM39845.1| tyrosyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str.
           W23]
          Length = 412

 Score =  368 bits (946), Expect = e-100,   Method: Composition-based stats.
 Identities = 93/406 (22%), Positives = 179/406 (44%), Gaps = 29/406 (7%)

Query: 19  HQISNPRELDILCSQG-----VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           H++  P EL     +       +   +G D +A  +H GH   L  L   Q+ GH    L
Sbjct: 27  HEVIPPEELRAKLVKSISTGTPLKIKLGLDPSAPDVHLGHTVVLNKLRQFQENGHIVQLL 86

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
           +G  T  IGDP+ +  +R+ +  +E+Q N +     F   +     +    +  N  WL 
Sbjct: 87  IGDFTGKIGDPTGKSAARKQLTDEEVQHNAKTYFQQFGKVLD----QEKVELHYNSKWLK 142

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDC 193
           ++   D++ ++    +V R++  +    R+  ++ +S  EF Y ++Q YD V L  +   
Sbjct: 143 TLNLEDVI-DLAGKITVARLMERDDFEERIAMQKPISLHEFFYPLMQGYDSVVLESD--- 198

Query: 194 RLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMT 252
            +++GG+DQ  N++ G    ER    K   +  PLL    G  KM K+    I +++   
Sbjct: 199 -IELGGTDQHFNVLMGRHFQERYNKEKQVVILMPLLEGLDGVEKMSKSKHNYIGIDE--- 254

Query: 253 SPYNFWQYWRNIDDADVVSFAKRLTTLPMSE---IDRMAKLQGKEINEAKKIIATEITTM 309
            P + +    ++ D+ +  +    T L + E   + +  +       +AK ++A  I  M
Sbjct: 255 HPNDMYGKTMSLPDSLMKKYIHLATDLELEEKKQLVKDLETGAVHPRDAKMLLAKTIVRM 314

Query: 310 VHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEAR 369
            HG E AE A  +    F  +   + +P ++       + M ++ ++VK    +S +EAR
Sbjct: 315 YHGAEAAETAEHSFKTVFQENSLPEDIPAVNWKG---EKKMAIIDMLVKLELLSSKSEAR 371

Query: 370 RHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           R +++  ++IN   I++        D     N+ +  GK+  +   
Sbjct: 372 RMIQNGGVRINGEKITDIHA-----DAVIKENMIIQVGKRKFLKLQ 412


>gi|289432488|ref|YP_003462361.1| tyrosyl-tRNA synthetase [Dehalococcoides sp. GT]
 gi|288946208|gb|ADC73905.1| tyrosyl-tRNA synthetase [Dehalococcoides sp. GT]
          Length = 396

 Score =  368 bits (945), Expect = e-100,   Method: Composition-based stats.
 Identities = 102/415 (24%), Positives = 184/415 (44%), Gaps = 27/415 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M   +     IL  RG    I       +L S   +    G+D ++  +H GH+  L  L
Sbjct: 1   MNQSEKQIDQILK-RGVAEVIVEEDFKKLLLSGRKLRLKEGFDPSSPDIHLGHMVALRKL 59

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             LQ  GH+ + ++G  T+ IGDPS    +R M+ +++++ N +     F   +     +
Sbjct: 60  RQLQDLGHQVVLIVGDWTAQIGDPSGASVTRPMLSAEQVKANAKTYLEQFFKIVDKDKTE 119

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
                     W  + K  D++R + S F+V +ML+ +    R    + +S  E  Y +LQ
Sbjct: 120 VRWQ----SEWYGNFKLEDVVR-LSSKFTVAQMLARDDFAKRYAAGKPISVTELLYPMLQ 174

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGK 239
           AYD V +  +    ++ GG+DQ  N++ G +L E +       L  P+L    G  KM K
Sbjct: 175 AYDSVMVKSD----VEFGGTDQKFNLLVGRELQEMVGQKPQQVLMVPILVGTDGVHKMSK 230

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EIN 296
           +L   I + ++   P + +    +I D  ++ + + +T +P  EI               
Sbjct: 231 SLGNYIGVAED---PSDIFGKCMSIPDELILQYFELVTDIPDQEIADFKAQMENGQVNPM 287

Query: 297 EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLI 356
             KK +A+E+ T ++    A++A              + MP   +   E  +  G++  I
Sbjct: 288 ILKKRLASELITQLYNATAAQEADARFTRVVQRGEIPEDMPECRL---ENGQNTGVIDFI 344

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           + +G A S +EARR L+  A++IN+  IS++   +K  D        +  GK+ +
Sbjct: 345 ILSGLAKSKSEARRLLEQGAVEINSEKISDQNTPVKCGD-------IIKAGKRRY 392


>gi|145220013|ref|YP_001130722.1| tyrosyl-tRNA synthetase [Prosthecochloris vibrioformis DSM 265]
 gi|145206177|gb|ABP37220.1| tyrosyl-tRNA synthetase [Chlorobium phaeovibrioides DSM 265]
          Length = 405

 Score =  368 bits (945), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 103/410 (25%), Positives = 184/410 (44%), Gaps = 26/410 (6%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           ++ + I++E+    +IS+      L ++  +   +G D +   LH GH   L  L   Q 
Sbjct: 15  ANTVEIITEKELEAKISH-----SLKTRTPLKVKLGADPSRPDLHLGHSVVLRKLRDFQD 69

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+ I ++G  T++IGDPS + ++R  + ++E + N E      S  +          +
Sbjct: 70  LGHEAILIIGDFTAMIGDPSGKSKTRPQLTAEEARRNGESYFEQASKILD----PKKTTI 125

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
             N  WL ++ + D++R + S  +V RML  +    R +  + +S  EF Y + QA D V
Sbjct: 126 CWNSDWLGAMTFADVIR-LSSHCTVARMLERDDFERRYRSGEPISIHEFLYPLAQAMDSV 184

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGA 244
            L  +    +++GG+DQ  N++ G DL           +T PLL    G  KM K+L  A
Sbjct: 185 HLKND----IELGGTDQKFNLLVGRDLQREYGIAPQVCITMPLLVGTGGVEKMSKSLGNA 240

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           I  N     P + +    +I D  + ++   L     ++I  + +    +   AK+++A 
Sbjct: 241 ICFN---DPPTDMYGRMLSIPDTLITNYCSLLLPPGTADIGSITEESATDPRSAKRMLAR 297

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
            I  + +  E AE+A +     F      +++    +S  E    + ++ L+V+ G A+S
Sbjct: 298 NIVALYYSPEAAEEAQSHFDRVFVQKKAPENIELFELSHSE----ITVVDLLVELGAASS 353

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
             +ARR ++  AI I+   I      I L     T    L  GK+     
Sbjct: 354 KTDARRMIQQKAILIDEERIEEINASITLSIEPKT----LRAGKRKFFRI 399


>gi|295105726|emb|CBL03269.1| tyrosyl-tRNA synthetase [Gordonibacter pamelaeae 7-10-1-b]
          Length = 403

 Score =  368 bits (945), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 105/402 (26%), Positives = 170/402 (42%), Gaps = 21/402 (5%)

Query: 19  HQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGG 77
            QI     L     +G  +   +G D TA  +H GH   L  L   Q  GH    ++G G
Sbjct: 16  AQIVPESALLEKLKRGKPLNIKLGVDPTAPDIHLGHAVPLRKLRQFQDLGHGVTLIIGDG 75

Query: 78  TSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKY 137
           T++IGDPS R+ +R  + S++I+ N +         +          +  N  WL S+  
Sbjct: 76  TALIGDPSGRNSTRPQLTSEQIKANAQTYVDQAFKILD----PEKTTLRYNSEWLLSLNM 131

Query: 138 IDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQM 197
             LL+ + S F+V R+L  +   +R    Q +S  EF Y ++QAYD V +    +  +++
Sbjct: 132 EGLLK-LASNFTVARILERDDFHNRYTNSQPISLHEFLYPLMQAYDSVVI----EADVEL 186

Query: 198 GGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYN 256
           GG+DQ  N++ G +L E++       LT PLL    G  KM K+    I L  E   P +
Sbjct: 187 GGTDQLFNLLAGRELMEKMGMEPQVCLTLPLLEGTDGVQKMSKSYGNYIGLTDE---PAD 243

Query: 257 FWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK---LQGKEINEAKKIIATEITTMVHGR 313
            +    +I D  +V + +  + LP+ EID + +         N+ K+ +A  I    +  
Sbjct: 244 MFGKVMSIPDELMVKYYRLASALPVDEIDEIERGLAADELHPNKVKRALAQNIVAAYYDE 303

Query: 314 EEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTNEARRHL 372
             A+ A       F        +P  +        G + L  LI  AG A S  EARR +
Sbjct: 304 AAAQAAEEQFDLVFKQHAVPDDIPEFAADLAPNDEGTVYLAKLIADAGLAASAGEARRLI 363

Query: 373 KSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
               +K+N   +  +   +            L  GK+  +  
Sbjct: 364 DGGGVKVNGEPVPAKSYNVDPAMLAGA---TLQVGKRKFVRL 402


>gi|332968312|gb|EGK07384.1| tyrosine--tRNA ligase [Psychrobacter sp. 1501(2011)]
          Length = 411

 Score =  368 bits (945), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 94/406 (23%), Positives = 174/406 (42%), Gaps = 21/406 (5%)

Query: 15  RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLM 74
           RG     S    +  L     +    G+D TA  LH GH   +  L   Q  GH+   L+
Sbjct: 24  RGTYEIFSEEDLIAKLKLGRPLKIKAGFDPTAPDLHLGHTVLINKLKHFQDLGHEIYFLI 83

Query: 75  GGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCS 134
           G  T+ IGDPS ++ +R  +  +++  N +         +     K    ++ N  W   
Sbjct: 84  GDYTAKIGDPSGKNSTRPPLTDEQVLANAKTYAEQVFKILDKDKTK----VVFNSQWFNE 139

Query: 135 IKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCR 194
           +   D++ ++ S  +V+RML  +    R   +  ++  EF Y ++Q YD + L    +  
Sbjct: 140 MSAGDMI-QLASQLTVSRMLERDDFAKRYASQTPIAIHEFLYPLVQGYDSIAL----EAD 194

Query: 195 LQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTS 253
           ++MGG+DQ  N++ G  L  R        +T P+L    G  KM K+L   + +     +
Sbjct: 195 VEMGGTDQTFNLLMGRTLQGRYGHEAQVCITVPILEGLDGVNKMSKSLGNYVGIE---DA 251

Query: 254 PYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATEITTMVH 311
           P   +Q   ++ D  +  + + L+  PM E+D +      G+   E K+I+A E+    H
Sbjct: 252 PGVMFQKILSMPDTLIHRYFEFLSFKPMEEVDALMAEMENGRNPQEIKRILAEELIERFH 311

Query: 312 GREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRH 371
            +E AE A  +A            +P +++  +     + +  ++ +A  A ++  A+  
Sbjct: 312 DKEAAENAHKSAGNVLADGELPVDLPEVTLELEAGQEALFITQILNQADLAKNSAAAKDM 371

Query: 372 LKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           LK NA+K++   + N    +      S   + +  GKK      + 
Sbjct: 372 LKRNAVKVDGEEV-NAGFSLT-----SGQTVVIQAGKKAFAKVTIA 411


>gi|73748441|ref|YP_307680.1| tyrosyl-tRNA synthetase [Dehalococcoides sp. CBDB1]
 gi|147669221|ref|YP_001214039.1| tyrosyl-tRNA synthetase [Dehalococcoides sp. BAV1]
 gi|115305804|sp|Q3ZX03|SYY_DEHSC RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|73660157|emb|CAI82764.1| tyrosyl-tRNA synthetase [Dehalococcoides sp. CBDB1]
 gi|146270169|gb|ABQ17161.1| tyrosyl-tRNA synthetase [Dehalococcoides sp. BAV1]
          Length = 396

 Score =  368 bits (945), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 102/415 (24%), Positives = 184/415 (44%), Gaps = 27/415 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M   ++    IL  RG    I       +L S   +    G+D ++  +H GH+  L  L
Sbjct: 1   MNQSENQIDQILK-RGVAEVIVEEDFKKLLLSGRKLRLKEGFDPSSPDIHLGHMVALRKL 59

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             LQ  GH+ + ++G  T+ IGDPS    +R M+ +++++ N +     F   +     +
Sbjct: 60  RQLQDLGHQVVLIVGDWTAQIGDPSGASVTRPMLSAEQVKANAKTYLEQFFKIVDKDKTE 119

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
                     W  + K  D++R + S F+V +ML+ +    R    + +S  E  Y +LQ
Sbjct: 120 VRWQ----SEWYGNFKLEDVVR-LSSKFTVAQMLARDDFAKRYAAGKPISVTELLYPMLQ 174

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGK 239
           AYD V +  +    ++ GG+DQ  N++ G +L E +       L  P+L    G  KM K
Sbjct: 175 AYDSVMVKSD----VEFGGTDQKFNLLVGRELQEMVGQKPQQVLMVPILVGTDGVHKMSK 230

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EIN 296
           +L   I + ++   P   +    +I D  ++ + + +T +P  EI               
Sbjct: 231 SLGNYIGVAED---PSEIFGKCMSIPDELILQYFELVTDIPDQEIADFKAQMENGQVNPM 287

Query: 297 EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLI 356
             KK +A+E+ T ++    A++A              + MP   +   E  +  G++  I
Sbjct: 288 ILKKRLASELLTQLYNATAAQEADARFTRVVQRGEIPEDMPECRL---ENGQNTGVIDFI 344

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           + +G A S +EARR L+  A++IN+  IS++   +K  D        +  GK+ +
Sbjct: 345 ILSGLAKSKSEARRLLEQGAVEINSEKISDQNTPVKCGD-------IIKAGKRRY 392


>gi|15807614|ref|NP_296353.1| tyrosyl-tRNA synthetase [Deinococcus radiodurans R1]
 gi|81550553|sp|Q9RR63|SYY_DEIRA RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|6460463|gb|AAF12170.1|AE002092_8 tyrosyl-tRNA synthetase [Deinococcus radiodurans R1]
          Length = 411

 Score =  368 bits (945), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 99/426 (23%), Positives = 172/426 (40%), Gaps = 25/426 (5%)

Query: 1   MPAFKSDF-----LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLT 55
           M   + +      + +L  RG +  +S       +     +   +G D T   LH GH  
Sbjct: 3   MSEIRRNVPVNEQIQLLK-RGVVDLVSEEDLKRKIEKGEPLRVKLGADPTRPDLHLGHAV 61

Query: 56  QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK 115
            L  +   Q  GHK I L+G  T+ IGDPS + ++R  +  +E + N E         ++
Sbjct: 62  ILRKMRQFQDLGHKVIMLIGDFTATIGDPSGKSKTRPPLSLEEARANAESYLAQCRLILR 121

Query: 116 YGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFN 175
                 +  +  N  WL  + Y D++  + + ++V R+L  +    RL     +S  E  
Sbjct: 122 QEPEALE--IRYNSEWLEQLGYKDIIG-LAAKYTVARILERDDFTKRLSAGTPISMHELL 178

Query: 176 YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT 235
           Y + Q YD V L  +    +++GG+DQ  N + G  L           LT PLL    GT
Sbjct: 179 YPLTQGYDSVALHAD----VELGGTDQLFNNLVGRALQRDYGQEAQVVLTLPLLVGLDGT 234

Query: 236 -KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE 294
            KM K+L   I L  E   P+  +     + D  + ++   LT LP   I+    L    
Sbjct: 235 EKMSKSLDNYIGLTDE---PHAMFAGLMKVPDPLLDNYFTLLTDLPRERIEE---LLAGH 288

Query: 295 INEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG--MGL 352
              A + +A E+    H   + + A               ++P +S+   E++    + +
Sbjct: 289 PVAAHRELAREVVRAFHPDADLDAAEARFRSV-AKGGIPDNIPAVSVPASELNEQGHVSM 347

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
             L+V AG   S   AR+ +++  +K+     S+ + Q+  +       + +  GK    
Sbjct: 348 AKLVVLAGLEPSNGAARKLIQNRGLKLGGETYSDPQGQLTREQLTEG--VVIQKGKDKFA 405

Query: 413 ICHLCG 418
              L G
Sbjct: 406 RLVLEG 411


>gi|24214937|ref|NP_712418.1| tyrosyl-tRNA synthetase [Leptospira interrogans serovar Lai str.
           56601]
 gi|45657564|ref|YP_001650.1| tyrosyl-tRNA synthetase [Leptospira interrogans serovar Copenhageni
           str. Fiocruz L1-130]
 gi|81468629|sp|Q8F411|SYY_LEPIN RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|81568195|sp|Q72RP6|SYY_LEPIC RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|24195970|gb|AAN49436.1| tyrosyl-tRNA synthetase [Leptospira interrogans serovar Lai str.
           56601]
 gi|45600803|gb|AAS70287.1| tyrosyl tRNA synthetase [Leptospira interrogans serovar Copenhageni
           str. Fiocruz L1-130]
          Length = 405

 Score =  367 bits (944), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 104/411 (25%), Positives = 181/411 (44%), Gaps = 25/411 (6%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            +  RG +  IS       L  +  +    G+D TA  LH GH  QL  L   Q  GH+ 
Sbjct: 8   EIIRRGTVDLISEEELKSKLQKKKTLKIKAGFDPTAPDLHLGHFVQLKKLKHFQDLGHEV 67

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
             L+G  T++IGDP+ + E+R+ +  +E+ EN +  +      +     K    ++ N  
Sbjct: 68  SFLLGDFTAMIGDPTGKSETRKRLSREEVLENSKTYQNQVFKVLDPVKTK----IVYNSN 123

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           W   + + D+L  + S ++V RML  +    R K  Q +S +EF Y ++Q YD V +   
Sbjct: 124 WCSKMNFEDVL-VLSSKYNVARMLERDDFSKRYKAGQPISMIEFLYPLVQGYDSVAM--- 179

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNK 249
            +C +++GG+DQ  N++ G DL           LT PLL    G  KM K+L   + + +
Sbjct: 180 -ECDVELGGTDQKFNLLVGRDLQREYGKEAQCVLTLPLLVGLDGSKKMSKSLGNYVGITE 238

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAKKIIATEI 306
              +P + +    +I D  + ++ + LT LP+ EI+       K      E K  +A  I
Sbjct: 239 ---TPIDMFGKLMSISDDLMWNYFELLTDLPLPEIENRKNGMAKKELHPKEIKTELAKLI 295

Query: 307 TTMVHGREEAEKAATAAMECFD--MSIHSQHMPTISISKDEVSRGMG--LLTLIVKAGFA 362
                   E E+A     +  +         +  I + ++  +      L+ ++ K  F 
Sbjct: 296 MDQFSSPSENEEAIQEWKKIHNPKSRAVPDDVKEIKLGEEFFAETPEPLLVWVLSKLSFI 355

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            S +E RR +K+  + ++   I++EK  I+           +  GKK   +
Sbjct: 356 PSVSEGRRLIKAGGLYLSEDKITDEKFPIQ-----KGKEYLVRQGKKGKFL 401


>gi|226952841|ref|ZP_03823305.1| tyrosyl-tRNA synthetase [Acinetobacter sp. ATCC 27244]
 gi|226836462|gb|EEH68845.1| tyrosyl-tRNA synthetase [Acinetobacter sp. ATCC 27244]
          Length = 410

 Score =  367 bits (944), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 101/420 (24%), Positives = 177/420 (42%), Gaps = 28/420 (6%)

Query: 6   SDFL--SI---LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           S+FL       L +RG    IS    L  L     +    G+D TA  LH GH   +  L
Sbjct: 8   SNFLPAEEQLALIQRGTHEIISEEDLLKKLKENRPLRVKAGFDPTAPDLHLGHTVLINKL 67

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GH+   L+G  T++IGDPS +  +R  +  +++  N +  +      +     K
Sbjct: 68  KTFQDLGHEVTFLIGDYTAMIGDPSGKSATRPPLSKEQVLANAKTYQEQVFKILDPNKTK 127

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N  W       DL+ ++ S  +V+RML  +    R    Q ++  EF Y ++Q
Sbjct: 128 ----VRFNSEWFNQRTAADLI-QLASQQTVSRMLERDDFTKRYNNHQPIAIHEFLYPLVQ 182

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGK 239
            YD + L    +  +++GG+DQ  N++ G  L  R        +T P+L    G  KM K
Sbjct: 183 GYDSIAL----EADVELGGTDQTFNLLMGRTLQGRYGQESQVCITVPILEGLDGVNKMSK 238

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINE 297
           +L   I +     +P   +Q   ++ D+ +  +   L+   + EI         G+   E
Sbjct: 239 SLGNYIGV---FDTPGAMYQKILSMPDSLIERYFDLLSFKSLDEIKVLLDEMAAGRNPQE 295

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K+I+A E+    H  E AE A  +A          +  P + IS+ E    + + T++ 
Sbjct: 296 IKRILALELVERFHDAEAAENAHKSAGNRVTEGEVPEDTPEVIISRGEFGGELFIATILR 355

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            AG   +   A+  +   A+K++ +++ +    +K         + +  GKK   I  + 
Sbjct: 356 VAGLNPNAASAKDAVGRGAVKVDWNVV-DMSYSVKE-----NVTLIIQSGKK--AIARVT 407


>gi|78776919|ref|YP_393234.1| tyrosyl-tRNA synthetase [Sulfurimonas denitrificans DSM 1251]
 gi|115305830|sp|Q30SN2|SYY_SULDN RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|78497459|gb|ABB43999.1| tyrosyl-tRNA synthetase [Sulfurimonas denitrificans DSM 1251]
          Length = 399

 Score =  367 bits (943), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 104/399 (26%), Positives = 181/399 (45%), Gaps = 29/399 (7%)

Query: 24  PRELDILCSQGVV-TAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIG 82
            + L     +G   T   G+D TA  LH GH   L  L   QK G +   L+G  T+ IG
Sbjct: 23  EKLLKAYFEKGETYTVKAGFDPTAPDLHLGHTVLLQKLAIFQKYGARVQFLIGDFTAQIG 82

Query: 83  DPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLR 142
           DPS +  +R+++ +++I EN +  K      +      +   ++ N  WL ++    ++ 
Sbjct: 83  DPSGKSATRKILSTEDILENAKSYKEQVFKILD----ASKTDVVFNSEWLNALGASGMI- 137

Query: 143 EIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQ 202
            + + F+V RML  +    R K   S++  EF Y +LQ YD V L  +    +++GG+DQ
Sbjct: 138 TLTTTFNVARMLERDDFDKRYKSGTSIAISEFLYPLLQGYDSVHLKSD----IEVGGTDQ 193

Query: 203 WGNIICGIDLGERLK-TPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQY 260
             N++ G  L        +   L  P+L    G  KM K+L   I +++    P   +  
Sbjct: 194 KFNLLMGRHLQRSYDVGKEQAVLMVPILEGLDGVQKMSKSLGNYIGVSEN---PNEIFGK 250

Query: 261 WRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKIIATEITTMVHGREEAE 317
             +I D  +  + + L+T  ++EI+R+    +       + K+ +A EIT   H  E A+
Sbjct: 251 VLSISDELMWRYYELLSTKTLAEIERLKSGVEAGTLHPKKVKEELAIEITARFHSSESAQ 310

Query: 318 KAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAI 377
            A     + FD    +  +PT  + +   S  + +   +V      ST++ARR +K  A+
Sbjct: 311 NA----KDEFDRVHSNNQIPT-EMDEFSSSEAISITKALVDCNLTPSTSQARRDIKQGAV 365

Query: 378 KINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +IN   I +E L ++      +G   L  GK+      +
Sbjct: 366 RINQEKIDDETLSLE------SGEYILQVGKRKFAKLKV 398


>gi|78049566|ref|YP_365741.1| tyrosyl-tRNA synthetase [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
 gi|115305831|sp|Q3BNC2|SYY_XANC5 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|78037996|emb|CAJ25741.1| tyrosyl-tRNA synthetase [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
          Length = 403

 Score =  367 bits (943), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 97/411 (23%), Positives = 168/411 (40%), Gaps = 24/411 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG    +   +    L +   +    G+D TA  LH GH   L  +   Q+ GH+ I
Sbjct: 10  LIGRGAEEILKLDQLQARLATGKPLRVKAGFDPTAPDLHLGHTVLLNKMRQFQQLGHQVI 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T +IGDPS ++ +R+ +  +++  N    +      +     +    +  N  W
Sbjct: 70  FLIGDFTGMIGDPSGKNATRKPLSREDVLANARTYEEQVFKILDRERTE----VRFNSEW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
              +   D+++ + +  +V RML  +    R   +Q ++  EF Y ++Q YD V L  + 
Sbjct: 126 FGQMSAADMIK-LSAQHTVARMLERDDFAKRFGSQQPIAIHEFLYPLVQGYDSVALKAD- 183

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G  L E         LT PLL    G  KM K+L   I +N+ 
Sbjct: 184 ---VELGGTDQKFNLLMGRGLQEHYGQAPQIVLTMPLLEGLDGVAKMSKSLGNYIGINEP 240

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTT-LPMSEIDRMAKLQGK---EINEAKKIIATEI 306
                +       I D     +   L+  + ++E  R+ +          E K  +A E+
Sbjct: 241 A---IDIVTKTMKIGDELTWRWIDLLSFDISLAEAARLKEQVAAGELHPREVKLRLAREL 297

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
            T  H    AE+A             +  +P   +   +   G+ L  L+  AG   S +
Sbjct: 298 ATRFHDAATAEQAIAGWHAVVTGQGDTSLLPLQEVVVPD--EGLRLAGLLTAAGLTPSNS 355

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           EA R LK  A++I+  ++ +         F       +  GK+N     L 
Sbjct: 356 EATRKLKERAVRIDGEVVEDPSRV-----FTHGFEGVIQVGKRNFARVLLV 401


>gi|326561712|gb|EGE12047.1| tyrosyl-tRNA synthetase [Moraxella catarrhalis 7169]
          Length = 406

 Score =  367 bits (943), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 100/417 (23%), Positives = 183/417 (43%), Gaps = 27/417 (6%)

Query: 6   SDFLSI-----LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           SDFL I     L  RG     S    +  L     +   +G D TA+ LH GH   L  L
Sbjct: 2   SDFLPIKDQLTLIMRGVQEIYSKEDLIKKLEKNRPLRIKLGMDPTAADLHLGHTVVLNKL 61

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GH+ + L+G  T+ IGDPS ++ +R  +   E++ N +         +     K
Sbjct: 62  RHFQDLGHEVLFLIGDYTARIGDPSGKNATRPPLTEAEVKANAQTYAKQVFKILDKDKTK 121

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               ++ N  W   +   D++ ++ S  +V+RML  +    R   +  ++  EF Y ++Q
Sbjct: 122 ----IVFNSDWFGKMSAGDMI-QLASQVTVSRMLERDDFAKRYGNQTPIAIHEFLYPLVQ 176

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGK 239
            YD + L  +    +++GG+DQ  N++ G  L  R        +T P+L    G  KM K
Sbjct: 177 GYDSIALDAD----VELGGTDQTFNLLMGRTLQGRYDKEPQVCITMPILEGLDGVQKMSK 232

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINE 297
           +L   I +N         +Q   ++ D  +  + + L+  PMSE++        G+   E
Sbjct: 233 SLGNYIGINDPAGV---MYQKILSMPDTLIARYFELLSFKPMSEVNALLDDMKNGRNPQE 289

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K+I+A E+    H +E A+ A  +A            +P +S+S +     + +  ++ 
Sbjct: 290 IKRILALELIERFHDKESADNAHKSAGNRLADGELPVDLPEVSLSLN-GQDKLFITQVLN 348

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +AG A ++ +A+  L   A+K++  ++ +    ++         + +  GKK +   
Sbjct: 349 QAGLAKNSAQAKDMLSRGAVKVDGQVV-DGSFALE-----QGQTVVIQAGKKAYARV 399


>gi|241956354|ref|XP_002420897.1| tyrosine-tRNA ligase, putative; tyrosyl-tRNA synthetase,
           mitochondrial precursor, putative [Candida dubliniensis
           CD36]
 gi|223644240|emb|CAX41050.1| tyrosine-tRNA ligase, putative [Candida dubliniensis CD36]
          Length = 501

 Score =  367 bits (943), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 126/458 (27%), Positives = 213/458 (46%), Gaps = 44/458 (9%)

Query: 2   PAFKSDFLSILSERGFIHQISNPR--ELDILCSQGVVTAYIGYDLTASSLHAGHLTQLML 59
               +  L  L  R  I  I++    +L    +      Y G D TASSLH G+L  LM+
Sbjct: 46  TNPDNSLLEYLQSRHLIESITDDSLYKLTKRGTNHKFKLYCGADPTASSLHLGNLLPLMV 105

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG-- 117
           L   + +G+  + L+GG T ++GDPS R   R  +   E+++N+ KI+   S+F+  G  
Sbjct: 106 LLHFKMSGNDVVGLVGGATGLVGDPSGRKTERNKIDEVEVEDNVTKIQRQISTFLSNGIE 165

Query: 118 ----------TGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ 167
                         +   +NN +W  ++K ++ L   G    V+ ML+ +S++SRL+   
Sbjct: 166 YAKSRQFPMTEKLGETTSVNNASWWENVKMLEFLAVYGRHIRVSSMLARDSIQSRLESG- 224

Query: 168 SLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL-----KTPKLF 222
            + F EF Y ILQAYDF  L K+ +  +Q+GG+DQWGNI  GIDL  RL     K  + +
Sbjct: 225 GIGFNEFTYQILQAYDFWHLYKDENVNMQVGGNDQWGNITAGIDLISRLRKFHDKKHEAY 284

Query: 223 ALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMS 282
            LT PLLTT+SG K GK+   A++++  +T+PY  +QY+ N+ D  V    K  T LP++
Sbjct: 285 GLTVPLLTTSSGEKFGKSAGNAVFIDSNLTTPYQMYQYFINVPDDIVGKLLKVFTLLPLN 344

Query: 283 EID---RMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMEC-------FDMSIH 332
            I+            +  A++++A E+  ++HG    ++ A             F+ ++ 
Sbjct: 345 VIEGELLPKHNSDPGLRIAQRVLAREVVDLIHGVGVGDEMAFITGFLFPTPDQPFNDNVS 404

Query: 333 SQHMPT--------ISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIK--INNS 382
           +  +              K      + L  L+       S +E RR +K+  +   ++ +
Sbjct: 405 ADKLIENFKRSGILFKRDKPSPEEEIKLSALLADI-VGKSKSEMRRLIKAGGVYMGLDRN 463

Query: 383 IISNEKLQI---KLQDFDSTGNIKLSFGKKNHIICHLC 417
            I +    I             + +  GK+N+ +    
Sbjct: 464 QIEDPDDVILFDVDNHLIDGKLLLVRVGKQNYYVVEFV 501


>gi|89099473|ref|ZP_01172349.1| tyrosyl-tRNA synthetase [Bacillus sp. NRRL B-14911]
 gi|89085859|gb|EAR64984.1| tyrosyl-tRNA synthetase [Bacillus sp. NRRL B-14911]
          Length = 415

 Score =  367 bits (943), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 101/406 (24%), Positives = 177/406 (43%), Gaps = 29/406 (7%)

Query: 19  HQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
             +   +EL    ++       +   +G D +A  +H GH   L  L   Q+ GH    +
Sbjct: 28  QDVVPLQELKNKIAKSLFLGKPLKVKLGLDPSAPDVHLGHTVVLNKLKQFQENGHTIQLI 87

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
           +G  T  IGDP+ +  +R+ +  +E++ N E     F   +  G     A +  N  WL 
Sbjct: 88  IGDFTGKIGDPTGKSAARKQLNDEEVKHNAETYFEQFGKVLDMG----KAELHYNSKWLS 143

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDC 193
           ++   D++ E+    +V R+L       RL   + +S  EF Y ++Q YD V L  +   
Sbjct: 144 ALHLQDVI-ELAGKITVARLLERNDFSERLGAGKPISLHEFFYPLMQGYDSVMLESD--- 199

Query: 194 RLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMT 252
            +++GG+DQ  N++ G  L E     K   +  PLL    G  KM K+ +  I ++++  
Sbjct: 200 -IELGGNDQHFNVLMGRHLQEHYGKEKQVVILVPLLEGLDGKEKMSKSKNNYIGVDEK-- 256

Query: 253 SPYNFWQYWRNIDDADVVSFAKRLTTLPMSE---IDRMAKLQGKEINEAKKIIATEITTM 309
            P + +    +I D  +  + +  T+LP++E   I    +       +AK  +A  I +M
Sbjct: 257 -PEDMYGKAMSIPDELMEKYFRLATSLPLAEKMSIQEKLEEGSLHPRDAKMQLARTIVSM 315

Query: 310 VHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEAR 369
            HG E AEKA       F      + MP ++    +      LL L++ AGF  S +EAR
Sbjct: 316 YHGHEAAEKAEDHFKSVFQQGSMPEDMPALTWDGSDEP---DLLELLMFAGFFPSRSEAR 372

Query: 370 RHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
             + +  +++N     +   ++ LQ       + L  GK+      
Sbjct: 373 WMVLNGGVRMNGEKAEDINTKVSLQ-----AELILQVGKRKFARIK 413


>gi|325924893|ref|ZP_08186325.1| tyrosyl-tRNA synthetase [Xanthomonas perforans 91-118]
 gi|325544680|gb|EGD16031.1| tyrosyl-tRNA synthetase [Xanthomonas perforans 91-118]
          Length = 403

 Score =  367 bits (942), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 98/411 (23%), Positives = 168/411 (40%), Gaps = 24/411 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG    +   +    L +   +    G+D TA  LH GH   L  +   Q+ GH+ I
Sbjct: 10  LIGRGAEEVLKLDQLQARLATGKPLRVKAGFDPTAPDLHLGHTVLLNKMRQFQQLGHQVI 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T +IGDPS ++ +R+ +  +++  N    +      +     +    +  N  W
Sbjct: 70  FLIGDFTGMIGDPSGKNATRKPLSREDVLANARTYEEQVFKILDRERTE----VRFNSEW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
              +   D+++ + +  +V RML  +    R   +Q ++  EF Y ++Q YD V L  + 
Sbjct: 126 FGQMSAADMIK-LSAQHTVARMLERDDFAKRFGSQQPIAIHEFLYPLVQGYDSVALKAD- 183

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G  L E         LT PLL    G  KM K+L   I +N+ 
Sbjct: 184 ---VELGGTDQKFNLLMGRGLQEHYGQAPQIVLTMPLLEGLDGVAKMSKSLGNYIGINEP 240

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTT-LPMSEIDRMAKLQGK---EINEAKKIIATEI 306
                +       I D     +   L+  + ++E  R+ +          E K  +A E+
Sbjct: 241 A---IDIVTKTMKIGDELTWRWIDLLSFDISLAEAARLKEQVAAGELHPREVKLRLAREL 297

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
            T  H    AE+A             +  +P   +   +   G+ L  L+  AG   S +
Sbjct: 298 ATRFHDAATAEQAIAGWHAVVTGQGDTSLLPLQEVVVPD--EGLRLAGLLTAAGLTPSNS 355

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           EA R LK  A+KI+  ++ +         F       +  GK+N     L 
Sbjct: 356 EATRKLKERAVKIDGEVVEDPSRV-----FTHGFEGVIQVGKRNFARVLLV 401


>gi|320108846|ref|YP_004184436.1| tyrosyl-tRNA synthetase [Terriglobus saanensis SP1PR4]
 gi|319927367|gb|ADV84442.1| tyrosyl-tRNA synthetase [Terriglobus saanensis SP1PR4]
          Length = 417

 Score =  367 bits (942), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 101/397 (25%), Positives = 180/397 (45%), Gaps = 29/397 (7%)

Query: 30  LCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDE 89
           + S   +    G+D TA  LH GH   +  L   Q+ GH+ I L+G  T++IGDP+ + +
Sbjct: 38  IASGTPMRIKAGFDPTAPDLHLGHTVLMRKLRHFQQLGHQVIFLIGDFTALIGDPTGKSQ 97

Query: 90  SRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFS 149
           +R+ +  ++I  N E  +      +     +    +  N  WL  ++Y D +R + + F+
Sbjct: 98  TRKPLTREQIALNAETYQEQVFKILDRDKTE----VRYNSEWLGELRYEDTIR-LMAQFT 152

Query: 150 VNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICG 209
           +++M+  E    R   E+ ++  E  Y ++Q YD V L  +    +++GG+DQ  N++ G
Sbjct: 153 LSQMIEREEFHKRFNAEEPIALHELMYPVMQGYDSVALKSD----VELGGTDQKFNLMRG 208

Query: 210 IDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDAD 268
            DL           LT P++    G  KM K+L+ AI + +   +P++ +     + D  
Sbjct: 209 RDLQRHFGQQPQIVLTMPIIEGLDGVQKMSKSLNNAIGVTE---APFDMFTKLMQVSDEL 265

Query: 269 VVSFAKRLTTLPMSEIDRMAKLQGK---EINEAKKIIATEITTMVHGREEAEKAATAAME 325
           +  +   LT LP S+ID + +          +AKK +A  IT   H  E A++A      
Sbjct: 266 MWKYYTFLTDLPQSQIDALREQVAAGTLHPMQAKKDLARTITAGFHTAEAAQRAEENWST 325

Query: 326 CFDMSIHSQHMPTISISKDEV-----SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKIN 380
            F     S     I++ K E+        + +  L+V AG A S  EARR     A++I+
Sbjct: 326 QFQKGGVSDDTERITVPKSELGVETEPLSLNVDRLLVTAGLANSMGEARRKRSEKAVRID 385

Query: 381 NSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            ++I   +  +          + +  GK+      L 
Sbjct: 386 EAVILEPRYALVTDPV----TLTVRLGKR----VKLV 414


>gi|262377634|ref|ZP_06070854.1| tyrosyl-tRNA synthetase [Acinetobacter lwoffii SH145]
 gi|262307393|gb|EEY88536.1| tyrosyl-tRNA synthetase [Acinetobacter lwoffii SH145]
          Length = 408

 Score =  367 bits (942), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 104/425 (24%), Positives = 182/425 (42%), Gaps = 28/425 (6%)

Query: 1   MPAFKSDFL--SI---LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLT 55
           M    S+FL       L +RG    IS    L  L     +    G+D TA  LH GH  
Sbjct: 1   MDFVMSNFLPAEEQLALIQRGTHEIISEEDLLKKLKQNRPLKIKAGFDPTAPDLHLGHTV 60

Query: 56  QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK 115
            +  L   Q  GH+ + L+G  T++IGDP+ +  +R  +  +++ EN +  +      + 
Sbjct: 61  LINKLKVFQDLGHEVLFLIGDYTAMIGDPTGKSATRPPLSREQVLENAKTYQEQVFKILD 120

Query: 116 YGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFN 175
               K    ++ N  W       DL+ ++ S  +V RML  +    R   +Q ++  EF 
Sbjct: 121 PDKTK----VVFNSEWFAQKTAADLI-QLASQQTVARMLERDDFTKRYNNQQPIAIHEFL 175

Query: 176 YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT 235
           Y ++Q YD V L    +  +++GG+DQ  N++ G  L  R        +T P+L    G 
Sbjct: 176 YPLVQGYDSVAL----EADVELGGTDQTFNLLMGRTLQGRYNQEAQVCITVPILEGLDGV 231

Query: 236 -KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQG 292
            KM K+L   I +     +P   +Q   ++ DA +  +   L+   + EI +      +G
Sbjct: 232 NKMSKSLGNYIGV---FDAPGAMYQKVLSMPDALIERYFDLLSFKTIEEIQQLLKEVAEG 288

Query: 293 KEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGL 352
           +   E KKI+A E+    HG E A  A   A          +  P ++IS+ E    + +
Sbjct: 289 RNPQEVKKILALELVERFHGAEAAANAHKGAGNIITEGELPEGTPEVTISRGEFGGEIFI 348

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
            +++ +AG   +  +A+  L   A+K++   + +    +K         + +   KK   
Sbjct: 349 TSILREAGLTKNAAQAKDALGRGAVKVDWQTV-DTTYSVKE-----NVTLIVQASKK--A 400

Query: 413 ICHLC 417
           I  + 
Sbjct: 401 IAKVT 405


>gi|294648689|ref|ZP_06726150.1| tyrosine--tRNA ligase [Acinetobacter haemolyticus ATCC 19194]
 gi|292825419|gb|EFF84161.1| tyrosine--tRNA ligase [Acinetobacter haemolyticus ATCC 19194]
          Length = 410

 Score =  367 bits (942), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 101/420 (24%), Positives = 177/420 (42%), Gaps = 28/420 (6%)

Query: 6   SDFL--SI---LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           S+FL       L +RG    IS    L  L     +    G+D TA  LH GH   +  L
Sbjct: 8   SNFLPAEEQLALIQRGTHEIISEEDLLKKLKENRPLRVKAGFDPTAPDLHLGHTVLINKL 67

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GH+   L+G  T++IGDPS +  +R  +  +++  N +  +      +     K
Sbjct: 68  KTFQDLGHEVTFLIGDYTAMIGDPSGKSATRPPLSKEQVLANAKTYQEQVFKILDPNKTK 127

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N  W       DL+ ++ S  +V+RML  +    R    Q ++  EF Y ++Q
Sbjct: 128 ----VRFNSEWFNQRTAADLI-QLASQQTVSRMLERDDFTKRYNNHQPIAIHEFLYPLVQ 182

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGK 239
            YD + L    +  +++GG+DQ  N++ G  L  R        +T P+L    G  KM K
Sbjct: 183 GYDSIAL----EADVELGGTDQTFNLLMGRTLQGRYGQESQVCITVPILEGLDGVNKMSK 238

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINE 297
           +L   I +     +P   +Q   ++ D+ +  +   L+   + EI         G+   E
Sbjct: 239 SLGNYIGV---FDTPGAMYQKILSMPDSLIERYFDLLSFKSLDEIKILLDEMAAGRNPQE 295

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K+I+A E+    H  E AE A  +A          +  P + IS+ E    + + T++ 
Sbjct: 296 IKRILALELVERFHDAEAAENAHKSAGNRVTEGEVPEDTPEVIISRGEFGGELFIATILR 355

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            AG   +   A+  +   A+K++ +++ +    +K         + +  GKK   I  + 
Sbjct: 356 VAGLNPNAASAKDAVGRGAVKVDWNVV-DMSYSVKE-----NVTLIIQSGKK--AIARVT 407


>gi|294338521|emb|CAZ86850.1| Tyrosyl-tRNA synthetase (Tyrosine--tRNA ligase) (TyrRS) (TyrRZ)
           [Thiomonas sp. 3As]
          Length = 411

 Score =  366 bits (941), Expect = 3e-99,   Method: Composition-based stats.
 Identities = 98/410 (23%), Positives = 176/410 (42%), Gaps = 29/410 (7%)

Query: 10  SILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
            +L E  +I +++         +   +   +G D TA  +H GH   L  L  LQ  GH 
Sbjct: 27  ELLVEADWIAKLT-----RSHQTGQPLRIKLGLDPTAPDIHIGHTVVLNKLRQLQDLGHT 81

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
            I L+G  TS IGDPS R+ +R  +  ++I+ N +      S  +     +    +  N 
Sbjct: 82  VIFLIGDFTSRIGDPSGRNATRPPLTIEQIKTNAQTYYAQASLVLDPQKTE----IRYNS 137

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
            W   +    ++R + + +++ R+L  +    R K    ++  E  Y ++Q +D V L  
Sbjct: 138 EWSEPLGADGMIR-LAAKYTLARLLERDDFTKRFKEGVPIAMHELLYPLMQGFDSVALKS 196

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLN 248
           +    L++GG+DQ  N++ G +L           LT PLL    G  KM K+    I + 
Sbjct: 197 D----LELGGTDQKFNLLVGRELQREYGQEPQCILTMPLLEGLDGVEKMSKSKGNYIGIQ 252

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEI 306
           +   +P   +    +I D  +  + + L+  PMSEI   +     G+   +AK ++A E+
Sbjct: 253 E---APATMFAKLLSISDVLMWRYYELLSFRPMSEIAALKAEVEAGRNPKDAKVMLAREL 309

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
            T  H    A+ A           I    +P + ++  E   G+ L   + +AG   ST 
Sbjct: 310 VTRFHSASAADAAEADFALRASGGI-PDDIPEVRLALPE--GGLALPQALKQAGLVPSTA 366

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           E  R ++   ++I+ ++  +  L++        G + L  GK+      L
Sbjct: 367 EGVRMIEQRGVRIDGTVAEDRTLKL------GAGTVVLQVGKRKFARVTL 410


>gi|285808325|gb|ADC35855.1| putative tyrosyl-tRNA synthetase [uncultured bacterium 92]
          Length = 404

 Score =  366 bits (941), Expect = 3e-99,   Method: Composition-based stats.
 Identities = 100/413 (24%), Positives = 177/413 (42%), Gaps = 29/413 (7%)

Query: 15  RGFIHQISNPRELDI-----LCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
           RG +  +     L       L +   +   +G+D TA  LH GH   +  +   Q  GH+
Sbjct: 12  RGCV-DVVRLDALKARLTARLAAGRPLVVKVGFDPTAPDLHLGHTVLIRKMKHFQDLGHR 70

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
            + ++G  T++IGDPS R ++R  +   EI  N E  K      +     +   ++  N 
Sbjct: 71  VVFVVGDFTAMIGDPSGRSKTRPPLTPDEIDRNAETYKAQVFKILD----REKTVVEFNS 126

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
            WL  +    L+R + + ++V +ML     R R    Q ++  EF Y + QAYD V L  
Sbjct: 127 RWLSPLGASGLIR-LAARYNVAQMLERREFRQRFDAGQPIAVHEFLYPLAQAYDSVAL-- 183

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLN 248
             +  +++GG+DQ  N+  G D+           +T+PLL    G  KM K+L   + + 
Sbjct: 184 --EADVELGGTDQLFNLNVGRDIMPSYGLEPQIVMTTPLLEGLDGVEKMSKSLGNYVGVT 241

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAKKIIATE 305
           +      + +    +I D  +  + + LT L   EID +            +AK  +A  
Sbjct: 242 ESAD---SMFGKLMSISDTLMWRYYQLLTDLGGPEIDTLQAKVTSGDVHPKQAKVDLARR 298

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           I    H   +A++AA               + ++++   E      L  L+V AG A ST
Sbjct: 299 IVADYHSTTDADRAAEEFERVHARGELPSDLRSVAV-VFEPDPSKALTRLMVDAGLAAST 357

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLCG 418
           +EA R ++   +++  + I++ + +++  D  S     L  G   H +  + G
Sbjct: 358 SEAGRKIQQGGVRLAGTRIADARHRVQPSDLPS----VLQVG--RHAVQLVAG 404


>gi|296134576|ref|YP_003641818.1| tyrosyl-tRNA synthetase [Thiomonas intermedia K12]
 gi|295794698|gb|ADG29488.1| tyrosyl-tRNA synthetase [Thiomonas intermedia K12]
          Length = 411

 Score =  366 bits (941), Expect = 3e-99,   Method: Composition-based stats.
 Identities = 98/410 (23%), Positives = 176/410 (42%), Gaps = 29/410 (7%)

Query: 10  SILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
            +L E  +I +++         +   +   +G D TA  +H GH   L  L  LQ  GH 
Sbjct: 27  ELLVEADWIAKLT-----RSHQTGQPLRIKLGLDPTAPDIHIGHTVVLNKLRQLQDLGHT 81

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
            I L+G  TS IGDPS R+ +R  +  ++I+ N +      S  +     +    +  N 
Sbjct: 82  VIFLIGDFTSRIGDPSGRNATRPPLTIEQIKTNAQTYYAQASLVLDPQKTE----IRYNS 137

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
            W   +    ++R + + +++ R+L  +    R K    ++  E  Y ++Q +D V L  
Sbjct: 138 EWSEPLGADGMIR-LAAKYTLARLLERDDFTKRFKEGVPIAMHELLYPLMQGFDSVALKS 196

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLN 248
           +    L++GG+DQ  N++ G +L           LT PLL    G  KM K+    I + 
Sbjct: 197 D----LELGGTDQKFNLLVGRELQREYGQEPQCILTMPLLEGLDGVEKMSKSKGNYIGIQ 252

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEI 306
           +   +P   +    +I D  +  + + L+  PMSEI   +     G+   +AK ++A E+
Sbjct: 253 E---APATMFAKLLSISDVLMWRYFELLSFRPMSEIAALKAEVEAGRNPKDAKVMLAREL 309

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
            T  H    A+ A           I    +P + ++  E   G+ L   + +AG   ST 
Sbjct: 310 VTRFHSASAADAAEADFALRASGGI-PDDIPEVRLALPE--GGLALPQALKQAGLVPSTA 366

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           E  R ++   ++I+ ++  +  L++        G + L  GK+      L
Sbjct: 367 EGVRMIEQRGVRIDGTVAEDRTLKL------GAGTVVLQVGKRKFARVTL 410


>gi|68483513|ref|XP_714317.1| likely mitochondrial tyrosyl-tRNA synthetase [Candida albicans
           SC5314]
 gi|68484079|ref|XP_714042.1| likely mitochondrial tyrosyl-tRNA synthetase [Candida albicans
           SC5314]
 gi|46435567|gb|EAK94946.1| likely mitochondrial tyrosyl-tRNA synthetase [Candida albicans
           SC5314]
 gi|46435873|gb|EAK95246.1| likely mitochondrial tyrosyl-tRNA synthetase [Candida albicans
           SC5314]
          Length = 501

 Score =  366 bits (941), Expect = 3e-99,   Method: Composition-based stats.
 Identities = 128/458 (27%), Positives = 213/458 (46%), Gaps = 44/458 (9%)

Query: 2   PAFKSDFLSILSERGFIHQISNPR--ELDILCSQGVVTAYIGYDLTASSLHAGHLTQLML 59
               +  L  L  R  I  I++    +L    S      Y G D TASSLH G+L  LM+
Sbjct: 46  TNPDNSLLEYLQSRHLIESITDDNLYKLTKRGSNHKFKLYCGADPTASSLHLGNLLPLMV 105

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG-- 117
           L   + +G+  + L+GG T ++GDPS R   R  +   E+++N+ KI+   S+F+  G  
Sbjct: 106 LLHFKMSGNDVVGLVGGATGLVGDPSGRKTERNKIDEVEVEDNVTKIQRQISTFLSNGIE 165

Query: 118 ----------TGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ 167
                         D   +NN +W  ++K ++ L   G    V+ ML+ +S++SRL+   
Sbjct: 166 YAKSRQFPMTEKVGDTTSVNNASWWENVKMLEFLATYGRHIRVSSMLARDSIQSRLESG- 224

Query: 168 SLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL-----KTPKLF 222
            + F EF Y ILQAYDF  L K+ +  +Q+GG+DQWGNI  GIDL  RL     K  + +
Sbjct: 225 GIGFNEFTYQILQAYDFWHLYKDENVNMQVGGNDQWGNITAGIDLISRLKKFHGKKHEAY 284

Query: 223 ALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMS 282
            LT PLLTT+SG K GK+   A++++  +T+PY  +QY+ N+ D  V    K  T LP++
Sbjct: 285 GLTVPLLTTSSGEKFGKSAGNAVFIDSSLTTPYQMYQYFINVPDDIVGKLLKVFTLLPLN 344

Query: 283 EID---RMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMEC-------FDMSIH 332
            I+            +  A++++A E+  ++HG    ++ A             F+ ++ 
Sbjct: 345 VIEGELLPKHNSDPGLRIAQRVLAREVVDLIHGVGVGDEMAFITGFLFPTPDQPFNDNVS 404

Query: 333 SQHMPT--------ISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIK--INNS 382
           +  +             +K      + L  L+       S  E RR +K+  +   ++ +
Sbjct: 405 ADKLIENFKRSGILFKRNKPSPDEEIKLSALLADI-VGKSKGEMRRLIKAGGVYMGLDRN 463

Query: 383 IISNEKLQI---KLQDFDSTGNIKLSFGKKNHIICHLC 417
            I +    I             + +  GK+N+ +    
Sbjct: 464 QIEDPDDVILFDVDNHLIDGKLLLVRVGKQNYYVVEFV 501


>gi|210622728|ref|ZP_03293320.1| hypothetical protein CLOHIR_01268 [Clostridium hiranonis DSM 13275]
 gi|210154060|gb|EEA85066.1| hypothetical protein CLOHIR_01268 [Clostridium hiranonis DSM 13275]
          Length = 431

 Score =  366 bits (941), Expect = 3e-99,   Method: Composition-based stats.
 Identities = 83/398 (20%), Positives = 176/398 (44%), Gaps = 30/398 (7%)

Query: 18  IHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPIS 72
           +  + + ++L    ++       +   +G D +A  +H GH   L  +  LQ  GH+ + 
Sbjct: 46  VDSLIDEKDLKEKLTKAQKEDKPLVIKLGLDPSAPDIHLGHTVVLRKMKQLQDLGHQVVI 105

Query: 73  LMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL 132
           ++G  T  IGDP+ + ++R+ + ++++ EN +  +      +     K   ++  N  WL
Sbjct: 106 IIGDFTGKIGDPTGKSKTRKALTTEQVLENAKTYQEQIFKVLD----KDKTIVRYNSEWL 161

Query: 133 CSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYD 192
             + + ++++ + +  +V RML  E  + R + +  +S  EF Y ++QAYD + +  +  
Sbjct: 162 GKLNFEEVIK-LAATITVARMLEREDFKKRYEGQMPISVHEFFYPLMQAYDSIAIDAD-- 218

Query: 193 CRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEM 251
             +++GG+DQ  N++ G  L           +  PLL    G  KM K+L   I +++E 
Sbjct: 219 --IELGGTDQRFNLLMGRSLQREFDKESQVVIMMPLLEGLDGVNKMSKSLGNYIGIDEEA 276

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATEITTM 309
                 +Q    I D  ++ +   +T +    +  +      G    + K  +A EI T+
Sbjct: 277 GL---MYQKAMEIPDELIIKYYNLVTDVHPDAVAEIEAKLEGGANPRDIKMELAKEIVTL 333

Query: 310 VHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEAR 369
            HG E+A++A       F        + T+ ++  ++     +  + V+     S +E R
Sbjct: 334 YHGEEKAQEAENRFKSVFQKGNIPDDILTVEVAAADL----DIAGIAVENKLVPSKSEIR 389

Query: 370 RHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFG 407
           R  K   +K+N   +++          ++ G + +  G
Sbjct: 390 RLAKQGGVKVNGEKVNDLNAV------EANGELVIQIG 421


>gi|225873912|ref|YP_002755371.1| tyrosine--tRNA ligase [Acidobacterium capsulatum ATCC 51196]
 gi|225793777|gb|ACO33867.1| tyrosine--tRNA ligase [Acidobacterium capsulatum ATCC 51196]
          Length = 415

 Score =  366 bits (941), Expect = 3e-99,   Method: Composition-based stats.
 Identities = 103/418 (24%), Positives = 185/418 (44%), Gaps = 30/418 (7%)

Query: 11  ILSERGFIHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
            L E+G   +I    +L     +       +    G+D TA  LH GH   +  L   Q 
Sbjct: 12  DLLEKGA-AEIIRVSDLRERLEKSRQTGKPLRVKAGFDPTAPDLHLGHTVLVRKLKHFQD 70

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH  I L+G  T++IGDP+ R  +R+ +  ++I +N +         +     +    +
Sbjct: 71  LGHTVIFLVGDYTALIGDPTGRSATRKPLTREQIDQNAQTYTDQVFKILDREKTE----V 126

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
             N  WL  + + D++R + + F+V++ML      +R + EQ +S  EF Y + Q YD V
Sbjct: 127 RFNSEWLGKLSFEDIIR-LAAKFTVSQMLERAEFHARFQNEQPISLHEFMYPLAQGYDSV 185

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGA 244
            L    +  +++GG+DQ  N++ G +L      P    L +P++    G  KM K+L  A
Sbjct: 186 AL----EADVELGGTDQKFNLLAGRELQRDFGQPPQIVLMTPIIEGLDGVQKMSKSLGNA 241

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAKKI 301
           I +++    P   +    +I+D  +  +   LT L  SEID+M            EAKK 
Sbjct: 242 IGIHEP---PQEMYGKLMSINDELMWRYWTLLTDLRQSEIDQMQAHVTSGALHPMEAKKH 298

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHS-QHMPTISISKDEV----SRGMGLLTLI 356
           +A  I    HG E A+ A       F       + +  ++++ + +     +G+ +  L+
Sbjct: 299 LARTIVAGFHGAEAAQVADENWARQFQQKSDDVEGLEELTLTPEALGFDPEKGIRVSKLL 358

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
              G A S++EA R +K  A++++  ++    + +          I    GK+  +  
Sbjct: 359 TALGLAASSSEADRKIKEGAVRLDGEVVRQSYIPLNGS---RPARITARVGKRAKVAV 413


>gi|317146027|ref|XP_001821240.2| tyrosyl-tRNA synthetase [Aspergillus oryzae RIB40]
          Length = 617

 Score =  366 bits (940), Expect = 4e-99,   Method: Composition-based stats.
 Identities = 129/497 (25%), Positives = 217/497 (43%), Gaps = 86/497 (17%)

Query: 5   KSDFLSILSERGFIHQISNPREL-DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           + +F   L +RG +H +   REL   + ++     Y G D TA SLH GH+   M+L W 
Sbjct: 95  RKNFAQHLEDRGLLHDVVGERELLHKVFTEKRAGMYAGVDPTAPSLHVGHMLPFMVLAWG 154

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSF--------IK 115
              G     ++GG TS +GDP+ R + R  + S   + N+  +                +
Sbjct: 155 YVWGLPVTWVLGGATSRVGDPTGRLKGREQVHSSVRKANMASMHMQLKKLGASIEQYGKR 214

Query: 116 YGTGKTDAL---MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFL 172
           +G  K  A    ++NN TW   + +I++LR++G+   +  ML  E+V++RL +   +SF 
Sbjct: 215 HGYEKKWAWKRSLVNNNTWWNKVPFIEVLRDLGAHMRLGPMLGRETVKNRLSKGDGMSFS 274

Query: 173 EFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKL----------- 221
           EF+Y +LQA+D+  L K    ++Q+GG+DQ+GNI+ G+D  + +                
Sbjct: 275 EFSYPLLQAWDWWVLFKK-GVQVQVGGTDQYGNILFGMDSVKAISKNTAMEQERDPLEND 333

Query: 222 ----FALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT 277
                 LT+PLLT  +G K GK+   AIWL+K+MTS +  +Q++    D  V  + K  T
Sbjct: 334 IDNPIGLTTPLLTAPNGEKFGKSAGNAIWLDKDMTSTFELYQFFVRTPDDVVERYLKMFT 393

Query: 278 TLPMSEIDRMAKLQGKEI--NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS-- 333
            LP+ EI ++ + Q K+     A+  +A E   ++HG++EA+  A    + F     +  
Sbjct: 394 FLPLPEIAKLMEEQNKDPSKRVAQHALAAEFVELIHGKQEADAVALQHRQLFRSRSSTAE 453

Query: 334 -------------------------------------QHMPTISISKDE-VSRGMGLLTL 355
                                                 +MP+I ++  E +  G     +
Sbjct: 454 PTPLQKNSSPPAGHAQSPTSGFVNPQSGNQYAPQTNFSNMPSIQVTLPESLVYGQNFHKI 513

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISN-----EKLQIKL---------QDFDSTGN 401
           +  AG  +S  E  R + +    +  S   +     + L             +DF   GN
Sbjct: 514 LWSAGLVSSKGEGHRIVTNKGAYV-GSRPGDSGPMSDDLAFTPILTWPAEKTKDFIVDGN 572

Query: 402 IK-LSFGKKNHIICHLC 417
           I  L  GK       + 
Sbjct: 573 ILFLKLGKWKFKTVKIV 589


>gi|21244616|ref|NP_644198.1| tyrosyl-tRNA synthetase [Xanthomonas axonopodis pv. citri str. 306]
 gi|81798740|sp|Q8PFT1|SYY_XANAC RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|21110298|gb|AAM38734.1| tyrosyl-tRNA synthetase [Xanthomonas axonopodis pv. citri str. 306]
          Length = 403

 Score =  366 bits (940), Expect = 4e-99,   Method: Composition-based stats.
 Identities = 100/414 (24%), Positives = 167/414 (40%), Gaps = 38/414 (9%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L  L  R              L +   +    G+D TA  LH GH   L  +   Q+ GH
Sbjct: 21  LDQLQAR--------------LATGKPLRVKAGFDPTAPDLHLGHTVLLNKMRQFQQLGH 66

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           + I L+G  T +IGDPS ++ +R+ +  +++  N    +      +     +    +  N
Sbjct: 67  QVIFLIGDFTGMIGDPSGKNATRKPLSREDVLANARTYEEQVFKILDRERTE----VRFN 122

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             W   +   D+++ + +  +V RML  +    R   +Q ++  EF Y ++Q YD V L 
Sbjct: 123 SEWFGQMSAADMIK-LSAQHTVARMLERDDFAKRFGSQQPIAIHEFLYPLVQGYDSVALK 181

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWL 247
            +    +++GG+DQ  N++ G  L E         LT PLL    G  KM K+L   I +
Sbjct: 182 AD----VELGGTDQKFNLLMGRGLQEHYGQAPQIVLTMPLLEGLDGVAKMSKSLGNYIGI 237

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTT-LPMSEIDRMAKLQGK---EINEAKKIIA 303
           N+      +       I DA    +   L+  + M+E  R+ +          E K  +A
Sbjct: 238 NEPA---IDIVTKTMKIGDALTWRWIDLLSFDISMAEAARLKEEVASGELHPREVKLRLA 294

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
            E+ T  H    AE+A             +  +P   +     + G+ L  L+  AG   
Sbjct: 295 RELATRFHDAATAEQAIAGWHAVVTGQGDTGLLPLQEVVVP--AEGLRLAGLLTAAGLTP 352

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           S +EA R LK  A+KI+  ++ +         F       +  GK+N     L 
Sbjct: 353 SNSEATRKLKERAVKIDGEVVEDPGRV-----FTQGFEGVIQVGKRNFARVSLV 401


>gi|238491532|ref|XP_002377003.1| tyrosyl-tRNA synthetase, mitochondrial precursor (tyrosine--tRNA
           [Aspergillus flavus NRRL3357]
 gi|220697416|gb|EED53757.1| tyrosyl-tRNA synthetase, mitochondrial precursor (tyrosine--tRNA
           [Aspergillus flavus NRRL3357]
          Length = 617

 Score =  366 bits (940), Expect = 4e-99,   Method: Composition-based stats.
 Identities = 129/497 (25%), Positives = 217/497 (43%), Gaps = 86/497 (17%)

Query: 5   KSDFLSILSERGFIHQISNPREL-DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           + +F   L +RG +H +   REL   + ++     Y G D TA SLH GH+   M+L W 
Sbjct: 95  RKNFAQHLEDRGLLHDVVGERELLHKVFTEKRAGMYAGVDPTAPSLHVGHMLPFMVLAWG 154

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSF--------IK 115
              G     ++GG TS +GDP+ R + R  + S   + N+  +                +
Sbjct: 155 YVWGLPVTWVLGGATSRVGDPTGRLKGREQVHSSVRKANMASMHMQLKKLGASIEQYGKR 214

Query: 116 YGTGKTDAL---MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFL 172
           +G  K  A    ++NN TW   + +I++LR++G+   +  ML  E+V++RL +   +SF 
Sbjct: 215 HGYEKKWAWKRSLVNNNTWWNKVPFIEVLRDLGAHMRLGPMLGRETVKNRLSKGDGMSFS 274

Query: 173 EFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKL----------- 221
           EF+Y +LQA+D+  L K    ++Q+GG+DQ+GNI+ G+D  + +                
Sbjct: 275 EFSYPLLQAWDWWVLFKK-GVQVQVGGTDQYGNILFGMDSVKAISKNTAMEQERDPLEND 333

Query: 222 ----FALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT 277
                 LT+PLLT  +G K GK+   AIWL+K+MTS +  +Q++    D  V  + K  T
Sbjct: 334 IDNPIGLTTPLLTAPNGEKFGKSAGNAIWLDKDMTSTFELYQFFVRTPDDVVERYLKMFT 393

Query: 278 TLPMSEIDRMAKLQGKEI--NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS-- 333
            LP+ EI ++ + Q K+     A+  +A E   ++HG++EA+  A    + F     +  
Sbjct: 394 FLPLPEIAKLMEEQNKDPSKRVAQHALAAEFVELIHGKQEADAVALQHRQLFRSRSSTAE 453

Query: 334 -------------------------------------QHMPTISISKDE-VSRGMGLLTL 355
                                                 +MP+I ++  E +  G     +
Sbjct: 454 PTPLQKNSSPPAGHAQSPTSGFVNPQSGNQYAPQTNFSNMPSIQVTLPESLVYGQNFHKI 513

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISN-----EKLQIKL---------QDFDSTGN 401
           +  AG  +S  E  R + +    +  S   +     + L             +DF   GN
Sbjct: 514 LWSAGLVSSKGEGHRIVTNKGAYV-GSRPGDSGTMSDDLAFTPILTWPAEKTKDFIVDGN 572

Query: 402 IK-LSFGKKNHIICHLC 417
           I  L  GK       + 
Sbjct: 573 ILFLKLGKWKFKTVKIV 589


>gi|193212254|ref|YP_001998207.1| tyrosyl-tRNA synthetase [Chlorobaculum parvum NCIB 8327]
 gi|193085731|gb|ACF11007.1| tyrosyl-tRNA synthetase [Chlorobaculum parvum NCIB 8327]
          Length = 402

 Score =  366 bits (940), Expect = 4e-99,   Method: Composition-based stats.
 Identities = 95/411 (23%), Positives = 174/411 (42%), Gaps = 26/411 (6%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           ++ + +LS      +++       L +   +   +G D +   LH GH   L  L   Q 
Sbjct: 15  NNTVEVLSTDELEKKLT-----KSLKTGKPLKIKLGADPSRPDLHLGHSVVLRKLREFQD 69

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+ I ++G  T++IGDPS + ++R  + ++E +EN +      S  +          +
Sbjct: 70  LGHEAILIIGDFTAMIGDPSGKSKTRPQLTAEEARENGKSYFEQASKILD----PEKTTI 125

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
             N  WL  + + D++R + S ++V RML  +    R K +  +S  EF Y + Q  D V
Sbjct: 126 CYNADWLGKMSFADVIR-LSSHYTVARMLERDDFEKRYKAQAPISIHEFLYPLAQGMDSV 184

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGA 244
            L  +    +++GG+DQ  N++ G DL           +T PLL    G  KM K+L  A
Sbjct: 185 HLQND----VELGGTDQKFNLLVGRDLQREYGIDPQVCITMPLLVGTDGVEKMSKSLGNA 240

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           I  N    +P + +    +I D  + ++   L          +A+    +  E K+ +A 
Sbjct: 241 ICFN---DTPEDMYGRTLSIPDPLIETYWNLLLPHHSGNDTPVAERVAADPRETKRELAR 297

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E+    +  +EA KA                +PTI          M ++ ++++     S
Sbjct: 298 EVVAQYYSTDEAAKAQEHFDRVIVNKQAPSDLPTIEFE----ETSMPIVEMLMQLKAFPS 353

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            NEARR ++  A++ +   I++    I+         + +  GK+      
Sbjct: 354 KNEARRMIQQGAVQADEQKITDINAVIE----LGENPVIIKAGKRKFFKVK 400


>gi|294666117|ref|ZP_06731375.1| tyrosyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
 gi|292604131|gb|EFF47524.1| tyrosyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
          Length = 404

 Score =  366 bits (940), Expect = 4e-99,   Method: Composition-based stats.
 Identities = 100/411 (24%), Positives = 169/411 (41%), Gaps = 24/411 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG    +   +    L S   +    G+D TA  LH GH   L  +   Q+ GH+ I
Sbjct: 10  LIGRGAEEILKLDQLQARLASGKPLRVKAGFDPTAPDLHLGHTVLLNKMRQFQQLGHQVI 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T +IGDPS ++ +R+ +  +++  N    +      +     +    +  N  W
Sbjct: 70  FLIGDFTGMIGDPSGKNATRKPLSREDVLVNARTYEEQVFKILDRERTE----VRFNSEW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
              +   D+++ + +  +V RML  +    R   +Q ++  EF Y ++Q YD V L  + 
Sbjct: 126 FGQMSAADMIK-LSAQHTVARMLERDDFAKRFGSQQPIAIHEFLYPLVQGYDSVALKAD- 183

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G  L E         LT PLL    G  KM K+L   I +N+ 
Sbjct: 184 ---VELGGTDQKFNLLMGRGLQEHYGQAPQIVLTMPLLEGLDGVAKMSKSLGNYIGINEP 240

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTT-LPMSEIDRMAKLQGK---EINEAKKIIATEI 306
                +       I DA    +   L+  + ++E  R+ +          E K  +A E+
Sbjct: 241 A---IDIVTKTMKIGDALTWRWIDLLSFDISLAEAARLKEQVASGELHPREVKLRLAREL 297

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
            T  H    AE+A             +  +P   +     + G+ L  L+  AG   S +
Sbjct: 298 ATRFHDAATAEQAIAGWHAVVTGQGDTSLLPLQEVVVP--AEGLRLAGLLTAAGLTPSNS 355

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           EA R LK  A+KI+  ++ +         F       +  GK+N     L 
Sbjct: 356 EATRKLKERAVKIDGEVVEDPSRV-----FTQGFEGVIQVGKRNFARVSLV 401


>gi|291276822|ref|YP_003516594.1| tyrosyl-tRNA synthetase [Helicobacter mustelae 12198]
 gi|290964016|emb|CBG39855.1| tyrosyl-tRNA synthetase [Helicobacter mustelae 12198]
          Length = 402

 Score =  366 bits (940), Expect = 4e-99,   Method: Composition-based stats.
 Identities = 111/417 (26%), Positives = 182/417 (43%), Gaps = 33/417 (7%)

Query: 7   DFLSILSERGFIHQISNP---RELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFW 62
           + +  L  RG +  I        +    + G       G+D TA  LH GH   L  L  
Sbjct: 7   EAMQELK-RGSVEFIGEEYIKELVQKYLTNGDRFIVKAGFDPTAPDLHLGHTVLLQKLAT 65

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD 122
            QK G     L+G  T+ IGDPS + E+R+ +  +E+ +N    +      +     +  
Sbjct: 66  FQKFGGSVKFLIGDFTARIGDPSGKSETRKPLSPEEVLQNARTYQEQVFKVLDPCFTE-- 123

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
             +  N  WL  +    ++  + S FSV RML  +    R K  Q +S +EF Y +LQ Y
Sbjct: 124 --VCFNSKWLAELGAEGMI-TLTSHFSVARMLERDDFEKRYKSNQPISMVEFMYPLLQGY 180

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASG-TKMGKT 240
           D V L  +    +++GG+DQ  N++ G  L        +   +T PLL    G  KM K+
Sbjct: 181 DSVALESD----IELGGNDQKFNLLMGRSLQRAYGLKKEQSIMTVPLLEGLDGVQKMSKS 236

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE---INE 297
           L   I + ++  +    +    +I D  +  + + L+   + EI +M K    E      
Sbjct: 237 LKNYIGVTEDSQT---MYAKIMSISDELMWKYYELLSAKSLQEISQMQKNVESEVLHPKL 293

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
           AK+++A EITT  H +E A+ A       F  +   + M T+     E   G  +  ++V
Sbjct: 294 AKELLALEITTRYHNQELAQDAKEVFDNVFSKNHLPKDMDTM-----EFGVGEWICKVLV 348

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            A    ST++ARR +++ AIKIN   +++E  +    D        +  GK+  I  
Sbjct: 349 DAKICPSTSQARREIRAGAIKINQQKLADENHKFAQGD------YIVQMGKRKFIRI 399


>gi|262371199|ref|ZP_06064520.1| tyrosyl-tRNA synthetase [Acinetobacter johnsonii SH046]
 gi|262313929|gb|EEY94975.1| tyrosyl-tRNA synthetase [Acinetobacter johnsonii SH046]
          Length = 410

 Score =  366 bits (940), Expect = 4e-99,   Method: Composition-based stats.
 Identities = 104/420 (24%), Positives = 180/420 (42%), Gaps = 28/420 (6%)

Query: 6   SDFL--SI---LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           S+FL       L +RG    IS    L  L     +    G+D TA  LH GH   +  L
Sbjct: 8   SNFLPAEEQLALIQRGTHEIISEEDLLKKLKENRPLKIKAGFDPTAPDLHLGHTVLINKL 67

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GH    L+G  T++IGDP+ +  +R  +  +++ EN +  +      +     K
Sbjct: 68  KTFQDLGHDVTFLIGDYTAMIGDPTGKSATRPPLSREQVLENAKTYQEQVFKILDPNKTK 127

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N  W       DL+ ++ S  +V RML  +    R    Q ++  EF Y ++Q
Sbjct: 128 ----VRFNSEWFAEKTAADLI-QLASQQTVARMLERDDFTKRYNNHQPIAIHEFLYPLVQ 182

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGK 239
            YD + L    +  +++GG+DQ  N++ G  L  R        +T P+L    G  KM K
Sbjct: 183 GYDSIAL----EADVELGGTDQTFNLLMGRTLQGRYDQEAQVCITVPILEGLDGVNKMSK 238

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINE 297
           +L   I +     +P   +Q   ++ DA +  +   L+   + +I  + K   +G+   E
Sbjct: 239 SLGNYIGV---FDAPGAMYQKVLSMPDALIERYFDLLSFKSVEDIKVLLKEIAEGRNPQE 295

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            KKI+A E+    HG E AE A   A          +  P ++IS+ E    + + T++ 
Sbjct: 296 VKKILALELVERFHGAEAAENAHKGAGNLITEGELPEGTPEVTISRAEFGGELFIATILR 355

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            AG   +   A+  +   A+K++ +++ +    +K         + +  GKK   I  + 
Sbjct: 356 VAGLNPNAAAAKDAVGRGAVKVDWNVV-DMSFSVKE-----NVTLIIQSGKK--AIAKVT 407


>gi|145257280|ref|XP_001401673.1| tyrosyl-tRNA synthetase [Aspergillus niger CBS 513.88]
 gi|134058586|emb|CAK44622.1| unnamed protein product [Aspergillus niger]
          Length = 611

 Score =  366 bits (939), Expect = 4e-99,   Method: Composition-based stats.
 Identities = 131/494 (26%), Positives = 215/494 (43%), Gaps = 83/494 (16%)

Query: 5   KSDFLSILSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           + +F   L ERG +H +   RE LD L ++  V  Y G D TA SLH GH+   M+L W 
Sbjct: 94  RKNFAQHLEERGLLHDVVGERETLDRLFTKKRVGMYAGVDPTAPSLHVGHMLPFMILAWG 153

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSS----FIKYGTG 119
              G     L+GG T+  GDP+ R +SR  + S   + N+  +             YG  
Sbjct: 154 YVWGLPVTFLLGGATARFGDPTGRLKSRDQVHSSVRKANMASMHMQLKKLGHSIDTYGRR 213

Query: 120 KTDAL------MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLE 173
                      ++NN TW  S+  I+LLR++G    +  M+  ++V++RL +   +SF E
Sbjct: 214 HGYINKYWRRALVNNNTWWNSLPVIELLRDLGVHTRLGPMMGRDTVKNRLSKGDGMSFAE 273

Query: 174 FNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT-----PKLF------ 222
           F Y ++QA+D+  L +    ++Q+GGSDQ+GNI+ G+D  + +        + F      
Sbjct: 274 FTYPLMQAWDWWVLFQK-GVQVQVGGSDQFGNILFGMDAVKSIGKNMTDPEQQFDFKDEL 332

Query: 223 ----ALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
                +T+PLLT  SG K GK+   A+WL+K+MTS +  +Q++    D  V  + K  T 
Sbjct: 333 SRPIGITTPLLTAPSGEKFGKSAGNAVWLDKDMTSTFELYQFFVRTPDDVVERYLKMFTF 392

Query: 279 LPMSEIDRMAKLQGKEI--NEAKKIIATEITTMVHGREEAEKAATAAMECF--------- 327
           LP+ EI ++ + Q K+     A+  +A+E   +VHG+ EA+  A    + F         
Sbjct: 393 LPLPEIAKIMEEQNKDPSKRVAQHALASEFVELVHGKVEADAVALQHRQLFRPRLSTAEP 452

Query: 328 -------DMSIHSQ----------------------HMPTISISKDE-VSRGMGLLTLIV 357
                        Q                      +MP ++I+    +     L  ++ 
Sbjct: 453 SPLPRKPSTGGSPQSPTAGFATQESGNPYAPQTNFANMPQVNITLPRSLVYNQTLNKVLW 512

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISN-----EKLQIKL---------QDFDSTGNIK 403
            AG   S +E  R +++    +  S   +     + L             Q+F     + 
Sbjct: 513 SAGLVGSKSEGHRAIENRGAYV-GSRPGDSGQMSDDLAFTPIKVWPAAKTQEFIIGDKLF 571

Query: 404 LSFGKKNHIICHLC 417
           L  GK    I  + 
Sbjct: 572 LKMGKWKFKIVTIV 585


>gi|32266329|ref|NP_860361.1| tyrosyl-tRNA synthetase [Helicobacter hepaticus ATCC 51449]
 gi|81666011|sp|Q7VHY1|SYY_HELHP RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|32262379|gb|AAP77427.1| tyrosyl-tRNA synthetase [Helicobacter hepaticus ATCC 51449]
          Length = 400

 Score =  366 bits (939), Expect = 5e-99,   Method: Composition-based stats.
 Identities = 108/413 (26%), Positives = 180/413 (43%), Gaps = 34/413 (8%)

Query: 15  RGFIHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
           RG +  I     +  L  +            G+D TA  LH GH   L  L   Q+ G  
Sbjct: 12  RGCVEFI-GEEYIRDLVERFYNTGERFCVKAGFDPTAPDLHLGHTVLLQKLATFQRYGGD 70

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
              L+G  T+ IGDPS + E+R+ + +++++ N    K      +          +  N 
Sbjct: 71  VKFLIGDFTATIGDPSGKSETRKPLSAEQVKANALTYKEQVFKVLD----PQYTQICFNS 126

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
            WL  +  + L+  + S FSV RML  +    R    QS+S +EF Y +LQ YD V L  
Sbjct: 127 KWLNELGALGLI-TLTSHFSVARMLERDDFTKRYNNNQSISIVEFIYPLLQGYDSVALN- 184

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASGT-KMGKTLSGAIWL 247
              C +++GG+DQ  N++ G  L    K   +   +T PLL    G  KM K+L+  I +
Sbjct: 185 ---CDIELGGNDQKFNLLVGRSLQRAYKLNKEQSVMTLPLLEGLDGVHKMSKSLNNYIGV 241

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKIIAT 304
            +   +    +    +I+D  +  + + L++L + EI                 K+ +A 
Sbjct: 242 TESANT---MYAKILSINDEMMWRYYELLSSLSLQEIVMLKEQVNTGNAHPKAVKEQLAL 298

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           EITT  H  + A++A  A    F        +   +      + G  +  ++V AG   S
Sbjct: 299 EITTRYHNIDLAKQAKIAFDNVFSKDEIPTDLAVFT-----CNEGEWIARVLVIAGLCES 353

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           T++ARR +++ A+KIN   I NE+L++ +      G   +  GK+      + 
Sbjct: 354 TSQARRDIRAGALKINKEKIMNEELKLSV------GEYIVQIGKRRFAKVIIS 400


>gi|108885117|ref|NP_073125.2| tyrosyl-tRNA synthetase [Mycoplasma genitalium G37]
 gi|97537329|sp|P47693|SYY_MYCGE RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|84626163|gb|AAC72475.2| tyrosyl-tRNA synthetase [Mycoplasma genitalium G37]
 gi|166079005|gb|ABY79623.1| tyrosyl-tRNA synthetase [synthetic Mycoplasma genitalium JCVI-1.0]
          Length = 396

 Score =  366 bits (939), Expect = 5e-99,   Method: Composition-based stats.
 Identities = 144/410 (35%), Positives = 229/410 (55%), Gaps = 20/410 (4%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           ++ L  L ER    Q +   ELD    +     Y+G+D TA+SLH G+   + +   L+ 
Sbjct: 3   NNILQFLKERELYSQANFETELDNHLKEKKNNFYVGFDPTANSLHIGNYVLIHIAKLLKD 62

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH P  ++G  T++IGDP+ R E R+++  +EI +N + IK     F+       D ++
Sbjct: 63  MGHTPHIVLGSATALIGDPTGRIELRKILEEKEIVKNTKTIKKQIKQFL------GDVII 116

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
             N+ WL  + YI+++RE+G+FFSVN+MLS ++  +R   E+ L+ +E NYMILQAYDF 
Sbjct: 117 HENKVWLEKLNYIEVIRELGAFFSVNKMLSTDAFSAR--WEKGLTLMELNYMILQAYDFY 174

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L KN++  LQ+GGSDQW NI+ G +L +R     +F LT+ LL  A+G KMGKT SGA+
Sbjct: 175 YLHKNHNVTLQIGGSDQWANILAGANLIKRKNNASVFGLTANLLVKANGEKMGKTSSGAL 234

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
           WL++  TS ++F+QYW N+DD  +      LT L    ID +  L+G +I + K+++A  
Sbjct: 235 WLDENKTSVFDFYQYWINLDDQSLKKTFLMLTMLDKKVIDELCNLKGPKIKQTKQMLAFL 294

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           IT ++HG ++A++A   +   F         P + I    V     L+  +V+  F  S 
Sbjct: 295 ITELIHGTKKAKEAQQRSELIFSNQ------PDLDIKL--VKTSTNLIDYLVETKFIKSK 346

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +EARR +    + INN  + +    I+ ++        +  GKK+ +   
Sbjct: 347 SEARRLISQKGLTINNKHVLDLNQIIEWKEELQ----IIRKGKKSFLTIK 392


>gi|285017200|ref|YP_003374911.1| tyrosyl-tRNA synthetase [Xanthomonas albilineans GPE PC73]
 gi|283472418|emb|CBA14923.1| probable tyrosyl-trna synthetase protein [Xanthomonas albilineans]
          Length = 403

 Score =  366 bits (939), Expect = 5e-99,   Method: Composition-based stats.
 Identities = 101/411 (24%), Positives = 167/411 (40%), Gaps = 24/411 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG    +        L S   +    G+D TA  LH GH   L  L   Q+ GH+ I
Sbjct: 10  LIGRGADEILKQEALEARLRSGRPLRVKAGFDPTAPDLHIGHTVLLNKLRQFQQLGHQVI 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T +IGDP+ ++ +R+ +  +E+  N    +      +     +    +  N  W
Sbjct: 70  FLIGDFTGMIGDPTGKNATRKPLTREEVLANARTYEEQVFKVLDRARTE----VRFNSEW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
              +   D++R  G   +V RML  +    R   +QS++  EF Y ++Q YD V L  + 
Sbjct: 126 FGQMSAADMIRLAGQH-TVARMLERDDFTKRYAAQQSIAIHEFLYPLVQGYDSVALKAD- 183

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G  L E    P    LT PLL    G  KM K+L   I +N+ 
Sbjct: 184 ---VELGGTDQKFNLLMGRGLQEHYGQPAQIVLTMPLLEGLDGVNKMSKSLGNYIGINEP 240

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTT---LPMSEIDRMAKLQGK-EINEAKKIIATEI 306
                +       I D  +  + + L+    L  +++ R     G     E K  +A E+
Sbjct: 241 A---IDIVTKTMKIGDDLMWRWIELLSFDIGLNEAQMLRQQVQAGSLHPREVKLRLAREL 297

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
            T  H    AE+A             +  +P   +     + G+ +  L+  AG   S +
Sbjct: 298 ATRFHDAVAAEQAIIGWHAVVTGQGDTSVLPLQQLVVP--ADGVRIAALLTAAGLTASNS 355

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           EA R LK  A+++   ++ + +               L  GK+      L 
Sbjct: 356 EATRKLKERAVRVAGEVVEDPQHSFTP-----GFEGVLQVGKRTFARVQLV 401


>gi|71066524|ref|YP_265251.1| tyrosyl-tRNA synthetase [Psychrobacter arcticus 273-4]
 gi|115305820|sp|Q4FQ91|SYY_PSYA2 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|71039509|gb|AAZ19817.1| tyrosyl-tRNA synthetase [Psychrobacter arcticus 273-4]
          Length = 403

 Score =  366 bits (939), Expect = 5e-99,   Method: Composition-based stats.
 Identities = 90/408 (22%), Positives = 179/408 (43%), Gaps = 22/408 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG    +S    +  L     +    G+D TA  LH GH   +  L   Q  GH+  
Sbjct: 14  LIQRGAQEILSEEDLVKKLKLNRPLRIKAGFDPTAPDLHLGHTVLINKLKHFQDLGHEIY 73

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T+ IGDPS ++ +R  +  ++I+ N E         +     K    ++ N  W
Sbjct: 74  FLIGDYTAKIGDPSGKNSTRPPLTDEQIKANAETYAEQVFKILD----KEKTRVVFNSEW 129

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
              +   D++ ++ S  +V+RML  +    R   +  ++  EF Y ++Q YD + L  + 
Sbjct: 130 FNDMSAADMI-QLASHQTVSRMLERDDFSKRYASQTPIAIHEFLYPLVQGYDSIALKAD- 187

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G  L  R    +   +T P+L    G  KM K+L+  + +   
Sbjct: 188 ---VELGGTDQTFNLLMGRTLQGRYGQEQQVCITVPILEGLDGVNKMSKSLNNYVGI--- 241

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATEITT 308
             +P   +Q   ++ D  +  + + L+  PM E++ +      G+   E K+I+A E+  
Sbjct: 242 YDAPGTMYQKLLSMPDTLIRRYFEFLSFKPMEEVENLMAEMEDGRNPQEIKRILAEELIE 301

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
             H  + A  A  +A            +P +++   E    + +  ++ +A  A +++ A
Sbjct: 302 RFHDADAAANAHKSAGNVLADGELPVDLPEVTLEL-EGQDALFITQILNQAALAKNSSSA 360

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +  +K  A+K++  ++ +    +          + +  GKK +    +
Sbjct: 361 KDMIKRGAVKVDGEVV-DAGFSLTA-----GQTVVIQAGKKAYAKVTV 402


>gi|21673398|ref|NP_661463.1| tyrosyl-tRNA synthetase [Chlorobium tepidum TLS]
 gi|81791709|sp|Q8KEW9|SYY_CHLTE RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|21646497|gb|AAM71805.1| tyrosyl-tRNA synthetase [Chlorobium tepidum TLS]
          Length = 406

 Score =  366 bits (939), Expect = 6e-99,   Method: Composition-based stats.
 Identities = 98/393 (24%), Positives = 170/393 (43%), Gaps = 22/393 (5%)

Query: 24  PRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIG 82
            R+L      G  +   +G D +   LH GH   L  L   Q  GH+ I ++G  T++IG
Sbjct: 27  ERKLTKSLKNGTPLKIKLGADPSRPDLHLGHSVVLRKLREFQDLGHEAILIIGDFTAMIG 86

Query: 83  DPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLR 142
           DPS + ++R  + ++E +EN +      S  +          +  N  WL  + + D++R
Sbjct: 87  DPSGKSKTRPQLTAEEARENGKSYFEQASKILD----PEKTTICYNADWLSQMHFADVIR 142

Query: 143 EIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQ 202
            + S ++V RML  +    R + +  +S  EF Y + Q  D V L  +    +++GG+DQ
Sbjct: 143 -LSSHYTVARMLERDDFEKRYRSQTPISIHEFLYPLAQGMDSVHLKND----VELGGTDQ 197

Query: 203 WGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYW 261
             N++ G DL           +T PLL    G  KM K+L  AI  N    +P + +   
Sbjct: 198 KFNLLVGRDLQREYGIEPQVCITMPLLVGTDGSEKMSKSLGNAICFN---DTPEDMYGRT 254

Query: 262 RNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAAT 321
            +I D+ + ++   L          +A+    +  E K+ +A E+    +  EEA KA  
Sbjct: 255 LSIPDSLIETYWNLLVPHHSGNDKPIAERIAADPRETKRELARELVAQYYSAEEAAKAQE 314

Query: 322 AAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINN 381
                         +PT+   +      M ++ L++      S NEARR ++  A++  N
Sbjct: 315 HFDRVIVNKQAPTDLPTVEFEEAT----MPVVELLMALAAFPSKNEARRMIQQGAVQAGN 370

Query: 382 SIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
             IS+    I+L +      + +  GK+     
Sbjct: 371 EKISDINAVIELTE----NPVIIRAGKRKFFKV 399


>gi|291486442|dbj|BAI87517.1| tyrosyl-tRNA synthetase [Bacillus subtilis subsp. natto BEST195]
          Length = 413

 Score =  366 bits (939), Expect = 6e-99,   Method: Composition-based stats.
 Identities = 92/406 (22%), Positives = 182/406 (44%), Gaps = 29/406 (7%)

Query: 19  HQISNPRELDILCSQG-----VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           H++  P EL     +       +   +G D +A  +H GH   L  L   Q+ GH    L
Sbjct: 28  HEVIPPEELKAKLVKSISTGTPLKIKLGLDPSAPDVHLGHTVVLNKLRQFQENGHIVQLL 87

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
           +G  T  IGDP+ +  +R+ +  +E+Q N +     F   +          +  N  WL 
Sbjct: 88  IGDFTGKIGDPTGKSAARKQLTDEEVQHNAKTYFEQFGKVLD----PEKVELHYNSKWLK 143

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDC 193
           ++   D++ E+    +V R++  +    R+  ++ +S  EF Y ++Q YD V L  +   
Sbjct: 144 TLNLEDVI-ELAGKITVARLMERDDFEERIAMQKPISLHEFFYPLMQGYDSVVLESD--- 199

Query: 194 RLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMT 252
            +++GG+DQ  N++ G    ER    K   +  PLL    G  KM K+    I +N+   
Sbjct: 200 -IELGGTDQHFNVLMGRHFQERYNKEKQVVILMPLLEGLDGVEKMSKSKHNYIGINE--- 255

Query: 253 SPYNFWQYWRNIDDADVVSFAKRLTTLPMSE---IDRMAKLQGKEINEAKKIIATEITTM 309
            P + +    ++ D+ +  +    T L + E   + +  +       +AK ++A  I  M
Sbjct: 256 HPNDMYGKTMSLPDSLMKKYIHLATDLELEEKKQLVKDLETGAVHPRDAKMLLAKTIVRM 315

Query: 310 VHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEAR 369
            HG + AE A  +    F  +   + +P ++       + + ++ L+VK    +S +EAR
Sbjct: 316 YHGEKAAEAAEHSFKTVFQENSLPEDIPAVNWKG---EKTIAMIDLLVKLKILSSKSEAR 372

Query: 370 RHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           R +++  ++I+   I++   + ++++     N+ +  GK+  +   
Sbjct: 373 RMIQNGGVRIDGEKITDIHAKAEIRE-----NMIIQVGKRKFLKLQ 413


>gi|21233264|ref|NP_639181.1| tyrosyl-tRNA synthetase [Xanthomonas campestris pv. campestris str.
           ATCC 33913]
 gi|66770222|ref|YP_244984.1| tyrosyl-tRNA synthetase [Xanthomonas campestris pv. campestris str.
           8004]
 gi|188993420|ref|YP_001905430.1| tyrosyl-tRNA synthetase [Xanthomonas campestris pv. campestris str.
           B100]
 gi|81303830|sp|Q4UPQ9|SYY_XANC8 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|81792490|sp|Q8P475|SYY_XANCP RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|21115100|gb|AAM43072.1| tyrosyl-tRNA synthetase [Xanthomonas campestris pv. campestris str.
           ATCC 33913]
 gi|66575554|gb|AAY50964.1| tyrosyl-tRNA synthetase [Xanthomonas campestris pv. campestris str.
           8004]
 gi|167735180|emb|CAP53392.1| unnamed protein product [Xanthomonas campestris pv. campestris]
          Length = 403

 Score =  365 bits (938), Expect = 6e-99,   Method: Composition-based stats.
 Identities = 101/412 (24%), Positives = 174/412 (42%), Gaps = 26/412 (6%)

Query: 12  LSERGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           L  RG   +I    +L+   + G  +    G+D TA  LH GH   L  +   Q+ GH+ 
Sbjct: 10  LIGRGA-EEILKLEQLEARLTSGVPLRVKAGFDPTAPDLHLGHTVLLNKMRQFQELGHQV 68

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           I L+G  T +IGDPS ++ +R+ +  +++  N    +      +     +T   +  N  
Sbjct: 69  IFLIGDFTGMIGDPSGKNVTRKPLSREDVLANARTYEEQVFKILD----RTRTEVRFNSE 124

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           W   +   D+++ + +  +V RML  +    R   +Q ++  EF Y ++Q YD V L  +
Sbjct: 125 WFGQMSAADMIK-LSAQHTVARMLERDDFAKRFAGQQPIAIHEFLYPLVQGYDSVALKAD 183

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNK 249
               +++GG+DQ  N++ G  L E         LT PLL    G  KM K+L   I +N+
Sbjct: 184 ----VELGGTDQTFNLLMGRGLQEHYGQAPQVVLTMPLLEGLDGVAKMSKSLGNYIGINE 239

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTT-LPMSEIDRMAKLQGK---EINEAKKIIATE 305
                 +       I D     +   L+  + ++E  R  +          + K  +A E
Sbjct: 240 PA---IDIVTKTMKIGDTLTWRWIDLLSFDISVAEAARFKEDVAAGNLHPRDVKLRLARE 296

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           + T  H    AE+A             +  +P   +S    + G+ + +L+  AG   S 
Sbjct: 297 LATRFHDAATAEQAIAGWHAVVTGQGDTSVLPLQQVSVP--AEGLRIASLLTAAGLTPSN 354

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           +EA R LK  A+KI+  ++ +   Q     F       +  GK+N     L 
Sbjct: 355 SEATRKLKERAVKIDGEVVDDLARQ-----FGPGFEGVIQVGKRNFARVALV 401


>gi|148244298|ref|YP_001218992.1| tyrosyl-tRNA synthetase [Candidatus Vesicomyosocius okutanii HA]
 gi|146326125|dbj|BAF61268.1| tyrosyl-tRNA synthetase [Candidatus Vesicomyosocius okutanii HA]
          Length = 394

 Score =  365 bits (938), Expect = 6e-99,   Method: Composition-based stats.
 Identities = 95/385 (24%), Positives = 173/385 (44%), Gaps = 26/385 (6%)

Query: 35  VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMM 94
            +    G+D T   LH GH   +  L  LQ  GH+ + L+G  T++IGDP+ + ++R  +
Sbjct: 32  PLRIKAGFDPTTPDLHLGHTVVINKLKQLQNLGHEILFLIGDFTAMIGDPTGKSKTRPPL 91

Query: 95  RSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRML 154
             +++QEN +         +     K    ++ N  W+  +K I+ + ++ S  ++ R+L
Sbjct: 92  SKKQVQENAKSYTKQIFKILD----KNKTKVVFNFQWMDKMKPIEFI-QLASKQTIARIL 146

Query: 155 SFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
             +    R K  QS+S  EF Y ++Q  D VEL  +    +++GG+DQ  N++ G +L +
Sbjct: 147 ERDDFSKRYKSGQSISTHEFLYPLIQGNDSVELQSD----VEVGGTDQKFNLLVGRELQK 202

Query: 215 RLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFA 273
           +    +   LT P+L    G  KM K+L   I +N     P   +    +I D  +  + 
Sbjct: 203 QAGQEQQVILTMPILEGLDGVQKMSKSLDNYIGINA---LPDEMFGKIMSISDDLMWRYF 259

Query: 274 KRLTTLPMSEIDRMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSI 331
           + L+   +  I  + +  +QGK   + K ++A EI T  +  + A++A    +  F  + 
Sbjct: 260 ELLSFQSLEAITNLKQTIVQGKNPRDIKFVLANEIVTRFYKVDVAKEAQQNFINRFSKNQ 319

Query: 332 HSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
               M   S        G+ +  L+   G   ST+ A + +K   +KINN  I+N+  + 
Sbjct: 320 TPNKMNEFS-----FKAGIKIANLLKDTGLCFSTSNAYQMIKQGGVKINNIKITNKNFEP 374

Query: 392 KLQDFDSTGNIKLSFGKKNHIICHL 416
                          GK+      +
Sbjct: 375 PTNTN------VYQVGKRKFARVTI 393


>gi|307720660|ref|YP_003891800.1| tyrosyl-tRNA synthetase [Sulfurimonas autotrophica DSM 16294]
 gi|306978753|gb|ADN08788.1| tyrosyl-tRNA synthetase [Sulfurimonas autotrophica DSM 16294]
          Length = 399

 Score =  365 bits (938), Expect = 6e-99,   Method: Composition-based stats.
 Identities = 103/419 (24%), Positives = 182/419 (43%), Gaps = 36/419 (8%)

Query: 10  SILSE--RGFIHQISNPRELDILC-----SQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
             L E  RG   +I +   ++ L               G+D TA  LH GH   L  L  
Sbjct: 4   EALREINRGC-AEIIDNERIEKLLKAYFQEGKTYMVKAGFDPTAPDLHLGHTVLLQKLAT 62

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD 122
            QK G +   L+G  T+ IGDP+ ++ +R+++  ++I +NIE         +     ++ 
Sbjct: 63  FQKYGARVQFLIGSFTATIGDPTGKNATRKVLSKEDIIKNIESYTTQAFKILD----ESK 118

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
             ++ N+ WL  +   DL+  + S  +V RML  +    R K   +++  EF Y +LQ Y
Sbjct: 119 TDIVYNDDWLGKMSASDLI-SLASNLTVARMLERDDFSKRFKTNVAIATSEFMYPLLQGY 177

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFA-LTSPLLTTASG-TKMGKT 240
           D V L  +    +++GG+DQ  N++ G  L +     K  A L  P+L    G  KM K+
Sbjct: 178 DSVYLKSD----IEIGGTDQKFNLLMGRQLQKAYDIKKQQAVLMMPILEGLDGVQKMSKS 233

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINE 297
           L   I ++     P + +    +I D  +  + + L+   + EI  +     +      +
Sbjct: 234 LGNYIGVS---DKPNDMFGKVLSISDELMWRYFELLSDKSLDEIAELETAVKEGKLHPKK 290

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K+ +A EIT   H +E AE A     +    S     +   S         + +   ++
Sbjct: 291 VKEDLALEITARFHSKEVAENAKVEFDKVHSKSQIPSDIAEFS-----CDGPIWIAKALL 345

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +     ST++ARR +K   +KI+   +S++KL++       +G   L  GK+      +
Sbjct: 346 ECNMEPSTSQARRDIKQGGVKIDQEKVSDDKLELS------SGEYLLQVGKRKFAKLKV 398


>gi|310779543|ref|YP_003967876.1| tyrosyl-tRNA synthetase [Ilyobacter polytropus DSM 2926]
 gi|309748866|gb|ADO83528.1| tyrosyl-tRNA synthetase [Ilyobacter polytropus DSM 2926]
          Length = 405

 Score =  365 bits (937), Expect = 8e-99,   Method: Composition-based stats.
 Identities = 108/409 (26%), Positives = 189/409 (46%), Gaps = 33/409 (8%)

Query: 9   LSILSERGFIHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           + IL  RG + +I + +EL+    +       +   +G D T S LH GH   L  L   
Sbjct: 11  MEILK-RG-VEEIISEKELEDKIKKSLETGKPLVIKLGIDPTGSDLHIGHAVPLRKLRQF 68

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q  GH+   L+G  T+ IGDP+ + E+R+M+ S++IQ NIE         +     +   
Sbjct: 69  QDLGHRVKFLIGTFTARIGDPTGKSETRKMLSSEDIQRNIETYLEQVKLILDLEKTE--- 125

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            ++ N  WL  +   D+L+ + S F+V +M+  E    RL   + +S +EF Y ILQ YD
Sbjct: 126 -VVYNGDWLEKLSLEDVLKLL-SQFTVAQMVQREDFSKRLSEGKPVSLVEFMYPILQGYD 183

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLS 242
            V +    +  +++G ++Q  NI+ G DL +     +   +  P+L    G  KM K+L 
Sbjct: 184 SVAI----EADVELGATEQKFNILRGRDLQKNAGQQQQVCMMMPILVGLDGVEKMSKSLG 239

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAK 299
             I + +   +P + +    +I D  + ++ +  T + + EI  + +          + K
Sbjct: 240 NYIGVTE---APNDMFGKVMSISDDLMWNYYEVATDVALEEIKSLKEGVANGTIHPMDCK 296

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV-K 358
           K +  EI  + H  E  ++A       F     +  +P + I  DE    +  + L+V +
Sbjct: 297 KRLGEEIVKIYHSEEAGKQAREWFENVFSNKNMAVDLPEVKIEADE----INAIDLLVKE 352

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFG 407
             F  ST+EARR +     KIN+  + + K  IK++D      + +  G
Sbjct: 353 LMFLKSTSEARRLISQGGFKINDEAVKDLKAVIKIED-----GMVVRAG 396


>gi|299136282|ref|ZP_07029466.1| tyrosyl-tRNA synthetase [Acidobacterium sp. MP5ACTX8]
 gi|298602406|gb|EFI58560.1| tyrosyl-tRNA synthetase [Acidobacterium sp. MP5ACTX8]
          Length = 430

 Score =  365 bits (937), Expect = 9e-99,   Method: Composition-based stats.
 Identities = 108/388 (27%), Positives = 173/388 (44%), Gaps = 29/388 (7%)

Query: 35  VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMM 94
            +    G+D TA  LH GH   +  L   Q+ GH  I L+G  T++IGDP+ ++++R+ +
Sbjct: 51  PLRIKAGFDPTAPDLHLGHTVLMRKLRHFQQLGHTVIFLIGDSTALIGDPTGKNQTRKPL 110

Query: 95  RSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRML 154
             +EI  N E  K      +     +    +  N  WL  + Y  +++ + + F+V++ML
Sbjct: 111 TREEIDVNAETYKDQVFKILDREKTE----VRYNSEWLDKLGYAGMVK-LAAKFTVSQML 165

Query: 155 SFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
             E    R + EQ +   E  Y + Q YD V L    +C +++GG+DQ  N++ G DL  
Sbjct: 166 EREDFHKRFQEEQPIHVHELLYPMAQGYDSVAL----ECDVELGGTDQKFNLMRGRDLQR 221

Query: 215 RLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFA 273
                    L +P+L    G  KM K+L  AI +          +    +I+D  +  + 
Sbjct: 222 DAGQKPQIILMTPILEGLDGVQKMSKSLGNAIGI---KDPAPEMYGKLMSINDELMWRYW 278

Query: 274 KRLTTLPMSEIDRMAKLQGK---EINEAKKIIATEITTMVHGREEAEKAATAAMECFDMS 330
             LT LP S+ID M +   K      +AKK +A  IT   H   EA+ AA +    F   
Sbjct: 279 TFLTDLPQSQIDAMRESVEKGELHPMQAKKNLAHAITADFHTATEADTAAESWATQFQQK 338

Query: 331 IHSQHMPTISISKD---------EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINN 381
             S+ +P +++S           E +  + +  L+  AG A S  EA R L  NA+ IN 
Sbjct: 339 GVSEDVPEVAVSLSAEGLHASSVEGTSELRIAKLLQLAGLAASAGEATRKLGENAVSING 398

Query: 382 SIISNEKLQIKLQDFDSTGNIKLSFGKK 409
              +     +  +         L  GKK
Sbjct: 399 EKFN--GKTLSKESL--GEAPTLRLGKK 422


>gi|198284765|ref|YP_002221086.1| tyrosyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC 53993]
 gi|198249286|gb|ACH84879.1| tyrosyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC 53993]
          Length = 405

 Score =  365 bits (937), Expect = 9e-99,   Method: Composition-based stats.
 Identities = 95/389 (24%), Positives = 170/389 (43%), Gaps = 24/389 (6%)

Query: 32  SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESR 91
               +   +G D TA  LH GH   L      Q  GH+ + ++G  T++IGDP+ +  +R
Sbjct: 33  DNRPLRIKLGMDPTAPDLHLGHTVLLHKARQFQDLGHRLLFVIGDFTAMIGDPTGKSVTR 92

Query: 92  RMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVN 151
           + +  +E+  N    +      +     +    ++ N  WL +++  +L+ +I + ++V 
Sbjct: 93  KALSREEVVANAATYRRQVFKILDPERTE----VMFNSEWLGALRPEELI-QIAACYTVA 147

Query: 152 RMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGID 211
           RML  +    R    Q ++  EF Y +LQ YD V +  +    +++GG+DQ  N++ G +
Sbjct: 148 RMLERDDFNKRYSANQPIAIHEFLYPLLQGYDSVAIKAD----VELGGTDQRFNLLVGRE 203

Query: 212 LGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVV 270
           L           LT P+L    G  KM K+L   I +      P   +    +I D  + 
Sbjct: 204 LQREYGQKPQLVLTMPILEGLDGVQKMSKSLGNFIAVE---DPPAEMFGKIMSISDFLMW 260

Query: 271 SFAKRLTTLPMSEIDRMAKLQ---GKEINEAKKIIATEITTMVHGREEAEKAATAAMECF 327
            +   L+ +P  E  R+ K      +   + K  +A E+    HG   A++A  A +  F
Sbjct: 261 RYYALLSRVPAVEQTRLQKEAASGARNPRDIKLDLAGELVRRFHGTAAAQEAHIAFLARF 320

Query: 328 DMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNE 387
                 + +P  +I   E  R   L  L+V+   A ST+EA R +K  A++++   + + 
Sbjct: 321 QRHETPEDLPLQAIKLSEAPR---LSQLLVQVHLAASTSEAMRKMKEGAVRVDGERVVDP 377

Query: 388 KLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
              + L          L FGK++     L
Sbjct: 378 ATILAL-----DAVYLLQFGKRHFARVAL 401


>gi|297183411|gb|ADI19544.1| tyrosyl-tRNA synthetase [uncultured gamma proteobacterium
           HF0770_27E13]
          Length = 404

 Score =  365 bits (937), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 107/422 (25%), Positives = 187/422 (44%), Gaps = 25/422 (5%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M +     L I  +RG    +           +  +   +G+D TA  LH GH   +  +
Sbjct: 1   MISKDKQLLEI--KRGTEEILVEKEFAKRFHQKKPLKIKVGFDPTAPDLHLGHTVIINKM 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+ I L+G  T +IGDPS  +E+R ++  ++I +N    +      +     +
Sbjct: 59  RQFQEFGHEIIFLIGDFTGMIGDPSGVNETRPVLTREQIDKNAATYEKQIFKILDKDLTR 118

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N +W+  +    L+ EI S ++V RML  +  + R K    +S  E  Y ++Q
Sbjct: 119 ----IEFNSSWMQQVDSSKLI-EIASKYTVARMLERDDFKQRFKTGNPISIHELLYPLVQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGK 239
           AYD V L    +  +++GG+DQ  N++ G  L +    P   A+T PLL    G  KM K
Sbjct: 174 AYDSVAL----EVDVELGGTDQKFNLLVGRHLQQLYGQPPQTAITLPLLEGLDGVKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINE 297
           T +  I L      P +      +I D  +  + + L+   + EI   +    +GK   +
Sbjct: 230 TANNYIALT---DHPKDMLGKIMSISDELMWRYFELLSARSIDEIGLLQKQVKKGKNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLL---T 354
            K ++A EI    HG++ +  A  + +  F      + + ++SI+  EV    G++    
Sbjct: 287 IKFLLAEEIVERFHGKQSSSDAKESFLRQFQQGQIPEEIKSVSINYSEVESEPGIVNMAK 346

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           L+  A   TS +E  R +K+ ++++    I + +LQ      D+     LSFGK      
Sbjct: 347 LLYSANLVTSVSEGHRAIKAGSVRLEGEKIESSQLQ-----MDANSKHILSFGKHRFAAV 401

Query: 415 HL 416
             
Sbjct: 402 KF 403


>gi|218665375|ref|YP_002427447.1| tyrosyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC 23270]
 gi|218517588|gb|ACK78174.1| tyrosyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC 23270]
          Length = 407

 Score =  365 bits (937), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 95/389 (24%), Positives = 170/389 (43%), Gaps = 24/389 (6%)

Query: 32  SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESR 91
               +   +G D TA  LH GH   L      Q  GH+ + ++G  T++IGDP+ +  +R
Sbjct: 35  DNRPLRIKLGMDPTAPDLHLGHTVLLHKARQFQDLGHRLLFVIGDFTAMIGDPTGKSVTR 94

Query: 92  RMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVN 151
           + +  +E+  N    +      +     +    ++ N  WL +++  +L+ +I + ++V 
Sbjct: 95  KALSREEVVANAATYRRQVFKILDPERTE----VMFNSEWLGALRPEELI-QIAACYTVA 149

Query: 152 RMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGID 211
           RML  +    R    Q ++  EF Y +LQ YD V +  +    +++GG+DQ  N++ G +
Sbjct: 150 RMLERDDFNKRYSANQPIAIHEFLYPLLQGYDSVAIKAD----VELGGTDQRFNLLVGRE 205

Query: 212 LGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVV 270
           L           LT P+L    G  KM K+L   I +      P   +    +I D  + 
Sbjct: 206 LQREYGQKPQLVLTMPILEGLDGVQKMSKSLGNFIAVE---DPPAEMFGKIMSISDFLMW 262

Query: 271 SFAKRLTTLPMSEIDRMAKLQ---GKEINEAKKIIATEITTMVHGREEAEKAATAAMECF 327
            +   L+ +P  E  R+ K      +   + K  +A E+    HG   A++A  A +  F
Sbjct: 263 RYYALLSRVPAVEQTRLQKEAASGARNPRDIKLDLAGELVRRFHGTAAAQEAHIAFLARF 322

Query: 328 DMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNE 387
                 + +P  +I   E  R   L  L+V+   A ST+EA R +K  A++++   + + 
Sbjct: 323 QRHETPEDLPLQAIKLSEAPR---LSQLLVQVHLAASTSEAMRKMKEGAVRVDGERVVDP 379

Query: 388 KLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
              + L          L FGK++     L
Sbjct: 380 ATILAL-----DAVYLLQFGKRHFARVAL 403


>gi|154322040|ref|XP_001560335.1| tyrosyl-tRNA synthetase, mitochondrial precursor [Botryotinia
           fuckeliana B05.10]
 gi|150850414|gb|EDN25607.1| tyrosyl-tRNA synthetase, mitochondrial precursor [Botryotinia
           fuckeliana B05.10]
          Length = 693

 Score =  364 bits (936), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 132/489 (26%), Positives = 222/489 (45%), Gaps = 73/489 (14%)

Query: 2   PAFKSDFLSILSERGFIHQIS-NPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
              K   LSIL ERG++HQI+ +  ELD   ++  + AY+G D TA SLH GHL   M L
Sbjct: 61  TGKKKSMLSILEERGYVHQITGSRDELDRAMTENRLGAYVGVDPTAPSLHVGHLLPFMSL 120

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFI------ 114
           FW+   G+  +SL+GG T+ IGDP+ R  +R  M+S    ENI K+              
Sbjct: 121 FWMYIHGYHTVSLVGGATAKIGDPTDRLTTREKMKSTTRNENILKMHYQLKGIWLNVEAY 180

Query: 115 --KYGTGKTDAL---MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSL 169
             KYG     A    ++NN  W+  +  ++LL+ +G    +  M++ ++V++++     +
Sbjct: 181 GRKYGYQWEWAWRRGLVNNHHWMNKLTVMELLQILGPGMRIGAMIAKDTVKNKMNNGDGM 240

Query: 170 SFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE--------------R 215
           S+ EF+Y +LQ++D+  +       +Q+GGSDQ+GNI  GID  +               
Sbjct: 241 SYSEFSYPLLQSWDWWHMYNTKGITMQIGGSDQYGNITAGIDAVKYILANHPDPVVKEQH 300

Query: 216 LKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKR 275
            K       T PLLTT++G K GK+   A+WL+K+M S ++ + Y+    D DV  + K 
Sbjct: 301 KKAVPPIGFTVPLLTTSAGAKFGKSAGNALWLDKDMMSSFDLYAYFLRTSDQDVERYLKL 360

Query: 276 LTTLPMSEIDRMAKLQGKEI--NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS 333
            T +PM +I++  +   KE    +A+  +A +   ++HG  +A+ A       F  S +S
Sbjct: 361 FTFMPMEQINKTMEEHMKEPHSRKAQHALARDFLELIHGVPDAKAAELKHRLLFSKSSNS 420

Query: 334 QHMPTI---------SISKDEVSRG---------------------MGLLTLIVKAGFAT 363
            ++  +         +++  E   G                       +  ++V AG   
Sbjct: 421 ANVEELQRDLESVEGTVTSGETKTGNINASNRPKADLKLPRSFVMTRSIARIVVAAGLCA 480

Query: 364 STNEARRHLKSNAIKINNSII-----SNEKLQIKL------QD----FDSTGNIKLSFGK 408
           + +EA R   ++ + +  S        ++ L           D          + L  GK
Sbjct: 481 TASEANRLCGASGLYVGGSRPLGYQGKDDALVFTPIKTWKNSDTHHYIIDGSMLVLRRGK 540

Query: 409 KNHIICHLC 417
            N  I  + 
Sbjct: 541 SNIRIIKIV 549


>gi|328788186|ref|XP_624409.2| PREDICTED: probable tyrosyl-tRNA synthetase, mitochondrial-like
           isoform 1 [Apis mellifera]
          Length = 441

 Score =  364 bits (936), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 128/411 (31%), Positives = 209/411 (50%), Gaps = 21/411 (5%)

Query: 26  ELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPS 85
           ++  L        Y G+D TA SLH G+L  L+ L   Q+ GH+ I L+GG T +IGDPS
Sbjct: 29  DIKKLWKSPPQCIYAGFDPTAESLHIGNLLILINLLHWQRCGHEVIILLGGATGLIGDPS 88

Query: 86  FRDESRRMMRSQEIQENIEKIKG----IFSSFIKYGTGKTD----ALMLNNETWLCSIKY 137
           +R + R  +    ++EN+E I+     I  +  +Y     +      +LNN  W   +  
Sbjct: 89  YRKKERVEIDQIILKENLECIRNDIKTIIRNHTQYFCKNHNHLIPIKILNNLQWYKDMNL 148

Query: 138 IDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQM 197
           +  ++++G +F +  ML   SVR+RL+ +  +SF EF Y I Q YD++ L + Y+C  Q+
Sbjct: 149 LSFIKDVGKYFRMGTMLGRTSVRARLESDNGMSFTEFTYPIFQGYDWLHLQRTYNCNFQV 208

Query: 198 GGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNF 257
           GG DQ GNII G DL  +    +++ LT PL+T   G K GK+   AIWL+   +S +  
Sbjct: 209 GGQDQMGNIISGYDLVTKYTKNQVYGLTLPLITAEGGKKFGKSTGNAIWLSPAKSSSFQL 268

Query: 258 WQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKKIIATEITTMVHGREE 315
           +QY+  ++DADV  F    T LP+ +I ++ +      E+  A++ +A ++T +VHG   
Sbjct: 269 YQYFMRVEDADVEKFLHFFTFLPLVKIKKIIEEHFKKPELRIAQRNLAEKVTILVHGEAG 328

Query: 316 AEKAATAAMECFDMSIHSQH----------MPTISISKDEVSRGMGLLTLIVKAGFATST 365
              A  A+   +D SI S            +   ++ +     G+ +  L +KA    S 
Sbjct: 329 LIAAKRASAILYDKSIDSLAKMNANELVQILEGANLIELLSEPGINVYELAMKANCFKSD 388

Query: 366 NEARRHLKSNAIKINNSIISN-EKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            +ARR +++    IN   I+N E++ +      +     L  GKK + I H
Sbjct: 389 YDARRIIEAGGFYINYQKITNMEEVVVPGIHILNNNISLLRVGKKTYHIVH 439


>gi|254459356|ref|ZP_05072777.1| tyrosyl-tRNA synthetase [Campylobacterales bacterium GD 1]
 gi|207083969|gb|EDZ61260.1| tyrosyl-tRNA synthetase [Campylobacterales bacterium GD 1]
          Length = 399

 Score =  364 bits (936), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 105/399 (26%), Positives = 176/399 (44%), Gaps = 29/399 (7%)

Query: 24  PRELDILCSQGVV-TAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIG 82
            + L     +G   T   G+D TA  LH GH   L  L   QK G +   L+G  T+ IG
Sbjct: 23  EKLLKAYFEEGKTYTVKAGFDPTAPDLHLGHTVLLQKLATFQKYGARVQFLIGNFTATIG 82

Query: 83  DPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLR 142
           DP+ +  +R+++  ++I++NI          +     ++   ++ N+ WL  +    +L 
Sbjct: 83  DPTGKSATRKVLSQEDIEKNIVSYTTQAFKILD----ESKTEIVYNKDWLEPLGAAGML- 137

Query: 143 EIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQ 202
           E+ S  +V RML  +    R      ++  EF Y +LQ YD V L  +    +++GG+DQ
Sbjct: 138 ELASTLTVARMLERDDFSKRFTSNTPIAVSEFMYPLLQGYDSVHLKSD----VEIGGTDQ 193

Query: 203 WGNIICGIDLGERLK-TPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQY 260
             N++ G  L +      +   L  P+L    G  KM K+L+  I +  E   P + +  
Sbjct: 194 KFNLLMGRQLQKTYDVKKQQAVLMMPILEGLDGVQKMSKSLNNYIGVTDE---PNDMFGK 250

Query: 261 WRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKIIATEITTMVHGREEAE 317
             +I D  +  F + L+T  + EI  +    +       + K+ +A EIT   H  E A+
Sbjct: 251 VLSISDDLMWRFYELLSTKSLEEIATIKSGVEDGSLHPKKVKENLAIEITARFHNDELAQ 310

Query: 318 KAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAI 377
            A       F+       +PT  I +      + +   +V      ST++ARR +K  A+
Sbjct: 311 NAKEE----FEKVHAKSQIPT-EIEEFSCDGEIWIAQALVDCNIEPSTSQARRDIKQGAV 365

Query: 378 KINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           KIN   IS+ +LQ+       TG   L  GK+      +
Sbjct: 366 KINQEKISDIQLQLS------TGEYILQVGKRKFAKLKV 398


>gi|114645375|ref|XP_001135134.1| PREDICTED: hypothetical protein isoform 1 [Pan troglodytes]
          Length = 456

 Score =  364 bits (936), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 133/424 (31%), Positives = 198/424 (46%), Gaps = 35/424 (8%)

Query: 13  SERGFIHQISNPR----ELDILCSQG----VVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
             RG             EL  L  +G      T Y G+D TA SLH GHL  L+ LF LQ
Sbjct: 43  KARGLFKDFFPETGTKIELPELFDRGTASFPQTIYCGFDPTADSLHVGHLLALLGLFHLQ 102

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + GH  I+L+GG T+ +GDPS                 +E +          G       
Sbjct: 103 RAGHNVIALVGGATARLGDPSG--------------LGLEALAANHQQLFTDGRSWGSFT 148

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           +L+N  W    + +D L  +G  F +  +LS +SV+ RLK  + +S  EF Y +LQAYDF
Sbjct: 149 VLDNSAWYQKQRLVDFLAAVGGHFRMGTLLSRQSVQLRLKSPEGMSLAEFFYQVLQAYDF 208

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L + Y CR+Q+GGSDQ GNI+ G +   +L    +F +T PL+T+ +G K+GK+   A
Sbjct: 209 YYLFQRYGCRVQLGGSDQLGNIMSGYEFINKLTGEDVFGITVPLITSTTGAKLGKSAGNA 268

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKII 302
           +WLN++ TSP+  +Q++    D  V  + K  T LP+ EID + +L  KE      +K +
Sbjct: 269 VWLNRDKTSPFELYQFFVRQPDDSVERYLKLFTFLPLPEIDHIMQLHVKEPERRGPQKRL 328

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHM----------PTISISKDEVSRGMGL 352
           A E+T +VHGRE  + A       +  SI +  +               S+  +  G  +
Sbjct: 329 AAEVTKLVHGREGLDSAKRCTQALYHSSIDALEVMSDQELKELFKEAPFSEFFLDPGTSV 388

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEK-LQIKLQDFDSTGNIKLSFGKKNH 411
           L    KA          R +    + IN+  ++N + + I  Q     G   L  GK+N 
Sbjct: 389 LDTCRKANAIPDGPRGYRMITEGGVSINHQQVTNPESVLIVGQHILKNGLSLLKIGKRNF 448

Query: 412 IICH 415
            I  
Sbjct: 449 YIIK 452


>gi|297172919|gb|ADI23880.1| tyrosyl-tRNA synthetase [uncultured gamma proteobacterium
           HF4000_48J03]
          Length = 404

 Score =  364 bits (936), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 108/422 (25%), Positives = 189/422 (44%), Gaps = 25/422 (5%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M +     L I  +RG    +           +  +   +G+D TA  LH GH   +  +
Sbjct: 1   MISKDKQLLEI--QRGTEEILVEEEFTKRFHQKKPLKIKVGFDPTAPDLHLGHTVIINKM 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+ I L+G  T +IGDPS  +E+R ++  ++I EN    +      +     +
Sbjct: 59  RQFQEFGHEIIFLIGDFTGMIGDPSGVNETRPVLTREQIDENAATYEKQIFKILDKDLTR 118

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N +W+  +    L+ EI S ++V RML  +  ++R K    +S  E  Y ++Q
Sbjct: 119 ----IEFNSSWMQQVNSSKLI-EIASKYTVARMLERDDFKNRFKTGNPISIHELLYPLVQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGK 239
           AYD V L    +  +++GG+DQ  N++ G  L +    P   A+T PLL    G  KM K
Sbjct: 174 AYDSVAL----EADVELGGTDQKFNLLVGRHLQKLYGQPPQTAITLPLLEGLDGVKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINE 297
           T +  I L     SP +      +I D  +  + + L+   + EI   +    +GK   +
Sbjct: 230 TANNYIALT---DSPRDMLGKIMSISDELMWRYFELLSARSLDEIGLLQKQVKKGKNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLL---T 354
            K ++A EI    HG++ ++ A  + +  F      + + ++SI+  EV    G++    
Sbjct: 287 IKFLLAEEIVERFHGKQSSDDAKASFLRQFQQGQMPEEIKSVSINYSEVESEPGIVNMAK 346

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           ++  A   TS +E  R +K+ ++++    I   +LQ      D+     LSFGK      
Sbjct: 347 VLYLANLVTSVSEGHRAIKAGSVRLEGEKIERSQLQ-----MDANSRHILSFGKHRFAKV 401

Query: 415 HL 416
             
Sbjct: 402 EF 403


>gi|320332623|ref|YP_004169334.1| Tyrosyl-tRNA synthetase [Deinococcus maricopensis DSM 21211]
 gi|319753912|gb|ADV65669.1| Tyrosyl-tRNA synthetase [Deinococcus maricopensis DSM 21211]
          Length = 407

 Score =  364 bits (936), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 94/421 (22%), Positives = 174/421 (41%), Gaps = 25/421 (5%)

Query: 1   MPAFKSDF--LSILS--ERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQ 56
           M   + +   L  L+  +RG +  ++       L     +   +G D T   LH GH   
Sbjct: 1   MTDIRRNVPVLEQLAVLKRGVVDLVTEEDLKTKLERGTPLRVKLGADPTRPDLHLGHAVI 60

Query: 57  LMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY 116
           L  +   Q  GHK I L+G  T++IGDPS + ++R  +  +E + N           ++ 
Sbjct: 61  LRKMRQFQDLGHKVIMLIGDFTAMIGDPSGKSKTRPPLTLEETRANAVSYLEQCKLVLRS 120

Query: 117 GTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNY 176
                +  +  N  WL  + Y D++R + S ++V R+L  +    RL     +   E  Y
Sbjct: 121 DPEVLE--VRFNGEWLEPMGYADIIR-LASKYTVARILERDDFTKRLAAGTPVQMHELLY 177

Query: 177 MILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT- 235
            + Q YD V L    +  +++GG+DQ  N + G  L           +T PLL    G  
Sbjct: 178 PLTQGYDSVAL----EADVELGGTDQLFNNLVGRALQRDYGQAAQVVMTLPLLVGLDGVE 233

Query: 236 KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI 295
           KM K+L   I L  E    +  +     + D  ++++   LT L  + I+    L     
Sbjct: 234 KMSKSLDNYIGLTDEA---HEMFAKLMKVPDTLLLNYFTLLTDLSEARIEE---LLAGHP 287

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG--MGLL 353
             A + +A  +T  +H   + + A              +++P++++  +E++    +GL 
Sbjct: 288 VTAHRELARAVTAWLHPEADLDAAEERYKAV-AKGGIPENIPSVTVPTEELNADGVVGLF 346

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            L+  AG   S   AR+ +++  +K+N    ++ +  +          + L  GK   + 
Sbjct: 347 RLVALAGLEPSNGAARKLIQNRGLKVNGEAATDPQTAVT----IPAEGLVLQKGKDKFVR 402

Query: 414 C 414
            
Sbjct: 403 L 403


>gi|254779253|ref|YP_003057358.1| tyrosyl-tRNA synthetase [Helicobacter pylori B38]
 gi|254001164|emb|CAX29123.1| Tyrosyl-tRNA synthetase (Tyrosine--tRNA ligase) (TyrRS)
           [Helicobacter pylori B38]
          Length = 402

 Score =  364 bits (936), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 104/426 (24%), Positives = 193/426 (45%), Gaps = 35/426 (8%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLT 55
           M    S  L  +  RG  ++I     ++ L  +            G+D TA  LH GH  
Sbjct: 1   MEQKISIALKEIK-RGA-NEIIGLEYIEKLVRKYYKTNERFIVKAGFDPTAPDLHLGHTV 58

Query: 56  QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK 115
            +  L  LQ+ G +   L+G  T++IGDP+ ++E+R+ +  +++ EN +  +      + 
Sbjct: 59  LIQKLALLQQYGARVKFLIGDFTAMIGDPTGKNETRKPLNREQVLENAKTYEEQIYKILD 118

Query: 116 YGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFN 175
               +    +  N  WL ++    ++ E+ + FSV RML  +    R K  + +S +EF 
Sbjct: 119 ----EKHTEVCFNSAWLDALGAKGMI-ELCAKFSVARMLERDDFAKRYKENRPISIVEFL 173

Query: 176 YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASG 234
           Y +LQ YD V +  +    +++GG+DQ  N++ G  L        +   +T PLL    G
Sbjct: 174 YPLLQGYDSVAMDAD----IELGGNDQKFNLLVGRFLQRSYGLNKEQSVITMPLLEGLDG 229

Query: 235 -TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK---L 290
             KM K+L   + + +E   P   +    ++ D  +  +   L+   + EI+ +      
Sbjct: 230 VQKMSKSLGNYVGITEE---PNAMFGKIMSVSDDLMWRYYTLLSAKTLEEIEDLKHGILN 286

Query: 291 QGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGM 350
           Q       K+ +A EI    +  E+A KA     + F  ++  +      +S+ +   G+
Sbjct: 287 QTLHPKAVKEELAGEIVARYYDNEQAIKAKEQFSKVFSANLLPE-----ILSESDFDEGV 341

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
           G+L ++ + GF  ST++ARR ++   +KIN  +I +E  +         GN  +  GKK 
Sbjct: 342 GILDVLKQIGFCPSTSQARRDIQGGGVKINQEVIKDESYRFVK------GNYVIQLGKKR 395

Query: 411 HIICHL 416
            +  ++
Sbjct: 396 FMKLNI 401


>gi|294155347|ref|YP_003559731.1| tyrosine--tRNA ligase [Mycoplasma crocodyli MP145]
 gi|291600388|gb|ADE19884.1| tyrosine--tRNA ligase [Mycoplasma crocodyli MP145]
          Length = 410

 Score =  364 bits (936), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 133/421 (31%), Positives = 228/421 (54%), Gaps = 25/421 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + L  L  RG ++ ISN  +   L  +G    Y G+D TA SLH G+   ++ L   +K 
Sbjct: 2   NILDDLKARGILNNISNEEKF--LSLKGEPRVYSGFDPTAKSLHLGNYIVILNLLRFKKY 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           G KP +L+GG T +IGDPSF+D  R ++  + + EN  KI+     F           ++
Sbjct: 60  GFKPYALIGGATGMIGDPSFKDSERSLLDEKTVLENKTKIRRQLEKF--------GLQVV 111

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           +N  +  ++  +D LR +G   +V+ ML+ +SV SR++R   LSF EF+Y ++Q YDF +
Sbjct: 112 DNYDFYKNMSVLDFLRNVGKLLNVSYMLAKDSVASRIER--GLSFTEFSYQLIQGYDFYK 169

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLLTTASGTKMGKT-LSGA 244
           L  +    +Q GGSDQWGN+  G+++  +LK+  K  A+   LLT +SG K GK+   G+
Sbjct: 170 LNVDEQVEVQCGGSDQWGNLTAGLEIINKLKSENKAVAVALNLLTDSSGNKFGKSTGGGS 229

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE--INEAKKII 302
           +WL+KEM SPYN +Q+  N  D++V    K LT + ++EI+++     +   ++ A++++
Sbjct: 230 LWLDKEMNSPYNLYQFLLNQPDSEVEKLLKWLTLIDINEINKIINKHNENAKLHYAQEVL 289

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIH--SQHMPTISISKD-----EVSRGMGLLTL 355
           A  + + VH + +AEKA       FD ++   +  +  I I KD     E+ +G  L+  
Sbjct: 290 AFTVVSDVHSKNDAEKAKKLTSILFDKNLDVNTLTIDDIEIMKDGVELIEIKKGQNLVDE 349

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +++    +S  EAR  + +N++K+N   +++    +      S     +  GKK   +  
Sbjct: 350 LIRIKVVSSKREAREFITTNSLKLNQEPVND--QTLVHSKLFSNKFAIIHKGKKQLYLAK 407

Query: 416 L 416
           +
Sbjct: 408 I 408


>gi|210134976|ref|YP_002301415.1| tyrosyl-tRNA synthetase [Helicobacter pylori P12]
 gi|210132944|gb|ACJ07935.1| tyrosyl-tRNA synthetase [Helicobacter pylori P12]
          Length = 402

 Score =  364 bits (936), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 105/426 (24%), Positives = 195/426 (45%), Gaps = 35/426 (8%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLT 55
           M    S  L  +  RG  ++I     ++ L  +            G+D TA  LH GH  
Sbjct: 1   MEQKVSIALKEIK-RGA-NEIIGLEYIEKLVRKYYETNERFIVKAGFDPTAPDLHLGHTV 58

Query: 56  QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK 115
            +  L  LQ+ G +   L+G  T++IGDP+ ++E+R+ +  +++ EN +  +      + 
Sbjct: 59  LIQKLALLQQYGARVKFLIGDFTAMIGDPTGKNETRKPLNREQVLENAKTYEEQIYKILD 118

Query: 116 YGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFN 175
               +    +  N TWL ++    ++ E+ + FSV RML  +    R K  + +S +EF 
Sbjct: 119 ----EKHTEVCFNSTWLDALGAKGMI-ELCAKFSVARMLERDDFTKRYKENRPISIVEFL 173

Query: 176 YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASG 234
           Y +LQ YD V +  +    +++GG+DQ  N++ G  L        +   +T PLL    G
Sbjct: 174 YPLLQGYDSVAMDAD----IELGGNDQKFNLLVGRFLQRSYGLNKEQSVITMPLLEGLDG 229

Query: 235 -TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK---L 290
             KM K+L   + + +E   P   +    ++ D  +  +   L+T  + EI+ +      
Sbjct: 230 VQKMSKSLGNYVGITEE---PNAMFGKIMSVSDDLMWRYYTLLSTKTLEEIEDLKHGILN 286

Query: 291 QGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGM 350
           Q       K+ +A EI    +  ++A KA     + F  ++  +      +S+ +   G+
Sbjct: 287 QTLHPKAVKEDLAGEIVARYYDNDQAFKAKEQFSKVFSANLLPE-----ILSESDFDEGV 341

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
           G+L ++ + GF  ST++ARR ++   +KIN  +I +E  +         GN  +  GKK 
Sbjct: 342 GILDVLKQIGFCPSTSQARRDIQGGGVKINQEVIKDESYRFVK------GNYVIQLGKKR 395

Query: 411 HIICHL 416
            +  ++
Sbjct: 396 FMKLNI 401


>gi|116328275|ref|YP_797995.1| tyrosyl-tRNA synthetase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116331000|ref|YP_800718.1| tyrosyl-tRNA synthetase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
 gi|116121019|gb|ABJ79062.1| Tyrosine--tRNA ligase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116124689|gb|ABJ75960.1| Tyrosine--tRNA ligase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
          Length = 405

 Score =  364 bits (936), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 102/411 (24%), Positives = 181/411 (44%), Gaps = 25/411 (6%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            +  RG +  IS       L  +  +    G+D TA  LH GH  QL  L   Q  GH+ 
Sbjct: 8   EIIRRGTVDLISEDELKSKLQKKKALKIKAGFDPTAPDLHLGHFVQLKKLKHFQDLGHEV 67

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
             L+G  T++IGDP+ + E+R+ +  +E+ EN +  +      +     +    ++ N +
Sbjct: 68  FFLLGDFTAMIGDPTGKSETRKRLSKEEVLENSKTYQSQVFKVLDPAKTR----IVYNSS 123

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           W   + + D+L  + S ++V RML  +    R K    +S +EF Y ++Q YD V +   
Sbjct: 124 WCSGMNFEDVL-VLSSKYNVARMLERDDFNKRYKAGHPISMIEFLYPLVQGYDSVAM--- 179

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNK 249
            +C +++GG+DQ  N++ G DL           LT PLL    G  KM K+L   + + +
Sbjct: 180 -ECDVELGGTDQKFNLLVGRDLQREYGKEVQCVLTLPLLVGLDGNKKMSKSLGNYVGITE 238

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK---LQGKEINEAKKIIATEI 306
               P + +    +I D  + ++ + LT LP+SEI+        +     E K  +A  I
Sbjct: 239 ---VPIDMFGKLMSISDDLMWNYFELLTDLPLSEIEVRKNGIVNKELHPKEVKIELAKLI 295

Query: 307 TTMVHGREEAEKAATAAMECFD--MSIHSQHMPTISISKDEVSRGMG--LLTLIVKAGFA 362
              +    E E+A     +  +         +  + + ++  S      L+ ++ K  F 
Sbjct: 296 MDQLSSPSENEEAIEEWKKIHNPKSRAIPDDIREVKLGEEFFSETPEPLLVWVLSKLSFV 355

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            S +E RR +K+  + +    I++EK  I+           +  GKK   +
Sbjct: 356 PSVSEGRRLIKAGGLYLFEDKITDEKFAIQ-----KDKEYLIRQGKKGKFL 401


>gi|237807358|ref|YP_002891798.1| tyrosyl-tRNA synthetase [Tolumonas auensis DSM 9187]
 gi|237499619|gb|ACQ92212.1| tyrosyl-tRNA synthetase [Tolumonas auensis DSM 9187]
          Length = 399

 Score =  364 bits (935), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 100/421 (23%), Positives = 183/421 (43%), Gaps = 26/421 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M   ++    I  +RG    +     +  L     +   +G D TA  +H GH   L  L
Sbjct: 1   MSELETALAEI--KRGAEEILVEEELIAKLKEGRPLRIKLGMDPTAPDIHLGHTVILNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GH+ I L+G  T+++GDPS ++ +R  +  + I+ N           +     +
Sbjct: 59  RTFQDLGHEVILLIGDFTALVGDPSGKNATRPPLSEEAIKINALTYAEQAFKILDPARTR 118

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N TWL  +    +++ + +  +V RML  +  + R    QS++  EF Y +LQ
Sbjct: 119 ----IEYNSTWLKELGATGMIK-LAAKQTVARMLERDDFKKRYANGQSIAIHEFLYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGK 239
            YD V L  +    +++GG+DQ  N++ G +L +    P    L  PLL    G  KM K
Sbjct: 174 GYDSVALKAD----VELGGTDQKFNLLMGRELQKDAGQPAQCVLMMPLLVGLDGVKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EIN 296
           +    I ++    +P + +    +I D  + S+ + L+T P++EI +             
Sbjct: 230 SSGNYIGVH---DAPNDMFGKIMSISDELMWSYYELLSTRPLAEITQFKADIAANKLNPR 286

Query: 297 EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLI 356
           + K  +A E+    H    AE A     + F  +     MP ++++    + G+ +  L+
Sbjct: 287 DVKIWLAKELIARYHDEAAAEAAHNDFTQRFSKNAIPDEMPEVTVAAP--AEGIAVGNLL 344

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            +A    +T+EA R +K NA+K +  ++++ KL +        G      GK+      +
Sbjct: 345 KEAALVETTSEALRMIKQNAVKRDGEVVADGKLLVTA------GTAVWQVGKRKFARITV 398

Query: 417 C 417
            
Sbjct: 399 A 399


>gi|307128554|ref|YP_003880584.1| tyrosyl-tRNA synthetase [Candidatus Sulcia muelleri CARI]
 gi|306483016|gb|ADM89886.1| tyrosyl-tRNA synthetase [Candidatus Sulcia muelleri CARI]
          Length = 425

 Score =  364 bits (935), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 149/416 (35%), Positives = 223/416 (53%), Gaps = 24/416 (5%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
            + +  L  RG IH  +   ++       ++T Y G+D T  SLH G+L  +++L   QK
Sbjct: 2   KNLIKELFWRGLIHDSTYNEQIK----NEIITLYTGFDPTYKSLHIGNLVAIIMLIHFQK 57

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            G+  IS++GGGT IIGDPS ++  R +++ + +  NI  I+   S +I +   K++  +
Sbjct: 58  YGNNIISVIGGGTGIIGDPSGKNSERNLIKKELLNYNIRNIRKQLSLYIDFNFKKSE--I 115

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           LNN  WL    +ID +R+IG  FS+N ML+ +S++ R+  ++S+SF EF Y +LQAYDF 
Sbjct: 116 LNNYEWLKKNLFIDFVRDIGKSFSINYMLTKDSIKKRISNKKSISFTEFTYQLLQAYDFF 175

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG-A 244
            L K   C LQ+GGSDQWGNI  GI+L  +    K+  LT PL+T   G+K GKT +G  
Sbjct: 176 YLYKKKKCSLQIGGSDQWGNITSGIELIRKKLGVKVNGLTFPLITKLDGSKFGKTENGEN 235

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKII 302
           IW++  +TSPY F+Q+W NI D     + K  T L   EI  +     K+      +K I
Sbjct: 236 IWIDPNLTSPYEFYQFWINITDDQAKKYIKIYTFLKKEEIKEIIDNHEKKPKLKLIQKKI 295

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHS------------QHMPTISISKDEVSRGM 350
           A+EIT  +HG+E   K    +   F                  +++P   I     +  +
Sbjct: 296 ASEITIFIHGKEIFNKVKLISNILFKKEKSIKKISKKDIIYIYKYIPHKKIYIYN-NFNI 354

Query: 351 GLLTLIV-KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLS 405
            +L L+V K+ F  S  +A RHLK N+I IN   I +EK  +K  D  S   + L 
Sbjct: 355 PILDLLVNKSNFLKSKKKAIRHLKLNSILIN-KKIVDEKFILKKNDLISESYVLLQ 409


>gi|322437050|ref|YP_004219262.1| tyrosyl-tRNA synthetase [Acidobacterium sp. MP5ACTX9]
 gi|321164777|gb|ADW70482.1| tyrosyl-tRNA synthetase [Acidobacterium sp. MP5ACTX9]
          Length = 424

 Score =  364 bits (935), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 101/413 (24%), Positives = 174/413 (42%), Gaps = 38/413 (9%)

Query: 19  HQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
            +I    +L             +    G+D TA  LH GH   +  L   Q+ GH  I L
Sbjct: 21  AEIIPLDDLRTRLEASLKSGKPLRVKAGFDPTAPDLHLGHTVLMRKLRHFQQLGHTVIFL 80

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
           +G  T++IGDP+ + ++R+ +   EI  N E  K      +     ++   +  N  WL 
Sbjct: 81  IGDSTALIGDPTGKSQTRKQLTQAEIDANAETYKQQVFRILD----ESKTEVRYNSEWLA 136

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDC 193
            + + D++R + +  +V++ML  E    R   E+ +S  E  Y + Q YD V L    +C
Sbjct: 137 KLGFADMIR-LAAKATVSQMLEREDFHQRFNNEEPISLHELLYPLAQGYDSVAL----EC 191

Query: 194 RLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMT 252
            +++GG+DQ  N++ G  L           L +P+L    G  KM K+L  A+ +     
Sbjct: 192 DVELGGTDQKFNLLMGRRLQRDAGQLPQIVLMTPILEGLDGVQKMSKSLGNAVGVE---D 248

Query: 253 SPYNFWQYWRNIDDADVVSFAKRLTTLPMSE---IDRMAKLQGKEINEAKKIIATEITTM 309
           SP++ +     I DA +  +   LT L  ++   I+           +AK+ +A  I   
Sbjct: 249 SPFDMFTKLMTIPDALIGRYFTFLTDLLPAQIAVIEEQIVAGQLHPMQAKRDLARTIVEG 308

Query: 310 VHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-------------MGLLTLI 356
            H  E A  A     + F     S  +  + I++ E++               + L  L+
Sbjct: 309 FHTLEVAAHAEENWSKQFQQGGVSDDIEEVGITQAEIAGPEAHNAQDGVTGFTIKLPPLL 368

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
           V  G   S +EA R L+  A+KI+  +  +  +Q+          + +  GKK
Sbjct: 369 VHCGLCPSNSEATRKLREGAVKIDGEVQKDAVMQLAS----LPVTLTIRLGKK 417


>gi|121609599|ref|YP_997406.1| tyrosyl-tRNA synthetase [Verminephrobacter eiseniae EF01-2]
 gi|121554239|gb|ABM58388.1| tyrosyl-tRNA synthetase [Verminephrobacter eiseniae EF01-2]
          Length = 410

 Score =  364 bits (935), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 106/413 (25%), Positives = 180/413 (43%), Gaps = 30/413 (7%)

Query: 11  ILSERGFIHQISNPRELDILCSQG----VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
            +S RG    +     +  L         +   +G D TA  +H GH   L  L  LQ  
Sbjct: 20  EISLRGAHELLPQDEWVKKLVRSEATGQPLRIKLGLDPTAPDIHLGHTVVLNKLRQLQDL 79

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+ I L+G  TS+IGDPS R+ +R  +  ++IQ N E      S  +     +    + 
Sbjct: 80  GHQVIFLIGDFTSLIGDPSGRNHTRPALTPEQIQANAETYYRQASLVLDPARTE----IR 135

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
            N  W   +    ++R + + ++V RM+  E    R    QS+S  EF Y ++Q YD V 
Sbjct: 136 YNSEWSEPLGAQGMIR-LAAMYTVARMMEREDFHKRYTTGQSISVHEFLYPLMQGYDSVA 194

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAI 245
           L  +    L++GG+DQ  N++ G  L           LT PLL    G  KM K+ +  I
Sbjct: 195 LKSD----LELGGTDQKFNLLMGRHLQHEHGQEPQCVLTMPLLVGLDGVDKMSKSKNNYI 250

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIA 303
            + +   +    +    +I D  +  +   L+   ++ I   +     G+   +AK ++A
Sbjct: 251 AITESANT---MYAKLLSIPDTLMWDWYPLLSWRSLAGIAALKAEVAGGRNPKDAKVLLA 307

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
            EIT   HG   A+ A    +           +  +++S   +  G+    L+ +AG A 
Sbjct: 308 KEITARFHGAAAADAAEQDFIVR-SQGGVPDAIAALTLSGAPLGIGV----LLRQAGLAP 362

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           ST+EA R +  N ++++ S++S++ L++        G   L  GK+      L
Sbjct: 363 STSEAHRLIDGNGVRVDGSLVSDKGLKL------GAGTYVLQVGKRRFARVTL 409


>gi|254572493|ref|XP_002493356.1| Mitochondrial tyrosyl-tRNA synthetase [Pichia pastoris GS115]
 gi|238033154|emb|CAY71177.1| Mitochondrial tyrosyl-tRNA synthetase [Pichia pastoris GS115]
 gi|328352627|emb|CCA39025.1| tyrosyl-tRNA synthetase [Pichia pastoris CBS 7435]
          Length = 494

 Score =  364 bits (935), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 135/446 (30%), Positives = 223/446 (50%), Gaps = 36/446 (8%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L+ L +RG + Q ++  EL  LCS+  ++ Y G D +A SLH G+L  LM+L      G
Sbjct: 47  ILNHLKKRGLLSQCTHEPELSQLCSKRRLSLYCGADPSARSLHIGNLLPLMVLLHFNLRG 106

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY----------- 116
           H    L+GG T  +GDPS R+  R  ++ +E + N+E I+    SF +            
Sbjct: 107 HNIFPLVGGATGKVGDPSGRETERTEIQHEERESNVENIRKQMKSFFRRGVTFAHRRNQL 166

Query: 117 --GTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEF 174
                    ++ NN  W  +I+ +D L   G F  VN+ML+ ES++ RL     + F EF
Sbjct: 167 FKDVEPGTQMLKNNIEWWENIRILDFLSTYGKFIKVNQMLARESIKKRLNSGMGIGFNEF 226

Query: 175 NYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK---------LFALT 225
            Y ILQA+DF  L KN++ ++Q+GG+DQ+GNI+ GID   RL   K          F +T
Sbjct: 227 TYQILQAFDFFVLYKNHNVQIQVGGNDQYGNIVAGIDFISRLHRNKADNAVHAPGAFGIT 286

Query: 226 SPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID 285
            PLLTT++G K GK+   A++++K MT  Y  +QY  N+ D DV  F  + + LP+S ID
Sbjct: 287 VPLLTTSTGEKFGKSAGNAVFIDKYMTPSYQLYQYMINLSDGDVERFLNKFSLLPLSVID 346

Query: 286 RM--AKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISK 343
           ++     Q K+    +KI+A E+  ++HG+ E       +   F   ++   +  +   +
Sbjct: 347 KIVLKHKQNKKQRIGQKILAVELCDLIHGQGEGISNLIISETLFGGFLNFNTLEILEAFR 406

Query: 344 DE---------VSRGMGLLTLIVKA-GFATSTNEARRHLKSNAIKIN--NSIISNEKLQI 391
            +         +   + +L ++        S  E ++ +K  ++ +   N+ I +  L+I
Sbjct: 407 KQGLLKTYKACMIENLSILNVLEDIYRQQKSRTELKKLIKGGSVSLGVKNTRIFDSDLRI 466

Query: 392 KLQDFDSTGNIKLSFGKKNHIICHLC 417
           K  D      I +  GKK++ +  + 
Sbjct: 467 KPDDALDGKLILIRVGKKDYHVIEVT 492


>gi|163848622|ref|YP_001636666.1| tyrosyl-tRNA synthetase [Chloroflexus aurantiacus J-10-fl]
 gi|222526556|ref|YP_002571027.1| tyrosyl-tRNA synthetase [Chloroflexus sp. Y-400-fl]
 gi|163669911|gb|ABY36277.1| tyrosyl-tRNA synthetase [Chloroflexus aurantiacus J-10-fl]
 gi|222450435|gb|ACM54701.1| tyrosyl-tRNA synthetase [Chloroflexus sp. Y-400-fl]
          Length = 390

 Score =  364 bits (935), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 100/410 (24%), Positives = 177/410 (43%), Gaps = 27/410 (6%)

Query: 9   LSILSERGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           LS L  RG + ++    EL      G  +    G+D T   +H GH   L  L   Q+ G
Sbjct: 3   LSELLRRG-VAEVIVESELRARLQSGTPLRLKQGFDPTKPDMHIGHAVGLRKLRAFQELG 61

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+ + ++G  T+ IGDPS RDE+R  + + E++ N E     F   +     +       
Sbjct: 62  HQVVLIVGDWTAQIGDPSGRDETRTRLSAAEVRANAETYMEQFFRVVDRQRTEVRWQ--- 118

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
              W         L ++   F++ +ML+ E+ R R +    L+ LE  Y +LQAYD V +
Sbjct: 119 -SEWFGQFTLEHAL-DLAGRFTLAQMLAHETFRKRYETGAPLTILELMYPMLQAYDSVAI 176

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
             +    ++ GG+DQ  NI+ G +L  +L          PL+    G KM KT +  + +
Sbjct: 177 KAD----VEFGGTDQKFNILAGRELMAQLGMTPQQVFLVPLIPGTDGRKMSKTFNNTVDI 232

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAKKIIAT 304
                 P   +    ++ D  +  + + LT +P++EID M            + K  +A 
Sbjct: 233 ---RMPPSEMYGRIMSMSDEVLPLYFEVLTDVPLAEIDEMKLAMAAGQVNPRDLKMRLAR 289

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           EI    H    A  A  A +  F      + +PT +++        G++ ++V +G A S
Sbjct: 290 EIVAQFHDPAAAAAAEAAFVRQFVEREIPEDIPTFTLTA-----PSGIVEVLVASGLAPS 344

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +EARR +    ++++   + +  L +         N+ +  G++  +  
Sbjct: 345 KSEARRLIDGGGVRVDGERVEDYALTLSP-----GANVVVQVGRRKFVRV 389


>gi|194246515|ref|YP_002004154.1| Tyrosyl-tRNA synthetase [Candidatus Phytoplasma mali]
 gi|254783623|sp|B3R0D7|SYY_PHYMT RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|193806872|emb|CAP18301.1| Tyrosyl-tRNA synthetase [Candidatus Phytoplasma mali]
          Length = 417

 Score =  364 bits (935), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 135/419 (32%), Positives = 221/419 (52%), Gaps = 19/419 (4%)

Query: 8   FLSILSERGFIHQISNPRELDILCS-QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
               L  R  I + S+ +   +L      +  Y G+D TA SL  GHL Q++    +QK 
Sbjct: 3   LFEELKWRNLITECSDEKRAKLLLDGNKKIKFYCGFDATAGSLTVGHLVQIITFLLIQKK 62

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH PI L+GG TS IGDP  + E R+++   +I +N  KI   F   + + +      ++
Sbjct: 63  GHFPIVLLGGATSFIGDPK-KIEERKLLDPSQILDNFNKISLQFKKILSFIS----FEIV 117

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W+  I  I+ LR+ G  F++N MLS E + +RLK  + LS+ EF+YM+LQ+ DF  
Sbjct: 118 NNYDWISKIDVINFLRKYGKLFNINYMLSKEVIANRLK--KGLSYAEFSYMVLQSLDFQY 175

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGER----LKTPKLFALTSPLLTTASGTKMGKTLS 242
           L ++ +  +Q GGSDQWGNI  G++L  +        K   +T+ LL  + GTK GK+  
Sbjct: 176 LFEHKNVIMQFGGSDQWGNITSGLELIRKINKIKDNDKPVGMTNALLLKSDGTKFGKSED 235

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI--DRMAKLQGKEINEAKK 300
           G +WL++++TSPY  +QY+ N +D +VV++ K LT L   EI   +   +   +   A+K
Sbjct: 236 GVLWLDQKLTSPYKIYQYFLNTEDKEVVNYLKSLTLLSKKEIINLKEENIVNPQKRLAQK 295

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI-----SISKDEVSRGMGLLTL 355
           I+A EI T++HG++  E         F          +      +++  EV+  + LL  
Sbjct: 296 ILAKEIITLIHGKKIFENCFNTNQALFVGKKDQLSEQSFYFLKYTLNYIEVNDKISLLEA 355

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +V      S N+A+  + ++AIKI + I+ + +L + ++       I L  GK+ + + 
Sbjct: 356 LVFTKLTNSKNKAKELISNHAIKIFDQIVDDTELILNIKHSLFNKYILLKKGKRFNALI 414


>gi|108563184|ref|YP_627500.1| tyrosyl-tRNA synthetase [Helicobacter pylori HPAG1]
 gi|107836957|gb|ABF84826.1| tyrosyl-tRNA synthetase [Helicobacter pylori HPAG1]
          Length = 402

 Score =  364 bits (934), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 103/426 (24%), Positives = 194/426 (45%), Gaps = 35/426 (8%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLT 55
           M    S  L  +  RG  ++I     ++ L  +            G+D TA  LH GH  
Sbjct: 1   MEQKISTALKEI-ARGA-NEIIGLEYIEKLVRKYYETNERFIVKAGFDPTAPDLHLGHTV 58

Query: 56  QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK 115
            +  L  LQ+ G +   L+G  T++IGDP+ ++E+R+ +  +++ EN +  +      + 
Sbjct: 59  LIQKLALLQQYGARVKFLIGDFTAMIGDPTGKNETRKPLNREQVLENAKTYEEQIYKILD 118

Query: 116 YGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFN 175
               +    +  N  WL ++    ++ E+ + FSV RML  +    R K  + +S +EF 
Sbjct: 119 ----EKHTEVCFNSAWLDTLGAKGMI-ELCAKFSVARMLERDDFAKRYKENRPISIVEFL 173

Query: 176 YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASG 234
           Y +LQ YD V +  +    +++GG+DQ  N++ G  L        +   +T PLL    G
Sbjct: 174 YPLLQGYDSVAMDAD----IELGGNDQKFNLLVGRFLQRAYGLNKEQSVITMPLLEGLDG 229

Query: 235 -TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK---L 290
             KM K+L   + + +E   P   +    ++ D  +  +   L+   + EI+ +      
Sbjct: 230 VQKMSKSLGNYVGITEE---PNAMFGKIMSVSDDLMWRYYTLLSAKTLEEIEDLKHGILN 286

Query: 291 QGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGM 350
           Q       K+ +A+EI    +  ++A KA     + F  ++  +      +S+ +   G+
Sbjct: 287 QTLHPKAVKEDLASEIVARYYDNDQAFKAKEQFSKVFSANLLPE-----ILSESDFDEGV 341

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
           G+L ++ + GF  ST++ARR ++   +KIN  ++ NE  +         GN  +  GKK 
Sbjct: 342 GILDVLKQIGFCPSTSQARRDIQGGGVKINQEVVKNESYRFVK------GNYVIQLGKKR 395

Query: 411 HIICHL 416
            +  ++
Sbjct: 396 FMKLNI 401


>gi|317012585|gb|ADU83193.1| tyrosyl-tRNA synthetase [Helicobacter pylori Lithuania75]
          Length = 402

 Score =  364 bits (934), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 97/390 (24%), Positives = 183/390 (46%), Gaps = 28/390 (7%)

Query: 32  SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESR 91
           +        G+D TA  LH GH   +  L  LQ+ G +   L+G  T++IGDP+ ++E+R
Sbjct: 35  TNERFIVKAGFDPTAPDLHLGHTVLIQKLALLQQYGARVKFLIGDFTAMIGDPTGKNETR 94

Query: 92  RMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVN 151
           + +  +++ EN +  +      +     +    +  N TWL ++    ++ E+ + FSV 
Sbjct: 95  KPLNREQVLENAKTYEEQIYKILD----QKHTEVCFNSTWLDTLGTKGMI-ELCAKFSVA 149

Query: 152 RMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGID 211
           RML  +    R K  + +S +EF Y +LQ YD V +  +    +++GG+DQ  N++ G  
Sbjct: 150 RMLERDDFAKRYKENRPISIVEFLYPLLQGYDSVAMDAD----IELGGNDQKFNLLVGRF 205

Query: 212 LGERLK-TPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADV 269
           L        +   +T PLL    G  KM K+L   + + +E   P   +    ++ D  +
Sbjct: 206 LQRAYGLNKEQSVITMPLLEGLDGVQKMSKSLGNYVGITEE---PNAMFGKIMSVSDDLM 262

Query: 270 VSFAKRLTTLPMSEIDRMAK---LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMEC 326
             +   L+   + EI+ +      Q       K+ +A+EI    +  ++A KA     + 
Sbjct: 263 WRYYTLLSAKTLEEIEDLKHGILNQTLHPKAVKEDLASEIVARYYDNDQAFKAKEQFSKV 322

Query: 327 FDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISN 386
           F  ++  +      +S+ +   G+G+L ++ + GF  ST++ARR ++   +KIN  +I +
Sbjct: 323 FSANLLPE-----ILSESDFDEGVGVLDVLKQIGFCPSTSQARRDIQGGGVKINQEVIKD 377

Query: 387 EKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           E  +         GN  +  GKK  +  ++
Sbjct: 378 ESYRFVK------GNYVIQLGKKRFMKLNI 401


>gi|330830717|ref|YP_004393669.1| Tyrosyl-tRNA synthetase 2 [Aeromonas veronii B565]
 gi|328805853|gb|AEB51052.1| Tyrosyl-tRNA synthetase 2 [Aeromonas veronii B565]
          Length = 399

 Score =  364 bits (934), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 96/420 (22%), Positives = 174/420 (41%), Gaps = 26/420 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M   +     I  +RG    +     +  L     +   +G D TA  +H GH   L  L
Sbjct: 1   MSQLEVALAEI--KRGAEEILVEEELVAKLKEGRPLRIKLGMDPTAPDIHLGHTVILNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GH+ I L+G  T+++GDPS ++ +R  +  + I+ N           +     +
Sbjct: 59  KTFQDLGHEVILLIGDFTAMVGDPSGKNATRPPLSEEAIKHNALTYAEQAFKILDPAKTR 118

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N TWL  +    +++ + +  +V RM+  +  + R    QS++  EF Y +LQ
Sbjct: 119 ----IEYNSTWLSELGATGMIK-LAAKQTVARMMERDDFKKRYTGGQSIAIHEFLYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGK 239
            YD V L  +    +++GG+DQ  N++ G +L +         L  PLL    G  KM K
Sbjct: 174 GYDSVALKAD----VELGGTDQKFNLLMGRELQKDAGMATQCVLMMPLLVGLDGVKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EIN 296
           +    I ++    +P   +    +I D  + ++ + L+  P++EI+              
Sbjct: 230 SAGNYIGVH---DAPGEMFGKIMSITDDLMWNYYELLSFRPLAEIEEFKAGIAAGTLNPR 286

Query: 297 EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLI 356
           + K  +A EI    H    AE A     + F  +     MP I ++ +    G+ +  L+
Sbjct: 287 DVKIWLAKEIIARYHDEAAAEAAHEDFTQRFSKNAIPDEMPEIELALE--GEGLAIANLL 344

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            +A    +T+EA R +K  A+K++   + + K           G      GK+      +
Sbjct: 345 KEADLVATTSEALRMIKQGAVKVDGEKLEDGKA------LIGAGTAVYQVGKRKFARVTV 398


>gi|15645393|ref|NP_207567.1| tyrosyl-tRNA synthetase [Helicobacter pylori 26695]
 gi|3024675|sp|P56417|SYY_HELPY RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|2313900|gb|AAD07821.1| tyrosyl-tRNA synthetase (tyrS) [Helicobacter pylori 26695]
          Length = 402

 Score =  364 bits (934), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 99/390 (25%), Positives = 184/390 (47%), Gaps = 28/390 (7%)

Query: 32  SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESR 91
           +        G+D TA  LH GH   +  L  LQ+ G +   L+G  T++IGDP+ ++E+R
Sbjct: 35  TNERFIVKAGFDPTAPDLHLGHTVLIQKLALLQQYGARVKFLIGDFTAMIGDPTGKNETR 94

Query: 92  RMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVN 151
           + +  +++ EN +  +      +     +    +  N TWL ++    ++ E+ + FSV 
Sbjct: 95  KPLNREQVLENAKTYEEQIYKILD----EKHTEVCFNSTWLDALGAKGMI-ELCAKFSVA 149

Query: 152 RMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGID 211
           RML  +    R K  + +S +EF Y +LQ YD V +  +    +++GG+DQ  N++ G  
Sbjct: 150 RMLERDDFTKRYKENRPISIVEFLYPLLQGYDSVAMDAD----IELGGNDQKFNLLVGRF 205

Query: 212 LGERLK-TPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADV 269
           L        +   +T PLL    G  KM K+L   + + +E   P   +    ++ D  +
Sbjct: 206 LQRAYGLNKEQSVITMPLLEGLDGVQKMSKSLGNYVGITEE---PNAMFGKIMSVSDDLM 262

Query: 270 VSFAKRLTTLPMSEIDRMAK---LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMEC 326
             +   L+T  + EI+ +      Q       K+ +A+EI    +  ++A KA     + 
Sbjct: 263 WRYYTLLSTKTLEEIEDLKHGILNQTLHPKAVKEDLASEIVARYYDNDQAIKAKEQFSKV 322

Query: 327 FDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISN 386
           F  ++  +      +S+ +   G+G+L ++ + GF  ST++ARR ++   +KIN  +I N
Sbjct: 323 FSANLLPE-----ILSESDFDEGVGILDVLKQIGFCPSTSQARRDIQGGGVKINQEVIKN 377

Query: 387 EKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           E  +         GN  +  GKK  +  ++
Sbjct: 378 ESYRFVK------GNYVIQLGKKRFMKLNI 401


>gi|16329759|ref|NP_440487.1| tyrosyl-tRNA synthetase [Synechocystis sp. PCC 6803]
 gi|2501076|sp|P73141|SYY_SYNY3 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|1652244|dbj|BAA17167.1| tyrosyl tRNA synthetase [Synechocystis sp. PCC 6803]
          Length = 404

 Score =  363 bits (933), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 90/386 (23%), Positives = 167/386 (43%), Gaps = 23/386 (5%)

Query: 32  SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESR 91
               +   +G D T + +H GH      L   Q  GH  + ++G  T+ IGDP+ + E R
Sbjct: 37  QDRPLRVKLGIDPTGTDIHLGHSIPFRKLRAFQDAGHTAVVIIGDFTAQIGDPTGKSEVR 96

Query: 92  RMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVN 151
           + + + +++ N E         + + T      +  N  WL ++    +L E+ +  +V 
Sbjct: 97  KQLTADQVKRNAESYLAQLKPILDFDTP-GRLEIRYNSEWLSNLDLNKIL-ELLATMTVG 154

Query: 152 RMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGID 211
           +ML+ E    R ++E  +   EF Y ++Q YD V +  +    +++GG+DQ  NI  G D
Sbjct: 155 QMLAKEGFAERFQKENPIFLHEFLYPLMQGYDSVAVNAD----VELGGTDQKFNIAVGRD 210

Query: 212 LGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVV 270
           L         F L  P+L    G  KM K+L+  + L ++     + +       D  + 
Sbjct: 211 LQRHFGKTPQFGLLLPILLGTDGQQKMSKSLNNYVGLQEDAL---SMYSKLEKTPDRLLG 267

Query: 271 SFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMS 330
            + + LT L ++E+            E +K++A E+T   HG   A  A   A +     
Sbjct: 268 EYFELLTNLDLAELPE-------NPRECQKLLAKEVTAQFHGVAGAIAAQKTAEDIVTQG 320

Query: 331 --IHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEK 388
              ++  +P  S++  E++  + L  L+  +G   S++E RR +K  A++++   + +  
Sbjct: 321 KAGNTDSVPEFSLA--EITFPVKLAYLLSASGLCPSSSEGRRQIKGGAVRLDGDRLEDVN 378

Query: 389 LQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +             L  GKK  I  
Sbjct: 379 QEYADPKMLINK--VLQMGKKKFIRL 402


>gi|225619193|ref|YP_002720419.1| tyrosyl-tRNA synthetase [Brachyspira hyodysenteriae WA1]
 gi|225214012|gb|ACN82746.1| tyrosyl-tRNA synthetase [Brachyspira hyodysenteriae WA1]
          Length = 398

 Score =  363 bits (933), Expect = 3e-98,   Method: Composition-based stats.
 Identities = 104/411 (25%), Positives = 179/411 (43%), Gaps = 29/411 (7%)

Query: 11  ILSERGFIHQISNPRELDILCSQGV-VTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
            L  RG I ++    E+      G  +T   G+D TA  +H GH   L  +   Q  GHK
Sbjct: 13  ELITRG-ISEVIGLDEIKEKLKSGKQLTVKAGFDPTAPDIHLGHTVLLRKMRHFQLLGHK 71

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
            I L+G  T  IGDPS + ++R  +  +++ +N E  K      +         ++  N 
Sbjct: 72  VIFLIGDFTGRIGDPSGKTKTRPRLTLEDVLKNAETYKQQVFKILD----PEKTIVEFNS 127

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
            WL  + + D+L  + S ++V +M+  +    R K  Q +S +EF Y + Q YD V L  
Sbjct: 128 KWLEKMSFADVLG-LTSRYTVAQMIERDDFSKRYKNGQPISIMEFLYPLAQGYDSVAL-- 184

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLN 248
             +C +++GG+DQ  N++ G  L +         +T PLL    G  KM K+L   I + 
Sbjct: 185 --ECDVELGGNDQKFNLLVGRTLMKEYGLSPQAVITVPLLEGLDGVEKMSKSLGNYIGI- 241

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKKIIATEI 306
               S  + +    +I D+ +  + + LT +P+ +I     A   G+     K I+A EI
Sbjct: 242 --YDSAKDMYGKAMSIPDSLISKYMELLTDIPIDDIKNYVKAMENGENPRNIKGILAKEI 299

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
             + HG EEA  A       F        +  ++I+KDE      +L ++     + S +
Sbjct: 300 VKIYHGEEEALNAEEEFKRIFSSKGLPDEIEEVTINKDE-----NILNVLATCMSSESKS 354

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
             +R +   ++ ++N  I++    +  +         L  GK+N       
Sbjct: 355 NLKRLVSQGSVTLDNEKINDINALVSKEG-------ILKVGKRNFFKIKFS 398


>gi|292670923|ref|ZP_06604349.1| tyrosine-tRNA ligase [Selenomonas noxia ATCC 43541]
 gi|292647544|gb|EFF65516.1| tyrosine-tRNA ligase [Selenomonas noxia ATCC 43541]
          Length = 320

 Score =  363 bits (933), Expect = 3e-98,   Method: Composition-based stats.
 Identities = 142/319 (44%), Positives = 196/319 (61%), Gaps = 11/319 (3%)

Query: 94  MRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRM 153
           M    I  N E  K   S FI +   +  A+M++N  WL  + YIDLLR++G  F+VNRM
Sbjct: 1   MTDDTIHYNCECFKKQISRFIDFNDDR--AIMVDNGDWLRKLNYIDLLRDVGKHFTVNRM 58

Query: 154 LSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLG 213
           LS ES + R   E+ L+FLEFNYMI+QAYDF+EL + Y CRLQMGG DQW NII G++L 
Sbjct: 59  LSAESYKQR--WEKGLTFLEFNYMIMQAYDFLELNRRYGCRLQMGGDDQWSNIIAGVELC 116

Query: 214 ERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFA 273
            R K   +F LT+ LLT + G+KMGKT  GA+WL+ E TS Y+F+QYWRNIDDAD+    
Sbjct: 117 RRKKNITVFGLTNRLLTKSDGSKMGKTAGGALWLDPEKTSSYDFYQYWRNIDDADIEICL 176

Query: 274 KRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS 333
             LT LPM E+ R+A  +G+ IN +K+I+A E+T +VHG +EA KA   A   F   I +
Sbjct: 177 SLLTYLPMEEVRRLAAAEGRNINRSKEILAYEVTKIVHGEQEALKAQETARTLFSGGISA 236

Query: 334 QHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL 393
           Q      + K  V+ G  L+ ++ ++   +S  EARR ++   I +N+  +++E   +  
Sbjct: 237 Q------LPKIHVTIGEKLIDVLTRSKVLSSKGEARRLIQQGGITLNDVRVTDEYYVLNE 290

Query: 394 QDFDSTGNIKLSFGKKNHI 412
            DF   G   +  GKK H 
Sbjct: 291 IDFLQ-GIALIKKGKKKHY 308


>gi|294625179|ref|ZP_06703821.1| tyrosyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
 gi|292600498|gb|EFF44593.1| tyrosyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
          Length = 404

 Score =  363 bits (932), Expect = 3e-98,   Method: Composition-based stats.
 Identities = 100/411 (24%), Positives = 169/411 (41%), Gaps = 24/411 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG    +   +    L S   +    G+D TA  LH GH   L  +   Q+ GH+ I
Sbjct: 10  LIGRGAEEILKLDQLQARLASGKPLRVKAGFDPTAPDLHLGHTVLLNKMRQFQQLGHQVI 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T +IGDPS ++ +R+ +  +++  N    +      +     +    +  N  W
Sbjct: 70  FLIGDFTGMIGDPSGKNATRKPLSREDVLVNARTYEEQVFKILDRERTE----VRFNSEW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
              +   D+++ + +  +V RML  +    R   +Q ++  EF Y ++Q YD V L  + 
Sbjct: 126 FGQMSAADMIK-LSAQHTVARMLERDDFAKRFGSQQPIAIHEFLYPLVQGYDSVALKAD- 183

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G  L E         LT PLL    G  KM K+L   I +N+ 
Sbjct: 184 ---VELGGTDQKFNLLMGRGLQEHYGQAPQIVLTMPLLEGLDGVAKMSKSLGNYIGINEP 240

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTT-LPMSEIDRMAKLQGK---EINEAKKIIATEI 306
                +       I DA    +   L+  + ++E  R+ +          E K  +A E+
Sbjct: 241 A---IDIVTKTMKIGDALTWRWIDLLSFDISLAEAARLKEQVASGELHPREVKLRLAREL 297

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
            T  H    AE+A             +  +P   +     + G+ L  L+  AG   S +
Sbjct: 298 ATRFHDAATAEQAIAGWHAVVTGQGDTSLLPLQEVVVP--AEGLRLAGLLTAAGLTPSNS 355

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           EA R LK  A+KI+  ++ +         F       +  GK+N     L 
Sbjct: 356 EATRKLKERAVKIDGEVVEDLSRV-----FTQGFEGVIQVGKRNFARVSLV 401


>gi|207092023|ref|ZP_03239810.1| tyrosyl-tRNA synthetase [Helicobacter pylori HPKX_438_AG0C1]
          Length = 402

 Score =  363 bits (932), Expect = 3e-98,   Method: Composition-based stats.
 Identities = 105/417 (25%), Positives = 192/417 (46%), Gaps = 36/417 (8%)

Query: 12  LSE--RGFIHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           L E  RG  ++I     ++ L  +            G+D TA  LH GH   +  L  LQ
Sbjct: 9   LKEIARGA-NEIIGLEYIEKLVRKYYETNERFIVKAGFDPTAPDLHLGHTVLIQKLALLQ 67

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + G +   L+G  T++IGDP+ ++E+R+ +  +++ EN +  +      +     +    
Sbjct: 68  QYGARVKFLIGDFTAMIGDPTGKNETRKPLNREQVLENAKTYEEQIYKILD----EKHTE 123

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           +  N TWL ++    ++ E+ + FSV RML  +    R K  + +S +EF Y +LQ YD 
Sbjct: 124 VCFNSTWLDALGAKGMI-ELCAKFSVARMLERDDFTKRYKENRPISIVEFLYPLLQGYDS 182

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASG-TKMGKTLS 242
           V +  +    +++GG+DQ  N++ G  L        +   +T PLL    G  KM K+L 
Sbjct: 183 VAIDAD----IELGGNDQKFNLLVGRFLQRAYGLNKEQSVITMPLLEGLDGVQKMSKSLG 238

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK---LQGKEINEAK 299
             + + +E   P   +    ++ D  +  +   L+   + EI+ +      Q       K
Sbjct: 239 NYVGITEE---PNAMFGKIMSVSDDLMWRYYTLLSAKTLEEIEDLKHGILNQTLHPKAVK 295

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKA 359
           + +A EI    +  E+A KA     + F  ++  +      +S+ +   G+G+L ++ + 
Sbjct: 296 EDLAGEIVARYYDNEQAIKAKEQFSKVFSANLLPE-----ILSESDFDEGVGILDVLKQI 350

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           GF  ST++ARR ++   +KIN  +I NE  +         GN  +  GKK  +  ++
Sbjct: 351 GFCPSTSQARRDIQGGGVKINQEVIKNESYRFVK------GNYVIQLGKKRFMKLNI 401


>gi|149194046|ref|ZP_01871144.1| tyrosyl-tRNA synthetase [Caminibacter mediatlanticus TB-2]
 gi|149135999|gb|EDM24477.1| tyrosyl-tRNA synthetase [Caminibacter mediatlanticus TB-2]
          Length = 410

 Score =  363 bits (932), Expect = 3e-98,   Method: Composition-based stats.
 Identities = 97/407 (23%), Positives = 177/407 (43%), Gaps = 32/407 (7%)

Query: 19  HQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           ++I    +++ L ++        T   G+D TA  LH GH   L  L   QK G K   L
Sbjct: 26  NEIIGLEKIEELVNKFLHTGERFTIKAGFDPTAPDLHLGHTVLLQKLKTFQKYGAKVQFL 85

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
           +G  T+ IGDP+ +  +R+M+  +E+++N +  +      +          ++ N TWL 
Sbjct: 86  IGDFTAQIGDPTGKSATRKMLTPEEVKQNAKTYEAQVFKILDKDLTD----VVFNSTWLN 141

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDC 193
            +     + E+ + ++V RML  +    R K +  ++  EF Y +LQ YD V L  +   
Sbjct: 142 KLGATG-IVELTTTYTVARMLERDDFEKRFKSQTPIAISEFIYPLLQGYDSVALKSD--- 197

Query: 194 RLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEM 251
            +++GG+DQ  N++ G  L +      +   +  PLL    G  KM K+L   I + ++ 
Sbjct: 198 -IEIGGTDQKFNLLMGRHLQKVYNIGKEQSVIMMPLLVGLDGVNKMSKSLGNYIGITEDA 256

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIATEITTM 309
            +    +    +I D  +  + + L+   + EI  + +    G      K+++A EI   
Sbjct: 257 NT---IFAKVMSISDELMWDWYELLSDKSIEEIKELKEQVKNGLNPKVVKEMLAIEIVDR 313

Query: 310 VHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEAR 369
            HG+   EKA     +    +     +    I          ++  +V    A S +EAR
Sbjct: 314 FHGKGTGEKAKEHFDKVHKQNQIPDDIEEFEI------EPQNIVDALVTTKLANSKSEAR 367

Query: 370 RHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           RH+K  A++IN   IS++ +     + +      L  GK+      +
Sbjct: 368 RHIKGGAVRINQEKISSQDI-----NLEKDKEYILQIGKRKFAKVRV 409


>gi|97202387|sp|Q8D2L6|SYY_WIGBR RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
          Length = 426

 Score =  363 bits (932), Expect = 3e-98,   Method: Composition-based stats.
 Identities = 138/420 (32%), Positives = 224/420 (53%), Gaps = 11/420 (2%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
            D +  L  R  I ++++   +  +  +  +  Y G+D TA SLH GHL  L+ L     
Sbjct: 2   KDLIQELKNRKLISKLTDEINIKKILKEKKINLYCGFDPTADSLHIGHLIPLLFLKRFSN 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH PI ++GG T+++GD + +     + + + ++   + I+    + IKY     + ++
Sbjct: 62  FGHIPIIVIGGATALLGDFNIKKNKSFLEKYKNVKNWSKTIENQILNIIKYENNNCNLII 121

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           LNN  W+  +K I+ LR+IG F S+N++L  E V+ +LK  Q +SF+EF+Y +LQ YD+ 
Sbjct: 122 LNNYLWIKELKIINFLRDIGRFISINKILRKEIVKKKLKENQHISFMEFSYSLLQGYDYY 181

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT--LSG 243
            L  NYD  +Q+GGSDQW NII GIDL  ++   K++ +T+PLLT ++G+K+GK+     
Sbjct: 182 FLNLNYDVYIQIGGSDQWSNIISGIDLVNKINKKKVYGITTPLLTRSNGSKLGKSDDKEK 241

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR-MAKLQGKEIN--EAKK 300
            IWL+K+ TS Y F+Q+W N  D  +  + K  T + MSEI++   K   KEIN  +A+K
Sbjct: 242 VIWLDKKKTSVYEFYQFWLNTPDEKIFRYLKLFTFISMSEINKLKCKFFNKEINPFQAQK 301

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI------SISKDEVSRGMGLLT 354
           I+A EIT +VHG  +   A  A    F   I    +          I          +  
Sbjct: 302 ILADEITKIVHGISQLRLAQKATNFLFYKKISELSIEDFYLLSTSGIKIYYPKSNENIKD 361

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           ++V +  + S N A+  + S++I+INN    +     K +D        +  GKK+  + 
Sbjct: 362 ILVNSKLSKSKNNAKSVILSSSIRINNKKQKSIDFMFKKEDKLFNLFTLIKKGKKDFCLL 421


>gi|312134760|ref|YP_004002098.1| tyrosyl-tRNA synthetase [Caldicellulosiruptor owensensis OL]
 gi|311774811|gb|ADQ04298.1| tyrosyl-tRNA synthetase [Caldicellulosiruptor owensensis OL]
          Length = 396

 Score =  363 bits (932), Expect = 3e-98,   Method: Composition-based stats.
 Identities = 103/406 (25%), Positives = 186/406 (45%), Gaps = 28/406 (6%)

Query: 16  GFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMG 75
           G    I+    ++ L     +   +G D     +H GH   L  L  LQ  GH  I ++G
Sbjct: 13  GAAEIITEEELVEKLKQDRPLNIKLGLDPNVPDVHLGHAVVLRKLKQLQDLGHNIILIIG 72

Query: 76  GGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSI 135
             T++IGDP+ + E+R+ +  +E+Q+N E  K      +          +  N  WL  +
Sbjct: 73  DFTAMIGDPTGKSETRKQLTKEEVQKNAEPFKQQVLKILD----PKKTTVRYNSEWLEPM 128

Query: 136 KYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRL 195
            ++D++  + S ++V RML  E+ + R+++   LS  EF Y ++Q YD V +    +  +
Sbjct: 129 NFLDVI-NLASKYTVARMLERETFKQRMEKNLPLSIHEFFYPLMQGYDSVVI----EADV 183

Query: 196 QMGGSDQWGNIICGIDLGERLKTPK-LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTS 253
           ++G ++Q  NI+ G  L +         AL  P+L    G  KM K+L   I +N+    
Sbjct: 184 ELGATEQKFNILMGRTLQKEYGCKTIQVALLMPILVGTDGVNKMSKSLGNYIGINE---P 240

Query: 254 PYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAKKIIATEITTMV 310
           P   +    +I D  ++S+ +  T L   EI+ M +   +      +AK  +A EI  + 
Sbjct: 241 PNIMYGKVMSIPDEIMISYYELTTDLEPEEIEEMKRKLEEGTLHPRDAKMRLAREIVKLY 300

Query: 311 HGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARR 370
           HG E A +A    ++ F       ++P + +   +V     L   +V+    +ST+E  R
Sbjct: 301 HGEEAAIRAEEEFIKVFQKKDIPDNIPEVELQSSKV----YLPRFMVENKLCSSTSEGMR 356

Query: 371 HLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            +KS A+K+N   +++  ++++  D        L  GK   +   L
Sbjct: 357 LIKSGAVKLNGEKVNDLDIELQNGD-------VLQVGKLKFVKVKL 395


>gi|108804150|ref|YP_644087.1| tyrosyl-tRNA synthetase [Rubrobacter xylanophilus DSM 9941]
 gi|108765393|gb|ABG04275.1| tyrosyl-tRNA synthetase [Rubrobacter xylanophilus DSM 9941]
          Length = 388

 Score =  363 bits (932), Expect = 4e-98,   Method: Composition-based stats.
 Identities = 97/397 (24%), Positives = 175/397 (44%), Gaps = 30/397 (7%)

Query: 20  QISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGT 78
            +    ELD     G  +   +G D TA  +H GH   L  L   Q  GH  + ++G  T
Sbjct: 16  DVVPREELDRRLRSGERLRVKLGMDPTAPDIHLGHAVVLGKLRRFQDLGHTAVLVIGDYT 75

Query: 79  SIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYI 138
           + +GDPS R ++R ++  ++I+EN           +     +    + +N  WL  +   
Sbjct: 76  ARVGDPSGRSKTRPVLSPEQIRENTRTYLEQAYRVLDEARTE----VRHNSEWLAPLALA 131

Query: 139 DLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMG 198
           D++R +    +V R+L  +    R      ++  E  Y ++QAYD V +  +    +++G
Sbjct: 132 DIIR-LTRAATVARILERDDFAKRYAAGDPITLTELLYPLMQAYDSVAIDAD----VELG 186

Query: 199 GSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNF 257
           G+DQ  N++ G  + E         LT+PLL    G  KM K+L   I +++    P   
Sbjct: 187 GTDQLYNLLMGRHVMEYYGKRPQCILTTPLLVGTDGRMKMSKSLGNYIGVSEP---PQEM 243

Query: 258 WQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAE 317
           +    +I D  +  +   +   PM E          E  E K+ +A  I  M HG E A 
Sbjct: 244 FGKAMSIPDEAMPDYYTLVLGRPMPE---------AEPVEQKRELARGIVRMFHGEEAAR 294

Query: 318 KAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAI 377
           +A           +    +P +++     +  + ++ LI +AGFA + NEARR ++  A+
Sbjct: 295 EAERHFDTVVRRGV-PDDVPDVALPD---AGEVWIVDLITRAGFAATNNEARRFVRGRAV 350

Query: 378 KINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +IN  ++ +E++ +  ++        L  GK+ +   
Sbjct: 351 RINGEVVEDERVSLPTEELSGA---VLQVGKRRYARL 384


>gi|222823624|ref|YP_002575198.1| tyrosyl-tRNA synthetase [Campylobacter lari RM2100]
 gi|222538846|gb|ACM63947.1| tyrosyl-tRNA synthetase [Campylobacter lari RM2100]
          Length = 400

 Score =  362 bits (931), Expect = 4e-98,   Method: Composition-based stats.
 Identities = 109/422 (25%), Positives = 182/422 (43%), Gaps = 36/422 (8%)

Query: 7   DFLSILSE--RGFIHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLML 59
           D   I+ E  RG I +I +   L  L               G+D TA+ LH GH   L  
Sbjct: 2   DINEIIKEIKRG-IAEIIDEERLVSLVKNYYEKGENFFVKAGFDPTAADLHLGHTVVLSK 60

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG 119
           +  LQK G     L+G  T+ IGDP+ +  +R+ +  +E+ +N +  +      +     
Sbjct: 61  MALLQKHGAIVQFLIGDFTAQIGDPTGKSVTRKKLDKEEVLKNAKTYEEQVFKILD---- 116

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
            +   +  N  WL  +     + E+ S FSV RML  +    R K +  +S  EF Y +L
Sbjct: 117 PSKTQIHFNSKWLNELGAAG-IVELTSTFSVARMLERDDFTKRFKEQSPISICEFLYPLL 175

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASGT-KM 237
           Q YD V L  +    ++MGG+DQ  N++ G  L        +   +  PLL    G  KM
Sbjct: 176 QGYDSVVLKSD----IEMGGTDQKFNLLMGRQLQRVYNCQKEQAVMMMPLLEGLDGVNKM 231

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKE 294
            K+L   I + ++     + +    +I D  +  + + L+   ++EI ++    K     
Sbjct: 232 SKSLGNYIGVTEDAK---DMYAKVLSISDELMFRYYELLSEKSLNEISQIKDDIKNGSLH 288

Query: 295 INEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLT 354
             +AK+ +A EIT   H  E A KA     +          MP+ ++        + L  
Sbjct: 289 PKKAKENLALEITARFHSNECALKAKEEFDKVHSAKELPSDMPSFTL-----EGSIWLAK 343

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            IV+    +ST+ ARR + SNA+ +N   + +E+ Q++      +G   L  GK+     
Sbjct: 344 AIVECKMESSTSAARRLINSNAVSVNGEKVQDEQFQLE------SGEYILQVGKRKFAKL 397

Query: 415 HL 416
            +
Sbjct: 398 KV 399


>gi|296125527|ref|YP_003632779.1| tyrosyl-tRNA synthetase [Brachyspira murdochii DSM 12563]
 gi|296017343|gb|ADG70580.1| tyrosyl-tRNA synthetase [Brachyspira murdochii DSM 12563]
          Length = 396

 Score =  362 bits (931), Expect = 4e-98,   Method: Composition-based stats.
 Identities = 104/411 (25%), Positives = 178/411 (43%), Gaps = 29/411 (7%)

Query: 11  ILSERGFIHQISNPRELDILCSQGV-VTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
            L  RG I ++    E+      G  +T   G+D TA  +H GH   L  +   Q  GHK
Sbjct: 11  ELITRG-ISEVIGLEEIKEKLKSGKQLTVKAGFDPTAPDIHLGHTVLLRKMRHFQLLGHK 69

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
            + L+G  T  IGDPS + ++R  +  +++ +N E  K      +         ++  N 
Sbjct: 70  VVFLIGDFTGRIGDPSGKTKTRPRLTLEDVLKNAETYKQQVFKILD----PEKTIVEFNS 125

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
            WL  + + D+L  + S ++V +M+  +    R K  Q +S +EF Y + Q YD V L  
Sbjct: 126 KWLEKMSFADVLG-LTSRYTVAQMIERDDFSKRYKNGQPISIMEFLYPLAQGYDSVAL-- 182

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLN 248
             +C +++GG+DQ  N++ G  L +         +T PLL    G  KM K+L   I + 
Sbjct: 183 --ECDVELGGNDQKFNLLVGRTLMKEYGLSPQAVITVPLLEGLDGVEKMSKSLGNYIGI- 239

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATEI 306
               S  + +    +I D  +  + + LT +P+ +I    K    G+     K I+A EI
Sbjct: 240 --YDSAKDMYGKAMSIPDNLISKYMELLTDIPIEDIKNYTKSMENGENPRNIKGILAKEI 297

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
             + HG EEA  A       F        +  +SI+KD+      +L ++     + S +
Sbjct: 298 VKIYHGEEEANNAEEEFKRIFSSKGLPDEIDEVSINKDD-----NILNILSVCMPSESKS 352

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
             +R +   ++ ++N  I++    I  +         L  GK+N       
Sbjct: 353 NLKRLVSQGSVSLDNEKINDINTLISKEG-------ILKVGKRNFFKIKFS 396


>gi|297181938|gb|ADI18115.1| tyrosyl-tRNA synthetase [uncultured Acidobacteriales bacterium
           HF0200_23L05]
          Length = 414

 Score =  362 bits (931), Expect = 4e-98,   Method: Composition-based stats.
 Identities = 101/399 (25%), Positives = 173/399 (43%), Gaps = 27/399 (6%)

Query: 20  QISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLM 74
            +    +L     Q       +T  +G+D TA  LH GH   +  +   Q+ GH+ I L+
Sbjct: 25  DVVRETDLRKRLEQSAESGQPLTVKVGFDPTAPDLHLGHTVLIRKMKHFQELGHRVIFLI 84

Query: 75  GGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCS 134
           G  T +IGDP+ R ++R  + S EI+EN E  K      +         ++  N +WL  
Sbjct: 85  GDFTGLIGDPTGRSKTRPALSSAEIEENAETYKRQVFKLLDPDKT----VVDFNSSWLSG 140

Query: 135 IKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCR 194
           +     +R + + ++V +ML     R R +  Q ++  EF Y + QAYD V L  +    
Sbjct: 141 LGSDGWVR-LAARYNVAQMLERRDFRKRYETGQPIAIHEFLYPLAQAYDSVYLHAD---- 195

Query: 195 LQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTS 253
           +++GG+DQ  N+  G D+    +      LT+PLL    GT KM KT    + +N+    
Sbjct: 196 VELGGTDQLFNLNVGRDIMPSYEVRPQIVLTTPLLVGLDGTEKMSKTAGNYVGINEP--- 252

Query: 254 PYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAKKIIATEITTMV 310
           P   +    ++ D  +  + + LT L +++I+ + +          +AK  +A  +    
Sbjct: 253 PGEMFGKLMSVSDDLMWDYYELLTDLSVADINTLKQGVASGVTHPKQAKVDLAKHVVGDF 312

Query: 311 HGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARR 370
           H  +EA++AA      F      + +            G  L  L+V AG A S + A R
Sbjct: 313 HSVQEAQEAAGEFERRFSRKEVPEVVEE--WMGRVPEEGQRLTALMVAAGMAKSGSAATR 370

Query: 371 HLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
            L    +KI+   + +    I        G+  L  G++
Sbjct: 371 VLSQGGVKIDGVRVEDRFHTIAATQ----GSFVLQVGRR 405


>gi|22297594|ref|NP_680841.1| tyrosyl-tRNA synthetase [Thermosynechococcus elongatus BP-1]
 gi|81744029|sp|Q8DMR1|SYY_THEEB RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|22293771|dbj|BAC07603.1| tyrosyl tRNA synthetase [Thermosynechococcus elongatus BP-1]
          Length = 408

 Score =  362 bits (931), Expect = 4e-98,   Method: Composition-based stats.
 Identities = 98/413 (23%), Positives = 173/413 (41%), Gaps = 33/413 (7%)

Query: 14  ERGFIH-------QISNPRELDILC--SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           +RG +         +     L      +Q  +    G D T S +H GH   L  L   Q
Sbjct: 13  QRGVVETFPHVPDSVKPEENLWAYLRQTQRPLRIKFGIDPTGSEIHLGHSIVLRKLRQFQ 72

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GH  + ++G  T+ IGDP+ + E R+ +  +E+  N++         + + T      
Sbjct: 73  DAGHCAVLIIGDFTAQIGDPTGKSEVRKQLTPEEVAANVQTYLEQVRPILDFETP-GRLE 131

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           +  N  WL  +    +L  +G   +V +ML+ E    R  +E  +   EF Y ++Q YD 
Sbjct: 132 IRYNSEWLAKLDLRKVLELLG-TMTVGQMLAKEGFAERYAKETPIFLHEFLYPLMQGYDS 190

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK-LFALTSPLLTTASG-TKMGKTLS 242
           V +A +    +++GG+DQ  NI  G DL    + P   F L  P+L    G  KM K+L 
Sbjct: 191 VAVAAD----VELGGTDQKFNIAVGRDLQRHFRLPTVQFGLLMPILVGTDGVQKMSKSLG 246

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKII 302
             + L +      + +     I DA V  + + LT LP+  +            + +K +
Sbjct: 247 NYVALTESAA---SMYSKLEKIPDALVNQYIELLTDLPLDSL-------PTHPRDRQKAL 296

Query: 303 ATEITTMVHGREEA--EKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
           A  + +  HG+E A   +A  AA+     +  +  +P  S+   E    + L  ++    
Sbjct: 297 ALAVVSQYHGQELALQTQAELAAIVTQGQTAQAGSIPEYSL--GEFQFPVKLTYVLSHTK 354

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
              S++EARR ++   +++N   I++    +   +        L  GKK  + 
Sbjct: 355 LCPSSSEARRQIQGGGVRLNGEKITDVDFTLTAPEPYVNQ--VLQVGKKKFLR 405


>gi|206895710|ref|YP_002247508.1| tyrosyl-tRNA synthetase [Coprothermobacter proteolyticus DSM 5265]
 gi|206738327|gb|ACI17405.1| tyrosyl-tRNA synthetase [Coprothermobacter proteolyticus DSM 5265]
          Length = 398

 Score =  362 bits (931), Expect = 5e-98,   Method: Composition-based stats.
 Identities = 96/411 (23%), Positives = 179/411 (43%), Gaps = 27/411 (6%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFW 62
            K + + +++E           +L+   ++G  +   +G D +A  LH GHL  L  L  
Sbjct: 10  LKKNVVDLITEEDL------KSKLEKTKAEGRPLRVKLGADPSAPDLHLGHLVVLRKLRQ 63

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD 122
            Q+ GH+ + ++G  T+ IGDP+ R+++R  +  +E+++N E  +      +        
Sbjct: 64  FQEFGHRIVFIIGDFTACIGDPTGRNKTRPPLTEEEVRKNAETYQEQVFKVLD----PEL 119

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
             +  N  W   +   D++  + S ++V ++L  +    R K    +   E  Y + QAY
Sbjct: 120 VDIKFNSEWNAPLSARDVILNLASRYTVAKLLERDDFNMRYKSGIPIYVHELLYPLFQAY 179

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTL 241
           D V +  +    +++GG+DQ  N++ G DL +         +T PLL    G  KM K+L
Sbjct: 180 DSVAIRAD----VELGGTDQVFNLLVGRDLQQSHGQEPQVVMTLPLLVGLDGEKKMSKSL 235

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKI 301
              +  N     P + +    +I D  + S+   LT    +EI R   +      +AK  
Sbjct: 236 GNYVAFN---DPPKDMFGKLMSIPDDLMPSYFNLLTDYSENEIKR---ILSGHPRDAKLK 289

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGF 361
           +A  IT+  +G EEA       +  F      ++M    I          +  L+V  G 
Sbjct: 290 LAWTITSFFYGEEEASYEQEEFLRVFSRRELPEYMDAYEIETLYNEGVRTITDLLVFIGA 349

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           A+S +EA+R +    +++N++ + +    ++L     T    L  GK+   
Sbjct: 350 ASSRSEAKRLVAGGGVQLNDTRVDDPMAPLQL-----TPGSVLRVGKRKFF 395


>gi|189500737|ref|YP_001960207.1| tyrosyl-tRNA synthetase [Chlorobium phaeobacteroides BS1]
 gi|189496178|gb|ACE04726.1| tyrosyl-tRNA synthetase [Chlorobium phaeobacteroides BS1]
          Length = 405

 Score =  362 bits (931), Expect = 5e-98,   Method: Composition-based stats.
 Identities = 108/421 (25%), Positives = 180/421 (42%), Gaps = 29/421 (6%)

Query: 2   PAFKSDFLSILSERGFIHQISNPRELDILCSQG-----VVTAYIGYDLTASSLHAGHLTQ 56
           P  K     I+  R  +  IS   EL+   ++       +   +G D +   LH GH   
Sbjct: 4   PPVKEQLDRII--RNTVEVIS-EEELEQKLTRSFETRTPLKIKLGADPSRPDLHLGHSVV 60

Query: 57  LMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY 116
           L  L   Q  GH+ I ++G  T++IGDPS +  +R  + ++E +EN        S  +  
Sbjct: 61  LQKLRDFQDLGHEAILIIGDFTAMIGDPSGKSTTRPQLTAEEAKENGRTYFDQASKILD- 119

Query: 117 GTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNY 176
              +    +  N  WL  + + D++R + S ++V RML  +    R +  + +S  EF Y
Sbjct: 120 ---RKKTTIRYNADWLGQMTFNDVIR-LSSHYTVARMLERDDFEKRYRSREPISIHEFLY 175

Query: 177 MILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT- 235
            + Q  D V L  +    +++GG+DQ  N++ G DL           +T PLL    G  
Sbjct: 176 PLAQGMDSVHLRND----IELGGTDQKFNLLVGRDLQREYGIHPQVCITMPLLVGTFGQD 231

Query: 236 KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI 295
           KM K+L  AI  N    +P + +    +I D  + ++   L   P    +   ++  +  
Sbjct: 232 KMSKSLGNAICFN---DTPEDIYGRVLSIPDDLIETYFTLLLPTPERSPESFREMVNESP 288

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTL 355
            EAK+ +A EI  + H  + A KA       F        +   + S       + L+ L
Sbjct: 289 REAKRTLAKEIVALFHSGDLAVKAEDHFDRVFVHKKAPLEIKEFAFSAS----SIPLVDL 344

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +V      S  EARR +  NAI+IN++ IS+   ++ L     T    +  GK+      
Sbjct: 345 LVALKAVNSKTEARRLISQNAIQINDTKISDINFEVTLDQESKT----IKAGKRKFFNVV 400

Query: 416 L 416
           L
Sbjct: 401 L 401


>gi|317014184|gb|ADU81620.1| tyrosyl-tRNA synthetase [Helicobacter pylori Gambia94/24]
          Length = 402

 Score =  362 bits (931), Expect = 5e-98,   Method: Composition-based stats.
 Identities = 104/426 (24%), Positives = 195/426 (45%), Gaps = 35/426 (8%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLT 55
           M    S  L  +  RG  ++I     ++ L  +            G+D TA  LH GH  
Sbjct: 1   MEQKISVALKEIK-RGA-NEIIGLEYIEKLVRKYYETNERFVVKAGFDPTAPDLHLGHTV 58

Query: 56  QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK 115
            +  L  LQ+ G +   L+G  T++IGDP+ ++E+R+ +  +++ EN +  +      + 
Sbjct: 59  LIQKLALLQQYGARVKFLIGDFTAMIGDPTGKNETRKPLNREQVLENAKTYEEQIYKILD 118

Query: 116 YGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFN 175
               +    +  N TWL ++    ++ E+ + FSV RML  +    R K  + +S +EF 
Sbjct: 119 ----QKHTEVCFNSTWLDALGAKGMI-ELCTKFSVARMLERDDFAKRYKENRPISIVEFL 173

Query: 176 YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASG 234
           Y +LQ YD V +       +++GG+DQ  N++ G  L        +   +T PLL    G
Sbjct: 174 YPLLQGYDSVAM----GADIELGGNDQKFNLLVGRFLQRAYGLNKEQSIITMPLLEGLDG 229

Query: 235 -TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK---L 290
             KM K+L   + + +E   P   +    ++ D  +  +   L+   + EI+ +      
Sbjct: 230 VQKMSKSLGNYVGITEE---PNAMFGKIMSVSDDLMWRYYTLLSAKTLEEIEDLKHGILH 286

Query: 291 QGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGM 350
           Q       K+ +A+EI    +  ++A KA     + F  ++    +P I + + +   G+
Sbjct: 287 QTLHPKAVKEDLASEIVARYYDNDQAFKAKEQFSKVFSANL----LPEILL-ESDFDEGV 341

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
           G+L ++ + GF  ST++ARR ++   +KIN  ++ +E  +         GN  +  GKK 
Sbjct: 342 GILDVLKQIGFCPSTSQARRDIQGGGVKINQEVVKDESYRFVK------GNYVIQLGKKR 395

Query: 411 HIICHL 416
            +  ++
Sbjct: 396 FMKLNI 401


>gi|189346070|ref|YP_001942599.1| tyrosyl-tRNA synthetase [Chlorobium limicola DSM 245]
 gi|189340217|gb|ACD89620.1| tyrosyl-tRNA synthetase [Chlorobium limicola DSM 245]
          Length = 405

 Score =  362 bits (931), Expect = 5e-98,   Method: Composition-based stats.
 Identities = 95/389 (24%), Positives = 165/389 (42%), Gaps = 21/389 (5%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSF 86
           L  L +   +   +G D +   LH GH   L  L   Q  GH+ I ++G  T++IGDPS 
Sbjct: 31  LRSLQTGKPLKIKLGADPSRPDLHLGHSVVLKKLREFQDLGHEAILIIGDFTAMIGDPSG 90

Query: 87  RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGS 146
           + ++R  + ++E +EN +      S  +          +  N  WL  + + D++R + S
Sbjct: 91  KSKTRPQLSAEEARENGKSYFEQASKILD----AAKTTICYNADWLGKMSFSDVIR-LSS 145

Query: 147 FFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNI 206
            ++V RML  +    R +  + +S  EF Y + Q  D V L  +    +++GG+DQ  N+
Sbjct: 146 HYTVARMLERDDFERRYRSREPISIHEFLYPLAQGMDSVHLKND----VELGGTDQKFNL 201

Query: 207 ICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNID 265
           + G DL           +T  LL    G  KM K+L  AI  N     P + +    +I 
Sbjct: 202 LVGRDLQREYGIAPQVCITMELLVGTDGKEKMSKSLGNAICFN---DPPNDMYGKVLSIP 258

Query: 266 DADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAME 325
           D  + ++ + L T     +  +         EAK+ +A +I    +    A +A      
Sbjct: 259 DTLIETYHRLLVTGNKELLTTLRGHIADNPREAKRTLAKDIVAQYYSINAAREAEGHFDR 318

Query: 326 CFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIIS 385
            F       ++  +   +      + +  L+V  G A S +EARR ++ NA+ +N   I+
Sbjct: 319 IFVQKKAPDNIELVEFGQ----NSIAVTDLLVSLGAAPSKSEARRMIQQNAVTVNEEKIT 374

Query: 386 NEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +    + L D        L  GK+     
Sbjct: 375 DTNALVPLDDEPK----ILKAGKRKFYKI 399


>gi|117620349|ref|YP_857617.1| tyrosyl-tRNA synthetase [Aeromonas hydrophila subsp. hydrophila
           ATCC 7966]
 gi|117561756|gb|ABK38704.1| tyrosyl-tRNA synthetase [Aeromonas hydrophila subsp. hydrophila
           ATCC 7966]
          Length = 399

 Score =  362 bits (931), Expect = 5e-98,   Method: Composition-based stats.
 Identities = 95/420 (22%), Positives = 174/420 (41%), Gaps = 26/420 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M   +     I  +RG    +     +  L     +   +G D TA  +H GH   L  L
Sbjct: 1   MSQLEVALAEI--KRGAEEILVEEELVAKLKEGRPLRIKLGMDPTAPDIHLGHTVILNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GH+ I L+G  T+++GDPS ++ +R  +  + I+ N           +     +
Sbjct: 59  KTFQDLGHEVILLIGDFTAMVGDPSGKNATRPPLSEEAIKHNALTYAEQAFKILDPAKTR 118

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N TWL  +    +++ + +  +V RM+  +  + R    QS++  EF Y +LQ
Sbjct: 119 ----IEYNSTWLSELGATGMIK-LAAKQTVARMMERDDFKKRYSNGQSIAIHEFLYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGK 239
            YD V L  +    +++GG+DQ  N++ G +L +         L  PLL    G  KM K
Sbjct: 174 GYDSVALKAD----VELGGTDQKFNLLMGRELQKDAGMATQCVLMMPLLVGLDGVKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EIN 296
           + +  I ++    +P   +    +I D  + ++ + L+  P++EI+              
Sbjct: 230 SAANYIGVH---DAPGEMFGKIMSITDDLMWNYYELLSFRPLAEIEEFKAGIAAGTLNPR 286

Query: 297 EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLI 356
           + K  +A EI    H    AE A     + F  +     MP + ++ +    G+ +  L+
Sbjct: 287 DVKIWLAKEIIARYHDEAAAEAAHEDFTQRFSKNAIPDEMPEVELALE--GEGLAIANLL 344

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             A    +T+EA R +K  A+K++   + + K           G      GK+      +
Sbjct: 345 KDADLVATTSEALRMIKQGAVKVDGEKLEDGKA------LIGAGTAVYQVGKRKFARVTV 398


>gi|255655541|ref|ZP_05400950.1| tyrosyl-tRNA synthetase [Clostridium difficile QCD-23m63]
 gi|296451532|ref|ZP_06893267.1| tyrosine--tRNA ligase [Clostridium difficile NAP08]
 gi|296880119|ref|ZP_06904086.1| tyrosine--tRNA ligase [Clostridium difficile NAP07]
 gi|296259597|gb|EFH06457.1| tyrosine--tRNA ligase [Clostridium difficile NAP08]
 gi|296428844|gb|EFH14724.1| tyrosine--tRNA ligase [Clostridium difficile NAP07]
          Length = 402

 Score =  362 bits (930), Expect = 5e-98,   Method: Composition-based stats.
 Identities = 92/409 (22%), Positives = 175/409 (42%), Gaps = 31/409 (7%)

Query: 18  IHQISNPRELDILC-----SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPIS 72
           +  + + +EL             +   +G D +A  +H GH   L  +  LQ  GH+ + 
Sbjct: 15  VDDLIDEKELREKLIKSEKEGKPMIVKLGLDPSAPDIHLGHTVVLRKMKQLQDLGHQIVI 74

Query: 73  LMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL 132
           ++G  T  IGDP+ + ++R+ + ++++  N +  +      +     K   ++  N  WL
Sbjct: 75  IIGDFTGKIGDPTGKSKARKALTTEQVLANAKTYEEQIFKVLD----KEKTIVRFNSEWL 130

Query: 133 CSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYD 192
             + + D+++ + +  +V RML  E  + R + +  +S  EF Y ++QAYD + L    +
Sbjct: 131 AKLNFEDVIK-LAATITVARMLEREDFKKRYEGQMPISVHEFFYPLMQAYDSIAL----E 185

Query: 193 CRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEM 251
             +++GG+DQ  N++ G  L           +  PL+    G  KM K+L   I +++E 
Sbjct: 186 ADIELGGTDQRFNLLMGRSLQREFGMESQIVIMMPLIEGLDGKEKMSKSLGNYIGIDEEA 245

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSE---IDRMAKLQGKEINEAKKIIATEITT 308
                 +Q    I D  ++ +   +T +   E   I+   K       + K  +A EI T
Sbjct: 246 GI---MYQKSMEIPDELIIKYYNLVTDVHPDEVNKIESQLKDGSVNPRDIKMNLAREIVT 302

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
           + HG E A +A       F      + + TI + +D    G  L+ ++V      S +E 
Sbjct: 303 LYHGEESAREAEERFKSVFQKGQIPEDIQTIQVKED----GFDLIEVLVVNEIVKSKSEV 358

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           RR      +K+N   + +    +K         + +  GKK  +   L 
Sbjct: 359 RRLASQGGVKVNGEKVEDLSTIVKES------ELVVQIGKKKFVKIELV 401


>gi|325917548|ref|ZP_08179751.1| tyrosyl-tRNA synthetase [Xanthomonas vesicatoria ATCC 35937]
 gi|325536264|gb|EGD08057.1| tyrosyl-tRNA synthetase [Xanthomonas vesicatoria ATCC 35937]
          Length = 403

 Score =  362 bits (930), Expect = 5e-98,   Method: Composition-based stats.
 Identities = 97/398 (24%), Positives = 165/398 (41%), Gaps = 25/398 (6%)

Query: 25  RELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGD 83
            +L+     G       G+D TA  LH GH   L  +   Q+ GH+ I L+G  T +IGD
Sbjct: 22  DQLEARLKSGVPQRVKAGFDPTAPDLHLGHTVLLNKMRQFQELGHQVIFLIGDFTGMIGD 81

Query: 84  PSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLRE 143
           PS ++ +R+ +   ++  N    +      +     +    +  N  W   +   D+++ 
Sbjct: 82  PSGKNVTRKPLSRDDVLANARTYEEQVFKILDRERTE----VRFNSEWFGQMSAADMIK- 136

Query: 144 IGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQW 203
           + +  +V RML  +    R   +Q ++  EF Y ++Q YD V L  +    +++GG+DQ 
Sbjct: 137 LSAQHTVARMLERDDFAKRFAGQQPIAIHEFLYPLVQGYDSVALKAD----VELGGTDQK 192

Query: 204 GNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWR 262
            N++ G  L E         LT PLL    G  KM K+L   I +N+      +      
Sbjct: 193 FNLLMGRGLQEHYGQAPQVVLTMPLLEGLDGVAKMSKSLGNYIGINEPA---IDIVTKTM 249

Query: 263 NIDDADVVSFAKRLTT-LPMSEIDRMAKLQGK---EINEAKKIIATEITTMVHGREEAEK 318
            I D     +   L+  + ++E  R+ +          E K  +A E+TT  H    AE+
Sbjct: 250 KIGDELTWRWIDLLSFDIGVAEAARLKEQVASGALHPREVKLRLARELTTRFHDAATAEQ 309

Query: 319 AATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIK 378
           A             +  +P   +     + G+ + +L+  AG   S +EA R LK  A+K
Sbjct: 310 AIAGWHAVVTGQGDTSLLPLQQVVIP--AEGLRIASLLTAAGLTPSNSEANRKLKERAVK 367

Query: 379 INNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           I+  +I +         F       +  GK+N     L
Sbjct: 368 IDGEVIEDAGRV-----FAPGFEAVIQIGKRNFARVSL 400


>gi|115397901|ref|XP_001214542.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
 gi|114192733|gb|EAU34433.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
          Length = 608

 Score =  362 bits (930), Expect = 5e-98,   Method: Composition-based stats.
 Identities = 129/496 (26%), Positives = 215/496 (43%), Gaps = 86/496 (17%)

Query: 5   KSDFLSILSERGFIHQISNPREL-DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           +  F+  L ERG IH +   R+L   + ++  V  Y G D TA S+H GH+   M+L W 
Sbjct: 85  RKSFVEHLEERGLIHDVVGERDLLHRVFTEKRVGMYAGIDPTAPSMHVGHMLPFMVLAWG 144

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSF--------IK 115
              G     L+GG TS IGDP+ R + R  + S   + N+  +                +
Sbjct: 145 YVWGLPVTFLLGGSTSRIGDPTGRLKGREQVHSSVRKANMASMHMQLKKLGASIERYGKR 204

Query: 116 YGTGKTDAL---MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFL 172
           +G  K       ++NN TW   + ++++LR++GS   +  ML  E+V++R+ +   +SF 
Sbjct: 205 HGYEKKWIWKRALVNNNTWWNKVPFLEVLRDLGSHTRLGPMLGRETVKNRMAKGDGMSFA 264

Query: 173 EFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL---------------K 217
           EF Y ILQ +D+  + +N   ++Q+GGSDQ+GNI+ G+D  + +                
Sbjct: 265 EFAYPILQGWDWWTMFRN-GVQVQVGGSDQYGNILFGMDAVKAISKNTVMEQQQDPLEND 323

Query: 218 TPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT 277
             K    T+PLLT  SG K GK+   AIWL+K+MTS +  +Q++    D  V  + K  T
Sbjct: 324 LDKPIGFTTPLLTAPSGEKFGKSAGNAIWLDKDMTSTFELYQFFVRTPDDAVERYLKMFT 383

Query: 278 TLPMSEIDRMAKLQGKEI--NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQH 335
            +P+ EI ++ + Q ++     A+  +A E   ++HG+EEA+  A    + F     +  
Sbjct: 384 FIPLPEIAKIMEQQNQDPSKRVAQHALAYEFVELIHGKEEADAVALQHRQLFRPRSSTAE 443

Query: 336 M----PTIS------------------------------ISKDEVSRGMGLL------TL 355
                PT S                              +    V+    L+       +
Sbjct: 444 PTPLGPTTSPQSRAMRGPDASFVNPQSGNVHAPQTNFANMPNMNVTLPKSLVYNQTFNKI 503

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISN-----EKLQIKL---------QDFDSTGN 401
           +  AG  +S +E  R + +    +  S   +     + L             QDF   G 
Sbjct: 504 LWSAGLVSSKSEGHRVIANKGAYV-GSRPGDSGPMGDDLSFTPIQTWESTKTQDFIVDGE 562

Query: 402 IK-LSFGKKNHIICHL 416
           +  L  GK    +  +
Sbjct: 563 LLFLKLGKWKFKMVKI 578


>gi|317009215|gb|ADU79795.1| tyrosyl-tRNA synthetase [Helicobacter pylori India7]
          Length = 402

 Score =  362 bits (930), Expect = 6e-98,   Method: Composition-based stats.
 Identities = 105/426 (24%), Positives = 194/426 (45%), Gaps = 35/426 (8%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLT 55
           M    S  L  +  RG  ++I     ++ L  +            G+D TA  LH GH  
Sbjct: 1   MEQKVSIALKEIK-RGA-NEIIGLEYIEKLVRKYYETNERFIVKAGFDPTAPDLHLGHTV 58

Query: 56  QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK 115
            +  L  LQ+ G +   L+G  T++IGDP+ ++E+R+ +  +++ EN +  +      + 
Sbjct: 59  LIQKLALLQQYGARVKFLIGDFTAMIGDPTGKNETRKPLNREQVLENAKTYEEQIYKILD 118

Query: 116 YGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFN 175
               +    +  N TWL ++    ++ E+ + FSV RML  +    R K  + +S +EF 
Sbjct: 119 ----QKHTEVCFNSTWLDTLGAKGMI-ELCAKFSVARMLERDDFAKRYKENRPISIVEFL 173

Query: 176 YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASG 234
           Y +LQ YD V +  +    +++GG+DQ  N++ G  L        +   +T PLL    G
Sbjct: 174 YPLLQGYDSVAMDAD----IELGGNDQKFNLLVGRFLQRAYGLNKEQSIITMPLLEGLDG 229

Query: 235 -TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK---L 290
             KM K+L   + + +E   P   +    ++ D  +  +   L+   + EI+ +      
Sbjct: 230 VQKMSKSLGNYVGITEE---PNAMFGKIMSVSDDLMWRYYTLLSAKTLEEIEDLKHGILN 286

Query: 291 QGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGM 350
           Q       K+ +A EI    +  ++A KA     + F  ++  +      +S+ +   G+
Sbjct: 287 QTLHPKAVKEDLAGEIVARYYDNDQAFKAKEQFSKVFSANLLPE-----ILSESDFDEGV 341

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
           G+L ++ + GF  ST++ARR ++   +KIN  +I NE  +         GN  +  GKK 
Sbjct: 342 GILDVLKQIGFCPSTSQARRDIQGGGVKINQEVIKNESYRFVK------GNYVIQLGKKR 395

Query: 411 HIICHL 416
            +  ++
Sbjct: 396 FMKLNI 401


>gi|308182932|ref|YP_003927059.1| tyrosyl-tRNA synthetase [Helicobacter pylori PeCan4]
 gi|308065117|gb|ADO07009.1| tyrosyl-tRNA synthetase [Helicobacter pylori PeCan4]
          Length = 402

 Score =  362 bits (930), Expect = 6e-98,   Method: Composition-based stats.
 Identities = 105/426 (24%), Positives = 194/426 (45%), Gaps = 35/426 (8%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLT 55
           M    S  L  +  RG  ++I     ++ L  +            G+D TA  LH GH  
Sbjct: 1   MEQKVSTALKEIK-RGA-NEIIGLEYIEKLVRKYYETNERFIVKAGFDPTAPDLHLGHTV 58

Query: 56  QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK 115
            +  L  LQ+ G +   L+G  T++IGDP+ ++E+R+ +  +++ EN +  +      + 
Sbjct: 59  LIQKLALLQQYGARVKFLIGDFTAMIGDPTGKNETRKPLNREQVLENAKTYEEQIYKILD 118

Query: 116 YGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFN 175
               +    +  N TWL ++    ++ E+ + FSV RML  +    R K  + +S +EF 
Sbjct: 119 ----EKHTEVCFNSTWLDALGAKGMI-ELCAKFSVARMLERDDFTKRYKENRPISIVEFL 173

Query: 176 YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASG 234
           Y +LQ YD V +       +++GG+DQ  N++ G  L        +   +T PLL    G
Sbjct: 174 YPLLQGYDSVAM----GADIELGGNDQKFNLLVGRFLQRAYGLNKEQSIITMPLLEGLDG 229

Query: 235 -TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK---L 290
             KM K+L   + + +E   P   +    ++ D  +  +   L+   + EI+ +      
Sbjct: 230 VQKMSKSLGNYVGITEE---PNAMFGKIMSVSDDLMWRYYTLLSAKTLEEIEDLKHGILN 286

Query: 291 QGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGM 350
           Q       K+ +A EI    +  ++A KA     + F  ++    +P I + + +   G+
Sbjct: 287 QTLHPKAVKEDLAGEIVARYYDNDQAFKAKEQFSKVFSANL----LPEILL-ESDFDEGV 341

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
           G+L ++ + GF  ST++ARR ++   +KIN  ++ NE  +         GN  +  GKK 
Sbjct: 342 GILDVLKQIGFCPSTSQARRDIQGGGVKINQEVVKNESYRFVK------GNYVIQLGKKR 395

Query: 411 HIICHL 416
            +  ++
Sbjct: 396 FMKLNI 401


>gi|256826687|ref|YP_003150646.1| tyrosyl-tRNA synthetase [Cryptobacterium curtum DSM 15641]
 gi|256582830|gb|ACU93964.1| tyrosyl-tRNA synthetase [Cryptobacterium curtum DSM 15641]
          Length = 403

 Score =  362 bits (929), Expect = 7e-98,   Method: Composition-based stats.
 Identities = 105/400 (26%), Positives = 176/400 (44%), Gaps = 21/400 (5%)

Query: 19  HQISNPREL-DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGG 77
            QI     L + L     +   +G D TA  +H GH   L  L   Q  GH+   ++G G
Sbjct: 16  AQIVPEEALLEKLKRDRPLNIKLGVDPTAPDIHIGHAVPLRKLRTFQDLGHQVTLIIGDG 75

Query: 78  TSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKY 137
           T++IGDPS R+ +R  + S E+  N +         +          + +N  WL  +  
Sbjct: 76  TALIGDPSGRNSTRPQLTSDEVAANAQTYIDQAFKILD----PQKTTLRHNAEWLLDLNL 131

Query: 138 IDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQM 197
             LL+ I S F+V R+L  +   +R  +   +S  EF Y I+QAYD V +  +    +++
Sbjct: 132 EGLLK-IASNFTVARILERDDFHNRYTQNLPISVHEFLYPIMQAYDSVVIDAD----VEL 186

Query: 198 GGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYN 256
           GG+DQ  N++ G +L E++       LT PLL    G  KM K+    I L        +
Sbjct: 187 GGTDQLFNLLAGRELMEKMGKEPQVCLTLPLLEGTDGVRKMSKSYGNYIGLTDAAD---D 243

Query: 257 FWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAKKIIATEITTMVHGR 313
            +    +I D  +V + +  +T  + EIDR+ +         N+ K+ +A  I    HG 
Sbjct: 244 MFGKVMSIPDELMVKYYRLASTESVDEIDRLEEGLAAGSLHPNQVKRALARNIVAAYHGD 303

Query: 314 EEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGM-GLLTLIVKAGFATSTNEARRHL 372
             A +A  +    F      + +P  + S     +GM  L  ++ +A  A S  E RR +
Sbjct: 304 LAAIEAEVSFDRLFKNHDMPEDIPMFTGSLQPDEQGMVYLPKVLHEASLAKSAGEGRRLI 363

Query: 373 KSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
               +K+N + ++ +  QI   D +      +  GK+  +
Sbjct: 364 DGGGVKVNGTPLAAKSYQIAAGDLEGA---VIQVGKRRFV 400


>gi|312622823|ref|YP_004024436.1| tyrosyl-tRNA synthetase [Caldicellulosiruptor kronotskyensis 2002]
 gi|312203290|gb|ADQ46617.1| tyrosyl-tRNA synthetase [Caldicellulosiruptor kronotskyensis 2002]
          Length = 396

 Score =  362 bits (929), Expect = 7e-98,   Method: Composition-based stats.
 Identities = 104/406 (25%), Positives = 186/406 (45%), Gaps = 28/406 (6%)

Query: 16  GFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMG 75
           G    I+    ++ L     +   +G D     +H GH   L  L  LQ  GH  I ++G
Sbjct: 13  GAAEIITEEELVEKLKQDRPLNIKLGLDPNVPDVHLGHAVVLRKLKQLQDLGHNIILIIG 72

Query: 76  GGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSI 135
             T++IGDP+ + E+R+ +  +E+Q+N E  K      +          +  N  WL  +
Sbjct: 73  DFTAMIGDPTGKSETRKQLTKEEVQKNAEPFKQQILKILD----PQKTTIRYNSEWLEPM 128

Query: 136 KYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRL 195
            ++D++  + S ++V RML  E+ R R+++   LS  EF Y ++Q YD V +    +  +
Sbjct: 129 NFLDVI-NLASKYTVARMLERETFRQRMEKNLPLSIHEFFYPLMQGYDSVVI----EADV 183

Query: 196 QMGGSDQWGNIICGIDLGERLKTPK-LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTS 253
           ++G ++Q  NI+ G  L +         AL  P+L    G  KM K+L   I +N+    
Sbjct: 184 ELGATEQKFNILMGRTLQKEYGCKTIQVALLMPILVGTDGVNKMSKSLGNYIGINE---P 240

Query: 254 PYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAKKIIATEITTMV 310
           P   +    +I D  ++S+ +  T L   EI+ + +   +      +AK  +A EI  + 
Sbjct: 241 PNVMYGKVMSIPDEIMISYYELTTDLEPEEIEEIKRKLEEGTLHPRDAKMRLAREIVKLY 300

Query: 311 HGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARR 370
           HG E A KA    ++ F       ++P + +   +V     L   +V+    +ST+E  R
Sbjct: 301 HGEEAALKAEEEFIKVFQKKDIPDNIPEVELESSKV----YLPRFMVENKLCSSTSEGMR 356

Query: 371 HLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            +KS A+K+N   +++  ++++  D        L  GK   +   L
Sbjct: 357 LIKSGAVKLNGEKVNDLDIELQNGD-------VLQVGKLKFVKIKL 395


>gi|217032180|ref|ZP_03437679.1| hypothetical protein HPB128_186g46 [Helicobacter pylori B128]
 gi|298736478|ref|YP_003729004.1| tyrosyl-tRNA synthetase [Helicobacter pylori B8]
 gi|216946170|gb|EEC24779.1| hypothetical protein HPB128_186g46 [Helicobacter pylori B128]
 gi|298355668|emb|CBI66540.1| tyrosyl-tRNA synthetase [Helicobacter pylori B8]
          Length = 402

 Score =  362 bits (929), Expect = 7e-98,   Method: Composition-based stats.
 Identities = 103/418 (24%), Positives = 193/418 (46%), Gaps = 35/418 (8%)

Query: 9   LSILSERGFIHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           L  +  RG  ++I     ++ L  +            G+D TA  LH GH   +  L  L
Sbjct: 9   LKEIK-RGA-NEIIGLEYIEKLVRKYYETNERFIVKAGFDPTAPDLHLGHTVLIQKLALL 66

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q+ G +   L+G  T++IGDP+ ++E+R+ +  +++ EN +  +      +     +   
Sbjct: 67  QQYGARVKFLIGDFTAMIGDPTGKNETRKPLNREQVLENAKTYEEQIYKILD----EKHT 122

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            +  N TWL ++    ++ E+ + FSV RML  +    R K  + +S +EF Y +LQ YD
Sbjct: 123 EVCFNSTWLDALGAKGMI-ELCAKFSVARMLERDDFAKRHKENRPISIVEFLYPLLQGYD 181

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASG-TKMGKTL 241
            V +  +    +++GG+DQ  N++ G  L        +   +T PLL    G  KM K+L
Sbjct: 182 SVAMDAD----IELGGNDQKFNLLVGRFLQRAYGLNKEQSVITMPLLEGLDGVQKMSKSL 237

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK---LQGKEINEA 298
              + + +E   P   +    ++ D  +  +   L+T  + EI+ +      Q       
Sbjct: 238 GNYVGITEE---PNAMFGKIMSVSDDLMWRYYTLLSTKTLEEIEDLKHGILNQTLHPKAV 294

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVK 358
           K+ +A EI    +  ++A KA     + F  ++  +      +S+ +   G+G+L ++ +
Sbjct: 295 KEKLAGEIVARYYDNDQAIKAKEQFSKVFSANLLPE-----ILSESDFDEGVGILDVLKQ 349

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            GF  ST++ARR ++   +KIN  +I +E  +         GN  +  GKK  +  ++
Sbjct: 350 IGFCPSTSQARRDIQGGGVKINQEVIKDESYRFVK------GNYVIQLGKKRFMKLNI 401


>gi|208434686|ref|YP_002266352.1| tyrosyl-tRNA synthetase [Helicobacter pylori G27]
 gi|208432615|gb|ACI27486.1| tyrosyl-tRNA synthetase [Helicobacter pylori G27]
          Length = 402

 Score =  362 bits (929), Expect = 7e-98,   Method: Composition-based stats.
 Identities = 104/426 (24%), Positives = 193/426 (45%), Gaps = 35/426 (8%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLT 55
           M    S  L  +  RG  ++I     ++ L  +            G+D TA  LH GH  
Sbjct: 1   MEQKISVALKEIK-RGA-NEIIGLEYIEKLVRKYYETNERFIVKAGFDPTAPDLHLGHTV 58

Query: 56  QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK 115
            +  L  LQ+ G +   L+G  T++IGDP+ ++E+R+ +  +++ EN +  +      + 
Sbjct: 59  LIQKLALLQQYGARVKFLIGDFTAMIGDPTGKNETRKPLNREQVLENAKTYEEQIYKILD 118

Query: 116 YGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFN 175
               +    +  N TWL ++    ++ E+ + FSV RML  +    R K  + +S +EF 
Sbjct: 119 ----QKHTEVCFNSTWLDALGAKGMI-ELCAKFSVARMLERDDFAKRHKENRPISIVEFL 173

Query: 176 YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASG 234
           Y +LQ YD V +       +++GG+DQ  N++ G  L        +   +T PLL    G
Sbjct: 174 YPLLQGYDSVAM----GADIELGGNDQKFNLLVGRFLQRAYGLNKEQSIITMPLLEGLDG 229

Query: 235 -TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK---L 290
             KM K+L   + + +E   P   +    ++ D  +  +   L+   + EI+ +      
Sbjct: 230 VQKMSKSLGNYVGITEE---PNAMFGKIMSVSDDLMWRYYTLLSAKTLEEIEDLKHGILN 286

Query: 291 QGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGM 350
           Q       K+ +A EI    +  ++A KA     + F  ++  +      +S+ +   G+
Sbjct: 287 QTLHPKAVKEDLAGEIVARYYDNDQAFKAKEQFSKVFSANLLPE-----ILSESDFDEGV 341

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
           G+L ++ + GF  ST++ARR ++   +KIN  +I +E  +         GN  +  GKK 
Sbjct: 342 GILDVLKQIGFCPSTSQARRDIQGGGVKINQEVIKDESYRFVK------GNYVIQLGKKR 395

Query: 411 HIICHL 416
            +  ++
Sbjct: 396 FMKLNI 401


>gi|308184559|ref|YP_003928692.1| tyrosyl-tRNA synthetase [Helicobacter pylori SJM180]
 gi|308060479|gb|ADO02375.1| tyrosyl-tRNA synthetase [Helicobacter pylori SJM180]
          Length = 402

 Score =  362 bits (929), Expect = 7e-98,   Method: Composition-based stats.
 Identities = 104/417 (24%), Positives = 192/417 (46%), Gaps = 36/417 (8%)

Query: 12  LSE--RGFIHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           L E  RG  ++I     ++ L  +            G+D TA  LH GH   +  L  LQ
Sbjct: 9   LKEIARGA-NEIIGLEYIEKLVRKYYETNERFIVKAGFDPTAPDLHLGHTVLIQKLALLQ 67

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + G +   L+G  T++IGDP+ ++E+R+ +  +++ EN +  +      +     +    
Sbjct: 68  QYGARVKFLIGDFTAMIGDPTGKNETRKPLNREQVLENAKTYEEQIYKILDQQHTE---- 123

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           +  N TWL ++    ++ E+ + FSV RML  +    R K  + +S +EF Y +LQ YD 
Sbjct: 124 VCFNSTWLDALGTKGMI-ELCAKFSVARMLERDDFTKRYKENRPISIVEFLYPLLQGYDS 182

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASG-TKMGKTLS 242
           V +  +    +++GG+DQ  N++ G  L        +   +T PLL    G  KM K+L 
Sbjct: 183 VAMDAD----IELGGNDQKFNLLVGRFLQRAYGLNKEQSIITMPLLEGLDGVQKMSKSLG 238

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK---LQGKEINEAK 299
             + + +E   P   +    ++ D  +  +   L+   + EI+ +      Q       K
Sbjct: 239 NYVGITEE---PNAMFGKIMSVSDDLMWRYYTLLSAKTLEEIEDLKHGILNQTLHPKAVK 295

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKA 359
           + +A EI    +  ++A KA     + F  ++  +      +S+ +   G+G+L ++ + 
Sbjct: 296 EELAGEIVARYYNNDQAFKAKEQFSKVFSANLLPE-----ILSESDFDEGVGILDVLKQI 350

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           GF  ST++ARR ++   +KIN  +I NE  +         GN  +  GKK  +  ++
Sbjct: 351 GFCPSTSQARRDIQGGGVKINQEVIKNESYRFVK------GNYVIQLGKKRFMKLNI 401


>gi|317010991|gb|ADU84738.1| tyrosyl-tRNA synthetase [Helicobacter pylori SouthAfrica7]
          Length = 402

 Score =  362 bits (929), Expect = 7e-98,   Method: Composition-based stats.
 Identities = 104/426 (24%), Positives = 195/426 (45%), Gaps = 35/426 (8%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLT 55
           M    S  L  +  RG  ++I     ++ L  +            G+D TA  LH GH  
Sbjct: 1   MEQKVSIALKEIK-RGA-NEIIGLEYIEKLVRKYYETNERFIVKAGFDPTAPDLHLGHTV 58

Query: 56  QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK 115
            +  L  LQ+ G +   L+G  T++IGDP+ ++E+R+ +  +++ EN +  +      + 
Sbjct: 59  LIQKLALLQQYGARVKFLIGDFTAMIGDPTGKNETRKPLNREQVLENAKTYEEQIYKILD 118

Query: 116 YGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFN 175
               +    +  N TWL ++    ++ E+ + FSV RML  +    R K  + +S +EF 
Sbjct: 119 ----QKHTEVCFNSTWLDALGAKGVV-ELCAKFSVARMLERDDFTKRYKENRPISIVEFL 173

Query: 176 YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASG 234
           Y +LQ YD V +  +    +++GG+DQ  N++ G  L        +   +T PLL    G
Sbjct: 174 YPLLQGYDSVAMDAD----IELGGNDQKFNLLVGRFLQRAYGLNKEQSVITMPLLEGLDG 229

Query: 235 -TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK---L 290
             KM K+L   + + +E   P   +    ++ D  +  +   L+   + EI+ +      
Sbjct: 230 VQKMSKSLGNYVGITEE---PNAMFGKLMSVSDDLMWRYYTLLSAKTLEEIEDLKHGILN 286

Query: 291 QGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGM 350
           Q       K+ +A+EI    +  ++A KA     + F  ++  +      +S+ +   G+
Sbjct: 287 QTLHPKAVKEDLASEIVARYYDNDQAIKAKEQFSKVFSANLLPE-----ILSESDFDEGV 341

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
           G+L ++ + GF  ST++ARR ++   ++IN  +I NE  +         GN  +  GKK 
Sbjct: 342 GILDVLKQIGFCPSTSQARRDIQGGGVRINQEVIKNESYRFVK------GNYVIQLGKKR 395

Query: 411 HIICHL 416
            +  ++
Sbjct: 396 FMKLNI 401


>gi|325271186|ref|ZP_08137739.1| tyrosyl-tRNA synthetase [Pseudomonas sp. TJI-51]
 gi|324103697|gb|EGC00991.1| tyrosyl-tRNA synthetase [Pseudomonas sp. TJI-51]
          Length = 399

 Score =  362 bits (929), Expect = 8e-98,   Method: Composition-based stats.
 Identities = 99/408 (24%), Positives = 172/408 (42%), Gaps = 24/408 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG    +     ++ L     +    G+D TA  LH GH   +  L   Q+ GH+ I
Sbjct: 10  LIKRGAEEVLVESELVEKLKRGQPLRIKAGFDPTAPDLHLGHTVLINKLRQFQELGHQVI 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T +IGDPS +  +R  +  +++ +N E  K      +     +    +  N TW
Sbjct: 70  FLIGDFTGMIGDPSGKSATRPPLTREQVLDNAETYKQQVFKILDPAKTE----VAFNSTW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +  +   D +R + S ++V RML  +    R    Q ++  EF Y ++Q YD V L  + 
Sbjct: 126 MDKLTPADFIR-LASQYTVARMLERDDFDKRYTTNQPIAIHEFLYPLVQGYDSVALKAD- 183

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G +L           +T PLL    G  KM K+L   + + + 
Sbjct: 184 ---VELGGTDQKFNLLMGRELQRAYGQEAQNIVTMPLLEGLDGVKKMSKSLGNYVGIQE- 239

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATEITT 308
             +P   +    +I D  +  + + L+   M EI++       G    + K  +A EI  
Sbjct: 240 --APGVMYSKLVSIPDTLMWRYFELLSFRSMEEIEQFRADVANGANPRDIKIKLAEEIVA 297

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
             HG E A  A  AA          + +P + +   E   G+ +  ++ +AG   ++ +A
Sbjct: 298 RFHGEEAAANAHRAAGNRMKEGELPEDLPEVEVVSAE---GLPIAAVLNRAGLVKNSAQA 354

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           R  L + A      +  +  +  K   F          GKK+     L
Sbjct: 355 RDLLSAGA------VKVDGVVVDKDFLFGLGATHVCQAGKKSFGRVTL 396


>gi|307637465|gb|ADN79915.1| Tyrosyl-tRNA synthetase [Helicobacter pylori 908]
 gi|325996055|gb|ADZ51460.1| Tyrosyl-tRNA synthetase [Helicobacter pylori 2018]
 gi|325997650|gb|ADZ49858.1| Tyrosyl-tRNA synthetase [Helicobacter pylori 2017]
          Length = 402

 Score =  362 bits (929), Expect = 8e-98,   Method: Composition-based stats.
 Identities = 104/426 (24%), Positives = 195/426 (45%), Gaps = 35/426 (8%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLT 55
           M    S  L  +  RG  ++I     ++ L  +            G+D TA  LH GH  
Sbjct: 1   MEQKISVALKEIK-RGA-NEIIGLEYIEKLVRKYYETNERFIVKAGFDPTAPDLHLGHTV 58

Query: 56  QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK 115
            +  L  LQ+ G +   L+G  T++IGDP+ ++E+R+ +  +++ EN +  +      + 
Sbjct: 59  LIQKLALLQQYGARVKFLIGDFTAMIGDPTGKNETRKPLNREQVLENAKTYEEQIYKILD 118

Query: 116 YGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFN 175
               +    +  N TWL ++    ++ E+ + FSV RML  +    R K  + +S +EF 
Sbjct: 119 ----QRHTEVCFNSTWLDTLGAKGMI-ELCAKFSVARMLERDDFAKRYKENRPISIVEFL 173

Query: 176 YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASG 234
           Y +LQ YD V +       +++GG+DQ  N++ G  L        +   +T PLL    G
Sbjct: 174 YPLLQGYDSVAM----GADIELGGNDQKFNLLVGRFLQRAYGLNKEQSIITMPLLEGLDG 229

Query: 235 -TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK---L 290
             KM K+L   + + +E   P   +    ++ D  +  +   L+   + EI+ +      
Sbjct: 230 VQKMSKSLGNYVGITEE---PNAMFGKIMSVSDDLMWRYYTLLSAKTLEEIEDLKHGILH 286

Query: 291 QGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGM 350
           Q       K+ +A+EI    +  ++A KA     + F  ++    +P I + + +   G+
Sbjct: 287 QTLHPKAVKEDLASEIVARYYDNDQAFKAKEQFSKVFSANL----LPEILL-ESDFDEGV 341

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
           G+L ++ + GF  ST++ARR ++   +KIN  ++ +E  +         GN  +  GKK 
Sbjct: 342 GVLDVLKQIGFCPSTSQARRDIQGGGVKINQEVVKDESYRFVK------GNYVIQLGKKR 395

Query: 411 HIICHL 416
            +  ++
Sbjct: 396 FMKLNI 401


>gi|320035901|gb|EFW17841.1| tyrosyl-tRNA synthetase [Coccidioides posadasii str. Silveira]
          Length = 635

 Score =  362 bits (929), Expect = 8e-98,   Method: Composition-based stats.
 Identities = 132/486 (27%), Positives = 208/486 (42%), Gaps = 74/486 (15%)

Query: 5   KSDFLSILSERGFIHQIS-NPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           K  FLS L ERG ++ +      LD L ++  V  Y G D TA SLH GH+   M+L W 
Sbjct: 79  KQSFLSFLEERGLVNSVVGQRDALDKLITRKRVGFYAGVDPTAPSLHIGHMLPFMILGWA 138

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSS----FIKYGTG 119
              G K + L+GG T+ IGDP+ R E R +M     + NI  I          F KYG  
Sbjct: 139 YVHGLKAVFLIGGSTAKIGDPTGRLEGRPLMDGATRRANIANIHLQLKRLGFSFEKYGRK 198

Query: 120 KTDAL-------MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFL 172
                       + NN TW       +++  +G+   +  ML  + V+SRL   + +S  
Sbjct: 199 HGFEWEWAWRRALENNNTWWNKQSLKEVMEVLGTSLRLGPMLGRDYVKSRLASGEGMSIA 258

Query: 173 EFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL---------------- 216
           EF Y I+Q +DF  L +    ++Q+GGSDQ+GNI+ G+D  + +                
Sbjct: 259 EFCYPIMQGWDFWYLFQRK-VQVQVGGSDQYGNILFGMDAIKGILKANPESEWAPKKDED 317

Query: 217 -KTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKR 275
                 + +T+PLLTTASG K+GK+   A+WL+K+MTS Y+ +QY+  + D+DV  + K 
Sbjct: 318 PDLANPYGITTPLLTTASGEKIGKSAGNAVWLDKDMTSCYDLYQYFVRVADSDVERYLKM 377

Query: 276 LTTLPMSEIDRMAKLQGKEI--NEAKKIIATEITTMVHGREEAEKAATAAMECF----DM 329
            T +P   I  + +   K+     A+  +A E   ++HG   AE+AA      F      
Sbjct: 378 FTFVPTPAIKELMEEHAKDPSKRVAQHKLAREFVELIHGSLSAEQAAKDHRTLFMTKASA 437

Query: 330 SIHSQHMPTISISKDEVSRGM------------------GLL------TLIVKAGFATST 365
                    I  ++ + + G                    L+       ++  AG  +S 
Sbjct: 438 GAPEGLAAEIEHAETDNAEGKHQKLHAFETATPHIILPRSLVINQFFHKVLWSAGMVSSK 497

Query: 366 NEARRHLKSNAIKI-----------NNS---IISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           +E  R + +N + +           +      +      I  +       + L  GK N 
Sbjct: 498 SEGFRLIVNNGVHVASRSDSREVMGDGVSYIPVKTWPANITEKFVIDGRLLILRIGKWNL 557

Query: 412 IICHLC 417
            I  + 
Sbjct: 558 KIIKIV 563


>gi|303321247|ref|XP_003070618.1| tyrosyl-tRNA synthetase, putative [Coccidioides posadasii C735
           delta SOWgp]
 gi|240110314|gb|EER28473.1| tyrosyl-tRNA synthetase, putative [Coccidioides posadasii C735
           delta SOWgp]
          Length = 635

 Score =  361 bits (928), Expect = 8e-98,   Method: Composition-based stats.
 Identities = 132/486 (27%), Positives = 208/486 (42%), Gaps = 74/486 (15%)

Query: 5   KSDFLSILSERGFIHQIS-NPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           K  FLS L ERG ++ +      LD L ++  V  Y G D TA SLH GH+   M+L W 
Sbjct: 79  KQSFLSFLEERGLVNSVVGQRDALDKLITRKRVGFYAGVDPTAPSLHIGHMLPFMILGWA 138

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSS----FIKYGTG 119
              G K + L+GG T+ IGDP+ R E R +M     + NI  I          F KYG  
Sbjct: 139 YVHGLKAVFLIGGSTAKIGDPTGRLEGRPLMDGATRRANIANIHLQLKRLGFSFEKYGRK 198

Query: 120 KTDAL-------MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFL 172
                       + NN TW       +++  +G+   +  ML  + V+SRL   + +S  
Sbjct: 199 HGFEWEWAWRRALENNNTWWNKQSLKEVMEVLGTSLRLGPMLGRDYVKSRLASGEGMSIA 258

Query: 173 EFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL---------------- 216
           EF Y I+Q +DF  L +    ++Q+GGSDQ+GNI+ G+D  + +                
Sbjct: 259 EFCYPIMQGWDFWYLFQRK-VQVQVGGSDQYGNILFGMDAIKGILKANPESEWAPKKDED 317

Query: 217 -KTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKR 275
                 + +T+PLLTTASG K+GK+   A+WL+K+MTS Y+ +QY+  + D+DV  + K 
Sbjct: 318 PDLANPYGITTPLLTTASGEKIGKSAGNAVWLDKDMTSCYDLYQYFVRVADSDVERYLKM 377

Query: 276 LTTLPMSEIDRMAKLQGKEI--NEAKKIIATEITTMVHGREEAEKAATAAMECF----DM 329
            T +P   I  + +   K+     A+  +A E   ++HG   AE+AA      F      
Sbjct: 378 FTFVPTPAIKELMEEHAKDPSKRVAQHKLAREFVELIHGSLSAEQAAKDHRTLFMTKASA 437

Query: 330 SIHSQHMPTISISKDEVSRGM------------------GLL------TLIVKAGFATST 365
                    I  ++ + + G                    L+       ++  AG  +S 
Sbjct: 438 GAPEGLAAEIEHAETDNAEGKHQKLHAFETATPHIILPRSLVINQFFHKVLWSAGMVSSK 497

Query: 366 NEARRHLKSNAIKI-----------NNS---IISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           +E  R + +N + +           +      +      I  +       + L  GK N 
Sbjct: 498 SEGFRLIVNNGVHVASRSDSREVMGDGVSYIPVKTWPANITEKFVIDGRLLILRIGKWNL 557

Query: 412 IICHLC 417
            I  + 
Sbjct: 558 KIIKIV 563


>gi|71894632|ref|YP_278740.1| tyrosyl tRNA synthetase [Mycoplasma synoviae 53]
 gi|97201683|sp|Q4A5E2|SYY_MYCS5 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|71851420|gb|AAZ44029.1| tyrosyl tRNA synthetase [Mycoplasma synoviae 53]
          Length = 411

 Score =  361 bits (928), Expect = 9e-98,   Method: Composition-based stats.
 Identities = 136/421 (32%), Positives = 218/421 (51%), Gaps = 26/421 (6%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L+ L +R  +  ISN  +   L     V  Y+G+D TA SLH G+  Q++ L   +K  
Sbjct: 4   VLTELRDREILKDISNEEKFLSLPKNSGV--YVGFDPTADSLHLGNYVQIVNLIRFKKHN 61

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
              ++++GG T +IGDPSFR   R ++ ++E+ +N  KIK    SF           + +
Sbjct: 62  WNALAVLGGATGMIGDPSFRSTERVLLSTEELLKNKNKIKSQLESF--------GLKVFD 113

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N      I ++D L+ IG   +V+ ML+ +SV+ RL   Q LSF EF+Y I+Q YDF+ L
Sbjct: 114 NYEIYKDISFLDFLKNIGKLINVSYMLAKDSVKDRLA--QGLSFTEFSYQIIQGYDFLHL 171

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERL--KTPKLFALTSPLLTTASGTKMGKT-LSGA 244
            +N D  +Q GGSDQWGNI  GI++  ++     K  A+T+ LLT ++G K GK+   G 
Sbjct: 172 YQNQDIFVQYGGSDQWGNITTGIEMISKVVGDNHKAIAITANLLTDSNGNKFGKSTGGGN 231

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKII 302
           +WL+ + T P++ +Q+  N  D++V    K LT L +SEI  +     K   +  A+K +
Sbjct: 232 LWLDAQKTKPFDMYQFLINQPDSEVEKLLKWLTFLEISEIKDLVNKHNKNPKDRLAQKAL 291

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIH-----SQHMPTI--SISKDEVSRGMGLLTL 355
           A E+   +HG+  AE     +   F++S+       ++M      I   EV +G+ L+  
Sbjct: 292 AYEVIKDIHGKSAAENCTFLSEMLFNLSLDLSKVTLENMEFAYNQIESFEVEKGVNLVNF 351

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +V+     S   AR  + S ++K N   I +E   +   ++       L  GKK  +IC 
Sbjct: 352 LVENKILQSKRLAREFIASKSLKFNYEPI-DEDFSVS-SNYFEGKYATLHLGKKKILICK 409

Query: 416 L 416
           +
Sbjct: 410 V 410


>gi|188578877|ref|YP_001915806.1| tyrosyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|188523329|gb|ACD61274.1| tyrosyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae PXO99A]
          Length = 403

 Score =  361 bits (928), Expect = 9e-98,   Method: Composition-based stats.
 Identities = 99/412 (24%), Positives = 173/412 (41%), Gaps = 26/412 (6%)

Query: 12  LSERGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           L  RG   +I    +L+   + G  +    G+D TA  LH GH   L  +   Q+ GH+ 
Sbjct: 10  LIGRGA-EEILKLDQLEARLTSGVPLRVKAGFDPTAPDLHLGHTVLLNKMRQFQQLGHQV 68

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           I L+G  T +IGDPS ++ +R+ +  +++  N    +      +     +    +  N  
Sbjct: 69  IFLIGDFTGMIGDPSGKNATRKPLSREDVLANARTYEEQVFKILDRERTE----VRFNSE 124

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           W   +  +D+++ + +  +V RML  +    R   +Q ++  EF Y ++Q YD V L  +
Sbjct: 125 WFGQMSAVDMIK-LSAQHTVARMLERDDFAKRFGSQQPIAIHEFLYPLVQGYDSVALRAD 183

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNK 249
               +++GG+DQ  N++ G  L E         LT PLL    G  KM K+L   I +N+
Sbjct: 184 ----VELGGTDQKFNLLMGRGLQEHYGQAPQIVLTMPLLEGLDGVAKMSKSLGNYIGINE 239

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLT-TLPMSEIDRMAKLQGK---EINEAKKIIATE 305
                 +       I D     +   L+  + ++E  R+ +          E K  +A E
Sbjct: 240 PA---IDIVTKTMKIGDELTWRWIDLLSLDISVAEAVRLKEQVTSGELHPREVKLRLARE 296

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           + T  H    AE+A             +  +P   +     + G+ + +L+  AG   S 
Sbjct: 297 LATRFHDAATAEQAIAGWHAVVTGQGDTSLLPLQEVVVP--AEGLRIASLLTAAGLTPSN 354

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           +EA R LK  A+KI+  ++ +         F       +  GK+N     L 
Sbjct: 355 SEATRKLKERAVKIDGEVLEDATRV-----FTQGFEGVIQVGKRNFARVSLV 401


>gi|91202965|emb|CAJ72604.1| strongly similar to tyrosyl-tRNA ligase [Candidatus Kuenenia
           stuttgartiensis]
          Length = 404

 Score =  361 bits (928), Expect = 9e-98,   Method: Composition-based stats.
 Identities = 101/422 (23%), Positives = 187/422 (44%), Gaps = 25/422 (5%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDI----LCSQGVVTAYIGYDLTASSLHAGHLTQ 56
           MP   ++ + IL  RG +  +S    +      +  +  +   +G D TA  +H G+   
Sbjct: 1   MPKDVNEQMEILL-RGTVDIVSKGELIKKIDRSMQEKRPLRVKLGLDPTAPDIHIGNAIP 59

Query: 57  LMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY 116
           +  L   Q  GH  I ++G  T+++GDPS  +++R M+   ++ EN +         +  
Sbjct: 60  IHKLRAFQSLGHTAILIIGDYTAVVGDPSGVNKTRPMITHDKVLENAKTYLTQAGKILDM 119

Query: 117 GTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNY 176
              +    ++ N  W  S+ + D+++ + S  +V RM+  +    R K    +S  EF Y
Sbjct: 120 DKTE----VVYNSKWFKSMTFNDVIQLV-SKMTVARMMERDDFSKRYKAGSPISLHEFIY 174

Query: 177 MILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-T 235
            ++Q YD + +  +    +++GG+DQ  +++ G DL +         LT+ LL    G  
Sbjct: 175 PLMQGYDSIMVKND----VELGGTDQLFSLLVGRDLQKDAGMEPQVVLTTSLLEGIDGNK 230

Query: 236 KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI 295
           KM K+L+  I + +        +    +I D  +  + +  T + + +I ++   +    
Sbjct: 231 KMSKSLNNYIGITEPSR---EMFGKVMSIPDNLMRKYFELATDVSIEDIQQLLDEKT-HP 286

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLT 354
             AK  +A  I T  H  + AE AA      F        +P ISI   E+  G + +  
Sbjct: 287 RTAKVALAKAIVTRYHNLQAAEAAAEEFDRVFKEGALPDEIPIISIPDGELENGKIWITK 346

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           LIV   FA +  EARR ++   + +N+  I++  L I++     T  + L  GK+     
Sbjct: 347 LIVSCKFAATNGEARRLIQQGGVSVNSETINDPTLNIEI-----TPGMTLKVGKRRFAKI 401

Query: 415 HL 416
            L
Sbjct: 402 VL 403


>gi|17230474|ref|NP_487022.1| tyrosyl-tRNA synthetase [Nostoc sp. PCC 7120]
 gi|81771136|sp|Q8YSU9|SYY_ANASP RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|17132076|dbj|BAB74681.1| tyrosyl tRNA synthetase [Nostoc sp. PCC 7120]
          Length = 398

 Score =  361 bits (928), Expect = 9e-98,   Method: Composition-based stats.
 Identities = 91/396 (22%), Positives = 166/396 (41%), Gaps = 26/396 (6%)

Query: 22  SNPRELDILCS--QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTS 79
           S+   L+   +     +    G D T + +H GH   +  L   Q  GH  + ++G  T+
Sbjct: 24  SDIESLEKRLATTDRPLRVKYGIDPTGADIHLGHSIPMRKLRGFQDAGHTAVLIIGDFTA 83

Query: 80  IIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYID 139
            IGDP+ + E RR +  +++++N +         + + T      +  N  WL  +  + 
Sbjct: 84  RIGDPTGKSEMRRQLTEEDVKQNAQTYLDQVRPILDFDTP-GRLEVRYNSEWLSRLD-LG 141

Query: 140 LLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGG 199
            + E+ +  +V +ML+ E    R K+E  +   EF Y ++Q YD V +    +  +++GG
Sbjct: 142 KITELLATMTVGQMLAKEGFADRYKKENPIFLHEFLYPLMQGYDSVAI----EADVELGG 197

Query: 200 SDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFW 258
           +DQ  NI  G DL         F +  P+L    G  KM K+L   + L++    P   +
Sbjct: 198 TDQKFNIAVGRDLQRHFGQKPQFGVLLPILIGTDGVQKMSKSLGNYVSLSE---HPGQKY 254

Query: 259 QYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEK 318
           Q  + + D  +  + + LT LP+  +            + + ++A EI    HG + A +
Sbjct: 255 QKLQGVPDVLLKDYFELLTNLPIDALPE-------NPRDRQMLLAWEIVKQYHGEQAANE 307

Query: 319 AATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIK 378
           A  AA            +P  S+S       + L  L+   G   ST E +R ++   ++
Sbjct: 308 AKEAAQS----GGKEGAVPEFSLSNVS-QFPVKLAYLLGATGLCKSTGEGKRKIQEGGVR 362

Query: 379 INNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           ++   IS+     +  D        L  GK   +  
Sbjct: 363 LDGDRISDADTTFQQPDELQGR--VLQVGKNKFMRL 396


>gi|297172406|gb|ADI23380.1| tyrosyl-tRNA synthetase [uncultured gamma proteobacterium
           HF0770_28K04]
          Length = 404

 Score =  361 bits (928), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 108/422 (25%), Positives = 189/422 (44%), Gaps = 25/422 (5%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M +     L I  +RG    +           +  +   +G+D TA  LH GH   +  +
Sbjct: 1   MISKDKQLLEI--QRGTEEILVEEEFTKRFHQKKPLKIKVGFDPTAPDLHLGHTIIINKM 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+ I L+G  T +IGDPS  +E+R ++  ++I EN    +      +     +
Sbjct: 59  RQFQEFGHEIIFLIGDFTGMIGDPSGVNETRPVLTREQIDENAATYEKQIFKILDKDLTR 118

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N +W+  +    L+ EI S ++V RML  +  ++R K    +S  E  Y ++Q
Sbjct: 119 ----IEFNSSWMQQVNSSKLI-EIASKYTVARMLERDDFKNRFKTGNPISIHELLYPLVQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGK 239
           AYD V L    +  +++GG+DQ  N++ G  L +    P   A+T PLL    G  KM K
Sbjct: 174 AYDSVAL----EVDVELGGTDQKFNLLVGRHLQQLYGQPPQTAITLPLLEGLDGVKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINE 297
           T +  I L     SP +      +I D  +  + K L+   + EI   +    +GK   +
Sbjct: 230 TANNYIALT---DSPKDMLGKIMSISDELMWRYFKLLSARSLDEIGLLQKQVKKGKNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLL---T 354
            K ++A EI    H ++ ++ A  + +  F      + + ++SI+  EV    G++    
Sbjct: 287 IKFLLAEEIVERFHDKQSSDDAKASFLRQFQQGQMPEEIKSVSINYSEVESEPGIVNMAK 346

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           ++  A   TS +E  R +K+ ++++    I   +LQ      D+     LSFGK +    
Sbjct: 347 VLYLANLVTSVSEGHRAIKAGSVRLEGEKIERSQLQ-----MDANSRHILSFGKHHFAKV 401

Query: 415 HL 416
             
Sbjct: 402 EF 403


>gi|166710378|ref|ZP_02241585.1| tyrosyl-tRNA synthetase [Xanthomonas oryzae pv. oryzicola BLS256]
          Length = 403

 Score =  361 bits (928), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 99/412 (24%), Positives = 172/412 (41%), Gaps = 26/412 (6%)

Query: 12  LSERGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           L  RG   +I    +L+   + G  +    G+D TA  LH GH   L  +   Q+ GH+ 
Sbjct: 10  LIGRGA-EEILKLDQLEARLTSGVPLRVKAGFDPTAPDLHLGHTVLLNKMRQFQQLGHQV 68

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           I L+G  T +IGDPS ++ +R+ +  +++  N    +      +     +    +  N  
Sbjct: 69  IFLIGDFTGMIGDPSGKNATRKPLSREDVLANARTYEEQVFKILDRERTE----VRFNSE 124

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           W   +   D+++ + +  +V RML  +    R   +Q ++  EF Y ++Q YD V L  +
Sbjct: 125 WFGQMSAADMIK-LSAQHTVARMLERDDFAKRFGSQQPIAIHEFLYPLVQGYDSVALKAD 183

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNK 249
               +++GG+DQ  N++ G  L E         LT PLL    G  KM K+L   I +N+
Sbjct: 184 ----VELGGTDQKFNLLMGRGLQEHYGQAPQIVLTMPLLEGLDGVAKMSKSLGNYIGINE 239

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTT-LPMSEIDRMAKLQGK---EINEAKKIIATE 305
                 +       I D     +   L+  + ++E  R+ +          E K  +A E
Sbjct: 240 PA---IDIVTKTMKIGDELTWRWIDLLSFDISVAEAVRLKEQVTSGELHPREVKLRLARE 296

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           + T  H    AE+A             +  +P   +     + G+ + +L+  AG   S 
Sbjct: 297 LATRFHDAVTAEQAIAGWHAVVTGQGDTSLLPLQEVVVP--AEGLRIASLLTAAGLTPSN 354

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           +EA R LK  A+KI+  ++ +         F       +  GK+N     L 
Sbjct: 355 SEATRKLKERAVKIDGEVLEDATRV-----FTQGFEGVIQVGKRNFARVSLV 401


>gi|32491087|ref|NP_871341.1| hypothetical protein WGLp338 [Wigglesworthia glossinidia
           endosymbiont of Glossina brevipalpis]
 gi|25166294|dbj|BAC24484.1| tyrS [Wigglesworthia glossinidia endosymbiont of Glossina
           brevipalpis]
          Length = 496

 Score =  361 bits (928), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 138/422 (32%), Positives = 224/422 (53%), Gaps = 11/422 (2%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
              D +  L  R  I ++++   +  +  +  +  Y G+D TA SLH GHL  L+ L   
Sbjct: 70  IMKDLIQELKNRKLISKLTDEINIKKILKEKKINLYCGFDPTADSLHIGHLIPLLFLKRF 129

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
              GH PI ++GG T+++GD + +     + + + ++   + I+    + IKY     + 
Sbjct: 130 SNFGHIPIIVIGGATALLGDFNIKKNKSFLEKYKNVKNWSKTIENQILNIIKYENNNCNL 189

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
           ++LNN  W+  +K I+ LR+IG F S+N++L  E V+ +LK  Q +SF+EF+Y +LQ YD
Sbjct: 190 IILNNYLWIKELKIINFLRDIGRFISINKILRKEIVKKKLKENQHISFMEFSYSLLQGYD 249

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT--L 241
           +  L  NYD  +Q+GGSDQW NII GIDL  ++   K++ +T+PLLT ++G+K+GK+   
Sbjct: 250 YYFLNLNYDVYIQIGGSDQWSNIISGIDLVNKINKKKVYGITTPLLTRSNGSKLGKSDDK 309

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR-MAKLQGKEIN--EA 298
              IWL+K+ TS Y F+Q+W N  D  +  + K  T + MSEI++   K   KEIN  +A
Sbjct: 310 EKVIWLDKKKTSVYEFYQFWLNTPDEKIFRYLKLFTFISMSEINKLKCKFFNKEINPFQA 369

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI------SISKDEVSRGMGL 352
           +KI+A EIT +VHG  +   A  A    F   I    +          I          +
Sbjct: 370 QKILADEITKIVHGISQLRLAQKATNFLFYKKISELSIEDFYLLSTSGIKIYYPKSNENI 429

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
             ++V +  + S N A+  + S++I+INN    +     K +D        +  GKK+  
Sbjct: 430 KDILVNSKLSKSKNNAKSVILSSSIRINNKKQKSIDFMFKKEDKLFNLFTLIKKGKKDFC 489

Query: 413 IC 414
           + 
Sbjct: 490 LL 491


>gi|309791774|ref|ZP_07686262.1| tyrosyl-tRNA synthetase [Oscillochloris trichoides DG6]
 gi|308226180|gb|EFO79920.1| tyrosyl-tRNA synthetase [Oscillochloris trichoides DG6]
          Length = 395

 Score =  361 bits (928), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 97/410 (23%), Positives = 172/410 (41%), Gaps = 27/410 (6%)

Query: 9   LSILSERGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           ++ L  RG + ++    EL    + G  +    G+D T   +H GH   L  L   Q  G
Sbjct: 8   INELLTRG-VAEVIIEAELRQRLAAGQPLRLKQGFDPTKPDMHIGHAVGLRKLRKFQDAG 66

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+ + ++G  T+ IGDPS RDE+R  + +  ++ N E     F   +     +       
Sbjct: 67  HQVVLIVGDWTAQIGDPSGRDETRPRLDAATVRSNAETYMEQFFRVVDRERTEVRWQ--- 123

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
              W    K    L ++   F++ +MLS E+ R R +    L+ LE  Y +LQAYD V +
Sbjct: 124 -SEWYGDFKLEQAL-DLAGRFTLGQMLSHETFRRRYEEGAKLTILELMYPMLQAYDSVAI 181

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
             +    ++ GG+DQ  N + G +L  +L       L  PL+    G KMGKT +  + +
Sbjct: 182 QSD----VEFGGTDQKFNNLAGRELMSQLGMRPQHVLLVPLIPGTDGRKMGKTFNNTVDI 237

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSE---IDRMAKLQGKEINEAKKIIAT 304
                 P        ++ D  +  + + LT +P++E   I    +       + K  +A 
Sbjct: 238 T---LPPAEMLGKIMSMSDEVLPLYFEVLTDVPLAELAAIRAAMEAGTVNPRDLKMRLAR 294

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E+ +  H   +A  A  A +  F        +P  ++S         ++ L+V A  A S
Sbjct: 295 EVVSQFHSPADALAAEEAFVRQFVQRELPTDIPEYALS-----GPTAIIDLMVAAKLAAS 349

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
             EARR +    ++++   +    L +     D    + +  G++  +  
Sbjct: 350 KGEARRLIDGGGVRVDGERVEGYDLSL-----DPGAGVVVQVGRRKFVRV 394


>gi|312792884|ref|YP_004025807.1| tyrosyl-tRNA synthetase [Caldicellulosiruptor kristjanssonii
           177R1B]
 gi|312180024|gb|ADQ40194.1| tyrosyl-tRNA synthetase [Caldicellulosiruptor kristjanssonii
           177R1B]
          Length = 396

 Score =  361 bits (928), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 104/406 (25%), Positives = 186/406 (45%), Gaps = 28/406 (6%)

Query: 16  GFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMG 75
           G    I+    ++ L     +   +G D     +H GH   L  L  LQ  GH  I ++G
Sbjct: 13  GAAEIITEEELVEKLKQDRPLNIKLGLDPNVPDVHLGHAVVLRKLKQLQDLGHNIILIIG 72

Query: 76  GGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSI 135
             T++IGDP+ + E+R+ +  +E+Q+N E  K      +          +  N  WL  +
Sbjct: 73  DFTAMIGDPTGKSETRKQLTKEEVQKNAEPFKQQILKILD----PQKTTIRYNSEWLEPM 128

Query: 136 KYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRL 195
            ++D++  + S ++V RML  E+ R R+++   LS  EF Y ++Q YD V +    +  +
Sbjct: 129 NFLDVI-NLASKYTVARMLERETFRQRMEKNLPLSIHEFFYPLMQGYDSVVI----EADV 183

Query: 196 QMGGSDQWGNIICGIDLGERLKTPK-LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTS 253
           ++G ++Q  NI+ G  L +         AL  P+L    G  KM K+L   I +N+    
Sbjct: 184 ELGATEQKFNILMGRTLQKEYGCKTIQVALLMPILVGTDGVNKMSKSLGNYIGINE---P 240

Query: 254 PYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAKKIIATEITTMV 310
           P   +    +I D  ++S+ +  T L   EI+ + +   +      +AK  +A EI  + 
Sbjct: 241 PNVMYGKVMSIPDEIMISYYELTTDLEPEEIEEIKRKLEEGTLHPRDAKMRLAREIVKLY 300

Query: 311 HGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARR 370
           HG E A KA    ++ F       ++P + +   +V     L   +V+    +ST+E  R
Sbjct: 301 HGEEAALKAEEEFIKVFQKKDIPDNIPEVELQSSKV----YLPRFMVENKLCSSTSEGMR 356

Query: 371 HLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            +KS A+K+N   +++  ++++  D        L  GK   +   L
Sbjct: 357 LIKSGAVKLNGEKVNDLDIELQNGD-------VLQVGKLKFVKIKL 395


>gi|119180367|ref|XP_001241661.1| hypothetical protein CIMG_08824 [Coccidioides immitis RS]
          Length = 635

 Score =  361 bits (927), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 132/486 (27%), Positives = 207/486 (42%), Gaps = 74/486 (15%)

Query: 5   KSDFLSILSERGFIHQIS-NPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           K  FLS L ERG ++ +      LD L ++  V  Y G D TA SLH GH+   M+L W 
Sbjct: 79  KQSFLSFLEERGLVNSVVGQRDALDKLITRKRVGFYAGVDPTAPSLHIGHMLPFMILGWA 138

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSS----FIKYGTG 119
              G K + L+GG T+ IGDP+ R E R +M     + NI  I          F KYG  
Sbjct: 139 YVHGLKAVFLIGGSTAKIGDPTGRLEGRPLMDGATRRANIANIHLQLKRLGFSFEKYGRK 198

Query: 120 KTDAL-------MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFL 172
                       + NN TW       +++  +G+   +  ML  + V+SRL   + +S  
Sbjct: 199 HGFEWEWAWRRALENNNTWWNKQSLKEVMEVLGTSLRLGPMLGRDYVKSRLASGEGMSIA 258

Query: 173 EFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL---------------- 216
           EF Y I+Q +DF  L +    ++Q+GGSDQ+GNI+ G+D  + +                
Sbjct: 259 EFCYPIMQGWDFWYLFQRK-VQVQVGGSDQYGNILFGMDAIKGILKANPESEWAPKKDED 317

Query: 217 -KTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKR 275
                 + +T+PLLTTASG K+GK+   A+WL+K+MTS Y+ +QY+  + D+DV  + K 
Sbjct: 318 PDLANPYGITTPLLTTASGEKIGKSAGNAVWLDKDMTSCYDLYQYFVRVADSDVERYLKM 377

Query: 276 LTTLPMSEIDRMAKLQGKEI--NEAKKIIATEITTMVHGREEAEKAATAAMECF----DM 329
            T +P   I  + +   K+     A+  +A E   ++HG   AEKAA      F      
Sbjct: 378 FTFVPTPAIKELMEEHAKDPSKRVAQHKLAREFVELIHGSLSAEKAAKDHRTLFMTKASA 437

Query: 330 SIHSQHMPTISISKDEVSRGM------------------GLL------TLIVKAGFATST 365
                       ++ + + G                    L+       ++  AG  +S 
Sbjct: 438 GAPEGLAAETEHAETDNAEGKHQKLHAFETATPHIILPRSLVINQFFHKVLWSAGMVSSK 497

Query: 366 NEARRHLKSNAIKI-----------NNS---IISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           +E  R + +N + +           +      +      I  +       + L  GK N 
Sbjct: 498 SEGFRLIVNNGVHVASRSDSREVMGDGVSYIPVKTWPADITEKFVIDGRLLILRIGKWNL 557

Query: 412 IICHLC 417
            I  + 
Sbjct: 558 KIIKIV 563


>gi|297172518|gb|ADI23489.1| tyrosyl-tRNA synthetase [uncultured gamma proteobacterium
           HF0770_40P16]
          Length = 398

 Score =  361 bits (927), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 105/414 (25%), Positives = 174/414 (42%), Gaps = 22/414 (5%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
            D    L  RG    I     L+ L  +  +    G+D TA  LH GH   L  L   Q 
Sbjct: 2   KDIELDLLLRGVEEVIPKKDFLEQLKKRRPLRIKAGFDPTAPDLHLGHTVLLNKLKLFQD 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+ I L+G  T ++GDPS  +E+R ++  +EI +N E  K      +     +    +
Sbjct: 62  LGHQIIFLIGDFTGLVGDPSGVNETRPVLSEKEISKNSETYKKQVFKILDPKKTE----I 117

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
             N  W+ +    + ++ + S  +V RML  +    R K +Q +S  EF Y +LQ YD V
Sbjct: 118 RFNSEWMNNFSSEEFIK-LSSSQTVARMLERDDFEKRYKSQQPISIHEFLYPLLQGYDSV 176

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGA 244
            L  +    +++GG+DQ  N++ G ++ +         LT PLL    G  KM K+    
Sbjct: 177 VLKTD----IELGGTDQKFNLLLGREVQKFYGLSPQSVLTLPLLEGLDGEKKMSKSFGNY 232

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKII 302
           + +          +    +I D  +  + + L+     EI     ++ +G+     K I+
Sbjct: 233 LAIEDSRD---EMFGKLMSISDQLMWRYFQLLSFKTDKEIKNLEKSQKEGENPRNIKFIL 289

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFA 362
           A EI    HG  E  KA    +  F        +  I I   E  + + L  ++ +A   
Sbjct: 290 AEEIVDRFHGTGEGSKARNEFILRFQKGKLPSDIKEIFIKISE--QDISLPRVLKEARMV 347

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            ST+EA R +K  A+KI      + K ++ L        +    GK+  +   +
Sbjct: 348 PSTSEALRLIKQGAVKIEGKKTLDPKHKLSL-----NSCLLYQVGKRRFLKIKI 396


>gi|160878919|ref|YP_001557887.1| tyrosyl-tRNA synthetase [Clostridium phytofermentans ISDg]
 gi|160427585|gb|ABX41148.1| tyrosyl-tRNA synthetase [Clostridium phytofermentans ISDg]
          Length = 402

 Score =  361 bits (927), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 93/403 (23%), Positives = 180/403 (44%), Gaps = 27/403 (6%)

Query: 20  QISNPRELDILC-----SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLM 74
            +    EL             +T  +G D +A  +H GH   L  +  +Q  GH+ I ++
Sbjct: 17  DMMREEELREKLKVSVEQNNPLTIKLGLDPSAPDIHLGHTVVLRKIKQMQDLGHRAIIII 76

Query: 75  GGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCS 134
           G  T  IGDP+ + ++R+ +  ++++EN           +     +    +  N  WL  
Sbjct: 77  GDFTGRIGDPTGKSKTRKPLTDEQVKENAATYMEQIFKVLDREKTE----VRFNSEWLSK 132

Query: 135 IKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCR 194
           + +  ++  + S  +V R+L  +  ++R K ++++   EF Y ++Q YD VE+  +    
Sbjct: 133 LNFEQVI-SLASSMTVARLLERDDFQNRYKNQEAIGLHEFFYPLMQGYDSVEIKAD---- 187

Query: 195 LQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTS 253
           +++GG+DQ  NI+ G  L + +   +  A+  P+L    G  KM K+L   I +++   S
Sbjct: 188 IELGGTDQTFNILMGRTLQKSVGMSQQIAMFMPILEGLDGIEKMSKSLGNYIGVSE---S 244

Query: 254 PYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEITTMVH 311
           P   ++    + D  +  + + +T     +I+  R+   QGK   + K I+A  IT + H
Sbjct: 245 PQVMFKKVMEVPDQLIFRYFELVTDEHPDDIEKLRIEMEQGKNPRDIKLILARIITNLYH 304

Query: 312 GREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRH 371
           G E A+       + F      + MP I + K++ S    +  ++   G   S +E RR 
Sbjct: 305 GEEGAKAGEEYFEQVFKEGEIPEDMPVIKLEKEQDSL-ASVAGVLASEGLVPSASEFRRL 363

Query: 372 LKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +K   +++N   + +    +  Q+        L  GKK  +  
Sbjct: 364 IKQGGVQLNREKVLDIDCVLTEQEN------VLKIGKKKFVRL 400


>gi|300869063|ref|ZP_07113664.1| tyrosyl-tRNA synthetase [Oscillatoria sp. PCC 6506]
 gi|300332920|emb|CBN58860.1| tyrosyl-tRNA synthetase [Oscillatoria sp. PCC 6506]
          Length = 410

 Score =  361 bits (927), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 89/389 (22%), Positives = 176/389 (45%), Gaps = 22/389 (5%)

Query: 28  DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFR 87
            +  +   +   +G D T + +H GH   +  L   Q  GH  + ++G  T+ IGDP+ +
Sbjct: 40  RLATTDRPLRIKLGIDPTGADIHLGHSIPVRKLRAFQDAGHTAVLIIGDFTARIGDPTGK 99

Query: 88  DESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSF 147
            E+RR +  +++ +N +         + + T      +  N  WL  +    +L E+ + 
Sbjct: 100 SEARRQLTPEDVAQNAQTYIDQVRPILDFDTP-GRLEIRYNSEWLSKLDLTKIL-ELLAT 157

Query: 148 FSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNII 207
            +V +ML+ E   +RL++   +   EF Y ++Q YD V +    +  +++GG+DQ  N+ 
Sbjct: 158 MTVGQMLAKEGFDTRLEQGTPIYLHEFLYPLMQGYDSVAV----EADVELGGTDQKFNLA 213

Query: 208 CGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDD 266
            G DL    +    F + +P+L    G  KM K+L+  + L++    P   +Q  + + D
Sbjct: 214 VGRDLQRHFRIRPQFGMLTPILIGTDGIQKMSKSLNNYVGLSE---HPSLMYQKLQRVPD 270

Query: 267 ADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMEC 326
             +  + + LT LP++E+         +  + ++++A ++    +  E A +A   AM  
Sbjct: 271 NLLEQYFELLTDLPLNEL-------PPDPRQRQQLLAFDVVKQYYDEETAIQARQTAMTI 323

Query: 327 FDMS-IHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIIS 385
                  +  +P  S+   EV     L  ++  +G   S+NEARR ++ N +K++   +S
Sbjct: 324 GQGDTTQADAVPEFSV--GEVKFPAKLFYILSASGLCASSNEARRKIQENGVKLDGDRVS 381

Query: 386 NEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +  L  +           L  GK   +  
Sbjct: 382 DVNLAFESPADLQDK--VLQVGKNKFVRL 408


>gi|15611778|ref|NP_223429.1| tyrosyl-tRNA synthetase [Helicobacter pylori J99]
 gi|11135060|sp|Q9ZL69|SYY_HELPJ RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|4155267|gb|AAD06286.1| TYROSYL-TRNA SYNTHETASE [Helicobacter pylori J99]
          Length = 402

 Score =  361 bits (926), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 104/426 (24%), Positives = 194/426 (45%), Gaps = 35/426 (8%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLT 55
           M    S  L  +  RG  ++I     ++ L  +            G+D TA  LH GH  
Sbjct: 1   MEQKISVALKEIK-RGA-NEIIGLEYIEKLVRKYYETNERFIVKAGFDPTAPDLHLGHTV 58

Query: 56  QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK 115
            +  L  LQ+ G +   L+G  T++IGDP+ ++E+R+ +  +++ EN +  K      + 
Sbjct: 59  LIQKLALLQQYGARVKFLIGDFTAMIGDPTGKNETRKPLNREQVLENAKTYKEQIYKILD 118

Query: 116 YGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFN 175
               +    +  N  WL ++    ++ E+ + FSV RML  +    R K  + +S +EF 
Sbjct: 119 ----QKHTEVCFNSAWLDALGAKGMI-ELCAKFSVARMLERDDFAKRYKENRPISIVEFL 173

Query: 176 YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASG 234
           Y +LQ YD V +       +++GG+DQ  N++ G  L        +   +T PLL    G
Sbjct: 174 YPLLQGYDSVAM----GADIELGGNDQKFNLLVGRFLQRAYGLNKEQSIITMPLLEGLDG 229

Query: 235 -TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK---L 290
             KM K+L   + + +E   P   +    ++ D  +  +   L+   + EI+ +      
Sbjct: 230 VQKMSKSLGNYVGITEE---PNAMFGKIMSVSDDLMWRYYTLLSAKTLEEIEDLKHGILH 286

Query: 291 QGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGM 350
           Q       K+ +A+EI    +  ++A KA     + F  ++    +P I + + +   G+
Sbjct: 287 QTLHPKAVKEDLASEIVARYYDNDQAFKAKEQFSKVFSANL----LPEILL-ESDFDEGV 341

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
           G+L ++ + GF  ST++ARR ++   +KIN  ++ +E  +         GN  +  GKK 
Sbjct: 342 GVLDVLKQIGFCPSTSQARRDIQGGGVKINQEVVKDESYRFVK------GNYVIQLGKKR 395

Query: 411 HIICHL 416
            +  ++
Sbjct: 396 FMKLNI 401


>gi|78186451|ref|YP_374494.1| tyrosyl-tRNA synthetase [Chlorobium luteolum DSM 273]
 gi|115305813|sp|Q3B5D0|SYY_PELLD RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|78166353|gb|ABB23451.1| tyrosyl-tRNA synthetase [Chlorobium luteolum DSM 273]
          Length = 405

 Score =  361 bits (926), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 105/387 (27%), Positives = 173/387 (44%), Gaps = 25/387 (6%)

Query: 35  VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMM 94
            +   +G D +   LH GH   L  L   Q  GH+ I ++G  T++IGDPS + ++R  +
Sbjct: 39  PLKVKLGADPSRPDLHLGHSVVLRKLREFQDLGHEAILIIGDFTAMIGDPSGKSKTRPQL 98

Query: 95  RSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRML 154
            ++E +EN        S  +          +  N  WL ++ + D++R + S ++V RML
Sbjct: 99  SAEEARENGASYFEQASKILD----PHKTTICYNADWLGNMTFADVIR-LSSHYTVARML 153

Query: 155 SFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
             +    R +  + +S  EF Y + QA D V L  +    +++GG+DQ  N++ G DL  
Sbjct: 154 ERDDFERRYRSSEPISIHEFLYPLAQAMDSVHLRND----VELGGTDQKFNLLVGRDLQR 209

Query: 215 RLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFA 273
                    +T PLL    G  KM K+L  A+  N     P + +    +I D  + ++ 
Sbjct: 210 EYGILPQVCITMPLLVGTGGEDKMSKSLGNAVCFN---DLPSDMYGRVLSIPDTLIENWC 266

Query: 274 KRLTTLPMSEIDRMAKLQG--KEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSI 331
           + L  LP++   R A L+G  ++   AK+ +A EI    +   EA  A       F    
Sbjct: 267 RLL--LPLTGEGRRAILEGWEEDPRTAKRRLAREIVMQYYSAGEAGAAEEHFDRLFVHKQ 324

Query: 332 HSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
               +     S+ E+     L+ L+   G A S  +ARR ++ NA+ I+   I++ K  I
Sbjct: 325 APTEIELTRFSEPEL----PLVDLLTTLGAAASKTDARRMIQQNAVSIDEEKITDVKTII 380

Query: 392 KLQDFDSTGNIKLSFGKKNHIICHLCG 418
            L D   T    L  GK+        G
Sbjct: 381 TLSDEPKT----LKAGKRKFFRIATAG 403


>gi|217033733|ref|ZP_03439159.1| hypothetical protein HP9810_7g14 [Helicobacter pylori 98-10]
 gi|216943782|gb|EEC23222.1| hypothetical protein HP9810_7g14 [Helicobacter pylori 98-10]
          Length = 402

 Score =  361 bits (926), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 106/417 (25%), Positives = 194/417 (46%), Gaps = 36/417 (8%)

Query: 12  LSE--RGFIHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           L E  RG  ++I     ++ L  +            G+D TA  LH GH   +  L  LQ
Sbjct: 9   LKEIARGA-NEIIGLEYIEKLVRKYYETNERFIVKAGFDPTAPDLHLGHTVLIQKLALLQ 67

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + G +   L+G  T++IGDP+ ++E+R+ +  +++ EN +  +      +     +    
Sbjct: 68  QYGARVKFLIGDFTAMIGDPTGKNETRKPLNREQVLENAKTYEEQIYKILD----QKHTE 123

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           +  N TWL ++    ++ E+ + FSV RML  +    R K  + +S +EF Y +LQ YD 
Sbjct: 124 VCFNSTWLDTLGTKGII-ELCAKFSVARMLERDDFTKRYKENRPISIVEFLYPLLQGYDS 182

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASG-TKMGKTLS 242
           V +  +    +++GG+DQ  N++ G  L        +   +T PLL    G  KM K+L 
Sbjct: 183 VAMDAD----IELGGNDQKFNLLVGRFLQRAYGLNKEQSIITMPLLEGLDGVQKMSKSLG 238

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK---LQGKEINEAK 299
             + + +E   P   +    ++ D  +  +   L+T  + EI+ +      Q       K
Sbjct: 239 NYVGITEE---PNAMFGKIMSVSDDLMWRYYTLLSTKTLEEIEDLKHGILNQTLHPKAVK 295

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKA 359
           + +A EI    +  E+A KA     + F  ++    +P I + + +   G+G+L ++ + 
Sbjct: 296 EDLAGEIVARYYDDEQAIKAKEQFSKVFSANL----LPEILL-ESDFDEGVGILDVLKQI 350

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           GF  ST++ARR ++   +KIN  ++ NE  +         GN  +  GKK  +  ++
Sbjct: 351 GFCPSTSQARRDIQGGGVKINQEVVKNESYRFVK------GNYVIQLGKKRFMKLNI 401


>gi|156060931|ref|XP_001596388.1| hypothetical protein SS1G_02608 [Sclerotinia sclerotiorum 1980]
 gi|154700012|gb|EDN99750.1| hypothetical protein SS1G_02608 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 698

 Score =  361 bits (926), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 130/479 (27%), Positives = 222/479 (46%), Gaps = 70/479 (14%)

Query: 9   LSILSERGFIHQIS-NPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           LSIL ERG++HQI+ +  E+D + ++  + AY+G D TA SLH GHL  LM LFW+   G
Sbjct: 68  LSILEERGYVHQITGSRDEVDRMMTEKRLGAYVGVDPTAPSLHIGHLLPLMSLFWMYVHG 127

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFI--------KYGTG 119
           +  +SL+GG T+ IGDP+ R  +R  M+S    ENI K+                K+G  
Sbjct: 128 YHTVSLVGGATAKIGDPTDRLTTREKMKSTTRNENILKMHYQMKGIWLNVEAYGRKHGYK 187

Query: 120 KTDAL---MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNY 176
              A    ++NN  W+  +  ++LL+ +G    +  M++ ++V++++ +   +S+ EF Y
Sbjct: 188 WEWAWKRGLVNNNAWMNGLTVMELLQVLGPGMRMGAMIAKDTVKNKMNKGDGMSYAEFTY 247

Query: 177 MILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL--------------KTPKLF 222
            +LQ++D+  +       +Q+GGSDQ+GNI  G+D  + +              K    F
Sbjct: 248 PLLQSWDWWHMYNTKGITMQIGGSDQYGNITAGVDAVKYILANHPDPTIKEQHEKATPPF 307

Query: 223 ALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMS 282
             T PLLTT+SG K GK+   A+WL+K+M S ++ + ++    D DV  + K  T +P+ 
Sbjct: 308 GFTVPLLTTSSGAKFGKSAGNALWLDKDMMSSFDLYGHFLRTSDQDVEKYLKLFTFMPVE 367

Query: 283 EIDRMAKLQGKEI--NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM---- 336
           EI ++ +   K     +A+  +A +   +VHG  EA+ A       F  S +++++    
Sbjct: 368 EITKLMEEHMKAPSQRQAQHKLARDFLELVHGEPEAKAAELQHRLLFSKSNNAENLEKLQ 427

Query: 337 ----------------------PTISISKDE-VSRGMGLLTLIVKAGFATSTNEARRHLK 373
                                 P+  +           +  ++V AG   + +EA R   
Sbjct: 428 NDLKLAEHKLASHPQGTNASNRPSADLKLPRSFVMSRSIPRIVVAAGLCDTNSEANRLCG 487

Query: 374 SNAIKINNS-----IISNEKLQIKL------QD----FDSTGNIKLSFGKKNHIICHLC 417
           +  + I  S        ++ L          +D          + L  GK N  I  + 
Sbjct: 488 AAGLYIGGSRPLGYKGKDDALVFTPIKRWQNEDTHHYLIDGSMLVLRRGKSNIRIIKIV 546


>gi|157164866|ref|YP_001467339.1| tyrosyl-tRNA synthetase [Campylobacter concisus 13826]
 gi|112801848|gb|EAT99192.1| tyrosyl-tRNA synthetase [Campylobacter concisus 13826]
          Length = 402

 Score =  361 bits (926), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 104/422 (24%), Positives = 181/422 (42%), Gaps = 36/422 (8%)

Query: 7   DFLSILSE--RGFIHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLML 59
           D   IL E  RG + ++ +   ++ L               G+D TA  LH GH   L  
Sbjct: 4   DIDDILQEINRG-VAEMIDAERVENLVKNYYEKGENFYVKAGFDPTAPDLHLGHTVVLNK 62

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG 119
           +  LQK G     L+G  T+ IGDP+ +  +R+ +  + + +N +  +      +     
Sbjct: 63  MALLQKHGAIVQFLIGDFTAQIGDPTGKSATRKKLDQETVLKNAKTYEEQVFKILD---- 118

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
               +++ N  W   +    ++ E+ S FSV RML  +    R+K    +S  EF Y +L
Sbjct: 119 PKKTVIMFNSKWSNELGAAGMI-ELTSTFSVARMLERDDFEKRIKAGNPISISEFMYPLL 177

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASGT-KM 237
           Q YD V +     C ++MGG+DQ  N++ G  L        +   +  PLL    G  KM
Sbjct: 178 QGYDSVAMK----CDIEMGGTDQKFNLLMGRTLQRTYNIGKEQAVIMMPLLEGLDGVNKM 233

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---E 294
            K+L   I + +      + +    +I D  +  + + L+T  + EI+ +          
Sbjct: 234 SKSLGNYIGVTENAN---DMFAKTLSISDELMWRWYELLSTKTLGEIEELMNDVNSGKYH 290

Query: 295 INEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLT 354
             +AK+ +A EIT   HG E A+ A          +     M   S+        + ++ 
Sbjct: 291 PKKAKEDLAYEITARYHGEEAAKAAMAEFNSVHSQNQLPTDMKEFSLKA-----PIWIVE 345

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            + + G + S ++ARR +K+NA+ +N   IS+E+L++        G   L  GK+     
Sbjct: 346 ALSQCGLSESNSQARRDIKANAVSVNQEKISDEQLKL------GAGEYILQVGKRKFAKI 399

Query: 415 HL 416
            +
Sbjct: 400 KV 401


>gi|219847373|ref|YP_002461806.1| tyrosyl-tRNA synthetase [Chloroflexus aggregans DSM 9485]
 gi|219541632|gb|ACL23370.1| tyrosyl-tRNA synthetase [Chloroflexus aggregans DSM 9485]
          Length = 390

 Score =  361 bits (926), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 99/410 (24%), Positives = 173/410 (42%), Gaps = 27/410 (6%)

Query: 9   LSILSERGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           LS L  RG + ++    EL      G  +    G+D T   +H GH   L  L   Q+ G
Sbjct: 3   LSELLSRG-VAEVIVESELRARLQSGTPLRLKQGFDPTKPDMHIGHAVGLRKLRAFQELG 61

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+ + ++G  T+ IGDPS RDE+R  + + E++ N E     F   +     +       
Sbjct: 62  HQVVLIVGDWTAQIGDPSGRDETRARLSAAEVRANAETYMEQFFRVVDRQRTEVRWQ--- 118

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
              W       + L ++   F++ +ML+ E+ R R +    L+ LE  Y +LQAYD V +
Sbjct: 119 -SEWFGQFTLENAL-DLAGRFTLAQMLAHETFRKRYETGAPLTILELMYPMLQAYDSVAI 176

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
             +    ++ GG+DQ  NI+ G +L  +L          PL+    G KM KT +  + +
Sbjct: 177 RAD----VEFGGTDQKFNILAGRELMAQLGMTPQQVFLVPLIPGTDGRKMSKTFNNTVDI 232

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAKKIIAT 304
                 P   +    ++ D  +  + + LT +PM+EI  M            + K  +A 
Sbjct: 233 ---RMPPTEMYGRIMSMSDEVLPLYFEVLTDVPMAEIAEMKTAMATGQVNPRDLKMRLAR 289

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           EI    H    A  A    +  F      + +P  ++         G++ ++V +G A S
Sbjct: 290 EIVAQFHDPAAAAAAEATFIRQFVERELPEDIPNFTL-----EAPTGIVDVLVASGLAPS 344

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +EARR +    ++++   +    L I         N+ +  G++  +  
Sbjct: 345 KSEARRLIDGGGVRVDGERVEGYTLTINP-----GANVVVQVGRRKFVRV 389


>gi|257063568|ref|YP_003143240.1| tyrosyl-tRNA synthetase [Slackia heliotrinireducens DSM 20476]
 gi|256791221|gb|ACV21891.1| tyrosyl-tRNA synthetase [Slackia heliotrinireducens DSM 20476]
          Length = 405

 Score =  360 bits (925), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 96/401 (23%), Positives = 168/401 (41%), Gaps = 21/401 (5%)

Query: 18  IHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGG 76
           I  +     L     +G  +   +G D TA  +H GH   L  L   Q  GH+   ++G 
Sbjct: 17  IDAVIPEDALLEKLKRGKPLNIKLGVDPTAPDIHLGHAVPLRKLRQFQDLGHRVTLIIGD 76

Query: 77  GTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIK 136
           GT++IGDPS R+ +R  +  +++  N +         +     +      +N  W+  + 
Sbjct: 77  GTALIGDPSGRNSTRPQLTKEQVAANAQTYVDQAFKILDPEKTELK----HNADWILDLD 132

Query: 137 YIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQ 196
              LL  + S F+V R+L  +    R      ++  EF Y ++QAYD V +  +    ++
Sbjct: 133 MAKLLSLL-SNFTVARILERDDFHKRYTGGLPIALHEFLYPVMQAYDSVVINAD----VE 187

Query: 197 MGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPY 255
           +GGSDQ  N++ G +L E+L      ALT PLL    G  KM K+    I L  E   P 
Sbjct: 188 IGGSDQLFNLLAGRELMEKLGMEPQVALTLPLLEGTDGVRKMSKSYGNYIGLTDE---PN 244

Query: 256 NFWQYWRNIDDADVVSFAKRLTTLP---MSEIDRMAKLQGKEINEAKKIIATEITTMVHG 312
           + +    +I D  ++ + +  +T+    + EI+          N+ K+ +A  I    + 
Sbjct: 245 DMFGKIMSIPDELMIKYYRLASTVEVAQIDEIEAGLANDELHPNKVKRALARNIVEAYYD 304

Query: 313 REEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTNEARRH 371
              A+ A +     F      +  P +         G +    +IV+A  A S +EARR 
Sbjct: 305 EAAAQAAESDFDLKFKEHGFPEDAPVVEADLTPGEDGTVYFAKIIVEAKAAQSVSEARRL 364

Query: 372 LKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           +    +K+N + +  +   +  +         +  GKK   
Sbjct: 365 IDGGGVKVNGTALPAKSYYVTPETVAHAQ---VQVGKKKFF 402


>gi|160871601|ref|ZP_02061733.1| tyrosyl-tRNA synthetase [Rickettsiella grylli]
 gi|159120400|gb|EDP45738.1| tyrosyl-tRNA synthetase [Rickettsiella grylli]
          Length = 401

 Score =  360 bits (925), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 107/411 (26%), Positives = 185/411 (45%), Gaps = 24/411 (5%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            + +RG    +        L     +    G+D TA  LH GH   +  L  LQ  GH+ 
Sbjct: 7   EIFQRGSTELLVIDELKSKLKENRPLRIKAGFDPTAPDLHLGHTVLINKLRQLQDLGHEI 66

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
             ++G  T++IGDPS ++ +R  +   ++  N +  +  F   +          +  N T
Sbjct: 67  DIIIGDFTALIGDPSGKNVTRPPLSVDKVVANTKTYQQQFDKILD----PKKTNLRFNST 122

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           WL  +   DL++ + S ++V RML  +    R  + +S++  EF Y +LQAYD V L  +
Sbjct: 123 WLGKLSVTDLIK-LASSYTVARMLERDDFHQRYHQHRSIAIHEFLYPLLQAYDSVVLKTD 181

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNK 249
               L+ GG+DQ  N++ G +  +  K      LT P+L    G  KM K+L+  I +++
Sbjct: 182 ----LECGGNDQKFNLLLGREFQKHFKQTPQIILTLPVLEGLDGVQKMSKSLNNYIAIDE 237

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTT-LPMSEIDRMAK--LQGK-EINEAKKIIATE 305
              +    +    +I D  +  + + L+    +++I +M +  L+GK    + K  +A E
Sbjct: 238 SANT---MFGKIMSISDELMWRYFELLSFKKTLNDIKKMQQDALEGKANPRDFKIELALE 294

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           I    H   EAEKA       F        + T+ IS       + +  L+ +AG  +ST
Sbjct: 295 IIERFHTPSEAEKALKEFQHQFREGAIPSEIKTLCISIS--GENLPIAHLLKRAGLVSST 352

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +EA R + + A+KI++  I ++KL IK              GK+      +
Sbjct: 353 SEAFRFIDAGAVKIDSIKIDDKKLSIKT-----DTTHVYQVGKRRFAKVTI 398


>gi|93007093|ref|YP_581530.1| tyrosyl-tRNA synthetase [Psychrobacter cryohalolentis K5]
 gi|92394771|gb|ABE76046.1| tyrosyl-tRNA synthetase [Psychrobacter cryohalolentis K5]
          Length = 403

 Score =  360 bits (925), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 90/409 (22%), Positives = 178/409 (43%), Gaps = 22/409 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           + +RG    +S    +  L     +    G+D TA  LH GH   +  L   Q  GH+  
Sbjct: 14  IIQRGTQEILSEDDLVKKLKLNRPLRIKAGFDPTAPDLHLGHTVLINKLKHFQDLGHEIY 73

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T+ IGDPS ++ +R  +  ++I+ N +         +     K    ++ N  W
Sbjct: 74  FLIGDYTAKIGDPSGKNSTRPPLTDEQIKVNAQTYAEQVFKILD----KEKTRIVFNSEW 129

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
              +   D++ ++ S  +V+RML  +    R   +  ++  EF Y ++Q YD + L  + 
Sbjct: 130 FKDMSAGDMI-QLSSQLTVSRMLERDDFSKRYAAQTPIAIHEFLYPLVQGYDSIALKAD- 187

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKE 250
              +++GG+DQ  NI+ G  L  R        +T P+L    G  KM K+L   + +   
Sbjct: 188 ---VELGGTDQTFNILMGRTLQGRYGQEPQVCITVPILEGLDGVNKMSKSLGNYVGI--- 241

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATEITT 308
             +P   +Q   ++ D  +  + + L+  PM E++ +      G+   E K+I+A E+  
Sbjct: 242 YDAPGTMYQKLLSMPDTLIRRYFEFLSFKPMEEVEALMAEMENGRNPQEIKRILAEELIE 301

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
             H  + A  A  +A            +P +++   E    + +  ++ +A  A +++ A
Sbjct: 302 RFHDADAAANAHKSAGNVLADGELPVDLPEVTLDL-EGQDALFITQILNQAELAKNSSSA 360

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           +  +K  A+K++  ++ +    +      S   + +  GKK +    + 
Sbjct: 361 KDMIKRGAVKVDGEVV-DAGFSLT-----SGQTVVIQAGKKAYAKVTVA 403


>gi|300856593|ref|YP_003781577.1| tyrosyl-tRNA synthetase [Clostridium ljungdahlii DSM 13528]
 gi|300436708|gb|ADK16475.1| tyrosyl-tRNA synthetase [Clostridium ljungdahlii DSM 13528]
          Length = 407

 Score =  360 bits (925), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 97/409 (23%), Positives = 180/409 (44%), Gaps = 29/409 (7%)

Query: 18  IHQISNPRELDILCSQG-----VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPIS 72
           + Q+ + + L     +       +   +G D +A  +H GH   L  +  +Q  GH+ + 
Sbjct: 15  VSQVVSEKNLKRKLEKSVSSGIPLRIKLGLDPSAPDIHLGHAVVLRKIKQMQDLGHQAVI 74

Query: 73  LMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL 132
           ++G  T  IGDPS + ++RR + ++++ EN    +      +     +    +  N  WL
Sbjct: 75  IIGDFTGKIGDPSGKSKTRRQLTTEQVIENARTYEKQVFKILDRDKTE----VRFNSEWL 130

Query: 133 CSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYD 192
             + + D+L+  G   +V R+L  +    R K  + +   EF Y ++QAYD V +  +  
Sbjct: 131 SKLNFEDVLKLAGK-VTVARILERDDFEKRYKNNKPIGLHEFFYPLMQAYDSVAVKAD-- 187

Query: 193 CRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEM 251
             ++MGG+DQ  N++ G  L          AL  PLL    G  KM K+L   I + ++ 
Sbjct: 188 --IEMGGTDQTFNVLMGRTLQGDYSQESQIALFMPLLEGTDGVEKMSKSLGNYIGICEDA 245

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKIIATEITT 308
               + +Q    I D  ++ + +  T +   E++ +            + K  +A EITT
Sbjct: 246 ---ISIYQKIMTIPDNLIIKYFELATDIHPDEVEAIKLKLNNTETNPRDIKMQLAKEITT 302

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV--SRGMGLLTLIVKAGFATSTN 366
           +  G  EAE A       F  ++    +    +S+D    +  + L+ +I  +G A S +
Sbjct: 303 LYCGVSEAESAEEHFKTVFQKNLIPNDIDEFILSQDCFASNDEVNLVKIITGSGIAASNS 362

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           EA+R +  NA++IN    +N  +Q      +S  +  +  GK   +   
Sbjct: 363 EAKRLIDQNAVRINGKKYNNFLMQ------NSGNSFVIQVGKSKFVKVR 405


>gi|261839409|gb|ACX99174.1| tyrosyl-tRNA synthetase [Helicobacter pylori 52]
          Length = 402

 Score =  360 bits (925), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 105/417 (25%), Positives = 193/417 (46%), Gaps = 36/417 (8%)

Query: 12  LSE--RGFIHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           L E  RG  ++I     ++ L  +            G+D TA  LH GH   +  L  LQ
Sbjct: 9   LKEIARGA-NEIIGLEYIEKLVRKYYETNERFIVKAGFDPTAPDLHLGHTVLIQKLALLQ 67

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + G +   L+G  T++IGDP+ ++E+R+ +  +++ EN +  +      +     +    
Sbjct: 68  QYGARVKFLIGDFTAMIGDPTGKNETRKPLNREQVLENAKTYEEQIYKILD----QKHTE 123

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           +  N TWL ++    ++ E+ + FSV RML  +    R K  + +S +EF Y +LQ YD 
Sbjct: 124 VCFNSTWLDALGAKGII-ELCAKFSVARMLERDDFTKRYKENRPISIVEFLYPLLQGYDS 182

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASG-TKMGKTLS 242
           V +  +    +++GG+DQ  N++ G  L        +   +T PLL    G  KM K+L 
Sbjct: 183 VAMDAD----IELGGNDQKFNLLVGRFLQRSYGLNKEQSVITMPLLEGLDGVQKMSKSLG 238

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK---LQGKEINEAK 299
             + + +E   P   +    ++ D  +  +   L+   + EI+ +      Q       K
Sbjct: 239 NYVGITEE---PNAMFGKIMSVSDDLMWRYYTLLSAKTLEEIEDLKHGILNQTLHPKAVK 295

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKA 359
           + +A EI    +  E+A KA     + F  ++    +P I + + +   G+G+L ++ + 
Sbjct: 296 EDLAGEIVARYYDDEQAIKAKEQFSKVFSANL----LPEILL-ESDFDEGVGILDVLKQI 350

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           GF  ST++ARR ++   +KIN  ++ NE  +         GN  +  GKK  +  ++
Sbjct: 351 GFCPSTSQARRDIQGGGVKINQEVVKNESYRFVK------GNYVIQLGKKRFMKLNI 401


>gi|261837994|gb|ACX97760.1| tyrosyl-tRNA synthetase [Helicobacter pylori 51]
          Length = 402

 Score =  360 bits (925), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 105/417 (25%), Positives = 193/417 (46%), Gaps = 36/417 (8%)

Query: 12  LSE--RGFIHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           L E  RG  ++I     ++ L  +            G+D TA  LH GH   +  L  LQ
Sbjct: 9   LKEIARGA-NEIIGLEYIEKLVRKYYETNERFIVKAGFDPTAPDLHLGHTVLIQKLALLQ 67

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + G +   L+G  T++IGDP+ ++E+R+ +  +++ EN +  +      +     +    
Sbjct: 68  QYGARVKFLIGDFTAMIGDPTGKNETRKPLNREQVLENAKTYEEQIYKILD----QKHTE 123

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           +  N TWL ++    ++ E+ + FSV RML  +    R K  + +S +EF Y +LQ YD 
Sbjct: 124 VCFNSTWLDALGAKGII-ELCAKFSVARMLERDDFTKRYKENRPISIVEFLYPLLQGYDS 182

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASG-TKMGKTLS 242
           V +  +    +++GG+DQ  N++ G  L        +   +T PLL    G  KM K+L 
Sbjct: 183 VAMDAD----IELGGNDQKFNLLVGRFLQRAYGLNKEQSIITMPLLEGLDGVQKMSKSLG 238

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK---LQGKEINEAK 299
             + + +E   P   +    ++ D  +  +   L+   + EI+ +      Q       K
Sbjct: 239 NYVGITEE---PNAMFGKIMSVSDELMWRYYTLLSAKTLEEIEDLKHGILNQTLHPKAVK 295

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKA 359
           + +A EI    +  E+A KA     + F  ++    +P I + + +   G+G+L ++ + 
Sbjct: 296 EDLAGEIVARYYDDEQAIKAKEQFSKVFSANL----LPEILL-ESDFDEGVGILDVLKQI 350

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           GF  ST++ARR ++   +KIN  ++ NE  +         GN  +  GKK  +  ++
Sbjct: 351 GFCPSTSQARRDIQGGGVKINQEVVKNESYRFVK------GNYVIQLGKKRFMKLNI 401


>gi|308063440|gb|ADO05327.1| tyrosyl-tRNA synthetase [Helicobacter pylori Sat464]
          Length = 402

 Score =  360 bits (924), Expect = 3e-97,   Method: Composition-based stats.
 Identities = 105/417 (25%), Positives = 193/417 (46%), Gaps = 36/417 (8%)

Query: 12  LSE--RGFIHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           L E  RG  ++I     ++ L  +            G+D TA  LH GH   +  L  LQ
Sbjct: 9   LKEIARGA-NEIIGLEYIEKLVRKYYETNERFIVKAGFDPTAPDLHLGHTVLIQKLALLQ 67

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + G +   L+G  T++IGDP+ ++E+R+ +  +++ EN +  +      +     +    
Sbjct: 68  QYGARVKFLIGDFTAMIGDPTGKNETRKPLNREQVLENAKTYEEQIYKILD----QKHTE 123

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           +  N TWL ++    ++ E+ + FSV RML  +    R K  + +S +EF Y +LQ YD 
Sbjct: 124 VCFNSTWLDALGAKGII-ELCAKFSVARMLERDDFTKRYKENRPISIVEFLYPLLQGYDS 182

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASG-TKMGKTLS 242
           V +  +    +++GG+DQ  N++ G  L        +   +T PLL    G  KM K+L 
Sbjct: 183 VAMDAD----IELGGNDQKFNLLVGRFLQRAYGLNKEQSVITMPLLEGLDGVQKMSKSLG 238

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK---LQGKEINEAK 299
             + + +E   P   +    ++ D  +  +   L+   + EI+ +      Q       K
Sbjct: 239 NYVGITEE---PNAMFGKIMSVSDDLMWRYYTLLSAKTLEEIEDLKHGILNQTLHPKAVK 295

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKA 359
           + +A EI    +  E+A KA     + F  ++    +P I + + +   G+G+L ++ + 
Sbjct: 296 EDLAGEIVARYYDNEQAIKAKEQFSKVFGANL----LPEILL-ESDFDEGVGILDVLKQI 350

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           GF  ST++ARR ++   +KIN  ++ NE  +         GN  +  GKK  +  ++
Sbjct: 351 GFCPSTSQARRDIQGGGVKINQEVVKNENYRFVK------GNYVIQLGKKRFMKLNI 401


>gi|315586560|gb|ADU40941.1| tyrosine--tRNA ligase [Helicobacter pylori 35A]
          Length = 402

 Score =  360 bits (924), Expect = 3e-97,   Method: Composition-based stats.
 Identities = 105/417 (25%), Positives = 193/417 (46%), Gaps = 36/417 (8%)

Query: 12  LSE--RGFIHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           L E  RG  ++I     ++ L  +            G+D TA  LH GH   +  L  LQ
Sbjct: 9   LKEIARGA-NEIIGLEYIEKLVRKYYETNERFIVKAGFDPTAPDLHLGHTVLIQKLALLQ 67

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + G +   L+G  T++IGDP+ ++E+R+ +  +++ EN +  +      +     +    
Sbjct: 68  QYGARVKFLIGDFTAMIGDPTGKNETRKPLNREQVLENAKTYEEQIYKILD----QKHTE 123

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           +  N TWL ++    ++ E+ + FSV RML  +    R K  + +S +EF Y +LQ YD 
Sbjct: 124 VCFNSTWLDTLGAKGII-ELCAKFSVARMLERDDFTKRYKENRPISIVEFLYPLLQGYDS 182

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASG-TKMGKTLS 242
           V +  +    +++GG+DQ  N++ G  L        +   +T PLL    G  KM K+L 
Sbjct: 183 VAMDAD----IELGGNDQKFNLLVGRFLQRAYGLNKEQSIITMPLLEGLDGVQKMSKSLG 238

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK---LQGKEINEAK 299
             + + +E   P   +    ++ D  +  +   L+   + EI+ +      Q       K
Sbjct: 239 NYVGITEE---PNAMFGKIMSVSDDLMWRYYTLLSAKTLEEIEDLKHGILNQTLHPKAVK 295

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKA 359
           + +A EI    +  E+A KA     + F  ++    +P I + + +   G+G+L ++ + 
Sbjct: 296 EDLAGEIVARYYDDEQAIKAKEQFSKVFSANL----LPEILL-ESDFDEGVGILDVLKQI 350

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           GF  ST++ARR ++   +KIN  ++ NE  +         GN  +  GKK  +  ++
Sbjct: 351 GFCPSTSQARRDIQGGGVKINQEVVKNESYRFVK------GNYVIQLGKKRFMKLNI 401


>gi|332673421|gb|AEE70238.1| tyrosine--tRNA ligase [Helicobacter pylori 83]
          Length = 402

 Score =  360 bits (924), Expect = 3e-97,   Method: Composition-based stats.
 Identities = 99/390 (25%), Positives = 184/390 (47%), Gaps = 28/390 (7%)

Query: 32  SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESR 91
           +        G+D TA  LH GH   +  L  LQ+ G +   L+G  T++IGDP+ ++E+R
Sbjct: 35  TNERFIVKAGFDPTAPDLHLGHTVLIQKLALLQQYGARVKFLIGDFTAMIGDPTGKNETR 94

Query: 92  RMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVN 151
           + +  +++ EN +  +      +     +    +  N TWL ++    ++ E+ + FSV 
Sbjct: 95  KPLNREQVLENAKTYEEQIYKILD----EKHTEVCFNSTWLDTLGAKGMI-ELCAKFSVA 149

Query: 152 RMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGID 211
           RML  +    R K  + +S +EF Y +LQ YD V +  +    +++GG+DQ  N++ G  
Sbjct: 150 RMLERDDFAKRYKENRPISIVEFLYPLLQGYDSVAMDAD----IELGGNDQKFNLLVGRF 205

Query: 212 LGERLK-TPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADV 269
           L        +   +T PLL    G  KM K+L   + + +E   P   +    ++ D  +
Sbjct: 206 LQRAYGLNKEQSVITMPLLEGLDGVQKMSKSLGNYVGITEE---PNAMFGKIMSVSDDLM 262

Query: 270 VSFAKRLTTLPMSEIDRMAK---LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMEC 326
             +   L+   + EI+ +      Q       K+ +A EI    +  E+A KA     + 
Sbjct: 263 WRYYTLLSAKTLEEIEDLKHGILNQTLHPKAVKEDLAGEIVARYYDDEQAIKAKEQFSKV 322

Query: 327 FDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISN 386
           F  ++    +P I + + +   G+G+L ++ + GF +ST++ARR ++   +KIN  ++ N
Sbjct: 323 FGANL----LPEILL-ESDFDEGVGILDVLKQIGFCSSTSQARRDIQGGGVKINQEVVKN 377

Query: 387 EKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           E  +         GN  +  GKK  +  ++
Sbjct: 378 ESYRFVK------GNYVIQLGKKRFMKLNI 401


>gi|222528887|ref|YP_002572769.1| tyrosyl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725]
 gi|222455734|gb|ACM59996.1| tyrosyl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725]
          Length = 396

 Score =  360 bits (924), Expect = 3e-97,   Method: Composition-based stats.
 Identities = 104/406 (25%), Positives = 185/406 (45%), Gaps = 28/406 (6%)

Query: 16  GFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMG 75
           G    I+    ++ L     +   +G D     +H GH   L  L  LQ  GH  I ++G
Sbjct: 13  GAAEIITEEELVEKLKQDRPLNIKLGLDPNVPDVHLGHAVVLRKLKQLQDLGHNIILIIG 72

Query: 76  GGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSI 135
             T++IGDP+ + E+R+ +  +E+Q+N E  K      +          +  N  WL  +
Sbjct: 73  DFTAMIGDPTGKSETRKQLTKEEVQKNAEPFKQQVLKILD----PQKTTIRYNSEWLEPM 128

Query: 136 KYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRL 195
            ++D++  + S ++V RML  E+ R R+++   LS  EF Y ++Q YD V +    +  +
Sbjct: 129 NFLDVI-NLASKYTVARMLERETFRQRMEKNLPLSIHEFFYPLMQGYDSVVI----EADV 183

Query: 196 QMGGSDQWGNIICGIDLGERLKTPK-LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTS 253
           ++G ++Q  NI+ G  L +         AL  P+L    G  KM K+L   I +N+    
Sbjct: 184 ELGATEQKFNILMGRTLQKEYGCKTIQVALLMPILVGTDGVNKMSKSLGNYIGINE---P 240

Query: 254 PYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAKKIIATEITTMV 310
           P   +    +I D  ++S+ +  T L   EI+ + +   +      +AK  +A EI  + 
Sbjct: 241 PNVMYGKVMSIPDEIMISYYELTTDLEPEEIEEIKRKLEEGTLHPRDAKMRLAREIVKLY 300

Query: 311 HGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARR 370
           HG E A+KA    +  F        +P + ++  +V     L   +V+    +ST+E  R
Sbjct: 301 HGEEAAKKAEEEFIRVFQKKDVPDDIPEVELANAKV----YLPRFMVENKLCSSTSEGMR 356

Query: 371 HLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            +KS A+K+N   ++   ++++  D        L  GK   +   L
Sbjct: 357 LIKSGAVKLNGEKVNELDIELQNGD-------VLQVGKLKFVKVKL 395


>gi|317182086|dbj|BAJ59870.1| tyrosyl-tRNA synthetase [Helicobacter pylori F57]
          Length = 402

 Score =  360 bits (924), Expect = 3e-97,   Method: Composition-based stats.
 Identities = 105/417 (25%), Positives = 193/417 (46%), Gaps = 36/417 (8%)

Query: 12  LSE--RGFIHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           L E  RG  ++I     ++ L  +            G+D TA  LH GH   +  L  LQ
Sbjct: 9   LKEIARGA-NEIIGLEYIEKLVRKYYETNERFIVKAGFDPTAPDLHLGHTVLIQKLALLQ 67

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + G +   L+G  T++IGDP+ ++E+R+ +  +++ EN +  +      +     +    
Sbjct: 68  QYGARVKFLIGDFTAMIGDPTGKNETRKPLNREQVLENAKTYEEQIYKILD----QKHTE 123

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           +  N TWL ++    ++ E+ + FSV RML  +    R K  + +S +EF Y +LQ YD 
Sbjct: 124 VCFNSTWLDALGAKGII-ELCAKFSVARMLERDDFTKRYKENRPISIVEFLYPLLQGYDS 182

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASG-TKMGKTLS 242
           V +  +    +++GG+DQ  N++ G  L        +   +T PLL    G  KM K+L 
Sbjct: 183 VAMDAD----IELGGNDQKFNLLVGRFLQRAYGLNKEQSIITMPLLEGLDGVQKMSKSLG 238

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK---LQGKEINEAK 299
             + + +E   P   +    ++ D  +  +   L+   + EI+ +      Q       K
Sbjct: 239 NYVGITEE---PNAMFGKIMSVSDDLMWRYYTLLSAKTLEEIEDLKHGILNQTLHPKAVK 295

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKA 359
           + +A EI    +  E+A KA     + F  ++    +P I + + +   G+G+L ++ + 
Sbjct: 296 EDLAGEIVARYYDDEQAIKAKEQFSKVFSANL----LPEILL-ESDFDEGVGILDVLKQI 350

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           GF  ST++ARR ++   +KIN  ++ NE  +         GN  +  GKK  +  ++
Sbjct: 351 GFCPSTSQARRDIQGGGVKINQEVVKNESYRFVK------GNYVIQLGKKRFMKLNI 401


>gi|328860193|gb|EGG09300.1| hypothetical protein MELLADRAFT_77170 [Melampsora larici-populina
           98AG31]
          Length = 518

 Score =  360 bits (924), Expect = 3e-97,   Method: Composition-based stats.
 Identities = 129/463 (27%), Positives = 206/463 (44%), Gaps = 58/463 (12%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D +  L  R  I Q+++ R +         T Y+G D TASSLH G+L  L+ L      
Sbjct: 54  DVIHKLESRQLIAQLTS-RAVRQHLIDQPRTIYLGIDPTASSLHVGNLLALIGLVHFALN 112

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHK I L+GGGT I+GDPS R   R  +    +  N+E +    +  +          + 
Sbjct: 113 GHKTIVLLGGGTGIVGDPSGRSSERTSLSRSLVDSNVECLHKQVNKILDSALKHAQTRVR 172

Query: 127 -------------------NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ 167
                              NN  WL  +  +D L  +G    +  ML+ +SV+ R+    
Sbjct: 173 HTDDHQDSKSPQIWLHRVKNNMEWLSGLTLLDFLGSVGKIARIASMLARDSVKQRMDSGA 232

Query: 168 SLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--------- 218
            +SF EF Y +LQAYDF +L   YDC +Q+GGSDQ+GNI+ GI++  ++ T         
Sbjct: 233 GISFTEFTYQLLQAYDFNQLRHRYDCTIQLGGSDQYGNIMSGIEIMTKIGTHQKENNQSS 292

Query: 219 --------PKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVV 270
                   P+ + +T PLL    G K GK+   A+WL+  +T P + +Q +    D+++ 
Sbjct: 293 SELVETEIPQSYGVTLPLLLNHKGEKFGKSAGNALWLSSRLTPPVDLYQAFLRTPDSEID 352

Query: 271 SFAKRLTTLPMSEIDRMAKLQGK---EINEAKKIIATEITTMVHGREEAEKAATAAMEC- 326
            + + LT LP+  I+R+     K   +  E +K++A EI  +VHG E   +A +A     
Sbjct: 353 KYLRMLTFLPLEVINRVMDDHQKGDRQRREPQKLLAQEIILLVHGSEGLSQALSATEILH 412

Query: 327 -------------FDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLK 373
                        F  +      P     +     G  + ++ V +G   S  E R   +
Sbjct: 413 PSKGNLSMLTTNQFQDAF--DGSPHHIRLQSNKVLGCSIDSIAVLSGLCKSKGEVRSLKQ 470

Query: 374 SNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           S AI +N+  + +    I+  D  +   I L  GK  + +  +
Sbjct: 471 SGAITVNHQPLRDN--VIQDSDLLAGEFILLMRGKTAYKLVSI 511


>gi|317180539|dbj|BAJ58325.1| tyrosyl-tRNA synthetase [Helicobacter pylori F32]
          Length = 402

 Score =  360 bits (924), Expect = 3e-97,   Method: Composition-based stats.
 Identities = 98/390 (25%), Positives = 183/390 (46%), Gaps = 28/390 (7%)

Query: 32  SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESR 91
           +        G+D TA  LH GH   +  L  LQ+ G +   L+G  T++IGDP+ ++E+R
Sbjct: 35  TNERFIVKAGFDPTAPDLHLGHTVLIQKLALLQQYGARVKFLIGDFTAMIGDPTGKNETR 94

Query: 92  RMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVN 151
           + +  +++ EN +  +      +     +    +  N TWL ++    ++ E+ + FSV 
Sbjct: 95  KPLNREQVLENAKTYEEQIYKILD----QKHTEVCFNSTWLDTLGAKGMI-ELCAKFSVA 149

Query: 152 RMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGID 211
           RML  +    R K  + +S +EF Y +LQ YD V +  +    +++GG+DQ  N++ G  
Sbjct: 150 RMLERDDFTKRYKENRPISIVEFLYPLLQGYDSVAMDAD----IELGGNDQKFNLLVGRF 205

Query: 212 LGERLK-TPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADV 269
           L        +   +T PLL    G  KM K+L   + + +E   P   +    ++ D  +
Sbjct: 206 LQRAYGLNKEQSIITMPLLEGLDGVQKMSKSLGNYVGITEE---PNAMFGKIMSVSDDLM 262

Query: 270 VSFAKRLTTLPMSEIDRMAK---LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMEC 326
             +   L+   + EI+ +      Q       K+ +A EI    +  ++A KA     + 
Sbjct: 263 WRYYTLLSAKTLEEIEDLKHGILNQTLHPKAVKEDLAGEIVARYYDNDQAIKAKEQFSKV 322

Query: 327 FDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISN 386
           F  ++    +P I + + +   G+G+L ++ + GF  ST++ARR ++   +KIN  ++ N
Sbjct: 323 FSANL----LPEILL-ESDFDEGVGILDVLKQIGFCPSTSQARRDIQGGGVKINQEVVKN 377

Query: 387 EKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           E  +         GN  +  GKK  +  ++
Sbjct: 378 ESYRFVK------GNYVIQLGKKRFMKLNI 401


>gi|84622137|ref|YP_449509.1| tyrosyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae MAFF 311018]
 gi|108935931|sp|Q5H5K1|SYY_XANOR RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|115305832|sp|Q2P892|SYY_XANOM RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|84366077|dbj|BAE67235.1| tyrosyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae MAFF 311018]
          Length = 403

 Score =  359 bits (923), Expect = 3e-97,   Method: Composition-based stats.
 Identities = 99/412 (24%), Positives = 172/412 (41%), Gaps = 26/412 (6%)

Query: 12  LSERGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           L  RG   +I    +L+   + G  +    G+D TA  LH GH   L  +   Q+ GH+ 
Sbjct: 10  LIGRGA-EEILKLDQLEARLTSGVPLRVKAGFDPTAPDLHLGHTVLLNKMRQFQQLGHQV 68

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           I L+G  T +IGDPS ++ +R+ +  +++  N    +      +     +    +  N  
Sbjct: 69  IFLIGDFTGMIGDPSGKNATRKPLSREDVLANARTYEEQVFKILDRERTE----VRFNSE 124

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           W   +   D+++ + +  +V RML  +    R   +Q ++  EF Y ++Q YD V L  +
Sbjct: 125 WFGQMSAADMIK-LSAQHTVARMLERDDFAKRFGSQQPIAIHEFLYPLVQGYDSVALRAD 183

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNK 249
               +++GG+DQ  N++ G  L E         LT PLL    G  KM K+L   I +N+
Sbjct: 184 ----VELGGTDQKFNLLMGRGLQEHYGQAPQIVLTMPLLEGLEGVAKMSKSLGNYIGINE 239

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLT-TLPMSEIDRMAKLQGK---EINEAKKIIATE 305
                 +       I D     +   L+  + ++E  R+ +          E K  +A E
Sbjct: 240 PA---IDIVTKTMKIGDELTWRWIDLLSLDISVAEAVRLKEQVTSGELHPREVKLRLARE 296

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           + T  H    AE+A             +  +P   +     + G+ + +L+  AG   S 
Sbjct: 297 LATRFHDAATAEQAIAGWHAVVTGQGDTSLLPLQEVVVP--AEGLRIASLLTAAGLTPSN 354

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           +EA R LK  A+KI+  ++ +         F       +  GK+N     L 
Sbjct: 355 SEATRKLKERAVKIDGEVLEDATRV-----FTQGFEGVIQVGKRNFARVSLV 401


>gi|317177394|dbj|BAJ55183.1| tyrosyl-tRNA synthetase [Helicobacter pylori F16]
          Length = 402

 Score =  359 bits (923), Expect = 4e-97,   Method: Composition-based stats.
 Identities = 105/417 (25%), Positives = 193/417 (46%), Gaps = 36/417 (8%)

Query: 12  LSE--RGFIHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           L E  RG  ++I     ++ L  +            G+D TA  LH GH   +  L  LQ
Sbjct: 9   LKEIARGA-NEIIGLEYIEKLVRKYYETNERFIVKAGFDPTAPDLHLGHTVLIQKLALLQ 67

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + G +   L+G  T++IGDP+ ++E+R+ +  +++ EN +  +      +     +    
Sbjct: 68  QYGARVKFLIGDFTAMIGDPTGKNETRKPLNREQVLENAKTYEEQIYKILD----QKHTE 123

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           +  N TWL ++    ++ E+ + FSV RML  +    R K  + +S +EF Y +LQ YD 
Sbjct: 124 VCFNSTWLDALGAKGII-ELCAKFSVARMLERDDFTKRYKENRPISIVEFLYPLLQGYDS 182

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASG-TKMGKTLS 242
           V +  +    +++GG+DQ  N++ G  L        +   +T PLL    G  KM K+L 
Sbjct: 183 VAMDAD----IELGGNDQKFNLLVGRFLQRAYGLNKEQSVITMPLLEGLDGVQKMSKSLG 238

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK---LQGKEINEAK 299
             + + +E   P   +    ++ D  +  +   L+   + EI+ +      Q       K
Sbjct: 239 NYVGITEE---PNAMFGKIMSVSDDLMWRYYTLLSAKTLEEIEDLKHGILNQTLHPKAVK 295

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKA 359
           + +A EI    +  E+A KA     + F  ++    +P I + + +   G+G+L ++ + 
Sbjct: 296 EDLAGEIVARYYDNEQAIKAKEQFSKVFSANL----LPEILL-ESDFDEGVGILDVLKQI 350

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           GF  ST++ARR ++   +KIN  ++ NE  +         GN  +  GKK  +  ++
Sbjct: 351 GFCPSTSQARRDIQGGGVKINQEVVKNESYRFVK------GNYVIQLGKKRFMKLNI 401


>gi|218438278|ref|YP_002376607.1| tyrosyl-tRNA synthetase [Cyanothece sp. PCC 7424]
 gi|218171006|gb|ACK69739.1| tyrosyl-tRNA synthetase [Cyanothece sp. PCC 7424]
          Length = 406

 Score =  359 bits (923), Expect = 4e-97,   Method: Composition-based stats.
 Identities = 100/399 (25%), Positives = 176/399 (44%), Gaps = 25/399 (6%)

Query: 23  NPRELDILCSQ--GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSI 80
               L  L ++    +   +G D T S +H GH      L   Q  GH  + ++G  T+ 
Sbjct: 28  PEENLTQLLAKSDRPLRIKLGIDPTGSEIHLGHSIPFRKLRAFQDAGHTAVVIIGDFTAQ 87

Query: 81  IGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDL 140
           IGDP+ + E R+ +  Q+++ N E         + + T      +  N  WL  +   D+
Sbjct: 88  IGDPTGKSEVRKQLTPQQVKSNAEDYLNQLRPILDFDTP-GRLEIRYNSEWLSQLNLSDI 146

Query: 141 LREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGS 200
           L+ +G   +V +ML+ E    R ++E  +   EF Y ++Q YD V +  +    +++GG+
Sbjct: 147 LQLLG-TMTVGQMLAKEGFAQRYEQENPIYLHEFLYPLMQGYDSVAIDAD----VELGGT 201

Query: 201 DQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQ 259
           DQ  NI  G DL         F L  PLL    G  KM K+L+  + L ++     + + 
Sbjct: 202 DQKFNIAVGRDLQRFFGKKPQFGLLLPLLLGTDGVQKMSKSLNNYVGLREDAL---SMYS 258

Query: 260 YWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKA 319
                 DA +  + + LT LP+ +I            +A+K++A E+ +  HG E A+ A
Sbjct: 259 KLEKTPDAVIKDYFELLTNLPLDQI-------PSNPRDAQKLLALEVVSQFHGVEAAKSA 311

Query: 320 ATAAMECFDMS--IHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAI 377
             AA +         +  +P  S+S  E+     L  ++  +G  +S+ E RR ++  A+
Sbjct: 312 QKAAQDLVQGGSTASADAVPEFSLS--EIEFPAKLFYILNASGLCSSSGEGRRQIQGGAV 369

Query: 378 KINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +++   I+   L  +  +        L  GKK  +   L
Sbjct: 370 RLDGDRITEVDLTFESPEDLKDK--VLQVGKKKFVRLVL 406


>gi|328955875|ref|YP_004373208.1| tyrosyl-tRNA synthetase [Coriobacterium glomerans PW2]
 gi|328456199|gb|AEB07393.1| tyrosyl-tRNA synthetase [Coriobacterium glomerans PW2]
          Length = 406

 Score =  359 bits (922), Expect = 4e-97,   Method: Composition-based stats.
 Identities = 100/402 (24%), Positives = 179/402 (44%), Gaps = 21/402 (5%)

Query: 19  HQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGG 77
             I    +L    ++G  +   +G D T+S LH GH   L  L  LQ  GH+   ++G G
Sbjct: 16  ASIVPADDLRRKLARGVPLNIKLGVDPTSSDLHLGHAVPLRKLRQLQDLGHRVTLIIGNG 75

Query: 78  TSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKY 137
           T++IGDPS R+ +R  +   EI  N        +  +     +    +L N  W+ ++  
Sbjct: 76  TALIGDPSGRNSTRPQLTPDEIDANAATYVAQATKILDPDATE----VLYNAAWMLALDL 131

Query: 138 IDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQM 197
            DLL E+ S F+V R+L  +    R + +  ++  EF Y I+QAYD V++    +  +++
Sbjct: 132 KDLL-ELASRFTVARILERDDFTRRYESQTPIALHEFLYPIMQAYDSVKI----EADVEI 186

Query: 198 GGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYN 256
           GG+DQ  N++ G +L E+L      ALT PLL    G  KM K+    I L     +P  
Sbjct: 187 GGNDQLFNLLAGRELMEKLGMEPQVALTMPLLEGTDGVRKMSKSYGNYIGLT---DAPEE 243

Query: 257 FWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG---KEINEAKKIIATEITTMVHGR 313
            +    +I D  +  + +  ++    ++D +         +  E K+ +A EI    HG 
Sbjct: 244 MFGKTMSISDEMIPRYYRLASSRSPEQVDAIEAALADGSAQPYELKRQLAREIADTYHGA 303

Query: 314 EEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTNEARRHL 372
              ++A  A    F        +P + +  +    G + L  ++ +AG A S+ EARR +
Sbjct: 304 GAGDRAQAAFDRVFREGRLPSEVPGVFVDLEPGDDGTVYLAGVLRQAGLAGSSGEARRLI 363

Query: 373 KSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
               +++    ++     +  ++ +      +  GK+     
Sbjct: 364 DGGGVRVAGEQLAPGCYNLDPRELEGA---VVQVGKRRFARL 402


>gi|270307963|ref|YP_003330021.1| tyrosyl-tRNA synthetase [Dehalococcoides sp. VS]
 gi|270153855|gb|ACZ61693.1| tyrosyl-tRNA synthetase [Dehalococcoides sp. VS]
          Length = 396

 Score =  359 bits (922), Expect = 4e-97,   Method: Composition-based stats.
 Identities = 104/415 (25%), Positives = 183/415 (44%), Gaps = 27/415 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M   ++    IL  RG    I       +L S   +    G+D ++  +H GH+  L  L
Sbjct: 1   MNQAENRIDQILK-RGVAEVIVEEDFKKLLLSGKKLRLKEGFDPSSPDIHLGHMVALRKL 59

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             LQ  GH+ + ++G  T+ IGDPS    +R M+ +++++ N +     F   +     +
Sbjct: 60  RQLQDLGHQVVLIVGDWTAQIGDPSGASVTRPMLSAEQVKANAKTYLEQFFKIVDKDKTE 119

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
                     W  + K  D++R + S F+V +ML+ +    R    + +S  E  Y +LQ
Sbjct: 120 VRWQ----SEWYANFKLEDVVR-LSSKFTVAQMLARDDFAKRYAAGKPISVTELLYPMLQ 174

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGK 239
           AYD V +  +    ++ GG+DQ  N++ G +L E L       L  P+L    G  KM K
Sbjct: 175 AYDSVMVKSD----VEFGGTDQKFNLLVGRELQEMLGQKPQQVLMVPILVGTDGVHKMSK 230

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EIN 296
           +L   I + +E   P   +    +I D  ++ + + +T +P +EI               
Sbjct: 231 SLGNYIGVAEE---PTEIFGKCMSIPDELILQYFELVTDIPATEIADFKNQMANGLINPM 287

Query: 297 EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLI 356
             KK +A E+ T ++    AE+A              + MP   +   E  + + ++  I
Sbjct: 288 VLKKRLARELITQLYSTAAAEEADAQFTRVVQRGEIPEDMPECRL---ENGKSICVIDFI 344

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           +KA  A S +EARR L+   ++IN++ IS+    +K  D        +  GK+ +
Sbjct: 345 IKADLAKSKSEARRLLEQGGVEINSAKISDPGTTVKCGD-------IIKAGKRRY 392


>gi|51892260|ref|YP_074951.1| tyrosyl-tRNA synthetase [Symbiobacterium thermophilum IAM 14863]
 gi|81389194|sp|Q67QD6|SYY_SYMTH RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|51855949|dbj|BAD40107.1| tyrosyl-tRNA synthetase [Symbiobacterium thermophilum IAM 14863]
          Length = 408

 Score =  359 bits (922), Expect = 4e-97,   Method: Composition-based stats.
 Identities = 95/417 (22%), Positives = 181/417 (43%), Gaps = 30/417 (7%)

Query: 9   LSILSERGFIHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           + IL  RG +  + +  EL     +       +   +G D T   L  GH   L  L   
Sbjct: 12  MKILM-RGVV-DLVSEEELRQKLERSVKTGRPLRVKLGIDPTGKDLTLGHTVPLRKLRDF 69

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
            + GH+ + ++G  T+++GDP+ R+E+R  +   E   N ++     +  +      +  
Sbjct: 70  VECGHQGVLIIGDYTAMVGDPTGRNEARPQLTHAETTANAQRYLEQAARVLDV----SKL 125

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            +  N  WL  + + D++R + +  +V RML  E  + R +  + +   EF Y ++Q  D
Sbjct: 126 EIRRNSEWLAPMSFSDVIR-LAAKSTVARMLEREDFKKRYEEGRPIFIHEFFYPLMQGTD 184

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLS 242
            V +  +    +++GG+DQ  N++ G DL           L +P++    G  KM K+L 
Sbjct: 185 SVAVQAD----VELGGTDQKFNLLAGRDLQRDAGQEPQVCLMTPIVEGLDGVQKMSKSLG 240

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKK 300
             I L+    +P   +    +I D+ ++++    T +P  EI+R+      G+     KK
Sbjct: 241 NYIGLDH---TPDEMFGRTMSIPDSLIITYFTYFTDVPQEEIERIEAAMAAGENPMTFKK 297

Query: 301 IIATEITTMVHG-REEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKA 359
            +   I T   G  EEA  A    +  F      + +P + +   E+   M    ++  A
Sbjct: 298 QLGRAIITTYGGTEEEARLAEERWVAQFSRGEVPEDIPDVVLPAAEL--PMQAARVLFTA 355

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           G A S +EARR ++     ++   +++ + ++ L+         L  GK+ +    L
Sbjct: 356 GLAPSLSEARRLIEQGGFTVDGEKVTDPRAELALRPGQ-----VLKAGKRKYGRVVL 407


>gi|297183455|gb|ADI19587.1| tyrosyl-tRNA synthetase [uncultured Acidobacteria bacterium
           HF0770_27F21]
          Length = 407

 Score =  359 bits (922), Expect = 5e-97,   Method: Composition-based stats.
 Identities = 96/424 (22%), Positives = 174/424 (41%), Gaps = 31/424 (7%)

Query: 2   PAFKSDFLSILSERGFIHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQ 56
           PA K      L   G +  + +   L+    +       +   +G+D +A+ +H GH   
Sbjct: 5   PAVKEQI--ELLRHGAV-DLISEEGLEKKLERSQATGKPLIVKVGFDPSAADIHLGHTVV 61

Query: 57  LMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY 116
           +  +   Q  GH+ + ++G  T++IGDPS +  +R  +   E++EN E  +      +  
Sbjct: 62  IRKMKQFQDLGHQVVFVVGDFTAMIGDPSGKSATRPQLTRGEVRENAETYRQQAFKILSS 121

Query: 117 GTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNY 176
              +    +  N TWL  +     +   G + +V RML  +    R    Q +   E  Y
Sbjct: 122 DKSR----LEFNSTWLEDLGAGGFIELAGKY-TVARMLERDDFEKRFNNNQPIGVHELLY 176

Query: 177 MILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT- 235
            + QAYD V L    +  ++MGG+DQ  N++ G  +           LT PLL    G  
Sbjct: 177 PLAQAYDSVVL----EADVEMGGTDQLFNLLVGRSIMREYGQEPQAVLTLPLLVGTDGVE 232

Query: 236 KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK-- 293
           KM K+L   I +     +P   +    +I D  + S+ +  T+LP  +I+ +    G   
Sbjct: 233 KMSKSLGNYIAVE---DTPKEMFGKVMSISDELMWSYYELCTSLPAEQIEVIRSQVGSGD 289

Query: 294 -EINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGL 352
                AK+ ++  I    HG E A  A       F        +   +    + +    +
Sbjct: 290 LHPKAAKQRLSRIIVADFHGEEAAAGALEEFDNIFREGGLPDDI---TGHGFDGAEPAWI 346

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           + ++ + GFA+S  EARR L   A+ ++   I++++  +     +      L  GK+   
Sbjct: 347 IQVMRECGFASSNGEARRLLAQGAVSLDGERITSDEAMVP----NDGNERILKVGKRRFA 402

Query: 413 ICHL 416
              +
Sbjct: 403 RVKV 406


>gi|160901549|ref|YP_001567130.1| tyrosyl-tRNA synthetase [Petrotoga mobilis SJ95]
 gi|160359193|gb|ABX30807.1| tyrosyl-tRNA synthetase [Petrotoga mobilis SJ95]
          Length = 397

 Score =  359 bits (922), Expect = 5e-97,   Method: Composition-based stats.
 Identities = 111/413 (26%), Positives = 185/413 (44%), Gaps = 27/413 (6%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D L I+ E   +  I+    L+ L  +G +   +G D + + LH GH   L  L   Q+ 
Sbjct: 5   DQLRIIQE-DSVDFITPEDFLNKLREKGQLKVKLGVDPSRADLHLGHAVVLRKLKQFQEL 63

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH    ++G  T+ IGDPS R ++R ++   E++EN +         +         ++ 
Sbjct: 64  GHIVYLIIGDFTARIGDPSGRSKTRPLLSEDEVRENSKTYVEQAFRILHPDKT----VVK 119

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
            N  WL  + + D++  + S ++V RML  +    RLK  Q +S  EF Y + QAYD + 
Sbjct: 120 FNSEWLSKLSFADII-NLSSRYTVARMLERDDFSKRLKENQPISISEFLYPLAQAYDSIV 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAI 245
           +    +  +++GG+DQ  N++ G  L E         LT PL+    G  KM K+    I
Sbjct: 179 I----EADVELGGTDQLFNLLVGRKLQEEFGQSPQVVLTMPLIEGTDGYLKMSKSYDNYI 234

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMS---EIDRMAKLQGKEINEAKKII 302
             N    SP + +    +I D  ++ + K LT  P     +I+   K +     + K ++
Sbjct: 235 AFN---DSPQDIFGKVMSIPDHLIIKYMKYLTDTPKDKIKDIENQMKSEEVNPRDIKMVL 291

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFA 362
           A EI  +++ +EEAEKA    +  F      + +P I I   E      +L ++ K    
Sbjct: 292 AEEIVNLLYNKEEAEKAKQNFVSIFQKREMPEDLPEIQIKSGE-----TILDIVSKTNVY 346

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            S +E +R +   AI+IN+  I + K  +   D        L  GKK+     
Sbjct: 347 DSNSEIKRAIMQGAIRINDEKIKDFKDVVDCDD-----GAILRVGKKSFFKIK 394


>gi|307151866|ref|YP_003887250.1| tyrosyl-tRNA synthetase [Cyanothece sp. PCC 7822]
 gi|306982094|gb|ADN13975.1| tyrosyl-tRNA synthetase [Cyanothece sp. PCC 7822]
          Length = 405

 Score =  359 bits (921), Expect = 6e-97,   Method: Composition-based stats.
 Identities = 95/397 (23%), Positives = 170/397 (42%), Gaps = 25/397 (6%)

Query: 23  NPRELDILCSQ--GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSI 80
               L  L ++    +   +G D T + +H GH      L   Q  GH  + ++G  T+ 
Sbjct: 28  PQENLTQLLAKIDRPLRVKLGIDPTGTEIHLGHSIPFRKLRAFQDAGHTAVVIIGDFTAQ 87

Query: 81  IGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDL 140
           IGDP+ + E R+ + +++++EN           + + T      +  N  WL  +   D+
Sbjct: 88  IGDPTGKSEVRKQLTAEQVRENAHDYLKQLRPILDFDTP-GRLEIRYNSEWLGKLDLSDI 146

Query: 141 LREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGS 200
           ++ + S  +V +ML+ E    R ++E  +   EF Y ++Q YD V +  +    +++GG+
Sbjct: 147 IKLL-STMTVGQMLAKEGFAERYEKETPIYLHEFLYPLMQGYDSVAIDAD----VELGGT 201

Query: 201 DQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQ 259
           DQ  NI  G DL         F L  P++    G  KM K+L+  + L ++     + + 
Sbjct: 202 DQKFNIAVGRDLQRYFGKKPQFGLLLPIILGTDGVQKMSKSLNNYVGLREDAL---SMYS 258

Query: 260 YWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKA 319
               I DA +  + + LT L + E+            E +K++ATEI +  H  E A +A
Sbjct: 259 KLEKIPDAVIKDYFELLTNLSLQEL-------PSNPRECQKLLATEIVSQYHSVEAAAEA 311

Query: 320 ATAAMECFDMSI--HSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAI 377
             AA+          +  +P  S+S  E      L  ++      +S+ E RR ++  A+
Sbjct: 312 QKAAIALVQGGGTTSTDAVPEYSLSGIEF--PAKLFYILSATRLCSSSGEGRRQIQGGAV 369

Query: 378 KINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +++   IS   L              L  GKK  +  
Sbjct: 370 RLDGERISEVDLTFDSPQQLQGK--VLQVGKKKFVRL 404


>gi|260553758|ref|ZP_05826028.1| tyrosyl-tRNA synthetase [Acinetobacter sp. RUH2624]
 gi|260405062|gb|EEW98562.1| tyrosyl-tRNA synthetase [Acinetobacter sp. RUH2624]
          Length = 410

 Score =  359 bits (921), Expect = 6e-97,   Method: Composition-based stats.
 Identities = 100/420 (23%), Positives = 178/420 (42%), Gaps = 28/420 (6%)

Query: 6   SDFL--SI---LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           S+FL       L +RG    IS    L  L     +    G+D TA  LH GH   +  L
Sbjct: 8   SNFLPAEEQLALIQRGTHEIISEEDLLKKLKENRPLKIKAGFDPTAPDLHLGHTVLINKL 67

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GH+   L+G  T++IGDP+ +  +R  +  ++++ N +  +      +     K
Sbjct: 68  KTFQDLGHEVTFLIGDYTAMIGDPTGKSATRPPLSREQVEANAKTYQEQVFKILDPNKTK 127

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N  W       DL+ ++ S  +V+RML  +    R    Q ++  EF Y ++Q
Sbjct: 128 ----VRFNSEWFNQKSAADLI-QLASQQTVSRMLERDDFTKRYSNHQPIAIHEFLYPLVQ 182

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGK 239
            YD + L    +  +++GG+DQ  N++ G  L  R        +T P+L    G  KM K
Sbjct: 183 GYDSIAL----EADVELGGTDQTFNLLMGRTLQSRYGQESQVCITVPILEGLDGVNKMSK 238

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINE 297
           +L   I +     +P   +Q   ++ D+ +  +   L+   + EI         G+   E
Sbjct: 239 SLGNYIGV---FDAPGAMYQKVLSMPDSLIERYFDLLSFKSLDEIKALLDEIAAGRNPQE 295

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K+I+A E+    H  E A  A  +A          +  P ++IS+ E    + + T++ 
Sbjct: 296 VKRILALELVERFHDAEAAANAHKSAGNRITEGEVPEDTPEVTISRGEFGGEIFIATILR 355

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            AG   +   A+  +   A+K++ +++ +    +K       G   +  GKK   I  + 
Sbjct: 356 VAGLNPNAAAAKDAVARGAVKVDWNVV-DAGFSVKE-----NGTFIIQSGKK--AIARVT 407


>gi|297379972|gb|ADI34859.1| tyrosyl-tRNA synthetase [Helicobacter pylori v225d]
          Length = 402

 Score =  359 bits (921), Expect = 6e-97,   Method: Composition-based stats.
 Identities = 104/417 (24%), Positives = 193/417 (46%), Gaps = 36/417 (8%)

Query: 12  LSE--RGFIHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           L E  RG  ++I     ++ L  +            G+D TA  LH GH   +  L  LQ
Sbjct: 9   LKEIARGA-NEIIGLEYIEKLVRKYYETNERFIVKAGFDPTAPDLHLGHTVLIQKLALLQ 67

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + G +   L+G  T++IGDP+ ++E+R+ +  +++ EN +  +      +     +    
Sbjct: 68  QYGARVKFLIGDFTAMIGDPTGKNETRKPLNREQVLENAKTYEEQIYKILD----QKHTE 123

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           +  N TWL ++    ++ E+ + FSV RML  +    R K  + +S +EF Y +LQ YD 
Sbjct: 124 VCFNSTWLDALGAKGII-ELCAKFSVARMLERDDFTKRYKENRPISIVEFLYPLLQGYDS 182

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASG-TKMGKTLS 242
           V +  +    +++GG+DQ  N++ G  L        +   +T PLL    G  KM K+L 
Sbjct: 183 VAMDAD----IELGGNDQKFNLLVGRFLQRAYGLNKEQSVITMPLLEGLDGVQKMSKSLG 238

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK---LQGKEINEAK 299
             + + +E   P   +    ++ D  +  +   L+   + EI+ +      Q       K
Sbjct: 239 NYVGITEE---PNAMFGKIMSVSDDLMWRYYTLLSAKTLEEIEDLKHGILNQTLHPKAVK 295

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKA 359
           + +A EI    +  ++A KA     + F  ++    +P I + + +   G+G+L ++ + 
Sbjct: 296 EDLAGEIVARYYDNDQAIKAKEQFSKVFSANL----LPEILL-ESDFDEGVGILDVLKQI 350

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           GF  ST++ARR ++   +KIN  ++ NE  +         GN  +  GKK  +  ++
Sbjct: 351 GFCPSTSQARRDIQGGGVKINQEVVKNESYRFVK------GNYVIQLGKKRFMKLNI 401


>gi|332708551|ref|ZP_08428525.1| tyrosyl-tRNA synthetase [Lyngbya majuscula 3L]
 gi|332352648|gb|EGJ32214.1| tyrosyl-tRNA synthetase [Lyngbya majuscula 3L]
          Length = 410

 Score =  359 bits (921), Expect = 6e-97,   Method: Composition-based stats.
 Identities = 94/399 (23%), Positives = 168/399 (42%), Gaps = 23/399 (5%)

Query: 19  HQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGT 78
              S    + +  ++  +   +G D T + LH GH   +  L   Q  GH  + ++G  T
Sbjct: 30  QDPSENLAIRLKQAERPLRVKLGIDPTGADLHLGHSIPVRKLRAFQDAGHTAVLIIGDFT 89

Query: 79  SIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYI 138
           + IGDP+ + E RR +   +++EN E         + + T      +  N  WL  +   
Sbjct: 90  ARIGDPTGKSEVRRQLTPAQVKENAETYLSQVRPILDFDTP-GRLEIRYNSEWLNQLDLS 148

Query: 139 DLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMG 198
           +++ E+ +  +V +ML+ E    R +++  +   EF Y ++Q YD V +  +    +++G
Sbjct: 149 EII-ELLATMTVGQMLAKEGFAERYQQQNPIFLHEFLYPLMQGYDSVAVKAD----VELG 203

Query: 199 GSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNF 257
           G+DQ  NI  G DL         F L  P+L    G  KM K+L   + L+ +   P   
Sbjct: 204 GTDQKFNIALGRDLQRHFGQSPQFGLLLPILIGTDGIQKMSKSLGNYVGLSDD---PLTM 260

Query: 258 WQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAE 317
           +       D  +  + + LT +P+ ++         +  E +K +A  I T  HG   A+
Sbjct: 261 YSKLEGTPDHLLTQYFELLTDVPLDQLPE-------QPREQQKQLALTIVTQYHGEAAAK 313

Query: 318 KAATAAMECFDMS--IHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSN 375
           +A  AA+     S       +P  S+S  +      L  ++ ++G   S+ E RR ++  
Sbjct: 314 EAQQAALNLVKGSTTGTGDSVPEFSLSSVDF--PAKLFYILKESGLCQSSGEGRRQIQGG 371

Query: 376 AIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +K++   IS         D        L  GKK     
Sbjct: 372 GVKLDGDRISAVDQTFDSPDQLVGK--VLQVGKKKFARL 408


>gi|299768264|ref|YP_003730290.1| tyrosyl-tRNA synthetase [Acinetobacter sp. DR1]
 gi|298698352|gb|ADI88917.1| tyrosyl-tRNA synthetase [Acinetobacter sp. DR1]
          Length = 410

 Score =  359 bits (921), Expect = 7e-97,   Method: Composition-based stats.
 Identities = 100/420 (23%), Positives = 177/420 (42%), Gaps = 28/420 (6%)

Query: 6   SDFL--SI---LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           S+FL       L +RG    IS    L  L     +    G+D TA  LH GH   +  L
Sbjct: 8   SNFLPAEEQLALIQRGTHEIISEEDLLKKLKENRPLKIKAGFDPTAPDLHLGHTVLINKL 67

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GH+   L+G  T++IGDP+ +  +R  +  ++++ N +  +      +     K
Sbjct: 68  KTFQDLGHEVTFLIGDYTAMIGDPTGKSATRPPLSREQVEANAKTYQEQVFKILDPNKTK 127

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N  W       DL+ ++ S  +V+RML  +    R    Q ++  EF Y ++Q
Sbjct: 128 ----VRFNSEWFNQKSAADLI-QLASQQTVSRMLERDDFTKRYSNHQPIAIHEFLYPLVQ 182

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGK 239
            YD + L    +  +++GG+DQ  N++ G  L  R        +T P+L    G  KM K
Sbjct: 183 GYDSIAL----EADVELGGTDQTFNLLMGRTLQSRYGQESQVCITVPILEGLDGVNKMSK 238

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINE 297
           +L   I +     +P   +Q   ++ D+ +  +   L+   + EI         G+   E
Sbjct: 239 SLGNYIGV---FDTPGAMYQKVLSMPDSLIERYFDLLSFKSLDEIKALLEEIAAGRNPQE 295

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K+I+A E+    H  E A  A  +A          +  P ++IS+ E    + + T++ 
Sbjct: 296 VKRILALELVERFHDAEAAANAHKSAGNLITEGEVPEDTPEVTISRGEFGGEIFIATILR 355

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            AG   +   A+  +   A+K++ + + +    +K       G   +  GKK   I  + 
Sbjct: 356 VAGLNPNAAAAKDAVARGAVKVDWNAV-DAGFSVKE-----NGTFIIQSGKK--AIARVT 407


>gi|194333540|ref|YP_002015400.1| tyrosyl-tRNA synthetase [Prosthecochloris aestuarii DSM 271]
 gi|194311358|gb|ACF45753.1| tyrosyl-tRNA synthetase [Prosthecochloris aestuarii DSM 271]
          Length = 406

 Score =  358 bits (920), Expect = 7e-97,   Method: Composition-based stats.
 Identities = 100/401 (24%), Positives = 176/401 (43%), Gaps = 26/401 (6%)

Query: 20  QISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLM 74
           ++ +  EL+    +       +   +G D +   LH GH   L  L   Q  GH+ I ++
Sbjct: 19  EVISEEELEKKLDKSIKTGKPLKVKLGADPSRPDLHLGHSVVLRKLRDFQDLGHEAILII 78

Query: 75  GGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCS 134
           G  T++IGDPS + ++R  + +QE +EN E      S  +          +  N  WL  
Sbjct: 79  GDFTAMIGDPSGKSKTRPQLSAQEARENGETYFEQASKILD----PEKTTICYNSEWLGK 134

Query: 135 IKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCR 194
           + + D++R + S ++V RML  +    R +  + +S  EF Y + Q  D V L  +    
Sbjct: 135 MTFSDVIR-LSSHYTVARMLERDDFERRYQSCEPISIHEFLYPLAQGMDSVHLKND---- 189

Query: 195 LQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTS 253
           +++GG+DQ  N++ G DL           +T PLL    G  KM K+L  AI        
Sbjct: 190 IELGGTDQKFNLLVGRDLQREYHIDPQVCITMPLLVGTFGDEKMSKSLGNAISFTDSAQ- 248

Query: 254 PYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGR 313
             + +    +I D+ + ++ K L   P   I    ++  +   EAK+ +A E+  + H  
Sbjct: 249 --DVYGKTLSIPDSLIETWFKLLVPQPRQSIKLFMEIIRQNPREAKRTLARELVALYHCD 306

Query: 314 EEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLK 373
            +A KA       F      +++   +         M L+ L+ +     S +EARR ++
Sbjct: 307 TDAVKAEEHFDRVFVQKKAPENIEVFTFRSST----MQLVELLGELQAVGSKSEARRLIQ 362

Query: 374 SNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            NAI+I++  IS+   +++L D        +  GK+     
Sbjct: 363 QNAIQIDDEKISSIDYEVELNDTPK----IIKAGKRKFFKV 399


>gi|315051842|ref|XP_003175295.1| tyrosyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
 gi|311340610|gb|EFQ99812.1| tyrosyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
          Length = 597

 Score =  358 bits (920), Expect = 7e-97,   Method: Composition-based stats.
 Identities = 132/489 (26%), Positives = 203/489 (41%), Gaps = 78/489 (15%)

Query: 5   KSDFLSILSERGFIHQIS--NPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
           K  FLS + ERG IH +   +   LD + +   V  Y G D TA S+H GH+   M+L W
Sbjct: 20  KQSFLSFMEERGLIHSVIGGDRDALDKMITNKRVGLYAGIDPTAPSMHVGHMLPFMILGW 79

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSF--------I 114
               G K + L+GG TS +GDP+ R  +R ++ +   +  I  +                
Sbjct: 80  AYVHGMKSVWLLGGSTSRVGDPTGRTTARPLLSNASRKAYIANMHMQLKKLGASFERYGG 139

Query: 115 KYGTGKTDALML---NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSF 171
           K+G     A      NN TW      ID+L  +G    +  ML  E V++RL+    +SF
Sbjct: 140 KHGYSWEWAWRRALENNNTWWNKETLIDVLGTLGQHARIGTMLGREPVKTRLESGSGMSF 199

Query: 172 LEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL------KTPK----- 220
            EF Y I+QA+D+  L +     +Q+GGSDQ GNI  GID  +++      +T       
Sbjct: 200 TEFCYPIMQAWDWWHLYQK-GVMIQVGGSDQSGNIQFGIDTIKQVLKTSPIETKPGEDPE 258

Query: 221 ---LFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT 277
               F LT PLLTT++G K+GK+   +IWL+K+MTS Y+ +QY+    D D+    K  T
Sbjct: 259 LSMPFGLTVPLLTTSTGEKIGKSAGNSIWLDKDMTSTYDLYQYFMRQPDQDMERLLKMFT 318

Query: 278 TLPMSEIDRMAKLQGKEI--NEAKKIIATEITTMVHGREEAEKAATAAMECFDMS----- 330
            LP   I  + +   KE     A+  +A E   +VHG +EAE A+ A    F        
Sbjct: 319 FLPTVRIHEIIEEHNKEPSRRIAQHALAQEFVELVHGPKEAEDASKAHKAIFQPQGSAST 378

Query: 331 --------IHSQHMPT---------------ISISKDEVSRGMGLL------TLIVKAGF 361
                   +    +P                 +     +     L+       ++  AG 
Sbjct: 379 KSDTKSIPLSPSGIPEFINAGVNKNAPQMNAFTAPTHHLVLPRSLVVGQYFHKILYSAGM 438

Query: 362 ATSTNEARRHLKSNAIKI-----NNSIISNE---------KLQIKLQDFDSTGNIKLSFG 407
            +S  E  R + +N   +         + +             +  +       + L  G
Sbjct: 439 VSSKQEGHRIIVNNGASVGCMPSGAEQMGDALSYVPLRTWPADVTEKFLIDGSLLILRIG 498

Query: 408 KKNHIICHL 416
           K    I  +
Sbjct: 499 KWRVKIIKV 507


>gi|308062095|gb|ADO03983.1| tyrosyl-tRNA synthetase [Helicobacter pylori Cuz20]
          Length = 402

 Score =  358 bits (920), Expect = 8e-97,   Method: Composition-based stats.
 Identities = 104/417 (24%), Positives = 192/417 (46%), Gaps = 36/417 (8%)

Query: 12  LSE--RGFIHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           L E  RG  ++I     ++ L  +            G+D TA  LH GH   +  L  LQ
Sbjct: 9   LKEIARGA-NEIIGLEYIEKLVRKYYETNERFIVKAGFDPTAPDLHLGHTVLIQKLALLQ 67

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + G +   L+G  T++IGDP+ ++E+R+ +  +++ EN +  +      +     +    
Sbjct: 68  QYGARVKFLIGDFTAMIGDPTGKNETRKPLNREQVLENAKTYEEQIYKILD----QKHTE 123

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           +  N TWL ++    ++ E+ + FSV RML  +    R K  + +S +EF Y +LQ YD 
Sbjct: 124 VCFNSTWLDALGAKGII-ELCAKFSVARMLERDDFTKRYKENRPISIVEFLYPLLQGYDS 182

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASG-TKMGKTLS 242
           V +  +    +++GG+DQ  N++ G  L        +   +T PLL    G  KM K+L 
Sbjct: 183 VAMDAD----IELGGNDQKFNLLVGRFLQRAYGLNKEQSVITMPLLEGLDGVQKMSKSLG 238

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK---LQGKEINEAK 299
             + + +E   P   +    ++ D  +  +   L+   + EI+ +      Q       K
Sbjct: 239 NYVGITEE---PNAMFGKIMSVSDDLMWRYYTLLSAKTLEEIEDLKHGILNQTLHPKAVK 295

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKA 359
           + +A EI    +  ++A KA     + F  ++    +P I + + +   G+G+L ++ + 
Sbjct: 296 EDLAGEIVARYYDNDQAIKAKEQFSKVFSANL----LPEILL-ESDFDEGVGILDVLKQI 350

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           GF  ST++ARR ++   +KIN   I +E  +         GN  +  GKK  +  ++
Sbjct: 351 GFCPSTSQARRDIQGGGVKINQEAIKDEGYRFVK------GNYVIQLGKKRFMKLNI 401


>gi|237751118|ref|ZP_04581598.1| tyrosyl-tRNA synthetase [Helicobacter bilis ATCC 43879]
 gi|229373563|gb|EEO23954.1| tyrosyl-tRNA synthetase [Helicobacter bilis ATCC 43879]
          Length = 415

 Score =  358 bits (920), Expect = 9e-97,   Method: Composition-based stats.
 Identities = 102/385 (26%), Positives = 177/385 (45%), Gaps = 27/385 (7%)

Query: 38  AYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQ 97
              G+D TA  LH GH   L  L   Q  G +   L+G  T+ IGDPS + E+R+ +  +
Sbjct: 50  VKAGFDPTAPDLHLGHSVLLQKLATFQNYGGRVKFLIGDFTATIGDPSGKSETRKPLTFE 109

Query: 98  EIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFE 157
           E+ +N +  +      +     K    +  N  WL S+  ++++ ++ + +SV RM+  +
Sbjct: 110 EVAQNAKTYEEQVFKIL----NKDKTDICFNSKWLGSLTSVNIM-QLTAQYSVARMMERD 164

Query: 158 SVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK 217
               R K  Q +S +EF Y +LQ YD V L     C +++GG+DQ  N++ G  L     
Sbjct: 165 DFTKRFKENQPISIVEFMYPLLQGYDSVALN----CDIELGGNDQKFNLLVGRALQRAYN 220

Query: 218 -TPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKR 275
              +   +T PLL    G  KM K+L   I +     SP + +    +IDD  +  + + 
Sbjct: 221 CGKEQSVMTMPLLEGLDGVNKMSKSLKNYIGVT---DSPNDMYAKILSIDDTLMWRYYEL 277

Query: 276 LTTLPMSEID---RMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIH 332
           ++T  ++EI    R  +         K+ ++ EITT  H    A +A  A    F     
Sbjct: 278 ISTKSLAEIAKLKRGVETGELHPKAVKEELSLEITTRFHNESLAIQAKEAFNAIFSNKEI 337

Query: 333 SQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
            + + T      E+ +G  +  ++V+ GF+ ST++ARR +K+ A+ I+ +  ++E     
Sbjct: 338 PKDIET-----KEIQKGEWICKVLVELGFSPSTSQARRDIKAGALSIDQAKQTDENF--- 389

Query: 393 LQDFDSTGNIKLSFGKKNHIICHLC 417
              F   G   +  GK+      + 
Sbjct: 390 --HFLQEGEFIIKLGKRKFAKIIIV 412


>gi|313679536|ref|YP_004057275.1| tyrosyl-tRNA synthetase [Oceanithermus profundus DSM 14977]
 gi|313152251|gb|ADR36102.1| tyrosyl-tRNA synthetase [Oceanithermus profundus DSM 14977]
          Length = 435

 Score =  358 bits (919), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 106/442 (23%), Positives = 181/442 (40%), Gaps = 54/442 (12%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG    I+       L S   +   +G D T   LH GH   L  +   Q+ GHK I
Sbjct: 9   LLRRGTAEIITEADLKQKLASGRPLRIKLGVDPTRPDLHLGHAVVLRKMRQFQELGHKVI 68

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T +IGDPS R ++R  +  +E +EN           ++         +  N  W
Sbjct: 69  LLIGDFTGMIGDPSGRSKTRPPLTLEETRENARSYVEQARKILRQEPE--VFELRYNSEW 126

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L  + + +++R I +  +V +ML  E  + R      +   EF Y + Q YD V L    
Sbjct: 127 LAKLTFEEVIR-IAAQMTVAQMLEREDFKKRYTEGVPIGIHEFLYPLAQGYDSVAL---- 181

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKE 250
           +  ++MGG+DQ  N++ G DL +         +  PLL    G  KM K+L   + +++E
Sbjct: 182 EADVEMGGTDQKFNLLVGRDLQKFYGQEPQVLVIMPLLVGLDGVEKMSKSLDNYVGVSEE 241

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMV 310
              P   ++    + DA +  + + LT L   E++ + +  G  +  A +++A  +T   
Sbjct: 242 ---PAVMFKKLMRVPDAVLADYFRLLTDLEPEEVEAVIEKGG--MVGAHRVLARLLTAAY 296

Query: 311 ------------------------------HGREEAEKA-----ATAAMECFDMSIHSQH 335
                                            +EAE A     A A  +          
Sbjct: 297 AQDVIPAWLDRAFYERLGYRFDEAGRDEAPRDPQEAELARTVAQAEARYDEVAKGGVPDD 356

Query: 336 MPTISISKDEVSRG-MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
           +PT++I   E+  G + +  L   AG   S  EARR +++  ++++  +I++ +LQ+ L 
Sbjct: 357 IPTVAIDPSELKDGAIWVARLFTLAGLTQSNGEARRLIQNRGLRLDGEVITDPQLQVTL- 415

Query: 395 DFDSTGNIKLSFGKKNHIICHL 416
                    L  GK   +   L
Sbjct: 416 ----DRPRILRRGKDKFVRVVL 433


>gi|184159979|ref|YP_001848318.1| tyrosyl-tRNA synthetase [Acinetobacter baumannii ACICU]
 gi|213155371|ref|YP_002317416.1| tyrosyl-tRNA synthetase [Acinetobacter baumannii AB0057]
 gi|215481775|ref|YP_002323957.1| tyrosyl-tRNA synthetase [Acinetobacter baumannii AB307-0294]
 gi|239503896|ref|ZP_04663206.1| tyrosyl-tRNA synthetase [Acinetobacter baumannii AB900]
 gi|260558106|ref|ZP_05830317.1| tyrosyl-tRNA synthetase [Acinetobacter baumannii ATCC 19606]
 gi|301347692|ref|ZP_07228433.1| tyrosyl-tRNA synthetase [Acinetobacter baumannii AB056]
 gi|301513278|ref|ZP_07238515.1| tyrosyl-tRNA synthetase [Acinetobacter baumannii AB058]
 gi|301596725|ref|ZP_07241733.1| tyrosyl-tRNA synthetase [Acinetobacter baumannii AB059]
 gi|332854727|ref|ZP_08435514.1| tyrosine--tRNA ligase [Acinetobacter baumannii 6013150]
 gi|332867406|ref|ZP_08437584.1| tyrosine--tRNA ligase [Acinetobacter baumannii 6013113]
 gi|332873321|ref|ZP_08441276.1| tyrosine--tRNA ligase [Acinetobacter baumannii 6014059]
 gi|183211573|gb|ACC58971.1| Tyrosyl-tRNA synthetase [Acinetobacter baumannii ACICU]
 gi|213054531|gb|ACJ39433.1| tyrosyl-tRNA synthetase [Acinetobacter baumannii AB0057]
 gi|213986874|gb|ACJ57173.1| tyrosyl-tRNA synthetase [Acinetobacter baumannii AB307-0294]
 gi|260408460|gb|EEX01767.1| tyrosyl-tRNA synthetase [Acinetobacter baumannii ATCC 19606]
 gi|323519901|gb|ADX94282.1| tyrosyl-tRNA synthetase [Acinetobacter baumannii TCDC-AB0715]
 gi|332727884|gb|EGJ59286.1| tyrosine--tRNA ligase [Acinetobacter baumannii 6013150]
 gi|332734002|gb|EGJ65144.1| tyrosine--tRNA ligase [Acinetobacter baumannii 6013113]
 gi|332738527|gb|EGJ69399.1| tyrosine--tRNA ligase [Acinetobacter baumannii 6014059]
          Length = 410

 Score =  358 bits (919), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 100/420 (23%), Positives = 177/420 (42%), Gaps = 28/420 (6%)

Query: 6   SDFL--SI---LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           S+FL       L +RG    IS    L  L     +    G+D TA  LH GH   +  L
Sbjct: 8   SNFLPAEEQLALIQRGTHEIISEEDLLKKLKENRPLKIKAGFDPTAPDLHLGHTVLINKL 67

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GH+   L+G  T++IGDP+ +  +R  +  ++++ N +  +      +     K
Sbjct: 68  KTFQDLGHEVTFLIGDYTAMIGDPTGKSATRPPLSREQVEANAKTYQEQVFKILDPNKTK 127

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N  W       DL+ ++ S  +V+RML  +    R    Q ++  EF Y ++Q
Sbjct: 128 ----VRFNSEWFNQKSAADLI-QLASQQTVSRMLERDDFTKRYNNHQPIAIHEFLYPLVQ 182

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGK 239
            YD + L    +  +++GG+DQ  N++ G  L  R        +T P+L    G  KM K
Sbjct: 183 GYDSIAL----EADVELGGTDQTFNLLMGRTLQSRYGQESQVCITVPILEGLDGVNKMSK 238

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINE 297
           +L   I +     +P   +Q   ++ D+ +  +   L+   + EI         G+   E
Sbjct: 239 SLGNYIGV---FDAPGAMYQKVLSMPDSLIERYFDLLSFKSLDEIKALLDEIAAGRNPQE 295

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K+I+A E+    H  E A  A  +A             P ++IS+ E    + + T++ 
Sbjct: 296 VKRILALELVERFHDAEAAANAHKSAGNRITEGEVPADTPEVTISRGEFGGEIFIATILR 355

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            AG   +   A+  +   A+K++ +++ +    +K       G   +  GKK   I  + 
Sbjct: 356 VAGLNPNAAAAKDAVARGAVKVDWNVV-DASFSVKE-----NGTFIIQSGKK--AIARVT 407


>gi|325919686|ref|ZP_08181688.1| tyrosyl-tRNA synthetase [Xanthomonas gardneri ATCC 19865]
 gi|325549794|gb|EGD20646.1| tyrosyl-tRNA synthetase [Xanthomonas gardneri ATCC 19865]
          Length = 403

 Score =  358 bits (919), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 102/413 (24%), Positives = 174/413 (42%), Gaps = 26/413 (6%)

Query: 12  LSERGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           L  RG   +I    +L+   + G  +    G+D TA  LH GH   L  +   Q+ GH+ 
Sbjct: 10  LIGRGA-EEILKLDQLEARLTSGVPLRVKAGFDPTAPDLHLGHTVLLNKMRQFQQLGHQV 68

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           I L+G  T +IGDPS ++ +R+ +   ++  N    +      +     +    +  N  
Sbjct: 69  IFLIGDFTGMIGDPSGKNVTRKPLSRDDVLANARTYEEQVFKILDRERTE----VRFNSE 124

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           W   +   D+++ + +  +V RML  +    R   +Q ++  EF Y ++Q YD V L  +
Sbjct: 125 WFGQMSAADMIK-LSAQHTVARMLERDDFAKRFSGQQPIAIHEFLYPLVQGYDSVALKAD 183

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNK 249
               +++GG+DQ  N++ G  L E         LT PLL    G  KM K+L   I +N+
Sbjct: 184 ----VELGGTDQKFNLLMGRGLQEHYGQAPQVVLTMPLLEGLDGVAKMSKSLGNYIGINE 239

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTT-LPMSEIDRMAKLQGK---EINEAKKIIATE 305
                 +       I D     +   L+  + ++E  R+ +          E K  +A E
Sbjct: 240 PA---IDIVTKTMKIGDELTWRWIDLLSFDISVAEAARLKEQVASGELHPREVKLRLARE 296

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           +TT  H    AE+A             +  +P   +     + G+ + +L+  AG   S 
Sbjct: 297 LTTRFHDAAAAEQAIAGWHAVVTGQGDTSLLPLQEVVVP--AEGLRIASLLTAAGLTPSN 354

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLCG 418
           +EA R LK  A+KI+  ++ +   Q     F       +  GK+N     L G
Sbjct: 355 SEATRKLKERAVKIDGEVVEDLARQ-----FGPGFEGVIQVGKRNFARVALVG 402


>gi|289666308|ref|ZP_06487889.1| tyrosyl-tRNA synthetase [Xanthomonas campestris pv. vasculorum
           NCPPB702]
 gi|289671118|ref|ZP_06492193.1| tyrosyl-tRNA synthetase [Xanthomonas campestris pv. musacearum
           NCPPB4381]
          Length = 403

 Score =  358 bits (919), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 98/412 (23%), Positives = 170/412 (41%), Gaps = 26/412 (6%)

Query: 12  LSERGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           L  RG   +I    +L++    G  +    G+D TA  LH GH   L  +   Q+ GH+ 
Sbjct: 10  LIGRGA-EEILKLDQLEVRLKSGMPLRVKAGFDPTAPDLHLGHTVLLNKMRQFQQLGHQV 68

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           I L+G  T +IGDPS ++ +R+ +  +++  N    +      +     +    +  N  
Sbjct: 69  IFLIGDFTGMIGDPSGKNATRKPLSREDVLANARTYEEQVFKILDRERTE----VRFNSE 124

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           W   +   D+++ + +  +V RML  +    R   +Q ++  EF Y ++Q YD V L  +
Sbjct: 125 WFGQMSAADMIK-LSAQHTVARMLERDDFAKRFGSQQPIAIHEFLYPLVQGYDSVALKAD 183

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNK 249
               +++GG+DQ  N++ G  L E         LT PLL    G  KM K+L   I +N+
Sbjct: 184 ----VELGGTDQKFNLLMGRGLQEHYGQAPQIVLTMPLLEGLDGVAKMSKSLGNYIGINE 239

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTT-LPMSE---IDRMAKLQGKEINEAKKIIATE 305
                 +       I D     +   L+  + ++E   +            E K  +A E
Sbjct: 240 PA---IDIVTKTMKIGDELTWRWIDLLSFDISVAEALRLKEQVVSGELHPREVKLRLARE 296

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           + T  H    AE+A             +  +P   I     + G+ + +L+  AG   S 
Sbjct: 297 LATRFHDAATAEQAIAGWHAVVTGQGDTSLLPLQEI--LVPAEGLRIASLLTTAGLTPSN 354

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           +EA R LK  A++I+  ++ +         F       +  GK+N     L 
Sbjct: 355 SEATRKLKERAVRIDGEVMEDASRV-----FTQGFEGLIQVGKRNFARVSLV 401


>gi|332527115|ref|ZP_08403194.1| tyrosyl-tRNA synthetase [Rubrivivax benzoatilyticus JA2]
 gi|332111545|gb|EGJ11527.1| tyrosyl-tRNA synthetase [Rubrivivax benzoatilyticus JA2]
          Length = 396

 Score =  358 bits (919), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 99/412 (24%), Positives = 175/412 (42%), Gaps = 30/412 (7%)

Query: 12  LSERGFIHQISNPRELDILCSQG----VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           +S RG    +     L  L         +   +G D TA  +H GH   L  +  LQ  G
Sbjct: 6   ISRRGCDELLPEADWLKKLARAEATGTPLRIKLGLDPTAPDIHIGHTVVLNKMRQLQDLG 65

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H  I L+G  TS+IGDPS R+ +R  +  ++I+ N +      S  +     +    +  
Sbjct: 66  HTVIFLIGDFTSMIGDPSGRNSTRPPLTREQIEANAQTYYKQASLVLDPARTE----IRY 121

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W  ++    ++ ++ + ++V RM+  +  + R +    +S  EF Y ++Q YD V L
Sbjct: 122 NSEWSDALGARGMI-QLAARYTVARMMERDDFKKRFESNTPISVHEFLYPLMQGYDSVAL 180

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIW 246
             +    L++GG+DQ  N++ G  L           LT PLL    G  KM K+    + 
Sbjct: 181 KSD----LELGGTDQKFNLLVGRALQAEYGQEPQCILTMPLLEGLDGVEKMSKSKGNYVG 236

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIAT 304
           + +        +    +I D  +  +   L+     EI   +     G+   +AK ++A 
Sbjct: 237 ITEPAN---AMFAKILSISDELMWRWYTLLSFRSEDEIAALKREVEGGRNPKDAKVMLAK 293

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           EITT  H    AE A           +    +P  S+S       +G+  L+ +AG   S
Sbjct: 294 EITTRFHSAAAAEAAHEDFQRRAAGGV-PDEIPECSLS----GAPLGIAALLKQAGLVPS 348

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           T+EA R ++   ++++  ++S++ L++        G   +  GK+      L
Sbjct: 349 TSEAMRMVEQGGVRVDGGVVSDKALKLAA------GTYVVQVGKRKFARVTL 394


>gi|317178865|dbj|BAJ56653.1| tyrosyl-tRNA synthetase [Helicobacter pylori F30]
          Length = 402

 Score =  357 bits (918), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 106/417 (25%), Positives = 193/417 (46%), Gaps = 36/417 (8%)

Query: 12  LSE--RGFIHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           L E  RG  ++I     ++ L  +            G+D TA  LH GH   +  L  LQ
Sbjct: 9   LKEIARGA-NEIIGLEYIEKLVRKYYETNERFIVKAGFDPTAPDLHLGHTVLIQKLALLQ 67

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + G +   L+G  T++IGDP+ ++E+R+ +  +++ EN +  +      +     +    
Sbjct: 68  QYGARVKFLIGDFTAMIGDPTGKNETRKPLNREQVLENAKTYEEQIYKILD----QKHTE 123

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           +  N TWL ++    ++ E+ + FSV RML  +    R K  + +S +EF Y +LQ YD 
Sbjct: 124 VCFNSTWLDTLGTKGII-ELCAKFSVARMLERDDFTKRYKENRPISIVEFLYPLLQGYDS 182

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASG-TKMGKTLS 242
           V +  +    +++GG+DQ  N++ G  L        +   +T PLL    G  KM K+L 
Sbjct: 183 VAMDAD----IELGGNDQKFNLLVGRFLQRAYGLNKEQSVITMPLLEGLDGVQKMSKSLG 238

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK---LQGKEINEAK 299
             + + +E   P   +    ++ D  +  +   L+   + EI+ +      Q       K
Sbjct: 239 NYVGITEE---PNAMFGKIMSVSDDLMWRYYTLLSAKTLEEIEDLKHGILNQTLHPKAVK 295

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKA 359
           + +A EI    +  E+A KA     + F  ++    +P I + + +   G+G+L ++ + 
Sbjct: 296 EDLAGEIVARYYDNEQAIKAKEQFSKVFSANL----LPEILL-ESDFDEGVGILDVLKQI 350

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           GF  ST++ARR ++   +KIN  +I NE  +         GN  +  GKK  +  ++
Sbjct: 351 GFCPSTSQARRDIQGGGVKINQKVIKNESYRFVK------GNYVIQLGKKRFMKLNI 401


>gi|31789364|gb|AAP58481.1| putative tyrosyl-tRNA synthetase [uncultured Acidobacteria
           bacterium]
          Length = 402

 Score =  357 bits (918), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 98/406 (24%), Positives = 174/406 (42%), Gaps = 32/406 (7%)

Query: 20  QISNPRELDILCS-----QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLM 74
            +  P EL             +   +G+D TA  LH GH+  +  +   Q  GH  I ++
Sbjct: 16  DVVRPGELRAKLELSQKTGRPLVVKVGFDPTAPDLHLGHVVLIRKMKHFQDLGHTVIYVV 75

Query: 75  GGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCS 134
           G  T++IGDP+ R ++R  +  +EI +N E  K      +     +   ++  N  WL  
Sbjct: 76  GAFTALIGDPTGRSKTRPPLTQEEIAQNAETYKTQIFKILD----REKTVVRFNSEWLEP 131

Query: 135 IKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCR 194
           +     ++ + + ++V +M+     ++R +  + ++  EF Y + QAYD V L  +    
Sbjct: 132 LGSFGWVK-LAARYNVAQMMERREFKARYESGKPIAVHEFLYPLAQAYDSVFLHAD---- 186

Query: 195 LQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTS 253
           +++GG+DQ  N+  G D+           +T+PLL    GT KM K+L   I + +E + 
Sbjct: 187 VELGGTDQLWNLNVGRDIMPSFGLEPQIVMTTPLLEGLDGTEKMSKSLGNYIGVTEEAS- 245

Query: 254 PYNFWQYWRNIDDADVVSFAKRLTTLPMSE---IDRMAKLQGKEINEAKKIIATEITTMV 310
               +    +I D  +  +   LT L  +E   +    +       +AK  +AT I T  
Sbjct: 246 --EMFGKLMSISDDLMWRYYLLLTDLTPAEVLGVRTRVESGTLHPKQAKVDLATRIVTDF 303

Query: 311 HGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARR 370
           HG E A +AA      F          TI +  ++ +    L   +V+ G A ST++ARR
Sbjct: 304 HGGETAARAADQFERRFTKKELPVDAATIELGDEDWNA--SLEKRLVRCGLAESTSDARR 361

Query: 371 HLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            ++   ++I+            +      G+  L  GK  H    +
Sbjct: 362 KIQQGGVRIDGQKAE-------VGSSAPAGDYLLQAGK--HAAVKV 398


>gi|169632044|ref|YP_001705780.1| tyrosyl-tRNA synthetase [Acinetobacter baumannii SDF]
 gi|169794220|ref|YP_001712013.1| tyrosyl-tRNA synthetase [Acinetobacter baumannii AYE]
 gi|169147147|emb|CAM85006.1| tyrosyl-tRNA synthetase [Acinetobacter baumannii AYE]
 gi|169150836|emb|CAO99439.1| tyrosyl-tRNA synthetase [Acinetobacter baumannii]
 gi|193075934|gb|ABO10511.2| tyrosyl-tRNA synthetase [Acinetobacter baumannii ATCC 17978]
          Length = 404

 Score =  357 bits (918), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 100/420 (23%), Positives = 177/420 (42%), Gaps = 28/420 (6%)

Query: 6   SDFL--SI---LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           S+FL       L +RG    IS    L  L     +    G+D TA  LH GH   +  L
Sbjct: 2   SNFLPAEEQLALIQRGTHEIISEEDLLKKLKENRPLKIKAGFDPTAPDLHLGHTVLINKL 61

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GH+   L+G  T++IGDP+ +  +R  +  ++++ N +  +      +     K
Sbjct: 62  KTFQDLGHEVTFLIGDYTAMIGDPTGKSATRPPLSREQVEANAKTYQEQVFKILDPNKTK 121

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N  W       DL+ ++ S  +V+RML  +    R    Q ++  EF Y ++Q
Sbjct: 122 ----VRFNSEWFNQKSAADLI-QLASQQTVSRMLERDDFTKRYNNHQPIAIHEFLYPLVQ 176

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGK 239
            YD + L    +  +++GG+DQ  N++ G  L  R        +T P+L    G  KM K
Sbjct: 177 GYDSIAL----EADVELGGTDQTFNLLMGRTLQSRYGQESQVCITVPILEGLDGVNKMSK 232

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINE 297
           +L   I +     +P   +Q   ++ D+ +  +   L+   + EI         G+   E
Sbjct: 233 SLGNYIGV---FDAPGAMYQKVLSMPDSLIERYFDLLSFKSLDEIKALLDEIAAGRNPQE 289

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K+I+A E+    H  E A  A  +A             P ++IS+ E    + + T++ 
Sbjct: 290 VKRILALELVERFHDAEAAANAHKSAGNRITEGEVPADTPEVTISRGEFGGEIFIATILR 349

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            AG   +   A+  +   A+K++ +++ +    +K       G   +  GKK   I  + 
Sbjct: 350 VAGLNPNAAAAKDAVARGAVKVDWNVV-DASFSVKE-----NGTFIIQSGKK--AIARVT 401


>gi|312128010|ref|YP_003992884.1| tyrosyl-tRNA synthetase [Caldicellulosiruptor hydrothermalis 108]
 gi|311778029|gb|ADQ07515.1| tyrosyl-tRNA synthetase [Caldicellulosiruptor hydrothermalis 108]
          Length = 396

 Score =  357 bits (918), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 105/406 (25%), Positives = 183/406 (45%), Gaps = 28/406 (6%)

Query: 16  GFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMG 75
           G    I+    ++ L     +   +G D     +H GH   L  L  LQ  GH  I ++G
Sbjct: 13  GAAEIITEEELVEKLKQDRPLNIKLGLDPNVPDVHLGHAVVLRKLKQLQDLGHNIILIIG 72

Query: 76  GGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSI 135
             T++IGDP+ + E+R+ +  +E+Q+N E  K      +          + +N  WL  +
Sbjct: 73  DFTAMIGDPTGKSETRKQLTKEEVQKNAEPFKQQVLKILD----PQKTTIRHNSEWLEPM 128

Query: 136 KYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRL 195
            ++D++  + S ++V RML  E+ R R+++   LS  EF Y ++Q YD V +    +  +
Sbjct: 129 NFLDVI-NLASKYTVARMLERETFRQRMEKNLPLSIHEFFYPLMQGYDSVVI----EADV 183

Query: 196 QMGGSDQWGNIICGIDLGERLKTPK-LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTS 253
           ++G ++Q  NI+ G  L +         AL  P+L    G  KM K+L   I +N+    
Sbjct: 184 ELGATEQKFNILMGRTLQKEYGCKTIQVALLMPILVGTDGVNKMSKSLGNYIGINE---P 240

Query: 254 PYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAKKIIATEITTMV 310
           P   +    +I D  ++S+ +  T L   EI+ + +   +      +AK  +A EI  + 
Sbjct: 241 PNVMYGKVMSIPDEIMISYYELTTDLEPEEIEEIKRKLEEGTLHPRDAKMRLAREIVKLY 300

Query: 311 HGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARR 370
           HG E A KA    +  F        +P + ++  +V     L   +V+    +ST+E  R
Sbjct: 301 HGEEAALKAEEEFIRVFQKKDVPDDIPEVELANVKV----YLPRFMVENKLCSSTSEGMR 356

Query: 371 HLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            +KS  +K+N   +S   ++ K  D        L  GK   +   L
Sbjct: 357 LIKSGGVKLNGQKVSELDIEFKDGD-------VLQVGKLKFVKIKL 395


>gi|154174441|ref|YP_001407884.1| tyrosyl-tRNA synthetase [Campylobacter curvus 525.92]
 gi|112803440|gb|EAU00784.1| tyrosyl-tRNA synthetase [Campylobacter curvus 525.92]
          Length = 401

 Score =  357 bits (918), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 101/423 (23%), Positives = 174/423 (41%), Gaps = 36/423 (8%)

Query: 7   DFLSILSE--RGFIHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLML 59
           D + I+ E  RG + ++ +   +  L               G+D TA  LH GH   L  
Sbjct: 3   DLMQIMQEVKRG-VAEMIDEDRIFNLIKNFYEKGENFYVKAGFDPTAPDLHLGHTVVLGK 61

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG 119
           +  LQK G     L+G  T  IGDPS +  +R+ +  Q + +N +  +      +     
Sbjct: 62  MALLQKHGAIVQFLIGDFTGQIGDPSGKSATRKKLDKQTVLKNAKTYEEQVFKILDPAKT 121

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
           K    ++ N TW   +    ++ E+ S F V RML  +    R+K    +S  EF Y ++
Sbjct: 122 K----IMFNSTWSNELGAAGMI-ELASTFPVARMLERDDFEKRIKAGTPISISEFLYPLM 176

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASGT-KM 237
           Q YD V +     C ++MGG+DQ  N++ G  L        +   +T PLL    G  KM
Sbjct: 177 QGYDSVAMK----CDIEMGGTDQKFNLLMGRTLQRIYNVGKEQAVITMPLLEGLDGVNKM 232

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---E 294
            K+L   I +     +P   +    +I D  +  +   L+     EI  +          
Sbjct: 233 SKSLGNYIGVT---DAPNEMFAKTLSISDELMWRWYDLLSEKSTGEIAALRASVDAGKYH 289

Query: 295 INEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLT 354
             +AK+ +A EIT   HG   A+ A+         +     + T  +S         ++ 
Sbjct: 290 PKKAKEDLAYEITARYHGEAAAKAASEEFNSVHVQNQIPSDLETFEMSS-----PAWIVE 344

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +       + ++ARR + +NA+ ++   I++E+L++       +G   L  GKK     
Sbjct: 345 ALTHCKLCPTNSQARRDIAANAVSVDQKKINDEQLKL------DSGIYVLQVGKKKFARL 398

Query: 415 HLC 417
            + 
Sbjct: 399 KVV 401


>gi|88797574|ref|ZP_01113163.1| tyrosyl-tRNA synthetase [Reinekea sp. MED297]
 gi|88779746|gb|EAR10932.1| tyrosyl-tRNA synthetase [Reinekea sp. MED297]
          Length = 411

 Score =  357 bits (918), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 103/411 (25%), Positives = 177/411 (43%), Gaps = 24/411 (5%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L+ L  RG    +     +  L S   +    G+D TA  LH GH   +  +   Q+ GH
Sbjct: 21  LAELR-RGTEEILLEDELVAKLKSGKKLRIKAGFDPTAPDLHLGHTVLINKMRQFQEMGH 79

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
             I L+G  T +IGDP+ +  +R  +  +EI+ N    K      +     +    +  N
Sbjct: 80  TVIFLIGDFTGLIGDPTGKSVTRPPLTEEEIEANALTYKEQVFKILDPEKTE----VRFN 135

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             W    K  D + ++    SV RML  +  + R K  QS+S  EF Y ++Q YD V L 
Sbjct: 136 SEWFAD-KGADFMIKLAGQLSVARMLERDDFKKRFKANQSISIHEFLYPLVQGYDSVALE 194

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWL 247
            ++    ++GG+DQ  N++ G +L +         + +PLL    G  KM K+L   + +
Sbjct: 195 ADF----ELGGTDQRFNLLMGRELQKGEGQEPQVVMMTPLLEGLDGVKKMSKSLGNYVGI 250

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATE 305
           N+   +P   +Q   +I D+ +  + + L+   + EI+++ +    G    + K  +A E
Sbjct: 251 NE---APGTMFQKIVSIPDSLIWRWYELLSFKTLEEIEQLKQQVESGGNPRDVKIELARE 307

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           I    HG E A  A   A          +  P + +S  E +  + +  +I KA  AT++
Sbjct: 308 IVARFHGDEAAATAHKGAGNIIQEGEVPEGTPEVVVSL-EGAEQLPIGAIINKANLATNS 366

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            +A+  LK+  +K+   ++               G   +  GKK      L
Sbjct: 367 AQAKDMLKNGRVKVEWDVVE-------PSLMLGPGRYLIQAGKKKIAWVVL 410


>gi|188527381|ref|YP_001910068.1| tyrosyl-tRNA synthetase [Helicobacter pylori Shi470]
 gi|188143621|gb|ACD48038.1| tyrosyl-tRNA synthetase [Helicobacter pylori Shi470]
          Length = 402

 Score =  357 bits (917), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 104/417 (24%), Positives = 193/417 (46%), Gaps = 36/417 (8%)

Query: 12  LSE--RGFIHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           L E  RG  ++I     ++ L  +            G+D TA  LH GH   +  L  LQ
Sbjct: 9   LKEIARGA-NEIIGLEYIEKLVRKYYETNERFIVKAGFDPTAPDLHLGHTVLIQKLALLQ 67

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + G +   L+G  T++IGDP+ ++E+R+ +  +++ EN +  +      +     +    
Sbjct: 68  QYGARVKFLIGDFTAMIGDPTGKNETRKPLNREQVLENAKTYEEQIYKILD----QKHTE 123

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           +  N TWL ++    ++ E+ + FSV RML  +    R K  + +S +EF Y +LQ YD 
Sbjct: 124 VCFNSTWLDALGAKGII-ELCAKFSVARMLERDDFTKRYKENRPISIVEFLYPLLQGYDS 182

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASG-TKMGKTLS 242
           V +  +    +++GG+DQ  N++ G  L        +   +T PLL    G  KM K+L 
Sbjct: 183 VAMDAD----IELGGNDQKFNLLVGRFLQRAYGLNKEQSVITMPLLEGLDGVQKMSKSLG 238

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK---LQGKEINEAK 299
             + + +E   P   +    ++ D  +  +   L+   + +I+ +      Q       K
Sbjct: 239 NYVGITEE---PNAMFGKIMSVSDDLMWRYYTLLSAKTLEKIEDLKHGILNQTLHPKAVK 295

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKA 359
           + +A EI    +  E+A KA     + F  ++    +P I + + +   G+G+L ++ + 
Sbjct: 296 EDLAGEIVARYYDNEQAIKAKEQFSKVFGANL----LPEILL-ESDFDEGVGILDVLKQI 350

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           GF  ST++ARR ++   +KIN  ++ NE  +         GN  +  GKK  +  ++
Sbjct: 351 GFCPSTSQARRDIQGGGVKINQEVVKNENYRFVK------GNYVIQLGKKRFMKLNI 401


>gi|296272457|ref|YP_003655088.1| tyrosyl-tRNA synthetase [Arcobacter nitrofigilis DSM 7299]
 gi|296096631|gb|ADG92581.1| tyrosyl-tRNA synthetase [Arcobacter nitrofigilis DSM 7299]
          Length = 402

 Score =  357 bits (917), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 103/424 (24%), Positives = 174/424 (41%), Gaps = 35/424 (8%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLT 55
           M     + L+ +  RG    I +   ++ L               G+D TA  LH GH  
Sbjct: 1   MENKIKEALAEIQ-RGSFE-IIDIESIEKLLKNYYEKGENFYVKAGFDPTAPDLHLGHTV 58

Query: 56  QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK 115
            L  L   QK G     L+G  T+ IGDP+ + E+R+++  Q++ +N +  K      + 
Sbjct: 59  LLQKLSVFQKFGGIVQFLIGDFTASIGDPTGKSETRKVLSKQQVLDNAQSYKNQVFKILD 118

Query: 116 YGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFN 175
               +T   ++ N  WL  +    L+  + S  +V RML  +    R      ++  EF 
Sbjct: 119 ----ETKTEVVFNSNWLNDLGAAGLI-NLASNLTVARMLERDDFSKRYASNTPIAVSEFT 173

Query: 176 YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASG 234
           Y +LQ YD V L  +    +++GG+DQ  N++ G  L +      +   L  P+L    G
Sbjct: 174 YPLLQGYDSVFLKSD----IELGGTDQKFNLLMGRTLQKAYNIGKQQAVLMMPILEGLDG 229

Query: 235 -TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK 293
             KM K+L+  I +  E     N +    +I D  +  F + L++  + E+  + +   K
Sbjct: 230 VQKMSKSLNNYIGVTDEAN---NMFGKVLSISDELMWRFYELLSSKSLKEVKELHEGVQK 286

Query: 294 ---EINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGM 350
                   K  +A E+    HG     KA     + F        +    +  D      
Sbjct: 287 GTIHPKAVKDSLAIELVDRYHGEGAGLKAQEEFKKVFAKKDIPSDIAEFELKAD-----T 341

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            +   +V     +ST++ARR +K+ A+KIN   I ++KL +        G   L  GKK+
Sbjct: 342 WICQALVDTNLVSSTSQARRDIKAGAVKINQEKIDDDKLNLSK------GEYILQKGKKS 395

Query: 411 HIIC 414
               
Sbjct: 396 FAKI 399


>gi|332295722|ref|YP_004437645.1| Tyrosyl-tRNA synthetase [Thermodesulfobium narugense DSM 14796]
 gi|332178825|gb|AEE14514.1| Tyrosyl-tRNA synthetase [Thermodesulfobium narugense DSM 14796]
          Length = 393

 Score =  357 bits (917), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 110/405 (27%), Positives = 186/405 (45%), Gaps = 21/405 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG    I        + S   +   +G D TA  LH GH   L  L   Q  GH  I
Sbjct: 9   LITRGTEEIIPLEDLEKKIKSGRKLNIKLGIDPTAPDLHLGHTVVLRKLKNFQDLGHNVI 68

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            ++G  T++IGDP+ + ++R  + + EI++N +  K      +     +   ++  N  W
Sbjct: 69  LIIGDFTTLIGDPTGKSKTRPALSADEIKKNAQTYKTQAFKILD----EKKTIIKYNSEW 124

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L  I   +L++ I + F+V R+L  E+   RLK  +++S  E  Y +LQAYD V +  + 
Sbjct: 125 LSKISLEELIK-ISAKFTVARILERETFSQRLKTNEAISLHEILYPLLQAYDSVAIKAD- 182

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G DL E++       LT P++    G  KM K+L   + + ++
Sbjct: 183 ---VELGGTDQTFNLLIGRDLMEKMGMEPQVCLTMPIIAGLDGKQKMSKSLGNYVGIAED 239

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMV 310
              P + +    +I D  +  +   LT     EI    +   K   + KKI+A EIT M 
Sbjct: 240 ---PKDIFGKLMSIPDELLRQYFILLTDFKEDEISGFFERY-KNPKDIKKILAFEITKMY 295

Query: 311 HGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARR 370
              EEA KA  +    F+     +  P       E    + L  L+V  G   S++E +R
Sbjct: 296 SSEEEALKAKESFETAFEKRTFPKDAPVYKWPY-ENENEVWLPKLLVDLGLLKSSSEGKR 354

Query: 371 HLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            +   AI+++   +++EK  +K  D       +L  G+K  +  +
Sbjct: 355 LISQGAIEVDEETVTDEKFVVKKGDH------RLKVGRKMFLRIY 393


>gi|322506181|gb|ADX01635.1| Tyrosyl-tRNA synthetase [Acinetobacter baumannii 1656-2]
          Length = 410

 Score =  357 bits (917), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 99/420 (23%), Positives = 176/420 (41%), Gaps = 28/420 (6%)

Query: 6   SDFL--SI---LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           S+FL       L +RG    IS    L  L     +    G+D TA  LH GH   +  L
Sbjct: 8   SNFLPAEEQLALIQRGTHEIISEEDLLKKLKENRPLKIKAGFDPTAPDLHLGHTVLINKL 67

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GH+   L+G  T++IGDP+ +  +R  +  ++++ N +  +      +     K
Sbjct: 68  KTFQDLGHEVTFLIGDYTAMIGDPTGKSATRPPLSREQVEANAKTYQEQVFKILDPNKTK 127

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N  W       DL+ ++ S  +V+RML  +    R    Q ++  EF Y ++Q
Sbjct: 128 ----VRFNSEWFNQKSAADLI-QLASQQTVSRMLERDDFTKRYNNHQPIAIHEFLYPLVQ 182

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGK 239
            YD + L    +  +++GG+DQ  N++ G  L  R        +T P+L    G  KM K
Sbjct: 183 GYDSIAL----EADVELGGTDQTFNLLMGRTLQSRYGQESQVCITVPILEGLDGVNKMSK 238

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINE 297
           +L   I +     +P   +Q   ++ D+ +  +   L+   + EI         G+   E
Sbjct: 239 SLGNYIGV---FDAPGAMYQKVLSMPDSLIERYFDLLSFKSLDEIKALLDEIAAGRNPQE 295

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K+I+A E+    H  E A  A  +A             P ++IS+ E    + + T++ 
Sbjct: 296 VKRILALELVERFHDAEAAANAHKSAGNRITEGEVPADTPEVTISRGEFGGEIFIATILR 355

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            AG   +   A+  +   A+K++ +++ +    +K           +  GKK   I  + 
Sbjct: 356 VAGLNPNAAAAKDAVARGAVKVDWNVV-DASFSVKE-----NRTFIIQSGKK--AIARVT 407


>gi|193216674|ref|YP_001999916.1| tyrosyl tRNA synthetase [Mycoplasma arthritidis 158L3-1]
 gi|193001997|gb|ACF07212.1| tyrosyl tRNA synthetase [Mycoplasma arthritidis 158L3-1]
          Length = 411

 Score =  357 bits (916), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 133/419 (31%), Positives = 210/419 (50%), Gaps = 23/419 (5%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
            + +  L  RG    IS+  + + L  +  V  Y G+D TA SLH G+  Q++ L   +K
Sbjct: 3   KNLIVELKNRGIFSNISSEEKFNAL--ESNVGVYTGFDPTAKSLHLGNYVQIVNLLRFKK 60

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            G KP++++GG T +IGDPS+R   R+++  + I  N   IK     F           +
Sbjct: 61  FGFKPLAVLGGLTGMIGDPSYRQAERKLLDEKTILANKNAIKKQLERF--------GLTI 112

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
            +N         +D LR++G   ++N +LS ES+ +RL  E+ LSFLEF+Y ++Q +DF 
Sbjct: 113 FDNFAIYKDWSMLDFLRKLGPLVNINYLLSKESIATRL--EKGLSFLEFSYQLIQGWDFK 170

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKT-LS 242
            L +N + ++Q+GGSDQWGNI  G+++  +L        A+T+ LL   SG K GK+   
Sbjct: 171 YLYENQNVKIQLGGSDQWGNITTGLEIIRKLHGEGSTAVAITANLLLDESGKKFGKSTGG 230

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKK 300
           G++WL+KEMTSP+  +Q+  N  D  V  +   LT L   EI +        K    A+K
Sbjct: 231 GSLWLDKEMTSPFAIYQFLLNRSDEKVEEYLNWLTFLSQEEIKKVIDQAKNNKAARLAQK 290

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQH-----MPTISISKDEVSRGMGLLTL 355
            +A E+   +H +E AE+    +   F  S +        M   ++ + E+      +  
Sbjct: 291 ALAYEVVKDIHSQEIAEQCIKISDILFAKSNNGLTKNDLVMLRGTLPEYEIKPNQKFIEA 350

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           I  +G  TS  E R  ++  +  I+  ++ NE   I   +FDS     L  GKK  II 
Sbjct: 351 IKASGICTSNREIREFVQKKSFAIDGVVVDNENQIISFNNFDSE-FALLKKGKKEFIIL 408


>gi|110833227|ref|YP_692086.1| tyrosine-tRNA ligase [Alcanivorax borkumensis SK2]
 gi|110646338|emb|CAL15814.1| tyrosine-tRNA ligase [Alcanivorax borkumensis SK2]
          Length = 399

 Score =  357 bits (916), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 93/408 (22%), Positives = 171/408 (41%), Gaps = 22/408 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG    I        L     +    G+D TA  LH GH   +  L   Q+ GH+ I
Sbjct: 10  LITRGADEIIQQEELRKKLALGRPLRVKAGFDPTAPDLHLGHTVLINKLRQFQELGHEVI 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T +IGDP+ +  +R  +  +++  N +  K      +     ++   +  N +W
Sbjct: 70  FLIGDFTGMIGDPTGKSATRPPLSREDVLRNADTYKEQVFKILD----ESKTRVEFNSSW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           + +I    +++  G + +V RML  +    R K  Q ++  EF Y ++Q YD V L    
Sbjct: 126 MNTIGAAGMIKLAGQY-TVARMLERDDFDKRYKGNQPIAIHEFLYPLVQGYDSVAL---- 180

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKE 250
           +  +++GG+DQ  N++ G  L +         LT P+L    G  KM K+L   + +N  
Sbjct: 181 EADVELGGTDQKFNLLMGRTLQKTYGQSPQICLTMPILEGLDGVQKMSKSLGNYVGVN-- 238

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINEAKKIIATEITT 308
             +P   ++   ++ D+    + + L+      I+ +           EAKK  A E+  
Sbjct: 239 -DAPGEMYRKLLSLPDSLTWRYYELLSACSNERIEALKAEAVALGSPQEAKKAFALEMVE 297

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
             HG E A+ A  +A     +     ++P + +   E    + +L L+ +AG   +   A
Sbjct: 298 RFHGVEAAQAAPKSAGNQIALGHIPDNVPEVEVDIGE-QESIHILPLLREAGLVQNGKAA 356

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +      A+ ++ + ++ E        F    +  +  GKK      +
Sbjct: 357 KDVFGRGAVYLDGAQLNEE------ASFSRGDSHVIQAGKKKIARVTI 398


>gi|210631213|ref|ZP_03296803.1| hypothetical protein COLSTE_00688 [Collinsella stercoris DSM 13279]
 gi|210160124|gb|EEA91095.1| hypothetical protein COLSTE_00688 [Collinsella stercoris DSM 13279]
          Length = 404

 Score =  357 bits (916), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 94/402 (23%), Positives = 173/402 (43%), Gaps = 20/402 (4%)

Query: 19  HQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGG 77
            +I    +L     +G  +   +G D T+  LH GH   L  +   Q  GH+   ++G G
Sbjct: 16  AKIVPEADLKKKLERGVPLNIKLGVDPTSPDLHLGHAVPLRKMRQFQDLGHRVTLIIGNG 75

Query: 78  TSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKY 137
           T+ IGDPS ++ +R  +  +E++ N           +          +++N  W+  +  
Sbjct: 76  TATIGDPSGKNSTRPQLTQEEVEANAATYVAQAMKILD----PEKTTIVHNGDWMFPMGL 131

Query: 138 IDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQM 197
            +LL  I S F+V R+L  +    R + +  ++  EF Y I+QAYD V++    +  ++M
Sbjct: 132 AELL-SIASKFTVARILERDDFTKRYQSQTPIALHEFLYPIMQAYDSVKI----EADVEM 186

Query: 198 GGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYN 256
           GG+DQ  N++ G +L E++      ALT PLL    GT KM K+    I L  E   P +
Sbjct: 187 GGNDQLFNLLAGRELMEKMGMEPQIALTMPLLEGTDGTRKMSKSYGNYIGLTDE---PAD 243

Query: 257 FWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG---KEINEAKKIIATEITTMVHGR 313
            +    +I D  +  + +  ++L   E+D++            E K+ +  ++ T  H  
Sbjct: 244 MFGKTMSIPDEMIGKYYRLASSLSPEEVDKIDAALADGSANPYELKRALGRDLVTTYHSA 303

Query: 314 EEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGM-GLLTLIVKAGFATSTNEARRHL 372
           E A  A     +          +  +++       G+  L  ++  AG A S  +ARR +
Sbjct: 304 EAAVAAEAEFDQVHKNREMPSDIAEVAVEIVVNDEGLVYLPAVLQAAGLAPSAGQARRDI 363

Query: 373 KSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
               +K++   ++ +   +            L  GK++    
Sbjct: 364 DGGGVKLDGEAVAPKAYNVDPAALKPG--TVLQVGKRHFARL 403


>gi|170078217|ref|YP_001734855.1| tyrosyl-tRNA synthetase [Synechococcus sp. PCC 7002]
 gi|169885886|gb|ACA99599.1| tyrosyl-tRNA synthetase [Synechococcus sp. PCC 7002]
          Length = 391

 Score =  357 bits (916), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 92/395 (23%), Positives = 168/395 (42%), Gaps = 28/395 (7%)

Query: 23  NPRELDILCSQG--VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSI 80
               L  +   G   +   +G D T S LH GH      L   Q  GH  + ++G  T+ 
Sbjct: 20  PEENLAQVLQTGDRPLRVKLGVDPTGSDLHLGHSIPFRKLRAFQDAGHTAVVIIGDFTAQ 79

Query: 81  IGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDL 140
           IGDP+ + E R+ + + ++Q+N E         + + T      +  N  WL  +     
Sbjct: 80  IGDPTGKSEVRKQLSAADVQQNAETYLEQLRPILDFETP-GRLEIRYNSEWLKDLDLAK- 137

Query: 141 LREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGS 200
           ++ + +  +V +ML+ E    R + E  +   EF Y ++Q YD V +  +    +++GG+
Sbjct: 138 IQALLATMTVQQMLAKEGFAKRYQSENPIYIHEFLYPLMQGYDSVAVDAD----VELGGT 193

Query: 201 DQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQ 259
           DQ  NI  G DL         F L  P+L    G  KM K+L+  + L     + +  +Q
Sbjct: 194 DQKFNIAVGRDLQRHFGKKPQFGLLLPILIGTDGKEKMSKSLNNYVGL---KDNHHTMYQ 250

Query: 260 YWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKA 319
             +N  D+ +  + + LT        +  +       + +K++A +I T  HG E A  A
Sbjct: 251 KLQNTPDSLLKDYFELLT-------KQDLQTLPTNPRDQQKLLARDIVTQFHGAEAAVDA 303

Query: 320 ATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKI 379
             A  +       + ++P  S+   E      L  ++  +G  +S  + RR +K  A+++
Sbjct: 304 EKAVQDV-----AAANIPEFSLGAVEFPS--PLFYILGASGLCSSGGDGRRQIKGGAVRL 356

Query: 380 NNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           ++  I++  L  +  +        L  GKK  +  
Sbjct: 357 DDERITDMNLAFEKPEQLVDK--VLRVGKKKFVRL 389


>gi|327296445|ref|XP_003232917.1| tyrosyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
 gi|326465228|gb|EGD90681.1| tyrosyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
          Length = 597

 Score =  357 bits (916), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 131/489 (26%), Positives = 203/489 (41%), Gaps = 78/489 (15%)

Query: 5   KSDFLSILSERGFIHQIS--NPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
           +  FLS + ERG IH +   +   LD L +   V  Y G D TA S+H GH+   M+L W
Sbjct: 20  RQSFLSFMEERGLIHSVIGGDRDALDKLITNKRVGLYAGIDPTAPSMHVGHMLPFMILGW 79

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSF--------I 114
               G K + L+GG TS +GDP+ R  +R ++ +   +  I  +                
Sbjct: 80  AYVHGMKSVWLLGGSTSRVGDPTGRTTARPVLSNASRKAYIANMHMQLKKLGASFERYGG 139

Query: 115 KYGTGKTDALML---NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSF 171
           K+G     A      NN TW      ID+L  +G    +  ML  E V++RL+    +SF
Sbjct: 140 KHGYSWEWAWRRALENNNTWWNKETLIDVLGTLGQHARIGTMLGREPVKTRLESGSGMSF 199

Query: 172 LEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL------KTPK----- 220
            EF Y I+QA+D+  L +     +Q+GGSDQ GNI  GID  +++      +T       
Sbjct: 200 TEFCYPIMQAWDWWHLYQK-GVMIQVGGSDQSGNIQFGIDTIKQVLKTSPIETKPGEDPD 258

Query: 221 ---LFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT 277
               F LT PLLTT++G K+GK+   +IWL+K+MTS Y+ +QY+    D D+       T
Sbjct: 259 LSMPFGLTVPLLTTSTGEKIGKSAGNSIWLDKDMTSTYDLYQYFMRQPDQDMERLLNMFT 318

Query: 278 TLPMSEIDRMAKLQGKEI--NEAKKIIATEITTMVHGREEAEKAATAAMECFDMS----- 330
            LP S I  + +   K      A+  +A E   +VHG +EAE+A+ A    F        
Sbjct: 319 FLPTSRIPEIIEEHNKAPSRRVAQHTLAQEFVELVHGPKEAEEASKAHKAIFQPQGSAST 378

Query: 331 --------IHSQHMPT---------------ISISKDEVSRGMGLL------TLIVKAGF 361
                   +    +P                 +     +     L+       ++  AG 
Sbjct: 379 KSDSKSIPLLPSGIPEFINAGVNKKAPQMNAFTAPTHHLVLPRSLVVGQYFHKILYSAGM 438

Query: 362 ATSTNEARRHLKSNAIKI-----NNSIISNE---------KLQIKLQDFDSTGNIKLSFG 407
            +S  E  R + +N   +         + +             +  +       + L  G
Sbjct: 439 VSSKQEGHRIIVNNGASVGCMPSGAEQMGDALSYVPLRTWPADVTEKFLIDGSLLILRIG 498

Query: 408 KKNHIICHL 416
           K    I  +
Sbjct: 499 KWRVKIIKV 507


>gi|148989919|ref|ZP_01821202.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae SP6-BS73]
 gi|147924704|gb|EDK75789.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae SP6-BS73]
          Length = 324

 Score =  357 bits (916), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 112/320 (35%), Positives = 173/320 (54%), Gaps = 17/320 (5%)

Query: 107 KGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE 166
           K  F  F  +  G+  A+M+NN  W  SI +ID LR+IG +F+VN M+S ESV+ R+  E
Sbjct: 8   KDNFLVFFDFENGENKAVMVNNYDWFGSISFIDFLRDIGKYFTVNYMMSKESVKKRI--E 65

Query: 167 QSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTS 226
             +S+ EF Y I+Q YDF  L ++++  LQ+GGSDQWGN+  G +L  R        +T 
Sbjct: 66  TGISYTEFAYQIMQGYDFFVLNQDHNVTLQIGGSDQWGNMTAGTELLRRKADKTGHVITV 125

Query: 227 PLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR 286
           PL+T A+G K GK+   A+WLN E TSPY  +Q+W N+ DAD V F K  T L + EI+ 
Sbjct: 126 PLITDATGKKFGKSEGNAVWLNPEKTSPYEMYQFWMNVMDADAVRFLKIFTFLSLDEIED 185

Query: 287 MAKLQGKEINE--AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS----------Q 334
           + K      +E  A+K++A E+ T+VHG E  ++A     + F  +I +          +
Sbjct: 186 IRKQFEAAPHERLAQKVLAREVVTLVHGEEAYKEALNITEQLFAGNIKNLSVKELKQGLR 245

Query: 335 HMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
            +P   +  DE +    ++ L+V +G   S  +AR  +++ AI +N   I +    +   
Sbjct: 246 GVPNYQVQADENN---NIVELLVSSGIVNSKRQAREDVQNGAIYVNGDRIQDLDYVLSDA 302

Query: 395 DFDSTGNIKLSFGKKNHIIC 414
           D        +  GKK + + 
Sbjct: 303 DKLENELTVIRRGKKKYFVL 322


>gi|262281575|ref|ZP_06059354.1| tyrosyl-tRNA synthetase [Acinetobacter calcoaceticus RUH2202]
 gi|262257034|gb|EEY75773.1| tyrosyl-tRNA synthetase [Acinetobacter calcoaceticus RUH2202]
          Length = 410

 Score =  356 bits (915), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 100/420 (23%), Positives = 177/420 (42%), Gaps = 28/420 (6%)

Query: 6   SDFL--SI---LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           S+FL       L +RG    IS    L  L     +    G+D TA  LH GH   +  L
Sbjct: 8   SNFLPAEEQLALIQRGTHEIISEEDLLKKLKENRPLKIKAGFDPTAPDLHLGHTVLINKL 67

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GH+   L+G  T++IGDP+ +  +R  +  ++++ N +  +      +     K
Sbjct: 68  KTFQDLGHEVTFLIGDYTAMIGDPTGKSATRPPLSREQVEANAKTYQEQVFKILDPNKTK 127

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N  W       DL+ ++ S  +V+RML  +    R    Q ++  EF Y ++Q
Sbjct: 128 ----VRFNSEWFNQKSAADLI-QLASQQTVSRMLERDDFTKRYSNHQPIAIHEFLYPLVQ 182

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGK 239
            YD + L    +  +++GG+DQ  N++ G  L  R        +T P+L    G  KM K
Sbjct: 183 GYDSIAL----EADVELGGTDQTFNLLMGRTLQSRYGQESQVCITVPILEGLDGVNKMSK 238

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINE 297
           +L   I +     +P   +Q   ++ D+ +  +   L+   + EI         G+   E
Sbjct: 239 SLGNYIGV---FDTPGAMYQKVLSMPDSLIERYFDLLSFKSLDEIKTLLDEIAAGRNPQE 295

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K+I+A E+    H  E A  A  +A          +  P ++IS+ E    + + T++ 
Sbjct: 296 VKRILALELVERFHDAEAAANAHKSAGNLITEGEVPEDTPEMTISRGEFGGEIFIATILR 355

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            AG   +   A+  +   A+K++ + + +    +K       G   +  GKK   I  + 
Sbjct: 356 LAGLNPNAAAAKDAVARGAVKVDWNAV-DASFSVKE-----NGTFIIQSGKK--AIARVT 407


>gi|325123508|gb|ADY83031.1| tyrosyl-tRNA synthetase [Acinetobacter calcoaceticus PHEA-2]
          Length = 410

 Score =  356 bits (915), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 99/417 (23%), Positives = 175/417 (41%), Gaps = 26/417 (6%)

Query: 6   SDFL--SI---LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           S+FL       L +RG    IS    L  L     +    G+D TA  LH GH   +  L
Sbjct: 8   SNFLPAEEQLALIQRGTHEIISEEDLLKKLKENRPLKIKAGFDPTAPDLHLGHTVLINKL 67

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GH+   L+G  T++IGDP+ +  +R  +  ++++ N +  +      +     K
Sbjct: 68  KTFQDLGHEVTFLIGDYTAMIGDPTGKSATRPPLSREQVEANAKTYQEQVFKILDPNKTK 127

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N  W       DL+ ++ S  +V+RML  +    R    Q ++  EF Y ++Q
Sbjct: 128 ----VRFNSEWFNQKSAADLI-QLASQQTVSRMLERDDFTKRYSNHQPIAIHEFLYPLVQ 182

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGK 239
            YD + L    +  +++GG+DQ  N++ G  L  R        +T P+L    G  KM K
Sbjct: 183 GYDSIAL----EADVELGGTDQTFNLLMGRTLQSRYGQESQVCITVPILEGLDGVNKMSK 238

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINE 297
           +L   I +     +P   +Q   ++ D+ +  +   L+   + EI         G+   E
Sbjct: 239 SLGNYIGV---FDTPGAMYQKVLSMPDSLIERYFDLLSFKSLDEIKALLDEIAAGRNPQE 295

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K+I+A E+    H  E A  A  +A          +  P ++IS  E    + + T++ 
Sbjct: 296 VKRILALELVERFHDAEAAANAHKSAGNRITEGEVPEDTPEVTISLGEFGGEIFIATILR 355

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            AG   +   A+  +   A+K++ + + +    +K       G+  +  GKK     
Sbjct: 356 VAGLNPNAAAAKDAVARGAVKVDWNAV-DASFSVKE-----NGSFIIQSGKKAIARV 406


>gi|152990508|ref|YP_001356230.1| tyrosyl-tRNA synthetase [Nitratiruptor sp. SB155-2]
 gi|151422369|dbj|BAF69873.1| tyrosyl-tRNA synthetase [Nitratiruptor sp. SB155-2]
          Length = 399

 Score =  356 bits (915), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 105/411 (25%), Positives = 182/411 (44%), Gaps = 32/411 (7%)

Query: 15  RG---FIHQISNPRELDILCSQGV-VTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           RG    I Q      L      G       G+D TA  LH GH   L  L   QK G   
Sbjct: 11  RGTAEIIDQERIETLLKEYIEHGKNYYVKAGFDPTAPDLHLGHTVLLQKLATFQKYGGIV 70

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
             ++G  T++IGDP+ + E+R+ +  + + +N +  K      +     +    ++ N +
Sbjct: 71  QFIIGDFTAMIGDPTGKSETRKKLDRETVLKNAQSYKDQVFKVLNPAKTE----VVFNSS 126

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           WL ++     L E+ + FSV RML  +    R K  + ++  EF Y +LQ YD V L  +
Sbjct: 127 WLDALGASG-LVELTTLFSVARMLERDDFEKRYKAGRPIAISEFIYPLLQGYDSVHLKSD 185

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASG-TKMGKTLSGAIWLN 248
               +++GG+DQ  N++ G  L        +   L  P+L    G  KM K+L   + + 
Sbjct: 186 ----IEIGGTDQKFNLLMGRHLQRSFGIGKEQAVLMMPILEGLDGVQKMSKSLGNYVGVT 241

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAKKIIATE 305
           +E   P   +    +I D  +  + + L++  + EI  + +   K        K+++A E
Sbjct: 242 EE---PNEMFAKLMSISDELMWRYYELLSSKSLEEIQTLKEGVEKGEIHPKFVKELLAME 298

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           I    H  E     A AA E FD       +PT  I + E+   + +   +V+AG   ST
Sbjct: 299 IVERYHDAEA----AKAAKEEFDRVHKKNDIPT-DIKEVEMQGPVWIAKALVEAGLEPST 353

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           ++ARR +++ A+++N   I+++   ++      TG   +  GK+      +
Sbjct: 354 SQARRDIQAGAVRVNKEKITDKDFHLQ------TGEYIVQVGKRKFAKVKV 398


>gi|326473229|gb|EGD97238.1| tyrosyl-tRNA synthetase [Trichophyton tonsurans CBS 112818]
 gi|326477691|gb|EGE01701.1| tyrosyl-tRNA synthetase [Trichophyton equinum CBS 127.97]
          Length = 597

 Score =  356 bits (914), Expect = 4e-96,   Method: Composition-based stats.
 Identities = 131/489 (26%), Positives = 205/489 (41%), Gaps = 78/489 (15%)

Query: 5   KSDFLSILSERGFIHQIS--NPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
           +  FLS++ ERG IH +   +   LD + +   V  Y G D TA S+H GH+   M+L W
Sbjct: 20  RQSFLSLMEERGLIHSVIGGDRDALDKMITNKRVGLYAGIDPTAPSMHVGHMLPFMILGW 79

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSF--------I 114
               G K + L+GG TS +GDP+ R  +R ++ +   +  I  +                
Sbjct: 80  AYVHGMKSVWLLGGSTSRVGDPTGRTTARPVLSNASRKAYIANMHMQLKKLGASFERYGG 139

Query: 115 KYGTGKTDALML---NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSF 171
           K+G     A      NN TW      ID+L  +G    +  ML  E V++RL+    +SF
Sbjct: 140 KHGYSWEWAWRRALENNNTWWNKETLIDVLAILGQHARIGTMLGREPVKTRLESGSGMSF 199

Query: 172 LEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL------KTPK----- 220
            EF Y I+QA+D+  L +     +Q+GGSDQ GNI  GID  +++      +T       
Sbjct: 200 TEFCYPIMQAWDWWHLYQK-GVMIQVGGSDQSGNIQFGIDTIKQVLKTSPIETKPGEDPE 258

Query: 221 ---LFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT 277
               F LT PLLTT++G K+GK+   +IWL+K+MTS Y+ +QY+    D D+    K  T
Sbjct: 259 LSMPFGLTVPLLTTSTGEKIGKSAGNSIWLDKDMTSTYDLYQYFMRQPDQDMERLLKMFT 318

Query: 278 TLPMSEIDRMAKLQGKEI--NEAKKIIATEITTMVHGREEAEKAATAAMECFDMS----- 330
            LP S I  + +   K      A+  +A E   +VHG +EAE+A+ A    F        
Sbjct: 319 FLPTSRIPEIIEEHNKAPSRRVAQHTLAQEFVELVHGPKEAEEASKAHKAIFQPQGSAST 378

Query: 331 --------IHSQHMPT---------------ISISKDEVSRGMGLL------TLIVKAGF 361
                   +    +P                 +     +     L+       ++  AG 
Sbjct: 379 KSDSKSIPLSPSGIPEFINAGVNKKAPQMNAFTAPTHHLVLPRSLVVGQYFHKILYSAGM 438

Query: 362 ATSTNEARRHLKSNAIKI-----NNSIISNE---------KLQIKLQDFDSTGNIKLSFG 407
            +S  E  R + +N   +         + +             +  +       + L  G
Sbjct: 439 VSSKQEGHRIIVNNGASVGCMPSGAEQMGDALSYVPLRTWPADVTEKFLIDGSLLILRIG 498

Query: 408 KKNHIICHL 416
           K    I  +
Sbjct: 499 KWRVKIIKV 507


>gi|293611371|ref|ZP_06693667.1| tyrosyl-tRNA synthetase [Acinetobacter sp. SH024]
 gi|292826243|gb|EFF84612.1| tyrosyl-tRNA synthetase [Acinetobacter sp. SH024]
          Length = 404

 Score =  356 bits (914), Expect = 4e-96,   Method: Composition-based stats.
 Identities = 99/417 (23%), Positives = 175/417 (41%), Gaps = 26/417 (6%)

Query: 6   SDFL--SI---LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           S+FL       L +RG    IS    L  L     +    G+D TA  LH GH   +  L
Sbjct: 2   SNFLPAEEQLALIQRGTHEIISEEDLLKKLKENRPLKIKAGFDPTAPDLHLGHTVLINKL 61

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GH+   L+G  T++IGDP+ +  +R  +  ++++ N +  +      +     K
Sbjct: 62  KTFQDLGHEVTFLIGDYTAMIGDPTGKSATRPPLSREQVEANAKTYQEQVFKILDPNKTK 121

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N  W       DL+ ++ S  +V+RML  +    R    Q ++  EF Y ++Q
Sbjct: 122 ----VRFNSEWFNQKSAADLI-QLASQQTVSRMLERDDFTKRYSNHQPIAIHEFLYPLVQ 176

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGK 239
            YD + L    +  +++GG+DQ  N++ G  L  R        +T P+L    G  KM K
Sbjct: 177 GYDSIAL----EADVELGGTDQTFNLLMGRTLQSRYGQESQVCITVPILEGLDGVNKMSK 232

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINE 297
           +L   I +     +P   +Q   ++ D+ +  +   L+   + EI         G+   E
Sbjct: 233 SLGNYIGV---FDTPGAMYQKVLSMPDSLIERYFDLLSFKSLDEIKALLDEIAAGRNPQE 289

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K+I+A E+    H  E A  A  +A          +  P ++IS  E    + + T++ 
Sbjct: 290 VKRILALELVERFHDAEAAANAHKSAGNRITEGEVPEDTPEVTISLGEFGGEIFIATILR 349

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            AG   +   A+  +   A+K++ + + +    +K       G+  +  GKK     
Sbjct: 350 VAGLNPNAAAAKDAVARGAVKVDWNAV-DASFSVKE-----NGSFIIQSGKKAIARV 400


>gi|118474811|ref|YP_892369.1| tyrosyl-tRNA synthetase [Campylobacter fetus subsp. fetus 82-40]
 gi|118414037|gb|ABK82457.1| tyrosyl-tRNA synthetase [Campylobacter fetus subsp. fetus 82-40]
          Length = 402

 Score =  356 bits (914), Expect = 4e-96,   Method: Composition-based stats.
 Identities = 111/423 (26%), Positives = 183/423 (43%), Gaps = 35/423 (8%)

Query: 6   SDFLSILSE--RGFIHQISNPRELDILCS---QGVVTAYI--GYDLTASSLHAGHLTQLM 58
           ++  SI+ E  +G + +I +   +  L     +     YI  G+D TA  LH GH   L 
Sbjct: 2   NNIDSIMQEIKKG-VAEIIDFSRIKSLIKNYYENGKNFYIKAGFDPTAPDLHLGHTVVLN 60

Query: 59  LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT 118
            +  LQK G     L+G  T+ IGDPS +  +R+++    I +N +  K      +    
Sbjct: 61  KMRLLQKHGGIVQFLIGDFTAKIGDPSGKSATRKVLDDDTIAKNAKTYKEQVFKILD--- 117

Query: 119 GKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMI 178
            ++   ++ N  WL  +   D L  + S F+V RML  +    R K E  ++  EF Y +
Sbjct: 118 -ESKTEVMFNSAWLSKLG-ADGLIALASTFNVARMLERDDFTKRYKNETPIAISEFLYPL 175

Query: 179 LQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASGT-K 236
           LQ YD V +     C ++MGG+DQ  N++ G  LG       +   +  PLL    G  K
Sbjct: 176 LQGYDSVAMK----CDIEMGGTDQKFNLLMGRTLGRTYGIGKEQAIIMMPLLVGLDGVNK 231

Query: 237 MGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRMAKLQGK 293
           M K+L   I + +      + +    +I D  +  + + L+     +I            
Sbjct: 232 MSKSLGNYIGVTESAN---DIFAKTLSISDDLMWVWYELLSDKSSDDILNLKADVSSAKL 288

Query: 294 EINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLL 353
              + K+ +A EIT+  HG  EA  A                MP   I KDE    + ++
Sbjct: 289 HPKKVKENLALEITSRFHGISEAGAAKDEFDRVHSKKELPSDMPEFEIVKDE----IWIV 344

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
             +      +S  EARRH+K+NA+ +N   + +E+L++      + G   L  GKK +  
Sbjct: 345 EALSNCALCSSNAEARRHIKANAVSVNQQKVIDEQLKL------AKGEYILQVGKKTYAK 398

Query: 414 CHL 416
             +
Sbjct: 399 LKV 401


>gi|159125094|gb|EDP50211.1| tyrosyl-tRNA synthetase, mitochondrial precursor (tyrosine--tRNA
           ligase) (tyrrs) [Aspergillus fumigatus A1163]
          Length = 631

 Score =  356 bits (914), Expect = 4e-96,   Method: Composition-based stats.
 Identities = 119/445 (26%), Positives = 199/445 (44%), Gaps = 72/445 (16%)

Query: 5   KSDFLSILSERGFIHQISNPREL-DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           +  F+  L ERG IH +   R+L   + ++  V  Y+G D TA SLH GH+   M+L W 
Sbjct: 102 RKSFVEHLEERGLIHDVVGERDLLHRVFTEKRVGIYVGVDPTAPSLHVGHMLPFMVLAWG 161

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSF--------IK 115
              G     L+GG TS IGDP+ R + R  M S   + N+  +                K
Sbjct: 162 YVWGLPVTYLLGGATSRIGDPTGRLKGREAMDSSVRKANMASMHMQLKKLGASVEQYGRK 221

Query: 116 YGTGKTDAL---MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFL 172
           +G  K       ++NN TW  S   +++LR++G+   +  ML  E+V++R+ +   +SF 
Sbjct: 222 HGYHKEKIWRRALVNNNTWWNSTSLLEVLRDLGAHTRLGPMLGRETVKNRMTKGDGMSFA 281

Query: 173 EFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL---------------K 217
           EF Y +LQA+D+  L +    ++Q+GGSDQ+GNI+ G+D  + +                
Sbjct: 282 EFTYPLLQAWDWWVLFRK-GVQVQVGGSDQYGNILFGMDAVKSISKNTAIEQDRNPLEDD 340

Query: 218 TPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT 277
             K    T+PLLT A+G K GK+   A+WL+K+MTS +  +Q++    D  V  + K  T
Sbjct: 341 LDKPIGFTTPLLTAANGEKFGKSAGNAVWLDKDMTSTFELYQFFVRTPDDVVERYLKLFT 400

Query: 278 TLPMSEIDRMAKLQGKEI--NEAKKIIATEITTMVHGREEAEKAATAAMECF-------- 327
            LP+ +I  + + Q K+     A+  +A E   ++HG+EEA+  A    + F        
Sbjct: 401 FLPLPKIAEIMEEQNKDPSKRIAQHTLAAEFLELIHGKEEADAVALQHRQLFRPRSSTAE 460

Query: 328 ---------------------------------DMSIHSQHMPTISISKDEVSRGMGLLT 354
                                              +  +   P +++    +        
Sbjct: 461 PSPMPKVTSPPRSHANSPTASYANPQSGNKYAPQTNFANMGSPHVTLPHS-LVYNQPFHK 519

Query: 355 LIVKAGFATSTNEARRHLKSNAIKI 379
           ++  AG  +S +E  R + +    +
Sbjct: 520 ILWHAGLVSSKSEGHRIVANKGAYV 544


>gi|255322539|ref|ZP_05363684.1| tyrosyl-tRNA synthetase [Campylobacter showae RM3277]
 gi|255300447|gb|EET79719.1| tyrosyl-tRNA synthetase [Campylobacter showae RM3277]
          Length = 402

 Score =  356 bits (914), Expect = 4e-96,   Method: Composition-based stats.
 Identities = 96/410 (23%), Positives = 169/410 (41%), Gaps = 33/410 (8%)

Query: 18  IHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPIS 72
           + ++ +   ++ L               G+D TA  LH GH   L  +  LQK G     
Sbjct: 16  VAEMIDEERIENLVKNYYEKGENFYVKAGFDPTAPDLHLGHTVVLQKMALLQKHGAIVQF 75

Query: 73  LMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL 132
           L+G  T  IGDPS + ++R+ +  + +  N +  +      +     K    ++ N  WL
Sbjct: 76  LIGDFTGQIGDPSGKSQTRKKLDRETVVANAKTYEEQVFKILDPQKTK----LMFNSKWL 131

Query: 133 CSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYD 192
             +     + E+ S F+V RML  +    R K   S+S  EF Y +LQ YD V +     
Sbjct: 132 NELGAAG-IVELTSTFAVARMLERDDFEKRYKSGASISISEFLYPLLQGYDSVAMK---- 186

Query: 193 CRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKE 250
           C ++MGG+DQ  N++ G  L        +   +  PLL    G  KM K+L   I +  E
Sbjct: 187 CDIEMGGTDQKFNLLMGRTLQRVYNVGKEQAVIMMPLLEGLDGVNKMSKSLGNYIGVTDE 246

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG---KEINEAKKIIATEIT 307
              P + +    ++ D  +  + + L+     EI  +              K+ +A EIT
Sbjct: 247 ---PNDMFAKVLSVSDELMWRWYELLSEKSTEEIANLKADVASGKAHPKAVKEALALEIT 303

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
              +G   A++A          ++    M    +S       + ++  +   G   S+++
Sbjct: 304 ARYNGEAAAKEAKAEFDRVHSQNLIPTEMDEFELSA-----PVWIVQALTHCGLCASSSQ 358

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           ARR + +NA+ +N   I++E+L++        G   L  GK+      + 
Sbjct: 359 ARRDIAANAVSLNQEKIADEQLKL------GAGEYVLQVGKRKFAKLKVT 402


>gi|116625757|ref|YP_827913.1| tyrosyl-tRNA synthetase [Candidatus Solibacter usitatus Ellin6076]
 gi|116228919|gb|ABJ87628.1| tyrosyl-tRNA synthetase [Candidatus Solibacter usitatus Ellin6076]
          Length = 398

 Score =  356 bits (913), Expect = 5e-96,   Method: Composition-based stats.
 Identities = 93/401 (23%), Positives = 170/401 (42%), Gaps = 27/401 (6%)

Query: 15  RGFIHQISNPRELDILC-----SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
           R  + +I    +L         +   +    G+D TA  LH GH   L  +   Q  GH 
Sbjct: 11  RKGMAEIIREEDLRERLIQSEKTGRKLRVKAGFDPTAPDLHLGHTVLLRKMKHFQDLGHT 70

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
            I L+G  T +IGDP+ R+ +R  M ++ I+ N E  K      +     +    +  N 
Sbjct: 71  VIFLIGDMTGMIGDPTGRNVTRPPMTTEAIERNAETYKQQVFKILDPAKTE----VRFNS 126

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
            WL  +++ ++++ + S ++V R+L  +    R      +S  E  Y + Q YD V L  
Sbjct: 127 HWLAPLRWEEVIK-LTSKYTVARLLERDDFAKRYAANAPISLHELMYPLAQGYDSVALES 185

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLN 248
           +    ++MGG+DQ  N++ G +L              P+L    G  KM K+L   I + 
Sbjct: 186 D----VEMGGTDQKFNLLVGRELQRDYGQQPQIVAMVPILEGLDGVNKMSKSLGNYIGIT 241

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITT 308
           +   +P   ++    + D  +  + + LT   ++EI  M +       EAK  +   I  
Sbjct: 242 E---APEVMFRKVMQVSDDLMWRYYELLTDKSLAEIAAMQR--SMHPMEAKVALGKHIVA 296

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSR-GMGLLTLIVKAGFATSTNE 367
             H  E+AE+AA               +PT+ + +  +++ G+ +  L+ + G   S  +
Sbjct: 297 DFHTAEDAERAAEVFNAVVRRKEVPSDVPTVPMPEGVMTQAGLRVDKLLARIGLVASVTD 356

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGK 408
           A R +K+ A++IN   +    +       +    + +  GK
Sbjct: 357 AVRKIKAGAVEINGEKVREVLMA------NPPAEMVIQVGK 391


>gi|42522726|ref|NP_968106.1| tyrosyl-tRNA synthetase [Bdellovibrio bacteriovorus HD100]
 gi|81617882|sp|Q6MNQ2|SYY_BDEBA RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|39573922|emb|CAE79099.1| tyrS [Bdellovibrio bacteriovorus HD100]
          Length = 405

 Score =  356 bits (913), Expect = 5e-96,   Method: Composition-based stats.
 Identities = 94/395 (23%), Positives = 168/395 (42%), Gaps = 26/395 (6%)

Query: 21  ISNPRELDILC----SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGG 76
           I++   L  L     ++  +   +G D T   +H GH   +  L   Q  GHK   L+G 
Sbjct: 19  INDEDMLKKLKRSIETKKPLNIKLGADPTRPDIHLGHTVVINKLKTFQDLGHKVSFLIGD 78

Query: 77  GTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIK 136
            T++IGDPS ++ +R M+  +EI+EN           +     +    ++ N +W+  + 
Sbjct: 79  FTAMIGDPSGKNSTRPMLTREEIEENGRSYAKQIFKILDPEKTE----IVYNSSWIMKMT 134

Query: 137 YIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQ 196
             + +  + S ++V ++L  E    R +    +   EF Y + Q YD V L  +    ++
Sbjct: 135 PAEFI-TMTSKYTVAQLLEREDFTKRYRSGTPIGIHEFIYPLTQGYDSVALKTD----VE 189

Query: 197 MGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPY 255
           +GG+DQ  N++ G  +           LT P+L    G  KM K+L   I     + +P 
Sbjct: 190 LGGTDQKFNLLVGRAMQAAYGMEAQCVLTMPILEGIDGVNKMSKSLDNYI---SVVDTPK 246

Query: 256 NFWQYWRNIDDADVVSFAKRLTTL---PMSEIDRMAKLQGKEINEAKKIIATEITTMVHG 312
           + +     I D  +  + + LT +    ++++        K     K  +A  +    H 
Sbjct: 247 DMFGKTMRISDELMYRWYELLTDVGAAGLNQLRADVAEGRKHPRTVKVELAKFLIKRFHS 306

Query: 313 REEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHL 372
           + EA+ A       F        +P   +   E    MGL  L+VKA  A S +EA R +
Sbjct: 307 QAEAQAAEDEFNRIFVEKGLPDEVPDFEV---EAETQMGLAALMVKAQLAASNSEAGRLI 363

Query: 373 KSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFG 407
           +   ++I+   +S+ +L+I   D  S  +  L  G
Sbjct: 364 QGGGVQIDGEKVSDPRLKI---DLKSGASFVLKAG 395


>gi|302143636|emb|CBI22389.3| unnamed protein product [Vitis vinifera]
          Length = 399

 Score =  356 bits (913), Expect = 5e-96,   Method: Composition-based stats.
 Identities = 135/418 (32%), Positives = 203/418 (48%), Gaps = 73/418 (17%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           +P  +S+ + IL +RG +  I++P  L    S   +  Y G+D TA SLH G+L  L++L
Sbjct: 54  IPLHRSNVIEILEQRGLVDSITSP-ILRASSSTQTLKVYCGFDPTAESLHLGNLLGLIVL 112

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            W ++ GHK ++L+GG T+ IGDPS +   R  +  + +++N   I    +S +   T  
Sbjct: 113 SWFRRCGHKAVALIGGATARIGDPSGKSLERPELNLEALEKNTIGITNTITSILNRSTTN 172

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
                                   G   SV  M++ ESV+ RL+ EQ +S+ EF Y +LQ
Sbjct: 173 ------------------------GGDDSVGTMMAKESVKKRLESEQGMSYTEFTYQLLQ 208

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK-LFALTSPLLTTASGTKMGK 239
            YDF+ L +N    +Q GGSDQWGNI  G +L  ++      + LT PLL  + GTK GK
Sbjct: 209 GYDFLYLFENEGVSVQFGGSDQWGNITAGTELIRKILQTDGAYGLTFPLLLKSDGTKFGK 268

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAK 299
           +  GAIWL+  M SPY F+QY+ ++ DADVV         P +E     KL  K I    
Sbjct: 269 SEDGAIWLSPAMLSPYKFYQYFFSVPDADVVR--------PGAE----TKLDWKTI---- 312

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKA 359
                                            ++ +P+ S+S DEV   + LL L +  
Sbjct: 313 ------------------------------EGIAKDVPSCSLSYDEV-LNLSLLDLSIST 341

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           G   S + ARR LK   + +NN+ I +E  +I+ +D      + LS GKKN ++  + 
Sbjct: 342 GLLESKSAARRLLKQGGLYLNNNRIDSEAKRIEAEDIVDGKVLLLSAGKKNKVVVRIS 399


>gi|297171447|gb|ADI22448.1| tyrosyl-tRNA synthetase [uncultured gamma proteobacterium
           HF0500_05P21]
          Length = 404

 Score =  356 bits (913), Expect = 5e-96,   Method: Composition-based stats.
 Identities = 106/422 (25%), Positives = 186/422 (44%), Gaps = 25/422 (5%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M +     L I  +RG    +           +  +   +G+D TA  LH GH   +  +
Sbjct: 1   MISKDKQLLEI--QRGTEEILVEEEFAKRFHQKKPLKIKVGFDPTAPDLHLGHTVIINKM 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+ I L+G  T +IGDPS  +E+R ++  ++I EN    +      +     +
Sbjct: 59  RQFQEFGHEIIFLIGDFTGMIGDPSGVNETRPVLTRKQIDENAATYEKQIFKILDKDLTR 118

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N +W+  I    L+ EI S ++V RML  +  + R K    +S  E  Y ++Q
Sbjct: 119 ----IEFNSSWMQQIDSSKLI-EIASKYTVARMLERDDFKQRFKTGNPISIHELLYPLVQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGK 239
           AYD V L    +  +++GG+DQ  N++ G  L +        A+T PLL    G  KM K
Sbjct: 174 AYDSVVL----EVDVELGGTDQKFNLLVGRHLQQLYGQSPQTAITLPLLEGLDGVKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI--DRMAKLQGKEINE 297
           T +  I L      P        +I D  +  + + L+T  + EI   +     GK   +
Sbjct: 230 TANNFIALT---DPPKEMLGKIMSISDELMWRYFELLSTRSIDEICLLQKQVKDGKNPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLL---T 354
            K ++A EI    + ++ +  A  + ++ F      + + ++SI+  EV    G++    
Sbjct: 287 VKFLLAEEIVERFYDKQSSGDAKESFLKQFQKGQIPEKIKSVSINYSEVESEPGIVNMAK 346

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           ++  A   TS +E  R +K+ ++++    I +++LQ      D+     LSFGK      
Sbjct: 347 VLYLANLVTSVSEGHRAIKAGSVRLEGEKIESKQLQ-----MDANSRHVLSFGKHRFAKV 401

Query: 415 HL 416
             
Sbjct: 402 KF 403


>gi|56807384|ref|ZP_00365364.1| COG0162: Tyrosyl-tRNA synthetase [Streptococcus pyogenes M49 591]
          Length = 322

 Score =  356 bits (913), Expect = 6e-96,   Method: Composition-based stats.
 Identities = 106/329 (32%), Positives = 173/329 (52%), Gaps = 25/329 (7%)

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
             +KIKG  S+F+ +  G   A ++NN  W   I +ID LR++G +F+VN M+S +SV+ 
Sbjct: 1   WSDKIKGQLSTFLDFENGDNKAELVNNYDWFSQISFIDFLRDVGKYFTVNYMMSKDSVKK 60

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKL 221
           R+  E  +S+ EF Y I+Q YDF EL   ++  LQ+GGSDQWGN+  G +L  +      
Sbjct: 61  RI--ETGISYTEFAYQIMQGYDFYELNDKHNVTLQIGGSDQWGNMTAGTELLRKKADKTG 118

Query: 222 FALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPM 281
             +T PL+T ++G K GK+   A+WL+ + TSPY  +Q+W N+ D D V F K  T L +
Sbjct: 119 HVMTVPLITDSTGKKFGKSEGNAVWLDADKTSPYEMYQFWLNVMDDDAVRFLKIFTFLSL 178

Query: 282 SEIDRMAKLQGKEINE--AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI 339
            EI  +        +E  A+K +A E+ T+VHG E  ++A     + F  +I +      
Sbjct: 179 DEIAEIETQFNAARHERLAQKTLAREVVTLVHGEEAYKQALNITEQLFAGNIKN------ 232

Query: 340 SISKDEVSRGM--------------GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIIS 385
            +S +E+ +G+               ++ ++V A  + S  +AR  +++ AI IN   + 
Sbjct: 233 -LSANELKQGLSNVPNYHVQSIDNHNIVEILVAAKISPSKRQAREDVQNGAIYINGDRVQ 291

Query: 386 NEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +   Q+   D        +  GKK + + 
Sbjct: 292 DLDYQLSNDDKIDDQLTVIRRGKKKYAVL 320


>gi|255022264|ref|ZP_05294257.1| Tyrosyl-tRNA synthetase [Acidithiobacillus caldus ATCC 51756]
 gi|254968296|gb|EET25865.1| Tyrosyl-tRNA synthetase [Acidithiobacillus caldus ATCC 51756]
          Length = 411

 Score =  355 bits (912), Expect = 6e-96,   Method: Composition-based stats.
 Identities = 89/397 (22%), Positives = 166/397 (41%), Gaps = 25/397 (6%)

Query: 25  RELDILCSQGV-VTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGD 83
             L     +G  +   +G D TA  LH GH   L      Q  GH+ + L+G  T+ IGD
Sbjct: 27  EALQRAAQEGRALRVKLGMDPTAPDLHLGHTVLLHKARQFQDLGHQVLFLIGDFTARIGD 86

Query: 84  PSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLRE 143
           P+ +  +R  + ++ +Q N E  +      +     +    ++ N  WL  ++  +L+ +
Sbjct: 87  PTGKSSTRPPLSAEAVQANAETYRQQIFRILDPARTE----VVFNSHWLDRLRPQELI-Q 141

Query: 144 IGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQW 203
           + + ++V RML  +    R   +Q ++  EF Y +LQ YD V L  +    +++GG+DQ 
Sbjct: 142 LAARYTVARMLERDDFSKRYHAQQPIAVHEFLYPLLQGYDSVALRAD----VELGGTDQR 197

Query: 204 GNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYWR 262
            N++ G +L +         LT P+L    G  KM K+L   I L     +P   +    
Sbjct: 198 FNLLVGRELQKEYGQRPQVVLTMPILEGLDGVQKMSKSLGNTIALE---DTPEEMFGKLM 254

Query: 263 NIDDADVVSFAKRLTTLPMSE---IDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKA 319
           +I D  +  +   L+     E   + + A+       + K  +A E+ T  HG     +A
Sbjct: 255 SISDTLMWRYYALLSAKSQPEQVALRQKAEAGEINPRDCKLDLAQELVTRFHGSSAGVRA 314

Query: 320 ATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKI 379
               +  F        +   ++    +   + L   +   G+  S++E  R ++  A+ +
Sbjct: 315 RETFLAQFQRRERPDDL---ALQTLRLPPPLTLAKTLQALGWVRSSSEGMRKIREGAVHL 371

Query: 380 NNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             + I +  L ++           L FGK++     L
Sbjct: 372 GETRIEDPSLALEP-----GPEYFLQFGKRHVARVCL 403


>gi|70994384|ref|XP_751993.1| tyrosyl-tRNA synthetase, mitochondrial precursor (tyrosine--tRNA
           ligase) (tyrrs) [Aspergillus fumigatus Af293]
 gi|66849627|gb|EAL89955.1| tyrosyl-tRNA synthetase, mitochondrial precursor (tyrosine--tRNA
           ligase) (tyrrs) [Aspergillus fumigatus Af293]
          Length = 632

 Score =  355 bits (912), Expect = 6e-96,   Method: Composition-based stats.
 Identities = 119/445 (26%), Positives = 198/445 (44%), Gaps = 72/445 (16%)

Query: 5   KSDFLSILSERGFIHQISNPREL-DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           +  F+  L ERG IH +   R+L   + ++  V  Y+G D TA SLH GH+   M+L W 
Sbjct: 103 RKSFVEHLEERGLIHDVVGERDLLHRVFTEKRVGIYVGVDPTAPSLHVGHMLPFMVLAWG 162

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSF--------IK 115
              G     L+GG TS IGDP+ R + R  M S   + N+  +                K
Sbjct: 163 YVWGLPVTYLLGGATSRIGDPTGRLKGREAMDSSVRKANMASMHMQLKKLGASVEQYGRK 222

Query: 116 YGTGKTDAL---MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFL 172
           +G  K       ++NN TW  S   +++LR++G+   +  ML  E+V++R+ +   +SF 
Sbjct: 223 HGYHKEKIWRRALVNNNTWWNSTSLLEVLRDLGAHTRLGPMLGRETVKNRMTKGDGMSFA 282

Query: 173 EFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL---------------K 217
           EF Y +LQA+D+  L +    ++Q+GGSDQ+GNI+ G+D  + +                
Sbjct: 283 EFTYPLLQAWDWWVLFRK-GVQVQVGGSDQYGNILFGMDAVKSISKNTAIEQDRNPLEDD 341

Query: 218 TPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT 277
             K    T+PLLT A+G K GK+   A+WL+K+MTS +  +Q++    D  V  + K  T
Sbjct: 342 LDKPIGFTTPLLTAANGEKFGKSAGNAVWLDKDMTSTFELYQFFVRTPDDVVERYLKLFT 401

Query: 278 TLPMSEIDRMAKLQGKEI--NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQH 335
            LP+ +I  + + Q K+     A+  +A E   ++HG+EEA+  A    + F     +  
Sbjct: 402 FLPLPKIAEIMEEQNKDPSKRIAQHTLAAEFLELIHGKEEADAVALQHRQLFRPRSSTAE 461

Query: 336 M-----------------------------------------PTISISKDEVSRGMGLLT 354
                                                     P +++    +        
Sbjct: 462 PSPMPKVTSPPRSHANSPTASYANPQSGNKYAPQTNFANMGGPHVTLPHS-LVYNQPFHK 520

Query: 355 LIVKAGFATSTNEARRHLKSNAIKI 379
           ++  AG  +S +E  R + +    +
Sbjct: 521 ILWHAGLVSSKSEGHRIVANKGAYV 545


>gi|148926262|ref|ZP_01809947.1| tyrosyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CG8486]
 gi|205356288|ref|ZP_03223054.1| tyrosyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CG8421]
 gi|145845433|gb|EDK22526.1| tyrosyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CG8486]
 gi|205345893|gb|EDZ32530.1| tyrosyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CG8421]
          Length = 401

 Score =  355 bits (912), Expect = 8e-96,   Method: Composition-based stats.
 Identities = 108/422 (25%), Positives = 183/422 (43%), Gaps = 36/422 (8%)

Query: 7   DFLSILSE--RGFIHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLML 59
           D   IL+E  RG   ++ +   ++ L               G+D TA  LH GH   L  
Sbjct: 2   DIKKILAEVKRGC-AELIDEERIEKLIKNYYEKGENFFIKAGFDPTAPDLHLGHSVVLTK 60

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG 119
           + +LQK G     L+G  T  IGDPS +  +R+ +  +++  N +  +      +     
Sbjct: 61  MAFLQKHGAIVQFLIGDFTGQIGDPSGKSATRKKLDKEQVLINAKTYETQVFKVLD---- 116

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
           K    +  N TWL  +     + E+ S FSV RML  +    R K +  +S  EF Y +L
Sbjct: 117 KEKTQIKFNSTWLNELGAAG-IVELTSTFSVARMLERDDFTKRFKEQSPISICEFLYPLL 175

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASGT-KM 237
           Q YD V L  +    ++MGG+DQ  N++ G  L        +   +  PLL    G  KM
Sbjct: 176 QGYDSVALKSD----IEMGGTDQKFNLLMGRQLQRVYNIGKEQAVIMMPLLEGLDGVNKM 231

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK---LQGKE 294
            K+L+  I + ++     + +    +I D  +  + + L+   + EI ++ K        
Sbjct: 232 SKSLNNYIGVTEKAN---DMYAKILSISDELMFRYYELLSQKSLEEIAQIKKDIEQSNLH 288

Query: 295 INEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLT 354
             +AK+ +A EIT   H +EEA  A +        +     M    I        + L  
Sbjct: 289 PKKAKENLALEITERFHSKEEANNAKSEFDRIHSQNALPSDMAEFEI-----QGKIWLAK 343

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +V+ G  +ST+ ARR + +NA+ +N+  +S+E++ ++       G   L  GK+     
Sbjct: 344 ALVECGLESSTSAARRSISANAVSVNSQKVSDEQMYLEQ------GEYILQIGKRKFAKL 397

Query: 415 HL 416
            +
Sbjct: 398 KV 399


>gi|139438885|ref|ZP_01772345.1| Hypothetical protein COLAER_01349 [Collinsella aerofaciens ATCC
           25986]
 gi|133775596|gb|EBA39416.1| Hypothetical protein COLAER_01349 [Collinsella aerofaciens ATCC
           25986]
          Length = 403

 Score =  355 bits (912), Expect = 8e-96,   Method: Composition-based stats.
 Identities = 95/398 (23%), Positives = 174/398 (43%), Gaps = 21/398 (5%)

Query: 19  HQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGG 77
            QI    +L     +G  +   +G D T+  LH GH   L  +   Q  GH    ++G G
Sbjct: 16  AQIVPEADLRKKLEKGEPLNIKLGVDPTSPDLHLGHAVPLRKMRQFQDLGHNVTLIIGNG 75

Query: 78  TSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKY 137
           T++IGDPS ++ +R  +  ++I+ N E         +          +++N  W+ S+  
Sbjct: 76  TALIGDPSGKNSTRPQLSQEQIEANAETYVSQAMKILD----PEKTTIVHNGDWILSMDL 131

Query: 138 IDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQM 197
             LL ++ S F+V R+L  +    R + +  ++  EF Y ++QA+D V++  +    ++M
Sbjct: 132 AGLL-QVCSKFTVARILERDDFTKRYQSQTPIALHEFLYPVMQAFDSVQIKAD----VEM 186

Query: 198 GGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYN 256
           GG+DQ  N++ G +L E++      ALT PLL    G  KM K+    I L     +P +
Sbjct: 187 GGTDQLFNLLAGRELMEKMGMEPQIALTMPLLEGTDGVRKMSKSYGNYIGLT---DAPKD 243

Query: 257 FWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG---KEINEAKKIIATEITTMVHGR 313
            +    +I D  +  + +  ++L  +E+D++         +  E K+ +  ++    HG 
Sbjct: 244 MFGKTMSIPDEMIGKYYRLASSLTPAEVDKIDAALADGSADPYELKRALGRDLCDTYHGA 303

Query: 314 EEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTNEARRHL 372
              ++A       F     +   P   +       G + L  L+   G + S  +ARR +
Sbjct: 304 GAGDEAQAEFDRVFKEGQLA-DFPEKHVELTVNDEGQIYLAGLLKDLGLSASAGQARRDI 362

Query: 373 KSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
               +KIN   ++ +   I            LS GK+ 
Sbjct: 363 DGGGVKINGKAVAPKSYNIDPSALKLGDT--LSVGKRK 398


>gi|730884|sp|P41256|SYY_THIFE RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=TyrRZ;
           AltName: Full=Tyrosine--tRNA ligase; Short=TyrRS
 gi|505366|emb|CAA55643.1| tyrosine--tRNA ligase [Acidithiobacillus ferrooxidans]
          Length = 407

 Score =  355 bits (911), Expect = 8e-96,   Method: Composition-based stats.
 Identities = 94/389 (24%), Positives = 169/389 (43%), Gaps = 24/389 (6%)

Query: 32  SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESR 91
               +   +G D TA  LH G    L      Q  GH+ + ++G  T++IGDP+ +  +R
Sbjct: 35  DNRPLRIKLGMDPTAPDLHLGAYVLLHKARQFQDLGHRLLFVIGDFTAMIGDPTGKSVTR 94

Query: 92  RMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVN 151
           + +  +E+  N    +      +     +    ++ N  WL +++  +L+ +I + ++V 
Sbjct: 95  KALSREEVVANAATYRPQVFKILDPERTE----VMFNSEWLGALRPEELI-QIAACYTVA 149

Query: 152 RMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGID 211
           RML  +    R    Q ++  EF Y +LQ YD V +  +    +++GG+DQ  N++ G +
Sbjct: 150 RMLERDDFNKRYSANQPIAIHEFLYPLLQGYDSVAIKAD----VELGGTDQRFNLLVGRE 205

Query: 212 LGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVV 270
           L           LT P+L    G  KM K+L   I +      P   +    +I D  + 
Sbjct: 206 LQREYGQKPQLVLTMPILEGLDGVQKMSKSLGNFIAVE---DPPAEMFGKIMSISDFLMW 262

Query: 271 SFAKRLTTLPMSEIDRMAKLQ---GKEINEAKKIIATEITTMVHGREEAEKAATAAMECF 327
            +   L+ +P  E  R+ K      +   + K  +A E+    HG   A++A  A +  F
Sbjct: 263 RYYALLSRVPAVEQTRLQKEAASGARNPRDIKLDLAGELVRRFHGTAAAQEAHIAFLARF 322

Query: 328 DMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNE 387
                 + +P  +I   E  R   L  L+V+   A ST+EA R +K  A++++   + + 
Sbjct: 323 QRHETPEDLPLQAIKLSEAPR---LSQLLVQVHLAASTSEAMRKMKEGAVRVDWRRVVDP 379

Query: 388 KLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
              + L          L FGK++     L
Sbjct: 380 ATILAL-----DAVYLLQFGKRHFARVAL 403


>gi|254468670|ref|ZP_05082076.1| tyrosyl-tRNA synthetase [beta proteobacterium KB13]
 gi|207087480|gb|EDZ64763.1| tyrosyl-tRNA synthetase [beta proteobacterium KB13]
          Length = 389

 Score =  355 bits (911), Expect = 9e-96,   Method: Composition-based stats.
 Identities = 98/412 (23%), Positives = 175/412 (42%), Gaps = 27/412 (6%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L  +  RG    +      + + S   +    G+D TA  LH GH   L  L   Q  GH
Sbjct: 2   LDEIK-RGADEILVFSEFEEKIKSGKKLKIKAGFDPTAPDLHLGHTVLLNKLRQFQNFGH 60

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           + I L+G  T +IGDP+ ++ +R  +   ++++N +  +      +     K    ++ N
Sbjct: 61  EVIFLIGDFTGMIGDPTGKNTTRPPLTEDQVKQNAKTYQNQVFKILD----KEKTRVVFN 116

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL ++    +L+ + + ++V RML  +    R K  QS+S  EF Y ++Q YD V L 
Sbjct: 117 SEWLKNLGADGMLK-LSAQYTVARMLERDDFSKRFKSNQSISIHEFMYPLMQGYDSVAL- 174

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWL 247
              +  +++GG+DQ  N++ G +L +         LT PLL    G  KM K+L+  I +
Sbjct: 175 ---EADVELGGTDQKFNLLMGRELQKAYGQTPQSILTMPLLEGLDGVNKMSKSLNNYIGI 231

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKKIIATE 305
            +    P   +    +I D  ++ +   L+     EI+   K    G+     K   + E
Sbjct: 232 EE---PPEVMYAKLLSISDDLMLRYIDLLSLKNNDEINSWKKRLKGGENPKNIKDEFSKE 288

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           I    H  E   KA     +          +    ++K +    + +  ++    F +ST
Sbjct: 289 IIERFHDHEGYLKAKKDFEQR-SSGHAPDEVQEFKMNKQD---NLAIPNILKNINFVSST 344

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           +EA R +KS  I+++   I ++   I   +F       +  GK+      L 
Sbjct: 345 SEALRLMKSGGIRVDGEKI-DKDYSINTDEF------LIQVGKRKFGKIKLT 389


>gi|186684000|ref|YP_001867196.1| tyrosyl-tRNA synthetase [Nostoc punctiforme PCC 73102]
 gi|186466452|gb|ACC82253.1| tyrosyl-tRNA synthetase [Nostoc punctiforme PCC 73102]
          Length = 439

 Score =  355 bits (911), Expect = 9e-96,   Method: Composition-based stats.
 Identities = 92/395 (23%), Positives = 165/395 (41%), Gaps = 27/395 (6%)

Query: 23  NPRELDILCS--QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSI 80
           N   L+ L +     +   +G D T + +H GH   +  L   Q  GH  + ++G  T+ 
Sbjct: 67  NSESLEKLLTTTNKPLRIKLGIDPTGTDIHLGHSIPVRKLRAFQDAGHIAVLIIGDFTAR 126

Query: 81  IGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDL 140
           IGDP+ + E RR +   ++ +N +         + + T      +  N  WL  +    +
Sbjct: 127 IGDPTGKSEVRRQLTEADVAQNAQTYLDQVRPILDFDTP-GRLEVRYNSEWLSGLNLEKI 185

Query: 141 LREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGS 200
           L E+ S  +V +ML+ E    R K+E  +   EF Y ++Q +D V +    +  +++GG+
Sbjct: 186 L-ELLSTMTVGQMLAKEGFADRYKKENPIFIHEFLYPLMQGFDSVAV----EADVELGGT 240

Query: 201 DQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQ 259
           DQ  NI  G DL         F +  P+L    G  KM K+L   I L++    P   +Q
Sbjct: 241 DQKFNIAVGRDLQRHFGQKPQFGMLLPILIGTDGVQKMSKSLGNYIGLSE---HPGQKYQ 297

Query: 260 YWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKA 319
             + + D  +  + + LT LP+  +            + + ++A E+    HG   A++A
Sbjct: 298 KLQGVPDNLLEQYFELLTDLPLDNLPE-------NPRDRQTLLAWEVVKQYHGETAAQEA 350

Query: 320 ATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKI 379
             AA            +P  S++  E+S    L  ++   G   ST E +R ++   ++I
Sbjct: 351 KEAAQS----GGKEGAVPEFSLA--EISHPAKLAYILNVTGLCKSTGEGKRKIQEGGVRI 404

Query: 380 NNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +   I++                 L  GK   +  
Sbjct: 405 DGDRITDVDTTFADSAQLQGK--VLQVGKNKFVRL 437


>gi|153951241|ref|YP_001397639.1| tyrosyl-tRNA synthetase [Campylobacter jejuni subsp. doylei 269.97]
 gi|152938687|gb|ABS43428.1| tyrosyl-tRNA synthetase [Campylobacter jejuni subsp. doylei 269.97]
          Length = 401

 Score =  355 bits (911), Expect = 9e-96,   Method: Composition-based stats.
 Identities = 109/422 (25%), Positives = 183/422 (43%), Gaps = 36/422 (8%)

Query: 7   DFLSILSE--RGFIHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLML 59
           D   IL+E  RG   ++ +   ++ L               G+D TA  LH GH   L  
Sbjct: 2   DIKKILAEVKRGC-AELIDEERIEKLIKNYYEKGENFFIKAGFDPTAPDLHLGHSVVLTK 60

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG 119
           + +LQK G     L+G  T  IGDPS +  +R+ +  +++  N +  +      +     
Sbjct: 61  MAFLQKHGAIVQFLIGDFTGQIGDPSGKSATRKKLDKEQVLINAKTYETQVFKVLD---- 116

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
           K    +  N TWL  +     + E+ S FSV RML  +    R K +  +S  EF Y +L
Sbjct: 117 KEKTQIKFNSTWLNELGAAG-IVELASTFSVARMLERDDFTKRFKEQSPISICEFLYPLL 175

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASGT-KM 237
           Q YD V L  +    ++MGG+DQ  N++ G  L        +   +  PLL    G  KM
Sbjct: 176 QGYDSVALKSD----IEMGGTDQKFNLLMGRQLQRIYSIGKEQAVIMMPLLEGLDGVNKM 231

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK---LQGKE 294
            KTL+  I + ++     + +    +I D  +  + + L+   + EI ++ K        
Sbjct: 232 SKTLNNYIGVTEKAN---DMYAKILSISDELMFRYYELLSQKSLEEIAQIKKDIEQGNLH 288

Query: 295 INEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLT 354
             +AK+ +A EIT   H +EEA  A +        +     M    I        + L  
Sbjct: 289 PKKAKENLALEITERFHSKEEANNAKSEFDRIHSQNALPSDMAEFEI-----QGKIWLAK 343

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +V+ G  +ST+ ARR + +NA+ +N+  +S+E++ ++       G   L  GK+     
Sbjct: 344 ALVECGLESSTSAARRSISANAVSVNSQKVSDEQMHLEQ------GEYILQIGKRKFAKL 397

Query: 415 HL 416
            +
Sbjct: 398 KV 399


>gi|57238143|ref|YP_179393.1| tyrosyl-tRNA synthetase [Campylobacter jejuni RM1221]
 gi|81353426|sp|Q5HTJ2|SYY_CAMJR RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|57166947|gb|AAW35726.1| tyrosyl-tRNA synthetase [Campylobacter jejuni RM1221]
 gi|315058704|gb|ADT73033.1| Tyrosyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni S3]
          Length = 401

 Score =  355 bits (911), Expect = 9e-96,   Method: Composition-based stats.
 Identities = 108/422 (25%), Positives = 182/422 (43%), Gaps = 36/422 (8%)

Query: 7   DFLSILSE--RGFIHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLML 59
           D   IL+E  RG   ++ +   ++ L               G+D TA  LH GH   L  
Sbjct: 2   DIKKILAEVKRGC-AELIDEERIEKLIKNYYEKGENFFIKAGFDPTAPDLHLGHSVVLTK 60

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG 119
           + +LQK G     L+G  T  IGDPS +  +R+ +  +++  N +  +      +     
Sbjct: 61  MAFLQKHGAIVQFLIGDFTGQIGDPSGKSATRKKLDKEQVLINAKTYETQVFKVLD---- 116

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
           K    +  N TWL  +     + E+ S FSV RML  +    R K +  +S  EF Y +L
Sbjct: 117 KEKTQIKFNSTWLNELGAAG-IVELTSTFSVARMLERDDFTKRFKEQSPISICEFLYPLL 175

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASGT-KM 237
           Q YD V L  +    ++MGG+DQ  N++ G  L        +   +  PLL    G  KM
Sbjct: 176 QGYDSVALKSD----IEMGGTDQKFNLLMGRQLQRVYNIGKEQAVIMMPLLEGLDGVNKM 231

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK---LQGKE 294
            K+L+  I + ++     + +    +I D  +  + + L+   + EI ++ K        
Sbjct: 232 SKSLNNYIGVTEKAN---DMYAKILSISDELMFRYYELLSQKSLEEIAQIKKDIEQSNLH 288

Query: 295 INEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLT 354
             +AK+ +A EIT   H +EEA  A +        +     M    I        + L  
Sbjct: 289 PKKAKENLALEITERFHSKEEANNAKSEFDRIHSQNALPSDMAEFEI-----QGKIWLAK 343

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +V+ G  +ST+ ARR + +NA+ +N+  +S+E++      +   G   L  GK+     
Sbjct: 344 ALVECGLESSTSAARRSISANAVSVNSQKVSDEQM------YLKQGEYILQIGKRKFAKL 397

Query: 415 HL 416
            +
Sbjct: 398 KV 399


>gi|328949986|ref|YP_004367321.1| Tyrosyl-tRNA synthetase [Marinithermus hydrothermalis DSM 14884]
 gi|328450310|gb|AEB11211.1| Tyrosyl-tRNA synthetase [Marinithermus hydrothermalis DSM 14884]
          Length = 435

 Score =  355 bits (911), Expect = 9e-96,   Method: Composition-based stats.
 Identities = 100/446 (22%), Positives = 194/446 (43%), Gaps = 57/446 (12%)

Query: 9   LSILSERGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           L+ L  RG   +I+   EL    + G  +   +G D T   LH GH   L  +   Q+ G
Sbjct: 7   LTELK-RGA-AEITPEEELREKLASGRKLIIKLGADPTRPDLHLGHAVVLRKMRQFQELG 64

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HK + ++G  T +IGDPS R+++R  +  +E + N +         ++         +  
Sbjct: 65  HKIVLIIGDFTGMIGDPSGRNKTRPPLTLEETRTNAQTYVAQVGKILRQEPD--VFELRY 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL  +++ ++++ + S  +V +ML  E  ++R      +S  EF Y + QAYD V +
Sbjct: 123 NSEWLGQLRFQEVIK-LASQITVAQMLEREDFKARYTAGTPISLHEFLYPLAQAYDSVAI 181

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIW 246
             +    ++MGG+DQ  N++ G ++       +  A   P+L    G  KM K+L   I 
Sbjct: 182 QAD----VEMGGTDQKFNLLVGREIQRAYGQEEQVAFLMPILPGLDGKEKMSKSLDNYIG 237

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           +N++   P + ++    + D  +  +   LT L  +E+ ++  L+   +  A +++A  +
Sbjct: 238 VNED---PTSMFKKLMRVPDHVLHEYFTLLTDLEAAEVQQL--LETGGMVGAHRVLARLV 292

Query: 307 TTMVH-----------------------GREEAEKA------------ATAAMECFDMSI 331
           T                           GR+ A KA            A A  +      
Sbjct: 293 TGAYVLERIPARMDRAFYEALGYDLEAAGRDPAPKASQYPEVSERLAHAEARYDAVAKGG 352

Query: 332 HSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQ 390
             + +P + ++ +E+  G + +  L   AG   S  EARR +++  ++++ +++++   Q
Sbjct: 353 IPEDIPLVEVAPEELKDGAIWVCRLFTLAGLTRSNGEARRLIQNRGLRVDGAVVTDPNQQ 412

Query: 391 IKLQDFDSTGNIKLSFGKKNHIICHL 416
           + L+       + L  GK   +   L
Sbjct: 413 LTLE-----RPLVLQRGKDRFVRVQL 433


>gi|254414535|ref|ZP_05028301.1| tyrosyl-tRNA synthetase [Microcoleus chthonoplastes PCC 7420]
 gi|196178765|gb|EDX73763.1| tyrosyl-tRNA synthetase [Microcoleus chthonoplastes PCC 7420]
          Length = 390

 Score =  355 bits (911), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 94/393 (23%), Positives = 170/393 (43%), Gaps = 32/393 (8%)

Query: 19  HQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGT 78
              S   E  I  ++  +   +G D T + +H GH   +  L   Q  GH  + ++G  T
Sbjct: 23  QDPSENLEQRIRQTERPLRIKLGIDPTGTDIHLGHSIPVRKLRAFQDAGHTAVLIIGDFT 82

Query: 79  SIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYI 138
           + IGDPS + E R+ +  +++Q+N +         + + T      +  N  WL  +   
Sbjct: 83  ARIGDPSGKSEVRKHLSDEQVQQNAQTYLDQVRPILDFETP-GRLEIRYNSEWLSKLDLA 141

Query: 139 DLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMG 198
           ++L ++ +  +V +ML+ E    R K+E  +   EF Y ++Q YD V +  +    +++G
Sbjct: 142 EIL-DLLATMTVGQMLAKEGFAERFKQENPIYLHEFLYPLMQGYDSVAVKAD----VELG 196

Query: 199 GSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNF 257
           G+DQ  NI  G DL      P  F L  P+L    G  KM K+L+  + L +        
Sbjct: 197 GTDQKFNIAVGRDLQRHFGQPPQFGLLLPILIGTDGVLKMSKSLNNYVGLREAAQP---M 253

Query: 258 WQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAE 317
           +Q      D  +  + + LT L ++E+            + ++++A  I T  HG++EA+
Sbjct: 254 YQKLEGTKDNLLEEYFELLTDLSLAELPV-------NPRDRQQLLAWTIVTQYHGQKEAD 306

Query: 318 KAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAI 377
           +A                +P  S+S+ E      L  ++  +G  +S+ E RR +K   +
Sbjct: 307 EAK-----------GGGAIPEFSLSQVEF--PAKLFYILNASGLCSSSGEGRRQIKGGGV 353

Query: 378 KINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
           K+    I++        +        L  GKK 
Sbjct: 354 KLEGDRITDVDCTFDSPEALEGK--VLQVGKKK 384


>gi|119500864|ref|XP_001267189.1| tyrosyl-tRNA synthetase, mitochondrial precursor (tyrosine--tRNA
           ligase) (tyrrs) [Neosartorya fischeri NRRL 181]
 gi|119415354|gb|EAW25292.1| tyrosyl-tRNA synthetase, mitochondrial precursor (tyrosine--tRNA
           ligase) (tyrrs) [Neosartorya fischeri NRRL 181]
          Length = 602

 Score =  354 bits (910), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 119/444 (26%), Positives = 198/444 (44%), Gaps = 70/444 (15%)

Query: 5   KSDFLSILSERGFIHQISNPREL-DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           +  F+  L ERG IH +   R+L   + ++  V  Y+G D TA SLH GH+   M+L W 
Sbjct: 73  RKSFVEHLEERGLIHDVVGERDLLHRVFTEKRVGIYVGVDPTAPSLHVGHMLPFMVLAWG 132

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSF----IKYGTG 119
              G     L+GG TS IGDP+ R + R  M S   + N+  +            +YG  
Sbjct: 133 YVWGLPVTYLLGGATSRIGDPTGRLKGREAMDSSVRKANMASMHMQLKKLGASVEQYGKK 192

Query: 120 KTDAL-------MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFL 172
                       ++NN TW  S  ++++LR++G+   +  ML  E+V++R+ +   +SF 
Sbjct: 193 HGYYKDKIWRRALVNNNTWWNSTSFLEVLRDLGAHTRLGPMLGRETVKNRMTKGDGMSFA 252

Query: 173 EFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL---------------K 217
           EF Y +LQA+D+  L +    ++Q+GGSDQ+GNI+ G+D  + +                
Sbjct: 253 EFTYPLLQAWDWWVLFRK-GVQVQVGGSDQYGNILFGMDAVKSISKNTAIEQDRNPLEDD 311

Query: 218 TPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT 277
             K    T+PLLT  +G K GK+   A+WL+K+MTS +  +Q++    D  V  + K  T
Sbjct: 312 LDKPIGFTTPLLTATNGEKFGKSAGNAVWLDKDMTSTFELYQFFVRTPDDVVERYLKLFT 371

Query: 278 TLPMSEIDRMAKLQGKEI--NEAKKIIATEITTMVHGREEAEKAATAAMECF---DMSIH 332
            LP+ +I  + + Q K+     A+  +ATE   ++HG+EEA+  A    + F     +  
Sbjct: 372 FLPLPKIADIMEEQNKDPSKRIAQHTLATEFLELIHGKEEADAVALQHRQLFRPRSSTAE 431

Query: 333 SQHMPTISISKD-------------------------------------EVSRGMGLLTL 355
              MP ++                                          +        +
Sbjct: 432 PSPMPKVTTPPSSHANSPTASYANPQSGNKYAPQTNFANMGSPHVTLPHSLVYNQPFHKI 491

Query: 356 IVKAGFATSTNEARRHLKSNAIKI 379
           +  AG  +S +E  R + +    +
Sbjct: 492 LWHAGLVSSKSEGHRIVANKGAYV 515


>gi|78189128|ref|YP_379466.1| tyrosyl-tRNA synthetase [Chlorobium chlorochromatii CaD3]
 gi|115305801|sp|Q3ARF2|SYY_CHLCH RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|78171327|gb|ABB28423.1| tyrosyl-tRNA synthetase [Chlorobium chlorochromatii CaD3]
          Length = 402

 Score =  354 bits (910), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 94/410 (22%), Positives = 172/410 (41%), Gaps = 25/410 (6%)

Query: 11  ILSERGFIHQISNPRELDILCSQ----GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
            L  R  +  IS       L S       +   +G D +   LH GH   L  L   Q  
Sbjct: 11  DLITRNTVEIISVDELEQKLVSSQKSGKPLNIKLGADPSRPDLHLGHSVVLRKLRDFQDL 70

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH  I ++G  T++IGDPS + ++R  + ++E  EN           +       +  + 
Sbjct: 71  GHHAILIIGNFTAMIGDPSGKSKTRPQLSAEEAAENGRSYFEQAIKILD----AANTTLC 126

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           +N  WL ++ + D++R + S ++V RML       R + ++ +S  EF Y + Q  D V 
Sbjct: 127 SNADWLGAMTFADVIR-LSSHYTVARMLERNDFEQRYRAQEPISIHEFLYPLAQGMDSVH 185

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAI 245
           L  +    +++GG+DQ  N++ G DL           +T PLL    G  KM K+L  AI
Sbjct: 186 LKND----VELGGTDQKFNLLVGRDLQREYGIAPQVCITMPLLVGTDGKDKMSKSLDNAI 241

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
                  +P + +    +I D  + ++++ L +   + ++ +          AK+ +A  
Sbjct: 242 SFT---DTPNDMYGRALSIPDTLIETYSRLLLSQFGAALNEILSQIETNPRLAKRAMARH 298

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           I    +  E A  A     + F       ++  + +     +  M ++ L+   G A S 
Sbjct: 299 IVADYYSPEAASAAEEHFDKLFVHKQAPDNLELLELE----ATSMPIIDLLTLLGAAPSK 354

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +EARR +++ ++ I++  I +    I L+         +  GK+      
Sbjct: 355 SEARRMIQAKSVSIDDEKIEDFNAVIALE----GEAKIVRAGKRKFFKIR 400


>gi|190572485|ref|YP_001970330.1| tyrosyl-tRNA synthetase [Stenotrophomonas maltophilia K279a]
 gi|190010407|emb|CAQ44015.1| putative tyrosyl-tRNA synthetase [Stenotrophomonas maltophilia
           K279a]
          Length = 403

 Score =  354 bits (910), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 94/399 (23%), Positives = 163/399 (40%), Gaps = 25/399 (6%)

Query: 25  RELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGD 83
            +L     +G  +    G+D TA  LH GH   L  +   Q  GH+ I L+G  T +IGD
Sbjct: 22  EDLRARLQEGRPLRIKAGFDPTAPDLHLGHTVLLNKMRQFQDLGHQVIFLIGDFTGMIGD 81

Query: 84  PSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLRE 143
           PS +  +R+ +  +++  N    +      +     +    +  N  W   +   D++R 
Sbjct: 82  PSGKSLTRKPLSREDVLANARTYEEQVFKVLDRSRTE----VRFNSEWFGKMGAADMIRL 137

Query: 144 IGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQW 203
            G   +V RML  +    R   +QS++  EF Y ++Q YD V L    +  +++GG+DQ 
Sbjct: 138 AGQH-TVARMLERDDFAKRYAAQQSIAIHEFLYPLVQGYDSVAL----EADVELGGTDQK 192

Query: 204 GNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWR 262
            N++ G  L E         LT PLL    G  KM K+L   I +++      +      
Sbjct: 193 FNLLMGRGLQEHHGQKPQVVLTMPLLEGLDGVNKMSKSLGNYIGISEPA---IDIVTKTM 249

Query: 263 NIDDADVVSFAKRLTT-LPMSE---IDRMAKLQGKEINEAKKIIATEITTMVHGREEAEK 318
            +DD  +  + + L+  +  +E   +       G      K  +A E+ T  H    AE+
Sbjct: 250 KVDDTLMWRWIELLSFDISQAEAVQLREQVANGGLNPRVVKLRLARELATRFHDAAAAEQ 309

Query: 319 AATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIK 378
           A                +P   ++      G+ +  L+  AG   S +EA R LK  A+K
Sbjct: 310 AIAGWEAAVTGQGDITQLPLQDVAIP--VEGLRIAALLTAAGLTPSNSEANRKLKERAVK 367

Query: 379 INNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           ++  ++ + +  ++           L  GK+      L 
Sbjct: 368 VDGEVVEDGQQVLQP-----GFEGLLQVGKRTFARVRLV 401


>gi|50083309|ref|YP_044819.1| tyrosyl-tRNA synthetase [Acinetobacter sp. ADP1]
 gi|81394066|sp|Q6FG10|SYY_ACIAD RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|49529285|emb|CAG66997.1| tyrosyl-tRNA synthetase [Acinetobacter sp. ADP1]
          Length = 404

 Score =  354 bits (910), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 96/412 (23%), Positives = 174/412 (42%), Gaps = 26/412 (6%)

Query: 6   SDFL--SI---LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           S+FL       L +RG    IS    L  L     +    G+D TA  LH GH   +  L
Sbjct: 2   SNFLPAEEQLALIQRGTHEIISEEDLLKKLKENRPLRIKAGFDPTAPDLHLGHTVLINKL 61

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GH+   L+G  T++IGDP+ +  +R  +  ++++ N +  +      +     K
Sbjct: 62  KAFQDLGHEVTFLIGDYTAMIGDPTGKSATRPPLTREQVEANAKTYQEQVFKILDPNKTK 121

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N  W       DL+ ++ S  +V+RML  +    R    Q ++  EF Y ++Q
Sbjct: 122 ----VRFNSEWFNQRTAADLI-QLASQQTVSRMLERDDFTKRYNNHQPIAIHEFLYPLVQ 176

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGK 239
            YD + L    +  +++GG+DQ  N++ G  L  R        +T P+L    G  KM K
Sbjct: 177 GYDSIAL----EADVELGGTDQTFNLLMGRTLQGRYGQESQVCITVPILEGLDGVNKMSK 232

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINE 297
           +L   I +     +P   +Q   ++ D  +  + + L+   + EI         G+   +
Sbjct: 233 SLGNYIGV---FDAPGAMYQKVLSMPDTLIERYFELLSFKSLDEIQGLLDEMANGRNPQD 289

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            KKI+A E+    H  + A  A   A          +  P ++IS+ E    + + +++ 
Sbjct: 290 LKKILALELVERFHDADAAANAHKGAGNIITEGEIPEGTPEVTISRGEFGGEIFIASIVR 349

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
            AG   +  +A+  +   A+K++  ++ +    +K           +  GKK
Sbjct: 350 LAGLTKNAAQAKDAVSRGAVKVDWQVV-DANFSVKE-----NKTYLIQAGKK 395


>gi|312876148|ref|ZP_07736136.1| tyrosyl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A]
 gi|311797134|gb|EFR13475.1| tyrosyl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A]
          Length = 396

 Score =  354 bits (910), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 102/393 (25%), Positives = 181/393 (46%), Gaps = 28/393 (7%)

Query: 29  ILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRD 88
            L     +   +G D     +H GH   L  L  LQ  GH  I ++G  T++IGDP+ + 
Sbjct: 26  KLKQDRPLNIKLGLDPNVPDVHLGHAVVLRKLKQLQDLGHNIILIIGDFTAMIGDPTGKS 85

Query: 89  ESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFF 148
           E+R+ +  +E+Q+N E  K      +          +  N  WL  + ++D++  + S +
Sbjct: 86  ETRKQLTKEEVQKNAEPFKQQVLKILD----PQKTTIRYNSEWLEPMNFLDVI-NLASKY 140

Query: 149 SVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIIC 208
           +V RML  E+ R R+++   LS  EF Y ++Q YD V +    +  +++G ++Q  NI+ 
Sbjct: 141 TVARMLERETFRQRMEKNLPLSIHEFFYPLMQGYDSVVI----EADVELGATEQKFNILM 196

Query: 209 GIDLGERLKTPK-LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDD 266
           G  L +         AL  P+L    G  KM K+L   I +N+    P   +    +I D
Sbjct: 197 GRTLQKEYGCKTIQVALLMPILVGTDGVNKMSKSLGNYIGINE---PPNVMYGKVMSIPD 253

Query: 267 ADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAKKIIATEITTMVHGREEAEKAATAA 323
             ++S+ +  T L   EI+ + +   +      +AK  +A EI  + HG E A KA    
Sbjct: 254 EIMISYYELTTDLEPEEIEEIKRKLEEGTLHPRDAKMRLAREIVKLYHGEEAALKAEEEF 313

Query: 324 MECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSI 383
           ++ F       ++P + +   +V     L   +V+    +ST+E  R +KS A+K+N   
Sbjct: 314 IKVFQKKDIPDNIPEVELESSKV----YLPRFMVENKLCSSTSEGMRLIKSGAVKLNGEK 369

Query: 384 ISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +++  ++++  D        L  GK   +   L
Sbjct: 370 VNDLDIELQNGD-------VLQVGKLKFVKIKL 395


>gi|217076526|ref|YP_002334242.1| tyrosyl-tRNA synthetase [Thermosipho africanus TCF52B]
 gi|217036379|gb|ACJ74901.1| tyrosyl-tRNA synthetase [Thermosipho africanus TCF52B]
          Length = 398

 Score =  354 bits (910), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 96/408 (23%), Positives = 176/408 (43%), Gaps = 26/408 (6%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L IL  +  +  +S    ++ L     +   +G D +   LH GH   L  L   Q+ GH
Sbjct: 7   LEILK-KNVVDFVSEEELVERLKENRPLRVKLGVDPSRPDLHLGHAVVLKKLKQFQELGH 65

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
             I ++G  T+ IGDP+ R+ +R M+  +E+++N E         +     K    +  N
Sbjct: 66  HIILIIGDFTARIGDPTGRNSTRPMLSEEEVRKNAETYANQAFKILD----KEKTEIRFN 121

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             WL  +K+ D+++  G + +V RML  +    RL +   +S  EF Y + QAYD V + 
Sbjct: 122 NEWLGKMKFEDVVKLAGKY-TVARMLERDDFAKRLSQGYPISIAEFLYPLAQAYDSVAIQ 180

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWL 247
            +    +++GG+DQ  N++ G  + E         +T P++    G  KM K+    I  
Sbjct: 181 AD----VELGGTDQLFNLLVGRKIQEEYGQKPQIVMTMPIIEGTDGKLKMSKSYDNYIAF 236

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAKKIIAT 304
             E   P + +    +I D  +  + + +T +  SEI+    L  +      + K  +A 
Sbjct: 237 TDE---PNDMYGKIMSIPDELIAKYMRLITDIEESEIEEYEILMKEGKINPRDVKMRLAR 293

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           EI    + +E+A  A    ++ F        MP I +   E +    ++ L+ K     S
Sbjct: 294 EIVAFFYDKEKARMAEENFVKVFRQKEIPDEMPEIQVEPGEYN----IVDLVTKVNSNYS 349

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
            +E +R +    +  +   +++ K  +K++         L  GK+   
Sbjct: 350 KSEVKRLISQGGVYFDGKRVNDFKQIVKVE-----KEHVLRLGKRKFF 392


>gi|86153123|ref|ZP_01071328.1| tyrosyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           HB93-13]
 gi|157415535|ref|YP_001482791.1| tyrosyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81116]
 gi|85844008|gb|EAQ61218.1| tyrosyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           HB93-13]
 gi|157386499|gb|ABV52814.1| tyrosyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81116]
 gi|307748175|gb|ADN91445.1| Tyrosyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni M1]
 gi|315932421|gb|EFV11364.1| tyrosyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 327]
          Length = 401

 Score =  354 bits (910), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 108/422 (25%), Positives = 183/422 (43%), Gaps = 36/422 (8%)

Query: 7   DFLSILSE--RGFIHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLML 59
           D   IL+E  RG   ++ +   ++ L               G+D TA  LH GH   L  
Sbjct: 2   DIKKILAEVKRGC-AELIDEERIENLIKNYYEKGENFFIKAGFDPTAPDLHLGHSVVLTK 60

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG 119
           + +LQK G     L+G  T  IGDPS +  +R+ +  +++  N +  +      +     
Sbjct: 61  MAFLQKHGAIVQFLIGDFTGQIGDPSGKSATRKKLDKEQVLINAKTYETQVFKVLD---- 116

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
           K    +  N TWL  +     + E+ S FSV RML  +    R K +  +S  EF Y +L
Sbjct: 117 KEKTQIKFNSTWLNELGAAG-IVELTSTFSVARMLERDDFTKRFKEQSPISICEFLYPLL 175

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASGT-KM 237
           Q YD V L  +    ++MGG+DQ  N++ G  L        +   +  PLL    G  KM
Sbjct: 176 QGYDSVALKSD----IEMGGTDQKFNLLMGRQLQRVYNIGKEQAVIMMPLLEGLDGVNKM 231

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK---LQGKE 294
            K+L+  I + ++     + +    +I D  +  + + L+   + EI ++ K        
Sbjct: 232 SKSLNNYIGVTEKAN---DMYAKILSISDELMFRYYELLSQKSLEEIAQIKKDIEQGNLH 288

Query: 295 INEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLT 354
             +AK+ +A EIT   H +EEA  A +        +     M    I        + L  
Sbjct: 289 PKKAKENLALEITERFHSKEEANNAKSEFDRIHSQNALPSDMAEFEI-----QGKIWLAK 343

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +V+ G  +ST+ ARR + +NA+ +N+  +S+E++ ++       G   L  GK+     
Sbjct: 344 ALVECGLESSTSAARRSISANAVSVNSQKVSDEQMHLEQ------GEYILQIGKRKFAKL 397

Query: 415 HL 416
            +
Sbjct: 398 KV 399


>gi|145298222|ref|YP_001141063.1| tyrosyl-tRNA synthetase [Aeromonas salmonicida subsp. salmonicida
           A449]
 gi|142850994|gb|ABO89315.1| tyrosyl-tRNA synthetase [Aeromonas salmonicida subsp. salmonicida
           A449]
          Length = 399

 Score =  354 bits (910), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 95/420 (22%), Positives = 176/420 (41%), Gaps = 26/420 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M   +     I  +RG    +     +  L     +   +G D TA  +H GH   L  L
Sbjct: 1   MSQLEVALAEI--KRGAEEILVEEELVAKLKEGRPLRIKLGMDPTAPDIHLGHTVILNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GH+ I L+G  T+++GDPS ++ +R  +  + I+ N           +     +
Sbjct: 59  KTFQDLGHEIILLIGDFTAMVGDPSGKNSTRPPLSEEAIKHNALTYAEQAFKILDPAKTR 118

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N +WL  +    +++ + +  +V RM+  +  + R    QS++  EF Y +LQ
Sbjct: 119 ----IEYNSSWLGELGATGMIK-LAAKQTVARMMERDDFKKRYTGGQSIAIHEFLYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGK 239
            YD V L  +    +++GG+DQ  N++ G +L +         L  PLL    G  KM K
Sbjct: 174 GYDSVALKAD----VELGGTDQKFNLLMGRELQKDAGMAAQCVLMMPLLVGLDGVKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEIN 296
           + +  I ++    +P   +    +I D  + ++ + L++ P++EI+              
Sbjct: 230 SAANYIGVH---DAPGEMFGKIMSITDDLMWNYYELLSSRPLAEIEEFKAGIAANTLNPR 286

Query: 297 EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLI 356
           + K  +A EI    H    AE A     + F  +     MP + ++ +    G+ +  L+
Sbjct: 287 DVKIWLAKEIIARYHDEAAAEAAHEDFTQRFSKNAIPDEMPEVELALE--GDGLAIANLL 344

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             A    +T+EA R +K  A+K +   + + K  +       TG      GK+      +
Sbjct: 345 KDADLVATTSEALRMIKQGAVKRDGEKLEDGKALV------GTGTAVYQVGKRKFARVTV 398


>gi|323306996|gb|EGA60280.1| Msy1p [Saccharomyces cerevisiae FostersO]
          Length = 492

 Score =  354 bits (910), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 131/439 (29%), Positives = 198/439 (45%), Gaps = 31/439 (7%)

Query: 7   DFLSILSERGFIHQISNPRE-LDILCS-QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           + L  L +RG + Q++ P   L    +    +  Y G D TA SLH G+L  LM+L    
Sbjct: 55  NILDELKQRGLVSQVTQPESFLRTKLNGNDKIKLYCGVDPTAQSLHLGNLVPLMVLLHFY 114

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT------ 118
             GH  ++++GG T  +GDPS R   R +M +   Q N+  I      F K G       
Sbjct: 115 VKGHDIVTVIGGATGKVGDPSGRKTERDVMENDIRQNNVTSISQQLQRFFKNGLEYYRNR 174

Query: 119 -------GKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSF 171
                          NN  W   IK +D L + G    V  ML+ +S+ SRL+ +  L F
Sbjct: 175 CALTEDVPSGKYTPRNNFNWWKDIKMLDFLADFGRHIRVQSMLARDSISSRLQTKNGLGF 234

Query: 172 LEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL----GERLKTPKLFALTSP 227
            EF Y +LQAYDF  L K  +  +Q+GG+DQWGNI  GIDL             F +T P
Sbjct: 235 NEFTYQVLQAYDFYHLYKEENVTIQVGGNDQWGNITAGIDLINRIQPIKNKGLPFGITVP 294

Query: 228 LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM 287
           LLTTA+G K GK+   A++++  + + Y+ +Q++ N  DADV  F K  T L  SEI ++
Sbjct: 295 LLTTATGEKFGKSAGNAVFIDPSINTAYDVYQFFYNTLDADVPKFLKIFTFLNSSEIKKI 354

Query: 288 AKLQGKEI--NEAKKIIATEITTMVHGREEAEKAATAAMECFDM-SIHSQHMPTISISKD 344
            +   K       + ++A E+T M++G      +   +   F            + + K 
Sbjct: 355 VETHIKSPSLRYGQTLLAKEVTDMLYGVGSGSDSEALSNIIFGRYDGTLSAAKLVDLCKK 414

Query: 345 E-----VSRGMGLLTLIVKAGFAT-STNEARRHLKSNAIKINNSIIS-NEKLQIKLQDFD 397
                   R + L+ LI        S +EARR L   ++ +++S    NE +        
Sbjct: 415 ARILQYADREIDLIKLI--CKLVNCSVSEARRKLSQGSVYLHHSKSKVNENISNLAPFLI 472

Query: 398 STGNIKLSFGKKNHIICHL 416
               + L  GK+   I  +
Sbjct: 473 DDRVLILRIGKQKCFIIEM 491


>gi|283956666|ref|ZP_06374145.1| tyrosyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1336]
 gi|283791915|gb|EFC30705.1| tyrosyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1336]
          Length = 401

 Score =  354 bits (910), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 108/422 (25%), Positives = 183/422 (43%), Gaps = 36/422 (8%)

Query: 7   DFLSILSE--RGFIHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLML 59
           D   IL+E  RG   ++ +   ++ L               G+D TA  LH GH   L  
Sbjct: 2   DIKKILAEVKRGC-AELIDEERIENLIKNYYEKGENFFIKAGFDPTAPDLHLGHSVVLTK 60

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG 119
           + +LQK G     L+G  T  IGDPS +  +R+ +  +++  N +  +      +     
Sbjct: 61  MAFLQKHGAIVQFLIGDFTGQIGDPSGKSATRKKLDKEQVLINAKTYETQVFKVLD---- 116

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
           K    +  N TWL  +     + E+ S FSV RML  +    R K +  +S  EF Y +L
Sbjct: 117 KEKTQIKFNSTWLNELGAAG-IVELTSTFSVARMLERDDFTKRFKEQSPISICEFLYPLL 175

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASGT-KM 237
           Q YD V L  +    ++MGG+DQ  N++ G  L        +   +  PLL    G  KM
Sbjct: 176 QGYDSVALKSD----IEMGGTDQKFNLLMGRQLQRVYNIGKEQAVIMMPLLEGLDGVNKM 231

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK---LQGKE 294
            K+L+  I + ++     + +    +I D  +  + + L+   + EI ++ K        
Sbjct: 232 SKSLNNYIGVTEKAN---DMYAKILSISDELMFRYYELLSQKSLEEIAQIKKDIEQGNLH 288

Query: 295 INEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLT 354
             +AK+ +A EIT   H +EEA  A +        +     M    I        + L  
Sbjct: 289 PKKAKENLALEITERFHSKEEANNAKSEFDRIHSQNALPSDMAEFEI-----QGKIWLAK 343

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +V+ G  +ST+ ARR + +NA+ +N+  +S+E++ ++       G   L  GK+     
Sbjct: 344 ALVECGLESSTSAARRSISANAVSVNSQKVSDEQMHLER------GEYILQIGKRKFAKL 397

Query: 415 HL 416
            +
Sbjct: 398 KV 399


>gi|194364078|ref|YP_002026688.1| tyrosyl-tRNA synthetase [Stenotrophomonas maltophilia R551-3]
 gi|194346882|gb|ACF50005.1| tyrosyl-tRNA synthetase [Stenotrophomonas maltophilia R551-3]
          Length = 403

 Score =  354 bits (910), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 94/399 (23%), Positives = 163/399 (40%), Gaps = 25/399 (6%)

Query: 25  RELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGD 83
            +L     +G  +    G+D TA  LH GH   L  +   Q  GH+ I L+G  T +IGD
Sbjct: 22  EDLRARLQEGRPLRIKAGFDPTAPDLHLGHTVLLNKMRQFQDLGHQVIFLIGDFTGMIGD 81

Query: 84  PSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLRE 143
           PS +  +R+ +   ++  N    +      +     +    +  N  W   +   D++R 
Sbjct: 82  PSGKSLTRKPLSKDDVLANARTYEEQVFKVLDRSRTE----VRFNSEWFGKMGAADMIRL 137

Query: 144 IGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQW 203
            G   +V RML  +    R   +QS++  EF Y ++Q YD V L    +  +++GG+DQ 
Sbjct: 138 AGQH-TVARMLERDDFAKRYAAQQSIAIHEFLYPLVQGYDSVAL----EADVELGGTDQK 192

Query: 204 GNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWR 262
            N++ G  L E         LT PLL    G  KM K+L   I +++      +      
Sbjct: 193 FNLLMGRGLQEHHGQKPQVVLTMPLLEGLDGVNKMSKSLGNYIGISEPA---IDIVTKTM 249

Query: 263 NIDDADVVSFAKRLTT-LPMSE---IDRMAKLQGKEINEAKKIIATEITTMVHGREEAEK 318
            +DD  +  + + L+  +  +E   +       G      K  +A E+ T  H    AE+
Sbjct: 250 KVDDTLMWRWIELLSFDISQAEAVQLREQVANGGLNPRVVKLRLARELATRFHDAAAAEQ 309

Query: 319 AATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIK 378
           A                +P   ++    + G+ +  L+  AG   S +EA R LK  A+K
Sbjct: 310 AVAGWEAAVTGQGDITQLPLQDVAIP--AEGLRIAALLTAAGLTPSNSEANRKLKERAVK 367

Query: 379 INNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           ++  ++ + +  ++           L  GK+      L 
Sbjct: 368 VDGEVVEDGQQVLQP-----GFEGLLQVGKRTFARVRLV 401


>gi|86150966|ref|ZP_01069182.1| tyrosyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 260.94]
 gi|315124728|ref|YP_004066732.1| tyrosyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
 gi|85842136|gb|EAQ59382.1| tyrosyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 260.94]
 gi|315018450|gb|ADT66543.1| tyrosyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
          Length = 401

 Score =  354 bits (909), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 108/422 (25%), Positives = 183/422 (43%), Gaps = 36/422 (8%)

Query: 7   DFLSILSE--RGFIHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLML 59
           D   IL+E  RG   ++ +   ++ L               G+D TA  LH GH   L  
Sbjct: 2   DIKKILAEVKRGC-AELIDEERIENLIKNYYEKGENFFIKAGFDPTAPDLHLGHSVVLTK 60

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG 119
           + +LQK G     L+G  T  IGDPS +  +R+ +  +++  N +  +      +     
Sbjct: 61  MAFLQKHGAIVQFLIGDFTGQIGDPSGKSATRKKLDKEQVLINAKTYETQVFKVLD---- 116

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
           K    +  N TWL  +     + E+ S FSV RML  +    R K +  +S  EF Y +L
Sbjct: 117 KEKTQIKFNSTWLNELGAAG-IVELTSTFSVARMLERDDFTKRFKEQSPISICEFLYPLL 175

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASGT-KM 237
           Q YD V L  +    ++MGG+DQ  N++ G  L        +   +  PLL    G  KM
Sbjct: 176 QGYDSVALKSD----IEMGGTDQKFNLLMGRQLQRVYNIGKEQAVIMMPLLEGLDGVNKM 231

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK---LQGKE 294
            K+L+  I + ++     + +    +I D  +  + + L+   + EI ++ K        
Sbjct: 232 SKSLNNYIGVTEKAN---DMYAKILSISDELMFRYYELLSQKSLEEIAQIKKDIEQGNLH 288

Query: 295 INEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLT 354
             +AK+ +A EIT   H +EEA  A +        +     M    I        + L  
Sbjct: 289 PKKAKENLALEITERFHSKEEANNAKSEFDRIHSQNALPSDMAEFEI-----QGKIWLAK 343

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +V+ G  +ST+ ARR + +NA+ +N+  +S+E++ ++       G   L  GK+     
Sbjct: 344 ALVECGLESSTSAARRSISANAVSVNSQKVSDEQMYLEQ------GEYILQIGKRKFAKL 397

Query: 415 HL 416
            +
Sbjct: 398 KV 399


>gi|121613329|ref|YP_001000947.1| tyrosyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81-176]
 gi|167005857|ref|ZP_02271615.1| tyrosyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81-176]
 gi|87249722|gb|EAQ72681.1| tyrosyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81-176]
          Length = 401

 Score =  354 bits (909), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 108/422 (25%), Positives = 183/422 (43%), Gaps = 36/422 (8%)

Query: 7   DFLSILSE--RGFIHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLML 59
           D   IL+E  RG   ++ +   ++ L               G+D TA  LH GH   L  
Sbjct: 2   DIKKILAEVKRGC-AELIDEERIENLIKNYYEKGENFFIKAGFDPTAPDLHLGHSVVLTK 60

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG 119
           + +LQK G     L+G  T  IGDPS +  +R+ +  +++  N +  +      +     
Sbjct: 61  MAFLQKHGAIVQFLIGDFTGQIGDPSGKSATRKKLDKEQVLINAKTYETQVFKVLD---- 116

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
           K    +  N TWL  +     + E+ S FSV RML  +    R K +  +S  EF Y +L
Sbjct: 117 KEKTQIKFNSTWLNELGAAG-IVELTSTFSVARMLERDDFTKRFKEQSPISICEFLYPLL 175

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASGT-KM 237
           Q YD V L  +    ++MGG+DQ  N++ G  L        +   +  PLL    G  KM
Sbjct: 176 QGYDSVALKSD----IEMGGTDQKFNLLMGRQLQRVYNIGKEQAVIMMPLLEGLDGVNKM 231

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK---LQGKE 294
            K+L+  I + ++     + +    +I D  +  + + L+   + EI ++ K        
Sbjct: 232 SKSLNNYIGVTEKAN---DMYAKILSISDELMFRYYELLSQKSLEEIAQIKKDIEQGNLH 288

Query: 295 INEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLT 354
             +AK+ +A EIT   H +EEA  A +        +     M    I        + L  
Sbjct: 289 PKKAKENLALEITEHFHSKEEANNAKSEFDRIHSQNALPSDMAEFEI-----QGKIWLAK 343

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +V+ G  +ST+ ARR + +NA+ +N+  +S+E++ ++       G   L  GK+     
Sbjct: 344 ALVECGLESSTSAARRSISANAVSVNSQKVSDEQMHLEQ------GEYILQIGKRKFAKL 397

Query: 415 HL 416
            +
Sbjct: 398 KV 399


>gi|86150053|ref|ZP_01068281.1| tyrosyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CF93-6]
 gi|88596533|ref|ZP_01099770.1| tyrosyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 84-25]
 gi|218562883|ref|YP_002344662.1| tyrosyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni NCTC
           11168]
 gi|81549167|sp|Q9PN27|SYY_CAMJE RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|85839499|gb|EAQ56760.1| tyrosyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CF93-6]
 gi|88191374|gb|EAQ95346.1| tyrosyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 84-25]
 gi|112360589|emb|CAL35386.1| tyrosyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni NCTC
           11168]
 gi|284926496|gb|ADC28848.1| tyrosyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni IA3902]
 gi|315927103|gb|EFV06454.1| tyrosyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           DFVF1099]
 gi|315929604|gb|EFV08788.1| tyrosyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 305]
          Length = 401

 Score =  354 bits (908), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 109/422 (25%), Positives = 183/422 (43%), Gaps = 36/422 (8%)

Query: 7   DFLSILSE--RGFIHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLML 59
           D   IL+E  RG   ++ +   ++ L               G+D TA  LH GH   L  
Sbjct: 2   DIKKILAEVKRGC-AELIDEERIENLIKNYYEKGENFFIKAGFDPTAPDLHLGHSVVLTK 60

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG 119
           + +LQK G     L+G  T  IGDPS +  +R+ +  +++  N +  K      +     
Sbjct: 61  MAFLQKHGAIVQFLIGDFTGQIGDPSGKSATRKKLDKEQVLINAKTYKTQVFKVLD---- 116

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
           K    +  N TWL  +     + E+ S FSV RML  +    R K +  +S  EF Y +L
Sbjct: 117 KEKTQIKFNSTWLNELGAAG-IVELTSTFSVARMLERDDFTKRFKEQSPISICEFLYPLL 175

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASGT-KM 237
           Q YD V L  +    ++MGG+DQ  N++ G  L        +   +  PLL    G  KM
Sbjct: 176 QGYDSVALKSD----IEMGGTDQKFNLLMGRQLQRVYNIGKEQAVIMMPLLEGLDGVNKM 231

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK---LQGKE 294
            K+L+  I + ++     + +    +I D  +  + + L+   + EI ++ K        
Sbjct: 232 SKSLNNYIGVTEKAN---DMYAKILSISDELMFRYYELLSQKSLEEIAQIKKDIEQGNLH 288

Query: 295 INEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLT 354
             +AK+ +A EIT   H +EEA  A +        +     M    I        + L  
Sbjct: 289 PKKAKENLALEITERFHSKEEANNAKSEFDRIHSQNALPSDMAEFEI-----QGKIWLAK 343

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +V+ G  +ST+ ARR + +NA+ +N+  +S+E++ ++       G   L  GK+     
Sbjct: 344 ALVECGLESSTSAARRSISANAVSVNSQKVSDEQMYLEQ------GEYILQIGKRKFAKL 397

Query: 415 HL 416
            +
Sbjct: 398 KV 399


>gi|325282260|ref|YP_004254801.1| Tyrosyl-tRNA synthetase [Deinococcus proteolyticus MRP]
 gi|324314069|gb|ADY25184.1| Tyrosyl-tRNA synthetase [Deinococcus proteolyticus MRP]
          Length = 414

 Score =  354 bits (908), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 97/429 (22%), Positives = 179/429 (41%), Gaps = 29/429 (6%)

Query: 1   MPAFKSDF-----LSILSERGFIHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLH 50
           M   + +      LSIL  RG +  + +  +L    S+       +   +G D T   LH
Sbjct: 1   MTEIRPNLPVDEQLSILK-RGVV-DLVSEEDLRQKLSRSLETGQPLRVKLGADPTRPDLH 58

Query: 51  AGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIF 110
            GH   L  +   Q  GHK I L+G  T+ IGDP+ + ++R  +  +E + N +      
Sbjct: 59  LGHAVILRKMRQFQDLGHKVIMLIGDFTATIGDPTGKSKTRPPLTIEEARANAQSYLEQC 118

Query: 111 SSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLS 170
              ++  +      + +N  WL  + Y D++  + + ++V R+L  +    RL     +S
Sbjct: 119 RLILR--SEPEVLEIRSNGEWLEQLGYKDIIG-LTAKYTVARILERDDFSKRLSAGTPIS 175

Query: 171 FLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLT 230
             E  Y + Q YD V L    +  +++GG+DQ  N + G  L           +T PLL 
Sbjct: 176 MHELLYPLTQGYDSVAL----EADVELGGTDQLFNNLVGRALQRDYGQEPQVVMTLPLLV 231

Query: 231 TASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK 289
              GT KM K+L   I ++ E   P+  +     + D  + ++   LT LP   ID    
Sbjct: 232 GLDGTEKMSKSLDNYIGISDE---PHAIFAGLMKVPDPLLANYFTLLTDLPQERIDE--- 285

Query: 290 LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG 349
           L      EA +++A E+   +    + + A                +P + +   E++  
Sbjct: 286 LVAGHPVEAHRVLAREVLVWLAPGADPDAAEERFRSV-AKGGIPDDLPEVVVDAAELNDE 344

Query: 350 --MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFG 407
             + +  L+V AG   S   AR+ +++  +K++    ++ +  ++ +     G + L  G
Sbjct: 345 GRVSMARLVVLAGLEPSNGAARKLIQNRGLKVSGEAYTDAQGWVEREQLCMEGGLILQKG 404

Query: 408 KKNHIICHL 416
           K       +
Sbjct: 405 KDKFKRLKM 413


>gi|207340573|gb|EDZ68882.1| YPL097Wp-like protein [Saccharomyces cerevisiae AWRI1631]
          Length = 492

 Score =  354 bits (908), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 132/439 (30%), Positives = 198/439 (45%), Gaps = 31/439 (7%)

Query: 7   DFLSILSERGFIHQISNPRE-LDILCS-QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           + L  L +RG + Q+S P   L    +    +  Y G D TA SLH G+L  LM+L    
Sbjct: 55  NILDELKQRGLVSQVSQPESFLRTKLNGNDKIKLYCGVDPTAQSLHLGNLVPLMVLLHFY 114

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT------ 118
             GH  ++++GG T  +GDPS R   R +M +   Q N+  I      F K G       
Sbjct: 115 VKGHDIVTVIGGATGKVGDPSGRKTERDVMENDIRQSNVASISQQLQRFFKNGLEYYRNR 174

Query: 119 -------GKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSF 171
                          NN  W   IK +D L + G    V  ML+ +S+ SRL+ +  L F
Sbjct: 175 CALTEDVPSGKYTPRNNFNWWKDIKMLDFLADFGRHIRVQSMLARDSISSRLQTKNGLGF 234

Query: 172 LEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL----GERLKTPKLFALTSP 227
            EF Y +LQAYDF  L K  +  +Q+GG+DQWGNI  GIDL             F +T P
Sbjct: 235 NEFTYQVLQAYDFYHLYKEENVTIQVGGNDQWGNITAGIDLINRIQPIKNKGLPFGITVP 294

Query: 228 LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM 287
           LLTTA+G K GK+   A++++  + + Y+ +Q++ N  DADV  F K  T L  SEI ++
Sbjct: 295 LLTTATGEKFGKSAGNAVFIDPSINTAYDVYQFFYNTLDADVPKFLKIFTFLNSSEIKKI 354

Query: 288 AKLQGKEI--NEAKKIIATEITTMVHGREEAEKAATAAMECFDM-SIHSQHMPTISISKD 344
            +   K       + ++A E+T M++G      +   +   F            + + K 
Sbjct: 355 VETHIKSPSLRYGQTLLAKEVTDMLYGVGSGSDSEALSNIIFGRYDGTLSAAKLVDLCKK 414

Query: 345 E-----VSRGMGLLTLIVKAGFAT-STNEARRHLKSNAIKINNSIIS-NEKLQIKLQDFD 397
                   R + L+ LI        S +EARR L   ++ +++S    NE +        
Sbjct: 415 ARILQYADREIDLIKLI--CKLVNCSVSEARRKLSQGSVYLHHSKSKVNENISNLAPFLI 472

Query: 398 STGNIKLSFGKKNHIICHL 416
               + L  GK+   I  +
Sbjct: 473 DDRVLILRIGKQKCFIIEM 491


>gi|254524608|ref|ZP_05136663.1| tyrosyl-tRNA synthetase [Stenotrophomonas sp. SKA14]
 gi|219722199|gb|EED40724.1| tyrosyl-tRNA synthetase [Stenotrophomonas sp. SKA14]
          Length = 403

 Score =  354 bits (908), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 94/399 (23%), Positives = 163/399 (40%), Gaps = 25/399 (6%)

Query: 25  RELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGD 83
            +L     +G  +    G+D TA  LH GH   L  +   Q  GH+ I L+G  T +IGD
Sbjct: 22  EDLRARLQEGRPLRIKAGFDPTAPDLHLGHTVLLNKMRQFQDLGHQVIFLIGDFTGMIGD 81

Query: 84  PSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLRE 143
           PS +  +R+ +  +++  N    +      +     +    +  N  W   +   D++R 
Sbjct: 82  PSGKSLTRKPLSREDVLANARTYEEQVFKVLDRSRTE----VRFNSEWFGKMGAADMIRL 137

Query: 144 IGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQW 203
            G   +V RML  +    R   +QS++  EF Y ++Q YD V L    +  +++GG+DQ 
Sbjct: 138 AGQH-TVARMLERDDFAKRYAAQQSIAIHEFLYPLVQGYDSVAL----EADVELGGTDQK 192

Query: 204 GNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWR 262
            N++ G  L E         LT PLL    G  KM K+L   I +++      +      
Sbjct: 193 FNLLMGRGLQEHHGQKPQVVLTMPLLEGLDGVNKMSKSLGNYIGISEPA---IDIVTKTM 249

Query: 263 NIDDADVVSFAKRLTT-LPMSE---IDRMAKLQGKEINEAKKIIATEITTMVHGREEAEK 318
            +DD  +  + + L+  +  +E   +       G      K  +A E+ T  H    AE+
Sbjct: 250 KVDDTLMWRWIELLSFDISQAEAVQLREQVATGGLNPRVVKLRLARELATRFHDAAAAEQ 309

Query: 319 AATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIK 378
           A                +P   ++    + G+ +  L+  AG   S +EA R LK  A+K
Sbjct: 310 AIAGWEAAVTGQGDITQLPLQDVAIP--AEGLRIAALLTAAGLTPSNSEANRKLKERAVK 367

Query: 379 INNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           ++  ++ + +  +            L  GK+      L 
Sbjct: 368 VDGDVVEDGQQVL-----LPGFEGLLQVGKRTFARVRLV 401


>gi|52079102|ref|YP_077893.1| tyrosyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|52784468|ref|YP_090297.1| tyrosyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|319647125|ref|ZP_08001350.1| tyrosyl-tRNA synthetase 2 [Bacillus sp. BT1B_CT2]
 gi|81666957|sp|Q65MW0|SYY2_BACLD RecName: Full=Tyrosyl-tRNA synthetase 2; AltName:
           Full=Tyrosine--tRNA ligase 2; Short=TyrRS 2
 gi|52002313|gb|AAU22255.1| tyrosyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|52346970|gb|AAU39604.1| TyrZ [Bacillus licheniformis ATCC 14580]
 gi|317390772|gb|EFV71574.1| tyrosyl-tRNA synthetase 2 [Bacillus sp. BT1B_CT2]
          Length = 417

 Score =  353 bits (907), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 88/407 (21%), Positives = 174/407 (42%), Gaps = 29/407 (7%)

Query: 19  HQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
            ++  P EL    ++       +   +G D +A  +H GH   L  L   Q+ GH    L
Sbjct: 29  EEVIPPEELRAKLAKSILTGEPLKIKLGLDPSAPDVHLGHTVVLNKLRQFQENGHIVQLL 88

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
           +G  T  IGDP+ +  +R+ +  +E++ N E     F   +     +    +  N  WL 
Sbjct: 89  IGDFTGKIGDPTGKSAARKQLTDEEVRRNAETYFQQFGKVLD----QNKVELHYNSKWLK 144

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDC 193
            +   D++ E+    +V R++  +    R+  ++ +S  EF Y ++Q YD V L  +   
Sbjct: 145 RLTLEDVI-ELAGKITVARLMERDDFEERIAMQKPISLHEFFYPLMQGYDSVVLDSD--- 200

Query: 194 RLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMT 252
            +++GG+DQ  N++ G    E+    K   +  PLL    G  KM K+ +  I ++++  
Sbjct: 201 -IELGGTDQHFNVLMGRHFQEKYGKEKQVVILMPLLEGLDGIEKMSKSKNNYIGIDED-- 257

Query: 253 SPYNFWQYWRNIDDADVVSFAKRLTTLPMSE---IDRMAKLQGKEINEAKKIIATEITTM 309
            P+  +    ++ D+ +  +    T L   E   + +  +       +AK ++   I  M
Sbjct: 258 -PHEMFGKTMSLPDSLMKKYIHLATDLEAEEKKRLVKDLETGAVHPRDAKMLLGKTIVNM 316

Query: 310 VHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEAR 369
            HG + AE A     + F  +    ++   +    +    + +  L+V      S +EAR
Sbjct: 317 YHGSKAAEAAEQQFKKVFQQNSAPDNI---TAVHWQGGGTVPVTDLLVTLELLPSKSEAR 373

Query: 370 RHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           R +++  +KIN +   +    I L+       + +  GK+  +   +
Sbjct: 374 RMIQNGGVKINGAKAESIHADIALEH-----GMIIQVGKRKFVKLQM 415


>gi|219667597|ref|YP_002458032.1| tyrosyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2]
 gi|219537857|gb|ACL19596.1| tyrosyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2]
          Length = 410

 Score =  353 bits (907), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 97/400 (24%), Positives = 172/400 (43%), Gaps = 29/400 (7%)

Query: 23  NPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGG 77
           N  EL    ++       +   +G D +A  +H GH   L  +  LQ  GH+ + ++G  
Sbjct: 20  NAEELKNKLAESHKNRRPLVIKLGLDPSAPDIHLGHAVVLRKIKQLQDLGHEAVIVIGDF 79

Query: 78  TSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKY 137
           T  IGDPS + + R  +  ++++EN           +     K    +  N  WL  + +
Sbjct: 80  TGKIGDPSGKAKGRTALSDEQVKENARTYFEQIFKVLD----KEKTTVRYNSEWLSKLNF 135

Query: 138 IDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQM 197
            D+L+ + +  +V RML  +  + R      +   EF Y ++QAYD V L  +    +++
Sbjct: 136 EDVLK-LAATTTVARMLERDDFQKRFSGNVPIGIHEFFYPLMQAYDSVALQTD----IEL 190

Query: 198 GGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYN 256
           GG+DQ  NI+ G  L + +  P+  A+  PLL    G  KM K+L   I + +       
Sbjct: 191 GGTDQTFNILMGRTLQKAMGQPQQIAMFMPLLEGLDGVEKMSKSLGNYIGVYEPAPV--- 247

Query: 257 FWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEITTMVHGRE 314
            ++    + D  ++ + +  T      I+  R+   QGK   + K  +A  IT + H  +
Sbjct: 248 MFKKVMEVPDPLILKYFELATDEHPDRIEAFRVELAQGKNPRDVKYALAEIITRLYHTEQ 307

Query: 315 EAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKS 374
           +   A       F        +P + +     SR + L+ L+V++GF  S  E RR ++ 
Sbjct: 308 DVMTAKAYYEAAFSKKAIPAQLPVLPVKAR--SRLIELVPLLVQSGFTASNGEFRRLVQQ 365

Query: 375 NAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
             +++N   IS+    +   D        L  GKK  +  
Sbjct: 366 GGVQLNQQKISDLDRVLADGD-------VLKIGKKCFVKI 398


>gi|6325160|ref|NP_015228.1| Msy1p [Saccharomyces cerevisiae S288c]
 gi|1351184|sp|P48527|SYYM_YEAST RecName: Full=Tyrosyl-tRNA synthetase, mitochondrial; AltName:
           Full=Tyrosine--tRNA ligase; Short=TyrRS; Flags:
           Precursor
 gi|825503|gb|AAA67122.1| tyrosyl-tRNA synthetase [Saccharomyces cerevisiae]
 gi|1151229|gb|AAB68202.1| Msy1p: encodes a mitochondrial tyrosyl-tRNA synthetase
           [Saccharomyces cerevisiae]
 gi|151942699|gb|EDN61045.1| mitochondrial tyrosyl-tRNA synthetase [Saccharomyces cerevisiae
           YJM789]
 gi|190407858|gb|EDV11123.1| tyrosine-tRNA ligase [Saccharomyces cerevisiae RM11-1a]
 gi|285815443|tpg|DAA11335.1| TPA: Msy1p [Saccharomyces cerevisiae S288c]
          Length = 492

 Score =  353 bits (907), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 132/439 (30%), Positives = 198/439 (45%), Gaps = 31/439 (7%)

Query: 7   DFLSILSERGFIHQISNPRE-LDILCS-QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           + L  L +RG + Q+S P   L    +    +  Y G D TA SLH G+L  LM+L    
Sbjct: 55  NILDELKQRGLVSQVSQPESFLRTKLNGNDKIKLYCGVDPTAQSLHLGNLVPLMVLLHFY 114

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT------ 118
             GH  ++++GG T  +GDPS R   R +M +   Q N+  I      F K G       
Sbjct: 115 VKGHDIVTVIGGATGKVGDPSGRKTERDVMENDIRQSNVASISQQLQRFFKNGLEYYRNR 174

Query: 119 -------GKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSF 171
                          NN  W   IK +D L + G    V  ML+ +S+ SRL+ +  L F
Sbjct: 175 CALTEDVPSGKYTPRNNFNWWKDIKMLDFLADFGRHIRVQSMLARDSISSRLQTKNGLGF 234

Query: 172 LEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL----GERLKTPKLFALTSP 227
            EF Y +LQAYDF  L K  +  +Q+GG+DQWGNI  GIDL             F +T P
Sbjct: 235 NEFTYQVLQAYDFYHLYKEENVTIQVGGNDQWGNITAGIDLINRIQPIKNKGLPFGITVP 294

Query: 228 LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM 287
           LLTTA+G K GK+   A++++  + + Y+ +Q++ N  DADV  F K  T L  SEI ++
Sbjct: 295 LLTTATGEKFGKSAGNAVFIDPSINTAYDVYQFFYNTLDADVPKFLKIFTFLNSSEIKKI 354

Query: 288 AKLQGKEI--NEAKKIIATEITTMVHGREEAEKAATAAMECFDM-SIHSQHMPTISISKD 344
            +   K       + ++A E+T M++G      +   +   F            + + K 
Sbjct: 355 VETHIKSPSLRYGQTLLAKEVTDMLYGVGSGSDSEALSNIIFGRYDGTLSAAKLVDLCKK 414

Query: 345 E-----VSRGMGLLTLIVKAGFAT-STNEARRHLKSNAIKINNSIIS-NEKLQIKLQDFD 397
                   R + L+ LI        S +EARR L   ++ +++S    NE +        
Sbjct: 415 ARILQYADREIDLIKLI--CKLVNCSVSEARRKLSQGSVYLHHSKSKVNENISNLAPFLI 472

Query: 398 STGNIKLSFGKKNHIICHL 416
               + L  GK+   I  +
Sbjct: 473 DDRVLILRIGKQKCFIIEM 491


>gi|323331216|gb|EGA72634.1| Msy1p [Saccharomyces cerevisiae AWRI796]
          Length = 503

 Score =  353 bits (907), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 132/440 (30%), Positives = 198/440 (45%), Gaps = 31/440 (7%)

Query: 7   DFLSILSERGFIHQISNPRE-LDILCS-QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           + L  L +RG + Q+S P   L    +    +  Y G D TA SLH G+L  LM+L    
Sbjct: 55  NILDELKQRGLVSQVSQPESFLRTKLNGNDKIKLYCGVDPTAQSLHLGNLVPLMVLLHFY 114

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT------ 118
             GH  ++++GG T  +GDPS R   R +M +   Q N+  I      F K G       
Sbjct: 115 VKGHDIVTVIGGATGKVGDPSGRKTERDVMENDIRQSNVASISQQLQRFFKNGLEYYRNR 174

Query: 119 -------GKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSF 171
                          NN  W   IK +D L + G    V  ML+ +S+ SRL+ +  L F
Sbjct: 175 CALTEDVPSGKYTPRNNFNWWKDIKMLDFLADFGRHIRVQSMLARDSISSRLQTKNGLGF 234

Query: 172 LEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL----GERLKTPKLFALTSP 227
            EF Y +LQAYDF  L K  +  +Q+GG+DQWGNI  GIDL             F +T P
Sbjct: 235 NEFTYQVLQAYDFYHLYKEENVTIQVGGNDQWGNITAGIDLINRIQPIKNKGLPFGITVP 294

Query: 228 LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM 287
           LLTTA+G K GK+   A++++  + + Y+ +Q++ N  DADV  F K  T L  SEI ++
Sbjct: 295 LLTTATGEKFGKSAGNAVFIDPSINTAYDVYQFFYNTLDADVPKFLKIFTFLNSSEIKKI 354

Query: 288 AKLQGKEI--NEAKKIIATEITTMVHGREEAEKAATAAMECFDM-SIHSQHMPTISISKD 344
            +   K       + ++A E+T M++G      +   +   F            + + K 
Sbjct: 355 VETHIKSPSLRYGQTLLAKEVTDMLYGVGSGSDSEALSNIIFGRYDGTLSAAKLVDLCKK 414

Query: 345 E-----VSRGMGLLTLIVKAGFAT-STNEARRHLKSNAIKINNSIIS-NEKLQIKLQDFD 397
                   R + L+ LI        S +EARR L   ++ +++S    NE +        
Sbjct: 415 ARILQYADREIDLIKLI--CKLVNCSVSEARRKLSQGSVYLHHSKSKVNENISNLAPFLI 472

Query: 398 STGNIKLSFGKKNHIICHLC 417
               + L  GK+   I  + 
Sbjct: 473 DDRVLILRIGKQKCFIIEMT 492


>gi|320451146|ref|YP_004203242.1| tyrosyl-tRNA synthetase [Thermus scotoductus SA-01]
 gi|320151315|gb|ADW22693.1| tyrosyl-tRNA synthetase [Thermus scotoductus SA-01]
          Length = 434

 Score =  353 bits (907), Expect = 3e-95,   Method: Composition-based stats.
 Identities = 103/436 (23%), Positives = 176/436 (40%), Gaps = 48/436 (11%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG    I     L  L     +   +G D T   LH GH   L  +   Q+ GHK +
Sbjct: 16  LLKRGAEEIIPEEELLLKLKEGRPLVVKLGADPTRPDLHLGHAVVLRKMRQFQELGHKVV 75

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            ++G  T +IGDPS R ++R  +  +E +EN           ++         +  N  W
Sbjct: 76  LIIGDFTGMIGDPSGRSKTRPPLTLEETRENARTYVEQAGKILRQ--EPHLFELRYNSEW 133

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L  + + +++R + S  +V +ML  E  + R +    +S  EF Y   QAYD V +  + 
Sbjct: 134 LEGLTFKEVVR-LTSLMTVAQMLEREDFKKRYEEGIPISLHEFLYPFAQAYDSVAIRAD- 191

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKE 250
              ++MGG+DQ  N++ G ++      P   A   PLL    G  KM K+L   I + + 
Sbjct: 192 ---IEMGGTDQKFNLLVGREVQRAYGQPPQVAFLMPLLVGLDGREKMSKSLDNYIGVAEP 248

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMV 310
              P   ++    + DA + S+ + LT L  +EI     L       A +++A  +T   
Sbjct: 249 ---PEVMFKKLMWVPDALLESYFRLLTDLEEAEI---QTLLKAGPVPAHRVLARLLTAAY 302

Query: 311 -------------------------HGREEAEKAATAAMECFD---MSIHSQHMPTISIS 342
                                      +E   +A   A   +D        +++P + I 
Sbjct: 303 ALPTIPARIDRAFYESLGYSFEALGKDKEAGPEAVRQAEARYDQVAKGAIPENIPEVVIP 362

Query: 343 KDEVSRG-MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
             E+  G + +  L   AG   S  EARR +++  ++++  +I +  L++ L        
Sbjct: 363 ASELKEGRIWVARLFTLAGLTPSNAEARRLIQNRGLRLDGELIEDAGLEVDLS-----RP 417

Query: 402 IKLSFGKKNHIICHLC 417
             L  GK   +   L 
Sbjct: 418 RILQRGKDRFVRVRLA 433


>gi|323346192|gb|EGA80482.1| Msy1p [Saccharomyces cerevisiae Lalvin QA23]
          Length = 492

 Score =  353 bits (907), Expect = 3e-95,   Method: Composition-based stats.
 Identities = 131/439 (29%), Positives = 197/439 (44%), Gaps = 31/439 (7%)

Query: 7   DFLSILSERGFIHQISNPRE-LDILCS-QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           + L  L +RG + Q+S P   L    +    +  Y G D TA SLH G+L  LM+L    
Sbjct: 55  NILDELKQRGLVSQVSQPESFLRTKLNGNDKIKLYCGVDPTAQSLHLGNLVPLMVLLHFY 114

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT------ 118
             GH  ++++GG T  +GDPS R   R +M +     N+  I      F K G       
Sbjct: 115 VKGHDIVTVIGGATGKVGDPSGRKTERDVMENDIRHSNVASISQQLQRFFKNGLEYYRNR 174

Query: 119 -------GKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSF 171
                          NN  W   IK +D L + G    V  ML+ +S+ SRL+ +  L F
Sbjct: 175 CALTEDVPSGKYTPRNNFNWWKDIKMLDFLADFGRHIRVQSMLARDSISSRLQTKNGLGF 234

Query: 172 LEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL----GERLKTPKLFALTSP 227
            EF Y +LQAYDF  L K  +  +Q+GG+DQWGNI  GIDL             F +T P
Sbjct: 235 NEFTYQVLQAYDFYHLYKEENVTIQVGGNDQWGNITAGIDLINRIQPIKNKGLPFGITVP 294

Query: 228 LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM 287
           LLTTA+G K GK+   A++++  + + Y+ +Q++ N  DADV  F K  T L  SEI ++
Sbjct: 295 LLTTATGEKFGKSAGNAVFIDPSINTAYDVYQFFYNTLDADVPKFLKIFTFLNSSEIKKI 354

Query: 288 AKLQGKEI--NEAKKIIATEITTMVHGREEAEKAATAAMECFDM-SIHSQHMPTISISKD 344
            +   K       + ++A E+T M++G      +   +   F            + + K 
Sbjct: 355 VETHIKSPSLRYGQTLLAKEVTDMLYGVGSGSDSEALSNIIFGRYDGTLSAAKLVDLCKK 414

Query: 345 E-----VSRGMGLLTLIVKAGFAT-STNEARRHLKSNAIKINNSIIS-NEKLQIKLQDFD 397
                   R + L+ LI        S +EARR L   ++ +++S    NE +        
Sbjct: 415 ARILQYADREIDLIKLI--CKLVNCSVSEARRKLSQGSVYLHHSKSKVNENISNLAPFLI 472

Query: 398 STGNIKLSFGKKNHIICHL 416
               + L  GK+   I  +
Sbjct: 473 DDRVLILRIGKQKCFIIEM 491


>gi|256274193|gb|EEU09101.1| Msy1p [Saccharomyces cerevisiae JAY291]
          Length = 492

 Score =  353 bits (907), Expect = 3e-95,   Method: Composition-based stats.
 Identities = 132/439 (30%), Positives = 198/439 (45%), Gaps = 31/439 (7%)

Query: 7   DFLSILSERGFIHQISNPRE-LDILCS-QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           + L  L +RG + Q+S P   L    +    +  Y G D TA SLH G+L  LM+L    
Sbjct: 55  NILDELKQRGLVSQVSQPESFLRTKLNGNDKIKLYCGVDPTAQSLHLGNLVPLMVLLHFY 114

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT------ 118
             GH  ++++GG T  +GDPS R   R +M +   Q N+  I      F K G       
Sbjct: 115 VKGHDIVTVIGGATGKVGDPSGRKTERDVMENDIRQNNVTSISQQLQRFFKNGLEYYRNR 174

Query: 119 -------GKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSF 171
                          NN  W   IK +D L + G    V  ML+ +S+ SRL+ +  L F
Sbjct: 175 CALTEDVPSGKYTPRNNFNWWKDIKMLDFLADFGRHIRVQSMLARDSISSRLQTKNGLGF 234

Query: 172 LEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL----GERLKTPKLFALTSP 227
            EF Y +LQAYDF  L K  +  +Q+GG+DQWGNI  GIDL             F +T P
Sbjct: 235 NEFTYQVLQAYDFYHLYKEENVTIQVGGNDQWGNITAGIDLINRIQPIKNKGLPFGITVP 294

Query: 228 LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM 287
           LLTTA+G K GK+   A++++  + + Y+ +Q++ N  DADV  F K  T L  SEI ++
Sbjct: 295 LLTTATGEKFGKSAGNAVFIDPSINTAYDVYQFFYNTLDADVPKFLKIFTFLNSSEIKKI 354

Query: 288 AKLQGKEI--NEAKKIIATEITTMVHGREEAEKAATAAMECFDM-SIHSQHMPTISISKD 344
            +   K       + ++A E+T M++G      +   +   F            + + K 
Sbjct: 355 VETHIKSPSLRYGQTLLAKEVTDMLYGVGSGSDSEALSNIIFGRYDGTLSAAKLVDLCKK 414

Query: 345 E-----VSRGMGLLTLIVKAGFAT-STNEARRHLKSNAIKINNSIIS-NEKLQIKLQDFD 397
                   R + L+ LI        S +EARR L   ++ +++S    NE +        
Sbjct: 415 ARILQYADREIDLIKLI--CKLVNCSVSEARRKLSQGSVYLHHSKSKVNENISNLAPFLI 472

Query: 398 STGNIKLSFGKKNHIICHL 416
               + L  GK+   I  +
Sbjct: 473 DDRVLILRIGKQKCFIIEM 491


>gi|323335043|gb|EGA76333.1| Msy1p [Saccharomyces cerevisiae Vin13]
 gi|323352016|gb|EGA84555.1| Msy1p [Saccharomyces cerevisiae VL3]
          Length = 492

 Score =  353 bits (907), Expect = 3e-95,   Method: Composition-based stats.
 Identities = 131/439 (29%), Positives = 197/439 (44%), Gaps = 31/439 (7%)

Query: 7   DFLSILSERGFIHQISNPRE-LDILCS-QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           + L  L +RG + Q+S P   L    +    +  Y G D TA SLH G+L  LM+L    
Sbjct: 55  NILDELKQRGLVSQVSQPESFLRTKLNGNDKIKLYCGVDPTAQSLHLGNLVPLMVLLHFY 114

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT------ 118
             GH  ++++GG T  +GDPS R   R +M +     N+  I      F K G       
Sbjct: 115 VKGHDIVTVIGGATGKVGDPSGRKTERDVMENDIRXSNVASISQQLQRFFKNGLEYYRNR 174

Query: 119 -------GKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSF 171
                          NN  W   IK +D L + G    V  ML+ +S+ SRL+ +  L F
Sbjct: 175 CALTEDVPSGKYTPRNNFNWWKDIKMLDFLADFGRHIRVQSMLARDSISSRLQTKNGLGF 234

Query: 172 LEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL----GERLKTPKLFALTSP 227
            EF Y +LQAYDF  L K  +  +Q+GG+DQWGNI  GIDL             F +T P
Sbjct: 235 NEFTYQVLQAYDFYHLYKEENVTIQVGGNDQWGNITAGIDLINRIQPIKNKGLPFGITVP 294

Query: 228 LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM 287
           LLTTA+G K GK+   A++++  + + Y+ +Q++ N  DADV  F K  T L  SEI ++
Sbjct: 295 LLTTATGEKFGKSAGNAVFIDPSINTAYDVYQFFYNTLDADVPKFLKIFTFLNSSEIKKI 354

Query: 288 AKLQGKEI--NEAKKIIATEITTMVHGREEAEKAATAAMECFDM-SIHSQHMPTISISKD 344
            +   K       + ++A E+T M++G      +   +   F            + + K 
Sbjct: 355 VETHIKSPSLRYGQTLLAKEVTDMLYGVGSGSDSEALSNIIFGRYDGTLSAAKLVDLCKK 414

Query: 345 E-----VSRGMGLLTLIVKAGFAT-STNEARRHLKSNAIKINNSIIS-NEKLQIKLQDFD 397
                   R + L+ LI        S +EARR L   ++ +++S    NE +        
Sbjct: 415 ARILQYADREIDLIKLI--CKLVNCSVSEARRKLSQGSVYLHHSKSKVNENISNLAPFLI 472

Query: 398 STGNIKLSFGKKNHIICHL 416
               + L  GK+   I  +
Sbjct: 473 DDRVLILRIGKQKCFIIEM 491


>gi|119356645|ref|YP_911289.1| tyrosyl-tRNA synthetase [Chlorobium phaeobacteroides DSM 266]
 gi|119353994|gb|ABL64865.1| tyrosyl-tRNA synthetase [Chlorobium phaeobacteroides DSM 266]
          Length = 405

 Score =  353 bits (907), Expect = 3e-95,   Method: Composition-based stats.
 Identities = 98/401 (24%), Positives = 178/401 (44%), Gaps = 26/401 (6%)

Query: 20  QISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLM 74
           +I +  EL+   ++       +   +G D +   LH GH   L  L   Q  GH+ I ++
Sbjct: 19  EIISINELEQKLAESIKTDKPLKIKLGADPSRPDLHLGHSVVLGKLRQFQDLGHEAILII 78

Query: 75  GGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCS 134
           G  T++IGDPS + ++R  + ++E ++N        S  +          +  N  WL +
Sbjct: 79  GDFTAMIGDPSGKSKTRPQLSAEEARQNGVSYFEQASKILD----PEKTTICYNADWLGA 134

Query: 135 IKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCR 194
           +K+ D++R + S ++V RML  +    R +  + +S  EF Y + Q  D V L  +    
Sbjct: 135 MKFADVIR-LSSHYTVARMLERDDFERRYRSNEPISIHEFLYPLAQGMDSVHLEND---- 189

Query: 195 LQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTS 253
           +++GG+DQ  N++ G DL           +T PLL   +G  KM K+L  A+  N     
Sbjct: 190 VELGGTDQKFNLLVGRDLQREYGIKPQVCITMPLLVGTAGEEKMSKSLGNAVCFN---DL 246

Query: 254 PYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGR 313
           P + +    +I DA +  + K L     +  + +         +AK+ +A EI    +  
Sbjct: 247 PSDMYGKLLSIPDALIAPYCKLLLPGGNANGNVILDRIVDSPRDAKRTLAREIVAQYYSA 306

Query: 314 EEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLK 373
           E+A+ A T   + F       ++          S+ + L+ L+V  G  TS +EARR ++
Sbjct: 307 EQADDAETHFDQVFVHKKTPDNIELFEFE----SQSLPLVDLLVILGAYTSKSEARRMIQ 362

Query: 374 SNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
             A+ +N+  + +    + L+D        +  GK+     
Sbjct: 363 QKAVLVNDVKVEDTNTLVALED----KPTIIKAGKRKFFKV 399


>gi|89896576|ref|YP_520063.1| tyrosyl-tRNA synthetase [Desulfitobacterium hafniense Y51]
 gi|89336024|dbj|BAE85619.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 410

 Score =  353 bits (906), Expect = 3e-95,   Method: Composition-based stats.
 Identities = 97/400 (24%), Positives = 172/400 (43%), Gaps = 29/400 (7%)

Query: 23  NPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGG 77
           N  EL    ++       +   +G D +A  +H GH   L  +  +Q  GH+ + ++G  
Sbjct: 20  NAEELKNKLAESHKNRRPLVIKLGLDPSAPDIHLGHAVVLRKIKQMQDLGHEAVIVIGDF 79

Query: 78  TSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKY 137
           T  IGDPS + + R  +  ++++EN           +     K    +  N  WL  + +
Sbjct: 80  TGKIGDPSGKAKGRTALSDEQVKENARTYFEQIFKVLD----KEKTTVRYNSEWLSKLNF 135

Query: 138 IDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQM 197
            D+L+ + +  +V RML  +  + R      +   EF Y ++QAYD V L  +    +++
Sbjct: 136 EDVLK-LAATTTVARMLERDDFQKRFGSNIPIGIHEFFYPLMQAYDSVTLKAD----IEL 190

Query: 198 GGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYN 256
           GG+DQ  NI+ G  L + +  P+  A+  PLL    G  KM K+L   I + +       
Sbjct: 191 GGTDQTFNILMGRTLQKAMGQPQQIAMFMPLLEGLDGVEKMSKSLGNYIGVYEPAPV--- 247

Query: 257 FWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEITTMVHGRE 314
            ++    + D  ++ + +  T      I+  R+   QGK   + K  +A  IT + H  +
Sbjct: 248 MFKKVMEVSDPLILKYFELATDEHPDRIEAFRLELAQGKNPRDVKYALAEIITRLYHTEQ 307

Query: 315 EAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKS 374
           +   A       F        +P + +     SR M L+ L+V++GF  S  E RR ++ 
Sbjct: 308 DVMTAKAYYEAAFSKKTIPAQIPVLPVKAR--SRLMELVPLLVQSGFTASNGEFRRLVQQ 365

Query: 375 NAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
             +++N   IS+    +   D        L  GKK  +  
Sbjct: 366 GGVQLNQQKISDLDRVLADGD-------VLKIGKKCFVKV 398


>gi|46199335|ref|YP_005002.1| tyrosyl-tRNA synthetase [Thermus thermophilus HB27]
 gi|55981368|ref|YP_144665.1| tyrosyl-tRNA synthetase [Thermus thermophilus HB8]
 gi|25091347|sp|P83453|SYY_THET2 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|81363981|sp|Q5SIH0|SYY_THET8 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|24158659|pdb|1H3F|A Chain A, Tyrosyl-Trna Synthetase From Thermus Thermophilus
           Complexed With Tyrosinol
 gi|24158660|pdb|1H3F|B Chain B, Tyrosyl-Trna Synthetase From Thermus Thermophilus
           Complexed With Tyrosinol
 gi|24987338|pdb|1H3E|A Chain A, Tyrosyl-Trna Synthetase From Thermus Thermophilus
           Complexed With Wild-Type Trnatyr(Gua) And With Atp And
           Tyrosinol
 gi|46196960|gb|AAS81375.1| tyrosyl-tRNA synthetase [Thermus thermophilus HB27]
 gi|55772781|dbj|BAD71222.1| tyrosyl-tRNA synthetase (tyrosine--tRNA ligase) (TyrRS) [Thermus
           thermophilus HB8]
          Length = 432

 Score =  353 bits (906), Expect = 3e-95,   Method: Composition-based stats.
 Identities = 99/437 (22%), Positives = 173/437 (39%), Gaps = 50/437 (11%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG    +     L  L     +T  +G D T   LH GH   L  +   Q+ GHK +
Sbjct: 14  LLKRGAEEIVPEEELLAKLKEGRPLTVKLGADPTRPDLHLGHAVVLRKMRQFQELGHKVV 73

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            ++G  T +IGDPS R ++R  +  +E +EN +         ++         +  N  W
Sbjct: 74  LIIGDFTGMIGDPSGRSKTRPPLTLEETRENAKTYVAQAGKILRQ--EPHLFELRYNSEW 131

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L  + + +++R + S  +V +ML  E  + R +    +S  E  Y   QAYD V +  + 
Sbjct: 132 LEGLTFKEVVR-LTSLMTVAQMLEREDFKKRYEAGIPISLHELLYPFAQAYDSVAIRAD- 189

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKE 250
              ++MGG+DQ  N++ G ++              PLL    G  KM K+L   I L + 
Sbjct: 190 ---VEMGGTDQRFNLLVGREVQRAYGQSPQVCFLMPLLVGLDGREKMSKSLDNYIGLTEP 246

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMV 310
              P   ++    + D  + S+ + LT L     + +  L       A +++A  +T   
Sbjct: 247 ---PEAMFKKLMRVPDPLLPSYFRLLTDLEE---EEIEALLKAGPVPAHRVLARLLTAAY 300

Query: 311 -----------------------------HGREEAEKAATAAMECFDMSIHSQHMPTISI 341
                                         G EE  +A     E        + +P ++I
Sbjct: 301 ALPQIPPRIDRAFYESLGYAWEAFGRDKEAGPEEVRRAEARYDEV-AKGGIPEEIPEVTI 359

Query: 342 SKDEVSRG-MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG 400
              E+  G + +  L   AG   S  EARR +++  ++++  ++++  LQ+ L       
Sbjct: 360 PASELKEGRIWVARLFTLAGLTPSNAEARRLIQNRGLRLDGEVLTDPMLQVDLS-----R 414

Query: 401 NIKLSFGKKNHIICHLC 417
              L  GK   +   L 
Sbjct: 415 PRILQRGKDRFVRVRLS 431


>gi|258592585|emb|CBE68894.1| Tyrosyl-tRNA synthetase (Tyrosine--tRNA ligase) (TyrRS) [NC10
           bacterium 'Dutch sediment']
          Length = 415

 Score =  352 bits (905), Expect = 4e-95,   Method: Composition-based stats.
 Identities = 101/425 (23%), Positives = 181/425 (42%), Gaps = 29/425 (6%)

Query: 1   MPAFKSDFLSILSE--RGFIHQISNPRELDIL---CSQG-VVTAYIGYDLTASSLHAGHL 54
           M   K+     L    RG +  +S+   L+ L      G  +   +G D +A  LH GH 
Sbjct: 1   MNDLKAQAYEQLCAIRRGAVEIMSDAELLEKLERSLRTGIPLRIKLGADPSAPDLHLGHT 60

Query: 55  TQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFI 114
             L  L   Q  GH+ I L+G  T +IGDP+ R E+R+ +  +E+Q N +  K      +
Sbjct: 61  VVLRKLRQFQDFGHQVIFLIGDFTGMIGDPTGRSETRKPLSVEEVQANADTYKRQIFRIL 120

Query: 115 KYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEF 174
                +    +  N  WL  + +  ++R      +V R+L  +  + R +  + +   EF
Sbjct: 121 DEDRTE----IRFNSEWLSRMDFAGVIRLAAQH-TVARLLERDDFQKRYREGRPIGVHEF 175

Query: 175 NYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG 234
            Y + Q YD V L  +    +++GG+DQ  N++ G +L          AL +PL+    G
Sbjct: 176 LYPLAQGYDSVVLRAD----VELGGTDQKFNLLVGRELQRAYGQEPQVALITPLIEGTDG 231

Query: 235 -TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT---TLPMSEIDRMAKL 290
             KM K+L   I +++        +    +I D  +V +A+ +       +  +D   KL
Sbjct: 232 VQKMSKSLGNYIGIDEPAR---EVYGKAMSIPDELIVKYAELVAGVLPEAVEAMDEGLKL 288

Query: 291 QGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGM 350
                  AK  +A E+  +  G + AE+AA      F        +   ++  +  +  +
Sbjct: 289 GTLHPRTAKAKVAWELVALYRGEQAAEEAALEFDRMFRDKRLPDEISLFAVEDERAA--V 346

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            L+ LI ++G   S +EARR ++   + ++  ++ NE  ++ L          L  GK+ 
Sbjct: 347 DLVWLIKESGGTKSLSEARRLIRQGGVSLDGQVVRNECARVSLDC-----EHLLKVGKRF 401

Query: 411 HIICH 415
                
Sbjct: 402 FRRVK 406


>gi|293363882|ref|ZP_06610618.1| tyrosine--tRNA ligase [Mycoplasma alligatoris A21JP2]
 gi|292552372|gb|EFF41146.1| tyrosine--tRNA ligase [Mycoplasma alligatoris A21JP2]
          Length = 410

 Score =  352 bits (905), Expect = 4e-95,   Method: Composition-based stats.
 Identities = 133/423 (31%), Positives = 222/423 (52%), Gaps = 26/423 (6%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + L  L +RG + Q+SN ++L+ L  +     Y G+D TA SLH G+   ++ L   +K 
Sbjct: 2   NILDDLKQRGILKQVSNEQKLNSL--EKNSGVYSGFDPTAKSLHLGNYIVIINLLRFKKF 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           G KP++++GG T +IGDPSF+D  R ++  + I EN  KIK     F           ++
Sbjct: 60  GFKPVAILGGTTGMIGDPSFKDSERVLLDEKTIFENKLKIKEQLEKF--------GLEVI 111

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           +N  +   +  ID LR IG   +V+ ML+ +SV SR+  E+ LSF EF+Y ++Q YDF +
Sbjct: 112 DNYDFYKDMNVIDFLRNIGKLINVSYMLAKDSVASRI--EKGLSFTEFSYQLIQGYDFYK 169

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGER--LKTPKLFALTSPLLTTASGTKMGKT-LSG 243
           L K+ +  +Q GGSDQWGN+  G+++  +    + K  A+T  LLT + G K GK+   G
Sbjct: 170 LYKDNNVFVQCGGSDQWGNLTAGLEIISKNIGDSNKAVAITFNLLTDSEGNKFGKSTGGG 229

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKI 301
           ++WL+KEM SPYN +Q+  N  D++V     +LT L +  I +     L+  +   A++I
Sbjct: 230 SLWLDKEMNSPYNLYQFLYNQPDSEVEKLLNQLTLLEIDYIKKVINEHLKNTQKRYAQEI 289

Query: 302 IATEITTMVHGREEAEKAATAAMECFDM-------SIHSQHMPTISISKDEVSRGMGLLT 354
           +A ++ + +H + +AE A   +   F+        SI+  +M    +    V++   L+ 
Sbjct: 290 LAYQVVSDIHSKNDAEHAKLTSQIMFNKTFDFTKISINQLNMVKNQLKIVVVNKNTNLID 349

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            ++      S  EAR  + + ++K N + I +E+  I            L  GKK   + 
Sbjct: 350 ELISKKIINSKREAREFISTKSLKWNMTPI-DEEF-ITKSTLFDGKYAILHKGKKQIYLV 407

Query: 415 HLC 417
            + 
Sbjct: 408 EIA 410


>gi|121593058|ref|YP_984954.1| tyrosyl-tRNA synthetase [Acidovorax sp. JS42]
 gi|120605138|gb|ABM40878.1| tyrosyl-tRNA synthetase [Acidovorax sp. JS42]
          Length = 410

 Score =  352 bits (905), Expect = 5e-95,   Method: Composition-based stats.
 Identities = 94/410 (22%), Positives = 176/410 (42%), Gaps = 30/410 (7%)

Query: 15  RGFIHQISNPRELDILCSQG----VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           RG    +        L         +   +G D TA  +H GH   L  +  LQ  GH+ 
Sbjct: 24  RGVDELLPQEEWTQKLARSEATGQPLRIKLGLDPTAPDIHLGHTVVLNKMRQLQDLGHQV 83

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           I L+G  T++IGDPS R+ +R  + +++I+ N +      +  +     +    +  N  
Sbjct: 84  IFLIGDFTTLIGDPSGRNSTRPPLTAEQIKVNAKTYYTQAAKVLDPARTE----IRYNSE 139

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           W   +    ++ ++ + ++V RM+       R     S+S  EF Y +LQ YD V L  +
Sbjct: 140 WCDQLGARGMI-QLSAKYTVARMMERNDFHQRFTDGSSISLHEFLYPLLQGYDSVALRSD 198

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNK 249
               L++GG+DQ  N++ G  L +         LT PLL    G  KM K+ +  I + +
Sbjct: 199 ----LELGGTDQKFNLLMGRHLQQEWGQEPQCVLTMPLLVGLDGVDKMSKSKNNYIGITE 254

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEIT 307
           +     + +    +I D  +  +   L+   + EI   +     G+   +AK ++A EIT
Sbjct: 255 DAN---SMFAKVLSISDTLMWDWYTLLSFKSLDEIAALKAEVAAGRNPKDAKVMLAKEIT 311

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
              H    A+ A    +           +P + ++       +G+  L+ +A  A ST+E
Sbjct: 312 ARFHSAALADAAEQDFINR-SKGGIPDDIPEVRLA----GAPLGIGALLKQANLAPSTSE 366

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           A R +    ++++  ++S++ L+++       G+  +  GK+      L 
Sbjct: 367 ANRLIDGGGVRVDGGVVSDKGLKLEA------GSYVVQVGKRKFARVTLA 410


>gi|325109325|ref|YP_004270393.1| tyrosyl-tRNA synthetase [Planctomyces brasiliensis DSM 5305]
 gi|324969593|gb|ADY60371.1| tyrosyl-tRNA synthetase [Planctomyces brasiliensis DSM 5305]
          Length = 408

 Score =  352 bits (904), Expect = 5e-95,   Method: Composition-based stats.
 Identities = 92/417 (22%), Positives = 182/417 (43%), Gaps = 30/417 (7%)

Query: 11  ILSERGFIHQISNPRELDILCSQG-----VVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
            L +RG + +I    EL     +       +    G D T   +H GH   L  +   Q+
Sbjct: 13  ELIQRG-VEKIVPENELRQKLEKSRETGTPLRIKYGIDPTGIDMHLGHTVPLRKMRQFQE 71

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+ + ++G  T+++GDPS RD++R  + +++++ N +      +  I        A +
Sbjct: 72  MGHQAVIIIGNYTAMVGDPSGRDDTRARLTAEQVEANAQDYLRQVAKVIDLD----AAEI 127

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
             N  W   + +  +L E+ S  +V ++L+ E    R K EQ++   E  Y ++Q +D V
Sbjct: 128 HRNGDWFSKMDFARML-ELCSKVTVAQLLNREDFSKRFKAEQAIFLHECLYPLMQGWDSV 186

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGA 244
           E+  +    +++GG++Q    +   DL    +  +   + SP+L    G  +MGK+L   
Sbjct: 187 EIRAD----IELGGTEQLYTFMLARDLQRDQEMSQQIGIMSPILVGTDGVRRMGKSLGNY 242

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           I +     +PY+  + +  + D  +  + + LT LP+ +++    +      +AK+ +A 
Sbjct: 243 IGI---ADAPYDMAKKFMQLPDDVMRPYFELLTDLPLDQVEE---ILAGHPKQAKQALAK 296

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFAT 363
            +    H  EE E A     +          +P +++   ++  G M  + L+   G   
Sbjct: 297 LVIGEYHSSEEGEAAIARWEQEISGGGLPADIPEVNLEPAQLEDGQMKAVDLLHALGLVA 356

Query: 364 STNEARRHLKSNAIKINNSI--ISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLCG 418
           S  E+RR ++    K+      ++     I ++D      + +  GKK      L G
Sbjct: 357 SKGESRRLIQQGGAKLGEEKTPMTAIDQLIPIED-----GLLVWAGKKRFCRVRLNG 408


>gi|146296490|ref|YP_001180261.1| tyrosyl-tRNA synthetase [Caldicellulosiruptor saccharolyticus DSM
           8903]
 gi|145410066|gb|ABP67070.1| tyrosyl-tRNA synthetase [Caldicellulosiruptor saccharolyticus DSM
           8903]
          Length = 396

 Score =  352 bits (904), Expect = 6e-95,   Method: Composition-based stats.
 Identities = 103/393 (26%), Positives = 181/393 (46%), Gaps = 28/393 (7%)

Query: 29  ILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRD 88
            L     +   +G D     +H GH   L  L  LQ  GH  I ++G  T++IGDP+ + 
Sbjct: 26  KLKQDRPLNIKLGLDPNVPDVHLGHAVVLRKLKQLQDLGHNIILIIGDFTAMIGDPTGKS 85

Query: 89  ESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFF 148
           E+R+ +  +E+Q+N E  K      +          +  N  WL  + ++D++  + S +
Sbjct: 86  ETRKQLTKEEVQKNAEPFKEQVLKILD----PQKTTIRYNSEWLEPMNFLDVI-NLASKY 140

Query: 149 SVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIIC 208
           +V RML  E+ R R+++   LS  EF Y ++Q YD V +    +  +++G ++Q  NI+ 
Sbjct: 141 TVARMLERETFRQRMEKNLPLSIHEFFYPLMQGYDSVVI----EADVELGATEQKFNILM 196

Query: 209 GIDLGERLKTPK-LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDD 266
           G  L +   +     AL  P+L    G  KM K+L   I +N+    P   +    +I D
Sbjct: 197 GRTLQKEYGSKTIQVALLMPILVGTDGVNKMSKSLGNYIGINE---PPNIMYGKVMSIPD 253

Query: 267 ADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAKKIIATEITTMVHGREEAEKAATAA 323
             ++S+ +  T L   EI+ M +   +      +AK  +A EI  + HG E A+KA    
Sbjct: 254 EIMISYYELTTDLEPEEIEEMKRKLEEGTLHPRDAKMRLAREIVKLYHGEEAAKKAEEEF 313

Query: 324 MECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSI 383
           +  F        +P + ++  +V     L   +V+    +ST+E  R +KS A+K+N   
Sbjct: 314 IRVFQKKDVPDDIPEVELANAKV----YLPRFMVENKLCSSTSEGMRLIKSGAVKLNGEK 369

Query: 384 ISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           ++   ++++  D        L  GK   +   L
Sbjct: 370 VNELDIELQNGD-------VLQVGKLKFVKVKL 395


>gi|297181132|gb|ADI17329.1| tyrosyl-tRNA synthetase [uncultured Oceanospirillales bacterium
           HF0070_21F08]
          Length = 397

 Score =  352 bits (904), Expect = 6e-95,   Method: Composition-based stats.
 Identities = 95/407 (23%), Positives = 176/407 (43%), Gaps = 24/407 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           L  RG   +I    EL    + G  +    G+D TA  LH GH   +  L   Q+ GH  
Sbjct: 10  LLRRGA-DEIIQEDELRERIASGRPLRVKAGFDPTAPDLHLGHTVLINKLRQFQELGHHV 68

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           + L+G  T +IGDP+ +  +R  +  +EI+ N E  K      +     +    ++ N T
Sbjct: 69  MFLIGDFTGMIGDPTGKSATRPPLTPEEIERNAETYKEQVFKILDPEKTE----VVFNST 124

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           W+  +    +++ + S ++V RML  +    R +  Q ++  EF Y ++Q YD V +   
Sbjct: 125 WMNQVGAAGMIK-LASQYTVARMLERDDFDKRYRANQPIAVHEFLYPLVQGYDSVAM--- 180

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNK 249
            +  +++GG+DQ  N++ G  L +         LT P+L    G  KM K+L   + +N 
Sbjct: 181 -EADVELGGTDQKFNLLMGRTLQKAYGQAPQICLTMPILEGLDGVQKMSKSLKNYVGVN- 238

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINEAKKIIATEIT 307
              +P   ++   +I D     + + L+ L    ++       +     EAKK  A E+ 
Sbjct: 239 --DAPGEMYRKLLSIPDDMTWRYYELLSGLSNEALEERKAEADRLGSPQEAKKAFALEMV 296

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
           T  HG   A+ A ++A     +     ++P + +  ++    + ++ L+  AG A +   
Sbjct: 297 TRFHGEAAAQAAPSSAGNLTSLGAIPDNVPEVEVVLEDGDE-VHVVPLLRLAGLAQNGKA 355

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           A+      A+ ++   ++ E+       F    +  +  GKK     
Sbjct: 356 AKYVFGRGAVYVDGQQLTEERT------FARGESAVIQAGKKKIARV 396


>gi|229815735|ref|ZP_04446060.1| hypothetical protein COLINT_02784 [Collinsella intestinalis DSM
           13280]
 gi|229808651|gb|EEP44428.1| hypothetical protein COLINT_02784 [Collinsella intestinalis DSM
           13280]
          Length = 404

 Score =  352 bits (904), Expect = 6e-95,   Method: Composition-based stats.
 Identities = 95/401 (23%), Positives = 171/401 (42%), Gaps = 20/401 (4%)

Query: 20  QISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGT 78
           +I    +L     +G  +   +G D T+  LH GH   L  +   Q  GH+   ++G GT
Sbjct: 17  KIVPEADLKKKLERGVPLNIKLGVDPTSPDLHLGHAVPLRKMRQFQDLGHRVTLIIGNGT 76

Query: 79  SIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYI 138
           + IGDPS ++ +R  +  +E++ N           +          +++N  W+  +   
Sbjct: 77  ATIGDPSGKNSTRPQLTQEEVEANAATYVSQAMKILD----PEKTTIVHNGDWMFPMDLK 132

Query: 139 DLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMG 198
           +LL  I S F+V R+L  +    R + +  ++  EF Y I+QAYD V++    +  ++MG
Sbjct: 133 ELL-SIASKFTVARILERDDFTKRYQSQTPIALHEFLYPIMQAYDSVKI----EADVEMG 187

Query: 199 GSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNF 257
           GSDQ  N++ G +L E++      ALT PLL    GT KM K+    I L     +P + 
Sbjct: 188 GSDQLFNLLAGRELMEKMGMEPQIALTMPLLEGTDGTRKMSKSYGNYIGLT---DAPADM 244

Query: 258 WQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG---KEINEAKKIIATEITTMVHGRE 314
           +    +I D  +  + +  ++L  +E+D +            E K+ +  ++ T  H  E
Sbjct: 245 FGKTMSIPDEMIGKYYRLASSLAPAEVDAIDAALADGSANPYELKRALGRDLVTTYHSAE 304

Query: 315 EAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGM-GLLTLIVKAGFATSTNEARRHLK 373
           +A  A                +  +S+       G+  L  ++  AG   S  +ARR + 
Sbjct: 305 DAVAAEAEFDRVHKNHDLPTDIAEVSVEISVNDEGLVYLPAVLQAAGLVPSAGQARRDID 364

Query: 374 SNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
              +K++   I+ +   +            L  GK+     
Sbjct: 365 GGGVKLDGEAIAPKTYNVDPATLKPG--TVLQVGKRKFARL 403


>gi|322380907|ref|ZP_08054985.1| tyrosyl-tRNA synthetase [Helicobacter suis HS5]
 gi|321146675|gb|EFX41497.1| tyrosyl-tRNA synthetase [Helicobacter suis HS5]
          Length = 401

 Score =  352 bits (904), Expect = 6e-95,   Method: Composition-based stats.
 Identities = 110/391 (28%), Positives = 189/391 (48%), Gaps = 29/391 (7%)

Query: 32  SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESR 91
           +    +A  G+D TA  LH GH+  L  L  LQ+ G +   ++G  T+ IGDPS + E+R
Sbjct: 35  TSNRFSAKAGFDPTAPDLHLGHMVLLNKLATLQRHGARVQFVIGDFTATIGDPSGKSETR 94

Query: 92  RMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVN 151
           +++  +E+ EN +  K      +          +  N  WL  +    LL  + S FSV 
Sbjct: 95  KILSFEEVLENAKTYKEQVFKILDPDLTD----VCFNSAWLKPLGAEGLL-VLTSKFSVA 149

Query: 152 RMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGID 211
           RML  +    R K  + +S +EF Y +LQ YD V L    +C +++GG+DQ  N++ G  
Sbjct: 150 RMLERDDFEKRYKENKPISVVEFMYPLLQGYDSVAL----ECDIELGGNDQKFNLLVGRF 205

Query: 212 LGERLK-TPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADV 269
           L      + +   LT PLL    G  KM K+L   I ++++   P N +    +I D  +
Sbjct: 206 LQRSYGLSKEQSVLTMPLLEGLDGVHKMSKSLGNYIGVSED---PKNMYAKLLSISDDLM 262

Query: 270 VSFAKRLTTLPMSEID--RMAKLQGK-EINEAKKIIATEITTMVHGREEAEKAATAAMEC 326
             + + L+     +I   +    +GK      K+ +A EITT +H  ++A++A       
Sbjct: 263 WRYYELLSAQTSQQIALLKQGVQEGKLHPKTIKEELALEITTRLHSLKQAQEAKAEFD-- 320

Query: 327 FDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISN 386
               I  + +P+  + + + S G+ + TL+  AG + ST++ARR +K+  ++IN  +I +
Sbjct: 321 ---RISHKQIPS-ELVQMQFSEGVWIGTLLKSAGLSPSTSQARRDIKAGGVRINQVVILD 376

Query: 387 EKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           E+ Q         G+  +  GK+  I   + 
Sbjct: 377 EQYQFSK------GSYVVQVGKRKFIRAIIA 401


>gi|313682974|ref|YP_004060712.1| tyrosyl-tRNA synthetase [Sulfuricurvum kujiense DSM 16994]
 gi|313155834|gb|ADR34512.1| tyrosyl-tRNA synthetase [Sulfuricurvum kujiense DSM 16994]
          Length = 400

 Score =  352 bits (903), Expect = 7e-95,   Method: Composition-based stats.
 Identities = 104/421 (24%), Positives = 180/421 (42%), Gaps = 35/421 (8%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLMLLF 61
           + L  +  RG   +I +   ++ L           T   G+D TA  LH GH   L  L 
Sbjct: 4   NALREIK-RGT-AEIIDEARIETLLKNYFEKGENYTVKAGFDPTAPDLHLGHTVLLQKLS 61

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKT 121
             QK G     L+G  T+ IGDP+ + E+R+ +   ++ EN +  K      +       
Sbjct: 62  VFQKFGAHIQFLIGDFTAQIGDPTGKSETRKKLLPAQVLENAQSYKDQVFKILD----PE 117

Query: 122 DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA 181
              ++ N  W+  +    +L E+ + ++V RML  +    R K   S+S  EF Y +LQ 
Sbjct: 118 KTTVVFNSEWINPLGAAGML-ELTTTYNVARMLERDDFDKRYKGGISISISEFLYPLLQG 176

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASG-TKMGK 239
           YD V L  +    +++GG+DQ  N++ G  L    +   +   L  P+L    G  KM K
Sbjct: 177 YDSVHLKSD----IEIGGTDQKFNLLMGRHLQRVYEIGKEQAVLMMPILEGLDGVQKMSK 232

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEIN 296
           +L   I + +   +P + +    +I D  +  + + L+   + EID +    +       
Sbjct: 233 SLGNYIGVVE---APNDMYGKVLSISDTLMWRYYELLSAKSLDEIDVLKTGVENGTLHPK 289

Query: 297 EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLI 356
           + K+ +A EIT   H  E AE A          S     M   S+        + +   +
Sbjct: 290 KVKEALAIEITARFHSAEAAEGAHAEFERVHAQSEIPSEMDEFSL-----EGPIWIAKAL 344

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V    + ST++ARR +K  ++KI+ + +S+E+ Q++       G   L  GK+      +
Sbjct: 345 VDCSLSPSTSQARREIKQGSVKIDQNKLSDEQYQLEA------GEYILQVGKRKFARLKV 398

Query: 417 C 417
            
Sbjct: 399 T 399


>gi|222109827|ref|YP_002552091.1| tyrosyl-tRNA synthetase [Acidovorax ebreus TPSY]
 gi|221729271|gb|ACM32091.1| tyrosyl-tRNA synthetase [Acidovorax ebreus TPSY]
          Length = 410

 Score =  352 bits (903), Expect = 8e-95,   Method: Composition-based stats.
 Identities = 95/410 (23%), Positives = 176/410 (42%), Gaps = 30/410 (7%)

Query: 15  RGFIHQISNPRELDILCSQG----VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           RG    +        L         +   +G D TA  +H GH   L  +  LQ  GH+ 
Sbjct: 24  RGVDELLPQEEWTQKLARSEATGQPLRIKLGLDPTAPDIHLGHTVVLNKMRQLQDLGHQV 83

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           I L+G  T++IGDPS R+ +R  + +++I+ N E      +  +     +    +  N  
Sbjct: 84  IFLIGDFTTLIGDPSGRNSTRPPLTAEQIKVNAETYYTQAAKVLDPARTE----IRYNSE 139

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           W   +    ++ ++ + ++V RM+       R     S+S  EF Y +LQ YD V L  +
Sbjct: 140 WCDQLGARGMI-QLSAKYTVARMMERNDFHQRFTDGSSISLHEFLYPLLQGYDSVALRSD 198

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNK 249
               L++GG+DQ  N++ G  L +         LT PLL    G  KM K+ +  I + +
Sbjct: 199 ----LELGGTDQKFNLLMGRHLQQEWGQEPQCVLTMPLLVGLDGVDKMSKSKNNYIGITE 254

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEIT 307
           +     + +    +I D  +  +   L+   + EI   +     G+   +AK ++A EIT
Sbjct: 255 DAN---SMFAKVLSISDTLMWDWYTLLSFKSLGEIAALKAEVAAGRNPKDAKVMLAKEIT 311

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
              H    A+ A    +           +P + ++       +G+  L+ +A  A ST+E
Sbjct: 312 ARFHSAALADAAEQDFVNR-SKGGIPDDIPEVRLA----GAPLGIGALLKQANLAPSTSE 366

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           A R +    ++++  ++S++ L+++       G+  +  GK+      L 
Sbjct: 367 ANRLIDGGGVRVDGVVVSDKGLKLEA------GSYVVQVGKRKFARVTLA 410


>gi|154250390|ref|YP_001411215.1| tyrosyl-tRNA synthetase [Fervidobacterium nodosum Rt17-B1]
 gi|154154326|gb|ABS61558.1| tyrosyl-tRNA synthetase [Fervidobacterium nodosum Rt17-B1]
          Length = 398

 Score =  352 bits (903), Expect = 8e-95,   Method: Composition-based stats.
 Identities = 96/385 (24%), Positives = 166/385 (43%), Gaps = 26/385 (6%)

Query: 34  GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRM 93
             +   +G D +   LH GH   L  L   Q  GH+ I ++G  T++IGDPS R+ +R M
Sbjct: 33  KPLRVKLGVDPSRPDLHLGHAVVLKKLKQFQDLGHQVILIIGDFTAMIGDPSGRNTTRPM 92

Query: 94  MRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRM 153
           +  +E+ EN +         +     K   ++  N  WL ++ + D+++  G + +V RM
Sbjct: 93  LSREEVVENAKSYAEQAFMILD----KEKTIIRYNNEWLGAMTFADVVKLAGKY-TVARM 147

Query: 154 LSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLG 213
           L  E    R      +S  EF Y + QAYD V +  +    +++GG+DQ  N++ G  + 
Sbjct: 148 LEREDFAKRYAEGTPISVAEFLYPLAQAYDSVAIQAD----VELGGTDQLFNLMVGRKIQ 203

Query: 214 ERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSF 272
           E         +T P++    G  KM K+ +  I    E   P + +    +I D  +V +
Sbjct: 204 EEYGLRPQIVMTMPIIEGTDGKLKMSKSYNNYIGFTDE---PRDMYGKVMSIPDELIVKY 260

Query: 273 AKRLTTLPMSEIDRMAK---LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDM 329
           AK LT +    + +M K    +     + K  +A EI    HG E+A+ A    +  F  
Sbjct: 261 AKLLTDVDDEVLRKMEKEINEKAVNPRDYKMWLAKEIVRQFHGEEKAKDAEEYFITVFQR 320

Query: 330 SIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKL 389
               + MP + I          ++ L+       S +E +R +    +  +N+ I N K 
Sbjct: 321 KEIPEEMPEVKIQAGVY----NIVDLLETLKI-GSRSEIKRLITQGGVYFDNNRIDNFKA 375

Query: 390 QIKLQDFDSTGNIKLSFGKKNHIIC 414
            +++          L  GK+  I  
Sbjct: 376 NVEIS-----KEHILRVGKRQFIKI 395


>gi|251771280|gb|EES51861.1| tyrosyl-tRNA synthetase [Leptospirillum ferrodiazotrophum]
          Length = 396

 Score =  351 bits (902), Expect = 9e-95,   Method: Composition-based stats.
 Identities = 104/420 (24%), Positives = 175/420 (41%), Gaps = 35/420 (8%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQG-----VVTAYIGYDLTASSLHAGHLT 55
           M    S  L  L  RG      +P +L     +       +    G+D TA  LH GH  
Sbjct: 1   MTDSVSSALDRLL-RGT-ADCVSPEDLRQKLERSARTGTPLRIKAGFDPTAPDLHIGHAV 58

Query: 56  QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK 115
            L+ L   Q  GH+ + L+G  T +IGDP+ R E R+ +  +EI++N           + 
Sbjct: 59  LLLKLREFQDLGHQVLFLIGDFTGMIGDPTGRSEIRKPLSPEEIRQNAATYAAQVDRILD 118

Query: 116 YGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFN 175
               +    ++ N  W+  +    ++R + +  +V   L  +  + R+++   +   E  
Sbjct: 119 RERTE----VVYNSRWMAELGTEGMIR-LAARQTVAHFLDRDDFKQRMEKNLPIHLHELL 173

Query: 176 YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG- 234
           Y ++Q YD V L  +    +++GG+DQ  N++ G DL           L+ PLL    G 
Sbjct: 174 YPLIQGYDSVALRAD----VELGGTDQLFNLLVGRDLQRSYGQEPQVVLSLPLLVGTDGE 229

Query: 235 TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE 294
            KM K+L  A+ L   +  P   +    +I D+   S+A  LT L  SEI          
Sbjct: 230 KKMSKSLKNAVGL---LDPPGEMFGKLMSIPDSATASYALLLTRLSESEIA------NLH 280

Query: 295 INEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLT 354
             EAK  +A  IT   HG E A  A       F        +    +   E    + L T
Sbjct: 281 PREAKATVAQAITARFHGEEAARSAREEFDRQFSRRELPSEIAGFVV---EGPSPVRLST 337

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           ++V++G A S + A++ ++  A+ ++ S +S+   +I            L  GK+ +   
Sbjct: 338 VMVRSGAARSESLAKQLIRQGAVDLDGSPVSDLFCEIVPA------GQLLRVGKRFYCRL 391


>gi|319785786|ref|YP_004145261.1| tyrosyl-tRNA synthetase [Pseudoxanthomonas suwonensis 11-1]
 gi|317464298|gb|ADV26030.1| tyrosyl-tRNA synthetase [Pseudoxanthomonas suwonensis 11-1]
          Length = 420

 Score =  351 bits (902), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 99/410 (24%), Positives = 163/410 (39%), Gaps = 23/410 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG    +        L +   +    G+D TA  LH GH   L  +   Q  GH+ I
Sbjct: 28  LIGRGADEILKRDELEARLKTGRPLRVKAGFDPTAPDLHLGHTVLLNKMRQFQDLGHQVI 87

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T +IGDP+ +  +R+ +  +++  N E         +     +    +  N  W
Sbjct: 88  FLIGDFTGMIGDPTGKSATRKPLTREDVLANAETYAEQVFKVLDRERTE----VRFNSEW 143

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
              +   D++R  G   +V RML  +    R   +QS++  EF Y ++Q YD V L  + 
Sbjct: 144 FGQMSAADMIRLAGQH-TVARMLERDDFSKRFAAQQSIAIHEFLYPLVQGYDSVALKAD- 201

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G  L E         LT PLL    G  KM K+L   I + + 
Sbjct: 202 ---VELGGTDQKFNLLMGRGLQEHYGQAPQIVLTMPLLEGLDGVNKMSKSLGNYIGIAEP 258

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTT-LPMSEID--RMAKLQGKEINEAKKIIATEIT 307
                +       I D  +  + + L+  +  +E    R     G    + K  +A E+ 
Sbjct: 259 A---IDIVNKTMKIGDELMWKWIELLSFEISTAEAKKLREEVAAGLNPRDIKLRLARELA 315

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
           T  H    A  A             +  +P   ++    + G+ L  L+  AG   S +E
Sbjct: 316 TRFHDAAAAGTAIAGWHAAVTGQGDTSLLPLQDVAVP--AEGLRLAALLTAAGITPSNSE 373

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           A R LK  A+K++  ++ +         F       L  GK+N     L 
Sbjct: 374 ANRKLKERAVKVDGEVVEDASQV-----FAPGFEGVLQVGKRNFARVRLV 418


>gi|283954835|ref|ZP_06372351.1| tyrosyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 414]
 gi|283793675|gb|EFC32428.1| tyrosyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 414]
          Length = 401

 Score =  351 bits (901), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 110/422 (26%), Positives = 188/422 (44%), Gaps = 36/422 (8%)

Query: 7   DFLSILSE--RGFIHQISNPRELDILC----SQGVVTA-YIGYDLTASSLHAGHLTQLML 59
           D   IL+E  RG   ++ +   ++ L      +G +     G+D TA  LH GH   L  
Sbjct: 2   DIKKILAEVKRGC-AELIDEERIENLIKNYYEKGKIFFIKAGFDPTAPDLHLGHSVILTK 60

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG 119
           + +LQK G     L+G  T  IGDPS +  +R+ +  +++  N +  +      +     
Sbjct: 61  MAFLQKHGAIVQFLIGDFTGQIGDPSGKSATRKKLNKEQVLINAKTYETQVFKVLD---- 116

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
           K    +  N TWL  +     + E+ S FSV RML  +    R K +  +S  EF Y +L
Sbjct: 117 KEKTQIKFNSTWLNELGATG-IVELTSTFSVARMLERDDFTKRFKEQSPISICEFLYPLL 175

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASGT-KM 237
           Q YD V L  +    ++MGG+DQ  N++ G  L        +   +  PLL    G  KM
Sbjct: 176 QGYDSVALKSD----IEMGGTDQKFNLLMGRQLQRVYNIGKEQAVIMMPLLEGLDGVNKM 231

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGK-E 294
            K+L+  I + ++     + +    +I D  +  + + L+   + EI ++ +   QG   
Sbjct: 232 SKSLNNYIGVTEKAN---DMYAKILSISDELMFRYYELLSQKSLEEIAQIKRDIEQGSLH 288

Query: 295 INEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLT 354
             +AK+ +A EIT   H +EEA+ A +        +     M    I        + L  
Sbjct: 289 PKKAKENLALEITERFHSKEEADNAKSEFDRIHSQNALPSDMAEFEI-----QGKIWLAK 343

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +V+ G  +ST+ ARR + +NAI +N+  +S+ ++ ++       G   L  GK+     
Sbjct: 344 ALVECGLESSTSAARRSISANAISVNSQKVSDGQMHLEQ------GEYILQIGKRKFAKL 397

Query: 415 HL 416
            +
Sbjct: 398 KV 399


>gi|119509109|ref|ZP_01628260.1| tyrosyl-tRNA synthetase [Nodularia spumigena CCY9414]
 gi|119466275|gb|EAW47161.1| tyrosyl-tRNA synthetase [Nodularia spumigena CCY9414]
          Length = 435

 Score =  351 bits (901), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 91/404 (22%), Positives = 168/404 (41%), Gaps = 33/404 (8%)

Query: 15  RGFIH---QISNPRELDILCSQG------VVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           RG +    Q ++    +    +        +   +G D T S +H GH   +  L   Q 
Sbjct: 42  RGIVEIFPQPTDVDGENESLEKRLVTTNRPLRIKLGIDPTGSDIHLGHSIPVRKLRAFQD 101

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH  + ++G  T+ IGDP+ + E RR +   ++ +N +         + + T      +
Sbjct: 102 AGHTAVLIIGDFTARIGDPTGKSEVRRQLTEADVAQNAQTYLDQVRPILDFDTP-GRLEV 160

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
             N  WL  +    +L E+ S  +V +ML+ E    R K+E  +   EF Y ++Q YD V
Sbjct: 161 RYNSEWLSGLDLGKIL-ELLSTMTVGQMLAKEGFAERYKKENPIFIHEFLYPLMQGYDSV 219

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGA 244
            +    +  +++GG+DQ  NI  G DL         F L  P+L    G  KM K+LS  
Sbjct: 220 AV----EADVELGGTDQKFNIAVGRDLQRHFGQKPQFGLLLPILIGTDGVQKMSKSLSNY 275

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           + L++    P   +Q  + + D  +  + + LT LP+ ++            + + ++A 
Sbjct: 276 VGLSE---HPAQKYQKLQGVPDNLLSQYFELLTDLPLEKLPE-------NPRDRQMLLAW 325

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
           E+    +G   A +A  AA            +P  S+S+      + L +L+   G   S
Sbjct: 326 EVVKQYNGEIAANEAKDAAKS----GGKEGTVPEFSLSEVS-EFPVKLASLLNVTGLCKS 380

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGK 408
           T E +R ++   ++++   +++     +           L   K
Sbjct: 381 TGEGKRKIQEGGVRLDGDRMTDIDTTFEQPSELHGR--VLQVVK 422


>gi|294657922|ref|XP_002770518.1| DEHA2E21318p [Debaryomyces hansenii CBS767]
 gi|199433054|emb|CAR65860.1| DEHA2E21318p [Debaryomyces hansenii]
          Length = 523

 Score =  351 bits (900), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 132/457 (28%), Positives = 204/457 (44%), Gaps = 47/457 (10%)

Query: 8   FLSILSERGFIHQISNPRELD--ILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
            +  L  R  +  I++          S+     Y G D TA SLH G+L  LM+L     
Sbjct: 67  LVGHLQSRYLVESITHDDLFKWTDPSSEKRFKLYCGADPTAESLHLGNLLPLMVLLHFNL 126

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG-------- 117
            GH  + L+GG T  +GDPS R   R  +  ++  +N+ +I+   S+F+K G        
Sbjct: 127 RGHDVVGLVGGATGAVGDPSGRTTERTQLAEEKRLDNVNRIQNQLSNFLKQGVEYAKSRN 186

Query: 118 ---TGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEF 174
                +      NN  W  SIK +D L   G    V+ ML  +S++SRLK E  L F EF
Sbjct: 187 FPIQKQGQIFTENNAKWWESIKILDFLSTYGKHIRVSAMLGRDSIQSRLKSEHGLGFNEF 246

Query: 175 NYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT-------------PKL 221
           +Y +LQAYDF  L KN    LQ+GG+DQWGNI  G+DL  RL+                 
Sbjct: 247 SYQVLQAYDFWHLFKNEKVNLQIGGNDQWGNITAGVDLISRLQKHFNRVSKPKDKIEEPS 306

Query: 222 FALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPM 281
           F +T PLLTT +G K GK+   AI++N+++T+PY  +QY+ N  D  V    K  T LPM
Sbjct: 307 FGMTVPLLTTPTGEKFGKSAGNAIFINEKLTTPYQLYQYFINTPDEIVAKLLKVFTILPM 366

Query: 282 SEIDRMAKLQGKEI--NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS--QHMP 337
           + I+++ +   ++     A++I+A E+T ++HG    +K A      F          + 
Sbjct: 367 ATIEKIVQKHNEDPGIRAAQRILAREVTDLIHGNGMGDKMAYVTSFLFPTPDQPFIDDIS 426

Query: 338 TISISKDEVSRGM---------GLLTLIVKAGFA----TSTNEARRHLKSNAIKIN---N 381
              +       G+          +  L +    A     S  E +  + +  I +    N
Sbjct: 427 ANKLISVFEKSGILVRFKFDDFNIDDLKLSTLLAKVMKKSKTETKNLIAAGGIYLGLDRN 486

Query: 382 SIISNEKLQI-KLQDFDSTGNIKLSFGKKNHIICHLC 417
             I  E + +           + +  GK+N+ +    
Sbjct: 487 QHIDPEDVVLFDKDHLIDGKLLLVRAGKQNYYVVEFS 523


>gi|260800994|ref|XP_002595381.1| hypothetical protein BRAFLDRAFT_119005 [Branchiostoma floridae]
 gi|229280627|gb|EEN51393.1| hypothetical protein BRAFLDRAFT_119005 [Branchiostoma floridae]
          Length = 541

 Score =  351 bits (900), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 113/329 (34%), Positives = 174/329 (52%), Gaps = 13/329 (3%)

Query: 3   AFKSDFLSILSERGFIHQISNPR--ELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           A K++ L  L ERG    I      EL  L   G    Y G+D TA SLH G+L  ++ L
Sbjct: 37  ATKTNIL-TLHERGIFVDIFPEASIELPKLLQSGPQCVYCGFDPTADSLHIGNLLAIIGL 95

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH  I+L+GG T+ IGDPS R + R  +   ++Q NI  I+       K     
Sbjct: 96  LHCQRAGHNTIALIGGATARIGDPSGRSKEREELDLDQLQTNIRGIESTLQRVCKNHQQD 155

Query: 121 TDA--------LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFL 172
                       + NN +W      ++ +  +G  F +  ML   SV++RLK  + +S  
Sbjct: 156 IWRSPKELPPLRIENNSSWYRQQSVVEFMSTVGRHFRMGTMLGRTSVQTRLKSAEGMSLT 215

Query: 173 EFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTA 232
           EF Y + QAYDF+ L + Y C +Q+GGSDQ GN++ G DL  ++   +++A+T PL+TT 
Sbjct: 216 EFTYQMFQAYDFLHLHREYRCLIQLGGSDQMGNMMSGHDLVRKVTGKEVYAITVPLVTTT 275

Query: 233 SGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG 292
           SG K+GKT   A+WL+++ TSP+  +Q++    D+ + S+ K  T L M+EI  + +   
Sbjct: 276 SGEKLGKTAGNAVWLSRDKTSPFELYQFFIRQPDSIMESYLKLFTFLSMTEIADIMRKHS 335

Query: 293 KEI--NEAKKIIATEITTMVHGREEAEKA 319
                  A+K +A ++T +VHG    + A
Sbjct: 336 NHPENRLAQKKLAEQVTILVHGVSGLDFA 364



 Score = 41.7 bits (97), Expect = 0.24,   Method: Composition-based stats.
 Identities = 13/82 (15%), Positives = 27/82 (32%), Gaps = 8/82 (9%)

Query: 328 DMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRH--LKSNAIKINNSIIS 385
           +M +     PT  +    +  G+ LL ++VKA       E      +    + INN   +
Sbjct: 453 EMKLLFSEAPTTEMV---LEPGLSLLDVLVKAKALP--GEVTGWHIIADGGVWINNVRQT 507

Query: 386 NEKLQIKLQ-DFDSTGNIKLSF 406
           + +  +             +  
Sbjct: 508 DPRHVVVPSLHILDNNISIVRI 529


>gi|322378582|ref|ZP_08053022.1| tyrosyl-tRNA synthetase [Helicobacter suis HS1]
 gi|321148990|gb|EFX43450.1| tyrosyl-tRNA synthetase [Helicobacter suis HS1]
          Length = 401

 Score =  350 bits (899), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 109/391 (27%), Positives = 188/391 (48%), Gaps = 29/391 (7%)

Query: 32  SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESR 91
           +    +A  G+D TA  LH GH+  L  L  LQ+ G +   ++G  T+ IGDPS + E+R
Sbjct: 35  TSNRFSAKAGFDPTAPDLHLGHMVLLNKLATLQRHGARVQFVIGDFTATIGDPSGKSETR 94

Query: 92  RMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVN 151
           +++  +E+ EN +  K      +          +  N  WL  +    LL  + S FSV 
Sbjct: 95  KILSFEEVLENAKTYKEQVFKILDPDLTD----VCFNSAWLKPLGAEGLL-VLTSKFSVA 149

Query: 152 RMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGID 211
           RML  +    R K  + +S +EF Y +LQ YD V L    +C +++GG+DQ  N++ G  
Sbjct: 150 RMLERDDFEKRYKENKPISVVEFMYPLLQGYDSVAL----ECDIELGGNDQKFNLLVGRF 205

Query: 212 LGERLK-TPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADV 269
           L      + +   LT PLL    G  KM K+L   I ++++   P N +    +I D  +
Sbjct: 206 LQRSYGLSKEQSVLTMPLLEGLDGVHKMSKSLGNYIGVSED---PKNMYAKLLSISDDLM 262

Query: 270 VSFAKRLTTLPMSEID--RMAKLQGK-EINEAKKIIATEITTMVHGREEAEKAATAAMEC 326
             + + L+     +I   +    +GK      K+ +A EI T +H  ++A++A       
Sbjct: 263 WRYYELLSAQTSQQIALLKQGVQEGKLHPKTIKEELALEIITRLHSLKQAQEAKAEFD-- 320

Query: 327 FDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISN 386
               I  + +P+  + + + S G+ + TL+  AG + ST++ARR +K+  ++IN  +I +
Sbjct: 321 ---RISHKQIPS-ELVQMQFSEGVWIGTLLKSAGLSPSTSQARRDIKAGGVRINQVVILD 376

Query: 387 EKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           E+ Q         G+  +  GK+  I   + 
Sbjct: 377 EQYQFSK------GSYVVQVGKRKFIRAIIA 401


>gi|89899538|ref|YP_522009.1| tyrosyl-tRNA synthetase [Rhodoferax ferrireducens T118]
 gi|89344275|gb|ABD68478.1| tyrosyl-tRNA synthetase [Rhodoferax ferrireducens T118]
          Length = 414

 Score =  350 bits (899), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 98/409 (23%), Positives = 173/409 (42%), Gaps = 26/409 (6%)

Query: 15  RGFIHQISNPRELDILCSQG----VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           RG    I     +  L         +   +G D TA  +H GH   L  L  LQ  GH  
Sbjct: 24  RGCEELIPQDDWIKKLARSEATGVPLRIKLGLDPTAPDIHIGHTVVLNKLRQLQDLGHTV 83

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           I L+G  T++IGDPS R+ +R  +  ++I+ N +      S  +     +    +  N  
Sbjct: 84  IFLIGDFTTLIGDPSGRNTTRPPLTREQIEVNAQTYYRQASMVLDPSKTE----IRYNSE 139

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           W  ++    ++ E+ + ++V RM+       R K    +S  EF Y ++Q YD V L  +
Sbjct: 140 WGDTLGSRGMI-ELAAKYTVARMMERNDFHDRFKSGTPISVHEFLYPLMQGYDSVALRSD 198

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNK 249
               L++GG+DQ  N++ G  L           LT PLL    G  KM K+    I +++
Sbjct: 199 ----LELGGTDQKFNLLMGRHLQAEYGQEPQCILTMPLLEGLDGIEKMSKSKGNYIAISE 254

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIATEIT 307
           +  +    +    +I D  +  +   L+    ++I ++      G+   +AK  +A EIT
Sbjct: 255 DANT---MFAKCLSISDVLMWRWYTLLSFRSEADIAKLQAEVTAGRNPKDAKVALAKEIT 311

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
              H    AE A    +           +  +++S  +    +G+  L+  AG A S+ E
Sbjct: 312 ARFHSAAAAEAAEQDFVNR-SRGGVPDEIAEVALSLGDGGAPLGIGALLKLAGLAASSGE 370

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             R +    ++I+ S++S++ L++        G   +  GK+      L
Sbjct: 371 GNRLIDGGGVRIDASVVSDKGLKL------GAGTYVVQVGKRKFARVTL 413


>gi|169596004|ref|XP_001791426.1| hypothetical protein SNOG_00750 [Phaeosphaeria nodorum SN15]
 gi|160701208|gb|EAT92245.2| hypothetical protein SNOG_00750 [Phaeosphaeria nodorum SN15]
          Length = 539

 Score =  350 bits (899), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 141/505 (27%), Positives = 224/505 (44%), Gaps = 97/505 (19%)

Query: 9   LSILSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           LS+L ERGF+  ++  R+ LD + ++  + AY+G D TA SLH GHL   M LFW+   G
Sbjct: 2   LSVLEERGFVKDVAGERKTLDWVLTEKPIGAYVGVDPTAPSLHVGHLLPFMALFWMYLHG 61

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSF--------IKYGTG 119
           +   SL+GGGT+ IGDPS R  +R    +   + N + +     +         IK+   
Sbjct: 62  YNTFSLLGGGTATIGDPSGRTTARSSQAANIQRHNSKNMHIQLRNLWTNVKCLGIKHQYS 121

Query: 120 KTDALM---LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNY 176
              +     LNNETWL  +  IDL+R +GS   +  ML+ +SV+ R++  + ++  EF+Y
Sbjct: 122 NAISWKKEPLNNETWLQQLSAIDLMRGLGSGMRLGAMLARDSVKVRMENGEGMAMSEFSY 181

Query: 177 MILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP---------------KL 221
            + QAYD+  + +    +LQ+GGSDQ+GNI  G+D    ++                   
Sbjct: 182 PLFQAYDWWHMYQRNGVQLQIGGSDQYGNICAGMDAISYMRRAGDHHSNSELDENPLRAT 241

Query: 222 FALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPM 281
           + LT+PLLTTASG K GK+   A+WL+ +M S ++ +QY+    D DV  + K  T LP+
Sbjct: 242 YGLTTPLLTTASGEKFGKSAGNAVWLDPKMLSSFDLYQYFVKTADNDVERYLKLFTFLPI 301

Query: 282 SEIDRMAKLQGKE--INEAKKIIATEITTMVHGREEAEKAATAAMECFDMS--------- 330
           ++I+ +   Q K+     A+ I+A EI  + HG + A+ A  A  E F            
Sbjct: 302 NQINLLMAQQRKDESKRLAQHILAKEIVELAHGAKSAKMAEEAHKEAFSHGTNTFSLGAL 361

Query: 331 ------IHSQHMPT--------------------------------------ISISKDEV 346
                 I   + P                                       +++ K  +
Sbjct: 362 RNSMSNIKPANAPNPEHLSKSEQAELAHKESLGLSANAQESGTTSALSKQKIVTLPKTLL 421

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKI---N-NSIIS---------NEKLQIKL 393
             G     ++  AG A+S +EA R +      +   N  S  +              +  
Sbjct: 422 QPG-SFPRILCAAGLASSRSEAHRLIACKGAYVVVPNSGSPETPTALQWINIEAGATVNP 480

Query: 394 QDFDST-GNIKLSFGKKNHIICHLC 417
             +      + L  GK    ICH+ 
Sbjct: 481 SHYLVDWDALVLRSGKSKIQICHIV 505


>gi|57234594|ref|YP_181343.1| tyrosyl-tRNA synthetase [Dehalococcoides ethenogenes 195]
 gi|115305803|sp|Q3Z8V6|SYY_DEHE1 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|57225042|gb|AAW40099.1| tyrosyl-tRNA synthetase [Dehalococcoides ethenogenes 195]
          Length = 396

 Score =  350 bits (899), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 104/415 (25%), Positives = 182/415 (43%), Gaps = 27/415 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M   ++    IL  RG    I       +L S   +    G+D ++  +H GH+  L  L
Sbjct: 1   MNQAENRIDQILK-RGVAEVIVEEDFKKLLLSGKKLRLKEGFDPSSPDIHLGHMVALRKL 59

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             LQ  GH+ + ++G  T+ IGDPS    +R M+ +++++ N +     F   +     +
Sbjct: 60  RQLQDLGHQVVLIVGDWTAQIGDPSGASVTRPMLSAEQVKANAKTYLEQFFKIVDKDKTE 119

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
                     W  + K  D++R + S F+V +ML+ +    R    + +S  E  Y +LQ
Sbjct: 120 VRWQ----SEWYANFKLEDVVR-LSSKFTVAQMLARDDFAKRYAAGKPISVTELLYPMLQ 174

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGK 239
           AYD V +  +    ++ GG+DQ  N++ G +L E L       L  P+L    G  KM K
Sbjct: 175 AYDSVMVKSD----VEFGGTDQKFNLLVGRELQEMLGQKPQQVLMVPILVGTDGVHKMSK 230

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EIN 296
           +L   I + +E   P   +    +I D  ++ + + +T +P +EI               
Sbjct: 231 SLGNYIGVAEE---PTEIFGKCMSIPDELILQYFELVTDIPATEIADFKNQMANGLVNPM 287

Query: 297 EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLI 356
             KK +A E+ T ++    AE+A              + MP   +   E    + ++  I
Sbjct: 288 VLKKRLARELITQLYSAAAAEEADAQFTRVVQRGEIPEDMPECRL---ENGESICVIDFI 344

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           +KA  A S +EARR L+   ++IN++ IS+    +K  D        +  GK+ +
Sbjct: 345 IKADLAKSKSEARRLLEQGGVEINSAKISDPGTTVKCGD-------IIKAGKRRY 392


>gi|302335393|ref|YP_003800600.1| tyrosyl-tRNA synthetase [Olsenella uli DSM 7084]
 gi|301319233|gb|ADK67720.1| tyrosyl-tRNA synthetase [Olsenella uli DSM 7084]
          Length = 405

 Score =  350 bits (898), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 104/402 (25%), Positives = 168/402 (41%), Gaps = 21/402 (5%)

Query: 20  QISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGT 78
           QI    EL     +G  +   +G D T+  LH GH   L  +   Q  GHK   ++G GT
Sbjct: 17  QIVPMDELRHKLEKGVPLNIKLGVDPTSPDLHLGHAVPLRKMRQFQDFGHKVTLIIGNGT 76

Query: 79  SIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYI 138
           ++IGDPS RD +R  +  ++++ N +         +          +++N  WL  +   
Sbjct: 77  ALIGDPSGRDSTRPPLTEEQVEANAQTYVEQAMKVLD----PQKTAIVHNGDWLKPLDLA 132

Query: 139 DLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMG 198
            +L E+ S F+V R+L  E   +R     S+S  EF Y +LQAYD V +  +    L+MG
Sbjct: 133 KML-ELMSRFNVARILEREDFHNRYTGGLSISLHEFIYPVLQAYDSVVVKAD----LEMG 187

Query: 199 GSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNF 257
           G+DQ  N++ G DL   +      ALT PLL    G  KM K+    + L        + 
Sbjct: 188 GNDQIFNLLAGRDLMRSMGMEPQVALTVPLLVGLDGHKKMSKSYKNYVGLT---DGSNDM 244

Query: 258 WQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG---KEINEAKKIIATEITTMVHGRE 314
           +    +I D  V  + +  +TL + EID +         +    K+ +A  I  + HG  
Sbjct: 245 YGKLMSIADEIVPMYFRLCSTLSVDEIDAIDAAYADGSADPYRLKRQLARNIVDLYHGDG 304

Query: 315 EAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG--MGLLTLIVKAGFATSTNEARRHL 372
             + A  A    F  +     +    +S   V+    + L  L+     A S  EARR +
Sbjct: 305 AGDAAEAAFDAQFKQNKVPDDIAEFPLSVAAVNDEGKVYLAKLLSDVKIAQSAGEARRLI 364

Query: 373 KSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
               +K++   +  +   +    F       +  GKK     
Sbjct: 365 DGGGVKVDGVAMERKVYNVDPALFSVG--TVIQSGKKRWARL 404


>gi|121707082|ref|XP_001271726.1| tyrosyl-tRNA synthetase, mitochondrial precursor (tyrosine--tRNA
           ligase) (tyrrs) [Aspergillus clavatus NRRL 1]
 gi|119399874|gb|EAW10300.1| tyrosyl-tRNA synthetase, mitochondrial precursor (tyrosine--tRNA
           ligase) (tyrrs) [Aspergillus clavatus NRRL 1]
          Length = 622

 Score =  349 bits (897), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 113/445 (25%), Positives = 198/445 (44%), Gaps = 72/445 (16%)

Query: 5   KSDFLSILSERGFIHQISNPREL-DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           +  F+  L ERG IH +   R+L + + ++     Y+G D TA SLH GH+   ++L W 
Sbjct: 91  RKSFIRHLEERGLIHDVVGERDLLERIFTEKRAGIYVGIDPTAPSLHVGHMLPFIILAWG 150

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSF--------IK 115
              G     L+GG TS +GDP+ R + R  M +   + N+  +               ++
Sbjct: 151 YVWGLPVTYLIGGATSKVGDPTGRLKGREQMNASVRKANMANMHMQLKKLGVSAELYGVE 210

Query: 116 YGTGKTDAL---MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFL 172
           +G  K       + NN  W     +ID+LR++G+   +  ML  E+V++RL +   +SF 
Sbjct: 211 HGYKKERFWKRALANNSIWWNGTAFIDVLRDLGNHVRLGPMLGRETVKNRLAKGDGMSFA 270

Query: 173 EFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL---------------K 217
           EF+Y ++QA+D+  L +    ++Q+GGSDQ+GNI+ G++  + +                
Sbjct: 271 EFSYPLMQAWDWWVLFRK-GVQVQVGGSDQYGNILFGMEAVKMISKNTPIEEDQNPLEDD 329

Query: 218 TPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT 277
             K    T+PLLT  +G K GK+   A+WL+K+MTS +  +Q++    D  V S+ K  T
Sbjct: 330 LDKPIGFTTPLLTAPNGEKFGKSAGNAVWLDKDMTSTFELYQFFVRTPDDVVESYLKMFT 389

Query: 278 TLPMSEIDRM--AKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQH 335
            LP+ +I  +   ++Q      A+  +A E   +VHG++EA+  AT   + F     +  
Sbjct: 390 FLPLPKIAEIMAEQIQDPSKRVAQHTLAHEFLWLVHGKKEADAVATQHRQLFRSRTSTAE 449

Query: 336 M-----------------------------------------PTISISKDEVSRGMGLLT 354
                                                     P +++ +  +        
Sbjct: 450 PTPLPKVSSPPSSHANSPTAGFVNPQSGNKYAPQTNFANMGSPHVTLPRS-LVFNQPFHK 508

Query: 355 LIVKAGFATSTNEARRHLKSNAIKI 379
           ++  AG   S +E  R + +    +
Sbjct: 509 ILWHAGLVASKSEGHRIVANKGAYV 533


>gi|284928651|ref|YP_003421173.1| tyrosyl-tRNA synthetase [cyanobacterium UCYN-A]
 gi|284809110|gb|ADB94815.1| tyrosyl-tRNA synthetase [cyanobacterium UCYN-A]
          Length = 403

 Score =  349 bits (897), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 100/386 (25%), Positives = 174/386 (45%), Gaps = 23/386 (5%)

Query: 32  SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESR 91
           S   +   +G D T S +H GH      L   Q  GH  + ++G  T+ IGDP+ + E R
Sbjct: 35  SDRPLRVKLGIDPTGSDIHLGHSIPFRKLRAFQDAGHTAVVIIGDFTAQIGDPTGKSEVR 94

Query: 92  RMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVN 151
           + + S+++++N+E      SS + + T      +  N  W   + +  + +E+ S  +V+
Sbjct: 95  KQLNSKQVEKNVESYLEQLSSVLDFSTP-GRLEIRYNSEWFNKLDFHKV-QELLSTMTVS 152

Query: 152 RMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGID 211
           +ML+ E    R K+E  +   EF Y ++Q YD V +  +    +++GG+DQ  NI  G D
Sbjct: 153 QMLAKEGFSERYKKENPIFLHEFLYPLMQGYDSVVVNAD----VELGGTDQKFNIAVGRD 208

Query: 212 LGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVV 270
           L         F L  P+LT   GT KM K+L   I L ++     + +     I D  V 
Sbjct: 209 LQRHFGQKPQFGLLLPILTGTDGTQKMSKSLGNYIGLKEDAL---SMYSKIEKIPDTLVQ 265

Query: 271 SFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFD-- 328
           ++ + LT L ++E+        K+  E +K++ATEIT+  HG E+A  A   A       
Sbjct: 266 NYFELLTNLDLNEL-------PKDSRELQKLLATEITSHYHGEEKALSAKKTAENLVKNR 318

Query: 329 MSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEK 388
            S+ +  +   ++S   V     L  ++  +    S+ E RR ++  ++++    I +  
Sbjct: 319 NSLLTDTITEFNLSN--VVFPAKLFYILSASKLCVSSGEGRRQIQGGSVRLEGEKILDVN 376

Query: 389 LQIKLQDFDSTGNIKLSFGKKNHIIC 414
           L     +        L  GK      
Sbjct: 377 LVFDNPEQLDNK--VLQVGKTKFTRL 400


>gi|291295232|ref|YP_003506630.1| tyrosyl-tRNA synthetase [Meiothermus ruber DSM 1279]
 gi|290470191|gb|ADD27610.1| tyrosyl-tRNA synthetase [Meiothermus ruber DSM 1279]
          Length = 426

 Score =  349 bits (897), Expect = 4e-94,   Method: Composition-based stats.
 Identities = 102/430 (23%), Positives = 179/430 (41%), Gaps = 46/430 (10%)

Query: 16  GFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMG 75
           G +  I     L  L S   +T  +G D T   +H GH   L  +   Q+ GHK + ++G
Sbjct: 13  GAVEIIPQEDLLKKLHSGKKLTVKLGLDPTRPDIHIGHAVVLRKMRQFQELGHKVVLIIG 72

Query: 76  GGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSI 135
             T++IGDPS R ++R  +  +E + N +         +   T      +  N  WL ++
Sbjct: 73  DFTAMIGDPSGRSKTRPPLTLEETRANAKSYVEQVGKIL-ITTDPARFELRYNSEWLENL 131

Query: 136 KYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRL 195
            + +++R + S  +V +ML  E  + R      +S  EF Y   Q YD V +A    C +
Sbjct: 132 GFKEVIR-LTSLLTVAQMLEREDFKKRYTEGVPISIHEFLYPFAQGYDSVPIA----CDV 186

Query: 196 QMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPY 255
           +MGG+DQ  N++ G ++       K  A   PLL    G KM K+    I + +E   P 
Sbjct: 187 EMGGTDQKFNLLVGREVQAAYGLEKQVAFLMPLLVGGDGQKMSKSYDNYIGITEE---PS 243

Query: 256 NFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMV----- 310
             ++    ++D  + ++ +  T L   EI     L+      A +++A  +T        
Sbjct: 244 EIFRKLMKVEDPYLQTYFELCTDLAPEEIKE--VLEQGGPVGAHRVLARLLTGAYAQPLI 301

Query: 311 ------------------HGREEA-----EKAATAAMECFDMSIHSQHMPTISISKDEVS 347
                             HG ++       +A     E     I  + MP + +   E+ 
Sbjct: 302 PARLDKAWYESLGYSWEAHGHDQGGAPVVRQAEARYYEIAHGGI-PEQMPEVRLQASELL 360

Query: 348 RG-MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            G + +L L   AG   S  EARR ++   ++++  ++++ KL++ L        + L  
Sbjct: 361 EGRIAVLKLFTLAGLTASNGEARRLIEQKGLRLDGQVLTDPKLEVVLS-----QPVVLQR 415

Query: 407 GKKNHIICHL 416
           GK   +   L
Sbjct: 416 GKDKFVRVVL 425


>gi|218294915|ref|ZP_03495769.1| tyrosyl-tRNA synthetase [Thermus aquaticus Y51MC23]
 gi|218244823|gb|EED11347.1| tyrosyl-tRNA synthetase [Thermus aquaticus Y51MC23]
          Length = 433

 Score =  349 bits (896), Expect = 5e-94,   Method: Composition-based stats.
 Identities = 98/438 (22%), Positives = 173/438 (39%), Gaps = 50/438 (11%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG    I     L+ L     +T  +G D T   LH GH   L  +   Q+ GH+ +
Sbjct: 14  LLKRGAEEIIPEEELLEKLKEGRPLTVKLGADPTRPDLHLGHAVVLRKMRQFQELGHRVV 73

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            ++G  T +IGDPS R ++R  +  +E +EN           ++         +  N  W
Sbjct: 74  LIIGDFTGMIGDPSGRSKTRPPLTLEETRENARTYVEQAGKILRQEPEL--FELRYNSEW 131

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L  + + +++R + S  +V +ML  E  + R +    +S  EF Y   QAYD V +  + 
Sbjct: 132 LEGLTFKEVVR-LTSLMTVAQMLEREDFKKRYQEGIPISLHEFLYPFAQAYDSVAIRAD- 189

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKE 250
              ++MGG+DQ  N++ G ++              PLL    G  KM K+L   I + + 
Sbjct: 190 ---VEMGGTDQRFNLLVGREVQRAYGQSPQVCFLMPLLVGLDGQEKMSKSLDNYIGVAEP 246

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMV 310
              P   ++    + D  +  + + LT L     + +  L       A +++A  +T   
Sbjct: 247 ---PEVMFKKLMRVPDPLLEDYFRLLTDLEE---EEIEALLKAGPVPAHRVLARILTAAY 300

Query: 311 -----------------------------HGREEAEKAATAAMECFDMSIHSQHMPTISI 341
                                         G EE  +A     E        + +P + I
Sbjct: 301 ARPQIPPRIDRAFYESLGYRLEALGRDKEAGPEEVRRAEARYDEV-AKGGIPEEIPEVEI 359

Query: 342 SKDEVSRG-MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG 400
              E+  G + +  L   AG   S  EARR +++  ++++  ++ +  L++ L       
Sbjct: 360 PASELREGRIWVARLFTLAGLTPSNAEARRLIQNRGLRMDGEVVEDPNLEVDLS-----R 414

Query: 401 NIKLSFGKKNHIICHLCG 418
            + L  GK   +   L G
Sbjct: 415 PLVLQRGKDRFVRVRLQG 432


>gi|308189596|ref|YP_003922527.1| tyrosine--tRNA ligase [Mycoplasma fermentans JER]
 gi|319776747|ref|YP_004136398.1| tyrosyl-tRNA synthetase [Mycoplasma fermentans M64]
 gi|307624338|gb|ADN68643.1| tyrosine--tRNA ligase [Mycoplasma fermentans JER]
 gi|318037822|gb|ADV34021.1| Tyrosyl-tRNA synthetase [Mycoplasma fermentans M64]
          Length = 411

 Score =  349 bits (896), Expect = 5e-94,   Method: Composition-based stats.
 Identities = 125/420 (29%), Positives = 223/420 (53%), Gaps = 25/420 (5%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L  RG + QISN  +   L     V  Y G+D TA SLH G+   + +L   ++ G
Sbjct: 3   ILEDLKLRGILKQISNEDKFKKL-DPKKVAVYCGFDPTAQSLHLGNYVLISVLKRFKQYG 61

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
            K   L+GG T +IGDPSF+D  R ++ ++ ++ N  KI+    +            +++
Sbjct: 62  FKVYGLIGGATGMIGDPSFKDSERVLLDNKTLKLNKSKIRKQLEAQ--------GLEVID 113

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  +   +  ++ LR+ G   +V+ M++ +SV+ R++R   LSF EF+Y +LQ +DF++L
Sbjct: 114 NIQFYEKMNVLEFLRDAGKLVNVSYMMTKDSVQKRIER--GLSFTEFSYQVLQGWDFLQL 171

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSGA- 244
            KNY+  +Q+GGSDQWGN+  G+++  +++    K   +T+ LLT  +G K+GK+  G  
Sbjct: 172 YKNYNIMIQVGGSDQWGNLTTGLEMISKVEGDDHKAVVVTADLLTDENGNKIGKSTGGGK 231

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKII 302
           +WL+K M SPY  +QY  N  D+ V +F   LT L   +I ++ +   +    + A++++
Sbjct: 232 LWLDKTMASPYEMYQYLLNQPDSKVETFLNWLTFLDNKKIAKIMEEHNQAPFKHVAQRVV 291

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHS-----QHMPTIS--ISKDEVSRGMGLLTL 355
           A+E+   + G++E + A       F+ +  +     + + +I   +   E+ +   ++  
Sbjct: 292 ASEVVRDIFGQDELDSAIQITEVLFNKNFDTSKLNLKDLKSIEQYLPVVEIKQNQNIIET 351

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +++ GF  S  EAR  + + A+KI+  I+  E    K ++F S        GKK  I+  
Sbjct: 352 LIEKGFIASKREAREFMATKALKIDEDIVE-ENSVYKPKNF-SKKYAFFRKGKKQTILLK 409


>gi|238810146|dbj|BAH69936.1| hypothetical protein [Mycoplasma fermentans PG18]
          Length = 431

 Score =  349 bits (896), Expect = 5e-94,   Method: Composition-based stats.
 Identities = 125/420 (29%), Positives = 223/420 (53%), Gaps = 25/420 (5%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L  RG + QISN  +   L     V  Y G+D TA SLH G+   + +L   ++ G
Sbjct: 23  ILEDLKLRGILKQISNEDKFKKL-DPKKVAVYCGFDPTAQSLHLGNYVLISVLKRFKQYG 81

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
            K   L+GG T +IGDPSF+D  R ++ ++ ++ N  KI+    +            +++
Sbjct: 82  FKVYGLIGGATGMIGDPSFKDSERVLLDNKTLKLNKSKIRKQLEAQ--------GLEVID 133

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  +   +  ++ LR+ G   +V+ M++ +SV+ R++R   LSF EF+Y +LQ +DF++L
Sbjct: 134 NIQFYEKMNVLEFLRDAGKLVNVSYMMTKDSVQKRIER--GLSFTEFSYQVLQGWDFLQL 191

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSGA- 244
            KNY+  +Q+GGSDQWGN+  G+++  +++    K   +T+ LLT  +G K+GK+  G  
Sbjct: 192 YKNYNIMIQVGGSDQWGNLTTGLEMISKVEGDDHKAVVVTADLLTDENGNKIGKSTGGGK 251

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKII 302
           +WL+K M SPY  +QY  N  D+ V +F   LT L   +I ++ +   +    + A++++
Sbjct: 252 LWLDKTMASPYEMYQYLLNQPDSKVETFLNWLTFLDNKKIAKIMEEHNQAPFKHVAQRVV 311

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHS-----QHMPTIS--ISKDEVSRGMGLLTL 355
           A+E+   + G++E + A       F+ +  +     + + +I   +   E+ +   ++  
Sbjct: 312 ASEVVRDIFGQDELDSAIQITEVLFNKNFDTSKLNLKDLKSIEQYLPVVEIKQNQNIIET 371

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +++ GF  S  EAR  + + A+KI+  I+  E    K ++F S        GKK  I+  
Sbjct: 372 LIEKGFIASKREAREFMATKALKIDEDIVE-ENSVYKPKNF-SKKYAFFRKGKKQTILLK 429


>gi|297170312|gb|ADI21348.1| tyrosyl-tRNA synthetase [uncultured gamma proteobacterium
           HF0010_10D20]
          Length = 404

 Score =  349 bits (896), Expect = 5e-94,   Method: Composition-based stats.
 Identities = 107/414 (25%), Positives = 184/414 (44%), Gaps = 27/414 (6%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            + +RG    I       +L S+  +T   G+D T++ LH GH   +  L   Q  GH  
Sbjct: 10  EIIKRGSDEIIPEDAFKKLLTSKKKLTVKAGFDPTSADLHLGHTVLINKLKAFQDLGHTV 69

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           I L+G  T +IGDPS  +E+R  +  +++ EN +         +     K    +  N +
Sbjct: 70  IFLIGDFTGLIGDPSGVNETRPNIDEKKLAENSKTYADQVFKILD----KKKTKIKFNSS 125

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           W   +K  + +R + S  +V RML  +  + R +  + +S  EF Y ++Q +D   L  +
Sbjct: 126 WFKKMKLDEFIR-LSSIMTVARMLERDDFKKRYENNKPISLHEFLYPLVQGFDSYALKAD 184

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNK 249
               +++GG+DQ  N++ G ++ +     +   +T PLL    G  KM K+L+  I LN 
Sbjct: 185 ----IELGGTDQKFNLLVGREVQKHFGQDEQVTITVPLLEGLDGVKKMSKSLNNYIALND 240

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEIT 307
           E   P   +    +I D  +  +   L+     EI   R     G+     KK +ATEI 
Sbjct: 241 E---PNEMFGKIMSISDNLMWRYFDLLSFRSNDEIASFRDKVKNGENPMTFKKKLATEIV 297

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV--KAG--FAT 363
              + ++ +E A  A    F   +    +P   I++   +  + ++ L+     G  F  
Sbjct: 298 ERFYDKKSSENAEIAFTNVFSNKLEPSEVPIFEINE---TSSISIVELLTHEDLGNEFIQ 354

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           S +E RR +K + IK+NN  + N  L I L + +         GK+ H+   L 
Sbjct: 355 SKSECRRLIKQSGIKMNNKKVENPDLLINLGEENY-----FQIGKRKHLKIKLV 403


>gi|297170374|gb|ADI21408.1| tyrosyl-tRNA synthetase [uncultured gamma proteobacterium
           HF0010_21A16]
          Length = 404

 Score =  349 bits (895), Expect = 6e-94,   Method: Composition-based stats.
 Identities = 110/425 (25%), Positives = 188/425 (44%), Gaps = 32/425 (7%)

Query: 4   FKSD--FLSILSERGFIHQISNPRELDILC-SQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
            KS+   L IL ERG + +I   ++   L  S+  +    G+D T+S LH GH   L  L
Sbjct: 1   MKSNKEILEIL-ERG-VEEIIPEKDFRSLLRSKKKLIIKAGFDPTSSDLHLGHTVLLNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GHK I L+G  T  IGDPS  +E+R  +   ++++N +         +     K
Sbjct: 59  KQFQDLGHKIIFLIGDFTGQIGDPSGVNETRPSVSKSDLKKNAKTYSEQVFKILDSKKTK 118

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N +W   +K  ++++ + S  +V RML  +   +R K  + +S  E  Y ++Q
Sbjct: 119 ----IEYNSSWFDKMKPSEIIK-LASSMTVARMLERDDFSNRFKGNRPISIHELLYPLVQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGK 239
            YD   L  +    +++GG+DQ  N++ G D+    K  +   +T P+L    G  KM K
Sbjct: 174 GYDSYALKAD----IELGGTDQKFNLLVGRDIQRSNKMKEQVVMTMPILEGLDGVKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINE 297
           +L+  I L      P   +    +I D  +  +   L+  P   I+       +G    E
Sbjct: 230 SLNNYIGL---KEKPEMMFGKIMSISDELMWKYYDLLSFKPNKVINSYKAEVKKGANPME 286

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K ++  EI    H ++ A+         F        +  +SI  +  +  + L+ L+ 
Sbjct: 287 FKILLGEEIVERFHSKKAAQDTKEEFKNRFSKKKAPSKIKKVSIKIN--AEDISLIDLLA 344

Query: 358 KAG-----FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           +         +S +EARR +K +A+KI+N+ I++EK  +K              GK  H+
Sbjct: 345 EPKLKKNILCSSKSEARRMIKQSAVKIDNNRINDEKFFVK-----KGSKHTFQVGKHKHL 399

Query: 413 ICHLC 417
           I  L 
Sbjct: 400 IIDLT 404


>gi|261416275|ref|YP_003249958.1| tyrosyl-tRNA synthetase [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|261372731|gb|ACX75476.1| tyrosyl-tRNA synthetase [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|302327342|gb|ADL26543.1| tyrosine--tRNA ligase [Fibrobacter succinogenes subsp. succinogenes
           S85]
          Length = 405

 Score =  349 bits (895), Expect = 6e-94,   Method: Composition-based stats.
 Identities = 101/417 (24%), Positives = 180/417 (43%), Gaps = 30/417 (7%)

Query: 9   LSILSERGFIHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           L IL  RG +  I    EL+    +       +   +G D TA  +H GH   +  L   
Sbjct: 10  LEILM-RG-VTDIVPQDELEKKLQKSYETGKPLRIKMGVDPTAPDVHFGHTVVMRKLRQF 67

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q  GH  + ++G  T+ IGDPS R+++R  +  +++ EN ++ +  F   ++        
Sbjct: 68  QDLGHTVVLIVGDYTAQIGDPSGRNKARPRLTHEQVLENAKEYQEQFFKVVRRD----QV 123

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            +  N  W   + +  +   +G  F+V +ML  E   +R      +S  EF Y ++Q YD
Sbjct: 124 EIHYNGEWFSKLPFSKVTELMG-QFTVAQMLEREDFHNRYTANTPISLHEFMYPMMQGYD 182

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLS 242
            V +  +    +++GG+DQ  N++ G DL           L  P+L    G  KM K++ 
Sbjct: 183 SVAIQSD----VELGGTDQKFNVLRGRDLQIFEGMEPQIGLFMPILLGTDGKVKMSKSIG 238

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAK 299
             + LN+        +    ++ D  V ++ + LT +P+ E+ +M           N+AK
Sbjct: 239 NYVGLNEPADV---MYHKIYSLSDNIVENWYELLTNIPLDEVKQMMADIAAGKMNPNDAK 295

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKA 359
             +A +I T  +G E AE AA    E    +         S+         G L L+V  
Sbjct: 296 HRLAIDIVTQYYGAEAAEAAAAKEREIHSGNAIPSDALECSVDAGSY----GALDLLVNI 351

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
               S  EARR +++  +KI    +++ + QI+++       + +  GK+     + 
Sbjct: 352 KAFASKGEARRMVQNGGVKIGGEKLADPQAQIEIK---GGDQLVVQVGKRKFFKVNF 405


>gi|190347206|gb|EDK39441.2| hypothetical protein PGUG_03540 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 604

 Score =  348 bits (894), Expect = 8e-94,   Method: Composition-based stats.
 Identities = 121/469 (25%), Positives = 194/469 (41%), Gaps = 65/469 (13%)

Query: 2   PAFKSDFLSILSERGFIHQISNPRE--LDILCSQGVVTAYIGYDLTASSLHAGHLTQLML 59
               +  +  L  R  I   ++     L      G +  Y G D +A SLH G+L   M+
Sbjct: 139 SDLSTSLVRHLQSRYLIEGSTHEELFHLSEPGKSGQLKLYCGADPSAKSLHIGNLLPFMV 198

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK---- 115
           +   +  G+  + L+GG T  +GDPS R + R  + S E  +N+ +I+     F+     
Sbjct: 199 MLHFRLRGYDVVGLIGGATGAVGDPSGRSKERAQIESDERADNVARIESQIRQFLNNGVE 258

Query: 116 --------YGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ 167
                   +      +++ NN  W  SI  +D L + G    V  ML+ +S++SRL  + 
Sbjct: 259 YARSRNYPFPGDVGKSVVRNNADWWKSIGMLDFLAKYGRHIRVTNMLARDSIQSRLSSQG 318

Query: 168 SLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLG----------ERLK 217
            L F EF Y +LQAYDF EL K     LQ+GG+DQWGNI  GIDL           +  K
Sbjct: 319 GLGFNEFTYQVLQAYDFWELYKTEGVNLQIGGNDQWGNITAGIDLISRLHKLEPQTKERK 378

Query: 218 TPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT 277
               + +T PLLTT SG K GK+   A++++  +TSPY  +QY+    D  V    K  T
Sbjct: 379 DKNAYGITVPLLTTPSGEKFGKSAGNAVFIDPSITSPYQLYQYFIQTPDEIVGKLLKVFT 438

Query: 278 TLPMSEIDRM---AKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQ 334
            LP+  +D        +      A++++A E+  +VHG    ++ A      F       
Sbjct: 439 LLPLHSVDEHILPDHEKDPGSRIAQRVLAREVVDLVHGVGVGDQMAYITSFLF------- 491

Query: 335 HMPTISISKDEVSRGMGLLTLIVKAGFA------------------------TSTNEARR 370
             PT     D+      L+    ++G                           S  E + 
Sbjct: 492 --PTPDQPFDDEISAAKLIENFKRSGILVHLDSTQVKFNDLKMSTLLSKVMNKSKTETKN 549

Query: 371 HLKSNAIKINNSI--ISNEKLQI---KLQDFDSTGNIKLSFGKKNHIIC 414
            +K+  I +      + +    +   K         + +  GK+N+ + 
Sbjct: 550 LIKNGGIYLGLEREQLQDPDDVVLFDKENHLIDNKLLLVRSGKQNYYVV 598


>gi|311070362|ref|YP_003975285.1| tyrosyl-tRNA synthetase [Bacillus atrophaeus 1942]
 gi|310870879|gb|ADP34354.1| tyrosyl-tRNA synthetase [Bacillus atrophaeus 1942]
          Length = 414

 Score =  348 bits (894), Expect = 9e-94,   Method: Composition-based stats.
 Identities = 96/408 (23%), Positives = 172/408 (42%), Gaps = 29/408 (7%)

Query: 19  HQISNPRELDILCSQG-----VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
            ++  P EL    ++       +   +G D +A  +H GH   L  L   Q+TGH    L
Sbjct: 26  QEVIPPEELRTKIAKSVATGMPLKIKLGLDPSAPDVHLGHTVVLNKLRQFQETGHIVQLL 85

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
           +G  T  IGDP+ +  +R+ +  +E+Q N +     F   +     K    +  N  WL 
Sbjct: 86  IGDFTGKIGDPTGKSTARKQLTDEEVQHNAKTYFEQFGKVLD----KEKVELHYNSKWLK 141

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDC 193
            +   D++ E+    +V R++  +    R+  ++ +S  EF Y ++Q YD V L  +   
Sbjct: 142 ELNLEDVI-ELAGKITVARLMERDDFEERIAMQKPISLHEFFYPLMQGYDSVVLESD--- 197

Query: 194 RLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMT 252
            +++GG+DQ  N++ G    ER K  K   +  PLL    G  KM K+    I +++   
Sbjct: 198 -IELGGTDQHFNVLMGRHFQERYKKEKQVVILMPLLEGLDGVEKMSKSKHNYIGIDEN-- 254

Query: 253 SPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAKKIIATEITTM 309
            P + +    ++ D+ +  +    T L + +  R+ K          +AK  +   I  M
Sbjct: 255 -PNDMYGKTMSLPDSLMKKYIHLATDLELEDKKRLVKDLETGALHPRDAKMFLGKTIVRM 313

Query: 310 VHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEAR 369
            HG E AE A       F  +   + + T+    D+      ++ L+V      S +EAR
Sbjct: 314 YHGEEAAEAAEQQFKRVFQQNSLPEDIATVHWKGDQT---TPIIDLLVTLELLPSKSEAR 370

Query: 370 RHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           R +++  +KIN     N        D      + +  GK+  +   + 
Sbjct: 371 RMIQNGGVKINGEKAENIHA-----DIQVLPQMTIQVGKRKFVRLTVS 413


>gi|260942949|ref|XP_002615773.1| hypothetical protein CLUG_04655 [Clavispora lusitaniae ATCC 42720]
 gi|238851063|gb|EEQ40527.1| hypothetical protein CLUG_04655 [Clavispora lusitaniae ATCC 42720]
          Length = 524

 Score =  348 bits (894), Expect = 9e-94,   Method: Composition-based stats.
 Identities = 121/470 (25%), Positives = 208/470 (44%), Gaps = 56/470 (11%)

Query: 3   AFKSDFLSILSERGFIHQISNPR--ELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
            F+   ++ L  R  I  +++    ++    ++  +  Y G D TA SLH G+L  LM+L
Sbjct: 55  DFQGSLVAHLYSRNLIETLTSDDLYKITEHGNKQKLKLYCGADPTAESLHLGNLLPLMVL 114

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY---- 116
                 GH  + L+GG T ++GDPS R   R  M + + ++N+  I+    +F+K     
Sbjct: 115 LHFVLRGHDVVGLVGGATGVVGDPSGRTSERSAMEAAQREKNVRIIQEQIQTFLKRGIDY 174

Query: 117 -----------GTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR 165
                       +       +NN  W  S+K +D L   G    V++ML+ +S+ SRL+ 
Sbjct: 175 AKSRNIEIAKDDSKLGSIQSVNNADWWKSVKLLDFLATYGRHIRVSQMLARDSISSRLES 234

Query: 166 EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-------- 217
           +Q + F EF Y ILQAYDF  L +N    LQ+GG+DQWGNI  GIDL  RL+        
Sbjct: 235 QQGIGFNEFTYQILQAYDFWHLFQNEGVNLQIGGNDQWGNITAGIDLISRLQKSTETKSK 294

Query: 218 -----TPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSF 272
                    F +T PLLTT SG K GK+   A++++++ T+P+  +Q++ N  D  V   
Sbjct: 295 AEKEHDSSAFGITVPLLTTPSGQKFGKSAGNAVFISEKSTTPFQMYQFFINSQDEMVFKL 354

Query: 273 AKRLTTLPMSEID---RMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDM 329
            K +T LP+  I+        +   +  A++I+A E+  ++HG    ++ A      F  
Sbjct: 355 LKIMTLLPLEAIETVIVPKHEKDPGLRIAQRILAREVVDLIHGNGVGDEMAYITSFLFPT 414

Query: 330 SIHSQH-----------------MPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHL 372
                                  +  + +S       + + TL+       S NE +  +
Sbjct: 415 PDQPFDDDITADKLISKFRKSGILRALKLSSFPDPTDLKMSTLLSSV-LEMSKNETKALI 473

Query: 373 KSNAIK--INNSIISNEKLQI---KLQDFDSTGNIKLSFGKKNHIICHLC 417
           ++  +   I+     +    +   K         + +  GK+ + +  + 
Sbjct: 474 RAGGVYLGIDRRQFVDPDDVVLFDKENHLIDGKLLLVRTGKQKYYVVEVS 523


>gi|269837291|ref|YP_003319519.1| tyrosyl-tRNA synthetase [Sphaerobacter thermophilus DSM 20745]
 gi|269786554|gb|ACZ38697.1| tyrosyl-tRNA synthetase [Sphaerobacter thermophilus DSM 20745]
          Length = 407

 Score =  348 bits (893), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 95/395 (24%), Positives = 167/395 (42%), Gaps = 26/395 (6%)

Query: 24  PRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGD 83
                 L     +   +G D T   +H GH      L   Q  GH+ + ++G  T+ IGD
Sbjct: 31  EDLRRELLGTRPLRVKLGVDPTRPDIHLGHYVCFRKLREFQALGHQIVVIIGDWTARIGD 90

Query: 84  PSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLRE 143
           PS R   R+M+  +E++ N +     F   +        A +    TW       D++  
Sbjct: 91  PSGRSVQRQMLSEEEVRRNAQTYLDQFFKVVDVD----RAEIRWQSTWYNDFTLADVI-H 145

Query: 144 IGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQW 203
           + S ++V +ML+ E    R      ++  E  Y +LQAYD V +    +  +++GG+DQ 
Sbjct: 146 LTSKYTVAQMLAREDFAKRFNEGSPIAITELLYPLLQAYDSVAV----EADVEIGGTDQT 201

Query: 204 GNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYWR 262
            N++   D+   +       LT PLL    G  KM K+    I +N     P   +    
Sbjct: 202 FNLLVARDIQREMGQRPQNILTVPLLVGTDGVQKMSKSFDNYIAVN---DPPEEMFGKIM 258

Query: 263 NIDDADVVSFAKRLTTLPMSEIDRM---AKLQGKEINEAKKIIATEITTMVHGREEAEKA 319
           +I D+ +  + + LT +P SEI  M   A        + K+ +   I T +H  E+AE A
Sbjct: 259 SIPDSLLGDYYRLLTDVPESEITSMLDAAVRGEVNPRDLKERLGMIIVTDLHSAEDAEAA 318

Query: 320 ATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKI 379
             A    +      + MP +++ ++E      +L L++ AG A + NEARR +    +++
Sbjct: 319 REAFDRVYRRRELPEDMPEVAVPREE-----RILPLLITAGMARTNNEARRLVTQGGVRL 373

Query: 380 NNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
               + + +  + +          L  GK+  +  
Sbjct: 374 GGERVIDPEATVMI-----NAPTVLQVGKRRFVRL 403


>gi|223039857|ref|ZP_03610141.1| tyrosyl-tRNA synthetase [Campylobacter rectus RM3267]
 gi|222878866|gb|EEF13963.1| tyrosyl-tRNA synthetase [Campylobacter rectus RM3267]
          Length = 402

 Score =  348 bits (893), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 95/410 (23%), Positives = 170/410 (41%), Gaps = 33/410 (8%)

Query: 18  IHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPIS 72
           + +I +   +  L               G+D TA  LH GH   L  + +LQK G     
Sbjct: 16  VAEIIDEERVANLVKNYYEKGENFYVKAGFDPTAPDLHLGHTVVLQKMAFLQKHGAIVQF 75

Query: 73  LMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL 132
           L+G  T  IGDPS + ++R+ +  + +  N +  +      +     K    ++ N  WL
Sbjct: 76  LIGDFTGQIGDPSGKSQTRKKLDRETVMANAKTYEEQVFKILDPQKTK----LMFNSRWL 131

Query: 133 CSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYD 192
             +     + E+ S F+V RML  +    R K   S+S  EF Y +LQ YD V +     
Sbjct: 132 NELGAAG-IVELASTFAVARMLERDDFEKRYKSGASISISEFLYPLLQGYDSVAMK---- 186

Query: 193 CRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKE 250
           C ++MGG+DQ  N++ G  L        +   +  PLL    G  KM K+L   I + + 
Sbjct: 187 CDIEMGGTDQKFNLLMGRTLQRIYNVGKEQAVIMMPLLEGLDGVNKMSKSLGNYIGVTE- 245

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG---KEINEAKKIIATEIT 307
              P   +    ++ D  +  + + L+     +I  +              K+ +A EIT
Sbjct: 246 --GPNEMFAKILSVSDELMWRWYELLSEKSAEKIANLKSDVASGKAHPKAVKEALALEIT 303

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
           T  +G   A++A          ++    M    ++       + ++  +   G   S+++
Sbjct: 304 TRYNGEAAAKEAKAEFDRVHSQNLIPTEMEEFGLAA-----PVWIVHALTHCGLCASSSQ 358

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           ARR + +NA+ +N   I++E+L++ +      G   L  GK+      + 
Sbjct: 359 ARRDIAANAVSLNQEKIADEQLKLGV------GEYVLQVGKRKFAKLKVT 402


>gi|294055488|ref|YP_003549146.1| tyrosyl-tRNA synthetase [Coraliomargarita akajimensis DSM 45221]
 gi|293614821|gb|ADE54976.1| tyrosyl-tRNA synthetase [Coraliomargarita akajimensis DSM 45221]
          Length = 393

 Score =  348 bits (893), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 92/397 (23%), Positives = 162/397 (40%), Gaps = 22/397 (5%)

Query: 21  ISNPRELDILCS-QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTS 79
           I    EL+        +   +G D T   L  GHL     L   Q  GH+ I ++G  T+
Sbjct: 14  IIGEAELEDRMHGNRPLRVKLGVDPTRPDLTFGHLVVFNKLRQFQDLGHEAILIIGDFTT 73

Query: 80  IIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYID 139
           +IGDPS R  +R ++  ++I EN +         +     +    ++ N  W   + + D
Sbjct: 74  LIGDPSGRSSTRPVLTKEQIVENAQTYLDQAFKILD----EHKTTVVYNSEWFNEMGFED 129

Query: 140 LLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGG 199
            L+ +    +V RML  +    R      +S +EF Y ++Q YD + L  +    +++GG
Sbjct: 130 CLK-LARKMTVARMLERDDFAKRYANNAPISIIEFLYPLIQGYDSLILNAD----VEIGG 184

Query: 200 SDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFW 258
           +DQ  N++ G  L +     +   LT PLL    G  KM K+    I       SP + +
Sbjct: 185 TDQLFNMLVGRALQKDAGKQEQAVLTMPLLVGLDGVKKMSKSQDNYIAFT---DSPKDMF 241

Query: 259 QYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEK 318
               ++ D  + ++ + L  L   +ID   KL+     +AKK +A+ +    H  ++A+ 
Sbjct: 242 GKIMSVSDDTMWTYYRLLLELDEEKID---KLKAGHPMDAKKHLASSLVGQFHSMKDAKH 298

Query: 319 AATAAMECFDMSIHSQHMPTISISKDEV-SRGMGLLTLIVKAGFATSTNEARRHLKSNAI 377
                 + F  +     MPT S S     +    L+ L+  +    S    RR ++   +
Sbjct: 299 ELEQFEQVFSKNKIPDDMPTFSWSDLAGDAEAAKLVDLMGASELFESKGAIRRLIQQGGV 358

Query: 378 KINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           K++    S+   +         G      GK+     
Sbjct: 359 KVDGDKQSDPNSEFSR----PNGEQIFQAGKRVFFKV 391


>gi|297565391|ref|YP_003684363.1| tyrosyl-tRNA synthetase [Meiothermus silvanus DSM 9946]
 gi|296849840|gb|ADH62855.1| tyrosyl-tRNA synthetase [Meiothermus silvanus DSM 9946]
          Length = 447

 Score =  347 bits (892), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 95/449 (21%), Positives = 178/449 (39%), Gaps = 61/449 (13%)

Query: 14  ERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           E G +  I + + L+ L S   +T  +G D T   +H GH   L  +   Q+ GHK + +
Sbjct: 15  EAGSVEIIPHEKLLEKLSSGKKLTVKLGLDPTRPDIHIGHAVVLRKMRQFQELGHKVVII 74

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
           +G  T++IGDPS R  +R  +  +E + N +         +     +    +  N  WL 
Sbjct: 75  IGDFTAMIGDPSGRSATRPPLTLEETRANAKSYVEQVGKILITEDQER-FELRYNSEWLE 133

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDC 193
           ++ + ++++ + S  +V +ML  E  ++R  +   +S  EF Y   Q YD V +  +   
Sbjct: 134 NLNFKEVIK-LASQLTVAQMLEREDFKNRYTQGIPISIHEFLYPFAQGYDSVPIRAD--- 189

Query: 194 RLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTS 253
            ++MGG+DQ  N++ G ++       +  A   PLL    G KM K+    I + +E   
Sbjct: 190 -VEMGGTDQKFNLLVGREVQRAYGLEEQVAFIMPLLEGPDGRKMSKSYDNYIGITEE--- 245

Query: 254 PYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMV--- 310
           P   ++    + D  +  + +  T L   EI +   L+      A +++A  +       
Sbjct: 246 PAEIYRKLMKVGDDLLPKYLELCTDLTPQEIQQ--VLEKGGPVGAHRVLARLVAGSYALP 303

Query: 311 --------------------HGREEAEKA---------------------ATAAMECFDM 329
                                GR+   +A                     A         
Sbjct: 304 RIPARLDRELYEEMGYRLEAAGRDSETQAVLIVVAPLTGYSLNVSETVRQAEERYNEVAK 363

Query: 330 SIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEK 388
                 + T+ I+  E+  G +G+  L   +G   S  EA+R +++  ++I+  +I++  
Sbjct: 364 GGIPDDIRTVPITSSELQEGRIGVAKLFTLSGLTESNGEAKRMIQNRGLRIDGEVITDPN 423

Query: 389 LQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           +Q+ L          L  GK   +   L 
Sbjct: 424 MQVSL-----DKPRVLQRGKDKFVRVQLA 447


>gi|300087847|ref|YP_003758369.1| tyrosyl-tRNA synthetase [Dehalogenimonas lykanthroporepellens
           BL-DC-9]
 gi|299527580|gb|ADJ26048.1| tyrosyl-tRNA synthetase [Dehalogenimonas lykanthroporepellens
           BL-DC-9]
          Length = 408

 Score =  347 bits (892), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 91/408 (22%), Positives = 178/408 (43%), Gaps = 27/408 (6%)

Query: 15  RGFIHQISNPRELDILCSQGV-VTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           R  + +I + +EL  L S G  +    G+D ++  +H GH+  L  L   Q+ GH+ + +
Sbjct: 11  RRAVSEIISEKELRSLLSSGKKLRLKEGFDPSSPDIHLGHMVGLRKLRQFQEMGHQVVLI 70

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
           +G  T+ IGDP+    +R ++ +++++ N E     F   +     +          W  
Sbjct: 71  VGDWTAQIGDPTGASVTRPILTAEQVRANAETYLQQFFKVVDRARTEVRWQ----SEWFT 126

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDC 193
                D+++ + S F++ +ML+ +  + R    + ++  EF Y +LQAYD V +    + 
Sbjct: 127 GFTLADVIK-LTSRFTIAQMLARDDFKKRFDSNRPITITEFLYPLLQAYDSVMV----EA 181

Query: 194 RLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTA-SGTKMGKTLSGAIWLNKEMT 252
            ++ GG+DQ  N++ G +L   +  P      +P+LT    G KM K+L   I + +   
Sbjct: 182 DIEFGGNDQKFNLLVGRELQSMIGQPPQQVFMTPILTGTGGGRKMSKSLHNHIGVAEP-- 239

Query: 253 SPYNFWQYWRNIDDADVVSFAKRLTTLPMSE---IDRMAKLQGKEINEAKKIIATEITTM 309
            P   +    +I D  ++ + + LT +  +E   I    K       E KK +A EI   
Sbjct: 240 -PEVIFGKVMSIGDDLIMQYFELLTDITDNELDTIAEDLKAGQVNPMEYKKRLAREILLQ 298

Query: 310 VHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSR---GMGLLTLIVKAGFATSTN 366
           ++ +  A+KA                +P I I     +R    + L +++ ++G   S  
Sbjct: 299 LYPKSSADKAMAYFESVHQRHEVPDTIPEIRIDYSAFTRDGGDIDLTSILCQSGLTASRG 358

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           EA+R +    + I+ + ++ + L +            +  GK+     
Sbjct: 359 EAKRLIAQGGVSIDGNKVTTDTLSLSSGC-------VVKAGKRKFARL 399


>gi|254423652|ref|ZP_05037370.1| tyrosyl-tRNA synthetase [Synechococcus sp. PCC 7335]
 gi|196191141|gb|EDX86105.1| tyrosyl-tRNA synthetase [Synechococcus sp. PCC 7335]
          Length = 408

 Score =  347 bits (891), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 102/395 (25%), Positives = 174/395 (44%), Gaps = 23/395 (5%)

Query: 23  NPRELDILCSQ-GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSII 81
           +   ++ L      +   +G D T S +H GH T +  L   Q  GH  I L+G  T+ I
Sbjct: 32  DENFIERLTKSDRPLRVKLGIDPTGSEIHLGHSTLVRKLRAFQDAGHTAILLIGDFTARI 91

Query: 82  GDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLL 141
           GDP+ R E R+ +   +++ N E         + + T      +  N  WL  I    +L
Sbjct: 92  GDPTDRAEVRKQLSEADVKANAETYIDQIKPILDFETP-GRLEIRYNSEWLSDIDLGKML 150

Query: 142 REIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSD 201
            E+ S  ++ +ML+ E   +R ++   +   EF Y +LQ YD V L  +    +++GG+D
Sbjct: 151 -ELLSTMTLGQMLAKEGFANRYEKGTPVYLHEFLYPLLQGYDSVALQSD----IELGGTD 205

Query: 202 QWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQY 260
           Q  N+  G DL         F +  PLL    G  KM K+L   + L ++   P   +  
Sbjct: 206 QKFNVTVGRDLQRHFGLQPQFGMLLPLLMGTDGSQKMSKSLGNYVGLQED---PLTMYSK 262

Query: 261 WRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAA 320
              + DA +  +   LT LP+ ++            + +K++A  +T + HG+  A +A 
Sbjct: 263 LEKVPDALIDDYFTYLTDLPLDQLPE-------NPRDQQKLLAKTVTGIFHGKAAAAQAQ 315

Query: 321 TAAMEC-FDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKI 379
             A+      +  +  +P  S+SK  V     L  L+       S++EARRH+K  A+K+
Sbjct: 316 QDALTLMAGQTSAAASVPEFSLSK--VGFPAKLFYLLGATPLCESSSEARRHIKGGAVKM 373

Query: 380 NNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +   +S+  L  +  +        L  GKK  +  
Sbjct: 374 DGEKMSDPNLTFEQAEDLEGK--VLQIGKKKFVRL 406


>gi|254584550|ref|XP_002497843.1| ZYRO0F14784p [Zygosaccharomyces rouxii]
 gi|238940736|emb|CAR28910.1| ZYRO0F14784p [Zygosaccharomyces rouxii]
          Length = 458

 Score =  347 bits (891), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 132/441 (29%), Positives = 214/441 (48%), Gaps = 33/441 (7%)

Query: 7   DFLSILSERGFIHQISNPRE-LDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
             L  L  RG I Q++ P + L    SQG  +  Y G D TA SLH G++  LM+L    
Sbjct: 19  GLLEDLKLRGLIAQVAQPEQWLHEKLSQGHKIKLYCGADPTAKSLHLGNVVPLMILLNFY 78

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG------- 117
             GH   +L+GG T  +GDPS R   R+ M      +N+++I+  F+ F + G       
Sbjct: 79  VKGHDVFALVGGATGRVGDPSGRTTERQGMSDDSRLDNVDRIQQQFTRFFENGWKYYESR 138

Query: 118 ------TGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSF 171
                  G    + ++N  W   IK +D L + G    V  M S  S+ SR++ +  L F
Sbjct: 139 FPQISARGPGRLVKVDNYHWWKDIKLLDFLAQYGRHIRVQSMFSRSSIASRIEGKDGLGF 198

Query: 172 LEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL-----KTPKLFALTS 226
            EF Y +LQAYDF  L K +   LQ+GG+DQWGNI  GID  +R+            +T+
Sbjct: 199 NEFTYQVLQAYDFYHLYKTHGVSLQVGGNDQWGNITAGIDFIDRVVSSSSDKLSPGGITA 258

Query: 227 PLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID- 285
           PLL+T++G K GK+   AI+L+ ++ + Y+ +Q++ N  DADV  F K  T LP+  I  
Sbjct: 259 PLLSTSTGEKFGKSAGNAIFLDPQINTAYDIFQFFYNTKDADVCRFLKIFTLLPLETIST 318

Query: 286 -RMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISK- 343
                ++   + + ++ +A E+T ++ G    E+++  +   F   +   +M    + K 
Sbjct: 319 VVQDHMEQPHLRKGQRFLAKEVTDLLFGVGSGERSSKVSEVLF-GHVSEANMSADELIKL 377

Query: 344 -------DEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIIS-NEKLQIKLQD 395
                   +V RG  L+ +I +     S +EARR L   ++ +++S +   E +    Q 
Sbjct: 378 FSEAKILQKVPRGQSLVDIITQVAPC-SKSEARRKLSQGSVLLHSSKLKVTENIDQLGQF 436

Query: 396 FDSTGNIKLSFGKKNHIICHL 416
                 + L  GK+   +  +
Sbjct: 437 LIDDKVLILRIGKQKCHVIEI 457


>gi|75907148|ref|YP_321444.1| tyrosyl-tRNA synthetase [Anabaena variabilis ATCC 29413]
 gi|115305796|sp|Q3MEN7|SYY_ANAVT RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|75700873|gb|ABA20549.1| tyrosyl-tRNA synthetase [Anabaena variabilis ATCC 29413]
          Length = 398

 Score =  347 bits (891), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 91/398 (22%), Positives = 169/398 (42%), Gaps = 26/398 (6%)

Query: 22  SNPRELDILCS--QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTS 79
           S+   L+   +     +    G D T + +H GH   +  L   Q  GH  + ++G  T+
Sbjct: 24  SDIESLEKRLATTDRPLRVKYGIDPTGADIHLGHSIPMRKLRGFQDAGHTAVLIIGDFTA 83

Query: 80  IIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYID 139
            IGDP+ + E RR +  +++++N +         + + T      +  N  WL  +  + 
Sbjct: 84  RIGDPTGKSEMRRQLTEEDVKQNAQTYLDQVRPILDFDTP-GRLEVRYNSEWLSRLD-LG 141

Query: 140 LLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGG 199
            + E+ +  +V +ML+ E    R K+E  +   EF Y ++Q YD V +    +  +++GG
Sbjct: 142 KITELLATMTVGQMLAKEGFADRYKKENPIFLHEFLYPLMQGYDSVAI----EADVELGG 197

Query: 200 SDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFW 258
           +DQ  NI  G DL         F +  P+L    G  KM K+L   + L++    P   +
Sbjct: 198 TDQKFNIAVGRDLQRHFGQKPQFGVLLPILIGTDGVQKMSKSLGNYVSLSE---HPGQKY 254

Query: 259 QYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEK 318
           Q  + + D  +  + + LT LP+ ++            + + ++A EI    HG + A++
Sbjct: 255 QKLQGVPDQMLEQYFELLTDLPIDKL-------PANPRDRQMLLAWEIVKQYHGEQAAQE 307

Query: 319 AATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIK 378
           A  AA            +P  S++       + L  L+   G   ST E +R ++   ++
Sbjct: 308 AKEAAQS----GGKEGAVPEFSLAGV-PQFPVKLAYLLGATGLCKSTGEGKRKIQEGGVR 362

Query: 379 INNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           ++   IS+     +  D        L  GK   +   L
Sbjct: 363 LDGDRISDADTIFQQPDELQGR--VLQVGKNKFVRLVL 398


>gi|146416377|ref|XP_001484158.1| hypothetical protein PGUG_03540 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 604

 Score =  347 bits (890), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 125/471 (26%), Positives = 197/471 (41%), Gaps = 69/471 (14%)

Query: 4   FKSDFL----SILSERGFIHQISNPRE--LDILCSQGVVTAYIGYDLTASSLHAGHLTQL 57
           F+SD L      L  R  I   ++     L      G +  Y G D +A SLH G+L   
Sbjct: 137 FESDLLTSLVRHLQSRYLIEGSTHEELFHLSEPGKSGQLKLYCGADPSAKSLHIGNLLPF 196

Query: 58  MLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK-- 115
           M++   +  G+  + L+GG T  +GDPS R + R  + S E  +N+ +I+     F+   
Sbjct: 197 MVMLHFRLRGYDVVGLIGGATGAVGDPSGRSKERAQIESDERADNVARIELQIRQFLNNG 256

Query: 116 ----------YGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR 165
                     +      +++ NN  W  SI  +D L + G    V  ML+ +S++SRL  
Sbjct: 257 VEYARSRNYPFPGDVGKSVVRNNADWWKSIGMLDFLAKYGRHIRVTNMLARDSIQSRLSS 316

Query: 166 EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLG----------ER 215
           +  L F EF Y +LQAYDF EL K     LQ+GG+DQWGNI  GIDL           + 
Sbjct: 317 QGGLGFNEFTYQVLQAYDFWELYKTEGVNLQIGGNDQWGNITAGIDLISRLHKLEPQTKE 376

Query: 216 LKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKR 275
            K    + +T PLLTT SG K GK+   A++++  +TSPY  +QY+    D  V    K 
Sbjct: 377 RKDKNAYGITVPLLTTPSGEKFGKSAGNAVFIDPSITSPYQLYQYFIQTPDEIVGKLLKV 436

Query: 276 LTTLPMSEIDRM---AKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIH 332
            T LP+  +D        +      A++++A E+  +VHG    ++ A      F     
Sbjct: 437 FTLLPLHSVDEHILPDHEKDPGSRIAQRVLAREVVDLVHGVGVGDQMAYITSFLF----- 491

Query: 333 SQHMPTISISKDEVSRGMGLLTLIVKAGFA------------------------TSTNEA 368
               PT     D+      L+    ++G                           S  E 
Sbjct: 492 ----PTPDQPFDDEISAAKLIENFKRSGILVHLDSTQVKFNDLKMSTLLSKVMNKSKTET 547

Query: 369 RRHLKSNAIKINNSI--ISNEKLQI---KLQDFDSTGNIKLSFGKKNHIIC 414
           +  +K+  I +      + +    +   K         + +  GK+N+ + 
Sbjct: 548 KNLIKNGGIYLGLEREQLQDPDDVVLFDKENHLIDNKLLLVRSGKQNYYVV 598


>gi|110597950|ref|ZP_01386231.1| tyrosyl-tRNA synthetase [Chlorobium ferrooxidans DSM 13031]
 gi|110340399|gb|EAT58888.1| tyrosyl-tRNA synthetase [Chlorobium ferrooxidans DSM 13031]
          Length = 406

 Score =  347 bits (890), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 104/392 (26%), Positives = 177/392 (45%), Gaps = 26/392 (6%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSF 86
           L  L +   +   +G D +   LH GH   L  L   Q  GH+ I ++G  T++IGDPS 
Sbjct: 31  LHSLKTGVPLKVKLGADPSRPDLHLGHSVVLRKLREFQDLGHEAILIIGDFTAMIGDPSG 90

Query: 87  RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGS 146
           + ++R  + ++E +EN E      S  +          +  N  WL ++K+ D++R + S
Sbjct: 91  KSKTRPQLSAKEARENGESYFEQASKILDPDKT----TICYNSDWLGAMKFADIIR-LSS 145

Query: 147 FFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNI 206
            ++V RML  +    R +  + +S  EF Y + Q  D V L  +    +++GG+DQ  N+
Sbjct: 146 HYTVARMLERDDFERRYRSNEPISIHEFLYPLAQGMDSVHLKND----IELGGTDQKFNL 201

Query: 207 ICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNID 265
           + G DL      P    +T  LL  + G  KM K+L  AI  N     P   +    +I 
Sbjct: 202 LVGRDLQREYGIPPQVCITMELLVGSDGKEKMSKSLGNAICFN---DPPSEMYGKVLSIP 258

Query: 266 DADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKIIATEITTMVHGREEAEKAATA 322
           D  + ++ + L  +P +E    +   + +  +   AK+ +A EI    + R  A  A T 
Sbjct: 259 DPLIETWCRLL--VPQTERAATSAILEQRETDPRSAKRALAREIVASYYSRSAAADAETH 316

Query: 323 AMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNS 382
             + F       H+    +   E  + + L+ L+V  G A S +EARR ++ N+I ++  
Sbjct: 317 FDQLFVHKKAPDHI---ELFLFE-EQSLPLIDLLVTLGAAPSKSEARRMIQQNSILVDER 372

Query: 383 IISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            IS    +I L D +      +  GK+     
Sbjct: 373 KISEIHEKIDL-DIEPK---IIKAGKRRFFKV 400


>gi|213409600|ref|XP_002175570.1| tyrosyl-tRNA synthetase [Schizosaccharomyces japonicus yFS275]
 gi|212003617|gb|EEB09277.1| tyrosyl-tRNA synthetase [Schizosaccharomyces japonicus yFS275]
          Length = 444

 Score =  347 bits (890), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 127/449 (28%), Positives = 210/449 (46%), Gaps = 45/449 (10%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           MP F+      LS RG + Q +      +  S  +   Y G D TA+SLH G+L   M L
Sbjct: 1   MPVFQP-LWKQLSLRGLVAQTA-----RVQASTNITGVYTGVDPTANSLHLGNLVAFMPL 54

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFS--------- 111
           F     G    +L+G  T+ +GDP+ R ESR  +  +   EN   +    S         
Sbjct: 55  FHAYLNGFPSFALVGDATAQLGDPTGRTESRTRLSKRVFSENTSALVNQLSFLSQRVVSY 114

Query: 112 -SFIKYGTGKT----DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE 166
             +  Y T  T    +  ++ N +W   +  +D L +IGS   VN+ML+ +SV SRL+  
Sbjct: 115 ARYCDYSTTDTPDERNWHIVQNSSWYSGMGLLDFLNKIGSTARVNQMLARDSVSSRLRSP 174

Query: 167 QSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLG-ERLKTPKLFALT 225
             LSF EF Y +LQAYDF  LA + +  LQ+GG+DQWGN+  G+D    +L   K FALT
Sbjct: 175 TGLSFSEFTYQLLQAYDFYYLATHSNVNLQIGGNDQWGNVTAGVDFVHRKLGDNKAFALT 234

Query: 226 SPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID 285
           +PLLTT++G K GK+   A+W++K  T  Y  +Q++ ++ D  +    K+LT L +  I 
Sbjct: 235 TPLLTTSNGVKFGKSTGNAVWIDKTKTDAYALYQFFVSLPDKMIPILLKQLTFLSVERIG 294

Query: 286 RMAKLQGKEI--NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM---PTIS 340
            + +   ++       + +A+ +   +HG++  + A   +   +    ++Q     P   
Sbjct: 295 ELEQQHSRKPEDRLLHRALASHVVYFLHGKDAVDTAIKVSNILYASKRNAQGFYWPPEPD 354

Query: 341 ----------------ISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSII 384
                           +      + + +  L+ + G   S  EA   +++  + + N I+
Sbjct: 355 YGNHSLKDLLQKTSAFVKIPRAIQSLPVCRLLRECGLFNSRKEASDCIENGKVMLGNEIL 414

Query: 385 SNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            +  L     +F     + L FGKK + +
Sbjct: 415 KDSNLI---TNFPPESLVCLRFGKKAYAL 440


>gi|262340852|ref|YP_003283707.1| tyrosine-tRNA ligase [Blattabacterium sp. (Blattella germanica)
           str. Bge]
 gi|262272189|gb|ACY40097.1| tyrosine-tRNA ligase [Blattabacterium sp. (Blattella germanica)
           str. Bge]
          Length = 361

 Score =  347 bits (890), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 123/364 (33%), Positives = 201/364 (55%), Gaps = 22/364 (6%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
            + + +  LS RG I        ++    +  +T YIG+D T+ SLH G L  L++L   
Sbjct: 1   MQKNIIEELSWRGLIKNKVP--GIENQL-KKPITMYIGFDPTSDSLHLGSLLPLIILIHF 57

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           QK GHK + L+GG T  IGDPS ++ SR ++  + +Q+N E IK      +K  + +T+ 
Sbjct: 58  QKMGHKSLVLIGGATGFIGDPSGKENSRILLDKEILQKNTESIKNQILKLLKVHSEETE- 116

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAY 182
            +LNN  W+ ++ +++ +R+IG +F+VN M+S +SV+ R+  ++  +SF EF+Y ++Q Y
Sbjct: 117 -LLNNLDWIQNVSFLEFIRDIGKYFTVNHMISKDSVKKRINDKKNGISFTEFSYSLIQGY 175

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           DF+ L +  +C LQ+GGSDQWGNI  GI+L  +    K++  T PL+T  +G K GK+  
Sbjct: 176 DFLYLNQMRNCLLQIGGSDQWGNITTGIELIRKKTGKKVYGFTFPLITKPNGIKFGKSEK 235

Query: 243 -GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAK 299
              IWL+K  T+PY F+Q+W NI D ++  + K  T L   +ID++     K       +
Sbjct: 236 EENIWLDKSKTTPYKFYQFWINISDFEIEKYVKIYTFLSKEKIDQLIIQHKKNPSQRFLQ 295

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHS-------------QHMPTISISKDEV 346
           K +A E+T  VHG   +E+        F     +              H+P + +S +E 
Sbjct: 296 KKLAYEMTKWVHGNLISEEIMKITNVLFHNKNETLQLLNEETLISIYNHIPHMILSFEEF 355

Query: 347 SRGM 350
            +G+
Sbjct: 356 QKGI 359


>gi|225390125|ref|ZP_03759849.1| hypothetical protein CLOSTASPAR_03875 [Clostridium asparagiforme
           DSM 15981]
 gi|225043817|gb|EEG54063.1| hypothetical protein CLOSTASPAR_03875 [Clostridium asparagiforme
           DSM 15981]
          Length = 413

 Score =  346 bits (889), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 98/406 (24%), Positives = 179/406 (44%), Gaps = 26/406 (6%)

Query: 18  IHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPIS 72
           + + +   E+     +       +   +G D +A  +H GH   L  +  LQ  GHK + 
Sbjct: 24  VAEHTAVSEIRAKLQKAADEDRPLIVKLGLDPSAPDIHLGHSVVLRKIRQLQDLGHKAVI 83

Query: 73  LMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL 132
           ++G  T  IGDP+ + ++R+ +  +E+  N +  +      I     K    +  N  W 
Sbjct: 84  IIGDYTGRIGDPTGKSKTRKQLTEEEVLINAQTYQNQIFKIID----KNKTEVRYNSEWF 139

Query: 133 CSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYD 192
             + + D+L  + S  +V RML  +    R      LS  EF Y ++QAYD V +  +  
Sbjct: 140 EKMNFSDIL-TLASKCTVARMLERDDFHKRYTNHLPLSIHEFFYPLMQAYDSVAIKAD-- 196

Query: 193 CRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEM 251
             +++GG+DQ  NI+ G  + +         L  PLL    G  KM K+L   I +++  
Sbjct: 197 --IELGGTDQTFNILMGRYIQKDYGLESQLTLFMPLLEGIDGIEKMSKSLGNYIGIDE-- 252

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATEITTM 309
            +P+  ++    I D  ++ +    T +   E+  +AK   +G+   + K  +A EIT +
Sbjct: 253 -APHTIYEKVMKIPDNMIIKYYNLCTDIHPDEVGEIAKRLEEGENPRDIKMELAYEITKL 311

Query: 310 VHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEAR 369
             G + A  A    ++ F   +  + +  + I  ++    M +L  +++ G   S +E R
Sbjct: 312 YCGEDGAAAARRRFIDVFQRDLIPEDIEILHIGNEDNLEEM-ILAALLETGKFKSKSEIR 370

Query: 370 RHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           R  K   +K N   +     +IK  + ++ GNI L  GKK+     
Sbjct: 371 RLAKQGGVKWNGDRV----AEIKDINLNAGGNI-LRIGKKHIFKIE 411


>gi|257460766|ref|ZP_05625867.1| tyrosyl-tRNA synthetase [Campylobacter gracilis RM3268]
 gi|257442097|gb|EEV17239.1| tyrosyl-tRNA synthetase [Campylobacter gracilis RM3268]
          Length = 401

 Score =  346 bits (889), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 111/422 (26%), Positives = 185/422 (43%), Gaps = 35/422 (8%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVV-TAYIGYDLTASSLHAGHLTQLML 59
           M  FK     I+ E     QI     +      G V    +G D TA+ LH GH   L  
Sbjct: 8   MENFKRGVAEIIGE----EQI--EALIRRYYDSGEVFYVKVGMDPTAADLHLGHAVVLNK 61

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG 119
           L +LQ  G     L+G  T+ IGDP+ + E+R+ +  + + +N +  +      +     
Sbjct: 62  LAFLQNHGAIVQFLIGDFTAQIGDPTGKSETRKKLAREIVLQNAKTYEQQVFKILNPAKT 121

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
           K    ++ N  W   +    ++ E+ S F+V RML  +    R K EQ +S  EF Y +L
Sbjct: 122 K----VMFNSEWTNRLGASGMI-ELSSTFNVARMLERDDFEKRYKAEQPISISEFMYPLL 176

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASGT-KM 237
           Q YD V +     C ++ GG+DQ  N++ G  L        +   +  PLL    GT KM
Sbjct: 177 QGYDSVCMK----CDIEFGGTDQKFNLLMGRQLQRIYDIGKEQSVVMMPLLVGTDGTNKM 232

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---E 294
            K+L   I +     +P++ +    +I DA +  +   L+     +I+ +          
Sbjct: 233 SKSLGNYIGVT---DTPHDMYGKVMSISDALMWDWYNLLSQKSSEDIELIKGFVADGSIH 289

Query: 295 INEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLT 354
               K+ +A+EI T  +    A +A       FD    +  +P+  I +  VS    ++ 
Sbjct: 290 PKAVKEELASEIVTQFYDENTAFEAKQE----FDRVHGAGELPS-EIKEYHVSSPAWIVK 344

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            ++    A S+++ARR +KSNA+ I+ + I +E+LQ+       +G   L  GKK     
Sbjct: 345 ALISCKLAVSSSDARRLIKSNAVSIDQNKILDEQLQLS------SGEYTLQVGKKKFAKL 398

Query: 415 HL 416
            +
Sbjct: 399 KV 400


>gi|108762063|ref|YP_631185.1| tyrosyl-tRNA synthetase [Myxococcus xanthus DK 1622]
 gi|108465943|gb|ABF91128.1| tyrosyl-tRNA synthetase [Myxococcus xanthus DK 1622]
          Length = 420

 Score =  346 bits (889), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 92/411 (22%), Positives = 170/411 (41%), Gaps = 37/411 (9%)

Query: 24  PRELDILC-----SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGT 78
           P +L         +   +    G+D +   LH GH   L  +   Q+ GH  + L+G  T
Sbjct: 28  PEDLKKKLQYSYDTGKPLVIKAGFDPSRPDLHLGHSLLLTRMRRFQEFGHTVVFLIGDFT 87

Query: 79  SIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYI 138
            +IGDP+ R+ +R  +   E++ N E  K      +     ++   +  N +WL S+   
Sbjct: 88  GLIGDPTGRNATRPALTRDEVKANAETYKKQVFKVLD----ESKTQVRFNSSWLDSLGTE 143

Query: 139 DLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMG 198
            ++R + S +SV RML  +  + R + E S+S  EF Y +LQ YD V L  +    +++G
Sbjct: 144 GMIR-LASRYSVQRMLERDDFKKRFRGEVSISIHEFLYPLLQGYDSVVLKAD----VELG 198

Query: 199 GSDQWGNIICGIDLGERLKTPKLFALTSPLLTTAS---------GTKMGKTLSGAIWLNK 249
            +DQ  N++ G  L +         +T P+L   +         G KM K+L   + +++
Sbjct: 199 ATDQLFNLLVGRQLMKEEGMAPQVIMTGPILEGLNAKAVDGKIVGDKMSKSLDNYVGIDE 258

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAKKIIATEI 306
              +    +    +I D  +  + + L+    +E+  M              K   A E+
Sbjct: 259 PADT---IFGKLMSITDDLMWRYYELLSAKTRAELAEMRAQVESGALHPKAVKVGFAQEM 315

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHS-QHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           T    G E  +KAA    + F     S   +P + +S     + + +  L+ ++    S 
Sbjct: 316 TARFQGEEAGKKAAEDFEKRFAKKELSTDELPLVEVSLGGAEK-LPVTKLLPESKLVASA 374

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            EAR+ +    +++N   + + K ++        G   +  GK       L
Sbjct: 375 TEARKLMAQGGVRVNGEKVQDVKAEL------GAGEYTVQVGKLKAARVKL 419


>gi|47459382|ref|YP_016244.1| tyrosyl-tRNA synthetase [Mycoplasma mobile 163K]
 gi|81614119|sp|Q6KH97|SYY_MYCMO RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|47458712|gb|AAT28033.1| tyrosyl-tRNA synthetase [Mycoplasma mobile 163K]
          Length = 415

 Score =  346 bits (889), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 114/406 (28%), Positives = 201/406 (49%), Gaps = 21/406 (5%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           + FL  L E+  I  ISN  +++    +  +  Y+G+D +A S+H G+   + +L   +K
Sbjct: 2   NSFLKELQEKNLIQDISNIEKIENSL-KNKMGIYVGFDPSAKSIHLGNFVVINVLLIAKK 60

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
                ++L+GG T  IGDPS +   R ++    +++N E IK     F+       DA +
Sbjct: 61  HRIPTVALIGGATGGIGDPSGKKSERILIDEDTLKKNTEAIKKQIKHFL------PDAKI 114

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +NN  +  +  +ID LR++G F  V+ MLS E V++RL+    +SF EF Y ++QA DF 
Sbjct: 115 VNNSDFYKNQSFIDFLRDVGKFIQVSYMLSKEIVKNRLES--GISFTEFAYSLIQANDFH 172

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLF--ALTSPLLTTASGTKMGKTLSG 243
            L KN++  +Q GGSDQWGNI  G++L  +      F    T  LL  + GTK GK+  G
Sbjct: 173 YLFKNHNVGIQFGGSDQWGNITTGLELIRKRNGENSFSGGFTIKLLLKSDGTKFGKSEQG 232

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKKI 301
           AI+L+  +TSPY  +Q+  N +D+D+++    ++ L + EI  +        E    +K+
Sbjct: 233 AIYLDPSLTSPYTMYQFLLNQNDSDLLNLFNFISDLGIKEILEIITKHSENPEKRYGQKM 292

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQH--------MPTISISKDEVSRGMGLL 353
           +A  I   +HG+    +    +   F     +          + +  ++    S    ++
Sbjct: 293 LANNIVNRIHGKNALNEVENISNILFKNGKINDLSKSEVSIIINSFEVNHVNFSNDEKII 352

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDST 399
            ++ +A    S NE R+ ++   + +   II++    +K  +    
Sbjct: 353 DILDRAKIFKSKNEIRKLIEQKGLVVGAEIITDFDQILKDSNLTHG 398


>gi|319761433|ref|YP_004125370.1| tyrosyl-tRNA synthetase [Alicycliphilus denitrificans BC]
 gi|330823297|ref|YP_004386600.1| tyrosyl-tRNA synthetase [Alicycliphilus denitrificans K601]
 gi|317115994|gb|ADU98482.1| tyrosyl-tRNA synthetase [Alicycliphilus denitrificans BC]
 gi|329308669|gb|AEB83084.1| tyrosyl-tRNA synthetase [Alicycliphilus denitrificans K601]
          Length = 410

 Score =  346 bits (889), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 98/392 (25%), Positives = 176/392 (44%), Gaps = 26/392 (6%)

Query: 28  DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFR 87
               +   +   +G D TA  +H GH   L  +  LQ  GH+ I L+G  T++IGDPS R
Sbjct: 41  RSQATGQPLRIKLGLDPTAPDIHLGHTVVLNKMRQLQDLGHQVIFLIGDFTTLIGDPSGR 100

Query: 88  DESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSF 147
           + +R  + +++I+ N E      +  +     +    +  N  W  ++    ++ E+ + 
Sbjct: 101 NSTRPPLTAEQIKVNAETYYTQAAKVLDPARTE----IRYNSEWSDALGARGMI-ELSAK 155

Query: 148 FSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNII 207
           ++V RM+       R     S+S  EF Y +LQ YD V L  +    L++GG+DQ  N++
Sbjct: 156 YTVARMMERNDFHQRFTDGSSISLHEFLYPLLQGYDSVALRSD----LELGGTDQKFNLL 211

Query: 208 CGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDD 266
            G  L +         LT PLL    G  KM K+ +  I + ++  +    +    +I D
Sbjct: 212 MGRHLQQEYGQEPQCVLTMPLLVGLDGVDKMSKSKNNYIGITEDANT---MFAKVLSISD 268

Query: 267 ADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAATAAM 324
           A +  +   L+   ++EI  + K    G+   +AK ++A EIT   H    A+ A     
Sbjct: 269 ALMWDWYTLLSFKSLAEIAALKKEVEAGRNPKDAKVMLAKEITARFHSAAAADAAEQDFN 328

Query: 325 ECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSII 384
                      +P +S+S       +G+  L+ +AG A ST+EA R +    ++++  ++
Sbjct: 329 NR-SKGGIPDEIPELSLS----GAPLGIGALLKQAGLAPSTSEANRLIDGGGVRVDGGVV 383

Query: 385 SNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           S++ L++        G   +  GK+      L
Sbjct: 384 SDKGLRL------GAGTYVVQVGKRKFARVAL 409


>gi|255936395|ref|XP_002559224.1| Pc13g07980 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211583844|emb|CAP91867.1| Pc13g07980 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 611

 Score =  345 bits (885), Expect = 8e-93,   Method: Composition-based stats.
 Identities = 122/500 (24%), Positives = 217/500 (43%), Gaps = 86/500 (17%)

Query: 2   PAFKSDFLSILSERGFIHQISNPREL-DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
              + +F   L ERG IH +   REL   + ++     Y+G D TA S+H GH+   ++L
Sbjct: 85  SGNRKNFAQHLEERGLIHDVVGERELLHKVFTEKRAGLYVGIDPTAPSMHVGHMLPFLVL 144

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSF------- 113
            W    G     L+GG TS +GDP+ R + R  + S   + N+  +              
Sbjct: 145 AWAYVWGLPVTFLLGGATSRVGDPTGRLKGRDAVHSSIRKANMASMHMQLKKLGSSIEQY 204

Query: 114 -IKYGTGKTDAL---MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSL 169
             ++G  +       + NN TW  S+ ++++LR++G+F  +  ML  ++V++RL +   +
Sbjct: 205 GRRHGHERKPMWKRALTNNNTWWNSMPFLEVLRDLGAFMRLGPMLGRDTVKTRLNQGDGM 264

Query: 170 SFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGID----LGERLKTPKL---- 221
           SF EF+Y ILQA+D+  L +    ++Q+GG+DQ+GNI+ G++    +       ++    
Sbjct: 265 SFAEFSYPILQAWDWWTLFQK-GTQIQVGGADQYGNILFGMEAVKSISRNTADEQVRNPL 323

Query: 222 -------FALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAK 274
                     T+PLLTT SG K+GK+   A+WL+K++TS +  +QY+    D  V  + K
Sbjct: 324 ESELDRPIGFTTPLLTTPSGEKLGKSAGNAVWLDKDLTSTFELYQYFVRTPDDVVERYLK 383

Query: 275 RLTTLPMSEIDRMAKLQGKEI--NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIH 332
             T +P+ EI  + + Q K+     A+  +A E   ++HG+ EA+  A    + F     
Sbjct: 384 LFTFIPLPEIATIMEEQNKDPSKRVAQHKLAVEFVELIHGKAEADAVALQHRQLFRPRSS 443

Query: 333 SQH--------MPTISISKD--------------------------EVSRGMGLL----- 353
           +           P+ S  +                           +V+    L+     
Sbjct: 444 TAEPTPLRKPSAPSASHPQSPTAGFETPQSGNPYAAQTNWANMGDIKVTLPESLVFNQPF 503

Query: 354 -TLIVKAGFATSTNEARRHLKSNAIKINNSIISNE---------------KLQIKLQDFD 397
             ++  AG  +S +E  R + +N  K+  S   +                  +   +   
Sbjct: 504 NKILWSAGLVSSKSEGHRVIVNNGAKV-GSRPGDSGPMWDQLSFTPIRPWDAEKTKEFVL 562

Query: 398 STGNIKLSFGKKNHIICHLC 417
           +   + L  GK      H+ 
Sbjct: 563 NGNLLMLKLGKWKLKAVHIV 582


>gi|315638888|ref|ZP_07894060.1| tyrosine--tRNA ligase [Campylobacter upsaliensis JV21]
 gi|315481106|gb|EFU71738.1| tyrosine--tRNA ligase [Campylobacter upsaliensis JV21]
          Length = 402

 Score =  345 bits (885), Expect = 8e-93,   Method: Composition-based stats.
 Identities = 105/422 (24%), Positives = 182/422 (43%), Gaps = 35/422 (8%)

Query: 7   DFLSILSE--RGFIHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLML 59
           D   IL+E  RG   +I +   ++ L               G+D TA  LH GH   L  
Sbjct: 2   DIKEILAEVKRGC-AEIIDEARIEDLIKNYYEKGENFYVKAGFDPTAPDLHLGHSVVLSK 60

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG 119
           + +LQK G +   L+G  T  IGDPS ++ +R+ +  +E+ +N +  +      +     
Sbjct: 61  MAFLQKHGARVQFLIGDFTGQIGDPSGKNATRKKLSQEEVLKNAKTYESQVFKILD---- 116

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
           K    ++ N  WL  +     + E+ S FSV RML  E    R + + S+S  EF Y +L
Sbjct: 117 KNKTDIVFNSKWLNELGAAG-IVELTSTFSVARMLEREDFTKRFREQSSISICEFLYPLL 175

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASGT-KM 237
           Q YD V L  +    ++MGG+DQ  N++ G  L        +   +  PLL    G  KM
Sbjct: 176 QGYDSVALKSD----IEMGGTDQKFNLLMGRTLQRIYDVKKEQAIIMMPLLEGLDGVNKM 231

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID---RMAKLQGKE 294
            K+L+  I + +      + +    +I D  +  + + L+   + EI+      +     
Sbjct: 232 SKSLNNYIGVTENAK---DIYAKILSISDELMFRYYELLSKKSLKEIETIKENIQNGSLH 288

Query: 295 INEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLT 354
               K+ +A E+    H +E A +A          +     +    +S       + L  
Sbjct: 289 PKIVKENLALELVERFHSKELANEAKAEFDRVHSANALPSEIAEFELS----GGSVWLAK 344

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +V+ G   ST+ ARR + +N++ +N+  I +E++Q++L      G   L  GK+     
Sbjct: 345 ALVECGLENSTSAARRAIVANSVSVNSQKIKDEQMQLEL------GEYILQIGKRKFARL 398

Query: 415 HL 416
            +
Sbjct: 399 KV 400


>gi|319653466|ref|ZP_08007566.1| tyrosyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2]
 gi|317394950|gb|EFV75688.1| tyrosyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2]
          Length = 418

 Score =  344 bits (884), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 96/412 (23%), Positives = 170/412 (41%), Gaps = 29/412 (7%)

Query: 15  RGFIHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
           R  +  I    EL    ++       +   +G D +A  +H GH   L  L   Q  GH 
Sbjct: 24  RNGVQDILPEAELKNKIAKSIFQNQPLKIKLGLDPSAPDVHIGHTVVLNKLKQFQDNGHI 83

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
              ++G  T  IGDP+ +  +R  +  +E++ N +     F   +          +  N 
Sbjct: 84  IQLIIGDFTGKIGDPTGKSAARNQLTDEEVKRNAKTYFEQFCKVLD----MNKVDLHYNS 139

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
            WL  ++  D++R + +  +V R+L       RL   + +S  EF Y ++Q YD V L  
Sbjct: 140 AWLSDLQLEDVIR-LSASITVARLLERNDFSERLSTGKPISLHEFFYPLMQGYDSVVLES 198

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLN 248
           +    +++GG+DQ  N++ G  L E  +  K   +  PLL    G  KM K+ +  I ++
Sbjct: 199 D----IELGGNDQHFNVLMGRHLQEHFQKEKQVVILMPLLEGLDGKEKMSKSKNNYIGVD 254

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSE---IDRMAKLQGKEINEAKKIIATE 305
           ++   P N +    +I D  +  +    T LP+ E   I    +       +AK ++   
Sbjct: 255 ED---PNNMYGKTMSIPDELIPKYFNLATDLPVKEKQQIAEGLENGTLHPRDAKMLLGKT 311

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           I  M HG  EA+KA       F        +P            + +  L+   G  +S 
Sbjct: 312 IVRMYHGTGEADKAELHFKTIFQKGAIPDEIPEAEWKG---EGEVLITDLLAGLGLLSSK 368

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            EAR+ +    I++N   + + ++ +K+ D      + L  GK+  +   L 
Sbjct: 369 TEARKMIAGGGIRLNGQKVGDVQMLVKITD-----GLVLQAGKRKFVKLRLS 415


>gi|153956124|ref|YP_001396889.1| tyrosyl-tRNA synthetase [Clostridium kluyveri DSM 555]
 gi|146348982|gb|EDK35518.1| TyrS2 [Clostridium kluyveri DSM 555]
          Length = 402

 Score =  344 bits (884), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 93/404 (23%), Positives = 176/404 (43%), Gaps = 29/404 (7%)

Query: 23  NPRELDILC-----SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGG 77
           +  EL         +   +   +G D +A  +H GH   L  +  +Q  GH+ + ++G  
Sbjct: 20  DEDELRNKLTEFIQNNRPLIIKLGLDPSAPDIHLGHAVVLRKIKQMQDLGHEAVIIIGDF 79

Query: 78  TSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKY 137
           T  IGDPS + + R  +  ++++EN           +     K    +  N  WL  + +
Sbjct: 80  TGKIGDPSGKSKGRNALTDEQVRENARTYFEQIFKVLD----KKKTTVRYNSEWLSKLNF 135

Query: 138 IDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQM 197
            D+LR + +  +V RM+  +  ++R      +   EF Y ++QAYD +EL  +    +++
Sbjct: 136 EDVLR-LAATTTVARMMERDDFQNRFTNNIPIGIHEFFYPLMQAYDSIELNAD----IEL 190

Query: 198 GGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYN 256
           GG+DQ  NI+ G  L + +   +  A+  PLL    G  KM K+L   I + +       
Sbjct: 191 GGTDQTFNILMGRTLQKTMGQSQQVAMFMPLLEGLDGVEKMSKSLENYIGVYESAKV--- 247

Query: 257 FWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEITTMVHGRE 314
            ++    + D  ++ + +  T      I+  R   +QGK   + K  +A  IT++ H  +
Sbjct: 248 MFKKVMEVPDELILKYFELATDEHPDRIEAIRQELVQGKNPRDIKYALAEIITSLYHTEQ 307

Query: 315 EAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKS 374
           E  +A     + F        +P +++     S  + ++ L+V+ GF  S +E RR ++ 
Sbjct: 308 EVIEAKEYYDKAFIKKAIPDQIPELAVKAQ--SHLVEIIPLLVENGFIKSNSEFRRLVQQ 365

Query: 375 NAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLCG 418
           N +++N   + +    +   D        L  GKK  +     G
Sbjct: 366 NGVQLNQHKLKHIDSILLYGD-------VLKIGKKRFVKIIWEG 402


>gi|194335972|ref|YP_002017766.1| tyrosyl-tRNA synthetase [Pelodictyon phaeoclathratiforme BU-1]
 gi|194308449|gb|ACF43149.1| tyrosyl-tRNA synthetase [Pelodictyon phaeoclathratiforme BU-1]
          Length = 405

 Score =  344 bits (884), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 93/393 (23%), Positives = 168/393 (42%), Gaps = 22/393 (5%)

Query: 24  PRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIG 82
            ++L      G  +   +G D +   LH GH   L  L   Q  GH+ I ++G  T++IG
Sbjct: 27  EQKLRQSLKCGLPLKIKLGADPSRPDLHLGHSVVLRKLREFQDFGHEAILIIGDFTAMIG 86

Query: 83  DPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLR 142
           DPS + ++R  + ++E +EN        S  +          +  N  WL  + + D+++
Sbjct: 87  DPSGKSKTRPQLSAEEARENGLSYFEQASKILD----PEKTTICYNADWLGKMSFADVIK 142

Query: 143 EIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQ 202
            + S ++V RML  +    R + ++ +S  EF Y + Q  D V L  +    +++GG+DQ
Sbjct: 143 -LSSHYTVARMLERDDFERRYRAQEPISIHEFLYPLAQGMDSVHLKND----VELGGTDQ 197

Query: 203 WGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYW 261
             N++ G  L           +T PLL    G  KM K+L  AI  N    SP + +   
Sbjct: 198 KFNLLVGRALQREYGIEPQVCITMPLLVGTDGKEKMSKSLGNAICFN---DSPSDIYGKV 254

Query: 262 RNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAAT 321
            +I D  + ++ K L       +  +     +    AK+ +A  I  +   ++EA+ A +
Sbjct: 255 LSIPDTLIETYCKLLVPKEDEGVGAILDEITENPRTAKRALAKTIAALYSSQKEADDAES 314

Query: 322 AAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINN 381
              + F       H+      +      + L+ L+V  G ATS ++ARR ++  ++ ++ 
Sbjct: 315 QFDQLFIHKKAPDHIELFEFDES----SISLIDLLVTLGAATSKSDARRMIQQKSVLVDE 370

Query: 382 SIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
             I      I+L          +  GK+     
Sbjct: 371 RKIEEIAECIELSLEAK----IIRAGKRRFFKV 399


>gi|321309531|ref|YP_004191860.1| tyrosyl-tRNA synthetase [Mycoplasma haemofelis str. Langford 1]
 gi|319801375|emb|CBY92021.1| tyrosyl-tRNA synthetase [Mycoplasma haemofelis str. Langford 1]
          Length = 412

 Score =  344 bits (884), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 124/415 (29%), Positives = 214/415 (51%), Gaps = 19/415 (4%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
            FL  L +RG +  I++  +            Y+G D TA SLH G+   L LL    + 
Sbjct: 6   GFLRELKDRGLVDNITDEGKFVSALESKR-GVYLGIDPTAPSLHLGNYLGLTLLRRFIQR 64

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHK + ++GG T+ +GDPSFR + R+ M  ++I+ N E+I+      +       +A ++
Sbjct: 65  GHKVVVILGGMTASVGDPSFRSKERKKMSLEDIELNKERIRDEVKRVL------PEANIV 118

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           +N ++   ++  D +RE+ S  +++ +LS E ++ RL R   L+  EF Y + Q++DF E
Sbjct: 119 DNLSFYSDLQISDFIREMCSQVNISTLLSKEFLKDRLSR--GLTLAEFVYPLFQSWDFYE 176

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSGA 244
           L K  D R+Q+GGSDQWGNI  GIDL ++  +P  +   LT PLL  +SG K GK+ + A
Sbjct: 177 LYKGKDIRVQLGGSDQWGNITSGIDLIKKTVSPDHEAVGLTFPLLLDSSGKKFGKSENNA 236

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           ++L++ +TSPY  +QY  N+DD  +  + ++LT + +SEI+ +  +        K  +  
Sbjct: 237 LFLDQNLTSPYVVFQYLINLDDKLIPDYLRKLTFINLSEIESL--VSTSSPQNLKFTLIW 294

Query: 305 EITTMVHGREEAEKAATAAMECFDMS---IHSQHMPTIS--ISKDEVSRGMGLLTLIVKA 359
           EI   ++  +  EK    +   F      + S  +  +   I        + L   +   
Sbjct: 295 EIFKHIYDHDTFEKIKRVSGVLFGKGSEDLKSGDLLLVEGSIPTVYYKESVNLSIALKDL 354

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           GF++S +E +R + SN+I + N  +++    +        G + L  GKK+  + 
Sbjct: 355 GFSSSNSETKRLVSSNSIFLFNKCLTDWNTTLDES-ISKDGYLILRKGKKSFGLV 408


>gi|115378697|ref|ZP_01465845.1| tyrosyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
 gi|310822372|ref|YP_003954730.1| tyrosyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
 gi|115364283|gb|EAU63370.1| tyrosyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
 gi|309395444|gb|ADO72903.1| Tyrosyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
          Length = 420

 Score =  344 bits (883), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 87/411 (21%), Positives = 169/411 (41%), Gaps = 37/411 (9%)

Query: 25  RELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTS 79
            EL     +       +    G+D     LH GH   L  +   Q  GH  + L+G  T+
Sbjct: 29  EELKKKLERSYREGKPLIIKAGFDPNRPDLHLGHSLLLTRMRRFQDFGHTVVFLIGDFTA 88

Query: 80  IIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYID 139
           +IGDP+ ++ +R  +  +E++ N E  K      +         ++  N  WL ++    
Sbjct: 89  LIGDPTGKNVTRPPLSREEVKANAETYKQQVFKVL----HAERTVVRFNSEWLDALGTEG 144

Query: 140 LLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGG 199
           ++R + + +SV RML  +  + R +  +S++  EF Y +LQ YD V L  +    +++G 
Sbjct: 145 MIR-LAARYSVQRMLERDDFKKRFRDNRSIALHEFLYPLLQGYDSVALKAD----VELGA 199

Query: 200 SDQWGNIICGIDLGERLKTPKLFALTSPLLTTAS---------GTKMGKTLSGAIWLNKE 250
           +DQ  N++ G  L +         +T P+L             G KM K+L   + +N+ 
Sbjct: 200 TDQLFNLLVGRQLMKEQGMEPQVIMTGPILEGLDAKLVDGKITGEKMSKSLDNYVGINEP 259

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA---KLQGKEINEAKKIIATEIT 307
                  +    +I D  +  + + L+  P+ EI  +    +        AK   A EI 
Sbjct: 260 A---EQIFGKLMSITDDLMWRYYELLSARPLKEIQALKASVESGQSHPKAAKVAFAQEIA 316

Query: 308 TMVHGREEAEKAATAAMECF-DMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
           +   G E   +AA      F +  + ++ +P + +   E +  + +  ++ +     S+ 
Sbjct: 317 SRFQGDEAGRRAAEDFEARFKNKQLDTESLPLVEVPM-EGAAKLLVTKVLPETKLVASST 375

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           EAR+ +    ++I    +++ K ++        G   +  GK       L 
Sbjct: 376 EARKLMAQGGVRIAGEKVTDPKAELGP------GEYLVQVGKLKAARVKLT 420


>gi|46107722|ref|XP_380920.1| hypothetical protein FG00744.1 [Gibberella zeae PH-1]
          Length = 611

 Score =  344 bits (883), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 122/465 (26%), Positives = 204/465 (43%), Gaps = 57/465 (12%)

Query: 9   LSILSERGFIHQISN-PRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
             IL ERG+I  ++  P ++  +     + +Y+G D TA S+H GHL  +M +FW+   G
Sbjct: 64  WDILQERGYIKDVAGTPDKIKEIMRVKRIGSYVGIDPTADSMHVGHLLPMMPMFWMWFHG 123

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFI--------KYGTG 119
           +  ++L+GG T+ IGDP+ R ESR+++ + +I +NI KI    +           KYG  
Sbjct: 124 YPAVTLIGGSTARIGDPTDRLESRQILSNADISKNITKIHLQLTRIWSNVHVLKEKYGYP 183

Query: 120 KTDA---LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNY 176
              A    +LNN  WL ++   D  + I     +  ML+ ++V+ ++     +S  EF Y
Sbjct: 184 NDWAATHRLLNNNMWLGNLTLYDFAKRIARHTRIGPMLAKDTVKRKMTEGDGMSLGEFMY 243

Query: 177 MILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK--------------TPKLF 222
            +LQ +DF  +      ++Q+GGSDQ+GNI  GID  + ++                +  
Sbjct: 244 PLLQGWDFWHMYNKLGIQMQIGGSDQYGNITAGIDALKTIRETEEAPHLKKPSTWDHEPV 303

Query: 223 ALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMS 282
             T PLLT ASG K GK+   A+WL++  T+ ++ + Y+    D +V    K  T +PM 
Sbjct: 304 GFTVPLLTDASGAKFGKSAGNAVWLDEFKTTAFDLYGYFVRRSDDEVEKLLKMFTFMPME 363

Query: 283 EIDRMAKLQGKEI--NEAKKIIATEITTMVHGREEAEKAATAAMECFD---MSIHSQHMP 337
            I  + +         +A+  +A ++ ++VHG E A K A      F      I  +  P
Sbjct: 364 TISTLMEQHRANPQERKAQHALAFDVVSLVHGSERAVKEAQQHEFRFGSRLSGIAKEPSP 423

Query: 338 TISI------SKDEVSRGMGLLTL-----IVKAGFATSTNEARRHLKSNAIKINNSIISN 386
              I       + ++     ++ L     +   G A+S++E  R L      I       
Sbjct: 424 DSGIITPNNAPRSDIKLPRSIMDLSPAKILHACGLASSSSEGNRLLSQQGAYIAAQPGQK 483

Query: 387 EKLQI---------------KLQDFDSTGNIKLSFGKKNHIICHL 416
             L                   +       + +  GK N  I  L
Sbjct: 484 RGLVPGNLSWTPMKAWFPEETAKFLIDERMLIMRKGKHNVRIVEL 528


>gi|295657588|ref|XP_002789361.1| tyrosyl-tRNA synthetase [Paracoccidioides brasiliensis Pb01]
 gi|226283881|gb|EEH39447.1| tyrosyl-tRNA synthetase [Paracoccidioides brasiliensis Pb01]
          Length = 592

 Score =  344 bits (883), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 122/480 (25%), Positives = 216/480 (45%), Gaps = 68/480 (14%)

Query: 5   KSDFLSILSERGFIHQIS-NPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           +  FL ++ ERG ++++  +   L+ + ++  V  Y G D TA SLH GH+   M+L W 
Sbjct: 82  RKSFLELMEERGLVNKVVGDRDALNKMWTERRVGVYAGVDPTAPSLHIGHMLPFMVLAWA 141

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESR----RMMRSQEIQENIEKIKGIFSSFIKYGTG 119
              G + + L+GG TS IGDP+ R++ R    R+ R + +     ++K +  S  +YG  
Sbjct: 142 YVHGIRAVFLLGGSTSQIGDPTDREDPRAKQARVTRKENMVNMHLQLKTLGMSIERYGAK 201

Query: 120 KTDAL-------MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFL 172
              A        ++NN TW     ++++++ +G    +  ML  ++V++RL+  + +S  
Sbjct: 202 HGYAYEPIWRRAIVNNNTWWLKEPFMEVMKTMGESARLGPMLGRDTVKNRLQSGKGMSLA 261

Query: 173 EFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKL----------- 221
           EF Y +LQA+D+ +L +  +  +Q+GGSDQ GNI  GID  + L                
Sbjct: 262 EFTYPLLQAWDWWQLIQQQNVLVQVGGSDQAGNIQFGIDATKSLMKADQDYWRKHAPKPE 321

Query: 222 -------FALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAK 274
                     T+PLLTT SG K GKT   A+WL+K+MT  ++ +Q++  + D +V  + K
Sbjct: 322 DREILEPMGFTTPLLTTPSGEKFGKTAGNAVWLDKDMTPTFDLYQFFIRVPDENVEQYLK 381

Query: 275 RLTTLPMSEIDRMAKLQGKEI--NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIH 332
             T LP+  I  +     ++     A+  +A+E   ++ G  EA +A       F   I 
Sbjct: 382 YFTFLPIPAIKEIMVQHMEDPSKRVAQHKLASEFVELMRGPAEAAQAEKDHRSLFGGQIS 441

Query: 333 ---------SQHM------------PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRH 371
                     + +            P +++ +  +  G     ++  AG A+S  EA R 
Sbjct: 442 TAPEMEARPKRDINLSETSPFNAPSPHVTLPRS-LVVGQFFHKVLWSAGLASSKAEAMRL 500

Query: 372 LKSNAIKI----NNSIISNEKLQI----------KLQDFDSTGNIKLSFGKKNHIICHLC 417
           +  N   +    ++    ++KL              +       + L  GK    I  + 
Sbjct: 501 ILHNGAAVASRSDSKATMDDKLSYVPIKTWNKDATEKFIIDDSLLILRIGKWKVKIVKIV 560


>gi|219856456|ref|YP_002473578.1| hypothetical protein CKR_3113 [Clostridium kluyveri NBRC 12016]
 gi|219570180|dbj|BAH08164.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 404

 Score =  344 bits (883), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 93/404 (23%), Positives = 176/404 (43%), Gaps = 29/404 (7%)

Query: 23  NPRELDILC-----SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGG 77
           +  EL         +   +   +G D +A  +H GH   L  +  +Q  GH+ + ++G  
Sbjct: 22  DEDELRNKLTEFIQNNRPLIIKLGLDPSAPDIHLGHAVVLRKIKQMQDLGHEAVIIIGDF 81

Query: 78  TSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKY 137
           T  IGDPS + + R  +  ++++EN           +     K    +  N  WL  + +
Sbjct: 82  TGKIGDPSGKSKGRNALTDEQVRENARTYFEQIFKVLD----KKKTTVRYNSEWLSKLNF 137

Query: 138 IDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQM 197
            D+LR + +  +V RM+  +  ++R      +   EF Y ++QAYD +EL  +    +++
Sbjct: 138 EDVLR-LAATTTVARMMERDDFQNRFTNNIPIGIHEFFYPLMQAYDSIELNAD----IEL 192

Query: 198 GGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYN 256
           GG+DQ  NI+ G  L + +   +  A+  PLL    G  KM K+L   I + +       
Sbjct: 193 GGTDQTFNILMGRTLQKTMGQSQQVAMFMPLLEGLDGVEKMSKSLENYIGVYESAKV--- 249

Query: 257 FWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEITTMVHGRE 314
            ++    + D  ++ + +  T      I+  R   +QGK   + K  +A  IT++ H  +
Sbjct: 250 MFKKVMEVPDELILKYFELATDEHPDRIEAIRQELVQGKNPRDIKYALAEIITSLYHTEQ 309

Query: 315 EAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKS 374
           E  +A     + F        +P +++     S  + ++ L+V+ GF  S +E RR ++ 
Sbjct: 310 EVIEAKEYYDKAFIKKAIPDQIPELAVKAQ--SHLVEIIPLLVENGFIKSNSEFRRLVQQ 367

Query: 375 NAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLCG 418
           N +++N   + +    +   D        L  GKK  +     G
Sbjct: 368 NGVQLNQHKLKHIDSILLYGD-------VLKIGKKRFVKIIWEG 404


>gi|15894067|ref|NP_347416.1| tyrosyl-tRNA synthetase [Clostridium acetobutylicum ATCC 824]
 gi|81530926|sp|Q97KY6|SYY2_CLOAB RecName: Full=Tyrosyl-tRNA synthetase 2; AltName:
           Full=Tyrosine--tRNA ligase 2; Short=TyrRS 2
 gi|15023666|gb|AAK78756.1|AE007593_4 Tyrosyl-tRNA synthetase [Clostridium acetobutylicum ATCC 824]
 gi|325508194|gb|ADZ19830.1| tyrosyl-tRNA synthetase [Clostridium acetobutylicum EA 2018]
          Length = 400

 Score =  344 bits (882), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 101/407 (24%), Positives = 175/407 (42%), Gaps = 34/407 (8%)

Query: 19  HQISNPRELDILC-----SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
            +I + +EL             +   +G D +A  +H GH   L  L  LQ  GHK + +
Sbjct: 16  EEIIDAKELKEKLIKAEKENTQLVVKLGLDPSAPDIHLGHAVVLRKLKQLQDLGHKIVII 75

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
           +G  T +IGDP+ + ++R+ + SQ++ +N E  +      +     +    +  N  WL 
Sbjct: 76  IGDFTGMIGDPTGKSKTRKQLSSQQVMKNAETYEKQIFKILD----RNKTDLRFNSQWLE 131

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDC 193
            + + +++ E+ S ++V RML  E  + R K +QS+   EF Y ++QAYD + +  +   
Sbjct: 132 KLNFKEVI-ELASKYTVARMLEREDFKKRFKNQQSIGIHEFFYPLMQAYDSMAIKAD--- 187

Query: 194 RLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMT 252
            ++ GG+DQ  N++ G  L       K  A+  PLL    G  KM K+L   I + +   
Sbjct: 188 -IEFGGTDQRFNLLMGRTLQAEYGEEKQIAIFMPLLEGIDGKEKMSKSLGNYIGIEESAK 246

Query: 253 SPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAKKIIATEITTM 309
              + +     I D+ ++ + +  T +    ID + K   +      + K  +A EI  +
Sbjct: 247 ---DMYVKVMQIPDSLIIKYFELCTDMHPDAIDIIRKQLNEDKVNPRDIKMKLAKEIVCL 303

Query: 310 VHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEAR 369
            H   EA  A       F      + +P   +  +       L+  IVK    TS +EAR
Sbjct: 304 YHNEAEALNAEIYFKNLFQDKEIPEDIPIFKVRSEN-----NLIEAIVKINSNTSKSEAR 358

Query: 370 RHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           R +    +K+N   + +        D     N  +  GKK   I  L
Sbjct: 359 RLIAQGGVKLNGRKVIDFN------DIILKSNDVIQIGKKK--IVKL 397


>gi|123969061|ref|YP_001009919.1| tyrosyl-tRNA synthetase [Prochlorococcus marinus str. AS9601]
 gi|123199171|gb|ABM70812.1| Tyrosyl-tRNA synthetase [Prochlorococcus marinus str. AS9601]
          Length = 412

 Score =  344 bits (882), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 94/387 (24%), Positives = 175/387 (45%), Gaps = 28/387 (7%)

Query: 32  SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESR 91
           +   +   +G D T + +H GH      L   Q  GH  + ++G  T+ IGDP+ ++++R
Sbjct: 38  NNKKLRVKLGIDPTGTDIHLGHSILFKKLRAFQDNGHIAVLIIGDFTAQIGDPTGKNKTR 97

Query: 92  RMMRSQEIQENIEKIKGIF-------SSFIKYGTGKTDALMLNNETWLCSIKYIDLLREI 144
             +  +++++N +              S + + +      +  N  WL  +    ++  +
Sbjct: 98  VQLSEKQVKDNAKTYLTQLGMGKPANESILDFDSKDR-IEIRYNSEWLKGLNLNSIIELM 156

Query: 145 GSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWG 204
           GS  +V++ML+ E    R   +  ++  EF Y +LQ YD V +  +    +++GG+DQ  
Sbjct: 157 GS-ATVSQMLAKEEFNKRYTSQVPIALHEFLYPLLQGYDSVVVQSD----IELGGTDQKF 211

Query: 205 NIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
           NI  G DL    K    F +  P+LT   G  KM K+    + L+++   P + +     
Sbjct: 212 NIAIGRDLQRHFKQEPQFGVLLPILTGLDGIKKMSKSEFNTVGLSED---PLSMYSKLEK 268

Query: 264 IDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAA 323
           + D  + ++ + LT L +        L+     E ++ +A E+TT+ HG EEA KA +  
Sbjct: 269 VPDNIIPTYFELLTELDLR------FLENSNPRELQRRMALEVTTLFHGAEEALKAQSNC 322

Query: 324 MECF-DMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNS 382
            + F         +P ISI   EV   +    L+       S++E++R +K   +KI++ 
Sbjct: 323 EKLFLGQKEKVGEIPEISIK--EVVFPVKFFYLLSALKLFKSSSESKRSIKGGGVKIDSQ 380

Query: 383 IISNEKLQIKLQDFDSTGNIKLSFGKK 409
            ++N  L    ++        L  GKK
Sbjct: 381 KVTNPDLVFNSKNDLEGK--ILQIGKK 405


>gi|57505448|ref|ZP_00371376.1| tyrosyl-tRNA synthetase [Campylobacter upsaliensis RM3195]
 gi|57016273|gb|EAL53059.1| tyrosyl-tRNA synthetase [Campylobacter upsaliensis RM3195]
          Length = 402

 Score =  344 bits (882), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 110/423 (26%), Positives = 191/423 (45%), Gaps = 37/423 (8%)

Query: 7   DFLSILSE--RGFIHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLML 59
           +   IL+E  RG   +I +   ++ L               G+D TA  LH GH   L  
Sbjct: 2   NIKEILAEVKRGC-AEIIDEARIEDLIKNYYEKGENFYVKAGFDPTAPDLHLGHSVVLSK 60

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG 119
           + +LQK G +   L+G  T  IGDPS ++ +R+ +  +E+ +N +  +      +     
Sbjct: 61  MAFLQKHGARVQFLIGDFTGQIGDPSGKNATRKKLSQEEVLKNAKTYESQVFKILD---- 116

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
           K    ++ N  WL  +     + E+ S FSV RML  E    R + + S+S  EF Y +L
Sbjct: 117 KNKTDIVFNSKWLNELGAAG-IVELTSTFSVARMLEREDFTKRFREQSSISICEFLYPLL 175

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASGT-KM 237
           Q YD V L  +    ++MGG+DQ  N++ G  L        +   +  PLL    G  KM
Sbjct: 176 QGYDSVALKSD----IEMGGTDQKFNLLMGRTLQRIYDAKKEQAIIMMPLLEGLDGVNKM 231

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID---RMAKLQGKE 294
            K+L+  I + +      + +    +I D  +  + + L+   + EI+      +     
Sbjct: 232 SKSLNNYIGVTENAK---DIYAKILSISDELMFRYYELLSKKSLKEIETIKENIQNGSLH 288

Query: 295 INEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLL 353
               K+ +A E+    H +E A++A       FD    +  +P+  I+K E+  G + L 
Sbjct: 289 PKIVKENLALELVERFHSKELADEA----KAEFDRVHSANALPS-EITKFEIGGGSVWLA 343

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
             +V+ G   ST+ ARR + +N++ +N+  I +E++Q++L      G   L  GK+    
Sbjct: 344 KALVECGLENSTSAARRAIVANSVSVNSQKIRDEQMQLEL------GEYILQIGKRKFAR 397

Query: 414 CHL 416
             +
Sbjct: 398 LKV 400


>gi|113954030|ref|YP_731401.1| tyrosyl-tRNA synthetase [Synechococcus sp. CC9311]
 gi|113881381|gb|ABI46339.1| tyrosyl-tRNA synthetase [Synechococcus sp. CC9311]
          Length = 415

 Score =  344 bits (882), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 94/418 (22%), Positives = 159/418 (38%), Gaps = 40/418 (9%)

Query: 14  ERGF-----------IHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
           ERG            + Q    R          +   +G D T S +H GH      L  
Sbjct: 13  ERGMADLFPDGNPDDVDQALAARMAAAELEGRPLRVKLGIDPTGSDIHLGHSILFRKLRA 72

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSS-------FIK 115
            Q  GH  + ++G  T+ IGDP+ +  +R  + +++++ N                  + 
Sbjct: 73  FQDAGHTAVLIIGDFTARIGDPTGKSATRVQLTTEQVEANATTYLRQLGQGQPKERALLD 132

Query: 116 YGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFN 175
           + T      +  N  WL  +    ++  +G   +V +ML+ +    R      ++  EF 
Sbjct: 133 FETP-GRLEVRRNSEWLGGLDLPQVIGLLG-TATVGQMLAKDDFSKRYGSGTPIALHEFL 190

Query: 176 YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG- 234
           Y +LQ YD V +  +    +++GG+DQ  N+  G DL         F L  P+L    G 
Sbjct: 191 YPLLQGYDSVAVDAD----VELGGTDQKFNVAMGRDLQRHFGQRTQFGLLLPILVGLDGV 246

Query: 235 TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE 294
            KM K+L   + L  +   P + +     + DA +  +   LT LP              
Sbjct: 247 QKMSKSLGNTVGLEDD---PLSMYSKLEKVGDAAINDYLMLLTDLPDES-------FPDN 296

Query: 295 INEAKKIIATEITTMVHGREEAEKAATAAMECFDM-SIHSQHMPTISISKDEVSRGMGLL 353
             + +K +A  +T   +G E A+KA   A          S  +P  S+S   V+      
Sbjct: 297 PRDKQKAMALVVTASRYGMEVAQKAQADAATLVGGSGAASADVPEASLSA--VNFPAKAF 354

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
            L+   G   S++EARR +K  A ++    I++   +             L  GKK  
Sbjct: 355 YLLSAVGICASSSEARRQIKGGAARLEGEKITDPNQEFVSASELEGK--VLQLGKKTF 410


>gi|269926819|ref|YP_003323442.1| tyrosyl-tRNA synthetase [Thermobaculum terrenum ATCC BAA-798]
 gi|269790479|gb|ACZ42620.1| tyrosyl-tRNA synthetase [Thermobaculum terrenum ATCC BAA-798]
          Length = 422

 Score =  344 bits (882), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 102/408 (25%), Positives = 177/408 (43%), Gaps = 30/408 (7%)

Query: 15  RGFIHQISNPRELDILC-----SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
           RG    + +   L             +   +G D T + +H GH   L  L   Q  GH 
Sbjct: 20  RGAEKILPDEEALRYKLTTAQKEGRPLRVKLGIDPTVTDIHLGHTVPLRNLRRFQDLGHT 79

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
            I ++G  T+ +GDPS R ++R  +  +++ EN    K   S  +        A ++ N 
Sbjct: 80  AILVLGDFTATVGDPSGRSKARPPLSHEQVLENAATYKEQVSKILDL----ERAEVVYNS 135

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDFVELA 188
           TWL  +   DL+  IGS  SV RML  E    R +  +Q++   E  Y I+Q  D V + 
Sbjct: 136 TWLAKLTLKDLIF-IGSHISVKRMLEGEYFGRRFEDPDQTVFLHEMFYPIMQGMDSVSIN 194

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWL 247
            +    +++GG+DQ  N + G DL           +T PLL   +GT KM K+L   + +
Sbjct: 195 AD----IELGGTDQEFNCLMGRDLQRLYGQEPQVVVTFPLLPGLTGTEKMSKSLGNYVGV 250

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL---QGKEINEAKKIIAT 304
           +         +     + D  +  + + LT +P+ EI+   +       +  E KK + T
Sbjct: 251 S---WGAQEQFNKLMTMSDDHIGIYYRLLTDVPIEEIEEKIQAIQNGQADPREVKKQLVT 307

Query: 305 EITTMVHGREEAEKAATAAMECFD---MSIHSQHMPT-ISISKDEVS-RGMGLLTLIVKA 359
           EI +  HG E A +AA       +       +  +P+ I ++K +++  G  L  ++V  
Sbjct: 308 EIVSQFHGPEAARRAAEDYERYAEIRRTGGKTDQLPSNIPVAKIKLNPEGTRLTHILVTT 367

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFG 407
           G A+S +EA+R ++   +++   ++ ++   I            L  G
Sbjct: 368 GMASSNSEAKRLIRQGGVRLRGEVVKDDTHVITPGQL---HEALLQVG 412


>gi|88807457|ref|ZP_01122969.1| tyrosyl-tRNA synthetase [Synechococcus sp. WH 7805]
 gi|88788671|gb|EAR19826.1| tyrosyl-tRNA synthetase [Synechococcus sp. WH 7805]
          Length = 400

 Score =  344 bits (882), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 89/393 (22%), Positives = 159/393 (40%), Gaps = 29/393 (7%)

Query: 28  DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFR 87
                   +   +G D T SS+H GH      L   Q  GH  + ++G  T+ IGDP+ +
Sbjct: 23  KAETDGRPLRVKLGIDPTGSSIHLGHSILFRKLRAFQDAGHTAVLIIGDFTARIGDPTGK 82

Query: 88  DESRRMMRSQEIQENIEKIKGIFSS-------FIKYGTGKTDALMLNNETWLCSIKYIDL 140
            ++R  + ++++  N                  + + T      +  N  WL  +    +
Sbjct: 83  SDTRVQLTAEQVDANAATYLAQLGQGQPKDMALLDFETP-GRLEVRRNSEWLEEMDLPAV 141

Query: 141 LREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGS 200
           +  +G   +V +ML+ +    R      ++  EF Y +LQ YD V +  +    +++GG+
Sbjct: 142 INLLG-TATVGQMLAKDDFSKRYGSGTPIALHEFLYPLLQGYDSVAVNAD----VELGGT 196

Query: 201 DQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQ 259
           DQ  N+  G DL         F L  P+L    G  KM K+L   + L ++   P + + 
Sbjct: 197 DQKFNVAMGRDLQRHFGKGTQFGLLLPILVGLDGVQKMSKSLGNVVGLEED---PLSMYS 253

Query: 260 YWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKA 319
               + D  +  +   LT L ++ +            E +K +A  +T   HG   AEKA
Sbjct: 254 KLEKVGDGAINDYVTLLTDLDLAVLPE-------NPREKQKAMALAVTASRHGLAAAEKA 306

Query: 320 ATAAMECFDM-SIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIK 378
            + A          +  +P  S+  ++V+       L+   G   S++EARR +K  A++
Sbjct: 307 QSDAATLVGGAGDAAAEVPEASL--EQVNFPAKAFYLLSAVGICASSSEARRQIKGGAVR 364

Query: 379 INNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           +    IS+   +    +        L  GKK  
Sbjct: 365 LEGEKISDPNQEFASAEELEGK--VLQLGKKTF 395


>gi|298244240|ref|ZP_06968046.1| tyrosyl-tRNA synthetase [Ktedonobacter racemifer DSM 44963]
 gi|297551721|gb|EFH85586.1| tyrosyl-tRNA synthetase [Ktedonobacter racemifer DSM 44963]
          Length = 404

 Score =  344 bits (882), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 99/419 (23%), Positives = 177/419 (42%), Gaps = 28/419 (6%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQG----VVTAYIGYDLTASSLHAGHLTQLMLLF 61
           +  +  +  RG + Q+    +L  L  +G     +   +G D T   L  GH      L 
Sbjct: 2   TQLIDYVLTRG-VAQVEKEADLRRLLLEGNNGEPLRIKLGVDPTHYDLTIGHAVVFRKLR 60

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKT 121
             Q+ GHKP+ ++G  T+ +GDPS R E+R+ +  +++  N       F   +     + 
Sbjct: 61  QFQQLGHKPVVVIGDWTARLGDPSGRVEARKPLTEEQVNANAATYLDQFFRIVDREKTE- 119

Query: 122 DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA 181
              +     W  S    D ++ +G + +V +ML  +    R K    +   EF Y +LQ 
Sbjct: 120 ---VRRQSEWFDSFSLGDAIKLLG-YKTVAQMLERDDFSKRYKSGIEIYLAEFMYPLLQG 175

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKT 240
           YD V L  +    +++GG+DQ  N++ G +L           LT  L+    G  KMGK+
Sbjct: 176 YDSVALRAD----VELGGTDQTFNLLVGRELQPTFGQKSQQILTVNLIVGLDGVKKMGKS 231

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINE 297
           L   I +        + +    ++ D  + ++ + LT +   E++   +   +      +
Sbjct: 232 LDNYIAITAPAN---DMYGKLMSLPDHAMRTYFEALTDVSTEELNEFERKIQEGTLNPRD 288

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
            K+ +A EI T  H   EA++A  A +  F        +P+ ++S         ++ L+V
Sbjct: 289 VKRRMAREIVTEFHTLSEAQEAEEAFIRQFSERKLPTDIPSYTVS-----EPTNIVALMV 343

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD--STGNIKLSFGKKNHIIC 414
            AG A S N+AR  +K   + I     S E  +I   +F         L  GK+ ++  
Sbjct: 344 TAGLAASNNKARELIKQGGVSIFLQGESGEATRITDGEFIVPVAPGAILKVGKRQYLRL 402


>gi|225556817|gb|EEH05105.1| tyrosyl-tRNA synthetase [Ajellomyces capsulatus G186AR]
          Length = 598

 Score =  343 bits (881), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 119/481 (24%), Positives = 214/481 (44%), Gaps = 67/481 (13%)

Query: 3   AFKSDFLSILSERGFIHQIS-NPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
             +  FL ++ ERG ++ +  N   L+ + ++  V  Y+G D TA SLH GH+   M+L 
Sbjct: 78  GTRKSFLELMEERGLVNAVIGNRDALNRMWTERRVGVYVGVDPTAPSLHIGHMLPFMVLA 137

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSF-------- 113
           W    G + + L+GG TS IGDP+ R   R  M S   +EN+  +               
Sbjct: 138 WAYVHGIRAVFLLGGSTSQIGDPTDRLGPRAKMASFTRKENMANMHLQLRRLGMSIERYG 197

Query: 114 IKYGTGKTDAL---MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLS 170
            K+G          ++NN TW     + ++++ +G    +  ML  ++V++RL+  + ++
Sbjct: 198 AKHGYEYEWIWRRAIVNNNTWWLKEPFFEVMKTMGEAVRLGPMLGRDTVKNRLQSGKGMA 257

Query: 171 FLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP----------- 219
             EF Y +LQA+D+ +L +  +  +Q+GGSDQ GNI  G+D  + L              
Sbjct: 258 LSEFVYPLLQAWDWWQLIQQQNVLVQVGGSDQAGNIQFGMDATKPLMKASNEYWRKHAPN 317

Query: 220 -------KLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSF 272
                  +    T+PLLTT SG K GK+   A+WL+++MTS ++ +Q++  + D +V  +
Sbjct: 318 PEDRELLEPMGFTTPLLTTPSGQKFGKSAGNAVWLDQDMTSSFDLYQFFLRVPDENVEQY 377

Query: 273 AKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIATEITTMVHGREEAEKAATAAMECFDMS 330
            K  T LP++ I  + +   ++     A+  +A+E   ++ G  EA +A       F   
Sbjct: 378 LKYFTFLPITAIKELMERHVQDPSKRVAQHKLASEFVELIRGPVEAAQAEKDHRSIFGGQ 437

Query: 331 IHSQHM--------------------PTISISKDEVSRGMGLLTLIVKAGFATSTNEARR 370
             +  M                    P I++ +  +  G     ++  AG A S  EA R
Sbjct: 438 TPTIEMEARTKRDLNLSETHPFNAPSPHITLPRS-LVVGQFFHKVLWSAGMAPSKAEAFR 496

Query: 371 HLKSNAIKI----NNSIISNEKLQI----------KLQDFDSTGNIKLSFGKKNHIICHL 416
            + +N   +    +++ + ++K+              +       + L  GK    I  +
Sbjct: 497 LIVNNGASVASRSDSTAVMDDKMSYVPIKTWDKDMTKKFIIDDSMMILRVGKWKVKIIKI 556

Query: 417 C 417
            
Sbjct: 557 V 557


>gi|37523984|ref|NP_927361.1| tyrosyl-tRNA synthetase [Gloeobacter violaceus PCC 7421]
 gi|81708138|sp|Q7ND21|SYY_GLOVI RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|35214990|dbj|BAC92356.1| tyrosyl tRNA synthetase [Gloeobacter violaceus PCC 7421]
          Length = 402

 Score =  343 bits (880), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 101/389 (25%), Positives = 174/389 (44%), Gaps = 28/389 (7%)

Query: 28  DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFR 87
           D   ++  +   +G D T   LH GH   L  L   Q  GH  I L+GG T+ IGDP+ +
Sbjct: 31  DAETARMPLRVKLGIDPTRPDLHLGHTVVLRKLREFQDLGHTAILLIGGFTAQIGDPTGK 90

Query: 88  DESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSF 147
            E+R  + + E++E  E         + + T +    + NN  WL  +    +++ + S 
Sbjct: 91  SEARPRLSAAEVEEYAETYLDQARLILNFDTLE----VRNNTEWLSGLDLAAIIKLLAST 146

Query: 148 FSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNII 207
            SV +ML+ E    R +   ++   EF Y ++Q YD V L  +    +++GG+DQ  N++
Sbjct: 147 -SVAQMLAKEDFGQRYEAGTAIYLHEFLYPLMQGYDSVALDAD----IELGGTDQRFNLL 201

Query: 208 CGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDD 266
            G +L E        ALT PLL    G  KM K+L   + + ++   P   +       D
Sbjct: 202 MGRNLQELFGKKPQLALTVPLLVGLDGVKKMSKSLDNYVGVTED---PLTMYSKLEKTPD 258

Query: 267 ADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMEC 326
           A V ++ + LT L +S +            E +K +A  +T  +H  E+A +A  AA   
Sbjct: 259 ALVETYFELLTDLSVSAL-------SANPRERQKRLALAVTGWLHSPEQALRAQEAAAAM 311

Query: 327 FDM----SIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNS 382
                      + +P  S++  E++  + L  L+  AG   + +E  R +K+ A+++N  
Sbjct: 312 VTGSGGTGADLEAVPEFSLT--EIAFPVRLANLLKAAGLCPTVSEGMRQIKNGAVRLNQE 369

Query: 383 IISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
            I++           +     L  GKK+ 
Sbjct: 370 RITDPNCGFAEAAELTGA--VLQVGKKHF 396


>gi|240281680|gb|EER45183.1| tyrosyl-tRNA synthetase [Ajellomyces capsulatus H143]
 gi|325087830|gb|EGC41140.1| tyrosyl-tRNA synthetase [Ajellomyces capsulatus H88]
          Length = 598

 Score =  343 bits (880), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 120/481 (24%), Positives = 212/481 (44%), Gaps = 67/481 (13%)

Query: 3   AFKSDFLSILSERGFIHQIS-NPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
             +  FL ++ ERG ++ +  N   L+ + ++  V  Y+G D TA SLH GH+   M+L 
Sbjct: 78  GTRKSFLELMEERGLVNAVIGNRDALNRMWTERRVGVYVGVDPTAPSLHIGHMLPFMVLA 137

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSF-------- 113
           W    G + + L+GG TS IGDP+ R   R  M S   +EN+  +               
Sbjct: 138 WAYVHGIRAVFLLGGSTSQIGDPTDRLGPRAKMASFTRKENMANMHLQLKRLGMSIERYG 197

Query: 114 IKYGTGKTDAL---MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLS 170
            K+G          ++NN TW     + ++++ +G    +  ML  ++V++RL+  + ++
Sbjct: 198 AKHGYEYEWIWRRAIVNNNTWWLKEPFFEVMKTMGEAVRLGPMLGRDTVKNRLQSGKGMA 257

Query: 171 FLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP----------- 219
             EF Y +LQA+D+ +L +  +  +Q+GGSDQ GNI  G+D  + L              
Sbjct: 258 LSEFVYPLLQAWDWWQLIQQQNVLVQVGGSDQAGNIQFGMDATKPLMKASNEYWRKHAPN 317

Query: 220 -------KLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSF 272
                  +    T+PLLTT SG K GK+   A+WL+++MTS ++ +Q++  + D +V  +
Sbjct: 318 PEDRELLEPMGFTTPLLTTPSGQKFGKSAGNAVWLDQDMTSSFDLYQFFLRVPDENVEQY 377

Query: 273 AKRLTTLPMSEIDRMAKLQ--GKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMS 330
            K  T LP++ I  + +          A+  +A+E   ++ G  EA +A       F   
Sbjct: 378 LKYFTFLPITAIKELMERHVQDPSKRVAQHKLASEFVELIRGPVEAAQAEKDHRSIFGGQ 437

Query: 331 IHSQHM--------------------PTISISKDEVSRGMGLLTLIVKAGFATSTNEARR 370
             +  M                    P I++ +  +  G     ++  AG A S  EA R
Sbjct: 438 TPTIEMEARTKRDLNLSETHPFNAPSPHITLPRS-LVVGQFFHKVLWSAGMAPSKAEAFR 496

Query: 371 HLKSNAIKI----NNSIISNEKLQI----------KLQDFDSTGNIKLSFGKKNHIICHL 416
            + +N   +    +++ I ++K+              +       + L  GK    I  +
Sbjct: 497 LIVNNGASVASRSDSTAIMDDKMSYVPIKTWDKDMTKKFIIDDSMMILRVGKWKVKIIKI 556

Query: 417 C 417
            
Sbjct: 557 V 557


>gi|150017276|ref|YP_001309530.1| tyrosyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052]
 gi|149903741|gb|ABR34574.1| tyrosyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052]
          Length = 403

 Score =  343 bits (880), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 94/408 (23%), Positives = 173/408 (42%), Gaps = 27/408 (6%)

Query: 15  RGFIHQISNPRELDILC-----SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
           R  +  I +  +L+            +   +G D TA  +H GH   L  +  +Q  GH+
Sbjct: 13  RKGVADIISIDDLEKKIIKSAKEDKPLIIKLGLDPTAPDIHLGHAVVLRKIKQMQDLGHR 72

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
            + ++G  T  IGDP+ + ++R+ +  +E+ EN    +      +     +    +  N 
Sbjct: 73  AVIIIGDFTGKIGDPTGKSKTRKPLTKEEVVENALTYQKQIFKILDRDKTE----IKFNS 128

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
            WL  + + ++L+ + +  +V RML  E  + R      +   EF Y ++Q YD + L  
Sbjct: 129 EWLSELSFEEVLK-LAATTTVARMLEREDFKKRYNSNTPIGIHEFFYPLMQGYDSIALKA 187

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLN 248
           +    +++GG+DQ  NI+ G  L +     +  A+  P+L    G  KM K+L   I + 
Sbjct: 188 D----IELGGTDQTFNILMGRTLQKNAGMEQQTAIFMPILEGLDGKEKMSKSLGNYIGIQ 243

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIATEI 306
           +        ++    I D  ++ + +  T     +I  + +    GK   + K  +A  I
Sbjct: 244 ESAEI---MFKKVMEIPDDLIIKYYELATDEHPDKIRGIKEELDNGKNPRDVKFELAKII 300

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
           T + H  EE++ A       F        +P I+IS  E S    +  ++VK+    S N
Sbjct: 301 TRLYHAEEESKFALEYFENVFKNKNIPDEVPEINIS-SECSLLEDVGKVLVKSNLIKSYN 359

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           E +R L    + +N   +S+    I        G+I +  GKK  +  
Sbjct: 360 EFKRLLSQGGVYVNMQKVSDFNNII-----IKNGDI-IKLGKKKFVKI 401


>gi|124026461|ref|YP_001015576.1| tyrosyl-tRNA synthetase [Prochlorococcus marinus str. NATL1A]
 gi|123961529|gb|ABM76312.1| Tyrosyl-tRNA synthetase [Prochlorococcus marinus str. NATL1A]
          Length = 415

 Score =  343 bits (880), Expect = 4e-92,   Method: Composition-based stats.
 Identities = 95/393 (24%), Positives = 168/393 (42%), Gaps = 29/393 (7%)

Query: 31  CSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDES 90
             +  +   +G D T + +H GH      L   Q  GH  I ++G  T+ IGDP+ + ++
Sbjct: 41  VDKNPLRVKLGIDPTGTDIHIGHSILFRKLRAFQDAGHTAILIIGDFTARIGDPTGKSKT 100

Query: 91  RRMMRSQEIQENIEKIKGIF-------SSFIKYGTGKTDALMLNNETWLCSIKYIDLLRE 143
           R  +   E++ N                S + + T  +   +  N  WL ++    ++ E
Sbjct: 101 RIQLSKDEVEANALNYLEQLGLGKEPKDSLLDFSTP-SRIEIRRNSEWLENLNLSKVI-E 158

Query: 144 IGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQW 203
           + S  +V +ML+ E   +R K    +S  EF Y +LQ YD V +  +    +++GG+DQ 
Sbjct: 159 LLSNSTVGQMLAKEDFSNRYKSGTPISLHEFLYPLLQGYDSVAINSD----VELGGTDQK 214

Query: 204 GNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWR 262
            NI  G DL         F +  P+L    GT KM K+L   + +N++     + +    
Sbjct: 215 FNIAMGRDLQRAFGQKPQFGMLLPILVGLDGTRKMSKSLDNIVGINEDSL---SMYSKLE 271

Query: 263 NIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATA 322
            + D  V+++   LT   + E+            E +K +A +IT+   G E A+ A   
Sbjct: 272 KVPDDLVLTYLNLLTNENLKEL-------SSNPREVQKFMALKITSNFKGIEAAKNAQFN 324

Query: 323 AMECFDMSIHS-QHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINN 381
           + +    +  S + +P  S+S   V+       L  K    +S++EARR +    ++I+ 
Sbjct: 325 SEKLVLGTKDSLEEIPEASVSN--VNFPAKAFYLFSKMEMCSSSSEARRQILGGGVRIDG 382

Query: 382 SIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
             I +  L+    D        L  GKK  +  
Sbjct: 383 EKIMDPNLEFHTPDDLIGK--ILQVGKKKFLRV 413


>gi|187933167|ref|YP_001885896.1| tyrosyl-tRNA synthetase [Clostridium botulinum B str. Eklund 17B]
 gi|187721320|gb|ACD22541.1| tyrosine--tRNA ligase [Clostridium botulinum B str. Eklund 17B]
          Length = 404

 Score =  343 bits (880), Expect = 4e-92,   Method: Composition-based stats.
 Identities = 88/386 (22%), Positives = 168/386 (43%), Gaps = 22/386 (5%)

Query: 19  HQISNPRELDILC-----SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
             I +  EL             +T  +G D +A  +H GH   L  +  +Q  GH+ + L
Sbjct: 17  ADIISIEELKEKLIKSENENKPLTIKLGLDPSAPDIHLGHAVVLRKIKQMQDLGHRAVIL 76

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
           +G  T  IGDP+ + ++R+ +  +++ EN    +      +     K    +  N  WL 
Sbjct: 77  IGDFTGKIGDPTGKSKTRKPLTQEQVIENAMTYQKQILKVLD----KEKTEIRFNSEWLS 132

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDC 193
            +K+ ++L+ + +  +V RML  +  ++R      +   EF Y ++Q YD + L  +   
Sbjct: 133 KLKFEEVLK-LAATTTVARMLERDDFKNRYSNNAPIGIHEFFYPLMQGYDSIVLKAD--- 188

Query: 194 RLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMT 252
            +++GG+DQ  NI+ G  L + +   +  A+  P+L    G  KM K+L   I +++   
Sbjct: 189 -IELGGTDQTFNILMGRTLQKGMGMEQQIAIFMPILEGLDGVEKMSKSLGNYIGVDE--- 244

Query: 253 SPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATEITTMV 310
                ++    + D  ++ + +  T      ID +      GK   + K  +A  IT++ 
Sbjct: 245 QSEVMFKKIMEVPDNLIIKYFELATDEHPDRIDEIKNDLENGKNPRDIKLELAKIITSLY 304

Query: 311 HGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARR 370
           H  EE + A     + F        +P I+I K+ +     +  ++V  G   S  E RR
Sbjct: 305 HSEEETKAAIEYYEQVFKNGCLPSEVPEINIPKEFLKLKE-ISRILVDEGLVPSNKEFRR 363

Query: 371 HLKSNAIKINNSII-SNEKLQIKLQD 395
            ++   ++IN   +   +  +I   D
Sbjct: 364 LVEQGGVQINTEKVLEFDNAKINDND 389


>gi|77414929|ref|ZP_00791029.1| tyrosyl-tRNA synthetase [Streptococcus agalactiae 515]
 gi|77159020|gb|EAO70231.1| tyrosyl-tRNA synthetase [Streptococcus agalactiae 515]
          Length = 300

 Score =  343 bits (880), Expect = 4e-92,   Method: Composition-based stats.
 Identities = 104/301 (34%), Positives = 162/301 (53%), Gaps = 11/301 (3%)

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M+NN  W  +I +ID LR++G +F+VN M+S ESV+ R+  E  +S+ EF Y I+Q YDF
Sbjct: 1   MVNNYDWFSNISFIDFLRDVGKYFTVNYMMSKESVKKRI--ETGISYTEFAYQIMQGYDF 58

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
            EL KNY+  LQ+GGSDQWGN+  G +L  R        +T PL+T ++G K GK+   A
Sbjct: 59  YELNKNYNVTLQIGGSDQWGNMTAGTELIRRKSNGVSHVMTVPLITDSTGKKFGKSEGNA 118

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKII 302
           +WL+ + TSPY  +Q+W N+ DAD V F K  T L + EI+  R+   +      A+K +
Sbjct: 119 VWLDADKTSPYEMYQFWLNVMDADAVRFLKIFTFLSLKEIEDIRIQFEEAPHQRLAQKTL 178

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSI-------HSQHMPTISISKDEVSRGMGLLTL 355
           A E+ T+VHG +  ++A     + F  +I         Q +  +     +    + ++ L
Sbjct: 179 AREVVTLVHGEKAYKEAVNITEQLFAGNIKGLSVKELKQGLRGVPNYHVQTEDNLNIIDL 238

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +V +G   S  +AR  + + AI IN   I + +  I   D        +  GKK + + +
Sbjct: 239 LVTSGVVNSKRQAREDVSNGAIYINGDRIQDLEYTISENDKLENEITVIRRGKKKYFVLN 298

Query: 416 L 416
            
Sbjct: 299 F 299


>gi|162448779|ref|YP_001611146.1| hypothetical protein sce0509 [Sorangium cellulosum 'So ce 56']
 gi|161159361|emb|CAN90666.1| tyrS [Sorangium cellulosum 'So ce 56']
          Length = 409

 Score =  342 bits (879), Expect = 4e-92,   Method: Composition-based stats.
 Identities = 96/406 (23%), Positives = 183/406 (45%), Gaps = 37/406 (9%)

Query: 26  ELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDP 84
           EL+    +G  +    G+D T   LH GH   +  +   Q+ GH  + ++G  T+++GDP
Sbjct: 23  ELEERIREGKPLRVKAGFDPTRPDLHLGHTVVMQKMREFQELGHHVVFVVGDFTAMVGDP 82

Query: 85  SFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREI 144
           + ++E R  +  +E+    E  +      +     K    +  N  WL  +    ++ E+
Sbjct: 83  TGKNELRPRLSREEVVAAAETYQAQAFKVLD----KNRTEVRYNSEWLNKLDPTQMI-EL 137

Query: 145 GSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWG 204
            + ++V RML  +  + R +  + +   EF Y +LQAYD VEL    +  +++GG+DQ  
Sbjct: 138 CAKYTVARMLERDDFKKRYEEARPIYVHEFMYPLLQAYDSVEL----EADIELGGTDQLF 193

Query: 205 NIICGIDLGERLKTPKLFALTSPLLTTAS---------GTKMGKTLSGAIWLNKEMTSPY 255
           N++   DL  R        +T PLL   +         G KM K+    + + +    P+
Sbjct: 194 NLLVARDLMPRYGKRAQMVMTMPLLEGTNARVEDGKVVGAKMSKSADNYVGITEP---PF 250

Query: 256 NFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKE-INEAKKIIATEITTMVHG 312
           +  Q    +DD  +  + + L++ P  EI   R A L+G++ +   K++ A EI T  H 
Sbjct: 251 DMLQKLMLVDDGVIWRYMELLSSRPPEEIAALREAVLRGEQGVIGVKELFAQEIVTRFHS 310

Query: 313 REEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHL 372
            E+A  A              +++  + ++ D     + +   +  AG A ST+ ARR +
Sbjct: 311 AEDARAALERRRSVAAGG-LPENIEELQVASDR--DTIPIGNALALAGLAESTSAARRLV 367

Query: 373 KSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN----HIIC 414
           K  A+ +   ++ +E+L+++           +  G KN    +++ 
Sbjct: 368 KGGAVHLEGEVVKDEQLKLE-----RGKRYLVRVGSKNRRFAYLVV 408


>gi|322694649|gb|EFY86473.1| Tyrosyl-tRNA synthetase [Metarhizium acridum CQMa 102]
          Length = 624

 Score =  342 bits (879), Expect = 4e-92,   Method: Composition-based stats.
 Identities = 119/467 (25%), Positives = 196/467 (41%), Gaps = 57/467 (12%)

Query: 8   FLSILSERGFIHQISN-PRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
              +L ERG+I  ++  P ++  +     + AY+G D TA SLH GHL   M LFWL   
Sbjct: 67  VWDVLDERGYIKDVAGTPAKIKEVMRIKRIGAYVGVDPTADSLHIGHLLPFMPLFWLWFN 126

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFI--------KYGT 118
           G+  ++L+GG T+ IGDP+ R +SR  M + EI +N+ KI    +           KYG 
Sbjct: 127 GYPAVTLLGGATARIGDPTGRLQSREHMPNSEISKNVTKIHYQLTRLWRNVVVLREKYGY 186

Query: 119 GKTDA---LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFN 175
            K  A    +LNN  WL  +   D  + +     +  MLS ++V+ ++     +S  EF 
Sbjct: 187 EKDWAAKRHLLNNNMWLQGLSVYDFTKRLARNTRIGPMLSRDTVKRKMTEGDGMSLGEFM 246

Query: 176 YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK--------------TPKL 221
           Y + Q +DF  +      ++Q+GGSDQ+GNI+ GID  + ++                + 
Sbjct: 247 YPLFQGWDFWHMYNKLGVQMQIGGSDQYGNIVAGIDALKVIRDSEEASHAKMPTEWQHEP 306

Query: 222 FALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPM 281
              T PLL  ++G K GK+   A+WL++  TSP+  + Y+    D +V    K  T +PM
Sbjct: 307 MGFTVPLLLDSAGVKFGKSAGNAVWLDEFKTSPFELYGYFMRRADDEVEKLLKLFTFMPM 366

Query: 282 SEIDRMAKLQGKEI--NEAKKIIATEITTMVHGREEAEKAATAAMECFDMS--------- 330
           ++I         +     A+  +A E+ ++V+G + A + A      F            
Sbjct: 367 AQIHETMTQHRADPSKRVAQHTLAFEVLSLVYGSQRALQEAQQHKFRFGGELPHVTNEPS 426

Query: 331 -----IHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIIS 385
                +   + P   I        +    L+   G A+S ++ +R +      +      
Sbjct: 427 KDSGIVTPNNAPRSDIQLPRSVMKLSPAKLLFATGLASSNSDGQRLVAQQGAYVAAQPGQ 486

Query: 386 NEKLQI---------------KLQDFDSTGNIKLSFGKKNHIICHLC 417
              L                   +       + L  GK N  I  L 
Sbjct: 487 TRGLVPGNLSWTPMKMWFPEETAKYLIDEKILILRKGKHNVRIVELV 533


>gi|124022271|ref|YP_001016578.1| tyrosyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9303]
 gi|123962557|gb|ABM77313.1| Tyrosyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9303]
          Length = 408

 Score =  342 bits (879), Expect = 5e-92,   Method: Composition-based stats.
 Identities = 101/418 (24%), Positives = 167/418 (39%), Gaps = 40/418 (9%)

Query: 14  ERGFI----------HQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFW 62
           ERG +                  LD    Q   +   +G D T   +H GH      L  
Sbjct: 6   ERGMVDLFPSGQWGDADQQLATRLDEAREQNRPLRVKLGIDPTGRDIHLGHSILFRKLRA 65

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSS-------FIK 115
            Q  GH  + ++G  T+ IGDP+ +  +R  + S++I+ N                  + 
Sbjct: 66  FQDAGHTAVLIIGDFTARIGDPTGKSSTRVQLTSEQIEANAATYLSQLGQGQSAEKALLD 125

Query: 116 YGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFN 175
           + T      +  N  WL  +   +++  +G   +V +ML+ E   +R      ++  EF 
Sbjct: 126 F-TTPGRLEVRRNTEWLADLDLPEVIGLLG-TATVGQMLAKEDFGNRYGSGIPIALHEFL 183

Query: 176 YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG- 234
           Y +LQ YD V +  +    +++GG+DQ  N+  G DL         F L  P+L    G 
Sbjct: 184 YPLLQGYDSVAVQAD----VELGGTDQKFNVAMGRDLQRHFDQRPQFGLLLPILAGLDGV 239

Query: 235 TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE 294
            KM K+LS  + LN++   P + +     I DA V S+   LT L    +          
Sbjct: 240 QKMSKSLSNTVGLNED---PLSMYSKLEKIPDALVSSYVVLLTDLDPEALPV-------N 289

Query: 295 INEAKKIIATEITTMVHGREEAEKAATAAMECFDMS-IHSQHMPTISISKDEVSRGMGLL 353
             E +K +A  +T   HG   AE A   A      S   +  +P   ++  +V+      
Sbjct: 290 PRERQKAMALAVTASRHGIAAAEAAQNDAARLVSGSQDDAASVPEALLA--DVNFPAKAF 347

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
            L+   G   S++EARR +K  A++++   I++  L+             L  GKK  
Sbjct: 348 YLLSAIGLCASSSEARRQIKGGAVRLDGEKITDPNLEFTDSSLLMGK--VLQVGKKTF 403


>gi|188589972|ref|YP_001921276.1| tyrosyl-tRNA synthetase [Clostridium botulinum E3 str. Alaska E43]
 gi|188500253|gb|ACD53389.1| tyrosyl-tRNA synthetase [Clostridium botulinum E3 str. Alaska E43]
          Length = 404

 Score =  342 bits (879), Expect = 5e-92,   Method: Composition-based stats.
 Identities = 88/386 (22%), Positives = 168/386 (43%), Gaps = 22/386 (5%)

Query: 19  HQISNPRELDILC-----SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
             I +  EL             +T  +G D +A  +H GH   L  +  +Q  GH+ + L
Sbjct: 17  ADIISIDELKEKLIKSEKENKPLTIKLGLDPSAPDIHLGHAVVLRKIKQMQDLGHRAVIL 76

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
           +G  T  IGDP+ + ++R+ +  +++ EN    +      +     K    +  N  WL 
Sbjct: 77  IGDFTGKIGDPTGKSKTRKPLTQEQVIENAMTYQKQILKVLD----KEKTEIRFNSEWLS 132

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDC 193
            +K+ ++L+ + +  +V RML  +  ++R      +   EF Y ++Q YD + L  +   
Sbjct: 133 KLKFEEVLK-LAATTTVARMLERDDFKNRYSNNAPIGIHEFFYPLMQGYDSIVLKAD--- 188

Query: 194 RLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMT 252
            +++GG+DQ  NI+ G  L + +   +  A+  P+L    G  KM K+L   I ++++  
Sbjct: 189 -IELGGTDQTFNILMGRTLQKGMGMEQQIAIFMPILEGLDGVEKMSKSLGNYIGVDEQAE 247

Query: 253 SPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATEITTMV 310
                ++    + D  ++ + +  T      ID +      GK   + K  +A  IT++ 
Sbjct: 248 V---MFKKIMEVPDNLIIKYFELATDEHPDRIDEIKSDLENGKNPRDVKLELAKIITSLY 304

Query: 311 HGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARR 370
           H  EE   A     + F        +P I+I K+ +     +  ++V  G   S  E RR
Sbjct: 305 HSEEETRAAIEYYEQVFKNGCLPSEVPEINIPKEFLKLKE-ISKILVDEGLVPSNKEFRR 363

Query: 371 HLKSNAIKINNSII-SNEKLQIKLQD 395
            ++   ++IN   +   +  +I   D
Sbjct: 364 LVEQGGVQINTEKVLEFDDAKINDND 389


>gi|115305815|sp|Q7TUT0|SYY_PROMM RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
          Length = 415

 Score =  342 bits (878), Expect = 5e-92,   Method: Composition-based stats.
 Identities = 98/395 (24%), Positives = 163/395 (41%), Gaps = 30/395 (7%)

Query: 27  LDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPS 85
           LD    Q   +   +G D T   +H GH      L   Q  GH  + ++G  T+ IGDP+
Sbjct: 36  LDEAREQNRPLRVKLGIDPTGRDIHLGHSILFRKLRAFQDAGHTAVLIIGDFTARIGDPT 95

Query: 86  FRDESRRMMRSQEIQENIEKIKGIFSS-------FIKYGTGKTDALMLNNETWLCSIKYI 138
            +  +R  + S++I+ N                  + + T      +  N  WL  +   
Sbjct: 96  GKSSTRVQLTSEQIEANATTYLAQLGQGQSAEKALLDF-TTPGRLEVRRNTEWLADLDLP 154

Query: 139 DLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMG 198
           +++  +G   +V +ML+ E   +R      ++  EF Y +LQ YD V +  +    +++G
Sbjct: 155 EVIGLLG-TATVGQMLAKEDFGNRYGSGVPIALHEFLYPLLQGYDSVAVQAD----VELG 209

Query: 199 GSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNF 257
           G+DQ  N+  G DL         F L  P+L    G  KM K+LS  + LN++   P + 
Sbjct: 210 GTDQKFNVAMGRDLQRHFDQRPQFGLLLPILAGLDGVQKMSKSLSNTVGLNED---PLSM 266

Query: 258 WQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAE 317
           +     + DA V S+   LT L    +            E +K +A  +T   HG   AE
Sbjct: 267 YSKLEKVPDALVSSYVVLLTDLDPEALPV-------NPRERQKAMAIAVTASRHGIAAAE 319

Query: 318 KAATAAMECFDMS-IHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNA 376
            A   A      S   +  +P   +S  +V+       L+   G   S++EARR +K  A
Sbjct: 320 AAQNDAARLVSGSQDDAASVPEAFLS--DVNFPAKAFYLLSAIGLCASSSEARRQIKGGA 377

Query: 377 IKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           ++++   I++  L+             L  GKK  
Sbjct: 378 VRLDGEKITDPNLEFTDSSLLMGK--VLQVGKKTF 410


>gi|196000568|ref|XP_002110152.1| hypothetical protein TRIADDRAFT_21492 [Trichoplax adhaerens]
 gi|190588276|gb|EDV28318.1| hypothetical protein TRIADDRAFT_21492 [Trichoplax adhaerens]
          Length = 416

 Score =  342 bits (878), Expect = 6e-92,   Method: Composition-based stats.
 Identities = 119/400 (29%), Positives = 198/400 (49%), Gaps = 32/400 (8%)

Query: 37  TAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRS 96
           +AY G D TA SLH G+L  +M L  L++ GH P  ++GG T +IGDPS R + R  +  
Sbjct: 6   SAYAGIDPTAESLHVGNLVTIMTLLHLRRAGHIPYFVIGGSTGLIGDPSGRLKERDPLSI 65

Query: 97  QEIQENIEKIKGIFSSFI--KYG------------TGKTDALMLNNETWLCSIKYIDLLR 142
             +  N+++I+   S  +   +             +     ++LNN TW  +   ++ L 
Sbjct: 66  NTVTHNVQEIQCQISDLLHNDFNMWSDKDQLLFKQSRNFGDVILNNATWYENFNIVNFLS 125

Query: 143 EIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQ 202
            +G  F +  MLS +SV+ RL   + +   EF Y + QAYDF  +    +C +Q+GGSDQ
Sbjct: 126 SVGRHFRMGAMLSRDSVKQRLNSPEGMCLTEFFYQVFQAYDFQRMCAERNCHIQVGGSDQ 185

Query: 203 WGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWR 262
           WGNI+ G +   ++   ++  LT PLLT ASG K+GK+L  AIWL++  TS Y F+QY+ 
Sbjct: 186 WGNIVAGCEFIHKVDGKRVHGLTVPLLTNASGEKLGKSLGNAIWLSRAKTSLYEFYQYFM 245

Query: 263 NIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEINEAKKIIATEITTMVHG-------- 312
             +DADV  F K  T +P+++I  +    L+  E     KI+A E+  +VHG        
Sbjct: 246 RTEDADVEKFLKIFTFIPVNDIRNIVARHLEKPEERYGTKILANEVARLVHGGNKHTILR 305

Query: 313 --REEAEKAATAAMECFDMSIHS--QHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
                   +    ++     +    + +P I +  D   +   +  L +  G   S N+ 
Sbjct: 306 FFYYYFYLSLYIFIDFLANKLQQILRDVPNIQLKWD---KSRNMAELALNCGAVPSFNQG 362

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQ-DFDSTGNIKLSFG 407
           R+ ++S    +N++ I++ K +++            +  G
Sbjct: 363 RKLIESGGFYVNDTKITDYKAKVESDIRRLDGRITVVRTG 402


>gi|242786648|ref|XP_002480847.1| tyrosyl-tRNA synthetase, mitochondrial precursor (tyrosine--tRNA
           ligase) (tyrrs) [Talaromyces stipitatus ATCC 10500]
 gi|218720994|gb|EED20413.1| tyrosyl-tRNA synthetase, mitochondrial precursor (tyrosine--tRNA
           ligase) (tyrrs) [Talaromyces stipitatus ATCC 10500]
          Length = 632

 Score =  342 bits (878), Expect = 6e-92,   Method: Composition-based stats.
 Identities = 123/498 (24%), Positives = 205/498 (41%), Gaps = 90/498 (18%)

Query: 5   KSDFLSILSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           +  FL  L ER  ++Q+  PRE LD + +      Y G D TA SLH GH+  +M+L W 
Sbjct: 85  RKAFLDHLEERELVNQVVGPREVLDKVFTDKRTGLYTGIDPTAPSLHVGHMLPIMVLAWA 144

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSF--------IK 115
              G+    ++GG T+  GDP+ R   R+         N+  +                +
Sbjct: 145 FNWGYPIHFILGGATARFGDPTGRLGPRQTEHRSVRTANMASMHMQLKRISASIEDYGRR 204

Query: 116 YGTGKTDALML---NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFL 172
           +G  K  A      NN  W     ++++LR++G    +  ML  ++V++RL+    +SF 
Sbjct: 205 HGYKKEWAWRRALTNNNVWWNGTPFVEVLRDLGMHMRLGPMLGRDTVKTRLE-GNGMSFA 263

Query: 173 EFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLF---------- 222
           EF+Y ++QA+D+ EL K    ++Q+GGSDQ+GNI+ G++  ++                 
Sbjct: 264 EFSYPLMQAWDWWELFKK-GVQVQVGGSDQFGNILFGMEAVKQTAKNTAIEIDRRPVEED 322

Query: 223 -----ALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT 277
                 LT+PLLTT+SG K+GK+   A+WL+K+MTS +  +QY+    D  V  + K  T
Sbjct: 323 ADKPAGLTTPLLTTSSGEKIGKSAGNAVWLDKDMTSTFELYQYFVRTPDDQVERYLKMFT 382

Query: 278 TLPMSEIDRMAKL--QGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMS----- 330
            LP+ +I ++ +   Q      A+  +A E   +VHG  EAE AAT   + F        
Sbjct: 383 FLPLDKITQLMEETRQDPSKRVAQHALAREFVDIVHGPIEAEAAATQHRQLFRPRSSISE 442

Query: 331 -----IHSQHMP--------------------------------TISISKDEVSRGMGLL 353
                    ++P                                 +++ +  V     L 
Sbjct: 443 PTPPPTQPSNIPPHLANDPKYSFMNRAAGNKFAKPTNYKNMESNRVTLPRSLVLE-QPLA 501

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQ---------------IKLQDFDS 398
            ++  AG   S +E  R +    + +  S   +                           
Sbjct: 502 KVLYNAGLVVSNSEGHRLIVGKGVSV-GSRPGDSGQMSDALEFTPIKTWVPAKTPDFLID 560

Query: 399 TGNIKLSFGKKNHIICHL 416
              + +  GK    +  L
Sbjct: 561 GNLLIIKIGKWKLKLIEL 578


>gi|78213618|ref|YP_382397.1| tyrosyl-tRNA synthetase [Synechococcus sp. CC9605]
 gi|115305827|sp|Q3AHU0|SYY_SYNSC RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|78198077|gb|ABB35842.1| tyrosyl-tRNA synthetase [Synechococcus sp. CC9605]
          Length = 415

 Score =  342 bits (878), Expect = 7e-92,   Method: Composition-based stats.
 Identities = 90/389 (23%), Positives = 157/389 (40%), Gaps = 29/389 (7%)

Query: 32  SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESR 91
               +   +G D T S++H GH      L   Q  GH  + ++G  T+ IGDP+ +  +R
Sbjct: 42  EGRPLRVKLGIDPTGSNIHLGHSILFRKLRAFQDGGHTAVLIIGDFTARIGDPTGKSATR 101

Query: 92  RMMRSQEIQENIEKIKGIFSS-------FIKYGTGKTDALMLNNETWLCSIKYIDLLREI 144
             +  +++  N                  + + T      +  N  WL  +    ++  +
Sbjct: 102 VQLSKEQVAANASTYLRQLGQDQPKETALLDFETP-GRLEVRYNSEWLEGMDLPAVIGLL 160

Query: 145 GSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWG 204
           G   +V +ML+ +    R      ++  EF Y +LQ YD V +  +    +++GG+DQ  
Sbjct: 161 G-TGTVGQMLAKDDFSKRYGSGTPIALHEFLYPLLQGYDSVAVNAD----VELGGTDQKF 215

Query: 205 NIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
           N+  G DL         F L  P+L    G  KM K+L   + L ++   P + +     
Sbjct: 216 NVAMGRDLQRHFNKGTQFGLLLPILVGLDGVQKMSKSLGNVVGLEED---PLSMYSKLEK 272

Query: 264 IDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAA 323
           + DA +  +   LT L ++ +            E +K +A  +T   HG E A+KA + A
Sbjct: 273 VGDAAIDDYVTLLTDLDLASLPD-------NPREKQKAMALAVTASRHGIEAAQKAQSDA 325

Query: 324 MECFDMSIHSQ-HMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNS 382
                 S  +   +P  S++  EV+       L    G   S++EARR +K  A ++   
Sbjct: 326 ATLVGGSGDAGADVPEASLA--EVNFPAKAFYLFSAVGICASSSEARRQIKGGAARLEGE 383

Query: 383 IISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
            I++   +             L  GKK  
Sbjct: 384 KITDPNQEFTSAAELEGK--VLQLGKKTF 410


>gi|317969063|ref|ZP_07970453.1| tyrosyl-tRNA synthetase [Synechococcus sp. CB0205]
          Length = 420

 Score =  342 bits (877), Expect = 7e-92,   Method: Composition-based stats.
 Identities = 92/392 (23%), Positives = 164/392 (41%), Gaps = 32/392 (8%)

Query: 32  SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESR 91
           +   +   +G D T S +H GH      L   Q  GH  + ++G  T+ IGDP+ +  +R
Sbjct: 43  ASRPLRIKLGIDPTGSDIHLGHSILFRKLRAFQDAGHTAVLIIGDFTARIGDPTGKSATR 102

Query: 92  RMMRSQEIQENIEKIKGIFSS-------FIKYGTGKTDALMLNNETWLCSIKYIDLLREI 144
             + ++E++ N                  + + T      +  N  WL S+    ++  +
Sbjct: 103 VQLTAEEVESNARTYLQQLGQGQDPARALLDFETP-GRLEVRRNSEWLASLDLPKVIELL 161

Query: 145 GSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWG 204
           G   +V +ML+ E   +R      +S  EF Y +LQ YD V +  +    L++GG+DQ  
Sbjct: 162 G-ISTVGQMLAKEDFANRYGSGTPISLHEFLYPLLQGYDSVAVQAD----LELGGTDQKF 216

Query: 205 NIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
           N+  G DL         F +  P+L    G  KM K+L   + L ++   P + +     
Sbjct: 217 NVAMGRDLQRHFGQRTQFGMLLPILAGLDGVQKMSKSLGNTVGLAED---PLSMYSKLEK 273

Query: 264 IDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAA 323
           + DA V  +   LT L ++ +            E +K +A E+T   HG+  A++A   A
Sbjct: 274 VPDAAVEEYLTLLTNLDLAALPD-------NPRERQKAMALEVTRQRHGQAAADQAQADA 326

Query: 324 MECFDM----SIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKI 379
            +              +P  S++  EV+       L+   G   S++EARR ++   +K+
Sbjct: 327 GKLVGGAKGSGAADAEVPEASLA--EVNFPAKAFYLLSAVGICASSSEARRQIQGGGVKL 384

Query: 380 NNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           +   +++   +    D  +     L  GKK  
Sbjct: 385 DGEKLADPNQEFAGPDQLAGK--VLQLGKKTF 414


>gi|33863670|ref|NP_895230.1| tyrosyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9313]
 gi|33635253|emb|CAE21578.1| t-RNA synthetase, class Ib:Tyrosyl-tRNA synthetase [Prochlorococcus
           marinus str. MIT 9313]
          Length = 408

 Score =  342 bits (877), Expect = 8e-92,   Method: Composition-based stats.
 Identities = 98/395 (24%), Positives = 163/395 (41%), Gaps = 30/395 (7%)

Query: 27  LDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPS 85
           LD    Q   +   +G D T   +H GH      L   Q  GH  + ++G  T+ IGDP+
Sbjct: 29  LDEAREQNRPLRVKLGIDPTGRDIHLGHSILFRKLRAFQDAGHTAVLIIGDFTARIGDPT 88

Query: 86  FRDESRRMMRSQEIQENIEKIKGIFSS-------FIKYGTGKTDALMLNNETWLCSIKYI 138
            +  +R  + S++I+ N                  + + T      +  N  WL  +   
Sbjct: 89  GKSSTRVQLTSEQIEANATTYLAQLGQGQSAEKALLDF-TTPGRLEVRRNTEWLADLDLP 147

Query: 139 DLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMG 198
           +++  +G   +V +ML+ E   +R      ++  EF Y +LQ YD V +  +    +++G
Sbjct: 148 EVIGLLG-TATVGQMLAKEDFGNRYGSGVPIALHEFLYPLLQGYDSVAVQAD----VELG 202

Query: 199 GSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNF 257
           G+DQ  N+  G DL         F L  P+L    G  KM K+LS  + LN++   P + 
Sbjct: 203 GTDQKFNVAMGRDLQRHFDQRPQFGLLLPILAGLDGVQKMSKSLSNTVGLNED---PLSM 259

Query: 258 WQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAE 317
           +     + DA V S+   LT L    +            E +K +A  +T   HG   AE
Sbjct: 260 YSKLEKVPDALVSSYVVLLTDLDPEALPV-------NPRERQKAMAIAVTASRHGIAAAE 312

Query: 318 KAATAAMECFDMS-IHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNA 376
            A   A      S   +  +P   +S  +V+       L+   G   S++EARR +K  A
Sbjct: 313 AAQNDAARLVSGSQDDAASVPEAFLS--DVNFPAKAFYLLSAIGLCASSSEARRQIKGGA 370

Query: 377 IKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           ++++   I++  L+             L  GKK  
Sbjct: 371 VRLDGEKITDPNLEFTDSSLLMGK--VLQVGKKTF 403


>gi|94970096|ref|YP_592144.1| tyrosyl-tRNA synthetase [Candidatus Koribacter versatilis Ellin345]
 gi|94552146|gb|ABF42070.1| tyrosyl-tRNA synthetase [Candidatus Koribacter versatilis Ellin345]
          Length = 413

 Score =  341 bits (876), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 101/404 (25%), Positives = 173/404 (42%), Gaps = 29/404 (7%)

Query: 19  HQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
            +I    +L     +       +    G+D TA  LH GH   +  L   Q  GH  I L
Sbjct: 19  AEIIRESDLRERLEKSRQSGKPLRVKAGFDPTAPDLHLGHTVLMRKLKHFQDLGHTVIFL 78

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
           +G  TS+IGDP+ R  +R  +  ++I +N E  K      +     +    +  N  WL 
Sbjct: 79  IGDFTSLIGDPTGRIATRPPLTREQIDQNAETYKAQVFKILDGAKTE----VRFNSEWLG 134

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDC 193
            + Y  L+R + + F+V++ML  +    R   E+ ++  EF Y + QAYD V L    + 
Sbjct: 135 KLDYEKLIR-LTAKFTVSQMLERDDFHKRYTDEKPIAMHEFLYPVAQAYDSVCL----EA 189

Query: 194 RLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMT 252
            +++GG+DQ  N++ G +L      P    LT PLL    G  KM K+    I + +   
Sbjct: 190 DVELGGTDQKFNLLMGRELQRHYNQPSQIVLTMPLLEGTDGVQKMSKSYGNYIGITE--- 246

Query: 253 SPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG---KEINEAKKIIATEITTM 309
           +P   +    +I DA +  + + LT +   EI+ +            + K+ +   I   
Sbjct: 247 APEEMFGKVMSISDALMWRYYELLTDVKTEEIEALKAKVAAGEAHPMKVKQDLGKIIIRD 306

Query: 310 VHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV----SRGMGLLTLIVKAGFATST 365
            H  E AE AA    + F        +  ++++  ++       + L  ++ KAG A S 
Sbjct: 307 FHNAEAAEHAAENWSKQFQKKEVPDELEEVALTAADIGLDGGTSVRLDRVLAKAGLADSM 366

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
            +A R +K  A++I++ + S   L I            +  GK+
Sbjct: 367 TDAGRKIKVGAVRIDSEVASAPHLTIAG---LPASW-VIRVGKR 406


>gi|251778285|ref|ZP_04821205.1| tyrosine--tRNA ligase [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
 gi|243082600|gb|EES48490.1| tyrosine--tRNA ligase [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
          Length = 404

 Score =  341 bits (876), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 89/386 (23%), Positives = 168/386 (43%), Gaps = 22/386 (5%)

Query: 19  HQISNPRELDILC-----SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
             I +  EL             +T  +G D +A  +H GH   L  +  +Q  GH+ + L
Sbjct: 17  ADIISIDELKEKLIKSEKENKPLTIKLGLDPSAPDIHLGHAVVLRKIKQMQDLGHRAVIL 76

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
           +G  T  IGDP+ + ++R+ +  +++ EN    +      +     K    +  N  WL 
Sbjct: 77  IGDFTGKIGDPTGKSKTRKPLTQEQVIENAMTYQKQILKVLD----KEKTEIRFNSEWLS 132

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDC 193
            +K+ ++L+ + +  +V RML  E  ++R      +   EF Y ++Q YD + L  +   
Sbjct: 133 KLKFEEVLK-LAATTTVARMLEREDFKNRYSNNAPIGIHEFFYPLMQGYDSIVLKAD--- 188

Query: 194 RLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMT 252
            +++GG+DQ  NI+ G  L + +   +  A+  P+L    G  KM K+L   I ++++  
Sbjct: 189 -IELGGTDQTFNILMGRTLQKGMGMEQQIAIFMPILEGLDGVEKMSKSLGNYIGVDEQAE 247

Query: 253 SPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATEITTMV 310
                ++    + D  ++ + +  T      ID +      GK   + K  +A  IT++ 
Sbjct: 248 V---MFKKIMEVPDNLIIKYFELATDEHPDRIDEIKSDLESGKNPRDVKLELAKIITSLY 304

Query: 311 HGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARR 370
           H  EE   A     + F        +P I+I K+ +     +  ++V  G   S  E RR
Sbjct: 305 HSEEETIAAIEYYEQVFKNGCLPSEVPEINIPKEFLKLKE-ISKILVDEGLVPSNKEFRR 363

Query: 371 HLKSNAIKINNSII-SNEKLQIKLQD 395
            ++   ++IN   +   +  +I   D
Sbjct: 364 LVEQGGVQINTEKVLEFDDAKINDND 389


>gi|126696853|ref|YP_001091739.1| tyrosyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9301]
 gi|126543896|gb|ABO18138.1| Tyrosyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9301]
          Length = 412

 Score =  341 bits (875), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 94/387 (24%), Positives = 175/387 (45%), Gaps = 28/387 (7%)

Query: 32  SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESR 91
           +   +   +G D T + +H GH      L   Q  GH  + ++G  T+ IGDP+ ++++R
Sbjct: 38  NNKKLRVKLGIDPTGTDIHLGHSILFKKLRAFQDNGHIAVLIIGDFTAQIGDPTGKNKTR 97

Query: 92  RMMRSQEIQENIEKIKGIF-------SSFIKYGTGKTDALMLNNETWLCSIKYIDLLREI 144
             +  +++++N +              S + + +      +  N  WL  +    ++  +
Sbjct: 98  VQLSEKQVKDNAKTYLTQLGMGKPANESILDFDSKDR-IEIRYNSEWLKGLNLNSIIELM 156

Query: 145 GSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWG 204
           GS  +V++ML+ E    R   +  ++  EF Y +LQ YD V +  +    +++GG+DQ  
Sbjct: 157 GS-ATVSQMLAKEEFNKRYTSQVPIALHEFLYPLLQGYDSVVVQAD----IELGGTDQKF 211

Query: 205 NIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
           NI  G DL    K    F +  P+LT   G  KM K+    + L ++   P + +     
Sbjct: 212 NIAIGRDLQRHFKQEPQFGVLLPILTGLDGIKKMSKSEFNTVGLTED---PLSMYSKLEK 268

Query: 264 IDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAA 323
           + D  + ++ + LT L +S       L+     E ++ +A E+TT+ HG E+A KA +  
Sbjct: 269 VPDNLIPAYFELLTELDLS------FLENSNPRELQRRMALEVTTLFHGDEKALKAQSNC 322

Query: 324 MECF-DMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNS 382
            + F         +P IS+   EV   + L  L+       S++E++R +K   +KI++ 
Sbjct: 323 EKLFLGHKEKVGEIPEISLK--EVVFPVKLFYLLSALKLFKSSSESKRSIKGGGVKIDSE 380

Query: 383 IISNEKLQIKLQDFDSTGNIKLSFGKK 409
            + N  L    ++        L  GKK
Sbjct: 381 KVINPDLVFNSKNDLEGK--ILQIGKK 405


>gi|297182498|gb|ADI18660.1| tyrosyl-tRNA synthetase [uncultured Acidobacteria bacterium
           HF4000_26D02]
          Length = 411

 Score =  341 bits (875), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 93/405 (22%), Positives = 163/405 (40%), Gaps = 29/405 (7%)

Query: 20  QISNPRELDILCS-----QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLM 74
            +    EL          +  +   +G+D TA  LH GH   +  +   Q  GH  I L+
Sbjct: 21  DVLRESELRSKLELSARTKKPLVVKVGFDPTAPDLHLGHTVLIRKMKHFQDLGHTIIFLI 80

Query: 75  GGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCS 134
           G  T +IGDP+ R ++R  +   EI EN E  K    + +         ++  N  WL +
Sbjct: 81  GDFTGLIGDPTGRSKTRPPLSRAEIDENAETYKRQVFALLDPART----VVEFNSRWLGA 136

Query: 135 IKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCR 194
           +   + +R + + ++V +ML     R R  +   ++  EF Y + QAYD V L  +    
Sbjct: 137 LTSEEWIR-LAARYNVAQMLERRDFRQRYDKGLPIAIHEFLYPLAQAYDSVRLKAD---- 191

Query: 195 LQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTS 253
           +++GG+DQ  N+  G D+           +T PLL    G  KM K+    + + +    
Sbjct: 192 VELGGTDQLFNLNVGRDIMPAFGVGPQVVMTIPLLVGLDGVEKMAKSAGNYVGITEP--- 248

Query: 254 PYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAKKIIATEITTMV 310
           P   +    +I D  + S+ + LT L + EI  +              K  +   I T  
Sbjct: 249 PDEMFGKLMSISDVLMWSYYELLTDLTVLEIGALKTRVAAGDLHPKRTKLDLGRRIVTDF 308

Query: 311 HGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARR 370
           H  E A +A       F        +    +     + G  L+ ++V  GFA S + A R
Sbjct: 309 HSAEAAAEAEREFERRFAGKALPSKLDGQVVEVP--ANGARLVAVLVDVGFAESNSAATR 366

Query: 371 HLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            +   +++++   +++   ++    F       L  GK+  I   
Sbjct: 367 LIVQGSVRVDGERVTDRSHRVAAVPF------VLQVGKRRVIRVR 405


>gi|154147934|ref|YP_001406831.1| tyrosyl-tRNA synthetase [Campylobacter hominis ATCC BAA-381]
 gi|153803943|gb|ABS50950.1| tyrosyl-tRNA synthetase [Campylobacter hominis ATCC BAA-381]
          Length = 403

 Score =  341 bits (875), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 114/418 (27%), Positives = 191/418 (45%), Gaps = 36/418 (8%)

Query: 7   DFLSILSE--RGFIHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLML 59
           D  SIL E  RG I +I     ++ L              IG D TAS LH GH   L  
Sbjct: 5   DLNSILKELNRG-ISEIIGIERVEELIKNYYEKGNRFYVKIGMDPTASDLHLGHSVVLKK 63

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG 119
           L +LQ+ G     L+G  T+ IGDP+ + E+R+ +    + +N +  +      +     
Sbjct: 64  LAFLQQHGAIVQFLIGDFTAQIGDPTGKSETRKKLDRNTVLKNAKTYQDQVFKILDKDRT 123

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
                +L N  WL  +    ++ E+ S FSV RML  +   +R K EQ +S  EF Y +L
Sbjct: 124 N----ILFNSEWLNRLGATGMI-ELASTFSVARMLERDDFTNRFKNEQPISISEFLYPLL 178

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASGT-KM 237
           Q YD V +  +    +++GG+DQ  N++ G  L        +   +  PLL    G  KM
Sbjct: 179 QGYDSVCMKSD----IEIGGTDQKFNLLMGRQLQRTYNVGKEQAVMMMPLLVGLDGVNKM 234

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---E 294
            K+L   I + +      + +    +I+D  + S+ + L++  + +I+   KL       
Sbjct: 235 SKSLGNYIGITENAN---DMYAKILSINDELMWSWYELLSSYSLDDINLFKKLVQDGELH 291

Query: 295 INEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLT 354
              AK+ +A +I T  +    A KA       FD    +   P+  I +  +S    ++ 
Sbjct: 292 PKVAKESLAMDIVTKFYDENSALKAKEE----FDKVHVNNEAPS-EIKEFTISSPAWIVK 346

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
            ++    A S+++ARR ++SNA+ ++ + I++E+LQ+       +GN  L  GKK   
Sbjct: 347 ALMSCKLAVSSSDARRLIRSNAVSVDKNKIADEQLQLS------SGNYFLQVGKKKFA 398


>gi|313814308|gb|EFS52022.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL025PA1]
          Length = 344

 Score =  341 bits (875), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 115/349 (32%), Positives = 175/349 (50%), Gaps = 19/349 (5%)

Query: 80  IIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYID 139
           +IGDP      R +   +   E +E IK   S F+ + +G     M+NN  W   +  ID
Sbjct: 1   MIGDPRP-TAERTLKTKELTAEYVESIKTQISPFLDF-SGSNPVTMVNNLDWFGDMTAID 58

Query: 140 LLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGG 199
            LR++G  F VN+ML  +SV  R+  EQ +SF EF+Y ILQ YD++ L + Y C LQ G 
Sbjct: 59  FLRDLGKHFRVNQMLKKDSVSVRMTSEQGISFTEFSYQILQGYDYLYLHRKYGCSLQTGA 118

Query: 200 SDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQ 259
            DQWGNI  G DL  RL    +  LT+PL+TTA+G K GK+   AIWL+  + SPY F+Q
Sbjct: 119 LDQWGNIAVGADLIRRLDGDIVHGLTTPLITTANGEKFGKSEGNAIWLDSTLCSPYKFYQ 178

Query: 260 YWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEITTMVHGREEAE 317
           +W N DD+ + ++ +  T +   EI+    + ++      A+  +A  +T  VHG  E +
Sbjct: 179 FWLNSDDSVIGNYLRVFTEISREEIEDLEDSTIREPHKRRAQVALAKYMTQFVHGDSELQ 238

Query: 318 KAATAAMECFDM-----------SIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
            A   +   F             S  +  +P+  +     + G  L   +VK G A S N
Sbjct: 239 TALAVSAAVFGTADPRGLSPAAVSQMADTLPSAKLD----TTGYDLAPNLVKVGLAKSNN 294

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           EARR +  NAI +N   + +   +++++D        +  G+K      
Sbjct: 295 EARRLIGDNAITVNGIGVKDPYAKLEMRDQLGGIGWLVRRGRKTLGFIR 343


>gi|83769101|dbj|BAE59238.1| unnamed protein product [Aspergillus oryzae]
          Length = 489

 Score =  341 bits (874), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 121/462 (26%), Positives = 201/462 (43%), Gaps = 85/462 (18%)

Query: 39  YIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQE 98
           Y G D TA SLH GH+   M+L W    G     ++GG TS +GDP+ R + R  + S  
Sbjct: 2   YAGVDPTAPSLHVGHMLPFMVLAWGYVWGLPVTWVLGGATSRVGDPTGRLKGREQVHSSV 61

Query: 99  IQENIEKIKGIFSSF--------IKYGTGKTDAL---MLNNETWLCSIKYIDLLREIGSF 147
            + N+  +                ++G  K  A    ++NN TW   + +I++LR++G+ 
Sbjct: 62  RKANMASMHMQLKKLGASIEQYGKRHGYEKKWAWKRSLVNNNTWWNKVPFIEVLRDLGAH 121

Query: 148 FSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNII 207
             +  ML  E+V++RL +   +SF EF+Y +LQA+D+  L K    ++Q+GG+DQ+GNI+
Sbjct: 122 MRLGPMLGRETVKNRLSKGDGMSFSEFSYPLLQAWDWWVLFKK-GVQVQVGGTDQYGNIL 180

Query: 208 CGIDLGERLKTPKL---------------FALTSPLLTTASGTKMGKTLSGAIWLNKEMT 252
            G+D  + +                      LT+PLLT  +G K GK+   AIWL+K+MT
Sbjct: 181 FGMDSVKAISKNTAMEQERDPLENDIDNPIGLTTPLLTAPNGEKFGKSAGNAIWLDKDMT 240

Query: 253 SPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIATEITTMV 310
           S +  +Q++    D  V  + K  T LP+ EI ++ + Q K+     A+  +A E   ++
Sbjct: 241 STFELYQFFVRTPDDVVERYLKMFTFLPLPEIAKLMEEQNKDPSKRVAQHALAAEFVELI 300

Query: 311 HGREEAEKAATAAMECFDMSIHS------------------------------------- 333
           HG++EA+  A    + F     +                                     
Sbjct: 301 HGKQEADAVALQHRQLFRSRSSTAEPTPLQKNSSPPAGHAQSPTSGFVNPQSGNQYAPQT 360

Query: 334 --QHMPTISISKDE-VSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISN---- 386
              +MP+I ++  E +  G     ++  AG  +S  E  R + +    +  S   +    
Sbjct: 361 NFSNMPSIQVTLPESLVYGQNFHKILWSAGLVSSKGEGHRIVTNKGAYV-GSRPGDSGPM 419

Query: 387 -EKLQIKL---------QDFDSTGNIK-LSFGKKNHIICHLC 417
            + L             +DF   GNI  L  GK       + 
Sbjct: 420 SDDLAFTPILTWPAEKTKDFIVDGNILFLKLGKWKFKTVKIV 461


>gi|221311812|ref|ZP_03593659.1| tyrosyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           168]
 gi|221316138|ref|ZP_03597943.1| tyrosyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           NCIB 3610]
 gi|221321049|ref|ZP_03602343.1| tyrosyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           JH642]
 gi|221325334|ref|ZP_03606628.1| tyrosyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           SMY]
 gi|40242|emb|CAA36724.1| tyrosine tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           168]
          Length = 412

 Score =  341 bits (874), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 91/406 (22%), Positives = 182/406 (44%), Gaps = 29/406 (7%)

Query: 19  HQISNPRELDILCSQG-----VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           H++  P EL     +       +   +G D +A  +H GH   L  L   Q+ GH    L
Sbjct: 27  HEVIPPEELKAKLVKSISTGTPLKIKLGLDPSAPDVHLGHTVVLNKLRQFQENGHIVQLL 86

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
           +G  T  IGDP+ +  +R+ +  +E+Q N +     F   +          +  N  WL 
Sbjct: 87  IGDFTGKIGDPTGKSAARKQLTDEEVQHNAKTYFEQFGKVLD----PEKVELHYNSKWLK 142

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDC 193
           ++   D++ E+    +V R++  +    R+  ++ +S  EF Y ++Q YD V L  +   
Sbjct: 143 TLNLEDVI-ELAGKITVARLMERDDFEERIAMQKPISLHEFFYPLMQGYDSVVLESD--- 198

Query: 194 RLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMT 252
            +++GG+DQ  N++ G    ER    K   +  PLL    G  KM K+    I +N+   
Sbjct: 199 -IELGGTDQHFNVLMGRHFQERYNKEKQVVILMPLLEGLDGVEKMSKSKHNYIGINE--- 254

Query: 253 SPYNFWQYWRNIDDADVVSFAKRLTTLPMSE---IDRMAKLQGKEINEAKKIIATEITTM 309
            P + +    ++ D+ +  +    T L + E   + +  +       +AK ++A  I  M
Sbjct: 255 HPNDMYGKTMSLPDSLMKKYIHLATDLELEEKKQLVKDLETGAVHPRDAKMLLARTIVRM 314

Query: 310 VHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEAR 369
            HG + AE A  +    F  +   + +P ++       + + ++ L+VK    +S +EAR
Sbjct: 315 YHGEKAAEAAEHSFKTVFQENSLPEDIPAVNWKG---EKTIAMIDLLVKLKLLSSKSEAR 371

Query: 370 RHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           R +++  ++I+   +++   + ++++     N+ +  GK+  +   
Sbjct: 372 RMIQNGGVRIDGEKVTDVHAKAEIRE-----NMIIQVGKRKFLKLQ 412


>gi|239611023|gb|EEQ88010.1| tyrosyl-tRNA synthetase [Ajellomyces dermatitidis ER-3]
          Length = 592

 Score =  341 bits (874), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 117/480 (24%), Positives = 210/480 (43%), Gaps = 68/480 (14%)

Query: 5   KSDFLSILSERGFIHQIS-NPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           +  FL ++ ERG ++Q+  +   L+ + ++  V  Y G D TA SLH GH+   M+L W 
Sbjct: 76  RKSFLELMEERGLVNQVIGDRDALNKMWTERRVGVYAGVDPTAPSLHVGHMLPFMVLAWA 135

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSF--------IK 115
              G + + L+GG T  +GDP+ R   R  M +   +EN+  +                K
Sbjct: 136 YVHGIRTVFLLGGSTGQVGDPTDRLAPRAKMAAVTRKENMANMHLQLKKLGMSIERYAAK 195

Query: 116 YGTGKTDAL---MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFL 172
           +G          ++NN +W     + ++++ +G    +  ML  ++V++RL+  + ++  
Sbjct: 196 HGYESEWIWRRAIVNNNSWWLKEPFFEVMKTMGEAVRLGPMLGRDTVKNRLQSGKGMALS 255

Query: 173 EFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP------------- 219
           EF Y +LQA+D+ +L +  +  +Q+GGSDQ GNI  G+D  + L                
Sbjct: 256 EFVYPLLQAWDWWQLIQQQNILVQVGGSDQAGNIQFGMDATKPLMKANDEYWRKHAPRDE 315

Query: 220 -----KLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAK 274
                +    T+PLLTTASG K GK+   A+WL+++MTS ++ +Q++  + D +V  + K
Sbjct: 316 DRKLLEPMGFTTPLLTTASGQKFGKSAGNAVWLDQDMTSSFDLYQFFLRVTDENVEQYLK 375

Query: 275 RLTTLPMSEIDRMAKLQ--GKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIH 332
             T LP+  I  + +          A+  +A+E   ++ G  EA +A       F     
Sbjct: 376 YFTFLPIPAIKELMEQHMQDPSKRIAQHKLASEFVELIRGPAEAAQAEKDHRSIFGGKTP 435

Query: 333 SQHM---------------------PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRH 371
           +                        P I++ +  +  G     ++  AG A S  EA R 
Sbjct: 436 TSDELTPRPKRDINLSETSPFNAPSPHITLPRS-LVVGQFFHKVLWSAGMAPSKAEAFRL 494

Query: 372 LKSNAIKI----NNSIISNEKLQI----------KLQDFDSTGNIKLSFGKKNHIICHLC 417
           + +N   +    +++ I ++KL              +       + L  GK    I  + 
Sbjct: 495 VVNNGAAVASRSDSNAIMDDKLSYVPIKTWDKDMTEKFIIDDSLMILKVGKWKVKIIKIV 554


>gi|149178799|ref|ZP_01857380.1| tyrosyl-tRNA synthetase [Planctomyces maris DSM 8797]
 gi|148842340|gb|EDL56722.1| tyrosyl-tRNA synthetase [Planctomyces maris DSM 8797]
          Length = 407

 Score =  341 bits (874), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 99/416 (23%), Positives = 186/416 (44%), Gaps = 28/416 (6%)

Query: 9   LSILSERGFIHQISNPRELDILC-----SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           L+IL  RG + +I   +EL         +   +    G D T   LH GH   +  +   
Sbjct: 10  LAILR-RG-VEKIVPEQELAEKLKWSRETGTPLRVKYGIDPTGIDLHLGHTVPMRKMRQF 67

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q+ GH+ + ++G  T+++GDPS RDE+R  + +++++ N           I       +A
Sbjct: 68  QELGHQAVIIIGNYTALVGDPSGRDETRARLTAEQVEANAVDYLNQVGKVIDL----ENA 123

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            ++ N  W   + +  +L E+ S  +V ++L+ +    R + E ++   E  Y I+QA+D
Sbjct: 124 EVVRNGDWFSKMNFAAIL-ELCSKVTVAQLLTRDDFSKRYREEAAIYLHECLYPIMQAWD 182

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLS 242
            VE+  +    +++GG++Q  + +   DL +     +  ++ SP+L    G  +MGK+L 
Sbjct: 183 SVEIKAD----IELGGTEQLYSFMLARDLQKDQGLRQQVSVMSPILVGTDGVRRMGKSLG 238

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKII 302
             I +++   SPY   + +  + D  +  F + LT  P+ E+     +      EAK  +
Sbjct: 239 NYIGISE---SPYEMMKKFMQLSDDSMQMFYELLTDFPLDEV---QTILAGHPKEAKVKL 292

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG--MGLLTLIVKAG 360
           A  I    H    AE++A             + +P   IS+ E++    +    L+ + G
Sbjct: 293 AKTIIAEYHDTAAAEESADRWQREIGSGGLPEDIPVAKISRSELNEDGTLPAANLLKQLG 352

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
              ST++ARR ++    K+    +   K++   Q       + L  GKK      L
Sbjct: 353 LCASTSDARRSIQQGGAKMGEEKV---KIETHDQAIAVESGMLLWVGKKRFCQVEL 405


>gi|261206034|ref|XP_002627754.1| tyrosyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081]
 gi|239592813|gb|EEQ75394.1| tyrosyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081]
          Length = 592

 Score =  341 bits (874), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 117/480 (24%), Positives = 210/480 (43%), Gaps = 68/480 (14%)

Query: 5   KSDFLSILSERGFIHQIS-NPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           +  FL ++ ERG ++Q+  +   L+ + ++  V  Y G D TA SLH GH+   M+L W 
Sbjct: 76  RKSFLELMEERGLVNQVIGDRDALNKMWTERRVGVYAGVDPTAPSLHVGHMLPFMVLAWA 135

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSF--------IK 115
              G + + L+GG T  +GDP+ R   R  M +   +EN+  +                K
Sbjct: 136 YVHGIRTVFLLGGSTGQVGDPTDRLAPRAKMAAVTRKENMANMHLQLKKLGMSIERYAAK 195

Query: 116 YGTGKTDAL---MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFL 172
           +G          ++NN +W     + ++++ +G    +  ML  ++V++RL+  + ++  
Sbjct: 196 HGYESEWIWRRAIVNNNSWWLKEPFFEVMKTMGEAVRLGPMLGRDTVKNRLQSGKGMALS 255

Query: 173 EFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP------------- 219
           EF Y +LQA+D+ +L +  +  +Q+GGSDQ GNI  G+D  + L                
Sbjct: 256 EFVYPLLQAWDWWQLIQQQNILVQVGGSDQAGNIQFGMDATKPLMKANDEYWRKHAPRDE 315

Query: 220 -----KLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAK 274
                +    T+PLLTTASG K GK+   A+WL+++MTS ++ +Q++  + D +V  + K
Sbjct: 316 DRKLLEPMGFTTPLLTTASGQKFGKSAGNAVWLDQDMTSSFDLYQFFLRVTDENVEQYLK 375

Query: 275 RLTTLPMSEIDRMAKLQ--GKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIH 332
             T LP+  I  + +          A+  +A+E   ++ G  EA +A       F     
Sbjct: 376 YFTFLPIPAIKELMEQHMQDPSKRIAQHKLASEFVELIRGPAEAAQAEKDHRSIFGGKTP 435

Query: 333 SQHM---------------------PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRH 371
           +                        P I++ +  +  G     ++  AG A S  EA R 
Sbjct: 436 TSDELTSRPKRDINLSETSPFNAPSPHITLPRS-LVVGQFFHKVLWSAGMAPSKAEAFRL 494

Query: 372 LKSNAIKI----NNSIISNEKLQI----------KLQDFDSTGNIKLSFGKKNHIICHLC 417
           + +N   +    +++ I ++KL              +       + L  GK    I  + 
Sbjct: 495 VVNNGAAVASRSDSNAIMDDKLSYVPIKTWDKDMTEKFIIDDSLMILKVGKWKVKIIKIV 554


>gi|269215911|ref|ZP_06159765.1| tyrosine--tRNA ligase [Slackia exigua ATCC 700122]
 gi|269130170|gb|EEZ61248.1| tyrosine--tRNA ligase [Slackia exigua ATCC 700122]
          Length = 405

 Score =  340 bits (873), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 100/393 (25%), Positives = 167/393 (42%), Gaps = 20/393 (5%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSF 86
           L+ L     +   +G D TA  +H GH   L  L   Q  GH+   ++G GT++IGDPS 
Sbjct: 27  LEKLKKGVSLNIKLGVDPTAPDIHLGHAVPLRKLRQFQDLGHRVTLIIGDGTALIGDPSG 86

Query: 87  RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGS 146
           R+ +R  +  ++I EN           +          +  N  W+ S++  DLL+ + S
Sbjct: 87  RNATRPQLSPEKIAENARTYVDQAFKILDPDRTA----LRYNSEWILSLEMADLLKLL-S 141

Query: 147 FFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNI 206
            F+V R+L  +    R    + ++  EF Y ++QAYD V +       +++GGSDQ  N+
Sbjct: 142 NFTVARILERDDFHKRYTEGRPIALHEFMYPVMQAYDSVVI----GADVEIGGSDQLFNL 197

Query: 207 ICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYWRNID 265
           + G +L E++      ALT PLL    G  KM K+    I L  E   P + +    +I 
Sbjct: 198 LAGRELMEKMGMEPQVALTLPLLEGTDGVQKMSKSYGNYIGLTDE---PNDMFGKVMSIP 254

Query: 266 DADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAKKIIATEITTMVHGREEAEKAATA 322
           D  +V + +  +T  +  ID + +         N  K+ +   I    +  E A  A   
Sbjct: 255 DELMVKYYQLASTEDVDAIDGIERGLAAGELHPNAVKRALGRNIVAAYYDAEAARAAEAD 314

Query: 323 AMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTNEARRHLKSNAIKINN 381
               F      +  P + +S +    G +    L+V+A  A S +EARR +    +KI  
Sbjct: 315 FDLKFKKHGFPEDAPVVEVSLEPNEEGTVYFAKLLVEAKAAGSVSEARRLIDGGGVKIGG 374

Query: 382 SIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
             ++ +   +            +  GKK     
Sbjct: 375 VALAPKSYSLDPSLLAHAE---IQVGKKKFFRL 404


>gi|16080897|ref|NP_391725.1| tyrosyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           168]
 gi|239938718|sp|P25151|SYY2_BACSU RecName: Full=Tyrosyl-tRNA synthetase 2; AltName:
           Full=Tyrosine--tRNA ligase 2; Short=TyrRS 2
 gi|413933|emb|CAA51565.1| ipa-9r [Bacillus subtilis subsp. subtilis str. 168]
 gi|2636381|emb|CAB15872.1| tyrosyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           168]
          Length = 413

 Score =  340 bits (873), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 91/406 (22%), Positives = 182/406 (44%), Gaps = 29/406 (7%)

Query: 19  HQISNPRELDILCSQG-----VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           H++  P EL     +       +   +G D +A  +H GH   L  L   Q+ GH    L
Sbjct: 28  HEVIPPEELKAKLVKSISTGTPLKIKLGLDPSAPDVHLGHTVVLNKLRQFQENGHIVQLL 87

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
           +G  T  IGDP+ +  +R+ +  +E+Q N +     F   +          +  N  WL 
Sbjct: 88  IGDFTGKIGDPTGKSAARKQLTDEEVQHNAKTYFEQFGKVLD----PEKVELHYNSKWLK 143

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDC 193
           ++   D++ E+    +V R++  +    R+  ++ +S  EF Y ++Q YD V L  +   
Sbjct: 144 TLNLEDVI-ELAGKITVARLMERDDFEERIAMQKPISLHEFFYPLMQGYDSVVLESD--- 199

Query: 194 RLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMT 252
            +++GG+DQ  N++ G    ER    K   +  PLL    G  KM K+    I +N+   
Sbjct: 200 -IELGGTDQHFNVLMGRHFQERYNKEKQVVILMPLLEGLDGVEKMSKSKHNYIGINE--- 255

Query: 253 SPYNFWQYWRNIDDADVVSFAKRLTTLPMSE---IDRMAKLQGKEINEAKKIIATEITTM 309
            P + +    ++ D+ +  +    T L + E   + +  +       +AK ++A  I  M
Sbjct: 256 HPNDMYGKTMSLPDSLMKKYIHLATDLELEEKKQLVKDLETGAVHPRDAKMLLARTIVRM 315

Query: 310 VHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEAR 369
            HG + AE A  +    F  +   + +P ++       + + ++ L+VK    +S +EAR
Sbjct: 316 YHGEKAAEAAEHSFKTVFQENSLPEDIPAVNWKG---EKTIAMIDLLVKLKLLSSKSEAR 372

Query: 370 RHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           R +++  ++I+   +++   + ++++     N+ +  GK+  +   
Sbjct: 373 RMIQNGGVRIDGEKVTDVHAKAEIRE-----NMIIQVGKRKFLKLQ 413


>gi|302871481|ref|YP_003840117.1| tyrosyl-tRNA synthetase [Caldicellulosiruptor obsidiansis OB47]
 gi|302574340|gb|ADL42131.1| tyrosyl-tRNA synthetase [Caldicellulosiruptor obsidiansis OB47]
          Length = 396

 Score =  340 bits (873), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 102/393 (25%), Positives = 181/393 (46%), Gaps = 28/393 (7%)

Query: 29  ILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRD 88
            L     +   +G D     +H GH   L  L  LQ  GH  I ++G  T++IGDP+ + 
Sbjct: 26  KLKQDRPLNIKLGLDPNVPDVHLGHAVVLRKLKQLQDLGHNIILIIGDFTAMIGDPTGKS 85

Query: 89  ESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFF 148
           E+R+ +  +E+Q+N E  K      +          +  N  WL  + ++D++  + S +
Sbjct: 86  ETRKQLTKEEVQKNAEPFKQQVLKILD----PQKTTIRYNSEWLEPMNFLDVI-NLASKY 140

Query: 149 SVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIIC 208
           +V RML  E+ R R+++   LS  EF Y ++Q YD V +    +  +++G ++Q  NI+ 
Sbjct: 141 TVARMLERETFRQRMEKNLPLSIHEFFYPLMQGYDSVVI----EADVELGATEQKFNILM 196

Query: 209 GIDLGERLKTPK-LFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDD 266
           G  L +         AL  P+L    G  KM K+L   I +N+    P   +    +I D
Sbjct: 197 GRTLQKEYGCKTIQVALLMPILVGTDGVNKMSKSLGNYIGINE---PPNVMYGKVMSIPD 253

Query: 267 ADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAKKIIATEITTMVHGREEAEKAATAA 323
             ++S+ +  T +   EI+ + +   +      +AK  +A EI  + HG E A+KA    
Sbjct: 254 EVMISYYELTTDVEPEEIEEIRRKLEEGTLHPRDAKMRLAREIVKLYHGEEAAKKAEEEF 313

Query: 324 MECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSI 383
           ++ F       ++P + +   +V     L   +V+    +ST+E  R +KS A+K+N   
Sbjct: 314 IKVFQKKDIPDNIPEVELQSSKV----YLPRFMVENKLCSSTSEGMRLIKSGAVKLNGEK 369

Query: 384 ISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           I++  ++ +  D        L  GK   +   L
Sbjct: 370 INDLDIEFQNGD-------VLQVGKLKFVKIKL 395


>gi|284931537|gb|ADC31475.1| tyrosyl-tRNA synthetase [Mycoplasma gallisepticum str. F]
          Length = 415

 Score =  340 bits (873), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 127/426 (29%), Positives = 217/426 (50%), Gaps = 26/426 (6%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           DF+S L +R  I QISN  +L +         Y+G+D +  SLH G+L  +++L +L+K 
Sbjct: 2   DFISELKKRNIIKQISNEEKLALALKNQK-GVYVGFDPSGESLHLGNLIPIIVLRYLKKV 60

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           G K  +++GG T +IGDPS +   R++   ++I  N  KIK     +       T A ++
Sbjct: 61  GFKTYAILGGATGLIGDPSGKTSERKVQDYEKITANANKIKVQLERY-------TQAKII 113

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  +  ++  ++ LR+ G   ++  +L  E +RSR+  E  +S+ EF+Y I+Q +DF+ 
Sbjct: 114 NNIDFYQNMNLLNFLRDTGKLINIGYLLDKEFIRSRI--ENGISYAEFSYNIIQGHDFLH 171

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK----LFALTSPLLTTASGTKMGKTLS 242
           L + YD ++Q GGSDQWGNI  GIDL +R    +    L  LT  LL   +G K GK+  
Sbjct: 172 LYEQYDVQVQCGGSDQWGNITTGIDLIKRKYGEEKTPYLCGLTFNLLLNPNGNKFGKSEQ 231

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFA-KRLTTLPMSEIDR--MAKLQGKEINEAK 299
           GA++L++ +T PY  WQY  N DD  ++    + +    + ++     A L  K+   A+
Sbjct: 232 GALYLDENLTHPYLIWQYIYNQDDQFIIDLIHRYVLDQSLEQLQELIEAHLANKKTRIAQ 291

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFD-----MSIHSQHMPTISISKDEVSRGMG--L 352
           K +A  +   +H +E  +         FD     +S   + +   S  K E+ R     +
Sbjct: 292 KFLADYLVKFIHSQEHLDTVHKMNKALFDNQLDQLSDQEKLVVFASFDKVELDRNQSFMV 351

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           +  +++A  A S    R  +   +I+I++  I++ + Q+ ++         +  GKKN+ 
Sbjct: 352 IDFLLQAKVADSKRILRELIAQGSIQIDDLKITDPQAQLNVR--KDQQLTVIKKGKKNYF 409

Query: 413 ICHLCG 418
           I    G
Sbjct: 410 IVVWKG 415


>gi|321313406|ref|YP_004205693.1| tyrosyl-tRNA synthetase [Bacillus subtilis BSn5]
 gi|320019680|gb|ADV94666.1| tyrosyl-tRNA synthetase [Bacillus subtilis BSn5]
          Length = 412

 Score =  340 bits (872), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 92/406 (22%), Positives = 182/406 (44%), Gaps = 29/406 (7%)

Query: 19  HQISNPRELDILCSQG-----VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           H++  P EL     +       +   +G D +A  +H GH   L  L   Q+ GH    L
Sbjct: 27  HEVIPPEELKAKLVKSISTGTPLKIKLGLDPSAPDVHLGHTVVLNKLRQFQENGHIVQLL 86

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
           +G  T  IGDP+ +  +R+ +  +E+Q N +     F   +          +  N  WL 
Sbjct: 87  IGDFTGKIGDPTGKSAARKQLTDEEVQHNAKTYFEQFGKVLD----PEKVELHYNSKWLK 142

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDC 193
           ++   D++ E+    +V R++  +    R+  ++ +S  EF Y ++Q YD V L  +   
Sbjct: 143 TLNLEDVI-ELAGKITVARLMERDDFEERIAMQKPISLHEFFYPLMQGYDSVVLESD--- 198

Query: 194 RLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMT 252
            +++GG+DQ  NI+ G    ER    K   +  PLL    G  KM K+    I +N+   
Sbjct: 199 -IELGGTDQHFNILMGRHFQERYNKEKQVVILMPLLEGLDGVEKMSKSKHNYIGINE--- 254

Query: 253 SPYNFWQYWRNIDDADVVSFAKRLTTLPMSE---IDRMAKLQGKEINEAKKIIATEITTM 309
            P + +    ++ D+ +  +    T L + E   + +  +       +AK ++A  I  +
Sbjct: 255 HPNDMYGKTMSLPDSLMKKYIHLATDLELEEKKQLVKDLETGAVHPRDAKMLLAKTIVRI 314

Query: 310 VHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEAR 369
            HG + AE A  +    F  +   + +P ++       + + ++ L+VK    +S +EAR
Sbjct: 315 YHGEKAAEAAEHSFKTVFQENSLPEDIPAVNWKG---EKTIAMIDLLVKLKLLSSKSEAR 371

Query: 370 RHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           R +++  ++I+   I++   + ++++     N+ +  GK+  +   
Sbjct: 372 RMIQNGGVRIDGEKITDVHAKAEIRE-----NMIIQVGKRKFLKLQ 412


>gi|260436696|ref|ZP_05790666.1| tyrosyl-tRNA synthetase [Synechococcus sp. WH 8109]
 gi|260414570|gb|EEX07866.1| tyrosyl-tRNA synthetase [Synechococcus sp. WH 8109]
          Length = 400

 Score =  340 bits (872), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 92/396 (23%), Positives = 160/396 (40%), Gaps = 31/396 (7%)

Query: 32  SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESR 91
               +   +G D T S++H GH      L   Q  GHK + ++G  T+ IGDP+ +  +R
Sbjct: 27  EGRPLRVKLGIDPTGSNIHLGHSILFRKLRAFQDAGHKAVLIIGDFTARIGDPTGKCATR 86

Query: 92  RMMRSQEIQENIEKIKGIFSS-------FIKYGTGKTDALMLNNETWLCSIKYIDLLREI 144
             +  +++  N                  + + T      +  N  WL  +    ++  +
Sbjct: 87  VQLTKEQVAANASTYLRQLGQDQPKETALLDFETP-GRLEVRYNSEWLEGMDLPAVIGLL 145

Query: 145 GSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWG 204
           G   +V +ML+ +    R      ++  EF Y +LQ +D V +  +    +++GG+DQ  
Sbjct: 146 G-TGTVGQMLAKDDFSKRYGSGTPIALHEFLYPLLQGFDSVAVNAD----VELGGTDQKF 200

Query: 205 NIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
           N+  G DL         F L  P+L    G  KM K+L   + L ++   P + +     
Sbjct: 201 NVAMGRDLQRHFNKGTQFGLLLPILVGLDGVQKMSKSLGNVVGLEED---PLSMYSKLEK 257

Query: 264 IDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAA 323
           + DA +  +   LT L ++ +            E +K +A  +T   HG E A+KA + A
Sbjct: 258 VGDAAIDDYVTLLTDLHLTSLPE-------NPREKQKAMALAVTASRHGIEAAQKAQSDA 310

Query: 324 MECFDMSIHSQ-HMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNS 382
                 S  +   +P  S++  EV+       L    G   S++EARR +K  A ++   
Sbjct: 311 ATLVGGSGDAGADVPEASLA--EVNFPAKAFYLFSAVGICASSSEARRQIKGGAARLEGE 368

Query: 383 IISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLCG 418
            I++   +             L  GKK      L G
Sbjct: 369 KITDPNQEFASAAELEGK--VLQLGKKTFR--RLVG 400


>gi|282901396|ref|ZP_06309321.1| Tyrosyl-tRNA synthetase, class Ib [Cylindrospermopsis raciborskii
           CS-505]
 gi|281193675|gb|EFA68647.1| Tyrosyl-tRNA synthetase, class Ib [Cylindrospermopsis raciborskii
           CS-505]
          Length = 398

 Score =  340 bits (872), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 89/395 (22%), Positives = 164/395 (41%), Gaps = 26/395 (6%)

Query: 22  SNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSII 81
           +   E  +L +   +   +G D T + +H GH   +  L   Q  GH  + ++G  T+ I
Sbjct: 26  TESLEKRLLNADHPLRIKLGIDPTGADIHLGHSIPVRKLRAFQDAGHTAVLIIGDFTARI 85

Query: 82  GDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLL 141
           GDP+ + + RR +  +++ +N +         + + T      +  N  WL  +    +L
Sbjct: 86  GDPTGKSDVRRQLTEEDVSQNAQTYLEQVRPILDFDTP-GRLEVHYNSQWLSGLDLAKIL 144

Query: 142 REIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSD 201
            E+ S  +V +ML+ E    R K+E  +   EF Y ++Q +D V +  +    +++GG+D
Sbjct: 145 -ELLSTMTVGQMLAKEGFAERYKKENPIFLHEFLYPLMQGFDSVAIKSD----VELGGTD 199

Query: 202 QWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQY 260
           Q  NI  G DL         F L  P+L    G  KM K+L   + L++    P   +Q 
Sbjct: 200 QKFNIAVGRDLQRHFGLRPQFGLLLPILIGTDGIQKMSKSLGNYVGLSE---HPSQKYQK 256

Query: 261 WRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAA 320
            + + D  +  + +          D           + ++ +A EI    HG  +A +A 
Sbjct: 257 LQGVPDHLLTQYFE-------LLTDLPLDTLPDNPRDRQQFLAWEIVRQYHGEIQANQAQ 309

Query: 321 TAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKIN 380
            AA            +P  S++         L  ++  +G   ST E +R ++   ++++
Sbjct: 310 EAAKS----KGKEGVLPEFSLANIT-QFPAKLAHILSASGLCKSTGEGKRKIQEGGVRLD 364

Query: 381 NSIISNEKLQ-IKLQDFDSTGNIKLSFGKKNHIIC 414
           +  I++  L      D        L  GKKN +  
Sbjct: 365 SEKITDVDLTFFGPGDLSGK---VLQVGKKNFVRI 396


>gi|218960943|ref|YP_001740718.1| tyrosyl-tRNA synthetase [Candidatus Cloacamonas acidaminovorans]
 gi|167729600|emb|CAO80512.1| tyrosyl-tRNA synthetase [Candidatus Cloacamonas acidaminovorans]
          Length = 400

 Score =  340 bits (872), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 106/412 (25%), Positives = 189/412 (45%), Gaps = 30/412 (7%)

Query: 12  LSERGFIHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           L  RG + +I    EL    ++       +    G D T   +H GHL  +  +   Q  
Sbjct: 9   LISRG-VEEIITLEELKAKFAKAEKTGKPLRIKYGIDPTGYDVHLGHLVPIRKMRQFQDL 67

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH  + ++G  T+ IGDP+ RDESR  + +++++ N EK      + +K    K    + 
Sbjct: 68  GHIGVIIIGDFTAQIGDPTGRDESRPPLSAEQVKRNSEKFMEQLYTVLK----KEQTEVR 123

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
               W   +   D+++ +G  F++ + ++ ++ R R ++  +L   E  Y +LQ YD V 
Sbjct: 124 YQSEWFGKMGMSDVIKLLGK-FTLAQFMAHQTFRQRYEQGLALGMHEILYPVLQGYDSVA 182

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAI 245
           +  +    +++G ++Q  NI+CG D+       +  A+ SP+L    G  KMGK+L+  I
Sbjct: 183 VNSD----VELGATEQKFNILCGRDMQSHFGMEEQVAILSPILIGTDGVNKMGKSLNNYI 238

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLP--MSEIDRMAKLQGKEINEAKKIIA 303
            +      P   +    +I D  ++++    TTLP    E  +     G      KK +A
Sbjct: 239 AV---FDPPTEKYGKVMSIPDNIILNYFYYATTLPEEEIEKIKKELESGTNPMLIKKRLA 295

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
            EI T+ H  EEA++A  A  + F +      +P   +SK        L  L+V +G  +
Sbjct: 296 REIVTLYHSAEEAKEAEYAFEKQFSLREVPNDIPEFVVSK----NSCKLSNLLVDSGICS 351

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +  EA+R ++  A+ +N   I+     + L+D D      +  GK+N+I   
Sbjct: 352 TNGEAKRLIQGGAVSLNGEKITAFDAVVNLKDGD-----IIRAGKRNYIKIK 398


>gi|148242904|ref|YP_001228061.1| tyrosyl-tRNA synthetase [Synechococcus sp. RCC307]
 gi|147851214|emb|CAK28708.1| Tyrosyl-tRNA synthetase [Synechococcus sp. RCC307]
          Length = 415

 Score =  339 bits (871), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 88/389 (22%), Positives = 159/389 (40%), Gaps = 29/389 (7%)

Query: 32  SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESR 91
               +   +G D T S++H GH      L   Q  GH  + ++G  T+ IGDP+ +  +R
Sbjct: 42  EGRPLRIKLGIDPTGSNIHLGHSILFRKLRAFQDAGHTAVLIIGDFTARIGDPTGKSATR 101

Query: 92  RMMRSQEIQENIEKIKGIFSS-------FIKYGTGKTDALMLNNETWLCSIKYIDLLREI 144
             +  +E++ N                  + + T      +  N  WL  ++   ++  +
Sbjct: 102 VQLTVEEVEANAATYLAQLGQGQPKEKALLDFETP-GRLEVRRNSEWLADLELPQVIGLL 160

Query: 145 GSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWG 204
           G   +V +ML+ E    R      ++  EF Y +LQ YD V +  +    +++GG+DQ  
Sbjct: 161 G-TATVGQMLAKEDFAKRYGSGTPIALHEFLYPLLQGYDSVAVDAD----VELGGTDQKF 215

Query: 205 NIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
           N+  G DL         F L  P+L    G  KM K+L   + L ++   P + +     
Sbjct: 216 NVAMGRDLQRHFNQRTQFGLLLPILVGLDGVQKMSKSLGNTVGLEED---PLSMYSKLEK 272

Query: 264 IDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAA 323
           + DA +  +   LT L ++ + +          + +K +A  +T   HG E A KA + A
Sbjct: 273 VGDAAIDDYITLLTDLDLASLPQ-------NPRDKQKAMALAVTASRHGLEAASKAQSDA 325

Query: 324 MECFDM-SIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNS 382
                     +  +P  S++  +V+       L+   G   S++EARR +K  A ++   
Sbjct: 326 ATLVGGVGDAAADVPEASLA--QVNFPAKAFYLLSAVGICASSSEARRQIKGGAARLEGE 383

Query: 383 IISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
            +++   +             L  GKK  
Sbjct: 384 KLTDPNQEFASAAELEGK--VLQLGKKTF 410


>gi|294660357|ref|NP_853071.2| tyrosyl-tRNA synthetase [Mycoplasma gallisepticum str. R(low)]
 gi|298286870|sp|Q7NBH9|SYY_MYCGA RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|284812014|gb|AAP56639.2| tyrosyl-tRNA synthetase [Mycoplasma gallisepticum str. R(low)]
 gi|284930549|gb|ADC30488.1| tyrosyl-tRNA synthetase [Mycoplasma gallisepticum str. R(high)]
          Length = 415

 Score =  339 bits (871), Expect = 4e-91,   Method: Composition-based stats.
 Identities = 126/426 (29%), Positives = 217/426 (50%), Gaps = 26/426 (6%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           DF+S L +R  I QISN  +L +         Y+G+D +  SLH G+L  +++L +L+K 
Sbjct: 2   DFISELKKRNIIKQISNEEKLALALKNQK-GVYVGFDPSGESLHLGNLIPIIVLRYLKKV 60

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           G K  +++GG T +IGDPS +   R++   ++I  N  KIK     +       T A ++
Sbjct: 61  GFKTYAILGGATGLIGDPSGKTSERKVQDYEKITANANKIKVQLERY-------TQAKII 113

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  +  ++  ++ LR+ G   ++  +L  E +RSR+  E  +S+ EF+Y I+Q +DF+ 
Sbjct: 114 NNIDFYQNMNLLNFLRDTGKLINIGYLLDKEFIRSRI--ENGISYAEFSYNIIQGHDFLH 171

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK----LFALTSPLLTTASGTKMGKTLS 242
           L + YD ++Q GGSDQWGNI  GID+ +R    +    L  LT  LL   +G K GK+  
Sbjct: 172 LYEQYDVQVQCGGSDQWGNITTGIDMIKRKYGEEKTPYLCGLTFNLLLNPNGNKFGKSEQ 231

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFA-KRLTTLPMSEIDR--MAKLQGKEINEAK 299
           GA++L++ +T PY  WQY  N DD  ++    + +    + ++     A L  K+   A+
Sbjct: 232 GALYLDENLTHPYLIWQYIYNQDDQFIIDLIHRYVLDQSLEQLQELIEAHLANKKTRIAQ 291

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFD-----MSIHSQHMPTISISKDEVSRGMG--L 352
           K +A  +   +H +E  +         FD     +S   + +   S  K E+ R     +
Sbjct: 292 KFLADYLVKFIHSQEHLDTVHKMNKALFDNQLDQLSDQEKLVVFASFDKVELDRNQSFMV 351

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           +  +++A  A S    R  +   +I+I++  I++ + Q+ ++         +  GKKN+ 
Sbjct: 352 IDFLLQAKVADSKRILRELIAQGSIQIDDLKITDPQAQLNVR--KDQQLTVIKKGKKNYF 409

Query: 413 ICHLCG 418
           I    G
Sbjct: 410 IVVWKG 415


>gi|282897374|ref|ZP_06305376.1| Tyrosyl-tRNA synthetase, class Ib [Raphidiopsis brookii D9]
 gi|281198026|gb|EFA72920.1| Tyrosyl-tRNA synthetase, class Ib [Raphidiopsis brookii D9]
          Length = 398

 Score =  339 bits (870), Expect = 5e-91,   Method: Composition-based stats.
 Identities = 89/395 (22%), Positives = 163/395 (41%), Gaps = 26/395 (6%)

Query: 22  SNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSII 81
           +   E  +L +   +   +G D T + +H GH   +  L   Q  GH  + ++G  T+ I
Sbjct: 26  TESLEKRLLNADHPLRIKLGIDPTGADIHLGHSIPVRKLRAFQDAGHTAVLIIGDFTARI 85

Query: 82  GDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLL 141
           GDP+ + + RR +  +++ +N +         + + T      +  N  WL  +    +L
Sbjct: 86  GDPTGKSDVRRQLTEEDVSQNAQTYLEQVRPILDFDTP-GRLEVHYNSQWLSGLDLAKIL 144

Query: 142 REIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSD 201
            E+ S  +V +ML+ E    R K+E  +   EF Y ++Q +D V +  +    +++GG+D
Sbjct: 145 -ELLSTMTVGQMLAKEGFAERYKKENPIFLHEFLYPLMQGFDSVAIRSD----VELGGTD 199

Query: 202 QWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQY 260
           Q  NI  G DL         F L  P+L    G  KM K+L   + L++    P   +Q 
Sbjct: 200 QKFNIAVGRDLQRHFGLRPQFGLLLPILIGTDGIQKMSKSLGNYVGLSE---HPSQKYQK 256

Query: 261 WRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAA 320
            + + D  +  + +          D           + ++ +A EI    HG  +A +A 
Sbjct: 257 LQGVPDHLLTQYFE-------LLTDLPLDTLPDNPRDRQQFLAWEIVRQYHGEIQANQAQ 309

Query: 321 TAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKIN 380
            AA            +P  S++         L  ++  +G   ST E +R ++   ++++
Sbjct: 310 EAAKS----KGKEGVLPEFSLANIT-QFPTKLAHILSASGLCKSTGEGKRKIQEGGVRLD 364

Query: 381 NSIISNEKLQ-IKLQDFDSTGNIKLSFGKKNHIIC 414
              I++  L      D        L  GKKN +  
Sbjct: 365 GEKIADMDLTFFGPGDLSGK---VLQVGKKNFVRI 396


>gi|189202938|ref|XP_001937805.1| tyrosyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP]
 gi|187984904|gb|EDU50392.1| tyrosyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP]
          Length = 564

 Score =  339 bits (870), Expect = 5e-91,   Method: Composition-based stats.
 Identities = 121/360 (33%), Positives = 185/360 (51%), Gaps = 28/360 (7%)

Query: 2   PAFKSDFLSILSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
              +   LS+L ERGF+  I+  R+ LD L ++  +  Y+G D TA SLH GHL  LM L
Sbjct: 25  TGMQQSMLSLLEERGFVKDIAGGRKTLDWLLTEKRIGVYVGVDPTAPSLHVGHLLPLMAL 84

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG- 119
           +W+   G+  +SL+GGGT  IGDPS R  +R          N+  I     +        
Sbjct: 85  YWMYLHGYYAVSLLGGGTVQIGDPSGRTTARSRQGEDVQSMNVRSINEQLKTLWTNVKCL 144

Query: 120 ----------KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSL 169
                          +LNN  WL  +  ++L+R++GS   +  MLS +SV+ R++  + +
Sbjct: 145 GIKHQYSYNISRKQSILNNRNWLEKLNAVELMRDLGSGMRLGAMLSRDSVKLRMESGEGM 204

Query: 170 SFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGI----DLGERLK-------- 217
           S  EF+Y + QAYD+  + K+   +LQ+GGSDQ+GNII G+     + +           
Sbjct: 205 SISEFSYPLFQAYDWWSMYKDRGVQLQIGGSDQYGNIIAGMGAVSHMQKIHGLNGGAEEE 264

Query: 218 --TPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKR 275
                 + LT+PLLTTASG K GK+   A+WL+ +M  P++ +QY+    DADV  + K 
Sbjct: 265 DPKEAPYGLTTPLLTTASGEKFGKSAGNAVWLDGQMLKPFDLYQYFLRTADADVERYLKL 324

Query: 276 LTTLPMSEIDRMAKLQGKEI--NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS 333
            T LP+  I  +   Q ++     A+  +A EI  + HG  EA+K A A  + F    ++
Sbjct: 325 FTFLPLDSIALLMTSQNRDPSKRIAQHALAQEIVELAHGAAEAKKVAMAHKDAFGQGTNT 384


>gi|297172808|gb|ADI23772.1| tyrosyl-tRNA synthetase [uncultured Oceanospirillales bacterium
           HF4000_43P14]
          Length = 399

 Score =  339 bits (870), Expect = 5e-91,   Method: Composition-based stats.
 Identities = 95/409 (23%), Positives = 173/409 (42%), Gaps = 24/409 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           L  RG   +I    EL    + G  +    G+D TA  LH GH   +  L   Q+ GH  
Sbjct: 10  LLRRGA-DEIIQEDELRERIASGRPLRVKAGFDPTAPDLHLGHTVLINKLRQFQELGHHV 68

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           + L+G  T +IGDP+ +  +R  +  +EI+ N E  K      +     +    ++ N T
Sbjct: 69  MFLIGDFTGMIGDPTGKSATRPPLTPEEIERNAETYKEQVFKILDPEKTE----VVFNST 124

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           W+  +    +++ + S ++V RML  +    R +  Q ++  EF Y ++Q YD V +   
Sbjct: 125 WMNQVGAAGMIK-LASQYTVARMLERDDFDKRYRANQPIAVHEFLYPLVQGYDSVAM--- 180

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNK 249
            +  +++GG+DQ  N++ G  L +         LT P+L    G  KM K+L   + +N 
Sbjct: 181 -EADVELGGTDQKFNLLMGRTLQKAYGQAPQICLTMPILEGLDGVQKMSKSLKNYVGVN- 238

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINEAKKIIATEIT 307
              +P   ++   +I D     + + L+ L    ++       +     EAKK  A E+ 
Sbjct: 239 --DAPGEMYRKLLSIPDDMTWRYYELLSGLSNEALEERKAEAERLGSPQEAKKAFALEMV 296

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
           T  HG   A+ A ++A     +     ++        E    + ++ L+  AG A +   
Sbjct: 297 TRFHGEAAAQAAPSSAGNLTALGAIPDNV-PEVEVVLEEGDEVHVVPLLRLAGLAQNGKA 355

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           A+      A+ ++   ++ E+       F    +  +  GKK      +
Sbjct: 356 AKDVFGRGAVYVDGQQLTEERT------FARGESAVIQAGKKKIARVTI 398


>gi|78184144|ref|YP_376579.1| tyrosyl-tRNA synthetase [Synechococcus sp. CC9902]
 gi|115305826|sp|Q3AZE2|SYY_SYNS9 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|78168438|gb|ABB25535.1| tyrosyl-tRNA synthetase [Synechococcus sp. CC9902]
          Length = 415

 Score =  339 bits (870), Expect = 6e-91,   Method: Composition-based stats.
 Identities = 91/403 (22%), Positives = 154/403 (38%), Gaps = 29/403 (7%)

Query: 18  IHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGG 77
           + Q    R          +   +G D T S++H GH      L   Q  GH  + ++G  
Sbjct: 28  VDQSLAARLAAAEAEGRPLRVKLGIDPTGSNIHLGHSILFRKLRAFQDAGHIAVLIIGDF 87

Query: 78  TSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSS-------FIKYGTGKTDALMLNNET 130
           T+ IGDP+ +  +R  +   ++  N                  + + T      +  N  
Sbjct: 88  TARIGDPTGKSATRVQLSKNDVAVNASTYLRQLGQDQPKETALLDFETP-GRLEVRYNSE 146

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           WL  +    ++  +G   +V +ML+ E   +R      ++  EF Y +LQ YD V +  +
Sbjct: 147 WLEGMDLPAVIGLLG-TGTVGQMLAKEDFSNRYNSGTPIALHEFLYPLLQGYDSVAVNAD 205

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNK 249
               +++GG+DQ  N+  G DL         F L  P+L    G  KM KTL   + L  
Sbjct: 206 ----VELGGTDQKFNVAMGRDLQRHFGRGTQFGLLLPILVGLDGAQKMSKTLGNTVGLED 261

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTM 309
           +   P + +     + D  +  +   LT L +  +            E +K +A  +T  
Sbjct: 262 D---PLSMYSKLEKVGDTAINDYVTLLTDLNVEALPE-------NPREKQKAMALAVTAT 311

Query: 310 VHGREEAEKAATAAMECFDM-SIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
            HG + A KA   A          S  +P  S+    V+       L+   G   S++EA
Sbjct: 312 RHGTDAAAKAQLDAGNLVGGAGDASADVPEASL--LAVNFPAKAFYLMSAVGICASSSEA 369

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           RR +K  A +++   I++   +             L  GKK  
Sbjct: 370 RRQIKGGAARLDGEKITDPNQEFASAAELDGR--VLQLGKKTF 410


>gi|212543425|ref|XP_002151867.1| tyrosyl-tRNA synthetase, mitochondrial precursor (tyrosine--tRNA
           ligase) (tyrrs) [Penicillium marneffei ATCC 18224]
 gi|210066774|gb|EEA20867.1| tyrosyl-tRNA synthetase, mitochondrial precursor (tyrosine--tRNA
           ligase) (tyrrs) [Penicillium marneffei ATCC 18224]
          Length = 636

 Score =  339 bits (869), Expect = 6e-91,   Method: Composition-based stats.
 Identities = 126/497 (25%), Positives = 204/497 (41%), Gaps = 88/497 (17%)

Query: 5   KSDFLSILSERGFIHQISNPREL-DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           +  FL  L ER  ++Q+   REL D + +      Y G D TA SLH GH+  +M+L W 
Sbjct: 85  RKAFLDHLEERELVNQVVGGRELLDKVFTDKRTGLYTGVDPTAPSLHVGHMLPIMVLAWA 144

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSF--------IK 115
              G+    ++GG T+  GDP+ R   R          N+  +                +
Sbjct: 145 FNWGYPVHFILGGATARFGDPTGRLGPRATEHRSVRVANMAAMHMQLKRISASIEDYGRR 204

Query: 116 YGTGKTDAL---MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFL 172
           YG  K  A    + NN  W     ++++LR++G    +  ML  ++V++RL+    +SF 
Sbjct: 205 YGYVKEWAWKRALTNNNVWWNKTPFVEVLRDLGMHMRLGPMLGRDTVKTRLE-GSGMSFA 263

Query: 173 EFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL---------------K 217
           EF+Y ++QA+D+ EL K    ++Q+GG+DQ+GNI+ G+D  + +                
Sbjct: 264 EFSYPLMQAWDWWELFKK-GVQVQVGGADQFGNILFGMDAVKHVAKNTAIEIDRRPVEDD 322

Query: 218 TPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT 277
             K   LT+PLLTT+SG K+GK+   A+WL+K+MTS +  +QY+    D  V  + K  T
Sbjct: 323 VDKPVGLTTPLLTTSSGEKIGKSAGNAVWLDKDMTSTFELYQYFVRTPDDVVEKYLKMFT 382

Query: 278 TLPMSEIDRMAKL--QGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSI---- 331
            LP+ +I  +     Q      A+  +A E   +VHG  EAE AAT   + F        
Sbjct: 383 FLPLEKIAEIMAESTQDPSKRIAQHALAKEFVDIVHGPIEAEAAATQHRQLFRPRSSTSE 442

Query: 332 ----------HSQHM---PTIS------------------------ISKDEVSRGMGLLT 354
                        ++   PT S                        +    ++    L  
Sbjct: 443 PTPPPTQPPNIPANLASNPTYSFMNRGAGNPYAKPLNYKNMESNRVLLPRSLALEQPLAK 502

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL---------------QDFDST 399
           ++  AG  +S +E  R +    + I  S   +                            
Sbjct: 503 VLYNAGLVSSNSEGHRLIVGKGVSI-GSRPGDSGEMSDALSFTPIKTWVPGKNSDFLIDN 561

Query: 400 GNIKLSFGKKNHIICHL 416
             + +  GK    +  L
Sbjct: 562 NLLIVKIGKWKLKLIEL 578


>gi|164687946|ref|ZP_02211974.1| hypothetical protein CLOBAR_01591 [Clostridium bartlettii DSM
           16795]
 gi|164602359|gb|EDQ95824.1| hypothetical protein CLOBAR_01591 [Clostridium bartlettii DSM
           16795]
          Length = 401

 Score =  338 bits (868), Expect = 8e-91,   Method: Composition-based stats.
 Identities = 106/418 (25%), Positives = 185/418 (44%), Gaps = 31/418 (7%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
            K   L I++E   I ++        +     +   +G D +A  +H GH   L  L  L
Sbjct: 11  IKKGTLDIINEEELIKKL-----EKSIKENKPLKIKLGLDPSAPDIHLGHTVVLRKLKQL 65

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q  GH+ I ++G  T  IGDP+ +   R+ +  +E+ +N +  +      +     K   
Sbjct: 66  QDLGHEIIIIIGDFTGKIGDPTGKSRMRKFLSDEEVLQNAKTYEEQVFKILD----KEKT 121

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            +  N  WL  + + D+L+   S  +V RML  E  + R + ++ +   EF Y ++QA+D
Sbjct: 122 TIKFNSEWLSKLTFGDVLKLTAST-TVARMLEREDFKLRFENQRPIYLNEFFYPLMQAFD 180

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLS 242
              +    +  ++ GG+DQ  N++ G +L + +       +  PL+    G  KM KTL 
Sbjct: 181 STAI----EADIEFGGTDQRFNLLSGRNLQKEIGEEPQVVIMMPLIEGLDGKNKMSKTLG 236

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMS---EIDRMAKLQGKEINEAK 299
             I + +   S    +Q    I D  +V +   LT +      E++   K +     + K
Sbjct: 237 NYIGIYESAKSK---YQKVMEIPDELIVKYYTLLTDVDDEIIKEVEAKLKDESVNPRDIK 293

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKA 359
             +A EI ++ H  EE E+A       F M    + + T+++SK++      L++ +V  
Sbjct: 294 MDLAREIVSLYHTEEEVEQAEERFKMIFQMGQKPKDIDTVNVSKEDF----DLISTVVDK 349

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           G  +S +E RR L    IKIN+  I+ EK      D    G I +  GKK  +   + 
Sbjct: 350 GLVSSKSEFRRLLPQGGIKINDKKITMEK------DLPKEGEIVVQVGKKKFMKIIVS 401


>gi|226291534|gb|EEH46962.1| tyrosyl-tRNA synthetase [Paracoccidioides brasiliensis Pb18]
          Length = 612

 Score =  338 bits (868), Expect = 8e-91,   Method: Composition-based stats.
 Identities = 120/500 (24%), Positives = 211/500 (42%), Gaps = 88/500 (17%)

Query: 5   KSDFLSILSERGFIHQIS-NPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           +  FL ++ ERG ++Q+  +   L+ + ++  V  Y+G D TA SLH GH+   M+L W 
Sbjct: 82  RKSFLELMEERGLVNQVVGDRDALNKMWTERRVGVYVGVDPTAPSLHIGHMLPFMVLAWA 141

Query: 64  QKTGHKPISLM----------------GGGTSIIGDPSFRDESRRMMRSQEIQENIEKIK 107
              G + + L+                GG TS IGDP+ R+  R        +EN+  + 
Sbjct: 142 YVHGIRSVFLVSTCCFYALPRYILVQLGGSTSQIGDPTDREAPRAKQARITRKENMVNMH 201

Query: 108 GIFSSF----IKYGTGKTDAL-------MLNNETWLCSIKYIDLLREIGSFFSVNRMLSF 156
                F     +YG     A        ++NN  W     ++++++ +G    +  ML  
Sbjct: 202 LQLRIFGMSIERYGAKHGYAYEPIWRRAIVNNNAWWLKAPFMEVMKTMGESVRLGPMLGR 261

Query: 157 ESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL 216
           ++V++RL+  + +S  EF Y +LQA+D+ +L +  +  +Q+GGSDQ GNI  GID  + L
Sbjct: 262 DTVKNRLQSGKGMSLAEFTYPLLQAWDWWQLIQQQNILVQVGGSDQAGNIQFGIDATKAL 321

Query: 217 KTPKL------------------FALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFW 258
                                     T+PLLTT SG K GKT   A+WL+K+MT  ++ +
Sbjct: 322 MKADQDYWRKHAPNPEDREILEPMGFTTPLLTTPSGEKFGKTAGNAVWLDKDMTPTFDLY 381

Query: 259 QYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIATEITTMVHGREEA 316
           Q++  + D +V  + K  T L +  I ++     ++     A+  +A+E   ++ G  EA
Sbjct: 382 QFFIRVPDENVEQYLKYFTFLSIPTIKKIMVQHMEDPSKRVAQHKLASEFVELMRGPAEA 441

Query: 317 EKAATAAMECFD---MSIHSQHM----------------------PTISISKDEVSRGMG 351
            +A       F        S  +                      P +++ +  +  G  
Sbjct: 442 AQAEKDHRSLFGSLFGGQVSTALEMEARPKRDINLSETSPFRVPSPHVTLPRS-LVVGQF 500

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKI----NNSIISNEKLQI----------KLQDFD 397
              ++  AG A+S  EA R +  N   +    ++  + ++KL              +   
Sbjct: 501 FHKVLWSAGLASSKAEAMRLILQNGAAVASRSDSKAVMDDKLSYVPIKTWNKDETAKFII 560

Query: 398 STGNIKLSFGKKNHIICHLC 417
               + L  GK    I  + 
Sbjct: 561 DDSLLILRIGKWKVKIVKIV 580


>gi|302873370|ref|YP_003842003.1| tyrosyl-tRNA synthetase [Clostridium cellulovorans 743B]
 gi|307688462|ref|ZP_07630908.1| tyrosyl-tRNA synthetase [Clostridium cellulovorans 743B]
 gi|302576227|gb|ADL50239.1| tyrosyl-tRNA synthetase [Clostridium cellulovorans 743B]
          Length = 401

 Score =  338 bits (868), Expect = 9e-91,   Method: Composition-based stats.
 Identities = 90/409 (22%), Positives = 176/409 (43%), Gaps = 31/409 (7%)

Query: 18  IHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPIS 72
           + +I     L     +       +   +G D +A  +H GH   L  +  LQ  GHK I 
Sbjct: 15  VDEIIGLDSLKEKIEKANENGKPLIVKLGLDPSAPDIHLGHTVVLRKMKQLQDLGHKVIV 74

Query: 73  LMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL 132
           ++G  T  IGDP+ + + R+ + ++++ EN    +      +     +    +  N  WL
Sbjct: 75  IIGDFTGKIGDPTGKTKGRKALTTEQVLENARTYETQIFKVLDKDKTE----VRFNSEWL 130

Query: 133 CSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYD 192
             + + + ++ + +  +V RML  E  + R + +  +S  EF Y ++Q YD V +  +  
Sbjct: 131 SQLSFEETIK-LAATMTVARMLEREEFKKRYENQVPISVHEFFYPLMQGYDSVAIHAD-- 187

Query: 193 CRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEM 251
             +++GG+DQ  N++ G  L +         +  PLL    G  KM K+L   I ++++ 
Sbjct: 188 --IELGGTDQRFNVLMGRMLQKEYGQEPQTTIFMPLLEGLDGKEKMSKSLGNYIGIDEKA 245

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMS---EIDRMAKLQGKEINEAKKIIATEITT 308
                 ++    + D  ++ +   +T +      E++   + +     + K  +A EI  
Sbjct: 246 EV---MYEKAMTVPDNLIIKYFNLVTDMHPDKVKELESTLRDEKVNPRDIKMRLAKEIVR 302

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
           + HG +EAEKA    M  F        + T+++S         +  ++V   F  S ++ 
Sbjct: 303 LYHGEKEAEKAEERFMLIFQKGKIPTDIETVNVS----ENNFDIGEILVSEKFVASKSDL 358

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           RR +    +KINN+I+ +      L +      + +  GKK  I   + 
Sbjct: 359 RRLIDQGGVKINNNILKD------LAEIKIEKEMIVQVGKKKFIHISIA 401


>gi|91070372|gb|ABE11286.1| tyrosyl-tRNA synthetase [uncultured Prochlorococcus marinus clone
           HF10-88H9]
          Length = 412

 Score =  338 bits (868), Expect = 9e-91,   Method: Composition-based stats.
 Identities = 97/400 (24%), Positives = 178/400 (44%), Gaps = 28/400 (7%)

Query: 19  HQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGT 78
           +Q  +        +   +   +G D T +++H GH      L   Q  GH  + ++G  T
Sbjct: 25  NQTFSEIIDHAKKNNKKLRVKLGIDPTGTNIHLGHSILFKKLRAFQDNGHIAVLIIGDFT 84

Query: 79  SIIGDPSFRDESRRMMRSQEIQENIEKIKGIF-------SSFIKYGTGKTDALMLNNETW 131
           + IGDP+ ++++R  +  Q++++N +              S + + +      +  N  W
Sbjct: 85  AQIGDPTGKNKTRVQLSEQQVKDNAKTYLTQLGMGKPAIESILDFDSKDR-IEIRYNSEW 143

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L  +    ++  +GS  +V++ML+ E    R   +  +S  EF Y +LQ YD V +  + 
Sbjct: 144 LKGLNLNSIIDLMGSS-TVSQMLAKEEFNKRYTAQVPISLHEFLYPLLQGYDSVVVQSD- 201

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKE 250
              +++GG+DQ  NI  G DL    K    F +  P+LT   G  KM K+    + L ++
Sbjct: 202 ---IELGGTDQKFNIAIGRDLQRHFKQDPQFGVLLPILTGLDGVKKMSKSEFNTVGLTED 258

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMV 310
              P + +     + D  + ++ + LT L +S       L+     E ++ +A E+TT+ 
Sbjct: 259 ---PLSMYSKLEKVPDNIIPTYFELLTELDLS------FLENSNPRELQRRMALEVTTLF 309

Query: 311 HGREEAEKAATAAMECF-DMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEAR 369
           HG EEA KA +   + F         +P IS+   EV   +    L+       S++E++
Sbjct: 310 HGAEEALKAQSNCEKLFLGQKEKVGEIPDISLK--EVVFPVKFFYLLSALKLFKSSSESK 367

Query: 370 RHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
           R +K   +KI++  + N  L    ++        L  GKK
Sbjct: 368 RSIKGGGVKIDSQKVVNPDLVFNSKNDLEGK--ILQIGKK 405


>gi|254526376|ref|ZP_05138428.1| tyrosyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9202]
 gi|221537800|gb|EEE40253.1| tyrosyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9202]
          Length = 412

 Score =  338 bits (868), Expect = 9e-91,   Method: Composition-based stats.
 Identities = 97/399 (24%), Positives = 176/399 (44%), Gaps = 28/399 (7%)

Query: 20  QISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTS 79
           Q  +        +   +   +G D T + +H GH      L   Q  GH  + ++G  T+
Sbjct: 26  QTFSEIIDHAKKNNKKLRVKLGIDPTGTDIHLGHSILFKKLRAFQDNGHIAVLIIGDFTA 85

Query: 80  IIGDPSFRDESRRMMRSQEIQENIEKIKGIF-------SSFIKYGTGKTDALMLNNETWL 132
            IGDP+ ++++R  +  +++++N +              S + +   K    +  N  WL
Sbjct: 86  QIGDPTGKNKTRVQLSEKQVKDNAKTYLAQLGMGKPANKSILDF-DAKDRIEIRYNSEWL 144

Query: 133 CSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYD 192
             +    ++  +GS  +V++ML+ E    R   +  +S  EF Y +LQ YD V +  +  
Sbjct: 145 KGLNLNSIIDLMGS-ATVSQMLAKEEFNKRYTAQVPISLHEFLYPLLQGYDSVVVQSD-- 201

Query: 193 CRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEM 251
             +++GG+DQ  NI  G DL    K    F +  P+LT   G  KM K+    + L ++ 
Sbjct: 202 --IELGGTDQKFNIAIGRDLQRHFKQDPQFGVLLPILTGLDGVKKMSKSEFNTVGLTED- 258

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVH 311
             P + +     + D  + ++ + LT L +S       L+     E ++ +A E+TT+ H
Sbjct: 259 --PLSMYSKLEKVPDNIIPTYFELLTELDLS------FLENSNPRELQRRMAFEVTTLFH 310

Query: 312 GREEAEKAATAAMECF-DMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARR 370
           G EEA KA +   + F         +P IS+   EV   +    L+       S++E++R
Sbjct: 311 GAEEALKAQSNCEKLFLGHKEKVGEIPEISLK--EVVFPVKFFYLLSALKLFKSSSESKR 368

Query: 371 HLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
            +K   +KI++  + N  L    ++        L  GKK
Sbjct: 369 SIKGGGVKIDSQKVINPDLVFNSKNDLEGK--ILQIGKK 405


>gi|182419881|ref|ZP_02951119.1| tyrosyl-tRNA synthetase [Clostridium butyricum 5521]
 gi|237668980|ref|ZP_04528964.1| tyrosine--tRNA ligase [Clostridium butyricum E4 str. BoNT E BL5262]
 gi|182376250|gb|EDT73834.1| tyrosyl-tRNA synthetase [Clostridium butyricum 5521]
 gi|237657328|gb|EEP54884.1| tyrosine--tRNA ligase [Clostridium butyricum E4 str. BoNT E BL5262]
          Length = 416

 Score =  338 bits (867), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 89/400 (22%), Positives = 176/400 (44%), Gaps = 27/400 (6%)

Query: 22  SNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSI 80
           +   +L     +   +   +G D +A  +H GH   L  +  LQ  GHK + ++G  T  
Sbjct: 38  TLKEKLKKSNEENRPLIVKLGLDPSAPDIHLGHTVVLRKMKQLQDLGHKIVIIIGDFTGK 97

Query: 81  IGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDL 140
           IGDP+ + + R+ + ++++ EN +  +      +     K    +  N  WL  + + + 
Sbjct: 98  IGDPTGKAKGRKALSTEQVLENAKTYEKQIFKILD----KEKTDVRFNSEWLSKLSFEET 153

Query: 141 LREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGS 200
           ++ + S  +V RML  E  + R + +  +S  EF Y ++Q YD V L  +    +++GG+
Sbjct: 154 IK-LASTMTVARMLEREDFKKRYESQIPISIHEFFYPLMQGYDSVVLNAD----IELGGT 208

Query: 201 DQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQ 259
           DQ  N++ G  L +         +  PLL    G  KM K+L   I ++++       ++
Sbjct: 209 DQRFNVLMGRMLQKEYGQESQTTIFMPLLEGLDGKEKMSKSLGNYIGIDEDADV---MFE 265

Query: 260 YWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAKKIIATEITTMVHGREEA 316
               I D  ++ +   +T +    I+ + K          + K  +A EIT + +  E+ 
Sbjct: 266 KAMRIPDELIIKYFNLVTDIHPDIIEGIEKELNDGSINPRDIKMRLAREITLLYNNEEKT 325

Query: 317 EKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNA 376
           + A     + F       ++  I ++K      + +  ++V   F  S NE RR      
Sbjct: 326 KSAEERFKKVFQKGQIPDNIEVIKVNK----NNLDISEILVNNNFVKSKNELRRISNQGG 381

Query: 377 IKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +K+N + IS+   +++++D      + +  GKK  +   L
Sbjct: 382 LKVNENKISDLS-KVEIED-----KMIIQIGKKKFVCIEL 415


>gi|294993202|ref|ZP_06798893.1| tyrosyl-tRNA synthetase [Mycobacterium tuberculosis 210]
          Length = 306

 Score =  338 bits (867), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 102/307 (33%), Positives = 170/307 (55%), Gaps = 12/307 (3%)

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
           A++ NN  W  S+  I+ LR+IG  FSVN ML+ +++R RL   + +S+ EF+Y++LQA 
Sbjct: 1   AIVENNLEWTGSLSAIEFLRDIGKHFSVNVMLARDTIRRRLA-GEGISYTEFSYLLLQAN 59

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT-L 241
           D+VEL + + C LQ+GG+DQWGNII G+ L  +     + ALT PL+T A GTK GK+  
Sbjct: 60  DYVELHRRHGCTLQIGGADQWGNIIAGVRLVRQKLGATVHALTVPLVTAADGTKFGKSTG 119

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAK 299
            G++WL+ +MTSPY ++QY+ N  DADV+ + +  T L   E+  + +   Q  +   A+
Sbjct: 120 GGSLWLDPQMTSPYAWYQYFVNTADADVIRYLRWFTFLSADELAELEQATAQRPQQRAAQ 179

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQ--------HMPTISISKDEVSRGMG 351
           + +A+E+T +VHG         A+   F     ++         +   ++++ +     G
Sbjct: 180 RRLASELTVLVHGEAATAAVEHASRALFGRGELARLDEATLAAALRETTVAELKPGSPDG 239

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           ++ L+V +G + S   ARR +    + +NN  + NE+   +  DF     + L  GK++ 
Sbjct: 240 IVDLLVASGLSASKGAARRTIHEGGVSVNNIRVDNEEWVPQSSDFLHGRWLVLRRGKRSI 299

Query: 412 IICHLCG 418
                 G
Sbjct: 300 AGVERIG 306


>gi|317489805|ref|ZP_07948303.1| tRNA synthetase class I [Eggerthella sp. 1_3_56FAA]
 gi|325830069|ref|ZP_08163526.1| tyrosine--tRNA ligase [Eggerthella sp. HGA1]
 gi|316911090|gb|EFV32701.1| tRNA synthetase class I [Eggerthella sp. 1_3_56FAA]
 gi|325487536|gb|EGC89974.1| tyrosine--tRNA ligase [Eggerthella sp. HGA1]
          Length = 403

 Score =  338 bits (867), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 105/405 (25%), Positives = 168/405 (41%), Gaps = 23/405 (5%)

Query: 19  HQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGG 77
            QI     L     +G  +   +G D TA  +H GH   L  L   Q  GH    ++G G
Sbjct: 16  AQIVPESALLEKLKRGTPLNIKLGVDPTAPDIHLGHAVPLRKLRQFQDLGHGVTLIIGDG 75

Query: 78  TSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKY 137
           T++IGDPS R+ +R  + S++I+ N +         +          +  N  WL S+  
Sbjct: 76  TALIGDPSGRNTTRPQLTSEQIKANAQTYVDQAFKILD----PEKTTLRYNSEWLLSLNM 131

Query: 138 IDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQM 197
            DLL+ + S F+V R+L  +    R    Q +S  EF Y ++QAYD V +  +    +++
Sbjct: 132 EDLLK-LASNFTVARILERDDFHKRYTNSQPISLHEFLYPLMQAYDSVVIKAD----VEL 186

Query: 198 GGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYN 256
           GG+DQ  N++ G +L E++       LT PLL    G  KM K+    I L  E   P +
Sbjct: 187 GGTDQLFNLLAGRELMEKMGMEPQVCLTLPLLEGTDGVQKMSKSYGNYIGLTDE---PAD 243

Query: 257 FWQYWRNIDDADVVSFAKRLTTLP---MSEIDRMAKLQGKEINEAKKIIATEITTMVHGR 313
            +    +I D  +V + +  + LP   + EI+R         N+ K+ +A  I    +  
Sbjct: 244 MFGKVMSIPDELMVKYYRLASALPVDQIDEIERGLAADELHPNKVKRALAKNIVAAYYDE 303

Query: 314 EEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTNEARRHL 372
             A+ A       F        +P  +        G + L  L+  A  A S  EARR +
Sbjct: 304 AAAQAAEEQFDLVFKQHAVPDDIPEFAADLTPNDDGTVYLAKLLADASLAASAGEARRLI 363

Query: 373 KSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
               +K+N   +  +   +            L  GK+      L 
Sbjct: 364 DGGGVKVNGEALPAKSYNVDPALLAGA---TLQVGKRKF--VKLV 403


>gi|257790356|ref|YP_003180962.1| tyrosyl-tRNA synthetase [Eggerthella lenta DSM 2243]
 gi|257474253|gb|ACV54573.1| tyrosyl-tRNA synthetase [Eggerthella lenta DSM 2243]
          Length = 403

 Score =  338 bits (867), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 105/405 (25%), Positives = 168/405 (41%), Gaps = 23/405 (5%)

Query: 19  HQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGG 77
            QI     L     +G  +   +G D TA  +H GH   L  L   Q  GH    ++G G
Sbjct: 16  AQIVPESALLEKLKRGTPLNIKLGVDPTAPDIHLGHAVPLRKLRQFQDLGHGVTLIIGDG 75

Query: 78  TSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKY 137
           T++IGDPS R+ +R  + S++I+ N +         +          +  N  WL S+  
Sbjct: 76  TALIGDPSGRNTTRPQLTSEQIKANAQTYVDQAFKILD----PEKTALRYNSEWLLSLNM 131

Query: 138 IDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQM 197
            DLL+ + S F+V R+L  +    R    Q +S  EF Y ++QAYD V +  +    +++
Sbjct: 132 EDLLK-LASNFTVARILERDDFHKRYTNSQPISLHEFLYPLMQAYDSVVIKAD----VEL 186

Query: 198 GGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYN 256
           GG+DQ  N++ G +L E++       LT PLL    G  KM K+    I L  E   P +
Sbjct: 187 GGTDQLFNLLAGRELMEKMGMEPQVCLTLPLLEGTDGVQKMSKSYGNYIGLTDE---PAD 243

Query: 257 FWQYWRNIDDADVVSFAKRLTTLP---MSEIDRMAKLQGKEINEAKKIIATEITTMVHGR 313
            +    +I D  +V + +  + LP   + EI+R         N+ K+ +A  I    +  
Sbjct: 244 MFGKVMSIPDELMVKYYRLASALPVDQIDEIERGLAADELHPNKVKRALAKNIVAAYYDE 303

Query: 314 EEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTNEARRHL 372
             A+ A       F        +P  +        G + L  L+  A  A S  EARR +
Sbjct: 304 AAAQAAEEQFDLVFKQHAVPDDIPEFAADLTPNDDGTVYLAKLLADASLAASAGEARRLI 363

Query: 373 KSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
               +K+N   +  +   +            L  GK+      L 
Sbjct: 364 DGGGVKVNGEALPAKSYNVDPALLAGA---TLQVGKRKF--VKLV 403


>gi|157413891|ref|YP_001484757.1| tyrosyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9215]
 gi|157388466|gb|ABV51171.1| Tyrosyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9215]
          Length = 412

 Score =  337 bits (866), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 97/399 (24%), Positives = 176/399 (44%), Gaps = 28/399 (7%)

Query: 20  QISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTS 79
           Q  +        +   +   +G D T + +H GH      L   Q  GH  + ++G  T+
Sbjct: 26  QTFSEIIDHAKKNNKKLRVKLGIDPTGTDIHLGHSILFKKLRAFQDNGHIAVLIIGDFTA 85

Query: 80  IIGDPSFRDESRRMMRSQEIQENIEKIKGIF-------SSFIKYGTGKTDALMLNNETWL 132
            IGDP+ ++++R  +  +++++N +              S + +   K    +  N  WL
Sbjct: 86  QIGDPTGKNKTRVQLSEKQVKDNAKTYLAQLGMGKPANESILDF-DAKDRIEIRYNSEWL 144

Query: 133 CSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYD 192
             +    ++  +GS  +V++ML+ E    R   +  +S  EF Y +LQ YD V +  +  
Sbjct: 145 KGLNLNSIIDLMGS-ATVSQMLAKEEFNKRYTAQVPISLHEFLYPLLQGYDSVVVQSD-- 201

Query: 193 CRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEM 251
             +++GG+DQ  NI  G DL    K    F +  P+LT   G  KM K+    + L ++ 
Sbjct: 202 --IELGGTDQKFNIAIGRDLQRHFKQDPQFGVLLPILTGLDGVKKMSKSEFNTVALTED- 258

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVH 311
             P + +     + D  + ++ + LT L +S       L+     E ++ +A E+TT+ H
Sbjct: 259 --PLSMYSKLEKVPDNIIPTYFELLTELDLS------FLENSNPRELQRRMAFEVTTLFH 310

Query: 312 GREEAEKAATAAMECF-DMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARR 370
           G EEA KA +   + F         +P IS+   EV   +    L+       S++E++R
Sbjct: 311 GAEEALKAQSNCEKLFLGHKEKVGEIPEISLK--EVVFPVKFFYLLSALKLFKSSSESKR 368

Query: 371 HLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
            +K   +KI++  + N  L    ++        L  GKK
Sbjct: 369 SIKGGGVKIDSQKVINPDLVFNSKNDLEGK--ILQIGKK 405


>gi|312214909|emb|CBX94863.1| similar to tyrosyl-tRNA synthetase [Leptosphaeria maculans]
          Length = 598

 Score =  337 bits (866), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 139/514 (27%), Positives = 225/514 (43%), Gaps = 100/514 (19%)

Query: 2   PAFKSDFLSILSERGFIHQISNP-RELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
              +   LS+L ERGF+  ++     LD L ++  + AY+G D TA SLH GHL  LM L
Sbjct: 58  SGSQQSMLSLLEERGFVKHVAGGHETLDWLLTEKRIGAYVGVDPTAPSLHVGHLLPLMTL 117

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY---- 116
           +W+   G+  +SL+GGGT  IGDPS R  +R    +     N+E I+G            
Sbjct: 118 YWMYLHGYYTVSLLGGGTVQIGDPSGRTTARSRQAADVRSMNVESIQGQLEKLWTNVKCL 177

Query: 117 -------GTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSL 169
                          +L+N +WL ++  ++L+R++GS   +  MLS +SV+ R++  + +
Sbjct: 178 GIKHQYSQYTSRRFDILDNRSWLETLSAVELMRDLGSGMRLGPMLSRDSVKLRMESGEGM 237

Query: 170 SFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT----------- 218
           +  EF+Y + QAYD+  + KN   ++Q+GGSDQ+GNI  G+D    ++            
Sbjct: 238 AISEFSYPLFQAYDWWSMYKNRGVQMQIGGSDQYGNICAGMDAVSHMRKIHRMSDTTSKD 297

Query: 219 ----PKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAK 274
                  + LT+PLLTTASG K GK+   A+WL+K M S ++ +QY+    D DV  + K
Sbjct: 298 DDPSVAAYGLTTPLLTTASGEKFGKSAGNAVWLDKHMLSSFDLYQYFVRTADDDVERYLK 357

Query: 275 RLTTLPMSEIDRMAKLQGKE--INEAKKIIATEITTMVHGREEAEK---AATAA----ME 325
             T LP+ +I+ + K Q ++     A+ I+A EI  + HG  EA+K   A   A      
Sbjct: 358 LFTFLPLEDIELLMKKQRQDESRRLAQHILAKEIVELAHGSAEAKKAETAHKEAFSAGTN 417

Query: 326 CFDMSIHSQHMPT----------------------------------------------- 338
            F +      + T                                               
Sbjct: 418 TFPLGALRSALSTNNKSDSPVKPLNNREKQLAAYKEAYAASSTTQARSGTSSERQKSEDR 477

Query: 339 --ISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKI---------NNSIIS-- 385
             I+I    +  G     ++  AG A+S ++A+R +      +         N +++   
Sbjct: 478 NVITIPLSMLQPG-SFPRVLFAAGLASSKSDAQRLIAKRGAYVVVPGSGSQENPTVLRWA 536

Query: 386 --NEKLQIKLQDFDST-GNIKLSFGKKNHIICHL 416
                + +    F      + L  GK    IC +
Sbjct: 537 TIEAGVAVDPNHFLVDWEALILRSGKSKIQICRV 570


>gi|254518268|ref|ZP_05130324.1| tyrosyl-tRNA synthetase [Clostridium sp. 7_2_43FAA]
 gi|226912017|gb|EEH97218.1| tyrosyl-tRNA synthetase [Clostridium sp. 7_2_43FAA]
          Length = 402

 Score =  337 bits (866), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 89/404 (22%), Positives = 177/404 (43%), Gaps = 30/404 (7%)

Query: 21  ISNPRELDILC-----SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMG 75
           I N  EL         +   +   +G D +A  +H GH   L  +  +Q  GHK + ++G
Sbjct: 19  IVNEEELRKKLEKAEKNNKPLIIKLGLDPSAPDIHLGHAVVLRKIKQMQDLGHKAVIVIG 78

Query: 76  GGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSI 135
             T  IGDP+ + + R+ +  +E+  N E  K      +     ++   +  N  WL  +
Sbjct: 79  DFTGKIGDPTGKAKGRKALTDEEVLRNAETYKTQIFKVLD----ESKTEVRFNSEWLSKL 134

Query: 136 KYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRL 195
            + D+L+ + +  +V RML  +  ++R K    +   EF Y ++QAYD + L  +    +
Sbjct: 135 NFNDVLK-LAATTTVARMLERDDFQNRYKNNVPIGVHEFFYPLMQAYDSIALKAD----I 189

Query: 196 QMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSP 254
           ++GG+DQ  NI+ G  L + +      A+  P+L    G  KM K+L   I +N+     
Sbjct: 190 ELGGTDQTFNILMGRTLQKTMGEEGQVAMFMPILEGLDGIEKMSKSLGNYIGVNEPANI- 248

Query: 255 YNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIATEITTMVHG 312
              ++    + D+ ++ + +  T     +ID +     +G+   + K  +A  IT + H 
Sbjct: 249 --MFKKVMEVPDSLIIKYFELATDEHPDKIDEIKNRLDRGENPRDIKLELAQIITNLYHC 306

Query: 313 REEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHL 372
             E + A       F        +P +++  +++     +++ +V   + +S  E  R +
Sbjct: 307 ENEVKSAMEFYNSAFTKKEIPDDIPNLTVESNKL---RDIVSNLVSEKYVSSKKEFTRLV 363

Query: 373 KSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +   ++IN   I++  + +  QD        +  GKK  +   +
Sbjct: 364 EQGGVQINGEKINSLDINLLTQD-------VIKIGKKKFVKLKI 400


>gi|330929905|ref|XP_003302815.1| hypothetical protein PTT_14783 [Pyrenophora teres f. teres 0-1]
 gi|311321566|gb|EFQ89082.1| hypothetical protein PTT_14783 [Pyrenophora teres f. teres 0-1]
          Length = 611

 Score =  337 bits (866), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 119/360 (33%), Positives = 187/360 (51%), Gaps = 28/360 (7%)

Query: 2   PAFKSDFLSILSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
              +   LS+L ERGF+  ++  R+ L+ L ++  +  Y+G D TA SLH GHL  LM L
Sbjct: 58  TGMQQSMLSLLEERGFVKDVAGGRKRLEWLLTEKRIGVYVGVDPTAPSLHVGHLLPLMAL 117

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSF------- 113
           +W+   G+  +SL+GGGT  IGDPS R  +R          N+  I     +        
Sbjct: 118 YWMYLHGYYTVSLLGGGTVQIGDPSGRTTARSRQGEDVQSMNVRSINEQLKTLWTNVKCL 177

Query: 114 -IKYGTGKT---DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSL 169
            IK+           +LNN  WL  +  ++L+R++GS   +  MLS +SV+ R++  + +
Sbjct: 178 GIKHQYSHNISRKQSILNNRNWLEKLNAVELMRDLGSGMRLGAMLSRDSVKLRMESGEGM 237

Query: 170 SFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK------------ 217
           +  EF+Y + QAYD+  + K+   +LQ+GGSDQ+GNII G+     ++            
Sbjct: 238 AISEFSYPLFQAYDWWSMYKDRGVQLQIGGSDQYGNIIAGMGAVSHMRKIHGLSGGTEEE 297

Query: 218 --TPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKR 275
                 + LT+PLLTT SG K GK+   A+WL+ +M  P++ +QY+    DADV  + K 
Sbjct: 298 DPKEAPYGLTTPLLTTPSGEKFGKSAGNAVWLDGQMLKPFDLYQYFLRTADADVERYLKL 357

Query: 276 LTTLPMSEIDRMAKLQGKEI--NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS 333
            T LP+  I  +   Q ++     A+  +A EI  + HG  EA+K A A  + F    ++
Sbjct: 358 FTFLPLDSIALLMTSQNRDPSKRVAQHTLAQEIVELAHGAAEAKKVAMAHKDAFGQGTNT 417



 Score = 44.0 bits (103), Expect = 0.046,   Method: Composition-based stats.
 Identities = 20/93 (21%), Positives = 32/93 (34%), Gaps = 15/93 (16%)

Query: 339 ISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKI---NNSIISNEKL-----Q 390
           I++    +  G     ++  AG ATS +EA R + S    +   N+    N         
Sbjct: 491 ITLPLSLLHAG-SFPHVLQAAGLATSKSEASRLIASKGAYVVVPNSGPPENPTALRWESI 549

Query: 391 IKLQDFDSTGN------IKLSFGKKNHIICHLC 417
              +D D          + L  GK    IC + 
Sbjct: 550 KASKDCDPNHYLVDFEALVLRSGKSRIQICRVV 582


>gi|310789952|gb|EFQ25485.1| tRNA synthetase class I [Glomerella graminicola M1.001]
          Length = 636

 Score =  337 bits (865), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 116/486 (23%), Positives = 211/486 (43%), Gaps = 75/486 (15%)

Query: 7   DFLSILSERGFIHQISNPR-ELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +   I  ERG++  ++    ++  L     + AY+G D TA+SLH GHL   M LFW+  
Sbjct: 65  NIWDIFEERGYVKDVAGRTPQIKELLRTKRIGAYVGVDPTAASLHVGHLLPFMPLFWMHL 124

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFI--------KYG 117
            G+  +SL+GG T  IGDP+ R ++R +M + E+  NI KI                KYG
Sbjct: 125 HGYTAVSLVGGATGRIGDPTDRLKTREVMANSEVSMNITKIHYQLKKIWSNVEALGRKYG 184

Query: 118 TGKTDA---LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEF 174
                A    ++NN  W   +   D+++ +G +  +  MLS ++V++++++   +S  EF
Sbjct: 185 KEPEWAGKKHLVNNNMWWQGLPLYDVMKRLGRYMRIGPMLSRDTVKNKMEKGDGMSLAEF 244

Query: 175 NYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK-------------- 220
            Y ++Q +DF  L      ++Q+GGSDQ+GNI+ GI+  + +++ +              
Sbjct: 245 IYPLMQGWDFWHLYSKLGVQMQIGGSDQFGNIVTGIEAVKTIRSSEENPNMRMPDTWKDD 304

Query: 221 LFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLP 280
               T PLLT  +GTK GK+   A+WL+  MTS ++ + Y+    D +V    K  T LP
Sbjct: 305 PIGFTVPLLTDNAGTKFGKSAGNAVWLDPFMTSAFDLYGYFARRPDNEVEKLLKLFTFLP 364

Query: 281 MSEIDRMAKLQGKEI--NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPT 338
            + I+++     ++     A+  +A E+ ++VHG + A +        F    ++  +  
Sbjct: 365 TTSIEKLMIEHAQDPPKRVAQHTLAFEVLSLVHGADVAIREQQQHQFMFSKGGNAAQIAG 424

Query: 339 ISISKDEVSR-------------------------------GMGLLTLIVKAGFATSTNE 367
            + + +E                                    G+  ++  AG A+S +E
Sbjct: 425 ATGASEEGQDFLAPYKAIEGHPTTLNNAPKMDMQLPENLIYNQGIARILYAAGLASSVSE 484

Query: 368 ARRHLKSNAIKI----------------NNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
             R  ++    +                + + +     Q   +       + +  GK N 
Sbjct: 485 GHRIARAQGAYVAAAPGKDMRGLVPGNLDWTPVKLWYPQDVPKFLIDGRLLIIRKGKHNV 544

Query: 412 IICHLC 417
            I  + 
Sbjct: 545 RIIEVV 550


>gi|72382739|ref|YP_292094.1| tyrosyl-tRNA synthetase [Prochlorococcus marinus str. NATL2A]
 gi|115305816|sp|Q46JD7|SYY_PROMT RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|72002589|gb|AAZ58391.1| tyrosyl-tRNA synthetase [Prochlorococcus marinus str. NATL2A]
          Length = 415

 Score =  337 bits (865), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 92/392 (23%), Positives = 164/392 (41%), Gaps = 27/392 (6%)

Query: 31  CSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDES 90
             +  +   +G D T + +H GH      L   Q  GH  I ++G  T+ IGDP+ + ++
Sbjct: 41  VDKKPLRVKLGIDPTGTDIHIGHSILFRKLRAFQDAGHTAILIIGDFTARIGDPTGKSKT 100

Query: 91  RRMMRSQEIQENIEKIKGIFSSFIKYGTG------KTDALMLNNETWLCSIKYIDLLREI 144
           R  +   E+Q N                        +   +  N  WL ++    ++ E+
Sbjct: 101 RIQLSKDEVQSNALNYLEQLGLGKDPKDSLLDFSIPSRIEIRRNSEWLENLNLSKVI-EL 159

Query: 145 GSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWG 204
            S  +V +ML+ E   +R K    +S  EF Y +LQ YD V +  +    +++GG+DQ  
Sbjct: 160 LSNSTVGQMLAKEDFSNRYKSGTPISLHEFLYPLLQGYDSVAINSD----VELGGTDQKF 215

Query: 205 NIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
           NI  G DL +       F +  P+L    G  KM K+L   + +N++     + +     
Sbjct: 216 NIAMGRDLQKAFGQKPQFGMLLPILVGLDGARKMSKSLDNIVGINEDSL---SMYSKLEK 272

Query: 264 IDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAA 323
           + D  V+++   LT   + E+            E +K +A ++T+   G E A+ A   +
Sbjct: 273 VPDDLVLTYLNLLTNENLKEL-------SSNPREVQKFMALKVTSNFKGIEAAKNAQFNS 325

Query: 324 MECFDMSIHS-QHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNS 382
            +    +  S + +P  S+S   V+       L  K    +S++EARR +    ++I+  
Sbjct: 326 EKLVLGTKDSLEEIPEASVSN--VNFPAKAFYLFSKMEMCSSSSEARRQILGGGVRIDGK 383

Query: 383 IISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            I +  L+    D        L  GKK  +  
Sbjct: 384 KIMDPNLEFHTPDDLIGK--ILQVGKKKFLRV 413


>gi|116182242|ref|XP_001220970.1| hypothetical protein CHGG_01749 [Chaetomium globosum CBS 148.51]
 gi|88186046|gb|EAQ93514.1| hypothetical protein CHGG_01749 [Chaetomium globosum CBS 148.51]
          Length = 708

 Score =  337 bits (865), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 126/478 (26%), Positives = 210/478 (43%), Gaps = 68/478 (14%)

Query: 7   DFLSILSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +   +L ERG++  I+  RE +  +     V AY+G D TASSLH GHL  LM LFW+  
Sbjct: 63  NTWDMLEERGYVKDIAGSRETIREMMRLKRVKAYVGVDPTASSLHVGHLLPLMPLFWMYM 122

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFI--------KYG 117
            G+   +L+GG T  IGDP+ R + R  +   ++  N+ K+                +YG
Sbjct: 123 HGYGAFTLLGGSTVKIGDPTDRLKDREPIAKADLAMNVTKVHFQLKKLWANVETQARRYG 182

Query: 118 TGKTDAL---MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEF 174
             K  A    ++NN TW  S+  +++LR  G    +  MLS E+V+ ++     +SF EF
Sbjct: 183 YEKEWAWQRAVVNNNTWWNSVTLLEVLRRAGRHMRIGPMLSRETVKRKMSEGDGMSFAEF 242

Query: 175 NYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK-------------- 220
            Y I+Q +D+  L      ++Q+GGSDQ+GNI+ G+D+ + ++  +              
Sbjct: 243 TYPIMQGWDWWTLFNQQKVQMQIGGSDQYGNIVAGVDIVKTVRDTEPDEARRIPRDGPID 302

Query: 221 -LFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTL 279
                T PLL  +SG K GK+   A+WL+  MTS ++ + Y+    D DV    K  T +
Sbjct: 303 DPAGFTVPLLLDSSGVKFGKSAGNAVWLDHFMTSTFDLYGYFVRRPDDDVEKLLKLFTFM 362

Query: 280 PMSEIDRMA--KLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS---- 333
           P+  I ++   +++      A+  +A E+ T+VHG E A++A       ++         
Sbjct: 363 PLEAIQKVMAQQMEDPSKRVAQHCLAYEVLTLVHGEEAAKEAREQHQMMYNKVPLPVVAG 422

Query: 334 ---------------QHMPTISISKDE-VSRGMGLLTLIVKAGFATSTNEARRHLKSNAI 377
                           + P I +     +  G  +  ++  AG A+ST++  R     A 
Sbjct: 423 APGAEYEPPVGPTTLNNAPRIDMRLPRSLIMGKSIGRILYAAGLASSTSDGHRLAAQKAA 482

Query: 378 KINN-------------------SIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            I                     + ++    Q   +       + L  GK N  I  +
Sbjct: 483 YIGGLPGRRPGKGEPMNPSQLTWNPVTLWFPQETGKYLIDDKLLILRKGKHNVRIIQV 540


>gi|269123481|ref|YP_003306058.1| tyrosyl-tRNA synthetase [Streptobacillus moniliformis DSM 12112]
 gi|268314807|gb|ACZ01181.1| tyrosyl-tRNA synthetase [Streptobacillus moniliformis DSM 12112]
          Length = 402

 Score =  337 bits (865), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 109/404 (26%), Positives = 186/404 (46%), Gaps = 29/404 (7%)

Query: 9   LSILSERGFIHQISNPRELDIL----CSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
             IL  RG    IS       L     +   +   +G D T S LH GH   +  L   Q
Sbjct: 14  FEILK-RGCDEIISEEEFKKKLENSIRNNKPLKVKLGIDPTGSELHIGHAVPIRKLKQFQ 72

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             GH+   L+G  T+ IGDP+ + E+R+M+  + IQENI+         +          
Sbjct: 73  DLGHEVNFLIGTFTARIGDPTGKSETRKMLSFETIQENIKTYLEQVKIILDL----NKIK 128

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           ++ N  WL  +K  ++L+ + S F+V++M+  E    RL   Q +S +EF Y ILQ YD 
Sbjct: 129 VVYNHEWLEKLKLEEVLKLL-SMFTVSQMIQREDFSKRLSNNQPVSLIEFTYPILQGYDS 187

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSG 243
           V L    +  +++G ++Q  N++ G DL +     +   +  P+L    G  KM K+L  
Sbjct: 188 VAL----EADVELGATEQKFNLLRGRDLQKNFNQEQQICMIMPILVGLDGVEKMSKSLGN 243

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIA 303
            I +     SP + +    +I D  ++++ + +T LP+ E+  M K Q     + KK + 
Sbjct: 244 YISI---QDSPNDMFGKIMSISDELMLNYYEMITDLPLDEVKEMLKTQ--HPMDCKKKLG 298

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
            E+    +G + A ++       F     +  +P I I ++E++     L L+ K  F +
Sbjct: 299 YELVKEYYGEQVAIESKAWFENVFSNRNLNVELPEIKIVENELAA----LELLSKLNFIS 354

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFG 407
           S +E RR +   A+K+N+ II +    I L +      + +  G
Sbjct: 355 SNSEGRRLIDQGAMKVNDVIIKDINEIINLTE-----EVIVRCG 393


>gi|189485312|ref|YP_001956253.1| tyrosyl-tRNA synthetase [uncultured Termite group 1 bacterium
           phylotype Rs-D17]
 gi|170287271|dbj|BAG13792.1| tyrosyl-tRNA synthetase [uncultured Termite group 1 bacterium
           phylotype Rs-D17]
          Length = 388

 Score =  337 bits (864), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 113/410 (27%), Positives = 181/410 (44%), Gaps = 35/410 (8%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           ++ L  +  RG    IS       L S   +   +G D T S LH GH   +  L   Q 
Sbjct: 2   NEALEKIK-RGTNEIISFEELKKKLASGKKLRIKLGIDPTTSDLHLGHTVIINKLKTFQD 60

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+ + L+G  T+ IGDPS R E R +M  ++I+ N           +     +    +
Sbjct: 61  LGHQIVFLIGDFTARIGDPSGRSEMRPVMTDEQIKNNARTYADQIFKILNRDKTE----I 116

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           + N  WL  +    LL  + +  +V +ML  +  + R K +  LS +EF Y +LQAYD V
Sbjct: 117 VYNSKWLSELGVKGLL-NLAAKSTVAQMLVRDDFKKRYKEDSPLSIVEFLYPLLQAYDSV 175

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK-LFALTSPLLTTASGT-KMGKTLSG 243
            L  +    +++GGSDQ  N++ G ++            +T PLL    GT KM K+   
Sbjct: 176 VLNAD----VELGGSDQKFNLLLGREIQRDYGIKDVQVVITMPLLEGTDGTKKMSKSYKN 231

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIA 303
            I LN    SP + +    +I D  +  + + LT + ++ +  M         EAK  +A
Sbjct: 232 CIALN---DSPEDMFGKIMSISDELMCRYHELLTQIDLNVVKNM------HPKEAKSALA 282

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
            E+    +G+EEA KA     + F        +    I  +E    + L  L+VK+G  +
Sbjct: 283 KELVERYYGKEEALKAEEEFDKIFSKKNIPNDIGEYRIKDEE----IKLSDLLVKSGMIS 338

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFD--STGNIKLSFGKKNH 411
           S NEARR ++   ++I++           ++DF   S     L  GK+  
Sbjct: 339 SRNEARRIIEQGGVRIDSRK--------TVRDFVVKSGNTFVLQVGKRKF 380


>gi|298491061|ref|YP_003721238.1| tyrosyl-tRNA synthetase ['Nostoc azollae' 0708]
 gi|298232979|gb|ADI64115.1| tyrosyl-tRNA synthetase ['Nostoc azollae' 0708]
          Length = 418

 Score =  336 bits (863), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 89/395 (22%), Positives = 163/395 (41%), Gaps = 26/395 (6%)

Query: 22  SNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSII 81
           +   E  ++ +   +   +G D T + +H GH   +  L   Q  GH  + ++G  T+ I
Sbjct: 46  TESLEKRLVNANRPLRVKLGIDPTGADIHLGHSIPVRKLRAFQDAGHTAVLIIGDFTARI 105

Query: 82  GDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLL 141
           GDP+ +   R  +   ++ +N +         + + T      +  N  WL  +    +L
Sbjct: 106 GDPTGKSHVRCQLTEGDVAQNAQTYLDQVRPILDFDTP-GSLEVRYNSEWLSRLDLGKVL 164

Query: 142 REIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSD 201
           + + S  +V +ML+ E    R K+E  +   EF Y ++QAYD V      +  +++GG+D
Sbjct: 165 QLL-STMTVGQMLAKEGFAERYKKENPIFLHEFLYPLMQAYDSVAT----EADVELGGTD 219

Query: 202 QWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQY 260
           Q  NI  G DL         F L  P+L    G  KM K+L+  + L++    P   +Q 
Sbjct: 220 QKFNIAVGRDLQRHFGLKPQFGLLLPILIGTDGVRKMSKSLNNYVGLSE---HPSQKYQK 276

Query: 261 WRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAA 320
            + + D  +  + + LT LP+  +              ++ +A EI    HG   A +A 
Sbjct: 277 IQAVPDNLLSQYFELLTDLPLDSLPE-------NPRARQEFLAWEIVRQYHGEVAATEAK 329

Query: 321 TAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKIN 380
            AA            +   S++   V   + L  ++   G   ST E +R ++   ++++
Sbjct: 330 EAAKS----GGKEGTLLEFSLAAI-VQFPVKLAFILGATGLCKSTAEGKRKIQEGGVRLD 384

Query: 381 NSIISNEKLQI-KLQDFDSTGNIKLSFGKKNHIIC 414
              +++         D        L  GKKN +  
Sbjct: 385 GEKVTDADTTFAAPGDLYFK---VLQVGKKNFVRL 416


>gi|296122444|ref|YP_003630222.1| tyrosyl-tRNA synthetase [Planctomyces limnophilus DSM 3776]
 gi|296014784|gb|ADG68023.1| tyrosyl-tRNA synthetase [Planctomyces limnophilus DSM 3776]
          Length = 414

 Score =  336 bits (863), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 90/412 (21%), Positives = 177/412 (42%), Gaps = 31/412 (7%)

Query: 15  RGFIHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
           RG + ++    EL    ++       +    G D T   +H GH   L  L   Q+ GH+
Sbjct: 22  RG-VEKVVPEEELARKLAKSRETGRPLRIKYGIDPTGIDVHLGHTVPLRKLRQFQELGHQ 80

Query: 70  PISLMGGGTSIIGDPSFRDESR-RMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
            + ++G  T+++GDPS RD++R + + ++E++ N           I     +    +  N
Sbjct: 81  AVLIIGNFTAMVGDPSGRDQARAKRLSAEEVEANATDYLKQVGKVIDLSKTE----IHRN 136

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             W   + + D+L  + S  +V ++L+ +    R   +  +   E  Y ++QA+D VE+ 
Sbjct: 137 GEWFSKMTFADIL-TLCSKVTVAQLLTRDDFAKRYASQSPIFLHECLYPVMQAWDSVEIK 195

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWL 247
            +    +++GG++Q  + +   DL    +  +   + SP+L    G  +MGK+L   I +
Sbjct: 196 SD----IELGGTEQLYSFMLARDLQRDQQLEQQLGVMSPILVGLDGKRRMGKSLGNYIGI 251

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
            +   SP    + +  I D  +  + + LT +P+ E+    +L       AK+ +A E+ 
Sbjct: 252 AE---SPLAMMKKFMQIPDEVMPMYFELLTNIPLDEV---QQLLAGHPKLAKQRLAREVI 305

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTN 366
              H     ++A                +  ++I    VS G +    L  +AG   +T+
Sbjct: 306 AQYHTSTAGDEAIQQWEAEVSAGALPADIEQVTIEASVVSNGTVTAAILFKQAGLCPTTS 365

Query: 367 EARRHLKSNAIKINN--SIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +ARR +        +   +IS+    I + +      + L  GKK +   +L
Sbjct: 366 DARRLISQGGAYFGDDLQVISSHDQAIPITN-----GLLLKAGKKRYARLNL 412


>gi|50554259|ref|XP_504538.1| YALI0E29139p [Yarrowia lipolytica]
 gi|49650407|emb|CAG80141.1| YALI0E29139p [Yarrowia lipolytica]
          Length = 527

 Score =  336 bits (863), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 107/443 (24%), Positives = 195/443 (44%), Gaps = 48/443 (10%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L +R  +  ++    L+    Q   + Y+G D +  S+H GH+  +M++  L   G
Sbjct: 54  LLQYLKDRNLVANVT-EDSLEQQLQQKFTSFYLGIDPSGPSMHLGHMVPVMIMLHLFLRG 112

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSS------------FIK 115
           H   +L+GG T  +GDP+ + E R+ +    +Q N++ +                   + 
Sbjct: 113 HYAFALVGGATGAVGDPTGKTEERKTVVKDTLQYNLDALATSLERTFLHAVAAAKKEGVY 172

Query: 116 YGTG-KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEF 174
           YG   K    ++NN  W  ++ +++ L   G    VN+M++ +SV+ RL     + + EF
Sbjct: 173 YGDQIKLQYAIVNNHDWWKNVGFLEFLASYGRLIRVNQMMARDSVKDRLNSATGIGYNEF 232

Query: 175 NYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL-----KTPKLFALTSPLL 229
           +Y ILQA+DF  L +   C LQ+GG DQWGNI  G+DL +R           + +T+ L+
Sbjct: 233 SYQILQAFDFWHLFETQGCSLQLGGGDQWGNITAGVDLTKRAAAVNNLKETPYGITTQLM 292

Query: 230 TTASGTKMGKTLSGA-IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA 288
            + SG K+GK+ + A IWLN EMT P+  +QY     D DV  + K  T + + +I  + 
Sbjct: 293 LSKSGKKLGKSENNATIWLNPEMTRPFELYQYLLKTADEDVEQYLKMFTFVSLEDIATIM 352

Query: 289 KLQGKE--INEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV 346
           +   +   +  A++++A + T ++HG     +        F  S    +          +
Sbjct: 353 RQHAENESLRYAQRVLADKFTALIHGDTVVGRCQVITRIMFAKSSLELN---QQPKPAAL 409

Query: 347 SRGMGLLTLIVKAGFAT------------------STNEARRHLKSNAIKINNS---IIS 385
           +    L  ++ + G                     S + A++ + +  + +       + 
Sbjct: 410 TNSESLKQVLAEEGLLKPLDKSTDYTTLVSTHFNMSKSAAKKLISNKGVSVGLEGAQKV- 468

Query: 386 NEKLQIKLQDFDSTGNIKLSFGK 408
            E   I  +  D    + +  GK
Sbjct: 469 -EIGPILEKHKDMGDFLIVRVGK 490


>gi|159903924|ref|YP_001551268.1| tyrosyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9211]
 gi|159889100|gb|ABX09314.1| Tyrosyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9211]
          Length = 415

 Score =  336 bits (863), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 95/401 (23%), Positives = 168/401 (41%), Gaps = 29/401 (7%)

Query: 20  QISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTS 79
           Q    R ++   +Q  +   +G D T S +H GH      L   Q  GH  + ++G  T+
Sbjct: 30  QSLARRLIESEQNQSPLRIKLGIDPTGSEIHLGHSILFRKLRSFQDAGHIAVLIIGDFTA 89

Query: 80  IIGDPSFRDESRRMMRSQEIQENIEKIKGIF-------SSFIKYGTGKTDALMLNNETWL 132
            IGDP+ + ++R  + S+E+++N               +S + + T      +  N  WL
Sbjct: 90  RIGDPTGKSKTRNQLTSEEVEKNAITYLEQLGYGKSSETSLLDFETP-GRIEIRRNSEWL 148

Query: 133 CSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYD 192
                  ++ ++ S  +V +ML+ E   +R      +S  E  Y +LQ YD V +  +  
Sbjct: 149 SDFDMSKII-DLLSHATVGQMLAKEDFANRYNSGTPISLHELLYPLLQGYDSVAVKAD-- 205

Query: 193 CRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEM 251
             +++GG+DQ  N+  G D+         F L  P+L    G  KM KTL+  + L  + 
Sbjct: 206 --VELGGTDQKFNVAMGRDIQRLFDQRPQFGLLLPILVGLDGVQKMSKTLANTVALKDDA 263

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVH 311
               + +     I D  V S+   LT L  +++          + E +K++A  +T   H
Sbjct: 264 L---SMYSKLEKIPDDLVNSYLTLLTNLEQTDM-------PSNLREKQKLMALNVTANFH 313

Query: 312 GREEAEKAATAAMECFDMSIHS-QHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARR 370
           G   A  A   A +       S   +P +SI K  V+  +    L+   G   S++EARR
Sbjct: 314 GMPAAIAAQEDASKLVAGLQDSLSDVPEVSIKK--VNLPVKAFYLLSAIGLCKSSSEARR 371

Query: 371 HLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
            +   A++++   I +  L+             +  GK+  
Sbjct: 372 QILGGAVRLDGKKILDPNLEFDNDSELVGK--VVQLGKRTF 410


>gi|291320732|ref|YP_003515997.1| tyrosyl tRNA synthetase [Mycoplasma agalactiae]
 gi|290753068|emb|CBH41044.1| Tyrosyl tRNA synthetase 1 [Mycoplasma agalactiae]
          Length = 411

 Score =  336 bits (863), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 118/422 (27%), Positives = 213/422 (50%), Gaps = 27/422 (6%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + L  L ER  +  ISN  +   L S      Y+G+D TA SLH G+   + +L   ++ 
Sbjct: 2   NILKDLEERLILKDISNKDKFANL-SPSTTGVYVGFDPTAESLHLGNYILISVLLRFKEY 60

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           G K  +++GG T +IGDPSF+D  R ++ ++ + +N  KIK    SF        D  ++
Sbjct: 61  GFKTYAVLGGATGMIGDPSFKDSERVLLDNESVNKNKSKIKAQLESF--------DLEVI 112

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           +N  +   +  ++ LR +G   +V+ M++ ESV+ R+  ++ LSF EF Y +LQ +DF++
Sbjct: 113 DNYDFYKDMNVLEFLRNVGKLVNVSYMMAKESVQKRI--QKGLSFTEFTYQLLQGFDFLK 170

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERL--KTPKLFALTSPLLTTASGTKMGKT-LSG 243
             +    ++Q+GGSDQWGNI+ GID+  ++     +   +T  LL+  +G K+GK+   G
Sbjct: 171 TYQELGIKVQLGGSDQWGNIVTGIDMISKVVGDKHEAVGVTVNLLSDENGKKIGKSTGGG 230

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKI 301
           A+W++K M SP+  +QY  + +D+ +       +   +SEI+ + +         EA++ 
Sbjct: 231 ALWIDKNMCSPFKMYQYLLSQNDSRIKELLYWFSFKSVSEINEVLEKHFANPSAQEAQRF 290

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQ-------HMPTISISKDEVSRGMGLLT 354
           +A+E+   + G  E ++A       FD S  +         +    +    + +G  ++ 
Sbjct: 291 LASEVVENIFGANELKQAKNITKILFDKSFDTSVLTLNDLEIIENYLPTCPIKQGDSVIE 350

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIIS-NEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            ++K  F +S  EAR  +++ A+KI+N  I  +   +                GKK  I+
Sbjct: 351 TLIKNKFISSNREAREFIQAKALKIDNKEIEFDTVYRPS---LFEGKYAFFKKGKKQVIL 407

Query: 414 CH 415
             
Sbjct: 408 LK 409


>gi|124514296|gb|EAY55810.1| Tyrosyl-tRNA synthetase [Leptospirillum rubarum]
          Length = 403

 Score =  336 bits (861), Expect = 6e-90,   Method: Composition-based stats.
 Identities = 99/416 (23%), Positives = 180/416 (43%), Gaps = 35/416 (8%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLML 59
           +P  K   + +  E  F       ++L+     G  +    G+D T+  LH GH   L  
Sbjct: 14  LPILKRGIVDLYVEEDF------EKKLEKSYKTGIPLKVKAGFDPTSPDLHLGHFVLLKK 67

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG 119
           L   Q  GH    ++G  T+ IGDP+ R E R+ +  ++I EN +  +      +K    
Sbjct: 68  LRQFQDMGHLVQFVVGDFTAFIGDPTGRSEIRKPISPEQIAENAKTYERQVFRVLKQERT 127

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
           +    ++ N +W+  +    L+R  G   +V R L  +  + R+     +   E  Y ++
Sbjct: 128 Q----VVFNSSWMKKLGVDGLVRLAGLQ-TVARFLERDDFQKRMNERLPIHLHELLYPLM 182

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMG 238
           Q YD V L  +    +++GGSDQ  N++ G DL  + +      LT PLL    G  KM 
Sbjct: 183 QGYDSVVLESD----VELGGSDQLFNLLVGRDLLRQHQKEPQVVLTLPLLVGLDGEKKMS 238

Query: 239 KTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEA 298
           K+L  A+ L     SP   +    +I D+ + S+   LT L     D   +L      +A
Sbjct: 239 KSLRNAVALE---DSPDEMFGRLMSIPDSLIASYTTLLTDLDP---DANIQLH---PRDA 289

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVK 358
           K  +A  +    HG + + KA  +  + F      + +P   + +      + L T++V+
Sbjct: 290 KIQMARSVVAQFHGEDNSNKAVESFEKVFSRKEIPEEIPVFHVKE---GGSVRLSTVMVQ 346

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +G A S ++A++ ++  A+  N   + +    ++ ++        L  GK+ +   
Sbjct: 347 SGAAKSESQAKQLIRQGAVDWNGETVQDPFKSVEPKND------LLKVGKRFYCRV 396


>gi|240047239|ref|YP_002960627.1| Tyrosyl-tRNA synthetase [Mycoplasma conjunctivae HRC/581]
 gi|239984811|emb|CAT04796.1| Tyrosyl-tRNA synthetase [Mycoplasma conjunctivae]
          Length = 412

 Score =  335 bits (860), Expect = 7e-90,   Method: Composition-based stats.
 Identities = 126/424 (29%), Positives = 204/424 (48%), Gaps = 35/424 (8%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
            +FL  L  RG +  IS+  +   L  +     YIG+D TASSLH G+   + LL  L++
Sbjct: 4   KEFLEDLQLRGILKDISDQDKFLNL--EKGKKIYIGFDPTASSLHLGNYIAINLLQRLKQ 61

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
                I+++GG T +IGDPSF  + R ++ +Q + EN  KI      F        +  +
Sbjct: 62  FDIPVIAVVGGATGMIGDPSFASKERVLLSNQTLLENKAKIIAQLQKF--------NLNV 113

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
            +N      +  I+ LR+IG   ++  +L+ +S+ +R++    LSF EF+Y ++Q +DF 
Sbjct: 114 FDNLEIYKDMNIIEFLRDIGKNINIAYLLAKDSIATRIQS--GLSFTEFSYQLIQGWDFK 171

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERL---KTPKLFALTSPLLTTASGTKMGKTLS 242
            L +N++   Q GGSDQWGN++ G+DL ++         F +T  LLT  +G K GKT  
Sbjct: 172 YLYENFNVVAQAGGSDQWGNMVTGLDLIKKTVANHKQDAFVMTVNLLTDENGVKFGKTFG 231

Query: 243 GA-IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAK 299
           G+ IWL+  M SPYN +Q+  N  DA      K L+  P+S+I+ +     +       +
Sbjct: 232 GSPIWLDANMYSPYNLYQFLFNQSDAQAEKIIKWLSFQPLSKINELIVTHNENKKARILQ 291

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKA 359
           K +A EI   +HG+   + A   +   F  + +        IS +       +L L+  A
Sbjct: 292 KELAHEIVANIHGKSGLKSALEISDILFGKTSYQ------EISYENKQELKKVLPLLSSA 345

Query: 360 GFAT----------STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
            F+           S  E    +   A++IN   I++ ++ I     D      +  GKK
Sbjct: 346 NFSAASLIEQKVFNSKRELNEFIAQGALEINGQKIAHIEM-ISANLKDENNLFLIKKGKK 404

Query: 410 NHII 413
           N  I
Sbjct: 405 NFFI 408


>gi|91070497|gb|ABE11406.1| tyrosyl-tRNA synthetase [uncultured Prochlorococcus marinus clone
           HOT0M-1A11]
          Length = 412

 Score =  335 bits (859), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 93/400 (23%), Positives = 176/400 (44%), Gaps = 29/400 (7%)

Query: 20  QISNPRELD-ILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGT 78
             +    LD    +   +   +G D T + +H GH      L   Q  GH  + ++G  T
Sbjct: 25  DQTFSEILDHAKRNNKKLRVKLGIDPTGTDIHLGHSILFKKLRAFQDNGHIAVLIIGDFT 84

Query: 79  SIIGDPSFRDESRRMMRSQEIQENIEKIKGIF-------SSFIKYGTGKTDALMLNNETW 131
           + IGDP+ ++++R  +  +++++N +              S + + +      +  N  W
Sbjct: 85  AQIGDPTGKNKTRLQLSEKQVKDNAKTYLTQLGMGKPANESILDFDSKDR-IEIRYNSEW 143

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L  +    ++  +GS  +V++ML+ E    R   +  ++  EF Y +LQ YD V +  + 
Sbjct: 144 LKGLNLNSIIELMGS-ATVSQMLAKEEFNKRYTSQIPIALHEFLYPLLQGYDSVVVRSD- 201

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKE 250
              +++GG+DQ  NI  G DL    K    F +  P+LT   G  KM K+    + L  +
Sbjct: 202 ---IELGGTDQKFNIAIGRDLQRYFKQEPQFGVLLPILTGLDGFKKMSKSEFNTVGLTDD 258

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMV 310
              P + +     + D  + ++ + LT L +S       L+     E ++ +A E+TT+ 
Sbjct: 259 ---PLSMYSKLEKVPDNIIPTYFELLTELDLS------FLENLNPRELQRRMALEVTTLF 309

Query: 311 HGREEAEKAATAAMECF-DMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEAR 369
           HG +EA +A +   + F         +P IS+   E+   +    L+       S++E++
Sbjct: 310 HGAKEALEAQSNCEKLFLGYKEKVGEVPEISLK--EIVFPVKFFYLLSALKLFKSSSESK 367

Query: 370 RHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
           R +K   +KI++  + N  L    ++        L  GKK
Sbjct: 368 RSIKGGGVKIDSQKVINPDLVFDSKNDLEGK--ILQIGKK 405


>gi|206602818|gb|EDZ39299.1| Tyrosyl-tRNA synthetase [Leptospirillum sp. Group II '5-way CG']
          Length = 403

 Score =  334 bits (857), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 100/413 (24%), Positives = 181/413 (43%), Gaps = 35/413 (8%)

Query: 9   LSILSERGFIHQISNPRELDILCSQG-----VVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           L IL  RG +  +    +      +       +    G+D T+  LH GH   L  L   
Sbjct: 14  LPILK-RGIV-DLYVEEDFQKKLEKSYKTRIPLKVKAGFDPTSPDLHLGHFVLLKKLRQF 71

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q  GH    ++G  T+ IGDP+ R E R+ +  ++I EN +  +      +K    +   
Sbjct: 72  QDMGHLVQFVVGDFTAFIGDPTGRSEIRKPISPEQIAENAKTYERQVFRVLKQEKTQ--- 128

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            ++ N +W+  +    L+R  G   +V R L  +  + R+     +   E  Y ++Q YD
Sbjct: 129 -VVFNSSWMKKLGVDGLVRLAGLQ-TVARFLERDDFQKRMNERLPIHLHELLYPLMQGYD 186

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLS 242
            V L  +    +++GGSDQ  N++ G DL  + +      LT PLL    G  KM K+L 
Sbjct: 187 SVVLESD----VELGGSDQLFNLLVGRDLLRQHQKEPQAVLTLPLLVGLDGEKKMSKSLR 242

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKII 302
            A+ L     SP   +    +I D+ + S+   LT L     D  ++L      +AK  +
Sbjct: 243 NAVALE---DSPDEMFGRLMSIPDSLIASYTTLLTDLDP---DANSQLH---PRDAKVYM 293

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFA 362
           A  + +  HG + A +A  +  + F      + +P   + + E    + L T++V++G A
Sbjct: 294 ARSVVSQFHGEDNANRAIASFEKVFSRKELPEEIPVFHVREGER---VRLSTVMVQSGAA 350

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            S ++A++ ++  A+  N   + +  + I+ ++        L  GK+ +    
Sbjct: 351 KSESQAKQLIRQGAVDWNGETVQDPFMMIEPKND------LLKVGKRFYCRVQ 397


>gi|318042196|ref|ZP_07974152.1| tyrosyl-tRNA synthetase [Synechococcus sp. CB0101]
          Length = 420

 Score =  333 bits (855), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 89/392 (22%), Positives = 158/392 (40%), Gaps = 32/392 (8%)

Query: 32  SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESR 91
               +   +G D T S +H GH      L   Q  GH  + ++G  T+ IGDP+ +  +R
Sbjct: 43  EGRPLRVKLGIDPTGSDIHLGHSILFRKLRAFQDAGHTAVLIIGDFTARIGDPTGKSATR 102

Query: 92  RMMRSQEIQENIEKIKGIFSS-------FIKYGTGKTDALMLNNETWLCSIKYIDLLREI 144
             + +++++ N                  + + T      +  N  WL S+    ++  +
Sbjct: 103 VQLTAEQVEANAATYLAQLGQGQDPARALLDFETP-GRLEVRRNSEWLASLDLPKVIELL 161

Query: 145 GSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWG 204
           G   +V +ML+ E   +R      +S  EF Y +LQ YD V +  +    L++GG+DQ  
Sbjct: 162 G-ISTVGQMLAKEDFANRYGSGTPISLHEFLYPLLQGYDSVAIQAD----LELGGTDQKF 216

Query: 205 NIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
           N+  G DL         F +  P+L    G  KM K+L   + L+++   P + +     
Sbjct: 217 NVAMGRDLQRHFGQRTQFGMLLPILPGLDGVQKMSKSLGNTVGLSED---PLSMYSKLEK 273

Query: 264 IDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAA 323
           + DA V  +            D   +       E +K +A E+T   HG   A++A   A
Sbjct: 274 VPDAAVEEYL-------TLLTDLDLEALPANPRERQKAMAVEVTRQRHGESAAQQAQADA 326

Query: 324 MECFDM----SIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKI 379
            +              +P  S++   V+       L+   G   S++EARR ++   +K+
Sbjct: 327 GKLVGGASGSGAADADVPEASLAA--VNFPAKAFYLLSAVGVCASSSEARRQIQGGGVKL 384

Query: 380 NNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           +   +S+   +    D  +     L  GKK  
Sbjct: 385 DGEKLSDPNQEFAGPDQLAGK--VLQLGKKTF 414


>gi|297171004|gb|ADI22019.1| tyrosyl-tRNA synthetase [uncultured myxobacterium HF0200_01L06]
          Length = 408

 Score =  333 bits (854), Expect = 4e-89,   Method: Composition-based stats.
 Identities = 97/427 (22%), Positives = 171/427 (40%), Gaps = 31/427 (7%)

Query: 1   MPAFKSDFLSILSER---GFIHQISNPR---ELDILCSQG-VVTAYIGYDLTASSLHAGH 53
           M A + +    L ER   G +  I        L+    +G  +   +G D ++  LH GH
Sbjct: 1   MSAERREVERQL-ERMREGAVDFIGEEELAGRLERALGEGRPLRVKLGMDPSSPDLHLGH 59

Query: 54  LTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSF 113
              L  L   Q+ GH PI L+G  T+ IGDPS + ++R  +  +E+  N        +  
Sbjct: 60  AVVLEKLRIFQELGHTPIFLIGDFTARIGDPSGKKKTRPPLGDKEVTANAATYVSQVAKM 119

Query: 114 IKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLE 173
           +        A +  N  W+ ++   D +R + S  +V+R+L  +    R   +  ++  E
Sbjct: 120 LDAD----AAEIRFNSEWMDAMTPQDFVR-LCSHTTVSRLLERDDFSKRYAAQTPIAVHE 174

Query: 174 FNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTAS 233
           F Y  +QAYD V L    +  +++GG+DQ  N++ G ++           +T PLL    
Sbjct: 175 FLYPFVQAYDSVAL----EADVELGGTDQTFNLLMGREIQRAYGKAPQAVITHPLLVGTD 230

Query: 234 G-TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ- 291
           G  KM K+L  +I L   +  P   +    +I DA +  +   L      E+   +K   
Sbjct: 231 GHEKMSKSLGNSIAL---LDPPEEIYGKIMSISDALLPDYVAMLPIPRNEELLSASKAVV 287

Query: 292 --GKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG 349
               +    K  +A  +    +    +E AA               +     S    +  
Sbjct: 288 SGAGDPLALKHELARRVVERFYDAGSSEGAADHFRRVVQERGKPTEVAQYEYSLA-GAET 346

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
           + LL L+   G A S  E RR +   A+ +++  +S+  L +        G+  L  G++
Sbjct: 347 VSLLDLVDHLGLAGSRGELRRLVSQGAVSVDDERVSDPLLAL------GAGSYLLKLGRR 400

Query: 410 NHIICHL 416
                 +
Sbjct: 401 RFAQVQI 407


>gi|220906293|ref|YP_002481604.1| tyrosyl-tRNA synthetase [Cyanothece sp. PCC 7425]
 gi|219862904|gb|ACL43243.1| tyrosyl-tRNA synthetase [Cyanothece sp. PCC 7425]
          Length = 403

 Score =  333 bits (854), Expect = 4e-89,   Method: Composition-based stats.
 Identities = 98/391 (25%), Positives = 170/391 (43%), Gaps = 23/391 (5%)

Query: 26  ELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPS 85
            L +  +   +    G D T S +H GH   +  L   Q  GH  + ++G  T+ IGDP+
Sbjct: 30  ALRLAQTDRPLRVKFGIDPTGSEVHLGHSIPIRKLRAFQDAGHVAVLIIGDFTARIGDPT 89

Query: 86  FRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIG 145
            + E RR +   E+  N++         + + T      +  N TWL  +  +    E+ 
Sbjct: 90  GKSEVRRQLSEAEVAANVKTYLEQIRPILDFDTPDR-LEIHYNSTWLAKLD-LGQTAELL 147

Query: 146 SFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGN 205
           +  +V +ML+ E    R  +E+ +   EF Y ++Q YD V +  +    +++GG+DQ  N
Sbjct: 148 ATMTVGQMLAKEGFDLRFSKEEPIYLHEFLYPLMQGYDSVAVRSD----VELGGTDQKFN 203

Query: 206 IICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYWRNI 264
           I  G DL         F L  P+L    G  KM K+L+  + L +    P + +     I
Sbjct: 204 IAVGRDLQRHFGLSPQFGLLMPILLGTDGAQKMSKSLNNYVGLQEN---PISMYSKLEKI 260

Query: 265 DDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEA--EKAATA 322
            D  + S+ + LT LP++++            + +K++  EIT   HG   A   +A  A
Sbjct: 261 PDGVIESYFELLTDLPLADLPE-------NPRDRQKLLGVEITRQFHGEAVALQTQAELA 313

Query: 323 AMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNS 382
           AM        ++ +P  S++  +    + L  LI  +G  +S++EARR ++   +K++  
Sbjct: 314 AMVMQGQMGQAELVPEFSLTGQKF--PVPLFYLISASGLVSSSSEARRQIQGGGVKLDGK 371

Query: 383 IISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            I      I            L  GKK  + 
Sbjct: 372 RIEQVDYAIAAPTELEGK--VLQVGKKKFVR 400


>gi|148377992|ref|YP_001256868.1| tyrosyl-tRNA synthetase 1 [Mycoplasma agalactiae PG2]
 gi|254783618|sp|A5IZH1|SYY_MYCAP RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|148292038|emb|CAL59430.1| Tyrosyl tRNA synthetase 1 [Mycoplasma agalactiae PG2]
          Length = 411

 Score =  332 bits (853), Expect = 4e-89,   Method: Composition-based stats.
 Identities = 118/421 (28%), Positives = 210/421 (49%), Gaps = 25/421 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + L  L ER  +  ISN  +   L S      Y+G+D TA SLH G+   + +L   ++ 
Sbjct: 2   NILKDLEERLILKDISNKDKFANL-SPSTTGVYVGFDPTAESLHLGNYILISVLLRFKEY 60

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           G K  +++GG T +IGDPSF+D  R ++ ++ + +N  KIK    SF           ++
Sbjct: 61  GFKTYAVLGGATGMIGDPSFKDSERVLLDNESVNKNKSKIKAQLESF--------GLEVI 112

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           +N  +   +  ++ LR +G   +V+ M++ ESV+ R+  ++ LSF EF Y +LQ +DF++
Sbjct: 113 DNYDFYKDMNVLEFLRNVGKLVNVSYMMAKESVQKRI--QKGLSFTEFTYQLLQGFDFLK 170

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERL--KTPKLFALTSPLLTTASGTKMGKT-LSG 243
             +    ++Q+GGSDQWGNI+ GID+  ++     +   +T  LL+  +G K+GK+   G
Sbjct: 171 TYQELGVKVQLGGSDQWGNIVTGIDMISKVVGDKHEAVGVTVNLLSDENGKKIGKSTGGG 230

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKI 301
           A+W++K M SP+  +QY  +  D+ +       +   +SEI+ + +         EA++ 
Sbjct: 231 ALWIDKNMCSPFKMYQYLLSQKDSRIKELLYWFSFKSVSEINEVLEKHFANPSTQEAQRF 290

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQ-------HMPTISISKDEVSRGMGLLT 354
           +A+E+   + G  E ++A       FD S  +         +    +    + +G  ++ 
Sbjct: 291 LASEVVENIFGANELKQAKNITKILFDKSFDASVLTLNDLEIIENYLPTCPIRQGDSVIE 350

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            ++K  F  S  EAR  +++ A+KI+N  I  +   I               GKK  I+ 
Sbjct: 351 TLIKNKFIVSNREAREFIQAKALKIDNKEIEFDS--IYSPSLFEGKYAFFKKGKKQVILF 408

Query: 415 H 415
            
Sbjct: 409 K 409


>gi|311030916|ref|ZP_07709006.1| tyrosyl-tRNA synthetase 2 [Bacillus sp. m3-13]
          Length = 404

 Score =  332 bits (853), Expect = 5e-89,   Method: Composition-based stats.
 Identities = 94/403 (23%), Positives = 172/403 (42%), Gaps = 26/403 (6%)

Query: 19  HQISNPRELDILCSQG-----VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
            +I N  EL     +       +T  +G D +A  +H GH   L  +  +Q  GHK + +
Sbjct: 17  QEIVNKEELLAKLEKSYESKTPLTVKLGLDPSAPDIHLGHAVVLRKMKQMQDLGHKIVII 76

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
           +G  T  IGDP+ + + R+ +  ++++ N +         +          +  N  WL 
Sbjct: 77  IGDFTGRIGDPTGKAKGRKALSDEQVKLNAQTYCEQIFKVLD----AEKTTVRFNSEWLF 132

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDC 193
            + + ++++ + +  SV R+L  +  + R   +  +   EF Y ++QAYD VE+  +   
Sbjct: 133 KLTFEEVIK-LAATTSVARILERDDFQKRYNSQVPIGIHEFFYPLMQAYDSVEIQAD--- 188

Query: 194 RLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMT 252
            +++GG+DQ  NI+ G  L ++    K  A+  PLL    G  KM K+L   I +N+   
Sbjct: 189 -IELGGTDQTFNILMGRTLQKQWGLEKQVAIFMPLLEGLDGVEKMSKSLGNYIGVNEAAE 247

Query: 253 SPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATEITTMV 310
                ++    + D  ++ + +  T     +I    +   QG    + K  +A  IT + 
Sbjct: 248 V---MFKKVMEVPDELIIKYFELATDEHPDDIHNFVQQLEQGANPRDFKLELAIIITNLY 304

Query: 311 HGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARR 370
            G EE ++A T     F        +P + I        + ++  +V  G   S +E  R
Sbjct: 305 CGEEETKRAITFYETAFSKKEIPDDIPELLIEIG-AETVLAIIPQLVDKGLVKSKSEFMR 363

Query: 371 HLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            +K N +++N   +S     I   D     +  L  GKK  I 
Sbjct: 364 LIKQNGVQLNKEKLS-----IDELDRVLMNDEVLRIGKKRFIR 401


>gi|150865466|ref|XP_001384692.2| tyrosyl-tRNA synthetase [Scheffersomyces stipitis CBS 6054]
 gi|149386722|gb|ABN66663.2| tyrosyl-tRNA synthetase [Scheffersomyces stipitis CBS 6054]
          Length = 552

 Score =  332 bits (852), Expect = 6e-89,   Method: Composition-based stats.
 Identities = 125/465 (26%), Positives = 205/465 (44%), Gaps = 52/465 (11%)

Query: 2   PAFKSDFLSILSERGFIHQISNPRELDILCSQ--GVVTAYIGYDLTASSLHAGHLTQLML 59
           P      +  L  R  +  I++    D+   +       Y G D TA SLH G+L  LM+
Sbjct: 91  PDLDMPLVGHLQSRYLVESITDDALFDLTSPESTKKFKLYCGADPTAESLHLGNLLPLMV 150

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG-- 117
           L      GH  + L+GG T  +GDPS R   R  +  +E ++N+ KI+    +F++ G  
Sbjct: 151 LLHFNLRGHDVVGLVGGATGAVGDPSGRTTERSQIEDKEREDNVSKIQKQLVTFLENGVA 210

Query: 118 ---------TGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQS 168
                     G+   L  NN +W  SI  ++ L + G    V+ ML+ +S++SRLK +  
Sbjct: 211 YAKSRNYPIAGEGRILTANNASWWSSIGMLEFLAKYGRHIRVSSMLARDSIQSRLKDQHG 270

Query: 169 LSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGID----LGERLKTP----- 219
           L F EF Y ILQAYDF  + +     +Q+GG+DQWGNI  GID    L            
Sbjct: 271 LGFNEFTYQILQAYDFWHMFREDGVNMQIGGNDQWGNITAGIDLISRLQRHFGKEGVEPQ 330

Query: 220 KLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTL 279
             + +T PLLT+ +G K GK+   A++++++ T+PY  +QY+ N  D  V    K LT L
Sbjct: 331 SAYGMTVPLLTSPTGEKFGKSAGNAVFIDEKYTTPYQMYQYFINSPDDMVAKLLKTLTLL 390

Query: 280 PMSEIDRM---AKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM 336
           P+S ID            +  A++I+A E+  ++HG    E+ A      F       + 
Sbjct: 391 PLSIIDGYILPKHESDPGLRIAQRILAREVVDLIHGEGVGEEMAYITSFLFPTPDQPFN- 449

Query: 337 PTISISKDEVSRGMGLLTLIVKAGFA-------------------TSTNEARRHLKSNAI 377
              ++S D + +      ++V   F+                    S  E ++ +KS  I
Sbjct: 450 --DTVSADRLIQNFRRSGILVNLKFSEIENIDDLRMSSLLAQITNKSRREVKQLIKSGGI 507

Query: 378 KINNSI--ISNEKLQI---KLQDFDSTGNIKLSFGKKNHIICHLC 417
            +        + +  +   +         + +  GK+N+ +    
Sbjct: 508 YMGLERDQFEDPEDVVLFDRDNHLIDGKLLLVRVGKQNYYVVEFS 552


>gi|148240282|ref|YP_001225669.1| tyrosyl-tRNA synthetase [Synechococcus sp. WH 7803]
 gi|147848821|emb|CAK24372.1| Tyrosyl-tRNA synthetase [Synechococcus sp. WH 7803]
          Length = 414

 Score =  332 bits (852), Expect = 6e-89,   Method: Composition-based stats.
 Identities = 87/387 (22%), Positives = 157/387 (40%), Gaps = 29/387 (7%)

Query: 34  GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRM 93
             +   +G D T SS+H GH      L   Q  GH  + ++G  T+ IGDP+ + ++R  
Sbjct: 43  RPLRVKLGIDPTGSSIHLGHSILFRKLRAFQDAGHTAVLIIGDFTARIGDPTGKSDTRVQ 102

Query: 94  MRSQEIQENIEKIKGIFSS-------FIKYGTGKTDALMLNNETWLCSIKYIDLLREIGS 146
           + ++++  N                  + + T      +  N  WL  +    ++  +G 
Sbjct: 103 LTAEQVDANAATYLAQLGQGQPKDTALLDFETP-GRLEVRRNSEWLEGLDLPAVIGLLG- 160

Query: 147 FFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNI 206
             +V +ML+ +    R      ++  EF Y +LQ YD V +  +    +++GG+DQ  N+
Sbjct: 161 TATVGQMLAKDDFSKRYGSGTPIALHEFLYPLLQGYDSVAVNAD----VELGGTDQKFNV 216

Query: 207 ICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYWRNID 265
             G DL         F L  P+L    G  KM K+L   + L ++   P + +     + 
Sbjct: 217 AMGRDLQRHFGKGTQFGLLLPILVGLDGVQKMSKSLGNTVGLEED---PLSMYSKLEKVG 273

Query: 266 DADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAME 325
           D  +  +   LT L ++ +            E +K +A  +T   HG E A KA   A  
Sbjct: 274 DGAINDYVTLLTNLDLAALPE-------NPREKQKAMALAVTASRHGLEAAAKAQADAAS 326

Query: 326 CFDM-SIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSII 384
                   +  +P  S++  +V+       L+   G   S+++ARR +K  A+++    I
Sbjct: 327 LVGGAGDAAAEVPEASLA--QVNFPAKAFYLLSAVGICASSSDARRQIKGGAVRLEGEKI 384

Query: 385 SNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           ++   +             L  GKK  
Sbjct: 385 TDPNQEFATAAELEGK--VLQLGKKTF 409


>gi|297172840|gb|ADI23803.1| tyrosyl-tRNA synthetase [uncultured gamma proteobacterium
           HF4000_47G05]
          Length = 352

 Score =  332 bits (852), Expect = 6e-89,   Method: Composition-based stats.
 Identities = 85/348 (24%), Positives = 153/348 (43%), Gaps = 17/348 (4%)

Query: 15  RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLM 74
           RG    +     ++ L +   +   +G+D TA  LH GH   +  +   Q  GH+ I L+
Sbjct: 19  RGAEEILVETELIERLENGKSLRVKVGFDPTAPDLHLGHTVLINKMRQFQDLGHEIIFLI 78

Query: 75  GGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCS 134
           G  T +IGDPS ++ +R  +  +EI +N    K      +         ++  N  W   
Sbjct: 79  GDFTGMIGDPSGKNATRPALSREEIDQNALTYKEQVFKILDPDKT----IVDFNSRWGSE 134

Query: 135 IKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCR 194
           +    ++R + S ++V RML  +   +R +  Q ++  EF Y ++Q YD V L  +    
Sbjct: 135 LGAEGMIR-LASRYTVARMLERDDFSTRYRDGQPIAIHEFLYPLMQGYDSVALKAD---- 189

Query: 195 LQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTS 253
           +++GG+DQ  N++ G +L ++        LT PLL    G  KM K+L   + + +    
Sbjct: 190 VELGGTDQKFNLLVGRELQKQYGLEPQIVLTMPLLEGLDGVQKMSKSLGNTVGITEP--- 246

Query: 254 PYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINEAKKIIATEITTMVH 311
           P   +    +I D  +  + + L+  P+++I R+ +         + K  +A EI    H
Sbjct: 247 PVEMYGKLMSISDELMWRYFELLSFRPLADIRRLQEEVTAGINPRDVKYQLAHEIVERFH 306

Query: 312 GREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKA 359
              +AEKA  + +  F        +  + I  D     M +  +I  A
Sbjct: 307 SASDAEKAHQSFVNQFQHGEIPDEIAKVDI--DNQGNDMPVANVIKSA 352


>gi|19075933|ref|NP_588433.1| mitochondrial tyrosine-tRNA ligase (predicted) [Schizosaccharomyces
           pombe 972h-]
 gi|74626920|sp|O74890|SYYM_SCHPO RecName: Full=Tyrosyl-tRNA synthetase, mitochondrial; AltName:
           Full=Tyrosine--tRNA ligase; Short=TyrRS; Flags:
           Precursor
 gi|3687461|emb|CAA21185.1| mitochondrial tyrosine-tRNA ligase (predicted) [Schizosaccharomyces
           pombe]
          Length = 445

 Score =  332 bits (852), Expect = 7e-89,   Method: Composition-based stats.
 Identities = 124/445 (27%), Positives = 194/445 (43%), Gaps = 50/445 (11%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L  L  R  IH  +  +      S  V + Y+G D TA+SLH G+L  LM L      G 
Sbjct: 8   LKQLQARSLIHNTTLLQP-----SCNVNSVYLGADPTAASLHVGNLVALMPLVHFFLNGF 62

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSF--------------I 114
              +++G  T+ +GDPS R  SR+ M       N   I                      
Sbjct: 63  PVFTVIGDATAQLGDPSGRSTSRKQMAETTRTANSNSIHNQLKDLSSSILSYAQDCNYPF 122

Query: 115 KYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEF 174
                 +   ++ N +W  ++K +  L  +G    V++ML+ +SV +RL+    LSF E 
Sbjct: 123 SQMPSSSQWSIVRNSSWYENLKLLKFLSSVGPHVRVSQMLARDSVTTRLQSPSGLSFAEL 182

Query: 175 NYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTAS 233
            Y +LQAYD+  L +N+   LQ+GGSDQWGNI  G DL  R      ++ALT+PLLT++S
Sbjct: 183 TYQLLQAYDYSYLYENHSVNLQIGGSDQWGNITAGTDLVRRTHPNANVYALTTPLLTSSS 242

Query: 234 GTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK 293
           G K+GK+   AIWL+ ++T  Y+ +QY+ +  D         LT LP+ +++++     K
Sbjct: 243 GQKLGKSAGNAIWLDPKLTDSYSLYQYFISAPDDLACKCLDMLTLLPLEQLEQIKAEHEK 302

Query: 294 EI--NEAKKIIATEITTMVHGREEAEKAAT-------AAMECF-------DMSIHSQHMP 337
           +       K +A+ +  MVHG++  E A         A    F               +P
Sbjct: 303 DPSQRIVHKYLASNVVRMVHGKKALELAQIQTKLLHGAHQAPFGFYSEAPQQGDSFPSLP 362

Query: 338 TISI---------SKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEK 388
            I           + D   +      L+      TS  EA  H+ S A+ + +  I +  
Sbjct: 363 EIRALFKDCKFYRTIDSSIKDQPFSRLLRTLQIYTSRKEATEHILSGAVSLGHKPILDSN 422

Query: 389 LQIKLQDFDSTGNIKLSFGKKNHII 413
            +     F       L  GK+  ++
Sbjct: 423 YK-----FPDNSLFVLRAGKRTFVL 442


>gi|189219580|ref|YP_001940221.1| Tyrosyl-tRNA synthetase [Methylacidiphilum infernorum V4]
 gi|189186438|gb|ACD83623.1| Tyrosyl-tRNA synthetase [Methylacidiphilum infernorum V4]
          Length = 386

 Score =  332 bits (851), Expect = 8e-89,   Method: Composition-based stats.
 Identities = 96/402 (23%), Positives = 169/402 (42%), Gaps = 30/402 (7%)

Query: 15  RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLM 74
           RG    ++      +L     +    G D T+ +LH GH   L+ L   Q  GH+ + ++
Sbjct: 10  RGTEQVVTTEELEKLLSLDRRLRIKFGVDPTSPNLHLGHAVSLLKLRQFQDFGHQVLLVI 69

Query: 75  GGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCS 134
           G  T+ IGDPS R+ +R ++  ++I  N +         +     +    +  N  W   
Sbjct: 70  GDFTASIGDPSGRNSTRPVISREQILNNAKTYTDQAFKILDRERTE----IFFNGEWFNE 125

Query: 135 IKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCR 194
           +    LL  +    +VN +L  +    R+ ++QS+   EF Y +LQA+D V++  +    
Sbjct: 126 MSAERLLF-LARRVTVNHLLHRQDFHDRISKDQSIFLHEFFYPLLQAWDSVKICAD---- 180

Query: 195 LQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTS 253
           +++GG DQ  N++ G D  +         +T P+L    GT KM K+L   I L     S
Sbjct: 181 VEIGGKDQIFNMLLGRDFQKDEGMTPQVVMTLPILEGLDGTKKMSKSLGNDIGLT---DS 237

Query: 254 PYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGR 313
           P   +    +I DA +  +   L    +  +            E KK +A +I ++ + +
Sbjct: 238 PKEMFGKTMSISDALMKRWFLVLFGEQLDPL--------CNPMEEKKRLAEKIVSLFYSK 289

Query: 314 EEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLK 373
           EEA KA       F      + MP  S  +    + M ++ L+V  G   S +EARR + 
Sbjct: 290 EEALKARNEFERIFSRREIPEEMPKFSFPQ----KTMPIVELLVAVGAVKSKSEARRLIS 345

Query: 374 SNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
              +      +++    I+L+         L  GK+     +
Sbjct: 346 QGGVDFQGERVTDVHKVIELK-----KGSILKCGKRFFAQVN 382


>gi|322705582|gb|EFY97167.1| tyrosyl-tRNA synthetase [Metarhizium anisopliae ARSEF 23]
          Length = 556

 Score =  332 bits (851), Expect = 8e-89,   Method: Composition-based stats.
 Identities = 116/452 (25%), Positives = 188/452 (41%), Gaps = 56/452 (12%)

Query: 22  SNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSII 81
           S P ++  +     + AY+G D TA SLH GHL   M LFWL   G+  ++L+GG T+ I
Sbjct: 14  STPDKIKEVMRIKRIGAYVGVDPTADSLHIGHLLPFMPLFWLWFHGYPAVTLLGGATARI 73

Query: 82  GDPSFRDESRRMMRSQEIQENIEKIKGIFSSFI--------KYGTGKTDA---LMLNNET 130
           GDP+ R +SR  M + EI +N+ KI    +           KYG  K  A    +LNN  
Sbjct: 74  GDPTGRLQSREHMPNSEISKNVTKIHYQLTRLWRNVVALREKYGYEKDWAAKRHLLNNNM 133

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           WL  +   D  + +     +  MLS E+V+ ++     +S  EF Y + Q +DF  +   
Sbjct: 134 WLQGLSVYDFTKRLARNTRIGPMLSRETVKRKMTEGDGMSLGEFMYPLFQGWDFWHMYNK 193

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLK--------------TPKLFALTSPLLTTASGTK 236
              ++Q+GGSDQ+GNI+ GID  + ++                +    T PLL  ++G K
Sbjct: 194 LGVQMQIGGSDQYGNIVAGIDALKVIRDSEEAPHAKMPTEWQHEPMGFTVPLLLDSAGAK 253

Query: 237 MGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI- 295
            GK+   A+WL++  TSP+  + Y+    D +V    K  T +PM++I         +  
Sbjct: 254 FGKSAGNAVWLDEFKTSPFELYGYFMRRPDDEVEKLLKLFTFMPMAQIQETMTQHCADPS 313

Query: 296 -NEAKKIIATEITTMVHGREEAEKAATAAMECFDMS--------------IHSQHMPTIS 340
              A+  +A E+ ++V+G + A + A      F                 +   + P   
Sbjct: 314 KRVAQHTLAFEVLSLVYGSQRALQEAQQHKFRFGGELPHVINEPSKDSGIVTPNNAPRSD 373

Query: 341 ISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI--------- 391
           I        +    L+   G A+S ++ +R +      +         L           
Sbjct: 374 IQLPRSVMKLSPAKLLFATGLASSNSDGQRLVSQQGAYVAAQPGQTRGLVPGNLSWTPMK 433

Query: 392 ------KLQDFDSTGNIKLSFGKKNHIICHLC 417
                   +       + L  GK N  I  L 
Sbjct: 434 MWFPEETAKYLIDEKILILRKGKHNVRIVELV 465


>gi|289621439|emb|CBI52222.1| unnamed protein product [Sordaria macrospora]
          Length = 692

 Score =  331 bits (850), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 124/489 (25%), Positives = 209/489 (42%), Gaps = 76/489 (15%)

Query: 5   KSDFLSILSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           K     +  ERG++   +   E +  L     + AY+G D TA SLH GHL  LM LFW+
Sbjct: 64  KQGTWDLFKERGYVKDTAGKDEQIAELMRTRRIGAYVGIDPTAPSLHVGHLLPLMPLFWM 123

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
              G+K  +L+GG T+ IGDP+ R  SR  + S +   N+ KI        +    +  A
Sbjct: 124 YLEGYKAFTLIGGSTAKIGDPTGRLTSRDKLSSSDATMNMTKIHYQLKKLWENVDIQMRA 183

Query: 124 L-----------MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFL 172
                       ++NN  W      +++LR +G    V  MLS ++V++++ +   +SF 
Sbjct: 184 RGYEADWARMRGIVNNNHWWNKQPMLEVLRRVGQALRVGPMLSRDTVKNKMTKGDGVSFA 243

Query: 173 EFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT-------------- 218
           EF+Y I+Q +D+ EL      ++Q+GGSDQ+GNII G+++ +  +               
Sbjct: 244 EFSYPIMQGWDWFELFYQRGVQMQIGGSDQYGNIISGLEVVKAARDSEPDPQERQHIVPK 303

Query: 219 ---PKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKR 275
               +    T PLLT +SG K GK+   AIWL+   TS ++F+ Y+    D +V    K 
Sbjct: 304 TVMDECVGFTVPLLTDSSGAKFGKSAGNAIWLDPYQTSVFDFYGYFVRRTDEEVEKLLKL 363

Query: 276 LTTLPMSEIDRMAKLQGKEI--NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS 333
            T +P SEI ++ +   K+     A+  +A E+ T+VHG++EA  A       +   + +
Sbjct: 364 FTFMPTSEITKVMEEHVKDPSKRVAQHALAREVATLVHGQQEATAAEKQHRLMYSGQMAN 423

Query: 334 QHMPTIS---------------------------ISKDEVSRGMGLLTLIVKAGFATSTN 366
             +P +                            I  + +  G  +  ++  AG A+ST 
Sbjct: 424 PQVPRLKDAITGGDPYKVIPGQQVTWNNAPRIDMILPESLIMGKSIGRILYAAGLASSTT 483

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQD------------------FDSTGNIKLSFGK 408
           E  +   +    +  +  + +       D                        + L  GK
Sbjct: 484 EGHKLAAAQGCYVGGAYTAGKDNVTMSPDLVSFMPVKLWFPGETQRYLIDGNLLILRKGK 543

Query: 409 KNHIICHLC 417
            N  +  + 
Sbjct: 544 HNVRVIKMV 552


>gi|123966723|ref|YP_001011804.1| tyrosyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9515]
 gi|123201089|gb|ABM72697.1| Tyrosyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9515]
          Length = 412

 Score =  331 bits (849), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 91/387 (23%), Positives = 179/387 (46%), Gaps = 28/387 (7%)

Query: 32  SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESR 91
           ++  +   +G D T + +H GH      L   Q  GH  + ++G  T+ IGDP+ ++++R
Sbjct: 38  NKKKLRVKLGIDPTGTDIHLGHSILFRKLRAFQDNGHVAVLIIGDFTAQIGDPTGKNKTR 97

Query: 92  RMMRSQEIQENIEKIKGIF-------SSFIKYGTGKTDALMLNNETWLCSIKYIDLLREI 144
             +  +E++EN +              S + + +      +  N  WL ++    ++  +
Sbjct: 98  VQLSEEEVKENSKTYLNQLGMGKSSDKSILDFESEDR-IEIRYNSEWLKNLDLNSIIELM 156

Query: 145 GSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWG 204
           G   +V++ML+ E    R   +  ++  EF Y +LQ YD V +  +    +++GG+DQ  
Sbjct: 157 GRS-TVSQMLAKEEFNKRYNDQTPIALHEFLYPLLQGYDSVIVNSD----IELGGTDQKF 211

Query: 205 NIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
           NI  G DL    K    + +  P+LT   G  KM K+    + L+++     + +     
Sbjct: 212 NIAIGRDLQRHFKKEPQYGILLPILTGLDGIKKMSKSEFNTVGLSEDSL---SMYSKLEK 268

Query: 264 IDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAA 323
           + D  + S+ + LT L +S I            + ++++A E+T++ HG++EA KA +  
Sbjct: 269 VPDQLIPSYFELLTELDLSFIKET------NPRDLQRLMALEVTSLYHGKKEALKAQSNC 322

Query: 324 MECF-DMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNS 382
            + F  +      +P IS+   E+   + L  L+       S++E++R +K   +KI+++
Sbjct: 323 EKIFLGLKEKVGDIPIISLK--EIVFPVKLFYLLSSLNLFKSSSESKRSIKGGGVKIDSN 380

Query: 383 IISNEKLQIKLQDFDSTGNIKLSFGKK 409
            + N  L    ++        L  GKK
Sbjct: 381 KLVNPDLVFDSKEALKGK--ILQIGKK 405


>gi|302924178|ref|XP_003053830.1| hypothetical protein NECHADRAFT_103243 [Nectria haematococca mpVI
           77-13-4]
 gi|256734771|gb|EEU48117.1| hypothetical protein NECHADRAFT_103243 [Nectria haematococca mpVI
           77-13-4]
          Length = 608

 Score =  331 bits (849), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 128/466 (27%), Positives = 202/466 (43%), Gaps = 57/466 (12%)

Query: 8   FLSILSERGFIHQIS-NPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
              IL ERG+I  ++ +P ++  +     +  Y+G D TA SLH GHL  LM LF L   
Sbjct: 56  VWDILQERGYIKDVAGDPEKIKEIMRVKRIGTYVGIDPTADSLHVGHLLPLMPLFLLWFH 115

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSF--------IKYGT 118
           GH  ++L+GG T+ IGDP+ R ESR ++ + EI +NI K+    +          IKYG 
Sbjct: 116 GHPAVTLIGGSTARIGDPTGRLESRELITNSEISKNITKMHVQLTKLWTNVQHLRIKYGY 175

Query: 119 GKTDA---LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFN 175
            K  A    +LNN  WL S+   D  + I     +  ML  E+V+ ++     +S  EF 
Sbjct: 176 EKDWAAKHHLLNNNMWLGSLTLYDFAKRIARHTRIGPMLGKETVKRKMTEGDGMSLGEFI 235

Query: 176 YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL---GERLKTPK-----------L 221
           Y +LQ +DF  +      ++Q+GGSDQ+GNI  GID        +               
Sbjct: 236 YPLLQGWDFWHMYNKLGIQMQIGGSDQYGNITAGIDALKTIRDTEEAPHLKMPTTWEYEP 295

Query: 222 FALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPM 281
              T PLLT +SG K GK+   AIWL++  TS ++ + Y+    D +V    K  T +P+
Sbjct: 296 MGFTVPLLTDSSGAKFGKSAGNAIWLDEFKTSAFDLYGYFVRRSDEEVERLLKLFTFMPL 355

Query: 282 SEIDRMAKLQGKEI--NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS-QHMPT 338
             I +  +          A+  +A E+ +++HG ++A + A      F   + S  + PT
Sbjct: 356 ESITKTMEQHRVNPQQRVAQHTLAFEVVSLIHGSQKALQEAKQHEFRFGGKLPSVVNEPT 415

Query: 339 IS--------ISKDEVSRGMGL-----LTLIVKAGFATSTNEARRHLKSNAIKINNSIIS 385
                       + ++     +       ++  +G A+S++E +R L      I      
Sbjct: 416 EETGIVTSNNAPRSDIKLPRSIMQSSPAKILFASGLASSSSEGQRLLSQQGAYIAAQPGQ 475

Query: 386 NEKLQI---------------KLQDFDSTGNIKLSFGKKNHIICHL 416
              L                   +       + L  GK N  I  L
Sbjct: 476 KRGLVPGNLSWTPMKAWFPEETSKFLIDDCMLILRKGKHNVRIVEL 521


>gi|87301176|ref|ZP_01084017.1| tyrosyl-tRNA synthetase [Synechococcus sp. WH 5701]
 gi|87284144|gb|EAQ76097.1| tyrosyl-tRNA synthetase [Synechococcus sp. WH 5701]
          Length = 411

 Score =  330 bits (847), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 95/392 (24%), Positives = 156/392 (39%), Gaps = 30/392 (7%)

Query: 32  SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESR 91
           +Q  +   +G D T S +H GH      L   Q  GH  + ++G  T+ IGDPS R  +R
Sbjct: 39  AQRPLRIKLGIDPTGSDIHLGHSILFRKLRAFQDAGHTAVLIIGDFTARIGDPSGRSATR 98

Query: 92  RMMRSQEIQENIEKIKGIF-------SSFIKYGTGKTDALMLNNETWLCSIKYIDLLREI 144
             + + E++ N +              S + + T      +  N  WL  +    ++  +
Sbjct: 99  VQLSAAEVEANADTYLVQLGLGQPPEQSLLDF-TTPGRLEVRRNSEWLAGLDLPQVIELL 157

Query: 145 GSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWG 204
           G+  +V +ML+ E   +R      +S  EF Y +LQ YD V +A +    L++GG+DQ  
Sbjct: 158 GTS-TVGQMLAKEEFANRYGSGTPISLHEFLYPLLQGYDSVAVASD----LELGGTDQKF 212

Query: 205 NIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
           N+  G DL         F L  P+L    G  KM K+L   + L      P   +     
Sbjct: 213 NVAMGRDLQRHFGQRPQFGLLLPILPGLDGVQKMSKSLGNTVGL---KEGPLAMYSKLEK 269

Query: 264 IDDADVVSFAKRLTTLPMSEIDRMAKLQGKE-INEAKKIIATEITTMVHGREEAEKAATA 322
           + DA    +   LT L                  E +K +A  IT   HG E A  A   
Sbjct: 270 VPDAVAEQYLTLLTDLDPD--------HWPTSPRERQKALALAITAARHGLEAASAAQAD 321

Query: 323 AMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNS 382
           A       + +Q +P  S++   V+       L+   G   S++EARR ++   ++++  
Sbjct: 322 AANLVAGEMAAQTVPETSLAP--VTFPAKAFHLLSALGLCASSSEARRQIQGGGVRLDGE 379

Query: 383 IISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            +++                 L  GKK  +  
Sbjct: 380 KLTDVNRSFSAASELEGR--VLQLGKKTFLRL 409


>gi|56751549|ref|YP_172250.1| tyrosyl-tRNA synthetase [Synechococcus elongatus PCC 6301]
 gi|81301379|ref|YP_401587.1| tyrosyl-tRNA synthetase [Synechococcus elongatus PCC 7942]
 gi|81561905|sp|Q5N1U0|SYY_SYNP6 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|115305825|sp|Q31K19|SYY_SYNE7 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|56686508|dbj|BAD79730.1| tyrosyl tRNA synthetase [Synechococcus elongatus PCC 6301]
 gi|81170260|gb|ABB58600.1| tyrosyl-tRNA synthetase [Synechococcus elongatus PCC 7942]
          Length = 402

 Score =  330 bits (846), Expect = 3e-88,   Method: Composition-based stats.
 Identities = 91/386 (23%), Positives = 167/386 (43%), Gaps = 22/386 (5%)

Query: 33  QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRR 92
              +   +G D T S +H GH      L   Q  GH  + ++G  T+ IGDP+ + E RR
Sbjct: 37  DRPLRIKLGIDPTGSDIHLGHSIIFRKLRQFQDAGHTAVLIIGDFTARIGDPTGKSEVRR 96

Query: 93  MMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNR 152
            + ++++Q N E         + + T      +  N  WL  +    +L  +G   +V +
Sbjct: 97  QLTAEDVQRNAETYLDQLRPILDFETP-GRLEIRYNSEWLAGLDLAKILELLG-TMTVGQ 154

Query: 153 MLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL 212
           ML+ E    R  +   +   EF Y ++Q YD V +  +    +++GG+DQ  NI  G DL
Sbjct: 155 MLAKEGFSERYDKGTPVYLHEFLYPLMQGYDSVAVQSD----VELGGTDQKFNIAVGRDL 210

Query: 213 GERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVS 271
                    F L  P+L    G  KM K+L   + LN++     + +     + DA V  
Sbjct: 211 QRHFGLQPQFGLLLPILIGLDGSQKMSKSLGNYVGLNEDAL---SMYSKLEKVPDALVAD 267

Query: 272 FAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMS- 330
           + + LT+  ++ +            + +K++A ++ +  HG E A  A  AA E    S 
Sbjct: 268 YFELLTSQDLAALPE-------NPRDRQKLLALDVVSQYHGAEAAAAAQKAAQELVQGSA 320

Query: 331 IHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQ 390
           + ++ +P   +S  +V+       L+   G   +++EARR ++  A++++   + +    
Sbjct: 321 VQAEAVPEFPLS--QVNFPAKAFYLVSAVGLGLTSSEARRQIQGGAVRLDGQKLDDPNHI 378

Query: 391 IKLQDFDSTGNIKLSFGKKNHIICHL 416
            +           +  GKK  +   L
Sbjct: 379 FEAPTALKGR--VIQVGKKKFVRLVL 402


>gi|15828956|ref|NP_326316.1| tyrosyl-tRNA synthetase 1 (tyrosine--tRNA ligase) (TyrRS 1)
           [Mycoplasma pulmonis UAB CTIP]
 gi|81532900|sp|Q98Q81|SYY_MYCPU RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|14089899|emb|CAC13658.1| TYROSYL-TRNA SYNTHETASE 1 (TYROSINE--TRNA LIGASE) (TYRRS 1)
           [Mycoplasma pulmonis]
          Length = 414

 Score =  329 bits (845), Expect = 4e-88,   Method: Composition-based stats.
 Identities = 126/426 (29%), Positives = 225/426 (52%), Gaps = 24/426 (5%)

Query: 1   MPAFK-SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLML 59
           M   K    +  L +R   + I++  ++D++     +  Y+G+D TA SLH G+  Q++ 
Sbjct: 1   MSQNKLKTLIEELKKRKVFNNITSEEKVDLITLDHGI--YVGFDPTAISLHLGNYIQMVN 58

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG 119
           L   Q  G K I+++GG TS+IGDPSF+D  R+++ ++ I EN + I+    +F      
Sbjct: 59  LKRFQNVGFKTIAILGGATSMIGDPSFKDSERKLLSNETILENKKHIRKQLENF------ 112

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
                +++N  +   +  +D LR +G FF+V+ M+S +SV +R++    LSF EF+Y  L
Sbjct: 113 --GFKVIDNLDFYKDMNILDYLRSVGKFFNVSTMMSRDSVANRIQS--GLSFTEFSYQTL 168

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKM 237
           QAYDF  L +  +  +Q+GGSDQWGN++ G+D   +  +       +T  LL  ++G K+
Sbjct: 169 QAYDFKVLCEKENVMMQLGGSDQWGNLVSGLDFINKTLSKNLPTIGITMNLLVDSNGNKI 228

Query: 238 GKTLSGA-IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI- 295
           GK+  GA +W++K +TSPY  +QY  N +D D  +   +LT L +SEI+R+     K   
Sbjct: 229 GKSTGGASLWIDKTLTSPYVLYQYLLNTNDDDAYNLLLQLTFLQLSEIERIKNEHLKNPK 288

Query: 296 -NEAKKIIATEITTMVHGREEAEKAATAAMECFDM-----SIHSQHMPTISISKDEVSRG 349
               +  ++ E+   +HG+EEA++A   +   F       ++  + +  +  S D V   
Sbjct: 289 LRLMQSRLSFEVVKDIHGKEEAQRALHISTSLFKEKNSWFNLSLEDLIQLKGSVDFVPFK 348

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
             L   +V +   +S  E    ++  ++KIN   ++     +  +++D    + L  GKK
Sbjct: 349 DDLFLTLVDSKIISSKREFNEFVRDKSLKINGQDVTGLDYDLPWENYD-NKYLILKKGKK 407

Query: 410 NHIICH 415
            + + +
Sbjct: 408 QYWVIY 413


>gi|225679779|gb|EEH18063.1| tyrosyl-tRNA synthetase [Paracoccidioides brasiliensis Pb03]
          Length = 1567

 Score =  329 bits (844), Expect = 5e-88,   Method: Composition-based stats.
 Identities = 119/518 (22%), Positives = 212/518 (40%), Gaps = 106/518 (20%)

Query: 5    KSDFLSILSERGFIHQIS-NPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
            +  FL ++ ERG ++Q+  +   L+ + ++  V  Y+G D TA SLH GH+   M+L W 
Sbjct: 1019 RKSFLELMEERGLVNQVVGDRDALNKMWTERRVGVYVGVDPTAPSLHIGHMLPFMVLAWA 1078

Query: 64   QKTGHKPISLM----------------GGGTSIIGDPSFRDESRRMMRSQEIQENIEKIK 107
               G + + L+                GG TS IGDP+ R+  R        +EN+  + 
Sbjct: 1079 YVHGIRSVFLVSTCCFYALPHYILVQLGGSTSQIGDPTDREAPRAKQARITRKENMVNMH 1138

Query: 108  GIFSSF----IKYGTGKTDAL-------MLNNETWLCSIKYIDLLREIGSFFSVNRMLSF 156
                 F     +YG     A        ++NN  W     ++++++ +G    +  ML  
Sbjct: 1139 LQLRIFGMSIERYGAKHGYAYEPIWRRAIVNNNAWWLKAPFMEVMKTMGESVRLGPMLGR 1198

Query: 157  ES------------------VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMG 198
            ++                  V++RL+  + +S  EF Y +LQA+D+ +L +  +  +Q+G
Sbjct: 1199 DTILLGVFRTRAADTIRLCSVKNRLQSGKGMSLAEFTYPLLQAWDWWQLIQQQNILVQVG 1258

Query: 199  GSDQWGNIICGIDLGERLKTP------------------KLFALTSPLLTTASGTKMGKT 240
            GSDQ GNI  G+D  + L                     +    T+PLLTT SG K GKT
Sbjct: 1259 GSDQAGNIQFGMDATKALMKADRDYWRKHAPNPEDREILEPMGFTTPLLTTPSGEKFGKT 1318

Query: 241  LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEA 298
               A+WL+K+MT  ++ +Q++  + D +V  + K  T L +  I ++     ++     A
Sbjct: 1319 AGNAVWLDKDMTPTFDLYQFFIRVPDENVEQYLKYFTFLSIPTIKKIMVQHMEDPSKRVA 1378

Query: 299  KKIIATEITTMVHGREEAEKAATAAMECFD---MSIHSQHM------------------- 336
            +  +A+E   ++ G  EA +A       F        S  +                   
Sbjct: 1379 QHKLASEFVELMRGPAEAAQAEKDHRSLFGSLFGGQVSTALEMEARPKRDINLSETSPFR 1438

Query: 337  ---PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKI----NNSIISNEKL 389
               P +++ +  +  G     ++  AG A+S  EA R +  N   +    ++  + ++KL
Sbjct: 1439 VPSPHVTLPRS-LVVGQFFHKVLWSAGLASSKAEAMRLILQNGAAVASRSDSKAVMDDKL 1497

Query: 390  QI----------KLQDFDSTGNIKLSFGKKNHIICHLC 417
                          +       + L  GK    I  + 
Sbjct: 1498 SYVPIKTWNKDETAKFIIDDSLLILRIGKWKVKIVKIV 1535


>gi|116071219|ref|ZP_01468488.1| tyrosyl-tRNA synthetase [Synechococcus sp. BL107]
 gi|116066624|gb|EAU72381.1| tyrosyl-tRNA synthetase [Synechococcus sp. BL107]
          Length = 415

 Score =  329 bits (843), Expect = 6e-88,   Method: Composition-based stats.
 Identities = 92/403 (22%), Positives = 156/403 (38%), Gaps = 29/403 (7%)

Query: 18  IHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGG 77
           + Q    R          +   +G D T S++H GH      L   Q  GH  + ++G  
Sbjct: 28  VDQSLAARLAAAEAEGRPLRVKLGIDPTGSNIHLGHSILFRKLRAFQDAGHTAVLIIGDF 87

Query: 78  TSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSS-------FIKYGTGKTDALMLNNET 130
           T+ IGDP+ +  +R  +   ++  N                  + + T      +  N  
Sbjct: 88  TARIGDPTGKSATRVQLSKNDVAVNASTYLRQLGQDQPKATALLDFETP-GRLEVRYNSE 146

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           WL  +    ++  +G   +V +ML+ E   +R      ++  EF Y +LQ YD V +  +
Sbjct: 147 WLEGMDLPAVIGLLG-TGTVGQMLAKEDFSNRYSSGTPIALHEFLYPLLQGYDSVAVNAD 205

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNK 249
               +++GG+DQ  N+  G DL         F L  P+L    G  KM KTL   + L +
Sbjct: 206 ----VELGGTDQKFNVAMGRDLQRHFGRGTQFGLLLPILVGLDGAQKMSKTLGNTVGLEE 261

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTM 309
           +   P + +     + DA +  +   LT L +  +            E +K +A  +T  
Sbjct: 262 D---PLSMYSKLEKVGDAAINDYVTLLTDLNVEVLPE-------NPREKQKAMALAVTAT 311

Query: 310 VHGREEAEKAATAAMECFDM-SIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
            HG + A KA   A          S  +P  S+    V+       L+   G   S++EA
Sbjct: 312 RHGMDAAAKAQLDAANLVGGAGDASADVPEASL--LSVNFPAKAFYLMSAVGICASSSEA 369

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           RR +K  A +++   I++   +             L  GKK  
Sbjct: 370 RRQIKGGAARLDGDKITDPNQEFATAAELDGR--VLQVGKKTF 410


>gi|325955545|ref|YP_004239205.1| Tyrosyl-tRNA synthetase [Weeksella virosa DSM 16922]
 gi|323438163|gb|ADX68627.1| Tyrosyl-tRNA synthetase [Weeksella virosa DSM 16922]
          Length = 401

 Score =  329 bits (843), Expect = 7e-88,   Method: Composition-based stats.
 Identities = 101/419 (24%), Positives = 177/419 (42%), Gaps = 30/419 (7%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLML 59
           +   K +   IL E G        ++L     +   +   +G+D TA  LH GH   L  
Sbjct: 2   IEELKENVEIILPENGL------EQKLKQAKEENRKLIIKLGFDPTAPDLHLGHAVVLKK 55

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG 119
           L   Q  GH+ + L+G  T+ IGDP+ ++++R+ + ++E+Q N +      S  I     
Sbjct: 56  LKQFQDLGHQVVILVGSFTARIGDPTGKNKARKPLSAEEVQHNAQTYINQLSKIIDVEKT 115

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
           K    ++ N TWL  + +  ++ E+ S  +V +++       R      ++  E  Y IL
Sbjct: 116 K----IVYNSTWLDGLSFSAII-ELLSRVTVAQLMHRNDFNKRFTENTPIAMHELVYPIL 170

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMG 238
           Q YD  ++  +    ++MGG+DQ  N   G  L E  +      +  PLL    G  KM 
Sbjct: 171 QGYDSTQIKAD----IEMGGTDQLFNCTMGRQLQESYEVSPQIVMCMPLLRGLDGKEKMS 226

Query: 239 KTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEIN 296
           K+++  I L  E   P   +    +I D  +  +    T   + E +++      G    
Sbjct: 227 KSMNNIIGLTDE---PNEMFGKTMSIPDDLLEEYINLATDFSIEEKEQLKNRIASGDNPM 283

Query: 297 EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPT-ISISKDEVSRG--MGLL 353
           + KKI+A  I T  H  E AE A       F      + +   + I+  +      M LL
Sbjct: 284 KIKKIVAKNIITQYHNAEAAEGAEVFFSTQFQNKNFDEKVFEPVKINTLQNIENNRMSLL 343

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
            L  +    +S +  RR ++   I+I+N   ++    I L++      +K+  GK+   
Sbjct: 344 DLCHQLKKDSSRSAVRRLIEGGGIQIDNEKRTDANESIVLKN-----GMKIKIGKRTFY 397


>gi|320591092|gb|EFX03531.1| tyrosyl-tRNA synthetase [Grosmannia clavigera kw1407]
          Length = 650

 Score =  328 bits (842), Expect = 8e-88,   Method: Composition-based stats.
 Identities = 115/484 (23%), Positives = 203/484 (41%), Gaps = 75/484 (15%)

Query: 9   LSILSERGFIHQIS-NPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
             I  ERG++  ++ N  ++  L +Q  + AY+G D TA S+H GHL  LM LFW+   G
Sbjct: 73  WDIFEERGYVKDVAGNREDIRKLLTQKRIGAYVGIDPTAPSMHVGHLLPLMPLFWMYMHG 132

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFI--------KYGTG 119
           ++ ++L+GG T  IGDP+ R +SR  +++  +  N+ K+                +YG  
Sbjct: 133 YRAVTLLGGATGKIGDPTDRLQSRAELKNATVAMNMVKMHYQLKKLWVNVEAQARRYGYE 192

Query: 120 KTDAL---MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNY 176
           KT A    +L N  W   +  +++L+ +G+   +  MLS ++VR +L     +SF EF+Y
Sbjct: 193 KTWAWRRGVLQNGHWWNKLPMLEILQRLGAGLRIGPMLSRDTVRRKLTEGDGMSFAEFSY 252

Query: 177 MILQAYDFVELAKNYDCRLQMGGSDQWGNIICGID---LGERLKTPKL-----------F 222
            ++QA+D+  +  +   ++Q+GGSDQ+GNI+ G D   +    +                
Sbjct: 253 PLMQAWDWWHMYISQGIQMQIGGSDQYGNIVTGADAFKIIRASEPNPALKLSSGLLHDPV 312

Query: 223 ALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMS 282
             T PLLT +SG K GK+   AIWL++  T  ++ + Y+    DADV +  +  T +P+ 
Sbjct: 313 GFTVPLLTDSSGAKFGKSAGNAIWLDRFQTPTFDLYGYFVRRPDADVEALLRLFTFIPLD 372

Query: 283 EIDRMAKLQGKEI--NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS------- 333
            I  + +    +     A+  +A E+  +VHG E A +A       +D    +       
Sbjct: 373 RITALMEDHTVDPARRLAQHTLAFEVVALVHGLELATEARDRHRAMYDKKKLTNQNDGDD 432

Query: 334 --------------------QHMPTISISK-DEVSRGMGLLTLIVKAGFATSTNEARRHL 372
                                  P + +     + R   +  ++  AG   S +E  R  
Sbjct: 433 AIMATTSATTVATDAYPRTLNQAPQVDLQLPAALFRAGKVARILYAAGMVKSVSEGNRLA 492

Query: 373 KSNAIKIN-----------NSIISNEKLQI--------KLQDFDSTGNIKLSFGKKNHII 413
                 +               ++                        + L  G+ N  +
Sbjct: 493 IQKGAYVGASPGQTAHHNKGMPLTQVDFTPVHLWYPEDTKNFIIDEKYMVLRKGQHNVRV 552

Query: 414 CHLC 417
             + 
Sbjct: 553 IEIV 556


>gi|330719863|gb|EGG98350.1| Tyrosyl-tRNA synthetase [gamma proteobacterium IMCC2047]
          Length = 342

 Score =  328 bits (842), Expect = 9e-88,   Method: Composition-based stats.
 Identities = 84/361 (23%), Positives = 159/361 (44%), Gaps = 22/361 (6%)

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG 119
           +   Q  GH+ + L+G  T +IGDP+ ++ +R+ +  +++ EN +  K      +     
Sbjct: 1   MRQFQDLGHEVLFLIGDFTGMIGDPTGKNVTRKPLTPEQVAENAKTYKEQVFKILD---- 56

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
                ++ N  W+  +   DL+ ++ +  SV RML  +  + R   +QS++  EF Y ++
Sbjct: 57  PEKTQVVFNSEWMGKMNAADLI-QLAAQQSVARMLERDDFKKRYANQQSIAIHEFLYPMI 115

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMG 238
           Q YD V L  +    L++GG+DQ  N++ G +L +         +T P+L    G  KM 
Sbjct: 116 QGYDSVALKAD----LELGGTDQKFNLLMGRELQKHFGQTPQVVMTLPILEGLDGVQKMS 171

Query: 239 KTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM--AKLQGKEIN 296
           K+L+  I ++     P   ++   ++ D  +  + + L+  PMSEI++       G    
Sbjct: 172 KSLNNYIGVS---DMPGEMYRKIISMPDDLIWRYFELLSFRPMSEIEQFKAEVEAGANPQ 228

Query: 297 EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLI 356
             K  +A EI    HG+E AE A   A          + +P + ++    +  M +  ++
Sbjct: 229 PVKVKLAEEIVERFHGKEAAENAHKGAGNTLRAGEIPEDLPEVEVATAGQAE-MPISAVL 287

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             A    ++N AR  L   A+ ++          +K     +   + +  GKK      L
Sbjct: 288 RMAKLVANSNAARDVLGRGAVYVDGQPCE---ATLK---LAAGSEVVIQAGKKKIARVKL 341

Query: 417 C 417
            
Sbjct: 342 V 342


>gi|85118241|ref|XP_965416.1| tyrosyl-tRNA synthetase, mitochondrial precursor [Neurospora crassa
           OR74A]
 gi|1351183|sp|P12063|SYYM_NEUCR RecName: Full=Tyrosyl-tRNA synthetase, mitochondrial; AltName:
           Full=Tyrosine--tRNA ligase; Short=TyrRS; Flags:
           Precursor
 gi|168924|gb|AAA33620.1| tyrosyl-tRNA synthetase [Neurospora crassa]
 gi|28927224|gb|EAA36180.1| tyrosyl-tRNA synthetase, mitochondrial precursor [Neurospora crassa
           OR74A]
 gi|38566964|emb|CAE76265.1| tyrosine--trna ligase precursor, mitochondrial (cyt-18) [Neurospora
           crassa]
          Length = 669

 Score =  328 bits (842), Expect = 9e-88,   Method: Composition-based stats.
 Identities = 126/489 (25%), Positives = 214/489 (43%), Gaps = 76/489 (15%)

Query: 5   KSDFLSILSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           K +   +  ERG++   +  +E +  L     + AY+G D TA SLH GHL  LM LFW+
Sbjct: 64  KQNTWDLFEERGYVKDTAGTKEHIAELMRTRRIGAYVGIDPTAPSLHVGHLLPLMPLFWM 123

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
              G+K  +L+GG T+ IGDP+ R +SR  + S +   N+ KI        +    +  A
Sbjct: 124 YLEGYKAFTLIGGSTAKIGDPTGRLKSRDHLSSSDATMNMTKIHYQLKKLWENVDTQMRA 183

Query: 124 L-----------MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFL 172
                       ++NN  W      +++LR +G    +  MLS ++V++++ +   +SF 
Sbjct: 184 RGYEADWARKRGIVNNNHWWNKQPMLEVLRRVGHALRIGPMLSRDTVKNKMTQGDGVSFA 243

Query: 173 EFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT-------------- 218
           EF Y I+Q +D+ EL      ++Q+GGSDQ+GNII G+++ +  +               
Sbjct: 244 EFTYPIMQGWDWFELFYQQGVQMQIGGSDQYGNIISGLEVVKAARESEPDPQERKYVTPK 303

Query: 219 ---PKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKR 275
               +    T PLLT +SG K GK+   AIWL+   TS ++F+ Y+    D +V +  K 
Sbjct: 304 TALDECVGFTVPLLTDSSGAKFGKSAGNAIWLDPYQTSVFDFYGYFVRRSDQEVENLLKL 363

Query: 276 LTTLPMSEIDRMAKLQGKEI--NEAKKIIATEITTMVHGREEAEKAATAAMECF------ 327
            T +P+SEI +  +   K+     A+  +A E+ T+VHG++EA  A       +      
Sbjct: 364 FTFMPISEITKTMEEHIKDPSKRVAQHTLAREVVTLVHGKQEASAAEDQHRMMYTGQMTI 423

Query: 328 --------------------DMSIHSQHMPTIS-ISKDEVSRGMGLLTLIVKAGFATSTN 366
                               D  +   + P I  I  + +  G  +  ++  AG A+ST 
Sbjct: 424 PQVSRAKDAATGGDQYKTISDQPVTLNNAPRIDMILPESLIMGKSIGRILYAAGLASSTT 483

Query: 367 EARRHLKSNAIKI------NNSIIS-NEKLQI-----------KLQDFDSTGNIKLSFGK 408
           E  +   +    +          ++ N  L               +   +   + L  GK
Sbjct: 484 EGHKLAAAQGCYVGGAHRAGGENVTMNPDLISFMPVKLWFPGETQRYLINGNLLILRKGK 543

Query: 409 KNHIICHLC 417
            N  +  + 
Sbjct: 544 HNVRVIQMV 552


>gi|154275574|ref|XP_001538638.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
 gi|150415078|gb|EDN10440.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
          Length = 490

 Score =  328 bits (841), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 113/442 (25%), Positives = 202/442 (45%), Gaps = 62/442 (14%)

Query: 3   AFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
             +  FL ++ ERG ++ +        + ++  V  Y+G D TA SLH GH+   M+L W
Sbjct: 24  GTRKSFLELMEERGLVNAVIG------MWTERRVGVYVGVDPTAPSLHIGHMLPFMVLAW 77

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSF--------I 114
               G + + L+GG TS IGDP+ R   R  M S   +EN+  +                
Sbjct: 78  AYVHGIRAVFLLGGSTSQIGDPTDRLGPRAKMASFTRKENMANMHLQLKRLGMSIERYGA 137

Query: 115 KYGTGKTDAL---MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSF 171
           K+G          ++NN TW     + ++++ +G    +  ML  ++V++RL+  + ++ 
Sbjct: 138 KHGYEYEWIWRRAIVNNNTWWLKEPFFEVMKTMGESVRLGPMLGRDTVKNRLQSGKGMAL 197

Query: 172 LEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP------------ 219
            EF Y +LQA+D+ +L +  +  +Q+GGSDQ GNI  G+D  + L               
Sbjct: 198 SEFVYPLLQAWDWWQLIQQQNVLVQVGGSDQAGNIQFGMDATKPLMKASNEYWRKHAPNP 257

Query: 220 ------KLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFA 273
                 +    T+PLLTT SG K GK+   A+WL+++MTS ++ +Q++  + D +V  + 
Sbjct: 258 EDRELLEPMGFTTPLLTTPSGQKFGKSAGNAVWLDQDMTSSFDLYQFFLRVPDENVEQYL 317

Query: 274 KRLTTLPMSEIDRMAKLQ--GKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSI 331
           K  T LP++ I  + +          A+  +A+E   ++ G  EA +A       F    
Sbjct: 318 KYFTFLPITAIKELMERHVQDPSKRVAQHKLASEFVELIRGPVEAAQAEKDHRSIFGGQT 377

Query: 332 HSQHM--------------------PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRH 371
            +  M                    P I++ +  +  G     ++  AG A S  EA R 
Sbjct: 378 PTIEMEARTKRDFTLPETHPFNAPSPHITLPRS-LVVGQFFHKVLWSAGMAPSKAEAFRL 436

Query: 372 LKSNAIKI----NNSIISNEKL 389
           + +N   +    +++ + ++K+
Sbjct: 437 IVNNGASVASRSDSTAVMDDKM 458


>gi|167515470|ref|XP_001742076.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163778700|gb|EDQ92314.1| predicted protein [Monosiga brevicollis MX1]
          Length = 370

 Score =  328 bits (841), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 114/328 (34%), Positives = 178/328 (54%), Gaps = 14/328 (4%)

Query: 21  ISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSI 80
            +   EL    S G    Y G+D TA SLH G+L  +M L      GH  ++L+GG T  
Sbjct: 30  STEREELVRHLSSGERVFYCGFDPTARSLHLGNLLSIMGLLHAALDGHYAVALIGGATGH 89

Query: 81  IGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT---GKTDA---------LMLNN 128
           +GDPS R+  R  + S  + EN   I     +  +  +    +TDA          ++NN
Sbjct: 90  VGDPSGRNSERDPLSSDALFENAISIDLSLQTIFQNASDMAKETDAERPELCDHLKLVNN 149

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             W   +  +D + ++G    ++ ML  +SV+SRL + + +S+ EF+Y + Q +DFVEL 
Sbjct: 150 VAWYERMSVLDFMVKVGKHARMHTMLGKDSVKSRLAQPEGMSYAEFSYQLFQGWDFVELN 209

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
           + Y C +Q+GGSDQWGN++ GI+L  + +  +  A+T PL+TTA+G K GK++  AIWLN
Sbjct: 210 QRYLCTIQLGGSDQWGNMLAGIELLRKCQDVQGHAITLPLMTTAAGVKFGKSMGNAIWLN 269

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKKIIATEI 306
           ++MTSPY  +Q+  N DDAD     + LT LP+  I+ +        E  EA++++A ++
Sbjct: 270 EDMTSPYQLYQFLFNTDDADCAKLLRALTFLPLDHINNIVADHTAAPEKREAQRVLAEQV 329

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQ 334
             +VHG E  E+A             +Q
Sbjct: 330 LRLVHGNEGLERAQNVTKVLHSGGSLAQ 357


>gi|300776335|ref|ZP_07086193.1| tyrosine--tRNA ligase [Chryseobacterium gleum ATCC 35910]
 gi|300501845|gb|EFK32985.1| tyrosine--tRNA ligase [Chryseobacterium gleum ATCC 35910]
          Length = 398

 Score =  327 bits (840), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 104/415 (25%), Positives = 182/415 (43%), Gaps = 28/415 (6%)

Query: 3   AFKSDFLSILSERGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLF 61
           + + +   IL E G         +L+    +   ++  +G+D TA  LH GH   L  L 
Sbjct: 4   SLQENAAIILPENGL------EEKLNQAKKENRKLSVKLGFDPTAPDLHLGHAVVLKKLK 57

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKT 121
             Q  GH+ I ++G  T+ IGDPS ++++R+ + ++E+Q N +      S  I     K 
Sbjct: 58  QFQDLGHQIIIVVGSFTARIGDPSGKNKARKPLSAEEVQHNAQTYINQLSKIIDVRKTK- 116

Query: 122 DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA 181
              ++ N  WL ++ + D+++ + S  +V +++       R      ++  E  Y ILQ 
Sbjct: 117 ---IVFNSDWLDTLNFSDVIQLL-SKVTVAQLMHRNDFNKRFTENTPIAMHELVYPILQG 172

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKT 240
           YD V++    +C ++MGG+DQ  N   G  L E  + P    +  PLL    G  KM K+
Sbjct: 173 YDSVKI----ECDIEMGGTDQLFNCTMGRQLQEVHQMPAQIVMCMPLLRGLDGKEKMSKS 228

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEA 298
           L+  I L  E   P   +    +I DA +  F    T     E         +G+     
Sbjct: 229 LNNIIGLTDE---PNEMFGKTMSIPDALIEEFINLTTDFSPQEKAELLFRMAEGENPMNI 285

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFD-MSIHSQHMPTISISKDEVSRGMGLLTLIV 357
           KKIIA  I T  H    A +A    +  F   +   +   +I I+   +   + L+ L  
Sbjct: 286 KKIIAKNIITQYHNSTAANQAEQFFITQFQNKNFEEKEYQSIPINSLSIDNKISLVKLCH 345

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           +     S +  RR +++  ++INNS I++       ++ +     K+  GK++  
Sbjct: 346 QLKNDLSKSAIRRLIENGGVQINNSKITD-----SSEELELIPGTKIKIGKRSFF 395


>gi|320102336|ref|YP_004177927.1| tyrosyl-tRNA synthetase [Isosphaera pallida ATCC 43644]
 gi|319749618|gb|ADV61378.1| tyrosyl-tRNA synthetase [Isosphaera pallida ATCC 43644]
          Length = 424

 Score =  327 bits (838), Expect = 3e-87,   Method: Composition-based stats.
 Identities = 100/412 (24%), Positives = 188/412 (45%), Gaps = 30/412 (7%)

Query: 15  RGFIHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
           RG +  +    EL     +       +    G D T  ++H GH   L  L   Q  GH 
Sbjct: 32  RG-VEAVVPEEELRRKLERSVAERRPLRVKYGIDPTGINVHLGHTVPLRKLRQFQDLGHT 90

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
            + ++G  T+++GDPS RDE+R  +   +++ N           I      + A + +N 
Sbjct: 91  AVIIIGNSTALVGDPSGRDETRARLTRDQVEANARDYLAQVGRIIDL----SRAEVHHNG 146

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
            W  +  ++D+L ++    +V++++  +    RLK  +++   E  Y ++Q +D VE+  
Sbjct: 147 DWFNTWTFLDVL-DLARRVTVSQLIERDDFAKRLKAGKAVFLHECLYPLMQGWDSVEVKA 205

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLN 248
           +    +++GGS+Q  +++   DL +        ALT P+L    GT +MGK+L   I ++
Sbjct: 206 D----VELGGSEQLFSLMLARDLQKEQGLEPQVALTMPILVGTDGTRRMGKSLGNDIGVS 261

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITT 308
           +   SP N +    +I D  +  +   LT LP  E+DR+         +AK+++A  I T
Sbjct: 262 E---SPENQFGKLMSIPDEPMRQYFTLLTDLPADEVDRLLGPD-VNPRDAKEVLARAIVT 317

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG--MGLLTLIVKAGFATSTN 366
             HG E AE+AAT   +  +  I    +P +++ +  +     M    L+V     +S +
Sbjct: 318 QYHGAEAAERAATEFRKRAER-IDPDEIPQVNLERAALDAEGRMMAAKLVVALKLESSNS 376

Query: 367 EARRHLKSNAIKIN--NSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            ARR ++   + I     +++     I++     T  + +  GK+     +L
Sbjct: 377 AARRLIEQGGVTIGPHRQVLTEPTGLIQV-----TPGLIVRVGKRKIAQVNL 423


>gi|145611092|ref|XP_368579.2| hypothetical protein MGG_00665 [Magnaporthe oryzae 70-15]
 gi|145018420|gb|EDK02699.1| hypothetical protein MGG_00665 [Magnaporthe oryzae 70-15]
          Length = 653

 Score =  326 bits (837), Expect = 3e-87,   Method: Composition-based stats.
 Identities = 116/457 (25%), Positives = 192/457 (42%), Gaps = 57/457 (12%)

Query: 8   FLSILSERGFIHQIS-NPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
              +  ERG +  ++ +   +  L     + AY+G D TA+SLH GHL  LM LFW+   
Sbjct: 90  LWDVFEERGLVKDVAGSREAIRELMRLKRIGAYVGIDPTAASLHLGHLVPLMPLFWMYMN 149

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFI--------KYGT 118
           G+  I+L+G  T+ +GDPS R   R     +   +N+  +                +YG 
Sbjct: 150 GYTSITLLGSATAKVGDPSGRLTDREKQHREVFNKNMVSMHYQLKKIWTNVDAMARRYGY 209

Query: 119 GKTDAL---MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFN 175
            +  A      NN  W      ++ L+ +GS   V  MLS ++V+ +L     LSF E  
Sbjct: 210 QEEWAWSRGQRNNNEWWNKQPLLEFLQLLGSNVRVGPMLSRDTVKRKLTEGDGLSFAELT 269

Query: 176 YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-------------TPKLF 222
           Y ++Q +D+  L K    ++Q+GGSDQ+GNI+ GI++ + ++               ++ 
Sbjct: 270 YTLMQGWDWWTLYKQLGVQMQIGGSDQFGNIVQGIEVVKTVRPQQPIPGVNPESPLEEII 329

Query: 223 ALTSPLLTTASGTKMGK-TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPM 281
             T+PLLT +SG K+GK +  G +WL+   TSPY+ + Y+    D D+    K  T +P 
Sbjct: 330 GFTTPLLTNSSGEKIGKSSGGGNLWLSNIKTSPYDLYGYFVRQPDEDMERLLKLFTFIPT 389

Query: 282 SEIDRMAKLQ--GKEINEAKKIIATEITTMVHGREEAEKAATAAME---------CFDMS 330
            +I  +       K    A+  +A E+  +VHG + AE                  F   
Sbjct: 390 KKISEIIAEHETDKPKRVAQHRLAFEVIALVHGMDVAESTQIEHKAMHGKGSVKTLFTHD 449

Query: 331 IHSQHM----PTI--SISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINN--- 381
              Q +    P     +    + +G  +  ++  AG A S ++  R     A+ I     
Sbjct: 450 TAEQVLLNSAPEAHKKLPMKLMEKG-NVARILYAAGLAKSVSDGHRLATQQAVYIGGREG 508

Query: 382 ----------SIISNEKLQIKLQDFDSTGNIKLSFGK 408
                       I     +       +   + L  GK
Sbjct: 509 NKEMGANLCFVPIKTWFPEDTKNFLINGKFLILRKGK 545


>gi|254237140|ref|ZP_04930463.1| tyrosyl-tRNA synthetase 2 [Pseudomonas aeruginosa C3719]
 gi|126169071|gb|EAZ54582.1| tyrosyl-tRNA synthetase 2 [Pseudomonas aeruginosa C3719]
          Length = 332

 Score =  326 bits (836), Expect = 4e-87,   Method: Composition-based stats.
 Identities = 88/349 (25%), Positives = 149/349 (42%), Gaps = 24/349 (6%)

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           I L+G  T +IGDPS +  +R  +  +++ EN E  K      +     +    +  N T
Sbjct: 2   IFLIGDFTGMIGDPSGKSVTRPPLTREQVLENAETYKSQVFKILDPAKTE----VAFNST 57

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           W+  +   D +R + S ++V RML  +    R    Q ++  EF Y ++Q YD V L  +
Sbjct: 58  WMDQLTPADFIR-LASQYTVARMLERDDFSKRYASNQPIAIHEFLYPLVQGYDSVALKAD 116

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNK 249
               +++GG+DQ  N++ G +L           LT PLL    G  KM K+L   I + +
Sbjct: 117 ----VELGGTDQKFNLLMGRELQRAYGQEAQVILTMPLLEGLDGVKKMSKSLGNYIGIQE 172

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEIT 307
              +P   +    +I D  +  + + L+   + EID  R     G    + K  +A EI 
Sbjct: 173 ---APGVMYSKLVSIPDTLMWRYFELLSFRSLDEIDSFRKDVEAGANPRDIKIKLAEEIV 229

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
              HG E A  A  +A          + +P I +S  E    M + +++ KAG   +   
Sbjct: 230 ARFHGEEAAASAHKSAGNRLKDGELPEDLPEIELSSPE---DMPVASVLNKAGLVKNAAA 286

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           AR  L + ++K++  ++ +    + L             GKK      L
Sbjct: 287 ARDLLGAGSVKVDGQVV-DRTFMLAL-----GETRVFQAGKKAFARITL 329


>gi|299537706|ref|ZP_07050995.1| tyrosyl-tRNA synthetase 2 [Lysinibacillus fusiformis ZC1]
 gi|298726685|gb|EFI67271.1| tyrosyl-tRNA synthetase 2 [Lysinibacillus fusiformis ZC1]
          Length = 404

 Score =  326 bits (835), Expect = 5e-87,   Method: Composition-based stats.
 Identities = 98/416 (23%), Positives = 183/416 (43%), Gaps = 28/416 (6%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M   K     I+ E+  + ++           Q  +T  +G D +A  +H GH   L  +
Sbjct: 9   MTIIKKGANKIVDEQDLLEKL-----ERSYKEQRPLTIKLGLDPSAPDIHLGHAVVLRKI 63

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             +Q  GH  + ++G  T  IGDP+ + + R  +    +++N +         +      
Sbjct: 64  KQMQDLGHHAVIVIGDFTGRIGDPTGKAKGRTALNDDTVKKNGQTYCEQIFKVLD----P 119

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N  WL  + + ++++ + +  SV R+L  E  + R ++   +   EF Y ++Q
Sbjct: 120 NKTTVRFNSEWLAKLSFEEVIK-LAATTSVARLLEREDFQKRYQQHIPIGIHEFFYPLMQ 178

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGK 239
           AYD VEL  +    +++GG+DQ  NI+ G  L +     K  A+  PLL    G  KM K
Sbjct: 179 AYDSVELVAD----IELGGTDQTFNILMGRSLQKHRGLEKQIAIFMPLLEGLDGIEKMSK 234

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT---LPMSEIDRMAKLQGKEIN 296
           +L   I +N+   +P   ++    + D  ++ + +  T    L +  I    + +G+   
Sbjct: 235 SLGNYIGINE---APEIMFKKVMEVPDTLIIKYFELATDEHPLHVQAIQDRLQ-KGENPR 290

Query: 297 EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLI 356
           + K ++A  ITT+ HG    E+A       F      +++P + +  D+  R M ++  +
Sbjct: 291 DLKFLLAEIITTLYHGSTAMEEARAYFEAAFQKKEIPKNIPILLLEIDK-ERIMDIIPQL 349

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           V  GF  S +E  R +K   + +N   ++ + L   L + D      L  GKK  +
Sbjct: 350 VVMGFIQSKSEFLRLIKQKGVSLNGEKMAMDDLSQVLMNND-----ILQIGKKRFL 400


>gi|313678879|ref|YP_004056619.1| tyrosine--tRNA ligase [Mycoplasma bovis PG45]
 gi|312950125|gb|ADR24720.1| tyrosine--tRNA ligase [Mycoplasma bovis PG45]
          Length = 411

 Score =  326 bits (835), Expect = 6e-87,   Method: Composition-based stats.
 Identities = 113/421 (26%), Positives = 213/421 (50%), Gaps = 25/421 (5%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + L+ + ER  +  ISN  +  I  +      Y+G+D TA SLH G+   + +L   +K 
Sbjct: 2   NILNDIEERLILKDISNKDKF-IGLNPATTGVYVGFDPTAESLHLGNYILISVLLRFKKY 60

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           G +  +++GG T +IGDPSF+D  R ++ ++ +  N  +IK    SF           ++
Sbjct: 61  GFRTYAVIGGATGMIGDPSFKDSERVLLDNESVINNKLRIKAQLESF--------GLEVI 112

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           +N  +   +  +D LR +G   +V+ M++ ESV+ R+  ++ LSF EF Y +LQ  DF++
Sbjct: 113 DNYDFYKDMNVLDFLRNVGKLVNVSYMMAKESVQKRI--QKGLSFTEFTYQLLQGADFLK 170

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERL--KTPKLFALTSPLLTTASGTKMGKT-LSG 243
             +    ++Q+GGSDQWGNI+ GID+  ++     +   +T  LL+  +G K+GK+   G
Sbjct: 171 TYQESGIKIQLGGSDQWGNIVTGIDMISKVVGDKHEAVGVTVNLLSDENGKKIGKSTGGG 230

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKI 301
           A+W++K M SP+  +QY  + +D+ +       +   ++EI+ +        ++  A+K 
Sbjct: 231 ALWIDKTMCSPFKMYQYLLSQNDSRIKELLYWFSFKDINEINDVLDKHFANPSKQIAQKF 290

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDE-------VSRGMGLLT 354
           +A E+   + G +E ++A       FD    +  +    +   E       + +G  ++ 
Sbjct: 291 LANEVIENIFGFDELKQAQNITKILFDKLFDTSSLSVTDLEIIEHYLPVCPIKQGDLVIK 350

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            ++   F  S  EAR  +++ A+K++N  ++N+       +F+         GKK  I+ 
Sbjct: 351 TLIDNKFIASNREAREFIQAGALKLDNCEVNNDS-VYNPINFE-GKYAFFKKGKKQIILL 408

Query: 415 H 415
            
Sbjct: 409 K 409


>gi|171695206|ref|XP_001912527.1| hypothetical protein [Podospora anserina S mat+]
 gi|170947845|emb|CAP60009.1| unnamed protein product [Podospora anserina S mat+]
          Length = 641

 Score =  326 bits (835), Expect = 6e-87,   Method: Composition-based stats.
 Identities = 114/468 (24%), Positives = 203/468 (43%), Gaps = 68/468 (14%)

Query: 9   LSILSERGFIHQISNP-RELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
             +  ERG++   +     +  L     + AY G D TA SLH GHL  LM +FW+   G
Sbjct: 69  WDMFVERGYVKDTAGSHETIRKLMLHKRIGAYTGIDPTAPSLHIGHLLPLMPIFWMYMHG 128

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFI--------KYGTG 119
           +   +L+GG T+ IGDP+ R  SR  ++  ++  N+ KI     +          + G  
Sbjct: 129 YAGYTLIGGATAKIGDPTDRLVSRTPLKRTDLTMNLTKIHYQLKALWMNVEEQARRRGFE 188

Query: 120 KTDAL---MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNY 176
           K  A    ++NN TW  S+  I++L+ +G    +  +LS ++V++++ +   +SF EF Y
Sbjct: 189 KDWAWKRAVVNNSTWWNSLPLIEVLKRLGDSMRMGPLLSRDTVKNKMSKGDGMSFSEFTY 248

Query: 177 MILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK--------------LF 222
            ++Q +D+  + +    ++Q+GGSDQ+GNI+ G++  + ++  +                
Sbjct: 249 PLMQGWDWWHMYQANGIQMQIGGSDQYGNIVTGVETVKVVRDNEPDPAKKIEGGPFNDPV 308

Query: 223 ALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMS 282
             T PLLT ++G K GK+   A+WL+K  TS ++ + Y+    D +V    K  T LPM 
Sbjct: 309 GFTVPLLTDSAGVKFGKSAGNAVWLDKFQTSEFDLYGYFVRRSDQEVEKLLKLFTFLPME 368

Query: 283 EIDRMAKLQGKEI--NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIH-------- 332
            I+   K+  +      A+ ++A E+  +VHG   A + A      +   I         
Sbjct: 369 NINEAMKIHSENPARRVAQHLLAFEVVGLVHGMNAAHRTALNHQARYGKQIDIPGVTLRM 428

Query: 333 ----SQHMPTISISK--------DEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKIN 380
               ++  P   +          + +  G  +  ++  AG A S +E  R        I 
Sbjct: 429 PKAATEDTPPSILDAPKMDMQLPESLIMGKSIGRILYAAGLAKSASEGHRLATQQGAYIG 488

Query: 381 ---------NSIISN--------EKLQIKLQD---FDSTGNIKLSFGK 408
                    ++ + +         KL    +          + L  GK
Sbjct: 489 AMPGHKRTEDNKVMDYSQLSFTPIKLWFPQETRNYLIDGKLLILRKGK 536


>gi|187251251|ref|YP_001875733.1| tyrosyl-tRNA synthetase [Elusimicrobium minutum Pei191]
 gi|186971411|gb|ACC98396.1| Tyrosyl-tRNA synthetase [Elusimicrobium minutum Pei191]
          Length = 387

 Score =  325 bits (833), Expect = 9e-87,   Method: Composition-based stats.
 Identities = 109/402 (27%), Positives = 174/402 (43%), Gaps = 29/402 (7%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  RG +  +S     + L S   +   +G D T+S LH GH   L  L   Q  GH  +
Sbjct: 10  LLTRGCVDVVSKEELENKLKSGRTLKVKLGCDPTSSDLHLGHSVVLSKLRQFQDLGHTAV 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            ++G  T+ IGDPS R+ +R  +  ++I +N +         +     K    ++ N TW
Sbjct: 70  LVIGDFTAGIGDPSGRNSTRPQLDREQILQNAKTYTEQVFKVLD----KEKTEVVFNSTW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L        L    S  +V + L  E  + R+     +S LE  Y + Q  D V L  + 
Sbjct: 126 LDPFVKTKELLLTLSKITVRQGLEREDFKKRMAAGDPVSILEILYSVFQGQDSVALKAD- 184

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G  L +         LT+PLL    G  KM K+ +  I LN  
Sbjct: 185 ---VELGGTDQIFNLLVGRQLQKNAGQEAQVVLTTPLLVGTDGVKKMSKSYNNYIGLNDP 241

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMV 310
                  +    +I D  +  + + LT+  M ++  M         EAKK +A  + T  
Sbjct: 242 A---EEMFGKAMSISDEMMYMYYELLTSEDMDKVKAM------HPMEAKKSLAKILVTRF 292

Query: 311 HGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARR 370
           H  E AE A     + F        M     SK  V+ G  + ++I+KAG A S NEARR
Sbjct: 293 HNAEAAEAALNNFEKVFSKKEKPADM-----SKITVAEGESVSSVIIKAGAAKSKNEARR 347

Query: 371 HLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
            +   A+KIN+  + ++ +      F++     L  G+++  
Sbjct: 348 LIDGGAVKINDVKVESDGVC----QFETGN--ILQVGRRHFF 383


>gi|126653939|ref|ZP_01725778.1| tyrosyl-tRNA synthetase [Bacillus sp. B14905]
 gi|126589542|gb|EAZ83683.1| tyrosyl-tRNA synthetase [Bacillus sp. B14905]
          Length = 393

 Score =  325 bits (833), Expect = 9e-87,   Method: Composition-based stats.
 Identities = 91/403 (22%), Positives = 174/403 (43%), Gaps = 30/403 (7%)

Query: 20  QISNPRELDILCS-----QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLM 74
           +I +  EL          Q  +T  +G D +A  +H GH   L  +  LQ  GH  + ++
Sbjct: 7   KIVDEPELLKKLEHSFQEQKPLTIKLGLDPSAPDIHLGHAVVLRKIKQLQDLGHHAVIVI 66

Query: 75  GGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCS 134
           G  T  IGDP+ + + R  +  + ++EN +         +     +    +  N  WL  
Sbjct: 67  GDFTGRIGDPTGKSKGRVALSDELVKENAKTYCEQIFKVLD----EEKMTVRFNSEWLAK 122

Query: 135 IKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCR 194
           + + +++ ++ +  SV R+L  E  + R   +  +   EF Y ++QAYD VEL  +    
Sbjct: 123 LTFEEVI-QLAATTSVARILEREDFQKRYHHQIPIGLHEFFYPLMQAYDSVELKAD---- 177

Query: 195 LQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTS 253
           +++GG+DQ  NI+ G  L       K  A+  PLL    G  KM K+L   I +++   +
Sbjct: 178 IELGGTDQTFNILMGRTLQRHRGLEKQIAIFMPLLEGLDGIEKMSKSLGNYIGVHE---A 234

Query: 254 PYNFWQYWRNIDDADVVSFAKRLTTL-PMSEIDRMAKLQ-GKEINEAKKIIATEITTMVH 311
           P   ++    + D+ ++ + +  T   P+       +LQ G+   + K  +A  +T + H
Sbjct: 235 PEVMFKKIMELPDSLIIKYFELATDEHPLQVQAVQERLQNGENPRDIKLQLAEIVTALYH 294

Query: 312 GREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRH 371
           G      A +     F   +   ++P + +  D+  R   ++  ++   F  S ++  R 
Sbjct: 295 GHAATMDAKSYFEAAFQKKMIPANIPVLLLEIDK-ERIEDIIPQLISIQFIQSKSDFIRL 353

Query: 372 LKSNAIKINNSI--ISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           +K N + +N     + +    +  +D        L  GKK  +
Sbjct: 354 IKQNGVSLNGEKIAVDDLSQVLMNED-------VLQIGKKRFL 389


>gi|194477160|ref|YP_002049339.1| tyrosyl-tRNA synthetase [Paulinella chromatophora]
 gi|171192167|gb|ACB43129.1| tyrosyl-tRNA synthetase [Paulinella chromatophora]
          Length = 420

 Score =  324 bits (832), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 88/387 (22%), Positives = 163/387 (42%), Gaps = 31/387 (8%)

Query: 34  GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRM 93
             +   +G D T + +H GH      L   Q  GH  + ++G  T+ IGDP+ ++ +R  
Sbjct: 46  RPLRVKLGIDPTGTDIHLGHSILFRKLRAFQDAGHIAVLIIGDFTARIGDPTGKNTTRVQ 105

Query: 94  MRSQEIQENIEKIKGIF-------SSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGS 146
           +  +E++ N +              + + + T      +  N TWL  +  +++++ +G 
Sbjct: 106 LSIEEVEANAQTYLQQLGKDQPKEKALLDFETP-GRLEVYQNSTWLGEMDLLEIIKLLG- 163

Query: 147 FFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNI 206
             +V +ML+ E   +R K    ++  EF Y +LQ YD V +  +    +++GG+DQ  N+
Sbjct: 164 TATVGQMLAKEDFANRYKLGTPIALHEFLYPLLQGYDSVAIRAD----VELGGTDQRFNV 219

Query: 207 ICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYWRNID 265
             G DL         F L  P+L    G  KM K+L   + L ++     + +     + 
Sbjct: 220 AIGRDLQRYYGQRPQFCLLLPILPGLDGVQKMSKSLHNTVNLTEDAL---SMYSKLEKLP 276

Query: 266 DADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAME 325
           D  V  +   LT + ++ +            E +K +A +IT   HG   A  A   A +
Sbjct: 277 DNVVNQYLTLLTDIDLANLV-------GTPRERQKRMAFQITANWHGDAAASAAQLDAAK 329

Query: 326 CF---DMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNS 382
                      Q++  +S++  EV        L+   G   S++EARR ++   ++++  
Sbjct: 330 LVVGIAGIELKQNLKEVSLN--EVKFPAKAFYLLSAVGICASSSEARRKIQGGGVRLDGE 387

Query: 383 IISNEKLQIKLQDFDSTGNIKLSFGKK 409
            I +   +       S     L  GKK
Sbjct: 388 KIIDPNQEFAKASDLSGK--VLQLGKK 412


>gi|71022055|ref|XP_761258.1| hypothetical protein UM05111.1 [Ustilago maydis 521]
 gi|46097752|gb|EAK82985.1| hypothetical protein UM05111.1 [Ustilago maydis 521]
          Length = 543

 Score =  324 bits (832), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 125/473 (26%), Positives = 195/473 (41%), Gaps = 72/473 (15%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           D +S L  R  I  +++      L S   +  Y G D +A SLH G+L  L+ L    + 
Sbjct: 61  DLISELESRNLIAHVTSRSLRSHLSSAPRI-VYSGVDPSADSLHVGNLLPLLTLAHFARH 119

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY---------- 116
            H PI L+GG T  IGDPS R   R  +    +  N+  I      F  +          
Sbjct: 120 RHHPIVLVGGATGSIGDPSGRSTERNALSKDVLHRNVAAITQQVGKFFNHVQEYYAESTG 179

Query: 117 ---------GTGKTDA-------LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
                       + +A        M+NN  W+  +  +D L  +G    + +ML+ +SV 
Sbjct: 180 ERFAVDNHTEDKEREASRLGMGIRMMNNYEWMKDVSLLDFLGGVGRHARLTQMLARDSVA 239

Query: 161 SRL------------KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIIC 208
           SRL                 +S+ EF+Y +LQAYDF  L  ++ C +Q+GGSDQ GNI  
Sbjct: 240 SRLAPATSTGSSSAANGGGGMSYTEFSYQLLQAYDFSFLHTHHACTIQIGGSDQLGNITA 299

Query: 209 GIDLGER-----LKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
           GIDL  R     L T   + LT PLLTT +G K GK+   A+WL++  TS +  +Q++  
Sbjct: 300 GIDLIRRTSSTSLLTDPAYGLTLPLLTTCTGEKFGKSAGNAVWLSRSKTSDWALYQFFVR 359

Query: 264 IDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKKIIATEITTMVHGREEAEKAAT 321
             DADV  +   LT L    +  + +     K++ +A+ ++A  +T ++ G    ++   
Sbjct: 360 SSDADVERYLLSLTLLEPQFVKSIMQEHQENKKLRKAQTVLADHMTRLIRGTHAMQRCKL 419

Query: 322 AAMECFDMSIHSQHMPTIS------ISKDEVSRGMGLLTLIVK--------------AGF 361
                F  +         +      +    +    G++  +                AG 
Sbjct: 420 LTELLFSHTRTLGDPLESTRKMLSQLDTSSIGDQDGIVAKLHDEQVVGVDVTKVVTTAGL 479

Query: 362 ATSTNEARRHLKSNAIKINNSII-SNEKLQIKLQDFD-----STGNIKLSFGK 408
             S  EA+R L S  + INN  +  +    +  QD             L  GK
Sbjct: 480 VKSRAEAKRLLISGGLYINNRQVQQDANTVVSEQDLVRAKSAGGRICLLRAGK 532


>gi|159795079|pdb|2PID|A Chain A, Crystal Structure Of Human Mitochondrial Tyrosyl-Trna
           Synthetase In Complex With An Adenylate Analog
 gi|159795080|pdb|2PID|B Chain B, Crystal Structure Of Human Mitochondrial Tyrosyl-Trna
           Synthetase In Complex With An Adenylate Analog
          Length = 356

 Score =  324 bits (830), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 118/335 (35%), Positives = 174/335 (51%), Gaps = 17/335 (5%)

Query: 13  SERGFIHQISNPR----ELDILCSQG----VVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
             RG             EL  L  +G      T Y G+D TA SLH GHL  L+ LF LQ
Sbjct: 16  KARGLFKDFFPETGTKIELPELFDRGTASFPQTIYCGFDPTADSLHVGHLLALLGLFHLQ 75

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI-------EKIKGIFSSFIKYG 117
           + GH  I+L+GG T+ +GDPS R + R  + ++ ++ N        E +          G
Sbjct: 76  RAGHNVIALVGGATARLGDPSGRTKEREALETERVRANARALRLGLEALAANHQQLFTDG 135

Query: 118 TGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYM 177
                  +L+N  W      +D L  +G  F +  +LS +SV+ RLK  + +S  EF Y 
Sbjct: 136 RSWGSFTVLDNSAWYQKQHLVDFLAAVGGHFRMGTLLSRQSVQLRLKSPEGMSLAEFFYQ 195

Query: 178 ILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
           +LQAYDF  L + Y CR+Q+GGSDQ GNI+ G +   +L    +F +T PL+T+ +G K+
Sbjct: 196 VLQAYDFYYLFQRYGCRVQLGGSDQLGNIMSGYEFINKLTGEDVFGITVPLITSTTGAKL 255

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI-- 295
           GK+   A+WLN++ TSP+  +Q++    D  V  + K  T LP+ EID + +L  KE   
Sbjct: 256 GKSAGNAVWLNRDKTSPFELYQFFVRQPDDSVERYLKLFTFLPLPEIDHIMQLHVKEPER 315

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMS 330
              +K +A E+T +VHGRE  + A       +  S
Sbjct: 316 RGPQKRLAAEVTKLVHGREGLDSAKRCTQALYHRS 350


>gi|33865104|ref|NP_896663.1| tyrosyl-tRNA synthetase [Synechococcus sp. WH 8102]
 gi|81572943|sp|Q7TTW9|SYY_SYNPX RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|33638788|emb|CAE07083.1| t-RNA synthetase, class Ib:Tyrosyl-tRNA synthetase [Synechococcus
           sp. WH 8102]
          Length = 415

 Score =  324 bits (830), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 86/389 (22%), Positives = 151/389 (38%), Gaps = 29/389 (7%)

Query: 32  SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESR 91
               +   +G D T S++H GH      L   Q  GH  + ++G  T+ IGDP+ +  +R
Sbjct: 42  EGRPLRVKLGIDPTGSNIHLGHSILFRKLRAFQDAGHTAVLIIGDFTARIGDPTGKCATR 101

Query: 92  RMMRSQEIQENIEKIKGIFSS-------FIKYGTGKTDALMLNNETWLCSIKYIDLLREI 144
             +  +++  N                  + + T      +  N  WL  +    ++  +
Sbjct: 102 VQLSKEDVAANASTYLRQLGQDQPKETALLDFETP-GRLEVRYNSEWLEGMDLPAVIGLL 160

Query: 145 GSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWG 204
           G   +V +ML+ +    R      ++  EF Y +LQ YD V +  +    +++GG+DQ  
Sbjct: 161 G-TGTVGQMLAKDDFSKRYGSGTPIALHEFLYPLLQGYDSVAVNAD----VELGGTDQKF 215

Query: 205 NIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
           N+  G DL         F L  P+L    G  KM K+L   + L ++   P + +     
Sbjct: 216 NVAMGRDLQRHFNKGTQFGLLLPILVGLDGVQKMSKSLGNVVGLEED---PLSMYSKLEK 272

Query: 264 IDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAA 323
           + D  +  +            D       +   E +K +A  +T   HG E A+KA   A
Sbjct: 273 VGDGAINDYV-------TLLTDLDLATLPENPREKQKAMALAVTASRHGMEAAQKAQLDA 325

Query: 324 MECFDM-SIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNS 382
                     +  +P  S++  EV+       L+   G   S++EARR +K  A+++   
Sbjct: 326 ASLVGGAGDAATEVPGASLA--EVNFPAKAFYLLSAVGICASSSEARRQIKGGAVRLEGE 383

Query: 383 IISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
            I +   +             L  GKK  
Sbjct: 384 KIGDPNQEFASAAELEGK--VLQLGKKTF 410


>gi|169829079|ref|YP_001699237.1| tyrosyl-tRNA synthetase 2 [Lysinibacillus sphaericus C3-41]
 gi|168993567|gb|ACA41107.1| Tyrosyl-tRNA synthetase 2 [Lysinibacillus sphaericus C3-41]
          Length = 404

 Score =  323 bits (828), Expect = 3e-86,   Method: Composition-based stats.
 Identities = 93/403 (23%), Positives = 178/403 (44%), Gaps = 28/403 (6%)

Query: 19  HQISNPRELDILCS-----QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           ++I +  EL          +  +T  +G D +A  +H GH   L  +  LQ  GH  + +
Sbjct: 17  NKIVDELELLQKLERSFQEKKPLTIKLGLDPSAPDIHLGHAVVLRKIKQLQDLGHHAVIV 76

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
           +G  T  IGDP+ + + R  +  + + EN +         +     +    +  N  WL 
Sbjct: 77  IGDFTGRIGDPTGKSKGRVALSDELVGENAKTYCEQIFKVLD----EEKTTIRFNSEWLA 132

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDC 193
            + + +++ ++ +  SV R+L  E  + R  ++  +   EF Y ++QAYD VEL  +   
Sbjct: 133 KLNFEEVI-QLAATTSVARILEREDFQKRYHQQIPIGMHEFFYPLMQAYDSVELKAD--- 188

Query: 194 RLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMT 252
            +++GG+DQ  NI+ G  L       K  A+  PLL    G  KM K+L   I +++   
Sbjct: 189 -IELGGTDQTFNILMGRTLQRHRGLEKQIAIFMPLLEGLDGVEKMSKSLGNYIGIHE--- 244

Query: 253 SPYNFWQYWRNIDDADVVSFAKRLTT---LPMSEIDRMAKLQGKEINEAKKIIATEITTM 309
           +P   ++    I D+ ++ + +  T    L +  I    ++ G+   + K  +A  +T +
Sbjct: 245 APEVMFKKIMEIPDSLIIKYFELATDEHPLQVQAIQERLRM-GENPRDLKLHLAEIVTAL 303

Query: 310 VHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEAR 369
            HG      A +     F   +   ++PT+ +  D+  R   ++  ++   F  S ++  
Sbjct: 304 YHGHAATMDAKSYFEAAFQKKVIPTNIPTLLLEIDK-ERIEDIIPQLISIHFIQSKSDFL 362

Query: 370 RHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           R +K N + +N   ++ + L   L + D      L  GKK  +
Sbjct: 363 RLIKQNGVSLNGEKMAADDLSRVLMNED-----VLQIGKKRFL 400


>gi|300122241|emb|CBK22814.2| Tyrosyl-tRNA synthetase [Blastocystis hominis]
          Length = 339

 Score =  323 bits (828), Expect = 3e-86,   Method: Composition-based stats.
 Identities = 118/335 (35%), Positives = 176/335 (52%), Gaps = 12/335 (3%)

Query: 9   LSILSERGFIHQISN--PRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
              L  RG I+Q S      L  +      + Y+G D TA  LH GHL    +L      
Sbjct: 4   FQYLKNRGLIYQTSQLAEEALKSILPNQ--SIYLGVDPTAKGLHIGHLMACRILKRFHDA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           G K I+L+GG T++IGDPSF+ + R ++ + ++QEN+++I+      +    G  + L +
Sbjct: 62  GTKCIALVGGATALIGDPSFKVKERDILSADDVQENVKEIQNDLKRVLN-SNGDDNLLFV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W  ++  ID LR++G    V  ML+ +SV  R+    SLSF EF Y  LQA DF+ 
Sbjct: 121 NNYDWYKNMGVIDFLRDVGKNMRVQSMLAKDSVSKRINSPNSLSFAEFAYQCLQANDFLH 180

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L   Y C  Q+GGSDQWGNI  GID  +R     +  +T PLLT + G K GK+   AIW
Sbjct: 181 LHTQYGCVCQIGGSDQWGNITSGIDFVKRKTGDVVHGITVPLLTNSKGQKFGKSEGNAIW 240

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINEAKKIIA- 303
           +NK  TS ++F+Q++   +DAD+    + LT LP+ +ID +     K  E  EA+ ++A 
Sbjct: 241 INKSRTSNHDFYQFFLRTEDADLPILFRLLTDLPLDQIDALLAEHQKCPEKREAQGVLAG 300

Query: 304 -TEITTMVHGREEAEKAATAAMECFDMSIHSQHMP 337
            T+   ++  R +   A  +    F      +  P
Sbjct: 301 TTKSKGIISRRND---AFGSFRAGFAKGEKVRRAP 332


>gi|159900216|ref|YP_001546463.1| tyrosyl-tRNA synthetase [Herpetosiphon aurantiacus ATCC 23779]
 gi|159893255|gb|ABX06335.1| tyrosyl-tRNA synthetase [Herpetosiphon aurantiacus ATCC 23779]
          Length = 393

 Score =  323 bits (828), Expect = 4e-86,   Method: Composition-based stats.
 Identities = 96/413 (23%), Positives = 173/413 (41%), Gaps = 27/413 (6%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           +  +  RG    I        L +   +   +G D T S +H GH   L  +   Q+ GH
Sbjct: 4   IDEILSRGVSEVIVEANVRRKLNAGKPLRLKLGIDPTRSDIHIGHAVALRKMRQFQELGH 63

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
             + ++G  T+ IGDP+ RDESR  +  +E + N +         I     +        
Sbjct: 64  TVVLIVGDWTAQIGDPTGRDESRPRLTVEETKSNAKYYMDQVFKVIDPAKTEVRWQ---- 119

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             W            IG  F+VN+ML+ E+ R R +  Q L+ LE  Y +LQAYD + + 
Sbjct: 120 SEWFGQFDLEKAFGLIGR-FTVNQMLAHETFRKRYEAGQQLTVLELMYPMLQAYDSIAIK 178

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
            +    ++ GG+DQ  NI+ G  L E++       +  PL+    G KM K+ + ++ + 
Sbjct: 179 PD----IEFGGTDQKFNILAGRQLMEQMGMESQDVILVPLIIGTDGRKMSKSFNNSVDI- 233

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAKKIIATE 305
             + SP + +    ++ D  +  + +  +  P++E+  M++          + K  +A +
Sbjct: 234 --LMSPNDKYGKIMSMGDDVLPVYYEVWSDAPLAEVKAMSEAIKAGSVNPRDLKMQLARD 291

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           I   + G   A +A    +  F        MP +++S+        ++ L+V    A S 
Sbjct: 292 IIRQLDGEAAAAEAEAEFIRVFQQRDLPTDMPEVALSEA-----ANIVDLLVSTKLAASK 346

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLCG 418
            EARR +    +++    IS+    ++       G   L  G++      L G
Sbjct: 347 GEARRLIDGGGVRLAGEKISSYDSLVQP-----VGEQILQVGRRKF--VKLLG 392


>gi|227327362|ref|ZP_03831386.1| tyrosyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           carotovorum WPP14]
          Length = 400

 Score =  322 bits (826), Expect = 6e-86,   Method: Composition-based stats.
 Identities = 96/408 (23%), Positives = 164/408 (40%), Gaps = 31/408 (7%)

Query: 18  IHQISNPRELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPIS 72
           I  +     L+    Q       +   +G+D TA  LH GH   L  L   Q  GH  + 
Sbjct: 14  IAIMEPSNGLEKKLEQAEKENRKLIIKLGFDPTAPDLHLGHAVVLRKLKQFQDAGHDIVI 73

Query: 73  LMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL 132
           ++G  T+ IGDP+ R++ R  +  ++I  N +         I      +   +  N  W 
Sbjct: 74  IIGDFTASIGDPTGRNKLRPPLSEKQIALNSQTYLDQLGRIID----TSRIQVRRNSDWF 129

Query: 133 CSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYD 192
             + + ++L  + S  ++ +M+  +  ++R      +   E  Y ILQ YD V +  +  
Sbjct: 130 KKMPFSEILGLV-SRVTLAQMMQRDDFKTRYAASSPIHLHELLYPILQGYDSVMINAD-- 186

Query: 193 CRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEM 251
             +++GG+DQ  N + G  L E   +     +T PLL    G  KM K+    I L    
Sbjct: 187 --IELGGTDQLFNNMVGRMLQESFGSEGQSVITMPLLEGLDGKDKMSKSKGNYIALT--- 241

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI--DRMAKLQGKEINEAKKIIATEITTM 309
            SP   +    ++ D  ++S+    T +    I   R    +GK     KK +A +I  +
Sbjct: 242 DSPEEMYGKIMSLPDHLIISYFSLATNVSAEYIIEVREQMERGKNPILIKKDLAHQIVGI 301

Query: 310 VHGREEAEKAATAAMECFDMS--IHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
            H  E A+ A       F         H+P I     +    + L+    +A    S +E
Sbjct: 302 YHDAEAADAAGKHFERVFQRHNPTEEDHLPLI----VDGQAPLALIDFCSQALADMSRSE 357

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            RR ++S A++IN    ++E   I  +       + L  GK +  I  
Sbjct: 358 LRRLIRSGAVRINTHKETDELAMINPE-----PGMLLWLGKHHRFIVR 400


>gi|87123678|ref|ZP_01079528.1| t-RNA synthetase, class Ib:Tyrosyl-tRNA synthetase [Synechococcus
           sp. RS9917]
 gi|86168247|gb|EAQ69504.1| t-RNA synthetase, class Ib:Tyrosyl-tRNA synthetase [Synechococcus
           sp. RS9917]
          Length = 415

 Score =  322 bits (826), Expect = 6e-86,   Method: Composition-based stats.
 Identities = 92/408 (22%), Positives = 158/408 (38%), Gaps = 31/408 (7%)

Query: 20  QISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTS 79
           Q    R          +   +G D T S +H GH      L   Q  GH  + ++G  T+
Sbjct: 30  QCLAARLAAATAEGRPLRIKLGIDPTGSDIHLGHSILFRKLRAFQDAGHTAVLIIGDFTA 89

Query: 80  IIGDPSFRDESRRMMRSQEIQENIEKIKGIF-------SSFIKYGTGKTDALMLNNETWL 132
            IGDP+ +  +R  +  +++Q N                + + + T      +  N  WL
Sbjct: 90  RIGDPTGKSATRVQLSKEQVQANATTYLNQLGQGQPKEQALLDFETP-GRLEVRRNSEWL 148

Query: 133 CSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYD 192
             +    ++  +G   +V +ML+ +    R      ++  EF Y +LQ YD V +  +  
Sbjct: 149 EGLDLPQVIGLLG-TATVGQMLAKDDFSKRYGSGTPIALHEFLYPLLQGYDSVAVDAD-- 205

Query: 193 CRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEM 251
             +++GG+DQ  N+  G DL         F +  P+L    G  KM K+L   + L ++ 
Sbjct: 206 --VELGGTDQKFNVAMGRDLQRHFGQRTQFGMLLPILVGLDGVQKMSKSLGNTVGLEED- 262

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVH 311
             P + +     + D  +  +            D   +   +   E +K +A  +T   H
Sbjct: 263 --PLSMYSKLEKVGDGAINDYV-------TLLTDLDLETLPENPREKQKAMALAVTASRH 313

Query: 312 GREEAEKAATAAMECFDM-SIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARR 370
           G+E A KA   A          +  +P  S++  EV+       L+   G   S++EARR
Sbjct: 314 GQEAAAKAQADAATLVGGAGDAAADVPEASLA--EVNFPAKAFYLLSAVGICASSSEARR 371

Query: 371 HLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLCG 418
            +K  A ++    IS+   +             L  GKK  I   L G
Sbjct: 372 QIKGGAARLEGEKISDPNQEFASAAELEGK--VLQLGKK--IFRRLVG 415


>gi|168701261|ref|ZP_02733538.1| tyrosyl-tRNA synthetase [Gemmata obscuriglobus UQM 2246]
          Length = 404

 Score =  322 bits (826), Expect = 7e-86,   Method: Composition-based stats.
 Identities = 98/403 (24%), Positives = 174/403 (43%), Gaps = 36/403 (8%)

Query: 25  RELDILCSQ-----GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTS 79
            EL     +       +    G D T   +H GH   L  L   Q+ GH  + ++G  T+
Sbjct: 26  EELKKKLEKSFTSGKPLRVKYGIDPTGFDVHLGHTVPLRKLRQFQEFGHTAVLIIGTATA 85

Query: 80  IIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYID 139
            +GDPS RD SR+ + +++I +N +      +  +      + A +  N  W     + D
Sbjct: 86  AVGDPSGRDASRQGLTTEQIDKNAQTYLTQIAKVVDV----SKAEVRPNGEWFSKFTFAD 141

Query: 140 LLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGG 199
           +L+ +G   ++ RM+  +    R+K   ++   E  Y ++Q +D VE+  +    +++GG
Sbjct: 142 MLKLLG-HTTMQRMIERDDFTKRIKAGAAIYLHECLYPLMQGHDSVEIRAD----VELGG 196

Query: 200 SDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFW 258
           ++Q  N++ G DL           LT P+L    G  KMGK++   I LN+      + +
Sbjct: 197 TEQLYNLMVGRDLQRAAGQEPQICLTMPILRGTDGEKKMGKSVGNYIGLNEPAK---DMF 253

Query: 259 QYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEK 318
                I D  +  +   LT     ++ R+         EAKK +A +I    HG E A  
Sbjct: 254 GKTMRIHDELLTEWYALLTDRSHEDVTRLLT----TPLEAKKTLAADIVRFYHGEEVA-S 308

Query: 319 AATAAMECFDMSIHSQHMPTISISKDEVSRGMGL-LTLIVKAGFATSTNEARRHLKSNAI 377
           A  A  +    +I   ++  ISI  D++  G  L + LI +     S +EARR ++  A 
Sbjct: 309 ATRADWDNAAKNIDPVNIDDISIPADKIKDGAMLAVDLIAETKLTASKSEARRKIEEGAF 368

Query: 378 KIN----NSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             N     +  ++ K  + + D      + +  G+K  +   L
Sbjct: 369 --NYGPGRTKPADVKATVPVTD-----GLVIRLGRK-ILRVRL 403


>gi|33861885|ref|NP_893446.1| tyrosyl-tRNA synthetase [Prochlorococcus marinus subsp. pastoris
           str. CCMP1986]
 gi|81575709|sp|Q7V0D7|SYY_PROMP RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|33640253|emb|CAE19788.1| Tyrosyl-tRNA synthetase [Prochlorococcus marinus subsp. pastoris
           str. CCMP1986]
          Length = 412

 Score =  322 bits (826), Expect = 7e-86,   Method: Composition-based stats.
 Identities = 90/387 (23%), Positives = 177/387 (45%), Gaps = 28/387 (7%)

Query: 32  SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESR 91
           S+  +   +G D T + +H GH      L   Q  GH  + ++G  T+ IGDP+ ++++R
Sbjct: 38  SKSKLRVKLGIDPTGTDIHLGHSILFKKLRAFQDNGHVAVLIIGDFTAQIGDPTGKNKTR 97

Query: 92  RMMRSQEIQENIEKIKGIF-------SSFIKYGTGKTDALMLNNETWLCSIKYIDLLREI 144
             +  +E++EN +              S + + +      +  N  WL ++    ++  +
Sbjct: 98  VQLSEEEVKENSKTYLNQLGMGKSSDKSILDFDSEDR-IEIRYNSEWLKNLNLNSIIELM 156

Query: 145 GSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWG 204
           GS  +V++ML+ E    R   +  ++  EF Y +LQ YD V +  +    +++GG+DQ  
Sbjct: 157 GS-ATVSQMLAKEEFNKRYNSQTPIALHEFLYPLLQGYDSVAVNSD----IELGGTDQKF 211

Query: 205 NIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
           NI  G DL    K    + +  P+LT   G  KM K+ S  + L+++     + +     
Sbjct: 212 NIAIGRDLQRHFKQEPQYGILLPILTGLDGIKKMSKSESNTVGLSEDSL---SMYSKLEK 268

Query: 264 IDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAA 323
           + D  + S+ +      +     +  L+     + ++ +A E+T++ HG+EEA +A +  
Sbjct: 269 VPDNIIPSYFE------LLTELDLTLLKDNNPRDLQRRMALEVTSLYHGKEEALRAQSNC 322

Query: 324 MECF-DMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNS 382
            + F  +      +P IS+   E+   +    L+       S++E++R +K   +KI++ 
Sbjct: 323 EKLFLGLKEKVGEIPIISLK--EIVFPVKFFYLLSSLNLFKSSSESKRSIKGGGVKIDSY 380

Query: 383 IISNEKLQIKLQDFDSTGNIKLSFGKK 409
            + N  L    ++  S     L  GKK
Sbjct: 381 KLVNPDLVFDSKEDLSGK--ILQIGKK 405


>gi|238063978|ref|ZP_04608687.1| tyrosyl-tRNA synthetase [Micromonospora sp. ATCC 39149]
 gi|237885789|gb|EEP74617.1| tyrosyl-tRNA synthetase [Micromonospora sp. ATCC 39149]
          Length = 450

 Score =  322 bits (825), Expect = 8e-86,   Method: Composition-based stats.
 Identities = 104/313 (33%), Positives = 158/313 (50%), Gaps = 10/313 (3%)

Query: 112 SFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSF 171
             ++ G  +   L+         +  ++ LR++G  F VN+ML+ E V++RL  E  +SF
Sbjct: 138 RLVQRGGERGGGLVQQPGPGPGRLSVVEFLRDVGKHFPVNKMLAREVVKARL--ETGISF 195

Query: 172 LEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT 231
            EF+Y +LQA DF EL + + C+LQ GGSDQWGNI  G+D   R     + A  +PL+T 
Sbjct: 196 TEFSYQLLQANDFYELHRRHGCQLQFGGSDQWGNITAGVDYVRRRGAGPVQAFVTPLVTK 255

Query: 232 ASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ 291
           A GTK GKT  GA+WL+ E+TSPY F+Q+W N DD DVV + +  +     EI+R+ K  
Sbjct: 256 ADGTKFGKTEGGAVWLDPELTSPYAFYQFWLNADDRDVVRYLRYFSFRSRDEIERLEKET 315

Query: 292 GKEI--NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPT------ISISK 343
            +      A++ +A E+TT+VHG  E  +A  A+   F         P            
Sbjct: 316 AERPAARLAQRALAEELTTLVHGEREMAQAVAASQALFGRGSLDDLTPETLRAALTEAGL 375

Query: 344 DEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
             +     +  L+ ++G   S  EARR +      +NN+ I+    +   +D      + 
Sbjct: 376 VHLDELPDVAGLLRESGLVPSAKEARRVIAEGGAYVNNNRITEVDARPTPEDLLHGRYLV 435

Query: 404 LSFGKKNHIICHL 416
           L  GKK+     L
Sbjct: 436 LRRGKKSFAGVEL 448


>gi|205374491|ref|ZP_03227287.1| tyrosyl-tRNA synthetase [Bacillus coahuilensis m4-4]
          Length = 329

 Score =  321 bits (824), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 102/293 (34%), Positives = 158/293 (53%), Gaps = 19/293 (6%)

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M+NN  WL ++  +  LR+ G +  VN ML+ +++ SRL     +SF EF Y ILQA DF
Sbjct: 1   MVNNYDWLGTMDVVTFLRDFGKYVGVNYMLAKDTIASRLDS--GISFTEFTYTILQALDF 58

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERL--KTPKLFALTSPLLTTASGTKMGKTLS 242
             L ++Y+C+LQ+GGSDQWGNI  G+++  +   +  K F LT PL+T A GTK GKT S
Sbjct: 59  NHLYEHYNCKLQIGGSDQWGNITTGLEVIRKHQEEGAKAFGLTIPLVTKADGTKFGKTES 118

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKK 300
           GAIWL+ E T+PY F+Q+W N  DADVV + K  T L   +I+    A      + +A+K
Sbjct: 119 GAIWLDPEKTTPYEFYQFWINTADADVVKYLKFFTFLTQEDIESLAAAVETEPHLRKAQK 178

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGM 350
            +A E+T ++HG     +A       F   +            + +P+I +SK E    +
Sbjct: 179 ALAEEMTRLIHGEAALAQAQKITQALFSGDVKELTASEIEQGFKDVPSIEVSKAE---DV 235

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
            L+ L+V+   + S  +AR  + + A+ +N    ++    +  +D        
Sbjct: 236 QLIELLVETKLSPSKRQAREDISNGAVYVNGERQTDLAYSLSEEDKVGGKFTI 288


>gi|54020016|ref|YP_115580.1| tyrosyl tRNA synthetase [Mycoplasma hyopneumoniae 232]
 gi|71893418|ref|YP_278864.1| tyrosyl tRNA synthetase [Mycoplasma hyopneumoniae J]
 gi|81378792|sp|Q601Y5|SYY_MYCH2 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|97201635|sp|Q4AAX3|SYY_MYCHJ RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|53987189|gb|AAV27390.1| tyrosyl tRNA synthetase [Mycoplasma hyopneumoniae 232]
 gi|71851545|gb|AAZ44153.1| tyrosyl tRNA synthetase [Mycoplasma hyopneumoniae J]
          Length = 414

 Score =  321 bits (823), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 131/428 (30%), Positives = 209/428 (48%), Gaps = 36/428 (8%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           K +FL+ L  R  +  IS+P +   L  +     YIG+D TA+SLH G+   + LL  LQ
Sbjct: 6   KQEFLTELKTRNILKDISSPEKFFNL--KPDQGIYIGFDPTATSLHLGNYISISLLKRLQ 63

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           K G K ++++GG T +IGDPSF  + R+++  + +  N EKIK    SF           
Sbjct: 64  KIGIKVLAVIGGATGMIGDPSFSSKERKLLDFKTLNANKEKIKKQLESF--------GLP 115

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           + +N     ++  +D LR++G   +++ +L+ ESV SR+  E  LSF EF+Y ++Q +DF
Sbjct: 116 VFDNFEIYKNMNILDFLRDVGKNINISYLLAKESVASRI--EVGLSFTEFSYQLIQGWDF 173

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGER---LKTPKLFALTSPLLTTASGTKMGKTL 241
             LA+NY    Q GGSDQWGN++ G+D  ++   ++  + F  T+ LLT  +G K GK+L
Sbjct: 174 KFLAENYQIIGQAGGSDQWGNMVTGLDFIKKSNLVQKDEAFVFTTNLLTDENGQKFGKSL 233

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAK 299
              IWL+ EM SP++ +Q+  N +D         L+ L +  I+         K+    +
Sbjct: 234 GKPIWLDPEMYSPFHLYQFLLNQNDEQAEKIMLWLSFLDLKVINELIFKHKNDKKQRILQ 293

Query: 300 KIIATEITTMVHGREEAEKAATAAMECF-----------DMSIHSQHMPTISISKDEVSR 348
             +A E+   +HG +  + A       F           D     + +P   +S    ++
Sbjct: 294 YNLAQEVVFNIHGDKGLKIAKKITKILFEKLDYTEITFKDKLELKKIIPYFKVSFFNANQ 353

Query: 349 GMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGK 408
              ++ L    G   S  E    +   A++IN S ISN    I  +  D +    L  GK
Sbjct: 354 ---IIDL----GIFKSKRELNEFISHKALEINGSKISNIG-DITEELKDKSNLFLLRKGK 405

Query: 409 KNHIICHL 416
           K   I  L
Sbjct: 406 KYFFIIEL 413


>gi|196230468|ref|ZP_03129330.1| tyrosyl-tRNA synthetase [Chthoniobacter flavus Ellin428]
 gi|196225398|gb|EDY19906.1| tyrosyl-tRNA synthetase [Chthoniobacter flavus Ellin428]
          Length = 390

 Score =  320 bits (821), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 92/413 (22%), Positives = 166/413 (40%), Gaps = 38/413 (9%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L IL  RG    I+    L  L     +   +G D TA  +H G    L  L   Q  GH
Sbjct: 8   LEILK-RGAAQIINEAELLAKLRLGRPLNVKLGVDPTAPDIHLGFTVALTKLRQFQDLGH 66

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           + I ++G  T++IGDPS R ++R  +   ++  N    +      +     +T    + N
Sbjct: 67  QAILIIGDFTAMIGDPSGRSKARPQLTHDQVMNNARSFQEQAYKILDPERTRT----VFN 122

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             W   + + ++++  G   ++ +ML  E  ++RL+R  ++   E  Y I+Q +D V + 
Sbjct: 123 GQWFEMMTFEEVIKLNGR-VTLQQMLQREDFKNRLERGDAVHLHEIQYPIMQGWDSVVVK 181

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWL 247
            +    +++GG+DQ  NI+ G DL      P+      PLL    G  KM K+L   + +
Sbjct: 182 AD----VEIGGTDQLFNILVGRDLQREEGQPQQIVFLMPLLEGLDGVQKMSKSLGNYVGV 237

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           ++   +P   +    +I D  +  +   L    + +I            +AKK +A  I 
Sbjct: 238 SE---APTEMFGKLMSITDTLMARYYLLLLGEDVPDI---------HPMDAKKQLARRIV 285

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSR-GMGLLTLIVKA-----GF 361
              HG E    A       F        +        + +     +++++V         
Sbjct: 286 ARYHGEEAGNAALEDFNTKFSKR----DVENAEWPVVDFAGVNQDIVSIVVAGYEKGYQI 341

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           A S  +ARR ++  +I+++   I++ K    L          L   KK  +  
Sbjct: 342 AKSRGDARRLVEQGSIQLHEEKITDPKATPTLA-----AGTVLKLDKKRAVRV 389


>gi|72080405|ref|YP_287463.1| tyrosyl tRNA synthetase [Mycoplasma hyopneumoniae 7448]
 gi|97201630|sp|Q4A8U9|SYY_MYCH7 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|71913529|gb|AAZ53440.1| tyrosyl tRNA synthetase [Mycoplasma hyopneumoniae 7448]
          Length = 414

 Score =  319 bits (818), Expect = 5e-85,   Method: Composition-based stats.
 Identities = 130/428 (30%), Positives = 208/428 (48%), Gaps = 36/428 (8%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           K +FL+ L  R  +  IS+P +   L  +     YIG+D TA+SLH G+   + LL  LQ
Sbjct: 6   KQEFLAELKTRNILKDISSPEKFFNL--KPDQGIYIGFDPTATSLHLGNYISISLLKRLQ 63

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           K G K ++++GG T +IGDPSF  + R+++  + +  N EKIK    SF           
Sbjct: 64  KIGIKVLAVIGGATGMIGDPSFSSKERKLLDFKTLNANKEKIKKQLESF--------GLP 115

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           + +N     ++  +D LR++G   +++ +L+ ESV SR+  E  LSF EF+Y ++Q +DF
Sbjct: 116 VFDNFEIYKNMNILDFLRDVGKNINISYLLAKESVASRI--EVGLSFTEFSYQLIQGWDF 173

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERL---KTPKLFALTSPLLTTASGTKMGKTL 241
             LA+NY    Q GGSDQWGN++ G+D  ++    +  + F  T+ LLT  +G K GK+L
Sbjct: 174 KFLAENYRIIGQAGGSDQWGNMVTGLDFIKKSNLDQKDEAFVFTTNLLTDENGQKFGKSL 233

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAK 299
              IWL+ EM SP++ +Q+  N  D         L+ L +  I+ +     K+      +
Sbjct: 234 GKPIWLDPEMYSPFHLYQFLLNQSDEQAEKIMLWLSFLDLKVINELIFKHKKDKKQRILQ 293

Query: 300 KIIATEITTMVHGREEAEKAATAAMECF-----------DMSIHSQHMPTISISKDEVSR 348
             +A ++   +HG +  E A       F           D     + +P   +S    ++
Sbjct: 294 YNLAKQVVFDIHGDKGLEIAKKITKILFEKLDYTKITFNDKLELKKIIPYFKVSFFNANQ 353

Query: 349 GMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGK 408
              ++ L    G   S  E    +   A++IN S ISN    I  +  D +    L  GK
Sbjct: 354 ---IIDL----GIFKSKRELNEFISHKALEINGSKISNIS-DITEELKDKSNLFLLRKGK 405

Query: 409 KNHIICHL 416
           K   +  L
Sbjct: 406 KYFFMIEL 413


>gi|238583408|ref|XP_002390231.1| hypothetical protein MPER_10524 [Moniliophthora perniciosa FA553]
 gi|215453410|gb|EEB91161.1| hypothetical protein MPER_10524 [Moniliophthora perniciosa FA553]
          Length = 480

 Score =  319 bits (818), Expect = 5e-85,   Method: Composition-based stats.
 Identities = 114/428 (26%), Positives = 185/428 (43%), Gaps = 65/428 (15%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L+ERGFI Q + P EL    +      Y G D T  SLH GHL   M L   Q  G
Sbjct: 93  LYETLTERGFIQQATRPDELKNALASSPQIVYAGIDPTDRSLHIGHLLPFMCLLHFQLQG 152

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL--- 124
           H  I L+GG T ++GDPS R   R     + ++ N+  +      F ++ +    +    
Sbjct: 153 HGIIPLIGGATGLVGDPSGRKTEREPTDVKLVESNVLALSNSIKHFFRHASQYAQSRVPF 212

Query: 125 -----------MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLE 173
                      + +N  W      ++ LR +G                            
Sbjct: 213 SFEKEPTLGLEVKSNLVWHKDFNMLEFLRIVGIH-------------------------- 246

Query: 174 FNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL-----KTPKLFALTSPL 228
                 +AYDF  L +++ C +Q+GGSDQWGNI+ G++L  RL          F +T+PL
Sbjct: 247 -----ARAYDFYYLHEHHQCTIQIGGSDQWGNILAGLELIGRLKHSETDGGSAFGITTPL 301

Query: 229 LTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA 288
           LTTASG K GK+   A+WL+ ++TS ++F+QY+  ++DADV  + K  T LP+SEI  + 
Sbjct: 302 LTTASGEKFGKSAGNAVWLDPQLTSVFDFYQYFLKVEDADVEKYLKLFTLLPLSEIREIV 361

Query: 289 KLQ--GKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV 346
                  E   A++ +A E+T     + +A+    A              P +     E 
Sbjct: 362 FSHKMAPEKRIAQRRLADEVTDQ---QLDAQSLIQAFESD----------PRLKWCSKEE 408

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
                ++ L  + G  +ST+ AR+ +++  + +N+  +      ++ +         +  
Sbjct: 409 LTSTSVMKLASRYGLVSSTSAARQLIQARGLYVNDKTVPEIHFTMQEEQLLDGRIAVIRA 468

Query: 407 GKKNHIIC 414
           GK   +I 
Sbjct: 469 GKDKVLIL 476


>gi|116073605|ref|ZP_01470867.1| tyrosyl-tRNA synthetase [Synechococcus sp. RS9916]
 gi|116068910|gb|EAU74662.1| tyrosyl-tRNA synthetase [Synechococcus sp. RS9916]
          Length = 415

 Score =  318 bits (816), Expect = 9e-85,   Method: Composition-based stats.
 Identities = 86/389 (22%), Positives = 153/389 (39%), Gaps = 29/389 (7%)

Query: 32  SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESR 91
               +   +G D T S +H GH      L   Q  GH  + ++G  T+ IGDP+ +  +R
Sbjct: 42  EGRPLRIKLGIDPTGSDIHLGHSILFRKLRAFQDAGHTAVLIIGDFTARIGDPTGKSATR 101

Query: 92  RMMRSQEIQENIEKIKGIF-------SSFIKYGTGKTDALMLNNETWLCSIKYIDLLREI 144
             +  ++++ N                + + + T      +  N  WL  +    ++  +
Sbjct: 102 VQLTKEQVESNATTYLRQLGQGQPKEQALLDFETP-GRLEVRRNSEWLEGLDLPQVIGLL 160

Query: 145 GSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWG 204
           G   +V +ML+ +    R      ++  EF Y +LQ YD V +  +    +++GG+DQ  
Sbjct: 161 G-TATVGQMLAKDDFSKRYGSGTPIALHEFLYPLLQGYDSVAVDAD----VELGGTDQKF 215

Query: 205 NIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
           N+  G DL         F +  P+L    G  KM K+L   + L ++   P + +     
Sbjct: 216 NVAMGRDLQRHFGQRTQFGMLLPILVGLDGVQKMSKSLGNVVGLEED---PLSMYSKLEK 272

Query: 264 IDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAA 323
           + D  +  +            D   +   +   E +K +A  +T   HG + A KA T A
Sbjct: 273 VGDGAIDDYV-------TLLTDLDLETLPENPREKQKAMALAVTASRHGNDAAAKAQTDA 325

Query: 324 MECFDMSIHSQ-HMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNS 382
                 S  +   +P  S++  EV+       L    G   S++EARR +K  A ++   
Sbjct: 326 ASLVGGSGDAGADVPEASLA--EVNFPAKAFYLFSAVGICASSSEARRQIKGGAARLEGE 383

Query: 383 IISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
            I++   +             L  GKK  
Sbjct: 384 KITDPNQEFASAAELEGK--VLQLGKKTF 410


>gi|158336483|ref|YP_001517657.1| tyrosyl-tRNA synthetase [Acaryochloris marina MBIC11017]
 gi|158306724|gb|ABW28341.1| tyrosyl-tRNA synthetase [Acaryochloris marina MBIC11017]
          Length = 404

 Score =  317 bits (812), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 97/398 (24%), Positives = 170/398 (42%), Gaps = 23/398 (5%)

Query: 19  HQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGT 78
            Q  +     +  +   +   +G D T + LH GH   +  L   Q  GHK + ++G  T
Sbjct: 24  QQEDDNLAHRLENADQPLRIKLGIDPTGTDLHLGHSLPIRKLRAFQDLGHKAVLIIGDFT 83

Query: 79  SIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYI 138
           + +GDP+ + E RR +   E+Q NI+         + + T      +  N  WL  I   
Sbjct: 84  ARVGDPTGKSEVRRQLTEAEVQHNIQTYLDQIKPILDFETPDR-LEVRYNSEWLSKIDLA 142

Query: 139 DLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMG 198
             L E+ +  +V +ML+ E    R ++   +   EF Y +LQ YD V +    +  +++G
Sbjct: 143 KTL-ELLTTMTVGQMLAKEGFAERYQQGTPVYLHEFLYPLLQGYDSVAV----EADVELG 197

Query: 199 GSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNF 257
           G+DQ  NI  G DL         F L +P+L    G  KM K+L+  + L ++     + 
Sbjct: 198 GTDQKFNIAIGRDLQRHFGLRPQFGLLTPILLGTDGVQKMSKSLNNYVGLAEDAV---SM 254

Query: 258 WQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAE 317
           +       DA +  + + LT L + ++            E +K++A  + +  H    A 
Sbjct: 255 YSKLEKTPDALLPEYFEHLTNLSLKDLPE-------NPREQQKLLAHTVVSQYHSVAIAN 307

Query: 318 KAATAAMECFDMSIHSQH--MPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSN 375
           +   +          SQ   +P  S++  EV+    L  L+  +G  +S+++ARR +K  
Sbjct: 308 ETQQSLAAMVTQGDMSQTDVIPEYSLA--EVTFPAKLFYLLSASGLCSSSSDARRQIKGG 365

Query: 376 AIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
           A+K++ + I+         D        L  GKK  I 
Sbjct: 366 AVKLDGTKITVVDQTYDQPDDLIGA--VLQVGKKKFIR 401


>gi|304372917|ref|YP_003856126.1| Tyrosyl tRNA synthetase 1 [Mycoplasma hyorhinis HUB-1]
 gi|304309108|gb|ADM21588.1| Tyrosyl tRNA synthetase 1 [Mycoplasma hyorhinis HUB-1]
 gi|330723495|gb|AEC45865.1| tyrosyl-tRNA synthetase [Mycoplasma hyorhinis MCLD]
          Length = 418

 Score =  316 bits (810), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 118/430 (27%), Positives = 212/430 (49%), Gaps = 38/430 (8%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           K + L  +  RG +  IS+ ++L  +     +  Y+G+D TA SLH G+   + L    Q
Sbjct: 4   KEELLKEIKLRGILKDISDEKKLLNMRQNEGI--YVGFDPTAKSLHLGNYILINLAQRFQ 61

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + G K I+++GG T +IGDPSF  + R ++ ++ I +N   IK     F        D  
Sbjct: 62  RAGVKTIAVLGGATGMIGDPSFVSKERVLLSNEAIIKNKNYIKAQLEKF--------DLQ 113

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           + +N      +  +D LR++G   +V  +L+ +S+ SR+K    LSF EF+Y ++QA+DF
Sbjct: 114 VFDNFDIYKDMNVLDFLRDVGKNVNVALLLTKDSIASRIK--TGLSFTEFSYQLIQAWDF 171

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGE-----RLKTPKLFALTSPLLTTASGTKMGK 239
             L   ++   Q+GGSDQWGNI+ G+D+ +        +   F LT+ LLT  +G K GK
Sbjct: 172 KYLFDKFNIVGQLGGSDQWGNIVQGLDMIKKTSLEDKNSSPCFGLTTQLLTDENGNKFGK 231

Query: 240 TL--SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE 297
           T     A+WL+  +TSP+  +Q+  N+ D     F K  +    SEI+++ +   +   E
Sbjct: 232 TTFDGDALWLDSNLTSPFKLYQFLINLSDFQAEKFFKWTSFKTFSEIEKILQKHSQNKKE 291

Query: 298 --AKKIIATEITTMVHGREEAEKAATAAMECF-----------DMSIHSQHMPTISISKD 344
              +  +  EI   +HG++  E+    +   F           D+ + ++ +    + + 
Sbjct: 292 KFLQHQMTQEIILNLHGQKTLEQCLKISSLLFKNLSFELLNQADLDLLAKSIDNFVLQES 351

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           E +        +V+    +S  E    +K +A+++N  II +++ +I  +   +   + +
Sbjct: 352 EFNANK-----LVELKIFSSKRELNEFIKDSALQVNGQIIKSQE-EINSKLKQNFSKLLI 405

Query: 405 SFGKKNHIIC 414
             GKKN  + 
Sbjct: 406 KKGKKNFFVV 415


>gi|55821068|ref|YP_139510.1| tyrosyl-tRNA synthetase E [Streptococcus thermophilus LMG 18311]
 gi|55822994|ref|YP_141435.1| tyrosyl-tRNA synthetase E [Streptococcus thermophilus CNRZ1066]
 gi|81559384|sp|Q5LZR6|SYY2_STRT1 RecName: Full=Tyrosyl-tRNA synthetase 2; AltName:
           Full=Tyrosine--tRNA ligase 2; Short=TyrRS 2
 gi|81560583|sp|Q5M4D1|SYY2_STRT2 RecName: Full=Tyrosyl-tRNA synthetase 2; AltName:
           Full=Tyrosine--tRNA ligase 2; Short=TyrRS 2
 gi|55737053|gb|AAV60695.1| tyrosyl-tRNA synthetase E [Streptococcus thermophilus LMG 18311]
 gi|55738979|gb|AAV62620.1| tyrosyl-tRNA synthetase E [Streptococcus thermophilus CNRZ1066]
          Length = 302

 Score =  315 bits (809), Expect = 6e-84,   Method: Composition-based stats.
 Identities = 106/305 (34%), Positives = 156/305 (51%), Gaps = 11/305 (3%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L  RG + Q S+   L    + G +T YIG D TA SLH GH +  ++   L K G
Sbjct: 3   LFEDLQWRGLVKQYSS-DSLIEKLNNGKLTFYIGTDPTADSLHLGHYSSFLIAKRLAKYG 61

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+PI L+GG T+++GDP    E R +   ++I +N EK+K        Y        ++N
Sbjct: 62  HQPIILIGGATALVGDPRGTSE-RDLAEQEKIFDNFEKLKNQIQKIFPYE-------IVN 113

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W  +I  ID LRE G   +   M + E V+ +      +SF EF+YM+LQ  DF  L
Sbjct: 114 NYDWTKNIMAIDFLREFGKHITAGYMSNKELVKRQFA--TGISFTEFSYMLLQGMDFYHL 171

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
                  LQ+ GSDQWGN+  GIDL  +    ++FA+T PL+T   G K GK+   AIW+
Sbjct: 172 FTTKGVTLQIAGSDQWGNMTTGIDLVRKKTGEEVFAMTMPLITDEEGKKFGKSEGNAIWI 231

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           ++   +P     +  N+ D  V+S  K+LT L   +I+ +          A+ I+A  +T
Sbjct: 232 SENKNTPEELHNFLLNVSDDIVISLLKKLTFLSRKDIEEIESRHKNGTGYAQGILADTVT 291

Query: 308 TMVHG 312
             +HG
Sbjct: 292 FDIHG 296


>gi|135195|sp|P28669|SYYM_PODAN RecName: Full=Tyrosyl-tRNA synthetase, mitochondrial; AltName:
           Full=Tyrosine--tRNA ligase; Short=TyrRS; Flags:
           Precursor
 gi|3109|emb|CAA38725.1| mitochondrial tyrosyl t-RNA synthetase [Podospora anserina]
          Length = 640

 Score =  315 bits (808), Expect = 7e-84,   Method: Composition-based stats.
 Identities = 114/468 (24%), Positives = 203/468 (43%), Gaps = 69/468 (14%)

Query: 9   LSILSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
             +  ERG++   +   E +  L     + AY G D TA SLH GHL  LM +FW+   G
Sbjct: 69  WDMFVERGYVKDTAGSHETIRKLMLHKRIGAYTGIDPTAPSLHIGHLLPLMPIFWMYMHG 128

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFI--------KYGTG 119
           +   +L+GG T+ IGDP+ R  SR  ++  ++  N+ KI     +          + G  
Sbjct: 129 YAGYTLIGGATAKIGDPTDRLVSRTPLKRTDLTMNLTKIHYQLKALWMNVEEQARRRGFE 188

Query: 120 KTDAL---MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNY 176
           K  A    ++NN TW  S+  I++L+ +G    +  +LS ++V++++ +   +SF EF Y
Sbjct: 189 KDWAWKRAVVNNSTWWNSLPLIEVLKRLGDSMRMGPLLSRDTVKNKMSKGDGMSFSEFTY 248

Query: 177 MILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK--------------LF 222
            ++Q +D+  + +    ++Q+GGSDQ+GNI+ G++  + ++  +                
Sbjct: 249 PLMQGWDWWHMYQANGIQMQIGGSDQYGNIVTGVETVKVVRDNEPDPAKKIEGGPFNDPV 308

Query: 223 ALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMS 282
             T PLLT ++G K GK+   A +L+K  TS ++ + Y+    D +V    K  T LPM 
Sbjct: 309 GFTVPLLTDSAGVKFGKSAGNA-FLDKFQTSEFDLYGYFVRRSDQEVEKLLKLFTFLPME 367

Query: 283 EIDRMAKLQGKEI--NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIH-------- 332
            I+   K+  +      A+ ++A E+  +VHG   A + A      +   I         
Sbjct: 368 NINEAMKIHSENPARRVAQHLLAFEVVGLVHGMNAAHRTALNHQARYGKQIDIPGVTLRM 427

Query: 333 ----SQHMPTISISK--------DEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKIN 380
               ++  P   +          + +  G  +  ++  AG A S +E  R        I 
Sbjct: 428 PKAATEDTPPSILDAPKMDMQLPESLIMGKSIGRILYAAGLAKSASEGHRLATQQGAYIG 487

Query: 381 ---------NSIISN--------EKLQIKLQD---FDSTGNIKLSFGK 408
                    ++ + +         KL    +          + L  GK
Sbjct: 488 AMPGHKRTEDNKVMDYSQLSFTPIKLWFPQETRNYLIDGKLLILRKGK 535


>gi|253687860|ref|YP_003017050.1| tyrosyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|251754438|gb|ACT12514.1| tyrosyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           carotovorum PC1]
          Length = 400

 Score =  315 bits (808), Expect = 9e-84,   Method: Composition-based stats.
 Identities = 92/398 (23%), Positives = 165/398 (41%), Gaps = 27/398 (6%)

Query: 24  PRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIG 82
            ++L++   +   +   +G+D TA  LH GH   L  L   Q  GH  + ++G  T+ IG
Sbjct: 24  EKKLELAAKENRKLVIKLGFDPTAPDLHLGHAVVLRKLKQFQDAGHDIVIIIGDFTAAIG 83

Query: 83  DPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLR 142
           DP+ R++ R  +  ++I  N +         I      +   +  N  W   + + +++ 
Sbjct: 84  DPTGRNKLRPPLSEKQITLNSQTYLDQLGQIID----TSRIQVRRNSEWFRKMPFSEIIG 139

Query: 143 EIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQ 202
            + S  ++ +M+  +  ++R      +   E  Y ILQ YD V +  +    +++GG+DQ
Sbjct: 140 LV-SRVTLAQMMQRDDFKNRYAASSPIHLHELLYPILQGYDSVMINAD----IELGGTDQ 194

Query: 203 WGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYW 261
             N + G  L E   +     +T PLL    G  KM K+    I L     SP + +   
Sbjct: 195 LFNNMVGRMLQESFGSEGQAVMTMPLLEGLDGKDKMSKSKGNYIALT---DSPEDIYGKI 251

Query: 262 RNIDDADVVSFAKRLTTLPMSEI--DRMAKLQGKEINEAKKIIATEITTMVHGREEAEKA 319
            ++ D  ++S+    +     +I   R    +GK     KK +A +I  + H  E A+ A
Sbjct: 252 MSLPDHLIISYLTLASNASEEDIIEAREQMERGKNPILLKKDLAHQIVGIYHDVEAADAA 311

Query: 320 ATAAMECFDMS--IHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAI 377
                  F         H+P I     +    + L+    +A    S +E RR ++S A+
Sbjct: 312 GKHFERVFQQHNPTEEDHLPLI----VDGDVRLTLIDFCSQALAEMSRSELRRLIRSGAV 367

Query: 378 KINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +IN     +E   I  +       + L  GK +  I  
Sbjct: 368 RINTHKEIDELAMINPE-----PGMLLWLGKHHRFIVK 400


>gi|61680508|pdb|1Y42|X Chain X, Crystal Structure Of A C-Terminally Truncated Cyt-18
           Protein
 gi|164519509|pdb|2RKJ|A Chain A, Cocrystal Structure Of A Tyrosyl-Trna Synthetase Splicing
           Factor With A Group I Intron Rna
 gi|164519510|pdb|2RKJ|B Chain B, Cocrystal Structure Of A Tyrosyl-Trna Synthetase Splicing
           Factor With A Group I Intron Rna
 gi|164519511|pdb|2RKJ|E Chain E, Cocrystal Structure Of A Tyrosyl-Trna Synthetase Splicing
           Factor With A Group I Intron Rna
 gi|164519512|pdb|2RKJ|F Chain F, Cocrystal Structure Of A Tyrosyl-Trna Synthetase Splicing
           Factor With A Group I Intron Rna
 gi|164519513|pdb|2RKJ|I Chain I, Cocrystal Structure Of A Tyrosyl-Trna Synthetase Splicing
           Factor With A Group I Intron Rna
 gi|164519514|pdb|2RKJ|J Chain J, Cocrystal Structure Of A Tyrosyl-Trna Synthetase Splicing
           Factor With A Group I Intron Rna
 gi|164519515|pdb|2RKJ|M Chain M, Cocrystal Structure Of A Tyrosyl-Trna Synthetase Splicing
           Factor With A Group I Intron Rna
 gi|164519516|pdb|2RKJ|N Chain N, Cocrystal Structure Of A Tyrosyl-Trna Synthetase Splicing
           Factor With A Group I Intron Rna
          Length = 392

 Score =  314 bits (805), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 109/351 (31%), Positives = 178/351 (50%), Gaps = 31/351 (8%)

Query: 5   KSDFLSILSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           K +   +  ERG++   +  +E +  L     + AY+G D TA SLH GHL  LM LFW+
Sbjct: 33  KQNTWDLFEERGYVKDTAGTKEHIAELMRTRRIGAYVGIDPTAPSLHVGHLLPLMPLFWM 92

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
              G+K  +L+GG T+ IGDP+ R +SR  + S +   N+ KI        +    +  A
Sbjct: 93  YLEGYKAFTLIGGSTAKIGDPTGRLKSRDHLSSSDATMNMTKIHYQLKKLWENVDTQMRA 152

Query: 124 L-----------MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFL 172
                       ++NN  W      +++LR +G    +  MLS ++V++++ +   +SF 
Sbjct: 153 RGYEADWARKRGIVNNNHWWNKQPMLEVLRRVGHALRIGPMLSRDTVKNKMTQGDGVSFA 212

Query: 173 EFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT-------------- 218
           EF Y I+Q +D+ EL      ++Q+GGSDQ+GNII G+++ +  +               
Sbjct: 213 EFTYPIMQGWDWFELFYQQGVQMQIGGSDQYGNIISGLEVVKAARESEPDPQERKYVTPK 272

Query: 219 ---PKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKR 275
               +    T PLLT +SG K GK+   AIWL+   TS ++F+ Y+    D +V +  K 
Sbjct: 273 TALDECVGFTVPLLTDSSGAKFGKSAGNAIWLDPYQTSVFDFYGYFVRRSDQEVENLLKL 332

Query: 276 LTTLPMSEIDRMAKLQGKEI--NEAKKIIATEITTMVHGREEAEKAATAAM 324
            T +P+SEI +  +   K+     A+  +A E+ T+VHG++EA  A     
Sbjct: 333 FTFMPISEITKTMEEHIKDPSKRVAQHTLAREVVTLVHGKQEASAAEDQHR 383


>gi|153820322|ref|ZP_01972989.1| tyrosyl-tRNA synthetase [Vibrio cholerae NCTC 8457]
 gi|126509136|gb|EAZ71730.1| tyrosyl-tRNA synthetase [Vibrio cholerae NCTC 8457]
          Length = 311

 Score =  314 bits (804), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 79/325 (24%), Positives = 140/325 (43%), Gaps = 17/325 (5%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M + ++    I  +RG    I     +  L     +   +G D TA  +H GH   L  L
Sbjct: 1   MASIEAALAEI--KRGVEELIPEEELIAKLKENRPLRIKLGADPTAPDIHLGHTVILNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GH    L+G  T ++GDP+ ++ +R  +  +++  N E  K      +     K
Sbjct: 59  RTFQDLGHDVTFLIGDFTGMVGDPTGKNTTRPPLTREDVLRNAETYKQQVFKILDPAKTK 118

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N  WL  +    ++R + S  +V RML  +  + R    Q ++  EF Y +LQ
Sbjct: 119 ----IQFNSEWLSKLGAEGMIR-LASNQTVARMLERDDFKKRYNNGQPIAIHEFMYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGK 239
            YD V +    +  +++GG+DQ  N++ G +L +         L  PLL    G  KM K
Sbjct: 174 GYDSVAM----ETDVELGGTDQKFNLLMGRELQKANGQKPQVVLMMPLLVGLDGEKKMSK 229

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINE 297
           +    I +++   +P   +    +I D  + S+ + L+  P+ E+ +       G    +
Sbjct: 230 SAHNYIGVSE---APSEMFGKIMSISDDLMWSYYELLSFRPLEEVAQFKAEVANGANPRD 286

Query: 298 AKKIIATEITTMVHGREEAEKAATA 322
            K ++A EI    H + +A+ A   
Sbjct: 287 IKILLAKEIIARFHSQADADAAEQE 311


>gi|296811028|ref|XP_002845852.1| tyrosyl-tRNA synthetase [Arthroderma otae CBS 113480]
 gi|238843240|gb|EEQ32902.1| tyrosyl-tRNA synthetase [Arthroderma otae CBS 113480]
          Length = 550

 Score =  313 bits (802), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 118/478 (24%), Positives = 194/478 (40%), Gaps = 103/478 (21%)

Query: 5   KSDFLSILSERGFIHQIS-NPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           +  FLS + ERG +H +  +   LD + +   V  Y G D TA S+H GH+   M+L W 
Sbjct: 20  RQSFLSFMEERGLVHSVIGDRDVLDKMITNKRVGLYAGIDPTAPSMHVGHMLPFMVLGWA 79

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
              G K + L+GG TS +GDP+ R  +R ++ +   +  I  +                 
Sbjct: 80  YVHGMKSVWLLGGSTSRVGDPTGRTTARPLLSNASRKAYIANMHMQ-------------- 125

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
                            L+++G       ML  E V++RL+    +SF EF Y I+QA+D
Sbjct: 126 -----------------LKKLG-----GTMLGREPVKTRLESGSGMSFTEFCYPIMQAWD 163

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERL--------------KTPKLFALTSPLL 229
           +  L +     +Q+GGSDQ GNI  GID  +++                     LT PLL
Sbjct: 164 WWHLYQK-GITIQVGGSDQSGNIQFGIDTIKQILKTSPIERKPGEDPDLSTPIGLTVPLL 222

Query: 230 TTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK 289
           TT++G K+GK+   +IWL+K+MTS Y+ +QY+    D D+    K  T +P S I  + +
Sbjct: 223 TTSTGEKIGKSAGNSIWLDKDMTSTYDLYQYFMRQPDQDMERLLKLFTFIPTSRIHEIVE 282

Query: 290 LQGKEI--NEAKKIIATEITTMVHGREEAEKAATAAMECFDMS--------------IHS 333
              K      A+  +A E   ++HG +EAE+A+ A    F                 +  
Sbjct: 283 EHNKSPSLRLAQHTLAQEFVELIHGAKEAEEASKAHKAIFQPQSSTSPKSEAANSIPLLP 342

Query: 334 QHMPTI---------------SISKDEVSRGMGLL------TLIVKAGFATSTNEARRHL 372
             +P                 +     ++    ++       ++  AG  +S  E  R +
Sbjct: 343 SGIPEFINAGVNKKAPQMNAFTAPTHHLTLPRSMVVGQYFHKILYAAGMVSSKQEGFRII 402

Query: 373 KSNAIKIN---------NSIISNEKLQ-----IKLQDFDSTGNIKLSFGKKNHIICHL 416
            +N   +             +S   L+     +  +       + L  GK    I  +
Sbjct: 403 VNNGASVGCMPSGAEQMGDALSFIPLRTWPADVTEKFIIDGSLLILRIGKWRVKIIKI 460


>gi|78779811|ref|YP_397923.1| tyrosyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9312]
 gi|115305814|sp|Q319F8|SYY_PROM9 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|78713310|gb|ABB50487.1| tyrosyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9312]
          Length = 412

 Score =  312 bits (800), Expect = 7e-83,   Method: Composition-based stats.
 Identities = 94/401 (23%), Positives = 176/401 (43%), Gaps = 28/401 (6%)

Query: 18  IHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGG 77
           I Q  +    D   +   +   +G D T + +H GH      L   Q  GH  + ++G  
Sbjct: 24  IDQTFSEIIDDAKKNNKKLRVKLGIDPTGTDIHLGHSILFKKLRAFQDNGHIAVLIIGDF 83

Query: 78  TSIIGDPSFRDESRRMMRSQEIQENIEKIKGIF-------SSFIKYGTGKTDALMLNNET 130
           T+ IGDP+ ++++R  +  +++++N +              S + + + K    +  N  
Sbjct: 84  TAQIGDPTGKNKTRVQLSEKQVKDNAKTYLTQLGMGKPANESILDFDS-KDKIEIRYNSE 142

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           WL  +    ++  +GS  +V++ML+ E    R   +  ++  EF Y +LQ YD V +  +
Sbjct: 143 WLKGLNLNSIIELMGS-ATVSQMLAKEEFNKRYNSQVPIALHEFLYPLLQGYDSVVVQSD 201

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNK 249
               +++GG+DQ  NI  G DL    K    F +  P+LT   G  KM K+    + L +
Sbjct: 202 ----IELGGTDQKFNIAIGRDLQRHFKQEPQFGVLLPILTGLDGIKKMSKSEFNTVGLTE 257

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTM 309
           +     + +     + D  + ++ + LT L +S       L      E ++ +A E+TT+
Sbjct: 258 DSL---SMYSKLEKVPDNIIPTYFELLTELDLS------VLNDANPRELQRRMALEVTTL 308

Query: 310 VHGREEAEKAATAAMECF-DMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
            HG EEA KA +   + F         +P IS+   ++   +    L+       S++E+
Sbjct: 309 FHGAEEASKAQSNCEKLFLGHKEKVGEIPEISLK--DIVFPVKFFYLLSSLKLFKSSSES 366

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
           +R +K   +KI++  + N  +    +         L  GKK
Sbjct: 367 KRSIKGGGVKIDSQKVINPDIVFDSKKDLEGK--ILQIGKK 405


>gi|146301128|ref|YP_001195719.1| tyrosyl-tRNA synthetase [Flavobacterium johnsoniae UW101]
 gi|146155546|gb|ABQ06400.1| predicted tyrosyl-tRNA synthetase [Flavobacterium johnsoniae UW101]
          Length = 400

 Score =  311 bits (798), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 109/414 (26%), Positives = 181/414 (43%), Gaps = 28/414 (6%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFW 62
            K +    L E G         +L+    +   +   +G+D TA  LH GH   L  L  
Sbjct: 7   LKENTAIFLPENGL------EEKLNQAEKENRKLIIKLGFDPTAPDLHLGHAVVLKKLKQ 60

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD 122
            Q  GH+ + L+G  T+ IGDP+ +++SR+ +  QE+Q N E      S  I        
Sbjct: 61  FQDLGHQIVILVGSFTARIGDPTGKNKSRKPLNVQEVQHNAETYIAQLSKIIDV----EK 116

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
           A ++ N  WL S+ + +++ +I S  +V +++       R      ++  E  Y ILQ +
Sbjct: 117 AQIVFNSDWLDSLSFSEVI-QIMSNVTVAQLMQRNDFNKRFTENTPIAMHELVYPILQGF 175

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTL 241
           D V++  +    ++MGG+DQ  N   G  L E  K      +  PLL    G  KM K+L
Sbjct: 176 DSVKINAD----IEMGGTDQLFNCTMGRQLQETFKKSPQIVMCMPLLRGLDGKEKMSKSL 231

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA-KLQGKEINEAKK 300
           +  I L  E   P   +    +I D  ++ F +  T     E   +  +L+ +     KK
Sbjct: 232 NNIIGLTDE---PNEMFGKTMSIPDDLILEFLELTTDFSTKEKQEIKNRLKEENPMNIKK 288

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQH--MPTISISKDEVSRGMGLLTLIVK 358
           IIA  I    H  ++A+KA    +  F      +   +P +  S +  S  M L+ L   
Sbjct: 289 IIAKNIINQYHDEKKADKAEDFFVNQFQNKNFEEKSFVPVLISSLENKSDQMALIDLCAF 348

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
                + +  RR ++S A+++NN  I+N    I+L+        K+  GK+N  
Sbjct: 349 IKNDITKSANRRLIESGAVQVNNLKITNPYELIELK-----KETKIKIGKRNFY 397


>gi|167945808|ref|ZP_02532882.1| tyrosyl-tRNA synthetase [Endoriftia persephone 'Hot96_1+Hot96_2']
          Length = 304

 Score =  310 bits (794), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 80/324 (24%), Positives = 141/324 (43%), Gaps = 23/324 (7%)

Query: 97  QEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSF 156
           +++ EN +  +      +          ++ N +W+  ++  DL++  G + +V RML  
Sbjct: 1   EQVLENAQTYEHQIFEILD----PERTTIVFNSSWMGEMRAADLIQLAGKY-NVARMLER 55

Query: 157 ESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL 216
           +    R    QS++  EF Y ++Q YD V L  +    +++GG+DQ  N++ G +L  + 
Sbjct: 56  DDFSKRYSSGQSIAIHEFLYPLVQGYDSVALKAD----VELGGTDQKFNLLVGRELQRQY 111

Query: 217 KTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKR 275
              +   LT P+L    G  KM K+L   I +     +P + +    +I D  +  + + 
Sbjct: 112 GQEQQVILTMPILEGLDGVQKMSKSLGNYIGIT---DAPEDMFGKIMSISDDLMWRYLEL 168

Query: 276 LTTLPMSEIDRM--AKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS 333
           L+  PM EI+       QG    + K ++A E+    H    AE A    +  F      
Sbjct: 169 LSFRPMPEIESWRLEIEQGLNPRDVKILLAKELVGRFHDEAAAEAAHQTFVSRFQKGQIP 228

Query: 334 QHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL 393
             MP   +S  E   G+ +  L+   G   ST+EA R +K  A+KI+   I + KL+++ 
Sbjct: 229 DEMPEFELSAGE---GLPIANLLRDVGLVKSTSEAMRMIKQGAVKIDGEKIGDTKLRLE- 284

Query: 394 QDFDSTGNIKLSFGKKNHIICHLC 417
               S        GK+      L 
Sbjct: 285 ----SGEGFVCQVGKRRFARVTLV 304


>gi|313763460|gb|EFS34824.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL013PA1]
 gi|313816642|gb|EFS54356.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL059PA1]
 gi|314914619|gb|EFS78450.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL005PA4]
 gi|314919425|gb|EFS83256.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL050PA1]
 gi|314920668|gb|EFS84499.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL050PA3]
 gi|314930438|gb|EFS94269.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL067PA1]
 gi|314954509|gb|EFS98915.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL027PA1]
 gi|314957371|gb|EFT01474.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL002PA1]
 gi|315099087|gb|EFT71063.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL059PA2]
 gi|315100533|gb|EFT72509.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL046PA1]
 gi|327452799|gb|EGE99453.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL087PA3]
 gi|327457876|gb|EGF04531.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL083PA2]
 gi|328755357|gb|EGF68973.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL087PA1]
 gi|328757802|gb|EGF71418.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL025PA2]
          Length = 331

 Score =  309 bits (793), Expect = 4e-82,   Method: Composition-based stats.
 Identities = 102/327 (31%), Positives = 163/327 (49%), Gaps = 13/327 (3%)

Query: 93  MMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNR 152
           M   + + E +E IK   S ++    G+  A ++NN  W      +DLLR++G  FSVNR
Sbjct: 1   MNDREVVAEWVESIKDQVSKYVD-TDGRNTAQIVNNYDWTVKYTALDLLRDVGKHFSVNR 59

Query: 153 MLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL 212
           ML+ + V  RL+    +S+ EF+Y++LQ+ DF EL K Y C LQ G  DQWGNI  G + 
Sbjct: 60  MLARDVVARRLES--GISYTEFSYVLLQSLDFYELHKRYGCTLQTGAQDQWGNITAGAEF 117

Query: 213 GERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSF 272
             +     +  L +PL+T A GTK GKT SG +W++ E+TS Y F Q++ N +D+ V+ +
Sbjct: 118 IRKTTGDVVHGLVTPLITKADGTKYGKTESGTVWVDPELTSAYAFHQFFLNAEDSKVIEY 177

Query: 273 AKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIATEITTMVHGREEAEKAATAAMECFDMS 330
            K  +     EI+ +A+   +E     A+  +A ++T +VHG E+ + A  AA   F   
Sbjct: 178 LKIFSPRSREEIEDLARKTEEEPWRRAAQHCLADDLTDLVHGVEQRKAAEAAAQAIFGRG 237

Query: 331 IHSQHMPTISISKD--------EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNS 382
                     +S          E      ++  +V AG   + +  RR +      +NN 
Sbjct: 238 ELRDLDERTVLSLSDELGAAHHEGGEYPTVVGAMVAAGVVDTKSAGRRAVAEGGAYLNNV 297

Query: 383 IISNEKLQIKLQDFDSTGNIKLSFGKK 409
            +++   ++   DF       +  GKK
Sbjct: 298 KVADPDQRLTDDDFLCGRVALVRRGKK 324


>gi|315083446|gb|EFT55422.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL027PA2]
          Length = 331

 Score =  309 bits (792), Expect = 5e-82,   Method: Composition-based stats.
 Identities = 102/327 (31%), Positives = 163/327 (49%), Gaps = 13/327 (3%)

Query: 93  MMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNR 152
           M   + + E +E IK   S ++    G+  A ++NN  W      +DLLR++G  FSVNR
Sbjct: 1   MNDREVVAEWVESIKDQVSKYVD-TDGRNAAQIVNNYDWTVKYTALDLLRDVGKHFSVNR 59

Query: 153 MLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL 212
           ML+ + V  RL+    +S+ EF+Y++LQ+ DF EL K Y C LQ G  DQWGNI  G + 
Sbjct: 60  MLARDVVARRLES--GISYTEFSYVLLQSLDFYELHKRYGCTLQTGAQDQWGNITAGAEF 117

Query: 213 GERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSF 272
             +     +  L +PL+T A GTK GKT SG +W++ E+TS Y F Q++ N +D+ V+ +
Sbjct: 118 IRKTTGDVVHGLVTPLITKADGTKYGKTESGTVWVDPELTSAYAFHQFFLNAEDSKVIEY 177

Query: 273 AKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIATEITTMVHGREEAEKAATAAMECFDMS 330
            K  +     EI+ +A+   +E     A+  +A ++T +VHG E+ + A  AA   F   
Sbjct: 178 LKIFSPRSREEIEDLARKTEEEPWRRAAQHCLADDLTDLVHGVEQRKAAEAAAQAIFGRG 237

Query: 331 IHSQHMPTISISKD--------EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNS 382
                     +S          E      ++  +V AG   + +  RR +      +NN 
Sbjct: 238 ELRDLDERTVLSLSDELGAAHYEGGEYPTVVGAMVAAGVVDTKSAGRRAVAEGGAYLNNV 297

Query: 383 IISNEKLQIKLQDFDSTGNIKLSFGKK 409
            +++   ++   DF       +  GKK
Sbjct: 298 KVADPDQRLTDDDFLCGRVALVRRGKK 324


>gi|298243236|ref|ZP_06967043.1| tyrosyl-tRNA synthetase [Ktedonobacter racemifer DSM 44963]
 gi|297556290|gb|EFH90154.1| tyrosyl-tRNA synthetase [Ktedonobacter racemifer DSM 44963]
          Length = 407

 Score =  309 bits (792), Expect = 5e-82,   Method: Composition-based stats.
 Identities = 96/396 (24%), Positives = 170/396 (42%), Gaps = 19/396 (4%)

Query: 25  RELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGD 83
            E   L   G  +    G D+TA  LH GH   L ++  +Q  GHK I L+G  T+ IGD
Sbjct: 28  EEFQRLMRSGRQLRIKYGVDVTAPFLHLGHAVNLWMMRKMQDLGHKVIFLIGDFTTTIGD 87

Query: 84  PSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLRE 143
           P+ R++ R ++  +EI+ N +         +++        +  N  W   +   +LLR 
Sbjct: 88  PTGRNKLRPIIPPEEIEANAQAFIAQARMVLRFDDQHL-LEIRRNSEWYKDMPVQELLRL 146

Query: 144 IGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQW 203
           + S  + +R++  +  + RLK+   +   E  Y +LQ YD   L  +    L + GSDQ 
Sbjct: 147 L-SMITHSRLIVRDMFQLRLKQGLDIHMHELLYPVLQGYDSFALDSD----LTIIGSDQL 201

Query: 204 GNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWR 262
            N + G    E L       +T+ +     G  K  K+L   I L     SP + +    
Sbjct: 202 FNELMGRFYQEHLGQSPQVVITTKITPGIDGKAKQSKSLGNYIGLGH---SPRDKFGRAM 258

Query: 263 NIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATA 322
            + D+ +V++ +  T +PM +++ + +   +E  + K  +A EI    HG+E AE+    
Sbjct: 259 KLPDSLIVTYFEIYTDIPMIDVEEIGQRVEQEPMQCKLRLAYEIVKRYHGKEVAEQEFFW 318

Query: 323 AMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNS 382
             E F      + +P +++ +  +   + LL L        S  E RR  +   +  N  
Sbjct: 319 FQETFSARQTPEDIPEMTLERG-IQTPLELLKLFFNGQ--KSNRELRRLCEQGGVSRNEE 375

Query: 383 IISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLCG 418
           ++   +  ++L D D         GK+      + G
Sbjct: 376 VLRQPEQMLELCDGD-----VFHVGKRTWFRVRVSG 406


>gi|89054283|ref|YP_509734.1| tyrosyl-tRNA synthetase [Jannaschia sp. CCS1]
 gi|88863832|gb|ABD54709.1| tyrosyl-tRNA synthetase [Jannaschia sp. CCS1]
          Length = 264

 Score =  309 bits (792), Expect = 5e-82,   Method: Composition-based stats.
 Identities = 123/264 (46%), Positives = 172/264 (65%), Gaps = 2/264 (0%)

Query: 153 MLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL 212
           ML+F+SV+SRL REQ+LSF+EFNYM+LQAYD++EL + + C LQMGGSDQWGNI+ G DL
Sbjct: 1   MLAFDSVKSRLDREQALSFIEFNYMLLQAYDYLELYRRHGCVLQMGGSDQWGNIVSGADL 60

Query: 213 GERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSF 272
             R+   + F LT+PL+T A G KMGK+  GA+WLN++  S Y FWQ+WRN+DDADV   
Sbjct: 61  IRRVDAGEAFGLTTPLVTRADGKKMGKSADGAVWLNEDRMSSYEFWQWWRNVDDADVAKL 120

Query: 273 AKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIH 332
            K  T L ++E DR+  L+G +IN AK I+A E+TT+ HG E A  A   A E F+    
Sbjct: 121 LKLFTELDVAECDRLGALEGSDINSAKIILANEVTTLCHGAEAAAAAEATAREVFEKGGT 180

Query: 333 SQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
              +PT+ ++ +EV  G+ ++ LI ++G A S  +A+R +     ++N+  I+   L + 
Sbjct: 181 GDDLPTLELNTEEVGDGISIVQLITRSGLAKSGKDAKRLIAEGGARLNDEAIAEAGLMVG 240

Query: 393 LQDFDSTGNIKLSFGKKNHIICHL 416
             D      IKLS GKK H +  L
Sbjct: 241 ASDL--GAPIKLSAGKKRHALVVL 262


>gi|313773434|gb|EFS39400.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL074PA1]
 gi|313793845|gb|EFS41874.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL110PA1]
 gi|313801235|gb|EFS42493.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL110PA2]
 gi|313808082|gb|EFS46559.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL087PA2]
 gi|313811449|gb|EFS49163.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL083PA1]
 gi|313813583|gb|EFS51297.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL025PA1]
 gi|313819721|gb|EFS57435.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL046PA2]
 gi|313822271|gb|EFS59985.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL036PA1]
 gi|313823736|gb|EFS61450.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL036PA2]
 gi|313829630|gb|EFS67344.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL063PA2]
 gi|313831189|gb|EFS68903.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL007PA1]
 gi|313834849|gb|EFS72563.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL056PA1]
 gi|313840035|gb|EFS77749.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL086PA1]
 gi|314923946|gb|EFS87777.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL001PA1]
 gi|314924567|gb|EFS88398.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL036PA3]
 gi|314962166|gb|EFT06267.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL002PA2]
 gi|314963795|gb|EFT07895.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL082PA1]
 gi|314966013|gb|EFT10112.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL082PA2]
 gi|314968378|gb|EFT12477.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL037PA1]
 gi|314974067|gb|EFT18163.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL053PA1]
 gi|314976753|gb|EFT20848.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL045PA1]
 gi|314978792|gb|EFT22886.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL072PA2]
 gi|314981824|gb|EFT25917.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL110PA3]
 gi|314984475|gb|EFT28567.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL005PA1]
 gi|314986653|gb|EFT30745.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL005PA2]
 gi|314990768|gb|EFT34859.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL005PA3]
 gi|315079647|gb|EFT51637.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL053PA2]
 gi|315081126|gb|EFT53102.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL078PA1]
 gi|315087013|gb|EFT58989.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL002PA3]
 gi|315089188|gb|EFT61164.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL072PA1]
 gi|315090692|gb|EFT62668.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL110PA4]
 gi|315094903|gb|EFT66879.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL060PA1]
 gi|315095242|gb|EFT67218.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL038PA1]
 gi|315104176|gb|EFT76152.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL050PA2]
 gi|315108920|gb|EFT80896.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL030PA2]
 gi|327327980|gb|EGE69749.1| tyrosine--tRNA ligase [Propionibacterium acnes HL103PA1]
 gi|327329577|gb|EGE71336.1| tyrosine--tRNA ligase [Propionibacterium acnes HL096PA3]
 gi|327329579|gb|EGE71337.1| tyrosine--tRNA ligase [Propionibacterium acnes HL096PA2]
 gi|327333962|gb|EGE75678.1| tyrosine--tRNA ligase [Propionibacterium acnes HL097PA1]
 gi|327444359|gb|EGE91013.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL043PA2]
 gi|327444577|gb|EGE91231.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL043PA1]
 gi|327446249|gb|EGE92903.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL013PA2]
 gi|327452167|gb|EGE98821.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL092PA1]
 gi|328752011|gb|EGF65627.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL020PA1]
 gi|328760141|gb|EGF73718.1| tyrosine--tRNA ligase [Propionibacterium acnes HL099PA1]
          Length = 331

 Score =  309 bits (791), Expect = 7e-82,   Method: Composition-based stats.
 Identities = 102/327 (31%), Positives = 163/327 (49%), Gaps = 13/327 (3%)

Query: 93  MMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNR 152
           M   + + E +E IK   S ++    G+  A ++NN  W      +DLLR++G  FSVNR
Sbjct: 1   MNDREVVAEWVESIKDQVSKYVD-TDGRNAAQIVNNYDWTVKYTALDLLRDVGKHFSVNR 59

Query: 153 MLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL 212
           ML+ + V  RL+    +S+ EF+Y++LQ+ DF EL K Y C LQ G  DQWGNI  G + 
Sbjct: 60  MLARDVVARRLES--GISYTEFSYVLLQSLDFYELHKRYGCTLQTGAQDQWGNITAGAEF 117

Query: 213 GERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSF 272
             +     +  L +PL+T A GTK GKT SG +W++ E+TS Y F Q++ N +D+ V+ +
Sbjct: 118 IRKTTGDVVHGLVTPLITKADGTKYGKTESGTVWVDPELTSAYAFHQFFLNAEDSKVIEY 177

Query: 273 AKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIATEITTMVHGREEAEKAATAAMECFDMS 330
            K  +     EI+ +A+   +E     A+  +A ++T +VHG E+ + A  AA   F   
Sbjct: 178 LKIFSPRSREEIEDLARKTEEEPWRRAAQHCLADDLTDLVHGVEQRKAAEAAAQAIFGRG 237

Query: 331 IHSQHMPTISISKD--------EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNS 382
                     +S          E      ++  +V AG   + +  RR +      +NN 
Sbjct: 238 ELRDLDERTVLSLSDELGAAHHEGGEYPTVVGAMVAAGVVDTKSAGRRAVAEGGAYLNNV 297

Query: 383 IISNEKLQIKLQDFDSTGNIKLSFGKK 409
            +++   ++   DF       +  GKK
Sbjct: 298 KVADPDQRLTDDDFLCGRVALVRRGKK 324


>gi|323302739|gb|EGA56545.1| Msy1p [Saccharomyces cerevisiae FostersB]
          Length = 372

 Score =  309 bits (791), Expect = 8e-82,   Method: Composition-based stats.
 Identities = 107/299 (35%), Positives = 149/299 (49%), Gaps = 19/299 (6%)

Query: 7   DFLSILSERGFIHQISNPRE-LDILCS-QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           + L  L +RG + Q+S P   L    +    +  Y G D TA SLH G+L  LM+L    
Sbjct: 55  NILDELKQRGLVSQVSQPESFLRTKLNGNDKIKLYCGVDPTAQSLHLGNLVPLMVLLHFY 114

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT------ 118
             GH  ++++GG T  +GDPS R   R +M +   Q N+  I      F K G       
Sbjct: 115 VKGHDIVTVIGGATGKVGDPSGRKTERDVMENDIRQNNVTSISQQLQRFFKNGLEYYRNR 174

Query: 119 -------GKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSF 171
                          NN  W   IK +D L + G    V  ML+ +S+ SRL+ +  L F
Sbjct: 175 CALTEDVPSGKYTPRNNFNWWKDIKMLDFLADFGRHIRVQSMLARDSISSRLQTKNGLGF 234

Query: 172 LEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL----GERLKTPKLFALTSP 227
            EF Y +LQAYDF  L K  +  +Q+GG+DQWGNI  GIDL             F +T P
Sbjct: 235 NEFTYQVLQAYDFYHLYKEENVTIQVGGNDQWGNITAGIDLINRIQPIKNKGLPFGITVP 294

Query: 228 LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR 286
           LLTTA+G K GK+   A++++  + + Y+ +Q++ N  DADV  F K  T L  SEI +
Sbjct: 295 LLTTATGEKFGKSAGNAVFIDPSINTAYDVYQFFYNTLDADVPKFLKIFTFLNSSEIKK 353


>gi|467158|gb|AAA50922.1| tyrosyl-tRNA synthetase [Mycobacterium leprae]
          Length = 293

 Score =  307 bits (787), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 97/287 (33%), Positives = 160/287 (55%), Gaps = 12/287 (4%)

Query: 135 IKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCR 194
           +  I+ LR++G  FS+N ML  +++R RL   Q +S+ EF+YM+LQA D+ EL + + C 
Sbjct: 1   MSAIEFLRDVGKHFSINLMLDRDTIRRRL-NGQGISYTEFSYMLLQANDYAELHQRHGCA 59

Query: 195 LQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT-LSGAIWLNKEMTS 253
           LQ+GGSDQWGNII G+ L  +     + ALT PL+T A G K+GK+   G++WL+ EMTS
Sbjct: 60  LQIGGSDQWGNIIAGVRLVRQKLGATVHALTVPLVTAADGAKLGKSTGGGSLWLDPEMTS 119

Query: 254 PYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATEITTMVH 311
           PY ++QY+ N  DADV+ + +  T L   E+  + +  +   +   A++ +ATE+T +VH
Sbjct: 120 PYAWYQYFINTSDADVIRYLRWFTFLLPEELVELEQTTVSRPQERAAQRRLATELTVLVH 179

Query: 312 GREEAEKAATAAMECFDMSIHSQ--------HMPTISISKDEVSRGMGLLTLIVKAGFAT 363
           G    +    A+   F     ++         +    +++ +     G++ L+V +G + 
Sbjct: 180 GAAATQAVEHASRALFGQGELARLDEATLATALRETVVAELKPGNPDGIVDLLVASGLSP 239

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
           S   ARR +    + +NN  I +E+   +  DF     + L  GK+N
Sbjct: 240 SRGAARRTIDEGGVLVNNIRIQSEEWTPRTSDFLHGRWLVLRRGKRN 286


>gi|313826058|gb|EFS63772.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL063PA1]
          Length = 331

 Score =  306 bits (785), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 101/327 (30%), Positives = 163/327 (49%), Gaps = 13/327 (3%)

Query: 93  MMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNR 152
           M   + + E +E IK   S ++    G+  A ++NN  W      +DLLR++G  FSVNR
Sbjct: 1   MNDREVVAEWVESIKDQVSKYVD-TDGRNAAQIVNNYDWTVKYTALDLLRDVGKHFSVNR 59

Query: 153 MLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL 212
           ML+ + V  RL+    +S+ EF+Y++LQ+ DF EL K Y C LQ G  DQWGNI  G + 
Sbjct: 60  MLARDVVARRLES--GISYTEFSYVLLQSLDFYELHKRYGCTLQTGAQDQWGNITAGAEF 117

Query: 213 GERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSF 272
             +     +  L +PL+T A GTK GKT SG +W++ E+TS Y F Q++ N +D+ V+ +
Sbjct: 118 IRKTTGDVVHGLVTPLITKADGTKYGKTESGTVWVDPELTSAYAFHQFFLNAEDSKVIEY 177

Query: 273 AKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIATEITTMVHGREEAEKAATAAMECFDMS 330
            K  +     +I+ +A+   +E     A+  +A ++T +VHG E+ + A  AA   F   
Sbjct: 178 LKIFSPRSREKIEDLARKTEEEPWRRAAQHCLADDLTDLVHGVEQRKAAEAAAQAIFGRG 237

Query: 331 IHSQHMPTISISKD--------EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNS 382
                     +S          E      ++  +V AG   + +  RR +      +NN 
Sbjct: 238 ELRDLDERTVLSLSDELGAAHHEGGEYPTVVGAMVAAGVVDTKSAGRRAVAEGGAYLNNV 297

Query: 383 IISNEKLQIKLQDFDSTGNIKLSFGKK 409
            +++   ++   DF       +  GKK
Sbjct: 298 KVADPDQRLTDDDFLCGRVALVRRGKK 324


>gi|315106695|gb|EFT78671.1| tyrosyl-tRNA synthetase [Propionibacterium acnes HL030PA1]
          Length = 331

 Score =  305 bits (783), Expect = 5e-81,   Method: Composition-based stats.
 Identities = 102/327 (31%), Positives = 163/327 (49%), Gaps = 13/327 (3%)

Query: 93  MMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNR 152
           M   + + E +E IK   S ++    G+  A ++NN  W      +DLLR++G  FSVNR
Sbjct: 1   MNDREVVAEWVESIKDQVSKYVD-TDGRNAAQIVNNYDWTVKYTALDLLRDVGKHFSVNR 59

Query: 153 MLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL 212
           ML+ + V  RL+    +S+ EF+Y++LQ+ DF EL K Y C LQ G  DQWGNI  G + 
Sbjct: 60  MLARDVVARRLES--GISYTEFSYVLLQSLDFYELHKRYGCTLQTGAQDQWGNITAGAEF 117

Query: 213 GERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSF 272
             +     +  L +PL+T A GTK GKT SG +W++ E+TS Y F Q++ N +D+ V+ +
Sbjct: 118 IRKTTGDVVHGLVTPLITKADGTKYGKTESGTVWVDPELTSAYAFHQFFLNAEDSKVIEY 177

Query: 273 AKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIATEITTMVHGREEAEKAATAAMECFDMS 330
            K  +     EI+ +A+   +E     A+  +A ++T +VHG E+ + A  AA   F   
Sbjct: 178 LKIFSPRSREEIEDLARKTEEEPWRRAAQHCLADDLTDLVHGVEQRKAAEAAAQAIFGRG 237

Query: 331 IHSQHMPTISISKD--------EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNS 382
                     +S          E      ++  +V AG   + +  RR +      +NN 
Sbjct: 238 ELRDLDERTVLSLSDELGAAHHEGGEYPTVVGAMVAAGVVDTKSGGRRAVAEGGAYLNNV 297

Query: 383 IISNEKLQIKLQDFDSTGNIKLSFGKK 409
            +++   ++   DF       +  GKK
Sbjct: 298 KVADPDQRLTDDDFLCGRVALVRRGKK 324


>gi|284044994|ref|YP_003395334.1| tyrosyl-tRNA synthetase [Conexibacter woesei DSM 14684]
 gi|283949215|gb|ADB51959.1| tyrosyl-tRNA synthetase [Conexibacter woesei DSM 14684]
          Length = 398

 Score =  305 bits (783), Expect = 6e-81,   Method: Composition-based stats.
 Identities = 94/395 (23%), Positives = 162/395 (41%), Gaps = 32/395 (8%)

Query: 25  RELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGD 83
           R+L++   +G  +   +G D TA  +H G    L  L   Q  GH  + ++G  T+ +GD
Sbjct: 30  RKLELAAREGRPLRVKLGIDPTAPDIHLGFTVVLGKLREFQDLGHTVVLIIGDYTARVGD 89

Query: 84  PSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLRE 143
           PS R  +R M+  ++I  N    +      +     +    +  N  WL      D L  
Sbjct: 90  PSGRSSTRPMLSGEQIDANATTFQQQALKVLDPARLE----VRRNGEWLD--MRTDELFG 143

Query: 144 IGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQW 203
           +    +V R+L  +    R      +S LE  Y +LQ YD V +  +    +++GG+DQ 
Sbjct: 144 LVRTTTVARILERDDFSKRYAARAPISILELLYPLLQGYDSVAVDAD----VELGGTDQK 199

Query: 204 GNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWR 262
            N++ G D+       +   LT P+L    G  KM K+L   I + +    P   +    
Sbjct: 200 FNLLLGRDIQTAYGRSEQVILTMPILPGIDGERKMSKSLGNYIGVTEP---PEEIYGKTL 256

Query: 263 NIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATA 322
            + D  + ++ + L   P+          G    +AK+ +A  +    H    AE A  A
Sbjct: 257 RLPDEALPTWYELLLGEPVP--------AGAPPRDAKRALARRLVARFHDDAAAEAAERA 308

Query: 323 AMECFDMSIHSQHMPTISISKDEVSRGMGLLTL--IVKAGFATSTNEARRHLKSNAIKIN 380
                      + MP  ++  D    G G++ L  ++ A F  S++EARR LK   +K++
Sbjct: 309 FDRVHVEHRPPEEMPDAALPVD----GAGVVHLPALLAAAFGVSSSEARRQLKQGGVKLD 364

Query: 381 NSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
              ++ + L     + D      L  GK+      
Sbjct: 365 GDPLAADPLDRPAAELDGR---VLQLGKRRFARLR 396


>gi|254431353|ref|ZP_05045056.1| tyrosyl-tRNA synthetase [Cyanobium sp. PCC 7001]
 gi|197625806|gb|EDY38365.1| tyrosyl-tRNA synthetase [Cyanobium sp. PCC 7001]
          Length = 437

 Score =  305 bits (781), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 87/399 (21%), Positives = 156/399 (39%), Gaps = 34/399 (8%)

Query: 32  SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESR 91
           +   +   +G D T + +H GH      L   Q  GH  + ++G  T+ IGDP+ +  +R
Sbjct: 60  NDRPLRVKLGIDPTGADIHLGHSLLFRKLRAFQDAGHTAVLIIGDFTARIGDPTGKSSTR 119

Query: 92  RMMRSQEIQENIEKIKGIF-------SSFIKYGTGKTDALMLNNETWLCSIKYIDLLREI 144
             + + E++ N E              S + + T      +  N  WL  +    ++  +
Sbjct: 120 VQLSAAEVEANAETYLLQLGLGQSRDQSLLDFETP-GRLEVRRNSEWLAGLALPQVIELL 178

Query: 145 GSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWG 204
           G+  +V +ML+ +    R      +S  EF Y +LQ YD V +  +    +++GG+DQ  
Sbjct: 179 GTS-TVGQMLAKDDFSKRYGSGTPISLHEFLYPLLQGYDSVAIQAD----VELGGTDQKF 233

Query: 205 NIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
           N+  G DL         F L  P+L    G  KM K+L   + L ++   P + +     
Sbjct: 234 NVAMGRDLQRHFGQRPQFGLLLPILPGLDGVQKMSKSLGNTVGLRED---PLSMYSKLEK 290

Query: 264 IDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAA 323
           + DA V +             D   +       E +K +A +IT   HG   A++A   A
Sbjct: 291 VPDAVVDT-------YLTLLTDLDLRALPPNPRERQKAMALDITRQRHGASAADQAQRDA 343

Query: 324 MECF----DMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKI 379
                        +  +P  S++   V+       L+   G   S++EARR ++   +++
Sbjct: 344 ATLVGAAAGQHAAAAAVPEASLAA--VNFPARAFYLLSALGLCGSSSEARRQIQGGGVRL 401

Query: 380 NNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLCG 418
           +   + +                 +  GKK      L G
Sbjct: 402 DGVKLVDPNQTFASAADLEGK--VIQLGKKTFR--RLVG 436


>gi|284029848|ref|YP_003379779.1| tyrosyl-tRNA synthetase [Kribbella flavida DSM 17836]
 gi|283809141|gb|ADB30980.1| tyrosyl-tRNA synthetase [Kribbella flavida DSM 17836]
          Length = 400

 Score =  303 bits (777), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 91/400 (22%), Positives = 164/400 (41%), Gaps = 24/400 (6%)

Query: 21  ISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTS 79
           +    +L    + G  +    G D TA  LH GH   L ++  LQ  GH+ + L+G  T+
Sbjct: 18  VVGEADLRTRLASGRPLRIKYGVDCTAPELHLGHAVNLWMMRALQDLGHRVVFLLGDLTT 77

Query: 80  IIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYID 139
            IGDP+ R E+R  +  ++I+ N        S  ++  T      +  N  W  ++    
Sbjct: 78  RIGDPTGRSETRPALSPEQIELNAAAFLEQVSLVLR--TDPDVFEVRRNSEWYGAMDVAT 135

Query: 140 LLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGG 199
           LL       +  ++++ +  R+R+   + ++  E +Y +LQ YD   +  +    L + G
Sbjct: 136 LLGLFA-HVTQAQLMARDMFRARVAAGREIALHELSYPVLQGYDSFAMRSD----LTVVG 190

Query: 200 SDQWGNIICGIDLGERLKTPKLFALTSPLLTTAS-GTKMGKTLSGAIWLNKEMTSPYNFW 258
           SDQ  N   G    +RL       +TS +      G K  K+L+  I L     SP + +
Sbjct: 191 SDQLFNEQLGRHFQQRLGAEPQVVITSTITPGLDGGPKQSKSLNNYIALT---DSPRDKF 247

Query: 259 QYWRNIDDADVVSFAKRLTTLPMSEIDR---MAKLQGKEINEAKKIIATEITTMVHGREE 315
               ++ D  V ++A+  T LP+  +      A + G    +AK  +A  + T  HG   
Sbjct: 248 GKLMSLPDELVETYARVYTELPLGTVAALGSSAAVGGPAARDAKLKLAAAVVTRYHGAGA 307

Query: 316 AEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSN 375
           A+    A    F        MP + I    ++    L  L  +     S +E RR L+  
Sbjct: 308 AKAELEAFHRVFSDRAQPDDMPEVVIGPAPLTALELLEALRPR----DSRSELRRLLRQG 363

Query: 376 AIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           A+ +    +++ + +++       G   +  GK+      
Sbjct: 364 AVSVGGVKLTDAEARVEPA-----GGTVVRSGKRTWHRVR 398


>gi|325473316|gb|EGC76511.1| tyrosyl-tRNA synthetase [Treponema denticola F0402]
          Length = 293

 Score =  302 bits (774), Expect = 7e-80,   Method: Composition-based stats.
 Identities = 110/250 (44%), Positives = 150/250 (60%), Gaps = 4/250 (1%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           L IL ERGFI Q ++ + L     +G +  Y G D T  SLH GH+  +  L  L + GH
Sbjct: 5   LKILQERGFIQQCTDLKALSDRMDKGQIAFYTGTDPTGPSLHIGHMVPIFALKHLCREGH 64

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           K + L+GGGTS IGDPS + E R+M+   E+ +N   I+     F+       +   +NN
Sbjct: 65  KGVVLVGGGTSRIGDPSGKTEMRKMLSYDELDKNAVSIQNQIEKFL--AEDVENVRFVNN 122

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
           + WL  + YID LR+IGS FSVN+MLSFE+ + R+  E  LSFLEFNY +LQ+YDF+ L 
Sbjct: 123 KDWLADLNYIDFLRDIGSHFSVNKMLSFEAYKKRM--ETGLSFLEFNYQLLQSYDFLMLN 180

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
           +NY+  LQ+GG DQWGN++ G DL  R    ++FALT PL+T A G K GK   G+  L 
Sbjct: 181 QNYNVELQIGGDDQWGNMVAGSDLIRRKGGGEVFALTFPLVTRADGQKNGKERKGSSLLG 240

Query: 249 KEMTSPYNFW 258
            +      F+
Sbjct: 241 SDPCFSIRFF 250


>gi|149370495|ref|ZP_01890184.1| tyrosyl-tRNA synthetase [unidentified eubacterium SCB49]
 gi|149356046|gb|EDM44603.1| tyrosyl-tRNA synthetase [unidentified eubacterium SCB49]
          Length = 401

 Score =  302 bits (774), Expect = 8e-80,   Method: Composition-based stats.
 Identities = 104/415 (25%), Positives = 176/415 (42%), Gaps = 29/415 (6%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDIL-CSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
            K +   IL E G         +L+     Q  +   +G+D TA  LH GH   L  L  
Sbjct: 7   LKENVEIILPENGL------EEKLEQANKQQRKLIIKLGFDPTAPDLHLGHAVVLKKLKE 60

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD 122
            Q  GH+ I L+G  T+ IGDP+ +++SR+ +  +E+Q N        S  I     K  
Sbjct: 61  FQDLGHQVIILVGDFTARIGDPTGKNKSRKPLTIKEVQHNAATYIKQLSKIIDIDKVK-- 118

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
             ++ N  WL  + + ++++ + S  +V +++       R      ++  E  Y ILQ +
Sbjct: 119 --IVFNSEWLDKLSFTEVIQIL-SKVTVAQLMHRNDFNKRFTENTPIAMHELVYPILQGF 175

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTL 241
           D VE+  +    ++MGG+DQ  N   G  L E  K      +  PLL    G  KM K+L
Sbjct: 176 DSVEIKAD----IEMGGTDQLFNCTMGRKLQENFKMDPQIVMCMPLLKGLDGKEKMSKSL 231

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAK 299
           +  I L  +     + +    +I D+ +  F    T    +E   +    + G+   E K
Sbjct: 232 NNIIGLTDDAK---DMFGKTMSIPDSLIEEFLNLTTNFSANEKQSIKDRLVAGENPMEIK 288

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFD-MSIHSQHMPTISISKDEVSRG-MGLLTLIV 357
           KIIA  I T  H    A++A    +  F      ++    I I+   V    + ++ L V
Sbjct: 289 KIIAKNIITQYHNSALAQEAEDYFVNQFQNKKNDNKEFEPIKINTLPVENNKIKVIDLCV 348

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
                 S +  RR +++ A+KI+         ++ LQ       +K+  GK++  
Sbjct: 349 HLKNELSKSAIRRLIENGAVKIDLEKTKEINNELVLQ-----SGMKIKIGKRDFY 398


>gi|255660042|ref|ZP_05405451.1| tyrosyl-tRNA synthetase [Mycoplasma genitalium G37]
          Length = 334

 Score =  301 bits (771), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 126/349 (36%), Positives = 200/349 (57%), Gaps = 20/349 (5%)

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH P  ++G  T++IGDP+ R E R+++  +EI +N + IK     F+       D ++ 
Sbjct: 2   GHTPHIVLGSATALIGDPTGRIELRKILEEKEIVKNTKTIKKQIKQFL------GDVIIH 55

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
            N+ WL  + YI+++RE+G+FFSVN+MLS ++  +R   E+ L+ +E NYMILQAYDF  
Sbjct: 56  ENKVWLEKLNYIEVIRELGAFFSVNKMLSTDAFSAR--WEKGLTLMELNYMILQAYDFYY 113

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIW 246
           L KN++  LQ+GGSDQW NI+ G +L +R     +F LT+ LL  A+G KMGKT SGA+W
Sbjct: 114 LHKNHNVTLQIGGSDQWANILAGANLIKRKNNASVFGLTANLLVKANGEKMGKTSSGALW 173

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           L++  TS ++F+QYW N+DD  +      LT L    ID +  L+G +I + K+++A  I
Sbjct: 174 LDENKTSVFDFYQYWINLDDQSLKKTFLMLTMLDKKVIDELCNLKGPKIKQTKQMLAFLI 233

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
           T ++HG ++A++A   +   F         P + I    V     L+  +V+  F  S +
Sbjct: 234 TELIHGTKKAKEAQQRSELIFSNQ------PDLDIKL--VKTSTNLIDYLVETKFIKSKS 285

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           EARR +    + INN  + +    I+ ++        +  GKK+ +   
Sbjct: 286 EARRLISQKGLTINNKHVLDLNQIIEWKEELQ----IIRKGKKSFLTIK 330


>gi|288918516|ref|ZP_06412866.1| tyrosyl-tRNA synthetase [Frankia sp. EUN1f]
 gi|288350035|gb|EFC84262.1| tyrosyl-tRNA synthetase [Frankia sp. EUN1f]
          Length = 408

 Score =  299 bits (767), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 94/404 (23%), Positives = 167/404 (41%), Gaps = 25/404 (6%)

Query: 18  IHQISNP----RELD-ILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPIS 72
             + ++      EL   L S   +    G DLTA  LH GH   L +   LQ  GH+ + 
Sbjct: 17  FARTTDEILTLEELRTRLLSGRQLIMKYGVDLTAPHLHIGHAVNLWMYRALQDLGHRVVL 76

Query: 73  LMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL 132
           L+G  T+ IGDP+ + ++R ++  +EI+ N ++I+   +  ++      +  +  N  WL
Sbjct: 77  LLGDFTTQIGDPTGKSKTRPVLAREEIEANAKQIQEQATRVLRTDPELLE--IRPNSEWL 134

Query: 133 CSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYD 192
            ++   +LL  + S  +V+R+LS +  R R+   QS++  E  Y I+Q +D V L  +  
Sbjct: 135 NAMTPSELL-TVMSRVTVDRLLSRDMFRKRMSEGQSIAAHELVYPIIQGWDSVCLRAD-- 191

Query: 193 CRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTAS-GTKMGKTLSGAIWLNKEM 251
             L + GSDQ  N + G  L E+        +T+ +      G K  K+L   + +N   
Sbjct: 192 --LTIIGSDQLFNEMMGRSLQEKEGQAPQVVITTKITPGIDGGEKQSKSLGNYVAINH-- 247

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVH 311
            SP   +     + D  V  +    + LP   I  +   Q     EAK  +AT I T   
Sbjct: 248 -SPREKFGRLMRVPDQYVGQYLTVYSDLPEDAIRAVLSKQETAPIEAKYDMATAIVTRWD 306

Query: 312 GREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLI-VKAGFATSTNEARR 370
           G   A       +  F           + +     +  M +L L+    G   S  + RR
Sbjct: 307 GEAAAAAERDWFITTFSRRQVPADAEHVVLD----TASMKVLDLMRTLLGAGPSNGDLRR 362

Query: 371 HLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            ++   + + +  I +    + +     +  + +  GK+     
Sbjct: 363 LIQQGGVTVGDDRIDDTDAVVTV----GSEPVPVKLGKRRWFQV 402


>gi|328479052|gb|EGF48517.1| tyrosyl-tRNA synthetase [Lactobacillus rhamnosus MTCC 5462]
          Length = 325

 Score =  299 bits (767), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 106/305 (34%), Positives = 157/305 (51%), Gaps = 23/305 (7%)

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL 163
           EK+     +      G  D  +++N  WL  I  +D LR+ G  FSVN ML+ E V SRL
Sbjct: 11  EKLTAQMENLF----GTDDFRIVDNYDWLSKISMLDFLRDYGKLFSVNNMLNKEVVASRL 66

Query: 164 KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKL-- 221
             E  +S+ EF Y ILQ+ DF+ L K+ D +LQ+GG+DQWGNI  GIDL  RL+ P    
Sbjct: 67  --ETGISYTEFTYQILQSVDFLHLFKHEDVQLQIGGADQWGNITAGIDLIHRLEGPDARA 124

Query: 222 FALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPM 281
           + LT+PL+  A GTK GK+  GA+WL+ E TSPY F+Q+W N DDADV  F K  T L  
Sbjct: 125 YGLTNPLMLKADGTKFGKSAGGAVWLDPEKTSPYEFYQFWFNQDDADVEKFLKFFTFLSR 184

Query: 282 SEIDRMAKLQG--KEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS------ 333
            EI  + +      E   A++ +A  +T  VHG++  ++A + +   F   +        
Sbjct: 185 DEIAELVEATKTHPEKRAAQRELARAVTKFVHGQKAVDQAESISAALFSGDVADLSADDI 244

Query: 334 ----QHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKL 389
               +  PT+   +   +    L+          S  +AR  +++ AI IN +   +   
Sbjct: 245 KQGFKQFPTVEAPQTAENIVTWLVD---TTKIEPSRRQAREDIQNGAITINGTRQRDLDF 301

Query: 390 QIKLQ 394
           ++   
Sbjct: 302 EVDPS 306


>gi|37524221|ref|NP_927565.1| tyrosyl-tRNA synthetase [Photorhabdus luminescens subsp. laumondii
           TTO1]
 gi|81420551|sp|Q7N9W0|SYY2_PHOLL RecName: Full=Tyrosyl-tRNA synthetase 2; AltName:
           Full=Tyrosine--tRNA ligase 2; Short=TyrRS 2
 gi|36783644|emb|CAE12496.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
           TTO1]
          Length = 399

 Score =  297 bits (761), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 92/417 (22%), Positives = 174/417 (41%), Gaps = 32/417 (7%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILC-----SQGVVTAYIGYDLTASSLHAGHLTQLM 58
            K +   +LS    I  +  P  L             +T  +G+D TA  LH GH   L 
Sbjct: 1   MKENIDKLLSN---IAIMEPPLGLQDKLALARQENRKLTIKLGFDPTAPDLHLGHAVVLQ 57

Query: 59  LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT 118
            L   Q  GH+ + ++G  T+ IGDP+ R++ R  +  ++I +N +      +  I    
Sbjct: 58  KLKDFQDEGHRIVVIIGDFTAGIGDPTGRNKLRPPLTPEQINKNSQTYINQLAKVINI-- 115

Query: 119 GKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMI 178
              +  +  N  W  ++ + ++++ I S  ++ +++  +  ++R + +  +   E  Y I
Sbjct: 116 --ENIEIRKNSEWFNNMPFSNVIKLI-SKITLAQIMHRDDFKTRFESKAPVHLHEIIYPI 172

Query: 179 LQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKM 237
           LQ YD V +  +    +++GG+DQ  N + G  L E  +      +T PLL    G  KM
Sbjct: 173 LQGYDSVMIDAD----IELGGTDQLFNNLVGRTLQEAYEKKGQIVITMPLLEGLDGIEKM 228

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEI 295
            K+ +  I L        + +    +I D+ ++++    T +   +   +      G   
Sbjct: 229 SKSKNNYIGLTDNAN---DMYGKVMSIPDSVIINYLTLATDMEAEKQSAIVSQLELGLNP 285

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG--MGLL 353
            + KK IA  I    H    A++A     E F+  +  +           + +G  + LL
Sbjct: 286 MKIKKDIAYNIVKRYHDDISAKEA----TEHFERVVQKRTPEEADHDVLILPKGSYITLL 341

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNE--KLQIKLQDFD-STGNIKLSFG 407
            L   A  A S +E RR ++S A++++ S   +E   +++            K   G
Sbjct: 342 DLCSVALPAISRSELRRLIRSGAVRVDKSKEDDEIKNIEVIPGTLIWIGKRYKFRIG 398


>gi|253987623|ref|YP_003038979.1| tyrosyl-tRNA synthetase [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|253779073|emb|CAQ82233.1| tyrosyl-trna synthetase 2 [Photorhabdus asymbiotica]
          Length = 399

 Score =  296 bits (759), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 92/421 (21%), Positives = 177/421 (42%), Gaps = 34/421 (8%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILC-----SQGVVTAYIGYDLTASSLHAGHLTQLM 58
            K +   +LS    I  +  P  L             +T  +G+D TA  LH GH   L 
Sbjct: 1   MKENIDKLLSN---IAIMEPPSGLQDKLALARQENRKLTIKLGFDPTAPDLHLGHSVVLQ 57

Query: 59  LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT 118
            L   Q  GH+ + ++G  T+ IGDP+ R++ R  +  ++I +N +      +  I    
Sbjct: 58  KLKDFQDEGHRIVVIIGDFTAGIGDPTGRNKLRPPLTLEQINKNSQTYINQLAKVINI-- 115

Query: 119 GKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMI 178
              +  +  N  W  ++ + ++++ I S  ++ +++  +  ++R + +  +   E  Y I
Sbjct: 116 --ENIEIRKNSEWFSNMPFSNVIKLI-SKITLAQIMHRDDFKTRFESKSPVHLHEIIYPI 172

Query: 179 LQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKM 237
           LQ YD V +  +    +++GG+DQ  N + G  L E  +      +T PLL    G  KM
Sbjct: 173 LQGYDSVMIDAD----IELGGTDQLFNNLVGRTLQEAYEKKGQIVITMPLLEGLDGIEKM 228

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEI 295
            K+ +  I L        + +    +I D+ ++++    T +   +   +      G   
Sbjct: 229 SKSKNNYIGLTDNAN---DMYGKVMSIPDSVIINYLTLATDMEAEKQSAIVSQLELGLNP 285

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG--MGLL 353
            + KK IA  I    H    A++AA      F+  +  +           + +G  + LL
Sbjct: 286 MKVKKDIAYNIVKRYHDDISAKEAAE----HFERVVQKRTPEEADHDVLILPKGSYITLL 341

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            L   A    S +E RR ++S A++++ S   NE     +++ +    + +  GK+    
Sbjct: 342 DLCSVALPTISRSELRRLIRSGAVRVDKSKEDNE-----IKNIEVIPGMLIWIGKRYKFR 396

Query: 414 C 414
            
Sbjct: 397 I 397


>gi|325528756|gb|EGD05818.1| tyrosyl-tRNA synthetase [Burkholderia sp. TJI49]
          Length = 299

 Score =  296 bits (758), Expect = 5e-78,   Method: Composition-based stats.
 Identities = 69/321 (21%), Positives = 143/321 (44%), Gaps = 26/321 (8%)

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           + N +      +  +     +    +  N  W   +    +++ + S ++V R+L  E  
Sbjct: 1   EANAKTYFEQAALVLDREKTE----IRYNSEWSMPLGADGMIK-LASRYTVARILEREDF 55

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R +    +S  EF Y ++Q YD V L  +    L++GG+DQ  N++ G +L ++    
Sbjct: 56  TKRFQGGVPISIHEFLYPLMQGYDSVALNAD----LELGGTDQKFNLLVGRELQKQYGQE 111

Query: 220 KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT 278
           +   LT PLL    G  KM K+    + ++++   P + +    +I D  +  + + L+ 
Sbjct: 112 QQCILTMPLLEGLDGVEKMSKSKGNYVGISEK---PTDMFGKLMSISDTLMWRYFELLSF 168

Query: 279 LPMSEID--RMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM 336
             M EI   R     G+   + K ++A EI    H + +AE+A                +
Sbjct: 169 RSMDEIAGFRREAEGGRNPRDFKVLLAQEIVARFHSQADAERALEDF-NHRAKGGVPDDI 227

Query: 337 PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
           P+++++       + +  L+ +AG   ST+EA R+++   +KI+ + +S++ L+++  +F
Sbjct: 228 PSVTLA----GAPLAIGQLLKQAGLVPSTSEALRNIEQGGVKIDGATVSDKALKVEAGEF 283

Query: 397 DSTGNIKLSFGKKNHIICHLC 417
                  +  GK+      L 
Sbjct: 284 ------VVQVGKRRFARVTLT 298


>gi|149235983|ref|XP_001523869.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
           YB-4239]
 gi|146452245|gb|EDK46501.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
           YB-4239]
          Length = 417

 Score =  294 bits (754), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 115/434 (26%), Positives = 205/434 (47%), Gaps = 62/434 (14%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L  +G I  +++    D +  +  +  Y+G D TASSLH G+L   +       
Sbjct: 18  SNGVQTLMRKGLIEAVTS----DDVLKEKNLHVYVGCDPTASSLHVGNLFVFL----AAT 69

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSS----FIKYGT--- 118
             ++   L+GGGT ++GDPS +  +R ++    ++ N  KI          F K+     
Sbjct: 70  YFNQITVLVGGGTGLVGDPSGKTSARVLIDKDILRANEVKITEQLQKLYSNFEKFQDIHG 129

Query: 119 -GKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYM 177
             K    ++NN +WL  +  +D LR +G    VN ML+ +SV++R      + F EF Y 
Sbjct: 130 GNKPLIQIVNNYSWLKDVTLLDFLRNVGPKVRVNEMLARDSVKNR----DGVHFGEFAYQ 185

Query: 178 ILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK-LFALTSPLLTTASGTK 236
           +LQ+YDF+ L+ N     Q+GG+DQWGNI  G+D+ ++  +    + +T PLLTT SG K
Sbjct: 186 LLQSYDFLHLSTN-GVNAQLGGADQWGNITAGLDMIKKFGSKNNCYGVTVPLLTTPSGEK 244

Query: 237 MGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN 296
            GK+   A++L+K+MT+P+  +Q++ N  D  V  F   L  +   +I            
Sbjct: 245 FGKSAGNAVFLDKDMTAPFQLYQFFINTPDNIVQRFFTLL-NVAKEKIPESET------- 296

Query: 297 EAKKIIATEITTMVHGREEAEKAATA-----------AMECFDMSIH-----SQHMPTIS 340
           E++K++A  +T ++HG + A+    A           ++  FD +        + M +  
Sbjct: 297 ESQKLLAKYMTWIIHGEDVADACDAAYKLLNGFPANVSINDFDKAGILIRCNKEEMLSAI 356

Query: 341 ISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG 400
           I+++          ++          E  R + +  + +N   IS ++L +   +F   G
Sbjct: 357 IARNS--------DML--------RREVNRTIAAKGVTVNGERISKDELILPQHEFVVDG 400

Query: 401 NIKLSFGKKNHIIC 414
            + +  GK    + 
Sbjct: 401 KVIVRVGKSKFHVL 414


>gi|331241372|ref|XP_003333334.1| hypothetical protein PGTG_15118 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
 gi|309312324|gb|EFP88915.1| hypothetical protein PGTG_15118 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
          Length = 357

 Score =  294 bits (754), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 98/338 (28%), Positives = 161/338 (47%), Gaps = 46/338 (13%)

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           + NN  W+  +  ++ L  +G    V+ ML+ +SV+ RL+    +SF EF Y +LQAYDF
Sbjct: 20  IKNNLEWMKDLSLLEFLGSVGRVARVSAMLARDSVKQRLESGSGISFTEFTYQLLQAYDF 79

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK-----------------------L 221
            +L   Y C +Q+GGSDQ+GNI+ GI+L  +L++                          
Sbjct: 80  AQLRSRYRCTIQLGGSDQYGNIMSGIELMSKLQSSPASDPVAQTRSRESDPETTSNRNVA 139

Query: 222 FALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPM 281
           F LT PLLTT  G K GK+   A+WL+ ++TSP  F+Q + +I D++V+ + K LT +P 
Sbjct: 140 FGLTIPLLTTREGEKFGKSAGNAVWLDPKLTSPVEFYQTFISIPDSEVLKYLKMLTFVPT 199

Query: 282 SEIDRMAKLQGKEI---NEAKKIIATEITTMVHGREEAEKAATAAMECF----------- 327
            E+D+  +   K      E +K++A E+T +VHG +   +A       F           
Sbjct: 200 EELDQCLQSSTKNPDSKRELQKLLAREVTLLVHGEKGLRQAIQGTEFLFPTESKLESDSR 259

Query: 328 ------DMSIHSQHMPT-ISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKIN 380
                  +    ++ P  I +   EV  G  L  L V +    S  EARR +K+  ++ N
Sbjct: 260 DHWSKEKLDETFENSPNWIELKSFEV-IGRSLGDLSVTSKLFQSKGEARRAIKAGGVRFN 318

Query: 381 NSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI-ICHLC 417
           +  I++    +       +  + L  GK  +  +  + 
Sbjct: 319 HRQITDFDQLVSQHHLIDSAYLLLMRGKSGYYKVVKVV 356


>gi|196018135|ref|XP_002118742.1| hypothetical protein TRIADDRAFT_62757 [Trichoplax adhaerens]
 gi|190578316|gb|EDV18769.1| hypothetical protein TRIADDRAFT_62757 [Trichoplax adhaerens]
          Length = 241

 Score =  293 bits (750), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 111/241 (46%), Positives = 155/241 (64%), Gaps = 1/241 (0%)

Query: 177 MILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTK 236
           M+LQA+DF  L     C LQMGGSDQWGNI+ G++L  +    + F LTSPLLTT+SG K
Sbjct: 1   MLLQAFDFYHLYNKEQCVLQMGGSDQWGNIVNGVELIRKKLGKEAFGLTSPLLTTSSGAK 60

Query: 237 MGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN 296
           MGKT SGA+WLN++  SPY +WQ+WRN +DADV+ F K  T LP+  I+ ++KL GKEIN
Sbjct: 61  MGKTASGAVWLNEDTLSPYEYWQFWRNTEDADVIKFLKLFTELPLKYINELSKLSGKEIN 120

Query: 297 EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLI 356
            AK I+A E T + HG E A  A + + + F+ +    ++P   +S  E+  GM L  L+
Sbjct: 121 GAKIILADEATKLCHGIEAANSAKSTSKQTFEDNNIDNNLPKYEVSSIEIKNGMMLFKLL 180

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           V    A S + AR+ ++ N I+INN+++S+    I   DFD   N+KLS GKK H++  +
Sbjct: 181 VSCNLAASNSAARKLIQGNGIRINNNVVSDINYIIHQDDFD-DKNLKLSVGKKKHMLVKV 239

Query: 417 C 417
            
Sbjct: 240 T 240


>gi|331697989|ref|YP_004334228.1| tyrosyl-tRNA synthetase [Pseudonocardia dioxanivorans CB1190]
 gi|326952678|gb|AEA26375.1| tyrosyl-tRNA synthetase [Pseudonocardia dioxanivorans CB1190]
          Length = 464

 Score =  292 bits (749), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 94/397 (23%), Positives = 164/397 (41%), Gaps = 39/397 (9%)

Query: 34  GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRM 93
               A  G D T + +H GH   + +L   Q+ GH  + ++G  T+ IGDPS R + R  
Sbjct: 79  RPFVAKFGIDPTGAEVHLGHSVPMQILSRFQRMGHDVVFIVGDMTAKIGDPSGRSDDRPA 138

Query: 94  MRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRM 153
           +  ++I+ N+   +   S F  +      A    N  WL  I   +++  I +   V+  
Sbjct: 139 LTDEDIEHNLATYREQVSPFFDFD----RAHFRRNGDWLRKITLPEIIG-ITAQIPVSMS 193

Query: 154 LSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLG 213
           L  E  R RL   Q LS  E  Y I+ A D VE+     C L++GG DQ+ N+     + 
Sbjct: 194 LQREDFRKRLDAGQGLSLAELMYSIVMALDSVEIN----CDLEVGGIDQFLNMQMCRKVM 249

Query: 214 ERLKTPKLFALTSPLLTTASGT--KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVS 271
           E         + + L+    GT  KM K+    + L     +P   +    ++ D  V  
Sbjct: 250 EISGQVPELVVATSLIEGTDGTGAKMSKSKGNYVPLTA---APGEIFGKIMSVPDRLVEP 306

Query: 272 FAKRLTTLPMSEIDRMAKLQGK---EINEAKKIIATEITTMVHGREEAEKAATAAMECFD 328
           + + L+    +E+   A+          + KK++A E+T  +HG + A KA       F 
Sbjct: 307 YFRALSEWLDAELAVAAERVAAGTLHPMDLKKVLAGEVTAAIHGVDAAMKARDEFAARFS 366

Query: 329 MSIHSQ--HMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKI----NNS 382
               ++   +PT++        G+ +   +   GFA S  + RR  + N +++    +  
Sbjct: 367 RRTFAEVDDLPTVA------DLGVSVTEAVKALGFAASNGDVRRVAQQNGLRLVVEADGE 420

Query: 383 I----ISNEKLQIKLQDFDST------GNIKLSFGKK 409
                ++ +  +  L D          G+  L  G+K
Sbjct: 421 QEQLSLTADDARAVLADLVKDRLDGKTGDYFLKVGRK 457


>gi|187734653|ref|YP_001876765.1| tyrosyl-tRNA synthetase [Akkermansia muciniphila ATCC BAA-835]
 gi|187424705|gb|ACD03984.1| tyrosyl-tRNA synthetase [Akkermansia muciniphila ATCC BAA-835]
          Length = 393

 Score =  292 bits (749), Expect = 6e-77,   Method: Composition-based stats.
 Identities = 97/412 (23%), Positives = 179/412 (43%), Gaps = 35/412 (8%)

Query: 9   LSILSERGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           L IL   G    + +  EL      G  +   +G D TA  +H GH   +  L   Q+ G
Sbjct: 7   LDILM--GGTAVVISREELKERLKLGRPLRVKLGVDPTAPDIHLGHTVAIEKLRQFQELG 64

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           H+ + L+G  T+ IGDPS R  +R  +  +++ EN E         +     +    ++ 
Sbjct: 65  HQAVLLIGDFTATIGDPSGRSVTRPPLSREQVLENAETYTKQAFKILDRDKTE----IVY 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  W   + Y ++L+ + S  ++ +ML+ E  ++R++  + +   E  Y I+Q +D VE+
Sbjct: 121 NGDWFRKMTYEEVLK-LNSRVTMQQMLAREDFKARVEGGKEVRLHEMQYPIMQGWDSVEI 179

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIW 246
             +    +++GG+DQ  NI+ G DL +        A+T PLL    G  KM K+    + 
Sbjct: 180 RAD----VELGGTDQLFNILVGRDLQKEEGMLPQIAMTMPLLEGLDGVRKMSKSYGNYVG 235

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           +++   SP   +    +  D  +  +   L    + E   M    G    EAKK++A +I
Sbjct: 236 VDE---SPEMMFGKMMSASDELMDRYYLVL----LGEKRDM----GLHPMEAKKLLAWKI 284

Query: 307 TTMVHGREEAEKAATAAMECFDMS-IHSQHMPTISISKDEVS-RGMGLLTLIVKAGFA-- 362
           T   H    A+ A +     F    + +  +P + I+        + L++ + +  F   
Sbjct: 285 TARYHDSAAADAARSDWETRFSKRDLAAADLPEVEIASLPADMNALALVSFLFENVFQVK 344

Query: 363 TSTNEAR-RHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            S    R  H    AI++N+  +++    ++         ++LS   K H +
Sbjct: 345 KSNGVLRKEHFTPGAIQLNDVKMTDPSAVLE---LAPGSILRLS---KKHAV 390


>gi|33240859|ref|NP_875801.1| tyrosyl-tRNA synthetase [Prochlorococcus marinus subsp. marinus
           str. CCMP1375]
 gi|81664162|sp|Q7VAP7|SYY_PROMA RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|33238388|gb|AAQ00454.1| Tyrosyl-tRNA synthetase [Prochlorococcus marinus subsp. marinus
           str. CCMP1375]
          Length = 416

 Score =  292 bits (747), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 88/386 (22%), Positives = 162/386 (41%), Gaps = 29/386 (7%)

Query: 35  VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMM 94
            +   +G D T S +H GH      L   Q  GH  I ++G  T+ IGDP+ + ++R  +
Sbjct: 46  PLRVKLGIDPTGSEIHLGHSIIFRKLRAFQDAGHTAILIIGDFTARIGDPTGKSKTRVQL 105

Query: 95  RSQEIQENIEKIKGIFSS-------FIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSF 147
             +E+++N E                + + T +    +  N  WL     + ++ ++ S 
Sbjct: 106 SPEEVEKNSENYLNQLGKGQSKETSLLDFET-EGRLEVRRNSEWLEGFDMVQII-DLLSK 163

Query: 148 FSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNII 207
            +V +ML+ E   +R     S++  EF Y + Q YD V +  +    +++GG DQ  N+ 
Sbjct: 164 STVGQMLAKEEFANRYTSGTSIALHEFLYPLFQGYDSVAVQAD----VELGGVDQKFNVA 219

Query: 208 CGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDD 266
            G D+         F L  P+L    G  KM K+L   + L ++     + +     + D
Sbjct: 220 MGRDMQRHFSQKPQFGLLLPILVGLDGVQKMSKSLGNTVGLAEDAL---SMYSKLEKVPD 276

Query: 267 ADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAAT-AAME 325
           + V ++   LT   + ++            E +K +A  +T   HG   A+ A   A+  
Sbjct: 277 SQVNNYLTLLTDCEIRDLTL-------NARELQKFMALNVTAQFHGLSVAKIAQKDASKI 329

Query: 326 CFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIIS 385
              +    + +P +S+S   V+       L+   G  +S++ ARR ++  A++I+   I 
Sbjct: 330 VSGLKETVEDVPVLSVSN--VNFPTKAFHLLSSIGLCSSSSNARRQIQGGALRIDGKKIL 387

Query: 386 NEKLQIKLQDFDSTGNIKLSFGKKNH 411
           +   +   Q         L  GKK  
Sbjct: 388 DPNFEFVDQKDIVGK--ILQLGKKTF 411


>gi|21064341|gb|AAM29400.1| RE07958p [Drosophila melanogaster]
          Length = 339

 Score =  291 bits (746), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 99/272 (36%), Positives = 151/272 (55%), Gaps = 16/272 (5%)

Query: 5   KSDFLSILSERGFIHQISNPRE---LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
           + + L  L++RGF H I        +  L ++G  + Y G+D TA SLH G+L  +M L 
Sbjct: 25  QKNLLE-LTDRGFFHGIFPDTAAPRMKQLFTRGQQSIYAGFDPTADSLHVGNLLVIMGLI 83

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFI------- 114
             Q+ GH+PI+L+GG T +IGDPS R   R  +    I+ N++ I+              
Sbjct: 84  HCQRAGHRPIALVGGATGLIGDPSGRKTERNQLGETVIETNLKAIEQQLRRVFENHENCL 143

Query: 115 ----KYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLS 170
               K        +++NN  W   ++ ID +  +G  F +  MLS  SV+SRL+ E  +S
Sbjct: 144 WDSKKQKLPLAPLIIVNNADWYADLQLIDFVANMGRHFRMGSMLSRSSVQSRLESEDGMS 203

Query: 171 FLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLL 229
           F EF Y I QAYD++ L + ++C  QMGGSDQ GN++ G +L  R++   ++F LT PL+
Sbjct: 204 FTEFTYQIFQAYDWLHLLRRHNCCFQMGGSDQTGNLMTGHELISRVERKREVFGLTLPLV 263

Query: 230 TTASGTKMGKTLSGAIWLNKEMTSPYNFWQYW 261
           TT  G K GK+   A+WL+   TSP+  +Q++
Sbjct: 264 TTEEGDKFGKSAGNAVWLDGNKTSPFALYQFF 295


>gi|25145802|ref|NP_741382.1| tYrosinyl tRNA Synthetase family member (yrs-1) [Caenorhabditis
           elegans]
 gi|15789312|gb|AAB09162.2| C. elegans YARS-1 protein, isoform a, confirmed by transcript
           evidence [Caenorhabditis elegans]
          Length = 447

 Score =  290 bits (744), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 114/434 (26%), Positives = 197/434 (45%), Gaps = 34/434 (7%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQG----VVTAYIGYDLTASSLHAGHLTQLMLLFW 62
           D+++ L+ R  + Q S P +L   CS+         Y G+D TA SLH G+L  L+ L  
Sbjct: 25  DYITDLNARKQL-QHSYPTDLLSKCSEDLRQLPPYVYAGFDPTAESLHIGNLLILVNLIR 83

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD 122
            Q+ G +PI+L+G  T+ IGDPS +   R ++    I  N  K+        +   G ++
Sbjct: 84  AQQFGIRPIALIGEFTASIGDPSGKKSERGLLAGDVIMHNSRKVTDQICKIFENAPGSSE 143

Query: 123 -ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA 181
             +++NN  WL  I   D LRE      V +ML   ++++RL  E  LS+ EF+Y  +QA
Sbjct: 144 KPIIVNNNDWLGKISLRDFLREC-KNMQVGKMLRMNTIKNRL--EVGLSYTEFSYQTMQA 200

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLG-ERLKTPKLFALTSPLLTTASGTKMGKT 240
           +D+  L++ Y CR Q+GG DQ G++  G     + +       +  P+LT ++G K+GK+
Sbjct: 201 FDWYTLSEKYGCRFQLGGYDQLGHLDFGAHYIKKMMNQAFAAGVCFPILTDSTGAKLGKS 260

Query: 241 L-SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE-- 297
              GA+WL+   TSP++F+Q++  + D          +   +  I  + K     + +  
Sbjct: 261 EGGGALWLDATKTSPFHFYQFFAQLHDDKAEELLLLFSLQDIEHIRDVLKNHRSNLGQWI 320

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMP-------------TISISKD 344
           A++ +A EIT +VHG+E  E A       F        +              TI + K+
Sbjct: 321 AQRELAAEITRIVHGKEGLEVAMRCTKAMF--GAKKADLSGLSRSEVLQLFRTTIDLKKE 378

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
            V+    L      +   +        ++  A  +N     +    I     ++  ++ L
Sbjct: 379 NVATMGQLAD---ASRLGSGKGHL--LMQQGAFSVNGEKKRSPSESIADVFLENASDLTL 433

Query: 405 SF-GKKNHIICHLC 417
              GK+ + +    
Sbjct: 434 VCWGKRGYQLVRWV 447


>gi|302546453|ref|ZP_07298795.1| tyrosine-tRNA ligase [Streptomyces hygroscopicus ATCC 53653]
 gi|302464071|gb|EFL27164.1| tyrosine-tRNA ligase [Streptomyces himastatinicus ATCC 53653]
          Length = 472

 Score =  290 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 92/377 (24%), Positives = 157/377 (41%), Gaps = 25/377 (6%)

Query: 18  IHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGG 77
           I +++   E      QG +   +G D TA+ +H GH   +++L   Q+ GH    L+G  
Sbjct: 63  IKELAERIEERRAAGQG-LAIKLGIDPTAADVHLGHTVPMIVLNRFQRMGHDVTLLIGDF 121

Query: 78  TSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKY 137
           T+ IGDPS R   R  +   +I  N+   +     F  +           N  WL    +
Sbjct: 122 TAKIGDPSGRTAERPPLTDDDIARNLAGYQQQVRPFFDF----EKVSFRQNSEWLSPYTF 177

Query: 138 IDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQM 197
            +LL  +     V+++L  E  R+RL     L+  E  Y I Q  D V L  +    +++
Sbjct: 178 PELLGLLA-QVPVSQLLQREDFRNRLAAGSGLTMSELLYPIAQGLDSVALESD----VEL 232

Query: 198 GGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT--KMGKTLSGAIWLNKEMTSPY 255
           GG+DQ  N+  G  L E         +T PL+    GT  KM K+    + L+       
Sbjct: 233 GGADQLLNLQMGRKLMELRGQQPQLVVTMPLIEGTDGTGAKMSKSKGNYVALSAPAD--- 289

Query: 256 NFWQYWRNIDDADVVSFAKRLTTLPMSEI-DRMAKLQGK--EINEAKKIIATEITTMVHG 312
           + +    +I D  +  + +  T    +EI     +L+ K     + KK++A E+   ++G
Sbjct: 290 DVFGKIMSIPDRLMKPYLEAWTEWTDAEIAAATTRLETKSLHPMDLKKVLAGEVVAALYG 349

Query: 313 REEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVK-AGFATSTNEARRH 371
            E A KA    +  F     +  + T+ +       G  + T++ K   F  S + ARR 
Sbjct: 350 VEAAMKARAGFIAQFSKKSFT-DVGTLPVVDAAEHGGETIATVLSKVLEFQPSASAARRV 408

Query: 372 LKSNAIKI-----NNSI 383
            K N +++     +   
Sbjct: 409 AKQNGLRLVVEAEDGQK 425


>gi|224095535|ref|XP_002197393.1| PREDICTED: similar to tyrosyl-tRNA synthetase 2, mitochondrial
           [Taeniopygia guttata]
          Length = 442

 Score =  290 bits (742), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 103/345 (29%), Positives = 168/345 (48%), Gaps = 16/345 (4%)

Query: 87  RDESRRMMRSQEIQENIEKIKGIFSS--FIKYGTGK-TDALMLNNETWLCSIKYIDLLRE 143
           RD++      Q      + I        F + G G+   A +L+N  WL     +  L  
Sbjct: 94  RDKTSPFELYQFFVRQQDNIVEKLKRKLFWEPGAGRLGRATLLDNARWLGREPLLRFLGG 153

Query: 144 IGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQW 203
            G    +  +LS +S ++RL   + +S  EF Y  LQAYDF+ L +++ CR+Q+GG DQ 
Sbjct: 154 AGGRLRMGTLLSRQSCQARLHSAEGMSLAEFLYPALQAYDFLHLHRHHGCRIQLGGHDQM 213

Query: 204 GNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
           GNI+ G +L  ++    +F +T PL+T+ SG K+GKT   A+WLN++ TSP+  +Q++  
Sbjct: 214 GNIMSGYELVTKMTGADVFGITVPLITSTSGDKLGKTAGNAVWLNRDKTSPFELYQFFVR 273

Query: 264 IDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATEITTMVHGREEAEKAAT 321
             D  V  + K  T LP++EI  + ++  KE  +   +K +A E+T +VHGRE  E A  
Sbjct: 274 QQDNIVEKYLKLFTFLPLAEIAHIMEMHAKEPEKWGPQKRLAAEVTKLVHGREGLESAKR 333

Query: 322 AAMECFDMSIHS-QHMPTISI---------SKDEVSRGMGLLTLIVKAGFATSTNEARRH 371
                +  S+ + + M    +         ++  +  GM +L L  KA          R 
Sbjct: 334 CTKALYYSSVEALEEMSDQELQELFRQATSAELMLEPGMTVLDLCRKANAIPDGPSGYRK 393

Query: 372 LKSNAIKINNSIISNEKLQIKL-QDFDSTGNIKLSFGKKNHIICH 415
           +    + IN + ++N +  + L Q     G   L  GKKN+ I  
Sbjct: 394 ITDGGVSINGNRVTNPETVLILGQHILKNGVSLLRVGKKNYYIIK 438



 Score = 72.9 bits (178), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 22/61 (36%), Positives = 37/61 (60%)

Query: 216 LKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKR 275
           +    +F +T PL+T+ SG K+GKT   A+WLN++ TSP+  +Q++    D  V    ++
Sbjct: 61  MTGADVFGITVPLITSTSGDKLGKTAGNAVWLNRDKTSPFELYQFFVRQQDNIVEKLKRK 120

Query: 276 L 276
           L
Sbjct: 121 L 121


>gi|256423053|ref|YP_003123706.1| tyrosyl-tRNA synthetase [Chitinophaga pinensis DSM 2588]
 gi|256037961|gb|ACU61505.1| tyrosyl-tRNA synthetase [Chitinophaga pinensis DSM 2588]
          Length = 433

 Score =  290 bits (742), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 101/408 (24%), Positives = 168/408 (41%), Gaps = 28/408 (6%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           IL E G   +I    +         +   +G+D TA  LH GH   L  L   Q  GH+ 
Sbjct: 45  ILPENGLTEKIRQAEK-----DNRNLIIKLGFDPTAPDLHLGHAVVLKQLRAFQDLGHQV 99

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           + ++G  T+ IGDP+ +++SR+ +  +E+  N +      +  I          +L N T
Sbjct: 100 VIIVGSFTAQIGDPTGKNKSRKPLSKEEVLANADTYIRQLAKIID----TNKCQILFNGT 155

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           WL  + + ++L+ + S  +V ++L       R      ++  E  Y ILQ +D V++  +
Sbjct: 156 WLDKLSFPEILQLL-SKVTVAQLLHRNDFNKRFTENVPIAMHELMYPILQGFDSVQINAD 214

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNK 249
               ++MGG+DQ  N   G  L E    P    +  PLL    G  KM K+L+  I L  
Sbjct: 215 ----IEMGGTDQLFNCTMGRQLQEAHGLPPQVVMCMPLLRGLDGKEKMSKSLNNIIGLT- 269

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIATEIT 307
              +P   +    +I D  +  F    T     +   + +L   G+     KKIIA  I 
Sbjct: 270 --DTPNEMFGKTMSIPDHLIDEFIDLTTDFSPEKKHALKQLMVSGENPMNIKKIIAANII 327

Query: 308 TMVHGREEAEKAATAAMECFD-MSIHSQHMPTISISKD--EVSRGMGLLTLIVKAGFATS 364
           T  H    A  A    +  F   S   +    I+I+      +    LL L  +     +
Sbjct: 328 TQYHDTNSAASAEAFFINQFQNKSFEEKTFEQIAINSFTEGTATTTTLLDLCQQLKTDET 387

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
            +  RR + + AI ++N  + +   QI          IK+  G++  I
Sbjct: 388 RSGIRRLIINGAITLDNEKLLDPNQQI---HLRPG--IKIKIGRRLFI 430


>gi|307330737|ref|ZP_07609874.1| tyrosyl-tRNA synthetase [Streptomyces violaceusniger Tu 4113]
 gi|306883629|gb|EFN14678.1| tyrosyl-tRNA synthetase [Streptomyces violaceusniger Tu 4113]
          Length = 472

 Score =  289 bits (739), Expect = 8e-76,   Method: Composition-based stats.
 Identities = 89/365 (24%), Positives = 152/365 (41%), Gaps = 24/365 (6%)

Query: 26  ELDILCSQGV-----VTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSI 80
           EL     +       +   +G D TA+ +H GH+  +++L   Q+ GH    L+G  T+ 
Sbjct: 65  ELAKRIEERRGAGQGLGIKLGIDPTAADVHLGHVVPMIILSRFQRMGHDVTLLIGDFTAK 124

Query: 81  IGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDL 140
           IGDPS R   R  +  ++I  N+   +     F  +           N  WL    + +L
Sbjct: 125 IGDPSGRTAERPPLTDEDIARNLAGYQDQVRPFFDF----EKVSFRQNSEWLAPYTFPEL 180

Query: 141 LREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGS 200
           L  + S   V+++L  E  R+RL     L+  E  Y I QA D V L    +C +++GG+
Sbjct: 181 LGLL-SQVPVSQLLQREDFRNRLAAGSGLTMSELLYPIAQALDSVAL----ECDVELGGA 235

Query: 201 DQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT--KMGKTLSGAIWLNKEMTSPYNFW 258
           DQ  N+  G  L E         +T PL+    GT  KM K+    + L+       + +
Sbjct: 236 DQLLNLQMGRKLMELRGQRPQLVVTMPLIEGTDGTGAKMSKSKGNYVALSATAD---DVF 292

Query: 259 QYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAKKIIATEITTMVHGREE 315
               +I D  +  + +  T    +EI               + KK++A E+   ++G E+
Sbjct: 293 GKIMSIPDRLMKPYLEAWTEWTDAEIAAATARVEDRSLHPMDLKKVLAGEVVAALYGIEK 352

Query: 316 AEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVK-AGFATSTNEARRHLKS 374
           A  A    +  F     +  + T+ +          + T++ K   F  S + ARR  K 
Sbjct: 353 AMAARAGFVAQFSKKSFT-DVETLPVVDAGEHGAESIATVLSKVLEFQPSASAARRVAKQ 411

Query: 375 NAIKI 379
           N +++
Sbjct: 412 NGLRL 416


>gi|47097761|ref|ZP_00235250.1| tyrosyl-tRNA synthetase [Listeria monocytogenes str. 1/2a F6854]
 gi|47013864|gb|EAL04908.1| tyrosyl-tRNA synthetase [Listeria monocytogenes str. 1/2a F6854]
          Length = 226

 Score =  287 bits (736), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 93/227 (40%), Positives = 129/227 (56%), Gaps = 5/227 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG I+Q ++   L     +  ++ Y G D +  S+H GHL   M+L   Q  
Sbjct: 2   NIIDELEWRGAIYQQTDEEGLRKWVDEKQISLYCGIDPSGDSMHIGHLIPFMILRRFQNA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI L+GG T  IGDPS + E R++   ++I +N+E ++        +  G + A M+
Sbjct: 62  GHRPIILVGGATGTIGDPSGKKEERQLQSMEQISKNVESLRVQLGKIFDF-EGDSAASMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W   +  +D LR+ G  F+VN MLS + V SRL  E  +SF EF Y ILQA DF  
Sbjct: 121 NNYDWTKDVSILDFLRDYGKEFNVNTMLSKDIVASRL--EVGISFTEFAYQILQAMDFNH 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTT 231
           L +  DCRLQ+GGSDQWGNI  G+DL  + +    K F LT PLLT 
Sbjct: 179 LYEFNDCRLQIGGSDQWGNITAGLDLIRKKQGENAKAFGLTIPLLTK 225


>gi|148664997|gb|EDK97413.1| tyrosyl-tRNA synthetase 2 (mitochondrial), isoform CRA_b [Mus
           musculus]
          Length = 355

 Score =  286 bits (733), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 96/275 (34%), Positives = 143/275 (52%), Gaps = 16/275 (5%)

Query: 13  SERGFIHQISNP----RELDILCS-----QGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
             RG   +         EL  L           T Y G+D T  SLH GHL  L+ LF  
Sbjct: 43  RARGLFKEFFPESGTKTELPELFDRRRAGSSPQTVYCGFDPTGDSLHVGHLLTLLGLFHF 102

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI-------EKIKGIFSSFIKY 116
           Q+ GH  I+L+GG T+++GDPS R + R  + ++ ++ N        E +    +     
Sbjct: 103 QRAGHNVIALVGGSTALLGDPSGRTKGREALSAECVRANAHALRRGLEALAANHARLFAD 162

Query: 117 GTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNY 176
           G       +L+N  W      +D L  +G  F +  +LS  SV+SRLK  + +S  EF Y
Sbjct: 163 GRPWGSFTVLDNAAWFQEQHLVDFLATVGGHFRMGTLLSRLSVQSRLKSPEGMSLAEFFY 222

Query: 177 MILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTK 236
            +LQAYDF  L ++Y CR+Q+GGSDQ GNI+ G +   +L    +F +T PL+T+ +G K
Sbjct: 223 QVLQAYDFYYLFQHYGCRVQLGGSDQLGNIMSGYEFIHKLTGEDVFGITVPLITSTTGAK 282

Query: 237 MGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVS 271
           +GK+   A+WLN+E TSP+  +Q++    D  V  
Sbjct: 283 LGKSAGNAVWLNREKTSPFELYQFFVRQQDDSVER 317


>gi|74210706|dbj|BAE23688.1| unnamed protein product [Mus musculus]
          Length = 349

 Score =  286 bits (733), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 96/275 (34%), Positives = 143/275 (52%), Gaps = 16/275 (5%)

Query: 13  SERGFIHQISNP----RELDILCS-----QGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
             RG   +         EL  L           T Y G+D T  SLH GHL  L+ LF  
Sbjct: 37  RARGLFKEFFPESGTKTELPELFDRRRAGSSPQTVYCGFDPTGDSLHVGHLLTLLGLFHF 96

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI-------EKIKGIFSSFIKY 116
           Q+ GH  I+L+GG T+++GDPS R + R  + ++ ++ N        E +    +     
Sbjct: 97  QRAGHNVIALVGGSTALLGDPSGRTKGREALSAECVRANAHALRRGLEALAANHARLFAD 156

Query: 117 GTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNY 176
           G       +L+N  W      +D L  +G  F +  +LS  SV+SRLK  + +S  EF Y
Sbjct: 157 GRPWGSFTVLDNAAWFQEQHLVDFLATVGGHFRMGTLLSRLSVQSRLKSPEGMSLAEFFY 216

Query: 177 MILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTK 236
            +LQAYDF  L ++Y CR+Q+GGSDQ GNI+ G +   +L    +F +T PL+T+ +G K
Sbjct: 217 QVLQAYDFYYLFQHYGCRVQLGGSDQLGNIMSGYEFIHKLTGEDVFGITVPLITSTTGAK 276

Query: 237 MGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVS 271
           +GK+   A+WLN+E TSP+  +Q++    D  V  
Sbjct: 277 LGKSAGNAVWLNREKTSPFELYQFFVRQQDDSVER 311


>gi|254448516|ref|ZP_05061976.1| tyrosyl-tRNA synthetase [gamma proteobacterium HTCC5015]
 gi|198261899|gb|EDY86184.1| tyrosyl-tRNA synthetase [gamma proteobacterium HTCC5015]
          Length = 273

 Score =  286 bits (732), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 71/286 (24%), Positives = 126/286 (44%), Gaps = 19/286 (6%)

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +  +    ++R + +  +V RML  +  + R    QS++  EF Y ++Q +D V L  + 
Sbjct: 1   MNELGTEGMIR-LAAKQTVARMLERDDFKKRYTSGQSIAIHEFLYPLVQGWDSVALKAD- 58

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKE 250
              +++GG+DQ  N++ G +L           +T PLL    G  KM K+L   I +++ 
Sbjct: 59  ---IELGGTDQKFNLLMGRELQREEGESPQVVITMPLLEGLDGVQKMSKSLGNYIGIDE- 114

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEITT 308
             SP + +    +I D  +  + + L+  P+ E+   R    +G    + K  +A E+  
Sbjct: 115 --SPDDIFGKVMSISDELMWRYFELLSFRPLDEVVQLRADVEKGANPRDIKFQLAEELIA 172

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
             H +E AE+A    +  F      Q M  + I    V  G+GL  L+  A    ST++A
Sbjct: 173 RFHSQEAAEQAREQFVARFQKGAMPQEMDELEIP---VGEGLGLPALLKAAKLCPSTSDA 229

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            R +K  A+KI+   ++N+          S        GK+     
Sbjct: 230 MRMIKQGAVKIDGEKVANKGYV-----CVSGVTAVYQVGKRRFARV 270


>gi|225012587|ref|ZP_03703022.1| Tyrosine--tRNA ligase [Flavobacteria bacterium MS024-2A]
 gi|225003120|gb|EEG41095.1| Tyrosine--tRNA ligase [Flavobacteria bacterium MS024-2A]
          Length = 266

 Score =  286 bits (732), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 97/266 (36%), Positives = 150/266 (56%), Gaps = 18/266 (6%)

Query: 169 LSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPL 228
           +SF EF Y +LQ YDF+ L K  DCRLQMGGSDQWGNI  G +L  R +  K +A+T PL
Sbjct: 1   MSFTEFTYQLLQGYDFLHLFKTLDCRLQMGGSDQWGNITTGTELIRRKEGGKAYAITCPL 60

Query: 229 LTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMA 288
           +  A G+K GKT  G IWL+K+ TSPY F+Q+W N  D D +++ K  T L   EI+ ++
Sbjct: 61  IKKADGSKFGKTEGGNIWLDKKRTSPYKFYQFWLNTSDEDALNYIKIFTFLSQDEINSIS 120

Query: 289 KLQGKEINE--AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS------------- 333
           K   +  ++   +  IA E+TT+VHG EE +KA  A+   F  +                
Sbjct: 121 KEHAEAPHQRLLQNTIANEVTTLVHGLEELQKAQEASQILFGRATSEAFQKLTPETFLEL 180

Query: 334 -QHMPTISISKDEVSRGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
            + +P  +I++  ++ G+ ++  +   +GF +S ++ARR LK NAI +N + + ++   I
Sbjct: 181 FEGVPQANINRKTINEGLDIIAALSSMSGFLSSNSDARRALKENAISVNKTKV-DQDFMI 239

Query: 392 KLQDFDSTGNIKLSFGKKNHIICHLC 417
           +         + L  GKKN+ +  + 
Sbjct: 240 QQSHLIGGQYVLLQRGKKNYFVLKIV 265


>gi|323245784|gb|EGA29775.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2009159199]
          Length = 205

 Score =  285 bits (730), Expect = 9e-75,   Method: Composition-based stats.
 Identities = 87/202 (43%), Positives = 128/202 (63%), Gaps = 1/202 (0%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q+
Sbjct: 4   SNLIKQLQERGLVAQVTDEDALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQ 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GHKP++L+GG T +IGDPSF+   R++   + +QE + KI+   + F+ +  G+  A+ 
Sbjct: 64  AGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVAKIRKQVAPFLDFDCGENSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDF 184
            NN  W  S+  +  LR+IG  FSVN+M++ E+V+ RL R +Q +SF EF+Y +LQ YDF
Sbjct: 124 ANNYDWFGSMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDQGISFTEFSYNLLQGYDF 183

Query: 185 VELAKNYDCRLQMGGSDQWGNI 206
             L K +   LQ+GGSDQWGNI
Sbjct: 184 ACLNKLHGVALQIGGSDQWGNI 205


>gi|156098520|ref|XP_001615292.1| tyrosine-tRNA ligase [Plasmodium vivax SaI-1]
 gi|148804166|gb|EDL45565.1| tyrosine-tRNA ligase, putative [Plasmodium vivax]
          Length = 511

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 128/466 (27%), Positives = 213/466 (45%), Gaps = 56/466 (12%)

Query: 3   AFKSDFLSILSERGFIHQISNPRELDILC--------SQGVVTAYIGYDLTASSLHAGHL 54
             KS  L  L ER  IH +S+ + +D +          +     Y+G D+    LH G+L
Sbjct: 45  EIKSKALKKLFERKIIHYVSDVKAVDAMLHSNETEPKREKRKAVYLGIDVNCKYLHLGNL 104

Query: 55  TQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFI 114
            QL+ L  L+      + L+GG T++IGDPSF+   R+    +EI+EN E I+      +
Sbjct: 105 VQLITLDILRNHKTDVVVLLGGSTTMIGDPSFQQADRKRPFHEEIRENEESIRSTIVRLL 164

Query: 115 --------------KY---GTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFE 157
                          +      K    ++NN  W   +  +D L   G  FS++R+L  +
Sbjct: 165 LRGGTPNMSTSPLGDFSIDEPNKGSLTIVNNREWYDQMDLVDFLTH-GQHFSLHRILKKD 223

Query: 158 SVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK 217
             +++LK   +L+  + NY+ILQ+YDFV L K Y C +Q+GGSDQWGNI  GI+L + L 
Sbjct: 224 CFKAKLK-GNNLTLKDLNYLILQSYDFVHLYKRYRCCIQIGGSDQWGNIQSGIELCQHLC 282

Query: 218 TPKLFALTSPLLTTASGTKMGKTL-----SGAIWLNKEMTSPYNFWQYWRNIDDADVVSF 272
             +L+ LT+ LL   + TK  K+L        IW++++ T P+ FW + RN+DD  V S+
Sbjct: 283 NEQLYGLTTNLLLHRNDTKYSKSLFEQNRKMPIWIDRDYTPPFLFWNFLRNVDDQQVDSY 342

Query: 273 AKRLTTLPMSEIDRM-----------AKLQGKEINEAKKIIATEITTMVHGREEAEKAAT 321
              LT L +   D                    IN  K+ +A  +T  ++G E      T
Sbjct: 343 LCMLTGLEVQGGDPPSEPTPSPSEGAEATGDAHINRKKEKLADAVTAFIYGEETVRTIHT 402

Query: 322 AAM-------ECFDMSIHSQHMPTISISKDEV-SRGMGLLTLIVKAGFATSTNEARRHLK 373
            +           D     +  P I I + ++ ++ + ++ ++ +   A +  EA+  L 
Sbjct: 403 LSRLLKEDRFAVVDRVDQLKVFPFILIRRSDLHNKQISIVHILRRFHVAATNKEAKEKLA 462

Query: 374 SNAIKINNSIISNEKLQIKLQD-----FDSTGNIKLSFGKKNHIIC 414
              I +N  ++ + K ++ L        D +    L  G+K +   
Sbjct: 463 QRCIYLNRRLVEDAKYRLSLASSFVRAKDGSYYAVLGLGRKTYYSV 508


>gi|163802290|ref|ZP_02196184.1| tyrosyl-tRNA synthetase [Vibrio sp. AND4]
 gi|159173819|gb|EDP58633.1| tyrosyl-tRNA synthetase [Vibrio sp. AND4]
          Length = 262

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 66/279 (23%), Positives = 119/279 (42%), Gaps = 21/279 (7%)

Query: 141 LREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGS 200
           +  + +  +V RML  +  + R    Q ++  EF Y +LQ +D V +    +  +++GG+
Sbjct: 1   MIRLAANQTVARMLERDDFKKRYAGGQPIAIHEFMYPLLQGWDSVAM----ETDVELGGT 56

Query: 201 DQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQ 259
           DQ  N++ G +L +         L  PLL    G  KM K+    I +++   +P   + 
Sbjct: 57  DQKFNLLMGRELQKSHGQKPQVVLMMPLLVGLDGEKKMSKSSGNYIGISE---APSEMFG 113

Query: 260 YWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATEITTMVHGREEAE 317
              +I D  + S+ + L+  P+ EI +       GK   + K ++A EI    H   +A+
Sbjct: 114 KIMSISDVLMWSYYELLSFRPLEEIAQFKADVEAGKNPRDIKVLLAKEIIARFHSEADAD 173

Query: 318 KAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAI 377
            A    +  F  +     MP       +   G  +  L+ +AG   ST+EA R +K  A 
Sbjct: 174 AAEQEFVNRFAKNQIPDEMPEF-----DFEAGTPVANLLKEAGLCASTSEAMRMVKQGAA 228

Query: 378 KINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           KI    +++ K   ++      G      GK+      +
Sbjct: 229 KIEGEKVADAKFAPEV------GTYVFQVGKRKFARITI 261


>gi|297161577|gb|ADI11289.1| tyrosyl-tRNA synthetase [Streptomyces bingchenggensis BCW-1]
          Length = 472

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 87/364 (23%), Positives = 153/364 (42%), Gaps = 23/364 (6%)

Query: 24  PRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGD 83
            R  +   +   ++  +G D TA+ +H GH   ++ L   Q+ GH    L+G  T+ IGD
Sbjct: 68  ERIEERRTAGRGLSLKLGIDPTATDVHLGHAVPMIALSRFQRMGHDVTLLIGDFTAKIGD 127

Query: 84  PSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLRE 143
           P+ R   R  +   +I  N+   +     F  +           N  WL    + +LL  
Sbjct: 128 PTGRTAERPPLTDDDIARNLAGYRDQVRPFFDF----EKVSFRQNSEWLAPYTFPELLGL 183

Query: 144 IGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQW 203
           +      +++L  +  R+RL     L+  E  Y I Q  D V L    +C +++GG+DQ 
Sbjct: 184 LA-QVPASQLLQRDDFRNRLAEGSGLTMSELLYPIAQGLDSVAL----ECDIELGGADQL 238

Query: 204 GNIICGIDLGERLKTPKLFALTSPLLTTASGT--KMGKTLSGAIWLNKEMTSPYNFWQYW 261
            N+  G  L E         +T PL+    GT  KM K+    I L+       + +   
Sbjct: 239 LNLQMGRKLMELRGQQPQLVVTMPLIEGTDGTGAKMSKSKGNYIALSATA---EDVFGKI 295

Query: 262 RNIDDADVVSFAKRLTTLPMSEID-RMAKLQGK--EINEAKKIIATEITTMVHGREEAEK 318
            +I D  +  + +  T    SEID    +L+ +     + KK++A E+ T ++G   A  
Sbjct: 296 MSIPDRLMAPYLRAWTEWTDSEIDLVKGRLEDRSLHPMDLKKVLAGEMVTALYGLPAAMS 355

Query: 319 AATAAMECFDMSIHS--QHMPTISISKDEVSRGMGLLTLIVK-AGFATSTNEARRHLKSN 375
           A    +  F     +  + +P +  ++        + T++ K   F  S + ARR  K N
Sbjct: 356 ARAGFVAQFSKKSFTDVEALPEVDAAEHGAE---SVATVLSKVLQFQPSASAARRVAKQN 412

Query: 376 AIKI 379
            +++
Sbjct: 413 GLRL 416


>gi|289642116|ref|ZP_06474268.1| tyrosyl-tRNA synthetase [Frankia symbiont of Datisca glomerata]
 gi|289508079|gb|EFD29026.1| tyrosyl-tRNA synthetase [Frankia symbiont of Datisca glomerata]
          Length = 467

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 95/407 (23%), Positives = 165/407 (40%), Gaps = 39/407 (9%)

Query: 24  PRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGD 83
            R ++         A  G D T   +H GH   +++L   Q+ GH+ + ++G  T+ IGD
Sbjct: 69  ERIVEAAKKDRPFIAKFGIDPTGHEVHLGHAVPMLILSRFQRMGHEVVFIVGDVTAKIGD 128

Query: 84  PSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLRE 143
           PS R + R  +  ++I  N+   +   + F  +    T A    N  WL  +K   L+ E
Sbjct: 129 PSGRSDERPALTDEDIVRNLATYREQVAPFFDF----TRARFRRNGDWLREVKLPQLI-E 183

Query: 144 IGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQW 203
           I +   V+  L  E  R RL   Q LS  E  Y ++ A D VE+  +    L++GG DQ+
Sbjct: 184 IAAQIPVSMSLQREDFRKRLDAGQGLSLAEVLYSVVMALDSVEINTD----LEVGGIDQF 239

Query: 204 GNIICGIDLGERLKTPKLFALTSPLLTTASGT--KMGKTLSGAIWLNKEMTSPYNFWQYW 261
            N+     +           + + L+    GT  KM K+    + L          +   
Sbjct: 240 LNMQMCRHVMHIRGQVPELVVATSLIEGTDGTGAKMSKSRGNYVPLTAPAG---EIFGKI 296

Query: 262 RNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAKKIIATEITTMVHGREEAEK 318
            ++ D  V  + + L+    SE+    +          + KKI+A E+T  VHG + A K
Sbjct: 297 MSVPDRLVTPYFQALSEWLDSELAVAEERLAAGSLHPMDLKKILAGEVTAAVHGVDAAMK 356

Query: 319 AATAAMECFDMSIHS--QHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNA 376
           A    +  F        +++P ++        G  +   +   GFA S  + RR  + N 
Sbjct: 357 AREEFVARFSRRAFGDVENLPEVA------DLGQSVTDAVKALGFARSNGDVRRVAQQNG 410

Query: 377 IKI------NNSIIS---NEK-----LQIKLQDFDSTGNIKLSFGKK 409
           +++          I+   +E        +K +  +  G+  L  G+K
Sbjct: 411 LRLVVEAEGGQEQITLTADEAREPLMALVKDKLGERPGDYYLKVGRK 457


>gi|156306410|ref|XP_001617599.1| hypothetical protein NEMVEDRAFT_v1g157233 [Nematostella vectensis]
 gi|156194748|gb|EDO25499.1| predicted protein [Nematostella vectensis]
          Length = 214

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 92/209 (44%), Positives = 131/209 (62%), Gaps = 1/209 (0%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
            L  L  RG + Q+++  EL     QG VT Y G+D TA SLH G L  L+ L   Q  G
Sbjct: 6   LLEDLKARGLVAQMTSEEELQAHLEQGSVTLYCGFDPTADSLHIGSLVPLLTLRRFQNYG 65

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKP++L+GG T +IGDPSF+ + R++     +   +EK+K   S+FI + +G   A ++N
Sbjct: 66  HKPLALVGGATGLIGDPSFKAQERKLNDDATVAGWVEKLKAQVSAFISFDSGANSAEVVN 125

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDFVE 186
           N  W   +  +  LR++G  FSVN+M++ ESV+ R+ RE + +SF EF YMILQ+YDF +
Sbjct: 126 NLDWTQDMNILSFLRDVGKHFSVNQMIAKESVKQRIDREGEGISFTEFTYMILQSYDFQQ 185

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGER 215
           L  ++ C LQ+GGSDQWGNI  G +L  R
Sbjct: 186 LNLSHRCTLQIGGSDQWGNITGGTELTRR 214


>gi|158316978|ref|YP_001509486.1| tyrosyl-tRNA synthetase [Frankia sp. EAN1pec]
 gi|158112383|gb|ABW14580.1| tyrosyl-tRNA synthetase [Frankia sp. EAN1pec]
          Length = 465

 Score =  277 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 94/406 (23%), Positives = 164/406 (40%), Gaps = 45/406 (11%)

Query: 28  DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFR 87
           D         A  G D T + +H GH   ++LL    + GH+ + ++G  T+ IGDPS R
Sbjct: 73  DAAARSRPFVAKFGIDPTGAEVHLGHAVPMLLLSRFARMGHRVVFIVGDITAKIGDPSGR 132

Query: 88  DESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSF 147
            + R  +  ++I  N+   +   + F  +      A    N  WL  ++   LL EI S 
Sbjct: 133 SDERPALTDEDIARNLTTYRAQVTPFFDF----ERAEFRRNGDWLREVRLPRLL-EIVSR 187

Query: 148 FSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNII 207
             V+  L  E  R RL     LS  E  Y ++ A D VE+  +    L++GG DQ+ N+ 
Sbjct: 188 IPVSMSLQREDFRRRLDAGHGLSLAELLYSVVMALDSVEVDSD----LEIGGIDQFLNMQ 243

Query: 208 CGIDLGERLKTPKLFALTSPLLTTASGT--KMGKTLSGAIWLNKEMTSPYNFWQYWRNID 265
               + E         + + L+    GT  KM K+    + L     +P   +    ++ 
Sbjct: 244 MCRKVMEICGQTPEIVVATSLIEGTDGTGAKMSKSRGNYVPLTA---APGEIFGKIMSVP 300

Query: 266 DADVVSFAKRLT---TLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATA 322
           D  V  + + L+      ++ +    +       + KKI+A E+T  +HG + A  A   
Sbjct: 301 DRLVEPYFRALSEWRDSELAVLAARREAGTAHPMDLKKILAGEVTAAIHGVDAAMTARAE 360

Query: 323 AMECFDMSIHSQ--HMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKIN 380
            +  F     ++   +P +S        G  +   +   GFA S  + RR  + N +++ 
Sbjct: 361 FVARFSRRTFAEVDDLPVLS------DLGATVADAVRGLGFAKSNGDVRRVAEQNGLRL- 413

Query: 381 NSIISNEK---------------LQIKLQDFDST--GNIKLSFGKK 409
             ++ +E+               L   L+D      G + L  G+K
Sbjct: 414 --VVESEEGQTQVPLTPDDVREPLSAVLKDRLDGRPGAVYLKVGRK 457


>gi|257069983|ref|YP_003156238.1| tyrosyl-tRNA synthetase [Brachybacterium faecium DSM 4810]
 gi|256560801|gb|ACU86648.1| tyrosyl-tRNA synthetase [Brachybacterium faecium DSM 4810]
          Length = 416

 Score =  276 bits (707), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 94/397 (23%), Positives = 162/397 (40%), Gaps = 23/397 (5%)

Query: 24  PRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGD 83
              LD L     +    G DLTA  LH GH   L ++  LQ  GH  I L+G  TS IGD
Sbjct: 38  EDLLDRLREGRPLRIKFGVDLTAPDLHLGHAVNLWMMRVLQDQGHTVIFLLGDTTSRIGD 97

Query: 84  PSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLRE 143
           P+ R  +R ++  ++I+EN E      +  ++  +      +  N  W   +    LLRE
Sbjct: 98  PTGRSTTRPVLTEEQIRENAESFLAQVTRVLR--SEPELLRIRRNSEWFDEMGVPGLLRE 155

Query: 144 IGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQW 203
           + S  +   ++S +  R+RL     ++  E  Y +LQ +D V L  +    L + G+DQ 
Sbjct: 156 L-SLVTHAHLVSRDMFRARLAAGSEIAMHELIYPVLQGFDSVALDSD----LTIVGTDQL 210

Query: 204 GNIICGIDLGERLKTPKLFALTSPLLTTAS-GTKMGKTLSGAIWLNKEMTSPYNFWQYWR 262
            N   G +L  +        +TS +      G K  K+L   +       SP   +    
Sbjct: 211 FNEAMGRELQVKHGQRPQTVITSTVTPGLDGGPKQSKSLGNYV---PLCASPGEKFGRLM 267

Query: 263 NIDDADVVSFAKRLTTLPM---SEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKA 319
            + D  V ++A+  T LP+   +E+ R A   G    +AK  +A  +     G + A  +
Sbjct: 268 TLQDELVGTWARVYTDLPLAQCAELGRRADAGGAAARDAKLDLAEAVVRRHDGADAARHS 327

Query: 320 ATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKI 379
               +  F        M  + +           L L++ A    S + ARR L   A+ +
Sbjct: 328 REEFVRVFSAGERPTDMTPLPLE----PGTRTALDLVLAARPELSRSAARRLLSGGAVTL 383

Query: 380 NNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            +S +   + ++ ++D        +  G++      +
Sbjct: 384 EDSRLREAEEEVAVRDGQ-----VVKAGRRRWFRIEM 415


>gi|163785347|ref|ZP_02179985.1| tyrosyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
 gi|159879385|gb|EDP73251.1| tyrosyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
          Length = 278

 Score =  275 bits (705), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 77/282 (27%), Positives = 127/282 (45%), Gaps = 18/282 (6%)

Query: 139 DLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMG 198
           DL+R + + ++V RML  +  + R    + ++  EF Y +LQAYD V +  +    +++G
Sbjct: 3   DLIR-LTARYTVARMLERDDFKKRFSENKPIAIHEFIYPLLQAYDSVAIKAD----VELG 57

Query: 199 GSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYN 256
           GSDQ  N++ G D+           A+  PLL    G  KM K+    I + +    P  
Sbjct: 58  GSDQRFNLLIGRDIQREYGIEKPQVAILLPLLVGTDGVRKMSKSYGNYIGITEP---PEE 114

Query: 257 FWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAKKIIATEITTMVHGR 313
            +    +I D  +  + K LT L   EI++M +   K      + KK +A  I    H +
Sbjct: 115 MFGKLMSIPDELMWDYWKFLTDLTEEEIEKMKEDVEKGILHPMDVKKELAMYIVERFHSK 174

Query: 314 EEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLK 373
           E+A KA     +        +++P   I      + + L  L+ K GFA+S +EARR +K
Sbjct: 175 EDAVKAKEHFEKVHSKRELPENIPEPEIIISSEEKKIPLYELVYKLGFASSKSEARRLIK 234

Query: 374 SNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           S A+KIN    ++   ++ L          L  GK+      
Sbjct: 235 SGAVKINGEKFTDFNFEVDLS-----KEFVLQVGKRKFARIK 271


>gi|126640129|ref|YP_001083113.1| tyrosyl-tRNA synthetase [Acinetobacter baumannii ATCC 17978]
          Length = 324

 Score =  275 bits (705), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 75/341 (21%), Positives = 144/341 (42%), Gaps = 23/341 (6%)

Query: 80  IIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYID 139
           +IGDP+ +  +R  +  ++++ N +  +      +     K    +  N  W       D
Sbjct: 1   MIGDPTGKSATRPPLSREQVEANAKTYQEQVFKILDPNKTK----VRFNSEWFNQKSAAD 56

Query: 140 LLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGG 199
           L+ ++ S  +V+RML  +    R    Q ++  EF Y ++Q YD + L    +  +++GG
Sbjct: 57  LI-QLASQQTVSRMLERDDFTKRYNNHQPIAIHEFLYPLVQGYDSIAL----EADVELGG 111

Query: 200 SDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFW 258
           +DQ  N++ G  L  R        +T P+L    G  KM K+L   I +     +P   +
Sbjct: 112 TDQTFNLLMGRTLQSRYGQESQVCITVPILEGLDGVNKMSKSLGNYIGV---FDAPGAMY 168

Query: 259 QYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKIIATEITTMVHGREEA 316
           Q   ++ D+ +  +   L+   + EI         G+   E K+I+A E+    H  E A
Sbjct: 169 QKVLSMPDSLIERYFDLLSFKSLDEIKALLDEIAAGRNPQEVKRILALELVERFHDAEAA 228

Query: 317 EKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNA 376
             A  +A             P ++IS+ E    + + T++  AG   +   A+  +   A
Sbjct: 229 ANAHKSAGNRITEGEVPADTPEVTISRGEFGGEIFIATILRVAGLNPNAAAAKDAVARGA 288

Query: 377 IKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           +K++ +++ +    +K       G   +  GKK   I  + 
Sbjct: 289 VKVDWNVV-DASFSVKE-----NGTFIIQSGKK--AIARVT 321


>gi|221056076|ref|XP_002259176.1| Tyrosine--tRNA ligase [Plasmodium knowlesi strain H]
 gi|193809247|emb|CAQ39949.1| Tyrosine--tRNA ligase, putative [Plasmodium knowlesi strain H]
          Length = 519

 Score =  275 bits (703), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 137/471 (29%), Positives = 214/471 (45%), Gaps = 63/471 (13%)

Query: 3   AFKSDFLSILSERGFIHQISNPRELDILC--------SQGVVTAYIGYDLTASSLHAGHL 54
             KS  L  L ER  IH +S+   +D +          +   + Y+G D+    LH G+L
Sbjct: 46  EIKSKALKKLFERKLIHYVSDIEGVDNILYHNETESKKEKRKSVYLGIDVNCKYLHLGNL 105

Query: 55  TQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRR---------------------M 93
            QLM+L  L+      + L+GG T+ IGDPSF+   RR                     +
Sbjct: 106 LQLMILDILRNHNTDIVVLLGGSTTKIGDPSFQQAERRKPIHEEISENEESIKGNIIRLL 165

Query: 94  MRSQEIQENI------EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSF 147
           +R +E+          +        F  +   K    ++NN  W   +   D L   G +
Sbjct: 166 LRGEELNVGTSPGGKYDMGGNTQDEFSIHRPNKGSLTIVNNRQWYKQMDLADFLIH-GQY 224

Query: 148 FSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNII 207
           F+++++L  E  + +LK   +L+  + NY+ILQ+YDFV L K Y C +Q+GGSDQWGNI 
Sbjct: 225 FALHKILKKECFKDKLK-GNNLTLKDLNYLILQSYDFVHLYKKYRCFIQIGGSDQWGNIQ 283

Query: 208 CGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL-----SGAIWLNKEMTSPYNFWQYWR 262
            GI+L + L   +L+ LTS LL   + TK  K+L        IW++KE T P+ FW + R
Sbjct: 284 SGIELCQHLHNTQLYGLTSNLLLHKNNTKYSKSLFEQNRKIPIWIDKEYTPPFLFWNFLR 343

Query: 263 NIDDADVVSFAKRLTTL------PMSEIDRMAKL--QGKEINEAKKIIATEITTMVHGRE 314
           NIDD  V S+   LT L      P S+I    +      +IN AK+ +A  +TT V+G E
Sbjct: 344 NIDDQQVDSYISMLTDLDVQSRNPSSDITSGGEDYHDDAQINRAKEKLADSVTTFVYGAE 403

Query: 315 EAEKAA-------TAAMECFDMSIHSQHMPTISISKDEV-SRGMGLLTLIVKAGFATSTN 366
                               D     +  P I I+K+++    + ++ ++ K   A++  
Sbjct: 404 TVCTIHTLNRLLKEDEFSVIDRVDQLKVFPFIVINKNDIHKNDISIVHILRKFEVASTNK 463

Query: 367 EARRHLKSNAIKINNSIISNEKLQIK-----LQDFDSTGNIKLSFGKKNHI 412
           EA+  L    I +N  +I N K  +      ++  D      L  G+K + 
Sbjct: 464 EAKEKLAQRCIYLNRQLIDNAKYHLSMPSSFVKAKDGNYYAILGLGRKTYY 514


>gi|316970901|gb|EFV54757.1| NEDD8-activating enzyme E1 catalytic subunit [Trichinella spiralis]
          Length = 819

 Score =  275 bits (703), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 105/403 (26%), Positives = 176/403 (43%), Gaps = 52/403 (12%)

Query: 15  RGFIHQISNPRELDILCSQGVV--TAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPIS 72
           RG I        L+ L S   V    Y G+D +  SLH G+L                  
Sbjct: 33  RGAIKTSFPDSLLNNLESIRGVQPCIYAGFDPSGDSLHIGNL------------------ 74

Query: 73  LMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKT----------D 122
                TS +GDPS R   R  +   EIQ N + I+    S ++                 
Sbjct: 75  ----ATSRLGDPSGRSVERDRLSLDEIQSNSQCIEFTLKSILRNFEKIKISLNSTNVLST 130

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
             +L+N  W   +  +D    +G  F +  M+  + +R R+ RE  +S+ EF+Y  LQAY
Sbjct: 131 PAVLDNTDWYHQMNVLDFFDAVGRAFRLRHMMDKQCIRERIHRE-GMSYAEFSYQTLQAY 189

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           D++ L + + C LQ+GG+DQ GNI  G DL         + L  PL+ +++G K+GK++ 
Sbjct: 190 DWLHLYEKFGCLLQIGGADQTGNIHSGHDLIRFFHNQSAYGLLVPLMLSSTGEKIGKSVG 249

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKK 300
            ++WL+   TS + F+QY+  + D +  S  K  +    ++++R      Q  E   A++
Sbjct: 250 SSLWLSSSRTSSFVFYQYFLQLTDEEAKSMMKLFSFCSEADLERILDDHCQQPEKRIAQR 309

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHS-------------QHMPTISISKDEVS 347
            +A ++T +VH       A       FD  +H              + +P + +S+  + 
Sbjct: 310 FLADQLTLLVHSESGLALAKRITEILFDHRLHGIGDLDENDLNILCREVPGVQLSRQAL- 368

Query: 348 RGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQ 390
             +  ++L +KAG     N A R +      +NN  I+N  + 
Sbjct: 369 -PISAISLALKAGCFDDVNTAERTINQGGFHVNNFKITNPTIV 410


>gi|297170578|gb|ADI21605.1| tyrosyl-tRNA synthetase [uncultured Oceanospirillales bacterium
           HF0130_06B06]
          Length = 233

 Score =  274 bits (701), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 90/223 (40%), Positives = 137/223 (61%), Gaps = 1/223 (0%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M     D +S L  R  I Q++   +L    ++G    Y G+D TA SLH G +  L++L
Sbjct: 1   MGTKYEDIISELENRDLIAQLAGEDKLKEHIAEGKRAVYCGFDPTAESLHIGSVVPLLVL 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GHKPI+L+GG T +IGDPSF+   R++  S  ++E +E++K   S F+ +  G 
Sbjct: 61  RRFQLAGHKPIALVGGATGLIGDPSFKSAERQLNPSNVVEEWVERLKPQLSQFLDFDCGT 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMIL 179
             A+++NN  W  +   +  LR++G  FSVN M+  +SV+ R++R  + +S+ EF+YM+L
Sbjct: 121 NSAVLVNNLEWTQNRDLLTFLRDVGKHFSVNSMVQKDSVKQRIERDGEGISYTEFSYMLL 180

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLF 222
           Q+ DF EL K +DC +Q+GGSDQWGNI  GIDL  R+   ++F
Sbjct: 181 QSLDFAELHKRFDCSIQVGGSDQWGNITGGIDLTXRIYQKQVF 223


>gi|156835905|ref|XP_001642206.1| hypothetical protein Kpol_1074p1 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156112662|gb|EDO14348.1| hypothetical protein Kpol_1074p1 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 351

 Score =  272 bits (697), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 98/352 (27%), Positives = 169/352 (48%), Gaps = 30/352 (8%)

Query: 94  MRSQEIQENIEKIKGIFSSF------------IKYGTGKTDALMLNNETWLCSIKYIDLL 141
           M S+   +N+  I     +F            I+         ++NN +W   +K +D L
Sbjct: 1   MDSETRIDNVSAIGRQLENFFTTAYRYCERRGIEKEIDLRRFQVVNNHSWWKDVKMLDFL 60

Query: 142 REIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSD 201
              G    +  ML+ +S+ +R+     L F EF Y +LQAYDF  L KN    +Q+GG D
Sbjct: 61  GNYGRHIRIQNMLARDSISARIGTSDGLGFNEFTYQVLQAYDFYHLYKNEGVSIQVGGGD 120

Query: 202 QWGNIICGIDLGERLK----TPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNF 257
           QWGNI  GID   R++        +A+TS LLTTA+G K GK+   AI++N+++ SPY+ 
Sbjct: 121 QWGNITAGIDFISRVEPNSKKSPPYAITSSLLTTANGDKFGKSAGNAIFINRDINSPYDI 180

Query: 258 WQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIATEITTMVHGREE 315
           +QY+ N++DAD+  F K  T L + +I+ + K+  K+    E +K +A E+T ++HG E 
Sbjct: 181 FQYFLNVEDADIEKFLKIFTLLSLEDINSIMKMHNKDPKLREGQKTLAREVTELIHGYEN 240

Query: 316 AEKAATAAMECFDMSIHSQHMPTISI--------SKDEVSRGMGLLTLIVKAGFATSTNE 367
              A   +   F+  +    +   S+        + + V     L+ +I K     S +E
Sbjct: 241 CRFAEILSDMLFNDKLKDSSVSVDSLLDAAYVAGNYETVPTRSSLVEIISKVTNC-SNSE 299

Query: 368 ARRHLKSNAIK--INNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           A+R +    +   ++   +++  + I          + L  GK+   + ++ 
Sbjct: 300 AKRRISQGGVYLGLDRIQVTDPSVSIN-DYILQNEVLILRTGKRKCYVVNMS 350


>gi|308492005|ref|XP_003108193.1| CRE-YARS-1 protein [Caenorhabditis remanei]
 gi|308249041|gb|EFO92993.1| CRE-YARS-1 protein [Caenorhabditis remanei]
          Length = 468

 Score =  272 bits (696), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 106/450 (23%), Positives = 197/450 (43%), Gaps = 49/450 (10%)

Query: 7   DFLSILSERGFIHQISNPRELDIL---CSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           D++  LS+R  +        L+       Q     Y G+D TA SLH G+L  L+ L   
Sbjct: 25  DYIRDLSKRKPLQHSYPADLLNKYEAELKQLPPYVYAGFDPTAESLHVGNLLILVNLIRC 84

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q+ G +PI+L+G  T+ IGDPS +   R ++    +  N +K+     +        ++ 
Sbjct: 85  QQFGLRPIALIGEFTASIGDPSGKKSERDLLGEDVVIHNSKKVSEQIRNVFANTCRSSEP 144

Query: 124 LM-LNNETWLCS----------------IKYIDLLREIGSFFSVNRMLSFESVRSRLKRE 166
            + +NN  WL                  I   D  RE      + +ML  ++++SRL  E
Sbjct: 145 PIVVNNNDWLGKVNSNIVNILYLFSHFQISLRDFFREC-KSMQLGKMLRMKTIKSRL--E 201

Query: 167 QSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK----LF 222
             LS+ EF+Y  +QAYD+  L++ + CR Q+GG DQ G++  G    ++           
Sbjct: 202 TGLSYTEFSYQTMQAYDWYTLSEKFGCRFQLGGYDQLGHLDFGAHYIKKRGNLSDNRFAA 261

Query: 223 ALTSPLLTTASGTKMGKTL-SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPM 281
            +  P+LT ++G K+GK+   GA+WL+   TSP++F+Q++  + D          +   +
Sbjct: 262 GVCFPILTDSAGNKLGKSEGGGALWLDPVKTSPFHFYQFFAQLHDDKAEELLLLFSLRGV 321

Query: 282 SEIDRMAKLQGKEINE--AKKIIATEITTMVHGREEAEKAATAAMECFDM------SIHS 333
            +++ + +     + +  A+K +A E+T MVHG +  + A       F         +  
Sbjct: 322 EDLEELLQNHRNNLGKWIAQKELAMEVTKMVHGEDGLDSALRCTKAMFGSKKADLTGLSR 381

Query: 334 QHMP-----TISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEK 388
             +      TI + K+++S    L  +  +        +    ++  A  +N +   N  
Sbjct: 382 SEILKLFRTTIDLKKEDISSMGDLANVTRQG-----NGKGYLLMQKGAFSVNGTKKVNPA 436

Query: 389 LQIK--LQDFDSTGNIKLSF-GKKNHIICH 415
             I+       +  ++ L   GK+++ +  
Sbjct: 437 ESIEGVSSSLPALTDLTLVCWGKRDYRLVR 466


>gi|241068635|ref|XP_002408493.1| tyrosyl-tRNA synthetase, putative [Ixodes scapularis]
 gi|215492481|gb|EEC02122.1| tyrosyl-tRNA synthetase, putative [Ixodes scapularis]
          Length = 211

 Score =  270 bits (691), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 114/207 (55%), Positives = 152/207 (73%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           F+     +G+ HQ ++   L  +  +  + AYIG+D TA+SLH G L Q+M+L  LQ+ G
Sbjct: 4   FIEEFINKGYFHQCTDLDRLTAITKETKIAAYIGFDCTATSLHIGSLMQIMILRLLQQYG 63

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           HKPI ++GGGTS IGDPS +DE+R+ +   +I+ N E IK   S FIK+G GK+DA+ML+
Sbjct: 64  HKPIVIIGGGTSKIGDPSGKDEARKALTKDDIKRNAEGIKKSLSKFIKFGDGKSDAIMLD 123

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  WL S+ Y+D LR+ GS+FSVNRML+ +SVR RL+REQ LSFLEFNYM+LQAYDF  L
Sbjct: 124 NAEWLDSLNYLDFLRDFGSYFSVNRMLTMDSVRLRLEREQHLSFLEFNYMLLQAYDFYYL 183

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGE 214
           +K+Y+C LQ+GGSDQWGNI+ G DL  
Sbjct: 184 SKHYNCSLQLGGSDQWGNIVMGADLIR 210


>gi|254243745|ref|ZP_04937067.1| tyrosyl-tRNA synthetase 2 [Pseudomonas aeruginosa 2192]
 gi|126197123|gb|EAZ61186.1| tyrosyl-tRNA synthetase 2 [Pseudomonas aeruginosa 2192]
          Length = 254

 Score =  268 bits (687), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 69/253 (27%), Positives = 112/253 (44%), Gaps = 13/253 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG    +     +  L     +    G+D TA  LH GH   +  L   Q  GH+ I
Sbjct: 10  LIQRGADEILVEAELVAKLKRGQPLRIKAGFDPTAPDLHLGHTVLINKLRQFQDLGHQVI 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T +IGDPS +  +R  +  +++ EN E  K      +     +    +  N TW
Sbjct: 70  FLIGDFTGMIGDPSGKSVTRPPLTREQVLENAETYKSQVFKILDPAKTE----VAFNSTW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +  +   D +R + S ++V RML  +    R    Q ++  EF Y ++Q YD V L  ++
Sbjct: 126 MDQLTPADFIR-LASQYTVARMLERDDFSKRYASNQPIAIHEFLYPLVQGYDSVALKSDF 184

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKE 250
               ++GG+DQ  N++ G +L           LT PLL    G  KM K+L   I + + 
Sbjct: 185 ----ELGGTDQKFNLLMGRELQRAYGQEAQVILTMPLLEGLDGVKKMSKSLGNYIGIQE- 239

Query: 251 MTSPYNFWQYWRN 263
             +P   +    +
Sbjct: 240 --APGVMYSKLVS 250


>gi|261885062|ref|ZP_06009101.1| tyrosyl-tRNA synthetase [Campylobacter fetus subsp. venerealis str.
           Azul-94]
          Length = 307

 Score =  268 bits (686), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 81/328 (24%), Positives = 136/328 (41%), Gaps = 27/328 (8%)

Query: 94  MRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRM 153
           M    I +N +  K      +     ++   ++ N  WL  +   D L  + S F+V RM
Sbjct: 1   MDDDTIAKNAKTYKEQVFKILD----ESKTEVMFNSAWLSKLG-ADGLIALASTFNVARM 55

Query: 154 LSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLG 213
           L  +    R K E  ++  EF Y +LQ YD V +     C ++MGG+DQ  N++ G  LG
Sbjct: 56  LERDDFTKRYKNETPIAISEFLYPLLQGYDSVAMK----CDIEMGGTDQKFNLLMGRTLG 111

Query: 214 ERLK-TPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVS 271
                  +   +  PLL    G  KM K+L   I + +      + +    +I D  +  
Sbjct: 112 RTYGIGKEQAIIMMPLLVGLDGVNKMSKSLGNYIGVTESAN---DIFAKTLSISDDLMWV 168

Query: 272 FAKRLTTLPMSEI---DRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFD 328
           + + L+     +I               + K+ +A EIT+  HG  EA  A         
Sbjct: 169 WYELLSDKSSDDILNLKADVSSAKLHPKKVKENLALEITSRFHGISEAGAAKDEFDRVHS 228

Query: 329 MSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEK 388
                  MP   I KDE    + ++  +      +S  EARRH+K++A+ +N   + +E+
Sbjct: 229 KKELPSDMPEFEIVKDE----IWIVEALSNCALCSSNAEARRHIKADAVSVNQQKVIDEQ 284

Query: 389 LQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           L++      + G   L  GKK +    +
Sbjct: 285 LKL------AKGEYILQVGKKTYAKLKV 306


>gi|68073779|ref|XP_678804.1| tyrosine--tRNA ligase [Plasmodium berghei strain ANKA]
 gi|56499388|emb|CAH96531.1| tyrosine--tRNA ligase, putative [Plasmodium berghei]
          Length = 548

 Score =  265 bits (678), Expect = 8e-69,   Method: Composition-based stats.
 Identities = 137/486 (28%), Positives = 214/486 (44%), Gaps = 82/486 (16%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILC------SQGVVTAYIGYDLTASSLHAGHLTQL 57
            KS+ L  L ER  I+ IS+ + +D +       ++   + YIG DL    LH G LTQL
Sbjct: 55  IKSNALKKLYERKLINYISDLKNIDKILYENEHENEKKKSVYIGIDLNCKYLHIGSLTQL 114

Query: 58  MLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFI--- 114
             L  L+      I L+G  T+ IGDPSF+   R+   + EI +N + IK     FI   
Sbjct: 115 KTLEILRSYKTDVIILLGNSTTQIGDPSFQLNERKETLNAEICQNEQSIKESIIDFILNN 174

Query: 115 ---KYG--------------------------------------TGKTDALMLNNETWLC 133
               +                                       +GK +  +L N  W  
Sbjct: 175 DNSDFNEKDLHMKELCGINLNQISFQDICRKTDLLSKDEIIYKCSGKGNLRILKNNIWYD 234

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDC 193
            +  ID L+  G  F +N++L  ESV  + +  ++L+  + NY+ LQ+YDF+ L K Y  
Sbjct: 235 KMNVIDFLK-YGEHFGINKLLRKESVIKKYQ-NKNLTLKDLNYISLQSYDFLHLFKKYKT 292

Query: 194 RLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL-----SGAIWLN 248
            +Q+GGSDQWGNI  GI+L + +   +L+ LT+ LL   +  K  K+L        IW++
Sbjct: 293 YIQIGGSDQWGNIQSGIELCQNIYNQQLYGLTTNLLLYKNNIKFSKSLFQENKKLPIWID 352

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPM---SEIDRMAKLQGKE---------IN 296
           KE TSPY FW + RN++D  V S+   LT L +    E+        K          IN
Sbjct: 353 KEYTSPYLFWNFLRNVEDQKVQSYIDMLTNLNINLDEELKNSNNENPKNIIASSYDNIIN 412

Query: 297 EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQH-------MPTISISKDEVSRG 349
             KK +A  IT  ++G+   +K         +   +          +P   I+ + + + 
Sbjct: 413 SVKKKMADHITNTIYGKCVVDKIHKINKIIKNNKFNEIENLQELKILPYNQININLIKQN 472

Query: 350 -MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG-----NIK 403
            + +  ++     A +  EA+  +  N I IN  +I+N K  + + DF  T       + 
Sbjct: 473 KINITDVLKLFQIAMTNKEAKEKINQNCIYINTKLITNPKYILNIMDFLKTKNDNYYYVL 532

Query: 404 LSFGKK 409
           L  GKK
Sbjct: 533 LRLGKK 538


>gi|222870026|gb|EEF07157.1| predicted protein [Populus trichocarpa]
          Length = 351

 Score =  263 bits (674), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 66/241 (27%), Positives = 112/241 (46%), Gaps = 13/241 (5%)

Query: 35  VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMM 94
            +   +G D TA  +H GH   L  +  LQ  GH+ I L+G  T++IGDPS R+ +R  +
Sbjct: 48  PLRIKLGLDPTAPDIHLGHTVVLNKMRQLQDLGHQVIFLIGDFTTLIGDPSGRNSTRPPL 107

Query: 95  RSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRML 154
            +++I+ N E      +  +     +    +  N  W   +    ++ E+ + ++V RM+
Sbjct: 108 TAEQIKVNAETYYTQAAKVLDPARTE----VRYNSEWCDKLGARGMI-ELSAKYTVARMM 162

Query: 155 SFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
                  R     S+S  EF Y +LQ YD V L  +    L+MGG+DQ  N++ G  L +
Sbjct: 163 ERNDFHQRFTDGSSISLHEFLYPLLQGYDSVALRAD----LEMGGTDQKFNLLMGRHLQQ 218

Query: 215 RLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFA 273
                    LT PLL    G  KM K+ +  I + ++  +    +    +I D  + ++ 
Sbjct: 219 EYGQDTQCVLTMPLLVGLDGEHKMSKSKNNYIGITEDANT---MFAKVLSISDTLMWNWW 275

Query: 274 K 274
           K
Sbjct: 276 K 276


>gi|270490521|ref|ZP_06207595.1| tRNA synthetase class I (W and Y) [Yersinia pestis KIM D27]
 gi|270339025|gb|EFA49802.1| tRNA synthetase class I (W and Y) [Yersinia pestis KIM D27]
          Length = 210

 Score =  262 bits (669), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 75/185 (40%), Positives = 113/185 (61%), Gaps = 1/185 (0%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           S+ +  L ERG + Q+++   L    +QG ++ Y G+D TA SLH GHL  L+ L   Q 
Sbjct: 4   SNLIKQLQERGLVAQVTDEDALAERLAQGPISLYCGFDPTADSLHLGHLVPLLCLKRFQL 63

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
            GH+P++L+GG T +IGDPSF+   R++     + E +EKI+   S F+ +  G+  A+ 
Sbjct: 64  AGHRPVALVGGATGMIGDPSFKASERKLNTEDTVNEWVEKIRHQVSPFLDFDCGENSAIA 123

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYDF 184
            NN  W   +  +  LR+IG  FSVN+M++ E+V+ RL R+   +SF EF+Y +LQAYDF
Sbjct: 124 ANNYDWFGGMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDSGISFTEFSYNLLQAYDF 183

Query: 185 VELAK 189
             L K
Sbjct: 184 ACLNK 188


>gi|309365610|emb|CAR98450.1| CBR-YARS-1 protein [Caenorhabditis briggsae AF16]
          Length = 455

 Score =  260 bits (666), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 109/442 (24%), Positives = 195/442 (44%), Gaps = 46/442 (10%)

Query: 7   DFLSILSERGFIHQISNPREL---DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           D++  L +R  +        L   D    Q     Y G+D TA SLH G+L  L+ L   
Sbjct: 25  DYIKDLDKRKPLKHSYPADLLTKFDYELKQIQPYLYAGFDPTAESLHVGNLLILLNLIRS 84

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           Q+ G +PI+L+G  T+ IGDPS +   R ++ S  I  N + +           +  T+ 
Sbjct: 85  QQFGLRPIALIGEFTASIGDPSGKKSERDLLPSDVIVSNAQSVTEQVRRIFANASSDTEP 144

Query: 124 L-MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
             ++NN  WL      D  RE      + +ML  +++++RL  E+ LS+ EF+Y  +QAY
Sbjct: 145 PIIVNNNDWLEKAALRDFFREC-KSMQLGKMLRMKTIKNRL--EKGLSYTEFSYQTMQAY 201

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKL-------FALTSPLLTTASGT 235
           D+  L++ + CR Q+GG DQ G++  G    ++               +  P+LT ++G 
Sbjct: 202 DWYTLSEKFGCRFQLGGYDQLGHLDFGAHYIKKRCNQSQGTDNGFAAGVCFPILTDSAGN 261

Query: 236 KMGKTL-SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE 294
           K+GK+   GA+WL+ + TSP++ +Q++  + D         L+     +++       K 
Sbjct: 262 KLGKSEGGGALWLDPKKTSPFHLYQFFAQLHDDKAEELLLLLSLRNFEDLESSLVKHRKN 321

Query: 295 INE--AKKIIATEITTMVHGREEAEKAATAAMECFDM------SIHSQHMP-----TISI 341
           + +   +  +A EIT +VHG E  + A       F         +  + +      T+ +
Sbjct: 322 LGKWIVQTELAMEITKVVHGEEGLDTALRCTKAMFGSKKADLTGLSKEEVLQMFRTTVDL 381

Query: 342 SKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI--------KL 393
            K+EV     L  L     F +        +K+ A  +N +   +    I        +L
Sbjct: 382 KKEEVISMGKLADL---TRFGSGKGHL--LMKNGAFSVNGAKKVDPTESINSLLSVLPEL 436

Query: 394 QDFDSTGNIKLSFGKKNHIICH 415
           +D        + +GK+++ +  
Sbjct: 437 EDL-----TLIRWGKRDYQLVR 453


>gi|312074099|ref|XP_003139818.1| tyrosyl-tRNA synthetase [Loa loa]
 gi|307765019|gb|EFO24253.1| tyrosyl-tRNA synthetase [Loa loa]
          Length = 552

 Score =  260 bits (665), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 113/427 (26%), Positives = 184/427 (43%), Gaps = 67/427 (15%)

Query: 11  ILSERGFIHQISNPRELD----ILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
            L++R  I   S+P  L      + S      Y G+D TA SLH GHL  +  LF     
Sbjct: 168 DLTKRNLIS-TSHPSNLSSDDFKVVSTLPDVVYAGFDPTAESLHIGHLLVITNLFRATLH 226

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           G   I+L+GG T+ +GDPS     R ++   EI +   KI     + I++          
Sbjct: 227 GCHAIALIGGATAYVGDPSGHVTDRIIVSGNEIDQYAGKINLQLMNSIQFL--------- 277

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
                           E+   F +  ML    V+SR++    LS  EF Y I Q+YD+  
Sbjct: 278 ----------------EVCRDFRLGDMLRLGMVKSRMRDGSGLSCSEFLYQIFQSYDWYR 321

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT--LSGA 244
           L+++Y+C  Q+GG+DQ G+   G D  ++       ++  PLLT A G K+ KT      
Sbjct: 322 LSRDYNCHFQIGGNDQLGHFDAGYDYIKKKTGKLSASICLPLLTDAQGKKLSKTSKEGSN 381

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKII 302
           IWL++  TSP+ F+QY                +   + EI+ + +     + +  A++ +
Sbjct: 382 IWLDERKTSPFTFYQY---------------FSLRNVEEIEEIEREHHANLGKWVAQEKL 426

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHS-QHMPTISISKDEVSRGMGLLTLIVKAGF 361
           A E+T  VHG    + A   +   F  S+   + MPT   S  E   G   +  + ++GF
Sbjct: 427 AEELTKFVHGSNGLKMAKQCSKILFHGSLSELRKMPT---SLIEEQFGSASVQQLFRSGF 483

Query: 362 ATSTNE-ARR----------HLKSNAIKINNSIISNEKLQIKLQDF-DSTGNIKLSF-GK 408
            ++  E A R           +K+ A+K+N +  ++    +          NI L   GK
Sbjct: 484 -STMGELADRVHNGEGSSINKMKAGALKLNGTRFTDPDELVDFDKICLDGKNITLVCWGK 542

Query: 409 KNHIICH 415
           + + +  
Sbjct: 543 RKYHLVR 549


>gi|218458814|ref|ZP_03498905.1| tyrosyl-tRNA synthetase [Rhizobium etli Kim 5]
          Length = 198

 Score =  259 bits (662), Expect = 7e-67,   Method: Composition-based stats.
 Identities = 122/189 (64%), Positives = 151/189 (79%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M  FKSDFL  L ERGFIHQIS+ R LD L ++  VTAYIGYD TASSLH GHLTQ+M+L
Sbjct: 1   MSEFKSDFLRTLKERGFIHQISDERGLDDLFAKETVTAYIGYDPTASSLHVGHLTQIMML 60

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            WLQ TGH+PISLMGGGT ++GDPSF++E+R++M  + I++NI  IK  FS+++ Y    
Sbjct: 61  HWLQATGHRPISLMGGGTGMVGDPSFKEEARKLMTIETIEQNIASIKSCFSNYLDYDKPG 120

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
             ALM+NN  WL S+ Y++ LR++G  FSVNRMLSF+SV++RL REQSLSFLEFNYMILQ
Sbjct: 121 NAALMINNAEWLRSLNYLEFLRDVGRHFSVNRMLSFDSVKTRLDREQSLSFLEFNYMILQ 180

Query: 181 AYDFVELAK 189
           AYDFVELA+
Sbjct: 181 AYDFVELAQ 189


>gi|126666488|ref|ZP_01737466.1| tyrosyl-tRNA synthetase [Marinobacter sp. ELB17]
 gi|126628876|gb|EAZ99495.1| tyrosyl-tRNA synthetase [Marinobacter sp. ELB17]
          Length = 241

 Score =  258 bits (661), Expect = 8e-67,   Method: Composition-based stats.
 Identities = 65/239 (27%), Positives = 105/239 (43%), Gaps = 10/239 (4%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG    I     +  L     +    G+D TA  LH GH   +  L   Q  GH+ I
Sbjct: 10  LIKRGIDELIPEEELVAKLKEGRPLRIKAGFDPTAPDLHLGHTVLINKLRQFQDLGHEVI 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T +IGDPS +  +R  + S+++  N    K      +     +    +  N  W
Sbjct: 70  FLIGDFTGMIGDPSGKSATRPPLTSEQVAANAVTYKEQVFKILDPAKTR----VAFNSEW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +  +   D++   G + +V RML  +    R    Q ++  EF Y ++Q YD V L  + 
Sbjct: 126 MSKMSAADMIALAGQY-TVARMLERDDFDKRYTGGQPIAIHEFLYPLIQGYDSVALKAD- 183

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNK 249
              +++GG+DQ  N++ G  L +         LT P+L    G  KM K+L   + +N 
Sbjct: 184 ---VELGGTDQKFNLLMGRALQKNYGQKPQVILTVPILEGLDGVQKMSKSLGNYVGVND 239


>gi|258597269|ref|XP_001347852.2| tyrosine-tRNA ligase, putative [Plasmodium falciparum 3D7]
 gi|254832636|gb|AAN35765.2| tyrosine-tRNA ligase, putative [Plasmodium falciparum 3D7]
          Length = 561

 Score =  257 bits (657), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 126/513 (24%), Positives = 211/513 (41%), Gaps = 109/513 (21%)

Query: 3   AFKSDFLSILSERGFIHQISNPRELDILC--------SQGVVTAYIGYDLTASSLHAGHL 54
             KS  L  L ER  IH +S+ R +D +          +   + Y G DLT   LH G+L
Sbjct: 44  DIKSKALKKLYERKLIHYVSDIRNIDKILYHNENEKEKKNRKSVYAGIDLTCKYLHLGNL 103

Query: 55  TQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIF---- 110
             L+ L  L+      I L+G  T+ IGDPSF+   R+    ++I EN E I+       
Sbjct: 104 VPLITLDILRNHNTDVIILLGNSTTQIGDPSFQKVERQKTLEKDILENEENIRRTIIELF 163

Query: 111 ----------------------SSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFF 148
                                   FI     K   ++L N  W   +  ID L+  G +F
Sbjct: 164 LQREICEEDMNELIKKSNIERDKEFIYESDNKGSLIILKNSLWYDKMNIIDFLK-YGEYF 222

Query: 149 SVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIIC 208
           S+N++L  E   +++K+   L+  + NY+ LQ++DF+ L   +   +Q+GGSDQWGNI  
Sbjct: 223 SINKLLRKECFLNKIKKN--LTLKDLNYITLQSFDFLHLFNKFKTCIQIGGSDQWGNIQS 280

Query: 209 GIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG-----AIWLNKEMTSPYNFWQYWRN 263
           GI+L + +   +L+ LT+ LL   +  K  K+         IW++K   SPY FW + RN
Sbjct: 281 GIELAQYISNTQLYGLTTNLLVYKNNIKYSKSQFNENKRLPIWIDKNYNSPYLFWNFLRN 340

Query: 264 IDDADVVSFAKRLTTLPM---SEIDRMAKLQGKEINE----------------------- 297
           ++D  V S+   LT L +    EI+ +       +NE                       
Sbjct: 341 VEDQKVQSYIDMLTNLKININQEIETVYNPMDTNLNEILDETLDDSNKKKKNNDNNNNNN 400

Query: 298 ------------------------------AKKIIATEITTMVHGREEAEKAATAAMECF 327
                                         AKK ++  +T+ + G    +K         
Sbjct: 401 NVKDINITTEHNNYSNDISLEKSYEEKINQAKKQLSDSVTSYIFGEHTVKKIHKMKDVLK 460

Query: 328 DMSIHS----QHM---PTISISKDEVSRG-MGLLTLIVKAGFATSTNEARRHLKSNAIKI 379
           +   H       +   P + I+ + +++  + +  L+ K   A++  EA+  +  N I +
Sbjct: 461 NNEFHKINNIDDIKVFPYVEITMEHINKKQINISDLLKKFDIASTNKEAKEKISQNCIYL 520

Query: 380 NNSIISNEKLQIKLQDFD---STGNIKLSFGKK 409
           N  +I++ K  + + +F    +     L  GK+
Sbjct: 521 NELLINDSKYSLNINNFIKLHNNYYAILRLGKR 553


>gi|326912301|ref|XP_003202492.1| PREDICTED: tyrosyl-tRNA synthetase, mitochondrial-like, partial
           [Meleagris gallopavo]
          Length = 271

 Score =  257 bits (656), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 84/267 (31%), Positives = 139/267 (52%), Gaps = 13/267 (4%)

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKL 221
           RL+  + +S  EF Y  LQAYDF+ L +++ CR+Q+GG+DQ GNI+ G +L  ++    +
Sbjct: 1   RLRSAEGMSLAEFLYPALQAYDFLHLHRHHGCRVQLGGADQMGNIMSGYELVTKMTGTDV 60

Query: 222 FALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPM 281
           F +T PL+T+ +G K+GKT   A+WLN++ TSP+  +Q++    D  V  + K  T LP+
Sbjct: 61  FGITVPLITSTTGDKLGKTAGNAVWLNRDKTSPFELYQFFVRQQDDIVEKYLKLFTFLPL 120

Query: 282 SEIDRMAKLQGKEINE--AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS-QHMPT 338
            EID + ++  +E  +   +K +A E+T +VHGRE  E A       +  S+ + + M  
Sbjct: 121 EEIDHIMEMHAREPEKWGPQKRLAAEVTKLVHGREGLESAKRCTKALYHSSVEALEAMSD 180

Query: 339 ISI---------SKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKL 389
             +         ++  +  GM LL L  KA          + +    + +N   ++N + 
Sbjct: 181 QELQELFRQAPSAELILEPGMTLLDLCRKANAIPHGPSGYQKITDGGVSVNGIRVTNPEA 240

Query: 390 QIKL-QDFDSTGNIKLSFGKKNHIICH 415
            + L Q     G   L  GKKN+ I  
Sbjct: 241 VLILGQHILKNGVSLLRIGKKNYYIIK 267


>gi|311894756|dbj|BAJ27164.1| putative tyrosyl-tRNA synthetase [Kitasatospora setae KM-6054]
          Length = 471

 Score =  256 bits (655), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 95/410 (23%), Positives = 166/410 (40%), Gaps = 38/410 (9%)

Query: 25  RELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGD 83
             L  L ++G  +T   G D T + +H GH   ++L   LQ+ GH+ + L+G  T+ IGD
Sbjct: 70  DRLAELLAEGRPLTVKFGIDPTGAEVHLGHAVPMILASRLQRMGHRVVFLVGDITARIGD 129

Query: 84  PSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLRE 143
           PS R   R  +   +++ N+   +    +F  +      A    N  WL  +     L E
Sbjct: 130 PSGRSAERPPLTEDDVRRNVATYRQQVGAFFDF----ERAEFRFNSEWLEPMTLPRFL-E 184

Query: 144 IGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQW 203
           + +    +  L  E  R+RL     L+  E  Y ++ A D VEL  +    +++GG DQ 
Sbjct: 185 VLARLPASAALQREDFRNRLAEGSGLTLAELVYSVVMALDSVELDAD----VELGGLDQL 240

Query: 204 GNIICGIDLGERLKTPKLFALTSPLLTTASGT--KMGKTLSGAIWLNKEMTSPYNFWQYW 261
            N+     +           L + L+    GT  KM K+ +  + L          +   
Sbjct: 241 LNLQMCRRVMTATGRQPEVVLATGLIEGTDGTGAKMSKSRNNYVGL---AFPAEEMFGRL 297

Query: 262 RNIDDADVVSFAKRLTTLPMSEIDRMAKLQG---KEINEAKKIIATEITTMVHGREEAEK 318
            +  D  +  + + LT L   EID +        +     K ++A  +T  VHG   A  
Sbjct: 298 MSCADRLLPGYLRALTELLDEEIDLLLAQVDDGRRHPMAVKTLLAAAVTATVHGEPAALA 357

Query: 319 AATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVK-AGFATSTNEARRHLKSNAI 377
           A  +    F +  +SQ  P  ++   E      L  L+V+ +G   S N+ RR  ++  +
Sbjct: 358 ARDSFRARFSVRRYSQAGPLPTVDPAEHGA-ATLGELLVRVSGELPSLNQVRRVAEAGGL 416

Query: 378 KI-----NNSIIS--------NEKLQIKLQDFD-----STGNIKLSFGKK 409
           +      +    +        +E+L++ L   D     +T  + L  G+K
Sbjct: 417 RFVVEHTDGGQQTVPLGRDDADERLRVVLGAHDLARPQATRRLFLRCGRK 466


>gi|156087218|ref|XP_001611016.1| tyrosyl-tRNA synthetase [Babesia bovis T2Bo]
 gi|154798269|gb|EDO07448.1| tyrosyl-tRNA synthetase, putative [Babesia bovis]
          Length = 605

 Score =  252 bits (645), Expect = 6e-65,   Method: Composition-based stats.
 Identities = 122/526 (23%), Positives = 218/526 (41%), Gaps = 121/526 (23%)

Query: 3   AFKSDFLSILSERGFIHQISNPRELDILCSQGVVT--------AYIGYDLTASSLHAGHL 54
             +S FL  L ERG  H +++   LD    +  ++         Y G DLTA  +H G L
Sbjct: 85  EVRSAFLCELIERGLFHSVTDLEGLDEFLCEHELSAESGLVPAVYYGIDLTADFIHEGTL 144

Query: 55  TQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFR-----------DESRRMM------RSQ 97
            Q++LL      G   + ++GGGT++IGDPSF+              R++        + 
Sbjct: 145 LQILLLRRFLTKGFNVVVVLGGGTTLIGDPSFKARRTKATLNATQNDRKLHNVILNRTAD 204

Query: 98  EIQENIEKIKGIFSSFIKYGTGKT-------------------------------DALML 126
            +  N      I+    K  T K                                + +++
Sbjct: 205 TVSVNDRNYNTIYRIVKKLLTQKIENKHGDLVEPIFTLACDLNGENIDTVISNPYNVVLV 264

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK----------REQSLSFLEFNY 176
           NN      +   + L  +    SV RMLS +S++SRL+          R+ ++   EF Y
Sbjct: 265 NNRDLYDKLSLTEYLTTVARHMSVGRMLSRDSIKSRLQIADEGSNNSVRQANMDLAEFIY 324

Query: 177 MILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK--TPKLFALTSPLLTTASG 234
           M LQA DF+ ++  ++  +Q+GGSDQ GNI+ GI+LG  L   +  L+ +T+PLL T +G
Sbjct: 325 MSLQATDFIHVSSMFNAVIQVGGSDQMGNIMSGIELGRSLGALSKTLYGITTPLLQTRTG 384

Query: 235 TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE 294
            K+ K+ +  +      T   + W ++RN+DD  V  + K LT +P+  I++        
Sbjct: 385 EKLSKSNNEDLLRINTDTPALSLWSHFRNVDDKAVRCYLKWLTKVPLDTIEKTMNNH--- 441

Query: 295 INEAKKI------------IATEITTMVHGREEAEKAATAAM----------------EC 326
           +N+AK              +A E+TT + G E  +      +                + 
Sbjct: 442 VNDAKVRLHRCKTKLSQILLANELTTAIFGEEYTKAIHKHWISGDITDLLAPKRSYISDE 501

Query: 327 FDMSIHSQH-MPTISISKDEVSRGMGLLTL--------IVKAGFATSTNEARRHLKSNAI 377
           FD  I     +P ++++ +++ +G+    +        +V      +    RR ++    
Sbjct: 502 FDSLITFIDCVPQLNLNVNQLMQGIPFGDIMDNLRKQMLVSGRLYNN----RRAIREGTC 557

Query: 378 KINNSIISNEKLQIKLQDFD--------STGNIKLSFGKKN-HIIC 414
           +IN  ++   + ++  +D          S   I + +GK+  + I 
Sbjct: 558 RINGVVVKQPEYRVTEKDLLTVSCEDGRSLNYIAIQYGKRQLYFIL 603


>gi|304407892|ref|ZP_07389542.1| Tyrosine--tRNA ligase [Paenibacillus curdlanolyticus YK9]
 gi|304342911|gb|EFM08755.1| Tyrosine--tRNA ligase [Paenibacillus curdlanolyticus YK9]
          Length = 276

 Score =  252 bits (644), Expect = 9e-65,   Method: Composition-based stats.
 Identities = 73/286 (25%), Positives = 127/286 (44%), Gaps = 19/286 (6%)

Query: 135 IKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCR 194
           + + D+L E+ S  +V RML  +    R    Q +   EF Y ++QAYD V L  +    
Sbjct: 1   MNFQDVL-ELASKLTVARMLERDDFAKRYGNSQPIHIHEFFYPLMQAYDSVSLESD---- 55

Query: 195 LQMGGSDQWGNIICGIDLGERLKTPK-LFALTSPLLTTASG-TKMGKTLSGAIWLNKEMT 252
           +++GG+DQ  NI+ G  L     +     A+  PLL    G  KM K+L   I +N+E  
Sbjct: 56  IEIGGTDQTFNILMGRTLQGAFGSKDGQVAILMPLLEGLDGVQKMSKSLGNYIGINEE-- 113

Query: 253 SPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAKKIIATEITTM 309
            P   +    +I D  ++ + +  T++ + E+ ++ +          + K  +A  +  M
Sbjct: 114 -PNEIFGKTMSIPDELMLKYYELSTSITIEELQQLKQDLQAGDVHPRDVKVQLAKHLVRM 172

Query: 310 VHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTNEA 368
            HG + AE+A       F        +    +  + +  G + +  L+V  GFA ST+EA
Sbjct: 173 YHGEQAAEQAEQHFNLVFQKRALPDQIDEAHVGGELLEEGRISISKLLVTLGFAASTSEA 232

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           RR +   A+KIN   + +    + +Q  D      +  GK+     
Sbjct: 233 RRSVAQGAVKINEVKLLDPNESVVIQSGD-----IVQAGKRKFAKI 273


>gi|16904661|dbj|BAB71952.1| putative tyrosine-tRNA synthetase [Rhodococcus sp. T09]
          Length = 232

 Score =  248 bits (635), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 72/229 (31%), Positives = 113/229 (49%), Gaps = 11/229 (4%)

Query: 199 GSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT-LSGAIWLNKEMTSPYNF 257
           GSDQWGNII G++L  R+    +  LT PL+T+A G K GK+   G++WL++EMTSPY +
Sbjct: 1   GSDQWGNIIAGVELNRRIDAESVHGLTVPLVTSADGKKFGKSTGGGSLWLDQEMTSPYAW 60

Query: 258 WQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKIIATEITTMVHGREE 315
           +QY+ N  DADV+ + +  T L   E+     A  +     EA++ +A E+TT+VHG   
Sbjct: 61  YQYFVNTGDADVIKYLRWFTFLTAEELAELETATAERPHAREAQRRLAAEMTTLVHGEAN 120

Query: 316 AEKAATAAMECFDMSIHSQ--------HMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
                 A+   F  +             +   S+++       G++ L+V +G   S   
Sbjct: 121 TRAVELASQALFGRAELQDLDEPTLGAALREASVAELAPGEPAGIVDLLVLSGLCESKGA 180

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           ARR +K     +NN  IS+E       D      + +  GK+N     +
Sbjct: 181 ARRTVKEGGASVNNQKISSEDWTPAPTDLLHGTWLVIRRGKRNFAGIKV 229


>gi|302657965|ref|XP_003020693.1| hypothetical protein TRV_05219 [Trichophyton verrucosum HKI 0517]
 gi|291184550|gb|EFE40075.1| hypothetical protein TRV_05219 [Trichophyton verrucosum HKI 0517]
          Length = 475

 Score =  248 bits (634), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 95/369 (25%), Positives = 149/369 (40%), Gaps = 68/369 (18%)

Query: 115 KYGTGKTDALML---NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSF 171
           K+G     A      NN TW      ID+L  +G    +  ML  E V++RL+    +SF
Sbjct: 18  KHGYSWEWAWRRALENNNTWWNKETLIDVLGTLGQHARIGTMLGREPVKTRLESGSGMSF 77

Query: 172 LEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL------KTPK----- 220
            EF Y I+QA+D+  L +     +Q+GGSDQ GNI  GID  +++      +T       
Sbjct: 78  TEFCYPIMQAWDWWHLYQK-GVMIQVGGSDQSGNIQLGIDTIKQVLKTSPIETKPGEDPE 136

Query: 221 ---LFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT 277
               F LT PLLTT++G K+GK+   +IWL+K+MTS Y+ +QY+    D D+    K  T
Sbjct: 137 LSMPFGLTVPLLTTSTGEKIGKSAGNSIWLDKDMTSTYDLYQYFMRQPDQDMERLLKMFT 196

Query: 278 TLPMSEIDRMAKLQGKEI--NEAKKIIATEITTMVHGREEAEKAATAAMECFDMS----- 330
            LP S I  + +   K      A+  +A E   +VHG +EAE+A+ A    F        
Sbjct: 197 FLPTSRIPEIIEEHNKAPSRRVAQHTLAQEFVELVHGPKEAEEASKAHKAIFQPQGSTST 256

Query: 331 --------IHSQHMPT---------------ISISKDEVSRGMGLL------TLIVKAGF 361
                   +    +P                 +     +     L+       ++  AG 
Sbjct: 257 KSDAKSIPLLPSGIPEYINAGVNKKAPQMNAFTAPTHHLVLPRSLVVGQYFHKILYSAGM 316

Query: 362 ATSTNEARRHLKSNAIKI-----NNSIISNE---------KLQIKLQDFDSTGNIKLSFG 407
            +S  E  R + +N   +         + +             +  +       + L  G
Sbjct: 317 VSSKQEGHRIIVNNGASVGCMPSGAEQMGDALSYVPLRTWPADVTEKFLIDGSLLILRIG 376

Query: 408 KKNHIICHL 416
           K    I  +
Sbjct: 377 KWRVKIIKV 385


>gi|302502897|ref|XP_003013409.1| hypothetical protein ARB_00227 [Arthroderma benhamiae CBS 112371]
 gi|291176973|gb|EFE32769.1| hypothetical protein ARB_00227 [Arthroderma benhamiae CBS 112371]
          Length = 475

 Score =  248 bits (634), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 95/369 (25%), Positives = 149/369 (40%), Gaps = 68/369 (18%)

Query: 115 KYGTGKTDALML---NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSF 171
           K+G     A      NN TW      ID+L  +G    +  ML  E V++RL+    +SF
Sbjct: 18  KHGYSWEWAWRRALENNNTWWNKETLIDVLGTLGQHARIGTMLGREPVKTRLESGSGMSF 77

Query: 172 LEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL------KTPK----- 220
            EF Y I+QA+D+  L +     +Q+GGSDQ GNI  GID  +++      +T       
Sbjct: 78  TEFCYPIMQAWDWWHLYQK-GVMIQVGGSDQSGNIQFGIDTIKQVLKTSPIETKPGEDPE 136

Query: 221 ---LFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT 277
               F LT PLLTT++G K+GK+   +IWL+K+MTS Y+ +QY+    D D+    K  T
Sbjct: 137 LSMPFGLTVPLLTTSTGEKIGKSAGNSIWLDKDMTSTYDLYQYFMRQPDQDMERLLKMFT 196

Query: 278 TLPMSEIDRMAKLQGKEI--NEAKKIIATEITTMVHGREEAEKAATAAMECFDMS----- 330
            LP S I  + +   K      A+  +A E   +VHG +EAE+A+ A    F        
Sbjct: 197 FLPTSRIPEIIEEHNKAPSRRVAQHTLAQEFVELVHGPKEAEEASKAHKAIFQPQGSTST 256

Query: 331 --------IHSQHMPT---------------ISISKDEVSRGMGLL------TLIVKAGF 361
                   +    +P                 +     +     L+       ++  AG 
Sbjct: 257 KSDAKSIPLLPSGIPEFINAGVNKKAPQMNAFTAPTHHLVLPRSLVVGQYFHKILYSAGM 316

Query: 362 ATSTNEARRHLKSNAIKI-----NNSIISNE---------KLQIKLQDFDSTGNIKLSFG 407
            +S  E  R + +N   +         + +             +  +       + L  G
Sbjct: 317 VSSKQEGHRIIVNNGASVGCMPSGAEQMGDALSYVPLRTWPADVTEKFLIDGSLLILRIG 376

Query: 408 KKNHIICHL 416
           K    I  +
Sbjct: 377 KWRVKIIKV 385


>gi|23007297|ref|ZP_00049230.1| COG0162: Tyrosyl-tRNA synthetase [Magnetospirillum magnetotacticum
           MS-1]
          Length = 233

 Score =  248 bits (633), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 117/212 (55%), Positives = 153/212 (72%), Gaps = 2/212 (0%)

Query: 165 REQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFAL 224
           R+Q LSFL FNYMILQ+Y FVEL + +  RLQMGGSDQWGNI+ GIDLG R+ TP+L+ L
Sbjct: 2   RDQYLSFLVFNYMILQSYVFVELNRRFGTRLQMGGSDQWGNIVNGIDLGRRMGTPQLYGL 61

Query: 225 TSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI 284
           T PLLTTASG KMGKT +GA+WL+  M S Y++WQ+WRN +DADV  F K  T LP+SEI
Sbjct: 62  TCPLLTTASGAKMGKTAAGAVWLDAGMLSAYDYWQFWRNTEDADVARFLKLFTLLPLSEI 121

Query: 285 DRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKD 344
           DR+A LQG EINEAK I+ATE T ++HG E AE+AA  A + F     +  +P++++ + 
Sbjct: 122 DRLAALQGAEINEAKAILATEATRLMHGTEAAEQAAETARKTFVEGTLAASLPSVAVPRS 181

Query: 345 EVSRGMGLLTLI--VKAGFATSTNEARRHLKS 374
            +  G+G+LT      A    ST+EARR +++
Sbjct: 182 VLEAGLGVLTAFGPEHAKLVPSTSEARRQIRA 213


>gi|145519105|ref|XP_001445419.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124412874|emb|CAK78022.1| unnamed protein product [Paramecium tetraurelia]
          Length = 395

 Score =  247 bits (632), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 93/330 (28%), Positives = 155/330 (46%), Gaps = 21/330 (6%)

Query: 89  ESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFF 148
           E R+      I EN+EKI+    S  +         +L+N  +    K ID + ++G  F
Sbjct: 70  EERKEPDLVVIHENLEKIRKQLESIGQPL------QILDNMDFYRETKLIDFVSKVGRQF 123

Query: 149 SVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNII 207
            +N +L+ + +  RL      LS  EF Y ILQ+YDF  L + YDC LQ+GGSDQWGNI 
Sbjct: 124 RMNSLLNKDHINKRLNSGDDGLSLTEFFYTILQSYDFAYLNEKYDCTLQIGGSDQWGNIT 183

Query: 208 CGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDA 267
            G D  ++    +++ +T+PLLT  +G K GK+   A++L+   +S +N  QY  N+ D 
Sbjct: 184 NGCDFVKKEYKKQVYGITTPLLTDKNGQKFGKSEGNALFLD--ASSKHNMKQYLLNLADD 241

Query: 268 DVVSFAKRLTTLPMSEIDRMAKLQG--KEINEAKKIIATEITTMVHGREEAEKAATAAME 325
            +  F   LT L   +ID + +      E   A+K ++ E+  M++G E + +       
Sbjct: 242 SMRDFLLMLTFLKEEQIDSVMEQHKQSPEKRVAQKCLSDELLRMIYGEESSAEKNQILYG 301

Query: 326 CFDMSIHSQHMPTISISKDEVSRGMGL-----LTLI-VKAGFATSTNEARRHLKSNAIKI 379
                + +          +E+ + + +       L+ V     +S +E RR L+   I I
Sbjct: 302 LRRDRLMNMSAQEFDRLAEEIDKDVVIRVAKQTQLMEVLLKLRSSKSEIRRLLQQGGILI 361

Query: 380 NNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
           N+  +     Q++         + L  GK+
Sbjct: 362 NDQKVE----QLEQAQLLHDKYMLLRIGKR 387


>gi|317478181|ref|ZP_07937350.1| tRNA synthetase class I [Bacteroides sp. 4_1_36]
 gi|316905664|gb|EFV27449.1| tRNA synthetase class I [Bacteroides sp. 4_1_36]
          Length = 193

 Score =  247 bits (631), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 76/194 (39%), Positives = 115/194 (59%), Gaps = 5/194 (2%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +F+  L  RG +H +    E   L ++  VTAYIG+D TA SLH GHL  +M+L   Q+ 
Sbjct: 2   NFVEELRWRGMLHDMMPGTE--ELLAKEQVTAYIGFDPTADSLHIGHLCSVMILRHFQRC 59

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG-TGKTDALM 125
           GHKP++L+GG T +IGDPS +   R ++  + +Q N+  +K   S F+ +       A +
Sbjct: 60  GHKPLALIGGATGMIGDPSGKSAERNLLTEETLQRNLAGMKAQLSKFLDFDSDAPNRAEL 119

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE--QSLSFLEFNYMILQAYD 183
           +NN  W+ +  ++D  RE+G   +VN M++ +SV+ RL  E    LSF EF Y +LQ YD
Sbjct: 120 VNNYDWMKNFTFLDFAREVGKHITVNYMMAKDSVKKRLNGEARDGLSFTEFTYQLLQGYD 179

Query: 184 FVELAKNYDCRLQM 197
           F+ L +   C+LQM
Sbjct: 180 FLHLYETKGCKLQM 193


>gi|170587925|ref|XP_001898724.1| tyrosyl-tRNA synthetase family protein [Brugia malayi]
 gi|158592937|gb|EDP31532.1| tyrosyl-tRNA synthetase family protein [Brugia malayi]
          Length = 429

 Score =  247 bits (630), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 118/435 (27%), Positives = 186/435 (42%), Gaps = 71/435 (16%)

Query: 8   FLSILSERGFIHQISNPRELD----ILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           F + L++R  I   S+P  L      + S      Y G+D TA SLH GHL  L  LF  
Sbjct: 42  FCADLAKRNLIS-TSHPPNLSSDDFKIVSTLPDVIYAGFDPTAESLHIGHLLILTNLFRA 100

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
                  I+L+GG T+ +GDPS     R ++   EI + + KI     S I++       
Sbjct: 101 ALHRCHAIALIGGATAHVGDPSGHITDRNIVPGHEIDQYVRKINLQLMSSIRFL------ 154

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
                              E+   F +  ML    V+SR++    LS  EF Y ILQ+YD
Sbjct: 155 -------------------EVCRDFRLGDMLRLGMVKSRMRDGSGLSCTEFLYQILQSYD 195

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT--L 241
           +  L+++Y+C  Q+GG+DQ G+   G D  +R       ++  PLLT A G K+ KT   
Sbjct: 196 WYRLSRDYNCHFQIGGNDQLGHFDAGYDYIKRKTGKISASICLPLLTDAQGKKLSKTSKE 255

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AK 299
              IWL++  TSP+ F+Q+                +   + EI+ + +     + +  A+
Sbjct: 256 HSNIWLDERKTSPFTFYQH---------------FSLQTIEEIEEIEREHQANLGKWIAQ 300

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHS-QHMPTISISKDEVSRGMGLLTLI-- 356
           + +A E+T +VHG    + A   +   F  S+   + MPT  I  +E      +  L   
Sbjct: 301 EKLAEELTKLVHGSNGLKIAKQCSKMLFSDSLSELRKMPTSFI--EEQFGTASVQQLFRS 358

Query: 357 -----------VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF-DSTGNIKL 404
                      V +G  +S N     +K+ A+K+N    +N    I       +  NI L
Sbjct: 359 RFSTIGELADKVHSGDGSSIN----KMKTGALKLNGIQFTNPDEVIDFDKICLNGKNITL 414

Query: 405 SF-GKKNHIICHLCG 418
              GK+ + +    G
Sbjct: 415 VCWGKRKYHLIKWIG 429


>gi|258578085|ref|XP_002543224.1| tyrosyl-tRNA synthetase [Uncinocarpus reesii 1704]
 gi|237903490|gb|EEP77891.1| tyrosyl-tRNA synthetase [Uncinocarpus reesii 1704]
          Length = 458

 Score =  247 bits (630), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 94/361 (26%), Positives = 155/361 (42%), Gaps = 59/361 (16%)

Query: 115 KYGTGKTDALML---NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSF 171
           K+G     A      NN TW     + D++  +G    +  ML  ++V+SRL+    +S 
Sbjct: 18  KHGFEYEWAWRRVLENNNTWWNKQTFADVMTTLGQAVRLGPMLGRDNVKSRLEDGSGMSL 77

Query: 172 LEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKL---------- 221
            EF Y I+QA+DF  L + +  ++Q+GGSDQ+GNI+ GID  + +               
Sbjct: 78  AEFCYPIMQAWDFWYLFQ-HGTQIQVGGSDQYGNILFGIDAIKGILKNNPNSEFAPKPGE 136

Query: 222 -------FALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAK 274
                    +T+PLLTT+SG K GK+   AIWL+K+MTS Y+ +QY+  + D+DV  + K
Sbjct: 137 DPDLVNPIGITTPLLTTSSGEKFGKSAGNAIWLDKDMTSCYDLYQYFVRLPDSDVERYLK 196

Query: 275 RLTTLPMSEIDRMAKLQGKEI--NEAKKIIATEITTMVHGREEAEKAAT----AAMECFD 328
             T +P SEI  + +   +      A+  +A E   ++HG  EA+KAA       +  F 
Sbjct: 197 LFTFIPTSEIKTLMEKHNENPSKRLAQHKLAVEFVEIIHGSNEAQKAARDHALIFVSKFA 256

Query: 329 MSIHSQHMPT------------ISISKDEVSRGMGLL------TLIVKAGFATSTNEARR 370
                +  P               +    V+    L+       ++  AG  +S  E  R
Sbjct: 257 DKTGDKAAPDSEDEPRQQKLHMFDMPSPHVTLPRSLIYNQYFHKVLWSAGLVSSKAEGFR 316

Query: 371 HLKSNAIKINNSIISNEKL--------------QIKLQDFDSTGNIKLSFGKKNHIICHL 416
            + +N + + +   S + +               I  +       + L  GK    I  +
Sbjct: 317 LIVNNGVHVGSQADSKQSMGDAISYVPVKTWPPNITEKFIIDDSLLILKVGKWKVKIIKV 376

Query: 417 C 417
            
Sbjct: 377 V 377


>gi|67522505|ref|XP_659313.1| hypothetical protein AN1709.2 [Aspergillus nidulans FGSC A4]
 gi|40745673|gb|EAA64829.1| hypothetical protein AN1709.2 [Aspergillus nidulans FGSC A4]
 gi|259487050|tpe|CBF85411.1| TPA: tyrosyl-tRNA synthetase, mitochondrial precursor
           (tyrosine--tRNA ligase) (tyrrs) (AFU_orthologue;
           AFUA_4G08320) [Aspergillus nidulans FGSC A4]
          Length = 427

 Score =  247 bits (630), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 85/366 (23%), Positives = 153/366 (41%), Gaps = 77/366 (21%)

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
           NN  W      +++LR++G++  +  ML  ++V++R++R   +SF EF Y ++QA+D+  
Sbjct: 36  NNNVWWNKTPLLEVLRDLGAYIRIGPMLGRDTVKNRMERGDGMSFAEFTYPLMQAWDWWM 95

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERL---------------KTPKLFALTSPLLTT 231
           L KN  C++Q+GGSDQ+GNI+ G+   + +                  K    T+PLLTT
Sbjct: 96  LFKN-GCQVQVGGSDQYGNILFGVGAVKTISKNTVLQEDNNPLSDDLDKPIGFTTPLLTT 154

Query: 232 ASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ 291
           +SG K GK+   AIWL+K+MTS +  +Q++    D  V  + K  T LP+ EI ++ + Q
Sbjct: 155 SSGEKFGKSAGNAIWLDKDMTSTFELYQFFVRTPDDAVERYLKMFTFLPIPEISKIMEEQ 214

Query: 292 GKEI--NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPT----------- 338
            ++     A+  +A E   ++HG++EA+  +    + F     +   PT           
Sbjct: 215 NQDPSRRVAQHALAYEFVELIHGKDEADAVSMQHRQLFRPRTSTAE-PTPPPRTASPGNP 273

Query: 339 ----------------------ISISKDEVSRGMGLL------TLIVKAGFATSTNEARR 370
                                  ++    V+    L+       ++  AG   S +E +R
Sbjct: 274 KSSLSGFVNPQSGNPHAPQTNFANMPSARVTLPKSLVYDKTFSKVLWSAGLVASKSEGQR 333

Query: 371 HLKSNAIKIN---NSI----------------ISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
            + +N   +                       I         +       + L  GK   
Sbjct: 334 IINNNGAYVGSRPGVKKNEPGGGMPDDLTFTPIKTWNASKTQEFIIDGDLLILKLGKWKM 393

Query: 412 IICHLC 417
            +  + 
Sbjct: 394 KLVSIV 399


>gi|256089206|ref|XP_002580705.1| tyrosyl-tRNA synthetase [Schistosoma mansoni]
 gi|238666308|emb|CAZ36944.1| tyrosyl-tRNA synthetase, putative [Schistosoma mansoni]
          Length = 481

 Score =  245 bits (625), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 96/349 (27%), Positives = 166/349 (47%), Gaps = 27/349 (7%)

Query: 21  ISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSI 80
           IS+ + L    +    + Y G+D T  SL  G+L  +  L     +G   ++++GG T I
Sbjct: 18  ISSEKHLLDFETTRNFSVYAGFDPTCDSLQLGNLVAVCGLLRCHLSGKDIVAVVGGSTGI 77

Query: 81  IGDPSFRDESRRMMRSQE-------IQENIEKIKGIFSSFI----KYGTGKTDALMLNNE 129
           +GDPS R + R      +       I+ +++KI   + + I              ++NN 
Sbjct: 78  LGDPSGRIKKRDYQSLGQYASNSTLIEHSLDKIIYNYWTHIVPALPISGKLGSVHVVNNS 137

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
            WL   K +D+  E+   F ++ +L  ESV+ R++   ++   EF Y I+QA DF+ L +
Sbjct: 138 DWLTHKKVMDVSCEVLPHFKLSELLEKESVKIRMESGNTMDLGEFFYPIVQAIDFLYLHE 197

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA----- 244
            ++C +Q+GG DQ GNI CG++L  R    + F LT PLLTT  G K+GK++S +     
Sbjct: 198 KFNCYMQVGGHDQIGNITCGLNLIYRKLGRRAFGLTVPLLTTPDGQKLGKSVSNSECGMD 257

Query: 245 -IWLNKEMTSPYNFWQYWRNIDDADV-VSFAKRLTTLPMSEIDRMAKLQGKEINEAKKII 302
            IWL  +   PYNF+Q   N+ D+ +     ++LT     EID++           K+ +
Sbjct: 258 TIWLMSKKLKPYNFYQKILNLPDSIISDKLVRQLTFFGPDEIDQLLTDH-------KEKL 310

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMG 351
               T + +  + +E A         ++    ++P    S + +   + 
Sbjct: 311 V--STFLAYALQASELATRIFFPMSSVNCSDDNLPLDKSSMEIIQNELN 357


>gi|317478183|ref|ZP_07937351.1| tyrosyl-tRNA synthetase [Bacteroides sp. 4_1_36]
 gi|316905635|gb|EFV27421.1| tyrosyl-tRNA synthetase [Bacteroides sp. 4_1_36]
          Length = 235

 Score =  241 bits (615), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 74/232 (31%), Positives = 109/232 (46%), Gaps = 17/232 (7%)

Query: 200 SDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQ 259
           SDQWGNI  G +L  R    ++FALTSPL+T A G K GKT SG IWL+   TSPY F+Q
Sbjct: 1   SDQWGNITTGAELIRRTNGGEVFALTSPLITKADGGKFGKTESGNIWLDPRYTSPYKFYQ 60

Query: 260 YWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKKIIATEITTMVHGREEAE 317
           +W N+ D D   + K  T L   EID +         +   +K +A E+T MVH  E+  
Sbjct: 61  FWLNVSDEDAKRYIKIFTALSKEEIDALTAEHDAAPHLRVLQKCLAKEVTIMVHSEEDYN 120

Query: 318 KAATAAMECFDMSIHS--------------QHMPTISISKDEVSRGMGLLTLIVK-AGFA 362
            A  A+   F  +                 + +P   IS+D ++ G+  + L V  A   
Sbjct: 121 AAVDASNILFGNATSDALKKLDEDTLLAVFEGVPQFEISRDALAAGVKAVDLFVDNAAVF 180

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            S  E R+ ++   + +N   ++     I   D      + +  GKKN+ + 
Sbjct: 181 ASKGEMRKLVQGGGVSLNKEKLAAFDQVITTADLLDEKYLLVQRGKKNYYLI 232


>gi|237756624|ref|ZP_04585139.1| tyrosyl-tRNA synthetase [Sulfurihydrogenibium yellowstonense SS-5]
 gi|237691222|gb|EEP60315.1| tyrosyl-tRNA synthetase [Sulfurihydrogenibium yellowstonense SS-5]
          Length = 251

 Score =  237 bits (606), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 63/262 (24%), Positives = 107/262 (40%), Gaps = 19/262 (7%)

Query: 158 SVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK 217
             + R K    +S  EF Y +LQAYD V +  +    +++GGSDQ  N++ G D+ +   
Sbjct: 1   DFKKRFKENIPISIHEFIYPLLQAYDSVAIKAD----VELGGSDQRFNLLIGRDIQKEYG 56

Query: 218 TP-KLFALTSPLLTTASGTK-MGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKR 275
                 A+  PLL    G K M K+    I + +    P   +    +I D  +  + + 
Sbjct: 57  IESPQVAILLPLLVGTDGVKKMSKSYGNYIGITQP---PEEMFGKIMSISDELMWQYWEL 113

Query: 276 LTTLPMSEIDRMAKLQGK---EINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIH 332
           LT L + EI+++ +   K      E KK +   I    H +E+A KA     +       
Sbjct: 114 LTDLTLDEINKLKEDVQKGILHPMEVKKQLGMYIVERFHSKEDAIKAREHFEKVHSKKEI 173

Query: 333 SQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
            + +P       E+     L  +I     A +  EA+R +K   +K+N   I++   +  
Sbjct: 174 PEEIPVFK--ASEIGTETELFEIIFNLKLAETKAEAKRLIKQGGVKVNGEKITDPMYKPD 231

Query: 393 LQDFDSTGNIKLSFGKKNHIIC 414
           L     T    +  GK+     
Sbjct: 232 L-----TKEFIIQVGKRKFAKI 248


>gi|94502430|ref|ZP_01308871.1| tyrosyl-tRNA synthetase [Candidatus Sulcia muelleri str. Hc
           (Homalodisca coagulata)]
 gi|94451013|gb|EAT13997.1| tyrosyl-tRNA synthetase [Candidatus Sulcia muelleri str. Hc
           (Homalodisca coagulata)]
          Length = 256

 Score =  237 bits (604), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 88/254 (34%), Positives = 135/254 (53%), Gaps = 17/254 (6%)

Query: 133 CSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYD 192
               +I+  R+IG +F++N ML+ +S++ R+    S+SF EF Y +LQAYDF+ L K  +
Sbjct: 3   KKKLFIEFARDIGKYFTINYMLTKDSIKRRISNNNSISFTEFTYQLLQAYDFIYLYKEKN 62

Query: 193 CRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG-AIWLNKEM 251
           C LQ+GGSDQWGNI  GI+L  +    K+  LT PL+T   G+K GKT +G  IW++  +
Sbjct: 63  CSLQIGGSDQWGNITSGIELIRKKLGVKVNGLTFPLITKLDGSKFGKTENGENIWIDPNL 122

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIATEITTM 309
           TSPY F+Q+W NI D     + K  T L   EI  +      +      +K +A+EIT  
Sbjct: 123 TSPYEFYQFWINISDEQAKKYIKIYTFLKKEEIKEIIFYHENDPKLKLIQKKLASEITIF 182

Query: 310 VHGREEAEKAATAAMECFDMS------------IHSQHMPTISISKDEVSRGMGLLTLIV 357
           +HG++  EK    +   F+                 +++P   I     +  + ++ L+V
Sbjct: 183 IHGKKTFEKIKFISNILFNKKKIINEINKNYIIFIYKNIPHKKIYIYH-NFNIPIIDLLV 241

Query: 358 -KAGFATSTNEARR 370
            K+ F  S  EA R
Sbjct: 242 NKSKFLKSKKEAIR 255


>gi|289676245|ref|ZP_06497135.1| tyrosyl-tRNA synthetase [Pseudomonas syringae pv. syringae FF5]
          Length = 215

 Score =  230 bits (588), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 59/215 (27%), Positives = 98/215 (45%), Gaps = 9/215 (4%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG    +     ++ L     +    G+D TA  LH GH   +  L   Q  GH+ I
Sbjct: 10  LIKRGADELLVEAELVEKLKRGQPLRIKAGFDPTAPDLHLGHTVLINKLRQFQDLGHQII 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T +IGDPS +  +R  +  +++ +  E  K      +     +    +  N TW
Sbjct: 70  FLIGDFTGMIGDPSGKSATRPPLTREQVLDYAETYKSQVFKILDPAKTE----VAFNSTW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +  +   D +R + S ++V RML  +    R K  QS++  EF Y ++Q YD V L  + 
Sbjct: 126 MDQLSPADFIR-LSSQYTVARMLERDDFDKRYKSNQSIAIHEFLYPLVQGYDSVALKAD- 183

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTS 226
              +++GG+DQ  N++ G +L           LT 
Sbjct: 184 ---VELGGTDQKFNLLMGRELQRAYGQEPQCLLTL 215


>gi|213422302|ref|ZP_03355368.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E01-6750]
          Length = 164

 Score =  228 bits (581), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 81/163 (49%), Positives = 107/163 (65%), Gaps = 1/163 (0%)

Query: 112 SFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLS 170
            F+ +  G+  A+  NN  W  S+  +  LR+IG  FSVN+M++ E+V+ RL R+ Q +S
Sbjct: 2   PFLDFDCGENSAIAANNYDWFGSMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDQGIS 61

Query: 171 FLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLT 230
           F EF+Y +LQ YDF  L K +   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL+T
Sbjct: 62  FTEFSYNLLQGYDFACLNKLHGVALQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLIT 121

Query: 231 TASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFA 273
            A GTK GKT  GA+WL+ + TSPY F+Q+W N  DADV  F 
Sbjct: 122 KADGTKFGKTEGGAVWLDPKKTSPYKFYQFWINTADADVYRFL 164


>gi|270011290|gb|EFA07738.1| hypothetical protein TcasGA2_TC002218 [Tribolium castaneum]
          Length = 254

 Score =  227 bits (580), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 79/234 (33%), Positives = 124/234 (52%), Gaps = 11/234 (4%)

Query: 4   FKSDFLSILSERGFIHQISNPRE---LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           + S  L  L ERG    I        +  L +      Y G+D TA SLH G+L  L+ L
Sbjct: 19  YSSRNLLKLKERGMYQDIFPDTATNTVTDLLNAAPQRVYAGFDPTADSLHIGNLLVLINL 78

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFS----SFIKY 116
              Q+ GH+PI+L+GG T+ IGDPS +   R  + S  + EN+  I+        +  KY
Sbjct: 79  IHWQRGGHQPIALIGGATAKIGDPSGKTSEREKLASAFVDENVIGIRNNIETLFYNHEKY 138

Query: 117 GTGKTDA----LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFL 172
              K       +++NNE+W   +  IDL+   G +  +  +LS  SV++RL+    +SF 
Sbjct: 139 LWKKKGKLAPLIIVNNESWYSKMSPIDLIGGAGRYLRMGTLLSRTSVQTRLQSPAGMSFT 198

Query: 173 EFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTS 226
           EF+Y + QAYD++ L + Y+C  Q+GG+DQ GNI+ G +L  +    +++  T+
Sbjct: 199 EFSYQLFQAYDWLHLFQKYNCSFQIGGNDQMGNIMSGHELISKTCDKQVYGKTT 252


>gi|84998594|ref|XP_954018.1| tyrosyl-tRNA synthetase [Theileria annulata]
 gi|65305016|emb|CAI73341.1| tyrosyl-tRNA synthetase, putative [Theileria annulata]
          Length = 520

 Score =  226 bits (577), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 109/519 (21%), Positives = 204/519 (39%), Gaps = 121/519 (23%)

Query: 13  SERGFIHQISNPRELDILCSQGVV---------TAYIGYDLTASSLHAGHLTQLMLLFWL 63
            ER  I Q ++  +LD L +             + Y G D T   +H G L QL+LL   
Sbjct: 1   MERSMISQSTDFVKLDQLLTSYQTQNFNNSMYNSIYYGIDCTNDFIHEGTLFQLLLLRRF 60

Query: 64  QKTGHKPISLMGGGTSIIGDPSFR------------------DESRRMMRSQEIQENIEK 105
                  + ++GGGT+++GDPS++                  D+S     +++  E I  
Sbjct: 61  LSEKFNVVLVIGGGTTLVGDPSYKLRRNRNDKFYFSNFVLNKDKSEFDTTNEQSIEQIAT 120

Query: 106 IKGIFSSFIKYGTGKTD-----------------------------ALMLNNETWLCSIK 136
                   I   +   +                               ++NN      + 
Sbjct: 121 KILSLPIKIDNTSPDNNNNYALPKVVRVSDLSTDLDVSSEMCNPYRVFIVNNRDIYNRVN 180

Query: 137 YIDLLREIGSFFSVNRMLSFESVRSR--------LKREQSLSFLEFNYMILQAYDFVELA 188
            ++ L  +    +V RMLS + ++ R         K+  ++   E  YM LQA DFV LA
Sbjct: 181 LMEYLETVARNMNVGRMLSRDCIKIRTVDKDGTGYKKSINMDLSELMYMSLQAMDFVYLA 240

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
           +N++C++Q+GG+DQ GNII GI+L   L    +F +T+PLL    G K+ KT S      
Sbjct: 241 ENFNCKIQLGGNDQLGNIISGIELASSLGIGNIFGITTPLLKDKFGEKISKTGSNCFLKI 300

Query: 249 KEMTSPYNFWQYWRNIDDADVVS--------------------FAKRLTTLPMSEIDRMA 288
               SP+ FW ++R++DD+ +                      + K  T + + +I    
Sbjct: 301 TNKISPHEFWSHFRSVDDSVLEKYYHYLYSYIYIWPINNILYSYLKWFTDVSLDKIKETM 360

Query: 289 KLQGKEINEAKKIIATEITTMVHGREEAEKAATA-----------AMECFDMSI------ 331
                  N  K ++A E+T +++G +  E                 +  FD ++      
Sbjct: 361 AEH---YNSGKVLLADELTRLLYGNQMVELIHKFCMSKQFSELKPFLTNFDTNMEEFESF 417

Query: 332 --HSQHMPTISISKDEVSR-GMGLLTLIVKAGFATSTNEA-----RRHLKSNAIKINNSI 383
              S+ +P I+++  ++S+ G+ LL ++         + A     ++ +K    ++N ++
Sbjct: 418 INFSKAVPHINLTSQQLSKVGVKLLEVLDAVR-VPQFSNACFHSNKKFIKEGGCRVNGNV 476

Query: 384 ISNEKLQIKLQDF-------DSTGNIKLSFGKKN-HIIC 414
           +++    +   D        +    I +  G +  + + 
Sbjct: 477 VTDVNYTLTEDDVVKLTSEGNHYKYISIQMGNRRLYFLI 515


>gi|218678007|ref|ZP_03525904.1| tyrosyl-tRNA synthetase [Rhizobium etli CIAT 894]
          Length = 180

 Score =  226 bits (576), Expect = 7e-57,   Method: Composition-based stats.
 Identities = 85/177 (48%), Positives = 121/177 (68%)

Query: 239 KTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEA 298
           K+ SGA+WLN ++   Y+FWQYWRN +DADV  F K  TTLPM EI R++ L G E+NE 
Sbjct: 1   KSASGAVWLNADLLPVYDFWQYWRNTEDADVPRFLKLFTTLPMDEIARLSALGGSELNEV 60

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVK 358
           KKI+ATE+T ++HGR  AE AA  A + F+    S+++P++ I   E+  G+GLL+L+V+
Sbjct: 61  KKILATEVTAILHGRPAAELAAETARKTFEEGGLSENLPSVDIPATELDGGIGLLSLMVR 120

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           AG A S  EARRH++  A++IN+  +S+E+  I   +  + G IKLS GKK HI+  
Sbjct: 121 AGLAGSNGEARRHIQGGAVRINDEAVSDERRLIGSNEITADGVIKLSLGKKKHILIR 177


>gi|93359589|gb|ABF13323.1| tyrosyl-tRNA synthetase [Streptococcus vestibularis]
          Length = 206

 Score =  225 bits (575), Expect = 9e-57,   Method: Composition-based stats.
 Identities = 60/205 (29%), Positives = 102/205 (49%), Gaps = 15/205 (7%)

Query: 222 FALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPM 281
             +T PL+T ++G K GK+   A+WL+   T+PY  +Q+W N+ D D V F K  T L +
Sbjct: 3   HVITVPLITDSTGKKFGKSEGNAVWLDATKTTPYEMYQFWLNVMDDDAVRFLKIFTFLSL 62

Query: 282 SEIDRMAKL--QGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS------ 333
            EI+ + K   Q +    A+K++A E+ T+VHG+E  E+A     + F  ++ +      
Sbjct: 63  EEIEEIGKEFDQARHQRLAQKVLAREVVTLVHGKEAYEQAVHITEQLFAGNLKALSARDL 122

Query: 334 ----QHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKL 389
                 +PT  IS DE    + ++ L+V A  + S  +AR  +++ AI IN   + +   
Sbjct: 123 KVALNGVPTYEISADE---NLNIVELLVNAKISPSKRQAREDVQNGAIYINGERVQDLDY 179

Query: 390 QIKLQDFDSTGNIKLSFGKKNHIIC 414
            +   D        +  GKK + + 
Sbjct: 180 TLSDTDKIDNEITVIRRGKKKNFVL 204


>gi|93359602|gb|ABF13332.1| tyrosyl-tRNA synthetase [Streptococcus salivarius]
          Length = 208

 Score =  225 bits (574), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 60/209 (28%), Positives = 102/209 (48%), Gaps = 15/209 (7%)

Query: 218 TPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT 277
                 +T PL+T ++G K GK+   A+WL+   T+PY  +Q+W N+ D D V F K  T
Sbjct: 1   DKSGHVITVPLITDSTGKKFGKSEGNAVWLDATKTTPYEMYQFWLNVMDDDAVRFLKIFT 60

Query: 278 TLPMSEIDRMAKL--QGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS-- 333
            L + EI+ + K   Q +    A+K++A E+ T+VHG+E  E+A     + F  ++ +  
Sbjct: 61  FLSLEEIEEIGKEFDQARHQRLAQKVLAREVVTLVHGKEAYEQAVHITEQLFAGNLKALS 120

Query: 334 --------QHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIIS 385
                     +PT  IS DE    + ++ L+V A  + S  +AR  +++ AI IN   + 
Sbjct: 121 ARDLKVALNGVPTYEISADE---NLNIVELLVNAKISPSKRQAREDVQNGAIYINGERVQ 177

Query: 386 NEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           +    +   D        +  GKK + + 
Sbjct: 178 DLDYTLSDTDKIDNEITVIRRGKKKNFVL 206


>gi|283458441|ref|YP_003363066.1| tyrosyl-tRNA synthetase [Rothia mucilaginosa DY-18]
 gi|283134481|dbj|BAI65246.1| tyrosyl-tRNA synthetase [Rothia mucilaginosa DY-18]
          Length = 211

 Score =  222 bits (566), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 67/215 (31%), Positives = 104/215 (48%), Gaps = 17/215 (7%)

Query: 216 LKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKR 275
           ++   + A+ +PL+T + GTK GK+   AIWLN +M SPY F+Q+W N  DADV+   K 
Sbjct: 1   MEGKSVHAIGTPLITNSDGTKFGKSEGNAIWLNPQMCSPYAFYQFWLNTADADVLDRLKV 60

Query: 276 LTTLPMSEIDRMAKLQGKEI--NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS 333
            T L  +EI   A+   KE    EA+K +A  +T++VHG E  ++A  A+   F     +
Sbjct: 61  FTFLTRAEIAEFAEKVEKEPFKREAQKTLAYLVTSLVHGTEATDQAVAASEALFGKGDFA 120

Query: 334 -----------QHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNS 382
                        +P+  +  D +     +++++ + GFA S +EARR LK     +N  
Sbjct: 121 ALDEATLESVVAELPSAKLPADRL----DMISVLTELGFAKSNSEARRILKEGGASVNGV 176

Query: 383 IISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            +  E   I   D        +  GKKN     L 
Sbjct: 177 KVQGEDAAISKDDLLHGRFAMVRRGKKNQGAVELV 211


>gi|289812080|ref|ZP_06542709.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. AG3]
          Length = 160

 Score =  221 bits (564), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 67/157 (42%), Positives = 100/157 (63%), Gaps = 1/157 (0%)

Query: 29  ILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRD 88
              +QG +  Y G+D TA SLH GHL  L+ L   Q+ GHKP++L+GG T +IGDPSF+ 
Sbjct: 3   ERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQAGHKPVALVGGATGLIGDPSFKA 62

Query: 89  ESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFF 148
             R++   + +QE + KI+   + F+ +  G+  A+  NN  W  S+  +  LR+IG  F
Sbjct: 63  AERKLNTEETVQEWVAKIRKQVAPFLDFDCGENSAIAANNYDWFGSMNVLTFLRDIGKHF 122

Query: 149 SVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDF 184
           SVN+M++ E+V+ RL R +Q +SF EF+Y +LQ YDF
Sbjct: 123 SVNQMINKEAVKQRLNRDDQGISFTEFSYNLLQGYDF 159


>gi|149642027|ref|XP_001514884.1| PREDICTED: hypothetical protein [Ornithorhynchus anatinus]
          Length = 302

 Score =  219 bits (559), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 69/249 (27%), Positives = 113/249 (45%), Gaps = 13/249 (5%)

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK 239
           +A +   +   Y CR+Q+GG DQ GNI  G +   ++    +F +T PL+T+ +G K+GK
Sbjct: 50  EAPEVXVVDSRYGCRVQLGGHDQLGNIQSGYEFVRKVTGKDVFGITVPLITSTTGAKLGK 109

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NE 297
           +   A+WLN++ TSP+  +Q++    D  V  + K  T LP+ EID + K+  KE     
Sbjct: 110 SAGNAVWLNRDKTSPFELYQFFVRQQDDCVERYLKLFTFLPLPEIDHIMKMHAKEPEKRG 169

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIH----------SQHMPTISISKDEVS 347
            +K +A E+T  VHG E  E A       +  S+            +       S+  + 
Sbjct: 170 PQKRLAAEVTKFVHGPEGLESAKRCTQAIYHSSVDVLETMSDQELKELFREAPFSELVLD 229

Query: 348 RGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL-QDFDSTGNIKLSF 406
            G  ++    KA          R +    + IN+  +++ +  + L Q     G   L  
Sbjct: 230 PGTSVIDTCRKANAIPEGPRGYRMITDGGVSINHHQMTDPESVLVLGQHILRNGLSLLKV 289

Query: 407 GKKNHIICH 415
           GKKN  I  
Sbjct: 290 GKKNIYIIK 298


>gi|145635107|ref|ZP_01790813.1| tyrosyl-tRNA synthetase [Haemophilus influenzae PittAA]
 gi|145267715|gb|EDK07713.1| tyrosyl-tRNA synthetase [Haemophilus influenzae PittAA]
          Length = 220

 Score =  215 bits (549), Expect = 8e-54,   Method: Composition-based stats.
 Identities = 58/217 (26%), Positives = 101/217 (46%), Gaps = 11/217 (5%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M    +  L+ L  RG    +S    ++ L     +   +G D TA  +H GH   L  L
Sbjct: 1   MTNINT-VLAELK-RGTDEILSEADLIEKLKENRPLKVKLGADPTAPDIHLGHTVVLNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+   L+G  T ++GDPS ++ +R  +  +++  N E  K      +     K
Sbjct: 59  RQFQQLGHEVYFLIGDFTGMVGDPSGKNATRPPLSREDVLRNAETYKEQIYKILDPQKTK 118

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               ++ N  WL  +    ++R + S ++V RML  +  + R    Q ++  EF Y +LQ
Sbjct: 119 ----IVFNSEWLSKLGTEGMIR-LASNYTVARMLERDDFKKRFGNNQPIAIHEFIYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK 217
            YD V L  +    +++GG+DQ  N++ G +L +   
Sbjct: 174 GYDSVALDAD----VELGGTDQKFNLLVGRELQKSAG 206


>gi|325972882|ref|YP_004249946.1| tyrosyl-tRNA synthetase [Mycoplasma suis str. Illinois]
 gi|325989375|ref|YP_004249074.1| Tyrosyl-tRNA synthetase [Mycoplasma suis KI3806]
 gi|323574460|emb|CBZ40110.1| Tyrosyl-tRNA synthetase [Mycoplasma suis]
 gi|323651484|gb|ADX97566.1| tyrosyl-tRNA synthetase [Mycoplasma suis str. Illinois]
          Length = 358

 Score =  214 bits (545), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 96/373 (25%), Positives = 178/373 (47%), Gaps = 27/373 (7%)

Query: 57  LMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY 116
           +++L      G K + ++G  T+ IGD S+R E R+++ S  IQ N+E+I+  F      
Sbjct: 1   MLVLNKASDYGIKTVIILGDFTTKIGDASWRTEDRKILESSVIQSNLEQIREQFKVLC-- 58

Query: 117 GTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNY 176
                 + ++ N T+  +   I+++ ++   F ++ +LS + +  RL  + SL+  +  Y
Sbjct: 59  ----PKSEIVLNSTFYRNFS-IEMMSDLMKNFKLSTLLSKDFLSVRL-SQDSLTLRDAFY 112

Query: 177 MILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLLTTASGT 235
            +LQ++DF  LA + +  +QMGG DQWGNI  GI+  ++          T PLLT ++G 
Sbjct: 113 PVLQSFDFYNLAVDKNVTIQMGGQDQWGNITTGIEFIKKKDNSIPTGGFTIPLLTDSNGV 172

Query: 236 KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI 295
           K GK+    ++LN ++TSPY  +QY+ N+ D       +    L  SEID    +     
Sbjct: 173 KFGKSGKNTLFLNSKLTSPYKVYQYFWNLSDE---KLKELSIFLFDSEIDSYESMTP--- 226

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMS-------IHSQHMPTIS--ISKDEV 346
            E K  I  ++ + V+          A+   F  +          + +  +S  +   E 
Sbjct: 227 -ECKSKIIEKLFSGVYRDNSFRAIKKASELLFQKNSDIREKVFTEEDLKDLSSVLPFYET 285

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLK-SNAIKINNSIISNEKLQIKLQDFDSTGNIKLS 405
           S    + T++V  GF++S +E++R ++    +   + +  N K  +  +   S+    + 
Sbjct: 286 SGPTNISTILVNLGFSSSHSESKRLVELEKCVSCFSYVFKNHKEILDTK-LSSSSYFLIK 344

Query: 406 FGKKNHIICHLCG 418
            G+K + I H  G
Sbjct: 345 KGEKEYGIFHYSG 357


>gi|121730108|ref|ZP_01682509.1| DnaK suppressor protein [Vibrio cholerae V52]
 gi|121628143|gb|EAX60675.1| DnaK suppressor protein [Vibrio cholerae V52]
          Length = 216

 Score =  213 bits (544), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 50/228 (21%), Positives = 96/228 (42%), Gaps = 17/228 (7%)

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKE 250
           +  +++GG+DQ  N++ G +L +         L  PLL    G  KM K+    I +++ 
Sbjct: 2   ETDVELGGTDQKFNLLMGRELQKANGQKPQVVLMMPLLVGLDGEKKMSKSAHNYIGVSE- 60

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIATEITT 308
             +P   +    +I D  + S+ + L+  P+ E+ +       G    + K ++A EI  
Sbjct: 61  --APSEMFGKIMSISDDLMWSYYELLSFRPLEEVAQFKAEVANGANPRDIKILLAKEIIA 118

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
             H + +A+ A    +  F      + M      + E   G+ +  L+ +AG   ST++A
Sbjct: 119 RFHSQADADAAEQEFINRFQKGAMPEEM-----PEFEFESGIAISNLLKEAGLVASTSDA 173

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
            R +K  A+K++   + + KL          G      GK+      +
Sbjct: 174 LRMIKQGAVKLDGEKLEDAKLIPAC------GTSVYQVGKRKFARVTI 215


>gi|297172370|gb|ADI23345.1| tyrosyl-tRNA synthetase [uncultured Oceanospirillales bacterium
           HF0770_27O18]
          Length = 212

 Score =  211 bits (539), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 56/207 (27%), Positives = 98/207 (47%), Gaps = 11/207 (5%)

Query: 12  LSERGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           L  RG   +I    EL    + G  +    G+D TA  LH GH   +  L   Q+ GH  
Sbjct: 10  LLRRGA-DEIIQEDELRERIASGRPLRVKAGFDPTAPDLHLGHTVLINKLRQFQELGHHV 68

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           + L+G  T +IGDP+ +  +R  +  +EI+ N E  K      +     +    ++ N T
Sbjct: 69  MFLIGDFTGMIGDPTGKSATRPPLTPEEIERNAETYKEQVFKILDPEKTE----VVFNST 124

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           W+  +    +++ + S ++V RML  +    R +  Q ++  EF Y ++Q YD V +   
Sbjct: 125 WMNQVGAAGMIK-LASQYTVARMLERDDFDKRYRANQPIAVHEFLYPLVQGYDSVAM--- 180

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLK 217
            +  +++GG+DQ  N++ G  L +   
Sbjct: 181 -EADVELGGTDQKFNLLMGRTLQKATG 206


>gi|324515432|gb|ADY46199.1| Tyrosyl-tRNA synthetase [Ascaris suum]
          Length = 320

 Score =  210 bits (536), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 80/315 (25%), Positives = 151/315 (47%), Gaps = 24/315 (7%)

Query: 94  MRSQEIQENIEKIKGIFSSFIKY------GTGKTDALMLNNETWLCSIKYIDLLREIGSF 147
           M  + +++N  +I+   S   +               +++N  W   +  +  +R I   
Sbjct: 1   MAEEVVKKNAGEIRMQMSKMAQNFYEMHSNEKTEPMEIIDNTEWHSRMTSLQFVR-ICRL 59

Query: 148 FSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNII 207
           F V  ML   +++SR++    L   EF Y I+Q+YD+ +L++ YDC  Q+GGSDQ G++ 
Sbjct: 60  FRVGDMLRLGAIKSRMRENHGLPCSEFLYQIMQSYDWYQLSQKYDCYFQIGGSDQLGHLD 119

Query: 208 CGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL---SGAIWLNKEMTSPYNFWQYWRNI 264
            G D            +  PL+T ASG K+GK++      IWL++  TSPY F+Q++R  
Sbjct: 120 AGYDYIRLRTGRFSAGICLPLITDASGRKLGKSVASPKENIWLSEAKTSPYAFYQFFRQQ 179

Query: 265 DDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATEITTMVHGREEAEKAATA 322
            D ++V   +  +  P+SE++ +       + +  A++ +A E+T +VHGR+  + A   
Sbjct: 180 PDKEIVPLIRYFSLRPLSEVEEILSEHNANLGKWVAQEQLAQEMTRLVHGRKGLDLAQQC 239

Query: 323 AMECFDMSIHS-QHMPTISISKDEVSRGMGLLTLI---VKA--GFAT-STNEARR---HL 372
           +   F  S+   + +P  ++  +E+     +  L+   VK     A  + ++  R    +
Sbjct: 240 SRALFKGSLSDIEKIPLSTL--EELFGEASIRRLLKSEVKTVGDLADRTRSDKMRGSILM 297

Query: 373 KSNAIKINNSIISNE 387
           K  A+ +N     + 
Sbjct: 298 KKGALSLNGQKFIDP 312


>gi|218660716|ref|ZP_03516646.1| tyrosyl-tRNA synthetase [Rhizobium etli IE4771]
          Length = 227

 Score =  210 bits (535), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 82/192 (42%), Positives = 119/192 (61%), Gaps = 6/192 (3%)

Query: 225 TSPLLTTASGTKMGKTLSGAIWLNKEMTSP-YNFWQYWRNIDDADVVSFAKRLTTLPMSE 283
           T  L+    G      +     L +    P Y+FWQYWRN +DADV  F K  TTLPM E
Sbjct: 38  TDHLVRRQDGQ-----VGLRRGLAERRLLPVYDFWQYWRNTEDADVPRFLKLFTTLPMDE 92

Query: 284 IDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISK 343
           I R++ + G E+NE KKI+ATE+T ++HGR  AE+AA  A + F+    S+++P++ I  
Sbjct: 93  IARLSAIGGSELNEVKKILATEVTAILHGRPAAEQAAETARKTFEEGGLSENLPSVEIPA 152

Query: 344 DEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
            E+  G+GLL+L+V+AG A S  EARRH++  A++IN+  +S+E+  I   +  + G IK
Sbjct: 153 TELDGGIGLLSLMVRAGLAGSNGEARRHVQGGAVRINDEAVSDERRLIGSDEITADGVIK 212

Query: 404 LSFGKKNHIICH 415
           LS GKK HI+  
Sbjct: 213 LSLGKKKHILIR 224


>gi|53729288|ref|ZP_00348367.1| COG0162: Tyrosyl-tRNA synthetase [Pasteuria nishizawae str. North
           American]
          Length = 238

 Score =  210 bits (534), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 56/244 (22%), Positives = 107/244 (43%), Gaps = 16/244 (6%)

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           ++ N  WL  +   D+L ++ S  +V RML  E    R + ++ +   EF Y +LQ YD 
Sbjct: 7   VVYNSRWLEKLNLEDIL-QLMSQMTVARMLEREDFSQRYREKRPIGMHEFLYPLLQGYDS 65

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTK-MGKTLSG 243
           V L  +    +++GG+DQ  N++ G  L +     K   +T PLL    G K M K++  
Sbjct: 66  VVLESD----VELGGTDQTFNLLMGRQLQKFYGKGKQVVMTLPLLVGLDGQKKMSKSMGN 121

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINEAKK 300
            + + ++   P N +     + D  ++ + + +T     E++ + +  G+      EAK 
Sbjct: 122 QVGITED---PVNMYGKIMALSDESMLDYYQLITDYTSQEVEELRRELGEGSQHPMEAKH 178

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
            +A  +    H    A+ A     +        +  P  S+   E      +++++V+ G
Sbjct: 179 RLAHFVIGRYHSGLAAQMAGEHFRKTVQQKQLPEDFPECSLPPGEW----TVISVMVQVG 234

Query: 361 FATS 364
              S
Sbjct: 235 LVGS 238


>gi|153825685|ref|ZP_01978352.1| tyrosyl-tRNA synthetase [Vibrio cholerae MZO-2]
 gi|149740622|gb|EDM54731.1| tyrosyl-tRNA synthetase [Vibrio cholerae MZO-2]
          Length = 232

 Score =  208 bits (529), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 55/224 (24%), Positives = 97/224 (43%), Gaps = 11/224 (4%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M + ++    I  +RG    I     +  L     +   +G D TA  +H GH   L  L
Sbjct: 1   MASIEAALAEI--KRGVEELIPEEELIAKLKENRPLRIKLGADPTAPDIHLGHTVILNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q  GH    L+G  T ++GDP+ ++ +R  +  +++  N E  K      +     K
Sbjct: 59  RTFQDLGHDVTFLIGDFTGMVGDPTGKNTTRPPLTREDVLRNAETYKQQVFKILDPAKTK 118

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
               +  N  WL  +    ++R + S  +V RML  +  + R    Q ++  EF Y +LQ
Sbjct: 119 ----IQFNSEWLSKLGAEGMIR-LASNQTVARMLERDDFKKRYNNGQPIAIHEFMYPLLQ 173

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFAL 224
            YD V +    +  +++GG+DQ  N++ G +L +         +
Sbjct: 174 GYDSVAM----ETDVELGGTDQKFNLLMGRELQKANGPKTTSGI 213


>gi|71033279|ref|XP_766281.1| tyrosyl-tRNA synthetase [Theileria parva strain Muguga]
 gi|68353238|gb|EAN33998.1| tyrosyl-tRNA synthetase, putative [Theileria parva]
          Length = 512

 Score =  207 bits (527), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 97/386 (25%), Positives = 163/386 (42%), Gaps = 73/386 (18%)

Query: 6   SDFLSILSERGFIHQISNPRELDILCSQGVV---------TAYIGYDLTASSLHAGHLTQ 56
           S  LS   ER  I Q ++  +LD L +             + Y G D T   +H G L Q
Sbjct: 84  SRILSQCMERSMISQSTDFVKLDQLLTSYQTQNFNNSMYNSIYYGIDCTNDFIHEGTLFQ 143

Query: 57  LMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRR---------MMRSQEIQ------- 100
           L+LL          + ++GGGT+++GDPS++    R         ++     +       
Sbjct: 144 LLLLRRFLSENFNVVLVLGGGTTLVGDPSYKLRRNRNDNFHFSNFILNKDNSEIDTTNEQ 203

Query: 101 ENIEKIKGIFSSFIKYG------------------------------TGKTDALMLNNET 130
              E    I S  IK                                +      ++NN  
Sbjct: 204 AIEEIATKILSRPIKIENTGLYNDVIVVPKVVRVSNLESDLDILSEMSKPYRVFIVNNRD 263

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQS--------LSFLEFNYMILQAY 182
               +  ++ L  +    +V RML+ + ++ R+  +          +   E  YM LQA 
Sbjct: 264 IYNRVNLMEYLETVARNMNVGRMLARDCIKIRMLDKDGTGYKKSINMDLAELMYMSLQAM 323

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDL-------GERLKTPKLFALTSPLLTTASGT 235
           DFV LA+N++C++Q+GG+DQ GNI+ GI+L       G  L    ++ +T+PLL    G 
Sbjct: 324 DFVYLAQNFNCKIQLGGNDQMGNIVSGIELAGEHDTNGSSLGIGNVYGITTPLLKDKFGE 383

Query: 236 KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI 295
           K+ KT S         TSP+ FW ++R++DD++V ++ K  T + + +I           
Sbjct: 384 KISKTGSNCFLKITNKTSPHEFWSHFRSVDDSEVENYLKWFTDVSLDKIKESILEH---Y 440

Query: 296 NEAKKIIATEITTMVHGREEAEKAAT 321
           N  K ++A E+T +++G +  E    
Sbjct: 441 NSGKVLLADELTRLLYGNQTVELIHK 466


>gi|323250247|gb|EGA34137.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2009159199]
          Length = 195

 Score =  206 bits (526), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 61/193 (31%), Positives = 93/193 (48%), Gaps = 10/193 (5%)

Query: 231 TASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI---DRM 287
            A GTK GKT  GA+WL+ + TSPY F+Q+W N  DADV  F K  T + + EI   +  
Sbjct: 1   KADGTKFGKTEGGAVWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMDIEEINALEEE 60

Query: 288 AKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISI 341
            K  GK    A+ ++A ++T +VHG E    A       F  S+ +      + +    +
Sbjct: 61  DKNSGKAPR-AQYVLAEQVTRLVHGEEGLVAAKRITECLFSGSLSALSEADFEQLAQDGV 119

Query: 342 SKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
              E+ +G  L+  +V A    S  +AR+ + SNA+ IN    S+ +     +D      
Sbjct: 120 PMVEMEKGADLMQALVDAELQPSRGQARKTIASNAVTINGEKQSDPEYIFNDEDRLFGRY 179

Query: 402 IKLSFGKKNHIIC 414
             L  GKKN+ + 
Sbjct: 180 TLLRRGKKNYCLI 192


>gi|327350732|gb|EGE79589.1| hypothetical protein BDDG_02530 [Ajellomyces dermatitidis ATCC
           18188]
          Length = 355

 Score =  204 bits (519), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 75/314 (23%), Positives = 133/314 (42%), Gaps = 56/314 (17%)

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
           V++RL+  + ++  EF Y +LQA+D+ +L +  +  +Q+GGSDQ GNI  G+D  + L  
Sbjct: 5   VKNRLQSGKGMALSEFVYPLLQAWDWWQLIQQQNILVQVGGSDQAGNIQFGMDATKPLMK 64

Query: 219 P------------------KLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQY 260
                              +    T+PLLTTASG K GK+   A+WL+++MTS ++ +Q+
Sbjct: 65  ANDEYWRKHAPRDEDRKLLEPMGFTTPLLTTASGQKFGKSAGNAVWLDQDMTSSFDLYQF 124

Query: 261 WRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKKIIATEITTMVHGREEAEK 318
           +  + D +V  + K  T LP+  I  + +          A+  +A+E   ++ G  EA +
Sbjct: 125 FLRVTDENVEQYLKYFTFLPIPAIKELMEQHMQDPSKRIAQHKLASEFVELIRGPAEAAQ 184

Query: 319 AATAAMECFDMSIHSQHM---------------------PTISISKDEVSRGMGLLTLIV 357
           A       F     +                        P I++ +  +  G     ++ 
Sbjct: 185 AEKDHRSIFGGKTPTSDELTPRPKRDINLSETSPFNAPSPHITLPRS-LVVGQFFHKVLW 243

Query: 358 KAGFATSTNEARRHLKSNAIKI----NNSIISNEKLQI----------KLQDFDSTGNIK 403
            AG A S  EA R + +N   +    +++ I ++KL              +       + 
Sbjct: 244 SAGMAPSKAEAFRLVVNNGAAVASRSDSNAIMDDKLSYVPIKTWDKDMTEKFIIDDSLMI 303

Query: 404 LSFGKKNHIICHLC 417
           L  GK    I  + 
Sbjct: 304 LKVGKWKVKIIKIV 317


>gi|33416567|gb|AAH55576.1| Wu:fi41d10 protein [Danio rerio]
          Length = 404

 Score =  204 bits (519), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 86/418 (20%), Positives = 149/418 (35%), Gaps = 84/418 (20%)

Query: 15  RGFIHQISNP----RELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           RG +           E+  L   G  + Y G+D TA SLHAG+L  ++ L   +  GH  
Sbjct: 50  RGLLKDSFPEVAAQAEIPDLLRSGPQSIYCGFDPTADSLHAGNLLAIIGLLHFRSAGHHI 109

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           I+L+GG T+ IGDPS R   R  +    +QEN   I               +     + +
Sbjct: 110 IALLGGATAQIGDPSGRQTERERLSPATVQENARGILESLHRIF----THHELYFCPDSS 165

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
            L  +  ++           N     +              LEF                
Sbjct: 166 RLGRLTVLN-----------NHSWYKDY-----------DLLEFF--------------- 188

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKE 250
                ++G S + G ++    +  RLK+ +  + T                      + +
Sbjct: 189 ----SEVGRSFRMGTMLSRHSVQTRLKSAEGMSFTE--------------------FSYQ 224

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIATEITT 308
           +   ++F+Q    + D  V  + K  T L +SE++ + + Q K+     A K +A E+T 
Sbjct: 225 LFQAFDFYQ--LRLPDNSVERYLKLFTFLSLSEVENLMEQQRKDPGKRIAHKRLAAEVTK 282

Query: 309 MVHGREEAEKAATAAMECFDMSIHS-QHMPTISIS---------KDEVSRGMGLLTLIVK 358
           +VHG++  E A       +  SI + + M    +          +  +  G  +L    +
Sbjct: 283 LVHGKDGLESAKRCTTALYHSSIEALEQMSDTELQEIFREAPFHEFFLEPGTTVLDACRR 342

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQ-IKLQDFDSTGNIKLSFGKKNHIICH 415
           A          + +K   + IN+    N +   I  Q   S G   +  GK+N  I  
Sbjct: 343 AQSIPDGPRGYQMIKDGGVWINHQRAENPEQVLIGGQQILSNGLSLIRVGKRNFHILK 400


>gi|255025009|ref|ZP_05296995.1| tyrosyl-tRNA synthetase [Listeria monocytogenes FSL J1-208]
          Length = 151

 Score =  202 bits (514), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 51/151 (33%), Positives = 81/151 (53%), Gaps = 1/151 (0%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           + +  L  RG I+Q ++   L     +  ++ Y G D +  S+H GHL   M+L   Q  
Sbjct: 2   NIIDELEWRGAIYQQTDEEGLRKWVDEKQISLYCGIDPSGDSMHIGHLIPFMILRRFQNA 61

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GH+PI L+GG T  IGDPS + E R++   ++I +N+E ++        +  G + A M+
Sbjct: 62  GHRPIILVGGATGTIGDPSGKKEERKLQSMEQISKNVESLRVQLGKIFDF-EGDSAASMV 120

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFE 157
           NN  W   +  +D LR+ G  F+VN MLS +
Sbjct: 121 NNYDWTKDVSILDFLRDYGKEFNVNTMLSKD 151


>gi|195155049|ref|XP_002018419.1| GL17697 [Drosophila persimilis]
 gi|194114215|gb|EDW36258.1| GL17697 [Drosophila persimilis]
          Length = 337

 Score =  202 bits (514), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 55/233 (23%), Positives = 105/233 (45%), Gaps = 14/233 (6%)

Query: 197 MGGSDQWGNIICGIDLGERLKTP-KLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPY 255
           +   DQ GN++ G +L  R++   ++F +T P++T   G K GK+   A+WL++  TSP+
Sbjct: 103 IAAPDQTGNLMTGHELISRVERKREVFGMTLPIVTNEEGDKFGKSAGNAVWLDENKTSPF 162

Query: 256 NFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIATEITTMVHGR 313
             +Q++  + D++     K  T +P+ EI+++ +   KE    +A+ ++A ++T +VHG 
Sbjct: 163 ALYQFFLRMPDSEAEKLLKLFTFIPLPEIEQLMQEHEKEPEKRKAQTLLAEDVTLLVHGE 222

Query: 314 EEAEKAATAAMECFDMSI----------HSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
              ++A       +   +            Q     ++       GM +L L +KA    
Sbjct: 223 NGLKQAERVTNALYKGKVDGLAELNYAEIKQTFQGAAVVDLLTEPGMSILQLAMKAKCFP 282

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQ-DFDSTGNIKLSFGKKNHIICH 415
           +  +A R + +    +N   + N    I         G   L  GK+N  I  
Sbjct: 283 TETDAVRIINAGGFYVNQKRVQNIAEVITAGIHILRNGVSLLRVGKRNFYIVR 335



 Score =  110 bits (276), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 41/141 (29%), Positives = 66/141 (46%), Gaps = 10/141 (7%)

Query: 6   SDFLSILSERGFIHQI---SNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
            + L  L++RGF   I   +   ++  L + G  + Y G+D TA SLH G+L  +M L  
Sbjct: 26  KNLLE-LTDRGFFQGIFPDTAAPKIKQLFTSGQQSIYAGFDPTADSLHVGNLLVIMGLLH 84

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFS---SFIKYGTG 119
            Q+ GH+PI+L+GG T +I  P   D++  +M   E+   +E+ + +F      +    G
Sbjct: 85  CQRAGHRPIALVGGATGLIAAP---DQTGNLMTGHELISRVERKREVFGMTLPIVTNEEG 141

Query: 120 KTDALMLNNETWLCSIKYIDL 140
                   N  WL   K    
Sbjct: 142 DKFGKSAGNAVWLDENKTSPF 162


>gi|25145805|ref|NP_741383.1| tYrosinyl tRNA Synthetase family member (yrs-1) [Caenorhabditis
           elegans]
 gi|22532881|gb|AAM98001.1| C. elegans YARS-1 protein, isoform b, confirmed by transcript
           evidence [Caenorhabditis elegans]
          Length = 327

 Score =  201 bits (513), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 79/337 (23%), Positives = 144/337 (42%), Gaps = 29/337 (8%)

Query: 100 QENIEKIKGIFSSFIKYGTGKTD-ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
             N  K+        +   G ++  +++NN  WL  I   D LRE      V +ML   +
Sbjct: 1   MHNSRKVTDQICKIFENAPGSSEKPIIVNNNDWLGKISLRDFLREC-KNMQVGKMLRMNT 59

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLG-ERLK 217
           +++RL  E  LS+ EF+Y  +QA+D+  L++ Y CR Q+GG DQ G++  G     + + 
Sbjct: 60  IKNRL--EVGLSYTEFSYQTMQAFDWYTLSEKYGCRFQLGGYDQLGHLDFGAHYIKKMMN 117

Query: 218 TPKLFALTSPLLTTASGTKMGKTL-SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRL 276
                 +  P+LT ++G K+GK+   GA+WL+   TSP++F+Q++  + D          
Sbjct: 118 QAFAAGVCFPILTDSTGAKLGKSEGGGALWLDATKTSPFHFYQFFAQLHDDKAEELLLLF 177

Query: 277 TTLPMSEIDRMAKLQGKEINE--AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQ 334
           +   +  I  + K     + +  A++ +A EIT +VHG+E  E A       F       
Sbjct: 178 SLQDIEHIRDVLKNHRSNLGQWIAQRELAAEITRIVHGKEGLEVAMRCTKAMF--GAKKA 235

Query: 335 HMP-------------TISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINN 381
            +              TI + K+ V+    L      +   +        ++  A  +N 
Sbjct: 236 DLSGLSRSEVLQLFRTTIDLKKENVATMGQLAD---ASRLGSGKGHL--LMQQGAFSVNG 290

Query: 382 SIISNEKLQIKLQDFDSTGNIKLSF-GKKNHIICHLC 417
               +    I     ++  ++ L   GK+ + +    
Sbjct: 291 EKKRSPSESIADVFLENASDLTLVCWGKRGYQLVRWV 327


>gi|320583069|gb|EFW97285.1| de-n-glycosylation protein, putative [Pichia angusta DL-1]
          Length = 475

 Score =  200 bits (508), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 71/199 (35%), Positives = 104/199 (52%), Gaps = 18/199 (9%)

Query: 58  MLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG 117
           M+L      GH   +L+GG T       F    RR   S+                    
Sbjct: 1   MVLLHFNLRGHSITALVGGATGTAQFEQFFRNGRRYAASRN---------------HVLD 45

Query: 118 TGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYM 177
               +  + NN  W   + +++ L   G F  VN+MLS +S+RSRL  EQ + F EF Y 
Sbjct: 46  RPHGEVAVRNNYDWWKDMGFLEFLARYGRFIRVNQMLSRDSIRSRLDSEQGIGFNEFTYQ 105

Query: 178 ILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL---KTPKLFALTSPLLTTASG 234
           +LQAYDF  L KN+   +Q+GG+DQ+GNI+ G+DL +R+   +  K F +T PLLTTA+G
Sbjct: 106 LLQAYDFYYLNKNHGIDVQVGGNDQYGNIVAGLDLIDRMHPGEKKKAFGVTVPLLTTANG 165

Query: 235 TKMGKTLSGAIWLNKEMTS 253
            K GK+   A++++K +T 
Sbjct: 166 VKFGKSAGNAVFIDKNLTP 184


>gi|218458672|ref|ZP_03498763.1| tyrosyl-tRNA synthetase [Rhizobium etli Kim 5]
          Length = 163

 Score =  197 bits (502), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 74/160 (46%), Positives = 109/160 (68%)

Query: 256 NFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREE 315
           +FWQY RN +DADV  F +  TTLPM EI R++ + G E+NE KKI+ATE+T ++HGR  
Sbjct: 1   DFWQYGRNTEDADVPRFLQLFTTLPMDEIARLSAIGGSELNEVKKILATEVTAILHGRPA 60

Query: 316 AEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSN 375
           AE+AA  A + F+    S+++P++ I   E+  G+GLL+L+V+AG A S  EARRH++  
Sbjct: 61  AEQAAETARKTFEEGGLSENLPSVEIPAIELDGGIGLLSLMVRAGLAGSNGEARRHVQGG 120

Query: 376 AIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           A++IN+  +S+E+  I   +  + G IKLS GKK HI+  
Sbjct: 121 AVRINDEAVSDERRLIGSDEITADGVIKLSLGKKKHILIR 160


>gi|225012586|ref|ZP_03703021.1| Tyrosine--tRNA ligase [Flavobacteria bacterium MS024-2A]
 gi|225003119|gb|EEG41094.1| Tyrosine--tRNA ligase [Flavobacteria bacterium MS024-2A]
          Length = 158

 Score =  195 bits (495), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 58/162 (35%), Positives = 89/162 (54%), Gaps = 6/162 (3%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           MP   ++F+  L  RG +H I    E      +     YIG+D TA SLH G L Q+M+L
Sbjct: 1   MP---TNFVQELQWRGLLHDIMPETE--TFLLEKSSRGYIGFDPTADSLHIGSLVQIMIL 55

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG- 119
              Q+ GH PI L+GG T +IGDPS + + R ++    +++N   I+     F+ + +  
Sbjct: 56  MHFQRHGHAPIILVGGATGMIGDPSGKSDERNLLDQVTLEKNCTGIQNQLERFLDFDSSL 115

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
              A+++NN  W+ S   ID  RE+G   +VN M++ ESV+S
Sbjct: 116 PNPAILVNNYDWMKSYSLIDFSREVGKHITVNYMMAKESVKS 157


>gi|311252791|ref|XP_003125269.1| PREDICTED: LOW QUALITY PROTEIN: tyrosyl-tRNA synthetase,
           mitochondrial-like [Sus scrofa]
          Length = 383

 Score =  193 bits (490), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 103/423 (24%), Positives = 163/423 (38%), Gaps = 85/423 (20%)

Query: 9   LSILSERGFIHQISNP----RELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           L+I   RG I ++       REL  L    +V          SSL  GHL  L+ L   Q
Sbjct: 26  LAIPKARGLITELFPETGTKRELPELFHHSLVV---------SSLQVGHLLSLLGLTRSQ 76

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + GH  I+L  G T+ +G                                          
Sbjct: 77  RAGHNAIALXVGVTARLGA----------------------------------------- 95

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
                  L  ++ +  L  +        +LS  S+++RL   +     EF   +LQ  DF
Sbjct: 96  -------LYQMQRLSFLEAVRGHIHTGTLLSPLSLQTRLPTGKP-RRQEF-RQVLQLPDF 146

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
                    R+ +GGSDQ  +II G +   +L    +F ++ PL+TT   TK  K+   A
Sbjct: 147 Y--------RVPLGGSDQLSHIISGYEFIHKLAGEGIFTVSIPLITTR--TKQXKSTLNA 196

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKII 302
           IWLN+  TS +     +    D  V S+ K +T LP  E+D + +L  +  E    +K +
Sbjct: 197 IWLNRGKTSAFELCHSFVRQQDDLVESYLKLVTFLPFPELDHIMQLYVKDPEKKSCQKXL 256

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHS---------QHMPTISISKDEVSRGMGLL 353
           ATE+T +VHG+E  + A       +  SI +         + +   S S+  +  G  +L
Sbjct: 257 ATEVTLLVHGQEGLDSAERYREALYHGSIDALKVMADQEEEFLKEASFSELVLDPGTSVL 316

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD-FDSTGNIKLSFGKKNHI 412
               KA            +    + IN+  ++N +  + L       G + L  GK+N  
Sbjct: 317 DTCYKANATPHGPHGYWMITEGEVNINHRQVTNPESVLVLGQCILKNGFLLLKIGKRNFY 376

Query: 413 ICH 415
           I  
Sbjct: 377 IIK 379


>gi|302415799|ref|XP_003005731.1| tyrosyl-tRNA synthetase [Verticillium albo-atrum VaMs.102]
 gi|261355147|gb|EEY17575.1| tyrosyl-tRNA synthetase [Verticillium albo-atrum VaMs.102]
          Length = 561

 Score =  192 bits (488), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 67/256 (26%), Positives = 111/256 (43%), Gaps = 52/256 (20%)

Query: 7   DFLSILSERGFIHQISN-PRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           +   I  ERGFI  ++  P  +  L     + AY+G D TA SLH GHL  +M +FW+  
Sbjct: 62  NLWEIFEERGFIKDVAGRPELIKELMRTKRIGAYVGVDPTAPSLHLGHLLPMMPVFWMYL 121

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK--------YG 117
            G + ++L+GG T+ IGDP+ R  SR +M + EI  NI +I                 YG
Sbjct: 122 HGFRAVTLVGGATARIGDPTGRTTSRAIMSNSEISTNITRIHYQMKKLWDNIELEKHKYG 181

Query: 118 TGKTDA---LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEF 174
             KT +    ++NN TW  S+   D+++ +G +  +  MLS ++V+++++    ++  EF
Sbjct: 182 YKKTWSMSRHLVNNNTWWQSLSMYDVMKRLGRYLRMGPMLSRDTVKTKMESGDGMAVAEF 241

Query: 175 NYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG 234
            Y ++QA                                         +L          
Sbjct: 242 MYPLMQAP------------------------------RRGRGGASSCSL---------- 261

Query: 235 TKMGKTLSGAIWLNKE 250
            ++GK+   A+WL   
Sbjct: 262 PQVGKSAGNAVWLETN 277


>gi|330955034|gb|EGH55294.1| tyrosyl-tRNA synthetase [Pseudomonas syringae Cit 7]
          Length = 182

 Score =  191 bits (486), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 50/178 (28%), Positives = 81/178 (45%), Gaps = 5/178 (2%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L +RG    +     ++ L     +    G+D TA  LH GH   +  L   Q  GH+ I
Sbjct: 10  LIKRGADELLVEAELVEKLKRGQPLRIKAGFDPTAPDLHLGHTVLINKLRQFQDLGHQII 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+G  T +IGDPS +  +R  +  +++ +  E  K      +     +    +  N TW
Sbjct: 70  FLIGDFTGMIGDPSGKSATRPPLTREQVLDYAETYKSQVFKILDPAKTE----VAFNSTW 125

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
           +  +   D +R + S ++V RML  +    R K  QS++  EF Y ++Q YD V L  
Sbjct: 126 MDQLSPADFIR-LSSQYTVARMLERDDFDKRYKSNQSIAIHEFLYPLVQGYDSVALKA 182


>gi|109096144|ref|XP_001085644.1| PREDICTED: tyrosyl-tRNA synthetase, mitochondrial-like [Macaca
           mulatta]
          Length = 220

 Score =  190 bits (484), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 60/216 (27%), Positives = 98/216 (45%), Gaps = 13/216 (6%)

Query: 213 GERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSF 272
             RL    +F +T PL+T+ +G K+GK+   A+WLN++ TSP+  +Q++    D  V  +
Sbjct: 1   MHRLTGEDVFGITVPLITSTTGAKLGKSAGNAVWLNRDKTSPFELYQFFVRQPDDSVERY 60

Query: 273 AKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIATEITTMVHGREEAEKAATAAMECFDMS 330
            K  T LP+ EID + +L  KE     A+K +A E+T +VHGRE  + A       +  S
Sbjct: 61  LKLFTFLPLPEIDHIMQLHVKEPERRGAQKRLAAEVTKLVHGREGLDSAKRCTQALYHSS 120

Query: 331 IHSQHM----------PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKIN 380
           I +  +               S+  +  G  +L    KA          R +    + IN
Sbjct: 121 IDALEVMSDQELKELFKEAPFSELFLDPGTSVLDTCRKANAIPDGPRGYRMITEGGVSIN 180

Query: 381 NSIISNEKLQIKL-QDFDSTGNIKLSFGKKNHIICH 415
           +  ++N +  + + Q     G   L  GK+N  I  
Sbjct: 181 HRQVTNPESVLVVGQHILKNGLSLLKIGKRNFYIIK 216


>gi|226479904|emb|CAX73248.1| tyrosyl-tRNA synthetase [Schistosoma japonicum]
          Length = 347

 Score =  184 bits (468), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 70/200 (35%), Positives = 107/200 (53%), Gaps = 9/200 (4%)

Query: 137 YIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQ 196
            +D+ R +   F ++ +L  ESV+ R+    ++   EF Y ILQA DF+ L +NYDC  Q
Sbjct: 1   MMDISRNVLPHFKLSELLEKESVKLRMDSGNTMDLGEFFYPILQALDFLYLHENYDCYAQ 60

Query: 197 MGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS------GAIWLNKE 250
           +GG DQ GNI CG++L  R    ++F LT PL+TT  G K+GK++S        IWL   
Sbjct: 61  VGGHDQIGNITCGLNLIYRKLGRRVFGLTVPLITTPDGQKLGKSVSISDCGMDTIWLMGR 120

Query: 251 MTSPYNFWQYWRNIDDADV-VSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIATEIT 307
              PY+F+Q   N+ D  +     ++LT     EI+++     K+      +K++A E+T
Sbjct: 121 KLKPYHFYQKILNLPDGIISDKLLRQLTFFAPDEINQLLTNHEKDPSRRTVQKVLAEELT 180

Query: 308 TMVHGREEAEKAATAAMECF 327
            +VHG    + A  A    F
Sbjct: 181 LLVHGAYALQAAELATRIFF 200


>gi|34765046|ref|ZP_00145341.1| Tyrosyl-tRNA synthetase [Fusobacterium nucleatum subsp. vincentii
           ATCC 49256]
 gi|27885617|gb|EAA23062.1| Tyrosyl-tRNA synthetase [Fusobacterium nucleatum subsp. vincentii
           ATCC 49256]
          Length = 148

 Score =  178 bits (452), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 70/146 (47%), Positives = 92/146 (63%), Gaps = 4/146 (2%)

Query: 99  IQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
           I  N+E IK     FI +   K  A++ NN  WL ++ YI+ LR++G  FSVNRML+ E 
Sbjct: 2   IDHNVECIKKQMQKFIDFSDDK--AILANNADWLRNLNYIEFLRDVGEHFSVNRMLAAEC 59

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
            +SR+  E  LSFLEFNYMI+QAYDF  L   Y+C +Q+GG DQW N+I G++L  R   
Sbjct: 60  YKSRM--ENGLSFLEFNYMIMQAYDFYVLNHKYNCTMQLGGDDQWSNMIAGVELLRRKDR 117

Query: 219 PKLFALTSPLLTTASGTKMGKTLSGA 244
              +A+T  LLT + G KMG T  GA
Sbjct: 118 KSAYAMTCTLLTNSEGKKMGPTAKGA 143


>gi|221488404|gb|EEE26618.1| tyrosyl-tRNA synthetase, putative [Toxoplasma gondii GT1]
          Length = 912

 Score =  170 bits (432), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 78/251 (31%), Positives = 116/251 (46%), Gaps = 52/251 (20%)

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL-----------------KR 165
           A ++ N +WL  +  +D L E G+F S+ R+LS  SV   L                 + 
Sbjct: 380 AAIVENCSWLSGLSSLDFLTEFGAFLSLPRLLSRSSVEETLGPCLFGRGDRSPTRSSSRN 439

Query: 166 EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALT 225
           + + SF    Y +LQA D+  L + +    Q+GG DQWGNI  G++L  R     LF LT
Sbjct: 440 KANFSFASLAYAVLQAVDWCFLRRRFGVVGQVGGRDQWGNISTGLELARRRDNLCLFGLT 499

Query: 226 SPLLTTASGTKMGKTLSGA-------------------------------IWLNKEMTSP 254
           +PLL   +G KMGK+  GA                               +WL K++T P
Sbjct: 500 TPLLLNRAGVKMGKSGGGAGTKGTRREGEGEKAGGGKEGAMHANTPGGKTVWLRKDLTPP 559

Query: 255 YNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ----GKEINEAKKIIATEITTMV 310
             FW+YWRN+DDADV    +  T L + EI+ + +         +N  K+++A  +TT+V
Sbjct: 560 VEFWRYWRNVDDADVKRLLRWFTLLSLPEIEALEEDTRHCGAGALNYLKEVLADHVTTLV 619

Query: 311 HGREEAEKAAT 321
           HG    +    
Sbjct: 620 HGPSVTKAVRA 630



 Score = 55.2 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 20/47 (42%), Gaps = 1/47 (2%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
           + L  L+       S   ARR +   A++IN   I     +I L DF
Sbjct: 750 LSLSRLLAGVCLCPSRAAARRLIAQGAVRINGKRIQ-ADGEITLADF 795



 Score = 52.5 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/69 (37%), Positives = 39/69 (56%), Gaps = 1/69 (1%)

Query: 20  QISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH-KPISLMGGGT 78
           Q S  R +        ++ Y+G DLT  SLH GHL  L+LL  LQ     +P+ L+G  T
Sbjct: 191 QPSGERGMPDEQPDAPLSFYLGIDLTGGSLHIGHLLPLLLLRRLQCLQLVRPVLLLGTAT 250

Query: 79  SIIGDPSFR 87
           +++GDP+ +
Sbjct: 251 TLVGDPTGK 259


>gi|289676246|ref|ZP_06497136.1| tyrosyl-tRNA synthetase [Pseudomonas syringae pv. syringae FF5]
          Length = 191

 Score =  169 bits (429), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 46/197 (23%), Positives = 77/197 (39%), Gaps = 15/197 (7%)

Query: 224 LTSPLLTTASGTK-MGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMS 282
           +T PLL    G K M K+L   + + +   +P   +    +I D+ +  + + L+   M 
Sbjct: 1   MTMPLLEGLDGVKKMSKSLGNYVGIQE---APGIMYSKLVSIPDSLMWRYFELLSFRSME 57

Query: 283 EID--RMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS 340
           EID  +     G    + K  +A E+    HG E A  A  +A            +P IS
Sbjct: 58  EIDGLKADCEAGANPRDIKIKLAEELVARFHGEEAAANAHRSAGNRMKEGELPDDLPEIS 117

Query: 341 ISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG 400
           ++  E    M +  ++ KAG   +   AR  L S  ++I+  ++ +     KL       
Sbjct: 118 VAAAE---DMPISAVLNKAGLVKNAAVARDLLASGGVRIDGEVV-DRGFVFKL-----GA 168

Query: 401 NIKLSFGKKNHIICHLC 417
                 GKK      L 
Sbjct: 169 THVCQAGKKAFGRVTLV 185


>gi|207109787|ref|ZP_03243949.1| tyrosyl-tRNA synthetase [Helicobacter pylori HPKX_438_CA4C1]
          Length = 155

 Score =  168 bits (427), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 45/163 (27%), Positives = 78/163 (47%), Gaps = 10/163 (6%)

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           M  N TWL ++    ++ E+ + FSV RML  +    R K  + +S +EF Y +LQ YD 
Sbjct: 1   MCFNSTWLDALGAKGMI-ELCAKFSVARMLERDDFTKRYKENRPISIVEFLYPLLQGYDS 59

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASG-TKMGKTLS 242
           V +  +    +++GG+DQ  N++ G  L        +   +T PLL    G  KM K+L 
Sbjct: 60  VAIDAD----IELGGNDQKFNLLVGRFLQRAYGLNKEQSVITMPLLEGLDGVQKMSKSLG 115

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID 285
             + + +E   P   +    ++ D  +  +   L+   + EI+
Sbjct: 116 NYVGITEE---PNAMFGKIMSVSDDLMWRYYTLLSAKTLEEIE 155


>gi|297170505|gb|ADI21534.1| tyrosyl-tRNA synthetase [uncultured gamma proteobacterium
           HF0070_25G02]
          Length = 200

 Score =  168 bits (425), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 47/183 (25%), Positives = 78/183 (42%), Gaps = 13/183 (7%)

Query: 218 TPKLFALTSPLLTTASGTK-MGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRL 276
             +   +T P+L    G K M K+L+  I L     S  + +    +I D  +  +   L
Sbjct: 1   MEEQIIMTLPILEGTDGVKKMSKSLNNYIGL---KESSNDMFGKIMSISDDLMWRYFDLL 57

Query: 277 TTLPMSEIDRMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQ 334
           +     EI  + K   QG    EAKK+++ EI T  HG E+A  A       F       
Sbjct: 58  SFKSSVEIKELKKKTEQGLNPMEAKKMLSAEIVTRFHGEEKALLAEKEFTNRFSKGHDPA 117

Query: 335 HMPTISISKDEVSRGMGLLTLIV-----KAGFATSTNEARRHLKSNAIKINNSIISNEKL 389
            +  I +S    +  + +L L+      +     S +EARR +   A+KI+   IS+E +
Sbjct: 118 EIKLIKLSMK--TSSISILDLLSSEELGEHKLCKSKSEARRMIAQGAVKIDGKKISDEAI 175

Query: 390 QIK 392
            ++
Sbjct: 176 SVQ 178


>gi|82705307|ref|XP_726917.1| tyrosyl-tRNA synthetase [Plasmodium yoelii yoelii str. 17XNL]
 gi|23482519|gb|EAA18482.1| Tyrosyl-tRNA synthetase [Plasmodium yoelii yoelii]
          Length = 362

 Score =  164 bits (417), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 88/346 (25%), Positives = 150/346 (43%), Gaps = 74/346 (21%)

Query: 136 KYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRL 195
             ID L   G  F +N++L  ESV  + + ++ L+  + NY+ LQAYDF+ L K Y+  +
Sbjct: 1   NIIDFLNH-GGHFGINKLLRKESVIKKYQNKK-LTLKDLNYISLQAYDFLYLFKKYNTYI 58

Query: 196 QMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL-----SGAIWLNKE 250
           Q+GGSDQWGNI  GI+  + +   +L+ LT+ LL   +  K  K+L        IW++ E
Sbjct: 59  QIGGSDQWGNIQSGIEFCQNIYNKQLYGLTTNLLLYKNNIKFSKSLFHENKKLPIWIDTE 118

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPM-----------------SEIDRMAKLQGK 293
            TSPY FW ++RN++D  V S+   LT L +                 +E+ +  +L+ +
Sbjct: 119 YTSPYLFWNFFRNVEDQKVQSYIDMLTNLNINLDEELKNEVLKNEELKNEVLKNEELKNE 178

Query: 294 E-------------------------------------INEAKKIIATEITTMVHGR--- 313
           E                                     IN AKK +A  IT  ++G+   
Sbjct: 179 ELKNEELKNEELKNEELKNEELKNENEKNGIASRYDDIINSAKKKMADHITNTIYGKSLV 238

Query: 314 ----EEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRG-MGLLTLIVKAGFATSTNEA 368
               +  +          +     + +P   I+ + + +  + +  ++     A +  +A
Sbjct: 239 NKIHKINKIIKNNKFNEIENLQELKILPYNQININLIKQNKINITDILKSFQIAMTNKQA 298

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTG-----NIKLSFGKK 409
           +  +  N I IN  +I++ K  + + DF  T         L  GKK
Sbjct: 299 KEKINQNCIYINTKLITDPKYILNIMDFLKTKNDNNYYALLRLGKK 344


>gi|153825695|ref|ZP_01978362.1| tyrosyl-tRNA synthetase [Vibrio cholerae MZO-2]
 gi|149740632|gb|EDM54741.1| tyrosyl-tRNA synthetase [Vibrio cholerae MZO-2]
          Length = 169

 Score =  164 bits (416), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 37/182 (20%), Positives = 74/182 (40%), Gaps = 16/182 (8%)

Query: 237 MGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL--QGKE 294
           M K+    I +++   +P   +    +I D  + S+ + L+  P+ E+ +       G  
Sbjct: 1   MSKSAHNYIGVSE---APSEMFGKIMSISDDLMWSYYELLSFRPLEEVAQFKAEVANGAN 57

Query: 295 INEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLT 354
             + K ++A EI    H + +A+ A    +  F      + M      + E   G+ +  
Sbjct: 58  PRDIKILLAKEIIARFHSQADADAAEQEFINRFQKGAMPEEM-----PEFEFESGIAISN 112

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           L+ +AG   ST++A R +K  A+K++   + + KL          G      GK+     
Sbjct: 113 LLKEAGLVASTSDALRMIKQGAVKLDGEKLEDAKLIPAC------GTSVYQVGKRKFARV 166

Query: 415 HL 416
            +
Sbjct: 167 TI 168


>gi|289804201|ref|ZP_06534830.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. AG3]
          Length = 162

 Score =  163 bits (412), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 54/158 (34%), Positives = 80/158 (50%), Gaps = 10/158 (6%)

Query: 222 FALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPM 281
             LT PL+T A GTK GKT  GA+WL+ + TSPY F+Q+W N  DADV  F K  T + +
Sbjct: 6   ICLTVPLITKADGTKFGKTEGGAVWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMDI 65

Query: 282 SEI---DRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS----- 333
            EI   +   K  GK    A+ ++A ++T +VHG E    A       F  S+ +     
Sbjct: 66  EEINALEEEDKNSGKAPR-AQYVLAEQVTRLVHGEEGLVAAKRITECLFSGSLSALSEAD 124

Query: 334 -QHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARR 370
            + +    +   E+ +G  L+  +V A    S  +AR+
Sbjct: 125 FEQLAQDGVPMVEMEKGADLMQALVDAELQPSRGQARK 162


>gi|145635108|ref|ZP_01790814.1| tyrosyl-tRNA synthetase [Haemophilus influenzae PittAA]
 gi|145267716|gb|EDK07714.1| tyrosyl-tRNA synthetase [Haemophilus influenzae PittAA]
          Length = 169

 Score =  161 bits (408), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 45/182 (24%), Positives = 74/182 (40%), Gaps = 16/182 (8%)

Query: 237 MGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKE 294
           M K+L   I + +   +P + +    +I D  +  +   L+  P+SEI +      +GK 
Sbjct: 1   MSKSLGNYIGVTE---APSDMFGKVMSISDELMWDWYNLLSFRPLSEIAQLKSEVEKGKN 57

Query: 295 INEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLT 354
             + K ++A E+    H  E A  A    +  F        MP  + S +     +GL T
Sbjct: 58  PRDVKILLAKELIARFHNEEAANAAEQEFINRFQKGAMPDEMPEFTFSGE-----IGLAT 112

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           L+ +AG   ST+EA R  +   +KIN   + N K      D    G      GK+     
Sbjct: 113 LLKEAGLVPSTSEAIRSAQQGGVKINGEKVDNVK------DNAPKGTNFYQVGKRKFARV 166

Query: 415 HL 416
            +
Sbjct: 167 TV 168


>gi|289524533|ref|ZP_06441387.1| tyrosine--tRNA ligase [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
 gi|289502228|gb|EFD23392.1| tyrosine--tRNA ligase [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
          Length = 167

 Score =  156 bits (396), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 60/141 (42%), Positives = 80/141 (56%), Gaps = 2/141 (1%)

Query: 199 GSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFW 258
           G+DQ  NII GIDL  +    K + LT PLL TASG K GKT  G +WL+   T+PY F+
Sbjct: 1   GNDQQVNIIAGIDLIRKKLGAKAYGLTYPLLLTASGQKFGKTEEGTVWLSPVRTTPYKFY 60

Query: 259 QYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIATEITTMVHGREEA 316
           Q+W N DD DV  F K  T LP+ +I  +     +     EA+KI+A EIT +VHG   A
Sbjct: 61  QFWINADDRDVEKFLKLFTFLPIDDIKEVMSNHARHPERREAQKILAGEITRVVHGDNAA 120

Query: 317 EKAATAAMECFDMSIHSQHMP 337
           ++    A    +  I S+ +P
Sbjct: 121 KRVKKLARSYLERPIPSKILP 141


>gi|76664846|emb|CAJ17860.1| tyrosyl-tRNA synthetase [Candidatus Phytoplasma solani]
          Length = 200

 Score =  156 bits (396), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 54/197 (27%), Positives = 90/197 (45%), Gaps = 8/197 (4%)

Query: 226 SPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID 285
           +PLL  A+GTK GK+  G +WLN E TSPY  +QY+ ++ DA+++++ K LT +   EI 
Sbjct: 1   TPLLLNANGTKFGKSEQGVLWLNPEKTSPYEIYQYFLSVGDAEIINYLKTLTLISKKEIL 60

Query: 286 RMAK--LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFD---MSIHSQH---MP 337
            + K  LQ  +    +  +A +I  +++  +  +         F      +  +    + 
Sbjct: 61  ELEKQTLQNPQKRLGQMALAKKIINLIYSPKVLQDCLKTNELLFSNKKKVLMQEDFLLLE 120

Query: 338 TISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
                       + L+  +VK    TS +EAR  +K  +IKI N  I N    I  +   
Sbjct: 121 KTLFCYSTQLDSIFLVDALVKTKLTTSKSEAREFIKKGSIKIFNQQIKNPDYLITKETTL 180

Query: 398 STGNIKLSFGKKNHIIC 414
               I L   KKN+ + 
Sbjct: 181 FNKYILLKKSKKNNALI 197


>gi|237833291|ref|XP_002365943.1| tyrosyl-tRNA synthetase, putative [Toxoplasma gondii ME49]
 gi|211963607|gb|EEA98802.1| tyrosyl-tRNA synthetase, putative [Toxoplasma gondii ME49]
 gi|221508909|gb|EEE34478.1| tyrosyl-tRNA synthetase, putative [Toxoplasma gondii VEG]
          Length = 646

 Score =  154 bits (391), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 70/215 (32%), Positives = 101/215 (46%), Gaps = 48/215 (22%)

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL-----------------KR 165
           A ++ N +WL  +  +D L E G+F S+ R+LS  SV   L                 + 
Sbjct: 380 AAIVENCSWLSGLSSLDFLTEFGAFLSLPRLLSRSSVEETLGPCLFGRGDRSPTRSSSRN 439

Query: 166 EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALT 225
           + + SF    Y +LQA D+  L + +    Q+GG DQWGNI  G++L  R     LF LT
Sbjct: 440 KANFSFASLAYAVLQAVDWCFLRRRFGVVGQVGGRDQWGNISTGLELARRRDNLCLFGLT 499

Query: 226 SPLLTTASGTKMGKTLSGA-------------------------------IWLNKEMTSP 254
           +PLL   +G KMGK+  GA                               +WL K++T P
Sbjct: 500 TPLLLNRAGVKMGKSGGGAGTKGTRREGEGEKAGGGKEGAMHAKTPGGKTVWLRKDLTPP 559

Query: 255 YNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK 289
             FW+YWRN+DDADV    +  T L + EI+ + +
Sbjct: 560 VEFWRYWRNVDDADVKRLLRWFTLLSLPEIEALEE 594



 Score = 52.9 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 26/69 (37%), Positives = 39/69 (56%), Gaps = 1/69 (1%)

Query: 20  QISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH-KPISLMGGGT 78
           Q S  R +        ++ Y+G DLT  SLH GHL  L+LL  LQ     +P+ L+G  T
Sbjct: 191 QPSGERGMPDEQPDAPLSFYLGIDLTGGSLHIGHLLPLLLLRRLQCLQLVRPVLLLGTAT 250

Query: 79  SIIGDPSFR 87
           +++GDP+ +
Sbjct: 251 TLVGDPTGK 259


>gi|325473315|gb|EGC76510.1| hypothetical protein HMPREF9353_02305 [Treponema denticola F0402]
          Length = 142

 Score =  154 bits (390), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 45/140 (32%), Positives = 75/140 (53%), Gaps = 3/140 (2%)

Query: 275 RLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQ 334
             T L + EI  +      +IN+AK+ +A E+T ++HG+EEAEKA   A   F    +  
Sbjct: 3   LFTFLSIEEIKSVC---AGDINKAKERLAFEVTALIHGKEEAEKALEGARAAFSGGGNKD 59

Query: 335 HMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
            MPT ++S  +++ G+G++ L  +AG A++ ++ARR ++     IN   IS+ K  I  +
Sbjct: 60  AMPTANLSLSKLNDGIGIIDLFAEAGLASTKSDARRLVEQGGAFINEEKISDIKAIIGKE 119

Query: 395 DFDSTGNIKLSFGKKNHIIC 414
             D    + L  GKK  +  
Sbjct: 120 KLDKDNEMILRAGKKRFMRI 139


>gi|156186010|gb|ABU55323.1| tyrosyl-tRNA synthetase [Callosobruchus chinensis]
          Length = 126

 Score =  153 bits (388), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 71/125 (56%), Positives = 97/125 (77%)

Query: 77  GTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIK 136
           GT+ IGDPSF+D++R ++  + I +N   I+ I    + +   KT A+++NN  WL +IK
Sbjct: 1   GTTKIGDPSFKDKARSILPVENINQNTSSIRRILEKMMSFNDSKTGAMIVNNADWLDNIK 60

Query: 137 YIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQ 196
           YID L +IG++FSVNRMLSF+SV++RL REQ+LSFLEFNYM+LQAYDFVEL K + CRLQ
Sbjct: 61  YIDFLGDIGAYFSVNRMLSFDSVKTRLDREQTLSFLEFNYMLLQAYDFVELNKKHGCRLQ 120

Query: 197 MGGSD 201
           +GGS+
Sbjct: 121 IGGSN 125


>gi|26350695|dbj|BAC38984.1| unnamed protein product [Mus musculus]
          Length = 222

 Score =  152 bits (385), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 52/175 (29%), Positives = 78/175 (44%), Gaps = 16/175 (9%)

Query: 13  SERGFIHQISNP----RELDILCS-----QGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
             RG   +         EL  L           T Y G+D T  SLH GHL  L+ LF  
Sbjct: 37  RARGLFKEFFPESGTKTELPELFDRRRAGSSPQTVYCGFDPTGDSLHVGHLLTLLGLFHF 96

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI-------EKIKGIFSSFIKY 116
           Q+ GH  I+L+GG T+++GDPS R + R  + ++ ++ N        E +    +     
Sbjct: 97  QRAGHNVIALVGGSTALLGDPSGRTKGREALSAKCVRANAHALRRGLEALAANHARLFAD 156

Query: 117 GTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSF 171
           G       +L+N  W      +D L  +G  F +  +LS  SV+SRLK  + +S 
Sbjct: 157 GRPWGSFTVLDNAAWFQEQHLVDFLATVGGHFRMGTLLSRLSVQSRLKSPEGMSL 211


>gi|148989918|ref|ZP_01821201.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae SP6-BS73]
 gi|147924703|gb|EDK75788.1| tyrosyl-tRNA synthetase [Streptococcus pneumoniae SP6-BS73]
          Length = 109

 Score =  151 bits (381), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 43/107 (40%), Positives = 59/107 (55%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
               L ERG I Q ++   L     +G V+ Y GYD TA SLH GHL  ++    LQ  G
Sbjct: 3   IFDELKERGLIFQTTDEEALRKALEEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFI 114
           HKP +L+GG T +IGDPSF+D  R +     +   ++ I+G  S F+
Sbjct: 63  HKPYALVGGATGLIGDPSFKDAERSLQTKDTVDGWVKSIQGQLSRFL 109


>gi|325118084|emb|CBZ53635.1| putative tyrosyl-tRNA synthetase [Neospora caninum Liverpool]
          Length = 948

 Score =  145 bits (367), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 79/307 (25%), Positives = 119/307 (38%), Gaps = 76/307 (24%)

Query: 119 GKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL--------------- 163
               A ++ N  WL  +  +D L E G++ S+ R+LS  SV   L               
Sbjct: 389 KPPPATIVENRAWLGGLSSLDFLTEFGAYLSLPRLLSRSSVEETLGPCLPARNTPTRSGD 448

Query: 164 --------KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER 215
                     + + SF    Y +LQA D+  L +      Q+GG DQWGNI  G++L  R
Sbjct: 449 AGAQPQKAASKANFSFASLAYSVLQAVDWSFLRRRLGVVGQVGGGDQWGNIATGLELARR 508

Query: 216 LKTPKLFALTSPLLTTASGTKMGKT----------------------LSG---------- 243
               +LF +T+PLL   SG KMGK+                        G          
Sbjct: 509 RDNARLFGITTPLLLHRSGVKMGKSGSPGGTGTRTGTDSAFRRGDEGEGGRVDESRRGHS 568

Query: 244 ---------AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--- 291
                     +WL K++T P  FWQ+WRN+DD DV    +  T L + EID + +     
Sbjct: 569 TLPKSPGGKTVWLRKDLTPPVEFWQHWRNVDDGDVRRLLRWFTLLSVPEIDALEEDTRHC 628

Query: 292 -GKEINEAKKIIATEITTMVHGREEAEKA--------ATAAMECFDMSIHSQHMPTISIS 342
             + +N  K+++A  +TT+VHG                 ++             P  + S
Sbjct: 629 GERGLNYLKEVLADHVTTLVHGSSITRAVRAVVTAGRQQSSFAFASAPALPLRPPEYAGS 688

Query: 343 KDEVSRG 349
           + E    
Sbjct: 689 ESEAGEN 695



 Score = 53.7 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 24/70 (34%), Positives = 39/70 (55%), Gaps = 1/70 (1%)

Query: 19  HQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH-KPISLMGGG 77
              +  R+ +       ++ Y+G DLT  SLH GHL  L+LL  LQ     +P+ L+G  
Sbjct: 210 QDATAGRDGEDASCDQPLSFYLGIDLTGRSLHIGHLLPLLLLRRLQCLQLVRPVILLGTA 269

Query: 78  TSIIGDPSFR 87
           T+++GDP+ +
Sbjct: 270 TTLVGDPTGK 279



 Score = 38.6 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 8/31 (25%), Positives = 16/31 (51%), Gaps = 1/31 (3%)

Query: 367 EARRHLKSNAIKINNSIIS-NEKLQIKLQDF 396
            ARR +    ++IN   +  + ++ + L DF
Sbjct: 801 AARRLIAQGTVRINGKKLQADGEVALALADF 831


>gi|327350731|gb|EGE79588.1| hypothetical protein BDDG_02529 [Ajellomyces dermatitidis ATCC
           18188]
          Length = 241

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 42/166 (25%), Positives = 77/166 (46%), Gaps = 12/166 (7%)

Query: 5   KSDFLSILSERGFIHQIS-NPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           +  FL ++ ERG ++Q+  +   L+ + ++  V  Y G D TA SLH GH+   M+L W 
Sbjct: 76  RKSFLELMEERGLVNQVIGDRDALNKMWTERRVGVYAGVDPTAPSLHVGHMLPFMVLAWA 135

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSF--------IK 115
              G + + L+GG T  +GDP+ R   R  M +   +EN+  +                K
Sbjct: 136 YVHGIRTVFLLGGSTGQVGDPTDRLAPRAKMAAVTRKENMANMHLQLKKLGMSIERYAAK 195

Query: 116 YGTGKTDAL---MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
           +G          ++NN +W     + ++++ +G    +  ML  ++
Sbjct: 196 HGYESEWIWRRAIVNNNSWWLKEPFFEVMKTMGEAVRLGPMLGRDT 241


>gi|255024986|ref|ZP_05296972.1| tyrosyl-tRNA synthetase [Listeria monocytogenes FSL J1-208]
          Length = 161

 Score =  141 bits (355), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 44/148 (29%), Positives = 65/148 (43%), Gaps = 16/148 (10%)

Query: 251 MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK--LQGKEINEAKKIIATEITT 308
            T+PY F+Q+W N DD DVV + K  T L  +EID +AK       +  A K +A E+T 
Sbjct: 1   KTTPYEFYQFWINTDDRDVVKYLKYFTFLTEAEIDELAKQVETEPHLRAAXKTLAAEMTK 60

Query: 309 MVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIVK 358
            VH  E  E+A   +   F   + +          + +PT      E      L+  +V 
Sbjct: 61  FVHSEEALEQALKISKALFSGDVKALTADEIEQGFKDVPTFVAEDSE----ANLVDWLVT 116

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISN 386
            G   S  +AR  + + AI IN     +
Sbjct: 117 LGIEPSKRQAREDVGNGAIYINGERQQD 144


>gi|70938703|ref|XP_739992.1| tyrosine--tRNA ligase [Plasmodium chabaudi chabaudi]
 gi|56517390|emb|CAH79524.1| tyrosine--tRNA ligase, putative [Plasmodium chabaudi chabaudi]
          Length = 254

 Score =  138 bits (349), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 65/238 (27%), Positives = 104/238 (43%), Gaps = 30/238 (12%)

Query: 202 QWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL-----SGAIWLNKEMTSPYN 256
           QWGNI  GI+  + +   +L+ LT+ LL   +  K  K+L        IW+NKE T PY 
Sbjct: 1   QWGNIQSGIEFCQNIYNQQLYGLTTNLLLYKNNMKFSKSLFYENKKLPIWINKEYTPPYL 60

Query: 257 FWQYWRNIDDADVVSFAKRLTTLPM---SEIDRMAKLQGKE---------INEAKKIIAT 304
           FW + RN++D  V S+   LT L +    E+ +      K          IN AKK +A 
Sbjct: 61  FWNFLRNVEDQKVQSYIDMLTNLNINLDEELKKSDHESSKNRNISSYDNIINSAKKQMAD 120

Query: 305 EITTMVHGREEAEKAATA----AMECFDMSIHSQHM---PTISISKDEVSRG-MGLLTLI 356
            IT  ++G+    K            F+   + Q +   P   I+ + + +  + +  ++
Sbjct: 121 HITNTIYGKSVINKIHKINNIIKNNQFNEIENLQELKILPYNQININSIKQNEINITDVL 180

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG-----NIKLSFGKK 409
                A +  EA+  +  N I IN  +I++ K  + + DF  T         L  GKK
Sbjct: 181 KFFQIAMTNKEAKEKINQNCIYINTKLITDPKYVLTITDFLKTKDHNYYYALLRLGKK 238


>gi|330955915|gb|EGH56175.1| tyrosyl-tRNA synthetase [Pseudomonas syringae Cit 7]
          Length = 128

 Score =  135 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 30/131 (22%), Positives = 51/131 (38%), Gaps = 6/131 (4%)

Query: 217 KTPKLFALTSPLLTTASGTK-MGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKR 275
                  LT PLL    G K M K+L   + + +   +P   +    +I D+ +  + + 
Sbjct: 1   GQEPQCILTMPLLEGLDGVKKMSKSLGNYVGIQE---APGIMYSKLVSIPDSLMWRYFEL 57

Query: 276 LTTLPMSEID--RMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS 333
           L+   M EI+  +     G    + K  +A E+    HG E A  A  +A          
Sbjct: 58  LSFRSMEEINSLKADCEAGANPRDIKIKLAEELVARFHGEEAAANAHRSAGNRMKEGELP 117

Query: 334 QHMPTISISKD 344
             +P IS++  
Sbjct: 118 DDLPEISVAAA 128


>gi|295091149|emb|CBK77256.1| Tyrosyl-tRNA synthetase [Clostridium cf. saccharolyticum K10]
          Length = 130

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 39/131 (29%), Positives = 74/131 (56%), Gaps = 3/131 (2%)

Query: 287 MAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV 346
           M + +G ++N+AK+I+A E+T +VHG EEA KA  A+   F    ++ +MPT  + +++ 
Sbjct: 1   MDQWEGSQLNKAKEILAYELTALVHGEEEAVKAQEASRALFTSG-NAANMPTAKLKEEDF 59

Query: 347 SRG-MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLS 405
           + G + +L+++ K+G A S +EARR+++   + ++   + + K           G + + 
Sbjct: 60  ADGSIDILSILQKSGLAPSRSEARRNVEQGGVSVDGVQVKDIKAAFTKDQLSGEG-VVVK 118

Query: 406 FGKKNHIICHL 416
            GKKN     L
Sbjct: 119 RGKKNFKRVVL 129


>gi|294623999|ref|ZP_06702778.1| tyrosyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
 gi|292601702|gb|EFF45660.1| tyrosyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
          Length = 175

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 42/176 (23%), Positives = 69/176 (39%), Gaps = 10/176 (5%)

Query: 224 LTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT-LPM 281
           LT PLL   +G  KM K+L   I +N+      +       I DA    +   L+  + +
Sbjct: 2   LTMPLLEGLTGVAKMSKSLGNYIGINEPA---IDIVTKTMKIGDALTWRWIDLLSFDISL 58

Query: 282 SEIDRMAKLQGK---EINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPT 338
           +E  R+ +          E K  +A E+ T  H    AE+A             +  +P 
Sbjct: 59  AEAARLKEQVASGELHPREVKLRLARELATRFHDAATAEQAIAGWHAVVTGQGDTSLLPL 118

Query: 339 ISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
             +     + G+ L  L+  AG   S +EA R LK  A+KI+  ++ +        
Sbjct: 119 QEVVVP--AEGLRLAGLLTAAGLTPSNSEATRKLKERAVKIDGEVVEDLSRVFTQG 172


>gi|70953026|ref|XP_745641.1| hypothetical protein [Plasmodium chabaudi chabaudi]
 gi|56526028|emb|CAH76862.1| hypothetical protein PC000802.01.0 [Plasmodium chabaudi chabaudi]
          Length = 294

 Score =  131 bits (331), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 61/242 (25%), Positives = 100/242 (41%), Gaps = 52/242 (21%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILC------SQGVVTAYIGYDLTASSLHAGHLTQL 57
            KS+ L  L ER  I+  S+ + +D +       ++   + Y+G DL    LH G L  L
Sbjct: 55  IKSNALKKLYERKLINYTSDIKGIDKILYENEQENENKKSVYVGIDLNCKYLHIGSLIPL 114

Query: 58  MLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG 117
            +L  L+      I L+G  T+ IGDPSF+   R+   ++EI +N + IK     +I   
Sbjct: 115 TVLEILRNYKTDVIILLGNSTTKIGDPSFQTNERKQTLNEEIYQNEKSIKETIIDYILNN 174

Query: 118 T--------------------------------------------GKTDALMLNNETWLC 133
                                                        GK    +L N  W  
Sbjct: 175 DNSNFNATDFPMRQLCGMNLNQMSFQDICKKTDLLSKDEIIYECNGKGSLRILKNNGWYD 234

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDC 193
            +  ID L+  G  F ++++L  +SV  + +  ++L+  + NY+ LQ+YDF+ L K Y  
Sbjct: 235 KMSVIDFLK-YGEHFGIHKLLRKDSVIKKYQ-NKNLTLKDLNYISLQSYDFLYLYKKYKT 292

Query: 194 RL 195
            +
Sbjct: 293 YI 294


>gi|297185013|gb|ADI21122.1| tyrosyl-tRNA synthetase [uncultured gamma proteobacterium
           EB750_07C09]
          Length = 123

 Score =  129 bits (325), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 34/119 (28%), Positives = 53/119 (44%), Gaps = 6/119 (5%)

Query: 197 MGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPY 255
           MGG+DQ  N++ G  + +  +     A T PLL    G  KM K+    I + +   SP 
Sbjct: 1   MGGTDQKFNLLVGRHIQQSFEQEPQIAFTMPLLEGLDGVRKMSKSYDNYIGITE---SPN 57

Query: 256 NFWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEITTMVHG 312
             +    +I D  +  + + L+   + EI   R A  QGK   + K  +A EI +  H 
Sbjct: 58  EMFGKLMSISDELMWRYFELLSFHSLGEIKNFRTAVDQGKNPRDIKFELAIEIVSRFHD 116


>gi|205374490|ref|ZP_03227286.1| tyrosyl-tRNA synthetase [Bacillus coahuilensis m4-4]
          Length = 104

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 31/84 (36%), Positives = 43/84 (51%)

Query: 7  DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
          D L  L  RG ++Q ++   L  +     +  Y G D T  S+H GHL   + L   Q  
Sbjct: 2  DILKELEWRGILYQQTDEEGLSNVLHTEKIALYCGVDPTGDSMHIGHLLPFLTLRRFQNA 61

Query: 67 GHKPISLMGGGTSIIGDPSFRDES 90
          GH PI L+GG T +IGDPS + + 
Sbjct: 62 GHTPIVLVGGATGLIGDPSGKKKK 85


>gi|218661276|ref|ZP_03517206.1| tyrosyl-tRNA synthetase [Rhizobium etli IE4771]
          Length = 111

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 57/79 (72%), Positives = 63/79 (79%)

Query: 1  MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
          M  FKSDFL  L ERGFIHQIS+ R LD L ++  VTAYIGYD TASSLH GHLTQ+M+L
Sbjct: 1  MSEFKSDFLRTLKERGFIHQISDERGLDDLFAKETVTAYIGYDPTASSLHVGHLTQIMML 60

Query: 61 FWLQKTGHKPISLMGGGTS 79
           WLQ TGH+PISLMGGGT 
Sbjct: 61 HWLQATGHRPISLMGGGTG 79


>gi|294636382|ref|ZP_06714770.1| tyrosine--tRNA ligase [Edwardsiella tarda ATCC 23685]
 gi|291090357|gb|EFE22918.1| tyrosine--tRNA ligase [Edwardsiella tarda ATCC 23685]
          Length = 142

 Score =  126 bits (317), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 32/140 (22%), Positives = 58/140 (41%), Gaps = 7/140 (5%)

Query: 281 MSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS------Q 334
           +  ++   K  GK    A+ ++A E+T +VHG E  + A       F  S++        
Sbjct: 1   IDALEEEDKNSGKAPR-AQYVLAEEVTRLVHGAEGLQAAQRITHSLFSGSLNEMTEADFA 59

Query: 335 HMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
            +    +   E+S G  L   +V +    S  +AR+ + SNA+ +N    ++ +      
Sbjct: 60  QLAQDGMPMIEMSIGADLQQALVDSELQPSRGQARKTIASNAVTVNGEKQADPEYTFSDS 119

Query: 395 DFDSTGNIKLSFGKKNHIIC 414
           D        L  GKKN+ + 
Sbjct: 120 DRLFGRYTLLRRGKKNYCLI 139


>gi|33322971|gb|AAQ07222.1|AF496530_1 tyrosyl-tRNA synthetase 1 [Lactobacillus delbrueckii subsp.
          lactis]
          Length = 90

 Score =  126 bits (317), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 35/86 (40%), Positives = 46/86 (53%), Gaps = 1/86 (1%)

Query: 7  DFLSILSERGFIHQISNPRELDILCSQ-GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
          D L  L  RG I+Q ++   L    ++   +  Y G D T  SLH GHL   M+L   Q 
Sbjct: 5  DILEDLKWRGAINQETDEEGLRDYLAKHDDLALYCGTDPTGDSLHIGHLIPFMILKRFQL 64

Query: 66 TGHKPISLMGGGTSIIGDPSFRDESR 91
           G+KP+ ++GGGT  IGDPS R   R
Sbjct: 65 AGYKPVIVIGGGTGSIGDPSGRSTER 90


>gi|76664689|emb|CAJ17785.1| tyrosyl-tRNA synthetase [Candidatus Phytoplasma solani]
          Length = 116

 Score =  126 bits (317), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 38/107 (35%), Positives = 58/107 (54%), Gaps = 1/107 (0%)

Query: 8   FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           F   L  R  I   +N  EL  L   G +  Y G+D TA SL  GHL Q+ ++  LQ+ G
Sbjct: 3   FYEELKWRNLIKDCNNEEELKQLLGHGKIKFYCGFDPTADSLTVGHLVQITMISLLQQQG 62

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFI 114
           H P++L+GG T +IGDP    E R++   ++  +N + I+  F + +
Sbjct: 63  HLPVTLVGGATGLIGDPK-ETEERKLSSLEKSLKNAQSIEKQFKALL 108


>gi|153845945|ref|ZP_01993814.1| tyrosyl-tRNA synthetase 1 [Vibrio parahaemolyticus AQ3810]
 gi|149745022|gb|EDM56320.1| tyrosyl-tRNA synthetase 1 [Vibrio parahaemolyticus AQ3810]
          Length = 164

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 41/136 (30%), Positives = 59/136 (43%), Gaps = 14/136 (10%)

Query: 231 TASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKL 290
            + GTK GKT  GA+WL+   TSPY F+Q+W   +DADV  F +  T L   EI  +   
Sbjct: 1   KSDGTKFGKTEGGAVWLDPSKTSPYAFYQFWLGAEDADVYHFLRYYTFLSCEEIASIEAQ 60

Query: 291 QGKE--INEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS-----------QHMP 337
                   +A++I+A E+T  VHG E    A       F  ++               +P
Sbjct: 61  DQASQGKPQAQRILAEEMTRFVHGEEGLASAERITQALFSGNVQQLSLGELKQLELDGLP 120

Query: 338 TIS-ISKDEVSRGMGL 352
           +I  +   E      L
Sbjct: 121 SIEVLPVIECELSQWL 136


>gi|163802289|ref|ZP_02196183.1| tyrosyl-tRNA synthetase [Vibrio sp. AND4]
 gi|159173818|gb|EDP58632.1| tyrosyl-tRNA synthetase [Vibrio sp. AND4]
          Length = 133

 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 31/136 (22%), Positives = 56/136 (41%), Gaps = 6/136 (4%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M + ++    I  +RG    I     +  L     +   +G D TA  +H GH      L
Sbjct: 1   MASIEAALAEI--KRGVDELIPEEELIAKLKEGRPLRIKLGADPTAPDIHLGHTVIFNKL 58

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
              Q+ GH+   L+G  T+++GDP+ ++ +R  +  +++  N E  K      +     K
Sbjct: 59  RLFQELGHEVTFLIGDFTAMVGDPTGKNTTRPPLSREDVLRNAETYKEQVFKILDPAKTK 118

Query: 121 TDALMLNNETWLCSIK 136
               +  N  WL  + 
Sbjct: 119 ----IQFNSEWLSELG 130


>gi|330861037|emb|CBX71308.1| hypothetical protein YEW_BZ08530 [Yersinia enterocolitica W22703]
          Length = 80

 Score =  124 bits (311), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 29/72 (40%), Positives = 41/72 (56%)

Query: 6  SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
          S+ +  L ERG + Q+++   L    +QG ++ Y G+D TA SLH GHL  L+ L   Q 
Sbjct: 4  SNLIKQLQERGLVAQVTDEDALAERLAQGPISLYCGFDPTADSLHLGHLVPLLCLKRFQL 63

Query: 66 TGHKPISLMGGG 77
           GH+P   M GG
Sbjct: 64 AGHRPGCFMWGG 75


>gi|297170579|gb|ADI21606.1| tyrosyl-tRNA synthetase [uncultured Oceanospirillales bacterium
           HF0130_06B06]
          Length = 160

 Score =  124 bits (311), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 36/158 (22%), Positives = 68/158 (43%), Gaps = 9/158 (5%)

Query: 268 DVVSFAKRLTTLPMSEIDRMA--KLQGKEINEAKKIIATEITTMVHGREEAEKAATAAME 325
           DV  + +  T L + EI  +       +   EA+ I+A+E+T ++HG E    A   +  
Sbjct: 2   DVYKYLRYFTFLSIEEIQEIELSDKSSQSKPEAQSILASEVTKLLHGGEGLAAAKRISDS 61

Query: 326 CFDMSIHS------QHMPTISISKDEVSRG-MGLLTLIVKAGFATSTNEARRHLKSNAIK 378
            F   I        + +    + K   + G + ++ ++V+   A S   AR  + +NAI 
Sbjct: 62  LFSGDISKLTRDDLKQLDLDGLPKTSFAGGQVDIIQVLVRTELAKSNKMAREFIGNNAIS 121

Query: 379 INNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           +N S++ +  L +   +    G   L  GKK   +  +
Sbjct: 122 VNGSLVHSGDLILDASNALEGGYFVLRRGKKMFHLIKV 159


>gi|330955998|gb|EGH56258.1| tyrosyl-tRNA synthetase [Pseudomonas syringae Cit 7]
          Length = 106

 Score =  123 bits (309), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 28/106 (26%), Positives = 49/106 (46%), Gaps = 8/106 (7%)

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGK 239
            YD V L  +    +++GG+DQ  N++ G +L           LT PLL    G  KM K
Sbjct: 1   GYDSVALKAD----VELGGTDQKFNLLMGRELQRAYGQEPQCILTMPLLEGLDGVKKMSK 56

Query: 240 TLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID 285
           +L   + + +   +P   +    +I D+ +  + + L+   M EI+
Sbjct: 57  SLGNYVGIQE---APGIMYSKLVSIPDSLMWRYFELLSFRSMEEIN 99


>gi|270490522|ref|ZP_06207596.1| S4 domain protein [Yersinia pestis KIM D27]
 gi|270339026|gb|EFA49803.1| S4 domain protein [Yersinia pestis KIM D27]
          Length = 147

 Score =  122 bits (307), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 34/145 (23%), Positives = 56/145 (38%), Gaps = 10/145 (6%)

Query: 279 LPMSEI---DRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS-- 333
           + + EI   +   K  GK    A+ ++A  +T MVHG E    A       F   +H   
Sbjct: 1   MSLEEINALEEEDKNSGKAPR-AQYVLAENVTGMVHGPEGLAAAKRITDSLFSGDLHDMT 59

Query: 334 ----QHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKL 389
                 +    +   E++R   L   +V A    S  +AR  + SNA+ IN    ++ + 
Sbjct: 60  EADFAQLAQDGMPTVELNRDADLQQALVNAELVPSRGQARTMIGSNAVAINGEKQADPEY 119

Query: 390 QIKLQDFDSTGNIKLSFGKKNHIIC 414
                D        L  GKK++ + 
Sbjct: 120 VFTDADRLFGRYTLLRRGKKHYCLI 144


>gi|297517664|ref|ZP_06936050.1| tyrosyl-tRNA synthetase [Escherichia coli OP50]
          Length = 135

 Score =  119 bits (300), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 33/132 (25%), Positives = 59/132 (44%), Gaps = 7/132 (5%)

Query: 289 KLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISIS 342
           K  GK    A+ ++A ++T +VHG E  + A       F  S+ +      + +    + 
Sbjct: 2   KNSGKAPR-AQCVLAEQVTRLVHGEEGLQAAKRITECLFSGSLSALSEADFEQLAQDGVP 60

Query: 343 KDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNI 402
             E+ +G  L+  +V +    S  +AR+ + SNAI IN    S+ +   K ++       
Sbjct: 61  MVEMEKGADLMQALVDSELQPSRGQARKTIASNAITINGEKQSDPEYFFKEEERLFGRFT 120

Query: 403 KLSFGKKNHIIC 414
            L  GKKN+ + 
Sbjct: 121 LLRRGKKNYCLI 132


>gi|323695191|ref|ZP_08109315.1| tyrosine-tRNA ligase [Clostridium symbiosum WAL-14673]
 gi|323500753|gb|EGB16691.1| tyrosine-tRNA ligase [Clostridium symbiosum WAL-14673]
          Length = 131

 Score =  117 bits (294), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 39/128 (30%), Positives = 71/128 (55%), Gaps = 3/128 (2%)

Query: 290 LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVS-R 348
           ++G ++N AK+I+A E+T +VHG  EAEKA  A+   F    ++  MPT  +++++ +  
Sbjct: 1   MEGSQLNTAKEILAFELTNLVHGEAEAEKAKEASRALFTSG-NAADMPTAELTEEDFNGD 59

Query: 349 GMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGK 408
            + +LT++ K+G A S +EARR+++   + ++   + + K           G I +  GK
Sbjct: 60  EIDILTILQKSGLAPSRSEARRNVEQGGVAVDGEAVKDSKAVFTKAQLSGDG-IVVKRGK 118

Query: 409 KNHIICHL 416
           KN     L
Sbjct: 119 KNFKKVIL 126


>gi|307069546|ref|YP_003878023.1| tyrosyl-tRNA synthetase [Candidatus Zinderia insecticola CARI]
 gi|306482806|gb|ADM89677.1| tyrosyl-tRNA synthetase [Candidatus Zinderia insecticola CARI]
          Length = 324

 Score =  116 bits (292), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 54/246 (21%), Positives = 101/246 (41%), Gaps = 27/246 (10%)

Query: 40  IGYDLTASSLHAGHLTQLMLLFWLQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQE 98
           +G+D T   +H GH   L  +  ++K        ++G  TSIIGDP+ + ++R  ++ + 
Sbjct: 36  LGFDPTNFKIHLGHYFLLKKIKNIKKIKLFNINIIIGNFTSIIGDPTGKKKTRYFLKYKN 95

Query: 99  IQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
           I  N +     F  F+      +   +  N  W    K    +  + S F++N+++  ++
Sbjct: 96  IINNSKIYLLQFGIFLNI----SKINIYYNSKWNILFKIKYFINLL-SKFTLNKIIERKN 150

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
              R+K ++ +   E  Y I+QAYD V L  +    L++GG DQ  N+     L +++  
Sbjct: 151 FMKRIKNKKPIYLHEIIYSIIQAYDSVILDSD----LEIGGIDQKFNLFFSRKLQKKINK 206

Query: 219 PKLFALTSPLLTTASGTKMGKTLS--------GAIWLNKEMTSPYNFWQYWRNIDDADVV 270
            K   L  P +         K+L+                  +    +    NI D  + 
Sbjct: 207 KKQSILMFPFI---------KSLNFKKKMSKSNKKNNININDNYNIIFLKLMNISDNIMF 257

Query: 271 SFAKRL 276
            +   L
Sbjct: 258 HYYNLL 263


>gi|163784933|ref|ZP_02179691.1| tyrosyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
 gi|159879801|gb|EDP73547.1| tyrosyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
          Length = 128

 Score =  115 bits (289), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 33/113 (29%), Positives = 53/113 (46%), Gaps = 3/113 (2%)

Query: 16  GFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMG 75
           G I  IS    ++ L     +    G+D TA  LH GH   L  L   Q+ GH    ++G
Sbjct: 19  GTIEIISEEELVEKLKEGRPLIVKAGFDPTAPDLHLGHTVLLQKLRTFQQLGHTVYFIIG 78

Query: 76  GGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
             T++IGDPS RD++R  +  +++ EN +  K       K    +   ++ N+
Sbjct: 79  DFTAMIGDPSGRDKTRPPLTKEQVFENAKTYKEQ---VFKVLDPEKTVVVFNS 128


>gi|94502284|ref|ZP_01308765.1| tyrosyl-tRNA synthetase [Candidatus Sulcia muelleri str. Hc
          (Homalodisca coagulata)]
 gi|94451163|gb|EAT14107.1| tyrosyl-tRNA synthetase [Candidatus Sulcia muelleri str. Hc
          (Homalodisca coagulata)]
          Length = 90

 Score =  114 bits (285), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 33/93 (35%), Positives = 53/93 (56%), Gaps = 4/93 (4%)

Query: 1  MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
          M  F  + +  L  RG IH  +   ++       ++T Y G+D T  SLH G+L  +++L
Sbjct: 1  MNNFNLNLIQELLWRGLIHDTTYSEQIK----NEIITLYTGFDPTYKSLHIGNLVAIIML 56

Query: 61 FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRM 93
             QK+G+  IS++GGGT +IGDPS ++  R +
Sbjct: 57 IHFQKSGNNIISVIGGGTGMIGDPSGKNCERIL 89


>gi|156186012|gb|ABU55324.1| tyrosyl-tRNA synthetase [Callosobruchus chinensis]
          Length = 104

 Score =  113 bits (283), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 53/102 (51%), Positives = 75/102 (73%)

Query: 82  GDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLL 141
           GDPSF+D++R ++  + I +N   I+ I    + +   KT A+++NN  WL +IKYID L
Sbjct: 3   GDPSFKDKARSILPVENINQNTSSIRRILEKMMSFXDSKTGAMIVNNXDWLDNIKYIDFL 62

Query: 142 REIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            +IG++FSVNRMLSF+SV++RL REQ+L FLE NYM+ QAYD
Sbjct: 63  GDIGAYFSVNRMLSFDSVKTRLDREQTLXFLEXNYMLXQAYD 104


>gi|99035959|ref|ZP_01315004.1| hypothetical protein Wendoof_01000165 [Wolbachia endosymbiont of
           Drosophila willistoni TSC#14030-0811.24]
          Length = 111

 Score =  112 bits (281), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 39/111 (35%), Positives = 62/111 (55%), Gaps = 1/111 (0%)

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           +T + HG +EAE A  AA+  F+ +  S  +P   I K++V+ G+ L+ L+   GF  S 
Sbjct: 1   MTKICHGDKEAELAQFAAISAFE-NEDSSLLPDYIIKKEQVASGISLVDLLHDTGFEPSK 59

Query: 366 NEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
             A+R ++ N  KIN+++++N    I  + F     IKLS GKK HI   +
Sbjct: 60  GAAKRLIQGNGCKINDNVVNNIDHVINFESFKDQPFIKLSAGKKRHIKVVV 110


>gi|297184523|gb|ADI20636.1| tyrosyl-tRNA synthetase [uncultured gamma proteobacterium
           EF100_93H11]
          Length = 125

 Score =  112 bits (281), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 28/108 (25%), Positives = 45/108 (41%), Gaps = 6/108 (5%)

Query: 226 SPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI 284
            PLL    G  KM K+L  AI + +    P   +    +I D  +  + + L+   + EI
Sbjct: 1   MPLLEGLDGVQKMSKSLGNAIGITEP---PAEMFGKLMSISDDLMWRYFELLSFRSVVEI 57

Query: 285 D--RMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMS 330
              R +  +G    + K  +A EI T  H +  A++A  A    F   
Sbjct: 58  RALRRSTEEGTNPRDVKYELALEIVTRFHSKSAADRAKQAFCRSFSER 105


>gi|291458843|ref|ZP_06598233.1| tyrosine--tRNA ligase [Oribacterium sp. oral taxon 078 str.
          F0262]
 gi|291418097|gb|EFE91816.1| tyrosine--tRNA ligase [Oribacterium sp. oral taxon 078 str.
          F0262]
          Length = 88

 Score =  110 bits (275), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 30/73 (41%), Positives = 44/73 (60%)

Query: 7  DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
               L ERG I Q+++  ++  L + G    YIG+D TA SLH GH   L L+  LQ+ 
Sbjct: 16 GVFEELRERGLIAQLTDEEKIRELINAGKAVFYIGFDPTADSLHVGHFMALCLMKRLQEA 75

Query: 67 GHKPISLMGGGTS 79
          G++PI+L+GGG +
Sbjct: 76 GNRPIALVGGGPA 88


>gi|126350782|ref|XP_001381906.1| PREDICTED: hypothetical protein, partial [Monodelphis domestica]
          Length = 161

 Score =  109 bits (274), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 59/157 (37%), Gaps = 13/157 (8%)

Query: 272 FAKRLTTLPMSEIDRMAKLQ--GKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDM 329
           + K  T LP+ EI+ + ++     E    +  +ATE+T  VHG+E    A       +  
Sbjct: 1   YLKLFTFLPLPEIEHIMQMHMKAPEKRGPQIRLATEVTKFVHGQEGLGSAKRCTQALYHC 60

Query: 330 SIHSQHM----------PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKI 379
           SI +  +               S+  +  G  +L    KA          + +    + I
Sbjct: 61  SIDALEIMSDEELKELFKEAPFSELVLEPGTSVLDTCRKANAIPDGPRGYQMITEGGVSI 120

Query: 380 NNSIISNEKLQIKL-QDFDSTGNIKLSFGKKNHIICH 415
           N+  ++N +  + + +     G   L  GK+N  +  
Sbjct: 121 NHKPVTNPESVLVVGEHILKNGLSLLKIGKRNFYVIK 157


>gi|297172371|gb|ADI23346.1| tyrosyl-tRNA synthetase [uncultured Oceanospirillales bacterium
           HF0770_27O18]
          Length = 173

 Score =  109 bits (273), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 68/182 (37%), Gaps = 12/182 (6%)

Query: 237 MGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--E 294
           M K+L   + +N    +P   ++   +I D     + + L+ L    ++       +   
Sbjct: 1   MSKSLKNYVGVN---DAPGEMYRKLLSIPDDMTWRYYELLSGLSNEALEERKAEAERLGS 57

Query: 295 INEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLT 354
             EAKK  A E+ T  HG   A+ A ++A     +     ++        E    + ++ 
Sbjct: 58  PQEAKKAFALEMVTRFHGEAAAQAAPSSAGNLTALGAIPDNV-PEVEVVLEEGDEVHVVP 116

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           L+  AG A +   A+      A+ ++   ++ E+       F    +  +  GKK     
Sbjct: 117 LLRLAGLAQNGKAAKDVFGRGAVYVDGQQLTEERT------FARGESAVIQAGKKKIARV 170

Query: 415 HL 416
            +
Sbjct: 171 TI 172


>gi|229543048|ref|ZP_04432108.1| RNA-binding S4 domain protein [Bacillus coagulans 36D1]
 gi|229327468|gb|EEN93143.1| RNA-binding S4 domain protein [Bacillus coagulans 36D1]
          Length = 103

 Score =  106 bits (264), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 21/107 (19%), Positives = 45/107 (42%), Gaps = 8/107 (7%)

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
           M HG   A +A       F       H+P +    D   + + ++ L+V+     S +EA
Sbjct: 1   MYHGEAAAVQAEENFKNVFQKGALPAHIPAMRWDGD---KTINIIDLLVQLKLQPSKSEA 57

Query: 369 RRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           R+ +++  I+IN   +++    + + D      + +  GK+  +   
Sbjct: 58  RKMIQNGGIRINGEKVNDIHDAVHVTD-----GLIIQVGKRKFVKLQ 99


>gi|255030759|ref|ZP_05302710.1| tyrosyl-tRNA synthetase [Listeria monocytogenes LO28]
          Length = 117

 Score =  105 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 24/118 (20%), Positives = 41/118 (34%), Gaps = 14/118 (11%)

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLI 356
           T  VH  E  E+A   +   F   + +          + +PT      E      L+  +
Sbjct: 1   TKFVHSEEALEQALKISKALFSGDVKALTADEIEQGFKDVPTFVAEDSE----ANLVDWL 56

Query: 357 VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           V  G   S  +AR  + + AI IN     + +  +   D        +  GKK + + 
Sbjct: 57  VTLGIEPSKRQAREDVGNGAIYINGERQQDLEKIMDASDRIENKFTIVRRGKKKYFLV 114


>gi|213422061|ref|ZP_03355127.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
          serovar Typhi str. E01-6750]
          Length = 62

 Score =  105 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 23/59 (38%), Positives = 33/59 (55%)

Query: 6  SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
          S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH GHL  L+ L   Q
Sbjct: 4  SNLIKQLQERGLVAQVTDEDALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQ 62


>gi|14589325|emb|CAC43232.1| tyrosyl-tRNA synthetase [Mycobacterium smegmatis]
          Length = 354

 Score =  103 bits (258), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 34/92 (36%), Positives = 54/92 (58%), Gaps = 3/92 (3%)

Query: 229 LTTASGTKMGKT-LSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRM 287
           + T S  K GK+   G +WL++EMTSPY ++QY+ N  DADV+ + +  T L   E+  +
Sbjct: 144 VGTDSRQKFGKSTGGGNLWLDREMTSPYAWYQYFVNSPDADVLGYLRWFTFLTPDELAEL 203

Query: 288 AKLQGKEINE--AKKIIATEITTMVHGREEAE 317
           A       +E  A++ +A E+TT+VHG    +
Sbjct: 204 ADATENRPHERAAQRRLARELTTLVHGEGATK 235


>gi|325528769|gb|EGD05830.1| tyrosyl-tRNA synthetase [Burkholderia sp. TJI49]
          Length = 113

 Score =  103 bits (257), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 28/94 (29%), Positives = 44/94 (46%), Gaps = 5/94 (5%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           K     +L E  F  +++         +   +   +G D TA  +H GH   L  +  LQ
Sbjct: 25  KRGVDELLIEEEFAQKLA-----RSAATGTPLRIKLGLDPTAPDIHIGHTVVLNKMRQLQ 79

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQE 98
             GH  I L+G  TS+IGDPS R+ +R  +  ++
Sbjct: 80  DLGHTVIFLIGDFTSLIGDPSGRNATRPPLTREQ 113


>gi|207110502|ref|ZP_03244664.1| tyrosyl-tRNA synthetase [Helicobacter pylori HPKX_438_CA4C1]
          Length = 99

 Score =  102 bits (256), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 32/108 (29%), Positives = 55/108 (50%), Gaps = 11/108 (10%)

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGF 361
           +A EI    +  E+A KA     + F  ++    +P I +S+ +   G+G+L ++ + GF
Sbjct: 2   LAGEIVARYYDNEQAIKAKEQFSKVFSANL----LPEI-LSESDFDEGVGILDVLKQIGF 56

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
             ST++ARR ++   +KIN  +I NE  +         GN  +  GKK
Sbjct: 57  CPSTSQARRDIQGGGVKINQEVIKNESYRFVK------GNYVIQLGKK 98


>gi|33322947|gb|AAQ07210.1|AF496518_1 tyrosyl-tRNA synthetase 1 [Lactobacillus delbrueckii subsp. lactis]
          Length = 69

 Score = 99.5 bits (247), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 36/69 (52%), Positives = 46/69 (66%), Gaps = 2/69 (2%)

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGTKMGKTLSGAIWLN 248
           +  ++Q+GG+DQWGNI  GIDL  RL+      F LT PL+  A GTK GK+  GA+WL+
Sbjct: 1   HGVQMQIGGADQWGNITAGIDLIHRLEGADRPAFGLTIPLMLKADGTKFGKSAGGAVWLD 60

Query: 249 KEMTSPYNF 257
            E TSPY F
Sbjct: 61  PEKTSPYEF 69


>gi|270011291|gb|EFA07739.1| hypothetical protein TcasGA2_TC002219 [Tribolium castaneum]
          Length = 148

 Score = 99.5 bits (247), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 34/145 (23%), Positives = 64/145 (44%), Gaps = 12/145 (8%)

Query: 234 GTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG- 292
           G K GK+   A+WL+ E TSP+  +Q++    D +V    K  T  P+  I  + +    
Sbjct: 2   GDKFGKSAGNAMWLSAEKTSPFTLYQFFVRQVDTEVEKMLKFFTFEPVGSIKDLMRRHTE 61

Query: 293 -KEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSI------HSQHMPTI----SI 341
             E+   +K +A ++  +VHG +  E A  A    ++ SI      +   + ++    ++
Sbjct: 62  KPELRLPQKYLAEQVVLLVHGEKGLEAAHKATKVLYERSITALAEMNPLEIKSLFEGATV 121

Query: 342 SKDEVSRGMGLLTLIVKAGFATSTN 366
            +     G  +L L + AG   +  
Sbjct: 122 VEILPEPGQSVLDLAMSAGCFLTKG 146


>gi|143468|gb|AAA22718.1| transfer RNA-Tyr synthetase [Bacillus subtilis]
          Length = 95

 Score = 98.7 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 15/87 (17%), Positives = 41/87 (47%), Gaps = 3/87 (3%)

Query: 328 DMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNE 387
           D+ +  + +P++ +     ++ + L+ ++V++  + S  +AR  +++ A+ IN    +  
Sbjct: 9   DVKVGFKDVPSMEVDS---TQELSLVDVLVQSKLSPSKRQAREDIQNGAVYINGERQTEI 65

Query: 388 KLQIKLQDFDSTGNIKLSFGKKNHIIC 414
              +  +D        L  GKK + + 
Sbjct: 66  NYTLSGEDRIENQFTVLRRGKKKYFLV 92


>gi|268325083|emb|CBH38671.1| tyrosyl-tRNA synthetase [uncultured archaeon]
          Length = 334

 Score = 98.3 bits (244), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 56/250 (22%), Positives = 100/250 (40%), Gaps = 21/250 (8%)

Query: 2   PAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
              +S+ + IL ER     I+     ++L S+    AY+GY+ +   +H GHL  L  L 
Sbjct: 16  TMTESEPMRIL-ERNVEELITKGELEEVLSSKKKPRAYVGYEPSGR-VHIGHLPILNKLK 73

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKT 121
            LQ+ G   I L+    + + +             ++IQE  E  K  F++    G    
Sbjct: 74  ELQRFGFHIIVLLADLHAYLNEKG---------SLEQIQETAEYNKRCFAAA---GLSDE 121

Query: 122 DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA 181
              +  +   L +   +++L+            S + + SR K ++ +S     Y ++QA
Sbjct: 122 TEFIFGSSFQLDNEYMMNVLKLATVTTEKRAKRSMDEL-SRSKEDRKVSQT--IYPLMQA 178

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            D   L    D  + +GG DQ    +   +   +L       +  PLL    G KM  +L
Sbjct: 179 VDIAYL----DIDVAVGGIDQRKIHMLSRENIPKLGFKAPICIHMPLLIGLDGEKMSSSL 234

Query: 242 SGAIWLNKEM 251
              I +++  
Sbjct: 235 GNYIAVDEPA 244


>gi|284161190|ref|YP_003399813.1| tyrosyl-tRNA synthetase [Archaeoglobus profundus DSM 5631]
 gi|284011187|gb|ADB57140.1| tyrosyl-tRNA synthetase [Archaeoglobus profundus DSM 5631]
          Length = 322

 Score = 98.3 bits (244), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 52/237 (21%), Positives = 99/237 (41%), Gaps = 23/237 (9%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            L +R  +  ++    L++L ++    AY+GY+ +   +H GH+  +  L  LQ+ G + 
Sbjct: 8   QLIKRNAVEIVTEEELLELLQTKEKPRAYVGYEPSGE-IHLGHMMTVQKLIDLQQAGFEI 66

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           + L+    + + +    DE R++    +             +FI  G  ++ A  +    
Sbjct: 67  VVLLADVHAYLNEKGDFDEIRKIADFNK------------KAFIALGLDESKAKFVLGSE 114

Query: 131 W-LCSIKYIDLLREIGSFFSVNRML-SFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
           + L     +D+L+ +    +VNR   S + V  R  +E  +   +  Y ++QA D   L 
Sbjct: 115 YQLERDYVLDVLK-MARITTVNRARRSMDEVSRR--KEDPM-VSQMIYPLMQALDIAHL- 169

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
                 L +GG+DQ    +   +   RL       L +P+L    G KM  +    I
Sbjct: 170 ---GVDLAVGGTDQRKIHMLARENLPRLGYKAPICLHTPILLGLDGQKMSSSKGNYI 223


>gi|11066479|gb|AAG28601.1|AF247185_1 tyrosyl tRNA synthetase [Rhizobium etli]
          Length = 64

 Score = 98.0 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 38/64 (59%), Positives = 47/64 (73%)

Query: 1  MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
          M  FKSDFL  L ERGFIHQ+S+   LD L ++ VVTAY+GYD TA+SLH G+L    +L
Sbjct: 1  MSEFKSDFLRTLKERGFIHQVSDESGLDDLFAKEVVTAYVGYDATATSLHIGNLISATML 60

Query: 61 FWLQ 64
          +WLQ
Sbjct: 61 YWLQ 64


>gi|52549026|gb|AAU82875.1| tyrosyl-tRNA synthetase [uncultured archaeon GZfos21B5]
          Length = 318

 Score = 97.6 bits (242), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 55/247 (22%), Positives = 100/247 (40%), Gaps = 21/247 (8%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           +S+ + IL ER     I+     ++L S+    AY+GY+ +   +H GHL  L  L  LQ
Sbjct: 3   ESEPMRIL-ERNVEELITKDELEEVLSSKKKPRAYVGYEPSGR-VHIGHLPILNKLKELQ 60

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           + G   I L+    + + +             ++I+E  E  K  F++    G       
Sbjct: 61  RFGFHIIVLLADLHAYLNEKG---------SLEQIRETAEYNKRCFAAA---GLSDETEF 108

Query: 125 MLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
           +  +   L +   +++L+            S + + SR K ++ +S     Y ++QA D 
Sbjct: 109 IFGSSFQLDNEYMMNVLKLATVTTEKRAKRSMDEL-SRSKEDRKVSQT--IYPLMQAVDI 165

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L    D  + +GG DQ    +   +   +L       +  PLL    G KM  +L   
Sbjct: 166 AYL----DIDVAVGGIDQRKIHMLSRENIPKLGFKAPICIHMPLLIGLDGEKMSSSLGNY 221

Query: 245 IWLNKEM 251
           I +++  
Sbjct: 222 IAVDEPA 228


>gi|327401473|ref|YP_004342312.1| Tyrosyl-tRNA synthetase [Archaeoglobus veneficus SNP6]
 gi|327316981|gb|AEA47597.1| Tyrosyl-tRNA synthetase [Archaeoglobus veneficus SNP6]
          Length = 329

 Score = 97.6 bits (242), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 51/236 (21%), Positives = 90/236 (38%), Gaps = 23/236 (9%)

Query: 12  LSERGFIHQISNPRELDILCS-QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           L  R  +  ++   EL  L        AY+GY+ +   +H GHL  +  L  LQ  G   
Sbjct: 9   LVTRNAVEIVT-EDELRTLLETNEKPRAYVGYEPSGE-IHLGHLMTVNKLIDLQNAGFDV 66

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           + L+    + + +             +EI+   E         +     KT+ ++ ++  
Sbjct: 67  VVLLADVHAYLNEKGDF---------EEIERIAE-YNKQAFIALGLEENKTEFVLGSSYQ 116

Query: 131 WLCSIKYIDLLREIGSFFSVNRML-SFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
            L     +D+L+ +    ++NR   S + V  R  +E  +   +  Y ++QA D   L  
Sbjct: 117 -LSRDYVLDVLK-MARITTLNRARRSMDEVSRR--KEDPM-VSQMVYPLMQALDIAHLK- 170

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
                L +GG DQ    +   +   RL       L +P+L    G KM  +    I
Sbjct: 171 ---IDLAVGGMDQRKIHMLARENLPRLGYLSPVCLHTPILLGLDGQKMSSSKGNYI 223


>gi|20150424|pdb|1JH3|A Chain A, Solution Structure Of Tyrosyl-Trna Synthetase C-Terminal
           Domain
          Length = 107

 Score = 97.2 bits (241), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 18/99 (18%), Positives = 36/99 (36%), Gaps = 6/99 (6%)

Query: 325 ECFDMSIHSQHMPTISISKDEVS------RGMGLLTLIVKAGFATSTNEARRHLKSNAIK 378
             F   I +     I     +V         + L+ L+V AG + S  +AR  +++ AI 
Sbjct: 1   ALFSGDIANLTAAEIEQGFKDVPSFVHEGGDVPLVELLVSAGISPSKRQAREDIQNGAIY 60

Query: 379 INNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           +N   + +    +  +         +  GKK + +    
Sbjct: 61  VNGERLQDVGAILTAEHRLEGRFTVIRRGKKKYYLIRYA 99


>gi|11498382|ref|NP_069610.1| tyrosyl-tRNA synthetase [Archaeoglobus fulgidus DSM 4304]
 gi|3122912|sp|O29482|SYY_ARCFU RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|83754904|pdb|2CYB|A Chain A, Crystal Structure Of Tyrosyl-Trna Synthetase Complexed
           With L-Tyrosine From Archaeoglobus Fulgidus
 gi|83754905|pdb|2CYB|B Chain B, Crystal Structure Of Tyrosyl-Trna Synthetase Complexed
           With L-Tyrosine From Archaeoglobus Fulgidus
 gi|2649832|gb|AAB90462.1| tyrosyl-tRNA synthetase (tyrS) [Archaeoglobus fulgidus DSM 4304]
          Length = 323

 Score = 96.8 bits (240), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 62/330 (18%), Positives = 112/330 (33%), Gaps = 57/330 (17%)

Query: 19  HQISNPRELDILCS-QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGG 77
            ++    EL  L   +    AY+GY+ +   +H GH+  +  L  LQ+ G + I L+   
Sbjct: 15  EEVVTEEELRQLIETKEKPRAYVGYEPSGE-IHLGHMMTVQKLMDLQEAGFEIIVLLADI 73

Query: 78  TSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW-LCSIK 136
            + + +             +EI E  +  K +   FI  G  ++ A  +    + L    
Sbjct: 74  HAYLNEKG---------TFEEIAEVADYNKKV---FIALGLDESRAKFVLGSEYQLSRDY 121

Query: 137 YIDLLREIGSFFSVNRML-SFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRL 195
            +D+L+ +    ++NR   S + V  R  +E  +   +  Y ++QA D   L       L
Sbjct: 122 VLDVLK-MARITTLNRARRSMDEVSRR--KEDPM-VSQMIYPLMQALDIAHL----GVDL 173

Query: 196 QMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPY 255
            +GG DQ    +   +   RL       L +P+L    G KM  +    I        P 
Sbjct: 174 AVGGIDQRKIHMLARENLPRLGYSSPVCLHTPILVGLDGQKMSSSKGNYI---SVRDPPE 230

Query: 256 NFWQYWRNI----------DDADVVSFAKRLTT-----------------LPMSEIDRMA 288
              +  R               D+  +                           E+    
Sbjct: 231 EVERKIRKAYCPAGVVEENPILDIAKYHILPRFGKIVVERDAKFGGDVEYASFEELAEDF 290

Query: 289 KLQGKEINEAKKIIATEITTMVHGREEAEK 318
           K       + K  +A  +  ++   E+A K
Sbjct: 291 KSGQLHPLDLKIAVAKYLNMLL---EDARK 317


>gi|56808834|ref|ZP_00366547.1| COG0162: Tyrosyl-tRNA synthetase [Streptococcus pyogenes M49 591]
          Length = 64

 Score = 96.8 bits (240), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 24/63 (38%), Positives = 35/63 (55%)

Query: 7  DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
          +    L  RG + Q ++ + L    ++G V+ Y GYD TA SLH GHL  ++    LQ+ 
Sbjct: 2  NIFEELKTRGLVFQTTDEQALVKALTEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQRA 61

Query: 67 GHK 69
          GHK
Sbjct: 62 GHK 64


>gi|88603704|ref|YP_503882.1| tyrosyl-tRNA synthetase [Methanospirillum hungatei JF-1]
 gi|108861904|sp|Q2FNA1|SYY_METHJ RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|88189166|gb|ABD42163.1| tyrosyl-tRNA synthetase [Methanospirillum hungatei JF-1]
          Length = 313

 Score = 96.4 bits (239), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 54/320 (16%), Positives = 109/320 (34%), Gaps = 47/320 (14%)

Query: 15  RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLM 74
           R  +  +++   L  L  + V   Y GY+ +   +H GHL  +  L  L+  G +   L+
Sbjct: 9   RNTVEVVTDEE-LRSLLDRPVRKVYAGYEPSGE-IHLGHLVTINKLIDLRDAGFEVTVLL 66

Query: 75  GGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCS 134
               + +          R    +E+++  E  +  F      G G TD   +   ++  S
Sbjct: 67  ADLHAFLN---------RKGTMEEVKKLAEYNRRCFE-----GLGLTDIKYVLGSSFQLS 112

Query: 135 IKYIDLLREIGSFFSVNRML-SFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDC 193
            +Y  L+ E+    ++NR   S + V  ++      +  +  Y I+Q  D   L      
Sbjct: 113 PEYQILVHELSQAITLNRAKRSMDEVGRQMDNP---TVSQMVYPIMQMADIAML----GV 165

Query: 194 RLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTS 253
              +GG DQ    +   +       P    +  P+L    G KM  +    I + +    
Sbjct: 166 DAALGGIDQRKIHMLAREYLPSKNYPSPVCIHVPILQGLDGKKMSSSQGNYISVAESEED 225

Query: 254 PYNFWQYWR---NIDDADVVSFA----------------KRL----TTLPMSEIDRMAKL 290
                +       ++D  V+                   ++     T     E+++    
Sbjct: 226 IRKKMKKAFCPPEVEDNPVLQVLQHHIFPRLDTVTIERPEKFGGNRTFGSYEEMEQAYAK 285

Query: 291 QGKEINEAKKIIATEITTMV 310
                 + K  +A  + T++
Sbjct: 286 GEIHPADLKTAVAESLITIL 305


>gi|207108556|ref|ZP_03242718.1| tyrosyl-tRNA synthetase [Helicobacter pylori HPKX_438_CA4C1]
          Length = 107

 Score = 96.0 bits (238), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 23/73 (31%), Positives = 41/73 (56%)

Query: 32  SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESR 91
           +        G+D TA  LH GH   +  L  LQ+ G +   L+G  T++IGDP+ ++E+R
Sbjct: 35  TNERFIVKAGFDPTAPDLHLGHTVLIQKLALLQQYGARVKFLIGDFTAMIGDPTGKNETR 94

Query: 92  RMMRSQEIQENIE 104
           + +  +++ EN +
Sbjct: 95  KPLNREQVLENAK 107


>gi|330955950|gb|EGH56210.1| tyrosyl-tRNA synthetase [Pseudomonas syringae Cit 7]
          Length = 116

 Score = 95.7 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 28/123 (22%), Positives = 45/123 (36%), Gaps = 9/123 (7%)

Query: 295 INEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLT 354
             + K  +A E+    HG E A  A  +A            +P IS++  E    M +  
Sbjct: 1   PRDIKIKLAEELVARFHGEEAAANAHRSAGNRMKEGELPDDLPEISVAAAE---DMPISA 57

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           ++ KAG   +   AR  L S  ++I+  ++ +     KL             GKK     
Sbjct: 58  VLNKAGLVKNAAVARDLLASGGVRIDGEVV-DRSFVFKL-----GATHVCQAGKKAFGRV 111

Query: 415 HLC 417
            L 
Sbjct: 112 TLV 114


>gi|297185015|gb|ADI21124.1| tyrosyl-tRNA synthetase [uncultured gamma proteobacterium
           EB750_07C09]
          Length = 70

 Score = 94.5 bits (234), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 23/65 (35%), Positives = 31/65 (47%)

Query: 46  ASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEK 105
           A  LH GH   +  +   Q  GH  I L+G  T++IGDPS R+ +R  +   EI  N   
Sbjct: 5   APDLHLGHTVVINKMRQFQNFGHNVIFLIGDFTALIGDPSGRNVTRPPLTRDEIDANANT 64

Query: 106 IKGIF 110
            K   
Sbjct: 65  YKEQV 69


>gi|241157431|ref|XP_002408043.1| tyrosyl-tRNA synthetase, putative [Ixodes scapularis]
 gi|215494290|gb|EEC03931.1| tyrosyl-tRNA synthetase, putative [Ixodes scapularis]
          Length = 151

 Score = 94.5 bits (234), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 28/141 (19%), Positives = 49/141 (34%), Gaps = 17/141 (12%)

Query: 290 LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEV--- 346
            +  E   A+K +A +IT +VHG      A  A    F  S   + +    + ++E+   
Sbjct: 10  QKSPEKRVAQKRLAQDITLLVHGERGLSLAQNATEILFGGSRADETL--HRLDEEELRLI 67

Query: 347 -----------SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ- 394
                        G  +L + +KA    S  +A R + +    IN   ++     I    
Sbjct: 68  FGDAGFVQLAPEPGTTVLDMAMKARLFPSKEDAVRIISAGGFYINQHRVNAPSHVIVPGV 127

Query: 395 DFDSTGNIKLSFGKKNHIICH 415
                       GKKN+ +  
Sbjct: 128 HVLPNKITLARVGKKNYYLIK 148


>gi|82540397|ref|XP_724520.1| hypothetical protein [Plasmodium yoelii yoelii str. 17XNL]
 gi|23479187|gb|EAA16085.1| tyrosyl-tRNA synthetase 1-related [Plasmodium yoelii yoelii]
          Length = 173

 Score = 94.1 bits (233), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 41/117 (35%), Positives = 58/117 (49%), Gaps = 6/117 (5%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILC------SQGVVTAYIGYDLTASSLHAGHLTQL 57
            KS+ L  L ER  I+ IS+ + +D +       ++   + Y+G DL    LH G L QL
Sbjct: 55  IKSNALKKLYERKLINYISDLKNVDQILYDNENENENKKSVYLGIDLNCKYLHIGSLVQL 114

Query: 58  MLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFI 114
             L  L+      I L+G  T+ IGDPSF+   R+   + EI EN + IK     FI
Sbjct: 115 KTLEILRNYKTDVIILLGNSTTKIGDPSFQLNERKETLNDEICENEKNIKKSLIDFI 171


>gi|147919431|ref|YP_686830.1| tyrosyl-tRNA synthetase [uncultured methanogenic archaeon RC-I]
 gi|110622226|emb|CAJ37504.1| tyrosyl-tRNA synthetase [uncultured methanogenic archaeon RC-I]
          Length = 316

 Score = 93.7 bits (232), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 54/318 (16%), Positives = 98/318 (30%), Gaps = 44/318 (13%)

Query: 18  IHQISNPRELDILCSQGV-VTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGG 76
           + ++    EL  L         Y+GY+ + + +H GH+  +  L   Q  G +   L+  
Sbjct: 11  VEEVVTIDELKSLMDANPHPKVYVGYEPSGN-IHLGHMITVNKLIDCQNAGFEVTVLLAD 69

Query: 77  GTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIK 136
             + +          R    +EI +  E  K  F +     +      +L     L    
Sbjct: 70  LHAYLN---------RKGTMEEIAKIAEYNKRCFIAMG--LSEDRTRFVLGTSYQLSPKY 118

Query: 137 YIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQ 196
             D+LR            S + V      E      +  Y ++QA D   L    D  + 
Sbjct: 119 ETDVLRLACDTTLNRARRSMDEVSR--DAEDP-RVSQMVYPLMQALDIAYL----DVDVA 171

Query: 197 MGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKE------ 250
           MGG DQ    +   +    L       L +P+L    GTKM  +    I +++       
Sbjct: 172 MGGIDQRKIHMLARESLPSLGYKSPICLHTPILLGLDGTKMSSSKGNNISVDEPAESVTK 231

Query: 251 ----MTSP--------------YNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG 292
                  P              Y+ +  + +I           +T      +      + 
Sbjct: 232 KIEKAFCPIGVTENNPVLDLFRYHIFMKYDSITIERPEKHGGNITFDSYEALRNDFAEKK 291

Query: 293 KEINEAKKIIATEITTMV 310
               + KK  A  +  ++
Sbjct: 292 VHPMDLKKAAAKYMNQIL 309


>gi|289524532|ref|ZP_06441386.1| tyrosine--tRNA ligase [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
 gi|289502227|gb|EFD23391.1| tyrosine--tRNA ligase [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
          Length = 65

 Score = 91.8 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 29/62 (46%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            ++V  G   S +EARR ++S  + +N   +  E  ++   +F     + L  GKK + +
Sbjct: 2   DVLVHVGACASKSEARRLIRSGGVSLNGERVDEENYEVDSDNFLYGKYMLLKLGKKRYHL 61

Query: 414 CH 415
             
Sbjct: 62  VE 63


>gi|219853337|ref|YP_002467769.1| tyrosyl-tRNA synthetase [Methanosphaerula palustris E1-9c]
 gi|219547596|gb|ACL18046.1| tyrosyl-tRNA synthetase [Methanosphaerula palustris E1-9c]
          Length = 316

 Score = 91.4 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 48/240 (20%), Positives = 89/240 (37%), Gaps = 24/240 (10%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R  +  +++   L  L  +     Y GY+ +   +H GHL  +  L  L+K G + +
Sbjct: 6   LVTRNTVEVVTDEE-LSALLKKPGRKVYAGYEPSGE-VHLGHLVTVNKLLDLKKVGFEIV 63

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+    + +          R    +E++   E  +  F      G G  D   +     
Sbjct: 64  VLLADLHAFLN---------RKGTMEEVRTLAEYNRKCFE-----GLGLVDVTYVLGSDL 109

Query: 132 LCSIKYIDLLREIGSFFSVNRML-SFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
             S +Y  L+ +I    ++NR   S + V  +++     +  +  Y I+Q  D   L   
Sbjct: 110 QLSPEYELLMLKISQEVTLNRATRSMDEVGRQMEHP---TVSQMVYPIMQITDIATL--- 163

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKE 250
                 +GG DQ    +   +       P    L +P+L    G KM  +    I + ++
Sbjct: 164 -GVDAAVGGIDQRKIHMLAREYLPGHGYPTPVCLHTPILNGLDGKKMSSSQKNYISVAED 222


>gi|256810829|ref|YP_003128198.1| tyrosyl-tRNA synthetase [Methanocaldococcus fervens AG86]
 gi|256794029|gb|ACV24698.1| tyrosyl-tRNA synthetase [Methanocaldococcus fervens AG86]
          Length = 306

 Score = 91.0 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 55/317 (17%), Positives = 106/317 (33%), Gaps = 54/317 (17%)

Query: 19  HQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGT 78
            +I +  EL  +  +   +AYIG++ +   +H GH  Q+  +  LQ  G   I L+    
Sbjct: 12  AEIVSEEELKEVLKKDEKSAYIGFEPSGK-IHLGHYLQIKKMIDLQNAGFDIIILLADLH 70

Query: 79  SIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYI 138
           + +      DE R      EI E   ++        KY  G            L     +
Sbjct: 71  AYLNQKGELDEIR------EIGEYNRRVFEAMGLKAKYVYGSEFQ--------LDKDYTL 116

Query: 139 DLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMG 198
           ++ R            S E +   ++  +     E  Y I+Q  D   L       + +G
Sbjct: 117 NVYRLALKTTLKRARRSMELIAREVENPK---VAEVIYPIMQVNDIHYL----GVDVAVG 169

Query: 199 GSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNF 257
           G +Q    +   +L       K+  + +P+LT   G  KM  +    I ++    +P + 
Sbjct: 170 GMEQRKIHMLARELLP----KKVVCIHNPVLTGLDGEGKMSSSKGNFIAVD---DTPEDI 222

Query: 258 WQYWRNI----------DDADVVSFAKR--LTTL------------PMSEIDRMAKLQGK 293
               +               ++  +     LT                 E++R+   +  
Sbjct: 223 RAKVKKAYCPAGVVEGNPIMEIAKYFLEYPLTIKRPEKFGGDLVVNSYEELERLFINKEL 282

Query: 294 EINEAKKIIATEITTMV 310
              + K  +A E+  ++
Sbjct: 283 HPMDLKNAVAEELIKIL 299


>gi|170061956|ref|XP_001866460.1| tyrosyl-tRNA synthetase [Culex quinquefasciatus]
 gi|167880031|gb|EDS43414.1| tyrosyl-tRNA synthetase [Culex quinquefasciatus]
          Length = 198

 Score = 91.0 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 32/153 (20%), Positives = 56/153 (36%), Gaps = 17/153 (11%)

Query: 280 PMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI 339
           P   I      +  E+ EA+K +A E+T +VHG E   KA   +   F  ++ +     +
Sbjct: 43  PAEAILMARHQRTPELWEAQKRLAQELTLLVHGEEGLRKAEDISDALFSGNVQALGELEV 102

Query: 340 ----------SISKDEVSRGMGLLTLIVKAGFATSTNE------ARRHLKSNAIKINNSI 383
                      + +     G+ +L + +KA    +  E      A R + +    IN + 
Sbjct: 103 RDIKQTFGGAPLVEILPEPGLSVLDVAMKAKCFRNEREDPILKDATRIIAAGGFSINLNK 162

Query: 384 ISNEKLQIKLQ-DFDSTGNIKLSFGKKNHIICH 415
             N    +         G   L  GK+N+ I  
Sbjct: 163 AKNVAEVLAPGVHILKNGISLLRVGKRNYYIVK 195


>gi|15668565|ref|NP_247363.1| tyrosyl-tRNA synthetase [Methanocaldococcus jannaschii DSM 2661]
 gi|2501077|sp|Q57834|SYY_METJA RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|31615439|pdb|1J1U|A Chain A, Crystal Structure Of Archaeal Tyrosyl-Trna Synthetase
           Complexed With Trna(Tyr) And L-Tyrosine
 gi|67464162|pdb|1U7D|A Chain A, Crystal Structure Of Apo M. Jannashii Tyrosyl-Trna
           Synthetase
 gi|67464163|pdb|1U7D|B Chain B, Crystal Structure Of Apo M. Jannashii Tyrosyl-Trna
           Synthetase
 gi|1591094|gb|AAB98375.1| tyrosyl-tRNA synthetase (trS) [Methanocaldococcus jannaschii DSM
           2661]
          Length = 306

 Score = 91.0 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 56/316 (17%), Positives = 105/316 (33%), Gaps = 54/316 (17%)

Query: 20  QISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTS 79
           +I +  EL  +  +   +AYIG++ +   +H GH  Q+  +  LQ  G   I L+    +
Sbjct: 13  EIISEEELREVLKKDEKSAYIGFEPSGK-IHLGHYLQIKKMIDLQNAGFDIIILLADLHA 71

Query: 80  IIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYID 139
            +      DE R+      I +  +K+        KY  G            L     ++
Sbjct: 72  YLNQKGELDEIRK------IGDYNKKVFEAMGLKAKYVYGSEFQ--------LDKDYTLN 117

Query: 140 LLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGG 199
           + R            S E +    + E      E  Y I+Q  D   L       + +GG
Sbjct: 118 VYRLALKTTLKRARRSMELIAR--EDENP-KVAEVIYPIMQVNDIHYL----GVDVAVGG 170

Query: 200 SDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFW 258
            +Q    +   +L       K+  + +P+LT   G  KM  +    I ++    SP    
Sbjct: 171 MEQRKIHMLARELLP----KKVVCIHNPVLTGLDGEGKMSSSKGNFIAVD---DSPEEIR 223

Query: 259 QYWRNI----------DDADVVSFAKR--------------LTTLPMSEIDRMAKLQGKE 294
              +               ++  +                 LT     E++ + K +   
Sbjct: 224 AKIKKAYCPAGVVEGNPIMEIAKYFLEYPLTIKRPEKFGGDLTVNSYEELESLFKNKELH 283

Query: 295 INEAKKIIATEITTMV 310
             + K  +A E+  ++
Sbjct: 284 PMDLKNAVAEELIKIL 299


>gi|282165094|ref|YP_003357479.1| tyrosyl-tRNA synthetase [Methanocella paludicola SANAE]
 gi|282157408|dbj|BAI62496.1| tyrosyl-tRNA synthetase [Methanocella paludicola SANAE]
          Length = 316

 Score = 90.6 bits (224), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 46/242 (19%), Positives = 86/242 (35%), Gaps = 21/242 (8%)

Query: 11  ILSERGFIHQISNPRELDILCSQGV-VTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
            L  R  + ++    EL  L  +    + Y+GY+ + + +H GH+  +  L   Q  G K
Sbjct: 5   ELVTRN-VEEVVTMDELKKLLEEKAHPSVYVGYEPSGN-VHLGHMITVNKLIDCQNAGFK 62

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
              L+    + +          R     EI++  E  K  F +     + +    +L + 
Sbjct: 63  VTVLLADLHAYLN---------RKGTMAEIEKIAEYNKRCFIALG--LSEENTRFVLGSS 111

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
             L     +++LR            S + V      E      +  Y ++Q+ D   L  
Sbjct: 112 YQLSPEYEMNVLRMACDTTLNRAKRSMDEVSR--DAEDP-HVSQMIYPLMQSMDIATL-- 166

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
             D  +  GG DQ    +   +    +       L +P+L    GTKM  +    I +++
Sbjct: 167 --DVDVAAGGIDQRKIHMIAREQLPTMGFKSPVCLHTPILLGLDGTKMSSSKGNNISVDE 224

Query: 250 EM 251
             
Sbjct: 225 PA 226


>gi|20089699|ref|NP_615774.1| tyrosyl-tRNA synthetase [Methanosarcina acetivorans C2A]
 gi|74551678|sp|Q8TSI1|SYY_METAC RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|19914628|gb|AAM04254.1| tyrosyl-tRNA synthetase [Methanosarcina acetivorans C2A]
          Length = 317

 Score = 90.6 bits (224), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 52/326 (15%), Positives = 113/326 (34%), Gaps = 47/326 (14%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            L  R     ++      +L ++    AY+GY+ +   +H GH+  +  L  LQK G K 
Sbjct: 5   ELIRRNVQEIVTEEELEGLLKNKEAPRAYVGYEPSGK-IHMGHVLTVNKLIDLQKAGFKI 63

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
             L+    + +          +    +E+++  +  +     FI  G  +     +    
Sbjct: 64  TVLLADVHAYLN---------KKGTLEEVRKIADYNRRC---FIALGLDEEQTDFVYGSD 111

Query: 131 W-LCSIKYIDLLREIGSFFSVNRM-LSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
           + L +   +++L+ +    ++NR   S + V   +      +  +  Y ++QA D   L 
Sbjct: 112 FQLGAEYMLNVLK-LSRAVTLNRAKRSMDEVGRAMDDP---TVSQMVYPLMQAIDIALL- 166

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
              +  + +GG DQ    +   +  + L       + +P+L    GTKM  +    I ++
Sbjct: 167 ---EVDVAVGGIDQRKIHMLARENLKSLGFETPICIHTPILLGLDGTKMASSKDNFISID 223

Query: 249 KEMTSPYNFWQY-WRNIDDADVVSFAKRL-----------------------TTLPMSEI 284
                 Y  ++  +  I D +                               T    +E+
Sbjct: 224 DTGEDIYRKFKKAFCKIGDVEENPILALFRYHIFPRYETVVIERPEKFGGDITYHSYAEM 283

Query: 285 DRMAKLQGKEINEAKKIIATEITTMV 310
           +     +     + K   A  I  ++
Sbjct: 284 ESNFIEEKVHPMDLKNAAAKYINEIL 309


>gi|307354935|ref|YP_003895986.1| tyrosyl-tRNA synthetase [Methanoplanus petrolearius DSM 11571]
 gi|307158168|gb|ADN37548.1| tyrosyl-tRNA synthetase [Methanoplanus petrolearius DSM 11571]
          Length = 316

 Score = 90.3 bits (223), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 46/236 (19%), Positives = 90/236 (38%), Gaps = 22/236 (9%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            L+ R  +  ++   EL  + +Q   + Y GY+ +   +H GHL  +  L  L+  G K 
Sbjct: 5   ELAIRNTVEVVT-EDELRAVMAQPEKSVYAGYEPSGE-IHLGHLVTINKLMDLRDAGFKV 62

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           + L+    + +                E++E  +  +  F +      GK    +L  + 
Sbjct: 63  VVLLANLHAFLNQKG---------TMDEVRELSDYNRRCFEAVG--LKGKGVEFVLGTDI 111

Query: 131 WLCSIKYIDLLREIGSFFSVNRML-SFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
            L S   +++LR +    ++NR   S + V   +   +     +  Y I+Q  D   L  
Sbjct: 112 QLTSEYELNVLR-LSQAITLNRAKRSMDEVGRNMDAPR---VSQMVYPIMQMVDIHTL-- 165

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
                + +GG DQ    +   +    +       + +P+L   +G KM  +    I
Sbjct: 166 --GVDMALGGIDQRKIHMLAREYLPTIGAKAPLCMHTPILNGLNGKKMSSSEGNYI 219


>gi|126180436|ref|YP_001048401.1| tyrosyl-tRNA synthetase [Methanoculleus marisnigri JR1]
 gi|158513244|sp|A3CYG9|SYY_METMJ RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|125863230|gb|ABN58419.1| tyrosyl-tRNA synthetase [Methanoculleus marisnigri JR1]
          Length = 315

 Score = 90.3 bits (223), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 46/236 (19%), Positives = 86/236 (36%), Gaps = 24/236 (10%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            L  R  +  +++   L  L  + V   Y GY+ +   +H GH+  +  L  LQ+ G + 
Sbjct: 5   ELVTRNTVEVVTDEE-LRALIDRPVRRVYTGYEPSGE-IHLGHMVTVNKLMDLQQAGFEV 62

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
             L+    + +          R    +EI+E  E  +  F      G G   A  +    
Sbjct: 63  TVLIADLHAFLN---------RKGTMEEIRETAEYNRRCFE-----GLGLRGANYVLGSD 108

Query: 131 WLCSIKYIDLLREIGSFFSVNRML-SFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
              + +Y   + E+    ++NR   S + V  ++      +  +  Y I+Q  D   L  
Sbjct: 109 VQLTPEYELAVLELSQAITLNRAKRSMDEVGRQMDNP---TVSQMVYPIMQMVDIATL-- 163

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
                  +GG DQ    +   +    +  P    + +P++    G KM  +    I
Sbjct: 164 --GVDAAVGGIDQRKIHMLAREHLPSIGYPAPVCIHTPIINGLDGKKMSSSAGNVI 217


>gi|312601031|gb|ADQ90286.1| Tyrosyl-tRNA synthetase [Mycoplasma hyopneumoniae 168]
          Length = 166

 Score = 90.3 bits (223), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 34/173 (19%), Positives = 58/173 (33%), Gaps = 21/173 (12%)

Query: 257 FWQYWRNIDDADVVSFAKRLTTLPMSEIDR--MAKLQGKEINEAKKIIATEITTMVHGRE 314
            +Q+  N  D         L+ L +  I+         K+    +  +A ++   +HG +
Sbjct: 1   MYQFLLNQSDEQAEKIMLWLSFLDLKVINELIFKHKNDKKQRILQYNLAQQVVFDIHGDK 60

Query: 315 EAEKAATAAMECF-----------DMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
             E A       F           D     + +P   +S    ++ + +       G   
Sbjct: 61  GLEIAKKITKILFEKLDYTEITFNDKLELKKIIPYFKVSFFNANQIIDI-------GIFK 113

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHL 416
           S  E    +   A++IN S ISN    I  +  D +    L  GKK   I  L
Sbjct: 114 SKRELNEFISHKALEINGSKISNIG-DITEELKDKSNLFLLRKGKKYFFIIEL 165


>gi|291333575|gb|ADD93269.1| tyrosyl tRNA synthetase [uncultured archaeon MedDCM-OCT-S08-C92]
          Length = 347

 Score = 89.5 bits (221), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 61/248 (24%), Positives = 98/248 (39%), Gaps = 32/248 (12%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILC-SQGVVTAYIGYDLTASSLHAGHLTQLML 59
           M   KS     L  RG + +     ELD L  ++    AY+G++ +   LHAG L  ++ 
Sbjct: 8   MSDRKS-----LVMRG-VSECVTEDELDNLLTNKETPRAYVGFEPSGL-LHAGSLVPMLK 60

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG 119
              L   G +   L+      I D               +   +E  + +FS F      
Sbjct: 61  CKELVDAGFEVTILLADWHGYINDKLGG-------SWDNLNAGVEYQRQMFSVFCPGVKF 113

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
           KT + ++          Y +++  I    S+ RM    S+  R +++      +F Y  +
Sbjct: 114 KTASEIV------IEDGYWEMVLRISKASSLKRMRRALSIMGRDEKDGDKDMSKFFYPAM 167

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG----- 234
           QA D   L    +  L +GG DQ    +   D  ++LK  K  AL +PLL + SG     
Sbjct: 168 QAADIYAL----EADLALGGMDQRHAHMLARDAADKLKLRKPVALHTPLLGSLSGPGRMD 223

Query: 235 --TKMGKT 240
              KM K+
Sbjct: 224 TDVKMSKS 231


>gi|21228065|ref|NP_633987.1| tyrosyl-tRNA synthetase [Methanosarcina mazei Go1]
 gi|74550296|sp|Q8PVK0|SYY_METMA RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|20906500|gb|AAM31659.1| Tyrosyl-tRNA synthetase [Methanosarcina mazei Go1]
          Length = 317

 Score = 89.1 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 50/270 (18%), Positives = 105/270 (38%), Gaps = 26/270 (9%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVV-TAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
            L +R  + +I    EL+ L ++     AY+GY+ +   +H GH+  +  L  LQK G K
Sbjct: 5   ELIKRN-VQEIVTEEELEGLLNKKETPRAYVGYEPSGK-IHMGHVLTVNKLIDLQKAGFK 62

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
              L+    + +          R    +E+++  +  +     FI  G  +     +   
Sbjct: 63  ITVLLADVHAYLN---------RKGTLEEVRKIADYNRRC---FIALGLDEEQTDFVYGS 110

Query: 130 TW-LCSIKYIDLLREIGSFFSVNRML-SFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
            + L +   +++L+ +    ++NR   S + V   +      +  +  Y ++QA D   L
Sbjct: 111 DFQLGAEYMLNVLK-LSRAVTLNRAKRSMDEVGRAMDDP---TVSQMVYPLMQAIDIALL 166

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
               +  + +GG DQ    +   +  + L       + +P+L    GTKM  +    I +
Sbjct: 167 ----EVDVAVGGIDQRKIHMLARENLKSLGFETPICIHTPILLGLDGTKMASSKDNFISV 222

Query: 248 NKEMTSPYNFWQY-WRNIDDADVVSFAKRL 276
           +      Y  ++  +  + D +        
Sbjct: 223 DDTEEEIYRKFKKAFCKMGDVEENPILALF 252


>gi|91773428|ref|YP_566120.1| tyrosyl-tRNA synthetase [Methanococcoides burtonii DSM 6242]
 gi|121689184|sp|Q12W06|SYY_METBU RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|91712443|gb|ABE52370.1| Tyrosyl-tRNA synthetase [Methanococcoides burtonii DSM 6242]
          Length = 317

 Score = 89.1 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 43/241 (17%), Positives = 86/241 (35%), Gaps = 21/241 (8%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            L +R     ++      +L ++   +AY GY+ +   +H GH+  +  L  LQK G + 
Sbjct: 5   DLIKRNVQEIVTEEELTKLLETKKHPSAYTGYEPSGK-IHMGHVLTVNKLLDLQKAGFEI 63

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
             L+    + +      DE R+                    F+  G        +    
Sbjct: 64  TVLLADVHAYLNQKGTMDEVRK------------TADYNKKCFLALGLDPEMTNFVYGSD 111

Query: 131 W-LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
           + L     +++L+   +        S + V  +++  +     +  Y I+QA D   L  
Sbjct: 112 FQLSPEYMLNVLKLTQATSLNRAKRSMDEVGRKMEDPK---VSQMVYPIMQAVDIALL-- 166

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
                + +GG DQ    +   +    L       + +P+L    GTKM  +    I ++ 
Sbjct: 167 --GVDVAVGGIDQRKIHMLAREGLPGLGFKAPLCIHTPILLGLDGTKMSSSNENYISVDD 224

Query: 250 E 250
           +
Sbjct: 225 D 225


>gi|223673858|pdb|2ZP1|A Chain A, Structual Basis Of Iodo-Tyrosine Recognition By Engineered
           Archeal Tyrosyl-Trna Synthetase
          Length = 314

 Score = 89.1 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 55/316 (17%), Positives = 103/316 (32%), Gaps = 54/316 (17%)

Query: 20  QISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTS 79
           +I +  EL  +  +   +AYIG++ +   +H GH  Q+  +  LQ  G   I L+    +
Sbjct: 13  EIISEEELREVLKKDEKSAYIGFEPSGK-IHLGHYLQIKKMIDLQNAGFDIIILLADLAA 71

Query: 80  IIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYID 139
            +      DE R+      I +  +K+        KY  G            L     ++
Sbjct: 72  YLNQKGELDEIRK------IGDYNKKVFEAMGLKAKYVYGSEFQ--------LDKDYTLN 117

Query: 140 LLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGG 199
           + R            S E +    + E      E  Y I+Q      L       + +GG
Sbjct: 118 VYRLALKTTLKRARRSMELIAR--EDENP-KVAEVIYPIMQVNTSHYL----GVDVAVGG 170

Query: 200 SDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFW 258
            +Q    +   +L       K+  + +P+LT   G  KM  +    I ++    SP    
Sbjct: 171 MEQRKIHMLARELLP----KKVVCIHNPVLTGLDGEGKMSSSKGNFIAVD---DSPEEIR 223

Query: 259 QYWRNI----------DDADVVSFAKR--------------LTTLPMSEIDRMAKLQGKE 294
              +               ++  +                 LT     E++ + K +   
Sbjct: 224 AKIKKAYCPAGVVEGNPIMEIAKYFLEYPLTIKRPEKFGGDLTVNSYEELESLFKNKELH 283

Query: 295 INEAKKIIATEITTMV 310
               K  +A E+  ++
Sbjct: 284 PMYLKNAVAEELIKIL 299


>gi|303244369|ref|ZP_07330705.1| tyrosyl-tRNA synthetase [Methanothermococcus okinawensis IH1]
 gi|302485264|gb|EFL48192.1| tyrosyl-tRNA synthetase [Methanothermococcus okinawensis IH1]
          Length = 316

 Score = 89.1 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 45/230 (19%), Positives = 83/230 (36%), Gaps = 23/230 (10%)

Query: 25  RELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDP 84
            EL  + ++    AYIG++ +   +H GH  Q+  +  LQ  G   I L+    + +   
Sbjct: 23  DELKNVMNKDKKIAYIGFEPSGK-IHLGHYLQIKKMIDLQNAGFDIIILLADLHAYLNQK 81

Query: 85  SFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREI 144
                       +EI E  E  K +F++      G     +  +E  L     +D+ R  
Sbjct: 82  G---------TLEEIHELAEYNKNVFNAM-----GLKAKYIYGSEFQLEKDYTLDVYRIA 127

Query: 145 GSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWG 204
                     S E +    + E      E  Y ++Q  D   L       + +GG +Q  
Sbjct: 128 LKTTLKRARRSMEVIAR--EDENP-KVAEVVYPLMQVNDIKHLN----VDVAVGGMEQRK 180

Query: 205 NIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTS 253
             +   ++   +       + +P+LT   G  KM  +    I ++ E  +
Sbjct: 181 IHMLAREILPNMGYKSPVCIHNPVLTGLDGEGKMSSSKGNFIAVDDEPNT 230


>gi|407269|gb|AAA03403.1| unknown [Mycoplasma genitalium]
          Length = 81

 Score = 88.7 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 40/80 (50%), Positives = 59/80 (73%), Gaps = 2/80 (2%)

Query: 122 DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA 181
           D ++  N+ WL  + YI+++RE+G+FFSVN+MLS ++  +R   E+ L+ +E NYMILQA
Sbjct: 3   DVIIHENKVWLEKLNYIEVIRELGAFFSVNKMLSTDAFSAR--WEKGLTLMELNYMILQA 60

Query: 182 YDFVELAKNYDCRLQMGGSD 201
           YDF  L KN++  LQ+GGSD
Sbjct: 61  YDFYYLHKNHNVTLQIGGSD 80


>gi|47097764|ref|ZP_00235252.1| S4 domain protein [Listeria monocytogenes str. 1/2a F6854]
 gi|47013862|gb|EAL04907.1| S4 domain protein [Listeria monocytogenes str. 1/2a F6854]
          Length = 104

 Score = 88.7 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 18/104 (17%), Positives = 34/104 (32%), Gaps = 14/104 (13%)

Query: 321 TAAMECFDMSIHS----------QHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARR 370
             +   F   + +          + +PT      E      L+  +V  G   S  +AR 
Sbjct: 2   KISKALFSGDVKALTADEIEQGFKDVPTFVAEDSE----ANLVDWLVTLGIEPSKRQARE 57

Query: 371 HLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            + + AI IN     + +  +   D        +  GKK + + 
Sbjct: 58  DVGNGAIYINGERQQDLEKIMDASDRIENKFTIVRRGKKKYFLV 101


>gi|73669252|ref|YP_305267.1| tyrosyl-tRNA synthetase [Methanosarcina barkeri str. Fusaro]
 gi|108860970|sp|Q46BQ5|SYY_METBF RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|72396414|gb|AAZ70687.1| tyrosyl-tRNA synthetase [Methanosarcina barkeri str. Fusaro]
          Length = 317

 Score = 88.7 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 52/270 (19%), Positives = 103/270 (38%), Gaps = 26/270 (9%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVV-TAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
            L +R  + +I    EL+ L ++     AY+GY+ +   +H GH+  +  L  LQK G +
Sbjct: 5   DLIKRN-VQEIVTEGELEELLNKKKAPRAYVGYEPSGK-IHMGHVLTVNKLIDLQKAGFE 62

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
              L+    + +          R    +E+++  +  K     FI  G  K     +   
Sbjct: 63  ITVLLADVHAYLN---------RKGTLEEVRKIADYNKRC---FIALGLDKEKTNFVYGS 110

Query: 130 TW-LCSIKYIDLLREIGSFFSVNRML-SFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
            + L +   +++L+ +    ++NR   S + V   +      +  +  Y ++QA D   L
Sbjct: 111 DYQLGAEYMLNVLK-LSRSVTLNRARRSMDEVGRAMDDP---TVSQMVYPLMQAIDIAML 166

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
                  + +GG DQ    +   +  + L       + +P+L    GTKM  +    I +
Sbjct: 167 ----GVDIAVGGIDQRKIHMLARENLKNLGFETPICIHTPILLGLDGTKMASSKENFISV 222

Query: 248 NKEMTSPYNFWQY-WRNIDDADVVSFAKRL 276
           +      Y   +  +  I D +        
Sbjct: 223 DDTEEEIYRKLKKAYCKIGDTEENPILALF 252


>gi|312136697|ref|YP_004004034.1| tyrosyl-tRNA synthetase [Methanothermus fervidus DSM 2088]
 gi|311224416|gb|ADP77272.1| tyrosyl-tRNA synthetase [Methanothermus fervidus DSM 2088]
          Length = 321

 Score = 88.3 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 55/251 (21%), Positives = 96/251 (38%), Gaps = 22/251 (8%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            L+++G +  I+   EL  +  +    AYIGY+ +   +H GHL  +  +  LQK G K 
Sbjct: 6   ELAKKGTVEIIT-IEELKEVLKKKNPVAYIGYEPSGK-IHLGHLITIKKMIDLQKIGFKI 63

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
             L+    + +      DE R      EI E  ++       F+  G  K    +L +E 
Sbjct: 64  KILLADYHAYLNYKGELDEIR------EIAEYNKRC------FLAMGLSKDTEFILGSEF 111

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
                  +DL R +    ++NR     S   R   E  +S  E  Y ++Q  D V L   
Sbjct: 112 QTDDDYVLDLYR-LAHITTLNRAKRSMSQIIREAGEHKVS--EVLYPLMQVIDMVHL--- 165

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNK 249
               + +GG +Q    +   D   ++       + +P++    G  KM  +    I ++ 
Sbjct: 166 -GVDVSVGGMEQRKIHMLARDNLPKIGYTPPVCIHTPIIHGTDGSEKMSSSKGNFIAVDD 224

Query: 250 EMTSPYNFWQY 260
                 +    
Sbjct: 225 PPKVIKDKIMK 235


>gi|213419416|ref|ZP_03352482.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E01-6750]
          Length = 125

 Score = 88.3 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 23/95 (24%), Positives = 42/95 (44%), Gaps = 6/95 (6%)

Query: 295 INEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS------QHMPTISISKDEVSR 348
              A+ ++A ++T +VHG E    A       F  S+ +      + +    +   E+ +
Sbjct: 2   APRAQYVLAEQVTRLVHGEEGLVAAKRITECLFSGSLSALSEADFEQLAQDGVPMVEMEK 61

Query: 349 GMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSI 383
           G  L+  +V A    S  +AR+ + SNA+ IN   
Sbjct: 62  GADLMQALVDAELQPSRGQARKTIASNAVTINGEK 96


>gi|323695172|ref|ZP_08109303.1| hypothetical protein HMPREF9475_04168 [Clostridium symbiosum
           WAL-14673]
 gi|323500772|gb|EGB16703.1| hypothetical protein HMPREF9475_04168 [Clostridium symbiosum
           WAL-14673]
          Length = 86

 Score = 88.3 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 21/82 (25%), Positives = 42/82 (51%), Gaps = 2/82 (2%)

Query: 336 MPTISISKDEVS-RGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
           MPT  +++++ +   + +LT++ K+G A S +EARR+++   + ++   + + K      
Sbjct: 1   MPTAELTEEDFNGDEIDILTILQKSGLAPSRSEARRNVEQGGVAVDGEAVKDSKAVFTKA 60

Query: 395 DFDSTGNIKLSFGKKNHIICHL 416
                G I +  GKKN     L
Sbjct: 61  QLSGDG-IVVKRGKKNFKKVIL 81


>gi|289192406|ref|YP_003458347.1| tyrosyl-tRNA synthetase [Methanocaldococcus sp. FS406-22]
 gi|288938856|gb|ADC69611.1| tyrosyl-tRNA synthetase [Methanocaldococcus sp. FS406-22]
          Length = 301

 Score = 88.3 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 56/316 (17%), Positives = 107/316 (33%), Gaps = 54/316 (17%)

Query: 20  QISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTS 79
           +I +  EL  + ++   +AYIG++ +   +H GH  Q+  +  LQ  G   I L+    +
Sbjct: 8   EIISEEELKEVLTKDEKSAYIGFEPSGK-IHLGHYLQIKKMIDLQNAGFDIIILLADLHA 66

Query: 80  IIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYID 139
            +      DE R+      I E  +++        KY  G            L     ++
Sbjct: 67  YLNQKGELDEIRK------IGEYNKRVFEAMGLKAKYVYGSEFQ--------LDKDYTLN 112

Query: 140 LLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGG 199
           + +            S E +    + E      E  Y I+Q  D   L       + +GG
Sbjct: 113 VYKLALKTTLKRARRSMELIAR--EDENP-KVAEVIYPIMQVNDIHYL----GVDVAVGG 165

Query: 200 SDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFW 258
            +Q    +   +L       K+  + +P+LT   G  KM  +    I ++    SP    
Sbjct: 166 MEQRKIHMLARELLP----KKVVCIHNPVLTGLDGEGKMSSSKGNFIAVD---DSPEEIK 218

Query: 259 QYWRNI----------DDADVVSFAKR--LT---------TL---PMSEIDRMAKLQGKE 294
              +               ++  +     LT          L      E++ + K +   
Sbjct: 219 AKIKKAYCPAGVVEGNPIMEIAKYFLEYPLTINRPEKYGGDLVVNSYEELETLFKNKELH 278

Query: 295 INEAKKIIATEITTMV 310
             + K  +A E+  ++
Sbjct: 279 PMDLKNAVAEELIKIL 294


>gi|109099438|ref|XP_001107606.1| PREDICTED: tyrosyl-tRNA synthetase, mitochondrial, partial [Macaca
           mulatta]
          Length = 169

 Score = 88.3 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 37/103 (35%), Positives = 53/103 (51%), Gaps = 8/103 (7%)

Query: 13  SERGFIHQISNPR----ELDILCSQG----VVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
             RG             EL  L  +G      T Y G+D TA SLH GHL  L+ LF LQ
Sbjct: 43  KARGLFKNFFPETGTKIELPELFDRGTASFPQTIYCGFDPTADSLHVGHLLALLGLFHLQ 102

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIK 107
           + GH  I+L+GG T+ +GDPS R + R  + ++ ++ N   ++
Sbjct: 103 RAGHNVIALVGGATARLGDPSGRTKEREALETERVRANARALR 145


>gi|298675238|ref|YP_003726988.1| tyrosyl-tRNA synthetase [Methanohalobium evestigatum Z-7303]
 gi|298288226|gb|ADI74192.1| tyrosyl-tRNA synthetase [Methanohalobium evestigatum Z-7303]
          Length = 319

 Score = 88.3 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 45/280 (16%), Positives = 98/280 (35%), Gaps = 25/280 (8%)

Query: 10  SILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
             L +R     ++     +++ ++   TAY+GY+ +   +H GH+  +  L  LQ++G  
Sbjct: 4   EELIKRNLQEIVTEEELDELVATKNRPTAYVGYEPSGK-IHMGHVLTVNKLIDLQRSGFD 62

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
            I L+    + +               +E++E  E+ K     F+  G        +   
Sbjct: 63  IIVLLADIHAYLNQKG---------SLEEVRELAEQNKRC---FLALGLDPDKTKFVFGS 110

Query: 130 TW-LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
            + L     +++L+            S + V  ++   +     +  Y I+QA D   L 
Sbjct: 111 DFQLNHDYMLNVLKLTQETSLNRAKRSMDEVGRKMDDPK---VSQMVYPIMQAVDIAML- 166

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
              +  + + G DQ    +   +    +       + +P++    G KM  +    I ++
Sbjct: 167 ---EVDVAVSGIDQRKIHMLAREELPDVGYRSPTCIHTPIMLGLDGVKMSSSKENYISVD 223

Query: 249 KE----MTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI 284
                        +     ++D  V+   K        EI
Sbjct: 224 DTEDDIKRKMKKAYCPAETVEDNPVLEIFKYHVFPRYDEI 263


>gi|257053593|ref|YP_003131426.1| tyrosyl-tRNA synthetase [Halorhabdus utahensis DSM 12940]
 gi|256692356|gb|ACV12693.1| tyrosyl-tRNA synthetase [Halorhabdus utahensis DSM 12940]
          Length = 345

 Score = 88.3 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 48/286 (16%), Positives = 95/286 (33%), Gaps = 28/286 (9%)

Query: 19  HQISNPRELDILCS-QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGG 77
            ++    EL  L   +   + YIGY  T   +H GH T +  L      G     L+   
Sbjct: 15  AEVVTEDELRELFEDREEPSVYIGYAPTGE-MHIGHFTTIRKLADFLHAGMDVTVLIADL 73

Query: 78  TSIIGD---PSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW-LC 133
            + + D   P    E+R     + I+  +E            G        +    + L 
Sbjct: 74  HAHLDDAKSPFDLLEARTAYYQETIEAMVEAA----------GADPEQITFVRGRDFELD 123

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDC 193
           S   ++LLR            +   V    + +   +     Y ++Q  D   L  +   
Sbjct: 124 SEYTLELLRMTAETTIARAQRAASEVVR--ESDSP-NLGGLVYPLMQTLDVDALDAD--- 177

Query: 194 RLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA-IWLNKEMT 252
            +  GG DQ G  +   ++           + +PLL+  +G KM  +   + + L  +  
Sbjct: 178 -VAYGGIDQRGIYMLSREILPEHGGEAPTCVFAPLLSGLTGGKMSASEESSKVALTDDPD 236

Query: 253 ----SPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE 294
                  + +     ++   V+ + + L    + E +    ++  E
Sbjct: 237 TVVEKIGDAYCPMGEVEGNGVLEYVRYLVFPILDEREEAFVVERPE 282


>gi|294496409|ref|YP_003542902.1| tyrosyl-tRNA synthetase [Methanohalophilus mahii DSM 5219]
 gi|292667408|gb|ADE37257.1| tyrosyl-tRNA synthetase [Methanohalophilus mahii DSM 5219]
          Length = 317

 Score = 87.9 bits (217), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 47/280 (16%), Positives = 95/280 (33%), Gaps = 27/280 (9%)

Query: 11  ILSERGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
            L +R     ++  +ELD L       +AY GY+ +   +H GH+  +  L  LQK G  
Sbjct: 5   DLVKRNAQEIVT-EKELDELMEAKAEPSAYTGYEPSGK-IHMGHVLTVNKLIDLQKAGFN 62

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
              L+    + +               +E+++  +  +     F+  G        +   
Sbjct: 63  ITVLLADVHAFLNQKG---------TMEEVKQIADYNRRC---FLALGLDPDKTNFVYGS 110

Query: 130 TW-LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
            + +     +++L+   +        S + V   +   +     +  Y I+QA D   L 
Sbjct: 111 DFQMGEEYMLNVLKLTCTTSLNRARRSMDEVGRTMDDPR---VSQMVYPIMQAIDIAML- 166

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
              D  + +GG DQ    +   +    +       L +P+L    G KM  +    I ++
Sbjct: 167 ---DVDVAVGGIDQRKIHMLAREGLPGMGYRAPICLHTPILLGLDGEKMASSRGNYISVD 223

Query: 249 KEMTSPYNFWQYWR----NIDDADVVSFAKRLTTLPMSEI 284
            +        +        I D  V+   +        E+
Sbjct: 224 DDEAVIKKKMKKAFCPAGEIVDNPVLQLFRYHIFPRYEEV 263


>gi|1707598|emb|CAA69709.1| tyrosyl-tRNA synthetase [Mycobacterium smegmatis str. MC2 155]
          Length = 72

 Score = 87.9 bits (217), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 30/63 (47%)

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           + L+V  G + S   ARR +    + +NN+ + +++   +  DF   G + L  GK++  
Sbjct: 1   VDLLVATGLSNSKGAARRTVAEGGVYVNNARVESDEWVPQESDFLHEGWLVLRRGKRHIA 60

Query: 413 ICH 415
              
Sbjct: 61  GVR 63


>gi|20093954|ref|NP_613801.1| tyrosyl-tRNA synthetase [Methanopyrus kandleri AV19]
 gi|74560761|sp|Q8TXZ2|SYY_METKA RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|19886910|gb|AAM01731.1| Tyrosyl-tRNA synthetase [Methanopyrus kandleri AV19]
          Length = 324

 Score = 87.6 bits (216), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 49/285 (17%), Positives = 104/285 (36%), Gaps = 26/285 (9%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R  +  ++      +L  +    AY+G++ +   +H GH   +  +  LQ+ G   I
Sbjct: 9   LVTRNAVEVVTEEELRQLLEEKEEPVAYVGFEPSGK-VHLGHKLVIDKMIDLQEAGFHVI 67

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+    + + +             +E++E  +  +  F +            +L +E  
Sbjct: 68  ILLADLHAYLNEKG---------TLEEVRELADYNRRCFLAMG--LDPNKTEFVLGSEFQ 116

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           L     +D+ R +    ++ R      + +R +    +S  +  Y ++QA D V L    
Sbjct: 117 LDEDYALDVYR-MARHTTMRRARRSMDMIARSEENPPVS--QVVYPLMQALDIVHLN--- 170

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKE 250
              L +GG +Q    +   D+  +L       L +P++    G  KM  + +  I ++ E
Sbjct: 171 -VDLAVGGLEQRKIHMLARDVLPKLGYDSPTCLHTPIIHGLDGDEKMSSSKNNFIAVDDE 229

Query: 251 MTSPYNFWQY----WRNIDDADVVSFAKRLTTLPMSE--IDRMAK 289
                   +      R  +   ++   +        E  I+R  K
Sbjct: 230 PEVIREKLRKAYCPAREAEGNPILEIYRYFIFREYDEVTIERPEK 274


>gi|154151994|ref|YP_001405612.1| tyrosyl-tRNA synthetase [Candidatus Methanoregula boonei 6A8]
 gi|154000546|gb|ABS56969.1| tyrosyl-tRNA synthetase [Methanoregula boonei 6A8]
          Length = 313

 Score = 87.2 bits (215), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 45/247 (18%), Positives = 85/247 (34%), Gaps = 24/247 (9%)

Query: 15  RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLM 74
           R  +  ++   EL  L ++     Y GY+ +   +H GHL  +  L  LQ  G +   L+
Sbjct: 9   RNTVEIVT-EDELRALLARPTKKVYAGYEPSGE-IHLGHLVTVNKLVDLQAAGFEVTVLL 66

Query: 75  GGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCS 134
               + +          R    +++ E  E  +  F      G G  +   +       +
Sbjct: 67  ADLHAFLN---------RKGTLEKVGELAEYNRRCFE-----GLGLKNVRYILGSDLQLN 112

Query: 135 IKYIDLLREIGSFFSVNRML-SFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDC 193
            +Y  L+ ++    ++ R   S + V  ++      +  +  Y I+Q  D   L      
Sbjct: 113 REYELLVHQLSQQITLARATRSMDEVGRQMDHP---TVSQMVYPIMQMADIAML----GV 165

Query: 194 RLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTS 253
              +GG DQ    +   +     K P    + +P+L    G KM  +    I +      
Sbjct: 166 DAAVGGIDQRKIHMLAREHLPNFKYPSPVCIHTPILNGLDGKKMSSSQGNYISVADSEDE 225

Query: 254 PYNFWQY 260
                Q 
Sbjct: 226 IKKKCQK 232


>gi|300819301|ref|ZP_07099500.1| S4 domain protein [Escherichia coli MS 107-1]
 gi|300528072|gb|EFK49134.1| S4 domain protein [Escherichia coli MS 107-1]
          Length = 77

 Score = 86.4 bits (213), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 20/68 (29%), Positives = 32/68 (47%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            +G  L+  +V +    S  +AR+ + SNAI IN    S+ +   K +D        L  
Sbjct: 7   KKGADLMQALVDSELQPSRGQARKTIASNAITINGEKQSDPEYFFKEEDRLFGRFTLLRR 66

Query: 407 GKKNHIIC 414
           GKKN+ + 
Sbjct: 67  GKKNYCLI 74


>gi|124486546|ref|YP_001031162.1| tyrosyl-tRNA synthetase [Methanocorpusculum labreanum Z]
 gi|158512821|sp|A2SU89|SYY_METLZ RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|124364087|gb|ABN07895.1| tyrosyl-tRNA synthetase [Methanocorpusculum labreanum Z]
          Length = 317

 Score = 86.0 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 54/354 (15%), Positives = 107/354 (30%), Gaps = 55/354 (15%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            L  R     ++   EL  L ++     Y GY+ +   +H GHL  +  L  ++  G   
Sbjct: 5   ELVTRNTAEIVT-EDELRALLNKPTKRVYTGYEPSGE-IHLGHLVTINKLMDMKAAGFDV 62

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           + L+    + +          R    ++I+E  +  K    +      G   A  +    
Sbjct: 63  VVLIANLHAYLN---------RKGTFEQIKELADYNKACIEAV-----GLKGAEFVLGTD 108

Query: 131 WLCSIKYIDLLREIGSFFSVNRML-SFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
              + KY   +  +    ++NR   S + V   +         +  Y ++Q  D   L  
Sbjct: 109 VQLTPKYQTEVLTLCQQITLNRATRSMDEVGRAMDNP---MVSQMVYPVMQVVDIPTLNV 165

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
           +       GG DQ    +   +    L       + +P++    G KM  +    + +  
Sbjct: 166 DAAV----GGIDQRKIHMLAREHLPTLGYKPPVCIHTPIVNGLDGEKMSSSKGNVVSVAD 221

Query: 250 EMTSPYNFWQYWRNIDDAD---VVSFAKRLTTLPMSEID-RMAKLQGKEINEAKKIIATE 305
                    +      + +   ++   +      M  I  R  +  G ++          
Sbjct: 222 SPEEIKKKMKKAFCPPETEGNPILQIFRYNVFPRMDTIAIRRPEKFGGDLE--------- 272

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKA 359
                H   E E A           IH   +        + + G  L  L+  A
Sbjct: 273 ----FHSYAELEAAYA------GGKIHPMDL--------KAACGDALTELLADA 308


>gi|116334972|ref|YP_802467.1| tyrosyl-tRNA synthetase [Candidatus Carsonella ruddii PV]
 gi|116235253|dbj|BAF35101.1| tyrosyl-tRNA synthetase [Candidatus Carsonella ruddii PV]
          Length = 325

 Score = 85.6 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 42/211 (19%), Positives = 76/211 (36%), Gaps = 26/211 (12%)

Query: 32  SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESR 91
           +        G D T  S+H GHL  +  LF+L       I ++G  T+            
Sbjct: 15  NNNSKIIKFGIDPTFFSIHLGHLFIINYLFFLIYKKFIIIIIIGDYTTKFK--------- 65

Query: 92  RMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVN 151
           + +  + +  N   +K    + +       +  ++ N  W         +        +N
Sbjct: 66  KKINLKNLIINSICLKSQIKNIL------GEIDVVFNSIWYNKFNLCYFINL------IN 113

Query: 152 RMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGID 211
            +     +   LK   S     + Y  +Q+YD V L        ++GG DQ  NIICG  
Sbjct: 114 LVSIKNYINKTLKNNLSKKISNYIYPTIQSYDSVFLKS----GFEIGGLDQLLNIICGRI 169

Query: 212 LGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
              +    K   +T  +L+  +  K+ K+ +
Sbjct: 170 FQSKFNIKKQNIITLKILSINN-IKISKSKN 199


>gi|213021806|ref|ZP_03336253.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
          serovar Typhi str. 404ty]
          Length = 61

 Score = 85.6 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 18/47 (38%), Positives = 27/47 (57%)

Query: 6  SDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAG 52
          S+ +  L ERG + Q+++   L    +QG +  Y G+D TA SLH G
Sbjct: 8  SNLIKQLQERGLVAQVTDEDALAERLAQGPIALYCGFDPTADSLHLG 54


>gi|288931160|ref|YP_003435220.1| tyrosyl-tRNA synthetase [Ferroglobus placidus DSM 10642]
 gi|288893408|gb|ADC64945.1| tyrosyl-tRNA synthetase [Ferroglobus placidus DSM 10642]
          Length = 324

 Score = 85.6 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 50/237 (21%), Positives = 95/237 (40%), Gaps = 23/237 (9%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            L +R     ++     ++L ++    AY+GY+ +   +H GH+  +  L  LQ  G   
Sbjct: 8   ELVKRNAEEIVTEEELKELLETKDKPRAYVGYEPSGE-IHLGHMMTVNKLLDLQDAGFDV 66

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           + L+    + + +    +E R+      I E  +      ++F+  G  ++    +    
Sbjct: 67  VVLLADVHAYLNEKGDFEEIRK------IAEYNK------AAFVALGLDESKTEFVLGSE 114

Query: 131 W-LCSIKYIDLLREIGSFFSVNRML-SFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
           + L     +D+L+ +    +VNR   S + V  R  +E  +   +  Y ++QA D   L 
Sbjct: 115 FQLSRDYVLDVLK-MARITTVNRARRSMDEVSRR--KEDPM-VSQMIYPLMQALDIAHLR 170

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
                 L +GG DQ    +   +   RL       L +P+L    G KM  +    I
Sbjct: 171 ----IDLAVGGIDQRKIHMLARENLPRLGYRSPICLHTPILVGLDGEKMSSSKGNYI 223


>gi|288559845|ref|YP_003423331.1| tyrosyl-tRNA synthetase TyrS [Methanobrevibacter ruminantium M1]
 gi|288542555|gb|ADC46439.1| tyrosyl-tRNA synthetase TyrS [Methanobrevibacter ruminantium M1]
          Length = 321

 Score = 85.6 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 43/241 (17%), Positives = 79/241 (32%), Gaps = 22/241 (9%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            L + G +  I    EL     +    AY GY+ +   +H GH   +M L  LQK G K 
Sbjct: 8   ELIQEGTLE-IIELEELKQKLEKETPIAYTGYEPSGK-IHLGHAVTIMKLKQLQKLGFKI 65

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
             L+    + +   + +           ++E  E  +     F   G       +L +  
Sbjct: 66  KILLADYHAFL---NGKG---------TVEEIAETAEYNKRCFQGLGLADDTEYILGSSF 113

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
              S    D+ +            S + V       +        Y ++Q  D   L   
Sbjct: 114 QTGSEYTNDVYQLATITTLKRAKRSMDQVSRHDDNPK---VASVVYPLMQTADMSALN-- 168

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNK 249
               + +GG +Q    +   +   R+       + +PL+    G  KM  +    I ++ 
Sbjct: 169 --VDIALGGMEQRKIQMLARENLPRIGKEAPVCIHTPLIHGLDGDDKMSSSKGNYIAVDD 226

Query: 250 E 250
           +
Sbjct: 227 D 227


>gi|323463147|pdb|3QE4|A Chain A, An Evolved Aminoacyl-Trna Synthetase With Atypical
           Polysubstrate Specificity
 gi|323463148|pdb|3QE4|B Chain B, An Evolved Aminoacyl-Trna Synthetase With Atypical
           Polysubstrate Specificity
          Length = 312

 Score = 85.3 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 53/317 (16%), Positives = 105/317 (33%), Gaps = 56/317 (17%)

Query: 20  QISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTS 79
           +I +  EL  +  +   +A IG++ +   +H GH  Q+  +  LQ  G   I ++    +
Sbjct: 13  EIISEEELREVLKKDEKSALIGFEPSGK-IHLGHYLQIKKMIDLQNAGFDIIIVLADLHA 71

Query: 80  IIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKY-I 138
            +      DE R+      I +  +K+        KY         +    W+    Y +
Sbjct: 72  YLNQKGELDEIRK------IGDYNKKVFEAMGLKAKY---------VYGSEWMLDKDYTL 116

Query: 139 DLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMG 198
           ++ R            S E +    + E      E  Y I+Q      L       + +G
Sbjct: 117 NVYRLALKTTLKRARRSMELIAR--EDENP-KVAEVIYPIMQVNGAHYL----GVDVAVG 169

Query: 199 GSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNF 257
           G +Q    +   +L       K+  + +P+LT   G  KM  +    I ++    SP   
Sbjct: 170 GMEQRKIHMLARELLP----KKVVCIHNPVLTGLDGEGKMSSSKGNFIAVD---DSPEEI 222

Query: 258 WQYWRNI----------DDADVVSFAKR--------------LTTLPMSEIDRMAKLQGK 293
               +               ++  +                 LT     E++ + K +  
Sbjct: 223 RAKIKKAYCPAGVVEGNPIMEIAKYFLEYPLTIKRPEKFGGDLTVNSYEELESLFKNKEL 282

Query: 294 EINEAKKIIATEITTMV 310
              + K  +A E+  ++
Sbjct: 283 HPMDLKNAVAEELIKIL 299


>gi|295096026|emb|CBK85116.1| Tyrosyl-tRNA synthetase [Enterobacter cloacae subsp. cloacae NCTC
           9394]
          Length = 65

 Score = 85.3 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 16/61 (26%), Positives = 26/61 (42%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
             +V +    S  +AR+ + SNAI IN    ++ +      D        L  GKKN+ +
Sbjct: 2   QALVDSELQPSRGQARKTIASNAITINGEKQADPEYTFTENDRLYGRYTLLRRGKKNYCL 61

Query: 414 C 414
            
Sbjct: 62  V 62


>gi|213021807|ref|ZP_03336254.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. 404ty]
          Length = 68

 Score = 84.9 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 24/67 (35%), Positives = 42/67 (62%)

Query: 57  LMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY 116
           ++ L   Q+ GHKP++L+GG T +IGDPSF+   R++   + +QE + KI+   + F+ +
Sbjct: 1   MLCLKRFQQAGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVAKIRKQVAPFLDF 60

Query: 117 GTGKTDA 123
             G+  A
Sbjct: 61  DCGENSA 67


>gi|148642573|ref|YP_001273086.1| tyrosyl-tRNA synthetase [Methanobrevibacter smithii ATCC 35061]
 gi|222445932|ref|ZP_03608447.1| hypothetical protein METSMIALI_01580 [Methanobrevibacter smithii
           DSM 2375]
 gi|189083659|sp|A5UKJ0|SYY_METS3 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|148551590|gb|ABQ86718.1| tyrosyl-tRNA synthetase, TyrS [Methanobrevibacter smithii ATCC
           35061]
 gi|222435497|gb|EEE42662.1| hypothetical protein METSMIALI_01580 [Methanobrevibacter smithii
           DSM 2375]
          Length = 319

 Score = 84.9 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 47/240 (19%), Positives = 85/240 (35%), Gaps = 22/240 (9%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            L E+G +  + +  EL  +  +    AY GY+ +   +H GH   +  L  LQK G K 
Sbjct: 8   QLIEKGTLE-VIDTEELKEVLKKEQPIAYTGYEPSGK-IHLGHAVTVQKLKTLQKLGFKI 65

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
             L+    + +   + +           I+E  E  +     F   G  +T   +L +  
Sbjct: 66  KILLADFHAFL---NGKGS---------IEEIAETAEYNMKCFKALGLDETTEFILGSSF 113

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
            L       + +            S + V    +  +        Y I+Q  D V L   
Sbjct: 114 QLNEDYASKVYKLATLTTLKRARRSMDQVSRHDENPK---VASVVYPIMQTVDMVAL--- 167

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNK 249
            D  + +GG +Q    +   +  E++       + +PLL    G  KM  +    I ++ 
Sbjct: 168 -DVDVALGGMEQRKIQMLARENLEKIDEKVPVCIHTPLLHGLDGDAKMSSSKGNYIAVDD 226


>gi|288869553|ref|ZP_06409463.1| tyrosine--tRNA ligase [Methanobrevibacter smithii DSM 2374]
 gi|288861893|gb|EFC94191.1| tyrosine--tRNA ligase [Methanobrevibacter smithii DSM 2374]
          Length = 322

 Score = 84.5 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 47/240 (19%), Positives = 85/240 (35%), Gaps = 22/240 (9%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            L E+G +  + +  EL  +  +    AY GY+ +   +H GH   +  L  LQK G K 
Sbjct: 11  QLIEKGTLE-VIDTEELKEVLKKEQPIAYTGYEPSGK-IHLGHAVTVQKLKTLQKLGFKI 68

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
             L+    + +   + +           I+E  E  +     F   G  +T   +L +  
Sbjct: 69  KILLADFHAFL---NGKGS---------IEEIAETAEYNMKCFKALGLDETTEFILGSSF 116

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
            L       + +            S + V    +  +        Y I+Q  D V L   
Sbjct: 117 QLNEDYASKVYKLATLTTLKRARRSMDQVSRHDENPK---VASVVYPIMQTVDMVAL--- 170

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNK 249
            D  + +GG +Q    +   +  E++       + +PLL    G  KM  +    I ++ 
Sbjct: 171 -DVDVALGGMEQRKIQMLARENLEKIDEKVPVCIHTPLLHGLDGDAKMSSSKGNYIAVDD 229


>gi|150403186|ref|YP_001330480.1| tyrosyl-tRNA synthetase [Methanococcus maripaludis C7]
 gi|150034216|gb|ABR66329.1| tyrosyl-tRNA synthetase [Methanococcus maripaludis C7]
          Length = 309

 Score = 84.5 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 45/232 (19%), Positives = 90/232 (38%), Gaps = 23/232 (9%)

Query: 20  QISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTS 79
           +I +  EL  L       AYIG++ +   +H GH  Q+  +  LQK G K I L+    +
Sbjct: 11  EIISIEELAELLKNEEKIAYIGFEPSGR-IHMGHYLQIRKMIDLQKAGFKIIILLADLHA 69

Query: 80  IIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYID 139
            +               +E++   E+ + +F +      G     +  +E  L     +D
Sbjct: 70  YLNQKG---------TMEEVRALGEENRKVFEAM-----GLVADYVYGSEFQLKDEYTLD 115

Query: 140 LLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGG 199
           + + +    ++NR      V +R + E         Y ++Q  D   L  +    + +GG
Sbjct: 116 VYK-LALSTTLNRARRSMEVIAR-EDENP-KVASVVYPLMQVNDIKHLNAD----VAVGG 168

Query: 200 SDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKE 250
            +Q    +   ++   +       + +P+LT   G  KM  +    I ++ +
Sbjct: 169 MEQRKIHMLSREILPSMGYKAPVCIHNPVLTGLDGEGKMSSSKGNFIAVDDD 220


>gi|330506513|ref|YP_004382941.1| tyrosyl-tRNA synthetase [Methanosaeta concilii GP-6]
 gi|328927321|gb|AEB67123.1| tyrosyl-tRNA synthetase [Methanosaeta concilii GP-6]
          Length = 319

 Score = 84.5 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 45/229 (19%), Positives = 88/229 (38%), Gaps = 22/229 (9%)

Query: 25  RELDILCSQ-GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGD 83
            EL  L  +     AY+GY+ T+  +H GH+     L  LQ+ G   + L+    + + +
Sbjct: 18  DELKGLLEKPSRPRAYVGYE-TSGKVHLGHMLTANKLLDLQRAGFDVVVLLADLHAFLNE 76

Query: 84  PSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLRE 143
                        +E+++  +  +     F+  G        +    +     ++  + +
Sbjct: 77  KG---------TLEEVRQIADYNRDC---FMALGLDPERTEFVYGTDYQLQPDFMLKILQ 124

Query: 144 IGSFFSVNRML-SFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQ 202
           +    S+NR   S + V      E  +   +  Y ++QA D  +L       L +GG DQ
Sbjct: 125 MARNTSLNRARRSMDEVSR--NAENPM-VSQMIYPLMQAVDIADLK----IDLAVGGIDQ 177

Query: 203 WGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
               +   +   RL  P    L +PL+   +G KM  +    I +++  
Sbjct: 178 RKIHMLAREELPRLGLPAPVCLHTPLIPGLNGEKMSSSKGNNIAVDEPA 226


>gi|134046437|ref|YP_001097922.1| tyrosyl-tRNA synthetase [Methanococcus maripaludis C5]
 gi|132664062|gb|ABO35708.1| tyrosyl-tRNA synthetase [Methanococcus maripaludis C5]
          Length = 309

 Score = 84.5 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 45/232 (19%), Positives = 91/232 (39%), Gaps = 23/232 (9%)

Query: 20  QISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTS 79
           +I +  EL  L  +    AYIG++ +   +H GH  Q+  +  LQK G K + L+    +
Sbjct: 11  EIVSSEELAELLKKEEKIAYIGFEPSGR-IHMGHYLQIRKMIDLQKAGFKILILLADLHA 69

Query: 80  IIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYID 139
            +               +E++   E+ + +F +      G     +  +E  L     ID
Sbjct: 70  YLNQKG---------TMEEVRALGEENRKVFEAM-----GLVADYVYGSEFQLKDEYTID 115

Query: 140 LLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGG 199
           + + +    ++NR      V +R + E         Y ++Q  D   L  +    + +GG
Sbjct: 116 VYK-LALSTTLNRARRSMEVIAR-EDENP-KVASVVYPLMQVNDIKHLNAD----VAVGG 168

Query: 200 SDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKE 250
            +Q    +   ++   +       + +P+LT   G  KM  +    I ++ +
Sbjct: 169 MEQRKIHMLSREILPSMGYKAPVCIHNPVLTGLDGEGKMSSSKGNFIAVDDD 220


>gi|146317775|ref|YP_001197487.1| tyrosyl-tRNA synthetase [Streptococcus suis 05ZYH33]
 gi|145688581|gb|ABP89087.1| Tyrosyl-tRNA synthetase [Streptococcus suis 05ZYH33]
          Length = 64

 Score = 84.1 bits (207), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 13/61 (21%), Positives = 26/61 (42%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            L+V +G   S  +AR  +++ AI +N   + +    +   D        +  GKK + +
Sbjct: 2   ELLVTSGIVNSKRQAREDVQNGAIYVNGERVQDLDYTLSDSDKIDGELTVIRRGKKKYSV 61

Query: 414 C 414
            
Sbjct: 62  L 62


>gi|116754354|ref|YP_843472.1| tyrosyl-tRNA synthetase [Methanosaeta thermophila PT]
 gi|116665805|gb|ABK14832.1| tyrosyl-tRNA synthetase [Methanosaeta thermophila PT]
          Length = 325

 Score = 84.1 bits (207), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 48/325 (14%), Positives = 108/325 (33%), Gaps = 45/325 (13%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            L  R     ++     ++L ++    AY+GY+ T+ ++H GH+     L  +Q+ G   
Sbjct: 5   ELVIRNTEEVVTLEELQEMLDAREHPRAYVGYE-TSGNIHLGHMLTANKLLDMQRAGFDV 63

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           + L+    + + +             +E++   +        FI  G        +    
Sbjct: 64  VVLLADLHAFLNEKG---------SLEEVRRIADY---NRECFIALGLDPERTEFVYGTE 111

Query: 131 WLCSIKYIDLLREIGSFFSVNRML-SFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
           +    +Y+  + ++    ++NR   S + V      E  +   +  Y ++QA D  +L  
Sbjct: 112 YQLRPEYVIKVLQMARNTTLNRARRSMDEVSR--SAENPM-VSQMIYPLMQAVDIADLK- 167

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
                + +GG DQ    +   +   +L  P    + +PL+    G KM  +    I +++
Sbjct: 168 ---IDVAVGGMDQRKIHMLAREELPKLGFPAPVCIHTPLIPGLDGKKMSSSKGNNIAVDE 224

Query: 250 EMT------------------------SPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID 285
                                        Y+ +    ++       F    T      ++
Sbjct: 225 PAEEIERKILAAYCPAKITENNPITEIFKYHIFPRVDSVTVRRPAKFGGDATFESYRALE 284

Query: 286 RMAKLQGKEINEAKKIIATEITTMV 310
                      + KK  A  +  ++
Sbjct: 285 ESFVNGSLHPLDLKKACAEYMIKIL 309


>gi|126459506|ref|YP_001055784.1| tyrosyl-tRNA synthetase [Pyrobaculum calidifontis JCM 11548]
 gi|126249227|gb|ABO08318.1| tyrosyl-tRNA synthetase [Pyrobaculum calidifontis JCM 11548]
          Length = 336

 Score = 83.7 bits (206), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 62/297 (20%), Positives = 111/297 (37%), Gaps = 41/297 (13%)

Query: 21  ISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSI 80
           ++    L +    G   AY+G++     +H G L     L  LQ+ G   + L+    + 
Sbjct: 33  VTKEEFLRL----GGGRAYLGFEPLWP-IHVGWLVWAYKLRELQEAGFDVVVLVATWHAW 87

Query: 81  IGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDL 140
           I D    +E RR     E+++ + K+        KY  G+  A             Y +L
Sbjct: 88  INDKGSLEELRR--HGDEVRQFLGKVAQ-----FKYVYGEELA---------KDPAYWEL 131

Query: 141 LREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGS 200
              +    S+ R+     V  R   E  L F +  Y +LQ  D   L       + +GG 
Sbjct: 132 AVRVAKGASLARVRRATPVMGRRAEEVELDFAKLLYPVLQVADIFYL----GVDVAVGGV 187

Query: 201 DQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQY 260
           DQ    +   D+ E+L   K  AL +P++T+ SG   G+         +E+   Y  ++ 
Sbjct: 188 DQRRAHMLARDVAEKLGFKKPVALHTPIITSLSGV--GRMEGSH----REIDEVYAMYKM 241

Query: 261 WRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAK----KIIATEITTMVHGR 313
            ++   + +      +T  P  E+++          E +      +A  +    HG 
Sbjct: 242 SKSKPQSAI-----FVTD-PPEEVEKKVWAAYCPPREVRFNPVYELAAYLLIPYHGP 292


>gi|45357826|ref|NP_987383.1| tyrosyl-tRNA synthetase [Methanococcus maripaludis S2]
 gi|74555880|sp|Q6M0K7|SYY_METMP RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|45047386|emb|CAF29819.1| Tyrosyl-tRNA synthetase [Methanococcus maripaludis S2]
          Length = 319

 Score = 83.3 bits (205), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 45/232 (19%), Positives = 90/232 (38%), Gaps = 23/232 (9%)

Query: 20  QISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTS 79
           +I +  EL  L  +    AYIG++ +   +H GH  Q+  +  LQK G K + L+    +
Sbjct: 21  EIVSIEELTELLKKEEKIAYIGFEPSGR-IHMGHYLQIRKMIDLQKAGFKIVILLADLHA 79

Query: 80  IIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYID 139
            +                E++   E+ + +F +      G     +  +E  L     ID
Sbjct: 80  YLNQKG---------TMDEVRALGEENRKVFEAM-----GLVADYVYGSEFQLKDEYTID 125

Query: 140 LLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGG 199
           + + +    ++NR      V +R + E         Y ++Q  D   L  +    + +GG
Sbjct: 126 VYK-LALSTTLNRARRSMEVIAR-EDENP-KVASVVYPLMQVNDIKHLNAD----VAVGG 178

Query: 200 SDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKE 250
            +Q    +   ++   +       + +P+LT   G  KM  +    I ++ +
Sbjct: 179 MEQRKIHMLSREILPSMGYKAPVCIHNPVLTGLDGEGKMSSSKGNFIAVDDD 230


>gi|290558914|gb|EFD92302.1| tyrosyl-tRNA synthetase [Candidatus Parvarchaeum acidophilus
           ARMAN-5]
 gi|326422572|gb|EGD71967.1| Tyrosyl-tRNA synthetase [Candidatus Parvarchaeum acidophilus
           ARMAN-5_'5-way FS']
          Length = 344

 Score = 83.3 bits (205), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 53/233 (22%), Positives = 94/233 (40%), Gaps = 23/233 (9%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            L +R  +  I+     +++ +   +TAYIG   T  S+H GHL  L  LF  +K G   
Sbjct: 13  DLIKRNTLEVITLKDLEELISTGKPLTAYIGRAPTG-SIHLGHLIALGKLFDFEKAGIHT 71

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
             L+    + + D              E+ + ++  K        +   +     +    
Sbjct: 72  KILIADIHAALDDLKS--------GWDELDKRVDYTKKCIELAFDW---ERLPEFVRGSD 120

Query: 131 W-LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
           + L      D+L+ + +  +V R L   S  +R+K  +     E  Y I+QA D   L  
Sbjct: 121 FELSRSYVTDVLK-LSTLTTVERALHSASEVTRMKNPK---VSELIYPIMQALDEEYLDA 176

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTAS--GTKMGKT 240
           +    +Q+GG DQ        +  E+L   K   + +PL+++    GTKM  +
Sbjct: 177 D----IQLGGMDQRHIFGYAREYLEKLGYKKRVEIMTPLVSSIKGPGTKMSSS 225


>gi|159905077|ref|YP_001548739.1| tyrosyl-tRNA synthetase [Methanococcus maripaludis C6]
 gi|159886570|gb|ABX01507.1| tyrosyl-tRNA synthetase [Methanococcus maripaludis C6]
          Length = 311

 Score = 83.3 bits (205), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 44/227 (19%), Positives = 88/227 (38%), Gaps = 23/227 (10%)

Query: 25  RELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDP 84
            EL  L  +    AYIG++ +   +H GH  Q+  +  LQK G K + L+    + +   
Sbjct: 16  EELTELLKKEEKIAYIGFEPSGR-IHMGHYLQIKKMIDLQKAGFKIVILLADLHAYLNQK 74

Query: 85  SFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREI 144
                       +E++   E+ + +F +      G     +  +E  L     ID+ + +
Sbjct: 75  G---------TMEEVRALGEENRKVFEAM-----GLVADYVYGSEFQLKDEYTIDVYK-L 119

Query: 145 GSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWG 204
               ++NR      V +R + E         Y ++Q  D   L  +    + +GG +Q  
Sbjct: 120 ALSTTLNRARRSMEVIAR-EDENP-KVASVVYPLMQVNDIKHLNAD----VAVGGMEQRK 173

Query: 205 NIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKE 250
             +   ++   +       + +P+LT   G  KM  +    I ++ +
Sbjct: 174 IHMLSREILPSMGYKAPVCIHNPVLTGLDGEGKMSSSKGNFIAVDDD 220


>gi|255017198|ref|ZP_05289324.1| tyrosyl-tRNA synthetase [Listeria monocytogenes FSL F2-515]
          Length = 67

 Score = 82.9 bits (204), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 14/64 (21%), Positives = 25/64 (39%)

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
            L+  +V  G   S  +AR  + + AI IN     + +  +   D        +  GKK 
Sbjct: 1   NLVDWLVTLGIEPSKRQAREDVGNGAIYINGERQQDLEKIMDASDRIENKFTIVRRGKKK 60

Query: 411 HIIC 414
           + + 
Sbjct: 61  YFLV 64


>gi|332796353|ref|YP_004457853.1| tyrosyl-tRNA synthetase [Acidianus hospitalis W1]
 gi|332694088|gb|AEE93555.1| tyrosyl-tRNA synthetase [Acidianus hospitalis W1]
          Length = 344

 Score = 82.9 bits (204), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 50/259 (19%), Positives = 91/259 (35%), Gaps = 34/259 (13%)

Query: 21  ISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSI 80
           ++       L +   +T YIG++ +    H G L     +  L   G     LM    + 
Sbjct: 5   VTLDDLKKKLENNEKLTGYIGFEPSGLF-HIGWLIWAQKVKDLSNAGVSMTLLMATWHAW 63

Query: 81  IGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDL 140
           I D        ++    E+ +   K          YG   +   +++ E  +    Y +L
Sbjct: 64  IND--------KLNGDMELIKLAGKYA--IDVLSAYGLDMSKINVVDAEDIVKDKAYWEL 113

Query: 141 LREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGS 200
           + ++    ++ RM    ++  R   E  L   +  Y  +Q  D   L    D  + +GG+
Sbjct: 114 VLKVAKNTTLARMKRALTIMGRKSDEAELDTSKLFYPAMQVSDIFYL----DVDIALGGT 169

Query: 201 DQWGNIICGIDLGERLKTPKLFALTSPLLTTASG---------------TKMGKTLS-GA 244
           DQ    +   ++ E+    K+ A+ +PLL    G                KM K+    A
Sbjct: 170 DQRKAHMLAREIAEKFHRKKVIAIHTPLLVGLKGGQRMGNVEEDDLLSEIKMSKSKPENA 229

Query: 245 IWLNKEMTSPYNFWQYWRN 263
           I++N    SP         
Sbjct: 230 IFIN---DSPEEVTAKIMR 245


>gi|55377417|ref|YP_135267.1| tyrosyl-tRNA synthetase [Haloarcula marismortui ATCC 43049]
 gi|74553031|sp|Q5V4J1|SYY_HALMA RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|55230142|gb|AAV45561.1| tyrosyl-tRNA synthetase [Haloarcula marismortui ATCC 43049]
          Length = 346

 Score = 82.9 bits (204), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 41/223 (18%), Positives = 72/223 (32%), Gaps = 18/223 (8%)

Query: 20  QISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTS 79
           ++    EL  L  +   +AYIGY  T   +H GH T +  L    + G     L+    +
Sbjct: 16  EVVTEDELRTLFEESDPSAYIGYAPTGE-MHIGHFTTMRKLADFLRAGVDVTVLIADLHA 74

Query: 80  IIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY-GTGKTDALMLNNETW-LCSIKY 137
            + D               +       +      I+  G    D   +    + L     
Sbjct: 75  HLDD-----NKSPF---DLLDARSAYYETAIEGMIEAAGADPEDVTFVRGTDFQLDEEYT 126

Query: 138 IDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQM 197
           +++ R            +   V    + E   +     Y ++Q  D   L  +    +  
Sbjct: 127 LEMYRMAAETTISRTQRAASEVVR--ESESP-NLGGLIYPLMQTLDVKALDAD----IAY 179

Query: 198 GGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           GG DQ G  +   ++           L +PLL+  SG KM  +
Sbjct: 180 GGVDQRGIYMLSREILPDHGGESPICLFAPLLSGLSGGKMSAS 222


>gi|67463836|pdb|1U7X|A Chain A, Crystal Structure Of A Mutant M. Jannashii Tyrosyl-Trna
           Synthetase Specific For O-Methyl-Tyrosine
 gi|67463837|pdb|1U7X|B Chain B, Crystal Structure Of A Mutant M. Jannashii Tyrosyl-Trna
           Synthetase Specific For O-Methyl-Tyrosine
          Length = 312

 Score = 82.9 bits (204), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 54/316 (17%), Positives = 103/316 (32%), Gaps = 54/316 (17%)

Query: 20  QISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTS 79
           +I +  EL  +  +   +A IG++ +   +H GH  Q+  +  LQ  G   I L+    +
Sbjct: 13  EIISEEELREVLKKDEKSAQIGFEPSGK-IHLGHYLQIKKMIDLQNAGFDIIILLADLHA 71

Query: 80  IIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYID 139
            +      DE R+      I +  +K+        KY  G T          L     ++
Sbjct: 72  YLNQKGELDEIRK------IGDYNKKVFEAMGLKAKYVYGSTFQ--------LDKDYTLN 117

Query: 140 LLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGG 199
           + R            S E +    + E      E  Y I+Q              + +GG
Sbjct: 118 VYRLALKTTLKRARRSMELIAR--EDENP-KVAEVIYPIMQVNAIHY----PGVDVAVGG 170

Query: 200 SDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFW 258
            +Q    +   +L       K+  + +P+LT   G  KM  +    I ++    SP    
Sbjct: 171 MEQRKIHMLARELLP----KKVVCIHNPVLTGLDGEGKMSSSKGNFIAVD---DSPEEIR 223

Query: 259 QYWRNI----------DDADVVSFAKR--------------LTTLPMSEIDRMAKLQGKE 294
              +               ++  +                 LT     E++ + K +   
Sbjct: 224 AKIKKAYCPAGVVEGNPIMEIAKYFLEYPLTIKRPEKFGGDLTVNSYEELESLFKNKELH 283

Query: 295 INEAKKIIATEITTMV 310
             + K  +A E+  ++
Sbjct: 284 PMDLKNAVAEELIKIL 299


>gi|16329762|ref|NP_440490.1| tyrosyl-tRNA synthetase [Synechocystis sp. PCC 6803]
 gi|1652247|dbj|BAA17170.1| tyrosyl tRNA synthetase [Synechocystis sp. PCC 6803]
          Length = 78

 Score = 82.9 bits (204), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 18/78 (23%), Positives = 36/78 (46%), Gaps = 4/78 (5%)

Query: 336 MPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           MP  S++  E++  + L  L+  +G   S++E RR +K  A++++   + +   + +   
Sbjct: 1   MPEFSLA--EITFPVKLAYLLSASGLCPSSSEGRRQIKGGAVRLDGDRLGDVNQEYQKPQ 58

Query: 396 FDSTGNIKLSFGKKNHII 413
                   L  GKK  I 
Sbjct: 59  DLDGK--VLQVGKKKFIR 74


>gi|149241961|pdb|2HGZ|A Chain A, Crystal Structure Of A P-Benzoyl-L-Phenylalanyl-Trna
           Synthetase
          Length = 306

 Score = 82.6 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 54/316 (17%), Positives = 104/316 (32%), Gaps = 54/316 (17%)

Query: 20  QISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTS 79
           +I +  EL  +  +   +A IG++ +   +H GH  Q+  +  LQ  G   I L+    +
Sbjct: 12  EIISEEELREVLKKDEKSAGIGFEPSGK-IHLGHYLQIKKMIDLQNAGFDIIILLADLHA 70

Query: 80  IIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYID 139
            +      DE R+      I +  +K+        KY  G            L     ++
Sbjct: 71  YLNQKGELDEIRK------IGDYNKKVFEAMGLKAKYVYGSPFQ--------LDKDYTLN 116

Query: 140 LLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGG 199
           + R            S E +    + E      E  Y I+Q    V  +      + +GG
Sbjct: 117 VYRLALKTTLKRARRSMELIAR--EDENP-KVAEVIYPIMQ----VNTSHRLGVDVAVGG 169

Query: 200 SDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFW 258
            +Q    +   +L       K+  + +P+LT   G  KM  +    I ++    SP    
Sbjct: 170 MEQRKIHMLARELLP----KKVVMIHNPVLTGLDGEGKMSSSKGNFIAVD---DSPEEIR 222

Query: 259 QYWRNI----------DDADVVSFAKR--------------LTTLPMSEIDRMAKLQGKE 294
              +               ++  +                 LT     E++ + K +   
Sbjct: 223 AKIKKAYCPAGVVEGNPIMEIAKYFLEYPLTIKRPEKFGGDLTVNSYEELESLFKNKELH 282

Query: 295 INEAKKIIATEITTMV 310
             + K  +A E+  ++
Sbjct: 283 PMDLKNAVAEELIKIL 298


>gi|189096270|pdb|3D6U|A Chain A, Crystal Structure Of 4-(Trifluoromethyldiazirinyl)
           Phenylalanyl-Trna Synthetase
 gi|189096271|pdb|3D6V|A Chain A, Crystal Structure Of 4-(Trifluoromethyldiazirinyl)
           Phenylalanyl-Trna Synthetase
          Length = 314

 Score = 82.2 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 53/316 (16%), Positives = 103/316 (32%), Gaps = 54/316 (17%)

Query: 20  QISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTS 79
           +I +  EL  +  +   +A IG++ +   +H GH  Q+  +  LQ  G   I L+    +
Sbjct: 13  EIISEEELREVLKKDEKSAIIGFEPSGK-IHLGHYLQIKKMIDLQNAGFDIIILLADLFA 71

Query: 80  IIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYID 139
            +      DE R+      I +  +K+        KY  G +          L     ++
Sbjct: 72  YLNQKGELDEIRK------IGDYNKKVFEAMGLKAKYVYGSSFM--------LDKDYTLN 117

Query: 140 LLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGG 199
           + R            S E +    + E      E  Y I+Q              + +GG
Sbjct: 118 VYRLALKTTLKRARRSMELIAR--EDENP-KVAEVIYPIMQVNPLHY----EGVDVAVGG 170

Query: 200 SDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFW 258
            +Q    +   +L       K+  + +P+LT   G  KM  +    I ++    SP    
Sbjct: 171 MEQRKIHMLARELLP----KKVVCIHNPVLTGLDGEGKMSSSKGNFIAVD---DSPEEIR 223

Query: 259 QYWRNI----------DDADVVSFAKR--------------LTTLPMSEIDRMAKLQGKE 294
              +               ++  +                 LT     E++ + K +   
Sbjct: 224 AKIKKAYCPAGVVEGNPIMEIAKYFLEYPLTIKRPEKFGGDLTVNSYEELESLFKNKELH 283

Query: 295 INEAKKIIATEITTMV 310
             + K  +A E+  ++
Sbjct: 284 PMDLKNAVAEELIKIL 299


>gi|93278672|pdb|2AG6|A Chain A, Crystal Structure Of P-Bromo-L-Phenylalanine-Trna
           Sythetase In Complex With P-Bromo-L-Phenylalanine
          Length = 314

 Score = 82.2 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 53/316 (16%), Positives = 103/316 (32%), Gaps = 54/316 (17%)

Query: 20  QISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTS 79
           +I +  EL  +  +   +A IG++ +   +H GH  Q+  +  LQ  G   I L+    +
Sbjct: 13  EIISEEELREVLKKDEKSALIGFEPSGK-IHLGHYLQIKKMIDLQNAGFDIIILLADLHA 71

Query: 80  IIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYID 139
            +      DE R+      I +  +K+        KY  G +          L     ++
Sbjct: 72  YLNQKGELDEIRK------IGDYNKKVFEAMGLKAKYVYGSSFQ--------LDKDYTLN 117

Query: 140 LLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGG 199
           + R            S E +    + E      E  Y I+Q              + +GG
Sbjct: 118 VYRLALKTTLKRARRSMELIAR--EDENP-KVAEVIYPIMQVNPLHY----EGVDVAVGG 170

Query: 200 SDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFW 258
            +Q    +   +L       K+  + +P+LT   G  KM  +    I ++    SP    
Sbjct: 171 MEQRKIHMLARELLP----KKVVCIHNPVLTGLDGEGKMSSSKGNFIAVD---DSPEEIR 223

Query: 259 QYWRNI----------DDADVVSFAKR--------------LTTLPMSEIDRMAKLQGKE 294
              +               ++  +                 LT     E++ + K +   
Sbjct: 224 AKIKKAYCPAGVVEGNPIMEIAKYFLEYPLTIKRPEKFGGDLTVNSYEELESLFKNKELH 283

Query: 295 INEAKKIIATEITTMV 310
             + K  +A E+  ++
Sbjct: 284 PMDLKNAVAEELIKIL 299


>gi|269986421|gb|EEZ92708.1| tyrosyl-tRNA synthetase [Candidatus Parvarchaeum acidiphilum
           ARMAN-4]
          Length = 343

 Score = 82.2 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 50/236 (21%), Positives = 93/236 (39%), Gaps = 26/236 (11%)

Query: 9   LSILSERGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           L I+  R  +  I+   +L  L ++G  ++ YIG   T  S+H GHL  L  LF  ++ G
Sbjct: 11  LDIIK-RNTLEIIT-LEDLRSLLNEGKPLSVYIGRAPTG-SIHLGHLVALGKLFDFERAG 67

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
                L+    + + D   +          E+ + ++  K        +   +     + 
Sbjct: 68  IHSKILIADLHAALDDLKSK--------WDELDKRVDYTKKCIELSFDW---ERVPEFVR 116

Query: 128 NETW-LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
              + L      DLL+ + +  +  +     S  +R+K  +     E  Y ++Q  D   
Sbjct: 117 GSDFELSQPYVSDLLK-LSTLTTAEKATHAASEVTRMKNPK---VSELIYPLMQTLDEEY 172

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTAS--GTKMGKT 240
           L    D  +Q+GG DQ        +  ++L   K   + +PL+ +    GTKM  +
Sbjct: 173 L----DVDIQLGGMDQRHIFAYAREYLQKLGYRKRVEVLTPLIASIRGPGTKMSSS 224


>gi|261403591|ref|YP_003247815.1| tyrosyl-tRNA synthetase [Methanocaldococcus vulcanius M7]
 gi|261370584|gb|ACX73333.1| tyrosyl-tRNA synthetase [Methanocaldococcus vulcanius M7]
          Length = 313

 Score = 81.8 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 52/316 (16%), Positives = 110/316 (34%), Gaps = 54/316 (17%)

Query: 20  QISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTS 79
           +I    EL  +  +   +AYIG++ +   +H GH  Q+  +  LQ  G   I L+    +
Sbjct: 20  EIITEDELKEVLKKDSKSAYIGFEPSGK-IHLGHYLQIKKMIDLQNAGFDIIILLADLHA 78

Query: 80  IIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYID 139
            +      ++   +   ++I +  +++        KY  G    L      +  ++  + 
Sbjct: 79  YL------NQKGELEEIKKIGDYNKRVFEAMGLRAKYVYGSEFQLD---SDYTLNVYKLA 129

Query: 140 LLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGG 199
           L   +        +++ E        E      E  Y I+Q  D   L       + +GG
Sbjct: 130 LKTTLKRARRSMELIARE-------DENP-KVAEVIYPIMQVNDINYL----GVDVAVGG 177

Query: 200 SDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFW 258
            +Q    +   +L       K+  + +P+LT   G  KM  +    I ++    SP +  
Sbjct: 178 MEQRKIHMLARELLP----KKVVCIHNPVLTGLDGEGKMSSSKGNFIAVD---DSPEDIR 230

Query: 259 QYWRN-------IDDADVVSFAKRLTTLPM-----------------SEIDRMAKLQGKE 294
              +        ++   ++  AK     P+                  E++ +   +   
Sbjct: 231 AKIKKAYCPAGVVEGNPIIEIAKYFLEYPLTIKRPEKFGGDLVVNDYEELESLFVGKKLH 290

Query: 295 INEAKKIIATEITTMV 310
             + K  +A EI  ++
Sbjct: 291 PVDLKNAVAEEIIKIL 306


>gi|93278581|pdb|1ZH0|A Chain A, Crystal Structure Of L-3-(2-Napthyl)alanine-Trna
           Synthetasein Complex With L-3-(2-Napthyl)alanine
          Length = 314

 Score = 81.8 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 53/316 (16%), Positives = 103/316 (32%), Gaps = 54/316 (17%)

Query: 20  QISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTS 79
           +I +  EL  +  +   +A IG++ +   +H GH  Q+  +  LQ  G   I L+    +
Sbjct: 13  EIISEEELREVLKKDEKSALIGFEPSGK-IHLGHYLQIKKMIDLQNAGFDIIILLADLHA 71

Query: 80  IIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYID 139
            +      DE R+      I +  +K+        KY  G +          L     ++
Sbjct: 72  YLNQKGELDEIRK------IGDYNKKVFEAMGLKAKYVYGSSFQ--------LDKDYTLN 117

Query: 140 LLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGG 199
           + R            S E +    + E      E  Y I+Q              + +GG
Sbjct: 118 VYRLALKTTLKRARRSMELIAR--EDENP-KVAEVIYPIMQVNPAHY----QGVDVVVGG 170

Query: 200 SDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFW 258
            +Q    +   +L       K+  + +P+LT   G  KM  +    I ++    SP    
Sbjct: 171 MEQRKIHMLARELLP----KKVVCIHNPVLTGLDGEGKMSSSKGNFIAVD---DSPEEIR 223

Query: 259 QYWRNI----------DDADVVSFAKR--------------LTTLPMSEIDRMAKLQGKE 294
              +               ++  +                 LT     E++ + K +   
Sbjct: 224 AKIKKAYCPAGVVEGNPIMEIAKYFLEYPLTIKRPEKFGGDLTVNSYEELESLFKNKELH 283

Query: 295 INEAKKIIATEITTMV 310
             + K  +A E+  ++
Sbjct: 284 PMDLKNAVAEELIKIL 299


>gi|15679755|ref|NP_276873.1| tyrosyl-tRNA synthetase [Methanothermobacter thermautotrophicus
           str. Delta H]
 gi|3334364|sp|O27795|SYY_METTH RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|2622897|gb|AAB86233.1| tyrosyl-tRNA synthetase [Methanothermobacter thermautotrophicus
           str. Delta H]
          Length = 319

 Score = 81.4 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 44/248 (17%), Positives = 87/248 (35%), Gaps = 23/248 (9%)

Query: 15  RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLM 74
           R  +  I+    +D+L     V  Y GY+ +   +H GH   +  L  LQ  G +   L+
Sbjct: 10  RDVLEVITPEELMDVLKKDEPV-VYTGYEPSGR-IHLGHALTVRKLRELQDAGFRVKILL 67

Query: 75  GGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCS 134
               + +   + +         + I+E  +        F+  G        +   ++   
Sbjct: 68  ADYHAYL---NGKG------SMERIRELADY---NQKCFLALGLSPERTEFILGSSFQTE 115

Query: 135 IKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYDFVELAKNYDC 193
            +Y DL+  +     +  +L  +   +++ RE       E  Y ++Q  D V L      
Sbjct: 116 PEYTDLVYRLA---LITTLLRAKRSMAQITRESRDHKVAEVIYPLMQVIDMVYL----GV 168

Query: 194 RLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEMT 252
            + +GG +Q    +   +   RL       + +PLL    G  KM  +    I ++    
Sbjct: 169 DVALGGMEQRKIHMLARENLPRLGFDAPVCIHTPLLHGTDGSEKMSSSKGNFIAVDDSPD 228

Query: 253 SPYNFWQY 260
                 + 
Sbjct: 229 EIREKVKK 236


>gi|93278582|pdb|1ZH6|A Chain A, Crystal Structure Of P-Acetylphenylalanine-Trna Synthetase
           In Complex With P-Acetylphenylalanine
          Length = 314

 Score = 81.4 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 53/316 (16%), Positives = 102/316 (32%), Gaps = 54/316 (17%)

Query: 20  QISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTS 79
           +I +  EL  +  +   +A IG++ +   +H GH  Q+  +  LQ  G   I L+    +
Sbjct: 13  EIISEEELREVLKKDEKSALIGFEPSGK-IHLGHYLQIKKMIDLQNAGFDIIILLADLHA 71

Query: 80  IIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYID 139
            +      DE R+      I +  +K+        KY  G            L     ++
Sbjct: 72  YLNQKGELDEIRK------IGDYNKKVFEAMGLKAKYVYGSEFQ--------LDKDYTLN 117

Query: 140 LLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGG 199
           + R            S E +    + E      E  Y I+Q              + +GG
Sbjct: 118 VYRLALKTTLKRARRSMELIAR--EDENP-KVAEVIYPIMQVNGCHY----RGVDVAVGG 170

Query: 200 SDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFW 258
            +Q    +   +L       K+  + +P+LT   G  KM  +    I ++    SP    
Sbjct: 171 MEQRKIHMLARELLP----KKVVCIHNPVLTGLDGEGKMSSSKGNFIAVD---DSPEEIR 223

Query: 259 QYWRNI----------DDADVVSFAKR--------------LTTLPMSEIDRMAKLQGKE 294
              +               ++  +                 LT     E++ + K +   
Sbjct: 224 AKIKKAYCPAGVVEGNPIMEIAKYFLEYPLTIKRPEKFGGDLTVNSYEELESLFKNKELH 283

Query: 295 INEAKKIIATEITTMV 310
             + K  +A E+  ++
Sbjct: 284 PMDLKNAVAEELIKIL 299


>gi|167013270|pdb|2PXH|A Chain A, Crystal Structure Of A Bipyridylalanyl-Trna Synthetase
          Length = 314

 Score = 81.4 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 51/316 (16%), Positives = 102/316 (32%), Gaps = 54/316 (17%)

Query: 20  QISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTS 79
           +I +  EL  +  +   +A IG++ +   +H GH  Q+  +  LQ  G   I  +    +
Sbjct: 13  EIISEEELREVLKKDEKSAGIGFEPSGK-IHLGHYLQIKKMIDLQNAGFDIIIYLADLAA 71

Query: 80  IIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYID 139
            +      DE R+      I +  +K+        KY  G            L     ++
Sbjct: 72  YLNQKGELDEIRK------IGDYNKKVFEAMGLKAKYVYGSEFQ--------LDKDYTLN 117

Query: 140 LLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGG 199
           + R            S E +    + E      E  Y I++   +          + +GG
Sbjct: 118 VYRLALKTTLKRARRSMELIAR--EDENP-KVAEVIYPIMEVNGWHY----SGVDVAVGG 170

Query: 200 SDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFW 258
            +Q    +   +L       K+  + +P+LT   G  KM  +    I ++    SP    
Sbjct: 171 MEQRKIHMLARELLP----KKVVCIHNPVLTGLDGEGKMSSSKGNFIAVD---DSPEEIR 223

Query: 259 QYWRNI----------DDADVVSFAKR--------------LTTLPMSEIDRMAKLQGKE 294
              +               ++  +                 LT     E++ + K +   
Sbjct: 224 AKIKKAYCPAGVVEGNPIMEIAKYFLEYPLTIKRPEKFGGDLTVNSYEELESLFKNKELH 283

Query: 295 INEAKKIIATEITTMV 310
             + K  +A E+  ++
Sbjct: 284 PMDLKNAVAEELIKIL 299


>gi|18312976|ref|NP_559643.1| tyrosyl-tRNA synthetase [Pyrobaculum aerophilum str. IM2]
 gi|74563801|sp|Q8ZW77|SYY2_PYRAE RecName: Full=Tyrosyl-tRNA synthetase 2; AltName:
           Full=Tyrosine--tRNA ligase 2; Short=TyrRS 2
 gi|18160474|gb|AAL63825.1| tyrosyl-tRNA synthetase [Pyrobaculum aerophilum str. IM2]
          Length = 316

 Score = 81.4 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 61/347 (17%), Positives = 126/347 (36%), Gaps = 48/347 (13%)

Query: 21  ISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSI 80
           ++    L +       +AY+G++     +H G L     L  L++ G   I L+    + 
Sbjct: 12  VTREEFLRL----KGGSAYLGFEPLWP-IHIGWLIWAYKLAELKEAGFDVIVLVATWHAW 66

Query: 81  IGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDL 140
           I D             +E++ + E+++ +     K+     D +  + + W       +L
Sbjct: 67  INDKG---------SIEELRAHGERVRAVLDRIGKFKYVYGDDVAKDPKYW-------EL 110

Query: 141 LREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGS 200
           + +I    S+ R+     V  R   E  L F +  Y ++Q  D   L       + +GG 
Sbjct: 111 VVKIAKETSLARVKRATPVMGRRAEEVELDFSKLMYPLMQVADIFYL----GVDVAVGGM 166

Query: 201 DQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQY 260
           DQ    +   D+ E+L   K  AL +P++T+ SGT            ++E+   Y  ++ 
Sbjct: 167 DQRRAHMLARDVAEKLGLKKPIALHTPIITSLSGT------GRMEGTHREIDEVYAMYKM 220

Query: 261 WRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAK----KIIATEITTMVHGREEA 316
            ++   + +      +T     ++ +          E K      IA  +    HG  E 
Sbjct: 221 SKSKPQSAI-----LITD-SEEDVRKKIWAAYCPPRETKFNPVFEIAAYLLIPYHGPLEI 274

Query: 317 EKAATAAMECFDMSIHSQHMPTISISKDEVSRGM--GLLTLIVKAGF 361
           +          + +   +      ++  E+   +   L+ L+ K   
Sbjct: 275 KGRRYE-----EGNALERDYREGVVTPQELKEAVASALVGLLSKLKL 316


>gi|304314111|ref|YP_003849258.1| tyrosyl-tRNA synthetase [Methanothermobacter marburgensis str.
           Marburg]
 gi|302587570|gb|ADL57945.1| tyrosyl-tRNA synthetase [Methanothermobacter marburgensis str.
           Marburg]
          Length = 319

 Score = 80.6 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 44/239 (18%), Positives = 87/239 (36%), Gaps = 23/239 (9%)

Query: 15  RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLM 74
           R  +  I+    L+++     V  Y GY+ +   +H GH   +  L  LQ  G +   L+
Sbjct: 10  RDVLEVITPDELLEVMKKDEPV-VYTGYEPSGK-VHLGHAITIRKLRELQDAGFRVKILL 67

Query: 75  GGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCS 134
               + +   + +         + I+E  +  +     F+  G        +   ++   
Sbjct: 68  ADYHAYL---NGKG------SMERIREMADYNRKC---FLALGLSPDRTEFVLGSSFQTQ 115

Query: 135 IKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDFVELAKNYDC 193
            +Y DL   +     +  +L      +++ RE +     E  Y ++Q  D V L    D 
Sbjct: 116 PEYTDL---VYRMALITTLLRARRSMAQITRESEDHKVAEVIYPLMQVIDMVYL----DV 168

Query: 194 RLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKEM 251
            + +GG +Q    +   +   RL       + +PLL    G  KM  +    I ++   
Sbjct: 169 DVALGGMEQRKIHMLARENLPRLGFDAPVCIHTPLLHGTDGSEKMSSSKGNFIAVDDSP 227


>gi|222480911|ref|YP_002567148.1| tyrosyl-tRNA synthetase [Halorubrum lacusprofundi ATCC 49239]
 gi|254783608|sp|B9LTA6|SYY_HALLT RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|222453813|gb|ACM58078.1| tyrosyl-tRNA synthetase [Halorubrum lacusprofundi ATCC 49239]
          Length = 328

 Score = 80.6 bits (198), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 42/233 (18%), Positives = 82/233 (35%), Gaps = 22/233 (9%)

Query: 15  RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLM 74
           R     ++      +        AY+GY+ +   LH GH+     L  LQ+ G +   L+
Sbjct: 9   RNAAEVVTEEEIEAMADDPDGKRAYVGYEPSGV-LHIGHMLTANKLIDLQEAGFEVTVLL 67

Query: 75  GGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCS 134
               + + D             +EI+   E+++     FI YG  +++   +    +   
Sbjct: 68  ADVHAYLNDKGSF---------EEIRHTAERMRDQ---FIAYGLDESNTQFVLGSDF--- 112

Query: 135 IKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCR 194
               D   ++ S      +   E   + +    S+   +  Y ++QA D   L       
Sbjct: 113 QLDDDYTLDLHSLELETTLARAERAMAEITSGDSVKVSQAVYPLMQALDIPYL----GVD 168

Query: 195 LQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLL--TTASGTKMGKTLSGAI 245
           L +GG +Q    +   D+   +      +L +PL+        KM  +    I
Sbjct: 169 LAVGGMEQRKVHMLARDVLPSIDREPPTSLHTPLIADLGTGRGKMSSSEGVTI 221


>gi|84489173|ref|YP_447405.1| tyrosyl-tRNA synthetase [Methanosphaera stadtmanae DSM 3091]
 gi|108861905|sp|Q2NHE1|SYY_METST RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|84372492|gb|ABC56762.1| TyrS [Methanosphaera stadtmanae DSM 3091]
          Length = 318

 Score = 80.2 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 39/234 (16%), Positives = 78/234 (33%), Gaps = 23/234 (9%)

Query: 19  HQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGT 78
            +I    EL  L  +    AY+G++ +   +H GH   +  +  LQ  G K    +    
Sbjct: 15  AEIIEVEELKELLKKDEKRAYVGFEPSGK-VHLGHALTIKKMKTLQDAGFKITIFIANLH 73

Query: 79  SIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYI 138
           +             +     + E  E  K     F   G  +    +L            
Sbjct: 74  AY------------LNNKGTLDELNEVAKYNIKCFKALGLSEDTNFIL-----GSDRMTP 116

Query: 139 DLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMG 198
           + + E+     +  +   +   + + R ++    +  Y I+QA D  +L  +       G
Sbjct: 117 EYITEVFKAAKLTTIQRAQRSMALVSRNETHDVAQTLYPIMQALDIHDLDADIAV----G 172

Query: 199 GSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEM 251
           G +Q    +   ++  RL       +  PL+    G+ KM  +    I ++   
Sbjct: 173 GMEQRKIHMLAREILPRLGYRPPVCIHIPLIHGTDGSDKMSSSKGNFIAIDDTP 226


>gi|292654317|ref|YP_003534214.1| tyrosyl-tRNA synthetase [Haloferax volcanii DS2]
 gi|291370444|gb|ADE02671.1| tyrosyl-tRNA synthetase [Haloferax volcanii DS2]
          Length = 328

 Score = 80.2 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 46/238 (19%), Positives = 86/238 (36%), Gaps = 24/238 (10%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            L  R     ++      +        AY+GY+ +   LH GH+     L  LQ  G + 
Sbjct: 5   DLITRNASEVVTEDEVRALADDPEGKRAYVGYEPSGV-LHIGHMLTANKLIDLQAAGFEV 63

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           + L+    + +   + +         +EI+E  E++K     FI YG  ++    +    
Sbjct: 64  VVLLADVHAYL---NGKG------TFEEIRETAERMKAQ---FIAYGLDESQTEFVLGSE 111

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
                     + ++ +      +   E   + +K    ++  +  Y I+QA D V L   
Sbjct: 112 ---YQLDESYVLDLHAVELETTLSRAERAMAEIKSGDGVTVAQAVYPIMQALDIVYL--- 165

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT---KMGKTLSGAI 245
            D  L +GG +Q    +   D    +       + +PL+    GT   KM  +    I
Sbjct: 166 -DVDLAIGGMEQRKVHMLARDTLPSIGEESPTCMHTPLIADL-GTGIGKMSSSEGVTI 221


>gi|150400018|ref|YP_001323785.1| tyrosyl-tRNA synthetase [Methanococcus vannielii SB]
 gi|166225537|sp|A6URQ1|SYY_METVS RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|150012721|gb|ABR55173.1| tyrosyl-tRNA synthetase [Methanococcus vannielii SB]
          Length = 319

 Score = 80.2 bits (197), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 44/233 (18%), Positives = 85/233 (36%), Gaps = 24/233 (10%)

Query: 20  QISNPRELDILCS-QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGT 78
           +I +  E++ L   +G   AYIG++ +   +H GH  Q+  +  LQK G K I L+    
Sbjct: 21  EIVSIEEMNELLKKEGEKIAYIGFEPSGK-IHLGHYLQIKKMIDLQKAGFKIIILLADLH 79

Query: 79  SIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYI 138
           + +               +EI+   E+ K  F S          +    NE +   +  +
Sbjct: 80  AYLNQKG---------TMEEIRALGEENKKAFESMGLIADYVYGSEFQLNEEYTIDVYKL 130

Query: 139 DLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMG 198
            L   +        +++ E        E         Y ++Q  D   L       + +G
Sbjct: 131 ALATTLNRAKRSMEVIARE-------DENP-KVASVVYPLMQVNDIKHLN----VDVAVG 178

Query: 199 GSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKE 250
           G +Q    +   ++   +       + +P+LT   G  KM  +    I ++ +
Sbjct: 179 GMEQRKIHMLSREILPNMGYKAPICIHNPILTGLDGEGKMSSSKGNLIAVDDD 231


>gi|310942792|pdb|3N2Y|A Chain A, Crystal Structure Of Tyrosyl-Trna Synthetase Complexed
           With P-(2- Tetrazolyl)-Phenylalanine
 gi|310942793|pdb|3N2Y|B Chain B, Crystal Structure Of Tyrosyl-Trna Synthetase Complexed
           With P-(2- Tetrazolyl)-Phenylalanine
          Length = 314

 Score = 79.9 bits (196), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 52/316 (16%), Positives = 103/316 (32%), Gaps = 54/316 (17%)

Query: 20  QISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTS 79
           +I +  EL  +  +   +A IG++ +   +H GH  Q+  +  LQ  G   I ++    +
Sbjct: 13  EIISEEELREVLKKDEKSALIGFEPSGK-IHLGHYLQIKKMIDLQNAGFDIIIILADLHA 71

Query: 80  IIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYID 139
            +      DE R+      I +  +K+        KY  G            L     ++
Sbjct: 72  YLNQKGELDEIRK------IGDYNKKVFEAMGLKAKYVYGSEFM--------LDKDYTLN 117

Query: 140 LLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGG 199
           + R            S E +    + E      E  Y I+Q      +       + +GG
Sbjct: 118 VYRLALKTTLKRARRSMELIAR--EDENP-KVAEVIYPIMQVNGIHYV----GGDVAVGG 170

Query: 200 SDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFW 258
            +Q    +   +L       K+  + +P+LT   G  KM  +    I ++    SP    
Sbjct: 171 MEQRKIHMLARELLP----KKVVCIHNPVLTGLDGEGKMSSSKGNFIAVD---DSPEEIR 223

Query: 259 QYWRNI----------DDADVVSFAKR--------------LTTLPMSEIDRMAKLQGKE 294
              +               ++  +                 LT     E++ + K +   
Sbjct: 224 AKIKKAYCPAGVVEGNPIMEIAKYFLEYPLTIKRPEKFGGDLTVNSYEELESLFKNKELH 283

Query: 295 INEAKKIIATEITTMV 310
             + K  +A E+  ++
Sbjct: 284 PMDLKNAVAEELIKIL 299


>gi|325958284|ref|YP_004289750.1| tyrosyl-tRNA synthetase [Methanobacterium sp. AL-21]
 gi|325329716|gb|ADZ08778.1| Tyrosyl-tRNA synthetase [Methanobacterium sp. AL-21]
          Length = 322

 Score = 79.1 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 45/265 (16%), Positives = 94/265 (35%), Gaps = 39/265 (14%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M   K+  L +++E           EL     +    AYIGY+ + + +H GH   +  +
Sbjct: 7   MENIKNGTLEVITE----------EELKDKLQEDKPVAYIGYEPSGN-IHLGHAITVKKM 55

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
             +QK G     L+    + +   + +         +EI+E  +     F +     + K
Sbjct: 56  IEIQKAGFHVKILLADLHAYL---NGKG------TLEEIEEISKYNMRCFRALG--LSEK 104

Query: 121 TDALMLNNE----TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNY 176
           T+ ++ ++      +   +  + L   +         ++ +S   +          E  Y
Sbjct: 105 TEFVLGSSYQTREDYTYKVYELALSTTLTRAKRSMAQITRDSADHK--------VAEVIY 156

Query: 177 MILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT- 235
            I+Q  D + L       L +GG +Q    +   +   ++       + +PLL    G+ 
Sbjct: 157 PIMQVLDMIFLK----VDLALGGMEQRKIHMLARESLPKMGYKAPVCIHTPLLHGTDGSD 212

Query: 236 KMGKTLSGAIWLNKEMTSPYNFWQY 260
           KM  +    I ++ E        Q 
Sbjct: 213 KMSSSKQNYIAIDDEPEVIKKKIQK 237


>gi|156836578|ref|XP_001642344.1| hypothetical protein Kpol_242p9 [Vanderwaltozyma polyspora DSM
          70294]
 gi|156112849|gb|EDO14486.1| hypothetical protein Kpol_242p9 [Vanderwaltozyma polyspora DSM
          70294]
          Length = 73

 Score = 78.7 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 26/60 (43%), Positives = 29/60 (48%), Gaps = 2/60 (3%)

Query: 2  PAFKSDFLSILSERGFIHQISNPREL--DILCSQGVVTAYIGYDLTASSLHAGHLTQLML 59
             K   L+ L ERG I QIS P  L    L     V  Y G D TA SLH G+L  LM+
Sbjct: 14 TVHKRSLLAELKERGLISQISQPESLLNKALQDGKRVKLYCGADPTARSLHLGNLVPLMI 73


>gi|124027763|ref|YP_001013083.1| tyrosyl-tRNA synthetase [Hyperthermus butylicus DSM 5456]
 gi|123978457|gb|ABM80738.1| Tyrosyl-tRNA synthetase [Hyperthermus butylicus DSM 5456]
          Length = 362

 Score = 78.7 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 53/344 (15%), Positives = 110/344 (31%), Gaps = 62/344 (18%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R  +  ++     + L S   +  YIG++ +    H G L     +  + + G    
Sbjct: 9   LITRNTVEVVTVEELREKLESGEKLKGYIGFEPSGLF-HIGWLVWAFKVKDMVEAGIDFY 67

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L     + I D             + I++    +  +  +    G  ++   +++ E  
Sbjct: 68  LLAATWHAWINDKFGG-------NMELIRKAARHVVDVLEAI---GVERSKVKVVDAEDL 117

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +   +Y  +L ++    ++ RM    ++  R   E  L F +  Y  +Q  D   L    
Sbjct: 118 VSDKEYWAILLKVAKSNTLARMKRALTIMGRRAEEAELDFSKLIYPAMQVTDIFYL---- 173

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT---------------- 235
           D  + +GG DQ    +   D  E+L   K+ A+ +PL+T+  G                 
Sbjct: 174 DLDIALGGIDQRKAHMLARDTAEKLGRKKVIAVHTPLITSLQGLGRMNPDQVDEETHAVE 233

Query: 236 -KMGKTLSGAIWLNKEMTSPYNFWQYWRNI----------DDADVVSFA-------KRLT 277
            KM K+             P    +                  ++  +        K + 
Sbjct: 234 FKMSKSKPETALF--VYDPPEEIERKILRAYCPARIVRYNPIIEINKYLLFSRPGFKLVV 291

Query: 278 TLPM-----------SEIDRMAKLQGKEINEAKKIIATEITTMV 310
             P             E++++         + KK  A  +  ++
Sbjct: 292 ERPEKYGGTVVIESYEELEKLYVEGKLHPLDLKKATAKALIELL 335


>gi|296108809|ref|YP_003615758.1| tyrosyl-tRNA synthetase [Methanocaldococcus infernus ME]
 gi|295433623|gb|ADG12794.1| tyrosyl-tRNA synthetase [Methanocaldococcus infernus ME]
          Length = 308

 Score = 78.3 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 50/295 (16%), Positives = 99/295 (33%), Gaps = 48/295 (16%)

Query: 38  AYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQ 97
           AYIG++ +   +H GH  Q+  +  L++ G   I L+    + +               +
Sbjct: 29  AYIGFEPSGK-IHLGHYLQIKKMMDLKEAGFDIIILLADLHAYLNQKG---------SLE 78

Query: 98  EIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFE 157
           EIQE  E  K +F +         +A  +    +     Y+  L  +    ++ R     
Sbjct: 79  EIQEIGEYNKKVFKAM------GLEANYIYGSEFQLERDYVLNLHRLALNTTLKRARRSM 132

Query: 158 SVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK 217
            + +R + E      E  Y I+Q  D   L    D  + +GG +Q    +   +L     
Sbjct: 133 ELIAR-EDENP-KVAEVIYPIMQVNDIYYL----DVDVAVGGMEQRKIHMLAREL----L 182

Query: 218 TPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQY-------WRNIDDADV 269
             K+  + +P+LT   G  KM  +    I ++          +               ++
Sbjct: 183 DKKVVCIHNPVLTGLDGEGKMSSSKGNFIAVDDSPEVIREKIKKAYCPIGEVEGNPILEI 242

Query: 270 VSFAKRL--------------TTLPMSEIDRMAKLQGKEINEAKKIIATEITTMV 310
             +                  T     E++   K +     + K  +A E+  ++
Sbjct: 243 AKYFLEYPLVVKRPEKFGGDVTFNSYEELETAYKNKELHPLDLKNAVAEELIKIL 297


>gi|76802047|ref|YP_327055.1| tyrosyl-tRNA synthetase [Natronomonas pharaonis DSM 2160]
 gi|108861906|sp|Q3IQU8|SYY_NATPD RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|76557912|emb|CAI49496.1| tyrosine--tRNA ligase [Natronomonas pharaonis DSM 2160]
          Length = 345

 Score = 77.9 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 58/294 (19%), Positives = 101/294 (34%), Gaps = 27/294 (9%)

Query: 11  ILSERGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
            L  R F  ++    E++ L  +    TAYIGY  T   +H GH T +  L      G  
Sbjct: 8   DLVAR-FTEEVIERDEIETLFEEQDEPTAYIGYAPTGE-MHIGHFTTMRKLADFIDAGLD 65

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY-GTGKTDALMLNN 128
              L+    + + D             + ++   E  +      I   G        +  
Sbjct: 66  VTVLVADLHAHLDDAKS--------PFELLEARSEYYERAIEGMIAAAGADPDGISFIRG 117

Query: 129 ETW-LCSIKYIDLLREIG-SFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
             + L     +DL R +  +  S  +    E VR   + E   S     Y ++QA D   
Sbjct: 118 TDFQLDEPYTLDLYRLLADTTLSRAQRAGSEVVR---QSENP-SLGSLVYTLMQALDVAA 173

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA-I 245
           L  +    +  GG DQ G  +   +        K   + +PLL+  SG KM  + +G+ I
Sbjct: 174 LDAD----IAYGGIDQRGIYMLAREQLPDHGYDKPACVFAPLLSGLSGGKMSASEAGSKI 229

Query: 246 WLNKEMTSPYNFWQYWR----NIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI 295
            L  +  +               ++  V+ + + L      + D    ++  E 
Sbjct: 230 NLTDDGEAIDEKIGGAYCPAGETEENGVLEYLEYLVFPVFDQRDTSFVVERPEK 283


>gi|171185257|ref|YP_001794176.1| tyrosyl-tRNA synthetase [Thermoproteus neutrophilus V24Sta]
 gi|170934469|gb|ACB39730.1| tyrosyl-tRNA synthetase [Thermoproteus neutrophilus V24Sta]
          Length = 319

 Score = 77.2 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 50/230 (21%), Positives = 87/230 (37%), Gaps = 38/230 (16%)

Query: 28  DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFR 87
           +   +     AY+G++     +H G L     L  L++ G   + L+    + I D    
Sbjct: 15  EEFLNLRGGVAYLGFEPLWP-IHVGWLVWAHKLAELREAGFDVVVLVATWHAWINDKG-- 71

Query: 88  DESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSF 147
                    +E++ + EK+K +     K+     D +  +   W       +L+ +    
Sbjct: 72  -------SLEELRSHGEKVKAVLDKIGKFKYVYGDEIAKDPRYW-------ELVVKTAKE 117

Query: 148 FSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNII 207
            S+ R+     V  R   E  L F +  Y I+Q  D   L       + +GG DQ    +
Sbjct: 118 TSLARVRRATPVMGRRTEEVELDFSKLLYPIMQVADIFYL----GVDVAVGGMDQRRAHM 173

Query: 208 CGIDLGERLKTPKLFALTSPLLTTASGT-----------------KMGKT 240
              D+ ERL   K  A+ +P++T+ SGT                 KM K+
Sbjct: 174 LARDVAERLGFKKPVAIHTPIITSLSGTGRMEGTHRELDEVYAMYKMSKS 223


>gi|294996639|ref|ZP_06802330.1| tyrosyl-tRNA synthetase [Mycobacterium tuberculosis 210]
          Length = 46

 Score = 77.2 bits (189), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 20/45 (44%), Positives = 25/45 (55%)

Query: 8  FLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAG 52
           L  LS RG I Q ++   L     +G +T Y G+D TA SLHAG
Sbjct: 2  ILDELSWRGLIAQSTDLDTLAAEAQRGPMTVYAGFDPTAPSLHAG 46


>gi|289809868|ref|ZP_06540497.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. AG3]
          Length = 55

 Score = 77.2 bits (189), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 15/52 (28%), Positives = 24/52 (46%)

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            S  +AR+ + SNA+ IN    S+ +     +D        L  GKKN+ + 
Sbjct: 1   PSRGQARKTIASNAVTINGEKQSDPEYIFNDEDRLFGRYTLLRRGKKNYCLI 52


>gi|145592304|ref|YP_001154306.1| tyrosyl-tRNA synthetase [Pyrobaculum arsenaticum DSM 13514]
 gi|145284072|gb|ABP51654.1| tyrosyl-tRNA synthetase [Pyrobaculum arsenaticum DSM 13514]
          Length = 314

 Score = 76.8 bits (188), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 46/230 (20%), Positives = 86/230 (37%), Gaps = 38/230 (16%)

Query: 28  DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFR 87
           + L +     AY+G++     +H G L     L  L++ G   + L+    + + D    
Sbjct: 14  EELLNMKGGLAYLGFEPLWP-IHVGWLVWAYKLAELKEAGFDVVILVATWHAWVNDKG-- 70

Query: 88  DESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSF 147
                     +++ + EK+  +     K+     D +  +   W       +L+  I   
Sbjct: 71  -------DISQLRAHGEKVIAVLDKIAKFRYVYGDEIAKDPRYW-------ELVMRIAKE 116

Query: 148 FSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNII 207
            S+ R+     +  R   E  L F +  Y ++Q  D   L       + +GG DQ    +
Sbjct: 117 TSLARIRRATPIMGRRAEEVELDFSKLLYPVMQVADIFYL----GVDVAVGGMDQRRAHM 172

Query: 208 CGIDLGERLKTPKLFALTSPLLTTASGT-----------------KMGKT 240
              D+ E+L   K  A+ +P++T+ SGT                 KM K+
Sbjct: 173 LARDVAEKLGFKKPVAIHTPIITSLSGTGRMEGTHREIDEVYALFKMSKS 222


>gi|7437494|pir||S77855 probable tyrosine-tRNA ligase (EC 6.1.1.1) - Mycoplasma capricolum
           (fragment)
          Length = 78

 Score = 76.4 bits (187), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 28/77 (36%), Positives = 38/77 (49%), Gaps = 6/77 (7%)

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
           +GG T +IGDPSF+   R +   Q++  NI KI       I           +NN  WL 
Sbjct: 8   IGGATGMIGDPSFKASERVLQTKQQVDHNINKISTQLKEII------PTVSFVNNRDWLE 61

Query: 134 SIKYIDLLREIGSFFSV 150
            I  ID LR+IG  F++
Sbjct: 62  DISLIDFLRDIGKHFNL 78


>gi|297620225|ref|YP_003708330.1| tyrosyl-tRNA synthetase [Methanococcus voltae A3]
 gi|297379202|gb|ADI37357.1| tyrosyl-tRNA synthetase [Methanococcus voltae A3]
          Length = 321

 Score = 76.4 bits (187), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 44/243 (18%), Positives = 85/243 (34%), Gaps = 29/243 (11%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
            K + + I+ E      +S+              AYIG++ +   +H GH  Q+  +  L
Sbjct: 10  IKRNTVEIIGEDDLKEMLSDETNKREKI------AYIGFEPSGK-IHMGHYLQIRKMMDL 62

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
            K G K + L+    + +               ++I +  E  K +F +      G    
Sbjct: 63  HKAGFKVVILLADFHAYLNQKG---------TLEDIGKLGEYNKSVFEAM-----GLEAE 108

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYD 183
            +  +E  L +    D+ +            S E +    + + +    E  Y ++QA D
Sbjct: 109 YIYGSEYQLGAKYTEDVYKLALRTTLKRARRSMEVIA---REDDNPKVAEVVYPLMQAND 165

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLS 242
              L       + +GG +Q    +   +L   +       L +P+L+   G  KM  +  
Sbjct: 166 IKHLN----VAVAVGGMEQRKIHVLARELLPNMDFESPICLHNPVLSGLDGVGKMSSSKG 221

Query: 243 GAI 245
             I
Sbjct: 222 NLI 224


>gi|150400632|ref|YP_001324398.1| tyrosyl-tRNA synthetase [Methanococcus aeolicus Nankai-3]
 gi|150013335|gb|ABR55786.1| tyrosyl-tRNA synthetase [Methanococcus aeolicus Nankai-3]
          Length = 317

 Score = 76.4 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 42/214 (19%), Positives = 83/214 (38%), Gaps = 23/214 (10%)

Query: 38  AYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQ 97
           AYIG++ +   +H GH  Q+  +  LQ  G K I L+    + +               +
Sbjct: 36  AYIGFEPSGR-IHLGHYLQIKKMIDLQNAGFKIIILLADLHAYLNQKG---------TME 85

Query: 98  EIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFE 157
           EI+E  E+ K +F +      G     +  +E  L     +D L ++    ++ R     
Sbjct: 86  EIKELAEQNKKVFDAI-----GLNATYIYGSEFQLKPEYNLD-LYKVAVNTTLKRARRSM 139

Query: 158 SVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK 217
            V +R   + +       Y ++Q  D   L  +    + +GG +Q    +   ++   + 
Sbjct: 140 EVIAR--EDDNPKVAGVVYPLMQVIDIKHLNAD----VAVGGMEQRKIHMLAREILPSMD 193

Query: 218 TPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKE 250
                 + +P+LT   G  KM  +    I ++ +
Sbjct: 194 YKAPVCIHNPVLTGLDGEGKMSSSKGNFIAVDDD 227


>gi|260910549|ref|ZP_05917217.1| tyrosine-tRNA ligase [Prevotella sp. oral taxon 472 str. F0295]
 gi|260635391|gb|EEX53413.1| tyrosine-tRNA ligase [Prevotella sp. oral taxon 472 str. F0295]
          Length = 75

 Score = 76.4 bits (187), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 11/68 (16%), Positives = 23/68 (33%), Gaps = 2/68 (2%)

Query: 349 GMGLLTLIV--KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
           G   + L          S  E R+ ++   + +N   +      +   D      + +  
Sbjct: 5   GQPAIDLFTREDVPVFPSKGEMRKLVQGGGVSLNKEKLVAADRPVTADDLIDGKYLLVQR 64

Query: 407 GKKNHIIC 414
           GKKN+ + 
Sbjct: 65  GKKNYYLL 72


>gi|169841662|ref|ZP_02874775.1| tyrosyl-tRNA synthetase [candidate division TM7 single-cell isolate
           TM7a]
          Length = 62

 Score = 75.6 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 25/62 (40%), Positives = 45/62 (72%)

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           +  + +P+ F+QYWRN+ DADV++  + LT LP+ +I+ M+  +G ++NEAK+I+A  +T
Sbjct: 1   SPSIDTPFEFYQYWRNLPDADVLTCLRMLTFLPLEQIEEMSLWEGAKLNEAKEILAMHLT 60

Query: 308 TM 309
            +
Sbjct: 61  EL 62


>gi|169840905|ref|ZP_02874018.1| tyrosyl-tRNA synthetase [candidate division TM7 single-cell isolate
           TM7a]
          Length = 58

 Score = 75.6 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 29/57 (50%), Positives = 35/57 (61%), Gaps = 2/57 (3%)

Query: 148 FSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWG 204
           F  N ML  +   +R+     LSFLEFNYMILQ+YDF  L  +Y C +Q GG DQW 
Sbjct: 3   FPYNNMLRAKCYENRMAN--GLSFLEFNYMILQSYDFYRLFLDYGCNMQFGGDDQWY 57


>gi|146304899|ref|YP_001192215.1| tyrosyl-tRNA synthetase [Metallosphaera sedula DSM 5348]
 gi|145703149|gb|ABP96291.1| tyrosyl-tRNA synthetase [Metallosphaera sedula DSM 5348]
          Length = 352

 Score = 75.2 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 50/262 (19%), Positives = 92/262 (35%), Gaps = 36/262 (13%)

Query: 19  HQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGG 77
            ++  P EL      G  +  Y+G++ +    H G L     +  L + G     L+   
Sbjct: 7   AEVVTPEELKEALESGRKLKGYLGFEPSGLF-HIGWLIWAQKVKDLLQAGVDMSLLVATW 65

Query: 78  TSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKY 137
            + I D    +         E+ +         +    +G  ++   +++ E  +    Y
Sbjct: 66  HAWINDKLGGN--------MEMIKLAGDYA--ITVLDSFGISRSKVHVIDAEDMVKDKDY 115

Query: 138 IDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQM 197
             L+  +    S+ RM    ++  R   E  L   +  Y  +Q  D   +    D  + +
Sbjct: 116 WSLVIRVAKNTSLARMKRALTIMGRKADEAELDSSKLIYPAMQVSDIFYM----DLDIAL 171

Query: 198 GGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG----------------TKMGKTL 241
           GG+DQ    +   D+ E+L   K+ A+ +PLL    G                 KM K+ 
Sbjct: 172 GGTDQRKAHMLARDVAEKLGKKKVIAIHTPLLVGLQGGQRMNPGVDEDDALADIKMSKSK 231

Query: 242 SG-AIWLNKEMTSPYNFWQYWR 262
              AI++N E   P        
Sbjct: 232 PETAIFINDE---PEEVEGKLM 250


>gi|300711379|ref|YP_003737193.1| tyrosyl-tRNA synthetase [Halalkalicoccus jeotgali B3]
 gi|299125062|gb|ADJ15401.1| tyrosyl-tRNA synthetase [Halalkalicoccus jeotgali B3]
          Length = 344

 Score = 75.2 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 41/211 (19%), Positives = 76/211 (36%), Gaps = 20/211 (9%)

Query: 37  TAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRS 96
           + YIGY  T   +H GH T +  L    + G     L+    + + D             
Sbjct: 33  SIYIGYAPTGE-MHIGHFTTIRKLADFLEAGIDVTVLIADLHAHLDDEKS--------PF 83

Query: 97  QEIQENIEKIKGIFSSFIK-YGTGKTDALMLNNETW-LCSIKYIDLLREIG-SFFSVNRM 153
           + ++      +    + ++  G    D   +    + L     ++L R +  +     + 
Sbjct: 84  ELLEARSAYYEAAIEAMVEASGADPGDIEFVRGTEFELEEPYTLELYRLLADTTLRRAQR 143

Query: 154 LSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLG 213
              E VR   + E         Y ++Q+ D   L  +    +  GG DQ G  +   ++ 
Sbjct: 144 AGSEVVR---QSENP-KLGGLVYTLMQSLDVAALDAD----IAYGGIDQRGIYMLAREIL 195

Query: 214 ERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
                 K   L +PLL+  SG KM  + +G+
Sbjct: 196 PEHGHEKPLCLFAPLLSGLSGGKMSASEAGS 226


>gi|322368229|ref|ZP_08042798.1| tyrosyl-tRNA synthetase [Haladaptatus paucihalophilus DX253]
 gi|320552245|gb|EFW93890.1| tyrosyl-tRNA synthetase [Haladaptatus paucihalophilus DX253]
          Length = 325

 Score = 75.2 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 58/342 (16%), Positives = 119/342 (34%), Gaps = 53/342 (15%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            L  R     ++     ++        AY+GY+ +   LH GH+     L  LQ+ G + 
Sbjct: 5   ELISRNAEELVTEAEVRELAEDPEGKRAYVGYEPSGV-LHIGHMLTANKLIDLQEAGFEV 63

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           + L+    + + D             +EI+E  E++K     FI YG  + +        
Sbjct: 64  VILLADVHAYLNDKGSF---------EEIRETAERMKEQ---FIAYGLDEENTEFRFGSE 111

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           +       D + ++ +      +       S ++  +S    +  Y ++Q+ D   L   
Sbjct: 112 F---QMDDDYVLDLHALELETTLNRASRAMSEIQSGESTKVSQAVYPLMQSLDIEYL--- 165

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPL---LTTASGTKMGKTLSGAIWL 247
            D  L +GG +Q    +   D    +       L +PL   L++  G KM  +    I +
Sbjct: 166 -DLDLAIGGMEQRKVHMLARDTLPSIGYESPTCLHTPLIAELSSGEG-KMSSSKGVTISM 223

Query: 248 ----------------------NKEMTSP------YNFWQYWRNIDDADVVSFAKRLTTL 279
                                 + ++ +P      Y+ +  + N+       +   L   
Sbjct: 224 EDSTEDIEEKVNGAFCPPTRDPDGDLENPVLQIFEYHVFPRFENVVVERPDKYGGNLEYD 283

Query: 280 PMSEIDRMAKLQGKEINEAKKIIATEITTMV-HGREEAEKAA 320
               ++   +       +AK  +AT +  ++  GRE+  +A 
Sbjct: 284 DYESLEDDLESGELHPADAKSALATYLDELIAPGREKLRQAE 325


>gi|119873262|ref|YP_931269.1| tyrosyl-tRNA synthetase [Pyrobaculum islandicum DSM 4184]
 gi|119674670|gb|ABL88926.1| tyrosyl-tRNA synthetase [Pyrobaculum islandicum DSM 4184]
          Length = 315

 Score = 74.9 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 49/220 (22%), Positives = 85/220 (38%), Gaps = 38/220 (17%)

Query: 38  AYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQ 97
           AY+G++     +H G L     L  L++ G   + L+    + I D             +
Sbjct: 25  AYLGFEPLWP-IHVGWLVWAYKLAELREAGFDVVVLVATWHAWINDKG---------ALE 74

Query: 98  EIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFE 157
           E++ + EK+K +     K+     D +  +   W       +L+ +     S+ R+    
Sbjct: 75  ELRSHGEKVKAVLDKIGKFKYVYGDEIARDPRYW-------ELVVKTAKETSLARVRRAT 127

Query: 158 SVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK 217
            V  R   E  L F +  Y I+Q  D   L       + +GG DQ    +   D+ E+L 
Sbjct: 128 PVMGRRMEEVELDFSKLLYPIMQVADIFYL----GVDVAVGGMDQRRAHMLARDVAEKLG 183

Query: 218 TPKLFALTSPLLTTASGT-----------------KMGKT 240
             K  A+ +P++T+ SGT                 KM K+
Sbjct: 184 FKKPVAIHTPIITSLSGTGRMEGTHRELDEVYAMYKMSKS 223


>gi|77413402|ref|ZP_00789595.1| tyrosyl-tRNA synthetase [Streptococcus agalactiae 515]
 gi|77160572|gb|EAO71690.1| tyrosyl-tRNA synthetase [Streptococcus agalactiae 515]
          Length = 45

 Score = 74.9 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 17/44 (38%), Positives = 23/44 (52%)

Query: 7  DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLH 50
          +    L ERG + Q ++   L     +G V+ Y GYD TA SLH
Sbjct: 2  NIFDELKERGLVFQTTDEDALRKALEEGSVSYYTGYDPTADSLH 45


>gi|302349168|ref|YP_003816806.1| Tyrosyl-tRNA synthetase [Acidilobus saccharovorans 345-15]
 gi|302329580|gb|ADL19775.1| Tyrosyl-tRNA synthetase [Acidilobus saccharovorans 345-15]
          Length = 358

 Score = 74.9 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 55/258 (21%), Positives = 96/258 (37%), Gaps = 31/258 (12%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R  +  I+     + + S   +  YIGY+ +  + H GHL  +  +  L + G +  
Sbjct: 9   LITRNLVEVITYDELKEKVSSGAQLKGYIGYEPSGLA-HIGHLIWMFKVKDLVEAGVQFN 67

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L     ++I D             + I+      + I  S             ++ ET 
Sbjct: 68  VLEATWHAMINDKFGG-------NMELIRRAAVLFREIMRSLDIPVD---RINFVDAETM 117

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +    Y  L+ ++    S+ RM    ++  R   E  L   +  Y  +Q  D + +    
Sbjct: 118 VSDKDYWALVLKVMKMTSLARMKRALTIMGRTMDEAELDSSKLVYPAMQVSDIIYM---- 173

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT---------------K 236
           D  + +GG DQ    +   ++ ER+   K+ AL +P+LT   G                K
Sbjct: 174 DLDIALGGLDQRKAHVLQREVAERMGRKKVIALHTPILTGLEGGKRMDNVESDEQAAAFK 233

Query: 237 MGKT-LSGAIWLNKEMTS 253
           M K+  S AI+LN     
Sbjct: 234 MSKSKASSAIFLNDSPEQ 251


>gi|169838726|ref|ZP_02871914.1| tyrosyl-tRNA synthetase [candidate division TM7 single-cell isolate
           TM7a]
          Length = 65

 Score = 74.9 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 29/67 (43%), Positives = 42/67 (62%), Gaps = 2/67 (2%)

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           I+L+GGGT +IGDPS R + R+++  ++I  N E  K   S FI++G  K  A M+NN  
Sbjct: 1   IALVGGGTGMIGDPSGRSDLRKVLTIEDIDHNCECFKKQMSCFIEFGENK--ARMVNNAD 58

Query: 131 WLCSIKY 137
           WL  + Y
Sbjct: 59  WLRDLNY 65


>gi|330834002|ref|YP_004408730.1| tyrosyl-tRNA synthetase [Metallosphaera cuprina Ar-4]
 gi|329566141|gb|AEB94246.1| tyrosyl-tRNA synthetase [Metallosphaera cuprina Ar-4]
          Length = 358

 Score = 72.9 bits (178), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 46/257 (17%), Positives = 88/257 (34%), Gaps = 32/257 (12%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R     +++      L     +  Y+G++ +    H G L        L + G +  
Sbjct: 7   LITRNAAEVVTSEELKQKLEEGRKLKGYLGFEPSGLF-HIGWLIWAQKFKDLMEAGVEMN 65

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+    + I D          +  +     +            +G  +    +++ E  
Sbjct: 66  LLVATWHAWINDKLGGKMEMIKLAGEYAVNVLNA----------FGISRNKINVIDAEDI 115

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +    Y  L+ ++    S+ RM    ++  R   E  L   +  Y  +Q  D   +    
Sbjct: 116 VKDKDYWSLVLKVAKNTSLARMKRALTIMGRKADEAELDSSKLIYPAMQVSDIFYM---- 171

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG----------------T 235
           D  + +GG+DQ    +   D  E+L   K+ A+ +PLL    G                 
Sbjct: 172 DLDIALGGTDQRKAHMLARDAAEKLGKKKVIAIHTPLLVGLQGGQRMSPGAEEDEVMAEI 231

Query: 236 KMGKTLSG-AIWLNKEM 251
           KM K+    AI+++ E 
Sbjct: 232 KMSKSKPDTAIFIDDEP 248


>gi|70605926|ref|YP_254796.1| tyrosyl-tRNA synthetase [Sulfolobus acidocaldarius DSM 639]
 gi|108861907|sp|Q4JCH6|SYY_SULAC RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|68566574|gb|AAY79503.1| tyrosyl-tRNA synthetase [Sulfolobus acidocaldarius DSM 639]
          Length = 361

 Score = 72.5 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 51/246 (20%), Positives = 91/246 (36%), Gaps = 37/246 (15%)

Query: 17  FIHQISNP----RELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
            I + ++      EL     +   +  YIG++ +    H G L     L  L K G    
Sbjct: 9   LITRNTDEVITIDELKKKLEENSKLKGYIGFEPSGLF-HIGWLIWAQKLKDLIKAGVDMS 67

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+    ++I D    D  +  +  +   E +E           +G   +   ++  E  
Sbjct: 68  ILVATWHAMINDKLGGDLEKIKLAGKYALEVLEG----------FGVDMSKLKVVYAEDL 117

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           + +I Y  L+ ++    S+ RM    ++  R   E  L   +  Y  +Q  D     ++ 
Sbjct: 118 VENIDYWSLVVKVAKNTSLARMKRALTIMGRRSEEAELDTSKLIYPAMQVSDIF--FQDL 175

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG----------------- 234
           D  L  GG+DQ    +   D+ E+L+  K+ A+ +PLL    G                 
Sbjct: 176 DIAL--GGTDQRKAHMLARDVAEKLQRKKVIAIHTPLLVGLQGGQRMNTEGLEEDDYLAT 233

Query: 235 TKMGKT 240
            KM K+
Sbjct: 234 IKMSKS 239


>gi|289580760|ref|YP_003479226.1| tyrosyl-tRNA synthetase [Natrialba magadii ATCC 43099]
 gi|289530313|gb|ADD04664.1| tyrosyl-tRNA synthetase [Natrialba magadii ATCC 43099]
          Length = 326

 Score = 72.2 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 51/239 (21%), Positives = 93/239 (38%), Gaps = 26/239 (10%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            L  R     +++    ++        AY+GY+ +   LH GHL     L  LQ  G + 
Sbjct: 5   DLITRNAEEVVTDEEVRELADEPDGTRAYVGYEPSGV-LHLGHLLTANKLIDLQDAGMEV 63

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           + L+    + +   + +         +EI+E  E++K     FI YG  + +   +    
Sbjct: 64  VVLLADVHAYL---NGKG------TFEEIRETAEQMKAQ---FIAYGLDEDNTEFVYGSE 111

Query: 131 W-LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
           + L     +D L E+    ++NR    +   + ++  ++       Y ++Q  D   L  
Sbjct: 112 FQLDEEYTLD-LHELELATTLNR---AQRAMAEIQGGETAKVSHVVYPLMQTLDIEYL-- 165

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPL---LTTASGTKMGKTLSGAI 245
             D  L +GG DQ    +   +    L      AL +P+   LT+  G KM  +    I
Sbjct: 166 --DLDLAVGGLDQRKVHMLAREELPELGYDVRPALHTPIIADLTSGEG-KMSSSEGVTI 221


>gi|227831059|ref|YP_002832839.1| tyrosyl-tRNA synthetase [Sulfolobus islandicus L.S.2.15]
 gi|229579940|ref|YP_002838339.1| tyrosyl-tRNA synthetase [Sulfolobus islandicus Y.G.57.14]
 gi|229585531|ref|YP_002844033.1| tyrosyl-tRNA synthetase [Sulfolobus islandicus M.16.27]
 gi|284998554|ref|YP_003420322.1| tyrosyl-tRNA synthetase [Sulfolobus islandicus L.D.8.5]
 gi|259517032|sp|C3N048|SYY_SULIA RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|259517038|sp|C3MJP1|SYY_SULIL RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|259517048|sp|C3N8R2|SYY_SULIY RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|227457507|gb|ACP36194.1| tyrosyl-tRNA synthetase [Sulfolobus islandicus L.S.2.15]
 gi|228010655|gb|ACP46417.1| tyrosyl-tRNA synthetase [Sulfolobus islandicus Y.G.57.14]
 gi|228020581|gb|ACP55988.1| tyrosyl-tRNA synthetase [Sulfolobus islandicus M.16.27]
 gi|284446450|gb|ADB87952.1| tyrosyl-tRNA synthetase [Sulfolobus islandicus L.D.8.5]
          Length = 361

 Score = 71.8 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 45/233 (19%), Positives = 85/233 (36%), Gaps = 16/233 (6%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            L  R     I+       L S+  +  YIG++ +    H G L     +  L + G   
Sbjct: 8   QLITRNAAEIITIDELRKKLESEEKLKGYIGFEPSGLF-HIGWLIWTQKVKDLVEAGVNM 66

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
             L     + I D    D          I+   +    +  +   YG   T   +++ + 
Sbjct: 67  TLLRATWHAWINDKLGGD-------LSLIKMAADYTVEVIKN---YGVDTTKLNIVDADD 116

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
            +    Y  L+ ++    S+ R+    ++  R   E  +   +  Y  +Q  D   L   
Sbjct: 117 MVKEKDYWALVIKVAKNASLARIKRALTIMGRRAEEAEIDASKLIYPAMQVSDIFYL--- 173

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLS 242
            D  + +GG+DQ    +   D+ E++   K+ ++ +PLL     G +M  T  
Sbjct: 174 -DLDIALGGTDQRKAHMLARDVAEKMGKKKIVSIHTPLLVGLQGGQRMSITEG 225


>gi|126465789|ref|YP_001040898.1| tyrosyl-tRNA synthetase [Staphylothermus marinus F1]
 gi|126014612|gb|ABN69990.1| tyrosyl-tRNA synthetase [Staphylothermus marinus F1]
          Length = 362

 Score = 71.8 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 54/310 (17%), Positives = 103/310 (33%), Gaps = 46/310 (14%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L+ R  +  I+      +   +     YIG++ +   +H G L  +  +  L + G    
Sbjct: 9   LASRNTVEVITLEDLKKVFEEKEHPRGYIGFEPSGL-VHVGWLVWMNKVRDLLEAGVDFY 67

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L     + I D    D          I++    ++ +      +G   +    ++ E  
Sbjct: 68  ILEATWHAYINDKLGGD-------MDLIRKAARLVRKVMEG---FGIDVSKIKFVDAEEL 117

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +    Y  +L       S+ R+    ++  R   E    F +  Y ++Q  D   L    
Sbjct: 118 VSDKDYWGILVRSAKNVSLARVKRALTIMGRKSEEAETDFSKLIYPLMQVSDIFYL---- 173

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG----------------- 234
           D  + +GG+DQ    +   D+ E++   K  A+ +P++T   G                 
Sbjct: 174 DLDIALGGTDQRKAHMLARDIAEKIGRKKPVAIHTPIITGLKGPGRRMDIVGEIDEVYAT 233

Query: 235 TKMGKTLSG-AIWLNKEMTSPYNFWQYWRNI----------DDADVVSFAKRLTTLPMSE 283
            KM K+    AI+++     P       R               ++  +    T      
Sbjct: 234 HKMSKSKPETAIFVH---DPPEEIRAKIRKAYCPPRETMFNPIIEINKYLLFATPGFKLY 290

Query: 284 IDRMAKLQGK 293
           IDR  K  G 
Sbjct: 291 IDRPEKYGGP 300


>gi|284165941|ref|YP_003404220.1| tyrosyl-tRNA synthetase [Haloterrigena turkmenica DSM 5511]
 gi|284015596|gb|ADB61547.1| tyrosyl-tRNA synthetase [Haloterrigena turkmenica DSM 5511]
          Length = 331

 Score = 71.8 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 64/328 (19%), Positives = 120/328 (36%), Gaps = 48/328 (14%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            L  R     +++    ++        AY+GY+ +   LH GHL     L  LQ+ G + 
Sbjct: 5   DLITRNAEEVVTDEEVRELADDPDGKRAYVGYEPSGV-LHLGHLLTANKLIDLQEAGMEV 63

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           + L+    + +   + +         +EI+E  E++K     FI YG  +     +    
Sbjct: 64  VVLLADVHAYL---NGKG------TFEEIRETAERMKAQ---FIAYGLDEESTEFVYGSE 111

Query: 131 W-LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
           + L     +D L E+    ++NR    +   + ++ +++       Y ++Q  D   L  
Sbjct: 112 FQLDEEYTLD-LHELELSTTMNR---AQRAMAEIQGDETAKVSHLVYPLMQTLDIEYL-- 165

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPL---LTTASGTKMGKTLSGAIW 246
             D  L +GG DQ    +   +    +      AL +P+   LT+  G KM  +    I 
Sbjct: 166 --DLDLAVGGLDQRKVHMLAREKLPEVDYEVRPALHTPIVADLTSGEG-KMSSSEGITI- 221

Query: 247 LNKEMTSPYNFWQYWRNI---------DDAD-------VVSFAKRLTTLPMSEI--DRMA 288
                 S  +  +   +           D D       V+   +        EI  +R  
Sbjct: 222 --SMEDSTEDLEEKVNSAYCPPTRDPEPDDDGNERENPVLELFEYHVFPRFDEIVVERPE 279

Query: 289 KLQGKEINEAKKIIATEI-TTMVHGREE 315
           K  G    EA K +A ++ +  +H  + 
Sbjct: 280 KYGGDLTYEAYKSLAADLESGELHPADA 307


>gi|227828301|ref|YP_002830081.1| tyrosyl-tRNA synthetase [Sulfolobus islandicus M.14.25]
 gi|238620493|ref|YP_002915319.1| tyrosyl-tRNA synthetase [Sulfolobus islandicus M.16.4]
 gi|259517035|sp|C4KJ87|SYY_SULIK RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|259517041|sp|C3MYZ9|SYY_SULIM RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|227460097|gb|ACP38783.1| tyrosyl-tRNA synthetase [Sulfolobus islandicus M.14.25]
 gi|238381563|gb|ACR42651.1| tyrosyl-tRNA synthetase [Sulfolobus islandicus M.16.4]
 gi|323475371|gb|ADX85977.1| tyrosyl-tRNA synthetase [Sulfolobus islandicus REY15A]
 gi|323478096|gb|ADX83334.1| tyrosyl-tRNA synthetase [Sulfolobus islandicus HVE10/4]
          Length = 361

 Score = 71.4 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 45/233 (19%), Positives = 85/233 (36%), Gaps = 16/233 (6%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            L  R     I+       L S+  +  YIG++ +    H G L     +  L + G   
Sbjct: 8   QLITRNAAEIITIDELRKKLESEEKLKGYIGFEPSGLF-HIGWLIWTQKVKDLVEAGVNM 66

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
             L     + I D    D          I+   +    +  +   YG   T   +++ + 
Sbjct: 67  TLLRATWHAWINDKLGGD-------LSLIKMAADYTVEVIKN---YGVDTTKLNIVDADD 116

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
            +    Y  L+ ++    S+ R+    ++  R   E  +   +  Y  +Q  D   L   
Sbjct: 117 MVKEKDYWALVIKVAKNSSLARIKRALTIMGRRAEEAEIDASKLIYPAMQVSDIFYL--- 173

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLS 242
            D  + +GG+DQ    +   D+ E++   K+ ++ +PLL     G +M  T  
Sbjct: 174 -DLDIALGGTDQRKAHMLARDVAEKMGKKKIVSIHTPLLVGLQGGQRMSITEG 225


>gi|297527541|ref|YP_003669565.1| tyrosyl-tRNA synthetase [Staphylothermus hellenicus DSM 12710]
 gi|297256457|gb|ADI32666.1| tyrosyl-tRNA synthetase [Staphylothermus hellenicus DSM 12710]
          Length = 362

 Score = 71.4 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 43/246 (17%), Positives = 88/246 (35%), Gaps = 32/246 (13%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L+ R  +  ++      +   +  +  YIG++ +   +H G L  +  +  L + G    
Sbjct: 9   LASRNTVEIVTLEDLKKVFEEKEHLRGYIGFEPSGL-VHVGWLVWMNKVRDLLEAGVDFY 67

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L     + I D    D          I++    ++ +      +G   +    ++ E  
Sbjct: 68  VLEATWHAYINDKLGGD-------LDLIRKAARLVRKVMEG---FGIDVSRIKFVDAEEL 117

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +    Y + L       S+ R+    ++  R   E    F +  Y ++Q  D   L    
Sbjct: 118 VSDKDYWETLIRSAKNVSLARVKRALTIMGRKSDEAETDFSKLIYPLMQVSDIFYL---- 173

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG----------------- 234
           D  + +GG+DQ    +   D+ E++   K  A+ +P++T   G                 
Sbjct: 174 DLDIVLGGTDQRKAHMLARDIAEKIGRKKPIAIHTPIITGLKGPGRRMDVVGEIDEVYAA 233

Query: 235 TKMGKT 240
            KM K+
Sbjct: 234 HKMSKS 239


>gi|305662965|ref|YP_003859253.1| tyrosyl-tRNA synthetase [Ignisphaera aggregans DSM 17230]
 gi|304377534|gb|ADM27373.1| tyrosyl-tRNA synthetase [Ignisphaera aggregans DSM 17230]
          Length = 361

 Score = 71.0 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 48/247 (19%), Positives = 90/247 (36%), Gaps = 32/247 (12%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            L +R  +  ++     +I  ++  +  YIG++ +    H G L        L   G + 
Sbjct: 8   ELVKRNTVEIVTEDELRNIFLNKKDIRGYIGFEPSGIF-HLGWLIWAYKFKDLVDAGVEM 66

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           I       + I D               I+     +  + S+    G   +   ++  E 
Sbjct: 67  ILYAATWHAWINDKLGG-------NMDLIRAAARHVAYVLSAI---GVNMSRVRIVYAED 116

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
            +  + Y + +  I    S++R+    ++  R   E  L F +  Y ++Q  D  E+   
Sbjct: 117 IVSRVSYWEKVLRIAKSSSLSRIKRALTILGRRADEAELDFSKLIYPLMQVADIFEM--- 173

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG---------------- 234
            D  + +GG DQ    +   D+ E+L   K  A+ +PLL +  G                
Sbjct: 174 -DLDIALGGLDQRKAHMLARDVAEKLGFKKPIAIHTPLLPSLKGVSRMSFEGMEIDDIAA 232

Query: 235 -TKMGKT 240
            TKM K+
Sbjct: 233 ETKMSKS 239


>gi|229581399|ref|YP_002839798.1| tyrosyl-tRNA synthetase [Sulfolobus islandicus Y.N.15.51]
 gi|259517044|sp|C3NMQ6|SYY_SULIN RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|228012115|gb|ACP47876.1| tyrosyl-tRNA synthetase [Sulfolobus islandicus Y.N.15.51]
          Length = 361

 Score = 71.0 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 44/233 (18%), Positives = 85/233 (36%), Gaps = 16/233 (6%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            L  R     I+       + S+  +  YIG++ +    H G L     +  L + G   
Sbjct: 8   QLITRNAAEIITIDELRKKIESEEKLKGYIGFEPSGLF-HIGWLIWTQKVKDLVEAGVNM 66

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
             L     + I D    D          I+   +    +  +   YG   T   +++ + 
Sbjct: 67  TLLRATWHAWINDKLGGD-------LSLIKMAADYTVEVIKN---YGVDTTKLNIVDADD 116

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
            +    Y  L+ ++    S+ R+    ++  R   E  +   +  Y  +Q  D   L   
Sbjct: 117 MVKEKDYWALVIKVAKNASLARIKRALTIMGRRAEEAEIDASKLIYPAMQVSDIFYL--- 173

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLS 242
            D  + +GG+DQ    +   D+ E++   K+ ++ +PLL     G +M  T  
Sbjct: 174 -DLDIALGGTDQRKAHMLARDVAEKMGKKKIVSIHTPLLVGLQGGQRMSITEG 225


>gi|297184802|gb|ADI20912.1| tyrosyl-tRNA synthetase [uncultured gamma proteobacterium
           EB080_L93H08]
          Length = 74

 Score = 71.0 bits (173), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 1/56 (1%)

Query: 193 CRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-TKMGKTLSGAIWL 247
             +++GG+DQ  N++ G  L +         +  PLL    G  KM K+ +  I L
Sbjct: 8   ADVELGGTDQKFNLLMGRHLQQIYGQKPQSVIMLPLLEGLDGIKKMSKSANNYIAL 63


>gi|313124873|ref|YP_004035137.1| tyrosyl-tRNA synthetase [Halogeometricum borinquense DSM 11551]
 gi|312291238|gb|ADQ65698.1| tyrosyl-tRNA synthetase [Halogeometricum borinquense DSM 11551]
          Length = 331

 Score = 70.6 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 44/229 (19%), Positives = 85/229 (37%), Gaps = 22/229 (9%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            L  R     ++      +        AY+GY+ +   LH GH+     L  LQ+ G + 
Sbjct: 5   DLITRNAAEVVTEDEARSLADDPDGKRAYVGYEPSGV-LHIGHMLTANKLIELQEAGFEV 63

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           + L+    + + D              EIQE   +++     F+ YG  +     +    
Sbjct: 64  VVLLADVHAYLNDKG---------TFDEIQETATRMQEQ---FVAYGLEEDQTEFVLGSE 111

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           +       D   ++ +      +   E   + +K   +++  +  Y ++QA D V L   
Sbjct: 112 F---QLDDDYTLDLHALELETSLSRAERAMAEIKSGDTVTVAQAVYPLMQALDIVYL--- 165

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGT-KM 237
            D  L +GG +Q    +   D    +       L +PL++  ++G  KM
Sbjct: 166 -DVDLAIGGMEQRKVHMLARDTLPSIDADAPTCLHTPLISDLSTGVGKM 213


>gi|218884548|ref|YP_002428930.1| tyrosyl-tRNA synthetase [Desulfurococcus kamchatkensis 1221n]
 gi|218766164|gb|ACL11563.1| tyrosyl-tRNA synthetase [Desulfurococcus kamchatkensis 1221n]
          Length = 361

 Score = 70.6 bits (172), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 49/245 (20%), Positives = 87/245 (35%), Gaps = 31/245 (12%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L+ R  +  I+      I   +     Y+G++ +   +H G L  +  +  L   G    
Sbjct: 9   LATRNVLEVITIEELRKIFEDKERPKGYLGFEPSGL-VHVGWLVWMFKVRDLVNAGVDFY 67

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L     + I D    D        + I++     + I  +    G  +T    ++ E  
Sbjct: 68  ILEATWHAYINDKLGGD-------IEMIRKAARYTRIILDAI---GVPETRIKYVDAEEL 117

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
               +Y  LL +     S+ R+    ++  R   E    F +  Y ++Q  D   L    
Sbjct: 118 ASDKEYWGLLLKAAKHSSLARVKRALTIMGRKMDEGETDFSKLIYPLMQVTDIFYL---- 173

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG----------------T 235
           D  + +GG DQ    +   D+ E+L   K  AL +P++T   G                 
Sbjct: 174 DLDIALGGMDQRKAHMLTRDIAEKLGRRKPVALHTPIITGLQGPSGRMEGREYDEIASDV 233

Query: 236 KMGKT 240
           KM K+
Sbjct: 234 KMSKS 238


>gi|195062144|ref|XP_001996142.1| GH13981 [Drosophila grimshawi]
 gi|193891934|gb|EDV90800.1| GH13981 [Drosophila grimshawi]
          Length = 431

 Score = 70.6 bits (172), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 66/337 (19%), Positives = 113/337 (33%), Gaps = 48/337 (14%)

Query: 12  LSERGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           L  RG      +   +  LC QG     Y G   ++ SLH GHL   M+  WLQ+T   P
Sbjct: 93  LIRRGIFFSHRDLHTILTLCEQGKPFYLYTGRGPSSESLHIGHLVPFMIAKWLQETFDVP 152

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           + +              D+ + + +  +I+E I+  +      I  G       + NN  
Sbjct: 153 LII-----------QLTDDEKSLWKDLKIEEAIKLARENAKDIIAVGFDVDKTFIFNNLE 201

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA-------YD 183
           ++     +       +   + + ++F  V+       S    +  +   QA       + 
Sbjct: 202 FMGKCPAM-----YQNIIRIQKCVTFNQVKGIFGFGDSDIIGKIGFPAAQAAPALSSTFP 256

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKL---FALTSPLLTTASGTKMGKT 240
           F+   +   C +     DQ        D+  RL  PK     +   P L  A  +KM  +
Sbjct: 257 FIFGNRKLHCLIPC-AIDQDPYFRMTRDVAPRLGFPKCALLHSTFFPALQGAK-SKMSAS 314

Query: 241 LSG-AIWLN------KEMTSPYNF---------WQYWRNIDDADV-VSFAKRL--TTLPM 281
            +  A++L       K   + Y F          +    I D DV     K        +
Sbjct: 315 ETNSAVFLTDTPKQIKNKINKYAFSGGRTTVEEHRQLGGIPDIDVAYQLLKFFLEDDDKL 374

Query: 282 SEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEK 318
            E+            E KK+    +T +V   + A K
Sbjct: 375 EEVRLAYSKGEMLTGEIKKLAIETVTPIVVAHQAARK 411


>gi|257388605|ref|YP_003178378.1| tyrosyl-tRNA synthetase [Halomicrobium mukohataei DSM 12286]
 gi|257170912|gb|ACV48671.1| tyrosyl-tRNA synthetase [Halomicrobium mukohataei DSM 12286]
          Length = 345

 Score = 69.8 bits (170), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 44/268 (16%), Positives = 88/268 (32%), Gaps = 23/268 (8%)

Query: 34  GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDP-SFRDESRR 92
           G  +AYIGY  T   +H GH T +  L    + G     L+    + + D  S  D    
Sbjct: 30  GTPSAYIGYAPTGE-MHIGHYTTMRKLADFIEAGIDVTVLIADLHAHLDDEKSPFD---- 84

Query: 93  MMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW-LCSIKYIDLLREIGSFFSVN 151
            +     +     I+G+  +    G    +   +    + L     +++ R         
Sbjct: 85  -LLDARSEYYQVAIEGMIEAA---GADPDEISFVRGTDFQLDEEYTLEMYRMAAETTLAR 140

Query: 152 RMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGID 211
              +   V    + E   +     Y ++Q  D   L  +    +  GG DQ G  +   +
Sbjct: 141 TQRAGSRVVR--ESESP-NLGGLIYPLMQTLDVKALDAD----IAYGGDDQRGIYMLSRE 193

Query: 212 LGERLKTPKLFALTSPLLTTASGTKMGKT-LSGAIWLNKEMT----SPYNFWQYWRNIDD 266
                       + +PLL+  +G +M  +     + LN           + +      +D
Sbjct: 194 TLPDHGHDAPVCIFAPLLSGLTGEEMSASKEDTKVNLNDSHDAVVEKIEDAYCPMGERED 253

Query: 267 ADVVSFAKRLTTLPMSEIDRMAKLQGKE 294
             V+ + + L    + E      ++  +
Sbjct: 254 NGVLEYLEYLVFPVLEERGESFVVERPD 281


>gi|327311627|ref|YP_004338524.1| tyrosyl-tRNA synthetase [Thermoproteus uzoniensis 768-20]
 gi|326948106|gb|AEA13212.1| tyrosyl-tRNA synthetase [Thermoproteus uzoniensis 768-20]
          Length = 326

 Score = 69.5 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 54/272 (19%), Positives = 99/272 (36%), Gaps = 51/272 (18%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            L  R  +  I+   E+          AY+GY+     +H G L  +     L + G + 
Sbjct: 4   DLVTRNAVEVIT-EEEVRSRIGG---RAYVGYEPVWP-VHVGWLIWMFKARDLVEAGFEV 58

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSF---IKYGTGKTDALMLN 127
           + L     + I D               + E+  +I+ + +      K+  G+  A    
Sbjct: 59  LLLEATWHAWINDKGDFAS---------LAEHAARIRELAARISGKFKFKDGRELA---- 105

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
                   KY +L+ ++    S+ R+     +  R + E  L F +  Y  +Q  D   L
Sbjct: 106 -----ADPKYWELVVKVAKSTSLARIRRAIPIMGRRQEEVELDFSKLLYPAMQVADMFYL 160

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT------------ 235
               D  + +GG DQ    +   D+ E+L   K  ++ +P++T+ SG             
Sbjct: 161 ----DVDVALGGLDQRRAHMLARDVAEKLGLKKPASIHTPIVTSLSGVGRMEGTSREIDE 216

Query: 236 -----KMGKTLSG-AIWLNKEMTSPYNFWQYW 261
                KM K+  G AI++     +P    +  
Sbjct: 217 VLALYKMSKSRPGSAIYVT---DTPEEIGKKI 245


>gi|194744520|ref|XP_001954741.1| GF18421 [Drosophila ananassae]
 gi|190627778|gb|EDV43302.1| GF18421 [Drosophila ananassae]
          Length = 431

 Score = 69.1 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 61/337 (18%), Positives = 113/337 (33%), Gaps = 48/337 (14%)

Query: 12  LSERGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           L  RG      +   +  L   G     Y G   ++ SLH GHL   ++  WLQ+T   P
Sbjct: 93  LIRRGMFFSHRDLHTILSLRESGKPFYLYTGRGPSSGSLHVGHLVPFIMTKWLQETFDVP 152

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           + +              D+ + + +  ++++ I+  +      +  G       + NN  
Sbjct: 153 LVI-----------QLTDDEKTLWKDLKVEDAIKLARENAKDIVAMGFDVNKTFIFNNLE 201

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA-------YD 183
           ++     +       +   + + ++F  V+       S    +  +   QA       + 
Sbjct: 202 FMGKCPAM-----YQNIIRIQKCVTFNQVKGIFGFGDSDIIGKIGFPAAQAAPAISSTFP 256

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKL---FALTSPLLTTASGTKMGKT 240
           F+   K  +C +     DQ        D+  RL  PK     +   P L  A  TKM  +
Sbjct: 257 FIFGNKKVNCLIPC-AIDQDPYFRMTRDVAPRLGYPKCALLHSTFFPALQGAK-TKMSAS 314

Query: 241 LSG-AIWLN------KEMTSPYNF---------WQYWRNIDDADV-VSFAKRL--TTLPM 281
               A++L       K   + Y F          +    + D DV     K      + +
Sbjct: 315 DQNSAVYLTDTPKQIKNKINKYAFSGGRATVEEHRKLGGVPDVDVSYQLLKFFLEDDIKL 374

Query: 282 SEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEK 318
            E+ +          E KK+    +T +V   + A K
Sbjct: 375 EEVRQAYSKGEMLTGEIKKLAVETLTPIVEQHQAARK 411


>gi|320101417|ref|YP_004177009.1| tyrosyl-tRNA synthetase [Desulfurococcus mucosus DSM 2162]
 gi|319753769|gb|ADV65527.1| tyrosyl-tRNA synthetase [Desulfurococcus mucosus DSM 2162]
          Length = 361

 Score = 69.1 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 53/248 (21%), Positives = 88/248 (35%), Gaps = 37/248 (14%)

Query: 12  LSERGFIHQISNPRELDILCSQGVV-TAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           L+ R  +  ++   EL  +  +      YIG++ +   +H G L  +  +  L K G   
Sbjct: 9   LAARNTVEVVT-VEELRKVFEEKPRPRGYIGFEPSGL-VHVGWLVWMFKVRDLVKAGVDF 66

Query: 71  ISLMGGGTSIIGDPSFRDES--RRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
             L     + I D    D    R+  R   I  +   +     S +KY   +  A     
Sbjct: 67  HILEATWHAYINDKLGGDMELIRKAARYTRIVLDAIGVP---ESSVKYIDAEELAS---- 119

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
                   +  LLR      S+ R+    ++  R   E    F +  Y ++Q  D   L 
Sbjct: 120 ----DKDYWATLLR-AAKHTSLARVRRALTIMGRRMDEGETDFSKLIYPLMQVTDIFYL- 173

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-------------- 234
              D  + +GG DQ    +   D+ ERL   K  A+ +P++T   G              
Sbjct: 174 ---DLDIALGGMDQRKAHMLTRDIAERLGRRKPVAIHTPIITGLQGPGERMGGGEYDEVA 230

Query: 235 --TKMGKT 240
              KM K+
Sbjct: 231 ASVKMSKS 238


>gi|169838964|ref|ZP_02872152.1| putative tyrosyl-tRNA synthetase 1 [candidate division TM7
           single-cell isolate TM7a]
          Length = 79

 Score = 68.7 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 5/81 (6%)

Query: 86  FRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIG 145
            R + R +  S+ +  N+E +K  + +F        +  ++NN  W   I YID L  IG
Sbjct: 1   GRKQERDLRNSETVNNNVESLKSNYQNF-----QGKNFELVNNYDWFKDINYIDFLYRIG 55

Query: 146 SFFSVNRMLSFESVRSRLKRE 166
              S+ +ML  + V+ R+   
Sbjct: 56  KHVSMTQMLDRDFVQQRIGEG 76


>gi|296242960|ref|YP_003650447.1| tyrosyl-tRNA synthetase [Thermosphaera aggregans DSM 11486]
 gi|296095544|gb|ADG91495.1| tyrosyl-tRNA synthetase [Thermosphaera aggregans DSM 11486]
          Length = 362

 Score = 68.3 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 45/246 (18%), Positives = 86/246 (34%), Gaps = 34/246 (13%)

Query: 25  RELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGD 83
            EL  +  +      Y+G++ +   +H G L  +  +  L + G     L     + I D
Sbjct: 21  EELRKVFEEKEKPRGYLGFEPSGL-VHVGWLVWMFKVRDLVEAGVDFYLLEATWHAYIND 79

Query: 84  PSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLRE 143
                        + I++     + +  +    G  +     ++ E       Y  LL  
Sbjct: 80  KLGG-------SLELIRKAARYTRIVLDAI---GVPEGRVKYVDAEELASDKDYWGLLLR 129

Query: 144 IGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQW 203
                S+ R+    ++  R   E    F +  Y ++Q  D   L  +       GG+DQ 
Sbjct: 130 AAKQVSLARVKRALTIMGRRVDEGETDFSKLIYPLMQVTDIFYLDLDIAV----GGTDQR 185

Query: 204 GNIICGIDLGERLKTPKLFALTSPLLTTASG-----------------TKMGKTLSG-AI 245
              +   D+ E+L   K  A+ +P++T   G                  KM K+    AI
Sbjct: 186 KAHMLTRDIAEKLGLKKPVAIHTPIITGLQGPGGRMGAGAEIDEIAAEAKMSKSKPETAI 245

Query: 246 WLNKEM 251
           ++++E 
Sbjct: 246 FVHEEA 251


>gi|284173388|ref|ZP_06387357.1| tyrosyl-tRNA synthetase [Sulfolobus solfataricus 98/2]
 gi|261601698|gb|ACX91301.1| tyrosyl-tRNA synthetase [Sulfolobus solfataricus 98/2]
          Length = 361

 Score = 67.5 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 40/226 (17%), Positives = 78/226 (34%), Gaps = 17/226 (7%)

Query: 19  HQISNPRELDILCSQ-GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGG 77
            ++    EL         +  YIG++ +    H G L     +  L + G     L    
Sbjct: 15  AEVITIDELRKKLESDEKLKGYIGFEPSGLF-HIGWLIWTQKVKDLVEAGINMTLLRATW 73

Query: 78  TSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKY 137
            + I D    D          + +              YG       +++ +  +    Y
Sbjct: 74  HAWINDKLGGD--------MNLIKMAADYA--VEVIKNYGVDVGKLNIVDADDIVKEKDY 123

Query: 138 IDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQM 197
             L+ ++    S+ R+    ++  R   E  +   +  Y  +Q  D   L    D  + +
Sbjct: 124 WALVIKVAKNASLARIKRALTIMGRRAEEAEIDASKLIYPAMQVSDIFYL----DLDIAL 179

Query: 198 GGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLS 242
           GG+DQ    +   D+ E++   K+ ++ +PLL     G +M  T  
Sbjct: 180 GGTDQRKAHMLARDVAEKMGKKKIVSIHTPLLVGLQGGQRMNITEG 225


>gi|15897044|ref|NP_341649.1| tyrosyl-tRNA synthetase [Sulfolobus solfataricus P2]
 gi|2501078|sp|P95982|SYY_SULSO RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|1707816|emb|CAA69524.1| tyrosyl tRNA synthetase [Sulfolobus solfataricus P2]
 gi|13813211|gb|AAK40439.1| Tyrosyl-tRNA synthetase (tyrS) [Sulfolobus solfataricus P2]
          Length = 366

 Score = 67.5 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 40/226 (17%), Positives = 78/226 (34%), Gaps = 17/226 (7%)

Query: 19  HQISNPRELDILCSQ-GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGG 77
            ++    EL         +  YIG++ +    H G L     +  L + G     L    
Sbjct: 20  AEVITIDELRKKLESDEKLKGYIGFEPSGLF-HIGWLIWTQKVKDLVEAGINMTLLRAAW 78

Query: 78  TSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKY 137
            + I D    D          + +              YG       +++ +  +    Y
Sbjct: 79  HAWINDKLGGD--------MNLIKMAADYA--VEVIKNYGVDVGKLNIVDADDIVKEKDY 128

Query: 138 IDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQM 197
             L+ ++    S+ R+    ++  R   E  +   +  Y  +Q  D   L    D  + +
Sbjct: 129 WALVIKVAKNASLARIKRALTIMGRRAEEAEIDASKLIYPAMQVSDIFYL----DLDIAL 184

Query: 198 GGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLS 242
           GG+DQ    +   D+ E++   K+ ++ +PLL     G +M  T  
Sbjct: 185 GGTDQRKAHMLARDVAEKMGKKKIVSIHTPLLVGLQGGQRMNITEG 230


>gi|93006574|ref|YP_581011.1| tryptophanyl-tRNA synthetase [Psychrobacter cryohalolentis K5]
 gi|92394252|gb|ABE75527.1| tryptophanyl-tRNA synthetase [Psychrobacter cryohalolentis K5]
          Length = 361

 Score = 67.1 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 64/325 (19%), Positives = 113/325 (34%), Gaps = 52/325 (16%)

Query: 19  HQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLT-QLMLLFW-LQKTGHKPISLMG 75
           +QIS+ +  ++   ++ ++T   G   T + LH G+    +      +Q +  +    + 
Sbjct: 4   NQISDSQPTINSSAAKRILT---GIKPTGT-LHLGNYVGAIRPAIQSIQNSDDEAFFFLA 59

Query: 76  GGTSIIG--DPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
               IIG  DP    ES + + +  I   ++  +  F            A +LN      
Sbjct: 60  DYHGIIGCYDPDIIHESTKAIAATWIACGLDPERVTFYRQSDVPEIPELAWILNCSCAKG 119

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDC 193
            +             SV+  +  E V      +Q ++   F Y +L A D +     +  
Sbjct: 120 LMNRAH-----AYKASVDINMEKEDV----DPDQGINMGLFGYPVLMAADILMFNATH-- 168

Query: 194 RLQMGGSDQWGNIICGIDLGERLKT--PKLFALT-------SPLLTTASGTKMGKTLSGA 244
            + +G  DQ  +I    D+          LF L         PLLT   G KM K+ S  
Sbjct: 169 -VPVG-RDQIQHIEMARDIAGTFNHRYKPLFTLPSAVVDDDIPLLTGLDGRKMSKSYSNT 226

Query: 245 IW----LNKEMTSPYNFWQYWRNI-------------DDADVVSFAKRLTTLPMSEIDRM 287
           I     LN ++++     +    I             DD+ +    K       +EI  M
Sbjct: 227 IPLFGDLNPQVSAEKQMHKAIMKIVTNSQLPAEPKDPDDSAIFEIYK--AFATPTEIADM 284

Query: 288 AKLQGKEI--NEAKKIIATEITTMV 310
                  I   +AK+ +  +I   V
Sbjct: 285 RAQFAAGIGWGDAKQALFDKINDEV 309


>gi|19075376|ref|NP_587876.1| cytoplasmic tyrosine-tRNA ligase Yrs1 (predicted)
           [Schizosaccharomyces pombe 972h-]
 gi|3183174|sp|O14055|SYYC_SCHPO RecName: Full=Tyrosyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Tyrosyl--tRNA ligase; Short=TyrRS
 gi|3451306|emb|CAA20443.1| cytoplasmic tyrosine-tRNA ligase Yrs1 (predicted)
           [Schizosaccharomyces pombe]
          Length = 401

 Score = 67.1 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 46/282 (16%), Positives = 98/282 (34%), Gaps = 29/282 (10%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            L  R    ++   + +  + ++  ++ Y G   T    H G+   +M L    K G   
Sbjct: 10  ELITRNL-QEVLGAKMIREILNERDISLYWGSAPTGRP-HCGYFVPMMKLADFLKAGVHV 67

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT---GKTDALMLN 127
             L+    + +      D  +  M  + +Q  +   + I  S +K       K   ++ +
Sbjct: 68  TVLLADVHAFL------DNMKAPM--ELVQHRVRYYEIIVKSILKSLNIPIEKLRFVIGS 119

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           +   L     +D  R   S        +   V  ++            Y  +QA D   L
Sbjct: 120 SYQ-LKEDYTLDNFRLAASTTEHTARRAGAEVVKQVASPL---LSSLIYPGMQALDEQYL 175

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
                  +Q GG DQ    +   ++   L   K   L +P++ + +G KM  + +    +
Sbjct: 176 ----GVDVQFGGVDQRKIFVMAEEVLPVLGYKKRGHLMNPMVPSLAGGKMSSSAAANAKI 231

Query: 248 NKEMTSPYNFWQYWRN-------IDDADVVSFAKRLTTLPMS 282
           +  +  P    +  R+       +++   ++F K ++   M 
Sbjct: 232 D-ILDDPKTVNKKIRSAFCEPGVVEENGCLAFLKYVSFPAME 272


>gi|328781741|ref|XP_001123290.2| PREDICTED: tryptophanyl-tRNA synthetase, cytoplasmic [Apis
           mellifera]
          Length = 373

 Score = 66.8 bits (162), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 55/320 (17%), Positives = 107/320 (33%), Gaps = 44/320 (13%)

Query: 15  RGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +   +  L  QG     Y G   ++ S+H GHL   M   WLQ   H P+ +
Sbjct: 61  RGIFFSHRDMNTILNLYEQGKPFYLYTGRGPSSDSMHLGHLIPFMFCKWLQDVFHVPLVI 120

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                         D+ + + ++ +I++ I+         I  G    +  + +N   + 
Sbjct: 121 -----------QLTDDEKAIWKNIKIEDAIKLSYNNAKDIIALGFKPENTFIFSNLEHIG 169

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA-------YDFVE 186
           +           +   + R ++F  V+       S    + ++   QA       + F+ 
Sbjct: 170 NNPAF-----YQNMIRIQRSVTFNQVKGIFGFGDSDPIGKISFPPTQAAPAISGTFPFIF 224

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTASGTKMGKTLSG 243
                +C +     DQ        D+  ++  PK   L ++  P L  +  TKM  +   
Sbjct: 225 KDAKVNCLIPC-AIDQDPYFRMTRDIAPKIGYPKPALLHSIFFPALQGSK-TKMSASGQA 282

Query: 244 AI------WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT-------TLPMSEIDRMAKL 290
            +        N  +   Y + +++ + DD  +    K  T        L    I+ +  L
Sbjct: 283 TVEEHRQLGGNCNIDIAYQWLRFFLD-DDEKLEQLRKDYTSGEILTGELKKELINVLQPL 341

Query: 291 QGKEINEAKKIIATEITTMV 310
                 EA+  +  E     
Sbjct: 342 IAAH-QEARSKLTDETVKQY 360


>gi|108861908|sp|Q96YV3|SYY_SULTO RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
          Length = 360

 Score = 66.8 bits (162), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 48/239 (20%), Positives = 82/239 (34%), Gaps = 32/239 (13%)

Query: 19  HQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI-SLMGG 76
            +I    EL     +   +  YIG++ +    H G L     L  L   G   +  L+  
Sbjct: 15  AEIVTIDELRKKLEENQKLKGYIGFEPSGLF-HIGWLIWAQKLKDLVDVGVDMMSILVAT 73

Query: 77  GTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIK 136
             + I D    +          + +     +        YG   +   ++  E  +    
Sbjct: 74  WHAWINDKLGGN----------LDKIKLAGQYAIEVLNAYGVDMSKVRIVYAEDLVKDSN 123

Query: 137 YIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQ 196
           Y  L+  I    S+ RM    ++  R   E  L   +  Y  +Q  D   L ++ D  L 
Sbjct: 124 YWALVIRIAKNTSLARMKRALTIMGRKAEEAELDTSKLIYPAMQVAD--ILYQDLDIAL- 180

Query: 197 MGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG---------------TKMGKT 240
            GG+DQ    +   D+ ++L   K+ A+ +PLL    G                KM K+
Sbjct: 181 -GGTDQRKAHMLARDVSDKLGKKKVIAIHTPLLIGLQGGQRMEGVEEDDYLASVKMSKS 238


>gi|110669274|ref|YP_659085.1| tyrosyl-tRNA synthetase [Haloquadratum walsbyi DSM 16790]
 gi|109627021|emb|CAJ53497.1| tyrosine--tRNA ligase [Haloquadratum walsbyi DSM 16790]
          Length = 333

 Score = 66.4 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 50/228 (21%), Positives = 86/228 (37%), Gaps = 28/228 (12%)

Query: 15  RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLM 74
           R     ++N     +  S     AY+GY+ +   LH GH+     L  LQ  G   I L+
Sbjct: 11  RNTAEVVTNEEIHALAESPENRRAYVGYEPSGV-LHVGHMLTANKLIELQSIGFDIIVLL 69

Query: 75  GGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCS 134
               + +   + +          EI+E   +++  F ++           +L +      
Sbjct: 70  ADVHAYL---NGKG------TFAEIRETASQMREQFIAYG--LDSDQTEFILGSSFQFDE 118

Query: 135 IKYIDL--LREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYD 192
              +DL  L    S    NR ++       +K +++ +     Y ++QA D V L    D
Sbjct: 119 EYILDLHALEAETSLARSNRAMAA------IKGDETATVAHAVYPLMQALDIVYL----D 168

Query: 193 CRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPL---LTTASGTKM 237
             L +GG++Q    +   D    +       L +PL   LTT  G KM
Sbjct: 169 VDLAIGGTEQRKVHMLARDTLPSIDADAPACLHTPLIADLTTGIG-KM 215


>gi|297184801|gb|ADI20911.1| tyrosyl-tRNA synthetase [uncultured gamma proteobacterium
           EB080_L93H08]
          Length = 103

 Score = 66.4 bits (161), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 16/93 (17%), Positives = 40/93 (43%), Gaps = 3/93 (3%)

Query: 257 FWQYWRNIDDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEITTMVHGRE 314
            +    ++ D  +  + + L+T  + EI+  ++    G+   + K I+A EI    H  +
Sbjct: 1   MFGKVMSLSDEIMWRYYELLSTKTIDEINTLKLQVKDGENPRDIKFILAMEIVERFHSIK 60

Query: 315 EAEKAATAAMECFDMS-IHSQHMPTISISKDEV 346
           +A  A  + +       +    +  ++IS  ++
Sbjct: 61  QASSAKDSFLNRXSKRKVTXXEIELVTISLKDI 93


>gi|331695770|ref|YP_004332009.1| tryptophanyl-tRNA synthetase [Pseudonocardia dioxanivorans CB1190]
 gi|326950459|gb|AEA24156.1| tryptophanyl-tRNA synthetase [Pseudonocardia dioxanivorans CB1190]
          Length = 346

 Score = 66.0 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 49/307 (15%), Positives = 92/307 (29%), Gaps = 53/307 (17%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN 102
            T   LH GHL   ++    LQ++G + + ++                 ++   +++  +
Sbjct: 33  PTGP-LHLGHLLGTIVERVRLQRSGVEIMVILADY--------------QVTTDRDVAVH 77

Query: 103 IEKIKG--IFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           + +     +          +     +++     +   +  L  +                
Sbjct: 78  LREYVRGAVLDQLAAGLDPQATTFFVHSAVPALNQLLLPFLSLVSEAELHRNPTVR---A 134

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT-- 218
                 ++LS L   Y + QA D +    +    L   G DQ  ++     +  R     
Sbjct: 135 EHELSGRALSGLMLTYPVHQAADILFCKAD----LVPVGKDQLPHVELTRVIARRFAERY 190

Query: 219 PKLFALTSPLLT------TASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDAD---- 268
              F +  P+LT         G KM K+   AI L+          +  R   D +    
Sbjct: 191 GPAFGVPEPMLTDAPDIPGLDGQKMSKSRGNAIGLDSTADETAALIRRAR--TDGERRIT 248

Query: 269 -----------VVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAE 317
                      ++S A   T     EI       G  +    K +ATE          A 
Sbjct: 249 FDPQGRPGVSALLSTAALCTGRAPQEIAEEIGDGGSGLL---KKVATEAVNTFLAPHRAR 305

Query: 318 KAATAAM 324
           +A  AA 
Sbjct: 306 RAELAAE 312


>gi|257077015|ref|ZP_05571376.1| tyrosyl-tRNA synthetase [Ferroplasma acidarmanus fer1]
          Length = 329

 Score = 66.0 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 41/211 (19%), Positives = 76/211 (36%), Gaps = 25/211 (11%)

Query: 38  AYIGYDLTASSL-HAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRS 96
           AYIG++ +   L H   L  +  +  L K G     L+    + + D    D        
Sbjct: 30  AYIGFEPSG--LPHIAILIYVNKINELVKLGFNVKVLLADWHARVNDKLGGD-------- 79

Query: 97  QEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSF 156
               + I K        + Y         +     + +  Y +LL +     S+ R+   
Sbjct: 80  ---IDLIRKSGETLRKSMLYAGLLEGVQFIWATDLVANPDYWELLLQTAKNSSLLRIRRS 136

Query: 157 ESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL 216
             +  R + +    F ++ Y ++Q  D   L  +    + +GG+DQ    +   D+ E++
Sbjct: 137 LPIMGRTEEDADKDFSKYIYPLMQVTDVFYLNSD----IAIGGTDQRHAYMLARDIAEKM 192

Query: 217 KTPKLFALTSPLLTTASG-------TKMGKT 240
              K   L  PL+ +  G        KM K+
Sbjct: 193 GRKKPILLEMPLIASLKGKGRMDDFKKMSKS 223


>gi|555684|gb|AAA85643.1| putative tyrosyl-tRNA synthetase [Mycobacterium smegmatis str. MC2
           155]
          Length = 57

 Score = 65.6 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 11/48 (22%), Positives = 23/48 (47%)

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           ARR +    + +NN+ + +++   +  DF   G + L  GK++     
Sbjct: 1   ARRTVAEGGVYVNNARVESDEWVPQESDFLHEGWLVLRRGKRHIAGVR 48


>gi|283852402|ref|ZP_06369672.1| tryptophanyl-tRNA synthetase [Desulfovibrio sp. FW1012B]
 gi|283572250|gb|EFC20240.1| tryptophanyl-tRNA synthetase [Desulfovibrio sp. FW1012B]
          Length = 335

 Score = 64.8 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 47/301 (15%), Positives = 88/301 (29%), Gaps = 58/301 (19%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGG---TSIIGDPSFRDESRRMMRSQ 97
           G   T   LH GH   ++  +   +  H+    +      T+   DP         +   
Sbjct: 15  GMRPTGP-LHLGHYFGVLKNWINLQETHQCYFFVADWHALTTEYADPRRIKGFVPELVKD 73

Query: 98  EIQENIE---KIKGIFSSFIKYGTGKTDALMLNNETWLCS-IKYIDLLREIGSFFSVNRM 153
            +   ++    +    S   ++        ML   +WL     Y D L E+ +       
Sbjct: 74  WVAGGLDPEKCVIFQQSQVKEHAELHLLLSMLTPVSWLERCPTYKDQLTELAAKDLTTYG 133

Query: 154 LSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLG 213
                                 Y +L A D + L K+    +   G DQ  ++    ++ 
Sbjct: 134 F-------------------LGYPVLMASDIL-LYKSGFVPV---GQDQLPHLELTREIA 170

Query: 214 ERLKT-------PKLFALTSPL-LTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWR--- 262
            R               LT    L    G KM K+   AI L+++   P    +      
Sbjct: 171 RRANHLYGNFFPEPQALLTPDAKLAGLDGRKMSKSYGNAIGLSED---PATMKKKVMGML 227

Query: 263 ------NIDDA------DVVSFAKRLTT-LPMSEIDRMAKLQGKEINEAKKIIATEITTM 309
                  + D       ++  + + LT    + EI            + KK++   +   
Sbjct: 228 TCAKRARLADPGDPKECNLFPYHELLTDPARLPEIVEGCTTATWGCGDCKKLLVESMNAF 287

Query: 310 V 310
           +
Sbjct: 288 L 288


>gi|74577141|sp|Q9YA64|SYY_AERPE RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|83754903|pdb|2CYA|A Chain A, Crystal Structure Of Tyrosyl-Trna Synthetase From
           Aeropyrum Pernix
          Length = 364

 Score = 64.8 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 43/244 (17%), Positives = 85/244 (34%), Gaps = 32/244 (13%)

Query: 14  ERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
            R  +  ++      +L S   +  YIGY+ +  + H G L  +  +  L + G     L
Sbjct: 14  ARNTVEIVTEEELKGLLASGARIKGYIGYEPSGVA-HIGWLVWMYKVKDLVEAGVDFSVL 72

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                + I D    D          I+     ++ +  +    G        ++ E    
Sbjct: 73  EATWHAYINDKLGGD-------MDLIRAAARIVRRVMEAA---GVPVERVRFVDAEELAS 122

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDC 193
              Y  L+  +    S+ R+    ++  R   E  +   +  Y ++Q  D   +    D 
Sbjct: 123 DKDYWGLVIRVAKRASLARVRRALTIMGRRAEEAEVDASKLIYPLMQVSDIFYM----DL 178

Query: 194 RLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-----------------TK 236
            + +GG DQ    +   D+ E+L   K  A+ +P++++  G                  K
Sbjct: 179 DIALGGMDQRKAHMLARDVAEKLGRKKPVAIHTPIISSLQGPGRMEASQGEIDDVLAEVK 238

Query: 237 MGKT 240
           M K+
Sbjct: 239 MSKS 242


>gi|118431719|ref|NP_148365.2| tyrosyl-tRNA synthetase [Aeropyrum pernix K1]
 gi|116063041|dbj|BAA81085.2| tyrosyl-tRNA synthetase [Aeropyrum pernix K1]
          Length = 361

 Score = 64.8 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 43/244 (17%), Positives = 85/244 (34%), Gaps = 32/244 (13%)

Query: 14  ERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
            R  +  ++      +L S   +  YIGY+ +  + H G L  +  +  L + G     L
Sbjct: 11  ARNTVEIVTEEELKGLLASGARIKGYIGYEPSGVA-HIGWLVWMYKVKDLVEAGVDFSVL 69

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                + I D    D          I+     ++ +  +    G        ++ E    
Sbjct: 70  EATWHAYINDKLGGD-------MDLIRAAARIVRRVMEAA---GVPVERVRFVDAEELAS 119

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDC 193
              Y  L+  +    S+ R+    ++  R   E  +   +  Y ++Q  D   +    D 
Sbjct: 120 DKDYWGLVIRVAKRASLARVRRALTIMGRRAEEAEVDASKLIYPLMQVSDIFYM----DL 175

Query: 194 RLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-----------------TK 236
            + +GG DQ    +   D+ E+L   K  A+ +P++++  G                  K
Sbjct: 176 DIALGGMDQRKAHMLARDVAEKLGRKKPVAIHTPIISSLQGPGRMEASQGEIDDVLAEVK 235

Query: 237 MGKT 240
           M K+
Sbjct: 236 MSKS 239


>gi|48477298|ref|YP_023004.1| tyrosyl-tRNA synthetase [Picrophilus torridus DSM 9790]
 gi|74568194|sp|Q6L2J1|SYY_PICTO RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|48429946|gb|AAT42811.1| tyrosyl-tRNA synthetase [Picrophilus torridus DSM 9790]
          Length = 329

 Score = 64.5 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 41/230 (17%), Positives = 81/230 (35%), Gaps = 26/230 (11%)

Query: 21  ISNPRELDILCSQGVVTAYIGYDLTASSLHAGH-LTQLMLLFWLQKTGHKPISLMGGGTS 79
           ++       L +      YIG++ + +  H G  L     +  +   G K   L+    +
Sbjct: 15  VTMDEAFKALNNNPK--GYIGFEPSGNP-HLGTCLLLANKINDMVNAGIKMTVLLADWHA 71

Query: 80  IIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYID 139
           ++ D   +               I K   +F          ++   +     +    Y  
Sbjct: 72  MVND---KLNGD--------LNEIRKSGELFKRAWLAAGLNSNVKFVWASELVEKSDYWS 120

Query: 140 LLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGG 199
           LL ++    S+ R+     +  R + +    F ++ Y ++Q  D   L    D    +GG
Sbjct: 121 LLLKVAKNASLLRIRRSLPIMGRSEEDADRDFSKYIYPLMQVTDIFYL----DVDFALGG 176

Query: 200 SDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-------TKMGKTLS 242
            DQ    +   D+ ER+   K  ++ +PLL++  G        KM K+  
Sbjct: 177 MDQRHAHMLARDIAERMNIKKPVSVHTPLLSSLKGSGRMDSFKKMSKSEP 226


>gi|77918202|ref|YP_356017.1| tryptophanyl-tRNA synthetase [Pelobacter carbinolicus DSM 2380]
 gi|77544285|gb|ABA87847.1| tryptophanyl-tRNA synthetase [Pelobacter carbinolicus DSM 2380]
          Length = 321

 Score = 64.5 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 41/292 (14%), Positives = 81/292 (27%), Gaps = 45/292 (15%)

Query: 41  GYDLTASSLHAGHLTQLML-LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           G   +  SLH G+   +M  +   Q+  H+    +    ++      +      +    +
Sbjct: 6   GIQPSG-SLHLGNYFGMMKKMVDYQEH-HELFCFIANYHAMTSVTDGKA-----LAKGTL 58

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETW-LCSIKYIDLLREIGSFFSVNRMLSFES 158
           +     +             ++D   +   TW L +   + LL    S+         + 
Sbjct: 59  EAAANFLALGLDPEKSVFWVQSDVPEVQELTWALSNFTPMGLLERCHSY--------KDK 110

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
           V   +     L    F Y +L A D +     +   L   G DQ  ++    D+  +   
Sbjct: 111 VAKGIAPNHGL----FAYPVLMAADILL----FGGELVPVGKDQKQHLEVARDIAIKFNN 162

Query: 219 PKLFALTSP---------LLTTASGTKMGKTLSGAI--WLNKEMTSPYNFWQYWRNIDDA 267
                +  P          +    G KM K+    I  +L+ +                 
Sbjct: 163 QYGDVMVIPEPDIDDELATIPGLDGQKMSKSYKNTIDLFLDDKALRKQVMRIVTDPTPVE 222

Query: 268 D--------VVSFAKRLTTLPMSEIDRMAKLQGK-EINEAKKIIATEITTMV 310
           D        V    +        +  R   L G     E K+ +   +    
Sbjct: 223 DPKNPDTCNVFQIYRLFLDKQQEQALRQRYLAGGLGYGEVKQELFETVRDFF 274


>gi|289811391|ref|ZP_06542020.1| tyrosyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. AG3]
          Length = 46

 Score = 64.1 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 26/46 (56%), Positives = 30/46 (65%)

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPL 228
           DF  L K +   LQ+GGSDQWGNI  GIDL  RL   ++F LT PL
Sbjct: 1   DFACLNKLHGVALQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPL 46


>gi|303246566|ref|ZP_07332844.1| tryptophanyl-tRNA synthetase [Desulfovibrio fructosovorans JJ]
 gi|302491906|gb|EFL51784.1| tryptophanyl-tRNA synthetase [Desulfovibrio fructosovorans JJ]
          Length = 335

 Score = 64.1 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 42/312 (13%), Positives = 93/312 (29%), Gaps = 62/312 (19%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTS-IIGDPSFRDESRRMMRSQEI 99
           G   T   LH GH   ++  +   +  H+    +    +      + +     +   + +
Sbjct: 15  GMRPTGP-LHLGHYFGVLKNWVALQDTHECFFFVADWHALTTEYATPKRIKGFV--PELV 71

Query: 100 QENI-------EKIKGIFSSFIKYGTGKTDALMLNNETWLC-SIKYIDLLREIGSFFSVN 151
           ++ +       + +    S   ++        M+   +WL  +  Y D L E+ +     
Sbjct: 72  KDWVAAGLDPEKCVLFQQSQIKEHAELHLLLSMVTPVSWLERNPTYKDQLTELAAKDLAT 131

Query: 152 RMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGID 211
                                   Y +L A D + + +     +   G DQ  ++    +
Sbjct: 132 YGF-------------------LGYPVLMASDIL-IYRPGFVPV---GQDQLPHMELTRE 168

Query: 212 LGERLKT-------PKLFALTSPL-LTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
           +  R               LT    L    G KM K+   +I L ++   P    +   +
Sbjct: 169 IARRANHLYGNFFPEPQALLTPDAKLAGLDGRKMSKSYGNSIGLAED---PGTMKKKVMS 225

Query: 264 I---------DDA------DVVSFAKRLTTLP-MSEIDRMAKLQGKEINEAKKIIATEIT 307
           +          D       ++  + + LT    + EI            + KK++   + 
Sbjct: 226 MLTCEKRARLTDPGDPKECNLYPYHELLTDQTRLPEIVEGCTHATWGCGDCKKLLVESMA 285

Query: 308 TMVHGREEAEKA 319
             +    +  KA
Sbjct: 286 AFLEPIRDRRKA 297


>gi|149194990|ref|ZP_01872083.1| tryptophanyl-tRNA synthetase [Caminibacter mediatlanticus TB-2]
 gi|149134911|gb|EDM23394.1| tryptophanyl-tRNA synthetase [Caminibacter mediatlanticus TB-2]
          Length = 322

 Score = 64.1 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 50/296 (16%), Positives = 90/296 (30%), Gaps = 47/296 (15%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   T   LH GH   ++  +   +  ++ +  +    ++           + +  + I+
Sbjct: 6   GMRPTGK-LHLGHYIGVIKNWKNLQDNYQCMFFVADWHALSTKYDEGLNL-KELSIELIK 63

Query: 101 ENIEK-IKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           E I   I    ++       K  A +            I  +  +    +    ++    
Sbjct: 64  EWIACGIDPQKATLFIQSAIKEHAEL------YLIFNMITPISWLERNPTYKDAMNQPEY 117

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-- 217
           +   K           Y +LQ  D V     YD  L   G DQ  ++    ++       
Sbjct: 118 KK--KNNAGF----LTYPVLQTADIVI----YDADLVPIGEDQKPHLELAREIVRHFHYI 167

Query: 218 ------TPKLFALTSPL-LTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWR-------N 263
                       LT    L    G KM K+ + AI+L++        WQ  R        
Sbjct: 168 YKMEIFKEPKEILTEVARLPGLDGRKMSKSYNNAIYLDETSD---EIWQKVRMAKTDPAR 224

Query: 264 IDDAD--------VVSFAKRLTTL-PMSEIDRMAKLQGKEINEAKKIIATEITTMV 310
           I   D        V  + K  ++   + EI+   K       E KK  A  I  ++
Sbjct: 225 IKKTDPGHPEVCIVFDYHKAFSSKEEVKEIEEACKNGTIGCVECKKRCAKNIEKII 280


>gi|169836597|ref|ZP_02869785.1| tyrosyl-tRNA synthetase [candidate division TM7 single-cell isolate
           TM7a]
          Length = 42

 Score = 64.1 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 19/42 (45%), Positives = 27/42 (64%)

Query: 219 PKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQY 260
               A+T  LL  + G KMGKT+ GA+WL+   T+P+ F+QY
Sbjct: 1   KDTHAMTITLLLNSEGKKMGKTVGGAVWLDPNKTTPFEFYQY 42


>gi|195112475|ref|XP_002000798.1| GI22326 [Drosophila mojavensis]
 gi|193917392|gb|EDW16259.1| GI22326 [Drosophila mojavensis]
          Length = 432

 Score = 63.3 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 67/337 (19%), Positives = 110/337 (32%), Gaps = 48/337 (14%)

Query: 12  LSERGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           L  RG      +   +  L  QG     Y G   ++ SLH GHL   +L  WLQ+T   P
Sbjct: 94  LIRRGIFFSHRDLHSILTLIEQGKPFYLYTGRGPSSGSLHVGHLVPFILTKWLQETFDVP 153

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           + +              D+ + + +  +I+E I   +      +  G       + NN  
Sbjct: 154 LII-----------QLTDDEKTLWKDLKIEEAIRLARENAKDIVAMGFDLNKTFIFNNLE 202

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA-------YD 183
           ++         + I     + + ++F  V+       S    +  +   QA       + 
Sbjct: 203 FMGK--CPAFYQNI---IRIQKCVTFNQVKGIFGFGDSDIIGKIGFPAAQAAPALSSTFP 257

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKL---FALTSPLLTTASGTKMGKT 240
           F+   K   C +     DQ        D+  RL  PK     +   P L  A  TKM  +
Sbjct: 258 FIFGNKKVHCLIPC-AIDQDPYFRMTRDVAPRLGFPKCALIHSSFFPALQGAK-TKMSAS 315

Query: 241 LSG-AIWLN------KEMTSPYNF---------WQYWRNIDDADV-VSFAKRL--TTLPM 281
               A++L       K   + Y F          +    I D DV     K        +
Sbjct: 316 EQNSAVFLTDTPKQIKNKINKYAFSGGRTTVEEHRQLGGIPDIDVAYQLLKFFLEDDKKL 375

Query: 282 SEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEK 318
            E+            E KK+    +T +V   + A K
Sbjct: 376 EEVRLAYSKGEMLTGEIKKLAVETLTPIVEQHQAARK 412


>gi|325289972|ref|YP_004266153.1| tryptophanyl-tRNA synthetase [Syntrophobotulus glycolicus DSM 8271]
 gi|324965373|gb|ADY56152.1| tryptophanyl-tRNA synthetase [Syntrophobotulus glycolicus DSM 8271]
          Length = 322

 Score = 62.9 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 40/220 (18%), Positives = 74/220 (33%), Gaps = 26/220 (11%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   T  SLH GHL+ +     LQ   +     +    ++      + + + ++R   + 
Sbjct: 8   GMRPTG-SLHIGHLSVIQNWVRLQDE-YNCFFTIVDWHALTTGYQDKLDMKNLIREIAVD 65

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
                +  + S+       K  A +    +    + +++                 + + 
Sbjct: 66  WLSVGLDPVKSAIFVQSHVKEHAELHLLFSMFTPLSWLE-----------RVPTYKDQIN 114

Query: 161 SRLKREQSLSFLEFN-YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-- 217
              +  + L    F  Y +LQA D + L K     +   G DQ  +I    ++G R    
Sbjct: 115 QLAEDGKDLHTYGFLGYPLLQAADIL-LYKADAVPV---GEDQIPHIELCREVGRRFNHL 170

Query: 218 ------TPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
                  P+      PLL    G KM K+ + AI L    
Sbjct: 171 YGKLFPEPQALIGKIPLLPGVDGRKMSKSYNNAISLTASP 210


>gi|71066123|ref|YP_264850.1| tryptophanyl-tRNA synthetase [Psychrobacter arcticus 273-4]
 gi|71039108|gb|AAZ19416.1| tryptophanyl-tRNA synthetase [Psychrobacter arcticus 273-4]
          Length = 362

 Score = 62.9 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 54/292 (18%), Positives = 97/292 (33%), Gaps = 44/292 (15%)

Query: 41  GYDLTASSLHAGHLTQLM--LLFWLQKTGHKPISLMGGGTSIIG--DPSFRDESRRMMRS 96
           G   T + LH G+    +   +  ++ +  +    +     IIG  DP+   ES + + +
Sbjct: 25  GIKPTGT-LHLGNYVGAIRPAIESIKNSDDEAFFFLADYHGIIGCYDPAIIHESTKAIAA 83

Query: 97  QEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSF 156
             I   ++  +  F            A +LN       +             SV+  +  
Sbjct: 84  TWIACGLDPERVTFYRQSDVPEILELAWILNCSCAKGLMNRAH-----AYKASVDINMEK 138

Query: 157 ESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL 216
           E+V      +Q ++   F Y +L A D +     +   + +G  DQ  +I    D+    
Sbjct: 139 ENV----DPDQGINMGLFGYPVLMAADILMFNATH---VPVG-RDQIQHIEMARDIAGTF 190

Query: 217 KTPKLFALTSP---------LLTTASGTKMGKTLSGAIWL----NKEMTSPYNFWQYWRN 263
                   T P         LLT   G KM K+ S  I L    N +++      +    
Sbjct: 191 NHRYKTLFTLPSAVVDDDIPLLTGLDGRKMSKSYSNTIPLFGEINPQVSGEKQMHKAIMK 250

Query: 264 I----------DDADVVSFAKRL-TTLPMSEIDRMAKLQGKEI--NEAKKII 302
           I           D+D  +  +         EI  M +     I   +AK+ +
Sbjct: 251 IVTNSQLPAEPKDSDDSAIFEIYKAFATPEEIVDMRRQFAAGIGWGDAKQAL 302


>gi|15791055|ref|NP_280879.1| tyrosyl-tRNA synthetase [Halobacterium sp. NRC-1]
 gi|169236805|ref|YP_001690005.1| tyrosyl-tRNA synthetase [Halobacterium salinarum R1]
 gi|74576519|sp|Q9HN62|SYY_HALSA RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|254783609|sp|B0R7E0|SYY_HALS3 RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|10581650|gb|AAG20359.1| tyrosyl-tRNA synthetase [Halobacterium sp. NRC-1]
 gi|167727871|emb|CAP14659.1| tyrosine--tRNA ligase [Halobacterium salinarum R1]
          Length = 327

 Score = 62.5 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 42/213 (19%), Positives = 76/213 (35%), Gaps = 26/213 (12%)

Query: 37  TAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRS 96
             Y+GY+ +   LH GHL     L  LQ  G + + L+    + + D             
Sbjct: 31  RVYVGYEPSGV-LHLGHLLTANKLMDLQDAGMEVVVLLADVHAYLNDKGSF--------- 80

Query: 97  QEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSF 156
           +EI+   +++K  F ++           +L +   L     +DL         V   L  
Sbjct: 81  EEIRATADQMKAQFLAYG--LDEDQTEFVLGSSFQLDEDYELDL-----HAMQVETSLKR 133

Query: 157 -ESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER 215
            +   + ++  ++       Y ++QA D   L    D  L +GG DQ    +   +    
Sbjct: 134 AQRAMAEIQSGETPKVSHVVYPLMQALDIEYL----DLDLAIGGMDQRKVHMLAREELPS 189

Query: 216 LKTPKLFALTSPLLTT---ASGTKMGKTLSGAI 245
           +   K   L +P++       G KM  +    I
Sbjct: 190 VGYEKRPVLHTPIIGDLGSGDG-KMSSSEGVTI 221


>gi|251773464|gb|EES54012.1| Tryptophanyl-tRNA synthetase [Leptospirillum ferrodiazotrophum]
          Length = 334

 Score = 61.8 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 45/294 (15%), Positives = 99/294 (33%), Gaps = 44/294 (14%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   +   LH G+    +  + L +  H     +    ++                ++  
Sbjct: 15  GIQPSGR-LHLGNYMGALRNWTLLQERHDCFFFIADWHAL------------STNYEKTD 61

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
                ++ +   F+  G      ++           + +L   +G    V  +L   + +
Sbjct: 62  ALRGNVRELLLDFLSAGLDPEKCVLFQQSH---VKAHAELYLLLGMMTPVAWLLRNPTYK 118

Query: 161 SRLK--REQSLSFLEFN-YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK 217
            ++     + L+   F  Y +LQ  D + L +     +   G DQ  ++    ++  R  
Sbjct: 119 DQMAQIENRDLAQYGFLGYPVLQTAD-IVLYRPTHVPV---GQDQIPHLELAREIVRRFH 174

Query: 218 T--PKLFALTSPLLT------TASGTKMGKTLSGAIWLNKEMTSPYNFWQYWR------N 263
           +   ++F    PLLT         G KM K+   A++L+    + +  ++          
Sbjct: 175 SLYGEVFPEPLPLLTETPKLPGLDGRKMSKSYDNAVFLSDTKEAVWEKFRTMVTDTQRKR 234

Query: 264 IDDAD------VVSFAKRLTTL-PMSEIDRMAKLQGKEINEAKKIIATEITTMV 310
             D        V S  +  T    ++ IDR  +       + KKI+  E+  ++
Sbjct: 235 RSDPGRPEVCPVFSLHQIFTPKETVATIDRECRTAAIGCIDCKKILTGEVEAIL 288


>gi|125772496|ref|XP_001357561.1| GA21996 [Drosophila pseudoobscura pseudoobscura]
 gi|195158992|ref|XP_002020367.1| GL13546 [Drosophila persimilis]
 gi|54637293|gb|EAL26695.1| GA21996 [Drosophila pseudoobscura pseudoobscura]
 gi|194117136|gb|EDW39179.1| GL13546 [Drosophila persimilis]
          Length = 431

 Score = 61.4 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 62/337 (18%), Positives = 111/337 (32%), Gaps = 48/337 (14%)

Query: 12  LSERGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           L  RG      +   +  L  QG     Y G   ++ SLH GHL   M+  WLQ+T   P
Sbjct: 93  LIRRGMFFSHRDLHTILTLKEQGKPFYLYTGRGPSSGSLHVGHLIPFMMTKWLQETFDVP 152

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           + +              D+ + + +  ++++ I+  +      +  G       + NN  
Sbjct: 153 LVI-----------QLTDDEKTLWKDLKVEDAIKLARENAKDIVAMGFDVNKTFIFNNLE 201

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA-------YD 183
           ++     +       +   + + ++F  V+       S    +  +   QA       + 
Sbjct: 202 FMGKCPAM-----YQNIIRIQKCVTFNQVKGIFGFGDSDIIGKIGFPAAQAAPAISSTFP 256

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKL---FALTSPLLTTASGTKMGKT 240
           F+   K   C +     DQ        D+  RL  PK     +   P L  A  TKM  +
Sbjct: 257 FLFGNKKVHCLIPC-AIDQDPYFRMTRDVAPRLGFPKCALIHSTFFPALQGAK-TKMSAS 314

Query: 241 LSG-AIWLN------KEMTSPYNF---------WQYWRNIDDADV-VSFAKRL--TTLPM 281
               A++L       K   + Y F          +    + + DV     K        +
Sbjct: 315 DQNSAVYLTDTPKQIKNKINKYAFSGGRTTVEEHRELGGVPEIDVSYQLLKFFLEDDAKL 374

Query: 282 SEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEK 318
            E+            E KK+    +T +V   + A K
Sbjct: 375 EEVRVAYSKGEMLTGEIKKLAVETLTPIVEQHQAARK 411


>gi|6636388|gb|AAF20167.1|AF125157_1 tryptophanyl-tRNA synthetase [Drosophila melanogaster]
          Length = 420

 Score = 61.4 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 59/334 (17%), Positives = 110/334 (32%), Gaps = 48/334 (14%)

Query: 15  RGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +   +  L  QG     Y G   ++ SLH GHL   ++  WLQ+T   P+ +
Sbjct: 85  RGMFFSHRDLHTILTLREQGKPFYLYTGRGPSSGSLHVGHLVPFIMTKWLQETFDVPLVI 144

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                         D+ + + +  ++++ I+  +      +  G       + NN  ++ 
Sbjct: 145 -----------QLTDDEKTLWKDLKVEDAIKLGRENAKDIVAIGFDVNKTFIFNNLEFVG 193

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA-------YDFVE 186
               +       +   + + ++F  V+       S    +  +   QA       + F+ 
Sbjct: 194 KCPAM-----YQNIIRIQKCVTFNQVKGIFGFGDSDIIGKIGFPAAQAAPAISSTFPFIF 248

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKL---FALTSPLLTTASGTKMGKTLSG 243
             +   C +     DQ        D+  RL  PK     +   P L  A  TKM  +   
Sbjct: 249 GNRKVHCLIPC-AIDQDPYFRMTRDVAPRLGFPKCALIHSTFFPALQGAK-TKMSASDQN 306

Query: 244 -AIWLN------KEMTSPYNF---------WQYWRNIDDADV-VSFAKRL--TTLPMSEI 284
            A++L       K   + Y F          +    + + DV     K        + E+
Sbjct: 307 SAVYLTDTPKQIKNKINKYAFSGGRVTVEEHRKLGGVPEVDVSYQLLKFFLEDDAKLEEV 366

Query: 285 DRMAKLQGKEINEAKKIIATEITTMVHGREEAEK 318
                       E KK+    +T +V   + A K
Sbjct: 367 RVAYSKGEMLTGEIKKLAVETLTPIVEQHQAARK 400


>gi|152991113|ref|YP_001356835.1| tryptophanyl-tRNA synthetase [Nitratiruptor sp. SB155-2]
 gi|151422974|dbj|BAF70478.1| tryptophanyl-tRNA synthetase [Nitratiruptor sp. SB155-2]
          Length = 330

 Score = 61.0 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 39/234 (16%), Positives = 77/234 (32%), Gaps = 35/234 (14%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   T   LH GH   ++  +   +  H+    +    ++      +   +  +  + ++
Sbjct: 6   GMRPTGK-LHLGHYLGVLKNWVNLQEEHECFFFVADWHALSTSYEDKLNLKN-LSIELVR 63

Query: 101 EN-IEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLL-REIGSFFSVNRMLSFES 158
           +     I    S+       K  A +      L  I  +  L R       + ++ + + 
Sbjct: 64  DWIAAGIDPQKSTIFIQSAIKEHAEL---YVLLNMITPLGWLERNPTYKDQLAQIKNKD- 119

Query: 159 VRSRLKREQSLSFLEFN-YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK 217
                     +    F  Y +LQ  D + L       +   G DQ  ++    ++  R  
Sbjct: 120 ----------IHTAGFLTYPVLQTAD-IVLYDAQAVPI---GEDQRPHLEIAREIVRRFH 165

Query: 218 ---------TPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWR 262
                     PK     +P L    G KM K+ + AI+L+    +P   W+  R
Sbjct: 166 HLFGCEVFTEPKELLSPTPRLLGLDGRKMSKSYNNAIYLS---DTPEEVWKKLR 216


>gi|313683273|ref|YP_004061011.1| tryptophanyl-tRNA synthetase [Sulfuricurvum kujiense DSM 16994]
 gi|313156133|gb|ADR34811.1| tryptophanyl-tRNA synthetase [Sulfuricurvum kujiense DSM 16994]
          Length = 321

 Score = 61.0 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 34/215 (15%), Positives = 63/215 (29%), Gaps = 32/215 (14%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   +   LH G+    +      +  H+  + +    ++         SR  M++    
Sbjct: 6   GIQPSGD-LHIGNYFGSIKAMIESQNDHEVFAFIANYHAMSSLSDGERLSRLTMQAAT-D 63

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETW-LCSIKYIDLLREIGSFFSVNRMLSFESV 159
                +    S+F      K    +     W L     + LL    S+         + V
Sbjct: 64  FLALGMDPQKSTFWVQSDVKEVLELY----WVLSGFTPMGLLERAHSY--------KDKV 111

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
              +    SL    F+Y +L A D +     +   +   G DQ  ++    D+  +    
Sbjct: 112 AKGIASNHSL----FSYPVLMAADILL----FGSEVIPVGKDQIQHVEIARDIAVKFNNQ 163

Query: 220 KLFALTSP---------LLTTASGTKMGKTLSGAI 245
                  P          +    G KM K+    I
Sbjct: 164 YGDLFVLPEFRVDENVATVPGIDGQKMSKSYGNTI 198


>gi|17864462|ref|NP_524826.1| Tryptophanyl-tRNA synthetase, isoform B [Drosophila melanogaster]
 gi|24645295|ref|NP_731327.1| Tryptophanyl-tRNA synthetase, isoform A [Drosophila melanogaster]
 gi|7299154|gb|AAF54352.1| Tryptophanyl-tRNA synthetase, isoform B [Drosophila melanogaster]
 gi|10726403|gb|AAG22136.1| Tryptophanyl-tRNA synthetase, isoform A [Drosophila melanogaster]
 gi|201065817|gb|ACH92318.1| FI06027p [Drosophila melanogaster]
          Length = 430

 Score = 61.0 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 59/334 (17%), Positives = 110/334 (32%), Gaps = 48/334 (14%)

Query: 15  RGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +   +  L  QG     Y G   ++ SLH GHL   ++  WLQ+T   P+ +
Sbjct: 95  RGMFFSHRDLHTILTLREQGKPFYLYTGRGPSSGSLHVGHLVPFIMTKWLQETFDVPLVI 154

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                         D+ + + +  ++++ I+  +      +  G       + NN  ++ 
Sbjct: 155 -----------QLTDDEKTLWKDLKVEDAIKLGRENAKDIVAIGFDVNKTFIFNNLEFVG 203

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA-------YDFVE 186
               +       +   + + ++F  V+       S    +  +   QA       + F+ 
Sbjct: 204 KCPAM-----YQNIIRIQKCVTFNQVKGIFGFGDSDIIGKIGFPAAQAAPAISSTFPFIF 258

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKL---FALTSPLLTTASGTKMGKTLSG 243
             +   C +     DQ        D+  RL  PK     +   P L  A  TKM  +   
Sbjct: 259 GNRKVHCLIPC-AIDQDPYFRMTRDVAPRLGFPKCALIHSTFFPALQGAK-TKMSASDQN 316

Query: 244 -AIWLN------KEMTSPYNF---------WQYWRNIDDADV-VSFAKRL--TTLPMSEI 284
            A++L       K   + Y F          +    + + DV     K        + E+
Sbjct: 317 SAVYLTDTPKQIKNKINKYAFSGGRVSVEEHRKLGGVPEVDVSYQLLKFFLEDDAKLEEV 376

Query: 285 DRMAKLQGKEINEAKKIIATEITTMVHGREEAEK 318
                       E KK+    +T +V   + A K
Sbjct: 377 RVAYSKGEMLTGEIKKLAVETLTPIVEQHQAARK 410


>gi|6636386|gb|AAF20166.1|AF125156_1 tryptophanyl-tRNA synthetase [Drosophila melanogaster]
 gi|18447050|gb|AAL68116.1| AT21437p [Drosophila melanogaster]
          Length = 430

 Score = 60.6 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 59/334 (17%), Positives = 110/334 (32%), Gaps = 48/334 (14%)

Query: 15  RGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +   +  L  QG     Y G   ++ SLH GHL   ++  WLQ+T   P+ +
Sbjct: 95  RGMFFSHRDLHTILTLREQGKPFYLYTGRGPSSGSLHVGHLVPFIMTKWLQETFDVPLVI 154

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                         D+ + + +  ++++ I+  +      +  G       + NN  ++ 
Sbjct: 155 -----------QLTDDEKTLWKDLKVEDAIKLGRENAKDIVAIGFDVNKTFIFNNLEFVG 203

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA-------YDFVE 186
               +       +   + + ++F  V+       S    +  +   QA       + F+ 
Sbjct: 204 KCPAM-----YQNIIRIQKCVTFNQVKGIFGFGDSDIIGKIGFPAAQAAPAISSTFPFIF 258

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKL---FALTSPLLTTASGTKMGKTLSG 243
             +   C +     DQ        D+  RL  PK     +   P L  A  TKM  +   
Sbjct: 259 GNRKVHCLIPC-AIDQDPYFRMTRDVAPRLGFPKCALIHSTFFPALQGAK-TKMSASDQN 316

Query: 244 -AIWLN------KEMTSPYNF---------WQYWRNIDDADV-VSFAKRL--TTLPMSEI 284
            A++L       K   + Y F          +    + + DV     K        + E+
Sbjct: 317 SAVYLTDTPKQIKNKINKYAFSGGRVTVEEHRKLGGVPEVDVSYQLLKFFLEDDAKLEEV 376

Query: 285 DRMAKLQGKEINEAKKIIATEITTMVHGREEAEK 318
                       E KK+    +T +V   + A K
Sbjct: 377 RVAYSKGEMLTGEIKKLAVETLTPIVEQHQAARK 410


>gi|163784163|ref|ZP_02179101.1| tryptophanyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
 gi|159880571|gb|EDP74137.1| tryptophanyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
          Length = 377

 Score = 60.6 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 49/235 (20%), Positives = 84/235 (35%), Gaps = 29/235 (12%)

Query: 139 DLLREIGSFFSVNRMLSFESVRS--RLKREQSLSFLEFN-YMILQAYDFVELAKNYDCRL 195
             L+E+   F +N+ +  E+V +  R    + +  L F  Y +LQA D + + K     +
Sbjct: 137 GYLKEVLIKFGINKKIVEEAVNNLERGDVGKDIDTLGFLAYPVLQAADIL-IYKAQGVPV 195

Query: 196 QMGGSDQWGNIICGIDLGERLKT-------PKLFALTSPL-LTTASGTKMGKTLSGAIWL 247
              G DQ  +I    ++  R               LT    L    G KM K+ + AI+L
Sbjct: 196 ---GEDQLPHIELTREIARRFNNLYGEIFPEPEAILTKEAKLPGIDGRKMSKSYNNAIYL 252

Query: 248 -------NKEMTSPYNFWQYWRNI----DDA-DVVSFAKRLT--TLPMSEIDRMAKLQGK 293
                  NK+        Q  R       D   V  + K  T     + +ID   +    
Sbjct: 253 SDSEEEVNKKTMQMKTDPQRIRRTDPGNPDVCIVYDYHKIFTKDETLLKDIDNKCRKAEI 312

Query: 294 EINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSR 348
              + KKI+A  I   ++   E  K      E ++       +    I+++ +  
Sbjct: 313 GCTDCKKILAENINKFLNPIREKRKEIEKDYEKYEKVFIEGTLKCREIAENNMKE 367


>gi|323357078|ref|YP_004223474.1| tryptophanyl-tRNA synthetase [Microbacterium testaceum StLB037]
 gi|323273449|dbj|BAJ73594.1| tryptophanyl-tRNA synthetase [Microbacterium testaceum StLB037]
          Length = 334

 Score = 60.6 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 61/307 (19%), Positives = 101/307 (32%), Gaps = 55/307 (17%)

Query: 35  VVTAYIGYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSII--GDPSFRDESR 91
               Y G   +A SL  G+    L+    LQ   +     +    ++   GDP+ R E  
Sbjct: 3   QQRLYSGMQPSADSLQIGNYIGALLQWRQLQDE-YDAFFSVVDLHALTQPGDPAERREKT 61

Query: 92  RMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVN 151
           R   +Q I   IE  +        Y      A       W        +L  +  F    
Sbjct: 62  RRTAAQYIAAGIEPSRSTL-----YVQSHVPAHAE--LQW--------VLSTLTGFGEAG 106

Query: 152 RMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGID 211
           RM  F+   +R   +   +   F Y +L A D +     Y   +   G DQ  +I    D
Sbjct: 107 RMTQFKDKSARYGTDA-TNVGLFTYPVLMAADILL----YQTDVVPVGDDQKQHIELTRD 161

Query: 212 LGERLKT--PKLFALTSPLLTTASGT---------KMGKTL---SGAIW-LNKEMTSPYN 256
           L ER      + F +  P++   +           KM K+    +G +W L++   S   
Sbjct: 162 LAERFNQRFGETFTMPKPMIQRETARIYDLQNPTSKMSKSAESDAGVLWMLDEPKVSAKK 221

Query: 257 FWQYWRNIDDAD------------VVSFAKRLTTLPMSEIDRMAKL-QGKEINEAKKIIA 303
                R + D++            V +     + L   EI  +     G+   + KK +A
Sbjct: 222 I---MRAVTDSEGSVRFDRDEKPGVSNLLVIYSALTGREITAIEDEYAGRGYGDFKKGLA 278

Query: 304 TEITTMV 310
             +    
Sbjct: 279 EVVVNEF 285


>gi|195453306|ref|XP_002073730.1| GK12984 [Drosophila willistoni]
 gi|194169815|gb|EDW84716.1| GK12984 [Drosophila willistoni]
          Length = 426

 Score = 60.6 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 60/340 (17%), Positives = 109/340 (32%), Gaps = 48/340 (14%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGV-VTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           +  L +RG      +   +  L  QG     Y G   ++ SLH GHL    +  WLQ T 
Sbjct: 85  VHHLIKRGLFFSHRDLHSILTLKEQGKSFYLYTGRGPSSGSLHVGHLVPFFITKWLQDTF 144

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
             P+ +              D+ + + +  +I++ I+  +      +  G       + N
Sbjct: 145 DVPLVI-----------QLTDDEKVLWKDLKIEDAIKMGRENAKDIVALGFDVNKTFIFN 193

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA------ 181
           N  ++     +       +   + R ++F  V+       S    +  +   QA      
Sbjct: 194 NLEFMGKCPAM-----YQNIIRIQRCVTFNQVKGIFGFGDSDIIGKIGFPAAQAAPALSS 248

Query: 182 -YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKL---FALTSPLLTTASGTKM 237
            + F+   +   C +     DQ        D+  RL  PK     +   P L  A  TKM
Sbjct: 249 TFPFIFGNRKTACLIPC-AIDQDPYFRMTRDVAPRLGFPKCALLHSTFFPALQGAK-TKM 306

Query: 238 GKTLSG-AIWLN------KEMTSPYNFWQ----------YWRNIDDADVVSFAKRL--TT 278
             +    A++L       K   + Y F            +  N +        +      
Sbjct: 307 SASDQNSAVFLTDTPKQIKNKINKYAFSGGRTTVEEHREFGGNPEVDVAYQLLRFFLEDD 366

Query: 279 LPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEK 318
             + E+            E KK+    +T +V   + A K
Sbjct: 367 AKLEEVRVAYTKGEMLTGEIKKLAVETLTPIVEQHQAARK 406


>gi|328767017|gb|EGF77068.1| hypothetical protein BATDEDRAFT_20842 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 517

 Score = 60.6 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 46/276 (16%), Positives = 86/276 (31%), Gaps = 26/276 (9%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            L  R    +     ++  + +   +  Y G   T    H G+   +  +    K G + 
Sbjct: 8   ELITRNL-QEHLGGDKIKEVLATRDLKVYWGTAPTGKP-HIGYFVPMTKVADFLKAGCEV 65

Query: 71  ISLMGGGTSII---GDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
             L     + +     P    + R       I+  +  I       +K+  G +      
Sbjct: 66  TILFADMHAFLDNQKAPWDLLKLRTSYYEATIKSMLTSIGVPIEK-LKFVVGTSYQ---- 120

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
               L     +D+ R +          +   V  +++           Y +LQA D   L
Sbjct: 121 ----LSKEYSLDVYRLLSMTTEHAAKKAGAEVVKQVESPL---LSGLVYPLLQALDEEYL 173

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA-IW 246
                   Q GG DQ            +L   K   L + ++   SG+KM  +   + + 
Sbjct: 174 ----GVDAQFGGVDQRKIFTFAEKFLPQLGYAKRAHLMNVMVGGLSGSKMSSSDPDSKVD 229

Query: 247 LNKEMTSPYNFWQYWR----NIDDADVVSFAKRLTT 278
           L  E  S     +       N+DD  +++F K +  
Sbjct: 230 LLDEPDSVVAKLKKAFCEEGNVDDNPILAFIKAVVF 265


>gi|148653750|ref|YP_001280843.1| tryptophanyl-tRNA synthetase [Psychrobacter sp. PRwf-1]
 gi|148572834|gb|ABQ94893.1| tryptophanyl-tRNA synthetase [Psychrobacter sp. PRwf-1]
          Length = 365

 Score = 60.6 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 38/207 (18%), Positives = 66/207 (31%), Gaps = 41/207 (19%)

Query: 166 EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALT 225
           +Q ++   F Y +L A D +     +   + +G  DQ  +I    D+            T
Sbjct: 147 DQGITMGLFGYPVLMAADILMFNATH---VPVG-RDQIQHIEMARDIAGTFNHKYKSLFT 202

Query: 226 SP---------LLTTASGTKMGKTLSGAIWL----NKEMTSPYNFWQYWRNI-------- 264
            P         LLT   G KM K+    I L    N ++       +    I        
Sbjct: 203 LPSAVVDENVALLTGLDGRKMSKSYGNTIPLFGEYNPQVDPEKQMRKAIMQIVTNSQAPE 262

Query: 265 ----DDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIATEITTMVHGREEAEK 318
                D  V+ F          EI  +       I   +AK+I+  +I + +        
Sbjct: 263 EPKNPDDSVI-FEIYKAFGSTEEIADLRAQFEAGIAWGDAKQILFEKINSEI-------- 313

Query: 319 AATAAMECFDMSIHSQHMPTISISKDE 345
            A      F++  + + +  I +   E
Sbjct: 314 -APFRERYFELMANPKELEEILLMGAE 339


>gi|320581681|gb|EFW95900.1| Cytoplasmic tyrosyl-tRNA synthetase, class I aminoacyl-tRNA
           synthetase [Pichia angusta DL-1]
          Length = 400

 Score = 60.2 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 41/235 (17%), Positives = 77/235 (32%), Gaps = 27/235 (11%)

Query: 18  IHQISNPRELDILCSQG--VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMG 75
           + ++ NP+ +  +  +    +  Y G   T    H G+   +  L    K G +   L+ 
Sbjct: 19  LQEVLNPQIIKHVLEEEKRPLKVYWGTAPTGKP-HCGYFVPMTKLAHFLKAGCEVTVLLA 77

Query: 76  GGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK-YGTGKTDALMLNNETW-LC 133
              + +      D  +  +  + +    +  + +  S +K           +    + L 
Sbjct: 78  DLHAFL------DNMKAPL--EVVSYRAKYYEYVVKSILKSINVPIEKLRFVTGSEYQLK 129

Query: 134 SIKYIDLLREIGSFFSVNRMLSF---ESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
               +DL +   S F           E V+   + E  L      Y ++QA D   L   
Sbjct: 130 PEYTMDLFKL--SNFVTTHDAKRAGAEVVK---QVENPL-LSGLIYPLMQALDEEYL--- 180

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTAS-GTKMGKTLSGA 244
             C  Q GG DQ        +    L   K   L +P++     G KM  +   +
Sbjct: 181 -GCDAQFGGVDQRKIFTLAEENLTTLGYKKRAHLMNPMVPGLGQGGKMSASDPNS 234


>gi|301626308|ref|XP_002942334.1| PREDICTED: tyrosyl-tRNA synthetase, mitochondrial-like [Xenopus
           (Silurana) tropicalis]
          Length = 68

 Score = 60.2 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 13/63 (20%), Positives = 21/63 (33%), Gaps = 1/63 (1%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL-QDFDSTGNIKLSFGKKNHI 412
            L +K             + S  + IN+  ++N    +   Q     G   L  GKKN  
Sbjct: 2   DLCLKVSAVPEGARGYEMISSGGLSINHRKVTNPDEVLVPGQHILQNGLSLLRVGKKNFY 61

Query: 413 ICH 415
           +  
Sbjct: 62  VVK 64


>gi|78043829|ref|YP_360766.1| tryptophanyl-tRNA synthetase [Carboxydothermus hydrogenoformans
           Z-2901]
 gi|77995944|gb|ABB14843.1| tryptophanyl-tRNA synthetase [Carboxydothermus hydrogenoformans
           Z-2901]
          Length = 326

 Score = 60.2 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 55/298 (18%), Positives = 100/298 (33%), Gaps = 52/298 (17%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   T   LH GHL  L     LQ+   K   ++    ++         +      + +Q
Sbjct: 8   GMRPTGR-LHLGHLLVLENWVKLQEE-AKCFYMIADWHAL--------TTEYENTDEVLQ 57

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRM----LSF 156
                     ++ I     +  AL + +E      ++ +L    G F  ++ +       
Sbjct: 58  NIEYLALDFLAAGID---PEKSALFVQSEV----KEHAELALLFGMFTPLSWLERVPTYK 110

Query: 157 ESVRSRLKREQSLSFLEFN-YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER 215
           +      +  + L+   F  Y +LQA D +     Y   L   G DQ  ++    ++  R
Sbjct: 111 DQKEKLGEMGKDLNTYGFLGYPLLQAADILI----YRANLVPVGEDQLPHLELTREVARR 166

Query: 216 LK--------TPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRN-IDD 266
                      P+      PLL    G KM K+    I L+    +P    +  RN I D
Sbjct: 167 FNYLYGSVFPEPQAVLHAVPLLPGIDGRKMSKSYKNEIALSS---TPEEVSEQVRNMITD 223

Query: 267 A--------------DVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMV 310
                           V ++ +      ++EI+   +  G      KK +A +I  ++
Sbjct: 224 PARVRKTDPGHPEVCVVHTYYQVFYPEKVTEIEEQCRTAGIGCVACKKQLALKINEIL 281


>gi|320586713|gb|EFW99383.1| tyrosyl-tRNA synthetase [Grosmannia clavigera kw1407]
          Length = 396

 Score = 60.2 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 49/269 (18%), Positives = 96/269 (35%), Gaps = 29/269 (10%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGV-VTAYIGYDLTASSLHAGHLTQLML 59
           +P  K + L ++ E   + +I NP  ++ +  +G  V  Y G   T    H G+L   + 
Sbjct: 16  VPETKQEKLDLMYEN--LAEIINPEIIEKVLDEGRSVKVYWGTATTGRP-HTGYLVPAIK 72

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG 119
           +  L   G +   L+      +      D  +  +  + ++   +  +    + ++    
Sbjct: 73  IAQLLHAGCEVTVLLADIHGFL------DNLKAPL--ELVEHRTDYYQWTIRAMLQAVGV 124

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSV-----NRMLSFESVRSRLKREQSLSFLEF 174
           +T+ L     +     K  D + ++    SV      +    E V+        LS L  
Sbjct: 125 RTEQLRFVRGS--SYQKSADYVMDVYRLCSVTSEHDAKKAGAEVVKQ--TSNAPLSGL-- 178

Query: 175 NYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG 234
            Y ILQ  D   L       +Q GG DQ        +   +L   +   + +P++    G
Sbjct: 179 LYPILQILDEEHL----GVDVQFGGVDQRKLFTAAKEWLPKLGYRQRAHIMNPMIPGLHG 234

Query: 235 TKMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
            KM  +  G+      + +P    +  R 
Sbjct: 235 GKMSSSEEGS--KIDLLDTPEVISKKIRK 261


>gi|195330470|ref|XP_002031926.1| GM26274 [Drosophila sechellia]
 gi|194120869|gb|EDW42912.1| GM26274 [Drosophila sechellia]
          Length = 430

 Score = 60.2 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 60/334 (17%), Positives = 112/334 (33%), Gaps = 48/334 (14%)

Query: 15  RGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +   +  L  QG     Y G   ++ SLH GHL   ++  WLQ+T   P+ +
Sbjct: 95  RGMFFSHRDLHTILTLREQGKPFYLYTGRGPSSGSLHVGHLVPFIMTKWLQETFDVPLVI 154

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                         D+ + + +  ++++ I+  +      +  G       + NN  ++ 
Sbjct: 155 -----------QLTDDEKTLWKDLKVEDAIKLGRENAKDIVAMGFDVNKTFIFNNLEFVG 203

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA-------YDFVE 186
               +       +   + + ++F  V+       S    +  +   QA       + F+ 
Sbjct: 204 KCPAM-----YQNIIRIQKCVTFNQVKGIFGFGDSDIIGKIGFPAAQAAPAISSTFPFIF 258

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKL---FALTSPLLTTASGTKMGKT-LS 242
             +   C +     DQ        D+  RL  PK     +   P L  A  TKM  + L+
Sbjct: 259 GNRKVHCLIPC-AIDQDPYFRMTRDVAPRLGFPKCALIHSTFFPALQGAK-TKMSASDLN 316

Query: 243 GAIWLN------KEMTSPYNF---------WQYWRNIDDADV-VSFAKRL--TTLPMSEI 284
            A++L       K   + Y F          +    + + DV     K        + E+
Sbjct: 317 SAVFLTDTPKQIKNKINKYAFSGGRVTVEEHRKLGGVPEVDVSYQLLKFFLEDDAKLEEV 376

Query: 285 DRMAKLQGKEINEAKKIIATEITTMVHGREEAEK 318
                       E KK+    +T +V   + A K
Sbjct: 377 RVAYSKGEMLTGEIKKLAVETLTPIVEQHQAARK 410


>gi|195394551|ref|XP_002055906.1| GJ10514 [Drosophila virilis]
 gi|194142615|gb|EDW59018.1| GJ10514 [Drosophila virilis]
          Length = 430

 Score = 59.8 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 63/334 (18%), Positives = 114/334 (34%), Gaps = 48/334 (14%)

Query: 15  RGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +   +  L  QG     Y G   ++ SLH GHL   ++  WLQ+T + P+ +
Sbjct: 95  RGIFFSHRDLHTILTLHEQGKPFYLYTGRGPSSGSLHMGHLVPFIMTKWLQETFNVPLII 154

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                         D+ + + +  +I+E I+  +      +  G       + NN  ++ 
Sbjct: 155 -----------QLTDDEKTLWKDLKIEEAIKLARENAKDIVAMGFDLNKTFIFNNLEFMG 203

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA-------YDFVE 186
               +       +   + + ++F  V+       S    +  +   QA       + F+ 
Sbjct: 204 KCPAL-----YQNIIRIQKCVTFNQVKGIFGFGDSDIIGKIGFPAAQAAPALSSTFPFIF 258

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKL---FALTSPLLTTASGTKMGKTLSG 243
             K   C +     DQ        D+  RL  PK     +   P L  A  TKM  +   
Sbjct: 259 GNKKVHCLIPC-AIDQDPYFRMTRDVAPRLGFPKCALIHSSFFPALQGAK-TKMSASEQN 316

Query: 244 -AIWLN------KEMTSPYNF---------WQYWRNIDDADVVSFAKRLTTLPMSEIDRM 287
            A++L       K   + Y F          +    I + DV     +       +++ +
Sbjct: 317 SAVFLTDTPKQIKNKINKYAFSGGRTTVEEHRQLGGIPEIDVAYQLLKFFLEDDDKLEEV 376

Query: 288 AKLQGKEIN---EAKKIIATEITTMVHGREEAEK 318
               GK      E KK+    +T +V   + A K
Sbjct: 377 RVAYGKGEMLTGEIKKLAIETVTPIVEQHQAARK 410


>gi|320103412|ref|YP_004179003.1| tryptophanyl-tRNA synthetase [Isosphaera pallida ATCC 43644]
 gi|319750694|gb|ADV62454.1| tryptophanyl-tRNA synthetase [Isosphaera pallida ATCC 43644]
          Length = 327

 Score = 59.8 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 55/348 (15%), Positives = 108/348 (31%), Gaps = 71/348 (20%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   + + LH G+    +  +   +  +     +    ++          R     +   
Sbjct: 6   GIQPSGT-LHIGNYLGAIRQYLALQHDNDAFYFVADYHAL-------TSVRDAQTLRT-- 55

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNET--------WL-CSIKYIDLLREIGSFFSVN 151
                +  +    +  G     A +             WL  ++  +  L +  S+    
Sbjct: 56  ----NVFNVLVDLLALGLDPEKACVFVQSDVPETVELSWLLTTVTPMSWLEKCVSY---- 107

Query: 152 RMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGID 211
                + V   L  +  L    F Y ILQA D +     YD  L   G DQ  ++    D
Sbjct: 108 ----KDKVAQGLSADHGL----FAYPILQAADILI----YDADLVPVGQDQKQHLEITRD 155

Query: 212 LGERLKT---PKLFAL-------TSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYW 261
           + ER       ++F L       T  ++    G KM K+ +  I L +E   P +  +  
Sbjct: 156 VAERFNQTYRAEVFKLPQPRILPTVAVIPGTDGRKMSKSYANTIDLFEE---PASILKKV 212

Query: 262 RNI------------DD--ADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
           + +             D  + +  +        ++E +   +  G    E K+ +A  I 
Sbjct: 213 KRMVTDSKTVEEPKDPDTCSLMALYRHFADPDALAEAEAKYRAGGIGYGEMKQRLAQAII 272

Query: 308 TMVHGREEAEK---AATAAMECFDMSIHSQH--MPTISISKDEVSRGM 350
             +    E      A    +E F      +   +  I + +   + GM
Sbjct: 273 DHLAPARERRAEWVAHPERVEEFRRRGAERARKVARIVLDRAREAVGM 320


>gi|239907694|ref|YP_002954435.1| tryptophanyl-tRNA synthetase [Desulfovibrio magneticus RS-1]
 gi|239797560|dbj|BAH76549.1| tryptophanyl-tRNA synthetase [Desulfovibrio magneticus RS-1]
          Length = 335

 Score = 59.8 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 50/310 (16%), Positives = 97/310 (31%), Gaps = 58/310 (18%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGG---TSIIGDPSFRDESRRMMRSQ 97
           G   T + LH GH   ++  +   +  H+    +      T+   DP         +   
Sbjct: 15  GMRPTGA-LHLGHYFGVLKNWVNIQDSHECFFFVADWHALTTEYADPKRIKGFVPELVKD 73

Query: 98  EIQENIE---KIKGIFSSFIKYGTGKTDALMLNNETWLCS-IKYIDLLREIGSFFSVNRM 153
            +   ++    +    S   ++        M+   +WL     Y D L+E+ +       
Sbjct: 74  WVAAGLDPEKSVLFQQSQVKEHAELHLLLSMVTPVSWLERCPTYKDQLQELAAKELNTYG 133

Query: 154 LSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLG 213
                                 Y +L A D + L K     +   G DQ  ++    ++ 
Sbjct: 134 F-------------------LGYPVLMASDIL-LYKPGFVPV---GLDQLPHLELTREIA 170

Query: 214 ERLKT------PKLFALTSP--LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNI- 264
            R         P+  A+ +P   L    G KM K+   AI L++E   P    +   ++ 
Sbjct: 171 RRANHLYGNFFPEPQAMLTPDSKLPGLDGRKMSKSYGNAIGLSEE---PGAMKKKVMSML 227

Query: 265 --------DDA------DVVSFAKRLTT-LPMSEIDRMAKLQGKEINEAKKIIATEITTM 309
                    D       ++  + + LT    + EI            + KK++   +   
Sbjct: 228 TCEKRARLTDPGDPKECNLFPYHELLTDPARLPEIVDGCTHATWGCGDCKKLLVESMNAF 287

Query: 310 VHGREEAEKA 319
           +    +  KA
Sbjct: 288 LEPVRDRRKA 297


>gi|34495367|gb|AAQ73504.1| tyrosyl-t-RNA synthetase [Enterococcus hirae]
          Length = 44

 Score = 59.4 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 9/43 (20%), Positives = 17/43 (39%)

Query: 375 NAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
            AI IN   +++    I          + +  GKKN+ +  + 
Sbjct: 1   GAISINGDRVTDLNFVIDPSKEFDGKFVVIRKGKKNYFLAKVV 43


>gi|119717779|ref|YP_924744.1| tryptophanyl-tRNA synthetase [Nocardioides sp. JS614]
 gi|119538440|gb|ABL83057.1| tryptophanyl-tRNA synthetase [Nocardioides sp. JS614]
          Length = 352

 Score = 59.4 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 54/300 (18%), Positives = 105/300 (35%), Gaps = 53/300 (17%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKT--GHKPISLMGGGTSII--GDPSFRDESRRMMRS 96
           G   TA S H G+      L         ++P   +    +I    DP       +++R 
Sbjct: 26  GIQPTADSFHFGNYLG--ALRQWVDLQEDYQPFFFIADLHAITVEQDP-------KVLRE 76

Query: 97  QEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSF 156
           + ++   + I       +     ++   + +       + +  +L+ +  F    RM  F
Sbjct: 77  RTLRAAAQLIA------MGIDPDRSAIFVQSQVPEHAQLGW--VLQCLTGFGEARRMTQF 128

Query: 157 ESVRSRLKREQS-LSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER 215
           +      K  +   S   F Y ILQA D + L + +   +   G DQ  ++    DL +R
Sbjct: 129 KD--KSAKGGEGAASVGLFTYPILQAADIL-LYRPHYVPV---GEDQRQHLELTRDLAQR 182

Query: 216 LKT--PKLFALTSPLLTTASGT---------KMGKTLSGAIWLNKEMTSPYNFWQYWRN- 263
             +   K F L  P +  A+           KM K+ S    + + +  P    +  R+ 
Sbjct: 183 FNSRYKKTFRLPEPYILKATAKITDLQDPTSKMSKSASSPSGIVEMLDDPRVSAKKIRSA 242

Query: 264 IDDA------------DVVSFAKRLTTLPMSEI-DRMAKLQGKEINEAKKIIATEITTMV 310
           + D+             V +     + L    + D   + +G+   + KK +A  +   V
Sbjct: 243 VTDSGSEIRFDPETKPGVSNLLTIFSALTGRAVSDLEEEYEGRGYGDLKKELAETVVDFV 302


>gi|256397068|ref|YP_003118632.1| tryptophanyl-tRNA synthetase [Catenulispora acidiphila DSM 44928]
 gi|256363294|gb|ACU76791.1| tryptophanyl-tRNA synthetase [Catenulispora acidiphila DSM 44928]
          Length = 346

 Score = 59.4 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 55/357 (15%), Positives = 110/357 (30%), Gaps = 49/357 (13%)

Query: 32  SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSII--GDPSFRDE 89
           S G    + G   TA S H G+    +  +   +  H  +  +    +I    DP     
Sbjct: 10  SSGRKRVFSGIQPTADSFHVGNYLGAIRQWVPLQETHDTVYCVVDLHAITVEQDP----- 64

Query: 90  SRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFS 149
             +++R +      + +             ++         W        +L  +  F  
Sbjct: 65  --KLLRQRTRVAAAQLMAAGIDPGRSTLFVQSHVPEHAQLAW--------VLTCMTGFGE 114

Query: 150 VNRMLS-FESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIIC 208
             RM    +    +     ++    F Y +L A D + L    +  +   G DQ  ++  
Sbjct: 115 AGRMTQFKDKSGKQGSANTNVGL--FTYPMLMAADVL-LYNADEVPV---GEDQRQHLEL 168

Query: 209 GIDLGERLKTPKLFALTSP---LLTTAS--------GTKMGKTLSGAIWLNKEMTSPYNF 257
             DL +R         T P   ++            G KM K+ S    + + +  P   
Sbjct: 169 TRDLAQRFNGRYGAYFTVPDPYIIKATGKITDLQEPGAKMSKSASSPAGIIELLDDPKVS 228

Query: 258 WQYWRN-IDDAD------------VVSFAKRLTTLPMSEIDRMAKL-QGKEINEAKKIIA 303
            +  R+ + D +            + +     + L    I  +    +GK   + KK +A
Sbjct: 229 AKKIRSAVTDTEREIRYDEQNKAGISNLLSIYSALDGRTIAELETAYEGKGYGDLKKDLA 288

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
                 V    E  +A  A  +  D  +        +I+   ++     +  +  AG
Sbjct: 289 EVFVDFVTPFRERTQAILAEPDKLDAVLAEGAAKARAIATRTLAEVYDRVGFLPAAG 345


>gi|307297961|ref|ZP_07577765.1| tryptophanyl-tRNA synthetase [Thermotogales bacterium mesG1.Ag.4.2]
 gi|306916047|gb|EFN46430.1| tryptophanyl-tRNA synthetase [Thermotogales bacterium mesG1.Ag.4.2]
          Length = 327

 Score = 59.4 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 45/306 (14%), Positives = 87/306 (28%), Gaps = 45/306 (14%)

Query: 49  LHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMM--RSQEIQENIEKI 106
           LH G+   L     LQ  G++    +     +    S  DE+          ++  +   
Sbjct: 13  LHLGNFITLEKWKELQDQGNECFYFVANWHGLT---SHIDETSSFYDWSLDIVRTYVSAG 69

Query: 107 KGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSV-NRMLSFESVRSRLKR 165
                S +   +   +   L          Y  +L  +     V       E +  R   
Sbjct: 70  LDPEKSVLFIQSAIKEHAEL--------FLYFSMLVSVSRLERVPTYKDQKEQITDRDLS 121

Query: 166 EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT------- 218
                     Y +LQA D + +       +   G DQ  ++    ++  +          
Sbjct: 122 SGGF----LLYPVLQAADIL-MYLATGVPV---GEDQIYHVELTREIARKFNNQFAEVFP 173

Query: 219 -PKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNID---------DAD 268
            P+      P L    G KM K+    I ++ +    +                   D +
Sbjct: 174 EPEPILAKVPKLPGTDGRKMSKSYGNYILIDTDEKELWKMIAPMMTDPARMRRTDRGDPE 233

Query: 269 ---VVSFAKRLTTLPMSE--IDRMAKLQGKEINEAKKIIATEITTMVHGR-EEAEKAATA 322
              V  + K  TT    +  +    K  G    E K+++   +   +    E+       
Sbjct: 234 KCPVWDYHKAFTTSDEEKRWVVEGCKTAGIGCIECKRLLHKNLVQRLSPVWEKLSHLKEN 293

Query: 323 AMECFD 328
           + E F+
Sbjct: 294 SDELFE 299


>gi|19173652|ref|NP_597455.1| TYROSYL tRNA SYNTHETASE [Encephalitozoon cuniculi GB-M1]
 gi|74630141|sp|Q8SRV7|SYYC_ENCCU RecName: Full=Probable tyrosyl-tRNA synthetase, cytoplasmic;
           AltName: Full=Tyrosyl--tRNA ligase; Short=TyrRS
 gi|19170858|emb|CAD26632.1| TYROSYL tRNA SYNTHETASE [Encephalitozoon cuniculi GB-M1]
          Length = 337

 Score = 59.4 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 46/254 (18%), Positives = 77/254 (30%), Gaps = 21/254 (8%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R    +I    EL  + S+  +  Y G  +T    H  +L  LM +      G    
Sbjct: 9   LITRNL-QEILGEEELKRIVSERELNVYWGTAITGKP-HIAYLVPLMKIKDFVDAGCNVK 66

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD-ALMLNNET 130
            L       + +             +++Q      + +  S +K      D    +    
Sbjct: 67  ILFADIHGFLDNLKA--------PIEKVQHRCAYYEKLIKSALKMLCVDLDRIQFVKGSE 118

Query: 131 W-LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
           +       +DL R +      +   +   V  +++           Y  +QA D V L+ 
Sbjct: 119 FQKSERYTMDLYRILSITSKHDAKKAGAEVVRQVENP---MVSSLVYPSMQALDEVHLS- 174

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
                 Q GG DQ             L   K   L SP+L   +  KM  +    +    
Sbjct: 175 ---VDAQFGGVDQRKIFTYARKYLPLLNYEKRIHLMSPMLPGLNSDKMSSSDD--LSKID 229

Query: 250 EMTSPYNFWQYWRN 263
            M S    W+  R 
Sbjct: 230 LMDSKEAIWRKIRK 243


>gi|242278582|ref|YP_002990711.1| tryptophanyl-tRNA synthetase [Desulfovibrio salexigens DSM 2638]
 gi|242121476|gb|ACS79172.1| tryptophanyl-tRNA synthetase [Desulfovibrio salexigens DSM 2638]
          Length = 331

 Score = 59.4 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 51/298 (17%), Positives = 104/298 (34%), Gaps = 52/298 (17%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMR--SQE 98
           G   T   LH GH   +++ +   +  H+    +    ++  + S   + R++     + 
Sbjct: 11  GMRPTGR-LHLGHYFGVLVNWVRIQEDHECYFFVADWHAMTSEYS---DPRKIQGFVPEL 66

Query: 99  IQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIG--SFFSVNRMLSF 156
           +++ I          I + +   + + L+          + +L  +G        + L  
Sbjct: 67  VKDWIAAGLDPEKCVIFHQSQVKEHIELH--------LILSMLTPLGWLERNPTYKELKQ 118

Query: 157 ESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL 216
           E V+  L       FL   Y +L A D + + K     +   G DQ  ++    ++  R 
Sbjct: 119 ELVQKELNT---YGFL--GYPVLMASDIL-MYKPSQVPV---GQDQLPHLELAREIARRF 169

Query: 217 K--TPKLFALTSPLLT------TASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNI---- 264
                + F     LLT         G KM K+ +  I+L + M           ++    
Sbjct: 170 NHLNGEFFPEPKALLTEDAKLPGLDGRKMSKSYNNGIYLGESMD---EVKPKVMSMLTDK 226

Query: 265 --------DDADVVS---FAKRLTTLPM-SEIDRMAKLQGKEINEAKKIIATEITTMV 310
                    D +V +   + K LT     +EI+   +   +   E KK++A  +   +
Sbjct: 227 NRLRKSDPGDPEVCNLYPYHKLLTDADTCAEIEEGCRNASRGCVECKKLLAENMAKFL 284


>gi|164661643|ref|XP_001731944.1| hypothetical protein MGL_1212 [Malassezia globosa CBS 7966]
 gi|159105845|gb|EDP44730.1| hypothetical protein MGL_1212 [Malassezia globosa CBS 7966]
          Length = 398

 Score = 59.4 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 41/235 (17%), Positives = 78/235 (33%), Gaps = 23/235 (9%)

Query: 11  ILSERGFIHQISNPRELDILC--SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
            L  RG I ++     +  +   ++  +  Y G   T    H G+L  L  L    + G 
Sbjct: 14  ELITRG-IEEVIGGDLIQKILEENERPLKCYWGTAPTGRP-HVGYLVPLTKLADFLRAGV 71

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD--ALML 126
           +   L     + +      D  +  +  + ++   E  + I +  +K     TD    +L
Sbjct: 72  QVKVLFADIHAFL------DNMKAPI--ELVKHRAEYYRQILTCVMKSIGVPTDRLTFVL 123

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
            +   L      D+ R        +   +   V  ++            Y  LQA D   
Sbjct: 124 GSSYQLTEKYNFDVYRLAAMVTEHDAKKAGAEVVKQVASPL---LSGLLYPGLQALDEQF 180

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALTSPLLTTASGTKMGKT 240
           L    D   Q GG DQ    +       +L    +   + + ++   +G+KM  +
Sbjct: 181 L----DVDFQFGGLDQRKIFMFAEQYLPKLGYMKRAHVM-NGMVPGMNGSKMSSS 230


>gi|195572333|ref|XP_002104150.1| GD20809 [Drosophila simulans]
 gi|194200077|gb|EDX13653.1| GD20809 [Drosophila simulans]
          Length = 430

 Score = 59.1 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 59/334 (17%), Positives = 110/334 (32%), Gaps = 48/334 (14%)

Query: 15  RGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +   +  L  QG     Y G   ++ SLH GHL   ++  WLQ+T   P+ +
Sbjct: 95  RGMFFSHRDLHTILTLREQGKPFYLYTGRGPSSGSLHVGHLVPFIMTKWLQETFDVPLVI 154

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                         D+ + + +  ++++ I+  +      +  G       + NN  ++ 
Sbjct: 155 -----------QLTDDEKTLWKDLKVEDAIKLGRENAKDIVAMGFDVNKTFIFNNLEFVG 203

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA-------YDFVE 186
               +       +   + + ++F  V+       S    +  +   QA       + F+ 
Sbjct: 204 KCPAM-----YQNIIRIQKCVTFNQVKGIFGFGDSDIIGKIGFPAAQAAPAISSTFPFIF 258

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKL---FALTSPLLTTASGTKMGKTLSG 243
             +   C +     DQ        D+  RL  PK     +   P L  A  TKM  +   
Sbjct: 259 GNRKVHCLIPC-AIDQDPYFRMTRDVAPRLGFPKCALIHSTFFPALQGAK-TKMSASDQN 316

Query: 244 -AIWLN------KEMTSPYNF---------WQYWRNIDDADV-VSFAKRL--TTLPMSEI 284
            A++L       K   + Y F          +    + + DV     K        + E+
Sbjct: 317 SAVFLTDTPKQIKNKINKYAFSGGRVTVEEHRKLGGVPEVDVSYQLLKFFLEDDDKLEEV 376

Query: 285 DRMAKLQGKEINEAKKIIATEITTMVHGREEAEK 318
                       E KK+    +T +V   + A K
Sbjct: 377 RVAYSKGEMLTGEIKKLAVETLTPIVEQHQAARK 410


>gi|95930329|ref|ZP_01313066.1| tryptophanyl-tRNA synthetase [Desulfuromonas acetoxidans DSM 684]
 gi|95133581|gb|EAT15243.1| tryptophanyl-tRNA synthetase [Desulfuromonas acetoxidans DSM 684]
          Length = 321

 Score = 59.1 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/218 (14%), Positives = 68/218 (31%), Gaps = 34/218 (15%)

Query: 41  GYDLTASSLHAGHLTQLML-LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           G   +  SLH G+   +M  +   Q+ G +    +    ++      +      +    +
Sbjct: 6   GIQPSG-SLHLGNYFGMMKKMIDYQEQG-ELFCFIANYHAMTSVSDGKA-----LAKGTL 58

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETW-LCSIKYIDLLREIGSFFSVNRMLSFES 158
           +     +             ++D   +    W L +   + LL    S+         + 
Sbjct: 59  EAAANFLALGMDPERSTFWVQSDVPEVQELAWFLSNFTPMGLLERCHSY--------KDK 110

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
           +   +     L    F Y +L + D +    +   ++ +G  DQ  ++    D+  ++  
Sbjct: 111 IAKGIAANHGL----FAYPVLMSADILIFNSD---KVPVG-KDQKQHVEVTRDIAAKVNN 162

Query: 219 PKLFALTSP---------LLTTASGTKMGKTLSGAIWL 247
                 T P          +    G KM K+    I L
Sbjct: 163 EYGEIFTLPEPDIDDDVATVPGLDGQKMSKSYGNTIDL 200


>gi|119193446|ref|XP_001247329.1| tyrosyl-tRNA synthetase, cytoplasmic [Coccidioides immitis RS]
 gi|303312069|ref|XP_003066046.1| tyrosyl-tRNA synthetase, cytoplasmic, putative [Coccidioides
           posadasii C735 delta SOWgp]
 gi|240105708|gb|EER23901.1| tyrosyl-tRNA synthetase, cytoplasmic, putative [Coccidioides
           posadasii C735 delta SOWgp]
 gi|320040022|gb|EFW21956.1| tyrosyl-tRNA synthetase [Coccidioides posadasii str. Silveira]
          Length = 412

 Score = 59.1 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 40/241 (16%), Positives = 74/241 (30%), Gaps = 36/241 (14%)

Query: 3   AFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
             KS+ L  +  R                       Y G   T   +H G+L  ++ L  
Sbjct: 21  VLKSEILEDIIIR----------------QNRAPVIYWGTASTGR-IHLGYLVPIVKLAH 63

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK--YGTGK 120
             + G     L+      + +             + +    E  +   ++ ++  +    
Sbjct: 64  FLRAGCHIKILLADIHGFLDNLKA--------PIELVNFRAEYYRHSITALLEAVHVPTD 115

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSV-NRMLSFESVRSRLKREQSLSFLEFNYMIL 179
               +L +   L     +DL R          +    E V+        LS L   Y ++
Sbjct: 116 KLEFVLGSSYQLSPKYTMDLFRLSSVVTEHDAKKAGAEVVKQ--VDNAPLSGL--IYPLM 171

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK 239
           QA D   L        Q GG DQ       ++   R+   +   L +P++   +G KM  
Sbjct: 172 QALDEEHL----GVDAQFGGVDQRKIFTLAMETLPRVGYKERAHLMNPMVPGLAGGKMSA 227

Query: 240 T 240
           +
Sbjct: 228 S 228


>gi|182413926|ref|YP_001818992.1| tryptophanyl-tRNA synthetase [Opitutus terrae PB90-1]
 gi|177841140|gb|ACB75392.1| tryptophanyl-tRNA synthetase [Opitutus terrae PB90-1]
          Length = 321

 Score = 59.1 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 47/304 (15%), Positives = 91/304 (29%), Gaps = 43/304 (14%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   + + LH G+   +M      +   +    +    S+        E RR        
Sbjct: 6   GIQPSGT-LHIGNYFGMMKPAIELQERGEAYYFIADYHSMTSLFDP--EQRRQNTLGVAL 62

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           + +        S     +   +            + +I     IG+   +  +    S +
Sbjct: 63  DFLACGLDPKRSVFWRQSDVAEVT---------ELTWI-----IGTLTPMGLLERAHSYK 108

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            +  R  S +F  F Y +L A D +     +D  L   G DQ  ++    D+  +     
Sbjct: 109 DKTARGISPNFGLFAYPVLMAADILL----FDSNLVPVGRDQKQHVEMTRDIAIKFNQAY 164

Query: 221 LFALTSP---------LLTTASGTKMGKTLSGA--IWLNKEMTSPYNFWQYWR------- 262
              L  P         ++    G KM K+      I+ +++                   
Sbjct: 165 GETLVVPEPEIRDETAIVPGLDGQKMSKSYGNTVEIFGDEKAIRKKIMGIKMDSRTPAEP 224

Query: 263 --NIDDADVVSFAKRLTTLPMS-EIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKA 319
             N D    +   K +    ++ E +   +  G    + KK +  E          A++A
Sbjct: 225 KPNADQNIAIQLLKLVAPAEVARETEERLRAGGLGYGDLKKAL-FEHYWSFFAPARAKRA 283

Query: 320 ATAA 323
             AA
Sbjct: 284 ELAA 287


>gi|330946850|ref|XP_003306810.1| hypothetical protein PTT_20053 [Pyrenophora teres f. teres 0-1]
 gi|311315509|gb|EFQ85089.1| hypothetical protein PTT_20053 [Pyrenophora teres f. teres 0-1]
          Length = 453

 Score = 58.7 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 50/275 (18%), Positives = 91/275 (33%), Gaps = 46/275 (16%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQ-GVVTAYIGYDLTASSLHAGHLTQLML 59
           M   K +   +L          NP  +D    + G +  Y G   T    H G+   ++ 
Sbjct: 57  MALIKVNLAEVL----------NPEIMDEALKKQGHLKVYWGTATTGRP-HCGYFVPILK 105

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT- 118
           L      G     L+      + +             + ++   E  +   ++ +K    
Sbjct: 106 LAQFLAAGCHVKILLADIHGFLDNLKA--------PIELVKFRAEYYRFTITALLKAVKV 157

Query: 119 --GKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNY 176
              K + ++ ++   L +   +DLLR            +   V  +      LS L   Y
Sbjct: 158 PIDKLEFVLGSSYE-LNADYTMDLLRLASITSEAAAKKAGAEVVKQ-TENAPLSGL--IY 213

Query: 177 MILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTK 236
            ++QA D   L    D  +Q GG DQ        D+  ++   +   L +P++    G K
Sbjct: 214 PLMQALDEQYL----DVDVQFGGVDQRKIFALAKDVLPKIGYKERAHLMNPMVPGLQGGK 269

Query: 237 MGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVS 271
           M  +       + +             +DDADVV 
Sbjct: 270 MSAS-------DPD--------SKIDVLDDADVVK 289


>gi|150951268|ref|XP_001387562.2| tyrosyl-tRNA synthetase [Scheffersomyces stipitis CBS 6054]
 gi|149388453|gb|EAZ63539.2| tyrosyl-tRNA synthetase [Pichia stipitis CBS 6054]
          Length = 404

 Score = 58.7 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 37/247 (14%), Positives = 80/247 (32%), Gaps = 51/247 (20%)

Query: 18  IHQISNPRELDILCSQG--VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMG 75
           + ++ N + +  +  +    V  Y+G   T    H G+   ++ L    K G +   L+ 
Sbjct: 18  LQEVLNGQIIKDVLEKEKRPVKIYLGTAPTGKP-HCGYFVPMIKLAHFLKAGCEVTVLLA 76

Query: 76  GGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSI 135
              + +      D  +  +  + +Q   +  + +  + ++                    
Sbjct: 77  DLHAYL------DNMKAPL--EVVQYRAKYYEYVIKAMLR-----------------SIN 111

Query: 136 KYIDLLR-EIGSFFSVNRMLSFESVR----------SRLKRE------QSLSFLEFNYMI 178
             ID LR  +GS + ++   + +  +           R   +        L      Y +
Sbjct: 112 VPIDKLRFVVGSEYQLSAQYTMDIFKLSNVVSQNDAKRAGADVVKQVANPL-LSGLIYPL 170

Query: 179 LQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTAS-GTKM 237
           +QA D   L        Q GG DQ    +   +    +   K   L +P++     G KM
Sbjct: 171 MQALDEEHL----GVDAQFGGVDQRKIFVLAEENLPSVGYKKRAHLMNPMVPGLGQGGKM 226

Query: 238 GKTLSGA 244
             +   +
Sbjct: 227 SASDPNS 233


>gi|195499364|ref|XP_002096918.1| GE24790 [Drosophila yakuba]
 gi|194183019|gb|EDW96630.1| GE24790 [Drosophila yakuba]
          Length = 430

 Score = 58.7 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 60/334 (17%), Positives = 110/334 (32%), Gaps = 48/334 (14%)

Query: 15  RGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +   +  L  QG     Y G   ++ SLH GHL   ++  WLQ+T   P+ +
Sbjct: 95  RGMFFSHRDLHTILTLREQGKPFYLYTGRGPSSGSLHVGHLVPFIMTKWLQETFDVPLVI 154

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                         D+ + + +  ++++ I+  +      +  G       + NN  ++ 
Sbjct: 155 -----------QLTDDEKTLWKDLKVEDAIKLGRENAKDIVAMGFDVNKTFIFNNLEFVG 203

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA-------YDFVE 186
               +       +   + + ++F  V+       S    +  +   QA       + F+ 
Sbjct: 204 KCPAM-----YQNIIRIQKCVTFNQVKGIFGFGDSDIIGKIGFPAAQAAPAISSTFPFIF 258

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKL---FALTSPLLTTASGTKMGKTLSG 243
             K   C +     DQ        D+  RL  PK     +   P L  A  TKM  +   
Sbjct: 259 GNKKVHCLIPC-AIDQDPYFRMTRDVAPRLGYPKCALMHSTFFPALQGAK-TKMSASDQN 316

Query: 244 -AIWLN------KEMTSPYNF---------WQYWRNIDDADV-VSFAKRL--TTLPMSEI 284
            A++L       K   + Y F          +    + + DV     K        + E+
Sbjct: 317 SAVYLTDTPKQIKNKINKYAFSGGRVTVEEHRKLGGVPEVDVSYQLLKFFLEDDAKLEEV 376

Query: 285 DRMAKLQGKEINEAKKIIATEITTMVHGREEAEK 318
                       E KK+    +T +V   + A K
Sbjct: 377 RVAYSKGEMLTGEIKKLAVETLTPIVEQHQAARK 410


>gi|255578670|ref|XP_002530195.1| tryptophanyl-tRNA synthetase, putative [Ricinus communis]
 gi|223530288|gb|EEF32185.1| tryptophanyl-tRNA synthetase, putative [Ricinus communis]
          Length = 405

 Score = 58.3 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 60/340 (17%), Positives = 104/340 (30%), Gaps = 55/340 (16%)

Query: 15  RGFIHQISNPRELDILCSQGVV-TAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +  ++     +G     Y G   ++ SLH GHL   M   +LQ+    P+ +
Sbjct: 70  RGVFFAHRDFNDILDAFEKGKQFYLYTGRGPSSESLHLGHLVPFMFTKYLQEAFRVPLVI 129

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                      +   E  + +  +  ++ I     +  +FI             N     
Sbjct: 130 QLTDDEKCMWKNLSVEESKRLARENARDIIACGFDVSRTFIFQDFNYVAGSFYEN----- 184

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY-----DFVELA 188
                  + ++    + N+++           E  +  + F    +QA       F  L 
Sbjct: 185 -------MVKVEKCVTYNKVVG--IFG--FTGEDHIGKVSF--PAVQAVPSFPSSFPHLF 231

Query: 189 K---NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLF---ALTSPLLTTASGTKMGKTLS 242
               +  C +     DQ        D+  RL   K     +L  P L   +G KM  +  
Sbjct: 232 SGKDDIRCLIPC-AIDQDPYFRMTRDVAPRLGFHKPSLIESLFFPALQGETG-KMSASDP 289

Query: 243 G-AIWLN------KEMTSPYNFWQ----------YWRNIDDADVVSFAKRLTTLPMSEID 285
             AI+L       K   + Y F            Y  N++    V +      L   +  
Sbjct: 290 NSAIYLTDSAKEIKNKINKYAFSGGQDSLEKHRKYGANLEVDIPVKYLNF--FLEDDDEL 347

Query: 286 RMAKLQGKEIN----EAKKIIATEITTMVHGREEAEKAAT 321
              K +         E KK +A  +T +V     A  A T
Sbjct: 348 EHIKTEYAAGRMLTGEVKKRLAEVLTEIVERHRVARSAVT 387


>gi|256072924|ref|XP_002572783.1| tyrosyl-tRNA synthetase [Schistosoma mansoni]
 gi|238657948|emb|CAZ29015.1| tyrosyl-tRNA synthetase, putative [Schistosoma mansoni]
          Length = 1010

 Score = 58.3 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 42/229 (18%), Positives = 79/229 (34%), Gaps = 22/229 (9%)

Query: 18  IHQISNPRELDILCSQ--GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMG 75
           + ++    EL  L  +    V+ Y G   T    H  +   ++ L  + KTG K   L  
Sbjct: 13  LQEVVGDDELQNLLKKPNSSVSVYWGTATTGRP-HIAYFVPIIKLADMLKTGAKVTVLFA 71

Query: 76  GGTSIIGDPSFRDESRRM-MRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW-LC 133
              + +   + +     + +R++  +  I+ +       +           +    + L 
Sbjct: 72  DLHAYL--DNMKAPWSLLCLRTKYYEAVIKGMFRSICVPLDRL------HFVRGADYQLT 123

Query: 134 SIKYIDLLREIG-SFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYD 192
               +D+ R +  +     R    E V+   +    L      Y +LQA D V L     
Sbjct: 124 EEYSMDVYRLMALTSVHDARKAGAEVVK---QVNNPL-VSGLLYPLLQALDEVHLK---- 175

Query: 193 CRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
             +Q GG DQ    +        L   K   L +P++   +G KM  + 
Sbjct: 176 VDIQFGGVDQRKIFMLAEKYLPHLGHKKRIHLMNPMVPGLTGGKMSSSE 224


>gi|167045012|gb|ABZ09676.1| putative tRNA synthetases class I (W and Y) [uncultured marine
           crenarchaeote HF4000_APKG8G15]
          Length = 348

 Score = 58.3 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 34/235 (14%), Positives = 76/235 (32%), Gaps = 28/235 (11%)

Query: 21  ISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQL-MLLFWLQKTGHKPISLMGGGTS 79
           ++    L++  +      YIG +++   LH G L      +    K G      +    +
Sbjct: 19  VTQEELLELFKTNSKPKHYIGIEISG-FLHLGSLISTSFKINDFVKAGVDCTVFLADWHT 77

Query: 80  IIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYID 139
           ++ +             + I++  +  +  F              + ++        + +
Sbjct: 78  LLNEKLGG-------NFETIRKVSKYYEDAFRLVCPEANVVLGTDLYDS----KKEYWSE 126

Query: 140 LLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGG 199
            + +I    S+ R +   ++  R + ++ +   +  Y  +QA D   L    D  +   G
Sbjct: 127 FV-QIAKHMSLARTMRTLTIMGRSENDEKVDLAKLIYPAMQATDIHSL----DLDIVHAG 181

Query: 200 SDQWGNIICGIDL---GERLKTPKLF-----ALTSPLLTTASGT--KMGKTLSGA 244
            DQ    +   D+    +      +       LT P      G   KM K+   A
Sbjct: 182 MDQRKIHMLVKDVFPKMKWKVPVAVHHKLLPGLTKPAAEIPDGEVAKMSKSDPNA 236


>gi|223940279|ref|ZP_03632137.1| tryptophanyl-tRNA synthetase [bacterium Ellin514]
 gi|223891046|gb|EEF57549.1| tryptophanyl-tRNA synthetase [bacterium Ellin514]
          Length = 321

 Score = 58.3 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 50/305 (16%), Positives = 92/305 (30%), Gaps = 45/305 (14%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   + + LH G+   +M      +   +    +    S+     F  E RR        
Sbjct: 6   GIQPSGA-LHLGNYFGMMRPAIELQERGEAYYFIANYHSMTS--LFEAEPRRKNTLDVAL 62

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETW-LCSIKYIDLLREIGSFFSVNRMLSFESV 159
           + +        S       ++D   +    W L ++  + LL    S             
Sbjct: 63  DFLACGLDPKKSVF---FKQSDVPEVTELAWILTTLTPMGLLERCTS------------Y 107

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL----GER 215
           + +L R  S     F Y +L A D +     YD  +   G DQ  ++    D+     E+
Sbjct: 108 KDKLARGISPYHGLFAYPVLMAADILI----YDSNIVPVGKDQKQHVEVTRDIAVKFNEQ 163

Query: 216 LKT-----PKLFALTSPLLTTASGTKMGKTLSGAI-WLNKEMTSPYNFWQYWRNI----- 264
                          + L+    G KM K+    I    +E  +         +      
Sbjct: 164 YGQTFVIPEPQIREETALIPGTDGQKMSKSYGNTIEIFGEEKATRKKIMGLVMDSRTPAE 223

Query: 265 --DDAD---VVSFAKRLTTLPMS-EIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEK 318
              DAD    +   K +    ++ + +   +  G    + KK +  E          A++
Sbjct: 224 PKPDADKNTAIQLLKLVAPADVAKDFEERLRAGGLGYGDLKKAL-FEHYWNYFSSARAKR 282

Query: 319 AATAA 323
           A   A
Sbjct: 283 AELVA 287


>gi|296425898|ref|XP_002842475.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295638743|emb|CAZ86666.1| unnamed protein product [Tuber melanosporum]
          Length = 418

 Score = 58.3 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/217 (14%), Positives = 69/217 (31%), Gaps = 18/217 (8%)

Query: 30  LCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDE 89
           L     +  Y G   T    H G+   ++ L    + G +   L+    + +      D 
Sbjct: 36  LAENRPLKIYWGTAPTGRP-HCGYFVPMVKLAHFLRAGCEVTVLLADIHAFL------DN 88

Query: 90  SRRMMRSQEIQENIEKIKGIFSSFIKY--GTGKTDALMLNNETWLCSIKYIDLLREIGSF 147
            +  +  + +    +  + +  S ++      +    +L +     +   +DL R     
Sbjct: 89  LKAPL--ELVTHRAKYYELVIKSVLRAIGVPIEKLRFVLGSSYQKGAAYVMDLFRLSSIV 146

Query: 148 FSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNII 207
              +   +   V  ++            Y ++QA D   L        Q GG DQ     
Sbjct: 147 TEHDAKKAGAEVVKQVASPL---LSGLIYPLMQALDEEHL----GVDAQFGGVDQRKIFT 199

Query: 208 CGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
              +    +   +   L +P++   +G KM  +   +
Sbjct: 200 LAAENLPGIGFKERAHLMNPMVPGLAGGKMSASDPNS 236


>gi|159111323|ref|XP_001705893.1| Tyrosyl-tRNA synthetase [Giardia lamblia ATCC 50803]
 gi|157433984|gb|EDO78219.1| Tyrosyl-tRNA synthetase [Giardia lamblia ATCC 50803]
          Length = 387

 Score = 58.3 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 51/305 (16%), Positives = 101/305 (33%), Gaps = 39/305 (12%)

Query: 2   PAFKSDFLSILSERGFIHQISNPRELDILCS---QGVVTAYIGYDLTASSLHA--GHLTQ 56
           PA K   L  L+E      I  P EL  L        +T Y G++ +   +H   G    
Sbjct: 12  PAQKQHLLEKLAE-----DIMCPEELHALLHADGNKRLTCYDGFEPSGR-IHIAQGIAKA 65

Query: 57  LMLLFWLQKTGHKPISLMGGGTSIIGDP-SFRDESRRMMRSQEIQENIEKIKGIFSSFIK 115
           + +   L ++G   +  +    + + +         +++    ++          S  + 
Sbjct: 66  INV-NRLLRSGIDCVFYVADWFAALNNKCDAELSKIQILGRYFVEVWKACGMLGVSKPVV 124

Query: 116 YGTG-KTDALMLNNETWLCSIKYIDLLR--EIGSFFSVNRMLSFESVRSRLK-REQSLSF 171
           + TG K     +    ++        +R   I   F+V RM    ++  R +  +Q +S 
Sbjct: 125 FSTGQKASVRFVWASEFIRQNSSSYWMRVMNIARSFTVPRMQRCSTIMGRTEGDDQPIS- 183

Query: 172 LEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL----GERLKTPKLFALTSP 227
            +  Y  +Q  D  EL  +    L   G DQ        D      E      +  +   
Sbjct: 184 -QILYPSMQCADIFELKLD----LVEMGLDQRKVNALARDYCDKSVELRHHKPVILMHHM 238

Query: 228 LLTTASGTKMGKTLSG-AIWLNKEMTSPYNFWQYWRNIDDAD--------VVSFAKRLTT 278
           LL      KM K++   AI+++          +   N    +        ++ + K +  
Sbjct: 239 LLGLVGDGKMSKSVPDSAIYMDDSF---EEIQRKIMNASCPEPGAESGNPILEYYKYIVF 295

Query: 279 LPMSE 283
             + +
Sbjct: 296 GAIEQ 300


>gi|94984558|ref|YP_603922.1| tryptophanyl-tRNA synthetase II [Deinococcus geothermalis DSM
           11300]
 gi|94554839|gb|ABF44753.1| tryptophanyl-tRNA synthetase [Deinococcus geothermalis DSM 11300]
          Length = 342

 Score = 58.3 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 35/219 (15%), Positives = 64/219 (29%), Gaps = 26/219 (11%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
            T   LH GH    +      +  +    L+    ++  +     + R+ +    +    
Sbjct: 12  PTGP-LHIGHYVGSLRNRVALQHDYDTYILIADVQALTDNFENPRKVRQAVLEVALDYLA 70

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL 163
             +    ++F+        A +      +  +  + +     S    N  +  E  +   
Sbjct: 71  VGLDPAVTTFVIQSQVPEIAELT-----VFYLNLVTV-----SHLRQNPTVKTEIAQKGY 120

Query: 164 KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFA 223
                  F  F Y + QA D       +   L   G DQ   I    ++  R        
Sbjct: 121 GEAVPAGF--FVYPVSQAADITA----FGAHLVPVGEDQLPMIEQTREIVRRFNHLYAPV 174

Query: 224 LTSPL--------LTTASGT-KMGKTLSGAIWLNKEMTS 253
           L  P         L    G  KM K+L  AI+L+     
Sbjct: 175 LVEPQALVGEVARLPGLDGKAKMSKSLGNAIFLSDSADE 213


>gi|189191994|ref|XP_001932336.1| tyrosyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP]
 gi|187973942|gb|EDU41441.1| tyrosyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP]
          Length = 453

 Score = 57.9 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 44/244 (18%), Positives = 82/244 (33%), Gaps = 31/244 (12%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQ-GVVTAYIGYDLTASSLHAGHLTQLML 59
           M   K +   +L          NP  +D    + G +  Y G   T    H G+   ++ 
Sbjct: 57  MALIKVNLAEVL----------NPEIMDEALKKKGHLKVYWGTATTGRP-HCGYFVPILK 105

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT- 118
           L      G     L+      + +             + ++   E  +   ++ +K    
Sbjct: 106 LAQFLAAGCHVKILLADIHGFLDNLKA--------PIELVKFRAEYYRFTITALLKAVKV 157

Query: 119 --GKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNY 176
              K + ++ ++   L +   +DLLR            +   V  +      LS L   Y
Sbjct: 158 PIDKLEFVLGSSYE-LNADYTMDLLRLASITSEAAAKKAGAEVVKQ-TENAPLSGL--IY 213

Query: 177 MILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTK 236
            ++QA D   L    D  +Q GG DQ        D+  ++   +   L +P++    G K
Sbjct: 214 PLMQALDEQYL----DVDVQFGGVDQRKIFALAKDVLPKIGYKERAHLMNPMVPGLQGGK 269

Query: 237 MGKT 240
           M  +
Sbjct: 270 MSAS 273


>gi|145527933|ref|XP_001449766.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124417355|emb|CAK82369.1| unnamed protein product [Paramecium tetraurelia]
          Length = 156

 Score = 57.9 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 29/136 (21%), Positives = 53/136 (38%), Gaps = 7/136 (5%)

Query: 36  VTAYIGYDLTASSLHAGHLTQLMLL-FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMM 94
           V+ Y G++ T  S   G+   ++ L    Q    +PI+++G  T  +G PSF+ +  +  
Sbjct: 16  VSVYCGFNPTGHSFLLGNFVSILNLEKLAQLDFFQPIAIVGYATIQLGYPSFKMKQSKRS 75

Query: 95  RSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYI---DLLREIGSFFSVN 151
               IQEN     GI         G    +   N  +   I +      L ++ S F + 
Sbjct: 76  DLIAIQENFYTKIGINQDARI---GILQIMGQWNNHYQSRIPWFFRDGKLIDLVSIFRMI 132

Query: 152 RMLSFESVRSRLKREQ 167
            +L+ + +        
Sbjct: 133 SLLNKDHIFKGFNNGD 148


>gi|85859157|ref|YP_461359.1| tryptophanyl-tRNA synthetase [Syntrophus aciditrophicus SB]
 gi|85722248|gb|ABC77191.1| tryptophanyl-tRNA synthetase [Syntrophus aciditrophicus SB]
          Length = 341

 Score = 57.9 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 60/318 (18%), Positives = 104/318 (32%), Gaps = 48/318 (15%)

Query: 29  ILCSQGVVTAY---IGYDLTASSLHAGHLT-QLMLLFWLQKTGHKPIS-LMGGGTSIIGD 83
            +   G++TA     G   T   LH G+L   L     LQ  G       +    ++  D
Sbjct: 6   KIFQGGILTAKRILSGMRPTGK-LHLGNLHGALKNWVDLQNQGTYECFYFVADWHALTSD 64

Query: 84  PSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLRE 143
            S  D  R  +    I      +    S+       +  A +         +  I  L  
Sbjct: 65  YSSTDSIRENIIDMVIDWLSVGLDPRKSTLFVQSKIREHAEL------FLLLSMITPLAW 118

Query: 144 IGSFFSVNRMLSFESVRSRLKREQSLSFLEFN-YMILQAYDFVELAKNYDCRLQMGGSDQ 202
           +    +   M   E + +R      LS   F  Y +LQA D + + K +   +   G DQ
Sbjct: 119 LERNPTYKEM--KEELTNR-----DLSTFGFLGYPVLQAAD-IIMYKAHGVPV---GVDQ 167

Query: 203 WGNIICGIDLGERLKT--PKLFALTSPLLT------TASGTKMGKTLSGAIWLNK--EMT 252
             ++    ++  R      ++F +  PLLT         G KM K+   +I+++   +  
Sbjct: 168 LPHVELTREITRRFNFLYREIFPIPEPLLTNVPKLLGIDGRKMSKSYDNSIFISDRGDAL 227

Query: 253 SPYNFWQYW----RNIDDADVVSFAKRLTTLPM-------SEIDRMAKLQGKEINEAKKI 301
           +      +         D          +   +        EI+   +  G    E KK 
Sbjct: 228 NRKIMAMFTDPQRMRKTDPGRPELCNVFSFHGLYSEEAAVGEIEVECRRAGIGCIECKKR 287

Query: 302 IATEIT---TMVHGREEA 316
           +A  I      VH R++ 
Sbjct: 288 LAARIAGELKTVHERQDY 305


>gi|294102083|ref|YP_003553941.1| tryptophanyl-tRNA synthetase [Aminobacterium colombiense DSM 12261]
 gi|293617063|gb|ADE57217.1| tryptophanyl-tRNA synthetase [Aminobacterium colombiense DSM 12261]
          Length = 331

 Score = 57.9 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 38/238 (15%), Positives = 79/238 (33%), Gaps = 32/238 (13%)

Query: 37  TAYIGYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMR 95
             + G   T   LH GHL   L     LQ        ++    +++ D +     R+   
Sbjct: 4   RVFSGMRPTGK-LHLGHLAGALTNWVRLQNEYECLYCIV-DWHALMSDYADSSRIRK-NC 60

Query: 96  SQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIK-YIDLLREIGSFFSVNRML 154
            + + + +                K+   + ++      +   + ++  +G  +      
Sbjct: 61  KEVLLDWLAAG---------LDPEKSTIFVQSHVPQHAELHLALSMITPLG--WLQRNPT 109

Query: 155 SFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
             E + + ++ +   ++    Y +L A D + L K     +   G DQ  ++    +L  
Sbjct: 110 YKEQILN-IQNKDLGTYAFLGYPVLMASDIL-LYKAEMVPV---GEDQSAHLEISRELAR 164

Query: 215 RLKT-------PKLFALT-SPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNI 264
           R               LT +P +    G KM K+   +I +     SP   W   R +
Sbjct: 165 RFNNFYGEILPEPQMLLTPTPKVPGTDGRKMSKSYGNSIDI---ADSPEEMWNKIRTM 219


>gi|169600493|ref|XP_001793669.1| hypothetical protein SNOG_03082 [Phaeosphaeria nodorum SN15]
 gi|111068693|gb|EAT89813.1| hypothetical protein SNOG_03082 [Phaeosphaeria nodorum SN15]
          Length = 449

 Score = 57.9 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 42/244 (17%), Positives = 79/244 (32%), Gaps = 31/244 (12%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQ-GVVTAYIGYDLTASSLHAGHLTQLML 59
           M   K +   +L          NP  ++    + G +  Y G   T    H G+   ++ 
Sbjct: 51  MALIKVNLQEVL----------NPEIMEEALKKNGHLKVYWGTATTGRP-HCGYFVPILK 99

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK--YG 117
           +      G     L+      + +             + ++   E  +    + +K    
Sbjct: 100 IAQFLSAGCHVKVLLADIHGFLDNLKA--------PIELVKYRAEYYRYTIRALLKAVNV 151

Query: 118 TGKTDALMLNNETWLCSIKYIDLLREIGSFF-SVNRMLSFESVRSRLKREQSLSFLEFNY 176
             +    +L +   L     +D+LR   +      +    E V+        LS L   Y
Sbjct: 152 PIEKLEFVLGSSFELSPDYMMDMLRLASTTSERDAKKAGAEVVKQ--TENAPLSGL--LY 207

Query: 177 MILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTK 236
            ++QA D   L    D  +Q GG DQ        +   +L   +   L +P++    G K
Sbjct: 208 PLMQALDEQYL----DVDVQFGGVDQRKIFALAKEALPKLGYKERAHLMNPMVPGLQGGK 263

Query: 237 MGKT 240
           M  +
Sbjct: 264 MSAS 267


>gi|302343457|ref|YP_003807986.1| tryptophanyl-tRNA synthetase [Desulfarculus baarsii DSM 2075]
 gi|301640070|gb|ADK85392.1| tryptophanyl-tRNA synthetase [Desulfarculus baarsii DSM 2075]
          Length = 321

 Score = 57.9 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 47/305 (15%), Positives = 92/305 (30%), Gaps = 46/305 (15%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTS--IIGDPSFRDESRRMMRSQE 98
           G   + + LH G+   +M      +  H     +    +   +G+P  +     +  + +
Sbjct: 6   GVQPSGT-LHIGNYFAMMKRMIQYQNEHTLFCFIVNYHALTTVGEPD-KLRQGALNAAMD 63

Query: 99  IQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
                                K    M ++   +C + +I           V  +    S
Sbjct: 64  FLALG------------LDPAKCYFWMQSDIPEVCELTWILF-----QQTPVGLLERAHS 106

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
            + +L +  S     FNY +L A D + + ++    +   G DQ  +I    D+  +   
Sbjct: 107 YKDKLAKGFSPQAGLFNYPVLMAADIL-MFQSEAVPV---GKDQKQHIEITRDIAIKFNN 162

Query: 219 PKLFALTSP---------LLTTASGTKMGKTLSGA--IWLNKEMTSPYNFWQYWRNID-- 265
                 T P          +    G KM K+      I+L ++            +    
Sbjct: 163 QYGEVFTLPEPWIDDDTATVPGIDGQKMSKSYDNTLEIFLPEKQLRKKIMSIVTDSTPVE 222

Query: 266 ---DAD---VVSFAKRL-TTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEK 318
              D +   V        T     E+ +  +  G    + KK +  E           ++
Sbjct: 223 APKDPEKCNVYKLISLFMTAAEREELAQRYRAGGLGYGQVKKEL-FERMWAYFAPYRDKR 281

Query: 319 AATAA 323
           AA AA
Sbjct: 282 AALAA 286


>gi|217076652|ref|YP_002334368.1| tryptophanyl-tRNA synthetase [Thermosipho africanus TCF52B]
 gi|217036505|gb|ACJ75027.1| tryptophanyl-tRNA synthetase [Thermosipho africanus TCF52B]
          Length = 331

 Score = 57.9 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 47/233 (20%), Positives = 79/233 (33%), Gaps = 38/233 (16%)

Query: 41  GYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           G   T   LH GHL   L     LQ+ GH+    +    ++    +           + +
Sbjct: 6   GMRPTGK-LHIGHLFGALSSWVELQEKGHECFYFVADWHALTTHYND--------TKEIV 56

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSF--- 156
             +IE +K   +  I     K+   +         IK    L  + S F     L     
Sbjct: 57  NNSIELVKSYLAVGID--PNKSTIFIQ------SEIKEHAELTLLFSMFVSVSRLERVPT 108

Query: 157 -ESVRSRLKREQSLSFLEFN-YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
            + ++ +L  ++ LS   F  Y +LQA D + + +     +   G DQ  +I    ++  
Sbjct: 109 YKEIKQQL-SDKDLSNAGFLIYPVLQAADIL-IYRATGVPV---GEDQVYHIELTREIAR 163

Query: 215 RLK--------TPKLFALTSPLLTTASGTKMGKTLSGAIWL--NKEMTSPYNF 257
           R           P+      P L    G KM K+    I L  ++E       
Sbjct: 164 RFNYLYKEVFPEPEPILSKVPKLLGTDGRKMSKSYGNTIPLVADEETLKKMVM 216


>gi|150020223|ref|YP_001305577.1| tryptophanyl-tRNA synthetase [Thermosipho melanesiensis BI429]
 gi|149792744|gb|ABR30192.1| tryptophanyl-tRNA synthetase [Thermosipho melanesiensis BI429]
          Length = 331

 Score = 57.9 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 45/230 (19%), Positives = 76/230 (33%), Gaps = 34/230 (14%)

Query: 41  GYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           G   T   LH GHL   L     LQ  GH+    +    ++    +           + +
Sbjct: 6   GMRPTGK-LHIGHLFGALQSWVKLQNEGHECFYFVADWHALTTHYNE--------TDEIV 56

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSF--- 156
           + ++E +K   +  I     K+   +         IK    L  + S F     L     
Sbjct: 57  KNSVELVKSYLAVGID--PEKSTIFIQ------SEIKEHAELTLLFSMFVSVSRLERVPT 108

Query: 157 -ESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER 215
            + ++ +LK +   +     Y +LQA D + +       +   G DQ  +I    ++  R
Sbjct: 109 YKEIKQQLKDKDLSNAGFLIYPVLQASDIL-IYLAEGVPV---GEDQVYHIELTREIARR 164

Query: 216 LK-------TPKLFALTS-PLLTTASGTKMGKTLSGAIWLNKEMTSPYNF 257
                    T     L+  P L    G KM K+    I L  E  +    
Sbjct: 165 FNYLYKEVFTEPQPILSKVPKLLGTDGRKMSKSYGNIIPLITEEENLKKM 214


>gi|170290961|ref|YP_001737777.1| tyrosyl-tRNA synthetase [Candidatus Korarchaeum cryptofilum OPF8]
 gi|170175041|gb|ACB08094.1| tyrosyl-tRNA synthetase [Candidatus Korarchaeum cryptofilum OPF8]
          Length = 378

 Score = 57.9 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 43/225 (19%), Positives = 88/225 (39%), Gaps = 27/225 (12%)

Query: 21  ISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSI 80
           +    E+  L  +G    Y+GY+ +   +H G L  +  L  + + G   I+LM    +I
Sbjct: 23  VMTLDEVKELLGKGG-NVYVGYEPSGP-IHVGTLITVRKLRDMIEAGFHSIALMADIHAI 80

Query: 81  IGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDL 140
           +     +D     +  +      + +      F + G+ + +  +  +   L     +DL
Sbjct: 81  LNLKGPQD-----LIKEVSMTYWKTV------FHELGSKQIEIRLGTDFE-LSEDYVMDL 128

Query: 141 LREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGS 200
           L  +    +  R     ++ +R   +  L      Y ++QA D + L      ++ +GG+
Sbjct: 129 L-TLSQRVTARRAWRAMTMVAR--GKDPLVSH-MVYPLMQALDILYLR----VKIAIGGT 180

Query: 201 DQWGNIICGI-----DLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           DQ             D+  R++     A+ +PLL   +G KM  +
Sbjct: 181 DQRKIHALTREVFSSDIPLRVERYVPTAIHTPLLPGLTGGKMSSS 225


>gi|312214261|emb|CBX94254.1| hypothetical protein [Leptosphaeria maculans]
          Length = 450

 Score = 57.5 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 45/245 (18%), Positives = 84/245 (34%), Gaps = 33/245 (13%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQ-GVVTAYIGYDLTASSLHAGHLTQLML 59
           M   K +   +L          NP  +D    + G +  Y G   T    H G+   ++ 
Sbjct: 53  MALIKVNLAEVL----------NPEIMDEALKKQGHLKVYWGTATTGRP-HCGYFVPILK 101

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT- 118
           +      G     L+      + +             + ++   E  +    + +K    
Sbjct: 102 IAQFLAAGCHVKILLADIHGFLDNLKA--------PIELVKFRAEYYRYTIRALLKAVKV 153

Query: 119 --GKTDALMLNNETWLCSIKYIDLLREIG-SFFSVNRMLSFESVRSRLKREQSLSFLEFN 175
              K + ++ ++   L +   +DLLR    +  S  +    E V+        LS L   
Sbjct: 154 PIDKLEFVLGSSYE-LNADYTMDLLRLASITSESAAKKAGAEVVKQ--TENAPLSGL--I 208

Query: 176 YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT 235
           Y ++QA D   L    D  +Q GG DQ        D+  ++   +   L +P++    G 
Sbjct: 209 YPLMQALDEQYL----DVDVQFGGVDQRKIFALAKDVLPKIGYKERAHLMNPMVPGLQGG 264

Query: 236 KMGKT 240
           KM  +
Sbjct: 265 KMSAS 269


>gi|289548704|ref|YP_003473692.1| tryptophanyl-tRNA synthetase [Thermocrinis albus DSM 14484]
 gi|289182321|gb|ADC89565.1| tryptophanyl-tRNA synthetase [Thermocrinis albus DSM 14484]
          Length = 394

 Score = 57.5 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 54/342 (15%), Positives = 102/342 (29%), Gaps = 87/342 (25%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGG----TSIIGDPSFRDESRRM--- 93
           G   T   LH GH   ++  +   +  H+   ++       T        +D  R++   
Sbjct: 6   GMRPTGK-LHLGHYLGVIKNWISLQKDHETFFMVADWHALTTGYKDTKHIKDNIRQLVID 64

Query: 94  -----MRSQEIQENIEKIKG-IFSSFIKYGTGKTDALMLNNETWLC-----------SIK 136
                +  ++    ++ +       F+ +      + +  N T+              + 
Sbjct: 65  WIALGLDPEKSVLFLQSMVKEHAELFLLFAMITPKSWLEWNPTYKDTKYNLLRIHDLELT 124

Query: 137 YIDLLREIGSFFSVNR----------------------------------MLSFESVRSR 162
           +   LR++   F   +                                  ML   +V  R
Sbjct: 125 FRGGLRDLVKEFLARQPFRVEDTEALEEDLLDVIAQAFVKALFDGKLDKEMLRKLNVSKR 184

Query: 163 -LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--- 218
                 +  FL   Y +LQA D + L K     +   G DQ  +I    ++  R      
Sbjct: 185 EFYEVDTYGFL--GYPVLQAVDIL-LYKAEAVPV---GEDQLPHIELTREIARRFNHLYG 238

Query: 219 ----PKLFALT-SPLLTTASGTKMGKTLSGAIWLN----KEMTSPYNFW---QYWRNID- 265
                    LT +P +    G KM K+   AI+      +      +F+   Q  R  D 
Sbjct: 239 ETFPEPQALLTETPRVPGTDGRKMSKSYGNAIYFADSEEEVKKKVMSFFTDPQKLRKGDP 298

Query: 266 ----DADVVSFAKRLTTLPM-SEIDRMAKLQGKEINEAKKII 302
                  V  + K  T      EI+R  +       + K+++
Sbjct: 299 GRPEICPVFMYHKLFTPHEKVEEIERDCRSGKLGCVDCKRMM 340


>gi|195379256|ref|XP_002048396.1| GJ11372 [Drosophila virilis]
 gi|194155554|gb|EDW70738.1| GJ11372 [Drosophila virilis]
          Length = 691

 Score = 57.5 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 38/223 (17%), Positives = 72/223 (32%), Gaps = 34/223 (15%)

Query: 35  VVTAYIGYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRM 93
               + G   T  SLH G+    +     LQK+       +          S        
Sbjct: 51  PRKIFSGIQPTG-SLHLGNYLGAVRKWTQLQKSRENVTICIVDM------HSITMPHNPP 103

Query: 94  MRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRM 153
           +  + I      +             ++   + +       + +I  L  + +   + ++
Sbjct: 104 LLRENIFTMAATLLACG-----VDPAQSTLFVQSAVMEHSELNWI--LNSLTTMPRLAQL 156

Query: 154 LSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLG 213
             F+  +SR+ R+  L    F Y +LQA D + L K     +   G DQ  +I     L 
Sbjct: 157 PQFKE-KSRMVRDVPLGL--FVYPVLQAAD-IMLYKATHVPV---GIDQLQHIQLAQHLA 209

Query: 214 ERLKT--PKLFALTSPLLTTASG----------TKMGKTLSGA 244
               T   ++F + +P++    G           KM K+    
Sbjct: 210 RNFNTRYGEMFPVCTPMIEENDGSRILSLREPSKKMSKSDQNP 252


>gi|284992779|ref|YP_003411333.1| tryptophanyl-tRNA synthetase [Geodermatophilus obscurus DSM 43160]
 gi|284066024|gb|ADB76962.1| tryptophanyl-tRNA synthetase [Geodermatophilus obscurus DSM 43160]
          Length = 340

 Score = 57.5 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 51/297 (17%), Positives = 92/297 (30%), Gaps = 48/297 (16%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQ--KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQE 98
           G   TA S H G+      L      +  H+    +    +I  D       RR + S  
Sbjct: 12  GIQPTADSFHLGNYLG--ALRQWVALQQDHEAFYCVVDLHAITVDWDPETLRRRTLVSA- 68

Query: 99  IQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
                       +  +  G     + +         ++   ++  +  F   +RM  F+ 
Sbjct: 69  ------------AQLLALGVDPARSTLFVQSHVPEHVQLSWVMESLARFGEASRMTQFKD 116

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
              R +     S   F Y +LQA D + L +     +   G DQ  ++    DL  R   
Sbjct: 117 KSQR-EGAAGTSVALFTYPVLQAADIL-LYQADRVPV---GEDQRQHLELTRDLATRFNN 171

Query: 219 --------PKLF---ALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRN---- 263
                   P+          L   +   KM K+L  A  ++  +  P    +  R+    
Sbjct: 172 RFGTSFRLPEAHIVQGTAKILDLQSPDKKMSKSLPPAGCID-LLDDPKVTGKKIRSAVTD 230

Query: 264 -----IDDAD----VVSFAKRLTTLPMSEI-DRMAKLQGKEINEAKKIIATEITTMV 310
                + D +    V +     + L    + D      G+   + KK +A  +   V
Sbjct: 231 TGREVVADPEGKPGVTNLLTIHSALSGRSVGDLEEHFAGRGYGDLKKELAEVVGDFV 287


>gi|183981210|ref|YP_001849501.1| tryptophanyl-tRNA synthetase TrpS [Mycobacterium marinum M]
 gi|183174536|gb|ACC39646.1| tryptophanyl-tRNA synthetase TrpS [Mycobacterium marinum M]
          Length = 339

 Score = 57.5 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 54/302 (17%), Positives = 99/302 (32%), Gaps = 43/302 (14%)

Query: 34  GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRM 93
           G    + G   T+ SLH G+    +  +   +  H     +    + I  P   +  RR 
Sbjct: 6   GSRRIFSGVQPTSDSLHLGNALGAVTQWVALQDDHDAFFCVVDLHA-ITLPQDPEALRR- 63

Query: 94  MRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRM 153
                      +     + ++  G     A +          +   +L     F   +RM
Sbjct: 64  -----------RTLVTAAQYLALGIDPARATIFVQSHVPAHSQLAWVLGCFTGFGQASRM 112

Query: 154 LSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLG 213
             F+   +R +   S +   F Y +LQA D +     YD  L   G DQ  ++    D+ 
Sbjct: 113 TQFKDKSTR-QGADSATVGLFTYPVLQAADVLA----YDAELVPVGEDQRQHLELARDIA 167

Query: 214 ERLKT--PKLFALTSPLLTTASGT---------KMGKTLSGAIWLNKEMTSPYNFWQYWR 262
           +R     P  F +   L+   +           KM K+ S    L   + +P    +  R
Sbjct: 168 QRFNGRFPDTFVVPDVLIPKITAKIYDLQDPTSKMSKSASTDAGLISLLDAPAVSAKKIR 227

Query: 263 N-IDDAD------------VVSFAKRLTTLPMSEIDR-MAKLQGKEINEAKKIIATEITT 308
           + + D++            V +     + +    ID  +    G+   + KK  A  +  
Sbjct: 228 SAVTDSEREIRYDPEAKPGVSNLLSIQSAVSRVSIDTLVDGYAGRGYGDLKKDTAEAVVA 287

Query: 309 MV 310
            V
Sbjct: 288 YV 289


>gi|89895035|ref|YP_518522.1| tryptophanyl-tRNA synthetase [Desulfitobacterium hafniense Y51]
 gi|89334483|dbj|BAE84078.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 326

 Score = 57.5 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 50/299 (16%), Positives = 92/299 (30%), Gaps = 54/299 (18%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   T  SLH GHL+ +     LQ        ++       G     D    ++  +   
Sbjct: 8   GMRPTG-SLHIGHLSVIQNWAALQSEYQSYYGIVDQHALTTGYEDGLDFG--VLIREIAL 64

Query: 101 ENI------EKIKGIFSSFIK-YGTGKTDALMLNNETWLCS-IKYIDLLREIGSFFSVNR 152
           + +      E+      S IK +        M+   +WL     Y D ++++G       
Sbjct: 65  DWLSVGIDPEQSAIFVQSHIKEHAELHLLLSMITPLSWLERVPTYKDQMQQLGK------ 118

Query: 153 MLSFESVRSRLKREQSLSFLEFN-YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGID 211
                      +  + +S   F  Y +L A D +    +    + +G  DQ  ++    +
Sbjct: 119 -----------EGGKDISTYGFLGYPLLMAADILVYKAD---TVPVG-EDQIPHVELCRE 163

Query: 212 LGERLK--------TPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
           +  R           PK      PLL    G KM K+ +  I L           Q    
Sbjct: 164 IARRFNHLYGQVFPEPKALIGKVPLLPGVDGRKMSKSYNNTISLTASTAEIKEKVQQMVT 223

Query: 264 IDDAD------------VVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMV 310
                            V  F +  T   ++E++   +         K+ +A  +  ++
Sbjct: 224 DPARLRKDDPGHPEVCIVYKFHEVYTP-EVAEVEENCRGGKIGCVACKRHLAENLDKLL 281


>gi|311896078|dbj|BAJ28486.1| putative tryptophanyl-tRNA synthetase [Kitasatospora setae KM-6054]
          Length = 359

 Score = 57.5 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 53/307 (17%), Positives = 90/307 (29%), Gaps = 50/307 (16%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN 102
            T   LH GH    +     LQ  G + + ++    ++    + RD + R        E+
Sbjct: 42  PTGP-LHLGHYFGTLRSRVELQAQGIELMIVIPDYQAL----TDRDRADRP------DEH 90

Query: 103 IEKIK-GIFSSFIKYGT----GKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFE 157
            E +     ++ +  G       +    LN          +  L  +            +
Sbjct: 91  AENLVLDYLAAGVDPGRATVFTHSAVPALN-------QLMLPFLSLVSVAELSRNPTVKD 143

Query: 158 SVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK 217
            +     R+ ++S L F Y + QA D +    +    L   G DQ  ++     +  R  
Sbjct: 144 EIA--HSRQAAVSGLMFTYPVHQAADILFCKAD----LVPVGQDQLPHLEITRTIARRFN 197

Query: 218 T-------PKLFALT-SPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADV 269
                        L+ +PLL    G KM K+   AI L           +      +  +
Sbjct: 198 DRYAALFPEPQALLSRAPLLLGTDGGKMSKSRGNAITLGASEDETAKLLRGAVTDPERHI 257

Query: 270 VSF----------AKRLTTLPMSEIDRMAKLQGKEINEA-KKIIATEITTMVHGREEAEK 318
             +             LT L           +      A  K  ATE          A +
Sbjct: 258 -RYDPEHRPGVSNLLLLTALCQDRDPHAVAEEIGSGGAALLKRTATEAVNEYFRPLRARR 316

Query: 319 AATAAME 325
           A  AA  
Sbjct: 317 AELAADR 323


>gi|194871697|ref|XP_001972889.1| GG13636 [Drosophila erecta]
 gi|190654672|gb|EDV51915.1| GG13636 [Drosophila erecta]
          Length = 662

 Score = 57.5 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 43/259 (16%), Positives = 77/259 (29%), Gaps = 42/259 (16%)

Query: 22  SNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSII 81
           +     +   S+     + G   T  SLH G+    +   W+Q    +        T  I
Sbjct: 64  TGESGYEDHNSRWPRKIFSGIQPTG-SLHLGNYLGAVR-KWVQLQNAR-----DDVTVCI 116

Query: 82  GD-PSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDL 140
            D  S        +  + I      +             K+   + +         + + 
Sbjct: 117 VDLHSITMPHNPPLLRENIFTMAATLLACG-----IDPTKSTLFVQS-----AVAAHAEF 166

Query: 141 LREIGSFFSVNRMLSFESV--RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMG 198
              + S  ++ R+        +SRL ++  L    + Y +LQA D + L K     +   
Sbjct: 167 NWILSSMTTMPRLAQLPQFREKSRLLKDVPLGL--YVYPVLQAAD-IMLYKATHVPV--- 220

Query: 199 GSDQWGNIICGIDLGERLKTPKLFALTSPLLT--TASG------------TKMGKTLSGA 244
           G+DQ  +I     L         +  T P+ T     G             KM K+ +  
Sbjct: 221 GADQIQHIQLAQHLARTYNGR--YGETFPVCTAIIEDGDASRVLSLRDPSKKMSKSEANP 278

Query: 245 IWLNKEMTSPYNFWQYWRN 263
                   SP    Q  + 
Sbjct: 279 KATINLCDSPDLITQKIKK 297


>gi|254578852|ref|XP_002495412.1| ZYRO0B10648p [Zygosaccharomyces rouxii]
 gi|238938302|emb|CAR26479.1| ZYRO0B10648p [Zygosaccharomyces rouxii]
          Length = 400

 Score = 57.5 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 41/233 (17%), Positives = 76/233 (32%), Gaps = 23/233 (9%)

Query: 18  IHQISNPRELDILCSQG--VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMG 75
           + ++ NP+ +  +  +    +  Y G   T    H G+   +  L    K G + + LM 
Sbjct: 18  LQEVLNPQIIKDVLEKENRPLKLYWGSAPTGKP-HCGYFVPMTKLADFLKAGCEVVILMA 76

Query: 76  GGTSII---GDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL 132
              + +     P      R       ++  +  I       +K+ TG +          L
Sbjct: 77  DLHAFLDNMKAPLEVVNYRAKYYEFTVKAILRSIDVPIEK-LKFITGSSYQ--------L 127

Query: 133 CSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYD 192
                +D+ R        +   +   V  ++            Y ++QA D   L    D
Sbjct: 128 KPDYTLDIFRLANKVSQNDAKRAGADVVKQVANPL---LSGLIYPLMQALDEQYL----D 180

Query: 193 CRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGA 244
              Q GGSDQ    +   +    L   K   L +P++     G KM  +   +
Sbjct: 181 VDCQFGGSDQRKIFVLAEETLGSLGYKKRAHLMNPMVPGLTQGGKMSASDPNS 233


>gi|295396426|ref|ZP_06806588.1| tryptophan--tRNA ligase [Brevibacterium mcbrellneri ATCC 49030]
 gi|294970728|gb|EFG46641.1| tryptophan--tRNA ligase [Brevibacterium mcbrellneri ATCC 49030]
          Length = 337

 Score = 57.1 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 49/289 (16%), Positives = 92/289 (31%), Gaps = 45/289 (15%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   T+ SLH G+    +  F  Q+  H     +    +I                +E++
Sbjct: 17  GVQATSGSLHLGNYIGALQQFVAQQETHDAFFFIANMHAIT----------VEQNPEELR 66

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           E   +    F +       K+   + ++      + +I  L    S     RM      +
Sbjct: 67  ERTLRTAAQFIAAG-LDPEKSTIFVQSHVDAHTKLSWI--LECTTSLGEAQRMTQ---FK 120

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT-- 218
            +  + + +S     Y  L A D +     Y   +   G DQ  ++    +L ER     
Sbjct: 121 DKSAKNEHVSLGLLTYPALMAADILL----YQADVVPVGEDQRQHLELTRNLAERFNNRY 176

Query: 219 ------PKLFAL--TSPLLTTAS-GTKMGKTLSGAIWLNKEMTSPYNFWQYWRN-IDDAD 268
                 P+   L  T+ +        KM K+          +  P    + +++ + D D
Sbjct: 177 GETFKVPEAGILKQTAKIYDLQDPSAKMSKSGKNPAGRIDILDEPKVLQKKFKSAVTDND 236

Query: 269 ------------VVSFAKRLTTLPMSEIDRM-AKLQGKEINEAKKIIAT 304
                       V +     ++L    ID + A+  GK     K  +A 
Sbjct: 237 TVIAYDPDNKPGVSNLLTIYSSLSGQSIDSIVAEFDGKMYGHLKVALAD 285


>gi|332671379|ref|YP_004454387.1| tryptophanyl-tRNA synthetase [Cellulomonas fimi ATCC 484]
 gi|332340417|gb|AEE47000.1| tryptophanyl-tRNA synthetase [Cellulomonas fimi ATCC 484]
          Length = 354

 Score = 57.1 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 67/363 (18%), Positives = 119/363 (32%), Gaps = 67/363 (18%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSF---RDESRRMMRSQ 97
           G   T+ SL  G+    +  +   +  H  I  +    ++  +P     RD +RR   +Q
Sbjct: 11  GMQPTSDSLQLGNYLGALTQWVALQDEHDAIYCVVDLHALTVNPDPAVLRDRTRRT-AAQ 69

Query: 98  EIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFE 157
            +   ++  + I             A +L+ +T                     RM  F+
Sbjct: 70  FLAAGVDPARSILFVQSHVPEHAELAWLLSCQTGFGE---------------AGRMTQFK 114

Query: 158 SVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK 217
             +S  +  +  +   F Y +L A D +     YD  L   G DQ  ++    DL +RL 
Sbjct: 115 D-KSSKQGSEGTTVGLFTYPVLMAADILL----YDTNLVPVGEDQRQHLELSRDLAQRLN 169

Query: 218 T-----------PKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRN-I 264
                       P +   T+ +      T KM K+      L + +  P    +  R+ +
Sbjct: 170 QRFGPGTAVVPDPHIVKATAKIYDLQDPTSKMSKSAESPNGLIELLDDPKVVAKRIRSAV 229

Query: 265 DDAD---------------VVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT-- 307
            DA+               +++    LT  P+  I  +A   GK   + KK +A  +   
Sbjct: 230 TDAEREIRFDPAAKPGISNLLTIYSALTGRPVDAI--VADYDGKGYGDLKKDLAEVVVGF 287

Query: 308 -----TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVS----RGM--GLLTLI 356
                  VHG      +    +        +   PT+    D       RG     +  +
Sbjct: 288 LAPFQERVHGYLADPASLDEVLADGADRAQALAAPTLERLYDRFGLLRRRGARHAAVDAL 347

Query: 357 VKA 359
           V A
Sbjct: 348 VDA 350


>gi|300709060|ref|XP_002996698.1| hypothetical protein NCER_100158 [Nosema ceranae BRL01]
 gi|263511694|sp|C4V6W1|SYYC_NOSCE RecName: Full=Probable tyrosyl-tRNA synthetase, cytoplasmic;
           AltName: Full=Tyrosyl--tRNA ligase; Short=TyrRS
 gi|239606019|gb|EEQ83027.1| hypothetical protein NCER_100158 [Nosema ceranae BRL01]
          Length = 329

 Score = 57.1 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 38/233 (16%), Positives = 77/233 (33%), Gaps = 23/233 (9%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R    ++     ++ + ++  +  Y G   T    H  +   ++ +      G    
Sbjct: 9   LINRNL-KEVIGGDIMEKIINKRDLNVYWGTATTGKP-HIAYFLPILKIKDFVDAGCNVT 66

Query: 72  SLMGGGTSII---GDPSFRDESRRMMRSQEIQENIEKIKGIFSSF-IKYGTGKTDALMLN 127
            L+    + +     P  + E R     + I   ++ IK   S     +G+         
Sbjct: 67  ILLADIHAFLDNLKAPIEKIECRSQYYKKIITLMLKSIKVDVSKISFIFGSEYQK----- 121

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
                 +  + D+LR +      +   +   V  ++K  +        Y  +QA D   L
Sbjct: 122 -----SNKYFTDILRILNQTKKNDARRAGSEVVKQVKNSK---LSSLVYPAMQALDEEYL 173

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
                  +Q GG DQ    +   +    LK  K   L +P++   +  KM  +
Sbjct: 174 N----VDVQFGGIDQRKIFMYAREFLPLLKYKKRIHLMNPMIPGLNSDKMSSS 222


>gi|218783043|ref|YP_002434361.1| tryptophanyl-tRNA synthetase [Desulfatibacillum alkenivorans AK-01]
 gi|218764427|gb|ACL06893.1| Tryptophanyl-tRNA synthetase [Desulfatibacillum alkenivorans AK-01]
          Length = 327

 Score = 57.1 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 51/293 (17%), Positives = 96/293 (32%), Gaps = 42/293 (14%)

Query: 41  GYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           G   T   LH GHL   L     +Q   +     +    ++  +      +        I
Sbjct: 9   GMRPTGP-LHLGHLHGALANWKDMQD-KYDCFYFIADWHALTTNYEDTSNTAAFRTEMMI 66

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
                 +    S+F      K  A +    + +  + +++  R       + +M + +  
Sbjct: 67  DWLSVGLDPAKSTFFVQSEVKEHAELFLILSMITPVPWLE--RNPTYKDQIVQMENKD-- 122

Query: 160 RSRLKREQSLSFLEFN-YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK- 217
                    LS   F  Y +LQA D + + K +   +   G DQ  ++    ++  R   
Sbjct: 123 ---------LSTFGFLGYPVLQAAD-IIMYKAHGVPV---GIDQVPHVELTREIVRRFNY 169

Query: 218 -------TPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM-----------TSPYNFWQ 259
                   PK     +P L  +   KM K+   AI L               T P    +
Sbjct: 170 MYGDVFVEPKAILTETPKLLGSDNRKMSKSYQNAINLADPPDVVSQKVSVMITDPQRMRK 229

Query: 260 YWRNIDD-ADVVSFAKRLTTLPM-SEIDRMAKLQGKEINEAKKIIATEITTMV 310
                 D  +V SF K  +   M  ++++  +       + KK++A  +T  +
Sbjct: 230 KDPGDPDICNVYSFHKIYSPPEMVEQVNKECRAAEIGCVQCKKLMAANLTAQL 282


>gi|118617112|ref|YP_905444.1| tryptophanyl-tRNA synthetase [Mycobacterium ulcerans Agy99]
 gi|118569222|gb|ABL03973.1| tryptophanyl-tRNA synthetase TrpS [Mycobacterium ulcerans Agy99]
          Length = 339

 Score = 57.1 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 46/247 (18%), Positives = 84/247 (34%), Gaps = 30/247 (12%)

Query: 34  GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRM 93
           G    + G   T+ SLH G+    +  +   +  H     +    + I  P   +  RR 
Sbjct: 6   GSRRIFSGVQPTSDSLHLGNALGAVTQWVALQDDHDAFFCVVDLHA-ITLPQDPEALRR- 63

Query: 94  MRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRM 153
                      +     + ++  G     A +          +   +L     F   +RM
Sbjct: 64  -----------RTLVTAAQYLALGIDPARATIFVQSHVPAHSQLAWVLGCFTGFGQASRM 112

Query: 154 LSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLG 213
             F+   +R +   S +   F Y +LQA D +     YD  L   G DQ  ++    D+ 
Sbjct: 113 TQFKDKSTR-QGADSATVGLFTYPVLQAADVLA----YDAELVPVGEDQRQHLELARDIA 167

Query: 214 ERLKT--PKLFALTSPLLTTASGT---------KMGKTLSGAIWLNKEMTSPYNFWQYWR 262
           +R     P  F +   L+   +           KM K+ S    L   + +P    +  R
Sbjct: 168 QRFNGRFPDTFVVPDVLIPKITAKIYDLQDPTSKMSKSASTDAGLISLLDAPAVSAKKIR 227

Query: 263 N-IDDAD 268
           + + D++
Sbjct: 228 SAVTDSE 234


>gi|320335239|ref|YP_004171950.1| tryptophanyl-tRNA synthetase [Deinococcus maricopensis DSM 21211]
 gi|319756528|gb|ADV68285.1| tryptophanyl-tRNA synthetase [Deinococcus maricopensis DSM 21211]
          Length = 349

 Score = 57.1 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 39/216 (18%), Positives = 67/216 (31%), Gaps = 28/216 (12%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN 102
            TA  LH GH    +     LQ+  +    L+    ++       +  R  +    +   
Sbjct: 11  PTAP-LHIGHYVGSLQSRVRLQRE-YDTFILIADVQALTDTFEHPERVRANVLQVALDYL 68

Query: 103 IEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR 162
              +     +F+        A +      +  +  + +     S    N  +  E  +  
Sbjct: 69  AVGLDPQACTFVVQSMVPEIAELT-----VLYLNLVTV-----SHLRQNPTVKHEIAQKG 118

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL------ 216
                   F  F Y + QA D       +   L   G DQ   I    ++  R       
Sbjct: 119 FGENVPAGF--FVYPVSQAADITA----FGAHLVPVGDDQLPMIEQTNEIVRRFNRLYAP 172

Query: 217 ---KTPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
              +T  L   T+ L  T    KM K+L  AI+L+ 
Sbjct: 173 VLTETKALVGETARLPGTDGRAKMSKSLGNAIFLSD 208


>gi|258652004|ref|YP_003201160.1| tryptophanyl-tRNA synthetase [Nakamurella multipartita DSM 44233]
 gi|258555229|gb|ACV78171.1| tryptophanyl-tRNA synthetase [Nakamurella multipartita DSM 44233]
          Length = 351

 Score = 57.1 bits (137), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 48/245 (19%), Positives = 72/245 (29%), Gaps = 39/245 (15%)

Query: 24  PRELDILCSQGVVTAYI--GYDLTASSLHAGHLTQ-LMLLFWLQKTGHKPISLMGGG--- 77
           P  L+    +   T  +  G   T + LH GH    L     LQ  G   + ++      
Sbjct: 14  PEPLEQRIRRHPHTFRVLSGDRPTGA-LHLGHYLGTLRNRVQLQNLGVPVVVVIADYQVI 72

Query: 78  TSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKY 137
           T        RD  R +          E +              +    LN          
Sbjct: 73  TDRSDLGPVRDRVRTL--------VAEYLAAGLDPARSVIFPHSAVAALN-------QLM 117

Query: 138 IDLLREIG-SFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQ 196
           +  L  +  +    N  +  E++ SR    + L  L   Y + QA D + +         
Sbjct: 118 LPFLSLVTDAELRRNPTVKAEALASR----RPLGGLLLTYPVHQAADILGVGGTVV---- 169

Query: 197 MGGSDQWGNIICGIDLGERLKT--PKLFALTSPLL------TTASGTKMGKTLSGAIWLN 248
             G DQ  ++     +  R       +FAL  PLL          G KM KT    I L 
Sbjct: 170 PVGRDQLPHLELTRVIARRFNERYGPVFALPEPLLSGTPNLLGTDGAKMSKTRGNTIALG 229

Query: 249 KEMTS 253
                
Sbjct: 230 DTADR 234


>gi|296168847|ref|ZP_06850519.1| tryptophan--tRNA ligase [Mycobacterium parascrofulaceum ATCC
           BAA-614]
 gi|295896464|gb|EFG76114.1| tryptophan--tRNA ligase [Mycobacterium parascrofulaceum ATCC
           BAA-614]
          Length = 339

 Score = 56.7 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 46/249 (18%), Positives = 87/249 (34%), Gaps = 30/249 (12%)

Query: 32  SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESR 91
           + G    + G   T+ SLH G+    +  +   +  H+P   +    + I  P      R
Sbjct: 4   ATGSRRIFSGVQPTSDSLHLGNALGAITQWVELQDDHEPFFCVVDLHA-ITIPQDPAALR 62

Query: 92  RMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVN 151
           R    + +    + +             ++     +   W        +L     F   +
Sbjct: 63  R----RTLVTAAQYLALGIDPARSTVFVQSHVPAHSQLAW--------VLGCFTGFGQAS 110

Query: 152 RMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGID 211
           RM  F+   +R +   S +   F Y +LQA D +     YD  L   G DQ  ++    D
Sbjct: 111 RMTQFKDKSAR-QGGDSTTVGLFTYPVLQAADVLA----YDAELVPVGEDQRQHLELARD 165

Query: 212 LGERLKT--PKLFALTSPLLTTASGT---------KMGKTLSGAIWLNKEMTSPYNFWQY 260
           + +R  +  P  F +   L+  A+           KM K+ +    L   +  P    + 
Sbjct: 166 VAQRFNSRFPDTFVVPDLLIPKATAKIYDLADPTSKMSKSAATDAGLINLLDDPAASAKK 225

Query: 261 WRN-IDDAD 268
            R+ + D++
Sbjct: 226 IRSAVTDSE 234


>gi|75992970|gb|ABA33688.1| TyrS-like protein [Haemophilus parasuis]
          Length = 53

 Score = 56.7 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 15/58 (25%), Positives = 23/58 (39%), Gaps = 5/58 (8%)

Query: 317 EKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKS 374
           + A    +  F        MP  +         +GL TL+ +AG   ST+EA R  + 
Sbjct: 1   DAAEQEFINRFQKGAMPDEMPEFT-----FEGEIGLATLLKEAGLVPSTSEAIRSAQQ 53


>gi|45184676|ref|NP_982394.1| AAL148Wp [Ashbya gossypii ATCC 10895]
 gi|44980022|gb|AAS50218.1| AAL148Wp [Ashbya gossypii ATCC 10895]
          Length = 404

 Score = 56.7 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 33/235 (14%), Positives = 77/235 (32%), Gaps = 27/235 (11%)

Query: 18  IHQISNPRELDILCSQG--VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMG 75
           + ++ NP+ +  +  +    +  Y G   T    H G+   +  L    + G +   L+ 
Sbjct: 19  LQEVLNPQIIKEVLEEQKRPLRLYWGTAPTGKP-HCGYFVPMTKLAHFLRAGCEVTVLLA 77

Query: 76  GGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK--YGTGKTDALMLNNETWLC 133
              + +   + +         + +   +   + +  + ++      +    ++ +     
Sbjct: 78  DLHAFL--DNMKA------SLEVVNYRVRYYEFVVKAILRSINVPIEKLRFVVGSSYQTS 129

Query: 134 SIKYIDLLREIGSFFSVNRMLSF---ESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           +   +DL R   S             + V+   +    L      Y ++QA D   L   
Sbjct: 130 AAYTMDLFRM--SNVVSQNDAKRAGADVVK---QVSNPL-LSGLLYPLMQALDEEYL--- 180

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTAS-GTKMGKTLSGA 244
                Q GG DQ    +   +    L   K   L +P++   + G KM  +   +
Sbjct: 181 -GVDAQFGGVDQRKIFVLAEENMGSLGYKKRAHLMNPMVPGLTMGGKMSASDPNS 234


>gi|260941618|ref|XP_002614975.1| hypothetical protein CLUG_04990 [Clavispora lusitaniae ATCC 42720]
 gi|238851398|gb|EEQ40862.1| hypothetical protein CLUG_04990 [Clavispora lusitaniae ATCC 42720]
          Length = 391

 Score = 56.7 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 37/246 (15%), Positives = 75/246 (30%), Gaps = 49/246 (19%)

Query: 18  IHQISNPRELDILCSQG--VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMG 75
           + ++ NP+ +  +       +  Y G   T    H G+   ++ L    K G +   L+ 
Sbjct: 14  LQEVLNPQIIKNVLENEKRPLKIYWGTAPTGKP-HCGYFVPMIKLAHFLKAGCEVTVLIA 72

Query: 76  GGTSIIGDPSF----------------RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG 119
              + + +                   +   R +    E    +       S+       
Sbjct: 73  DLHAYLDNMKAPLEVVKYRGIYYERMVKAVLRSINVPIEKLHFVTGSDYQLSADYTMDLF 132

Query: 120 KTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMIL 179
           K    +  N+         D+++++      N +LS                    Y ++
Sbjct: 133 KLSNKVSQND---AKRAGADVVKQVA-----NPLLSG-----------------LIYPLM 167

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTAS-GTKMG 238
           QA D   L    D  +Q GG DQ    +   +    +   K   L +P++     G KM 
Sbjct: 168 QALDEQYL----DVDVQFGGVDQRKIFVLAEEHLPGIGYKKRGHLMNPMVPGLGQGGKMS 223

Query: 239 KTLSGA 244
            +   +
Sbjct: 224 ASDPNS 229


>gi|296113070|ref|YP_003627008.1| tryptophanyl-tRNA synthetase [Moraxella catarrhalis RH4]
 gi|295920764|gb|ADG61115.1| tryptophanyl-tRNA synthetase [Moraxella catarrhalis RH4]
          Length = 353

 Score = 56.7 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 49/295 (16%), Positives = 85/295 (28%), Gaps = 47/295 (15%)

Query: 50  HAGHLTQ-LMLL-----FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
           H G+    +           +         +     II      +  R           +
Sbjct: 19  HLGNYVGSIRPAIAEAHRAFENHDGDAFFFLADYHGIIKCFDPDEIHRS--TRAIAATWL 76

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLL--REIGSFFSVNRMLSFESVRS 161
                         +   +   L    W+ +      L  R      +V+  LS E    
Sbjct: 77  ACGLDPEKVIFYRQSDIPEIPEL---AWILNCSCAKGLMNRAHAYKAAVDMNLSKED--- 130

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP-- 219
               +  +S   F Y +L A D +     +   + +G  DQ  +I    D+         
Sbjct: 131 -TDPDYGISMGLFGYPVLMAADILMFNATH---VPVG-KDQIQHIEMARDIAGSFNFKYK 185

Query: 220 ----KLFALT---SPLLTTASGTKMGKTLSGAIWL--------NKEMTSPYNFWQYWRNI 264
               + FA+    +PLLT   G KM K+    I L        + E        Q   N 
Sbjct: 186 PLFVEPFAVVDENTPLLTGLDGRKMSKSYGNTIPLFGDGNPQIDPEKALKKAVMQIVTNS 245

Query: 265 D------DADVVSFAKRL-TTLPMSEIDRMAKLQGKEI--NEAKKIIATEITTMV 310
                  D +  +  +         EI+ +A    + I   EAK+I+  +I   +
Sbjct: 246 QPPEEPKDPEHCTIFEIYKAFGTPEEIEALATHYRRGIGWGEAKEILFNKINHEI 300


>gi|330799807|ref|XP_003287933.1| tryptophanyl-tRNA synthetase [Dictyostelium purpureum]
 gi|325082067|gb|EGC35562.1| tryptophanyl-tRNA synthetase [Dictyostelium purpureum]
          Length = 400

 Score = 56.7 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 53/338 (15%), Positives = 110/338 (32%), Gaps = 56/338 (16%)

Query: 15  RGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      + +E LD   +      Y G   ++ SLH GHL   +   +LQ   + P+ +
Sbjct: 65  RGIFFSHRDLKEILDHHEAGKKWYLYTGRGPSSGSLHFGHLLPFLFTKYLQDAFNVPLVV 124

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                         ++ + + +   I+E+IE         I  G       + +N  ++ 
Sbjct: 125 -----------QMTNDEKFLWKGITIEESIEYTHNNVKDIIALGFDVQKTFIFSNLDYIQ 173

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY-----DFVELA 188
            +          +   ++R ++   +++    + S +  +F +  +QA       F  + 
Sbjct: 174 YLYP--------NAIKISRCVNLNQIKNIFGFQDSDAVGKFTFPPIQAAPCFPDSFPHIF 225

Query: 189 KNYD-------CRLQMGGSDQWGNIICGIDL-GERLKTPK--LFALTSPLLTTASGTKMG 238
              D       C +     DQ        D+           + +   P L   + TKM 
Sbjct: 226 DPKDPEIKAVRCLIPC-AIDQDPYFRMTRDVAQRLGYNKPSLIHSKFFPALQGHN-TKMS 283

Query: 239 KT-LSGAIWLNKEMTSPYNFWQY----WRNIDDADVVSF---------AKRLTTL----- 279
            + L+ A++L+       +  +            D   +          + LT L     
Sbjct: 284 ASDLNSAVYLSDTPQQVKDKIKKHAFSGGGATKEDQEKYGANLSVDITYEYLTFLLEDDD 343

Query: 280 PMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAE 317
            + EI            E K+I+   +  ++   +EA 
Sbjct: 344 QLKEIAEKYSTGKMLTGEIKQILIDIMVKIIARHKEAR 381


>gi|312879942|ref|ZP_07739742.1| tryptophanyl-tRNA synthetase [Aminomonas paucivorans DSM 12260]
 gi|310783233|gb|EFQ23631.1| tryptophanyl-tRNA synthetase [Aminomonas paucivorans DSM 12260]
          Length = 329

 Score = 56.7 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 51/318 (16%), Positives = 104/318 (32%), Gaps = 53/318 (16%)

Query: 37  TAYIGYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMR 95
             + G   T   LH GH+   L+    LQ   H+    +    +++ D +     R    
Sbjct: 4   RVFSGMRPTGK-LHLGHMAGALINWVKLQD-DHECYYSIVDWHALMSDYADSSRLRD-NC 60

Query: 96  SQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLS 155
            + + + +          +     K    + +       +++ +L   +     +  +  
Sbjct: 61  REILLDWLA---------VGLDPEKCTIFVQS-----HVLQHAELSLALSMVTPLGWLER 106

Query: 156 FESVRSRLKR--EQSLSFLEFN-YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL 212
             + + ++     + LS   F  Y +L A D + L K     +   G DQ  ++    +L
Sbjct: 107 CPTYKEQILNLQNKDLSTYAFLGYPVLMAADIL-LYKAGQVPV---GVDQSAHLELSREL 162

Query: 213 GERLKT-------PKLFALT-SPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNI 264
             R               LT +P +    G KM K+   ++ +  E   P   W+  R +
Sbjct: 163 ARRFNQFFGEVFPEPQALLTPNPKMPGTDGRKMSKSYGNSLNIADE---PKELWEKLRPM 219

Query: 265 ------------DDAD---VVSFAKRLT--TLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
                        D D   V    +          E+++  +  G    + KK +   + 
Sbjct: 220 VTDPARYRRSDPGDPDKCPVWDLHRFFNQDLEERKELEQGCRNAGIGCVDCKKKLFVHVE 279

Query: 308 TMVHGREEAEKAATAAME 325
            M+   +E  +A  A  E
Sbjct: 280 KMMVPIQERRRAFAAREE 297


>gi|326561650|gb|EGE11987.1| tryptophanyl-tRNA synthetase [Moraxella catarrhalis 103P14B1]
 gi|326564221|gb|EGE14457.1| tryptophanyl-tRNA synthetase [Moraxella catarrhalis 12P80B1]
 gi|326565820|gb|EGE15982.1| tryptophanyl-tRNA synthetase [Moraxella catarrhalis BC1]
 gi|326573449|gb|EGE23417.1| tryptophanyl-tRNA synthetase [Moraxella catarrhalis 101P30B1]
 gi|326575654|gb|EGE25577.1| tryptophanyl-tRNA synthetase [Moraxella catarrhalis CO72]
          Length = 353

 Score = 56.4 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 49/295 (16%), Positives = 85/295 (28%), Gaps = 47/295 (15%)

Query: 50  HAGHLTQ-LMLL-----FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
           H G+    +           +         +     II      +  R           +
Sbjct: 19  HLGNYVGSIRPAIAEAHRAFENHDGDAFFFLADYHGIIKCFDPDEIHRS--TRAIAATWL 76

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLL--REIGSFFSVNRMLSFESVRS 161
                         +   +   L    W+ +      L  R      +V+  LS E    
Sbjct: 77  ACGLDPEKVIFYRQSDIPEIPEL---AWILNCSCAKGLMNRAHAYKAAVDMNLSKED--- 130

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP-- 219
               +  +S   F Y +L A D +     +   + +G  DQ  +I    D+         
Sbjct: 131 -TDPDYGISMGLFGYPVLMAADILMFNATH---VPVG-KDQIQHIEMARDIAGSFNFKYK 185

Query: 220 ----KLFALT---SPLLTTASGTKMGKTLSGAIWL--------NKEMTSPYNFWQYWRNI 264
               + FA+    +PLLT   G KM K+    I L        + E        Q   N 
Sbjct: 186 PLFVEPFAVVDENTPLLTGLDGRKMSKSYGNTIPLFGDGNPQIDPEKALKKAVMQIVTNS 245

Query: 265 D------DADVVSFAKRL-TTLPMSEIDRMAKLQGKEI--NEAKKIIATEITTMV 310
                  D +  +  +         EI+ +A    + I   EAK+I+  +I   +
Sbjct: 246 QPPEEPKDPEHCTIFEIYKAFGTPEEIEALATHYRRGIGWGEAKEILFNKINHEI 300


>gi|219669445|ref|YP_002459880.1| tryptophanyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2]
 gi|219539705|gb|ACL21444.1| tryptophanyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2]
          Length = 326

 Score = 56.4 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 50/299 (16%), Positives = 92/299 (30%), Gaps = 54/299 (18%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   T  SLH GHL+ +     LQ        ++       G     D    ++  +   
Sbjct: 8   GMRPTG-SLHIGHLSVIQNWAALQSEYQSYYGIVDQHALTTGYEDGLDFG--VLIREIAL 64

Query: 101 ENI------EKIKGIFSSFIK-YGTGKTDALMLNNETWLCS-IKYIDLLREIGSFFSVNR 152
           + +      E+      S IK +        M+   +WL     Y D ++++G       
Sbjct: 65  DWLSVGIDPEQSAIFVQSHIKEHAELHLLLSMITPLSWLERVPTYKDQMQQLGK------ 118

Query: 153 MLSFESVRSRLKREQSLSFLEFN-YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGID 211
                      +  + +S   F  Y +L A D +    +    + +G  DQ  ++    +
Sbjct: 119 -----------EGGKDISTYGFLGYPLLMAADILVYKAD---TVPVG-EDQIPHVELCRE 163

Query: 212 LGERLK--------TPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
           +  R           PK      PLL    G KM K+ +  I L           Q    
Sbjct: 164 IARRFNHLYGPVFPEPKALIGKVPLLPGVDGRKMSKSYNNTISLTASTAEIKERVQQMVT 223

Query: 264 IDDAD------------VVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMV 310
                            V  F +  T   ++E++   +         K+ +A  +  ++
Sbjct: 224 DPARLRKDDPGHPEVCIVYKFHEVYTP-EVAEVEENCRGGKIGCVACKRHLAENLDKLL 281


>gi|123444741|ref|XP_001311138.1| hypothetical protein [Trichomonas vaginalis G3]
 gi|121892936|gb|EAX98208.1| hypothetical protein TVAG_263250 [Trichomonas vaginalis G3]
          Length = 346

 Score = 56.4 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 45/256 (17%), Positives = 89/256 (34%), Gaps = 26/256 (10%)

Query: 15  RGFIHQISNPRELDILCSQGV-VTAYIGYDLTASSLHAGH-LTQLMLLFWLQKTGHKPIS 72
           R     I     ++ L  +     AY G++ +   +H    L   +    + K G   + 
Sbjct: 14  RSIAEDIQGNERIEELLEKKPNFRAYNGFEPSGR-MHIAQALVTAINCNAITKAGGTMVL 72

Query: 73  LMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL 132
            +    + +      D          +++  +  +     F   G       ++    ++
Sbjct: 73  YIADLFAQLNHKMGGD----------MKKIHDVGRYFVEVFKACGMDLDHVEIIWTADFI 122

Query: 133 CS--IKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
                +Y +L+ +I SF +++R+    +   R      LS  +  Y  +QA D   L  +
Sbjct: 123 KEHQREYFELVHDISSFATLSRIKRTVTAMGR-TEGDKLSLSQLLYPCMQATDVFMLDVD 181

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT--KMGKTLSG-AIWL 247
             C+L   G DQ    +  I+    +K P    L+  +L    G   KM K+    AI++
Sbjct: 182 I-CQL---GVDQRKVNMLAIEYANHVKRPSPIILSHHMLMGLKGKAHKMSKSDPMSAIFI 237

Query: 248 NKEMTSPYNFWQYWRN 263
             E        +   N
Sbjct: 238 EDEKDR---IVEKMMN 250


>gi|50427467|ref|XP_462346.1| DEHA2G18546p [Debaryomyces hansenii CBS767]
 gi|49658016|emb|CAG90853.1| DEHA2G18546p [Debaryomyces hansenii]
          Length = 400

 Score = 56.4 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 30/216 (13%), Positives = 67/216 (31%), Gaps = 19/216 (8%)

Query: 32  SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESR 91
            +  +  Y G   T    H G+   ++ L    K G +   L+    + +      D  +
Sbjct: 34  EKRPLKIYWGTAPTGKP-HCGYFVGMLKLAHFLKAGCEVKVLLADLHAFL------DNMK 86

Query: 92  RMMRSQEIQENIEKIKGIFSSFIK--YGTGKTDALMLNNETWLCSIKYIDLLREIGSFFS 149
             +  + +    +  + +  + +K           ++ +   L +   +D+ R   S   
Sbjct: 87  APL--EVVNYRAKYYECVVKAILKSINVPIDKLIFVVGSSYQLTAEYTMDIFRMSNSVSQ 144

Query: 150 VNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICG 209
            +   +   V  ++            Y ++QA D   L        Q GG DQ    +  
Sbjct: 145 NDAKRAGADVVKQVANPL---LSGLIYPLMQALDEEYL----GVDAQFGGVDQRKIFVLA 197

Query: 210 ID-LGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
            + L       +   +   +     G KM  +   +
Sbjct: 198 EENLQSIGYKKRAHLMNPMVPGLGQGGKMSASDPNS 233


>gi|254466733|ref|ZP_05080144.1| RNA pseudouridine synthase family protein [Rhodobacterales
           bacterium Y4I]
 gi|206687641|gb|EDZ48123.1| RNA pseudouridine synthase family protein [Rhodobacterales
           bacterium Y4I]
          Length = 355

 Score = 56.4 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 13/59 (22%), Positives = 25/59 (42%), Gaps = 1/59 (1%)

Query: 340 SISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
           +I +     G  +  ++ +AG   S  EA R +    + +N   I +  L +  +D  S
Sbjct: 27  AIPEGAAPEGDRIAKVLSRAG-VASRREAERMIAEGRVSVNGKKIDSPALNVTARDRIS 84


>gi|156839892|ref|XP_001643632.1| hypothetical protein Kpol_478p10 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156114251|gb|EDO15774.1| hypothetical protein Kpol_478p10 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 400

 Score = 56.4 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 37/237 (15%), Positives = 78/237 (32%), Gaps = 31/237 (13%)

Query: 18  IHQISNPRELDILCS--QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMG 75
           + ++ NP+ +  +    +  +  Y G   T    H G+   +  L    K G +   L+ 
Sbjct: 18  LQEVLNPQIIKNVLEVEKRPLKLYWGTAPTGRP-HCGYFVPMTKLAHFLKAGCEVTVLLA 76

Query: 76  GGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD--ALMLNNETWLC 133
              + +      D  +  +  + +    +  +    + ++      D    ++ +   L 
Sbjct: 77  DLHAFL------DNMKAPL--EVVNYRAKYYEYTVKAILRSINVPIDKLKFVVGSSYQLS 128

Query: 134 SIKYIDLLREIGSFFSVNRMLSF---ESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           +   +D+ R   S             + V+   +    L      Y ++QA D   L   
Sbjct: 129 AEYTMDIFRM--SNIVSQNDAKRAGADVVK---QVANPL-LSGLIYPLMQALDEQYL--- 179

Query: 191 YDCRLQMGGSDQWGNIICGID-LGERLKTPKLFAL--TSPLLTTASGTKMGKTLSGA 244
            D  +Q GG DQ    +   + L       +   +    P LT   G KM  +   +
Sbjct: 180 -DVDVQFGGVDQRKIFVLAEENLQGLGYKKRAHLMNPMVPGLT--QGGKMSASDPNS 233


>gi|119479191|ref|XP_001259624.1| tyrosyl-tRNA synthetase [Neosartorya fischeri NRRL 181]
 gi|119407778|gb|EAW17727.1| tyrosyl-tRNA synthetase [Neosartorya fischeri NRRL 181]
          Length = 391

 Score = 56.4 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 39/229 (17%), Positives = 77/229 (33%), Gaps = 23/229 (10%)

Query: 18  IHQISNPRELDILCSQGV-VTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGG 76
           + +I NP  ++ + ++G     Y G   T    H G+    + +      G     L+  
Sbjct: 17  LQEILNPDIIEGILAEGRNPKIYWGTSPTGKP-HCGYFVPAVKIAQFLAAGCDVTILIAD 75

Query: 77  GTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK---YGTGKTDALMLNNETWLC 133
               + +             + ++   +  +    + ++     T K   ++ ++     
Sbjct: 76  IHGFLDNLKA--------PIELVEYRAKYYEYTIRAMLQAVGVSTEKLRFVLGSSYQ-KS 126

Query: 134 SIKYIDLLREIGSFFSV-NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYD 192
               +D+ +          +    E V+        LS L   Y ILQ  D   L    D
Sbjct: 127 PEYVMDVYKLCSLVSEHDAKKAGAEVVKQ--SNNSPLSGL--LYPILQVLDEQHL----D 178

Query: 193 CRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
           C +Q GG DQ        +   +L   K   L +P++   +G KM  + 
Sbjct: 179 CDVQFGGVDQRKLFAASTEWQPKLGYRKRAHLLNPMVPGLTGGKMSSSE 227


>gi|1584013|prf||2122232A Tyr-tRNA synthetase
          Length = 370

 Score = 56.4 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 40/246 (16%), Positives = 79/246 (32%), Gaps = 24/246 (9%)

Query: 3   AFKSDFLS---ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLML 59
            F S+ ++    L  RG   ++     L  +  +  +  Y G   T    H G+   ++ 
Sbjct: 2   GFTSEIVNKKYELITRGL-QEVLGAERLRKILEERDLKLYWGTSPTGKP-HCGYFVPMIK 59

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK---Y 116
           +    K   +   L     + + +               ++   +  + I  + +K    
Sbjct: 60  IADFLKAEVEVTILFADIHAFLDNLKA--------PIDIVKYRAKYYEFIIKAILKSIGV 111

Query: 117 GTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNY 176
            T K   ++ ++   L S   +D  R        +   +   V  +++           Y
Sbjct: 112 STEKLRFVLGSSYQ-LSSKYCMDNFRLCTIVTEHDAKKAGAEVVKQVENSL---LSGLLY 167

Query: 177 MILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTK 236
             +QA D   L  +     Q GG DQ             L   K   L SP++   +G K
Sbjct: 168 PGMQALDEEYLDSDA----QFGGVDQRKIFTFAEKYLPMLGLKKRIHLMSPMIPGLAGGK 223

Query: 237 MGKTLS 242
           M  + +
Sbjct: 224 MSASGN 229


>gi|269859348|ref|XP_002649399.1| tyrosyl-tRNA synthetase [Enterocytozoon bieneusi H348]
 gi|263511692|sp|B7XHC1|SYYC_ENTBH RecName: Full=Probable tyrosyl-tRNA synthetase, cytoplasmic;
           AltName: Full=Tyrosyl--tRNA ligase; Short=TyrRS
 gi|220067162|gb|EED44629.1| tyrosyl-tRNA synthetase [Enterocytozoon bieneusi H348]
          Length = 342

 Score = 56.4 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 36/239 (15%), Positives = 71/239 (29%), Gaps = 31/239 (12%)

Query: 11  ILSERGFIHQIS--NPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
            L ER    +I+  +   +  +  +  +  Y G  +T    H G+   ++ +    +   
Sbjct: 19  TLIERNL-QEITINDKEIIRKIIRKRNLKIYWGTAITGKP-HIGYFLPILKIKDFVEAEC 76

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           +   L       + +         +   +      EKI  I    +  G        +  
Sbjct: 77  EVTILFADIHGFLDNLKA-----PIELIENRYHYYEKIIKIM--LMSVGCDINKIRFVKG 129

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFES-------VRSRLKREQSLSFLEFNYMILQA 181
                  K  D + ++    S       +        V+ R     ++      Y  +QA
Sbjct: 130 SD---YQKNSDYVFDLYKLCSYTT--ERDCKRAGSDVVKQR----DNVLLSSLIYPNMQA 180

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
            D   L        Q GG DQ    +       +L   K   L +P++   +  KM  +
Sbjct: 181 LDEEYLK----VDAQFGGEDQRKIFMHAKTFLPKLGYKKRIHLMNPMMPGLNSDKMSSS 235


>gi|121713488|ref|XP_001274355.1| tyrosyl-tRNA synthetase [Aspergillus clavatus NRRL 1]
 gi|119402508|gb|EAW12929.1| tyrosyl-tRNA synthetase [Aspergillus clavatus NRRL 1]
          Length = 385

 Score = 56.4 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 39/229 (17%), Positives = 78/229 (34%), Gaps = 23/229 (10%)

Query: 18  IHQISNPRELDILCSQGV-VTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGG 76
           + ++ N   ++ + ++G     Y G   T    H G+    + +  L   G     L+  
Sbjct: 17  LQEVLNQDLIEGILAEGRNPRIYWGTSPTGKP-HCGYFVPAVKIAQLLAAGCDVTILIAD 75

Query: 77  GTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK---YGTGKTDALMLNNETWLC 133
               + +             + ++   +  +   ++ ++     T K   ++ ++     
Sbjct: 76  IHGFLDNLKA--------PIELVEHRAKYYEYTITAMLQAVGVSTEKLRFVLGSSYQ-KS 126

Query: 134 SIKYIDLLREIGSFFSV-NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYD 192
               +D+ R          +    E V+        LS L   Y ILQ  D   L    D
Sbjct: 127 PDYVMDVYRLCSLVSEHDAKKAGAEVVKQ--TDNSPLSGL--LYPILQVLDEQYL----D 178

Query: 193 CRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
           C +Q GG DQ        +   +L   K   L +P++   +G KM  + 
Sbjct: 179 CDIQFGGIDQRKLFAASTEWQPKLGYRKRAHLMNPMVPGLTGGKMSSSE 227


>gi|145606232|ref|XP_365747.2| hypothetical protein MGG_02449 [Magnaporthe oryzae 70-15]
 gi|145013947|gb|EDJ98588.1| hypothetical protein MGG_02449 [Magnaporthe oryzae 70-15]
          Length = 388

 Score = 56.4 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 42/224 (18%), Positives = 75/224 (33%), Gaps = 21/224 (9%)

Query: 23  NPRELDILCSQGV-VTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSII 81
           N   ++ + +QG     Y G   T    H G+    + +      G +   L+      +
Sbjct: 22  NIEIIEDILAQGRDPKIYWGTATTGRP-HIGYFVPALKIAQFLAAGCELTILLADIHGFL 80

Query: 82  GDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK-YGTGKTDALMLNNETWLCSIKYIDL 140
            +             + +Q   +  + +  S +K  G        +    +     YI  
Sbjct: 81  DNLKA--------PIEIVQYRAQYYQHVIKSILKAVGVPTEKLRFILGSEFQKGPDYIMD 132

Query: 141 LREIGSFFSV--NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMG 198
           + ++ S  S    R    E V+        LS L   Y +LQA D   L     C  Q G
Sbjct: 133 IYKLTSLTSEHDARKAGAEVVKQ--TDNAPLSGL--LYPLLQALDEEYL----GCDAQFG 184

Query: 199 GSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           G+DQ        D+  ++   +   L +P++    G KM  +  
Sbjct: 185 GTDQRKIFTLAKDVLPKIGYKQRAHLMNPMIPGLQGAKMSSSEP 228


>gi|70997685|ref|XP_753580.1| tyrosyl-tRNA synthetase [Aspergillus fumigatus Af293]
 gi|66851216|gb|EAL91542.1| tyrosyl-tRNA synthetase [Aspergillus fumigatus Af293]
 gi|159126689|gb|EDP51805.1| tyrosyl-tRNA synthetase [Aspergillus fumigatus A1163]
          Length = 391

 Score = 56.4 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 39/229 (17%), Positives = 77/229 (33%), Gaps = 23/229 (10%)

Query: 18  IHQISNPRELDILCSQGV-VTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGG 76
           + +I NP  ++ + ++G     Y G   T    H G+    + +      G     L+  
Sbjct: 17  LQEILNPDIIEGILAEGRNPKIYWGTSPTGKP-HCGYFVPAVKIAQFLAAGCDVTILIAD 75

Query: 77  GTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK---YGTGKTDALMLNNETWLC 133
               + +             + ++   +  +    + ++     T K   ++ ++     
Sbjct: 76  IHGFLDNLKA--------PIELVEYRAKYYEYTIRAMLQAVGVSTEKLRFVLGSSYQ-KS 126

Query: 134 SIKYIDLLREIGSFFSV-NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYD 192
               +D+ +          +    E V+        LS L   Y ILQ  D   L    D
Sbjct: 127 PEYVMDVYKLCSLVSEHDAKKAGAEVVKQ--SNNSPLSGL--LYPILQVLDEQHL----D 178

Query: 193 CRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
           C +Q GG DQ        +   +L   K   L +P++   +G KM  + 
Sbjct: 179 CDVQFGGVDQRKLFAASTEWQPKLGYRKRAHLLNPMVPGLTGGKMSSSE 227


>gi|300707212|ref|XP_002995824.1| hypothetical protein NCER_101183 [Nosema ceranae BRL01]
 gi|239605045|gb|EEQ82153.1| hypothetical protein NCER_101183 [Nosema ceranae BRL01]
          Length = 388

 Score = 56.4 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 39/229 (17%), Positives = 69/229 (30%), Gaps = 19/229 (8%)

Query: 15  RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLM 74
           R  +    +   L           Y G   ++ S+H GH+    L  + Q T + P+ + 
Sbjct: 65  RNIVFAHRDFDILLEKLKSKSFYLYTGRGPSSKSMHLGHVIPFQLCKYFQDTFNCPLVI- 123

Query: 75  GGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCS 134
                        D+ + + + Q  +E+ +         I +G       + +N     S
Sbjct: 124 ----------QMTDDEKFLFKDQSFEESTKYCAENIKDIIAFGFNPKLTYIFSNVE--SS 171

Query: 135 IKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYDFVELAKNYDC 193
             +     +I    S+N         +            E       +++F  L K   C
Sbjct: 172 HLFEKNTLKIAKSISLNEACKIFGFDNNSNIGMIGFPAKEIAPCFASSFEF--LNKGAMC 229

Query: 194 RLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT--KMGKT 240
            +     DQ        D    +K PK   L   LL    G   KM  +
Sbjct: 230 LIPC-AVDQDPYFRLARDKASVMKEPKPTTLYVSLLPDLKGVNRKMSAS 277


>gi|332704486|ref|ZP_08424574.1| tryptophanyl-tRNA synthetase [Desulfovibrio africanus str. Walvis
           Bay]
 gi|332554635|gb|EGJ51679.1| tryptophanyl-tRNA synthetase [Desulfovibrio africanus str. Walvis
           Bay]
          Length = 330

 Score = 56.4 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 47/305 (15%), Positives = 92/305 (30%), Gaps = 67/305 (21%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQ-KTGHKPISLMGGGTSIIGDPSFRDESRRMMR--SQ 97
           G   T   LH GH   ++ L WLQ +  H+    +    ++    +  DE R++     +
Sbjct: 11  GMRPTGP-LHLGHYFGVL-LNWLQMQQEHECFYFVADWHALT---TSYDEPRKIKGFVPE 65

Query: 98  EIQENIE-------KIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSV 150
            +++ +         +    S   ++        ML    WL        +RE       
Sbjct: 66  LVKDWLASGLDPERCVIFQQSQIKEHAELHLLLSMLTPVGWLERNPTYKEVRE------- 118

Query: 151 NRMLSFESVRSRLKREQSLSFLEFN-YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICG 209
                        + ++ LS   F  Y +L   D + + K     +   G DQ  ++   
Sbjct: 119 -------------QMQKDLSTYGFLGYPVLMCTD-IIMYKPKWVPV---GQDQLPHLELT 161

Query: 210 IDLGERLKT-------PKLFALTSPL-LTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYW 261
            ++  R               LT    L    G KM K+   AI+L              
Sbjct: 162 REIVRRFNHLYGDYFPEPEAKLTESAKLPGLDGRKMSKSYGNAIYL---KDPMDEIRSKV 218

Query: 262 RNI---------------DDADVVSFAKRLTTLP-MSEIDRMAKLQGKEINEAKKIIATE 305
            ++                D ++  + +       + E+        +   + KK +A  
Sbjct: 219 MSMLTDTKRMRLKDPGNPPDCNLYPYLQLFEKEDYLKEVWDGCINATRGCGDCKKRLAVS 278

Query: 306 ITTMV 310
           +   +
Sbjct: 279 LAEFL 283


>gi|326778256|ref|ZP_08237521.1| tryptophanyl-tRNA synthetase [Streptomyces cf. griseus XylebKG-1]
 gi|326658589|gb|EGE43435.1| tryptophanyl-tRNA synthetase [Streptomyces cf. griseus XylebKG-1]
          Length = 377

 Score = 56.0 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 41/256 (16%), Positives = 77/256 (30%), Gaps = 49/256 (19%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQ-LMLLFWLQKTGHK 69
            L  R  I Q  +P    +L              T   LH GH    L+    LQ  G +
Sbjct: 43  ELERR--IAQ--DPGGFRVLTGDR---------PTGP-LHLGHYFGSLLNRVRLQNLGVE 88

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG----TGKTDALM 125
            + L+                 +++  ++  E + +        + Y           + 
Sbjct: 89  VVVLIPDY--------------QVITDRDTAERLGEYTDGL--LLDYLALGIDPARSTVF 132

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
            ++     +   +  L  +            + +     R+ ++S L   Y + QA D  
Sbjct: 133 CHSAVPALNQLMLPFLSLVSVAELNRNPTVKDEIA--HSRQSTVSGLMLTYPVHQAAD-- 188

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-------TPKLFAL-TSPLLTTASGTKM 237
            L+   +      G DQ  ++     +  R               L  +PLL    GTKM
Sbjct: 189 ILSCKGNVV--PVGRDQAPHLELTRTIARRFNERYGAVFQEPDIMLSAAPLLLGTDGTKM 246

Query: 238 GKTLSGAIWLNKEMTS 253
            K+ + ++ L      
Sbjct: 247 SKSRANSVPLGATADE 262


>gi|182437602|ref|YP_001825321.1| putative tryptophanyl-tRNA synthetase [Streptomyces griseus subsp.
           griseus NBRC 13350]
 gi|178466118|dbj|BAG20638.1| putative tryptophanyl-tRNA synthetase [Streptomyces griseus subsp.
           griseus NBRC 13350]
          Length = 372

 Score = 56.0 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 41/256 (16%), Positives = 77/256 (30%), Gaps = 49/256 (19%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQ-LMLLFWLQKTGHK 69
            L  R  I Q  +P    +L              T   LH GH    L+    LQ  G +
Sbjct: 38  ELERR--IAQ--DPGGFRVLTGDR---------PTGP-LHLGHYFGSLLNRVRLQNLGVE 83

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG----TGKTDALM 125
            + L+                 +++  ++  E + +        + Y           + 
Sbjct: 84  VVVLIPDY--------------QVITDRDTAERLGEYTDGL--LLDYLALGIDPARSTVF 127

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
            ++     +   +  L  +            + +     R+ ++S L   Y + QA D  
Sbjct: 128 CHSAVPALNQLMLPFLSLVSVAELNRNPTVKDEIA--HSRQSTVSGLMLTYPVHQAAD-- 183

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-------TPKLFAL-TSPLLTTASGTKM 237
            L+   +      G DQ  ++     +  R               L  +PLL    GTKM
Sbjct: 184 ILSCKGNVV--PVGRDQAPHLELTRTIARRFNERYGAVFQEPDIMLSAAPLLLGTDGTKM 241

Query: 238 GKTLSGAIWLNKEMTS 253
            K+ + ++ L      
Sbjct: 242 SKSRANSVPLGATADE 257


>gi|330465686|ref|YP_004403429.1| tryptophanyl-tRNA synthetase [Verrucosispora maris AB-18-032]
 gi|328808657|gb|AEB42829.1| tryptophanyl-tRNA synthetase [Verrucosispora maris AB-18-032]
          Length = 341

 Score = 56.0 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 52/301 (17%), Positives = 98/301 (32%), Gaps = 47/301 (15%)

Query: 37  TAYIGYDLTASSLHAGHLTQLMLLFWLQ--KTGHKPISLMGGGTSIIGDPSFRDESRRMM 94
             + G   TA S H G+      +      +  H  +  +    +I      +       
Sbjct: 9   RVFSGIQPTADSFHLGNYLG--AVRHWVALQESHDAVYCVVDLHAITAGHDPK------- 59

Query: 95  RSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRML 154
               +     ++    +  +  G       +          +   +L  +  F   +RM 
Sbjct: 60  ----VLHQRSRVAA--AQLLAVGLDPERCTLFVQSQVPEHAQLAWVLGCLTGFGEASRMT 113

Query: 155 SFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
            F+  +S+ +  +  S   F Y ILQA D + L +     +   G DQ  ++    DL +
Sbjct: 114 QFKD-KSQKQGNERASVGLFTYPILQAADIL-LYQANAVPV---GEDQRQHLELSRDLAQ 168

Query: 215 RLKT--PKLFALTSPLLTTASGT---------KMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
           R  T     F +  P +  A+           KM K+ S    +   +  P    +  R+
Sbjct: 169 RFNTHFGPTFTVPVPHIVKATAKITDLQDPTAKMSKSSSSPAGIVDLLEDPARSAKKIRS 228

Query: 264 ---------IDDAD----VVSFAKRLTTLPMSEIDR-MAKLQGKEINEAKKIIATEITTM 309
                    + D +    + +     + L   EID  +A   GK   + KK +A  +   
Sbjct: 229 AVTDTGREIVFDEETKPGISNLLTIYSALSGREIDDLVAAYDGKGYGDLKKDLAEVVREF 288

Query: 310 V 310
           V
Sbjct: 289 V 289


>gi|253743903|gb|EET00185.1| Tyrosyl-tRNA synthetase [Giardia intestinalis ATCC 50581]
          Length = 386

 Score = 56.0 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 45/294 (15%), Positives = 103/294 (35%), Gaps = 38/294 (12%)

Query: 17  FIHQISN----PRELDILC---SQGVVTAYIGYDLTASSLHA--GHLTQLMLLFWLQKTG 67
            + +I++    P EL  L        +T Y G++ +   +H   G + + + +  L ++G
Sbjct: 18  LLEKIADDILCPEELHALLHVDDSKRLTCYDGFEPSGR-IHIAQG-IVKAINVNRLLRSG 75

Query: 68  HKPISLMGGGTSIIGDPSFRDESR-RMMRSQEIQENIEKIKGIFSSFIKYGTGKT-DALM 125
              +  +    + + +    + S+ + +    ++          S  + + TG+T     
Sbjct: 76  IDCVFYVADWFAALNNKCGANISKIQTLGRYFVEVWKACGMLGVSRPVVFNTGQTASVKF 135

Query: 126 LNNETWLCSIKYIDLLR--EIGSFFSVNRMLSFESVRSRLK-REQSLSFLEFNYMILQAY 182
           +    ++        +R   I   F+V R+    ++  R +  +Q +S  +  Y  +Q  
Sbjct: 136 VWASEFIRQNSSSYWMRVMNIARSFTVPRLQRCSTIMGRTEGDDQPIS--QILYPSMQCA 193

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLG----ERLKTPKLFALTSPLLTTASGTKMG 238
           D  EL  +    L   G DQ        D      E      +  +   LL      KM 
Sbjct: 194 DIFELKLD----LVEMGLDQRKVNALARDYCDKSAELKHHKPVILMHHMLLGLVGDGKMS 249

Query: 239 KTLSG-AIWLNKEMTSPYNFWQYWRNIDDAD--------VVSFAKRLTTLPMSE 283
           K++   AI+++          +   N    +        ++ + K +    + +
Sbjct: 250 KSVPDSAIYMDDSF---EEIQRKIMNASCPEPGEEGGNPILEYYKYIVFGAIEQ 300


>gi|296111064|ref|YP_003621445.1| tryptophanyl-tRNA synthetase [Leuconostoc kimchii IMSNU 11154]
 gi|295832595|gb|ADG40476.1| tryptophanyl-tRNA synthetase [Leuconostoc kimchii IMSNU 11154]
          Length = 338

 Score = 56.0 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 34/226 (15%), Positives = 70/226 (30%), Gaps = 33/226 (14%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     +Q +G + P  ++    +   +    ++ R+ +    +  
Sbjct: 12  PTGK-LHIGHYIGSLKNRVRMQNSGEYSPFVMIADTQAFTDNARNPEKIRQSLTEVALDY 70

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIG-SFFSVNRMLSFESVR 160
               I             KT   + +    L  +     +  +  +    N  +  E  +
Sbjct: 71  LAVGI----------DPAKTTIFVQSQIKGLFELTEY-FMNLVSVARLQRNPTVKSEISQ 119

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP- 219
                     FL   Y + QA D + + +     +   G DQ   +    +L        
Sbjct: 120 KGFNEGIPAGFL--TYPVSQAAD-IAIFRATKVPV---GDDQEPMLEQARELVRSFNNAY 173

Query: 220 KLFALTSPL----------LTTASGT-KMGKTLSGAIWLNKEMTSP 254
           +   L  P+          L    G  KM K+L   I+++ +  + 
Sbjct: 174 QADVLVEPVGVFPPKGQGRLPGIDGNAKMSKSLGNGIYISDDTDTM 219


>gi|163745924|ref|ZP_02153283.1| RNA pseudouridylate synthase family protein, putative [Oceanibulbus
           indolifex HEL-45]
 gi|161380669|gb|EDQ05079.1| RNA pseudouridylate synthase family protein, putative [Oceanibulbus
           indolifex HEL-45]
          Length = 354

 Score = 56.0 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 13/59 (22%), Positives = 29/59 (49%), Gaps = 1/59 (1%)

Query: 337 PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           P  + +    S+G  +  ++ +AG   S  EA R +++  +++N   I +  L +  +D
Sbjct: 12  PQNTDTDASTSKGDRIAKVLSRAG-VASRREAERMIEAGRVRVNGEQIDSPALNVTPED 69


>gi|323698548|ref|ZP_08110460.1| tryptophanyl-tRNA synthetase [Desulfovibrio sp. ND132]
 gi|323458480|gb|EGB14345.1| tryptophanyl-tRNA synthetase [Desulfovibrio desulfuricans ND132]
          Length = 329

 Score = 56.0 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 51/335 (15%), Positives = 98/335 (29%), Gaps = 58/335 (17%)

Query: 33  QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ-KTGHKPISLMGGG---TSIIGDPSFRD 88
                   G   T   LH GH   ++   WL+ +  +     +      TS   DP+   
Sbjct: 2   SEKQRILSGMRPTGP-LHLGHYFGVIA-NWLKMQEEYDCYFFVADWHALTSEYADPTRIK 59

Query: 89  ESRRMMRSQEIQENIE---KIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIG 145
                +    +   ++         S   ++        M     WL             
Sbjct: 60  GFIPGLVKDWVAAGLDPEKCSIFQQSQIKEHAELNLILSMYTPLGWLERCPTF------- 112

Query: 146 SFFSVNRMLSFESVRSRLKREQSLSFLEFN-YMILQAYDFVELAKNYDCRLQMGGSDQWG 204
                 ++   +           L+   F  Y +L + D + + K     +   G DQ  
Sbjct: 113 -KDQKEQLTQKD-----------LNTHGFLGYPVLMSVDIL-MYKPLAVPV---GKDQLP 156

Query: 205 NIICGIDLGERLKT--------PKLFALT-SPLLTTASGTKMGKTLSGAIWLNKEMTS-- 253
           ++    ++  R                LT +P+L    G KM K+   +I L++ +    
Sbjct: 157 HLELTREIARRFNHLNNTDLFPEPADMLTEAPVLPGLDGRKMSKSYGNSIMLSEPLDEIM 216

Query: 254 -----PYNFWQYWRNID--DADVVS---FAKRLTT-LPMSEIDRMAKLQGKEINEAKKII 302
                        R  D  D D+ +   + K +T    + EI +  +       + KK++
Sbjct: 217 PKVRGMKTDENRLRKSDPGDPDICNLFPYHKLMTDPAKLPEIVKGCRDASWGCVDCKKLL 276

Query: 303 A---TEITTMVHGREEAEKAATAAMECFDMSIHSQ 334
                E  T +H R  A             +  ++
Sbjct: 277 MKSLEEFLTPLHERRAACTDERVREILEQGNAKAR 311


>gi|297526319|ref|YP_003668343.1| tryptophanyl-tRNA synthetase [Staphylothermus hellenicus DSM 12710]
 gi|297255235|gb|ADI31444.1| tryptophanyl-tRNA synthetase [Staphylothermus hellenicus DSM 12710]
          Length = 368

 Score = 56.0 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 57/324 (17%), Positives = 102/324 (31%), Gaps = 75/324 (23%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSF 86
           L  L +   V    G+  +  + H GHL  +  L +LQ+ G     ++    +       
Sbjct: 57  LQALRNGEKVAVLTGFMPSGHT-HLGHLMVIEELRFLQELGAHVKIVIADAEAYA----- 110

Query: 87  RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGS 146
               RR+ R + I+  IE I    +        KT+             +Y  L++    
Sbjct: 111 ---VRRLSRKETIKYGIEYIAHAIA--WGLNPEKTEFYFQT----AQKTEYYRLIQMFSR 161

Query: 147 FFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL----AKNYDCRLQMGGSDQ 202
             S+  M   E++   +   + ++       + QA D + L       Y   L   G+DQ
Sbjct: 162 RVSMAEM---EAIYGDISPGKIIA------SLTQAADILHLQLPEYGGYKHVLVPVGADQ 212

Query: 203 WGNIICGIDLGERLKTPKLFALTSPL------LTTASGTKMGKTLSGA-IWL-------- 247
             ++    D+ +R  T     L  P       +    G KM  +     I+L        
Sbjct: 213 DPHLRLSRDIADRFHTE--LGLNRPASFYHKFIRGLDGNKMSSSRPDYAIFLLDKPDIIK 270

Query: 248 ----------------------NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID 285
                                   E  + Y  + Y+   DD ++    K        E  
Sbjct: 271 RKVMMALTGGRATAEEQRKYGGIPEKCTVYELYMYFLYKDDRELYKLYK--------ECV 322

Query: 286 RMAKLQGKEINEAKKIIATEITTM 309
               L G++   A K++   +T  
Sbjct: 323 EGKILCGEDKRIAAKLLVEMLTEH 346


>gi|326577119|gb|EGE27013.1| tryptophanyl-tRNA synthetase [Moraxella catarrhalis O35E]
          Length = 353

 Score = 56.0 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 48/295 (16%), Positives = 86/295 (29%), Gaps = 47/295 (15%)

Query: 50  HAGHLTQ-LMLL-----FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
           H G+    +           +         +     II      +  R           +
Sbjct: 19  HLGNYVGSIRPAIAEAHRAFENHDGDAFFFLADYHGIIKCFDPDEIHRS--TRAIAATWL 76

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLL--REIGSFFSVNRMLSFESVRS 161
                         +   +   L    W+ +      L  R      +V+  LS E    
Sbjct: 77  ACGLDPEKVIFYRQSDIPEIPEL---AWILNCSCAKGLMNRAHAYKAAVDMNLSKED--- 130

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP-- 219
               +  +S   F Y +L A D +     +   + +G  DQ  +I    D+         
Sbjct: 131 -TDPDYGISMGLFGYPVLMAADILMFNATH---VPVG-KDQIQHIEMARDIAGSFNFKYK 185

Query: 220 ----KLFALT---SPLLTTASGTKMGKTLSGAIWL---NKEMTSPYNFWQY-WRNI---- 264
               + FA+    +PLLT   G KM K+    I L   +    +P    +     I    
Sbjct: 186 PLFVEPFAVVDENTPLLTGLDGRKMSKSYGNTIPLFGDDNPQINPEKALKKAVMQIVTNS 245

Query: 265 ------DDADVVSFAKRL-TTLPMSEIDRMAKLQGKEI--NEAKKIIATEITTMV 310
                  D +  +  +         EI+ +A    + I   EAK+I+  +I   +
Sbjct: 246 QPPEEPKDPEHCTIFEIYKAFGTPEEIEALATHYRRGIGWGEAKEILFNKINHEI 300


>gi|320353051|ref|YP_004194390.1| tryptophanyl-tRNA synthetase [Desulfobulbus propionicus DSM 2032]
 gi|320121553|gb|ADW17099.1| tryptophanyl-tRNA synthetase [Desulfobulbus propionicus DSM 2032]
          Length = 322

 Score = 56.0 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 35/231 (15%), Positives = 77/231 (33%), Gaps = 38/231 (16%)

Query: 41  GYDLTASSLHAGHLTQLM--LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQE 98
           G   +   LH G+   +M  ++  ++        +     + + D       R  +R   
Sbjct: 7   GIQPSGK-LHIGNYFGMMHPMVRHMETAELYVFIVDLHALTSVHD-------RDRLRQGT 58

Query: 99  IQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCS-IKYIDLLREIGSFFSVNRMLSFE 157
           ++   + +             ++D   +   +WL S +  + LL    ++         +
Sbjct: 59  LEAAADFLALGLDPERCIFWVQSDVPEVCELSWLLSVLTPMGLLERCHAY--------KD 110

Query: 158 SVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK 217
            V   +     L    F Y +L A D + L +     +   G DQ  ++    D+  R  
Sbjct: 111 KVAKNIAASHGL----FAYPVLMAADIL-LYQAEVVPV---GKDQKQHVEVARDIAIRFN 162

Query: 218 T--PKLFAL-------TSPLLTTASGTKMGKTLSGA--IWLNKEMTSPYNF 257
               + F +       T+ ++    G KM K+      I+L+++       
Sbjct: 163 NTFGETFVIPEPEIDETTAIVPGLDGQKMSKSYDNTIPIFLDEKALRKRVM 213


>gi|240169088|ref|ZP_04747747.1| tryptophanyl-tRNA synthetase [Mycobacterium kansasii ATCC 12478]
          Length = 343

 Score = 56.0 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 47/247 (19%), Positives = 85/247 (34%), Gaps = 30/247 (12%)

Query: 34  GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRM 93
           G    + G   T+ SLH G+    +  +   +  H     +    + I  P   +  RR 
Sbjct: 6   GSRRIFSGVQPTSDSLHLGNALGAVTQWVALQDDHDAFFCVVDLHA-ITLPQDPEALRR- 63

Query: 94  MRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRM 153
                      +     + ++  G     A +          +   +L     F   +RM
Sbjct: 64  -----------RTLITAAQYLALGIDPARATIFVQSHVPAHSQLAWVLGCFTGFGQASRM 112

Query: 154 LSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLG 213
             F+   SR +  +S +   F Y +LQA D +     YD  L   G DQ  ++    D+ 
Sbjct: 113 TQFKDKSSR-QGAESTTVGLFTYPVLQAADVLA----YDSDLVPVGEDQRQHLELARDVA 167

Query: 214 ERLKT--PKLFALTSPLLTTASGT---------KMGKTLSGAIWLNKEMTSPYNFWQYWR 262
           +R  +  P  F +   L+   +           KM K+ S    L   +  P    +  R
Sbjct: 168 QRFNSRFPDTFVVPDVLIPKITAKIYDLQDPTSKMSKSASTDAGLISLLDDPALSAKKIR 227

Query: 263 N-IDDAD 268
           + + D++
Sbjct: 228 SAVTDSE 234


>gi|226489134|emb|CAX74916.1| tryptophanyl-tRNA synthetase [Schistosoma japonicum]
          Length = 402

 Score = 56.0 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 50/336 (14%), Positives = 102/336 (30%), Gaps = 52/336 (15%)

Query: 9   LSILSERGFIHQISNPRELDILCS-QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           L  L +R       +  E+ +    +     Y G   ++ +LH GH+   ++  W Q   
Sbjct: 56  LHHLLKRQIFFSHRDLEEIILRIEQKKPFFLYTGRGPSSEALHLGHVVPFIINKWFQD-- 113

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
                 +     +I          + +   E++      +      I  G       + +
Sbjct: 114 ------VFDVPLVIQLTDDEKFLWKNLSISEVRHLT---RENAKDIIAMGFDPKKTFIFS 164

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA------ 181
           N  ++      D  R +     + R++++   R+      S    + ++  +QA      
Sbjct: 165 NFEYMG--TCPDFYRTV---CQIQRLVTYNQARAIFGFNDSDCIGKISFPAIQAAPSFAQ 219

Query: 182 ---YDFVELAK--NYDCRLQMGGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTAS 233
                F  L K  +  C +     DQ        D+  RL  PK   ++++  P L    
Sbjct: 220 SFPTVFQNLKKPEDVGCLIPC-AIDQDPYFRMTRDVAPRLGLPKPSLIYSVFFPALQGNQ 278

Query: 234 GTKMGKTLSG-AIWLNKEMTSPYNFWQYWR----------------NIDDADVVSFAKRL 276
            TKM  +    +++L        N    +                 N        + +  
Sbjct: 279 -TKMSASNPNTSVFLTDTPKQIKNKINKYAYSGGGDTVAEHRECGGNCAIDVSYQYLRFF 337

Query: 277 --TTLPMSEIDRMAKLQGKEINEAKKIIATEITTMV 310
                 + +I +          E KK + T +T  V
Sbjct: 338 LEDDQKLEQIRQDYSSGKMLTGEIKKELITLLTDFV 373


>gi|226489132|emb|CAX74915.1| tryptophanyl-tRNA synthetase [Schistosoma japonicum]
          Length = 413

 Score = 56.0 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 50/336 (14%), Positives = 102/336 (30%), Gaps = 52/336 (15%)

Query: 9   LSILSERGFIHQISNPRELDILCS-QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           L  L +R       +  E+ +    +     Y G   ++ +LH GH+   ++  W Q   
Sbjct: 67  LHHLLKRQIFFSHRDLEEIILRIEQKKPFFLYTGRGPSSEALHLGHVVPFIINKWFQD-- 124

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
                 +     +I          + +   E++      +      I  G       + +
Sbjct: 125 ------VFDVPLVIQLTDDEKFLWKNLSISEVRHLT---RENAKDIIAMGFDPKKTFIFS 175

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA------ 181
           N  ++      D  R +     + R++++   R+      S    + ++  +QA      
Sbjct: 176 NFEYMG--TCPDFYRTV---CQIQRLVTYNQARAIFGFNDSDCIGKISFPAIQAAPSFAQ 230

Query: 182 ---YDFVELAK--NYDCRLQMGGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTAS 233
                F  L K  +  C +     DQ        D+  RL  PK   ++++  P L    
Sbjct: 231 SFPTVFQNLKKPEDVGCLIPC-AIDQDPYFRMTRDVAPRLGLPKPSLIYSVFFPALQGNQ 289

Query: 234 GTKMGKTLSG-AIWLNKEMTSPYNFWQYWR----------------NIDDADVVSFAKRL 276
            TKM  +    +++L        N    +                 N        + +  
Sbjct: 290 -TKMSASNPNTSVFLTDTPKQIKNKINKYAYSGGGDTVAEHRECGGNCAIDVSYQYLRFF 348

Query: 277 --TTLPMSEIDRMAKLQGKEINEAKKIIATEITTMV 310
                 + +I +          E KK + T +T  V
Sbjct: 349 LEDDQKLEQIRQDYSSGKMLTGEIKKELITLLTDFV 384


>gi|56756935|gb|AAW26639.1| SJCHGC05295 protein [Schistosoma japonicum]
          Length = 413

 Score = 56.0 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 50/336 (14%), Positives = 102/336 (30%), Gaps = 52/336 (15%)

Query: 9   LSILSERGFIHQISNPRELDILCS-QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           L  L +R       +  E+ +    +     Y G   ++ +LH GH+   ++  W Q   
Sbjct: 67  LHHLLKRQIFFSHRDLEEIILRIEQKKPFFLYTGRGPSSEALHLGHVVPFIINKWFQD-- 124

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
                 +     +I          + +   E++      +      I  G       + +
Sbjct: 125 ------VFDVPLVIQLTDDEKFLWKNLSISEVRHLT---RENAKDIIAMGFDPKKTFIFS 175

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA------ 181
           N  ++      D  R +     + R++++   R+      S    + ++  +QA      
Sbjct: 176 NFEYMG--TCPDFYRTV---CQIQRLVTYNQARAIFGFNDSDCIGKISFPAIQAAPSFAQ 230

Query: 182 ---YDFVELAK--NYDCRLQMGGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTAS 233
                F  L K  +  C +     DQ        D+  RL  PK   ++++  P L    
Sbjct: 231 SFPTVFQNLKKPEDVGCLIPC-AIDQDPYFRMTRDVAPRLGLPKPSLIYSVFFPALQGNQ 289

Query: 234 GTKMGKTLSG-AIWLNKEMTSPYNFWQYWR----------------NIDDADVVSFAKRL 276
            TKM  +    +++L        N    +                 N        + +  
Sbjct: 290 -TKMSASNPNTSVFLTDTPKQIKNKINKYAYSGGGDTVAEHRECGGNCAIDVSYQYLRFF 348

Query: 277 --TTLPMSEIDRMAKLQGKEINEAKKIIATEITTMV 310
                 + +I +          E KK + T +T  V
Sbjct: 349 LEDDQKLEQIRQDYSSGKMLTGEIKKELITLLTDFV 384


>gi|126465398|ref|YP_001040507.1| tryptophanyl-tRNA synthetase [Staphylothermus marinus F1]
 gi|126014221|gb|ABN69599.1| tryptophanyl-tRNA synthetase [Staphylothermus marinus F1]
          Length = 368

 Score = 56.0 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 54/324 (16%), Positives = 100/324 (30%), Gaps = 75/324 (23%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSF 86
           L  L +   V    G+  +  + H GHL  +  L +LQ+ G     ++    +       
Sbjct: 57  LQALRNGEKVAVLTGFMPSGHT-HLGHLMVIEELRFLQELGAHVKIVIADAEAYA----- 110

Query: 87  RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGS 146
               R++ R + I+  IE I    +  +     +               +Y  L++    
Sbjct: 111 ---VRKLSREETIEYGIEYITHAIAWGLDPEKTEFYFQTAQ------KTEYYRLIQMFSR 161

Query: 147 FFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL----AKNYDCRLQMGGSDQ 202
             S+  M   E++   +   + ++       + QA D + L       Y   L   G+DQ
Sbjct: 162 KVSMAEM---EAIYGDISPGKIIA------SLTQAADILHLQLPEYGGYKYVLVPVGADQ 212

Query: 203 WGNIICGIDLGERLKTPKLFALTSPL------LTTASGTKMGKTLSGA-IWL-------- 247
             ++    D+ +R  T     L  P       +    G KM  +     I+L        
Sbjct: 213 DPHLRLSRDIADRFHTE--LGLNRPASFYHKFIRGLDGNKMSSSKPDYAIFLLDKPDIIK 270

Query: 248 ----------------------NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEID 285
                                   E  + Y  + Y+   DD  +    K        E  
Sbjct: 271 KKVMMALTGGRATAEEQRRYGGIPEKCTVYELYMYFLYKDDQKLYKLYK--------ECV 322

Query: 286 RMAKLQGKEINEAKKIIATEITTM 309
               L G++   A K++   +T  
Sbjct: 323 EGKILCGEDKRIAAKLLVEMLTEH 346


>gi|289743725|gb|ADD20610.1| cytoplasmic tryptophanyl-tRNA synthetase [Glossina morsitans
           morsitans]
          Length = 430

 Score = 56.0 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 47/247 (19%), Positives = 86/247 (34%), Gaps = 30/247 (12%)

Query: 15  RGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +   +  L  QG     Y G   ++ SLH GHL   ++  WLQ+T   P+ +
Sbjct: 93  RGIFFSHRDLHTILNLKEQGKPFYLYTGRGPSSESLHLGHLIPFIMTKWLQETFDVPLVI 152

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                         D+ + + +  ++ E I+  +      +  G       + NN T++ 
Sbjct: 153 -----------QLTDDEKTLWKDLKVDEAIKLARENAKDIVAMGFNVEKTFIFNNLTFMG 201

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA-------YDFVE 186
               +       +   + + ++F  V+       S    +  +   QA       + F+ 
Sbjct: 202 QCPSM-----YQNIIRIQKCVTFNQVKGIFGFGDSDVIGKIGFPAAQAAPAISSTFPFLF 256

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKL---FALTSPLLTTASGTKMGKTLSG 243
             K   C +     DQ        D+  +L  PK     +   P L  A  +KM  +   
Sbjct: 257 GNKKVHCLVPC-AIDQDPYFRMTRDVSPKLGYPKCALIHSSFFPALQGAK-SKMSASEQN 314

Query: 244 -AIWLNK 249
            AI+L  
Sbjct: 315 SAIFLTD 321


>gi|332020200|gb|EGI60644.1| Tryptophanyl-tRNA synthetase, cytoplasmic [Acromyrmex echinatior]
          Length = 411

 Score = 56.0 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 60/346 (17%), Positives = 109/346 (31%), Gaps = 70/346 (20%)

Query: 15  RGFIHQISNPRELDILCSQGVV-TAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +   +  L  QG +   Y G   ++ ++H GHL   M   WLQ+  + P+ +
Sbjct: 72  RGIFFSHRDMHTILNLYEQGKLFYLYTGRGPSSDAMHLGHLIPFMFCKWLQEVFNVPLII 131

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                         D+ + + ++  I++ I+         I  G       + +N   + 
Sbjct: 132 -----------QLTDDEKAIWKNLNIEDAIKLAYANARDIIACGFNPEKTFIFSNLEHIG 180

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA-------YDFVE 186
           +           +   + + ++F  V+       S    +  +   QA       + F+ 
Sbjct: 181 NNSTF-----YQNMIRIQKCVTFNQVKGIFGFGDSDPIAKIAFPPTQAAPAISGSFPFIF 235

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTASGTKMGKTLSG 243
                 C +     DQ        D+  RL  PK   L A   P L  +  TKM  + + 
Sbjct: 236 KDTKVHCLIPC-AIDQDPYFRMTRDVAPRLGFPKPALLHATFFPALQGSK-TKMSASDNN 293

Query: 244 -AIWLNK-------------------------------EMTSPYNFWQYWRNIDDADVVS 271
            AI+L                                 E+   Y + +++   DD  +  
Sbjct: 294 TAIFLTDTAKQIKNKVNKHAFSGGQATLEEHRQLGGNCEVDISYQWLRFFLE-DDERLEQ 352

Query: 272 FAKRLT-------TLPMSEIDRMAKLQGKEINEAKKIIATEITTMV 310
             K  T        L    ID + +L      EAK  +  E+    
Sbjct: 353 IRKGYTNGEILTGELKKELIDVLQRLVAAH-QEAKSRVTDEVIKQY 397


>gi|326570473|gb|EGE20513.1| tryptophanyl-tRNA synthetase [Moraxella catarrhalis BC8]
 gi|326571157|gb|EGE21181.1| tryptophanyl-tRNA synthetase [Moraxella catarrhalis BC7]
          Length = 353

 Score = 56.0 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 50/295 (16%), Positives = 85/295 (28%), Gaps = 47/295 (15%)

Query: 50  HAGHLTQ-LMLL-----FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
           H G+    +           +         +     II      +  R           +
Sbjct: 19  HLGNYVGSIRPAIAEAHRAFENHDGDAFFFLADYHGIIKCFDPDEIHRS--TRAIAATWL 76

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLL--REIGSFFSVNRMLSFESVRS 161
                         +   +   L    W+ +      L  R      +V+  LS E    
Sbjct: 77  ACGLDPEKVIFYRQSDIPEIPEL---AWILNCSCAKGLMNRAHAYKAAVDMNLSKED--- 130

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP-- 219
               +  +S   F Y +L A D +     +   + +G  DQ  +I    D+         
Sbjct: 131 -TDPDYGISMGLFGYPVLMAADILMFNATH---VPVG-KDQIQHIEMARDIAGSFNFKYK 185

Query: 220 ----KLFALT---SPLLTTASGTKMGKTLSGAIWL--------NKEMTSPYNFWQYWRNI 264
               + FA+    +PLLT   G KM K+    I L        N E        Q   N 
Sbjct: 186 PLFVEPFAVVDENTPLLTGLDGRKMSKSYGNTIPLFGDGNPQINPEKALKKAVMQIVTNS 245

Query: 265 D------DADVVSFAKRL-TTLPMSEIDRMAKLQGKEI--NEAKKIIATEITTMV 310
                  D +  +  +         EI+ +A    + I   EAK+I+  +I   +
Sbjct: 246 QPPEEPKDPEHCTIFEIYKAFGTPEEIEALATHYRRGIGWGEAKEILFNKINHEI 300


>gi|315607506|ref|ZP_07882501.1| tryptophan--tRNA ligase [Prevotella buccae ATCC 33574]
 gi|315250689|gb|EFU30683.1| tryptophan--tRNA ligase [Prevotella buccae ATCC 33574]
          Length = 382

 Score = 56.0 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 49/260 (18%), Positives = 79/260 (30%), Gaps = 38/260 (14%)

Query: 20  QISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQ-LMLLFWLQKTG--HKPISLMGG 76
           Q + P+E+     + ++T   G   T   LH GH    L     LQ  G   +    M  
Sbjct: 10  QKTTPKEIQHRMGKIILT---GDRPTGK-LHLGHYVGSLRRRVQLQNAGDYERMFVFMAD 65

Query: 77  GTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIK 136
             ++  +    ++ R+ M    +      +             K    + +    L  + 
Sbjct: 66  VQALTDNADNPEKIRQNMMEVALDYLAAGL----------DPEKCTLFVQSQIPELAELT 115

Query: 137 YIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQ 196
              +     S    N  +  E      +    L F  F Y + QA D + L K       
Sbjct: 116 TYLMNLITVSRVQRNPTVKTEIKMRNFEANIPLGF--FCYPVSQAAD-IALFKATTVP-- 170

Query: 197 MGGSDQWGNIICGIDLGERLKTPKLFALTSPL-----------LTTASGT-KMGKTLSGA 244
             G DQ   +    +L  R        L  P            L    G  KM K+L   
Sbjct: 171 -AGEDQEPMLEVTRELVRRFNQTYGEVLVEPAIMLPENATARRLPGTDGKEKMSKSLGNC 229

Query: 245 IWLNKEMTSPYNFWQYWRNI 264
           I+L+         WQ  R++
Sbjct: 230 IYLSDSA---EEVWQKVRSM 246


>gi|46445804|ref|YP_007169.1| tryptophanyl-tRNA synthetase [Candidatus Protochlamydia amoebophila
           UWE25]
 gi|46399445|emb|CAF22894.1| putative tryptophanyl-tRNA synthetase (=tryptophan-tRNA ligase)
           [Candidatus Protochlamydia amoebophila UWE25]
          Length = 353

 Score = 55.6 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 33/218 (15%), Positives = 70/218 (32%), Gaps = 25/218 (11%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
            T   LH GH    +      +  ++   ++    ++   PS   +   +   + ++  +
Sbjct: 13  PTGL-LHLGHYVGSLKNRIALQDSYECYFIIADLHTLTTKPS---KEEILQVRENVRTMV 68

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYI-DLLREIGSFFSVNRMLSFESVRSR 162
                           K+   + +    +  +  I ++L  +     +  +   E  R+ 
Sbjct: 69  IDYLACG-----IDPKKSTIYLQSAIPAVYEMNLIFEMLISLNRLIGLPSL--KEMARNA 121

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT---- 218
                ++ F    Y ILQ  D +    +    L   G D   +I    D+  R       
Sbjct: 122 HLDNDNMPFGLIGYPILQTADILMPKAH----LVPVGKDNEAHIELARDIARRFNQFYGD 177

Query: 219 ----PKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEM 251
               P++    +P L    G  KM K+    I+L  + 
Sbjct: 178 VFPLPEVLLSQTPTLVGTDGKGKMSKSAGNTIFLADDA 215


>gi|326560447|gb|EGE10829.1| tryptophanyl-tRNA synthetase [Moraxella catarrhalis 7169]
          Length = 353

 Score = 55.6 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 49/295 (16%), Positives = 84/295 (28%), Gaps = 47/295 (15%)

Query: 50  HAGHLTQ-LMLL-----FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
           H G+    +           +         +     II      +  R           +
Sbjct: 19  HLGNYVGSIRPAIAEAHRAFENHDGDAFFFLADYHGIIKCFDPDEIHRS--TRAIAATWL 76

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLL--REIGSFFSVNRMLSFESVRS 161
                         +   +   L    W+ +      L  R      +V+  LS E    
Sbjct: 77  ACGLDPEKVIFYRQSDIPEIPEL---AWILNCSCAKGLMNRAHAYKAAVDMNLSKED--- 130

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP-- 219
               +  +S   F Y +L A D +     +   + +G  DQ  +I    D+         
Sbjct: 131 -TDPDYGISMGLFGYPVLMAADILMFNATH---VPVG-KDQIQHIEMARDIAGSFNFKYK 185

Query: 220 ----KLFALT---SPLLTTASGTKMGKTLSGAIWL--------NKEMTSPYNFWQYWRNI 264
               + FA+    +PLLT   G KM K+    I L        + E        Q   N 
Sbjct: 186 PLFVEPFAVVDENTPLLTGLDGRKMSKSYGNTIPLFGDGNPQIDPEKALKKAVMQIVTNS 245

Query: 265 D------DADVVSFAKRL-TTLPMSEID--RMAKLQGKEINEAKKIIATEITTMV 310
                  D +  +  +         EI+   M   +G    EAK+I+  +I   +
Sbjct: 246 QPPEEPKDPEHCTIFEIYKAFGTPEEIETLAMHYRRGIGWGEAKEILFNKINHEI 300


>gi|213401525|ref|XP_002171535.1| tyrosyl-tRNA synthetase [Schizosaccharomyces japonicus yFS275]
 gi|211999582|gb|EEB05242.1| tyrosyl-tRNA synthetase [Schizosaccharomyces japonicus yFS275]
          Length = 399

 Score = 55.6 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 39/256 (15%), Positives = 82/256 (32%), Gaps = 22/256 (8%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            L  R    ++     L  +  +  +  Y G   T    H G+   +M L    K     
Sbjct: 10  ELITRSL-QEVLGGPALKEILKERNLNLYWGTAPTGRP-HCGYFVPMMKLADFLKADVHV 67

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT---GKTDALMLN 127
             L+    + +      D  +  M  + +Q  +   + +  + +        K   ++ +
Sbjct: 68  KVLLADVHAFL------DNMKAPM--ELVQYRVRYYEAVVKAILVSLNVPIEKLKFVIGS 119

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           +   L     +D  R        +   +   V  ++            Y  +QA D   L
Sbjct: 120 SYQ-LSKEYTLDNFRLTAITTEHDARRAGAEVVKQVSSPL---LSGLLYPGMQALDEQYL 175

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
               +   Q GG DQ    +    +   L   K   L +P++ + +G KM  + +    +
Sbjct: 176 ----EVDAQFGGVDQRKIFVMAEKVLPALGYKKRVHLMNPMVPSLAGGKMSASAAANAKI 231

Query: 248 NKEMTSPYNFWQYWRN 263
           +  +  P    +  R+
Sbjct: 232 D-LLDEPNVVKKKIRS 246


>gi|17944165|gb|AAL47978.1| GH09538p [Drosophila melanogaster]
          Length = 516

 Score = 55.6 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 43/251 (17%), Positives = 78/251 (31%), Gaps = 38/251 (15%)

Query: 28  DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGD-PSF 86
           +   ++     + G   T  SLH G+    +   W+Q    +        T  I D  S 
Sbjct: 72  EEHNTRWPRKVFSGIQPTG-SLHLGNYLGAVR-KWVQLQNAR-----DDVTVCIVDLHSI 124

Query: 87  RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGS 146
                  +  + I      +             K+   + +         +I  L  + +
Sbjct: 125 TMPHNPPLLRENIFTMAATLLACG-----IDPTKSTLFVQSAVAEHAEFNWI--LSSLTT 177

Query: 147 FFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNI 206
              + ++  F   +SRL ++  L    + Y +LQA D + L K+    +   G+DQ  +I
Sbjct: 178 MPRLAQLPQFRE-KSRLLKDVPLGL--YVYPVLQAAD-IMLYKSTHVPV---GADQIQHI 230

Query: 207 ICGIDLGERLKTPKLFALTSPLLT--TASG------------TKMGKTLSGAIWLNKEMT 252
                L         +  T P+ T     G             KM K+ +          
Sbjct: 231 QLAQHLARIYNGR--YGETFPVCTAIIEDGDASRVLSLRDPSKKMSKSEANPKATINLCD 288

Query: 253 SPYNFWQYWRN 263
           SP    Q  + 
Sbjct: 289 SPDLITQKIKK 299


>gi|24666151|ref|NP_649018.2| CG7441 [Drosophila melanogaster]
 gi|7293931|gb|AAF49293.1| CG7441 [Drosophila melanogaster]
 gi|66803739|gb|AAY56635.1| unknown [Drosophila melanogaster]
 gi|201065663|gb|ACH92241.1| FI03887p [Drosophila melanogaster]
          Length = 665

 Score = 55.6 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 43/251 (17%), Positives = 78/251 (31%), Gaps = 38/251 (15%)

Query: 28  DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGD-PSF 86
           +   ++     + G   T  SLH G+    +   W+Q    +        T  I D  S 
Sbjct: 72  EEHNTRWPRKVFSGIQPTG-SLHLGNYLGAVR-KWVQLQNAR-----DDVTVCIVDLHSI 124

Query: 87  RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGS 146
                  +  + I      +             K+   + +         +I  L  + +
Sbjct: 125 TMPHNPPLLRENIFTMAATLLACG-----IDPTKSTLFVQSAVAEHAEFNWI--LSSLTT 177

Query: 147 FFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNI 206
              + ++  F   +SRL ++  L    + Y +LQA D + L K+    +   G+DQ  +I
Sbjct: 178 MPRLAQLPQFRE-KSRLLKDVPLGL--YVYPVLQAAD-IMLYKSTHVPV---GADQIQHI 230

Query: 207 ICGIDLGERLKTPKLFALTSPLLT--TASG------------TKMGKTLSGAIWLNKEMT 252
                L         +  T P+ T     G             KM K+ +          
Sbjct: 231 QLAQHLARIYNGR--YGETFPVCTAIIEDGDASRVLSLRDPSKKMSKSEANPKATINLCD 288

Query: 253 SPYNFWQYWRN 263
           SP    Q  + 
Sbjct: 289 SPDLITQKIKK 299


>gi|50289549|ref|XP_447206.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49526515|emb|CAG60139.1| unnamed protein product [Candida glabrata]
          Length = 392

 Score = 55.6 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 40/239 (16%), Positives = 80/239 (33%), Gaps = 36/239 (15%)

Query: 18  IHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGG 76
           + ++ NP+ +  +  +G  +  Y G   T    H G+   +  L    K G +   L+  
Sbjct: 14  LQEVLNPQIIKDVLKEGRPLKLYWGTAPTGRP-HCGYFVAMTKLAHFLKAGVEVTVLLAD 72

Query: 77  GTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK--YGTGKTDALMLNNETWLCS 134
             + +      D  +  +  + +    +  +    + +K      +    ++ +   L  
Sbjct: 73  LHAFL------DNMKAPL--EVVNYRTKYYEYTVKAILKSINVPIEKLKFVVGSSYQLGG 124

Query: 135 IKYIDLLREIGSFFSVNRMLSFESVRSRLKRE------QSLSFLEFNYMILQAYDFVELA 188
              +DL       F ++ M+S      R   +        L      Y ++QA D   L 
Sbjct: 125 DYTLDL-------FKLSNMVSQND-AKRAGADVVKQVANPL-LSGLIYPLMQALDEQFL- 174

Query: 189 KNYDCRLQMGGSDQWGNIICGID-LGERLKTPKLFAL--TSPLLTTASGTKMGKTLSGA 244
              D  +Q GG DQ    +   + L       +   +    P LT   G KM  +   +
Sbjct: 175 ---DVDVQFGGVDQRKIFVLAEENLPRIGYKKRAHLMNPMVPGLT--QGGKMSASDPNS 228


>gi|300743783|ref|ZP_07072803.1| tryptophan--tRNA ligase [Rothia dentocariosa M567]
 gi|300380144|gb|EFJ76707.1| tryptophan--tRNA ligase [Rothia dentocariosa M567]
          Length = 354

 Score = 55.2 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 54/322 (16%), Positives = 109/322 (33%), Gaps = 55/322 (17%)

Query: 21  ISNPRELDILCSQG----VVTAYIGYDLTASSLHAGHLTQLML--LFWLQKTGHKPISLM 74
           +S+ ++ D           V  Y G   +A S+H G+    +   +   +   ++ +  +
Sbjct: 1   MSDEKKQDKSLIPNASLDRVRVYSGAQPSADSMHLGNYIGAVNNWVALQEDPANECLFFI 60

Query: 75  GGGTSII--GDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL 132
               +I    DP    E  R+  +Q I   I+  +  F    +       A +LN  T  
Sbjct: 61  PDMHAITVPQDPQSLRERTRLTAAQYIAAGIDPARSPFFVQSQVPEHAQLAWVLNCFTGF 120

Query: 133 CSIKYIDLLREIGSFFSVNRMLS-FESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
                             +RM    +  + +     S+    F Y +L A D + L +  
Sbjct: 121 GE---------------ASRMTQFKDKSQKQGADNASVGL--FTYPVLMAADIL-LYQVD 162

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKT--PKLFALTSPLLTTASGT---------KMGKT 240
              +   G DQ  ++    +L +R  +   + F +  P++   +           KM K+
Sbjct: 163 GVPV---GEDQRQHLELTRNLAQRFNSRFGETFVVPEPIIMKETAKIYDLQDPTSKMSKS 219

Query: 241 LSGAIWLNKEMTSPYNFWQYWRN--IDDADVVSF-----------AKRLTTLPMSEIDRM 287
            +    L K +  P    +  ++   DD  V+++               + +    ID +
Sbjct: 220 AASDKGLIKLLDEPKATVKKIKSAVTDDGSVIAYDREAKPGVSNLLSIYSAMTGESIDSL 279

Query: 288 AKL-QGKEINEAKKIIATEITT 308
            K  +GK     K  +A  +  
Sbjct: 280 VKRYEGKMYGHLKVDLADVVVE 301


>gi|239617256|ref|YP_002940578.1| tryptophanyl-tRNA synthetase [Kosmotoga olearia TBF 19.5.1]
 gi|239506087|gb|ACR79574.1| tryptophanyl-tRNA synthetase [Kosmotoga olearia TBF 19.5.1]
          Length = 327

 Score = 55.2 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 40/264 (15%), Positives = 83/264 (31%), Gaps = 51/264 (19%)

Query: 49  LHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKG 108
           LH G+LT L     LQ  G++    +    ++         +  +  +         I  
Sbjct: 13  LHLGNLTALERWVELQNEGNECYFFVADWHAL---------TSHIDSTNNFAGWSLDIVK 63

Query: 109 IFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRML-------SFESVRS 161
           I+ +       +   + + +       ++ +L        SV+R+          + +  
Sbjct: 64  IYVAAG--LDPEKSVIFIQSAV----KEHAELFLLFSMLVSVSRLERIPTYKEQKQQIND 117

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--P 219
           R             Y +LQA D + + + +   +   G DQ  +I    ++  R      
Sbjct: 118 RDLSSAGF----LLYPVLQAADIL-MYRAHGVPV---GEDQVYHIELTREIARRFNNLFG 169

Query: 220 KLFALTSPLL------TTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNID-------- 265
           ++F    P+L          G KM K+ +  I ++ +    +                  
Sbjct: 170 EVFPEPEPILAKVAKLPGTDGRKMSKSYNNFIPIDTDEKQLWKMIAPMMTDPARKRRTDP 229

Query: 266 -DAD---VVSFAKRLTTLPMSEID 285
            D +   V  + K  T     E+D
Sbjct: 230 GDPEKCPVWEYHKAFT-HSQEELD 252


>gi|225849351|ref|YP_002729515.1| tryptophanyl-tRNA synthetase [Sulfurihydrogenibium azorense Az-Fu1]
 gi|225644475|gb|ACN99525.1| tryptophan tRNA ligase [Sulfurihydrogenibium azorense Az-Fu1]
          Length = 391

 Score = 55.2 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 43/203 (21%), Positives = 70/203 (34%), Gaps = 28/203 (13%)

Query: 174 FNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKLFALTSPLLT- 230
           F Y +L A D + + K     +   G DQ  +I    ++  R       +F     LLT 
Sbjct: 191 FGYPVLMASDIL-IYKAQAVPV---GEDQLPHIEITREIARRFNNLYKPVFVEPKALLTE 246

Query: 231 -----TASGTKMGKTLSGAIWL--NKEMTSPYNFWQYW------RNIDDA----DVVSFA 273
                   G KM K+    I L  ++E  +              ++I       +V S+ 
Sbjct: 247 ASKLLGTDGRKMSKSYGNTIALSDDEEQVNKKVLSMKTDTQRVKKSIPGRPEVCNVFSYH 306

Query: 274 KRLTT-LPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIH 332
           K  T    + +ID   +       E KKI+A  +   +    E  K      +  D  I 
Sbjct: 307 KFFTDQETVKQIDLKCRNAEIGCIECKKILAENLNKFLLPIREKRKELEKDRQLLDKIIR 366

Query: 333 SQHMPTISISK---DEVSRGMGL 352
             +     ++    +EV   MGL
Sbjct: 367 EGNEKAKEVASKTMEEVKEAMGL 389


>gi|195952763|ref|YP_002121053.1| tryptophanyl-tRNA synthetase [Hydrogenobaculum sp. Y04AAS1]
 gi|195932375|gb|ACG57075.1| tryptophanyl-tRNA synthetase [Hydrogenobaculum sp. Y04AAS1]
          Length = 391

 Score = 55.2 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 42/254 (16%), Positives = 82/254 (32%), Gaps = 38/254 (14%)

Query: 84  PSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLRE 143
           P+++D    ++   +I    ++        +        A++ +    +     +D L +
Sbjct: 106 PTYKDTKYNLL---KINHVEKEYSEKLIPLVDILVNHAPAIIEDEA--MFKKVLLDGLTD 160

Query: 144 IGSFFSVNRMLSFE-----SVRSR-LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQM 197
           I     +   +  E     ++  R      +  F  F Y +L A D +    +    +  
Sbjct: 161 IFIKLLIEGAIDKEKLGELNISKRDFYETDTFGF--FGYPVLMASDILIYNAD-GVPV-- 215

Query: 198 GGSDQWGNIICGIDLGERLK--------TPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
            G DQ  +I    ++  R           PK     +P L    G KM K+ +  I +++
Sbjct: 216 -GEDQLPHIEITREIARRFNYLYKEFFKEPKAILTETPKLLGTDGRKMSKSYNNTIMIDE 274

Query: 250 EMTSPYNFWQYWRNIDDAD------------VVSFAKRLTTL-PMSEIDRMAKLQGKEIN 296
                 +         +              V S+ K  T L   S I+   K       
Sbjct: 275 TEEETTSKIMKMFTDPEKLRKNDPGHPEKCNVFSYHKIFTNLAETSNIELDCKSGKLGCV 334

Query: 297 EAKKIIATEITTMV 310
           E KKI+A  +   +
Sbjct: 335 ECKKILAKNLNNFL 348


>gi|24213108|ref|NP_710589.1| tryptophanyl-tRNA synthetase [Leptospira interrogans serovar Lai
           str. 56601]
 gi|24193811|gb|AAN47607.1| tryptophanyl-tRNA synthetase [Leptospira interrogans serovar Lai
           str. 56601]
          Length = 322

 Score = 55.2 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 35/226 (15%), Positives = 72/226 (31%), Gaps = 41/226 (18%)

Query: 41  GYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           G   +   LH G+    +  L   Q +       +    S+    S   E +R      +
Sbjct: 6   GVQPSGK-LHLGNFFSVIRKLKEYQDS-TDLFCFIADLHSLTTFSS--KEKQRENTFNAV 61

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRML----S 155
            + +          +     +    + ++   +  + +      +  F SVN++      
Sbjct: 62  CDFLA---------LGIDPDRCTFWLQSSVPEVTELAWY-----LSHFISVNQLSLAHSY 107

Query: 156 FESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER 215
            + V         L    F Y +L A D +    +   R+ +G  DQ  ++    D+   
Sbjct: 108 KDKVAKGFHPGGGL----FFYPVLMAADILGFDSD---RVPVG-KDQKQHLEFARDIAST 159

Query: 216 LKTP--KLFAL-------TSPLLTTASGTKMGKTLSGAI-WLNKEM 251
                  +F +       T+ L+    G KM K+    I + + E 
Sbjct: 160 FNREVGPVFKIPEPEIDETTALVPGVDGQKMSKSYGNTINFFDSEK 205


>gi|45656260|ref|YP_000346.1| tryptophanyl-tRNA synthetase [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|45599494|gb|AAS68983.1| tryptophanyl-tRNA synthetase [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
          Length = 322

 Score = 55.2 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 35/226 (15%), Positives = 72/226 (31%), Gaps = 41/226 (18%)

Query: 41  GYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           G   +   LH G+    +  L   Q +       +    S+    S   E +R      +
Sbjct: 6   GVQPSGK-LHLGNFFSVIRKLKEYQDS-TDLFCFIADLHSLTTFSS--KEKQRENTFNAV 61

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRML----S 155
            + +          +     +    + ++   +  + +      +  F SVN++      
Sbjct: 62  CDFLA---------LGIDPDRCTFWLQSSVPEVTELAWY-----LSHFISVNQLSLAHSY 107

Query: 156 FESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER 215
            + V         L    F Y +L A D +    +   R+ +G  DQ  ++    D+   
Sbjct: 108 KDKVAKGFHPGGGL----FFYPVLMAADILGFDSD---RVPVG-KDQKQHLEFARDIAST 159

Query: 216 LKTP--KLFAL-------TSPLLTTASGTKMGKTLSGAI-WLNKEM 251
                  +F +       T+ L+    G KM K+    I + + E 
Sbjct: 160 FNREVGPVFKIPEPEIDETTALVPGVDGQKMSKSYGNTINFFDSEK 205


>gi|311113024|ref|YP_003984246.1| tryptophan--tRNA ligase [Rothia dentocariosa ATCC 17931]
 gi|310944518|gb|ADP40812.1| tryptophan--tRNA ligase [Rothia dentocariosa ATCC 17931]
          Length = 354

 Score = 55.2 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 54/322 (16%), Positives = 109/322 (33%), Gaps = 55/322 (17%)

Query: 21  ISNPRELDILCSQG----VVTAYIGYDLTASSLHAGHLTQLML--LFWLQKTGHKPISLM 74
           +S+ ++ D           V  Y G   +A S+H G+    +   +   +   ++ +  +
Sbjct: 1   MSDEKKQDKSLIPNASLDRVRVYSGAQPSADSMHLGNYIGAVNNWVALQEDPANECLFFI 60

Query: 75  GGGTSII--GDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL 132
               +I    DP    E  R+  +Q I   I+  +  F    +       A +LN  T  
Sbjct: 61  PDMHAITVPQDPQSLRERTRLTAAQYIAAGIDPARSPFFVQSQVPEHAQLAWVLNCFTGF 120

Query: 133 CSIKYIDLLREIGSFFSVNRMLS-FESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
                             +RM    +  + +     S+    F Y +L A D + L +  
Sbjct: 121 GE---------------ASRMTQFKDKSQKQGADNASVGL--FTYPVLMAADIL-LYQVD 162

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKT--PKLFALTSPLLTTASGT---------KMGKT 240
              +   G DQ  ++    +L +R  +   + F +  P++   +           KM K+
Sbjct: 163 GVPV---GEDQRQHLELTRNLAQRFNSRFGETFVVPEPIIVKETAKIYDLQEPTSKMSKS 219

Query: 241 LSGAIWLNKEMTSPYNFWQYWRN--IDDADVVSF-----------AKRLTTLPMSEIDRM 287
            +    L K +  P    +  ++   DD  V+++               + +    ID +
Sbjct: 220 AASDKGLIKLLDEPKATVKKIKSAVTDDGSVIAYDREAKPGVSNLLSIYSAMTGESIDSL 279

Query: 288 AKL-QGKEINEAKKIIATEITT 308
            K  +GK     K  +A  +  
Sbjct: 280 VKRYEGKMYGHLKVDLADVVVE 301


>gi|308488674|ref|XP_003106531.1| hypothetical protein CRE_15979 [Caenorhabditis remanei]
 gi|308253881|gb|EFO97833.1| hypothetical protein CRE_15979 [Caenorhabditis remanei]
          Length = 431

 Score = 55.2 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 60/336 (17%), Positives = 110/336 (32%), Gaps = 62/336 (18%)

Query: 11  ILSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
           ++  RG      +    LD          Y G   ++ SLH GHL   +   WLQ+    
Sbjct: 90  VMLRRGMFFAHRDFTSILDCKEKGEPFFLYTGRGASSGSLHLGHLVPFIFTKWLQEVFDV 149

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
           P+ +              D+ + + +   +    +  +      I  G   T   + NN 
Sbjct: 150 PLIV-----------QMTDDEKFLWKDMTVDAAKKMSRENMKDIISVGFDLTKTFIFNNF 198

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY-----DF 184
            ++C   Y ++++    + +VN   +          E  +    F    ++A       F
Sbjct: 199 DYMCPPFYENIVKI---WKAVNGNQTRSIFG--FTPEDCMGKAAF--PAVEAAPCFASSF 251

Query: 185 VELAKNYD------CRLQMGGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTASGT 235
             +           C +     DQ        D+  +LK  K   +F+   P L  A  T
Sbjct: 252 PHIFGEKGKKNDIPCLIPC-AIDQDPYFRMCRDVAPKLKASKPSLIFSTFLPALQGAQ-T 309

Query: 236 KMGKTLSGA-IWLN------KEMTSPYNFWQYWRNID---------DADV-VSFAKRL-- 276
           KM  +     I+L+      K   + Y F    + I+         D D+   F +    
Sbjct: 310 KMSSSEPNTCIFLDDTPKQIKNKINKYAFSGGQKTIEEHRAKGGNCDVDISFQFLRFFLE 369

Query: 277 TTLPMSEIDRM--------AKLQGKEINEAKKIIAT 304
             + + +I            +L+ +   E +KIIA 
Sbjct: 370 DDVELEKIREQYTKGELLSGELKARATVEVQKIIAE 405


>gi|16081625|ref|NP_393988.1| tyrosyl-tRNA synthetase [Thermoplasma acidophilum DSM 1728]
 gi|74557886|sp|Q9HKT3|SYY_THEAC RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|10639680|emb|CAC11652.1| probable tyrosyl-tRNA synthetase [Thermoplasma acidophilum]
          Length = 332

 Score = 55.2 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 45/241 (18%), Positives = 88/241 (36%), Gaps = 30/241 (12%)

Query: 21  ISNPRELDILCSQGVVTAYIGYDLTA-SSLHAGHLTQL-MLLFWLQKTGHKPISLMGGGT 78
           ++       L  +  + +YIG + +     H          L  +Q    K   L+    
Sbjct: 15  VTREDAER-LEGKSDIKSYIGIEPSGIP--HIATAVMWPRKLAEIQD-DIKVTVLLADWH 70

Query: 79  SIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYI 138
           ++I +    D          I++  E ++  F +      G T A  +     + S +Y 
Sbjct: 71  AMINNKLHGD-------LDLIRKGGEILRKTFQA-----EGLTKADYVWASDLVDSSEYW 118

Query: 139 DLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMG 198
            +  +     ++ R++    +  R + +    F  + Y I+Q  D   L    D  +  G
Sbjct: 119 RMFIDTAKRSTLKRVIRSLPIMGRNETDAEKDFSMYLYPIMQVTDIFYL----DVDMAFG 174

Query: 199 GSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-------TKMGKTLSG-AIWLNKE 250
           G DQ    +   D+ E++K  K+ ++   LL++  G        KM K+    AI +   
Sbjct: 175 GMDQRHAHMLARDIAEKMKRKKVVSVHGFLLSSLKGNARMDNFVKMSKSDPNSAILVTDH 234

Query: 251 M 251
           M
Sbjct: 235 M 235


>gi|291298422|ref|YP_003509700.1| tryptophanyl-tRNA synthetase [Stackebrandtia nassauensis DSM 44728]
 gi|290567642|gb|ADD40607.1| tryptophanyl-tRNA synthetase [Stackebrandtia nassauensis DSM 44728]
          Length = 344

 Score = 55.2 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 52/297 (17%), Positives = 96/297 (32%), Gaps = 49/297 (16%)

Query: 41  GYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRD-ESRRMMRSQE 98
           G   TA S H G+    L     +Q T H     +    +I  D   +    R  + + +
Sbjct: 19  GIQPTADSFHLGNYLGALRNWVAMQDT-HDAFYCVVDLHAITVDHDPKLLRKRSRIAAAQ 77

Query: 99  IQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
           +      I    S+           ++    +W+              F    RM     
Sbjct: 78  LLAV--GIDPARSTLFVQSQVPEHPML----SWILECHT--------GFGEAGRMTQ--- 120

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
            + +  + + +S   F Y ILQA D + L +     +   G DQ  ++    DL +R  T
Sbjct: 121 FKDKSAKNERVSVGLFTYPILQAADIL-LYRADAVPV---GEDQRQHLELSRDLAQRFNT 176

Query: 219 PKLFALTSPL--LTTASGT---------KMGKTLSGAIWLNKEMTSPYNFWQYWRN---- 263
                 T P   +  A+GT         KM K+ S    +   +  P    +  ++    
Sbjct: 177 KYGNVFTVPEAHIIKATGTIQDLTEPARKMSKSNSQPAGIIDLLDDPNRIRKKIKSAVTD 236

Query: 264 -----IDDAD----VVSFAKRLTTLPMSEIDRMAKL-QGKEINEAKKIIATEITTMV 310
                + D +    V +     ++L  + I+ +          + KK +A  +    
Sbjct: 237 TGREIVFDPENKPGVSNLLTIYSSLTETSIEELQNRYADSGYGDFKKDLAEIVADFC 293


>gi|328955260|ref|YP_004372593.1| tryptophanyl-tRNA synthetase [Coriobacterium glomerans PW2]
 gi|328455584|gb|AEB06778.1| tryptophanyl-tRNA synthetase [Coriobacterium glomerans PW2]
          Length = 349

 Score = 55.2 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 45/244 (18%), Positives = 73/244 (29%), Gaps = 35/244 (14%)

Query: 22  SNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGG--- 77
           S   E D+       T   G   T   LH GH    + L   LQ  G +   L+      
Sbjct: 14  SEEIEADLAVHPRRYTMLTGDRPTGR-LHLGHYLGSLKLRVELQDMGVRTSVLIADYQVI 72

Query: 78  TSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKY 137
           T        +D  R M     + + +        + I   +    A          +   
Sbjct: 73  TDRDTTEHIQDNVRNM-----VIDYLACGIDPAKTMIYTHSAVPAA----------NQLI 117

Query: 138 IDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQM 197
           +  L  +     +        +         L+ L   Y + Q+ D   L    +     
Sbjct: 118 LPFLSLVSEAELLRNPTVKAEMA---ASGHELTGLLLTYPVHQSCD--ILFCKGNIV--P 170

Query: 198 GGSDQWGNIICGIDLGERLKT------PKLFAL--TSPLLTTASGTKMGKTLSGAIWLNK 249
            G DQ  +I     +  R         P++ AL  + P+L    G KM K+   AI L+ 
Sbjct: 171 VGRDQLPHIELTRSIARRFNKRYRKIFPEVDALLSSVPVLPGLDGRKMSKSYGNAIALSM 230

Query: 250 EMTS 253
           +   
Sbjct: 231 DADE 234


>gi|302392435|ref|YP_003828255.1| tryptophanyl-tRNA synthetase [Acetohalobium arabaticum DSM 5501]
 gi|302204512|gb|ADL13190.1| tryptophanyl-tRNA synthetase [Acetohalobium arabaticum DSM 5501]
          Length = 328

 Score = 55.2 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 54/322 (16%), Positives = 99/322 (30%), Gaps = 52/322 (16%)

Query: 41  GYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           G   T   LH GHL   L     LQ   +     +    ++      + E  +  R + +
Sbjct: 10  GMRPTGK-LHLGHLIGVLNNWKDLQD-DYDCTFGVVDWHALTTKYD-QTEDIKQNRREMV 66

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
            + I        S I   +   +   L+          + +L  +     +      + V
Sbjct: 67  IDWISAGIDPDKSIIYVQSDIPEIAELH--------LLLSMLVSVSRLERL--PTYKDQV 116

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
           R  L+ + S+ F    Y IL A D +    +    + +G  DQ  +I    ++  R    
Sbjct: 117 RE-LEVKDSVPFGLLEYPILMAADILIHKAD---TIPVG-EDQLPHIEITREIARRFN-- 169

Query: 220 KLFALTSP----------LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYW------RN 263
            L+  T P           L    G KM K+   AI+L  E     +             
Sbjct: 170 HLYGETFPEPEPKLGEVPKLLGLDGRKMSKSYGNAIYLADEKEEIGDKVNQMVTDPERIR 229

Query: 264 IDDA------DVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAE 317
           +DD        V  +     +  + EI    K       + K  +   +T  +       
Sbjct: 230 LDDPGHPEVCSVYDYHGIFNSEEVDEIKVNCKNADLGCRDCKVRLTEVLTDYL------- 282

Query: 318 KAATAAMECFDMSIHSQHMPTI 339
             A    +  ++  + + +  I
Sbjct: 283 --ADIHKKRAELEENPEMIDEI 302


>gi|258574691|ref|XP_002541527.1| tyrosyl-tRNA synthetase [Uncinocarpus reesii 1704]
 gi|237901793|gb|EEP76194.1| tyrosyl-tRNA synthetase [Uncinocarpus reesii 1704]
          Length = 409

 Score = 55.2 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/227 (14%), Positives = 76/227 (33%), Gaps = 20/227 (8%)

Query: 18  IHQISNPRELDILC--SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMG 75
           + ++  P  L+ +       +T Y G   T    H G+   ++ L    + G     L+ 
Sbjct: 18  LQEVLKPEILEDVIVRQNRPLTIYWGTATTGRP-HCGYFVPIVKLAHFLRAGCHIKILLA 76

Query: 76  GGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK--YGTGKTDALMLNNETWLC 133
                + +             + +    +  + + ++ ++  +        +L +   L 
Sbjct: 77  DIHGFLDNLKA--------PIELVNFRADYYRYVITALLEAVHVPTDKLEFVLGSSYQLS 128

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDC 193
           +   +DL R        +   +   V  +++           Y ++QA D   L      
Sbjct: 129 AKYTMDLFRLSSVVTEHDAKKAGAEVVKQVENA---VLSGLIYPLMQALDEEHL----GV 181

Query: 194 RLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
             Q GG DQ       ++   R+   +   L +P++   +G KM  +
Sbjct: 182 DAQFGGVDQRKIFTLAMETLPRIGYKERAHLMNPMVPGLAGGKMSAS 228


>gi|309807341|ref|ZP_07701310.1| tyrosine--tRNA ligase domain protein [Lactobacillus iners LactinV
           03V1-b]
 gi|308166323|gb|EFO68533.1| tyrosine--tRNA ligase domain protein [Lactobacillus iners LactinV
           03V1-b]
          Length = 57

 Score = 55.2 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 7/45 (15%), Positives = 18/45 (40%)

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFG 407
            S  +AR  + + AI +N +   +    + + +      + +  G
Sbjct: 3   KSKRQAREDINNGAIYVNGTRQDDCDFLVDVPNSFEGKFVIIRRG 47


>gi|283458669|ref|YP_003363304.1| tryptophanyl-tRNA synthetase [Rothia mucilaginosa DY-18]
 gi|283134719|dbj|BAI65484.1| tryptophanyl-tRNA synthetase [Rothia mucilaginosa DY-18]
          Length = 371

 Score = 55.2 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 55/322 (17%), Positives = 109/322 (33%), Gaps = 51/322 (15%)

Query: 21  ISNPRELDILC----SQGVVTAYIGYDLTASSLHAGHLT-QLMLLFWLQKT-GHKPISLM 74
           +++ ++ D       SQ     Y G   +A S+H G+    +     LQ    ++ +  +
Sbjct: 18  MADEKKQDKSLIPNASQQKARIYSGAQPSADSMHLGNYIGAVNNWVALQDDPNNECLFFI 77

Query: 75  GGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCS 134
               + I  P   +E R   R    Q     I    +           A +     W   
Sbjct: 78  PDMHA-ITVPQNPEELRERTRLTAAQYIASGIDPTRTPLFVQSHVPEHAQLA----W--- 129

Query: 135 IKYIDLLREIGSFFSVNRMLS-FESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDC 193
                +L     F   +RM    +  + +     S+    F Y IL A D + L +    
Sbjct: 130 -----VLNCFTGFGEASRMTQFKDKSQKQGAENASVGL--FTYPILMAADIL-LYQVDGV 181

Query: 194 RLQMGGSDQWGNIICGIDLGERLKT--PKLFALTSPLLTTASGT---------KMGKTLS 242
            +   G DQ  ++    +L +R  +   + F +  P++   +           KM K+ +
Sbjct: 182 PV---GEDQRQHLELTRNLAQRFNSRFGETFVVPEPVILKETAKIYDLQDPTSKMSKSAA 238

Query: 243 GAIWLNKEMTSPYNFWQYWRN--IDDADVVSF-----------AKRLTTLPMSEIDRM-A 288
               L K + +P    +  ++   DD  V+++               + +    ID + A
Sbjct: 239 TDKGLIKLLDTPKATQKKIKSAVTDDGSVIAYDREAKPGVSNLLSIYSAMTGESIDEIVA 298

Query: 289 KLQGKEINEAKKIIATEITTMV 310
           + +GK     K  +A  +   +
Sbjct: 299 RYEGKMYGHLKVDLADIVVERL 320


>gi|319956401|ref|YP_004167664.1| tryptophanyl-tRNA synthetase [Nitratifractor salsuginis DSM 16511]
 gi|319418805|gb|ADV45915.1| tryptophanyl-tRNA synthetase [Nitratifractor salsuginis DSM 16511]
          Length = 320

 Score = 55.2 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/215 (14%), Positives = 72/215 (33%), Gaps = 32/215 (14%)

Query: 41  GYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           G   +   LH G+    +  +  LQK  H+  + +    ++ G    +    +    +  
Sbjct: 6   GIQPSGK-LHIGNYFGAIAQMLKLQKE-HELFAFIANYHALSGGADLK--ELKQNTFEVA 61

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
            + +          +     KT   + ++   +  + +I     +  +  V  +    S 
Sbjct: 62  VDFLA---------LGIDPDKTVFWVQSHAKEVLELYWI-----LSRYTPVGLLERAHSY 107

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
           + ++ +  + S   F+Y +L A D + L       +   G DQ  ++    D+  +    
Sbjct: 108 KDKVAKGIAPSHALFSYPVLMAADIL-LYDAQKVPV---GKDQIQHLEMTRDIAIKFNNE 163

Query: 220 KLFALTSP---------LLTTASGTKMGKTLSGAI 245
                T P         ++    G KM K+    I
Sbjct: 164 HGEIFTIPEAMVEESVAVVPGIDGAKMSKSYGNTI 198


>gi|241954452|ref|XP_002419947.1| cytoplasmic tyrosyl-tRNA synthetase, putative [Candida dubliniensis
           CD36]
 gi|223643288|emb|CAX42162.1| cytoplasmic tyrosyl-tRNA synthetase, putative [Candida dubliniensis
           CD36]
          Length = 407

 Score = 55.2 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 36/236 (15%), Positives = 77/236 (32%), Gaps = 29/236 (12%)

Query: 18  IHQISNPRELDILCSQG--VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMG 75
           + +  N + +  +  +    V  Y G   T    H G+   ++ L    K G +   L+ 
Sbjct: 18  LQETLNGQIIKDVLEKENRPVKIYWGTAPTGKP-HCGYFVPMIKLAHFLKAGCEVTVLLA 76

Query: 76  GGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSI 135
              + +      D  +  +  + +    +  + +  + +K  +       L         
Sbjct: 77  DLHAFL------DNMKAPL--EVVNYRAKYYEFVVKAILK--SINVPIERLKFVVGSSYQ 126

Query: 136 KYIDLLREIGSFFSVNRMLSFESVRSRLKRE------QSLSFLEFNYMILQAYDFVELAK 189
           K  D + ++   F ++ ++S      R   +        L      Y ++QA D   L  
Sbjct: 127 KGGDYVMDL---FKLSNIVSQND-AKRAGADVVKQVANPL-LSGLIYPLMQAIDEEHL-- 179

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTAS-GTKMGKTLSGA 244
                 Q GG DQ    +   +    +   K   L +P++     G KM  +   +
Sbjct: 180 --GVDAQFGGVDQRKIFVLAEENLPSIGYKKRAHLMNPMVPGLGQGGKMSASDPNS 233


>gi|291446017|ref|ZP_06585407.1| tryptophanyl-tRNA synthetase [Streptomyces roseosporus NRRL 15998]
 gi|291348964|gb|EFE75868.1| tryptophanyl-tRNA synthetase [Streptomyces roseosporus NRRL 15998]
          Length = 383

 Score = 54.8 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 38/220 (17%), Positives = 69/220 (31%), Gaps = 30/220 (13%)

Query: 44  LTASSLHAGHLTQ-LMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN 102
            T + LH GH    L     LQ  G   I L+                  +      +  
Sbjct: 69  PTGA-LHLGHYFGSLRNRVRLQDLGVDVIVLIPDYQV-------------ITDRDTAERL 114

Query: 103 IEKIKGIFSSFIKYG-TGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
            E   G+   ++  G       +  ++     +   +  L  +            + +  
Sbjct: 115 AEYTDGLLLDYLALGIDPARSTVFCHSAVPALNQLMLPFLSLVSVAELNRNPTVKDEIA- 173

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--P 219
              R+ ++S L   Y + QA D +    N    L   G DQ  ++     +  R      
Sbjct: 174 -HSRQSTVSGLMLTYPVHQAADILSCKGN----LVPVGRDQAPHLEVTRTIARRFNERYG 228

Query: 220 KLF------ALTSPLLTTASGTKMGKTLSGAIWLNKEMTS 253
           ++F         +PLL    GTKM K+ + ++ L+     
Sbjct: 229 QVFPEPDILLSAAPLLLGTDGTKMSKSRANSVPLSATADE 268


>gi|239942558|ref|ZP_04694495.1| putative tryptophanyl-tRNA synthetase [Streptomyces roseosporus
           NRRL 15998]
 gi|239989020|ref|ZP_04709684.1| putative tryptophanyl-tRNA synthetase [Streptomyces roseosporus
           NRRL 11379]
          Length = 345

 Score = 54.8 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 38/220 (17%), Positives = 69/220 (31%), Gaps = 30/220 (13%)

Query: 44  LTASSLHAGHLTQ-LMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN 102
            T + LH GH    L     LQ  G   I L+                  +      +  
Sbjct: 31  PTGA-LHLGHYFGSLRNRVRLQDLGVDVIVLIPDYQV-------------ITDRDTAERL 76

Query: 103 IEKIKGIFSSFIKYG-TGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
            E   G+   ++  G       +  ++     +   +  L  +            + +  
Sbjct: 77  AEYTDGLLLDYLALGIDPARSTVFCHSAVPALNQLMLPFLSLVSVAELNRNPTVKDEIA- 135

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--P 219
              R+ ++S L   Y + QA D +    N    L   G DQ  ++     +  R      
Sbjct: 136 -HSRQSTVSGLMLTYPVHQAADILSCKGN----LVPVGRDQAPHLEVTRTIARRFNERYG 190

Query: 220 KLF------ALTSPLLTTASGTKMGKTLSGAIWLNKEMTS 253
           ++F         +PLL    GTKM K+ + ++ L+     
Sbjct: 191 QVFPEPDILLSAAPLLLGTDGTKMSKSRANSVPLSATADE 230


>gi|313673527|ref|YP_004051638.1| tryptophanyl-tRNA synthetase [Calditerrivibrio nitroreducens DSM
           19672]
 gi|312940283|gb|ADR19475.1| tryptophanyl-tRNA synthetase [Calditerrivibrio nitroreducens DSM
           19672]
          Length = 326

 Score = 54.8 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 59/301 (19%), Positives = 90/301 (29%), Gaps = 57/301 (18%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKT--GHKPISLMGGG---TSIIGDPSFRDESRRMMR 95
           G   T   LH GH      L    K    +     +      T+   +P    E RR M 
Sbjct: 7   GMRPTGR-LHIGHYFG--ALKNWVKLQDNYDCYYFIADWHALTTNFENPENIKELRREML 63

Query: 96  SQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLS 155
              +   I+  +       K                  +I + +L   +     V   L 
Sbjct: 64  LDWLSVGIDINRSTLFIQSK------------------NIYHAELFLLLSMITPVGW-LE 104

Query: 156 FESVRSRLKRE---QSLSFLEFN-YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGID 211
                  LK E   + LS L F  Y +LQ  D +  +  Y   + +G  DQ  +I    +
Sbjct: 105 RCPTYKELKTEITDRDLSCLGFLGYPVLQTADIIMYSAKY---VPVG-VDQLPHIEISRE 160

Query: 212 LGERLKT--------PKLFALTS-PLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYW- 261
           +  R                LT  P L    G KM K+   AI L  ++ +  +      
Sbjct: 161 IVRRFHHLYGCDIFVEPEGLLTDVPKLLGLDGRKMSKSYGNAIMLTDDLKTVESNILKMV 220

Query: 262 ------RNIDDAD-----VVSFAKRLTTLP-MSEIDRMAKLQGKEINEAKKIIATEITTM 309
                 R  D  D     V  + K  +      EI    K       + K+I+   I   
Sbjct: 221 TDTNRKRRTDPGDPSVCPVFDYHKVFSLESERDEIVEGCKGAKIGCIDCKRILLKHIIEF 280

Query: 310 V 310
           +
Sbjct: 281 L 281


>gi|171915494|ref|ZP_02930964.1| tryptophanyl-tRNA synthetase [Verrucomicrobium spinosum DSM 4136]
          Length = 321

 Score = 54.8 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 47/308 (15%), Positives = 96/308 (31%), Gaps = 47/308 (15%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSI--IGDPSFRDESRRMMRSQE 98
           G   T   LH G+   +M      +   +    +    S+  I D     E+ R +    
Sbjct: 6   GLQPTGR-LHLGNYFGMMQPSLQLQHEGEAYYFIANYHSLTSIQDAKVLRENVRNLAVDF 64

Query: 99  IQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
           +   ++  K +F            A +      L ++  + +L    S+         + 
Sbjct: 65  LACGLDPEKAVFFRQSDMPEHTELAWI------LSTVTPMPMLENCHSY--------KDK 110

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
           V +       L    F Y +L A D +    +   R+ +G  DQ  ++    D+  ++  
Sbjct: 111 VANGFTPNHGL----FAYPVLMAADILIYDSD---RVPVG-KDQKQHLEVTRDIATKINL 162

Query: 219 PKLFALT----------SPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRN----- 263
                            + ++    G KM K+ +  I L +E  +     +         
Sbjct: 163 AYGEGTLKVPEALIREDTAVVAGLDGRKMSKSYNNTIGLFEEEKALLTKVKRIITDATPV 222

Query: 264 -----IDDADVVSFAKRL-TTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAE 317
                 DD+ ++   K + T+     +    K  G+   + KK +  +I           
Sbjct: 223 EAPKPTDDSSILKLYKLVATSEEYDALVADFKKGGRGYGDYKKQLFQKIWDFF-AEARDR 281

Query: 318 KAATAAME 325
           +A   A  
Sbjct: 282 RAQIVAQA 289


>gi|68470880|ref|XP_720447.1| hypothetical protein CaO19.2694 [Candida albicans SC5314]
 gi|68471338|ref|XP_720217.1| hypothetical protein CaO19.10209 [Candida albicans SC5314]
 gi|46442073|gb|EAL01365.1| hypothetical protein CaO19.10209 [Candida albicans SC5314]
 gi|46442314|gb|EAL01604.1| hypothetical protein CaO19.2694 [Candida albicans SC5314]
 gi|238881548|gb|EEQ45186.1| tyrosyl-tRNA synthetase [Candida albicans WO-1]
          Length = 409

 Score = 54.8 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 36/236 (15%), Positives = 78/236 (33%), Gaps = 29/236 (12%)

Query: 18  IHQISNPRELDILCSQG--VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMG 75
           + +  N + +  +  +    V  Y G   T    H G+   ++ L    K G +   L+ 
Sbjct: 18  LQETLNGQIIKDVLEKENRPVKIYWGTAPTGKP-HCGYFVPMIKLAHFLKAGCEVTVLLA 76

Query: 76  GGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSI 135
              + +      D  +  +  + ++   +  + +  + +K  +       L         
Sbjct: 77  DLHAFL------DNMKAPL--EVVKYRAKYYEFVVKAILK--SINVPIERLKFVVGSSYQ 126

Query: 136 KYIDLLREIGSFFSVNRMLSFESVRSRLKRE------QSLSFLEFNYMILQAYDFVELAK 189
           K  D + ++   F ++ ++S      R   +        L      Y ++QA D   L  
Sbjct: 127 KGGDYVMDL---FKLSNIVSQND-AKRAGADVVKQVANPL-LSGLIYPLMQAIDEEHL-- 179

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTAS-GTKMGKTLSGA 244
                 Q GG DQ    +   +    +   K   L +P++     G KM  +   +
Sbjct: 180 --GVDAQFGGVDQRKIFVLAEENLPSIGYKKRAHLMNPMVPGLGQGGKMSASDPNS 233


>gi|194903336|ref|XP_001980850.1| GG17386 [Drosophila erecta]
 gi|190652553|gb|EDV49808.1| GG17386 [Drosophila erecta]
          Length = 430

 Score = 54.8 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 59/334 (17%), Positives = 110/334 (32%), Gaps = 48/334 (14%)

Query: 15  RGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +   +  L  QG     Y G   ++ SLH GHL   ++  WLQ+T   P+ +
Sbjct: 95  RGMFFSHRDLHTILTLREQGKPFYLYTGRGPSSGSLHVGHLVPFIMTKWLQETFDVPLVI 154

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                         D+ + + +  ++++ I+  +      +  G       + NN  ++ 
Sbjct: 155 -----------QLTDDEKTLWKDLKVEDAIKLGRENAKDIVAMGFDVNKTFIFNNLEFVG 203

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA-------YDFVE 186
               +       +   + + ++F  V+       S    +  +   QA       + F+ 
Sbjct: 204 KCPAM-----YQNIIRIQKCVTFNQVKGIFGFGDSDIIGKIGFPAAQAAPAISSTFPFIF 258

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKL---FALTSPLLTTASGTKMGKTLSG 243
             K   C +     DQ        D+  RL  PK     +   P L  A  TKM  +   
Sbjct: 259 GNKKVHCLIPC-AIDQDPYFRMTRDVAPRLGYPKCALIHSTFFPALQGAK-TKMSASDQN 316

Query: 244 -AIWLN------KEMTSPYNF---------WQYWRNIDDADV-VSFAKRL--TTLPMSEI 284
            A+++       K   + Y F          +    + + DV     K        + E+
Sbjct: 317 SAVYMTDTPKQIKNKINKYAFSGGRVTVEEHRRLGGVPEVDVSYQLLKFFLEDDAKLEEV 376

Query: 285 DRMAKLQGKEINEAKKIIATEITTMVHGREEAEK 318
                       E KK+    +T +V   + A K
Sbjct: 377 RVAYSKGEMLTGEIKKLAVETLTPIVEQHQAARK 410


>gi|328354225|emb|CCA40622.1| tyrosyl-tRNA synthetase [Pichia pastoris CBS 7435]
          Length = 413

 Score = 54.8 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/232 (13%), Positives = 74/232 (31%), Gaps = 21/232 (9%)

Query: 18  IHQISNPRELDILCSQG--VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMG 75
           + ++ NP+ +  +  +    +  Y G   T    H G+   +  L    K G +   L+ 
Sbjct: 28  LQEVLNPQIIKDVLEKEKRPLKLYWGTAPTGRP-HCGYFVPMTKLAHFLKAGCEVKVLLA 86

Query: 76  GGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK--YGTGKTDALMLNNETWLC 133
              + +      D  +  +  + +    +  + +  + ++      +    +  +   L 
Sbjct: 87  DLHAYL------DNMKAPL--EVVAYRAKYYEFVIKAILRSINVPIEKLTFVTGSSYQLT 138

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDC 193
               +D+ R   S    +   +   V  ++            Y ++QA D   L      
Sbjct: 139 PEYTMDIFRISNSVSQNDAKRAGADVVKQVANPL---LSGLIYPLMQALDEEHLK----V 191

Query: 194 RLQMGGSDQWGNIICGID-LGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             Q GG DQ    +   + L       +   +   +   A G KM  +   +
Sbjct: 192 DAQFGGVDQRKIFVLAEENLQSLGYKKRAHLMNPMVPGLAQGGKMSASDPNS 243


>gi|300123513|emb|CBK24785.2| unnamed protein product [Blastocystis hominis]
          Length = 537

 Score = 54.8 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 45/359 (12%), Positives = 104/359 (28%), Gaps = 44/359 (12%)

Query: 18  IHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGG 77
           + ++    EL  +     +  Y G   T    H G+   +  +      G +   L    
Sbjct: 30  LQEVDGAEELKEILKTRDLKIYWGTSPTGRP-HIGYFVPMSKIGDFLIAGCEVTILFADL 88

Query: 78  TSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK-YGTGKTDALMLNNETW-LCSI 135
            + +   + +         + ++   E    +    ++  G        +    + L + 
Sbjct: 89  HAYL--DNMKS------SWELLKFRTEYYIRVIKGMLRSLGIPLDKLKFVTGSDYQLSAD 140

Query: 136 KYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRL 195
             +D+ R        + + +   V  ++   +        Y  LQA D   L        
Sbjct: 141 YTLDMYRLSSLVTEHDAIKAGAEVVKQVANPK---ISGILYPELQALDEEYLH----VDA 193

Query: 196 QMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI--WLNKEMTS 253
           Q GG+DQ    +       ++       L + ++    G KM  +   +    ++   T 
Sbjct: 194 QFGGTDQRKIFMFAKKYLPKIGYQPRIHLMNFMVPGLVGEKMSSSEENSKIDLIDDSKTV 253

Query: 254 PYNFWQYW---RNIDDADVVSFAKRLTT----LPM-----------------SEIDRMAK 289
                  +    N++   V+SFAK +      LP                   E+++   
Sbjct: 254 LRKIRTAFCEPGNVEKNGVLSFAKMVLFHIVELPFVVDRPEKYGGKQVFNTPEEMEQAFA 313

Query: 290 LQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSR 348
            Q     + K+ +A  +  ++     +     +    F         P    +   +  
Sbjct: 314 AQELSPQDLKEAVAKYLNLLLDPIRASFDNQESRDLVFKAYGTKLKAPQSEDATPALPA 372


>gi|300088125|ref|YP_003758647.1| tryptophanyl-tRNA synthetase [Dehalogenimonas lykanthroporepellens
           BL-DC-9]
 gi|299527858|gb|ADJ26326.1| tryptophanyl-tRNA synthetase [Dehalogenimonas lykanthroporepellens
           BL-DC-9]
          Length = 325

 Score = 54.8 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 44/348 (12%), Positives = 113/348 (32%), Gaps = 54/348 (15%)

Query: 35  VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMM 94
               + G   T   +H G+    +  +   +  +  I  +    +             + 
Sbjct: 3   KKRVFSGIRPTGR-IHLGNYLGAVQNYVAMQEEYDCIYSVVDIHA-------------LT 48

Query: 95  RSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRML 154
             ++     + ++      +  G      ++          + ++L   +G    ++ +L
Sbjct: 49  TLEDTHLLKDNVREQVIDLLAAGLDPEKCILFVQSH---VPEVMELFTLLGMATPLSWLL 105

Query: 155 SFESVRSRLKRE-QSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLG 213
              + + +++++  ++++    Y +L   D + L K     +   G DQ  ++    ++ 
Sbjct: 106 RVPTFKEKVRQQPHNVNYGLVGYPVLMTAD-IVLYKAEAIPV---GEDQLPHLELAREIV 161

Query: 214 ERLKT-------PKLFALT-SPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRN- 263
            R               LT  P++    G  KM K+L+  I   +   +P    +   + 
Sbjct: 162 RRFNDHFGPVFPEPQGKLTNFPMVVGLDGRDKMSKSLNNHI---ELAATPEETLKKVMSA 218

Query: 264 IDDA--------------DVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTM 309
           + D               +V    +  +   +  I    +   +   + KK +   I   
Sbjct: 219 VTDPARRLRTDPGHPEVCNVYKLHRHFSPTTVDAIAEECRAASRGCVDCKKQLGGAINEY 278

Query: 310 VHGREEAEKAATAAMECFDMSIHSQHMPTIS----ISKDEVSRGMGLL 353
           +     A +A  AA + +   + ++          ++  EV   MGLL
Sbjct: 279 L-APLRARRAEIAADQDYVDRVIAEGAAKAQAIARVTITEVKEKMGLL 325


>gi|313112973|ref|ZP_07798616.1| tryptophan--tRNA ligase [Faecalibacterium cf. prausnitzii KLE1255]
 gi|310624693|gb|EFQ08005.1| tryptophan--tRNA ligase [Faecalibacterium cf. prausnitzii KLE1255]
          Length = 353

 Score = 54.8 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 41/236 (17%), Positives = 72/236 (30%), Gaps = 35/236 (14%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGH--KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +     LQ +G   +   ++    ++  +    ++ R+ +    + 
Sbjct: 11  PTGR-LHVGHYVGSLKERVRLQNSGEYDEIYVMIADAQALTDNADNPEKVRQNILQVALD 69

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
                I             KT   + +    L  + +  +     S    N  +  E   
Sbjct: 70  YLACGI----------DPAKTHIFIQSMVPELTELSFYYMNLVTVSRLQRNPTVKSEIHM 119

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQW------------GNIIC 208
              +    + F  F Y I QA D           +  G  DQ              N + 
Sbjct: 120 RNFETSIPVGF--FCYPISQAADITAFYA---TTVPAG-EDQKPMIEQCCEIVRKFNAVY 173

Query: 209 GIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNI 264
           G  L E        A    L  T    KM K+L   I+L++E   P +  +   ++
Sbjct: 174 GDTLTEPEIVLPQNAACLRLPGTDGKAKMSKSLGNCIYLSEE---PEDIKKKVMSM 226


>gi|152979774|ref|YP_001352535.1| tryptophanyl-tRNA synthetase II [Janthinobacterium sp. Marseille]
 gi|151279851|gb|ABR88261.1| tryptophanyl-tRNA synthetase [Janthinobacterium sp. Marseille]
          Length = 344

 Score = 54.8 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 41/219 (18%), Positives = 71/219 (32%), Gaps = 33/219 (15%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
            T   LH GH    +      +  HK   L+    ++       +  R    ++ + E  
Sbjct: 22  PTGP-LHLGHYIGSLKSRLELQDTHKQFILLADTQAMTD-----NVGRHQRVTENVLEVA 75

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR- 162
                +          K+   + +    L  +  + LL  +            E +R R 
Sbjct: 76  LDYLAVG-----IDPEKSTIFIQSQIPELYELSMV-LLNLVTVSRLERNPTIKEEIRLRN 129

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQ------------WGNIICGI 210
            +R+    FL   Y + QA D       +   L   G+DQ              N + G 
Sbjct: 130 FERDIPAGFL--TYPVSQAADITA----FKATLVPVGNDQLPMIEQTNELVRKFNSVVGK 183

Query: 211 DLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
           D+   ++  +L + TS L       KM K+L  +I L  
Sbjct: 184 DI--LVECKELLSATSRLPGIDGKAKMSKSLGNSIALGA 220


>gi|58258349|ref|XP_566587.1| phosphoribosylamidoimidazole-succinocarboxamide synthase
           [Cryptococcus neoformans var. neoformans JEC21]
 gi|57222724|gb|AAW40768.1| phosphoribosylamidoimidazole-succinocarboxamide synthase, putative
           [Cryptococcus neoformans var. neoformans JEC21]
          Length = 824

 Score = 54.8 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 39/227 (17%), Positives = 73/227 (32%), Gaps = 21/227 (9%)

Query: 18  IHQISNPRELDILCSQGVV-TAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGG 76
           + ++++   +  + S+G V  AY G   T    H  +   L+ +      G     L+  
Sbjct: 26  LQEVTSGEVIRKVLSEGKVVKAYWGTAPTGRP-HIAYCVPLLKIADFLTAGVNVKVLLAD 84

Query: 77  GTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA--LMLNNETWLCS 134
             + +               + +Q  ++    +  +        TD    +  +   L  
Sbjct: 85  LHAFLDASKS--------TLETVQYRVKYYSKLLITVFTVLGVPTDKLEFITGSSYQLKP 136

Query: 135 IKYIDLLR-EIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDC 193
              +D+ R    +          + V+   + E  L      Y  LQA D   L    D 
Sbjct: 137 DYTLDVYRFHALTSTREAEHAGADVVK---ESESPL-MSSLLYPGLQALDEQYL----DV 188

Query: 194 RLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
             Q GG DQ    +       +L   K   L + ++   SG KM  +
Sbjct: 189 DFQFGGVDQRKIFMYAATFLPKLGYSKRAHLMNAMVPGLSGGKMSAS 235


>gi|189219721|ref|YP_001940362.1| Tryptophanyl-tRNA synthetase [Methylacidiphilum infernorum V4]
 gi|189186579|gb|ACD83764.1| Tryptophanyl-tRNA synthetase [Methylacidiphilum infernorum V4]
          Length = 323

 Score = 54.8 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 34/235 (14%), Positives = 80/235 (34%), Gaps = 37/235 (15%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSI--IGDPSFRDESRRMMRSQE 98
           G   +   LH G+   ++      +   + +  +    ++  I DP      R+ +R   
Sbjct: 8   GIQPSG-HLHIGNYFGMIKRAIEWQDKAQTLYFIADYHALTSIKDPQ---NLRQYVRKIA 63

Query: 99  IQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
           +      +    S F +  +      +     W+           + S      +    S
Sbjct: 64  MAFLACGLDPAKSIFFRQSSIPEVHELA----WI-----------LSSITPFGLLERSHS 108

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
            + ++ +  S +   F+Y +L A D + L ++    +   G DQ  ++    D+  +   
Sbjct: 109 FKDKIAKGLSPTLALFSYPVLMASDIL-LYQSEIIPV---GQDQKQHLEIARDIAHKFNH 164

Query: 219 --PKLFALTSP-------LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNI 264
              ++F +  P       ++    G KM K+ +  +   +    P  F +   +I
Sbjct: 165 TYGEVFRIPEPDIQEEVAVIPGIDGQKMSKSYNNTL---EIFGDPEEFKRRVMSI 216


>gi|87312359|ref|ZP_01094451.1| tryptophanyl-tRNA synthetase [Blastopirellula marina DSM 3645]
 gi|87284924|gb|EAQ76866.1| tryptophanyl-tRNA synthetase [Blastopirellula marina DSM 3645]
          Length = 322

 Score = 54.8 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 38/192 (19%), Positives = 58/192 (30%), Gaps = 35/192 (18%)

Query: 156 FESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER 215
            + V   L     L    F Y +L A D +     YD  +   GSDQ  +I    DL + 
Sbjct: 108 KDKVSRGLSAGAGL----FTYPVLMAADILA----YDANIVPVGSDQVQHIEVTRDLAQS 159

Query: 216 LKT--PKLFAL-------TSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNI-D 265
                 ++F L       TS  +    G KM K+    I   +         +    I  
Sbjct: 160 FNHQYGEVFVLPQAKMLDTSAKVVGTDGEKMSKSYDNTI---EIFEPAKQMRKKIMRIVT 216

Query: 266 D------------ADVVSFAKRLT-TLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHG 312
           D              +    +        +E+  M +  G      KK +A        G
Sbjct: 217 DSRPMEAPKDPATDHLFQLFQLFAGDEAKAEMAAMYRKGGFGYGTVKKALADAADEYF-G 275

Query: 313 REEAEKAATAAM 324
              A++   AA 
Sbjct: 276 EVRAKREELAAQ 287


>gi|224372207|ref|YP_002606579.1| tryptophanyl-tRNA synthetase [Nautilia profundicola AmH]
 gi|223588533|gb|ACM92269.1| tryptophanyl-tRNA synthetase [Nautilia profundicola AmH]
          Length = 323

 Score = 54.8 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 41/239 (17%), Positives = 78/239 (32%), Gaps = 42/239 (17%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQ--KTGHKPISLMGGGTSIIGDPSFRDESR---RMMR 95
           G   T + LH GH     +L      +  +     +    ++    S + +     + + 
Sbjct: 6   GMRPTGN-LHLGHYIG--VLRNWLELQEKYDTFFFVADWHAL----STKYDEGLDLKELS 58

Query: 96  SQEIQENIEK-IKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRML 154
            + ++E I   I    S+       K  A +         +  I  +  +    +    +
Sbjct: 59  IELVKEWIACGIDPEKSTIFVQSDIKEHAEL------YLVLNMITPVSWLERNPTYKDAM 112

Query: 155 SFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
           +    +   K           Y +LQ  D +     YD  L   G DQ  ++    ++  
Sbjct: 113 AQVEYKD--KNNAGF----LTYPVLQTADIIL----YDANLVPIGEDQKPHLEIAREIVR 162

Query: 215 RLK----TPKLFA-----LT-SPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
           R         +F      LT  P L    G KM K+ + AI+L++   +  + W   R 
Sbjct: 163 RFHYLFKKEDVFVEPKELLTEMPRLPGLDGRKMSKSFNNAIYLDE---TSEDIWAKVRQ 218


>gi|83650193|gb|ABC34257.1| tryptophanyl-tRNA synthetase [Burkholderia thailandensis E264]
          Length = 374

 Score = 54.8 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 45/293 (15%), Positives = 90/293 (30%), Gaps = 45/293 (15%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
            T + LH GH    +      +  H+   L+    ++  +    D+ RR      + E  
Sbjct: 48  PTGA-LHLGHYIGSLKTRIALQQTHRQFILVADTQALTDNAHDPDKVRR-----NVIEVA 101

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR- 162
                +          ++   + +    L  +     L  +            + + +R 
Sbjct: 102 LDYLAVG-----IDPRRSTIAVQSGLPALAELTLF-YLNFVTVARLERNPTIKDEIHARG 155

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT---- 218
             R+    FL   Y + QA D      +    + +G  DQ   I    ++  R+      
Sbjct: 156 FGRDIPAGFL--CYPVAQAADITAFKAD---TVPVG-DDQLPLIEQTNEIVRRINRQAGA 209

Query: 219 ---PKLFALTSPL--LTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYW------RNIDD 266
              P+  AL SP   L    G  KM K+   AI L+    +  +  +          + D
Sbjct: 210 DVLPEASALISPTGRLPGVDGKAKMSKSQGNAIALSSSPDAIADAVRRMYTDPNHLRVSD 269

Query: 267 ------ADVVSFAKRLTTLPMSEIDRMAKLQGKEI---NEAKKIIATEITTMV 310
                   V ++       P  E++R+              K+ +   +  ++
Sbjct: 270 PGTVEGNVVFTYLDAFDDEP-DEVERLKAAYRAGGLGDMALKRRLEDRLQALI 321


>gi|307172597|gb|EFN63956.1| Tryptophanyl-tRNA synthetase, mitochondrial [Camponotus floridanus]
          Length = 740

 Score = 54.8 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 45/269 (16%), Positives = 86/269 (31%), Gaps = 55/269 (20%)

Query: 32  SQGVVTAYIGYDLTASSLHAGHLTQLMLLFW--LQKTGHKPISLMGGG--TSIIGDPSFR 87
           ++     + G   T  S+H G+    +   W   Q TG K +  +      ++  DP   
Sbjct: 394 AKYPKRIFSGIQPTG-SVHLGNYFGAIQ-RWVEFQNTGEKVLCSIADLHSITLSQDPKKL 451

Query: 88  DESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSF 147
            E+  +M +  +   ++  K I     K                     + +L   +G+ 
Sbjct: 452 RENTLLMTATLVACGVDFEKSILFQQSKV------------------PMHTELCWVLGTI 493

Query: 148 FSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNII 207
            ++ R+      + + +  +++    + Y +LQA D + L K     +   G DQ  +I 
Sbjct: 494 TTMARLAHLPQFKEKSESLKNIPLGLYIYPVLQAADIL-LYKATHVPV---GQDQAQHIQ 549

Query: 208 CGIDLGERLKTPKLFALTSPLL--TTASG------------TKMGKTLSGAIWLNKEMTS 253
              DL         F  T P+     + G             KM K+         +  S
Sbjct: 550 LAQDLAHIFNKR--FGQTFPIPHTLISDGPSQRIKSLREPMKKMSKSHK-------DPKS 600

Query: 254 PYNFWQYWRNIDDADVVSFAKRLTTLPMS 282
             N      +  D  +    K +T     
Sbjct: 601 RLNM----LDEPDVLLEKIKKAVTDFTSE 625


>gi|254573694|ref|XP_002493956.1| Cytoplasmic tyrosyl-tRNA synthetase, class I aminoacyl-tRNA
           synthetase [Pichia pastoris GS115]
 gi|238033755|emb|CAY71777.1| Cytoplasmic tyrosyl-tRNA synthetase, class I aminoacyl-tRNA
           synthetase [Pichia pastoris GS115]
          Length = 404

 Score = 54.4 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 32/232 (13%), Positives = 74/232 (31%), Gaps = 21/232 (9%)

Query: 18  IHQISNPRELDILCSQG--VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMG 75
           + ++ NP+ +  +  +    +  Y G   T    H G+   +  L    K G +   L+ 
Sbjct: 19  LQEVLNPQIIKDVLEKEKRPLKLYWGTAPTGRP-HCGYFVPMTKLAHFLKAGCEVKVLLA 77

Query: 76  GGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK--YGTGKTDALMLNNETWLC 133
              + +      D  +  +  + +    +  + +  + ++      +    +  +   L 
Sbjct: 78  DLHAYL------DNMKAPL--EVVAYRAKYYEFVIKAILRSINVPIEKLTFVTGSSYQLT 129

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDC 193
               +D+ R   S    +   +   V  ++            Y ++QA D   L      
Sbjct: 130 PEYTMDIFRISNSVSQNDAKRAGADVVKQVANPL---LSGLIYPLMQALDEEHLK----V 182

Query: 194 RLQMGGSDQWGNIICGID-LGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             Q GG DQ    +   + L       +   +   +   A G KM  +   +
Sbjct: 183 DAQFGGVDQRKIFVLAEENLQSLGYKKRAHLMNPMVPGLAQGGKMSASDPNS 234


>gi|148269568|ref|YP_001244028.1| tryptophanyl-tRNA synthetase [Thermotoga petrophila RKU-1]
 gi|170288244|ref|YP_001738482.1| tryptophanyl-tRNA synthetase [Thermotoga sp. RQ2]
 gi|147735112|gb|ABQ46452.1| tryptophanyl-tRNA synthetase [Thermotoga petrophila RKU-1]
 gi|170175747|gb|ACB08799.1| tryptophanyl-tRNA synthetase [Thermotoga sp. RQ2]
          Length = 328

 Score = 54.4 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 44/221 (19%), Positives = 75/221 (33%), Gaps = 36/221 (16%)

Query: 41  GYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           G   T   LH GHL   L     LQ+ G++    +    ++                 ++
Sbjct: 6   GMRPTGK-LHIGHLVGALENWVKLQEEGNECFYFVADWHAL------------TTHYDDV 52

Query: 100 QENIEKIKGIFSSFIKYG-TGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
            +  E  + +   F+  G   +   + + +       ++ +L        SV+R L    
Sbjct: 53  SKLKEYTRDLVRGFLACGIDPEKSVIFVQS----GVKEHAELALLFSMIVSVSR-LERVP 107

Query: 159 VRSRLKRE---QSLSFLEFN-YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
               +K E   + LS   F  Y +LQA D + + K     +   G DQ  +I    ++  
Sbjct: 108 TYKEIKSELNYKDLSTAGFLIYPVLQAADIL-IYKAEGVPV---GEDQVYHIELTREIAR 163

Query: 215 RLK--------TPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
           R           P+      P L    G KM K+    I L
Sbjct: 164 RFNYLYDEVFPEPEAILSRVPKLPGTDGRKMSKSYGNIINL 204


>gi|15643258|ref|NP_228302.1| tryptophanyl-tRNA synthetase [Thermotoga maritima MSB8]
 gi|7994692|sp|Q9WYW2|SYW_THEMA RecName: Full=Tryptophanyl-tRNA synthetase; AltName:
           Full=Tryptophan--tRNA ligase; Short=TrpRS
 gi|4981003|gb|AAD35577.1|AE001726_11 tryptophanyl-tRNA synthetase [Thermotoga maritima MSB8]
          Length = 328

 Score = 54.4 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 44/221 (19%), Positives = 75/221 (33%), Gaps = 36/221 (16%)

Query: 41  GYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           G   T   LH GHL   L     LQ+ G++    +    ++                 ++
Sbjct: 6   GMRPTGK-LHIGHLVGALENWVKLQEEGNECFYFVADWHAL------------TTHYDDV 52

Query: 100 QENIEKIKGIFSSFIKYG-TGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
            +  E  + +   F+  G   +   + + +       ++ +L        SV+R L    
Sbjct: 53  SKLKEYTRDLVRGFLACGIDPEKSVIFVQS----GVKEHAELALLFSMIVSVSR-LERVP 107

Query: 159 VRSRLKRE---QSLSFLEFN-YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
               +K E   + LS   F  Y +LQA D + + K     +   G DQ  +I    ++  
Sbjct: 108 TYKEIKSELNYKDLSTAGFLIYPVLQAADIL-IYKAEGVPV---GEDQVYHIELTREIAR 163

Query: 215 RLK--------TPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
           R           P+      P L    G KM K+    I L
Sbjct: 164 RFNYLYDEVFPEPEAILSRVPKLPGTDGRKMSKSYGNIINL 204


>gi|93279847|pdb|2G36|A Chain A, Crystal Structure Of Tryptophanyl-Trna Synthetase (Ec
           6.1.1.2) (Tryptophan-Trna Ligase)(Trprs) (Tm0492) From
           Thermotoga Maritima At 2.50 A Resolution
          Length = 340

 Score = 54.4 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 44/221 (19%), Positives = 75/221 (33%), Gaps = 36/221 (16%)

Query: 41  GYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           G   T   LH GHL   L     LQ+ G++    +    ++                 ++
Sbjct: 18  GMRPTGK-LHIGHLVGALENWVKLQEEGNECFYFVADWHAL------------TTHYDDV 64

Query: 100 QENIEKIKGIFSSFIKYG-TGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
            +  E  + +   F+  G   +   + + +       ++ +L        SV+R L    
Sbjct: 65  SKLKEYTRDLVRGFLACGIDPEKSVIFVQS----GVKEHAELALLFSMIVSVSR-LERVP 119

Query: 159 VRSRLKRE---QSLSFLEFN-YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
               +K E   + LS   F  Y +LQA D + + K     +   G DQ  +I    ++  
Sbjct: 120 TYKEIKSELNYKDLSTAGFLIYPVLQAADIL-IYKAEGVPV---GEDQVYHIELTREIAR 175

Query: 215 RLK--------TPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
           R           P+      P L    G KM K+    I L
Sbjct: 176 RFNYLYDEVFPEPEAILSRVPKLPGTDGRKMSKSYGNIINL 216


>gi|152993508|ref|YP_001359229.1| tryptophanyl-tRNA synthetase [Sulfurovum sp. NBC37-1]
 gi|151425369|dbj|BAF72872.1| tryptophanyl-tRNA synthetase [Sulfurovum sp. NBC37-1]
          Length = 319

 Score = 54.4 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 36/209 (17%), Positives = 71/209 (33%), Gaps = 31/209 (14%)

Query: 49  LHAGHLTQLML-LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIK 107
           LH G+    M  +  LQ+  H+  + +    S+             +R   ++  ++ + 
Sbjct: 13  LHIGNYFGAMKPMVELQEE-HELFTFIANYHSLTS-----STDAETLRQNTVEAAVDYLA 66

Query: 108 GIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ 167
                 I     KT   + ++   +  + +I     +  F  +  +    S + ++ +  
Sbjct: 67  ------IGIDPEKTTFWVQSHVPEVLELYWI-----LSKFTPMGLLERAHSYKDKVAKGI 115

Query: 168 SLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSP 227
             S   F+Y +L A D +     YD      G DQ  ++    D+  +         T P
Sbjct: 116 PASHALFSYPVLMAADILL----YDVEKVPVGKDQIQHVEMTRDIAIKFNNEYGELFTLP 171

Query: 228 ---------LLTTASGTKMGKTLSGAIWL 247
                     +    G KM K+   AI L
Sbjct: 172 EHMVAEEVATVPGIDGQKMSKSYGNAIDL 200


>gi|154249571|ref|YP_001410396.1| tryptophanyl-tRNA synthetase [Fervidobacterium nodosum Rt17-B1]
 gi|154153507|gb|ABS60739.1| tryptophanyl-tRNA synthetase [Fervidobacterium nodosum Rt17-B1]
          Length = 327

 Score = 54.4 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 40/221 (18%), Positives = 67/221 (30%), Gaps = 37/221 (16%)

Query: 41  GYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGG---TSIIGDPSFRDESRRMMRS 96
           G   T   +H GH          LQ  GH     +      T+   D S      + +  
Sbjct: 6   GIRPTGK-VHVGHYVGVFENWIKLQNEGHDTFYFIADWHALTTHYEDTSELKHYTKDLAR 64

Query: 97  QEIQENIEKIKGIFSSFIK-YGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLS 155
             I   ++K      S +K +        M+   +WL  +     +++        ++ +
Sbjct: 65  TLIAVGLDKSTLFVQSAVKEHAELMLIFSMVTPLSWLERVPTYKEMKQ--------QLAN 116

Query: 156 FESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER 215
            +                  Y +LQA D + + K     +   G DQ  +I    ++  R
Sbjct: 117 KDL------SNAGF----LMYPVLQAADIL-IYKADGVPV---GEDQVYHIELTREIARR 162

Query: 216 LK---------TPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
                       PK      P L    G KM K+    I L
Sbjct: 163 FNYIFKKEIFPEPKELLSKVPKLLGTDGRKMSKSYGNTIPL 203


>gi|72001474|ref|NP_507683.2| tryptophanyl (W) tRNA Synthetase family member (wrs-1)
           [Caenorhabditis elegans]
 gi|30962537|dbj|BAC76735.1| tryptophanyl-tRNA synthetase (cytosolic) [Caenorhabditis elegans]
 gi|33300482|emb|CAE17953.1| C. elegans protein Y80D3A.1, confirmed by transcript evidence
           [Caenorhabditis elegans]
 gi|33300622|emb|CAB60439.2| C. elegans protein Y80D3A.1, confirmed by transcript evidence
           [Caenorhabditis elegans]
          Length = 417

 Score = 54.4 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 58/304 (19%), Positives = 98/304 (32%), Gaps = 51/304 (16%)

Query: 15  RGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +    LD          Y G   ++ SLH GHL   +   WLQ+    P+ +
Sbjct: 83  RGMFFAHRDLTAILDRKEQGKPFYLYTGRGASSGSLHLGHLVPFIFTKWLQEVFDVPLVI 142

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                         D+ + + +  ++ E  +  +      I  G   T   + NN  ++C
Sbjct: 143 -----------QMTDDEKFLWKDMKVDEAKKMARENMKDIISVGFDPTKTFIFNNFDYMC 191

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY-----DFVELA 188
              Y ++++    +  VN   +          E  L    F    ++A       F ++ 
Sbjct: 192 PPFYENIVKI---WKVVNTNQARAIFG--FTPEDCLGKAAF--PAVEAAPCFASSFPQIF 244

Query: 189 KNYD---CRLQMGGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTASGTKMGKTLS 242
              +   C +     DQ        D+  RLK  K   +F+   P LT A  TKM  +  
Sbjct: 245 GKRNDIPCLIPC-AIDQDPFFRMTRDVAPRLKASKPSLIFSTFLPALTGAQ-TKMSASEP 302

Query: 243 GA-IWLN------KEMTSPYNFWQ----------YWRNIDDADVVSFAKRL--TTLPMSE 283
              I+L+      K   + Y F               N D      F +        ++E
Sbjct: 303 NTCIFLSDTAKQIKNKINKYAFSGGQQTVQEHREKGGNCDVDISYQFLRFFLDDDEKLAE 362

Query: 284 IDRM 287
           I   
Sbjct: 363 IREN 366


>gi|291301370|ref|YP_003512648.1| tryptophanyl-tRNA synthetase [Stackebrandtia nassauensis DSM 44728]
 gi|290570590|gb|ADD43555.1| tryptophanyl-tRNA synthetase [Stackebrandtia nassauensis DSM 44728]
          Length = 343

 Score = 54.4 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 45/249 (18%), Positives = 82/249 (32%), Gaps = 39/249 (15%)

Query: 19  HQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQ-LMLLFWLQKTGHKPISLMGGG 77
           +Q++ P E+      G      G   T   LH GH    L     LQ  G   + ++   
Sbjct: 7   NQLTVPDEIRS--RPGTARMLTGDRPTGK-LHIGHYFGSLRNRVRLQNQGVDSLVVIADY 63

Query: 78  TSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG----TGKTDALMLNNETWLC 133
                         +++  ++I  ++     I    + Y     + +   +  ++     
Sbjct: 64  --------------QVLTDRDIAADLSGH--IHEIVLDYLAAGISPQRSTIFTHSAVPAL 107

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDC 193
           +   +  L  + +          E + +   R  S+S L + Y   QA D +      D 
Sbjct: 108 NQLLLPFLSLVSTAELDRNPTVKEEIAA--ARRASVSGLIYTYPAHQAADILF----CDA 161

Query: 194 RLQMGGSDQWGNIICGIDLGERLKT--PKLFALTSPLL------TTASG-TKMGKTLSGA 244
            +   G DQ  ++     +  R      K+F +  PLL          G TKM K+   A
Sbjct: 162 TVVPVGDDQLPHLELTRTIARRFNDRYGKVFTVPKPLLSPAPRLLGVDGRTKMSKSRGNA 221

Query: 245 IWLNKEMTS 253
           I L+     
Sbjct: 222 IALSATADE 230


>gi|84999060|ref|XP_954251.1| tryptophanyl-trna synthetase [Theileria annulata]
 gi|65305249|emb|CAI73574.1| tryptophanyl-trna synthetase, putative [Theileria annulata]
          Length = 577

 Score = 54.4 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 53/314 (16%), Positives = 99/314 (31%), Gaps = 50/314 (15%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSF 86
           LD          Y G   ++ +LH GHL   +   WLQK+ + P+ +M     +  D  F
Sbjct: 253 LDNYEKGNKFFIYTGRGPSSEALHLGHLIPFIFTCWLQKSFNVPVVIM-----LSDDEKF 307

Query: 87  RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGS 146
               R  +  + ++             I  G       +  N  ++  +    L  ++  
Sbjct: 308 --VFREELELENVRNLA---LENAKDIIAVGFDPELTFIFRNTDYIQHLYKTTL--KLQK 360

Query: 147 FFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY-----DFVELAKNYD---CRLQMG 198
             + N++    S          +     +Y +L+        F  L  N +   C +  G
Sbjct: 361 KTTFNQL--RGSFGFDYSTNVGM----ISYPLLEGAASFSESFPNLFNNKEDIMCLVPQG 414

Query: 199 GSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTASGTKMGKT-LSGAIWLNKEMTSP 254
             DQ         L  +L   K   + +   P L   +  KM  +    AI++  +  + 
Sbjct: 415 -IDQDPFFRLTRSLAPKLGLKKPALIHSKFIPSLLGVN-QKMSSSIEGSAIFVTDDAETI 472

Query: 255 YNFWQYW------------RNID---DADV-VSFAKRL--TTLPMSEIDRMAKLQGKEIN 296
                 +              +    D DV   +   L  +   + EI +  K      N
Sbjct: 473 KRKIHKYAFSGGRDTAKEHMELGPNLDVDVSYQYLNFLVESDEELEEITQKYKSGQMLTN 532

Query: 297 EAKKIIATEITTMV 310
           E K  +   +  +V
Sbjct: 533 ELKNKLVDILVPIV 546


>gi|210634327|ref|ZP_03298063.1| hypothetical protein COLSTE_01985 [Collinsella stercoris DSM 13279]
 gi|210158854|gb|EEA89825.1| hypothetical protein COLSTE_01985 [Collinsella stercoris DSM 13279]
          Length = 402

 Score = 54.4 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 43/238 (18%), Positives = 75/238 (31%), Gaps = 33/238 (13%)

Query: 22  SNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSI 80
           SN    D+       T   G   T   LH GH    +     LQ+ G     L+      
Sbjct: 67  SNEIRADLPLHPEKYTMLTGDRPTGR-LHLGHYFGTLKSRVELQELGVHTNVLIADY--- 122

Query: 81  IGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDL 140
               + RD +  +     +   +                    +  ++    C+   +  
Sbjct: 123 -QVITDRDSTENIQ--DNVYNMVIDYLACG------LDPDKTMIYTHSAVPACNQLMLPF 173

Query: 141 LREIGSFFSVNRMLSFES-VRSRLK-REQSLSFLEFNYMILQAYDFVELAKNYDCRLQMG 198
           L  +        +L     V++ ++     L+ L   Y + QA D   L    +      
Sbjct: 174 LSLVSE-----ALLQRNPTVKAEMEASNHELTGLLLTYPVHQACD--ILFCKGNVV--PV 224

Query: 199 GSDQWGNIICGIDLGERLKT------PKLFALT--SPLLTTASGTKMGKTLSGAIWLN 248
           G DQ  +I     +  +         P++ AL   +PLL    G KM K+   AI ++
Sbjct: 225 GRDQLPHIELTRTIARKFNNRFGNVFPEVDALLSDTPLLPGLDGRKMSKSYGNAINIS 282


>gi|300782771|ref|YP_003763062.1| tryptophanyl-tRNA synthetase [Amycolatopsis mediterranei U32]
 gi|299792285|gb|ADJ42660.1| tryptophanyl-tRNA synthetase [Amycolatopsis mediterranei U32]
          Length = 343

 Score = 54.4 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 56/310 (18%), Positives = 94/310 (30%), Gaps = 47/310 (15%)

Query: 28  DILCSQGVVTAYIGYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSIIGDPSF 86
           +   ++       G   TA S H G+    L     LQ T H+    +    + I     
Sbjct: 4   EQTVAERRPRVLSGIQPTADSFHLGNYLGALRQWVRLQDT-HETFYSVVDLHA-ITVEQD 61

Query: 87  RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGS 146
               R+  R    Q     I    S+          A +    +W        +L     
Sbjct: 62  PKVLRQRTRVSAAQLLAIGIDPQRSALFVQSHVPEHAQL----SW--------VLECQTG 109

Query: 147 FFSVNRMLS-FESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGN 205
           F    RM    +    +     S+    F Y +LQA D + L +     +   G DQ  +
Sbjct: 110 FGEAGRMTQFKDKSAKQGSDRSSVGL--FTYPVLQAADIL-LYRADAVPV---GEDQRQH 163

Query: 206 IICGIDLGERLKT--PKLFALTSPLLTTASGT---------KMGKTLSGAIWLNKEMTSP 254
           +    DL +R      K F +  P +   +           KM K+ S    + + +  P
Sbjct: 164 LELTRDLAQRFNNRLGKTFVVPEPYIIKDTAKIYDLQEPTAKMSKSASNVNGIIELLEDP 223

Query: 255 YNFWQYWRN-IDD------------ADVVSFAKRLTTLPMSEIDRMAKL-QGKEINEAKK 300
               +  R+ + D            A V +     + L    I  +    +GK   + KK
Sbjct: 224 KRSAKKIRSAVTDTGREVKFDAENKAGVSNLLTIYSALTDRTIPDLEAAYEGKGYGDLKK 283

Query: 301 IIATEITTMV 310
            +       V
Sbjct: 284 DLGEVFVEWV 293


>gi|167629953|ref|YP_001680452.1| tryptophanyl-tRNA synthetase [Heliobacterium modesticaldum Ice1]
 gi|167592693|gb|ABZ84441.1| tryptophanyl-tRNA synthetase [Heliobacterium modesticaldum Ice1]
          Length = 333

 Score = 54.4 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 53/306 (17%), Positives = 96/306 (31%), Gaps = 53/306 (17%)

Query: 34  GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRM 93
                + G   T   LH GHL+ +     LQ   +  +  +    ++          +R 
Sbjct: 2   KKGKIFSGMRPTGQ-LHIGHLSVIENWIRLQDE-YDCVFGIVDWHALTTSFDDVQALQRR 59

Query: 94  MRSQEIQENIEKIKGIFSSFIKYGTGKTDAL------MLNNETWLCS-IKYIDLLREIGS 146
           +R   +      +    S  +     K  A       M+   +WL     Y D +++ G+
Sbjct: 60  IRDIALDWLSAGLDPEKSPIMVQSQVKEHAELHLLFSMMTPLSWLERVPTYKDQIQQFGA 119

Query: 147 FFSVNRMLSFESVRSRLKREQSLSFLEFN-YMILQAYDFVELAKNYDCRLQMGGSDQWGN 205
                               + +S   F  Y +LQA D + + K     +   G DQ  +
Sbjct: 120 Q------------------GKDISMYGFLGYPLLQAADIL-IYKATHVPV---GQDQIPH 157

Query: 206 IICGIDLGERLKT--------PKLFALT-SPLLTTASGTKMGKTLSGAIWLNKEM----- 251
           I    ++  R                L+  PLL      KM K+    I L+        
Sbjct: 158 IELSREVARRFNHLYQTEVFPEPQVLLSEVPLLPGIDNRKMSKSYGNDIALSASSEEIKE 217

Query: 252 ------TSPYNFWQYWRNIDDADVV-SFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
                 T P    +      D  VV ++ K      + +I    +  G      K+ +A 
Sbjct: 218 KVRLMVTDPARVRKTDLGNPDVCVVHTYHKIYNDGEVCDIGDQCRKAGIGCVACKQRLAA 277

Query: 305 EITTMV 310
           ++ T++
Sbjct: 278 KLETIL 283


>gi|153004981|ref|YP_001379306.1| tryptophanyl-tRNA synthetase [Anaeromyxobacter sp. Fw109-5]
 gi|152028554|gb|ABS26322.1| tryptophanyl-tRNA synthetase [Anaeromyxobacter sp. Fw109-5]
          Length = 332

 Score = 54.4 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 42/225 (18%), Positives = 73/225 (32%), Gaps = 41/225 (18%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTG-HKPISLMGGG---TSIIGDPSFRDESRRMMRS 96
           G   T   LH GHL   +   W++  G +            T+   DP+   ++ R M  
Sbjct: 11  GMRPTGR-LHLGHLHGALA-NWVRLQGENDCYFFSADWHALTTSYHDPAVIKQAEREMFV 68

Query: 97  QEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIG---SFFSVNRM 153
             I   ++       +       K  A +            + ++  +G      S   M
Sbjct: 69  DFIAAGVD---PQKVTLFVQSEVKEHAELY---------LLLGMITPLGWLERSPSYKEM 116

Query: 154 LSFESVRSRLKREQSLSFLEFN-YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL 212
              E++  R      L+   F  Y +L   D + + K     +   G DQ  ++    ++
Sbjct: 117 --RENITDR-----DLALYGFLGYPVLMTAD-IIMYKATRVPV---GVDQVPHLELSREI 165

Query: 213 GERLKT--PKLFALTSPLLT------TASGTKMGKTLSGAIWLNK 249
             +       +F    PLLT         G KM K+    I L +
Sbjct: 166 ARKFNHHYGPVFPEPQPLLTAAPKILGTDGRKMSKSYGNTIDLGE 210


>gi|161723123|ref|YP_438712.2| tryptophanyl-tRNA synthetase II [Burkholderia thailandensis E264]
 gi|167615223|ref|ZP_02383858.1| tryptophanyl-tRNA synthetase II [Burkholderia thailandensis Bt4]
 gi|257141787|ref|ZP_05590049.1| tryptophanyl-tRNA synthetase II [Burkholderia thailandensis E264]
          Length = 346

 Score = 54.4 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 45/293 (15%), Positives = 90/293 (30%), Gaps = 45/293 (15%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
            T + LH GH    +      +  H+   L+    ++  +    D+ RR      + E  
Sbjct: 20  PTGA-LHLGHYIGSLKTRIALQQTHRQFILVADTQALTDNAHDPDKVRR-----NVIEVA 73

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR- 162
                +          ++   + +    L  +     L  +            + + +R 
Sbjct: 74  LDYLAVG-----IDPRRSTIAVQSGLPALAELTLF-YLNFVTVARLERNPTIKDEIHARG 127

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT---- 218
             R+    FL   Y + QA D      +    + +G  DQ   I    ++  R+      
Sbjct: 128 FGRDIPAGFL--CYPVAQAADITAFKAD---TVPVG-DDQLPLIEQTNEIVRRINRQAGA 181

Query: 219 ---PKLFALTSPL--LTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYW------RNIDD 266
              P+  AL SP   L    G  KM K+   AI L+    +  +  +          + D
Sbjct: 182 DVLPEASALISPTGRLPGVDGKAKMSKSQGNAIALSSSPDAIADAVRRMYTDPNHLRVSD 241

Query: 267 ------ADVVSFAKRLTTLPMSEIDRMAKLQGKEI---NEAKKIIATEITTMV 310
                   V ++       P  E++R+              K+ +   +  ++
Sbjct: 242 PGTVEGNVVFTYLDAFDDEP-DEVERLKAAYRAGGLGDMALKRRLEDRLQALI 293


>gi|315040888|ref|XP_003169821.1| tyrosyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
 gi|311345783|gb|EFR04986.1| tyrosyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
          Length = 412

 Score = 54.4 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 37/229 (16%), Positives = 81/229 (35%), Gaps = 24/229 (10%)

Query: 18  IHQISNPRELDILC--SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMG 75
           + ++  P  L+ +       +  Y+G   T    H G+   ++ +    + G     L+ 
Sbjct: 18  LQEVLKPEILEDIIVKQNRPLKIYLGTATTGRP-HCGYFVPIVKIAHFLRAGCHVKILLA 76

Query: 76  GGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK--YGTGKTDALMLNNETWLC 133
                + +             + +    +  + + ++ +K  +   +    +L +   L 
Sbjct: 77  DIHGFLDNLKA--------PIELVNFRADYYRYVITAMLKAIHVPLEKLEFVLGSSYQLS 128

Query: 134 SIKYIDLLREIGSFFSV--NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +   +D+ R + S  +    +    E V+        LS L   Y ++QA D   L    
Sbjct: 129 AKYTMDIFR-LSSMVTEHDAKKAGAEVVKQ--VDNAPLSGL--IYPLMQALDEEHL---- 179

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           D   Q GG DQ        +   R+   +   L +P++   +G KM  +
Sbjct: 180 DVDAQFGGVDQRKIFTLAQETLPRIGYKERAHLMNPMVPGLAGGKMSAS 228


>gi|168007324|ref|XP_001756358.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162692397|gb|EDQ78754.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 397

 Score = 54.4 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 54/328 (16%), Positives = 94/328 (28%), Gaps = 52/328 (15%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSF 86
           LD          Y G   ++ SLH GHL   M   +LQ     P+ +             
Sbjct: 73  LDSYEKGEKFYLYTGRGPSSESLHLGHLVPFMFTKYLQDAFKVPLVIQLTDDEKFMWKDL 132

Query: 87  RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGS 146
           + +  R +  +  ++ I     +  +FI             N            +  I  
Sbjct: 133 KLDEARRLARENAKDIIACGFDVSRTFIFSDFEYVGGEFYRN------------MVRIAK 180

Query: 147 FFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA-----YDFVELAKNYD------CRL 195
             ++N++            E  +   +  +  +QA       F  L  + +      C +
Sbjct: 181 CVTLNQV--RGIFG--FVGEDHIG--KVMFPPIQAAPSFPTSFPHLFGDANQSKNIRCLI 234

Query: 196 QMGGSDQWGNIICGIDLGERLKTPKLFAL---TSPLLTTASGTKMGKTLSG-AIWLNKE- 250
                DQ        D   RL   K   +     P L   SG KM  +    AI+++   
Sbjct: 235 PC-AIDQDPYFRMTRDAAPRLGFHKPALIESSFFPALQGESG-KMSASDPNSAIYVSDNP 292

Query: 251 --------------MTSPYNFWQYWRNIDDADVVSFAKRL--TTLPMSEIDRMAKLQGKE 294
                           +     ++  NI+    V +          ++ I    +     
Sbjct: 293 KQIKDKINKSFSGGRDTAEEQRKFGANIEVDIAVKYLGFFLDDDKELARIKEEYRTGKLL 352

Query: 295 INEAKKIIATEITTMVHGREEAEKAATA 322
             E KKI+   +  MV     A  A T 
Sbjct: 353 TGEVKKILIDVLVAMVERHRRARAAVTE 380


>gi|258593579|emb|CBE69920.1| Tryptophanyl-tRNA synthetase (Tryptophan--tRNA ligase) (TrpRS)
           [NC10 bacterium 'Dutch sediment']
          Length = 328

 Score = 54.4 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 38/226 (16%), Positives = 70/226 (30%), Gaps = 35/226 (15%)

Query: 41  GYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           G   T   LH GHL   L     LQ+  ++    +    ++  + +     R  +    +
Sbjct: 9   GMRPTGR-LHLGHLFGALDNWRRLQEA-YECFFFVADWHALTTEYADTKSIRDNICEMAL 66

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
                 I    ++          A +                  + S  +    L     
Sbjct: 67  DMLAAGIDPSKATLFLQSRLHEHAELY----------------LLLSMITPVPWLERNPT 110

Query: 160 RSRLKRE---QSLSFLEFN-YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER 215
               ++E   + LS   F  Y +L A D + + K     +   G DQ  ++    ++  R
Sbjct: 111 YKEQQQELTTKDLSTHGFLGYPVLMASDIL-IYKANHVPV---GIDQVPHLELAREIARR 166

Query: 216 LKT--PKLFALTSPLLT------TASGTKMGKTLSGAIWLNKEMTS 253
                 ++     PLLT         G KM K+   A++L+     
Sbjct: 167 FNALYGEVLVEPQPLLTEFAKVPGTDGRKMSKSYGNAVFLSDSPEQ 212


>gi|66818755|ref|XP_643037.1| tyrosine-tRNA ligase [Dictyostelium discoideum AX4]
 gi|60471150|gb|EAL69118.1| tyrosine-tRNA ligase [Dictyostelium discoideum AX4]
          Length = 383

 Score = 54.4 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 45/247 (18%), Positives = 86/247 (34%), Gaps = 34/247 (13%)

Query: 11  ILSERG-----FIHQI-----SNPRELDILCSQGVVTAYIGYDLTASSLHA--GHLTQLM 58
            LSER       I Q+     S    + +L  +  +  Y G++ +   +H   G L  + 
Sbjct: 34  ELSERNKERLALIKQVGEEIVSEESLIKLLNGKEKLRCYDGFEPSGR-MHIAQGILKSIN 92

Query: 59  LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT 118
           +   + K G   I  +    +++ +        +M         + +           G 
Sbjct: 93  V-NRMTKAGCTFIFWVADWFAMLNN--------KMNGDLNKIRKVGQYMIEIWKAT--GM 141

Query: 119 GKTDALMLNNETWLCSIKYIDLLR--EIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNY 176
              +   L +   +        LR  +I   F+V R+     +  R   E  L   +  Y
Sbjct: 142 DMENVEFLWSSDEINKNPNDYWLRVMDIARKFNVPRIKKCSQIMGR-NEEDDLMCAQLLY 200

Query: 177 MILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLLTT-ASG 234
             +Q  D   L  +  C+L   G DQ    +  I+  +++K   K   ++  +L+    G
Sbjct: 201 PCMQCADIFYLKADI-CQL---GMDQRKVNMLAIEYCDKVKIKNKPIIVSHHMLSGLKEG 256

Query: 235 T-KMGKT 240
             KM K+
Sbjct: 257 QEKMSKS 263


>gi|297616728|ref|YP_003701887.1| tryptophanyl-tRNA synthetase [Syntrophothermus lipocalidus DSM
           12680]
 gi|297144565|gb|ADI01322.1| tryptophanyl-tRNA synthetase [Syntrophothermus lipocalidus DSM
           12680]
          Length = 327

 Score = 54.4 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 41/229 (17%), Positives = 74/229 (32%), Gaps = 39/229 (17%)

Query: 37  TAYIGYDLTASSLHAGHLTQLM---LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRM 93
           T   G   T   LH GHL+ L    +L    +     +      TS       ++  R M
Sbjct: 4   TVMSGMRPTGK-LHIGHLSVLRNWVMLQETYRCFFAIVDWHALTTSFDETEIIQENIRDM 62

Query: 94  -MRSQEIQENIEKIKGIFSSFIK-YGTGKTDALMLNNETWLCS-IKYIDLLREIGSFFSV 150
            +    +  +  K      S +K +        M+   +WL     Y + ++E+G     
Sbjct: 63  FLDWLSVGLDPAKSAVFVQSHVKEHAELHLLLSMVTPVSWLERCPTYKEQIQELGK---- 118

Query: 151 NRMLSFESVRSRLKREQSLSFLEFN-YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICG 209
                           + +S   F  Y +L A D +    +    + +G  DQ  ++   
Sbjct: 119 --------------EGKDISTYGFLGYPLLMAADILVYKAD---TVPVG-KDQLPHLELC 160

Query: 210 IDLGERLK--------TPKLFALTS-PLLTTASGTKMGKTLSGAIWLNK 249
            ++  R                L+  P++    G KM K+ +  I L  
Sbjct: 161 REIARRFNYLFNVSLFPEPQALLSKVPVIPGIDGRKMSKSYNNYISLTD 209


>gi|261377552|ref|ZP_05982125.1| tryptophan--tRNA ligase [Neisseria cinerea ATCC 14685]
 gi|269146292|gb|EEZ72710.1| tryptophan--tRNA ligase [Neisseria cinerea ATCC 14685]
          Length = 336

 Score = 54.4 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 42/219 (19%), Positives = 65/219 (29%), Gaps = 49/219 (22%)

Query: 174 FNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSP------ 227
           F+Y IL   D +    N +  +   G DQ  ++    D+  R         T P      
Sbjct: 136 FSYPILMTADILMFNAN-EVPV---GRDQIQHVEMARDIAGRFNHRFQELFTLPEVKIDE 191

Query: 228 ---LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWR---------NIDDAD-VVSFAK 274
              LL    G KM K+    I L +                         D   +    K
Sbjct: 192 NVELLVGLDGRKMSKSYGNTIPLWENDKKTQKSVNKIITNMKEPGEPKQPDESPLFEIYK 251

Query: 275 RLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQ 334
             +    +        +G    EAKK++A +I         AE A               
Sbjct: 252 AFSMPSETAAFTQMLAEGLAWGEAKKLLAAKIN--------AELAEPRER---------- 293

Query: 335 HMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLK 373
                    +E++     +  I++AG A +  EAR  L 
Sbjct: 294 --------YNELTSNPSQIEDILQAGAAKARKEARELLN 324


>gi|254486476|ref|ZP_05099681.1| ribosomal large subunit pseudouridine synthase B [Roseobacter sp.
           GAI101]
 gi|214043345|gb|EEB83983.1| ribosomal large subunit pseudouridine synthase B [Roseobacter sp.
           GAI101]
          Length = 336

 Score = 54.4 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 26/54 (48%), Gaps = 1/54 (1%)

Query: 342 SKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
            K +   G  +  ++ +AG A S  EA R +++  +++N   I +  L +   D
Sbjct: 10  PKTDTPPGDRIAKVLSRAGLA-SRREAERMIEAGRVRVNGVQIDSPALNVTAAD 62


>gi|15610472|ref|NP_217853.1| tryptophanyl-tRNA synthetase [Mycobacterium tuberculosis H37Rv]
 gi|15842933|ref|NP_337970.1| tryptophanyl-tRNA synthetase [Mycobacterium tuberculosis CDC1551]
 gi|31794521|ref|NP_857014.1| tryptophanyl-tRNA synthetase [Mycobacterium bovis AF2122/97]
 gi|121639265|ref|YP_979489.1| tryptophanyl-tRNA synthetase [Mycobacterium bovis BCG str. Pasteur
           1173P2]
 gi|148663200|ref|YP_001284723.1| tryptophanyl-tRNA synthetase [Mycobacterium tuberculosis H37Ra]
 gi|148824542|ref|YP_001289296.1| tryptophanyl-tRNA synthetase [Mycobacterium tuberculosis F11]
 gi|167967106|ref|ZP_02549383.1| tryptophanyl-tRNA synthetase [Mycobacterium tuberculosis H37Ra]
 gi|215405356|ref|ZP_03417537.1| tryptophanyl-tRNA synthetase [Mycobacterium tuberculosis 02_1987]
 gi|215413217|ref|ZP_03421918.1| tryptophanyl-tRNA synthetase [Mycobacterium tuberculosis 94_M4241A]
 gi|215428828|ref|ZP_03426747.1| tryptophanyl-tRNA synthetase [Mycobacterium tuberculosis T92]
 gi|215432305|ref|ZP_03430224.1| tryptophanyl-tRNA synthetase [Mycobacterium tuberculosis EAS054]
 gi|215447651|ref|ZP_03434403.1| tryptophanyl-tRNA synthetase [Mycobacterium tuberculosis T85]
 gi|218755123|ref|ZP_03533919.1| tryptophanyl-tRNA synthetase [Mycobacterium tuberculosis GM 1503]
 gi|219559403|ref|ZP_03538479.1| tryptophanyl-tRNA synthetase [Mycobacterium tuberculosis T17]
 gi|224991762|ref|YP_002646451.1| tryptophanyl-tRNA synthetase [Mycobacterium bovis BCG str. Tokyo
           172]
 gi|253800382|ref|YP_003033383.1| tryptophanyl-tRNA synthetase trpS [Mycobacterium tuberculosis KZN
           1435]
 gi|254233948|ref|ZP_04927273.1| tryptophanyl-tRNA synthetase trpS (tryptophan-tRNA ligase)
           [Mycobacterium tuberculosis C]
 gi|254365960|ref|ZP_04982005.1| tryptophanyl-tRNA synthetase trpS (tryptophan-tRNA ligase)
           [Mycobacterium tuberculosis str. Haarlem]
 gi|254552444|ref|ZP_05142891.1| tryptophanyl-tRNA synthetase [Mycobacterium tuberculosis '98-R604
           INH-RIF-EM']
 gi|260188389|ref|ZP_05765863.1| tryptophanyl-tRNA synthetase [Mycobacterium tuberculosis CPHL_A]
 gi|260202595|ref|ZP_05770086.1| tryptophanyl-tRNA synthetase [Mycobacterium tuberculosis T46]
 gi|260206698|ref|ZP_05774189.1| tryptophanyl-tRNA synthetase [Mycobacterium tuberculosis K85]
 gi|289445013|ref|ZP_06434757.1| tryptophanyl-tRNA synthetase [Mycobacterium tuberculosis T46]
 gi|289449029|ref|ZP_06438773.1| tryptophanyl-tRNA synthetase trpS [Mycobacterium tuberculosis
           CPHL_A]
 gi|289555616|ref|ZP_06444826.1| tryptophanyl-tRNA synthetase trpS [Mycobacterium tuberculosis KZN
           605]
 gi|289571568|ref|ZP_06451795.1| tryptophanyl-tRNA synthetase trpS [Mycobacterium tuberculosis T17]
 gi|289576064|ref|ZP_06456291.1| tryptophanyl-tRNA synthetase trpS [Mycobacterium tuberculosis K85]
 gi|289747157|ref|ZP_06506535.1| tryptophanyl-tRNA synthetase [Mycobacterium tuberculosis 02_1987]
 gi|289752037|ref|ZP_06511415.1| tryptophanyl-tRNA synthetase trpS [Mycobacterium tuberculosis T92]
 gi|289755462|ref|ZP_06514840.1| tryptophanyl-tRNA synthetase trpS [Mycobacterium tuberculosis
           EAS054]
 gi|289759486|ref|ZP_06518864.1| tryptophanyl-tRNA synthetase trpS [Mycobacterium tuberculosis T85]
 gi|289763528|ref|ZP_06522906.1| tryptophanyl-tRNA synthetase trpS (tryptophan-tRNA ligase)
           [Mycobacterium tuberculosis GM 1503]
 gi|294995895|ref|ZP_06801586.1| tryptophanyl-tRNA synthetase [Mycobacterium tuberculosis 210]
 gi|297635994|ref|ZP_06953774.1| tryptophanyl-tRNA synthetase [Mycobacterium tuberculosis KZN 4207]
 gi|297732991|ref|ZP_06962109.1| tryptophanyl-tRNA synthetase [Mycobacterium tuberculosis KZN R506]
 gi|298526814|ref|ZP_07014223.1| tryptophanyl-tRNA synthetase [Mycobacterium tuberculosis 94_M4241A]
 gi|306777668|ref|ZP_07416005.1| tryptophanyl-tRNA synthetase trpS [Mycobacterium tuberculosis
           SUMu001]
 gi|306782394|ref|ZP_07420731.1| tryptophanyl-tRNA synthetase trpS [Mycobacterium tuberculosis
           SUMu002]
 gi|306786216|ref|ZP_07424538.1| tryptophanyl-tRNA synthetase trpS [Mycobacterium tuberculosis
           SUMu003]
 gi|306790584|ref|ZP_07428906.1| tryptophanyl-tRNA synthetase trpS [Mycobacterium tuberculosis
           SUMu004]
 gi|306795108|ref|ZP_07433410.1| tryptophanyl-tRNA synthetase trpS [Mycobacterium tuberculosis
           SUMu005]
 gi|306799303|ref|ZP_07437605.1| tryptophanyl-tRNA synthetase trpS [Mycobacterium tuberculosis
           SUMu006]
 gi|306805150|ref|ZP_07441818.1| tryptophanyl-tRNA synthetase trpS [Mycobacterium tuberculosis
           SUMu008]
 gi|306809338|ref|ZP_07446006.1| tryptophanyl-tRNA synthetase trpS [Mycobacterium tuberculosis
           SUMu007]
 gi|306969442|ref|ZP_07482103.1| tryptophanyl-tRNA synthetase trpS [Mycobacterium tuberculosis
           SUMu009]
 gi|306973788|ref|ZP_07486449.1| tryptophanyl-tRNA synthetase trpS [Mycobacterium tuberculosis
           SUMu010]
 gi|307081498|ref|ZP_07490668.1| tryptophanyl-tRNA synthetase trpS [Mycobacterium tuberculosis
           SUMu011]
 gi|307086105|ref|ZP_07495218.1| tryptophanyl-tRNA synthetase trpS [Mycobacterium tuberculosis
           SUMu012]
 gi|313660323|ref|ZP_07817203.1| tryptophanyl-tRNA synthetase [Mycobacterium tuberculosis KZN V2475]
 gi|54039696|sp|P67591|SYW_MYCBO RecName: Full=Tryptophanyl-tRNA synthetase; AltName:
           Full=Tryptophan--tRNA ligase; Short=TrpRS
 gi|54042053|sp|P67590|SYW_MYCTU RecName: Full=Tryptophanyl-tRNA synthetase; AltName:
           Full=Tryptophan--tRNA ligase; Short=TrpRS
 gi|2894246|emb|CAA17108.1| PROBABLE TRYPTOPHANYL-TRNA SYNTHETASE TRPS (TRYPTOPHAN--TRNA
           LIGASE) (TRPRS) (TRYPTOPHAN TRANSLASE) [Mycobacterium
           tuberculosis H37Rv]
 gi|13883268|gb|AAK47784.1| tryptophanyl-tRNA synthetase [Mycobacterium tuberculosis CDC1551]
 gi|31620117|emb|CAD95489.1| PROBABLE TRYPTOPHANYL-TRNA SYNTHETASE TRPS (TRYPTOPHAN--TRNA
           LIGASE) (TRPRS) (TRYPTOPHAN TRANSLASE) [Mycobacterium
           bovis AF2122/97]
 gi|121494913|emb|CAL73396.1| Probable tryptophanyl-tRNA synthetase trpS [Mycobacterium bovis BCG
           str. Pasteur 1173P2]
 gi|124599477|gb|EAY58581.1| tryptophanyl-tRNA synthetase trpS (tryptophan-tRNA ligase)
           [Mycobacterium tuberculosis C]
 gi|134151473|gb|EBA43518.1| tryptophanyl-tRNA synthetase trpS (tryptophan-tRNA ligase)
           [Mycobacterium tuberculosis str. Haarlem]
 gi|148507352|gb|ABQ75161.1| tryptophanyl-tRNA synthetase [Mycobacterium tuberculosis H37Ra]
 gi|148723069|gb|ABR07694.1| tryptophanyl-tRNA synthetase trpS (tryptophan-tRNA ligase)
           [Mycobacterium tuberculosis F11]
 gi|224774877|dbj|BAH27683.1| tryptophanyl-tRNA synthetase [Mycobacterium bovis BCG str. Tokyo
           172]
 gi|253321885|gb|ACT26488.1| tryptophanyl-tRNA synthetase trpS [Mycobacterium tuberculosis KZN
           1435]
 gi|289417932|gb|EFD15172.1| tryptophanyl-tRNA synthetase [Mycobacterium tuberculosis T46]
 gi|289421987|gb|EFD19188.1| tryptophanyl-tRNA synthetase trpS [Mycobacterium tuberculosis
           CPHL_A]
 gi|289440248|gb|EFD22741.1| tryptophanyl-tRNA synthetase trpS [Mycobacterium tuberculosis KZN
           605]
 gi|289540495|gb|EFD45073.1| tryptophanyl-tRNA synthetase trpS [Mycobacterium tuberculosis K85]
 gi|289545322|gb|EFD48970.1| tryptophanyl-tRNA synthetase trpS [Mycobacterium tuberculosis T17]
 gi|289687685|gb|EFD55173.1| tryptophanyl-tRNA synthetase [Mycobacterium tuberculosis 02_1987]
 gi|289692624|gb|EFD60053.1| tryptophanyl-tRNA synthetase trpS [Mycobacterium tuberculosis T92]
 gi|289696049|gb|EFD63478.1| tryptophanyl-tRNA synthetase trpS [Mycobacterium tuberculosis
           EAS054]
 gi|289711034|gb|EFD75050.1| tryptophanyl-tRNA synthetase trpS (tryptophan-tRNA ligase)
           [Mycobacterium tuberculosis GM 1503]
 gi|289715050|gb|EFD79062.1| tryptophanyl-tRNA synthetase trpS [Mycobacterium tuberculosis T85]
 gi|298496608|gb|EFI31902.1| tryptophanyl-tRNA synthetase [Mycobacterium tuberculosis 94_M4241A]
 gi|308214004|gb|EFO73403.1| tryptophanyl-tRNA synthetase trpS [Mycobacterium tuberculosis
           SUMu001]
 gi|308324943|gb|EFP13794.1| tryptophanyl-tRNA synthetase trpS [Mycobacterium tuberculosis
           SUMu002]
 gi|308329175|gb|EFP18026.1| tryptophanyl-tRNA synthetase trpS [Mycobacterium tuberculosis
           SUMu003]
 gi|308333008|gb|EFP21859.1| tryptophanyl-tRNA synthetase trpS [Mycobacterium tuberculosis
           SUMu004]
 gi|308336630|gb|EFP25481.1| tryptophanyl-tRNA synthetase trpS [Mycobacterium tuberculosis
           SUMu005]
 gi|308340495|gb|EFP29346.1| tryptophanyl-tRNA synthetase trpS [Mycobacterium tuberculosis
           SUMu006]
 gi|308344366|gb|EFP33217.1| tryptophanyl-tRNA synthetase trpS [Mycobacterium tuberculosis
           SUMu007]
 gi|308348304|gb|EFP37155.1| tryptophanyl-tRNA synthetase trpS [Mycobacterium tuberculosis
           SUMu008]
 gi|308353028|gb|EFP41879.1| tryptophanyl-tRNA synthetase trpS [Mycobacterium tuberculosis
           SUMu009]
 gi|308356865|gb|EFP45716.1| tryptophanyl-tRNA synthetase trpS [Mycobacterium tuberculosis
           SUMu010]
 gi|308360821|gb|EFP49672.1| tryptophanyl-tRNA synthetase trpS [Mycobacterium tuberculosis
           SUMu011]
 gi|308364427|gb|EFP53278.1| tryptophanyl-tRNA synthetase trpS [Mycobacterium tuberculosis
           SUMu012]
 gi|323718009|gb|EGB27192.1| tryptophanyl-tRNA synthetase trpS [Mycobacterium tuberculosis
           CDC1551A]
 gi|326905178|gb|EGE52111.1| tryptophanyl-tRNA synthetase trpS [Mycobacterium tuberculosis
           W-148]
 gi|328460115|gb|AEB05538.1| tryptophanyl-tRNA synthetase trpS [Mycobacterium tuberculosis KZN
           4207]
          Length = 336

 Score = 54.4 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 46/247 (18%), Positives = 82/247 (33%), Gaps = 30/247 (12%)

Query: 34  GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRM 93
           G    + G   T+ SLH G+    +  +   +  H     +    + I  P   +  RR 
Sbjct: 6   GSRRIFSGVQPTSDSLHLGNALGAVAQWVGLQDDHDAFFCVVDLHA-ITIPQDPEALRR- 63

Query: 94  MRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRM 153
                      +     + ++  G     A +          +   +L     F   +RM
Sbjct: 64  -----------RTLITAAQYLALGIDPGRATIFVQSQVPAHTQLAWVLGCFTGFGQASRM 112

Query: 154 LSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLG 213
             F+   +R   E +   L F Y +LQA D +     YD  L   G DQ  ++    D+ 
Sbjct: 113 TQFKDKSARQGSEATTVGL-FTYPVLQAADVLA----YDTELVPVGEDQRQHLELARDVA 167

Query: 214 ERLKTPKLFALTSP--LLTTASGT---------KMGKTLSGAIWLNKEMTSPYNFWQYWR 262
           +R  +     L  P  L+   +           KM K+      L   +  P    +  R
Sbjct: 168 QRFNSRFPGTLVVPDVLIPKMTAKIYDLQDPTSKMSKSAGTDAGLINLLDDPALSAKKIR 227

Query: 263 N-IDDAD 268
           + + D++
Sbjct: 228 SAVTDSE 234


>gi|194748078|ref|XP_001956476.1| GF24575 [Drosophila ananassae]
 gi|190623758|gb|EDV39282.1| GF24575 [Drosophila ananassae]
          Length = 702

 Score = 54.1 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 40/259 (15%), Positives = 75/259 (28%), Gaps = 38/259 (14%)

Query: 20  QISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGT 78
           + S+        S+     + G   T  SLH G+    +     +Q         +    
Sbjct: 75  KSSHNEGFPEGKSRWPRKVFSGVQPTG-SLHLGNYLGAVRKWVEMQNAREDVTICIVDL- 132

Query: 79  SIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYI 138
                 S        +  + I      +             K+   + ++        +I
Sbjct: 133 -----HSITLPHNPPVLRENIFTMAATLLSCG-----IDPAKSTLFVQSSVPEHAEFNWI 182

Query: 139 DLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMG 198
             L  + +   + ++  F   +SRL ++  L    + Y +LQA D + L K     +   
Sbjct: 183 --LSSLTTMPRLAQLPQFRE-KSRLVKDVPLGL--YVYPVLQAAD-IMLYKATQVPV--- 233

Query: 199 GSDQWGNIICGIDLGERLKTPKLFALTSPL--LTTASG------------TKMGKTLSGA 244
           G+DQ  +I     L     T   +  T P+       G             KM K+ +  
Sbjct: 234 GADQLQHIQLAQHLARSYNTR--YGETFPVCQALIEDGNASRVLSLRDPSKKMSKSEANP 291

Query: 245 IWLNKEMTSPYNFWQYWRN 263
                    P    Q  + 
Sbjct: 292 KATINLCDPPDVIVQKIKK 310


>gi|146295971|ref|YP_001179742.1| tryptophanyl-tRNA synthetase [Caldicellulosiruptor saccharolyticus
           DSM 8903]
 gi|145409547|gb|ABP66551.1| tryptophanyl-tRNA synthetase [Caldicellulosiruptor saccharolyticus
           DSM 8903]
          Length = 325

 Score = 54.1 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 32/175 (18%), Positives = 63/175 (36%), Gaps = 31/175 (17%)

Query: 160 RSRLKREQSLSFLEFN-YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK- 217
           + R  +E++++   F  Y  LQA D +     Y   L   G DQ  ++    ++  R   
Sbjct: 112 QMRELKEKNIATYGFLGYPCLQAADILI----YKAELVPVGEDQLPHLELTREIARRFNY 167

Query: 218 -------TPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRN-IDDA-- 267
                   P+    T  +L    G KM K+    I L++++    +  +   N + D   
Sbjct: 168 LYGQIFPEPQPILNTVKVLIGTDGRKMSKSYGNTIALSEDL---ESVRKKVMNMVTDPAR 224

Query: 268 ------------DVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMV 310
                        V ++ K  +   + EI+   +       E KK +   ++  +
Sbjct: 225 IRKNDPGHPEVCTVFAYHKIFSEDTVDEIEINCREGKIGCVECKKKLFDNLSKFL 279


>gi|303389381|ref|XP_003072923.1| tyrosyl-tRNA synthetase [Encephalitozoon intestinalis ATCC 50506]
 gi|303302066|gb|ADM11563.1| tyrosyl-tRNA synthetase [Encephalitozoon intestinalis ATCC 50506]
          Length = 337

 Score = 54.1 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 42/232 (18%), Positives = 75/232 (32%), Gaps = 21/232 (9%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R    ++    EL  + S+  +  Y G  +T    H  +L  LM +      G    
Sbjct: 9   LITRNL-QEVLGLEELKKIVSERNLNVYWGTAITGRP-HIAYLVPLMKVKDFLDAGCNVK 66

Query: 72  SLMGGGTSII---GDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
            L+      +     P  + + R +   + I+  ++ +       I++  G         
Sbjct: 67  VLLADIHGFLDNLKAPIEKVQDRCIYYEKLIKSCLKMLGVDLGR-IQFIKGSEFQK---- 121

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
                +   +DL + +      +   +   V  ++K           Y  +QA D V L+
Sbjct: 122 ----SNEYTMDLYKILSITSEHDAKKAGAQVVKQVKNP---MVSSLIYPAMQALDEVHLS 174

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
                  Q GG DQ             L   K   L SP+L   +  KM  +
Sbjct: 175 ----VDAQFGGVDQRKIFTYARKYLPLLNYEKRIHLMSPMLPGLNSEKMSSS 222


>gi|302908936|ref|XP_003049962.1| hypothetical protein NECHADRAFT_71656 [Nectria haematococca mpVI
           77-13-4]
 gi|256730899|gb|EEU44249.1| hypothetical protein NECHADRAFT_71656 [Nectria haematococca mpVI
           77-13-4]
          Length = 394

 Score = 54.1 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 47/242 (19%), Positives = 84/242 (34%), Gaps = 26/242 (10%)

Query: 12  LSER-GFI----HQISNPRELDILCSQGV-VTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           + ER G I     ++ NP  ++ + ++G     Y G   T    H G+L   M +     
Sbjct: 6   IEERLGLIRENLAEVLNPEIIESIMAEGRHPKIYWGTATTGRP-HCGYLVPAMKIAQFLA 64

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA-- 123
            G     L+      +      D  +  +  + + +     + + +S +K      D   
Sbjct: 65  AGCDVTILLADVHGFL------DNLKAPL--ELVAQRANYYRFVITSMLKAVGVPIDKLR 116

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSV-NRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
            +L +     S   +D+ +          +    E V+        LS L   Y ILQ  
Sbjct: 117 FVLGSSYQTSSDYTMDVYKLTALVSEHDAKKAGAEVVKQ--TSNAPLSGL--IYPILQVL 172

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           D   L    DC  Q GG DQ        +   +L   +   L +P++   +G KM  +  
Sbjct: 173 DEQYL----DCDAQFGGVDQRKLFTAAKEWLPKLGYRQRAHLLNPMVAGLNGNKMSSSDE 228

Query: 243 GA 244
            +
Sbjct: 229 NS 230


>gi|156547838|ref|XP_001602505.1| PREDICTED: similar to GA18259-PA [Nasonia vitripennis]
          Length = 524

 Score = 54.1 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 51/279 (18%), Positives = 85/279 (30%), Gaps = 25/279 (8%)

Query: 24  PRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSII-- 81
             +L  +  Q  +  Y G   T    H G+ T +  +    + G +   L     + +  
Sbjct: 23  DEKLKTILKQRDLKVYWGTATTGKP-HIGYFTPMSKIADFLRAGVEVTILFADLHAYLDN 81

Query: 82  -GDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDL 140
              P    E R       I+  +  I       +K+  G            L     +D+
Sbjct: 82  MKAPWELLELRTQYYEAVIKAMLRSIDVPLEK-LKFIKGSDYQ--------LSKEYTLDM 132

Query: 141 LREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGS 200
            R        +   +   V  ++            Y  LQA D   L        Q GG 
Sbjct: 133 YRLSSVVTEHDAKKAGAEVVKQVANPL---LSGLLYPGLQALDEEYLK----VDAQFGGV 185

Query: 201 DQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA-IWLNKEMTSPYNFWQ 259
           DQ             L   K   L +P++   +G KM  +   + I L     S     +
Sbjct: 186 DQRKIFTFAEKYLPALGYEKRIHLMNPMIPGLAGAKMSSSEEDSKIDLLDNAASVKKKLK 245

Query: 260 YWR----NIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE 294
                  NI D  ++SF+K +    M E ++    +  E
Sbjct: 246 KAFCEPGNITDNGLLSFSKSVLFPLMKEGEKYLVPRAAE 284


>gi|116748129|ref|YP_844816.1| tryptophanyl-tRNA synthetase [Syntrophobacter fumaroxidans MPOB]
 gi|116697193|gb|ABK16381.1| tryptophanyl-tRNA synthetase [Syntrophobacter fumaroxidans MPOB]
          Length = 330

 Score = 54.1 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 41/241 (17%), Positives = 82/241 (34%), Gaps = 46/241 (19%)

Query: 41  GYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           G   T   LH G+L   L     LQ+  ++    +    ++  + +   + R     + +
Sbjct: 10  GMRPTGR-LHLGNLHGALDNWIQLQQQ-YECFFFVADWHALTTEYATPGQIRE-NTWEMV 66

Query: 100 QEN-IEKIKGIFSSFIKYGTGKTDAL------MLNNETWLCS-IKYIDLLREIGSFFSVN 151
            +     +    S+       K  A       M+    WL     Y + L+++       
Sbjct: 67  IDWLAAGLDPAQSTLFIQSDIKEHAELHLLLSMITPLPWLERTPTYKEQLQQL------- 119

Query: 152 RMLSFESVRSRLKREQSLSFLEFN-YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGI 210
                         ++ LS   F  Y +LQA D + + + +   +   G DQ  ++    
Sbjct: 120 -------------DQKDLSTYGFLGYPVLQAAD-IVIYRAHGVPV---GKDQLPHVELTR 162

Query: 211 DLGERLK---TPKLF-----ALT-SPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYW 261
           ++  R       ++F      LT  P+L    G KM K+    I++++   S  +     
Sbjct: 163 EIARRFNFMYEREVFPIPDALLTEVPVLPGLDGRKMSKSYGNCIFISEPEESVKDKISKM 222

Query: 262 R 262
            
Sbjct: 223 M 223


>gi|255721245|ref|XP_002545557.1| tyrosyl-tRNA synthetase [Candida tropicalis MYA-3404]
 gi|240136046|gb|EER35599.1| tyrosyl-tRNA synthetase [Candida tropicalis MYA-3404]
          Length = 386

 Score = 54.1 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 34/236 (14%), Positives = 77/236 (32%), Gaps = 29/236 (12%)

Query: 18  IHQISNPRELDILCSQG--VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMG 75
           + +  N + +  +  +    V  Y G   T    H G+   ++ L    K G +   L+ 
Sbjct: 18  LQETLNGQIIKDVLEKENRPVKIYWGTAPTGKP-HCGYFVPMIKLAHFLKAGCEVTVLLA 76

Query: 76  GGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSI 135
              + +      D  +  +  + +    +  + +  + ++  +       L         
Sbjct: 77  DLHAFL------DNMKAPL--EVVNYRAKYYEFVVKAILR--SINVPIERLKFVVGSSYQ 126

Query: 136 KYIDLLREIGSFFSVNRMLSFESVRSRLKRE------QSLSFLEFNYMILQAYDFVELAK 189
           +  D + ++   F ++ ++S      R   +        L      Y ++QA D   L  
Sbjct: 127 QGGDYIMDL---FKLSNIVSQND-AKRAGADVVKQVANPL-LSGLIYPLMQAIDEEHL-- 179

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTAS-GTKMGKTLSGA 244
                 Q GG DQ    +   +    +   K   L +P++     G KM  +   +
Sbjct: 180 --GVDAQFGGVDQRKIFVLAEENLPSIGYKKRAHLMNPMVPGLGQGGKMSASDPNS 233


>gi|167840515|ref|ZP_02467199.1| tryptophanyl-tRNA synthetase II [Burkholderia thailandensis MSMB43]
          Length = 346

 Score = 54.1 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 44/293 (15%), Positives = 91/293 (31%), Gaps = 45/293 (15%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
            T + LH GH    +      +  H+   L+    ++  +    D+ RR      + E  
Sbjct: 20  PTGA-LHLGHYIGSLKTRIALQDTHRQFILVADTQALTDNAHDPDKVRR-----NVIEVA 73

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR- 162
                +          ++   + +    L  +     L  +            + + +R 
Sbjct: 74  LDYLAVG-----IDPRRSTIAVQSGLPALAELTLF-YLNFVTVARLERNPTIKDEIHARG 127

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT---- 218
             R+    FL   Y + QA D      +    + +G  DQ   +    ++  R+      
Sbjct: 128 FGRDIPAGFL--CYPVAQAADITAFKAD---TVPVG-DDQLPLVEQTNEIVRRINRQAGV 181

Query: 219 ---PKLFALTSPL--LTTASGT-KMGKTLSGAIWLNKEMTSPYN----FWQ--YWRNIDD 266
              P+  AL SP   L    G  KM K+   AI L+   ++  +     +       + D
Sbjct: 182 DVLPEASALISPTGRLPGVDGRAKMSKSQGNAIALSSPPSAIADAVKRMYTDPKHLRVSD 241

Query: 267 ------ADVVSFAKRLTTLPMSEIDRMAKLQGKEI---NEAKKIIATEITTMV 310
                   V ++       P  E++R+              K+ +   +  ++
Sbjct: 242 PGTVEGNVVFTYLDAFDDEP-DEVERLKAAYRAGGLGDMALKRRLEDRLQALI 293


>gi|296813605|ref|XP_002847140.1| tyrosyl-tRNA synthetase [Arthroderma otae CBS 113480]
 gi|238842396|gb|EEQ32058.1| tyrosyl-tRNA synthetase [Arthroderma otae CBS 113480]
          Length = 412

 Score = 54.1 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 36/213 (16%), Positives = 73/213 (34%), Gaps = 22/213 (10%)

Query: 32  SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESR 91
               +  Y+G   T    H G+   ++ +    + G     L+      + +        
Sbjct: 34  QNRPLKIYLGTATTGRP-HCGYFVPIVKIAHFLRAGCHVKILLADIHGFLDNLKA----- 87

Query: 92  RMMRSQEIQENIEKIKGIFSSFIK--YGTGKTDALMLNNETWLCSIKYIDLLREIGSFFS 149
                  +    E  + + ++ +K  +   +    +L +   L +   +D+ R + S  +
Sbjct: 88  ---PIDLVNFRAEYYRYVITAMLKAIHVPIEKLEFVLGSSYQLSAKYTMDIFR-LSSMVT 143

Query: 150 V--NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNII 207
               +    E V+        LS L   Y ++QA D   L    D   Q GG DQ     
Sbjct: 144 EHDAKKAGAEVVKQ--VDNAPLSGL--IYPLMQALDEEHL----DVDAQFGGVDQRKIFT 195

Query: 208 CGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
              +   R+   +   L +P++   +G KM  +
Sbjct: 196 LAQETLPRIGYKERAHLMNPMVPGLAGGKMSAS 228


>gi|147677573|ref|YP_001211788.1| tryptophanyl-tRNA synthetase [Pelotomaculum thermopropionicum SI]
 gi|146273670|dbj|BAF59419.1| tryptophanyl-tRNA synthetase [Pelotomaculum thermopropionicum SI]
          Length = 324

 Score = 54.1 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 36/233 (15%), Positives = 72/233 (30%), Gaps = 33/233 (14%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   +  SLH G+   +M      +  ++    +    ++    S  D    ++R Q  +
Sbjct: 6   GIQPSG-SLHLGNYFGMMKRMVEYQENNELFCFLVNYHALT---SVFDAE--LLRRQTFE 59

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
              + +             ++D   +   TWL           + +   +  +    S +
Sbjct: 60  AACDFLALGLDPEKSVFWVQSDVQEVTELTWL-----------LSNVTGMGLLERSHSYK 108

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT-- 218
            +  +    S   F Y +L A D + L       +   G DQ  ++    D+  R     
Sbjct: 109 DKTAKGIPASHGLFAYPVLMAADIL-LYGAEKVPV---GKDQKQHLEIARDIAIRFNNTY 164

Query: 219 PKLFALTSP-------LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNI 264
            + F +  P        +    G KM K+   AI   +         +    I
Sbjct: 165 GETFVVPEPDIEESVATVPGIDGQKMSKSYGNAI---EIFAGEKEMREKVMKI 214


>gi|308162177|gb|EFO64586.1| Tyrosyl-tRNA synthetase [Giardia lamblia P15]
          Length = 387

 Score = 54.1 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 48/302 (15%), Positives = 101/302 (33%), Gaps = 39/302 (12%)

Query: 5   KSDFLSILSERGFIHQISNPRELDILC---SQGVVTAYIGYDLTASSLHA--GHLTQLML 59
           K   L  L++      I  P EL  L        +T Y G++ +   +H   G    + +
Sbjct: 15  KQHLLEKLAD-----DIMCPEELHALLHADESKRLTCYDGFEPSGR-IHIAQGIAKAINV 68

Query: 60  LFWLQKTGHKPISLMGGGTSIIGDP-SFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT 118
              L ++G   +  +    + + +         + +    ++          S  + + T
Sbjct: 69  -NRLLRSGIDCVFYVADWFAALNNKCDAELSKIQTLGRYFVEVWKACGMLGVSKPVVFST 127

Query: 119 GKT-DALMLNNETWLCSIKYIDLLR--EIGSFFSVNRMLSFESVRSRLK-REQSLSFLEF 174
           G+T     +    ++        +R   I   F+V RM    ++  R +  +Q +S  + 
Sbjct: 128 GQTASVRFVWASEFIRQNSSSYWMRVMNIARSFTVPRMQRCSTIMGRTEGDDQPIS--QI 185

Query: 175 NYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLG----ERLKTPKLFALTSPLLT 230
            Y  +Q  D  EL  +    ++MG  DQ        D      E      +  +   LL 
Sbjct: 186 LYPSMQCADIFELKLDM---VEMG-LDQRKVNALARDYCDKSAELKYHKPVILMHHMLLG 241

Query: 231 TASGTKMGKTLSG-AIWLNKEMTSPYNFWQYWRNIDDAD--------VVSFAKRLTTLPM 281
                KM K++   AI+++          +   N    +        ++ + K +    +
Sbjct: 242 LVGDGKMSKSVPDSAIYMDDSF---EEIQRKIMNASCPEPGAEDGNPILEYYKYIVFGAI 298

Query: 282 SE 283
            +
Sbjct: 299 EQ 300


>gi|167577056|ref|ZP_02369930.1| tryptophanyl-tRNA synthetase II [Burkholderia thailandensis TXDOH]
          Length = 346

 Score = 54.1 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 44/292 (15%), Positives = 89/292 (30%), Gaps = 43/292 (14%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
            T + LH GH    +      +  H+   L+    ++  +    D+ RR      + E  
Sbjct: 20  PTGA-LHLGHYIGSLKTRIALQQTHRQFILVADTQALTDNAHDPDKVRR-----NVIEVA 73

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR- 162
                +          ++   + +    L  +     L  +            + + +R 
Sbjct: 74  LDYLAVG-----IDPRRSTIAVQSGLPALAELTLF-YLNFVTVARLERNPTIKDEIHARG 127

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT---- 218
             R+    FL   Y + QA D      +    + +G  DQ   I    ++  R+      
Sbjct: 128 FGRDIPAGFL--CYPVAQAADITAFKAD---TVPVG-DDQLPLIEQTNEIVRRINRQAGA 181

Query: 219 ---PKLFALTSPL--LTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYW------RNIDD 266
              P+  AL SP   L    G  KM K+   AI L+    +  +  +          + D
Sbjct: 182 DVLPEASALISPTGRLPGVDGKAKMSKSQGNAIALSSSPDAIADAVRRMYTDPNHLRVSD 241

Query: 267 ------ADVVSFAKRLTTLPMSEIDRMAKLQGKEINE--AKKIIATEITTMV 310
                   V ++       P       A  +   + +   K+ +   +  ++
Sbjct: 242 PGTVEGNVVFTYLDAFDDEPDEVERLKAAYRAGGLGDMTLKRRLEDRLQALI 293


>gi|328950569|ref|YP_004367904.1| tryptophanyl-tRNA synthetase [Marinithermus hydrothermalis DSM
           14884]
 gi|328450893|gb|AEB11794.1| tryptophanyl-tRNA synthetase [Marinithermus hydrothermalis DSM
           14884]
          Length = 334

 Score = 54.1 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 37/188 (19%), Positives = 64/188 (34%), Gaps = 33/188 (17%)

Query: 149 SVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIIC 208
            V  +      + +  R+ S+      Y +LQA D + + K     +   G DQ  +I  
Sbjct: 104 PVGDLTRMTQYKDKAARQVSVGAGLLMYPVLQAADIL-IYKADTVPV---GEDQLQHIEL 159

Query: 209 GIDLGERLKT------PKLFALTSP---LLTTASGT-KMGKTLSGAIWLNKEMTSPYNFW 258
             ++  R         P+  A   P    +    G  KM K++   I L ++   P   W
Sbjct: 160 TREIARRFNGRFKEIFPEPQAFVDPNAPRIPGIDGKAKMSKSVGNTIGLLED---PKQIW 216

Query: 259 QYWRNIDDADV---------VSFAKRLTTLPMSEIDRMAKLQGKEINEA-------KKII 302
           +  R I D               +   T L       M +   +E  +A       K+I+
Sbjct: 217 EKIRTIPDDPARIRLSDPGEPERSTVFTFLKYVAPPGMVQALAEEYRQAGVGTLVIKRIL 276

Query: 303 ATEITTMV 310
             EI  ++
Sbjct: 277 FQEIMKIL 284


>gi|307181468|gb|EFN69060.1| Tyrosyl-tRNA synthetase, cytoplasmic [Camponotus floridanus]
          Length = 522

 Score = 54.1 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 38/233 (16%), Positives = 68/233 (29%), Gaps = 21/233 (9%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R     + + + L  +  +  +  Y G   T    H G+   +  +    + G +  
Sbjct: 11  LITRNLAEWLGDEK-LKSILKERDLKLYWGTATTGRP-HIGYFAPMCKIADFLRAGVEVT 68

Query: 72  SLMGGGTSII---GDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
            L     + +     P    E R       I+  ++ I       +K+  G         
Sbjct: 69  VLFADLHAYLDNMKAPWELLELRTQYYEAVIKAMLKSIDVPLDK-LKFVKGTDYQ----- 122

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
              L     +D+ R        +   +   V  ++            Y  LQA D   L 
Sbjct: 123 ---LSKEYTLDVYRLSSLVTEHDAKKAGAEVVKQVSNPL---LSGLLYPGLQALDEHHLK 176

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
                  Q GG DQ             +   K   L +P++   +G KM  + 
Sbjct: 177 ----IDAQFGGVDQRKIFTFAEKYLPIMGYQKCIHLMNPMIPGLAGAKMSSSE 225


>gi|255711326|ref|XP_002551946.1| KLTH0B03608p [Lachancea thermotolerans]
 gi|238933324|emb|CAR21508.1| KLTH0B03608p [Lachancea thermotolerans]
          Length = 405

 Score = 54.1 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 36/246 (14%), Positives = 82/246 (33%), Gaps = 49/246 (19%)

Query: 18  IHQISNPRELDILCS--QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMG 75
           + ++ NP+ +  +    +  +  Y G   T    H G+   +  L    K G +   L+ 
Sbjct: 22  LQEVLNPQIIKNVLEVEKRPLKLYWGTAPTGRP-HCGYFVPMTKLADFLKAGCEVRVLLA 80

Query: 76  GGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSI 135
              + +      D  +  +  + ++   +  + +  S ++              +    I
Sbjct: 81  DLHAFL------DNMKAPL--EVVKYRAKYYECVIKSLLR--------------SINVPI 118

Query: 136 KYIDLLREIGSFFSVNRMLSFESVR----------SRLKRE------QSLSFLEFNYMIL 179
           + +D +  +GS + ++   + +  +           R   +        L      Y ++
Sbjct: 119 EKLDFV--VGSSYQLSSEYTMDIFKISNVVSQNDAKRAGADVVKQVANPL-LSGLIYPLM 175

Query: 180 QAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMG 238
           QA D   L       +Q GG DQ    +   +    L   K   L +P++     G KM 
Sbjct: 176 QALDEEHL----GVDVQFGGVDQRKIFVLAEENLPSLGYKKRAHLMNPMVPGLTQGGKMS 231

Query: 239 KTLSGA 244
            +   +
Sbjct: 232 ASDPNS 237


>gi|326471104|gb|EGD95113.1| tyrosyl-tRNA synthetase [Trichophyton tonsurans CBS 112818]
 gi|326479789|gb|EGE03799.1| tyrosyl-tRNA synthetase [Trichophyton equinum CBS 127.97]
          Length = 412

 Score = 54.1 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 37/229 (16%), Positives = 81/229 (35%), Gaps = 24/229 (10%)

Query: 18  IHQISNPRELDILC--SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMG 75
           + ++  P  L+ +       +  Y+G   T    H G+   ++ +    + G     L+ 
Sbjct: 18  LQEVLKPEILEDVIVKQNRPLKIYLGTATTGRP-HCGYFVPIVKIAHFLRAGCHVKILLA 76

Query: 76  GGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK--YGTGKTDALMLNNETWLC 133
                + +             + +    +  + + ++ +K  +   +    +L +   L 
Sbjct: 77  DIHGFLDNLKA--------PIELVNFRADYYRYVITAMLKAIHVPLEKLEFVLGSSYQLS 128

Query: 134 SIKYIDLLREIGSFFSV--NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +   +D+ R + S  +    +    E V+        LS L   Y ++QA D   L    
Sbjct: 129 AKYTMDIFR-LSSMVTEHDAKKAGAEVVKQ--VDNAPLSGL--IYPLMQALDEEHL---- 179

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           D   Q GG DQ        +   R+   +   L +P++   +G KM  +
Sbjct: 180 DVDAQFGGVDQRKIFTLAQETLPRIGYKERAHLMNPMVPGLAGGKMSAS 228


>gi|226470040|emb|CAX70301.1| tryptophanyl-tRNA synthetase [Schistosoma japonicum]
          Length = 326

 Score = 54.1 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 41/259 (15%), Positives = 85/259 (32%), Gaps = 34/259 (13%)

Query: 9   LSILSERGFIHQISNPRELDILCS-QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           L  L +R       +  E+ +    +     Y G   ++ +LH GH+   ++  W Q   
Sbjct: 67  LHHLLKRQIFFSHRDLEEIILRIEQKKPFFLYTGRGPSSEALHLGHVVPFIINKWFQD-- 124

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
                 +     +I          + +   E++      +      I  G       + +
Sbjct: 125 ------VFDVPLVIQLTDDEKFLWKNLSISEVRHLT---RENAKDIIAMGFDPKKTFIFS 175

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA------ 181
           N  ++      D  R +     + R++++   R+      S    + ++  +QA      
Sbjct: 176 NFEYMG--TCPDFYRTV---CQIQRLVTYNQARAIFGFNDSDCIGKISFPAIQAAPSFAQ 230

Query: 182 ---YDFVELAK--NYDCRLQMGGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTAS 233
                F  L K  +  C +     DQ        D+  RL  PK   ++++  P L    
Sbjct: 231 SFPTVFQNLKKPEDVGCLIPC-AIDQDPYFRMTRDVAPRLGLPKPSLIYSVFFPALQGNQ 289

Query: 234 GTKMGKTLSG-AIWLNKEM 251
            TKM  +    +++L    
Sbjct: 290 -TKMSASNPNTSVFLTDTP 307


>gi|326334110|ref|ZP_08200337.1| tryptophan--tRNA ligase [Nocardioidaceae bacterium Broad-1]
 gi|325948086|gb|EGD40199.1| tryptophan--tRNA ligase [Nocardioidaceae bacterium Broad-1]
          Length = 345

 Score = 53.7 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 58/296 (19%), Positives = 99/296 (33%), Gaps = 45/296 (15%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   TA S H G+    +  +   +  H+P   +    + I         R   R    Q
Sbjct: 16  GIQPTADSYHLGNYLGAVRQWVSLQEEHEPFFFIADLHA-ITVEQDPKVLRERTRRAAAQ 74

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
                +    S+          A +     W        +++ I SF    RM  F+   
Sbjct: 75  LLAAGVDPERSAIFVQSHLPEHAQL----GW--------VMQCITSFGEARRMTQFKD-- 120

Query: 161 SRLKREQS-LSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT- 218
              K  +   S   F+Y +L A D + L +     +   G DQ  ++    DL +R  + 
Sbjct: 121 KSAKGGEGAASVGLFSYPMLMAADIL-LYRPAYVPV---GEDQRQHLELTRDLAQRFNSR 176

Query: 219 -PKLFALTSPLLTTASGT---------KMGKTLSGAIWLNKEMTSPYNFWQYWRN-IDDA 267
             K F L  P +               KM K+ S    L   +  P    +  R+ + D+
Sbjct: 177 YKKTFRLPEPYILKEVAKIYDLQDPSIKMSKSASSPSGLIDMLDDPKVSAKKIRSAVTDS 236

Query: 268 DVV------------SFAKRLTTLPMSEIDR-MAKLQGKEINEAKKIIATEITTMV 310
           ++             +  +  + L  S+ID  + K  GK   + KK +A  +   V
Sbjct: 237 EMEIRFDEEAKPGVSNLLRIYSALTGSDIDTLVGKYAGKGYGDLKKDLAEVVVDYV 292


>gi|321251065|ref|XP_003191946.1| cytoplasmic tyrosyl-tRNA synthetase; Tys1p [Cryptococcus gattii
           WM276]
 gi|317458414|gb|ADV20159.1| Cytoplasmic tyrosyl-tRNA synthetase, putative; Tys1p [Cryptococcus
           gattii WM276]
          Length = 789

 Score = 53.7 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 38/227 (16%), Positives = 72/227 (31%), Gaps = 21/227 (9%)

Query: 18  IHQISNPRELDILCSQGVV-TAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGG 76
           + ++++   +  + S+G V  AY G   T    H  +   L+ +      G     L+  
Sbjct: 26  LQEVTSGDVIRKVLSEGKVVKAYWGTAPTGRP-HIAYCVPLLKIADFLTAGVHVKVLLAD 84

Query: 77  GTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA--LMLNNETWLCS 134
             + +               + +Q  ++    +  +         D    +  +   L  
Sbjct: 85  LHAFLDASKS--------TLETVQYRVKYYSKLLITVFTVLGVPIDKLEFITGSSYQLKP 136

Query: 135 IKYIDLLR-EIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDC 193
              +D+ R    +          + V+   + E  L      Y  LQA D   L    D 
Sbjct: 137 DYTLDMYRFHALTSTREAEHAGADVVK---ESESPL-MSSLLYPGLQALDEQYL----DV 188

Query: 194 RLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
             Q GG DQ    +       +L   K   L + ++   SG KM  +
Sbjct: 189 DFQFGGVDQRKIFMYAATFLPKLGYSKRAHLMNGMVPGLSGGKMSAS 235


>gi|268316605|ref|YP_003290324.1| tryptophanyl-tRNA synthetase [Rhodothermus marinus DSM 4252]
 gi|262334139|gb|ACY47936.1| tryptophanyl-tRNA synthetase [Rhodothermus marinus DSM 4252]
          Length = 331

 Score = 53.7 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 42/199 (21%), Positives = 64/199 (32%), Gaps = 46/199 (23%)

Query: 156 FESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER 215
            + V   L     L    FNY +LQA D +     Y   L   G+DQ  NI    D+ +R
Sbjct: 106 KDKVAQGLPANAGL----FNYPVLQAADILI----YGGTLVPVGADQKQNIEICRDIAQR 157

Query: 216 LK------TPKLFALTSPLL-------TTASGTKMGKTLSGAIWL-NKEMTSPYNFWQYW 261
                      LF +  PL+           G KM K+    I + ++  T      +  
Sbjct: 158 FNRTFCPPDRSLFPIPEPLIREEVAVVPGIDGRKMSKSYGNTIGIFDEGKT----LRKKV 213

Query: 262 RNI-DDA------------DVVSFAKRLTT-LPMSEIDRMAKLQGKEINEAKKIIATEIT 307
            +I  D+            +V +  K        + I    +  G    +AKK +   I 
Sbjct: 214 MSIVTDSTPLEAPKDPERCNVFALIKLFADEETRNRIAEAYRRGGYGYGDAKKELIRLI- 272

Query: 308 TMVHGREEAEKAATAAMEC 326
                 E   +A     E 
Sbjct: 273 -----DEHFAEARERRREL 286


>gi|327302612|ref|XP_003235998.1| tyrosyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
 gi|326461340|gb|EGD86793.1| tyrosyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
          Length = 412

 Score = 53.7 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 37/229 (16%), Positives = 81/229 (35%), Gaps = 24/229 (10%)

Query: 18  IHQISNPRELDILC--SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMG 75
           + ++  P  L+ +       +  Y+G   T    H G+   ++ +    + G     L+ 
Sbjct: 18  LQEVLKPEILEDVIVKQNRPLKIYLGTATTGRP-HCGYFVPIVKIAHFLRAGCHVKILLA 76

Query: 76  GGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK--YGTGKTDALMLNNETWLC 133
                + +             + +    +  + + ++ +K  +   +    +L +   L 
Sbjct: 77  DIHGFLDNLKA--------PIELVNFRADYYRYVITAMLKAIHVPLEKLEFVLGSSYQLS 128

Query: 134 SIKYIDLLREIGSFFSV--NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +   +D+ R + S  +    +    E V+        LS L   Y ++QA D   L    
Sbjct: 129 AKYTMDIFR-LSSMVTEHDAKKAGAEVVKQ--VDNAPLSGL--IYPLMQALDEEHL---- 179

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           D   Q GG DQ        +   R+   +   L +P++   +G KM  +
Sbjct: 180 DVDAQFGGVDQRKIFTLAQETLPRIGYKERAHLMNPMVPGLAGGKMSAS 228


>gi|302510002|ref|XP_003016961.1| hypothetical protein ARB_05255 [Arthroderma benhamiae CBS 112371]
 gi|291180531|gb|EFE36316.1| hypothetical protein ARB_05255 [Arthroderma benhamiae CBS 112371]
          Length = 412

 Score = 53.7 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 37/229 (16%), Positives = 81/229 (35%), Gaps = 24/229 (10%)

Query: 18  IHQISNPRELDILC--SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMG 75
           + ++  P  L+ +       +  Y+G   T    H G+   ++ +    + G     L+ 
Sbjct: 18  LQEVLKPEILEDVIVKQNRPLKIYLGTATTGRP-HCGYFVPIVKIAHFLRAGCHVKILLA 76

Query: 76  GGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK--YGTGKTDALMLNNETWLC 133
                + +             + +    +  + + ++ +K  +   +    +L +   L 
Sbjct: 77  DIHGFLDNLKA--------PIELVNFRADYYRYVITAMLKAIHVPLEKLEFVLGSSYQLS 128

Query: 134 SIKYIDLLREIGSFFSV--NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +   +D+ R + S  +    +    E V+        LS L   Y ++QA D   L    
Sbjct: 129 AKYTMDIFR-LSSMVTEHDAKKAGAEVVKQ--VDNAPLSGL--IYPLMQALDEEHL---- 179

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           D   Q GG DQ        +   R+   +   L +P++   +G KM  +
Sbjct: 180 DVDAQFGGVDQRKIFTLAQETLPRIGYKERAHLMNPMVPGLAGGKMSAS 228


>gi|73536116|pdb|2A4M|A Chain A, Structure Of Trprs Ii Bound To Atp
 gi|73536117|pdb|2A4M|B Chain B, Structure Of Trprs Ii Bound To Atp
 gi|73536118|pdb|2A4M|C Chain C, Structure Of Trprs Ii Bound To Atp
          Length = 331

 Score = 53.7 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 40/221 (18%), Positives = 61/221 (27%), Gaps = 30/221 (13%)

Query: 44  LTASSLHAGHLTQ-LMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN 102
            T + LH GHL   L     LQ    +   L+    ++          R     + +   
Sbjct: 11  PTGA-LHLGHLAGSLQNRVRLQDE-AELFVLLADVQALTDHF-----DRPEQVRENVLAV 63

Query: 103 IEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIG-SFFSVNRMLSFESVRS 161
                            KT  ++ +    L  +     L  +  S    N  +  E  + 
Sbjct: 64  ALDYLAAG-----LDPQKTTCVVQSAVPELAELTVY-FLNLVTVSHLRQNPTVKAEIAQK 117

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK---- 217
                    F  F Y + QA D       +   L   G DQ   +    ++  R      
Sbjct: 118 GYGERVPAGF--FVYPVSQAADIAA----FGATLVPVGDDQLPMLEQTREIVRRFNALYA 171

Query: 218 ----TPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTS 253
                P+      P L    G  KM K+L  AI L      
Sbjct: 172 PVLAEPQAQLSRVPRLPGLDGQAKMSKSLGNAIALGDSADE 212


>gi|302663819|ref|XP_003023547.1| hypothetical protein TRV_02294 [Trichophyton verrucosum HKI 0517]
 gi|291187550|gb|EFE42929.1| hypothetical protein TRV_02294 [Trichophyton verrucosum HKI 0517]
          Length = 431

 Score = 53.7 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 37/229 (16%), Positives = 81/229 (35%), Gaps = 24/229 (10%)

Query: 18  IHQISNPRELDILC--SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMG 75
           + ++  P  L+ +       +  Y+G   T    H G+   ++ +    + G     L+ 
Sbjct: 37  LQEVLKPEILEDVIVKQNRPLKIYLGTATTGRP-HCGYFVPIVKIAHFLRAGCHVKILLA 95

Query: 76  GGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK--YGTGKTDALMLNNETWLC 133
                + +             + +    +  + + ++ +K  +   +    +L +   L 
Sbjct: 96  DIHGFLDNLKA--------PIELVNFRADYYRYVITAMLKAIHVPLEKLEFVLGSSYQLS 147

Query: 134 SIKYIDLLREIGSFFSV--NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +   +D+ R + S  +    +    E V+        LS L   Y ++QA D   L    
Sbjct: 148 AKYTMDIFR-LSSMVTEHDAKKAGAEVVKQ--VDNAPLSGL--IYPLMQALDEEHL---- 198

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           D   Q GG DQ        +   R+   +   L +P++   +G KM  +
Sbjct: 199 DVDAQFGGVDQRKIFTLAQETLPRIGYKERAHLMNPMVPGLAGGKMSAS 247


>gi|71032793|ref|XP_766038.1| tryptophanyl-tRNA synthetase [Theileria parva strain Muguga]
 gi|68352995|gb|EAN33755.1| tryptophanyl-tRNA synthetase, putative [Theileria parva]
          Length = 579

 Score = 53.7 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 50/314 (15%), Positives = 98/314 (31%), Gaps = 50/314 (15%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSF 86
           LD          Y G   ++ +LH GHL   +   WLQK+ + P+ +M     +  D  F
Sbjct: 255 LDNYEKGNKFFIYTGRGPSSEALHLGHLIPFIFTCWLQKSFNVPVVIM-----LSDDEKF 309

Query: 87  RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGS 146
               R  +  + ++             I  G       +  N  ++  +    L  ++  
Sbjct: 310 --VFREELELENVRNLA---LENAKDIIAVGFDPELTFIFRNTDYIQHLYKTTL--KLQK 362

Query: 147 FFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY-----DFVELAKNYD---CRLQMG 198
             + N++    S          +     +Y +L+        F  L  N +   C +  G
Sbjct: 363 KTTFNQL--RGSFGFDYSTNVGM----ISYPLLEGAASFSESFPNLFNNKEDIMCLVPQG 416

Query: 199 GSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTASGTKMGKT-LSGAIWLNKEMTSP 254
             DQ         L  +L   K   + +   P L   +  KM  +    AI++  +  + 
Sbjct: 417 -IDQDPFFRLTRSLAPKLGLKKPALIHSKFIPSLLGIN-QKMSSSIEGSAIFVTDDAETI 474

Query: 255 YNFWQYWR----------------NIDDADVVSFAKRL--TTLPMSEIDRMAKLQGKEIN 296
                 +                 N++      +   L  +   + EI +  K      N
Sbjct: 475 KKKIHKYAFSGGRDTAKEHMELGPNLEVDVSYQYLNFLVESDEELEEITQKYKSGQMLTN 534

Query: 297 EAKKIIATEITTMV 310
           E K  +   +  ++
Sbjct: 535 ELKNKLVEILVPII 548


>gi|329766130|ref|ZP_08257689.1| tyrosyl-tRNA synthetase [Candidatus Nitrosoarchaeum limnia SFB1]
 gi|329137401|gb|EGG41678.1| tyrosyl-tRNA synthetase [Candidatus Nitrosoarchaeum limnia SFB1]
          Length = 348

 Score = 53.7 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 39/237 (16%), Positives = 81/237 (34%), Gaps = 32/237 (13%)

Query: 21  ISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQL-MLLFWLQKTGHKPISLMGGGTS 79
           +++   +++  +      YIG +++   LH G L      +    K G K    +    +
Sbjct: 19  VTHDELIELFKTNSSPKHYIGLEISG-FLHLGSLISTGFKINDFIKAGVKCTIFLADWHT 77

Query: 80  IIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIK--Y 137
           +I D    D            E I ++   +         +  A ++            +
Sbjct: 78  LINDKLGGD-----------WEMISRVSKYYKDAFNLVCPE--ANIVLGSDLYKEKSEYW 124

Query: 138 IDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQM 197
            +L++      S+ R +   ++  R + E+ +   +  Y  +QA D   L    D  +  
Sbjct: 125 SELVK-FTKHVSLARTMRTLTIMGRSENEEKIDLAKLLYPPMQAVDIHFL----DVDIAH 179

Query: 198 GGSDQWGNIICGIDLGERLKTPKLFALTSPLL-------TTASGT---KMGKTLSGA 244
            G DQ    +   ++  ++K     A+   LL       TT       KM K+   +
Sbjct: 180 AGMDQRKIHMLVREVFPKMKWKVPVAVHHKLLPGLSKPATTNDSQILGKMSKSDPNS 236


>gi|302348317|ref|YP_003815955.1| Tryptophanyl-tRNA synthetase [Acidilobus saccharovorans 345-15]
 gi|302328729|gb|ADL18924.1| Tryptophanyl-tRNA synthetase [Acidilobus saccharovorans 345-15]
          Length = 373

 Score = 53.7 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 53/268 (19%), Positives = 93/268 (34%), Gaps = 49/268 (18%)

Query: 6   SDFLSILSE----------RGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHL 54
           S+ L  L            RG I    +    L+   S   V    G+  +    H GH+
Sbjct: 31  SEILEKLKSMGVEPSAFMRRGIIFGHRDMDVVLNAWASGEPVAVVTGFMPSGQF-HFGHM 89

Query: 55  TQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFI 114
              + L + Q+ G +    M    +           RR+ R + I+  +E+      +  
Sbjct: 90  LTGLQLVFYQRLGFRVFVCMADAEAYA--------VRRVSREEAIKSALEEFIPNLLALG 141

Query: 115 KYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEF 174
                +T+              Y +L++   +  + N M   E++   L   + +S    
Sbjct: 142 -LDPQRTEFYFQTGREG----PYHELIQLFSAKVTFNEM---EAIYGDLSPAKVMS---- 189

Query: 175 NYMILQAYDFVE-LAKNYD----CRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSP-- 227
              + QA D +  + K Y       + +G  DQ  +I    D+  R+K      LT P  
Sbjct: 190 --ALTQAADILHPMLKEYGGYKYVVVPVGA-DQDPHIRLSRDIATRMKGE--IELTPPAA 244

Query: 228 ----LLTTASGTKMGKTLSGA-IWLNKE 250
               L+    G KM K+   A I+L + 
Sbjct: 245 TYHKLIRGLDGGKMSKSRPEATIFLTEP 272


>gi|195591193|ref|XP_002085327.1| GD14730 [Drosophila simulans]
 gi|194197336|gb|EDX10912.1| GD14730 [Drosophila simulans]
          Length = 664

 Score = 53.7 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 41/251 (16%), Positives = 74/251 (29%), Gaps = 38/251 (15%)

Query: 28  DILCSQGVVTAYIGYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSIIGDPSF 86
           +   S+     + G   T  SLH G+    +     LQ         +          S 
Sbjct: 72  EEHNSRWPRKIFSGIQPTG-SLHLGNYLGAVRKWVELQNARDDVTVCIVDL------HSI 124

Query: 87  RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGS 146
                  +  + I      +             K+   + +         +I  L  + +
Sbjct: 125 TMPHNPPLLRENIFTMAATLLACG-----IDPTKSTLFVQSAVAEHAEFNWI--LSSLTT 177

Query: 147 FFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNI 206
              + ++  F   +SRL ++  L    + Y +LQA D + L K+    +   G+DQ  +I
Sbjct: 178 MPRLAQLPQFRE-KSRLLKDVPLGL--YVYPVLQAAD-IMLYKSTHVPV---GADQIQHI 230

Query: 207 ICGIDLGERLKTPKLFALTSPLLT--TASG------------TKMGKTLSGAIWLNKEMT 252
                L         +  T P+ T     G             KM K+ +          
Sbjct: 231 QLAQHLSRIYNGR--YGETFPVCTAIIEDGDASRVLSLRDPSKKMSKSEANPKATINLCD 288

Query: 253 SPYNFWQYWRN 263
           SP    Q  + 
Sbjct: 289 SPDLITQKIKK 299


>gi|66803753|gb|AAY56636.1| unknown [Drosophila simulans]
          Length = 665

 Score = 53.7 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 41/251 (16%), Positives = 74/251 (29%), Gaps = 38/251 (15%)

Query: 28  DILCSQGVVTAYIGYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSIIGDPSF 86
           +   S+     + G   T  SLH G+    +     LQ         +          S 
Sbjct: 72  EEHNSRWPRKIFSGIQPTG-SLHLGNYLGAVRKWVELQNARDDVTVCIVDL------HSI 124

Query: 87  RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGS 146
                  +  + I      +             K+   + +         +I  L  + +
Sbjct: 125 TMPHNPPLLRENIFTMAATLLACG-----IDPTKSTLFVQSAVAEHAEFNWI--LSSLTT 177

Query: 147 FFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNI 206
              + ++  F   +SRL ++  L    + Y +LQA D + L K+    +   G+DQ  +I
Sbjct: 178 MPRLAQLPQFRE-KSRLLKDVPLGL--YVYPVLQAAD-IMLYKSTHVPV---GADQIQHI 230

Query: 207 ICGIDLGERLKTPKLFALTSPLLT--TASG------------TKMGKTLSGAIWLNKEMT 252
                L         +  T P+ T     G             KM K+ +          
Sbjct: 231 QLAQHLSRIYNGR--YGETFPVCTAIIEDGDASRVLSLRDPSKKMSKSEANPKATINLCD 288

Query: 253 SPYNFWQYWRN 263
           SP    Q  + 
Sbjct: 289 SPDLITQKIKK 299


>gi|83814349|ref|YP_445783.1| tryptophanyl-tRNA synthetase [Salinibacter ruber DSM 13855]
 gi|294507684|ref|YP_003571742.1| Tryptophanyl-tRNA synthetase [Salinibacter ruber M8]
 gi|83755743|gb|ABC43856.1| tryptophanyl-tRNA synthetase [Salinibacter ruber DSM 13855]
 gi|294344012|emb|CBH24790.1| Tryptophanyl-tRNA synthetase [Salinibacter ruber M8]
          Length = 344

 Score = 53.7 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 56/198 (28%), Gaps = 44/198 (22%)

Query: 156 FESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER 215
            + V + L     L    FNY +LQA D +     Y   L   G+DQ  N+    DL  R
Sbjct: 125 KDKVEAGLTPNAGL----FNYPVLQAADILA----YGGSLVPVGADQKQNLEIARDLARR 176

Query: 216 LKT-------------PKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWR 262
                                    ++    G KM K+    I +  E        +   
Sbjct: 177 FNNRFCPEDEPLLPVPEPQILDDVAVVPGTDGRKMSKSYDNTIGIFDEGD---ALEEKVM 233

Query: 263 NI-DDA------------DVVSFAKRLTT-LPMSEIDRMAKLQGKEINEAKKIIATEITT 308
           NI  D+            +V +            EI    +  G     AK+ +   I  
Sbjct: 234 NIVTDSTPLDAPKDPASCNVFALITLFADAETQQEIADKYRAGGYGYGHAKQALQELI-- 291

Query: 309 MVHGREEAEKAATAAMEC 326
                E   +A     + 
Sbjct: 292 ----EEHFAEARARRKDL 305


>gi|51245496|ref|YP_065380.1| tryptophanyl-tRNA synthetase [Desulfotalea psychrophila LSv54]
 gi|50876533|emb|CAG36373.1| probable tryptophanyl-tRNA ligase [Desulfotalea psychrophila LSv54]
          Length = 325

 Score = 53.7 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 33/225 (14%), Positives = 74/225 (32%), Gaps = 36/225 (16%)

Query: 33  QGVVTAYIGYDLTASSLHAGHLTQLM--LLFWLQKTGHKPISLMGGGTSIIGDPSFRDES 90
           + ++    G   +   LH G+   +M  ++  ++ +      +     + + DP      
Sbjct: 2   KEIMKILSGIQPSGQ-LHIGNYFGMMQTMIDQMESSDLHVFIVDYHALTSVRDP------ 54

Query: 91  RRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCS-IKYIDLLREIGSFFS 149
            +++    ++   + +             ++D   +    WL S +  + L+    S+  
Sbjct: 55  -KVLAKGTLEAAADFLALGLDPDKCTFWVQSDVPAVCELMWLLSVLTPMGLVERCHSY-- 111

Query: 150 VNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICG 209
                  + V   ++    L    F+Y +L A D +     Y   +   G DQ  ++   
Sbjct: 112 ------KDKVAKGIQASHGL----FSYPVLMAADILL----YQADIVPVGKDQKQHLEFA 157

Query: 210 IDLGERLKTPKLFALTSP---------LLTTASGTKMGKTLSGAI 245
            DL ++         T P          +    G KM K+    I
Sbjct: 158 RDLAQKFNNEYGETFTIPEPGISKHTATIPGLDGQKMSKSYGNTI 202


>gi|288924622|ref|ZP_06418559.1| tryptophan--tRNA ligase [Prevotella buccae D17]
 gi|288338409|gb|EFC76758.1| tryptophan--tRNA ligase [Prevotella buccae D17]
          Length = 362

 Score = 53.7 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 44/236 (18%), Positives = 68/236 (28%), Gaps = 35/236 (14%)

Query: 44  LTASSLHAGHLTQ-LMLLFWLQKTG--HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    L     LQ  G   +    M    ++  +    ++ R+ M    + 
Sbjct: 11  PTGK-LHLGHYVGSLRRRVQLQNAGDYERMFVFMADVQALTDNADNPEKIRQNMMEVALD 69

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
                +             K    + +    L  +    +     S    N  +  E   
Sbjct: 70  YLAAGL----------DPEKCTLFVQSQIPELAELTTYLMNLITVSRVQRNPTVKTEIKM 119

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
              +    L F  F Y + QA D + L K         G DQ   +    +L  R     
Sbjct: 120 RNFEANIPLGF--FCYPVSQAAD-IALFKATTVP---AGEDQEPMLEVTRELVRRFNQTY 173

Query: 221 LFALTSPL-----------LTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNI 264
              L  P            L    G  KM K+L   I+L+         WQ  R++
Sbjct: 174 GEVLVEPAIMLPENATARRLPGTDGKEKMSKSLGNCIYLSDSA---EEVWQKVRSM 226


>gi|62903516|sp|Q9RVD6|SYW2_DEIRA RecName: Full=Tryptophanyl-tRNA synthetase 2; AltName:
           Full=Tryptophan--tRNA ligase II; Short=TrpRS II;
           AltName: Full=Tryptophanyl-tRNA synthetase II
 gi|61680678|pdb|1YI8|B Chain B, Crystal Structure Of Tryptophanyl Trrna Synthetase Ii From
           Deinococcus Radiodurans In Complex With L-Trp
 gi|61680679|pdb|1YI8|A Chain A, Crystal Structure Of Tryptophanyl Trrna Synthetase Ii From
           Deinococcus Radiodurans In Complex With L-Trp
 gi|61680680|pdb|1YI8|C Chain C, Crystal Structure Of Tryptophanyl Trrna Synthetase Ii From
           Deinococcus Radiodurans In Complex With L-Trp
 gi|61680681|pdb|1YIA|B Chain B, Crystal Structure Of Tryptophanyl Trna Synthetase Ii From
           Deinococcus Radiodurans In Complex With 5-Hydroxy
           Tryptophan.
 gi|61680682|pdb|1YIA|A Chain A, Crystal Structure Of Tryptophanyl Trna Synthetase Ii From
           Deinococcus Radiodurans In Complex With 5-Hydroxy
           Tryptophan.
 gi|61680683|pdb|1YIA|C Chain C, Crystal Structure Of Tryptophanyl Trna Synthetase Ii From
           Deinococcus Radiodurans In Complex With 5-Hydroxy
           Tryptophan.
 gi|73535683|pdb|1YID|B Chain B, Crystal Structure Of Tryptophanyl Trna Synthetase Ii From
           Deinococcus Radiodurans In Complex With Atp.
 gi|73535684|pdb|1YID|A Chain A, Crystal Structure Of Tryptophanyl Trna Synthetase Ii From
           Deinococcus Radiodurans In Complex With Atp.
 gi|73535685|pdb|1YID|C Chain C, Crystal Structure Of Tryptophanyl Trna Synthetase Ii From
           Deinococcus Radiodurans In Complex With Atp.
 gi|6458825|gb|AAF10665.1|AE001959_5 tryptophanyl-tRNA synthetase [Deinococcus radiodurans R1]
          Length = 351

 Score = 53.7 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 40/221 (18%), Positives = 61/221 (27%), Gaps = 30/221 (13%)

Query: 44  LTASSLHAGHLTQ-LMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN 102
            T + LH GHL   L     LQ    +   L+    ++          R     + +   
Sbjct: 31  PTGA-LHLGHLAGSLQNRVRLQDE-AELFVLLADVQALTDHF-----DRPEQVRENVLAV 83

Query: 103 IEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIG-SFFSVNRMLSFESVRS 161
                            KT  ++ +    L  +     L  +  S    N  +  E  + 
Sbjct: 84  ALDYLAAG-----LDPQKTTCVVQSAVPELAELTVY-FLNLVTVSHLRQNPTVKAEIAQK 137

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK---- 217
                    F  F Y + QA D       +   L   G DQ   +    ++  R      
Sbjct: 138 GYGERVPAGF--FVYPVSQAADIAA----FGATLVPVGDDQLPMLEQTREIVRRFNALYA 191

Query: 218 ----TPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTS 253
                P+      P L    G  KM K+L  AI L      
Sbjct: 192 PVLAEPQAQLSRVPRLPGLDGQAKMSKSLGNAIALGDSADE 232


>gi|161579488|ref|NP_294817.2| tryptophanyl-tRNA synthetase II [Deinococcus radiodurans R1]
          Length = 341

 Score = 53.7 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 40/221 (18%), Positives = 61/221 (27%), Gaps = 30/221 (13%)

Query: 44  LTASSLHAGHLTQ-LMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN 102
            T + LH GHL   L     LQ    +   L+    ++          R     + +   
Sbjct: 21  PTGA-LHLGHLAGSLQNRVRLQDE-AELFVLLADVQALTDHF-----DRPEQVRENVLAV 73

Query: 103 IEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIG-SFFSVNRMLSFESVRS 161
                            KT  ++ +    L  +     L  +  S    N  +  E  + 
Sbjct: 74  ALDYLAAG-----LDPQKTTCVVQSAVPELAELTVY-FLNLVTVSHLRQNPTVKAEIAQK 127

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK---- 217
                    F  F Y + QA D       +   L   G DQ   +    ++  R      
Sbjct: 128 GYGERVPAGF--FVYPVSQAADIAA----FGATLVPVGDDQLPMLEQTREIVRRFNALYA 181

Query: 218 ----TPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTS 253
                P+      P L    G  KM K+L  AI L      
Sbjct: 182 PVLAEPQAQLSRVPRLPGLDGQAKMSKSLGNAIALGDSADE 222


>gi|28572846|ref|NP_789626.1| tryptophanyl-tRNA synthetase [Tropheryma whipplei TW08/27]
 gi|39932167|sp|Q83HC3|SYW_TROW8 RecName: Full=Tryptophanyl-tRNA synthetase; AltName:
           Full=Tryptophan--tRNA ligase; Short=TrpRS
 gi|28410979|emb|CAD67364.1| tryptophanyl-tRNA synthetase [Tropheryma whipplei TW08/27]
          Length = 335

 Score = 53.7 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 45/259 (17%), Positives = 90/259 (34%), Gaps = 40/259 (15%)

Query: 31  CSQGVVTAYIGYDLTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSIIGDPSFRDE 89
            ++  V    G   ++  LH G+    +  F  +Q   +    ++    S+        +
Sbjct: 8   INKKPVVL-SGIQPSSGMLHLGNYLGALKSFGRMQD-DYTTYFMLANLHSMT-----FPQ 60

Query: 90  SRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFS 149
           +  ++R   I+   + I             ++D    N   W        +L  + +F  
Sbjct: 61  NPEVLRENTIRIAAQCIAAGIDPAKSIVFLQSDVYQHNQLAW--------VLGNVCTFGE 112

Query: 150 VNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICG 209
             RM      + +  ++ ++S   F Y IL A D +     YD      G+DQ  ++   
Sbjct: 113 AARMTQ---FKDKSGKQGNISTGLFTYPILMASDILL----YDSAFVPVGADQKQHLELT 165

Query: 210 IDLGE----RLKT----PKLFALTSPLLTTAS-GTKMGKT---LSGAIWLNKEMTSPYNF 257
             L      +       P+ F  +  +        KM K+    SG I+L   + SP   
Sbjct: 166 RTLARRFNAQYGQTFLVPQPFECSIRIYDLQDPAVKMSKSSATESGTIFL---LDSPDKI 222

Query: 258 WQYWR-NIDD-ADVVSFAK 274
            +    ++ D  DV+ + +
Sbjct: 223 VKKIMRSVTDSEDVIGYDR 241


>gi|195494708|ref|XP_002094954.1| GE19932 [Drosophila yakuba]
 gi|194181055|gb|EDW94666.1| GE19932 [Drosophila yakuba]
          Length = 662

 Score = 53.7 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 44/257 (17%), Positives = 80/257 (31%), Gaps = 38/257 (14%)

Query: 22  SNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSII 81
           +     +   S+     + G   T  SLH G+    +   W+Q    +        T  I
Sbjct: 64  TGDSGHEEHNSRWQRKIFSGIQPTG-SLHLGNYLGAVR-KWVQLQNAR-----DDVTVCI 116

Query: 82  GD-PSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDL 140
            D  S        +  + I      +             K+   + +         +I  
Sbjct: 117 VDLHSITMPHNPPLLRENIFTMAATLLACG-----IDPTKSTLFVQSAVAAHAEFNWI-- 169

Query: 141 LREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGS 200
           L  + +   + ++  F   +SRL ++  L    + Y +LQA D + L K     +   G+
Sbjct: 170 LSSLTTMPRLAQLPQFRE-KSRLLKDVPLGL--YVYPVLQAAD-IMLYKATHVPV---GA 222

Query: 201 DQWGNIICGIDLGERLKTPKLFALTSPLLT--TASG------------TKMGKTLSGAIW 246
           DQ  +I     L +   +   +  T P+ T     G             KM K+ +    
Sbjct: 223 DQIQHIQLAQHLAKTYNSR--YGETFPVCTAIIEDGDASRVLSLRDPSKKMSKSEANPKA 280

Query: 247 LNKEMTSPYNFWQYWRN 263
                 SP    Q  + 
Sbjct: 281 TINLCDSPDLITQKIKK 297


>gi|119627913|gb|EAX07508.1| tyrosyl-tRNA synthetase, isoform CRA_b [Homo sapiens]
          Length = 246

 Score = 53.7 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 43/234 (18%), Positives = 71/234 (30%), Gaps = 23/234 (9%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R    ++    +L  +  +  +  Y G   T    H  +   +  +    K G +  
Sbjct: 13  LITRNL-QEVLGEEKLKEILKERELKIYWGTATTGKP-HVAYFVPMSKIADFLKAGCEVT 70

Query: 72  SLMGGGTSII---GDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
            L     + +     P    E R       I+  +E I       +K+  G         
Sbjct: 71  ILFADLHAYLDNMKAPWELLELRVSYYENVIKAMLESIGVPLEK-LKFIKGTDYQ----- 124

Query: 129 ETWLCSIKYIDLLREIGSFFSV-NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
              L     +D+ R         ++    E V+   + E  L      Y  LQA D   L
Sbjct: 125 ---LSKEYTLDVYRLSSVVTQHDSKKAGAEVVK---QVEHPL-LSGLLYPGLQALDEEYL 177

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
                   Q GG DQ             L   K   L +P++   +G+KM  + 
Sbjct: 178 K----VDAQFGGIDQRKIFTFAEKYLPALGYSKRVHLMNPMVPGLTGSKMSSSE 227


>gi|158299412|ref|XP_319546.4| AGAP003315-PA [Anopheles gambiae str. PEST]
 gi|157013855|gb|EAA14646.4| AGAP003315-PA [Anopheles gambiae str. PEST]
          Length = 423

 Score = 53.7 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 20/127 (15%), Positives = 45/127 (35%), Gaps = 12/127 (9%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVV-TAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           +  L  RG      +   L      G     Y G   ++ S+H GHL   ++  WLQ+  
Sbjct: 75  VHHLIRRGIFFSHRDLHTLLNAVEAGKKFYLYTGRGPSSDSMHLGHLVPFIVTKWLQEAF 134

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
             P+ +              D+ + + +   +++++   +      I  G   +   + +
Sbjct: 135 DVPLVI-----------QLTDDEKTLWKDLTVEQSMRMARENAKDIIAIGFDPSKTFIFS 183

Query: 128 NETWLCS 134
           N  ++  
Sbjct: 184 NLDFMGQ 190


>gi|86140014|ref|ZP_01058578.1| RNA pseudouridylate synthase family protein [Roseobacter sp.
           MED193]
 gi|85823264|gb|EAQ43475.1| RNA pseudouridylate synthase family protein [Roseobacter sp.
           MED193]
          Length = 394

 Score = 53.7 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 24/54 (44%), Gaps = 1/54 (1%)

Query: 344 DEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
           D    G  +  ++ +AG   S  EA R +    +K+N + I +  L +  +D  
Sbjct: 35  DSAPAGDRIAKVLSRAG-VASRREAERMIAEGRVKVNGTKIDSPALNVTERDRI 87


>gi|257784456|ref|YP_003179673.1| tryptophanyl-tRNA synthetase [Atopobium parvulum DSM 20469]
 gi|257472963|gb|ACV51082.1| tryptophanyl-tRNA synthetase [Atopobium parvulum DSM 20469]
          Length = 349

 Score = 53.7 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 37/237 (15%), Positives = 72/237 (30%), Gaps = 31/237 (13%)

Query: 22  SNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSI 80
           S+  + D+    G      G   T   LH GH    ++    LQ  G     ++      
Sbjct: 14  SDEIQADLAEHAGKYNMLTGDRPTGR-LHLGHYFGTIVERVRLQNLGVHTNIIIADYQV- 71

Query: 81  IGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG-TGKTDALMLNNETWLCSIKYID 139
                       +      +   + +  +   ++  G   +   +  ++     +   + 
Sbjct: 72  ------------ITDRDTTEHIADNVYNMVIDYLACGIDPEKTMIFTHSAVPALNQLMLP 119

Query: 140 LLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGG 199
            L  +                 +     +L+ L   Y + QA D   L    +      G
Sbjct: 120 FLSLVSESELHRNPTVK---AEQEASGHALTGLLLTYPVHQACD--ILFCKGNVV--PVG 172

Query: 200 SDQWGNIICGIDLGERLKT------PKLFAL--TSPLLTTASGTKMGKTLSGAIWLN 248
            DQ  +I     +  R         P++  L  ++PL+    G KM K+   AI L+
Sbjct: 173 RDQLPHIEITSKIARRFNERYGKVFPEVSGLLTSTPLIPGLDGRKMSKSYGNAISLS 229


>gi|15229319|ref|NP_187110.1| tRNA synthetase class I (W and Y) family protein [Arabidopsis
           thaliana]
 gi|145331754|ref|NP_001078104.1| tRNA synthetase class I (W and Y) family protein [Arabidopsis
           thaliana]
 gi|6175164|gb|AAF04890.1|AC011437_5 putative tryptophanyl-tRNA synthetase [Arabidopsis thaliana]
 gi|19310593|gb|AAL85027.1| putative tryptophanyl-tRNA synthetase [Arabidopsis thaliana]
 gi|21436361|gb|AAM51350.1| putative tryptophanyl-tRNA synthetase [Arabidopsis thaliana]
 gi|110740619|dbj|BAE98413.1| putative tryptophanyl-tRNA synthetase [Arabidopsis thaliana]
 gi|332640582|gb|AEE74103.1| tryptophanyl-tRNA synthetase [Arabidopsis thaliana]
 gi|332640584|gb|AEE74105.1| tryptophanyl-tRNA synthetase [Arabidopsis thaliana]
          Length = 402

 Score = 53.7 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 54/325 (16%), Positives = 96/325 (29%), Gaps = 52/325 (16%)

Query: 25  RELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDP 84
             LD          Y G   ++ +LH GHL   M   +LQ+    P+ +           
Sbjct: 78  EILDAYERGDKFYLYTGRGPSSEALHLGHLIPFMFTKYLQEAFKVPLVIQLTDDEKSIWK 137

Query: 85  SFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREI 144
           +   E  + +  +  ++ I     +  +FI             N            + ++
Sbjct: 138 NLSVEESQRLARENAKDIIACGFDVTKTFIFSDFDYVGGAFYKN------------MVKV 185

Query: 145 GSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY-----DFVELA---KNYDCRLQ 196
           G   ++N+ +           E  ++ L F    +QA       F  L     N  C + 
Sbjct: 186 GKCVTLNKAMG--IFG--FSGEDPIAKLSF--PPVQAVPSFPSSFPHLFPGKDNLRCLIP 239

Query: 197 MGGSDQWGNIICGIDLGERLK-TPKLFA--LTSPLLTTASGTKMGKTLSG-AIWL-NKEM 251
               DQ        D+  RL  +          P L   +G KM  +    AI++ +   
Sbjct: 240 C-AIDQDPYFRMTRDVAPRLGYSKPALIESTFFPALQGENG-KMSASDPNSAIYVTDSAK 297

Query: 252 TSPYNFWQYWRNIDDADVVSFAKR------------LT-TLPMSEIDRMAKLQGKEIN-- 296
                  +Y  +     +    +             L+  L         K +  E    
Sbjct: 298 DIKNKINRYAFSGGQDSIEKHRELGANLEVDIPVKYLSFFLEDDSELEHIKKEYGEGRML 357

Query: 297 --EAKKIIATEITTMV--HGREEAE 317
             E KK +   +T +V  H R  A 
Sbjct: 358 TGEVKKRLTEVLTEIVERHRRARAA 382


>gi|269794010|ref|YP_003313465.1| tryptophanyl-tRNA synthetase [Sanguibacter keddieii DSM 10542]
 gi|269096195|gb|ACZ20631.1| tryptophanyl-tRNA synthetase [Sanguibacter keddieii DSM 10542]
          Length = 362

 Score = 53.3 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 46/286 (16%), Positives = 89/286 (31%), Gaps = 45/286 (15%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN 102
            T + LH GH    +     LQ+ G + + ++     +I D     + R  +R   +   
Sbjct: 44  PTGA-LHVGHYFGTLTNRARLQQAGVELLMVIADY-QVITDRDEPGDLRSTVREILLDYQ 101

Query: 103 IEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR 162
              I             +   +  ++     +   +  L  +            E V  R
Sbjct: 102 AAGI-----------DPERTTVFTHSAVPALNQLVLPFLSLMSVAELERNPTVKEEV--R 148

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK----- 217
               +++S L   Y + QA D   L    +  L   G DQ  ++     +  R       
Sbjct: 149 ASGGRAMSGLMLTYPVHQAAD--ILFCRAN--LVPVGQDQLPHLEATRTVARRFNHRFSP 204

Query: 218 ------TPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDAD--- 268
                  P      SP +  + G KM K+   ++ ++        F +  R + DA+   
Sbjct: 205 ACPYFPEPDALLAPSPTILGSDGAKMSKSRGNSLLVSATEDETAAFVR--RCVTDAERHV 262

Query: 269 ---------VVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
                    V +     +    +  + +A   G +     K + TE
Sbjct: 263 TYEPDRRPGVANLLTLASLCTGAPPEAVADEVGAQGAGVLKALVTE 308


>gi|222099153|ref|YP_002533721.1| Tryptophanyl-tRNA synthetase [Thermotoga neapolitana DSM 4359]
 gi|281411713|ref|YP_003345792.1| tryptophanyl-tRNA synthetase [Thermotoga naphthophila RKU-10]
 gi|221571543|gb|ACM22355.1| Tryptophanyl-tRNA synthetase [Thermotoga neapolitana DSM 4359]
 gi|281372816|gb|ADA66378.1| tryptophanyl-tRNA synthetase [Thermotoga naphthophila RKU-10]
          Length = 328

 Score = 53.3 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 44/221 (19%), Positives = 74/221 (33%), Gaps = 36/221 (16%)

Query: 41  GYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           G   T   LH GHL   L     LQ+ G++    +    ++                 ++
Sbjct: 6   GMRPTGK-LHIGHLVGALENWVKLQEEGNECFYFVADWHAL------------TTHYDDV 52

Query: 100 QENIEKIKGIFSSFIKYG-TGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
               E  + +   F+  G   +   + + +       ++ +L        SV+R L    
Sbjct: 53  SRLKEYTRDLVRGFLACGIDPEKSVVFVQS----GVKEHAELALLFSMIVSVSR-LERVP 107

Query: 159 VRSRLKRE---QSLSFLEFN-YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
               +K+E   + LS   F  Y +LQA D + + K     +   G DQ  +I    ++  
Sbjct: 108 TYKEIKKELNYKDLSTAGFLIYPVLQAADIL-IYKAEGVPV---GEDQVYHIELTREIAR 163

Query: 215 RLK--------TPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
           R           P       P L    G KM K+    I L
Sbjct: 164 RFNHLYAEVFPEPDAILSRVPKLPGTDGRKMSKSYGNIINL 204


>gi|291295322|ref|YP_003506720.1| tryptophanyl-tRNA synthetase [Meiothermus ruber DSM 1279]
 gi|290470281|gb|ADD27700.1| tryptophanyl-tRNA synthetase [Meiothermus ruber DSM 1279]
          Length = 346

 Score = 53.3 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 35/245 (14%), Positives = 78/245 (31%), Gaps = 38/245 (15%)

Query: 37  TAYIGYDLTASSLHAGHLTQLML--LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMM 94
             + G+  T   LH G+    M+  +   +K G   I  +    +     ++  +   ++
Sbjct: 3   RVFSGFQPTGD-LHIGNYLGAMVNYIALGEKLGQDAIYCIVDYHAPTNPVAYDKD---LL 58

Query: 95  RSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRML 154
           R +  +  +  I                 L + +       ++ +L     +      + 
Sbjct: 59  RQRTFEAALVNIAAGL-------DPNKVILFVQSHV----PEHTELAWIFTTQTPYGDLT 107

Query: 155 SFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
                + +  + +S+      Y +L A D + L K     +   G DQ  ++    ++  
Sbjct: 108 RMTQFKDKAAKLESVPAGLLMYPVLMAADIL-LYKADTVPV---GDDQTQHLELTREIAR 163

Query: 215 RLKTPKLFALTSP-----------LLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWR 262
           R      +  T P            +    G  KM K++   I L ++     + W   R
Sbjct: 164 RWNQT--YGETFPEPEIYLNPHAPRVPGIDGKAKMSKSVGNTIGLLEDE---ESIWAKIR 218

Query: 263 NIDDA 267
            + D 
Sbjct: 219 TMPDD 223


>gi|262038551|ref|ZP_06011920.1| tryptophan--tRNA ligase [Leptotrichia goodfellowii F0264]
 gi|261747420|gb|EEY34890.1| tryptophan--tRNA ligase [Leptotrichia goodfellowii F0264]
          Length = 322

 Score = 53.3 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 45/291 (15%), Positives = 88/291 (30%), Gaps = 43/291 (14%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   + + LH G+    +  F   +  ++ +  +    ++   P   D  R  + +  I 
Sbjct: 6   GIQPSGN-LHIGNYFGAIKQFVEFQDKYEGLYFLANYHALTSSPKGEDLKRNTVNA--IL 62

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETW-LCSIKYIDLLREIGSFFSVNRMLSFESV 159
           + +        S I   +   +   L   +W L ++  + LL    S+         +  
Sbjct: 63  DYLALGLDPEKSIIFLQSDVPEHTEL---SWILANVAPMGLLERAHSY--------KDKT 111

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-- 217
              +K    L    F Y IL A D +     YD  +   G DQ  ++    D+  +    
Sbjct: 112 AKGIKPNVGL----FTYPILMAADILM----YDPDVVPVGKDQKQHVEITRDIAIKFNET 163

Query: 218 -TPKLFAL-------TSPLLTTASGTKMGKTLSGAI-WLNKEMTSPYNFWQYWRNI---- 264
              ++F L          ++    G KM K+    I     +            +     
Sbjct: 164 YGKEVFKLPEEKIVENVAVVPGVDGDKMSKSYGNVINMFIPKKEIKKQIMGIVTDSTPLE 223

Query: 265 ----DDADVVSFAKRL-TTLPMSEIDRMAKLQGKEINEAKKIIATEITTMV 310
                D ++      L T   + E+ R           AK  +  +     
Sbjct: 224 EPKNPDNNITKLYSLLATEAEVEEMKRKFSEGNYGYGHAKNELFEKFIDYF 274


>gi|134106229|ref|XP_778125.1| hypothetical protein CNBA1270 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50260828|gb|EAL23478.1| hypothetical protein CNBA1270 [Cryptococcus neoformans var.
           neoformans B-3501A]
          Length = 819

 Score = 53.3 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 40/227 (17%), Positives = 73/227 (32%), Gaps = 18/227 (7%)

Query: 18  IHQISNPRELDILCSQGVV-TAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGG 76
           + ++++   +  + S+G V  AY G   T    H  +   L+ +      G     L+ G
Sbjct: 26  LQEVTSGDVIRKVLSEGKVVKAYWGTAPTGRP-HIAYCVPLLKIADFLTAGVNVKVLLAG 84

Query: 77  GTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA--LMLNNETWLCS 134
              +                + +Q  ++    +  +        TD    +  +   L  
Sbjct: 85  ELILHAFLDASKS-----TLETVQYRVKYYSKLLITVFTVLGVPTDKLEFITGSSYQLKP 139

Query: 135 IKYIDLLR-EIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDC 193
              +D+ R    +          + V+   + E  L      Y  LQA D   L    D 
Sbjct: 140 DYTLDVYRFHALTSTREAEHAGADVVK---ESESPL-MSSLLYPGLQALDEQYL----DV 191

Query: 194 RLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
             Q GG DQ    +       +L   K   L + ++   SG KM  +
Sbjct: 192 DFQFGGVDQRKIFMYAATFLPKLGYSKRAHLMNAMVPGLSGGKMSAS 238


>gi|50954255|ref|YP_061543.1| tryptophanyl-tRNA synthetase [Leifsonia xyli subsp. xyli str.
           CTCB07]
 gi|71657986|sp|Q6AGQ7|SYW_LEIXX RecName: Full=Tryptophanyl-tRNA synthetase; AltName:
           Full=Tryptophan--tRNA ligase; Short=TrpRS
 gi|50950737|gb|AAT88438.1| tryptophanyl-tRNA synthetase [Leifsonia xyli subsp. xyli str.
           CTCB07]
          Length = 337

 Score = 53.3 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 52/301 (17%), Positives = 90/301 (29%), Gaps = 63/301 (20%)

Query: 37  TAYIGYDLTASSLHAGHLTQLMLLFWLQ--KTGHKPISLMGGGTSI--IGDPSFRDESRR 92
             Y G   +A SLH G+      L   +  +  H     +    +I    DP        
Sbjct: 6   RLYSGMQPSADSLHLGNYVG--ALLQWKELQAAHDAFFSVVDLHAITVAQDPHD------ 57

Query: 93  MMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNR 152
            +R +  +   + I       +     ++         W        +L  I  +    R
Sbjct: 58  -LREKTRRTAAQYIAAGIDPSVSTLYVQSHVPAHAQLAW--------VLSTITGYGEAAR 108

Query: 153 MLS-FESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGID 211
           M    +    +     S+    F Y +L A D +     +D  +   G DQ  ++    D
Sbjct: 109 MTQFKDKSAKQGAEATSVGL--FTYPVLMAADILL----FDADVVPVGDDQRQHVELTRD 162

Query: 212 LGERLKTPKLFALTS---PLLTTASGT----------KMGKTLS---GAIWLNKEMTSPY 255
           L ER  +   F  T      +    G           KM K+     G +WL   +  P 
Sbjct: 163 LAERFNSR--FGETFVVPQAMILKDGARIYDLQSPESKMSKSADSGAGIVWL---LDEPD 217

Query: 256 NFWQYWRN-IDDAD------------VVSFAKRLTTLPMSEIDRMA-KLQGKEINEAKKI 301
              +     + D D            V +     + L    I ++    +GK   + KK 
Sbjct: 218 IARKKIMRAVTDTDGVVSYDRAGKPGVSNLLSIYSALSGRAIQQIELDYEGKGYGDFKKG 277

Query: 302 I 302
           +
Sbjct: 278 L 278


>gi|224081816|ref|XP_002197331.1| PREDICTED: tyrosyl-tRNA synthetase [Taeniopygia guttata]
          Length = 527

 Score = 53.3 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 43/235 (18%), Positives = 70/235 (29%), Gaps = 23/235 (9%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            L  R    ++    +L  +  +  +  Y G   T    H  +   +  +    K G + 
Sbjct: 12  QLITRNL-QEVLGEEKLMAILQERELKIYWGTATTGKP-HVAYFVPMSKIADFLKAGCEV 69

Query: 71  ISLMGGGTSII---GDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
             L     + +     P    E R       I+  +E I       +K+  G        
Sbjct: 70  TILFADLHAYLDNMKAPWELLELRTRYYEHVIKAMLESIGVPLEK-LKFVRGTDYQ---- 124

Query: 128 NETWLCSIKYIDLLREIGSFFSV-NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
               L     +D+ R          +    E V+   + E  L      Y  LQA D   
Sbjct: 125 ----LSKEYTLDVYRLSSVVTQHDAKKAGAEVVK---QVEHPL-LSGLLYPGLQALDEEY 176

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
           L        Q GG DQ             L   K   L +P++   +G+KM  + 
Sbjct: 177 LK----VDAQFGGVDQRKIFTFAEKYLPSLGYAKRVHLMNPMVPGLTGSKMSSSE 227


>gi|308271597|emb|CBX28205.1| Tryptophanyl-tRNA synthetase [uncultured Desulfobacterium sp.]
          Length = 328

 Score = 53.3 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 51/294 (17%), Positives = 101/294 (34%), Gaps = 52/294 (17%)

Query: 41  GYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           G   T   LH G+L   LM    +Q+  +     +    ++  D         M+     
Sbjct: 10  GMRPTGP-LHLGNLHGALMNWIQMQEE-YDCFYFIADWHALTSDYENTS----MLAEYTK 63

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           +  I+ +    S        K+   + +        ++ +L   +     V  +    + 
Sbjct: 64  EMIIDWLSAGLS------PDKSTMFVQSQIK-----EHAELFLLLSMITPVPWLERNPTY 112

Query: 160 RSRLK--REQSLSFLEFN-YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL 216
           + ++     + LS   F  Y +LQA D + + K +   +   G DQ  ++    ++  R 
Sbjct: 113 KDQIIQLSNKDLSTFGFLGYPVLQAAD-IIMYKPFGVPV---GIDQVPHVEITREIARRF 168

Query: 217 K--------TPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYW-RNIDDA 267
                     P+     +P +      KM K+ + AI+L+    +P          I D 
Sbjct: 169 NFLYGQIFPEPEAILTKTPKILGFDRRKMSKSYNNAIFLS---DAPDAISSKVSLMITDP 225

Query: 268 --------------DVVSFAKRLTTLPM-SEIDRMAKLQGKEINEAKKIIATEI 306
                         +V  F K  T   + ++I+   ++ G    E KKI+A  +
Sbjct: 226 QRARKKDPGDPEVCNVFEFHKIYTDGSITADINAKCRIAGIGCVECKKIMAQNL 279


>gi|290958020|ref|YP_003489202.1| tryptophanyl-tRNA synthetase [Streptomyces scabiei 87.22]
 gi|260647546|emb|CBG70651.1| tryptophanyl-tRNA synthetase [Streptomyces scabiei 87.22]
          Length = 337

 Score = 53.3 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 51/307 (16%), Positives = 98/307 (31%), Gaps = 47/307 (15%)

Query: 31  CSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSI--IGDPSFRD 88
            +   +    G   TA S H G+    +  +   +  H    ++    +I    DP+   
Sbjct: 1   MASDRLRVLSGIQPTAGSFHLGNYLGAVRQWVALQESHDAFYMVVDLHAITIAQDPADLR 60

Query: 89  ESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFF 148
            + R+  +Q +   ++  +               A ++N  T       +   ++  +  
Sbjct: 61  ANTRLAVAQLLAAGLDPERCTLFVQSHVPEHAQLAWVMNCLTGFGEASRMTQFKDKSAKQ 120

Query: 149 SVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIIC 208
             +R                 S   F Y ILQ  D + L +  +  +   G DQ  +I  
Sbjct: 121 GADRA----------------SVGLFTYPILQVADIL-LYQANEVPV---GEDQRQHIEL 160

Query: 209 GIDLGERLKT--PKLFALTSPLLTTASGT---------KMGKTLSGAIWLNKEMTSPYNF 257
             DL ER      + F +  P +   +           KM K+ S    L   +  P   
Sbjct: 161 TRDLAERFNGRFGETFTIPKPYILKETAKIYDLQDPAIKMSKSASTPKGLINLLDDPKAT 220

Query: 258 WQYWRN-IDDAD-VVSF-----------AKRLTTLPMSEIDRMAKL-QGKEINEAKKIIA 303
            +  ++ + D D V+ +               +TL  + I  + +   GK     K  +A
Sbjct: 221 AKKVKSAVTDTDTVIRYDAAEKPGVSNLLSIYSTLTGAGIAELEQKYAGKGYGALKTDLA 280

Query: 304 TEITTMV 310
             +   V
Sbjct: 281 EVMVEFV 287


>gi|259416443|ref|ZP_05740363.1| pseudouridine synthase, Rsu [Silicibacter sp. TrichCH4B]
 gi|259347882|gb|EEW59659.1| pseudouridine synthase, Rsu [Silicibacter sp. TrichCH4B]
          Length = 410

 Score = 53.3 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 19/86 (22%), Positives = 34/86 (39%), Gaps = 5/86 (5%)

Query: 316 AEKAATAAMECFDMSIHSQH--MPTISISKDE--VSRGMGLLTLIVKAGFATSTNEARRH 371
           A +AA  A      S   +    P  S + D    + G  +  ++ +AG   S  EA R 
Sbjct: 24  AHRAAKGARPQAKPSAKPRDPKAPQASATGDARPSAEGDRIAKVLSRAG-VASRREAERM 82

Query: 372 LKSNAIKINNSIISNEKLQIKLQDFD 397
           +    + +N ++I +  L +   D  
Sbjct: 83  ITEGRVAVNGAVIDSPALNVTGSDRI 108


>gi|289616415|emb|CBI56942.1| unnamed protein product [Sordaria macrospora]
          Length = 407

 Score = 53.3 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 41/232 (17%), Positives = 83/232 (35%), Gaps = 31/232 (13%)

Query: 18  IHQISNPRELDILCSQGVV-TAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGG 76
           + ++ NP  ++ +  +G     Y G   T    H G+L   + +  L   G   I L+  
Sbjct: 36  LAEVLNPEIIEKVIDEGRAPRIYWGTATTGRP-HCGYLVPAIKIAQLLAAGCHVIVLLAD 94

Query: 77  GTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK---YGTGKTDALMLNNETWLC 133
             +++   + +         + +    +  +   ++ +K     T K + ++ ++     
Sbjct: 95  IHAVL--DNLKS------TVELVGYRAKYYERTITALLKAVGVPTDKLEFVLGSSYQ--- 143

Query: 134 SIKYIDLLREIGSFFSV-----NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             K  D + ++    ++      +    E V+        LS L   Y ILQ  D   L 
Sbjct: 144 --KSPDYIMDVYKLATLVSEHDAKKAGAEVVKQ--SDNAPLSGL--LYPILQVLDEEYLK 197

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
                  Q GG DQ        D   RL   +   + +P++    G+KM  +
Sbjct: 198 ----VDAQFGGVDQRKLFAAAKDWLPRLGYKERAHIMNPMVPGLQGSKMSSS 245


>gi|156089189|ref|XP_001612001.1| tRNA synthetases class I (W and Y) family protein [Babesia bovis]
 gi|154799255|gb|EDO08433.1| tRNA synthetases class I (W and Y) family protein [Babesia bovis]
          Length = 388

 Score = 53.3 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 42/260 (16%), Positives = 81/260 (31%), Gaps = 41/260 (15%)

Query: 40  IGYDLTASSLHAGHLTQLML-LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQE 98
            G   T   LH G+    +      Q  G       G    +I D     E         
Sbjct: 66  AGIQPTGD-LHIGNYIGCIKPAVEYQTAG-------GALNVLIADLHATTE------HNT 111

Query: 99  IQENIEKIKGIFSSFIKYG-TGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFE 157
                + I+   ++ +  G      A++L ++     I  +  +  + +  S+ R+    
Sbjct: 112 TVNLSDSIRRTVATLLSCGVDPDRSAIILQSD--FPEILELHWI--LSTVISIGRLRKLA 167

Query: 158 SVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK 217
           +   R   +   S  EF Y +L A D +           + G DQ  ++    ++ ++L 
Sbjct: 168 NFEHRQVAQDGDSVAEFLYPLLMAADVLC----SGSDSIIAGEDQLSHVCVIREVAKKLN 223

Query: 218 ---TPKLFALTSPLLTTA------SGT-KMGKTLSGAIWLNKEMTSPYNFWQYWR----N 263
                 +  +   L  T        G  KM K+   A        +    +Q  +    +
Sbjct: 224 RLAGSTVVCIPDMLPNTGFRVISLDGRGKMSKSSLQACSRINITDTEETIYQKIKVAKTS 283

Query: 264 IDD---ADVVSFAKRLTTLP 280
            DD    +V +  + L    
Sbjct: 284 TDDTSSTEVTNLRRLLKFFS 303


>gi|312876369|ref|ZP_07736354.1| tryptophanyl-tRNA synthetase [Caldicellulosiruptor lactoaceticus
           6A]
 gi|311796863|gb|EFR13207.1| tryptophanyl-tRNA synthetase [Caldicellulosiruptor lactoaceticus
           6A]
          Length = 325

 Score = 53.3 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 33/175 (18%), Positives = 63/175 (36%), Gaps = 31/175 (17%)

Query: 160 RSRLKREQSLSFLEFN-YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK- 217
           + R  +E++++   F  Y  LQA D +     Y   L   G DQ  ++    ++  R   
Sbjct: 112 QMRELKERNIATYGFLGYPCLQAADILI----YKAELVPVGEDQLPHLELTREIARRFNF 167

Query: 218 -------TPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRN-IDDA-- 267
                   P+    T  +L    G KM K+    I L++++    +  +   N I D   
Sbjct: 168 LYGQTFPEPQAILNTVKVLVGTDGRKMSKSYGNTIALSEDL---ESVRKKVMNMITDPAR 224

Query: 268 ------------DVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMV 310
                        V ++ +  +   +SE +   +       E KK +   I+  +
Sbjct: 225 IRKNDPGHPEVCTVFAYHQIFSPETVSETEEDCRQGKIGCVECKKRLFENISRFL 279


>gi|302833090|ref|XP_002948109.1| hypothetical protein VOLCADRAFT_80016 [Volvox carteri f.
           nagariensis]
 gi|300266911|gb|EFJ51097.1| hypothetical protein VOLCADRAFT_80016 [Volvox carteri f.
           nagariensis]
          Length = 403

 Score = 53.3 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 60/336 (17%), Positives = 109/336 (32%), Gaps = 53/336 (15%)

Query: 15  RGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      + +E+     +G     Y G   ++ +LH GHL   M   +LQ   + P+ +
Sbjct: 70  RGIFFAHRDLQEILDCYEKGIPFYLYTGRGPSSEALHLGHLVPFMFTKYLQDAFNVPLVI 129

Query: 74  -MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL 132
            +      +      DE+RR +  +  ++ I     +  +FI             N    
Sbjct: 130 QLTDDEKSLWRGLDIDEARR-LARENAKDIIACGFDVSKTFIFSDFEYVGGAFYRN---- 184

Query: 133 CSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA----YD-FVEL 187
                   +  I    ++N++           +E ++  + F    +QA     D F  +
Sbjct: 185 --------IIRIQRCVTMNQV--RGIFG--FTQEDNIGKIAF--PAVQAAPSFPDCFPHM 230

Query: 188 A---KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFAL---TSPLLTTASGTKMGKTL 241
               K+  C +     DQ        D+  R+   K   +     P L   SG KM  + 
Sbjct: 231 FGQRKDIRCLIPC-AIDQDPYFRMTRDVAPRIGHQKPALIESKFFPALQGESG-KMSASD 288

Query: 242 SG-AIWLN------KEMTSPYNFWQ----------YWRNIDDADVVSFAKRL--TTLPMS 282
           +  AI++N      K+  + Y F               N+       +          ++
Sbjct: 289 ANSAIFVNDTPSQIKDKINKYAFSGGGATVEEHRAKGANLAVDVPWKYLNFFLEDDAKLA 348

Query: 283 EIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEK 318
            I            E KK + T +T +V   E A  
Sbjct: 349 TIGEEYSSGRMLTGEIKKELITVLTDLVSRHERARA 384


>gi|66825257|ref|XP_645983.1| tryptophanyl-tRNA synthetase [Dictyostelium discoideum AX4]
 gi|74858824|sp|Q55DZ8|SYWC_DICDI RecName: Full=Tryptophanyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Tryptophan--tRNA ligase; Short=TrpRS
 gi|60474140|gb|EAL72077.1| tryptophanyl-tRNA synthetase [Dictyostelium discoideum AX4]
          Length = 400

 Score = 52.9 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 56/339 (16%), Positives = 116/339 (34%), Gaps = 56/339 (16%)

Query: 15  RGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      + +E LD   S      Y G   ++ SLH GHL       +LQ   + P+ +
Sbjct: 65  RGIFFSHRDLKEILDHHESGKKWFLYTGRGPSSGSLHFGHLLPFTFTKYLQDAFNVPLVV 124

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                         ++ + + +   ++E+I+         I  G       + +N  ++ 
Sbjct: 125 -----------QMTNDEKFLWKDMTLEESIKFTHNNVKDIIALGFDIQKTFIFSNLEYIH 173

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY-----DFVELA 188
            + Y ++L+ I    ++N++ +    +      +S +  +F +  +QA       F  + 
Sbjct: 174 HL-YPNVLK-IARCVNLNQIQNIFGFK------ESDAIGKFTFPPVQAAPCFPDSFPHIF 225

Query: 189 -------KNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKL--FALTSPLLTTASGTKMG 238
                  KN  C +     DQ        D+  R+         +   P L   + TKM 
Sbjct: 226 PLNDPEIKNIRCLIPC-AIDQDPYFRMTRDIAHRIGHQKPALIHSKFFPALQGHN-TKMS 283

Query: 239 KTLSG-AIWLNKEMTSPYNFWQYW-------------RNIDDADVVSFAKRLTTL----- 279
            + +  A++L+       +  +               +N  D  V    + LT +     
Sbjct: 284 ASDTNSAVYLSDTPDQVKDKIKKHAFSGGGATKEEQEKNGADLSVDITYEYLTFMLEDDE 343

Query: 280 PMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEK 318
            + +I            E K+I+   +  ++   +EA  
Sbjct: 344 QLKDIAHRYSTGKMMTGEIKQILIDLMNKIIIRHKEARA 382


>gi|169831362|ref|YP_001717344.1| tryptophanyl-tRNA synthetase [Candidatus Desulforudis audaxviator
           MP104C]
 gi|169638206|gb|ACA59712.1| tryptophanyl-tRNA synthetase [Candidatus Desulforudis audaxviator
           MP104C]
          Length = 327

 Score = 52.9 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 41/229 (17%), Positives = 74/229 (32%), Gaps = 42/229 (18%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGG---TSIIGDPSFRDESRRMMRSQ 97
           G   +   LH GHL+ L     LQ+        +      T+   DP    E+ R M + 
Sbjct: 9   GMRPSGR-LHIGHLSVLSNWLRLQEEN-DCFFFVADWHALTTAFDDPGSIGENTREMLAD 66

Query: 98  EIQENIEKIKGIF---SSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRML 154
            +   I+  +      S  +++        M+   +WL  +                   
Sbjct: 67  WLAVGIDPERSTVFVQSRLLEHAELHLLLSMITPLSWLERVPTY---------------- 110

Query: 155 SFESVRSRLKREQSLSFLEFN-YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLG 213
             + V+    R + ++   F  Y +LQ  D + + +     +   G DQ  ++    ++ 
Sbjct: 111 -KDQVQQLAARGKDITTYGFLGYPLLQTADIL-MYRADAVPV---GQDQLPHLELSREVA 165

Query: 214 ERLKTPKLFALTSP----------LLTTASGTKMGKTLSGAIWLNKEMT 252
            R     L+    P          LL    G KM K+    I L+    
Sbjct: 166 RRFN--HLYGNVFPEPQALLAKESLLPGVDGRKMSKSYENEISLSASPD 212


>gi|171693919|ref|XP_001911884.1| hypothetical protein [Podospora anserina S mat+]
 gi|170946908|emb|CAP73712.1| unnamed protein product [Podospora anserina S mat+]
          Length = 487

 Score = 52.9 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 53/307 (17%), Positives = 94/307 (30%), Gaps = 52/307 (16%)

Query: 15  RGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG +    +    LD          Y G   ++ S+H GH T  M   WLQ T   P+ +
Sbjct: 85  RGIVFSHRDFELILDRYERNEPFFLYTGRGPSSDSIHVGHCTPFMFTKWLQDTFDVPLVI 144

Query: 74  MGGGTSIIGDPSF-RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL 132
           M     +  D  +   E R       I+E            I  G       + ++  ++
Sbjct: 145 M-----LTDDEKYLFSEKR------TIEEVQGYCDSNIRDIISMGFDPNKTFIFSDYDYV 193

Query: 133 CSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQS-LSFLEFNYMILQAYDFVELAKNY 191
               Y  + R +    ++N+  +              + F         A  F  +    
Sbjct: 194 GGAFYRQITR-LAKHITLNQ--ARAIFGFNDSSNIGKIHFGSIQGAAAFANSFPHIFGED 250

Query: 192 D-------CRLQMGGSDQWGNIICGIDL--------GERLKTPKLFALTSPLLTTASGTK 236
           +       C +     DQ        D+            K   + +L  P L    GTK
Sbjct: 251 EKKTVGIPCLIPC-AVDQDPYFRATRDVAARLTYQGVRFAKPSLIHSLFLPALQGP-GTK 308

Query: 237 MGKTL-SGAIWLN------KEMTSPYNFWQYWRNID-------DADV---VSFAKRLTTL 279
           M  ++ S AI++       K   + Y F     +++       D DV     + +     
Sbjct: 309 MSASIDSSAIFMTDTPNQIKNKVNKYAFSGGKVSVEEHRAVGGDTDVDVAYQYLRFF-LE 367

Query: 280 PMSEIDR 286
              E+++
Sbjct: 368 DDEELEK 374


>gi|326530374|dbj|BAJ97613.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 419

 Score = 52.9 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 56/336 (16%), Positives = 95/336 (28%), Gaps = 49/336 (14%)

Query: 15  RGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +  ++  L  QG     Y G   ++ SLH GHL   M   +LQ     P+ +
Sbjct: 76  RGIFFAHRDLNQILDLYEQGEKFYLYTGRGPSSESLHLGHLVPFMFTKYLQDAFKVPVVI 135

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                             + +  +  ++ I     I  +FI             N     
Sbjct: 136 QLTDDEKFLWKDLSIAESKRLARENAKDIIACGFDIERTFIFSDFEYVGGPFYEN----- 190

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE------- 186
                  + ++    + N +    +       E  +    F   +  A  F         
Sbjct: 191 -------MMQVAKRVTFNTL--RGTFG--FTPEDHIGKCCFP-PVQAAPSFASSFPHLFG 238

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFAL---TSPLLTTASGTKMGKTLSG 243
           +     C +     DQ        D+  ++  PK   +     P L    G KM  +   
Sbjct: 239 VNDQLRCLIPC-AIDQDPYFRLTRDVAPKIGYPKPSLIESKFFPALQGEIG-KMSASDPN 296

Query: 244 -AIWLN------KEMTSPYNFWQ----------YWRNIDDADVVSFAKRLTTLPMSEIDR 286
            AI+L       KE    Y F            Y  N+D    + +      L       
Sbjct: 297 TAIYLTDKPKVIKEKIRKYAFSGGQSTTELQRKYGANLDVDVCIKYLNF--FLEDDAEFE 354

Query: 287 MAKLQGKEINEAKKIIATEITTMVHGREEAEKAATA 322
             K + K  N     +   +T ++     A + A A
Sbjct: 355 HIKKEYKAGNMLTGKLKDHVTDILSKIALAHQNARA 390


>gi|298528982|ref|ZP_07016385.1| tryptophanyl-tRNA synthetase [Desulfonatronospira thiodismutans
           ASO3-1]
 gi|298510418|gb|EFI34321.1| tryptophanyl-tRNA synthetase [Desulfonatronospira thiodismutans
           ASO3-1]
          Length = 332

 Score = 52.9 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 42/292 (14%), Positives = 93/292 (31%), Gaps = 56/292 (19%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   T   LH GH   ++  +   +  +     +    ++  + +   + +  + ++ ++
Sbjct: 12  GMRPTGP-LHLGHYFGVLQNWVDFQENYTCYYFVADWHALTSEYAEPRKIKPFV-AELVK 69

Query: 101 ENI-------EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRM 153
           + I       + +    S   ++        M+    WL        +R+         +
Sbjct: 70  DWIASGLDPEKCVLFQQSLIKEHAELNLLLSMITPLGWLERNPTYKEIRQ--------EL 121

Query: 154 LSFESVRSRLKREQSLSFLEFN-YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL 212
           ++ +           L+   F  Y +LQA D + + +     +   G DQ  ++    ++
Sbjct: 122 INKD-----------LNTHGFLGYPVLQAADIL-IYRPDFVPV---GHDQLPHLELTREI 166

Query: 213 GERLKT-------PKLFALTSPL-LTTASGTKMGKTLSGAIWLNKEMT--SPYNFWQYWR 262
             R               LT    L    G KM K+    I+L +EM    P        
Sbjct: 167 ARRFNHLYGDFLPEPQAKLTESAKLPGLDGRKMSKSYGNCIYLGEEMETIRPKVM-SMLT 225

Query: 263 NID--------DADVVS---FAKRLT-TLPMSEIDRMAKLQGKEINEAKKII 302
           +          D +V +   + + +T      EI            + KK++
Sbjct: 226 DTSRMRKADPGDPEVCNLYPYHRLMTPEETCREIRENCTQAKWGCVDCKKLL 277


>gi|52345886|ref|NP_001004987.1| tyrosyl-tRNA synthetase, cytoplasmic [Xenopus (Silurana)
           tropicalis]
 gi|82183394|sp|Q6DIJ1|SYYC_XENTR RecName: Full=Tyrosyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Tyrosyl--tRNA ligase; Short=TyrRS
 gi|49522618|gb|AAH75547.1| tyrosyl-tRNA synthetase [Xenopus (Silurana) tropicalis]
          Length = 528

 Score = 52.9 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 42/235 (17%), Positives = 70/235 (29%), Gaps = 23/235 (9%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            L  R    ++    ++  +  +  +  Y G   T    H  +   +  +    K G + 
Sbjct: 12  QLITRNL-QEVLGEDKMKEILKERPLRIYWGTATTGKP-HVAYFVPMSKIADFLKAGCEV 69

Query: 71  ISLMGGGTSII---GDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
             L     + +     P    E R     Q IQ  ++ I       +++  G        
Sbjct: 70  TILFADLHAYLDNMKAPWDLLELRTRYYEQVIQAMLQSIGVPLER-LRFIRGTEFQ---- 124

Query: 128 NETWLCSIKYIDLLREIGSFFSV-NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
               L     +D+ R          +    E V+   + E  L      Y  LQA D   
Sbjct: 125 ----LSKEYTLDVYRLSSVVTQHDAKKAGAEVVK---QVEHPL-LSGLLYPGLQALDEEY 176

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
           L        Q GG DQ             L   K   L +P++   +G KM  + 
Sbjct: 177 LK----VDAQFGGVDQRKIFTFAEKYLPALGYAKRIHLMNPMVPGLTGAKMSSSE 227


>gi|260893161|ref|YP_003239258.1| tryptophanyl-tRNA synthetase [Ammonifex degensii KC4]
 gi|260865302|gb|ACX52408.1| tryptophanyl-tRNA synthetase [Ammonifex degensii KC4]
          Length = 324

 Score = 52.9 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 38/226 (16%), Positives = 65/226 (28%), Gaps = 42/226 (18%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTS-IIGDPSFRDESRRMMRSQEI 99
           G   T   LH GHL  L     LQK  H+    +    +      + R    +      +
Sbjct: 6   GMRPTG-YLHLGHLCVLENWLELQKE-HECFFFVADWHALTTEYENPRSI--KEYTYAMV 61

Query: 100 QENI-------EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNR 152
            + +       + +  + S    +        M    +WL  +                 
Sbjct: 62  ADWLAVGLDPEKSVIFVQSQVPAHAELHLIFSMFTPLSWLERVPTY-------------- 107

Query: 153 MLSFESVRSRLKREQSLSFLEFN-YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGID 211
               + VR      + ++   F  Y +LQA D + +       +   G DQ  +I    +
Sbjct: 108 ---KDQVRKLKALGKDITTYGFLGYPLLQAADIL-IYLAEGVPV---GEDQLPHIELCRE 160

Query: 212 LGERLK-------TPKLFALT-SPLLTTASGTKMGKTLSGAIWLNK 249
           +  R               L    L+    G KM K+    I L  
Sbjct: 161 IARRFNYLYAPIFPEPQGILAEVKLVPGIDGQKMSKSYRNVIPLTA 206


>gi|281354796|ref|ZP_06241290.1| tryptophanyl-tRNA synthetase [Victivallis vadensis ATCC BAA-548]
 gi|281317676|gb|EFB01696.1| tryptophanyl-tRNA synthetase [Victivallis vadensis ATCC BAA-548]
          Length = 320

 Score = 52.9 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 45/287 (15%), Positives = 87/287 (30%), Gaps = 51/287 (17%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   + +  H G+    M      +   +    +    S+   P         +R   ++
Sbjct: 6   GIQPSGTP-HIGNYFGAMRQIINIQDKGETFIFLADYHSLTTAPEP-----EQLRKNVLE 59

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETW-LCSIKYIDLLREIGSFFSVNRMLSFESV 159
             +  +             ++D   +   TW L ++  + LL    S+         + +
Sbjct: 60  LTLNYLSCGVDPEKAILFRQSDVPQVCELTWILNNVTPVGLLERAHSY--------KDKI 111

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
                    L    F+Y +L A D +     Y   L   G DQ  ++    D+  +    
Sbjct: 112 AKGFAPNNGL----FSYPVLMASDILI----YQSNLVPVGKDQKQHLEITRDIAIKFNNQ 163

Query: 220 KLFALTSP---------LLTTASGTKMGKTLSGAIWL-NKEMTSPYNFWQYWRNI----- 264
                T P         ++    G KM K+ +  I +  KE        +   N+     
Sbjct: 164 YGEVFTIPEELIPEEVAIVPGTDGQKMSKSYNNTIPIFGKEK----EIKKAIMNVVTDCK 219

Query: 265 -------DDA-DVVSFAKRL-TTLPMSEIDRMAKLQGKEINEAKKII 302
                   D  +VV+  K + T   + E+    +  G     AK  +
Sbjct: 220 ALEEPKDPDNCNVVALYKLVATPEELEEMKARYRAGGYGYGHAKLAL 266


>gi|325128568|gb|EGC51441.1| tryptophanyl-tRNA synthetase [Neisseria meningitidis N1568]
          Length = 336

 Score = 52.9 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 40/218 (18%), Positives = 62/218 (28%), Gaps = 49/218 (22%)

Query: 174 FNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSP------ 227
           F+Y IL   D +    N +  +   G DQ  ++    D+  R         T P      
Sbjct: 136 FSYPILMTADILMFNAN-EVPV---GRDQIQHVEMARDIAGRFNHRFQELFTLPEVKIDE 191

Query: 228 ---LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWR---------NIDDAD-VVSFAK 274
              LL    G KM K+    I L +                         D   +    K
Sbjct: 192 NVELLVGLDGRKMSKSYGNTIPLWENDKKTQKSVNKIITNMKEPGEPKQPDESPLFEIYK 251

Query: 275 RLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQ 334
             +T   +        +G    EAKK++A +I        E  +      E    +    
Sbjct: 252 AFSTPSETAAFTQMLAEGLAWGEAKKLLAAKINA------ELAEPRERYNEL---TADPS 302

Query: 335 HMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHL 372
            +  I                 ++AG   +  EAR  L
Sbjct: 303 QIEEI-----------------LQAGAQKARKEARELL 323


>gi|146328729|ref|YP_001209159.1| tryptophanyl-tRNA synthetase [Dichelobacter nodosus VCS1703A]
 gi|146232199|gb|ABQ13177.1| tryptophanyl-tRNA synthetase [Dichelobacter nodosus VCS1703A]
          Length = 333

 Score = 52.9 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 25/154 (16%), Positives = 47/154 (30%), Gaps = 23/154 (14%)

Query: 168 SLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSP 227
            +S   F Y +L + D +     +       G DQ  ++    D+  R           P
Sbjct: 128 GISMGLFCYPVLMSADILM----FGATHVPVGRDQIQHLEMARDIAARFNHRYQPLFVLP 183

Query: 228 ---------LLTTASGTKMGKTLSGAIWL--NKEMTSPYNFWQYWRNID--------DAD 268
                    LLT   G KM K+    I L  +++            ++         D+ 
Sbjct: 184 EAVVDDNVALLTGTDGRKMSKSYGNTIALFDDEKALRKQIMKIVTNSLPPEAPKDPDDSV 243

Query: 269 VVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKII 302
           + +  +         + R     G    +AK+ +
Sbjct: 244 IFAMYRAFADETAVAVMRQRFQDGIGWGDAKQAL 277


>gi|225155932|ref|ZP_03724416.1| Tryptophan--tRNA ligase [Opitutaceae bacterium TAV2]
 gi|224803285|gb|EEG21524.1| Tryptophan--tRNA ligase [Opitutaceae bacterium TAV2]
          Length = 321

 Score = 52.9 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 48/308 (15%), Positives = 93/308 (30%), Gaps = 52/308 (16%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   +   LH G+    +      +        +    S+        E+RR        
Sbjct: 6   GIQPSGQ-LHIGNYFGAIKPAVELQARGDCTYFIANYHSMTSLTD--AEARRGNTLDVAL 62

Query: 101 ENIEK-IKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           + I   +  + S+F +         ++    W+           IG+   V  +    S 
Sbjct: 63  DWIACGLDPVKSTFFRQSDVPEVCELM----WI-----------IGTHTPVGLLERAHSY 107

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
           + +L +  + +F  F Y +L A D +     YD  +   G DQ  ++    D+  +    
Sbjct: 108 KDKLAKGIAPNFGLFAYPVLMAADILL----YDTNIVPVGRDQKQHVEMTRDIAIKFNHT 163

Query: 220 KLFALTSP---------LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNI------ 264
                  P         ++    G KM K+    +       +     +   +I      
Sbjct: 164 YGDTFVVPEPEIRDETAIVPGLDGQKMSKSYGNTL---PIFGAEKETRKKIMSIVMDSRT 220

Query: 265 -----DDADVVSFAKRLTTLPMSEI----DRMAKLQGKEINEAKKIIATEITTMV--HGR 313
                 DAD     + L  +  + I    ++  +  G    + KK +     T    +  
Sbjct: 221 PAEPKPDADQNIAIQLLKLVAPAAIAADTEQRLRAGGLGYGDLKKTLFEHYWTHFAAYRE 280

Query: 314 EEAEKAAT 321
             AE AA 
Sbjct: 281 RRAELAAN 288


>gi|149694717|ref|XP_001499856.1| PREDICTED: similar to Tyrosyl-tRNA synthetase, cytoplasmic
           (Tyrosyl--tRNA ligase) (TyrRS) [Equus caballus]
          Length = 535

 Score = 52.9 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 41/228 (17%), Positives = 71/228 (31%), Gaps = 22/228 (9%)

Query: 18  IHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGG 77
           + ++   ++L  +  +  +  Y G   T    H  +   +  +    K G +   L    
Sbjct: 25  LQEVLGEQKLKEILKERELKVYWGTATTGKP-HVAYFVPMSKIADFLKAGCEVTILFADL 83

Query: 78  TSII---GDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCS 134
            + +     P    E R       I+  +E I       +K+  G            L  
Sbjct: 84  HAYLDNMKAPWELLELRASYYENVIKAMLESIGVPLEK-LKFVKGTDYQ--------LSK 134

Query: 135 IKYIDLLREIGSFFSV-NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDC 193
              +D+ R          +    E V+   + E  L      Y  LQA D   L  +   
Sbjct: 135 EYTLDVYRLSSLVTQHDAKKAGAEVVK---QVEHPL-LSGLLYPGLQALDEEYLKADA-- 188

Query: 194 RLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
             Q GG DQ             L   K   L +P++   +G+KM  + 
Sbjct: 189 --QFGGVDQRKIFTFAEKYLPALGYSKRVHLMNPMVPGLTGSKMSSSE 234


>gi|28493653|ref|NP_787814.1| tryptophanyl-tRNA synthetase [Tropheryma whipplei str. Twist]
 gi|39932164|sp|Q83FN1|SYW_TROWT RecName: Full=Tryptophanyl-tRNA synthetase; AltName:
           Full=Tryptophan--tRNA ligase; Short=TrpRS
 gi|28476695|gb|AAO44783.1| tryptophanyl-tRNA synthetase [Tropheryma whipplei str. Twist]
          Length = 335

 Score = 52.9 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 45/259 (17%), Positives = 89/259 (34%), Gaps = 40/259 (15%)

Query: 31  CSQGVVTAYIGYDLTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSIIGDPSFRDE 89
            ++  V    G   ++  LH G+    +  F  +Q   +    ++    S+        +
Sbjct: 8   INKKPVVL-SGIQPSSGMLHLGNYLGALKSFGRMQD-DYTTYFMLANLHSMT-----FPQ 60

Query: 90  SRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFS 149
           +  ++R   I+   + I             ++D    N   W        +L  +  F  
Sbjct: 61  NPEVLRENTIRIAAQCIAAGIDPAKSIVFLQSDVYQHNQLAW--------VLGNVCIFGE 112

Query: 150 VNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICG 209
             RM      + +  ++ ++S   F Y IL A D +     YD      G+DQ  ++   
Sbjct: 113 AARMTQ---FKDKSGKQGNISTGLFTYPILMASDILL----YDSAFVPVGADQKQHLELT 165

Query: 210 IDLGE----RLKT----PKLFALTSPLLTTAS-GTKMGKT---LSGAIWLNKEMTSPYNF 257
             L      +       P+ F  +  +        KM K+    SG I+L   + SP   
Sbjct: 166 RTLARRFNAQYGQTFLVPQPFECSIRIYDLQDPAVKMSKSSATESGTIFL---LDSPDKI 222

Query: 258 WQYWR-NIDD-ADVVSFAK 274
            +    ++ D  DV+ + +
Sbjct: 223 VKKIMRSVTDSEDVIGYDR 241


>gi|281210530|gb|EFA84696.1| tryptophanyl-tRNA synthetase [Polysphondylium pallidum PN500]
          Length = 418

 Score = 52.9 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 46/254 (18%), Positives = 89/254 (35%), Gaps = 38/254 (14%)

Query: 15  RGFIHQISNP-RELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +    LD   S      Y G   ++ SLH GHL   +   +LQ   + P+ +
Sbjct: 76  RGIFFSHRDLVEILDAYESGKPFYLYTGRGPSSGSLHFGHLVPFIFTKYLQDVFNVPLVI 135

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                         ++ + + +   ++E+I+         I  G       + +N  ++ 
Sbjct: 136 -----------QMTNDEKFLWKDITLEESIQFTINNVKDIIALGFDIEKTFIFSNLDYVG 184

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY-----DFVELA 188
           ++     + +IG   ++N+      ++     + S S  +F +  +QA       F  + 
Sbjct: 185 TMYPN--IVKIGKCITLNQ------IKGIFGFDDSNSCGKFAFPPVQAAPALPDSFPHIF 236

Query: 189 KNYD-------CRLQMGGSDQWGNIICGIDL---GERLKTPKLFALTSPLLTTASGTKMG 238
              D       C +     DQ        D+      LK   + +   P L   + TKM 
Sbjct: 237 SPSDPMTKSIRCLIPC-AIDQDPYFRMTRDVAPRIGYLKPSLIHSKFFPALQGHN-TKMS 294

Query: 239 KTLSG-AIWLNKEM 251
            + S  AI+L+   
Sbjct: 295 ASDSNSAIYLSDTP 308


>gi|116327459|ref|YP_797179.1| tryptophanyl-tRNA synthetase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116331927|ref|YP_801645.1| tryptophanyl-tRNA synthetase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
 gi|116120203|gb|ABJ78246.1| Tryptophan--tRNA ligase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116125616|gb|ABJ76887.1| Tryptophan--tRNA ligase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
          Length = 322

 Score = 52.9 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 35/226 (15%), Positives = 69/226 (30%), Gaps = 41/226 (18%)

Query: 41  GYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           G   +   LH G+    +  L   Q +       +    S+    S   E ++      +
Sbjct: 6   GVQPSGK-LHLGNFFSVIRKLKEYQDS-ADLFCFIADLHSLTTFSS--KEKQKENTFNAV 61

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRM----LS 155
            + +              +G  +   L   TW            +    +VN++      
Sbjct: 62  CDFLALGIDPDRCTFWLQSGVPEVTEL---TWY-----------LSHSITVNQLNLAHSY 107

Query: 156 FESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER 215
            + V         L    F Y +L A D +    +   ++ +G  DQ  ++    D+   
Sbjct: 108 KDKVAKGFNPGGGL----FFYPVLMAADILGFDSD---QVPVG-KDQKQHLEFARDIASN 159

Query: 216 LKTP--KLFAL-------TSPLLTTASGTKMGKTLSGAI-WLNKEM 251
                  +F +       T+ L+    G KM K+    I + + E 
Sbjct: 160 FNREIGPVFKVPEPEIDETTALVPGTDGQKMSKSYGNTINFFDSEK 205


>gi|57530465|ref|NP_001006314.1| tyrosyl-tRNA synthetase, cytoplasmic [Gallus gallus]
 gi|82081403|sp|Q5ZJ08|SYYC_CHICK RecName: Full=Tyrosyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Tyrosyl--tRNA ligase; Short=TyrRS
 gi|53133917|emb|CAG32285.1| hypothetical protein RCJMB04_21p3 [Gallus gallus]
          Length = 527

 Score = 52.5 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 44/235 (18%), Positives = 70/235 (29%), Gaps = 23/235 (9%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            L  R    ++    +L  +  +  V  Y G   T    H  +   +  +    K G + 
Sbjct: 12  QLITRNL-QEVLGEDKLMAILKEREVKIYWGTATTGKP-HVAYFVPMSKIADFLKAGCEV 69

Query: 71  ISLMGGGTSII---GDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
             L     + +     P    E R       I+  +E I       +K+  G        
Sbjct: 70  TILFADLHAYLDNMKAPWELLELRTRYYEHVIKAMLESIGVPLEK-LKFIRGTDYQ---- 124

Query: 128 NETWLCSIKYIDLLREIGSFFSV-NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
               L     +D+ R          +    E V+   + E  L      Y  LQA D   
Sbjct: 125 ----LSKEYTLDVYRLSSVVTQHDAKKAGAEVVK---QVEHPL-LSGLLYPGLQALDEEY 176

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
           L        Q GG DQ             L   K   L +P++   +G+KM  + 
Sbjct: 177 LK----VDAQFGGVDQRKIFTFAEKYLPSLGYAKRIHLMNPMVPGLTGSKMSSSE 227


>gi|257454491|ref|ZP_05619750.1| tryptophan--tRNA ligase [Enhydrobacter aerosaccus SK60]
 gi|257448111|gb|EEV23095.1| tryptophan--tRNA ligase [Enhydrobacter aerosaccus SK60]
          Length = 363

 Score = 52.5 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 23/93 (24%), Positives = 35/93 (37%), Gaps = 17/93 (18%)

Query: 168 SLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK------TPKL 221
            +S   F+Y +L A D +     +   + +G  DQ  +I    D+              +
Sbjct: 139 GISMGLFSYPVLMAADILMFNATH---VPVG-KDQIQHIEMARDIAGTFNFRYCDPEKPI 194

Query: 222 FALT-------SPLLTTASGTKMGKTLSGAIWL 247
           F L        +PLLT   G KM K+    I L
Sbjct: 195 FVLPEAMVDDDTPLLTGLDGRKMSKSYGNTIPL 227


>gi|331699050|ref|YP_004335289.1| tryptophanyl-tRNA synthetase [Pseudonocardia dioxanivorans CB1190]
 gi|326953739|gb|AEA27436.1| tryptophanyl-tRNA synthetase [Pseudonocardia dioxanivorans CB1190]
          Length = 341

 Score = 52.5 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 52/299 (17%), Positives = 98/299 (32%), Gaps = 53/299 (17%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   T+ S H G+    +  +   +  H     +    +I  D   +  + R   +    
Sbjct: 15  GIQPTSDSFHLGNYLGAVRQWVALQDEHDAFYFVPDLHAITVDHDPKTLAARTRNAAAQL 74

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLS-FESV 159
             +       + F++    +          W        +L  I  F   +RM    +  
Sbjct: 75  LALGLDPDKCTLFVQSHVPEHAQ-----LAW--------VLSCITGFGEASRMTQFKDKS 121

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             +     ++    F Y IL A D + L +     +   G DQ  ++    DL +R  T 
Sbjct: 122 AKQGADRTTVGL--FTYPILMAADVL-LYQADQVPV---GEDQRQHLELTRDLAQRFNTR 175

Query: 220 KLFALTSP-----LLTTAS--------GTKMGKTLSGAIWLNKEMTSPYNFWQYWRN-ID 265
             F  T       +LT A+          KM K+ S    + + +  P    +  R+ + 
Sbjct: 176 --FGTTFVVPEPYILTGAAKIQDLQDPAIKMSKSASTPSGIIELLDDPKVSAKKIRSAVT 233

Query: 266 DAD---------------VVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTM 309
           DA+               +++    LT   +SE++      GK   + KK +A  +   
Sbjct: 234 DAEREIRFDTAAKPGISNLLTIYSALTDRKVSELEADYA--GKGYGDLKKDLAEVVADF 290


>gi|294673313|ref|YP_003573929.1| tryptophan--tRNA ligase [Prevotella ruminicola 23]
 gi|294474118|gb|ADE83507.1| tryptophan--tRNA ligase [Prevotella ruminicola 23]
          Length = 362

 Score = 52.5 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 42/238 (17%), Positives = 73/238 (30%), Gaps = 38/238 (15%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGH----KPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
            T   LH GH    +    +Q        +    M    ++  +    ++ R+ +    +
Sbjct: 11  PTGK-LHLGHYVGSLR-RRVQLQNQGDFDRMFVFMADVQALTDNADNPEKIRQNIIEVAL 68

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNR-MLSFES 158
                 +             K    + +    L  +     L  + S   V R       
Sbjct: 69  DYLAAGL----------DPEKCTLFIQSQIPELAELTT--YLMNLVSVSRVQRNPTVKTE 116

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
           V+ R    +S+    F Y + QA D + L K         G DQ   +    +L  R   
Sbjct: 117 VKMRGFEGESIPLGFFCYPVSQAAD-ITLFKATTVP---AGEDQEPMLEVTRELVRRFNQ 172

Query: 219 --PKLFA---------LTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNI 264
               +           LT+  L    G  KM K+L   I+L+       + WQ  R++
Sbjct: 173 IYAPVLVEPNIMLPENLTARRLPGTDGKEKMSKSLGNCIYLSDTA---EDVWQKVRSM 227


>gi|296128865|ref|YP_003636115.1| tryptophanyl-tRNA synthetase [Cellulomonas flavigena DSM 20109]
 gi|296020680|gb|ADG73916.1| tryptophanyl-tRNA synthetase [Cellulomonas flavigena DSM 20109]
          Length = 351

 Score = 52.5 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 46/296 (15%), Positives = 93/296 (31%), Gaps = 44/296 (14%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   T+ SL  G+    +  +   +  H  I  +    ++   P  +     ++R +  +
Sbjct: 23  GMQPTSDSLQLGNYLGALTQWVALQDTHDAIYCVVDLHALTVGPDPK-----VLRERTRR 77

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
              + +             ++         W+  +  +    E G         +     
Sbjct: 78  TAAQYLAAGVDPARSILFVQSHVPEHAELAWI--LSCLTGFGEAGRMTQFKDKSAK---- 131

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT-- 218
              +     +   F Y +L A D +     YD  L   G DQ  ++    DL +RL +  
Sbjct: 132 ---QGSDGTTVGLFTYPVLMAADILL----YDTALVPVGEDQRQHLELSRDLAQRLNSRF 184

Query: 219 -------PKLFAL--TSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRN-IDDA 267
                  P+ + +  T+ +      T KM K+      L + +  P    +  R+ + DA
Sbjct: 185 GPGTVVVPEPYIVSATAKIYDLQDPTSKMSKSAESPNGLIELLDDPKVVAKRIRSAVTDA 244

Query: 268 D------------VVSFAKRLTTLPMSEIDRMAKL-QGKEINEAKKIIATEITTMV 310
           +            V +       L    I  +     GK   + KK +A  +   +
Sbjct: 245 EREIRYDPAAKPGVSNLLTIFAALSGRSIPSLESDYAGKGYGDLKKDLADVVVDFL 300


>gi|326693118|ref|ZP_08230123.1| tryptophanyl-tRNA synthetase II [Leuconostoc argentinum KCTC 3773]
          Length = 338

 Score = 52.5 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 35/225 (15%), Positives = 70/225 (31%), Gaps = 33/225 (14%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     +Q +G ++P  ++    +   +    ++ R+ +    +  
Sbjct: 12  PTGK-LHIGHYIGSLKNRVAMQNSGEYEPFVMIADTQAFTDNARNPEKIRQSLTEVALDY 70

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIG-SFFSVNRMLSFESVR 160
               I             KT   + +    L  +     +  +  +    N  +  E  +
Sbjct: 71  LAVGI----------DPTKTTIFVQSQIKGLFELTEY-FMNLVSVARLQRNPTVKAEISQ 119

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
                     FL   Y + QA D + + +     +   G DQ   +    +L        
Sbjct: 120 KGFGEGIPAGFL--TYPVSQAAD-IAIFRATKVPV---GDDQEPMLEQARELVRSFNNAY 173

Query: 221 LF-ALTSPL----------LTTASGT-KMGKTLSGAIWLNKEMTS 253
               L  P+          L    G  KM K+L   I+++ E  +
Sbjct: 174 QSDVLVEPVGVFPPKGQGRLPGIDGNAKMSKSLGNGIYISDEADT 218


>gi|312794088|ref|YP_004027011.1| tryptophanyl-tRNA synthetase [Caldicellulosiruptor kristjanssonii
           177R1B]
 gi|312181228|gb|ADQ41398.1| tryptophanyl-tRNA synthetase [Caldicellulosiruptor kristjanssonii
           177R1B]
          Length = 325

 Score = 52.5 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 32/175 (18%), Positives = 63/175 (36%), Gaps = 31/175 (17%)

Query: 160 RSRLKREQSLSFLEFN-YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK- 217
           + R  +E++++   F  Y  LQA D +     Y   L   G DQ  ++    ++  R   
Sbjct: 112 QMRELKERNIATYGFLGYPCLQAADILI----YKAELVPVGEDQLPHLELTREIARRFNF 167

Query: 218 -------TPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRN-IDDA-- 267
                   P+    T  +L    G KM K+    I L++++    +  +   N + D   
Sbjct: 168 LYGQTFPEPQAILNTVKVLVGTDGRKMSKSYGNTIALSEDL---ESVRKKVMNMVTDPAR 224

Query: 268 ------------DVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMV 310
                        V ++ +  +   +SE +   +       E KK +   I+  +
Sbjct: 225 IRKNDPGHPEVCTVFAYHQIFSPETVSETEEDCRQGKIGCVECKKRLFENISRFL 279


>gi|126735086|ref|ZP_01750832.1| RNA pseudouridylate synthase family protein [Roseobacter sp. CCS2]
 gi|126715641|gb|EBA12506.1| RNA pseudouridylate synthase family protein [Roseobacter sp. CCS2]
          Length = 267

 Score = 52.5 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 13/57 (22%), Positives = 26/57 (45%), Gaps = 1/57 (1%)

Query: 341 ISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
           +S +    G  +  ++ +AG A S  EA R ++   + +N   I++  L +   D  
Sbjct: 1   MSNETPPPGDRIAKVLSRAGIA-SRREAERMIEDGRVSVNGKTITSPALNVTADDRI 56


>gi|326505538|dbj|BAJ95440.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 419

 Score = 52.5 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 56/336 (16%), Positives = 96/336 (28%), Gaps = 49/336 (14%)

Query: 15  RGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +  ++  L  QG     Y G   ++ SLH GHL   M   +LQ     P+ +
Sbjct: 76  RGIFFAHRDLNQILDLYEQGEKFYLYTGRGPSSESLHLGHLVPFMFTKYLQDAFKVPVVI 135

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                             + +  +  ++ I     I  +FI             N     
Sbjct: 136 QLTDDEKFLWKDLSIAESKRLARENAKDIIACGFDIERTFIFSDFEYVGGPFYEN----- 190

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE------- 186
                  + ++    + N +    +       E  +    F   +  A  F         
Sbjct: 191 -------MMQVAKRVTFNTL--RGTFG--FTPEDHIGKCCFP-PVQAAPSFASSFPHLFG 238

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFAL---TSPLLTTASGTKMGKTLSG 243
           +     C +     DQ        D+  ++  PK   +     P L    G KM  +   
Sbjct: 239 VNDQLRCLIPC-AIDQDPYFRLTRDVAPKIGYPKPSLIESKFFPALQGEIG-KMSASDPN 296

Query: 244 -AIWLN------KEMTSPYNF----------WQYWRNIDDADVVSFAKRLTTLPMSEIDR 286
            AI+L       KE    Y F           +Y  N+D    + +      L       
Sbjct: 297 TAIYLTDKPKVIKEKIRKYAFSSGQSTTELQRKYGANLDVDVCIKYLNF--FLEDDAEFE 354

Query: 287 MAKLQGKEINEAKKIIATEITTMVHGREEAEKAATA 322
             K + K  N     +   +T ++     A + A A
Sbjct: 355 HIKKEYKAGNMLTGKLKDHVTDILSKIALAHQNARA 390


>gi|167042515|gb|ABZ07240.1| putative tRNA synthetases class I (W and Y) [uncultured marine
           crenarchaeote HF4000_ANIW133C7]
          Length = 354

 Score = 52.5 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 34/235 (14%), Positives = 74/235 (31%), Gaps = 28/235 (11%)

Query: 21  ISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQL-MLLFWLQKTGHKPISLMGGGTS 79
           ++    L++  +      YIG +++   LH G L      +    K G      +    +
Sbjct: 19  VTQEELLELFKTNSKPKHYIGIEISG-FLHLGSLISTSFKINDFVKAGVDCTIFLADWHT 77

Query: 80  IIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYID 139
           ++ +             + I++  +     F              + ++        + +
Sbjct: 78  LLNEKMGG-------SFETIRKVSKYYDDAFRLVCPKANIVLGTDLYDS----KKEYWSE 126

Query: 140 LLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGG 199
            L +I    S+ R +   ++  R + ++ +   +  Y  +QA D   L    D  +   G
Sbjct: 127 -LVQIAKHMSLARTMRTLTIMGRSENDEKVDLAKLIYPAMQATDIHSL----DLDIVHAG 181

Query: 200 SDQWGNIICGIDL---GERLKTPKLF-----ALTSPLLTTASG--TKMGKTLSGA 244
            DQ    +   D+    +      +       L  P      G   KM K+   A
Sbjct: 182 MDQRKIHMLVKDVFPKMKWKVPVAVHHKLLPGLAKPPEEKPGGEVVKMSKSDPNA 236


>gi|169853411|ref|XP_001833385.1| tryptophanyl-tRNA synthetase [Coprinopsis cinerea okayama7#130]
 gi|116505424|gb|EAU88319.1| tryptophanyl-tRNA synthetase [Coprinopsis cinerea okayama7#130]
          Length = 435

 Score = 52.5 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 41/249 (16%), Positives = 78/249 (31%), Gaps = 31/249 (12%)

Query: 15  RGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG         + LD          Y G   ++ S+H GH+   +   WLQ     P+ +
Sbjct: 88  RGMFFSHREFDKILDRYEQGKPFFLYTGRGPSSDSMHLGHMVPFVFAKWLQDVFEVPLVI 147

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSS-FIKYGTGKTDALMLNNETWL 132
                         D+ + + + +   E  ++     +   I  G       + +N  ++
Sbjct: 148 -----------QLTDDEKFLFKHELKPEQTKQFSRQNAKDIIACGFNLERTFIFSNYEFM 196

Query: 133 CSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA---- 188
               Y ++ R I    + N++    +         ++  + F   I  A  F        
Sbjct: 197 GGPFYENVSR-ISRQITYNQV--RATFG--FNDSDNIGKIHFA-SIQAAPSFSNTFPQIF 250

Query: 189 ---KNYDCRLQMGGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTASGTKMGKTLS 242
                  C +     DQ        D+ ++LK PK   L +   P L     TKM  +  
Sbjct: 251 GTDSKVPCLIPC-AIDQDPYFRLTRDIAQKLKYPKPTLLHSKFFPALQGPQ-TKMSASDP 308

Query: 243 GAIWLNKEM 251
            +     + 
Sbjct: 309 NSSIFMTDK 317


>gi|146417394|ref|XP_001484666.1| hypothetical protein PGUG_02395 [Meyerozyma guilliermondii ATCC
           6260]
 gi|146390139|gb|EDK38297.1| hypothetical protein PGUG_02395 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 404

 Score = 52.5 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 34/216 (15%), Positives = 68/216 (31%), Gaps = 19/216 (8%)

Query: 32  SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESR 91
            +  V  Y G   T    H G+   ++ L  L K G +   L+    + +      D  +
Sbjct: 34  EKRPVKVYWGTAPTGRP-HCGYFVPMVKLADLLKAGCEVTVLLADLHAFL------DNMK 86

Query: 92  RMMRSQEIQENIEKIKGIFSSFIK--YGTGKTDALMLNNETWLCSIKYIDLLREIGSFFS 149
             +  + +Q   +    +  + +K           ++ +   L     +DL R       
Sbjct: 87  APL--ETVQFRAQYYGKLVKAILKSINVPIDKLKFVVGSSYQLSEKYTMDLFRLSNIVSQ 144

Query: 150 VNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICG 209
            +   +   V  ++            Y ++QA D   L    D  +Q GG DQ    +  
Sbjct: 145 NDAKRAGADVVKQVANPL---LSGLIYPLMQALDEEFL----DVDVQFGGVDQRKIFVLA 197

Query: 210 IDLGERLK-TPKLFALTSPLLTTASGTKMGKTLSGA 244
            +    L    +   +   +     G KM  +   +
Sbjct: 198 EENLPGLGYKKRAHLMNKMVPGLGQGGKMSASDPNS 233


>gi|229821438|ref|YP_002882964.1| tryptophanyl-tRNA synthetase [Beutenbergia cavernae DSM 12333]
 gi|229567351|gb|ACQ81202.1| tryptophanyl-tRNA synthetase [Beutenbergia cavernae DSM 12333]
          Length = 344

 Score = 52.5 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 38/244 (15%), Positives = 81/244 (33%), Gaps = 35/244 (14%)

Query: 34  GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSF---RDES 90
           G    + G   TA SLH G+    +  +   +  H  I  +    ++   P     R+ +
Sbjct: 8   GRPRVFSGMQPTADSLHLGNYLGALTQWVALQDTHDAIYCVVDLHALTVAPDPAVLRERT 67

Query: 91  RRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSV 150
           RR   +Q +   ++  + +             A +            +  L   G    +
Sbjct: 68  RRT-AAQYLAAGVDPARSVLFVQSHVAEHAELAWV------------LGCLTGYGEAARM 114

Query: 151 NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGI 210
            +    +    +     ++    F Y +L A D + L +     +   G DQ  ++    
Sbjct: 115 TQF--KDKSAKQGAEGTTVGL--FTYPVLMAADIL-LYRTNVVPV---GEDQRQHLELSR 166

Query: 211 DLGERLKT--------PKLFAL--TSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQ 259
           DL +R+ +        P+   +   + +   A  T KM K+      + + +  P    +
Sbjct: 167 DLAQRMNSRYGPLVPVPEAHIVREVAKIYDLADPTSKMSKSNGSVNGIIELLDDPKVIAK 226

Query: 260 YWRN 263
             R+
Sbjct: 227 RIRS 230


>gi|222528798|ref|YP_002572680.1| tryptophanyl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725]
 gi|222455645|gb|ACM59907.1| tryptophanyl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725]
          Length = 325

 Score = 52.5 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 32/175 (18%), Positives = 63/175 (36%), Gaps = 31/175 (17%)

Query: 160 RSRLKREQSLSFLEFN-YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK- 217
           + R  +E++++   F  Y  LQA D +     Y   L   G DQ  ++    ++  R   
Sbjct: 112 QMRELKERNIATYGFLGYPCLQAADILI----YKAELVPVGEDQLPHLELTREIARRFNF 167

Query: 218 -------TPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRN-IDDA-- 267
                   P+    T  +L    G KM K+    I L++++    +  +   N + D   
Sbjct: 168 LYGQTFPEPQAILNTVKVLVGTDGRKMSKSYGNTIALSEDL---ESVRKKVMNMVTDPAR 224

Query: 268 ------------DVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMV 310
                        V ++ +  +   +SE +   +       E KK +   I+  +
Sbjct: 225 IRKNDPGHPEVCTVFAYHQIFSPETVSETEEDCRQGKIGCVECKKRLFENISRFL 279


>gi|332879122|ref|ZP_08446823.1| tryptophan--tRNA ligase [Capnocytophaga sp. oral taxon 329 str.
           F0087]
 gi|332682922|gb|EGJ55818.1| tryptophan--tRNA ligase [Capnocytophaga sp. oral taxon 329 str.
           F0087]
          Length = 322

 Score = 52.5 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 63/187 (33%), Gaps = 24/187 (12%)

Query: 144 IGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQW 203
           +  FF   R+    S + ++   Q ++   F Y +L A D +     YD  +   G DQ 
Sbjct: 95  LSCFFPYQRLTLAHSFKDKMDYLQDVNAGLFTYPMLMAADILL----YDAEVVPVGKDQL 150

Query: 204 GNIICGIDLGERLKTPKLFALTSP---------LLTTASGTKMGKTLSG--AIWLNKEMT 252
            ++    D+  R           P         ++    G KM K+      I+L ++  
Sbjct: 151 QHLEITRDVASRFNHQMGETFVLPQAKIEERIMIIPGTDGEKMSKSRHNFINIFLPEKQL 210

Query: 253 SPYNFWQYWRNIDDAD--------VVSFAKRL-TTLPMSEIDRMAKLQGKEINEAKKIIA 303
                     +    D        V+   + L T   + +I+ + +  G    +AK+ + 
Sbjct: 211 RKQVMSIQTDSTPLEDPKDPTTCNVMKLYRLLATDDQVQQIEALYRAGGYGYGQAKQALY 270

Query: 304 TEITTMV 310
             I    
Sbjct: 271 ELILEQF 277


>gi|254168593|ref|ZP_04875436.1| tyrosyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|289595720|ref|YP_003482416.1| tyrosyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|197622427|gb|EDY34999.1| tyrosyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|289533507|gb|ADD07854.1| tyrosyl-tRNA synthetase [Aciduliprofundum boonei T469]
          Length = 338

 Score = 52.5 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 44/245 (17%), Positives = 89/245 (36%), Gaps = 39/245 (15%)

Query: 18  IHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGH-LTQLMLLFWLQKTGHKPISLMGG 76
           + ++    E +          Y+G + +   +H G  L     +  L   G   I  +  
Sbjct: 10  VEEVITLEEFENALKGNP-KGYVGLEPSGR-VHLGTGLIIGNKVKDLMDNGVDMIVFLAD 67

Query: 77  GTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSI- 135
             ++I D    D        ++I+   E +KG+FS+            +     W   + 
Sbjct: 68  WHAMINDKFGGD-------IEKIRLAGEYMKGVFSAL----------GIRPRYIWADELV 110

Query: 136 ----KYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
                +  ++R +    ++ R+    ++  R + E  L   +  Y  +Q  D      + 
Sbjct: 111 SKKEYWEKVIR-VAKKTTLKRVKRAMTIMGRKEDEAELDSSKIIYPFMQVSDIF----DM 165

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG--------TKMGKT-LS 242
           +  + +GG DQ    +   DL ++L   K  A+ + LL +  G         KM K+   
Sbjct: 166 ELDIALGGMDQRHAHMLARDLADKLGYKKPVAIHTVLLASLKGAGRMDPAEAKMSKSKEG 225

Query: 243 GAIWL 247
            AI++
Sbjct: 226 SAIFV 230


>gi|296314091|ref|ZP_06864032.1| tryptophan--tRNA ligase [Neisseria polysaccharea ATCC 43768]
 gi|296839348|gb|EFH23286.1| tryptophan--tRNA ligase [Neisseria polysaccharea ATCC 43768]
          Length = 336

 Score = 52.5 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 40/218 (18%), Positives = 61/218 (27%), Gaps = 49/218 (22%)

Query: 174 FNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSP------ 227
           F+Y IL   D +    N +  +   G DQ  ++    D+  R         T P      
Sbjct: 136 FSYPILMTADILMFNAN-EVPV---GRDQIQHVEMARDIAGRFNHRFQELFTLPEVKIDE 191

Query: 228 ---LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWR---------NIDDAD-VVSFAK 274
              LL    G KM K+    I L +                         D   +    K
Sbjct: 192 NVELLVGLDGRKMSKSYGNTIPLWENDKKTQKSVNKIITNMKEPGEPKQPDESPLFEIYK 251

Query: 275 RLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQ 334
             +T   +         G    EAKK++A +I        E  +      E    +    
Sbjct: 252 AFSTPSETAEFTQMLADGLAWGEAKKLLAAKINA------ELAEPREHYNEL---TADPS 302

Query: 335 HMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHL 372
            +  I                 ++AG   +  EAR  L
Sbjct: 303 QIEEI-----------------LQAGAQKARKEARELL 323


>gi|254169083|ref|ZP_04875920.1| tyrosyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|197621922|gb|EDY34500.1| tyrosyl-tRNA synthetase [Aciduliprofundum boonei T469]
          Length = 338

 Score = 52.5 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 44/245 (17%), Positives = 88/245 (35%), Gaps = 39/245 (15%)

Query: 18  IHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGH-LTQLMLLFWLQKTGHKPISLMGG 76
           + ++    E +          Y+G + +   +H G  L     +  L   G   I  +  
Sbjct: 10  VEEVITLEEFENTLKGNP-KGYVGLEPSGR-VHLGTGLIIGNKVKDLMDNGVDMIVFLAD 67

Query: 77  GTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSI- 135
             ++I D    D        ++I+   E +KG+FS+            +     W   + 
Sbjct: 68  WHAMINDKFGGD-------IEKIRLAGEYMKGVFSAL----------GIRPRYIWADELV 110

Query: 136 ----KYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
                +  ++R +    ++ R+    ++  R + E  L   +  Y  +Q  D      + 
Sbjct: 111 SKKEYWEKVIR-VAKKTTLKRVKRAMTIMGRKEDEAELDSSKIIYPFMQVSDIF----DM 165

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG--------TKMGKT-LS 242
           +  + +GG DQ    +   DL ++L   K  A+ + LL    G         KM K+   
Sbjct: 166 ELDIALGGMDQRHAHMLARDLADKLGYKKPVAIHTVLLAGLKGAGRMDPAEAKMSKSKEG 225

Query: 243 GAIWL 247
            AI++
Sbjct: 226 SAIFV 230


>gi|307203219|gb|EFN82374.1| Tryptophanyl-tRNA synthetase, cytoplasmic [Harpegnathos saltator]
          Length = 408

 Score = 52.5 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 59/352 (16%), Positives = 112/352 (31%), Gaps = 50/352 (14%)

Query: 15  RGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +   +  L  QG     Y G   ++ ++H GHL   M   WLQ   + P+ +
Sbjct: 70  RGIFFSHRDMHTILNLYEQGKPFYLYTGRGPSSDAMHLGHLIPFMFCKWLQDIFNVPLII 129

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                         D+ + + ++ +I++ I          I  G       + +N   + 
Sbjct: 130 -----------QLTDDEKAIWKNIKIEDAIRLAYTNARDIIACGFNPDKTFIFSNLEHIG 178

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA-------YDFVE 186
           +           +   + R ++F  V+       S S  +  +   QA       + F+ 
Sbjct: 179 NNPAF-----YQNMIRIQRCVTFNQVKGIFGFGDSDSIGKIAFPPTQAAPAVASSFPFIF 233

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTASGTKMGKTLSG 243
                 C +     DQ        D+  +L  PK   L +   P L  +  TKM  + S 
Sbjct: 234 RDAKVHCLIPC-AIDQDPYFRMTRDVAPKLGFPKPALLHSTFFPALQGSK-TKMSASDSN 291

Query: 244 -AIWLN------KEMTSPYNF----------WQYWRNIDDADVVSFAKRL--TTLPMSEI 284
            AI+L       K   + + F           Q   N +      + +        + EI
Sbjct: 292 TAIFLTDTAKQIKNKINKHAFSGGQATVEEHRQQGGNCEIDISYQWLQFFLEDDERLEEI 351

Query: 285 DRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM 336
            +          E KK +   +  +V   +EA+       +     +  + +
Sbjct: 352 RKGYTSGEILTGELKKELIEILQRLVAVHQEAKN--KITEDVIKRFMIPRDL 401


>gi|313212933|emb|CBY36833.1| unnamed protein product [Oikopleura dioica]
          Length = 672

 Score = 52.1 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 39/237 (16%), Positives = 76/237 (32%), Gaps = 29/237 (12%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R    ++    E+  + ++  V  Y G   T    H  +   +  +    + G +  
Sbjct: 137 LISRNL-EEVVGENEIKAVLAERSVKIYWGTATTGKP-HIAYFVPMSKIADFLRAGCEVQ 194

Query: 72  SLMGGGTSII---GDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
            L     + +     P      R     + I   +E I       + +  G         
Sbjct: 195 ILFADLHACLDNMKAPWELINYRVEYYRECITGMLESIGVPLDK-LSFVKGTDYQ----- 248

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR----LKREQSLSFLEFNYMILQAYDF 184
              L     +D        + ++ +++ +  +      +K+  S       Y  LQA D 
Sbjct: 249 ---LSKEYTLD-------AYKLSTIVTEKDAKKAGAEVVKQSDSAPLSGLIYPGLQALDE 298

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
             L       +Q GG DQ    +   +   +L   K   L +P++   +GTKM  + 
Sbjct: 299 EYLK----VDVQFGGVDQRKIFMYARENLPKLGYAKRSHLMNPMVPGLTGTKMSSSE 351


>gi|297568048|ref|YP_003689392.1| tryptophanyl-tRNA synthetase [Desulfurivibrio alkaliphilus AHT2]
 gi|296923963|gb|ADH84773.1| tryptophanyl-tRNA synthetase [Desulfurivibrio alkaliphilus AHT2]
          Length = 321

 Score = 52.1 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 32/215 (14%), Positives = 70/215 (32%), Gaps = 32/215 (14%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   +   LH G+   +M         H+  + +    ++    S  D  R  + +  ++
Sbjct: 6   GIQPSGQ-LHIGNYFGMMQPMISNMAEHELYAFIVDLHALT---SVHDAQR--LATGTLE 59

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETW-LCSIKYIDLLREIGSFFSVNRMLSFESV 159
             ++ +             ++D   +   TW L ++  + LL    S+         + +
Sbjct: 60  AAVDFMALGLEPERCIFWVQSDVPEVTELTWVLSTLTPMGLLERCHSY--------KDKI 111

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT- 218
              +     L    F Y +L A D + L +     +   G DQ  ++    D+  +  + 
Sbjct: 112 AKGIASSHGL----FAYPVLMAADIL-LYQAQRVPV---GKDQKQHLEVARDIAIKFNSL 163

Query: 219 --------PKLFALTSPLLTTASGTKMGKTLSGAI 245
                     +      ++    G KM K+    I
Sbjct: 164 FGDTFVLPEPVIDADLAVVPGLDGQKMSKSYGNTI 198


>gi|78060090|ref|YP_366665.1| tryptophanyl-tRNA synthetase II [Burkholderia sp. 383]
 gi|77964640|gb|ABB06021.1| tryptophanyl-tRNA synthetase [Burkholderia sp. 383]
          Length = 337

 Score = 52.1 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 55/341 (16%), Positives = 113/341 (33%), Gaps = 50/341 (14%)

Query: 45  TASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIE 104
           T   LH GH    +      +   K   L+    ++       +  RR   ++ + E   
Sbjct: 16  TGP-LHLGHYIGSLRARVQMQHEAKQFLLLADTQALTD-----NMGRRQRVTENVIEVAL 69

Query: 105 KIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-L 163
               +           +  ++ +    L  +    LL  +            E +R R  
Sbjct: 70  DYLAVG-----IDPAISTIVVQSQVPELAELSQY-LLNLVTVARLERNPTIKEEIRLRGF 123

Query: 164 KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP---- 219
           +R+    FL   Y + QA D       +   + +G  DQ   I    +L  R        
Sbjct: 124 ERDIPAGFL--TYPVSQAADITAFKATH---VPVG-DDQLPMIEQTNELVRRFNATVEQP 177

Query: 220 ---KLFALTSPL--LTTASGT-KMGKTLSGAIWL----NKEMTSPYNFWQ--YWRNIDDA 267
              +  A+ SP+  L    G  KM K+L  AI L    ++   +  + +       + D 
Sbjct: 178 VLVECEAVLSPVTRLPGIDGKAKMSKSLGNAITLGSTPDEITQAVKDMYTDPNHLRVSDP 237

Query: 268 DVVSFAKRLTTLP--------MSEIDRMAKLQGKEINEAKKIIATEITTMV------HGR 313
             V      T L         + E+    +  G   +  K+++   +  ++         
Sbjct: 238 GQVEGNVVFTFLDAFEPDVQKVDELKAHYRRGGLGDSVVKRVLDERLQALIEPIRARRRE 297

Query: 314 EEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLT 354
            EA+KA   A+     ++H++ +   ++++ + + G+    
Sbjct: 298 FEADKAEVMAI-LKRGTMHARDVAGATLAEVKGAMGLNYFD 337


>gi|220903318|ref|YP_002478630.1| tryptophanyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
 gi|219867617|gb|ACL47952.1| tryptophanyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
          Length = 329

 Score = 52.1 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 33/230 (14%), Positives = 76/230 (33%), Gaps = 46/230 (20%)

Query: 41  GYDLTASSLHAGHLTQLML----LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRS 96
           G   T   LH GH   ++     L   ++        +    ++  D +   +       
Sbjct: 10  GMRPTGP-LHLGHYFGVLKNWVELQHTEEA----YFFVADWHALTSDYADPSKVG-QNIR 63

Query: 97  QEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSF 156
           + +++ +             G    D ++          ++ +L   +     V+  L  
Sbjct: 64  EMVKDWVGA-----------GLNPEDCVIFRQS---AVKEHAELSLLLSMITPVSW-LER 108

Query: 157 ESVRSRLKREQSLSFLEF------NYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGI 210
                  +++Q +S  +        Y +L A D + + + +   +   G DQ  ++    
Sbjct: 109 NPTYK--EQQQQISNKDLGNAGFLCYPVLMAADIL-MYRPHGVPV---GEDQLPHMELTR 162

Query: 211 DLGERLK-------TPKLFALTSPLL--TTASGTKMGKTLSGAIWLNKEM 251
           ++  R          P+  A+ +P        G KM K+ +  I+L+  M
Sbjct: 163 EIARRFNYLYGGDLLPEPKAMLTPAAKCPGLDGRKMSKSYNNGIFLSDNM 212


>gi|295101325|emb|CBK98870.1| tryptophanyl-tRNA synthetase [Faecalibacterium prausnitzii L2-6]
          Length = 362

 Score = 52.1 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 41/239 (17%), Positives = 72/239 (30%), Gaps = 41/239 (17%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN 102
            T   LH GH    +     LQ +G      +     +I D      +      +++++N
Sbjct: 20  PTGR-LHVGHYVGSLKERVRLQNSGKFDEIYI-----MIADAQ--ALTDNADNPEKVRQN 71

Query: 103 IEKIKGIFSSFIKY-----GTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFE 157
           +          + Y        K    + +    L  + +  +     S    N  +  E
Sbjct: 72  V------LQVALDYLAVGIDPAKAHIFIQSMVPELTELSFYYMNLVTVSRLQRNPTVKAE 125

Query: 158 SVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQ------------WGN 205
             +   +    + F  F Y I QA D           +  G  DQ              N
Sbjct: 126 IQQKNFESSIPVGF--FTYPISQAADITAFKA---TTVPAG-EDQRPMIEQCCEIVHKFN 179

Query: 206 IICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNI 264
            + G  L E        +    L  T    KM K+L   I+L+ E   P +  +   ++
Sbjct: 180 AVYGETLVEPEIVLPQNSACLRLPGTDGKAKMSKSLGNCIYLSDE---PEDIKKKIMSM 235


>gi|118378144|ref|XP_001022248.1| tryptophanyl-tRNA synthetase family protein [Tetrahymena
           thermophila]
 gi|89304015|gb|EAS02003.1| tryptophanyl-tRNA synthetase family protein [Tetrahymena
           thermophila SB210]
          Length = 420

 Score = 52.1 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 55/323 (17%), Positives = 98/323 (30%), Gaps = 48/323 (14%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSF 86
           LD          Y G   +  S+H GHL   +   +LQ     P+ +      +  D  F
Sbjct: 90  LDNYEKGIPFYLYTGRGPSTESMHLGHLMPFIFTKYLQDAFDVPLVI-----QLTDDEKF 144

Query: 87  RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGS 146
             +    +     +E  +         I  G       +  N  ++  +     + +I  
Sbjct: 145 FHKGDFTL-----EEYQKLAIENAKDIIACGFDIEKTFIFRNTDYVGHMYPN--ICKIQK 197

Query: 147 FFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA-----YDFVELAKNYD--CRLQMGG 199
             + N++                   +F +  +QA       F  +  N +  C +  G 
Sbjct: 198 AVTYNQL--KGIFGVTPSDNCG----KFAFPAVQAAPAISTSFPHIFGNKNVFCLIPQG- 250

Query: 200 SDQWGNIICGIDLGERLKTPKLFAL---TSPLLTTASGTKMGKTLSG-AIWLNKE----- 250
            DQ        D+  +LK PK   +     P L    GTKMG T+   AI+L        
Sbjct: 251 IDQDPYFRMTRDVQYKLKVPKTACIHSKFFPSLQGF-GTKMGSTVPNSAIFLTDTPKQIK 309

Query: 251 ----------MTSPYNFWQYWRNIDDADVVSFAKRL--TTLPMSEIDRMAKLQGKEINEA 298
                       +     Q+  ++       + +        + EI            E 
Sbjct: 310 EKINKSVSGGRATKEEQEQFGADLTVDIPYHYLRFFLEDDARLEEIRVKYSTGKMLTGEV 369

Query: 299 KKIIATEITTMVHGREEAEKAAT 321
           KK +   +  ++   +E  KA T
Sbjct: 370 KKELIGILQKIIGDHQEKRKAIT 392


>gi|126457253|ref|YP_001076558.1| tryptophanyl-tRNA synthetase II [Burkholderia pseudomallei 1106a]
 gi|242311663|ref|ZP_04810680.1| tryptophan--tRNA ligase [Burkholderia pseudomallei 1106b]
 gi|126231021|gb|ABN94434.1| tryptophanyl-tRNA synthetase [Burkholderia pseudomallei 1106a]
 gi|242134902|gb|EES21305.1| tryptophan--tRNA ligase [Burkholderia pseudomallei 1106b]
          Length = 346

 Score = 52.1 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 44/292 (15%), Positives = 90/292 (30%), Gaps = 43/292 (14%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
            T + LH GH    +      +  H+   L+    ++  +    D+ RR      + E  
Sbjct: 20  PTGA-LHLGHYIGSLKTRIALQDTHRQFILVADTQALTDNAHDPDKVRR-----NVIEVA 73

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR- 162
                +          ++   + +    L  +     L  +            + + +R 
Sbjct: 74  LDYLAVG-----IDPRRSTIAVQSGLPALAELTLF-YLNFVTVARLERNPTIKDEIHARG 127

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT---- 218
             R+    FL   Y + QA D      +    + +G  DQ   I    ++  R+      
Sbjct: 128 FGRDIPAGFL--CYPVAQAADITAFKAD---TVPVG-DDQLPLIEQTNEIVRRVNRQAGA 181

Query: 219 ---PKLFALTSPL--LTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYW------RNIDD 266
              P+  AL SP   L    G  KM K+   AI L+    +  +  +          + D
Sbjct: 182 DVLPEASALISPTGRLPGVDGKAKMSKSQGNAIALSSSPDAIADAVRRMYTDPNHLRVSD 241

Query: 267 ------ADVVSFAKRLTTLP--MSEIDRMAKLQGKEINEAKKIIATEITTMV 310
                   V ++     + P  +  +    +  G      K+ +   +  ++
Sbjct: 242 PGTVEGNVVFTYLDAFDSEPDELERLKAAYRAGGLGDMVLKRRLEDRLQALI 293


>gi|302524150|ref|ZP_07276492.1| tryptophanyl-tRNA synthetase [Streptomyces sp. AA4]
 gi|302433045|gb|EFL04861.1| tryptophanyl-tRNA synthetase [Streptomyces sp. AA4]
          Length = 339

 Score = 52.1 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 53/308 (17%), Positives = 97/308 (31%), Gaps = 51/308 (16%)

Query: 32  SQGVVTAYIGYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSII--GDPSFRD 88
             G +    G   TA S H G+    L     LQ T H+    +    +I    DP    
Sbjct: 5   QNGRLRVLSGIQPTADSFHLGNYLGALRQWVRLQDT-HETFYCVVDLHAITVEQDP---- 59

Query: 89  ESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFF 148
              +++  +  +   + +             ++        +W        +L     F 
Sbjct: 60  ---KVLLERTRRSAAQLLAIGVDPARSALFVQSHVPEHAQLSW--------VLECQTGFG 108

Query: 149 SVNRMLS-FESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNII 207
              RM    +    +     S+    F Y +L A D + L +     +   G DQ  ++ 
Sbjct: 109 EAGRMTQFKDKAAKQGSDHASVGL--FTYPVLMAADIL-LYQTNAVPV---GEDQRQHLE 162

Query: 208 CGIDLGERLKT--PKLFALTSPLLTTASGT---------KMGKTLSGAIWLNKEMTSPYN 256
              +L +R  +   K F +  P +   +           KM K+ S    L + +  P  
Sbjct: 163 LTRNLAQRFNSRFGKTFVMPEPFIVKDTAKIYDLQEPTAKMSKSASTGNGLIELLEDPKR 222

Query: 257 FWQYWRN-IDD------------ADVVSFAKRLTTLPMSEIDRMAKL-QGKEINEAKKII 302
             +  R+ + D            A V +     + L    I  +    +GK   + KK +
Sbjct: 223 SAKKIRSAVTDTGREVRFDREEKAGVSNLLTIYSALTDRTIADLETAYEGKGYGDLKKDL 282

Query: 303 ATEITTMV 310
           A  +   V
Sbjct: 283 AEVLVDWV 290


>gi|114555390|ref|XP_001164386.1| PREDICTED: tyrosyl-tRNA synthetase isoform 7 [Pan troglodytes]
          Length = 598

 Score = 52.1 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 43/230 (18%), Positives = 70/230 (30%), Gaps = 23/230 (10%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R    ++    +L  +  +  +  Y G   T    H  +   +  +    K G +  
Sbjct: 13  LITRNL-QEVLGEEKLKEILKERELKIYWGTATTGKP-HVAYFVPMSKIADFLKAGCEVT 70

Query: 72  SLMGGGTSII---GDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
            L     + +     P    E R       I+  +E I       +K+  G         
Sbjct: 71  ILFADLHAYLDNMKAPWELLELRVSYYENVIKAMLESIGVPLEK-LKFIKGTDYQ----- 124

Query: 129 ETWLCSIKYIDLLREIGSFFSV-NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
              L     +D+ R         ++    E V+   + E  L      Y  LQA D   L
Sbjct: 125 ---LSKEYTLDVYRLSSVVTQHDSKKAGAEVVK---QVEHPL-LSGLLYPGLQALDEEYL 177

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
                   Q GG DQ             L   K   L +P++   +G+KM
Sbjct: 178 K----VDAQFGGVDQRKIFTFAEKYLPALGYSKRVHLMNPMVPGLTGSKM 223


>gi|229815083|ref|ZP_04445420.1| hypothetical protein COLINT_02125 [Collinsella intestinalis DSM
           13280]
 gi|229809313|gb|EEP45078.1| hypothetical protein COLINT_02125 [Collinsella intestinalis DSM
           13280]
          Length = 349

 Score = 52.1 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 38/216 (17%), Positives = 69/216 (31%), Gaps = 33/216 (15%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN 102
            T   LH GH    +     LQ+ G     L+          + RD +  +     +   
Sbjct: 36  PTGR-LHLGHYFGTLKSRVELQELGVHTNVLIADY----QVITDRDSTDNIQ--DNVYNM 88

Query: 103 IEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES-VRS 161
           +                    +  ++    C+   +  L  +        +L     V++
Sbjct: 89  VIDYLACG------LDPDKTMIYTHSAVPACNQLMLPFLSLVSE-----ALLQRNPTVKA 137

Query: 162 RLK-REQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT-- 218
            ++     L+ L   Y + QA D   L    +      G DQ  +I     +  +     
Sbjct: 138 EMEASGHELTGLLLTYPVHQACD--ILFCKGNVV--PVGRDQLPHIELTRTIARKFNNRY 193

Query: 219 ----PKLFALT--SPLLTTASGTKMGKTLSGAIWLN 248
               P++ AL   +PLL    G KM K+   AI ++
Sbjct: 194 GNVFPEVDALLSDTPLLPGLDGRKMSKSYGNAINIS 229


>gi|320163051|gb|EFW39950.1| tryptophanyl-tRNA synthetase [Capsaspora owczarzaki ATCC 30864]
          Length = 461

 Score = 52.1 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 52/335 (15%), Positives = 105/335 (31%), Gaps = 51/335 (15%)

Query: 15  RGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +    LD          Y G   ++ S+H GHL   ++   +Q     P+ +
Sbjct: 129 RGIFFSHRDLHGVLDRYEKGERFYLYTGRGPSSDSMHVGHLIPFLMTKAMQDMFGVPLVI 188

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                         D+ + + ++  +++     +      I  G       + +N  ++ 
Sbjct: 189 -----------QMTDDEKFLWKNMTLEDGYRFTRENAKDIIACGFDIKKTFIFSNLKFMG 237

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA-YDFVELA---- 188
              Y ++LR       + +++S  +V+      +S +  +F +   QA   F        
Sbjct: 238 GAFYENILR-------IQKLVSEHTVKKMFGFSESDNIGKFGFPANQASPAFSNTFPFIF 290

Query: 189 ---KNYDCRLQMGGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTASGTKMGKT-L 241
                 DC +     DQ        D+  RL   K   + +   P L  +  +KM  + L
Sbjct: 291 GAKSTVDCLIPC-AIDQDPYFRMTRDVAPRLGYKKPALVHSKFFPALQGSQ-SKMSASDL 348

Query: 242 SGAIWLNKEMTSPYNFWQYW----------------RNIDDADVVSFAKRL--TTLPMSE 283
           + +I+L        +    +                 N D      +          +  
Sbjct: 349 TTSIFLTDTPEQIKSKINKYAFSGGQVTREEQERLGANCDIDVSYQYLSFFLDDDEELER 408

Query: 284 IDRMAKLQGKEINEAKKIIATEITTMVHGREEAEK 318
           I         +  E KK +   +  +V   +EA K
Sbjct: 409 IRVAYSSGKMQTGEIKKRVIEVLQKLVAKHQEARK 443


>gi|271962808|ref|YP_003337004.1| tryptophan--tRNA ligase [Streptosporangium roseum DSM 43021]
 gi|270505983|gb|ACZ84261.1| Tryptophan--tRNA ligase [Streptosporangium roseum DSM 43021]
          Length = 334

 Score = 52.1 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 55/297 (18%), Positives = 90/297 (30%), Gaps = 47/297 (15%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   TA S H G+    +  +   + GH     +    +I  D       RR        
Sbjct: 9   GIQPTADSFHLGNYLGAVRQYVAMQEGHDAFYCVVDLHAITVDYQPETLRRR-----TRV 63

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
              +               ++     +   W        +L  +       RM  F+  +
Sbjct: 64  AAAQLFAAGLDPERSTVFVQSHVREHSELAW--------VLICLTGMGEAGRMTQFKD-K 114

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
           S    E S S   F Y ILQA D + L +     +   G+DQ  ++    DL +R     
Sbjct: 115 SAKSGESSASVGLFTYPILQAADIL-LYQADKVPV---GADQKQHLELTRDLAQRFNHRF 170

Query: 221 LFALTSPLLTTASGT-----------KMGKTLSGAIWLNKEMTSPYNFWQYWRN------ 263
               T P     +G            KM K+ S    +   +  P    +          
Sbjct: 171 GETFTLPKPHIVAGVEKITDLQDPTAKMSKSSSSPGGILDLLEQPGPLRKKVMRAVTDTG 230

Query: 264 ---IDDAD----VVSFAKR---LTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMV 310
              + D +    V +  +    LT  P+SE++     QG      KK +A  +    
Sbjct: 231 SEVLADDENKPGVTNLLRIQSALTGTPISELEARYAGQG--YGAFKKDVAEVVVDTF 285


>gi|42572249|ref|NP_974219.1| tRNA synthetase class I (W and Y) family protein [Arabidopsis
           thaliana]
 gi|332640583|gb|AEE74104.1| tryptophanyl-tRNA synthetase [Arabidopsis thaliana]
          Length = 402

 Score = 52.1 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 54/325 (16%), Positives = 96/325 (29%), Gaps = 52/325 (16%)

Query: 25  RELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDP 84
             LD          Y G   ++ +LH GHL   M   +LQ+    P+ +           
Sbjct: 78  EILDAYERGDKFYLYTGRGPSSEALHLGHLIPFMFTKYLQEAFKVPLVIQLTDDEKSIWK 137

Query: 85  SFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREI 144
           +   E  + +  +  ++ I     +  +FI             N            + ++
Sbjct: 138 NLSVEESQRLARENAKDIIACGFDVTKTFIFSDFDYVGGAFYKN------------MVKV 185

Query: 145 GSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY-----DFVELA---KNYDCRLQ 196
           G   ++N+ +           E  ++ L F    +QA       F  L     N  C + 
Sbjct: 186 GKCVTLNKAMG--IFG--FSGEDPIAKLSF--PPVQAVPSFPSSFPHLFPGKDNLRCLIP 239

Query: 197 MGGSDQWGNIICGIDLGERLK-TPKLFA--LTSPLLTTASGTKMGKTLSG-AIWL-NKEM 251
               DQ        D+  RL  +          P L   +G KM  +    AI++ +   
Sbjct: 240 C-AIDQDPYFRMTRDVAPRLGYSKPALIESTFFPALQAKNG-KMSASDPNSAIYVTDSAK 297

Query: 252 TSPYNFWQYWRNIDDADVVSFAKR------------LT-TLPMSEIDRMAKLQGKEIN-- 296
                  +Y  +     +    +             L+  L         K +  E    
Sbjct: 298 DIKNKINRYAFSGGQDSIEKHRELGANLEVDIPVKYLSFFLEDDSELEHIKKEYGEGRML 357

Query: 297 --EAKKIIATEITTMV--HGREEAE 317
             E KK +   +T +V  H R  A 
Sbjct: 358 TGEVKKRLTEVLTEIVERHRRARAA 382


>gi|330845266|ref|XP_003294514.1| tyrosine-tRNA ligase [Dictyostelium purpureum]
 gi|325075005|gb|EGC28955.1| tyrosine-tRNA ligase [Dictyostelium purpureum]
          Length = 383

 Score = 52.1 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 44/241 (18%), Positives = 84/241 (34%), Gaps = 30/241 (12%)

Query: 13  SER-GFIHQ-----ISNPRELDILCSQGVVTAYIGYDLTASSLHA--GHLTQLMLLFWLQ 64
            ER   I Q     IS    + +L  +  +  Y G++ +   +H   G L  + +   + 
Sbjct: 40  KERLELIKQVGEEIISEESLIRLLNGKERLRCYDGFEPSGR-MHIAQGILKSINV-NRMT 97

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
           K G   I  +    +++ +        +M         + +           G    +  
Sbjct: 98  KAGCTFIFWVADWFAMLNN--------KMNGDLNKIRKVGQYMIEIWKAT--GMDMENVE 147

Query: 125 MLNNETWLCSIKYIDLLR--EIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
            L +   +        LR  +I   F+V R+     +  R   E  L   +  Y  +Q  
Sbjct: 148 FLWSSDEINKNPNDYWLRVMDIARKFNVPRIKKCSQIMGR-NEEDDLMCAQLLYPCMQCA 206

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLLTT-ASGT-KMGK 239
           D   L  +  C+L   G DQ    +  I+  +++K   K   ++  +L+    G  KM K
Sbjct: 207 DIFYLKADI-CQL---GMDQRKVNMLAIEYCDKVKIKNKPIIVSHHMLSGLKEGQEKMSK 262

Query: 240 T 240
           +
Sbjct: 263 S 263


>gi|288803809|ref|ZP_06409236.1| tryptophan--tRNA ligase [Prevotella melaninogenica D18]
 gi|288333716|gb|EFC72164.1| tryptophan--tRNA ligase [Prevotella melaninogenica D18]
          Length = 362

 Score = 52.1 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 48/301 (15%), Positives = 85/301 (28%), Gaps = 63/301 (20%)

Query: 44  LTASSLHAGHLTQLMLLFW---LQKTGH--KPISLMGGGTSIIGDPSFRDESRRMMRSQE 98
            T   LH GH      L     LQ  G   K    M    ++         +      ++
Sbjct: 11  PTGK-LHLGHYVG--SLRRRVELQNLGDYDKMFVFMADVQAL---------TDNADNPEK 58

Query: 99  IQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNR-MLSFE 157
           I++N   I  +   ++  G       +          +    L  + S   V R      
Sbjct: 59  IRQN---IIEVALDYLSAGLSPEKCTLYIQSQIPEIAELTTFLMNLVSVSRVQRNPTVKT 115

Query: 158 SVRSR-LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL 216
            ++ R  +    + F  F Y + QA D           +  G  DQ   +    +L  R 
Sbjct: 116 EIKMRNFEANIPMGF--FAYPVSQAADIAAFKA---TTVPAG-EDQEPMLELTRELVRRF 169

Query: 217 KTPKLFALTSPL-----------LTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYW--- 261
                  L  P            L    G  KM K+L   I+L+ +  + +   +     
Sbjct: 170 NQIYAPVLVEPAIMLPENATARRLPGTDGKEKMSKSLGNCIYLSDDADTVWKKVKTMYTD 229

Query: 262 ---RNIDD------ADVVSFAKRLT-----------TLPMSEIDRMAKLQGKEINEAKKI 301
               N+ D        V ++    +              + E+       G    + KK+
Sbjct: 230 PTHLNVSDPGHVEGNAVFTYLDAFSTNEDFAEFWPEFQNLDELKAAYTAGGIGDMKCKKL 289

Query: 302 I 302
           +
Sbjct: 290 L 290


>gi|302345045|ref|YP_003813398.1| tryptophan--tRNA ligase [Prevotella melaninogenica ATCC 25845]
 gi|302149354|gb|ADK95616.1| tryptophan--tRNA ligase [Prevotella melaninogenica ATCC 25845]
          Length = 362

 Score = 52.1 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 48/301 (15%), Positives = 85/301 (28%), Gaps = 63/301 (20%)

Query: 44  LTASSLHAGHLTQLMLLFW---LQKTGH--KPISLMGGGTSIIGDPSFRDESRRMMRSQE 98
            T   LH GH      L     LQ  G   K    M    ++         +      ++
Sbjct: 11  PTGK-LHLGHYVG--SLRRRVELQNLGDYDKMFVFMADVQAL---------TDNADNPEK 58

Query: 99  IQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNR-MLSFE 157
           I++N   I  +   ++  G       +          +    L  + S   V R      
Sbjct: 59  IRQN---IIEVALDYLSAGLSPEKCTLYIQSQIPEIAELTTFLMNLVSVSRVQRNPTVKT 115

Query: 158 SVRSR-LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL 216
            ++ R  +    + F  F Y + QA D           +  G  DQ   +    +L  R 
Sbjct: 116 EIKMRNFEANIPMGF--FAYPVSQAADIAAFKA---TTVPAG-EDQEPMLELTRELVRRF 169

Query: 217 KTPKLFALTSPL-----------LTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYW--- 261
                  L  P            L    G  KM K+L   I+L+ +  + +   +     
Sbjct: 170 NQIYAPVLVEPAIMLPENATARRLPGTDGKEKMSKSLGNCIYLSDDADTVWKKVKTMYTD 229

Query: 262 ---RNIDD------ADVVSFAKRLT-----------TLPMSEIDRMAKLQGKEINEAKKI 301
               N+ D        V ++    +              + E+       G    + KK+
Sbjct: 230 PTHLNVSDPGHVEGNAVFTYLDAFSTDEDFAEFWPEFQNLDELKAAYTAGGIGDMKCKKL 289

Query: 302 I 302
           +
Sbjct: 290 L 290


>gi|262193467|ref|YP_003264676.1| tryptophanyl-tRNA synthetase [Haliangium ochraceum DSM 14365]
 gi|262076814|gb|ACY12783.1| tryptophanyl-tRNA synthetase [Haliangium ochraceum DSM 14365]
          Length = 327

 Score = 52.1 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 61/343 (17%), Positives = 105/343 (30%), Gaps = 49/343 (14%)

Query: 37  TAYIGYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMR 95
           T + G   +   LH G+    +     LQ+T      ++    +I      R E R+ + 
Sbjct: 3   TLFSGIQPSGE-LHLGNYLGAVRNWVELQETYFCYFCIV-DYHAITQSYE-RSEMRKRVF 59

Query: 96  SQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLS 155
              +      I    S      +      +     W        +L  +  F  + RM  
Sbjct: 60  DMAVDLLACGIDPERSVLFVQSSVPEHTELC----W--------VLNTVAQFGDLGRMTQ 107

Query: 156 FESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER 215
           F+    R +   ++    F+Y +LQA D + L K     +   G DQ  +I     L   
Sbjct: 108 FKDKSKRQEDNINVGL--FDYPVLQAADIL-LYKAAAVPV---GKDQEQHIEFTRRLARG 161

Query: 216 LKTP--KLFA------LTSPLLTTASGT-KMGKTLSGAIWLNK-EMTSPYNFWQ-----Y 260
                 K+FA         P L    G  KM K+L   I L   E        Q      
Sbjct: 162 FNNRWSKVFAEPEARFSAVPKLLGLDGKAKMSKSLDNTIPLAATEKQIRKKLAQAVTDPK 221

Query: 261 WRNIDD---ADVVSFAKRLTTLPMSEIDRMAKL----QGKEINEAKKIIATEITTM---V 310
               +D    D  +     T     +  +  +      G    + KK ++  +       
Sbjct: 222 RETREDPGNPDDCNLYTLHTFFSSEDEQQWVRQGCTTAGIGCVDCKKKLSDNVIDHLADY 281

Query: 311 HGREEAEKA--ATAAMECFDMSIHSQHMPTISISKDEVSRGMG 351
           H R EA  A  A         +  ++     ++++     G+ 
Sbjct: 282 HKRREALLATPAQVDEILAKGAEKARATAQKTMAEVRKKLGLW 324


>gi|302865265|ref|YP_003833902.1| tryptophanyl-tRNA synthetase [Micromonospora aurantiaca ATCC 27029]
 gi|315501809|ref|YP_004080696.1| tryptophanyl-tRNA synthetase [Micromonospora sp. L5]
 gi|302568124|gb|ADL44326.1| tryptophanyl-tRNA synthetase [Micromonospora aurantiaca ATCC 27029]
 gi|315408428|gb|ADU06545.1| tryptophanyl-tRNA synthetase [Micromonospora sp. L5]
          Length = 341

 Score = 52.1 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 50/303 (16%), Positives = 94/303 (31%), Gaps = 51/303 (16%)

Query: 37  TAYIGYDLTASSLHAGHLTQLMLLFWLQ--KTGHKPISLMGGGTS-IIGDPSFRDESRRM 93
             + G   TA S H G+      L      +  H     +    +   G      + R  
Sbjct: 9   RVFSGIQPTADSFHLGNYLG--ALRHWVALQDSHDAYYCVVDLHAITAGHDPLVLKRRSR 66

Query: 94  MRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRM 153
           + + ++                    ++   + +       + +  +L  I  F    RM
Sbjct: 67  LAAAQLFALG------------LDPERSTLFVQSQVPEHSQLAW--VLGCITGFGEAGRM 112

Query: 154 LS-FESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL 212
               +  + +     S+    F Y ILQA D + L +     +   G DQ  ++    DL
Sbjct: 113 TQFKDKSQKQGSERASVGL--FTYPILQAADIL-LYQANAVPV---GEDQRQHLELSRDL 166

Query: 213 --------GERLKTPKLFAL--TSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYW 261
                   G     P    +  T+ +      T KM K+ S    +   +  P    +  
Sbjct: 167 AQRFNSLFGRTFTVPSPHIVKDTAKITDLQDPTAKMSKSSSSPAGIIDLLEDPARSAKKI 226

Query: 262 RN---------IDDAD----VVSFAKRLTTLPMSEIDR-MAKLQGKEINEAKKIIATEIT 307
           R+         + DA+    + +     + L    +D  +A   GK   + KK +A  + 
Sbjct: 227 RSAVTDTGREIVFDAEGKPGITNLLTIYSALSGRSVDDLVAAYDGKGYGDLKKDLAEVVR 286

Query: 308 TMV 310
             V
Sbjct: 287 EFV 289


>gi|261749172|ref|YP_003256857.1| tryptophan--tRNA ligase [Blattabacterium sp. (Periplaneta
           americana) str. BPLAN]
 gi|261497264|gb|ACX83714.1| tryptophan--tRNA ligase [Blattabacterium sp. (Periplaneta
           americana) str. BPLAN]
          Length = 329

 Score = 52.1 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 38/192 (19%), Positives = 67/192 (34%), Gaps = 33/192 (17%)

Query: 147 FFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNI 206
           FF   R+    S +  + R+  ++   F Y +L A D +     Y+  +   G DQ  +I
Sbjct: 98  FFPYQRLTLAHSFKREISRKGKINVGLFTYPMLMAADILL----YNAEVIPVGKDQLQHI 153

Query: 207 ICGIDL---------GERLKTPKLFA-LTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYN 256
                +          +    PK F  + + L+    G KM K+     W+N  + S   
Sbjct: 154 EITRHIASHLNKKIGQKLFVLPKAFIPIKTGLVPGTDGKKMSKSQKN--WIN--IFSSDE 209

Query: 257 FWQY-WRNI------------DDAD-VVSFAKRLTTLP-MSEIDRMAKLQGKEINEAKKI 301
             +    +I             D D +++  + L  L  + E+ +     G    EAKK 
Sbjct: 210 ILKKQIMSIHTDNKSLKEKKNPDKDCIMALYRLLAPLDRVEEMKKRYIKGGYGYLEAKKE 269

Query: 302 IATEITTMVHGR 313
           +   I       
Sbjct: 270 LYECILKKFSSE 281


>gi|148230505|ref|NP_001080746.1| tyrosyl-tRNA synthetase, cytoplasmic [Xenopus laevis]
 gi|82176511|sp|Q7ZX51|SYYC_XENLA RecName: Full=Tyrosyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Tyrosyl--tRNA ligase; Short=TyrRS
 gi|28175663|gb|AAH45236.1| Yars-prov protein [Xenopus laevis]
          Length = 528

 Score = 52.1 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 42/235 (17%), Positives = 70/235 (29%), Gaps = 23/235 (9%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            L  R    ++    ++  +  +  +  Y G   T    H  +   +  +    K G + 
Sbjct: 12  QLITRNL-QELLGEDKMKEILKERPLRIYWGTATTGKP-HVAYFVPMSKIADFLKAGCEV 69

Query: 71  ISLMGGGTSII---GDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
             L     + +     P    E R     Q IQ  ++ I       +++  G        
Sbjct: 70  TILFADLHAYLDNMKAPWDLLELRTRYYEQVIQAMLQSIGVPLER-LRFIRGTEFQ---- 124

Query: 128 NETWLCSIKYIDLLREIGSFFSV-NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
               L     +D+ R          +    E V+   + E  L      Y  LQA D   
Sbjct: 125 ----LSKEYTLDVYRLSSVVTQHDAKKAGAEVVK---QVEHPL-LSGLLYPGLQALDEEY 176

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
           L        Q GG DQ             L   K   L +P++   +G KM  + 
Sbjct: 177 LK----VDAQFGGVDQRKIFTFAEKYLPALGYAKRIHLMNPMVPGLTGAKMSSSE 227


>gi|256086378|ref|XP_002579377.1| tryptophanyl-tRNA synthetase [Schistosoma mansoni]
 gi|238664808|emb|CAZ35616.1| tryptophanyl-tRNA synthetase, putative [Schistosoma mansoni]
          Length = 411

 Score = 52.1 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 57/345 (16%), Positives = 112/345 (32%), Gaps = 54/345 (15%)

Query: 9   LSILSERGFIHQISNPRELDILCS-QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           L  L +R       +  ++ +    +     Y G   ++ +LH GH+   ++  W Q   
Sbjct: 65  LHHLLKRRIFFSHRDFEQIILRIEQKKPFFLYTGRGPSSEALHLGHVVPFIINKWFQDVF 124

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
             P+ +              D+ + + ++  I E     +      I  G       + +
Sbjct: 125 DIPLVI-----------QLTDDEKFLWKNLSISEVSHLTRENAKDIIAMGFDPKKTFIFS 173

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA------ 181
           N  ++      D  R +     + R++++   R+      S    + ++  +QA      
Sbjct: 174 NFEYMG--TCPDFYRTV---CQIQRLVTYNQARAIFGFSDSDCIGKISFPAIQAAPSFAQ 228

Query: 182 ---YDFVELAK--NYDCRLQMGGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTAS 233
                F  L K  +  C +     DQ        D+  RL   K   ++++  P L    
Sbjct: 229 SFPTVFENLKKPEDVGCLIPC-AIDQDPYFRMTRDVAPRLGLLKPSLIYSVFFPALQGNQ 287

Query: 234 GTKMGKTLSG-AIWLNK------EMTSPYNFWQYWRNID---------DADV-VSFAKRL 276
            TKM  +    +++L           + Y +      I          D DV   + K  
Sbjct: 288 -TKMSASNPNTSVFLTDTPKQIRNKINKYAYSGGGDTIAEHRERGGNCDIDVSYQYLKFF 346

Query: 277 --TTLPMSEIDRMAKLQGKEINEAKKIIATEITTMV--HGREEAE 317
                 + +I +          E KK + T +T  V  H R+ A 
Sbjct: 347 LEDDQKLEQIRQDYSSGKLLTGEIKKELITLLTEFVTEHQRKRAA 391


>gi|324505749|gb|ADY42466.1| Tyrosyl-tRNA synthetase [Ascaris suum]
          Length = 715

 Score = 52.1 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 42/242 (17%), Positives = 82/242 (33%), Gaps = 23/242 (9%)

Query: 10  SILSERGFI----HQISNPRELDILCSQGV-VTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
             L  R  I     ++    ++    S G  +  Y G   T    H G+L  +  +    
Sbjct: 19  EALQRRDLIIRNLQEVLGLEKITKQLSSGKNIHIYWGTATTGRP-HVGYLVPMRKIADFL 77

Query: 65  KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK-YGTGKTDA 123
           K G K   L     + +   + +         + ++  +   + +  + ++         
Sbjct: 78  KAGLKVTVLFADLHAFL--DNMKS------TWELLENRVIYYEHVIKALLRALDVPIDKL 129

Query: 124 LMLNNETW-LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
             +   ++ L      D+LR        + + +   V  +++       L     +LQA 
Sbjct: 130 HFVKGTSYQLKRDYTSDILRLCNQVSRRDALRAGAEVVKQVESPLLSGLLY---PLLQAM 186

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           D   L        Q GG DQ    I   +   +LK  K F L +P++    G+KM  +  
Sbjct: 187 DEQYLK----VDGQFGGLDQRKIFILAEEQMPKLKLGKRFHLMNPMVPGLQGSKMSSSEE 242

Query: 243 GA 244
           G+
Sbjct: 243 GS 244


>gi|308471672|ref|XP_003098066.1| CRE-WARS-1 protein [Caenorhabditis remanei]
 gi|308269407|gb|EFP13360.1| CRE-WARS-1 protein [Caenorhabditis remanei]
          Length = 420

 Score = 52.1 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 67/338 (19%), Positives = 111/338 (32%), Gaps = 73/338 (21%)

Query: 15  RGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +   +  L  QG     Y G   ++ SLH GHL   M   WLQ+    P+ +
Sbjct: 82  RGMFFAHRDFVAILDLKEQGKPFYLYTGRGASSGSLHLGHLVPFMFTKWLQEVFDVPLVI 141

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGI-FSSFIKYGTGKTDALMLNNETWL 132
                         D+ + +   +   E+ +K+        I  G   T   + N+  ++
Sbjct: 142 -----------QMTDDEKFLWNEKMKVEDAKKMARQNMKDIISVGFDPTKTFIFNDFDYM 190

Query: 133 CSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY-----DFVEL 187
           C   Y ++++ I    + N+  +          E  +    F    ++A       F  +
Sbjct: 191 CPPFYENIVK-IWKVVNANQ--ARAIFG--FTPEDCMGKAAF--PAVEAAPCFASSFPHI 243

Query: 188 AKNYD------CRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG--TKMGK 239
                      C +     DQ        D+  RLK  K   + S  L    G  TKM  
Sbjct: 244 FGEKGKKNDIPCLIPC-AIDQDPYFRMCRDVAPRLKAAKPSLIFSSFLPALQGAQTKMSA 302

Query: 240 TLSGA-IWLN------KEMTSPYNF----------------------WQYWR--NIDDAD 268
           +     I+LN      K   + Y F                      +Q+ R    DDA+
Sbjct: 303 SEPNTCIFLNDTPNQIKNKINKYAFSGGQQTVEEHRAKGGNCDVDISFQFLRFFLEDDAE 362

Query: 269 VVSFAKRLT--TLPMSEIDRMAKLQGKEINEAKKIIAT 304
           +    ++ T   L   E+   A L      E +KI+A 
Sbjct: 363 LARIREQYTKGELLSGELKARATL------EVQKIVAE 394


>gi|256273838|gb|EEU08760.1| Nam9p [Saccharomyces cerevisiae JAY291]
          Length = 486

 Score = 52.1 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/125 (21%), Positives = 46/125 (36%), Gaps = 16/125 (12%)

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLT---- 354
           +K  A + T   HG    EK        F   + S      S+   E+     LL     
Sbjct: 44  QKWTAKQETRAYHGEHLTEK---RWQTVFKPKLDSVAQLDASLRGGEIKETPFLLQTFAV 100

Query: 355 -------LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL--S 405
                   + +A FA+S  +AR+ +    +++N   I +    +K  D  S   +K+  +
Sbjct: 101 LEKRLDFALFRAMFASSVRQARQFILHGNVRVNGVKIKHPSYTLKPGDMFSVKPVKVLEA 160

Query: 406 FGKKN 410
            G K 
Sbjct: 161 LGAKK 165


>gi|242085756|ref|XP_002443303.1| hypothetical protein SORBIDRAFT_08g017220 [Sorghum bicolor]
 gi|241943996|gb|EES17141.1| hypothetical protein SORBIDRAFT_08g017220 [Sorghum bicolor]
          Length = 408

 Score = 51.7 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 59/338 (17%), Positives = 110/338 (32%), Gaps = 57/338 (16%)

Query: 15  RGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +  EL  L  +G     Y G   ++ +LH GHL   M   +LQ+    P+ +
Sbjct: 73  RGLFFAHRDLNELLDLYEKGEKFYLYTGRGPSSEALHLGHLIPFMFTKYLQEAFKVPLVI 132

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                      +   +  + +  +  ++ I     I  +FI             N     
Sbjct: 133 QLTDDEKFLWKNLTVQESKRLARENAKDIIACGFDIERTFIFSDFSYVGGAFYEN----- 187

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY-----DFVELA 188
                  + ++    ++N+ +        L+        + ++  +QA       F  L 
Sbjct: 188 -------MMQVARCVTMNKAIG--IFGFNLEDHIG----KVSFPPVQAVPSFPSSFPHLF 234

Query: 189 KNYD---CRLQMGGSDQWGNIICGIDLGERLKTPKLFAL---TSPLLTTASGTKMGKTLS 242
              D   C +     DQ        D+  R+   K   +     P L   + TKM  + +
Sbjct: 235 AGKDQLRCLIPC-AIDQDPYFRMTRDVAPRIGYQKPSLIESRFFPALQGEN-TKMSASDA 292

Query: 243 G-AIWLN------KEMTSPYNFWQYWRNID---------DADV-VSFAKRLTTLPMSEID 285
             AI++       K   + Y F     +I+         D DV + +      L   +  
Sbjct: 293 NSAIYVTDSAKEIKTKVNKYAFSGGQDSIELHRKLGANLDVDVPIKYLNF--FLEDDDEL 350

Query: 286 RMAKLQGKEIN----EAKKIIATEITTMV--HGREEAE 317
              K + KE      E K+ +   ++ +V  H R  A+
Sbjct: 351 AHIKKEYKEGRMLTGEVKQRLIAVLSEIVARHQRARAQ 388


>gi|222147750|ref|YP_002548707.1| hemolysin A [Agrobacterium vitis S4]
 gi|221734738|gb|ACM35701.1| hemolysin A [Agrobacterium vitis S4]
          Length = 263

 Score = 51.7 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 9/47 (19%), Positives = 17/47 (36%)

Query: 348 RGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
               L  L+V      S + AR  ++   +K+N   ++   L     
Sbjct: 11  EPQRLDQLLVALNLFASRSRARDAVQRGGVKVNGRTVTKPSLTFSPD 57


>gi|157364368|ref|YP_001471135.1| tryptophanyl-tRNA synthetase [Thermotoga lettingae TMO]
 gi|157314972|gb|ABV34071.1| tryptophanyl-tRNA synthetase [Thermotoga lettingae TMO]
          Length = 328

 Score = 51.7 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 36/223 (16%), Positives = 69/223 (30%), Gaps = 40/223 (17%)

Query: 41  GYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           G   T    H G+    L     LQ+ G++    +    ++    S  DE  +    + +
Sbjct: 6   GVRPTGKP-HVGNYIGALKNWKKLQEEGNECFYFVADWHALTTAYSETDEL-KTFTREVM 63

Query: 100 QENIEK-------IKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNR 152
           +  +         I  + S+  ++        M+   +WL  +     +R+        +
Sbjct: 64  RSFLACGLNPEKSILFVQSAIKEHSELALLFSMIVPISWLERVPTYKEMRQ--------Q 115

Query: 153 MLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL 212
           +   +                  Y +LQA D + +       +   G DQ  ++    ++
Sbjct: 116 LSDKDL------SNAGF----LLYPVLQAADIL-MYLAEGVPV---GEDQTYHVELTREI 161

Query: 213 GERLK--------TPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
             R           PK      P L    G KM K+    I L
Sbjct: 162 ARRFNYIYGETFPEPKTLLSIIPKLPGTDGRKMSKSYGNTIPL 204


>gi|182436495|ref|YP_001824214.1| tryptophanyl-tRNA synthetase [Streptomyces griseus subsp. griseus
           NBRC 13350]
 gi|326777117|ref|ZP_08236382.1| tryptophanyl-tRNA synthetase [Streptomyces cf. griseus XylebKG-1]
 gi|178465011|dbj|BAG19531.1| putative tryptophanyl-tRNA synthetase [Streptomyces griseus subsp.
           griseus NBRC 13350]
 gi|326657450|gb|EGE42296.1| tryptophanyl-tRNA synthetase [Streptomyces cf. griseus XylebKG-1]
          Length = 352

 Score = 51.7 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 50/297 (16%), Positives = 92/297 (30%), Gaps = 47/297 (15%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSII--GDPSFRDESRRMMRSQE 98
           G   TA S H G+    +  +   +  H    ++    +I    DP+    + R+  +Q 
Sbjct: 26  GIQPTAGSFHLGNYLGAVRQWVALQESHDAFYMVVDLHAITIPQDPAELRANTRLAVAQL 85

Query: 99  IQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
           +   ++  +                 ++N  T       +   ++  +    +R      
Sbjct: 86  LAAGVDPERCTLFVQSHVPEHAQLGWVMNCLTGFGEASRMTQFKDKSAKQGADRAT---- 141

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
                     L    F Y +LQ  D + L +     +   G DQ  +I    DL ER   
Sbjct: 142 --------VGL----FTYPVLQVADIL-LYQANQVPV---GEDQRQHIELTRDLAERFNG 185

Query: 219 PKLFALTSPLL-----------TTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRN-IDD 266
                 T P                   KM K+ S    L   +  P    +  ++ + D
Sbjct: 186 RYGQTFTVPAPYILKETAKIFDLQDPAVKMSKSASTPKGLINLLDDPKVTAKKVKSAVTD 245

Query: 267 AD------------VVSFAKRLTTLPMSEIDRMAKL-QGKEINEAKKIIATEITTMV 310
            D            V +    L+TL  S ++ + +  +GK     K  +A  +   V
Sbjct: 246 TDTVIRFDAEEKPGVSNLLTILSTLSGSPVEDLERSYEGKGYGALKTDLAEAMVEFV 302


>gi|225446410|ref|XP_002275626.1| PREDICTED: hypothetical protein [Vitis vinifera]
 gi|302143316|emb|CBI21877.3| unnamed protein product [Vitis vinifera]
          Length = 399

 Score = 51.7 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 58/336 (17%), Positives = 100/336 (29%), Gaps = 53/336 (15%)

Query: 15  RGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +  E LD          Y G   ++ +LH GHL   M   +LQ     P+ +
Sbjct: 64  RGVFFAHRDLNEVLDAYERGDKFYLYTGRGPSSEALHLGHLVPFMFTKYLQDAFKVPLVI 123

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                      +   E  + +  +  ++ I     I  +FI             N     
Sbjct: 124 QLTDDEKCMWKNLSVEESQRLARENAKDIIACGFDISRTFIFSDFDYVGGAFYKN----- 178

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY-----DFVELA 188
                  + ++G   + N+++           E  +  + F    +QA       F  L 
Sbjct: 179 -------MVKVGKCVTYNKVVG--IFG--FTGEDHIGKVSF--PPVQAVPSFPSSFPHLF 225

Query: 189 KNYD---CRLQMGGSDQWGNIICGIDLGERLKTPKLF---ALTSPLLTTASGTKMGKTLS 242
              D   C +     DQ        D+  R+   K     +L  P L   +G KM  +  
Sbjct: 226 SGKDDLRCLIPC-AIDQDPYFRMTRDVAPRIGYHKPALIESLFFPALQGETG-KMSASDP 283

Query: 243 G-AIWLN------KEMTSPYNFWQ----------YWRNIDDADVVSFAKRL--TTLPMSE 283
             AI++       K   + Y F            Y  N++    + +          +  
Sbjct: 284 NSAIYVTDSGKDIKNKINKYAFSGGQDSIENHRKYGANLEVDIPIKYLGFFLEDDAELEY 343

Query: 284 IDRMAKLQGKEINEAKKIIATEITTMV--HGREEAE 317
           I            + KK +   +T +V  H R  A 
Sbjct: 344 IRTEYGAGRMLTGDVKKRLIEVLTELVERHRRARAA 379


>gi|237805279|ref|ZP_04591983.1| tyrosyl-tRNA synthetase [Pseudomonas syringae pv. oryzae str. 1_6]
 gi|331026387|gb|EGI06442.1| tyrosyl-tRNA synthetase [Pseudomonas syringae pv. oryzae str. 1_6]
          Length = 70

 Score = 51.7 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 15/71 (21%), Positives = 26/71 (36%), Gaps = 6/71 (8%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
           +  M +  ++ KAG   +   AR  L S  ++I+  ++ +     KL             
Sbjct: 4   AEDMPISAVLNKAGLVKNAAVARDLLASGGVRIDGEVV-DRSFVFKL-----GATHVCQA 57

Query: 407 GKKNHIICHLC 417
           GKK      L 
Sbjct: 58  GKKAFGRVTLV 68


>gi|123249051|emb|CAM19725.1| tyrosyl-tRNA synthetase [Mus musculus]
 gi|148698262|gb|EDL30209.1| tyrosyl-tRNA synthetase [Mus musculus]
          Length = 564

 Score = 51.7 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 43/230 (18%), Positives = 69/230 (30%), Gaps = 23/230 (10%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R    ++    +L  +  +  +  Y G   T    H  +   +  +    K G +  
Sbjct: 49  LITRNL-QEVLGEEKLKEILKERELKVYWGTATTGKP-HVAYFVPMSKIADFLKAGCEVT 106

Query: 72  SLMGGGTSII---GDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
            L     + +     P    E R       I+  +E I       +K+  G         
Sbjct: 107 ILFADLHAYLDNMKAPWELLELRTSYYENVIKAMLESIGVPLEK-LKFIKGTDYQ----- 160

Query: 129 ETWLCSIKYIDLLREIGSFFSV-NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
              L     +D+ R          +    E V+   + E  L      Y  LQA D   L
Sbjct: 161 ---LSKEYTLDVYRLSSVVTQHDAKKAGAEVVK---QVEHPL-LSGLLYPGLQALDEEYL 213

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
                   Q GG DQ             L   K   L +P++   +G+KM
Sbjct: 214 K----VDAQFGGVDQRKIFTFAEKYLPALGYSKRVHLMNPMVPGLTGSKM 259


>gi|193641272|ref|XP_001945437.1| PREDICTED: tyrosyl-tRNA synthetase, cytoplasmic [Acyrthosiphon
           pisum]
          Length = 527

 Score = 51.7 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 43/229 (18%), Positives = 74/229 (32%), Gaps = 24/229 (10%)

Query: 18  IHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGG 77
           + ++    +LD++  +  +  Y G   T    H  +   +  +    K G +   L    
Sbjct: 15  LQEVLGEDKLDVILKERDLKIYWGTATTGRP-HIAYFVPISKIADYLKAGCEVTILFADL 73

Query: 78  TSII---GDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCS 134
            + +     P    E R       I+  +  I       +K+  G            L  
Sbjct: 74  HAYLDNMKAPWELLELRVQYYEHSIKAMLSSIGVSLEK-LKFVRGTEYQ--------LSK 124

Query: 135 IKYIDLLREIGSFFSV--NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYD 192
              +D+ R + S  SV   +    E V+   + +  L      Y  LQA D   L     
Sbjct: 125 EYTMDMYR-LSSSISVHDAKKAGAEVVK---QVDNPL-LSGLLYPGLQALDEEYLK---- 175

Query: 193 CRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
              Q GG DQ            +L   K   L +P++   +G KM  + 
Sbjct: 176 VDAQFGGVDQRKIFTMSEKYLPQLGYEKRIHLMNPMVPGLAGGKMSSSE 224


>gi|326796037|ref|YP_004313857.1| tryptophanyl-tRNA synthetase [Marinomonas mediterranea MMB-1]
 gi|326546801|gb|ADZ92021.1| tryptophanyl-tRNA synthetase [Marinomonas mediterranea MMB-1]
          Length = 336

 Score = 51.7 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 55/348 (15%), Positives = 106/348 (30%), Gaps = 62/348 (17%)

Query: 50  HAGHLTQLM--LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE-NIEKI 106
           H G+    +   +    +   +    +    ++I     +D  R      EI    +   
Sbjct: 17  HLGNYVGAIRPAIEASNRADTEAFFFLADYHALI---KCQDAERVQQSRLEIAATWLACG 73

Query: 107 KGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE 166
                +     +   +   LN   WL +      L      +        E+V S    +
Sbjct: 74  LDTDKATFYRQSDIPEISELN---WLLTCVTAKGLMNRAHAYKAGV---DENVASEQDPD 127

Query: 167 QSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT-------- 218
             ++   F Y +L A D +     +   +   G DQ  +I    D+  R           
Sbjct: 128 FGITMGLFCYPVLMAADILAFNA-HKVPV---GRDQIQHIEMARDIAGRFNHIYGSEFFV 183

Query: 219 --PKLFALTSPLLTTASGTKMGKTLSGAI-WLNKEMTSPYNFWQYWRNI---------DD 266
               +   ++ +L    G KM K+ +  I   + E        +   N+         +D
Sbjct: 184 MPEAVVGDSTAILQGLDGRKMSKSYNNTIPLFDTEKKLKKGINKIKTNLLEPGEPKDPND 243

Query: 267 ADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMEC 326
           + V    +   T   +E  R     G    EAKK    E+  +V+G+     A    +E 
Sbjct: 244 STVFEVYQAFATPEQTEEMRQKFADGIAWGEAKK----ELFELVNGQ--LGDAREKYLEL 297

Query: 327 FDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKS 374
                              ++    +  ++ +AG   +   AR H+K 
Sbjct: 298 -------------------MANPAQIEEVL-QAGAVKARARARDHIKQ 325


>gi|313234909|emb|CBY24854.1| unnamed protein product [Oikopleura dioica]
          Length = 552

 Score = 51.7 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 39/237 (16%), Positives = 76/237 (32%), Gaps = 29/237 (12%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R    ++    E+  + ++  V  Y G   T    H  +   +  +    + G +  
Sbjct: 17  LISRNL-EEVVGENEIKAVLAERSVKIYWGTATTGKP-HIAYFVPMSKIADFLRAGCEVQ 74

Query: 72  SLMGGGTSII---GDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
            L     + +     P      R     + I   +E I       + +  G         
Sbjct: 75  ILFADLHACLDNMKAPWELINYRVEYYRECITGMLESIGVPLDK-LSFVKGTDYQ----- 128

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR----LKREQSLSFLEFNYMILQAYDF 184
              L     +D        + ++ +++ +  +      +K+  S       Y  LQA D 
Sbjct: 129 ---LSKEYTLD-------AYKLSTIVTEKDAKKAGAEVVKQSDSAPLSGLIYPGLQALDE 178

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
             L       +Q GG DQ    +   +   +L   K   L +P++   +GTKM  + 
Sbjct: 179 EYLK----VDVQFGGVDQRKIFMYARENLPKLGYAKRSHLMNPMVPGLTGTKMSSSE 231


>gi|13541820|ref|NP_111508.1| tyrosyl-tRNA synthetase [Thermoplasma volcanium GSS1]
 gi|74575493|sp|Q979Z1|SYY_THEVO RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|14325257|dbj|BAB60161.1| tRNA synthetase Tyr [Thermoplasma volcanium GSS1]
          Length = 331

 Score = 51.7 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 45/247 (18%), Positives = 91/247 (36%), Gaps = 39/247 (15%)

Query: 20  QISNPRELDILCSQGVVTAYIGYDLTA-SSLHAGHLTQL-MLLFWLQKTGHKPISLMGGG 77
           +I    +   L  +  V +YIG + +     H          L  LQ    K   L+   
Sbjct: 12  EIVTLEDAQKLDQKAGVKSYIGIEPSGIP--HVATAVMWPRKLAELQD-DIKIYVLLADW 68

Query: 78  TSII-----GDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL 132
            ++I     GD     +   +++   + E + K + +++S +          + ++  W 
Sbjct: 69  HAMINNKLHGDLDLIRKGGELLKRSFMAEGLTKAEYLWASQL----------VSSSNYW- 117

Query: 133 CSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYD 192
                 ++  +     ++ R+     +  R + +    F  + Y I+Q  D   L    D
Sbjct: 118 ------EMFIKTAKRSTLKRLTRALPIMGRTEADAEKDFSMYIYPIMQVTDIFYL----D 167

Query: 193 CRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-------TKMGKTLSG-A 244
             +  GG DQ    +   D+ +++K  K  ++   LL++  G        KM K+    A
Sbjct: 168 VDIAFGGMDQRHAHMLARDIADKMKVKKAVSVHGYLLSSLKGNTRMDNFVKMSKSDPNSA 227

Query: 245 IWLNKEM 251
           I +N E 
Sbjct: 228 ILINDEY 234


>gi|300123319|emb|CBK24592.2| unnamed protein product [Blastocystis hominis]
          Length = 455

 Score = 51.7 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 54/327 (16%), Positives = 97/327 (29%), Gaps = 53/327 (16%)

Query: 15  RGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +    LD          Y G   ++ SLH GHL       WLQ   H P+ +
Sbjct: 125 RGLFFSHRDLNLILDAYEKGEKFYLYTGRGPSSGSLHLGHLIPFFFTKWLQDVFHCPLVI 184

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                         D+ + + +   + E  +         I  G       + N+  ++ 
Sbjct: 185 -----------QLTDDEKFLWKKLTLDECRQMCIDNAKDIIACGFDPKLTFIFNDMRYIG 233

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ-AYDF------VE 186
            +     +  I    +VN   +          + ++    F    +Q A  F      V 
Sbjct: 234 EMYPN--IVRIQKCVTVNT--ARAIFG--FSDDSNIGQQAF--PAIQAAPSFSSSFPRVL 285

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDL-GERLKTPKL--FALTSPLLTTASGTKMGKTLSG 243
            +    C +     DQ        D+     +       +   P LT   GTKM  +   
Sbjct: 286 CSSKLRCLIPC-AIDQDPYFRMTRDVAVRLKEFKPALIHSKFIPSLTGL-GTKMSASTQN 343

Query: 244 A-IWLNKEMTSPYNFWQYW-----RNIDD------ADVVS-----FAKRLTTLPMSEIDR 286
             I++        N    +     R  ++      AD+       + +        E+ R
Sbjct: 344 TCIYVTDTANQIKNKINKYAVSGGRETEEEQRRLGADLAKDIPYQYLEYF-LEDEEELMR 402

Query: 287 MAKLQGKEIN---EAKKIIATEITTMV 310
           +            E KKI+  E+ T++
Sbjct: 403 IKAEYASGKMLTGEVKKILIKELQTLI 429


>gi|15922395|ref|NP_378064.1| tyrosyl-tRNA synthetase [Sulfolobus tokodaii str. 7]
 gi|15623184|dbj|BAB67173.1| 294aa long hypothetical tyrosyl-tRNA synthetase [Sulfolobus
           tokodaii str. 7]
          Length = 294

 Score = 51.7 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 54/146 (36%), Gaps = 19/146 (13%)

Query: 110 FSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSL 169
                 YG   +   ++  E  +    Y  L+  I    S+ RM    ++  R   E  L
Sbjct: 31  IEVLNAYGVDMSKVRIVYAEDLVKDSNYWALVIRIAKNTSLARMKRALTIMGRKAEEAEL 90

Query: 170 SFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLL 229
              +  Y  +Q  D   L ++ D  L  GG+DQ    +   D+ ++L   K+ A+ +PLL
Sbjct: 91  DTSKLIYPAMQVAD--ILYQDLDIAL--GGTDQRKAHMLARDVSDKLGKKKVIAIHTPLL 146

Query: 230 TTASG---------------TKMGKT 240
               G                KM K+
Sbjct: 147 IGLQGGQRMEGVEEDDYLASVKMSKS 172


>gi|301062568|ref|ZP_07203206.1| tryptophan--tRNA ligase [delta proteobacterium NaphS2]
 gi|300443333|gb|EFK07460.1| tryptophan--tRNA ligase [delta proteobacterium NaphS2]
          Length = 327

 Score = 51.7 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 51/289 (17%), Positives = 95/289 (32%), Gaps = 46/289 (15%)

Query: 41  GYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           G   T   LH GHL   L+    LQ+   +    +    ++  D +      +    + I
Sbjct: 9   GMRPTGK-LHLGHLRGALLNWKKLQEE-FQCFYFIADWHALTSDYADTKII-KESTYEII 65

Query: 100 QENIE-KIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
            + I   +    S+F      K  A +    +    + +++  R       +  +   + 
Sbjct: 66  MDWISVGLDPEKSTFFVQSDIKEHAELYLLFSMFTPLPWLE--RNPTYKEQLKELSHKDL 123

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
                      ++    Y +LQA D + + K     +   G DQ  ++    ++  R   
Sbjct: 124 F----------TYGFLGYPVLQAADIL-MYKAIGVPV---GEDQAPHVELTREIARRFN- 168

Query: 219 PKLFALTSPL----------LTTASGTKMGKTLSGAIWL-------NKEMTSPYNFWQYW 261
             ++  T P+          L      KM K+   AI+L       + ++       Q  
Sbjct: 169 -HIYGETFPVPKVLLTPTSKLLGMDRRKMSKSYGNAIFLTDTDKEIDTKVGQMITDPQRA 227

Query: 262 RNIDDAD-----VVSFAKRLTT-LPMSEIDRMAKLQGKEINEAKKIIAT 304
           R  D  D     V SF +  T      EI+   K       + KK++A 
Sbjct: 228 RKTDPGDPEICNVFSFHEIYTDEKTCREIEEACKSAEIGCVQCKKMMAK 276


>gi|291408865|ref|XP_002720753.1| PREDICTED: tyrosyl-tRNA synthetase [Oryctolagus cuniculus]
          Length = 528

 Score = 51.7 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 43/230 (18%), Positives = 69/230 (30%), Gaps = 23/230 (10%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R    ++    +L  +  +  +  Y G   T    H  +   +  +    K G +  
Sbjct: 13  LITRNL-QEVLGEEKLKEILKERELKVYWGTATTGKP-HVAYFVPMSKIADFLKAGCEVT 70

Query: 72  SLMGGGTSII---GDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
            L     + +     P    E R       I+  +E I       +K+  G         
Sbjct: 71  ILFADLHAYLDNMKAPWELLELRTSYYENVIKAMLESIGVPLEK-LKFVKGTDYQ----- 124

Query: 129 ETWLCSIKYIDLLREIGSFFSV-NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
              L     +D+ R          +    E V+   + E  L      Y  LQA D   L
Sbjct: 125 ---LSKEYTLDVYRLSSVVTQHDAKKAGAEVVK---QVEHPL-LSGLLYPGLQALDEEYL 177

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
                   Q GG DQ             L   K   L +P++   +G+KM
Sbjct: 178 K----VDAQFGGVDQRKIFTFAEKYLPALGYSKRVHLMNPMVPGLTGSKM 223


>gi|89270952|emb|CAJ82065.1| tyrosyl-tRNA synthetase [Xenopus (Silurana) tropicalis]
          Length = 241

 Score = 51.7 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 42/235 (17%), Positives = 70/235 (29%), Gaps = 23/235 (9%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            L  R    ++    ++  +  +  +  Y G   T    H  +   +  +    K G + 
Sbjct: 12  QLITRNL-QEVLGEDKMKEILKERPLRIYWGTATTGKP-HVAYFVPMSKIADFLKAGCEV 69

Query: 71  ISLMGGGTSII---GDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
             L     + +     P    E R     Q IQ  ++ I       +++  G        
Sbjct: 70  TILFADLHAYLDNMKAPWDLLELRTRYYEQVIQAMLQSIGVPLER-LRFIRGTEFQ---- 124

Query: 128 NETWLCSIKYIDLLREIGSFFSV-NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
               L     +D+ R          +    E V+   + E  L      Y  LQA D   
Sbjct: 125 ----LSKEYTLDVYRLSSVVTQHDAKKAGAEVVK---QVEHPL-LSGLLYPGLQALDEEY 176

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
           L        Q GG DQ             L   K   L +P++   +G KM  + 
Sbjct: 177 LK----VDAQFGGVDQRKIFTFAEKYLPALGYAKRIHLMNPMVPGLTGAKMSSSE 227


>gi|304316918|ref|YP_003852063.1| tryptophanyl-tRNA synthetase [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302778420|gb|ADL68979.1| tryptophanyl-tRNA synthetase [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 327

 Score = 51.7 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 44/303 (14%), Positives = 96/303 (31%), Gaps = 50/303 (16%)

Query: 35  VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMM 94
           +   + G   T   +H G+    M  F   +  +  +  +    ++              
Sbjct: 1   MQRVFSGVQPTGD-IHIGNYLGAMRQFVKLQNDYSCLFCIVDLHALT----------VPQ 49

Query: 95  RSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRML 154
             + ++   +K   +   ++  G      ++          +   LL+ +  F  ++RM 
Sbjct: 50  DPETLR---KKSIELAGLYLAIGLDPKKVIIFVQSHVPEHPELAWLLQCMTYFGELSRMT 106

Query: 155 SFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
                + + K ++++S   F Y  L A D +     YD      G+DQ  ++    D+  
Sbjct: 107 Q---FKDKSKGKETVSVGLFTYPDLMAADILL----YDTNFVPVGNDQKQHLELTRDIAI 159

Query: 215 RLKT--PKLFALTSPLLTTAS---------GTKMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
           R      + F +  P++               KM K+          +  P    +    
Sbjct: 160 RFNNRFGETFVVPEPMILKTGSRIMSLTEPDKKMSKSSENQYSKINLLDEPSQIKKKIMR 219

Query: 264 -IDDAD-VVSF--------------AKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
            + D++ V+ +                  T + + E +   K QG      KK +A  I 
Sbjct: 220 AVTDSENVIRYDPENKPGLSNLLTLYSSFTDISIEEAEARFKGQG--YGTLKKELADVIV 277

Query: 308 TMV 310
             +
Sbjct: 278 ERL 280


>gi|83955333|ref|ZP_00963988.1| RNA pseudouridylate synthase family protein [Sulfitobacter sp.
           NAS-14.1]
 gi|83840326|gb|EAP79500.1| RNA pseudouridylate synthase family protein [Sulfitobacter sp.
           NAS-14.1]
          Length = 335

 Score = 51.7 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 13/56 (23%), Positives = 26/56 (46%), Gaps = 1/56 (1%)

Query: 342 SKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
            K     G  +  ++ +AG A S  EA R +++  +++N + I +  L +   D  
Sbjct: 10  PKSGTPPGDRIAKVLSRAGIA-SRREAERMIEAGRVRVNGAQIDSPALNVTPSDAI 64


>gi|118576611|ref|YP_876354.1| tyrosyl-tRNA synthetase [Cenarchaeum symbiosum A]
 gi|118195132|gb|ABK78050.1| tyrosyl-tRNA synthetase [Cenarchaeum symbiosum A]
          Length = 345

 Score = 51.7 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 44/237 (18%), Positives = 74/237 (31%), Gaps = 30/237 (12%)

Query: 19  HQISNPRELDILCSQGV-VTAYIGYDLTASSLHAGHLTQL-MLLFWLQKTGHKPISLMGG 76
            +I    E+  L         YIG +++   LH G L      +  L K G      +  
Sbjct: 16  EEIVTEDEMHELLGSEAHPRHYIGLEISG-FLHLGSLVSTGYKVNDLAKAGVDCTIFLAD 74

Query: 77  GTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN--NETWLCS 134
             ++I D    D  R       I    +  +  F +        T   + +   E W   
Sbjct: 75  WHTMINDKLGGDMDR-------IARVADYYRRAFGAVCPTAEIITGTDLYDEHPEYWTE- 126

Query: 135 IKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCR 194
                 L        + R +   ++  R +  + L   +  Y  +QA D   L    D  
Sbjct: 127 ------LVRFTMHMPLARTMRALTIMGRSEDAEKLDLGKLIYPAMQAVDIHFL----DVD 176

Query: 195 LQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-------TKMGKTLSGA 244
           +   G DQ    +   ++  ++      AL   LL   S         KM K+  G+
Sbjct: 177 IAHAGMDQRRIHMLVREIYPKMGWKVPVALHQRLLPGLSRPADSSAPAKMSKSDPGS 233


>gi|255534341|ref|YP_003094712.1| Tryptophanyl-tRNA synthetase [Flavobacteriaceae bacterium 3519-10]
 gi|255340537|gb|ACU06650.1| Tryptophanyl-tRNA synthetase [Flavobacteriaceae bacterium 3519-10]
          Length = 322

 Score = 51.7 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 38/261 (14%), Positives = 84/261 (32%), Gaps = 40/261 (15%)

Query: 50  HAGHLTQLML--LFWLQKTGHKPISLMGGGTSIIGDPSFRDESR-RMMRSQEIQENIEKI 106
           H G+L   ++  +   +K+ ++    +    S+      ++    R    +     +   
Sbjct: 15  HLGNLLGAIIPAIELSKKSDNESFLFIANLHSLT---QIKNAGELRQNTYEIAAAWLACG 71

Query: 107 KGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE 166
                +F    +   +   L   +W            +  FF   R+    S + +  R 
Sbjct: 72  LDTDKTFFYRQSDIPEVCEL---SWY-----------LSCFFPYQRLTLAHSFKDKADRL 117

Query: 167 QSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL--KTPKLFAL 224
           + ++   F Y +L   D +     YD  +   G DQ  ++    D+G R   +  ++F L
Sbjct: 118 EDVNAGLFTYPVLMGADILL----YDAEVVPVGKDQLQHLEMARDMGSRFNHQMGEVFVL 173

Query: 225 -TSPL------LTTASGTKMGKTLSG--AIWLNKEMTSPYNFW-----QYWRNIDDADVV 270
            T+ L      +    G KM K+      I+L ++             +      D +  
Sbjct: 174 PTAELQEETKYVPGTDGQKMSKSRGNIINIFLPEKELKKQVMGIETDSKSLEEPKDPETD 233

Query: 271 SFAKRLTTLPMSEIDRMAKLQ 291
                   +  +E     + +
Sbjct: 234 KVFAIFKLIATAEEAEFLREK 254


>gi|83944513|ref|ZP_00956965.1| RNA pseudouridylate synthase family protein [Sulfitobacter sp.
           EE-36]
 gi|83844619|gb|EAP82504.1| RNA pseudouridylate synthase family protein [Sulfitobacter sp.
           EE-36]
          Length = 335

 Score = 51.7 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 13/56 (23%), Positives = 26/56 (46%), Gaps = 1/56 (1%)

Query: 342 SKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
            K     G  +  ++ +AG A S  EA R +++  +++N + I +  L +   D  
Sbjct: 10  PKSGTPPGDRIAKVLSRAGIA-SRREAERMIEAGRVRVNGAQIDSPALNVTPSDAI 64


>gi|74137799|dbj|BAE24073.1| unnamed protein product [Mus musculus]
          Length = 528

 Score = 51.7 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 43/230 (18%), Positives = 69/230 (30%), Gaps = 23/230 (10%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R    ++    +L  +  +  +  Y G   T    H  +   +  +    K G +  
Sbjct: 13  LITRNL-QEVLGEEKLKKILKERELKVYWGTATTGKP-HVAYFVPMSKIADFLKAGCEVT 70

Query: 72  SLMGGGTSII---GDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
            L     + +     P    E R       I+  +E I       +K+  G         
Sbjct: 71  ILFADLHAYLDNMKAPWELLELRTSYYENVIKAMLESIGVPLEK-LKFIKGTDYQ----- 124

Query: 129 ETWLCSIKYIDLLREIGSFFSV-NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
              L     +D+ R          +    E V+   + E  L      Y  LQA D   L
Sbjct: 125 ---LSKEYTLDVYRLSSVVTQHDAKKAGAEVVK---QVEHPL-LSGLLYPGLQALDEEYL 177

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
                   Q GG DQ             L   K   L +P++   +G+KM
Sbjct: 178 K----VDAQFGGVDQRKIFTFAEKYLPALGYSKRVHLMNPMVPGLTGSKM 223


>gi|269121674|ref|YP_003309851.1| tryptophanyl-tRNA synthetase [Sebaldella termitidis ATCC 33386]
 gi|268615552|gb|ACZ09920.1| tryptophanyl-tRNA synthetase [Sebaldella termitidis ATCC 33386]
          Length = 324

 Score = 51.7 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 42/272 (15%), Positives = 81/272 (29%), Gaps = 52/272 (19%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   +   LH G+    +  F   +  ++    +    ++   P         ++   + 
Sbjct: 6   GIQPSGI-LHIGNYFGAIKQFIDLQDEYEGFYFLADFHALTSLP-----DSESLKHNTMS 59

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETW-LCSIKYIDLLREIGSFFSVNRMLSFESV 159
             ++ +             ++D       +W L ++  I LL    S+         + V
Sbjct: 60  AILDYLACGLDPEKSTLFLQSDVPEHTELSWILSNVTPIGLLERGHSY--------KDKV 111

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-- 217
              +K    L    F Y +L A D +     YD  +   G DQ  ++    D+  +    
Sbjct: 112 SKGIKPNTGL----FTYPVLMAADILI----YDSDIVPVGKDQKQHLEMTRDIAIKFNEH 163

Query: 218 -TPKLFAL-------TSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQY-WRNI---- 264
              ++F L       T  ++    G KM K+    I     M  P    +    +I    
Sbjct: 164 YNKEVFKLPEEKILETLAVVPGIDGEKMSKSYKNII----NMFLPEKELKKQVMSIVTDS 219

Query: 265 --------DDADVVSFAKRLTTLPMSEIDRMA 288
                    D ++             EI  M 
Sbjct: 220 TPLEEPKNPDNNITKLYSLFA--SKEEIQAMK 249


>gi|26324732|dbj|BAC26120.1| unnamed protein product [Mus musculus]
          Length = 528

 Score = 51.7 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 43/230 (18%), Positives = 69/230 (30%), Gaps = 23/230 (10%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R    ++    +L  +  +  +  Y G   T    H  +   +  +    K G +  
Sbjct: 13  LITRNL-QEVLGEEKLKEILKERELKVYWGTATTGKP-HVAYFVPMSKIADFLKAGCEVT 70

Query: 72  SLMGGGTSII---GDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
            L     + +     P    E R       I+  +E I       +K+  G         
Sbjct: 71  ILFADLHAYLDNMKAPWELLELRTSYYENVIKAMLESIGVPLEK-LKFIKGTDYQ----- 124

Query: 129 ETWLCSIKYIDLLREIGSFFSV-NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
              L     +D+ R          +    E V+   + E  L      Y  LQA D   L
Sbjct: 125 ---LSKEYTLDVYRLSSVVTQHDAKKAGAEVVK---QVEHPL-LSGLLYPGLQALDEEYL 177

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
                   Q GG DQ             L   K   L +P++   +G+KM
Sbjct: 178 K----VDAQFGGVDQRKIFTFAEKYLPALGYSKRVHLMNPMVPGLTGSKM 223


>gi|165377181|ref|NP_598912.3| tyrosyl-tRNA synthetase, cytoplasmic [Mus musculus]
 gi|50401640|sp|Q91WQ3|SYYC_MOUSE RecName: Full=Tyrosyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Tyrosyl--tRNA ligase; Short=TyrRS
 gi|15488844|gb|AAH13552.1| Tyrosyl-tRNA synthetase [Mus musculus]
 gi|18381055|gb|AAH22143.1| Tyrosyl-tRNA synthetase [Mus musculus]
 gi|20072367|gb|AAH26615.1| Tyrosyl-tRNA synthetase [Mus musculus]
 gi|26335952|dbj|BAC31674.1| unnamed protein product [Mus musculus]
 gi|74207145|dbj|BAE30766.1| unnamed protein product [Mus musculus]
 gi|74208389|dbj|BAE26384.1| unnamed protein product [Mus musculus]
          Length = 528

 Score = 51.7 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 43/230 (18%), Positives = 69/230 (30%), Gaps = 23/230 (10%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R    ++    +L  +  +  +  Y G   T    H  +   +  +    K G +  
Sbjct: 13  LITRNL-QEVLGEEKLKEILKERELKVYWGTATTGKP-HVAYFVPMSKIADFLKAGCEVT 70

Query: 72  SLMGGGTSII---GDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
            L     + +     P    E R       I+  +E I       +K+  G         
Sbjct: 71  ILFADLHAYLDNMKAPWELLELRTSYYENVIKAMLESIGVPLEK-LKFIKGTDYQ----- 124

Query: 129 ETWLCSIKYIDLLREIGSFFSV-NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
              L     +D+ R          +    E V+   + E  L      Y  LQA D   L
Sbjct: 125 ---LSKEYTLDVYRLSSVVTQHDAKKAGAEVVK---QVEHPL-LSGLLYPGLQALDEEYL 177

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
                   Q GG DQ             L   K   L +P++   +G+KM
Sbjct: 178 K----VDAQFGGVDQRKIFTFAEKYLPALGYSKRVHLMNPMVPGLTGSKM 223


>gi|114765382|ref|ZP_01444497.1| RNA pseudouridylate synthase family protein [Pelagibaca bermudensis
           HTCC2601]
 gi|114542225|gb|EAU45255.1| RNA pseudouridylate synthase family protein [Roseovarius sp.
           HTCC2601]
          Length = 283

 Score = 51.7 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 12/53 (22%), Positives = 25/53 (47%), Gaps = 1/53 (1%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
           +   G  +  ++ +AG A S  EA R ++   + +N   I++  L +  +D  
Sbjct: 17  DTPPGDRIAKVLSRAGIA-SRREAERMIEEGRVTVNGETIASPALNVTDKDRI 68


>gi|74146625|dbj|BAE41320.1| unnamed protein product [Mus musculus]
          Length = 527

 Score = 51.7 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 43/230 (18%), Positives = 69/230 (30%), Gaps = 23/230 (10%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R    ++    +L  +  +  +  Y G   T    H  +   +  +    K G +  
Sbjct: 12  LITRNL-QEVLGEEKLKEILKERELKVYWGTATTGKP-HVAYFVPMSKIADFLKAGCEVT 69

Query: 72  SLMGGGTSII---GDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
            L     + +     P    E R       I+  +E I       +K+  G         
Sbjct: 70  ILFADLHAYLDNMKAPWELLELRTSYYENVIKAMLESIGVPLEK-LKFIKGTDYQ----- 123

Query: 129 ETWLCSIKYIDLLREIGSFFSV-NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
              L     +D+ R          +    E V+   + E  L      Y  LQA D   L
Sbjct: 124 ---LSKEYTLDVYRLSSVVTQHDAKKAGAEVVK---QVEHPL-LSGLLYPGLQALDEEYL 176

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
                   Q GG DQ             L   K   L +P++   +G+KM
Sbjct: 177 K----VDAQFGGVDQRKIFTFAEKYLPALGYSKRVHLMNPMVPGLTGSKM 222


>gi|147832996|emb|CAN66126.1| hypothetical protein VITISV_027725 [Vitis vinifera]
          Length = 399

 Score = 51.7 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 57/336 (16%), Positives = 98/336 (29%), Gaps = 53/336 (15%)

Query: 15  RGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +  E LD          Y G   ++ +LH GHL   M   +LQ     P+ +
Sbjct: 64  RGVFFAHRDLNEVLDAYERGDKFYLYTGRGPSSEALHLGHLVPFMFTKYLQDAFKVPLVI 123

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                      +   E  + +  +  ++ I     I  +FI             N     
Sbjct: 124 QLTDDEKCMWKNLSVEESQRLARENAKDIIACGFDISRTFIFSDFDYVGGAFYKN----- 178

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY-----DFVELA 188
                  + ++G   + N+++           E  +  + F    +QA       F  L 
Sbjct: 179 -------MVKVGKCVTYNKVVG--IFG--FTGEDHIGKVSF--PPVQAVPSFPSSFPHLF 225

Query: 189 KNYD---CRLQMGGSDQWGNIICGIDLGERLK-TPKLFA--LTSPLLTTASGTKMGKTLS 242
              D   C +     DQ        D+  R+          L  P L   +G KM  +  
Sbjct: 226 SGKDDLRCLIPC-AIDQDPYFRMTRDVAPRIGYHKPALIEXLFFPALQGETG-KMSASDP 283

Query: 243 G-AIWLN------KEMTSPYNFWQ----------YWRNIDDADVVSFAKRL--TTLPMSE 283
             AI++       K   + Y F            Y  N++    + +          +  
Sbjct: 284 NSAIYVTDSGKDIKNKINKYAFSGGQDSIENHRKYGANLEVDIPIKYLGFFLEDDAELEY 343

Query: 284 IDRMAKLQGKEINEAKKIIATEITTMV--HGREEAE 317
           I            + KK +   +T +V  H R  A 
Sbjct: 344 IRTEYGAGRMLTGDVKKRLIEVLTELVERHRRARAA 379


>gi|328785023|ref|XP_397348.4| PREDICTED: tyrosyl-tRNA synthetase, cytoplasmic isoform 1 [Apis
           mellifera]
          Length = 522

 Score = 51.7 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 42/234 (17%), Positives = 71/234 (30%), Gaps = 21/234 (8%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            L  R     + + + L  +  Q  +  Y G   T    H G+ T +  +    K+G + 
Sbjct: 11  ELITRNLAEWLGDEK-LKSILKQRDLKLYWGTATTGKP-HIGYFTPMSKIADFLKSGAEV 68

Query: 71  ISLMGGGTSII---GDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
             L     + +     P    E R     + I+  +  I       +K+  G        
Sbjct: 69  TILFADLHAYLDNMKAPWELLELRTQYYEKVIKAMLRSIDVPLEK-LKFVKGTDYQ---- 123

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
               L     +D+ R        +   +   V  ++            Y  LQA D   L
Sbjct: 124 ----LSKEYTLDVYRLSSIVTEHDAKKAGAEVVKQVVNPL---LSGLLYPGLQALDEQYL 176

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
                   Q GG DQ             L   K   L +P++   +G+KM  + 
Sbjct: 177 K----VDAQFGGIDQRKIFTFSEKYLPLLGYEKCIHLMNPMIPGLAGSKMSSSE 226


>gi|163740839|ref|ZP_02148232.1| RNA pseudouridylate synthase family protein [Phaeobacter
           gallaeciensis 2.10]
 gi|161385830|gb|EDQ10206.1| RNA pseudouridylate synthase family protein [Phaeobacter
           gallaeciensis 2.10]
          Length = 447

 Score = 51.7 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/65 (21%), Positives = 28/65 (43%), Gaps = 1/65 (1%)

Query: 330 SIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKL 389
           S  +   PT + +  +   G  +  ++ +AG   S  EA R +    + +N  +I +  L
Sbjct: 32  SAKAGKAPTDTPATGDGPEGDRIAKVLSRAG-VASRREAERMIAEGRVAVNGKVIDSPAL 90

Query: 390 QIKLQ 394
            + L 
Sbjct: 91  NVVLG 95


>gi|88856445|ref|ZP_01131103.1| tryptophanyl-tRNA synthetase [marine actinobacterium PHSC20C1]
 gi|88814312|gb|EAR24176.1| tryptophanyl-tRNA synthetase [marine actinobacterium PHSC20C1]
          Length = 336

 Score = 51.7 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 57/299 (19%), Positives = 102/299 (34%), Gaps = 51/299 (17%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   +A SLH G+    ++ +   +  +  +  +    + I  P        ++R+Q  +
Sbjct: 10  GMQPSADSLHVGNYIGALMQWREMQQNYDAVFCVVDMHA-ITVPQ----EPELLRAQTRR 64

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLS-FESV 159
              + I G  +        ++         W        +L  I  F   +RM    +  
Sbjct: 65  TAAQYIAGGINPEHSVLFVQSQVPAHAELAW--------VLNTITGFGEASRMTQFKDKS 116

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT- 218
             +     S+    F Y +L A D +     YD  +   G DQ  +I    DL  R  + 
Sbjct: 117 AKQGSDAASVGL--FTYPVLMAADILL----YDTAIVPVGEDQRQHIELTRDLATRFNSR 170

Query: 219 -PKLFALTSPLLTTASGT---------KMGKTL---SGAIWLNKEMTSPYNFWQYWRN-I 264
               F +  P +  A+           KM K+    +G +WL   +  P    +  ++ +
Sbjct: 171 FGDTFVMPEPQIQKATAKIYDLQNPESKMSKSATTDAGVLWL---LDEPSKTAKKIKSAV 227

Query: 265 DDAD------------VVSFAKR-LTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMV 310
            DAD            V +      T    S  D  A+ +GK   + KK +A  +T   
Sbjct: 228 TDADREIRFDRGAKPGVSNLLTLHSTFSGTSVADLEAQFEGKGYGDLKKEVAEVVTAEF 286


>gi|86135132|ref|ZP_01053714.1| Tryptophanyl-tRNA synthetase [Polaribacter sp. MED152]
 gi|85821995|gb|EAQ43142.1| Tryptophanyl-tRNA synthetase [Polaribacter sp. MED152]
          Length = 322

 Score = 51.7 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 52/321 (16%), Positives = 91/321 (28%), Gaps = 61/321 (19%)

Query: 50  HAGHLTQLML--LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIK 107
           H G+L   +L  +       ++    +    S+      +    R          +    
Sbjct: 15  HLGNLLGAILPAIEMANDPKNEAFLFIADMHSLTQIKDGKQL--RENTYSTAATWLACGL 72

Query: 108 GIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ 167
            I  +     +       L   +W            +  +F   R+    S + +  R  
Sbjct: 73  DINKTVFYRQSDIPQVTEL---SWY-----------LSCYFPYQRLTLAHSFKDKADRLS 118

Query: 168 SLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSP 227
            ++   F Y +L A D +     YD  +   G DQ  ++    D+  R        L +P
Sbjct: 119 DVNSGLFTYPMLMAADILL----YDAEIVPVGKDQLQHLEMTRDVANRFNHVVGETLVAP 174

Query: 228 ---------LLTTASGTKMGKTLSG--AIWLNKEMTSPYNFWQYWRNI-------DDAD- 268
                    L+    G KM K+      I+L  +            +         D D 
Sbjct: 175 KAKIQENTKLVPGTDGEKMSKSRENTINIFLTDKKLRKQIMGIKTDSTPLEEPKNPDTDN 234

Query: 269 VVSFAKRL-TTLPMSEIDRMAKLQGKEINEAKKIIATEITTMV--------------HGR 313
           V +  K L T   ++E+    +        AK+ +   I                  H  
Sbjct: 235 VFALYKLLATDTQITEMRANYEGGNYGYGHAKQALYEVIVEKFATIRERYHHYMNNQHEI 294

Query: 314 EE-----AEKAATAAMECFDM 329
           +E     AEKA   A E    
Sbjct: 295 DEALKLGAEKATETANEVLQR 315


>gi|170700922|ref|ZP_02891907.1| tryptophanyl-tRNA synthetase [Burkholderia ambifaria IOP40-10]
 gi|170134162|gb|EDT02505.1| tryptophanyl-tRNA synthetase [Burkholderia ambifaria IOP40-10]
          Length = 337

 Score = 51.4 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 51/341 (14%), Positives = 107/341 (31%), Gaps = 50/341 (14%)

Query: 45  TASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIE 104
           T   LH GH    +      +       L+    ++       +  RR   ++ + E   
Sbjct: 16  TGP-LHLGHYIGSLRARVQMQHEATQFLLLADTQALTD-----NMGRRQRVTENVIEVAL 69

Query: 105 KIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-L 163
               +           +  ++ +    L  +    LL  +            E +R R  
Sbjct: 70  DYLAVG-----IDPAISTIVVQSQVPELAELSQY-LLNLVTVARLERNPTIKEEIRLRGF 123

Query: 164 KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP---- 219
           +R+    FL   Y + QA D       +   + +G  DQ   I    +L  R        
Sbjct: 124 ERDIPAGFL--TYPVSQAADITAFKATH---VPVG-DDQLPMIEQTNELVRRFNATVDKP 177

Query: 220 -----KLFALTSPLLTTASGT-KMGKTLSGAIWL----NKEMTSPYNFWQ--YWRNIDDA 267
                +        L    G  KM K+L  AI L    ++   +  + +       + D 
Sbjct: 178 VLVECEAVLSAVTRLPGIDGKAKMSKSLGNAITLGSTPDEIAQAVKDMYTDPNHLRVSDP 237

Query: 268 DVVSFAKRLTTLP--------MSEIDRMAKLQGKEINEAKKIIATEITTMV------HGR 313
             V      T L         + E+    +  G   +  K+++   +  ++         
Sbjct: 238 GQVEGNIVFTFLDAFEPDVSKVDELKAHYRRGGLGDSVVKRVLNERLQALIEPIRTRRRE 297

Query: 314 EEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLT 354
            EA+KA   A+     ++H++ +   ++++ + + G+    
Sbjct: 298 FEADKAEVMAI-LKRGTLHAREVAGATLAEVKGAMGLTYFD 337


>gi|293399275|ref|ZP_06643440.1| tryptophanyl-tRNA synthetase [Neisseria gonorrhoeae F62]
 gi|291610689|gb|EFF39799.1| tryptophanyl-tRNA synthetase [Neisseria gonorrhoeae F62]
          Length = 336

 Score = 51.4 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 37/201 (18%), Positives = 57/201 (28%), Gaps = 42/201 (20%)

Query: 174 FNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSP------ 227
           F+Y IL   D +    N +  +   G DQ  ++    D+  R         T P      
Sbjct: 136 FSYPILMTADILMFNAN-EVPV---GRDQIQHVEMARDIAGRFNHRFQELFTLPEVKIDE 191

Query: 228 ---LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWR---------NIDDAD-VVSFAK 274
              LL    G KM K+    I L +                         D   +    K
Sbjct: 192 NVELLVGLDGRKMSKSYGNTIPLWENDKKTQKSVNKIITNMKEPGEPKQPDESPLFEIYK 251

Query: 275 RLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHG-------------------REE 315
             +T   +         G    EAKK++A +I   +                     +  
Sbjct: 252 AFSTPSETAEFTQMLADGLAWGEAKKLLAAKINAELAELRERYNALTSNPSQIEEILQAG 311

Query: 316 AEKAATAAMECFDMSIHSQHM 336
           A+KA   A E  D    +  +
Sbjct: 312 AQKARKEARELLDKVRDAVGI 332


>gi|239943728|ref|ZP_04695665.1| tryptophanyl-tRNA synthetase [Streptomyces roseosporus NRRL 15998]
 gi|239990177|ref|ZP_04710841.1| tryptophanyl-tRNA synthetase [Streptomyces roseosporus NRRL 11379]
 gi|291447188|ref|ZP_06586578.1| tryptophanyl-tRNA synthetase 1 [Streptomyces roseosporus NRRL
           15998]
 gi|291350135|gb|EFE77039.1| tryptophanyl-tRNA synthetase 1 [Streptomyces roseosporus NRRL
           15998]
          Length = 355

 Score = 51.4 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 52/296 (17%), Positives = 90/296 (30%), Gaps = 45/296 (15%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   TA S H G+    +  +   +  H    ++    + I  P    E R   R    Q
Sbjct: 29  GIQPTAGSFHLGNYLGAVRQWVALQESHDAFYMVVDLHA-ITVPQDPAELRANTRLAVAQ 87

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLS-FESV 159
                +     +          A +     W        ++  +  F   +RM    +  
Sbjct: 88  LLAAGLDPERCTLFVQSHVPEHAQL----GW--------VMNCLTGFGEASRMTQFKDKS 135

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             +     ++    F Y +LQ  D + L +     +   G DQ  +I    DL ER    
Sbjct: 136 AKQGADRATVGL--FTYPVLQVADIL-LYQANQVPV---GEDQRQHIELTRDLAERFNGR 189

Query: 220 KLFALTSPLL-----------TTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRN-IDDA 267
                T P                   KM K+ S    L   +  P    +  ++ + D 
Sbjct: 190 YGQTFTVPAPYILKETAKIFDLQDPAVKMSKSASTPKGLINLLDDPKVTAKKVKSAVTDT 249

Query: 268 D------------VVSFAKRLTTLPMSEIDRMAKL-QGKEINEAKKIIATEITTMV 310
           D            V +    L+TL  S ++ + +  +GK     K  +A  +   V
Sbjct: 250 DTVIRFDEEKKPGVSNLLTILSTLSGSSVEDLERSYEGKGYGALKTDLAEAMVEFV 305


>gi|222823545|ref|YP_002575119.1| tryptophanyl-tRNA synthetase [Campylobacter lari RM2100]
 gi|222538767|gb|ACM63868.1| tryptophanyl-tRNA synthetase [Campylobacter lari RM2100]
          Length = 319

 Score = 51.4 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 31/215 (14%), Positives = 64/215 (29%), Gaps = 32/215 (14%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   +   LH G+    +      +  ++    +    ++  + +     +  +      
Sbjct: 6   GLQPSGD-LHIGNYFGSIKQMLNMQEKNQMYMFIANYHAMTSNFNGEKLRQNSL-KAAAA 63

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETW-LCSIKYIDLLREIGSFFSVNRMLSFESV 159
                I    S F      K    +     W L     + LL    S+         + +
Sbjct: 64  FLSLGIDPQKSVFWLQSDVKEVMELY----WILSQFTPMGLLERAHSY--------KDKI 111

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
              L     L    F+Y +L A D +     ++ ++   G DQ  ++    D+  ++   
Sbjct: 112 AKGLNANHGL----FSYPVLMAADILL----FNAQMVPVGKDQIQHVEIARDIALKVNNE 163

Query: 220 KLFALTSP---------LLTTASGTKMGKTLSGAI 245
                T P         ++    G KM K+    I
Sbjct: 164 WGEIFTLPQAKVNDEVAVVPGTDGAKMSKSYQNTI 198


>gi|149236750|ref|XP_001524252.1| tyrosyl-tRNA synthetase [Lodderomyces elongisporus NRRL YB-4239]
 gi|146451787|gb|EDK46043.1| tyrosyl-tRNA synthetase [Lodderomyces elongisporus NRRL YB-4239]
          Length = 428

 Score = 51.4 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 37/250 (14%), Positives = 80/250 (32%), Gaps = 24/250 (9%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQG--VVTAYIGYDLTASSLHAGHLTQLM 58
           M +  S     L  +G   ++ N + +  +  +    V  Y G   T    H G+   ++
Sbjct: 1   MASLSSQEQYDLITKGL-QEVLNGQIIKDVLEKEQRPVKIYWGTAPTGKP-HCGYFVPMV 58

Query: 59  LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT 118
            L    K G +   L+    + + +             + +Q   +  + +  + ++   
Sbjct: 59  KLAHFLKAGCEVTVLLADLHAFLDNMKA--------SLEVVQYRAKYYEYVVKAILRSIN 110

Query: 119 ---GKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFN 175
               K   ++ ++         +DL +        +   +   V  ++            
Sbjct: 111 VPIEKLKFVIGSSYQ-QDGPYIMDLFKMSNVVSQNDAKRAGADVVKQVANPL---LSGLI 166

Query: 176 YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTAS-G 234
           Y ++QA D   L        Q GG DQ    +   +    L   K   L +P++     G
Sbjct: 167 YPLMQAIDEEHLK----VDAQFGGVDQRKIFVLAEENLPSLGYKKRAHLMNPMVPGLGQG 222

Query: 235 TKMGKTLSGA 244
            KM  +   +
Sbjct: 223 GKMSASDPNS 232


>gi|313668137|ref|YP_004048421.1| tryptophanyl-tRNA synthetase [Neisseria lactamica ST-640]
 gi|313005599|emb|CBN87036.1| tryptophanyl-tRNA synthetase [Neisseria lactamica 020-06]
          Length = 336

 Score = 51.4 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 40/218 (18%), Positives = 61/218 (27%), Gaps = 49/218 (22%)

Query: 174 FNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSP------ 227
           F+Y IL   D +    N +  +   G DQ  ++    D+  R         T P      
Sbjct: 136 FSYPILMTADILMFNAN-EVPV---GRDQIQHVEMARDIAGRFNHRFQELFTLPEVKIDE 191

Query: 228 ---LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWR---------NIDDAD-VVSFAK 274
              LL    G KM K+    I L +                         D   +    K
Sbjct: 192 NVELLVGLDGRKMSKSYGNTIPLWENDKKTQKSVNKIITNMKEPGEPKQPDESPLFEIYK 251

Query: 275 RLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQ 334
             +T   +         G    EAKK++A +I        E  +      E    +    
Sbjct: 252 AFSTPSETVEFTKMLADGLAWGEAKKLLAAKINA------ELAEPRERYNEL---TADPS 302

Query: 335 HMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHL 372
            +  I                 ++AG   +  EAR  L
Sbjct: 303 QIEEI-----------------LQAGAQKARKEARELL 323


>gi|260574583|ref|ZP_05842586.1| RNA-binding S4 domain protein [Rhodobacter sp. SW2]
 gi|259023000|gb|EEW26293.1| RNA-binding S4 domain protein [Rhodobacter sp. SW2]
          Length = 358

 Score = 51.4 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 28/61 (45%), Gaps = 1/61 (1%)

Query: 337 PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
           P     K  +  G  +  ++ +AG A S  EA R ++   + +N  +I++  L +  +D 
Sbjct: 5   PKKPAPKPALPEGDRIAKVLSRAGIA-SRREAERMIELGQVAVNGKVITSPALNVTAKDR 63

Query: 397 D 397
            
Sbjct: 64  I 64


>gi|149024033|gb|EDL80530.1| tyrosyl-tRNA synthetase [Rattus norvegicus]
          Length = 564

 Score = 51.4 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 43/230 (18%), Positives = 69/230 (30%), Gaps = 23/230 (10%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R    ++    +L  +  +  +  Y G   T    H  +   +  +    K G +  
Sbjct: 49  LITRNL-QEVLGEEKLKEILKERELKVYWGTATTGKP-HVAYFVPMSKIADFLKAGCEVT 106

Query: 72  SLMGGGTSII---GDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
            L     + +     P    E R       I+  +E I       +K+  G         
Sbjct: 107 ILFADLHAYLDNMKAPWELLELRTSYYENVIKAMLESIGVPLEK-LKFTKGTDYQ----- 160

Query: 129 ETWLCSIKYIDLLREIGSFFSV-NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
              L     +D+ R          +    E V+   + E  L      Y  LQA D   L
Sbjct: 161 ---LSKEYTLDVYRLSSLVTQHDAKKAGAEVVK---QVEHPL-LSGLLYPGLQALDEEYL 213

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
                   Q GG DQ             L   K   L +P++   +G+KM
Sbjct: 214 K----VDAQFGGIDQRKIFTFAEKYLPTLGYSKRVHLMNPMVPGLTGSKM 259


>gi|332969777|gb|EGK08788.1| tryptophan--tRNA ligase [Psychrobacter sp. 1501(2011)]
          Length = 361

 Score = 51.4 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 35/174 (20%), Positives = 55/174 (31%), Gaps = 32/174 (18%)

Query: 164 KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFA 223
             + +++   F Y +L A D +     +   + +G  DQ  ++    D+           
Sbjct: 141 DADHNVTMGLFGYPVLMAADILMFNATH---VPVG-RDQIQHVEMARDIAGTFNHKYKPL 196

Query: 224 LTSP---------LLTTASGTKMGKTLSGAIWL--------NKEMTSPYNFWQYWRNI-- 264
            T P         LLT   G KM K+    I L        + E        Q   N   
Sbjct: 197 FTLPSAVVDDNVALLTGLDGRKMSKSYGNTIPLFGDGNPQVDPEKQLRKAIMQIVTNSQA 256

Query: 265 ------DDADVVSFAKRLTTLPMSEID--RMAKLQGKEINEAKKIIATEITTMV 310
                  D  VV F         +EI   R     G    +AK+I+  +I   +
Sbjct: 257 PEDPKNPDDSVV-FEIYKAFATPAEIADLRGQFEAGIAWGDAKQILFEKINDEI 309


>gi|154274950|ref|XP_001538326.1| tyrosyl-tRNA synthetase [Ajellomyces capsulatus NAm1]
 gi|150414766|gb|EDN10128.1| tyrosyl-tRNA synthetase [Ajellomyces capsulatus NAm1]
          Length = 399

 Score = 51.4 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 43/216 (19%), Positives = 64/216 (29%), Gaps = 22/216 (10%)

Query: 29  ILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSII---GDPS 85
           IL     +  Y G   T    H G+   ++ L    + G     L+      +     P 
Sbjct: 31  ILRQNRPLKVYFGTATTGRP-HCGYFCPIVKLAHFLRAGCHVKILLADIHGFLDNLKAPI 89

Query: 86  FRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIG 145
                R       I   +E I                         L S   +DL R   
Sbjct: 90  DLVNFRAKYYRYVITALLEAIHVPIDKLEFVLGSDYQ---------LSSRYTMDLFRLSS 140

Query: 146 SFFSV-NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWG 204
                  +    E V+        LS L   Y ++QA D   L    D   Q GG DQ  
Sbjct: 141 VVTEHDAKKAGAEVVKQ--VDNAPLSGL--IYPLMQALDEEHL----DVDAQFGGVDQRK 192

Query: 205 NIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
                ++   R+   +   L SP++   +G KM  +
Sbjct: 193 IFTLALETLPRVGYKERAHLMSPMVPGLAGGKMSAS 228


>gi|167724752|ref|ZP_02407988.1| tryptophanyl-tRNA synthetase II [Burkholderia pseudomallei DM98]
 gi|167899316|ref|ZP_02486717.1| tryptophanyl-tRNA synthetase II [Burkholderia pseudomallei 7894]
 gi|167915992|ref|ZP_02503083.1| tryptophanyl-tRNA synthetase II [Burkholderia pseudomallei 112]
 gi|167923836|ref|ZP_02510927.1| tryptophanyl-tRNA synthetase II [Burkholderia pseudomallei BCC215]
 gi|254184802|ref|ZP_04891391.1| tryptophanyl-tRNA synthetase [Burkholderia pseudomallei 1655]
 gi|184215394|gb|EDU12375.1| tryptophanyl-tRNA synthetase [Burkholderia pseudomallei 1655]
          Length = 346

 Score = 51.4 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 45/293 (15%), Positives = 90/293 (30%), Gaps = 45/293 (15%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
            T + LH GH    +      +  H+   L+    ++  +    D+ RR      + E  
Sbjct: 20  PTGA-LHLGHYIGSLKTRIALQDTHRQFILVADTQALTDNAHDPDKVRR-----NVIEVA 73

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR- 162
                +          ++   + +    L  +     L  +            + + +R 
Sbjct: 74  LDYLAVG-----IDPRRSTIAVQSGLPALAELTLF-YLNFVTVARLERNPTIKDEIHARG 127

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT---- 218
             R+    FL   Y + QA D      +    + +G  DQ   I    ++  R+      
Sbjct: 128 FGRDIPAGFL--CYPVAQAADITAFKAD---TVPVG-DDQLPLIEQTNEIVRRVNRQAGA 181

Query: 219 ---PKLFALTSPL--LTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYW------RNIDD 266
              P+  AL SP   L    G TKM K+   AI L+    +  +  +          + D
Sbjct: 182 DVLPEASALISPTGRLPGVDGKTKMSKSQGNAIALSSSPDAIADAVRRMYTDPNHLRVSD 241

Query: 267 ------ADVVSFAKRLTTLPMSEIDRMAKLQGKEI---NEAKKIIATEITTMV 310
                   V ++          E++R+              K+ +   +  ++
Sbjct: 242 PGTVEGNVVFTYLDAF-DGEPDELERLKAAYRAGGLGDMVLKRRLEDRLQALI 293


>gi|320009846|gb|ADW04696.1| tryptophanyl-tRNA synthetase [Streptomyces flavogriseus ATCC 33331]
          Length = 352

 Score = 51.4 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 44/245 (17%), Positives = 78/245 (31%), Gaps = 36/245 (14%)

Query: 22  SNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQ-LMLLFWLQKTGHKPISLMGGGTSI 80
           S   E  +    G      G   T + LH GH    L     LQ  G     L+      
Sbjct: 16  SAELEAQLARDPGRFRVLTGDRPTGA-LHLGHYFGTLHNRVRLQDLGVDVFVLIADY--- 71

Query: 81  IGDPSFRDESRRMMRSQEIQENI-EKIKGIFSSFIKYGTGKTDALMLNNETWLC-SIKYI 138
                      +++  +++ E + E ++G+   ++  G     A + N+      +   +
Sbjct: 72  -----------QVLTDRDVAERLNEHVEGLLLDYLAIGIDPARATVFNHSAVPALNQLLL 120

Query: 139 DLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMG 198
             L  +            + +     R+ ++S L + Y + QA D +    N    L   
Sbjct: 121 PFLSLVSVAELGRNPTVKDEIA--HSRQSAVSGLMYTYPVHQAADILFCKGN----LVPV 174

Query: 199 GSDQWGNIICGIDLGERLKTPKLFALTSP----------LLTTASGTKMGKTLSGAIWLN 248
           G DQ  ++     +  R      +    P          LL     TKM K+   AI L 
Sbjct: 175 GQDQLPHLELTRTVARRFNER--YGNVFPEPDALLSAAPLLLGTDATKMSKSRGNAIALG 232

Query: 249 KEMTS 253
            +   
Sbjct: 233 ADADE 237


>gi|27262254|gb|AAN87408.1| Tryptophanyl-tRNA synthetase [Heliobacillus mobilis]
          Length = 333

 Score = 51.4 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 47/298 (15%), Positives = 91/298 (30%), Gaps = 59/298 (19%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGG---TSIIGDPSFRDESRRMMRSQ 97
           G   T   LH GHL+ L     LQ+  +  +  +      T+   D     +  R +   
Sbjct: 9   GMRPTGR-LHIGHLSVLENWVRLQEE-YDCVFGVVDWHALTTSFEDVQSLQQRIREIALD 66

Query: 98  EIQENIE---KIKGIFSSFIKYGTGKTDALMLNNETWLCS-IKYIDLLREIGSFFSVNRM 153
            +   ++       + S   ++        M+   +WL     Y D +++ G        
Sbjct: 67  WLSAGLDPEKCDIMVQSQVKEHAELHLLFSMMTPVSWLERCPTYKDQIQQFGLQ------ 120

Query: 154 LSFESVRSRLKREQSLSFLEFN-YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGID- 211
                        + ++   F  Y +L + D + L       +   G DQ  ++    + 
Sbjct: 121 ------------GKEINMYGFLGYPLLMSADIL-LYLATHVPV---GQDQIPHVEISREV 164

Query: 212 -------LGERLKTPKLFALT-SPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
                    + +       L+  PLL      KM K+    I L     SP    +  R 
Sbjct: 165 ARRFNFMYQKEVFPEPQVLLSEVPLLPGVDNRKMSKSYGNDISLTA---SPEEIKEKVRL 221

Query: 264 I--------------DDADVV-SFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           +               D  VV ++ K    + +  I    +         K+ +A ++
Sbjct: 222 MITDPGRVRKTDLGNPDVCVVHTYHKIYNDVEVEGIASDCRKADIGCVACKQRLAAKL 279


>gi|262066090|ref|ZP_06025702.1| tryptophan--tRNA ligase [Fusobacterium periodonticum ATCC 33693]
 gi|291380185|gb|EFE87703.1| tryptophan--tRNA ligase [Fusobacterium periodonticum ATCC 33693]
          Length = 325

 Score = 51.4 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 46/336 (13%), Positives = 103/336 (30%), Gaps = 41/336 (12%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   +   LH G+    M  F   ++ +     +    S+            +   + ++
Sbjct: 7   GIQPSGI-LHIGNYFGAMKQFVDLQSDYDGFYFIADYHSLTS----------LTSPETLR 55

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           EN   I  +    I     K+   + +N      + ++     + +   +  +    S +
Sbjct: 56  ENTYNIV-LDYLAIGLDPSKSTIFLQSNVPEHTELTWL-----LSNITPIGLLERGHSYK 109

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP- 219
            +  +    +     Y +L A D +     YD  L   G DQ  ++    D+  +     
Sbjct: 110 DKTAKGIPANTGLLTYPVLMAADILI----YDSDLVPVGKDQKQHLEMTRDIAMKFNQQY 165

Query: 220 --KLFALTSPLLT-------TASGTKMGKTLSGAI--WLNKEMTSPYNFWQYWRNI---- 264
             + F L  PL+           G KM K+ +  I  ++ K+            +     
Sbjct: 166 GVEFFKLPEPLILDDSAIVPGTDGQKMSKSYNNTINMFVTKKKLKEQVMSIVTDSTPLEE 225

Query: 265 ---DDADVVSFAKRLTTLPMS-EIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAA 320
               D ++         +    E+             AK  +   I        E  +A 
Sbjct: 226 PKNPDNNIAKLYALFNNIDKQNELKEKFLAGNFGYGHAKTELLNSILEHFAVAREKREAL 285

Query: 321 TAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLI 356
              M+     ++       +I+ ++V +   ++ L+
Sbjct: 286 EKDMDYVKDVLNEGSKKARAIAIEKVQKAKEIVGLV 321


>gi|307195560|gb|EFN77433.1| Tyrosyl-tRNA synthetase, cytoplasmic [Harpegnathos saltator]
          Length = 402

 Score = 51.4 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 40/234 (17%), Positives = 70/234 (29%), Gaps = 21/234 (8%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            L  R     + + + L  +  +  +  Y G   T    H G+   +  +    + G + 
Sbjct: 10  ELITRNLAEWLGDEK-LKSILKERDLKLYWGTATTGKP-HIGYFAPMSKIADFLRGGAEV 67

Query: 71  ISLMGGGTSII---GDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           I L     + +     P    E R       I+  ++ I     + +K+  G        
Sbjct: 68  IILFADLHAYLDNMKAPWELLELRTQYYEAVIKAMLKSINVPLDN-LKFVKGTDYQ---- 122

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
               L     +D+ R        +   +   V  ++            Y  LQA D   L
Sbjct: 123 ----LTKEYTLDVYRLSSIITEHDAKKAGAEVVKQVANPL---LSGLLYPGLQALDEQHL 175

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
                   Q GG DQ             L   K   L +P++   +G KM  + 
Sbjct: 176 ----QVDAQFGGIDQRKIFTFAEKYLPMLGYDKRVHLMNPMIPGLAGAKMSSSE 225


>gi|322795683|gb|EFZ18362.1| hypothetical protein SINV_05189 [Solenopsis invicta]
          Length = 415

 Score = 51.4 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 62/346 (17%), Positives = 102/346 (29%), Gaps = 70/346 (20%)

Query: 15  RGFIHQISNPRELDILCSQGV-VTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +   +  L  QG     Y G   +  ++H GHL   M   WLQ     P+ +
Sbjct: 77  RGIFFSHRDMHTILNLYEQGQYFYLYTGRGPSTDAMHLGHLIPFMFCKWLQDVFDVPLVI 136

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                      + + E    +     ++ I        +FI          + NN  +  
Sbjct: 137 QLTDDEKAIWKNIKIEDAIKLAYANARDIIACGFKPEKTFI----FSNLEHIGNNSAFYQ 192

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA-------YDFVE 186
           ++              + R ++F  V+       S    +  +   QA       + F+ 
Sbjct: 193 NM------------IRIQRCVTFNQVKGIFGFGDSDPIAKIAFPPTQAAPAISGSFPFIF 240

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTASGTKMGKT-LS 242
                 C +     DQ        D+  +L  PK   L A   P L  +  TKM  +  S
Sbjct: 241 KNAKVHCLIPC-AIDQDPYFRMTRDVAPKLGFPKPALLHATFFPALQGSK-TKMSASDNS 298

Query: 243 GAIWLNK-------------------------------EMTSPYNFWQYWRNIDDADVVS 271
            AI+L                                 E+   Y + +++   DD  +  
Sbjct: 299 TAIFLTDTAKQIKNKINKHAFSGGQATVEEHRQLGGNCEVDISYQWLRFFLE-DDERLEQ 357

Query: 272 FAKRLT-------TLPMSEIDRMAKLQGKEINEAKKIIATEITTMV 310
             K  T        L    ID + +L      EAK  I  E+    
Sbjct: 358 IRKGYTSGEILTGELKKELIDVLQRLVATH-QEAKSKITDEVIKQF 402


>gi|282859008|ref|ZP_06268144.1| tryptophan--tRNA ligase [Prevotella bivia JCVIHMP010]
 gi|282588176|gb|EFB93345.1| tryptophan--tRNA ligase [Prevotella bivia JCVIHMP010]
          Length = 362

 Score = 51.4 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 57/382 (14%), Positives = 103/382 (26%), Gaps = 93/382 (24%)

Query: 44  LTASSLHAGHLTQLMLLFW---LQKTGH--KPISLMGGGTSIIGDPSFRDESRRMMRSQE 98
            T   LH GH      L     LQ  G   K    M    ++  +    ++ R+      
Sbjct: 11  PTGK-LHLGHYIG--SLRRRVELQNLGDYDKMFVFMADVQALTDNADNPEKIRQ-----N 62

Query: 99  IQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
           I E       +          K    + +    L  +     +  I              
Sbjct: 63  IIEVALDYLSVG-----LDPEKCVLYIQSMIPELAELTTY-FMNLITVSRVQRNPTVKTE 116

Query: 159 VRSR-LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK 217
           ++ R  +    + F  F Y + QA D   +A      +  G  DQ   I    ++  R  
Sbjct: 117 IKMRNFEANIPMGF--FAYPVSQAAD---IAAFKGTTVPAG-EDQEPMIEVTREIVRRFN 170

Query: 218 TP------------KLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWR--- 262
                            A    L  T    KM K+L   I+L+ +  +    WQ  R   
Sbjct: 171 QVYSPVLVEPTIMLPQNATARRLPGTDGKEKMSKSLGNCIYLSDDADT---VWQKVRGMY 227

Query: 263 ------NIDD------ADVVSFAKRLT-----------TLPMSEIDRMAKLQGKEINEAK 299
                 N+ D        V ++    +              + E+       G    + K
Sbjct: 228 TDPTHVNVSDPGHVEGNAVFTYLDAFSTDEDFAEFWPEFANLEELKAAYSAGGIGDMKCK 287

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI--------SISKDEVSRGMG 351
           K++ + +  M+                       Q +P +         +++ E ++ M 
Sbjct: 288 KLLNSVLNKMLDP------------IRVRRHEFEQDIPEVYNILKKGSDVARAEAAKTMD 335

Query: 352 LLTL------IVKAGFATSTNE 367
            +           A    S +E
Sbjct: 336 EVRAAMQINYFHDAELIRSQSE 357


>gi|217422230|ref|ZP_03453733.1| tryptophan--tRNA ligase [Burkholderia pseudomallei 576]
 gi|254193766|ref|ZP_04900198.1| tryptophanyl-tRNA synthetase [Burkholderia pseudomallei S13]
 gi|169650517|gb|EDS83210.1| tryptophanyl-tRNA synthetase [Burkholderia pseudomallei S13]
 gi|217394461|gb|EEC34480.1| tryptophan--tRNA ligase [Burkholderia pseudomallei 576]
          Length = 346

 Score = 51.4 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 45/293 (15%), Positives = 90/293 (30%), Gaps = 45/293 (15%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
            T + LH GH    +      +  H+   L+    ++  +    D+ RR      + E  
Sbjct: 20  PTGA-LHLGHYIGSLKTRIALQDTHRQFILVADTQALTDNAHDPDKVRR-----NVIEVA 73

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR- 162
                +          ++   + +    L  +     L  +            + + +R 
Sbjct: 74  LDYLAVG-----IDPRRSTIAVQSGLPALAELTLF-YLNFVTVARLERNPTIKDEIHARG 127

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT---- 218
             R+    FL   Y + QA D      +    + +G  DQ   I    ++  R+      
Sbjct: 128 FGRDIPAGFL--CYPVAQAADITAFKAD---TVPVG-DDQLPLIEQTNEIVRRVNRQAGA 181

Query: 219 ---PKLFALTSPL--LTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYW------RNIDD 266
              P+  AL SP   L    G TKM K+   AI L+    +  +  +          + D
Sbjct: 182 DVLPEASALISPTGRLPGVDGKTKMSKSQGNAIALSSSPDAIADAVRRMYTDPNHLRVSD 241

Query: 267 ------ADVVSFAKRLTTLPMSEIDRMAKLQGKEI---NEAKKIIATEITTMV 310
                   V ++          E++R+              K+ +   +  ++
Sbjct: 242 PGTVEGNVVFTYLDAF-DGEPDELERLKAAYRAGGLGDMVLKRRLEDRLQALI 293


>gi|161529259|ref|YP_001583085.1| tyrosyl-tRNA synthetase [Nitrosopumilus maritimus SCM1]
 gi|160340560|gb|ABX13647.1| tyrosyl-tRNA synthetase [Nitrosopumilus maritimus SCM1]
          Length = 348

 Score = 51.4 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 41/248 (16%), Positives = 81/248 (32%), Gaps = 33/248 (13%)

Query: 11  ILSERGFIHQISNPRELDILC-SQGVVTAYIGYDLTASSLHAGHLTQL-MLLFWLQKTGH 68
            L ER    ++    EL  L  +      YIG +++   LH G L      +    K G 
Sbjct: 8   DLIERPPTEEVVTRDELTELFKTNSSPKHYIGLEISG-FLHLGSLISTGFKINDFAKAGV 66

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           K    +    ++I D             + I +  +  +  F           DA ++  
Sbjct: 67  KCTIFLADWHTLINDKLGG-------NWETISKVSKYYQDAFKLVC------PDAEIILG 113

Query: 129 ETWLCSIK--YIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
                     + +L++      S+ R +   ++  R + E+ +   +  Y  +QA D   
Sbjct: 114 SKLYEEKTEYWSELVK-FTKHMSLARTMRTLTIMGRSENEEKIDVAKLLYPAMQAVDIHS 172

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDL---GERLKTPKLFALTSPLLTTASGT-------K 236
           L    +  +   G DQ    +   ++    +      +     P L+  + T       K
Sbjct: 173 L----EVDIAHAGMDQRKIHMLVREIFPKMKWKVPVAVHHKLLPGLSKPADTSDSQVLGK 228

Query: 237 MGKTLSGA 244
           M K+   +
Sbjct: 229 MSKSDPNS 236


>gi|309378341|emb|CBX23038.1| unnamed protein product [Neisseria lactamica Y92-1009]
          Length = 336

 Score = 51.4 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 31/154 (20%), Positives = 47/154 (30%), Gaps = 23/154 (14%)

Query: 174 FNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSP------ 227
           F+Y IL   D +    N +  +   G DQ  ++    D+  R         T P      
Sbjct: 136 FSYPILMTADILMFNAN-EVPV---GRDQIQHVEMARDIAGRFNHRFQELFTLPEVKIDE 191

Query: 228 ---LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWR---------NIDDAD-VVSFAK 274
              LL    G KM K+    I L +                         D   +    K
Sbjct: 192 NVELLVGLDGRKMSKSYGNTIPLWENDKKTQKSVNKIITNMKEPGEPKQPDESPLFEIYK 251

Query: 275 RLTTLPMSEIDRMAKLQGKEINEAKKIIATEITT 308
             +T   +        +G    EAKK++A +I  
Sbjct: 252 AFSTPSETAAFTQMLSEGLAWGEAKKLLAAKINA 285


>gi|300172637|ref|YP_003771802.1| tryptophanyl-tRNA synthetase [Leuconostoc gasicomitatum LMG 18811]
 gi|299887015|emb|CBL90983.1| Tryptophanyl-tRNA synthetase [Leuconostoc gasicomitatum LMG 18811]
          Length = 338

 Score = 51.4 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 49/342 (14%), Positives = 98/342 (28%), Gaps = 52/342 (15%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     +Q +G   P  ++    +      F D +R      E   
Sbjct: 12  PTGK-LHIGHYIGSLKNRVQMQNSGQFDPFVMIADTQA------FTDNARNP----EKIH 60

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIG-SFFSVNRMLSFESVR 160
                  +    +     KT   + +    L  +     +  +  +    N  +  E  +
Sbjct: 61  QALTEVALDYLAVGIDPKKTTIFVQSQIKGLFELTEY-FMNLVSVARLQRNPTVKSEISQ 119

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP- 219
                     FL   Y + QA D + + +     +   G DQ   +    +L        
Sbjct: 120 KGFGEGIPAGFL--TYPVSQAAD-IAIFRATKVPV---GDDQEPMLEQTRELVRSFNHAY 173

Query: 220 ------KLFALTSPL----LTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYW------R 262
                 +   +  P     L    G  KM K+L   I+++ +  +     +         
Sbjct: 174 HSDVLVEPVGVFPPKGQGRLPGIDGNAKMSKSLGNGIYISDDTDTMAKKVKAMYTDPLHI 233

Query: 263 NIDD------ADVVSFAKRL-TTL-PMSEIDRMAKLQGKEINEAKKII-----ATEITTM 309
           NI D        V ++     T    + ++       G    + KK +     A      
Sbjct: 234 NISDPGHVEGNIVFTYLDIFDTDKQHVQDLKDQYTAGGLGDMKLKKYLIEVMEAEMAPIR 293

Query: 310 VHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMG 351
           V  +E A+          + S  +  +   ++     + G+ 
Sbjct: 294 VRRQEYAQDIPAVLRMLQEGSNRANVIAEETMKDVRHAMGID 335


>gi|71043618|ref|NP_001020867.1| tyrosyl-tRNA synthetase, cytoplasmic [Rattus norvegicus]
 gi|108860969|sp|Q4KM49|SYYC_RAT RecName: Full=Tyrosyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Tyrosyl--tRNA ligase; Short=TyrRS
 gi|68534287|gb|AAH98795.1| Tyrosyl-tRNA synthetase [Rattus norvegicus]
          Length = 528

 Score = 51.4 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 43/230 (18%), Positives = 69/230 (30%), Gaps = 23/230 (10%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R    ++    +L  +  +  +  Y G   T    H  +   +  +    K G +  
Sbjct: 13  LITRNL-QEVLGEEKLKEILKERELKVYWGTATTGKP-HVAYFVPMSKIADFLKAGCEVT 70

Query: 72  SLMGGGTSII---GDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
            L     + +     P    E R       I+  +E I       +K+  G         
Sbjct: 71  ILFADLHAYLDNMKAPWELLELRTSYYENVIKAMLESIGVPLEK-LKFTKGTDYQ----- 124

Query: 129 ETWLCSIKYIDLLREIGSFFSV-NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
              L     +D+ R          +    E V+   + E  L      Y  LQA D   L
Sbjct: 125 ---LSKEYTLDVYRLSSLVTQHDAKKAGAEVVK---QVEHPL-LSGLLYPGLQALDEEYL 177

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
                   Q GG DQ             L   K   L +P++   +G+KM
Sbjct: 178 K----VDAQFGGIDQRKIFTFAEKYLPTLGYSKRVHLMNPMVPGLTGSKM 223


>gi|110679275|ref|YP_682282.1| RNA pseudouridylate synthase family protein, putative [Roseobacter
           denitrificans OCh 114]
 gi|109455391|gb|ABG31596.1| RNA pseudouridylate synthase family protein, putative [Roseobacter
           denitrificans OCh 114]
          Length = 285

 Score = 51.4 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 29/55 (52%), Gaps = 1/55 (1%)

Query: 341 ISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           ++ +   +G  +  ++ +AG   S  EA R +++  +K+N   IS+  L ++  D
Sbjct: 1   MTSELTPQGDRIAKVLSRAG-VASRREAERMIEAGRVKVNGKPISSPALNVQASD 54


>gi|328767591|gb|EGF77640.1| hypothetical protein BATDEDRAFT_35960 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 425

 Score = 51.0 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 44/248 (17%), Positives = 84/248 (33%), Gaps = 32/248 (12%)

Query: 15  RGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG           LD          Y G   ++ S+H GH+   +   WLQ     P+ +
Sbjct: 78  RGLFFSHRELNLILDKYEQGKPFYLYTGRGPSSGSMHVGHMVPFIFCKWLQDVFKAPLVV 137

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQ-EIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL 132
                         D+ + +     +I+++   +       + +G       + +N  ++
Sbjct: 138 -----------QLTDDEKFLFTPDRKIEDSRVFMIENAKDIMSFGFDPERTFIFSNLEYM 186

Query: 133 CSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY- 191
           C   Y ++++ I    + +  +S  +         ++  L F   +  A  F     +  
Sbjct: 187 CPPFYQNIVK-ISKTITAS--VSRATFG--FTDSDNVGKLHFV-SVQAAPSFSNTFPHIF 240

Query: 192 ------DCRLQMGGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTASGTKMGKTLS 242
                  C +     DQ        D+  +LK PK   + A   P L    GTKM  +  
Sbjct: 241 GPKGDVPCLIPC-AIDQDPYFRLTRDVASKLKYPKPALIHAKFFPALQGP-GTKMSASNP 298

Query: 243 G-AIWLNK 249
             AI++N 
Sbjct: 299 NSAIYIND 306


>gi|84686243|ref|ZP_01014138.1| RNA pseudouridylate synthase family protein [Maritimibacter
           alkaliphilus HTCC2654]
 gi|84665770|gb|EAQ12245.1| RNA pseudouridylate synthase family protein [Rhodobacterales
           bacterium HTCC2654]
          Length = 293

 Score = 51.0 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 13/61 (21%), Positives = 28/61 (45%), Gaps = 2/61 (3%)

Query: 344 DEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD-FDSTGNI 402
           D+   G  +  ++ +AG   S  EA R +++  + +N  +I +  L +  +D     G +
Sbjct: 30  DKTPPGDRIAKVLSRAG-VASRREAERMIEAGRVSVNGKVIDSPALNVTPRDKITVDGTL 88

Query: 403 K 403
            
Sbjct: 89  V 89


>gi|229819835|ref|YP_002881361.1| tryptophanyl-tRNA synthetase [Beutenbergia cavernae DSM 12333]
 gi|229565748|gb|ACQ79599.1| tryptophanyl-tRNA synthetase [Beutenbergia cavernae DSM 12333]
          Length = 410

 Score = 51.0 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 37/230 (16%), Positives = 64/230 (27%), Gaps = 29/230 (12%)

Query: 26  ELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSIIGDP 84
           E +I    G      G   T   LH GH    +     LQ+ G +   ++          
Sbjct: 77  EAEIAADAGRFRVLTGDRPTGR-LHLGHYLATLRSRVRLQELGVRTFVVIADY----QVI 131

Query: 85  SFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREI 144
           + RD    +     + + +          +    G+T     +    L  +  +  L  +
Sbjct: 132 TDRDAPGPV--RDRVLDLVADYLA-----LGLDPGRTTIFAHSQVPELNEL-MLPFLSLV 183

Query: 145 GSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWG 204
                         +       +  S L   Y + QA D +         L   G DQ  
Sbjct: 184 TDAELRRNPTVKSELAD--SGGRPFSGLLLTYPVHQAADILF----CGANLVPVGKDQLP 237

Query: 205 NIICGIDLGERLKT--------PKLFALTS-PLLTTASGTKMGKTLSGAI 245
           ++     +  R                LT  P +    G KM K+   A+
Sbjct: 238 HLELARTIARRFAERYGDAGLVAPEALLTDAPHVLGLDGRKMSKSRGNAV 287


>gi|257440171|ref|ZP_05615926.1| tryptophan--tRNA ligase [Faecalibacterium prausnitzii A2-165]
 gi|257197523|gb|EEU95807.1| tryptophan--tRNA ligase [Faecalibacterium prausnitzii A2-165]
          Length = 353

 Score = 51.0 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 41/239 (17%), Positives = 68/239 (28%), Gaps = 41/239 (17%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN 102
            T   LH GH    +     LQ TG      +     +I D      +      +++++ 
Sbjct: 11  PTGR-LHVGHYVGSLKERVRLQNTGKFDEIYI-----MIADAQ--ALTDNADNPEKVRQ- 61

Query: 103 IEKIKGIFSSFIKY-----GTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFE 157
                 I    + Y        K    + +    L  + +  +     S    N  +  E
Sbjct: 62  -----NILQVALDYLACGLDPNKVHIFIQSMVPQLTELSFYYMNLVTVSRLQRNPTVKSE 116

Query: 158 SVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQ------------WGN 205
                 +    + F  F Y I QA D       +       G DQ              N
Sbjct: 117 IQMRNFETSIPVGF--FTYPISQAADITA----FGATTVPAGEDQMPMLEQCREIVHKFN 170

Query: 206 IICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNI 264
            + G  L          A    L       KM K+L   I+L+ E   P +  +   ++
Sbjct: 171 AVYGETLTMPEIMLPQNAACLRLPGIDGKAKMSKSLGNCIYLSDE---PEDIKKKIMSM 226


>gi|255066807|ref|ZP_05318662.1| tryptophan--tRNA ligase [Neisseria sicca ATCC 29256]
 gi|255048882|gb|EET44346.1| tryptophan--tRNA ligase [Neisseria sicca ATCC 29256]
          Length = 336

 Score = 51.0 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 41/228 (17%), Positives = 67/228 (29%), Gaps = 49/228 (21%)

Query: 166 EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALT 225
           +  +    ++Y IL   D +    N +  +   G DQ  ++    D+  R         T
Sbjct: 128 DHGVEMGLYSYPILMTADILMFNAN-EVPV---GRDQIQHVEMARDIAGRFNHRFKEVFT 183

Query: 226 SP---------LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWR---------NIDDA 267
            P         LL    G KM K+    I L +                         D 
Sbjct: 184 LPEVKIDENVELLVGLDGRKMSKSYGNTIPLWENDKKTQKSVNKIITNMKEPGEPKQPDE 243

Query: 268 D-VVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMEC 326
             +    K  +T   +        +G    EAKK++A +I         AE A       
Sbjct: 244 SPLFEIYKAFSTPSETAAFTQMLAEGLAWGEAKKLLAAKIN--------AELAEPRER-- 293

Query: 327 FDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKS 374
                            +E++     +  I++ G A +  EAR  L  
Sbjct: 294 ----------------YNELTANPSQIEDILQTGAAKARKEARELLDQ 325


>gi|291287275|ref|YP_003504091.1| tryptophanyl-tRNA synthetase [Denitrovibrio acetiphilus DSM 12809]
 gi|290884435|gb|ADD68135.1| tryptophanyl-tRNA synthetase [Denitrovibrio acetiphilus DSM 12809]
          Length = 326

 Score = 51.0 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 46/298 (15%), Positives = 93/298 (31%), Gaps = 51/298 (17%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGG---TSIIGDPSFRDESRRMMRSQ 97
           G   T   LH GH    +  +   +  +     +      T+    P    E+R+ +   
Sbjct: 7   GMRPTGR-LHIGHYFGALKNWVDLQDKYDCNYFVADWHALTTNYEAPENIIENRKQL--- 62

Query: 98  EIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFE 157
            + + +          +     K    + +      +I + +L   +     V  +    
Sbjct: 63  -VLDWLS---------VGLDPEKCTMFVQS-----HNIYHAELSMLLSMITPVPWLERCP 107

Query: 158 SVR--SRLKREQSLSFLEFN-YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
           + +   + +  + LS L F  Y ++   D +     Y  +    G DQ  +I    ++  
Sbjct: 108 TYKEIKQEQANKDLSNLGFLSYPVIMTSDIIM----YGAKYVPVGEDQLPHIEISREIVR 163

Query: 215 R---------LKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWR--- 262
           R          + PK      P L    G KM K+   AI L++++       +      
Sbjct: 164 RFHHLYNCEVFEEPKGLLTEVPRLPGLDGRKMSKSYGNAIMLSEDLKEVEKKIKRMLTDT 223

Query: 263 ---NIDDAD------VVSFAKRL-TTLPMSEIDRMAKLQGKEINEAKKIIATEITTMV 310
               + D        V  + K   T    +EI            + KKI+   +  ++
Sbjct: 224 NRKRLTDPGNPEVCPVFDYHKVFSTEDERAEITEGCTKATMGCMDCKKILMKHMFALL 281


>gi|47229479|emb|CAF99467.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 531

 Score = 51.0 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 44/234 (18%), Positives = 70/234 (29%), Gaps = 23/234 (9%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R    ++    +L  +  +  +  Y G   T    H  +   +  +    K G +  
Sbjct: 13  LITRNL-QEVLGEEKLKQILQERELKLYWGTATTGKP-HVAYFVPMSKIADFLKAGCEVT 70

Query: 72  SLMGGGTSII---GDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
            L     + +     P    E R     Q I+  +E I       +K+  G         
Sbjct: 71  ILFADLHAYLDNMKAPWELLELRVKYYEQVIKAMLESIGVPLEK-LKFVKGTDYQ----- 124

Query: 129 ETWLCSIKYIDLLREIGSFFSV-NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
              L     +D+ R          +    E V+   + E  L      Y  LQA D   L
Sbjct: 125 ---LSREYTLDVYRLSSVVTEHDAKKAGAEVVK---QVEHPL-LSGLLYPGLQALDEEFL 177

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
                   Q GG DQ             L   K   L +P++   +G KM  + 
Sbjct: 178 K----VDAQFGGVDQRKIFTVAEKYLPSLGYAKRAHLMNPMVPGLTGAKMSSSE 227


>gi|327354686|gb|EGE83543.1| tyrosyl-tRNA synthetase [Ajellomyces dermatitidis ATCC 18188]
          Length = 396

 Score = 51.0 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 44/238 (18%), Positives = 68/238 (28%), Gaps = 30/238 (12%)

Query: 7   DFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           +   +L     I  +       IL     +  Y G   T    H G+   ++ L    + 
Sbjct: 17  NLQEVLKP-ELIEDV-------ILRQNRPLKVYFGTATTGRP-HCGYFCPIVKLAHFLRA 67

Query: 67  GHKPISLMGGGTSII---GDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
           G     L+      +     P      R       I   +E I                 
Sbjct: 68  GCHVKILLADIHGFLDNLKAPIDLVNFRAKYYRYVITALLEAIHVPIDKLEFVLGSDFQ- 126

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSV-NRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
                   L     +DL R          +    E V+        LS L   Y ++QA 
Sbjct: 127 --------LSPKYTMDLFRLSSVVTEHDAKKAGAEVVKQ--VDNAPLSGL--IYPLMQAL 174

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           D   L    D   Q GG DQ       ++   R+   +   L SP++   +G KM  +
Sbjct: 175 DEEHL----DVDAQFGGVDQRKIFTLALETLPRIGYKERAHLMSPMVPGLAGGKMSAS 228


>gi|19074853|ref|NP_586359.1| TRYPTOPHANYL tRNA SYNTHETASE [Encephalitozoon cuniculi GB-M1]
 gi|51704221|sp|O96771|SYW_ENCCU RecName: Full=Tryptophanyl-tRNA synthetase; AltName:
           Full=Tryptophan--tRNA ligase; Short=TrpRS
 gi|19069578|emb|CAD25963.1| TRYPTOPHANYL tRNA SYNTHETASE [Encephalitozoon cuniculi GB-M1]
          Length = 385

 Score = 51.0 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 35/248 (14%), Positives = 77/248 (31%), Gaps = 29/248 (11%)

Query: 15  RGFIHQISNPREL-DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG +    +   L D + +      Y G   ++ ++H GH    +L  ++Q      + +
Sbjct: 59  RGIVFAHRDFNLLLDEIANNRPFYLYTGRGPSSKTMHIGHTIPFLLCKYMQDAFKIRLVI 118

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                         D+ + + +S  +++ +   +      +  G       + +N     
Sbjct: 119 -----------QITDDEKFLWKSMRLEDAMAYGRENIKDIVALGFDPKLTYIFSNVE--A 165

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQAYDFVELAKNYD 192
           S  + + + +I    ++N  +            Q      E       A  F    +   
Sbjct: 166 SHHFEENILKISKTINLNEAIKVFGFDMSSNIGQVGFPAKEI------APCFSSSFRFIG 219

Query: 193 ----CRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT--KMGKTLSG-AI 245
               C +     DQ        D  + L   K  ++   LL    G   KM  +    +I
Sbjct: 220 KGAMCLVP-AAVDQDPFFRLARDKAKALGEKKPSSIYVSLLPDLKGVNRKMSASDPNSSI 278

Query: 246 WLNKEMTS 253
           +L+    +
Sbjct: 279 YLDDAQDT 286


>gi|258404893|ref|YP_003197635.1| tryptophanyl-tRNA synthetase [Desulfohalobium retbaense DSM 5692]
 gi|257797120|gb|ACV68057.1| tryptophanyl-tRNA synthetase [Desulfohalobium retbaense DSM 5692]
          Length = 330

 Score = 51.0 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 52/337 (15%), Positives = 95/337 (28%), Gaps = 78/337 (23%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQ-KTGHKPISLMGGG---TSIIGDPSFRDESRRMMRS 96
           G   T   LH GH   ++   W Q +  +     +      TS   DP+        +  
Sbjct: 10  GMRPTGP-LHLGHYFGVLQ-NWTQLQEEYDCYFFIADWHALTSEYNDPTHIKSFVPQLVM 67

Query: 97  QEIQENIE--KIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRML 154
             +   ++  K      S IK     ++  +L     L  I  +  L             
Sbjct: 68  DWVAGGLDPSKCTLFLQSHIK---AHSELHLL-----LSMITPLGWLE--------RNPT 111

Query: 155 SFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
             E ++  L  +   ++    Y +L + D +     Y   L   G DQ  ++    ++  
Sbjct: 112 YKE-IKQELAAKDLNTYGFLGYPVLMSSDILM----YRPELVPVGHDQLPHLELCREIAR 166

Query: 215 RLKT-------PKLFALTSPL-LTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDD 266
           R               LT    L    G KM K+   AI L ++M +         ++  
Sbjct: 167 RFNHLYGDFFPEPQAKLTETAKLPGLDGRKMSKSYGNAIHLGEDMETIKP---KIMSMLT 223

Query: 267 ADVVS---------------FAKRL-TTLPMSEIDRMAKLQGKEINEAKKII-------- 302
                               + + L +    +E+        +     KK +        
Sbjct: 224 DTARKRLKDPGDPENCNLFPYLELLASPEETAEVHEGCTQATRGCMACKKSLLAHMDRFL 283

Query: 303 -------------ATEITTMVHGREEAEKAATAAMEC 326
                          E+  ++H +  A  A  AA   
Sbjct: 284 TPIQQRRRELEKNPDEVWDIIH-QGTARAAEEAAQTL 319


>gi|15606299|ref|NP_213678.1| tryptophanyl-tRNA synthetase [Aquifex aeolicus VF5]
 gi|6226200|sp|O67115|SYW_AQUAE RecName: Full=Tryptophanyl-tRNA synthetase; AltName:
           Full=Tryptophan--tRNA ligase; Short=TrpRS
 gi|2983495|gb|AAC07073.1| tryptophanyl-tRNA synthetase [Aquifex aeolicus VF5]
          Length = 395

 Score = 51.0 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 33/173 (19%), Positives = 56/173 (32%), Gaps = 29/173 (16%)

Query: 153 MLSFESVRSR-LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGID 211
           +L   +V  R      +  FL   Y +LQA D + + K     +   G DQ  +I    +
Sbjct: 175 ILKRLNVSKRDFYETDTFGFL--GYPVLQAADIL-IYKGEGVPV---GEDQLPHIELSRE 228

Query: 212 LGERLKT--------PKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
           +  R           PK     +P +    G KM K+   A++ + E             
Sbjct: 229 IARRFNRLYGKIFPEPKALLTETPKIPGTDGRKMSKSYGNAVFFSDEKEEVEKKVMKMFT 288

Query: 264 IDDAD------------VVSFAKRLT--TLPMSEIDRMAKLQGKEINEAKKII 302
                            V S+ K  T     + +I+   +       E K+I+
Sbjct: 289 DPQKIRKNDPGRPEICPVFSWHKLFTKDEELVKKIEEDCRAGRLGCVECKRIL 341


>gi|53716475|ref|YP_105053.1| tryptophanyl-tRNA synthetase II [Burkholderia mallei ATCC 23344]
 gi|67643138|ref|ZP_00441886.1| tryptophan--tRNA ligase [Burkholderia mallei GB8 horse 4]
 gi|121597311|ref|YP_991009.1| tryptophanyl-tRNA synthetase II [Burkholderia mallei SAVP1]
 gi|124382585|ref|YP_001025409.1| tryptophanyl-tRNA synthetase II [Burkholderia mallei NCTC 10229]
 gi|126443775|ref|YP_001063662.1| tryptophanyl-tRNA synthetase II [Burkholderia pseudomallei 668]
 gi|126447438|ref|YP_001077472.1| tryptophanyl-tRNA synthetase II [Burkholderia mallei NCTC 10247]
 gi|134278622|ref|ZP_01765336.1| tryptophanyl-tRNA synthetase [Burkholderia pseudomallei 305]
 gi|167002340|ref|ZP_02268130.1| tryptophan--tRNA ligase [Burkholderia mallei PRL-20]
 gi|254177298|ref|ZP_04883954.1| tryptophanyl-tRNA synthetase [Burkholderia mallei ATCC 10399]
 gi|254186021|ref|ZP_04892539.1| tryptophanyl-tRNA synthetase [Burkholderia pseudomallei Pasteur
           52237]
 gi|254202988|ref|ZP_04909350.1| tryptophanyl-tRNA synthetase [Burkholderia mallei FMH]
 gi|254208320|ref|ZP_04914669.1| tryptophanyl-tRNA synthetase [Burkholderia mallei JHU]
 gi|52422445|gb|AAU46015.1| tryptophanyl-tRNA synthetase [Burkholderia mallei ATCC 23344]
 gi|121225109|gb|ABM48640.1| tryptophanyl-tRNA synthetase [Burkholderia mallei SAVP1]
 gi|126223266|gb|ABN86771.1| tryptophan--tRNA ligase [Burkholderia pseudomallei 668]
 gi|126240292|gb|ABO03404.1| tryptophan--tRNA ligase [Burkholderia mallei NCTC 10247]
 gi|134250406|gb|EBA50486.1| tryptophanyl-tRNA synthetase [Burkholderia pseudomallei 305]
 gi|147746033|gb|EDK53111.1| tryptophanyl-tRNA synthetase [Burkholderia mallei FMH]
 gi|147751007|gb|EDK58075.1| tryptophanyl-tRNA synthetase [Burkholderia mallei JHU]
 gi|157933707|gb|EDO89377.1| tryptophanyl-tRNA synthetase [Burkholderia pseudomallei Pasteur
           52237]
 gi|160698338|gb|EDP88308.1| tryptophanyl-tRNA synthetase [Burkholderia mallei ATCC 10399]
 gi|238524398|gb|EEP87831.1| tryptophan--tRNA ligase [Burkholderia mallei GB8 horse 4]
 gi|243061988|gb|EES44174.1| tryptophan--tRNA ligase [Burkholderia mallei PRL-20]
 gi|261826872|gb|ABM99667.2| tryptophan--tRNA ligase [Burkholderia mallei NCTC 10229]
          Length = 346

 Score = 51.0 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 44/293 (15%), Positives = 89/293 (30%), Gaps = 45/293 (15%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
            T + LH GH    +      +  H+   L+    ++  +    D+ RR      + E  
Sbjct: 20  PTGA-LHLGHYIGSLKTRIALQDTHRQFILVADTQALTDNAHDPDKVRR-----NVIEVA 73

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR- 162
                +          ++   + +    L  +     L  +            + + +R 
Sbjct: 74  LDYLAVG-----IDPRRSTIAVQSGLPALAELTLF-YLNFVTVARLERNPTIKDEIHARG 127

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT---- 218
             R+    FL   Y + QA D      +    + +G  DQ   I    ++  R+      
Sbjct: 128 FGRDIPAGFL--CYPVAQAADITAFKAD---TVPVG-DDQLPLIEQTNEIVRRVNRQAGA 181

Query: 219 ---PKLFALTSPL--LTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYW------RNIDD 266
              P+  AL SP   L    G  KM K+   AI L+    +  +  +          + D
Sbjct: 182 DVLPEASALISPTGRLPGVDGKAKMSKSQGNAIALSSSPDAIADAVRRMYTDPNHLRVSD 241

Query: 267 ------ADVVSFAKRLTTLPMSEIDRMAKLQGKEI---NEAKKIIATEITTMV 310
                   V ++          E++R+              K+ +   +  ++
Sbjct: 242 PGTVEGNVVFTYLDAF-DGEPDELERLKAAYRAGGLGDMVLKRRLEDRLQALI 293


>gi|312134676|ref|YP_004002014.1| tryptophanyl-tRNA synthetase [Caldicellulosiruptor owensensis OL]
 gi|311774727|gb|ADQ04214.1| tryptophanyl-tRNA synthetase [Caldicellulosiruptor owensensis OL]
          Length = 325

 Score = 51.0 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 31/175 (17%), Positives = 63/175 (36%), Gaps = 31/175 (17%)

Query: 160 RSRLKREQSLSFLEFN-YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK- 217
           + R  +E++++   F  Y  LQA D +     Y   L   G DQ  ++    ++  R   
Sbjct: 112 QMRELKERNIATYGFLGYPCLQAADILI----YKAELVPVGEDQLPHLELTREIARRFNF 167

Query: 218 -------TPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRN-IDDA-- 267
                   P+    T  +L    G KM K+    I L++++    +  +   N + D   
Sbjct: 168 LYGQTFPEPQAILNTVKVLVGTDGRKMSKSYGNTIALSEDL---ESVRKKVMNMVTDPAR 224

Query: 268 ------------DVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMV 310
                        V ++ +  +   ++E +   +       E KK +   I+  +
Sbjct: 225 IRKNDPGHPEVCTVFAYHQIFSQEIVAETEEDCRQGRIGCVECKKRLFENISRFL 279


>gi|310779341|ref|YP_003967674.1| tryptophanyl-tRNA synthetase [Ilyobacter polytropus DSM 2926]
 gi|309748664|gb|ADO83326.1| tryptophanyl-tRNA synthetase [Ilyobacter polytropus DSM 2926]
          Length = 327

 Score = 51.0 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 42/305 (13%), Positives = 88/305 (28%), Gaps = 43/305 (14%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   +   LH G+    +  F   +  ++    +    S+   P  +             
Sbjct: 7   GIQPSGV-LHLGNYFGAIKQFIENQDKYEGFYFIADYHSLTSSPDPKS------------ 53

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
              E    I   ++  G     A +          ++ +L   + +   +  +    S +
Sbjct: 54  -LRENSYNIVLDYLALGLDPEKATIFLQSD---MPEHAELAWILSNVTPMGLLERAHSFK 109

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK--- 217
            +  +  + +   F Y +L A D +     YD  +   G DQ  ++    D+  +     
Sbjct: 110 DKTAKGIAANAGLFTYPVLMAADILM----YDPDIVPVGKDQKQHLEMTRDIAMKFNLQY 165

Query: 218 TPKLFALTSPLLT-------TASGTKMGKTLSGAI-WLNKEMTSPYNFWQYWRNI----- 264
             ++F L  P +           G KM K+    I     +            +      
Sbjct: 166 EKEIFKLPEPGILESLAVVPGTDGQKMSKSYGNTIEMFASKKNLKKQIMSVVTDSTPLED 225

Query: 265 ---DDADVVSFAKRL-TTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAA 320
               D ++    K   +   + E+ +     G     AK  +   +      +E  EK  
Sbjct: 226 PKDPDNNITILYKLFASEEKVEEMRQKFMAGGYGYGHAKNELLEAVLEYF--KEAREKRE 283

Query: 321 TAAME 325
             A  
Sbjct: 284 ELAKN 288


>gi|285017077|ref|YP_003374788.1| tryptophanyl-tRNA synthetase (tryptophan--tRNA ligase) protein
           [Xanthomonas albilineans GPE PC73]
 gi|283472295|emb|CBA14801.1| probable tryptophanyl-trna synthetase (tryptophan--trna ligase)
           protein [Xanthomonas albilineans]
          Length = 429

 Score = 51.0 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 39/217 (17%), Positives = 68/217 (31%), Gaps = 38/217 (17%)

Query: 50  HAGHLTQLM--LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIK 107
           H G+    +   L   ++ G +    +    S+I         R  +             
Sbjct: 16  HLGNYVGAIRPALQASRRPGIESFFFLADLHSLIKAQDPMRTQRSTLEIAATWLAAGLDP 75

Query: 108 GIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV--RSRLKR 165
                + +    +T     N  TW         L  + S   +NR  ++++   ++R   
Sbjct: 76  AQVWFYRQSDVPET-----NELTW--------FLTCVASKGILNRAHAYKAAVDKNRADG 122

Query: 166 EQ---SLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLF 222
           E     ++   F Y +L A D + L K     +   G DQ  +I    D  +R     ++
Sbjct: 123 EDEDAGVTAGLFMYPVLMAADIL-LFKAQQVPV---GRDQIQHIEMARDFAQRFN--HVY 176

Query: 223 A---LTSP---------LLTTASGTKMGKTLSGAIWL 247
                T P          L    G KM K+    I L
Sbjct: 177 GRDYFTLPDALIDEQVATLPGLDGRKMSKSYDNTIPL 213


>gi|237508275|ref|ZP_04520990.1| tryptophan--tRNA ligase [Burkholderia pseudomallei MSHR346]
 gi|235000480|gb|EEP49904.1| tryptophan--tRNA ligase [Burkholderia pseudomallei MSHR346]
          Length = 346

 Score = 51.0 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 39/224 (17%), Positives = 72/224 (32%), Gaps = 29/224 (12%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
            T + LH GH    +      +  H+   L+    ++  +    D+ RR      + E  
Sbjct: 20  PTGA-LHLGHYIGSLKTRIALQDTHRQFILVADTQALTDNAHDPDKVRR-----NVIEVA 73

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR- 162
                +          ++   + +    L  +     L  +            + + +R 
Sbjct: 74  LDYLAVG-----IDPRRSTIAVQSGLPALAELTLF-YLNFVTVARLERNPTIKDEIHARG 127

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT---- 218
             R+    FL   Y + QA D      +    + +G  DQ   I    ++  R+      
Sbjct: 128 FGRDIPAGFL--CYPVAQAADITAFKAD---TVPVG-DDQLPLIEQTNEIVRRVNRQAGA 181

Query: 219 ---PKLFALTSPL--LTTASGT-KMGKTLSGAIWLNKEMTSPYN 256
              P+  AL SP   L    G  KM K+   AI L+    +  +
Sbjct: 182 DVLPEASALISPTGRLPGVDGKAKMSKSQGNAIALSSSPDAIAD 225


>gi|295673472|ref|XP_002797282.1| tyrosyl-tRNA synthetase [Paracoccidioides brasiliensis Pb01]
 gi|226282654|gb|EEH38220.1| tyrosyl-tRNA synthetase [Paracoccidioides brasiliensis Pb01]
          Length = 410

 Score = 51.0 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 41/213 (19%), Positives = 62/213 (29%), Gaps = 22/213 (10%)

Query: 32  SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSII---GDPSFRD 88
               +  Y G   T    H G+   ++ L    + G     L+      +     P    
Sbjct: 34  QNRPLKVYFGTATTGRP-HCGYFCPIVKLAHFLQAGCHVKILLADIHGFLDNLKAPIDLV 92

Query: 89  ESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFF 148
             R       I   +E I                         L S   +DL R      
Sbjct: 93  NYRAEYYRYVITALLEAIHVPIEKLEFVLGSDYQ---------LSSRYTMDLFRLSSVVT 143

Query: 149 SV-NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNII 207
               +    E V+        LS L   Y ++QA D   L    D   Q GG DQ     
Sbjct: 144 EHDAKKAGAEVVKQ--VDNAPLSGL--IYPLMQALDEEHL----DVDAQFGGVDQRKIFA 195

Query: 208 CGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
             +D   R+   +   L +P++   +G KM  +
Sbjct: 196 LALDTLPRIGYKERAHLMNPMVPGLAGGKMSAS 228


>gi|269215018|ref|ZP_06158985.1| tryptophan--tRNA ligase [Neisseria lactamica ATCC 23970]
 gi|269208502|gb|EEZ74957.1| tryptophan--tRNA ligase [Neisseria lactamica ATCC 23970]
          Length = 280

 Score = 51.0 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 30/154 (19%), Positives = 46/154 (29%), Gaps = 23/154 (14%)

Query: 174 FNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSP------ 227
           F+Y IL   D +    N +  +   G DQ  ++    D+  R         T P      
Sbjct: 80  FSYPILMTADILMFNAN-EVPV---GRDQIQHVEMARDIAGRFNHRFQELFTLPEVKIDE 135

Query: 228 ---LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWR---------NIDDAD-VVSFAK 274
              LL    G KM K+    I L +                         D   +    K
Sbjct: 136 NVELLVGLDGRKMSKSYGNTIPLWENDKKTQKSVNKIITNMKEPGEPKQPDESPLFEIYK 195

Query: 275 RLTTLPMSEIDRMAKLQGKEINEAKKIIATEITT 308
             +    +        +G    EAKK++A +I  
Sbjct: 196 AFSMPSETAAFTQMLAEGLAWGEAKKLLAAKINA 229


>gi|156564609|gb|ABU80628.1| tryptophanyl-tRNA synthetase [Artemia franciscana]
          Length = 429

 Score = 51.0 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 53/326 (16%), Positives = 105/326 (32%), Gaps = 41/326 (12%)

Query: 12  LSERGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           L  RG      +   +     +G     Y G   ++ ++H GHL   +   WLQ+     
Sbjct: 90  LLRRGVFFSHRDLHVILDCVEKGQKFYLYTGRGPSSDAMHLGHLIPFLFTKWLQE----- 144

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN-IEKIKGIFSSFIKYGTGKTDALMLNNE 129
              +     II          + +  ++++E  +E IK I +  + +   KT   +  N 
Sbjct: 145 ---VFDVPLIIQITDDEKYYWKSLSLEKVKEMAVENIKDIIA--MDFHPDKT--FIFRNL 197

Query: 130 TWLCS-IKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ-SLSFLEFNYMILQA-YDFVE 186
            ++   + + + L  I    +V+++             +    F +       A     +
Sbjct: 198 EYMGQSVGFQETLARIQKLVTVSKIRGQFGFSDSDCMGKYPFPFNQAVPSFSSAFPQIFK 257

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDL---GERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
              N  C +  G  DQ        D+    + LK   + +   P L  A+ +KM  +   
Sbjct: 258 GKTNVPCLIPCG-IDQDPYFRMTRDVAPRLKFLKPALVHSKFFPALQGAN-SKMSASDPN 315

Query: 244 -AIWLNKEMTSPYNFWQYWRNIDDADVVS----------------FAKRLT--TLPMSEI 284
            AI+L             +    D D V                 +          + +I
Sbjct: 316 SAIFLTDTHEEIKEKINKYAYSGDRDTVKEHQEKGGDCSVDIAFQYLTYFEENDEELEKI 375

Query: 285 DRMAKLQGKEINEAKKIIATEITTMV 310
            +          + KKI+  ++T +V
Sbjct: 376 RQDYSSGAMLSGKIKKILIGKLTRVV 401


>gi|302871384|ref|YP_003840020.1| tryptophanyl-tRNA synthetase [Caldicellulosiruptor obsidiansis
           OB47]
 gi|302574243|gb|ADL42034.1| tryptophanyl-tRNA synthetase [Caldicellulosiruptor obsidiansis
           OB47]
          Length = 325

 Score = 51.0 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 31/175 (17%), Positives = 63/175 (36%), Gaps = 31/175 (17%)

Query: 160 RSRLKREQSLSFLEFN-YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK- 217
           + R  +E++++   F  Y  LQA D +     Y   L   G DQ  ++    ++  R   
Sbjct: 112 QMRELKERNIATYGFLGYPCLQAADILI----YKAELVPVGEDQLPHLELTREIARRFNF 167

Query: 218 -------TPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRN-IDDA-- 267
                   P+    T  +L    G KM K+    I L++++    +  +   N + D   
Sbjct: 168 LYGQTFPEPQAILNTVKVLVGTDGRKMSKSYGNTIALSEDL---ESVRKKVMNMVTDPAR 224

Query: 268 ------------DVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMV 310
                        V ++ +  +   ++E +   +       E KK +   I+  +
Sbjct: 225 IRKNDPGHPEVCTVFAYHQIFSQEIVAETEEDCRQGRIGCVECKKRLFENISRFL 279


>gi|257064185|ref|YP_003143857.1| tryptophanyl-tRNA synthetase [Slackia heliotrinireducens DSM 20476]
 gi|256791838|gb|ACV22508.1| tryptophanyl-tRNA synthetase [Slackia heliotrinireducens DSM 20476]
          Length = 349

 Score = 51.0 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 58/360 (16%), Positives = 109/360 (30%), Gaps = 57/360 (15%)

Query: 22  SNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQ-LMLLFWLQKTGHKPISLMGGGTSI 80
           SN    DI  + G      G   T   LH GH    +M    +Q  G   + L+      
Sbjct: 14  SNDIRADIAVNPGNYRMLTGDRPTGR-LHLGHYFGSIMNRVAMQNAGVPTMILIADY--- 69

Query: 81  IGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDL 140
               + RD +  +     +   +       ++ I                  C+   +  
Sbjct: 70  -QVITDRDTTANIQ--DNVYNMV---MDYIAAGIDPDKTPIYIHSAVPA---CNQLMLPF 120

Query: 141 LREIGSFFSVNRMLSFES-VRSRLK-REQSLSFLEFNYMILQAYDFVELAKNYDCRLQMG 198
           L  +         L     V++ ++     L+ L   Y + QA D +    N    +   
Sbjct: 121 LSLVSEAE-----LQRNPTVKAEMEASGHELTGLLLTYPVHQACDILFCKAN----IVPV 171

Query: 199 GSDQWGNIICGIDLGERLKT--PKLF-----ALTSPL-LTTASGTKMGKTLSGAIWLNKE 250
           G DQ  +I     +  R      K+F      L+  + +    G KM K+   +I L+  
Sbjct: 172 GKDQLPHIELTRQIARRFNKRYAKVFPEPDGILSDAIEIPGLDGRKMSKSYGNSIMLSAT 231

Query: 251 MTSPYNFWQYWRNIDDAD---------------VVSFAKRLTTLPMSEIDRMAKLQGKEI 295
                   +   +  D+D               +++ A   T     EI     + G   
Sbjct: 232 AEETAKLIKK--SQTDSDRNITFDPENRPGVSALLTTAALCTGRKEVEIAEEIGMGGG-- 287

Query: 296 NEAKKIIATEITTMV--HGREEAEKAAT---AAMECFDMSIHSQHMPTISISKDEVSRGM 350
              KK +   +   +  H    AE A           + +  +  +   ++++   + GM
Sbjct: 288 GALKKYVTESVNEFLAPHRERRAELAKDMDYIKDVLHEGNKKANEIAEATLNEVREAMGM 347


>gi|312128100|ref|YP_003992974.1| tryptophanyl-tRNA synthetase [Caldicellulosiruptor hydrothermalis
           108]
 gi|311778119|gb|ADQ07605.1| tryptophanyl-tRNA synthetase [Caldicellulosiruptor hydrothermalis
           108]
          Length = 325

 Score = 51.0 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 32/175 (18%), Positives = 63/175 (36%), Gaps = 31/175 (17%)

Query: 160 RSRLKREQSLSFLEFN-YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK- 217
           + R  +E++++   F  Y  LQA D +     Y   L   G DQ  ++    ++  R   
Sbjct: 112 QMRELKERNIATYGFLGYPCLQAADILI----YKAELVPVGEDQLPHLELTREIARRFNF 167

Query: 218 -------TPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRN-IDDA-- 267
                   P+    T  +L    G KM K+    I L++++    +  +   N + D   
Sbjct: 168 LYGQTFPEPQAILNTVKVLVGTDGRKMSKSYGNTIALSEDL---ESVRKKVMNMVTDPAR 224

Query: 268 ------------DVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMV 310
                        V ++ +  +   +SE +   +       E KK +   I+  +
Sbjct: 225 IRKNDPGHPEVCTVFAYHQIFSPEIVSETEEDCRQGKIGCVECKKRLFENISRFL 279


>gi|148906625|gb|ABR16464.1| unknown [Picea sitchensis]
          Length = 399

 Score = 51.0 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 58/338 (17%), Positives = 103/338 (30%), Gaps = 51/338 (15%)

Query: 15  RGFIHQISNPRELDILCSQGV-VTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG         ++     +G     Y G   ++ +LH GHL   M   +LQ     P+ +
Sbjct: 64  RGVFFAHREFDKILDAFEKGENFYLYTGRGPSSEALHLGHLVPFMFTKYLQDAFKVPLVI 123

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                      +   E  + +  +  ++ I     I  +FI             N     
Sbjct: 124 QLTDDEKCMWKNLTIEESQRLARENAKDIIACGFDISRTFIFSDFDYVGGAFYKN----- 178

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY-----DFVELA 188
                  +  I    ++N++            E  +  + F    +QA       F  L 
Sbjct: 179 -------MVRIAKCVTLNQV--RAIFG--FTGEDHIGKVSF--PPVQAAPSFPSSFPHLF 225

Query: 189 KNYD---CRLQMGGSDQWGNIICGIDLGERLKTPKLF---ALTSPLLTTASGTKMGKTLS 242
            + +   C +     DQ        D+  R+   K     +L  P L   +G KM  + S
Sbjct: 226 GDKNNLRCLIPC-AIDQDPYFRMTRDVAPRIGCQKPSLIESLFFPALQGETG-KMSASDS 283

Query: 243 -GAIWLN------KEMTSPYNFWQ----------YWRNIDDADVVSFAKRL--TTLPMSE 283
             AI++       K   + Y F            +  N++    V +          +  
Sbjct: 284 TTAIYVTDSAKDIKNKVNKYAFSGGGDTIENHRKFGANLEVDISVKYLSFFLEDDAELEN 343

Query: 284 IDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAAT 321
           I +          E KK++   +T MV    +A  A T
Sbjct: 344 IKQEYGAGRMLTGEVKKLLIEVLTNMVERHRKARAAVT 381


>gi|294631032|ref|ZP_06709592.1| tryptophanyl-tRNA synthetase [Streptomyces sp. e14]
 gi|292834365|gb|EFF92714.1| tryptophanyl-tRNA synthetase [Streptomyces sp. e14]
          Length = 337

 Score = 51.0 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 55/297 (18%), Positives = 99/297 (33%), Gaps = 47/297 (15%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSI--IGDPSFRDESRRMMRSQE 98
           G   TA S H G+    +  +   +  H    ++    +I    DP+    + R+  +Q 
Sbjct: 11  GIQPTAGSFHLGNYLGAVRQWVSLQESHDAFYMLADLHAITVAQDPAELRANTRVAAAQL 70

Query: 99  IQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
           +   ++  +               A ++N  T       +   ++  +    +R      
Sbjct: 71  LAAGLDPDRCTLFVQSHVPEHAQLAWVMNCLTGFGEAGRMTQFKDKSAKQGADR------ 124

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
                      S   F Y ILQ  D + L + ++  +   G DQ  +I    DL ER   
Sbjct: 125 ----------TSVGLFTYPILQVADIL-LYQAHEVPV---GEDQRQHIELTRDLAERFNG 170

Query: 219 --------PKLFAL--TSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRN-IDD 266
                   PK + L  T+ +      T KM K+ S    L   +  P    +  R+ + D
Sbjct: 171 RYGDTFTVPKAYILKETAKIYDLQEPTAKMSKSASTPKGLINLLDDPKATAKKVRSAVTD 230

Query: 267 AD-VVSF-----------AKRLTTLPMSEIDRMAKL-QGKEINEAKKIIATEITTMV 310
            D V+ +               +TL  + I  + +   GK     K  +A  +   V
Sbjct: 231 TDTVIRYDPETKAGVSNLLTIYSTLTGTGIGELEEKYAGKGYGALKTDLAEIMVEFV 287


>gi|257452401|ref|ZP_05617700.1| tryptophanyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
 gi|317058944|ref|ZP_07923429.1| tryptophanyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
 gi|313684620|gb|EFS21455.1| tryptophanyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
          Length = 326

 Score = 51.0 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 35/237 (14%), Positives = 68/237 (28%), Gaps = 32/237 (13%)

Query: 144 IGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQW 203
           + +   V  +    S + +L +  + +   FNY  L A D +     YD  +   G DQ 
Sbjct: 93  LCNVAPVGLLERAHSYKDKLAKGFTPNMGLFNYPALMAADILI----YDADVVPVGKDQK 148

Query: 204 GNIICGIDLGERLKTP---KLFALTSPLLT-------TASGTKMGKTLSGAI-WLNKEMT 252
            ++    D+  +         F L  PL+           G KM K+    I     +  
Sbjct: 149 QHLEMTRDIAAKFNQQYEVDFFKLPDPLIMDKVAVVPGTDGQKMSKSYGNTIQMFAPKKQ 208

Query: 253 SPYNFWQYWRNI------------DDADVVSFAKRLTTLPMS-EIDRMAKLQGKEINEAK 299
                 Q   +I             D ++         +    E+             AK
Sbjct: 209 LK----QQVMSIVTDSTPLEEPKNPDNNIAKLYALFANIEKQNEMKEKFLAGNYGYGHAK 264

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLI 356
             +   I        E  +      +  +  +        +I+  +V     ++ L+
Sbjct: 265 TELLNAILEYFGNAREKREELAQNTKYVEEILQEGARKARAIASKKVQEAKEIVGLL 321


>gi|164423866|ref|XP_958548.2| tyrosyl-tRNA synthetase [Neurospora crassa OR74A]
 gi|157070264|gb|EAA29312.2| tyrosyl-tRNA synthetase [Neurospora crassa OR74A]
          Length = 404

 Score = 51.0 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 41/232 (17%), Positives = 82/232 (35%), Gaps = 36/232 (15%)

Query: 18  IHQISNPRELDILCSQGVV-TAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGG 76
           + +I NP  ++ +  +G     Y G        H G+L   + +  L   G   I L+  
Sbjct: 37  LAEILNPEIIEKVIDEGRAPRIYWG----RP--HCGYLVPAIKIAQLLAAGCHVIVLLAD 90

Query: 77  GTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK---YGTGKTDALMLNNETWLC 133
             +++   + +         + +    +  +   ++ +K     T K + ++ ++     
Sbjct: 91  IHAVL--DNLKS------TVELVGYRAKYYERTITALLKAVGVPTDKLEFVLGSSYQ--- 139

Query: 134 SIKYIDLLREIGSFFSV-----NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             K  D + ++    ++      +    E V+        LS L   Y ILQ  D   L 
Sbjct: 140 --KSPDYIMDVYKLATLVSEHDAKKAGAEVVKQ--SDNAPLSGL--LYPILQVLDEEYLK 193

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
                  Q GG DQ        D   RL   +   + +P++    G+KM  +
Sbjct: 194 ----VDAQFGGVDQRKLFAAAKDWLPRLGYKERAHIMNPMVPGLQGSKMSSS 241


>gi|114555400|ref|XP_001164458.1| PREDICTED: tyrosyl-tRNA synthetase isoform 9 [Pan troglodytes]
          Length = 525

 Score = 51.0 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 43/230 (18%), Positives = 70/230 (30%), Gaps = 23/230 (10%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R    ++    +L  +  +  +  Y G   T    H  +   +  +    K G +  
Sbjct: 13  LITRNL-QEVLGEEKLKEILKERELKIYWGTATTGKP-HVAYFVPMSKIADFLKAGCEVT 70

Query: 72  SLMGGGTSII---GDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
            L     + +     P    E R       I+  +E I       +K+  G         
Sbjct: 71  ILFADLHAYLDNMKAPWELLELRVSYYENVIKAMLESIGVPLEK-LKFIKGTDYQ----- 124

Query: 129 ETWLCSIKYIDLLREIGSFFSV-NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
              L     +D+ R         ++    E V+   + E  L      Y  LQA D   L
Sbjct: 125 ---LSKEYTLDVYRLSSVVTQHDSKKAGAEVVK---QVEHPL-LSGLLYPGLQALDEEYL 177

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
                   Q GG DQ             L   K   L +P++   +G+KM
Sbjct: 178 K----VDAQFGGVDQRKIFTFAEKYLPALGYSKRVHLMNPMVPGLTGSKM 223


>gi|1184699|gb|AAB39406.1| tyrosyl-tRNA synthetase [Homo sapiens]
          Length = 388

 Score = 51.0 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 43/230 (18%), Positives = 70/230 (30%), Gaps = 23/230 (10%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R    ++    +L  +  +  +  Y G   T    H  +   +  +    K G +  
Sbjct: 13  LITRNL-QEVLGEEKLKEILKERELKIYWGTATTGKP-HVAYFVPMSKIADFLKAGCEVT 70

Query: 72  SLMGGGTSII---GDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
            L     + +     P    E R       I+  +E I       +K+  G         
Sbjct: 71  ILFADLHAYLDNMKAPWELLELRVSYYENVIKAMLESIGVPLEK-LKFIKGTDYQ----- 124

Query: 129 ETWLCSIKYIDLLREIGSFFSV-NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
              L     +D+ R         ++    E V+   + E  L      Y  LQA D   L
Sbjct: 125 ---LSKEYTLDVYRLSSVVTQHDSKKAGAEVVK---QVEHPL-LSGLLYPGLQALDEEYL 177

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
                   Q GG DQ             L   K   L +P++   +G+KM
Sbjct: 178 K----VDAQFGGIDQRKIFTFAEKYLPALGYSKRVHLMNPMVPGLTGSKM 223


>gi|53722884|ref|YP_111869.1| tryptophanyl-tRNA synthetase II [Burkholderia pseudomallei K96243]
 gi|76818779|ref|YP_336114.1| tryptophanyl-tRNA synthetase II [Burkholderia pseudomallei 1710b]
 gi|167743699|ref|ZP_02416473.1| tryptophanyl-tRNA synthetase II [Burkholderia pseudomallei 14]
 gi|167820890|ref|ZP_02452570.1| tryptophanyl-tRNA synthetase II [Burkholderia pseudomallei 91]
 gi|167829244|ref|ZP_02460715.1| tryptophanyl-tRNA synthetase II [Burkholderia pseudomallei 9]
 gi|167850717|ref|ZP_02476225.1| tryptophanyl-tRNA synthetase II [Burkholderia pseudomallei B7210]
 gi|167907654|ref|ZP_02494859.1| tryptophanyl-tRNA synthetase II [Burkholderia pseudomallei NCTC
           13177]
 gi|226195696|ref|ZP_03791283.1| tryptophan--tRNA ligase [Burkholderia pseudomallei Pakistan 9]
 gi|254263184|ref|ZP_04954049.1| tryptophan--tRNA ligase [Burkholderia pseudomallei 1710a]
 gi|254301081|ref|ZP_04968525.1| tryptophanyl-tRNA synthetase [Burkholderia pseudomallei 406e]
 gi|52213298|emb|CAH39341.1| tryptophanyl-tRNA synthetase [Burkholderia pseudomallei K96243]
 gi|76583252|gb|ABA52726.1| tryptophanyl-tRNA synthetase [Burkholderia pseudomallei 1710b]
 gi|157810715|gb|EDO87885.1| tryptophanyl-tRNA synthetase [Burkholderia pseudomallei 406e]
 gi|225932181|gb|EEH28181.1| tryptophan--tRNA ligase [Burkholderia pseudomallei Pakistan 9]
 gi|254214186|gb|EET03571.1| tryptophan--tRNA ligase [Burkholderia pseudomallei 1710a]
          Length = 346

 Score = 51.0 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 44/293 (15%), Positives = 89/293 (30%), Gaps = 45/293 (15%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
            T + LH GH    +      +  H+   L+    ++  +    D+ RR      + E  
Sbjct: 20  PTGA-LHLGHYIGSLKTRIALQDTHRQFILVADTQALTDNAHDPDKVRR-----NVIEVA 73

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR- 162
                +          ++   + +    L  +     L  +            + + +R 
Sbjct: 74  LDYLAVG-----IDPRRSTIAVQSGLPALAELTLF-YLNFVTVARLERNPTIKDEIHARG 127

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT---- 218
             R+    FL   Y + QA D      +    + +G  DQ   I    ++  R+      
Sbjct: 128 FGRDIPAGFL--CYPVAQAADITAFKAD---TVPVG-DDQLPLIEQTNEIVRRVNRQAGA 181

Query: 219 ---PKLFALTSPL--LTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYW------RNIDD 266
              P+  AL SP   L    G  KM K+   AI L+    +  +  +          + D
Sbjct: 182 DVLPEASALISPTGRLPGVDGKAKMSKSQGNAIALSSSPDAIADAVRRMYTDPNHLRVSD 241

Query: 267 ------ADVVSFAKRLTTLPMSEIDRMAKLQGKEI---NEAKKIIATEITTMV 310
                   V ++          E++R+              K+ +   +  ++
Sbjct: 242 PGTVEGNVVFTYLDAF-DGEPDELERLKAAYRAGGLGDMVLKRRLEDRLQALI 293


>gi|114555392|ref|XP_524651.2| PREDICTED: tyrosyl-tRNA synthetase isoform 11 [Pan troglodytes]
 gi|114555394|ref|XP_001164171.1| PREDICTED: tyrosyl-tRNA synthetase isoform 4 [Pan troglodytes]
 gi|114555396|ref|XP_001164426.1| PREDICTED: tyrosyl-tRNA synthetase isoform 8 [Pan troglodytes]
 gi|114555398|ref|XP_001164500.1| PREDICTED: tyrosyl-tRNA synthetase, cytoplasmic isoform 10 [Pan
           troglodytes]
          Length = 528

 Score = 51.0 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 43/230 (18%), Positives = 70/230 (30%), Gaps = 23/230 (10%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R    ++    +L  +  +  +  Y G   T    H  +   +  +    K G +  
Sbjct: 13  LITRNL-QEVLGEEKLKEILKERELKIYWGTATTGKP-HVAYFVPMSKIADFLKAGCEVT 70

Query: 72  SLMGGGTSII---GDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
            L     + +     P    E R       I+  +E I       +K+  G         
Sbjct: 71  ILFADLHAYLDNMKAPWELLELRVSYYENVIKAMLESIGVPLEK-LKFIKGTDYQ----- 124

Query: 129 ETWLCSIKYIDLLREIGSFFSV-NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
              L     +D+ R         ++    E V+   + E  L      Y  LQA D   L
Sbjct: 125 ---LSKEYTLDVYRLSSVVTQHDSKKAGAEVVK---QVEHPL-LSGLLYPGLQALDEEYL 177

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
                   Q GG DQ             L   K   L +P++   +G+KM
Sbjct: 178 K----VDAQFGGVDQRKIFTFAEKYLPALGYSKRVHLMNPMVPGLTGSKM 223


>gi|170034286|ref|XP_001845005.1| tryptophanyl-tRNA synthetase [Culex quinquefasciatus]
 gi|167875638|gb|EDS39021.1| tryptophanyl-tRNA synthetase [Culex quinquefasciatus]
          Length = 416

 Score = 51.0 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 20/124 (16%), Positives = 44/124 (35%), Gaps = 12/124 (9%)

Query: 12  LSERGFIHQISNPRELDILCSQGVV-TAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           L  RG      +   L  +   G     Y G   ++ S+H GHL   ++  WLQ+    P
Sbjct: 72  LIRRGIFFSHRDLHTLLNMVEAGKKFYLYTGRGPSSDSMHLGHLVPFIVTKWLQEAFDVP 131

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           + +              D+ + + +   ++++++  +      I  G       +  N  
Sbjct: 132 LVI-----------QLTDDEKTLWKDLTVEQSMKMARENAKDIIAIGFDVNKTFIFANLD 180

Query: 131 WLCS 134
           ++  
Sbjct: 181 YMGR 184


>gi|260944778|ref|XP_002616687.1| hypothetical protein CLUG_03928 [Clavispora lusitaniae ATCC 42720]
 gi|238850336|gb|EEQ39800.1| hypothetical protein CLUG_03928 [Clavispora lusitaniae ATCC 42720]
          Length = 468

 Score = 51.0 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 21/108 (19%), Positives = 41/108 (37%), Gaps = 8/108 (7%)

Query: 299 KKIIATEITTMVHGREEAEKAATA-------AMECFDMSIHSQHMPTISISKDEVSRGMG 351
           +K  A + T   HG    E+           ++   D S+    +    +     +    
Sbjct: 44  QKWTAKQETRAYHGEHLTERRWKTLFNPSLESVAQLDASLKGVDVAPTPMPLQTFAALEK 103

Query: 352 LLT-LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
            L   + ++ FA+S  +AR  +K+  +K+N   I +    +K  D  S
Sbjct: 104 RLEFALFRSMFASSVRQAREFIKNGHVKVNGVTIKHPAFPLKSGDIFS 151


>gi|312622913|ref|YP_004024526.1| tryptophanyl-tRNA synthetase [Caldicellulosiruptor kronotskyensis
           2002]
 gi|312203380|gb|ADQ46707.1| tryptophanyl-tRNA synthetase [Caldicellulosiruptor kronotskyensis
           2002]
          Length = 325

 Score = 51.0 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 32/175 (18%), Positives = 62/175 (35%), Gaps = 31/175 (17%)

Query: 160 RSRLKREQSLSFLEFN-YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK- 217
           + R  +E++++   F  Y  LQA D +     Y       G DQ  ++    ++  R   
Sbjct: 112 QMRELKERNIATYGFLGYPCLQAADILI----YKAEFVPVGEDQLPHLELTREIARRFNF 167

Query: 218 -------TPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNI------ 264
                   P+    T  +L    G KM K+    I L++++    +  +   N+      
Sbjct: 168 LYGQTFPEPQAILNTVRVLVGTDGRKMSKSYGNTIALSEDL---ESVRKKVMNMVTDPAR 224

Query: 265 --------DDA-DVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMV 310
                    D   V ++ +  +   +SE +   K       E KK +   I+  +
Sbjct: 225 IRKNDPGHPDVCTVFAYHQIFSPEIVSETEENCKQGKIGCVECKKRLFENISRFL 279


>gi|300728207|ref|ZP_07061576.1| tryptophan--tRNA ligase [Prevotella bryantii B14]
 gi|299774546|gb|EFI71169.1| tryptophan--tRNA ligase [Prevotella bryantii B14]
          Length = 362

 Score = 51.0 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 59/352 (16%), Positives = 103/352 (29%), Gaps = 62/352 (17%)

Query: 44  LTASSLHAGHLTQ-LMLLFWLQKTGH--KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    L     LQ  G   K    M    ++  +    ++ R+        
Sbjct: 11  PTGK-LHLGHYVGSLRRRVQLQNEGDYDKMFVFMADVQALTDNADNPEKIRQ-------- 61

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
             IE      S+ +     K    + +    L  +    +     S    N  +  E   
Sbjct: 62  NIIEVALDYLSAGLD--PAKCTLYIQSQIPELAELTTYLMNLITVSRVQRNPTVKTEIKM 119

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
              +    L F  F Y + QA D           +  G  DQ   +    +L  R     
Sbjct: 120 RNFEANIPLGF--FCYPVSQAADIAAFKA---TTVPAG-EDQEPMLEVTRELVRRFNQTY 173

Query: 221 LFALTSP------------LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYW------R 262
              L  P            L  T    KM K+L   I+L+ +  + ++  +         
Sbjct: 174 ADVLVEPNILLPENATARRLPGTDGKEKMSKSLGNCIYLSDDKDTVWSKVKSMYTDPTHV 233

Query: 263 NIDD------ADVVSFAKRLT-----------TLPMSEIDRMAKLQGKEINEAKKIIATE 305
           N+ D        V ++    +              + E+       G    + KK++   
Sbjct: 234 NVSDPGHVEGNAVFTYLDAFSTDEDFAEFWPEFQNLDELKAAYTAGGIGDMKCKKLLNNV 293

Query: 306 ITTMV-----HGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGL 352
           I  M+       RE  +            SI ++ +   ++  DEV + M +
Sbjct: 294 INKMLDPIRARRREYEQDIPEIYNILKKGSIAAREVAAQTM--DEVKKAMQI 343


>gi|296207378|ref|XP_002750628.1| PREDICTED: tyrosyl-tRNA synthetase, cytoplasmic [Callithrix
           jacchus]
          Length = 528

 Score = 51.0 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 43/231 (18%), Positives = 70/231 (30%), Gaps = 23/231 (9%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            L  R    ++    +L  +  +  +  Y G   T    H  +   +  +    K G + 
Sbjct: 12  QLITRNL-QEVLGEEKLKEILKERELKIYWGTATTGKP-HVAYFVPMSKIADFLKAGCEV 69

Query: 71  ISLMGGGTSII---GDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
             L     + +     P    E R       I+  +E I       +K+  G        
Sbjct: 70  TILFADLHAYLDNMKAPWELLELRVSYYENVIKAMLESIGVPLEK-LKFIKGTDYQ---- 124

Query: 128 NETWLCSIKYIDLLREIGSFFSV-NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
               L     +D+ R         ++    E V+   + E  L      Y  LQA D   
Sbjct: 125 ----LSKEYTLDVYRLSSMVTQHDSKKAGAEVVK---QVEHPL-LSGLLYPGLQALDEEY 176

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
           L        Q GG DQ             L   K   L +P++   +G+KM
Sbjct: 177 LK----VDAQFGGIDQRKIFTFAEKYLPALGYSKRVHLMNPMVPGLTGSKM 223


>gi|323340518|ref|ZP_08080773.1| tryptophan--tRNA ligase [Lactobacillus ruminis ATCC 25644]
 gi|323092062|gb|EFZ34679.1| tryptophan--tRNA ligase [Lactobacillus ruminis ATCC 25644]
          Length = 340

 Score = 51.0 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 54/346 (15%), Positives = 113/346 (32%), Gaps = 49/346 (14%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     +Q TG + P  ++    ++       D +R     ++I+ 
Sbjct: 12  PTGK-LHIGHYVGSLKNRVEMQNTGKYTPYIMIADQQAL------TDNAR---DPEKIKN 61

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
           ++ ++  +    +     K+   + +    L  +    L     S    N  +  E  + 
Sbjct: 62  SLIQV-ALDYLAVGLDPKKSTIFVQSQIPALAELNLYYLNLVTVSRLERNPTVKAEIQQK 120

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKL 221
             +R     F  F Y + QA D       Y   + +G  DQ   +    ++     +   
Sbjct: 121 NFERSIPAGF--FTYPVSQAADITAFKAKY---VPVG-DDQEPMLEQAREIVRSFNSIYG 174

Query: 222 FALTSP----------LLTTASGT-KMGKTLSGAIWLNKE----MTSPYNFWQYWRNIDD 266
             L  P           L    G  KM K+L   I+L+ +         + +    +I  
Sbjct: 175 EVLVEPEGVFPKKGSGRLPGLDGNAKMSKSLGNCIYLSDDADTLKKKVMSMYTDPNHIHV 234

Query: 267 AD--------VVSFAKRLTTLPMSEIDRMAKLQGKEINEAK------KIIATEITTMVHG 312
            D        V ++     +      D   + Q   + + K      +++  E+  +   
Sbjct: 235 EDPGQVEGNMVFAYLDIFDSDKEHVADLKERYQAGGLGDVKIKRYLNEVLEAELGPIRER 294

Query: 313 REEAEKAATAAME-CFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
           R E EK   A  +   D S  +  +   ++ +   + G+    ++ 
Sbjct: 295 RAEFEKDIPAVYQMLKDGSDKANEVANQTLEEVRAAIGVNYFDILK 340


>gi|4507947|ref|NP_003671.1| tyrosyl-tRNA synthetase, cytoplasmic [Homo sapiens]
 gi|13638438|sp|P54577|SYYC_HUMAN RecName: Full=Tyrosyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Tyrosyl--tRNA ligase; Short=TyrRS
 gi|2665519|gb|AAB88409.1| tyrosyl-tRNA synthetase [Homo sapiens]
 gi|12804961|gb|AAH01933.1| Tyrosyl-tRNA synthetase [Homo sapiens]
 gi|13278750|gb|AAH04151.1| Tyrosyl-tRNA synthetase [Homo sapiens]
 gi|16741793|gb|AAH16689.1| Tyrosyl-tRNA synthetase [Homo sapiens]
 gi|119627911|gb|EAX07506.1| tyrosyl-tRNA synthetase, isoform CRA_a [Homo sapiens]
 gi|119627912|gb|EAX07507.1| tyrosyl-tRNA synthetase, isoform CRA_a [Homo sapiens]
 gi|123981526|gb|ABM82592.1| tyrosyl-tRNA synthetase [synthetic construct]
 gi|123996355|gb|ABM85779.1| tyrosyl-tRNA synthetase [synthetic construct]
 gi|193785013|dbj|BAG54166.1| unnamed protein product [Homo sapiens]
          Length = 528

 Score = 51.0 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 43/230 (18%), Positives = 70/230 (30%), Gaps = 23/230 (10%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R    ++    +L  +  +  +  Y G   T    H  +   +  +    K G +  
Sbjct: 13  LITRNL-QEVLGEEKLKEILKERELKIYWGTATTGKP-HVAYFVPMSKIADFLKAGCEVT 70

Query: 72  SLMGGGTSII---GDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
            L     + +     P    E R       I+  +E I       +K+  G         
Sbjct: 71  ILFADLHAYLDNMKAPWELLELRVSYYENVIKAMLESIGVPLEK-LKFIKGTDYQ----- 124

Query: 129 ETWLCSIKYIDLLREIGSFFSV-NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
              L     +D+ R         ++    E V+   + E  L      Y  LQA D   L
Sbjct: 125 ---LSKEYTLDVYRLSSVVTQHDSKKAGAEVVK---QVEHPL-LSGLLYPGLQALDEEYL 177

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
                   Q GG DQ             L   K   L +P++   +G+KM
Sbjct: 178 K----VDAQFGGIDQRKIFTFAEKYLPALGYSKRVHLMNPMVPGLTGSKM 223


>gi|50548779|ref|XP_501859.1| YALI0C15224p [Yarrowia lipolytica]
 gi|49647726|emb|CAG82172.1| YALI0C15224p [Yarrowia lipolytica]
          Length = 393

 Score = 51.0 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 36/240 (15%), Positives = 83/240 (34%), Gaps = 26/240 (10%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            L  R    ++ N + +     +  +  Y G   T    H G+   +  +      G + 
Sbjct: 10  DLISRNL-QEVLNKQIILDTLKERELKIYWGTAPTGKP-HCGYFVPMTKIADFLAAGCEV 67

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK---YGTGKTDALMLN 127
             L+    + +      D  +  +  + +Q  ++  + +  + ++       K   ++  
Sbjct: 68  KILLADLHAFL------DNMKAPL--ELVQHRVQYYEYMIKAILRSIGVPLDKLTFVIGR 119

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRM--LSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
           +   L +   +DL + + +  SVN       + V+   + +  L      Y ++QA D  
Sbjct: 120 SFE-LSAEYTMDLFK-LSNRVSVNDAKRAGADVVK---QVDNPL-LSGLIYPLMQALDEE 173

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGA 244
            L        Q GG DQ    +   +    +   K   + +P++     G KM  +   +
Sbjct: 174 YL----GVDAQFGGVDQRKIFVLAEENLTSIGYKKRAHMMNPMVPGLTQGGKMSASDPNS 229


>gi|332254613|ref|XP_003276424.1| PREDICTED: tyrosyl-tRNA synthetase, cytoplasmic-like [Nomascus
           leucogenys]
          Length = 528

 Score = 50.6 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 43/230 (18%), Positives = 70/230 (30%), Gaps = 23/230 (10%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R    ++    +L  +  +  +  Y G   T    H  +   +  +    K G +  
Sbjct: 13  LITRNL-QEVLGEEKLKEILKERELKIYWGTATTGKP-HVAYFVPMSKIADFLKAGCEVT 70

Query: 72  SLMGGGTSII---GDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
            L     + +     P    E R       I+  +E I       +K+  G         
Sbjct: 71  ILFADLHAYLDNMKAPWELLELRVSYYENVIKAMLESIGVPLEK-LKFIKGTDYQ----- 124

Query: 129 ETWLCSIKYIDLLREIGSFFSV-NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
              L     +D+ R         ++    E V+   + E  L      Y  LQA D   L
Sbjct: 125 ---LSKEYTLDVYRLSSVVTQHDSKKAGAEVVK---QVEHPL-LSGLLYPGLQALDEEYL 177

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
                   Q GG DQ             L   K   L +P++   +G+KM
Sbjct: 178 K----VDAQFGGVDQRKIFTFAEKYLPALGYSKRVHLMNPMVPGLTGSKM 223


>gi|261878969|ref|ZP_06005396.1| tryptophan-tRNA ligase [Prevotella bergensis DSM 17361]
 gi|270334425|gb|EFA45211.1| tryptophan-tRNA ligase [Prevotella bergensis DSM 17361]
          Length = 363

 Score = 50.6 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 49/298 (16%), Positives = 83/298 (27%), Gaps = 56/298 (18%)

Query: 44  LTASSLHAGHLTQ-LMLLFWLQKTGH--KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    L     LQ  G   +    M    ++  +    ++ R+ M    + 
Sbjct: 11  PTGK-LHLGHYVGSLRRRVQLQNEGDYDRMFVFMADVQALTDNADDPEKIRQNMMEVALD 69

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNR-MLSFESV 159
                +             K    + +    L  +     L  I S   V R       V
Sbjct: 70  YLSAGL----------DPEKCTIYIQSRIPELAELTT--YLMNIVSVSRVQRNPTVKTEV 117

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
           + R     S+    F Y + QA D           +  G  DQ   +    +L  R    
Sbjct: 118 KMRGFENNSIPLGFFCYPVSQAADIAAFKA---TTVPAG-EDQEPMLELARELVNRFNQT 173

Query: 220 KLFALTSP------------LLTTASGTKMGKTLSGAIWLNKEMTSPYN----FWQ--YW 261
               L  P            L  T    KM K+L   I+L+ +  + +      +     
Sbjct: 174 YAPVLVEPNIMLPENAKARRLPGTDGKEKMSKSLGNCIFLSDDADTVWKKVKGMYTDPTH 233

Query: 262 RNIDD------ADVVSFAKRLT-----------TLPMSEIDRMAKLQGKEINEAKKII 302
            N+ D        V ++    +              + E+       G    + KK++
Sbjct: 234 LNVSDPGHVEGNAVFTYLDAFSNDQDFADFWPDFANLDELKAAYTAGGIGDMKCKKLL 291


>gi|254250638|ref|ZP_04943957.1| Tryptophanyl-tRNA synthetase [Burkholderia cenocepacia PC184]
 gi|124879772|gb|EAY67128.1| Tryptophanyl-tRNA synthetase [Burkholderia cenocepacia PC184]
          Length = 337

 Score = 50.6 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 51/341 (14%), Positives = 107/341 (31%), Gaps = 50/341 (14%)

Query: 45  TASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIE 104
           T   LH GH    +      +       L+    ++       +  RR   ++ + E   
Sbjct: 16  TGP-LHLGHYIGSLRARVQMQHEATQFLLLADTQALTD-----NMGRRQRVTENVIEVAL 69

Query: 105 KIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-L 163
               +           +  ++ +    L  +    LL  +            E +R R  
Sbjct: 70  DYLAVG-----IDPAISTIVVQSQVPELAELSQY-LLNLVTVARLERNPTIKEEIRLRGF 123

Query: 164 KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP---- 219
           +R+    FL   Y + QA D       +   + +G  DQ   I    +L  R        
Sbjct: 124 ERDIPAGFL--TYPVSQAADITAFKATH---VPVG-DDQLPMIEQTNELVRRFNATVEQP 177

Query: 220 -----KLFALTSPLLTTASGT-KMGKTLSGAIWL----NKEMTSPYNFWQ--YWRNIDDA 267
                +        L    G  KM K+L  AI L    ++   +  + +       + D 
Sbjct: 178 VLVECEAVLSAVTRLPGIDGKAKMSKSLGNAITLGSTPDEIAQAVKDMYTDPNHLRVSDP 237

Query: 268 DVVSFAKRLTTLP--------MSEIDRMAKLQGKEINEAKKIIATEITTMV------HGR 313
             V      T L         + E+    +  G   +  K+++   +  ++         
Sbjct: 238 GQVEGNVVFTFLDAFEPDVAKVDELKAHYRRGGLGDSVVKRVLNERLQALIEPIRTRRRE 297

Query: 314 EEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLT 354
            EA+KA   A+     ++H++ +   ++++ + + G+    
Sbjct: 298 FEADKAEVMAI-LKRGTLHAREVAGATLAEVKGAMGLTYFD 337


>gi|115360424|ref|YP_777561.1| tryptophanyl-tRNA synthetase II [Burkholderia ambifaria AMMD]
 gi|115285752|gb|ABI91227.1| tryptophanyl-tRNA synthetase [Burkholderia ambifaria AMMD]
          Length = 337

 Score = 50.6 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 51/341 (14%), Positives = 107/341 (31%), Gaps = 50/341 (14%)

Query: 45  TASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIE 104
           T   LH GH    +      +       L+    ++       +  RR   ++ + E   
Sbjct: 16  TGP-LHLGHYIGSLRARVQMQHEATQFLLLADTQALTD-----NMGRRQRVTENVIEVAL 69

Query: 105 KIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-L 163
               +           +  ++ +    L  +    LL  +            E +R R  
Sbjct: 70  DYLAVG-----IDPAISTIVVQSQVPELAELSQY-LLNLVTVARLERNPTIKEEIRLRGF 123

Query: 164 KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP---- 219
           +R+    FL   Y + QA D       +   + +G  DQ   I    +L  R        
Sbjct: 124 ERDIPAGFL--TYPVSQAADITAFKATH---VPVG-DDQLPMIEQTNELVRRFNATVDKP 177

Query: 220 -----KLFALTSPLLTTASGT-KMGKTLSGAIWL----NKEMTSPYNFWQ--YWRNIDDA 267
                +        L    G  KM K+L  AI L    ++   +  + +       + D 
Sbjct: 178 VLVECEAVLSAVTRLPGIDGKAKMSKSLGNAITLGSTPDEIAQAVKDMYTDPNHLRVSDP 237

Query: 268 DVVSFAKRLTTLP--------MSEIDRMAKLQGKEINEAKKIIATEITTMV------HGR 313
             V      T L         + E+    +  G   +  K+++   +  ++         
Sbjct: 238 GQVEGNVVFTFLDAFEPDVSKVDELKAHYRRGGLGDSVVKRVLNERLQALIEPIRARRRE 297

Query: 314 EEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLT 354
            EA+KA   A+     ++H++ +   ++++ + + G+    
Sbjct: 298 FEADKAEVMAI-LKRGTLHAREVAGATLAEVKGAMGLTYFD 337


>gi|297828964|ref|XP_002882364.1| tRNA synthetase class I family protein [Arabidopsis lyrata subsp.
           lyrata]
 gi|297328204|gb|EFH58623.1| tRNA synthetase class I family protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 402

 Score = 50.6 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 58/336 (17%), Positives = 99/336 (29%), Gaps = 53/336 (15%)

Query: 15  RGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +  E+     +G     Y G   ++ +LH GHL   M   +LQ+    P+ +
Sbjct: 67  RGVFFAHRDFNEILDAYEKGDKFYLYTGRGPSSEALHLGHLIPFMFTKYLQEAFKVPLVI 126

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                      +   E  + +  +  ++ I     +  +FI             N     
Sbjct: 127 QLTDDEKCMWKNLSVEESQRLARENAKDIIACGFDVTKTFIFSDFDYVGGAFYKN----- 181

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY-----DFVELA 188
                  +  +    ++N+ +           E  +  L F    +QA       F  L 
Sbjct: 182 -------MVRVAKCVTLNKAMG--IFG--FSGEDHIGKLSF--PPVQAVPSFPSSFPHLF 228

Query: 189 ---KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFAL---TSPLLTTASGTKMGKTLS 242
               N  C +     DQ        D+  RL   K   +     P L   +G KM  +  
Sbjct: 229 PGKDNLRCLIPC-AIDQDPYFRMTRDVAPRLGYSKPALIESSFFPALQGENG-KMSASDP 286

Query: 243 G-AIWL-NKEMTSPYNFWQYWRNIDDADVVSFAKR------------LT-TLPMSEIDRM 287
             AI++ +          +Y  +     V    +             L+  L        
Sbjct: 287 NSAIYVTDTAKDIKNKINRYAFSGGQDSVEKHRELGANLEVDIPVKYLSFFLEDDSELEH 346

Query: 288 AKLQGKEIN----EAKKIIATEITTMV--HGREEAE 317
            K +  E      E KK +   +T MV  H R  A 
Sbjct: 347 IKKEYGEGRMLTGEVKKRLTEVLTEMVERHRRARAA 382


>gi|254493515|ref|ZP_05106686.1| tryptophanyl-tRNA synthetase [Neisseria gonorrhoeae 1291]
 gi|226512555|gb|EEH61900.1| tryptophanyl-tRNA synthetase [Neisseria gonorrhoeae 1291]
          Length = 336

 Score = 50.6 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 37/201 (18%), Positives = 57/201 (28%), Gaps = 42/201 (20%)

Query: 174 FNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSP------ 227
           F+Y IL   D +    N +  +   G DQ  ++    D+  R         T P      
Sbjct: 136 FSYPILMTADILMFNAN-EVPV---GRDQIQHVEMARDIAGRFNHRFQELFTLPEVKIDE 191

Query: 228 ---LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWR---------NIDDAD-VVSFAK 274
              LL    G KM K+    I L +                         D   +    K
Sbjct: 192 NVELLVGLDGRKMSKSYGNTIPLWENDKKTQKSVNKIITNMKEPGEPKQPDESPLFEIYK 251

Query: 275 RLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHG-------------------REE 315
             +T   +         G    EAKK++A +I   +                     +  
Sbjct: 252 AFSTPSETAEFTQVLADGLAWGEAKKLLAAKINAELAELRERYNALTSNPSQIEEILQAG 311

Query: 316 AEKAATAAMECFDMSIHSQHM 336
           A+KA   A E  D    +  +
Sbjct: 312 AQKARKEARELLDKVRDAVGI 332


>gi|107022965|ref|YP_621292.1| tryptophanyl-tRNA synthetase II [Burkholderia cenocepacia AU 1054]
 gi|116686792|ref|YP_840039.1| tryptophanyl-tRNA synthetase II [Burkholderia cenocepacia HI2424]
 gi|105893154|gb|ABF76319.1| tryptophanyl-tRNA synthetase [Burkholderia cenocepacia AU 1054]
 gi|116652507|gb|ABK13146.1| tryptophanyl-tRNA synthetase [Burkholderia cenocepacia HI2424]
          Length = 337

 Score = 50.6 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 51/341 (14%), Positives = 107/341 (31%), Gaps = 50/341 (14%)

Query: 45  TASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIE 104
           T   LH GH    +      +       L+    ++       +  RR   ++ + E   
Sbjct: 16  TGP-LHLGHYIGSLRARVQMQHEATQFLLLADTQALTD-----NMGRRQRVTENVIEVAL 69

Query: 105 KIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-L 163
               +           +  ++ +    L  +    LL  +            E +R R  
Sbjct: 70  DYLAVG-----IDPAISTIVVQSQVPELAELSQY-LLNLVTVARLERNPTIKEEIRLRGF 123

Query: 164 KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP---- 219
           +R+    FL   Y + QA D       +   + +G  DQ   I    +L  R        
Sbjct: 124 ERDIPAGFL--TYPVSQAADITAFKATH---VPVG-DDQLPMIEQTNELVRRFNATVEQP 177

Query: 220 -----KLFALTSPLLTTASGT-KMGKTLSGAIWL----NKEMTSPYNFWQ--YWRNIDDA 267
                +        L    G  KM K+L  AI L    ++   +  + +       + D 
Sbjct: 178 VLVECEAVLSAVTRLPGIDGKAKMSKSLGNAITLGSTPDEIAQAVKDMYTDPNHLRVSDP 237

Query: 268 DVVSFAKRLTTLP--------MSEIDRMAKLQGKEINEAKKIIATEITTMV------HGR 313
             V      T L         + E+    +  G   +  K+++   +  ++         
Sbjct: 238 GQVEGNVVFTFLDAFEPDVAKVDELKAHYRRGGLGDSVVKRVLNERLQALIEPIRTRRRE 297

Query: 314 EEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLT 354
            EA+KA   A+     ++H++ +   ++++ + + G+    
Sbjct: 298 FEADKAEVMAI-LKRGTLHAREVAGATLAEVKGAMGLTYFD 337


>gi|301772980|ref|XP_002921903.1| PREDICTED: tyrosyl-tRNA synthetase, cytoplasmic-like [Ailuropoda
           melanoleuca]
          Length = 565

 Score = 50.6 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 43/230 (18%), Positives = 69/230 (30%), Gaps = 23/230 (10%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R    ++    +L  +  +  +  Y G   T    H  +   +  +    K G +  
Sbjct: 50  LITRNL-QEVLGEEKLKEVLKERELKVYWGTATTGKP-HVAYFVPMSKIADFLKAGCEVT 107

Query: 72  SLMGGGTSII---GDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
            L     + +     P    E R       I+  +E I       +K+  G         
Sbjct: 108 ILFADLHAYLDNMKAPWELLELRTNYYENVIKAMLESIGVPLEK-LKFVKGTDYQ----- 161

Query: 129 ETWLCSIKYIDLLREIGSFFSV-NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
              L     +D+ R          +    E V+   + E  L      Y  LQA D   L
Sbjct: 162 ---LSKEYTLDVYRLSSVVTQHDAKKAGAEVVK---QVEHPL-LSGLLYPGLQALDEEYL 214

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
                   Q GG DQ             L   K   L +P++   +G+KM
Sbjct: 215 K----VDAQFGGVDQRKIFTFAEKYLPALGYSKRVHLMNPMVPGLTGSKM 260


>gi|73536482|ref|XP_847665.1| tryptophanyl-tRNA synthetase [Leishmania major strain Friedlin]
 gi|321438578|emb|CBZ12337.1| putative tryptophanyl-tRNA synthetase [Leishmania major strain
           Friedlin]
          Length = 480

 Score = 50.6 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 25/125 (20%), Positives = 42/125 (33%), Gaps = 12/125 (9%)

Query: 15  RGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +    LD          Y G   ++ S+H GHL   M   WLQ T H P+ +
Sbjct: 140 RGIFFSHRDLNLILDAYEKGQPFYLYTGRGPSSESMHVGHLIPFMFTKWLQDTFHVPLVI 199

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                 +  D  F  +    +  +EI +            I +G       +  +  ++ 
Sbjct: 200 -----QLTDDEKFFFKD---LTMEEIDKMT---TENLKDIIAFGFDPKLTFIFRDFEYVG 248

Query: 134 SIKYI 138
            +  I
Sbjct: 249 QMYRI 253


>gi|315650379|ref|ZP_07903450.1| tryptophan--tRNA ligase [Eubacterium saburreum DSM 3986]
 gi|315487306|gb|EFU77617.1| tryptophan--tRNA ligase [Eubacterium saburreum DSM 3986]
          Length = 361

 Score = 50.6 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 54/329 (16%), Positives = 96/329 (29%), Gaps = 68/329 (20%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN 102
            T   LH GH    +     LQ +G      +     ++ D      +  M   ++++E 
Sbjct: 11  PTGK-LHVGHYIGSLKRRVELQNSGEFKKIFI-----MVADAQ--ALTDNMENPEKVRE- 61

Query: 103 IEKIKGIFSSFIKY-----GTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFE 157
                 I    + Y        K+   + +    L  + +  +     S    N  +  E
Sbjct: 62  -----NIIEVVLDYLACGLDPEKSTMFIQSMVPELTELSFYYMNLVTVSRLQRNPTVKAE 116

Query: 158 SVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQ------------WGN 205
                 +    + F  F Y I QA D           + +G  DQ              N
Sbjct: 117 IGLRNFENSIPVGF--FTYPISQASDITAFKA---TTVPVG-EDQLPMIEQTREIVRKFN 170

Query: 206 IICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYW---- 261
            + G  L E        A    L  T    KM K+L   I+L+ +  +  +  +      
Sbjct: 171 SVYGETLVEPEALIPSEAAAKRLPGTDGKAKMSKSLGNCIYLSDDAKTVADAVKTMYTDP 230

Query: 262 --RNIDD------ADVVSFAKRLT-------TLP----MSEIDRMAKLQGKEINEAKKII 302
               + D        V ++ +  +        LP    + E+       G    + KK +
Sbjct: 231 LHIKVSDPGHLEGNTVFTYLEAFSKPEDFVKFLPEYKSLDELKEHYTRGGLGDMKVKKFL 290

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSI 331
           A  +       E+      A    F+  I
Sbjct: 291 ANVM-------EDTLAPIRARRAEFEKDI 312


>gi|257466270|ref|ZP_05630581.1| tryptophanyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC
           25563]
 gi|315917427|ref|ZP_07913667.1| tryptophanyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC
           25563]
 gi|313691302|gb|EFS28137.1| tryptophanyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC
           25563]
          Length = 326

 Score = 50.6 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 30/183 (16%), Positives = 53/183 (28%), Gaps = 32/183 (17%)

Query: 144 IGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQW 203
           + +   V  +    S + +L +  + +   FNY  L A D +     YD  +   G DQ 
Sbjct: 93  LCNVAPVGLLERAHSYKDKLAKGFTPNMGLFNYPALMAADILI----YDADVVPVGKDQK 148

Query: 204 GNIICGIDLGERLKTP---KLFALTSPLLT-------TASGTKMGKTLSGAI-WLNKEMT 252
            ++    D+  +         F L  PL+           G KM K+    I     +  
Sbjct: 149 QHLEMTRDIAAKFNQQYEVDFFKLPDPLIMDKVAVVPGTDGQKMSKSYGNTIQMFAPKKQ 208

Query: 253 SPYNFWQYWRNI------------DDADVVSFAKRLTTLPMS-EIDRMAKLQGKEINEAK 299
                 Q   +I             D ++         +    E+             AK
Sbjct: 209 LK----QQVMSIVTDSTPLEEPKNPDNNIAKLYALFANIEKQNEMKEKFLAGNYGYGHAK 264

Query: 300 KII 302
             +
Sbjct: 265 TEL 267


>gi|118475659|ref|YP_892487.1| tryptophanyl-tRNA synthetase [Campylobacter fetus subsp. fetus
           82-40]
 gi|261886443|ref|ZP_06010482.1| tryptophanyl-tRNA synthetase [Campylobacter fetus subsp. venerealis
           str. Azul-94]
 gi|118414885|gb|ABK83305.1| tryptophanyl-tRNA synthetase [Campylobacter fetus subsp. fetus
           82-40]
          Length = 323

 Score = 50.6 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 34/216 (15%), Positives = 64/216 (29%), Gaps = 32/216 (14%)

Query: 41  GYDLTASSLHAGHLTQ-LMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           G   +   LH G+    +  +   Q  G+  + +            F      M    E 
Sbjct: 6   GLQPSGK-LHLGNYFASIKPMVDTQNLGNDDMFM------------FIANYHAMTSVNEA 52

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLS-FES 158
           ++  E       +F+  G     +           ++   +L ++     V R  +  + 
Sbjct: 53  KKLKESTFEAACAFLALGIDPNKSTFWVQSDVKDVLELYWILSQLTPMGLVERAHAYKDK 112

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
           V    +    L    F+Y +L A D +    N    +   G DQ  ++    D+  +   
Sbjct: 113 VAKGFEAHHGL----FSYPVLMAADILLFNSN----IVPVGKDQIQHVEIARDIAIKFNN 164

Query: 219 PKLFALTSP---------LLTTASGTKMGKTLSGAI 245
                 T P          +    G KM K+    I
Sbjct: 165 AHGDIFTIPEAGVQQNVATVPGIDGAKMSKSYGNTI 200


>gi|26345546|dbj|BAC36424.1| unnamed protein product [Mus musculus]
          Length = 528

 Score = 50.6 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 43/230 (18%), Positives = 69/230 (30%), Gaps = 23/230 (10%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R    ++    +L  +  +  +  Y G   T    H  +   +  +    K G +  
Sbjct: 13  LITRNL-QEVLGEEKLKEILKERELKVYWGTATTGKP-HVAYFVPMSKIADFLKAGCEVT 70

Query: 72  SLMGGGTSII---GDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
            L     + +     P    E R       I+  +E I       +K+  G         
Sbjct: 71  ILFADLHAYLDNMKAPWELLELRTSYYENVIKAMLESIGVPLEK-LKFIKGTDYQ----- 124

Query: 129 ETWLCSIKYIDLLREIGSFFSV-NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
              L     +D+ R          +    E V+   + E  L      Y  LQA D   L
Sbjct: 125 ---LSKEYTLDVYRLSSVVTQHDAKKAGAEVVK---QVEHPL-LSGLLYPGLQALDEEYL 177

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
                   Q GG DQ             L   K   L +P++   +G+KM
Sbjct: 178 K----VDAQFGGVDQRKIFTFSEKYLPALGYSKRVHLMNPMVPGLTGSKM 223


>gi|134291098|ref|YP_001114867.1| tryptophanyl-tRNA synthetase II [Burkholderia vietnamiensis G4]
 gi|134134287|gb|ABO58612.1| tryptophanyl-tRNA synthetase [Burkholderia vietnamiensis G4]
          Length = 337

 Score = 50.6 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 51/341 (14%), Positives = 105/341 (30%), Gaps = 50/341 (14%)

Query: 45  TASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIE 104
           T   LH GH    +      +       L+    ++       +  RR   ++ + E   
Sbjct: 16  TGP-LHLGHYIGSLRARVQMQHDATQFLLLADTQALTD-----NMGRRQRVTENVIEVAL 69

Query: 105 KIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-L 163
               +           +  ++ +    L  +    LL  +            E +R R  
Sbjct: 70  DYLAVG-----IDPALSTIVVQSQVPELAELSQY-LLNLVTVARLERNPTIKEEIRLRGF 123

Query: 164 KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP---- 219
           +R+    FL   Y + QA D       +   + +G  DQ   I    +L  R        
Sbjct: 124 ERDIPAGFL--TYPVSQAADITAFKATH---VPVG-DDQLPMIEQTNELVRRFNATVEQP 177

Query: 220 -----KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSP----YNFWQ--YWRNIDDA 267
                +        L    G  KM K+L  AI L            + +       + D 
Sbjct: 178 VLVECEAVLSAVTRLPGIDGKAKMSKSLGNAITLGATPDEITRAVKDMYTDPNHLRVSDP 237

Query: 268 DVVSFAKRLTTLP--------MSEIDRMAKLQGKEINEAKKIIATEITTMV------HGR 313
             V      T L         + E+    +  G   +  K+++   +  ++         
Sbjct: 238 GQVEGNVVFTFLDAFEPDVQKVDELKAHYRRGGLGDSVVKRVLDERLQALIEPIRARRRE 297

Query: 314 EEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLT 354
            EA+KA   A+     ++H++ + + ++++ + + G+    
Sbjct: 298 FEADKAEVMAI-LKRGTMHARGVASTTLAQVKRAMGLTYFD 337


>gi|319790140|ref|YP_004151773.1| tryptophanyl-tRNA synthetase [Thermovibrio ammonificans HB-1]
 gi|317114642|gb|ADU97132.1| tryptophanyl-tRNA synthetase [Thermovibrio ammonificans HB-1]
          Length = 355

 Score = 50.6 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 48/325 (14%), Positives = 97/325 (29%), Gaps = 62/325 (19%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   T   +H G+    +  +   +   +    +    +I        E    +    +Q
Sbjct: 33  GMRPTGK-IHLGNYFGALKAWIELQDRAESFFFIADWHAITTSYHDTGE----LAENTVQ 87

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLL-------REIGSFFSVNRM 153
              + +             +   L + +  W+     + LL       R +    +   M
Sbjct: 88  MMADWLACGL-------DPEKSTLFVQS--WIKEHAELHLLLSMITPVRWLERNPTYKEM 138

Query: 154 LSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLG 213
           +  E+++ R             Y +LQ  D V     Y+      G DQ  ++    ++ 
Sbjct: 139 M--ENLKDRELATYGF----LGYPVLQTADIVL----YNADTVPVGIDQIPHLELSREIA 188

Query: 214 ERLKT--------PKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRN-I 264
            R           P+ +   +P L    G KM K+    I+L+          +   + +
Sbjct: 189 RRFNRFFGELFVEPRPYLSKAPKLPGLDGRKMSKSYGNCIYLSDSE---EEVNKKVMSMV 245

Query: 265 DDA--------------DVVSFAKRLTTLP-MSEIDRMAKLQGKEINEAKKIIATEITTM 309
            D                V ++ K  T    ++EI+   +       + K+ +A  +   
Sbjct: 246 TDPARVRKTDPGHPEVCSVYAYHKIFTPKERVAEIEEACRNGEIGCVQCKRELAKNLNAF 305

Query: 310 V----HGREEAEKAATAAMECFDMS 330
           +      R E      A ME F   
Sbjct: 306 LEPIRSKRAELLSNRKALMEVFKEG 330


>gi|261364439|ref|ZP_05977322.1| tryptophan--tRNA ligase [Neisseria mucosa ATCC 25996]
 gi|288567349|gb|EFC88909.1| tryptophan--tRNA ligase [Neisseria mucosa ATCC 25996]
          Length = 336

 Score = 50.6 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 43/226 (19%), Positives = 69/226 (30%), Gaps = 49/226 (21%)

Query: 166 EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALT 225
           +  +    ++Y IL   D +    N +  +   G DQ  ++    D+  R         T
Sbjct: 128 DHGVEMGLYSYPILMTADILMFNAN-EVPV---GRDQIQHVEMARDIAGRFNHRFKEVFT 183

Query: 226 SP---------LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWR---------NIDDA 267
            P         LL    G KM K+    I L +                         D 
Sbjct: 184 LPEVKIDENVELLVGLDGRKMSKSYGNTIPLWENDKKTQKSVNKIITNMKEPGEPKQPDE 243

Query: 268 D-VVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMEC 326
             +    K  +T   +        +G    EAKK++AT+I         AE A       
Sbjct: 244 SPLFEIYKAFSTSSETAAFTQMLAEGLAWGEAKKLLATKIN--------AELAEPRER-- 293

Query: 327 FDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHL 372
                            +E++     +  I++AG A +  EAR  L
Sbjct: 294 ----------------YNELTANPSQIEDILQAGAAKARKEARELL 323


>gi|327288144|ref|XP_003228788.1| PREDICTED: tyrosyl-tRNA synthetase, cytoplasmic-like [Anolis
           carolinensis]
          Length = 528

 Score = 50.6 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 42/230 (18%), Positives = 69/230 (30%), Gaps = 23/230 (10%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R    ++    +L  + ++  +  Y G   T    H  +   +  +    K G +  
Sbjct: 13  LITRNL-QEVLGEDKLKAILNERELKIYWGTATTGKP-HIAYFVPMSKIADFLKAGCEVT 70

Query: 72  SLMGGGTSII---GDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
            L     + +     P    E R       I+  +E I       + +  G         
Sbjct: 71  ILFADLHAYLDNMKAPWELLELRTQYYENVIKAMLESIGVPLEK-LTFIRGTDYQ----- 124

Query: 129 ETWLCSIKYIDLLREIGSFFSV-NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
              L     +D+ R          +    E V+   + E  L      Y  LQA D   L
Sbjct: 125 ---LSKEYTLDVYRLSSVVTQHDAKKAGAEVVK---QVEHPL-LSGLLYPGLQALDEEYL 177

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
                   Q GG DQ             L   K   L +P++   +G+KM
Sbjct: 178 K----VDAQFGGVDQRKIFTFAEKYLPSLGYAKRIHLMNPMVPGLTGSKM 223


>gi|307720277|ref|YP_003891417.1| tryptophanyl-tRNA synthetase [Sulfurimonas autotrophica DSM 16294]
 gi|306978370|gb|ADN08405.1| tryptophanyl-tRNA synthetase [Sulfurimonas autotrophica DSM 16294]
          Length = 321

 Score = 50.6 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 33/215 (15%), Positives = 62/215 (28%), Gaps = 32/215 (14%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   +   LH G+    +      +  +   + +    +       +  +   M+S    
Sbjct: 6   GIQPSGD-LHIGNYFGSIKQMVDAQNNNDTFAFIANYHAQTSVKDGKRLAELTMQSAT-D 63

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETW-LCSIKYIDLLREIGSFFSVNRMLSFESV 159
                I    S F      K    +     W L S   + LL    S+         +  
Sbjct: 64  FLALGIDAQKSIFWVQSDVKEVLELY----WVLSSFTPMGLLERAHSY--------KDKT 111

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
              +    SL    F+Y +L A D + L +     +   G DQ  ++    D+  +    
Sbjct: 112 AKGIAANHSL----FSYPVLMAADIL-LYQPDIVPV---GKDQIQHVEIARDIAIKFNNE 163

Query: 220 KLFALTSP---------LLTTASGTKMGKTLSGAI 245
                  P          +    G KM K+ +  +
Sbjct: 164 YGDIFKLPEYKIEANVATVPGTDGQKMSKSYNNTV 198


>gi|302038656|ref|YP_003798978.1| tryptophanyl-tRNA synthetase [Candidatus Nitrospira defluvii]
 gi|300606720|emb|CBK43053.1| Tryptophanyl-tRNA synthetase [Candidatus Nitrospira defluvii]
          Length = 329

 Score = 50.6 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 51/318 (16%), Positives = 94/318 (29%), Gaps = 56/318 (17%)

Query: 31  CSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDES 90
            + G      G   +   LH G+    +  +   +  ++    +    ++  + +     
Sbjct: 1   MTTGQKRVLSGMQPSGL-LHLGNWLGALENWNALQEQYECFFFVADWHALSSNYADTSRI 59

Query: 91  RRMMRSQEIQENIEKIKG------IFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREI 144
           R  +R   I      I        + S    +        M+   +WL            
Sbjct: 60  REYVRELLIDWLAAGIDPKRATVFVQSQVPDHAILHLLFSMIIPVSWLERNPT------- 112

Query: 145 GSFFSVNRMLSFESVRSRLKREQSLSFLEFN-YMILQAYDFVELAKNYDCRLQMGGSDQW 203
                       E ++ R      LS   F  Y +LQA D + L K     +   G DQ 
Sbjct: 113 -------YKEKQEEIKER-----DLSTYGFLGYPVLQAADIL-LYKPDFVPV---GKDQL 156

Query: 204 GNIICGIDLGERLK--------TPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPY 255
            ++    +L  R           P+        +    G KM K+   AI L+ +     
Sbjct: 157 PHLELTRELARRFNSLYRPVFPDPQEHLTKFAKVLGTDGRKMSKSYGNAINLSDQEPVVR 216

Query: 256 NFWQYWRNIDDAD--------------VVSFAKRLTTLP-MSEIDRMAKLQGKEINEAKK 300
              +    I D                V  F K  + LP + +I++  +       + KK
Sbjct: 217 QKIKTM--ITDPARVRRHDPGNPDVCPVYDFHKIFSPLPVIEQINQDCRKAAIGCIDCKK 274

Query: 301 IIATEITTMVHGREEAEK 318
           ++A  +   +    EA  
Sbjct: 275 LVADRVVERLAPMWEARA 292


>gi|84515287|ref|ZP_01002649.1| RNA pseudouridylate synthase family protein [Loktanella
           vestfoldensis SKA53]
 gi|84510570|gb|EAQ07025.1| RNA pseudouridylate synthase family protein [Loktanella
           vestfoldensis SKA53]
          Length = 272

 Score = 50.6 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 10/53 (18%), Positives = 24/53 (45%), Gaps = 1/53 (1%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
           +  +G  +  ++ +AG   S  +A R +    + +N  +I++  L +   D  
Sbjct: 4   DTPQGDRIAKVLSRAG-VASRRDAERMITEGRVSVNGKVITSPALNVTDADRI 55


>gi|154148301|ref|YP_001405671.1| tryptophanyl-tRNA synthetase [Campylobacter hominis ATCC BAA-381]
 gi|153804310|gb|ABS51317.1| tryptophanyl-tRNA synthetase [Campylobacter hominis ATCC BAA-381]
          Length = 325

 Score = 50.6 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 31/218 (14%), Positives = 67/218 (30%), Gaps = 34/218 (15%)

Query: 41  GYDLTASSLHAGHLT----QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRS 96
           G   +   LH G+      Q++ +    K   K    +    ++      +      +R 
Sbjct: 6   GLQPSGK-LHLGNYFASIKQMVNMQNGLKENDKIFMFIANYHALTSVNDGKK-----LRE 59

Query: 97  QEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSF 156
              +     +       +     KT   + ++E     + +I     +  +  +  +   
Sbjct: 60  STYEAAAAFLS------LGIDPKKTVFWVQSDEKLTLELYWI-----LSGYTPMGLLERA 108

Query: 157 ESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL 216
            + + +L +        F+Y +L A D +     Y   +   G DQ  ++    D+  + 
Sbjct: 109 HAYKDKLAKGFEAKHDLFSYPVLMAADILL----YGANIVPVGKDQTQHVEIARDIALKF 164

Query: 217 KTPKLFALTSP---------LLTTASGTKMGKTLSGAI 245
                  LT P          +    G KM K+    I
Sbjct: 165 NNAHGEILTLPEAKIDENVATVPGTDGAKMSKSYKNTI 202


>gi|149369391|ref|ZP_01889243.1| tryptophan--tRNA ligase [unidentified eubacterium SCB49]
 gi|149356818|gb|EDM45373.1| tryptophan--tRNA ligase [unidentified eubacterium SCB49]
          Length = 321

 Score = 50.6 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 33/163 (20%), Positives = 56/163 (34%), Gaps = 21/163 (12%)

Query: 144 IGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQW 203
           +  FF   R++   S + +  R   ++   F Y +L A D +     YD  +   G DQ 
Sbjct: 94  LSCFFPYKRLMLAHSFKDKADRLDDVNAGLFTYPMLMAADILL----YDAEVIPVGKDQM 149

Query: 204 GNIICGIDLGERLKTPKLFALTSP---------LLTTASGTKMGKTLSG--AIWLNKEMT 252
            +I    D+  R           P         L+    GTKM K+      I+L ++  
Sbjct: 150 QHIEMTRDVASRFHAQLGETFVIPEGKVKEETKLIPGTDGTKMSKSKGNFINIFLPEKKL 209

Query: 253 SPYNFWQYWRNID-----DADVVSFAKRLTTL-PMSEIDRMAK 289
                     +       D +  +  K  + L   +EI +M  
Sbjct: 210 RKQVMSIETDSTPLEEPKDWENCNCFKIYSLLASEAEIAQMKA 252


>gi|258515319|ref|YP_003191541.1| tryptophanyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771]
 gi|257779024|gb|ACV62918.1| tryptophanyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771]
          Length = 325

 Score = 50.6 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 32/215 (14%), Positives = 65/215 (30%), Gaps = 32/215 (14%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   +  SLH G+   +M      +  H+    +    ++            ++R Q  +
Sbjct: 6   GIQPSG-SLHLGNYFGMMKRMIDYQENHELFCFLVNYHALTTVF-----DSELLRRQTFE 59

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETW-LCSIKYIDLLREIGSFFSVNRMLSFESV 159
              + +             ++D   +   TW L ++  + LL                + 
Sbjct: 60  AVCDFLALGLDPEKSVFWVQSDVPEVTELTWILSNVTGMGLLERC------------HAF 107

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
           + +  +    +   F Y +L A D + L       +   G DQ  ++    D+  R    
Sbjct: 108 KDKTAKGIPANHGLFAYPVLMAADIL-LFGGEKVPV---GKDQKQHLEVAKDIALRFNNA 163

Query: 220 KLFALTSP---------LLTTASGTKMGKTLSGAI 245
                  P         ++    G KM K+    I
Sbjct: 164 YGETFVVPEPDIEEDFAVVPGTDGQKMSKSYGNNI 198


>gi|170735557|ref|YP_001774671.1| tryptophanyl-tRNA synthetase [Burkholderia cenocepacia MC0-3]
 gi|169821595|gb|ACA96176.1| tryptophanyl-tRNA synthetase [Burkholderia cenocepacia MC0-3]
          Length = 337

 Score = 50.6 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 51/341 (14%), Positives = 107/341 (31%), Gaps = 50/341 (14%)

Query: 45  TASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIE 104
           T   LH GH    +      +       L+    ++       +  RR   ++ + E   
Sbjct: 16  TGP-LHLGHYIGSLRARVQMQHEATQFLLLADTQALTD-----NMGRRQRVTENVIEVAL 69

Query: 105 KIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-L 163
               +           +  ++ +    L  +    LL  +            E +R R  
Sbjct: 70  DYLAVG-----IDPAISTIVVQSQVPELAELSQY-LLNLVTVARLERNPTIKEEIRLRGF 123

Query: 164 KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP---- 219
           +R+    FL   Y + QA D       +   + +G  DQ   I    +L  R        
Sbjct: 124 ERDIPAGFL--TYPVSQAADITAFKATH---VPVG-DDQLPMIEQTNELVRRFNATVEQP 177

Query: 220 -----KLFALTSPLLTTASGT-KMGKTLSGAIWL----NKEMTSPYNFWQ--YWRNIDDA 267
                +        L    G  KM K+L  AI L    ++   +  + +       + D 
Sbjct: 178 VLVECEAVLSAVTRLPGIDGKAKMSKSLGNAITLGSTPDEIAQAVKDMYTDPNHLRVSDP 237

Query: 268 DVVSFAKRLTTLP--------MSEIDRMAKLQGKEINEAKKIIATEITTMV------HGR 313
             V      T L         + E+    +  G   +  K+++   +  ++         
Sbjct: 238 GQVEGNVVFTFLDAFEPDVAKVDELKAHYRRGGLGDSVVKRVLNERLQALIEPIRARRRE 297

Query: 314 EEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLT 354
            EA+KA   A+     ++H++ +   ++++ + + G+    
Sbjct: 298 FEADKAEVMAI-LKRGTLHAREVAGATLAEVKGAMGLTYFD 337


>gi|27806349|ref|NP_776645.1| tyrosyl-tRNA synthetase, cytoplasmic [Bos taurus]
 gi|13638439|sp|Q29465|SYYC_BOVIN RecName: Full=Tyrosyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Tyrosyl--tRNA ligase; Short=TyrRS
 gi|3941720|gb|AAC82467.1| tyrosyl-tRNA synthetase [Bos taurus]
          Length = 528

 Score = 50.6 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 42/230 (18%), Positives = 69/230 (30%), Gaps = 23/230 (10%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R    ++    +L  +  +  +  Y G   T    H  +   +  +    K G +  
Sbjct: 13  LITRNL-QEVLGEEKLKEILKERELKVYWGTATTGKP-HVAYFVPMSKIADFLKAGCEVT 70

Query: 72  SLMGGGTSII---GDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
            L     + +     P    E R       I+  +E I       +++  G         
Sbjct: 71  ILFADLHAYLDNMKAPWDVLELRTSYYENVIKAMLESIGVPLEK-LRFIKGTDYQ----- 124

Query: 129 ETWLCSIKYIDLLREIGSFFSV-NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
              L     +D+ R          +    E V+   + E  L      Y  LQA D   L
Sbjct: 125 ---LSKEYTLDVYRLSSVVTQHDAKKAGAEVVK---QVEHPL-LSGLLYPGLQALDEEYL 177

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
                   Q GG DQ             L   K   L +P++   +G+KM
Sbjct: 178 K----VDAQFGGVDQRKIFTFAEKYLPALGYSKRIHLMNPMVPGLTGSKM 223


>gi|240278193|gb|EER41700.1| tyrosyl-tRNA synthetase [Ajellomyces capsulatus H143]
          Length = 437

 Score = 50.6 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 43/216 (19%), Positives = 64/216 (29%), Gaps = 22/216 (10%)

Query: 29  ILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSII---GDPS 85
           IL     +  Y G   T    H G+   ++ L    + G     L+      +     P 
Sbjct: 69  ILRQNRPLKVYFGTATTGRP-HCGYFCPMVKLAHFLRAGCHVKILLADIHGFLDNLKAPI 127

Query: 86  FRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIG 145
                R       I   +E I                         L S   +DL R   
Sbjct: 128 DLVNFRAKYYRYIITALLEAIHVPIDKLEFVLGSDYQ---------LSSRYTMDLFRLSS 178

Query: 146 SFFSV-NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWG 204
                  +    E V+        LS L   Y ++QA D   L    D   Q GG DQ  
Sbjct: 179 VVTEHDAKKAGAEVVKQ--VDNAPLSGL--IYPLMQALDEEHL----DVDAQFGGVDQRK 230

Query: 205 NIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
                ++   R+   +   L SP++   +G KM  +
Sbjct: 231 IFTLALETLPRVGYKERAHLMSPMVPGLAGGKMSAS 266


>gi|325096254|gb|EGC49564.1| tyrosyl-tRNA synthetase [Ajellomyces capsulatus H88]
          Length = 437

 Score = 50.6 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 43/216 (19%), Positives = 64/216 (29%), Gaps = 22/216 (10%)

Query: 29  ILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSII---GDPS 85
           IL     +  Y G   T    H G+   ++ L    + G     L+      +     P 
Sbjct: 69  ILRQNRPLKVYFGTATTGRP-HCGYFCPMVKLAHFLRAGCHVKILLADIHGFLDNLKAPI 127

Query: 86  FRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIG 145
                R       I   +E I                         L S   +DL R   
Sbjct: 128 DLVNFRAKYYRYIITALLEAIHVPIDKLEFVLGSDYQ---------LSSRYTMDLFRLSS 178

Query: 146 SFFSV-NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWG 204
                  +    E V+        LS L   Y ++QA D   L    D   Q GG DQ  
Sbjct: 179 VVTEHDAKKAGAEVVKQ--VDNAPLSGL--IYPLMQALDEEHL----DVDAQFGGVDQRK 230

Query: 205 NIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
                ++   R+   +   L SP++   +G KM  +
Sbjct: 231 IFTLALETLPRVGYKERAHLMSPMVPGLAGGKMSAS 266


>gi|255323410|ref|ZP_05364541.1| tryptophanyl-tRNA synthetase [Campylobacter showae RM3277]
 gi|255299447|gb|EET78733.1| tryptophanyl-tRNA synthetase [Campylobacter showae RM3277]
          Length = 321

 Score = 50.6 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 37/219 (16%), Positives = 61/219 (27%), Gaps = 40/219 (18%)

Query: 41  GYDLTASSLHAGHL---TQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQ 97
           G   +   LH G+     + M+    Q      I+     TS+      +         +
Sbjct: 6   GLQPSGK-LHLGNYFASIKQMVEAQGQSEMFMFIANYHAMTSVADAGKLKQN-----TYE 59

Query: 98  EIQENIE-KIKGIFSSFIKYGTGKTDALMLNNETW-LCSIKYIDLLREIGSFFSVNRMLS 155
                +   I    S F      K    +     W L     + LL    S+        
Sbjct: 60  AASAFLSLGIDPQKSVFWVQSDVKEVLELY----WILSQYTPMGLLERAHSY-------- 107

Query: 156 FESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER 215
            + V   L     L    F+Y +L A D +     Y  ++   G DQ  ++    D+  +
Sbjct: 108 KDKVAKGLTSHHGL----FSYPVLMAADILL----YGAQVVPVGKDQIQHVEIARDIAIK 159

Query: 216 LKTPKLFALTSP---------LLTTASGTKMGKTLSGAI 245
                      P          +    G KM K+    I
Sbjct: 160 FNNEHGDIFVLPEYKVDENVATVPGTDGAKMSKSYGNTI 198


>gi|294790260|ref|ZP_06755418.1| tryptophan--tRNA ligase [Scardovia inopinata F0304]
 gi|294458157|gb|EFG26510.1| tryptophan--tRNA ligase [Scardovia inopinata F0304]
          Length = 364

 Score = 50.6 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 38/236 (16%), Positives = 71/236 (30%), Gaps = 46/236 (19%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN 102
            T   LH GH    +     +Q  G     L+                 +++  ++  E+
Sbjct: 48  PTGR-LHLGHYFGTLTERVRMQNLGVHTNILVADY--------------QVITDRDTTEH 92

Query: 103 IEKIKGIFSSFIKYG----TGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
           IE    + +  + Y           +  ++     +   +  L  +             +
Sbjct: 93  IE--DNVLNLVVDYLAAGIDPTKTMIFAHSAVPAENQLMLPFLSLVTEAELHRNP----T 146

Query: 159 VRSRLK-REQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK 217
           V+S ++    +L+ L   Y + QA D   L    +      G DQ  +I     +  R  
Sbjct: 147 VKSEMEASGHALTGLLLTYPVHQACD--ILFCKGNVV--PVGKDQLPHIEITRTIARRFN 202

Query: 218 -----TPKLFALTSPL--------LTTASGTKMGKTLSGAIWLNKEMTSPYNFWQY 260
                T  +F  T P         +    G KM K+   AI+L           + 
Sbjct: 203 ERYSPTKPVF--TEPTAILSDASEIPGLDGRKMSKSYGNAIFLGATAEETAKLIKK 256


>gi|225850029|ref|YP_002730263.1| tryptophanyl-tRNA synthetase [Persephonella marina EX-H1]
 gi|225645914|gb|ACO04100.1| tryptophan tRNA ligase [Persephonella marina EX-H1]
          Length = 417

 Score = 50.6 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 52/253 (20%), Positives = 93/253 (36%), Gaps = 38/253 (15%)

Query: 91  RRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW------LCSIKYIDL--LR 142
           R  +  ++I+  +      F   ++  TGK    +              + K ID   L+
Sbjct: 122 RDFLAGKQIKIILTPPPESFDQALEKATGKQKNKIFEEYLREAFHRAFYNQKGIDFKWLK 181

Query: 143 EIGSFFSVNRMLSFESVRSRLKRE---QSLSFLEFN-YMILQAYDFVELAKNYDCRLQMG 198
           E    F + + +  E VR+ L+     + +  L F  Y +LQA D + + K     +   
Sbjct: 182 ETLMRFGIQKKIVEEVVRN-LEEGDVGKDIDTLGFLAYPVLQAADIL-IYKADAVPV--- 236

Query: 199 GSDQWGNIICGIDLGERLKT--PKLFALTSPLLT------TASGTKMGKTLSGAIWLNKE 250
           G DQ  +I    ++  R      ++F     LLT         G KM K+ + AI+L+ +
Sbjct: 237 GEDQLPHIELTREIARRFNNLYDQIFPEPEALLTEESKLPGIDGRKMSKSYNNAIYLSDD 296

Query: 251 M-------TSPYNFWQYWRNI----DDA-DVVSFAKRLTT-LPMSEIDRMAKLQGKEINE 297
                          Q  R       D   V  +    T    +S+ID+  +       +
Sbjct: 297 RETVNRKVLEMKTDPQRVRRTDPGNPDVCIVFEYHNIFTDSETVSDIDKKCRKAEIGCVD 356

Query: 298 AKKIIATEITTMV 310
            KKI+A  + + +
Sbjct: 357 CKKILAENLNSFL 369


>gi|50311493|ref|XP_455771.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49644907|emb|CAG98479.1| KLLA0F15389p [Kluyveromyces lactis]
          Length = 397

 Score = 50.6 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 33/224 (14%), Positives = 73/224 (32%), Gaps = 33/224 (14%)

Query: 31  CSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDES 90
             +  +  Y G   T    H G+   +  L    K G +   L+    + + +       
Sbjct: 33  VEKRPLKLYWGTAPTGRP-HCGYFVPMTKLADFLKAGCEVTVLLADLHAFLDNMKA---- 87

Query: 91  RRMMRSQEIQENIEKIKGIFSSFIKYGT---GKTDALMLNNETWLCSIKYIDLLREIGSF 147
                 + +    +  + +  + ++       K   ++ ++          + + +I   
Sbjct: 88  ----SLEVVAYRAKYYELVIKAILRSINVPIEKLKFVIGSSYQ-----TSNEYIMDI--- 135

Query: 148 FSVNRMLSFESVRSRLKRE------QSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSD 201
           F ++ ++S      R   +        L      Y ++QA D   L       +Q GG D
Sbjct: 136 FKLSNIVSQND-AKRAGADVVKQVANPL-LSGLIYPLMQALDEEHL----GVDVQFGGVD 189

Query: 202 QWGNIICGIDLGERLKTPKLFALTSPLLTTAS-GTKMGKTLSGA 244
           Q    +   +  E+L   K   L +P++     G KM  +   +
Sbjct: 190 QRKIFVLAEENLEKLGYKKRAHLMNPMVPGLGQGGKMSASDPNS 233


>gi|161870339|ref|YP_001599509.1| tryptophanyl-tRNA synthetase [Neisseria meningitidis 053442]
 gi|161595892|gb|ABX73552.1| tryptophanyl-tRNA synthetase [Neisseria meningitidis 053442]
 gi|325144760|gb|EGC67053.1| tryptophanyl-tRNA synthetase [Neisseria meningitidis M01-240013]
          Length = 336

 Score = 50.6 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 40/218 (18%), Positives = 62/218 (28%), Gaps = 49/218 (22%)

Query: 174 FNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSP------ 227
           F+Y IL   D +    N +  +   G DQ  ++    D+  R         T P      
Sbjct: 136 FSYPILMTADILMFNAN-EVPV---GRDQIQHVEMARDIAGRFNHRFKEIFTLPEVKIDE 191

Query: 228 ---LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWR---------NIDDAD-VVSFAK 274
              LL    G KM K+    I L +                         D   +    K
Sbjct: 192 NVELLVGLDGRKMSKSYGNTIPLWENDKKTQKSVNKIITNMKEPGEPKQPDESPLFEIYK 251

Query: 275 RLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQ 334
             +T   +        +G    EAKK++A +I        E  +      E    +    
Sbjct: 252 AFSTPSETAAFTQMLAEGLAWGEAKKLLAAKINA------ELAEPRERYNEL---TADPS 302

Query: 335 HMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHL 372
            +  I                 ++AG   +  EAR  L
Sbjct: 303 QIEEI-----------------LQAGAQKARKEARELL 323


>gi|309790498|ref|ZP_07685058.1| hypothetical protein OSCT_1009 [Oscillochloris trichoides DG6]
 gi|308227485|gb|EFO81153.1| hypothetical protein OSCT_1009 [Oscillochloris trichoides DG6]
          Length = 337

 Score = 50.6 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 36/221 (16%), Positives = 71/221 (32%), Gaps = 31/221 (14%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
            T   LH GH    +      +  ++   ++     +   P            ++I    
Sbjct: 13  PTGK-LHLGHYVGSLANRVALQETYECFFIIADLHVLTTKP----------SHEDIAAIP 61

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFS--VNRMLSFESVRS 161
           + I+ +    +  G              +  I  I+L+ E+              E  R+
Sbjct: 62  QNIRDLVLDHLAVGIDPNKVTFYVQSA-VKEIYQINLIFEMMVSVPRLSRLPSIKEMARN 120

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKL 221
               E+ L F    Y +LQA D + + + +   +   G D   ++    ++  R     L
Sbjct: 121 AHIDEEQLPFGLLGYPVLQAGDIL-MPRAHLVPV---GKDNEAHVEITREIARRFNG--L 174

Query: 222 FALTSP----------LLTTASGT-KMGKTLSGAIWLNKEM 251
           +    P           L    G  KM K+ + AI+L+ + 
Sbjct: 175 YGEVFPEPDVLVPDVGTLPGTDGQGKMSKSANNAIFLSDDA 215


>gi|254820254|ref|ZP_05225255.1| tryptophanyl-tRNA synthetase [Mycobacterium intracellulare ATCC
           13950]
          Length = 339

 Score = 50.6 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 45/253 (17%), Positives = 83/253 (32%), Gaps = 38/253 (15%)

Query: 32  SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT--GHKPISLMGGGTSI--IGDPSFR 87
           + G    + G   T+ SLH G+    +      +    H     +    +I    DP   
Sbjct: 4   ATGSSRIFSGVQPTSDSLHLGNALGAVT--HWVELQDDHDAFFCVVDLHAITVAQDPEA- 60

Query: 88  DESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSF 147
                 +R + +    + +             ++     +   W        +L     F
Sbjct: 61  ------LRRRTLVTAAQYLALGIDPARSTVFVQSHVPAHSQLAW--------VLGCFTGF 106

Query: 148 FSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNII 207
              +RM  F+    R +   S +   F Y +LQA D +     YD  L   G DQ  ++ 
Sbjct: 107 GQASRMTQFKDKSLR-QGADSTTVGLFTYPVLQAADVLA----YDTDLVPVGEDQRQHLE 161

Query: 208 CGIDLGERLKT--PKLFALTSPLLTTASGT---------KMGKTLSGAIWLNKEMTSPYN 256
              D+ +R     P  F +   L+  A+           KM K+ +    L   +  P  
Sbjct: 162 LARDVAQRFNARFPDTFVVPDVLIPKATAKIYDLQDPTSKMSKSAATDAGLINLLDDPAL 221

Query: 257 FWQYWRN-IDDAD 268
             +  R+ + D++
Sbjct: 222 SAKKIRSAVTDSE 234


>gi|73949939|ref|XP_535324.2| PREDICTED: similar to Tyrosyl-tRNA synthetase, cytoplasmic
           (Tyrosyl--tRNA ligase) (TyrRS) isoform 1 [Canis
           familiaris]
          Length = 511

 Score = 50.6 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 41/223 (18%), Positives = 67/223 (30%), Gaps = 22/223 (9%)

Query: 19  HQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGT 78
            ++    +L  +  +  +  Y G   T    H  +   +  +    K G +   L     
Sbjct: 2   QEVLGEEKLKEILKERELKVYWGTATTGKP-HVAYFVPMSKIADFLKAGCEVTILFADLH 60

Query: 79  SII---GDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSI 135
           + +     P    E R       I+  +E I       +K+  G            L   
Sbjct: 61  AYLDNMKAPWELLELRTSYYENVIKAMLESIGVPLEK-LKFIKGTDYQ--------LSKE 111

Query: 136 KYIDLLREIGSFFSV-NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCR 194
             +D+ R          +    E V+   + E  L      Y  LQA D   L       
Sbjct: 112 YTLDVYRLSSVVTQHDAKKAGAEVVK---QVEHPL-LSGLLYPGLQALDEEYLK----VD 163

Query: 195 LQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
            Q GG DQ             L   K   L +P++   +G+KM
Sbjct: 164 AQFGGVDQRKIFTFAEKYLPALGYSKRVHLMNPMVPGLTGSKM 206


>gi|325204457|gb|ADY99910.1| tryptophanyl-tRNA synthetase [Neisseria meningitidis M01-240355]
          Length = 336

 Score = 50.6 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 40/218 (18%), Positives = 62/218 (28%), Gaps = 49/218 (22%)

Query: 174 FNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSP------ 227
           F+Y IL   D +    N +  +   G DQ  ++    D+  R         T P      
Sbjct: 136 FSYPILMTADILMFNAN-EVPV---GRDQIQHVEMARDIAGRFNHRFKEIFTLPEVKIDE 191

Query: 228 ---LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWR---------NIDDAD-VVSFAK 274
              LL    G KM K+    I L +                         D   +    K
Sbjct: 192 NVELLVGLDGRKMSKSYGNTIPLWENDKKTQKSVNKIITNMKEPGEPKQPDESPLFEIYK 251

Query: 275 RLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQ 334
             +T   +        +G    EAKK++A +I        E  +      E    +    
Sbjct: 252 AFSTPSETAAFTQMLAEGLAWGEAKKLLAAKINA------ELAEPRERYNEL---TADPS 302

Query: 335 HMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHL 372
            +  I                 ++AG   +  EAR  L
Sbjct: 303 QIEEI-----------------LQAGAQKARKEARELL 323


>gi|302816915|ref|XP_002990135.1| hypothetical protein SELMODRAFT_185043 [Selaginella moellendorffii]
 gi|300142148|gb|EFJ08852.1| hypothetical protein SELMODRAFT_185043 [Selaginella moellendorffii]
          Length = 369

 Score = 50.6 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 53/304 (17%), Positives = 95/304 (31%), Gaps = 37/304 (12%)

Query: 15  RGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +   +     QG     Y G   ++ SLH GHL Q M   +LQ     P+ +
Sbjct: 54  RGIFFAHRDLESILDAYEQGHKFFLYTGRGPSSESLHLGHLVQFMFTKYLQDAFDVPLVI 113

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                          E  + +     ++ I     +  +F           + +N  ++ 
Sbjct: 114 QLSDDEKFIWKDISQEECQRLGRNNAKDIISCGFRLERTF-----------IFSNLDYVS 162

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ-AYDFVELAKN-- 190
              + ++L  I SF S N M +       L  E  +   +  Y  +Q A  F     +  
Sbjct: 163 GALFDNVL-TISSFLSSNAMSA--VFG--LNAETDV-LGKLLYPAVQIAPAFSTSFDDVF 216

Query: 191 -----YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFAL---TSPLLTTASGT-KMGKTL 241
                  C +     DQ        DL  RLK  K   +     P +    G+ KM  + 
Sbjct: 217 GEGIKMRCLIPC-AIDQDPYFRLSRDLAPRLKLYKPALIESRFLPSIEAGDGSGKMSASS 275

Query: 242 SG-AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT--TLPMSEIDRMAKLQGKEINEA 298
              AI++   +       Q         V+++          + E+        + + + 
Sbjct: 276 PNSAIFVTDTL---EEIKQKLAGAAVESVLAYLTFFEENDAVLEEMKADFSSGKRSLEDL 332

Query: 299 KKII 302
           K  +
Sbjct: 333 KNDL 336


>gi|254669878|emb|CBA04354.1| Tryptophanyl-tRNA synthetase [Neisseria meningitidis alpha153]
          Length = 280

 Score = 50.6 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 40/218 (18%), Positives = 62/218 (28%), Gaps = 49/218 (22%)

Query: 174 FNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSP------ 227
           F+Y IL   D +    N +  +   G DQ  ++    D+  R         T P      
Sbjct: 80  FSYPILMTADILMFNAN-EVPV---GRDQIQHVEMARDIAGRFNYRFQELFTLPEVKIDE 135

Query: 228 ---LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWR---------NIDDAD-VVSFAK 274
              LL    G KM K+    I L +                         D   +    K
Sbjct: 136 NVELLVGLDGRKMSKSYGNTIPLWENDKKTQKSVNKIITNMKEPGEPKQPDESPLFEIYK 195

Query: 275 RLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQ 334
             +T   +        +G    EAKK++A +I        E  +      E    +    
Sbjct: 196 AFSTPSETVEFTKMLAEGLAWGEAKKLLAAKINA------ELAEPRERYNEL---TADPS 246

Query: 335 HMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHL 372
            +  I                 ++AG   +  EAR  L
Sbjct: 247 QIEEI-----------------LQAGAQKARKEARELL 267


>gi|114798538|ref|YP_759667.1| pseudouridine synthase rsuA family protein [Hyphomonas neptunium
           ATCC 15444]
 gi|114738712|gb|ABI76837.1| pseudouridine synthase rsuA family protein [Hyphomonas neptunium
           ATCC 15444]
          Length = 305

 Score = 50.2 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 9/65 (13%), Positives = 27/65 (41%), Gaps = 1/65 (1%)

Query: 342 SKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
           +  + S G  +   + +AG   S  E  R +++  + +N   +++   ++  ++    G 
Sbjct: 30  TPADWSEGERIAKYLARAG-VASRREVERLIEAGEVTVNGQKLTSPAFKVTGREAIKVGR 88

Query: 402 IKLSF 406
             +  
Sbjct: 89  KVIQA 93


>gi|326933129|ref|XP_003212661.1| PREDICTED: tyrosyl-tRNA synthetase, cytoplasmic-like, partial
           [Meleagris gallopavo]
          Length = 507

 Score = 50.2 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 42/222 (18%), Positives = 66/222 (29%), Gaps = 22/222 (9%)

Query: 24  PRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSII-- 81
             +L  +  +  V  Y G   T    H  +   +  +    K G +   L     + +  
Sbjct: 4   EDKLMGILKEREVKIYWGTATTGKP-HVAYFVPMSKIADFLKAGCEVTILFADLHAYLDN 62

Query: 82  -GDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDL 140
              P    E R       I+  +E I       +K+  G            L     +D+
Sbjct: 63  MKAPWELLELRTRYYENVIKAMLESIGVPLEK-LKFVRGTDYQ--------LSKEYTLDV 113

Query: 141 LREIGSFFSV-NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGG 199
            R          +    E V+   + E  L      Y  LQA D   L        Q GG
Sbjct: 114 YRLSSVVTQHDAKKAGAEVVK---QVEHPL-LSGLLYPGLQALDEEYLK----VDAQFGG 165

Query: 200 SDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            DQ             L   K   L +P++   +G+KM  + 
Sbjct: 166 VDQRKIFTFAEKYLPSLGYAKRIHLMNPMVPGLTGSKMSSSE 207


>gi|289740311|gb|ADD18903.1| tyrosyl-tRNA synthetase [Glossina morsitans morsitans]
          Length = 514

 Score = 50.2 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 44/236 (18%), Positives = 71/236 (30%), Gaps = 23/236 (9%)

Query: 10  SILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
             L  R    ++    +LD +  +  +  Y G   T    H  +   +  +    K G +
Sbjct: 10  KELITRNL-QEVLGEDKLDAILKERDLKIYWGTATTGRP-HVAYFVPMSKIADFLKAGCE 67

Query: 70  PISLMGGGTSII---GDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
              L     + +     P    E R       I+E +  I       +K+  G       
Sbjct: 68  VTILFADLHAYLDNMKAPWSLLELRAQYYEAVIKEMLSSIGVPLDR-LKFVKGTDYQ--- 123

Query: 127 NNETWLCSIKYIDLLREIGSFFSV-NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
                L     +D+ +          R    E V+   + E  L      Y  LQA D  
Sbjct: 124 -----LSREYSLDVYKLSSVVTQHDARKAGAEVVK---QVEYPL-LSGLLYPGLQALDEE 174

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            L        Q GG DQ            +L   K   L +P++   +G KM  + 
Sbjct: 175 YLK----VDAQFGGVDQRKIFTFAEKSLPQLGYEKRIHLMNPMVPGLAGGKMSSSE 226


>gi|302340682|ref|YP_003805888.1| tryptophanyl-tRNA synthetase [Spirochaeta smaragdinae DSM 11293]
 gi|301637867|gb|ADK83294.1| tryptophanyl-tRNA synthetase [Spirochaeta smaragdinae DSM 11293]
          Length = 360

 Score = 50.2 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 36/227 (15%), Positives = 66/227 (29%), Gaps = 44/227 (19%)

Query: 44  LTASSLHAGHLTQ-LMLLFWLQKTGHKPISLMGGG---TSIIGDPSFRDESRRMMRSQEI 99
            T   LH GHL   L     L K G     ++      T      +  +  R++     I
Sbjct: 40  PTGR-LHIGHLFGSLQNRVRLHKLGVPTFIVIADYQVLTDRDTFDNISENIRQL----TI 94

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
                 I         +    +    LN          +  L  + +          E +
Sbjct: 95  DYIAAGIDVTDGK--TFIFPHSHVPELN-------QLLLPFLTLVTNAELDRNPTVKEEI 145

Query: 160 ----RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER 215
               + R+          + Y + QA D +         + +G  DQ  ++     +  R
Sbjct: 146 AASGQKRINAGM------YTYPVHQAADILFCK---GSVVPVG-KDQLPHLELTRTIARR 195

Query: 216 LKT----------PKLFALT-SPLLTTASG-TKMGKTLSGAIWLNKE 250
                             L+ +P++    G  KM K+ + AI L+ +
Sbjct: 196 FNDRFAGKRPVFPEPQPLLSEAPIILGLDGSQKMSKSRNNAIMLSAD 242


>gi|330819662|ref|YP_004348524.1| tryptophanyl-tRNA synthetase II [Burkholderia gladioli BSR3]
 gi|327371657|gb|AEA63012.1| tryptophanyl-tRNA synthetase II [Burkholderia gladioli BSR3]
          Length = 358

 Score = 50.2 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 42/217 (19%), Positives = 71/217 (32%), Gaps = 29/217 (13%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
            T   LH GH    +    L +  H+   L+    ++  +    D+ RR      + E  
Sbjct: 19  PTGP-LHLGHYVGSLRTRLLLQDTHQQNILVADTQAMTDNAHDPDKVRR-----NVLEVA 72

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR- 162
                +          +T   + +    L  +  +  L  +            + +++R 
Sbjct: 73  LDYLAVG-----IDPARTTICLQSALPALAELTLL-YLNFVTVSRLERNPTIKDEIQARG 126

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT---- 218
             R+    FL   Y + QA D       +   +   G DQ   I    ++  RL      
Sbjct: 127 FGRDIPAGFL--CYPVAQAADI----TGFRATVVPVGEDQAPLIEQTNEIVRRLNRQTGI 180

Query: 219 ---PKLFALTSPL--LTTASGT-KMGKTLSGAIWLNK 249
              P++ AL   L  L    G  KM K+L  AI L  
Sbjct: 181 ELLPEVEALIPTLGRLPGIDGKAKMSKSLGNAISLAA 217


>gi|325130544|gb|EGC53297.1| tryptophanyl-tRNA synthetase [Neisseria meningitidis OX99.30304]
          Length = 336

 Score = 50.2 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 40/218 (18%), Positives = 62/218 (28%), Gaps = 49/218 (22%)

Query: 174 FNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSP------ 227
           F+Y IL   D +    N +  +   G DQ  ++    D+  R         T P      
Sbjct: 136 FSYPILMTADILMFNAN-EVPV---GRDQIQHVEMARDIAGRFNHRFREIFTLPEVKIDE 191

Query: 228 ---LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWR---------NIDDAD-VVSFAK 274
              LL    G KM K+    I L +                         D   +    K
Sbjct: 192 NVELLVGLDGRKMSKSYGNTIPLWENDKKTQKSVNKIITNMKEPGEPKQPDESPLFEIYK 251

Query: 275 RLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQ 334
             +T   +        +G    EAKK++A +I        E  +      E    +    
Sbjct: 252 AFSTPSETAAFTQMLAEGLAWGEAKKLLAAKINA------ELAEPRERYNEL---TADPS 302

Query: 335 HMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHL 372
            +  I                 ++AG   +  EAR  L
Sbjct: 303 QIEEI-----------------LQAGAQKARKEARELL 323


>gi|114555410|ref|XP_001164315.1| PREDICTED: tyrosyl-tRNA synthetase isoform 5 [Pan troglodytes]
          Length = 374

 Score = 50.2 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 43/230 (18%), Positives = 70/230 (30%), Gaps = 23/230 (10%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R    ++    +L  +  +  +  Y G   T    H  +   +  +    K G +  
Sbjct: 13  LITRNL-QEVLGEEKLKEILKERELKIYWGTATTGKP-HVAYFVPMSKIADFLKAGCEVT 70

Query: 72  SLMGGGTSII---GDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
            L     + +     P    E R       I+  +E I       +K+  G         
Sbjct: 71  ILFADLHAYLDNMKAPWELLELRVSYYENVIKAMLESIGVPLEK-LKFIKGTDYQ----- 124

Query: 129 ETWLCSIKYIDLLREIGSFFSV-NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
              L     +D+ R         ++    E V+   + E  L      Y  LQA D   L
Sbjct: 125 ---LSKEYTLDVYRLSSVVTQHDSKKAGAEVVK---QVEHPL-LSGLLYPGLQALDEEYL 177

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
                   Q GG DQ             L   K   L +P++   +G+KM
Sbjct: 178 K----VDAQFGGVDQRKIFTFAEKYLPALGYSKRVHLMNPMVPGLTGSKM 223


>gi|225681113|gb|EEH19397.1| tyrosyl-tRNA synthetase [Paracoccidioides brasiliensis Pb03]
          Length = 411

 Score = 50.2 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 40/213 (18%), Positives = 62/213 (29%), Gaps = 22/213 (10%)

Query: 32  SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSII---GDPSFRD 88
               +  Y G   T    H G+   ++ L    + G     L+      +     P    
Sbjct: 34  QNRPLKVYFGTATTGRP-HCGYFCPIVKLAHFLQAGCHVKILLADIHGFLDNLKAPIDLV 92

Query: 89  ESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFF 148
             R       I   +E I                         L +   +DL R      
Sbjct: 93  NYRAEYYRYVITALLEAIHVPIEKLEFVLGSDYQ---------LSARYTMDLFRLSSVVT 143

Query: 149 SV-NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNII 207
               +    E V+        LS L   Y ++QA D   L    D   Q GG DQ     
Sbjct: 144 EHDAKKAGAEVVKQ--VDNAPLSGL--IYPLMQALDEEHL----DVDAQFGGVDQRKIFA 195

Query: 208 CGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
             +D   R+   +   L +P++   +G KM  +
Sbjct: 196 LALDTLPRIGYKERAHLMNPMVPGLAGGKMSAS 228


>gi|237743977|ref|ZP_04574458.1| tryptophanyl-tRNA synthetase [Fusobacterium sp. 7_1]
 gi|256027410|ref|ZP_05441244.1| tryptophanyl-tRNA synthetase [Fusobacterium sp. D11]
 gi|260497956|ref|ZP_05816073.1| tryptophanyl-tRNA synthetase [Fusobacterium sp. 3_1_33]
 gi|289765373|ref|ZP_06524751.1| tryptophanyl-tRNA synthetase [Fusobacterium sp. D11]
 gi|229433008|gb|EEO43220.1| tryptophanyl-tRNA synthetase [Fusobacterium sp. 7_1]
 gi|260196517|gb|EEW94047.1| tryptophanyl-tRNA synthetase [Fusobacterium sp. 3_1_33]
 gi|289716928|gb|EFD80940.1| tryptophanyl-tRNA synthetase [Fusobacterium sp. D11]
          Length = 325

 Score = 50.2 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 37/286 (12%), Positives = 81/286 (28%), Gaps = 49/286 (17%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   +   LH G+    M  F   +  +     +    S+      + E+ +      + 
Sbjct: 7   GIQPSGI-LHIGNYFGAMKQFIDLQDDYDGFYFIADYHSLTSLT--KAETLKENTYNIVL 63

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           + +          I     K+   + +N      + ++     + +   V  +    S +
Sbjct: 64  DYLA---------IGLDPNKSTIFLQSNVPEHTELTWL-----LSNITPVGLLERGHSYK 109

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP- 219
            ++ +    +     Y +L A D +     YD  +   G DQ  ++    D+  +     
Sbjct: 110 DKIAKGIPSNTGLLTYPVLMAADILI----YDSDIVPVGKDQKQHLEMTRDIAMKFNQQY 165

Query: 220 --KLFALTSPLLT-------TASGTKMGKTLSGAI-WLNKEMTSPYNFWQYWRNI----- 264
             + F L  PL+           G KM K+ +  I     +            +I     
Sbjct: 166 EVEFFKLPEPLILDDSAIVPGTDGQKMSKSYNNTINMFATKKKLKEQ----VMSIVTDST 221

Query: 265 -------DDADVVSFAKRLTTLPMS-EIDRMAKLQGKEINEAKKII 302
                   D ++         +    E+             AK  +
Sbjct: 222 PLEEPKNPDNNIAKIYALFNNIDKQNELKEKFLAGNFGYGHAKTEL 267


>gi|203287478|ref|YP_002222493.1| tryptophanyl-tRNA synthetase [Borrelia recurrentis A1]
 gi|201084698|gb|ACH94272.1| tryptophanyl-tRNA synthetase [Borrelia recurrentis A1]
          Length = 350

 Score = 50.2 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 37/226 (16%), Positives = 75/226 (33%), Gaps = 44/226 (19%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
            T  SLH GH    ++     +  ++   ++    +             +    +++   
Sbjct: 13  PTG-SLHLGHYVGSIVNRLKYQEEYETYIIIADLHT-------------LTTQSDLKSIS 58

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL 163
           E    +    + Y +   D   +N           +LL E+    S+  M++      R+
Sbjct: 59  EISINVREIVLDYLSCGIDPERVN---IYLQSAIPELL-ELNLILSMIVMVNR---LQRI 111

Query: 164 KREQSLS----FLE-----FNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
              + +S      E       Y +L + D +    ++   + +G  D   +I    +L  
Sbjct: 112 PSIKDMSINAGLSEIPYGLLGYPVLMSADILMAKADF---VPVG-RDNESHIELTRELAR 167

Query: 215 RLK---------TPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKE 250
           +            P+        L    G TKM K+L  AI+LN +
Sbjct: 168 KFNFLYGENFFPIPEAIFTDFHTLVGIDGKTKMSKSLGNAIFLNDD 213


>gi|88859200|ref|ZP_01133840.1| tryptophanyl-tRNA synthetase [Pseudoalteromonas tunicata D2]
 gi|88818217|gb|EAR28032.1| tryptophanyl-tRNA synthetase [Pseudoalteromonas tunicata D2]
          Length = 332

 Score = 50.2 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 42/216 (19%), Positives = 67/216 (31%), Gaps = 35/216 (16%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
            T   LH GH    +    ++   H         T +I D     +      S   ++  
Sbjct: 11  PTGP-LHLGHYVGSLK-NRIELQNHY------SQTILIADLQGLTD-----NSHNPEKVS 57

Query: 104 EKIKGIFSSFIKYG--TGKTDALMLNNETWLCSIKYIDLLREIGSFFSV--NRMLSFESV 159
             I  + + ++  G    KT   + +    L  +        + S   +  N  +  E  
Sbjct: 58  SNILNVLADYLAVGICPTKTTICLQSALPALSELTM--FYANLVSVSRLERNPTVKAEIA 115

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
                    + F  F+Y I QA D       +D  L   G DQ   I    ++  +L   
Sbjct: 116 SKEFGSSIPVGF--FSYPISQAADITA----FDATLVPVGDDQLPMIEITNEIVRKLNNI 169

Query: 220 KL-FALT--------SPLLTTASGT-KMGKTLSGAI 245
                LT        +P L    G  KM K+L   I
Sbjct: 170 AQKTILTQAKPLLSDTPRLPGVDGKAKMSKSLGNVI 205


>gi|27065983|pdb|1N3L|A Chain A, Crystal Structure Of A Human Aminoacyl-Trna Synthetase
           Cytokine
 gi|40889349|pdb|1Q11|A Chain A, Crystal Structure Of An Active Fragment Of Human
           Tyrosyl-Trna Synthetase With Tyrosinol
          Length = 372

 Score = 50.2 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 43/230 (18%), Positives = 70/230 (30%), Gaps = 23/230 (10%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R    ++    +L  +  +  +  Y G   T    H  +   +  +    K G +  
Sbjct: 13  LITRNL-QEVLGEEKLKEILKERELKIYWGTATTGKP-HVAYFVPMSKIADFLKAGCEVT 70

Query: 72  SLMGGGTSII---GDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
            L     + +     P    E R       I+  +E I       +K+  G         
Sbjct: 71  ILFADLHAYLDNMKAPWELLELRVSYYENVIKAMLESIGVPLEK-LKFIKGTDYQ----- 124

Query: 129 ETWLCSIKYIDLLREIGSFFSV-NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
              L     +D+ R         ++    E V+   + E  L      Y  LQA D   L
Sbjct: 125 ---LSKEYTLDVYRLSSVVTQHDSKKAGAEVVK---QVEHPL-LSGLLYPGLQALDEEYL 177

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
                   Q GG DQ             L   K   L +P++   +G+KM
Sbjct: 178 K----VDAQFGGIDQRKIFTFAEKYLPALGYSKRVHLMNPMVPGLTGSKM 223


>gi|315185732|gb|EFU19499.1| tryptophanyl-tRNA synthetase [Spirochaeta thermophila DSM 6578]
          Length = 358

 Score = 50.2 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 38/218 (17%), Positives = 76/218 (34%), Gaps = 27/218 (12%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRD-ESRRMMRSQEIQEN 102
            T   LH GH    +      +  ++   ++     +   P  +D E+      + + + 
Sbjct: 12  PTGK-LHLGHYVGSLANRVKLQDDYECFFIIADLHMLTTKPEKKDVEAIAENAREMVLDY 70

Query: 103 IEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR 162
           +        S I   +   +   LN         + ++L  +     +  +   E  ++ 
Sbjct: 71  LACGIDPEKSVIYLQSAVPEVYELN--------LFFEMLVTVPRLQRIPTL--KEMAQAA 120

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PK 220
              E  L  L   Y +LQA D + L + +   +   G D   ++    ++  R      +
Sbjct: 121 HLEEMPLGLL--GYPVLQAADIL-LPRAHVVPV---GKDNVPHVELTREIARRFNFLYGE 174

Query: 221 LFALTSPL------LTTASGT-KMGKTLSGAIWLNKEM 251
           +F +  PL      L    G  KM K+L  AI L+ + 
Sbjct: 175 VFPVPDPLVGEVPTLVGIDGAAKMSKSLGNAILLSDDP 212


>gi|319410713|emb|CBY91095.1| tryptophanyl-tRNA synthetase (tryptophan-tRNA ligase; TrpRS)
           [Neisseria meningitidis WUE 2594]
          Length = 336

 Score = 50.2 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 42/218 (19%), Positives = 62/218 (28%), Gaps = 49/218 (22%)

Query: 174 FNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSP------ 227
           F+Y IL   D +    N +  +   G DQ  ++    D+  R         T P      
Sbjct: 136 FSYPILMTADILMFNAN-EVPV---GRDQIQHVEMARDIAGRFNYRFQELFTLPEVKIDE 191

Query: 228 ---LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWR---------NIDDAD-VVSFAK 274
              LL    G KM K+    I L +                         D   +    K
Sbjct: 192 NVELLVGLDGRKMSKSYGNTIPLWENDKKTQKSVNKIITNMKEPGEPKQPDESPLFEIYK 251

Query: 275 RLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQ 334
             +T   +         G    EAKK++A +I   +    E   A TA            
Sbjct: 252 AFSTPSETVEFTKMLADGLAWGEAKKLLAAKINAELAEPRERYNALTA---------DPS 302

Query: 335 HMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHL 372
            +  I                 ++AG   +  EAR  L
Sbjct: 303 QIEEI-----------------LQAGAQKARKEARELL 323


>gi|229473319|gb|ACQ73211.1| tryptophanyl-tRNA synthetase 1 [Streptomyces griseus subsp.
           griseus]
          Length = 352

 Score = 50.2 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 48/296 (16%), Positives = 92/296 (31%), Gaps = 45/296 (15%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   TA S H G+    +  +   +  H    ++    + I  P             E++
Sbjct: 26  GIQPTAGSFHLGNYLGAVRQWVALQESHDAFYMVVDLHA-ITVPQ---------DPAELR 75

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLS-FESV 159
            N         +       +    + ++      + +  ++  +  F   +RM    +  
Sbjct: 76  ANTRLAVAQLLAAG-LDPDRCTLFVQSHVPEHAQLGW--VMNCLTGFGEASRMTQFKDKS 132

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             +     ++    F Y +LQ  D + L +     +   G DQ  +I    DL ER    
Sbjct: 133 AKQGADRATVGL--FTYPVLQVADIL-LYQANQVPV---GEDQRQHIELTRDLAERFNGR 186

Query: 220 KLFALTSPLL-----------TTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRN-IDDA 267
                T P                   KM K+ S    L   +  P    +  ++ + D 
Sbjct: 187 YGQTFTVPAPYILKETAKIFDLQDPAVKMSKSASTPKGLINLLDDPKATAKKVKSAVTDT 246

Query: 268 D------------VVSFAKRLTTLPMSEIDRMAKL-QGKEINEAKKIIATEITTMV 310
           D            V +    L+TL  S ++ + +  +GK     K  +A  +   V
Sbjct: 247 DTVIRFDAEKKPGVSNLLTILSTLSGSPVEDLERRYEGKGYGALKTDVAEAMVEFV 302


>gi|258546075|ref|ZP_05706309.1| tryptophan--tRNA ligase [Cardiobacterium hominis ATCC 15826]
 gi|258518674|gb|EEV87533.1| tryptophan--tRNA ligase [Cardiobacterium hominis ATCC 15826]
          Length = 336

 Score = 50.2 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 21/94 (22%), Positives = 35/94 (37%), Gaps = 13/94 (13%)

Query: 166 EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALT 225
           +  +S   F+Y +L A D +     +   + +G  DQ  ++    D+  R          
Sbjct: 128 DHGISMGLFSYPVLMAADILIFNATH---IPVG-RDQIQHVEMARDIAGRFNHRYRELFV 183

Query: 226 SP---------LLTTASGTKMGKTLSGAIWLNKE 250
            P         LLT   G KM K+    I L ++
Sbjct: 184 LPEAVVDDEIALLTGLDGRKMSKSYGNTIALFED 217


>gi|212703916|ref|ZP_03312044.1| hypothetical protein DESPIG_01969 [Desulfovibrio piger ATCC 29098]
 gi|212672619|gb|EEB33102.1| hypothetical protein DESPIG_01969 [Desulfovibrio piger ATCC 29098]
          Length = 319

 Score = 50.2 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 28/224 (12%), Positives = 66/224 (29%), Gaps = 40/224 (17%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
            T   LH GH   ++  +   +   +    +    ++  D +           + +++ +
Sbjct: 3   PTGP-LHLGHYFGVLKNWVGLQHTEEAYFFVADWHALTSDYADPSNI-ATNVEEMVKDWV 60

Query: 104 EKIKGIFSSFIKYGTGKTDA-------LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSF 156
                     I   +   +         M+   +WL                   ++ + 
Sbjct: 61  AAGLDPEKCVIFRQSAVKEHAELSLLLSMITPVSWLERNPTY--------KEQQQQITNK 112

Query: 157 ESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL 216
           +                  Y +L A D + + + +   +   G DQ  ++    ++  R 
Sbjct: 113 DL------GNAGF----LCYPVLMAADIL-MYRPHGVPV---GEDQLPHMELTREIARRF 158

Query: 217 K-------TPKLFALTSPLL--TTASGTKMGKTLSGAIWLNKEM 251
                    P+  A+ +P        G KM K+ +  I+L   M
Sbjct: 159 NYLYGGNFFPEPQAMLTPAAKCPGLDGRKMSKSYNNGIFLRDTM 202


>gi|113912165|gb|AAI22624.1| YARS protein [Bos taurus]
          Length = 528

 Score = 50.2 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 42/230 (18%), Positives = 69/230 (30%), Gaps = 23/230 (10%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R    ++    +L  +  +  +  Y G   T    H  +   +  +    K G +  
Sbjct: 13  LITRNL-QEVLGEEKLKEILKERELKVYWGTATTGKP-HVAYFVPMSKIADFLKAGCEVT 70

Query: 72  SLMGGGTSII---GDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
            L     + +     P    E R       I+  +E I       +++  G         
Sbjct: 71  ILFADLHAYLDNMKAPWELLELRTSYYENVIKAMLESIGVPLEK-LRFIKGTDYQ----- 124

Query: 129 ETWLCSIKYIDLLREIGSFFSV-NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
              L     +D+ R          +    E V+   + E  L      Y  LQA D   L
Sbjct: 125 ---LSKEYTLDVYRLSSVVTQHDAKKAGAEVVK---QVEHPL-LSGLLYPGLQALDEEYL 177

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
                   Q GG DQ             L   K   L +P++   +G+KM
Sbjct: 178 K----VDAQFGGVDQRKIFTFAEKYLPALGYSKRIHLMNPMVPGLTGSKM 223


>gi|46126117|ref|XP_387612.1| hypothetical protein FG07436.1 [Gibberella zeae PH-1]
          Length = 398

 Score = 50.2 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 50/261 (19%), Positives = 90/261 (34%), Gaps = 30/261 (11%)

Query: 13  SER-GFI----HQISNPRELDILCSQGVV-TAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
            ER G I     ++ NP  ++ + ++G     Y G   T    H G+L   + +      
Sbjct: 6   EERLGLIKENLAEVLNPEIIEGILAEGRSPKIYWGTATTGRP-HCGYLVPAVKIAQYLAA 64

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK---YGTGKTDA 123
           G +   L+      + +             + +++  E  K +  S +K     T +   
Sbjct: 65  GCEVTVLLADIHGFLDNLKA--------PIELVEKRAEYYKFVVESMLKSCGVSTEQLRF 116

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSV-NRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
           ++ ++         +DL R          +    E V+        LS L   Y +LQ  
Sbjct: 117 VLGSSYQKTSGY-VMDLYRLSSVVSEHDAKKAGAEVVKQ--TGNAPLSGL--MYPLLQVL 171

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           D   L    DC +Q GG DQ        +   +L   K   L +P++   +G KM  +  
Sbjct: 172 DEQYL----DCDIQFGGVDQRKLFAAATEWLPKLGYRKRAHLMNPMVAGLNGNKMSSSDE 227

Query: 243 GAIWLNKEMTSPYNFWQYWRN 263
            +      + SP    +  R 
Sbjct: 228 NS--KIDLLDSPEAVTKKIRK 246


>gi|282863847|ref|ZP_06272905.1| tryptophanyl-tRNA synthetase [Streptomyces sp. ACTE]
 gi|282561548|gb|EFB67092.1| tryptophanyl-tRNA synthetase [Streptomyces sp. ACTE]
          Length = 352

 Score = 50.2 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 43/241 (17%), Positives = 76/241 (31%), Gaps = 36/241 (14%)

Query: 22  SNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQ-LMLLFWLQKTGHKPISLMGGGTSI 80
           S   E  I           G   T + LH GH    L     LQ  G     L+      
Sbjct: 16  SAELEQRIALDPSGFRVLSGDRPTGA-LHLGHYFGTLRNRVRLQDLGVDVFVLIADY--- 71

Query: 81  IGDPSFRDESRRMMRSQEIQENI-EKIKGIFSSFIKYGTGKTDALMLNNETWLC-SIKYI 138
                      +++  ++I E + E ++G+   ++  G       + N+      +   +
Sbjct: 72  -----------QVLTDRDIAERLSEHVEGLLLDYLAIGIDPARTTVFNHSAVPALNQLLL 120

Query: 139 DLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMG 198
             L  +            + +     R+ ++S L + Y + QA D +    N    L   
Sbjct: 121 PFLSLVSVAELGRNPTVKDEIA--HSRQAAVSGLMYTYPVHQAADILFCKGN----LVPV 174

Query: 199 GSDQWGNIICGIDLGERLKTPKLFALTSP----------LLTTASGTKMGKTLSGAIWLN 248
           G DQ  ++     +  R      +    P          LL    GTKM K+   ++ L 
Sbjct: 175 GQDQLPHLEVTRTVARRFNER--YGAVFPEPDALLSAAPLLLGTDGTKMSKSRHNSVALG 232

Query: 249 K 249
            
Sbjct: 233 A 233


>gi|226292185|gb|EEH47605.1| tyrosyl-tRNA synthetase [Paracoccidioides brasiliensis Pb18]
          Length = 384

 Score = 50.2 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 40/213 (18%), Positives = 62/213 (29%), Gaps = 22/213 (10%)

Query: 32  SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSII---GDPSFRD 88
               +  Y G   T    H G+   ++ L    + G     L+      +     P    
Sbjct: 34  QNRPLKVYFGTATTGRP-HCGYFCPIVKLAHFLQAGCHVKILLADIHGFLDNLKAPINLV 92

Query: 89  ESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFF 148
             R       I   +E I                         L +   +DL R      
Sbjct: 93  NYRAEYYRYVITALLEAIHVPIEKLEFVLGSDYQ---------LSARYTMDLFRLSSVVT 143

Query: 149 SV-NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNII 207
               +    E V+        LS L   Y ++QA D   L    D   Q GG DQ     
Sbjct: 144 EHDAKKAGAEVVKQ--VDNAPLSGL--IYPLMQALDEEHL----DVDAQFGGVDQRKIFA 195

Query: 208 CGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
             +D   R+   +   L +P++   +G KM  +
Sbjct: 196 LALDTLPRIGYKERAHLMNPMVPGLAGGKMSAS 228


>gi|89889677|ref|ZP_01201188.1| tryptophanyl-tRNA synthetase [Flavobacteria bacterium BBFL7]
 gi|89517950|gb|EAS20606.1| tryptophanyl-tRNA synthetase [Flavobacteria bacterium BBFL7]
          Length = 322

 Score = 50.2 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 38/224 (16%), Positives = 65/224 (29%), Gaps = 39/224 (17%)

Query: 50  HAGHLTQLML--LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIK 107
           H G+L   +L  +    +  +     +    S+        E+ R          +    
Sbjct: 15  HLGNLLGAILPAVEMSAQKENDAFLFIADLHSLTQIKDG--ETLRENTYSTAAAWLACGL 72

Query: 108 GIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ 167
            I  +     +       LN   W            +  FF   R+    S + +  R Q
Sbjct: 73  DINETTFYRQSDVPQVTELN---WY-----------LNCFFPYQRLTLAHSFKDKADRLQ 118

Query: 168 SLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQ------------WGNIICGIDLGER 215
            ++   F Y +L A D +     YD ++   G DQ              N   G  L E 
Sbjct: 119 DVNAGLFTYPMLMAADILL----YDAQVVPVGKDQLQHIEITREVAGKFNNAMGETLIEP 174

Query: 216 LKTPKLFALTSPLLTTASGTKMGKTLSGA--IWLNKEMTSPYNF 257
               +   +   L+    G KM K+      I+L  +       
Sbjct: 175 EGKIQESTM---LVPGTDGDKMSKSKGNYINIFLADKKLRKQVM 215


>gi|221194390|ref|ZP_03567447.1| tryptophanyl-tRNA synthetase [Atopobium rimae ATCC 49626]
 gi|221185294|gb|EEE17684.1| tryptophanyl-tRNA synthetase [Atopobium rimae ATCC 49626]
          Length = 349

 Score = 50.2 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 34/215 (15%), Positives = 66/215 (30%), Gaps = 31/215 (14%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN 102
            T   LH GH    ++    LQ  G     ++                  +      +  
Sbjct: 36  PTGR-LHLGHYFGTIVERVRLQNLGVHTNVIIADYQV-------------ITDRDTTEHI 81

Query: 103 IEKIKGIFSSFIKYG-TGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
            + +  +   ++  G   +   +  ++     +   +  L  +     +           
Sbjct: 82  ADNVYNMVVDYLACGIDPEKTMIFTHSAIPALNQLMLPFLSLVTEAELLRNPTVK---AE 138

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIIC----GIDLGERLK 217
           +     +L+ L   Y + QA D   L    +      G DQ  +I           ER  
Sbjct: 139 QEASGHALTGLLLTYPVHQACD--ILFCKGNIV--PVGRDQLPHIELTGKIARRFNERYG 194

Query: 218 T--PKLFAL--TSPLLTTASGTKMGKTLSGAIWLN 248
              P++  L  ++PL+    G KM K+   AI L+
Sbjct: 195 KVFPEVSGLLTSTPLIPGLDGRKMSKSYGNAISLS 229


>gi|67970555|dbj|BAE01620.1| unnamed protein product [Macaca fascicularis]
          Length = 489

 Score = 50.2 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 43/230 (18%), Positives = 70/230 (30%), Gaps = 23/230 (10%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R    ++    +L  +  +  +  Y G   T    H  +   +  +    K G +  
Sbjct: 13  LITRNL-QEVLGEDKLKEILKERELKIYWGTATTGKP-HVAYFVPMSKIADFLKAGCEVT 70

Query: 72  SLMGGGTSII---GDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
            L     + +     P    E R       I+  +E I       +K+  G         
Sbjct: 71  ILFADLHAYLDNMKAPWELLELRVSYYENVIKAMLESIGVPLEK-LKFIKGTDYQ----- 124

Query: 129 ETWLCSIKYIDLLREIGSFFSV-NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
              L     +D+ R         ++    E V+   + E  L      Y  LQA D   L
Sbjct: 125 ---LSKEYTLDVYRLSSVVTQHDSKKAGAEVVK---QVEHPL-LSGLLYPGLQALDEEYL 177

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
                   Q GG DQ             L   K   L +P++   +G+KM
Sbjct: 178 K----VDAQFGGVDQRKIFTFAEKYLPALGYSKRVHLMNPMVPGLTGSKM 223


>gi|237739915|ref|ZP_04570396.1| tryptophanyl-tRNA synthetase [Fusobacterium sp. 2_1_31]
 gi|229423523|gb|EEO38570.1| tryptophanyl-tRNA synthetase [Fusobacterium sp. 2_1_31]
          Length = 325

 Score = 50.2 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 38/282 (13%), Positives = 84/282 (29%), Gaps = 41/282 (14%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   +   LH G+    M  F   ++ +     +    S+            +   + ++
Sbjct: 7   GIQPSGI-LHLGNYFGAMKQFVDLQSDYDGFYFIADYHSLTS----------LTSPETLR 55

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           EN   I  +    I     K+   + +N      + ++     + +   +  +    S +
Sbjct: 56  ENTYNIV-LDYLAIGLDPSKSTIFLQSNVPEHTELTWL-----LSNITPIGLLERGHSYK 109

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP- 219
            +  +    +     Y +L A D +     YD  +   G DQ  ++    D+  +     
Sbjct: 110 DKTAKGIPANTGLLTYPVLMAADILI----YDSDVVPVGKDQKQHLEMTRDIAMKFNQQY 165

Query: 220 --KLFALTSPLLT-------TASGTKMGKTLSGAI--WLNKEMTSPYNFWQYWRNI---- 264
             + F L  PL+           G KM K+ +  I  ++ K+            +     
Sbjct: 166 GVEFFKLPEPLILDDSAIVPGTDGQKMSKSYNNTINMFVTKKKLKEQVMSIVTDSTPLEE 225

Query: 265 ---DDADVVSFAKRLTTLPMS-EIDRMAKLQGKEINEAKKII 302
               D ++         +    E+             AK  +
Sbjct: 226 PKNPDNNIAKLYALFNNIDKQNELKEKFLAGNFGYGHAKTEL 267


>gi|257462214|ref|ZP_05626631.1| tryptophanyl-tRNA synthetase [Fusobacterium sp. D12]
 gi|317059884|ref|ZP_07924369.1| tryptophanyl-tRNA synthetase [Fusobacterium sp. D12]
 gi|313685560|gb|EFS22395.1| tryptophanyl-tRNA synthetase [Fusobacterium sp. D12]
          Length = 326

 Score = 50.2 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 36/237 (15%), Positives = 70/237 (29%), Gaps = 32/237 (13%)

Query: 144 IGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQW 203
           + +   V  +    S + +L +  + +   FNY  L A D +     YD  +   G DQ 
Sbjct: 93  LCNVAPVGLLERAHSYKDKLAKGFTPNMGLFNYPALMAADILI----YDADVVPVGKDQK 148

Query: 204 GNIICGIDLGERLKTP---KLFALTSPLLT-------TASGTKMGKTLSGAI-WLNKEMT 252
            ++    D+  +         F L  PL+           G KM K+    I     +  
Sbjct: 149 QHLEMTRDIAMKFNQQYEVDFFKLPEPLILDKVAVVPGTDGQKMSKSYGNTIQMFAPKKQ 208

Query: 253 SPYNFWQYWRNI------------DDADVVSFAKRLTTLPMS-EIDRMAKLQGKEINEAK 299
                 Q   +I             D ++        ++    E+             AK
Sbjct: 209 LK----QQVMSIVTDSTPLEEPKNPDNNIAKLYALFASIEKQNEMKEKFLAGHYGYGHAK 264

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLI 356
             +   I        E  +A     +  +  +        +I+  +V     ++ L+
Sbjct: 265 TELLNTILEYFGQAREKREALEQNPKYVEDILQEGAKKARAIASKKVQEAKEIVGLL 321


>gi|169630762|ref|YP_001704411.1| tryptophanyl-tRNA synthetase [Mycobacterium abscessus ATCC 19977]
 gi|169242729|emb|CAM63757.1| Tryptophanyl-tRNA synthetase (TrpS) [Mycobacterium abscessus]
          Length = 340

 Score = 50.2 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 54/301 (17%), Positives = 97/301 (32%), Gaps = 55/301 (18%)

Query: 41  GYDLTASSLHAGHLT----QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRS 96
           G   TA SLH G++     Q + L    +     + L     ++  DP    E RR    
Sbjct: 14  GIQPTADSLHLGNVLGAVQQWVRLQHEYEALFCVVDL--HAITVAQDPE---ELRRR-TR 67

Query: 97  QEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSF 156
             + + +        S I +      A       W        +L  +  +    RM  F
Sbjct: 68  AVVAQYVALGVDPAKSAI-FVQSHVPAHAE--LAW--------VLGCLTGYGEAARMTQF 116

Query: 157 ESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL 216
           +  +S  +   + +   F Y +L A D + L +     +   G DQ  ++    D+ +R 
Sbjct: 117 KD-KSAKQGNDATTVGLFTYPVLMAADIL-LYQTNVVPV---GDDQRQHLELTRDVAQRF 171

Query: 217 KTPKLFALTSPLLTT-------------ASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
                +  T  L  T                 KM K+ S    L   +  P    +  ++
Sbjct: 172 NGR--YGQTFVLPETFVPKNAARIYDLQDPTVKMSKSASTPAGLINLLDEPAVSAKKVKS 229

Query: 264 -IDDAD------------VVSFAKRLTTLPMSEIDR-MAKLQGKEINEAKKIIATEITTM 309
              D+D            V +     + L  ++I+  +    G+   + KK  A  +   
Sbjct: 230 AQTDSDREIRFDRDAKPGVSNLLSIQSALTGADIETLVDGYAGRGYGDLKKDTAEALIEF 289

Query: 310 V 310
           V
Sbjct: 290 V 290


>gi|34541667|ref|NP_906146.1| tryptophanyl-tRNA synthetase [Porphyromonas gingivalis W83]
 gi|188994001|ref|YP_001928253.1| tryptophanyl-tRNA synthetase [Porphyromonas gingivalis ATCC 33277]
 gi|39932024|sp|Q7MT94|SYW_PORGI RecName: Full=Tryptophanyl-tRNA synthetase; AltName:
           Full=Tryptophan--tRNA ligase; Short=TrpRS
 gi|34397985|gb|AAQ67045.1| tryptophanyl-tRNA synthetase [Porphyromonas gingivalis W83]
 gi|188593681|dbj|BAG32656.1| putative tryptophanyl-tRNA synthetase [Porphyromonas gingivalis
           ATCC 33277]
          Length = 327

 Score = 50.2 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 47/296 (15%), Positives = 85/296 (28%), Gaps = 49/296 (16%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMR--SQE 98
           G   T + LH G+    +  F   +  +     +    S+   P   +  R +    ++ 
Sbjct: 7   GIRPTGN-LHLGNYFGAIRSFLDMQHRYNCFFFIADWHSLTTHPHPDNIVRNVRTILAEY 65

Query: 99  IQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
           +   I+  K                L LN   +L  ++     +E       N       
Sbjct: 66  LACGIDPEKATIYVQSDVREVLELYLYLNMNAYLGELERTTSFKEKARKQPNNV------ 119

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
                     L      Y  L A D + + +     +   G DQ  N+        R  T
Sbjct: 120 -------NAGL----LTYPTLMAADIL-IHRAVKVPV---GKDQEQNMEMARKFARRFNT 164

Query: 219 ---------PKLF--ALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWR---- 262
                    P+ F    T+  +    G+ KMGK+   AI+L  +  +             
Sbjct: 165 IYEVDFFPEPESFSPGATALKVPGLDGSGKMGKSEGNAIYLADDAKTISKKVMKAVTDAG 224

Query: 263 -----NIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE----INEAKKIIATEITTM 309
                ++    V +    L  +   E+ R              + KK +A +I   
Sbjct: 225 PEVPNSVKPEPVENLFSMLRIVSSDEVYRHFDDLYNNCSIRYGDLKKQLAADIVAF 280


>gi|296490153|gb|DAA32266.1| tyrosyl-tRNA synthetase, cytoplasmic [Bos taurus]
          Length = 528

 Score = 50.2 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 42/230 (18%), Positives = 69/230 (30%), Gaps = 23/230 (10%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R    ++    +L  +  +  +  Y G   T    H  +   +  +    K G +  
Sbjct: 13  LITRNL-QEVLGEEKLKEILKERELKVYWGTATTGKP-HVAYFVPMSKIADFLKAGCEVT 70

Query: 72  SLMGGGTSII---GDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
            L     + +     P    E R       I+  +E I       +++  G         
Sbjct: 71  ILFADLHAYLDNMKAPWELLELRTSYYENVIKAMLESIGVPLEK-LRFIKGTDYQ----- 124

Query: 129 ETWLCSIKYIDLLREIGSFFSV-NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
              L     +D+ R          +    E V+   + E  L      Y  LQA D   L
Sbjct: 125 ---LSKEYTLDVYRLSSVVTQHDAKKAGAEVVK---QVEHPL-LSGLLYPGLQALDEEYL 177

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
                   Q GG DQ             L   K   L +P++   +G+KM
Sbjct: 178 K----VDAQFGGVDQRKIFTFAEKYLPALGYSKRIHLMNPMVPGLTGSKM 223


>gi|170016559|ref|YP_001727478.1| tryptophanyl-tRNA synthetase [Leuconostoc citreum KM20]
 gi|169803416|gb|ACA82034.1| Tryptophanyl-tRNA synthetase [Leuconostoc citreum KM20]
          Length = 338

 Score = 50.2 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 37/250 (14%), Positives = 71/250 (28%), Gaps = 47/250 (18%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     +Q +G + P  ++    +   +    ++ R+ +    +  
Sbjct: 12  PTGK-LHIGHYIGSLKNRVIMQDSGAYDPFVMIADTQAFTDNARNPEKIRQSLTEVALDY 70

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIG-SFFSVNRMLSFESVR 160
               I             KT   + +    L  +     +  +  +    N  +  E  +
Sbjct: 71  LAVGI----------DPAKTTIFVQSQIKGLFELTEY-FMNLVSVARLQRNPTVKSEIAQ 119

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP- 219
                     FL   Y + QA D + + +     +   G DQ   I    +L        
Sbjct: 120 KGFGESIPAGFL--TYPVSQAAD-ITIFRATKVPV---GDDQEPMIEQTRELVRAFNNAY 173

Query: 220 ------KLFALTSPL----LTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDAD 268
                 +   +  P     L    G  KM K+L   I+++ +               D  
Sbjct: 174 NTDVLVEPVGVFPPKGQGRLPGIDGNAKMSKSLGNGIYISDDA--------------DTL 219

Query: 269 VVSFAKRLTT 278
           V       T 
Sbjct: 220 VKKVKAMYTD 229


>gi|281207412|gb|EFA81595.1| tyrosine-tRNA ligase [Polysphondylium pallidum PN500]
          Length = 388

 Score = 50.2 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 40/228 (17%), Positives = 86/228 (37%), Gaps = 21/228 (9%)

Query: 19  HQISNPRELDILC-SQGVVTAYIGYDLTASSLHA--GHLTQLMLLFWLQKTGHKPISLMG 75
            +I +   L+ L  ++  +  Y G++ +   +H   G L  + +   + K G   +  + 
Sbjct: 54  EEIISEENLEKLLTAKERLICYDGFEPSGR-MHIAQGILKSINV-NRMTKAGCTFVFWVA 111

Query: 76  GGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSI 135
              +++ +    D ++     Q + E  +       + +K+     +     N+ WL  +
Sbjct: 112 DWFAMLNNKMGGDLNKIRKVGQYLIEIWKATGMDMEN-VKFLWSSDEINKNANDYWLKVM 170

Query: 136 KYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRL 195
                  +I   F++ R+     +  R   E  LS  +  Y  +Q  D   L  +  C+L
Sbjct: 171 -------DISRKFNIPRIKRCAQIMGR-NDEDDLSVAQVLYPCMQCADIFYLKADI-CQL 221

Query: 196 QMGGSDQWGNIICGIDLGERLKT--PKLFALTSPLLTTASGT-KMGKT 240
              G DQ    +  ++  ++LK     +      L+    G  KM K+
Sbjct: 222 ---GMDQRKVNMLALEYCDKLKMKHKPVIVSHHMLMGLKEGQEKMSKS 266


>gi|332026599|gb|EGI66708.1| Tyrosyl-tRNA synthetase, cytoplasmic [Acromyrmex echinatior]
          Length = 522

 Score = 50.2 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 38/233 (16%), Positives = 67/233 (28%), Gaps = 21/233 (9%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R     + + + L  +  +  +  Y G   T    H G+   +  +    +   +  
Sbjct: 12  LITRNLAEWLGDEK-LKNILKERDLKLYWGTATTGKP-HIGYFVPMSKIADFLRAQTEVT 69

Query: 72  SLMGGGTSII---GDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
            L     + +     P    E R       I+  ++ I       +K+  G         
Sbjct: 70  ILFADLHAYLDNMKAPWELLELRTQYYEAIIKSILKSIDVPLDK-LKFIKGTDFQ----- 123

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
              L     +D+ R        +   +   V  ++            Y  LQA D   L 
Sbjct: 124 ---LSKEYTLDVYRLSSLVTEHDAKKAGAEVVKQVSNPL---LSGLLYPGLQALDEYHLK 177

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
                  Q GG DQ             L   K   L +P++   +G KM  + 
Sbjct: 178 ----VDAQFGGVDQRKIFTFSEKYLPMLGYEKHIHLMNPMIPGLAGAKMSSSE 226


>gi|94733607|emb|CAK04285.1| tyrosyl-tRNA synthetase [Danio rerio]
          Length = 228

 Score = 50.2 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 45/236 (19%), Positives = 73/236 (30%), Gaps = 25/236 (10%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            L  R    ++     L  +  +  +  Y G   T    H  +   +  +    K G + 
Sbjct: 12  QLITRNL-QEVLGEERLKEILKERELKVYWGTATTGKP-HVAYFVPMSKIADFLKAGCEV 69

Query: 71  ISLMGGGTSII---GDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
             L     + +     P    E R     Q I+  +E I       +K+  G        
Sbjct: 70  TILFADLHAYLDNMKAPWELLELRVKYYEQVIKAMLESIGVPLDK-LKFVKGTDYQ---- 124

Query: 128 NETWLCSIKYIDLLREIGSFFSV--NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
               L     +D+ R + S  +    +    E V+   + E  L      Y  LQA D  
Sbjct: 125 ----LSREYTLDVYR-LSSMVTEHDAKKAGAEVVK---QVEHPL-LSGLLYPGLQALDEE 175

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            L        Q GG DQ             L   K   L +P++   +G+KM  + 
Sbjct: 176 YLK----VDAQFGGVDQRKIFTLAEKYLPSLGYTKRSHLMNPMVPGLTGSKMSSSE 227


>gi|260432945|ref|ZP_05786916.1| ribosomal large subunit pseudouridine synthase B [Silicibacter
           lacuscaerulensis ITI-1157]
 gi|260416773|gb|EEX10032.1| ribosomal large subunit pseudouridine synthase B [Silicibacter
           lacuscaerulensis ITI-1157]
          Length = 291

 Score = 50.2 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 23/51 (45%), Gaps = 1/51 (1%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
             G  +  ++ +AG A S  EA R +++  + +N   I +  L +   D  
Sbjct: 27  PPGDRIAKVLARAGIA-SRREAERMIEAGRVTVNGKTIDSPALNVTPSDRI 76


>gi|139439083|ref|ZP_01772535.1| Hypothetical protein COLAER_01541 [Collinsella aerofaciens ATCC
           25986]
 gi|133775430|gb|EBA39250.1| Hypothetical protein COLAER_01541 [Collinsella aerofaciens ATCC
           25986]
          Length = 349

 Score = 50.2 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 48/240 (20%), Positives = 78/240 (32%), Gaps = 33/240 (13%)

Query: 20  QISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGT 78
           Q SN     +  +    T   G   T   LH GH    +     LQ  G K   L+    
Sbjct: 12  QKSNDIREGLAKTPEKFTMLTGDRPTGR-LHLGHYFGTLKGRVELQNMGAKTNVLIADY- 69

Query: 79  SIIGDPSFRDESRRMMRSQEIQENIEKI-KGIFSSFIKYGTGKTDALMLNNETWLCSIKY 137
                 + RD       ++ IQ+N+  +     +  I        A          +   
Sbjct: 70  ---QVITDRD------TTEHIQDNVYNMVMDYLACGIDPDKTMIYAHSAVPA---ANQLM 117

Query: 138 IDLLREIGSFFSVNRMLSFESVRSRLK-REQSLSFLEFNYMILQAYDFVELAKNYDCRLQ 196
           +  L  +             +V++ ++     L+ L   Y + QA D   L    +    
Sbjct: 118 LPFLSLVSEAELARNP----TVKAEMEASGHELTGLLLTYPVHQACD--ILFCKGNVV-- 169

Query: 197 MGGSDQWGNIICGIDLGERLKT------PKLFALT--SPLLTTASGTKMGKTLSGAIWLN 248
             G DQ  +I     +  R         P++ AL   +PLL    G KM K+   AI ++
Sbjct: 170 PVGRDQLPHIELTRTIARRFNNRYGKVFPEVDALLSETPLLPGLDGRKMSKSYGNAINIS 229


>gi|331242259|ref|XP_003333776.1| tyrosyl-tRNA synthetase [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
 gi|309312766|gb|EFP89357.1| tyrosyl-tRNA synthetase [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
          Length = 428

 Score = 49.8 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 44/260 (16%), Positives = 78/260 (30%), Gaps = 55/260 (21%)

Query: 1   MPAFKSDFLS-----ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLT 55
           M    S+ LS      L  R     + +   L +   +G V        T    H G+  
Sbjct: 1   MSTTTSETLSATERYELITRNLGEVLGSQELLKLCQEEGRVI-------TCYWAHIGYFV 53

Query: 56  QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK 115
            L  +    + G +   L+    + +      D  +  +  + I + +     I  +   
Sbjct: 54  PLTKIADFLRAGVRVKVLLADVHAFL------DNLKAPL--ELINQRVSYYSHILRAVF- 104

Query: 116 YGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES------VRSR------- 162
                T   +         I  ++ +   GS +  +   + +       V  R       
Sbjct: 105 -----TSIGV--------PIDRLEFIT--GSSYQYSTPYNKDCLKLASLVSERDARKAGS 149

Query: 163 --LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
             +K   +       Y +LQA D   L        Q GG DQ            RL   K
Sbjct: 150 EVVKESDAPPLSGLLYPLLQALDEEYLK----VDFQFGGIDQRKIFTFAELYLPRLGYAK 205

Query: 221 LFALTSPLLTTASGTKMGKT 240
              L + ++   +GTKM  +
Sbjct: 206 RIHLMNTMVPGLTGTKMSSS 225


>gi|62898948|dbj|BAD97328.1| tyrosyl-tRNA synthetase variant [Homo sapiens]
          Length = 528

 Score = 49.8 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 43/230 (18%), Positives = 70/230 (30%), Gaps = 23/230 (10%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R    ++    +L  +  +  +  Y G   T    H  +   +  +    K G +  
Sbjct: 13  LITRNL-QEVLGEEKLKEILKERELKIYWGTATTGKP-HVAYFVPMSKIADFLKAGCEVT 70

Query: 72  SLMGGGTSII---GDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
            L     + +     P    E R       I+  +E I       +K+  G         
Sbjct: 71  ILFADLHAYLDNMKAPWELLELRVSYYENVIKAMLESIGVPLEK-LKFIKGTDYQ----- 124

Query: 129 ETWLCSIKYIDLLREIGS-FFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
              L     +D+ R         ++    E V+   + E  L      Y  LQA D   L
Sbjct: 125 ---LSKEYTLDVYRLSSVVTQRDSKKAGAEVVK---QVEHPL-LSGLLYPGLQALDEEYL 177

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
                   Q GG DQ             L   K   L +P++   +G+KM
Sbjct: 178 K----VDAQFGGIDQRKIFTFAEKYLPALGYSKRVHLMNPMVPGLTGSKM 223


>gi|241026726|ref|XP_002406257.1| tyrosyl-tRNA synthetase, putative [Ixodes scapularis]
 gi|215491907|gb|EEC01548.1| tyrosyl-tRNA synthetase, putative [Ixodes scapularis]
          Length = 524

 Score = 49.8 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 40/234 (17%), Positives = 71/234 (30%), Gaps = 23/234 (9%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R    ++     ++ +  +  +  Y G   T    H  +   +  +    K G +  
Sbjct: 21  LVSRNL-QEVLGDARMNEIMKERDLKIYWGTATTGKP-HVAYFVPMSKIADFLKAGCEVT 78

Query: 72  SLMGGGTSII---GDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
            L     + +     P    E R       I+  +  I       +++  G +       
Sbjct: 79  ILFADLHAYLDNMKAPWDLLELRVQYYEHVIKAMLTSIGVPLEK-LRFVKGSSYQ----- 132

Query: 129 ETWLCSIKYIDLLREIGSFFSV-NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
              L     +D+ R +        +    E V+   + +  L      Y  LQA D   L
Sbjct: 133 ---LGREFSLDVYRLVSMVTEHDAKKAGAEVVK---QVDHPL-LSSMLYPCLQALDEEYL 185

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
                   Q GG DQ            +L   K   L +P++   SG KM  + 
Sbjct: 186 H----VDAQFGGVDQRKIFTFSEKYLPQLGYEKRIHLMNPMVPGLSGGKMSSSE 235


>gi|304387134|ref|ZP_07369381.1| tryptophan--tRNA ligase [Neisseria meningitidis ATCC 13091]
 gi|304338786|gb|EFM04893.1| tryptophan--tRNA ligase [Neisseria meningitidis ATCC 13091]
          Length = 336

 Score = 49.8 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 41/218 (18%), Positives = 62/218 (28%), Gaps = 49/218 (22%)

Query: 174 FNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSP------ 227
           F+Y IL   D +    N +  +   G DQ  ++    D+  R         T P      
Sbjct: 136 FSYPILMTADILMFNAN-EVPV---GRDQIQHVEMARDIAGRFNHRFRELFTLPEVKIDE 191

Query: 228 ---LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWR---------NIDDAD-VVSFAK 274
              LL    G KM K+    I L +                         D   +    K
Sbjct: 192 NVELLVGLDGRKMSKSYGNTIPLWENDKKTQKSVNKIITNMKEPGEPKQPDESPLFEIYK 251

Query: 275 RLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQ 334
             +T   +         G    EAKK++A +I        E  +      E    +    
Sbjct: 252 AFSTPSETVEFTKMLADGLAWGEAKKLLAAKINA------ELAEPRERYNEL---TADPS 302

Query: 335 HMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHL 372
            +  I                 ++AG A +  EAR  L
Sbjct: 303 QIEEI-----------------LQAGAAKARKEARELL 323


>gi|126727512|ref|ZP_01743346.1| RNA pseudouridylate synthase family protein [Rhodobacterales
           bacterium HTCC2150]
 gi|126703292|gb|EBA02391.1| RNA pseudouridylate synthase family protein [Rhodobacterales
           bacterium HTCC2150]
          Length = 259

 Score = 49.8 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 27/55 (49%), Gaps = 1/55 (1%)

Query: 344 DEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
           D   +G  +  ++ +AG A S  EA R +++  + +N  +I +  L +  +D   
Sbjct: 3   DTPEKGDRIAKVLSRAGIA-SRREAERMIEAGRVSVNGKVIPSPALNVTPKDKIK 56


>gi|156358447|ref|XP_001624530.1| predicted protein [Nematostella vectensis]
 gi|156211317|gb|EDO32430.1| predicted protein [Nematostella vectensis]
          Length = 540

 Score = 49.8 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 40/239 (16%), Positives = 69/239 (28%), Gaps = 31/239 (12%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            L  R    ++     L +L     +  Y G   T    H  +   +  +      G + 
Sbjct: 17  QLITRNL-QEVIGDDRLKVLLKTQNLKLYWGTATTGRP-HVAYFVPMTKIADFLHAGCEV 74

Query: 71  ISLMGGGTSII---GDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
             L+    + +     P    E R     + I+  +E I       +K+  G        
Sbjct: 75  TILLADLHAYLDNLKAPWELLEHRVKYYEELIKAMLESINVPLDK-LKFVKG-------- 125

Query: 128 NETWLCSIKYIDLLREIGSFFSVNR-----MLSFESVRSRLKREQSLSFLEFNYMILQAY 182
                      D + ++    ++           E V+   + +  L      Y  LQA 
Sbjct: 126 ----TEYQLNKDYILDVFKMTTIATEHDCKKAGAEVVK---QVQHPL-LSGLLYPGLQAL 177

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
           D   L        Q GG DQ             L   K   L +P++   +G KM  + 
Sbjct: 178 DEEYLK----VDAQFGGVDQRKIFTFAEKYLPNLGYQKRIHLMNPMVPGLTGGKMSSSE 232


>gi|323651388|gb|ADX97540.1| tyrosyl-tRNA synthetase [Terra1 virus]
          Length = 424

 Score = 49.8 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 48/270 (17%), Positives = 90/270 (33%), Gaps = 29/270 (10%)

Query: 19  HQISNPRELDILCSQ-GVVTAYIGYDLTASSLHAGH-LTQLMLLFWLQKTGHKPISLMGG 76
            +      L  L       TAY G++ +   +H    L  +M    + + G   I  +  
Sbjct: 101 EECDTIDRLKELVESFKNFTAYNGFEPSGR-IHIAQALITVMNTNTIIQNGGSIIIYIAD 159

Query: 77  GTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSS--FIKYGTGKTDALMLNNETWLCS 134
             + +      D        ++I++  +    +F +      GT    A    N+    +
Sbjct: 160 WFAQMNHKMGGD-------LEKIRDVGKYFIEVFKACGINMSGTKFIWASEFFND---NA 209

Query: 135 IKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCR 194
            KY + +  I +  S+ R      +  R +    LS  +  Y  +Q  D  EL  N    
Sbjct: 210 TKYFERMLHIANQTSLARAKRCCQIMGR-REGDELSSSQIIYPCMQVADIFELNPN-GID 267

Query: 195 LQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG--TKMGKTLS-GAIWLNKEM 251
           +   G DQ    +  I+  +R        L+  +L    G   KM K+    AI++    
Sbjct: 268 ICQLGVDQRKVNMLAIEYAKRNNLKTPIILSHHMLMGLKGSKNKMSKSDPENAIFMEDSR 327

Query: 252 TSPYNFWQYWRN------IDDADVVSFAKR 275
               + ++          I D  +  + K 
Sbjct: 328 ---EDIFKKIYKAYCTDEIIDNPIYEYIKY 354


>gi|320100394|ref|YP_004175986.1| tryptophanyl-tRNA synthetase [Desulfurococcus mucosus DSM 2162]
 gi|319752746|gb|ADV64504.1| tryptophanyl-tRNA synthetase [Desulfurococcus mucosus DSM 2162]
          Length = 368

 Score = 49.8 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 46/237 (19%), Positives = 82/237 (34%), Gaps = 37/237 (15%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSF 86
           LD L     V    G+  +    H G       L +LQ  G     ++    + I     
Sbjct: 57  LDALKHGEKVAVLTGFMPSGRP-HLGTAMVYEELRFLQSLGAHVKIVIADAEAYI----V 111

Query: 87  RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL-MLNNETWLCSIKYIDLLREIG 145
           R E R    S  ++  ++ I    +  I     +      ++NE       Y  L++   
Sbjct: 112 RREER----SDVVKRGVDFIAHAIAWGIDPEKAEFYYQTAMDNE-------YYRLIQMFS 160

Query: 146 SFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA-KNYD----CRLQMGGS 200
              S+  M   E++   L   + ++       + QA D + L    Y       + +G  
Sbjct: 161 RKISMAEM---EAIYGELTPGKIVA------SLTQAADILHLQLDKYGGYRHVVVPVGA- 210

Query: 201 DQWGNIICGIDLGERLKT----PKLFALTSPLLTTASGTKMGKTLSG-AIWLNKEMT 252
           DQ  ++    DL +R +      +  ++   LL    G KM K+    AI L+ +  
Sbjct: 211 DQDPHLRLTRDLADRFEQELGLKRPSSIYHKLLRGLDGNKMSKSRPEFAIHLDDDPD 267


>gi|171321584|ref|ZP_02910516.1| tryptophanyl-tRNA synthetase [Burkholderia ambifaria MEX-5]
 gi|171093135|gb|EDT38351.1| tryptophanyl-tRNA synthetase [Burkholderia ambifaria MEX-5]
          Length = 337

 Score = 49.8 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 51/341 (14%), Positives = 107/341 (31%), Gaps = 50/341 (14%)

Query: 45  TASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIE 104
           T   LH GH    +      +       L+    ++       +  RR   ++ + E   
Sbjct: 16  TGP-LHLGHYIGSLRARVQMQHEATQFLLLADTQALTD-----NMGRRQRVTENVIEVAL 69

Query: 105 KIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-L 163
               +           +  ++ +    L  +    LL  +            E +R R  
Sbjct: 70  DYLAVG-----IDPAISTIVVQSQVPELAELSQY-LLNLVTVARLERNPTIKEEIRLRGF 123

Query: 164 KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP---- 219
           +R+    FL   Y + QA D       +   + +G  DQ   I    +L  R        
Sbjct: 124 ERDIPAGFL--TYPVSQAADITAFKATH---VPVG-DDQLPMIEQTNELVRRFNATVDKP 177

Query: 220 -----KLFALTSPLLTTASGT-KMGKTLSGAIWL----NKEMTSPYNFWQ--YWRNIDDA 267
                +        L    G  KM K+L  AI L    ++   +  + +       + D 
Sbjct: 178 VLVECEAVLSAVTRLPGIDGKAKMSKSLGNAITLGSTPDEITQAVKDMYTDPNHLRVSDP 237

Query: 268 DVVSFAKRLTTLP--------MSEIDRMAKLQGKEINEAKKIIATEITTMV------HGR 313
             V      T L         + E+    +  G   +  K+++   +  ++         
Sbjct: 238 GQVEGNVVFTFLDAFEPDVAKVDELKAHYRRGGLGDSVVKRVLNERLQALIEPIRARRRE 297

Query: 314 EEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLT 354
            EA+KA   A+     ++H++ +   ++++ + + G+    
Sbjct: 298 FEADKAEVMAI-LKRGTLHAREVAGATLAEVKGAMGLTYFD 337


>gi|156087959|ref|XP_001611386.1| tryptophanyl-tRNA synthetase family protein [Babesia bovis]
 gi|154798640|gb|EDO07818.1| tryptophanyl-tRNA synthetase family protein [Babesia bovis]
          Length = 587

 Score = 49.8 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 43/257 (16%), Positives = 81/257 (31%), Gaps = 27/257 (10%)

Query: 15  RGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG         +L     QG     Y G   +  +LH GHL   +   WLQ+    P+ +
Sbjct: 249 RGLFFSHRGLDQLLDAYEQGVPFFIYTGRGPSTGALHLGHLVPFLFTKWLQEVFQVPVVI 308

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENI--EKIKGIFSSFIKYGTGKTDALMLNNETW 131
           M              +  + +  ++++ +   +  +      I  G       +  N  +
Sbjct: 309 M------------MSDDEKFLFREQLEYDAVRDMARENAKDIISCGFDPDLTFIYRNTDY 356

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQS---LSFLEFNYMILQAYDFVELA 188
           +  +  I L  ++    + N++         +           +E      QAY  +   
Sbjct: 357 IQDLYGIAL--KMQKKTTFNQV--KGIFGFNMSSNIGCIAYPAIEGAAAFCQAYPKIFGQ 412

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFAL---TSPLLTTASGTKMGKT-LSGA 244
           +N    L   G DQ        DL  RL   K  ++     P L   +  KM  +    A
Sbjct: 413 RNDMLCLVPQGIDQDPFFRMTRDLAPRLGYLKPISIHSKFIPSLLGVT-QKMSSSIEGSA 471

Query: 245 IWLNKEMTSPYNFWQYW 261
           I++        +    +
Sbjct: 472 IFVTDTPKMIRDKVHKY 488


>gi|15677325|ref|NP_274480.1| tryptophanyl-tRNA synthetase [Neisseria meningitidis MC58]
 gi|25009448|sp|Q9JYQ9|SYW_NEIMB RecName: Full=Tryptophanyl-tRNA synthetase; AltName:
           Full=Tryptophan--tRNA ligase; Short=TrpRS
 gi|7226711|gb|AAF41828.1| tryptophanyl-tRNA synthetase [Neisseria meningitidis MC58]
 gi|316984617|gb|EFV63582.1| tryptophanyl-tRNA synthetase [Neisseria meningitidis H44/76]
 gi|325140589|gb|EGC63109.1| tryptophanyl-tRNA synthetase [Neisseria meningitidis CU385]
 gi|325199918|gb|ADY95373.1| tryptophanyl-tRNA synthetase [Neisseria meningitidis H44/76]
          Length = 336

 Score = 49.8 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 41/218 (18%), Positives = 62/218 (28%), Gaps = 49/218 (22%)

Query: 174 FNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSP------ 227
           F+Y IL   D +    N +  +   G DQ  ++    D+  R         T P      
Sbjct: 136 FSYPILMTADILMFNAN-EVPV---GRDQIQHVEMARDIAGRFNHRFRELFTLPEVKIDE 191

Query: 228 ---LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWR---------NIDDAD-VVSFAK 274
              LL    G KM K+    I L +                         D   +    K
Sbjct: 192 NVELLVGLDGRKMSKSYGNTIPLWENDKKTQKSVNKIITNMKEPGEPKQPDESPLFEIYK 251

Query: 275 RLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQ 334
             +T   +         G    EAKK++A +I        E  +      E    +    
Sbjct: 252 AFSTPSETVEFTKMLADGLAWGEAKKLLAAKINA------ELAEPRERYNEL---TADPS 302

Query: 335 HMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHL 372
            +  I                 ++AG A +  EAR  L
Sbjct: 303 QIEEI-----------------LQAGAAKARKEARELL 323


>gi|296413419|ref|XP_002836411.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295630229|emb|CAZ80602.1| unnamed protein product [Tuber melanosporum]
          Length = 444

 Score = 49.8 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 39/238 (16%), Positives = 77/238 (32%), Gaps = 27/238 (11%)

Query: 15  RGFIHQISNPRELDILCSQGVV-TAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +   +  L  QG     Y G   ++ S+H GH+   M   WLQ+T   P+ +
Sbjct: 84  RGMFFSHRDFERILDLYEQGKQFYIYTGRGPSSESMHLGHMIPFMFTKWLQETFDVPLCI 143

Query: 74  MGGGTSIIGDPS--FRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
           M     +  D    F+      +  + ++      +      I  G       + ++  +
Sbjct: 144 M-----LTDDEKFLFKQN----LTIENVKGFA---RKNAKDIIAMGFDVNKTFIFSDLDY 191

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
           +    Y ++L+ +    + N+  +           + L F         +  F  +  + 
Sbjct: 192 MGGAFYENILK-VARCITTNQSKATFGFNDSDNIGK-LHFTAVQASTAFSTTFPHIFGDD 249

Query: 192 DCRLQMG------GSDQWGNIICGIDL-GERLKTPKL--FALTSPLLTTASGTKMGKT 240
             +++          DQ        D+ G           A   P L   SG+KM  +
Sbjct: 250 PIKVRQIPSLIPCAIDQDPYFRLTRDVAGRLKYQKPALIHAKFFPALGG-SGSKMSAS 306


>gi|172065701|ref|YP_001816413.1| tryptophanyl-tRNA synthetase [Burkholderia ambifaria MC40-6]
 gi|171997943|gb|ACB68860.1| tryptophanyl-tRNA synthetase [Burkholderia ambifaria MC40-6]
          Length = 337

 Score = 49.8 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 51/341 (14%), Positives = 107/341 (31%), Gaps = 50/341 (14%)

Query: 45  TASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIE 104
           T   LH GH    +      +       L+    ++       +  RR   ++ + E   
Sbjct: 16  TGP-LHLGHYIGSLRARVQMQHEATQFLLLADTQALTD-----NMGRRQRVTENVIEVAL 69

Query: 105 KIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-L 163
               +           +  ++ +    L  +    LL  +            E +R R  
Sbjct: 70  DYLAVG-----IDPAISTIVVQSQVPELAELSQY-LLNLVTVARLERNPTIKEEIRLRGF 123

Query: 164 KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP---- 219
           +R+    FL   Y + QA D       +   + +G  DQ   I    +L  R        
Sbjct: 124 ERDIPAGFL--TYPVSQAADITAFKATH---VPVG-DDQLPMIEQTNELVRRFNATVDKP 177

Query: 220 -----KLFALTSPLLTTASGT-KMGKTLSGAIWL----NKEMTSPYNFWQ--YWRNIDDA 267
                +        L    G  KM K+L  AI L    ++   +  + +       + D 
Sbjct: 178 VLVECEAVLSAVTRLPGIDGKAKMSKSLGNAITLGSTPDEITQAVKDMYTDPNHLRVSDP 237

Query: 268 DVVSFAKRLTTLP--------MSEIDRMAKLQGKEINEAKKIIATEITTMV------HGR 313
             V      T L         + E+    +  G   +  K+++   +  ++         
Sbjct: 238 GQVEGNVVFTFLDAFEPDVSKVDELKAHYRRGGLGDSVVKRVLNERLQALIEPIRARRRE 297

Query: 314 EEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLT 354
            EA+KA   A+     ++H++ +   ++++ + + G+    
Sbjct: 298 FEADKAEVMAI-LKRGTLHAREVAGATLAEVKGAMGLTYFD 337


>gi|326526043|dbj|BAJ93198.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 402

 Score = 49.8 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 20/101 (19%), Positives = 37/101 (36%), Gaps = 1/101 (0%)

Query: 15  RGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +  E+  L  +G     Y G   ++ +LH GHL   M   +LQ     P+ +
Sbjct: 67  RGLFFAHRDLNEILDLFEKGDKFYLYTGRGPSSEALHLGHLVPFMFTKYLQDAFKVPLVI 126

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFI 114
                      +   E  + +  +  ++ I     +  +FI
Sbjct: 127 QLTDDEKFLWKNLTVEESKRLARENAKDIIACGFDVERTFI 167


>gi|6324192|ref|NP_014262.1| Nam9p [Saccharomyces cerevisiae S288c]
 gi|1346661|sp|P27929|NAM9_YEAST RecName: Full=37S ribosomal protein NAM9, mitochondrial; AltName:
           Full=Nuclear accommodation of mitochondria protein 9;
           Flags: Precursor
 gi|507139|gb|AAA19439.1| NAM9+ protein [Saccharomyces cerevisiae]
 gi|854500|emb|CAA86888.1| mitochondrial ribosomal protein (putative) [Saccharomyces
           cerevisiae]
 gi|1302082|emb|CAA96019.1| NAM9 [Saccharomyces cerevisiae]
 gi|285814517|tpg|DAA10411.1| TPA: Nam9p [Saccharomyces cerevisiae S288c]
          Length = 486

 Score = 49.8 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 23/108 (21%), Positives = 39/108 (36%), Gaps = 14/108 (12%)

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLT---- 354
           +K  A + T   HG    EK        F   + S      S+   E+     LL     
Sbjct: 44  QKWTAKQETRAYHGEHLTEK---RWQTVFKPKLDSVAQLDASLRGGEIKETPFLLQTFAV 100

Query: 355 -------LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
                   + +A FA+S  +AR+ +    +++N   I +    +K  D
Sbjct: 101 LEKRLDFALFRAMFASSVRQARQFILHGNVRVNGVKIKHPSYTLKPGD 148


>gi|323352538|gb|EGA85037.1| Nam9p [Saccharomyces cerevisiae VL3]
          Length = 486

 Score = 49.8 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 23/108 (21%), Positives = 39/108 (36%), Gaps = 14/108 (12%)

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLT---- 354
           +K  A + T   HG    EK        F   + S      S+   E+     LL     
Sbjct: 44  QKWTAKQETRAYHGEHLTEK---RWQTVFKPKLDSVAQLDASLRGGEIKETPFLLQTFAV 100

Query: 355 -------LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
                   + +A FA+S  +AR+ +    +++N   I +    +K  D
Sbjct: 101 LEKRLDFALFRAMFASSVRQARQFILHGNVRVNGVKIKHPSYTLKPGD 148


>gi|323303395|gb|EGA57191.1| Nam9p [Saccharomyces cerevisiae FostersB]
          Length = 486

 Score = 49.8 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 23/108 (21%), Positives = 39/108 (36%), Gaps = 14/108 (12%)

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLT---- 354
           +K  A + T   HG    EK        F   + S      S+   E+     LL     
Sbjct: 44  QKWTAKQETRAYHGEHLTEK---RWQTVFKPKLDSVAQLDASLRGGEIKETPFLLQTFAV 100

Query: 355 -------LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
                   + +A FA+S  +AR+ +    +++N   I +    +K  D
Sbjct: 101 LEKRLDFALFRAMFASSVRQARQFILHGNVRVNGVKIKHPSYTLKPGD 148


>gi|298368649|ref|ZP_06979967.1| tryptophan--tRNA ligase [Neisseria sp. oral taxon 014 str. F0314]
 gi|298282652|gb|EFI24139.1| tryptophan--tRNA ligase [Neisseria sp. oral taxon 014 str. F0314]
          Length = 336

 Score = 49.8 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 42/226 (18%), Positives = 68/226 (30%), Gaps = 49/226 (21%)

Query: 166 EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALT 225
           +  +    ++Y IL   D +    N +  +   G DQ  ++    D+  R         T
Sbjct: 128 DHGVEMGLYSYPILMTADILMFNAN-EVPV---GRDQIQHVEMARDIAGRFNHRFKEVFT 183

Query: 226 SP---------LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWR---------NIDDA 267
            P         LL    G KM K+    I L +                         D 
Sbjct: 184 LPEVKIDENVELLVGLDGRKMSKSYGNTIPLWENDKKTQKSVNKIITNMKEPGEPKQPDE 243

Query: 268 D-VVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMEC 326
             +    K  +T   +        +G    EAKK++A +I         AE A       
Sbjct: 244 SPLFEIYKAFSTPSETAAFTQMLAEGLAWGEAKKLLAAKIN--------AELAEPRER-- 293

Query: 327 FDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHL 372
                            +E++     +  I++AG A +  EAR  L
Sbjct: 294 ----------------YNELTANPSQIEDILQAGAAKARKEARELL 323


>gi|195168165|ref|XP_002024902.1| GL17993 [Drosophila persimilis]
 gi|194108332|gb|EDW30375.1| GL17993 [Drosophila persimilis]
          Length = 525

 Score = 49.8 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 54/316 (17%), Positives = 94/316 (29%), Gaps = 32/316 (10%)

Query: 10  SILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
             L  R    +     +L+ + S+  +  Y G   T    H  +   +  +    K G +
Sbjct: 10  KTLITRNL-QETLGEDKLNKVLSERDLKIYWGTATTGKP-HVAYFVPMSKIADFLKAGCE 67

Query: 70  PISLMGGGTSII---GDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
              L     + +     P    E R     Q I+  +  I       +K+  G       
Sbjct: 68  VTILFADLHAYLDNMKAPWSLLELRTQYYEQVIKAMLSSIGVPLEK-LKFVKGSDYQ--- 123

Query: 127 NNETWLCSIKYIDLLREIGSFFSV-NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
                L     +D+ +          +    E V+   + E  L      Y  LQA D  
Sbjct: 124 -----LSKEYTLDVYKLSSVVTQHDAKKAGAEVVK---QVEYPL-LSGLLYPGLQALDEE 174

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L        Q GG DQ            +L   K     +P++   +G KM  +   + 
Sbjct: 175 YLK----VDAQFGGVDQRKIFTFSEKYLPQLGYEKRIHFMNPMVPGLAGGKMSSSEEDS- 229

Query: 246 WLNKEMTSPYNFWQYWR-------NIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEA 298
                + SP N  +  +       NI D  ++SF K +      E +     +  E    
Sbjct: 230 -KIDLLDSPANVKKKLKKAFCEPGNIADNGLLSFVKHVLFSLFKEGEGFEVCREAEHGGN 288

Query: 299 KKIIATEITTMVHGRE 314
              +  E     +  +
Sbjct: 289 VTFLKYEDLEKYYAED 304


>gi|190409124|gb|EDV12389.1| mitochondrial S4 ribosomal protein [Saccharomyces cerevisiae
           RM11-1a]
 gi|207341770|gb|EDZ69735.1| YNL137Cp-like protein [Saccharomyces cerevisiae AWRI1631]
 gi|259149224|emb|CAY82466.1| Nam9p [Saccharomyces cerevisiae EC1118]
 gi|323307464|gb|EGA60737.1| Nam9p [Saccharomyces cerevisiae FostersO]
 gi|323331931|gb|EGA73343.1| Nam9p [Saccharomyces cerevisiae AWRI796]
 gi|323335936|gb|EGA77214.1| Nam9p [Saccharomyces cerevisiae Vin13]
 gi|323346867|gb|EGA81146.1| Nam9p [Saccharomyces cerevisiae Lalvin QA23]
          Length = 486

 Score = 49.8 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 23/108 (21%), Positives = 39/108 (36%), Gaps = 14/108 (12%)

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLT---- 354
           +K  A + T   HG    EK        F   + S      S+   E+     LL     
Sbjct: 44  QKWTAKQETRAYHGEHLTEK---RWQTVFKPKLDSVAQLDASLRGGEIKETPFLLQTFAV 100

Query: 355 -------LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
                   + +A FA+S  +AR+ +    +++N   I +    +K  D
Sbjct: 101 LEKRLDFALFRAMFASSVRQARQFILHGNVRVNGVKIKHPSYTLKPGD 148


>gi|151944400|gb|EDN62678.1| nuclear accommodation of mitochondria [Saccharomyces cerevisiae
           YJM789]
          Length = 486

 Score = 49.8 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 23/108 (21%), Positives = 39/108 (36%), Gaps = 14/108 (12%)

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLT---- 354
           +K  A + T   HG    EK        F   + S      S+   E+     LL     
Sbjct: 44  QKWTAKQETRAYHGEHLTEK---RWQTVFKPKLDSVAQLDASLRGGEIKETPFLLQTFAV 100

Query: 355 -------LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
                   + +A FA+S  +AR+ +    +++N   I +    +K  D
Sbjct: 101 LEKRLDFALFRAMFASSVRQARQFILHGNVRVNGVKIKHPSYTLKPGD 148


>gi|83952774|ref|ZP_00961504.1| RNA pseudouridylate synthase family protein [Roseovarius
           nubinhibens ISM]
 gi|83835909|gb|EAP75208.1| RNA pseudouridylate synthase family protein [Roseovarius
           nubinhibens ISM]
          Length = 268

 Score = 49.8 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 24/53 (45%), Gaps = 1/53 (1%)

Query: 343 KDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
            +    G  +  +I +AG A S  EA R +++  + +N   I +  L +   D
Sbjct: 2   SETPPPGDRIAKVIARAGLA-SRREAERMVEAGRVTVNGRKIDSPALNVTPSD 53


>gi|333029335|ref|ZP_08457396.1| tryptophanyl-tRNA synthetase [Bacteroides coprosuis DSM 18011]
 gi|332739932|gb|EGJ70414.1| tryptophanyl-tRNA synthetase [Bacteroides coprosuis DSM 18011]
          Length = 329

 Score = 49.8 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 46/304 (15%), Positives = 83/304 (27%), Gaps = 65/304 (21%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSF----RDESRRMMRS 96
           G   T   LH G+    +  F   +  +     +    S+   P      ++    +   
Sbjct: 7   GIRPTGD-LHLGNYFGAVKSFLQMQHEYNCYFFIADWHSLTTHPKPEDIVKNAEGVLAT- 64

Query: 97  QEIQENIEKIKGIFSSFIKYGTGKTDALM---LNNETWLCSIKYIDLLREIGSFFSVNRM 153
                    I    S+       K    +   LN   +L  ++     ++       N  
Sbjct: 65  ----YLACGIDPEVSTIYIQSDVKEVLELYLYLNMNAYLGELERTTTFKDKARKQPNNV- 119

Query: 154 LSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLG 213
                          L      Y  L A D +   ++   ++ +G  DQ  N+       
Sbjct: 120 ------------NAGL----LTYPTLMAADIL---QHKAVKVPVG-KDQEQNMEMARKFA 159

Query: 214 ERLKT-------PKLFALTS----PLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYW 261
            R          P+  + T       +    G+ KMGK+    I+L  +  +     +  
Sbjct: 160 RRFNNIYDTDLFPEPASFTYAKEAIKIPGLDGSGKMGKSEGNCIYLIDDAKT---IRKKV 216

Query: 262 RN-IDDA--------DVVSFAKRLTTLPM-SEIDRMAKLQGKEIN------EAKKIIATE 305
              + DA                 T L + S  D       K  N      + KK +A +
Sbjct: 217 MKAVTDAGPATPNSEKPEVIENLFTFLDIVSSKDTYEYFDEKWNNCSIRYGDLKKQLAED 276

Query: 306 ITTM 309
           I   
Sbjct: 277 IVAF 280


>gi|325066898|ref|ZP_08125571.1| tryptophanyl-tRNA synthetase [Actinomyces oris K20]
          Length = 370

 Score = 49.8 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 46/239 (19%), Positives = 73/239 (30%), Gaps = 34/239 (14%)

Query: 22  SNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL-FWLQKTGHKPISLMGGGTSI 80
           S   E DI  + G    + G   T + +H GH    M     +Q  G +   L+     +
Sbjct: 28  SAEIEADIAVNPGRYRMFTGVRPTGN-MHLGHYFGTMHSWKTIQDAGVETWILVADY-QV 85

Query: 81  IGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDL 140
           I D       R  + S         +    S+          A+   N         +  
Sbjct: 86  ITDRDGVGPIRERVLSLVTDALAVGVDPQRSTIF-----AHSAVPAQN------QLMLPF 134

Query: 141 LREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGS 200
           L  +              + +     +++S L   Y + QA D +    N    L   G 
Sbjct: 135 LSLVTESELHRNPTVKSELEA--TDGRAMSGLMLTYPVHQATDILFCQAN----LVPVGK 188

Query: 201 DQWGNIICGI--------DLGERLKTPKLF----ALTS--PLLTTASGTKMGKTLSGAI 245
           DQ  ++              G  +K   +F    AL S  P+L    G KM K+    I
Sbjct: 189 DQLPHLEQARLIAQRFDKRYGRAVKDHPVFRRPEALLSQAPMLLGLDGEKMSKSRHNTI 247


>gi|296395159|ref|YP_003660043.1| tryptophanyl-tRNA synthetase [Segniliparus rotundus DSM 44985]
 gi|296182306|gb|ADG99212.1| tryptophanyl-tRNA synthetase [Segniliparus rotundus DSM 44985]
          Length = 339

 Score = 49.8 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 56/335 (16%), Positives = 105/335 (31%), Gaps = 53/335 (15%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   T SS+H G+    +   W+Q        L     ++   P     +   +   +++
Sbjct: 9   GIQATGSSIHLGNYLGAIK-QWVQ--------LQQDYEALYFIPDQHSIT-TPIDPAQLR 58

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           EN  +        +  G       +        + +   +L  +  F   +RM  F+   
Sbjct: 59  ENTLRYVAQL---LALGLDPEQCTIFVQSHVPANAQLAWVLSCLTGFGEASRMTQFKD-- 113

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT-- 218
              K+ +  S   F Y  L A D +     Y   L   G DQ  ++    +L ER     
Sbjct: 114 KSDKQGEQTSVGLFTYPCLMAADILA----YQAELVPVGEDQSQHLELTRNLAERFNHRF 169

Query: 219 PKLFALTSPLLTTASG---------TKMGKTLSGAIWLNKEMTSPYNFWQYWRN-IDDAD 268
            + F +    L  A            KM K+ S    + + M  P    + +R+ + D D
Sbjct: 170 GETFVVPKARLVKAGARVYDLREPTKKMSKSASSESGIVQLMDEPKVSAKKFRSAVTDND 229

Query: 269 ---------------VVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGR 313
                          +++    LT     E+ R  K QG      K  +A          
Sbjct: 230 GEVRFDPAQKPGLSNLLAIFAALTGATAEEVAR--KYQGGGYGALKTDLADAFVEFAAPV 287

Query: 314 EE-----AEKAATAAMECFDMSIHSQHMPTISISK 343
            E      +  A       +    ++ +   ++++
Sbjct: 288 RERTLGWLDNRAALHRIVAEGGERAREIAGATLAR 322


>gi|213404004|ref|XP_002172774.1| tryptophanyl-tRNA synthetase [Schizosaccharomyces japonicus yFS275]
 gi|212000821|gb|EEB06481.1| tryptophanyl-tRNA synthetase [Schizosaccharomyces japonicus yFS275]
          Length = 395

 Score = 49.8 bits (118), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 42/244 (17%), Positives = 76/244 (31%), Gaps = 29/244 (11%)

Query: 12  LSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           L  RG +    +    L++   +     Y G   ++SS+H GH+   +   WLQ     P
Sbjct: 58  LLRRGAVFSHRDLDNILNLYEQKKPFYIYTGRGPSSSSMHLGHMVPFVFTKWLQDVFQVP 117

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           + +      +  D  F  +    +  ++ ++     +      I  G       +  N  
Sbjct: 118 VVI-----QLTDDEKFLFK--PKLTLEDCRKFA---RENAKDIIAVGFDPKKTFIFANTD 167

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA-- 188
           +L    Y  +LR I    ++N+  +            ++  + F   I  A  F      
Sbjct: 168 YLGGAFYHTVLR-IARCITLNQ--ARACFG--FSDSDNIGKIHFA-SIQAAPSFSSSFPH 221

Query: 189 -----KNYDCRLQMGGSDQWGNIICGIDL-GERLKTPK--LFALTSPLLTTASGTKMGKT 240
                 N  C +     DQ        D+           L A   P L     TKM  +
Sbjct: 222 IFNGATNVPCLIPC-AIDQDPYFRLTRDVATRLKYKKPSLLHARFFPALQGPQ-TKMSAS 279

Query: 241 LSGA 244
              +
Sbjct: 280 DDNS 283


>gi|326771922|ref|ZP_08231207.1| tryptophan--tRNA ligase [Actinomyces viscosus C505]
 gi|326638055|gb|EGE38956.1| tryptophan--tRNA ligase [Actinomyces viscosus C505]
          Length = 370

 Score = 49.8 bits (118), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 46/239 (19%), Positives = 73/239 (30%), Gaps = 34/239 (14%)

Query: 22  SNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL-FWLQKTGHKPISLMGGGTSI 80
           S   E DI  + G    + G   T + +H GH    M     +Q  G +   L+     +
Sbjct: 28  SAEIEADIAVNPGRYRMFTGVRPTGN-MHLGHYFGTMHSWKTIQDAGVETWILVADY-QV 85

Query: 81  IGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDL 140
           I D       R  + S         +    S+          A+   N         +  
Sbjct: 86  ITDRDGVGPIRERVLSLVTDALAVGVDPQRSTIF-----AHSAVPAQN------QLMLPF 134

Query: 141 LREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGS 200
           L  +              + +     +++S L   Y + QA D +    N    L   G 
Sbjct: 135 LSLVTESELHRNPTVKSELEA--TDGRAMSGLMLTYPVHQATDILFCQAN----LVPVGK 188

Query: 201 DQWGNIICGI--------DLGERLKTPKLF----ALTS--PLLTTASGTKMGKTLSGAI 245
           DQ  ++              G  +K   +F    AL S  P+L    G KM K+    I
Sbjct: 189 DQLPHLEQARLIAQRFDKRYGRAVKDHPVFRRPEALLSQAPMLLGLDGEKMSKSRHNTI 247


>gi|125977094|ref|XP_001352580.1| GA18259 [Drosophila pseudoobscura pseudoobscura]
 gi|54641328|gb|EAL30078.1| GA18259 [Drosophila pseudoobscura pseudoobscura]
          Length = 525

 Score = 49.8 bits (118), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 54/316 (17%), Positives = 94/316 (29%), Gaps = 32/316 (10%)

Query: 10  SILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
             L  R    +     +L+ + S+  +  Y G   T    H  +   +  +    K G +
Sbjct: 10  KTLITRNL-QETLGEDKLNKVLSERDLKIYWGTATTGKP-HVAYFVPMSKIADFLKAGCE 67

Query: 70  PISLMGGGTSII---GDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
              L     + +     P    E R     Q I+  +  I       +K+  G       
Sbjct: 68  VTILFADLHAYLDNMKAPWSLLELRTQYYEQVIKAMLSSIGVPLEK-LKFVKGSDYQ--- 123

Query: 127 NNETWLCSIKYIDLLREIGSFFSV-NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
                L     +D+ +          +    E V+   + E  L      Y  LQA D  
Sbjct: 124 -----LSKEYTLDVYKLSSVVTQHDAKKAGAEVVK---QVEYPL-LSGLLYPGLQALDEE 174

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
            L        Q GG DQ            +L   K     +P++   +G KM  +   + 
Sbjct: 175 YLK----VDAQFGGVDQRKIFTFSEKYLPQLGYEKRIHFMNPMVPGLAGGKMSSSEEDS- 229

Query: 246 WLNKEMTSPYNFWQYWR-------NIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEA 298
                + SP N  +  +       NI D  ++SF K +      E +     +  E    
Sbjct: 230 -KIDLLDSPANVKKKLKKAFCEPGNIADNGLLSFVKHVLFSLFKEGEGFEVCREAEHGGN 288

Query: 299 KKIIATEITTMVHGRE 314
              +  E     +  +
Sbjct: 289 VTFLKYEDLEKYYAED 304


>gi|320096106|ref|ZP_08027706.1| tryptophan--tRNA ligase [Actinomyces sp. oral taxon 178 str. F0338]
 gi|319976986|gb|EFW08729.1| tryptophan--tRNA ligase [Actinomyces sp. oral taxon 178 str. F0338]
          Length = 366

 Score = 49.8 bits (118), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 64/376 (17%), Positives = 114/376 (30%), Gaps = 57/376 (15%)

Query: 26  ELDILCSQGVVTAYI--GYDLTASSLHAGHLTQ-LMLLFWLQKTGHKPISLMGGGTSIIG 82
           E+D+   Q      +  G   T + LH GH    L     LQ  G     L+     +I 
Sbjct: 26  EIDLAIDQDPSRFRVLTGDRPTGN-LHLGHYFGTLRNRALLQDRGVDTWVLIADY-QVIT 83

Query: 83  DPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLR 142
           D       R+ +           I    S+        +    LN          +  L 
Sbjct: 84  DRDGVGPIRQRVLGLIADYLAAGIDPERSTIF----NHSAVPALN-------QLMLPFLS 132

Query: 143 EIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQ 202
            +              + +     ++++ L   Y + QA D +    N    +   G DQ
Sbjct: 133 LVTEAELHRNPTVKAELEA--TEGRAMTGLMLTYPVHQAADILFCKAN----IVPVGQDQ 186

Query: 203 WGNIICGIDL--------------GERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
             ++     +                  + P+      PLL    G KM K+    I L 
Sbjct: 187 LPHLEQARLIAQRFDKRYGRVDPDQPVFRRPEALLSEVPLLLGTDGQKMSKSRGNTIELG 246

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPM--SEIDRMAKLQGKEINEAKKIIATEI 306
                     +  +   DA+     + +T  P+   E+  +  L      EA + IA  I
Sbjct: 247 MSADETARILKKAK--TDAE-----RLITFDPVGRPEVSNLLMLASLSSGEAPEAIAERI 299

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
                     +  A A       S++    P  +   D ++    LL ++  AG   +  
Sbjct: 300 ---------GDAGAGALKALVTESLNEMLAPLRARRADLLANEDHLLAVL-AAGNERANA 349

Query: 367 EARRHLKS--NAIKIN 380
           +A   L     A++++
Sbjct: 350 QADETLAQVRGAMRMD 365


>gi|241164560|ref|XP_002409503.1| tryptophanyl-tRNA synthetase, putative [Ixodes scapularis]
 gi|215494575|gb|EEC04216.1| tryptophanyl-tRNA synthetase, putative [Ixodes scapularis]
          Length = 431

 Score = 49.8 bits (118), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 52/340 (15%), Positives = 102/340 (30%), Gaps = 55/340 (16%)

Query: 25  RELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDP 84
             L+I   +     Y G   ++ +LH GHL   +   WLQ T   P+ +           
Sbjct: 105 EILNIYEQKKPFYLYTGRGPSSDALHVGHLIPFIFTKWLQDTFDVPLVI----------- 153

Query: 85  SFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREI 144
              D+ + + +   ++E  +         +  G    +  +  +  +       +  + I
Sbjct: 154 QLTDDEKFLWKDMTVEEAEKMAHENIRDIVACGFDPANTFIFTDFKYTGQ--CPEFYKNI 211

Query: 145 GSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL--------AKNYDCRLQ 196
                + R ++F  V+       S    +  +  +QA                   C + 
Sbjct: 212 ---VRIRRSVTFNQVKGIFGFGDSDCIGKIGFPAVQAAPSFSSSFPFIFGEQSRVPCLIP 268

Query: 197 MGGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTASGTKMGKTLSG-AIWLN---- 248
            G  DQ        D+  RL  PK   L ++  P L  A  +KM  +    +I+L     
Sbjct: 269 CG-IDQDPYFRMTRDVAPRLGFPKPALLHSVFFPALQGAQ-SKMSASDPNSSIFLTDTPA 326

Query: 249 --KEMTSPYNFWQ----------YWRNIDDADVVSFAKRL--TTLPMSEIDRMAKLQGKE 294
             K   + Y F               N D      + +        + +I +        
Sbjct: 327 QIKNKINKYAFSGGGATVEEHKEKGGNCDVDISYQYLRFFLEDDERLEKIRQDYTSGELL 386

Query: 295 INEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQ 334
               KK +   +   +        A  AA +     + ++
Sbjct: 387 TGFLKKELIEVLQKRI-------AAHQAARKLVTDEVIAK 419


>gi|212550591|ref|YP_002308908.1| tryptophanyl-tRNA synthetase [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
 gi|212548829|dbj|BAG83497.1| tryptophanyl-tRNA synthetase [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
          Length = 330

 Score = 49.8 bits (118), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 55/333 (16%), Positives = 108/333 (32%), Gaps = 71/333 (21%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   T + LH G+    +  F   +  ++    +    S+   P  +             
Sbjct: 7   GVRPTGN-LHLGNYYGAITNFLKMQERNECYFFIADLHSLTTHPDPK------------- 52

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
                ++ I S ++  G     A +         ++   LL  +     + + +SF+  +
Sbjct: 53  MLHTNVRNILSEYLACGIDPEKAAIYMQSDIPEIVQLYLLLNMLAPIAELKKTVSFKD-K 111

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL-------- 212
            R K  ++++   F Y +L A D +    NY   + +G  DQ  ++    +         
Sbjct: 112 IR-KNPENINAGLFTYPVLMAADILIFNANY---VPVG-KDQEQHLELTRNYASRFNHRY 166

Query: 213 -GERLKTPKLFALTSPLLT--TASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWR------ 262
                  P  +     L+     +G+ KMGK+ S  I+L   + +P    +  R      
Sbjct: 167 NVNYFNQPTAYIFDKELIEIPGLNGSGKMGKSESNCIYL---VDNPQIIEKKVRSALTDN 223

Query: 263 -----NIDDAD-VVSFAKRLTTLPMSEIDRMAKLQG-----KEINEAKKIIATEITTMVH 311
                N    D + +    L  +   E+    +        K  +  KK +A +I  +  
Sbjct: 224 GPVGENTPKPDYIENLFTLLRAVSTPEVVSYYENLWIVGATKWYSNLKKQLAEDIIKLTI 283

Query: 312 G-------------------REEAEKAATAAME 325
                               +E AEKA   A +
Sbjct: 284 PIRQRVNDIRNDDTYLRKVTQEGAEKAKETARK 316


>gi|203283935|ref|YP_002221675.1| tryptophanyl-tRNA synthetase [Borrelia duttonii Ly]
 gi|201083378|gb|ACH92969.1| tryptophanyl-tRNA synthetase [Borrelia duttonii Ly]
          Length = 350

 Score = 49.8 bits (118), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 37/226 (16%), Positives = 75/226 (33%), Gaps = 44/226 (19%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
            T  SLH GH    ++     +  ++   ++    +             +    +++   
Sbjct: 13  PTG-SLHLGHYVGSIVNRLKYQEEYETYIIIADLHT-------------LTTQSDLKSIN 58

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL 163
           E    +    + Y +   D   +N           +LL E+    S+  M++      R+
Sbjct: 59  EISINVREIVLDYLSCGIDPERVN---IYLQSAIPELL-ELNLILSMIVMVNR---LQRI 111

Query: 164 KREQSLS----FLE-----FNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
              + +S      E       Y +L + D +    ++   + +G  D   +I    +L  
Sbjct: 112 PSIKDMSINAGLSEIPYGLLGYPVLMSADILMAKADF---VPVG-RDNESHIELTRELAR 167

Query: 215 RLK---------TPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKE 250
           +            P+        L    G TKM K+L  AI+LN +
Sbjct: 168 KFNFLYGENFFPIPEAIFTDFHTLVGIDGKTKMSKSLGNAIFLNDD 213


>gi|42522113|ref|NP_967493.1| tryptophanyl-tRNA synthetase II [Bdellovibrio bacteriovorus HD100]
 gi|39574644|emb|CAE78486.1| Tryptophan--tRNA ligase [Bdellovibrio bacteriovorus HD100]
          Length = 331

 Score = 49.8 bits (118), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 36/227 (15%), Positives = 67/227 (29%), Gaps = 25/227 (11%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
            T   LH GH    +      +  H    ++    ++  +     + R  +    +    
Sbjct: 11  PTGP-LHLGHYVGSLKNRVDLQDSHDQYIIIADVQALTDNYDDTTKVRDNILQVTLDYLA 69

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIG-SFFSVNRMLSFESVRSR 162
             I             K+   + +    L  +     +  +  +    N  +  E  +  
Sbjct: 70  AGI----------DPAKSTIFVQSELPELFEMTTY-FMNLVTVARLERNPTVKTEIQQKN 118

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKN--------YDCRLQMGGSDQWGNIICGIDLGE 214
           L++     FL   Y + QA D +    N             Q     Q  N I   D  +
Sbjct: 119 LEKSLPAGFL--TYPVSQAADILGFKANLVPAGEDQNPMIEQTNEIAQRFNHIYKTDFFK 176

Query: 215 RLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYW 261
            +K     A   P +      KM K+L  AI+L+ +  +     Q  
Sbjct: 177 PVKGMPGVAGRLPGIDGK--AKMSKSLGNAIYLSDDADTIKKKVQKM 221


>gi|167589770|ref|ZP_02382158.1| tryptophanyl-tRNA synthetase II [Burkholderia ubonensis Bu]
          Length = 338

 Score = 49.4 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 41/220 (18%), Positives = 69/220 (31%), Gaps = 29/220 (13%)

Query: 45  TASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIE 104
           T   LH GH    +      +   +   L+    ++       +  R    ++ + E   
Sbjct: 16  TGP-LHLGHYIGSLRARVQLQHEARQFLLLADTQALTD-----NVGRHQKVTENVVEVAL 69

Query: 105 KIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-L 163
               +          K+  ++ +    L  +    LL  +            E +R R  
Sbjct: 70  DYLAVG-----IDPAKSTIVIQSQVPELAELSQY-LLNLVTVARLERNPTIKEEIRLRGF 123

Query: 164 KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP---- 219
           +R+    FL   Y + QA D       +   + +G  DQ   I    +L  R        
Sbjct: 124 ERDIPAGFL--TYPVSQAADITAFKATH---VPVG-DDQLPMIEQTNELVRRFNNTVDRP 177

Query: 220 ---KLFALTSPL--LTTASGT-KMGKTLSGAIWLNKEMTS 253
              +  AL SP+  L    G  KM K+L  AI L      
Sbjct: 178 VLVECEALLSPVTRLPGIDGKAKMSKSLGNAIALGATPDE 217


>gi|154174444|ref|YP_001407732.1| tryptophanyl-tRNA synthetase [Campylobacter curvus 525.92]
 gi|112803611|gb|EAU00955.1| tryptophanyl-tRNA synthetase [Campylobacter curvus 525.92]
          Length = 321

 Score = 49.4 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/111 (18%), Positives = 38/111 (34%), Gaps = 13/111 (11%)

Query: 144 IGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQW 203
           +  +  +  +    S + ++ +    S   F+Y +L A D + L       +   G DQ 
Sbjct: 92  LSQYTPMGLLERAHSYKDKVAKGIGASHGLFSYPVLMAADIL-LYSAQIVPV---GKDQI 147

Query: 204 GNIICGIDLGERLKTPKLFALTSPL---------LTTASGTKMGKTLSGAI 245
            ++    D+  +        LT P          +    G KM K+    I
Sbjct: 148 QHVEIARDIAIKFNNEHGEILTLPTHRVDENVATVPGTDGAKMSKSYGNTI 198


>gi|225023675|ref|ZP_03712867.1| hypothetical protein EIKCOROL_00538 [Eikenella corrodens ATCC
           23834]
 gi|224943557|gb|EEG24766.1| hypothetical protein EIKCOROL_00538 [Eikenella corrodens ATCC
           23834]
          Length = 335

 Score = 49.4 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 41/225 (18%), Positives = 75/225 (33%), Gaps = 39/225 (17%)

Query: 164 KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKL 221
            ++  +    ++Y IL + D + +   ++  +   G DQ  ++    D+ +R      +L
Sbjct: 125 DQDHGVEMGLYSYPILMSADIL-MFNAHEVPV---GRDQIQHVEMTRDIAQRFNHRFKEL 180

Query: 222 FAL-------TSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAK 274
           F L          LL    G KM K+    I L           Q   N          K
Sbjct: 181 FVLPEAKVDDNVELLVGLDGRKMSKSYGNTIPL----FESEKKLQKAVN----------K 226

Query: 275 RLTTLPMSEIDRMAKLQGKEINEAKKIIAT-----EITTMVHGREEAEKAATAAMECFDM 329
            +T L   E           + +  K  AT     E T M+        A   A +    
Sbjct: 227 IITNL--KEPGEPKTPDESPLFDIYKAFATPAETAEFTQML----ADGLAWGEAKKLLGA 280

Query: 330 SIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKS 374
            ++ +  P      +  ++   +  ++ +AG A +  +AR  L  
Sbjct: 281 KLNEELAPKRERFHELTAQPAQIEDIL-QAGAAKARKQARELLDQ 324


>gi|163733415|ref|ZP_02140858.1| RNA pseudouridylate synthase family protein, putative [Roseobacter
           litoralis Och 149]
 gi|161393203|gb|EDQ17529.1| RNA pseudouridylate synthase family protein, putative [Roseobacter
           litoralis Och 149]
          Length = 285

 Score = 49.4 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 29/55 (52%), Gaps = 1/55 (1%)

Query: 341 ISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           ++ +   +G  +  ++ +AG   S  EA R +++  +K+N   IS+  L ++  D
Sbjct: 1   MTSEPTPQGDRIAKVLSRAG-VASRREAERMIEAGRVKVNGQHISSPALNVQGTD 54


>gi|78223167|ref|YP_384914.1| tryptophanyl-tRNA synthetase [Geobacter metallireducens GS-15]
 gi|78194422|gb|ABB32189.1| tryptophanyl-tRNA synthetase [Geobacter metallireducens GS-15]
          Length = 328

 Score = 49.4 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 36/222 (16%), Positives = 68/222 (30%), Gaps = 34/222 (15%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   T   LH GH   ++  +   +  ++         S+           R    + I 
Sbjct: 9   GMRPTGK-LHLGHFHGVLANWRELQEEYECFFFAADWHSLTT-EYDNTAGIRQNTDEMIL 66

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           + +            +G      ++         +     L  I S  +    L      
Sbjct: 67  DWLA-----------FGVDPAKCVIFRQS----RVPQHAELNLILSMITPVSWLERNPTY 111

Query: 161 SRLKRE---QSLSFLEFN-YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL 216
             ++     + LS   F  Y +L A D + + K     +   G DQ  ++    ++  R 
Sbjct: 112 KEMQENLSTKDLSTFGFLGYPVLMASD-IIVYKASKVPV---GHDQLPHLEITREIARRF 167

Query: 217 K--------TPKLFALT-SPLLTTASGTKMGKTLSGAIWLNK 249
                          LT +P +    G KM K+   AI+L++
Sbjct: 168 NYLYNREVFPEPAALLTETPKVLGLDGRKMSKSYGNAIFLSE 209


>gi|317052282|ref|YP_004113398.1| tryptophanyl-tRNA synthetase [Desulfurispirillum indicum S5]
 gi|316947366|gb|ADU66842.1| tryptophanyl-tRNA synthetase [Desulfurispirillum indicum S5]
          Length = 327

 Score = 49.4 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 40/244 (16%), Positives = 65/244 (26%), Gaps = 55/244 (22%)

Query: 41  GYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTS--IIGDPSFRDESRRM---- 93
           G   T   LH G+    L     LQ  G+     +    +     D +       +    
Sbjct: 8   GMRPTGK-LHLGNYFGALQNWVLLQNEGYDCHFFVADWHAITTKHDETGGIRENSIAMVK 66

Query: 94  ------MRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCS-IKYIDLLREIGS 146
                 +   +    ++ +    +             M+    WL     Y +   ++G 
Sbjct: 67  DWLAAGLDPDKSTIFVQSLVKQHAELFTIL------AMITPVGWLERCPTYKEQKEQLGE 120

Query: 147 FFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNI 206
             + N                        Y +LQA D +     YD      G DQ  ++
Sbjct: 121 SKTANYGF-------------------LGYPVLQAADILM----YDPDFVPVGEDQLPHL 157

Query: 207 ICGIDLGERLK-------TPKLFALT-SPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFW 258
               ++  R               LT  P L    G KM K+    I L +        W
Sbjct: 158 EITREIARRFNFLYGETFKEPQAKLTEVPKLPGTDGRKMSKSYGNVIDLCE---GSDELW 214

Query: 259 QYWR 262
           Q  R
Sbjct: 215 QKTR 218


>gi|283780886|ref|YP_003371641.1| tryptophanyl-tRNA synthetase [Pirellula staleyi DSM 6068]
 gi|283439339|gb|ADB17781.1| tryptophanyl-tRNA synthetase [Pirellula staleyi DSM 6068]
          Length = 321

 Score = 49.4 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 34/174 (19%), Positives = 55/174 (31%), Gaps = 32/174 (18%)

Query: 174 FNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK---TPKLFAL------ 224
           F Y +L A D +     YD  +   G DQ  +I    DL          ++F L      
Sbjct: 122 FTYPVLMAADILI----YDADIVPVGHDQIQHIEVCRDLAGSFNFHFKQEVFVLPKSKIL 177

Query: 225 -TSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDAD-------------VV 270
            TS  +    G KM K+ S  I   +         +    I                 + 
Sbjct: 178 ETSAKVPGLDGEKMSKSYSNTI---EIFEPVAAMRKKVMRIKTDLRPMEEPKDPAGDHLF 234

Query: 271 SFAKRL-TTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAA 323
              +   T   ++ +D + +  G    + KK +A E          A++   AA
Sbjct: 235 DLYRLFATADEIAAMDALYRRGGFGYGDVKKALA-EAAERYFAPARAKREELAA 287


>gi|118471756|ref|YP_886034.1| tryptophanyl-tRNA synthetase [Mycobacterium smegmatis str. MC2 155]
 gi|118173043|gb|ABK73939.1| tryptophanyl-tRNA synthetase [Mycobacterium smegmatis str. MC2 155]
          Length = 338

 Score = 49.4 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 47/252 (18%), Positives = 86/252 (34%), Gaps = 32/252 (12%)

Query: 30  LCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG-HKPISLMGGGTSIIGDPSFRD 88
           + S      + G   T+ SLH G+    +   W Q    +     +    + I  P   +
Sbjct: 1   MSSGSKRVVFSGAQPTSDSLHLGNALGAVT-HWAQLQDDYDAFFCVVDLHA-ITVPQDPE 58

Query: 89  ESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFF 148
             RR       Q     I    S+        T + +     W        +L     F 
Sbjct: 59  TLRRRTLVTAAQYLALGIDPARSTVFVQSHVPTHSQLA----W--------VLGCFTGFG 106

Query: 149 SVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIIC 208
             +RM  F+  +S+ +   + +   F Y +L A D + L   +   +   G DQ  ++  
Sbjct: 107 QASRMTQFKD-KSQKQGADATTVGLFTYPVLMAADVL-LYDTHVVPV---GEDQRQHLEL 161

Query: 209 GIDLGERLKT--PKLFALTSPLLTTASGT---------KMGKTLSGAIWLNKEMTSPYNF 257
             DL +R     P  F +  P++  A+           KM K+ +    L   +  P   
Sbjct: 162 ARDLAQRFNARFPDTFVVPEPMIPKATAKIYDLQDPTAKMSKSAATDAGLISLLDDPKAT 221

Query: 258 WQYWRN-IDDAD 268
            +  R+ + D++
Sbjct: 222 AKKIRSAVTDSE 233


>gi|225557549|gb|EEH05835.1| tyrosyl-tRNA synthetase [Ajellomyces capsulatus G186AR]
          Length = 397

 Score = 49.4 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 43/216 (19%), Positives = 65/216 (30%), Gaps = 22/216 (10%)

Query: 29  ILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSII---GDPS 85
           IL     +  Y G   T    H G++  ++ L    + G     L+      +     P 
Sbjct: 31  ILRQNRPLKVYFGTATTGRP-HCGYICPMVKLAHFLRAGCHVKILLADIHGFLDNLKAPI 89

Query: 86  FRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIG 145
                R       I   +E I                         L S   +DL R   
Sbjct: 90  DLVNFRAKYYRYIITALLEAIHVPIDKLEFVLGSDYQ---------LSSRYTMDLFRLSS 140

Query: 146 SFFSV-NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWG 204
                  +    E V+        LS L   Y ++QA D   L    D   Q GG DQ  
Sbjct: 141 VVTEHDAKKAGAEVVKQ--VDNAPLSGL--IYPLMQALDEEHL----DVDAQFGGVDQRK 192

Query: 205 NIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
                ++   R+   +   L SP++   +G KM  +
Sbjct: 193 IFTLAMETLPRVGYKERAHLMSPMVPGLAGGKMSAS 228


>gi|315929260|gb|EFV08476.1| Tryptophan-tRNA ligase [Campylobacter jejuni subsp. jejuni 305]
          Length = 213

 Score = 49.4 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 37/228 (16%), Positives = 66/228 (28%), Gaps = 33/228 (14%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   +   LH G+    +      +   +    +    ++          +  +      
Sbjct: 6   GLQPSGD-LHIGNYFGAIKQMVDAQEKSQMFMFIANYHAMTSSQDGEKLKQNSL-KAAAA 63

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETW-LCSIKYIDLLREIGSFFSVNRMLSFESV 159
                I    S F      K    +     W L     + LL    S+         + V
Sbjct: 64  FLSLGIDPQKSVFWLQSDVKEVMELY----WILSQFTPMGLLERAHSY--------KDKV 111

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
              L     L    F+Y +L A D +     +D R+   G DQ  ++    D+  ++   
Sbjct: 112 AKGLSASHGL----FSYPVLMAADILL----FDTRIVPVGKDQIQHVEIARDIALKVNNE 163

Query: 220 KLFALTSP---------LLTTASGTKMGKTLSGAIWL-NKEMTSPYNF 257
                T P         ++    G KM K+    I + + E T    F
Sbjct: 164 WGEIFTLPEARVNEEVAVVVGTDGAKMSKSYQNTIDIFSSEKTLKNKF 211


>gi|289522960|ref|ZP_06439814.1| tryptophan--tRNA ligase [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
 gi|289503503|gb|EFD24667.1| tryptophan--tRNA ligase [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
          Length = 329

 Score = 49.4 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 39/234 (16%), Positives = 85/234 (36%), Gaps = 33/234 (14%)

Query: 41  GYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           G   T   LH GHL   L     LQ        ++    +++ +          M S +I
Sbjct: 8   GMRPTGK-LHLGHLAGALSNWLKLQDEFECYYCIV-DWHALMSE---------YMNSSKI 56

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           ++   +I   + +    G     A++           + +L   +     + R+      
Sbjct: 57  KDYCREILLDWLAV---GLDPEKAVIFQQSH---VSGHAELHLALSMIAPLGRLERNPIY 110

Query: 160 RSRLKR--EQSLSFLEFN-YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL 216
           + +L+   ++ L    F  Y +L A D + L K     +   G DQ  ++    +L  + 
Sbjct: 111 KEQLENIADKDLQTYGFLGYPVLMAADIL-LYKATKVPV---GEDQSIHLEIAKELARKF 166

Query: 217 KT-------PKLFALT-SPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWR 262
            +            LT +P +    G KM K+ + A+++++++   ++  +   
Sbjct: 167 NSTFKEVFPEPEILLTPTPRVPGIDGRKMSKSYNNALFISEDLNEMWDKVRTMM 220


>gi|116201495|ref|XP_001226559.1| hypothetical protein CHGG_08632 [Chaetomium globosum CBS 148.51]
 gi|88177150|gb|EAQ84618.1| hypothetical protein CHGG_08632 [Chaetomium globosum CBS 148.51]
          Length = 388

 Score = 49.4 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 41/232 (17%), Positives = 75/232 (32%), Gaps = 31/232 (13%)

Query: 18  IHQISNPRELDILCSQGV-VTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGG 76
           + ++ N   +  +  +G     Y G   T    H G+    + +      G     L+  
Sbjct: 17  LAEVLNEEIIKKILDEGQHPKIYWGTATTGRP-HCGYFVPAIKIAQFLAAGCDVTILLAD 75

Query: 77  GTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIF---SSFIKYGTGKTDALMLNNETWLC 133
               +      D  +  +  + +    E  + I       I   T K   ++ ++     
Sbjct: 76  IHGFL------DNLKAPL--ELVMHRAEFYRHIIIATLQAIGVSTEKLRVVLGSSYQ--- 124

Query: 134 SIKYIDLLREIGSFFSV-----NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
             K  + + ++    S+      +    E V+        +S L   Y ILQ  D   L 
Sbjct: 125 --KSPEYVMDVYKMASLISEHDAKKAGAEVVKQ--TDNAPMSGL--LYPILQVLDEQYL- 177

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
              DC  Q GG DQ        D   +L   +   L +P++    G KM  +
Sbjct: 178 ---DCDAQFGGMDQRKLFTAAKDWLPKLGYRERAHLLNPMVPGLHGGKMSSS 226


>gi|325282847|ref|YP_004255388.1| tryptophanyl-tRNA synthetase [Deinococcus proteolyticus MRP]
 gi|324314656|gb|ADY25771.1| tryptophanyl-tRNA synthetase [Deinococcus proteolyticus MRP]
          Length = 347

 Score = 49.4 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 35/221 (15%), Positives = 63/221 (28%), Gaps = 28/221 (12%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
            T   LH GH    +      +T +    L+    ++  +     + R  +    +    
Sbjct: 22  PTGP-LHIGHYAGSLKNRVRLQTEYDTFILIADVQAMTDNFENPQKVRDNVLQVALDYLA 80

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL 163
             +    S+F+        A +      +  +  + +     S    N  +  E  +   
Sbjct: 81  VGLDPQHSTFVVQSMIPEIAELT-----VFYLNLVTV-----SHLRQNPTVKTEIAQKGY 130

Query: 164 KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT----- 218
                  F  F Y + QA D       +   L   G DQ   I    ++  R        
Sbjct: 131 GESVPAGF--FVYPVSQAADITA----FQASLVPVGEDQLPMIEQTREIVRRFNNLYAPV 184

Query: 219 --PKLFAL---TSPLLTTASGT-KMGKTLSGAIWLNKEMTS 253
                  +   T   L    G  KM K+L  A++L      
Sbjct: 185 LVEPQAMVPKGTVARLPGIDGQAKMSKSLGNAVYLGDSADE 225


>gi|299141529|ref|ZP_07034665.1| tryptophan--tRNA ligase [Prevotella oris C735]
 gi|298576865|gb|EFI48735.1| tryptophan--tRNA ligase [Prevotella oris C735]
          Length = 361

 Score = 49.4 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 40/227 (17%), Positives = 64/227 (28%), Gaps = 36/227 (15%)

Query: 44  LTASSLHAGHLTQ-LMLLFWLQKTGH--KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    L     LQ  G   +    M    ++  +    ++ R+ M    + 
Sbjct: 11  PTGK-LHLGHYVGSLRRRVQLQNEGDYDRMFVFMADVQALTDNADNPEKIRQNMIEVALD 69

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNR-MLSFESV 159
                +     +          A +               L  + S   V R       +
Sbjct: 70  YLSAGLDPQLCTLYIQSQIPELAEL------------TTYLMNLVSVSRVQRNPTVKTEI 117

Query: 160 RSR-LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
           + R  +    + F  F Y + QA D           +  G  DQ   I    +L  R   
Sbjct: 118 KMRNFEANIPMGF--FCYPVSQAADIAAFKA---TTIPAG-EDQEPMIELTRELVRRFNQ 171

Query: 219 PKLFALTSP------------LLTTASGTKMGKTLSGAIWLNKEMTS 253
                L  P            L  T    KM K+L   I+L+ +  +
Sbjct: 172 VYSEVLVEPNIMLPENATARRLPGTDGKEKMSKSLGNCIYLSDDADT 218


>gi|323142425|ref|ZP_08077251.1| tryptophan--tRNA ligase [Phascolarctobacterium sp. YIT 12067]
 gi|322413118|gb|EFY04011.1| tryptophan--tRNA ligase [Phascolarctobacterium sp. YIT 12067]
          Length = 363

 Score = 49.4 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 44/301 (14%), Positives = 84/301 (27%), Gaps = 63/301 (20%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGH--KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +     LQ +G   K   ++    ++  +    ++ R+ +    + 
Sbjct: 14  PTGR-LHVGHYVGSLRQRVQLQNSGAYDKVYIMIADAQALTDNAEHPEKVRKNIIEVALD 72

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
                +    S+            +         +  + + R                ++
Sbjct: 73  YLACGLDPAKSTLFIQSMVPQLTELTFYY-----MNLVTVSRL------QRNPTVKNEIK 121

Query: 161 SR-LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQ------------WGNII 207
            R  +      F  F Y I QA D       +   +   G DQ              N +
Sbjct: 122 MRNFEASIPTGF--FCYPISQAADITA----FRATVVPVGEDQLPMLEQCKEIVHKFNSV 175

Query: 208 CGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNI-DD 266
            G  L +             L       KM K+L   I+L+ E   P +  +   ++  D
Sbjct: 176 YGETLVDPDIMLPQNDACLRLPGIDGKAKMSKSLGNCIYLSDE---PEDIKKKVMSMYTD 232

Query: 267 AD--------------VVSFAKRLT-------TLP----MSEIDRMAKLQGKEINEAKKI 301
            D              V ++    +        LP    + E+    +  G    + KK 
Sbjct: 233 PDHVRVEDPGKIEGNTVFTYLDAFSTEEHFAKFLPDYANLDELKAHYQRGGLGDVKVKKF 292

Query: 302 I 302
           +
Sbjct: 293 L 293


>gi|197122576|ref|YP_002134527.1| tryptophanyl-tRNA synthetase [Anaeromyxobacter sp. K]
 gi|196172425|gb|ACG73398.1| tryptophanyl-tRNA synthetase [Anaeromyxobacter sp. K]
          Length = 331

 Score = 49.4 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 40/232 (17%), Positives = 69/232 (29%), Gaps = 33/232 (14%)

Query: 30  LCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT--GHKPISLMGGGTSIIGDPSFR 87
           +      T   G   T   LH GHL     L    K    ++         ++  +    
Sbjct: 1   MSEAKRPTIVSGMRPTGR-LHLGHLHG--ALANWVKLQDDNECFYFSADWHALTTNYHDT 57

Query: 88  DESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSF 147
              R+  R   +      I    S+       K  A +            + ++  +G  
Sbjct: 58  SVIRQAEREMFVDFIAAGIDPARSTLFIQSRVKQHAEL---------NLLLGMITPLGWL 108

Query: 148 FSV-NRMLSFESVRSRLKREQSLSFLEFN-YMILQAYDFVELAKNYDCRLQMGGSDQWGN 205
                     E++  R      L+   F  Y +L   D + L K     +   G DQ  +
Sbjct: 109 ERSPTYKEQRENITDR-----DLALYGFLGYPVLMTAD-IILYKATRVPV---GVDQVPH 159

Query: 206 IICGIDLGERLKT--PKLFALTSPLLT------TASGTKMGKTLSGAIWLNK 249
           +    ++  +      ++F    PLLT         G KM K+    I L +
Sbjct: 160 LELSREIVRKFNFHYGEVFPEPQPLLTAAPKILGTDGRKMSKSYGNTIDLGE 211


>gi|323705457|ref|ZP_08117032.1| tryptophanyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum
           LX-11]
 gi|323535359|gb|EGB25135.1| tryptophanyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum
           LX-11]
          Length = 327

 Score = 49.4 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 48/347 (13%), Positives = 109/347 (31%), Gaps = 69/347 (19%)

Query: 35  VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMM 94
           +   + G   T   +H G+    M  F   +  +  +  +    ++              
Sbjct: 1   MQRVFSGVQPTGD-IHIGNYLGAMKQFVKLQDDYSCLFCIVDLHALT----------VPQ 49

Query: 95  RSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFS-VNRM 153
             + +++   ++ G++ +       K   + + +   +     +  L +  ++F  +NRM
Sbjct: 50  DPETLRKKSIELAGLYLAIG--LDPKKVIIFVQSH--VKEHSELAWLLQCMTYFGELNRM 105

Query: 154 LSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLG 213
                 + + K ++S+S   F Y  L A D +     YD      G+DQ  ++    D+ 
Sbjct: 106 TQ---FKEKSKGKESVSVGLFTYPDLMAADILL----YDTNFVPVGNDQKQHLELTRDIA 158

Query: 214 ERLKT--PKLFALTSPLLTTAS---------GTKMGKTLSGAIWLNKEMTSPYNFWQYWR 262
            R        F +  P++               KM K+          +  P    +   
Sbjct: 159 IRFNNRFGDTFVIPEPMILKTGSRIMSLTEPDKKMSKSSENQYSKINLLDEPSLVKKKIM 218

Query: 263 N-IDDAD-VVSF--------------AKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
             + D++ V+ +                  T + + +++   K QG      KK +   I
Sbjct: 219 KAVTDSENVIRYDPENKPGLSNLLTLYSAFTDISIEDVEARFKGQG--YGTLKKELVDVI 276

Query: 307 TTMVHG-----------------REEAEKAATAAMECFDMSIHSQHM 336
              +                   ++ AEKA+  A    +       +
Sbjct: 277 VERLQEIQSNYRNLDSNFINEVLKDGAEKASEIAKATVNKVKDKMGL 323


>gi|297620435|ref|YP_003708572.1| Tryptophanyl-tRNA synthetase [Waddlia chondrophila WSU 86-1044]
 gi|297375736|gb|ADI37566.1| Tryptophanyl-tRNA synthetase [Waddlia chondrophila WSU 86-1044]
          Length = 348

 Score = 49.4 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 34/226 (15%), Positives = 70/226 (30%), Gaps = 41/226 (18%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPS------FRDESRRMMRSQ 97
            T   LH GH    +      +  +    ++    ++   P        R   R M+   
Sbjct: 13  PTGK-LHLGHYVGSLKNRVALQDKYDCYFIIADLHTLTTKPEKEHIMEMRGNIREMVLDY 71

Query: 98  E---IQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRML 154
               I  +   I    ++   Y       +M++       +  +  L+E+     +    
Sbjct: 72  LACGIDPSKSTIYLQSATSAVYQMNLYFEMMIS----FNRLTGLPSLKEMARNAHI---- 123

Query: 155 SFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
                       +S+ F    Y +LQ  D + + + +   +   G D   +I     +  
Sbjct: 124 ----------DAESIPFGLIGYPVLQTADIL-MPRAHLVPV---GKDNEAHIELSRGIAR 169

Query: 215 RLKT--------PKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEM 251
           +           P++     P L    G  KM K+   AI+L+ + 
Sbjct: 170 KFNQYYGEVFPLPEVLLSDVPTLIGTDGKGKMSKSAGNAIFLSDDP 215


>gi|294785982|ref|ZP_06751269.1| tryptophan--tRNA ligase [Fusobacterium sp. 3_1_27]
 gi|294486319|gb|EFG33682.1| tryptophan--tRNA ligase [Fusobacterium sp. 3_1_27]
          Length = 325

 Score = 49.4 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 31/215 (14%), Positives = 67/215 (31%), Gaps = 31/215 (14%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   +   LH G+    M  F   +  +     +    S+             +   EI 
Sbjct: 7   GIQPSGI-LHIGNYFGAMKQFVDLQDNYDGFYFIADYHSLTS-----------LTKAEIL 54

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           +       +    +     K+   + +N      + ++     + +   V  +    S +
Sbjct: 55  KENTYNIVLDYLAVGLDPNKSTIFLQSNVPEHTELTWL-----LSNITPVGLLERGHSYK 109

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT-- 218
            ++ +    +     Y +L A D +     YD  +   G DQ  ++    D+  +     
Sbjct: 110 DKIAKGIPSNTGLLTYPVLMAADILI----YDTDVVPVGKDQKQHLEMTRDIAMKFNQQY 165

Query: 219 -------PKLFALTSP-LLTTASGTKMGKTLSGAI 245
                  P+ F L    ++    G KM K+ +  I
Sbjct: 166 EVEFFKLPEPFILDDSAIVPGTDGQKMSKSYNNTI 200


>gi|281351780|gb|EFB27364.1| hypothetical protein PANDA_010841 [Ailuropoda melanoleuca]
          Length = 510

 Score = 49.4 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 41/223 (18%), Positives = 67/223 (30%), Gaps = 22/223 (9%)

Query: 19  HQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGT 78
            ++    +L  +  +  +  Y G   T    H  +   +  +    K G +   L     
Sbjct: 1   QEVLGEEKLKEVLKERELKVYWGTATTGKP-HVAYFVPMSKIADFLKAGCEVTILFADLH 59

Query: 79  SII---GDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSI 135
           + +     P    E R       I+  +E I       +K+  G            L   
Sbjct: 60  AYLDNMKAPWELLELRTNYYENVIKAMLESIGVPLEK-LKFVKGTDYQ--------LSKE 110

Query: 136 KYIDLLREIGSFFSV-NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCR 194
             +D+ R          +    E V+   + E  L      Y  LQA D   L       
Sbjct: 111 YTLDVYRLSSVVTQHDAKKAGAEVVK---QVEHPL-LSGLLYPGLQALDEEYLK----VD 162

Query: 195 LQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
            Q GG DQ             L   K   L +P++   +G+KM
Sbjct: 163 AQFGGVDQRKIFTFAEKYLPALGYSKRVHLMNPMVPGLTGSKM 205


>gi|196228074|ref|ZP_03126941.1| tryptophanyl-tRNA synthetase [Chthoniobacter flavus Ellin428]
 gi|196227477|gb|EDY21980.1| tryptophanyl-tRNA synthetase [Chthoniobacter flavus Ellin428]
          Length = 332

 Score = 49.4 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 40/284 (14%), Positives = 90/284 (31%), Gaps = 45/284 (15%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   T    H G+   +M      +   +    +    +             +    +  
Sbjct: 17  GIKPTGKP-HIGNYFGMMRPAIEWQDKGEAFYFIADYHA-------------LTTVFDPV 62

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           +  E  +G+   F+  G     A++           + +L   +     +  + +  + +
Sbjct: 63  KLREYSRGVALDFLACGLDPAKAVLFRQSD---VPAHTELAWLLSCQTPMPMLENAHAYK 119

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT-- 218
             L +E++ S   F Y +L A D +     YD  +   G DQ  ++    DL  ++    
Sbjct: 120 DHLAKEKTPSHGLFAYPVLMAADILI----YDSDVVPVGKDQKQHVEITRDLATKMNGIY 175

Query: 219 ------PKLFAL-TSPLLTTASGTKMGKTLSGAI--WLNKEMTSPYNFWQYWRNIDDAD- 268
                 P+   L T   +    G KM K+    I  +L ++            +    + 
Sbjct: 176 GPIFKVPEASILPTVATIPGLDGQKMSKSYDNTIELFLEEKALKKKIMGIVTDSTPVEEP 235

Query: 269 -------VVSFAKRL---TTLPMSEIDRMAKLQGKEINEAKKII 302
                  +V+  +     T +   +++   +  G    + KK +
Sbjct: 236 KDPATSSIVALYRFFVPETDV--EKMEADFRAGGVGYGDFKKRL 277


>gi|157164791|ref|YP_001466227.1| tryptophanyl-tRNA synthetase [Campylobacter concisus 13826]
 gi|112801539|gb|EAT98883.1| tryptophanyl-tRNA synthetase [Campylobacter concisus 13826]
          Length = 321

 Score = 49.4 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 36/218 (16%), Positives = 65/218 (29%), Gaps = 38/218 (17%)

Query: 41  GYDLTASSLHAGHLTQ-LMLLFWLQKTGHKPISLMG--GGTSIIGDPSFRDESRRMMRSQ 97
           G   +   LH G+    +  +  +Q+     + +      TS+    + +  +       
Sbjct: 6   GLQPSGK-LHLGNYFASIKQMVDMQEQNEMFMFIANYHAMTSLSEAKALKQNT----FDA 60

Query: 98  EIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW-LCSIKYIDLLREIGSFFSVNRMLSF 156
                   I    S F      K    +     W L     + LL    S+         
Sbjct: 61  ACAFLALGIDPNKSIFWVQSDVKEVLELY----WVLSQHTPMGLLERAHSY--------K 108

Query: 157 ESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL 216
           + V   L     L    F+Y +L A D +     Y+ ++   G DQ  ++    D+  + 
Sbjct: 109 DKVAKGLSSHHGL----FSYPVLMAADILL----YNAQVVPVGKDQIQHVEIARDIAIKF 160

Query: 217 KTPKLFALTSP---------LLTTASGTKMGKTLSGAI 245
                   T P          +   +G KM K+    I
Sbjct: 161 NNEHGEIFTLPEAKIDENVATVPGTNGEKMSKSYGNTI 198


>gi|303236216|ref|ZP_07322813.1| tryptophan--tRNA ligase [Prevotella disiens FB035-09AN]
 gi|302483589|gb|EFL46587.1| tryptophan--tRNA ligase [Prevotella disiens FB035-09AN]
          Length = 361

 Score = 49.4 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 45/301 (14%), Positives = 83/301 (27%), Gaps = 63/301 (20%)

Query: 44  LTASSLHAGHLTQLMLLFW---LQKTGH--KPISLMGGGTSIIGDPSFRDESRRMMRSQE 98
            T   LH GH      L     LQ  G   K    M    ++  +    ++ R+ +    
Sbjct: 11  PTGK-LHLGHYVG--SLRRRVELQNMGDFDKMFVFMADVQALTDNAENPEKIRQNIIEVA 67

Query: 99  IQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNR-MLSFE 157
           +      +     +          A +                  + S   V R      
Sbjct: 68  LDYLAAGLDPQKCTLFIQSQISEIAEL------------TTFFMNLVSVSRVQRNPTVKT 115

Query: 158 SVRSR-LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL 216
            ++ R  +    + F  F Y + QA D           +  G  DQ   +    ++  R 
Sbjct: 116 EIKMRNFEANIPMGF--FAYPVSQAADIAAFKA---TTVPAG-EDQEPMLEVAREIVRRF 169

Query: 217 KTPKLFALTSP------------LLTTASGTKMGKTLSGAIWLNKEMTSPYN----FWQ- 259
            T     L  P            L  T    KM K+L   I+L+ +  + ++     +  
Sbjct: 170 NTIYAPVLVEPNIMLPENVTARRLPGTDGKEKMSKSLGNCIYLSDDADTVWSKVKGMYTD 229

Query: 260 -YWRNIDD------ADVVSFAKRLT-----------TLPMSEIDRMAKLQGKEINEAKKI 301
               N+ D        V ++    +              + E+       G    + KK+
Sbjct: 230 PTHLNVSDPGHVEGNAVFTYLDAFSTDQDFADFWSEFANLDELKAAYTAGGIGDMKCKKL 289

Query: 302 I 302
           +
Sbjct: 290 L 290


>gi|281425343|ref|ZP_06256256.1| tryptophan--tRNA ligase [Prevotella oris F0302]
 gi|281400506|gb|EFB31337.1| tryptophan--tRNA ligase [Prevotella oris F0302]
          Length = 361

 Score = 49.4 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 40/227 (17%), Positives = 64/227 (28%), Gaps = 36/227 (15%)

Query: 44  LTASSLHAGHLTQ-LMLLFWLQKTGH--KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    L     LQ  G   +    M    ++  +    ++ R+ M    + 
Sbjct: 11  PTGK-LHLGHYVGSLRRRVQLQNEGDYDRMFVFMADVQALTDNADNPEKIRQNMIEVALD 69

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNR-MLSFESV 159
                +     +          A +               L  + S   V R       +
Sbjct: 70  YLSAGLDPQLCTLYIQSQIPELAEL------------TTYLMNLVSVSRVQRNPTVKTEI 117

Query: 160 RSR-LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
           + R  +    + F  F Y + QA D           +  G  DQ   I    +L  R   
Sbjct: 118 KMRNFEANIPMGF--FCYPVSQAADIAAFKA---TTIPAG-EDQEPMIELTRELVRRFNQ 171

Query: 219 PKLFALTSP------------LLTTASGTKMGKTLSGAIWLNKEMTS 253
                L  P            L  T    KM K+L   I+L+ +  +
Sbjct: 172 VYSEVLVEPNIMLPENATARRLPGTDGKEKMSKSLGNCIYLSDDADT 218


>gi|317154176|ref|YP_004122224.1| tryptophanyl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2]
 gi|316944427|gb|ADU63478.1| tryptophanyl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2]
          Length = 327

 Score = 49.4 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 44/288 (15%), Positives = 87/288 (30%), Gaps = 47/288 (16%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   T   LH GH   ++  +   +  +     +    ++  + +     +  +      
Sbjct: 10  GMRPTGP-LHLGHYFGVIANWLKLQEEYDCYFFVADWHALTSEYADARRVKGFIPGLVKD 68

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
                +        +    K  A +     +L     +  L    +F  +N  L      
Sbjct: 69  WIAAGLDPDKCVIFQQSMIKEHAEL---YLYLSMYTPLGWLERCPTFKEMNAEL------ 119

Query: 161 SRLKREQSLSFLEFN-YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT- 218
                ++ L+   F  Y +L A D +       C + +G  DQ  ++    ++  R    
Sbjct: 120 ----SQKDLNTHGFLGYPVLMAADILMYKP---CAVPVG-RDQLPHLELTREIARRFNHL 171

Query: 219 -------PKLFALTSPL-LTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNI------ 264
                       LT    L    G KM K+   +I L++ +          R +      
Sbjct: 172 TGSEALPEPADLLTEEAKLPGLDGRKMSKSYGNSIMLSEPI---EEIAPKVRGMKTDERR 228

Query: 265 ------DDADVVS---FAKRLTT-LPMSEIDRMAKLQGKEINEAKKII 302
                  D DV +   + K LT    + EI    +       + KK++
Sbjct: 229 QRKSDPGDPDVCNLYPYHKLLTDPARLPEICEGCRSATWGCVDCKKVL 276


>gi|115474797|ref|NP_001060995.1| Os08g0150800 [Oryza sativa Japonica Group]
 gi|37573038|dbj|BAC98550.1| putative tyrosyl-tRNA synthetase [Oryza sativa Japonica Group]
 gi|113622964|dbj|BAF22909.1| Os08g0150800 [Oryza sativa Japonica Group]
 gi|222639916|gb|EEE68048.1| hypothetical protein OsJ_26046 [Oryza sativa Japonica Group]
          Length = 394

 Score = 49.4 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 39/232 (16%), Positives = 80/232 (34%), Gaps = 21/232 (9%)

Query: 15  RGFIHQISNPRELDILCSQGVVTA-YIGYDLTASSLHA--GHLTQLMLLFWLQKTGHKPI 71
           RG   +     EL  L  +  V   Y G++ +   +H   G + + + +  + + G K  
Sbjct: 46  RGIGEECIQEDELMNLLQKKPVPICYDGFEPSGR-MHIAQG-IVKTINVNKMVRAGCKVK 103

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
             +    + + +    D  +     + + E            +++     +     NE W
Sbjct: 104 IWIADWFAQLNNKMGGDIKKIQTVGRYMIEIWRAAGMNLD-GVEFLWSSEEINKRANEYW 162

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
                   L+ +I    +V R++    +  R      L+  +  Y  +Q  D   L  + 
Sbjct: 163 P-------LVMDIARKNNVKRIMRCCQIMGR-NDSDELTAAQIFYPCMQCADIFFLKADI 214

Query: 192 DCRLQMGGSDQWGNIICGIDLGER-LKTPKLFALTSPLLTT-ASGT-KMGKT 240
            C+L   G DQ    +   +  +   +  K   L+  +L     G  KM K+
Sbjct: 215 -CQL---GMDQRKVNMLAREYCDDIKRRNKPIILSHHMLPGFKEGQEKMSKS 262


>gi|34764269|ref|ZP_00145114.1| Tryptophanyl-tRNA synthetase [Fusobacterium nucleatum subsp.
           vincentii ATCC 49256]
 gi|237740857|ref|ZP_04571338.1| tryptophanyl-tRNA synthetase [Fusobacterium sp. 4_1_13]
 gi|256846796|ref|ZP_05552251.1| tryptophanyl-tRNA synthetase [Fusobacterium sp. 3_1_36A2]
 gi|27885957|gb|EAA23288.1| Tryptophanyl-tRNA synthetase [Fusobacterium nucleatum subsp.
           vincentii ATCC 49256]
 gi|229431154|gb|EEO41366.1| tryptophanyl-tRNA synthetase [Fusobacterium sp. 4_1_13]
 gi|256717762|gb|EEU31320.1| tryptophanyl-tRNA synthetase [Fusobacterium sp. 3_1_36A2]
          Length = 325

 Score = 49.4 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 31/215 (14%), Positives = 67/215 (31%), Gaps = 31/215 (14%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   +   LH G+    M  F   +  +     +    S+             +   EI 
Sbjct: 7   GIQPSGI-LHIGNYFGAMKQFVDLQDNYDGFYFIADYHSLTS-----------LTKAEIL 54

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           +       +    +     K+   + +N      + ++     + +   V  +    S +
Sbjct: 55  KENTYNIVLDYLAVGLDPNKSTIFLQSNVPEHTELTWL-----LSNITPVGLLERGHSYK 109

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT-- 218
            ++ +    +     Y +L A D +     YD  +   G DQ  ++    D+  +     
Sbjct: 110 DKIAKGIPSNTGLLTYPVLMAADILI----YDTDVVPVGKDQKQHLEMTRDIAMKFNQQY 165

Query: 219 -------PKLFALTSP-LLTTASGTKMGKTLSGAI 245
                  P+ F L    ++    G KM K+ +  I
Sbjct: 166 EVEFFKLPEPFILDDSAIVPGTDGQKMSKSYNNTI 200


>gi|163737477|ref|ZP_02144894.1| Pseudouridine synthase, Rsu [Phaeobacter gallaeciensis BS107]
 gi|161389003|gb|EDQ13355.1| Pseudouridine synthase, Rsu [Phaeobacter gallaeciensis BS107]
          Length = 447

 Score = 49.4 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/65 (20%), Positives = 27/65 (41%), Gaps = 1/65 (1%)

Query: 330 SIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKL 389
           S  +   P  + +  +   G  +  ++ +AG   S  EA R +    + +N  +I +  L
Sbjct: 32  SAKAGKTPADTPATGDGPEGDRIAKVLSRAG-VASRREAERMIAEGRVAVNGKVIDSPAL 90

Query: 390 QIKLQ 394
            + L 
Sbjct: 91  NVVLG 95


>gi|299782727|gb|ADJ40725.1| Tryptophan--tRNA ligase [Lactobacillus fermentum CECT 5716]
          Length = 337

 Score = 49.4 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 37/220 (16%), Positives = 68/220 (30%), Gaps = 30/220 (13%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     +Q++G + P  ++    ++  +    ++ RR +    +  
Sbjct: 12  PTGK-LHIGHYVGSLRERVKMQESGEYDPFIMIADQQALTDNARDPEKIRRSLTEVALDY 70

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
                       +     K+   + +    L  +    L     S    N  +  E  + 
Sbjct: 71  LA----------VXLDPAKSTLFVQSQIPALAELNLYYLNLVTVSRLERNPTVKAEIQQK 120

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKL 221
              R     F  F Y + Q  D      N    L   G DQ   +    ++     +   
Sbjct: 121 NFNRSIPAGF--FTYPVSQTADITAFKAN----LVPVGDDQEPMLEQAREIVRTFNSIYG 174

Query: 222 FALTSP----------LLTTASGT-KMGKTLSGAIWLNKE 250
             L  P           +    G  KM K+L  AI+L+ +
Sbjct: 175 EVLVEPEGVFPPKGQGRIPGLDGNAKMSKSLGNAIYLSDD 214


>gi|302536383|ref|ZP_07288725.1| tryptophanyl-tRNA synthetase [Streptomyces sp. C]
 gi|302445278|gb|EFL17094.1| tryptophanyl-tRNA synthetase [Streptomyces sp. C]
          Length = 337

 Score = 49.4 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 51/299 (17%), Positives = 89/299 (29%), Gaps = 51/299 (17%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTS--IIGDPSFRDESRRMMRSQE 98
           G   T+ S H G+    +  +   +  H    ++    +  +  DP     + R+  +Q 
Sbjct: 11  GIQPTSGSFHLGNYLGAIRQYVALQETHDAFYMVVDLHAITMPQDPKDLRANTRLSAAQL 70

Query: 99  IQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
           +   ++  +                 ++N  T       +   ++  +   VN       
Sbjct: 71  LAAGLDPERCTLFVQSHVPEHAQLGWVMNCITGFGEASRMTQFKDKSAKGGVNSA----- 125

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
                      S   F Y ILQ  D + L +     +   G DQ  +I    DL ER   
Sbjct: 126 -----------SVGLFTYPILQVADIL-LYQANAVPV---GEDQRQHIELTRDLAERFNQ 170

Query: 219 PKLFALTSPLL-------------TTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRN-I 264
              F  T  L                    KM K+ S    L   +  P    +  ++ +
Sbjct: 171 R--FGRTFTLPAAHIVKEVAKIYDLQDPAIKMSKSASSPKGLINLLDEPKVTEKKIKSAV 228

Query: 265 DDAD------------VVSFAKRLTTLPMSEIDRMAKL-QGKEINEAKKIIATEITTMV 310
            D D            V +    L+TL    I  +    +GK     K  +A  +   V
Sbjct: 229 TDTDTVIRFDTENKPGVSNLLTILSTLTGESITALEASYEGKGYGALKTDLAGVMVDFV 287


>gi|227528862|ref|ZP_03958911.1| tryptophan--tRNA ligase [Lactobacillus vaginalis ATCC 49540]
 gi|227351224|gb|EEJ41515.1| tryptophan--tRNA ligase [Lactobacillus vaginalis ATCC 49540]
          Length = 341

 Score = 49.4 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 36/239 (15%), Positives = 74/239 (30%), Gaps = 33/239 (13%)

Query: 30  LCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF-WLQKTG-HKPISLMGGGTSIIGDPSFR 87
           +  +   T   G   T   LH GH    +     LQ TG +    ++    ++  +    
Sbjct: 1   MAEEKTHTILTGDRPTGK-LHIGHYVGSLKNRVRLQNTGDYNTFIMIADQQALTDNARDP 59

Query: 88  DESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIG-S 146
           ++ R+ +    +      I             K    + +    L  +  +  L  +  +
Sbjct: 60  EKIRKSLHEVALDYLAVGI----------DPKKATIFVQSQIPALSELT-MHYLNLVTIA 108

Query: 147 FFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNI 206
               N  +  E  + +        F  F Y + QA D      +    + +G  DQ   +
Sbjct: 109 RLHRNPTVKTEIQQKKFGESVPAGF--FIYPVSQAADITAFKAD---TVPVG-DDQEPML 162

Query: 207 ICGIDLGERLKT-------PKLFALTSPL----LTTASGT-KMGKTLSGAIWLNKEMTS 253
               ++              +   +  P     +    G  KM K+L  AI+L+ +  +
Sbjct: 163 EQTREIVRSFNRIYNEDILVEPQGVFPPKGEGRIPGLDGNAKMSKSLGNAIYLSDDADT 221


>gi|195022033|ref|XP_001985504.1| GH17095 [Drosophila grimshawi]
 gi|193898986|gb|EDV97852.1| GH17095 [Drosophila grimshawi]
          Length = 683

 Score = 49.4 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 35/213 (16%), Positives = 66/213 (30%), Gaps = 34/213 (15%)

Query: 41  GYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           G   T  SLH G+    +     LQK        +          S        M  + I
Sbjct: 81  GIQPTG-SLHLGNYLGAVRKWTHLQKARENVTLCIVDM------HSITMPHNPPMLRENI 133

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
                 +             ++   + +       + +I     + S  ++ R+      
Sbjct: 134 FMMAATLLACG-----VDPAQSTLFVQSGVMEHAELNWI-----LSSLTTMPRLAQLPQF 183

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT- 218
           + + +R + +    + Y +LQA D + L K     +   G+DQ  +I     L     T 
Sbjct: 184 KEKSRRVKDVPLGLYVYPVLQAAD-IMLYKATHVPV---GADQLQHIQLAQHLIRAFNTR 239

Query: 219 -PKLFALTSPLLTTASG----------TKMGKT 240
             ++F   SP++                KM K+
Sbjct: 240 YGEMFPECSPMIEENDASRVLSLREPSKKMSKS 272


>gi|317498154|ref|ZP_07956455.1| tRNA synthetase class I [Lachnospiraceae bacterium 5_1_63FAA]
 gi|291559516|emb|CBL38316.1| tryptophanyl-tRNA synthetase [butyrate-producing bacterium SSC/2]
 gi|316894509|gb|EFV16690.1| tRNA synthetase class I [Lachnospiraceae bacterium 5_1_63FAA]
          Length = 352

 Score = 49.4 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 37/236 (15%), Positives = 74/236 (31%), Gaps = 35/236 (14%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGH--KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +     LQ +G   +   ++    ++  +    ++ R+      I 
Sbjct: 11  PTGR-LHVGHYVGSLKERVRLQNSGKFDEIYIMIADAQALTDNAEHPEKVRQ-----NIM 64

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           +                  K +  + +    L  + +  +     +    N  +  E  +
Sbjct: 65  QVALDYLACG-----LDPEKVNIFIQSMVPELTELSFYYMNLVTVARVQRNPTVKAEIKQ 119

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
              +    + F  F Y I QA D       +   +   G DQ   +    ++  +  +  
Sbjct: 120 KNFEASIPVGF--FTYPISQAADITA----FRATVVPAGEDQMPMVEQCKEIVHKFNSVY 173

Query: 221 LFALTSPL-----------LTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNI 264
              LT P            L    G  KM K+L   I+L+ E   P +  +   ++
Sbjct: 174 GETLTDPQIVLPDNQACLRLPGIDGKAKMSKSLGNCIYLSDE---PQDIKKKVMSM 226


>gi|223041025|ref|ZP_03611283.1| tryptophanyl-tRNA synthetase [Campylobacter rectus RM3267]
 gi|222877697|gb|EEF12820.1| tryptophanyl-tRNA synthetase [Campylobacter rectus RM3267]
          Length = 321

 Score = 49.4 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 36/219 (16%), Positives = 61/219 (27%), Gaps = 40/219 (18%)

Query: 41  GYDLTASSLHAGHL---TQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQ 97
           G   +   LH G+     + M+    Q      I+     TS+      +         +
Sbjct: 6   GLQPSGK-LHLGNYFASIKQMVEAQGQSEMFMFIANYHAMTSVADAGKLKQN-----TYE 59

Query: 98  EIQENIE-KIKGIFSSFIKYGTGKTDALMLNNETW-LCSIKYIDLLREIGSFFSVNRMLS 155
                +   I    + F      K    +     W L     + LL    S+        
Sbjct: 60  AASAFLSLGIDPQKNVFWVQSDVKEVLELY----WILSQYTPMGLLERAHSY-------- 107

Query: 156 FESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER 215
            + V   L     L    F+Y +L A D +     Y  ++   G DQ  ++    D+  +
Sbjct: 108 KDKVAKGLTSHHGL----FSYPVLMAADILL----YGAQVVPVGKDQIQHVEIARDIAIK 159

Query: 216 LKTPKLFALTSP---------LLTTASGTKMGKTLSGAI 245
                      P          +    G KM K+    I
Sbjct: 160 FNNEHGDIFVLPEYKVDENVATVPGTDGAKMSKSYGNTI 198


>gi|305432944|ref|ZP_07402102.1| tryptophan--tRNA ligase [Campylobacter coli JV20]
 gi|304444098|gb|EFM36753.1| tryptophan--tRNA ligase [Campylobacter coli JV20]
          Length = 319

 Score = 49.4 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 34/215 (15%), Positives = 62/215 (28%), Gaps = 32/215 (14%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   +   LH G+    +      +   +    +    ++      +   +  +      
Sbjct: 6   GLQPSGD-LHIGNYFGAIRQMVEAQEKSEMFMFIANYHAMTSSQDGKKLEQNSL-KAAAA 63

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETW-LCSIKYIDLLREIGSFFSVNRMLSFESV 159
                I    S F      K    +     W L     + LL    S+         + V
Sbjct: 64  FLSLGIDPQKSVFWLQSDVKEVMELY----WILSQFTPMGLLERAHSY--------KDKV 111

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
              L     L    F+Y +L A D +     +D +L   G DQ  ++    D+  ++   
Sbjct: 112 AKGLSASHGL----FSYPVLMAADILL----FDTQLVPVGKDQIQHVEIARDIALKVNNE 163

Query: 220 KLFALTSP---------LLTTASGTKMGKTLSGAI 245
                T P         ++    G KM K+    I
Sbjct: 164 WGEIFTLPEAKINEEVAVVVGTDGAKMSKSYQNTI 198


>gi|119963213|ref|YP_947022.1| tryptophanyl-tRNA synthetase [Arthrobacter aurescens TC1]
 gi|119950072|gb|ABM08983.1| tryptophanyl-tRNA synthetase [Arthrobacter aurescens TC1]
          Length = 374

 Score = 49.4 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 59/357 (16%), Positives = 113/357 (31%), Gaps = 67/357 (18%)

Query: 41  GYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSII--GDPSFRDESRRMMRSQ 97
           G   +A SLH G+    L+    +Q   +  +  +    +I    DP+      R+  +Q
Sbjct: 38  GMQPSADSLHLGNYLGALVNWVRMQDE-YDAVYFIPDLHAITVPQDPAELARRTRVTAAQ 96

Query: 98  EIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFE 157
            I   ++  K       +       A +LN             +  +G    + +    +
Sbjct: 97  YIAGGVDVNKCTLFVQSQVPEHAQLAWVLN------------CITGMGEAARMTQF--KD 142

Query: 158 SVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLG---- 213
             + +     S+    F Y ILQA D + L + +   +   G DQ  ++    DL     
Sbjct: 143 KAQKQGSDHASVGL--FTYPILQAADIL-LYQPHGVPV---GEDQRQHVELSRDLANRFN 196

Query: 214 -------------ERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQY 260
                         + ++ K++ L +P        KM K+      L   +  P    + 
Sbjct: 197 SRFGETFQVPEAFIQKESAKIYDLQNPT------AKMSKSAESPAGLINLLDDPKTVAKR 250

Query: 261 WRN-IDDAD------------VVSFAKRLTTLPMSEIDRM-AKLQGKEINEAKKIIATEI 306
            ++ + D +            V +     + +  + +D++ A  QGK     K  +A   
Sbjct: 251 IKSAVTDTETEIRYDRENKPGVSNLLTIYSAISGTPVDKIVADYQGKMYGHLKVDLAE-- 308

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
             +V G          A E          +  +   K        L  +  K GF  
Sbjct: 309 --LVSG--HLAPIRERANELLADPAELDRLLALGADKAREIAAATLADVYSKVGFLP 361


>gi|156543888|ref|XP_001606982.1| PREDICTED: similar to tryptophanyl-tRNA synthetase [Nasonia
           vitripennis]
          Length = 836

 Score = 49.4 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 46/251 (18%), Positives = 80/251 (31%), Gaps = 34/251 (13%)

Query: 15  RGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG +    +   +  L  QG     Y G   ++  +H GHL   M   WLQ+    P+ +
Sbjct: 502 RGIVFSHRDMHTILNLYEQGKPFYLYTGRGPSSDCMHLGHLVPFMFCKWLQEVFDVPLVI 561

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFI--KYGTGKTDALMLNNETW 131
                      + + E    +     ++ I        +FI        T+     N   
Sbjct: 562 QLTDDEKAIWKNLKIEDAIKLSYANAKDIIACGFRKDKTFIFSDLEHIGTNPAFYQN--- 618

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA-------YDF 184
                   ++R I    + N+      V+       S    +  +   QA       + F
Sbjct: 619 --------MIR-IQKCVTFNQ------VKGIFGFGDSDPIAKIGFPPTQAAPALSSTFPF 663

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTASGTKMGKTL 241
           +   K   C +     DQ        D+  +L  PK   + +   P L  +  TKM  + 
Sbjct: 664 IFKNKKVPCLIPC-AIDQDPYFRMTRDVAPKLNHPKPALIHSTFFPALQGSK-TKMSASD 721

Query: 242 SG-AIWLNKEM 251
           +  AI+L    
Sbjct: 722 NNTAIFLTDTP 732


>gi|269792386|ref|YP_003317290.1| tryptophanyl-tRNA synthetase [Thermanaerovibrio acidaminovorans DSM
           6589]
 gi|269100021|gb|ACZ19008.1| tryptophanyl-tRNA synthetase [Thermanaerovibrio acidaminovorans DSM
           6589]
          Length = 329

 Score = 49.4 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 49/296 (16%), Positives = 95/296 (32%), Gaps = 55/296 (18%)

Query: 37  TAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSF----RDESRR 92
             + G   T   LH GH+   +  +   +  H+    +    +++ D +     RD  R 
Sbjct: 4   RVFSGMRPTGK-LHLGHMAGALANWVKLQEDHECYYCVVDWHALMSDYADSSMLRDNCRE 62

Query: 93  -MMRSQEIQENIEKIKGIFSSFIKYGTGKTDA-LMLNNETWLC-SIKYIDLLREIGSFFS 149
            ++    +  + +K      S +K     + A  M+    WL  +  Y D +  +     
Sbjct: 63  ILLDWLAVGLDPDKCTIFVQSHVKEHAELSLALSMVTPLGWLERNPTYKDQILNL----- 117

Query: 150 VNRMLSFESVRSRLKREQSLSFLEFN-YMILQAYDFVELAKNYDCRLQMGGSDQWGNIIC 208
                          + + LS   F  Y +L A D + L K     +   G DQ  ++  
Sbjct: 118 ---------------QNKDLSTYAFLGYPVLMAADIL-LYKATKVPV---GEDQSAHLEL 158

Query: 209 GIDLGERLK--------TPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQY 260
             ++  R           P+    ++P +    G KM K+   ++ +  E    ++  + 
Sbjct: 159 SREIARRFNYYFGEVFPEPQALHTSTPKIPGTDGRKMSKSYGNSLNIADEPAVLWDKLKT 218

Query: 261 WRNID---------DAD---VVSFAKRLT--TLPMSEIDRMAKLQGKEINEAKKII 302
                         D D   V    K        M E+    +  G    + KK +
Sbjct: 219 MMTDPARYRRTDPGDPDKCPVWDLQKFFNHDAAEMEELAHGCRTAGIGCIDCKKKL 274


>gi|116491760|ref|YP_811304.1| tryptophanyl-tRNA synthetase II [Oenococcus oeni PSU-1]
 gi|118587427|ref|ZP_01544852.1| tryptophanyl-tRNA synthetase [Oenococcus oeni ATCC BAA-1163]
 gi|290891396|ref|ZP_06554457.1| hypothetical protein AWRIB429_1847 [Oenococcus oeni AWRIB429]
 gi|116092485|gb|ABJ57639.1| tryptophanyl-tRNA synthetase [Oenococcus oeni PSU-1]
 gi|118432077|gb|EAV38818.1| tryptophanyl-tRNA synthetase [Oenococcus oeni ATCC BAA-1163]
 gi|290479042|gb|EFD87705.1| hypothetical protein AWRIB429_1847 [Oenococcus oeni AWRIB429]
          Length = 341

 Score = 49.4 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 48/312 (15%), Positives = 92/312 (29%), Gaps = 54/312 (17%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSIIGDPSFRDES--RRMMRSQEIQ 100
            T   LH GH    +     +Q +G+    +M   T    D + RD    R  +    + 
Sbjct: 12  PTGK-LHIGHYVGSLKNRVEMQNSGNYDSFVMIADTQAFTD-NARDPEKIRNSLTEVALD 69

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
                +             KT   + +    L  +    +     +    N  +  E  +
Sbjct: 70  YLAVGL----------DPKKTTIFVQSQIKGLFELTEYYMNLVSVARLQRNPTVKAEIQQ 119

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP- 219
                   + F  F Y + QA D + + +         G DQ   I    +L     +  
Sbjct: 120 KGFGESVPVGF--FTYPVSQAAD-ITIFRAQKVP---AGDDQEPMIEQARELVRSFNSAY 173

Query: 220 ------KLFALTSP----LLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDAD 268
                 +   +  P     +    G  KM K+L  AI+L+ +              +DA 
Sbjct: 174 HTDTLVEPEGVFPPNGLGRIPGIDGNAKMSKSLGNAIYLSDD--------------EDAV 219

Query: 269 VVSFAKRLTTLPMSEIDRMAKLQGKEI-------NEAKKIIATEITTMVHGREEAEKAAT 321
                +  T      ++    ++G  +       +  KK +A      +HG     K   
Sbjct: 220 AKKVKQMYTDPKHIRVEDPGHVEGNVVFTYLDIFDPDKKHVADLKDRYMHGGLGDMKLKK 279

Query: 322 AAMECFDMSIHS 333
             ++  +  +  
Sbjct: 280 HLIDVLENELKP 291


>gi|332296071|ref|YP_004437994.1| tryptophanyl-tRNA synthetase [Thermodesulfobium narugense DSM
           14796]
 gi|332179174|gb|AEE14863.1| tryptophanyl-tRNA synthetase [Thermodesulfobium narugense DSM
           14796]
          Length = 329

 Score = 49.0 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 48/297 (16%), Positives = 98/297 (32%), Gaps = 51/297 (17%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   T  SLH GH   ++  + + +  +K    +    ++         + +   S +++
Sbjct: 8   GMRPTG-SLHIGHYLGVLENWKILQENYKCFFGIVDWHAL---------TTKWQDSADLK 57

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDL-LREIGSFFSVNRMLSFESV 159
             IE++             K+  +       L S+    + L  + S  +    L     
Sbjct: 58  AYIEEMLA-EWLSCGIDPKKSTII-------LQSLVPEHVHLHMVLSMLTPVSWLERNPT 109

Query: 160 RSRLKREQSL----SFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER 215
                RE  +    ++    Y +L A D + + K+    +   G DQ  ++    ++  R
Sbjct: 110 VKEQARELGIEEQLTYGHLGYPVLMAADIL-IYKSKKVPV---GIDQVPHLEMTREIARR 165

Query: 216 LK--------TPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDA 267
                      P+      P L    G KM K+ + AI+L  +  S          I D 
Sbjct: 166 FNFHYKEIFPEPEALLAEFPKLLGVDGRKMSKSYNNAIYLKDDEKSVNEKVASM--ITDP 223

Query: 268 D--------------VVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMV 310
           +              V S+   L    + ++    +       + KK +A +I  ++
Sbjct: 224 ERIKKTDPGHPDVCNVFSYYGVLFKSELFQVRERCEKAQIGCVDCKKQLAKKINEIL 280


>gi|124512622|ref|XP_001349444.1| tyrosyl-tRNA synthetase, putative [Plasmodium falciparum 3D7]
 gi|23499213|emb|CAD51293.1| tyrosyl-tRNA synthetase, putative [Plasmodium falciparum 3D7]
          Length = 373

 Score = 49.0 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 43/240 (17%), Positives = 92/240 (38%), Gaps = 28/240 (11%)

Query: 20  QISNPRELD-ILCSQGVVTAYIGYDLTASSLHA--GHLTQLMLLFWLQKTGHKPISLMGG 76
           +   P EL   L  +  +  Y G++ +   +H   G L + +++  L   G   I  +  
Sbjct: 40  ECIQPDELRVKLLLKRKLICYDGFEPSGR-MHIAQG-LLKSIIVNKLTSNGCTFIFWIAD 97

Query: 77  GTSIIGDP-SFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSI 135
             + + +  S   +  + + S  I+        + +  +++     +     NE W    
Sbjct: 98  WFAHLNNKMSGDLKKIKKVGSYFIEVWKSCGMNMEN--VQFLWASEEINKKPNEYW---- 151

Query: 136 KYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRL 195
               L+ +I   F++NRM     +  R + E++    +  Y  +Q  D   L  +  C+L
Sbjct: 152 ---SLVLDISRSFNINRMKRCLKIMGRSEGEENY-CSQILYPCMQCADIFFLNVDI-CQL 206

Query: 196 QMGGSDQWGNIICGIDL--GERLKTPKL---FALTSPLLTTASGTKMGKT-LSGAIWLNK 249
              G DQ    +   +    +++K   +     +   LL      KM K+  + AI+++ 
Sbjct: 207 ---GIDQRKVNMLAREYCDIKKIKKKPVILSHGMLPGLLEGQE--KMSKSDENSAIFMDD 261


>gi|319638314|ref|ZP_07993077.1| tryptophanyl-tRNA synthetase [Neisseria mucosa C102]
 gi|317400587|gb|EFV81245.1| tryptophanyl-tRNA synthetase [Neisseria mucosa C102]
          Length = 336

 Score = 49.0 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 47/333 (14%), Positives = 95/333 (28%), Gaps = 63/333 (18%)

Query: 50  HAGHLTQLM--LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIK 107
           H G+    +   +   Q    +    +     II          +    + I ++ + + 
Sbjct: 17  HLGNYVGAIRPAIRAAQDANTESFLFLADYHGII----------KCHEPEMIHQSTQAVA 66

Query: 108 GIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLS-FESVRSRLKRE 166
             +   +  G                 ++   +L  I +   +NR  +   +V++  +  
Sbjct: 67  ATW---LACGLNPEQTTFYRQSDIPEVMELNWILTCITAKGLMNRAHAYKAAVQANTENG 123

Query: 167 Q-----SLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKL 221
           Q      +    ++Y IL   D + +   ++  +   G DQ  ++    D+  R      
Sbjct: 124 QEDPDHGVEMGLYSYPILMTADIL-MFNAHEVPV---GRDQIQHVEMARDIAGRFNHRFQ 179

Query: 222 FALTSP---------LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWR---------N 263
              T P         LL    G KM K+    I L +                       
Sbjct: 180 ELFTLPEVKIDENVELLVGLDGRKMSKSYGNTIPLWENDKKTQKSVNKIITNMKEPGEPK 239

Query: 264 IDDAD-VVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHG---------- 312
             D   +    K  +T   +        +G    EAKK++  +I   +            
Sbjct: 240 QPDESPLFEIYKAFSTPSETAEFTQMLAEGLAWGEAKKLLGAKINAELAEPRERYNELTA 299

Query: 313 ---------REEAEKAATAAMECFDMSIHSQHM 336
                    +  A+KA   A E  D    +  +
Sbjct: 300 KPSQIEDILQAGAQKARKEARELLDKVRDAVGI 332


>gi|294782997|ref|ZP_06748321.1| tryptophan--tRNA ligase [Fusobacterium sp. 1_1_41FAA]
 gi|294479875|gb|EFG27652.1| tryptophan--tRNA ligase [Fusobacterium sp. 1_1_41FAA]
          Length = 325

 Score = 49.0 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 45/312 (14%), Positives = 90/312 (28%), Gaps = 48/312 (15%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   +   LH G+    M  F   ++ +     +    S+            +   + ++
Sbjct: 7   GIQPSGI-LHIGNYFGAMKQFVDLQSDYDGFYFIADYHSLTS----------LTNPETLR 55

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           EN   I  +    I     K+   + +N      + ++     + +   +  +    S +
Sbjct: 56  ENTYNIV-LDYLAIGLDPSKSTIFLQSNVPEHTELTWL-----LSNITPIGLLERGHSYK 109

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP- 219
            +  +    +     Y IL A D +     YD  L   G DQ  ++    D+  +     
Sbjct: 110 DKTAKGIPANTGLLTYPILMAADILI----YDSDLVPVGKDQKQHLEMTRDIAMKFNQQY 165

Query: 220 --KLFALTSPLLT-------TASGTKMGKTLSGAI--WLNKEMTSPYNFWQYWRNI---- 264
             + F L  PL+           G KM K+ +  I  ++ K+            +     
Sbjct: 166 GVEFFKLPEPLILDDSAIVPGTDGQKMSKSYNNTINMFVTKKKLKEQVMSIVTDSTPLEE 225

Query: 265 ---DDADVVSFAKRLTTLPMS-EIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAA 320
               D ++         +    E+             AK  +   I            AA
Sbjct: 226 PKNPDNNISKLYALFNNIDKQNELKDKFLAGNFGYGHAKTELLNSILEYF-------AAA 278

Query: 321 TAAMECFDMSIH 332
               E  +  I 
Sbjct: 279 KEKREELEKDID 290


>gi|134298996|ref|YP_001112492.1| tryptophanyl-tRNA synthetase [Desulfotomaculum reducens MI-1]
 gi|134051696|gb|ABO49667.1| tryptophanyl-tRNA synthetase [Desulfotomaculum reducens MI-1]
          Length = 330

 Score = 49.0 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 37/230 (16%), Positives = 77/230 (33%), Gaps = 47/230 (20%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTS-IIGDPSFRDESRRMMRSQEI 99
           G   T   LH GH + L     LQ+  +    ++    +   G    ++        + +
Sbjct: 10  GMRPTGR-LHLGHQSVLNNWVRLQEE-YDCFFMVADWHALTTGWEESKEIHSN--TIEMV 65

Query: 100 QENIEK--------IKGIFSSFIKYGTGKTDALMLNNETWLCS-IKYIDLLREIGSFFSV 150
            + +          I    S+ +++        M    +WL     Y D ++++G     
Sbjct: 66  ADWLATGLNPEKCAIFRQ-SAILEHAELHLLFSMTTPLSWLERVPTYKDQIQKLG----- 119

Query: 151 NRMLSFESVRSRLKREQSLSFLEFN-YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICG 209
                        +  + ++   F  Y +L A D + + K     +   G DQ  ++   
Sbjct: 120 -------------EMGKDINTYGFLGYPLLMAADIL-IYKATTVPV---GEDQIPHVELT 162

Query: 210 IDLGERLKT------PKLFALTSP---LLTTASGTKMGKTLSGAIWLNKE 250
            +L  R         P+  A+ +    +L    G KM K+    I++  +
Sbjct: 163 RELARRFNHLFKPVFPEPQAIVNKEVAVLPGVDGAKMSKSYHNYIFIGAD 212


>gi|307191075|gb|EFN74815.1| Tryptophanyl-tRNA synthetase, cytoplasmic [Camponotus floridanus]
          Length = 410

 Score = 49.0 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 60/346 (17%), Positives = 106/346 (30%), Gaps = 70/346 (20%)

Query: 15  RGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +   +  L  QG     Y G   +  ++H GHL   M   WLQ   + P+ +
Sbjct: 72  RGIFFSHRDMHTILNLYEQGKPFYLYTGRGPSTHAMHLGHLIPFMFCKWLQDVFNVPLVV 131

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                      + + E    +     ++ I        +FI          + NN T+  
Sbjct: 132 QLTDDEKAIWKNIKIEDAITLAYANARDIIACGFNPEKTFI----FSNLEHIGNNPTFYQ 187

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA-------YDFVE 186
           ++              + R ++F  V+       S    + ++   QA       + F+ 
Sbjct: 188 NM------------IRIQRCVTFNQVKGIFGFGDSDPIAKISFPPTQAAPAISSSFPFIF 235

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTASGTKMGKTLSG 243
                 C +     DQ        D+  +L  PK   L +   P L  +  TKM  + + 
Sbjct: 236 KDAKVHCLIPC-AIDQDPYFRMTRDVAPKLGFPKPALLHSSFFPALQGSK-TKMSASDNN 293

Query: 244 -AIWLNK-------------------------------EMTSPYNFWQYWRNIDDADVVS 271
            AI+L                                 E+ + Y + +++   DD  +  
Sbjct: 294 TAIFLTDTAKQIKNKVNKHAFSGGQATIEEHRQLGGNCEVDTSYQWLRFFLE-DDERLEQ 352

Query: 272 FAKRLT-------TLPMSEIDRMAKLQGKEINEAKKIIATEITTMV 310
             K  T        L    ID + +L      EAK  I  ++    
Sbjct: 353 IRKDYTSGEILTGELKKELIDILQRLVAAH-QEAKSKITDDVIKQF 397


>gi|332298007|ref|YP_004439929.1| tryptophanyl-tRNA synthetase [Treponema brennaborense DSM 12168]
 gi|332181110|gb|AEE16798.1| tryptophanyl-tRNA synthetase [Treponema brennaborense DSM 12168]
          Length = 356

 Score = 49.0 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 48/327 (14%), Positives = 92/327 (28%), Gaps = 63/327 (19%)

Query: 44  LTASSLHAGHLTQ-LMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN 102
            T   LH GH    L     L K G     L+                 +++   +    
Sbjct: 37  PTGR-LHIGHYFGSLQNRVRLSKLGVPTCVLIADY--------------QVLTDHDAFAE 81

Query: 103 IEKIKGIFSSFIKYG-----TGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFE 157
           I +        I Y       GK   +  ++     +   +  L  + +          E
Sbjct: 82  IAQNTKQL--VIDYLAAGITPGKNTIIYPHSYVPEANQLMLPFLTLVSNAELSRNPTVKE 139

Query: 158 SVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK 217
            +++     +S++   + Y + QA D +         +   G DQ  ++     +  R  
Sbjct: 140 EIQA--AGLKSVNAGMYTYPVHQACDILFCKA----TVVPVGKDQLPHLEMTRTIARRFN 193

Query: 218 TP----------KLFALT-SPLLTTASG-TKMGKTLSGAIWL----------------NK 249
                           L+ +P +    G  KM K+   AI L                + 
Sbjct: 194 EKFSPEKPVFPEPQALLSKTPSILGLDGSQKMSKSRGNAIMLCATEDETAALIKKAKTDS 253

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTM 309
           E T  Y+        + A+++      T      I       G  +   KK +   +   
Sbjct: 254 ERTITYD---PVNRPEVANLLMLISLCTDESPEAIAARIGDGGGGL--LKKTLTESLNEK 308

Query: 310 VHGREEAEKAATAAMECFDMSIHSQHM 336
           +     AE+A   A   +   +    +
Sbjct: 309 L-RPIRAERARLEADPAYIRRVLLDGV 334


>gi|116618935|ref|YP_819306.1| tryptophanyl-tRNA synthetase II [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
 gi|227431379|ref|ZP_03913430.1| tryptophanyl-tRNA synthetase II [Leuconostoc mesenteroides subsp.
           cremoris ATCC 19254]
 gi|116097782|gb|ABJ62933.1| tryptophanyl-tRNA synthetase [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
 gi|227352842|gb|EEJ43017.1| tryptophanyl-tRNA synthetase II [Leuconostoc mesenteroides subsp.
           cremoris ATCC 19254]
          Length = 339

 Score = 49.0 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 35/250 (14%), Positives = 70/250 (28%), Gaps = 47/250 (18%)

Query: 44  LTASSLHAGHLTQLMLLFW-LQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     +Q +G + P  ++    +   +    ++ R+ +    +  
Sbjct: 12  PTGK-LHIGHYIGSLKNRVSMQNSGDYLPFVMIADTQAFTDNARNPEKIRQSLTEVALDY 70

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
               I             KT   + +    L  +     +  +              ++ 
Sbjct: 71  LAVGI----------DPAKTTIFVQSQIKGLFELTEY-FMNLVSVARLQRNPTVKSEIKQ 119

Query: 162 R-LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP- 219
           +         FL   Y + QA D + + +     +   G DQ   +    +L        
Sbjct: 120 KGFDEGIPAGFL--TYPVSQAAD-IAIFRATKVPV---GDDQEPMLEQTRELVRSFNNAY 173

Query: 220 ------KLFALTSPL----LTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDAD 268
                 +   +  P     L    G  KM K+L+  I+L+ +               D  
Sbjct: 174 KSDVLVEPVGVFPPKGQGRLPGLDGNAKMSKSLNNGIFLSDDA--------------DTL 219

Query: 269 VVSFAKRLTT 278
           V       T 
Sbjct: 220 VKKVKSMYTD 229


>gi|291224910|ref|XP_002732445.1| PREDICTED: Tryptophanyl-tRNA synthetase-like [Saccoglossus
           kowalevskii]
          Length = 414

 Score = 49.0 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 57/339 (16%), Positives = 107/339 (31%), Gaps = 49/339 (14%)

Query: 15  RGFIHQISN-PRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +    L+   ++     Y G   ++ ++H GHL   +   +LQ     P+ +
Sbjct: 78  RGIFFSHRDMNSILNDFENKKPFFLYTGRGPSSEAMHLGHLIPFIFTKYLQDAFDVPLVI 137

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                         D+ + + +   +++  E         I  G       + ++  ++ 
Sbjct: 138 -----------QLTDDEKFLWKDLTVEKANEFAYENAKDIIALGFDVNKTFIFSDIDYIG 186

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA--------YDFV 185
           S           +   + + ++F  V+       S S  + ++  +QA         D  
Sbjct: 187 SSTAF-----YQNMIKIQKCVTFNQVKGIFGFNDSDSIGKISFPAIQAAPSFSNSFPDIF 241

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTASGTKMGKTLS 242
               +  C +     DQ        D+  RL  PK   L +   P L  A  TKM  +  
Sbjct: 242 GSRSDIHCLIPC-AIDQDPYFRMTRDVAPRLGYPKPALLHSQFFPALQGAQ-TKMSASDP 299

Query: 243 G-AIWLNKE------MTSPYNFWQYWRNID---------DADVV-SFAKRL--TTLPMSE 283
             +I+L  E        + Y +      ++         D D+   + K        + E
Sbjct: 300 NSSIFLTDEAEDIETKINKYAYSGGGITVEEHRKKGGNCDVDIPFQYLKFFFEDDQKLDE 359

Query: 284 IDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATA 322
           I            E KKI+   +  MV    E   A T 
Sbjct: 360 IKESYNSGKLLTGELKKILIDILKPMVRSHRERRAAITE 398


>gi|254458704|ref|ZP_05072128.1| tryptophanyl-tRNA synthetase [Campylobacterales bacterium GD 1]
 gi|207084470|gb|EDZ61758.1| tryptophanyl-tRNA synthetase [Campylobacterales bacterium GD 1]
          Length = 321

 Score = 49.0 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 30/219 (13%), Positives = 66/219 (30%), Gaps = 30/219 (13%)

Query: 36  VTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMR 95
           +  + G   +   LH G+    +      +   +  + +    +       +  +   M+
Sbjct: 1   MRVFTGIQPSGD-LHIGNYFGSIKQMVDAQKDSETFAFIANYHAQTSVNDGKRLAELTMQ 59

Query: 96  SQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLS 155
                     I    S+F      K    +     W+           + SF  +  +  
Sbjct: 60  CAT-DFLALGIDPNKSTFWVQSDVKEVLELY----WV-----------LSSFTPMGLLER 103

Query: 156 FESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER 215
             S + +  R Q+ +   F+Y +L A D +  + +    +   G DQ  ++    D+  +
Sbjct: 104 AHSYKDKTARGQATNHSLFSYPVLMAADILLFSSD----VVPVGKDQIQHVEIARDIATK 159

Query: 216 LKTPKLFALTSP---------LLTTASGTKMGKTLSGAI 245
                   L  P          +    G KM K+    +
Sbjct: 160 FNNQYGDILVMPEFRVQEDVQTVPGIDGQKMSKSYGNIV 198


>gi|84489462|ref|YP_447694.1| tryptophanyl-tRNA synthetase [Methanosphaera stadtmanae DSM 3091]
 gi|84372781|gb|ABC57051.1| TrpS [Methanosphaera stadtmanae DSM 3091]
          Length = 365

 Score = 49.0 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 48/250 (19%), Positives = 83/250 (33%), Gaps = 33/250 (13%)

Query: 12  LSERGFIHQISNPREL-DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           L  RG I    +  ++ D L +        G   +   +H GH   +  L W Q+     
Sbjct: 39  LMTRGIIFGQRDYNKITDALNNNKPFATMTGMMPSGK-MHIGHKMVVDQLKWYQEKNADI 97

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIE-KIKGIFSSFIKYGTGKTDALMLNNE 129
              +    +       +++SR +  ++ I   I   +     +F  Y   + D       
Sbjct: 98  YVSIADMEAYAARGISKEKSRELALNEYITNYIALGLDVTRDNFHLYLQSEND------- 150

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE-LA 188
                +K +  +  IG   + N+M      RS      S +       +LQ  D +    
Sbjct: 151 ----DVKNLAYI--IGKKVTFNQM------RSIYGFNNSTNIAHIYTPLLQVADILHPQL 198

Query: 189 KNYD----CRLQMGGSDQWGNIICGIDLGERLKTPKLF----ALTSPLLTTASGTKMGKT 240
           K Y       + +G  DQ  +I    DL  +      F    A     +T  +G KM  +
Sbjct: 199 KKYGGPKPVIVPVG-PDQDPHIRLTRDLASKFNEEYGFIEPSATFHRFMTGLTGEKMSSS 257

Query: 241 L-SGAIWLNK 249
               AI+L  
Sbjct: 258 KPKSAIYLTD 267


>gi|317505010|ref|ZP_07962958.1| tryptophan--tRNA ligase [Prevotella salivae DSM 15606]
 gi|315663892|gb|EFV03611.1| tryptophan--tRNA ligase [Prevotella salivae DSM 15606]
          Length = 361

 Score = 49.0 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 40/238 (16%), Positives = 70/238 (29%), Gaps = 39/238 (16%)

Query: 44  LTASSLHAGHLTQ-LMLLFWLQKTGH--KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    L     LQ  G+  +    M    ++  +    ++ R+ +    + 
Sbjct: 11  PTGK-LHLGHYVGSLRRRVQLQNEGNYDRMFVFMADVQALTDNADNPEKIRQNIIEVALD 69

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNR-MLSFESV 159
                +     +          A +               L  + S   V R       +
Sbjct: 70  YLSAGLDPQLCTLYIQSQIPELAEL------------TTYLMNLVSVSRVQRNPTVKTEI 117

Query: 160 RSR-LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
           + R  +    + F  F Y + QA D           +  G  DQ   I    +L  R   
Sbjct: 118 KMRNFEANLPMGF--FCYPVSQAADITAFKA---TTIPAG-EDQEPMIELTRELARRFNQ 171

Query: 219 PKLFALTSP------------LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNI 264
                L  P            L  T    KM K+L   I+L+ +  +    W+  +++
Sbjct: 172 VYSEVLVEPNILLPENATARRLPGTDGKEKMSKSLGNCIYLSDDADT---VWKKVKSM 226


>gi|317509130|ref|ZP_07966756.1| tryptophanyl-tRNA synthetase [Segniliparus rugosus ATCC BAA-974]
 gi|316252566|gb|EFV12010.1| tryptophanyl-tRNA synthetase [Segniliparus rugosus ATCC BAA-974]
          Length = 339

 Score = 49.0 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 52/294 (17%), Positives = 89/294 (30%), Gaps = 44/294 (14%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   T SS+H G+    +  +   +  ++ +  +    S I  P    + R         
Sbjct: 9   GIQATGSSVHLGNYLGAIKQWVELQHDYEALYFIPDLHS-ITTPHDPAQLR--------- 58

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
              E      +  +  G       +        + +   +L  +  F   +RM  F+   
Sbjct: 59  ---ESTLQYIAQLLALGLDPAQCTIFVQSHVPANAQLAWVLSCLTGFGEASRMTQFKD-- 113

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT-- 218
              K+ +  S   F Y  L A D +     Y   L   G DQ  ++    +L ER     
Sbjct: 114 KSDKQGEQTSVGLFTYPCLMAADILA----YQAELVPVGDDQSQHLELTRNLAERFNHRF 169

Query: 219 PKLFALTSPLLTTASG---------TKMGKTLSGAIWLNKEMTSPYNFWQYWRN-IDDAD 268
            + F +    L  A            KM K+ S    +   M  P    + +R+ + D D
Sbjct: 170 GQTFVVPKARLVKAGARVYDLREPTKKMSKSASSDSGIVNFMDDPKTSAKKFRSAVTDMD 229

Query: 269 ------------VVSFAKRLTTLPMSEIDRMA-KLQGKEINEAKKIIATEITTM 309
                       V +       L     + +A K QG      K  +A      
Sbjct: 230 GEVRFDPAAKPGVSNLLAIFAALTGQTAEEVALKYQGGGYGALKVDLADAFVEF 283


>gi|289433022|ref|YP_003462895.1| tryptophanyl-tRNA synthetase [Dehalococcoides sp. GT]
 gi|288946742|gb|ADC74439.1| tryptophanyl-tRNA synthetase [Dehalococcoides sp. GT]
          Length = 323

 Score = 49.0 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 43/294 (14%), Positives = 93/294 (31%), Gaps = 43/294 (14%)

Query: 37  TAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRS 96
             + G   T   LH G+    +  +   +  ++ I  +    +             +   
Sbjct: 3   RVFSGVRPTGR-LHLGNYLGAVKNYVALQDDYECIYCVVDLHA-------------LTTL 48

Query: 97  QEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSF 156
           +E     E I  +    +  G      ++          +  +L    G    ++ +L  
Sbjct: 49  EETATLKENIYEMMLDLLASGLDPKKCILFVQSQ---VPEINELFTLFGMITPLSWLLRV 105

Query: 157 ESVRSRLK-REQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER 215
            + + ++K    ++++    Y +LQA D       Y   +   G DQ  ++    ++  R
Sbjct: 106 PTFKEKVKMHPDNVNYGLVGYPVLQAADI----SLYKADVVPVGVDQLPHLELTREIVRR 161

Query: 216 LKTP-------KLFALT-SPLLTTASGT-KMGKTLSGAI--WLNKEM---------TSPY 255
                          LT  P +    G  KM K+L+  I   L++E          T P 
Sbjct: 162 FNEKFGQTFPEPQARLTNFPTVVGLDGKDKMSKSLNNHIELALSEEETAKKVMSAVTDPA 221

Query: 256 NFWQYWRNIDD-ADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITT 308
             ++      D  +V       +   +++I    +       + K+ +A  I  
Sbjct: 222 RQYKTDPGHPDICNVYKLHNYFSPQAVAQITDDCQNARIGCVQCKRALAEAINA 275


>gi|167574884|ref|ZP_02367758.1| tryptophanyl-tRNA synthetase II [Burkholderia oklahomensis C6786]
          Length = 346

 Score = 49.0 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 44/292 (15%), Positives = 91/292 (31%), Gaps = 43/292 (14%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
            T + LH GH    +      +  H+   L+    ++  +    D+ RR      + E  
Sbjct: 20  PTGA-LHLGHYIGSLKTRIALQDTHRQFILVADTQALTDNAHDPDKVRR-----NVIEVA 73

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR- 162
                +          ++   + +    L  +     L  +            + + +R 
Sbjct: 74  LDYLAVG-----IDPRRSTIAVQSGLPALAELTLF-YLNFVTVARLERNPTIKDEIHARG 127

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT---- 218
             R+    FL   Y + QA D      +    + +G  DQ   I    ++  R+      
Sbjct: 128 FGRDIPAGFL--CYPVAQAADITAFKAD---TVPVG-DDQLPLIEQTNEIVRRINRQAGV 181

Query: 219 ---PKLFAL--TSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYW------RNIDD 266
              P+  AL  T+  L    G TKM K+   AI L+    +  +  +          + D
Sbjct: 182 DVLPEANALIPTTGRLPGVDGKTKMSKSQGNAIPLSSSPDAITDAVKRMYTDPNHLRVSD 241

Query: 267 ------ADVVSFAKRLTTLP--MSEIDRMAKLQGKEINEAKKIIATEITTMV 310
                   V ++       P  +  +    +  G      K+ +  ++  ++
Sbjct: 242 PGTVEGNVVFTYLDAFDDEPGEVERLKAAYRAGGLGDMTLKRRLEDKLQALI 293


>gi|147669793|ref|YP_001214611.1| tryptophanyl-tRNA synthetase [Dehalococcoides sp. BAV1]
 gi|146270741|gb|ABQ17733.1| tryptophanyl-tRNA synthetase [Dehalococcoides sp. BAV1]
          Length = 323

 Score = 49.0 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 43/294 (14%), Positives = 93/294 (31%), Gaps = 43/294 (14%)

Query: 37  TAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRS 96
             + G   T   LH G+    +  +   +  ++ I  +    +             +   
Sbjct: 3   RVFSGVRPTGR-LHLGNYLGAVKNYVALQDDYECIYCVVDLHA-------------LTTL 48

Query: 97  QEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSF 156
           +E     E I  +    +  G      ++          +  +L    G    ++ +L  
Sbjct: 49  EETATLKENIYEMMLDLLASGLDPKKCILFVQSQ---VPEINELFTLFGMITPLSWLLRV 105

Query: 157 ESVRSRLK-REQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER 215
            + + ++K    ++++    Y +LQA D       Y   +   G DQ  ++    ++  R
Sbjct: 106 PTFKEKVKMHPDNVNYGLVGYPVLQAADI----SLYKADVVPVGVDQLPHLELTREIVRR 161

Query: 216 LKTP-------KLFALT-SPLLTTASGT-KMGKTLSGAI--WLNKEM---------TSPY 255
                          LT  P +    G  KM K+L+  I   L++E          T P 
Sbjct: 162 FNEKFGDTFPEPQARLTNFPTVVGLDGKDKMSKSLNNHIELALSEEETAKKVMSAVTDPA 221

Query: 256 NFWQYWRNIDD-ADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITT 308
             ++      D  +V       +   +++I    +       + K+ +A  I  
Sbjct: 222 RQYKTDPGHPDICNVYKLHNYFSPQAVAQITDDCQNARIGCVQCKRALAEAINA 275


>gi|322793691|gb|EFZ17115.1| hypothetical protein SINV_09161 [Solenopsis invicta]
          Length = 523

 Score = 49.0 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 38/233 (16%), Positives = 67/233 (28%), Gaps = 21/233 (9%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R     + + + L  +  +  +  Y G   T    H G+   +  +    +   +  
Sbjct: 11  LITRNLAEWLGDEK-LKNILKERDLRLYWGTATTGKP-HIGYFAPMSKIADFLRASTEVT 68

Query: 72  SLMGGGTSII---GDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
            L     + +     P    E R       I+  ++ I       +K+  G         
Sbjct: 69  ILFADLHAYLDNMKAPWELLELRTQYYEAMIKAMLKSIDVPLDK-LKFVKGTDYQ----- 122

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA 188
              L     +D+ R        +   +   V  ++            Y  LQA D   L 
Sbjct: 123 ---LTKEYTLDVYRLSSLVTEHDAKKAGAEVVKQVANPL---LSGLLYPGLQALDEHHLK 176

Query: 189 KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
                  Q GG DQ             L   K   L +P++   +G KM  + 
Sbjct: 177 ----VDAQFGGVDQRKIFTFSEKYLPMLGYEKHIHLMNPMIPGLAGAKMSSSE 225


>gi|238062591|ref|ZP_04607300.1| tryptophanyl-tRNA synthetase [Micromonospora sp. ATCC 39149]
 gi|237884402|gb|EEP73230.1| tryptophanyl-tRNA synthetase [Micromonospora sp. ATCC 39149]
          Length = 341

 Score = 49.0 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 49/302 (16%), Positives = 93/302 (30%), Gaps = 49/302 (16%)

Query: 37  TAYIGYDLTASSLHAGHLTQLMLLFWLQ--KTGHKPISLMGGGTSIIGDPSFRDESRRMM 94
             + G   TA S H G+      +      +  H     +    +I      +     ++
Sbjct: 9   RVFSGIQPTADSFHLGNYLG--AVRHWVALQDTHDAFYCVVDLHAITAGHDPK-----VL 61

Query: 95  RSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRML 154
           R +      +               ++         W        +L  I  F   +RM 
Sbjct: 62  RQRTRVAAAQLFAVGLDPERSTLFAQSQVPEHPQLAW--------VLGCITGFGEASRMT 113

Query: 155 S-FESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLG 213
              +  + +     S+    F Y ILQA D + L + +   +   G DQ  ++    DL 
Sbjct: 114 QFKDKSQKQGSDRSSVGL--FTYPILQAADIL-LYQAHAVPV---GEDQRQHLELSRDLA 167

Query: 214 ERLKT--PKLFALTSPLLTTASGT---------KMGKTLSGAIWLNKEMTSPYNFWQYWR 262
            R  +   K F + +P +   +           KM K+ S    +   +  P    +  R
Sbjct: 168 HRFNSQFGKTFVVPAPHIVKDTAKITDLQEPTAKMSKSSSSPTGIIDLLDDPARSAKKIR 227

Query: 263 N---------IDDAD----VVSFAKRLTTLPMSEIDR-MAKLQGKEINEAKKIIATEITT 308
           +         + D +    V +     + L    ID  +A   G+   + KK +   +  
Sbjct: 228 SAVTDTGREIVFDTETKPGVSNLLTIYSALTGRGIDDLVAAYAGRGYGDLKKDLGEVVRE 287

Query: 309 MV 310
            V
Sbjct: 288 FV 289


>gi|283955811|ref|ZP_06373302.1| tryptophanyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           1336]
 gi|283792766|gb|EFC31544.1| tryptophanyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           1336]
          Length = 319

 Score = 49.0 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 33/215 (15%), Positives = 62/215 (28%), Gaps = 32/215 (14%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   +   LH G+    +      +  ++    +    ++          +  +      
Sbjct: 6   GLQPSGD-LHIGNYFGAIKQMVDAQEKNQMFMFIANYHAMTSSQDGEKIQQNSL-KAAAA 63

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETW-LCSIKYIDLLREIGSFFSVNRMLSFESV 159
                I    S F      K    +     W L     + LL    S+         + V
Sbjct: 64  FLSLGIDPQKSVFWLQSDVKEVMELY----WILSQFTPMGLLERAHSY--------KDKV 111

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
              L     L    F+Y +L A D +     +D ++   G DQ  ++    D+  ++   
Sbjct: 112 AKGLSASHGL----FSYPVLMAADILL----FDTQIVPVGKDQIQHVEIARDIALKVNNE 163

Query: 220 KLFALTSP---------LLTTASGTKMGKTLSGAI 245
                T P         ++    G KM K+    I
Sbjct: 164 WGEIFTLPEAKVNEEVAVVVGTDGAKMSKSYQNTI 198


>gi|57168527|ref|ZP_00367660.1| tryptophanyl-tRNA synthetase [Campylobacter coli RM2228]
 gi|57020032|gb|EAL56709.1| tryptophanyl-tRNA synthetase [Campylobacter coli RM2228]
          Length = 319

 Score = 49.0 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 34/215 (15%), Positives = 62/215 (28%), Gaps = 32/215 (14%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   +   LH G+    +      +   +    +    ++      +   +  +      
Sbjct: 6   GLQPSGD-LHIGNYFGAIRQMVEAQEKSEMFMFIANYHAMTSSQDGKKLEQNSL-KAAAA 63

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETW-LCSIKYIDLLREIGSFFSVNRMLSFESV 159
                I    S F      K    +     W L     + LL    S+         + V
Sbjct: 64  FLSLGIDPQKSVFWLQSDVKEVMELY----WILSQFTPMGLLERAHSY--------KDKV 111

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
              L     L    F+Y +L A D +     +D +L   G DQ  ++    D+  ++   
Sbjct: 112 AKGLSASHGL----FSYPVLMAADILL----FDTQLVPVGKDQIQHVEIARDIALKVNNE 163

Query: 220 KLFALTSP---------LLTTASGTKMGKTLSGAI 245
                T P         ++    G KM K+    I
Sbjct: 164 WGEIFTLPEAKINEEVAVVVGTDGAKMSKSYQNTI 198


>gi|288800820|ref|ZP_06406277.1| tryptophan--tRNA ligase [Prevotella sp. oral taxon 299 str. F0039]
 gi|288332281|gb|EFC70762.1| tryptophan--tRNA ligase [Prevotella sp. oral taxon 299 str. F0039]
          Length = 329

 Score = 49.0 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 49/304 (16%), Positives = 91/304 (29%), Gaps = 63/304 (20%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRD---ESRRMMRSQ 97
           G   T   LH G+    +  F   +  +  +  +    S+   P   D    +R ++   
Sbjct: 7   GIRPTG-FLHLGNYFGAVKSFIEMQNDYDCMFFIADWHSLTTSPKPEDIQNSARVILA-- 63

Query: 98  EIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFE 157
             +     I    +        K    +         +     + E+G   +        
Sbjct: 64  --EYLACGIDPNKAPIYVQSDVKETLEL------YLYLNMNTYIGELGRVTTFKE----- 110

Query: 158 SVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK 217
             ++R K+  +++   F Y  L A D +   ++   ++ +G  DQ  N+        R  
Sbjct: 111 --KAR-KQPDNVNAGLFTYPTLMAADIL---QHRAVKVPVG-KDQEQNMEMARKCARRFN 163

Query: 218 T---------PKLF-----ALTSPLLTTASGTKMGKTLSGAIWL-NKEMTSPYNFWQYWR 262
                     P+ F     A+  P L  +   KMGK+    I+L + + T      +   
Sbjct: 164 NIYGVDFFPEPQNFYFNAKAVKVPGLDGSG--KMGKSEGNCIYLHDDDKT----ITKKVM 217

Query: 263 N-IDD--------ADVVSFAKRLTTLPMSEIDR-----MAKLQGKEIN--EAKKIIATEI 306
             + D                  T L +            +     I   E KK IA +I
Sbjct: 218 KAVTDSGPTELNSEKPQVIENLFTFLQICSTQDTYDYFNEQWNNATIRYGELKKQIAQDI 277

Query: 307 TTMV 310
              V
Sbjct: 278 CATV 281


>gi|209413701|ref|NP_001126056.1| tyrosyl-tRNA synthetase, cytoplasmic [Pongo abelii]
 gi|75041625|sp|Q5R8T5|SYYC_PONAB RecName: Full=Tyrosyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Tyrosyl--tRNA ligase; Short=TyrRS
 gi|55730203|emb|CAH91825.1| hypothetical protein [Pongo abelii]
          Length = 528

 Score = 49.0 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 42/230 (18%), Positives = 69/230 (30%), Gaps = 23/230 (10%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R    ++    +L  +  +  +  Y G   T    H  +   +  +    K G +  
Sbjct: 13  LITRNL-QEVLGEEKLKEILKERELKIYWGTATTGKP-HVAYFVPMSKIADFLKAGCEVT 70

Query: 72  SLMGGGTSII---GDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
            L     + +     P    E R       I+  +E I       + +  G         
Sbjct: 71  ILFADLHAYLDNMKAPWELLELRVSYYENVIKAMLESIGVPLEK-LTFIKGTDYQ----- 124

Query: 129 ETWLCSIKYIDLLREIGSFFSV-NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
              L     +D+ R         ++    E V+   + E  L      Y  LQA D   L
Sbjct: 125 ---LSKEYTLDVYRLSSVVTQHDSKKAGAEVVK---QVEHPL-LSGLLYPGLQALDEEYL 177

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
                   Q GG DQ             L   K   L +P++   +G+KM
Sbjct: 178 K----VDAQFGGVDQRKIFTFAEKYLPALGYSKRVHLMNPMVPGLTGSKM 223


>gi|332374266|gb|AEE62274.1| unknown [Dendroctonus ponderosae]
          Length = 413

 Score = 49.0 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 55/329 (16%), Positives = 105/329 (31%), Gaps = 48/329 (14%)

Query: 9   LSILSERGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           +  L  RGF     +   +     QG     Y G   ++SS+H GHL    L  WLQ   
Sbjct: 75  VHHLLRRGFFFSHRDMHSILTRYEQGKPFYLYTGRGPSSSSMHLGHLIPFTLCKWLQDVF 134

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           + P+ +              D+ + + +   ++E  +         I  G       +  
Sbjct: 135 NCPLVI-----------QLTDDEKTLWKDLTVEEAYKMALENAKDIIACGFDINKTFIF- 182

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
              +    +  +  R +     + + ++F  V+     + S    +  +  +QA   +  
Sbjct: 183 -SDFTYIGQRPEFYRNM---IRIQKCVTFNQVKGIFGFDDSTVIGKIAFPAVQATPALST 238

Query: 188 A-------KNYDCRLQMGGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTASGTKM 237
           +       K   C +     DQ        D+  R+   K   L +   P L  A  TKM
Sbjct: 239 SFPDIFGTKKIPCLIPC-AIDQDPYFRMTRDVCPRIGFDKPALLHSKFFPALQGAK-TKM 296

Query: 238 GKTLSGA-IWLN------KEMTSPYNF---------WQYWRNIDDADV-VSFAKRL--TT 278
             + + + I++N      K   + + F          +      D D+   + +      
Sbjct: 297 SASEANSTIFMNDTPKQLKNKINKHAFSGGQTTVEEHRKIGGNCDIDISYQYLRFFLHDD 356

Query: 279 LPMSEIDRMAKLQGKEINEAKKIIATEIT 307
             + EI            E KK +   +T
Sbjct: 357 EKLEEIKENYTSGKLLTGELKKFLIDVLT 385


>gi|316940565|gb|ADU74599.1| tryptophanyl-tRNA synthetase [Clostridium thermocellum DSM 1313]
          Length = 341

 Score = 49.0 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 36/208 (17%), Positives = 64/208 (30%), Gaps = 39/208 (18%)

Query: 176 YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-------TPKLFALTS-P 227
           Y  LQA D +     Y       G DQ  ++    ++  R               LT   
Sbjct: 143 YPCLQAADILI----YKAGFVPVGEDQLPHLELTREIARRFNYLFGEVFPEPQAILTKAK 198

Query: 228 LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRN-IDDA--------------DVVSF 272
           +L    G KM K+    I L+    SP    +   + I D                V SF
Sbjct: 199 VLPGTDGRKMSKSYGNTIALS---DSPDTIRKKVSSMITDPARIRKDDPGHPEVCTVFSF 255

Query: 273 AKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAME------- 325
            K      + EI++  +       + KK +A ++    H     EK              
Sbjct: 256 HKVFNENEVPEIEQHCRGGKIGCVQCKKNLADKMVE--HLEPIYEKRQKIVENPSIVKEI 313

Query: 326 CFDMSIHSQHMPTISISKDEVSRGMGLL 353
             D +  ++ +   ++ +   +  +  +
Sbjct: 314 LADGNEKARKVAQKTLEEVRKAMKIDFI 341


>gi|152967912|ref|YP_001363696.1| tryptophanyl-tRNA synthetase [Kineococcus radiotolerans SRS30216]
 gi|151362429|gb|ABS05432.1| tryptophanyl-tRNA synthetase [Kineococcus radiotolerans SRS30216]
          Length = 346

 Score = 49.0 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 52/294 (17%), Positives = 100/294 (34%), Gaps = 47/294 (15%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTS-IIG-DPSFRDESRRMMRSQE 98
           G   T+ SLH G+    +  +   +  H  +  +    +  +G DP+   E  R   +Q 
Sbjct: 20  GMQPTSGSLHLGNYLGALKQWVALQDTHDALYCVVDLHALTVGPDPAALRERTRWTAAQY 79

Query: 99  IQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
           +   +                +  AL + +       +   +L  +  +    RM  F+ 
Sbjct: 80  VAAGV--------------DPERSALFVQSHV-PAHAQLAWVLSCLTGYGEAARMTQFKD 124

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
             +R +   S +   F Y +L A D + L +  +  +   G DQ  ++    +L +R   
Sbjct: 125 KSAR-QGTDSTTVGLFTYPVLMAADIL-LYQAAEVPV---GEDQRQHLELTRNLAQRFNA 179

Query: 219 --PKLFALTSPLLTTAS---------GTKMGKTLSGAIWLNKEMTSPYNFWQYWRN-IDD 266
                F +  P +   +         G KM K+ S    +   M  P    +  R+ + D
Sbjct: 180 RFGDTFTVPEPFIPKETAKIFDLQDPGAKMSKSSSSPNGIVDVMDDPKVTAKKIRSAVTD 239

Query: 267 ------------ADVVSFAKRLTTLPMSEIDRMAKL-QGKEINEAKKIIATEIT 307
                       A V +     + L    I  +     G+   + KK +A  +T
Sbjct: 240 TGREVLFDPVEKAGVSNLLSIHSALSGKPIAELEADFAGRGYGDLKKELAEVVT 293


>gi|257460132|ref|ZP_05625236.1| tryptophanyl-tRNA synthetase [Campylobacter gracilis RM3268]
 gi|257442573|gb|EEV17712.1| tryptophanyl-tRNA synthetase [Campylobacter gracilis RM3268]
          Length = 322

 Score = 49.0 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 31/216 (14%), Positives = 62/216 (28%), Gaps = 33/216 (15%)

Query: 41  GYDLTASSLHAGHLTQ-LMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           G   +   LH G+    +  +   Q  G +    +    ++                +  
Sbjct: 6   GLQPSGK-LHLGNYFASIKQMVDAQNAGEQMFMFIANYHALTSVSDGAKLKSS--TYEAA 62

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETW-LCSIKYIDLLREIGSFFSVNRMLSFES 158
              +        +     +   + L L    W L     + LL    ++         + 
Sbjct: 63  AAFLSLGIDPKKTVFWVQSDVKEVLELY---WILSGYTPMGLLERAHAY--------KDK 111

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
           +    + +  L    F+Y +L A D + L       +   G DQ  ++    D+  +   
Sbjct: 112 IAKGFESKHDL----FSYPVLMAADIL-LYSAEVVPV---GKDQIQHVEIARDIALKFNN 163

Query: 219 PKLFALTSP---------LLTTASGTKMGKTLSGAI 245
                LT P         ++    G KM K+    I
Sbjct: 164 AHGEILTIPQARVNDEVAIVPGTDGAKMSKSYGNTI 199


>gi|78776590|ref|YP_392905.1| tryptophanyl-tRNA synthetase [Sulfurimonas denitrificans DSM 1251]
 gi|78497130|gb|ABB43670.1| tryptophanyl-tRNA synthetase [Sulfurimonas denitrificans DSM 1251]
          Length = 319

 Score = 49.0 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 33/214 (15%), Positives = 64/214 (29%), Gaps = 32/214 (14%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   +   LH G+    +      +   +  + +    ++      +D +R  M+     
Sbjct: 6   GIQPSGD-LHIGNYFGSIKQMVDAQESSQTFAFIANYHAMTS--GGKDLARLTMQCAT-D 61

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
                I    S F      K    +     W+           + SF  +  +    S +
Sbjct: 62  FLALGIDPKKSIFWVQSDVKEVLELY----WI-----------LSSFTPMGLLERAHSYK 106

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            +  +    +   F+Y +L A D +     +   +   G DQ  ++    D+  R     
Sbjct: 107 DKTAKGIGANHSLFSYPVLMAADILI----FGSEVVPVGKDQIQHVEIARDIAIRFNNQY 162

Query: 221 LFALTSP---------LLTTASGTKMGKTLSGAI 245
              LT P          +    G KM K+    I
Sbjct: 163 GDILTIPEFRVQEEVQTVLGTDGQKMSKSYGNII 196


>gi|23465615|ref|NP_696218.1| hemolysin-like protein [Bifidobacterium longum NCC2705]
 gi|23326286|gb|AAN24854.1| hemolysin-like protein with S4 domain found in bacteria and plants
           [Bifidobacterium longum NCC2705]
          Length = 280

 Score = 49.0 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 8/40 (20%), Positives = 20/40 (50%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           +V +G   S  +A+R +K+  ++++   I+     +K   
Sbjct: 42  LVASGLVESRAKAQRLIKAGHVRVDGETITKPSFMVKAGH 81


>gi|323651386|gb|ADX97539.1| tyrosyl-tRNA synthetase [Courdo11 virus]
          Length = 424

 Score = 49.0 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 48/267 (17%), Positives = 88/267 (32%), Gaps = 23/267 (8%)

Query: 19  HQISNPRELDILCSQ-GVVTAYIGYDLTASSLHAGH-LTQLMLLFWLQKTGHKPISLMGG 76
            +      L  L       TAY G++ +   +H    L  +M    + + G   I  +  
Sbjct: 101 EECDTIDRLKELVESFKNFTAYNGFEPSGR-IHIAQALITVMNTNTIIQNGGSMIIYIAD 159

Query: 77  GTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSS--FIKYGTGKTDALMLNNETWLCS 134
             + +      D        ++I++  +    +F +      GT    A    N+    +
Sbjct: 160 WFAQMNHKMGGD-------LEKIKDVGKYFIEVFKACGINMSGTKFIWASEFFND---NA 209

Query: 135 IKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCR 194
            KY + +  I +  S+ R      +  R +    LS  +  Y  +Q  D  EL  N    
Sbjct: 210 TKYFERMLHIANKTSLARAKRCCQIMGR-REGDELSSSQIIYPCMQVADIFELNPN-GID 267

Query: 195 LQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG--TKMGKTLS-GAIWLNKEM 251
           +   G DQ    +  I+  +R        L+  +L    G   KM K+    AI++    
Sbjct: 268 ICQLGVDQRKVNMLAIEYAKRNNLKTPIILSHHMLMGLKGSKNKMSKSDPENAIFMEDSR 327

Query: 252 TSPYNFWQYWRNID---DADVVSFAKR 275
              +         D   D  +  + K 
Sbjct: 328 EDIFKKIHKAYCTDEIIDNPIYEYIKY 354


>gi|125973204|ref|YP_001037114.1| tryptophanyl-tRNA synthetase [Clostridium thermocellum ATCC 27405]
 gi|256003679|ref|ZP_05428667.1| tryptophanyl-tRNA synthetase [Clostridium thermocellum DSM 2360]
 gi|281417403|ref|ZP_06248423.1| tryptophanyl-tRNA synthetase [Clostridium thermocellum JW20]
 gi|125713429|gb|ABN51921.1| tryptophanyl-tRNA synthetase [Clostridium thermocellum ATCC 27405]
 gi|255992240|gb|EEU02334.1| tryptophanyl-tRNA synthetase [Clostridium thermocellum DSM 2360]
 gi|281408805|gb|EFB39063.1| tryptophanyl-tRNA synthetase [Clostridium thermocellum JW20]
          Length = 329

 Score = 49.0 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 36/208 (17%), Positives = 64/208 (30%), Gaps = 39/208 (18%)

Query: 176 YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-------TPKLFALTS-P 227
           Y  LQA D +     Y       G DQ  ++    ++  R               LT   
Sbjct: 131 YPCLQAADILI----YKAGFVPVGEDQLPHLELTREIARRFNYLFGEVFPEPQAILTKAK 186

Query: 228 LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRN-IDDA--------------DVVSF 272
           +L    G KM K+    I L+    SP    +   + I D                V SF
Sbjct: 187 VLPGTDGRKMSKSYGNTIALS---DSPDTIRKKVSSMITDPARIRKDDPGHPEVCTVFSF 243

Query: 273 AKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAME------- 325
            K      + EI++  +       + KK +A ++    H     EK              
Sbjct: 244 HKVFNENEVPEIEQHCRGGKIGCVQCKKNLADKMVE--HLEPIYEKRQKIVENPSIVKEI 301

Query: 326 CFDMSIHSQHMPTISISKDEVSRGMGLL 353
             D +  ++ +   ++ +   +  +  +
Sbjct: 302 LADGNEKARKVAQKTLEEVRKAMKIDFI 329


>gi|260662605|ref|ZP_05863500.1| tryptophanyl-tRNA synthetase [Lactobacillus fermentum 28-3-CHN]
 gi|260553296|gb|EEX26239.1| tryptophanyl-tRNA synthetase [Lactobacillus fermentum 28-3-CHN]
          Length = 337

 Score = 49.0 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 37/220 (16%), Positives = 68/220 (30%), Gaps = 30/220 (13%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     +Q++G + P  ++    ++  +    ++ RR +    +  
Sbjct: 12  PTGK-LHIGHYVGSLRERVKMQESGEYDPFIMIADQQALTDNARDPEKIRRSLTEVALDY 70

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
               +             K+   + +    L  +    L     S    N  +  E  + 
Sbjct: 71  LAVGL----------DPAKSTLFVQSQIPALAELNLYYLNLVTVSRLERNPTVKAEIQQK 120

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKL 221
              R     F  F Y + Q  D      N    L   G DQ   +    ++     +   
Sbjct: 121 NFNRSIPAGF--FTYPVSQTADITAFKAN----LVPVGDDQEPMLEQAREIVRTFNSIYG 174

Query: 222 FALTSP----------LLTTASGT-KMGKTLSGAIWLNKE 250
             L  P           +    G  KM K+L  AI+L+ +
Sbjct: 175 EVLVEPEGVFPPKGQGRIPGLDGNAKMSKSLGNAIYLSDD 214


>gi|281421738|ref|ZP_06252737.1| tryptophan--tRNA ligase [Prevotella copri DSM 18205]
 gi|281404233|gb|EFB34913.1| tryptophan--tRNA ligase [Prevotella copri DSM 18205]
          Length = 361

 Score = 49.0 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 45/307 (14%), Positives = 85/307 (27%), Gaps = 59/307 (19%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGH--KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +     LQ  G   +    M    ++  +    ++ R+ +    + 
Sbjct: 11  PTGK-LHLGHYIGSLQRRVQLQNAGDFDRMFVFMADVQALTDNADNPEKIRQNITEVALD 69

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNR-MLSFESV 159
                +     +          A +               L  + S   V R       +
Sbjct: 70  YLSAGLDPQKCTLYIQSMIPELAEL------------TTYLMNLISVSRVQRNPTVKTEI 117

Query: 160 RSR-LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
           + R  +    L F  F Y + QA D           +  G  DQ   +    +L  R   
Sbjct: 118 KMRNFEANIPLGF--FCYPVSQAADITAFKA---TTVPAG-EDQEPMLEVTRELVRRFNQ 171

Query: 219 PKLFALTSP------------LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRN--- 263
                L  P            L  T    KM K+L   I+++ +  + +   +   N   
Sbjct: 172 TYAPVLVEPEILLPEIACCRRLPGTDGKEKMSKSLGNCIYMSDDEKTVWKKVKKMSNGEP 231

Query: 264 ---------IDDADVVSFAKRLT-----------TLPMSEIDRMAKLQGKEINEAKKIIA 303
                    ++   V ++ +  +              + E+       G      KK + 
Sbjct: 232 RMSMEEPGHLEGNAVFTYLEAFSTPEDFAEFWPEFKTLDELKEQYVKGGIGDGTCKKFLN 291

Query: 304 TEITTMV 310
           + I  M+
Sbjct: 292 SVINKML 298


>gi|227514190|ref|ZP_03944239.1| tryptophan--tRNA ligase [Lactobacillus fermentum ATCC 14931]
 gi|227087453|gb|EEI22765.1| tryptophan--tRNA ligase [Lactobacillus fermentum ATCC 14931]
          Length = 337

 Score = 49.0 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 37/220 (16%), Positives = 68/220 (30%), Gaps = 30/220 (13%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     +Q++G + P  ++    ++  +    ++ RR +    +  
Sbjct: 12  PTGK-LHIGHYVGSLRERVKMQESGEYDPFIMIADQQALTDNARDPEKIRRSLTEVALDY 70

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
               +             K+   + +    L  +    L     S    N  +  E  + 
Sbjct: 71  LAVGL----------DPAKSTLFVQSQIPALAELNLYYLNLVTVSRLERNPTVKAEIQQK 120

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKL 221
              R     F  F Y + Q  D      N    L   G DQ   +    ++     +   
Sbjct: 121 NFNRSIPAGF--FTYPVSQTADITAFKAN----LVPVGDDQEPMLEQAREIVRTFNSIYG 174

Query: 222 FALTSP----------LLTTASGT-KMGKTLSGAIWLNKE 250
             L  P           +    G  KM K+L  AI+L+ +
Sbjct: 175 EVLVEPEGVFPPKGQGRIPGLDGNAKMSKSLGNAIYLSDD 214


>gi|145520883|ref|XP_001446297.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124413774|emb|CAK78900.1| unnamed protein product [Paramecium tetraurelia]
          Length = 411

 Score = 49.0 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 59/332 (17%), Positives = 108/332 (32%), Gaps = 62/332 (18%)

Query: 15  RGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +  + LD   +      Y G   +  S+H GHL   +   +LQ+    P+ +
Sbjct: 73  RGIFFSHRDLTQVLDAYEAGKGFYLYTGRGPSGDSMHVGHLMPFIFTKYLQEAFDVPVVI 132

Query: 74  MGGGTSIIGDPSFRDESRRMMRS------QEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
                 +  D  F  +S   +        +  ++ I     +  +FI + + +    M +
Sbjct: 133 -----ELSDDEKFFHKSETTLEEYQRYGYENAKDIIACGFDVNKTFI-FLSSQYAGHMYH 186

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY----- 182
           N   +C  ++     ++   F +N     ++                 Y  +QA      
Sbjct: 187 N---ICKFQHAITYSQLRGIFGLN---ESDNCGK------------VAYPAVQAAPSLSS 228

Query: 183 DFVELAKNYD--CRLQMGGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTASGTKM 237
            F  +    +  C +  G  DQ        D+  +LK PK   + +   P L    GTKM
Sbjct: 229 SFKHIFGKDEVMCLVPQG-IDQDPYFRMTRDVCYKLKVPKTGCIHSQFLPGLHGF-GTKM 286

Query: 238 GKTLS-GAIWLN------KEMTSPYNFWQYWR----------NIDDADVVSFAKRL--TT 278
           G T    AI+L       +E    +                 ++       + +      
Sbjct: 287 GTTDPTSAIFLTDTPKEIEEKIKKHAMSGGGMTKKEHQEKGADLTVDVPYHYLRFFLEDD 346

Query: 279 LPMSEIDRMAKLQGKEINEAKKIIATEITTMV 310
             + EI           +E KK + T IT +V
Sbjct: 347 ARLEEIRVQYGKGVMMTSEVKKELITVITKIV 378


>gi|19113895|ref|NP_592983.1| tryptophan-tRNA ligase Wrs1 (predicted) [Schizosaccharomyces pombe
           972h-]
 gi|1174553|sp|Q09692|SYWC_SCHPO RecName: Full=Tryptophanyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Tryptophan--tRNA ligase; Short=TrpRS
 gi|1052796|emb|CAA90500.1| tryptophan-tRNA ligase Wrs1 (predicted) [Schizosaccharomyces pombe]
          Length = 395

 Score = 49.0 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 24/63 (38%), Gaps = 1/63 (1%)

Query: 12  LSERGFIHQISNPR-ELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           L  RG      +    LD    +     Y G   ++ S+H GH+   M   WLQ     P
Sbjct: 58  LLRRGAFFSHRDFDMILDRYEQKKPFYLYTGRGPSSDSMHLGHMIPFMFCKWLQDVFQVP 117

Query: 71  ISL 73
           + +
Sbjct: 118 LVI 120


>gi|227824861|ref|ZP_03989693.1| conserved hypothetical protein [Acidaminococcus sp. D21]
 gi|226905360|gb|EEH91278.1| conserved hypothetical protein [Acidaminococcus sp. D21]
          Length = 353

 Score = 49.0 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 45/302 (14%), Positives = 90/302 (29%), Gaps = 65/302 (21%)

Query: 44  LTASSLHAGHLTQ-LMLLFWLQKTGH--KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    L     LQ +G   +   ++    ++         +      ++++
Sbjct: 11  PTG-HLHVGHYVGSLQNRVRLQNSGDFDEIYFMIADSQAL---------TDNAENPEKVR 60

Query: 101 ENIEKIKGIFSSFIKY-----GTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLS 155
           +N+          + Y        K    + +    L  +    +     S    N  + 
Sbjct: 61  QNV------LQVALDYLAVGIDPEKATIFIQSMVPALYELTAYYMDLVTVSRVQRNPTVK 114

Query: 156 FESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER 215
            E  +   +    L F  F Y + QA D       +   + +G  DQ   +    ++  +
Sbjct: 115 AEIQQKNFENSVPLGF--FCYPVSQAADITAFHATH---VPVG-EDQEPMLEQCREIVRK 168

Query: 216 LKTPKLFALTSP-----------LLTTASGT-KMGKTLSGAIWLNKE----MTSPYNFWQ 259
             +     LT P            L    G  KM K+L   I+L+ +         + + 
Sbjct: 169 FNSVYGETLTEPDIYLPPNKACYRLPGIDGKAKMSKSLGNCIYLSDDAETVKKKIMSMYT 228

Query: 260 --YWRNIDD------ADVVSFAKRLT-------TLP----MSEIDRMAKLQGKEINEAKK 300
                 + D        V ++    +        LP    + E+    +  G    + KK
Sbjct: 229 DPTHLQVSDPGHVEGNTVFTYLDAFSKPEHFAQFLPEYNNLDELKDHYRQGGLGDVKIKK 288

Query: 301 II 302
            +
Sbjct: 289 FL 290


>gi|223975661|gb|ACN32018.1| unknown [Zea mays]
          Length = 408

 Score = 49.0 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 58/338 (17%), Positives = 110/338 (32%), Gaps = 57/338 (16%)

Query: 15  RGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +  E LD+  +      Y G   ++ +LH GHL   M   +LQ+    P+ +
Sbjct: 73  RGLFFAHRDLNEILDLYENGQKFYLYTGRGPSSEALHLGHLIPFMFTKYLQEAFKVPLVI 132

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                      +   +  + +  +  ++ I     I  +FI             N     
Sbjct: 133 QLTDDEKYLWKNLTIQESKRLARENAKDIIACGFDIERTFIFSDFSFVGGAFYEN----- 187

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY-----DFVELA 188
                  + ++    ++N+ +        L+        + ++  +QA       F  L 
Sbjct: 188 -------MMQVARCVTMNKAIG--IFGFNLEDHIG----KVSFPPVQAVPSFPSSFPHLF 234

Query: 189 KNYD---CRLQMGGSDQWGNIICGIDLGERLKTPKLFAL---TSPLLTTASGTKMGKTLS 242
              D   C +     DQ        D+  R+   K   +     P L   + TKM  + +
Sbjct: 235 AGKDQLRCLIPC-AIDQDPYFRMTRDVAPRIGYQKPSLIESRFFPALQGEN-TKMSASDA 292

Query: 243 G-AIWLN------KEMTSPYNFWQYWRNID---------DADV-VSFAKRLTTLPMSEID 285
             AI++       K   + Y F     +I+         D DV + +      L   +  
Sbjct: 293 NSAIYVTDSAKEIKTKVNKYAFSGGQDSIELHRKLGANLDVDVPIKYLNF--FLEDDDEL 350

Query: 286 RMAKLQGKEIN----EAKKIIATEITTMV--HGREEAE 317
              K + KE      E K+ +   ++ +V  H R  A+
Sbjct: 351 AHIKKEYKEGRMLTGEVKQRLIAVLSEIVARHQRARAQ 388


>gi|242021429|ref|XP_002431147.1| Tryptophanyl-tRNA synthetase, putative [Pediculus humanus corporis]
 gi|212516396|gb|EEB18409.1| Tryptophanyl-tRNA synthetase, putative [Pediculus humanus corporis]
          Length = 441

 Score = 49.0 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 54/321 (16%), Positives = 100/321 (31%), Gaps = 48/321 (14%)

Query: 12  LSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           L  RG      +    L+   S      Y G   ++ S+H GHL   +   WLQ+  + P
Sbjct: 102 LLRRGIFFSHRDMHSILNAYESGKPFYLYTGRGPSSGSMHLGHLIPFIFTKWLQEVFNVP 161

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           + +              D+ + + +  +++E  +         I  G       + ++  
Sbjct: 162 LVI-----------QLTDDEKFLWKDLKLEEANKLAYENAKDIIAVGFDSEKTFIFSDLD 210

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA-------YD 183
           +L      +  R I     + + ++F  V+       S    +  +  +QA       + 
Sbjct: 211 YLG--SCSNFYRNI---VKIQKSVTFNQVKGIFGFGDSDCIGKIAFPAIQAAPSFSTSFP 265

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKL--FALTSPLLTTASGTKMGKT 240
           F+       C +     DQ        D+  +L  T      +   P L  A  TKM  +
Sbjct: 266 FIFKDSKIPCLIPC-AIDQDPYFRMTRDVAPKLGFTKPALLHSTFFPALQGAK-TKMSAS 323

Query: 241 LSG-AIWLN------KEMTSPYNFWQ----------YWRNIDDADVVSFAKRL--TTLPM 281
               +I+L       K   + Y F            +  N D      +          +
Sbjct: 324 DPNSSIFLTDTPKQIKNKINKYAFSGGQATIEEHREFGGNCDIDISYQYLTFFLDDDEKL 383

Query: 282 SEIDRMAKLQGKEINEAKKII 302
            EI +          E KKI+
Sbjct: 384 MEIKKDYASGELLTGELKKIL 404


>gi|167767156|ref|ZP_02439209.1| hypothetical protein CLOSS21_01675 [Clostridium sp. SS2/1]
 gi|167711131|gb|EDS21710.1| hypothetical protein CLOSS21_01675 [Clostridium sp. SS2/1]
          Length = 385

 Score = 49.0 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 37/236 (15%), Positives = 74/236 (31%), Gaps = 35/236 (14%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGH--KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +     LQ +G   +   ++    ++  +    ++ R+      I 
Sbjct: 44  PTGR-LHVGHYVGSLKERVRLQNSGKFDEIYIMIADAQALTDNAEHPEKVRQ-----NIM 97

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           +                  K +  + +    L  + +  +     +    N  +  E  +
Sbjct: 98  QVALDYLACG-----LDPEKVNIFIQSMVPELTELSFYYMNLVTVARVQRNPTVKAEIKQ 152

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
              +    + F  F Y I QA D       +   +   G DQ   +    ++  +  +  
Sbjct: 153 KNFEASIPVGF--FTYPISQAADITA----FRATVVPAGEDQMPMVEQCKEIVHKFNSVY 206

Query: 221 LFALTSPL-----------LTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNI 264
              LT P            L    G  KM K+L   I+L+ E   P +  +   ++
Sbjct: 207 GETLTDPQIVLPDNQACLRLPGIDGKAKMSKSLGNCIYLSDE---PQDIKKKVMSM 259


>gi|307565011|ref|ZP_07627528.1| tryptophan--tRNA ligase [Prevotella amnii CRIS 21A-A]
 gi|307346324|gb|EFN91644.1| tryptophan--tRNA ligase [Prevotella amnii CRIS 21A-A]
          Length = 362

 Score = 49.0 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 57/384 (14%), Positives = 109/384 (28%), Gaps = 91/384 (23%)

Query: 44  LTASSLHAGHLTQLMLLFW---LQKTGH--KPISLMGGGTSIIGDPSFRDESRRMMRSQE 98
            T   LH GH      L     LQ  G   K    M    ++  +    ++ R+      
Sbjct: 11  PTGK-LHLGHYIG--SLRRRVELQNIGDYDKMFVFMADVQALTDNADNPEKIRQ-----N 62

Query: 99  IQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
           I E       +          K    + +    L  +     +  I              
Sbjct: 63  IIEVALDYLSVG-----LDPSKCVLYIQSMIPELAELTTY-FMNLITVSRVQRNPTVKTE 116

Query: 159 VRSR-LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK 217
           ++ R  +    + F  F Y + QA D   +A      +  G  DQ   I    ++  R  
Sbjct: 117 IKMRNFEANIPMGF--FAYPVSQAAD---IAAFKGTTVPAG-EDQEPMIEVTREIVRRFN 170

Query: 218 T------------PKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWR--- 262
                            A    L  T    KM K+L   I+L+    +    WQ  R   
Sbjct: 171 QIYAPVLVEPNIMLPQNATARRLPGTDGKEKMSKSLGNCIYLSDSADT---VWQKVRGMY 227

Query: 263 ------NIDD------ADVVSFAKRLT-----------TLPMSEIDRMAKLQGKEINEAK 299
                 N+ D        V ++    +              + E+       G    + K
Sbjct: 228 TDPAHINVSDPGHVEGNAVFTYLDAFSTDEDFAEFWPEFANIEELKAAYTAGGVGDMKCK 287

Query: 300 KIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI--------SISKDEVSRGMG 351
           K++ + +  ++       +   A    F+     Q +P +         +++ E ++ M 
Sbjct: 288 KLLNSVLNKIL-------EPIRARRHTFE-----QDIPEVYNILKKGSEVARAEAAKTMD 335

Query: 352 LLTLIVKAGFATS----TNEARRH 371
            +   ++  +        ++A R 
Sbjct: 336 EVRAAMQINYFDDAELIRSQAERF 359


>gi|298372517|ref|ZP_06982507.1| tryptophan--tRNA ligase [Bacteroidetes oral taxon 274 str. F0058]
 gi|298275421|gb|EFI16972.1| tryptophan--tRNA ligase [Bacteroidetes oral taxon 274 str. F0058]
          Length = 328

 Score = 49.0 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 50/306 (16%), Positives = 96/306 (31%), Gaps = 59/306 (19%)

Query: 35  VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMM 94
             T   G   T + LH G+    M+ F   +  H+    +    S+   P  +      M
Sbjct: 2   KKTVVSGIRPTGN-LHLGNYYGAMVNFLKMQEEHRCFFFIADWHSLTTHPDPK------M 54

Query: 95  RSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN----ETWLCSIKYIDLLREIGSFFSV 150
               ++  + +              K    + ++          +     L E+    S 
Sbjct: 55  LKTNVKNILAEYLACG-----LDPKKATIYVQSDVKEIAELYLLLNMQAYLGELEKTVSF 109

Query: 151 NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGI 210
                 +  R       +++     Y +L A D +     ++      G DQ  ++    
Sbjct: 110 -----KDKARK---NPSNVNAGLLTYPVLMATDILI----HNADFVPVGKDQEQHLEMTR 157

Query: 211 DLGERLKT---------PKLFALTSPLL--TTASGT-KMGKTLSGAIWLNKEMTSPYNFW 258
           +  +R  +         P+ F     L+      G+ KMGK+   AI+L  E   P    
Sbjct: 158 NYAQRFNSRYETDFFTLPQPFNFGQELIKIPGLDGSGKMGKSEGNAIYLIDE---PKEIE 214

Query: 259 QYW-RNIDDADV-------VSFAK-RLTTL---PMSEIDRMAKLQG--KEIN--EAKKII 302
           +   R + D+ V         + +   T +     +++      Q    EI   E KK +
Sbjct: 215 KKVKRALTDSGVTEPNQPKPDYIENLFTIMRVVSTADVVEHFDRQWNRAEIRYGELKKQL 274

Query: 303 ATEITT 308
           A +I  
Sbjct: 275 AEDIIK 280


>gi|150866939|ref|XP_001386705.2| hypothetical protein PICST_50481 [Scheffersomyces stipitis CBS
           6054]
 gi|149388195|gb|ABN68676.2| predicted protein [Scheffersomyces stipitis CBS 6054]
          Length = 471

 Score = 49.0 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/120 (20%), Positives = 45/120 (37%), Gaps = 10/120 (8%)

Query: 299 KKIIATEITTMVHGREEAEKAATA-------AMECFDMSIHSQHMPTISISKDEVSRGMG 351
           +K  A   T   HG    EK   A        +   D S+    +    ++    +    
Sbjct: 44  QKWNAKAETRAYHGEHLTEKRWKAIFDPSLETVAQLDASLKGSKVAPTPMTLQTYASLEK 103

Query: 352 LLTLIV-KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG--NIKLSFGK 408
            L L V ++ FA+S  +AR  +   ++ +N  +I +    +K  D        + L+ G+
Sbjct: 104 RLELAVFRSMFASSVRQAREFILGGSVSVNGVVIKHPSFPLKSGDIFHVKPEKVLLAMGR 163


>gi|325134552|gb|EGC57196.1| tryptophanyl-tRNA synthetase [Neisseria meningitidis M13399]
 gi|325205771|gb|ADZ01224.1| tryptophanyl-tRNA synthetase [Neisseria meningitidis M04-240196]
          Length = 336

 Score = 49.0 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 40/218 (18%), Positives = 61/218 (27%), Gaps = 49/218 (22%)

Query: 174 FNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSP------ 227
           F+Y IL   D +    N +  +   G DQ  ++    D+  R         T P      
Sbjct: 136 FSYPILMTADILMFNAN-EVPV---GRDQIQHVEMARDIAGRFNHRFKEIFTLPEVKIDE 191

Query: 228 ---LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWR---------NIDDAD-VVSFAK 274
              LL    G KM K+    I L +                         D   +    K
Sbjct: 192 NVELLVGLDGRKMSKSYGNTIPLWENDKKTQKSVNKIITNMKEPGEPKQPDESPLFEIYK 251

Query: 275 RLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQ 334
             +T   +         G    EAKK++A +I        E  +      E    +    
Sbjct: 252 AFSTPSETVEFTKMLADGLAWGEAKKLLAAKINA------ELAEPRERYNEL---TADPS 302

Query: 335 HMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHL 372
            +  I                 ++AG   +  EAR  L
Sbjct: 303 QIEEI-----------------LQAGAQKARKEARELL 323


>gi|291279394|ref|YP_003496229.1| tryptophanyl-tRNA synthetase [Deferribacter desulfuricans SSM1]
 gi|290754096|dbj|BAI80473.1| tryptophanyl-tRNA synthetase [Deferribacter desulfuricans SSM1]
          Length = 326

 Score = 49.0 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 40/224 (17%), Positives = 72/224 (32%), Gaps = 34/224 (15%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGG---TSIIGDPSFRDESRRMMRSQ 97
           G   T   LH GH    +  +   +  ++    +      T+   +P   +  R+ +   
Sbjct: 7   GMRPTGK-LHIGHYFGALKNWVKLQEQYECFYFVADWHALTTSYENPEDINTFRKELILD 65

Query: 98  EIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNR-MLSF 156
            +   I+  K       K        ++      L  I  +  L    S+  +   M   
Sbjct: 66  WLSVGIDPEKSTLFVQSKNLYHAELFVL------LSMITPVAWLERCPSYKEIKMEMKDR 119

Query: 157 ESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL 216
           +          +L FL  +Y +LQ  D + L       +   G DQ  +I    ++  R 
Sbjct: 120 DL--------NNLGFL--SYPLLQTVD-IILYSAKYVPV---GVDQIPHIEISREIVRRF 165

Query: 217 K--------TPKLFALT-SPLLTTASGTKMGKTLSGAIWLNKEM 251
                          LT  P L    G KM K+    I L++++
Sbjct: 166 HYLYDCEIFVEPEGLLTEVPKLLGTDGRKMSKSYGNTIMLSEDL 209


>gi|308389127|gb|ADO31447.1| tryptophanyl-tRNA synthetase [Neisseria meningitidis alpha710]
 gi|325136562|gb|EGC59164.1| tryptophanyl-tRNA synthetase [Neisseria meningitidis M0579]
          Length = 336

 Score = 49.0 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 40/218 (18%), Positives = 61/218 (27%), Gaps = 49/218 (22%)

Query: 174 FNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSP------ 227
           F+Y IL   D +    N +  +   G DQ  ++    D+  R         T P      
Sbjct: 136 FSYPILMTADILMFNAN-EVPV---GRDQIQHVEMARDIAGRFNHRFKEIFTLPEVKIDE 191

Query: 228 ---LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWR---------NIDDAD-VVSFAK 274
              LL    G KM K+    I L +                         D   +    K
Sbjct: 192 NVELLVGLDGRKMSKSYGNTIPLWENDKKTQKSVNKIITNMKEPGEPKQPDESPLFEIYK 251

Query: 275 RLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQ 334
             +T   +         G    EAKK++A +I        E  +      E    +    
Sbjct: 252 AFSTPSETVEFTKMLADGLAWGEAKKLLAAKINA------ELAEPRERYNEL---TADPS 302

Query: 335 HMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHL 372
            +  I                 ++AG   +  EAR  L
Sbjct: 303 QIEEI-----------------LQAGAQKARKEARELL 323


>gi|221091188|ref|XP_002154182.1| PREDICTED: similar to Tryptophanyl-tRNA synthetase, cytoplasmic
           (Tryptophan--tRNA ligase) (TrpRS) [Hydra magnipapillata]
          Length = 433

 Score = 49.0 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 39/260 (15%), Positives = 78/260 (30%), Gaps = 32/260 (12%)

Query: 15  RGFIHQISNPR-ELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +    L           Y G   ++ ++H GHL   +   ++Q   + P+ +
Sbjct: 96  RGIFFSQRDLDFILSKAEKHEPFYLYTGRGPSSEAMHLGHLIPFIFTKYIQDAFNVPLII 155

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKI-KGIFSSFIKYGTGKTDALMLNNETWL 132
                         D+ + + + +   E   ++        I  G  K +  + +N  +L
Sbjct: 156 -----------QLTDDEKFLWKEELTLEEANRLSYENAKDIIACGFDKKNTFIFSNMDYL 204

Query: 133 CSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA--------YDF 184
                 +  R I     + + ++F  V+            + ++  +QA           
Sbjct: 205 GQ--STEFYRTI---LRIQKCVTFNQVKGIFGFGDGDKIGKISFPAIQAAPSFSSTFPQI 259

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKL--FALTSPLLTTASGTKMGKTL 241
                N  C +     DQ        D+  RL         +   P L  A  TKM  + 
Sbjct: 260 FNGKSNIPCLIPC-AIDQDPYFRMTRDVAPRLNYLKPALLHSTFFPALQGAK-TKMSSSD 317

Query: 242 SG-AIWLNKEMTSPYNFWQY 260
              +I+L        +    
Sbjct: 318 PNSSIFLTDSAKQIKDKINK 337


>gi|170042480|ref|XP_001848952.1| tyrosyl-tRNA synthetase [Culex quinquefasciatus]
 gi|167866028|gb|EDS29411.1| tyrosyl-tRNA synthetase [Culex quinquefasciatus]
          Length = 526

 Score = 49.0 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 41/245 (16%), Positives = 72/245 (29%), Gaps = 23/245 (9%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M A  ++    L  R    ++     +  +  +  +  Y G   T    H  +   +  +
Sbjct: 1   MTALTAEEKEQLIVRNL-QEVLGQDAMRGVLKERDLRIYWGTATTGKP-HIAYFVPMSKV 58

Query: 61  FWLQKTGHKPISLMGGGTSII---GDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG 117
               K G +   L     + +     P    + R       I+  +  +       +K+ 
Sbjct: 59  ADFLKAGCEVTILFADLHAYLDNMKAPWSLLQERTKYYEAVIKAMLTSLGVPLEK-LKFV 117

Query: 118 TGKTDALMLNNETWLCSIKYIDLLREIGSFFSV-NRMLSFESVRSRLKREQSLSFLEFNY 176
            G            L     +D+ R          +    E V+   + E  L      Y
Sbjct: 118 RGTDYQ--------LSKEYTLDVYRLSSVVTQHDAKKAGAEVVK---QVEHPL-MSGILY 165

Query: 177 MILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTK 236
             LQA D   L        Q GG DQ            +L   K   L +P++   +G K
Sbjct: 166 PGLQALDEEYLK----VDAQFGGVDQRKIFTFAEKYLPQLGYGKRVHLMNPMIPGLAGGK 221

Query: 237 MGKTL 241
           M  + 
Sbjct: 222 MSSSE 226


>gi|315932679|gb|EFV11609.1| Tryptophanyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           327]
          Length = 213

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 36/228 (15%), Positives = 66/228 (28%), Gaps = 33/228 (14%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   +   LH G+    +      +   +    +    ++          +  +      
Sbjct: 6   GLQPSGD-LHIGNYFGAIKQMVDAQEKSQMFMFIANYHAMTSSQDGEKLKQNSL-KAAAA 63

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETW-LCSIKYIDLLREIGSFFSVNRMLSFESV 159
                I    S F      K    +     W L     + LL    S+         + V
Sbjct: 64  FLSLGIDPQKSVFWLQSDVKEVMELY----WILSQFTPMGLLERAHSY--------KDKV 111

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
              L     L    F+Y +L A D +     +D ++   G DQ  ++    D+  ++   
Sbjct: 112 AKGLSASHGL----FSYPVLMAADILL----FDTQIVPVGKDQIQHVEIARDIALKVNNE 163

Query: 220 KLFALTSP---------LLTTASGTKMGKTLSGAIWL-NKEMTSPYNF 257
                T P         ++    G KM K+    I + + E T    F
Sbjct: 164 WGEIFTLPEAKVNEEVAVVVGTDGAKMSKSYQNTIDIFSSEKTLKNKF 211


>gi|195328493|ref|XP_002030949.1| GM25723 [Drosophila sechellia]
 gi|194119892|gb|EDW41935.1| GM25723 [Drosophila sechellia]
          Length = 664

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 41/251 (16%), Positives = 73/251 (29%), Gaps = 38/251 (15%)

Query: 28  DILCSQGVVTAYIGYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSIIGDPSF 86
           +   S+     + G   T  SLH G+    +     LQ         +          S 
Sbjct: 72  EEHNSRWPRKIFSGIQPTG-SLHLGNYLGAVRKWVELQNARDDVTVCIVDL------HSI 124

Query: 87  RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGS 146
                  +  + I      +             K+   + +         +I  L  + +
Sbjct: 125 TMPHNPPLLRENIFTMAATLLACG-----IDPTKSTLFVQSAVAEHAEFNWI--LSSLTT 177

Query: 147 FFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNI 206
              + ++  F   +SRL ++  L    + Y +LQA D + L K+    +   G+DQ  +I
Sbjct: 178 MPRLAQLPQFRE-KSRLLKDVPLGL--YVYPVLQAAD-IMLYKSTHVPV---GADQIQHI 230

Query: 207 ICGIDLGERLKTPKLFALTSPLLT--TASG------------TKMGKTLSGAIWLNKEMT 252
                L         +  T P+ T     G             KM K  +          
Sbjct: 231 QLAQHLSRIYNGR--YGETFPVCTAIIEDGDASRVLSLQDPSKKMSKWEANPKATINLCD 288

Query: 253 SPYNFWQYWRN 263
           SP    Q  + 
Sbjct: 289 SPDLITQKIKK 299


>gi|158290282|ref|XP_311880.3| AGAP003003-PA [Anopheles gambiae str. PEST]
 gi|157017819|gb|EAA07816.3| AGAP003003-PA [Anopheles gambiae str. PEST]
          Length = 542

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 40/236 (16%), Positives = 68/236 (28%), Gaps = 23/236 (9%)

Query: 10  SILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
             L  R    ++     L  +  +  +  Y G   T    H  +   +  +    K G +
Sbjct: 11  EHLITRNL-QEVLGQDNLRAVLKERDLKIYWGTATTGKP-HIAYFVPMSKVADFLKAGCE 68

Query: 70  PISLMGGGTSII---GDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
              L     + +     P    + R       I+  +  +       +K+  G       
Sbjct: 69  VTILFADLHAYLDNMKAPWSLLKERTKYYEAVIKAMLTSLGVPLDK-LKFVCGTDYQ--- 124

Query: 127 NNETWLCSIKYIDLLREIGSFFSV-NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
                L     +D+ R          +    E V+   + E  L      Y  LQA D  
Sbjct: 125 -----LSKEYTLDVYRLSSVVTQHDAKKAGAEVVK---QVEHPL-MSGILYPGLQALDEE 175

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            L        Q GG DQ            +L   K   L +P++   +G KM  + 
Sbjct: 176 YLK----VDAQFGGVDQRKIFTFAEKYLPQLGYAKRIHLMNPMIPGLAGGKMSSSE 227


>gi|320531839|ref|ZP_08032755.1| tryptophan--tRNA ligase [Actinomyces sp. oral taxon 171 str. F0337]
 gi|320135935|gb|EFW27967.1| tryptophan--tRNA ligase [Actinomyces sp. oral taxon 171 str. F0337]
          Length = 370

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 46/239 (19%), Positives = 72/239 (30%), Gaps = 34/239 (14%)

Query: 22  SNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL-FWLQKTGHKPISLMGGGTSI 80
           S   E DI  + G    + G   T + +H GH    M     +Q  G     L+     +
Sbjct: 28  SAEIEADIAVNPGRYRMFTGVRPTGN-MHLGHYFGTMHSWKTIQDAGVDTWILVADY-QV 85

Query: 81  IGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDL 140
           I D       R  + S         +    S+          A+   N         +  
Sbjct: 86  ITDRDGVGPIRERVLSLVTDALAVGVDPQRSTIF-----AHSAVPAQN------QLMLPF 134

Query: 141 LREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGS 200
           L  +              + +     +++S L   Y + QA D +    N    L   G 
Sbjct: 135 LSLVTESELHRNPTVKSELEA--TDGRAMSGLLLTYPVHQATDILFCQAN----LVPVGK 188

Query: 201 DQWGNIICGI--------DLGERLKTPKLF----ALTS--PLLTTASGTKMGKTLSGAI 245
           DQ  ++              G  +K   +F    AL S  P+L    G KM K+    I
Sbjct: 189 DQLPHLEQARLIAQRFDKRYGRAVKEHPVFRRPEALLSEAPMLLGLDGEKMSKSRRNTI 247


>gi|261392273|emb|CAX49793.1| tryptophanyl-tRNA synthetase (tryptophan--tRNA ligase; TrpRS)
           [Neisseria meningitidis 8013]
          Length = 336

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 42/218 (19%), Positives = 62/218 (28%), Gaps = 49/218 (22%)

Query: 174 FNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSP------ 227
           F+Y IL   D +    N +  +   G DQ  ++    D+  R         T P      
Sbjct: 136 FSYPILMTADILMFNAN-EVPV---GRDQIQHVEMARDIAGRFNHRFKEIFTLPEVKIDE 191

Query: 228 ---LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWR---------NIDDAD-VVSFAK 274
              LL    G KM K+    I L +                         D   +    K
Sbjct: 192 NVELLVGLDGRKMSKSYGNTIPLWENDKKTQKSVNKIITNMKEPGEPKQPDESPLFEIYK 251

Query: 275 RLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQ 334
             +T   +         G    EAKK++A +I   +    E   A TA            
Sbjct: 252 AFSTPSETVEFTKMLADGLAWGEAKKLLAAKINAELAEPRERYNALTA---------DPS 302

Query: 335 HMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHL 372
            +  I                 ++AG   +  EAR  L
Sbjct: 303 QIEEI-----------------LQAGAQKARKEARELL 323


>gi|237756993|ref|ZP_04585451.1| tryptophan--tRNA ligase [Sulfurihydrogenibium yellowstonense SS-5]
 gi|237690847|gb|EEP59997.1| tryptophan--tRNA ligase [Sulfurihydrogenibium yellowstonense SS-5]
          Length = 392

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/158 (19%), Positives = 50/158 (31%), Gaps = 25/158 (15%)

Query: 174 FNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT-------PKLFALT- 225
           F Y IL A D +     Y+      G DQ  +I    ++  R               LT 
Sbjct: 191 FGYPILMAADILI----YNADAVPVGEDQLPHIEITREIARRFNNLYSPIFKEPQALLTE 246

Query: 226 SPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDAD------------VVSFA 273
           S  L    G KM K+ +  I L++   +        +                  V S+ 
Sbjct: 247 SSKLLGIDGRKMSKSYNNTIALSEPRETLEKKVLSMKTDPQRLKKTDPGRPEICNVFSYH 306

Query: 274 KRLTTL-PMSEIDRMAKLQGKEINEAKKIIATEITTMV 310
           K  T L  + +I    +       E K+I+   +   +
Sbjct: 307 KYFTDLQEVDKIQAKCRNAEIGCVECKRILFENVDKFL 344


>gi|184154543|ref|YP_001842883.1| tryptophanyl-tRNA synthetase II [Lactobacillus fermentum IFO 3956]
 gi|183225887|dbj|BAG26403.1| tryptophanyl-tRNA synthase [Lactobacillus fermentum IFO 3956]
          Length = 337

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 37/220 (16%), Positives = 68/220 (30%), Gaps = 30/220 (13%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     +Q++G + P  ++    ++  +    ++ RR +    +  
Sbjct: 12  PTGK-LHIGHYIGSLRERVKMQESGEYDPFIMIADQQALTDNARDPEKIRRSLTEVALDY 70

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
                       +     K+   + +    L  +    L     S    N  +  E  + 
Sbjct: 71  LA----------VSLDPAKSTLFVQSQIPALAELNLYYLNLVTVSRLERNPTVKAEIQQK 120

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKL 221
              R     F  F Y + Q  D      N    L   G DQ   +    ++     +   
Sbjct: 121 NFNRSIPAGF--FTYPVSQTADITAFKAN----LVPVGDDQEPMLEQAREIVRTFNSIYG 174

Query: 222 FALTSP----------LLTTASGT-KMGKTLSGAIWLNKE 250
             L  P           +    G  KM K+L  AI+L+ +
Sbjct: 175 EVLVEPEGVFPPKGQGRIPGLDGNAKMSKSLGNAIYLSDD 214


>gi|167567430|ref|ZP_02360346.1| tryptophanyl-tRNA synthetase II [Burkholderia oklahomensis EO147]
          Length = 346

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 44/292 (15%), Positives = 91/292 (31%), Gaps = 43/292 (14%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
            T + LH GH    +      +  H+   L+    ++  +    D+ RR      + E  
Sbjct: 20  PTGA-LHLGHYIGSLKTRVALQDTHRQFILVADTQALTDNAHDPDKVRR-----NVIEVA 73

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR- 162
                +          ++   + +    L  +     L  +            + + +R 
Sbjct: 74  LDYLAVG-----IDPRRSTIAVQSGLPALAELTLF-YLNFVTVARLERNPTIKDEIHARG 127

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT---- 218
             R+    FL   Y + QA D      +    + +G  DQ   I    ++  R+      
Sbjct: 128 FGRDIPAGFL--CYPVAQAADITAFKAD---TVPVG-DDQLPLIEQTNEIVRRINRQAGV 181

Query: 219 ---PKLFAL--TSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYW------RNIDD 266
              P+  AL  T+  L    G TKM K+   AI L+    +  +  +          + D
Sbjct: 182 DVLPEANALIPTTGRLPGVDGKTKMSKSQGNAIPLSSSPDAIADAVKRMYTDPNHLRVSD 241

Query: 267 ------ADVVSFAKRLTTLP--MSEIDRMAKLQGKEINEAKKIIATEITTMV 310
                   V ++       P  +  +    +  G      K+ +  ++  ++
Sbjct: 242 PGTVEGNVVFTYLDAFDDEPGEVERLKAAYRAGGLGDMTLKRRLEDKLQALI 293


>gi|146092762|ref|XP_001466512.1| tryptophanyl-tRNA synthetase [Leishmania infantum]
 gi|134070875|emb|CAM69551.1| putative tryptophanyl-tRNA synthetase [Leishmania infantum JPCM5]
          Length = 396

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/125 (20%), Positives = 41/125 (32%), Gaps = 12/125 (9%)

Query: 15  RGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +    LD          Y G   ++ S+H GHL   M   WLQ T H P+ +
Sbjct: 56  RGIFFSHRDLNLILDAYEKGQPFYLYTGRGPSSESMHVGHLIPFMFTKWLQDTFHVPLVI 115

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                 +  D  F  +    +   EI +            I +G       +  +  ++ 
Sbjct: 116 -----QLTDDEKFFFKD---LTMDEIDKMT---TENLKDIIAFGFDPKLTFIFRDFEYVG 164

Query: 134 SIKYI 138
            +  I
Sbjct: 165 RMYRI 169


>gi|147899131|ref|NP_001084545.1| tryptophanyl-tRNA synthetase [Xenopus laevis]
 gi|46250198|gb|AAH68695.1| MGC81110 protein [Xenopus laevis]
          Length = 475

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 54/345 (15%), Positives = 112/345 (32%), Gaps = 50/345 (14%)

Query: 15  RGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +  + LD   ++     Y G   ++ +LH GHL   +   WLQ+  + P+ +
Sbjct: 139 RGIFFSHRDMHQVLDAYENKKPFYLYTGRGPSSEALHVGHLIPFIFTKWLQEVFNVPLVV 198

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                         D+ + + +   +++  +         I  G       + ++  ++ 
Sbjct: 199 -----------QLTDDEKYLWKDLTLEKAYQYSIENAKDIIACGFDVNKTFIFSDLEYMG 247

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA--------YDFV 185
                       +   V + ++F  V+       S    + ++  +QA         +  
Sbjct: 248 KSSGF-----YQNVVKVQKHVTFNQVKGIFGFTDSDCIGKISFPAIQAAPSFSSSFPEIF 302

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKL---FALTSPLLTTASGTKMGKTLS 242
           +  K+  C +     DQ        D+  R+  PK     +   P L  A  TKM  +  
Sbjct: 303 KGRKDIQCLIPC-AIDQDPYFRMTRDVAPRINYPKPALMHSTFFPALQGAQ-TKMSASDP 360

Query: 243 G-AIWLN------KEMTSPYNF----------WQYWRNIDDADVVSFAKRL--TTLPMSE 283
             +I+L       K   + Y F           Q+  N +      +          + +
Sbjct: 361 NSSIFLTDTAKQIKNKINKYAFSGGKDTIEEHRQFGGNWEVDVSYMYLTFFLEDDERLEQ 420

Query: 284 IDRMAKLQGKEINEAKKIIATEITTMVHGREEAEK-AATAAMECF 327
           I +          E KKI+   +  ++   +E  K     A++ F
Sbjct: 421 IKQDYSSGALLTGELKKILIETLQPLIAAHQERRKHITEEAVKQF 465


>gi|158428905|pdb|2J5B|A Chain A, Structure Of The Tyrosyl Trna Synthetase From Acanthamoeba
           Polyphaga Mimivirus Complexed With Tyrosynol
 gi|158428906|pdb|2J5B|B Chain B, Structure Of The Tyrosyl Trna Synthetase From Acanthamoeba
           Polyphaga Mimivirus Complexed With Tyrosynol
          Length = 348

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 55/313 (17%), Positives = 103/313 (32%), Gaps = 35/313 (11%)

Query: 19  HQISNPRELDILCSQGVV-TAYIGYDLTASSLHAGH-LTQLMLLFWLQKTGHKPISLMGG 76
            +      L  L   G + TAY G++ +   +H    L  +M    + + G + I  +  
Sbjct: 23  EECETLDRLKQLVDSGRIFTAYNGFEPSGR-IHIAQALITVMNTNNMIECGGQMIIYIAD 81

Query: 77  GTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIK 136
             + +   + +          +I+E       +F +      G        +E    +  
Sbjct: 82  WFAKM---NLKMNG----DINKIRELGRYFIEVFKACGINLDGTRFIWA--SEFIASNPS 132

Query: 137 YIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQ 196
           YI+ + +I  F +++R+     +  R      L   +  Y  +QA D  EL       + 
Sbjct: 133 YIERMLDIAEFSTISRVKRCCQIMGR-NESDCLKASQIFYPCMQAADVFELVPE-GIDIC 190

Query: 197 MGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG--TKMGKTLS-GAIWLNKEMTS 253
             G DQ    +  I+           +L+  +L + SG   KM K+   GAI+++     
Sbjct: 191 QLGIDQRKVNMLAIEYANDRGLKIPISLSHHMLMSLSGPKKKMSKSDPQGAIFMDDTEQE 250

Query: 254 PYNFWQYWRNID---DADVVSFAKRLTTL-------------PMSEIDRMAKLQGKEINE 297
                      D   D  +  + K L                 +  I        K   E
Sbjct: 251 VSEKISRAYCTDETFDNPIFEYIKYLLLRWFGTLNLCGKIYTDIESIQEDFSSMNK--RE 308

Query: 298 AKKIIATEITTMV 310
            K  +A  I T++
Sbjct: 309 LKTDVANYINTII 321


>gi|159045330|ref|YP_001534124.1| RNA pseudouridine synthase [Dinoroseobacter shibae DFL 12]
 gi|157913090|gb|ABV94523.1| RNA pseudouridine synthase [Dinoroseobacter shibae DFL 12]
          Length = 322

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 11/55 (20%), Positives = 24/55 (43%), Gaps = 1/55 (1%)

Query: 341 ISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           ++ +    G  +  ++ +AG A S  EA R +    + +N   + +  L +   D
Sbjct: 1   MADNTTPPGDRIAKVLARAGIA-SRREAERLIAEGRVAVNGKTVDSPALNVTEAD 54


>gi|213692730|ref|YP_002323316.1| hemolysin A [Bifidobacterium longum subsp. infantis ATCC 15697]
 gi|213524191|gb|ACJ52938.1| hemolysin A [Bifidobacterium longum subsp. infantis ATCC 15697]
          Length = 276

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 8/40 (20%), Positives = 20/40 (50%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           +V +G   S  +A+R +K+  ++++   I+     +K   
Sbjct: 38  LVASGLVESRAKAQRLIKAGHVRVDGETITKPSFMVKAGH 77


>gi|57233922|ref|YP_182054.1| tryptophanyl-tRNA synthetase [Dehalococcoides ethenogenes 195]
 gi|57224370|gb|AAW39427.1| tryptophanyl-tRNA synthetase [Dehalococcoides ethenogenes 195]
          Length = 323

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 42/294 (14%), Positives = 91/294 (30%), Gaps = 45/294 (15%)

Query: 37  TAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRS 96
             + G   T   LH G+    +  +   +  ++ I  +    +             +   
Sbjct: 3   RVFSGVRPTGR-LHLGNYLGAVKNYVALQDDYECIYCVVDIHA-------------LTTL 48

Query: 97  QEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSF 156
           +E     E I  +    +  G      ++          +  +L    G    ++ +L  
Sbjct: 49  EETDALKENIYEMMLDLLASGLDPKKCILFVQSQ---VPEINELFTLFGMITPLSWLLRV 105

Query: 157 ESVRS--RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
            + +   R+    ++++    Y +LQA D       Y   L   G DQ  ++    ++  
Sbjct: 106 PTFKEKVRMH-PDNVNYGLVGYPVLQAADI----SLYKADLVPVGVDQLPHLELTREIVR 160

Query: 215 RLKTP--------KLFALTSPLLTTASGT-KMGKTLSGAI--WLNKEM---------TSP 254
           R            +      P +    G  KM K+L+  I   L++E          T P
Sbjct: 161 RFNEKFGDTFPEAQARLTNFPTVVGLDGKDKMSKSLNNHIELALSEEETAKKVMSAVTDP 220

Query: 255 YNFWQYWRNIDD-ADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
              ++      D  +V       +   +++I    +       + K+ +A  I 
Sbjct: 221 ARQYKTDPGHPDICNVYKLHNYFSPQAVAQIADDCRNARIGCVQCKRALAEAIN 274


>gi|322500654|emb|CBZ35731.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 396

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/125 (20%), Positives = 41/125 (32%), Gaps = 12/125 (9%)

Query: 15  RGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +    LD          Y G   ++ S+H GHL   M   WLQ T H P+ +
Sbjct: 56  RGIFFSHRDLNLILDAYEKGQPFYLYTGRGPSSESMHVGHLIPFMFTKWLQDTFHVPLVI 115

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                 +  D  F  +    +   EI +            I +G       +  +  ++ 
Sbjct: 116 -----QLTDDEKFFFKD---LTMDEIDKMT---TENLKDIIAFGFDPKLTFIFRDFEYVG 164

Query: 134 SIKYI 138
            +  I
Sbjct: 165 RMYRI 169


>gi|304383612|ref|ZP_07366071.1| tryptophan--tRNA ligase [Prevotella marshii DSM 16973]
 gi|304335136|gb|EFM01407.1| tryptophan--tRNA ligase [Prevotella marshii DSM 16973]
          Length = 329

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 47/300 (15%), Positives = 90/300 (30%), Gaps = 55/300 (18%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPS---FRDESRRMMRSQ 97
           G   T   LH G+    +  F   +  +  +  +    S+   P+    R  +R ++   
Sbjct: 8   GIRPTG-FLHLGNYFGAVKTFVEMQHKYDCMFFIADWHSLTTSPNPDDIRQSARIILA-- 64

Query: 98  EIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFE 157
             +     I    +S       K    +           Y+++   +G    V       
Sbjct: 65  --EYLACGIDPSLASIYIQSDVKETLELY---------LYLNMNMYLGELERVTTFKEKA 113

Query: 158 SVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK 217
                 K+  +++     Y  L A D ++  +     +   G DQ  N+        R  
Sbjct: 114 R-----KQPNNVNAGLLTYPTLMAADILQ-HRAQKVPV---GKDQEQNMEMARKCARRFN 164

Query: 218 ---------TPKLFALTSPLL--TTASGT-KMGKTLSGAIWL-NKEMTSPYNFWQYWR-- 262
                     P+ +  +   +      G+ KMGK+    I+L + + T      +     
Sbjct: 165 HIYNTDFFPEPQNYYFSHEAVKVPGLDGSGKMGKSEGNCIYLHDDDKTISKKVMRAVTDN 224

Query: 263 -----NIDDADVVSFAKRLTTL---PMSEIDRMAKLQGKE----INEAKKIIATEITTMV 310
                N    +V+      T L      E  R    +  +      + KK IA +I   V
Sbjct: 225 GPQTPNSPRPEVIE--NLFTFLRICSSDETYRYFDEKWNDCTLRYGDLKKQIAEDIIKTV 282


>gi|307719108|ref|YP_003874640.1| tryptophanyl-tRNA synthetase [Spirochaeta thermophila DSM 6192]
 gi|306532833|gb|ADN02367.1| tryptophanyl-tRNA synthetase [Spirochaeta thermophila DSM 6192]
          Length = 355

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 37/218 (16%), Positives = 74/218 (33%), Gaps = 27/218 (12%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRM-MRSQEIQEN 102
            T   LH GH    +      +  ++   ++     +   P  +D         + + + 
Sbjct: 12  PTGK-LHLGHYVGSLANRVKLQDEYECFFIIADLHMLTTKPEKKDVEAIADNAREMVLDY 70

Query: 103 IEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR 162
           +        S I   +   +   LN         + ++L  +     +  +   E  ++ 
Sbjct: 71  LACGIDPAKSVIYLQSAVPEVYELN--------LFFEMLVTVPRLQRIPTL--KEMAQAA 120

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PK 220
              E  L  L   Y +LQA D + L + +   +   G D   ++    ++  R      +
Sbjct: 121 HLEEMPLGLL--GYPVLQAADIL-LPRAHVVPV---GKDNVPHVELTREIARRFNFLYGE 174

Query: 221 LFALTSPL------LTTASGT-KMGKTLSGAIWLNKEM 251
           +F +  PL      L    G  KM K+L  AI L+ + 
Sbjct: 175 VFPVPDPLVGEVPTLVGIDGAAKMSKSLGNAILLSDDP 212


>gi|291085419|ref|ZP_06353033.2| tryptophan--tRNA ligase [Citrobacter youngae ATCC 29220]
 gi|291070929|gb|EFE09038.1| tryptophan--tRNA ligase [Citrobacter youngae ATCC 29220]
          Length = 373

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 39/252 (15%), Positives = 73/252 (28%), Gaps = 28/252 (11%)

Query: 9   LSILSERGFIHQISNPR-ELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
             I +ER  +H  +     +             G   T   LH GH    +      +  
Sbjct: 16  FQITAERRLLHLKTPFGFAIKESYMNNKTIILTGDRPTGP-LHLGHYVGSLRQRAALQHD 74

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
           ++   L+     +    +     +      E+           ++ I      T   + +
Sbjct: 75  YQQFILVADLQGLT--DNGSTPQKIQNNIPEVLA------DYLAAGID--PSLTTVCLQS 124

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
               L  +  + +     +    N  +  E  +    R   + FL   Y I QA D    
Sbjct: 125 ALPALAELTALYMNIVTVARVERNPTVKNEIAQKGFARSLPVGFL--VYPISQAADITA- 181

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKT----------PKLFALTSPLLTTASGTKM 237
              +   +   G DQ   I    ++  ++ +            L + TS L       KM
Sbjct: 182 ---FKAEVVPVGDDQLPMIEQTNEIVHKMNSLLPTPVLTHCKALLSATSRLPGIDGNAKM 238

Query: 238 GKTLSGAIWLNK 249
            K+L   I L+ 
Sbjct: 239 SKSLGNTILLSA 250


>gi|126433841|ref|YP_001069532.1| tryptophanyl-tRNA synthetase [Mycobacterium sp. JLS]
 gi|126233641|gb|ABN97041.1| tryptophanyl-tRNA synthetase [Mycobacterium sp. JLS]
          Length = 344

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 38/246 (15%), Positives = 84/246 (34%), Gaps = 30/246 (12%)

Query: 35  VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMM 94
               + G   T+ SLH G+    +  +   +  +     +    + I  P          
Sbjct: 12  PRVVFSGVQPTSDSLHLGNALGAVTHWTALQDDYDAYFCVVDLHA-ITVPQ--------- 61

Query: 95  RSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRML 154
             + ++         + +       ++   + ++      + +  +L     F   +RM 
Sbjct: 62  DPETLRYRTLVTAAQYLALG-IDPARSTVFVQSHVPAHTELAW--VLGCFTGFGQASRMT 118

Query: 155 SFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
            F+  +S+ +   + +   F Y +L A D +     YD  L   G DQ  ++    D+ +
Sbjct: 119 QFKD-KSQKQGADATTVGLFTYPVLMAADVLL----YDTDLVPVGEDQRQHLELARDVAQ 173

Query: 215 RLKT--PKLFALTSPLLTTASGT---------KMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
           R     P  F +  P++  A+           KM K+      L   +  P    +  R+
Sbjct: 174 RFNARFPDTFVIPEPMIPKATAKIYDLQDPTAKMSKSAGTDAGLITLLDDPKKTAKKIRS 233

Query: 264 -IDDAD 268
            + D++
Sbjct: 234 AVTDSE 239


>gi|108798183|ref|YP_638380.1| tryptophanyl-tRNA synthetase [Mycobacterium sp. MCS]
 gi|119867279|ref|YP_937231.1| tryptophanyl-tRNA synthetase [Mycobacterium sp. KMS]
 gi|108768602|gb|ABG07324.1| tryptophanyl-tRNA synthetase [Mycobacterium sp. MCS]
 gi|119693368|gb|ABL90441.1| tryptophanyl-tRNA synthetase [Mycobacterium sp. KMS]
          Length = 344

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 38/246 (15%), Positives = 84/246 (34%), Gaps = 30/246 (12%)

Query: 35  VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMM 94
               + G   T+ SLH G+    +  +   +  +     +    + I  P          
Sbjct: 12  PRVVFSGVQPTSDSLHLGNALGAVTHWTALQDDYDAYFCVVDLHA-ITVPQ--------- 61

Query: 95  RSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRML 154
             + ++         + +       ++   + ++      + +  +L     F   +RM 
Sbjct: 62  DPETLRYRTLVTAAQYLALG-IDPARSTVFVQSHVPAHTELAW--VLGCFTGFGQASRMT 118

Query: 155 SFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
            F+  +S+ +   + +   F Y +L A D +     YD  L   G DQ  ++    D+ +
Sbjct: 119 QFKD-KSQKQGADATTVGLFTYPVLMAADVLL----YDTDLVPVGEDQRQHLELARDVAQ 173

Query: 215 RLKT--PKLFALTSPLLTTASGT---------KMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
           R     P  F +  P++  A+           KM K+      L   +  P    +  R+
Sbjct: 174 RFNARFPDTFVIPEPMIPKATAKIYDLQDPTAKMSKSAGTDAGLITLLDDPKKTAKKIRS 233

Query: 264 -IDDAD 268
            + D++
Sbjct: 234 AVTDSE 239


>gi|322688777|ref|YP_004208511.1| hypothetical protein BLIF_0590 [Bifidobacterium longum subsp.
           infantis 157F]
 gi|320460113|dbj|BAJ70733.1| conserved hypothetical protein [Bifidobacterium longum subsp.
           infantis 157F]
          Length = 257

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 8/40 (20%), Positives = 20/40 (50%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           +V +G   S  +A+R +K+  ++++   I+     +K   
Sbjct: 19  LVASGLVESRAKAQRLIKAGHVRVDGETITKPSFMVKAGH 58


>gi|209735494|gb|ACI68616.1| Tyrosyl-tRNA synthetase, cytoplasmic [Salmo salar]
          Length = 237

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 43/235 (18%), Positives = 74/235 (31%), Gaps = 25/235 (10%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R    ++    ++  + ++  +  Y G   T    H  +   +  +    K G +  
Sbjct: 13  LITRNL-QEVLGEEKIKQVLAERELKVYWGTATTGKP-HVAYFVPMSKIADFLKAGCEVT 70

Query: 72  SLMGGGTSII---GDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
            L     + +     P    E R     Q I+  +E I       +K+  G         
Sbjct: 71  ILFADLHAFLDNMKAPWELLELRVQYYEQVIKAMLESIGVPLDK-LKFIKGTDFQ----- 124

Query: 129 ETWLCSIKYIDLLREIGSFFSV--NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
              L     +D+ R + S  +    +    E V+   + +  L      Y  LQA D   
Sbjct: 125 ---LSREYTLDVYR-LSSMVTEHDAKKAGAEVVK---QVDHPL-LSGLLYPGLQALDEEY 176

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
           L        Q GG DQ             L   K   L +P++   +G KM  + 
Sbjct: 177 LK----VDAQFGGVDQRKIFTLAEKYLPSLGYAKRSHLMNPMVPGLTGAKMSSSE 227


>gi|329938092|ref|ZP_08287543.1| tryptophanyl-tRNA synthetase [Streptomyces griseoaurantiacus M045]
 gi|329302581|gb|EGG46471.1| tryptophanyl-tRNA synthetase [Streptomyces griseoaurantiacus M045]
          Length = 339

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 52/297 (17%), Positives = 99/297 (33%), Gaps = 47/297 (15%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSII--GDPSFRDESRRMMRSQE 98
           G   TA S H G+    +  +   +  H    ++    +I    DP+    + R+  +Q 
Sbjct: 13  GIQPTAGSFHLGNYLGAVRQWVALQETHDAFYMVVDLHAITVQQDPAELRANTRLAAAQL 72

Query: 99  IQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
           +   ++  +               A ++N  T     + +   ++  +    +R      
Sbjct: 73  LAAGLDPERCTLFVQSHVPEHAQLAWVMNCLTGYGEAQRMTQFKDKSAKQGADR------ 126

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
                      +   F Y ILQ  D + L + ++  +   G DQ  +I    DL ER   
Sbjct: 127 ----------TTVGLFTYPILQVADIL-LYQAHEVPV---GEDQRQHIELTRDLAERFNG 172

Query: 219 --------PKLFAL--TSPLLTTAS-GTKMGKTLSGAIWLNKEMTSPYNFWQYWRN-IDD 266
                   PK + L  T+ +        KM K+ S    L   +  P    +  ++ + D
Sbjct: 173 RFGETFTVPKAYILKETAKIFDLQDPAIKMSKSASTPKGLINLLDEPKATAKKVKSAVTD 232

Query: 267 AD-VVSF-----------AKRLTTLPMSEIDRMAKL-QGKEINEAKKIIATEITTMV 310
            D V+ +               +TL    I  + +  +GK     K  +A  +   V
Sbjct: 233 TDTVIRYDAEAKPGVSNLLTIYSTLTGEGILALEQRYEGKGYGALKTDLAEVMVDFV 289


>gi|296453816|ref|YP_003660959.1| hemolysin A [Bifidobacterium longum subsp. longum JDM301]
 gi|296183247|gb|ADH00129.1| hemolysin A [Bifidobacterium longum subsp. longum JDM301]
          Length = 257

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 8/40 (20%), Positives = 20/40 (50%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           +V +G   S  +A+R +K+  ++++   I+     +K   
Sbjct: 19  LVASGLVESRAKAQRLIKAGHVRVDGETITKPSFMVKAGH 58


>gi|225874157|ref|YP_002755616.1| tryptophanyl-tRNA synthetase TrpS [Acidobacterium capsulatum ATCC
           51196]
 gi|225792208|gb|ACO32298.1| tryptophanyl-tRNA synthetase TrpS [Acidobacterium capsulatum ATCC
           51196]
          Length = 530

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 35/224 (15%), Positives = 70/224 (31%), Gaps = 32/224 (14%)

Query: 41  GYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESR-RMMRSQE 98
           G   T   LH G+    L     LQ   ++    +    ++  D  + D SR +      
Sbjct: 15  GMRPTGK-LHLGNYMGALANWVRLQ-HEYECYFFIADWHALTTD--YADPSRIKQNTLDV 70

Query: 99  IQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYI-DLLREIGSFFSVNRMLSFE 157
             + +                +    + ++      +  +  +L  +G    V       
Sbjct: 71  ALDWLAAG---------LDPERCTIFIQSHVPQHAELHLLFSMLTPLGWLERVPTYKEQ- 120

Query: 158 SVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK 217
                L  +   ++    Y +LQ+ D + L +     +   G DQ  ++    ++  R  
Sbjct: 121 --MENLTTKDLTTYGFLGYPLLQSADIL-LYQADYVPV---GQDQVAHVELTREVARRFN 174

Query: 218 T--------PKLFALT-SPLLTTASGTKMGKTLSGAIWLNKEMT 252
           +             LT +P L    G KM K+    I L++   
Sbjct: 175 SMYKSSILSEPESLLTPTPKLPGTDGRKMSKSYGNTIGLSESPM 218


>gi|327398861|ref|YP_004339730.1| tryptophanyl-tRNA synthetase [Hippea maritima DSM 10411]
 gi|327181490|gb|AEA33671.1| tryptophanyl-tRNA synthetase [Hippea maritima DSM 10411]
          Length = 334

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 39/228 (17%), Positives = 73/228 (32%), Gaps = 44/228 (19%)

Query: 41  GYDLTASSLHAGHLTQLML--LFWLQKTGHKPISLMGGGTS-IIGDPSFRDESRRMMRSQ 97
           G   T + LH G+L   +   +   +   ++    +    +   G  +  D +   +   
Sbjct: 8   GMRPTGA-LHLGNLYGALKNWVRLQEDDSYERFYFVADWHALTTGFDASEDITENTLNM- 65

Query: 98  EIQENIEKIKGIFSSFIKYGTGKTDAL------MLNNETWLCSI-KYIDLLREIGSFFSV 150
            I      +    ++       K  A       M+    WL  +  Y D + ++G   + 
Sbjct: 66  VIDWLAFGLDPDNNTIFVQSLVKEHAELFLLLSMITPVGWLERVPSYKDQIAQLGKAKTS 125

Query: 151 NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGI 210
           N                        Y +L A D + + K +   +   G DQ  ++    
Sbjct: 126 NYGF-------------------LGYPVLMAAD-IIIYKAHLVPV---GLDQVAHLEFAR 162

Query: 211 DLGERLK---TPKLFALTSPLLT------TASGTKMGKTLSGAIWLNK 249
           +L           +F    PLLT         G KM K+ + AI+L+ 
Sbjct: 163 ELVRHFNHLVKKDVFIEPQPLLTEVPKILGLDGRKMSKSYNNAIYLSD 210


>gi|15827289|ref|NP_301552.1| tryptophanyl-tRNA synthetase [Mycobacterium leprae TN]
 gi|221229767|ref|YP_002503183.1| tryptophanyl-tRNA synthetase [Mycobacterium leprae Br4923]
 gi|2501071|sp|Q49901|SYW_MYCLE RecName: Full=Tryptophanyl-tRNA synthetase; AltName:
           Full=Tryptophan--tRNA ligase; Short=TrpRS
 gi|467165|gb|AAA17323.1| L308_C1_147 [Mycobacterium leprae]
 gi|13092838|emb|CAC30195.1| tryptophanyl tRNA synthetase [Mycobacterium leprae]
 gi|219932874|emb|CAR70780.1| tryptophanyl tRNA synthetase [Mycobacterium leprae Br4923]
          Length = 343

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 43/235 (18%), Positives = 74/235 (31%), Gaps = 45/235 (19%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHK----PISLMGGGTSIIGDPSFRDESRRMMRS 96
           G   T+ SLH G+    +  +   +  H         +    +I          RR + +
Sbjct: 13  GVQPTSDSLHLGNALGAITQWVALQYDHPDEYEAFFCVVDLHAITIAQDPETLWRRTLVT 72

Query: 97  QEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSF 156
                         + ++  G     A++          +   +L     F   +RM  F
Sbjct: 73  A-------------AQYLALGIDPGRAVVFVQSHVPAHTQLAWVLGCFTGFGQASRMTQF 119

Query: 157 ESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL 216
           +    R +   S +   F Y +LQA D +     YD  L   G DQ  ++    DL +R 
Sbjct: 120 KDKALR-QGADSTTVGLFTYPVLQAADVLA----YDTDLVPVGEDQRQHLELARDLAQRF 174

Query: 217 KT-----------------PKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSP 254
            +                  K++ L  P       +KM K+ S    L   +  P
Sbjct: 175 NSRFPDTFVVPDMFIPKMAAKIYDLADPT------SKMSKSASSDAGLINLLDDP 223


>gi|297184803|gb|ADI20913.1| tyrosyl-tRNA synthetase [uncultured gamma proteobacterium
           EB080_L93H08]
          Length = 69

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 27/67 (40%), Gaps = 5/67 (7%)

Query: 97  QEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSF 156
           ++I++N +         +     K    +  N  W+  I     L EI S ++V RML  
Sbjct: 6   EQIKKNAKTYTNQIYKILD----KNKTRVEFNSKWMSKIDTAK-LVEITSNYTVARMLER 60

Query: 157 ESVRSRL 163
           E  + R 
Sbjct: 61  EDFKQRF 67


>gi|297158130|gb|ADI07842.1| tryptophanyl-tRNA synthetase [Streptomyces bingchenggensis BCW-1]
          Length = 337

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 47/297 (15%), Positives = 96/297 (32%), Gaps = 47/297 (15%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSII--GDPSFRDESRRMMRSQE 98
           G   TA S H G+    +  +   +  H    ++    +I    DP+    + R+  +Q 
Sbjct: 11  GIQPTAGSFHLGNYLGAIRQYVALQETHDAFYMVVDLHAITVPQDPAALRANTRLAAAQL 70

Query: 99  IQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
           +   ++  +               A ++N  T       +   ++     +  +     +
Sbjct: 71  LASGLDPDRCTLFIQSHVPEHAQLAWVMNCLTGFGEASRMTQFKD----KTAKQGADRAT 126

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
           V              F Y ILQ  D + L +     +   G DQ  ++    D+ ER   
Sbjct: 127 VGL------------FTYPILQVADIL-LYQANHVPV---GEDQRQHVELTRDIAERFNG 170

Query: 219 --PKLFALTSPLLTTASGT---------KMGKTLSGAIWLNKEMTSPYNFWQYWRN-IDD 266
                F + +P +   +G          KM K+ S    +   +  P    +  ++ + D
Sbjct: 171 RFGDTFTIPAPHIVKETGKIYDLQDPAIKMSKSASTPKGIISLLDEPKVSAKKIKSAVTD 230

Query: 267 AD------------VVSFAKRLTTLPMSEIDRMAKL-QGKEINEAKKIIATEITTMV 310
            +            V +     +TL  + I  + +  +GK     K  +A  +   V
Sbjct: 231 TETEIRYDEEKKPGVSNLLTIYSTLTGTTIADLERKYEGKGYGALKTELAEVLVEWV 287


>gi|227546214|ref|ZP_03976263.1| hemolysin A [Bifidobacterium longum subsp. infantis ATCC 55813]
 gi|239622217|ref|ZP_04665248.1| conserved hypothetical protein [Bifidobacterium longum subsp.
           infantis CCUG 52486]
 gi|312133063|ref|YP_004000402.1| rRNA methylase [Bifidobacterium longum subsp. longum BBMN68]
 gi|317481833|ref|ZP_07940861.1| hemolysin TlyA family protein [Bifidobacterium sp. 12_1_47BFAA]
 gi|322690767|ref|YP_004220337.1| hypothetical protein BLLJ_0577 [Bifidobacterium longum subsp.
           longum JCM 1217]
 gi|227213195|gb|EEI81067.1| hemolysin A [Bifidobacterium longum subsp. infantis ATCC 55813]
 gi|239514214|gb|EEQ54081.1| conserved hypothetical protein [Bifidobacterium longum subsp.
           infantis CCUG 52486]
 gi|291517152|emb|CBK70768.1| hemolysin TlyA family protein [Bifidobacterium longum subsp. longum
           F8]
 gi|311774055|gb|ADQ03543.1| Putative rRNA methylase [Bifidobacterium longum subsp. longum
           BBMN68]
 gi|316916770|gb|EFV38164.1| hemolysin TlyA family protein [Bifidobacterium sp. 12_1_47BFAA]
 gi|320455623|dbj|BAJ66245.1| conserved hypothetical protein [Bifidobacterium longum subsp.
           longum JCM 1217]
          Length = 257

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 8/40 (20%), Positives = 20/40 (50%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           +V +G   S  +A+R +K+  ++++   I+     +K   
Sbjct: 19  LVASGLVESRAKAQRLIKAGHVRVDGETITKPSFMVKAGH 58


>gi|46191091|ref|ZP_00206673.1| COG1189: Predicted rRNA methylase [Bifidobacterium longum DJO10A]
 gi|189439661|ref|YP_001954742.1| putative rRNA methylase [Bifidobacterium longum DJO10A]
 gi|189428096|gb|ACD98244.1| Putative rRNA methylase [Bifidobacterium longum DJO10A]
          Length = 257

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 8/40 (20%), Positives = 20/40 (50%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           +V +G   S  +A+R +K+  ++++   I+     +K   
Sbjct: 19  LVASGLVESRAKAQRLIKAGHVRVDGETITKPSFMVKAGH 58


>gi|20093836|ref|NP_613683.1| RNA-binding protein [Methanopyrus kandleri AV19]
 gi|19886762|gb|AAM01613.1| Predicted RNA-binding protein containing the S4 domain
           [Methanopyrus kandleri AV19]
          Length = 79

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 11/58 (18%), Positives = 23/58 (39%)

Query: 349 GMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
           G  L   +   G A S  EA+R ++S  +++N  ++      +   D      + +  
Sbjct: 4   GRRLDAFLRDVGLAESRREAKRLVESGRVRVNGKLVRKPWWLVSPGDEIEVDGVTVRV 61


>gi|153951987|ref|YP_001398569.1| tryptophanyl-tRNA synthetase [Campylobacter jejuni subsp. doylei
           269.97]
 gi|152939433|gb|ABS44174.1| tryptophanyl-tRNA synthetase [Campylobacter jejuni subsp. doylei
           269.97]
          Length = 319

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/215 (14%), Positives = 60/215 (27%), Gaps = 32/215 (14%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   +   LH G+    +      +   +    +    ++          +  +      
Sbjct: 6   GIQPSGD-LHIGNYFGAIKQMVDAQEKSQMFIFIANYHAMTSSQDGEKLKQNSL-KAAAA 63

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETW-LCSIKYIDLLREIGSFFSVNRMLSFESV 159
                I    S F      K    +     W L     + LL    S+         + V
Sbjct: 64  FLSLGIDAQKSVFWLQSDVKEVIELY----WILSQFTPMGLLERAHSY--------KDKV 111

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
              L     L    F+Y +L   D +     +D ++   G DQ  ++    D+  ++   
Sbjct: 112 AKGLSASHGL----FSYPVLMTADILL----FDTQVVPVGKDQIQHVEIARDIALKVNNE 163

Query: 220 KLFALTSP---------LLTTASGTKMGKTLSGAI 245
                T P         ++    G KM K+    I
Sbjct: 164 WGEIFTLPEARVNEEVAVVVGTDGAKMSKSYQNTI 198


>gi|194697136|gb|ACF82652.1| unknown [Zea mays]
          Length = 379

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 38/232 (16%), Positives = 82/232 (35%), Gaps = 21/232 (9%)

Query: 15  RGFIHQISNPRELDILCSQGVVTA-YIGYDLTASSLHA--GHLTQLMLLFWLQKTGHKPI 71
           RG   +     EL  L     V   Y G++ +   +H   G + + + +  + + G K  
Sbjct: 41  RGIGEECIQEDELRRLLENKPVPICYDGFEPSGR-MHIAQG-IVKTINVNKMVRAGCKVK 98

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
             +    + + +    D  +     + + E  +         +++     +     +E W
Sbjct: 99  IWIADWFAQLNNKMGGDLKKIQTVGRYMIEIWKAAGMNLD-GVEFLWSSEEINRRAHEYW 157

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
                   ++ +I    +V R++    +  R   +  L+  +  Y  +Q  D   L  + 
Sbjct: 158 P-------IVMDIARKNNVKRIMRCCQIMGR-SDQDDLTAAQIFYPCMQCADIFFLKADI 209

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLLTT-ASGT-KMGKT 240
            C+L   G DQ    +   +  + +K   K   L+  +L     G  KM K+
Sbjct: 210 -CQL---GMDQRKVNVLAREYCDDIKRKNKPIILSHHMLPGFKEGQEKMSKS 257


>gi|149200863|ref|ZP_01877838.1| RNA pseudouridylate synthase family protein [Roseovarius sp.
           TM1035]
 gi|149145196|gb|EDM33222.1| RNA pseudouridylate synthase family protein [Roseovarius sp.
           TM1035]
          Length = 268

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 23/54 (42%), Gaps = 1/54 (1%)

Query: 342 SKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
            + +   G  +  +I +AG A S  EA R ++   + +N   +    L +   D
Sbjct: 6   PEKKPPEGERIAKVIARAGIA-SRREAERLIEEGRVTVNGQKVLRAALNVTPAD 58


>gi|56697819|ref|YP_168190.1| RNA pseudouridylate synthase family protein [Ruegeria pomeroyi
           DSS-3]
 gi|56679556|gb|AAV96222.1| RNA pseudouridylate synthase family protein [Ruegeria pomeroyi
           DSS-3]
          Length = 387

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 11/49 (22%), Positives = 24/49 (48%), Gaps = 1/49 (2%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
             G  +  ++ +AG   S  EA R +++  + +N  +I +  L +  +D
Sbjct: 6   PPGERIAKILSRAG-VASRREAERMIEAGRVAVNGKVIDSPALNVTERD 53


>gi|320458888|dbj|BAJ69509.1| conserved hypothetical protein [Bifidobacterium longum subsp.
           infantis ATCC 15697]
          Length = 257

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 8/40 (20%), Positives = 20/40 (50%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           +V +G   S  +A+R +K+  ++++   I+     +K   
Sbjct: 19  LVASGLVESRAKAQRLIKAGHVRVDGETITKPSFMVKAGH 58


>gi|322419447|ref|YP_004198670.1| tryptophanyl-tRNA synthetase [Geobacter sp. M18]
 gi|320125834|gb|ADW13394.1| tryptophanyl-tRNA synthetase [Geobacter sp. M18]
          Length = 327

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 47/296 (15%), Positives = 89/296 (30%), Gaps = 54/296 (18%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQ-KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           G   T   LH GH   ++   W++ +   +         S+  + +  D  +  +    +
Sbjct: 9   GMRPTGK-LHLGHYHGVLS-NWMELQRNFECFFFAADWHSLTTEYANTDGIKESINEMVL 66

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
                 I    S   +       A                 L  I S  +    L     
Sbjct: 67  DWLAFGIDPEQSVIFEQSRVPQHAE----------------LNLILSMITPVSWLERNPT 110

Query: 160 RSRLKRE---QSLSFLEFN-YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER 215
              ++     + LS   F  Y +L A D + + K     +   G DQ  ++    ++  R
Sbjct: 111 YKEMQENLTTKDLSTFGFLGYPVLMASD-IIVYKASRVPV---GQDQIPHLEITREIARR 166

Query: 216 LK-------TPKLFALT-SPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDA 267
                          LT +P +    G KM K+   AI+L+ +        +   ++   
Sbjct: 167 FNYLYGEVFPEPAALLTETPKVLGIDGRKMSKSYGNAIFLSDDAEETR---KKVMSMVTD 223

Query: 268 DVVSFAKR---------LTTLPM-------SEIDRMAKLQGKEINEAKKIIATEIT 307
            +  F K           T   +       +EI +  +       + KKI+A  + 
Sbjct: 224 TLRPFKKDPGEPDRCVAFTLHSLYVDPDKRAEIVQGCRSAQLGCVDCKKILAQAMI 279


>gi|300775302|ref|ZP_07085164.1| tryptophan--tRNA ligase [Chryseobacterium gleum ATCC 35910]
 gi|300506042|gb|EFK37178.1| tryptophan--tRNA ligase [Chryseobacterium gleum ATCC 35910]
          Length = 322

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 34/221 (15%), Positives = 70/221 (31%), Gaps = 33/221 (14%)

Query: 50  HAGHLTQLML--LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIK 107
           H G+L   ++  +   ++ G++    +    ++        ++ R    +     +    
Sbjct: 15  HLGNLLGAIIPAIELSKQEGNESFLFIANLHTLTQIKD--AQTLRQNTYEIAAAWLACGL 72

Query: 108 GIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ 167
               ++    +   +   L   +W            +  FF   R+    S + +  R Q
Sbjct: 73  DTEKTYFYRQSDIAETCEL---SW-----------HLSCFFPYQRLTLAHSFKDKADRLQ 118

Query: 168 SLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSP 227
            ++   F Y IL A D +     YD  +   G DQ  ++    D+  R        L  P
Sbjct: 119 DVNAGLFTYPILMAADILL----YDAEIVPVGKDQLQHLEFARDVASRFNNQMGEILVLP 174

Query: 228 ---------LLTTASGTKMGKTLSG--AIWLNKEMTSPYNF 257
                     +    G KM K+      I+L ++       
Sbjct: 175 QSELQEDTKYVPGTDGQKMSKSRGNIINIFLPEKELKKQVM 215


>gi|288818364|ref|YP_003432712.1| tryptophanyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
 gi|288787764|dbj|BAI69511.1| tryptophanyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
 gi|308751957|gb|ADO45440.1| tryptophanyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
          Length = 394

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 36/185 (19%), Positives = 61/185 (32%), Gaps = 28/185 (15%)

Query: 140 LLREIGSFFSVNRMLSFESVRSR-LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMG 198
            +R +   +  + +L   +V  R      +  FL   Y +LQA D + + K     +   
Sbjct: 162 FIRAVFEGYMESDVLKELNVSKRDFYDTDTYGFL--GYPVLQAVDIL-IYKASAVPV--- 215

Query: 199 GSDQWGNIICGIDLGERLKT-------PKLFALT-SPLLTTASGTKMGKTLSGAIWLNKE 250
           G DQ  +I    ++  R               LT +P L    G KM K+ + AI+    
Sbjct: 216 GEDQLPHIELTREIARRFNHLYGETFPEPQAILTETPKLVGIDGRKMSKSYNNAIYFADT 275

Query: 251 MTSPYNFWQYWRNIDDAD------------VVSFAKRLT-TLPMSEIDRMAKLQGKEINE 297
                     +                   V  + K  T    + EI+R  +       E
Sbjct: 276 KEEVQQKVMRFFTDPQKLRKGDPGRPEICPVFMYHKLFTYEEKVYEIERDCRSGKLGCVE 335

Query: 298 AKKII 302
            K+I+
Sbjct: 336 CKRIM 340


>gi|195496460|ref|XP_002095700.1| GE22552 [Drosophila yakuba]
 gi|194181801|gb|EDW95412.1| GE22552 [Drosophila yakuba]
          Length = 525

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 55/333 (16%), Positives = 97/333 (29%), Gaps = 55/333 (16%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R    +     +L  + ++  +  Y G   T    H  +   +  +    K G +  
Sbjct: 12  LITRNL-QETLGDDKLTKILAERDLKIYWGTATTGKP-HVAYFVPMSKIADFLKAGCEVT 69

Query: 72  SLMGGGTSII---GDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
            L     + +     P    E R     Q I+  +  I       +K+  G         
Sbjct: 70  ILFADLHAYLDNMKAPWSLLELRTQYYEQVIKAMLSSIGVPLEK-LKFVKGSDYQ----- 123

Query: 129 ETWLCSIKYIDLLREIGSFFSV-NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
              L     +D+ +          +    E V+   + E  L      Y  LQA D   L
Sbjct: 124 ---LSKEYTLDVYKLSSVVTQHDAKKAGAEVVK---QVEYPL-LSGLLYPGLQALDEEYL 176

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
                   Q GG DQ            +L   K     +P++   +G KM  +   +   
Sbjct: 177 K----VDAQFGGVDQRKIFTFSEKYLPQLGYEKRIHFMNPMVPGLAGGKMSSSEEDS--K 230

Query: 248 NKEMTSPYNFWQYWR-------NIDDADVVSFAK-----------------------RLT 277
              + SP N  +  +       NI D  ++SF K                        +T
Sbjct: 231 IDLLDSPANVKKKLKKAFCEPGNIADNGLLSFVKHVLFSLFKEGEGFEVNREAEHGGDVT 290

Query: 278 TLPMSEIDRMAKLQGKEINEAKKIIATEITTMV 310
            L   E+++          + K  +   I  ++
Sbjct: 291 FLKYEELEKYYAEDKLHPGDLKATVEKYINRLL 323


>gi|322488781|emb|CBZ24028.1| putative tryptophanyl-tRNA synthetase [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 396

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/91 (24%), Positives = 33/91 (36%), Gaps = 1/91 (1%)

Query: 15  RGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +    LD          Y G   ++ S+H GHL   M   WLQ T H P+ +
Sbjct: 56  RGIFFSHRDLNLILDAYEKGQPFYLYTGRGPSSESMHVGHLIPFMFTKWLQDTFHVPLVI 115

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIE 104
                       F  E    M ++ +++ I 
Sbjct: 116 QLTDDEKFFFKDFTMEEIDKMTTENLKDIIA 146


>gi|227544741|ref|ZP_03974790.1| tryptophanyl-tRNA synthetase II [Lactobacillus reuteri CF48-3A]
 gi|300909013|ref|ZP_07126476.1| tryptophan--tRNA ligase [Lactobacillus reuteri SD2112]
 gi|227185281|gb|EEI65352.1| tryptophanyl-tRNA synthetase II [Lactobacillus reuteri CF48-3A]
 gi|300894420|gb|EFK87778.1| tryptophan--tRNA ligase [Lactobacillus reuteri SD2112]
          Length = 340

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 37/225 (16%), Positives = 72/225 (32%), Gaps = 33/225 (14%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     LQ TG +    ++    ++  +    ++ RR +    +  
Sbjct: 14  PTGK-LHIGHYVGSLKNRVELQNTGKYDTFIMIADQQALTDNARDPEKIRRSLHEVALDY 72

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIG-SFFSVNRMLSFESVR 160
               I             K+  L+ +    L  +  +  L  +  +    N  +  E  +
Sbjct: 73  LAVGI----------DPKKSTILVQSQIPALSELT-MHYLNLVTVARLRRNPTVKTEIKQ 121

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP- 219
            +        F  F Y + QA D      +    + +G  DQ   +    ++        
Sbjct: 122 KKFGESVPAGF--FTYPVSQAADITAFKAD---TVPVG-DDQEPMLEQTREIVRTFNRIY 175

Query: 220 KLFALTSP----------LLTTASGT-KMGKTLSGAIWLNKEMTS 253
           +   L  P           +    G  KM K+L  AI+L+ +  +
Sbjct: 176 QQDILVEPEGVFPPKGQGRIPGLDGNAKMSKSLGNAIYLSDDADT 220


>gi|71023529|ref|XP_761994.1| hypothetical protein UM05847.1 [Ustilago maydis 521]
 gi|46101559|gb|EAK86792.1| hypothetical protein UM05847.1 [Ustilago maydis 521]
          Length = 477

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 34/205 (16%), Positives = 66/205 (32%), Gaps = 18/205 (8%)

Query: 32  SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESR 91
            +  ++AY G   T    H G+L  L  +    + G +   L+    + + +        
Sbjct: 36  DERPLSAYWGTAPTGRP-HVGYLVPLTKIADFLRAGVQVKILLADIHAFLDNLKA----- 89

Query: 92  RMMRSQEIQENIEKIKGIFSSFIKYGTGKTD--ALMLNNETWLCSIKYIDLLREIGSFFS 149
                + ++  +   + + ++  K     TD    ++ +   L     +D  R   S   
Sbjct: 90  ---PIELVRHRVNYYRHVLTAVFKAIGVPTDRLVFVVGSSYQLTEAYNMDNYRLCASVTE 146

Query: 150 VNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICG 209
            +   +   V  ++            Y  LQA D   L    D  +Q GG DQ       
Sbjct: 147 HDAKKAGAEVVKQVASPL---LSGLLYPGLQALDEQYL----DVDMQFGGVDQRKIFTFA 199

Query: 210 IDLGERLKTPKLFALTSPLLTTASG 234
                +L   K   L + ++    G
Sbjct: 200 EQYLPKLGYKKRAHLMNAMVPGLKG 224


>gi|198466293|ref|XP_001353958.2| GA20355 [Drosophila pseudoobscura pseudoobscura]
 gi|198150533|gb|EAL29694.2| GA20355 [Drosophila pseudoobscura pseudoobscura]
          Length = 679

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 47/285 (16%), Positives = 82/285 (28%), Gaps = 50/285 (17%)

Query: 4   FKSDFLS----------ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGH 53
           FKS+ L            L   G   Q S    L    S      + G   T  S+H G+
Sbjct: 21  FKSNLLQGSSLQRSARAQLISAGKHQQSSG--HLPEEKSPWPRKIFSGIQPTG-SVHLGN 77

Query: 54  LTQLMLLFWLQKTGHKPISLMGGGTSIIGD-PSFRDESRRMMRSQEIQENIEKIKGIFSS 112
               +   W Q    +        T  I D  S        +  + I      +      
Sbjct: 78  YLGAVR-KWTQLQNSR-----DDVTVCIVDMHSITMPHNPPVLRENIFTMAATLVACG-- 129

Query: 113 FIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR--SRLKREQSLS 170
                  K+   + +       +++ +    + S  +  R+      +  SRL R+  L 
Sbjct: 130 ---IDPAKSTLFVQS-----AVLEHCEFNWILSSMTTTPRLAQLPQFKEKSRLVRDIPLG 181

Query: 171 FLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKLFALTSPL 228
              + Y +LQA D + L K     +   G+DQ  +I     L         + F +   +
Sbjct: 182 L--YVYPVLQAAD-IMLYKATHVPV---GADQLQHIQLAQHLARTFNGRYGEAFPVCHAI 235

Query: 229 LTTASG----------TKMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
           +                KM K+ +           P    +  + 
Sbjct: 236 IEEGDASRVLSLRDPSKKMSKSEANPKATINLCDPPELIMEKIKK 280


>gi|195166549|ref|XP_002024097.1| GL22853 [Drosophila persimilis]
 gi|194107452|gb|EDW29495.1| GL22853 [Drosophila persimilis]
          Length = 679

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 47/285 (16%), Positives = 82/285 (28%), Gaps = 50/285 (17%)

Query: 4   FKSDFLS----------ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGH 53
           FKS+ L            L   G   Q S    L    S      + G   T  S+H G+
Sbjct: 21  FKSNLLQGSSLHRSARAQLISAGKHQQSSG--HLPEEKSPWPRKIFSGIQPTG-SVHLGN 77

Query: 54  LTQLMLLFWLQKTGHKPISLMGGGTSIIGD-PSFRDESRRMMRSQEIQENIEKIKGIFSS 112
               +   W Q    +        T  I D  S        +  + I      +      
Sbjct: 78  YLGAVR-KWTQLQNSR-----DDVTVCIVDMHSITMPHNPPVLRENIFTMAATLVACG-- 129

Query: 113 FIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR--SRLKREQSLS 170
                  K+   + +       +++ +    + S  +  R+      +  SRL R+  L 
Sbjct: 130 ---IDPAKSTLFVQS-----AVLEHCEFNWILSSMTTTPRLAQLPQFKEKSRLVRDIPLG 181

Query: 171 FLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKLFALTSPL 228
              + Y +LQA D + L K     +   G+DQ  +I     L         + F +   +
Sbjct: 182 L--YVYPVLQAAD-IMLYKATHVPV---GADQLQHIQLAQHLARTFNGRYGEAFPVCHAI 235

Query: 229 LTTASG----------TKMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
           +                KM K+ +           P    +  + 
Sbjct: 236 IEEGDASRVLSLRDPSKKMSKSEANPKATINLCDPPELIMEKIKK 280


>gi|328873988|gb|EGG22354.1| tryptophanyl-tRNA synthetase [Dictyostelium fasciculatum]
          Length = 395

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 38/226 (16%), Positives = 78/226 (34%), Gaps = 37/226 (16%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
            ++ SLH GHL   +   +LQ+  + P+ +              ++ + + +   ++E+I
Sbjct: 90  PSSGSLHFGHLVPFIFTKYLQEVFNVPLVI-----------QMTNDEKFLWKDITLEESI 138

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL 163
                     I  G       + +N  ++  +     + +IG   ++N+      V+   
Sbjct: 139 HYTVENVKDIIALGFDIEKTFIFSNLDYIQYLYPN--VVKIGKCVTLNQ------VKGIF 190

Query: 164 KREQSLSFLEFNYMILQAY-----DFVELAKNYD-------CRLQMGGSDQWGNIICGID 211
               S S  +F +  +QA       F  +   Y        C +     DQ        D
Sbjct: 191 GFGDSDSCGKFAFPPIQAAPSFPDSFPHIFGKYGDQIKSIRCLIPC-AIDQDPYFRMTRD 249

Query: 212 LGERLK-TPK--LFALTSPLLTTASGTKMGKTLSG-AIWLNKEMTS 253
           +  RL       + +   P L   + TKM  +    A++L+     
Sbjct: 250 VASRLGYQKPSLIHSKFFPALQGHN-TKMSASDQNSAVYLSDTPQQ 294


>gi|293375831|ref|ZP_06622100.1| tryptophan--tRNA ligase [Turicibacter sanguinis PC909]
 gi|325841032|ref|ZP_08167241.1| tryptophan--tRNA ligase [Turicibacter sp. HGF1]
 gi|292645539|gb|EFF63580.1| tryptophan--tRNA ligase [Turicibacter sanguinis PC909]
 gi|325490098|gb|EGC92441.1| tryptophan--tRNA ligase [Turicibacter sp. HGF1]
          Length = 332

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 52/328 (15%), Positives = 102/328 (31%), Gaps = 58/328 (17%)

Query: 49  LHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKG 108
           L  G+    +  F   +  H+    +    + I  P  R E R+            KIK 
Sbjct: 14  LTIGNYLGALKNFVKLQDEHECFFFIVDQHA-ITVPQDRLELRK------------KIKE 60

Query: 109 IFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLS-FESVRSRLKREQ 167
           + + ++  G     A +          +   +L    S   + RM    +  + +  + Q
Sbjct: 61  LTALYLACGLDPEKATIFVQSEVPAHTQLAWMLTCNTSMGELERMTQFKDKSQKQSAKGQ 120

Query: 168 SLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKLFALT 225
            +    F Y +L A D +     YD      G DQ  ++    DL ER      + F + 
Sbjct: 121 GIGVGLFMYPVLMAADILL----YDVDFVPVGDDQKQHLELTRDLAERFNNRFGETFKIP 176

Query: 226 SPLLTTASG---------TKMGKTLSGAIWLNKEMTSPYNFWQYWRN-IDDAD------- 268
            PL+               KM K+   A         P    +  ++ + D+D       
Sbjct: 177 EPLIAKTGARIMSLQEPTKKMSKSDDNARNFILMTDEPNVIRKKIKSAMTDSDGIIAFDR 236

Query: 269 -----VVSFAKRLTTLPMSEID----------------RMAKLQGKEINEAKKIIATEIT 307
                + +  +  +T+    ID                 +A++   E+   ++ +   + 
Sbjct: 237 ENKPGISNLLEIYSTITGESIDSLVARYDGAGYGTFKSDLAEVVVAELEPIQQRMKELLN 296

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQH 335
           + +        A  A    F     ++H
Sbjct: 297 SPIIDEVLDRGAERANQLAFKKVKKAEH 324


>gi|218200930|gb|EEC83357.1| hypothetical protein OsI_28763 [Oryza sativa Indica Group]
 gi|222623167|gb|EEE57299.1| hypothetical protein OsJ_07374 [Oryza sativa Japonica Group]
          Length = 380

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 52/326 (15%), Positives = 106/326 (32%), Gaps = 44/326 (13%)

Query: 15  RGFIHQISNPRELDILCSQGVVTA-YIGYDLTASSLHA--GHLTQLMLLFWLQKTGHKPI 71
           RG   +     EL  L  +  V   Y G++ +   +H   G + + + +  + + G K  
Sbjct: 42  RGIGEECIQEDELMNLLQKKPVPICYDGFEPSGR-MHIAQG-IVKTINVNKMVRAGCKVK 99

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
             +    + + +    D  +     + + E            +++     +     NE W
Sbjct: 100 IWIADWFAQLNNKMGGDLKKIQTVGRYMIEIWRAAGMNLD-GVEFLWSSEEINNRANEYW 158

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
                   L+ +I    +V R++    +  R      L+  +  Y  +Q  D   L  + 
Sbjct: 159 P-------LVMDIACKNNVKRIMRCCQIMGR-NDSDELTAAQIFYPCMQCADIFFLKAD- 209

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGT-KMGKTL-SGAIWL- 247
               Q+G   +  N++      +  +  K   L+  +L     G  KM K+  S AI++ 
Sbjct: 210 --ICQLGMDQRKVNVLAREYCTDIKRKNKPIILSHHMLPGFKEGQEKMSKSDPSSAIFME 267

Query: 248 NKEMTSPYNFWQYWR--NIDDA---------DVVSFAKRL------------TTLPMSEI 284
           + E        Q +   N+ D           V  + +              T   M E+
Sbjct: 268 DDEAQVNLKIKQAFCPPNVVDGNPCLEYIKYIVFPWFEMFEVVRKEANGGNKTFTNMDEL 327

Query: 285 DRMAKLQGKEINEAKKIIATEITTMV 310
               K       + K  +A  I  ++
Sbjct: 328 IDDYKTGALHPADVKPALAKAINQIL 353


>gi|195476718|ref|XP_002086217.1| GE22999 [Drosophila yakuba]
 gi|194186007|gb|EDW99618.1| GE22999 [Drosophila yakuba]
          Length = 525

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 55/333 (16%), Positives = 97/333 (29%), Gaps = 55/333 (16%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R    +     +L  + ++  +  Y G   T    H  +   +  +    K G +  
Sbjct: 12  LITRNL-QETLGDDKLTKILAERDLKIYWGTATTGKP-HVAYFVPMSKIADFLKAGCEVT 69

Query: 72  SLMGGGTSII---GDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
            L     + +     P    E R     Q I+  +  I       +K+  G         
Sbjct: 70  ILFADLHAYLDNMKAPWSLLELRTQYYEQVIKAMLSSIGVPLEK-LKFVKGSDYQ----- 123

Query: 129 ETWLCSIKYIDLLREIGSFFSV-NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
              L     +D+ +          +    E V+   + E  L      Y  LQA D   L
Sbjct: 124 ---LSKEYTLDVYKLSSVVTQHDAKKAGAEVVK---QVEYPL-LSGLLYPGLQALDEEYL 176

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
                   Q GG DQ            +L   K     +P++   +G KM  +   +   
Sbjct: 177 K----VDAQFGGVDQRKIFTFSEKYLPQLGYEKRIHFMNPMVPGLAGGKMSSSEEDS--K 230

Query: 248 NKEMTSPYNFWQYWR-------NIDDADVVSFAK-----------------------RLT 277
              + SP N  +  +       NI D  ++SF K                        +T
Sbjct: 231 IDLLDSPANVKKKLKKAFCEPGNIADNGLLSFVKHVLFSLFKEGEGFEVNREAEHGGDVT 290

Query: 278 TLPMSEIDRMAKLQGKEINEAKKIIATEITTMV 310
            L   E+++          + K  +   I  ++
Sbjct: 291 FLKYEELEKYYAEDKLHPGDLKATVEKYINRLL 323


>gi|255690553|ref|ZP_05414228.1| tryptophan--tRNA ligase [Bacteroides finegoldii DSM 17565]
 gi|260624012|gb|EEX46883.1| tryptophan--tRNA ligase [Bacteroides finegoldii DSM 17565]
          Length = 364

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 40/239 (16%), Positives = 71/239 (29%), Gaps = 41/239 (17%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN 102
            T   LH GH    +     LQ  G      +      I D      +  +   +++++N
Sbjct: 13  PTGR-LHIGHYVGSLKRRVELQDAGDYSKMFI-----FIADSQ--ALTDNIDNPEKVRQN 64

Query: 103 IEKIKGIFSSFIKY-----GTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFE 157
           +          + Y        K    + +    LC + +  +     S    N  +  E
Sbjct: 65  V------IEVALDYLACGIDPSKATIFIQSQIPELCELSFYYMDLVSVSRLQRNPTVKAE 118

Query: 158 SVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK 217
                 +    + F  F Y I QA D     +     +   G DQ   +    ++  R  
Sbjct: 119 IQMRNFEASIPVGF--FTYPISQAADITA-FRATTVPV---GEDQEPMLEQAREIVRRFN 172

Query: 218 -------TPKLFALTSPL----LTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNI 264
                        L        L    G  KM K+L   I+L++E   P    +   ++
Sbjct: 173 YIYGETLVEPEILLPDNAACLRLPGTDGKAKMSKSLGNCIYLSEE---PEEIQKKIMSM 228


>gi|237737850|ref|ZP_04568331.1| tryptophanyl-tRNA synthetase [Fusobacterium mortiferum ATCC 9817]
 gi|229419730|gb|EEO34777.1| tryptophanyl-tRNA synthetase [Fusobacterium mortiferum ATCC 9817]
          Length = 330

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 49/344 (14%), Positives = 96/344 (27%), Gaps = 62/344 (18%)

Query: 41  GYDLTASSLHAGHLTQLMLLFW-LQKTG-HKPISLMGGG---TSIIGDPSFRDESRRMMR 95
           G   +   LH G+    M  F   Q +G +     +      TS+    S +D +  +  
Sbjct: 7   GIQPSGI-LHLGNYFGAMKQFIDAQNSGEYDGFYFIADYHSLTSLTDPKSLKDNTYNI-- 63

Query: 96  SQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLS 155
              +      +    S+            +    +WL S      L E G  +       
Sbjct: 64  --VLDYLALGLDPNKSTIFLQSDVPEHVEL----SWLLSNVTPVGLLERGHSY------- 110

Query: 156 FESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER 215
            + +   +     L      Y +L A D +     YD  +   G DQ  ++    D+  +
Sbjct: 111 KDKIAKGIFPNTGL----LTYPVLMAADILM----YDADVVPVGKDQKQHLEMTRDIAMK 162

Query: 216 LKTP---KLFALTSPL-------LTTASGTKMGKTLSGAI-WLNKEMTSPYNFWQYWRNI 264
                  +LF L  PL       +    G KM K+    I     +            +I
Sbjct: 163 FNQQYGVELFKLPEPLTLDDSAVVPGVDGQKMSKSYGNTINMFASKKDLKKQI----MSI 218

Query: 265 ------------DDADVVSFAKRLTTLPMS-EIDRMAKLQGKEINEAKKIIATEITTMV- 310
                        D ++        ++    E+             AK  +   +     
Sbjct: 219 VTDSTPLEEPKNPDNNIAKLYALFASIEKQNEMKEKFLAGNYGYGHAKTELLNAVLEYFG 278

Query: 311 ----HGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGM 350
                  + A+         F+    ++ +    + K + + G+
Sbjct: 279 EARERREKLAQDMNYIHDVLFEGGKKARAIAQKKVMKAKEAVGI 322


>gi|297201889|ref|ZP_06919286.1| tryptophanyl-tRNA synthetase [Streptomyces sviceus ATCC 29083]
 gi|197712738|gb|EDY56772.1| tryptophanyl-tRNA synthetase [Streptomyces sviceus ATCC 29083]
          Length = 337

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 53/297 (17%), Positives = 98/297 (32%), Gaps = 47/297 (15%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSII--GDPSFRDESRRMMRSQE 98
           G   TA S H G+    +  +   +  H    ++    +I    DP     + R+  +Q 
Sbjct: 11  GIQPTAGSFHLGNYLGAVRQWVALQESHDAFYMVVDLHAITVPQDPKELTANTRLAAAQL 70

Query: 99  IQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
           +   ++  +               A ++N  T                    +RM  F+ 
Sbjct: 71  LAAGLDPERCTLFVQSHVPEHAQLAWVMNCLTGFGE---------------ASRMTQFKD 115

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
             +R +   S S   F Y ILQ  D + L +  +  +   G DQ  ++    DL  R   
Sbjct: 116 KSAR-QGADSASVGLFTYPILQVADIL-LYQANEVPV---GEDQRQHVELTRDLATRFNG 170

Query: 219 --PKLFALTSPLLTTASGT---------KMGKTLSGAIWLNKEMTSPYNFWQYWRN-IDD 266
              + F +  P +   +           KM K+ S    L   +  P    +  ++ + D
Sbjct: 171 RFGETFTIPKPYILKETAKIYDLQDPSIKMSKSASTPKGLINLLDEPKATAKKVKSAVTD 230

Query: 267 AD-VVSF-----------AKRLTTLPMSEIDRMAKL-QGKEINEAKKIIATEITTMV 310
            D V+ +               +TL  + I  + +  +GK     K  +A  +   V
Sbjct: 231 TDTVIRYDVENKPGVSNLLTIYSTLTGTGIPELEQQYEGKLYGALKTDLAEVVVEFV 287


>gi|222111941|ref|YP_002554205.1| tryptophanyl-tRNA synthetase [Acidovorax ebreus TPSY]
 gi|221731385|gb|ACM34205.1| tryptophanyl-tRNA synthetase [Acidovorax ebreus TPSY]
          Length = 434

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 33/227 (14%), Positives = 64/227 (28%), Gaps = 28/227 (12%)

Query: 34  GVVTAYIGYDLTASSLHAGHLTQLML--LFWLQKTGHKPISLMGGGTSIIGDPSFRDESR 91
             +    G   + +  H G+    +   +   +  G +    +    ++I         R
Sbjct: 3   KTIRFLTGITPSGTP-HLGNFVGSIRPSVAASRNAGVESFYFLADYHALIKCQEPERVHR 61

Query: 92  RMMRSQEIQEN--IEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFS 149
             +   EI  +     +     +F +         +     WL  +  +     +    +
Sbjct: 62  STL---EIAASWLAAGLDPQQVTFYRQSDIPEIPEL----HWL--LTCVTGKGLLNRAHA 112

Query: 150 VNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICG 209
                       R   +  +S   F Y +L A D + +   +   +   G DQ  +I   
Sbjct: 113 YKAAQDKNQEAGR-DLDDGVSAGLFMYPVLMAADIL-MFNAHKVPV---GRDQIQHIEMA 167

Query: 210 IDLGERLKTPKLFALTSP---------LLTTASGTKMGKTLSGAIWL 247
            D+            T P         LL    G KM K+    I L
Sbjct: 168 RDMAASFNHLYGEHFTLPEAAVEDNVALLLGLDGRKMSKSYDNTIPL 214


>gi|187917888|ref|YP_001883451.1| tryptophanyl-tRNA synthetase [Borrelia hermsii DAH]
 gi|119860736|gb|AAX16531.1| tryptophanyl-tRNA synthetase [Borrelia hermsii DAH]
          Length = 352

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 36/217 (16%), Positives = 69/217 (31%), Gaps = 26/217 (11%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
            T  SLH GH    ++     +  ++   ++    ++   P  +  S   +  +E+  + 
Sbjct: 12  PTG-SLHLGHYVGSIVNRLKYQEEYETYIIIADLHTLTTKPDLKSISEIPVNVREMVLDY 70

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL 163
                       Y       L+  N      +  I ++  +    S+  M     +    
Sbjct: 71  LACGINPEKVNIYLQSAIPELLELNLI----LSMIVMVNRLQRIPSIKDMSVAAGL---- 122

Query: 164 KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK------ 217
             E     L   Y +L + D +    N    L   G D   ++    +L  +        
Sbjct: 123 -SEVPYGLL--GYPVLMSSDILMAKAN----LVPVGRDNEAHVELTRELARKFNYLYGEN 175

Query: 218 ---TPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKE 250
               P+     S  L    G  KM K+L  AI+L+ +
Sbjct: 176 FFPIPEAIFTDSQALVGIDGKAKMSKSLGNAIFLSDD 212


>gi|121595734|ref|YP_987630.1| tryptophanyl-tRNA synthetase [Acidovorax sp. JS42]
 gi|120607814|gb|ABM43554.1| tryptophanyl-tRNA synthetase [Acidovorax sp. JS42]
          Length = 434

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 33/227 (14%), Positives = 64/227 (28%), Gaps = 28/227 (12%)

Query: 34  GVVTAYIGYDLTASSLHAGHLTQLML--LFWLQKTGHKPISLMGGGTSIIGDPSFRDESR 91
             +    G   + +  H G+    +   +   +  G +    +    ++I         R
Sbjct: 3   KTIRFLTGITPSGTP-HLGNFVGSIRPSVAASRNAGVESFYFLADYHALIKCQEPERVHR 61

Query: 92  RMMRSQEIQEN--IEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFS 149
             +   EI  +     +     +F +         +     WL  +  +     +    +
Sbjct: 62  STL---EIAASWLAAGLDPQQVTFYRQSDIPEIPEL----HWL--LTCVTGKGLLNRAHA 112

Query: 150 VNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICG 209
                       R   +  +S   F Y +L A D + +   +   +   G DQ  +I   
Sbjct: 113 YKAAQDKNQEAGR-DLDDGVSAGLFMYPVLMAADIL-MFNAHKVPV---GRDQIQHIEMA 167

Query: 210 IDLGERLKTPKLFALTSP---------LLTTASGTKMGKTLSGAIWL 247
            D+            T P         LL    G KM K+    I L
Sbjct: 168 RDMAASFNHLYGEHFTLPEAAVEDNVALLLGLDGRKMSKSYDNTIPL 214


>gi|311279813|ref|YP_003942044.1| tryptophanyl-tRNA synthetase [Enterobacter cloacae SCF1]
 gi|308749008|gb|ADO48760.1| tryptophanyl-tRNA synthetase [Enterobacter cloacae SCF1]
          Length = 339

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 38/216 (17%), Positives = 69/216 (31%), Gaps = 27/216 (12%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
            T   LH GH    +      +  H    L+     +       D   +    + +   +
Sbjct: 17  PTGP-LHLGHYVGSLRQRVALQHQHPQYILIADLQGL------TDNGSQP--EKVVNNIL 67

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL 163
           E +    +  I+     +   + +    L  +  + +     S    N  +  E ++   
Sbjct: 68  EVMADYLAVGIRPDL--STICLQSALPALAELTMLYMNIVTVSRVERNPTVKNEILQKGF 125

Query: 164 KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK--TPKL 221
            R     FL   Y I QA D       +       G DQ   I    ++  ++   T + 
Sbjct: 126 SRSLPTGFL--VYPISQAADITA----FGADRVPVGDDQLPMIEQTNEIVHKMNALTGEQ 179

Query: 222 F-----ALTSPL--LTTASGT-KMGKTLSGAIWLNK 249
                 A+ SP+  L    G  KM K+L  A+ L+ 
Sbjct: 180 TLRRCEAVLSPMGRLPGVDGNAKMSKSLGNALSLSA 215


>gi|170107171|ref|XP_001884796.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164640358|gb|EDR04624.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 383

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 34/230 (14%), Positives = 73/230 (31%), Gaps = 19/230 (8%)

Query: 18  IHQISNPRELDILCSQGV-VTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGG 76
           + ++     +  + ++G     Y G   T    H G+   L  +      G     L+  
Sbjct: 15  LQEVLGGDSIKAILAEGRHPKCYWGTAPTGRP-HIGYFVPLTKIADFLNAGVHVTILLAD 73

Query: 77  GTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSS-FIKYGTGKTDALMLNNETW-LCS 134
             + +      D  +  +  + ++   +  + + ++ F   G   +    +   ++ L  
Sbjct: 74  VHAFL------DNLKAPL--ELVEHRTQYYQRLLTTVFTSLGIPTSKLKFVQGSSYQLTK 125

Query: 135 IKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCR 194
              +D  +        +   +   V  +++           Y  LQA D   L    D  
Sbjct: 126 EYNLDNYKLCAIVSEHDAKKAGAEVVKQVESPL---LSGLLYPGLQALDEQYL----DVD 178

Query: 195 LQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
            Q GG DQ            RL   K   L + ++   +G KM  +   +
Sbjct: 179 FQFGGVDQRKIFTFAELYLPRLGYAKRAHLMNTMVPGLAGGKMSASDPNS 228


>gi|148543441|ref|YP_001270811.1| tryptophanyl-tRNA synthetase II [Lactobacillus reuteri DSM 20016]
 gi|184152849|ref|YP_001841190.1| tryptophanyl-tRNA synthetase II [Lactobacillus reuteri JCM 1112]
 gi|227363590|ref|ZP_03847707.1| tryptophanyl-tRNA synthetase II [Lactobacillus reuteri MM2-3]
 gi|325681784|ref|ZP_08161303.1| tryptophan--tRNA ligase [Lactobacillus reuteri MM4-1A]
 gi|148530475|gb|ABQ82474.1| tryptophanyl-tRNA synthetase [Lactobacillus reuteri DSM 20016]
 gi|183224193|dbj|BAG24710.1| tryptophanyl-tRNA synthase [Lactobacillus reuteri JCM 1112]
 gi|227071386|gb|EEI09692.1| tryptophanyl-tRNA synthetase II [Lactobacillus reuteri MM2-3]
 gi|324978875|gb|EGC15823.1| tryptophan--tRNA ligase [Lactobacillus reuteri MM4-1A]
          Length = 340

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 37/225 (16%), Positives = 72/225 (32%), Gaps = 33/225 (14%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     LQ TG +    ++    ++  +    ++ RR +    +  
Sbjct: 14  PTGK-LHIGHYVGSLKNRVELQNTGKYDTFIMIADQQALTDNARDPEKIRRSLHEVALDY 72

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIG-SFFSVNRMLSFESVR 160
               I             K+  L+ +    L  +  +  L  +  +    N  +  E  +
Sbjct: 73  LAVGI----------DPKKSTILVQSQIPALSELT-MHYLNLVTVARLRRNPTVKTEIKQ 121

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP- 219
            +        F  F Y + QA D      +    + +G  DQ   +    ++        
Sbjct: 122 KKFGESVPAGF--FTYPVSQAADITAFKAD---TVPVG-DDQEPMLEQTREIVRTFNRIY 175

Query: 220 KLFALTSP----------LLTTASGT-KMGKTLSGAIWLNKEMTS 253
           +   L  P           +    G  KM K+L  AI+L+ +  +
Sbjct: 176 QQDILVEPEGVFPPKGQGRIPGLDGNAKMSKSLGNAIYLSDDADT 220


>gi|224051727|ref|XP_002200606.1| PREDICTED: tryptophanyl-tRNA synthetase [Taeniopygia guttata]
          Length = 473

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 41/253 (16%), Positives = 84/253 (33%), Gaps = 37/253 (14%)

Query: 15  RGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +  + LD   ++     Y G   ++ ++H GHL   +   WLQ+    P+ +
Sbjct: 137 RGIFFSHRDMDQILDAYENKKPFYLYTGRGPSSQAMHVGHLIPFLFTKWLQEVFDVPLVI 196

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                         D+ + + +   +++  E  +      I  G       + ++  +L 
Sbjct: 197 -----------QLTDDEKYLWKDMTVEKAYEYARENAKDIIACGFDINKTFIFSDLDYLG 245

Query: 134 SIKYIDL---LREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA--------Y 182
                     + ++    + N+      V+       S    + ++  +QA         
Sbjct: 246 --TSAGFYKNIVKVQKHVTFNQ------VKGIFGFTDSDCIGKISFPAIQAAPSFSSSFP 297

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTASGTKMGK 239
                 +N  C +     DQ        D+  R+  PK   L ++  P L  A  TKM  
Sbjct: 298 QIFNGKENIQCLIPC-AIDQDPYFRMTRDVAPRIGQPKPALLHSVFFPALQGAQ-TKMSA 355

Query: 240 TLSG-AIWLNKEM 251
           +    +I+L    
Sbjct: 356 SDPNSSIFLTDTA 368


>gi|13097426|gb|AAH03450.1| Tryptophanyl-tRNA synthetase [Mus musculus]
 gi|71059845|emb|CAJ18466.1| Wars [Mus musculus]
          Length = 481

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 40/248 (16%), Positives = 85/248 (34%), Gaps = 31/248 (12%)

Query: 15  RGFIHQISN-PRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +  + LD   ++     Y G   ++ ++H GHL   +   WLQ   + P+ +
Sbjct: 138 RGIFFSHRDMNQILDAYENKKPFYLYTGRGPSSEAMHLGHLVPFIFTKWLQDVFNVPLVI 197

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                         D+ + + +   +++            I  G       + ++  ++ 
Sbjct: 198 -----------QMSDDEKYLWKDLTLEQAYSYTVENAKDIIACGFDINKTFIFSDLEYMG 246

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA-----YDFVELA 188
                   R +     + + ++F  V+       S    + ++  +QA       F ++ 
Sbjct: 247 Q--SPGFYRNV---VKIQKHVTFNQVKGIFGFTDSDCIGKISFPAVQAAPSFSNSFPKIF 301

Query: 189 K---NYDCRLQMGGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTASGTKMGKTLS 242
           +   +  C +     DQ        D+  R+  PK   L +   P L  A  TKM  +  
Sbjct: 302 RDRTDIQCLIPC-AIDQDPYFRMTRDVAPRIGHPKPALLHSTFFPALQGAQ-TKMSASDP 359

Query: 243 G-AIWLNK 249
             +I+L  
Sbjct: 360 NSSIFLTD 367


>gi|188591259|ref|YP_001795859.1| tryptophanyl-tRNA synthetase ii [Cupriavidus taiwanensis LMG 19424]
 gi|170938153|emb|CAP63139.1| Tryptophanyl-tRNA synthetase(Tryptophan--tRNA ligase) (TrpRS)
           [Cupriavidus taiwanensis LMG 19424]
          Length = 345

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 41/221 (18%), Positives = 65/221 (29%), Gaps = 37/221 (16%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
            T   LH GH    +      +  H+   L+    ++  +    D+ RR      + E  
Sbjct: 20  PTGP-LHLGHFVGSLKSRVALQDSHEQYLLLADTQAMTDNAHDPDKVRR-----NVLEVA 73

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR- 162
                +          KT   + ++   L  +  +  L  +            E +++R 
Sbjct: 74  LDYLAVG-----IDPAKTTITVQSHLPALAELTLM-YLNFVTVARLERNPTIKEEIQARG 127

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQ------------WGNIICGI 210
             R+    FL   Y   QA D       +   +   G DQ              N   G 
Sbjct: 128 FGRDIPAGFL--CYPASQAADI----TGFKAEVVPVGEDQAPLIEQTNEIVRRINHQVGR 181

Query: 211 D-LGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNK 249
           D L E       F      L    G  KM K++  AI L  
Sbjct: 182 DVLPECKAMIPQFGR----LPGVDGKAKMSKSMGNAIALGA 218


>gi|89092748|ref|ZP_01165701.1| tryptophanyl-tRNA synthetase [Oceanospirillum sp. MED92]
 gi|89083260|gb|EAR62479.1| tryptophanyl-tRNA synthetase [Oceanospirillum sp. MED92]
          Length = 425

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 37/209 (17%), Positives = 70/209 (33%), Gaps = 22/209 (10%)

Query: 50  HAGHLT-QLMLLFWLQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIK 107
           H G+    +     + ++G +     +    ++I      D  R    ++EI      + 
Sbjct: 17  HIGNYLGAIKPAIEMSQSGEYNNFYFLADYHALI---KCHDPERVAQSTREIAATWLALG 73

Query: 108 GIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ 167
               +       +TD   +   TW+ +      L      +  +   + +S ++ L    
Sbjct: 74  --LDTDKATFYRQTDIPEITELTWILTCMCSKGLMNRAHAYKASVDANRDSGKADLDDGV 131

Query: 168 SLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSP 227
           ++    F+Y IL A D +     ++  L   G DQ  +I    D+  R         T P
Sbjct: 132 TMGL--FSYPILMAADILM----FNADLIPVGKDQIQHIEMARDVAGRFNHTYENLFTLP 185

Query: 228 ---------LLTTASGTKMGKTLSGAIWL 247
                    L+    G KM K+    I L
Sbjct: 186 EAVVDEATQLIPGLDGRKMSKSYDNTIPL 214


>gi|226531027|ref|NP_001148802.1| LOC100282419 [Zea mays]
 gi|195622252|gb|ACG32956.1| tryptophanyl-tRNA synthetase [Zea mays]
          Length = 408

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 57/338 (16%), Positives = 108/338 (31%), Gaps = 57/338 (16%)

Query: 15  RGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +  E LD+  +      Y G   ++ +LH GHL   M   +LQ+    P+ +
Sbjct: 73  RGLFFAHRDLNEILDLYENGQKFYLYTGRGPSSEALHLGHLIPFMFTKYLQEAFKVPLVI 132

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                      +   +  + +  +  ++ I     I  +FI             N     
Sbjct: 133 QLTDDEKYLWKNLTIQESKRLARENAKDIIACGFDIERTFIFSDFSFVGGAFYEN----- 187

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY-----DFVELA 188
                  + ++    ++N+ +        L+        + ++  +QA       F  L 
Sbjct: 188 -------MMQVARCVTMNKAIG--IFGFNLEDH----IRKVSFPPVQAVPSFPSSFPHLF 234

Query: 189 KNYD---CRLQMGGSDQWGNIICGIDLGERLKTPKLFAL---TSPLLTTASGTKMGKTLS 242
              D   C +     DQ        D+  R+   K   +     P L   + TKM  + +
Sbjct: 235 AGKDQLRCLIPC-AIDQDPYFRMTRDVAPRIGYQKPSLIESRFFPALQGEN-TKMSASDA 292

Query: 243 G-AIWLN------KEMTSPY---------NFWQYWRNIDDADV-VSFAKRLTTLPMSEID 285
             AI++       K   + Y          F +      D DV + +      L   +  
Sbjct: 293 NSAIYVTDSAKEIKTKVNKYAFSGGQDSIEFHRKLGANLDVDVPIKYLNF--FLEDDDEL 350

Query: 286 RMAKLQGKEIN----EAKKIIATEITTMV--HGREEAE 317
              K + KE      E K+ +   ++ +V  H R  A+
Sbjct: 351 AHIKKEYKEGRMLTGEVKQRLIAVLSEIVARHQRARAQ 388


>gi|241895829|ref|ZP_04783125.1| tryptophanyl-tRNA synthetase [Weissella paramesenteroides ATCC
           33313]
 gi|241870872|gb|EER74623.1| tryptophanyl-tRNA synthetase [Weissella paramesenteroides ATCC
           33313]
          Length = 339

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 42/230 (18%), Positives = 73/230 (31%), Gaps = 49/230 (21%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     +Q +G + P  ++    +      F D +R     ++IQ 
Sbjct: 13  PTGK-LHIGHYVGSLKNRVDMQNSGQYDPYIMVADKQA------FTDNARNP---EKIQN 62

Query: 102 NIEKIKGIFSSFIKY-----GTGKTDALMLNNETWLCSIKYIDLLREIG-SFFSVNRMLS 155
           ++          + Y        KT   + +    L  +     L  +  +    N  + 
Sbjct: 63  SL------LEVVLDYLAVGIDPAKTTIFVQSAVPELSELTEY-FLNLVSVARVQRNPTVK 115

Query: 156 FESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER 215
            E  +          F  F Y + QA D + L K     +   G DQ   +    +L   
Sbjct: 116 AEIQQKGFGESIPTGF--FIYPVSQAAD-IALFKGQVVPV---GDDQKPMLEQTRELVRT 169

Query: 216 LKTPKLFALTSPL--------------LTTASGT-KMGKTLSGAIWLNKE 250
                 +  T  L              +    G  KM K+L  AI+L+ +
Sbjct: 170 FNR---YYNTDILVEPEGIFPPEGQGRIPGLDGNAKMSKSLGNAIYLSDD 216


>gi|91083743|ref|XP_971153.1| PREDICTED: similar to tyrosyl-tRNA synthetase [Tribolium castaneum]
 gi|270006799|gb|EFA03247.1| hypothetical protein TcasGA2_TC013181 [Tribolium castaneum]
          Length = 521

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 39/235 (16%), Positives = 70/235 (29%), Gaps = 23/235 (9%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            L  R    ++    ++  + SQ  +  Y G   T    H  +   +  +    + G + 
Sbjct: 14  ELITRNL-QEVLGESKIKTILSQRDLKIYWGTATTGKP-HIAYFVPMSKIADFLRAGVEV 71

Query: 71  ISLMGGGTSII---GDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
             L     + +     P      R       I+  ++ I       +++  G        
Sbjct: 72  TILFADLHAYLDNMKAPWELLALRVQYYEHTIKAMLKSIGVPLEK-LRFEKGTNYQ---- 126

Query: 128 NETWLCSIKYIDLLREIGSFFSV-NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
               L     +D+ R          +    E V+   + +  L      Y  LQA D   
Sbjct: 127 ----LSKEYTLDVYRLSSIITEHDAKKAGAEVVK---QVDHPL-VSGLLYPGLQALDEEY 178

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
           L        Q GG DQ            +L   K   L +P++   +G KM  + 
Sbjct: 179 LK----VDAQFGGVDQRKIFTFAEKYLPQLGYQKRAHLMNPMVPGLTGVKMSSSE 229


>gi|261380960|ref|ZP_05985533.1| tryptophan--tRNA ligase [Neisseria subflava NJ9703]
 gi|284796219|gb|EFC51566.1| tryptophan--tRNA ligase [Neisseria subflava NJ9703]
          Length = 336

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 34/209 (16%), Positives = 60/209 (28%), Gaps = 42/209 (20%)

Query: 166 EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALT 225
           +  +    ++Y IL   D + +   ++  +   G DQ  ++    D+  R         T
Sbjct: 128 DHGVEMGLYSYPILMTADIL-MFNAHEVPV---GRDQIQHVEMARDIAGRFNHRFQELFT 183

Query: 226 SP---------LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWR---------NIDDA 267
            P         LL    G KM K+    I L +                         D 
Sbjct: 184 LPEVKIDENVELLVGLDGRKMSKSYGNTIPLWENDKKTQKSVNKIITNMKEPGEPKQPDE 243

Query: 268 D-VVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHG-------------- 312
             +    K  +T   +        +G    EAKK++  +I   +                
Sbjct: 244 SPLFEIYKAFSTPSETAEFTQMLAEGLAWGEAKKLLGAKINAELAEPRERYNELTAKPSQ 303

Query: 313 -----REEAEKAATAAMECFDMSIHSQHM 336
                +  A+KA   A E  D    +  +
Sbjct: 304 IEDILQAGAQKARKEARELLDKVRDAVGI 332


>gi|57237443|ref|YP_178456.1| tryptophanyl-tRNA synthetase [Campylobacter jejuni RM1221]
 gi|86148963|ref|ZP_01067195.1| tryptophanyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           CF93-6]
 gi|88597355|ref|ZP_01100590.1| tryptophanyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           84-25]
 gi|148926479|ref|ZP_01810162.1| tryptophanyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           CG8486]
 gi|218562046|ref|YP_002343825.1| tryptophanyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           NCTC 11168]
 gi|25009452|sp|Q9PIB4|SYW_CAMJE RecName: Full=Tryptophanyl-tRNA synthetase; AltName:
           Full=Tryptophan--tRNA ligase; Short=TrpRS
 gi|73621972|sp|Q5HW79|SYW_CAMJR RecName: Full=Tryptophanyl-tRNA synthetase; AltName:
           Full=Tryptophan--tRNA ligase; Short=TrpRS
 gi|57166247|gb|AAW35026.1| tryptophanyl-tRNA synthetase [Campylobacter jejuni RM1221]
 gi|85840321|gb|EAQ57578.1| tryptophanyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           CF93-6]
 gi|88190416|gb|EAQ94390.1| tryptophanyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           84-25]
 gi|112359752|emb|CAL34538.1| tryptophanyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           NCTC 11168]
 gi|145844642|gb|EDK21748.1| tryptophanyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           CG8486]
 gi|284925659|gb|ADC28011.1| tryptophanyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           IA3902]
 gi|315057811|gb|ADT72140.1| Tryptophanyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           S3]
          Length = 319

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 34/215 (15%), Positives = 61/215 (28%), Gaps = 32/215 (14%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   +   LH G+    +      +   +    +    ++          +  +      
Sbjct: 6   GLQPSGD-LHIGNYFGAIKQMVDAQEKSQMFMFIANYHAMTSSQDGEKLKQNSL-KAAAA 63

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETW-LCSIKYIDLLREIGSFFSVNRMLSFESV 159
                I    S F      K    +     W L     + LL    S+         + V
Sbjct: 64  FLSLGIDPQKSVFWLQSDVKEVMELY----WILSQFTPMGLLERAHSY--------KDKV 111

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
              L     L    F+Y +L A D +     +D R+   G DQ  ++    D+  ++   
Sbjct: 112 AKGLSASHGL----FSYPVLMAADILL----FDTRIVPVGKDQIQHVEIARDIALKVNNE 163

Query: 220 KLFALTSP---------LLTTASGTKMGKTLSGAI 245
                T P         ++    G KM K+    I
Sbjct: 164 WGEIFTLPEARVNEEVAVVVGTDGAKMSKSYQNTI 198


>gi|168702927|ref|ZP_02735204.1| tryptophanyl-tRNA synthetase [Gemmata obscuriglobus UQM 2246]
          Length = 359

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/222 (13%), Positives = 69/222 (31%), Gaps = 27/222 (12%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIG------DPSFRDESRRMM 94
           G   +   LH G+    +     ++   +    +    ++          +      + +
Sbjct: 12  GVQPSGK-LHLGNYFGAIKQHIERQDTGECFYFIADYHALTSLKEAEEKEAGTAAKNKSI 70

Query: 95  RSQEIQEN-IEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRM 153
             +  ++   E ++ +   ++  G     A            +  +L     S F    +
Sbjct: 71  TPRPARQILAENVRDVALDYLALGLDPAKASFFRQSD---VPEVCELAWFFSSVFGTAHL 127

Query: 154 LSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLG 213
               S + ++ R  + S   F Y +L A D + + +++   +   G DQ  ++    D+ 
Sbjct: 128 ERAHSYKDKVARGITPSVGLFTYPLLMAADIL-IYRSHLVPV---GKDQEQHLEMTRDVA 183

Query: 214 ERLKTPKLFALTSPL----------LTTASGTKMGKTLSGAI 245
                   +    PL          +    G KM K+    I
Sbjct: 184 GAFNN--AYGEIFPLPDGVYNEAAVVPGTDGQKMSKSYGNTI 223


>gi|256818802|ref|NP_035840.3| tryptophanyl-tRNA synthetase, cytoplasmic isoform 1 [Mus musculus]
 gi|51704226|sp|P32921|SYWC_MOUSE RecName: Full=Tryptophanyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Tryptophan--tRNA ligase; Short=TrpRS; Contains:
           RecName: Full=T1-TrpRS; Contains: RecName: Full=T2-TrpRS
          Length = 481

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 40/248 (16%), Positives = 85/248 (34%), Gaps = 31/248 (12%)

Query: 15  RGFIHQISN-PRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +  + LD   ++     Y G   ++ ++H GHL   +   WLQ   + P+ +
Sbjct: 138 RGIFFSHRDMNQILDAYENKKPFYLYTGRGPSSEAMHLGHLVPFIFTKWLQDVFNVPLVI 197

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                         D+ + + +   +++            I  G       + ++  ++ 
Sbjct: 198 -----------QMSDDEKYLWKDLTLEQAYSYTVENAKDIIACGFDINKTFIFSDLEYMG 246

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA-----YDFVELA 188
                   R +     + + ++F  V+       S    + ++  +QA       F ++ 
Sbjct: 247 Q--SPGFYRNV---VKIQKHVTFNQVKGIFGFTDSDCIGKISFPAVQAAPSFSNSFPKIF 301

Query: 189 K---NYDCRLQMGGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTASGTKMGKTLS 242
           +   +  C +     DQ        D+  R+  PK   L +   P L  A  TKM  +  
Sbjct: 302 RDRTDIQCLIPC-AIDQDPYFRMTRDVAPRIGHPKPALLHSTFFPALQGAQ-TKMSASDP 359

Query: 243 G-AIWLNK 249
             +I+L  
Sbjct: 360 NSSIFLTD 367


>gi|289615661|emb|CBI57582.1| unnamed protein product [Sordaria macrospora]
          Length = 491

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/140 (17%), Positives = 48/140 (34%), Gaps = 14/140 (10%)

Query: 15  RGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG +    +    LD          Y G   ++ S+H GH        WLQ T   P+ +
Sbjct: 83  RGIVFSHRDLELILDRYEKGEPFFLYTGRGPSSDSVHVGHTIPFEFTKWLQDTFDVPLVI 142

Query: 74  MGGGTSIIGDPSF-RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL 132
           M     +  D  +   + R       I+E            I  G       + ++  ++
Sbjct: 143 M-----MTDDEKYLFSDKR------TIEEVEGYCSNNAKDIIAVGFDPNKTFIFSDFQFM 191

Query: 133 CSIKYIDLLREIGSFFSVNR 152
               Y +++R +    ++N+
Sbjct: 192 GGAFYKNVVR-LSKHITLNQ 210


>gi|195012011|ref|XP_001983430.1| GH15893 [Drosophila grimshawi]
 gi|193896912|gb|EDV95778.1| GH15893 [Drosophila grimshawi]
          Length = 529

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 55/300 (18%), Positives = 91/300 (30%), Gaps = 39/300 (13%)

Query: 10  SILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
             L  R    +     +L  +  +  +  Y G   T    H  +   +  +    K G +
Sbjct: 12  QQLITRNL-QETLGEDKLQKVLQERDLKIYWGTATTGKP-HVAYFVPMSKIADFLKAGCE 69

Query: 70  PISLMGGGTSII---GDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
              L     + +     P    E R     Q I+  +  I       +K+  G       
Sbjct: 70  VTILFADLHAYLDNMKAPWSLLELRTQYYEQVIKAMLSSIGVPLDK-LKFVKGSDYQ--- 125

Query: 127 NNETWLCSIKYIDLLREIGSFFSV--NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF 184
                L     +D+ + + S  ++   +    E V+   + E  L      Y  LQ  D 
Sbjct: 126 -----LSKEYTLDVYK-LSSLVTIHDAKKAGAEVVK---QVEYPL-LSGLLYPGLQGLDE 175

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
             L        Q GG DQ            +L   K     +P++   +G KM  +   +
Sbjct: 176 EYLK----VDAQFGGVDQRKIFTFSEKYLPQLGYEKRIHFMNPMVPGLAGGKMSSSEEDS 231

Query: 245 IWLNKEMTSPYNFWQYWR-------NIDDADVVSFAK-----RLTTLPMSEIDRMAKLQG 292
                 + SP N  +  +       NI D  ++SF K             EI R A   G
Sbjct: 232 --KIDLLDSPANVKKKLKKAFCEPGNIADNGLLSFVKHVLFSLFKDGEGFEIHRAADNGG 289


>gi|325520862|gb|EGC99852.1| tryptophanyl-tRNA synthetase II [Burkholderia sp. TJI49]
          Length = 337

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 53/341 (15%), Positives = 108/341 (31%), Gaps = 50/341 (14%)

Query: 45  TASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIE 104
           T   LH GH    +      +   K   L+    ++       +  RR   ++ + E   
Sbjct: 16  TGP-LHLGHYIGSLRARVQMQHEAKQFLLLADTQALTD-----NMGRRQRVTENVIEVAL 69

Query: 105 KIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-L 163
               +           +  ++ +    L  +    LL  +            E +R R  
Sbjct: 70  DYLAVG-----IDPAISTIVVQSQVPELAELSQY-LLNLVTVARLERNPTIKEEIRLRGF 123

Query: 164 KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP---- 219
           +R+    FL   Y + QA D       +   + +G  DQ   I    +L  R        
Sbjct: 124 ERDIPAGFL--TYPVSQAADITAFKATH---VPVG-DDQLPMIEQTNELVRRFNATVERD 177

Query: 220 -----KLFALTSPLLTTASGT-KMGKTLSGAIWL----NKEMTSPYNFWQ--YWRNIDDA 267
                +        L    G  KM K+L  AI L    ++   +  + +       +DD 
Sbjct: 178 VLVECEAVLSAVTRLPGIDGKAKMSKSLGNAITLGSTPDEIAKAVKDMYTDPNHLRVDDP 237

Query: 268 DVVSFAKRLTTLP--------MSEIDRMAKLQGKEINEAKKIIATEITTMV------HGR 313
             V      T L         + E+    +  G   +  K+++   +  ++         
Sbjct: 238 GQVEGNVVFTFLDAFEPDVQKVDELKAHYRRGGLGDSVVKRVLNERLQALIEPIRTRRRA 297

Query: 314 EEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLT 354
            EA+KA   A+     ++H++ +   +++  + + G+    
Sbjct: 298 FEADKAEVMAI-LRRGTLHAREVAGATLADVKRALGLTYFD 337


>gi|194467617|ref|ZP_03073604.1| tryptophanyl-tRNA synthetase [Lactobacillus reuteri 100-23]
 gi|194454653|gb|EDX43550.1| tryptophanyl-tRNA synthetase [Lactobacillus reuteri 100-23]
          Length = 340

 Score = 48.3 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 37/225 (16%), Positives = 72/225 (32%), Gaps = 33/225 (14%)

Query: 44  LTASSLHAGHLTQLMLLFW-LQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     LQ TG +    ++    ++  +    ++ RR +    +  
Sbjct: 14  PTGK-LHIGHYVGSLKNRIELQNTGKYDTFIMIADQQALTDNARDPEKIRRSLHEVALDY 72

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIG-SFFSVNRMLSFESVR 160
               I             K+  L+ +    L  +  +  L  +  +    N  +  E  +
Sbjct: 73  LAVGI----------DPKKSTILVQSQIPALSELT-MHYLNLVTVARLRRNPTVKTEIKQ 121

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP- 219
            +        F  F Y + QA D      +    + +G  DQ   +    ++        
Sbjct: 122 KKFGESVPAGF--FIYPVSQAADITAFKAD---TVPVG-DDQEPMLEQTREIVRTFNRIY 175

Query: 220 KLFALTSP----------LLTTASGT-KMGKTLSGAIWLNKEMTS 253
           +   L  P           +    G  KM K+L  AI+L+ +  +
Sbjct: 176 QQDILVEPEGVFPPKGQGRIPGLDGNAKMSKSLGNAIYLSDDADT 220


>gi|115488928|ref|NP_001066951.1| Os12g0540900 [Oryza sativa Japonica Group]
 gi|77556651|gb|ABA99447.1| Tryptophanyl-tRNA synthetase, putative, expressed [Oryza sativa
           Japonica Group]
 gi|113649458|dbj|BAF29970.1| Os12g0540900 [Oryza sativa Japonica Group]
 gi|125536912|gb|EAY83400.1| hypothetical protein OsI_38615 [Oryza sativa Indica Group]
          Length = 408

 Score = 48.3 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 59/337 (17%), Positives = 105/337 (31%), Gaps = 57/337 (16%)

Query: 15  RGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +  E+  L  +G     Y G   ++ +LH GHL   M   +LQ     P+ +
Sbjct: 73  RGLFFAHRDLNEILDLYEKGEKFYLYTGRGPSSEALHLGHLIPFMFTKYLQDAFKVPLVI 132

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                      +   E  + +  +  ++ I     +  +FI             N     
Sbjct: 133 QLTDDEKFLWKNLTVEETKRLARENAKDIIACGFDVERTFIFSDFNYVGGAFYEN----- 187

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY-----DFVELA 188
                  + ++    + N+++           E  +  + F    +QA       F  L 
Sbjct: 188 -------MVKVARCVTYNKVVG--IFG--FTPEDHIGKVSF--PPVQAVPSFPSSFPHLF 234

Query: 189 KNYD---CRLQMGGSDQWGNIICGIDLGERLKTPKLFAL---TSPLLTTASGTKMGKTLS 242
              D   C +     DQ        D+  R+   K   +     P L   + TKM  +  
Sbjct: 235 SGNDQLRCLIPC-AIDQDPYFRMTRDVAPRIGYQKPSLIESRFFPALQGEN-TKMSASDP 292

Query: 243 G-AIWLN------KEMTSPYNFWQYWRNID---------DADV-VSFAKRLTTLPMSEID 285
             AI++       K   + Y F     +I+         D DV + +      L      
Sbjct: 293 NSAIYVTDSAKEIKTKVNKYAFSGGRDSIELHRKLGANLDVDVPIKYLNF--FLEDDNEL 350

Query: 286 RMAKLQGKEIN----EAKKIIATEITTMV--HGREEA 316
              K + KE      E K+ +   ++ +V  H R  A
Sbjct: 351 EHIKKEYKEGRMLTGEVKQRLVAVLSELVARHQRARA 387


>gi|195374916|ref|XP_002046249.1| Aats-tyr [Drosophila virilis]
 gi|194153407|gb|EDW68591.1| Aats-tyr [Drosophila virilis]
          Length = 528

 Score = 48.3 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 52/296 (17%), Positives = 91/296 (30%), Gaps = 36/296 (12%)

Query: 2   PAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
               +D    L  R    +     +L+ +  +  +  Y G   T    H  +   +  + 
Sbjct: 4   TTLSADEKKQLITRNL-QETLGEDKLNKVLQERDLKIYWGTATTGKP-HVAYFVPMSKIA 61

Query: 62  WLQKTGHKPISLMGGGTSII---GDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT 118
              K G +   L     + +     P    E R     Q I+  +  I       +K+  
Sbjct: 62  DFLKAGCEVTILFADLHAYLDNMKAPWPLLELRTKYYEQVIKAMLSSIGVPLDK-LKFVK 120

Query: 119 GKTDALMLNNETWLCSIKYIDLLREIGSFFSV--NRMLSFESVRSRLKREQSLSFLEFNY 176
           G            L     +D+ + + S  ++   +    E V+   + E  L      Y
Sbjct: 121 GSDYQ--------LSREYTLDVYK-LSSLVTIHDAKKAGAEVVK---QVEHPL-LSCLLY 167

Query: 177 MILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTK 236
             LQ  D   L        Q GG DQ            +L   K     +P++   +G K
Sbjct: 168 PGLQGLDEEYLK----VDAQFGGVDQRKIFTFSEKYLPQLGYEKRIHFMNPMVPGLAGGK 223

Query: 237 MGKTLSGAIWLNKEMTSPYNFWQYWR-------NIDDADVVSFAK--RLTTLPMSE 283
           M  +   +      + SP N  +  +       NI D  ++SF K    +     E
Sbjct: 224 MSSSEEDS--KIDLLDSPANVKKKLKKAFCEPGNIADNGLLSFIKHVLFSLFKEGE 277


>gi|290558898|gb|EFD92288.1| RNA-binding S4 domain protein [Candidatus Parvarchaeum acidophilus
           ARMAN-5]
          Length = 220

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 15/73 (20%), Positives = 28/73 (38%), Gaps = 9/73 (12%)

Query: 347 SRGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLS 405
             G+ +L  +      A +  EAR  +K+  + ++   +  EK  +   D  S       
Sbjct: 40  KDGVSILGFLRDVLKIAANAREARYLIKNGYVFVDGKKVIEEKYVVGFSDIVSV------ 93

Query: 406 FGKKNHIICHLCG 418
             K N+ +  L G
Sbjct: 94  --KDNYFLVWLSG 104


>gi|326523199|dbj|BAJ88640.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 341

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 19/101 (18%), Positives = 36/101 (35%), Gaps = 1/101 (0%)

Query: 15  RGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +  E+  L  +G     Y G   ++ +LH GHL   M   +LQ     P+ +
Sbjct: 64  RGLFFAHRDFNEILDLYEKGEKFYLYTGRGPSSEALHLGHLVPFMFTKYLQDAFKVPLVI 123

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFI 114
                      +      + +  +  ++ I     +  +FI
Sbjct: 124 QLTDDEKFLWKNLTVNESKRLARENAKDIIACGFDVEKTFI 164


>gi|206896044|ref|YP_002247141.1| tryptophanyl-tRNA synthetase [Coprothermobacter proteolyticus DSM
           5265]
 gi|206738661|gb|ACI17739.1| tryptophanyl-tRNA synthetase [Coprothermobacter proteolyticus DSM
           5265]
          Length = 326

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 33/220 (15%), Positives = 76/220 (34%), Gaps = 31/220 (14%)

Query: 41  GYDLTA-SSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           G   T     H G+L   +  +   +  +     +    ++ G      E R     +  
Sbjct: 10  GIRPTGVP--HLGNLRGALQQWVDLQEKYPCFYFIADWHALFG-----LEERSREIKENT 62

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           ++ +  +  +          K+   + +        +++ L     +   V  +    ++
Sbjct: 63  KKVLATLLAVG-----LDPEKSTIFIQS-----QVPEHLTLFTIFSAITPVGWLERNPTL 112

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT- 218
           +  ++ E+ L +    Y +LQA D + L K     + +G  DQ  ++    ++  R  + 
Sbjct: 113 KDMVRAEEPLPYGLLGYPVLQAADIL-LYK--GTMVPVG-KDQQPHLEISREIARRFNSL 168

Query: 219 --------PKLFALTSPLLTTASGTKMGKTLSGAIWLNKE 250
                   P+      P+L    G KM K+ S  I +  +
Sbjct: 169 FGVEFFPEPQAVLNEYPVLPGTDGRKMSKSYSNVISIEDD 208


>gi|149914092|ref|ZP_01902624.1| RNA pseudouridylate synthase family protein [Roseobacter sp.
           AzwK-3b]
 gi|149812376|gb|EDM72207.1| RNA pseudouridylate synthase family protein [Roseobacter sp.
           AzwK-3b]
          Length = 263

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 26/59 (44%), Gaps = 1/59 (1%)

Query: 348 RGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
           +G  +  +I +AG A S  EA R +++  + +N   I    L +  +D  +     L  
Sbjct: 7   KGDRIAKVIARAGLA-SRREAERMIEAGRVTVNGKKIDRAALNVTDKDRIAVDGRDLRA 64


>gi|27382606|ref|NP_774135.1| hypothetical protein bll7495 [Bradyrhizobium japonicum USDA 110]
 gi|27355778|dbj|BAC52760.1| bll7495 [Bradyrhizobium japonicum USDA 110]
          Length = 696

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 26/77 (33%), Gaps = 7/77 (9%)

Query: 319 AATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIK 378
           A       F+     +  P           G  +   + +AG A S  +A   +    + 
Sbjct: 352 AYRERDRDFEGRPRREDAPKPK------KAGERIAKALARAGLA-SRRDAEEMVTQGRVA 404

Query: 379 INNSIISNEKLQIKLQD 395
           +N  +I++  L I   D
Sbjct: 405 VNGRVINSPALDITPND 421


>gi|308234532|ref|ZP_07665269.1| tryptophanyl-tRNA synthetase [Atopobium vaginae DSM 15829]
 gi|328944129|ref|ZP_08241594.1| tryptophan--tRNA ligase [Atopobium vaginae DSM 15829]
 gi|327492098|gb|EGF23872.1| tryptophan--tRNA ligase [Atopobium vaginae DSM 15829]
          Length = 349

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 34/214 (15%), Positives = 61/214 (28%), Gaps = 31/214 (14%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN 102
            T   LH GH    +     LQ  G     ++                  +      +  
Sbjct: 36  PTGR-LHLGHYFGTLKERVRLQNMGISTNIVIADYQV-------------ITDRDTTEHI 81

Query: 103 IEKIKGIFSSFIKYG-TGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
            + +  +   ++  G       +  ++     +   +  L  +                 
Sbjct: 82  ADNVYNMVIDYLACGIDPDKTMIFTHSAIPAENQLMLPFLSLLTEAEMERNPTVK---AE 138

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--- 218
           +     +L+ L   Y + QA D   L    +      G DQ  +I     +  R      
Sbjct: 139 QEASGHALTGLLLTYPVHQACD--ILFCKGNIV--PVGRDQLPHIEATNKIAHRFNARYG 194

Query: 219 ---PKLFAL--TSPLLTTASGTKMGKTLSGAIWL 247
              P++  L  + PLL    G KM K+   AI L
Sbjct: 195 NVFPEVNGLLTSMPLLPGLDGRKMSKSYGNAISL 228


>gi|261368842|ref|ZP_05981725.1| S4 domain protein [Subdoligranulum variabile DSM 15176]
 gi|282569112|gb|EFB74647.1| S4 domain protein [Subdoligranulum variabile DSM 15176]
          Length = 71

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 9/36 (25%), Positives = 19/36 (52%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIIS 385
           + L  L+  AG   +  EA+  ++  A+K+N  + +
Sbjct: 11  IKLDALLKFAGLCETGGEAKELIQGGAVKVNGEVCT 46


>gi|156742130|ref|YP_001432259.1| tryptophanyl-tRNA synthetase [Roseiflexus castenholzii DSM 13941]
 gi|156233458|gb|ABU58241.1| tryptophanyl-tRNA synthetase [Roseiflexus castenholzii DSM 13941]
          Length = 335

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 45/225 (20%), Positives = 79/225 (35%), Gaps = 31/225 (13%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSIIGDPSFRDESRRM-MRSQEIQE 101
            T   +H GH    +     LQ   ++   L+     +    + R E  R+    + I+ 
Sbjct: 14  PTGR-MHLGHYVGTLANRVRLQDE-YECFFLVADLHML----TTRTELERLRQTGENIRH 67

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYI-DLLREIGSFFSVNRMLSFESVR 160
            +       S  I     K+   + +    +  I  I  +L  +     V  +   + V 
Sbjct: 68  VV---LDNLSVGID--PEKSTYFLQSMVPAISEIALIFGMLTTVPRLQRVPTL---KEVM 119

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT-- 218
             L  EQ  S+    Y +LQA D + +  +    L   G DQ  ++    ++  R  T  
Sbjct: 120 QDLHIEQP-SYGLLGYPVLQAADILCVRAD----LVPVGKDQASHLEVTREIARRFNTLY 174

Query: 219 ------PKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYN 256
                 P+      P L    G  KM K+L  AI+L+ +  +   
Sbjct: 175 GEVLPEPETLIGDVPTLVGIDGQAKMSKSLDNAIYLSDDARTVEE 219


>gi|260592795|ref|ZP_05858253.1| tryptophan--tRNA ligase [Prevotella veroralis F0319]
 gi|260535326|gb|EEX17943.1| tryptophan--tRNA ligase [Prevotella veroralis F0319]
          Length = 362

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 45/300 (15%), Positives = 84/300 (28%), Gaps = 61/300 (20%)

Query: 44  LTASSLHAGHLTQLMLLFW---LQKTG--HKPISLMGGGTSIIGDPSFRDESRRMMRSQE 98
            T   LH GH      L     LQ  G   +    M    ++  +    ++ R+      
Sbjct: 11  PTGK-LHLGHYVG--SLRRRVELQNLGDYDRMFVFMADVQALTDNADNPEKIRQ----NI 63

Query: 99  IQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
           I+  ++ +    S        K    + +    L  +     +  I              
Sbjct: 64  IEVALDYLSAGLS------PEKCTLYIQSQIPELAELTTF-FMNLISVSRVQRNPTVKTE 116

Query: 159 VRSR-LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK 217
           ++ R  +    + F  F Y + QA D           +  G  DQ   I    ++  R  
Sbjct: 117 IKMRNFEANIPMGF--FAYPVSQAADIAAFKA---TTVPAG-EDQEPMIEVTREIVRRFN 170

Query: 218 TPKLFALTSP------------LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYW---- 261
                 L  P            L  T    KM K+L   I+L+ +  + +   +      
Sbjct: 171 QLYAPVLVEPNIMLPENATARRLPGTDGKEKMSKSLGNCIYLSDDADTVWKKVKTMYTDP 230

Query: 262 --RNIDD------ADVVSFAKRLT-----------TLPMSEIDRMAKLQGKEINEAKKII 302
              N+ D        V ++    +              + E+       G    + KK++
Sbjct: 231 THLNVSDPGHVEGNAVFTYLDAFSTDEDFAEFWPEFQNLDELKAAYTAGGIGDMKCKKLL 290


>gi|240127955|ref|ZP_04740616.1| tryptophanyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035]
 gi|268686348|ref|ZP_06153210.1| tryptophanyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035]
 gi|268626632|gb|EEZ59032.1| tryptophanyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035]
          Length = 336

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 37/201 (18%), Positives = 56/201 (27%), Gaps = 42/201 (20%)

Query: 174 FNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSP------ 227
           F+Y IL   D +    N +  +   G DQ  ++    D+  R         T P      
Sbjct: 136 FSYPILMTADILMFNAN-EVPV---GRDQIQHVEMARDIAGRFNHRFQELFTLPEVKIDE 191

Query: 228 ---LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWR---------NIDDAD-VVSFAK 274
              LL    G KM K+    I L +                         D   +    K
Sbjct: 192 NVELLVGLDGRKMSKSYGNTIPLWENDKKTQKSVNKIITNMKEPGEPKQPDESPLFEIYK 251

Query: 275 RLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHG-------------------REE 315
             +T   +         G    EAKK+ A +I   +                     +  
Sbjct: 252 AFSTPSETAEFTQMLADGLAWGEAKKLSAAKINAELAEPRERYNALTSNPSQIEEILQAG 311

Query: 316 AEKAATAAMECFDMSIHSQHM 336
           A+KA   A E  D    +  +
Sbjct: 312 AQKARKEARELLDKVRDAVGI 332


>gi|256818746|ref|NP_001157960.1| tryptophanyl-tRNA synthetase, cytoplasmic isoform 2 [Mus musculus]
 gi|256818806|ref|NP_001157786.1| tryptophanyl-tRNA synthetase, cytoplasmic isoform 2 [Mus musculus]
 gi|12835778|dbj|BAB23357.1| unnamed protein product [Mus musculus]
 gi|74225408|dbj|BAE31627.1| unnamed protein product [Mus musculus]
          Length = 475

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 40/248 (16%), Positives = 85/248 (34%), Gaps = 31/248 (12%)

Query: 15  RGFIHQISN-PRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +  + LD   ++     Y G   ++ ++H GHL   +   WLQ   + P+ +
Sbjct: 138 RGIFFSHRDMNQILDAYENKKPFYLYTGRGPSSEAMHLGHLVPFIFTKWLQDVFNVPLVI 197

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                         D+ + + +   +++            I  G       + ++  ++ 
Sbjct: 198 -----------QMSDDEKYLWKDLTLEQAYSYTVENAKDIIACGFDINKTFIFSDLEYMG 246

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA-----YDFVELA 188
                   R +     + + ++F  V+       S    + ++  +QA       F ++ 
Sbjct: 247 Q--SPGFYRNV---VKIQKHVTFNQVKGIFGFTDSDCIGKISFPAVQAAPSFSNSFPKIF 301

Query: 189 K---NYDCRLQMGGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTASGTKMGKTLS 242
           +   +  C +     DQ        D+  R+  PK   L +   P L  A  TKM  +  
Sbjct: 302 RDRTDIQCLIPC-AIDQDPYFRMTRDVAPRIGHPKPALLHSTFFPALQGAQ-TKMSASDP 359

Query: 243 G-AIWLNK 249
             +I+L  
Sbjct: 360 NSSIFLTD 367


>gi|296328109|ref|ZP_06870642.1| tryptophan--tRNA ligase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 23726]
 gi|296154780|gb|EFG95564.1| tryptophan--tRNA ligase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 23726]
          Length = 325

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 31/215 (14%), Positives = 69/215 (32%), Gaps = 31/215 (14%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   +   LH G+    M  F   +  +     +    S+      + E+ +      + 
Sbjct: 7   GIQPSGI-LHIGNYFGAMKQFVDLQDSYDGFYFIADYHSLTSLT--KAETLKENTYNIVL 63

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           + +          +     K+   + +N      + ++     + +   V  +    S +
Sbjct: 64  DYLA---------VGLDPSKSTIFLQSNVPEHTELTWL-----LSNITPVGLLERGHSYK 109

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP- 219
            ++ +    +     Y +L A D +     YD  +   G DQ  ++    D+  +     
Sbjct: 110 DKIAKGIPSNTGLLTYPVLMAADILI----YDSDVVPVGKDQKQHLEMTRDIAMKFNQQY 165

Query: 220 --KLFALTSPLLT-------TASGTKMGKTLSGAI 245
             + F L  PL+           G KM K+ +  I
Sbjct: 166 GVEFFKLPEPLILDDSAIVPGTDGQKMSKSYNNTI 200


>gi|212531661|ref|XP_002145987.1| tyrosyl-tRNA synthetase, putative [Penicillium marneffei ATCC
           18224]
 gi|210071351|gb|EEA25440.1| tyrosyl-tRNA synthetase, putative [Penicillium marneffei ATCC
           18224]
          Length = 383

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 42/231 (18%), Positives = 86/231 (37%), Gaps = 23/231 (9%)

Query: 15  RGFIHQISNPRELDILCSQGV-VTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           R  + +I NP  ++ + ++G     Y G   T    H G+ T  + +  L   G + + L
Sbjct: 13  RENLDEILNPEIIESILAEGRNPRIYWGTATTGRP-HTGYFTPAIKIAQLLAAGCEVVIL 71

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK---YGTGKTDALMLNNET 130
           +    + +      D  +  +  + ++  ++  + +  + ++     T K + ++ ++  
Sbjct: 72  LADVHAFL------DSMKAPL--ELVENRVKYYERVIRAILEAVGVSTEKLEFVLGSSYQ 123

Query: 131 WLCSIKYIDLLREIGSFFSV-NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
                  +D+ R          R    E V+        LS L   Y ILQ  D   L  
Sbjct: 124 RNSDY-VMDVYRLAALTTEHDARKAGAEIVKQ--SNNAPLSGL--LYPILQVLDEEYLK- 177

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
                 ++GG DQ        +   +L   K   L +P++   +G KM  +
Sbjct: 178 ---VDAELGGVDQRKLFTAATEWLPKLGYRKRAHLVTPMVAGLNGGKMSSS 225


>gi|205355962|ref|ZP_03222730.1| tryptophanyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           CG8421]
 gi|205346086|gb|EDZ32721.1| tryptophanyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           CG8421]
          Length = 319

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 34/215 (15%), Positives = 61/215 (28%), Gaps = 32/215 (14%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   +   LH G+    +      +   +    +    ++          +  +      
Sbjct: 6   GLQPSGD-LHIGNYFGAIKQMVDAQEKSQMFMFIANYHAMTSSQDGEKLKQNSL-KAAAA 63

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETW-LCSIKYIDLLREIGSFFSVNRMLSFESV 159
                I    S F      K    +     W L     + LL    S+         + V
Sbjct: 64  FLSLGIDPQKSVFWLQSDVKEVMELY----WILSQFTPMGLLERAHSY--------KDKV 111

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
              L     L    F+Y +L A D +     +D R+   G DQ  ++    D+  ++   
Sbjct: 112 AKGLSASHGL----FSYPVLMAADILL----FDTRIVPVGKDQIQHVEIARDIALKINNE 163

Query: 220 KLFALTSP---------LLTTASGTKMGKTLSGAI 245
                T P         ++    G KM K+    I
Sbjct: 164 WGEIFTLPEARVNEEVAVVVGTDGAKMSKSYQNTI 198


>gi|145225447|ref|YP_001136125.1| tryptophanyl-tRNA synthetase [Mycobacterium gilvum PYR-GCK]
 gi|315445800|ref|YP_004078679.1| tryptophanyl-tRNA synthetase [Mycobacterium sp. Spyr1]
 gi|145217933|gb|ABP47337.1| tryptophanyl-tRNA synthetase [Mycobacterium gilvum PYR-GCK]
 gi|315264103|gb|ADU00845.1| tryptophanyl-tRNA synthetase [Mycobacterium sp. Spyr1]
          Length = 337

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 50/301 (16%), Positives = 98/301 (32%), Gaps = 55/301 (18%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   T+ SLH G+    +  +   + G+     +    +I          RR + +    
Sbjct: 12  GAQPTSDSLHLGNALGAVSQWVSLQDGYDAYFCVVDLHAITVAQDPATLRRRTLVTA--- 68

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
                     + ++  G   + A +          +   +L     F   +RM  F+  +
Sbjct: 69  ----------AQYLALGIDPSRATVFVQSHVPSHAELAWVLGCFTGFGQASRMTQFKD-K 117

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL-------- 212
           S+ +  ++ +   F Y +L A D +     YD  L   G DQ  ++    D+        
Sbjct: 118 SQKQGAEATTVGLFTYPVLMAADVLL----YDTELVPVGEDQRQHLELARDVAQRINARF 173

Query: 213 ---------GERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
                         T K+F L  P        KM K+      L   +  P    +  R+
Sbjct: 174 PDTFVVPEAMIPKATAKIFDLQDPT------AKMSKSAESDAGLISLLDDPAKTAKKIRS 227

Query: 264 -IDDAD------------VVSFAKRLTTLPMSEIDR-MAKLQGKEINEAKKIIATEITTM 309
            + D++            V +     + +  ++ID+ +    G+   + KK  A  +   
Sbjct: 228 AVTDSEREIRFDREAKPGVSNLLTIQSAVTGTDIDKLVEGYAGRGYGDLKKETAEAVVEF 287

Query: 310 V 310
           V
Sbjct: 288 V 288


>gi|288931952|ref|YP_003436012.1| RNA-binding S4 domain protein [Ferroglobus placidus DSM 10642]
 gi|288894200|gb|ADC65737.1| RNA-binding S4 domain protein [Ferroglobus placidus DSM 10642]
          Length = 208

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 31/73 (42%), Gaps = 7/73 (9%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS-------TGNI 402
           M L   + K+G+  S ++A+  +K   +K+N  +I+    Q+K  +           G  
Sbjct: 1   MRLDEFLKKSGYFKSRSQAKEAIKRGFVKVNGKVITKPSFQVKGSEKIEVAEKGKPRGYY 60

Query: 403 KLSFGKKNHIICH 415
           KL    K + I  
Sbjct: 61  KLKELDKKYGIVE 73


>gi|156056190|ref|XP_001594019.1| hypothetical protein SS1G_05447 [Sclerotinia sclerotiorum 1980]
 gi|154703231|gb|EDO02970.1| hypothetical protein SS1G_05447 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 478

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 27/139 (19%), Positives = 45/139 (32%), Gaps = 14/139 (10%)

Query: 15  RGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG +    +    LD          Y G   ++ S+H GH        WLQ     P+ +
Sbjct: 77  RGIVFSHRDLNLMLDRHEKGEPFFLYTGRGPSSDSMHIGHTVPFEFTKWLQDVFDVPLII 136

Query: 74  MGGGTSIIGDPSF-RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL 132
           M     +  D  +   E R       I+E            I  G       M ++  ++
Sbjct: 137 M-----LTDDEKYIFSEKR------TIEEVQSYTNSNAKDIIAVGFDPKKTFMFSDYDYM 185

Query: 133 CSIKYIDLLREIGSFFSVN 151
               Y ++ R I    ++N
Sbjct: 186 GGAFYKNVTR-ISKHVTLN 203


>gi|29144895|gb|AAH46232.1| Wars protein [Mus musculus]
          Length = 475

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 40/248 (16%), Positives = 85/248 (34%), Gaps = 31/248 (12%)

Query: 15  RGFIHQISN-PRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +  + LD   ++     Y G   ++ ++H GHL   +   WLQ   + P+ +
Sbjct: 138 RGIFFSHRDMNQILDAYENKKPFYLYTGRGPSSEAMHLGHLVPFIFTKWLQDVFNVPLVI 197

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                         D+ + + +   +++            I  G       + ++  ++ 
Sbjct: 198 -----------QMSDDEKYLWKDLTLEQAYSYTVENAKDIIACGFDINKTFIFSDLEYMG 246

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA-----YDFVELA 188
                   R +     + + ++F  V+       S    + ++  +QA       F ++ 
Sbjct: 247 Q--SPGFYRNV---VKIQKHVTFNQVKGIFGFTDSDCIGKISFPAVQAAPSFSNSFPKIF 301

Query: 189 K---NYDCRLQMGGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTASGTKMGKTLS 242
           +   +  C +     DQ        D+  R+  PK   L +   P L  A  TKM  +  
Sbjct: 302 RDRTDIQCLIPC-AIDQDPYFRMTRDVAPRIGHPKPALLHSTFFPALQGAQ-TKMSASDP 359

Query: 243 G-AIWLNK 249
             +I+L  
Sbjct: 360 NSSIFLTD 367


>gi|67624621|ref|XP_668593.1| IFP53 [Cryptosporidium hominis TU502]
 gi|54659813|gb|EAL38376.1| IFP53 [Cryptosporidium hominis]
          Length = 593

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 62/337 (18%), Positives = 113/337 (33%), Gaps = 60/337 (17%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           F+ +    LS R F       + LD+     +   Y G   ++ SLH GHL   +   +L
Sbjct: 251 FRRNIF--LSHRDF------EKILDVYEKGELFYLYTGRGPSSESLHVGHLVPFLFTKYL 302

Query: 64  QKTGHKPISLMGGGTSIIGDPS--FRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKT 121
           Q T   P+ +      +  D    F+      +  +E               I  G    
Sbjct: 303 QDTFKVPLVI-----QLTDDEKFIFKSN----LTLEETHNYA---YENMKDIIACGFDPE 350

Query: 122 DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA 181
              +  N  ++  + Y D+LR       + + +S   ++S    + S +  +F +  +QA
Sbjct: 351 LTFIFTNLEYIGEL-YPDILR-------IEKKISCSQIKSIFGFKDSCNVGKFAFPAVQA 402

Query: 182 Y-----DFVELA---KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTAS 233
                  F  +     +  C +     DQ        D+  RL   K  ++ S  L +  
Sbjct: 403 APAFSSSFPHIFGGRTDVHCLVPH-AIDQDPYFRMVRDVAPRLGYLKPSSIHSIFLPSLQ 461

Query: 234 G--TKMGKTLSG-AIWLNKEMTSPYNFWQYW----------------RNIDDADVVSFAK 274
           G  TKM  ++   +I++N    S  N    +                 N+D      + +
Sbjct: 462 GSQTKMSASVQNSSIFVNDNEESIRNKIMKYAFSGGQATEEEQRRLGANLDVDVSWQYLR 521

Query: 275 RL--TTLPMSEIDRMAKLQGKEINEAKKIIATEITTM 309
            L      + EI +          E K I+  E+  +
Sbjct: 522 FLMEDDEKLEEIGKKYSSGEMLSGEIKSILVQELVKL 558


>gi|325138147|gb|EGC60720.1| tryptophanyl-tRNA synthetase [Neisseria meningitidis ES14902]
          Length = 336

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 40/218 (18%), Positives = 61/218 (27%), Gaps = 49/218 (22%)

Query: 174 FNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSP------ 227
           F+Y IL   D +    N +  +   G DQ  ++    D+  R         T P      
Sbjct: 136 FSYPILMTADILMFNAN-EVPV---GRDQIQHVEMARDIAGRFNHRFRELFTLPEVKIDE 191

Query: 228 ---LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWR---------NIDDAD-VVSFAK 274
              LL    G KM K+    I L +                         D   +    K
Sbjct: 192 NVELLVGLDGRKMSKSYGNTIPLWENDKKTQKSVNKIITNMKEPGEPKQPDESPLFEIYK 251

Query: 275 RLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQ 334
             +T   +         G    EAKK++A +I        E  +      E    +    
Sbjct: 252 AFSTPSETVEFTKMLADGLAWGEAKKLLAAKINA------ELAEPRERYNEL---TADPS 302

Query: 335 HMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHL 372
            +  I                 ++AG   +  EAR  L
Sbjct: 303 QIEEI-----------------LQAGAQKARKEARELL 323


>gi|169867176|ref|XP_001840169.1| tyrosyl-tRNA synthetase [Coprinopsis cinerea okayama7#130]
 gi|116498721|gb|EAU81616.1| tyrosyl-tRNA synthetase [Coprinopsis cinerea okayama7#130]
          Length = 456

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 37/230 (16%), Positives = 70/230 (30%), Gaps = 19/230 (8%)

Query: 18  IHQISNPRELDILCSQGV-VTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGG 76
           + ++     +  + ++G     Y G   T    H G+   L  +    + G +   L+  
Sbjct: 40  LQEVLGGDLIKGILAEGRHPKCYWGTAPTGRP-HIGYFVPLTKISDFLRAGVEVKILLAD 98

Query: 77  GTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK-YGTGKTDALMLNNETW-LCS 134
             + +      D  +  +    +    +  + I  S  K           +   T+ L  
Sbjct: 99  VHAFL------DNLKAPL--DLVAHRTKYYEFIVRSVFKSLNIPTEKLTFVTGSTFQLTK 150

Query: 135 IKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCR 194
              +D  R   +    +   +   V  +++           Y  LQA D   L     C 
Sbjct: 151 EYNLDNYRLCATVTEHDAKKAGAEVVKQVESPL---LSGLLYPGLQALDEEYL----GCD 203

Query: 195 LQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
            Q GG DQ            RL   K   L + ++    G KM  +   +
Sbjct: 204 FQFGGVDQRKIFTFAELYLPRLGYRKRAHLMNAMVPGLGGGKMSASDPNS 253


>gi|325132628|gb|EGC55317.1| tryptophanyl-tRNA synthetase [Neisseria meningitidis M6190]
          Length = 342

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 40/218 (18%), Positives = 61/218 (27%), Gaps = 49/218 (22%)

Query: 174 FNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSP------ 227
           F+Y IL   D +    N +  +   G DQ  ++    D+  R         T P      
Sbjct: 142 FSYPILMTADILMFNAN-EVPV---GRDQIQHVEMARDIAGRFNHRFRELFTLPEVKIDE 197

Query: 228 ---LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWR---------NIDDAD-VVSFAK 274
              LL    G KM K+    I L +                         D   +    K
Sbjct: 198 NVELLVGLDGRKMSKSYGNTIPLWENDKKTQKSVNKIITNMKEPGEPKQPDESPLFEIYK 257

Query: 275 RLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQ 334
             +T   +         G    EAKK++A +I        E  +      E    +    
Sbjct: 258 AFSTPSETVEFTKMLADGLAWGEAKKLLAAKINA------ELAEPRERYNEL---TADPS 308

Query: 335 HMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHL 372
            +  I                 ++AG   +  EAR  L
Sbjct: 309 QIEEI-----------------LQAGAQKARKEARELL 329


>gi|226529175|ref|NP_001149217.1| LOC100282839 [Zea mays]
 gi|195625536|gb|ACG34598.1| tyrosyl-tRNA synthetase [Zea mays]
          Length = 379

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 38/232 (16%), Positives = 81/232 (34%), Gaps = 21/232 (9%)

Query: 15  RGFIHQISNPRELDILCSQGVVTA-YIGYDLTASSLHA--GHLTQLMLLFWLQKTGHKPI 71
           RG   +     EL  L     V   Y G++ +   +H   G + + + +  + + G K  
Sbjct: 41  RGIGEECIQEDELRRLLENKPVPICYDGFEPSGR-MHIAQG-IVKTINVNKMVRAGCKVK 98

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
             +    + + +    D  +     + + E  +         +++     +     +E W
Sbjct: 99  IWIADWFAQLNNKMGGDLKKIQTVGRYMIEIWKAAGMNLD-GVEFLWSSEEINRRAHEYW 157

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
                   ++ +I    +V R+     +  R   +  L+  +  Y  +Q  D   L  + 
Sbjct: 158 P-------IVMDIARKNNVKRITRCCQIMGR-SDQDDLTAAQIFYPCMQCADIFFLKADI 209

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLLTT-ASGT-KMGKT 240
            C+L   G DQ    +   +  + +K   K   L+  +L     G  KM K+
Sbjct: 210 -CQL---GMDQRKVNVLAREYCDYIKRKNKPIILSHHMLPGFKEGQEKMSKS 257


>gi|121635154|ref|YP_975399.1| tryptophanyl-tRNA synthetase [Neisseria meningitidis FAM18]
 gi|254805247|ref|YP_003083468.1| Tryptophanyl-tRNA synthetase [Neisseria meningitidis alpha14]
 gi|120866860|emb|CAM10619.1| tryptophanyl-tRNA synthetase [Neisseria meningitidis FAM18]
 gi|254668789|emb|CBA06729.1| Tryptophanyl-tRNA synthetase [Neisseria meningitidis alpha14]
 gi|325142652|gb|EGC65041.1| tryptophanyl-tRNA synthetase [Neisseria meningitidis 961-5945]
 gi|325198604|gb|ADY94060.1| tryptophanyl-tRNA synthetase [Neisseria meningitidis G2136]
 gi|325201835|gb|ADY97289.1| tryptophanyl-tRNA synthetase [Neisseria meningitidis M01-240149]
 gi|325208413|gb|ADZ03865.1| tryptophanyl-tRNA synthetase [Neisseria meningitidis NZ-05/33]
          Length = 336

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 40/218 (18%), Positives = 61/218 (27%), Gaps = 49/218 (22%)

Query: 174 FNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSP------ 227
           F+Y IL   D +    N +  +   G DQ  ++    D+  R         T P      
Sbjct: 136 FSYPILMTADILMFNAN-EVPV---GRDQIQHVEMARDIAGRFNHRFRELFTLPEVKIDE 191

Query: 228 ---LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWR---------NIDDAD-VVSFAK 274
              LL    G KM K+    I L +                         D   +    K
Sbjct: 192 NVELLVGLDGRKMSKSYGNTIPLWENDKKTQKSVNKIITNMKEPGEPKQPDESPLFEIYK 251

Query: 275 RLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQ 334
             +T   +         G    EAKK++A +I        E  +      E    +    
Sbjct: 252 AFSTPSETVEFTKMLADGLAWGEAKKLLAAKINA------ELAEPRERYNEL---TADPS 302

Query: 335 HMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHL 372
            +  I                 ++AG   +  EAR  L
Sbjct: 303 QIEEI-----------------LQAGAQKARKEARELL 323


>gi|113866544|ref|YP_725033.1| tryptophanyl-tRNA synthetase II [Ralstonia eutropha H16]
 gi|113525320|emb|CAJ91665.1| Tryptophanyl-tRNA synthetase [Ralstonia eutropha H16]
          Length = 344

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 39/218 (17%), Positives = 66/218 (30%), Gaps = 23/218 (10%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
            T   LH GH    +      +  H+   L+    ++  +    D+ RR      + E  
Sbjct: 19  PTGP-LHLGHYVGSLKSRVTLQDTHEQYVLLADTQAMTDNAHDPDKVRR-----NVLEVA 72

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR- 162
                +          KT   + ++   L  +  +  L  +            E +++R 
Sbjct: 73  LDYLAVG-----IDPAKTTITVQSHLPALAELTLM-YLNFVTVARLERNPTIKEEIQARG 126

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRL---QMGGSDQWGNIICGIDLGERLKTP 219
             R+    FL   Y   QA D     K +   +   Q    +Q   I+  I+     +  
Sbjct: 127 FGRDIPAGFL--CYPASQAADITA-FKAHVVPVGEDQAPLIEQTNEIVRRINHQVGREVL 183

Query: 220 KLFALTSP---LLTTASGT-KMGKTLSGAIWLNKEMTS 253
                  P    L    G  KM K+L  AI L      
Sbjct: 184 PECKALIPEFGRLPGVDGKAKMSKSLGNAIALGASPEQ 221


>gi|86158110|ref|YP_464895.1| tryptophanyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-C]
 gi|85774621|gb|ABC81458.1| tryptophanyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 331

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 44/226 (19%), Positives = 68/226 (30%), Gaps = 43/226 (19%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKT--GHKPISLMGGG---TSIIGDPSFRDESRRMMR 95
           G   T   LH GHL     L    K    ++           T+   D S   ++ R M 
Sbjct: 12  GMRPTGR-LHLGHLHG--ALANWVKLQDDNECFFFSADWHALTTNYHDTSVIKQAEREMF 68

Query: 96  SQEIQENIEKIKGIF---SSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNR 152
              I   I+  K      S   ++        M+    WL                    
Sbjct: 69  VDFIAAGIDTSKATLFIQSRVKQHAELNLLLGMITPLGWLERSPT--------------Y 114

Query: 153 MLSFESVRSRLKREQSLSFLEFN-YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGID 211
               E++  R      L+   F  Y +L   D + L K     +   G DQ  ++    +
Sbjct: 115 KEQRENITDR-----DLALYGFLGYPVLMTAD-IILYKATRVPV---GVDQVPHLELSRE 165

Query: 212 LGERLKT--PKLFALTSPLLT------TASGTKMGKTLSGAIWLNK 249
           +  +      ++F    PLLT         G KM K+    I L +
Sbjct: 166 IVRKFNFHYGEVFPEPQPLLTAAPKILGTDGRKMSKSYGNTIDLGE 211


>gi|255264455|ref|ZP_05343797.1| ribosomal large subunit pseudouridine synthase B [Thalassiobium sp.
           R2A62]
 gi|255106790|gb|EET49464.1| ribosomal large subunit pseudouridine synthase B [Thalassiobium sp.
           R2A62]
          Length = 267

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 12/57 (21%), Positives = 28/57 (49%), Gaps = 1/57 (1%)

Query: 342 SKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
            ++    G  +  ++ +AG   S  EA R +++  +++N+ +I +  L +   D  S
Sbjct: 5   PENTGPTGQRIAKVLARAG-VASRREAERMIEAGRVRVNSKLIESPALNVVPSDRIS 60


>gi|307105291|gb|EFN53541.1| hypothetical protein CHLNCDRAFT_25698 [Chlorella variabilis]
          Length = 416

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/106 (21%), Positives = 38/106 (35%), Gaps = 11/106 (10%)

Query: 15  RGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +  EL     +G     Y G   ++ +LH GHL   M   WLQ     P+ +
Sbjct: 81  RGIFFAHRDLNELLDAYERGQPFYLYTGRGPSSEALHLGHLVPFMFTKWLQDAFRVPLVI 140

Query: 74  MGGGTSIIGDPSF-----RDESRRMMRSQEIQENIEKIKGIFSSFI 114
                 +  D  F       E  R +  +  ++ I     +  +F+
Sbjct: 141 -----QLTDDEKFLWRGLSVEESRRLARENCKDIIACGFDVARTFV 181


>gi|126460427|ref|YP_001056705.1| tryptophanyl-tRNA synthetase [Pyrobaculum calidifontis JCM 11548]
 gi|166225536|sp|A3MX72|SYW_PYRCJ RecName: Full=Tryptophanyl-tRNA synthetase; AltName:
           Full=Tryptophan--tRNA ligase; Short=TrpRS
 gi|126250148|gb|ABO09239.1| tryptophanyl-tRNA synthetase [Pyrobaculum calidifontis JCM 11548]
          Length = 374

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 47/239 (19%), Positives = 74/239 (30%), Gaps = 26/239 (10%)

Query: 12  LSERGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWL-QKTGHK 69
           L  RGF +   +   +     +G     Y G   +   +H GH+   +LL WL  K G +
Sbjct: 48  LIRRGFFYAHRDLDAILKWHGEGKPWALYTGRGPSGP-VHIGHMVPWILLKWLSDKFGVE 106

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
               M        DP  R E       +   + I          +   T           
Sbjct: 107 VYFQMTDDEKFYDDPEMRLEEATKWAYENALDVIALGFTPDKLHLIIDTKD--------- 157

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ---AYDFVE 186
             +  +  I           V + L++ +V++      S +     Y  LQ   A+   E
Sbjct: 158 --IKPLYPI--------AAKVAKKLTWNTVKATFGFTDSTNIGLIFYPSLQIAVAFLPTE 207

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGA 244
           L       L     DQ        D+ E L  PK   L S  +   +G  KM  +   +
Sbjct: 208 LHGRPTPVLIPCAIDQDPYFRLARDIAESLGYPKPATLYSKFIMALTGESKMSASNPNS 266


>gi|240080988|ref|ZP_04725531.1| tryptophanyl-tRNA synthetase [Neisseria gonorrhoeae FA19]
 gi|240117697|ref|ZP_04731759.1| tryptophanyl-tRNA synthetase [Neisseria gonorrhoeae PID1]
 gi|268597098|ref|ZP_06131265.1| tryptophanyl-tRNA synthetase [Neisseria gonorrhoeae FA19]
 gi|268603398|ref|ZP_06137565.1| tryptophanyl-tRNA synthetase [Neisseria gonorrhoeae PID1]
 gi|268550886|gb|EEZ45905.1| tryptophanyl-tRNA synthetase [Neisseria gonorrhoeae FA19]
 gi|268587529|gb|EEZ52205.1| tryptophanyl-tRNA synthetase [Neisseria gonorrhoeae PID1]
          Length = 336

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 37/201 (18%), Positives = 56/201 (27%), Gaps = 42/201 (20%)

Query: 174 FNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSP------ 227
           F+Y IL   D +    N +  +   G DQ  ++    D+  R         T P      
Sbjct: 136 FSYPILMTADILMFNAN-EVPV---GRDQIQHVEMARDIAGRFNHRFQELFTLPEVKIDE 191

Query: 228 ---LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWR---------NIDDAD-VVSFAK 274
              LL    G KM K+    I L +                         D   +    K
Sbjct: 192 NVELLVGLDGRKMSKSYGNTIPLWENDKKTQKSVNKIITNMKEPGEPKQPDESPLFEIYK 251

Query: 275 RLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHG-------------------REE 315
             +T   +         G    EAKK+ A +I   +                     +  
Sbjct: 252 AFSTPSETAEFTQMLADGLAWGEAKKLSAAKINAELAELRERYNALTSNPSQIEEILQAG 311

Query: 316 AEKAATAAMECFDMSIHSQHM 336
           A+KA   A E  D    +  +
Sbjct: 312 AQKARKEARELLDKVRDAVGI 332


>gi|256819496|ref|YP_003140775.1| tryptophanyl-tRNA synthetase [Capnocytophaga ochracea DSM 7271]
 gi|256581079|gb|ACU92214.1| tryptophanyl-tRNA synthetase [Capnocytophaga ochracea DSM 7271]
          Length = 322

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 30/166 (18%), Positives = 55/166 (33%), Gaps = 25/166 (15%)

Query: 144 IGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQW 203
           +  FF   R+    S + ++   Q ++   F Y +L A D +     YD  +   G DQ 
Sbjct: 95  LACFFPYQRLTLAHSFKDKMDYLQDVNAGLFTYPMLMAADILL----YDAEVVPVGKDQL 150

Query: 204 GNIICGIDLGERLKTPKLFALTSP---------LLTTASGTKMGKTLSG--AIWLNKEMT 252
            ++    D+  R           P         ++    G KM K+ +    I+L ++  
Sbjct: 151 QHLEITRDVASRFNHQMGETFVLPQAKIEEKIMIIPGTDGEKMSKSRNNFINIFLPEKQL 210

Query: 253 SPYNFWQYWRNID-----DAD---VVSFAKRLTTLPMSEIDRMAKL 290
                     +       D D   V+   + L      +I  M + 
Sbjct: 211 RKQIMAIQTDSTPLEAPKDPDTCNVMRLYRLLA--SPEQIQAMEEA 254


>gi|257125799|ref|YP_003163913.1| tryptophanyl-tRNA synthetase [Leptotrichia buccalis C-1013-b]
 gi|257049738|gb|ACV38922.1| tryptophanyl-tRNA synthetase [Leptotrichia buccalis C-1013-b]
          Length = 324

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 41/295 (13%), Positives = 80/295 (27%), Gaps = 51/295 (17%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   +   LH G+    +  F   +  ++    +    ++   P   D     +    + 
Sbjct: 6   GIQPSGI-LHIGNYFGAIKQFVELQDEYEGFYFLANYHALTSSPKGEDLKSNTINV-ILD 63

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETW-LCSIKYIDLLREIGSFFSVNRMLSFESV 159
                +    S+          A +    +W L +I  + LL    S+         + V
Sbjct: 64  YVALGLDPEKSTLFLQSDVPEHAEL----SWILSNISPMGLLERAHSY--------KDKV 111

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-- 217
              +K    L    F Y IL A D +     Y   +   G DQ  ++    D+  +    
Sbjct: 112 AKGIKPNVGL----FTYPILMAADILM----YSPDIVPVGKDQKQHVEMTRDIATKFNET 163

Query: 218 -TPKLFALTSP-------LLTTASGTKMGKTLSGAI-WLNKEMTSPYNFWQYWRNI---- 264
              ++F L           +    G KM K+    I     +            +I    
Sbjct: 164 YGKEVFKLPKEKIVENVATVPGTDGDKMSKSYGNVINMFGSKKALKKQI----MSIVTDS 219

Query: 265 --------DDADVVSFAKRL-TTLPMSEIDRMAKLQGKEINEAKKIIATEITTMV 310
                    D ++        T   +  +    +        AK  +  +     
Sbjct: 220 TPLEEPKNPDNNITKLYALFATEKEVEALKEKFRAGNFGYGHAKNELFDKFMDYF 274


>gi|311977495|ref|YP_003986615.1| tyrosyl-tRNA synthetase [Acanthamoeba polyphaga mimivirus]
 gi|81999898|sp|Q5UPJ7|SYY_MIMIV RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|55416749|gb|AAV50399.1| tyrosyl-tRNA synthetase [Acanthamoeba polyphaga mimivirus]
 gi|308204189|gb|ADO17990.1| tyrosyl-tRNA synthetase [Acanthamoeba polyphaga mimivirus]
          Length = 346

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 55/313 (17%), Positives = 103/313 (32%), Gaps = 35/313 (11%)

Query: 19  HQISNPRELDILCSQGVV-TAYIGYDLTASSLHAGH-LTQLMLLFWLQKTGHKPISLMGG 76
            +      L  L   G + TAY G++ +   +H    L  +M    + + G + I  +  
Sbjct: 21  EECETLDRLKQLVDSGRIFTAYNGFEPSGR-IHIAQALITVMNTNNIIECGGQMIIYIAD 79

Query: 77  GTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIK 136
             + +   + +          +I+E       +F +      G        +E    +  
Sbjct: 80  WFAKM---NLKMNG----DINKIRELGRYFIEVFKACGINLDGTRFIWA--SEFIASNPS 130

Query: 137 YIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQ 196
           YI+ + +I  F +++R+     +  R      L   +  Y  +QA D  EL       + 
Sbjct: 131 YIERMLDIAEFSTISRVKRCCQIMGR-NESDCLKASQIFYPCMQAADVFELVPE-GIDIC 188

Query: 197 MGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG--TKMGKTLS-GAIWLNKEMTS 253
             G DQ    +  I+           +L+  +L + SG   KM K+   GAI+++     
Sbjct: 189 QLGIDQRKVNMLAIEYANDRGLKIPISLSHHMLMSLSGPKKKMSKSDPQGAIFMDDTEQE 248

Query: 254 PYNFWQYWRNID---DADVVSFAKRLTTL-------------PMSEIDRMAKLQGKEINE 297
                      D   D  +  + K L                 +  I        K   E
Sbjct: 249 VSEKISRAYCTDETFDNPIFEYIKYLLLRWFGTLNLCGKIYTDIESIQEDFSSMNK--RE 306

Query: 298 AKKIIATEITTMV 310
            K  +A  I T++
Sbjct: 307 LKTDVANYINTII 319


>gi|19703747|ref|NP_603309.1| tryptophanyl-tRNA synthetase [Fusobacterium nucleatum subsp.
           nucleatum ATCC 25586]
 gi|25009429|sp|Q8RGA3|SYW_FUSNN RecName: Full=Tryptophanyl-tRNA synthetase; AltName:
           Full=Tryptophan--tRNA ligase; Short=TrpRS
 gi|19713881|gb|AAL94608.1| Tryptophanyl-tRNA synthetase [Fusobacterium nucleatum subsp.
           nucleatum ATCC 25586]
          Length = 325

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 31/215 (14%), Positives = 69/215 (32%), Gaps = 31/215 (14%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   +   LH G+    M  F   +  +     +    S+      + E+ +      + 
Sbjct: 7   GIQPSGI-LHIGNYFGAMKQFVDLQDSYDGFYFIADYHSLTSLT--KAETLKENTYNIVL 63

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           + +          +     K+   + +N      + ++     + +   V  +    S +
Sbjct: 64  DYLA---------VGLDPSKSTIFLQSNVPEHTELTWL-----LSNITPVGLLERGHSYK 109

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP- 219
            ++ +    +     Y +L A D +     YD  +   G DQ  ++    D+  +     
Sbjct: 110 DKIAKGIPSNTGLLTYPVLMAADILI----YDSDVVPVGKDQKQHLEMTRDIAMKFNQQY 165

Query: 220 --KLFALTSPLLT-------TASGTKMGKTLSGAI 245
             + F L  PL+           G KM K+ +  I
Sbjct: 166 GVEFFKLPEPLILDDSAIVPGTDGQKMSKSYNNTI 200


>gi|315224932|ref|ZP_07866751.1| tryptophan--tRNA ligase [Capnocytophaga ochracea F0287]
 gi|314945045|gb|EFS97075.1| tryptophan--tRNA ligase [Capnocytophaga ochracea F0287]
          Length = 322

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 30/166 (18%), Positives = 55/166 (33%), Gaps = 25/166 (15%)

Query: 144 IGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQW 203
           +  FF   R+    S + ++   Q ++   F Y +L A D +     YD  +   G DQ 
Sbjct: 95  LACFFPYQRLTLAHSFKDKMDYLQDVNAGLFTYPMLMAADILL----YDAEVVPVGKDQL 150

Query: 204 GNIICGIDLGERLKTPKLFALTSP---------LLTTASGTKMGKTLSG--AIWLNKEMT 252
            ++    D+  R           P         ++    G KM K+ +    I+L ++  
Sbjct: 151 QHLEITRDVASRFNHQMGETFVLPQAKIEEKIMIIPGTDGEKMSKSRNNFINIFLPEKQL 210

Query: 253 SPYNFWQYWRNID-----DAD---VVSFAKRLTTLPMSEIDRMAKL 290
                     +       D D   V+   + L      +I  M + 
Sbjct: 211 RKQIMAIQTDSTPLEAPKDPDTCNVMRLYRLLA--SPEQIQAMEEA 254


>gi|240014357|ref|ZP_04721270.1| tryptophanyl-tRNA synthetase [Neisseria gonorrhoeae DGI18]
 gi|240016790|ref|ZP_04723330.1| tryptophanyl-tRNA synthetase [Neisseria gonorrhoeae FA6140]
 gi|240121919|ref|ZP_04734881.1| tryptophanyl-tRNA synthetase [Neisseria gonorrhoeae PID24-1]
          Length = 336

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 37/201 (18%), Positives = 56/201 (27%), Gaps = 42/201 (20%)

Query: 174 FNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSP------ 227
           F+Y IL   D +    N +  +   G DQ  ++    D+  R         T P      
Sbjct: 136 FSYPILMTADILMFNAN-EVPV---GRDQIQHVEMARDIAGRFNHRFQELFTLPEVKIDE 191

Query: 228 ---LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWR---------NIDDAD-VVSFAK 274
              LL    G KM K+    I L +                         D   +    K
Sbjct: 192 NVELLVGLDGRKMSKSYGNTIPLWENDKKTQKSVNKIITNMKEPGEPKQPDESPLFEIYK 251

Query: 275 RLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHG-------------------REE 315
             +T   +         G    EAKK+ A +I   +                     +  
Sbjct: 252 AFSTPSETAEFTQMLADGLAWGEAKKLSAAKINAELAELRERYNALTSNPSQIEEILQAG 311

Query: 316 AEKAATAAMECFDMSIHSQHM 336
           A+KA   A E  D    +  +
Sbjct: 312 AQKARKEARELLDKVRDAVGI 332


>gi|162147095|ref|YP_001601556.1| ribosomal large subunit pseudouridine synthase B [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|209544155|ref|YP_002276384.1| RNA-binding S4 domain-containing protein [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|161785672|emb|CAP55243.1| putative ribosomal large subunit pseudouridine synthase B
           [Gluconacetobacter diazotrophicus PAl 5]
 gi|209531832|gb|ACI51769.1| RNA-binding S4 domain protein [Gluconacetobacter diazotrophicus PAl
           5]
          Length = 264

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 9/61 (14%), Positives = 24/61 (39%), Gaps = 1/61 (1%)

Query: 344 DEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
           D   RG  +   + ++G   S  +A R ++   +++N   +++    +   D        
Sbjct: 15  DRPERGERIAKWLARSG-VASRRDAERLVEEGRVRLNGEPVTHPATFVAAGDIVQVNGAV 73

Query: 404 L 404
           +
Sbjct: 74  V 74


>gi|59801417|ref|YP_208129.1| tryptophanyl-tRNA synthetase [Neisseria gonorrhoeae FA 1090]
 gi|194098308|ref|YP_002001366.1| tryptophanyl-tRNA synthetase [Neisseria gonorrhoeae NCCP11945]
 gi|239998725|ref|ZP_04718649.1| tryptophanyl-tRNA synthetase [Neisseria gonorrhoeae 35/02]
 gi|240112654|ref|ZP_04727144.1| tryptophanyl-tRNA synthetase [Neisseria gonorrhoeae MS11]
 gi|240115400|ref|ZP_04729462.1| tryptophanyl-tRNA synthetase [Neisseria gonorrhoeae PID18]
 gi|240123251|ref|ZP_04736207.1| tryptophanyl-tRNA synthetase [Neisseria gonorrhoeae PID332]
 gi|240125503|ref|ZP_04738389.1| tryptophanyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679]
 gi|260440791|ref|ZP_05794607.1| tryptophanyl-tRNA synthetase [Neisseria gonorrhoeae DGI2]
 gi|268594574|ref|ZP_06128741.1| tryptophanyl-tRNA synthetase [Neisseria gonorrhoeae 35/02]
 gi|268598721|ref|ZP_06132888.1| tryptophanyl-tRNA synthetase [Neisseria gonorrhoeae MS11]
 gi|268601079|ref|ZP_06135246.1| tryptophanyl-tRNA synthetase [Neisseria gonorrhoeae PID18]
 gi|268681878|ref|ZP_06148740.1| tryptophanyl-tRNA synthetase [Neisseria gonorrhoeae PID332]
 gi|268684093|ref|ZP_06150955.1| tryptophanyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679]
 gi|291044105|ref|ZP_06569821.1| tryptophanyl-tRNA synthetase [Neisseria gonorrhoeae DGI2]
 gi|59718312|gb|AAW89717.1| putative tryptophanyl-tRNA synthetase [Neisseria gonorrhoeae FA
           1090]
 gi|193933598|gb|ACF29422.1| tryptophanyl-tRNA synthetase [Neisseria gonorrhoeae NCCP11945]
 gi|268547963|gb|EEZ43381.1| tryptophanyl-tRNA synthetase [Neisseria gonorrhoeae 35/02]
 gi|268582852|gb|EEZ47528.1| tryptophanyl-tRNA synthetase [Neisseria gonorrhoeae MS11]
 gi|268585210|gb|EEZ49886.1| tryptophanyl-tRNA synthetase [Neisseria gonorrhoeae PID18]
 gi|268622162|gb|EEZ54562.1| tryptophanyl-tRNA synthetase [Neisseria gonorrhoeae PID332]
 gi|268624377|gb|EEZ56777.1| tryptophanyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679]
 gi|291012568|gb|EFE04557.1| tryptophanyl-tRNA synthetase [Neisseria gonorrhoeae DGI2]
 gi|317164016|gb|ADV07557.1| tryptophanyl-tRNA synthetase [Neisseria gonorrhoeae TCDC-NG08107]
          Length = 336

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 37/201 (18%), Positives = 56/201 (27%), Gaps = 42/201 (20%)

Query: 174 FNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSP------ 227
           F+Y IL   D +    N +  +   G DQ  ++    D+  R         T P      
Sbjct: 136 FSYPILMTADILMFNAN-EVPV---GRDQIQHVEMARDIAGRFNHRFQELFTLPEVKIDE 191

Query: 228 ---LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWR---------NIDDAD-VVSFAK 274
              LL    G KM K+    I L +                         D   +    K
Sbjct: 192 NVELLVGLDGRKMSKSYGNTIPLWENDKKTQKSVNKIITNMKEPGEPKQPDESPLFEIYK 251

Query: 275 RLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHG-------------------REE 315
             +T   +         G    EAKK+ A +I   +                     +  
Sbjct: 252 AFSTPSETAEFTQMLADGLAWGEAKKLSAAKINAELAELRERYNALTSNPSQIEEILQAG 311

Query: 316 AEKAATAAMECFDMSIHSQHM 336
           A+KA   A E  D    +  +
Sbjct: 312 AQKARKEARELLDKVRDAVGI 332


>gi|212640268|ref|YP_002316788.1| tryptophanyl-tRNA synthetase [Anoxybacillus flavithermus WK1]
 gi|212561748|gb|ACJ34803.1| Tryptophanyl-tRNA synthetase [Anoxybacillus flavithermus WK1]
          Length = 332

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 36/235 (15%), Positives = 72/235 (30%), Gaps = 36/235 (15%)

Query: 41  GYDLTASSLHAGHLTQLML--LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQE 98
           G   T   +H G+    +   L   Q+    PI  +    ++    +  D  R       
Sbjct: 9   GIKPTG-YIHLGNYVGAIKPALNLAQQDNLIPIYFIADYHALTSINNPSDYRR------- 60

Query: 99  IQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLS-FE 157
                  I  + ++++  G      +           +   +L  +     +NR  +   
Sbjct: 61  ------YIYSLAATWLSLGLNPDKVIFYKQSDLPEVFELTWILSCLTPKGLMNRAHAYKS 114

Query: 158 SVRSRLKRE----QSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLG 213
            V   ++R       ++   + Y IL A D +     ++  +   G DQ  +I    D+ 
Sbjct: 115 KVDINIERGLDIDNGINMGLYTYPILMAADILL----FNADIVPVGKDQVQHIEIARDIA 170

Query: 214 ERLKTPKLFALTSP---------LLTTASGTKMGKTLSGAIWL--NKEMTSPYNF 257
            +           P         +L    G KM K+ +  I L  + +      F
Sbjct: 171 LQFNKTYGEIFNIPNYSINEETSVLPGIDGRKMSKSYNNTIPLFESPDKLKKQIF 225


>gi|323343298|ref|ZP_08083525.1| tryptophan--tRNA ligase [Prevotella oralis ATCC 33269]
 gi|323095117|gb|EFZ37691.1| tryptophan--tRNA ligase [Prevotella oralis ATCC 33269]
          Length = 328

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 61/361 (16%), Positives = 108/361 (29%), Gaps = 72/361 (19%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRD--ESRRMMRSQE 98
           G   T + LH G+    +  F   +  ++ +  +    S+   P   D   S R++ ++ 
Sbjct: 7   GIRPTGN-LHLGNYFGAVKSFVEMQDKYESLFFIADWHSLTTRPKPEDIQNSARIILAEY 65

Query: 99  IQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
           +   I+  K                L LN   +L  ++ +   +E       N       
Sbjct: 66  LACGIDPEKAPIYIQSDVKETLELYLFLNMNMYLGELERVTTFKEKARKQPNNV------ 119

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
                     L      Y  L A D ++  +     +   G DQ  N+        R   
Sbjct: 120 -------NAGL----LTYPTLMAADILQ-HRAEKVPV---GKDQEQNMEMARRCARRFNN 164

Query: 219 --------PKL---FALTSPLLTTASGT-KMGKTLSGAIWL-NKEMTSPYNFWQYW---- 261
                         F  T+  +    G+ KMGK+    I+L + + T      +      
Sbjct: 165 IYGVEFFPEPQSFYFNATALKVPGLDGSGKMGKSEGNCIYLHDDDKTITKKVMKAVTDNG 224

Query: 262 ---RNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEA-------KKIIATEITTMVH 311
               N    +V+      T L +           ++ N+        KK IA +I   V 
Sbjct: 225 PQAMNSPKPEVIE--NLFTFLKICSTQDTYDFFNEKWNDCTLRYGDLKKQIAADICKTV- 281

Query: 312 GREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRH 371
                   A    +  + S   + +  I+    EV+R     TL           E RR 
Sbjct: 282 --------APIREKILEYSADKELLDRIARQGAEVARESATATL----------REVRRI 323

Query: 372 L 372
           +
Sbjct: 324 I 324


>gi|302558865|ref|ZP_07311207.1| tryptophanyl-tRNA synthetase [Streptomyces griseoflavus Tu4000]
 gi|302476483|gb|EFL39576.1| tryptophanyl-tRNA synthetase [Streptomyces griseoflavus Tu4000]
          Length = 337

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 49/297 (16%), Positives = 95/297 (31%), Gaps = 47/297 (15%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTS--IIGDPSFRDESRRMMRSQE 98
           G   TA S H G+    +  +   +  H    ++    +  +  DP     + R+  +Q 
Sbjct: 11  GIQPTAGSFHLGNYLGAVRQWVALQETHDAFYMVVDLHAITLPQDPDVLRANTRLAAAQL 70

Query: 99  IQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
           +   ++  +               A ++N  T       +   ++  +    +R      
Sbjct: 71  LAAGLDPDRCTLFVQSHVPEHAQLAWVMNCLTGFGEASRMTQFKDKSAKQGADRA----- 125

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
                      S   F Y ILQ  D + L +  +  +   G DQ  +I    DL +R   
Sbjct: 126 -----------SVGLFTYPILQVADIL-LYQADEVPV---GEDQRQHIELTRDLADRFNG 170

Query: 219 --PKLFALTSPLLTTASGT---------KMGKTLSGAIWLNKEMTSPYNFWQYWRN-IDD 266
              + F +  P +   +           KM K+ S    L   +  P    +  ++ + D
Sbjct: 171 RFGETFTMPKPYILKETAKIYDLQDPSIKMSKSASTPKGLINLLDEPRTTAKKVKSAVTD 230

Query: 267 AD-VVSF-----------AKRLTTLPMSEIDRMAKL-QGKEINEAKKIIATEITTMV 310
            D V+ +               +TL  + I  + +   GK     K  +A  +   V
Sbjct: 231 TDTVIRYDVVEKPGVSNLLTIFSTLTGTGIPELEERYAGKGYGALKTDLAEVMVEFV 287


>gi|118579018|ref|YP_900268.1| tryptophanyl-tRNA synthetase [Pelobacter propionicus DSM 2379]
 gi|118501728|gb|ABK98210.1| tryptophanyl-tRNA synthetase [Pelobacter propionicus DSM 2379]
          Length = 355

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 39/234 (16%), Positives = 64/234 (27%), Gaps = 38/234 (16%)

Query: 44  LTASSLHAGHLTQ-LMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN 102
            T   LH GHL   L     LQ  G     ++     +     F   +   ++       
Sbjct: 35  PTGR-LHVGHLFGSLQNRIRLQSLGVPTFIVIADYQVLTDRDHFDSIAENTLQLA----- 88

Query: 103 IEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR-- 160
                   S  I      TD    ++   L  +  +  L  +            E ++  
Sbjct: 89  ----IDYLSVGIDPIGEDTDIFPHSHVPELNQLL-LPFLTLVTLSELDRNPTVKEEIQSA 143

Query: 161 --SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNI----ICGIDLGE 214
              R+          + Y I QA D   L    +      G DQ  ++           E
Sbjct: 144 GLKRINAGM------YTYPIHQAAD--ILFCKGNVV--PVGKDQLPHLEITRTIARRFNE 193

Query: 215 RLKTPKLF-------ALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQY 260
           +    K            +PL+    G  KM K+ + AI L+          + 
Sbjct: 194 KFGQGKQVFPEPQPLLSQAPLILGLDGSQKMSKSRNNAIMLSATAEETAALIKK 247


>gi|194873727|ref|XP_001973267.1| GG13450 [Drosophila erecta]
 gi|190655050|gb|EDV52293.1| GG13450 [Drosophila erecta]
          Length = 525

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 55/333 (16%), Positives = 96/333 (28%), Gaps = 55/333 (16%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R    +     +L  +  +  +  Y G   T    H  +   +  +    K G +  
Sbjct: 12  LITRNL-QETLGDDKLTKILGERDLKIYWGTATTGKP-HVAYFVPMSKIADFLKAGCEVT 69

Query: 72  SLMGGGTSII---GDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
            L     + +     P    E R     Q I+  +  I       +K+  G         
Sbjct: 70  ILFADLHAYLDNMKAPWSLLELRTQYYEQVIKAMLSSIGVPLEK-LKFVKGSDYQ----- 123

Query: 129 ETWLCSIKYIDLLREIGSFFSV-NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
              L     +D+ +          +    E V+   + E  L      Y  LQA D   L
Sbjct: 124 ---LSKEYTLDVYKLSSVVTQHDAKKAGAEVVK---QVEYPL-LSGLLYPGLQALDEEYL 176

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
                   Q GG DQ            +L   K     +P++   +G KM  +   +   
Sbjct: 177 K----VDAQFGGVDQRKIFTFSEKYLPQLGYEKRIHFMNPMVPGLAGGKMSSSEEDS--K 230

Query: 248 NKEMTSPYNFWQYWR-------NIDDADVVSFAK-----------------------RLT 277
              + SP N  +  +       NI D  ++SF K                        +T
Sbjct: 231 IDLLDSPANVKKKLKKAFCEPGNIADNGLLSFVKHVLFSLFKEGEGFEVNREAEHGGDVT 290

Query: 278 TLPMSEIDRMAKLQGKEINEAKKIIATEITTMV 310
            L   E+++          + K  +   I  ++
Sbjct: 291 FLKYEELEKYYAEDKLHPGDLKATVEKYINRLL 323


>gi|315161601|gb|EFU05618.1| tryptophan--tRNA ligase [Enterococcus faecalis TX0645]
          Length = 334

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 55/343 (16%), Positives = 102/343 (29%), Gaps = 57/343 (16%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSF-RDESRRMMRSQEIQEN 102
            T   LH GH    +      +        +     +I D     D +R     +++  N
Sbjct: 10  PTGK-LHLGHYVGSLKKRVEMQADPTNQLFV-----MIADLQALTDNARNP---EKVSAN 60

Query: 103 IEKIKGIFSSFIKY-----GTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFE 157
           +          + Y        KT   + +    L  +    L     S    N  +  E
Sbjct: 61  V------LEVALDYLAVGLDPTKTTIFIQSQIPQLAELTMYYLNLVTTSRVRRNPTVKAE 114

Query: 158 SVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK 217
             + +        F  F Y + QA D       +   L   G DQ   +    ++     
Sbjct: 115 IEQKKFGEGVPTGF--FIYPVSQAADITA----FQANLVPVGEDQKPMLEQAQEIVHSFN 168

Query: 218 TPKLFALTSP----------LLTTASGT-KMGKTLSGAIWLNKEMT--SPYNFWQYW--- 261
                 L  P           L    G  KM K+L   I+L+             Y    
Sbjct: 169 QTYGEVLVRPEAVLPPKGMGRLPGIDGNGKMSKSLGNGIYLSDPAEVVQKKVMSMYTDPN 228

Query: 262 -RNIDD------ADVVSFAKRLTTLP--MSEIDRMAKLQGKEINEAKK----IIATEITT 308
              I+D        V ++          + E+    +  G    + K+    ++  E+  
Sbjct: 229 HIRIEDPGQVEGNMVFTYLDVFGKEKEYIEELKEHYRHGGLGDVKIKRYLIDVLEEELAP 288

Query: 309 MVHGREEAEKAATAAME-CFDMSIHSQHMPTISISKDEVSRGM 350
           +   REE  K   A ME     S+ ++ +   ++++ + + G+
Sbjct: 289 IRRRREELAKNPEAIMEMLHKGSLAAEKVAAQTLTEVKKAMGI 331


>gi|66362732|ref|XP_628332.1| tryptophanyl-tRNA synthetase [Cryptosporidium parvum Iowa II]
 gi|46229385|gb|EAK90203.1| tryptophanyl-tRNA synthetase [Cryptosporidium parvum Iowa II]
 gi|323509469|dbj|BAJ77627.1| cgd7_1490 [Cryptosporidium parvum]
          Length = 593

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 62/337 (18%), Positives = 113/337 (33%), Gaps = 60/337 (17%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           F+ +    LS R F       + LD+     +   Y G   ++ SLH GHL   +   +L
Sbjct: 251 FRRNIF--LSHRDF------EKILDVYEKGELFYLYTGRGPSSESLHVGHLVPFLFTKYL 302

Query: 64  QKTGHKPISLMGGGTSIIGDPS--FRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKT 121
           Q T   P+ +      +  D    F+      +  +E               I  G    
Sbjct: 303 QDTFKVPLVI-----QLTDDEKFIFKSN----LTLEETHNYA---YENMKDIIACGFDPE 350

Query: 122 DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA 181
              +  N  ++  + Y D+LR       + + +S   ++S    + S +  +F +  +QA
Sbjct: 351 LTFIFTNLEYIAEL-YPDILR-------IEKKISCSQIKSIFGFKDSCNVGKFAFPAVQA 402

Query: 182 Y-----DFVELA---KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTAS 233
                  F  +     +  C +     DQ        D+  RL   K  ++ S  L +  
Sbjct: 403 APAFSSSFPHIFGGRTDIHCLVPH-AIDQDPYFRMVRDVAPRLGYLKPSSIHSIFLPSLQ 461

Query: 234 G--TKMGKTLSG-AIWLNKEMTSPYNFWQYW----------------RNIDDADVVSFAK 274
           G  TKM  ++   +I++N    S  N    +                 N+D      + +
Sbjct: 462 GSQTKMSASVQNSSIFVNDNEESIRNKIMKYAFSGGQATEEEQRRLGANLDVDVSWQYLR 521

Query: 275 RL--TTLPMSEIDRMAKLQGKEINEAKKIIATEITTM 309
            L      + EI +          E K I+  E+  +
Sbjct: 522 FLMEDDEKLEEIGKKYSSGEMLSGEIKSILVQELVKL 558


>gi|85100099|ref|XP_960902.1| tryptophanyl-tRNA synthetase [Neurospora crassa OR74A]
 gi|28922433|gb|EAA31666.1| tryptophanyl-tRNA synthetase [Neurospora crassa OR74A]
 gi|28950279|emb|CAD71247.1| probable tryptophan--tRNA ligase [Neurospora crassa]
          Length = 491

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 25/140 (17%), Positives = 48/140 (34%), Gaps = 14/140 (10%)

Query: 15  RGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG +    +    LD          Y G   ++ S+H GH        WLQ T   P+ +
Sbjct: 83  RGIVFSHRDLELILDRYEKGEPFYLYTGRGPSSDSVHVGHTIPFEFTKWLQDTFDVPLVI 142

Query: 74  MGGGTSIIGDPSF-RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL 132
           M     +  D  +   + R       I+E            I  G       + ++  ++
Sbjct: 143 M-----MTDDEKYLFSDKR------TIEEVEGYCSNNAKDIIAVGFDPNKTFIFSDFQYM 191

Query: 133 CSIKYIDLLREIGSFFSVNR 152
               Y +++R +    ++N+
Sbjct: 192 GGAFYKNVVR-LSKHITLNQ 210


>gi|327399496|ref|YP_004340365.1| 30S ribosomal protein S4 [Hippea maritima DSM 10411]
 gi|327182125|gb|AEA34306.1| ribosomal protein S4 [Hippea maritima DSM 10411]
          Length = 208

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/59 (22%), Positives = 24/59 (40%), Gaps = 8/59 (13%)

Query: 347 SRGMGLLTLI--------VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
             G  L+ L+         ++G A+S  EARR +    I++N   +      ++  D  
Sbjct: 87  ETGANLVVLLERRLDNVVYRSGMASSRREARRLVTHGHIRVNGHKVDIPSYLVRKGDVI 145


>gi|195428555|ref|XP_002062338.1| GK17487 [Drosophila willistoni]
 gi|194158423|gb|EDW73324.1| GK17487 [Drosophila willistoni]
          Length = 529

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 40/236 (16%), Positives = 69/236 (29%), Gaps = 23/236 (9%)

Query: 10  SILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
             L  R    +     +L+ +  +  +  Y G   T    H  +   +  +    K G +
Sbjct: 10  KELITRNL-QETLGEDKLNAILKERDLKIYWGTATTGKP-HVAYFVPMSKIADFLKAGCE 67

Query: 70  PISLMGGGTSII---GDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
              L     + +     P    E R     Q I+  +  I       +++  G       
Sbjct: 68  VTILFADLHAYLDNMKAPWSLLELRTQYYEQVIKSMLRSIGVPLEK-LRFVKGSDYQ--- 123

Query: 127 NNETWLCSIKYIDLLREIGSFFSV-NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
                L     +D+ +          +    E V+   + E  L      Y  LQA D  
Sbjct: 124 -----LSKEYTLDVYKLTSVVTQHDAKKAGAEVVK---QVEYPL-LSGLLYPGLQALDEE 174

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            L        Q GG DQ            +L   K     +P++   +G KM  + 
Sbjct: 175 YLK----VDAQFGGVDQRKIFTFSEKYLPQLGYEKRIHFMNPMVPGLAGGKMSSSE 226


>gi|126739258|ref|ZP_01754952.1| RNA pseudouridylate synthase family protein [Roseobacter sp.
           SK209-2-6]
 gi|126719875|gb|EBA16583.1| RNA pseudouridylate synthase family protein [Roseobacter sp.
           SK209-2-6]
          Length = 377

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/51 (25%), Positives = 24/51 (47%), Gaps = 1/51 (1%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
           S G  +  ++ +AG   S  EA R +    I +N ++I +  L +  Q+  
Sbjct: 66  STGDRIAKVLSRAG-VASRREAERMIAEGRISVNGTVIDSPALNVTGQERI 115


>gi|315051574|ref|XP_003175161.1| tyrosyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
 gi|311340476|gb|EFQ99678.1| tyrosyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
          Length = 396

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 37/210 (17%), Positives = 69/210 (32%), Gaps = 43/210 (20%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
            T    H G+   L+      + G + I       + + +  F           ++Q   
Sbjct: 47  PTGKP-HIGYFIPLIKFADFIRAGGEVIVEYIDVYAFLVNYKF--------PWDQVQHRA 97

Query: 104 EKIKGIFSSFIK-YGTGKTDALMLNNETWLCSIK-YIDL-----------LREIGSFFSV 150
              + I ++ +K  G   +   M+ + ++  + K  +D             R+ G+    
Sbjct: 98  TYYRSIITAALKAIGVPSSKVSMVQSSSFQGTHKFCLDFWKLCALCSQQDSRDTGAEVGA 157

Query: 151 NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGI 210
           + MLS             +        +LQ      L    D  +Q GG DQ G    G 
Sbjct: 158 STMLS------------PM-----LTPLLQELSEEHL----DVDVQFGGKDQRGIFNLGE 196

Query: 211 DLGERLKTPKLFALTSPLLTTASGTKMGKT 240
               +L   K   L + +L + +G KM  +
Sbjct: 197 QFLPQLGYAKRVHLLNEMLPSLTGGKMSSS 226


>gi|241758834|ref|ZP_04756947.1| tryptophan--tRNA ligase [Neisseria flavescens SK114]
 gi|241321042|gb|EER57255.1| tryptophan--tRNA ligase [Neisseria flavescens SK114]
          Length = 367

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 41/286 (14%), Positives = 86/286 (30%), Gaps = 44/286 (15%)

Query: 50  HAGHLTQLM--LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIK 107
           H G+    +   +   Q +  +    +     II          +    + I ++ + + 
Sbjct: 48  HLGNYVGAIRPAIRAAQDSNTESFLFLADYHGII----------KCHEPEMIHQSTQAVA 97

Query: 108 GIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLS-FESVRSRLKRE 166
             +   +  G                 ++   +L  I +   +NR  +   +V++  +  
Sbjct: 98  ATW---LACGLNPEQTTFYRQSDIPEVMELNWILTCITAKGLMNRAHAYKAAVQTNTENG 154

Query: 167 Q-----SLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKL 221
           Q      +    ++Y IL   D + +   ++  +   G DQ  ++    D+  R      
Sbjct: 155 QDDPDHGVEMGLYSYPILMTADIL-MFNAHEVPV---GRDQIQHVEMARDIAGRFNHRFQ 210

Query: 222 FALTSP---------LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWR---------N 263
              T P         LL    G KM K+    I L +                       
Sbjct: 211 ELFTLPEVKIDENVELLVGLDGRKMSKSYGNTIPLWENDKKTQKSVNKIITNMKEPGEPK 270

Query: 264 IDDAD-VVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITT 308
             D   +    K  +T   +        +G    EAKK+++ +I  
Sbjct: 271 QPDESPLFEIYKAFSTPSETAEFTQMLAEGLAWGEAKKLLSAKINA 316


>gi|332192840|gb|AEE30961.1| nucleotidyl transferase domain-containing protein [Arabidopsis
           thaliana]
          Length = 748

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 57/363 (15%), Positives = 119/363 (32%), Gaps = 53/363 (14%)

Query: 19  HQISNPRELDILCSQGVVTA-YIGYDLTASSLHA--GHLTQLMLLFWLQKTGHKPISLMG 75
            Q  +  EL  L ++      Y G++ +   +H   G L ++M +  L   G +    + 
Sbjct: 37  EQCIHDDELKDLLAKKAAPVCYDGFEPSGR-MHIAQG-LMKIMNVNKLTSAGCRVKIWIA 94

Query: 76  GGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSI 135
              + + +    D        ++I+   E  K IF +    G    +   L +   + + 
Sbjct: 95  DWFAYMNNKLGGD-------LKKIRVVGEYFKEIFQAA---GMNSENVEFLWSSDEINAK 144

Query: 136 KYI--DLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDC 193
                 L+ +I    S+ ++     +   L   + LS     Y+ +Q  D   L  +   
Sbjct: 145 GDEYWPLVMDIACRNSLAQIKRCMPIMG-LSENEELSAAHILYVCMQCADTFFLEAD--- 200

Query: 194 RLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLLTT--ASGTKMGKTL-SGAIWLNK 249
             Q+G   Q  N++   D  + +K   K   L+  +L        KM K+  S AI++  
Sbjct: 201 ICQLGMDQQTVNLLA-RDYCDVVKRENKPVILSHHMLPGLQQGQKKMSKSDPSSAIFMED 259

Query: 250 EMTSPYNFWQYWRNIDD------------ADVVSFAKRL------------TTLPMSEID 285
           E        +      D              ++ +                T     +I 
Sbjct: 260 EEAEVNVKIKKAYCPPDIVEGNPCLEYVKHIILPWFSEFTVERDEKYGGNRTFKSFEDIT 319

Query: 286 RMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMS---IHSQHMPTISIS 342
              +       + K  ++  +  ++    +  K  + A            ++ +PT S +
Sbjct: 320 TDYESGQLHPKDLKDALSKALNKILQPVRDHFKTNSRAKNLLKQVKGYKVTRVIPTASST 379

Query: 343 KDE 345
           K+E
Sbjct: 380 KEE 382


>gi|291456443|ref|ZP_06595833.1| ribosomal RNA large subunit methyltransferase J [Bifidobacterium
           breve DSM 20213]
 gi|291381720|gb|EFE89238.1| ribosomal RNA large subunit methyltransferase J [Bifidobacterium
           breve DSM 20213]
          Length = 248

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 7/40 (17%), Positives = 20/40 (50%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           +V +    S ++A+R +K+  ++++   I+     +K   
Sbjct: 10  LVASDLVESRSKAQRLIKAGHVRVDGETITKPSFMVKAGH 49


>gi|29829960|ref|NP_824594.1| tryptophanyl-tRNA synthetase [Streptomyces avermitilis MA-4680]
 gi|39932355|sp|Q82HU1|SYW1_STRAW RecName: Full=Tryptophanyl-tRNA synthetase 1; AltName:
           Full=Tryptophan--tRNA ligase 1; Short=TrpRS 1
 gi|29607070|dbj|BAC71129.1| putative tryptophanyl-tRNA synthetase [Streptomyces avermitilis
           MA-4680]
          Length = 337

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 50/297 (16%), Positives = 96/297 (32%), Gaps = 47/297 (15%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSII--GDPSFRDESRRMMRSQE 98
           G   TA S H G+    +  +   +  H    ++    +I    DP+    + R+  +Q 
Sbjct: 11  GIQPTAGSFHLGNYLGAVRQWVALQESHDAFYMVVDLHAITVPQDPADLRANTRLAAAQL 70

Query: 99  IQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
           +   ++  +               A ++N  T       +   ++  +    +R      
Sbjct: 71  LAAGLDPERCTLFVQSHVPEHAQLAWIMNCLTGFGEASRMTQFKDKSAKQGADRA----- 125

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
                      S   F Y +LQ  D + L +  +  +   G DQ  +I    DL ER   
Sbjct: 126 -----------SVGLFTYPVLQVADIL-LYQANEVPV---GEDQRQHIELTRDLAERFNG 170

Query: 219 --PKLFALTSPLLTTASGT---------KMGKTLSGAIWLNKEMTSPYNFWQYWRN-IDD 266
              + F +  P +   +           KM K+ S    L   +  P    +  ++ + D
Sbjct: 171 RFGETFTVPKPYILKETAKIFDLQDPSIKMSKSASTPKGLINLLDEPKATAKKVKSAVTD 230

Query: 267 AD-VVSF-----------AKRLTTLPMSEIDRMAKL-QGKEINEAKKIIATEITTMV 310
            D V+ +               +TL  + I  + +   GK     K  +A  +   V
Sbjct: 231 TDTVIRYDAEHKPGISNLLTIYSTLTGTGIPELEEKYTGKGYGALKTDLAEVMVDFV 287


>gi|237714330|ref|ZP_04544811.1| tryptophanyl-tRNA synthetase II [Bacteroides sp. D1]
 gi|262408163|ref|ZP_06084710.1| tryptophanyl-tRNA synthetase [Bacteroides sp. 2_1_22]
 gi|294645111|ref|ZP_06722836.1| tryptophan--tRNA ligase [Bacteroides ovatus SD CC 2a]
 gi|294809737|ref|ZP_06768424.1| tryptophan--tRNA ligase [Bacteroides xylanisolvens SD CC 1b]
 gi|229445494|gb|EEO51285.1| tryptophanyl-tRNA synthetase II [Bacteroides sp. D1]
 gi|262353715|gb|EEZ02808.1| tryptophanyl-tRNA synthetase [Bacteroides sp. 2_1_22]
 gi|292639535|gb|EFF57828.1| tryptophan--tRNA ligase [Bacteroides ovatus SD CC 2a]
 gi|294443071|gb|EFG11851.1| tryptophan--tRNA ligase [Bacteroides xylanisolvens SD CC 1b]
 gi|295088076|emb|CBK69599.1| tryptophanyl-tRNA synthetase [Bacteroides xylanisolvens XB1A]
          Length = 364

 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 40/239 (16%), Positives = 71/239 (29%), Gaps = 41/239 (17%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN 102
            T   LH GH    +     LQ  G      +      I D      +  +   +++++N
Sbjct: 13  PTGR-LHIGHYVGSLKRRVDLQNAGDYSKMFI-----FIADSQ--ALTDNIDNPEKVRQN 64

Query: 103 IEKIKGIFSSFIKY-----GTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFE 157
           +          + Y        K    + +    LC + +  +     S    N  +  E
Sbjct: 65  V------IEVALDYLACGIDPTKATIFIQSQIPELCELSFYYMDLVSVSRLQRNPTVKSE 118

Query: 158 SVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK 217
                 +    + F  F Y I QA D     +     +   G DQ   +    ++  R  
Sbjct: 119 IQMRNFEASIPVGF--FTYPISQAADITA-FRATTVPV---GEDQEPMLEQAREIVRRFN 172

Query: 218 -------TPKLFALTSPL----LTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNI 264
                        L        L    G  KM K+L   I+L++E   P    +   ++
Sbjct: 173 YIYGETLVEPEILLPDNAACLRLPGTDGKAKMSKSLGNCIYLSEE---PEEIQKKIMSM 228


>gi|322696039|gb|EFY87837.1| tyrosyl-tRNA synthetase [Metarhizium acridum CQMa 102]
          Length = 390

 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 39/233 (16%), Positives = 82/233 (35%), Gaps = 21/233 (9%)

Query: 15  RGFIHQISNPRELDILCSQGV-VTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           R  + ++ NP  ++ + ++G     Y G   T    H G+    + +      G     L
Sbjct: 14  RENLAEVLNPEIIEKILAEGRHPKIYWGTATTGRP-HCGYFVPAIKIAQFLAAGCDVTIL 72

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK-YGTGKTDALMLNNETWL 132
           +      + +             + +++ +   + + ++ ++  G        +   ++ 
Sbjct: 73  LADIHGFLDNLKA--------PIELVEQRVHFYRYVITAMLEAVGVSTEKLRFVQGSSYQ 124

Query: 133 CSIKYIDLLREIGSFFSV--NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
            S +Y+  + ++ S  S    +    E V+        LS L   Y ILQ  D   L   
Sbjct: 125 KSPEYVMDIYKLSSLVSEHDAKRAGAEVVKQ--TANAPLSGL--LYPILQVLDEQYL--- 177

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSG 243
            D   Q GG DQ        +   ++   +   L +P++    G KM  +  G
Sbjct: 178 -DVDAQFGGLDQRKLFTAAKEWLPKIGYKQRAHLLNPMVPGLQGGKMSSSDQG 229


>gi|317969027|ref|ZP_07970417.1| RNA-binding S4 [Synechococcus sp. CB0205]
          Length = 260

 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 22/113 (19%), Positives = 48/113 (42%), Gaps = 6/113 (5%)

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGL-LT 354
             A+ I+  E+     GR    ++   + E     + +  +P     K   S    L L 
Sbjct: 132 RGAQLILRQEVAEAWGGRTALVRSVEISTEAVA--VSALQLPASRTPKQLSSVEASLRLD 189

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD---FDSTGNIKL 404
            +  AG   S ++    +++ A+++N S+I++   ++K  D    D  G +++
Sbjct: 190 AVASAGLGVSRSKMADWIRAGAVRVNWSVITSPSRELKQGDRVRLDGRGELEI 242


>gi|242556766|pdb|3HV0|A Chain A, Tryptophanyl-Trna Synthetase From Cryptosporidium Parvum
 gi|242556767|pdb|3HV0|B Chain B, Tryptophanyl-Trna Synthetase From Cryptosporidium Parvum
          Length = 393

 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 62/337 (18%), Positives = 113/337 (33%), Gaps = 60/337 (17%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
           F+ +    LS R F       + LD+     +   Y G   ++ SLH GHL   +   +L
Sbjct: 51  FRRNIF--LSHRDF------EKILDVYEKGELFYLYTGRGPSSESLHVGHLVPFLFTKYL 102

Query: 64  QKTGHKPISLMGGGTSIIGDPS--FRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKT 121
           Q T   P+ +      +  D    F+      +  +E               I  G    
Sbjct: 103 QDTFKVPLVI-----QLTDDEKFIFKSN----LTLEETHNYA---YENMKDIIACGFDPE 150

Query: 122 DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA 181
              +  N  ++  + Y D+LR       + + +S   ++S    + S +  +F +  +QA
Sbjct: 151 LTFIFTNLEYIAEL-YPDILR-------IEKKISCSQIKSIFGFKDSCNVGKFAFPAVQA 202

Query: 182 Y-----DFVELA---KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTAS 233
                  F  +     +  C +     DQ        D+  RL   K  ++ S  L +  
Sbjct: 203 APAFSSSFPHIFGGRTDIHCLVPH-AIDQDPYFRMVRDVAPRLGYLKPSSIHSIFLPSLQ 261

Query: 234 G--TKMGKTLSG-AIWLNKEMTSPYNFWQYW----------------RNIDDADVVSFAK 274
           G  TKM  ++   +I++N    S  N    +                 N+D      + +
Sbjct: 262 GSQTKMSASVQNSSIFVNDNEESIRNKIMKYAFSGGQATEEEQRRLGANLDVDVSWQYLR 321

Query: 275 RL--TTLPMSEIDRMAKLQGKEINEAKKIIATEITTM 309
            L      + EI +          E K I+  E+  +
Sbjct: 322 FLMEDDEKLEEIGKKYSSGEMLSGEIKSILVQELVKL 358


>gi|29349272|ref|NP_812775.1| tryptophanyl-tRNA synthetase II [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|253570382|ref|ZP_04847791.1| tryptophanyl-tRNA synthetase II [Bacteroides sp. 1_1_6]
 gi|298384811|ref|ZP_06994370.1| tryptophan--tRNA ligase [Bacteroides sp. 1_1_14]
 gi|29341180|gb|AAO78969.1| tryptophanyl-tRNA synthetase [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|251840763|gb|EES68845.1| tryptophanyl-tRNA synthetase II [Bacteroides sp. 1_1_6]
 gi|298261955|gb|EFI04820.1| tryptophan--tRNA ligase [Bacteroides sp. 1_1_14]
          Length = 366

 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 40/239 (16%), Positives = 71/239 (29%), Gaps = 41/239 (17%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN 102
            T   LH GH    +     LQ  G      +      I D      +  +   +++++N
Sbjct: 13  PTGR-LHIGHYVGSLKRRVDLQDAGDYSKMFI-----FIADSQ--ALTDNIDNPEKVRQN 64

Query: 103 IEKIKGIFSSFIKY-----GTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFE 157
           +          + Y        K    + +    LC + +  +     S    N  +  E
Sbjct: 65  V------IEVALDYLACGIDPSKATIFIQSQIPELCELSFYYMDLVSVSRLQRNPTVKSE 118

Query: 158 SVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK 217
                 +    + F  F Y I QA D     +     +   G DQ   +    ++  R  
Sbjct: 119 IQMRNFEASIPVGF--FTYPISQAADITA-FRATTVPV---GEDQEPMLEQAREIVRRFN 172

Query: 218 -------TPKLFALTSPL----LTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNI 264
                        L        L    G  KM K+L   I+L++E   P    +   ++
Sbjct: 173 YIYGETLVEPEILLPDNAACLRLPGTDGKAKMSKSLGNCIYLSEE---PEEIQKKIMSM 228


>gi|329945432|ref|ZP_08293195.1| tryptophan--tRNA ligase [Actinomyces sp. oral taxon 170 str. F0386]
 gi|328529054|gb|EGF55985.1| tryptophan--tRNA ligase [Actinomyces sp. oral taxon 170 str. F0386]
          Length = 370

 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 60/332 (18%), Positives = 92/332 (27%), Gaps = 50/332 (15%)

Query: 22  SNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL-FWLQKTGHKPISLMGGGTSI 80
           S   E DI  + G      G   T + +H GH    M     +Q  G     L+     +
Sbjct: 28  SAEIEADIAVNPGRYRMLTGVRPTGN-MHLGHYFGTMHSWKTIQDAGVDTWILVADY-QV 85

Query: 81  IGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDL 140
           I D       R  + S         +    S+          A+   N         +  
Sbjct: 86  ITDRDAVGPIRERVLSLVTDALAVGVDPQHSTIF-----AHSAVPAQN------QLMLPF 134

Query: 141 LREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGS 200
           L  +              + +     +++S L   Y + QA D +    N    L   G 
Sbjct: 135 LSLVTEAELHRNPTVKSELEA--TDGRAMSGLLLTYPVHQATDILFCQAN----LVPVGK 188

Query: 201 DQWGNIICGI--------DLGERLKTPKLF----ALTS--PLLTTASGTKMGKTLSGAIW 246
           DQ  ++              G  +K   +F    AL S  P+L    G KM K+    I 
Sbjct: 189 DQLPHLEQARLIAQRFDKRYGRAVKDRPVFRRPEALLSEAPMLLGLDGEKMSKSRRNTIE 248

Query: 247 LNKEMTSPYNFWQYWRNIDDA----------DVVSFAKRLTT---LPMSEIDRMAKLQGK 293
           L           +  +   D           +V +     +        EI       G 
Sbjct: 249 LGMSADETAKALKKAKTDSDRVITYDPTERPEVSNLLMLASLCGAGAPEEIAERIGDGGA 308

Query: 294 EINEAKKIIATEITTMVHGREEAEKAATAAME 325
                 K + TE          A +A  AA E
Sbjct: 309 GTL---KKVTTEAVNEFFAPIRARRAELAANE 337


>gi|322703849|gb|EFY95451.1| tyrosyl-tRNA synthetase [Metarhizium anisopliae ARSEF 23]
          Length = 384

 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 37/230 (16%), Positives = 80/230 (34%), Gaps = 21/230 (9%)

Query: 15  RGFIHQISNPRELDILCSQGV-VTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           R  + ++ NP  ++ +  +G     Y G   T    H G+    + +      G     L
Sbjct: 14  RENLAEVLNPEIIEKILDEGRHPKIYWGTATTGRP-HCGYFVPAIKIAQFLAAGCDVTIL 72

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK-YGTGKTDALMLNNETWL 132
           +      + +             + +++ +   + + ++ ++  G        +   ++ 
Sbjct: 73  LADIHGFLDNLKA--------PIELVEQRVHFYRYVITAMLEAVGVSTEKLRFVQGSSYQ 124

Query: 133 CSIKYIDLLREIGSFFSV--NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
            S +YI  + ++ S  S    +    E V+        +S L   Y +LQ  D   L   
Sbjct: 125 KSPEYIMDIYKLSSLISEHDAKRAGAEVVKQ--TANAPMSGL--LYPVLQVLDEQYL--- 177

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
            D   Q GG DQ        +   ++   +   L +P++    G KM  +
Sbjct: 178 -DVDAQFGGLDQRKLFTAAKEWLPKIGYKQRAHLLNPMVPGLQGGKMSSS 226


>gi|302553691|ref|ZP_07306033.1| tryptophanyl-tRNA synthetase [Streptomyces viridochromogenes DSM
           40736]
 gi|302471309|gb|EFL34402.1| tryptophanyl-tRNA synthetase [Streptomyces viridochromogenes DSM
           40736]
          Length = 337

 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 51/297 (17%), Positives = 92/297 (30%), Gaps = 47/297 (15%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSII--GDPSFRDESRRMMRSQE 98
           G   TA S H G+    +  +   +  H    ++    +I    DP     + R+  +Q 
Sbjct: 11  GIQPTAGSFHLGNYLGAVRQWVALQESHDAFYMVVDLHAITIPQDPKDLRANTRLAAAQL 70

Query: 99  IQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
           +   ++  +               A ++N  T       +   ++  +     R      
Sbjct: 71  LAAGLDPDRCTLFVQSHVPEHAQLAWVMNCLTGFGEASRMTQFKDKAAKQGAERA----- 125

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
                      S   F Y ILQ  D + L +  +  +   G DQ  ++    DL ER   
Sbjct: 126 -----------SVGLFTYPILQVADIL-LYQANEVPV---GEDQRQHVELTRDLAERFNG 170

Query: 219 --PKLFALTSPLLTTASGT---------KMGKTLSGAIWLNKEMTSPYNFWQYWRN-IDD 266
                F +  P +   +           KM K+ S    L   +  P    +  ++ + D
Sbjct: 171 RFGPTFTVPKPYILKETAKIYDLQDPSIKMSKSASTPKGLINLLDEPKTTAKKVKSAVTD 230

Query: 267 AD-VVSF-----------AKRLTTLPMSEIDRMAKL-QGKEINEAKKIIATEITTMV 310
            D V+ F               +TL    I  + +   GK     K  +A  +   V
Sbjct: 231 TDTVIRFDAAEKPGISNLLGIYSTLTGEGIAELEEKYAGKGYGALKTDLAEIMVDFV 287


>gi|153809087|ref|ZP_01961755.1| hypothetical protein BACCAC_03395 [Bacteroides caccae ATCC 43185]
 gi|149128420|gb|EDM19639.1| hypothetical protein BACCAC_03395 [Bacteroides caccae ATCC 43185]
          Length = 364

 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 40/239 (16%), Positives = 71/239 (29%), Gaps = 41/239 (17%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN 102
            T   LH GH    +     LQ  G      +      I D      +  +   +++++N
Sbjct: 13  PTGR-LHIGHYVGSLKRRVDLQDAGDYSKMFI-----FIADSQ--ALTDNIDNPEKVRQN 64

Query: 103 IEKIKGIFSSFIKY-----GTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFE 157
           +          + Y        K    + +    LC + +  +     S    N  +  E
Sbjct: 65  V------IEVALDYLACGIDPSKATIFIQSQIPELCELSFYYMDLVSVSRLQRNPTVKSE 118

Query: 158 SVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK 217
                 +    + F  F Y I QA D     +     +   G DQ   +    ++  R  
Sbjct: 119 IQMRNFEASIPVGF--FTYPISQAADITA-FRATTVPV---GEDQEPMLEQAREIVRRFN 172

Query: 218 -------TPKLFALTSPL----LTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNI 264
                        L        L    G  KM K+L   I+L++E   P    +   ++
Sbjct: 173 YIYGETLVEPEILLPDNAACLRLPGTDGKAKMSKSLGNCIYLSEE---PEEIQKKIMSM 228


>gi|148264300|ref|YP_001231006.1| tryptophanyl-tRNA synthetase [Geobacter uraniireducens Rf4]
 gi|146397800|gb|ABQ26433.1| tryptophanyl-tRNA synthetase [Geobacter uraniireducens Rf4]
          Length = 327

 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 51/318 (16%), Positives = 90/318 (28%), Gaps = 67/318 (21%)

Query: 41  GYDLTASSLHAGHL--TQLMLLFWLQKTGHKPISLMGGG----TSIIGDPSFRDESRRMM 94
           G   T   LH GH        L   Q+   +            T        RD  R   
Sbjct: 9   GMRPTGK-LHLGHFHGVLSNWLKLQQEF--ECFFFAADWHSLTTEYANTEGIRDSIR--- 62

Query: 95  RSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRML 154
             + + + +                K+   +         +     L  I S  +    L
Sbjct: 63  --EMVLDWLA---------FGIDPEKSTIFVQ------SQVPQHAELNLILSMITPVSWL 105

Query: 155 SFESVRSRLKRE---QSLSFLEFN-YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGI 210
                   ++     + LS   F  Y +L A D + + K     +   G DQ  ++    
Sbjct: 106 ERNPTYKEMQENLTAKDLSTFGFLGYPVLMASD-IIVYKAARVPV---GQDQIPHLEITR 161

Query: 211 DLGERLK-------TPKLFALT-SPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWR 262
           ++  R               LT +P +    G KM K+   AI+L+          +   
Sbjct: 162 EIARRFNYLYGEVFPEPAALLTETPKVLGLDGRKMSKSYGNAIFLSDNAEETR---KKVM 218

Query: 263 NIDDADVVSFAKR----------LTTLPM-------SEIDRMAKLQGKEINEAKKIIATE 305
           ++   DV    +            T   +       +EI    +       + KKI+A  
Sbjct: 219 SMV-TDVQRPLRTDPGEPDRCVAFTLHSLYVAEEKRAEIVASCRGAQIGCVDCKKILAQS 277

Query: 306 ITTMVHGREEAEKAATAA 323
           +   +     A++   AA
Sbjct: 278 VVDTL-SPFRAKREELAA 294


>gi|157414683|ref|YP_001481939.1| tryptophanyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           81116]
 gi|157385647|gb|ABV51962.1| tryptophanyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           81116]
 gi|307747323|gb|ADN90593.1| Tryptophanyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           M1]
          Length = 319

 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 33/215 (15%), Positives = 61/215 (28%), Gaps = 32/215 (14%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   +   LH G+    +      +   +    +    ++          +  +      
Sbjct: 6   GLQPSGD-LHIGNYFGAIKQMVDAQEKSQMFMFIANYHAMTSSQDGEKLKQNSL-KAAAA 63

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETW-LCSIKYIDLLREIGSFFSVNRMLSFESV 159
                I    S F      K    +     W L     + LL    S+         + V
Sbjct: 64  FLSLGIDPQKSVFWLQSDVKEVMELY----WILSQFTPMGLLERAHSY--------KDKV 111

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
              L     L    F+Y +L A D +     +D ++   G DQ  ++    D+  ++   
Sbjct: 112 AKGLSASHGL----FSYPVLMAADILL----FDTQIVPVGKDQIQHVEIARDIALKVNNE 163

Query: 220 KLFALTSP---------LLTTASGTKMGKTLSGAI 245
                T P         ++    G KM K+    I
Sbjct: 164 WGEIFTLPEAKVNEEVAVVVGTDGAKMSKSYQNTI 198


>gi|29376735|ref|NP_815889.1| tryptophanyl-tRNA synthetase II [Enterococcus faecalis V583]
 gi|227517126|ref|ZP_03947175.1| tryptophanyl-tRNA synthetase II [Enterococcus faecalis TX0104]
 gi|227555280|ref|ZP_03985327.1| tryptophanyl-tRNA synthetase II [Enterococcus faecalis HH22]
 gi|257419781|ref|ZP_05596775.1| tryptophanyl-tRNA synthetase [Enterococcus faecalis T11]
 gi|29344200|gb|AAO81959.1| tryptophanyl-tRNA synthetase [Enterococcus faecalis V583]
 gi|227075440|gb|EEI13403.1| tryptophanyl-tRNA synthetase II [Enterococcus faecalis TX0104]
 gi|227175602|gb|EEI56574.1| tryptophanyl-tRNA synthetase II [Enterococcus faecalis HH22]
 gi|257161609|gb|EEU91569.1| tryptophanyl-tRNA synthetase [Enterococcus faecalis T11]
 gi|315574672|gb|EFU86863.1| tryptophan--tRNA ligase [Enterococcus faecalis TX0309B]
 gi|315581022|gb|EFU93213.1| tryptophan--tRNA ligase [Enterococcus faecalis TX0309A]
          Length = 334

 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 55/343 (16%), Positives = 102/343 (29%), Gaps = 57/343 (16%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSF-RDESRRMMRSQEIQEN 102
            T   LH GH    +      +        +     +I D     D +R     +++  N
Sbjct: 10  PTGK-LHLGHYVGSLKKRVEMQADPTNQLFV-----MIADLQALTDNARNP---EKVSAN 60

Query: 103 IEKIKGIFSSFIKY-----GTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFE 157
           +          + Y        KT   + +    L  +    L     S    N  +  E
Sbjct: 61  V------LEVALDYLAVGLDPTKTTIFIQSQIPQLAELTMYYLNLVTTSRVRRNPTVKAE 114

Query: 158 SVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK 217
             + +        F  F Y + QA D       +   L   G DQ   +    ++     
Sbjct: 115 IEQKKFGEGVPTGF--FIYPVSQAADITA----FQANLVPVGEDQKPMLEQAQEIVHSFN 168

Query: 218 TPKLFALTSP----------LLTTASGT-KMGKTLSGAIWLNKEMT--SPYNFWQYW--- 261
                 L  P           L    G  KM K+L   I+L+             Y    
Sbjct: 169 QTYGEVLVRPEAVLPPKGMGRLPGIDGNGKMSKSLGNGIYLSDPAEVVQKKVMSMYTDPN 228

Query: 262 -RNIDD------ADVVSFAKRL--TTLPMSEIDRMAKLQGKEINEAKK----IIATEITT 308
              I+D        V ++          + E+    +  G    + K+    ++  E+  
Sbjct: 229 HIRIEDPGQVEGNMVFTYLDVFGKNKEYIEELKEHYRHGGLGDVKIKRYLIDVLEEELAP 288

Query: 309 MVHGREEAEKAATAAME-CFDMSIHSQHMPTISISKDEVSRGM 350
           +   REE  K   A ME     S+ ++ +   ++++ + + G+
Sbjct: 289 IRRRREELAKNPEAIMEMLHKGSLAAEKVAAQTLTEVKKAMGI 331


>gi|118580108|ref|YP_901358.1| tryptophanyl-tRNA synthetase [Pelobacter propionicus DSM 2379]
 gi|118502818|gb|ABK99300.1| tryptophanyl-tRNA synthetase [Pelobacter propionicus DSM 2379]
          Length = 326

 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 54/314 (17%), Positives = 93/314 (29%), Gaps = 51/314 (16%)

Query: 41  GYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGG----TSIIGDPSFRDESRRMMR 95
           G   T   LH GH    L     +Q    +    +       T      + RD  R    
Sbjct: 8   GMRPTGR-LHIGHFHGVLENWIRIQDQ-MECFFFVADWHSLTTEYADTAAIRDNIR---- 61

Query: 96  SQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLS 155
            + + + +        + +   +       LN    L  I  +  L       +   ML 
Sbjct: 62  -EMVLDWVAFGLDPEKTVVFRQSLVPHHAELN--LILSMITPVSWLE---RNPTFKEML- 114

Query: 156 FESVRSRLKREQSLSFLEFN-YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
            ++++ R      LS   F  Y +L A D + L K     +   G DQ  ++    ++  
Sbjct: 115 -DNIQQR-----DLSTFGFLGYPVLMAAD-IILYKATRVPV---GQDQLPHLEITREIAR 164

Query: 215 RLKT-------PKLFALT-SPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNID- 265
           R               LT +P L    G KM K+ + +I+L+          +       
Sbjct: 165 RFNHLYGQVFPEPAALLTETPKLLGLDGRKMSKSYNNSIYLSDTAEETEKKIKSMMTDPA 224

Query: 266 --------DADVVSFAKR----LTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGR 313
                   D +V          +      EI    +       E KKI+A  +   +   
Sbjct: 225 RMRRSDAGDPEVCVAFNLHRIYVPQEQQDEIVPACRNASIGCVECKKILAKYLNERL-AP 283

Query: 314 EEAEKAATAAMECF 327
             A++        F
Sbjct: 284 FRAKRVELTQKSDF 297


>gi|298480183|ref|ZP_06998381.1| tryptophan--tRNA ligase [Bacteroides sp. D22]
 gi|298273464|gb|EFI15027.1| tryptophan--tRNA ligase [Bacteroides sp. D22]
          Length = 364

 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 40/239 (16%), Positives = 71/239 (29%), Gaps = 41/239 (17%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN 102
            T   LH GH    +     LQ  G      +      I D      +  +   +++++N
Sbjct: 13  PTGR-LHIGHYVGSLKRRVDLQNAGDYSKMFI-----FIADSQ--ALTDNIDNPEKVRQN 64

Query: 103 IEKIKGIFSSFIKY-----GTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFE 157
           +          + Y        K    + +    LC + +  +     S    N  +  E
Sbjct: 65  V------IEVALDYLACGIDPTKATIFIQSQIPELCELSFYYMDLVSVSRLQRNPTVKSE 118

Query: 158 SVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK 217
                 +    + F  F Y I QA D     +     +   G DQ   +    ++  R  
Sbjct: 119 IQMRNFEASIPVGF--FTYPISQAADITA-FRATTVPV---GEDQEPMLEQAREIVRRFN 172

Query: 218 -------TPKLFALTSPL----LTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNI 264
                        L        L    G  KM K+L   I+L++E   P    +   ++
Sbjct: 173 YIYGETLVEPEILLPDNAACLRLPGTDGKAKMSKSLGNCIYLSEE---PEEIQKKIMSM 228


>gi|89053708|ref|YP_509159.1| pseudouridine synthase, Rsu [Jannaschia sp. CCS1]
 gi|88863257|gb|ABD54134.1| Pseudouridine synthase Rsu [Jannaschia sp. CCS1]
          Length = 296

 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 11/50 (22%), Positives = 23/50 (46%), Gaps = 1/50 (2%)

Query: 348 RGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
            G  +   + +AG   S  EA R +++  + +N ++I +  L +   D  
Sbjct: 3   DGERIAKRLSRAG-VASRREAERMIEAGRVSVNGAVIESPALNVTDADVI 51


>gi|53803381|ref|YP_114937.1| tryptophanyl-tRNA synthetase [Methylococcus capsulatus str. Bath]
 gi|53757142|gb|AAU91433.1| tryptophanyl-tRNA synthetase [Methylococcus capsulatus str. Bath]
          Length = 338

 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 36/209 (17%), Positives = 67/209 (32%), Gaps = 22/209 (10%)

Query: 50  HAGHLTQLMLLFWLQKTGH--KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIK 107
           H G+    +         H  +P   +    ++I      D  R    + EI  +   + 
Sbjct: 18  HLGNYVGAIRPAIEASHDHTVQPYYFLADYHALI---KCHDPERVRQSTLEIAASWLALG 74

Query: 108 GIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ 167
               + I Y       ++    TW+ +      L      +      + E        ++
Sbjct: 75  LDTRNAIFYRQSDVPEIVE--LTWMLTCVTAKGLMNRAHAYKAAVQANQE--ADEADPDK 130

Query: 168 SLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--------- 218
            ++   FNY +L A D + L   +   +   G DQ  +I    D+G+R            
Sbjct: 131 GITMGLFNYPVLMAADIL-LFNAHKVPV---GRDQVQHIEMARDIGQRFNHIFGEHFVLP 186

Query: 219 PKLFALTSPLLTTASGTKMGKTLSGAIWL 247
             +    + +L    G KM K+    I L
Sbjct: 187 EAVVNEETAVLQGLDGRKMSKSYDNTIPL 215


>gi|73749027|ref|YP_308266.1| tryptophanyl-tRNA synthetase [Dehalococcoides sp. CBDB1]
 gi|73660743|emb|CAI83350.1| tryptophanyl-tRNA synthetase [Dehalococcoides sp. CBDB1]
          Length = 323

 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 42/299 (14%), Positives = 94/299 (31%), Gaps = 53/299 (17%)

Query: 37  TAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRS 96
             + G   T   LH G+    +  +   +  ++ I  +    +             +   
Sbjct: 3   RVFSGVRPTGR-LHLGNYLGAVKNYVALQDDYECIYCVVDLHA-------------LTTL 48

Query: 97  QEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSF 156
           +E     E I  +    +  G      ++          +  +L    G    ++ +L  
Sbjct: 49  EETATLKENIYEMMLDLLASGLDPKKCILFVQSQ---VPEINELFTLFGMITPLSWLLRV 105

Query: 157 ESVRSRLK-REQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER 215
            + + ++K    ++++    Y +LQA D       Y   +   G DQ  ++    ++  R
Sbjct: 106 PTFKEKVKMHPDNVNYGLVGYPVLQAADI----SLYKADVVPVGVDQLPHLELTREIVRR 161

Query: 216 LKTP-------KLFALT-SPLLTTASGT-KMGKTLSGAI--WLNKEMTSPYNFWQYWRN- 263
                          LT  P +    G  KM K+L+  I   L++E T+     +   + 
Sbjct: 162 FNEKFGDTFPEPQARLTNFPTVVGLDGKDKMSKSLNNHIELALSEEETA-----KKVMSA 216

Query: 264 IDDA--------------DVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITT 308
           + D               +V       +   +++I    +       + K+ +A  I  
Sbjct: 217 VTDPARQYKTDPGHPNICNVYKLHNYFSPQAVAQITDDCQNARIGCVQCKRALAEAINA 275


>gi|255711504|ref|XP_002552035.1| KLTH0B05698p [Lachancea thermotolerans]
 gi|238933413|emb|CAR21597.1| KLTH0B05698p [Lachancea thermotolerans]
          Length = 480

 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 24/122 (19%), Positives = 42/122 (34%), Gaps = 10/122 (8%)

Query: 299 KKIIATEITTMVHGREEAEKAATA-------AMECFDMSIHSQHMPTISISKDEVSRGMG 351
           +K  A + T   HG    E            ++   D S+    +    I     +    
Sbjct: 44  QKWTAKQETRAYHGEHMTEGRWQTTFTPKLDSVAQLDASLKGGEIDQTPILLQTFAVLEK 103

Query: 352 LLT-LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD-FDSTGNIKLSF-GK 408
            L   + +A FA+S  +AR+ +    + +N   I+     +K  D F+      L   G 
Sbjct: 104 RLDFALFRAMFASSVRQARQFILHGNVFVNGIKITQPGYPLKAGDVFNVKPEKVLQALGA 163

Query: 409 KN 410
           K 
Sbjct: 164 KK 165


>gi|209966844|ref|YP_002299759.1| RNA pseudouridine synthase, putative [Rhodospirillum centenum SW]
 gi|209960310|gb|ACJ00947.1| RNA pseudouridine synthase, putative [Rhodospirillum centenum SW]
          Length = 551

 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 11/66 (16%), Positives = 26/66 (39%), Gaps = 1/66 (1%)

Query: 332 HSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
           H +  P  + S  +   G  +   + +AG   S  +A R +    + +N  ++    + +
Sbjct: 13  HPEDGPDATASAPDDQGGERISKRLSRAGLC-SRRDAERWIAEGRVSVNGRVLDTPAVTV 71

Query: 392 KLQDFD 397
           +  D  
Sbjct: 72  RPGDRI 77


>gi|160882401|ref|ZP_02063404.1| hypothetical protein BACOVA_00350 [Bacteroides ovatus ATCC 8483]
 gi|237719072|ref|ZP_04549553.1| tryptophanyl-tRNA synthetase II [Bacteroides sp. 2_2_4]
 gi|260171995|ref|ZP_05758407.1| tryptophanyl-tRNA synthetase II [Bacteroides sp. D2]
 gi|293369510|ref|ZP_06616089.1| tryptophan--tRNA ligase [Bacteroides ovatus SD CMC 3f]
 gi|299148155|ref|ZP_07041217.1| tryptophan--tRNA ligase [Bacteroides sp. 3_1_23]
 gi|315920308|ref|ZP_07916548.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|156112214|gb|EDO13959.1| hypothetical protein BACOVA_00350 [Bacteroides ovatus ATCC 8483]
 gi|229451451|gb|EEO57242.1| tryptophanyl-tRNA synthetase II [Bacteroides sp. 2_2_4]
 gi|292635395|gb|EFF53908.1| tryptophan--tRNA ligase [Bacteroides ovatus SD CMC 3f]
 gi|298512916|gb|EFI36803.1| tryptophan--tRNA ligase [Bacteroides sp. 3_1_23]
 gi|313694183|gb|EFS31018.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 364

 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 40/239 (16%), Positives = 71/239 (29%), Gaps = 41/239 (17%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN 102
            T   LH GH    +     LQ  G      +      I D      +  +   +++++N
Sbjct: 13  PTGR-LHIGHYVGSLKRRVDLQNAGDYSKMFI-----FIADSQ--ALTDNIDNPEKVRQN 64

Query: 103 IEKIKGIFSSFIKY-----GTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFE 157
           +          + Y        K    + +    LC + +  +     S    N  +  E
Sbjct: 65  V------IEVALDYLACGIDPSKATIFIQSQIPELCELSFYYMDLVSVSRLQRNPTVKSE 118

Query: 158 SVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK 217
                 +    + F  F Y I QA D     +     +   G DQ   +    ++  R  
Sbjct: 119 IQMRNFEASIPVGF--FTYPISQAADITA-FRATTVPV---GEDQEPMLEQAREIVRRFN 172

Query: 218 -------TPKLFALTSPL----LTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNI 264
                        L        L    G  KM K+L   I+L++E   P    +   ++
Sbjct: 173 YIYGETLVEPEILLPDNAACLRLPGTDGKAKMSKSLGNCIYLSEE---PEEIQKKIMSM 228


>gi|86151397|ref|ZP_01069612.1| tryptophanyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           260.94]
 gi|86153784|ref|ZP_01071987.1| tryptophanyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           HB93-13]
 gi|121613675|ref|YP_001000099.1| tryptophanyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           81-176]
 gi|167005057|ref|ZP_02270815.1| tryptophanyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           81-176]
 gi|315123948|ref|YP_004065952.1| tryptophanyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
 gi|85841744|gb|EAQ58991.1| tryptophanyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           260.94]
 gi|85842745|gb|EAQ59957.1| tryptophanyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           HB93-13]
 gi|87250172|gb|EAQ73130.1| tryptophanyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           81-176]
 gi|315017670|gb|ADT65763.1| tryptophanyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
          Length = 319

 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 33/215 (15%), Positives = 61/215 (28%), Gaps = 32/215 (14%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   +   LH G+    +      +   +    +    ++          +  +      
Sbjct: 6   GLQPSGD-LHIGNYFGAIKQMVDAQEKSQMFMFIANYHAMTSSQDGEKLKQNSL-KAAAA 63

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETW-LCSIKYIDLLREIGSFFSVNRMLSFESV 159
                I    S F      K    +     W L     + LL    S+         + V
Sbjct: 64  FLSLGIDPQKSVFWLQSDVKEVMELY----WILSQFTPMGLLERAHSY--------KDKV 111

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
              L     L    F+Y +L A D +     +D ++   G DQ  ++    D+  ++   
Sbjct: 112 AKGLSASHGL----FSYPVLMAADILL----FDTQIVPVGKDQIQHVEIARDIALKVNNE 163

Query: 220 KLFALTSP---------LLTTASGTKMGKTLSGAI 245
                T P         ++    G KM K+    I
Sbjct: 164 WGEIFTLPEAKVNEEVAVVVGTDGAKMSKSYQNTI 198


>gi|261199522|ref|XP_002626162.1| tyrosyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081]
 gi|239594370|gb|EEQ76951.1| tyrosyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081]
          Length = 410

 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 37/195 (18%), Positives = 57/195 (29%), Gaps = 21/195 (10%)

Query: 50  HAGHLTQLMLLFWLQKTGHKPISLMGGGTSII---GDPSFRDESRRMMRSQEIQENIEKI 106
           H G+   ++ L    + G     L+      +     P      R       I   +E I
Sbjct: 65  HCGYFCPIVKLAHFLRAGCHVKILLADIHGFLDNLKAPIDLVNFRAKYYRYVITALLEAI 124

Query: 107 KGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSV-NRMLSFESVRSRLKR 165
                                    L     +DL R          +    E V+     
Sbjct: 125 HVPIDKLEFVLGSDFQ---------LSPKYTMDLFRLSSVVTEHDAKKAGAEVVKQ--VD 173

Query: 166 EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALT 225
              LS L   Y ++QA D   L    D   Q GG DQ       ++   R+   +   L 
Sbjct: 174 NAPLSGL--IYPLMQALDEEHL----DVDAQFGGVDQRKIFTLALETLPRIGYKERAHLM 227

Query: 226 SPLLTTASGTKMGKT 240
           SP++   +G KM  +
Sbjct: 228 SPMVPGLAGGKMSAS 242


>gi|194749165|ref|XP_001957010.1| GF10209 [Drosophila ananassae]
 gi|190624292|gb|EDV39816.1| GF10209 [Drosophila ananassae]
          Length = 525

 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 53/294 (18%), Positives = 90/294 (30%), Gaps = 32/294 (10%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R    +     +L  + ++  +  Y G   T    H  +   +  +    K G +  
Sbjct: 12  LITRNL-QETLGDDKLTKILAERDLKIYWGTATTGKP-HVAYFVPMSKIADFLKAGCEVT 69

Query: 72  SLMGGGTSII---GDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
            L     + +     P    E R     Q I+  +  I       +K+  G         
Sbjct: 70  ILFADLHAYLDNMKAPWSLLELRTQYYEQVIKAMLSSIGVPLEK-LKFVKGSDYQ----- 123

Query: 129 ETWLCSIKYIDLLREIGSFFSV-NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
              L     +D+ +          +    E V+   + E  L      Y  LQA D   L
Sbjct: 124 ---LSKEYTLDVYKLSSVVTQHDAKKAGAEVVK---QVEYPL-LSGLLYPGLQALDEEYL 176

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
                   Q GG DQ            +L   K     +P++   +G KM  +   +   
Sbjct: 177 K----VDAQFGGVDQRKIFTFSEKYLPQLGYEKRIHFMNPMVPGLAGGKMSSSEEDS--K 230

Query: 248 NKEMTSPYNFWQYWR-------NIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE 294
              + SP N  +  +       NI D  ++SF K +      E +     +G E
Sbjct: 231 IDLLDSPANVKKKLKKAFCEPGNIADNGLLSFVKHVLFSLFKEGEGFEVNRGAE 284


>gi|312099257|ref|XP_003149299.1| tryptophanyl-tRNA synthetase [Loa loa]
 gi|307755536|gb|EFO14770.1| tryptophanyl-tRNA synthetase [Loa loa]
          Length = 338

 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 24/115 (20%), Positives = 39/115 (33%), Gaps = 1/115 (0%)

Query: 15  RGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +    LD L  +     Y G   ++ SLH GHL   +   WLQ     P+ +
Sbjct: 4   RGLFFAHRDLSLILDRLEQKKPFYLYTGRGPSSGSLHLGHLIPFVFTKWLQDVFDVPLII 63

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
                      +   +  + M ++ I++ I        +FI   T         N
Sbjct: 64  QITDDEKFLWKNHTLDEIKRMANENIKDIIACGFSPDKTFIFLDTEYMCPSFFTN 118


>gi|325269569|ref|ZP_08136185.1| tryptophan--tRNA ligase [Prevotella multiformis DSM 16608]
 gi|325853509|ref|ZP_08171341.1| tryptophan--tRNA ligase [Prevotella denticola CRIS 18C-A]
 gi|327313154|ref|YP_004328591.1| tryptophan--tRNA ligase [Prevotella denticola F0289]
 gi|324988188|gb|EGC20155.1| tryptophan--tRNA ligase [Prevotella multiformis DSM 16608]
 gi|325484313|gb|EGC87241.1| tryptophan--tRNA ligase [Prevotella denticola CRIS 18C-A]
 gi|326945139|gb|AEA21024.1| tryptophan--tRNA ligase [Prevotella denticola F0289]
          Length = 362

 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 43/300 (14%), Positives = 84/300 (28%), Gaps = 61/300 (20%)

Query: 44  LTASSLHAGHLTQLMLLFW---LQKTGH--KPISLMGGGTSIIGDPSFRDESRRMMRSQE 98
            T   LH GH      L     LQ  G   K    M    ++  +    ++ R+      
Sbjct: 11  PTGK-LHLGHYVG--SLRRRVELQNLGDYDKMFVFMADVQALTDNADNPEKIRQ----NI 63

Query: 99  IQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
           I+  ++ +    +        K    + +    L  +     +  +              
Sbjct: 64  IEVALDYLSAGLT------PEKCVLYIQSQIPELAELTTY-FMNLVSVSRVQRNPTVKTE 116

Query: 159 VRSR-LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK 217
           ++ R  +    + F  F Y + QA D           +  G  DQ   +    ++  R  
Sbjct: 117 IKMRNFEANIPMGF--FAYPVSQAADIAAFKA---TTVPAG-EDQEPMLEVTREIVRRFN 170

Query: 218 TPKLFALTSP------------LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYW---- 261
                 L  P            L  T    KM K+L   I+L+ +  + +   +      
Sbjct: 171 QIYAPVLVEPNIMLPENATARRLPGTDGKEKMSKSLGNCIYLSDDADTVWKKVKTMYTDP 230

Query: 262 --RNIDD------ADVVSFAKRLT-----------TLPMSEIDRMAKLQGKEINEAKKII 302
              N+ D        V ++    +              + E+       G    + KK++
Sbjct: 231 AHLNVSDPGHVEGNAVFTYLDAFSTDEDFAEFWPEFKNLDELKAAYTAGGIGDMKCKKLL 290


>gi|300310847|ref|YP_003774939.1| tryptophanyl-tRNA synthetase [Herbaspirillum seropedicae SmR1]
 gi|300073632|gb|ADJ63031.1| tryptophanyl-tRNA synthetase protein [Herbaspirillum seropedicae
           SmR1]
          Length = 344

 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 37/219 (16%), Positives = 65/219 (29%), Gaps = 29/219 (13%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
            T   LH GH    +      +   +   L+    ++       +  R    +  + E  
Sbjct: 22  PTGP-LHLGHYIGSLKSRVALQETSRQFLLLADTQAMTD-----NVGRHQKVTDNVLEVA 75

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR- 162
                +          K+   + +    L  +  + LL  +            E +R R 
Sbjct: 76  LDYLAVG-----IDPEKSTIFIQSQVRELYELSMV-LLNLVTVSRLERNPTIKEEIRLRG 129

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL------ 216
            +R+    FL   Y + QA D           L   GSDQ   I    +L  +       
Sbjct: 130 FERDIPAGFL--TYPVSQAADITAFKGQ----LVPVGSDQLPMIEQTNELVRKFNATVDR 183

Query: 217 ----KTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
               +  ++ + T  L       KM K+L  +I L    
Sbjct: 184 EVLVECKEVLSETGRLPGIDGKAKMSKSLGNSIALGATP 222


>gi|195328139|ref|XP_002030774.1| GM24400 [Drosophila sechellia]
 gi|194119717|gb|EDW41760.1| GM24400 [Drosophila sechellia]
          Length = 498

 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 53/314 (16%), Positives = 93/314 (29%), Gaps = 32/314 (10%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R    +     +L  + ++  +  Y G   T    H  +   +  +    K G +  
Sbjct: 12  LITRNL-QETLGDDKLTKILAERDLKIYWGTATTGKP-HVAYFVPMSKIADFLKAGCEVT 69

Query: 72  SLMGGGTSII---GDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
            L     + +     P    E R     Q I+  +  I       +K+  G         
Sbjct: 70  ILFADLHAYLDNMKAPWSLLELRTQYYEQVIKAMLSAIGVPLEK-LKFVKGSDYQ----- 123

Query: 129 ETWLCSIKYIDLLREIGSFFSV-NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
              L     +D+ +          +    E V+   + E  L      Y  LQA D   L
Sbjct: 124 ---LSKEYTLDVYKLSSVVTQHDAKKAGAEVVK---QVEYPL-LSGLLYPGLQALDEEYL 176

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
                   Q GG DQ            +L   K     +P++   +G KM  +   +   
Sbjct: 177 K----VDAQFGGVDQRKIFTFSEKYLPQLGYEKRIHFMNPMVPGLAGGKMSSSEEDS--K 230

Query: 248 NKEMTSPYNFWQYWR-------NIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
              + SP N  +  +       NI D  ++SF K +      E +     +  E      
Sbjct: 231 IDLLDSPANVKKKLKKAFCEPGNIADNGLLSFVKHVLFSLFKEGEGFEVNREAEHGGDVT 290

Query: 301 IIATEITTMVHGRE 314
            +  E     +  +
Sbjct: 291 FLKYEDLEKYYAED 304


>gi|171677871|ref|XP_001903886.1| hypothetical protein [Podospora anserina S mat+]
 gi|170937004|emb|CAP61662.1| unnamed protein product [Podospora anserina S mat+]
          Length = 397

 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 44/245 (17%), Positives = 80/245 (32%), Gaps = 39/245 (15%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
            K +    L+E   I ++ +          G    Y G   T    H G+L   + +   
Sbjct: 15  IKENLAEFLNE-EIIKKVVDE--------GGHPKIYWGTATTGRP-HCGYLVPAIKMAQF 64

Query: 64  QKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK---YGTGK 120
              G +   L+      +      D  +  +  + +    E  +   S+ +      T K
Sbjct: 65  LAAGCELTVLLADIHGFL------DNLKAPL--ELVMHRAEFYRYTISTLLGAVGVSTEK 116

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSV-----NRMLSFESVRSRLKREQSLSFLEFN 175
              ++ ++       K  + + ++    S+      +    E V+        LS L   
Sbjct: 117 LKIVLGSSYQ-----KSAEYVMDVYKMASIISEHDAKKAGAEIVKQ--TDNAPLSGL--L 167

Query: 176 YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT 235
           Y ILQ  D   L    D   Q GG DQ    I   +   +L   +   L +P++    G 
Sbjct: 168 YPILQVLDEQYL----DVDAQFGGVDQRKLFIAAKEWLPKLGYKERAHLMNPMVPGLHGG 223

Query: 236 KMGKT 240
           KM  +
Sbjct: 224 KMSSS 228


>gi|323144677|ref|ZP_08079262.1| tryptophan--tRNA ligase [Succinatimonas hippei YIT 12066]
 gi|322415573|gb|EFY06322.1| tryptophan--tRNA ligase [Succinatimonas hippei YIT 12066]
          Length = 356

 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 38/236 (16%), Positives = 72/236 (30%), Gaps = 35/236 (14%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGH--KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +     LQ +G+  K   ++    ++  +    ++ R+ +    + 
Sbjct: 11  PTGR-LHVGHYVGSLKERVALQNSGNYDKVFIMIADAQALTDNAEHPEKVRQNIMQVALD 69

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
                I    S        +  A +         +  + + R        N  +  E  +
Sbjct: 70  YLSCGIDPNKSCIFIQSMVRELAELAFYY-----MNLVTVAR-----VQRNPTVKNEIKQ 119

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT-- 218
              +    L F  F+Y + QA D     +     +   G DQ   I    ++  +     
Sbjct: 120 KNFEASIPLGF--FSYPVSQAADITA-FRATTVPV---GEDQEPMIEQCREIVRKFNEIY 173

Query: 219 -----PKLFAL----TSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNI 264
                     L        L    G  KM K+L   I+L+ E   P    +   ++
Sbjct: 174 GETLVEPEIVLPSNKACLRLPGIDGKAKMSKSLGNCIYLSDE---PDVIKKKIMSM 226


>gi|84501543|ref|ZP_00999715.1| RNA pseudouridylate synthase family protein [Oceanicola batsensis
           HTCC2597]
 gi|84390164|gb|EAQ02723.1| RNA pseudouridylate synthase family protein [Oceanicola batsensis
           HTCC2597]
          Length = 331

 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 10/52 (19%), Positives = 23/52 (44%), Gaps = 1/52 (1%)

Query: 342 SKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL 393
             ++   G  +  ++ +AG   S  EA R +    I ++ ++I +  L +  
Sbjct: 4   PPEKPPAGDRIAKVLARAG-VASRREAERMIAEGRISVDGTVIDSPALNVTA 54


>gi|332519519|ref|ZP_08395986.1| tryptophanyl-tRNA synthetase [Lacinutrix algicola 5H-3-7-4]
 gi|332045367|gb|EGI81560.1| tryptophanyl-tRNA synthetase [Lacinutrix algicola 5H-3-7-4]
          Length = 326

 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 36/221 (16%), Positives = 65/221 (29%), Gaps = 33/221 (14%)

Query: 50  HAGHLT--QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIK 107
           H G++    +  +       ++    +    S+        E+ R          +    
Sbjct: 19  HLGNILGALIPAMALANDASNESYLFIADMHSLTQIKDG--ETLRNNTYSTAATWLALGL 76

Query: 108 GIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ 167
            I ++     +       L   TW            +  FF   R+    S + +  R  
Sbjct: 77  DIENTVFYRQSDIPQTTEL---TWY-----------LSCFFPYQRLTLAHSFKDKADRLD 122

Query: 168 SLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSP 227
            ++   F Y +L A D +     YD  +   G DQ  +I    D+  R  T        P
Sbjct: 123 DVNAGLFTYPMLMAADILL----YDAEIIPVGKDQLQHIEMTRDVASRFHTKMGDTFVIP 178

Query: 228 ---------LLTTASGTKMGKTLSG--AIWLNKEMTSPYNF 257
                    L+    G KM K+      I+L ++       
Sbjct: 179 EAKIQEQTKLIPGTDGAKMSKSKGNTINIFLPEKKLRKQIM 219


>gi|206602359|gb|EDZ38840.1| Tryptophanyl-tRNA synthetase [Leptospirillum sp. Group II '5-way
           CG']
          Length = 355

 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 37/220 (16%), Positives = 75/220 (34%), Gaps = 51/220 (23%)

Query: 176 YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKLFALTSPLLT--- 230
           Y +L + D + L +     +   G DQ  ++    ++  RL+     +     PLLT   
Sbjct: 152 YPVLMSADIL-LYRADHVPV---GLDQLPHLELAREIARRLRHFYGPVVPEPLPLLTPTP 207

Query: 231 ---TASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNID---------DAD---VVSFAKR 275
                 G KM K+    I++       +   +               D D   V +  + 
Sbjct: 208 RLLGLDGRKMSKSYKNCIYVGDSSAEVWEKVRPMMTDPARVRRSDPGDPDKCPVFNLHQS 267

Query: 276 LT-TLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQ 334
            + +  + E+D+  +  G    + KK++   I  ++    E ++   +A + F       
Sbjct: 268 FSPSETVQEVDKGCRTAGIGCIDCKKLLVGHIERILQPARE-KRQEISARKGF------- 319

Query: 335 HMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKS 374
                            L  ++ + G   S  EARR ++ 
Sbjct: 320 -----------------LKEVLREGGKTAS-GEARRTIRE 341


>gi|240849166|ref|NP_001155620.1| tryptophanyl-tRNA synthetase-like [Acyrthosiphon pisum]
 gi|239791875|dbj|BAH72348.1| ACYPI005300 [Acyrthosiphon pisum]
          Length = 403

 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 59/339 (17%), Positives = 113/339 (33%), Gaps = 49/339 (14%)

Query: 2   PAFKSDFLSILSERGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLL 60
            A K      L  RG      +   +  L  QG     Y G   +++SLH GHL   +  
Sbjct: 59  TATKKPVHHFLK-RGIFFSHRDLYSILNLYEQGKPFYLYTGRGPSSNSLHIGHLIPFIFT 117

Query: 61  FWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGK 120
            WLQ   + P+ +              D+ + + +   ++E            I  G  K
Sbjct: 118 KWLQDAFNVPLVI-----------QLTDDEKYLWKDLTLEEAKRLSVENAKDIIACGFDK 166

Query: 121 TDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ 180
            +  + ++  ++             +   + + ++F  V+       S    +  +  +Q
Sbjct: 167 KNTFIFSDLQFMGECPSF-----YANVLRIQKSVTFNQVKGIFGFGDSDVIGKIAFPAVQ 221

Query: 181 A-------YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK---LFALTSPLLT 230
           A       + F+       C +     DQ        D+  +L   K   + +   P L 
Sbjct: 222 AAPCLSSTFPFIFGDVKVPCLVPC-AIDQDPYFRMTRDVAPKLGFSKPALIHSSFLPSLQ 280

Query: 231 TASGTKMGKT-LSGAIWL------NKEMTSPYNFWQYWRNID-------DADV---VSFA 273
            A  TKM  + L+ +I+L       K   + Y F      ++       D +V     + 
Sbjct: 281 GAD-TKMSASDLNSSIYLKDTPKEIKNKINKYAFSGGQGTVELHREKGGDCNVDISYQYL 339

Query: 274 KRL--TTLPMSEIDRMAKLQGKEINEAKKIIATEITTMV 310
           K    +   + +I++          E KKI+   I+ +V
Sbjct: 340 KHFLESDEELIKIEKAYTSGKMLTGELKKILIESISKIV 378


>gi|308805238|ref|XP_003079931.1| probable tyrosine-tRNA ligase (ISS) [Ostreococcus tauri]
 gi|116058388|emb|CAL53577.1| probable tyrosine-tRNA ligase (ISS) [Ostreococcus tauri]
          Length = 396

 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 42/228 (18%), Positives = 82/228 (35%), Gaps = 21/228 (9%)

Query: 19  HQISNPRELDILCSQGVVTA-YIGYDLTASSLHA--GHLTQLMLLFWLQKTGHKPISLMG 75
            +   P EL  L  +  V   Y G++ +   +H   G +  L +   L K G K    + 
Sbjct: 43  EECVQPDELRKLLEKKPVPVCYDGFEPSGR-MHIAQGVMKALNVNK-LTKIGCKFKFWVA 100

Query: 76  GGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSI 135
              +++ +    D  +       + E  + I     + +++     +      E W    
Sbjct: 101 DWFALMNNKMGGDLKKIQKVGAYMVEVWKAIGMDLEN-VEFVWSSEEINSRAGEYWP--- 156

Query: 136 KYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRL 195
               L+ +I     + R+L    +  R + ++ LS  +  Y  +Q  D   L  +  C+L
Sbjct: 157 ----LVLDIARKNKLARILRCSQIMGRSESDE-LSASQIFYPCMQCADIFFLGADI-CQL 210

Query: 196 QMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLLTT--ASGTKMGKT 240
              G DQ    +   +  + +K   K   L+  +L        KM K+
Sbjct: 211 ---GMDQRKVNMLAREYCDDIKRKNKPIILSHHMLMGLKQGQEKMSKS 255


>gi|332291719|ref|YP_004430328.1| tryptophanyl-tRNA synthetase [Krokinobacter diaphorus 4H-3-7-5]
 gi|332169805|gb|AEE19060.1| tryptophanyl-tRNA synthetase [Krokinobacter diaphorus 4H-3-7-5]
          Length = 323

 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 33/164 (20%), Positives = 55/164 (33%), Gaps = 28/164 (17%)

Query: 144 IGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQW 203
           +  FF   R+    S + +  R + ++   F Y +L A D +     YD  +   G DQ 
Sbjct: 95  LSCFFPYQRLTLAHSFKDKADRLEDVNAGLFTYPMLMAADILL----YDAEIVPVGKDQA 150

Query: 204 GNIICGIDLGERLK---TPKLFAL--------TSPLLTTASGTKMGKTLSG--AIWLNKE 250
            +I    D+  R       ++F L        T   +    G KM K+      I+L  +
Sbjct: 151 QHIEMTRDVASRFHAATGKEVFVLPEASHNEETM-YIPGTDGAKMSKSKGNIIDIFLTDK 209

Query: 251 MTSPYNFWQYWRNIDDAD--------VVSFAKRLTTLPMSEIDR 286
                       +    +        V +  K L      +IDR
Sbjct: 210 KLRKQIMGIKTDSTPMEEPMETEGCNVFNLYKLLA--SPEQIDR 251


>gi|328865202|gb|EGG13588.1| tyrosine-tRNA ligase [Dictyostelium fasciculatum]
          Length = 385

 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 43/228 (18%), Positives = 85/228 (37%), Gaps = 21/228 (9%)

Query: 19  HQISNPRELDILC-SQGVVTAYIGYDLTASSLHA--GHLTQLMLLFWLQKTGHKPISLMG 75
            +I +   L  L  ++  +  Y G++ +   +H   G L  + +   + K G   I  + 
Sbjct: 51  EEIVSEENLAALLTAKQKLRCYDGFEPSGR-MHIAQGILKSINV-NRMTKAGCTFIFWVA 108

Query: 76  GGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSI 135
              +++ +    D  +     Q + E  +       + +++     +     N+ WL  +
Sbjct: 109 DWFAMLNNKMGGDLVKIRKVGQYMIEIWKATGMDMEN-VEFLWSSDEINKGANDYWLRVM 167

Query: 136 KYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRL 195
                  +I   F+V R+     +  R   E  LS  +  Y  +Q  D   L  +  C+L
Sbjct: 168 -------DIARKFNVPRIKRCSQIMGR-GDEDDLSVAQILYPCMQCADIFYLKADI-CQL 218

Query: 196 QMGGSDQWGNIICGIDLGERLKTPKLFALTSP--LLTTASGT-KMGKT 240
              G DQ    +  ++  E+LK      + S   L+    G  KM K+
Sbjct: 219 ---GLDQRKVNMLALEYCEKLKIKHKPIIVSHHMLMGLKEGQEKMSKS 263


>gi|296271066|ref|YP_003653698.1| tryptophanyl-tRNA synthetase [Thermobispora bispora DSM 43833]
 gi|296093853|gb|ADG89805.1| tryptophanyl-tRNA synthetase [Thermobispora bispora DSM 43833]
          Length = 326

 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 31/236 (13%), Positives = 71/236 (30%), Gaps = 36/236 (15%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G+  +   LH G+    +     ++     +  +    ++  +       RR +    + 
Sbjct: 7   GFTPSGD-LHIGNYFGAIAPIVARQADAGTVVFITDLHALTLEHDPALVRRRTLEFATLL 65

Query: 101 ENIE-KIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
                           +    T+   L              L  +  +   +RM+     
Sbjct: 66  LAAGVDPTACLLVVQSHVPEHTELHYL--------------LECVTGYGEASRMIQ---F 108

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
           + + +R++ +      Y +L A D + L    +  +   G DQ  ++    DL +R  + 
Sbjct: 109 KEKSRRQERVRLSLLTYPVLMAADIL-LYDTDEVPV---GEDQRQHVELARDLAQRFNSR 164

Query: 220 KLFALTSPL------------LTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
                T P             L + +G KM K+      + + +  P    +    
Sbjct: 165 YAPVFTVPTAVNPPVAARIMDLASPTG-KMSKSAPSPAGVLRLLDPPDVLRRKVMR 219


>gi|295103783|emb|CBL01327.1| tryptophanyl-tRNA synthetase [Faecalibacterium prausnitzii SL3/3]
          Length = 353

 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 44/244 (18%), Positives = 72/244 (29%), Gaps = 51/244 (20%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     LQ TG +  I +M      I D     +      +   ++
Sbjct: 11  PTGR-LHVGHYVGSLKERVRLQNTGEYDEIFIM------IADAQALTD-----NADNPEK 58

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIG---------SFFSVNR 152
             + I  +   ++  G       +            +  L E+          S    N 
Sbjct: 59  VRQNILQVALDYLACGLDPNKVHIF-------IQSMVPQLTELSFYYQNLVTVSRLQRNP 111

Query: 153 MLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQW--------- 203
            +  E      +    + F  F Y I QA D           +  G  DQ          
Sbjct: 112 TVKSEIQMRNFEASIPVGF--FCYPISQAADITAFKA---TTVPAG-EDQKPMIEQCCEI 165

Query: 204 ---GNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQY 260
               N + G  L E        A    L       KM K+L   I+L++E   P +  + 
Sbjct: 166 VHKFNSVYGETLVEPQIVLPQNAACLRLPGIDGKAKMSKSLGNCIYLSEE---PEDIEKK 222

Query: 261 WRNI 264
            +++
Sbjct: 223 VKSM 226


>gi|226355634|ref|YP_002785374.1| tryptophanyl-tRNA synthetase II [Deinococcus deserti VCD115]
 gi|226317624|gb|ACO45620.1| putative tryptophan--tRNA ligase [Deinococcus deserti VCD115]
          Length = 297

 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 25/126 (19%), Positives = 38/126 (30%), Gaps = 19/126 (15%)

Query: 146 SFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGN 205
           S    N  +  E  +          F  F Y + QA D       +   L   G+DQ   
Sbjct: 65  SHLRQNPTVKMEISQKGYGEAVPAGF--FVYPVSQAADITA----FGAHLVPVGADQLPM 118

Query: 206 IICGIDLGERLKT-------PKL--FALTSPLLTTASGTKMGKTLSGAIWL----NKEMT 252
           I    ++  R  +               T+ L     G KM K+L  AI L    ++   
Sbjct: 119 IEQTREIVRRFNSLYATVLVEPQALVGETARLPGLNGGNKMSKSLGNAICLRDPADEVKR 178

Query: 253 SPYNFW 258
                +
Sbjct: 179 KVMGMF 184


>gi|197118679|ref|YP_002139106.1| tryptophanyl-tRNA synthetase [Geobacter bemidjiensis Bem]
 gi|197088039|gb|ACH39310.1| tryptophanyl-tRNA synthetase [Geobacter bemidjiensis Bem]
          Length = 327

 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 35/223 (15%), Positives = 72/223 (32%), Gaps = 33/223 (14%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   T   LH GH   ++   WL+   +            +       +  +    + + 
Sbjct: 9   GMRPTGK-LHLGHYHGVLS-NWLELQRNFECFFFAADWHSLTTEYATTDGIKDNIKEMVL 66

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           + +            +G     +++          ++ +L   +G    V+  L      
Sbjct: 67  DWLA-----------FGIDPEQSVIFEQS---RVPQHAELNLILGMITPVSW-LERNPTY 111

Query: 161 SRLKRE---QSLSFLEFN-YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL 216
             ++     + LS   F  Y +L A D + + K     +   G DQ  ++    ++  R 
Sbjct: 112 KEMQENLTTKDLSTFGFLGYPVLMASD-IIVYKASRVPV---GQDQIPHLEITREIARRF 167

Query: 217 K-------TPKLFALT-SPLLTTASGTKMGKTLSGAIWLNKEM 251
                         LT +P +    G KM K+   AI+L+ + 
Sbjct: 168 NYLYGEVFPEPAALLTETPKVLGTDGRKMSKSYGNAIFLSDDA 210


>gi|238917261|ref|YP_002930778.1| tryptophanyl-tRNA synthetase [Eubacterium eligens ATCC 27750]
 gi|238872621|gb|ACR72331.1| tryptophanyl-tRNA synthetase [Eubacterium eligens ATCC 27750]
          Length = 363

 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 44/235 (18%), Positives = 74/235 (31%), Gaps = 33/235 (14%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSIIGDPSF-RDESRRMMRSQEIQE 101
            T   LH GH    +     LQ +G      +     +I D     D +      +  Q 
Sbjct: 11  PTGR-LHLGHYVGSLKRRVELQNSGEYEKIFI-----MIADAQALTDNADNP--EKVRQN 62

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
            IE      S  I     K++  + +  + L  + +  +     S    N  +  E    
Sbjct: 63  IIEVALDYLSVGID--PAKSNIFIQSQISQLTELTFYYMNLVTVSRLQRNPTVKSEIQMR 120

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKL 221
             +    + F  F Y I QA D           + +G  DQ   I    ++  +  +   
Sbjct: 121 NFEASIPVGF--FCYPISQAADITAFKA---TTVPVG-EDQEPMIEQCREIVRKFNSVYG 174

Query: 222 FALTSP------------LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNI 264
            AL  P            L  T    KM K+L   I+L+    +P    +   ++
Sbjct: 175 EALVEPEILLPDNKACLRLPGTDGKAKMSKSLGNCIYLS---DTPEEVKKKVMSM 226


>gi|297566030|ref|YP_003685002.1| tryptophanyl-tRNA synthetase [Meiothermus silvanus DSM 9946]
 gi|296850479|gb|ADH63494.1| tryptophanyl-tRNA synthetase [Meiothermus silvanus DSM 9946]
          Length = 339

 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 40/242 (16%), Positives = 82/242 (33%), Gaps = 40/242 (16%)

Query: 41  GYDLTASSLHAGHLTQLML--LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQE 98
           G   T   +H G+    ++  +   +K G + +  +    ++    ++  E   ++  + 
Sbjct: 7   GIQPTGE-IHIGNWLGAIVNYVELGRKLGREALYCIVDYHAMTNPLAYEKE---LLAQRT 62

Query: 99  IQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
            +  +  I             ++        +W        +   I     + RM  ++ 
Sbjct: 63  FEAALVNIAAGLDPEKVTLFVQSHVPEHTELSW--------VFTNITPVGDLQRMTQYKD 114

Query: 159 VRSRLKR-EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK 217
             ++L+     L      Y +LQA D + + K     +   G DQ  ++    ++  R  
Sbjct: 115 KAAKLESVGAGL----LMYPVLQAADIL-IYKADTVPV---GEDQIQHLELSREIARRFN 166

Query: 218 TPKLFALTSPLLT-----------TASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNID 265
           T  LF  T P  T              G  KM K+    I L ++   P + W+  R + 
Sbjct: 167 T--LFGETFPEPTAYLNPDAPRVPGIDGKAKMSKSTGNTIGLLED---PQSVWEKIRLLP 221

Query: 266 DA 267
           D 
Sbjct: 222 DD 223


>gi|6321624|ref|NP_011701.1| Tys1p [Saccharomyces cerevisiae S288c]
 gi|549037|sp|P36421|SYYC_YEAST RecName: Full=Tyrosyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Tyrosyl--tRNA ligase; Short=TyrRS
 gi|149241068|pdb|2DLC|X Chain X, Crystal Structure Of The Ternary Complex Of Yeast Tyrosyl-
           Trna Synthetase
 gi|173120|gb|AAB59329.1| tyrosyl-tRNA synthetase [Saccharomyces cerevisiae]
 gi|1323328|emb|CAA97211.1| TYS1 [Saccharomyces cerevisiae]
 gi|1430951|emb|CAA67529.1| unnamed protein product [Saccharomyces cerevisiae]
 gi|285812379|tpg|DAA08279.1| TPA: Tys1p [Saccharomyces cerevisiae S288c]
          Length = 394

 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 38/234 (16%), Positives = 81/234 (34%), Gaps = 25/234 (10%)

Query: 18  IHQISNPRELDILCS--QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMG 75
           + ++ NP+ +  +    +  +  Y G   T    H G+   +  L    K G +   L+ 
Sbjct: 20  LQEVLNPQIIKDVLEVQKRHLKLYWGTAPTGRP-HCGYFVPMTKLADFLKAGCEVTVLLA 78

Query: 76  GGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK--YGTGKTDALMLNNETWLC 133
              + +      D  +  +  + +    +  +    + ++      +    ++ +   L 
Sbjct: 79  DLHAFL------DNMKAPL--EVVNYRAKYYELTIKAILRSINVPIEKLKFVVGSSYQLT 130

Query: 134 SIKYIDLLREIGSFFSVNRM--LSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
               +D+ R + +  S N       + V+   +    L      Y ++QA D   L    
Sbjct: 131 PDYTMDIFR-LSNIVSQNDAKRAGADVVK---QVANPL-LSGLIYPLMQALDEQFL---- 181

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGA 244
           D   Q GG DQ    +   +    L   K   L +P++   A G KM  +   +
Sbjct: 182 DVDCQFGGVDQRKIFVLAEENLPSLGYKKRAHLMNPMVPGLAQGGKMSASDPNS 235


>gi|312140775|ref|YP_004008111.1| tryptophan-tRNA synthetase trps [Rhodococcus equi 103S]
 gi|325675585|ref|ZP_08155269.1| tryptophan--tRNA ligase [Rhodococcus equi ATCC 33707]
 gi|311890114|emb|CBH49432.1| tryptophan-tRNA synthetase TrpS [Rhodococcus equi 103S]
 gi|325553556|gb|EGD23234.1| tryptophan--tRNA ligase [Rhodococcus equi ATCC 33707]
          Length = 347

 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 55/295 (18%), Positives = 92/295 (31%), Gaps = 43/295 (14%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   TA S H G+    +  +   +        +    + I  P    E R+       Q
Sbjct: 21  GIQPTADSFHLGNFLGALQQWVPLQDDFDAFYFIPDLHA-ITVPQDPKELRQRTLRAVAQ 79

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
                I    S+          A +     W        +L  I  F   +RM  F+   
Sbjct: 80  LLALGIDPERSTLFVQSQVPEHAELA----W--------VLNCITGFGEASRMTQFKDKS 127

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT-- 218
           +R +     S   F Y +L A D + L +     +   G DQ  ++    DL  R  T  
Sbjct: 128 AR-QGSDHASVGLFTYPVLMAADIL-LYRPQRVPV---GEDQRQHLELARDLAGRFNTRF 182

Query: 219 --------PKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRN-IDDAD 268
                   P++   T+ +      T KM K+      L   +  P    +  ++ + D +
Sbjct: 183 GKTFVIPEPQIIKGTAKIYDLQDPTSKMSKSGPTPAGLVNLLDDPKVSAKKIKSAVTDNE 242

Query: 269 ------------VVSFAKRLTTLPMSEIDR-MAKLQGKEINEAKKIIATEITTMV 310
                       V +     + L    ID  +A  +GK   + K   A  +   V
Sbjct: 243 REIRFDPQNKPGVSNLLTIQSALSGKSIDDLVAGYEGKGYGDLKADTAEVLGEFV 297


>gi|333029320|ref|ZP_08457381.1| pseudouridine synthase Rsu [Bacteroides coprosuis DSM 18011]
 gi|332739917|gb|EGJ70399.1| pseudouridine synthase Rsu [Bacteroides coprosuis DSM 18011]
          Length = 437

 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 14/71 (19%), Positives = 31/71 (43%), Gaps = 1/71 (1%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           + +  + L   +  AG   S  EA   +++ A+ +N  I+     ++K  D        +
Sbjct: 197 DPNEPIRLNKYLANAGVC-SRREADEFIETGAVTVNGEIVKELGTKVKRSDEVKFNGELV 255

Query: 405 SFGKKNHIICH 415
           S  KK +++ +
Sbjct: 256 SIEKKVYVLLN 266


>gi|221635772|ref|YP_002523648.1| tryptophanyl-tRNA synthetase [Thermomicrobium roseum DSM 5159]
 gi|221158148|gb|ACM07266.1| tryptophanyl-tRNA synthetase [Thermomicrobium roseum DSM 5159]
          Length = 334

 Score = 47.1 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 54/307 (17%), Positives = 98/307 (31%), Gaps = 62/307 (20%)

Query: 34  GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRM 93
           G   A+ G   T   +H G+    +  + LQ+  +  I  +    ++   P    E R+ 
Sbjct: 3   GKPRAFSGIQPTGG-IHLGNYLGAIRNWVLQQDQYDNIFSIVDLHAMT-IPYDPRELRQR 60

Query: 94  MRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRM 153
                       I    S        +    +     W        +L  + +F  + RM
Sbjct: 61  TLEVGSVLLAAGIDPERSILFVQSDVREHTELC----W--------ILGTLATFGELRRM 108

Query: 154 LSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLG 213
                 + + K  + +    F Y +LQA D +     YD  +   G DQ  +I    DL 
Sbjct: 109 TQ---FKEKSKGNERVGAGLFFYPVLQAADILL----YDAAVVPVGEDQKQHIELTRDLA 161

Query: 214 ERLK-----------------TPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYN 256
            R                     ++ +LT PL       KM K+        +    P  
Sbjct: 162 IRFNNTFGETFVVPEPDIKPAGARIMSLTDPL------KKMSKSDPDPDSRIELRDPPEV 215

Query: 257 FWQYWRN-IDDAD-VVSF--------------AKRLTTLPMSEIDRMAKLQGKEINEAKK 300
             +  R  + D++ V+ +                 L+ +P+ E++      GK   + K+
Sbjct: 216 IRRKIRKAVTDSETVIRYDEERKPAISNLLTIYSLLSGIPIPELEERYA--GKGYGQFKQ 273

Query: 301 IIATEIT 307
            +A  I 
Sbjct: 274 DLAEVII 280


>gi|151943462|gb|EDN61773.1| tyrosyl-tRNA synthetase [Saccharomyces cerevisiae YJM789]
 gi|190406803|gb|EDV10070.1| tyrosyl-tRNA synthetase [Saccharomyces cerevisiae RM11-1a]
 gi|256269801|gb|EEU05066.1| Tys1p [Saccharomyces cerevisiae JAY291]
 gi|259146687|emb|CAY79944.1| Tys1p [Saccharomyces cerevisiae EC1118]
 gi|323308945|gb|EGA62176.1| Tys1p [Saccharomyces cerevisiae FostersO]
 gi|323337482|gb|EGA78730.1| Tys1p [Saccharomyces cerevisiae Vin13]
 gi|323348452|gb|EGA82697.1| Tys1p [Saccharomyces cerevisiae Lalvin QA23]
 gi|323354857|gb|EGA86690.1| Tys1p [Saccharomyces cerevisiae VL3]
          Length = 394

 Score = 47.1 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 38/234 (16%), Positives = 81/234 (34%), Gaps = 25/234 (10%)

Query: 18  IHQISNPRELDILCS--QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMG 75
           + ++ NP+ +  +    +  +  Y G   T    H G+   +  L    K G +   L+ 
Sbjct: 20  LQEVLNPQIIKDVLEVQKRHLKLYWGTAPTGRP-HCGYFVPMTKLADFLKAGCEVTVLLA 78

Query: 76  GGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK--YGTGKTDALMLNNETWLC 133
              + +      D  +  +  + +    +  +    + ++      +    ++ +   L 
Sbjct: 79  DLHAFL------DNMKAPL--EVVNYRAKYYELTIKAILRSINVPIEKLKFVVGSSYQLT 130

Query: 134 SIKYIDLLREIGSFFSVNRM--LSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
               +D+ R + +  S N       + V+   +    L      Y ++QA D   L    
Sbjct: 131 PDYTMDIFR-LSNIVSQNDAKRAGADVVK---QVANPL-LSGLIYPLMQALDEQFL---- 181

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGA 244
           D   Q GG DQ    +   +    L   K   L +P++   A G KM  +   +
Sbjct: 182 DVDCQFGGVDQRKIFVLAEENLPSLGYKKRAHLMNPMVPGLAQGGKMSASDPNS 235


>gi|15837030|ref|NP_297718.1| tryptophanyl-tRNA synthetase [Xylella fastidiosa 9a5c]
 gi|25009451|sp|Q9PG74|SYW_XYLFA RecName: Full=Tryptophanyl-tRNA synthetase; AltName:
           Full=Tryptophan--tRNA ligase; Short=TrpRS
 gi|9105270|gb|AAF83238.1|AE003894_3 tryptophanyl-tRNA synthetase [Xylella fastidiosa 9a5c]
          Length = 434

 Score = 47.1 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 33/215 (15%), Positives = 64/215 (29%), Gaps = 34/215 (15%)

Query: 50  HAGHLT-QLMLLFWLQKT-GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIK 107
           H G+    +          G +    +    S+I         R  +  +     +    
Sbjct: 20  HLGNYVGAIRPAIRAAGAPGTESFYFLADLHSLIKVQDPERTQRSTL--EIAATWLAC-- 75

Query: 108 GIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV--RSRLKR 165
                    G       +          + + LL  +     +NR  ++++V  ++R + 
Sbjct: 76  ---------GLDPEKVWLYRQSDVPEITELMWLLTCVAGKGILNRAHAYKAVVDKNRSEG 126

Query: 166 EQ---SLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK---TP 219
                 ++   F Y +L A D + L   +   +   G DQ  +I    D  +R       
Sbjct: 127 GDDDAGITAGLFMYPVLMAADIL-LFNAHQVPV---GRDQIQHIEMARDFAQRFNHIYGG 182

Query: 220 KLFAL-------TSPLLTTASGTKMGKTLSGAIWL 247
           + F L           L    G KM K+    + L
Sbjct: 183 EYFVLPEAAIDEQVATLPGLDGRKMSKSYGNTMPL 217


>gi|254509889|ref|ZP_05121956.1| ribosomal large subunit pseudouridine synthase [Rhodobacteraceae
           bacterium KLH11]
 gi|221533600|gb|EEE36588.1| ribosomal large subunit pseudouridine synthase [Rhodobacteraceae
           bacterium KLH11]
          Length = 298

 Score = 47.1 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 12/49 (24%), Positives = 25/49 (51%), Gaps = 1/49 (2%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
             G  +  ++ +AG A S  EA R +++  + +N   I++  L +  +D
Sbjct: 33  PPGDRIAKVLARAGIA-SRREAERMIEAGRVAVNGKPINSPALNVTGKD 80


>gi|108862788|gb|ABA99448.2| Tryptophanyl-tRNA synthetase, putative, expressed [Oryza sativa
           Japonica Group]
          Length = 341

 Score = 47.1 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 20/101 (19%), Positives = 37/101 (36%), Gaps = 1/101 (0%)

Query: 15  RGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +  E+  L  +G     Y G   ++ +LH GHL   M   +LQ     P+ +
Sbjct: 73  RGLFFAHRDLNEILDLYEKGEKFYLYTGRGPSSEALHLGHLIPFMFTKYLQDAFKVPLVI 132

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFI 114
                      +   E  + +  +  ++ I     +  +FI
Sbjct: 133 QLTDDEKFLWKNLTVEETKRLARENAKDIIACGFDVERTFI 173


>gi|257079543|ref|ZP_05573904.1| tryptophanyl-tRNA synthetase [Enterococcus faecalis JH1]
 gi|294781471|ref|ZP_06746811.1| tryptophan--tRNA ligase [Enterococcus faecalis PC1.1]
 gi|307270907|ref|ZP_07552194.1| tryptophan--tRNA ligase [Enterococcus faecalis TX4248]
 gi|256987573|gb|EEU74875.1| tryptophanyl-tRNA synthetase [Enterococcus faecalis JH1]
 gi|294451459|gb|EFG19921.1| tryptophan--tRNA ligase [Enterococcus faecalis PC1.1]
 gi|306512820|gb|EFM81465.1| tryptophan--tRNA ligase [Enterococcus faecalis TX4248]
 gi|329569997|gb|EGG51752.1| tryptophan--tRNA ligase [Enterococcus faecalis TX1467]
          Length = 334

 Score = 47.1 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 53/342 (15%), Positives = 100/342 (29%), Gaps = 55/342 (16%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
            T   LH GH    +      +        +     +I D      +      +++  N+
Sbjct: 10  PTGK-LHLGHYVGSLKKRVEMQADPTNQLFV-----MIADLQ--ALTDNAKNPEKVSANV 61

Query: 104 EKIKGIFSSFIKY-----GTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
                     + Y        KT   + +    L  +    L     S    N  +  E 
Sbjct: 62  ------LEVALDYLAVGLDPTKTTIFIQSQIPQLAELTMYYLNLVTTSRVRRNPTVKAEI 115

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
            + +        F  F Y + QA D       +   L   G DQ   +    ++      
Sbjct: 116 EQKKFGEGVPTGF--FIYPVSQAADITA----FQANLVPVGEDQKPMLEQAQEIVHSFNQ 169

Query: 219 PKLFALTSP----------LLTTASGT-KMGKTLSGAIWLNKEMT--SPYNFWQYW---- 261
                L  P           L    G  KM K+L   I+L+             Y     
Sbjct: 170 TYGEVLVRPEAVLPPKGMGRLPGIDGNGKMSKSLGNGIYLSDPAEVVQKKVMSMYTDPNH 229

Query: 262 RNIDD------ADVVSFAKRLTT--LPMSEIDRMAKLQGKEINEAKK----IIATEITTM 309
             I+D        V ++          + E+    +  G    + K+    ++  E+  +
Sbjct: 230 IRIEDPGQVEGNMVFTYLDVFGENKEYIEELKEHYRHGGLGDVKIKRYLIDVLEEELAPI 289

Query: 310 VHGREEAEKAATAAME-CFDMSIHSQHMPTISISKDEVSRGM 350
              REE  K   A ME     S+ ++ +   ++++ + + G+
Sbjct: 290 RRRREELAKNPEAIMEMLHKGSLAAEKVAAQTLTEVKKAMGI 331


>gi|207345011|gb|EDZ71969.1| YGR185Cp-like protein [Saccharomyces cerevisiae AWRI1631]
          Length = 394

 Score = 47.1 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 35/232 (15%), Positives = 77/232 (33%), Gaps = 21/232 (9%)

Query: 18  IHQISNPRELDILCS--QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMG 75
           + ++ NP+ +  +    +  +  Y G   T    H G+   +  L    K G +   L+ 
Sbjct: 20  LQEVLNPQIIKDVLEVQKRHLKLYWGTAPTGRP-HCGYFVPMTKLADFLKAGCEVTVLLA 78

Query: 76  GGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK--YGTGKTDALMLNNETWLC 133
              + +      D  +  +  + +    +  +    + ++      +    ++ +   L 
Sbjct: 79  DLHAFL------DNMKAPL--EVVNYRAKYYELTIKAILRSINVPIEKLKFVVGSSYQLT 130

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDC 193
               +D+ R        +   +   V  ++            Y ++QA D   L    D 
Sbjct: 131 PDYTMDIFRLSNIVSQNDAKRAGADVVKQVANPL---LSGLIYPLMQALDEQFL----DV 183

Query: 194 RLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTT-ASGTKMGKTLSGA 244
             Q GG DQ    +   +    L   K   L +P++   A G KM  +   +
Sbjct: 184 DCQFGGVDQRKIFVLAEENLPSLGYKKRAHLMNPMVPGLAQGGKMSASDPNS 235


>gi|154340804|ref|XP_001566355.1| tryptophanyl-tRNA synthetase [Leishmania braziliensis
           MHOM/BR/75/M2904]
 gi|134063678|emb|CAM39863.1| putative tryptophanyl-tRNA synthetase [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 473

 Score = 47.1 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 24/125 (19%), Positives = 41/125 (32%), Gaps = 12/125 (9%)

Query: 15  RGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +    LD          Y G   ++ S+H GHL   M   WLQ T   P+ +
Sbjct: 134 RGIFFSHRDLNLILDAYEKGEPFYLYTGRGPSSESMHIGHLIPFMFTKWLQDTFQVPLVI 193

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                 +  D  F  +    +  +EI +            I +G       +  +  ++ 
Sbjct: 194 -----QLTDDEKFFFKD---VTLEEIDKMT---TENLKDIIAFGFDPNLTFIFRDFEYVG 242

Query: 134 SIKYI 138
            +  I
Sbjct: 243 KMYRI 247


>gi|145231737|ref|XP_001399342.1| tyrosyl-tRNA synthetase, cytoplasmic [Aspergillus niger CBS 513.88]
 gi|134056246|emb|CAK37503.1| unnamed protein product [Aspergillus niger]
          Length = 382

 Score = 47.1 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 40/230 (17%), Positives = 79/230 (34%), Gaps = 25/230 (10%)

Query: 18  IHQISNPRELDILCSQGVV-TAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGG 76
           + ++ N   ++ + ++G     Y G   T    H G+L   + +      G +   L+  
Sbjct: 17  LQEVLNKDIIETILAEGRSPKIYWGTSPTGKP-HCGYLVPAVKIAQFLAAGAEMTILIAD 75

Query: 77  GTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIK 136
             + +   S +         + ++   +  +   ++ ++     T+ L     +     K
Sbjct: 76  LHANL--DSLKS------TFEIVEHRAKYYEYTITALLQAVGVSTEKLRFVRGS--SYQK 125

Query: 137 YIDLLREIGSFFSV-----NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
             D + ++    SV      +    E V+        LS L   Y +LQ  D   L    
Sbjct: 126 NADYVMDVYRLSSVVSEHDAKRAGAEIVKQ--SNNGPLSGL--LYPLLQVLDEQYL---- 177

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
           D   Q GG DQ        +   +L   K   L + ++   SG KM  + 
Sbjct: 178 DVDAQFGGLDQRKLFAASTEWHPKLGYKKRAHLCNAMVPGLSGGKMSSSE 227


>gi|322717436|gb|EFZ09007.1| tryptophanyl-tRNA synthetase II [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. A50]
          Length = 337

 Score = 47.1 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 35/217 (16%), Positives = 63/217 (29%), Gaps = 29/217 (13%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMR-SQEIQEN 102
            T  SLH GH    +      +  H+   L+     +       D      +    I + 
Sbjct: 13  PTG-SLHLGHYVGSLRQRVALQQDHQQYVLIADLQGL------TDNGSNPQKIRDNIPQV 65

Query: 103 IEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR 162
           +     +           T   + +    L  +  + +     +    N  +  E  +  
Sbjct: 66  LADYLAVG-----IDPALTTICLQSALPALAELTVLYMNIVTVARVEHNPTVKNEIAQKG 120

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT---- 218
             R   + F    Y I QA D       +   +   G DQ   I    ++  ++ +    
Sbjct: 121 FTRSLPVGF--MAYPISQAADITA----FKAEMVPVGDDQLPMIEQTNEIVHKMNSLFSS 174

Query: 219 ---PKLFALTSPL--LTTASG-TKMGKTLSGAIWLNK 249
                  AL S    L    G  KM K+L   + L+ 
Sbjct: 175 PVLRPCQALLSDTGRLPGIDGSAKMSKSLGNTLLLSA 211


>gi|262369434|ref|ZP_06062762.1| tryptophanyl-tRNA synthetase [Acinetobacter johnsonii SH046]
 gi|262315502|gb|EEY96541.1| tryptophanyl-tRNA synthetase [Acinetobacter johnsonii SH046]
          Length = 337

 Score = 47.1 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 41/218 (18%), Positives = 68/218 (31%), Gaps = 31/218 (14%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
            T   LH GH    +      +  H    L+    +   +    ++ RR      I E  
Sbjct: 16  PTGQ-LHLGHFVGSLRSRVGLQDSHHQHLLLADAQAFTDNADNFEKVRR-----NILEVA 69

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR- 162
                +          KT   + ++   L  +  +  L  +              ++ R 
Sbjct: 70  TDYLAVG-----IDPTKTTICVQSSLPALNELTML-YLNFVTVSRLERNPTIKSEIQMRG 123

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQ-----WGNIICGIDLGERLK 217
            +R+    FL   Y + QA D       +   +   G DQ       N I    L  ++ 
Sbjct: 124 FERDIPAGFL--CYPVAQAADITA----FKATVVPVGEDQIPMIEQTNEIVRR-LNRQIG 176

Query: 218 T---PKLFALTSPL--LTTASGT-KMGKTLSGAIWLNK 249
               P+  AL S +  L    G  KM K+L   I L+ 
Sbjct: 177 QELLPECKALLSNMSRLPGFDGKAKMSKSLGNTIVLDA 214


>gi|170582075|ref|XP_001895965.1| tryptophanyl-tRNA synthetase [Brugia malayi]
 gi|158596909|gb|EDP35170.1| tryptophanyl-tRNA synthetase, putative [Brugia malayi]
          Length = 408

 Score = 47.1 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 23/106 (21%), Positives = 38/106 (35%), Gaps = 1/106 (0%)

Query: 15  RGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +    LD L  +     Y G   ++ SLH GHL   +   WLQ     P+ +
Sbjct: 74  RGLFFAHRDLSLILDRLEQKKPFFLYTGRGPSSGSLHLGHLIPFVFTKWLQDVFDVPLII 133

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTG 119
                      +   +  + M ++ I++ I        +FI   T 
Sbjct: 134 QVTDDEKFLWKNHTLDEIKRMANENIKDIIACGFSPDKTFIFLDTE 179


>gi|299472643|emb|CBN78295.1| Tryptophan--tRNA ligase [Ectocarpus siliculosus]
          Length = 609

 Score = 47.1 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 52/351 (14%), Positives = 101/351 (28%), Gaps = 78/351 (22%)

Query: 15  RGFIHQISNPRELDILCSQGVVTA-YIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +  ++  L   G     Y G   ++ +LH GHL       +LQ+    P+ +
Sbjct: 264 RGLFFSHRDLTQILDLYEAGKKFFLYTGRGPSSDALHLGHLVPFHFTKYLQEAFKVPLVV 323

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQ-EIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL 132
                         D+ + + + + +++E            I  G       + ++  ++
Sbjct: 324 -----------QLTDDEKFLFKPELKLEECHRLAFENAKDIIACGFDPESTFIFSDLDYI 372

Query: 133 CSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ-AYDFVELA--- 188
             +    ++ +I    + N++              ++    F    +Q A  F       
Sbjct: 373 QHMYP--VVLKIQKLVTYNQV--RGIFG--FTESHNIGCQAF--PAVQAAPSFSSSFPIP 424

Query: 189 ----KNYDCRLQMGGSDQWGNIICGIDLG-ERLKTPKL--FALTSPLLTTASGTKMGKT- 240
                +  C +     DQ        D+             +   P L    G KM  + 
Sbjct: 425 LGGTPDRPCLIPC-AIDQDAYFRMTRDVAPRMKLRKPALIHSRFFPGLQGPGG-KMSSST 482

Query: 241 LSGAIWLNKEM------------------------------TSPYNFWQYWRNIDDADVV 270
            S AI++                                    PY +  ++   DD ++ 
Sbjct: 483 ESSAIFVTDTPKKVKKKINGCFSGGQETKELQELHGANIHVDVPYQYLTFFME-DDDELK 541

Query: 271 SFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAAT 321
                       E      L G    E KKI+   +T M    ++A  A T
Sbjct: 542 RIG--------EEYAAGRMLTG----EVKKILIEILTKMTKDHQDARAAVT 580


>gi|125579618|gb|EAZ20764.1| hypothetical protein OsJ_36387 [Oryza sativa Japonica Group]
          Length = 408

 Score = 47.1 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 59/337 (17%), Positives = 105/337 (31%), Gaps = 57/337 (16%)

Query: 15  RGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +  E+  L  +G     Y G   ++ +LH GHL   M   +LQ     P+ +
Sbjct: 73  RGLFFGHRDLNEILDLYEKGEKFYLYTGRGPSSEALHLGHLIPFMFTKYLQDAFKVPLVI 132

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                      +   E  + +  +  ++ I     +  +FI             N     
Sbjct: 133 QLTDDEKFLWKNLTVEETKRLARENAKDIIACGFDVERTFIFSDFNYVGGAFYEN----- 187

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY-----DFVELA 188
                  + ++    + N+++           E  +  + F    +QA       F  L 
Sbjct: 188 -------MVKVARCVTYNKVVG--IFG--FTPEDHIGKVSF--PPVQAVPSFPSSFPHLF 234

Query: 189 KNYD---CRLQMGGSDQWGNIICGIDLGERLKTPKLFAL---TSPLLTTASGTKMGKTLS 242
              D   C +     DQ        D+  R+   K   +     P L   + TKM  +  
Sbjct: 235 SGNDQLRCLIPC-AIDQDPYFRMTRDVAPRIGYQKPSLIESRFFPALQGEN-TKMSASDP 292

Query: 243 G-AIWLN------KEMTSPYNFWQYWRNID---------DADV-VSFAKRLTTLPMSEID 285
             AI++       K   + Y F     +I+         D DV + +      L      
Sbjct: 293 NSAIYVTDSAKEIKTKVNKYAFSGGRDSIELHRKLGANLDVDVPIKYLNF--FLEDDNEL 350

Query: 286 RMAKLQGKEIN----EAKKIIATEITTMV--HGREEA 316
              K + KE      E K+ +   ++ +V  H R  A
Sbjct: 351 EHIKKEYKEGRMLTGEVKQRLVAVLSELVARHQRARA 387


>gi|108862789|gb|ABA99449.2| Tryptophanyl-tRNA synthetase, putative, expressed [Oryza sativa
           Japonica Group]
          Length = 333

 Score = 47.1 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 20/101 (19%), Positives = 37/101 (36%), Gaps = 1/101 (0%)

Query: 15  RGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +  E+  L  +G     Y G   ++ +LH GHL   M   +LQ     P+ +
Sbjct: 73  RGLFFAHRDLNEILDLYEKGEKFYLYTGRGPSSEALHLGHLIPFMFTKYLQDAFKVPLVI 132

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFI 114
                      +   E  + +  +  ++ I     +  +FI
Sbjct: 133 QLTDDEKFLWKNLTVEETKRLARENAKDIIACGFDVERTFI 173


>gi|67468336|ref|XP_650212.1| tyrosyl-tRNA synthetase [Entamoeba histolytica HM-1:IMSS]
 gi|56466798|gb|EAL44826.1| tyrosyl-tRNA synthetase, putative [Entamoeba histolytica HM-1:IMSS]
          Length = 369

 Score = 47.1 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 45/266 (16%), Positives = 88/266 (33%), Gaps = 56/266 (21%)

Query: 10  SILSER-----GFIHQISNPRELDILCSQGV-VTAYIGYDLTASSLHA------------ 51
             +  R     G + +     +L  L  +     AY G++ +   +H             
Sbjct: 12  EEIEARITKLLGIVEECDTINDLRALFKEKSNFVAYNGFEPSGR-IHIAQAILTVLNANK 70

Query: 52  ----GHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIK 107
               G L ++ +  W  +  HK    MGG  S I           ++    I+       
Sbjct: 71  IHECGGLYKIYIADWFAQLNHK----MGGDLSKIQ----------VLGKYFIEVFKACGI 116

Query: 108 GIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ 167
              ++   + +      ++ N        Y  L+ +I +  +VNR+     +  R   + 
Sbjct: 117 QEGAAEFIWASD-----LIQNSK-----TYWPLVLDIATKNTVNRITRCSQIMGR-DEKD 165

Query: 168 SLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSP 227
           +LS  +  Y  +Q  D  EL       +   G DQ    +   +    +       L+  
Sbjct: 166 ALSTSQLFYPCMQCADIFEL----GADVCQLGLDQRKVNMLAREYAPTVNRKAPIILSHH 221

Query: 228 LLTTASGT---KMGKTLSG-AIWLNK 249
           +L    G    KM K++   AI+++ 
Sbjct: 222 MLMGLKGPKAGKMSKSIPDSAIFMDD 247


>gi|293402019|ref|ZP_06646158.1| tryptophan--tRNA ligase [Erysipelotrichaceae bacterium 5_2_54FAA]
 gi|291304411|gb|EFE45661.1| tryptophan--tRNA ligase [Erysipelotrichaceae bacterium 5_2_54FAA]
          Length = 328

 Score = 47.1 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 46/296 (15%), Positives = 93/296 (31%), Gaps = 47/296 (15%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   T   L  G+    +  F   +  ++    +    + I     + E  +      I 
Sbjct: 7   GIKPTGR-LTLGNYIGAIRNFVAYQDDYEMFVFIANMHA-ITVAQDKAEL-KKNTRDVIA 63

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFS-VNRMLSFESV 159
             +                KT   + ++      + +   +    S+   + RM  ++  
Sbjct: 64  LYLACG---------LDPEKTTIFLQSDVHEHAELGW---IMTCNSYMGELQRMTQYKD- 110

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT- 218
               K E  ++   F Y  L A D +    +Y   + +G  DQ  ++    +L ER    
Sbjct: 111 -KTAKGETGITAGLFTYPSLMAADILLYDADY---VPVG-VDQKQHVELTRNLAERFNNR 165

Query: 219 -PKLFALTSPLLTTASGT---------KMGKTLSGAIWLNKEMTSPYNFWQYWRN-IDDA 267
               F +  PL+               KM K+          +  P    +   + + D+
Sbjct: 166 YGDTFTIPEPLVAKVGAKIYSLQDPTKKMSKSEDNPKGTIDLLDEPAVARKKIMSAVTDS 225

Query: 268 D------------VVSFAKRLTTLPMSEIDRM-AKLQGKEINEAKKIIATEITTMV 310
                        + +    L++L   EID + A+ +GK   E KK +   +   +
Sbjct: 226 LGIIQYEPEKQPGIANLLTILSSLNGEEIDHIVARYEGKGYGELKKEVGQAVFDFL 281


>gi|294952951|ref|XP_002787529.1| IFP53, putative [Perkinsus marinus ATCC 50983]
 gi|239902535|gb|EER19325.1| IFP53, putative [Perkinsus marinus ATCC 50983]
          Length = 600

 Score = 47.1 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 53/334 (15%), Positives = 98/334 (29%), Gaps = 49/334 (14%)

Query: 15  RGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +   L     +G     Y G   ++ SLH GHL       WLQ T   P+ +
Sbjct: 252 RGLFFSHRDLGILLDKYERGIPFYLYTGRGPSSESLHLGHLVPFQFTKWLQDTFDVPLVI 311

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                 +  D  F  +    +  +E               I  G       + ++  ++ 
Sbjct: 312 -----QLTDDEKFFFKD--YLSLEEAHRLA---YENAKDIIACGFDMDKTFIFSDLDYMG 361

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA----- 188
           ++     + +I    + N+  +  +         S++   F   I  +  F         
Sbjct: 362 TMYPN--VCKIQKLVTYNQ--ARGAFG--FTGSDSVAKSSFC-AIQASPSFSTTFPSIFG 414

Query: 189 --KNYDCRLQMGGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTASGTKMGKTLSG 243
             K+  C +     DQ        D+  R+   K   + +   P L     TKM  ++  
Sbjct: 415 DRKDIMCLIPQ-AIDQDPYFRVTRDVAPRMGMLKPALIHSKFFPALQGHK-TKMSGSVGN 472

Query: 244 -AIWLN------KEMTSPYNFWQ----------YWRNIDDADVVSFAKRL--TTLPMSEI 284
             I +       K     Y F            Y  N++      + + +        +I
Sbjct: 473 TTIMVTDSPKEIKSKIMKYCFSGGQDSAEEQRKYGANLEVDVAYEYLRYIMEDDEKFEQI 532

Query: 285 DRMAKLQGKEINEAKKIIATEITTMVHGREEAEK 318
                       E K I+  E+  +    +EA  
Sbjct: 533 GEEYSSGKLLTGEVKNILVEELVKLTKAHQEARA 566


>gi|226509036|ref|NP_001148699.1| tyrosyl-tRNA synthetase [Zea mays]
 gi|195621482|gb|ACG32571.1| tyrosyl-tRNA synthetase [Zea mays]
          Length = 380

 Score = 47.1 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 40/234 (17%), Positives = 82/234 (35%), Gaps = 25/234 (10%)

Query: 15  RGFIHQISNPRELDILCSQGVVTA-YIGYDLTASSLHA--GHLTQLMLLFWLQKTGHKPI 71
           RG   +     EL  L     V   Y G++ +   +H   G + + + +  +   G K  
Sbjct: 42  RGIGEECIQEDELRRLLENKPVPICYDGFEPSGR-MHIAQG-VVKTINVNKMVSAGCKVK 99

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
             +    + + +    D        ++IQ     +  I+ +    G        L +   
Sbjct: 100 IWIADWFAQLNNKMGGD-------LKKIQTVGRYMIEIWKAA---GMNLDGVEFLWSSEE 149

Query: 132 LCSIKYI--DLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
           +    +    ++ +I    +V R++    +  R   +  L+  +  Y  +Q  D   L  
Sbjct: 150 INKRAHEYWPIVMDIARKNNVKRIMRCCQIMGR-SDQDDLTAAQIFYPCMQCADIFFLKA 208

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLLTT-ASGT-KMGKT 240
           +  C+L   G DQ    +   +  + +K   K   L+  +L     G  KM K+
Sbjct: 209 DI-CQL---GMDQRKVNVLAREYCDDIKRKNKPIILSHHMLPGFKEGQEKMSKS 258


>gi|282880890|ref|ZP_06289583.1| tryptophan--tRNA ligase [Prevotella timonensis CRIS 5C-B1]
 gi|281305272|gb|EFA97339.1| tryptophan--tRNA ligase [Prevotella timonensis CRIS 5C-B1]
          Length = 329

 Score = 47.1 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 44/304 (14%), Positives = 88/304 (28%), Gaps = 63/304 (20%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGG---TSIIGDPSFRDESRRMMRSQ 97
           G   T   LH G+    +  F   +  +  +  +      T+       +  +R ++   
Sbjct: 8   GIRPTG-FLHLGNYFGAVKSFIEMQNSYDCMFFIADWHSLTTRPKPEDIQKSARVILA-- 64

Query: 98  EIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFE 157
             +     I    +        K    +         +     + E+G   +        
Sbjct: 65  --EYLACGIDPDKAPIYIQSDVKETLEL------YLYLNMNTYIGELGRVTTFKE----- 111

Query: 158 SVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGID----LG 213
             ++R K+  +++   F Y  L A D ++  +     +   G DQ  N+           
Sbjct: 112 --KAR-KQPDNVNAGLFTYPTLMAADILQ-HRAKKVPV---GKDQEQNMEMARKCAARFN 164

Query: 214 ERLKTP----------KLFALTSPLLTTASGTKMGKTLSGAIWL-NKEMTSPYNFWQYWR 262
                              AL  P L  +   KMGK+    I+L + + T      +   
Sbjct: 165 RIYGVEFFPEPENFYFNAQALKVPGLDGSG--KMGKSEGNCIYLHDDDKT----ITKKVM 218

Query: 263 N-IDD--------ADVVSFAKRLTTLPMSEIDRMAKLQGKEINEA-------KKIIATEI 306
             + D                  T L ++          ++ N+        KK IAT++
Sbjct: 219 KAVTDNGPQSANSEKPEVIENLFTFLKIASTQDTYDYFNEKWNDCSIRYGDLKKQIATDL 278

Query: 307 TTMV 310
             +V
Sbjct: 279 CAVV 282


>gi|157169525|ref|XP_001657882.1| tyrosyl-tRNA synthetase [Aedes aegypti]
 gi|108883662|gb|EAT47887.1| tyrosyl-tRNA synthetase [Aedes aegypti]
          Length = 524

 Score = 47.1 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 40/245 (16%), Positives = 71/245 (28%), Gaps = 23/245 (9%)

Query: 1   MPAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL 60
           M A   +    L  R    ++     +  +  +  +  Y G   T    H  +   +  +
Sbjct: 1   MTALTWEEKEQLITRNL-QEVLGQDNMRTILKERDLKVYWGTATTGKP-HIAYFVPMSKI 58

Query: 61  FWLQKTGHKPISLMGGGTSII---GDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG 117
               K G +   L     + +     P    + R       I+  +  +       +K+ 
Sbjct: 59  ADFLKAGCEVTILFADLHAYLDNMKAPWSLLQERTKYYEAVIKAMLSSLGVPLDK-LKFV 117

Query: 118 TGKTDALMLNNETWLCSIKYIDLLREIGSFFSV-NRMLSFESVRSRLKREQSLSFLEFNY 176
            G            L     +D+ +          +    E V+   + E  L      Y
Sbjct: 118 CGTDYQ--------LSKEYTLDVYKLSSVVTQHDAKKAGAEVVK---QVEHPL-LSGILY 165

Query: 177 MILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTK 236
             LQA D   L        Q GG DQ            +L   K   L +P++   +G K
Sbjct: 166 PGLQALDEEYLK----VDAQFGGVDQRKIFTFAEKYMPQLGYAKRIHLMNPMIPGLAGGK 221

Query: 237 MGKTL 241
           M  + 
Sbjct: 222 MSSSE 226


>gi|157136346|ref|XP_001663714.1| tryptophanyl-tRNA synthetase [Aedes aegypti]
 gi|108869987|gb|EAT34212.1| tryptophanyl-tRNA synthetase [Aedes aegypti]
          Length = 417

 Score = 47.1 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 21/124 (16%), Positives = 44/124 (35%), Gaps = 12/124 (9%)

Query: 12  LSERGFIHQISNPRELDILCSQGVV-TAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           L  RG      +   L  +   G     Y G   ++ S+H GHL   ++  WLQ+T   P
Sbjct: 72  LIRRGIFFSHRDLHTLLNMVEAGKKFYLYTGRGPSSESMHLGHLVPFIVTKWLQETFDVP 131

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           + +              D+ + + +   +++++   +      I  G       +  N  
Sbjct: 132 LVI-----------QLTDDEKTLWKDLTVEQSMRMARENAKDIIAIGFDVNKTFIFANLD 180

Query: 131 WLCS 134
           ++  
Sbjct: 181 YMGR 184


>gi|254304303|ref|ZP_04971661.1| tryptophan--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum
           ATCC 10953]
 gi|148324495|gb|EDK89745.1| tryptophan--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum
           ATCC 10953]
          Length = 325

 Score = 47.1 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 35/282 (12%), Positives = 79/282 (28%), Gaps = 41/282 (14%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   +   LH G+    M  F   +  +     +    S+             +   E  
Sbjct: 7   GIQPSGI-LHIGNYFGAMKQFVDLQDSYDGFYFIADYHSLTS-----------LTKAETL 54

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
                   +    +     K+   + +N      + ++     + +   V  +    S +
Sbjct: 55  RQDTYNIVLDYLAVGLDPNKSTIYLQSNVPEHTEMTWL-----LSNITPVGLLERGHSYK 109

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT-- 218
            ++ +    +     Y +L A D +     YD  +   G DQ  ++    D+  +     
Sbjct: 110 DKIAKGIPANTGLLTYPVLMAADILI----YDTDVVPVGKDQKQHLEMTRDIAMKFNQQY 165

Query: 219 -------PKLFALTSP-LLTTASGTKMGKTLSGAI--WLNKEMTSPYNFWQYWRNI---- 264
                  P+ F L    ++    G KM K+ +  I  ++ K+            +     
Sbjct: 166 EVDFFKLPEPFILDDSAIVPGTDGQKMSKSYNNTINMFVTKKKLKEQVMSIVTDSTPLEE 225

Query: 265 ---DDADVVSFAKRLTTLPMS-EIDRMAKLQGKEINEAKKII 302
               D ++         +    E+             AK  +
Sbjct: 226 PKNPDNNIAKIYALFNNIDKQNELKDKFLAGNFGYGHAKTEL 267


>gi|154252809|ref|YP_001413633.1| tryptophanyl-tRNA synthetase II [Parvibaculum lavamentivorans DS-1]
 gi|154156759|gb|ABS63976.1| tryptophanyl-tRNA synthetase [Parvibaculum lavamentivorans DS-1]
          Length = 333

 Score = 47.1 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 48/305 (15%), Positives = 90/305 (29%), Gaps = 50/305 (16%)

Query: 45  TASSLHAGHLTQ-LMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
           T   LH GH    L      Q++ H+   L+    ++  +     + RR +    +    
Sbjct: 13  TGP-LHIGHFAGSLRNRLRFQES-HEQFLLLADTQALTDNAHDPGKVRRNVTEVALDYLA 70

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR- 162
             I             KT   + +    L  +  +  L  +            + +R+R 
Sbjct: 71  TGI----------DPEKTTICLQSGLPALAELSML-YLNFVTVSRLERNPTIKDEIRARG 119

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK----- 217
             R+    FL   Y   QA D       +   +   G DQ   I    ++  R+      
Sbjct: 120 FGRDIPAGFL--CYPAAQAADITA----FKATVVPVGEDQAPLIEQTNEIVRRINATAGK 173

Query: 218 ----TPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYW------RNIDD 266
                 +     +  L    G  KM K+   AI L+          +          I+D
Sbjct: 174 TILLEAQAIIPKTGRLPGIDGKAKMSKSAGNAISLSAPPEVISTAVRAMFTDPNHLRIED 233

Query: 267 ------ADVVSFAKRLTT--LPMSEIDRMAKLQGKEINEAKKIIATEITTMV-----HGR 313
                   V +F        + + E+    +  G    + K+ +   +  ++     H  
Sbjct: 234 PGQVEGNVVFAFLDAFDEDLITLEELKAQYRQGGLGDGKIKRRLDEILQALIGPIRTHRE 293

Query: 314 EEAEK 318
           E A+ 
Sbjct: 294 ELAKD 298


>gi|109895056|sp|Q6TGS6|SYYC_DANRE RecName: Full=Tyrosyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Tyrosyl--tRNA ligase; Short=TyrRS
 gi|50370114|gb|AAH76558.1| Tyrosyl-tRNA synthetase [Danio rerio]
 gi|94732109|emb|CAK04465.1| tyrosyl-tRNA synthetase [Danio rerio]
 gi|158254328|gb|AAI54289.1| Yars protein [Danio rerio]
 gi|182890550|gb|AAI64691.1| Yars protein [Danio rerio]
          Length = 529

 Score = 47.1 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 45/232 (19%), Positives = 72/232 (31%), Gaps = 25/232 (10%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            L  R    ++     L  +  +  +  Y G   T    H  +   +  +    K G + 
Sbjct: 12  QLITRNL-QEVLGEERLKEILKERELKVYWGTATTGKP-HVAYFVPMSKIADFLKAGCEV 69

Query: 71  ISLMGGGTSII---GDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
             L     + +     P    E R     Q I+  +E I       +K+  G        
Sbjct: 70  TILFADLHAYLDNMKAPWELLELRVKYYEQVIKAMLESIGVPLDK-LKFVKGTDYQ---- 124

Query: 128 NETWLCSIKYIDLLREIGSFFSV--NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
               L     +D+ R + S  +    +    E V+   + E  L      Y  LQA D  
Sbjct: 125 ----LSREYTLDVYR-LSSMVTEHDAKKAGAEVVK---QVEHPL-LSGLLYPGLQALDEE 175

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
            L        Q GG DQ             L   K   L +P++   +G+KM
Sbjct: 176 YLK----VDAQFGGVDQRKIFTLAEKYLPSLGYTKRSHLMNPMVPGLTGSKM 223


>gi|41151996|ref|NP_958473.1| tyrosyl-tRNA synthetase, cytoplasmic [Danio rerio]
 gi|37681971|gb|AAQ97863.1| tyrosyl-tRNA synthetase [Danio rerio]
 gi|94733604|emb|CAK04282.1| tyrosyl-tRNA synthetase [Danio rerio]
          Length = 529

 Score = 47.1 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 45/232 (19%), Positives = 72/232 (31%), Gaps = 25/232 (10%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            L  R    ++     L  +  +  +  Y G   T    H  +   +  +    K G + 
Sbjct: 12  QLITRNL-QEVLGEERLKEILKERELKVYWGTATTGKP-HVAYFVPMSKIADFLKAGCEV 69

Query: 71  ISLMGGGTSII---GDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
             L     + +     P    E R     Q I+  +E I       +K+  G        
Sbjct: 70  TILFADLHAYLDNMKAPWELLELRVKYYEQVIKAMLESIGVPLDK-LKFVKGTDYQ---- 124

Query: 128 NETWLCSIKYIDLLREIGSFFSV--NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
               L     +D+ R + S  +    +    E V+   + E  L      Y  LQA D  
Sbjct: 125 ----LSREYTLDVYR-LSSMVTEHDAKKAGAEVVK---QVEHPL-LSGLLYPGLQALDEE 175

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
            L        Q GG DQ             L   K   L +P++   +G+KM
Sbjct: 176 YLK----VDAQFGGVDQRKIFTLAEKYLPSLGYTKRSHLMNPMVPGLTGSKM 223


>gi|160943537|ref|ZP_02090770.1| hypothetical protein FAEPRAM212_01028 [Faecalibacterium prausnitzii
           M21/2]
 gi|158445216|gb|EDP22219.1| hypothetical protein FAEPRAM212_01028 [Faecalibacterium prausnitzii
           M21/2]
          Length = 366

 Score = 47.1 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 44/244 (18%), Positives = 72/244 (29%), Gaps = 51/244 (20%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     LQ TG +  I +M      I D     +      +   ++
Sbjct: 24  PTGR-LHVGHYVGSLKERVRLQNTGEYDEIFIM------IADAQALTD-----NADNPEK 71

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIG---------SFFSVNR 152
             + I  +   ++  G       +            +  L E+          S    N 
Sbjct: 72  VRQNILQVALDYLACGLDPNKVHIF-------IQSMVPQLTELSFYYQNLVTVSRLQRNP 124

Query: 153 MLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQW--------- 203
            +  E      +    + F  F Y I QA D           +  G  DQ          
Sbjct: 125 TVKSEIQMRNFEASIPVGF--FCYPISQAADITAFKA---TTVPAG-EDQKPMIEQCCEI 178

Query: 204 ---GNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQY 260
               N + G  L E        A    L       KM K+L   I+L++E   P +  + 
Sbjct: 179 VHKFNSVYGETLVEPEIVLPQNAACLRLPGIDGKAKMSKSLGNCIYLSEE---PEDIEKK 235

Query: 261 WRNI 264
            +++
Sbjct: 236 VKSM 239


>gi|225573106|ref|ZP_03781861.1| hypothetical protein RUMHYD_01297 [Blautia hydrogenotrophica DSM
           10507]
 gi|225039547|gb|EEG49793.1| hypothetical protein RUMHYD_01297 [Blautia hydrogenotrophica DSM
           10507]
          Length = 359

 Score = 47.1 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 40/236 (16%), Positives = 69/236 (29%), Gaps = 35/236 (14%)

Query: 44  LTASSLHAGHLTQ-LMLLFWLQKTGH--KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    L     LQ +G   K   ++    ++  +     + R  +    + 
Sbjct: 22  PTGR-LHVGHYVGSLRGRVELQNSGEFDKVFIMIADAQALTDNFDDPSKVRANITEVALD 80

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
                +             KT   + +    L  + +  +     S    N  +  E  +
Sbjct: 81  YLACGL----------DPAKTTIFIQSQIPQLTELTFYYMNLVTLSRLERNPTVKAEIKQ 130

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQW------------GNIIC 208
              ++   + FL   Y + QA D      +    + +G  DQ              N + 
Sbjct: 131 KNFEKSLPMGFL--TYPVSQASDITAFLAD---TVPVG-EDQLPMIEQTREIVRSFNNLY 184

Query: 209 GIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNI 264
           G  L E        A +  L  T    KM K+L   I+L      P         +
Sbjct: 185 GETLVEPKAVLPSNAASLRLPGTDGKAKMSKSLGNCIYL---ADQPDEIRTKIMGM 237


>gi|41409551|ref|NP_962387.1| tryptophanyl-tRNA synthetase [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|41398382|gb|AAS06003.1| TrpS [Mycobacterium avium subsp. paratuberculosis K-10]
          Length = 343

 Score = 47.1 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 53/308 (17%), Positives = 99/308 (32%), Gaps = 47/308 (15%)

Query: 32  SQGVVTAYIGYDLTASSLHAGHLT----QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFR 87
           + G    + G   T+ SLH G+      Q + L             +    +I       
Sbjct: 4   ATGSRRIFSGVQPTSDSLHLGNALGAISQWVTLQDDWGDDWDAFFCVVDLHAITIAQDPA 63

Query: 88  DESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSF 147
              RR + +              + ++  G     + +          +   +L     F
Sbjct: 64  ALRRRTLVTA-------------AQYLALGIDPARSTVFVQSHVPAHTQLAWVLGCFTGF 110

Query: 148 FSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNII 207
              +RM  F+    R +   S +   F Y +LQA D +     YD  L   G DQ  ++ 
Sbjct: 111 GQASRMTQFKDKSLR-QGADSTTVGLFTYPVLQAADVLA----YDTGLVPVGEDQRQHLE 165

Query: 208 CGIDLGERLKT--PKLFALTSPLLTTASGT---------KMGKTLSGAIWLNKEMTSPYN 256
              D+ +R     P  F +   L+   +           KM K+ S    L   +  P  
Sbjct: 166 LARDVAQRFNARFPDTFVVPEMLIPKVTAKIYDLADPTSKMSKSASTDAGLINLLDDPAL 225

Query: 257 FWQYWRN-IDDAD------------VVSFAKRLTTLPMSEIDRMAK-LQGKEINEAKKII 302
             +  R+ + D++            V +     + +   +ID++ +   G+   + KK  
Sbjct: 226 SAKKIRSAVTDSEREIRFDTDAKPGVSNLLSIQSAVSGVDIDKLVQGYAGRGYGDLKKDT 285

Query: 303 ATEITTMV 310
           A  +   V
Sbjct: 286 ADAVVEFV 293


>gi|85705167|ref|ZP_01036267.1| RNA pseudouridylate synthase family protein [Roseovarius sp. 217]
 gi|85670489|gb|EAQ25350.1| RNA pseudouridylate synthase family protein [Roseovarius sp. 217]
          Length = 269

 Score = 47.1 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 12/49 (24%), Positives = 22/49 (44%), Gaps = 1/49 (2%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
             G  +  +I +AG A S  EA R +++  + +N   +    L +   D
Sbjct: 12  PEGERIAKVIARAGIA-SRREAERLIEAGRVTVNGQKVLRAALNVTPAD 59


>gi|284048605|ref|YP_003398944.1| tryptophanyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731]
 gi|283952826|gb|ADB47629.1| tryptophanyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731]
          Length = 353

 Score = 47.1 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 37/236 (15%), Positives = 76/236 (32%), Gaps = 35/236 (14%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGH--KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +     LQ +G   +   ++    ++  +    ++ R+ +    + 
Sbjct: 11  PTG-HLHVGHFVGSLQERVLLQNSGKFDEIYFMIADAQALTDNAENPEKVRQNVLQVALD 69

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
                I    ++            +        S  Y+DL+    +    N  +  E  +
Sbjct: 70  YLAVGIDPQKATIFIQSLIPELFEL--------STYYMDLVTV--ARVQRNPTVKAEIQQ 119

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
              +    L F  F Y + QA D       +   + +G  DQ   +    ++  +  +  
Sbjct: 120 KNFEASVPLGF--FCYPVSQAADITAFHATH---VPVG-EDQKPMLEQCREIVHKFNSVY 173

Query: 221 LFALTSP-----------LLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNI 264
              LT P            L    G  KM K+L   I+L+ +  +     +   ++
Sbjct: 174 GETLTEPDIVLPSNKACLRLPGLDGKAKMSKSLGNCIYLSDDADT---IKKKVMSM 226


>gi|91093979|ref|XP_969006.1| PREDICTED: similar to Tryptophanyl-tRNA synthetase, cytoplasmic
           (Tryptophan--tRNA ligase) (TrpRS) (Interferon-induced
           protein 53) (IFP53) (hWRS) [Tribolium castaneum]
 gi|270010919|gb|EFA07367.1| hypothetical protein TcasGA2_TC016342 [Tribolium castaneum]
          Length = 411

 Score = 47.1 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 41/241 (17%), Positives = 81/241 (33%), Gaps = 29/241 (12%)

Query: 15  RGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG +    +   +  L   G     Y G   +++S+H GHL   +   WLQ   + P+ +
Sbjct: 76  RGIVFSHRDLHSILTLHESGKPFYLYTGRGPSSNSMHVGHLVPFIFCKWLQDIFNVPLVI 135

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                         D+ + + +  +++E  +         I  G       M ++  ++ 
Sbjct: 136 -----------QLTDDEKFLWKDLKMEEVHKMTMENAKDIIAVGFDPEKTFMFSDLNYIG 184

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA-----YDFVELA 188
                +      +   + R ++F  V+     + S    +  +  +QA       F  + 
Sbjct: 185 Q--CPEF---YQNMVRIQRCVTFNQVKGIFGFDDSSVIGKVAFPAVQATPALSTSFPHIF 239

Query: 189 --KNYDCRLQMGGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTASGTKMGKTLSG 243
             K   C +     DQ        D+  R+   K   L +   P L  A  TKM  +   
Sbjct: 240 KGKKVPCLIPC-AIDQDPYFRMTRDVAPRIGFKKPALLHSTFFPALQGAQ-TKMSASDPN 297

Query: 244 A 244
           +
Sbjct: 298 S 298


>gi|328907882|gb|EGG27645.1| ribosomal RNA large subunit methyltransferase J [Propionibacterium
           sp. P08]
          Length = 245

 Score = 47.1 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 12/58 (20%), Positives = 27/58 (46%), Gaps = 1/58 (1%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD-FDSTGNIKLSF 406
           M L   +V+AG A S   A R ++   + +N  +++   +++   D   +   + +S 
Sbjct: 1   MRLDQALVEAGLARSRTLATRLVREGRVTVNGIVVTKPAMKVSASDNLVADEEVWVSR 58


>gi|291237226|ref|XP_002738536.1| PREDICTED: tyrosyl-tRNA synthetase-like [Saccoglossus kowalevskii]
          Length = 484

 Score = 47.1 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 41/234 (17%), Positives = 67/234 (28%), Gaps = 22/234 (9%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R     + + R L +L     +  Y G   T    H  +   +  +    +      
Sbjct: 14  LITRNLQEVLGDDRLLQMLKDGKDINIYWGTATTGKP-HVAYFVPMSKIADFLRADCHVT 72

Query: 72  SLMGGGTSII---GDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
            L     + +     P      R       I+  +E I       +K+  G         
Sbjct: 73  ILFADLHAYLDNMKAPWELLALRTQYYEAAIKGMLESIGVPLEK-LKFIRGTEFE----- 126

Query: 129 ETWLCSIKYIDLLREIGSFFSV-NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
              L     +D+ R          +    E V+   + +  L      Y  LQA D   L
Sbjct: 127 ---LSREYTLDVYRLTSLVTQHDAKKAGAEVVK---QVDHPL-LSGLLYPGLQALDEEYL 179

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
                   Q GG DQ            +L   K   L +P++   +G KM  + 
Sbjct: 180 K----VDCQFGGVDQRKIFTFAEKYLPQLGYKKRIHLMNPMVPGLTGAKMSSSE 229


>gi|156094906|ref|XP_001613489.1| tyrosyl-tRNA synthetase [Plasmodium vivax SaI-1]
 gi|148802363|gb|EDL43762.1| tyrosyl-tRNA synthetase, putative [Plasmodium vivax]
          Length = 380

 Score = 47.1 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 43/239 (17%), Positives = 86/239 (35%), Gaps = 26/239 (10%)

Query: 20  QISNPRELDI-LCSQGVVTAYIGYDLTASSLHA--GHLTQLMLLFWLQKTGHKPISLMGG 76
           +   P EL   L  +  +  Y G++ +   +H   G L +  ++  L   G + I  +  
Sbjct: 47  ECIQPEELKARLLLKRRLVCYDGFEPSGR-MHIAQG-LLKCQIVNKLTSNGCRFIFWIAD 104

Query: 77  GTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIK 136
             + + +    D  +         E  +       + +++     +     NE W     
Sbjct: 105 WFAQLNNKMSGDLKKIKKVGMYFIEVWKSCGMNMQN-VEFLWASEEINKKPNEYW----- 158

Query: 137 YIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQ 196
              L+ +I   F++NR+     +  R + E++    +  Y  +Q  D   L  +  C+L 
Sbjct: 159 --SLVIDISKSFNINRIKRCLKIMGRSEGEENY-CSQILYPCMQCADIFFLNVDI-CQL- 213

Query: 197 MGGSDQWGNIICGIDLGERLKTPKL-----FALTSPLLTTASGTKMGKT-LSGAIWLNK 249
             G DQ    +   +  E  K  K        +   LL      KM K+  + AI+++ 
Sbjct: 214 --GIDQRKVNMLAREYCEIKKMKKKPIILSHQMLPGLLEGQE--KMSKSDENSAIFMDD 268


>gi|67483664|ref|XP_657052.1| tryptophanyl-tRNA synthetase [Entamoeba histolytica HM-1:IMSS]
 gi|56474253|gb|EAL51632.1| tryptophanyl-tRNA synthetase, putative [Entamoeba histolytica
           HM-1:IMSS]
          Length = 385

 Score = 47.1 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 50/320 (15%), Positives = 99/320 (30%), Gaps = 40/320 (12%)

Query: 15  RGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +    LD +     +  Y G   ++ +LH GHL   +   +LQ      + +
Sbjct: 55  RGLFFCHRDINAVLDDVEKGNKIYLYTGRGPSSDALHLGHLIPFIFTKYLQDAFDCQLVV 114

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                         D+ + + +   I +  +         I  G       +  + T++ 
Sbjct: 115 -----------QLTDDEKYLWKPVTIADTEKYAIENIKDIIASGLNPKKTFIFTDYTYME 163

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA--KNY 191
            +    ++ +I S  + N++      +      + +SF            F  L   +  
Sbjct: 164 RMYP--VVTKIQSRVTFNQVKGIFGFQPHHNLGK-ISFPAIQAAPAFPESFPHLFGKQKI 220

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALT---SPLLTTASGTKMGKTLSG-AIWL 247
            C +     DQ        D  E L   K   +     P L  + G KM  +    AI+L
Sbjct: 221 RCLIPC-AIDQDPYFRMTRDHAESLGAYKPSLIMSKFFPALQGSMG-KMSASDPNSAIYL 278

Query: 248 --------NKEMTSPY-------NFWQYWRNIDDADVVSFAKRL--TTLPMSEIDRMAKL 290
                   +K     Y        F +   N+DD     + +        + +I    + 
Sbjct: 279 IDTPQQIADKINNHAYCSVQDIKEFKKNGTNVDDDVPYQYLRFFLNDDQQLEKIKNDYES 338

Query: 291 QGKEINEAKKIIATEITTMV 310
                 + K I+  ++  +V
Sbjct: 339 AQMMPQDVKNILIHQLQELV 358


>gi|313679792|ref|YP_004057531.1| tryptophanyl-tRNA synthetase [Oceanithermus profundus DSM 14977]
 gi|313152507|gb|ADR36358.1| tryptophanyl-tRNA synthetase [Oceanithermus profundus DSM 14977]
          Length = 334

 Score = 47.1 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 39/292 (13%), Positives = 91/292 (31%), Gaps = 54/292 (18%)

Query: 41  GYDLTASSLHAGHLTQLML--LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQE 98
           G   T + +H G+    +   +   ++ G   +  +    ++  +P   D  R  +  + 
Sbjct: 10  GIQPTGA-IHIGNYLGAIKQWVEIGERLGKDALFCIVDYHALT-NPDAYDPER--LPQRT 65

Query: 99  IQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
            +  +  +             K    + ++      + +I       +   V  +     
Sbjct: 66  FEAALANMAAGL------DPEKITLFVQSHVPEHTELSWI-----FTTQTPVGDLTRMTQ 114

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
            + +  + +S+      Y +LQA D + + K     +   G DQ  ++    ++  R   
Sbjct: 115 YKDKSAKLKSVPAGLLMYPVLQAADIL-IYKADTVPV---GEDQLQHLELTREIARRFN- 169

Query: 219 PKLFALTSP----LL-------TTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDD 266
              F  T P    LL           G  KM K++   I   + +  P + W+  R    
Sbjct: 170 -HAFGDTFPEPKALLNPKAPRVPGIDGAAKMSKSVGNTI---ELLEEPKSIWEKLRAAPT 225

Query: 267 A---------------DVVSFAKRLTTLPMSE-IDRMAKLQGKEINEAKKII 302
                            +  +    +   + E +    +  G    + KK++
Sbjct: 226 DPARVRRNDPGDPSRCLIFKYHTYFSPPEVQEAVAEGCRTAGIGCVDCKKLL 277


>gi|50425337|ref|XP_461262.1| DEHA2F20988p [Debaryomyces hansenii CBS767]
 gi|49656931|emb|CAG89651.1| DEHA2F20988p [Debaryomyces hansenii]
          Length = 467

 Score = 47.1 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 28/131 (21%), Positives = 52/131 (39%), Gaps = 17/131 (12%)

Query: 291 QGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSR-G 349
            GK I + +K  A   T   HG    E       + F  ++ S      S+   EV+   
Sbjct: 37  HGKTIYQ-QKWTAKAETRAYHGEHLTES---RWKQIFKPNLESVAQLDASLKGVEVAPTP 92

Query: 350 MGLLT----------LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDST 399
           M L T           + +A FA+S  +AR+ +    +K+N  ++ +    ++  D  + 
Sbjct: 93  MPLQTYAALEKRLEFALFRAMFASSVRQARQFILGGHVKVNGVVVKHPSFPLQSGDVFNV 152

Query: 400 G--NIKLSFGK 408
               + L+ G+
Sbjct: 153 KPEKVLLAMGR 163


>gi|295107048|emb|CBL04591.1| tryptophanyl-tRNA synthetase [Gordonibacter pamelaeae 7-10-1-b]
          Length = 348

 Score = 47.1 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 43/259 (16%), Positives = 70/259 (27%), Gaps = 37/259 (14%)

Query: 22  SNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGG--- 77
           S+    D+       T   G   T   LH GH    +     LQ  G     ++      
Sbjct: 13  SDEIRADLPEHPEKYTMLTGDRPTGR-LHLGHYFGTIRERVALQDLGITTRIIIADYQVI 71

Query: 78  TSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKY 137
           T      +  D  R M     + + +        + I      +    LN          
Sbjct: 72  TDRDTTANIADNVRNM-----VVDYLACGIDPAKTII---FTHSAVPALN-------QLM 116

Query: 138 IDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQM 197
           +  L  +     +           +     +L+ L   Y + QA D   L    +     
Sbjct: 117 LPFLSLVTESELLRNPTVK---AEQDASGHALTGLLLTYPVHQACD--ILFCKGNIV--P 169

Query: 198 GGSDQWGNIICGIDLGERLKTPKLFALT--------SPLLTTASGTKMGKTLSGAIWLNK 249
            G DQ  +I     +  R                  +P +    G KM K+   AI L+ 
Sbjct: 170 VGKDQMPHIEQTRQIARRFNERYGHVFPEPDGLLNDAPAIPGLDGRKMSKSYGNAISLSA 229

Query: 250 EMTSPYNFWQYWRNIDDAD 268
                    +   +  DAD
Sbjct: 230 TDAETAKLIKK--SQTDAD 246


>gi|187734584|ref|YP_001876696.1| tryptophanyl-tRNA synthetase [Akkermansia muciniphila ATCC BAA-835]
 gi|187424636|gb|ACD03915.1| tryptophanyl-tRNA synthetase [Akkermansia muciniphila ATCC BAA-835]
          Length = 321

 Score = 47.1 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 54/342 (15%), Positives = 109/342 (31%), Gaps = 55/342 (16%)

Query: 41  GYDLTASSLHAGHLTQLM-LLFWLQKTGHKPISLMG-GGTSIIGDPSFRDESRRMMRSQE 98
           G   +   LH G+    M     +Q++G     L      S + D +   E+   + +  
Sbjct: 6   GLQPSGK-LHVGNYFGAMEPAVRMQESGESFYFLADYHAMSTVHDANALRENCSNLATDF 64

Query: 99  IQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
           +   ++  K +F         ++    +N   W+           + +   +  +    S
Sbjct: 65  LAVGLDPEKCVFFR-------QSAVPEVNELAWI-----------LSTVCPMGLLERCHS 106

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
            + ++ +  S S   F Y +L A D +     YD  L   G DQ  ++    DL  ++  
Sbjct: 107 YKDKIAKGFSPSNALFTYPVLMAADILM----YDSDLVPVGKDQKQHLEVTRDLAGKMN- 161

Query: 219 PKLFA-LTSPL-----------LTTASGTKMGKTLSGA--IWLNKEMTSPYNFWQYWRNI 264
            + F   T  L           +    G KM K+ +    I+  ++            + 
Sbjct: 162 -EQFGEGTCKLPDALIAESTAIVPGLDGQKMSKSYNNTLPIFGEEKAVRKLIMRIPTDST 220

Query: 265 DDAD--------VVSFAKRL-TTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREE 315
              D        ++   K   +     ++ R  +  G    + KK +  +          
Sbjct: 221 PVEDPKPTEGSVILQLYKLFASAQGYEDMVRGFQNGGCGYGDFKKRL-FDAYWEYFRPAR 279

Query: 316 AEKAATAAMECFDMSIHSQHM----PTISISKDEVSRGMGLL 353
             +A   A + +      +       T S+  D V R +GL 
Sbjct: 280 ERRAELEANQDYVRRTLEEGARKARETASVVLDRVRRAVGLA 321


>gi|120402567|ref|YP_952396.1| tryptophanyl-tRNA synthetase [Mycobacterium vanbaalenii PYR-1]
 gi|119955385|gb|ABM12390.1| tryptophanyl-tRNA synthetase [Mycobacterium vanbaalenii PYR-1]
          Length = 341

 Score = 47.1 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 41/240 (17%), Positives = 82/240 (34%), Gaps = 30/240 (12%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   T+ SLH G+    +  +   + G+     +    +I                + ++
Sbjct: 16  GAQPTSDSLHLGNALGAVAQWVGLQEGNDAYFCVVDLHAIT----------VSQDPETLR 65

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
              ++     + ++  G     A +          +   +L     F   +RM  F+  +
Sbjct: 66  ---KRTLATAAQYLALGVDPDRATVFVQSHVPAHAELAWVLGCFTGFGQASRMTQFKD-K 121

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT-- 218
           S+ +   S +   F Y +L A D +     YD  L   G DQ  ++    DL +R+    
Sbjct: 122 SQKQGADSTTVGLFTYPVLMAADVLL----YDTGLVPVGEDQRQHLELARDLAQRINARF 177

Query: 219 ------PKLFA--LTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRN-IDDAD 268
                 P+      T+ +      T KM K+      L   +  P    +  R+ + D++
Sbjct: 178 PGTFVVPEAMIPKATAKIYDLQDPTAKMSKSADSDAGLISLLDDPAKTAKKIRSAVTDSE 237


>gi|15639620|ref|NP_219070.1| tryptophanyl-tRNA synthetase [Treponema pallidum subsp. pallidum
           str. Nichols]
 gi|189025858|ref|YP_001933630.1| tryptophanyl-tRNA synthetase [Treponema pallidum subsp. pallidum
           SS14]
 gi|6094418|sp|O83640|SYW_TREPA RecName: Full=Tryptophanyl-tRNA synthetase; AltName:
           Full=Tryptophan--tRNA ligase; Short=TrpRS
 gi|3322931|gb|AAC65607.1| tryptophanyl-tRNA synthetase (trsA) [Treponema pallidum subsp.
           pallidum str. Nichols]
 gi|189018433|gb|ACD71051.1| tryptophanyl-tRNA synthetase [Treponema pallidum subsp. pallidum
           SS14]
 gi|291060003|gb|ADD72738.1| tryptophan-tRNA ligase [Treponema pallidum subsp. pallidum str.
           Chicago]
          Length = 337

 Score = 47.1 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 37/223 (16%), Positives = 76/223 (34%), Gaps = 39/223 (17%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGG-TSIIGDPSFRDESRRMMRSQEIQEN 102
            T   LH GH    +      ++ H+   ++    T        +      +  + + + 
Sbjct: 10  PTGR-LHLGHYAGSLGTRLRIQSEHECFFIIADLHTLTTRHGRAQLAELPALVRELVLDY 68

Query: 103 IEKIKGIFSSFIKYGTGKTD----ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
           +        + I   +   +    A +  N   +  ++ I  L+E+    +++       
Sbjct: 69  LACGIDAQRAVIYLQSAVPEVTELAFIFANLVTVPRLQRIPSLKEMAQAANLSE------ 122

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
                     L F    Y +LQA D + LA+ +   +   G D   ++    ++ +R   
Sbjct: 123 ----------LPFGLLGYPVLQAADIL-LARAHLVPV---GKDNESHVELTREVAKRFNR 168

Query: 219 PKLFALTSPL----------LTTASGT-KMGKTLSGAIWLNKE 250
             L+    PL          L    G  KM K+L  AI+L+ +
Sbjct: 169 --LYGEVFPLPRALLSDCATLVGTDGQAKMSKSLGNAIFLSDD 209


>gi|158522767|ref|YP_001530637.1| tryptophanyl-tRNA synthetase [Desulfococcus oleovorans Hxd3]
 gi|158511593|gb|ABW68560.1| tryptophanyl-tRNA synthetase [Desulfococcus oleovorans Hxd3]
          Length = 329

 Score = 47.1 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 48/301 (15%), Positives = 92/301 (30%), Gaps = 55/301 (18%)

Query: 33  QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGG---TSIIGDPSFRDE 89
            G      G   T   LH G+L   +  +   +  ++    +      TS   DP     
Sbjct: 2   SGKKRILSGMRPTGP-LHLGNLHGALNQWVALQDEYECFYFVADWHALTSNYEDPVG--- 57

Query: 90  SRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFS 149
               +    ++   + +    S        +   L + +       ++ +L   +     
Sbjct: 58  ----LDEFTLEMAADWLSAGLS-------PEKSTLFVQSHV----KEHAELFLILSMITP 102

Query: 150 VNRMLSFESVRSRLKR--EQSLSFLEFN-YMILQAYDFVELAKNYDCRLQMGGSDQWGNI 206
           ++ +    + + ++ +   + +S   F  Y +LQA D +     Y       G DQ  ++
Sbjct: 103 LSWLERNPTYKDQMAQLVGKDVSTFGFLGYPVLQAADIIM----YLADAVPVGEDQIPHV 158

Query: 207 ICGIDLGERLK-------TPKLFALTSPL--LTTASGTKMGKTLSGAIWLNKEMTSPYNF 257
               ++  R               LT     +      KM K+   AI+L     +    
Sbjct: 159 EITREIARRFNHLYGPVFREPQVLLTKATARILGIDRRKMSKSYDNAIYLGDPPETIAE- 217

Query: 258 WQYWRNIDDA--------------DVVSFAKRLTT-LPMSEIDRMAKLQGKEINEAKKII 302
            +  R I D               +V  F K  T    + EID   +       E KK +
Sbjct: 218 -RTSRMITDPQRARKSDPGDPGVCNVFEFHKLYTDPEKVKEIDAGCRSAALGCVECKKNL 276

Query: 303 A 303
           A
Sbjct: 277 A 277


>gi|317495715|ref|ZP_07954080.1| tryptophanyl-tRNA synthetase [Gemella moribillum M424]
 gi|316914168|gb|EFV35649.1| tryptophanyl-tRNA synthetase [Gemella moribillum M424]
          Length = 338

 Score = 46.7 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 47/341 (13%), Positives = 94/341 (27%), Gaps = 50/341 (14%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSF-RDESRRMMRSQEIQEN 102
            T   LH GH    +      +        +     +I D     D +      + IQ  
Sbjct: 11  PTGK-LHLGHYVGSLKNRVALQNEKDTDIFI-----MIADQQALTDNADNP--EKVIQNI 62

Query: 103 IEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR 162
            E      +  I     K+   + +    L  +    +     S    N  +  E    +
Sbjct: 63  TEVALDYLAVGID--PTKSTVFIQSQIPQLAELYMYYMNLVTVSRLQRNPTVKQEINDKK 120

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK---TP 219
                   F  F Y + QA D       +   + +G  DQ   +    ++          
Sbjct: 121 FGESIPAGF--FTYPVSQAADITAFKATH---VPVG-EDQKPMLEQTREIVRDFNRTYNK 174

Query: 220 KLFALTSPLLT--------TASGT-KMGKTLSGAIWLNKEMTSPYNFWQYW------RNI 264
           ++  L   +L            G  KM K+L+  I+L     +                +
Sbjct: 175 EVLVLPEIVLPPKNHARLVGIDGQGKMSKSLNNGIYLGDNEENIKAKIMKMYTDPNHIRV 234

Query: 265 DD------ADVVSFAKRLTTLPMS--EIDRMAKLQGKEINEAKKIIATEITTMV------ 310
           +D        V ++            E+    K  G    + K+ +  E+          
Sbjct: 235 EDPGQVEGNVVFTYLDIFDPRTDEVAELKEHYKRGGLGDMKLKRRL-NEVMQEYLLPIRE 293

Query: 311 HGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMG 351
              E A+  A         S  ++ +   ++ + + + G+ 
Sbjct: 294 RREEFAKDKAEVYNMLKAGSEKAEKVAAATLDEVKDAMGIN 334


>gi|39996932|ref|NP_952883.1| tryptophanyl-tRNA synthetase [Geobacter sulfurreducens PCA]
 gi|39983820|gb|AAR35210.1| tryptophanyl-tRNA synthetase [Geobacter sulfurreducens PCA]
 gi|298505944|gb|ADI84667.1| tryptophanyl-tRNA synthetase [Geobacter sulfurreducens KN400]
          Length = 327

 Score = 46.7 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 29/173 (16%), Positives = 57/173 (32%), Gaps = 32/173 (18%)

Query: 176 YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-------TPKLFALT-SP 227
           Y +L A D + L +     +   G DQ  ++    ++  R               LT +P
Sbjct: 131 YPVLMAAD-IILYRAAKVPV---GHDQLPHLEITREIARRFNYLYREVFPEPAALLTETP 186

Query: 228 LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNI--------------DDADVV-SF 272
            +    G KM K+   +I+L++         +   ++               D  V  + 
Sbjct: 187 KVLGLDGRKMSKSYGNSIYLSETAEETS---KKIMSMVTDTQRVRRSDPGEPDRCVAFNL 243

Query: 273 AKRLT-TLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAM 324
            +        +EI    +       + KKI+A  +   +     A++   AA 
Sbjct: 244 HRLYVPDDERAEIVESCRGATIGCVDCKKILARHLVETL-APFRAKRVELAAR 295


>gi|317124330|ref|YP_004098442.1| tryptophanyl-tRNA synthetase [Intrasporangium calvum DSM 43043]
 gi|315588418|gb|ADU47715.1| tryptophanyl-tRNA synthetase [Intrasporangium calvum DSM 43043]
          Length = 344

 Score = 46.7 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 46/297 (15%), Positives = 90/297 (30%), Gaps = 49/297 (16%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPS-FRDESRRMMRSQEI 99
           G   T+ SLH G+    ++ +   +  H     +    S+   P       R    + + 
Sbjct: 18  GMQPTSDSLHLGNYIGALVEWVKLQESHDAFYFVADLHSLTVFPDPGVLRERTRATAAQF 77

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
                           +    T+        W        +L  +  F   +RM      
Sbjct: 78  IAGGVDPTRSVLFVQSHVAQHTE------LAW--------VLSTLTGFGEASRMTQ---F 120

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT- 218
           + +  +    +   F Y +L A D +     YD  +   G DQ  ++    DL  R    
Sbjct: 121 KDKTAKGAVANVGLFTYPVLMAADILI----YDPAVVPVGEDQRQHLELSRDLAGRFNQR 176

Query: 219 -------PKLFALTSPL----LTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRN-IDD 266
                  P+   +        L   +  KM K+ +    L   +  P    +  R+ + D
Sbjct: 177 FGETLVVPEPHIIREIAKIQDLQEPT-AKMSKSAASDSGLISLLEDPARIAKKIRSAVTD 235

Query: 267 AD------------VVSFAKRLTTLPMSEIDRMAKL-QGKEINEAKKIIATEITTMV 310
            +            V +       L  + I ++    +GK   + KK +A  + + +
Sbjct: 236 TEREIRYDPAAKPGVSNLLSIHHALSGTPIAQLEAAFEGKGYGDLKKEVADVVVSAI 292


>gi|99081768|ref|YP_613922.1| pseudouridine synthase, Rsu [Ruegeria sp. TM1040]
 gi|99038048|gb|ABF64660.1| Pseudouridine synthase Rsu [Ruegeria sp. TM1040]
          Length = 422

 Score = 46.7 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 11/51 (21%), Positives = 21/51 (41%), Gaps = 1/51 (1%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
             G  +  ++ +AG   S  EA R +    + +N  +I +  L +   D  
Sbjct: 59  QDGDRIAKVLSRAG-VASRREAERMIAEGRVAVNGKVIDSPALNVTNLDRI 108


>gi|308804992|ref|XP_003079808.1| putative tryptophanyl-tRNA synthetase (ISS) [Ostreococcus tauri]
 gi|116058265|emb|CAL53454.1| putative tryptophanyl-tRNA synthetase (ISS) [Ostreococcus tauri]
          Length = 481

 Score = 46.7 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 66/418 (15%), Positives = 138/418 (33%), Gaps = 82/418 (19%)

Query: 15  RGFIHQISNPRELDILCSQ----GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           RG   Q    RELD++ +          Y G   ++ SLH GHL       WLQ     P
Sbjct: 63  RG---QFFAHRELDVILNAYEKGERFYLYTGRGPSSESLHLGHLIPFHFTKWLQDAFKVP 119

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           + +              D+ + + +  E++E     +      I  G       + ++ +
Sbjct: 120 LVI-----------QLTDDEKFLWKDLELEECERLARENAKDIIACGFDPKRTFIFSDVS 168

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEF-------NYMILQAYD 183
           ++ +  Y ++++ I    ++N++            E ++  + F       ++     + 
Sbjct: 169 YMSTPMYKNMMK-IAKCVTLNQV--KGIFG--FTGESNIGQVGFPPTQAAPSFPDCFPHM 223

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFAL---TSPLLTTASGTKMGKT 240
           F E   +  C +     DQ        D+  R+   K   +     P L   +G KM  +
Sbjct: 224 FGESKTSLRCLIPC-AIDQDPYFRMTRDVAPRIGGYKPALIESRFFPALKGENG-KMSAS 281

Query: 241 -LSGAIWLN------KEMTSPYNFWQYWRNIDD----------ADVVSFAKRLTTLPMSE 283
             + AI++       K   + Y F    + ++D               +          E
Sbjct: 282 DATSAIYVTDTPKEIKSKVNKYAFSGGQQTVEDHRRLGGNLDTDISWKWLNFFLD-DDEE 340

Query: 284 IDRMAKLQGKEIN---EAKKIIATEITTMVHGREEA-EKAATAAMECF------------ 327
           + ++ +          E K  +   +T +  G +EA  K     ++ F            
Sbjct: 341 LAKIGEEYSSGRMLSGEIKAKLIDVLTPICVGHQEARAKVTDELIDEFMSTRPRVYASLF 400

Query: 328 -DMSIHSQHMPTISISKDE--VSRGMGLLTLIVKAGFAT----------STNEARRHL 372
            DM   +  +   +I+  +  V+ G   + +  K G             S N+ ++ +
Sbjct: 401 GDMGDVAGALDEATIANAKPGVAIGAPAIEIKQKKGLLKAQTGEDGGAISKNQLKKMM 458


>gi|301308375|ref|ZP_07214329.1| ribosomal large subunit pseudouridine synthase B [Bacteroides sp.
           20_3]
 gi|300833845|gb|EFK64461.1| ribosomal large subunit pseudouridine synthase B [Bacteroides sp.
           20_3]
          Length = 495

 Score = 46.7 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 25/52 (48%), Gaps = 1/52 (1%)

Query: 344 DEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
            + +  + L   +  AG   S  EA   ++  A+K+N+ +++    +I  QD
Sbjct: 254 ADPNEPIRLNKFLSNAGVC-SRREADEFIQKGAVKVNDVVVTELGTKITRQD 304


>gi|298374690|ref|ZP_06984648.1| ribosomal large subunit pseudouridine synthase B [Bacteroides sp.
           3_1_19]
 gi|298269058|gb|EFI10713.1| ribosomal large subunit pseudouridine synthase B [Bacteroides sp.
           3_1_19]
          Length = 495

 Score = 46.7 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 25/52 (48%), Gaps = 1/52 (1%)

Query: 344 DEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
            + +  + L   +  AG   S  EA   ++  A+K+N+ +++    +I  QD
Sbjct: 254 ADPNEPIRLNKFLSNAGVC-SRREADEFIQKGAVKVNDVVVTELGTKITRQD 304


>gi|255012441|ref|ZP_05284567.1| ribosomal large subunit pseudouridine synthase B [Bacteroides sp.
           2_1_7]
          Length = 495

 Score = 46.7 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 25/52 (48%), Gaps = 1/52 (1%)

Query: 344 DEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
            + +  + L   +  AG   S  EA   ++  A+K+N+ +++    +I  QD
Sbjct: 254 ADPNEPIRLNKFLSNAGVC-SRREADEFIQKGAVKVNDVVVTELGTKITRQD 304


>gi|150010293|ref|YP_001305036.1| ribosomal large subunit pseudouridine synthase B [Parabacteroides
           distasonis ATCC 8503]
 gi|256839144|ref|ZP_05544654.1| ribosomal large subunit pseudouridine synthase B [Parabacteroides
           sp. D13]
 gi|149938717|gb|ABR45414.1| ribosomal large subunit pseudouridine synthase B [Parabacteroides
           distasonis ATCC 8503]
 gi|256740063|gb|EEU53387.1| ribosomal large subunit pseudouridine synthase B [Parabacteroides
           sp. D13]
          Length = 495

 Score = 46.7 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 25/52 (48%), Gaps = 1/52 (1%)

Query: 344 DEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
            + +  + L   +  AG   S  EA   ++  A+K+N+ +++    +I  QD
Sbjct: 254 ADPNEPIRLNKFLSNAGVC-SRREADEFIQKGAVKVNDVVVTELGTKITRQD 304


>gi|133930543|gb|ABO43842.1| tryptophanyl-tRNA synthetase [Lactobacillus reuteri]
          Length = 340

 Score = 46.7 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 37/225 (16%), Positives = 72/225 (32%), Gaps = 33/225 (14%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH  H    +     LQ TG +    ++G   ++  +    ++ RR +    +  
Sbjct: 14  PTGK-LHIAHYVGSLKNRVELQNTGKYDTFIMIGDQQALTDNARDPEKIRRSLHEVALDY 72

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIG-SFFSVNRMLSFESVR 160
               I             K+  L+ +    L  +  +  L  +  +    N  +  E  +
Sbjct: 73  LAVGI----------DPKKSTILVQSQIPALSELT-MHYLNLVTVARLRRNPTVKTEIKQ 121

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP- 219
            +        F  F Y + QA D      +    + +G  DQ   +    ++        
Sbjct: 122 KKFGESVPAGF--FTYPVSQAADITAFKAD---TVPVG-DDQEPMLEQTREIVRTFNRIY 175

Query: 220 KLFALTSP----------LLTTASGT-KMGKTLSGAIWLNKEMTS 253
           +   L  P           +    G  KM K+L  AI+L+ +  +
Sbjct: 176 QQDILVEPEGVFPPKGQGRIPGLDGNAKMSKSLGNAIYLSDDADT 220


>gi|94309385|ref|YP_582595.1| tryptophanyl-tRNA synthetase II [Cupriavidus metallidurans CH34]
 gi|93353237|gb|ABF07326.1| Tryptophanyl-tRNA synthetase [Cupriavidus metallidurans CH34]
          Length = 342

 Score = 46.7 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 42/229 (18%), Positives = 67/229 (29%), Gaps = 29/229 (12%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
            T   LH GH    +      +  HK   L+    ++  +    D+ RR      + E  
Sbjct: 19  PTGP-LHLGHFVGSLKSRVTLQETHKQYVLLADTQAMTDNAHDPDKVRR-----NVLEVA 72

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR- 162
                +          KT   + ++   L  +  +  L  +            E +++R 
Sbjct: 73  LDYLAVG-----IDPAKTTISVQSHLPALAELTLM-YLNFVTVSRLERNPTIKEEIQARG 126

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT---- 218
             R+    FL   Y   QA D       +   L   G DQ   I    ++  R+      
Sbjct: 127 FGRDIPAGFL--CYPASQAADI----TGFKAVLVPVGEDQAPLIEQTNEIVRRVNNQVGR 180

Query: 219 ---PKLFALTSP--LLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYW 261
              P+  AL      L    G  KM K+   AI L              
Sbjct: 181 EVLPEAAALIPKHGRLPGVDGKAKMSKSQGNAIPLGASPDQIREAVHKM 229


>gi|254555533|ref|YP_003061950.1| tryptophanyl-tRNA synthetase II [Lactobacillus plantarum JDM1]
 gi|254044460|gb|ACT61253.1| tryptophanyl-tRNA synthetase II [Lactobacillus plantarum JDM1]
          Length = 338

 Score = 46.7 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 37/243 (15%), Positives = 77/243 (31%), Gaps = 41/243 (16%)

Query: 44  LTASSLHAGHLTQ-LMLLFWLQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    L     LQ +G +    ++    ++  +    ++ R+ +    +  
Sbjct: 12  PTGK-LHIGHYVGSLRNRVALQDSGDYDSYIMIADNQALTDNAHDPEKIRKSLLQVAMDY 70

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
               I    S+ +          M+N       +  + + R +    +V   +  ++   
Sbjct: 71  LAVGIDPQKSTILVQSQIPALTDMMNQY-----LNLVTVAR-LNRNPTVKTEIKQKAF-- 122

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKL 221
                +S+    F Y + QA D           + +G  DQ   +    ++         
Sbjct: 123 ----GESVPAGFFVYPVSQAADITAFKA---TTVPVG-DDQEPMLEQTREIVRSFNKTYQ 174

Query: 222 FALTSPL--------------LTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNI-D 265
              T  L              +    G  KM K+L  AI+L+ +  +     +   ++  
Sbjct: 175 ---TDTLVEPEGYFPPKGLGRIPGLDGNAKMSKSLGNAIYLSDDADT---LKKKVMSMYT 228

Query: 266 DAD 268
           D D
Sbjct: 229 DPD 231


>gi|270308509|ref|YP_003330567.1| tryptophanyl-tRNA synthetase [Dehalococcoides sp. VS]
 gi|270154401|gb|ACZ62239.1| tryptophanyl-tRNA synthetase [Dehalococcoides sp. VS]
          Length = 323

 Score = 46.7 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 42/294 (14%), Positives = 90/294 (30%), Gaps = 45/294 (15%)

Query: 37  TAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRS 96
             + G   T   LH G+    +  +   +  ++ I  +    +             +   
Sbjct: 3   RVFSGVRPTGR-LHLGNYLGAVKNYVALQDDYECIYCVVDIHA-------------LTTL 48

Query: 97  QEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSF 156
           +E     E I  +    +  G      ++          +  +L    G    ++ +L  
Sbjct: 49  EETDALKENIYEMMLDLLASGLDPKKCILFVQSQ---VPEINELFTLFGMITPLSWLLRV 105

Query: 157 ESVRS--RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
            + +   R+    ++++    Y +LQA D       Y   L   G DQ  ++    ++  
Sbjct: 106 PTFKEKVRMH-PDNVNYGLVGYPVLQAADI----SLYKADLVPVGVDQLPHLELTREIVR 160

Query: 215 RLKTP--------KLFALTSPLLTTASGT-KMGKTLSGAI--WLNKEM---------TSP 254
           R            +      P +    G  KM K+L+  I   L++E          T P
Sbjct: 161 RFNEKFGDTFPEAQARLTNFPTVVGLDGKDKMSKSLNNHIELALSEEETAKKVMSAVTDP 220

Query: 255 YNFWQYWRNIDD-ADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
              ++      D  +V       +   ++ I    +       + K+ +A  I 
Sbjct: 221 ARQFKTDPGHPDICNVYKLHNYFSPQEVTRIADDCQNARIGCVQCKRALAEAIN 274


>gi|28377337|ref|NP_784229.1| tryptophanyl-tRNA synthetase II [Lactobacillus plantarum WCFS1]
 gi|28270169|emb|CAD63068.1| tryptophan--tRNA ligase [Lactobacillus plantarum WCFS1]
          Length = 338

 Score = 46.7 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 37/243 (15%), Positives = 77/243 (31%), Gaps = 41/243 (16%)

Query: 44  LTASSLHAGHLTQ-LMLLFWLQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    L     LQ +G +    ++    ++  +    ++ R+ +    +  
Sbjct: 12  PTGK-LHIGHYVGSLRNRVALQDSGDYDSYIMIADNQALTDNAHDPEKIRKSLLQVAMDY 70

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
               I    S+ +          M+N       +  + + R +    +V   +  ++   
Sbjct: 71  LAVGIDPQKSTILVQSQIPALTDMMNQY-----LNLVTVAR-LNRNPTVKTEIKQKAF-- 122

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKL 221
                +S+    F Y + QA D           + +G  DQ   +    ++         
Sbjct: 123 ----GESVPAGFFVYPVSQAADITAFKA---TTVPVG-DDQEPMLEQTREIVRSFNKTYQ 174

Query: 222 FALTSPL--------------LTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNI-D 265
              T  L              +    G  KM K+L  AI+L+ +  +     +   ++  
Sbjct: 175 ---TDTLVEPEGYFPPKGLGRIPGLDGNAKMSKSLGNAIYLSDDADT---LKKKVMSMYT 228

Query: 266 DAD 268
           D D
Sbjct: 229 DPD 231


>gi|325185091|emb|CCA19583.1| tryptophanyltRNA synthetase putative [Albugo laibachii Nc14]
          Length = 528

 Score = 46.7 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 26/101 (25%), Positives = 37/101 (36%), Gaps = 1/101 (0%)

Query: 15  RGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RGF     +  EL     +G     Y G   ++ SLH GHL       WLQK    P+ +
Sbjct: 197 RGFFFAHRDLNELLDAYEKGESFYLYTGRGPSSGSLHMGHLIPFTFNAWLQKVFQVPLVI 256

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFI 114
                          E  R M  + +++ I     I  +FI
Sbjct: 257 QLTDDEKFLFRDQTLEESRRMMLENVKDIITCGFDIKKTFI 297


>gi|308179550|ref|YP_003923678.1| tryptophanyl-tRNA synthetase II [Lactobacillus plantarum subsp.
           plantarum ST-III]
 gi|308045041|gb|ADN97584.1| tryptophanyl-tRNA synthetase II [Lactobacillus plantarum subsp.
           plantarum ST-III]
          Length = 338

 Score = 46.7 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 37/243 (15%), Positives = 77/243 (31%), Gaps = 41/243 (16%)

Query: 44  LTASSLHAGHLTQ-LMLLFWLQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    L     LQ +G +    ++    ++  +    ++ R+ +    +  
Sbjct: 12  PTGK-LHIGHYVGSLRNRVALQDSGDYDSYIMIADNQALTDNAHDPEKIRKSLLQVAMDY 70

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
               I    S+ +          M+N       +  + + R +    +V   +  ++   
Sbjct: 71  LAVGIDPQKSTILVQSQIPALTDMMNQY-----LNLVTVAR-LNRNPTVKTEIKQKAF-- 122

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKL 221
                +S+    F Y + QA D           + +G  DQ   +    ++         
Sbjct: 123 ----GESVPAGFFVYPVSQAADITAFKA---TTVPVG-DDQEPMLEQTREIVRSFNKTYQ 174

Query: 222 FALTSPL--------------LTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNI-D 265
              T  L              +    G  KM K+L  AI+L+ +  +     +   ++  
Sbjct: 175 ---TDTLVEPEGYFPPKGLGRIPGLDGNAKMSKSLGNAIYLSDDADT---LKKKVMSMYT 228

Query: 266 DAD 268
           D D
Sbjct: 229 DPD 231


>gi|300767077|ref|ZP_07076990.1| tryptophanyl-tRNA synthetase II [Lactobacillus plantarum subsp.
           plantarum ATCC 14917]
 gi|300495615|gb|EFK30770.1| tryptophanyl-tRNA synthetase II [Lactobacillus plantarum subsp.
           plantarum ATCC 14917]
          Length = 341

 Score = 46.7 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 37/243 (15%), Positives = 77/243 (31%), Gaps = 41/243 (16%)

Query: 44  LTASSLHAGHLTQ-LMLLFWLQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    L     LQ +G +    ++    ++  +    ++ R+ +    +  
Sbjct: 15  PTGK-LHIGHYVGSLRNRVALQDSGDYDSYIMIADNQALTDNAHDPEKIRKSLLQVAMDY 73

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
               I    S+ +          M+N       +  + + R +    +V   +  ++   
Sbjct: 74  LAVGIDPQKSTILVQSQIPALTDMMNQY-----LNLVTVAR-LNRNPTVKTEIKQKAF-- 125

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKL 221
                +S+    F Y + QA D           + +G  DQ   +    ++         
Sbjct: 126 ----GESVPAGFFVYPVSQAADITAFKA---TTVPVG-DDQEPMLEQTREIVRSFNKTYQ 177

Query: 222 FALTSPL--------------LTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNI-D 265
              T  L              +    G  KM K+L  AI+L+ +  +     +   ++  
Sbjct: 178 ---TDTLVEPEGYFPPKGLGRIPGLDGNAKMSKSLGNAIYLSDDADT---LKKKVMSMYT 231

Query: 266 DAD 268
           D D
Sbjct: 232 DPD 234


>gi|195590821|ref|XP_002085143.1| GD12469 [Drosophila simulans]
 gi|194197152|gb|EDX10728.1| GD12469 [Drosophila simulans]
          Length = 525

 Score = 46.7 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 54/314 (17%), Positives = 93/314 (29%), Gaps = 32/314 (10%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R    +     +L  + S+  +  Y G   T    H  +   +  +    K G +  
Sbjct: 12  LITRNL-QETLGDDKLTKILSERDLKIYWGTATTGKP-HVAYFVPMSKIADFLKAGCEVT 69

Query: 72  SLMGGGTSII---GDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
            L     + +     P    E R     Q I+  +  I       +K+  G         
Sbjct: 70  ILFADLHAYLDNMKAPWSLLELRTQYYEQVIKAMLSSIGVPLDK-LKFVKGSDYQ----- 123

Query: 129 ETWLCSIKYIDLLREIGSFFSV-NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
              L     +D+ +          +    E V+   + E  L      Y  LQA D   L
Sbjct: 124 ---LSKEYTLDVYKLSSVVTQHDAKKAGAEVVK---QVEYPL-LSGLLYPGLQALDEEYL 176

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
                   Q GG DQ            +L   K     +P++   +G KM  +   +   
Sbjct: 177 K----VDAQFGGVDQRKIFTFSEKYLPQLGYEKRIHFMNPMVPGLAGGKMSSSEEDS--K 230

Query: 248 NKEMTSPYNFWQYWR-------NIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
              + SP N  +  +       NI D  ++SF K +      E +     +  E      
Sbjct: 231 IDLLDSPANVKKKLKKAFCEPGNIADNGLLSFVKHVLFSLFKEGEGFEVNREAEHGGDVT 290

Query: 301 IIATEITTMVHGRE 314
            +  E     +  +
Sbjct: 291 FLKYEDLEKYYAED 304


>gi|183220527|ref|YP_001838523.1| tryptophanyl-tRNA synthetase [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Paris)']
 gi|189910636|ref|YP_001962191.1| tryptophanyl-tRNA synthetase [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Ames)']
 gi|167775312|gb|ABZ93613.1| Tryptophan--tRNA ligase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167778949|gb|ABZ97247.1| Tryptophanyl-tRNA synthetase (Tryptophan--tRNA ligase; TrpRS)
           [Leptospira biflexa serovar Patoc strain 'Patoc 1
           (Paris)']
          Length = 322

 Score = 46.7 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 27/126 (21%), Positives = 40/126 (31%), Gaps = 23/126 (18%)

Query: 156 FESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER 215
            + V         L    F Y IL A D + L       +   G DQ  ++    D+ ER
Sbjct: 108 KDKVAKGFVPGAGL----FTYPILMASDIL-LFSAEKVPV---GKDQKQHLEFARDIAER 159

Query: 216 LKTPKLFALTSP---------LLTTASGTKMGKTLSGAI-WLNKEMTSPYNFWQYWRNI- 264
             T     LT P          +    G KM K+    I +   E        +   +I 
Sbjct: 160 FNTQFGSVLTIPEPDIDENTATVPGVDGAKMSKSYQNTIDFFGTEK----EIKKKVMSIV 215

Query: 265 DDADVV 270
            D+  +
Sbjct: 216 SDSKAI 221


>gi|153007893|ref|YP_001369108.1| hemolysin A [Ochrobactrum anthropi ATCC 49188]
 gi|151559781|gb|ABS13279.1| hemolysin A [Ochrobactrum anthropi ATCC 49188]
          Length = 253

 Score = 46.7 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 8/51 (15%), Positives = 24/51 (47%)

Query: 341 ISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
           +S +   + + L  L+V+ G   + + AR  ++   +K++   ++     +
Sbjct: 1   MSGETSDKNLRLDQLLVELGLFATRSRARDAIQRGTVKVDGKPVTKPGQTV 51


>gi|148655597|ref|YP_001275802.1| tryptophanyl-tRNA synthetase [Roseiflexus sp. RS-1]
 gi|148567707|gb|ABQ89852.1| tryptophanyl-tRNA synthetase [Roseiflexus sp. RS-1]
          Length = 335

 Score = 46.7 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 46/238 (19%), Positives = 81/238 (34%), Gaps = 31/238 (13%)

Query: 31  CSQGVVTAYIGYDLTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSIIGDPSFRDE 89
            +Q       G   T   +H GH    +     LQ   ++   L+     +    + R E
Sbjct: 1   MNQPKKRILTGDRPTGR-MHLGHYVGTLANRVRLQDE-YECFFLVADLHML----TTRTE 54

Query: 90  SRRM-MRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYI-DLLREIGSF 147
             R+    + I+  +       S  I     K+   + +    +  I  I  +L  +   
Sbjct: 55  LERLRQTGENIRHVV---LDNLSVGID--PEKSTYFLQSMVPAISEIALIFGMLTTVPRL 109

Query: 148 FSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNII 207
             V  +   + V   L  EQ  S+    Y +L A D + +  +    L   G DQ  ++ 
Sbjct: 110 QRVPTL---KEVMQDLHIEQP-SYGLLGYPVLMAADILCVRAD----LVPVGKDQASHLE 161

Query: 208 CGIDLGERLKT--------PKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYN 256
              ++  R  T        P+      P L    G  KM K+L  AI+L+ +  +   
Sbjct: 162 VTREIARRFNTLYGEVLPEPETLIGDVPTLVGIDGQAKMSKSLDNAIYLSDDARTVEE 219


>gi|94265729|ref|ZP_01289466.1| Tryptophanyl-tRNA synthetase, class Ib [delta proteobacterium
           MLMS-1]
 gi|93453742|gb|EAT04118.1| Tryptophanyl-tRNA synthetase, class Ib [delta proteobacterium
           MLMS-1]
          Length = 322

 Score = 46.7 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 34/232 (14%), Positives = 68/232 (29%), Gaps = 40/232 (17%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   +   LH G+   +M         H   + +    +             +    + +
Sbjct: 6   GIQPSGQ-LHIGNYFGMMKPMIANMAEHDLYAFIVDLHA-------------LTSVHDAK 51

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWL-CSIKYIDLLREIGSFFSVNRMLSF-ES 158
             +       + F+  G             W+   +  +  L  + S  +   +L    S
Sbjct: 52  RLVGGTLEAAADFLALGLDPRRCTF-----WVQSDVPEVTELTWVLSCVTPMGLLERCHS 106

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
            + +  R  + S   F Y +L A D + L +     +   G DQ  ++    D+  +   
Sbjct: 107 YKDKTARGLAASHGLFAYPVLMAADIL-LYQGQRVPV---GKDQQQHLEVARDIALKFN- 161

Query: 219 PKLFALTSPL-----------LTTASGTKMGKTLSGA--IWLNKEMTSPYNF 257
              F  T  L           +    G KM K+      I+L+ +       
Sbjct: 162 -HTFGDTFVLPEAAIEDNLATIPGLDGQKMSKSYDNTIPIFLDAKALKKRVM 212


>gi|294948890|ref|XP_002785946.1| IFP53, putative [Perkinsus marinus ATCC 50983]
 gi|239900054|gb|EER17742.1| IFP53, putative [Perkinsus marinus ATCC 50983]
          Length = 452

 Score = 46.7 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 53/334 (15%), Positives = 98/334 (29%), Gaps = 49/334 (14%)

Query: 15  RGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +   L     +G     Y G   ++ SLH GHL       WLQ T   P+ +
Sbjct: 104 RGLFFSHRDLGILLDKYERGIPFYLYTGRGPSSESLHLGHLVPFQFTKWLQDTFDVPLVI 163

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                 +  D  F  +    +  +E               I  G       + ++  ++ 
Sbjct: 164 -----QLTDDEKFFFKD--YLSLEEAHRLA---YENAKDIIACGFDMDKTFIFSDLDYMG 213

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA----- 188
           ++     + +I    + N+  +  +         S++   F   I  +  F         
Sbjct: 214 TMYPN--VCKIQKLVTYNQ--ARGAFG--FTGSDSVAKSSFC-AIQASPSFSTTFPSIFG 266

Query: 189 --KNYDCRLQMGGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTASGTKMGKTLSG 243
             K+  C +     DQ        D+  R+   K   + +   P L     TKM  ++  
Sbjct: 267 DRKDIMCLIPQ-AIDQDPYFRVTRDVAPRMGMLKPALIHSKFFPALQGHK-TKMSGSVGN 324

Query: 244 -AIWLN------KEMTSPYNFWQ----------YWRNIDDADVVSFAKRL--TTLPMSEI 284
             I +       K     Y F            Y  N++      + + +        +I
Sbjct: 325 TTIMVTDKPKEIKNKIMKYCFSGGQDSAEEQRKYGANLEVDVAYEYLRYIMEDDEKFEQI 384

Query: 285 DRMAKLQGKEINEAKKIIATEITTMVHGREEAEK 318
                       E K I+  E+  +    +EA  
Sbjct: 385 GEEYSSGKLLTGEVKNILVEELVKLTKTHQEARA 418


>gi|269123187|ref|YP_003305764.1| tryptophanyl-tRNA synthetase [Streptobacillus moniliformis DSM
           12112]
 gi|268314513|gb|ACZ00887.1| tryptophanyl-tRNA synthetase [Streptobacillus moniliformis DSM
           12112]
          Length = 324

 Score = 46.7 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 51/311 (16%), Positives = 94/311 (30%), Gaps = 61/311 (19%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGG---TSIIGDPSFRDESRRMMRSQ 97
           G   +   LH G+    +  F   +  ++ I  +      TS I           M+R++
Sbjct: 6   GIQPSGM-LHLGNYFGALKQFVDLQDSYEGIYFVADYHSLTSQINPE--------MLRTK 56

Query: 98  EIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLS-F 156
            +   ++ I             K+   + ++      + +I  L  +     + R  +  
Sbjct: 57  SMNIVMDYIAAGL------DPKKSTIFLQSSIPLHTELMWI--LSNLTPMALLERGHAYK 108

Query: 157 ESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL 216
           + V   +K    L    FNY +L A D +     Y+      G DQ  +I    D   + 
Sbjct: 109 DKVAKGIKANVGL----FNYPVLMAADILL----YEPDFVPVGKDQKQHIEFTRDFAVKF 160

Query: 217 K---TPKLFALTSPLLT-------TASGTKMGKTLSGAIWLNKEMTSPYNFWQY-WRNI- 264
                 ++F L   L+           G KM K+    I     + +P    +    +I 
Sbjct: 161 NEFYGKEVFKLPEALILDNVATVIGTDGEKMSKSYGNTI----NIYAPEKIVKKQVMSIV 216

Query: 265 -----------DDADVVSFAKRLTTLPMSEIDRMAK---LQGKEINEAKKIIATEITTMV 310
                       D ++            +EI  M +           AKK +   I    
Sbjct: 217 TDSAGLEDSKNPDNNITKLYSLFAD--ENEIKAMKEKFIAGNYGYGHAKKELLERILDYF 274

Query: 311 HGREEAEKAAT 321
             + E   A  
Sbjct: 275 KEQREKRFALE 285


>gi|218887424|ref|YP_002436745.1| tryptophanyl-tRNA synthetase [Desulfovibrio vulgaris str. 'Miyazaki
           F']
 gi|218758378|gb|ACL09277.1| tryptophanyl-tRNA synthetase [Desulfovibrio vulgaris str. 'Miyazaki
           F']
          Length = 329

 Score = 46.7 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 35/225 (15%), Positives = 64/225 (28%), Gaps = 37/225 (16%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGG---TSIIGDPSFRDESRRMMRSQ 97
           G   T   LH GH   ++  +   +   +    +      TS   DPS   E    + + 
Sbjct: 11  GMRPTGP-LHLGHYFGVLKNWVEMQHEMEAFFFVADWHALTSDYADPSRIREFVPELVTD 69

Query: 98  EIQENIE---KIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRML 154
            +   ++    +    S   ++        M+   +WL                      
Sbjct: 70  WVAAGLDPEKCVMFQQSHIKEHAELHLILSMITPVSWLERNPT--------------YKE 115

Query: 155 SFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
             + V ++             Y +L A D + +       +   G DQ  ++    ++  
Sbjct: 116 QKQEVVNKDLGNYGF----LGYPVLMASDIL-IYHPKWVPV---GQDQLPHLELTREIAR 167

Query: 215 RLK-------TPKLFALTSPL-LTTASGTKMGKTLSGAIWLNKEM 251
           R               LT         G KM K+   AI+L   M
Sbjct: 168 RFNFLYGDYFPEPEARLTPAAKCPGLDGRKMSKSYGNAIYLRDTM 212


>gi|148272145|ref|YP_001221706.1| tryptophanyl-tRNA synthetase [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
 gi|147830075|emb|CAN01004.1| trpS [Clavibacter michiganensis subsp. michiganensis NCPPB 382]
          Length = 337

 Score = 46.7 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 59/299 (19%), Positives = 106/299 (35%), Gaps = 51/299 (17%)

Query: 41  GYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           G   +A SL  G+    L+    LQ T H  +  +    + I  P      R   R    
Sbjct: 10  GMQPSADSLQIGNYIGALLQWKELQTT-HDAVFCVVDLHA-ITVPQEPAALRASTRRTAA 67

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           Q     I    S+   +      A           + +I  L  +  F   +RM  F+  
Sbjct: 68  QYIAAGIDPAVSTL--FVQSHVSAH--------TQLAWI--LNTLTGFGEASRMTQFKD- 114

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT- 218
           +S+ +   + +   F Y  L A D +     Y   +   G DQ  ++    DL +R  + 
Sbjct: 115 KSQKQGADATTLGLFAYPTLMAADILL----YGTEVVPVGDDQKQHVELTRDLAKRFNSR 170

Query: 219 -PKLFALTSPLLTTASGT---------KMGKTL---SGAIWLNKEMTSPYNFWQYWRN-I 264
              +F +  P++   +           KM K+    +G +WL   +  P    +  R+ +
Sbjct: 171 FGDVFRIPEPMIQKDTARIYDLQDPTSKMSKSSASDAGVVWL---LDEPAKTAKKIRSAV 227

Query: 265 DDAD-VVSFAK--------RLTTLPMSEIDRMAKLQ----GKEINEAKKIIATEITTMV 310
            D +  + F +         LT L   E   +  L+    G+   + KK +A  +T++ 
Sbjct: 228 TDTEREIRFDRGEKPGVSNLLTILSAFEGTAVPALEERYAGRGYGDLKKDVAETVTSVF 286


>gi|218676602|ref|YP_002395421.1| tryptophanyl-tRNA synthetase II [Vibrio splendidus LGP32]
 gi|218324870|emb|CAV26621.1| Tryptophanyl-tRNA synthetase [Vibrio splendidus LGP32]
          Length = 353

 Score = 46.7 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 37/217 (17%), Positives = 61/217 (28%), Gaps = 31/217 (14%)

Query: 45  TASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIE 104
           T   LH GH    +      +  H    L+     +  +            S  I   + 
Sbjct: 33  TGP-LHLGHYVGSLKQRVSLQHIHDQTILVADMQGLTDNAH-----NPSKVSSNILNVVA 86

Query: 105 KIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSV--NRMLSFESVRSR 162
               +          KT   + +    L  +        + S   +  N  +  E     
Sbjct: 87  DYLAVG-----IDPTKTTICLQSQLPVLAELTM--FYSNLVSIARLERNPTVKSEIQNKE 139

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK---TP 219
             R     FL   Y I QA D       ++  L   G DQ   +    ++  ++      
Sbjct: 140 FGRSIPAGFL--TYPISQAADITA----FNATLVPVGDDQLPMLEQTNEIVRKVNSLAGK 193

Query: 220 KLFALTSPLLTT------ASGT-KMGKTLSGAIWLNK 249
            +     PLL+         G  KM K++  AI L  
Sbjct: 194 PILNECRPLLSNASRLPSTDGKSKMSKSMGNAINLGA 230


>gi|170783172|ref|YP_001711506.1| tryptophanyl-tRNA synthetase [Clavibacter michiganensis subsp.
           sepedonicus]
 gi|169157742|emb|CAQ02944.1| tryptophanyl-tRNA synthetase [Clavibacter michiganensis subsp.
           sepedonicus]
          Length = 337

 Score = 46.7 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 60/302 (19%), Positives = 105/302 (34%), Gaps = 57/302 (18%)

Query: 41  GYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSII--GDP-SFRDESRRMMRS 96
           G   +A SL  G+    L+    LQ T H  +  +    +I    DP + RD +RR   +
Sbjct: 10  GMQPSADSLQIGNYIGALLQWKELQTT-HDAVFCVVDLHAITVPQDPGALRDSTRRT-AA 67

Query: 97  QEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSF 156
           Q I   I+                  A +LN  T       +   ++             
Sbjct: 68  QYIAAGIDPAVSTLFVQSHVSAHTELAWILNTLTGFGEASRMTQFKD------------- 114

Query: 157 ESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL 216
              +S+ +   + +   F Y  L A D +     Y   +   G DQ  ++    DL +R 
Sbjct: 115 ---KSQKQGADATTLGLFAYPTLMAADILL----YGTEVVPVGDDQKQHVELTRDLAKRF 167

Query: 217 KT--PKLFALTSPLLTTASGT---------KMGKTL---SGAIWLNKEMTSPYNFWQYWR 262
            +    +F +  P++   +           KM K+    +G +WL   +  P    +  R
Sbjct: 168 NSRFGDVFRIPEPMIQKDTARIYDLQDPTSKMSKSAASDAGVVWL---LDEPAKTAKKIR 224

Query: 263 N-IDDA-DVVSFAK--------RLTTLPMSEIDRMAKLQ----GKEINEAKKIIATEITT 308
           + + D    V F +         LT L   E   +  L+    G+   + KK +A  +T 
Sbjct: 225 SAVTDTGREVRFDRGEKPGVSNLLTILSAFEGTAVPALEERYAGRGYGDLKKDVAETVTG 284

Query: 309 MV 310
           + 
Sbjct: 285 VF 286


>gi|94270214|ref|ZP_01291679.1| Tryptophanyl-tRNA synthetase, class Ib [delta proteobacterium
           MLMS-1]
 gi|93450895|gb|EAT01906.1| Tryptophanyl-tRNA synthetase, class Ib [delta proteobacterium
           MLMS-1]
          Length = 322

 Score = 46.7 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 34/232 (14%), Positives = 68/232 (29%), Gaps = 40/232 (17%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   +   LH G+   +M         H   + +    +             +    + +
Sbjct: 6   GIQPSGQ-LHIGNYFGMMKPMIANMAEHDLYAFIVDLHA-------------LTSVHDAK 51

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWL-CSIKYIDLLREIGSFFSVNRMLSF-ES 158
             +       + F+  G             W+   +  +  L  + S  +   +L    S
Sbjct: 52  RLVGGTLEAAADFLALGLDPRRCTF-----WVQSDVPEVTELTWVLSCVTPMGLLERCHS 106

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
            + +  R  + S   F Y +L A D + L +     +   G DQ  ++    D+  +   
Sbjct: 107 YKDKTARGLAASHGLFAYPVLMAADIL-LYQGQRVPV---GKDQQQHLEVARDIALKFN- 161

Query: 219 PKLFALTSPL-----------LTTASGTKMGKTLSGA--IWLNKEMTSPYNF 257
              F  T  L           +    G KM K+      I+L+ +       
Sbjct: 162 -HTFGDTFVLPEAAIEDNLATIPGLDGQKMSKSYDNTIPIFLDAKALKKRVM 212


>gi|213963254|ref|ZP_03391511.1| tryptophanyl-tRNA synthetase [Capnocytophaga sputigena Capno]
 gi|213954116|gb|EEB65441.1| tryptophanyl-tRNA synthetase [Capnocytophaga sputigena Capno]
          Length = 322

 Score = 46.7 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 30/166 (18%), Positives = 54/166 (32%), Gaps = 25/166 (15%)

Query: 144 IGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQW 203
           +  FF   R+    S + ++   Q ++   F Y +L A D +     YD  +   G DQ 
Sbjct: 95  LACFFPYQRLTLAHSFKDKMDYLQDVNAGLFTYPMLMAADILL----YDAEVVPVGKDQL 150

Query: 204 GNIICGIDLGERLKTPKLFALTSP---------LLTTASGTKMGKTLSG--AIWLNKEMT 252
            ++    D+  R           P         ++    G KM K+ +    I+L ++  
Sbjct: 151 QHLEITRDVASRFNHQMGETFVLPQAKIEEKIMIIPGTDGEKMSKSRNNFINIFLPEKQL 210

Query: 253 SPYNFWQYWRNID-----DAD---VVSFAKRLTTLPMSEIDRMAKL 290
                     +       D D   V+   + L      +I  M   
Sbjct: 211 RKQIMAIQTDSTPLEAPKDPDTCNVMRLYRLLA--SPEQIQTMEAA 254


>gi|189501858|ref|YP_001957575.1| hypothetical protein Aasi_0430 [Candidatus Amoebophilus asiaticus
           5a2]
 gi|189497299|gb|ACE05846.1| hypothetical protein Aasi_0430 [Candidatus Amoebophilus asiaticus
           5a2]
          Length = 252

 Score = 46.7 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 25/62 (40%), Gaps = 1/62 (1%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
             I  AG   S  EA   +++  I +N   I+    Q+K  D     +  L   K  +I+
Sbjct: 23  KWISNAGIC-SRREADELIQAGRITVNGEKITTLGYQVKNTDIVKFRDKVLKPNKHVYIL 81

Query: 414 CH 415
            +
Sbjct: 82  LN 83


>gi|324507967|gb|ADY43370.1| Tryptophanyl-tRNA synthetase [Ascaris suum]
          Length = 422

 Score = 46.7 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 24/129 (18%), Positives = 46/129 (35%), Gaps = 12/129 (9%)

Query: 15  RGFIHQISN-PRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +  R LD +  +     Y G   ++ SLH GHL   +   +LQ     P+ +
Sbjct: 88  RGLFFAHRDFSRILDRVEQKKPFFLYTGRGPSSGSLHLGHLVPFLFTKFLQDAFDVPLII 147

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                         D+ + + ++  + E  +         I  G       M  N  ++C
Sbjct: 148 -----------QITDDEKFLWKNMTLDEARKMAHENMKDIIACGFSPETTFMFTNTQYMC 196

Query: 134 SIKYIDLLR 142
              + ++L+
Sbjct: 197 PPFFENVLK 205


>gi|312869186|ref|ZP_07729359.1| tryptophan--tRNA ligase [Lactobacillus oris PB013-T2-3]
 gi|311095296|gb|EFQ53567.1| tryptophan--tRNA ligase [Lactobacillus oris PB013-T2-3]
          Length = 340

 Score = 46.7 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 37/222 (16%), Positives = 70/222 (31%), Gaps = 33/222 (14%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     LQ TG +    ++    ++  +    ++ RR +    +  
Sbjct: 14  PTGK-LHIGHYVGSLKNRVALQNTGKYDTYIMIADQQALTDNARDPEKIRRSLHEVALDY 72

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIG-SFFSVNRMLSFESVR 160
               I             K+   + +    L  +  +  L  +  S    N  +  E  +
Sbjct: 73  LAVGIDPQ----------KSTIFVQSQIPALSELT-MHYLNLVTVSRLKRNPTVKTEIQQ 121

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP- 219
            +        FL   Y + QA D      +    + +G  DQ   +    ++        
Sbjct: 122 KKFGESVPAGFL--IYPVSQAADITAFKAD---TVPVG-DDQEPMLEQTREIVRTFNRIY 175

Query: 220 KLFALTSP----------LLTTASGT-KMGKTLSGAIWLNKE 250
           +   L  P           +    G  KM K+L  AI+L+ +
Sbjct: 176 QQDILVEPEGVFPPKGEGRIPGLDGNAKMSKSLGNAIYLSDD 217


>gi|227541838|ref|ZP_03971887.1| tryptophanyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC
           51866]
 gi|227182281|gb|EEI63253.1| tryptophanyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC
           51866]
          Length = 337

 Score = 46.7 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 37/238 (15%), Positives = 71/238 (29%), Gaps = 35/238 (14%)

Query: 31  CSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDES 90
            +        G   TA S H G+    +  +   +   +    +    +I  D       
Sbjct: 1   MTDKKTRVLSGIQPTADSYHLGNYLGALKQWITLQDEFEAFYFIPNLHAITVD------- 53

Query: 91  RRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSV 150
                 +E++           +       K+   + ++      + +  ++  +  F   
Sbjct: 54  ---QDPEELRNRTYAGAAQLLALG-IDPEKSTLFVQSHVHEHAELAW--VMTCLTGFGEA 107

Query: 151 NRMLS-FESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICG 209
           +RM    +  + R     S     F Y +L A D + L K     +   G DQ  ++   
Sbjct: 108 SRMTQFKDKSKKRGADRTSAGL--FTYPMLMAADIL-LYKPKYVPV---GEDQRQHLELS 161

Query: 210 IDLGERLKTPKLFALTSPLLTT--ASGT-----------KMGKTLSGAIWLNKEMTSP 254
             L +R      F  T PL      +G            KM K+ S    +   +  P
Sbjct: 162 RTLADRFNKR--FGDTFPLPEGFIPTGAAKIYDLQDPTSKMSKSGSNPKGIINLLDDP 217


>gi|86740572|ref|YP_480972.1| tryptophanyl-tRNA synthetase [Frankia sp. CcI3]
 gi|86567434|gb|ABD11243.1| tryptophanyl-tRNA synthetase [Frankia sp. CcI3]
          Length = 370

 Score = 46.7 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 40/246 (16%), Positives = 76/246 (30%), Gaps = 41/246 (16%)

Query: 26  ELDILCSQGVVTAYI--GYDLTASSLHAGHLTQ-LMLLFWLQKTGHKPISLMGGGTSIIG 82
           EL+ L         +  G   T   LH GH    L     LQ  G +   ++        
Sbjct: 33  ELEELILSNPERFRVLTGDRPTGR-LHLGHYFGTLHNRVRLQDLGTEIFLIIADY----- 86

Query: 83  DPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG----TGKTDALMLNNETWLCSIKYI 138
                    +++  +++ +N+          + Y           +  ++     +   +
Sbjct: 87  ---------QVLTDRDVADNLTAHVEEL--VLDYLAIGIDPARSTIFTHSAVPALNQLML 135

Query: 139 DLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMG 198
             L  +            E +     R+ ++S L + Y + QA D +    N    L   
Sbjct: 136 PFLSLVSVAELNRNPTVKEEIA--HSRQSAVSGLMYTYPVHQAADILFCKGN----LVPV 189

Query: 199 GSDQWGNIICGIDLGERLKT-----------PKLFALTSPLLTTASGTKMGKTLSGAIWL 247
           G DQ  ++     +  R              P+    ++PLL    G+KM K+   A+ L
Sbjct: 190 GQDQLPHLELARTIARRFNDRYGDGTRLFPEPEALLSSAPLLLGTDGSKMSKSRRNAVAL 249

Query: 248 NKEMTS 253
                 
Sbjct: 250 AATADE 255


>gi|297192557|ref|ZP_06909955.1| tryptophanyl-tRNA synthetase 1 [Streptomyces pristinaespiralis ATCC
           25486]
 gi|197718098|gb|EDY62006.1| tryptophanyl-tRNA synthetase 1 [Streptomyces pristinaespiralis ATCC
           25486]
          Length = 337

 Score = 46.7 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 50/295 (16%), Positives = 93/295 (31%), Gaps = 43/295 (14%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   TA S H G+    +  +   +  H    ++    + I  P    E R         
Sbjct: 11  GIQPTAGSFHLGNYLGAIRQYVALQETHDAFYMVVDLHA-ITVPQDPAELR--------- 60

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
               ++             +    + ++      + +  ++  +  F   +RM  F+   
Sbjct: 61  -ANTRLAAAQLLAAGLDPERCTLFVQSHVPEHAQLGW--VMNCLTGFGEASRMTQFKDKS 117

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
           +R   +++   L F Y ILQ  D + L +     +   G DQ  ++    DL ER     
Sbjct: 118 ARHGADRATVGL-FTYPILQVADIL-LYQADAVPV---GEDQRQHVELTRDLAERFNGRF 172

Query: 221 LFALTSPLLTTASGT-----------KMGKTLSGAIWLNKEMTSPYNFWQYWRN-IDDAD 268
               T P                   KM K+ S    L   +  P    +  ++ + D D
Sbjct: 173 GRTFTVPAPYIVKEVAKIYDLQDPTIKMSKSASTPKGLINLLDEPKTTAKKVKSAVTDTD 232

Query: 269 ------------VVSFAKRLTTLPMSEIDRMAKL-QGKEINEAKKIIATEITTMV 310
                       V +     +TL  + I  + +  +GK     K  +A  +   V
Sbjct: 233 TVIRFDAEEKPGVSNLLTIYSTLTGTAIADLEQKYEGKGYGALKTDLAEVMVDFV 287


>gi|83859466|ref|ZP_00952987.1| RNA pseudouridylate synthase family protein [Oceanicaulis
           alexandrii HTCC2633]
 gi|83852913|gb|EAP90766.1| RNA pseudouridylate synthase family protein [Oceanicaulis
           alexandrii HTCC2633]
          Length = 354

 Score = 46.7 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 13/61 (21%), Positives = 26/61 (42%), Gaps = 2/61 (3%)

Query: 335 HMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
             P+   + +E   G  +  ++  AG A S  EA R ++   + +N  I+     ++   
Sbjct: 3   DTPSTPDTPEE-EGGERIAKVLAHAGIA-SRREAERLIEKGRVSVNGEILRTPAFKVMAG 60

Query: 395 D 395
           D
Sbjct: 61  D 61


>gi|296133141|ref|YP_003640388.1| tryptophanyl-tRNA synthetase [Thermincola sp. JR]
 gi|296031719|gb|ADG82487.1| tryptophanyl-tRNA synthetase [Thermincola potens JR]
          Length = 328

 Score = 46.7 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 40/219 (18%), Positives = 75/219 (34%), Gaps = 40/219 (18%)

Query: 49  LHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKG 108
           LH GHL+ L     LQ   ++   ++    ++  + +   + ++ +R   I      +  
Sbjct: 16  LHIGHLSVLENWVKLQDE-YECFFMVADWHALTSNYADTHDMQQNIRDLVIDWMAAGLDP 74

Query: 109 IFSSFIKYGTGKTDAL------MLNNETWLCS-IKYIDLLREIGSFFSVNRMLSFESVRS 161
             S+       K  A       M+   +WL     Y D + ++G                
Sbjct: 75  SKSTIFVQSHVKEHAELHLLFSMITPLSWLERVPTYKDQIAQLGKQ-------------- 120

Query: 162 RLKREQSLSFLEFN-YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK--- 217
                + L+   F  Y +LQA D + + K     +   G DQ  ++    ++  R     
Sbjct: 121 ----GKDLNTYGFLGYPLLQAADIL-VYKANAVPV---GEDQLPHLEFTREVARRFNFMY 172

Query: 218 ------TPKLFALTSPLLTTASGTKMGKTLSGAIWLNKE 250
                  P+       LL    G KM K+ +  I ++ E
Sbjct: 173 KAEIFPEPQPIIGQVALLPGIDGRKMSKSYNNFINISSE 211


>gi|254585373|ref|XP_002498254.1| ZYRO0G05918p [Zygosaccharomyces rouxii]
 gi|238941148|emb|CAR29321.1| ZYRO0G05918p [Zygosaccharomyces rouxii]
          Length = 479

 Score = 46.7 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 22/108 (20%), Positives = 38/108 (35%), Gaps = 14/108 (12%)

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV- 357
           +K  A + T   HG    EK        F+  + S      S+   +      LL     
Sbjct: 44  QKWTAKQETRAYHGEHLTEK---RWQFFFNPKLDSVAQLDASLKGGKEEETPFLLQTFAV 100

Query: 358 ----------KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
                     +A FA+S  +AR+ +    + +N   I++    +K  D
Sbjct: 101 LEKRLDFAVFRAMFASSVRQARQFILQGNVFVNGIKIAHPNYTLKPGD 148


>gi|295101862|emb|CBK99407.1| Uncharacterized conserved protein [Faecalibacterium prausnitzii
           L2-6]
          Length = 71

 Score = 46.7 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 9/36 (25%), Positives = 19/36 (52%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIIS 385
           + L  L+  AG   +  EA+  ++  A+K+N  + +
Sbjct: 11  IKLDALLKYAGLCETGGEAKELVQGGAVKVNGEVCT 46


>gi|254293362|ref|YP_003059385.1| RNA-binding S4 domain protein [Hirschia baltica ATCC 49814]
 gi|254041893|gb|ACT58688.1| RNA-binding S4 domain protein [Hirschia baltica ATCC 49814]
          Length = 508

 Score = 46.7 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 12/72 (16%), Positives = 29/72 (40%), Gaps = 7/72 (9%)

Query: 338 TISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
             S+   + S+G  +   +  AG   S  EA R ++   + +N  ++ +   ++   +  
Sbjct: 22  EKSVQSPDWSKGERIAKWLAAAGVC-SRREAERLIEEGLVAVNGQVLDSAAFKVTGNEKI 80

Query: 398 STGNIKLSFGKK 409
           +        GK+
Sbjct: 81  TVE------GKR 86


>gi|74211911|dbj|BAE29299.1| unnamed protein product [Mus musculus]
          Length = 475

 Score = 46.7 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 40/248 (16%), Positives = 84/248 (33%), Gaps = 31/248 (12%)

Query: 15  RGFIHQISN-PRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +  + LD   ++     Y G   ++ ++H GHL   +   WLQ   + P+ +
Sbjct: 138 RGIFFSHRDMNQILDAYENKKPFYLYTGRGPSSEAMHLGHLVPFIFTKWLQDVFNVPLVI 197

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                         D+ + + +   +++            I  G       + +   ++ 
Sbjct: 198 -----------QMSDDEKYLWKDLTLEQAYSYTVENAKDIIACGFDINKTFIFSVLEYMG 246

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA-----YDFVELA 188
                   R +     + + ++F  V+       S    + ++  +QA       F ++ 
Sbjct: 247 Q--SPGFYRNV---VKIQKHVTFNQVKGIFGFTDSDCIGKISFPAVQAAPSFSNSFPKIF 301

Query: 189 K---NYDCRLQMGGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTASGTKMGKTLS 242
           +   +  C +     DQ        D+  R+  PK   L +   P L  A  TKM  +  
Sbjct: 302 RDRTDIQCLIPC-AIDQDPYFRMTRDVAPRIGHPKPALLHSTFFPALQGAQ-TKMSASDP 359

Query: 243 G-AIWLNK 249
             +I+L  
Sbjct: 360 NSSIFLTD 367


>gi|227486999|ref|ZP_03917315.1| tryptophanyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC
           51867]
 gi|227093073|gb|EEI28385.1| tryptophanyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC
           51867]
          Length = 337

 Score = 46.7 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 37/238 (15%), Positives = 70/238 (29%), Gaps = 35/238 (14%)

Query: 31  CSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDES 90
            +        G   TA S H G+    +  +   +   +    +    +I  D       
Sbjct: 1   MTDKKTRVLSGIQPTADSYHLGNYLGALKQWITLQDEFEAFYFIPNLHAITVD------- 53

Query: 91  RRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSV 150
                 +E++           +       K+   + ++      + +  ++  +  F   
Sbjct: 54  ---QDPEELRNRTYAGAAQLLALG-IDPEKSTLFVQSHVHEHAELAW--VMTCLTGFGEA 107

Query: 151 NRMLS-FESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICG 209
           +RM    +  + R     S     F Y +L A D + L K     +   G DQ  ++   
Sbjct: 108 SRMTQFKDKSKKRGADRTSAGL--FTYPMLMAADIL-LYKPKYVPV---GEDQRQHLELS 161

Query: 210 IDLGERLKTPKLFALTSPLLTT--ASGT-----------KMGKTLSGAIWLNKEMTSP 254
             L +R      F  T PL       G            KM K+ S    +   +  P
Sbjct: 162 RTLADRFNKR--FGDTFPLPEGFIPKGAAKIYDLQDPTSKMSKSGSNPKGIINLLDDP 217


>gi|289425333|ref|ZP_06427110.1| tryptophan--tRNA ligase [Propionibacterium acnes SK187]
 gi|295130860|ref|YP_003581523.1| tryptophan--tRNA ligase [Propionibacterium acnes SK137]
 gi|289154311|gb|EFD02999.1| tryptophan--tRNA ligase [Propionibacterium acnes SK187]
 gi|291376639|gb|ADE00494.1| tryptophan--tRNA ligase [Propionibacterium acnes SK137]
          Length = 399

 Score = 46.7 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 42/263 (15%), Positives = 76/263 (28%), Gaps = 35/263 (13%)

Query: 22  SNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSI 80
           S+  E D+           G   T  SLH GH    +     LQ  G +   ++     +
Sbjct: 58  SDKVEADLAVHPDKWRILTGDRPTG-SLHIGHYFGSLANRVRLQSKGIESFLVVADY-QV 115

Query: 81  IGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDL 140
           I D     +    +++  +    + +       +      +    LN          +  
Sbjct: 116 IYDRDGVGD----LQANVMSNVADYLAIGIDPALTTIFTHSALPALN-------QLLLPF 164

Query: 141 LREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGS 200
           L  +            + +      E+ +S L   + + QA D +    N    L   G 
Sbjct: 165 LSLVTDAELRRNPTVKDELA---TSERPMSGLMLTFPVHQAADILFCKAN----LVPVGR 217

Query: 201 DQWGNIICGIDLGERLKT--------------PKLFALTSPLLTTASGTKMGKTLSGAIW 246
           DQ  +I     +  R                 P+     +P +    GTKM K+   AI 
Sbjct: 218 DQLPHIEQTRVIARRFDERYGRAEASKPVFPEPEALLSATPHVLGLDGTKMSKSKGNAIE 277

Query: 247 LNKEMTSPYNFWQYWRNIDDADV 269
           L           +  +   D  +
Sbjct: 278 LGMTADQTAKLIKKAKTDADRHI 300


>gi|167388657|ref|XP_001738643.1| tyrosyl-tRNA synthetase [Entamoeba dispar SAW760]
 gi|165898007|gb|EDR25011.1| tyrosyl-tRNA synthetase, putative [Entamoeba dispar SAW760]
          Length = 369

 Score = 46.7 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 41/252 (16%), Positives = 83/252 (32%), Gaps = 28/252 (11%)

Query: 10  SILSER-----GFIHQISNPRELDILCSQGV-VTAYIGYDLTASSLHAGHLTQ-LMLLFW 62
             +  R     G + +     +L  L  +     AY G++ +   +H       ++    
Sbjct: 12  EEIEARITKLLGAVEECDTINDLRALFKEKSHFVAYNGFEPSGR-IHIAQAVMTVINANK 70

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD 122
           + + G      +    + +      D     +   +I       K     F   G  +  
Sbjct: 71  IHECGGLYKIYIADWFAQLNHKMGGD-----LSKIQILG-----KYFIEVFKACGIQEGA 120

Query: 123 ALMLNNETWL-CSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA 181
           A  +     +  S  Y  L+ +I +  +VNR+     +  R   + +LS  +  Y  +Q 
Sbjct: 121 AEFVWASDLIQNSKTYWPLVLDIATKNTVNRITRCSQIMGR-DEKDALSTSQLIYPCMQC 179

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT---KMG 238
            D  EL       +   G DQ    +   +    +       L+  +L    G    KM 
Sbjct: 180 ADIFEL----GADVCQLGLDQRKVNMLAREYAPTVNRKAPIVLSHHMLMGLKGPKAGKMS 235

Query: 239 KTLSG-AIWLNK 249
           K++   AI+++ 
Sbjct: 236 KSIPDSAIFMDD 247


>gi|163783748|ref|ZP_02178734.1| tryptophanyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
 gi|159880994|gb|EDP74512.1| tryptophanyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
          Length = 395

 Score = 46.7 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 31/202 (15%), Positives = 69/202 (34%), Gaps = 26/202 (12%)

Query: 176 YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK--------TPKLFALTSP 227
           Y +LQA D + + K     +   G DQ  +I    ++  R           P+     +P
Sbjct: 197 YPVLQAADIL-IYKGEGVPV---GEDQLPHIELTREIARRFNYLYGEVFPEPEALLTETP 252

Query: 228 LLTTASGTKMGKTLSGAIWL----NKEMTSPYNFW---QYWRN----IDD-ADVVSFAKR 275
            +    G KM K+ + AI+      +        +   Q  R       D   V  + K 
Sbjct: 253 KVPGTDGRKMSKSYNNAIFFADTEGEVQLKVMKMFTDPQKLRRNDPGRPDICPVFMYHKL 312

Query: 276 LT--TLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHS 333
            T     + +ID+  +       + KK++   +   +    E  +     ++  + +   
Sbjct: 313 FTKDAAKIEQIDKDCRSGKLGCVDCKKMMLEGLEHFLSPLRERREEIKKNLKEVEKTFIE 372

Query: 334 QHMPTISISKDEVSRGMGLLTL 355
             +   +++++ +      + L
Sbjct: 373 GSIRARNVAQETMEEVREAVNL 394


>gi|241888511|ref|ZP_04775819.1| tryptophan-tRNA ligase [Gemella haemolysans ATCC 10379]
 gi|241864778|gb|EER69152.1| tryptophan-tRNA ligase [Gemella haemolysans ATCC 10379]
          Length = 338

 Score = 46.7 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 44/341 (12%), Positives = 98/341 (28%), Gaps = 50/341 (14%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKT--GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +      +     +   ++    ++  +    D   +++  + I E
Sbjct: 11  PTGK-LHLGHYVGSLKNRIALQNEDDTEVFIMIADQQALTDNA---DNPGKVI--ENITE 64

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
                  +          KT   + +    L  +    +     S    N  +  E    
Sbjct: 65  VALDYLAVG-----IDPKKTTIFIQSQIPQLAELYMYYMNLVSVSRLHRNPTVKQEINDK 119

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK---T 218
           +        F  F Y + QA D       +   + +G  DQ   +    ++         
Sbjct: 120 KFGESIPAGF--FTYPVSQAADITAFKATH---VPVG-EDQKPMLEQTREIVRDFNRTYN 173

Query: 219 PKLFALTSPLLT--------TASGT-KMGKTLSGAIWLNKEMTSPYNFWQYW------RN 263
            ++  L   +L            G  KM K+L+  I+L     +                
Sbjct: 174 KEVLVLPEIVLPPKNHARLVGIDGQGKMSKSLNNGIYLGDSEENIKAKIMKMYTDPNHIK 233

Query: 264 IDD------ADVVSFAKRLTTL--PMSEIDRMAKLQGKEINEAKKIIATEITTMV----- 310
           I+D        V  +     T    ++E+       G    + K+ +   +   +     
Sbjct: 234 IEDPGQVEGNVVFKYLDIFDTRVDEVAELKEHYSRGGLGDMKLKRRLNDVMQDYLRPIRE 293

Query: 311 HGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMG 351
              E A+  A         S  ++ + + ++ + + + G+ 
Sbjct: 294 RREEFAKDKAEVYRMLKAGSEKAEKVASATLDEVKDAMGIN 334


>gi|239831305|ref|ZP_04679634.1| hemolysin A [Ochrobactrum intermedium LMG 3301]
 gi|239823572|gb|EEQ95140.1| hemolysin A [Ochrobactrum intermedium LMG 3301]
          Length = 253

 Score = 46.7 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 9/51 (17%), Positives = 24/51 (47%)

Query: 341 ISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
           +S +   R + L  L+V+ G   + + AR  ++   +K++   ++     +
Sbjct: 1   MSGEAGDRNLRLDQLLVELGLFATRSRARDAIQRGTVKVDGKPVTKPGQTV 51


>gi|2501069|sp|Q46127|SYW_CLOLO RecName: Full=Tryptophanyl-tRNA synthetase; AltName:
           Full=Tryptophan--tRNA ligase; Short=TrpRS
 gi|1100074|gb|AAC05711.1| tryptophanyl-tRNA synthetase [Clostridium longisporum]
          Length = 341

 Score = 46.7 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 47/235 (20%), Positives = 70/235 (29%), Gaps = 34/235 (14%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSIIGDPSF-RDESRRMMRSQEIQE 101
            T   LH GH    +     LQ +G     +M      I D     D +R     +    
Sbjct: 12  PTGK-LHIGHYVGSLKNRVQLQNSGDYRSFIM------IADQQALTDNARNP--EKIRNS 62

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
            IE      +  I     K+  L+ +    L  +    L     S    N  +  E  + 
Sbjct: 63  LIEVALDYLAVGIDPL--KSTILVQSQIPELNELTMHYLNLVTLSRLERNPTVKAEIKQK 120

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--- 218
             +      FL   Y + QA D           + +G  DQ   I    ++     T   
Sbjct: 121 NFENSIPAGFL--IYPVSQAADITAFKA---TTVPVG-EDQLPMIEQAREIVRSFNTIYG 174

Query: 219 ------PKLFA--LTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNI 264
                 PK      T   L    G  KM K++  AI+L  E        Q   ++
Sbjct: 175 KEVLVEPKAVIPKGTIGRLPGTDGKAKMSKSIGNAIYLADEADV---IKQKVMSM 226


>gi|325295466|ref|YP_004281980.1| tryptophanyl-tRNA synthetase [Desulfurobacterium thermolithotrophum
           DSM 11699]
 gi|325065914|gb|ADY73921.1| tryptophanyl-tRNA synthetase [Desulfurobacterium thermolithotrophum
           DSM 11699]
          Length = 354

 Score = 46.7 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 40/295 (13%), Positives = 90/295 (30%), Gaps = 46/295 (15%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTS-IIGDPSFRDESRRMMRSQEI 99
           G   T   +H G+    +  +   +   +    +    +        +D +   +  + +
Sbjct: 33  GMRPTGK-IHLGNYLGALKTWLELQDKAECFFFIADWHAITTSYHDTKDLADNTL--EMM 89

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
            + +        S +   +   +            +  I  +R +    +   M+  E++
Sbjct: 90  ADWVAAGLDPEKSVLFVQSSVKEH-----AELHLLLSMITPVRWLERNPTYKEMM--ENL 142

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT- 218
           + R             Y +LQ  D + L K     +   G DQ  ++    ++  R    
Sbjct: 143 KDRELATYGF----LGYPVLQTAD-IVLYKADTVPV---GIDQIPHLELSREIARRFNRF 194

Query: 219 -------PKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRN-IDDA--- 267
                  P+ +   +P L    G KM K+    I+L     +     +   + + D    
Sbjct: 195 FGKLFPEPRPYLSEAPKLPGLDGRKMSKSYGNCIYL---ADTEEEVNKKVMSMVTDPSRV 251

Query: 268 -----------DVVSFAKRLTTLPM-SEIDRMAKLQGKEINEAKKIIATEITTMV 310
                       V ++ K  T L    E++   K       + KK +A  +   +
Sbjct: 252 RKTDPGHPEICSVFAYHKIFTPLDKTKELEEACKKGEIGCVQCKKELAKNLNNFL 306


>gi|313792352|gb|EFS40451.1| tryptophan--tRNA ligase [Propionibacterium acnes HL110PA1]
 gi|313801698|gb|EFS42938.1| tryptophan--tRNA ligase [Propionibacterium acnes HL110PA2]
 gi|313838412|gb|EFS76126.1| tryptophan--tRNA ligase [Propionibacterium acnes HL086PA1]
 gi|314962472|gb|EFT06572.1| tryptophan--tRNA ligase [Propionibacterium acnes HL082PA1]
 gi|315077688|gb|EFT49739.1| tryptophan--tRNA ligase [Propionibacterium acnes HL053PA2]
 gi|327453460|gb|EGF00115.1| tryptophan--tRNA ligase [Propionibacterium acnes HL092PA1]
          Length = 384

 Score = 46.7 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 42/263 (15%), Positives = 76/263 (28%), Gaps = 35/263 (13%)

Query: 22  SNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSI 80
           S+  E D+           G   T  SLH GH    +     LQ  G +   ++     +
Sbjct: 43  SDKVEADLAVHPDKWRILTGDRPTG-SLHIGHYFGSLANRVRLQSKGIESFLVVADY-QV 100

Query: 81  IGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDL 140
           I D     +    +++  +    + +       +      +    LN          +  
Sbjct: 101 IYDRDGVGD----LQTNVMSNVADYLAIGIDPALTTIFTHSALPALN-------QLLLPF 149

Query: 141 LREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGS 200
           L  +            + +      E+ +S L   + + QA D +    N    L   G 
Sbjct: 150 LSLVTDAELRRNPTVKDELA---TSERPMSGLMLTFPVHQAADILFCKAN----LVPVGR 202

Query: 201 DQWGNIICGIDLGERLKT--------------PKLFALTSPLLTTASGTKMGKTLSGAIW 246
           DQ  +I     +  R                 P+     +P +    GTKM K+   AI 
Sbjct: 203 DQLPHIEQTRVIARRFDERYGRAEASKPVFPEPEALLSATPHVLGLDGTKMSKSKGNAIE 262

Query: 247 LNKEMTSPYNFWQYWRNIDDADV 269
           L           +  +   D  +
Sbjct: 263 LGMTADQTAKLIKKAKTDADRHI 285


>gi|257437732|ref|ZP_05613487.1| S4 domain protein [Faecalibacterium prausnitzii A2-165]
 gi|257200039|gb|EEU98323.1| S4 domain protein [Faecalibacterium prausnitzii A2-165]
          Length = 71

 Score = 46.7 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 9/36 (25%), Positives = 19/36 (52%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIIS 385
           + L  L+  AG   +  EA+  ++  A+K+N  + +
Sbjct: 11  IKLDALLKYAGLCETGGEAKELVQGGAVKVNGEVCT 46


>gi|212544882|ref|XP_002152595.1| tyrosyl-tRNA synthetase [Penicillium marneffei ATCC 18224]
 gi|210065564|gb|EEA19658.1| tyrosyl-tRNA synthetase [Penicillium marneffei ATCC 18224]
          Length = 378

 Score = 46.7 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 38/228 (16%), Positives = 85/228 (37%), Gaps = 23/228 (10%)

Query: 18  IHQISNPRELDILCSQGVV-TAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGG 76
           + ++ NP  ++ +  +G     Y G   T    H+G+    + +  L   G + + L+  
Sbjct: 16  LQEVLNPELIESILEKGGTPRIYWGTATTGRP-HSGYFVPAIKIAQLLAAGCEVVILLAD 74

Query: 77  GTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK---YGTGKTDALMLNNETWLC 133
             + +      D  +  +  + ++  ++  + +  + ++     T K + ++ ++     
Sbjct: 75  VHAFL------DSMKAPL--ELVENRVKYYEKVIRAILEAVGVSTEKLEFVLGSSYQRSS 126

Query: 134 SIKYIDLLREIGSFFSV-NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYD 192
               +D+ R          +    E V+        LS L   Y ILQ  D   L     
Sbjct: 127 EY-VMDVYRLAALTSEHDAKKAGAEIVKQ--SANAPLSGL--LYPILQVLDEEYLK---- 177

Query: 193 CRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
              ++GG DQ    +   +   +L   K   L +P++   +G KM  +
Sbjct: 178 VDAELGGLDQRKLFVAATEWLPKLGYRKRAHLVTPMVAGLNGGKMSSS 225


>gi|110668729|ref|YP_658540.1| 30S ribosomal protein S4e [Haloquadratum walsbyi DSM 16790]
 gi|109626476|emb|CAJ52937.1| ribosomal protein S4.eR [Haloquadratum walsbyi DSM 16790]
          Length = 265

 Score = 46.7 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 28/53 (52%), Gaps = 1/53 (1%)

Query: 347 SRGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
             G+ L+ L+    G+A S  EAR  L   ++ +N  ++S+E+  + L D  +
Sbjct: 34  ESGVPLVILLRDVLGYADSKKEARYALNQRSVLVNGDVVSDEQRPVGLFDILA 86


>gi|254442871|ref|ZP_05056347.1| tryptophanyl-tRNA synthetase [Verrucomicrobiae bacterium DG1235]
 gi|198257179|gb|EDY81487.1| tryptophanyl-tRNA synthetase [Verrucomicrobiae bacterium DG1235]
          Length = 321

 Score = 46.7 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 41/237 (17%), Positives = 73/237 (30%), Gaps = 41/237 (17%)

Query: 41  GYDLTASSLHAGHLTQLML-LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQE- 98
           G   +   LHAG+   +M     LQ+ G +    +    S+      +   RR    +  
Sbjct: 6   GIQPSGI-LHAGNYFGMMKPSIELQEQG-EAFYFIADYHSMTSLTDAKL--RREYTKRVA 61

Query: 99  IQENIEKIKGIFSSFIKYGTGKTDALMLNNETW-LCSIKYIDLLREIGSFFSVNRMLSFE 157
           I      +    +   K         +    +W L +I  +  L    S+         +
Sbjct: 62  IDFLACGLDPKKAVLFKQSDVPEHVEL----SWILSTICPMGWLERCHSY--------KD 109

Query: 158 SVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK 217
            +   L     L    F Y +L A D +     YD  +   G DQ  ++    DL  +  
Sbjct: 110 KIAKGLATNHGL----FAYPVLMAADILI----YDADVVPVGQDQKQHVEVTRDLASKFN 161

Query: 218 TPKLFALTSPL-----------LTTASGTKMGKTLSGAIWL-NKEMTSPYNFWQYWR 262
             +L+  T  +           +    G KM K+ +  I +  +E            
Sbjct: 162 --ELYGETFVVPEPRIRREVAKVPGTDGGKMSKSYNNTIDIFGQEKAIKKRIMGMVM 216


>gi|253700547|ref|YP_003021736.1| tryptophanyl-tRNA synthetase [Geobacter sp. M21]
 gi|251775397|gb|ACT17978.1| tryptophanyl-tRNA synthetase [Geobacter sp. M21]
          Length = 327

 Score = 46.7 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 37/223 (16%), Positives = 69/223 (30%), Gaps = 33/223 (14%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   T   LH GH   ++  +   +   +         S+  + +  D  +  +    + 
Sbjct: 9   GMRPTGK-LHLGHYHGVLSNWLELQRNFECFFFAADWHSLTTEYANTDGIKDSINEMVLD 67

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
                I    S   +       A           +  I     +G    V+  L      
Sbjct: 68  WLAFGIDPEQSVIFEQSRVPQHA----------ELNLI-----LGMITPVSW-LERNPTY 111

Query: 161 SRLKRE---QSLSFLEFN-YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL 216
             ++     + LS   F  Y +L A D + + K     +   G DQ  ++    ++  R 
Sbjct: 112 KEMQENLSTKDLSTFGFLGYPVLMASD-IIVYKASRVPV---GQDQIPHLEITREIARRF 167

Query: 217 K-------TPKLFALT-SPLLTTASGTKMGKTLSGAIWLNKEM 251
                         LT +P +    G KM K+   AI+L+ + 
Sbjct: 168 NYLYGEVFPEPAALLTETPKVLGTDGRKMSKSYGNAIFLSDDA 210


>gi|282891379|ref|ZP_06299880.1| hypothetical protein pah_c052o008 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281498731|gb|EFB41049.1| hypothetical protein pah_c052o008 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 370

 Score = 46.7 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 36/219 (16%), Positives = 65/219 (29%), Gaps = 27/219 (12%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRD--ESRRMMRSQEIQE 101
            T   LH GH    +      +       ++     +   P      + R  +    I  
Sbjct: 30  PTGL-LHLGHYVGSLKNRVKLQEKFDCYFIIADLHVLTTKPEKESILKLRENISQMVIDY 88

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
               I     S I   +       +N            +L  +     +  +   E  R+
Sbjct: 89  LACGIDPQ-KSVIYLQSAVPAVYQMN--------LIFQMLISLNRLTGLPSL--KEMARN 137

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--- 218
                +S+ +    Y +LQ+ D +    +    L   G D   +I    D+  R      
Sbjct: 138 AHMSSESIPYGLVGYPVLQSADILMPRAH----LVPVGKDNEAHIELTRDIARRFNMYYG 193

Query: 219 -----PKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEM 251
                P+      P L    G  KM K+++ AI+L  + 
Sbjct: 194 EFFPLPECLLSDVPTLIGTDGQGKMSKSVNNAIFLADDA 232


>gi|332675738|gb|AEE72554.1| tryptophan--tRNA ligase [Propionibacterium acnes 266]
          Length = 403

 Score = 46.3 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 42/263 (15%), Positives = 76/263 (28%), Gaps = 35/263 (13%)

Query: 22  SNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSI 80
           S+  E D+           G   T  SLH GH    +     LQ  G +   ++     +
Sbjct: 62  SDKVEADLAVHPDKWRILTGDRPTG-SLHIGHYFGSLANRVRLQSKGIESFLVVADY-QV 119

Query: 81  IGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDL 140
           I D     +    +++  +    + +       +      +    LN          +  
Sbjct: 120 IYDRDGVGD----LQANVMSNVADYLAIGIDPALTTIFTHSALPALN-------QLLLPF 168

Query: 141 LREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGS 200
           L  +            + +      E+ +S L   + + QA D +    N    L   G 
Sbjct: 169 LSLVTDAELRRNPTVKDELA---TSERPMSGLMLTFPVHQAADILFCKAN----LVPVGR 221

Query: 201 DQWGNIICGIDLGERLKT--------------PKLFALTSPLLTTASGTKMGKTLSGAIW 246
           DQ  +I     +  R                 P+     +P +    GTKM K+   AI 
Sbjct: 222 DQLPHIEQTRVIARRFDERYGRAEASKPVFPEPEALLSATPHVLGLDGTKMSKSKGNAIE 281

Query: 247 LNKEMTSPYNFWQYWRNIDDADV 269
           L           +  +   D  +
Sbjct: 282 LGMTADQTAKLIKKAKTDADRHI 304


>gi|313112550|ref|ZP_07798214.1| S4 domain protein [Faecalibacterium cf. prausnitzii KLE1255]
 gi|310625132|gb|EFQ08423.1| S4 domain protein [Faecalibacterium cf. prausnitzii KLE1255]
          Length = 71

 Score = 46.3 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 9/36 (25%), Positives = 19/36 (52%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIIS 385
           + L  L+  AG   +  EA+  ++  A+K+N  + +
Sbjct: 11  IKLDALLKYAGLCETGGEAKELVQGGAVKVNGEVCT 46


>gi|119504000|ref|ZP_01626081.1| tryptophanyl-tRNA synthetase [marine gamma proteobacterium
           HTCC2080]
 gi|119460003|gb|EAW41097.1| tryptophanyl-tRNA synthetase [marine gamma proteobacterium
           HTCC2080]
          Length = 335

 Score = 46.3 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 20/89 (22%), Positives = 34/89 (38%), Gaps = 13/89 (14%)

Query: 168 SLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSP 227
            ++   F+Y +L A D + +   +D  +   G DQ  ++    D+ +R         T P
Sbjct: 129 GVTMGLFSYPVLMAADIL-IFNAHDVPV---GRDQIQHVEMARDIAQRFNHNFSNIFTLP 184

Query: 228 ---------LLTTASGTKMGKTLSGAIWL 247
                    +L    G KM K+    I L
Sbjct: 185 KAVVGEHVAVLQGLDGRKMSKSYGNTIPL 213


>gi|283955139|ref|ZP_06372641.1| tryptophanyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           414]
 gi|283793352|gb|EFC32119.1| tryptophanyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           414]
          Length = 314

 Score = 46.3 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 32/215 (14%), Positives = 64/215 (29%), Gaps = 32/215 (14%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   +   LH G+    +      +  ++    +    ++        E  +    +   
Sbjct: 6   GLQPSGD-LHIGNYFGAIKQMVDAQEKNQMFMFIANYHAMTSSQDG--EKLKQNSLKAAA 62

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETW-LCSIKYIDLLREIGSFFSVNRMLSFESV 159
             +        S     +   + + L    W L     + LL    S+         + V
Sbjct: 63  AFLSLGIDPKKSVFWLQSDVKEVMELY---WILSQFTPMGLLERAHSY--------KDKV 111

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
              L     L    F+Y +L A D +     +D ++   G DQ  ++    D+  ++   
Sbjct: 112 AKGLSASHGL----FSYPVLMAADILL----FDTQIVPVGKDQIQHVEIARDIALKVNNE 163

Query: 220 KLFALTSP---------LLTTASGTKMGKTLSGAI 245
                T P         ++    G KM K+    I
Sbjct: 164 WGEIFTLPEARVNEEVAVVVGTDGAKMSKSYQNTI 198


>gi|119386847|ref|YP_917902.1| RNA-binding S4 domain-containing protein [Paracoccus denitrificans
           PD1222]
 gi|119377442|gb|ABL72206.1| RNA-binding S4 domain protein [Paracoccus denitrificans PD1222]
          Length = 457

 Score = 46.3 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 19/46 (41%), Gaps = 1/46 (2%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
           +  ++ +AG   S  EA R +    + +N   I +  L +   D  
Sbjct: 17  IAKVMARAG-VASRREAERMILEGRVTVNGKKIDSPALDVTPADRI 61


>gi|154310453|ref|XP_001554558.1| hypothetical protein BC1G_07147 [Botryotinia fuckeliana B05.10]
 gi|150851478|gb|EDN26671.1| hypothetical protein BC1G_07147 [Botryotinia fuckeliana B05.10]
          Length = 474

 Score = 46.3 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 26/139 (18%), Positives = 45/139 (32%), Gaps = 14/139 (10%)

Query: 15  RGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG +    +    LD          Y G   ++ S+H GH        WLQ     P+ +
Sbjct: 77  RGIVFSHRDLHLMLDRHERGEPFFMYTGRGPSSDSMHIGHTVPFEFTKWLQDVFDVPLII 136

Query: 74  MGGGTSIIGDPSF-RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL 132
           M     +  D  +   E R       I+E            I  G       + ++  ++
Sbjct: 137 M-----LTDDEKYIFSEKR------TIKEVQSYTTSNAKDIIAVGFDPKKTFIFSDYEYM 185

Query: 133 CSIKYIDLLREIGSFFSVN 151
               Y ++ R I    ++N
Sbjct: 186 GGPFYKNVTR-ISKHVTLN 203


>gi|40063126|gb|AAR37973.1| tryptophanyl-tRNA synthetase [uncultured marine bacterium 561]
          Length = 335

 Score = 46.3 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 20/89 (22%), Positives = 34/89 (38%), Gaps = 13/89 (14%)

Query: 168 SLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSP 227
            ++   F+Y +L A D + +   +D  +   G DQ  ++    D+ +R         T P
Sbjct: 129 GVTMGLFSYPVLMAADIL-IFNAHDVPV---GRDQIQHVEMARDIAQRFNHNFSNIFTLP 184

Query: 228 ---------LLTTASGTKMGKTLSGAIWL 247
                    +L    G KM K+    I L
Sbjct: 185 KAVVGEHVAVLQGLDGRKMSKSYGNTIPL 213


>gi|312090013|ref|XP_003146456.1| tyrosyl-tRNA synthetase [Loa loa]
 gi|307758380|gb|EFO17614.1| tyrosyl-tRNA synthetase [Loa loa]
          Length = 737

 Score = 46.3 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 39/235 (16%), Positives = 77/235 (32%), Gaps = 18/235 (7%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R     +   +    L S+  +  Y G   T    H G+   +  +        +  
Sbjct: 26  LITRNLKEVLGLEKITKQLASKKKIHVYWGTATTGKP-HVGYFVPIRKIADFLSANLRVT 84

Query: 72  SLMGGGTSIIGD--PSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
            L     + + +   ++     R++  +++ + +     +    + +  G +        
Sbjct: 85  ILFADLHAFLDNLKSTWELLDNRVLYYEKVIKALLTALHVPLDQLHFVRGTSYQ------ 138

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
             L      DLLR        + + +   V  ++        L     +LQA D   L  
Sbjct: 139 --LSREYTSDLLRLCNIVTRRDALRAGAEVVKQVASPLLSGLLY---PLLQALDEQYLK- 192

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
                 Q GG DQ    I   +   +LK  K F L +P++    G+KM  +   +
Sbjct: 193 ---VDGQFGGIDQRKIFILAEEQLPKLKLGKRFHLMNPMVPGLQGSKMSSSEENS 244


>gi|255318880|ref|ZP_05360106.1| tryptophan--tRNA ligase [Acinetobacter radioresistens SK82]
 gi|262378864|ref|ZP_06072021.1| tryptophanyl-tRNA synthetase [Acinetobacter radioresistens SH164]
 gi|255304136|gb|EET83327.1| tryptophan--tRNA ligase [Acinetobacter radioresistens SK82]
 gi|262300149|gb|EEY88061.1| tryptophanyl-tRNA synthetase [Acinetobacter radioresistens SH164]
          Length = 337

 Score = 46.3 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 41/217 (18%), Positives = 68/217 (31%), Gaps = 29/217 (13%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
            T   LH GH    +      +  H    L+    ++  +    ++ RR      I E  
Sbjct: 16  PTGQ-LHLGHFVGSLRSRVGLQDSHHQHLLLADAQALTDNADNFEKVRR-----NILEVA 69

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR- 162
                +          KT   + +    L  +  +  L  +              ++ R 
Sbjct: 70  TDYLAVG-----IDPEKTTICVQSQLPALNELTML-YLNFVTVSRLERNPTIKSEIQMRG 123

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT---- 218
            +R+    FL   Y + QA D       +   +   G DQ   I    ++  RL      
Sbjct: 124 FERDIPAGFL--CYPVAQAADITA----FKATVVPVGEDQIPMIEQTNEIVRRLNRQIGR 177

Query: 219 ---PKLFALTSPL--LTTASGT-KMGKTLSGAIWLNK 249
              P+  AL S +  L    G  KM K+L   I L+ 
Sbjct: 178 ELLPECKALLSNMSRLPGFDGKAKMSKSLGNTIVLDA 214


>gi|94733605|emb|CAK04283.1| tyrosyl-tRNA synthetase [Danio rerio]
          Length = 286

 Score = 46.3 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 45/232 (19%), Positives = 72/232 (31%), Gaps = 25/232 (10%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            L  R    ++     L  +  +  +  Y G   T    H  +   +  +    K G + 
Sbjct: 12  QLITRNL-QEVLGEERLKEILKERELKVYWGTATTGKP-HVAYFVPMSKIADFLKAGCEV 69

Query: 71  ISLMGGGTSII---GDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
             L     + +     P    E R     Q I+  +E I       +K+  G        
Sbjct: 70  TILFADLHAYLDNMKAPWELLELRVKYYEQVIKAMLESIGVPLDK-LKFVKGTDYQ---- 124

Query: 128 NETWLCSIKYIDLLREIGSFFSV--NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
               L     +D+ R + S  +    +    E V+   + E  L      Y  LQA D  
Sbjct: 125 ----LSREYTLDVYR-LSSMVTEHDAKKAGAEVVK---QVEHPL-LSGLLYPGLQALDEE 175

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
            L        Q GG DQ             L   K   L +P++   +G+KM
Sbjct: 176 YLK----VDAQFGGVDQRKIFTLAEKYLPSLGYTKRSHLMNPMVPGLTGSKM 223


>gi|71274632|ref|ZP_00650920.1| Tryptophan--tRNA ligase [Xylella fastidiosa Dixon]
 gi|71899656|ref|ZP_00681810.1| Tryptophan--tRNA ligase [Xylella fastidiosa Ann-1]
 gi|170730898|ref|YP_001776331.1| tryptophanyl-tRNA synthetase [Xylella fastidiosa M12]
 gi|71164364|gb|EAO14078.1| Tryptophan--tRNA ligase [Xylella fastidiosa Dixon]
 gi|71730608|gb|EAO32685.1| Tryptophan--tRNA ligase [Xylella fastidiosa Ann-1]
 gi|167965691|gb|ACA12701.1| Tryptophan--tRNA ligase [Xylella fastidiosa M12]
          Length = 434

 Score = 46.3 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 33/214 (15%), Positives = 64/214 (29%), Gaps = 33/214 (15%)

Query: 50  HAGHLT-QLMLLFWLQKT-GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIK 107
           H G+    +          G +    +    S+I         R  +  +     +    
Sbjct: 16  HLGNYVGAIRPAIRAAGAPGTESFYFLADLHSLIKVQDPERTQRSTL--EIAATWLAC-- 71

Query: 108 GIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV--RSRLKR 165
                    G       +          + + LL  +     +NR  ++++V  ++R   
Sbjct: 72  ---------GLDPEKVWLYRQSDVPEITELMWLLTCVAGKGILNRAHAYKAVVDKNRSHG 122

Query: 166 EQ--SLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK---TPK 220
           +    ++   F Y +L A D + L   +   +   G DQ  +I    D  +R       +
Sbjct: 123 DDDAGITAGLFMYPVLMAADIL-LFNAHQVPV---GRDQIQHIEMARDFAQRFNHIYGGE 178

Query: 221 LFAL-------TSPLLTTASGTKMGKTLSGAIWL 247
            F L           L    G KM K+    + L
Sbjct: 179 YFVLPEAAIDEQVATLPGLDGRKMSKSYGNTMPL 212


>gi|111225626|ref|YP_716420.1| tryptophanyl-tRNA synthetase [Frankia alni ACN14a]
 gi|111153158|emb|CAJ64907.1| Tryptophanyl-tRNA synthetase [Frankia alni ACN14a]
          Length = 341

 Score = 46.3 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 43/259 (16%), Positives = 83/259 (32%), Gaps = 43/259 (16%)

Query: 30  LCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDE 89
           + +Q    +  G   T    H G+    +       + ++ I  +    ++    S RD 
Sbjct: 1   MAAQQPKVSLTGIKPTGEP-HLGNYIGAIRPSLELTSTYESIYFIADYHALT---SIRD- 55

Query: 90  SRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFS 149
            RR + S         I             ++D   +   +W        +L  +     
Sbjct: 56  -RRELASYTRSVAATWITLGLDPARTVFYRQSDVPEIFELSW--------VLSCVTGKGL 106

Query: 150 VNRMLSFESVRSRLKR------EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQW 203
           +NR  ++++ R R         +  ++   FNY IL A D + +  +    +   G DQ 
Sbjct: 107 MNRAHAYKAARDRNAESGVADLDAGINMGLFNYPILMAVDILIMNTD----VVPVGQDQS 162

Query: 204 GNIICGIDLGERLKT--PKLFALTSP-----------LLTTASGTKMGKTLSGAIWLNKE 250
            ++    D+          +F+L  P            L    G KM K+    I L   
Sbjct: 163 QHVEYAADIAGSFNHLFGDVFSLRIPEGIYPAGSSARTLPGTDGRKMSKSYKNTIPL--- 219

Query: 251 MTSPYNFWQYWRN--IDDA 267
             +P    +      + D+
Sbjct: 220 -FAPEKQLRKLIRGIVSDS 237


>gi|314927283|gb|EFS91114.1| ribosomal RNA large subunit methyltransferase J [Propionibacterium
           acnes HL044PA1]
          Length = 257

 Score = 46.3 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 11/58 (18%), Positives = 27/58 (46%), Gaps = 1/58 (1%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD-FDSTGNIKLSF 406
           + L   +V+AG A S   A R ++   + +N  +++   +++   D   +   + +S 
Sbjct: 13  VRLDQALVEAGLARSRTLATRLVREGRVTVNGIVVTKPAMKVSASDNLVADEEVWVSR 70


>gi|21357223|ref|NP_648895.1| Tyrosyl-tRNA synthetase [Drosophila melanogaster]
 gi|7294108|gb|AAF49462.1| Tyrosyl-tRNA synthetase [Drosophila melanogaster]
 gi|15291635|gb|AAK93086.1| LD21116p [Drosophila melanogaster]
 gi|220954646|gb|ACL89866.1| Aats-tyr-PA [synthetic construct]
 gi|220960052|gb|ACL92562.1| Aats-tyr-PA [synthetic construct]
          Length = 525

 Score = 46.3 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 53/314 (16%), Positives = 93/314 (29%), Gaps = 32/314 (10%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R    +     +L  + ++  +  Y G   T    H  +   +  +    K G +  
Sbjct: 12  LITRNL-QETLGDDKLTKILAERDLKIYWGTATTGKP-HVAYFVPMSKIADFLKAGCEVT 69

Query: 72  SLMGGGTSII---GDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
            L     + +     P    E R     Q I+  +  I       +K+  G         
Sbjct: 70  ILFADLHAYLDNMKAPWSLLELRTKYYEQVIKAMLSSIGVPLEK-LKFVKGSDYQ----- 123

Query: 129 ETWLCSIKYIDLLREIGSFFSV-NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
              L     +D+ +          +    E V+   + E  L      Y  LQA D   L
Sbjct: 124 ---LSKEYTLDVYKLSSVVTQHDAKKAGAEVVK---QVEYPL-LSGLLYPGLQALDEEYL 176

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
                   Q GG DQ            +L   K     +P++   +G KM  +   +   
Sbjct: 177 K----VDAQFGGVDQRKIFTFSEKYLPQLGYEKRIHFMNPMVPGLAGGKMSSSEEDS--K 230

Query: 248 NKEMTSPYNFWQYWR-------NIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
              + SP N  +  +       NI D  ++SF K +      E +     +  E      
Sbjct: 231 IDLLDSPANVKKKLKKAFCEPGNIADNGLLSFVKHVLFSLFKEGEGFEVNREAEHGGDVT 290

Query: 301 IIATEITTMVHGRE 314
            +  E     +  +
Sbjct: 291 FLKYEDLEKYYAED 304


>gi|260655290|ref|ZP_05860778.1| tryptophan--tRNA ligase [Jonquetella anthropi E3_33 E1]
 gi|260629738|gb|EEX47932.1| tryptophan--tRNA ligase [Jonquetella anthropi E3_33 E1]
          Length = 334

 Score = 46.3 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 32/237 (13%), Positives = 74/237 (31%), Gaps = 36/237 (15%)

Query: 41  GYDLTASSLHAGHLTQLML--LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQE 98
           G   T   LH GH+   +   L   +    +    +    ++    ++ D +   +  +E
Sbjct: 7   GMRPTGK-LHLGHMAGALTNWLKLQRDPNVECFFGIVDWHAMTS--NYADMTSLKVNCEE 63

Query: 99  IQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
           +  +   +         +        +             +L   +G    +  +    +
Sbjct: 64  VLLDWLAVGLDPEKSPIFLQSHVHQHV-------------ELALALGMLTPLGWLERCPT 110

Query: 159 VRSRLK--REQSLSFLEFN-YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER 215
            + ++     + L    F  Y +L A D + + K  D  +   G DQ  ++     +  R
Sbjct: 111 YKEQILNLSNKDLGTYGFLGYPVLMAADIL-IYKATDVPV---GEDQTAHLELARAIANR 166

Query: 216 LKT-------PKLFALT-SPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNI 264
                          LT +P +    G KM K+   ++ ++         W+  R +
Sbjct: 167 FNNFYRPVFPEPQIMLTATPKVPGTDGRKMSKSYGNSLMISDRAD---ALWEKIRTM 220


>gi|73540207|ref|YP_294727.1| tryptophanyl-tRNA synthetase II [Ralstonia eutropha JMP134]
 gi|72117620|gb|AAZ59883.1| tryptophanyl-tRNA synthetase [Ralstonia eutropha JMP134]
          Length = 366

 Score = 46.3 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 38/221 (17%), Positives = 64/221 (28%), Gaps = 29/221 (13%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
            T   LH GH    +      +  H+   L+    ++  +    D+ RR      + E  
Sbjct: 42  PTGP-LHLGHYVGSLKTRVQLQDTHEQYLLLADTQAMTDNAHDPDKVRR-----NVLEVA 95

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR- 162
                +          KT   + +    L  +  +  L  +            E +++R 
Sbjct: 96  LDYLAVG-----IDPTKTTITVQSYLPALAELTLM-YLNFVTVSRLERNPTIKEEIQARG 149

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT---- 218
             R+    F    Y   QA D      +    +   G DQ   I    ++  R+      
Sbjct: 150 FGRDIPAGF--MCYPAAQAADITAFKAD----IVPVGEDQAPLIEQTNEIVRRINHQVGR 203

Query: 219 ---PKLFALTSPL--LTTASGT-KMGKTLSGAIWLNKEMTS 253
               +  AL      L    G  KM K+   AI L      
Sbjct: 204 DVLKECQALIPKFGRLPGVDGKAKMSKSQGNAIALGASPEQ 244


>gi|71899301|ref|ZP_00681462.1| Tryptophan--tRNA ligase [Xylella fastidiosa Ann-1]
 gi|71730927|gb|EAO32997.1| Tryptophan--tRNA ligase [Xylella fastidiosa Ann-1]
          Length = 434

 Score = 46.3 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 33/214 (15%), Positives = 64/214 (29%), Gaps = 33/214 (15%)

Query: 50  HAGHLT-QLMLLFWLQKT-GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIK 107
           H G+    +          G +    +    S+I         R  +  +     +    
Sbjct: 16  HLGNYVGAIRPAIRAAGAPGTESFYFLADLHSLIKVQDPERTQRSTL--EIAATWLAC-- 71

Query: 108 GIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV--RSRLKR 165
                    G       +          + + LL  +     +NR  ++++V  ++R   
Sbjct: 72  ---------GLDPEKVWLYRQSDVPEITELMWLLTCVAGKGILNRAHAYKAVVDKNRSHG 122

Query: 166 EQ--SLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK---TPK 220
           +    ++   F Y +L A D + L   +   +   G DQ  +I    D  +R       +
Sbjct: 123 DDDAGITAGLFMYPVLMAADIL-LFNAHQVPV---GRDQIQHIEMARDFAQRFNHIYGGE 178

Query: 221 LFAL-------TSPLLTTASGTKMGKTLSGAIWL 247
            F L           L    G KM K+    + L
Sbjct: 179 YFVLPEAAIDEQVATLPGLDGRKMSKSYGNTMPL 212


>gi|253744472|gb|EET00680.1| Tryptophanyl-tRNA synthetase [Giardia intestinalis ATCC 50581]
          Length = 424

 Score = 46.3 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 22/140 (15%), Positives = 43/140 (30%), Gaps = 11/140 (7%)

Query: 15  RGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG  +   +  +      +G  V  Y G   ++ +LH GHL   +   +LQ      + +
Sbjct: 48  RGLFYAHRDFEQFLTHYEKGLPVYIYTGRGPSSDALHLGHLLPFIFTKYLQDAFKCYVVI 107

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                 +  D  F     R +  +EI              I  G       +  N  +L 
Sbjct: 108 -----QLTDDEKFLRN--RGLSYKEIDAYTA---ENIKDIIACGFDPEKTFIFINSQYLG 157

Query: 134 SIKYIDLLREIGSFFSVNRM 153
                     +     ++++
Sbjct: 158 LKNRYRFSCLVDRMLPISQL 177


>gi|325922256|ref|ZP_08184040.1| tryptophanyl-tRNA synthetase [Xanthomonas gardneri ATCC 19865]
 gi|325547264|gb|EGD18334.1| tryptophanyl-tRNA synthetase [Xanthomonas gardneri ATCC 19865]
          Length = 454

 Score = 46.3 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 34/217 (15%), Positives = 64/217 (29%), Gaps = 38/217 (17%)

Query: 50  HAGHLTQLMLLFWLQKTGHKP--ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIK 107
           H G+    +        G        +    S+I         R  +  +     +    
Sbjct: 41  HLGNYVGAIRPAIQASAGADAESFYFLADLHSLIKAQDPARTQRSTL--EIAASWLAC-- 96

Query: 108 GIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV--RSRLKR 165
                    G                + + + LL  +     +NR  ++++   ++R + 
Sbjct: 97  ---------GLDPETVWFYRQSDVPETTELLWLLTCVAGKGILNRAHAYKAAVDKNRAEG 147

Query: 166 EQ---SLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLF 222
           E     +S   F Y +L A D + +   +   +   G DQ  +I    D  +R     ++
Sbjct: 148 EDEDAGVSAGLFMYPVLMAADIL-IFNAHKVPV---GRDQIQHIEMARDFAQRFN--HVY 201

Query: 223 A---LTSP---------LLTTASGTKMGKTLSGAIWL 247
                T P          L    G KM K+    I L
Sbjct: 202 GRDFFTLPEAVIDEQVSTLPGLDGRKMSKSYGNTIPL 238


>gi|195440688|ref|XP_002068172.1| GK10371 [Drosophila willistoni]
 gi|194164257|gb|EDW79158.1| GK10371 [Drosophila willistoni]
          Length = 707

 Score = 46.3 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 49/339 (14%), Positives = 93/339 (27%), Gaps = 71/339 (20%)

Query: 35  VVTAYIGYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRM 93
               + G   T + LH G+    +     LQK        +          S        
Sbjct: 102 PRRIFSGIQPTGA-LHLGNYLGAVRKWTQLQKARDDVTVCIVDM------HSITMPHNPP 154

Query: 94  MRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRM 153
           +  + I      +             ++   + +       + +I  L  + +   + ++
Sbjct: 155 VLRENIFTLAATLLACG-----IDPCRSTLFVQSAVLEHSELNWI--LSSLTTLPRLAQL 207

Query: 154 LSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLG 213
             F+  +SR+ ++  L    + Y +LQA D + L K     +   G+DQ  +I     L 
Sbjct: 208 PQFKE-KSRMLKDVPLGL--YVYPVLQAAD-IMLYKATHVPV---GADQLQHIQLAQHLA 260

Query: 214 ERLKTPKLFALTSP----LLTTASG----------TKMGKTLSGAIWLNKEMTSPYNFWQ 259
               T   +  T P    L+  +             KM K+          + SP    +
Sbjct: 261 RSFNTR--YGDTFPVCHALIEESEASRVLSLRDPTKKMSKSEENPKATINIIDSPEQITE 318

Query: 260 YWRN-----IDD---------------------------ADVVSFAKRLTTLPMSEIDRM 287
             R        D                           + V       T      +   
Sbjct: 319 KIRKAITDFTSDISYNPSTRPGVSNLVSIHAQVTGQSISSVVEEANTLDTGKYKDRVAEA 378

Query: 288 AKLQGKEINE-AKKIIATEITTMVHGREEAEKAATAAME 325
                + I E  ++ +A     +      AEKA   A +
Sbjct: 379 IIEHLRPIREQIQQHLAKRNELIYMLEIGAEKARQTAQQ 417


>gi|328948219|ref|YP_004365556.1| tryptophanyl-tRNA synthetase [Treponema succinifaciens DSM 2489]
 gi|328448543|gb|AEB14259.1| tryptophanyl-tRNA synthetase [Treponema succinifaciens DSM 2489]
          Length = 361

 Score = 46.3 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 55/355 (15%), Positives = 109/355 (30%), Gaps = 52/355 (14%)

Query: 26  ELDILCSQGVVTAYIGYDLTASSLHAGHLTQ-LMLLFWLQKTGHKPISLMGGGTSIIGDP 84
           E DI  +        G   T + LH GH    L     L K G   + L+     +    
Sbjct: 23  EADIQVNPQKYRVLTGDRPTGN-LHIGHYFGSLQNRVRLAKLGVPTMILIADYQVLTDHD 81

Query: 85  SFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREI 144
           +F   S      Q + + +        + I Y    +     N          +  +  +
Sbjct: 82  AFDKIS--QNTKQLVIDYLAAGIEPGENVIIY--PHSYIPECN-------QLMLPFMTLV 130

Query: 145 GSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWG 204
            +          E + S      +++   + Y I QA D   L    +      G DQ  
Sbjct: 131 SNAELSRNPTVKEEIAS--AGLTNVNAGMYTYPIHQACD--ILFCKGNVV--PVGKDQLP 184

Query: 205 NIICGIDLGERLKTP------KLFAL------TSPLLTTASG-TKMGKTLSGAIWLNKEM 251
           +I    ++ +            +F L       +P +    G  KM K+   AI+L    
Sbjct: 185 HIELTRNIAKAFNRKFCKNREPVFPLPQALLSKTPSILGLDGSQKMSKSRGNAIFLCSTE 244

Query: 252 TSPYNFWQYWRNIDDA----------DVVSFAKRLTTLPMSE-IDRMAKLQGKEINEAKK 300
                  +  +   +           +V +    ++     E  D   ++  K   E KK
Sbjct: 245 DETAYLIKKAKTDSERVITYDPENRPEVANLLMLISLCTKEEPADIAERIGEKGSGELKK 304

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTL 355
           ++A  +          E+      +  ++  +  ++  + +   E +R + + TL
Sbjct: 305 VLAEALN---------EELRPLRQKRAELEKNPDYIRQVLLEGVEKARAIAIKTL 350


>gi|294775216|ref|ZP_06740740.1| pseudouridylate synthase [Bacteroides vulgatus PC510]
 gi|294450921|gb|EFG19397.1| pseudouridylate synthase [Bacteroides vulgatus PC510]
          Length = 488

 Score = 46.3 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 13/71 (18%), Positives = 31/71 (43%), Gaps = 1/71 (1%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           + +  + L   +  AG   S  EA   + +  + +N  +++    +IK  D     +  +
Sbjct: 248 DPNEPIRLNKFLANAGIC-SRREADEFITAGVVSVNGEVVTELGTKIKRTDEVKFHDEPV 306

Query: 405 SFGKKNHIICH 415
           S  +K +I+ +
Sbjct: 307 SIERKTYILLN 317


>gi|254884798|ref|ZP_05257508.1| ribosomal large subunit pseudouridine synthase B [Bacteroides sp.
           4_3_47FAA]
 gi|319644140|ref|ZP_07998665.1| pseudouridine synthase [Bacteroides sp. 3_1_40A]
 gi|254837591|gb|EET17900.1| ribosomal large subunit pseudouridine synthase B [Bacteroides sp.
           4_3_47FAA]
 gi|317384262|gb|EFV65233.1| pseudouridine synthase [Bacteroides sp. 3_1_40A]
          Length = 487

 Score = 46.3 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 13/71 (18%), Positives = 31/71 (43%), Gaps = 1/71 (1%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           + +  + L   +  AG   S  EA   + +  + +N  +++    +IK  D     +  +
Sbjct: 247 DPNEPIRLNKFLANAGIC-SRREADEFITAGVVSVNGEVVTELGTKIKRTDEVKFHDEPV 305

Query: 405 SFGKKNHIICH 415
           S  +K +I+ +
Sbjct: 306 SIERKTYILLN 316


>gi|237708147|ref|ZP_04538628.1| ribosomal large subunit pseudouridine synthase B [Bacteroides sp.
           9_1_42FAA]
 gi|229457700|gb|EEO63421.1| ribosomal large subunit pseudouridine synthase B [Bacteroides sp.
           9_1_42FAA]
          Length = 485

 Score = 46.3 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 13/71 (18%), Positives = 31/71 (43%), Gaps = 1/71 (1%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           + +  + L   +  AG   S  EA   + +  + +N  +++    +IK  D     +  +
Sbjct: 245 DPNEPIRLNKFLANAGIC-SRREADEFITAGVVSVNGEVVTELGTKIKRTDEVKFHDEPV 303

Query: 405 SFGKKNHIICH 415
           S  +K +I+ +
Sbjct: 304 SIERKTYILLN 314


>gi|237723682|ref|ZP_04554163.1| ribosomal large subunit pseudouridine synthase B [Bacteroides sp.
           D4]
 gi|265756803|ref|ZP_06090791.1| ribosomal large subunit pseudouridine synthase B [Bacteroides sp.
           3_1_33FAA]
 gi|229437893|gb|EEO47970.1| ribosomal large subunit pseudouridine synthase B [Bacteroides dorei
           5_1_36/D4]
 gi|263233589|gb|EEZ19209.1| ribosomal large subunit pseudouridine synthase B [Bacteroides sp.
           3_1_33FAA]
          Length = 485

 Score = 46.3 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 13/71 (18%), Positives = 31/71 (43%), Gaps = 1/71 (1%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           + +  + L   +  AG   S  EA   + +  + +N  +++    +IK  D     +  +
Sbjct: 245 DPNEPIRLNKFLANAGIC-SRREADEFITAGVVSVNGEVVTELGTKIKRTDEVKFHDEPV 303

Query: 405 SFGKKNHIICH 415
           S  +K +I+ +
Sbjct: 304 SIERKTYILLN 314


>gi|150004186|ref|YP_001298930.1| ribosomal large subunit pseudouridine synthase B [Bacteroides
           vulgatus ATCC 8482]
 gi|149932610|gb|ABR39308.1| ribosomal large subunit pseudouridine synthase B [Bacteroides
           vulgatus ATCC 8482]
          Length = 488

 Score = 46.3 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 13/71 (18%), Positives = 31/71 (43%), Gaps = 1/71 (1%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           + +  + L   +  AG   S  EA   + +  + +N  +++    +IK  D     +  +
Sbjct: 248 DPNEPIRLNKFLANAGIC-SRREADEFITAGVVSVNGEVVTELGTKIKRTDEVKFHDEPV 306

Query: 405 SFGKKNHIICH 415
           S  +K +I+ +
Sbjct: 307 SIERKTYILLN 317


>gi|159477893|ref|XP_001697043.1| hypothetical protein CHLREDRAFT_192647 [Chlamydomonas reinhardtii]
 gi|158274955|gb|EDP00735.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 403

 Score = 46.3 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 61/337 (18%), Positives = 113/337 (33%), Gaps = 55/337 (16%)

Query: 15  RGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      + +E+     +G     Y G   ++ +LH GHL   M   +LQ     P+ +
Sbjct: 70  RGIFFAHRDLQEILDCYEKGIPFYLYTGRGPSSEALHLGHLVPFMFTKYLQDAFGVPLVI 129

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                         D+ + + R  +I E     +      I  G   +   + ++  ++ 
Sbjct: 130 -----------QLTDDEKSLWRGLDIDEARRLARENAKDIIACGFDVSKTFIFSDFEFVG 178

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQS-LSFLEFNYMILQA----YD-FVEL 187
              Y +++R I    ++N++         ++     ++F       +QA     D F  +
Sbjct: 179 GAFYRNIIR-IQRCVTMNQV--RGIFGFSMEDNIGKIAF-----PAVQAAPSFPDCFPHM 230

Query: 188 A---KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFAL---TSPLLTTASGTKMGKT- 240
               K+  C +     DQ        D+  R+   K   +     P L   SG KM  + 
Sbjct: 231 FGTRKDIRCLIPC-AIDQDPYFRMTRDVAPRIGHQKPALIESKFFPALQGESG-KMSASD 288

Query: 241 LSGAIWLN------KEMTSPYNFWQ----------YWRNIDDADVVSFAKRL--TTLPMS 282
            + AI++N      K+  + Y F               N+       +          ++
Sbjct: 289 TTSAIFVNDTPAQIKDKINKYAFSGGGATVEEHRAKGANLAVDVPWKYLNFFMEDDNKLA 348

Query: 283 EIDRMAKLQGKEINEAKKIIATEITTMV--HGREEAE 317
            I            E KK + T +T MV  H R  A+
Sbjct: 349 RIGEEYGSGRMLTGEIKKELITVLTDMVSRHQRARAQ 385


>gi|78358646|ref|YP_390095.1| tryptophanyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|78221051|gb|ABB40400.1| tryptophanyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 329

 Score = 46.3 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 32/227 (14%), Positives = 66/227 (29%), Gaps = 41/227 (18%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESR-RMMRSQEI 99
           G   T + LH GH   ++  +   +   +    +    ++  D  F D +R +    + +
Sbjct: 9   GMRPTGA-LHLGHYFGVLKNWVEMQHEMEAFFFVADWHALTSD--FADPTRIKGFVPELV 65

Query: 100 QENI-------EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNR 152
            + +       +      S   ++        M+    WL                   +
Sbjct: 66  MDWVASGLDPQKCTIFQQSQVKQHAELHLLLSMITPLGWLERCPTY--------KEQQQQ 117

Query: 153 MLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL 212
           + + +                  Y +L A D + + +     +   G DQ  ++    ++
Sbjct: 118 ITNKDL------GNYGF----LGYPVLMASDIL-IYRPQWVPV---GQDQLPHLEMTREI 163

Query: 213 GERLKT-------PKLFALTSPL-LTTASGTKMGKTLSGAIWLNKEM 251
             R               LT         G KM K+   AI L + M
Sbjct: 164 CRRFNHFYGEYLVEPQARLTPAAKCPGLDGRKMSKSYGNAIHLGEPM 210


>gi|262382422|ref|ZP_06075559.1| ribosomal large subunit pseudouridine synthase B [Bacteroides sp.
           2_1_33B]
 gi|262295300|gb|EEY83231.1| ribosomal large subunit pseudouridine synthase B [Bacteroides sp.
           2_1_33B]
          Length = 334

 Score = 46.3 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 25/52 (48%), Gaps = 1/52 (1%)

Query: 344 DEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
            + +  + L   +  AG   S  EA   ++  A+K+N+ +++    +I  QD
Sbjct: 93  ADPNEPIRLNKFLSNAGVC-SRREADEFIQKGAVKVNDVVVTELGTKITRQD 143


>gi|269139696|ref|YP_003296397.1| tryptophanyl-tRNA synthetase [Edwardsiella tarda EIB202]
 gi|267985357|gb|ACY85186.1| tryptophanyl-tRNA synthetase [Edwardsiella tarda EIB202]
 gi|304559565|gb|ADM42229.1| Tryptophanyl-tRNA synthetase [Edwardsiella tarda FL6-60]
          Length = 343

 Score = 46.3 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 33/220 (15%), Positives = 67/220 (30%), Gaps = 27/220 (12%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
            T   LH GH    +      +       ++     +  + S     R    +  I + +
Sbjct: 21  PTGP-LHLGHYVGSLRQRLALQQRFPLYVMIADLQGLTDNGS-----RPQKVADNILQVM 74

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL 163
                +          +    + +    L  +  + +     +  + N  +  E  +   
Sbjct: 75  ADYLAVG-----IDPQRATLCLQSALPALAELTMLYMNIVSVARVARNPTVKTEIAQKGF 129

Query: 164 KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT----- 218
                  FL   Y I QA D      +   R+ +G  DQ   +    ++ +R+       
Sbjct: 130 AHSLPAGFL--LYPISQAADITAFCAD---RIPVG-DDQLPMLEQTNEIVQRMNALLPQP 183

Query: 219 --PKLFALTSPL--LTTASGT-KMGKTLSGAIWLNKEMTS 253
                 A+ S +  L    G  KM K+L  A+ L+ +   
Sbjct: 184 VLRPCQAILSQVGRLPGIDGNAKMSKSLGNALPLSADPAQ 223


>gi|146342900|ref|YP_001207948.1| putative pseudouridine synthase, Rsu:RNA-binding S4:pseudouridine
           synthase [Bradyrhizobium sp. ORS278]
 gi|146195706|emb|CAL79733.1| Putative Pseudouridine synthase, Rsu:RNA-binding S4:Pseudouridine
           synthase [Bradyrhizobium sp. ORS278]
          Length = 683

 Score = 46.3 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 12/71 (16%), Positives = 24/71 (33%), Gaps = 7/71 (9%)

Query: 328 DMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNE 387
              +     P           G  +  ++ +AG A S  +A   +    + +N  II++ 
Sbjct: 350 SKRVVPDEAP------KPRKTGERIAKVLARAGLA-SRRDAEEMVTQGRVSVNGRIINSP 402

Query: 388 KLQIKLQDFDS 398
            L +   D   
Sbjct: 403 ALDVTENDEIK 413


>gi|148253231|ref|YP_001237816.1| putative pseudouridine synthase, Rsu [Bradyrhizobium sp. BTAi1]
 gi|146405404|gb|ABQ33910.1| Putative Pseudouridine synthase, Rsu [Bradyrhizobium sp. BTAi1]
          Length = 690

 Score = 46.3 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 10/51 (19%), Positives = 22/51 (43%), Gaps = 1/51 (1%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
             G  +  ++ +AG A S  +A   +    + +N  +I++  L +   D  
Sbjct: 371 KAGDRIAKVLARAGLA-SRRDAEEMVTQGRVTVNGRVINSPALDVTENDVI 420


>gi|62460630|ref|NP_001013188.2| tryptophanyl-tRNA synthetase, cytoplasmic [Rattus norvegicus]
          Length = 475

 Score = 46.3 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 50/345 (14%), Positives = 108/345 (31%), Gaps = 50/345 (14%)

Query: 15  RGFIHQISN-PRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +  + LD   ++     Y G   ++ ++H GHL   +   WLQ     P+ +
Sbjct: 138 RGIFFSHRDMNQILDAYENKKPFYLYTGRGPSSEAMHLGHLVPFIFTKWLQDVFDVPLVI 197

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                         D+ + + +   +++            I  G       + ++  ++ 
Sbjct: 198 -----------QMSDDEKYLWKDLTLEQAYSYTVENAKDIIACGFDVNKTFIFSDLEYMG 246

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA-----YDFVELA 188
                   + +     + + ++F  V+       S    + ++  +QA       F ++ 
Sbjct: 247 Q--SPGFYKNV---VKIQKHVTFNQVKGIFGFTDSDCIGKISFPAVQAAPSFSNSFPKIF 301

Query: 189 K---NYDCRLQMGGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTASGTKMGKTLS 242
           +   +  C +     DQ        D+  R+  PK   L +   P L  A  TKM  +  
Sbjct: 302 RDRTDIQCLIPC-AIDQDPYFRMTRDVAPRIGHPKPALLHSTFFPALQGAQ-TKMSASDP 359

Query: 243 G-AIWLNKEMTSPYNFWQY--WRNIDDA-----------DVVSFAKRLTTL-----PMSE 283
             +I+L        +      +    D            +V      LT        + +
Sbjct: 360 NSSIFLTDTAKQIKSKVNKHAFSGGSDTVEEHRQFGGNCEVDVSFMYLTFFLEDDDSLEQ 419

Query: 284 IDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAA-TAAMECF 327
           I +          E KK +   +  ++   +   KA     ++ F
Sbjct: 420 IRKDYTSGAMLTGELKKTLIDVLQPLIAEHQARRKAVTEETVKEF 464


>gi|307287783|ref|ZP_07567823.1| tryptophan--tRNA ligase [Enterococcus faecalis TX0109]
 gi|306501232|gb|EFM70536.1| tryptophan--tRNA ligase [Enterococcus faecalis TX0109]
 gi|315164797|gb|EFU08814.1| tryptophan--tRNA ligase [Enterococcus faecalis TX1302]
          Length = 334

 Score = 46.3 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 53/342 (15%), Positives = 100/342 (29%), Gaps = 55/342 (16%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
            T   LH GH    +      +        +     +I D      +      +++  N+
Sbjct: 10  PTGK-LHLGHYVGSLKKRVEMQADPTNQLFV-----MIADLQ--ALTDNAKNPEKVSANV 61

Query: 104 EKIKGIFSSFIKY-----GTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
                     + Y        KT   + +    L  +    L     S    N  +  E 
Sbjct: 62  ------LEVALDYLAVGLDPTKTTIFIQSQIPQLAELTMYYLNLVTTSRVRRNPTVKAEI 115

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
            + +        F  F Y + QA D       +   L   G DQ   +    ++      
Sbjct: 116 EQKKFGEGVPTGF--FIYPVSQAADITA----FQANLVPVGEDQKPMLEQAQEIVHSFNQ 169

Query: 219 PKLFALTSP----------LLTTASGT-KMGKTLSGAIWLNKEMT--SPYNFWQYW---- 261
                L  P           L    G  KM K+L   I+L+             Y     
Sbjct: 170 TYGEVLVRPEAVLPPKGMGRLPGIDGNGKMSKSLGNGIYLSDPAEVVQKKVMSMYTDPNH 229

Query: 262 RNIDD------ADVVSFAKRLTTLP--MSEIDRMAKLQGKEINEAKK----IIATEITTM 309
             I+D        V ++          + E+    +  G    + K+    ++  E+  +
Sbjct: 230 IRIEDPGQVEGNMVFTYLDVFGKEKEYIEELKEHYRHGGLGDVKIKRYLIEVLEEELAPI 289

Query: 310 VHGREEAEKAATAAME-CFDMSIHSQHMPTISISKDEVSRGM 350
              REE  K   A ME     S+ ++ +   ++++ + + G+
Sbjct: 290 RRRREELAKNPEAIMEMLHKGSLAAEKVAAQTLTEVKKAMGI 331


>gi|313764127|gb|EFS35491.1| tryptophan--tRNA ligase [Propionibacterium acnes HL013PA1]
 gi|313771960|gb|EFS37926.1| tryptophan--tRNA ligase [Propionibacterium acnes HL074PA1]
 gi|313807191|gb|EFS45684.1| tryptophan--tRNA ligase [Propionibacterium acnes HL087PA2]
 gi|313809688|gb|EFS47422.1| tryptophan--tRNA ligase [Propionibacterium acnes HL083PA1]
 gi|313812627|gb|EFS50341.1| tryptophan--tRNA ligase [Propionibacterium acnes HL025PA1]
 gi|313816219|gb|EFS53933.1| tryptophan--tRNA ligase [Propionibacterium acnes HL059PA1]
 gi|313819385|gb|EFS57099.1| tryptophan--tRNA ligase [Propionibacterium acnes HL046PA2]
 gi|313820649|gb|EFS58363.1| tryptophan--tRNA ligase [Propionibacterium acnes HL036PA1]
 gi|313822545|gb|EFS60259.1| tryptophan--tRNA ligase [Propionibacterium acnes HL036PA2]
 gi|313825519|gb|EFS63233.1| tryptophan--tRNA ligase [Propionibacterium acnes HL063PA1]
 gi|313827486|gb|EFS65200.1| tryptophan--tRNA ligase [Propionibacterium acnes HL063PA2]
 gi|313830025|gb|EFS67739.1| tryptophan--tRNA ligase [Propionibacterium acnes HL007PA1]
 gi|313832972|gb|EFS70686.1| tryptophan--tRNA ligase [Propionibacterium acnes HL056PA1]
 gi|314914856|gb|EFS78687.1| tryptophan--tRNA ligase [Propionibacterium acnes HL005PA4]
 gi|314920403|gb|EFS84234.1| tryptophan--tRNA ligase [Propionibacterium acnes HL050PA3]
 gi|314924893|gb|EFS88724.1| tryptophan--tRNA ligase [Propionibacterium acnes HL036PA3]
 gi|314929968|gb|EFS93799.1| tryptophan--tRNA ligase [Propionibacterium acnes HL067PA1]
 gi|314956496|gb|EFT00784.1| tryptophan--tRNA ligase [Propionibacterium acnes HL027PA1]
 gi|314957340|gb|EFT01443.1| tryptophan--tRNA ligase [Propionibacterium acnes HL002PA1]
 gi|314960459|gb|EFT04561.1| tryptophan--tRNA ligase [Propionibacterium acnes HL002PA2]
 gi|314967662|gb|EFT11761.1| tryptophan--tRNA ligase [Propionibacterium acnes HL037PA1]
 gi|314972828|gb|EFT16925.1| tryptophan--tRNA ligase [Propionibacterium acnes HL053PA1]
 gi|314975749|gb|EFT19844.1| tryptophan--tRNA ligase [Propionibacterium acnes HL045PA1]
 gi|314978147|gb|EFT22241.1| tryptophan--tRNA ligase [Propionibacterium acnes HL072PA2]
 gi|314983653|gb|EFT27745.1| tryptophan--tRNA ligase [Propionibacterium acnes HL005PA1]
 gi|314986304|gb|EFT30396.1| tryptophan--tRNA ligase [Propionibacterium acnes HL005PA2]
 gi|314989609|gb|EFT33700.1| tryptophan--tRNA ligase [Propionibacterium acnes HL005PA3]
 gi|315080849|gb|EFT52825.1| tryptophan--tRNA ligase [Propionibacterium acnes HL078PA1]
 gi|315084646|gb|EFT56622.1| tryptophan--tRNA ligase [Propionibacterium acnes HL027PA2]
 gi|315085331|gb|EFT57307.1| tryptophan--tRNA ligase [Propionibacterium acnes HL002PA3]
 gi|315088608|gb|EFT60584.1| tryptophan--tRNA ligase [Propionibacterium acnes HL072PA1]
 gi|315095794|gb|EFT67770.1| tryptophan--tRNA ligase [Propionibacterium acnes HL038PA1]
 gi|315098855|gb|EFT70831.1| tryptophan--tRNA ligase [Propionibacterium acnes HL059PA2]
 gi|315101545|gb|EFT73521.1| tryptophan--tRNA ligase [Propionibacterium acnes HL046PA1]
 gi|315109396|gb|EFT81372.1| tryptophan--tRNA ligase [Propionibacterium acnes HL030PA2]
 gi|327327117|gb|EGE68896.1| tryptophan--tRNA ligase [Propionibacterium acnes HL096PA3]
 gi|327329825|gb|EGE71580.1| tryptophan--tRNA ligase [Propionibacterium acnes HL096PA2]
 gi|327329927|gb|EGE71681.1| tryptophan--tRNA ligase [Propionibacterium acnes HL097PA1]
 gi|327442655|gb|EGE89309.1| tryptophan--tRNA ligase [Propionibacterium acnes HL043PA1]
 gi|327443707|gb|EGE90361.1| tryptophan--tRNA ligase [Propionibacterium acnes HL043PA2]
 gi|327443741|gb|EGE90395.1| tryptophan--tRNA ligase [Propionibacterium acnes HL013PA2]
 gi|327452198|gb|EGE98852.1| tryptophan--tRNA ligase [Propionibacterium acnes HL087PA3]
 gi|327452703|gb|EGE99357.1| tryptophan--tRNA ligase [Propionibacterium acnes HL083PA2]
 gi|328752859|gb|EGF66475.1| tryptophan--tRNA ligase [Propionibacterium acnes HL025PA2]
 gi|328753874|gb|EGF67490.1| tryptophan--tRNA ligase [Propionibacterium acnes HL087PA1]
 gi|328754842|gb|EGF68458.1| tryptophan--tRNA ligase [Propionibacterium acnes HL020PA1]
 gi|328761495|gb|EGF75019.1| tryptophan--tRNA ligase [Propionibacterium acnes HL099PA1]
          Length = 384

 Score = 46.3 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 42/263 (15%), Positives = 76/263 (28%), Gaps = 35/263 (13%)

Query: 22  SNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSI 80
           S+  E D+           G   T  SLH GH    +     LQ  G +   ++     +
Sbjct: 43  SDKVEADLAVHPDKWRILTGDRPTG-SLHIGHYFGSLANRVRLQSKGIESFLVVADY-QV 100

Query: 81  IGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDL 140
           I D     +    +++  +    + +       +      +    LN          +  
Sbjct: 101 IYDRDGVGD----LQANVMSNVADYLAIGIDPALTTIFTHSALPALN-------QLLLPF 149

Query: 141 LREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGS 200
           L  +            + +      E+ +S L   + + QA D +    N    L   G 
Sbjct: 150 LSLVTDAELRRNPTVKDELA---TSERPMSGLMLTFPVHQAADILFCKAN----LVPVGR 202

Query: 201 DQWGNIICGIDLGERLKT--------------PKLFALTSPLLTTASGTKMGKTLSGAIW 246
           DQ  +I     +  R                 P+     +P +    GTKM K+   AI 
Sbjct: 203 DQLPHIEQTRVIARRFDERYGRAEASKPVFPEPEALLSATPHVLGLDGTKMSKSKGNAIE 262

Query: 247 LNKEMTSPYNFWQYWRNIDDADV 269
           L           +  +   D  +
Sbjct: 263 LGMTADQTAKLIKKAKTDADRHI 285


>gi|313206753|ref|YP_004045930.1| tryptophanyl-tRNA synthetase [Riemerella anatipestifer DSM 15868]
 gi|312446069|gb|ADQ82424.1| tryptophanyl-tRNA synthetase [Riemerella anatipestifer DSM 15868]
 gi|315023825|gb|EFT36827.1| tryptophanyl-tRNA synthetase [Riemerella anatipestifer RA-YM]
 gi|325335808|gb|ADZ12082.1| Tryptophanyl-tRNA synthetase [Riemerella anatipestifer RA-GD]
          Length = 322

 Score = 46.3 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 26/127 (20%), Positives = 43/127 (33%), Gaps = 19/127 (14%)

Query: 144 IGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQW 203
           +  FF   R+    S + +  R   ++   F Y +L A D +     YD  +   G DQ 
Sbjct: 95  LSCFFPYQRLTLAHSFKDKADRLADVNAGLFTYPVLMAADILL----YDAEIVPVGKDQL 150

Query: 204 GNIICGIDLGERLKTPKLFALTSPL-----------LTTASGTKMGKTLSG--AIWLNKE 250
            ++    D+G R         T  L           +    G KM K+      I+L ++
Sbjct: 151 QHLEMARDMGARFNN--QMGETFVLPQEELQENTKYVPGTDGNKMSKSRGNIINIFLPEK 208

Query: 251 MTSPYNF 257
                  
Sbjct: 209 QLKKQVM 215


>gi|291320286|ref|YP_003515548.1| tryptophanyl tRNA synthetase [Mycoplasma agalactiae]
 gi|290752619|emb|CBH40592.1| Tryptophanyl tRNA synthetase [Mycoplasma agalactiae]
          Length = 331

 Score = 46.3 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 56/342 (16%), Positives = 111/342 (32%), Gaps = 56/342 (16%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   T   L  G+    +  F   +  ++    +    S+             M   + +
Sbjct: 8   GIKPTGD-LTLGNYIGAIKNFVKLQDEYEAYYFVADLHSL------------TMGDNDAK 54

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLS-FESV 159
           E  ++ K I ++++  G       +              LL    +   ++RM    +  
Sbjct: 55  ELEKRRKEIVATYLACGLDPNKCTIFYQSDIYEHTLVQWLLTCETTMGELSRMTQYKDKS 114

Query: 160 RSRLKREQS---LSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL 216
           +S LK+      +    F Y +L A D +     YD      G DQ  ++     L ER+
Sbjct: 115 QSALKQANGTEKIPVGLFMYPVLMASDILI----YDADFVPIGDDQVQHLELTRMLAERI 170

Query: 217 KTPKLFALTSPL-LTTASGT----------KMGKTL---SGAIWLNKEMTSPYNFWQYWR 262
                  L  P  +    G           KM K+     G I+LN +   P   ++   
Sbjct: 171 NKKYQLDLKIPTGIIPKEGARIKSLSDPTAKMSKSEKTSKGTIYLNDD---PEVAYKKIM 227

Query: 263 -NIDDAD--------------VVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
            ++ D++              +++    LT + +  I+   K +     E K  +AT + 
Sbjct: 228 KSVTDSENKVYISNDKPGILNLLNIYAALTNISL--IEAETKFKDSNYAEFKTAVATVVK 285

Query: 308 -TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSR 348
             ++  + + E+A                     I+K  +S+
Sbjct: 286 NELIKIQAKYEEAYKIVDSVTKTGAQKAKEICAPITKKILSK 327


>gi|288801457|ref|ZP_06406910.1| ribosomal large subunit pseudouridine synthase B [Prevotella sp.
           oral taxon 299 str. F0039]
 gi|288331668|gb|EFC70153.1| ribosomal large subunit pseudouridine synthase B [Prevotella sp.
           oral taxon 299 str. F0039]
          Length = 479

 Score = 46.3 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 13/67 (19%), Positives = 32/67 (47%), Gaps = 1/67 (1%)

Query: 349 GMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGK 408
            + L   +  AG   S  EA  ++++ ++ +N  +++    ++   D    G+  +S  K
Sbjct: 243 PVRLNKFLANAGVC-SRREADEYIQAGSVTVNGQVVTELGTKVMRTDEVKFGDNLVSLEK 301

Query: 409 KNHIICH 415
           K +I+ +
Sbjct: 302 KVYILIN 308


>gi|229545254|ref|ZP_04433979.1| tryptophanyl-tRNA synthetase II [Enterococcus faecalis TX1322]
 gi|229549492|ref|ZP_04438217.1| tryptophanyl-tRNA synthetase II [Enterococcus faecalis ATCC 29200]
 gi|255972194|ref|ZP_05422780.1| tryptophanyl-tRNA synthetase [Enterococcus faecalis T1]
 gi|255975307|ref|ZP_05425893.1| tryptophanyl-tRNA synthetase [Enterococcus faecalis T2]
 gi|256853678|ref|ZP_05559043.1| tryptophanyl-tRNA synthetase II [Enterococcus faecalis T8]
 gi|256956617|ref|ZP_05560788.1| tryptophanyl-tRNA synthetase [Enterococcus faecalis DS5]
 gi|256961354|ref|ZP_05565525.1| tryptophanyl-tRNA synthetase [Enterococcus faecalis Merz96]
 gi|257084695|ref|ZP_05579056.1| tryptophanyl-tRNA synthetase [Enterococcus faecalis Fly1]
 gi|257087360|ref|ZP_05581721.1| tryptophanyl-tRNA synthetase [Enterococcus faecalis D6]
 gi|257090495|ref|ZP_05584856.1| tryptophanyl-tRNA synthetase [Enterococcus faecalis CH188]
 gi|293383642|ref|ZP_06629551.1| tryptophan--tRNA ligase [Enterococcus faecalis R712]
 gi|293387247|ref|ZP_06631804.1| tryptophan--tRNA ligase [Enterococcus faecalis S613]
 gi|300860543|ref|ZP_07106630.1| tryptophan--tRNA ligase [Enterococcus faecalis TUSoD Ef11]
 gi|307285209|ref|ZP_07565355.1| tryptophan--tRNA ligase [Enterococcus faecalis TX0860]
 gi|307291007|ref|ZP_07570894.1| tryptophan--tRNA ligase [Enterococcus faecalis TX0411]
 gi|312899768|ref|ZP_07759087.1| tryptophan--tRNA ligase [Enterococcus faecalis TX0470]
 gi|312903755|ref|ZP_07762929.1| tryptophan--tRNA ligase [Enterococcus faecalis TX0635]
 gi|312906191|ref|ZP_07765203.1| tryptophan--tRNA ligase [Enterococcus faecalis DAPTO 512]
 gi|312909536|ref|ZP_07768391.1| tryptophan--tRNA ligase [Enterococcus faecalis DAPTO 516]
 gi|312953374|ref|ZP_07772214.1| tryptophan--tRNA ligase [Enterococcus faecalis TX0102]
 gi|229305407|gb|EEN71403.1| tryptophanyl-tRNA synthetase II [Enterococcus faecalis ATCC 29200]
 gi|229309604|gb|EEN75591.1| tryptophanyl-tRNA synthetase II [Enterococcus faecalis TX1322]
 gi|255963212|gb|EET95688.1| tryptophanyl-tRNA synthetase [Enterococcus faecalis T1]
 gi|255968179|gb|EET98801.1| tryptophanyl-tRNA synthetase [Enterococcus faecalis T2]
 gi|256710621|gb|EEU25664.1| tryptophanyl-tRNA synthetase II [Enterococcus faecalis T8]
 gi|256947113|gb|EEU63745.1| tryptophanyl-tRNA synthetase [Enterococcus faecalis DS5]
 gi|256951850|gb|EEU68482.1| tryptophanyl-tRNA synthetase [Enterococcus faecalis Merz96]
 gi|256992725|gb|EEU80027.1| tryptophanyl-tRNA synthetase [Enterococcus faecalis Fly1]
 gi|256995390|gb|EEU82692.1| tryptophanyl-tRNA synthetase [Enterococcus faecalis D6]
 gi|256999307|gb|EEU85827.1| tryptophanyl-tRNA synthetase [Enterococcus faecalis CH188]
 gi|291078978|gb|EFE16342.1| tryptophan--tRNA ligase [Enterococcus faecalis R712]
 gi|291083284|gb|EFE20247.1| tryptophan--tRNA ligase [Enterococcus faecalis S613]
 gi|300849582|gb|EFK77332.1| tryptophan--tRNA ligase [Enterococcus faecalis TUSoD Ef11]
 gi|306497910|gb|EFM67440.1| tryptophan--tRNA ligase [Enterococcus faecalis TX0411]
 gi|306502910|gb|EFM72171.1| tryptophan--tRNA ligase [Enterococcus faecalis TX0860]
 gi|310627837|gb|EFQ11120.1| tryptophan--tRNA ligase [Enterococcus faecalis DAPTO 512]
 gi|310628583|gb|EFQ11866.1| tryptophan--tRNA ligase [Enterococcus faecalis TX0102]
 gi|310632947|gb|EFQ16230.1| tryptophan--tRNA ligase [Enterococcus faecalis TX0635]
 gi|311290209|gb|EFQ68765.1| tryptophan--tRNA ligase [Enterococcus faecalis DAPTO 516]
 gi|311293018|gb|EFQ71574.1| tryptophan--tRNA ligase [Enterococcus faecalis TX0470]
 gi|315025213|gb|EFT37145.1| tryptophan--tRNA ligase [Enterococcus faecalis TX2137]
 gi|315031027|gb|EFT42959.1| tryptophan--tRNA ligase [Enterococcus faecalis TX4000]
 gi|315032817|gb|EFT44749.1| tryptophan--tRNA ligase [Enterococcus faecalis TX0017]
 gi|315035685|gb|EFT47617.1| tryptophan--tRNA ligase [Enterococcus faecalis TX0027]
 gi|315146036|gb|EFT90052.1| tryptophan--tRNA ligase [Enterococcus faecalis TX2141]
 gi|315146616|gb|EFT90632.1| tryptophan--tRNA ligase [Enterococcus faecalis TX4244]
 gi|315152042|gb|EFT96058.1| tryptophan--tRNA ligase [Enterococcus faecalis TX0031]
 gi|315159155|gb|EFU03172.1| tryptophan--tRNA ligase [Enterococcus faecalis TX0312]
 gi|315166465|gb|EFU10482.1| tryptophan--tRNA ligase [Enterococcus faecalis TX1341]
 gi|315576584|gb|EFU88775.1| tryptophan--tRNA ligase [Enterococcus faecalis TX0630]
 gi|327535621|gb|AEA94455.1| tryptophan--tRNA ligase [Enterococcus faecalis OG1RF]
          Length = 334

 Score = 46.3 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 53/342 (15%), Positives = 100/342 (29%), Gaps = 55/342 (16%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
            T   LH GH    +      +        +     +I D      +      +++  N+
Sbjct: 10  PTGK-LHLGHYVGSLKKRVEMQADPTNQLFV-----MIADLQ--ALTDNAKNPEKVSANV 61

Query: 104 EKIKGIFSSFIKY-----GTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
                     + Y        KT   + +    L  +    L     S    N  +  E 
Sbjct: 62  ------LEVALDYLAVGLDPTKTTIFIQSQIPQLAELTMYYLNLVTTSRVRRNPTVKAEI 115

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
            + +        F  F Y + QA D       +   L   G DQ   +    ++      
Sbjct: 116 EQKKFGEGVPTGF--FIYPVSQAADITA----FQANLVPVGEDQKPMLEQAQEIVHSFNQ 169

Query: 219 PKLFALTSP----------LLTTASGT-KMGKTLSGAIWLNKEMT--SPYNFWQYW---- 261
                L  P           L    G  KM K+L   I+L+             Y     
Sbjct: 170 TYGEVLVRPEAVLPPKGMGRLPGIDGNGKMSKSLGNGIYLSDPAEVVQKKVMSMYTDPNH 229

Query: 262 RNIDD------ADVVSFAKRLTTLP--MSEIDRMAKLQGKEINEAKK----IIATEITTM 309
             I+D        V ++          + E+    +  G    + K+    ++  E+  +
Sbjct: 230 IRIEDPGQVEGNMVFTYLDVFGKEKEYIEELKEHYRHGGLGDVKIKRYLIDVLEEELAPI 289

Query: 310 VHGREEAEKAATAAME-CFDMSIHSQHMPTISISKDEVSRGM 350
              REE  K   A ME     S+ ++ +   ++++ + + G+
Sbjct: 290 RRRREELAKNPEAIMEMLHKGSLAAEKVAAQTLTEVKKAMGI 331


>gi|149177304|ref|ZP_01855909.1| tryptophanyl-tRNA synthetase [Planctomyces maris DSM 8797]
 gi|148843829|gb|EDL58187.1| tryptophanyl-tRNA synthetase [Planctomyces maris DSM 8797]
          Length = 326

 Score = 46.3 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 33/154 (21%), Positives = 51/154 (33%), Gaps = 34/154 (22%)

Query: 174 FNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPL----- 228
           F Y +L A D +     YD  L   G DQ  ++    DL +R  +  LF  T  L     
Sbjct: 122 FTYPVLMAADILL----YDSDLVPVGQDQIQHVEVTRDLAQRFNS--LFGETLILPESRV 175

Query: 229 ------LTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNI------------DDA-DV 269
                 +    G KM K+    I   +    P    +   +I             D   V
Sbjct: 176 LDTSAKVPGIDGEKMSKSYKNVI---EIFEDPKKQRKKVMSIKTDSATLEDPKNPDTCAV 232

Query: 270 VSFAKRLT-TLPMSEIDRMAKLQGKEINEAKKII 302
            +  K        +E+ +  +  G    EAK+ +
Sbjct: 233 YALYKLFANDEQQAELAQRYRAGGMGYGEAKQAV 266


>gi|91217281|ref|ZP_01254242.1| tryptophanyl-tRNA synthetase [Psychroflexus torquis ATCC 700755]
 gi|91184624|gb|EAS71006.1| tryptophanyl-tRNA synthetase [Psychroflexus torquis ATCC 700755]
          Length = 322

 Score = 46.3 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 27/118 (22%), Positives = 43/118 (36%), Gaps = 17/118 (14%)

Query: 139 DLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMG 198
           +L+  +   F   R+    S + +  R   ++   F+Y +L A D +     YD      
Sbjct: 90  ELMWYLNCMFPYQRLTLAHSFKDKSDRLSDVNAGLFSYPMLMAADILL----YDAEFIPV 145

Query: 199 GSDQWGNIICGIDLGERLKTPKLFALTSPL-----------LTTASGTKMGKTLSGAI 245
           G DQ  +I    D+ ER      +  T  L           +    G KM K+   AI
Sbjct: 146 GKDQLQHIEMTRDVAERFH--AQYGETFVLPEAKLSESSKYVLGTDGAKMSKSKGNAI 201


>gi|314918028|gb|EFS81859.1| tryptophan--tRNA ligase [Propionibacterium acnes HL050PA1]
          Length = 384

 Score = 46.3 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 42/263 (15%), Positives = 75/263 (28%), Gaps = 35/263 (13%)

Query: 22  SNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSI 80
           S+  E D+           G   T  SLH GH    +     LQ  G +   ++     +
Sbjct: 43  SDKVEADLAVHPDKWRILTGDRPTG-SLHIGHYFGSLANRVRLQSKGIESFLVVADY-QV 100

Query: 81  IGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDL 140
           I D     +    +++  +    + +              +    LN          +  
Sbjct: 101 IYDRDGVGD----LQANVMSNVADYLAIGIDPAFTTIFTHSALPALN-------QLLLPF 149

Query: 141 LREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGS 200
           L  +            + +      E+ +S L   + + QA D +    N    L   G 
Sbjct: 150 LSLVTDAELRRNPTVKDELA---TSERPMSGLMLTFPVHQAADILFCKAN----LVPVGR 202

Query: 201 DQWGNIICGIDLGERLKT--------------PKLFALTSPLLTTASGTKMGKTLSGAIW 246
           DQ  +I     +  R                 P+     +P +    GTKM K+   AI 
Sbjct: 203 DQLPHIEQTRVIARRFDERYGRAEASKPVFPEPEALLSATPHVLGLDGTKMSKSKGNAIE 262

Query: 247 LNKEMTSPYNFWQYWRNIDDADV 269
           L           +  +   D  +
Sbjct: 263 LGMTADQTAKLIKKAKTDADRHI 285


>gi|253681433|ref|ZP_04862230.1| tryptophan--tRNA ligase [Clostridium botulinum D str. 1873]
 gi|253561145|gb|EES90597.1| tryptophan--tRNA ligase [Clostridium botulinum D str. 1873]
          Length = 334

 Score = 46.3 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 52/306 (16%), Positives = 92/306 (30%), Gaps = 54/306 (17%)

Query: 32  SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG-HKPISLMGGGTSIIGDPSFRDES 90
            +     + G   +   L  G+    +   W++    +     +    +I      +D  
Sbjct: 4   KEQKKVIFSGIQPSGD-LTLGNYLGALK-NWVKLQDEYDCYYCIVDMHAITVKQQPKDLR 61

Query: 91  RRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD--ALMLNNETWLCSIKYIDLLREIGSFF 148
           RR +    I           + FI+         A +LN  +++  +             
Sbjct: 62  RRTLELLSIYVAAGIDPEKNTIFIQSHVPAHAEAAWILNCNSYMGELS------------ 109

Query: 149 SVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIIC 208
              RM  ++    +      +    F Y +L A D +     Y   L   G DQ  ++  
Sbjct: 110 ---RMTQYKDKSQKYGNNIGVGL--FTYPVLMAADILL----YQTDLVPVGKDQKQHLEL 160

Query: 209 GIDLGERLKTP--KLFALTSPLLTTASGT---------KMGKTLSGAIWLNKEMTSPYNF 257
             D+ ER        F +  P +  A            KM K+          M  P   
Sbjct: 161 TRDIAERFNGAYSPTFKVPEPYIPEAGAKIMDLQEPTKKMSKSSDNPNSFILIMDPPEVI 220

Query: 258 WQYW-RNIDDAD-VVSF-------AKRLTTL------PMSEIDRMAKLQGKEINEAKKII 302
            +   R + D+  VV +          +T L       + EI+   K QG    + KK +
Sbjct: 221 RKKISRAVTDSLGVVKYSDEQPGVKNLMTILSVIKGKSVEEIEEDYKGQGYA--QFKKDV 278

Query: 303 ATEITT 308
           A  I  
Sbjct: 279 AEAIVE 284


>gi|125991198|sp|Q6P7B0|SYWC_RAT RecName: Full=Tryptophanyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Tryptophan--tRNA ligase; Short=TrpRS; Contains:
           RecName: Full=T1-TrpRS; Contains: RecName: Full=T2-TrpRS
          Length = 481

 Score = 46.3 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 48/345 (13%), Positives = 107/345 (31%), Gaps = 50/345 (14%)

Query: 15  RGFIHQISN-PRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +  + LD   ++     Y G   ++ ++H GHL   +   WLQ     P+ +
Sbjct: 138 RGIFFSHRDMNQILDAYENKKPFYLYTGRGPSSEAMHLGHLVPFIFTKWLQDVFDVPLVI 197

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                         D+ + + +   +++            I  G       + ++  ++ 
Sbjct: 198 -----------QMSDDEKYLWKDLTLEQAYSYTVENAKDIIACGFDVNKTFIFSDLEYMG 246

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA-----YDFVELA 188
                   + +     + + ++F  V+       S    + ++  +QA       F ++ 
Sbjct: 247 Q--SPGFYKNV---VKIQKHVTFNQVKGIFGFTDSDCIGKISFPAVQAAPSFSNSFPKIF 301

Query: 189 K---NYDCRLQMGGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTASGTKMGKTLS 242
           +   +  C +     DQ        D+  R+  PK   L +   P L  A  TKM  +  
Sbjct: 302 RDRTDIQCLIPC-AIDQDPYFRMTRDVAPRIGHPKPALLHSTFFPALQGAQ-TKMSASDP 359

Query: 243 G-AIWLNKE----------------MTSPYNFWQYWRNIDDADVVSFAKRL--TTLPMSE 283
             +I+L                     +     Q+  N +      +          + +
Sbjct: 360 NSSIFLTDTAKQIKSKVNKHAFSGGRDTVEEHRQFGGNCEVDVSFMYLTFFLEDDDSLEQ 419

Query: 284 IDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAA-TAAMECF 327
           I +          E KK +   +  ++   +   KA     ++ F
Sbjct: 420 IRKDYTSGAMLTGELKKTLIDVLQPLIAEHQARRKAVTEETVKEF 464


>gi|315506778|ref|YP_004085665.1| tryptophanyl-tRNA synthetase [Micromonospora sp. L5]
 gi|315413397|gb|ADU11514.1| tryptophanyl-tRNA synthetase [Micromonospora sp. L5]
          Length = 352

 Score = 46.3 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 51/358 (14%), Positives = 98/358 (27%), Gaps = 77/358 (21%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGG------TSIIGDPSFRDESRRMMRSQ 97
            T   LH GH    +         ++   ++          S          +R M+   
Sbjct: 12  PTGR-LHLGHYVGSIANRVRLHQRYESFFIIADLHMLTTRNSRADIEQVAHNAREMVT-D 69

Query: 98  EIQENIEKIKGIFSSFIKYGTGKTDALMLNNE---TWLCSIKYI-DLLREIGSFFSVNRM 153
            +   +E  +  F              +  N      L  +  + ++ R+ G        
Sbjct: 70  ILAAGVEPERATFYLQSAIPEVGDLNTLFQNLITVPRLERVPSLKEMTRDAGK------- 122

Query: 154 LSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLG 213
                       E     L   Y +LQA D + +       + +G  D   ++    ++ 
Sbjct: 123 -----------DEMPYGLL--GYPVLQAADILCVK---GQVVPVG-KDNAAHVEVTREIA 165

Query: 214 ERLKT--PKLFAL------TSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNI 264
            R      ++F +       +P L    G  KM K+   AI L+ +  +     +     
Sbjct: 166 RRFNHLYGEVFPVPDMLMSETPTLVGTDGAGKMSKSKGNAIALSDDAAT---VRRKVMG- 221

Query: 265 DDADVVSFAKRLTTLPMSEIDRMAKLQGK---------EINEAKKI-IATEITTMVHGRE 314
                       T       D     +G            + A+   +         G  
Sbjct: 222 ----------MYTDPNRVRADVPGTPEGNPVFEYHDIFNPDRAQVADLKARYRAGRVGDV 271

Query: 315 EAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHL 372
           E ++A   A+  F        +  I   +       GL+  ++  G   +  E RR L
Sbjct: 272 EVKEALATALNRF--------LDPIRERRARFEAQPGLVDELIVTGTERTRAEVRRTL 321


>gi|110637412|ref|YP_677619.1| tryptophanyl-tRNA synthetase [Cytophaga hutchinsonii ATCC 33406]
 gi|110280093|gb|ABG58279.1| tryptophanyl-tRNA synthetase [Cytophaga hutchinsonii ATCC 33406]
          Length = 322

 Score = 46.3 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 17/83 (20%), Positives = 28/83 (33%), Gaps = 17/83 (20%)

Query: 174 FNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPL----- 228
           F Y +L A D +     Y+  +   G DQ  ++    D+         +  T  L     
Sbjct: 125 FVYPVLMAADILM----YNADIVPVGKDQIQHLEITRDIATAFNN--QYGETFILPKVKV 178

Query: 229 ------LTTASGTKMGKTLSGAI 245
                 +    G KM K+ +  I
Sbjct: 179 DENIMTIPGIDGQKMSKSYNNYI 201


>gi|288575067|ref|ZP_06393424.1| tryptophanyl-tRNA synthetase [Dethiosulfovibrio peptidovorans DSM
           11002]
 gi|288570808|gb|EFC92365.1| tryptophanyl-tRNA synthetase [Dethiosulfovibrio peptidovorans DSM
           11002]
          Length = 333

 Score = 46.3 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 34/245 (13%), Positives = 80/245 (32%), Gaps = 41/245 (16%)

Query: 35  VVTAYIGYDLTASSLHAGHLTQLML--LFWLQKTGHKPISLMGGGTSIIGDPS----FRD 88
            +  + G   T   LH GH+   +   +   +  G+     +    +++ D +     + 
Sbjct: 2   KLRTFSGMRPTGK-LHLGHMAGALSNWIKLQEDPGYDCFYGIVDWHAMMSDYANSSVIKG 60

Query: 89  ESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFF 148
             R ++                   +     K+   + +        ++ +L   +G   
Sbjct: 61  NCREVLLD--------------WLAVGLDPEKSTIFVQS-----HVPEHAELSLALGMVT 101

Query: 149 SVNRMLSFESVRSRLKR--EQSLSFLEFN-YMILQAYDFVELAKNYDCRLQMGGSDQWGN 205
            +  +    + + ++     + LS   F  Y +L A D + L ++    +   G DQ  +
Sbjct: 102 PLGWLQRNPTYKEQILNIQNKDLSTFGFLGYPVLMAADIL-LYRSSVVPV---GEDQSAH 157

Query: 206 IICGIDLGERLKT--PKLFALTSPLLT------TASGTKMGKTLSGAIWLNKEMTSPYNF 257
           +    ++  R      ++F     LLT         G KM K+   +I +       +N 
Sbjct: 158 LEITREIARRFNNFYGEVFPEPDILLTPTPKVPGTDGRKMSKSYGNSINIADTEKEMWNK 217

Query: 258 WQYWR 262
            +   
Sbjct: 218 LRTMM 222


>gi|302335627|ref|YP_003800834.1| tryptophanyl-tRNA synthetase [Olsenella uli DSM 7084]
 gi|301319467|gb|ADK67954.1| tryptophanyl-tRNA synthetase [Olsenella uli DSM 7084]
          Length = 350

 Score = 46.3 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 33/215 (15%), Positives = 63/215 (29%), Gaps = 31/215 (14%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN 102
            T   LH GH    +     LQ  G +   ++                  +      +  
Sbjct: 37  PTGR-LHLGHYFGTIRERVRLQDLGVRTNVIIADYQV-------------ITDRDTTEHI 82

Query: 103 IEKIKGIFSSFIKYG-TGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
            + +  +   ++  G       +  ++     +   +  L  +                 
Sbjct: 83  ADNVCNMVMDYLACGIDPARTMIFAHSAVPAANQLMLPFLSLVTEAEMERNPTVK---AE 139

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIIC----GIDLGERLK 217
           +     +L+ L   Y + QA D   L    +      G DQ  +I            R  
Sbjct: 140 QEASGHALTGLLLTYPVHQACD--ILFCKGNIV--PVGRDQLPHIEITSKIAQRFNRRYG 195

Query: 218 T--PKLFAL--TSPLLTTASGTKMGKTLSGAIWLN 248
              P++  L  ++PLL    G KM K+   AI ++
Sbjct: 196 RVFPEVTGLLTSTPLLPGLDGRKMSKSYGNAISIS 230


>gi|256617197|ref|ZP_05474043.1| tryptophanyl-tRNA synthetase [Enterococcus faecalis ATCC 4200]
 gi|256963505|ref|ZP_05567676.1| tryptophanyl-tRNA synthetase [Enterococcus faecalis HIP11704]
 gi|257416542|ref|ZP_05593536.1| tryptophanyl-tRNA synthetase [Enterococcus faecalis AR01/DG]
 gi|307271444|ref|ZP_07552716.1| tryptophan--tRNA ligase [Enterococcus faecalis TX0855]
 gi|307277241|ref|ZP_07558345.1| tryptophan--tRNA ligase [Enterococcus faecalis TX2134]
 gi|256596724|gb|EEU15900.1| tryptophanyl-tRNA synthetase [Enterococcus faecalis ATCC 4200]
 gi|256954001|gb|EEU70633.1| tryptophanyl-tRNA synthetase [Enterococcus faecalis HIP11704]
 gi|257158370|gb|EEU88330.1| tryptophanyl-tRNA synthetase [Enterococcus faecalis ARO1/DG]
 gi|306506171|gb|EFM75337.1| tryptophan--tRNA ligase [Enterococcus faecalis TX2134]
 gi|306511716|gb|EFM80714.1| tryptophan--tRNA ligase [Enterococcus faecalis TX0855]
 gi|315170368|gb|EFU14385.1| tryptophan--tRNA ligase [Enterococcus faecalis TX1342]
 gi|323481293|gb|ADX80732.1| tryptophanyl-tRNA synthetase [Enterococcus faecalis 62]
          Length = 334

 Score = 46.3 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 53/342 (15%), Positives = 100/342 (29%), Gaps = 55/342 (16%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
            T   LH GH    +      +        +     +I D      +      +++  N+
Sbjct: 10  PTGK-LHLGHYVGSLKKRVEMQADPTNQLFV-----MIADLQ--ALTDNAKNPEKVSANV 61

Query: 104 EKIKGIFSSFIKY-----GTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
                     + Y        KT   + +    L  +    L     S    N  +  E 
Sbjct: 62  ------LEVALDYLAVGLDPTKTTIFIQSQIPQLAELTMYYLNLVTTSRVRRNPTVKAEI 115

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
            + +        F  F Y + QA D       +   L   G DQ   +    ++      
Sbjct: 116 EQKKFGEGVPTGF--FIYPVSQAADITA----FQANLVPVGEDQKPMLEQAQEIVHSFNQ 169

Query: 219 PKLFALTSP----------LLTTASGT-KMGKTLSGAIWLNKEMT--SPYNFWQYW---- 261
                L  P           L    G  KM K+L   I+L+             Y     
Sbjct: 170 TYGEVLVRPEAVLPPKGMGRLPGIDGNGKMSKSLGNGIYLSDPAEVVQKKVMSMYTDPNH 229

Query: 262 RNIDD------ADVVSFAKRL--TTLPMSEIDRMAKLQGKEINEAKK----IIATEITTM 309
             I+D        V ++          + E+    +  G    + K+    ++  E+  +
Sbjct: 230 IRIEDPGQVEGNMVFTYLDVFGKNKEYIEELKEHYRHGGLGDVKIKRYLIDVLEEELAPI 289

Query: 310 VHGREEAEKAATAAME-CFDMSIHSQHMPTISISKDEVSRGM 350
              REE  K   A ME     S+ ++ +   ++++ + + G+
Sbjct: 290 RRRREELAKNPEAIMEMLHKGSLAAEKVAAQTLTEVKKAMGI 331


>gi|160944264|ref|ZP_02091493.1| hypothetical protein FAEPRAM212_01773 [Faecalibacterium prausnitzii
           M21/2]
 gi|158444446|gb|EDP21450.1| hypothetical protein FAEPRAM212_01773 [Faecalibacterium prausnitzii
           M21/2]
          Length = 71

 Score = 46.3 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 9/36 (25%), Positives = 19/36 (52%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIIS 385
           + L  L+  AG   +  EA+  ++  A+K+N  + +
Sbjct: 11  IKLDALLKFAGLCETGGEAKELVQGGAVKVNGEVCT 46


>gi|332878095|ref|ZP_08445825.1| tryptophan--tRNA ligase [Capnocytophaga sp. oral taxon 329 str.
           F0087]
 gi|332684057|gb|EGJ56924.1| tryptophan--tRNA ligase [Capnocytophaga sp. oral taxon 329 str.
           F0087]
          Length = 364

 Score = 46.3 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 52/355 (14%), Positives = 98/355 (27%), Gaps = 62/355 (17%)

Query: 44  LTASSLHAGHLTQLMLLFW---LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH      L     LQ +G      +    +     +  +  +      E+ 
Sbjct: 13  PTGK-LHIGHYVG--SLRRRVELQNSGQFDKIFIFEADAQALTDNIDNPEKVRQNVIEVA 69

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
            +                 K+   + +    LC + +   +  +              ++
Sbjct: 70  LDYLACG--------IDPAKSTIFIQSQIPELCELSFY-FMDLVSVSRLQRNPTVKTEIQ 120

Query: 161 SR-LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQ------------WGNII 207
            R  +    + F  F Y I QA D           + +G  DQ              N I
Sbjct: 121 MRNFEASIPVGF--FTYPISQAADITAFKA---TTVPVG-EDQEPMLEQAREIVRRFNYI 174

Query: 208 CGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYW------ 261
            G  L E        A    L  T    KM K+L   I+L+          +        
Sbjct: 175 YGDTLVEPNILLPENAACLRLPGTDGKAKMSKSLGNCIYLSDSADEVEKKIRTMYTDPNH 234

Query: 262 RNIDD------ADVVSFAKRLT-----------TLPMSEIDRMAKLQGKEINEAKKIIA- 303
             + D        V ++    +              + E+    +  G    + KK +A 
Sbjct: 235 LKVSDPGQVEGNTVFTYLDAFSRPEHFGRYLPDYADLEELKAHYRRGGLGDVKVKKFLAA 294

Query: 304 ---TEITTMVHGREEAEKAATAAMECFDMS-IHSQHMPTISISKDEVSRGMGLLT 354
               E+  +   R+E E+   A  E        ++ +   ++S+   +  +    
Sbjct: 295 VMQEELEPIRQRRKEFEQDIPAVYEMLKKGCEAARAVAADTLSEVRKAMKINYFD 349


>gi|257082079|ref|ZP_05576440.1| tryptophanyl-tRNA synthetase [Enterococcus faecalis E1Sol]
 gi|256990109|gb|EEU77411.1| tryptophanyl-tRNA synthetase [Enterococcus faecalis E1Sol]
          Length = 334

 Score = 46.3 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 53/342 (15%), Positives = 100/342 (29%), Gaps = 55/342 (16%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
            T   LH GH    +      +        +     +I D      +      +++  N+
Sbjct: 10  PTGK-LHLGHYVGSLKKRVEMQADPTNQLFV-----MIADLQ--ALTDNAKNPEKVSANV 61

Query: 104 EKIKGIFSSFIKY-----GTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
                     + Y        KT   + +    L  +    L     S    N  +  E 
Sbjct: 62  ------LEVALDYLAVGLDPTKTTIFIQSQIPQLAELTMYYLNLVTTSRVRRNPTVKAEI 115

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
            + +        F  F Y + QA D       +   L   G DQ   +    ++      
Sbjct: 116 EQKKFGEGVPTGF--FIYPVSQAADITA----FQANLVPVGEDQKPMLEQAQEIVHSFNQ 169

Query: 219 PKLFALTSP----------LLTTASGT-KMGKTLSGAIWLNKEMT--SPYNFWQYW---- 261
                L  P           L    G  KM K+L   I+L+             Y     
Sbjct: 170 TYGEVLVRPEAVLPPKGMGRLPGIDGNGKMSKSLGNGIYLSDPAEVVQKKVMSMYTDPNH 229

Query: 262 RNIDD------ADVVSFAKRL--TTLPMSEIDRMAKLQGKEINEAKK----IIATEITTM 309
             I+D        V ++          + E+    +  G    + K+    ++  E+  +
Sbjct: 230 IRIEDPGQVEGNMVFTYLDVFGKNKEYIEELKEHYRHGGLGDVKIKRYLIEVLEEELAPI 289

Query: 310 VHGREEAEKAATAAME-CFDMSIHSQHMPTISISKDEVSRGM 350
              REE  K   A ME     S+ ++ +   ++++ + + G+
Sbjct: 290 RRRREELAKNPEAIMEMLHKGSLAAEKVAAQTLTEVKKAMGI 331


>gi|295103716|emb|CBL01260.1| Uncharacterized conserved protein [Faecalibacterium prausnitzii
           SL3/3]
          Length = 71

 Score = 46.0 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 10/48 (20%), Positives = 22/48 (45%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
           + L  L+  AG   +  EA+  ++  A+K+N  + +    + +  D  
Sbjct: 11  IKLDALLKFAGLCETGGEAKELVQGGAVKVNGEVCTMRGKKCRAGDII 58


>gi|260830629|ref|XP_002610263.1| hypothetical protein BRAFLDRAFT_115431 [Branchiostoma floridae]
 gi|229295627|gb|EEN66273.1| hypothetical protein BRAFLDRAFT_115431 [Branchiostoma floridae]
          Length = 417

 Score = 46.0 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 45/240 (18%), Positives = 74/240 (30%), Gaps = 28/240 (11%)

Query: 12  LSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           L  RG I    +    LD          Y G   ++ ++H GHL   M+  WLQ     P
Sbjct: 78  LLTRGMIFSHRDVNLILDAYEKGKPFFLYTGRGPSSEAMHVGHLIPFMITKWLQDIFDVP 137

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           + +               E  R + S+  ++ I     +  +FI                
Sbjct: 138 LVIQLTDDEKFLWKDLTAEEARRLASENAKDIIALGFDVDKTFIFSDMDYIG-------- 189

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA--------Y 182
                   D  R +     + + ++F  V+       S    + ++  +QA         
Sbjct: 190 -----SSPDFYRTMLK---IQKCVTFNQVKGIFGFGDSTCIGKISFPSIQAAPSFSSSFP 241

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG--TKMGKT 240
                 K+  C +     DQ        D+  RL  PK   L +  L    G  TKM  +
Sbjct: 242 QIFGGRKDIQCLIPC-AIDQDPYFRMTRDVAPRLGFPKPALLHTTFLPALQGAMTKMSAS 300


>gi|295093587|emb|CBK82678.1| tryptophanyl-tRNA synthetase [Coprococcus sp. ART55/1]
          Length = 353

 Score = 46.0 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 37/233 (15%), Positives = 74/233 (31%), Gaps = 29/233 (12%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGH--KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +     LQ +G   +   ++    ++  +    ++ R+ +    + 
Sbjct: 11  PTGR-LHVGHYVGSLKRRVDLQNSGKYDEIYIMVADAQALTDNAEHPEKVRQNIMQVALD 69

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
                I             K+   + +    L  + +  +     +    N  +  E   
Sbjct: 70  YLACGI----------DPEKSTIFIQSMVPELTELTFYYMNLVTVARVQRNPTVKAEIKM 119

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRL---QMGGSDQ------WGNIICGID 211
              +    + F  F Y I QA D     K  +  +   QM   +Q        N + G  
Sbjct: 120 RNFEASIPVGF--FCYPISQAADITA-FKATEVPVGEDQMPMIEQCKEIVHKFNSVYGET 176

Query: 212 LGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNI 264
           L +             L  T    KM K+L   I+L+++   P +  +   ++
Sbjct: 177 LVDPKIVLPDNEACLRLPGTDGKAKMSKSLGNCIYLSED---PADIKKKVMSM 226


>gi|221118617|ref|XP_002158432.1| PREDICTED: similar to predicted protein [Hydra magnipapillata]
          Length = 583

 Score = 46.0 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 37/231 (16%), Positives = 72/231 (31%), Gaps = 28/231 (12%)

Query: 18  IHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGG 77
           + ++     +  + S+  +  Y G   T    H  +   ++ +    K+G +   L    
Sbjct: 70  LQEVIGVDRMQAIISERPLRLYWGTATTGKP-HIAYFVPMIKIADFLKSGCEVTILFADL 128

Query: 78  TSII---GDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCS 134
            + +     P    + R       I+  +  I       +K+  G            L  
Sbjct: 129 HAYLDNLKAPWELLKLRTEYYQAVIKAMLLSINVPLEK-LKFVKGTDYQ--------LSR 179

Query: 135 IKYIDLLREIGSFFSVNRMLSFESVRSR----LKREQSLSFLEFNYMILQAYDFVELAKN 190
              +D+       F ++ + +    +      +K+ Q  +     Y  LQA D   L   
Sbjct: 180 EYVLDV-------FKLSTIATEHDCKKAGCEVVKQVQHPALSGLLYPGLQALDEEYLN-- 230

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
                Q GG DQ             L   K   L +P++   +G KM  + 
Sbjct: 231 --VDAQFGGVDQRKIFTFAEKYLPMLGYKKRIHLMNPMVPGLTGGKMSSSE 279


>gi|206891125|ref|YP_002249526.1| tryptophanyl-tRNA synthetase [Thermodesulfovibrio yellowstonii DSM
           11347]
 gi|206743063|gb|ACI22120.1| tryptophanyl-tRNA synthetase [Thermodesulfovibrio yellowstonii DSM
           11347]
          Length = 328

 Score = 46.0 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 34/225 (15%), Positives = 77/225 (34%), Gaps = 38/225 (16%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGG---TSIIGDPSFRDESRRMMRSQ 97
           G   +   LH G+L   +  +   +T ++    +      T+  G+PS            
Sbjct: 7   GMQPSGP-LHLGNLIGALSNWVKIQTQYECYFFVADWHALTTGYGNPS------------ 53

Query: 98  EIQENIEKIKGIFSSFIK--YGTGKTDALMLNNETWLCSIK-YIDLLREIGSFFSVNRML 154
              +  E    +  +FI       K+   + +       +  ++ ++  +G    V    
Sbjct: 54  ---QIKEYTVDLLMNFISAGLDPEKSTIFIQSQVPEHAELHIFLSMITPLGWLERVPTYK 110

Query: 155 SFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
                + ++K +   ++    Y +LQ  D + + +     +   G DQ  ++    ++  
Sbjct: 111 EK---KEQIKDKDLDTYGFLGYPVLQTAD-IIIYRAKYVPV---GVDQVPHLEISREIAR 163

Query: 215 RLK---------TPKLFALTSPLLTTASGTKMGKTLSGAIWLNKE 250
           R            P+      P +    G KM K+   AI+L+ +
Sbjct: 164 RFNYLYGKEFFPEPEALLTEFPKVPGVDGRKMSKSYGNAIYLSDD 208


>gi|146418096|ref|XP_001485014.1| hypothetical protein PGUG_02743 [Meyerozyma guilliermondii ATCC
           6260]
 gi|146390487|gb|EDK38645.1| hypothetical protein PGUG_02743 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 426

 Score = 46.0 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 56/335 (16%), Positives = 112/335 (33%), Gaps = 42/335 (12%)

Query: 15  RGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +  ++  L   G     Y G   ++ S+H GH+       WLQ+    P+ +
Sbjct: 77  RGVFFSERDLEKILSLYEHGEPFFLYTGRGPSSDSIHLGHMVPFEFTRWLQEVFDVPLVI 136

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                 +  D  F  +    +  ++++             I  G    +  + ++  ++ 
Sbjct: 137 -----ELTDDEKFLFK--PKLTIEDVKGFART---NAKDIIAVGFKPENTFIFSDLEYMN 186

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEF-NYMILQA-----YDFVEL 187
              Y +++R   +   +    +        +    +  L F +  I  A      D + L
Sbjct: 187 GPFYENVVR---TSRQITTSTAKAVFG--FQDSDCIGKLHFASVQIATAFPSSFPDVLGL 241

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTASGTKMGKT-LSG 243
                C +     DQ        D+ ++LK  K   + A   P L  AS TKM  +  + 
Sbjct: 242 PAKTPCLIPC-AIDQDPYFRVCRDVADKLKFTKPSLIHAKFFPALQGAS-TKMSASDTTT 299

Query: 244 AIWLN------KEMTSPYNFWQYWRNID-------DADVVSFAKRLTTLPMSEIDRMAKL 290
           +I++       K+  + Y F      I+       D D+    + L+     +       
Sbjct: 300 SIFMGDTPNQIKKKINKYAFSGGKATIEEHREVGGDPDIDVAFQYLSFFSYDDEKLQKLA 359

Query: 291 QGKEINEAKK-IIATEITTMVHGREEAEKAATAAM 324
            G    E     +  E  +++     A +A  AA+
Sbjct: 360 DGYRKGEVLSGEMKQECISVIQDFVAAYQARRAAI 394


>gi|239615534|gb|EEQ92521.1| tyrosyl-tRNA synthetase [Ajellomyces dermatitidis ER-3]
          Length = 410

 Score = 46.0 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 37/195 (18%), Positives = 57/195 (29%), Gaps = 21/195 (10%)

Query: 50  HAGHLTQLMLLFWLQKTGHKPISLMGGGTSII---GDPSFRDESRRMMRSQEIQENIEKI 106
           H G+   ++ L    + G     L+      +     P      R       I   +E I
Sbjct: 65  HCGYFCPVVKLAHFLRAGCHVKILLADIHGFLDNLKAPIDLVNFRAKYYRYVITALLEAI 124

Query: 107 KGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSV-NRMLSFESVRSRLKR 165
                                    L     +DL R          +    E V+     
Sbjct: 125 HVPIDKLEFVLGSDFQ---------LSPKYTMDLFRLSSVVTEHDAKKAGAEVVKQ--VD 173

Query: 166 EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALT 225
              LS L   Y ++QA D   L    D   Q GG DQ       ++   R+   +   L 
Sbjct: 174 NAPLSGL--IYPLMQALDEEHL----DVDAQFGGVDQRKIFTLALETLPRIGYKERAHLM 227

Query: 226 SPLLTTASGTKMGKT 240
           SP++   +G KM  +
Sbjct: 228 SPMVPGLAGGKMSAS 242


>gi|310794820|gb|EFQ30281.1| tRNA synthetase class I [Glomerella graminicola M1.001]
          Length = 399

 Score = 46.0 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 35/230 (15%), Positives = 77/230 (33%), Gaps = 27/230 (11%)

Query: 18  IHQISNPRELDILCSQGV-VTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGG 76
           + ++ NP  ++ + ++G     Y G   T    H G+    + L      G +   L+  
Sbjct: 18  LAEVMNPEIIEKILAEGRNPKIYWGTATTGRP-HCGYFVPAIKLAQFLAAGCELTVLLAD 76

Query: 77  GTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIK 136
               + +         +   ++  +  +       + +   T K   ++ ++       K
Sbjct: 77  IHGFLDNLKA-----PIELVEQRAKFYKFAITNILNAVGVSTEKLKFVLGSSYQ-----K 126

Query: 137 YIDLLREIGSFFSV-----NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
             + + ++    S+      +    E V+        +S L   Y +LQ  D   L    
Sbjct: 127 SPEYIMDVYKMSSLISERDAKKAGAEVVKQ--SDNAPMSGL--LYPVLQVCDEEHL---- 178

Query: 192 DCRLQMGGSDQWGNIICGID-LGERLKTPKLFALTSPLLTTASGTKMGKT 240
               Q GG DQ        + L +     +   L +P++   +G KM  +
Sbjct: 179 GVDAQFGGMDQRKLFAAATEWLPKVGYQVRAH-LLNPMVPGLNGGKMSSS 227


>gi|269864517|ref|XP_002651601.1| tryptophanyl-tRNA synthetase [Enterocytozoon bieneusi H348]
 gi|220064223|gb|EED42455.1| tryptophanyl-tRNA synthetase [Enterocytozoon bieneusi H348]
          Length = 375

 Score = 46.0 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 50/293 (17%), Positives = 95/293 (32%), Gaps = 41/293 (13%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSF 86
           L+++ ++     Y G   ++SS+H GH    +L  +LQ   + P+ +             
Sbjct: 72  LEVIKTKKPFYIYTGRGPSSSSMHLGHTIPFLLCKYLQDVFNCPLVI-----------QI 120

Query: 87  RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGS 146
            D+ + + +   + + I+         I  G       + +N     S+   + LR I  
Sbjct: 121 TDDEKFIFKDMSLDDAIKYGIENIKDIIALGFNPKLTYIFSNYN-SSSLFEYNTLR-ISK 178

Query: 147 FFSVNRMLSFESVRSRLKREQSL---SFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQW 203
             ++N  L        L     +      E       ++ F  L K+    +     DQ 
Sbjct: 179 AINLNEALK--IFGFNLTSNIGMIQFPAKEIAPAFPTSFPF--LDKDAFVLIPS-AVDQD 233

Query: 204 GNIICGIDLGERLKTPKLFALTSPLLTTASG--TKMGKT-LSGAIWLNKEMTSPYNFWQY 260
                  D    L   K   L   LL +  G   KM  +  + +I+L+       N  + 
Sbjct: 234 PFFRLARDKANSLNEKKPTTLYVDLLPSLKGIDKKMSASDATTSIYLSDTPQDIENKIKK 293

Query: 261 ----------------WRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE 297
                             NI       + K        E++R+ +L  KE ++
Sbjct: 294 HAFSGGQPTKELQEKLGANIHVDVSYQYLKFF-LEDDDELNRIGQLYSKENHD 345


>gi|300780071|ref|ZP_07089927.1| S4 domain protein [Corynebacterium genitalium ATCC 33030]
 gi|300534181|gb|EFK55240.1| S4 domain protein [Corynebacterium genitalium ATCC 33030]
          Length = 90

 Score = 46.0 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 7/47 (14%), Positives = 19/47 (40%)

Query: 349 GMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
            + L   +  A    S  EA+  + +  + +N  ++++    +   D
Sbjct: 4   PIKLGQFLKLANLVESGGEAKELIATGEVAVNGEVVTSRGFSLDDGD 50


>gi|239816995|ref|YP_002945905.1| tryptophanyl-tRNA synthetase [Variovorax paradoxus S110]
 gi|239803572|gb|ACS20639.1| tryptophanyl-tRNA synthetase [Variovorax paradoxus S110]
          Length = 443

 Score = 46.0 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 21/96 (21%), Positives = 31/96 (32%), Gaps = 17/96 (17%)

Query: 174 FNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSP------ 227
           F Y +L   D + +   +   +   G DQ  +I    D+ +R         T P      
Sbjct: 140 FMYPVLMGADIL-MFNAHKVPV---GRDQVQHIEMARDMAQRFNHQYGEHFTLPEAEIDD 195

Query: 228 ---LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQY 260
               L    G KM K+    I     M +P    Q 
Sbjct: 196 AVATLPGLDGRKMSKSYGNTIA----MFAPRAQLQK 227


>gi|220917360|ref|YP_002492664.1| tryptophanyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-1]
 gi|219955214|gb|ACL65598.1| tryptophanyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-1]
          Length = 330

 Score = 46.0 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 38/221 (17%), Positives = 67/221 (30%), Gaps = 33/221 (14%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKT--GHKPISLMGGGTSIIGDPSFRDESRRMMRSQE 98
           G   T   LH GHL     L    K    ++         ++  +       ++  R   
Sbjct: 11  GMRPTGR-LHLGHLHG--ALANWVKLQDDNECFYFSADWHALTTNYHDTSVIKQAEREMF 67

Query: 99  IQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSV-NRMLSFE 157
           +      I    S+       K  A +            + ++  +G            E
Sbjct: 68  VDFIAAGIDPSRSTLFIQSRVKQHAEL---------NLLLGMITPLGWLERSPTYKEQRE 118

Query: 158 SVRSRLKREQSLSFLEFN-YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL 216
           ++  R      L+   F  Y +L   D + L K     +   G DQ  ++    ++  + 
Sbjct: 119 NITDR-----DLALYGFLGYPVLMTAD-IILYKATRVPV---GVDQVPHLELSREIVRKF 169

Query: 217 KT--PKLFALTSPLLT------TASGTKMGKTLSGAIWLNK 249
                ++F    PLLT         G KM K+    I L +
Sbjct: 170 NFHYGEVFPEPQPLLTAAPKILGTDGRKMSKSYGNTIDLGE 210


>gi|302691502|ref|XP_003035430.1| hypothetical protein SCHCODRAFT_81523 [Schizophyllum commune H4-8]
 gi|300109126|gb|EFJ00528.1| hypothetical protein SCHCODRAFT_81523 [Schizophyllum commune H4-8]
          Length = 437

 Score = 46.0 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 25/144 (17%), Positives = 51/144 (35%), Gaps = 14/144 (9%)

Query: 11  ILSERGFIHQISN-PRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
           IL  RG      +  + LD          Y G   ++ S+H GH+   +   W+Q     
Sbjct: 91  ILLRRGTFFSHRDFSQILDRYEQGKPFFLYTGRGPSSDSMHLGHMIPFVFTKWMQDVFDV 150

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSS-FIKYGTGKTDALMLNN 128
           P+ +              D+ + + + Q   E +++     +   I  G       + +N
Sbjct: 151 PLVV-----------QLTDDEKFLFKHQLKVEQVKEFSRQNAKDIIAVGFDLNKTFIFSN 199

Query: 129 ETWLCSIKYIDLLREIGSFFSVNR 152
             ++    Y ++ R I    + N+
Sbjct: 200 YAYMNGAFYENVSR-ISRQITYNQ 222


>gi|329119092|ref|ZP_08247784.1| tryptophan--tRNA ligase [Neisseria bacilliformis ATCC BAA-1200]
 gi|327464831|gb|EGF11124.1| tryptophan--tRNA ligase [Neisseria bacilliformis ATCC BAA-1200]
          Length = 336

 Score = 46.0 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 39/224 (17%), Positives = 67/224 (29%), Gaps = 51/224 (22%)

Query: 166 EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALT 225
           +  +    ++Y IL   D +      +  +   G DQ  ++    D+  R         T
Sbjct: 128 DHGVEMGLYSYPILMTADILMFNAQ-EVPV---GRDQIQHVEMARDIAGRFNHRFGELFT 183

Query: 226 SP---------LLTTASGTKMGKTLSGAI-WLNKEMTSPYNFWQYWRNI--------DDA 267
            P         LL    G KM K+    I   + E     +  +   N+         D 
Sbjct: 184 LPEVKIDEQVELLVGLDGRKMSKSYGNTIPLFDTEKKLQKSVNKIITNLKEPGEPKQPDE 243

Query: 268 DVVSFAKRLTTLPMSEIDRMAKL--QGKEINEAKKIIATEITTMVHGREEAEKAATAAME 325
             + F          E D   ++   G    EAKK++A +I                  E
Sbjct: 244 SPL-FEIYKAFATPDETDEFTRMLADGLAWGEAKKLLAAKINA----------------E 286

Query: 326 CFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEAR 369
             D       +          +    +  ++ +AG A +  EAR
Sbjct: 287 LADKRERYHEL---------TAAPAQIEDIL-QAGAAKARREAR 320


>gi|222150860|ref|YP_002560013.1| tryptophanyl-tRNA synthetase [Macrococcus caseolyticus JCSC5402]
 gi|222119982|dbj|BAH17317.1| tryptophanyl-tRNA synthetase [Macrococcus caseolyticus JCSC5402]
          Length = 330

 Score = 46.0 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 37/199 (18%), Positives = 67/199 (33%), Gaps = 37/199 (18%)

Query: 140 LLREIGSFFSVNRMLS-FESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMG 198
           +L  I S   + RM    +  + R   ++ +      Y  L A D +     Y   +   
Sbjct: 92  MLTTISSIGELERMTQYKDKAKDR---KEGIPAGLLTYPPLMAADILL----YGTNIVPV 144

Query: 199 GSDQWGNIICGIDLGERLKTPKLFALTSPLL--TTASG---------TKMGKTLSGAIWL 247
           G DQ  ++    DL ER         T P +      G          KM K+ S     
Sbjct: 145 GEDQKQHLELARDLAERFNARYNDIFTIPEIRMPKVGGRIMSLQEPTKKMSKSDSNTKGF 204

Query: 248 NKEMTSPYNFWQYWRN-IDDAD-VVSFAK--------------RLTTLPMSEIDRMAKLQ 291
              +  P    +  ++ + D+D +V + K                T   ++E++ M   +
Sbjct: 205 ISLLDPPNTVAKKIKSAVTDSDGIVKYDKENKPGISNLLSIYSIFTGKTIAELEAMY--E 262

Query: 292 GKEINEAKKIIATEITTMV 310
           GK   + K  +A  +   +
Sbjct: 263 GKGYGDFKSDLADVMVKFI 281


>gi|332308293|ref|YP_004436144.1| tryptophanyl-tRNA synthetase [Glaciecola agarilytica 4H-3-7+YE-5]
 gi|332175622|gb|AEE24876.1| tryptophanyl-tRNA synthetase [Glaciecola agarilytica 4H-3-7+YE-5]
          Length = 340

 Score = 46.0 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 38/218 (17%), Positives = 70/218 (32%), Gaps = 33/218 (15%)

Query: 45  TASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIE 104
           T   LH GH    +      +  H    L+     +         +       ++  NI 
Sbjct: 19  TGP-LHLGHYVGSLKQRVSLQDKHDQTILVADMQGL---------TDNANTPSKVSSNIL 68

Query: 105 KIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK 164
            +   + +       KT   + +    L  +          +  ++ R+    +V+S +K
Sbjct: 69  NVVADYLAVG-IDPTKTTICLQSQLPALAELTMY-----YSNLVTIARLERNPTVKSEIK 122

Query: 165 R---EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK---T 218
               E+S+      Y I QA D       ++  L   G DQ   +    ++  ++     
Sbjct: 123 SKGFERSVPAGFLTYPISQAADITA----FNATLIPVGDDQLPMLEQTNEIVRKVNSLAG 178

Query: 219 PKLFALTSPLL------TTASGT-KMGKTLSGAIWLNK 249
             +     PLL       +  G  KM KT+  AI L  
Sbjct: 179 KPVLNECRPLLSQTSRLPSTDGKNKMSKTMGNAINLGA 216


>gi|296242801|ref|YP_003650288.1| tryptophanyl-tRNA synthetase [Thermosphaera aggregans DSM 11486]
 gi|296095385|gb|ADG91336.1| tryptophanyl-tRNA synthetase [Thermosphaera aggregans DSM 11486]
          Length = 368

 Score = 46.0 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 38/234 (16%), Positives = 78/234 (33%), Gaps = 35/234 (14%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSF 86
           L+ L +   V    G+  +    H G       L + Q+ G      +    + +     
Sbjct: 57  LEDLRAGHKVAVLTGFMPSGRP-HLGTAMVYEELKFFQELGAHVKIAIADAEAYV----V 111

Query: 87  RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGS 146
           R E RR      +      I             KT+             +Y  L++    
Sbjct: 112 RREDRRTTILNGVDFIAHAIA------WGLDPEKTEFYFQT----AMKEEYYRLIQMFSK 161

Query: 147 FFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN-----YDCRLQMGGSD 201
             ++  M   E++   L   + ++       + QA D + L  +      +  + +G  D
Sbjct: 162 KITMAEM---EAIYGELSPGKIIA------SLTQAADILHLQLDSYGGFKNILVPVGA-D 211

Query: 202 QWGNIICGIDLGERLKT----PKLFALTSPLLTTASGTKMGKTLSG-AIWLNKE 250
           Q  ++    D+ +R +      +  ++   L+    G KM K+    AI L+++
Sbjct: 212 QDPHLRLTRDIADRFEGELGLKRPASIYHKLIRGLDGNKMSKSRPEFAIHLDED 265


>gi|90961200|ref|YP_535116.1| tryptophanyl-tRNA synthetase II [Lactobacillus salivarius UCC118]
 gi|227891860|ref|ZP_04009665.1| tryptophanyl-tRNA synthetase II [Lactobacillus salivarius ATCC
           11741]
 gi|90820394|gb|ABD99033.1| Tryptophanyl-tRNA synthetase [Lactobacillus salivarius UCC118]
 gi|227866323|gb|EEJ73744.1| tryptophanyl-tRNA synthetase II [Lactobacillus salivarius ATCC
           11741]
 gi|300214126|gb|ADJ78542.1| Tryptophanyl-tRNA synthetase [Lactobacillus salivarius CECT 5713]
          Length = 339

 Score = 46.0 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 40/223 (17%), Positives = 72/223 (32%), Gaps = 30/223 (13%)

Query: 44  LTASSLHAGHLTQLMLLFW-LQKTGHKPISLMGGGTSIIGDPSF-RDESRRMMRSQEIQE 101
            T   LH GH    +     +Q +G     +M      I D     D +R     ++I+ 
Sbjct: 12  PTGK-LHVGHYIGSLKKRVSMQNSGKYDSYIM------IADQQALTDNAR---DPEKIKN 61

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
           ++ ++  +    +     K+   + +    L  +    L     S    N  +  E  + 
Sbjct: 62  SLIQV-ALDYLAVGLDPKKSTIFVQSQIPALAELNLYYLNLVTVSRLERNPTVKAEIQQK 120

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--- 218
             +R     F  F Y + QA D      N    L   G DQ   +    ++     +   
Sbjct: 121 HFERSIPAGF--FTYPVSQAADITAFKAN----LVPVGDDQEPMLEQTREIVRTFNSIYG 174

Query: 219 ----PKLFALTSPL---LTTASGT-KMGKTLSGAIWLNKEMTS 253
                            L    G  KM K+L+ AI+L+ +  +
Sbjct: 175 EVLVEPQGVFAPKGSGRLPGLDGNAKMSKSLNNAIYLSDDADT 217


>gi|256824646|ref|YP_003148606.1| tryptophanyl-tRNA synthetase [Kytococcus sedentarius DSM 20547]
 gi|256688039|gb|ACV05841.1| tryptophanyl-tRNA synthetase [Kytococcus sedentarius DSM 20547]
          Length = 331

 Score = 46.0 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 44/225 (19%), Positives = 80/225 (35%), Gaps = 32/225 (14%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   T+ SLH G+    +  +   + GH+ +  +    ++             M  + ++
Sbjct: 4   GMQPTSDSLHLGNYLGALSQWGPMQDGHEALFCVVDLHAVTL----------PMDPELLR 53

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           +   +    F +       +  AL + +       +   LL  I  F   +RM  F+   
Sbjct: 54  QRTRRTAAQFMAGG--VDPERSALFVQSHV-PEHAELAWLLNCITGFGEASRMTQFKDKA 110

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
           +R +   + S   F Y +L A D +     YD  L   G DQ  ++    DL +R     
Sbjct: 111 ARQEAGNA-SVGLFTYPMLMAADILL----YDTALVPVGEDQVQHVELTRDLAQRFNHRY 165

Query: 221 LFALTSP----------LLTTASGT-KMGKTL---SGAIWLNKEM 251
             +L  P          ++     T KM K+     G IW  ++ 
Sbjct: 166 GPSLVVPEYRVTKESARVMDLQDPTSKMSKSASTDKGVIWFLEDA 210


>gi|269925805|ref|YP_003322428.1| pseudouridine synthase [Thermobaculum terrenum ATCC BAA-798]
 gi|269789465|gb|ACZ41606.1| pseudouridine synthase [Thermobaculum terrenum ATCC BAA-798]
          Length = 253

 Score = 46.0 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 12/70 (17%), Positives = 26/70 (37%), Gaps = 2/70 (2%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS-TGNIKLS 405
           +  + L  L+ + G   S   A R +    + +N  I++        +D     G +   
Sbjct: 2   NEPIRLHKLLAQMG-VASRRAAERMIAEGRVSVNGRIVNTPGAMASPEDEIRVDGKLVRQ 60

Query: 406 FGKKNHIICH 415
             K  +I+ +
Sbjct: 61  QPKMRYILLN 70


>gi|227498157|ref|ZP_03928328.1| tryptophan--tRNA ligase [Actinomyces urogenitalis DSM 15434]
 gi|226832441|gb|EEH64824.1| tryptophan--tRNA ligase [Actinomyces urogenitalis DSM 15434]
          Length = 375

 Score = 46.0 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 58/333 (17%), Positives = 96/333 (28%), Gaps = 52/333 (15%)

Query: 22  SNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL-FWLQKTGHKPISLMGGGTSI 80
           S   E D+  + G      G   T + +H GH    M     +Q  G     L+     +
Sbjct: 33  STEIEADLDVNPGRYRMLTGVRPTGN-MHLGHYFGTMHSWAKIQDRGVDTWILVADY-QV 90

Query: 81  IGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDL 140
           I D       R     + +   +     +          +   +  ++     +   +  
Sbjct: 91  ITDRDGVGPIR-----ERVLSLVADSLAVG------VDPERSTIFAHSAVPEENQLMLPF 139

Query: 141 LREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGS 200
           L  +              + +     ++++ L   Y + QA D +    N    L   G 
Sbjct: 140 LSLVTESELHRNPTVKSELEA--TDGRAMTGLMLTYPVHQAADILFCQAN----LVPVGK 193

Query: 201 DQWGNIICGI--------DLGERLKTPKLF----ALTS--PLLTTASGTKMGKTLSGAIW 246
           DQ  ++              G  +K   +F    AL S  PLL    G KM K+    I 
Sbjct: 194 DQLPHLEQARLIAQRFDKRYGRAVKEHPVFRRPEALLSEAPLLLGLDGEKMSKSRHNTIE 253

Query: 247 LNKEMTSPYNFWQYWRNIDDADVVSF--------AKRLTTLPM------SEIDRMAKLQG 292
           L           +     D   V+++        A  LT   +       EI       G
Sbjct: 254 LRMSADETAKALKKA-KTDSERVITYDPVGRPEVANLLTLASLCGAGTPEEIAERIGDGG 312

Query: 293 KEINEAKKIIATEITTMVHGREEAEKAATAAME 325
                  K + TE          A +A  AA E
Sbjct: 313 AGTL---KKVTTEAVNEFFAPIRARRAELAANE 342


>gi|329896704|ref|ZP_08271697.1| Tryptophanyl-tRNA synthetase [gamma proteobacterium IMCC3088]
 gi|328921640|gb|EGG29016.1| Tryptophanyl-tRNA synthetase [gamma proteobacterium IMCC3088]
          Length = 342

 Score = 46.0 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 32/154 (20%), Positives = 50/154 (32%), Gaps = 23/154 (14%)

Query: 168 SLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSP 227
            ++   FNY +L A D +     +   + +G  DQ  +I    D+  R        L  P
Sbjct: 136 GVTMGLFNYPVLMAADILMFKATH---VPVG-KDQIQHIEMARDIASRFNHHYGELLVLP 191

Query: 228 ---------LLTTASGTKMGKTLSGAI-WLNKEMTSPYNFWQYWRNI--------DD-AD 268
                    +L    G KM K+    I   + E     +  +   N+         D + 
Sbjct: 192 EAVVDQETDVLLGLDGRKMSKSYGNTIPLFDTEKKLKKSINKIKTNLLEPGEAKDPDTST 251

Query: 269 VVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKII 302
           V        T    +  R    QG    EAKK +
Sbjct: 252 VFQIWSAFATPSERDSMRREFEQGIAWGEAKKRL 285


>gi|302670616|ref|YP_003830576.1| tryptophanyl-tRNA synthetase TrpS [Butyrivibrio proteoclasticus
           B316]
 gi|302395089|gb|ADL33994.1| tryptophanyl-tRNA synthetase TrpS [Butyrivibrio proteoclasticus
           B316]
          Length = 364

 Score = 46.0 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 45/237 (18%), Positives = 74/237 (31%), Gaps = 37/237 (15%)

Query: 44  LTASSLHAGHLTQLMLLFW---LQKTGHKPISLMGGGTSIIGDPSF-RDESRRMMRSQEI 99
            T   LH GH      L     LQ +G      +     +I D     D +      +  
Sbjct: 11  PTGK-LHVGHYVG--SLRRRVELQNSGEFDKIFI-----MIADAQALTDNADNP--EKVR 60

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           Q  IE      S  +     K+   + +    L  + +  +     S    N  +  E  
Sbjct: 61  QNIIEVALDYLSVGLD--PAKSTLFIQSQIPELTELSFYYMNLVTVSRLQRNPTVKSEIA 118

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
               +    + F  F Y I QA D           + +G  DQ   I    ++  +  + 
Sbjct: 119 MRNFETSIPVGF--FTYPISQAADITAFKA---TTVPVG-EDQEPMIEQCKEIVRKFNSV 172

Query: 220 KLFALTSP-----------LLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNI 264
              AL  P            L    G  KM K+L   I+L++E   P +  +   ++
Sbjct: 173 YGEALVEPEILLPDNAACLRLPGIDGKAKMSKSLGNCIYLSEE---PESIKKKVMSM 226


>gi|94733606|emb|CAK04284.1| tyrosyl-tRNA synthetase [Danio rerio]
          Length = 251

 Score = 46.0 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 45/232 (19%), Positives = 72/232 (31%), Gaps = 25/232 (10%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
            L  R    ++     L  +  +  +  Y G   T    H  +   +  +    K G + 
Sbjct: 12  QLITRNL-QEVLGEERLKEILKERELKVYWGTATTGKP-HVAYFVPMSKIADFLKAGCEV 69

Query: 71  ISLMGGGTSII---GDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
             L     + +     P    E R     Q I+  +E I       +K+  G        
Sbjct: 70  TILFADLHAYLDNMKAPWELLELRVKYYEQVIKAMLESIGVPLDK-LKFVKGTDYQ---- 124

Query: 128 NETWLCSIKYIDLLREIGSFFSV--NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
               L     +D+ R + S  +    +    E V+   + E  L      Y  LQA D  
Sbjct: 125 ----LSREYTLDVYR-LSSMVTEHDAKKAGAEVVK---QVEHPL-LSGLLYPGLQALDEE 175

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKM 237
            L        Q GG DQ             L   K   L +P++   +G+KM
Sbjct: 176 YLK----VDAQFGGVDQRKIFTLAEKYLPSLGYTKRSHLMNPMVPGLTGSKM 223


>gi|145347977|ref|XP_001418435.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144578664|gb|ABO96728.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 484

 Score = 46.0 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 51/334 (15%), Positives = 102/334 (30%), Gaps = 48/334 (14%)

Query: 15  RGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG           LD          Y G   ++ SLH GHL       WLQ     P+ +
Sbjct: 67  RGMFFAHRELDLILDAYERGEKFYLYTGRGPSSESLHLGHLIPFQFTKWLQDAFKVPLVI 126

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                         D+ + + +   ++E     +      I  G       + ++  ++ 
Sbjct: 127 -----------QLTDDEKFLWKDLSLEECGRLARENAKDIIACGFDPKRTFIFSDVQYMS 175

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEF-------NYMILQAYDFVE 186
           +  Y ++++ I    ++N++            E ++  + F       ++     + F E
Sbjct: 176 TPFYKNMMK-IAKCVTLNQV--KGIFG--FTGESNIGQVGFPPTQAAPSFPDCFPHMFGE 230

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFAL---TSPLLTTASGTKMGKT-LS 242
              +  C +     DQ        D+  R+   K   +     P L   SG KM  +  +
Sbjct: 231 SKTSLRCLIPC-AIDQDPYFRMTRDVAPRIGGYKPALIESRFFPALKGESG-KMSASDAT 288

Query: 243 GAIWLN------KEMTSPYNFWQYWRNIDD----------ADVVSFAKRL--TTLPMSEI 284
            AI++       K   + Y F      ++D               +          ++EI
Sbjct: 289 SAIYVTDTPKEIKTKVNKYAFSGGQLTVEDHRRLGGNLDTDISWKWLNFFLDDDQALAEI 348

Query: 285 DRMAKLQGKEINEAKKIIATEITTMVHGREEAEK 318
                       E K  +   +  +  G ++A  
Sbjct: 349 GEEYSSGRMLSGEIKAKLIETLVPICQGHQDARA 382


>gi|163846982|ref|YP_001635026.1| tryptophanyl-tRNA synthetase [Chloroflexus aurantiacus J-10-fl]
 gi|222524803|ref|YP_002569274.1| tryptophanyl-tRNA synthetase [Chloroflexus sp. Y-400-fl]
 gi|163668271|gb|ABY34637.1| tryptophanyl-tRNA synthetase [Chloroflexus aurantiacus J-10-fl]
 gi|222448682|gb|ACM52948.1| tryptophanyl-tRNA synthetase [Chloroflexus sp. Y-400-fl]
          Length = 336

 Score = 46.0 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 51/303 (16%), Positives = 94/303 (31%), Gaps = 59/303 (19%)

Query: 34  GVVTAYIGYDLTASSLHAGHL---TQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDES 90
                + G   + + LH G+     Q  +    QKT    I  +   T     P    + 
Sbjct: 3   RKPRVFSGIQPSGN-LHIGNYLGAIQQWVAGQGQKTNFICIVDLHAITV----PQDPADL 57

Query: 91  RRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW-LCSIKYIDLLREIGSFFS 149
           RR  R          I    ++       +  A      +W    I  +  L        
Sbjct: 58  RRQTRELAALLLACGIDPQQTTLFVQSHVRAHAEC----SWVFSCITPLGWLE------- 106

Query: 150 VNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICG 209
             RM      +++ ++++S+      Y +L A D + L    +  +   G DQ  +I   
Sbjct: 107 --RMTQ---YKTKAQKQESVMTGLLTYPVLMAADIL-LYDADEVPV---GEDQKQHIELT 157

Query: 210 IDL-GER-LKTPKLFALTSPLLTTASG---------TKMGKTL---SGAIWL--NKE--- 250
            DL         + F +  P++  +            KM K+      AI +  + +   
Sbjct: 158 RDLAQRFNYLFGETFVIPKPVIRESGARIMGLNDPTVKMSKSETTRGHAIRIVDDPDEIR 217

Query: 251 ---MTSPYNFWQYWRNIDDAD------VVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKI 301
                +  + +   R  DD D      ++   + LT     EI+      GK     K+ 
Sbjct: 218 WAIKRAVTDSYNEIRFSDDPDRAGVNNLLQIYELLTGRSRPEIEAHFA--GKGYGALKRE 275

Query: 302 IAT 304
           +  
Sbjct: 276 LTE 278


>gi|291523263|emb|CBK81556.1| tryptophanyl-tRNA synthetase [Coprococcus catus GD/7]
          Length = 360

 Score = 46.0 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 43/269 (15%), Positives = 81/269 (30%), Gaps = 50/269 (18%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGH--KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +     LQ +G   K   ++    ++  +    ++ R+      + 
Sbjct: 11  PTGR-LHVGHYVGSLKRRVELQNSGEYDKVFIMIADAQALTDNADNPEKVRQ-----NVI 64

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           E                  K+   + +    LC + +  +     S    N  +  E   
Sbjct: 65  EVALDYMACG-----LDPAKSTLFIQSQIAELCELSFYYMNLVTVSRLQRNPTVKSEIQM 119

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
              +    + F  F Y I QA D           + +G  DQ   I    ++  +  +  
Sbjct: 120 RNFETSIPVGF--FTYPISQAADITAFKA---TTVPVG-EDQSPMIEQTREIVHKFNS-- 171

Query: 221 LFALTS----PLLTTA---------SGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDD 266
           ++  T      LL             G  KM K+L   I+L ++   P +  +   +   
Sbjct: 172 VYGETLVEPKILLPDNEACLRLPGIDGKAKMSKSLGNCIYLAED---PKDIKKKVMS--- 225

Query: 267 ADVVSFAKRLTTLPMSEIDRMAKLQGKEI 295
                     T      I+    L+G  +
Sbjct: 226 --------MFTDPNHIRIEDPGSLEGNTV 246


>gi|88857019|ref|ZP_01131662.1| tryptophanyl-tRNA synthetase [Pseudoalteromonas tunicata D2]
 gi|88820216|gb|EAR30028.1| tryptophanyl-tRNA synthetase [Pseudoalteromonas tunicata D2]
          Length = 351

 Score = 46.0 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 40/242 (16%), Positives = 76/242 (31%), Gaps = 39/242 (16%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
            T  SLH GH    +    L +  ++   L+     +  D  F+      + +  I   +
Sbjct: 30  PTG-SLHLGHFVGSLKQRVLLQQQYQQTILVADMQGLT-DNGFK----PTLVAANILNLV 83

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL 163
                +          KT   + +    L  +          +  +V R+    +V++ +
Sbjct: 84  ADYLAVG-----IEPSKTTICLQSALPALAELTMY-----YSNLVTVARLERNPTVKNEI 133

Query: 164 KR---EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL---- 216
                 QS+      Y I QA D           + +G  DQ   I    ++  ++    
Sbjct: 134 ANKAFGQSVPAGFLTYPISQAADITGF---MGTLVPVG-DDQLPMIEQTNEIVRKVNHIA 189

Query: 217 ------KTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYW------RNI 264
                 +   L + T  L+      KM K++   I+L  +  +     Q         NI
Sbjct: 190 GQTILVECKPLLSQTPRLVAPDGKNKMSKSMGNCIYLGSDPLAIRKAVQSMYTDPNHLNI 249

Query: 265 DD 266
            D
Sbjct: 250 SD 251


>gi|327403468|ref|YP_004344306.1| tryptophanyl-tRNA synthetase [Fluviicola taffensis DSM 16823]
 gi|327318976|gb|AEA43468.1| tryptophanyl-tRNA synthetase [Fluviicola taffensis DSM 16823]
          Length = 322

 Score = 46.0 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 50/130 (38%), Gaps = 15/130 (11%)

Query: 139 DLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMG 198
           +L+  +  +F   R+    S + +      ++   F Y IL A D +     YD  +   
Sbjct: 90  ELMWHLLCYFPFQRLTLAHSFKDKADYLADVNAGLFTYPILMAADILL----YDAEVVPV 145

Query: 199 GSDQWGNIICGIDLGERL--KTPKLFAL-------TSPLLTTASGTKMGKTLSG--AIWL 247
           G DQ  ++    D+  R   +  + F L       T+ ++    G KM K+ +    I+L
Sbjct: 146 GKDQLQHLEIARDVASRFNHQMGETFVLPDARIDETTKIIPGTDGEKMSKSRNNFINIFL 205

Query: 248 NKEMTSPYNF 257
            ++       
Sbjct: 206 PEKQLKKQVM 215


>gi|323651390|gb|ADX97541.1| tyrosyl-tRNA synthetase [Moumou virus]
          Length = 345

 Score = 46.0 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 39/228 (17%), Positives = 74/228 (32%), Gaps = 19/228 (8%)

Query: 19  HQISNPRELDILCSQGVV-TAYIGYDLTASSLHAGH-LTQLMLLFWLQKTGHKPISLMGG 76
            +   P  L+ L   G   TAY G++ +   +H    L  +M    +   G + I  +  
Sbjct: 20  EECETPDRLEELIKSGKKFTAYNGFEPSGR-IHIAQALITVMNTNEIISCGGRMIIYIAD 78

Query: 77  GTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIK 136
                       +  + M S  + +  +        F   G   ++   + +        
Sbjct: 79  L---------FAKMNKKMDSD-LDKIKDVGLYFIEVFKACGINMSETKFIWSSDLFNKNP 128

Query: 137 YIDLLR--EIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCR 194
                R  +I    S++R      +  R K    LS  +  Y  +Q  D  EL +     
Sbjct: 129 EKYFTRLLDISEETSLSRSKRCCQIMGR-KDGDELSVSQIIYPCMQVADIFEL-EPEGID 186

Query: 195 LQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG--TKMGKT 240
           +   G DQ    +  ++  ++        L+  +L    G   KM K+
Sbjct: 187 ICQLGVDQRKVNMLALEYAKKNGLKVPVILSHHMLMGLGGPKNKMSKS 234


>gi|307821960|ref|ZP_07652192.1| tryptophanyl-tRNA synthetase [Methylobacter tundripaludum SV96]
 gi|307736526|gb|EFO07371.1| tryptophanyl-tRNA synthetase [Methylobacter tundripaludum SV96]
          Length = 337

 Score = 46.0 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 38/231 (16%), Positives = 72/231 (31%), Gaps = 38/231 (16%)

Query: 50  HAGHLTQLM--LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIK 107
           H G+    +   +   +     P   +    ++I     ++  R    S EI        
Sbjct: 17  HLGNYVGAIRPAIAASKDANVTPFYFLADYHALI---KCQEPERVRQSSLEIAATW---- 69

Query: 108 GIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLS-FESVRSRLKRE 166
                 +  G   ++A+          ++   +L  + +   +NR  +   +V    +  
Sbjct: 70  ------LALGLDTSNAVFYRQSDVPEILELSWMLTCVAAKGLMNRAHAYKAAVAENEQGG 123

Query: 167 Q-----SLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKL 221
           +      ++   F+Y IL A D +    N   ++ +G  DQ  +I    DL  R      
Sbjct: 124 ENDADKGITMGLFSYPILMAADMLMFNAN---KVPVG-KDQIQHIEMARDLAGRFNHIYG 179

Query: 222 FALTSP---------LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
                P          L    G KM K+ +  I L      P    +   N
Sbjct: 180 EHFVLPEAVIEEHASTLAGLDGRKMSKSYNNTIPL----FEPEKKLRKLIN 226


>gi|307069644|ref|YP_003878121.1| putative tryptophanyl-tRNA synthetase [Candidatus Zinderia
           insecticola CARI]
 gi|306482904|gb|ADM89775.1| putative tryptophanyl-tRNA synthetase [Candidatus Zinderia
           insecticola CARI]
          Length = 326

 Score = 46.0 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 35/214 (16%), Positives = 74/214 (34%), Gaps = 30/214 (14%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   T   +H GH   ++      +     +  +    S+    + ++   ++   Q + 
Sbjct: 9   GIRPTGK-IHFGHYFGIIKKIIKLQNKFSCLFFIADLHSLSNYKNLKNI--KLNIKQILI 65

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           + +        + +   +   +   L    +L +I  I LL+ + ++  + +       +
Sbjct: 66  DCLNIGINPKKTILFIQSKVKEHKEL--YFFLSTITSIKLLKHLPNYKYLKK------CK 117

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK--- 217
             +        + F Y +LQA D +     Y+    + G DQ  NI     L  +     
Sbjct: 118 KNINN------ITFTYPLLQASDILI----YNTNKVLVGYDQIPNIEFVKKLSYKFNLKY 167

Query: 218 TPKLFALTSPLL------TTASGTKMGKTLSGAI 245
             K+F +   +L          GTKM K+    I
Sbjct: 168 KKKVFKIPKIILSNLSNVPGIDGTKMSKSNKNFI 201


>gi|224457700|ref|ZP_03666173.1| tryptophanyl-tRNA synthetase [Francisella tularensis subsp.
           tularensis MA00-2987]
          Length = 245

 Score = 46.0 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 22/93 (23%), Positives = 36/93 (38%), Gaps = 16/93 (17%)

Query: 166 EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL--------GERLK 217
           ++ ++   FNY +L A D +     +D  L   G DQ  +I    D+         + + 
Sbjct: 91  DKGITMGLFNYPVLMAADILI----FDADLVPVGKDQIQHIEIARDIANRFNHIYQKPVL 146

Query: 218 TPKLFALTS---PLLTTASGTKMGKTLSGAIWL 247
                ALTS     +    G KM K+    I +
Sbjct: 147 KAPQ-ALTSEDSQTILGLDGRKMSKSYDNTIAI 178


>gi|227549559|ref|ZP_03979608.1| RNA-binding S4 domain protein [Corynebacterium lipophiloflavum DSM
           44291]
 gi|227078323|gb|EEI16286.1| RNA-binding S4 domain protein [Corynebacterium lipophiloflavum DSM
           44291]
          Length = 95

 Score = 46.0 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 9/49 (18%), Positives = 21/49 (42%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           S  + L   +  A  A S  +A+  + S  + +N  ++++    +   D
Sbjct: 9   SDSIKLGQFLKLANLAESGGQAKELIASGEVAVNGEVVTSRGHSLGDAD 57


>gi|118463682|ref|YP_883447.1| tryptophanyl-tRNA synthetase [Mycobacterium avium 104]
 gi|254776743|ref|ZP_05218259.1| tryptophanyl-tRNA synthetase [Mycobacterium avium subsp. avium ATCC
           25291]
 gi|118164969|gb|ABK65866.1| tryptophanyl-tRNA synthetase [Mycobacterium avium 104]
          Length = 343

 Score = 46.0 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 53/308 (17%), Positives = 99/308 (32%), Gaps = 47/308 (15%)

Query: 32  SQGVVTAYIGYDLTASSLHAGHLT----QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFR 87
           + G    + G   T+ SLH G+      Q + L             +    +I       
Sbjct: 4   ATGSRRIFSGVQPTSDSLHLGNALGAISQWVTLQDDWGDDWDAFFCVVDLHAITIAQDPA 63

Query: 88  DESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSF 147
              RR + +              + ++  G     + +          +   +L     F
Sbjct: 64  ALRRRTLVTA-------------AQYLALGIDPARSTVFVQSHVPAHTQLAWVLGCFTGF 110

Query: 148 FSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNII 207
              +RM  F+    R +   S +   F Y +LQA D +     YD  L   G DQ  ++ 
Sbjct: 111 GQASRMTQFKDKSLR-QGADSTTVGLFTYPVLQAADVLA----YDTGLVPVGEDQRQHLE 165

Query: 208 CGIDLGERLKT--PKLFALTSPLLTTASGT---------KMGKTLSGAIWLNKEMTSPYN 256
              D+ +R     P  F +   L+   +           KM K+ S    L   +  P  
Sbjct: 166 LARDVAQRFNARFPDTFVVPEMLIPKVTAKIYDLADPTSKMSKSASTDAGLVNLLDDPAL 225

Query: 257 FWQYWRN-IDDAD------------VVSFAKRLTTLPMSEIDRMAK-LQGKEINEAKKII 302
             +  R+ + D++            V +     + +   +ID++ +   G+   + KK  
Sbjct: 226 SAKKIRSAVTDSEREIRFDTDAKPGVSNLLSIQSAVSGVDIDKLVQGYAGRGYGDLKKDT 285

Query: 303 ATEITTMV 310
           A  +   V
Sbjct: 286 ADAVVEFV 293


>gi|308176501|ref|YP_003915907.1| tryptophan--tRNA ligase [Arthrobacter arilaitensis Re117]
 gi|307743964|emb|CBT74936.1| tryptophan--tRNA ligase [Arthrobacter arilaitensis Re117]
          Length = 338

 Score = 46.0 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 43/249 (17%), Positives = 76/249 (30%), Gaps = 35/249 (14%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTS--IIGDPSFRDESRRMMRSQE 98
           G   +  SLH G+    ++ +   +  H+    +    +     DP+      R   +Q 
Sbjct: 11  GMQPSGDSLHLGNYLGALVNWVKTQDDHEAFFFIPDMHAITTPQDPAELRARTRKTAAQF 70

Query: 99  IQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
           I   I+  K       +       A + N  T       +   ++  S    +       
Sbjct: 71  IAGGIDLDKSTLFVQSQVPEHAQLAWVFNCITGFGEASRMTQFKDKSSKGGAD------- 123

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
                     L    F Y +L A D + L +     +   G DQ  ++    DL +R   
Sbjct: 124 -----AASVGL----FTYPVLMAADIL-LYQPEGVPV---GDDQRQHVELARDLAKRFNH 170

Query: 219 PKLFALTSP-LLTTASGT----------KMGKTLSGAIWLNKEMTSPYNFWQYWRN-IDD 266
                 T P       G           KM K+      L   +  P    +  ++ + D
Sbjct: 171 RFGQTFTVPEAFIPKEGARIYDLQNPTSKMSKSAESPAGLINVLDEPKLIAKRIKSAVTD 230

Query: 267 A-DVVSFAK 274
           A  VV++ K
Sbjct: 231 AGSVVAYDK 239


>gi|194225360|ref|XP_001488771.2| PREDICTED: similar to WARS protein [Equus caballus]
          Length = 464

 Score = 46.0 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 42/248 (16%), Positives = 83/248 (33%), Gaps = 33/248 (13%)

Query: 15  RGFIHQISN-PRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +  + LD   ++     Y G   ++ ++H GHL   +   WLQ   + P+ +
Sbjct: 129 RGIFFSHRDMNQVLDAYENKKPFYLYTGRGPSSEAMHLGHLIPFIFTKWLQDVFNVPLVI 188

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                         D+ + + +   + +            I  G       + ++  ++ 
Sbjct: 189 -----------QMTDDEKYLWKDLTLDQAYGYAVENAKDIIACGFDIKKTFIFSDLEYMG 237

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA--------YDFV 185
           S    D  R +     + + ++F  V+       S S  + ++  +QA            
Sbjct: 238 S----DFYRNV---VKIQKHVTFNQVKGIFGFTDSDSIGKISFPAIQAAPSFSNSFPQIF 290

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTASGTKMGKTLS 242
               +  C +     DQ        D+  R+  PK   L +   P L  A  TKM  +  
Sbjct: 291 RDRADIQCLIPC-AIDQDPYFRMTRDVAPRIGYPKPALLHSTFFPALQGAQ-TKMSASDP 348

Query: 243 G-AIWLNK 249
             +I+L  
Sbjct: 349 NSSIFLTD 356


>gi|329924652|ref|ZP_08279667.1| tryptophan--tRNA ligase [Paenibacillus sp. HGF5]
 gi|328940486|gb|EGG36808.1| tryptophan--tRNA ligase [Paenibacillus sp. HGF5]
          Length = 327

 Score = 46.0 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 41/247 (16%), Positives = 80/247 (32%), Gaps = 43/247 (17%)

Query: 138 IDLLREIGSFFS-VNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQ 196
           +  L E  + F  + RM      + +   + ++S   F Y +L A D + L +     + 
Sbjct: 89  LGWLLETQAHFGELKRMTQ---FKEKSDGKDTVSSALFTYPVLMAADVL-LYQATHVPV- 143

Query: 197 MGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTAS-----------GTKMGKTLSGAI 245
             G DQ  ++    D+ ER         T P                   KM K+     
Sbjct: 144 --GDDQKQHLELTRDVAERFNNRYGRTFTVPEPIIQDIGSRVMGLDDPSKKMSKSNPNKN 201

Query: 246 WLNKEMTSPYNFWQYW-RNIDDAD------------VVSFAKRLTTLPMSEIDRMAKL-Q 291
                M +P +  + + R + D+D            V +  +  +      I  + K  +
Sbjct: 202 SCVHMMDTPEDIRKKFSRAVTDSDGQVRHDWEHKPAVSNLIEIYSVFSEEAISVIEKRYE 261

Query: 292 GKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMG 351
           G+     KK +A  +   +              E F   ++S  +  I +   + +    
Sbjct: 262 GQGYGTFKKELAEVVIEKL----------QPIQERFHQIVNSSELDRILMDGAKRASDTA 311

Query: 352 LLTLIVK 358
           + TL+  
Sbjct: 312 VPTLLAA 318


>gi|254521519|ref|ZP_05133574.1| tryptophanyl-tRNA synthetase [Stenotrophomonas sp. SKA14]
 gi|219719110|gb|EED37635.1| tryptophanyl-tRNA synthetase [Stenotrophomonas sp. SKA14]
          Length = 430

 Score = 46.0 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 35/215 (16%), Positives = 66/215 (30%), Gaps = 34/215 (15%)

Query: 50  HAGHLT-QLMLLFWLQKT-GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIK 107
           H G+    +       +  G +    +    S+I     +   R  +  +     +    
Sbjct: 16  HLGNYVGAIRPAIAASRAPGIESFFFLADLHSLIKSQDPQRTQRATL--EIAASWLAC-- 71

Query: 108 GIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV--RSR--- 162
                    G                + + +  L  I S   +NR  ++++   ++R   
Sbjct: 72  ---------GLDPEHVWFYRQSDIRETTELMWFLTAIASKGILNRAHAYKAAVDKNREEG 122

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK---TP 219
           +  +  +S   F Y +L A D + + K     +   G DQ  +I    D  +R       
Sbjct: 123 VDEDAGVSAGLFMYPVLMAADIL-IFKANQVPV---GRDQIQHIEMARDFAQRFNHVYGK 178

Query: 220 KLFALTSP-------LLTTASGTKMGKTLSGAIWL 247
           + F L           L    G KM K+    I L
Sbjct: 179 EYFPLPDVVIDEQVATLAGLDGRKMSKSYHNTIPL 213


>gi|190572416|ref|YP_001970261.1| tryptophanyl-tRNA synthetase [Stenotrophomonas maltophilia K279a]
 gi|190010338|emb|CAQ43946.1| putative tryptophanyl-tRNA synthetase [Stenotrophomonas maltophilia
           K279a]
          Length = 430

 Score = 46.0 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 35/215 (16%), Positives = 66/215 (30%), Gaps = 34/215 (15%)

Query: 50  HAGHLT-QLMLLFWLQKT-GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIK 107
           H G+    +       +  G +    +    S+I     +   R  +  +     +    
Sbjct: 16  HLGNYVGAIRPAIAASRAPGIESFFFLADLHSLIKSQDPQRTQRATL--EIAASWLAC-- 71

Query: 108 GIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV--RSR--- 162
                    G                + + +  L  I S   +NR  ++++   ++R   
Sbjct: 72  ---------GLDPEHVWFYRQSDIRETTELMWFLTAIASKGILNRAHAYKAAVDKNREEG 122

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK---TP 219
           +  +  +S   F Y +L A D + + K     +   G DQ  +I    D  +R       
Sbjct: 123 VDEDAGVSAGLFMYPVLMAADIL-IFKANQVPV---GRDQIQHIEMARDFAQRFNHVYGK 178

Query: 220 KLFALTSP-------LLTTASGTKMGKTLSGAIWL 247
           + F L           L    G KM K+    I L
Sbjct: 179 EYFPLPDVVIDEQVATLAGLDGRKMSKSYHNTIPL 213


>gi|227549941|ref|ZP_03979990.1| tryptophanyl-tRNA synthetase [Corynebacterium lipophiloflavum DSM
           44291]
 gi|227077957|gb|EEI15920.1| tryptophanyl-tRNA synthetase [Corynebacterium lipophiloflavum DSM
           44291]
          Length = 336

 Score = 46.0 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 47/250 (18%), Positives = 82/250 (32%), Gaps = 37/250 (14%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   TA S H G+    +  +   + GH     +    +I  D     E R        Q
Sbjct: 10  GIQPTADSYHLGNYLGALKQWIDLQDGHDAFYFIPDLHAITVD-QDPAELRERTLKGCAQ 68

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLS-FESV 159
                I    S+          A +    TW        +L+ +  F   +RM    +  
Sbjct: 69  LIALGIDPNVSTLFVQSHVPAHAEL----TW--------VLQCLTGFGEASRMTQFKDKA 116

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             + +   ++    F Y +L A D + L       +   G DQ  ++    +L ER  + 
Sbjct: 117 AKQGQDRATVGL--FTYPVLMAADIL-LYSPQLVPV---GEDQRQHLELTRNLAERFNSR 170

Query: 220 KLFALTSPLLTT--ASG-----------TKMGKTLSGAIWLNKEMTSPYNFWQYWRN-ID 265
             F  T  +       G           TKM K+ +    L   +  P    +  ++ + 
Sbjct: 171 --FGETFVVPEGFIPEGASKIYDLQDPTTKMSKSGANPKGLINLLDDPKTSTKRIKSAVT 228

Query: 266 DAD-VVSFAK 274
           D D V+++ K
Sbjct: 229 DNDGVIAYDK 238


>gi|194364020|ref|YP_002026630.1| tryptophanyl-tRNA synthetase [Stenotrophomonas maltophilia R551-3]
 gi|194346824|gb|ACF49947.1| tryptophanyl-tRNA synthetase [Stenotrophomonas maltophilia R551-3]
          Length = 430

 Score = 46.0 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 35/215 (16%), Positives = 66/215 (30%), Gaps = 34/215 (15%)

Query: 50  HAGHLT-QLMLLFWLQKT-GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIK 107
           H G+    +       +  G +    +    S+I     +   R  +  +     +    
Sbjct: 16  HLGNYVGAIRPAIAASRAPGIESFFFLADLHSLIKSQDPQRTQRATL--EIAASWLAC-- 71

Query: 108 GIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV--RSR--- 162
                    G                + + +  L  I S   +NR  ++++   ++R   
Sbjct: 72  ---------GLDPEHVWFYRQSDIRETTELMWFLTAIASKGILNRAHAYKAAVDKNREEG 122

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK---TP 219
           +  +  +S   F Y +L A D + + K     +   G DQ  +I    D  +R       
Sbjct: 123 VDEDAGVSAGLFMYPVLMAADIL-IFKANQVPV---GRDQIQHIEMARDFAQRFNHVYGK 178

Query: 220 KLFALTSP-------LLTTASGTKMGKTLSGAIWL 247
           + F L           L    G KM K+    I L
Sbjct: 179 EYFPLPDVVIDEQVATLAGLDGRKMSKSYHNTIPL 213


>gi|330996056|ref|ZP_08319950.1| tryptophan--tRNA ligase [Paraprevotella xylaniphila YIT 11841]
 gi|329574053|gb|EGG55631.1| tryptophan--tRNA ligase [Paraprevotella xylaniphila YIT 11841]
          Length = 364

 Score = 46.0 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 55/369 (14%), Positives = 100/369 (27%), Gaps = 76/369 (20%)

Query: 44  LTASSLHAGHLTQLMLLFW---LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH      L     LQ +G      +    +     +  +  +      E+ 
Sbjct: 13  PTGK-LHIGHYVG--SLRRRVELQNSGQFDKIFIFEADAQALTDNIDNPEKVRQNVIEVA 69

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
            +                 K+   + +    LC + +   +  +              ++
Sbjct: 70  LDYLACG--------IDPAKSTIFIQSQIPELCELSFY-FMDLVSVSRLQRNPTVKTEIQ 120

Query: 161 SR-LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQ------------WGNII 207
            R  +    + F  F Y I QA D           + +G  DQ              N I
Sbjct: 121 MRNFEASIPVGF--FAYPISQAADITAFKA---TTVPVG-EDQEPMLEQAREIVRRFNYI 174

Query: 208 CGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYW------ 261
            G  L E        A    L  T    KM K+L   I+L+          +        
Sbjct: 175 YGDTLVEPNILLPENAACLRLPGTDGKAKMSKSLGNCIYLSDSADEVEKKIRTMYTDPNH 234

Query: 262 RNIDD------ADVVSFAKRLT-----------TLPMSEIDRMAKLQGKEINEAKKIIAT 304
             + D        V ++    +              + E+    +  G    + KK +A 
Sbjct: 235 LKVSDPGQVEGNTVFTYLDAFSRPEHFGRYLPDYADLEELKAHYRRGGLGDVKVKKFLAA 294

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATS 364
            +      +EE E                Q +P +    + +  G      +     A +
Sbjct: 295 VM------QEELEPIRQ------RRKEFEQDIPAV---YEMLKNGCEAARAVA----ADT 335

Query: 365 TNEARRHLK 373
            +E R+ +K
Sbjct: 336 LSEVRKAMK 344


>gi|259501882|ref|ZP_05744784.1| tryptophan-tRNA ligase [Lactobacillus antri DSM 16041]
 gi|259170207|gb|EEW54702.1| tryptophan-tRNA ligase [Lactobacillus antri DSM 16041]
          Length = 340

 Score = 46.0 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 37/225 (16%), Positives = 70/225 (31%), Gaps = 33/225 (14%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     LQ TG +    ++    ++  +    ++ RR +    +  
Sbjct: 14  PTGK-LHIGHYVGSLKNRVALQNTGKYDTYIMIADQQALTDNARDPEKIRRSLHEVSLDY 72

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIG-SFFSVNRMLSFESVR 160
               I             K+   + +    L  +  +  L  +  S    N  +  E  +
Sbjct: 73  LAVGIDPQ----------KSTIFVQSQIPALSELT-MHYLNLVTVSRLKRNPTVKTEIQQ 121

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP- 219
            +        FL   Y + QA D      +    + +G  DQ   +    ++        
Sbjct: 122 KKFGESVPAGFL--IYPVSQAADITAFKAD---TVPVG-DDQEPMLEQTREIVRTFNRIY 175

Query: 220 KLFALTSP----------LLTTASGT-KMGKTLSGAIWLNKEMTS 253
               L  P           +    G  KM K+L  AI+L+ +  +
Sbjct: 176 DQEILVEPEGVFPPKGEGRIPGLDGNAKMSKSLGNAIYLSDDADT 220


>gi|295838560|ref|ZP_06825493.1| tryptophan-tRNA ligase [Streptomyces sp. SPB74]
 gi|197697815|gb|EDY44748.1| tryptophan-tRNA ligase [Streptomyces sp. SPB74]
          Length = 337

 Score = 46.0 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 48/309 (15%), Positives = 99/309 (32%), Gaps = 51/309 (16%)

Query: 31  CSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSII--GDPSFRD 88
            +        G   +A S H G+    +  +   +  H    ++    +I    DP+   
Sbjct: 1   MASERTRVLSGIQPSAGSFHLGNYLGAVRQWVALQETHDAFYMVVDLHAITVPQDPATLR 60

Query: 89  ESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFF 148
            + R+  +Q +   I+  +               A ++N  T       +   ++  +  
Sbjct: 61  ANTRLSAAQLLAAGIDPERSALFVQSHMREHAELAWVMNCLTGFGEASRMTQFKDKSAK- 119

Query: 149 SVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIIC 208
                          +  +  +   F Y +LQ  D + L + +   +   G DQ  ++  
Sbjct: 120 ---------------QGAEGTTVGLFTYPVLQVADIL-LYQAHQVPV---GEDQRQHVEL 160

Query: 209 GIDLGERLKT--------PKLFAL--TSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNF 257
             DL ER           P+ + +  T+ +      T KM K+ +    L   M  P   
Sbjct: 161 TRDLAERFNARYGETFVVPEAYIVKETAKIYDLQEPTAKMSKSAASPKGLVNLMDEPKAT 220

Query: 258 WQYWRN-IDDAD---------------VVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKI 301
            +  R+ + D +               ++     LT + + E++   K  GK     K  
Sbjct: 221 AKKIRSAVTDTETEIRFDRAHKPGVSNLLGIYSNLTGVTVPELEE--KYAGKGYGALKTD 278

Query: 302 IATEITTMV 310
           +A  +   V
Sbjct: 279 LADVVVDFV 287


>gi|72004278|ref|XP_780428.1| PREDICTED: hypothetical protein isoform 3 [Strongylocentrotus
           purpuratus]
 gi|115933993|ref|XP_001192644.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
          Length = 424

 Score = 46.0 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 59/328 (17%), Positives = 109/328 (33%), Gaps = 51/328 (15%)

Query: 15  RGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +    L    ++     Y G   +++S+H GHL   +   WLQ     P+ +
Sbjct: 88  RGIFFSQRDLHLILTRYEAKKPFFLYTGRGPSSTSMHVGHLIPFIFTKWLQDVFDVPLVI 147

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                        + E    +  +  ++ I     +  +FI +      A          
Sbjct: 148 QLTDDEKFLWKDLKAEEANKLAYENAKDIIALGFDVNKTFI-FSDMNYIA---------- 196

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA--------YDFV 185
                +  R +     V + +++  V+       S    + ++  +QA            
Sbjct: 197 --SCPEFYRNMLK---VQKCVTYNQVKGIFGFGDSDCIGKISFPAVQASPSFSNSFPAIF 251

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTASGTKMGKTLS 242
              K+  C +     DQ        D+  RL  PK   + +   P L  A  TKM  +  
Sbjct: 252 GTKKDIPCLIPC-AIDQDPYFRMTRDVAPRLGYPKPALIHSTFFPALQGAQ-TKMSASDP 309

Query: 243 G-AIWLN------KEMTSPYNFWQYWRNIDDA-------DVVSFAKRLTTLPMSEIDRMA 288
             +I+L       K   + Y F     ++++        DV    + LT   + + DR+A
Sbjct: 310 NSSIFLTDTPKQIKTKINKYAFSGGGVSVEEHREKGGNCDVDIAYQYLTFF-LEDDDRLA 368

Query: 289 KLQGKE------INEAKKIIATEITTMV 310
           K + +         E KK + T +  MV
Sbjct: 369 KFREEYSSGRMLTGEIKKELITILQKMV 396


>gi|16767752|ref|NP_463367.1| tryptophanyl-tRNA synthetase II [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|167991301|ref|ZP_02572400.1| tryptophanyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
 gi|200388639|ref|ZP_03215251.1| tryptophanyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|16423074|gb|AAL23326.1| putative tryptophanyl-tRNA synthetase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|199605737|gb|EDZ04282.1| tryptophanyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|205330387|gb|EDZ17151.1| tryptophanyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
 gi|261249594|emb|CBG27463.1| probable tryptophanyl-tRNA synthetase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. D23580]
 gi|267996858|gb|ACY91743.1| tryptophanyl-tRNA synthetase II [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 14028S]
 gi|301160990|emb|CBW20526.1| probable tryptophanyl-tRNA synthetase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. SL1344]
 gi|312915605|dbj|BAJ39579.1| tryptophanyl-tRNA synthetase II [Salmonella enterica subsp.
           enterica serovar Typhimurium str. T000240]
 gi|321222521|gb|EFX47593.1| Tryptophanyl-tRNA synthetase ; type 2 [Salmonella enterica subsp.
           enterica serovar Typhimurium str. TN061786]
 gi|323132847|gb|ADX20277.1| tryptophanyl-tRNA synthetase II [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 4/74]
 gi|332991317|gb|AEF10300.1| tryptophanyl-tRNA synthetase II [Salmonella enterica subsp.
           enterica serovar Typhimurium str. UK-1]
          Length = 337

 Score = 46.0 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 35/217 (16%), Positives = 63/217 (29%), Gaps = 29/217 (13%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMR-SQEIQEN 102
            T  SLH GH    +      +  H+   L+     +       D      +    I + 
Sbjct: 13  PTG-SLHLGHYVGSLRQRVALQQDHQQYVLIADLQGL------TDNGSNPQKIRDNIPQV 65

Query: 103 IEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR 162
           +     +           T   + +    L  +  + +     +    N  +  E  +  
Sbjct: 66  LADYLAVG-----IDPTLTTICLQSALPALAELTVLYMNIVTVARVERNPTVKNEIAQKG 120

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT---- 218
             R   + F    Y I QA D       +   +   G DQ   I    ++  ++ +    
Sbjct: 121 FTRSLPVGF--MAYPISQAADITA----FKAEMVPVGDDQLPMIEQTNEIVHKMNSLFSS 174

Query: 219 ---PKLFALTSPL--LTTASG-TKMGKTLSGAIWLNK 249
                  AL S    L    G  KM K+L   + L+ 
Sbjct: 175 PVLRPCQALLSDTGRLPGIDGSAKMSKSLGNTLLLSA 211


>gi|317492565|ref|ZP_07950992.1| tRNA synthetase class I [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316919315|gb|EFV40647.1| tRNA synthetase class I [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 338

 Score = 46.0 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 37/217 (17%), Positives = 67/217 (30%), Gaps = 29/217 (13%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMR-SQEIQEN 102
            T   LH GH    +      +  +    L+     +       D      + SQ I E 
Sbjct: 16  PTGP-LHLGHYVGSLRQRVTLQDRYPQYVLIADLQGL------TDNGSNPQKISQNIFEV 68

Query: 103 IEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR 162
           +     +          KT   + +    L  +  + +     +    N  +  E  +  
Sbjct: 69  MADYLAVG-----IDPAKTTICLQSALPALAELTMLYMNIVTVARVERNPTVKAEIAQKG 123

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT---- 218
             R     FL   Y I QA D      +   R+ +G  DQ   +    ++  ++ +    
Sbjct: 124 FSRSLPTGFL--VYPISQAADITAFKAD---RVPVG-DDQLPMLEQTNEIVHKMNSLLPN 177

Query: 219 ---PKLFALTSPL--LTTASGT-KMGKTLSGAIWLNK 249
                  A+ S +  L    G  KM K+L   + L+ 
Sbjct: 178 PVLVPCQAMLSSVSRLPGIDGNAKMSKSLGNTLTLSA 214


>gi|251795936|ref|YP_003010667.1| tryptophanyl-tRNA synthetase [Paenibacillus sp. JDR-2]
 gi|247543562|gb|ACT00581.1| tryptophanyl-tRNA synthetase [Paenibacillus sp. JDR-2]
          Length = 331

 Score = 46.0 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 47/294 (15%), Positives = 86/294 (29%), Gaps = 48/294 (16%)

Query: 37  TAYIGYDLTASSLHAGHLTQLML--LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMM 94
           T   G   T   +H G+    +   L   +K     +  +     +            + 
Sbjct: 3   TVLTGIKPTGR-VHIGNYIAAIKPALEIAKKQDRTALYFIADYHGLT----------FIQ 51

Query: 95  RSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRML 154
              E  +    I   +   +  G      +           +   +L  +     +NR  
Sbjct: 52  NRDEFNDLSYGIAATW---LALGLNPEQVVFYRQSDVPEIFELSWILACMAPKGLMNRAH 108

Query: 155 SFESVRSR-----LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICG 209
           ++++V  +     +  +  ++   F Y IL A D + L +     +   G DQ  ++   
Sbjct: 109 AYKAVVDKNEQLGVDTDTGVNMGLFTYPILMAADIL-LFQTDQVPV---GKDQIQHVEIA 164

Query: 210 IDLGERLKTPKLFALTSPL-----------LTTASGTKMGKTLSGAIWLNKEMTSPYNFW 258
            DL E       +  T  L           +    G KM K+ +  I L +   S     
Sbjct: 165 RDLAEAFNRN--YGETFKLPNYIVDEQTAVIPGLDGRKMSKSYNNTIPLFESADSLMKLI 222

Query: 259 Q--YWRNID-----DAD---VVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKII 302
                 +       D D   +    K   T    EI R     G    EAK+ +
Sbjct: 223 SRIKTDSTPPHEPKDPDTSNIYLLYKEFATDEQIEILRKKFQSGISWGEAKQEL 276


>gi|254875380|ref|ZP_05248090.1| tryptophanyl-tRNA synthetase [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|254841379|gb|EET19815.1| tryptophanyl-tRNA synthetase [Francisella tularensis subsp.
           tularensis MA00-2987]
          Length = 243

 Score = 46.0 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 22/93 (23%), Positives = 36/93 (38%), Gaps = 16/93 (17%)

Query: 166 EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL--------GERLK 217
           ++ ++   FNY +L A D +     +D  L   G DQ  +I    D+         + + 
Sbjct: 89  DKGITMGLFNYPVLMAADILI----FDADLVPVGKDQIQHIEIARDIANRFNHIYQKPVL 144

Query: 218 TPKLFALTS---PLLTTASGTKMGKTLSGAIWL 247
                ALTS     +    G KM K+    I +
Sbjct: 145 KAPQ-ALTSEDSQTILGLDGRKMSKSYDNTIAI 176


>gi|4128224|gb|AAD03560.1| tyrosyl-tRNA synthetase [Drosophila virilis]
          Length = 237

 Score = 46.0 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 42/245 (17%), Positives = 74/245 (30%), Gaps = 25/245 (10%)

Query: 2   PAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
               +D    L  R    +     +L+ +  +  +  Y G   T    H  +   +  + 
Sbjct: 4   TTLSADEKKQLITRNL-QETLGEDKLNKVLQERDLKIYWGTATTGKP-HVAYFVPMSKIA 61

Query: 62  WLQKTGHKPISLMGGGTSII---GDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT 118
              K G +   L     + +     P    E R     Q I+  +  I       +K+  
Sbjct: 62  DFLKAGCEVTILFADLHAYLDNMKAPWPLLELRTKYYEQVIKAMLSSIGVPLDK-LKFVK 120

Query: 119 GKTDALMLNNETWLCSIKYIDLLREIGSFFSV--NRMLSFESVRSRLKREQSLSFLEFNY 176
           G            L     +D+ + + S  ++   +    E V+   + E  L      Y
Sbjct: 121 GSDYQ--------LSREYTLDVYK-LSSLVTIHDAKKAGAEVVK---QVEHPL-LSCLLY 167

Query: 177 MILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTK 236
             LQ  D   L        Q GG DQ            +L   K     +P++   +G K
Sbjct: 168 PGLQGLDEEYLK----VDAQFGGVDQRKIFTFSEKYLPQLGYEKRIHFMNPMVPGLAGGK 223

Query: 237 MGKTL 241
           M  + 
Sbjct: 224 MSSSE 228


>gi|319900074|ref|YP_004159802.1| tryptophanyl-tRNA synthetase [Bacteroides helcogenes P 36-108]
 gi|319415105|gb|ADV42216.1| tryptophanyl-tRNA synthetase [Bacteroides helcogenes P 36-108]
          Length = 364

 Score = 46.0 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 45/245 (18%), Positives = 71/245 (28%), Gaps = 42/245 (17%)

Query: 44  LTASSLHAGHLTQLMLLFW---LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH      L     LQ +G    + +      I D      +  M   ++++
Sbjct: 13  PTGR-LHIGHYVG--SLRRRVELQNSGLYDKTFI-----FIADAQ--ALTDNMENPEKVR 62

Query: 101 ENIEKIKGIFSSFIKY-----GTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLS 155
           +N+          + Y        K+   + +    LC + +  +     S    N  + 
Sbjct: 63  QNV------IEVALDYLACGLDPTKSTIFIQSQIPELCELTFYYMDLVTVSRLQRNPTVK 116

Query: 156 FESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQ------------W 203
            E      +    + F  F Y I QA D           + +G  DQ             
Sbjct: 117 TEIQMRNFETSIPVGF--FTYPISQAADITAFRA---TTVPVG-EDQEPMLEQAREIVRR 170

Query: 204 GNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
            N I G  L E        A    L  T    KM K+L   I+L+          +    
Sbjct: 171 FNYIYGETLVEPEILLPENAACLRLPGTDGKAKMSKSLGNCIYLSDTADEVQKKVKSMYT 230

Query: 264 IDDAD 268
             D  
Sbjct: 231 DPDHL 235


>gi|288929229|ref|ZP_06423074.1| tryptophan--tRNA ligase [Prevotella sp. oral taxon 317 str. F0108]
 gi|288329331|gb|EFC67917.1| tryptophan--tRNA ligase [Prevotella sp. oral taxon 317 str. F0108]
          Length = 327

 Score = 46.0 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 49/299 (16%), Positives = 92/299 (30%), Gaps = 53/299 (17%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESR--RMMRSQE 98
           G   T + LH G+    +  F   +  ++ +  +    S+   P   D  R  R++ ++ 
Sbjct: 7   GIRPTGN-LHLGNYFGAVKSFVKMQDEYESLFFIADWHSLTTSPKPEDIQRSARVILAEY 65

Query: 99  IQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
           +   I+  K                L  N   +L  ++ +   ++       N       
Sbjct: 66  LACGIDPQKAKIYVQSDVKETLELYLFFNMNMYLGELERVTTFKDKARQQPDNV------ 119

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK- 217
                     L      Y  L A D ++  + +   +   G DQ  N+        R   
Sbjct: 120 -------NAGL----LTYPTLMAADILQ-HRAHKVPV---GKDQEQNMEMARKCARRFNH 164

Query: 218 --------TPKLFALTSPLL--TTASGT-KMGKTLSGAIWLNKE--------MTSPYNFW 258
                    P+ F   +  +      G+ KMGK+    I+L +E        M +  +  
Sbjct: 165 IYGVDFFPEPQNFYFNTQAVKVPGLDGSGKMGKSDGNCIYLYEEDAAIRKKVMKAVTDMG 224

Query: 259 QYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEA-------KKIIATEITTMV 310
               N    +V+      T L +           ++ N+        KK IA +I   V
Sbjct: 225 PQAPNSPKPEVIE--NLFTFLRICSEPETYNYFDEKWNDCSIRYGDLKKQIAEDIIKTV 281


>gi|256763030|ref|ZP_05503610.1| tryptophanyl-tRNA synthetase [Enterococcus faecalis T3]
 gi|256684281|gb|EEU23976.1| tryptophanyl-tRNA synthetase [Enterococcus faecalis T3]
          Length = 334

 Score = 46.0 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 53/342 (15%), Positives = 100/342 (29%), Gaps = 55/342 (16%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
            T   LH GH    +      +        +     +I D      +      +++  N+
Sbjct: 10  PTGK-LHLGHYVGSLKKRVEMQADPTNQLFV-----MIADLQ--ALTDNAKNPEKVSANV 61

Query: 104 EKIKGIFSSFIKY-----GTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
                     + Y        KT   + +    L  +    L     S    N  +  E 
Sbjct: 62  ------LEVALDYLAVGLDPTKTTIFIQSQIPQLAELTMYYLNLVTTSRVRRNPTVKAEI 115

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
            + +        F  F Y + QA D       +   L   G DQ   +    ++      
Sbjct: 116 EQKKFGEGVPTGF--FIYPVSQAADITA----FQANLVPVGEDQKPMLEQAQEIVHSFNQ 169

Query: 219 PKLFALTSP----------LLTTASGT-KMGKTLSGAIWLNKEMT--SPYNFWQYW---- 261
                L  P           L    G  KM K+L   I+L+             Y     
Sbjct: 170 TYGEVLVRPEAVLPPKGMGRLPGIDGNGKMSKSLGNGIYLSDPAEVVQKKVMSMYTDPNH 229

Query: 262 RNIDD------ADVVSFAKRL--TTLPMSEIDRMAKLQGKEINEAKK----IIATEITTM 309
             I+D        V ++          + E+    +  G    + K+    ++  E+  +
Sbjct: 230 IRIEDPGQVEGNMVFTYLDVFGKDKEYIEELKEHYRHGGLGDVKIKRYLIDVLEEELAPI 289

Query: 310 VHGREEAEKAATAAME-CFDMSIHSQHMPTISISKDEVSRGM 350
              REE  K   A ME     S+ ++ +   ++++ + + G+
Sbjct: 290 RRRREELAKNPEAIMEMLHKGSLAAEKVAAQTLTEVKKAMGI 331


>gi|187921815|ref|YP_001890847.1| tryptophanyl-tRNA synthetase II [Burkholderia phytofirmans PsJN]
 gi|187720253|gb|ACD21476.1| tryptophanyl-tRNA synthetase [Burkholderia phytofirmans PsJN]
          Length = 342

 Score = 46.0 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 51/337 (15%), Positives = 103/337 (30%), Gaps = 48/337 (14%)

Query: 45  TASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIE 104
           T   LH GH    +      +   +   L+    ++       +  R    ++ + E   
Sbjct: 20  TGP-LHLGHYIGSLRSRVQLQHEAQQFLLLADAQAMTD-----NVGRHQKVTENVIEVAL 73

Query: 105 KIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK 164
               +          K+   + +    L  +    L     +    N  +  E V    +
Sbjct: 74  DYLAVG-----IDPAKSTIFIQSQVPELAELTQYLLNLVTVARLERNPTIKAEIVLRGFE 128

Query: 165 REQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKLF 222
           R+    FL   Y + QA D          R+ +G  DQ   I    +L  R      +  
Sbjct: 129 RDIPAGFL--TYPVSQAADITAFKA---TRVPVG-DDQLPMIEQTNELVRRFNNTVDQQV 182

Query: 223 ALTSPL-------LTTASGT-KMGKTLSGAIWLNKEMTSP----YNFWQ--YWRNIDD-- 266
            +           L    G  KM K+L  AI L            N +       + D  
Sbjct: 183 LVECEAVLSHVARLPGIDGKAKMSKSLGNAITLGATPDEITKAVNNMYTDPNHLRVSDPG 242

Query: 267 ----ADVVSFAKRLT-TLPM-SEIDRMAKLQGKEINEAKKIIATEITTMV------HGRE 314
                 V +F       +PM  E+    +  G   +  K+++   + +++          
Sbjct: 243 QVEGNVVFAFLDAFEPDVPMVDELKAHYRRGGLGDSAVKRVLNERLQSLIAPIRERRREF 302

Query: 315 EAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMG 351
           EA++A          ++ ++ +   ++S+   + G+ 
Sbjct: 303 EADRA-EVLNVLRRGTMRAREVAGATVSEVRNALGLN 338


>gi|295098442|emb|CBK87532.1| tryptophanyl-tRNA synthetase [Enterobacter cloacae subsp. cloacae
           NCTC 9394]
          Length = 333

 Score = 46.0 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 35/217 (16%), Positives = 61/217 (28%), Gaps = 29/217 (13%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMR-SQEIQEN 102
            T   LH GH    +      +  H    L+     +       D      +    I E 
Sbjct: 12  PTGP-LHLGHFVGSLRQRVALQHTHNQFVLIADLQGL------TDNGSNPQKIRDNIPEV 64

Query: 103 IEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR 162
           +                 T   + +    L  +  + +     +    N  +  E  +  
Sbjct: 65  LADYLAAG-----IDPNLTTICLQSALPALAELTMLYMNIVTVARVERNPTVKNEIAQKG 119

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT---- 218
             R   + F    Y I QA D        +C     G DQ   I    ++  ++ +    
Sbjct: 120 FARSLPVGF--MAYPISQAADITAFKA--ECV--PVGDDQLPMIEQTNEIVHKMNSLLPA 173

Query: 219 ------PKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
                   + + TS L     G KM K+L   + L+ 
Sbjct: 174 PVLRHCKAMLSDTSRLPGIDGGAKMSKSLGNTLHLSA 210


>gi|289428109|ref|ZP_06429812.1| tryptophan--tRNA ligase [Propionibacterium acnes J165]
 gi|289158709|gb|EFD06910.1| tryptophan--tRNA ligase [Propionibacterium acnes J165]
          Length = 399

 Score = 46.0 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 44/263 (16%), Positives = 75/263 (28%), Gaps = 35/263 (13%)

Query: 22  SNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSI 80
           S+  E D+           G   T  SLH GH    +     LQ  G +   ++     +
Sbjct: 58  SDKVEADLAVHPDKWRILTGDRPTG-SLHIGHYFGSLANRVRLQSKGIESFLVVADY-QV 115

Query: 81  IGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDL 140
           I D     + +  + S         I    ++        +    LN          +  
Sbjct: 116 IYDRDGVGDLQANVMSNVADYLAIGIDPTLTTIF----THSALPALN-------QLLLPF 164

Query: 141 LREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGS 200
           L  +            + +      E+ +S L   + + QA D +    N    L   G 
Sbjct: 165 LSLVTDAELRRNPTVKDELA---TSERPMSGLMLTFPVHQAADILFCKAN----LVPVGR 217

Query: 201 DQWGNIICGIDLGERLKT--------------PKLFALTSPLLTTASGTKMGKTLSGAIW 246
           DQ  +I     +  R                 P+     +P +    GTKM K+   AI 
Sbjct: 218 DQLPHIEQTRVIARRFDERYGRAEASKPVFPEPEALLSATPHVLGLDGTKMSKSKGNAIE 277

Query: 247 LNKEMTSPYNFWQYWRNIDDADV 269
           L           +  +   D  +
Sbjct: 278 LGMTADQTAKLIKKAKTDADRHI 300


>gi|145591816|ref|YP_001153818.1| tryptophanyl-tRNA synthetase [Pyrobaculum arsenaticum DSM 13514]
 gi|166225535|sp|A4WL99|SYW_PYRAR RecName: Full=Tryptophanyl-tRNA synthetase; AltName:
           Full=Tryptophan--tRNA ligase; Short=TrpRS
 gi|145283584|gb|ABP51166.1| tryptophanyl-tRNA synthetase [Pyrobaculum arsenaticum DSM 13514]
          Length = 374

 Score = 46.0 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 19/81 (23%), Positives = 30/81 (37%), Gaps = 3/81 (3%)

Query: 12  LSERGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWL-QKTGHK 69
           L +RGF +   +   +     +G     Y G   +   +H GH+   +LL W   K G +
Sbjct: 48  LIKRGFFYAHRDFDFILKWHGEGRPWALYTGRGPSGP-VHIGHMVPWILLKWFSDKFGVE 106

Query: 70  PISLMGGGTSIIGDPSFRDES 90
               M        DP  + E 
Sbjct: 107 VYFQMTDDEKFFDDPEMKLEE 127


>gi|88703539|ref|ZP_01101255.1| tryptophanyl-tRNA synthetase [Congregibacter litoralis KT71]
 gi|88702253|gb|EAQ99356.1| tryptophanyl-tRNA synthetase [Congregibacter litoralis KT71]
          Length = 335

 Score = 46.0 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 37/165 (22%), Positives = 60/165 (36%), Gaps = 24/165 (14%)

Query: 174 FNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSP------ 227
           F+Y +L A D + + + +D  +   G DQ  ++    D+ +R           P      
Sbjct: 135 FSYPVLMAADIL-MFRAHDIPV---GRDQIQHVEMARDIAQRFNHNYEELFVLPEARVDD 190

Query: 228 ---LLTTASGTKMGKTLSGAI-WLNKEMTSPYNFWQYWRNI-------DDADVVSFAKRL 276
              +L    G KM K+ +  I   + E     +  +   N+       D AD   F    
Sbjct: 191 DIAVLQGLDGRKMSKSYNNTIPLFDSEKRLKKSVNKIKTNLLEPGDPKDTADSTVFQLWC 250

Query: 277 TTLPMSEIDRMAKLQGKEI--NEAKKIIATEITTMVHG-REEAEK 318
                + I  M +     I   EAKK +   I   + G REE E+
Sbjct: 251 AFADKAAIASMQQAFADGIAWGEAKKQLFELINEELRGPREEYER 295


>gi|188996291|ref|YP_001930542.1| tryptophanyl-tRNA synthetase [Sulfurihydrogenibium sp. YO3AOP1]
 gi|188931358|gb|ACD65988.1| tryptophanyl-tRNA synthetase [Sulfurihydrogenibium sp. YO3AOP1]
          Length = 392

 Score = 46.0 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 32/158 (20%), Positives = 49/158 (31%), Gaps = 25/158 (15%)

Query: 174 FNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT-------PKLFALT- 225
           F Y IL A D +     Y+      G DQ  +I    ++  R               LT 
Sbjct: 191 FGYPILMAADILI----YNADAVPVGEDQLPHIEITREIARRFNNLYSPIFKEPQALLTE 246

Query: 226 SPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDAD------------VVSFA 273
           S  L    G KM K+ +  I L++   +        +                  V S+ 
Sbjct: 247 SSKLLGTDGRKMSKSYNNTIVLSEPRETLEKKVLSMKTDPQRLKKTDPGRPEICNVFSYH 306

Query: 274 KRLTT-LPMSEIDRMAKLQGKEINEAKKIIATEITTMV 310
           K  T    + +I    K       E K+I+   I   +
Sbjct: 307 KYFTDSEDVEKIQVKCKNAEIGCVECKRILFENIDKFL 344


>gi|71019429|ref|XP_759945.1| hypothetical protein UM03798.1 [Ustilago maydis 521]
 gi|46099491|gb|EAK84724.1| hypothetical protein UM03798.1 [Ustilago maydis 521]
          Length = 440

 Score = 46.0 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 24/132 (18%), Positives = 51/132 (38%), Gaps = 15/132 (11%)

Query: 25  RELDILCSQ----GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSI 80
           RELD +  +         Y G   ++ S+H GHL   +   WLQ     P+ +      +
Sbjct: 87  RELDKILDRYEQGKPFFLYTGRGPSSDSMHLGHLIPFLFTKWLQDVFDCPLVI-----QL 141

Query: 81  IGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDL 140
             D  F  +    ++ +++++            I  G       + +N  ++    Y ++
Sbjct: 142 TDDEKFLFK--PALKIEQVKDFA---FKNARDIIACGFKLDKTFIFSNLDYVGGAFYANI 196

Query: 141 LREIGSFFSVNR 152
           +R I    ++N+
Sbjct: 197 VR-ISRMITINQ 207


>gi|269986974|gb|EEZ93250.1| tryptophanyl-tRNA synthetase [Candidatus Parvarchaeum acidiphilum
           ARMAN-4]
          Length = 382

 Score = 45.6 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 45/247 (18%), Positives = 79/247 (31%), Gaps = 38/247 (15%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSF 86
           LD   +      Y G   +   +H GHL       WLQ+T +  + +             
Sbjct: 67  LDDYENNRPFYLYTGRGPSGK-MHIGHLLPFTFALWLQRTFNVNLFI-----------QM 114

Query: 87  RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLL----R 142
            D+ + ++  +E  E  +         I  G       +      L   +   +L     
Sbjct: 115 TDDEKFLISGKEKNEIEKFTNDNILDIISLGFDPKKTHI------LADYRSAKVLYYYAT 168

Query: 143 EIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ---AYDFVEL-AKNYDCRLQMG 198
           ++    +V+       V++      S +  +  +  +Q   A+ F  L  K   C +   
Sbjct: 169 DVAKHITVST------VKAVFGVNDSDNIGKVFFPSMQITPAFLFSALTGKKMRCLIPY- 221

Query: 199 GSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT--KM--GKTLSGAIWLNKEMTSP 254
             DQ        D+  +L   K  A+ S  L    G   KM   KT S AI+L+      
Sbjct: 222 AIDQDPYFRIARDVLPKLGYYKPSAIISKFLPALQGNSAKMSSSKTES-AIFLDDSKAEV 280

Query: 255 YNFWQYW 261
                 +
Sbjct: 281 KKKLMKY 287


>gi|40062487|gb|AAR37439.1| tryptophanyl-tRNA synthetase [uncultured marine bacterium 105]
          Length = 330

 Score = 45.6 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 20/84 (23%), Positives = 30/84 (35%), Gaps = 12/84 (14%)

Query: 176 YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKLFALTSPLLT--- 230
           Y +LQA D +     Y       G DQ  ++    ++  R      ++F    PLLT   
Sbjct: 130 YPLLQAADIIM----YGAHYVPVGEDQVPHLELTREVVRRFHGFYGQVFVEPQPLLTHFP 185

Query: 231 ---TASGTKMGKTLSGAIWLNKEM 251
                   KM K+    I L  + 
Sbjct: 186 RLPGLDNRKMSKSYGNTIDLADDA 209


>gi|319795297|ref|YP_004156937.1| tryptophanyL-tRNA synthetase [Variovorax paradoxus EPS]
 gi|315597760|gb|ADU38826.1| tryptophanyl-tRNA synthetase [Variovorax paradoxus EPS]
          Length = 443

 Score = 45.6 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 19/83 (22%), Positives = 28/83 (33%), Gaps = 13/83 (15%)

Query: 174 FNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSP------ 227
           F Y +L   D + +   +   +   G DQ  +I    D+ +R         T P      
Sbjct: 140 FMYPVLMGADIL-MFNAHKVPV---GRDQVQHIEMARDMAQRFNHQYGEHFTLPEAEIDD 195

Query: 228 ---LLTTASGTKMGKTLSGAIWL 247
               L    G KM K+    I L
Sbjct: 196 AVATLPGLDGRKMSKSYGNTIPL 218


>gi|67466062|ref|XP_649189.1| tryptophanyl-tRNA synthetase [Entamoeba histolytica HM-1:IMSS]
 gi|56465565|gb|EAL43803.1| tryptophanyl-tRNA synthetase, putative [Entamoeba histolytica
           HM-1:IMSS]
          Length = 385

 Score = 45.6 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 50/325 (15%), Positives = 99/325 (30%), Gaps = 50/325 (15%)

Query: 15  RGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +    LD +     +  Y G   ++ +LH GHL   +   +LQ      + +
Sbjct: 55  RGLFFCHRDINAVLDDVEKGNKIYLYTGRGPSSDALHLGHLIPFIFTKYLQDAFDCQLVV 114

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                         D+ + + +   I +  +         I  G       +  + T++ 
Sbjct: 115 -----------QLTDDEKYLWKPVTIADTEKYAIENIKDIIASGLNPKKTFIFTDYTYME 163

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY-----DFVELA 188
            +    ++ +I S  + N++          +   +L  + F    +QA       F  L 
Sbjct: 164 RMYP--VVTKIQSRVTFNQV--KGIFG--FQPHDNLGKISF--PAIQAAPAFPESFPHLF 215

Query: 189 --KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALT---SPLLTTASGTKMGKTLSG 243
             +   C +     DQ        D  E L   K   +     P L  + G KM  +   
Sbjct: 216 GKQKIRCLIPC-AIDQDPYFRMTRDHAESLGAYKPSLIMSKFFPALQGSMG-KMSASDPN 273

Query: 244 -AIWLNKEMTS---------------PYNFWQYWRNIDDADVVSFAKRL--TTLPMSEID 285
            AI+L                        F +   N+DD     + +        + +I 
Sbjct: 274 SAIYLIDTPQQIADKINNHAYCSVQDIEEFKKNGTNVDDDVPYQYLRFFLNDDQQLEKIK 333

Query: 286 RMAKLQGKEINEAKKIIATEITTMV 310
              +       + K I+  ++  +V
Sbjct: 334 NDYESAQMMPQDVKNILIHQLQELV 358


>gi|254474349|ref|ZP_05087735.1| pseudouridine synthase, Rsu:RNA-binding S4:Pseudouridine synthase
           [Ruegeria sp. R11]
 gi|214028592|gb|EEB69427.1| pseudouridine synthase, Rsu:RNA-binding S4:Pseudouridine synthase
           [Ruegeria sp. R11]
          Length = 414

 Score = 45.6 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 11/45 (24%), Positives = 22/45 (48%), Gaps = 1/45 (2%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
             G  +  ++ +AG A S  EA R +    +++N  +I +  L +
Sbjct: 42  PDGDRIAKVLSRAGLA-SRREAERMIADGRVEVNGKVIDSPALNV 85


>gi|208779522|ref|ZP_03246867.1| tryptophanyl-tRNA synthetase [Francisella novicida FTG]
 gi|208744483|gb|EDZ90782.1| tryptophanyl-tRNA synthetase [Francisella novicida FTG]
          Length = 334

 Score = 45.6 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 21/93 (22%), Positives = 36/93 (38%), Gaps = 16/93 (17%)

Query: 166 EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL--------GERLK 217
           ++ ++   FNY +L A D +     +D  L   G DQ  +I    D+         + + 
Sbjct: 128 DKGITMGLFNYPVLMAADILM----FDADLVPVGKDQIQHIEIARDIANRFNHIYQKSVL 183

Query: 218 TPKLFALTS---PLLTTASGTKMGKTLSGAIWL 247
                A+TS     +    G KM K+    I +
Sbjct: 184 KAPQ-AMTSEDSQTILGLDGRKMSKSYDNTIAI 215


>gi|28199527|ref|NP_779841.1| tryptophanyl-tRNA synthetase [Xylella fastidiosa Temecula1]
 gi|182682261|ref|YP_001830421.1| tryptophanyl-tRNA synthetase [Xylella fastidiosa M23]
 gi|32130162|sp|Q87B10|SYW_XYLFT RecName: Full=Tryptophanyl-tRNA synthetase; AltName:
           Full=Tryptophan--tRNA ligase; Short=TrpRS
 gi|28057642|gb|AAO29490.1| tryptophanyl-tRNA synthetase [Xylella fastidiosa Temecula1]
 gi|182632371|gb|ACB93147.1| tryptophanyl-tRNA synthetase [Xylella fastidiosa M23]
 gi|307578537|gb|ADN62506.1| tryptophanyl-tRNA synthetase [Xylella fastidiosa subsp. fastidiosa
           GB514]
          Length = 435

 Score = 45.6 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 33/217 (15%), Positives = 65/217 (29%), Gaps = 38/217 (17%)

Query: 50  HAGHLT-QLMLLFWLQKT-GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIK 107
           H G+    +          G +    +    S+I         R  +  +     +    
Sbjct: 16  HLGNYVGAIRPAIRAAGAPGTESFYFLADLHSLIKVQDPERTQRSTL--EIAATWLAC-- 71

Query: 108 GIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV--RSRLKR 165
                    G       +          + + LL  +     +NR  ++++V  ++R   
Sbjct: 72  ---------GLDPEKVWLYRQSDVPEITELMWLLTCVAGKGILNRAHAYKAVVDKNRSHG 122

Query: 166 EQ---SLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLF 222
           +     ++   F Y +L A D + L   +   +   G DQ  +I    D  +R     ++
Sbjct: 123 DDDDAGITAGLFMYPVLMAADIL-LFNAHQVPV---GRDQIQHIEMARDFAQRFN--HIY 176

Query: 223 A---LTSP---------LLTTASGTKMGKTLSGAIWL 247
               L  P          L    G KM K+    + L
Sbjct: 177 GGEYLVLPEAAIDEQVATLPGLDGRKMSKSYGNTMPL 213


>gi|315173602|gb|EFU17619.1| tryptophan--tRNA ligase [Enterococcus faecalis TX1346]
          Length = 334

 Score = 45.6 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 53/342 (15%), Positives = 100/342 (29%), Gaps = 55/342 (16%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
            T   LH GH    +      +        +     +I D      +      +++  N+
Sbjct: 10  PTGK-LHLGHYVGSLKKRVEMQADPTNQLFV-----MIADLQ--ALTDNAKNPEKVSANV 61

Query: 104 EKIKGIFSSFIKY-----GTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
                     + Y        KT   + +    L  +    L     S    N  +  E 
Sbjct: 62  ------LEVALDYLAVGLDPTKTTIFIQSQIPQLAELTMYYLNLVTTSRVRRNPTVKAEI 115

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
            + +        F  F Y + QA D       +   L   G DQ   +    ++      
Sbjct: 116 EQKKFGEGVPTGF--FIYPVSQAADITA----FQANLVPVGEDQKPMLEQAQEIVHSFNQ 169

Query: 219 PKLFALTSP----------LLTTASGT-KMGKTLSGAIWLNKEMT--SPYNFWQYW---- 261
                L  P           L    G  KM K+L   I+L+             Y     
Sbjct: 170 TYGEVLVRPEAVLPPKGMGRLPGIDGNGKMSKSLGNGIYLSDPAEVVQKKVMSMYTDPNH 229

Query: 262 RNIDD------ADVVSFAKRL--TTLPMSEIDRMAKLQGKEINEAKK----IIATEITTM 309
             I+D        V ++          + E+    +  G    + K+    ++  E+  +
Sbjct: 230 IRIEDPGQVEGNMVFTYLDVFGKDKEYIEELKEHYRHGGLGDVKIKRYLIDVLEEELAPI 289

Query: 310 VHGREEAEKAATAAME-CFDMSIHSQHMPTISISKDEVSRGM 350
              REE  K   A ME     S+ ++ +   ++++ + + G+
Sbjct: 290 RRRREELAKNPEAIMEMLHKGSLVAEKVAAQTLTEVKKAMGI 331


>gi|262375840|ref|ZP_06069072.1| tryptophanyl-tRNA synthetase [Acinetobacter lwoffii SH145]
 gi|262309443|gb|EEY90574.1| tryptophanyl-tRNA synthetase [Acinetobacter lwoffii SH145]
          Length = 337

 Score = 45.6 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 41/217 (18%), Positives = 68/217 (31%), Gaps = 29/217 (13%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
            T   LH GH    +      +  H    L+    ++  +    ++ RR      I E  
Sbjct: 16  PTGQ-LHLGHFVGSLRSRVGLQDSHHQHLLLADAQALTDNADNFEKVRR-----NIIEVA 69

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR- 162
                +          KT   + +    L  +  +  L  +              ++ R 
Sbjct: 70  TDYLAVG-----IDPTKTTICVQSCLPALNELTML-YLNFVTVSRLERNPTIKSEIQMRG 123

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT---- 218
            +R+    FL   Y + QA D       +   +   G DQ   I    ++  RL      
Sbjct: 124 FERDIPAGFL--CYPVAQAADITA----FKATVVPVGEDQIPMIEQTNEIVRRLNRQIGH 177

Query: 219 ---PKLFALTSPL--LTTASGT-KMGKTLSGAIWLNK 249
              P+  AL S +  L    G  KM K+L   I L+ 
Sbjct: 178 DLLPECKALLSNVGRLPGFDGKAKMSKSLGNTIVLDA 214


>gi|168464591|ref|ZP_02698494.1| tryptophanyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Newport str. SL317]
 gi|195632751|gb|EDX51205.1| tryptophanyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Newport str. SL317]
          Length = 337

 Score = 45.6 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 35/217 (16%), Positives = 63/217 (29%), Gaps = 29/217 (13%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMR-SQEIQEN 102
            T  SLH GH    +      +  H+   L+     +       D      +    I + 
Sbjct: 13  PTG-SLHLGHYVGSLRQRVALQQDHQQYVLIADLQGL------TDNGSNPQKIRDNIPQV 65

Query: 103 IEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR 162
           +     +           T   + +    L  +  + +     +    N  +  E  +  
Sbjct: 66  LADYLAVG-----IDPALTTICLQSALPALAELTVLYMNIVTVARVERNPTVKNEIAQKG 120

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT---- 218
             R   + F    Y I QA D       +   +   G DQ   I    ++  ++ +    
Sbjct: 121 FTRSLPVGF--MAYPISQAADITA----FKAEMVPVGDDQLPMIEQTNEIVHKMNSLFSS 174

Query: 219 ---PKLFALTSPL--LTTASG-TKMGKTLSGAIWLNK 249
                  AL S    L    G  KM K+L   + L+ 
Sbjct: 175 PVLRPCQALLSDTGRLPGIDGSAKMSKSLGNTLLLSA 211


>gi|323702569|ref|ZP_08114232.1| tryptophanyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574]
 gi|323532543|gb|EGB22419.1| tryptophanyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574]
          Length = 329

 Score = 45.6 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 37/233 (15%), Positives = 71/233 (30%), Gaps = 47/233 (20%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTS-IIGDPSFRDESRRMMRSQEI 99
           G   T   LH GH   L     LQ   ++    +    +   G    +    R    + +
Sbjct: 10  GMRPTGR-LHLGHQNVLNNWVELQDE-YQCFFFIANWHALTTGWEEAKFI--RQNTLEMV 65

Query: 100 QENIEK--------IKGIFSSFIKYGTGKTDALMLNNETWLCS-IKYIDLLREIGSFFSV 150
            + +          I    S  I++        M+   +WL     Y D +++ G+    
Sbjct: 66  ADWLASGLDPEKSVIFAQ-SDVIEHAELHLIFSMITPLSWLERVPTYKDQIQKFGAM--- 121

Query: 151 NRMLSFESVRSRLKREQSLSFLEFN-YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICG 209
                           + ++   F  Y +LQA D + + K     +   G DQ+ ++   
Sbjct: 122 ---------------GKDINTYGFLGYPLLQAADIL-MYKATAVPV---GEDQFPHVELT 162

Query: 210 IDLGERLKT-------PKLFALTSPL--LTTASGTKMGKTLSGAIWLNKEMTS 253
            ++  R               +   +  L    G KM K+    I +  +   
Sbjct: 163 REVARRFNNLFKPVFPEPQAVVHKKIATLPGVDGAKMSKSYGNVISIGADPDE 215


>gi|331003032|ref|ZP_08326544.1| tryptophanyl-tRNA synthetase [Lachnospiraceae oral taxon 107 str.
           F0167]
 gi|330413076|gb|EGG92451.1| tryptophanyl-tRNA synthetase [Lachnospiraceae oral taxon 107 str.
           F0167]
          Length = 362

 Score = 45.6 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 54/325 (16%), Positives = 92/325 (28%), Gaps = 60/325 (18%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     LQ +G  K I +M      + D     E  R    + + +
Sbjct: 11  PTGK-LHVGHYIGSVKRRVELQNSGEFKKIFIMVADAQALTDNMENPEKVRQNIIEVVLD 69

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
            +                K+   + +    L  + +  +     S    N  +  E    
Sbjct: 70  YLACG---------IDPKKSTIFIQSMVPELTELAFYYMNLVTVSRLQRNPTVKAEIGLR 120

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQ------------WGNIICG 209
             +    + F  F Y I QA D           + +G  DQ              N + G
Sbjct: 121 NFENSIPVGF--FTYPISQASDITAFKA---TTVPVG-EDQLPMIEQTREIVRKFNSVYG 174

Query: 210 IDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYW------RN 263
             L E             L  T    KM K+L   I+L+ +  +  +  +          
Sbjct: 175 ETLVEPEALIPQEDSAKRLPGTDGKAKMSKSLGNCIYLSDDADTVASAIKTMYTDPLHIK 234

Query: 264 IDD------ADVVSFA------KRLTTL-----PMSEIDRMAKLQGKEINEAKKIIATEI 306
           + D        V ++       +  T        + E+       G    + KK +A+ +
Sbjct: 235 VSDPGHLEGNTVFTYLDAFSRPEHFTEYLPDYNSLDELKEHYTRGGLGDMKVKKFLASIM 294

Query: 307 TTMVHGREEAEKAATAAMECFDMSI 331
                  EE      A    F+  I
Sbjct: 295 -------EETLAPMRARRAEFEKDI 312


>gi|167035529|ref|YP_001670760.1| tryptophanyl-tRNA synthetase [Pseudomonas putida GB-1]
 gi|166862017|gb|ABZ00425.1| tryptophanyl-tRNA synthetase [Pseudomonas putida GB-1]
          Length = 449

 Score = 45.6 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 45/282 (15%), Positives = 82/282 (29%), Gaps = 46/282 (16%)

Query: 50  HAGHLTQLM--LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIK 107
           H G+    +   +   Q+ G      +    ++I     +   R  +  +     +    
Sbjct: 16  HLGNYAGAIRPAIRASQQPGVDSFYFLADYHALIKCDDPQRIQRSRL--EIAATWLAG-- 71

Query: 108 GIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLS-FESVRSRLKRE 166
                    G                  +   LL  + +   +NR  +   SV   ++  
Sbjct: 72  ---------GLDPDKVTFYRQSDIPEIPELTWLLTCVAAKGLLNRAHAYKASVDKNVESG 122

Query: 167 Q----SLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL-----K 217
           +     +S   F+Y +L A D +    N   ++ +G  DQ  ++    D+G+R      +
Sbjct: 123 EDPDAGVSMGLFSYPVLMAADILMFNAN---KVPVG-RDQIQHVEMARDIGQRFNHLFGQ 178

Query: 218 TPKLFAL-------TSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNID----- 265
               FAL       +   L    G KM K+    I L        +              
Sbjct: 179 GQDFFALPEAVIEESVATLPGLDGRKMSKSYDNTIPLFTSAKDMKDAISRIVTDSRAPGE 238

Query: 266 --DADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKII 302
             D D              E     R   LQG    +AK+ +
Sbjct: 239 AKDPDNSHLFTLYQAFSTPEQCAGFREELLQGLGWGDAKQRL 280


>gi|62182933|ref|YP_219350.1| tryptophanyl-tRNA synthetase II [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|224586333|ref|YP_002640132.1| tryptophanyl-tRNA synthetase II [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
 gi|62130566|gb|AAX68269.1| putative tryptophanyl-tRNA synthetase [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|224470861|gb|ACN48691.1| tryptophanyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
          Length = 337

 Score = 45.6 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 35/217 (16%), Positives = 63/217 (29%), Gaps = 29/217 (13%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMR-SQEIQEN 102
            T  SLH GH    +      +  H+   L+     +       D      +    I + 
Sbjct: 13  PTG-SLHLGHYVGSLRQRVALQQDHQQYVLIADLQGL------TDNGSNPQKIRDNIPQV 65

Query: 103 IEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR 162
           +     +           T   + +    L  +  + +     +    N  +  E  +  
Sbjct: 66  LADYLAVG-----IDPALTTICLQSALPALAELTVLYMNIVTVARVERNPTVKNEIAQKG 120

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT---- 218
             R   + F    Y I QA D       +   +   G DQ   I    ++  ++ +    
Sbjct: 121 FTRSLPVGF--MAYPISQAADITA----FKAEMVPVGDDQLPMIEQTNEIVHKMNSLFSS 174

Query: 219 ---PKLFALTSPL--LTTASG-TKMGKTLSGAIWLNK 249
                  AL S    L    G  KM K+L   + L+ 
Sbjct: 175 PVLRPCQALLSDTGRLPGIDGSAKMSKSLGNTLLLSA 211


>gi|325278889|ref|YP_004251431.1| tryptophanyl-tRNA synthetase [Odoribacter splanchnicus DSM 20712]
 gi|324310698|gb|ADY31251.1| tryptophanyl-tRNA synthetase [Odoribacter splanchnicus DSM 20712]
          Length = 327

 Score = 45.6 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 49/301 (16%), Positives = 88/301 (29%), Gaps = 59/301 (19%)

Query: 41  GYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDES---RRMMRS 96
           G   T + LH G+    +     LQ   +K    +    S+   P   D +   R+++  
Sbjct: 7   GIRPTGN-LHLGNYFGAVKNFLRLQDE-YKCFFFIADWHSLTTHPHPGDVTANVRKILS- 63

Query: 97  QEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSF 156
           + +   I+  K                L LN   +L  ++ +   +E       N     
Sbjct: 64  EYLACGIDPEKAAIYVQSDVKEVLELYLYLNMNAYLGELQRVTSFKEKARKQPENV---- 119

Query: 157 ESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL 216
                       L      Y  L A D + + +     +   G DQ  N+        R 
Sbjct: 120 ---------NAGL----LTYPTLMAADIL-IHRADKVPV---GKDQEQNMEMARKFARRF 162

Query: 217 KT--------PKL---FALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRN- 263
            T              F   +  +    G+ KMGK+   AI+L  +  +     +     
Sbjct: 163 NTIYGVEFFPEPQSYSFGGDAIKVPGLDGSGKMGKSEGNAIYLIDDAAT---IRKKVMKA 219

Query: 264 IDD--------ADVVSFAKRLTTLPMSEIDRMAKLQGKEIN-------EAKKIIATEITT 308
           + D            + A   T L +           ++ N       + KK +A +I  
Sbjct: 220 VTDSGPTQPNSEKPEAIANLFTMLKIVSSADTYDYFNEKYNACEIRYGDLKKQLAEDIVN 279

Query: 309 M 309
            
Sbjct: 280 F 280


>gi|111114827|ref|YP_709445.1| tryptophanyl-tRNA synthetase [Borrelia afzelii PKo]
 gi|110890101|gb|ABH01269.1| tryptophanyl-tRNA synthetase [Borrelia afzelii PKo]
          Length = 348

 Score = 45.6 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 32/218 (14%), Positives = 67/218 (30%), Gaps = 28/218 (12%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRD-ESRRMMRSQEIQEN 102
            T + LH GH    ++     +  ++   ++    ++   P  +   +      + + + 
Sbjct: 12  PTGA-LHLGHYVGSVVNRLKFQEEYETYFIIADLHTLTTKPDLKSINTIPFNVREMVLDY 70

Query: 103 IEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR 162
           +          I   +   +   L             ++  +     +  +         
Sbjct: 71  LACGINPNKVSIYLQSAIPELFELY--------LIFSMIVTVARLQRIPSIKDMSIAAG- 121

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT---- 218
             +E     L   Y +L + D +    N    L   G D   +I    +L  R       
Sbjct: 122 -LKEIPYGLL--GYPVLMSADILMAKAN----LVPVGRDNESHIEFARELARRFNHLYKN 174

Query: 219 ------PKLFALTSPLLTTASGTKMGKTLSGAIWLNKE 250
                   +F  +SPL+      KM K+L  AI+LN +
Sbjct: 175 NFFPIPESVFTDSSPLVGICGKNKMSKSLDNAIFLNDD 212


>gi|224438143|ref|ZP_03659078.1| tryptophanyl-tRNA synthetase [Helicobacter cinaedi CCUG 18818]
 gi|313144584|ref|ZP_07806777.1| tryptophanyl-tRNA synthetase [Helicobacter cinaedi CCUG 18818]
 gi|313129615|gb|EFR47232.1| tryptophanyl-tRNA synthetase [Helicobacter cinaedi CCUG 18818]
          Length = 340

 Score = 45.6 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 44/328 (13%), Positives = 106/328 (32%), Gaps = 60/328 (18%)

Query: 21  ISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTS- 79
           +++  + +    +     + G   T + +H G+    +  +   +  ++ I  +    + 
Sbjct: 1   MTDTAQRESHTIESKKRVFSGIQPTGN-IHLGNYLGAIKQWVSSQNEYENIFCIVNSHAI 59

Query: 80  -IIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYI 138
               +P+   +    +    +   I+  K       +       A +L+           
Sbjct: 60  TTRQNPAELKQKTFELAGILLACGIDTSKSSLFIQSQIDEHPALAWILD----------- 108

Query: 139 DLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDFVELAKNYDCRLQM 197
                      +  M      + +  +  ++++   FNY  L A D + L + ++  +  
Sbjct: 109 -------CHIPMGDMSRMTQFKDKSNKNSKNINVGLFNYPALMAADIL-LYQAHNVPV-- 158

Query: 198 GGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTTASGT---------KMGKTLSG--- 243
            G DQ  ++    ++  R      + F +  P++               KM K+  G   
Sbjct: 159 -GEDQKQHLELTRNVAIRFNREYGECFRIPEPIIPKIGARIMGLDDPHSKMSKSAKGENH 217

Query: 244 AIWLNKEMTSPYNFWQYWRN-IDDA--------------DVVSFAKRLTTLPMSEIDRMA 288
           AI+L   + SP    +  +  I D+              +++   +  T     +I+   
Sbjct: 218 AIFL---LDSPDIITRKIKKAITDSQTEIVFDESRSGLYNLLCIYEIFTQKSRHDIESEF 274

Query: 289 KLQGKEINEAKKIIATEITTMVHGREEA 316
              GK     K  IA  +   +   +EA
Sbjct: 275 I--GKGYGHLKSAIAEVLVESLRPIQEA 300


>gi|218295611|ref|ZP_03496407.1| tryptophanyl-tRNA synthetase [Thermus aquaticus Y51MC23]
 gi|218243770|gb|EED10297.1| tryptophanyl-tRNA synthetase [Thermus aquaticus Y51MC23]
          Length = 337

 Score = 45.6 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 36/177 (20%), Positives = 57/177 (32%), Gaps = 39/177 (22%)

Query: 174 FNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSP----LL 229
             Y +LQA D + + K     +   G DQ  +I    ++  R     LF  T P    LL
Sbjct: 127 LMYPVLQAADIL-IYKADTVPV---GEDQVQHIELTREIARRFNG--LFGETFPEPQALL 180

Query: 230 -------TTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDA----------DVVS 271
                      G  KM K+L   I L +      + W+  R++ D           D   
Sbjct: 181 NPKAPRVPGIDGKAKMSKSLGNTIGLLEPE---ESIWEKIRHLPDDPQRIRLQDPGDPER 237

Query: 272 FAKRLTTLPMSEIDRMAKLQGKEINEA-------KKIIATEITTMVHGREEAEKAAT 321
                T L     + +     +E   A       K+I+   +   +    E  +A  
Sbjct: 238 -TIVFTYLSYFAPEEVVAALKEEYRRAGVGTLTVKRILFEHLMRALRPIRERAEALK 293


>gi|226365709|ref|YP_002783492.1| tryptophanyl-tRNA synthetase [Rhodococcus opacus B4]
 gi|226244199|dbj|BAH54547.1| tryptophanyl-tRNA synthetase [Rhodococcus opacus B4]
          Length = 344

 Score = 45.6 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 45/243 (18%), Positives = 77/243 (31%), Gaps = 36/243 (14%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSI--IGDPSFRDESRRMMRSQE 98
           G   TA S H G+    +  +   +        +    +I    DP    E RR  +   
Sbjct: 18  GIQPTADSFHLGNFLGALQQWVPLQDDFDAFYFIPDLHAITVAQDP---KELRRRTKIAV 74

Query: 99  IQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLS-FE 157
            Q     I    ++          A +     W        +L  I  F   +RM    +
Sbjct: 75  AQLLALGIDPDRATLFVQSQVPEHAQLA----W--------VLNCITGFGEASRMTQFKD 122

Query: 158 SVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK 217
               +     S+    F Y +L A D + L +     +   G DQ  ++    DL +R  
Sbjct: 123 KSAKQGSENASVGL--FTYPVLMAADIL-LYRPQRVPV---GEDQRQHLELARDLAQRFN 176

Query: 218 T--PKLFAL--------TSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRN-ID 265
           T   K F +        T+ +      T KM K+      L   +  P    +  ++ + 
Sbjct: 177 TRFGKAFVIPEAQIIKGTAKIYDLQDPTSKMSKSGPSPAGLINLLDDPKVSAKKIKSAVT 236

Query: 266 DAD 268
           D +
Sbjct: 237 DNE 239


>gi|168234639|ref|ZP_02659697.1| tryptophanyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
 gi|168821044|ref|ZP_02833044.1| tryptophanyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|194736192|ref|YP_002117426.1| tryptophanyl-tRNA synthetase II [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|204927177|ref|ZP_03218379.1| tryptophanyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
 gi|194711694|gb|ACF90915.1| tryptophanyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. CVM19633]
 gi|197291920|gb|EDY31270.1| tryptophanyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
 gi|204323842|gb|EDZ09037.1| tryptophanyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
 gi|205342314|gb|EDZ29078.1| tryptophanyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|320084593|emb|CBY94384.1| putative tryptophanyl-tRNA synthetase [Salmonella enterica subsp.
           enterica serovar Weltevreden str. 2007-60-3289-1]
          Length = 337

 Score = 45.6 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 35/217 (16%), Positives = 63/217 (29%), Gaps = 29/217 (13%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMR-SQEIQEN 102
            T  SLH GH    +      +  H+   L+     +       D      +    I + 
Sbjct: 13  PTG-SLHLGHYVGSLRQRVALQQDHQQYVLIADLQGL------TDNGSNPQKIRDNIPQV 65

Query: 103 IEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR 162
           +     +           T   + +    L  +  + +     +    N  +  E  +  
Sbjct: 66  LADYLAVG-----IDPALTTICLQSALPALAELTVLYMNIVTVARVERNPTVKNEIAQKG 120

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT---- 218
             R   + F    Y I QA D       +   +   G DQ   I    ++  ++ +    
Sbjct: 121 FTRSLPVGF--MAYPISQAADITA----FKAEMVPVGDDQLPMIEQTNEIVHKMNSLFSS 174

Query: 219 ---PKLFALTSPL--LTTASG-TKMGKTLSGAIWLNK 249
                  AL S    L    G  KM K+L   + L+ 
Sbjct: 175 PVLRPCQALLSDTGRLPGIDGSAKMSKSLGNTLLLSA 211


>gi|162147830|ref|YP_001602291.1| lysyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5]
 gi|209542451|ref|YP_002274680.1| lysyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5]
 gi|161786407|emb|CAP55989.1| putative Lysyl-tRNA synthetase [Gluconacetobacter diazotrophicus
           PAl 5]
 gi|209530128|gb|ACI50065.1| lysyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5]
          Length = 540

 Score = 45.6 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 23/138 (16%), Positives = 38/138 (27%), Gaps = 20/138 (14%)

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI----WL 247
               +M G D   ++     +   L       LT  L    +G K+ K+    I    WL
Sbjct: 249 GVDYEMSGKDLIDSVKLSGKICRILGGQPPAGLTYELFLDENGQKISKSKGNGISVEEWL 308

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAK------KI 301
                 P +  QY  N          +         I + A      +  A+        
Sbjct: 309 --RYAPPESLGQYMFNAP----QRAKRLF----FDVIPKAADEYLANVARAQALPDNDPA 358

Query: 302 IATEITTMVHGREEAEKA 319
           + +     +HG      A
Sbjct: 359 LLSNPAWFIHGGPIGADA 376


>gi|152973219|ref|YP_001338365.1| tryptophanyl-tRNA synthetase II [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|150958068|gb|ABR80098.1| putative tryptophanyl-tRNA synthetase [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
          Length = 335

 Score = 45.6 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 38/227 (16%), Positives = 65/227 (28%), Gaps = 27/227 (11%)

Query: 33  QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRR 92
               T   G   T   LH GH    +      +  H+   L+     +       D    
Sbjct: 2   NHPQTILTGDRPTGQ-LHLGHYVGSLRQRVALQHNHQQFILIADLQGL------TDNGSN 54

Query: 93  MMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNR 152
               +     +E +    +  I   T  T   + +    L  +  + +     +    N 
Sbjct: 55  PQ--KISHHILEVMADYLAVGID--TRLTTICLQSALPALAELSALYMNIVTVARVERNP 110

Query: 153 MLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL 212
            +  E  +    R   + FL   Y I QA D       +   L   G DQ   I    ++
Sbjct: 111 TVKNEIAQKGFARSLPVGFL--AYPISQAADITA----FKAELVPVGDDQLPMIEQTNEI 164

Query: 213 GERLK---TPKLFALTSPL------LTTASGT-KMGKTLSGAIWLNK 249
             ++       +      L      L    G  KM K+L   + L+ 
Sbjct: 165 VHKMNSLTGEPVLRHCKALLSEVSRLPGVDGNAKMSKSLGNTLTLSA 211


>gi|320451274|ref|YP_004203370.1| 30S ribosomal protein S4 [Thermus scotoductus SA-01]
 gi|320151443|gb|ADW22821.1| 30S ribosomal protein S4 [Thermus scotoductus SA-01]
          Length = 209

 Score = 45.6 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 19/121 (15%), Positives = 47/121 (38%), Gaps = 19/121 (15%)

Query: 295 INEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLT 354
           + E +K+        ++G  E +         F+ +   + + T ++    +   +    
Sbjct: 58  LREKQKL------RRIYGISETQ-----FRNLFEEASRKKGV-TGTVFLGLLESRLD--N 103

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           ++ + GFA S  +AR+ ++   I +N   +     ++K  D      I ++ G +N    
Sbjct: 104 VVYRLGFAASRRQARQMVRHGHITVNGRRVDLPAYRVKPGD-----EIAIAEGSRNLAFI 158

Query: 415 H 415
            
Sbjct: 159 R 159


>gi|254373417|ref|ZP_04988905.1| tryptophanyl-tRNA synthetase [Francisella tularensis subsp.
           novicida GA99-3549]
 gi|151571143|gb|EDN36797.1| tryptophanyl-tRNA synthetase [Francisella novicida GA99-3549]
 gi|332678785|gb|AEE87914.1| Tryptophanyl-tRNA synthetase [Francisella cf. novicida Fx1]
          Length = 334

 Score = 45.6 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 22/93 (23%), Positives = 36/93 (38%), Gaps = 16/93 (17%)

Query: 166 EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL--------GERLK 217
           ++ ++   FNY +L A D +     +D  L   G DQ  +I    D+         + + 
Sbjct: 128 DKGITMGLFNYPVLMAADILM----FDADLVPVGKDQIQHIEIARDIANRFNHIYQKPVL 183

Query: 218 TPKLFALTS---PLLTTASGTKMGKTLSGAIWL 247
                ALTS     +    G KM K+    I +
Sbjct: 184 KAPQ-ALTSEDSQTILGLDGRKMSKSYDNTIAI 215


>gi|326381942|ref|ZP_08203635.1| tryptophanyl-tRNA synthetase [Gordonia neofelifaecis NRRL B-59395]
 gi|326199368|gb|EGD56549.1| tryptophanyl-tRNA synthetase [Gordonia neofelifaecis NRRL B-59395]
          Length = 339

 Score = 45.6 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 62/337 (18%), Positives = 105/337 (31%), Gaps = 58/337 (17%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           G   T+ S H G+    +   W+Q          +    + I  P      R        
Sbjct: 13  GIQPTSDSFHLGNYLGAVR-QWVQLQDEFDAFYFIPDMHA-ITVPQDPKVLR-------- 62

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLS-FES 158
               E+ +   +  +  G     A +          +   +L  +  F   +RM    + 
Sbjct: 63  ----ERTRRSVAQLLAVGVDPERATIYVQSHVPEIAQLTWVLTCLTGFGEASRMTQFKDK 118

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
                     +    F Y IL A D +     +       G DQ  ++    DL +R   
Sbjct: 119 SAKSGTDAAGVGL--FTYPILMAADILA----FQVDSVPVGEDQRQHLELTRDLAQRFNK 172

Query: 219 PKLFALTSP----------LLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRN-IDD 266
               ALT P          +    + T KM K+      L   +  P    +  R+ + D
Sbjct: 173 RYGKALTVPKPYIVEEFAKIYDLQNPTAKMSKSADSDAGLINLLDEPKRSAKKIRSAVTD 232

Query: 267 AD------------VVSFAKR---LTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMV- 310
            D            V +       LT   M EI  +A  QGK   + K   A  +T  V 
Sbjct: 233 NDREIVFDRTAKPGVSNLLTIQAALTGRAMDEI--VASYQGKGYGDLKVETADILTEFVT 290

Query: 311 --HGREE---AEKAATAAMECFDMSIHSQHMPTISIS 342
              GR +   A+ A   A+   D +  ++ +   +++
Sbjct: 291 PLRGRVDELLADTAHLDAI-LADGAARAREIAATTVA 326


>gi|198426145|ref|XP_002129278.1| PREDICTED: similar to Tyrosyl-tRNA synthetase, cytoplasmic
           (Tyrosyl--tRNA ligase) (TyrRS) [Ciona intestinalis]
          Length = 608

 Score = 45.6 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 51/289 (17%), Positives = 90/289 (31%), Gaps = 28/289 (9%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L  R    ++    ++  +     +  Y G   T    H  +   +  +    K G +  
Sbjct: 88  LITRNL-QEVLGEDKMTEILQTRDLKVYWGTATTGKP-HVAYFVPMSKIGDFLKAGCEVT 145

Query: 72  SLMGGGTSII---GDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
            L+    + +     P      R       I+  +  I       +K+  G         
Sbjct: 146 ILLADLHAYLDNMKAPWDLLVLRSKYYEHVIKAMLRSIGVPLEK-LKFVQGTDYQ----- 199

Query: 129 ETWLCSIKYIDLLREIGSFFSV-NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
              L     +D+ R          +    E V+   + E  L      Y  LQA D   L
Sbjct: 200 ---LSREYTLDVYRLSSVVTEHDAKKAGAEVVK---QVEHPL-LSGLLYPGLQALDEEYL 252

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT-LSGAIW 246
                   Q GG DQ             L   K   L +P++   +GTKM  +     I 
Sbjct: 253 K----VDAQFGGVDQRKIFTFAEKAMPALGYTKRIHLMNPMVPGLTGTKMSSSVEESKID 308

Query: 247 LNKEMTSPYNFWQYWR----NIDDADVVSFAKRLTTLPMSEIDRMAKLQ 291
           L  +  +     +       N+++  V+SF K +    + EI+ + K +
Sbjct: 309 LLDDPAAVKRKLKKAFCEPGNVENNGVLSFVKSVVFPILGEIEIVRKEE 357


>gi|163815909|ref|ZP_02207279.1| hypothetical protein COPEUT_02089 [Coprococcus eutactus ATCC 27759]
 gi|158448719|gb|EDP25714.1| hypothetical protein COPEUT_02089 [Coprococcus eutactus ATCC 27759]
          Length = 353

 Score = 45.6 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 37/233 (15%), Positives = 74/233 (31%), Gaps = 29/233 (12%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGH--KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +     LQ +G   +   ++    ++  +    ++ R+ +    + 
Sbjct: 11  PTGR-LHVGHYVGSLKRRVDLQNSGRYDEIYIMVADAQALTDNAEHPEKVRQNIMQVALD 69

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
                I             K+   + +    L  + +  +     +    N  +  E   
Sbjct: 70  YLACGI----------DPEKSTIFIQSMVPELTELTFYYMNLVTVARVQRNPTVKAEIKM 119

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRL---QMGGSDQ------WGNIICGID 211
              +    + F  F Y I QA D     K  +  +   QM   +Q        N + G  
Sbjct: 120 RNFEASIPVGF--FCYPISQAADITA-FKATEVPVGEDQMPMIEQCKEIVHKFNSVYGET 176

Query: 212 LGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNI 264
           L +             L  T    KM K+L   I+L+++   P +  +   ++
Sbjct: 177 LVDPKIVLPDNEACLRLPGTDGKAKMSKSLGNCIYLSED---PADIKKKVMSM 226


>gi|315426265|dbj|BAJ47907.1| tryptophanyl-tRNA synthetase [Candidatus Caldiarchaeum
           subterraneum]
 gi|315427916|dbj|BAJ49507.1| tryptophanyl-tRNA synthetase [Candidatus Caldiarchaeum
           subterraneum]
          Length = 386

 Score = 45.6 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 58/329 (17%), Positives = 102/329 (31%), Gaps = 56/329 (17%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ-KTGHKPISLMGGGTSIIGDPS 85
           LD   S      Y G   +   +H GH+       WLQ + G      M        D  
Sbjct: 68  LDDHESGRGFYLYTGRGPSGP-MHVGHIIPFFFTKWLQERFGANVYIQMTD------DEK 120

Query: 86  FRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIG 145
           F +E+R +        +++ +  I +             +  N  ++  +          
Sbjct: 121 FLEETRGLTLEDTAYWSLDNMVNIAAVGFDPDKT----FIFRNTEFMARMYRP------- 169

Query: 146 SFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGN 205
               V R ++F  VR+     +  +     +  +Q      + +   C +     DQ   
Sbjct: 170 -VLKVARKINFSWVRAVFGFNEQTNIGMVFFPAIQ--IVPTMFEKRRCLIP-AAIDQDPY 225

Query: 206 IICGIDLGERLKTPKLFAL----TSPLLTTASGTKMGKTLS-GAIWL-NKEMTSPYNFWQ 259
                D+ E L   K  A+      PL T  +G KM  +    A++L + + T     WQ
Sbjct: 226 WRIQRDIAESLGFYKAAAIHSRFLMPL-TGPTG-KMSASQPEAAVFLTDDDKTVRKKIWQ 283

Query: 260 -------------YWRNIDDADVV-SFAKRLTTLPMSEIDRMAKLQGKEI-------NEA 298
                              D DV   +          E DR  +   +E         E 
Sbjct: 284 AFSGGQPTVELHRKLGGNPDIDVAFQWLYYF----FEEDDRKVEQLREEYVSGRLLTGEL 339

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECF 327
           K+I+  ++   +    EA + A   +  F
Sbjct: 340 KEILIEKVQMFLTRFREAREKAKDKLRLF 368


>gi|315151024|gb|EFT95040.1| tryptophan--tRNA ligase [Enterococcus faecalis TX0012]
          Length = 334

 Score = 45.6 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 51/339 (15%), Positives = 97/339 (28%), Gaps = 49/339 (14%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTG--HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +      +    ++   ++    ++       +       S  + E
Sbjct: 10  PTGK-LHLGHYVGSLKKRVEMQADPTNQLFVMIADLQALTD-----NAKNPKKVSANVLE 63

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
                  +          KT   + +    L  +    L     S    N  +  E  + 
Sbjct: 64  VALDYLAVG-----LDPTKTTIFIQSQIPQLAELTMYYLNLVTTSRVRRNPTVKAEIEQK 118

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKL 221
           +        F  F Y + QA D       +   L   G DQ   +    ++         
Sbjct: 119 KFGEGVPTGF--FIYPVSQAADITA----FQANLVPVGEDQKPMLEQAQEIVHSFNQTYG 172

Query: 222 FALTSP----------LLTTASGT-KMGKTLSGAIWLNKEMT--SPYNFWQYW----RNI 264
             L  P           L    G  KM K+L   I+L+             Y       I
Sbjct: 173 EVLVRPEAVLPPKGMGRLPGIDGNGKMSKSLGNGIYLSDPAEVVQKKVMSMYTDPNHIRI 232

Query: 265 DD------ADVVSFAKRLTTLP--MSEIDRMAKLQG----KEINEAKKIIATEITTMVHG 312
           +D        V ++          + E+    +  G    K       ++  E+  +   
Sbjct: 233 EDPGQVEGNMVFTYLDVFGKEKEYIEELKEHYRHGGLGDVKNKRYLIDVLEEELAPIRRR 292

Query: 313 REEAEKAATAAME-CFDMSIHSQHMPTISISKDEVSRGM 350
           REE  K   A ME     S+ ++ +   ++++ + + G+
Sbjct: 293 REELAKNPEAIMEMLHKGSLAAEKVAAQTLTEVKKAMGI 331


>gi|167551233|ref|ZP_02344988.1| tryptophanyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA29]
 gi|205323904|gb|EDZ11743.1| tryptophanyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA29]
          Length = 337

 Score = 45.6 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 35/217 (16%), Positives = 63/217 (29%), Gaps = 29/217 (13%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMR-SQEIQEN 102
            T  SLH GH    +      +  H+   L+     +       D      +    I + 
Sbjct: 13  PTG-SLHLGHYVGSLRQRVALQQDHQQYVLIADLQGL------TDNGSNPQKIRDNIPQV 65

Query: 103 IEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR 162
           +     +           T   + +    L  +  + +     +    N  +  E  +  
Sbjct: 66  LADYLAVG-----IDPALTTICLQSALPALAELTVLYMNIVTVARVERNPTVKNEIAQKG 120

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT---- 218
             R   + F    Y I QA D       +   +   G DQ   I    ++  ++ +    
Sbjct: 121 FTRSLPVGF--MAYPISQAADITA----FKAEMVPVGDDQLPMIEQTNEIVHKMNSLFSS 174

Query: 219 ---PKLFALTSPL--LTTASG-TKMGKTLSGAIWLNK 249
                  AL S    L    G  KM K+L   + L+ 
Sbjct: 175 PVLRPCQALLSDTGRLPGIDGSAKMSKSLGNTLLLSA 211


>gi|161617807|ref|YP_001591772.1| tryptophanyl-tRNA synthetase II [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|168232858|ref|ZP_02657916.1| tryptophanyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Kentucky str. CDC 191]
 gi|194468762|ref|ZP_03074746.1| tryptophanyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|197261768|ref|ZP_03161842.1| tryptophanyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA23]
 gi|161367171|gb|ABX70939.1| hypothetical protein SPAB_05671 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194455126|gb|EDX43965.1| tryptophanyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|197240023|gb|EDY22643.1| tryptophanyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA23]
 gi|205332936|gb|EDZ19700.1| tryptophanyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Kentucky str. CDC 191]
          Length = 337

 Score = 45.6 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 35/217 (16%), Positives = 63/217 (29%), Gaps = 29/217 (13%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMR-SQEIQEN 102
            T  SLH GH    +      +  H+   L+     +       D      +    I + 
Sbjct: 13  PTG-SLHLGHYVGSLRQRVALQQDHQQYVLIADLQGL------TDNGSNPQKIRDNIPQV 65

Query: 103 IEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR 162
           +     +           T   + +    L  +  + +     +    N  +  E  +  
Sbjct: 66  LADYLAVG-----IDPALTTICLQSALPALAELTVLYMNIVTVARVERNPTVKNEIAQKG 120

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT---- 218
             R   + F    Y I QA D       +   +   G DQ   I    ++  ++ +    
Sbjct: 121 FTRSLPVGF--MAYPISQAADITA----FKAEMVPVGDDQLPMIEQTNEIVHKMNSLFSS 174

Query: 219 ---PKLFALTSPL--LTTASG-TKMGKTLSGAIWLNK 249
                  AL S    L    G  KM K+L   + L+ 
Sbjct: 175 PVLRPCQALLSDTGRLPGIDGSAKMSKSLGNTLLLSA 211


>gi|311747236|ref|ZP_07721021.1| tryptophan--tRNA ligase [Algoriphagus sp. PR1]
 gi|126578947|gb|EAZ83111.1| tryptophan--tRNA ligase [Algoriphagus sp. PR1]
          Length = 325

 Score = 45.6 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 41/263 (15%), Positives = 78/263 (29%), Gaps = 42/263 (15%)

Query: 50  HAGHL----TQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEK 105
           H G++       + L   Q    +    +    S+        E+R+          +  
Sbjct: 15  HLGNILGAIVPAIELIN-QNDKEESFIFIADLHSLTSSKDG--ETRKQNTLAVAAAWLAF 71

Query: 106 IKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKR 165
              I  +     + + +   L   TW            +  F     + +  S + + +R
Sbjct: 72  GLDIDKTVFYRQSRRPEVAEL---TWY-----------LSCFTPFPMLANAHSFKDKSER 117

Query: 166 EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT-PKLFAL 224
              ++   F Y +L A D +     Y   L   G DQ  ++    D+        +   L
Sbjct: 118 LSDVNAGLFTYPVLMAADILL----YSADLVPVGKDQMQHLEMTRDIASAFNRITEEEIL 173

Query: 225 TSP---------LLTTASGTKMGKTLSGAI-------WLNKEMTSPYNFWQYWRNIDDAD 268
           T P          +    G KM K+ +  I        L K + S            D D
Sbjct: 174 TMPEARISESVKTIPGTDGQKMSKSYNNFIDIFLPEKALKKNVNSIVTDSTPLEEPKDPD 233

Query: 269 VVSFAKRLTTLPMSEIDRMAKLQ 291
           V +  K  + +   E  +  + +
Sbjct: 234 VCNVYKLYSLIATEEQTQQLRAK 256


>gi|322615678|gb|EFY12598.1| tryptophanyl-tRNA synthetase II [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315996572]
 gi|322618738|gb|EFY15627.1| tryptophanyl-tRNA synthetase II [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-1]
 gi|322621848|gb|EFY18698.1| tryptophanyl-tRNA synthetase II [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-3]
 gi|322627573|gb|EFY24364.1| tryptophanyl-tRNA synthetase II [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-4]
 gi|322630879|gb|EFY27643.1| tryptophanyl-tRNA synthetase II [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-1]
 gi|322637902|gb|EFY34603.1| tryptophanyl-tRNA synthetase II [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-2]
 gi|322642264|gb|EFY38871.1| tryptophanyl-tRNA synthetase II [Salmonella enterica subsp.
           enterica serovar Montevideo str. 531954]
 gi|322643864|gb|EFY40412.1| tryptophanyl-tRNA synthetase II [Salmonella enterica subsp.
           enterica serovar Montevideo str. NC_MB110209-0054]
 gi|322651058|gb|EFY47443.1| tryptophanyl-tRNA synthetase II [Salmonella enterica subsp.
           enterica serovar Montevideo str. OH_2009072675]
 gi|322656687|gb|EFY52975.1| tryptophanyl-tRNA synthetase II [Salmonella enterica subsp.
           enterica serovar Montevideo str. CASC_09SCPH15965]
 gi|322659888|gb|EFY56131.1| tryptophanyl-tRNA synthetase II [Salmonella enterica subsp.
           enterica serovar Montevideo str. 19N]
 gi|322661902|gb|EFY58118.1| tryptophanyl-tRNA synthetase II [Salmonella enterica subsp.
           enterica serovar Montevideo str. 81038-01]
 gi|322666351|gb|EFY62529.1| tryptophanyl-tRNA synthetase II [Salmonella enterica subsp.
           enterica serovar Montevideo str. MD_MDA09249507]
 gi|322672770|gb|EFY68881.1| tryptophanyl-tRNA synthetase II [Salmonella enterica subsp.
           enterica serovar Montevideo str. 414877]
 gi|322676200|gb|EFY72271.1| tryptophanyl-tRNA synthetase II [Salmonella enterica subsp.
           enterica serovar Montevideo str. 366867]
 gi|322680684|gb|EFY76722.1| tryptophanyl-tRNA synthetase II [Salmonella enterica subsp.
           enterica serovar Montevideo str. 413180]
 gi|322684422|gb|EFY80426.1| tryptophanyl-tRNA synthetase II [Salmonella enterica subsp.
           enterica serovar Montevideo str. 446600]
 gi|323194241|gb|EFZ79438.1| tryptophanyl-tRNA synthetase II [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609458-1]
 gi|323197386|gb|EFZ82526.1| tryptophanyl-tRNA synthetase II [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556150-1]
 gi|323201496|gb|EFZ86560.1| tryptophanyl-tRNA synthetase II [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609460]
 gi|323206010|gb|EFZ90972.1| tryptophanyl-tRNA synthetase II [Salmonella enterica subsp.
           enterica serovar Montevideo str. 507440-20]
 gi|323213022|gb|EFZ97824.1| tryptophanyl-tRNA synthetase II [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556152]
 gi|323215394|gb|EGA00138.1| tryptophanyl-tRNA synthetase II [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB101509-0077]
 gi|323219377|gb|EGA03862.1| tryptophanyl-tRNA synthetase II [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB102109-0047]
 gi|323226198|gb|EGA10415.1| tryptophanyl-tRNA synthetase II [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB110209-0055]
 gi|323228851|gb|EGA12980.1| tryptophanyl-tRNA synthetase II [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB111609-0052]
 gi|323236538|gb|EGA20614.1| tryptophanyl-tRNA synthetase II [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009083312]
 gi|323239962|gb|EGA24009.1| tryptophanyl-tRNA synthetase II [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009085258]
 gi|323241992|gb|EGA26021.1| tryptophanyl-tRNA synthetase II [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315731156]
 gi|323247861|gb|EGA31798.1| tryptophanyl-tRNA synthetase II [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2009159199]
 gi|323251500|gb|EGA35371.1| tryptophanyl-tRNA synthetase II [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008282]
 gi|323258134|gb|EGA41811.1| tryptophanyl-tRNA synthetase II [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008283]
 gi|323263723|gb|EGA47244.1| tryptophanyl-tRNA synthetase II [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008284]
 gi|323265683|gb|EGA49179.1| tryptophanyl-tRNA synthetase II [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008285]
 gi|323270128|gb|EGA53576.1| tryptophanyl-tRNA synthetase II [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008287]
          Length = 337

 Score = 45.6 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 35/217 (16%), Positives = 63/217 (29%), Gaps = 29/217 (13%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMR-SQEIQEN 102
            T  SLH GH    +      +  H+   L+     +       D      +    I + 
Sbjct: 13  PTG-SLHLGHYVGSLRQRVALQQDHQQYVLIADLQGL------TDNGSNPQKIRDNIPQV 65

Query: 103 IEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR 162
           +     +           T   + +    L  +  + +     +    N  +  E  +  
Sbjct: 66  LADYLAVG-----IDPALTTICLQSALPALAELTVLYMNIVTVARVERNPTVKNEIAQKG 120

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT---- 218
             R   + F    Y I QA D       +   +   G DQ   I    ++  ++ +    
Sbjct: 121 FTRSLPVGF--MAYPISQAADITA----FKAEMVPVGDDQLPMIEQTNEIVHKMNSLFSS 174

Query: 219 ---PKLFALTSPL--LTTASG-TKMGKTLSGAIWLNK 249
                  AL S    L    G  KM K+L   + L+ 
Sbjct: 175 PVLRPCQALLSDTGRLPGIDGSAKMSKSLGNTLLLSA 211


>gi|238910671|ref|ZP_04654508.1| tryptophanyl-tRNA synthetase II [Salmonella enterica subsp.
           enterica serovar Tennessee str. CDC07-0191]
          Length = 337

 Score = 45.6 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 35/217 (16%), Positives = 63/217 (29%), Gaps = 29/217 (13%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMR-SQEIQEN 102
            T  SLH GH    +      +  H+   L+     +       D      +    I + 
Sbjct: 13  PTG-SLHLGHYVGSLRQRVALQQDHQQYVLIADLQGL------TDNGSNPQKIRDNIPQV 65

Query: 103 IEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR 162
           +     +           T   + +    L  +  + +     +    N  +  E  +  
Sbjct: 66  LADYLAVG-----IDPALTTICLQSALPALAELTVLYMNIVTVARVERNPTVKNEIAQKG 120

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT---- 218
             R   + F    Y I QA D       +   +   G DQ   I    ++  ++ +    
Sbjct: 121 FTRSLPVGF--MAYPISQAADITA----FKAEMVPVGDDQLPMIEQTNEIVHKMNSLFSS 174

Query: 219 ---PKLFALTSPL--LTTASG-TKMGKTLSGAIWLNK 249
                  AL S    L    G  KM K+L   + L+ 
Sbjct: 175 PVLRPCQALLSDTGRLPGIDGSAKMSKSLGNTLLLSA 211


>gi|212690763|ref|ZP_03298891.1| hypothetical protein BACDOR_00250 [Bacteroides dorei DSM 17855]
 gi|212666640|gb|EEB27212.1| hypothetical protein BACDOR_00250 [Bacteroides dorei DSM 17855]
          Length = 243

 Score = 45.6 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 13/71 (18%), Positives = 31/71 (43%), Gaps = 1/71 (1%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           + +  + L   +  AG   S  EA   + +  + +N  +++    +IK  D     +  +
Sbjct: 3   DPNEPIRLNKFLANAGIC-SRREADEFITAGVVSVNGEVVTELGTKIKRTDEVKFHDEPV 61

Query: 405 SFGKKNHIICH 415
           S  +K +I+ +
Sbjct: 62  SIERKTYILLN 72


>gi|194445132|ref|YP_002043750.1| tryptophanyl-tRNA synthetase II [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|194403795|gb|ACF64017.1| tryptophanyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Newport str. SL254]
          Length = 337

 Score = 45.6 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 35/217 (16%), Positives = 63/217 (29%), Gaps = 29/217 (13%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMR-SQEIQEN 102
            T  SLH GH    +      +  H+   L+     +       D      +    I + 
Sbjct: 13  PTG-SLHLGHYVGSLRQRVALQQDHQQYVLIADLQGL------TDNGSNPQKIRDNIPQV 65

Query: 103 IEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR 162
           +     +           T   + +    L  +  + +     +    N  +  E  +  
Sbjct: 66  LADYLAVG-----IDPALTTICLQSALPALAELTVLYMNIVTVARVERNPTVKNEIAQKG 120

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT---- 218
             R   + F    Y I QA D       +   +   G DQ   I    ++  ++ +    
Sbjct: 121 FTRSLPVGF--MAYPISQAADITA----FKAEMVPVGDDQLPMIEQTNEIVHKMNSLFSS 174

Query: 219 ---PKLFALTSPL--LTTASG-TKMGKTLSGAIWLNK 249
                  AL S    L    G  KM K+L   + L+ 
Sbjct: 175 PVLRPCQALLSDTGRLPGIDGSAKMSKSLGNTLLLSA 211


>gi|83772447|dbj|BAE62576.1| unnamed protein product [Aspergillus oryzae]
          Length = 417

 Score = 45.6 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 40/228 (17%), Positives = 82/228 (35%), Gaps = 23/228 (10%)

Query: 18  IHQISNPRELDILC-SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGG 76
           + +I NP  ++ +   +     Y G   T    H G+    + +  L +     + L+  
Sbjct: 52  LAEILNPEIIENILIEKRNPRIYWGTATTGRP-HIGYFLAALKIAQLLRAQCDVVVLLAD 110

Query: 77  GTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA--LMLNNETWLCS 134
             + +      D  +  +  + ++   +  + I ++ ++     TD    +L +      
Sbjct: 111 VHAFL------DNLKAPL--ELVENRAQYYRKIITAILESVGVPTDKLEFVLGSSYQKSP 162

Query: 135 IKYIDLLREIGSFFSVNRMLSF--ESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYD 192
              +D+ R + S  S         E V+        LS L   Y +LQ  D   L     
Sbjct: 163 EYVMDVYR-LSSLISEGDAKKAGAEVVKQ--TENAPLSGL--LYPVLQVLDEEHLK---- 213

Query: 193 CRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
             +Q+GG DQ        +   ++   K   L +P+++   G KM  +
Sbjct: 214 VDVQLGGMDQRKLFTAATEWLPKIGYRKRAHLINPMISGLKGAKMSSS 261


>gi|320449847|ref|YP_004201943.1| tryptophane-tRNA ligase [Thermus scotoductus SA-01]
 gi|320150016|gb|ADW21394.1| tryptophane-tRNA ligase [Thermus scotoductus SA-01]
          Length = 337

 Score = 45.6 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 39/226 (17%), Positives = 73/226 (32%), Gaps = 52/226 (23%)

Query: 174 FNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSP----LL 229
             Y +LQA D + + K     +   G DQ  +I    ++  R     LF  T P    LL
Sbjct: 127 LMYPVLQAADIL-IYKADTVPV---GEDQVQHIELTREIARRFN--ALFGETFPEPEALL 180

Query: 230 -------TTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDA-------------- 267
                      G  KM K+L   I L ++     + W+  R++ D               
Sbjct: 181 NPEAPRVPGIDGKAKMSKSLGNTIGLLEDEG---SIWEKIRHLPDDPQRIRLSDPGEPGR 237

Query: 268 -DVVSFAKRLTTLPMSE-IDRMAKLQGKEINEAKKIIATEITTMVHG-REEAEKAATA-- 322
             V ++        + E +    +  G      K+I+  E+  ++   RE AE+      
Sbjct: 238 TIVFTYLSYFAPKELVEALKEEYRKAGIGTLTVKRILFEEMMKVLRPIRERAEELKKDPD 297

Query: 323 --AMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
                  + +  ++ +   ++ +     G+             S  
Sbjct: 298 YVMDALLEGAKRARAVAQATMEEVREKVGL----------LLPSKR 333


>gi|254387233|ref|ZP_05002497.1| tryptophanyl-tRNA synthetase 1 [Streptomyces sp. Mg1]
 gi|194346042|gb|EDX27008.1| tryptophanyl-tRNA synthetase 1 [Streptomyces sp. Mg1]
          Length = 337

 Score = 45.6 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 47/300 (15%), Positives = 88/300 (29%), Gaps = 53/300 (17%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTS--IIGDPSF-RDESRRMMRSQ 97
           G   T+ S H G+    +  +   +  H    ++    +  +  DP   R  +R  + + 
Sbjct: 11  GIQPTSGSFHLGNYLGAIRQYVALQETHDAFYMVVDLHAITMPQDPKDLRANTR--LSAA 68

Query: 98  EIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFE 157
           ++       +        +         + N            +   G    + +    +
Sbjct: 69  QLLAAGLDPERCTLFIQSHVPEHAQLGWVMNC-----------ITGFGEASRMTQF--KD 115

Query: 158 SVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK 217
                     ++    F Y ILQ  D + L +     +   G DQ  +I    DL ER  
Sbjct: 116 KSAKSGANNATVGL--FTYPILQVADIL-LYQANAVPV---GEDQRQHIELTRDLAERFN 169

Query: 218 TPKLFALTSPLL-------------TTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRN- 263
           T   F  T  L                    KM K+ S    L   +  P    +  ++ 
Sbjct: 170 TR--FGKTFTLPAAHIVKEVAKIYDLQDPAIKMSKSASSPKGLINLLDEPKVTEKKIKSA 227

Query: 264 IDDAD------------VVSFAKRLTTLPMSEIDRMAKL-QGKEINEAKKIIATEITTMV 310
           + D +            V +     +TL    I  + +  +GK     K  +A  +   V
Sbjct: 228 VTDTEAEIRFDTEKKPGVSNLLTIYSTLTGETIAALEERYEGKGYGALKTDLAGVMVDFV 287


>gi|261409916|ref|YP_003246157.1| tryptophanyl-tRNA synthetase [Paenibacillus sp. Y412MC10]
 gi|261286379|gb|ACX68350.1| tryptophanyl-tRNA synthetase [Paenibacillus sp. Y412MC10]
          Length = 327

 Score = 45.6 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 42/247 (17%), Positives = 85/247 (34%), Gaps = 43/247 (17%)

Query: 138 IDLLREIGSFFS-VNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQ 196
           +  L E  + F  + RM      + +   + ++S   F Y +L A D + L +     + 
Sbjct: 89  LGWLLETQAHFGELKRMTQ---FKEKSDGKDTVSSALFTYPVLMAADVL-LYQATHVPV- 143

Query: 197 MGGSDQWGNIICGIDLGERLKT--PKLFALTSPLLTTAS---------GTKMGKTLSGAI 245
             G DQ  ++    D+ ER      + FA+  P++               KM K+     
Sbjct: 144 --GDDQKQHLELTRDVAERFNNRYGRTFAVPEPIIQDIGSRVMGLDDPSKKMSKSNPNKN 201

Query: 246 WLNKEMTSPYNFWQYW-RNIDDAD------------VVSFAKRLTTLPMSEIDRMAKL-Q 291
                M +P +  + + R + D+D            V +  +  +      I  + K  +
Sbjct: 202 SCVHMMDTPEDIRKKFSRAVTDSDGQVRHDWEQKPAVSNLIEIYSVFSEEAISVIEKRYE 261

Query: 292 GKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMG 351
           G+     KK +A  +   +              E F   ++S  +  I +   + +    
Sbjct: 262 GQGYGTFKKELAEVVIEKL----------QPIQERFHEIVNSSELDRILMDGAQRASETA 311

Query: 352 LLTLIVK 358
           + TL+  
Sbjct: 312 VPTLLAA 318


>gi|254374881|ref|ZP_04990362.1| hypothetical protein FTDG_01059 [Francisella novicida GA99-3548]
 gi|151572600|gb|EDN38254.1| hypothetical protein FTDG_01059 [Francisella novicida GA99-3548]
          Length = 334

 Score = 45.6 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 22/93 (23%), Positives = 36/93 (38%), Gaps = 16/93 (17%)

Query: 166 EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL--------GERLK 217
           ++ ++   FNY +L A D +     +D  L   G DQ  +I    D+         + + 
Sbjct: 128 DKGITMGLFNYPVLMAADILM----FDADLVPVGKDQIQHIEIARDIANRFNHIYQKPVL 183

Query: 218 TPKLFALTS---PLLTTASGTKMGKTLSGAIWL 247
                ALTS     +    G KM K+    I +
Sbjct: 184 KAPQ-ALTSEDSQTILGLDGRKMSKSYDNTIAI 215


>gi|168243998|ref|ZP_02668930.1| tryptophanyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL486]
 gi|194449833|ref|YP_002048529.1| tryptophanyl-tRNA synthetase II [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|194408137|gb|ACF68356.1| tryptophanyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL476]
 gi|205336971|gb|EDZ23735.1| tryptophanyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL486]
          Length = 337

 Score = 45.6 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 35/217 (16%), Positives = 63/217 (29%), Gaps = 29/217 (13%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMR-SQEIQEN 102
            T  SLH GH    +      +  H+   L+     +       D      +    I + 
Sbjct: 13  PTG-SLHLGHYVGSLRQRVALQQDHQQYVLIADLQGL------TDNGSNPQKIRDNIPQV 65

Query: 103 IEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR 162
           +     +           T   + +    L  +  + +     +    N  +  E  +  
Sbjct: 66  LADYLAVG-----IDPALTTICLQSALPALAELTVLYMNIVTVARVERNPTVKNEIAQKG 120

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT---- 218
             R   + F    Y I QA D       +   +   G DQ   I    ++  ++ +    
Sbjct: 121 FTRSLPVGF--MAYPISQAADITA----FKAEMVPVGDDQLPMIEQTNEIVHKMNSLFSS 174

Query: 219 ---PKLFALTSPL--LTTASG-TKMGKTLSGAIWLNK 249
                  AL S    L    G  KM K+L   + L+ 
Sbjct: 175 PVLRPCQALLSDTGRLPGIDGSAKMSKSLGNTLLLSA 211


>gi|114800520|ref|YP_759250.1| tryptophanyl-tRNA synthetase [Hyphomonas neptunium ATCC 15444]
 gi|114740694|gb|ABI78819.1| tryptophanyl-tRNA synthetase [Hyphomonas neptunium ATCC 15444]
          Length = 344

 Score = 45.6 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 43/221 (19%), Positives = 77/221 (34%), Gaps = 34/221 (15%)

Query: 34  GVVTAYIGYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRR 92
           G    + G   T + LH G+    L     LQ+ GH  I  +    + I  P  +     
Sbjct: 10  GPQRVFSGVQPTGN-LHLGNYLGALKKFADLQRDGHDCIFAVVDLHA-ITMPMEKG---- 63

Query: 93  MMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNR 152
                     I   + I ++FI  G   + +++    + L  ++   +   +     V R
Sbjct: 64  --------ALISHTRQIAAAFIAAGVDPSKSIIFAQSSVLAHVELAWIFNCVARMGWVER 115

Query: 153 MLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL 212
           M  F+    +     S+    F Y +LQA D +     +   + +G  DQ  ++    D+
Sbjct: 116 MTQFKDKAGKDAERASVGL--FTYPVLQAADILAYKATH---VPVG-EDQKQHLELSRDI 169

Query: 213 GERLKTPKLFALTSP------------LLTTASGT-KMGKT 240
            ER           P            +++   GT KM K+
Sbjct: 170 AERFNREYDVPGFFPQPEPMIKGPGARIMSLKDGTKKMSKS 210


>gi|326475803|gb|EGD99812.1| tryptophanyl-tRNA synthetase [Trichophyton tonsurans CBS 112818]
          Length = 434

 Score = 45.6 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 16/61 (26%), Positives = 23/61 (37%), Gaps = 1/61 (1%)

Query: 15  RGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +  + LD          Y G   ++ +LH GH   L    WLQ     P+ +
Sbjct: 80  RGLFFSHRDFDKILDKYEKGEPFFLYTGRGPSSDALHLGHTIPLTFTKWLQDVFDVPLVI 139

Query: 74  M 74
           M
Sbjct: 140 M 140


>gi|229473321|gb|ACQ73212.1| tryptophanyl-tRNA synthetase 2 [Streptomyces griseus subsp.
           griseus]
          Length = 169

 Score = 45.6 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 24/128 (18%), Positives = 43/128 (33%), Gaps = 14/128 (10%)

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDC 193
           +   +  L  +            + +     R+ ++S L   Y + QA D +    N   
Sbjct: 27  NQLMLPFLSLVSVAELNRNPTVKDEIA--HSRQSTVSGLMLTYPVHQAADILACKGN--- 81

Query: 194 RLQMGGSDQWGNIICGIDLGERLKT--PKLF------ALTSPLLTTASGTKMGKTLSGAI 245
            +   G DQ  ++     +  R       +F        T+PLL    G KM K+   +I
Sbjct: 82  -VVPVGRDQAPHLEVTRTIARRFNERYGPVFPEPDTLFSTAPLLLGTDGGKMSKSRGNSI 140

Query: 246 WLNKEMTS 253
            L+     
Sbjct: 141 PLSATADE 148


>gi|238892881|ref|YP_002917615.1| tryptophanyl-tRNA synthetase II [Klebsiella pneumoniae NTUH-K2044]
 gi|238545197|dbj|BAH61548.1| putative tryptophanyl-tRNA synthetase [Klebsiella pneumoniae subsp.
           pneumoniae NTUH-K2044]
          Length = 335

 Score = 45.6 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 37/227 (16%), Positives = 64/227 (28%), Gaps = 27/227 (11%)

Query: 33  QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRR 92
               T   G   T   LH GH    +      +  H+   L+     +       D    
Sbjct: 2   NHPQTILTGDRPTGQ-LHLGHYVGSLRQRVALQHNHQQFILIADLQGL------TDNGSN 54

Query: 93  MMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNR 152
               +     +E +    +  I      T   + +    L  +  + +     +    N 
Sbjct: 55  PQ--KISHHILEVMADYLAVGID--PRLTTICLQSALPALAELSALYMNIVTVARVERNP 110

Query: 153 MLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL 212
            +  E  +    R   + FL   Y I QA D       +   L   G DQ   I    ++
Sbjct: 111 TVKNEIAQKGFARSLPVGFL--AYPISQAADITA----FKAELVPVGDDQLPMIEQTNEI 164

Query: 213 GERLK---TPKLFALTSPL------LTTASGT-KMGKTLSGAIWLNK 249
             ++       +      L      L    G  KM K+L   + L+ 
Sbjct: 165 VHKMNSLTGEPVLRHCKALLSEVSRLPGVDGNAKMSKSLGNTLTLSA 211


>gi|227832358|ref|YP_002834065.1| Tryptophanyl-tRNA synthetase [Corynebacterium aurimucosum ATCC
           700975]
 gi|262183782|ref|ZP_06043203.1| tryptophanyl-tRNA synthetase [Corynebacterium aurimucosum ATCC
           700975]
 gi|227453374|gb|ACP32127.1| Tryptophanyl-tRNA synthetase [Corynebacterium aurimucosum ATCC
           700975]
          Length = 344

 Score = 45.6 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 37/226 (16%), Positives = 73/226 (32%), Gaps = 31/226 (13%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   TA S H G+    +  +   +  H+    +    +I                +E++
Sbjct: 17  GIQPTADSYHLGNYLGALKQWIDLQDSHEAFYFIPDLHAIT----------VEQNPEELR 66

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
                      +       K+   + ++      + +  +L+ +  F   +RM  F+   
Sbjct: 67  HRTVAGAAQLIALG-IDPAKSTLFVQSHVPAHAELTW--VLQCLTGFGEASRMTQFKD-- 121

Query: 161 SRLKREQS-LSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             LK+ Q   S   F Y +L A D + L   +   +   G DQ  ++    +L ER    
Sbjct: 122 KSLKQGQDRTSVGLFTYPVLMAADIL-LYSPHYVPV---GEDQRQHLELTRNLAERFNNK 177

Query: 220 KLFALTSPLLTTASG-----------TKMGKTLSGAIWLNKEMTSP 254
                  P      G           +KM K+ +    +   + +P
Sbjct: 178 YGVVFRVPEAFIPEGSAKIYDLQEPTSKMSKSGANPKGIVNLLDAP 223


>gi|50842807|ref|YP_056034.1| tryptophanyl-tRNA synthetase [Propionibacterium acnes KPA171202]
 gi|282853712|ref|ZP_06263049.1| tryptophan--tRNA ligase [Propionibacterium acnes J139]
 gi|50840409|gb|AAT83076.1| tryptophanyl-tRNA synthetase [Propionibacterium acnes KPA171202]
 gi|282583165|gb|EFB88545.1| tryptophan--tRNA ligase [Propionibacterium acnes J139]
 gi|314923601|gb|EFS87432.1| tryptophan--tRNA ligase [Propionibacterium acnes HL001PA1]
 gi|314966440|gb|EFT10539.1| tryptophan--tRNA ligase [Propionibacterium acnes HL082PA2]
 gi|314983248|gb|EFT27340.1| tryptophan--tRNA ligase [Propionibacterium acnes HL110PA3]
 gi|315090091|gb|EFT62067.1| tryptophan--tRNA ligase [Propionibacterium acnes HL110PA4]
 gi|315092783|gb|EFT64759.1| tryptophan--tRNA ligase [Propionibacterium acnes HL060PA1]
 gi|315103749|gb|EFT75725.1| tryptophan--tRNA ligase [Propionibacterium acnes HL050PA2]
 gi|315105897|gb|EFT77873.1| tryptophan--tRNA ligase [Propionibacterium acnes HL030PA1]
 gi|327327262|gb|EGE69038.1| tryptophan--tRNA ligase [Propionibacterium acnes HL103PA1]
          Length = 363

 Score = 45.6 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 44/263 (16%), Positives = 75/263 (28%), Gaps = 35/263 (13%)

Query: 22  SNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSI 80
           S+  E D+           G   T  SLH GH    +     LQ  G +   ++     +
Sbjct: 22  SDKVEADLAVHPDKWRILTGDRPTG-SLHIGHYFGSLANRVRLQNKGIESFLVVADY-QV 79

Query: 81  IGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDL 140
           I D     + +  + S         I    ++        +    LN          +  
Sbjct: 80  IYDRDGVGDLQANVMSNVADYLAIGIDPTLTTIF----THSALPALN-------QLLLPF 128

Query: 141 LREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGS 200
           L  +            + +      E+ +S L   + + QA D +    N    L   G 
Sbjct: 129 LSLVTDAELRRNPTVKDELA---TSERPMSGLMLTFPVHQAADILFCKAN----LVPVGR 181

Query: 201 DQWGNIICGIDLGERLKT--------------PKLFALTSPLLTTASGTKMGKTLSGAIW 246
           DQ  +I     +  R                 P+     +P +    GTKM K+   AI 
Sbjct: 182 DQLPHIEQTRVIARRFDERYGRAEASKPVFPEPEALLSATPHVLGLDGTKMSKSKGNAIE 241

Query: 247 LNKEMTSPYNFWQYWRNIDDADV 269
           L           +  +   D  +
Sbjct: 242 LGMTADQTAKLIKKAKTDADRHI 264


>gi|310659180|ref|YP_003936901.1| isoleucyl-tRNA synthetase 2 [Clostridium sticklandii DSM 519]
 gi|308825958|emb|CBH21996.1| Isoleucyl-tRNA synthetase 2 (Isoleucine--tRNA ligase 2) (IleRS 2)
           [Clostridium sticklandii]
          Length = 1034

 Score = 45.6 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 24/113 (21%), Positives = 41/113 (36%), Gaps = 19/113 (16%)

Query: 168 SLSFLEFNYMILQAYDFVELA-KNYDCRLQMGGSDQ---WGNIICGIDLGERLKTPKLFA 223
           S+ F + +Y      +F EL   ++ C     G DQ   W   +  I      K+P    
Sbjct: 523 SMPFAQHHYPFENKENFDELFPADFICE----GIDQTRGWFYSLIAISTFVMGKSPYKNV 578

Query: 224 LTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRL 276
           L + L+    G KM K+    +        P+  +  +     ADV+ +    
Sbjct: 579 LVNDLILDKDGKKMSKSRGNTV-------DPFEMFDKY----GADVLRWYLLY 620


>gi|163839058|ref|YP_001623463.1| tryptophanyl-tRNA synthetase [Renibacterium salmoninarum ATCC
           33209]
 gi|162952534|gb|ABY22049.1| tryptophanyl-tRNA synthetase [Renibacterium salmoninarum ATCC
           33209]
          Length = 343

 Score = 45.6 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 48/297 (16%), Positives = 89/297 (29%), Gaps = 51/297 (17%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSII--GDPSFRDESRRMMRSQE 98
           G   +A SLH G+    ++ +   +  +  I ++    +I    DP      R  + + +
Sbjct: 12  GMQPSADSLHLGNYLGALVQWRKMQEEYDAIYMIVDLHAITVPQDP-GVLAQRTRVTAAQ 70

Query: 99  IQENIEKIKGIFSSFIKYGTGKTD-ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFE 157
                  ++        +    T  A +LN  T       +   ++              
Sbjct: 71  YLAGGIDVEKCTLFVQSHVPEHTQLAWVLNCLTGFGEASRMTQFKD-------------- 116

Query: 158 SVRSRLKREQSL-SFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL 216
                LK+     S   F Y ILQA D + L +     +   G DQ  ++    DL +R 
Sbjct: 117 ---KSLKQGSDTASVGLFTYPILQAADIL-LYQPEGVPV---GEDQRQHVELSRDLAKRF 169

Query: 217 KT--PKLFALTSPLLTTASGT---------KMGKTLSGAIWLNKEMTSPYNFWQYWRN-- 263
                + F +    +   S           KM K+      L   +  P    +  ++  
Sbjct: 170 NHRFGETFVVPQAFIQKESAKIQDLQNPSAKMSKSADSPNGLINLLDDPKVTAKRIKSSV 229

Query: 264 IDDADVVSF-----------AKRLTTLPMSEIDRMAKL-QGKEINEAKKIIATEITT 308
            DD   + +                 L    I ++     GK     K  +A  +  
Sbjct: 230 TDDGAEIRYDKENKPGVSNLLSIYAALSKKSIAQVEADFDGKMYGNLKVELADLVVA 286


>gi|332184607|gb|AEE26861.1| Tryptophanyl-tRNA synthetase [Francisella cf. novicida 3523]
          Length = 334

 Score = 45.6 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 22/93 (23%), Positives = 36/93 (38%), Gaps = 16/93 (17%)

Query: 166 EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL--------GERLK 217
           ++ ++   FNY +L A D +     +D  L   G DQ  +I    D+         + + 
Sbjct: 128 DKGITMGLFNYPVLMAADILM----FDADLVPVGKDQIQHIEIARDIANRFNHIYQKSVL 183

Query: 218 TPKLFALTS---PLLTTASGTKMGKTLSGAIWL 247
                ALTS     +    G KM K+    I +
Sbjct: 184 KAPQ-ALTSEDSQTILGLDGRKMSKSYDNTIAI 215


>gi|301168167|emb|CBW27756.1| tryptophanyl-tRNA synthetase [Bacteriovorax marinus SJ]
          Length = 333

 Score = 45.6 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 34/160 (21%), Positives = 52/160 (32%), Gaps = 32/160 (20%)

Query: 166 EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALT 225
           +  ++   + Y IL A D + L  N    + +G  DQ  +I    D+            T
Sbjct: 128 DHGVNMGIYTYPILMACDILFLKSN---IVPVGA-DQLQHIEIARDIASAFNYVYGDVFT 183

Query: 226 SP--------LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNI------------- 264
            P        L+    G KM K+    I L      P    +   N              
Sbjct: 184 LPEAKAQEGALVPGLDGRKMSKSYGNHIPL----FLPEKKLRKTINKITTDTSAPEDPKN 239

Query: 265 -DDADVVSFAKRL-TTLPMSEIDRMAKLQGKEINEAKKII 302
            DD+ V    K   T   ++E+D   +  G    EAK  +
Sbjct: 240 PDDSLVFDLYKFFATEEQVTELDAWYRR-GIGWGEAKLEL 278


>gi|237804936|ref|YP_002889090.1| tryptophanyl-tRNA synthetase [Chlamydia trachomatis B/TZ1A828/OT]
 gi|231273236|emb|CAX10149.1| tryptophanyl-tRNA synthetase [Chlamydia trachomatis B/TZ1A828/OT]
          Length = 346

 Score = 45.6 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 42/234 (17%), Positives = 84/234 (35%), Gaps = 35/234 (14%)

Query: 44  LTASSLHAGHLTQ-LMLLFWLQ-KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +M    LQ  + +    ++    ++        ++R+    +EI +
Sbjct: 12  PTGK-LHLGHWIGSIMNRLQLQNDSRYDCFFIIADLHTL------TTKTRK----EEILQ 60

Query: 102 NIEKIKGIFSSFIKYG-TGKTDALMLNNE--TWLCSIKYIDLLREIGSFFSVNRMLSFES 158
               I  + + ++  G   +  A+ L +             +L  +     +      E 
Sbjct: 61  IDNHIYDVLADWLSVGIDPEKSAIYLQSAIPEIYELNLIFSMLTPL--NHIMGIPSIKEM 118

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
            R+    E+SLS     Y +LQ+ D + LAK +   +   G D   ++    D+ +    
Sbjct: 119 ARNASLNEESLSHGLIGYPVLQSADIL-LAKAHLVPV---GKDNEAHVELTRDIAKTFNR 174

Query: 219 PKLFALTSP----------LLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYW 261
             L+    P           L   +G  KM K+ + AI+L+ +  +     +  
Sbjct: 175 --LYGEVFPEPDILQGELTALVGTNGQGKMSKSANNAIYLSDDAKTVQEKIRKL 226


>gi|15605314|ref|NP_220100.1| tryptophanyl-tRNA synthetase [Chlamydia trachomatis D/UW-3/CX]
 gi|76789322|ref|YP_328408.1| tryptophanyl-tRNA synthetase [Chlamydia trachomatis A/HAR-13]
 gi|237803014|ref|YP_002888208.1| tryptophanyl-tRNA synthetase [Chlamydia trachomatis B/Jali20/OT]
 gi|255311405|ref|ZP_05353975.1| tryptophanyl-tRNA synthetase [Chlamydia trachomatis 6276]
 gi|255317706|ref|ZP_05358952.1| tryptophanyl-tRNA synthetase [Chlamydia trachomatis 6276s]
 gi|6226201|sp|O84589|SYW_CHLTR RecName: Full=Tryptophanyl-tRNA synthetase; AltName:
           Full=Tryptophan--tRNA ligase; Short=TrpRS
 gi|3329028|gb|AAC68187.1| Tryptophanyl tRNA Synthetase [Chlamydia trachomatis D/UW-3/CX]
 gi|76167852|gb|AAX50860.1| tryptophanyl-tRNA synthetase [Chlamydia trachomatis A/HAR-13]
 gi|231274248|emb|CAX11042.1| tryptophanyl-tRNA synthetase [Chlamydia trachomatis B/Jali20/OT]
 gi|296436119|gb|ADH18293.1| tryptophanyl-tRNA synthetase [Chlamydia trachomatis G/9768]
 gi|296437048|gb|ADH19218.1| tryptophanyl-tRNA synthetase [Chlamydia trachomatis G/11222]
 gi|296437979|gb|ADH20140.1| tryptophanyl-tRNA synthetase [Chlamydia trachomatis G/11074]
 gi|297140481|gb|ADH97239.1| tryptophanyl-tRNA synthetase [Chlamydia trachomatis G/9301]
 gi|297748715|gb|ADI51261.1| Tryptophanyl-tRNA synthetase [Chlamydia trachomatis D-EC]
 gi|297749595|gb|ADI52273.1| Tryptophanyl-tRNA synthetase [Chlamydia trachomatis D-LC]
          Length = 346

 Score = 45.6 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 42/234 (17%), Positives = 84/234 (35%), Gaps = 35/234 (14%)

Query: 44  LTASSLHAGHLTQ-LMLLFWLQ-KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +M    LQ  + +    ++    ++        ++R+    +EI +
Sbjct: 12  PTGK-LHLGHWIGSIMNRLQLQNDSRYDCFFIIADLHTL------TTKTRK----EEILQ 60

Query: 102 NIEKIKGIFSSFIKYG-TGKTDALMLNNE--TWLCSIKYIDLLREIGSFFSVNRMLSFES 158
               I  + + ++  G   +  A+ L +             +L  +     +      E 
Sbjct: 61  IDNHIYDVLADWLSVGIDPEKSAIYLQSAIPEIYELNLIFSMLTPL--NHIMGIPSIKEM 118

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
            R+    E+SLS     Y +LQ+ D + LAK +   +   G D   ++    D+ +    
Sbjct: 119 ARNASLNEESLSHGLIGYPVLQSADIL-LAKAHLVPV---GKDNEAHVELTRDIAKTFNR 174

Query: 219 PKLFALTSP----------LLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYW 261
             L+    P           L   +G  KM K+ + AI+L+ +  +     +  
Sbjct: 175 --LYGEVFPEPDILQGELTALVGTNGQGKMSKSANNAIYLSDDAKTVQEKIRKL 226


>gi|218133636|ref|ZP_03462440.1| hypothetical protein BACPEC_01505 [Bacteroides pectinophilus ATCC
           43243]
 gi|217991011|gb|EEC57017.1| hypothetical protein BACPEC_01505 [Bacteroides pectinophilus ATCC
           43243]
          Length = 366

 Score = 45.6 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 40/239 (16%), Positives = 72/239 (30%), Gaps = 41/239 (17%)

Query: 44  LTASSLHAGHLTQLMLLFW---LQKTGH--KPISLMGGGTSIIGDPSFRDESRRMMRSQE 98
            T   LH GH      L     LQ +G   K   ++    ++  +    ++ R+      
Sbjct: 15  PTGR-LHVGHYAG--SLRRRVELQNSGDYDKVYIMIADAQALTDNADNPEKVRQ-----N 66

Query: 99  IQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
           I E                  K+   + +    LC +     +  +              
Sbjct: 67  IVEVALDYMACG-----LDPAKSIIFIQSQIPELCELTMY-YMNLVTVSRLQRNPTVKNE 120

Query: 159 VRSR-LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK 217
           ++ R  +      F  F Y I QA D           +  G  DQ   +    ++  +  
Sbjct: 121 IKMRNFEASIPTGF--FCYPISQASDITAFKA---TTVPAG-EDQMPMVEQTKEIVHKFN 174

Query: 218 TPKLFALTSP-----------LLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNI 264
           +     LT P            L    G  KM K+L   I+L++E   P +  +   ++
Sbjct: 175 STYGEVLTDPDILLPDNEACLRLPGIDGKAKMSKSLGNCIYLSEE---PEDIKKKVMSM 230


>gi|118498068|ref|YP_899118.1| tryptophanyl-tRNA synthetase [Francisella tularensis subsp.
           novicida U112]
 gi|194323293|ref|ZP_03057077.1| tryptophanyl-tRNA synthetase [Francisella tularensis subsp.
           novicida FTE]
 gi|118423974|gb|ABK90364.1| tryptophanyl-tRNA synthetase [Francisella novicida U112]
 gi|194322657|gb|EDX20137.1| tryptophanyl-tRNA synthetase [Francisella tularensis subsp.
           novicida FTE]
          Length = 334

 Score = 45.6 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 22/93 (23%), Positives = 36/93 (38%), Gaps = 16/93 (17%)

Query: 166 EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL--------GERLK 217
           ++ ++   FNY +L A D +     +D  L   G DQ  +I    D+         + + 
Sbjct: 128 DKGITMGLFNYPVLMAADILM----FDADLVPVGKDQIQHIEIARDIANRFNHIYQKPVL 183

Query: 218 TPKLFALTS---PLLTTASGTKMGKTLSGAIWL 247
                ALTS     +    G KM K+    I +
Sbjct: 184 KAPQ-ALTSEDSQTILGLDGRKMSKSYDNTIAI 215


>gi|301096589|ref|XP_002897391.1| tyrosyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
 gi|262107082|gb|EEY65134.1| tyrosyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
          Length = 765

 Score = 45.6 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 39/242 (16%), Positives = 85/242 (35%), Gaps = 30/242 (12%)

Query: 12  LSERGFIH-----QISNPRELDILCSQGVVTA-YIGYDLTASSLHA--GHL--TQLMLLF 61
           L ER  +      +     EL+ L  +      Y G++ +   +H   G L    +  L 
Sbjct: 420 LEERYAVARSVGEECIQENELEDLLEKKDHPVCYDGFEPSGR-MHIAQGVLRTVNVNKL- 477

Query: 62  WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKT 121
                G      +    +++ +    D  +  M  Q + E  + +    ++ +++     
Sbjct: 478 --TSAGSVFRFWVADWFAMLNNKMGGDLDKIRMVGQYMVEIWKSVGMDMTN-VEFLWASH 534

Query: 122 DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA 181
             +  +   WL  +       +I    ++ R L   ++  R K ++ +   +  Y ++Q 
Sbjct: 535 KIISHSGSYWLRVM-------DIARRTTIARTLKCCTIMGR-KEKEGMQAAQILYPLMQC 586

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDL--GERLKTPKLFALTSPLLTTASGT-KMG 238
            D   L  +  C+L   G DQ    +   D     +++   +      L+    G  KM 
Sbjct: 587 ADIFNLKADI-CQL---GIDQRKINMLARDYCDQAKIRFKPIILSHHMLMGLKEGQEKMS 642

Query: 239 KT 240
           K+
Sbjct: 643 KS 644


>gi|156841474|ref|XP_001644110.1| hypothetical protein Kpol_505p29 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156114745|gb|EDO16252.1| hypothetical protein Kpol_505p29 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 482

 Score = 45.6 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 22/120 (18%), Positives = 41/120 (34%), Gaps = 15/120 (12%)

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLT---- 354
           +K  A + T   HG    E         F   + S      S+    V     LL     
Sbjct: 44  QKWTAKQETRSYHGEHIREG---RWQSMFQSKLDSVAQLDASLRGSAVQETPFLLQTYSV 100

Query: 355 -------LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD-FDSTGNIKLSF 406
                   + ++ FA+S  +AR+ +    + +N + + +    +K  D F+    + L  
Sbjct: 101 LEKRLDFALFRSMFASSIRQARQFIIHGNVYVNGTKVKHPGYTLKPGDMFNVKPEMVLKA 160


>gi|73963987|ref|XP_868547.1| PREDICTED: similar to Tryptophanyl-tRNA synthetase
           (Tryptophan--tRNA ligase) (TrpRS) (IFP53) (hWRS) isoform
           3 [Canis familiaris]
          Length = 476

 Score = 45.6 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 40/248 (16%), Positives = 85/248 (34%), Gaps = 31/248 (12%)

Query: 15  RGFIHQISN-PRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +  + LD   ++     Y G   ++ ++H GHL   +   WLQ   + P+ +
Sbjct: 139 RGIFFSHRDMNQILDAYENKKPFYLYTGRGPSSEAMHVGHLIPFIFTKWLQDVFNVPLVI 198

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                         D+ + + +   + +            I  G       + ++  ++ 
Sbjct: 199 -----------QMTDDEKYLWKDLTLDQAYGYAVENAKDIIACGFDIKKTFIFSDLDYMG 247

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA-----YDFVELA 188
                   + +     + + ++F  V+       S S  + ++  +QA       F ++ 
Sbjct: 248 --TCPGFYKNV---VKIQKHVTFNQVKGIFGFTDSDSIGKISFPAIQAAPSFSNSFPQIF 302

Query: 189 K---NYDCRLQMGGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTASGTKMGKTLS 242
           +   +  C +     DQ        D+  R+  PK   L +   P L  A  TKM  +  
Sbjct: 303 RDRTDIQCLIPC-AIDQDPYFRMTRDVAPRIGYPKPALLHSTFFPALQGAQ-TKMSASDP 360

Query: 243 G-AIWLNK 249
             +I+L  
Sbjct: 361 NSSIFLTD 368


>gi|310795090|gb|EFQ30551.1| tryptophanyl-tRNA synthetase [Glomerella graminicola M1.001]
          Length = 489

 Score = 45.6 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 25/127 (19%), Positives = 46/127 (36%), Gaps = 13/127 (10%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSF 86
           LD +  +     Y G   ++ S+H GH+    L  WL      P+ +M     +  D  F
Sbjct: 97  LDRVEKKEPFFIYTGRGPSSDSMHIGHVIPFQLTKWLSDVLDAPLVIM-----MTDDEKF 151

Query: 87  -RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIG 145
              E R     +E+Q      +      I  G       + ++  ++    Y ++ R + 
Sbjct: 152 LFSEKR---TVEEVQHYT---RENAKDIIAIGFNPERTFIFSDYDYMGGAFYRNITR-VA 204

Query: 146 SFFSVNR 152
              +VN 
Sbjct: 205 KRITVNT 211


>gi|15835488|ref|NP_297247.1| tryptophanyl-tRNA synthetase [Chlamydia muridarum Nigg]
 gi|270285669|ref|ZP_06195063.1| tryptophanyl-tRNA synthetase [Chlamydia muridarum Nigg]
 gi|270289677|ref|ZP_06195979.1| tryptophanyl-tRNA synthetase [Chlamydia muridarum Weiss]
 gi|301337064|ref|ZP_07225266.1| tryptophanyl-tRNA synthetase [Chlamydia muridarum MopnTet14]
 gi|13878796|sp|Q9PJF5|SYW_CHLMU RecName: Full=Tryptophanyl-tRNA synthetase; AltName:
           Full=Tryptophan--tRNA ligase; Short=TrpRS
 gi|7190902|gb|AAF39670.1| tryptophanyl-tRNA synthetase [Chlamydia muridarum Nigg]
          Length = 346

 Score = 45.6 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 41/234 (17%), Positives = 82/234 (35%), Gaps = 35/234 (14%)

Query: 44  LTASSLHAGHLTQ-LMLLFWLQKT-GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +M    LQ    +    ++    ++        ++R+    +E+  
Sbjct: 12  PTGK-LHLGHWIGSIMNRLQLQNDPRYDCFFIIADLHTL------TTKTRK----EEVLH 60

Query: 102 NIEKIKGIFSSFIKYG-TGKTDALMLNNE--TWLCSIKYIDLLREIGSFFSVNRMLSFES 158
               I  + + ++  G   +  A+ L +             +L  +     +      E 
Sbjct: 61  IDSHIYDVLADWLSVGIDPEKSAIYLQSAIPEIYELNLLFSMLTPL--NHIMGIPSIKEM 118

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
            R+    E+SLS     Y +LQ+ D + LAK +   +   G D   ++    D+ +    
Sbjct: 119 ARNASINEESLSHGLIGYPVLQSADIL-LAKAHLVPV---GKDNEAHVELTRDIAKTFNR 174

Query: 219 PKLFALTSP-----------LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYW 261
             L+    P           L+ T    KM K+ + AI+L+ +  +     +  
Sbjct: 175 --LYGSVFPEPDILQGELTSLVGTNGQGKMSKSANNAIYLSDDEKTVQEKIRKM 226


>gi|229816948|ref|ZP_04447230.1| hypothetical protein BIFANG_02199 [Bifidobacterium angulatum DSM
           20098]
 gi|229785693|gb|EEP21807.1| hypothetical protein BIFANG_02199 [Bifidobacterium angulatum DSM
           20098]
          Length = 366

 Score = 45.6 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 45/303 (14%), Positives = 91/303 (30%), Gaps = 49/303 (16%)

Query: 22  SNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSI 80
           S+    +I  + G  T   G   T   LH GH    +     +Q  G     ++      
Sbjct: 28  SDATLAEIEKNPGKFTMLTGDRPTGR-LHMGHYFGTLRSRVEMQNKGVHTNIIIADY--- 83

Query: 81  IGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY----GTGKTDALMLNNETWLCSIK 136
                      +++  ++  E+I+    + +  + Y       +   +  ++     +  
Sbjct: 84  -----------QVITDRDTTEHIQ--DNVLNLILDYMAAGIDPEKTMIYTHSSVPAENQL 130

Query: 137 YIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQ 196
            +  L  +              +        +L+ L   Y + QA D   L    +    
Sbjct: 131 MLPFLSLVTESELHRNPTVKAEME---ASGHALTGLLLTYPVHQACD--ILFCKGNIV-- 183

Query: 197 MGGSDQWGNIICGIDLGERLKT-----------PKLFALTSPLLTTASGTKMGKTLSGAI 245
             G DQ  +I     +  R              P      +P +    G KM K+   +I
Sbjct: 184 PVGKDQLPHIELTRTIARRFNERYAKKNPVFPEPDAILSDAPEIPGLDGQKMSKSRGNSI 243

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPM--SEIDRMAKLQGKEINEAKKIIA 303
            L+          +   +  D++     +R+T  P+   E+  +            + IA
Sbjct: 244 MLSATAQETAKLIKK--SRTDSE-----RRITFDPINRPEVSALLTTAALTTGRKPEEIA 296

Query: 304 TEI 306
            EI
Sbjct: 297 EEI 299


>gi|171186115|ref|YP_001795034.1| tryptophanyl-tRNA synthetase [Thermoproteus neutrophilus V24Sta]
 gi|170935327|gb|ACB40588.1| tryptophanyl-tRNA synthetase [Thermoproteus neutrophilus V24Sta]
          Length = 377

 Score = 45.6 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 18/81 (22%), Positives = 29/81 (35%), Gaps = 3/81 (3%)

Query: 12  LSERGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWL-QKTGHK 69
           L  RGF +   +   +     +G     Y G   +   +H GH+   +LL W   K G +
Sbjct: 51  LIRRGFFYAHRDFDAILKWHGEGKPWALYTGRGPSGP-VHIGHMVPWILLKWFSDKFGLE 109

Query: 70  PISLMGGGTSIIGDPSFRDES 90
               M        DP  + + 
Sbjct: 110 VYFQMTDDEKFYDDPDMKLDE 130


>gi|109084876|ref|XP_001105725.1| PREDICTED: tryptophanyl-tRNA synthetase, cytoplasmic isoform 9
           [Macaca mulatta]
 gi|109084878|ref|XP_001105786.1| PREDICTED: tryptophanyl-tRNA synthetase, cytoplasmic isoform 10
           [Macaca mulatta]
 gi|109084882|ref|XP_001105926.1| PREDICTED: tryptophanyl-tRNA synthetase, cytoplasmic isoform 12
           [Macaca mulatta]
          Length = 475

 Score = 45.6 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 39/248 (15%), Positives = 82/248 (33%), Gaps = 31/248 (12%)

Query: 15  RGFIHQISN-PRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +  + LD   ++     Y G   ++ ++H GHL   +   WLQ   + P+ +
Sbjct: 138 RGIFFSHRDMNQVLDAYENKKPFYLYTGRGPSSEAMHVGHLIPFIFTKWLQDVFNVPLVI 197

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                         D+ + + +   + +            I  G       + ++  ++ 
Sbjct: 198 -----------QMTDDEKYLWKDLTLDQAYGYAVENAKDIIACGFDINKTFIFSDLDYMG 246

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA--------YDFV 185
                   + +     + + ++F  V+       S S  + ++  +QA            
Sbjct: 247 --MSSGFYKNV---VKIQKHVTFNQVKGIFGFTDSDSIGKISFPAIQAAPSFSNSFPQIF 301

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTASGTKMGKTLS 242
           +   +  C +     DQ        D+  R+  PK   L +   P L  A  TKM  +  
Sbjct: 302 QDRTDIQCLIPC-AIDQDPYFRMTRDVAPRIGYPKPALLHSTFFPALQGAQ-TKMSASDP 359

Query: 243 G-AIWLNK 249
             +I+L  
Sbjct: 360 NSSIFLTD 367


>gi|46110935|ref|XP_382525.1| hypothetical protein FG02349.1 [Gibberella zeae PH-1]
          Length = 365

 Score = 45.6 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 42/268 (15%), Positives = 93/268 (34%), Gaps = 39/268 (14%)

Query: 4   FKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL 63
            K++   IL+      +I +   L+    +  +  Y G   T    H G+L  ++ +  L
Sbjct: 10  IKANLAEILN-----SEIIDNVVLNE---KRPLEIYWGTATTGKP-HCGYLVPMVKIAEL 60

Query: 64  QKTGHKPISLMGGGTSI---IGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK---YG 117
            + G +   L+     +   +G P+           Q I    +  + +  S ++     
Sbjct: 61  LEAGCRVKILIADVHGLFDSVGVPA-----------QLISHRCDYYQFVIKSLLRAIGVS 109

Query: 118 TGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYM 177
           T + + ++  +  W           ++GS  S +     ++    +K++ +      NY 
Sbjct: 110 TDRLEFVIGGSFQWDRQYTMDR--SQMGSTTSFST--ERKACSEVVKQDDNPDVTSLNYP 165

Query: 178 ILQAYDFVELAKNYDCRLQMGGSDQWGNIICGID-LGERLKTPKLFALTSPLLTTASGTK 236
           I+Q  D   L        ++GG DQ       ++ L +     +   +   +       K
Sbjct: 166 IMQVLDEEYLK----VDAELGGVDQRKIFTFALENLPKLGYKKRAHLMNVLVPGLGQAQK 221

Query: 237 MGKTLSGA-IWLNKEMTSPYNFWQYWRN 263
           M  +   + I L   + +P    +  R 
Sbjct: 222 MSSSDPNSKIGL---LNTPEEVSKKIRK 246


>gi|302407045|ref|XP_003001358.1| tryptophanyl-tRNA synthetase [Verticillium albo-atrum VaMs.102]
 gi|261359865|gb|EEY22293.1| tryptophanyl-tRNA synthetase [Verticillium albo-atrum VaMs.102]
          Length = 479

 Score = 45.6 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 27/143 (18%), Positives = 50/143 (34%), Gaps = 14/143 (9%)

Query: 12  LSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           L  RG +    +    LD    +     Y G   ++ S+H GH+    L  WL      P
Sbjct: 80  LLRRGVVFSHRDLDLILDRYEKKLPFFIYTGRGPSSDSMHIGHVIPFTLTKWLSDVLDAP 139

Query: 71  ISLMGGGTSIIGDPSF-RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
           + +M     +  D  F   E R       ++E     K      +  G       + N+ 
Sbjct: 140 LVIM-----MTDDEKFLFSEKR------TVEEVKGYTKSNAKDILAIGFNPDRTFLFNDY 188

Query: 130 TWLCSIKYIDLLREIGSFFSVNR 152
            ++   K+ + + ++    +VN 
Sbjct: 189 DYVGG-KFYETISKVSKRITVNT 210


>gi|255011767|ref|ZP_05283893.1| ribosomal large subunit pseudouridine synthase B [Bacteroides
           fragilis 3_1_12]
 gi|313149605|ref|ZP_07811798.1| ribosomal large subunit pseudouridine synthase B [Bacteroides
           fragilis 3_1_12]
 gi|313138372|gb|EFR55732.1| ribosomal large subunit pseudouridine synthase B [Bacteroides
           fragilis 3_1_12]
          Length = 466

 Score = 45.6 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 12/71 (16%), Positives = 31/71 (43%), Gaps = 1/71 (1%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           + +  + L   +  AG   S  EA   + +  + +N  +++    +IK  D     +  +
Sbjct: 226 DPNEPIRLNKFLANAGVC-SRREADEFITAGVVSVNGEVVTELGTKIKRADVVKFHDETV 284

Query: 405 SFGKKNHIICH 415
           S  +K +++ +
Sbjct: 285 SIERKVYVLLN 295


>gi|60683236|ref|YP_213380.1| putative ribosomal large subunit pseudouridine synthase
           [Bacteroides fragilis NCTC 9343]
 gi|60494670|emb|CAH09471.1| putative ribosomal large subunit pseudouridine synthase
           [Bacteroides fragilis NCTC 9343]
          Length = 466

 Score = 45.6 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 12/71 (16%), Positives = 31/71 (43%), Gaps = 1/71 (1%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           + +  + L   +  AG   S  EA   + +  + +N  +++    +IK  D     +  +
Sbjct: 226 DPNEPIRLNKFLANAGVC-SRREADEFITAGVVSVNGEVVTELGTKIKRADVVKFHDETV 284

Query: 405 SFGKKNHIICH 415
           S  +K +++ +
Sbjct: 285 SIERKVYVLLN 295


>gi|53715301|ref|YP_101293.1| ribosomal large subunit pseudouridine synthase B [Bacteroides
           fragilis YCH46]
 gi|253567192|ref|ZP_04844642.1| ribosomal large subunit pseudouridine synthase B [Bacteroides sp.
           3_2_5]
 gi|265767788|ref|ZP_06095320.1| ribosomal large subunit pseudouridine synthase B [Bacteroides sp.
           2_1_16]
 gi|52218166|dbj|BAD50759.1| ribosomal large subunit pseudouridine synthase B [Bacteroides
           fragilis YCH46]
 gi|251944023|gb|EES84542.1| ribosomal large subunit pseudouridine synthase B [Bacteroides sp.
           3_2_5]
 gi|263252460|gb|EEZ23988.1| ribosomal large subunit pseudouridine synthase B [Bacteroides sp.
           2_1_16]
 gi|301164755|emb|CBW24314.1| putative ribosomal large subunit pseudouridine synthase
           [Bacteroides fragilis 638R]
          Length = 466

 Score = 45.6 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 12/71 (16%), Positives = 31/71 (43%), Gaps = 1/71 (1%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           + +  + L   +  AG   S  EA   + +  + +N  +++    +IK  D     +  +
Sbjct: 226 DPNEPIRLNKFLANAGVC-SRREADEFITAGVVSVNGEVVTELGTKIKRADVVKFHDETV 284

Query: 405 SFGKKNHIICH 415
           S  +K +++ +
Sbjct: 285 SIERKVYVLLN 295


>gi|289579910|ref|YP_003478376.1| ribosomal protein S4E, central domain protein [Natrialba magadii
           ATCC 43099]
 gi|289529463|gb|ADD03814.1| Ribosomal protein S4E, central domain protein [Natrialba magadii
           ATCC 43099]
          Length = 235

 Score = 45.6 bits (107), Expect = 0.017,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 1/53 (1%)

Query: 347 SRGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
             G+ L+ L+    G+  S  EAR  L  ++I +N   I++E+  I + D  +
Sbjct: 34  EEGVPLVVLLRDVLGYVDSKKEARYALSQDSILVNGEPINDEQRPIGIFDIIA 86


>gi|195135639|ref|XP_002012240.1| GI16545 [Drosophila mojavensis]
 gi|193918504|gb|EDW17371.1| GI16545 [Drosophila mojavensis]
          Length = 528

 Score = 45.6 bits (107), Expect = 0.017,   Method: Composition-based stats.
 Identities = 56/308 (18%), Positives = 94/308 (30%), Gaps = 39/308 (12%)

Query: 2   PAFKSDFLSILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF 61
               +D    L  R    +     +L  +  +  +  Y G   T    H  +   +  + 
Sbjct: 4   TTLSADEKKKLITRNL-QETLGDDKLTKILQERDLKIYWGTATTGKP-HVAYFVPMSKIA 61

Query: 62  WLQKTGHKPISLMGGGTSII---GDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT 118
              K G +   L     + +     P    E R     Q I+  +  I       +K+  
Sbjct: 62  DFLKAGCEVTILFADLHAYLDNMKAPWPLLELRTKYYEQVIKAMLRSIDVPLDK-LKFVK 120

Query: 119 GKTDALMLNNETWLCSIKYIDLLREIGSFFSV--NRMLSFESVRSRLKREQSLSFLEFNY 176
           G            L     +D+ + + S  ++   +    E V+   + E  L      Y
Sbjct: 121 GSDYQ--------LSKEYTLDVYK-LSSLVTIHDAKKAGAEVVK---QVEFPL-LSCLLY 167

Query: 177 MILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTK 236
             LQ  D   L        Q GG DQ            +L   K     +P++   +G K
Sbjct: 168 PGLQGLDEEYLK----VDAQFGGVDQRKIFTFSEKYLPQLGYEKRIHFMNPMVPGLAGGK 223

Query: 237 MGKTLSGAIWLNKEMTSPYNFWQYWR-------NIDDADVVSFAK-----RLTTLPMSEI 284
           M  +   +      + SP N  +  +       NI D  ++SF K             EI
Sbjct: 224 MSSSEEDS--KIDLLDSPANVKKKLKKAFCEPGNIADNGLLSFVKHVLFSLFKDGEGFEI 281

Query: 285 DRMAKLQG 292
           +R A   G
Sbjct: 282 NRAADNGG 289


>gi|41614911|ref|NP_963409.1| tryptophanyl-tRNA synthetase [Nanoarchaeum equitans Kin4-M]
 gi|40068635|gb|AAR38970.1| NEQ115 [Nanoarchaeum equitans Kin4-M]
          Length = 377

 Score = 45.6 bits (107), Expect = 0.017,   Method: Composition-based stats.
 Identities = 42/243 (17%), Positives = 82/243 (33%), Gaps = 26/243 (10%)

Query: 12  LSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           L ER   +   +    L           Y G   +   +H GHL   +L  W Q+     
Sbjct: 47  LIERNIFYAHRDLDLVLKDYEEGRGFFLYTGIAPSKGKMHIGHLVPFILTRWFQEKF--- 103

Query: 71  ISLMGGGTSIIGDP-SFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
                     I  P   +  ++++   +E++  I+++   + + + +   KT   +  N 
Sbjct: 104 -----DVNVYIMFPDEEKYWAKKVDDYKEVRRKIKEMHAKYIAALGFDPDKTFMFI--NS 156

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
            ++  +    +   I    ++++  +             L F    Y +LQ        K
Sbjct: 157 EYIKHLYSAAI--PIARHINLSQ--ARAVFGFNDSTSVGLVF----YTVLQIVPTFFENK 208

Query: 190 NYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG--TKMGKTLSG-AIW 246
                L   G DQ        D+  +L   K   + S ++    G  TKM  +    AI+
Sbjct: 209 R---PLIPAGIDQDPYFRLQRDIAPKLNKYKAAEILSKMIWGLRGPYTKMSSSDPDSAIF 265

Query: 247 LNK 249
           L+ 
Sbjct: 266 LDD 268


>gi|89070784|ref|ZP_01158037.1| RNA pseudouridylate synthase family protein [Oceanicola granulosus
           HTCC2516]
 gi|89043626|gb|EAR49833.1| RNA pseudouridylate synthase family protein [Oceanicola granulosus
           HTCC2516]
          Length = 279

 Score = 45.6 bits (107), Expect = 0.017,   Method: Composition-based stats.
 Identities = 10/54 (18%), Positives = 23/54 (42%), Gaps = 1/54 (1%)

Query: 344 DEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
            +   G  +  ++ + G   S  EA R +++  + +N  +I +  L +   D  
Sbjct: 2   SDEHAGERIAKILSRRG-VASRREAERMIEAGRVSVNGRLIDSPALNVTTSDRI 54


>gi|308446218|ref|XP_003087124.1| hypothetical protein CRE_30355 [Caenorhabditis remanei]
 gi|308261296|gb|EFP05249.1| hypothetical protein CRE_30355 [Caenorhabditis remanei]
          Length = 335

 Score = 45.6 bits (107), Expect = 0.017,   Method: Composition-based stats.
 Identities = 53/355 (14%), Positives = 103/355 (29%), Gaps = 70/355 (19%)

Query: 30  LCSQGVVTAYIGYDLTASSLHAGHLTQLML----LFWLQKTGHKPISLMGGGTSIIGDPS 85
           + S      + G   ++ SL  G+    +     +          ++L     ++  DP+
Sbjct: 1   MTSHTKPVLFSGMQPSSDSLQLGNYIGALTQWVNMQQSFDAFFCVVNL--HAITVPQDPA 58

Query: 86  FRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIG 145
                 R   +Q I   I+  +       +       A +LN  T               
Sbjct: 59  ELAARTRRTAAQYIAAGIDPERSTLFVQSQVSAHTELAWVLNTITGFGE----------- 107

Query: 146 SFFSVNRMLS-FESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWG 204
                +RM    +  +       S+    F Y IL A D + L +     +   G DQ  
Sbjct: 108 ----ASRMTQFKDKSQKHGADASSVGL--FTYPILMAADIL-LYQTDIVPV---GEDQRQ 157

Query: 205 NIICGIDL-----------------GERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
           ++    DL                   +  T K++ L +P        KM K+      L
Sbjct: 158 HVELTRDLATRFNSRFGDTFVVPEAQIQKGTAKVYDLQNP------EAKMSKSAESEAGL 211

Query: 248 NKEMTSPYNFWQYWRN-IDDAD------------VVSFAKRLTTLPMSEIDRMAKL-QGK 293
            K +       +     + DAD            V +     + L    I+ + +  +G+
Sbjct: 212 IKVLDPANVTRKKIMRAVTDADGEIRYDRENKPGVSNLLTIYSVLTGRMIESIEQEFEGR 271

Query: 294 EINEAKKIIATEITTMV-----HGREEAEKAATAAMECFDMSIHSQHMPTISISK 343
              + KK +A  +            E     A         +  +  + T ++ +
Sbjct: 272 GYGDLKKALAEVVDETFTPIRERTEELLADPAELDRLLAKGADRANEVATATLDR 326


>gi|145298159|ref|YP_001141000.1| tryptophanyl-tRNA synthetase [Aeromonas salmonicida subsp.
           salmonicida A449]
 gi|142850931|gb|ABO89252.1| tryptophanyl-tRNA synthetase [Aeromonas salmonicida subsp.
           salmonicida A449]
          Length = 334

 Score = 45.6 bits (107), Expect = 0.017,   Method: Composition-based stats.
 Identities = 38/201 (18%), Positives = 72/201 (35%), Gaps = 39/201 (19%)

Query: 140 LLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGG 199
           +L        ++RM  F+   +R +   ++    F Y +L A D + L +     +   G
Sbjct: 94  ILNCYTQMGELSRMTQFKDKSARFENNVNVGL--FGYPVLMAADIL-LYQANQVPV---G 147

Query: 200 SDQWGNIICGIDLGERLKT--PKLFALTSPLLTTASG----------TKMGKTLSGAIWL 247
           +DQ  ++    D+  R      ++F L  P + T  G           KM K+       
Sbjct: 148 NDQKQHLELTRDICTRFNNLYGEVFTLPEPFIPT-DGARVMSLQDPTKKMSKSDDNEANF 206

Query: 248 NKEMTSPYNFWQYW-RNIDDAD---VVSF--------AKRLTTL------PMSEIDRMAK 289
              +  P    +   R + D+D   VV F        +  LT +       + E+++   
Sbjct: 207 IGLLEDPKQIVKKIKRAVTDSDEPAVVRFDPENKPGVSNLLTLMSGVTGRSIPELEQHF- 265

Query: 290 LQGKEINEAKKIIATEITTMV 310
            +GK     K   A  +  ++
Sbjct: 266 -EGKMYGHLKTETAEAVVALL 285


>gi|117618550|ref|YP_857674.1| tryptophanyl-tRNA synthetase [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
 gi|117559957|gb|ABK36905.1| tryptophanyl-tRNA synthetase [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
          Length = 334

 Score = 45.6 bits (107), Expect = 0.017,   Method: Composition-based stats.
 Identities = 43/239 (17%), Positives = 83/239 (34%), Gaps = 47/239 (19%)

Query: 140 LLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGG 199
           +L        ++RM  F+   +R +   ++    F Y +L A D + L +     +   G
Sbjct: 94  ILNCYTQMGELSRMTQFKDKSARFENNVNVGL--FGYPVLMAADIL-LYQANQVPV---G 147

Query: 200 SDQWGNIICGIDLGERLKT--PKLFALTSPLLTTASG---------TKMGKTLSGAIWLN 248
           +DQ  ++    D+  R      ++F L  P + T             KM K+        
Sbjct: 148 NDQKQHLELTRDISTRFNNLYGEVFTLPEPFIPTEGARVMSLQDPTKKMSKSDDNEANFI 207

Query: 249 KEMTSPYNFWQYW-RNIDDAD---VVSF--------AKRLTTL------PMSEIDRMAKL 290
             +  P    +   R + D+D   VV F        +  LT +       + E+++    
Sbjct: 208 GLLEDPKQIVKKIKRAVTDSDEPAVVRFDPENKPGVSNLLTLMSGVTGRSIPELEQHF-- 265

Query: 291 QGKEINEAKKIIATEITTM-------VH--GREEAE-KAATAAMECFDMSIHSQHMPTI 339
           +GK     K   A  +  +        H   ++EA  +A  AA          + + ++
Sbjct: 266 EGKMYGHLKTETAEAVVALLEPIQARFHELRQDEAHLQAILAAGAQKARERAEKTLASV 324


>gi|313500462|gb|ADR61828.1| Tryptophanyl-tRNA synthetase [Pseudomonas putida BIRD-1]
          Length = 449

 Score = 45.6 bits (107), Expect = 0.017,   Method: Composition-based stats.
 Identities = 46/283 (16%), Positives = 84/283 (29%), Gaps = 48/283 (16%)

Query: 50  HAGHLTQLM--LLFWLQKTGHKPISLMGGGTSIIG-DPSFRDESRRMMRSQEIQENIEKI 106
           H G+    +   +   Q+ G      +    ++I  D   R +  R+   +     +   
Sbjct: 16  HLGNYAGAIRPAIRASQQPGVDSFYFLADYHALIKCDDPMRIQRSRL---EIAATWLAG- 71

Query: 107 KGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLS-FESVRSRLKR 165
                     G                  +   LL  + +   +NR  +   SV   ++ 
Sbjct: 72  ----------GLDPDKVTFYRQSDIPEIPELTWLLTCVAAKGLLNRAHAYKASVDKNVEN 121

Query: 166 EQ----SLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL----- 216
            +     ++   F+Y +L A D +    N   ++ +G  DQ  ++    D+G+R      
Sbjct: 122 GEDPDAGVTMGLFSYPVLMAADILMFNAN---KVPVG-RDQIQHVEMARDIGQRFNHLFG 177

Query: 217 KTPKLFAL-------TSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNID---- 265
           +    FAL       +   L    G KM K+    I L        +             
Sbjct: 178 QGKDFFALPEAVIEESVATLPGLDGRKMSKSYDNTIPLFTSAKDMKDAISRIVTDSRAPG 237

Query: 266 ---DADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKII 302
              D D              E     R   LQG    +AK+ +
Sbjct: 238 EAKDPDNAHLFTLYQAFSTPEQCAGFREELLQGLGWGDAKQRL 280


>gi|167765427|ref|ZP_02437540.1| hypothetical protein BACSTE_03817 [Bacteroides stercoris ATCC
           43183]
 gi|167697055|gb|EDS13634.1| hypothetical protein BACSTE_03817 [Bacteroides stercoris ATCC
           43183]
          Length = 364

 Score = 45.6 bits (107), Expect = 0.017,   Method: Composition-based stats.
 Identities = 43/244 (17%), Positives = 71/244 (29%), Gaps = 40/244 (16%)

Query: 44  LTASSLHAGHLTQLMLLFW---LQKTGH--KPISLMGGGTSIIGDPSFRDESRRMMRSQE 98
            T   LH GH      L     LQ +G   K    +    ++         +  M   ++
Sbjct: 13  PTGR-LHIGHYVG--SLRRRVELQNSGLYDKTFVFIADAQAL---------TDNMENPEK 60

Query: 99  IQENIEKIKGIFSSFIKY-----GTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRM 153
           +++N+          + Y        K+   + +    LC + +  +     S    N  
Sbjct: 61  VRQNV------IEVALDYLACGLDPTKSTIFIQSQIPELCELTFYYMDLVTVSRLQRNPT 114

Query: 154 LSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRL---QMGGSDQ------WG 204
           +  E      +    + F  F Y I QA D     +     +   Q    +Q        
Sbjct: 115 VKTEIQMRNFETSIPVGF--FTYPISQAADITA-FRATTVPVGEDQEPMIEQAREIVRRF 171

Query: 205 NIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNI 264
           N I G  L E        A    L  T    KM K+L   I+L+          +     
Sbjct: 172 NFIYGDTLVEPEILLPDNAACLRLPGTDGKAKMSKSLGNCIYLSDTADEIQKKVKSMYTD 231

Query: 265 DDAD 268
            D  
Sbjct: 232 PDHL 235


>gi|260061223|ref|YP_003194303.1| tryptophanyl-tRNA synthetase [Robiginitalea biformata HTCC2501]
 gi|88785355|gb|EAR16524.1| tryptophanyl-tRNA synthetase [Robiginitalea biformata HTCC2501]
          Length = 322

 Score = 45.6 bits (107), Expect = 0.017,   Method: Composition-based stats.
 Identities = 40/217 (18%), Positives = 65/217 (29%), Gaps = 35/217 (16%)

Query: 144 IGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQW 203
           +  FF   R+    S + +  R + ++   F Y +L A D +     YD  L   G DQ 
Sbjct: 95  LSCFFPYQRLTLAHSFKDKADRLEDVNAGLFTYPMLMAADILL----YDADLVPVGKDQL 150

Query: 204 GNIICGIDLGERLKTPKLFALTSP---------LLTTASGTKMGKTLSGAIWL-NKEMTS 253
            ++    D+  R           P          +    G KM K+    I +   +   
Sbjct: 151 QHLEMTRDVASRFHAQLGETFVMPEARLHENTMYIPGTDGQKMSKSRGNLIDIFQPDKAL 210

Query: 254 PYNFWQYWRNI--------DDAD-VVSFAKRL-TTLPMSEIDRMAKLQGKEINEAKKIIA 303
                    +          D+D V +  K L T     E+    +        AK+ + 
Sbjct: 211 RKQIMGIVTDSTPLEEPKDPDSDTVFALYKILATPEQTEEMRANYEGGNYGYGHAKQAL- 269

Query: 304 TEITTMVHGREEAEKAATAAMECFD-MSIHSQHMPTI 339
            E    V G          A E F+    H   +   
Sbjct: 270 YECIREVFGE---------ARERFEYYKQHPGEVEEA 297


>gi|116198065|ref|XP_001224844.1| hypothetical protein CHGG_07188 [Chaetomium globosum CBS 148.51]
 gi|88178467|gb|EAQ85935.1| hypothetical protein CHGG_07188 [Chaetomium globosum CBS 148.51]
          Length = 458

 Score = 45.6 bits (107), Expect = 0.017,   Method: Composition-based stats.
 Identities = 26/140 (18%), Positives = 48/140 (34%), Gaps = 14/140 (10%)

Query: 15  RGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG +    +    LD          Y G   ++ S+H GH        WLQ T   P+ +
Sbjct: 81  RGIVFSHRDFELILDRYERGEPFFLYTGRGPSSDSVHVGHTIPFEFTKWLQDTFDVPLII 140

Query: 74  MGGGTSIIGDPSF-RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL 132
           M     +  D  +   E R       I+E            I  G       + ++  ++
Sbjct: 141 M-----LTDDEKYLFSEKR------TIEEVQGYCNSNSKDIIAIGFDPAKTFIFSDFDYV 189

Query: 133 CSIKYIDLLREIGSFFSVNR 152
               Y +++R +    ++N+
Sbjct: 190 GGAFYRNIVR-LSKHITLNQ 208


>gi|297570989|ref|YP_003696763.1| tryptophanyl-tRNA synthetase [Arcanobacterium haemolyticum DSM
           20595]
 gi|296931336|gb|ADH92144.1| tryptophanyl-tRNA synthetase [Arcanobacterium haemolyticum DSM
           20595]
          Length = 368

 Score = 45.2 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 44/253 (17%), Positives = 70/253 (27%), Gaps = 58/253 (22%)

Query: 20  QISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQ-LMLLFWLQKTGHKPISLMGGG- 77
           Q+S+   L I           G   T   LH GH    L     LQK G     L+    
Sbjct: 24  QMSDKINLAIDEDPSKFRVLTGARPTG-HLHIGHYFGTLQNWVKLQKRGVDTWLLIADYQ 82

Query: 78  --TSIIGDPSFRDESRRMMR---------SQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
             T      S ++ +  ++           + +     +I  +    + + +  TDA + 
Sbjct: 83  VITDRDEADSIQERTMSLLTDYLAVGMDPEETVFFAHSQIPELNELVLPFLSVVTDAELR 142

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
            N                                +     + +S L   Y + QA D + 
Sbjct: 143 RN------------------------PTVKAEFEA--THGRPMSGLLLTYPVHQAADILF 176

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDL-----GERLKTPKL-------FALTSPL--LTTA 232
              N    L   G DQ  ++     +         K  K         AL S    +   
Sbjct: 177 CKAN----LVPVGKDQLPHLEQARVIADRFEKRYNKGKKAKRIFPRPHALLSDATHVLGL 232

Query: 233 SGTKMGKTLSGAI 245
            G KM K+    I
Sbjct: 233 DGEKMSKSRGNTI 245


>gi|282860930|ref|ZP_06269996.1| tryptophanyl-tRNA synthetase [Streptomyces sp. ACTE]
 gi|282564666|gb|EFB70202.1| tryptophanyl-tRNA synthetase [Streptomyces sp. ACTE]
          Length = 337

 Score = 45.2 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 52/299 (17%), Positives = 95/299 (31%), Gaps = 51/299 (17%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSII--GDP-SFRDESRRMMRSQ 97
           G   TA S H G+    +  +   +  H    ++    +I    DP   R  +R      
Sbjct: 11  GIQPTAGSFHLGNYLGAVRQWVALQESHDAFYMVVDLHAITVPQDPVELRSNTR------ 64

Query: 98  EIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLS-F 156
                   +             +    + ++      + +I  +  +  F   +RM    
Sbjct: 65  --------LAAAQLLAAGLDPERCTLFVQSHVPEHAQLGWI--MNCLTGFGEASRMTQFK 114

Query: 157 ESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL 216
           +    +     ++    F Y +LQ  D + L +  +  +   G DQ  +I    DL ER 
Sbjct: 115 DKSAKQGADRATVGL--FTYPVLQVADIL-LYQANEVPV---GEDQRQHIELTRDLAERF 168

Query: 217 KT--------PKLFAL--TSPLLTTAS-GTKMGKTLSGAIWLNKEMTSPYNFWQYWRN-I 264
                     P  + L  T+ +        KM K+ S    L   +  P    +  R+ +
Sbjct: 169 NGRFGETFTVPSPYILKETAKIYDLQDPAVKMSKSASTPKGLINLLDEPKATAKKVRSAV 228

Query: 265 DDAD------------VVSFAKRLTTLPMSEI-DRMAKLQGKEINEAKKIIATEITTMV 310
            D D            V +     +TL  + + D   K +GK     K  +A  +   V
Sbjct: 229 TDTDTVIRFDAEKKPGVSNLLSIYSTLTGTAVTDLEQKYEGKGYGALKTDLAEVMVEFV 287


>gi|260909832|ref|ZP_05916524.1| tryptophan-tRNA ligase [Prevotella sp. oral taxon 472 str. F0295]
 gi|260636063|gb|EEX54061.1| tryptophan-tRNA ligase [Prevotella sp. oral taxon 472 str. F0295]
          Length = 327

 Score = 45.2 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 50/299 (16%), Positives = 91/299 (30%), Gaps = 53/299 (17%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESR--RMMRSQE 98
           G   T + LH G+    +  F   +  ++ +  +    S+   P   D  R  R++ ++ 
Sbjct: 7   GIRPTGN-LHLGNYFGAVKSFVKMQDEYESLFFIADWHSLTTSPKPEDIQRSARVILAEY 65

Query: 99  IQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
           +   I+  K                L  N   +L  ++ +   ++       N       
Sbjct: 66  LACGIDPQKAKIYVQSDVKETLELYLFFNMNMYLGELERVTTFKDKARQQPDNV------ 119

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK- 217
                     L      Y  L A D ++  +     +   G DQ  N+        R   
Sbjct: 120 -------NAGL----LTYPTLMAADILQ-HRAQKVPV---GKDQEQNMEMARKCARRFNH 164

Query: 218 --------TPKLFALTSPLL--TTASGT-KMGKTLSGAIWLNKE--------MTSPYNFW 258
                    P+ F   +  +      GT KMGK+    I+L +E        M +  +  
Sbjct: 165 IYGVDFFPEPQNFYFNTQAVKVPGLDGTGKMGKSDGNCIYLYEEDAAIRKKVMKAVTDMG 224

Query: 259 QYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEA-------KKIIATEITTMV 310
               N    +V+      T L +           ++ N+        KK IA +I   V
Sbjct: 225 PQTPNSPKPEVIE--NLFTFLRICSEPETYNYFDEKWNDCSIRYGDLKKQIAEDIIKTV 281


>gi|269864865|ref|XP_002651723.1| tryptophanyl-tRNA synthetase [Enterocytozoon bieneusi H348]
 gi|220063997|gb|EED42333.1| tryptophanyl-tRNA synthetase [Enterocytozoon bieneusi H348]
          Length = 308

 Score = 45.2 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 39/219 (17%), Positives = 72/219 (32%), Gaps = 23/219 (10%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSF 86
           L+++ ++     Y G   ++SS+H GH    +L  +LQ   + P+ +             
Sbjct: 72  LEVIKTKKPFYIYTGRGPSSSSMHLGHTIPFLLCKYLQDVFNCPLVI-----------QI 120

Query: 87  RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGS 146
            D+ + + +   + + I+         I  G       + +N     S+   + LR I  
Sbjct: 121 TDDEKFIFKDMSLDDAIKYGIENIKDIIALGFNPKLTYIFSNYN-SSSLFEYNTLR-ISK 178

Query: 147 FFSVNRMLSFESVRSRLKREQSL---SFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQW 203
             ++N  L        L     +      E       ++ F  L K+    +     DQ 
Sbjct: 179 AINLNEALK--IFGFNLTSNIGMIQFPAKEIAPAFPTSFPF--LDKDAFVLIPS-AVDQD 233

Query: 204 GNIICGIDLGERLKTPKLFALTSPLLTTASG--TKMGKT 240
                  D    L   K   L   LL +  G   KM  +
Sbjct: 234 PFFRLARDKANSLNEKKPTTLYVDLLPSLKGIDKKMSAS 272


>gi|205372420|ref|ZP_03225233.1| tyrosyl-tRNA synthetase [Bacillus coahuilensis m4-4]
          Length = 65

 Score = 45.2 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 8/56 (14%), Positives = 18/56 (32%), Gaps = 2/56 (3%)

Query: 257 FWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINEAKKIIATEITTMV 310
            +    +I D  +  +   +T L + E      L+       +AK  +    +   
Sbjct: 1   MFGKTMSIPDTLLSKYVHLVTDLSLEEQAMDRDLENGVLHPRDAKIFLGRIKSKTF 56


>gi|293554034|ref|ZP_06674634.1| tryptophanyl-tRNA synthetase [Enterococcus faecium E1039]
 gi|291601816|gb|EFF32068.1| tryptophanyl-tRNA synthetase [Enterococcus faecium E1039]
          Length = 336

 Score = 45.2 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 55/346 (15%), Positives = 102/346 (29%), Gaps = 61/346 (17%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
            T   LH GH    +      +        +     +I D      +      +++  N+
Sbjct: 11  PTGK-LHLGHYVGSLKTRVAMQADEDNQLFV-----MIADMQ--ALTDNAKNPEKVSSNV 62

Query: 104 EKIKGIFSSFIKY-----GTGKTDALMLNNETWLCSIKYIDL-LREIGSFFSVNRMLSFE 157
                     + Y        K+   + +    L  +    L L  +G     N  +  E
Sbjct: 63  ------LQVALDYLAVGLDPAKSTLFIQSQIPELAELTMYYLNLVSVGR-VRRNPTVKTE 115

Query: 158 SVRSRLKREQSLSFLEFNYMILQAYDFVELAKN--------YDCRLQMGGSDQWGNIICG 209
             + +      + F  F Y + QA D      N             Q     Q  N   G
Sbjct: 116 IEQKKFGESVPIGF--FIYPVSQAADITAFKANLVPVGEDQKPMLEQTQEIVQSFNHTYG 173

Query: 210 IDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQ-YWRN---- 263
             L E         +    L    G  KM K+L   I+++     P +  Q    +    
Sbjct: 174 EVLVEPKGVFPPKGMGR--LPGIDGNGKMSKSLGNGIYISD----PADVLQKKVMSMYTD 227

Query: 264 -----------IDDADVVSFAKRL-TTLP-MSEIDRMAKLQGKEINEAKKIIAT----EI 306
                      ++   V ++     T    + E+    +  G    + K+ +      E 
Sbjct: 228 PNHIHVQDPGQVEGNMVFTYLDVFGTDKEAIEEMKAHYRRGGLGDVKIKRYLIDVLEAEF 287

Query: 307 TTMVHGREEAEKAATAAME-CFDMSIHSQHMPTISISKDEVSRGMG 351
             +   REE EK  +A ME     S  +  +   ++S+ + + G+ 
Sbjct: 288 APIRARREELEKDPSAVMEILRKGSEEAAKVAAQTLSEVKSAMGIN 333


>gi|187931235|ref|YP_001891219.1| tryptophanyl-tRNA synthetase [Francisella tularensis subsp.
           mediasiatica FSC147]
 gi|187712144|gb|ACD30441.1| tryptophanyl-tRNA synthetase [Francisella tularensis subsp.
           mediasiatica FSC147]
          Length = 334

 Score = 45.2 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 40/109 (36%), Gaps = 23/109 (21%)

Query: 166 EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL--------GERLK 217
           ++ ++   FNY +L A D +     +D  L   G DQ  +I    D+         + + 
Sbjct: 128 DKGITMGLFNYPVLMAADILI----FDADLVPVGKDQIQHIEIARDIANRFNHIYQKPVL 183

Query: 218 TPKLFALTS---PLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
                ALTS     +    G KM K+    I +       ++  +  R 
Sbjct: 184 KAPQ-ALTSEDSQTILGLDGRKMSKSYDNTIAI-------FSMEKKLRK 224


>gi|307243246|ref|ZP_07525417.1| ribosomal RNA large subunit methyltransferase J [Peptostreptococcus
           stomatis DSM 17678]
 gi|306493374|gb|EFM65356.1| ribosomal RNA large subunit methyltransferase J [Peptostreptococcus
           stomatis DSM 17678]
          Length = 280

 Score = 45.2 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 23/54 (42%), Gaps = 6/54 (11%)

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGK 408
           L+V  GF  S  +ARR + +  + ++N  +      +K         I +  GK
Sbjct: 8   LLVDMGFFPSREQARRTIMAGNVFVDNQRVDKPGTMVK-----DDSEILV-KGK 55


>gi|90076298|dbj|BAE87829.1| unnamed protein product [Macaca fascicularis]
          Length = 475

 Score = 45.2 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 39/248 (15%), Positives = 82/248 (33%), Gaps = 31/248 (12%)

Query: 15  RGFIHQISN-PRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +  + LD   ++     Y G   ++ ++H GHL   +   WLQ   + P+ +
Sbjct: 138 RGIFFSHRDMNQVLDAYENKKPFYLYTGRGPSSEAMHVGHLIPFIFTKWLQDVFNVPLVI 197

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                         D+ + + +   + +            I  G       + ++  ++ 
Sbjct: 198 -----------QMTDDEKYLWKDLTLDQAYGYAVENAKDIIACGFDINKTFIFSDLDYMG 246

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA--------YDFV 185
                   + +     + + ++F  V+       S S  + ++  +QA            
Sbjct: 247 --MSSGFYKNV---VKIQKHVTFNQVKGIFGFTDSDSIGKISFPAIQAAPSFSNSFPQIF 301

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTASGTKMGKTLS 242
           +   +  C +     DQ        D+  R+  PK   L +   P L  A  TKM  +  
Sbjct: 302 QDRTDIQCLIPC-AIDQDPYFRMTRDVAPRIGYPKPALLHSTFFPALQGAQ-TKMSASDP 359

Query: 243 G-AIWLNK 249
             +I+L  
Sbjct: 360 NSSIFLTD 367


>gi|189424941|ref|YP_001952118.1| tryptophanyl-tRNA synthetase [Geobacter lovleyi SZ]
 gi|189421200|gb|ACD95598.1| tryptophanyl-tRNA synthetase [Geobacter lovleyi SZ]
          Length = 328

 Score = 45.2 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 35/225 (15%), Positives = 77/225 (34%), Gaps = 40/225 (17%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGG----TSIIGDPSFRDESRRMMRS 96
           G   T   LH GH   ++  +   +        +       T        +  +R     
Sbjct: 9   GMRPTGR-LHIGHYHGVLENWIKIQEQFDCFFFVADWHSLTTEYAETSGIKGSAR----- 62

Query: 97  QEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSF 156
           + + + +            +G   +  ++         +++ +L   +G    V+ +   
Sbjct: 63  EMVLDWVA-----------FGLDPSKCVVFEQSQ---VVQHAELNLILGMITPVSWLERN 108

Query: 157 ESVRSRLKR--EQSLSFLEFN-YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLG 213
            + +  L    ++ LS   F  Y +L A D + L K+    +   G DQ  ++    ++ 
Sbjct: 109 PTYKEMLDNIEQRDLSTFGFLGYPVLMAAD-IILYKSTRVPV---GHDQLPHLEITREIA 164

Query: 214 ERLK---------TPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
            R            P+     +P L    G KM K+ + +I+L++
Sbjct: 165 RRFNHLYDCQVFPEPEALLTETPKLLGLDGRKMSKSYNNSIYLSE 209


>gi|327280318|ref|XP_003224899.1| PREDICTED: tryptophanyl-tRNA synthetase, cytoplasmic-like [Anolis
           carolinensis]
          Length = 473

 Score = 45.2 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 44/251 (17%), Positives = 87/251 (34%), Gaps = 33/251 (13%)

Query: 15  RGFIHQISN-PRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +  + LD   ++     Y G   ++ ++H GHL   +   WLQ   + P+ +
Sbjct: 137 RGIFFSHRDMNQILDTYENKKPFYLYTGRGPSSEAMHVGHLIPFIFTKWLQDVFNVPLVI 196

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                         D+ + + +   I++  +         I  G       + ++  +L 
Sbjct: 197 -----------QLTDDEKYLWKDLTIEKAYQYAIENIKDVIACGFDINKTFIFSDLHYLG 245

Query: 134 -SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY-----DFVEL 187
            S  +   + ++    + N+      V+       S    + ++  +QA       F  +
Sbjct: 246 LSPGFYKNIVKVQKHVTFNQ------VKGIFGFTDSDCIGKISFPAIQAAPSFSSSFPHI 299

Query: 188 AKNYD---CRLQMGGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTASGTKMGKTL 241
             N D   C +     DQ        D+  R+  PK   L ++  P L  A  TKM  + 
Sbjct: 300 FNNRDDIQCLIPC-AIDQDPYFRMTRDVAPRIGYPKPALLHSVFFPALQGAQ-TKMSASD 357

Query: 242 SG-AIWLNKEM 251
              +I+L    
Sbjct: 358 PNSSIFLTDTP 368


>gi|307294075|ref|ZP_07573919.1| tryptophanyl-tRNA synthetase [Sphingobium chlorophenolicum L-1]
 gi|306880226|gb|EFN11443.1| tryptophanyl-tRNA synthetase [Sphingobium chlorophenolicum L-1]
          Length = 345

 Score = 45.2 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 46/265 (17%), Positives = 88/265 (33%), Gaps = 41/265 (15%)

Query: 41  GYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGT-SIIGDPSFRDESRRMMRSQE 98
           G   T + LH G+    +     +Q      ++     T        F  +   +   + 
Sbjct: 6   GIQPTGN-LHLGNYLGAIRNWVRMQDEMDTVVANADSATNGRSQCFFFLADMHSITVHEG 64

Query: 99  IQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLS-FE 157
            ++ I  ++ + ++ +  G     +++ N        +   LL        +NRM    +
Sbjct: 65  REQRIRNVRDMAAALVAAGIDPDRSVLFNQARVPAHAELCWLLNGTARIGWLNRMTQFKD 124

Query: 158 SVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK 217
            V       +  S   F Y +LQA D +     +   + +G  DQ  ++    D+  +  
Sbjct: 125 KVGK---DREGASIGLFVYPVLQAADILVYNATH---VPVG-EDQKQHLELARDIATKFN 177

Query: 218 TP---KLFALTSPLLTT--------ASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNID 265
           T    +LF L  P++            GT KM K+             P +  +   N+ 
Sbjct: 178 TDFGVELFTLPDPIIPKESARIMSFRDGTAKMSKS------------DPSDMSR--INLT 223

Query: 266 DAD---VVSFAKRLTT-LPMSEIDR 286
           D D   +    K  T   P+ E   
Sbjct: 224 DDDDAIMQKVKKAKTDPEPLPETAE 248


>gi|293604131|ref|ZP_06686539.1| tryptophan--tRNA ligase [Achromobacter piechaudii ATCC 43553]
 gi|292817356|gb|EFF76429.1| tryptophan--tRNA ligase [Achromobacter piechaudii ATCC 43553]
          Length = 449

 Score = 45.2 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 23/103 (22%), Positives = 41/103 (39%), Gaps = 18/103 (17%)

Query: 157 ESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL 216
           ++V   +  +  ++   F+Y +L A D +    N   R+ +G  DQ  ++    D+ +R 
Sbjct: 117 QNVAKGVDPDDGITMGLFSYPVLMAADILMFNAN---RVPVG-RDQIQHLEMARDIAQRF 172

Query: 217 KTPKLFA---LTSP---------LLTTASGTKMGKTLSGAIWL 247
               L+     T P          L    G KM K+ +  I L
Sbjct: 173 N--HLYGRDYFTLPEVAIEEDVATLPGLDGRKMSKSYNNTIPL 213


>gi|224534949|ref|ZP_03675518.1| tryptophan--tRNA ligase [Borrelia spielmanii A14S]
 gi|224513889|gb|EEF84214.1| tryptophan--tRNA ligase [Borrelia spielmanii A14S]
          Length = 348

 Score = 45.2 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 31/218 (14%), Positives = 68/218 (31%), Gaps = 28/218 (12%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRD-ESRRMMRSQEIQEN 102
            T + LH GH    ++     +  ++   ++    ++   P  +   +      + + + 
Sbjct: 12  PTGA-LHLGHYVGSVVNRLKFQEEYETYFIIADLHTLTTKPDLKSINTIPFNVREMVLDY 70

Query: 103 IEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR 162
           +          I   +   + + L             ++  +     +  +         
Sbjct: 71  LACGINPNKVSIYLQSAIPELIELY--------LIFSMIVTVARLQRIPSIKDMSIAAG- 121

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK----- 217
             +E     L   Y +L + D +    N    L   G D   +I    +L  R       
Sbjct: 122 -LKEIPYGLL--GYPVLMSADILMAKAN----LVPVGRDNESHIEFARELARRFNYLYKN 174

Query: 218 -----TPKLFALTSPLLTTASGTKMGKTLSGAIWLNKE 250
                   +F  + PL+      KM K+L+ AI+LN +
Sbjct: 175 NFFPIPESVFTDSRPLVGICGKNKMSKSLNNAIFLNDD 212


>gi|313676846|ref|YP_004054842.1| RNA-binding s4 domain protein [Marivirga tractuosa DSM 4126]
 gi|312943544|gb|ADR22734.1| RNA-binding S4 domain protein [Marivirga tractuosa DSM 4126]
          Length = 286

 Score = 45.2 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 15/60 (25%), Positives = 30/60 (50%), Gaps = 1/60 (1%)

Query: 336 MPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           + +  + + E+  G+ L   I  AG   S  EA +H+    +K+NN +++    ++K  D
Sbjct: 40  LKSAEVKEKELKEGIRLNKFISNAGIC-SRREADKHIADGKVKVNNKVVTELGFKVKPMD 98


>gi|311104856|ref|YP_003977709.1| tryptophanyl-tRNA synthetase [Achromobacter xylosoxidans A8]
 gi|310759545|gb|ADP14994.1| tryptophanyl-tRNA synthetase [Achromobacter xylosoxidans A8]
          Length = 450

 Score = 45.2 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 23/97 (23%), Positives = 39/97 (40%), Gaps = 18/97 (18%)

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLF 222
           L+ +  ++   F+Y +L A D V    N   ++ +G  DQ  ++    D+ +R     L+
Sbjct: 123 LEPDDGVTMGLFSYPVLMAADIVMFNAN---KVPVG-RDQIQHLEMARDIAQRFN--HLY 176

Query: 223 A---LTSP---------LLTTASGTKMGKTLSGAIWL 247
                T P          L    G KM K+ +  I L
Sbjct: 177 GRDYFTLPEVVIEEDVATLPGLDGRKMSKSYNNTIPL 213


>gi|226226307|ref|YP_002760413.1| tryptophanyl-tRNA synthetase [Gemmatimonas aurantiaca T-27]
 gi|226089498|dbj|BAH37943.1| tryptophanyl-tRNA synthetase [Gemmatimonas aurantiaca T-27]
          Length = 337

 Score = 45.2 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 41/236 (17%), Positives = 75/236 (31%), Gaps = 41/236 (17%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL--MGGGTSIIG--DPSFRDESRRMMRS 96
           G   +   LH G+    +   W++     P ++  +    +I G  D +     R  M  
Sbjct: 7   GIQPSGE-LHIGNYLGAVK-NWVRLQDTHPGAIYCVVDYHAITGTYDTAVLRARRWGMAK 64

Query: 97  QEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSF 156
             +   ++  K     F++              +WL     +  L ++            
Sbjct: 65  SLLAAGVDPSKAAL--FMQSDVPAHTE-----LSWL--FTTLTPLGDLERQTQ------- 108

Query: 157 ESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL 216
              + +  + +S+      Y +LQA D + L +     +   G DQ  ++    D   + 
Sbjct: 109 --FKDKSSKMESIPAGLLMYPVLQAADIL-LYRADSVPV---GEDQVQHLELARDTARKW 162

Query: 217 KTP---KLFALTSPLLT------TASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWR 262
                   F    PLLT         G  KM K+L   I L++        W   R
Sbjct: 163 NAKFDQPYFPEPKPLLTPTRRIMGLDGQAKMSKSLGNTIALHETD---EEIWAKIR 215


>gi|67526841|ref|XP_661482.1| hypothetical protein AN3878.2 [Aspergillus nidulans FGSC A4]
 gi|40739953|gb|EAA59143.1| hypothetical protein AN3878.2 [Aspergillus nidulans FGSC A4]
          Length = 1490

 Score = 45.2 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 16/61 (26%), Positives = 21/61 (34%), Gaps = 1/61 (1%)

Query: 15   RGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
            RG      +  + L           Y G   ++ SLH GH   L    WLQ     P+  
Sbjct: 1137 RGLFFSHRDFEKILTKKEKGEPFFLYTGRGPSSGSLHLGHTIPLTFTKWLQDVFDVPLVF 1196

Query: 74   M 74
            M
Sbjct: 1197 M 1197


>gi|332982020|ref|YP_004463461.1| tryptophanyl-tRNA synthetase [Mahella australiensis 50-1 BON]
 gi|332699698|gb|AEE96639.1| tryptophanyl-tRNA synthetase [Mahella australiensis 50-1 BON]
          Length = 327

 Score = 45.2 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 25/137 (18%), Positives = 46/137 (33%), Gaps = 30/137 (21%)

Query: 199 GSDQWGNIICGIDLGERLKTPKLFALTSP----------LLTTASGTKMGKTLSGAIWLN 248
           G DQ  ++    ++  R     L+  T P          +L    G KM K+    I L+
Sbjct: 151 GEDQLPHLELAREIVRRFNF--LYGETFPEPQALLNDVKVLPGLDGRKMSKSYGNTILLS 208

Query: 249 KEMTSPYNFWQYW-RNIDDA--------------DVVSFAKRLTTLPMSEIDRMAKLQGK 293
           ++   P +  +     I D                V +F K  +   + E +R  K    
Sbjct: 209 ED---PESARKKISMMITDPARIKKDDPGHPDICSVFAFHKVFSPDIVQERERECKAGQI 265

Query: 294 EINEAKKIIATEITTMV 310
              + K+ +A  +   +
Sbjct: 266 GCVQCKRQLADNVVAFL 282


>gi|269216032|ref|ZP_06159886.1| tryptophan--tRNA ligase [Slackia exigua ATCC 700122]
 gi|269130291|gb|EEZ61369.1| tryptophan--tRNA ligase [Slackia exigua ATCC 700122]
          Length = 349

 Score = 45.2 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 52/351 (14%), Positives = 106/351 (30%), Gaps = 48/351 (13%)

Query: 22  SNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQ-LMLLFWLQKTGHKPISLMGGGTSI 80
           SN    DI  + G      G   T   LH GH    +     +Q  G   + L+      
Sbjct: 14  SNEIRADIKVNPGNYRMLTGDRPTGR-LHLGHYFGSIQNRVAMQDAGVNCMILIADYQV- 71

Query: 81  IGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG-TGKTDALMLNNETWLCSIKYID 139
                       +      +   + +  +   ++  G       +  ++     +   + 
Sbjct: 72  ------------ITDRDTTEHIQDNVYNMVMDYVAAGIDPARTPIFTHSAVPAENQLMLP 119

Query: 140 LLREIGSFFSVNRMLSFES-VRSRLK-REQSLSFLEFNYMILQAYDFVELAKNYDCRLQM 197
            L  +         L     V+S ++     L+ L   Y + QA D +    N    +  
Sbjct: 120 FLSLVSEAE-----LQRNPTVKSEMEASGHELTGLLLTYPVHQACDILFCKAN----IVP 170

Query: 198 GGSDQWGNIICGIDLGERLKT-------PKLFALTSPL-LTTASGTKMGKTLSGAIWLNK 249
            G DQ  +I     +  R               L+  + +    G KM K+   +I L  
Sbjct: 171 VGKDQLPHIEVTRQIARRFNKRYGKVFPEPEGILSDAIEIPGLDGRKMSKSYGNSIMLGA 230

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAK--------RLTTLPM----SEIDRMAKLQGKEINE 297
                    +     D   +++F K         LTT  +    +E D   ++      +
Sbjct: 231 TAEETAKLVKK-SKTDSERMITFDKEGRPGVSALLTTAALCTGRTEADIAEEIGEGGSGQ 289

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSR 348
            K+ +   +   +    E  +A    ++     IH  +    +I++  ++ 
Sbjct: 290 LKRYVTESVNEFLAPHRERRRAFEGDLDYIKDVIHEGNKAACAIAEQTLAE 340


>gi|269128399|ref|YP_003301769.1| tryptophanyl-tRNA synthetase [Thermomonospora curvata DSM 43183]
 gi|268313357|gb|ACY99731.1| tryptophanyl-tRNA synthetase [Thermomonospora curvata DSM 43183]
          Length = 345

 Score = 45.2 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 54/307 (17%), Positives = 98/307 (31%), Gaps = 60/307 (19%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQ--KTGHKPISLMGGGTSII--GDPSFRDESRRMMRS 96
           G   TA S H G+      L      +  H+    +    +I    DP+      R+  +
Sbjct: 12  GIQPTADSFHLGNYLG--ALRQWVALQDTHEAFYCVVDLHAITVEHDPAALRRRSRVAAA 69

Query: 97  QEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSF 156
           Q +   +                   A+ + +       +   +L  +  F   +RM  F
Sbjct: 70  QLLAMGV--------------DPDRAAVFVQSHV-PEHTELAWVLGCLTGFGEASRMTQF 114

Query: 157 ESVRSRLKREQSLSFLEFNYMILQAYDFVELAK---NYDCRLQM-GGSDQWGNIICGIDL 212
           +   ++     +   L F Y IL A D + L          LQ+  G DQ  ++    DL
Sbjct: 115 KDKSAKYGASATTVGL-FTYPILMAADIL-LYTPEPGEGQVLQVPVGEDQRQHLELTRDL 172

Query: 213 GERLKTPKLFALTSPLLTT---ASG----------TKMGKTLSGAIWLNKEMTSPYNFWQ 259
            +R      F  T  L T                  KM K+ S    + + +  P    +
Sbjct: 173 AQRFNHR--FGETFVLPTAYIPEDAAKITDLQEPTVKMSKSASSPQGIVEVLEQPSTMRK 230

Query: 260 YWRN-IDD---------------ADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIA 303
                + D                +++     L  +P++E++R  + QG    + KK +A
Sbjct: 231 KIMRAVTDTGSEIRYDEENKPGITNLLRIYAALEGVPVAELERRYEGQG--YGQFKKDLA 288

Query: 304 TEITTMV 310
             +    
Sbjct: 289 QLLLDTF 295


>gi|197303292|ref|ZP_03168332.1| hypothetical protein RUMLAC_02014 [Ruminococcus lactaris ATCC
           29176]
 gi|197297576|gb|EDY32136.1| hypothetical protein RUMLAC_02014 [Ruminococcus lactaris ATCC
           29176]
          Length = 361

 Score = 45.2 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 47/268 (17%), Positives = 73/268 (27%), Gaps = 48/268 (17%)

Query: 44  LTASSLHAGHLTQLMLLFW---LQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
            T   LH GH      L     LQ TG    I +M      + D +   E  R    +  
Sbjct: 11  PTGK-LHVGHYVG--SLRRRVELQNTGDFDDIFIMIADAQALTDNADNPEKIRQNIIEVA 67

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
            + +                K+   + +    LC + +  +     S    N  +  E  
Sbjct: 68  LDYLACG---------LDPAKSTLFIQSQIPELCELSFYYMNLVTVSRLQRNPTVKSEIQ 118

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQ------------WGNII 207
               +    + F  F Y I QA D           + +G  DQ              N +
Sbjct: 119 MRNFEASIPVGF--FTYPISQAADITAFKA---TTVPVG-EDQMPMLEQTKEIVHKFNSV 172

Query: 208 CGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDA 267
            G  L +             L       KM K+L   I+L++E               D 
Sbjct: 173 YGETLVDPKILLPENEACLRLPGIDGKAKMSKSLGNCIYLSEE--------------PDE 218

Query: 268 DVVSFAKRLTTLPMSEIDRMAKLQGKEI 295
                    T      I+    L+G  +
Sbjct: 219 IKKKVFSMFTDPNHIRIEDPGSLEGNTV 246


>gi|114776456|ref|ZP_01451501.1| tryptophanyl-tRNA synthetase [Mariprofundus ferrooxydans PV-1]
 gi|114553286|gb|EAU55684.1| tryptophanyl-tRNA synthetase [Mariprofundus ferrooxydans PV-1]
          Length = 343

 Score = 45.2 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 42/227 (18%), Positives = 76/227 (33%), Gaps = 39/227 (17%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQ-KTGHKPISLMGGG---TSIIGDPSFRDESRRMMRS 96
           G   T   LH GH   ++   WLQ +  H+           T+   +PS   ++   +  
Sbjct: 17  GMRPTGK-LHLGHYKGVLE-NWLQLQEQHQCYFFAADWHALTTEYANPSIVKDT---IWD 71

Query: 97  QEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSF 156
             I      I    +           A +    +++  + +++                 
Sbjct: 72  MLIDWLAVGIDPEKAVVFIQSEVPEHAELHLLFSFMTPLSWLE-----------RVPTYK 120

Query: 157 ESVRSRLKREQSLSFLEFN-YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER 215
           + +     RE+ L    F  Y +LQ+ D + + +     +   G DQ  +I    ++  R
Sbjct: 121 DQIEQ--LREKDLGTYGFLGYPLLQSADIL-MYRADGVPV---GEDQIPHIELTREVARR 174

Query: 216 L------KTPKLF----ALTSPL--LTTASGTKMGKTLSGAIWLNKE 250
                    P LF    +L  P   L    G KM K+ +  I L +E
Sbjct: 175 FNHLYRQGIPPLFPEPESLLMPAAKLPGLDGRKMSKSYNNTIELGEE 221


>gi|288869787|ref|ZP_05976326.2| tryptophan--tRNA ligase [Methanobrevibacter smithii DSM 2374]
 gi|288860247|gb|EFC92545.1| tryptophan--tRNA ligase [Methanobrevibacter smithii DSM 2374]
          Length = 365

 Score = 45.2 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 45/264 (17%), Positives = 90/264 (34%), Gaps = 41/264 (15%)

Query: 6   SDFLSI------LSERGFIHQISNPRELDILCSQGV-VTAYIGYDLTASSLHAGHLTQLM 58
           SD +        L +RG I    +  +++ L ++        G   +   +H GH   + 
Sbjct: 28  SDLIDDVENPHRLMKRGVIFGHRDFDKVNNLINKKEDFAVVGGMMPSGQ-MHIGHKMVVD 86

Query: 59  LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT 118
            L W Q  G     L+    S        +++R +          E +    +  +    
Sbjct: 87  QLKWYQDKGAMLSILIADLESYAARDMSFEKARDI-------AVNEYLTNYIALGLDLEE 139

Query: 119 GKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMI 178
              +  +             D LR++   F  ++  +F  +++     QS +       +
Sbjct: 140 DNVNVYL---------QSKNDTLRDLA--FKASKKTNFNELKAIYGFTQSTNIAHIQAPL 188

Query: 179 LQAYDF-VELAKNYD----CRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSP------ 227
           +Q  D  +   + +       + +G  DQ  +I    D+  +L     +    P      
Sbjct: 189 VQVADILLPQLEEFGGPKRVVVPVG-VDQDPHIRLTRDIAHKLNDE--YGFIPPSSTYHR 245

Query: 228 LLTTASGTKMGKTLSG-AIWLNKE 250
            LT  SG KM  +    AI+LN++
Sbjct: 246 FLTGLSGDKMSSSKPSTAIYLNED 269


>gi|225075317|ref|ZP_03718516.1| hypothetical protein NEIFLAOT_00320 [Neisseria flavescens
           NRL30031/H210]
 gi|224953492|gb|EEG34701.1| hypothetical protein NEIFLAOT_00320 [Neisseria flavescens
           NRL30031/H210]
          Length = 336

 Score = 45.2 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 35/211 (16%), Positives = 61/211 (28%), Gaps = 46/211 (21%)

Query: 166 EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALT 225
           +  +    ++Y IL   D + +   ++  +   G DQ  ++    D+  R         T
Sbjct: 128 DHGVEMGLYSYPILMTADIL-MFNAHEVPV---GRDQIQHVEMARDIAGRFNHRFKELFT 183

Query: 226 SP---------LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWR---------NIDDA 267
            P         LL    G KM K+    I L +                         D 
Sbjct: 184 LPEVKIDENVELLVGLDGRKMSKSYGNTIPLWENDKKTQKSVNKIITNMKEPGEPKQPDE 243

Query: 268 D-VVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITT------------------ 308
             +    K  +T   +        +G    EAKK++  +I                    
Sbjct: 244 SPLFEIYKAFSTPSETAEFTQMLAEGLAWGEAKKLLGAKINAELAEPRERYNELTAKPSQ 303

Query: 309 ---MVHGREEAEKAATAAMECFDMSIHSQHM 336
              ++H    A+KA   A E  D    +  +
Sbjct: 304 IEDILH--AGAQKARKEARELLDKVRDAVGI 332


>gi|118443301|ref|YP_877438.1| tryptophanyl-tRNA synthetase [Clostridium novyi NT]
 gi|118133757|gb|ABK60801.1| tryptophanyl-tRNA synthetase [Clostridium novyi NT]
          Length = 334

 Score = 45.2 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 51/303 (16%), Positives = 93/303 (30%), Gaps = 50/303 (16%)

Query: 32  SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG-HKPISLMGGGTSIIGDPSFRDES 90
           ++     + G   +   L  G+    +   W++    +     +    +I      +D  
Sbjct: 4   AEQKKVIFSGIQPSGD-LTLGNYLGALK-NWVKLQDEYDCYYCIVDMHAITVRQEPKDLR 61

Query: 91  RRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSV 150
           RR +    I           + FI+              +W+  +     + E+      
Sbjct: 62  RRTLELLSIYIAAGIDPEKNTLFIQSHVPAHAEC-----SWI--LNCNSYMGEL------ 108

Query: 151 NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGI 210
           +RM  ++    +      +    F Y +L A D +     Y   L   G DQ  ++    
Sbjct: 109 SRMTQYKDKSQKYGNHIGVGL--FTYPVLMASDILL----YQADLVPVGKDQKQHLELTR 162

Query: 211 DLGERLKTP--KLFALTSPLLTTASGT---------KMGKTLSGAIWLNKEMTSPYNFWQ 259
           DL ER        F +  P +  A            KM K+          M  P    +
Sbjct: 163 DLAERFNNAYSPTFKVPEPYIPEAGAKIMDLQEPTKKMSKSSDNPNSFILIMDPPEVIRK 222

Query: 260 YW-RNIDDAD-VVSF-------AKRLTTLP------MSEIDRMAKLQGKEINEAKKIIAT 304
              R + D+  VV +          +T L         EI++  + QG    + KK +A 
Sbjct: 223 KISRAVTDSLGVVKYSDDQPGVKNLITILSAITGKTPEEIEKDYEGQGYA--QFKKDVAE 280

Query: 305 EIT 307
            I 
Sbjct: 281 AIV 283


>gi|260907097|ref|ZP_05915419.1| tryptophanyl-tRNA synthetase [Brevibacterium linens BL2]
          Length = 332

 Score = 45.2 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 48/291 (16%), Positives = 96/291 (32%), Gaps = 49/291 (16%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   T+ SLH G+    +  F   +  H     +    +I  +    D   R +R+    
Sbjct: 12  GIQATSDSLHLGNYIGALQQFVAHQESHDAFYFIANMHAITVEQDPTDLRERTLRTA--- 68

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
                     + FI  G     + +          +   +L    S    +RM      +
Sbjct: 69  ----------AQFIAAGIDPEKSTIFVQSQVPAHPQLSWVLECTTSMGEASRMTQ---FK 115

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK--- 217
            +  ++  +S     Y  L A D +     Y+ ++   G DQ  ++    +L ER     
Sbjct: 116 DKSAKQDHVSLGLLTYPALMAADILL----YNPQMVPVGEDQRQHLELTRNLAERFNYRF 171

Query: 218 -----TPKLFAL--TSPLLTTAS-GTKMGKTLSGAIWLNKEMTSPYNFWQYWRN--IDDA 267
                 P+   L  T+ +    +   KM K+L   +     +    +  +  ++   DD 
Sbjct: 172 GETFVVPEAQILKATAKIYDLQNPSAKMSKSLPSPLGRIDLLDEAKSLTKKIKSAVTDDG 231

Query: 268 DVVSF--------------AKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
             +++                 LT+  + +I  +A+ +GK     K  +A 
Sbjct: 232 KEIAYDPEAKPGVSNLLTIYSSLTSRSVDDI--VAEYEGKMYGHLKVDLAE 280


>gi|284165504|ref|YP_003403783.1| ribosomal protein S4E, central domain protein [Haloterrigena
           turkmenica DSM 5511]
 gi|284015159|gb|ADB61110.1| Ribosomal protein S4E, central domain protein [Haloterrigena
           turkmenica DSM 5511]
          Length = 233

 Score = 45.2 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 1/53 (1%)

Query: 347 SRGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
             G+ L+ L+    G+  S  EAR  L  +AI +N   I++EK  I + D  +
Sbjct: 34  EEGVPLVVLLRDVLGYVDSKKEARYALSEDAILVNGEPINDEKRPIGIFDIVA 86


>gi|294941734|ref|XP_002783213.1| IFP53, putative [Perkinsus marinus ATCC 50983]
 gi|239895628|gb|EER15009.1| IFP53, putative [Perkinsus marinus ATCC 50983]
          Length = 1378

 Score = 45.2 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 53/334 (15%), Positives = 97/334 (29%), Gaps = 49/334 (14%)

Query: 15  RGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +   L     +G     Y G   ++ SLH GHL       WLQ T   P+ +
Sbjct: 266 RGLFFSHRDLGILLDKYERGIPFYLYTGRGPSSESLHLGHLVPFQFTKWLQDTFDVPLVI 325

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                 +  D  F  +    +  +E               I  G       + ++  ++ 
Sbjct: 326 -----QLTDDEKFFFKD--YLSLEEAHRLA---YENAKDIIACGFDMDKTFIFSDLDYMG 375

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA----- 188
           ++     + +I    + N+  +  +         S+    F   I  +  F         
Sbjct: 376 TMYPN--VCKIQKLVTYNQ--ARGAFG--FTGSDSVGKSSFC-AIQASPSFSTTFPSIFG 428

Query: 189 --KNYDCRLQMGGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTASGTKMGKTLSG 243
             K+  C +     DQ        D+  R+   K   + +   P L     TKM  ++  
Sbjct: 429 DRKDIMCLIPQ-AIDQDPYFRVTRDVAPRMGMLKPALIHSKFFPALQGHK-TKMSGSVGN 486

Query: 244 -AIWLN------KEMTSPYNFWQ----------YWRNIDDADVVSFAKRL--TTLPMSEI 284
             I +       K     Y F            Y  N++      + + +        +I
Sbjct: 487 TTIMVTDSKKEIKNKIMKYCFSGGQDSAEEQRKYGANLEVDVAYEYLRYVMEDDEKFKQI 546

Query: 285 DRMAKLQGKEINEAKKIIATEITTMVHGREEAEK 318
                       E K I+  E+  +    +EA  
Sbjct: 547 GEDYSSGKLLTGEVKNILVEELVNLTKAHQEARA 580


>gi|237731360|ref|ZP_04561841.1| tryptophanyl-tRNA synthetase II [Citrobacter sp. 30_2]
 gi|226906899|gb|EEH92817.1| tryptophanyl-tRNA synthetase II [Citrobacter sp. 30_2]
          Length = 334

 Score = 45.2 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 33/216 (15%), Positives = 63/216 (29%), Gaps = 27/216 (12%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
            T   LH GH    +      +  ++   L+     +  + S   + R  +         
Sbjct: 13  PTGP-LHLGHYVGSLRQRATLQHDYQQFILVADLQGLTDNGSTPQKIRNNIPEVLADYLA 71

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL 163
             I              T   + +    L  +  + +     +    N  +  E  +   
Sbjct: 72  AGI----------DPSLTTICLQSALPALAELTALYMNIVTVARVERNPTVKNEIAQKGF 121

Query: 164 KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT---PK 220
            R   + FL   Y I QA D       +   +   G DQ   I    ++  ++ +     
Sbjct: 122 ARSLPVGFL--VYPISQAADITA----FKAEVVPVGDDQLPMIEQTNEIVHKMNSLLPAP 175

Query: 221 LFALTSPL------LTTASGT-KMGKTLSGAIWLNK 249
           + +    L      L    G  KM K+L   + L+ 
Sbjct: 176 VLSHCKALLSETSRLPGIDGNAKMSKSLGNTLLLSA 211


>gi|255011750|ref|ZP_05283876.1| tryptophanyl-tRNA synthetase II [Bacteroides fragilis 3_1_12]
 gi|313149587|ref|ZP_07811780.1| tryptophanyl-tRNA synthetase II [Bacteroides fragilis 3_1_12]
 gi|313138354|gb|EFR55714.1| tryptophanyl-tRNA synthetase II [Bacteroides fragilis 3_1_12]
          Length = 363

 Score = 45.2 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 40/245 (16%), Positives = 71/245 (28%), Gaps = 42/245 (17%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGH--KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +     LQ +G   K    +    ++         +  +   ++++
Sbjct: 13  PTGK-LHIGHYVGSLKRRVELQNSGLFDKTFIFIADAQAL---------TDNIDNPEKVR 62

Query: 101 ENIEKIKGIFSSFIKY-----GTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLS 155
           +N+          + Y        K+   + +    LC + +  +     S    N  + 
Sbjct: 63  QNV------IEVALDYLACGLDPEKSTIFIQSQIPELCELTFYYMDLVTVSRLQRNPTVK 116

Query: 156 FESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER 215
            E      +    + F  F Y I QA D           + +G  DQ   I    ++  R
Sbjct: 117 TEIQMRNFETSIPVGF--FTYPISQAADITAFRA---TTVPVG-EDQEPMIEQAREIVRR 170

Query: 216 LK-------TPKLFALTSPL----LTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
                          L        L    G  KM K+L   I+L++E             
Sbjct: 171 FNYIYGETLVEPEILLPDNAACLRLPGTDGKAKMSKSLGNCIYLSEEADEVQKKVMSMFT 230

Query: 264 IDDAD 268
             D  
Sbjct: 231 DPDHL 235


>gi|71657803|ref|XP_817411.1| tyrosyl-tRNA synthetase [Trypanosoma cruzi strain CL Brener]
 gi|70882601|gb|EAN95560.1| tyrosyl-tRNA synthetase, putative [Trypanosoma cruzi]
          Length = 690

 Score = 45.2 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 36/228 (15%), Positives = 83/228 (36%), Gaps = 22/228 (9%)

Query: 19  HQISNPRELDILCSQGV-VTAYIGYDLTASSLHA--GHLTQLMLLFWLQKTGHKPISLMG 75
            +     EL  L ++   +  Y G++ +   +H   G    + +     ++G + +  + 
Sbjct: 23  EECIQEEELLNLITKKPNIRCYDGFEPSGR-MHIAQGVFKAVNVNK-CTQSGCEFVFWVA 80

Query: 76  GGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSI 135
              +++ D    +  +  +  Q + E  +         I +     +     N  W   +
Sbjct: 81  DWFALMNDKMCGELEKIRIVGQYLIEVWKAAGMNMEKVI-FLWSSDEITRNANSYWKTVL 139

Query: 136 KYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRL 195
                  +IG   ++ R+   +      K+E +L+  +  Y ++Q  D   L  +  C+L
Sbjct: 140 -------DIGRRNTIARI--KKCCTIMGKQEGTLTAAQILYPLMQCADIFFLKADI-CQL 189

Query: 196 QMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLLTT-ASGT-KMGKT 240
              G DQ    +   +  + +    K   L+  +L+    G  KM K+
Sbjct: 190 ---GLDQRKVNMLAREYCDLIGRKLKPVILSHHMLSGLKEGQPKMSKS 234


>gi|222444552|ref|ZP_03607067.1| hypothetical protein METSMIALI_00164 [Methanobrevibacter smithii
           DSM 2375]
 gi|222434117|gb|EEE41282.1| hypothetical protein METSMIALI_00164 [Methanobrevibacter smithii
           DSM 2375]
          Length = 365

 Score = 45.2 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 45/264 (17%), Positives = 90/264 (34%), Gaps = 41/264 (15%)

Query: 6   SDFLSI------LSERGFIHQISNPRELDILCSQGV-VTAYIGYDLTASSLHAGHLTQLM 58
           SD +        L +RG I    +  +++ L ++        G   +   +H GH   + 
Sbjct: 28  SDLIDDVENPHRLMKRGVIFGHRDFDKVNNLINKKEDFAVVGGMMPSGQ-MHIGHKMVVD 86

Query: 59  LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT 118
            L W Q  G     L+    S        +++R +          E +    +  +    
Sbjct: 87  QLKWYQDKGAMLSILIADLESYAARDMSFEKARDI-------AVNEYLTNYIALGLDLEE 139

Query: 119 GKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMI 178
              +  +             D LR++   F  ++  +F  +++     QS +       +
Sbjct: 140 DNVNVYL---------QSKNDTLRDLA--FKASKKTNFNELKAIYGFTQSTNIAHIQAPL 188

Query: 179 LQAYDF-VELAKNYD----CRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSP------ 227
           +Q  D  +   + +       + +G  DQ  +I    D+  +L     +    P      
Sbjct: 189 VQVADILLPQLEEFGGPKRVVVPVG-VDQDPHIRLTRDIAHKLNDE--YGFIPPSSTYHR 245

Query: 228 LLTTASGTKMGKTLSG-AIWLNKE 250
            LT  SG KM  +    AI+LN++
Sbjct: 246 FLTGLSGDKMSSSKPSTAIYLNED 269


>gi|146319838|ref|YP_001199550.1| tryptophanyl-tRNA synthetase II [Streptococcus suis 05ZYH33]
 gi|146322029|ref|YP_001201740.1| tryptophanyl-tRNA synthetase II [Streptococcus suis 98HAH33]
 gi|145690644|gb|ABP91150.1| tryptophanyl-tRNA synthetase [Streptococcus suis 05ZYH33]
 gi|145692835|gb|ABP93340.1| tryptophanyl-tRNA synthetase [Streptococcus suis 98HAH33]
 gi|292559434|gb|ADE32435.1| Tryptophanyl-tRNA synthetase [Streptococcus suis GZ1]
          Length = 363

 Score = 45.2 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 47/310 (15%), Positives = 78/310 (25%), Gaps = 63/310 (20%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSIIGDPSFRDE--SRRMMRSQEIQ 100
            T   LH GH    +     LQ  G   + +       + D     +         + + 
Sbjct: 34  PTGK-LHIGHYVGSLKNRVLLQDAGQHELFVF------LADQQALTDHAKEPQKIVESVG 86

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
                              KT   + +    L  +    +     +    N  +  E  +
Sbjct: 87  NVALDYLAAG-----LDPAKTTIFIQSQIPELAELTMYYMNLVSVARLERNPTVKTEIAQ 141

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
                     FL   Y + QA D      N+   + +G +DQ   I    ++        
Sbjct: 142 KGFGEGIPAGFL--VYPVSQAADITAFKANF---VPVG-NDQKPMIEQTREIVRSFNHAY 195

Query: 221 LFALTSPL---------------LTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNI 264
               T  L               L    G  KM K+L   I+L  +M             
Sbjct: 196 Q---TDILVEPEGIYPENEAAGRLPGLDGNAKMSKSLGNGIYLADDM------------- 239

Query: 265 DDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAM 324
            D          T      ++   K++G  +              V GREE +    A  
Sbjct: 240 -DTLKKKVMSMYTDPNHIRVEDPGKIEGNMV---------FHYLDVFGREEDKAEIEAMK 289

Query: 325 ECFDMSIHSQ 334
           E +       
Sbjct: 290 EHYQRGGLGD 299


>gi|109084884|ref|XP_001105228.1| PREDICTED: tryptophanyl-tRNA synthetase, cytoplasmic isoform 2
           [Macaca mulatta]
          Length = 450

 Score = 45.2 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 39/248 (15%), Positives = 82/248 (33%), Gaps = 31/248 (12%)

Query: 15  RGFIHQISN-PRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +  + LD   ++     Y G   ++ ++H GHL   +   WLQ   + P+ +
Sbjct: 113 RGIFFSHRDMNQVLDAYENKKPFYLYTGRGPSSEAMHVGHLIPFIFTKWLQDVFNVPLVI 172

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                         D+ + + +   + +            I  G       + ++  ++ 
Sbjct: 173 -----------QMTDDEKYLWKDLTLDQAYGYAVENAKDIIACGFDINKTFIFSDLDYMG 221

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA--------YDFV 185
                   + +     + + ++F  V+       S S  + ++  +QA            
Sbjct: 222 --MSSGFYKNV---VKIQKHVTFNQVKGIFGFTDSDSIGKISFPAIQAAPSFSNSFPQIF 276

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTASGTKMGKTLS 242
           +   +  C +     DQ        D+  R+  PK   L +   P L  A  TKM  +  
Sbjct: 277 QDRTDIQCLIPC-AIDQDPYFRMTRDVAPRIGYPKPALLHSTFFPALQGAQ-TKMSASDP 334

Query: 243 G-AIWLNK 249
             +I+L  
Sbjct: 335 NSSIFLTD 342


>gi|317479875|ref|ZP_07938992.1| tRNA synthetase class I [Bacteroides sp. 4_1_36]
 gi|316903949|gb|EFV25786.1| tRNA synthetase class I [Bacteroides sp. 4_1_36]
          Length = 364

 Score = 45.2 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 41/247 (16%), Positives = 70/247 (28%), Gaps = 46/247 (18%)

Query: 44  LTASSLHAGHLTQLMLLFW---LQKTGH--KPISLMGGGTSIIGDPSFRDESRRMMRSQE 98
            T   LH GH      L     LQ +G   K    +    ++         +  M   ++
Sbjct: 13  PTGR-LHIGHYVG--SLRRRVELQNSGLYDKIFIFIADAQAL---------TDNMENPEK 60

Query: 99  IQENIEKIKGIFSSFIKY-----GTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRM 153
           +++N+          + Y        K+   + +    LC + +  +     S    N  
Sbjct: 61  VRQNV------IEVALDYLACGLDPTKSTIFIQSQIPELCELTFYYMDLVTVSRLQRNPT 114

Query: 154 LSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLG 213
           +  E      +    + F  F Y I QA D           + +G  DQ   I    ++ 
Sbjct: 115 VKTEIQMRNFETSIPVGF--FTYPISQAADITAFRA---TTVPVG-EDQEPMIEQAREIV 168

Query: 214 ERLK-------TPKLFALTSPL----LTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYW 261
            R               L        L    G  KM K+L   I+L+          +  
Sbjct: 169 RRFNYIYGETLVEPEILLPDNAACLRLPGTDGKAKMSKSLGNCIYLSDSADEVQKKVKSM 228

Query: 262 RNIDDAD 268
               D  
Sbjct: 229 YTDPDHL 235


>gi|109084888|ref|XP_001105363.1| PREDICTED: tryptophanyl-tRNA synthetase, cytoplasmic isoform 4
           [Macaca mulatta]
 gi|109084892|ref|XP_001105508.1| PREDICTED: tryptophanyl-tRNA synthetase, cytoplasmic isoform 6
           [Macaca mulatta]
          Length = 430

 Score = 45.2 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 39/248 (15%), Positives = 82/248 (33%), Gaps = 31/248 (12%)

Query: 15  RGFIHQISN-PRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +  + LD   ++     Y G   ++ ++H GHL   +   WLQ   + P+ +
Sbjct: 93  RGIFFSHRDMNQVLDAYENKKPFYLYTGRGPSSEAMHVGHLIPFIFTKWLQDVFNVPLVI 152

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                         D+ + + +   + +            I  G       + ++  ++ 
Sbjct: 153 -----------QMTDDEKYLWKDLTLDQAYGYAVENAKDIIACGFDINKTFIFSDLDYMG 201

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA--------YDFV 185
                   + +     + + ++F  V+       S S  + ++  +QA            
Sbjct: 202 --MSSGFYKNV---VKIQKHVTFNQVKGIFGFTDSDSIGKISFPAIQAAPSFSNSFPQIF 256

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTASGTKMGKTLS 242
           +   +  C +     DQ        D+  R+  PK   L +   P L  A  TKM  +  
Sbjct: 257 QDRTDIQCLIPC-AIDQDPYFRMTRDVAPRIGYPKPALLHSTFFPALQGAQ-TKMSASDP 314

Query: 243 G-AIWLNK 249
             +I+L  
Sbjct: 315 NSSIFLTD 322


>gi|255348967|ref|ZP_05380974.1| tryptophanyl-tRNA synthetase [Chlamydia trachomatis 70]
 gi|255503506|ref|ZP_05381896.1| tryptophanyl-tRNA synthetase [Chlamydia trachomatis 70s]
 gi|255507184|ref|ZP_05382823.1| tryptophanyl-tRNA synthetase [Chlamydia trachomatis D(s)2923]
          Length = 346

 Score = 45.2 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 40/235 (17%), Positives = 83/235 (35%), Gaps = 37/235 (15%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTG---HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH     ++  LQ      +    ++    ++        ++R+    +E+ 
Sbjct: 12  PTGK-LHLGHWIG-SIMSRLQLQNDSRYDCFFIIADLHTL------TTKTRK----EEVL 59

Query: 101 ENIEKIKGIFSSFIKYG-TGKTDALMLNNE--TWLCSIKYIDLLREIGSFFSVNRMLSFE 157
           +    I  + + ++  G   +  A+ L +             +L  +     +      E
Sbjct: 60  QIDNHIYDVLADWLSVGIDPEKSAIYLQSAIPEIYELNLIFSMLTPL--NHIMGIPSIKE 117

Query: 158 SVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK 217
             R+    E+SLS     Y +LQ+ D + LAK +   +   G D   ++    D+ +   
Sbjct: 118 MARNASLNEESLSHGLIGYPVLQSADIL-LAKAHLVPV---GKDNEAHVELTRDIAKTFN 173

Query: 218 TPKLFALTSP----------LLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYW 261
              L+    P           L   +G  KM K+ + AI+L+ +  +     +  
Sbjct: 174 R--LYGEVFPEPDILQGELTALVGTNGQGKMSKSANNAIYLSDDAKTVQEKIRKL 226


>gi|254460191|ref|ZP_05073607.1| ribosomal large subunit pseudouridine synthase [Rhodobacterales
           bacterium HTCC2083]
 gi|206676780|gb|EDZ41267.1| ribosomal large subunit pseudouridine synthase [Rhodobacteraceae
           bacterium HTCC2083]
          Length = 310

 Score = 45.2 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 23/47 (48%), Gaps = 1/47 (2%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
           E  +G  +  ++ +AG   S  EA R + +  I ++  II +  L +
Sbjct: 4   ETPKGDRIAKVLARAG-VASRREAERMIDAGRISVDGKIIDSPALNV 49


>gi|67970212|dbj|BAE01450.1| unnamed protein product [Macaca fascicularis]
          Length = 450

 Score = 45.2 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 39/248 (15%), Positives = 82/248 (33%), Gaps = 31/248 (12%)

Query: 15  RGFIHQISN-PRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +  + LD   ++     Y G   ++ ++H GHL   +   WLQ   + P+ +
Sbjct: 113 RGIFFSHRDMNQVLDAYENKKPFYLYTGRGPSSEAMHVGHLIPFIFTKWLQDVFNVPLVI 172

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                         D+ + + +   + +            I  G       + ++  ++ 
Sbjct: 173 -----------QMTDDEKYLWKDLTLDQAYGYAVENAKDIIACGFDINKTFIFSDLDYMG 221

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA--------YDFV 185
                   + +     + + ++F  V+       S S  + ++  +QA            
Sbjct: 222 --MSSGFYKNV---VKIQKHVTFNQVKGIFGFTDSDSIGKISFPAIQAAPSFSNSFPQIF 276

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTASGTKMGKTLS 242
           +   +  C +     DQ        D+  R+  PK   L +   P L  A  TKM  +  
Sbjct: 277 QDRTDIQCLIPC-AIDQDPYFRMTRDVAPRIGYPKPALLHSTFFPALQGAQ-TKMSASDP 334

Query: 243 G-AIWLNK 249
             +I+L  
Sbjct: 335 NSSIFLTD 342


>gi|313837599|gb|EFS75313.1| tryptophan--tRNA ligase [Propionibacterium acnes HL037PA2]
 gi|314927520|gb|EFS91351.1| tryptophan--tRNA ligase [Propionibacterium acnes HL044PA1]
 gi|314972538|gb|EFT16635.1| tryptophan--tRNA ligase [Propionibacterium acnes HL037PA3]
 gi|328907796|gb|EGG27559.1| tryptophan--tRNA ligase [Propionibacterium sp. P08]
          Length = 363

 Score = 45.2 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 41/242 (16%), Positives = 71/242 (29%), Gaps = 35/242 (14%)

Query: 22  SNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSI 80
           S+  E D+           G   T  SLH GH    +     LQ  G +   ++     +
Sbjct: 22  SDKVEADLAVHPDKWRILTGDRPTG-SLHIGHYFGSLANRVRLQDKGLESFLVIADY-QV 79

Query: 81  IGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDL 140
           I D     E    +++  +    + +              +    LN          +  
Sbjct: 80  IYDRDGVGE----LQTNVMSNIADYLAIGIDPARTTIFTHSALPALN-------QLLLPF 128

Query: 141 LREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGS 200
           L  +            + +      E+ +S L   + + QA D +    N    L   G 
Sbjct: 129 LSLVTDAELRRNPTVKDELS---TSERPMSGLMLTFPVHQAADILFCKAN----LVPVGR 181

Query: 201 DQWGNIICGIDLGERLKT--------------PKLFALTSPLLTTASGTKMGKTLSGAIW 246
           DQ  +I     +  R                 P+     +P +    GTKM K+   +I 
Sbjct: 182 DQLPHIEQTRVIARRFDERYGRGEASKPVFPEPEALLSATPHVLGLDGTKMSKSKGNSIE 241

Query: 247 LN 248
           L 
Sbjct: 242 LG 243


>gi|119952811|ref|YP_945020.1| tryptophanyl-tRNA synthetase [Borrelia turicatae 91E135]
 gi|119861582|gb|AAX17350.1| tryptophanyl-tRNA synthetase [Borrelia turicatae 91E135]
          Length = 351

 Score = 45.2 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 36/216 (16%), Positives = 69/216 (31%), Gaps = 25/216 (11%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
            T  SLH GH    ++     +  ++   ++    ++   P  +  +   +  +E+  + 
Sbjct: 12  PTG-SLHLGHYIGSIVNRLKYQEEYETYIIIADLHTLTTKPDLKSINEISVNVREMVLDY 70

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL 163
                       Y       L+  N      +  I ++  +    S+  M     +    
Sbjct: 71  LACGINPEKVNIYLQSAIPELLELNLI----LSMIVMVNRLQRIPSIKDMSVAAGL---- 122

Query: 164 KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK------ 217
             E     L   Y +L + D +    N    L   G D   +I    +L  +        
Sbjct: 123 -SEVPYGLL--GYPVLMSADILMTKAN----LVPVGRDNEAHIELTRELARKFNYLYGDF 175

Query: 218 --TPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKE 250
              P+     S  L    G  KM K+L  AI+L+ +
Sbjct: 176 FPIPEAIFTDSQALVGIYGKAKMSKSLGNAIFLSDD 211


>gi|156062356|ref|XP_001597100.1| hypothetical protein SS1G_01294 [Sclerotinia sclerotiorum 1980]
 gi|154696630|gb|EDN96368.1| hypothetical protein SS1G_01294 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 416

 Score = 45.2 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 30/229 (13%), Positives = 76/229 (33%), Gaps = 23/229 (10%)

Query: 18  IHQISNPRELDI--LCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMG 75
           + ++ +   +D   L  +  +  Y G   T    H G+   ++ +  L + G     L+ 
Sbjct: 18  LAEVLDGDIIDNVILKEKRPLKVYWGTATTGRP-HCGYFVPMIKIAELLRAGCTVKVLLA 76

Query: 76  GGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK---YGTGKTDALMLNNETWL 132
                +      D  +  +  + ++   +  + +  S ++       + + ++ ++    
Sbjct: 77  DIHGYL------DNMKAPL--ELVEYRAKYYERVIKSALRAVGVDLSRLEFVLGSSYQLN 128

Query: 133 CSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYD 192
                     E  +  +V +    E V+   + +   +     Y ++QA D   L    D
Sbjct: 129 KEYTMDRFKLEGITRINVAQKAGAEVVK---QTDDP-TLGGLIYPLMQALDEQYL----D 180

Query: 193 CRLQMGGSDQWGNIICGID-LGERLKTPKLFALTSPLLTTASGTKMGKT 240
              Q GG DQ        + L +     +   + + +       KM  +
Sbjct: 181 VDAQFGGVDQRKIFTFAKENLPKINYKVRAHLMNTMVPGLGEAAKMSSS 229


>gi|311261579|ref|XP_003128776.1| PREDICTED: tryptophanyl-tRNA synthetase, cytoplasmic-like [Sus
           scrofa]
          Length = 482

 Score = 45.2 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 38/248 (15%), Positives = 81/248 (32%), Gaps = 31/248 (12%)

Query: 15  RGFIHQISN-PRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +  + LD   ++     Y G   ++ ++H GHL   +   WLQ   + P+ +
Sbjct: 139 RGIFFSHRDMNQVLDAYENKKPFYLYTGRGPSSEAMHVGHLIPFIFTKWLQDVFNVPLVI 198

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                         D+ + + +   +++            I  G       + ++  ++ 
Sbjct: 199 -----------QMTDDEKYLWKELTLEQAHGYAVENAKDIIACGFDVNKTFIFSDLDYMG 247

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA--------YDFV 185
                   + +     + + ++F  V+       S    + ++  +QA            
Sbjct: 248 --MSPGFYKNV---VKIQKHVTFNQVKGIFGFTDSDCIGKISFPAIQAAPSFSSSFPQIF 302

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTASGTKMGKTLS 242
               +  C +     DQ        D+  R+  PK   L +   P L  A  TKM  +  
Sbjct: 303 RDRTDIQCLIPC-AIDQDPYFRMTRDVAPRIGYPKPALLHSTFFPALQGAQ-TKMSASDP 360

Query: 243 G-AIWLNK 249
             +I+L  
Sbjct: 361 NSSIFLTD 368


>gi|256785682|ref|ZP_05524113.1| tryptophanyl-tRNA synthetase [Streptomyces lividans TK24]
          Length = 337

 Score = 45.2 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 55/344 (15%), Positives = 98/344 (28%), Gaps = 59/344 (17%)

Query: 31  CSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG--HKPISLMGGGTSIIGDPSFRD 88
            +        G   T+ S H G+      +         H    ++    + I  P    
Sbjct: 1   MANERPRVLSGIQPTSGSFHLGNYLG--AVRQWVDMQDTHDAFYMVVDLHA-ITVPQDPK 57

Query: 89  ESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFF 148
           E R   R    Q     +     +          A +     WL  +  I    E     
Sbjct: 58  ELRENTRVAAAQLLAAGLDPDRCTLFVQSHVPEHAQL----GWL--MNCITGFGE----- 106

Query: 149 SVNRMLS-FESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNII 207
             +RM    +    +     ++    F Y +L   D + L +     +   G DQ  ++ 
Sbjct: 107 -ASRMTQFKDKSAKQGNDRTTVGL--FTYPMLMVADIL-LYQADQVPV---GEDQRQHLE 159

Query: 208 CGIDLGERLKTPKLFALTSPL--LTTASGT---------KMGKTLSGAIWLNKEMTSPYN 256
              DL +R       A T P   +   +           KM K+ +    L   +  P  
Sbjct: 160 LTRDLADRFNQTYGDAFTVPTAYILKETAKIYDLQDPTAKMSKSAATPKGLINLLDEPKA 219

Query: 257 FWQYWRN-IDDAD------------VVSFAKRLTTLPMSEIDRMAKL-QGKEINEAKKII 302
             +  ++ + D D            V +     +TL  +EI  + +  +GK     K  +
Sbjct: 220 TAKKVKSAVTDTDTVVRFDRETKPGVSNLLTIYSTLTGAEIAELERKYEGKGYGALKTDL 279

Query: 303 A----------TEITTMVHGREEAEKAATAAMECFDMSIHSQHM 336
           A           E T       E   A  A       S+ ++ +
Sbjct: 280 ADVVVEFVTPFRERTRQYLDDPETLDAILAKGAEKARSVAAETL 323


>gi|21223215|ref|NP_628994.1| tryptophanyl-tRNA synthetase [Streptomyces coelicolor A3(2)]
 gi|289769575|ref|ZP_06528953.1| tryptophanyl-tRNA synthetase [Streptomyces lividans TK24]
 gi|25009450|sp|Q9KZA7|SYW2_STRCO RecName: Full=Tryptophanyl-tRNA synthetase 2; AltName:
           Full=Tryptophan--tRNA ligase 2; Short=TrpRS 2
 gi|7649569|emb|CAB89058.1| tryptophanyl-tRNA synthetase [Streptomyces coelicolor A3(2)]
 gi|289699774|gb|EFD67203.1| tryptophanyl-tRNA synthetase [Streptomyces lividans TK24]
          Length = 339

 Score = 45.2 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 55/344 (15%), Positives = 98/344 (28%), Gaps = 59/344 (17%)

Query: 31  CSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG--HKPISLMGGGTSIIGDPSFRD 88
            +        G   T+ S H G+      +         H    ++    + I  P    
Sbjct: 3   MANERPRVLSGIQPTSGSFHLGNYLG--AVRQWVDMQDTHDAFYMVVDLHA-ITVPQDPK 59

Query: 89  ESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFF 148
           E R   R    Q     +     +          A +     WL  +  I    E     
Sbjct: 60  ELRENTRVAAAQLLAAGLDPDRCTLFVQSHVPEHAQL----GWL--MNCITGFGE----- 108

Query: 149 SVNRMLS-FESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNII 207
             +RM    +    +     ++    F Y +L   D + L +     +   G DQ  ++ 
Sbjct: 109 -ASRMTQFKDKSAKQGNDRTTVGL--FTYPMLMVADIL-LYQADQVPV---GEDQRQHLE 161

Query: 208 CGIDLGERLKTPKLFALTSPL--LTTASGT---------KMGKTLSGAIWLNKEMTSPYN 256
              DL +R       A T P   +   +           KM K+ +    L   +  P  
Sbjct: 162 LTRDLADRFNQTYGDAFTVPTAYILKETAKIYDLQDPTAKMSKSAATPKGLINLLDEPKA 221

Query: 257 FWQYWRN-IDDAD------------VVSFAKRLTTLPMSEIDRMAKL-QGKEINEAKKII 302
             +  ++ + D D            V +     +TL  +EI  + +  +GK     K  +
Sbjct: 222 TAKKVKSAVTDTDTVVRFDRETKPGVSNLLTIYSTLTGAEIAELERKYEGKGYGALKTDL 281

Query: 303 A----------TEITTMVHGREEAEKAATAAMECFDMSIHSQHM 336
           A           E T       E   A  A       S+ ++ +
Sbjct: 282 ADVVVEFVTPFRERTRQYLDDPETLDAILAKGAEKARSVAAETL 325


>gi|226305497|ref|YP_002765457.1| tryptophanyl-tRNA synthetase [Rhodococcus erythropolis PR4]
 gi|229489670|ref|ZP_04383533.1| tryptophan-tRNA ligase [Rhodococcus erythropolis SK121]
 gi|226184614|dbj|BAH32718.1| tryptophanyl-tRNA synthetase [Rhodococcus erythropolis PR4]
 gi|229323767|gb|EEN89525.1| tryptophan-tRNA ligase [Rhodococcus erythropolis SK121]
          Length = 344

 Score = 45.2 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 53/296 (17%), Positives = 90/296 (30%), Gaps = 45/296 (15%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   T+ S H G+    +  +   +        +    + I       E RR  +    Q
Sbjct: 18  GIQPTSDSFHLGNYLGALQQWVPLQDDFDAFYFIPDLHA-ITVTQDPKELRRRTKVAVAQ 76

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLS-FESV 159
                I    ++          A +     W        +L  I  F   +RM    +  
Sbjct: 77  LLAVGIDPDRATLFVQSQVPEHAQLA----W--------VLNCITGFGEASRMTQFKDKS 124

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             +     S+    F Y +L A D + L +     +   G DQ  ++    DL  R  T 
Sbjct: 125 AKQGSDNASVGL--FTYPVLMAADIL-LYRPQRVPV---GEDQRQHLELARDLAGRFNTR 178

Query: 220 KLFALTSPLLTTASGT-----------KMGKTLSGAIWLNKEMTSPYNFWQYWRN-IDDA 267
              A   P      GT           KM K+ + A  L   +  P    +  ++ + D 
Sbjct: 179 YGKAFVVPEPQIIKGTAKIYDLQDPTAKMSKSAASAAGLINLLDDPKVSAKKIKSAVTDN 238

Query: 268 D------------VVSFAKRLTTLPMSEIDR-MAKLQGKEINEAKKIIATEITTMV 310
           +            V +     + L    I+  +A  +GK   + K   A  +T  V
Sbjct: 239 EREIRFDPQAKPGVSNLLTIQSALSGVPIETLVAGYEGKGYGDLKTDTADVLTEFV 294


>gi|160890584|ref|ZP_02071587.1| hypothetical protein BACUNI_03027 [Bacteroides uniformis ATCC 8492]
 gi|270295720|ref|ZP_06201920.1| tryptophanyl-tRNA synthetase [Bacteroides sp. D20]
 gi|156859583|gb|EDO53014.1| hypothetical protein BACUNI_03027 [Bacteroides uniformis ATCC 8492]
 gi|270273124|gb|EFA18986.1| tryptophanyl-tRNA synthetase [Bacteroides sp. D20]
          Length = 364

 Score = 45.2 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 41/247 (16%), Positives = 70/247 (28%), Gaps = 46/247 (18%)

Query: 44  LTASSLHAGHLTQLMLLFW---LQKTGH--KPISLMGGGTSIIGDPSFRDESRRMMRSQE 98
            T   LH GH      L     LQ +G   K    +    ++         +  M   ++
Sbjct: 13  PTGR-LHIGHYVG--SLRRRVELQNSGLYDKIFIFIADAQAL---------TDNMENPEK 60

Query: 99  IQENIEKIKGIFSSFIKY-----GTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRM 153
           +++N+          + Y        K+   + +    LC + +  +     S    N  
Sbjct: 61  VRQNV------IEVALDYLACGLDPTKSTIFIQSQIPELCELTFYYMDLVTVSRLQRNPT 114

Query: 154 LSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLG 213
           +  E      +    + F  F Y I QA D           + +G  DQ   I    ++ 
Sbjct: 115 VKTEIQMRNFETSIPVGF--FTYPISQAADITAFRA---TTVPVG-EDQEPMIEQAREIV 168

Query: 214 ERLK-------TPKLFALTSPL----LTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYW 261
            R               L        L    G  KM K+L   I+L+          +  
Sbjct: 169 RRFNYIYGETLVEPEILLPDNAACLRLPGTDGKAKMSKSLGNCIYLSDSADEVQKKVKSM 228

Query: 262 RNIDDAD 268
               D  
Sbjct: 229 YTDPDHL 235


>gi|110678572|ref|YP_681579.1| lysyl-tRNA synthetase [Roseobacter denitrificans OCh 114]
 gi|123362157|sp|Q16AV0|SYK_ROSDO RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|109454688|gb|ABG30893.1| lysyl-tRNA synthetase [Roseobacter denitrificans OCh 114]
          Length = 527

 Score = 45.2 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 15/85 (17%), Positives = 26/85 (30%), Gaps = 6/85 (7%)

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            DF           +M G D   N      +   L        T  L    +G K+ K+ 
Sbjct: 236 PDFGARWAALGVDFEMYGKDHSTNTPIYDKICRILGQRPPEHFTYELFLDENGQKISKSS 295

Query: 242 SGAIWLNKEMT------SPYNFWQY 260
              + +++ +T        Y  +Q 
Sbjct: 296 GNGVSIDEWLTYASTESLSYFMYQK 320


>gi|218768466|ref|YP_002342978.1| tryptophanyl-tRNA synthetase [Neisseria meningitidis Z2491]
 gi|25009447|sp|Q9JTQ0|SYW_NEIMA RecName: Full=Tryptophanyl-tRNA synthetase; AltName:
           Full=Tryptophan--tRNA ligase; Short=TrpRS
 gi|121052474|emb|CAM08813.1| tryptophanyl-tRNA synthetase [Neisseria meningitidis Z2491]
          Length = 336

 Score = 45.2 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 38/218 (17%), Positives = 62/218 (28%), Gaps = 49/218 (22%)

Query: 174 FNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSP------ 227
           ++Y IL   D + +   ++  +   G DQ  ++    D+  R         T P      
Sbjct: 136 YSYPILMTADIL-MFNAHEVPV---GRDQIQHVEMARDIAGRFNHRFRELFTLPEVKIDE 191

Query: 228 ---LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWR---------NIDDAD-VVSFAK 274
              LL    G KM K+    I L +                         D   +    K
Sbjct: 192 NVELLVGLDGRKMSKSYGNTIPLWENDKKTQKSVNKIITNMKEPGEPKKPDESPLFEIYK 251

Query: 275 RLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQ 334
             +T   +         G    EAKK++A +I        E  +      E    +    
Sbjct: 252 AFSTPSETAEFTKMLADGLAWGEAKKLLAAKINA------ELAEPRERYNEL---TADPS 302

Query: 335 HMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHL 372
            +  I                 ++AG   +  EAR  L
Sbjct: 303 QIEEI-----------------LQAGAQKARKEARELL 323


>gi|330013704|ref|ZP_08307767.1| tryptophan--tRNA ligase [Klebsiella sp. MS 92-3]
 gi|328533370|gb|EGF60112.1| tryptophan--tRNA ligase [Klebsiella sp. MS 92-3]
          Length = 335

 Score = 45.2 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 37/227 (16%), Positives = 65/227 (28%), Gaps = 27/227 (11%)

Query: 33  QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRR 92
               T   G   T   LH GH    +      +  H+   L+     +       D    
Sbjct: 2   NHPQTILTGDRPTGQ-LHLGHYVGSLRQRVALQHDHQQFILIADLQGL------TDNGSN 54

Query: 93  MMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNR 152
               +     +E +    +  I      T   + +  + L  +  + +     +    N 
Sbjct: 55  PQ--KISHHILEVMADYLAVGID--PRLTTICLQSALSALAELSALYMNIVTVARVERNP 110

Query: 153 MLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL 212
            +  E  +    R   + FL   Y I QA D       +   L   G DQ   I    ++
Sbjct: 111 TVKNEIAQKGFARSLPVGFL--AYPISQAADITA----FKAELVPVGDDQLPMIEQTNEI 164

Query: 213 GERLK---TPKLFALTSPL------LTTASGT-KMGKTLSGAIWLNK 249
             ++       +      L      L    G  KM K+L   + L+ 
Sbjct: 165 VHKMNSLTGEPVLRHCKALLSEVSRLPGVDGNAKMSKSLGNTLTLSA 211


>gi|152997236|ref|YP_001342071.1| tryptophanyl-tRNA synthetase [Marinomonas sp. MWYL1]
 gi|150838160|gb|ABR72136.1| tryptophanyl-tRNA synthetase [Marinomonas sp. MWYL1]
          Length = 335

 Score = 45.2 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 53/343 (15%), Positives = 100/343 (29%), Gaps = 57/343 (16%)

Query: 50  HAGHLTQLM--LLFWLQKTGHKPISLMGGGTSII--GDPSFRDESRRMMRSQEIQEN--I 103
           H G+    +   +   ++   +    +    ++I   DP      R      EI      
Sbjct: 17  HLGNYVGAIRPAIEASRQDNTESFFFLADYHALIKCQDP-----ERVKQSRLEIAATWLA 71

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLS-FESVRSR 162
             +    ++F +       A +     WL        L  + +   +NR  +   +V   
Sbjct: 72  CGLDTDKATFYRQSDIPEIAEL----NWL--------LTCVTAKGLMNRAHAYKAAVDEN 119

Query: 163 LKREQ----SLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL------ 212
           L   Q      +   F Y +L A D +     +   +   G DQ  +I    D+      
Sbjct: 120 LANGQDPDFGTTMGLFCYPVLMAADILTFNA-HKVPV---GRDQIQHIEMARDIAGRFNH 175

Query: 213 ---GERLKTPKLFALTSPLLTTASGTKMGKTLSGAI-WLNKEMTSPYNFWQYWRNI---- 264
                 +    +      +L    G KM K+ +  I   + E        +   N+    
Sbjct: 176 LFGEHFVLPEAVVGEEGSILKGLDGRKMSKSYNNTIPLFDTEKQLQKGINKIKTNLLEPG 235

Query: 265 -----DDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKA 319
                +D+ V    K   T   +   R     G    EAKK    E+  +++G+    + 
Sbjct: 236 EAKDPEDSTVFDIYKAFATPEQTAQMRQNFADGIAWGEAKK----ELFALINGQ--LSEP 289

Query: 320 ATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFA 362
                E      H + +  +   K        +  L    G  
Sbjct: 290 REKYKELMANPAHVEEILQVGAEKARARARGRISDLRNAVGLV 332


>gi|148549617|ref|YP_001269719.1| tryptophanyl-tRNA synthetase [Pseudomonas putida F1]
 gi|148513675|gb|ABQ80535.1| tryptophanyl-tRNA synthetase [Pseudomonas putida F1]
          Length = 449

 Score = 45.2 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 44/282 (15%), Positives = 81/282 (28%), Gaps = 46/282 (16%)

Query: 50  HAGHLTQLM--LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIK 107
           H G+    +   +   Q+ G      +    ++I         R  +  +     +    
Sbjct: 16  HLGNYAGAIRPAIRASQQPGVDSFYFLADYHALIKCDDPLRIQRSRL--EIAATWLAG-- 71

Query: 108 GIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLS-FESVRSRLKRE 166
                    G                  +   LL  + +   +NR  +   SV   ++  
Sbjct: 72  ---------GLDPDKVTFYRQSDIPEIPELTWLLTCVAAKGLLNRAHAYKASVDKNVENG 122

Query: 167 Q----SLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL-----K 217
           +     ++   F+Y +L A D +    N   ++ +G  DQ  ++    D+G+R      +
Sbjct: 123 EDPDAGVTMGLFSYPVLMAADILMFNAN---KVPVG-RDQIQHVEMARDIGQRFNHLFGQ 178

Query: 218 TPKLFAL-------TSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNID----- 265
               FAL       +   L    G KM K+    I L        +              
Sbjct: 179 GKDFFALPEAVIEESVATLPGLDGRKMSKSYDNTIPLFTSAKDMKDAISRIVTDSRAPGE 238

Query: 266 --DADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKII 302
             D D              E     R   LQG    +AK+ +
Sbjct: 239 AKDPDNAHLFTLYQAFSTPEQCAGFREELLQGLGWGDAKQRL 280


>gi|163735221|ref|ZP_02142656.1| lysyl-tRNA synthetase [Roseobacter litoralis Och 149]
 gi|161391435|gb|EDQ15769.1| lysyl-tRNA synthetase [Roseobacter litoralis Och 149]
          Length = 527

 Score = 45.2 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 15/85 (17%), Positives = 26/85 (30%), Gaps = 6/85 (7%)

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            DF           +M G D   N      +   L        T  L    +G K+ K+ 
Sbjct: 236 PDFGARWAALGVDFEMYGKDHSTNTPIYDKICRILGQRPPEHFTYELFLDENGQKISKSS 295

Query: 242 SGAIWLNKEMT------SPYNFWQY 260
              + +++ +T        Y  +Q 
Sbjct: 296 GNGVSIDEWLTYASTESLSYFMYQK 320


>gi|282877997|ref|ZP_06286805.1| tryptophan--tRNA ligase [Prevotella buccalis ATCC 35310]
 gi|281299832|gb|EFA92193.1| tryptophan--tRNA ligase [Prevotella buccalis ATCC 35310]
          Length = 328

 Score = 45.2 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 45/304 (14%), Positives = 85/304 (27%), Gaps = 63/304 (20%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGG---TSIIGDPSFRDESRRMMRSQ 97
           G   T   LH G+    +  F   +  +  +  +      T+       +D +R ++   
Sbjct: 7   GIRPTG-YLHLGNYFGAVKSFIEMQDKYDCMFFIADWHSLTTRPKPEDIQDSARIILA-- 63

Query: 98  EIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFE 157
             +     I    +        K    +         +     + E+G   +        
Sbjct: 64  --EYLACGIDPQKAPIYVQSDVKETLEL------YLYLNMNAYIGELGRVTTFKE----- 110

Query: 158 SVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGID----LG 213
             ++R ++  +++   F Y  L A D ++  +     +   G DQ  N+           
Sbjct: 111 --KAR-QQPDNVNAGLFTYPTLMAADILQ-HRAKKVPV---GKDQEQNMEMARKCASRFN 163

Query: 214 ERLK----TPKL------FALTSPLLTTASGTKMGKTLSGAIWL-NKEMTSPYNFWQYWR 262
                              AL  P L  +   KMGK+    I+L + + T      +   
Sbjct: 164 RIYGVDFFPEPQNFYFNSQALKVPGLDGSG--KMGKSTGNCIYLHDDDKT----ISKKVM 217

Query: 263 N-IDD--------ADVVSFAKRLTTLPMSEIDR-----MAKLQGKEIN--EAKKIIATEI 306
             + D                  T L +            K     I   + KK IA +I
Sbjct: 218 KAVTDGGPEKANSEKPEVIENLFTFLRICSTQDTYDYFDEKWNDCSIRYGDLKKQIAADI 277

Query: 307 TTMV 310
              V
Sbjct: 278 CATV 281


>gi|26988046|ref|NP_743471.1| tryptophanyl-tRNA synthetase [Pseudomonas putida KT2440]
 gi|37999410|sp|Q88NA1|SYW_PSEPK RecName: Full=Tryptophanyl-tRNA synthetase; AltName:
           Full=Tryptophan--tRNA ligase; Short=TrpRS
 gi|24982768|gb|AAN66935.1|AE016322_2 tryptophanyl-tRNA synthetase, putative [Pseudomonas putida KT2440]
          Length = 449

 Score = 45.2 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 44/282 (15%), Positives = 81/282 (28%), Gaps = 46/282 (16%)

Query: 50  HAGHLTQLM--LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIK 107
           H G+    +   +   Q+ G      +    ++I         R  +  +     +    
Sbjct: 16  HLGNYAGAIRPAIRASQQPGVDSFYFLADYHALIKCDDPLRIQRSRL--EIAATWLAG-- 71

Query: 108 GIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLS-FESVRSRLKRE 166
                    G                  +   LL  + +   +NR  +   SV   ++  
Sbjct: 72  ---------GLDPDKVTFYRQSDIPEIPELTWLLTCVAAKGLLNRAHAYKASVDKNVENG 122

Query: 167 Q----SLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL-----K 217
           +     ++   F+Y +L A D +    N   ++ +G  DQ  ++    D+G+R      +
Sbjct: 123 EDPDAGVTMGLFSYPVLMAADILMFNAN---KVPVG-RDQIQHVEMARDIGQRFNHLFGQ 178

Query: 218 TPKLFAL-------TSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNID----- 265
               FAL       +   L    G KM K+    I L        +              
Sbjct: 179 GKDFFALPEAVIEESVATLPGLDGRKMSKSYDNTIPLFTSAKDMKDAISRIVTDSRAPGE 238

Query: 266 --DADVVSFAKRLTTLPMSEI---DRMAKLQGKEINEAKKII 302
             D D              E     R   LQG    +AK+ +
Sbjct: 239 AKDPDNAHLFTLYQAFSTPEQCAGFREELLQGLGWGDAKQRL 280


>gi|225549334|ref|ZP_03770307.1| tryptophanyl-tRNA synthetase [Borrelia burgdorferi 94a]
 gi|225370192|gb|EEG99632.1| tryptophanyl-tRNA synthetase [Borrelia burgdorferi 94a]
          Length = 352

 Score = 45.2 bits (106), Expect = 0.022,   Method: Composition-based stats.
 Identities = 29/219 (13%), Positives = 71/219 (32%), Gaps = 30/219 (13%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRD-ESRRMMRSQEIQEN 102
            T + LH GH    ++     +  ++   ++    ++   P  +   +      + + + 
Sbjct: 12  PTGA-LHLGHYVGSVVNRLKFQEEYETYFIIADLHTLTTKPDLKSINTIPSNVREMVLDY 70

Query: 103 IEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR 162
           +          I   +   +   L+            ++  +     +  +   +     
Sbjct: 71  LACGINPDKVSIYLQSAIPELFELH--------LIFSMIVTVARLQRIPSI--KDM---S 117

Query: 163 LKRE-QSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--- 218
           +    + +++    Y +L + D +    N    L   G D   +I    +L  R      
Sbjct: 118 IAAGLKEITYGLLGYPVLMSADILMTKAN----LVPVGRDNESHIEFARELARRFNHLYK 173

Query: 219 -------PKLFALTSPLLTTASGTKMGKTLSGAIWLNKE 250
                    +F  + PL+      KM K+L+ AI+LN +
Sbjct: 174 NNFFPIPESVFTDSRPLVGIYGKNKMSKSLNNAIFLNDD 212


>gi|50303139|ref|XP_451507.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49640638|emb|CAH03095.1| KLLA0A11660p [Kluyveromyces lactis]
          Length = 482

 Score = 45.2 bits (106), Expect = 0.022,   Method: Composition-based stats.
 Identities = 22/122 (18%), Positives = 43/122 (35%), Gaps = 10/122 (8%)

Query: 299 KKIIATEITTMVHGREEAE-------KAATAAMECFDMSIHSQHMPTISISKDEVSRGMG 351
           +K  + + T   HG    E       +    ++   D S+    +    I     +    
Sbjct: 44  QKWTSKQETRAYHGEHLTESRWQSVFEPQLNSVAQLDASLRGGDIEPTPILLQTYAVLEK 103

Query: 352 LLT-LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG-NIKLSF-GK 408
            L   + +A FA+S  +AR+ +    + +N   I++    +K  D  +      L   G 
Sbjct: 104 RLDFALFRAMFASSVRQARQFILHGNVHVNGVKITSPGYALKAGDVFNVRPEKVLQALGA 163

Query: 409 KN 410
           K 
Sbjct: 164 KK 165


>gi|289525630|emb|CBJ15108.1| tryptophanyl-tRNA synthetase [Chlamydia trachomatis Sweden2]
 gi|296435192|gb|ADH17370.1| tryptophanyl-tRNA synthetase [Chlamydia trachomatis E/150]
 gi|296438911|gb|ADH21064.1| tryptophanyl-tRNA synthetase [Chlamydia trachomatis E/11023]
          Length = 346

 Score = 45.2 bits (106), Expect = 0.022,   Method: Composition-based stats.
 Identities = 39/233 (16%), Positives = 84/233 (36%), Gaps = 33/233 (14%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTG---HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH     ++  LQ      +    ++    ++        ++R+    +E+ 
Sbjct: 12  PTGK-LHLGHWIG-SIMSRLQLQNDSRYDCFFIIADLHTL------TTKTRK----EEVL 59

Query: 101 ENIEKIKGIFSSFIKYG-TGKTDALMLNNE--TWLCSIKYIDLLREIGSFFSVNRMLSFE 157
           +    I  + + ++  G   +  A+ L +             +L  +     +      E
Sbjct: 60  QIDNHIYDVLADWLSVGIDPEKSAIYLQSAIPEIYELNLIFSMLTPL--NHIMGIPSIKE 117

Query: 158 SVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK 217
             R+    E+SLS     Y +LQ+ D + LAK +   +   G D   ++    D+ +   
Sbjct: 118 MARNASLNEESLSHGLIGYPVLQSADIL-LAKAHLVPV---GKDNEAHVELTRDIAKTFN 173

Query: 218 T--PKLF-------ALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYW 261
               ++F          + L+ T    KM K+ + AI+L+ +  +     +  
Sbjct: 174 RLCGEVFPEPDILQGELTALVGTNGQGKMSKSANNAIYLSDDAKTVQEKIRKL 226


>gi|308163294|gb|EFO65644.1| Tryptophanyl-tRNA synthetase [Giardia lamblia P15]
          Length = 432

 Score = 45.2 bits (106), Expect = 0.022,   Method: Composition-based stats.
 Identities = 24/140 (17%), Positives = 48/140 (34%), Gaps = 11/140 (7%)

Query: 15  RGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG  +   +  E      +G  +  Y G   ++ +LH GHL   +   +LQ      + +
Sbjct: 48  RGLFYAHRDFEEFLNYYEKGHPIYIYTGRGPSSGALHLGHLLPFIFTKYLQDAFKCYVVI 107

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                  I D      +R +  ++      E IK I +    +   KT   +  N  +L 
Sbjct: 108 ------QITDDEKFLRNRGLSYTEVDAYTSENIKDIIA--CGFDPDKTLIFI--NSQYLG 157

Query: 134 SIKYIDLLREIGSFFSVNRM 153
                     +     ++++
Sbjct: 158 LKNRYRFSCLVDRMLPISQL 177


>gi|301764170|ref|XP_002917509.1| PREDICTED: tryptophanyl-tRNA synthetase, cytoplasmic-like
           [Ailuropoda melanoleuca]
          Length = 476

 Score = 45.2 bits (106), Expect = 0.022,   Method: Composition-based stats.
 Identities = 39/248 (15%), Positives = 81/248 (32%), Gaps = 31/248 (12%)

Query: 15  RGFIHQISN-PRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +  + LD   ++     Y G   ++ ++H GHL   +   WLQ   + P+ +
Sbjct: 139 RGIFFSHRDVNQILDAYENKKPFYLYTGRGPSSEAMHVGHLIPFIFTKWLQDVFNVPLVI 198

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                         D+ + + +   + +            I  G       + ++  ++ 
Sbjct: 199 -----------QMTDDEKYLWKDLTLDQAYGYAVENAKDIIACGFDINKTFIFSDLDYMG 247

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA--------YDFV 185
                   + +     + + ++F  V+       S S  + ++  +QA            
Sbjct: 248 --MSPGFYKNV---VKIQKHVTFNQVKGIFGFTDSDSIGKISFPAIQAAPSFSNSFPQIF 302

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTASGTKMGKTLS 242
               +  C +     DQ        D+  R+  PK   L +   P L  A  TKM  +  
Sbjct: 303 RDRADIQCLIPC-AIDQDPYFRMTRDVAPRIGYPKPALLHSTFFPALQGAQ-TKMSASDP 360

Query: 243 G-AIWLNK 249
             +I+L  
Sbjct: 361 NSSIFLTD 368


>gi|320008983|gb|ADW03833.1| tryptophanyl-tRNA synthetase [Streptomyces flavogriseus ATCC 33331]
          Length = 337

 Score = 45.2 bits (106), Expect = 0.022,   Method: Composition-based stats.
 Identities = 48/296 (16%), Positives = 95/296 (32%), Gaps = 45/296 (15%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   TA S H G+    +  +   +  H    ++    + I  P    E R         
Sbjct: 11  GIQPTAGSFHLGNYLGAVRQWVALQESHDAFYMVVDLHA-ITVPQDPKELR--------- 60

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLS-FESV 159
               ++             +    + ++      + +I  +  +  F   +RM    +  
Sbjct: 61  -ANTRLAAAQLLAAGLDPERCTLFVQSHVPEHAQLGWI--MNCLTGFGEASRMTQFKDKS 117

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT- 218
             +     ++    F Y +LQ  D + L +     +   G DQ  +I    DL ER  + 
Sbjct: 118 AKQGADRATVGL--FTYPVLQVADIL-LYQANQVPV---GEDQRQHIELTRDLAERFNSR 171

Query: 219 -PKLFALTSPLLTTASGT---------KMGKTLSGAIWLNKEMTSPYNFWQYWRN-IDDA 267
               F + +P +   +           KM K+ S    L   +  P    +  R+ + D 
Sbjct: 172 FGPTFTVPAPYILKETAKIFDLQDPAIKMSKSASTPKGLINLLDDPKVTAKKVRSAVTDT 231

Query: 268 D-VVSF-----------AKRLTTLPMSEIDRMAKL-QGKEINEAKKIIATEITTMV 310
           D V+ +               +TL  + +  + +  +GK     K  +A  +   V
Sbjct: 232 DTVIRYDAEKKPGVSNLLSIYSTLTGTAVPDLEQKYEGKGYGALKTDLAEVMVEFV 287


>gi|257421998|ref|ZP_05598988.1| tryptophanyl-tRNA synthetase [Enterococcus faecalis X98]
 gi|257163822|gb|EEU93782.1| tryptophanyl-tRNA synthetase [Enterococcus faecalis X98]
 gi|315155645|gb|EFT99661.1| tryptophan--tRNA ligase [Enterococcus faecalis TX0043]
          Length = 334

 Score = 45.2 bits (106), Expect = 0.022,   Method: Composition-based stats.
 Identities = 53/342 (15%), Positives = 100/342 (29%), Gaps = 55/342 (16%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
            T   LH GH    +      +        +     +I D      +      +++  N+
Sbjct: 10  PTGK-LHLGHYVGSLKKRVEMQADPTNQLFV-----MIADLQ--ALTDNAKNPEKVSVNV 61

Query: 104 EKIKGIFSSFIKY-----GTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
                     + Y        KT   + +    L  +    L     S    N  +  E 
Sbjct: 62  ------LEVALDYLAVGLDPTKTTIFIQSQIPQLAELTMYYLNLVTTSRVRRNPTVKAEI 115

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
            + +        F  F Y + QA D       +   L   G DQ   +    ++      
Sbjct: 116 EQKKFGEGVPTGF--FIYPVSQAADITA----FQANLVPVGEDQKPMLEQAQEIVHSFNQ 169

Query: 219 PKLFALTSP----------LLTTASGT-KMGKTLSGAIWLNKEMT--SPYNFWQYW---- 261
                L  P           L    G  KM K+L   I+L+             Y     
Sbjct: 170 TYGEVLVRPEAVLPPKGMGRLPGIDGNGKMSKSLGNGIYLSDPAEVVQKKVMSMYTDPNH 229

Query: 262 RNIDD------ADVVSFAKRL--TTLPMSEIDRMAKLQGKEINEAKK----IIATEITTM 309
             I+D        V ++          + E+    +  G    + K+    ++  E+  +
Sbjct: 230 IRIEDPGQVEGNMVFTYLDVFGKNKEYIEELKEHYRHGGLGDVKIKRYLIDVLEEELAPI 289

Query: 310 VHGREEAEKAATAAME-CFDMSIHSQHMPTISISKDEVSRGM 350
              REE  K   A ME     S+ ++ +   ++++ + + G+
Sbjct: 290 RRRREELAKNPEAIMEMLHKGSLAAEKVAAQTLTEVKKAMGI 331


>gi|227506077|ref|ZP_03936126.1| S4 domain protein [Corynebacterium striatum ATCC 6940]
 gi|227197359|gb|EEI77407.1| S4 domain protein [Corynebacterium striatum ATCC 6940]
          Length = 95

 Score = 45.2 bits (106), Expect = 0.022,   Method: Composition-based stats.
 Identities = 10/60 (16%), Positives = 23/60 (38%), Gaps = 4/60 (6%)

Query: 336 MPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           M  +SI  D +  G  +      A    +  EA+  +    +++N  +++     +   D
Sbjct: 1   MLEVSIKGDSIKLGQFI----KLASLVATGGEAKELIAQGEVQVNGEVVTQRGATLHPGD 56


>gi|53715320|ref|YP_101312.1| tryptophanyl-tRNA synthetase II [Bacteroides fragilis YCH46]
 gi|60683253|ref|YP_213397.1| tryptophanyl-tRNA synthetase II [Bacteroides fragilis NCTC 9343]
 gi|253567210|ref|ZP_04844660.1| tryptophanyl-tRNA synthetase II [Bacteroides sp. 3_2_5]
 gi|265767806|ref|ZP_06095338.1| tryptophanyl-tRNA synthetase [Bacteroides sp. 2_1_16]
 gi|52218185|dbj|BAD50778.1| tryptophanyl-tRNA synthetase [Bacteroides fragilis YCH46]
 gi|60494687|emb|CAH09488.1| putative tryptophanyl-tRNA synthetase [Bacteroides fragilis NCTC
           9343]
 gi|251944041|gb|EES84560.1| tryptophanyl-tRNA synthetase II [Bacteroides sp. 3_2_5]
 gi|263252478|gb|EEZ24006.1| tryptophanyl-tRNA synthetase [Bacteroides sp. 2_1_16]
 gi|301164772|emb|CBW24331.1| putative tryptophanyl-tRNA synthetase [Bacteroides fragilis 638R]
          Length = 363

 Score = 45.2 bits (106), Expect = 0.022,   Method: Composition-based stats.
 Identities = 41/246 (16%), Positives = 74/246 (30%), Gaps = 46/246 (18%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGH--KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +     LQ +G   K    +    ++         +  +   ++++
Sbjct: 13  PTGK-LHIGHYVGSLKRRVELQNSGSFDKTFIFIADAQAL---------TDNIDNPEKVR 62

Query: 101 ENIEKIKGIFSSFIKY-----GTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLS 155
           +N+          + Y        K+   + +    LC + +  +     S    N  + 
Sbjct: 63  QNV------IEVALDYLACGLDPEKSTIFIQSQIPELCELTFYYMDLVTVSRLQRNPTVK 116

Query: 156 FESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER 215
            E      +    + F  F Y I QA D     +     +   G DQ   I    ++  R
Sbjct: 117 TEIQMRNFETSIPVGF--FTYPISQAADITA-FRATTVPV---GEDQEPMIEQAREIVRR 170

Query: 216 LK-------TPKLFALTSPL----LTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
                          L        L    G  KM K+L   I+L +E        +   +
Sbjct: 171 FNYIYGETLVEPEILLPDNAACLRLPGTDGKAKMSKSLGNCIYLAEEAD---EIQKKVMS 227

Query: 264 I-DDAD 268
           +  D D
Sbjct: 228 MFTDPD 233


>gi|94986465|ref|YP_594398.1| tryptophanyl-tRNA synthetase [Lawsonia intracellularis PHE/MN1-00]
 gi|94730714|emb|CAJ54076.1| Tryptophanyl-tRNA synthetase [Lawsonia intracellularis PHE/MN1-00]
          Length = 335

 Score = 45.2 bits (106), Expect = 0.022,   Method: Composition-based stats.
 Identities = 46/305 (15%), Positives = 82/305 (26%), Gaps = 53/305 (17%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   T   LH GH    +  +   +   + +  +    ++  D +     +  +    I 
Sbjct: 18  GMRPTGR-LHLGHYFGAIKSWLSMQQEIEALFFVADWHALTSDYANTTHLKEYIYDLVID 76

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
                I       I +   K       N               +G    ++  L      
Sbjct: 77  WLASGIDP--HQSIIFQQSKVPQHAELNL-------------LLGMITPLSW-LERNPTY 120

Query: 161 SRLKREQSLSFLEFN------YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
              +++Q ++  +        Y +L A D + L +     +   G DQ  ++    ++  
Sbjct: 121 K--EQQQEITTKDLGNFGFLGYPVLMAADIL-LYRPQLVPV---GQDQLPHLELTREIAR 174

Query: 215 RLKT-------PKLFALTSPL-LTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYW----- 261
           R               LT         G KM K+   AI+LN       +  +       
Sbjct: 175 RFNNLYGTIFAEPKAKLTPTAKCPGLDGRKMSKSYGNAIFLNDSFDEVTHKVKKMYTDPA 234

Query: 262 -RNIDD---ADVVSFA----KRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTM---V 310
                D    DV +         T     EI            E KKI+   +       
Sbjct: 235 RLRKSDPGNPDVCNLFPYHQLLTTPYIQDEIREGCVTATLGCVECKKILLQSLKEFLNPF 294

Query: 311 HGREE 315
           H R  
Sbjct: 295 HERRA 299


>gi|54113339|gb|AAV29303.1| NT02FT1947 [synthetic construct]
          Length = 334

 Score = 45.2 bits (106), Expect = 0.022,   Method: Composition-based stats.
 Identities = 22/93 (23%), Positives = 36/93 (38%), Gaps = 16/93 (17%)

Query: 166 EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL--------GERLK 217
           ++ ++   FNY +L A D +     +D  L   G DQ  +I    D+         + + 
Sbjct: 128 DKGITMGLFNYPVLMAADILI----FDADLVPVGKDQIQHIEIARDIANRFNHIYQKPVL 183

Query: 218 TPKLFALTS---PLLTTASGTKMGKTLSGAIWL 247
                ALTS     +    G KM K+    I +
Sbjct: 184 KAPQ-ALTSEDSQTILGLDGRKMSKSYDNTIAI 215


>gi|255944635|ref|XP_002563085.1| Pc20g05510 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211587820|emb|CAP85880.1| Pc20g05510 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 435

 Score = 44.8 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 40/230 (17%), Positives = 77/230 (33%), Gaps = 36/230 (15%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSF 86
           LD          Y G   ++ S+H GH        WLQ     P+ +M            
Sbjct: 97  LDKHEKGEPFFLYTGRGPSSDSMHVGHTVPFEFTKWLQDVFDVPLVIM-----------M 145

Query: 87  RDESRRMMRSQ-EIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIG 145
            D+ + M   + EI+++    K      I  G       + ++  ++    Y ++ R + 
Sbjct: 146 TDDEKFMHSQKIEIEDSKRYTKANAKDIIAVGFDMKKTFIFSDFEFIGGAFYENMCR-MA 204

Query: 146 SFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ-----AYDFVELAKNYD-------C 193
              ++N+      V+       S +  EF++   Q     +  F  +            C
Sbjct: 205 KRITINQ------VKGTFGFNDSNNIGEFHFCATQSAAAFSTSFPHIFGTEKKKVASIPC 258

Query: 194 RLQMGGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTASGTKMGKT 240
            +     DQ        +  E++K  K   + ++  P L    G+KM  +
Sbjct: 259 LIPC-AIDQDPYFRQCREHAEKMKFKKPSLIHSIFLPALQGP-GSKMSAS 306


>gi|183602198|ref|ZP_02963565.1| tryptophanyl-tRNA synthetase [Bifidobacterium animalis subsp.
           lactis HN019]
 gi|219682559|ref|YP_002468942.1| tryptophanyl-tRNA synthetase [Bifidobacterium animalis subsp.
           lactis AD011]
 gi|219683401|ref|YP_002469784.1| tryptophanyl-tRNA synthetase [Bifidobacterium animalis subsp.
           lactis AD011]
 gi|241190137|ref|YP_002967531.1| Tryptophanyl-tRNA synthetase [Bifidobacterium animalis subsp.
           lactis Bl-04]
 gi|241195543|ref|YP_002969098.1| Tryptophanyl-tRNA synthetase [Bifidobacterium animalis subsp.
           lactis DSM 10140]
 gi|183218412|gb|EDT89056.1| tryptophanyl-tRNA synthetase [Bifidobacterium animalis subsp.
           lactis HN019]
 gi|219620209|gb|ACL28366.1| tryptophanyl-tRNA synthetase [Bifidobacterium animalis subsp.
           lactis AD011]
 gi|219621051|gb|ACL29208.1| tryptophanyl-tRNA synthetase [Bifidobacterium animalis subsp.
           lactis AD011]
 gi|240248529|gb|ACS45469.1| Tryptophanyl-tRNA synthetase [Bifidobacterium animalis subsp.
           lactis Bl-04]
 gi|240250097|gb|ACS47036.1| Tryptophanyl-tRNA synthetase [Bifidobacterium animalis subsp.
           lactis DSM 10140]
 gi|295793124|gb|ADG32659.1| Tryptophanyl-tRNA synthetase [Bifidobacterium animalis subsp.
           lactis V9]
          Length = 367

 Score = 44.8 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 51/366 (13%), Positives = 109/366 (29%), Gaps = 66/366 (18%)

Query: 22  SNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSI 80
           S+     +  + G  T   G   T   LH GH    +     +Q  G     ++      
Sbjct: 27  SDETLAKLKANPGKFTMLTGDRPTGR-LHLGHFFGSIRERVAMQNLGVNTNIIIADY--- 82

Query: 81  IGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY----GTGKTDALMLNNETWLCSIK 136
                      +++  ++  E+I+    + +  + Y       +   +  ++     +  
Sbjct: 83  -----------QVITDRDTTEHID--DNVLNLVLDYMAAGIDPEKTMIFTHSAVPAENQL 129

Query: 137 YIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDFVELAKNYDCRL 195
            +  L  +             +V+S ++    +L+ L   Y + QA D   L    +   
Sbjct: 130 MLPFLSLVTEAELHRNP----TVKSEMESSGHALTGLLLTYPVHQACD--ILFCKANVV- 182

Query: 196 QMGGSDQWGNIICGIDLGERLKT----------PKLFALT-SPLLTTASGTKMGKTLSGA 244
              G D   ++     +  R                  L+ +P +    G KM K+   +
Sbjct: 183 -PIGKDNLPHVEITRTIARRFNERYAKKNPVFPEPAAILSEAPEIPGLDGRKMSKSYGNS 241

Query: 245 IWLNKEMTSPYNFWQYWRNIDDAD------------VVSFAK---RLTTLPMSEIDRMAK 289
           I L           +   +  D++            V +       +T    SEI   A+
Sbjct: 242 IMLGATAEETAKLIKK--SPTDSERTITFDPVNRPQVSALLTTAGLVTGRDPSEIA--AE 297

Query: 290 LQGKEINEAKKIIATEITTMV--HGREEAEKAAT---AAMECFDMSIHSQHMPTISISKD 344
           +        KK +   +   +  H    AE A           D +  +  +   ++ + 
Sbjct: 298 IGNAGAGALKKYVIDSVNEFLAPHRERRAELAKDMDSVRDILHDGNARANAIANQTLDEV 357

Query: 345 EVSRGM 350
             + GM
Sbjct: 358 REAMGM 363


>gi|38197552|gb|AAH61752.1| Wars protein [Rattus norvegicus]
          Length = 379

 Score = 44.8 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 39/248 (15%), Positives = 84/248 (33%), Gaps = 31/248 (12%)

Query: 15  RGFIHQISN-PRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +  + LD   ++     Y G   ++ ++H GHL   +   WLQ     P+ +
Sbjct: 93  RGIFFSHRDMNQILDAYENKKPFYLYTGRGPSSEAMHLGHLVPFIFTKWLQDVFDVPLVI 152

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                         D+ + + +   +++            I  G       + ++  ++ 
Sbjct: 153 -----------QMSDDEKYLWKDLTLEQAYSYTVENAKDIIACGFDVNKTFIFSDLEYMG 201

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA-----YDFVELA 188
                   + +     + + ++F  V+       S    + ++  +QA       F ++ 
Sbjct: 202 Q--SPGFYKNV---VKIQKHVTFNQVKGIFGFTDSDCIGKISFPAVQAAPSFSNSFPKIF 256

Query: 189 K---NYDCRLQMGGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTASGTKMGKTLS 242
           +   +  C +     DQ        D+  R+  PK   L +   P L  A  TKM  +  
Sbjct: 257 RDRTDIQCLIPC-AIDQDPYFRMTRDVAPRIGHPKPALLHSTFFPALQGAQ-TKMSASDP 314

Query: 243 G-AIWLNK 249
             +I+L  
Sbjct: 315 NSSIFLTD 322


>gi|83313225|ref|YP_423489.1| 16S rRNA uridine-516 pseudouridylate synthase and related
           pseudouridylate synthase [Magnetospirillum magneticum
           AMB-1]
 gi|82948066|dbj|BAE52930.1| 16S rRNA uridine-516 pseudouridylate synthase and related
           pseudouridylate synthase [Magnetospirillum magneticum
           AMB-1]
          Length = 348

 Score = 44.8 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 24/59 (40%), Gaps = 1/59 (1%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLS 405
           S G  +   + +AG   S  EA R ++   + +N   +S+    +   D      I LS
Sbjct: 49  SEGERIAKRLARAGLC-SRREAERWIEDGRVTVNGHRLSSPACVVGPGDIVIVDGIPLS 106


>gi|329957331|ref|ZP_08297851.1| tryptophan--tRNA ligase [Bacteroides clarus YIT 12056]
 gi|328523044|gb|EGF50147.1| tryptophan--tRNA ligase [Bacteroides clarus YIT 12056]
          Length = 364

 Score = 44.8 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 43/244 (17%), Positives = 71/244 (29%), Gaps = 40/244 (16%)

Query: 44  LTASSLHAGHLTQLMLLFW---LQKTGH--KPISLMGGGTSIIGDPSFRDESRRMMRSQE 98
            T   LH GH      L     LQ +G   K    +    ++         +  M   ++
Sbjct: 13  PTGR-LHIGHYVG--SLRRRVELQNSGLYDKTFVFIADAQAL---------TDNMENPEK 60

Query: 99  IQENIEKIKGIFSSFIKY-----GTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRM 153
           +++N+          + Y        K+   + +    LC + +  +     S    N  
Sbjct: 61  VRQNV------IEVALDYLACGLDPAKSTIFIQSQIPELCELTFYYMDLVTVSRLQRNPT 114

Query: 154 LSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRL---QMGGSDQ------WG 204
           +  E      +    + F  F Y I QA D     +     +   Q    +Q        
Sbjct: 115 VKTEIQMRNFETSIPVGF--FTYPISQAADITA-FRATTVPVGEDQEPMIEQAREIVRRF 171

Query: 205 NIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNI 264
           N I G  L E        A    L  T    KM K+L   I+L+          +     
Sbjct: 172 NFIYGDTLVEPEILLPDNAACLRLPGTDGKAKMSKSLGNCIYLSDTADEVQKKVKSMYTD 231

Query: 265 DDAD 268
            D  
Sbjct: 232 PDHL 235


>gi|88801998|ref|ZP_01117526.1| tryptophanyl-tRNA synthetase [Polaribacter irgensii 23-P]
 gi|88782656|gb|EAR13833.1| tryptophanyl-tRNA synthetase [Polaribacter irgensii 23-P]
          Length = 322

 Score = 44.8 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 37/233 (15%), Positives = 73/233 (31%), Gaps = 35/233 (15%)

Query: 50  HAGHLTQLML--LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIK 107
           H G+L   +L  +       ++    +    S+      +    +          +    
Sbjct: 15  HLGNLLGAILPAIAMANDPENEAYLFIADMHSLTQIKDGK--ELKENTYSTAATWLACGL 72

Query: 108 GIFSS-FIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE 166
            I  + F +       A +    TW            +  +F   R+    S + +  R 
Sbjct: 73  DIHKTVFYRQSDIPQTAEL----TWY-----------LSCYFPFQRLTLAHSFKDKADRL 117

Query: 167 QSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKLFAL 224
           + ++   F Y +L A D +     YD  +   G DQ  ++    D+  R+     + F L
Sbjct: 118 EDVNAGLFTYPMLMAADILL----YDAEIVPVGKDQLQHLEITRDVANRINNLLGETFVL 173

Query: 225 T-------SPLLTTASGTKMGKTLSG--AIWLNKEMTSPYNFWQYWRNIDDAD 268
                   + L+    G KM K+      I+LN +            ++   D
Sbjct: 174 PQAKIQEHTKLVPGTDGEKMSKSRENTINIFLNDKKLRKQIMGIKTDSLALED 226


>gi|216263852|ref|ZP_03435846.1| tryptophanyl-tRNA synthetase [Borrelia afzelii ACA-1]
 gi|215979896|gb|EEC20718.1| tryptophanyl-tRNA synthetase [Borrelia afzelii ACA-1]
          Length = 346

 Score = 44.8 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 31/218 (14%), Positives = 66/218 (30%), Gaps = 28/218 (12%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRD-ESRRMMRSQEIQEN 102
            T + LH GH    ++     +  ++   ++    ++   P  +   +      + + + 
Sbjct: 12  PTGA-LHLGHYVGSVVNRLKFQEEYETYFIIADLHTLTTKPDLKSINTIPFNVREMVLDY 70

Query: 103 IEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR 162
           +          I   +   +   L             ++  +     +  +         
Sbjct: 71  LACGINPNKVSIYLQSAIPELFELY--------LIFSMIVTVARLQRIPSIKDMSIAAG- 121

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT---- 218
             +E     L   Y +L + D +    N    L   G D   +I    +L  R       
Sbjct: 122 -LKEIPYGLL--GYPVLMSADILMAKAN----LVPVGRDNESHIEFARELARRFNHLYKN 174

Query: 219 ------PKLFALTSPLLTTASGTKMGKTLSGAIWLNKE 250
                   +F  + PL+      KM K+L  AI+LN +
Sbjct: 175 NFFPIPESVFTDSRPLVGICGKNKMSKSLDNAIFLNDD 212


>gi|198242791|ref|YP_002218378.1| tryptophanyl-tRNA synthetase II [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|205355234|ref|YP_002229035.1| tryptophanyl-tRNA synthetase II [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 287/91]
 gi|207859634|ref|YP_002246285.1| tryptophanyl-tRNA synthetase II [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
 gi|197937307|gb|ACH74640.1| tryptophanyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|205275015|emb|CAR40099.1| probable tryptophanyl-tRNA synthetase [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 287/91]
 gi|206711437|emb|CAR35821.1| probable tryptophanyl-tRNA synthetase [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
 gi|326626186|gb|EGE32531.1| tryptophanyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Dublin str. 3246]
 gi|326630396|gb|EGE36739.1| tryptophanyl-tRNA synthetase II [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 9]
          Length = 337

 Score = 44.8 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 35/217 (16%), Positives = 64/217 (29%), Gaps = 29/217 (13%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMR-SQEIQEN 102
            T  SLH GH    +      +  H+   L+     +       D      +    I + 
Sbjct: 13  PTG-SLHLGHYVGSLRQRVALQQDHQQYVLIADLQGL------TDNGSNPQKIRDNIPQV 65

Query: 103 IEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR 162
           +     +           T   + +    L  +  + +     +    N  +  E  +  
Sbjct: 66  LADYLAVG-----IDPTLTTICLQSALPALAELTVLYMNIVTVARVERNPTVKNEIAQKG 120

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT---- 218
             R   + F    Y I QA D       +   +   G DQ   I    ++  ++ +    
Sbjct: 121 FTRSLPVGF--MAYPISQAADITA----FKAEMVPVGDDQLPMIEQTNEIVHKMNSLFSS 174

Query: 219 ---PKLFALTSPL--LTTASG-TKMGKTLSGAIWLNK 249
                  AL S +  L    G  KM K+L   + L+ 
Sbjct: 175 PVLRPCQALLSDMGRLPGIDGSAKMSKSLGNTLLLSA 211


>gi|91786901|ref|YP_547853.1| tryptophanyl-tRNA synthetase [Polaromonas sp. JS666]
 gi|91696126|gb|ABE42955.1| tryptophanyl-tRNA synthetase [Polaromonas sp. JS666]
          Length = 449

 Score = 44.8 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 21/83 (25%), Positives = 30/83 (36%), Gaps = 13/83 (15%)

Query: 174 FNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSP------ 227
           F Y +L   D + + K +   +   G DQ  +I    D+ +R        L  P      
Sbjct: 151 FMYPVLMGADIL-MFKTHKVPV---GRDQIQHIEMARDMAQRFNHLYGEHLVLPEAVIEE 206

Query: 228 ---LLTTASGTKMGKTLSGAIWL 247
              LL    G KM K+    I L
Sbjct: 207 SVALLPGLDGRKMSKSYDNTIPL 229


>gi|41615178|ref|NP_963676.1| tyrosyl-tRNA synthetase [Nanoarchaeum equitans Kin4-M]
 gi|74579724|sp|Q74MD3|SYY_NANEQ RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA
           ligase; Short=TyrRS
 gi|40068902|gb|AAR39237.1| NEQ389 [Nanoarchaeum equitans Kin4-M]
          Length = 376

 Score = 44.8 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 39/222 (17%), Positives = 79/222 (35%), Gaps = 25/222 (11%)

Query: 11  ILSER-GFIHQISNPR-----ELDILCSQGV-VTAYIGYDLTASSLHAGH-LTQLMLLFW 62
            + ER   I Q           L     QG+ +  YIG++++   +H G  +  ++ +  
Sbjct: 2   DIEERINLIAQKPTEEILTIDRLKQYLEQGIDLNHYIGFEISG-FVHLGTGIISMLKVRD 60

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSS--FIKYGTGK 120
            QK   K    +    S I      D        + I++  +              G   
Sbjct: 61  FQKAKVKTTLFLADYHSWINKKLGGD-------LETIRKVAKGYFAEALKVSLKTVGGDP 113

Query: 121 TDALMLNNETWLCSIK--YIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMI 178
            +  ++        +   Y++ + +I    ++NR+    ++  R K+ +S+SF +  Y+ 
Sbjct: 114 DEVKVVLGSELYEKLGIEYLENIIKISMNTTLNRIKKGITIMGR-KQGESISFAQLLYVP 172

Query: 179 LQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
           +Q  D   L       L  GG DQ    +  I++ +      
Sbjct: 173 MQVADIYSLN----VNLAHGGIDQRKAHVIAIEVSDAFGYKP 210


>gi|281338622|gb|EFB14206.1| hypothetical protein PANDA_005823 [Ailuropoda melanoleuca]
          Length = 439

 Score = 44.8 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 39/248 (15%), Positives = 81/248 (32%), Gaps = 31/248 (12%)

Query: 15  RGFIHQISN-PRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +  + LD   ++     Y G   ++ ++H GHL   +   WLQ   + P+ +
Sbjct: 102 RGIFFSHRDVNQILDAYENKKPFYLYTGRGPSSEAMHVGHLIPFIFTKWLQDVFNVPLVI 161

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                         D+ + + +   + +            I  G       + ++  ++ 
Sbjct: 162 -----------QMTDDEKYLWKDLTLDQAYGYAVENAKDIIACGFDINKTFIFSDLDYMG 210

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA--------YDFV 185
                   + +     + + ++F  V+       S S  + ++  +QA            
Sbjct: 211 --MSPGFYKNV---VKIQKHVTFNQVKGIFGFTDSDSIGKISFPAIQAAPSFSNSFPQIF 265

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTASGTKMGKTLS 242
               +  C +     DQ        D+  R+  PK   L +   P L  A  TKM  +  
Sbjct: 266 RDRADIQCLIPC-AIDQDPYFRMTRDVAPRIGYPKPALLHSTFFPALQGAQ-TKMSASDP 323

Query: 243 G-AIWLNK 249
             +I+L  
Sbjct: 324 NSSIFLTD 331


>gi|298492205|ref|YP_003722382.1| hemolysin A ['Nostoc azollae' 0708]
 gi|298234123|gb|ADI65259.1| hemolysin A ['Nostoc azollae' 0708]
          Length = 270

 Score = 44.8 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 9/40 (22%), Positives = 23/40 (57%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL 393
           TL+V  G + S  +A+R +++  +++N  +I     ++ +
Sbjct: 8   TLLVDLGLSPSRQQAQRLIQAGEVRVNQQVIDKAGTEVDI 47


>gi|56708527|ref|YP_170423.1| tryptophanyl-tRNA synthetase [Francisella tularensis subsp.
           tularensis SCHU S4]
 gi|110670998|ref|YP_667555.1| tryptophanyl-tRNA synthetase [Francisella tularensis subsp.
           tularensis FSC198]
 gi|254371153|ref|ZP_04987155.1| tryptophanyl-tRNA synthetase [Francisella tularensis subsp.
           tularensis FSC033]
 gi|56605019|emb|CAG46121.1| Tryptophanyl-tRNA synthetase [Francisella tularensis subsp.
           tularensis SCHU S4]
 gi|110321331|emb|CAL09504.1| Tryptophanyl-tRNA synthetase [Francisella tularensis subsp.
           tularensis FSC198]
 gi|151569393|gb|EDN35047.1| tryptophanyl-tRNA synthetase [Francisella tularensis subsp.
           tularensis FSC033]
 gi|282159743|gb|ADA79134.1| tryptophanyl-tRNA synthetase [Francisella tularensis subsp.
           tularensis NE061598]
          Length = 334

 Score = 44.8 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 22/93 (23%), Positives = 36/93 (38%), Gaps = 16/93 (17%)

Query: 166 EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL--------GERLK 217
           ++ ++   FNY +L A D +     +D  L   G DQ  +I    D+         + + 
Sbjct: 128 DKGITMGLFNYPVLMAADILI----FDADLVPVGKDQIQHIEIARDIANRFNHIYQKPVL 183

Query: 218 TPKLFALTS---PLLTTASGTKMGKTLSGAIWL 247
                ALTS     +    G KM K+    I +
Sbjct: 184 KAPQ-ALTSEDSQTILGLDGRKMSKSYDNTIAI 215


>gi|313674772|ref|YP_004052768.1| tryptophanyl-tRNA synthetase [Marivirga tractuosa DSM 4126]
 gi|312941470|gb|ADR20660.1| tryptophanyl-tRNA synthetase [Marivirga tractuosa DSM 4126]
          Length = 322

 Score = 44.8 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 36/276 (13%), Positives = 79/276 (28%), Gaps = 44/276 (15%)

Query: 50  HAGHLTQLML--LFWLQKTGHKPISLMGGGTSIIGDPSFRDES-RRMMRSQEIQENIEKI 106
           H G+L   ++  +   Q   ++    +    S+    + +D   R+   +      +   
Sbjct: 15  HLGNLLGAIIPAIKLSQDPKNESFFFIADLHSLT---TIKDAEVRKDNVNAVAAAWLAFG 71

Query: 107 KGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE 166
                +     +       LN   W            +  +     + +  S + +  R 
Sbjct: 72  FDTDKNLFYRQSKVPQVTELN---WY-----------MSCYTPFPMLANAHSFKDKSDRL 117

Query: 167 QSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTS 226
             ++   F Y +L A D +     YD  +   G DQ  ++    D+              
Sbjct: 118 ADVNAGLFTYPVLMACDIIL----YDADIVPVGKDQKQHLEMTRDIASAFNHRYGDVFVL 173

Query: 227 P---------LLTTASGTKMGKTLSGAIWL--NKEMTSPYNFWQYWRNIDDAD------- 268
           P          +    G KM K+    I +    +            +    +       
Sbjct: 174 PEARIDEQIMTIPGTDGQKMSKSYGNTIDIFQTDKKLRKNVMQIITDSTPMEEPKNPDKC 233

Query: 269 -VVSFAKRL-TTLPMSEIDRMAKLQGKEINEAKKII 302
            V +  K L +   ++E+ R  +        AK+ +
Sbjct: 234 NVFNIYKLLASDEQIAEMRRNYEGGNYGYGHAKQAL 269


>gi|289177840|gb|ADC85086.1| Tryptophanyl-tRNA synthetase [Bifidobacterium animalis subsp.
           lactis BB-12]
          Length = 380

 Score = 44.8 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 51/366 (13%), Positives = 109/366 (29%), Gaps = 66/366 (18%)

Query: 22  SNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSI 80
           S+     +  + G  T   G   T   LH GH    +     +Q  G     ++      
Sbjct: 40  SDETLAKLKANPGKFTMLTGDRPTGR-LHLGHFFGSIRERVAMQNLGVNTNIIIADY--- 95

Query: 81  IGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY----GTGKTDALMLNNETWLCSIK 136
                      +++  ++  E+I+    + +  + Y       +   +  ++     +  
Sbjct: 96  -----------QVITDRDTTEHID--DNVLNLVLDYMAAGIDPEKTMIFTHSAVPAENQL 142

Query: 137 YIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDFVELAKNYDCRL 195
            +  L  +             +V+S ++    +L+ L   Y + QA D   L    +   
Sbjct: 143 MLPFLSLVTEAELHRNP----TVKSEMESSGHALTGLLLTYPVHQACD--ILFCKANVV- 195

Query: 196 QMGGSDQWGNIICGIDLGERLKT----------PKLFALT-SPLLTTASGTKMGKTLSGA 244
              G D   ++     +  R                  L+ +P +    G KM K+   +
Sbjct: 196 -PIGKDNLPHVEITRTIARRFNERYAKKNPVFPEPAAILSEAPEIPGLDGRKMSKSYGNS 254

Query: 245 IWLNKEMTSPYNFWQYWRNIDDAD------------VVSFAK---RLTTLPMSEIDRMAK 289
           I L           +   +  D++            V +       +T    SEI   A+
Sbjct: 255 IMLGATAEETAKLIKK--SPTDSERTITFDPVNRPQVSALLTTAGLVTGRDPSEIA--AE 310

Query: 290 LQGKEINEAKKIIATEITTMV--HGREEAEKAAT---AAMECFDMSIHSQHMPTISISKD 344
           +        KK +   +   +  H    AE A           D +  +  +   ++ + 
Sbjct: 311 IGNAGAGALKKYVIDSVNEFLAPHRERRAELAKDMDSVRDILHDGNARANAIANQTLDEV 370

Query: 345 EVSRGM 350
             + GM
Sbjct: 371 REAMGM 376


>gi|332252583|ref|XP_003275432.1| PREDICTED: tryptophanyl-tRNA synthetase, cytoplasmic-like isoform 5
           [Nomascus leucogenys]
          Length = 488

 Score = 44.8 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 38/248 (15%), Positives = 81/248 (32%), Gaps = 31/248 (12%)

Query: 15  RGFIHQISN-PRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +  + LD   ++     Y G   ++ ++H GHL   +   WLQ   + P+ +
Sbjct: 151 RGIFFSHRDMNQVLDAYENKKPFYLYTGRGPSSEAMHVGHLIPFIFTKWLQDVFNVPLVI 210

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                         D+ + + +   + +            I  G       + ++  ++ 
Sbjct: 211 -----------QMTDDEKYLWKDLTLDQAYSYAVENAKDIIACGFDINKTFIFSDLDYMG 259

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA--------YDFV 185
                   + +     + + ++F  V+       S    + ++  +QA            
Sbjct: 260 --MSSGFYKNV---VKIQKHVTFNQVKGIFGFTDSDCIGKISFPAIQAAPSFSNSFPQIF 314

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTASGTKMGKTLS 242
           +   +  C +     DQ        D+  R+  PK   L +   P L  A  TKM  +  
Sbjct: 315 QDRTDIQCLIPC-AIDQDPYFRMTRDVAPRIGYPKPALLHSTFFPALQGAQ-TKMSASDP 372

Query: 243 G-AIWLNK 249
             +I+L  
Sbjct: 373 NSSIFLTD 380


>gi|332531467|ref|ZP_08407371.1| tryptophanyl-tRNA synthetase [Hylemonella gracilis ATCC 19624]
 gi|332039136|gb|EGI75558.1| tryptophanyl-tRNA synthetase [Hylemonella gracilis ATCC 19624]
          Length = 431

 Score = 44.8 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 34/216 (15%), Positives = 64/216 (29%), Gaps = 34/216 (15%)

Query: 50  HAGHLTQLM--LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIK 107
           H G+    +   +   +  G +    +    ++I   +  D +R    + EI        
Sbjct: 19  HLGNYVGAIRPTVIASRTAGMEGYYFLADYHALIK--TGGDPARVQRSTLEIAATW---- 72

Query: 108 GIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV--RSRL-- 163
                 I  G                  +    L  +     +NR  ++++   ++R   
Sbjct: 73  ------IAAGLDPERVTFYRQSDIPEIPELTWFLTCVCGKGLLNRAHAYKAAVDKNRAAG 126

Query: 164 ---KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT-- 218
                +  +S   F Y +L A D +    +   R+ +G  DQ  +I    D+        
Sbjct: 127 LTEDEDAGVSAGLFMYPVLMAADILMFNAH---RVPVG-RDQIQHIEMARDIAASFNHLY 182

Query: 219 -------PKLFALTSPLLTTASGTKMGKTLSGAIWL 247
                        T   L    G KM K+    I L
Sbjct: 183 GEHFTLPEAQIEETVATLPGLDGRKMSKSYDNTIPL 218


>gi|322830198|gb|EFZ33303.1| tyrosyl-tRNA synthetase, putative [Trypanosoma cruzi]
          Length = 690

 Score = 44.8 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 36/228 (15%), Positives = 83/228 (36%), Gaps = 22/228 (9%)

Query: 19  HQISNPRELDILCSQGV-VTAYIGYDLTASSLHA--GHLTQLMLLFWLQKTGHKPISLMG 75
            +     EL  L ++   +  Y G++ +   +H   G    + +     ++G + +  + 
Sbjct: 23  EECIQEEELLNLITKKPNIRCYDGFEPSGR-MHIAQGVFKAVNVNK-CTQSGCEFVFWVA 80

Query: 76  GGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSI 135
              +++ D    +  +  +  Q + E  +         I +     +     N  W   +
Sbjct: 81  DWFALMNDKMCGELEKIRIVGQYLIEVWKAAGMNMEKVI-FLWSSDEITRNANSYWKTVL 139

Query: 136 KYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRL 195
                  +IG   ++ R+   +      K+E +L+  +  Y ++Q  D   L  +  C+L
Sbjct: 140 -------DIGRRNTIARI--KKCCTIMGKQEGTLTAAQILYPLMQCADIFFLKADI-CQL 189

Query: 196 QMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLLTT-ASGT-KMGKT 240
              G DQ    +   +  + +    K   L+  +L+    G  KM K+
Sbjct: 190 ---GLDQRKVNMLAREYCDLIGRKLKPVILSHHMLSGLKEGQPKMSKS 234


>gi|317149984|ref|XP_001823709.2| tyrosyl-tRNA synthetase, cytoplasmic [Aspergillus oryzae RIB40]
          Length = 381

 Score = 44.8 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 40/233 (17%), Positives = 80/233 (34%), Gaps = 22/233 (9%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L        ++     +IL  +     Y G   T    H G+    + +  L +     +
Sbjct: 11  LISENLAEILNPEIIENILIEKRNPRIYWGTATTGRP-HIGYFLAALKIAQLLRAQCDVV 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA--LMLNNE 129
            L+    + +      D  +  +  + ++   +  + I ++ ++     TD    +L + 
Sbjct: 70  VLLADVHAFL------DNLKAPL--ELVENRAQYYRKIITAILESVGVPTDKLEFVLGSS 121

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSF--ESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
                   +D+ R + S  S         E V+        LS L   Y +LQ  D   L
Sbjct: 122 YQKSPEYVMDVYR-LSSLISEGDAKKAGAEVVKQ--TENAPLSGL--LYPVLQVLDEEHL 176

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
                  +Q+GG DQ        +   ++   K   L +P+++   G KM  +
Sbjct: 177 K----VDVQLGGMDQRKLFTAATEWLPKIGYRKRAHLINPMISGLKGAKMSSS 225


>gi|306835373|ref|ZP_07468394.1| tryptophan--tRNA ligase [Corynebacterium accolens ATCC 49726]
 gi|304568739|gb|EFM44283.1| tryptophan--tRNA ligase [Corynebacterium accolens ATCC 49726]
          Length = 343

 Score = 44.8 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 35/228 (15%), Positives = 71/228 (31%), Gaps = 35/228 (15%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   TA S H G+    +  +   + G+     +    +I                +E++
Sbjct: 16  GIQPTADSYHLGNYLGALKQWIDLQEGYDAFYFIPDLHAIT----------VEQNPEELR 65

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLS-FESV 159
                      +       K+   + ++      + +  + + +  F   +RM    +  
Sbjct: 66  NRTMAGAAQLIALG-IEPEKSTLFVQSHVPAHAELTW--VFQCLTGFGEASRMTQFKDKS 122

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R     S+    F Y IL A D +  + +Y   + +G  DQ  ++    +L ER    
Sbjct: 123 AKRGADRTSVGL--FTYPILMAADILLYSPDY---VPVG-EDQRQHLELTRNLAERFNNK 176

Query: 220 KLFALTSPLLT--TASGT-----------KMGKTLSGAIWLNKEMTSP 254
             +  T  +       G            KM K+      L   + +P
Sbjct: 177 --YGETFHVPEPFIPEGAAKIYDLQDPTSKMSKSGPNPKGLVNLLDAP 222


>gi|254282767|ref|ZP_04957735.1| tryptophanyl-tRNA synthetase [gamma proteobacterium NOR51-B]
 gi|219678970|gb|EED35319.1| tryptophanyl-tRNA synthetase [gamma proteobacterium NOR51-B]
          Length = 335

 Score = 44.8 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 41/201 (20%), Positives = 60/201 (29%), Gaps = 40/201 (19%)

Query: 168 SLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSP 227
            +    F+Y IL A D +        R+ +G  DQ  ++    D+ +R         T P
Sbjct: 129 GIKMGLFSYPILMAADILIFNAE---RVPVG-RDQIQHVEMARDIAQRFNHHYEPLFTLP 184

Query: 228 ---------LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNI-------------- 264
                    +L    G KM K+ +  I L +         Q   N               
Sbjct: 185 EAVVDDNVAVLQGLDGRKMSKSYNNTIPLFEG----EKKLQKSINKIKTNLLEPGEPKDP 240

Query: 265 DDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAM 324
           DD+ V             E  R     G    EAKK++   I       EE   A     
Sbjct: 241 DDSIVFQIWSAFADNEQRESMRQDFADGIAWGEAKKLLFKRIN------EELAPARERYQ 294

Query: 325 ECFDMSIHSQHMPTISISKDE 345
              D   H   +  I ++  E
Sbjct: 295 YLMD---HPGELEDIMVAGAE 312


>gi|304311674|ref|YP_003811272.1| Tryptophanyl-tRNA synthetase, class Ib [gamma proteobacterium HdN1]
 gi|301797407|emb|CBL45627.1| Tryptophanyl-tRNA synthetase, class Ib [gamma proteobacterium HdN1]
          Length = 339

 Score = 44.8 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 21/91 (23%), Positives = 38/91 (41%), Gaps = 13/91 (14%)

Query: 166 EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK--TPKLFA 223
           ++ ++   F+Y IL + D +    +   ++ +G  DQ  +I    D+G+R      + F 
Sbjct: 128 DKGITMGLFSYPILMSADILMFNAH---KIPVG-RDQIQHIEMARDIGQRFNYLFGEQFV 183

Query: 224 L-------TSPLLTTASGTKMGKTLSGAIWL 247
           L          +L    G KM K+    I L
Sbjct: 184 LPEAAVDDQVAVLAGLDGRKMSKSYGNTIPL 214


>gi|327293942|ref|XP_003231667.1| tryptophanyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
 gi|326466295|gb|EGD91748.1| tryptophanyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
          Length = 437

 Score = 44.8 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 16/61 (26%), Positives = 23/61 (37%), Gaps = 1/61 (1%)

Query: 15  RGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +  + LD          Y G   ++ +LH GH   L    WLQ     P+ +
Sbjct: 80  RGLFFSHRDFDKILDKYEYGEPFFLYTGRGPSSDALHLGHTIPLTFTKWLQDVFDVPLVI 139

Query: 74  M 74
           M
Sbjct: 140 M 140


>gi|269861355|ref|XP_002650388.1| tryptophanyl-tRNA synthetase [Enterocytozoon bieneusi H348]
 gi|220066174|gb|EED43670.1| tryptophanyl-tRNA synthetase [Enterocytozoon bieneusi H348]
          Length = 388

 Score = 44.8 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 39/219 (17%), Positives = 72/219 (32%), Gaps = 23/219 (10%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSF 86
           L+++ ++     Y G   ++SS+H GH    +L  +LQ   + P+ +             
Sbjct: 72  LEVIKTKKPFYIYTGRGPSSSSMHLGHTIPFLLCKYLQDVFNCPLVI-----------QI 120

Query: 87  RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGS 146
            D+ + + +   + + I+         I  G       + +N     S+   + LR I  
Sbjct: 121 TDDEKFIFKDMSLDDAIKYGIENIKDIIALGFNPKLTYIFSNYN-SSSLFEYNTLR-ISK 178

Query: 147 FFSVNRMLSFESVRSRLKREQSL---SFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQW 203
             ++N  L        L     +      E       ++ F  L K+    +     DQ 
Sbjct: 179 AINLNEALK--IFGFNLTSNIGMIQFPAKEIAPAFPTSFPF--LDKDAFVLIPS-AVDQD 233

Query: 204 GNIICGIDLGERLKTPKLFALTSPLLTTASG--TKMGKT 240
                  D    L   K   L   LL +  G   KM  +
Sbjct: 234 PFFRLARDKANSLNEKKPTTLYVDLLPSLKGIDKKMSAS 272


>gi|134301829|ref|YP_001121797.1| tryptophanyl-tRNA synthetase [Francisella tularensis subsp.
           tularensis WY96-3418]
 gi|134049606|gb|ABO46677.1| tryptophanyl-tRNA synthetase [Francisella tularensis subsp.
           tularensis WY96-3418]
          Length = 334

 Score = 44.8 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 22/93 (23%), Positives = 36/93 (38%), Gaps = 16/93 (17%)

Query: 166 EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL--------GERLK 217
           ++ ++   FNY +L A D +     +D  L   G DQ  +I    D+         + + 
Sbjct: 128 DKGITMGLFNYPVLMAADILI----FDADLVPVGKDQIQHIEIARDIANRFNHIYQKPVL 183

Query: 218 TPKLFALTS---PLLTTASGTKMGKTLSGAIWL 247
                ALTS     +    G KM K+    I +
Sbjct: 184 KAPQ-ALTSEDSQTILGLDGRKMSKSYDNTIAI 215


>gi|330823713|ref|YP_004387016.1| tryptophanyl-tRNA synthetase [Alicycliphilus denitrificans K601]
 gi|329309085|gb|AEB83500.1| tryptophanyl-tRNA synthetase [Alicycliphilus denitrificans K601]
          Length = 434

 Score = 44.8 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 20/93 (21%), Positives = 31/93 (33%), Gaps = 13/93 (13%)

Query: 164 KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFA 223
           + +  ++   F Y +L A D + L   +   +   G DQ  +I    D+           
Sbjct: 125 ESDDGVTAGLFMYPVLMAADIL-LFNAHRVPV---GRDQIQHIEMARDMAASFNHLYGEH 180

Query: 224 LTSP---------LLTTASGTKMGKTLSGAIWL 247
            T P          L    G KM K+    I L
Sbjct: 181 FTLPEAAIEDNVATLLGLDGRKMSKSYDNTIPL 213


>gi|315604619|ref|ZP_07879682.1| tryptophan--tRNA ligase [Actinomyces sp. oral taxon 180 str. F0310]
 gi|315313631|gb|EFU61685.1| tryptophan--tRNA ligase [Actinomyces sp. oral taxon 180 str. F0310]
          Length = 366

 Score = 44.8 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 54/300 (18%), Positives = 88/300 (29%), Gaps = 45/300 (15%)

Query: 26  ELDILCSQGVVTAYI--GYDLTASSLHAGHLTQ-LMLLFWLQKTGHKPISLMGGGTSIIG 82
           E+D+   Q      I  G   T   LH GH    L     LQ  G     L+     +I 
Sbjct: 26  EIDLAIDQDPSRFRILTGDRPTG-HLHLGHYFGTLRNRVLLQDRGVDTWVLVADY-QVIT 83

Query: 83  DPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLR 142
           D       R  +           I    S+        +    LN          +  L 
Sbjct: 84  DRDGVGPIRERVLGLVADYLAAGIDPKRSTIF----NHSAVPALN-------QLMLPFLS 132

Query: 143 EIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQ 202
            +              + +     ++++ L   Y + QA D +    N    +   G DQ
Sbjct: 133 LVTESELHRNPTVKAELEA--TEGRAMTGLMLTYPVHQAADILFCKAN----IVPVGQDQ 186

Query: 203 WGNIICGIDLGERLKT--------------PKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
             ++     + +R                 P+      PLL    G KM K+    I L 
Sbjct: 187 LPHLEQARLIAQRFDKRYGRATPERPVFPRPEALLSEVPLLLGTDGQKMSKSRGNTIELR 246

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLP--MSEIDRMAKLQGKEINEAKKIIATEI 306
                     +  +   DA+     +R+T  P    E+  +  L      +A ++IA  I
Sbjct: 247 MSADETAKILKKAK--TDAE-----RRITFDPEGRPEVSNLLMLASLATGDAPEVIADRI 299


>gi|319764023|ref|YP_004127960.1| tryptophanyl-tRNA synthetase [Alicycliphilus denitrificans BC]
 gi|317118584|gb|ADV01073.1| tryptophanyl-tRNA synthetase [Alicycliphilus denitrificans BC]
          Length = 433

 Score = 44.8 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 20/93 (21%), Positives = 31/93 (33%), Gaps = 13/93 (13%)

Query: 164 KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFA 223
           + +  ++   F Y +L A D + L   +   +   G DQ  +I    D+           
Sbjct: 125 ESDDGVTAGLFMYPVLMAADIL-LFNAHRVPV---GRDQIQHIEMARDMAASFNHLYGEH 180

Query: 224 LTSP---------LLTTASGTKMGKTLSGAIWL 247
            T P          L    G KM K+    I L
Sbjct: 181 FTLPEAAIEDNVATLLGLDGRKMSKSYDNTIPL 213


>gi|269864125|ref|XP_002651463.1| tryptophanyl-tRNA synthetase [Enterocytozoon bieneusi H348]
 gi|220064477|gb|EED42593.1| tryptophanyl-tRNA synthetase [Enterocytozoon bieneusi H348]
          Length = 378

 Score = 44.8 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 39/219 (17%), Positives = 72/219 (32%), Gaps = 23/219 (10%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSF 86
           L+++ ++     Y G   ++SS+H GH    +L  +LQ   + P+ +             
Sbjct: 72  LEVIKTKKPFYIYTGRGPSSSSMHLGHTIPFLLCKYLQDVFNCPLVI-----------QI 120

Query: 87  RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGS 146
            D+ + + +   + + I+         I  G       + +N     S+   + LR I  
Sbjct: 121 TDDEKFIFKDMSLDDAIKYGIENIKDIIALGFNPKLTYIFSNYN-SSSLFEYNTLR-ISK 178

Query: 147 FFSVNRMLSFESVRSRLKREQSL---SFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQW 203
             ++N  L        L     +      E       ++ F  L K+    +     DQ 
Sbjct: 179 AINLNEALK--IFGFNLTSNIGMIQFPAKEIAPAFPTSFPF--LDKDAFVLIPS-AVDQD 233

Query: 204 GNIICGIDLGERLKTPKLFALTSPLLTTASG--TKMGKT 240
                  D    L   K   L   LL +  G   KM  +
Sbjct: 234 PFFRLARDKANSLNEKKPTTLYVDLLPSLKGIDKKMSAS 272


>gi|195941745|ref|ZP_03087127.1| tryptophanyl-tRNA synthetase [Borrelia burgdorferi 80a]
 gi|216264531|ref|ZP_03436523.1| tryptophanyl-tRNA synthetase [Borrelia burgdorferi 156a]
 gi|218249523|ref|YP_002374539.1| tryptophanyl-tRNA synthetase [Borrelia burgdorferi ZS7]
 gi|221217479|ref|ZP_03588950.1| tryptophanyl-tRNA synthetase [Borrelia burgdorferi 72a]
 gi|223889097|ref|ZP_03623686.1| tryptophanyl-tRNA synthetase [Borrelia burgdorferi 64b]
 gi|224533926|ref|ZP_03674511.1| tryptophanyl-tRNA synthetase [Borrelia burgdorferi CA-11.2a]
 gi|225549727|ref|ZP_03770692.1| tryptophanyl-tRNA synthetase [Borrelia burgdorferi 118a]
 gi|226322080|ref|ZP_03797605.1| tryptophanyl-tRNA synthetase [Borrelia burgdorferi Bol26]
 gi|215981004|gb|EEC21811.1| tryptophanyl-tRNA synthetase [Borrelia burgdorferi 156a]
 gi|218164711|gb|ACK74772.1| tryptophanyl-tRNA synthetase [Borrelia burgdorferi ZS7]
 gi|221192757|gb|EEE18973.1| tryptophanyl-tRNA synthetase [Borrelia burgdorferi 72a]
 gi|223885346|gb|EEF56447.1| tryptophanyl-tRNA synthetase [Borrelia burgdorferi 64b]
 gi|224512929|gb|EEF83295.1| tryptophanyl-tRNA synthetase [Borrelia burgdorferi CA-11.2a]
 gi|225369687|gb|EEG99135.1| tryptophanyl-tRNA synthetase [Borrelia burgdorferi 118a]
 gi|226232670|gb|EEH31424.1| tryptophanyl-tRNA synthetase [Borrelia burgdorferi Bol26]
 gi|312148318|gb|ADQ30977.1| tryptophanyl-tRNA synthetase [Borrelia burgdorferi JD1]
          Length = 351

 Score = 44.8 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 31/218 (14%), Positives = 68/218 (31%), Gaps = 28/218 (12%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRD-ESRRMMRSQEIQEN 102
            T + LH GH    ++     +  ++   ++    ++   P  +   +      + + + 
Sbjct: 12  PTGA-LHLGHYVGSVVNRLKFQEEYETYFIIADLHTLTTKPDLKSINTIPSNVREMVLDY 70

Query: 103 IEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR 162
           +          I   +   +   L+            ++  +     +  +         
Sbjct: 71  LACGINPDKVSIYLQSAIPELFELH--------LIFSMIVTVARLQRIPSIKDMSIAAG- 121

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT---- 218
             +E     L   Y +L + D +    N    L   G D   +I    +L  R       
Sbjct: 122 -LKEIPYGLL--GYPVLMSADILMTKAN----LVPVGRDNESHIEFARELARRFNHLYKN 174

Query: 219 ------PKLFALTSPLLTTASGTKMGKTLSGAIWLNKE 250
                   +F  + PL+      KM K+L+ AI+LN +
Sbjct: 175 NFFPIPESVFTDSRPLVGIYGKNKMSKSLNNAIFLNDD 212


>gi|288556774|ref|YP_003428709.1| tryptophanyl-tRNA synthetase [Bacillus pseudofirmus OF4]
 gi|288547934|gb|ADC51817.1| tryptophanyl-tRNA synthetase [Bacillus pseudofirmus OF4]
          Length = 332

 Score = 44.8 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 33/219 (15%), Positives = 70/219 (31%), Gaps = 30/219 (13%)

Query: 34  GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRM 93
              T   G   T   LH G+    M      +  ++    +    ++   P  + E  + 
Sbjct: 3   QKQTLVSGIRPTGD-LHLGNYIGAMKDIHRLQKEYEAYFFIVDLHALTTHP--KPELIKP 59

Query: 94  MRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRM 153
                ++  +             G     A +    +    I  + L   +     +  +
Sbjct: 60  RTRDAVRSYLGA-----------GLDPNQATIYAQSSLAAEISELHL--YLSMVMHIGEL 106

Query: 154 LSFESVRSRLKRE-QSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL 212
           L   + + + K+    +S+    Y +L A D + +   +   +   G+DQ  +I    D+
Sbjct: 107 LRCPTFKEKAKQHADHVSYGLVGYPVLMAAD-MFIHGAHKVPV---GADQLVHIEIARDI 162

Query: 213 GERLKTPKLFALTSP--------LLTTASGT-KMGKTLS 242
             +  +     LT P         + +  G  KM K+L 
Sbjct: 163 ARKFNSMYGEILTLPNGMVEKEARVPSLGGKGKMSKSLG 201


>gi|288803207|ref|ZP_06408641.1| ribosomal large subunit pseudouridine synthase B [Prevotella
           melaninogenica D18]
 gi|288334248|gb|EFC72689.1| ribosomal large subunit pseudouridine synthase B [Prevotella
           melaninogenica D18]
          Length = 514

 Score = 44.8 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 13/74 (17%), Positives = 30/74 (40%), Gaps = 1/74 (1%)

Query: 342 SKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
              + +  + L   +  AG   S  EA   + S A+ +N  ++     ++   D     +
Sbjct: 271 ENFDPNEPIRLNKYLANAGVC-SRREADEFILSGAVTVNGEVVKELGSKVLRTDEVYFQD 329

Query: 402 IKLSFGKKNHIICH 415
             +S  KK +++ +
Sbjct: 330 KLVSLEKKVYVLLN 343


>gi|269956101|ref|YP_003325890.1| RNA-binding S4 domain-containing protein [Xylanimonas
           cellulosilytica DSM 15894]
 gi|269304782|gb|ACZ30332.1| RNA-binding S4 domain protein [Xylanimonas cellulosilytica DSM
           15894]
          Length = 77

 Score = 44.8 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 14/64 (21%), Positives = 27/64 (42%), Gaps = 1/64 (1%)

Query: 336 MPTISISKDEV-SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
           MP+++     +    + L   +  AG A S NEAR  +    + +N  + +    Q+   
Sbjct: 1   MPSMTPEAVPIRDDMIRLGQFLKLAGLADSGNEARDLIADGEVSVNGEVETRRGRQLGRG 60

Query: 395 DFDS 398
           D  +
Sbjct: 61  DVVA 64


>gi|270295727|ref|ZP_06201927.1| ribosomal large subunit pseudouridine synthase B [Bacteroides sp.
           D20]
 gi|317479868|ref|ZP_07938986.1| S4 domain-containing protein [Bacteroides sp. 4_1_36]
 gi|270273131|gb|EFA18993.1| ribosomal large subunit pseudouridine synthase B [Bacteroides sp.
           D20]
 gi|316903977|gb|EFV25813.1| S4 domain-containing protein [Bacteroides sp. 4_1_36]
          Length = 494

 Score = 44.8 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 12/71 (16%), Positives = 31/71 (43%), Gaps = 1/71 (1%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           + +  + L   +  AG   S  EA   + +  + +N  +++    +IK  D     +  +
Sbjct: 254 DPNEPIRLNKFLANAGVC-SRREADEFITAGVVSVNGEVVTELGTKIKRGDEVKFHDQTV 312

Query: 405 SFGKKNHIICH 415
           S  +K +++ +
Sbjct: 313 SIERKIYVLLN 323


>gi|222086166|ref|YP_002544698.1| tryptophanyl-tRNA synthetase protein [Agrobacterium radiobacter
           K84]
 gi|221723614|gb|ACM26770.1| tryptophanyl-tRNA synthetase protein [Agrobacterium radiobacter
           K84]
          Length = 339

 Score = 44.8 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 42/241 (17%), Positives = 70/241 (29%), Gaps = 39/241 (16%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
            T   LH GH    +      +  H+   L+    ++  +    D  RR      + E  
Sbjct: 17  PTGP-LHLGHYAGSLRNRVALQHSHRQYLLLADTQALTDNADDPDRVRR-----NVLEVA 70

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRM----LSFESV 159
                +          +T   + +    L  +  +       +F +V R+         +
Sbjct: 71  FDYLAVG-----IDPAETTICLQSALPALAELTLL-----YLNFVTVGRLERNPTIKTEI 120

Query: 160 RSR-LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQ-----WGNIICGIDLG 213
           + R  +R+    FL   Y + QA D       +   +   G DQ       N I    L 
Sbjct: 121 QLRGFERDIPAGFL--CYPVSQAADITA----FKATIVPVGEDQAPLIEQTNEIVRR-LN 173

Query: 214 ERLKTPKLFAL--TSPL---LTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDA 267
            ++    LF      P    L    G  KM K+   AI L+                 D 
Sbjct: 174 RQVGREILFEAEAMIPAVGRLPGVDGKAKMSKSQGNAIPLSASPDDIREAVLRMYTDPDH 233

Query: 268 D 268
            
Sbjct: 234 L 234


>gi|18313815|ref|NP_560482.1| tryptophanyl-tRNA synthetase [Pyrobaculum aerophilum str. IM2]
 gi|20178127|sp|Q8ZTU5|SYW_PYRAE RecName: Full=Tryptophanyl-tRNA synthetase; AltName:
           Full=Tryptophan--tRNA ligase; Short=TrpRS
 gi|18161377|gb|AAL64664.1| tryptophanyl-tRNA synthetase [Pyrobaculum aerophilum str. IM2]
          Length = 375

 Score = 44.8 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 18/81 (22%), Positives = 29/81 (35%), Gaps = 3/81 (3%)

Query: 12  LSERGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWL-QKTGHK 69
           L  RGF +   +   +     +G     Y G   +   +H GH+   +LL W   K G +
Sbjct: 48  LIRRGFFYAHRDFDFIMKWHGEGRPWALYTGRGPSGP-VHIGHMVPWILLKWFSDKFGLE 106

Query: 70  PISLMGGGTSIIGDPSFRDES 90
               +        DP  + E 
Sbjct: 107 VYFQITDDEKFYDDPEMKLEE 127


>gi|288937374|ref|YP_003441433.1| tryptophanyl-tRNA synthetase [Klebsiella variicola At-22]
 gi|288892083|gb|ADC60401.1| tryptophanyl-tRNA synthetase [Klebsiella variicola At-22]
          Length = 335

 Score = 44.8 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 37/227 (16%), Positives = 64/227 (28%), Gaps = 27/227 (11%)

Query: 33  QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRR 92
               T   G   T   LH GH    +      +  H+   L+     +       D    
Sbjct: 2   NHPQTILTGDRPTGQ-LHLGHYVGSLRQRVALQHDHQQFILIADLQGL------TDNGSN 54

Query: 93  MMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNR 152
               +     +E +    +  I      T   + +    L  +  + +     +    N 
Sbjct: 55  PQ--KISHHILEVMADYLAVGID--PRLTTICLQSALPALAELSALYMNIVTVARVERNP 110

Query: 153 MLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL 212
            +  E  +    R   + FL   Y I QA D       +   L   G DQ   I    ++
Sbjct: 111 TVKNEIAQKGFARSLPVGFL--AYPISQAADITA----FKAELVPVGDDQLPMIEQTNEI 164

Query: 213 GERLK---TPKLFALTSPL------LTTASGT-KMGKTLSGAIWLNK 249
             ++       +      L      L    G  KM K+L   + L+ 
Sbjct: 165 VHKMNSLTGEPVLRHCKALLSEVSRLPGVDGNAKMSKSLGNTLTLSA 211


>gi|189501390|ref|YP_001960860.1| tryptophanyl-tRNA synthetase [Chlorobium phaeobacteroides BS1]
 gi|189496831|gb|ACE05379.1| tryptophanyl-tRNA synthetase [Chlorobium phaeobacteroides BS1]
          Length = 340

 Score = 44.8 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 35/171 (20%), Positives = 58/171 (33%), Gaps = 37/171 (21%)

Query: 167 QSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK---TPKLFA 223
            ++S+    Y +LQA D + L K     +   G DQ  ++    ++  R        +F 
Sbjct: 128 DAVSYGHLGYPVLQAADIL-LYKGNIVPV---GEDQLPHVEITREIARRFNNQYQHPVFG 183

Query: 224 LTS----PLLTTA------SG-TKMGKTLSGAIWLNKEMTSPYNFWQYWRN-IDDAD--- 268
                  P +T         G TKM K+L   I L+     P   +   R  + D     
Sbjct: 184 DVFEEPEPKITKFSRLAGLDGKTKMSKSLGNTILLS---DKPEEVFNKLRKAVTDTQKIR 240

Query: 269 -----------VVSFAKRLTTL-PMSEIDRMAKLQGKEINEAKKIIATEIT 307
                      V S+ +R +    +  I R  +       + KK  A  I+
Sbjct: 241 KNDPGRPEVCTVFSYHRRFSDPDSVESIARDCRSGALGCVDCKKACAEAIS 291


>gi|256393774|ref|YP_003115338.1| tryptophanyl-tRNA synthetase [Catenulispora acidiphila DSM 44928]
 gi|256360000|gb|ACU73497.1| tryptophanyl-tRNA synthetase [Catenulispora acidiphila DSM 44928]
          Length = 354

 Score = 44.8 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 46/260 (17%), Positives = 68/260 (26%), Gaps = 36/260 (13%)

Query: 24  PRELDILC--SQGVVTAYIGYDLTASSLHAGHLTQ-LMLLFWLQKTGHKPISLMGGGTSI 80
             EL          +    G   T   LH GH    L     LQ  G     L+     I
Sbjct: 18  EAELTAQLVGDARQIRVLTGDRPTGP-LHLGHYLGSLRNRVRLQDAGADMFVLVADYQVI 76

Query: 81  IGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDL 140
                    + R   S      +  +    +  +        A                L
Sbjct: 77  ---------TDRDASSSIADFALGLVADYLAVGLDPARSTVFAH-------SAVPAVNQL 120

Query: 141 LREIGSFFSVNRMLSFESVRSRLKREQS---LSFLEFNYMILQAYDFVELAKNYDCRLQM 197
           L  + S  SV   L                 LS L   Y + QA D +    +    L  
Sbjct: 121 LLPLMSLISVPE-LERNPTTKAEAAASGRPALSALMLTYPVHQAADILFCRSD----LVP 175

Query: 198 GGSDQWGNIICGIDLGERLKTPKLFALT--------SPLLTTASGTKMGKTLSGAIWLNK 249
            G DQ  ++     +  R  T      T        +P +  + G KM K+ S  I L  
Sbjct: 176 VGKDQLPHLEVARTVARRFNTRYAPVFTEPRALISDAPSVLGSDGHKMSKSHSNTIPLQA 235

Query: 250 EMTSPYNFWQYWRNIDDADV 269
                    + ++   D  +
Sbjct: 236 TADQTAALIKGFKTDTDRHI 255


>gi|300024100|ref|YP_003756711.1| RNA-binding S4 domain protein [Hyphomicrobium denitrificans ATCC
           51888]
 gi|299525921|gb|ADJ24390.1| RNA-binding S4 domain protein [Hyphomicrobium denitrificans ATCC
           51888]
          Length = 302

 Score = 44.8 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 17/82 (20%), Positives = 31/82 (37%), Gaps = 3/82 (3%)

Query: 316 AEKAATAAMECFDMSIHSQHM--PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLK 373
           A +A       F   I S  M  P  S + +     M +   + +AG   S  EA R + 
Sbjct: 2   ASRAGRCHKLAFFAHIESIEMAKPITSNTAETRDGPMRIAKAMARAGLC-SRREAERWIA 60

Query: 374 SNAIKINNSIISNEKLQIKLQD 395
              + +N  ++     ++  +D
Sbjct: 61  DGRVSVNGKLLKTPACEVGPKD 82


>gi|229588379|ref|YP_002870498.1| tryptophanyl-tRNA synthetase [Pseudomonas fluorescens SBW25]
 gi|229360245|emb|CAY47102.1| putative tryptophanyl-tRNA synthetase [Pseudomonas fluorescens
           SBW25]
          Length = 451

 Score = 44.8 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 36/219 (16%), Positives = 60/219 (27%), Gaps = 34/219 (15%)

Query: 166 EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL----KTPKL 221
           +  ++   ++Y +L A D + +   +   +   G DQ  ++    D+G+R        K 
Sbjct: 128 DAGITMGLYSYPVLMAADIL-MFNAHKVPV---GRDQIQHVEMARDIGQRFNHLFGNGKE 183

Query: 222 FALTSP---------LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNID------- 265
           F  T P          L    G KM K+    I L        +                
Sbjct: 184 F-FTMPEALIEESVATLPGLDGRKMSKSYDNTIPLFTSAKDMKDAISRIVTDSRAPGEAK 242

Query: 266 DADVVSFAKR---LTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATA 322
           D D            +    E  R   LQG    EAK  +   +           +A   
Sbjct: 243 DPDNSHLFTLYQAFASKAQEEEFRAELLQGLGWGEAKSRLFQLLDGQ------LGEARER 296

Query: 323 AMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGF 361
             +        + +  +   K        L  L    G 
Sbjct: 297 YHQLMSRPSDMEDLLLVGAKKARAVAAPFLAELREAVGL 335


>gi|121606168|ref|YP_983497.1| tryptophanyl-tRNA synthetase [Polaromonas naphthalenivorans CJ2]
 gi|120595137|gb|ABM38576.1| tryptophanyl-tRNA synthetase [Polaromonas naphthalenivorans CJ2]
          Length = 439

 Score = 44.8 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 22/83 (26%), Positives = 30/83 (36%), Gaps = 13/83 (15%)

Query: 174 FNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSP------ 227
           F Y +L   D + L K +   +   G DQ  +I    D+ +R        L  P      
Sbjct: 141 FMYPVLMGADIL-LFKAHKVPV---GRDQVQHIEMARDMAQRFNHLYGEHLVLPEAQIEE 196

Query: 228 ---LLTTASGTKMGKTLSGAIWL 247
              LL    G KM K+    I L
Sbjct: 197 SVALLPGLDGRKMSKSYDNTIPL 219


>gi|297171070|gb|ADI22082.1| tryptophanyl-tRNA synthetase [uncultured Planctomycetales bacterium
           HF0200_11L05]
          Length = 335

 Score = 44.8 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 22/103 (21%), Positives = 36/103 (34%), Gaps = 15/103 (14%)

Query: 166 EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALT 225
           ++ ++   FNY IL A D +     ++  +   G DQ  ++    D+  R          
Sbjct: 126 DKGITMGLFNYPILMAADILM----FNADVVPVGQDQKQHVEMTRDIALRFNHHYGDVFN 181

Query: 226 SP---------LLTTASGTKMGKTLSG--AIWLNKEMTSPYNF 257
            P          L    G KM K+      I+LNK+       
Sbjct: 182 IPDVSIEEDAGTLPGIDGRKMSKSYKNVIPIFLNKDDLRKKIM 224


>gi|120603863|ref|YP_968263.1| tryptophanyl-tRNA synthetase [Desulfovibrio vulgaris DP4]
 gi|120564092|gb|ABM29836.1| tryptophanyl-tRNA synthetase [Desulfovibrio vulgaris DP4]
          Length = 329

 Score = 44.8 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 37/222 (16%), Positives = 70/222 (31%), Gaps = 39/222 (17%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGG---TSIIGDPSFRDESRRMMRSQ 97
           G   T   LH GH   ++  +   +   +    +      TS   +PS   E    +   
Sbjct: 11  GMRPTGP-LHLGHYFGVLKNWVEMQHEMEAYFFVADWHALTSDFAEPSRIKEFVPELVKD 69

Query: 98  EIQENIE---KIKGIFSSFIKYGTGKTDALMLNNETWLC-SIKYIDLLREIGSFFSVNRM 153
            +   ++    +    S   ++        M+   +WL  +  Y +  +EI +    N  
Sbjct: 70  WVAAGLDPEKCVIFQQSQVKEHAELHLILSMITPVSWLERNPTYKEQQQEITTKDLGNYG 129

Query: 154 LSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLG 213
                                 Y +L A D + + +     +   G DQ  ++    ++G
Sbjct: 130 F-------------------LGYPVLMASDIL-IYRPKWVPV---GQDQLPHLELTREIG 166

Query: 214 ERLKT------PKLFALTSPLL--TTASGTKMGKTLSGAIWL 247
            R         P+  A  +P        G KM K+    I+L
Sbjct: 167 RRFNHFYGDFFPEPEARLTPAAKCPGLDGRKMSKSYGNGIYL 208


>gi|254369011|ref|ZP_04985024.1| conserved hypothetical protein [Francisella tularensis subsp.
           holarctica FSC022]
 gi|254369014|ref|ZP_04985027.1| conserved hypothetical protein [Francisella tularensis subsp.
           holarctica FSC022]
 gi|157121932|gb|EDO66102.1| conserved hypothetical protein [Francisella tularensis subsp.
           holarctica FSC022]
 gi|157121935|gb|EDO66105.1| conserved hypothetical protein [Francisella tularensis subsp.
           holarctica FSC022]
          Length = 334

 Score = 44.8 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 22/93 (23%), Positives = 36/93 (38%), Gaps = 16/93 (17%)

Query: 166 EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL--------GERLK 217
           ++ ++   FNY +L A D +     +D  L   G DQ  +I    D+         + + 
Sbjct: 128 DKGITMGLFNYPVLMAADILI----FDADLVPVGKDQIQHIEIARDIANRFNHIYQKPVL 183

Query: 218 TPKLFALTS---PLLTTASGTKMGKTLSGAIWL 247
                ALTS     +    G KM K+    I +
Sbjct: 184 KAPQ-ALTSEDSQTILGLDGRKMSKSYDNTIAI 215


>gi|154297330|ref|XP_001549092.1| hypothetical protein BC1G_12069 [Botryotinia fuckeliana B05.10]
 gi|150858574|gb|EDN33766.1| hypothetical protein BC1G_12069 [Botryotinia fuckeliana B05.10]
          Length = 415

 Score = 44.8 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 32/230 (13%), Positives = 80/230 (34%), Gaps = 25/230 (10%)

Query: 18  IHQISNPRELDI--LCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMG 75
           + ++ +   +D   L  +  +  Y G   T    H G+   ++ +  L + G     L+ 
Sbjct: 18  LAEVLDGDIIDNVILKEKRPLKVYWGTATTGRP-HCGYFVPMIKIAELLRAGCNVKVLLA 76

Query: 76  GGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK---YGTGKTDALMLNNETWL 132
                +      D  +  +  + ++   +  + +  S ++       + + ++ ++   L
Sbjct: 77  DIHGYL------DNMKAPL--ELVEYRAKYYERVIKSALRAVGVDLSRLEFVLGSSYQ-L 127

Query: 133 CSIKYIDLLREIG-SFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
                +D  +  G +  +V +    E V+   + +   +     Y ++QA D   L    
Sbjct: 128 DKEYTMDRFKLEGITRINVAQKAGAEVVK---QTDDP-TLGGLIYPLMQALDEQYL---- 179

Query: 192 DCRLQMGGSDQWGNIICGID-LGERLKTPKLFALTSPLLTTASGTKMGKT 240
           D   Q GG DQ        + L +     +   + + +       KM  +
Sbjct: 180 DVDAQFGGVDQRKIFTFAKENLPKINYKVRAHLMNTMVPGLGEAAKMSSS 229


>gi|46578559|ref|YP_009367.1| tryptophanyl-tRNA synthetase [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|46447970|gb|AAS94626.1| tryptophanyl-tRNA synthetase [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|311232484|gb|ADP85338.1| tryptophanyl-tRNA synthetase [Desulfovibrio vulgaris RCH1]
          Length = 329

 Score = 44.8 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 37/222 (16%), Positives = 70/222 (31%), Gaps = 39/222 (17%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGG---TSIIGDPSFRDESRRMMRSQ 97
           G   T   LH GH   ++  +   +   +    +      TS   +PS   E    +   
Sbjct: 11  GMRPTGP-LHLGHYFGVLKNWVEMQHEMEAYFFVADWHALTSDFAEPSRIKEFVPELVKD 69

Query: 98  EIQENIE---KIKGIFSSFIKYGTGKTDALMLNNETWLC-SIKYIDLLREIGSFFSVNRM 153
            +   ++    +    S   ++        M+   +WL  +  Y +  +EI +    N  
Sbjct: 70  WVAAGLDPEKCVIFQQSQVKEHAELHLILSMITPVSWLERNPTYKEQQQEITTKDLGNYG 129

Query: 154 LSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLG 213
                                 Y +L A D + + +     +   G DQ  ++    ++G
Sbjct: 130 F-------------------LGYPVLMASDIL-IYRPKWVPV---GQDQLPHLELTREIG 166

Query: 214 ERLKT------PKLFALTSPLL--TTASGTKMGKTLSGAIWL 247
            R         P+  A  +P        G KM K+    I+L
Sbjct: 167 RRFNHFYGDFFPEPEARLTPAAKCPGLDGRKMSKSYGNGIYL 208


>gi|89255737|ref|YP_513098.1| tryptophanyl-tRNA synthetase [Francisella tularensis subsp.
           holarctica LVS]
 gi|115314232|ref|YP_762955.1| tryptophanyl-tRNA synthetase [Francisella tularensis subsp.
           holarctica OSU18]
 gi|156501693|ref|YP_001427758.1| tryptophanyl-tRNA synthetase [Francisella tularensis subsp.
           holarctica FTNF002-00]
 gi|167009720|ref|ZP_02274651.1| tryptophanyl-tRNA synthetase [Francisella tularensis subsp.
           holarctica FSC200]
 gi|254367111|ref|ZP_04983145.1| tryptophanyl-tRNA synthetase [Francisella tularensis subsp.
           holarctica 257]
 gi|290954028|ref|ZP_06558649.1| tryptophanyl-tRNA synthetase [Francisella tularensis subsp.
           holarctica URFT1]
 gi|295312586|ref|ZP_06803341.1| tryptophanyl-tRNA synthetase [Francisella tularensis subsp.
           holarctica URFT1]
 gi|89143568|emb|CAJ78747.1| Tryptophanyl-tRNA synthetase [Francisella tularensis subsp.
           holarctica LVS]
 gi|115129131|gb|ABI82318.1| tryptophan--tRNA ligase [Francisella tularensis subsp. holarctica
           OSU18]
 gi|134252935|gb|EBA52029.1| tryptophanyl-tRNA synthetase [Francisella tularensis subsp.
           holarctica 257]
 gi|156252296|gb|ABU60802.1| tryptophanyl-tRNA synthetase [Francisella tularensis subsp.
           holarctica FTNF002-00]
          Length = 334

 Score = 44.8 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 22/93 (23%), Positives = 36/93 (38%), Gaps = 16/93 (17%)

Query: 166 EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL--------GERLK 217
           ++ ++   FNY +L A D +     +D  L   G DQ  +I    D+         + + 
Sbjct: 128 DKGITMGLFNYPVLMAADILI----FDADLVPVGKDQIQHIEIARDIANRFNHIYQKPVL 183

Query: 218 TPKLFALTS---PLLTTASGTKMGKTLSGAIWL 247
                ALTS     +    G KM K+    I +
Sbjct: 184 KAPQ-ALTSEDSQTILGLDGRKMSKSYDNTIAI 215


>gi|268318769|ref|YP_003292425.1| hypothetical protein FI9785_274 [Lactobacillus johnsonii FI9785]
 gi|262397144|emb|CAX66158.1| trpS [Lactobacillus johnsonii FI9785]
          Length = 342

 Score = 44.8 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 38/225 (16%), Positives = 73/225 (32%), Gaps = 37/225 (16%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     LQ  G + P  ++    ++       D +R     ++I+ 
Sbjct: 12  PTGK-LHIGHYIGSLKNRVKLQNEGKYDPYIMIADTQAL------TDNAR---DPEKIKN 61

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
           ++ ++  +    +     K+   + +    L  +    +     +    N  +  E  + 
Sbjct: 62  SLIQV-ALDYLAVGLDPEKSTIYVQSQIPALFELTAYYMDLVTVARLERNPTVKTEIKQK 120

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKL 221
             K    + FL  NY + QA D       +   +   G DQ   +    ++         
Sbjct: 121 NFKDSIPIGFL--NYPVSQAADITA----FKATVIPVGDDQEPMLEQTREIVRTFNR--- 171

Query: 222 FALTSPL--------------LTTASGT-KMGKTLSGAIWLNKEM 251
              T  L              L    G  KM K+L  AI+L+ + 
Sbjct: 172 VYNTDILVEPKGYFPPKGQGRLPGLDGNAKMSKSLGNAIYLSDDA 216


>gi|229097809|ref|ZP_04228763.1| Tryptophanyl-tRNA synthetase [Bacillus cereus Rock3-29]
 gi|228685635|gb|EEL39559.1| Tryptophanyl-tRNA synthetase [Bacillus cereus Rock3-29]
          Length = 327

 Score = 44.8 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 31/161 (19%), Positives = 50/161 (31%), Gaps = 29/161 (18%)

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLF 222
           L+ +  ++   + Y IL A D + L +     +   G DQ  +I    D+         F
Sbjct: 118 LEIDAGVNMGLYTYPILMAADIL-LFQATHVPV---GKDQIQHIEIARDIATYFN--HTF 171

Query: 223 ALTSPL-----------LTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVS 271
            +T  L           L    G KM K+    I L  E           +   D+ + +
Sbjct: 172 GMTFTLPEYVVQEEGAILPGLDGRKMSKSYGNVIPLFAEREKLRKLILKIK--TDSSLPN 229

Query: 272 ----FAKRLT----TLPMSEIDRMAKLQGKEI--NEAKKII 302
                    T         EI  M +     I   + KK +
Sbjct: 230 EPKELETLFTIYKEFATKDEIQSMREKYETGIGWGDVKKEL 270


>gi|168262447|ref|ZP_02684420.1| tryptophanyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
 gi|205348849|gb|EDZ35480.1| tryptophanyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
          Length = 337

 Score = 44.8 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 35/217 (16%), Positives = 64/217 (29%), Gaps = 29/217 (13%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMR-SQEIQEN 102
            T  SLH GH    +      +  H+   L+     +       D      +    I + 
Sbjct: 13  PTG-SLHLGHYVGSLRQRVALQQDHQQYVLIADLQGL------TDNGSNPQKIRDNIPQV 65

Query: 103 IEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR 162
           +     +           T   + +    L  +  + +     +    N  +  E  +  
Sbjct: 66  LADYLAVG-----IDPALTTICLQSALPALAELTVLYMNIVTVARVERNPTVKNEIAQKG 120

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT---- 218
             R   + F    Y I QA D       +   +   G DQ   I    ++  ++ +    
Sbjct: 121 FTRSLPVGF--MAYPISQAADITA----FKAEMVPVGDDQLPMIEQTNEIVHKMNSLFSS 174

Query: 219 ---PKLFALTSPL--LTTASG-TKMGKTLSGAIWLNK 249
                  AL S +  L    G  KM K+L   + L+ 
Sbjct: 175 PVLRPCQALLSDMGRLPGIDGSAKMSKSLGNTLLLSA 211


>gi|187477711|ref|YP_785735.1| tryptophanyl-tRNA synthetase [Bordetella avium 197N]
 gi|115422297|emb|CAJ48821.1| tryptophanyl-tRNA synthetase [Bordetella avium 197N]
          Length = 440

 Score = 44.8 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 19/96 (19%), Positives = 35/96 (36%), Gaps = 14/96 (14%)

Query: 164 KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFA 223
           + +  ++   F+Y +L A D + +   +   +   G DQ  +I    D+ +R        
Sbjct: 124 EPDDGVTMGLFSYPVLMAADIL-IFNAHKVPV---GRDQIQHIEMARDIAQRFNHLYQGD 179

Query: 224 LTSP----------LLTTASGTKMGKTLSGAIWLNK 249
              P           L    G KM K+ +  I L +
Sbjct: 180 FFLPPEVQIEEDVATLPGLDGRKMSKSYNNTIPLYE 215


>gi|330833792|ref|YP_004402617.1| tryptophanyl-tRNA synthetase [Streptococcus suis ST3]
 gi|329308015|gb|AEB82431.1| tryptophanyl-tRNA synthetase [Streptococcus suis ST3]
          Length = 341

 Score = 44.8 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 47/310 (15%), Positives = 78/310 (25%), Gaps = 63/310 (20%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSIIGDPSFRDE--SRRMMRSQEIQ 100
            T   LH GH    +     LQ  G   + +       + D     +         + + 
Sbjct: 12  PTGK-LHIGHYVGSLKNRVLLQDAGQHELFVF------LADQQALTDHAKEPQKIVESVG 64

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
                              KT   + +    L  +    +     +    N  +  E  +
Sbjct: 65  NVALDYLAAG-----LDPAKTTIFIQSQIPELAELTMYYMNLVSVARLERNPTVKTEIAQ 119

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
                     FL   Y + QA D      N+   + +G +DQ   I    ++        
Sbjct: 120 KGFGEGIPAGFL--VYPVSQAADITAFKANF---VPVG-NDQKPMIEQTREIVRSFNHAY 173

Query: 221 LFALTSPL---------------LTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNI 264
               T  L               L    G  KM K+L   I+L  +M             
Sbjct: 174 Q---TDILVEPEGIYPENEAAGRLPGLDGNAKMSKSLGNGIYLADDM------------- 217

Query: 265 DDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAM 324
            D          T      ++   K++G  +              V GREE +    A  
Sbjct: 218 -DTLKKKVMSMYTDPNHIRVEDPGKIEGNMV---------FHYLDVFGREEDKAEIEAMK 267

Query: 325 ECFDMSIHSQ 334
           E +       
Sbjct: 268 EHYQRGGLGD 277


>gi|302816218|ref|XP_002989788.1| hypothetical protein SELMODRAFT_130546 [Selaginella moellendorffii]
 gi|300142354|gb|EFJ09055.1| hypothetical protein SELMODRAFT_130546 [Selaginella moellendorffii]
          Length = 333

 Score = 44.8 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 48/244 (19%), Positives = 78/244 (31%), Gaps = 33/244 (13%)

Query: 15  RGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +   +     QG     Y G   ++ SLH GHL Q M   +LQ         
Sbjct: 54  RGIFFAHRDLESILDAYEQGHKFFLYTGRGPSSESLHLGHLVQFMFTKYLQDAF------ 107

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSS-FIKYGTGKTDALMLNNETWL 132
                 +I       +  + +     QE  +++    +   I  G       + +N  ++
Sbjct: 108 --DVPLVIQL----SDDEKFIWKDISQEECQRLGRNNAKDIISCGFRLERTFIFSNLDYV 161

Query: 133 CSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ-AYDFVELAKN- 190
               + ++L  I SF S+N M +       L  E  +   +  Y  +Q A  F     + 
Sbjct: 162 SGALFDNVL-TISSFLSINAMSA--VFG--LNAETDV-LGKLLYPAVQIAPAFSTSFNDV 215

Query: 191 ------YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLT----TASGTKMGKT 240
                   C +     DQ        DL  RLK  K   + S  L          KM  +
Sbjct: 216 FGEGIKMRCLIPC-AIDQDPYFRLSRDLAPRLKLYKPALIESRFLPSIQAGDDSGKMSAS 274

Query: 241 LSGA 244
              +
Sbjct: 275 SPNS 278


>gi|114654737|ref|XP_001158558.1| PREDICTED: tryptophanyl-tRNA synthetase isoform 1 [Pan troglodytes]
          Length = 455

 Score = 44.8 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 39/248 (15%), Positives = 84/248 (33%), Gaps = 31/248 (12%)

Query: 15  RGFIHQISN-PRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +  + LD   ++     Y G   ++ ++H GHL   +   WLQ   + P+ +
Sbjct: 134 RGIFFSHRDMNQVLDAYENKKPFYLYTGRGPSSEAMHVGHLIPFIFTKWLQDVFNVPLVI 193

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                         D+ + + +   + +            I  G       + ++  ++ 
Sbjct: 194 -----------QMTDDEKYLWKDLTLDQAYSYAVENAKDIIACGFDINKTFIFSDLDYMG 242

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA-----YDFVELA 188
                   + +     + + ++F  V+       S    + ++  +QA       F ++ 
Sbjct: 243 --MSSGFYKNV---VKIQKHVTFNQVKGIFGFTDSDCIGKISFPAIQAAPSFSNSFPQIF 297

Query: 189 K---NYDCRLQMGGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTASGTKMGKTLS 242
           +   +  C +     DQ        D+  R+  PK   L +   P L  A  TKM  +  
Sbjct: 298 RDRTDIQCLIPC-AIDQDPYFRMTRDVAPRIGYPKPALLHSTFFPALQGAQ-TKMSASDP 355

Query: 243 G-AIWLNK 249
             +I+L  
Sbjct: 356 NSSIFLTD 363


>gi|55438|emb|CAA49348.1| tryptophan--tRNA ligase [Mus musculus]
          Length = 481

 Score = 44.8 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 39/248 (15%), Positives = 85/248 (34%), Gaps = 31/248 (12%)

Query: 15  RGFIHQISN-PRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +  + LD   ++     Y G   ++ ++H GHL   +   WL+   + P+ +
Sbjct: 138 RGIFFSHRDMNQILDAYENKKPFYLYTGRGPSSEAMHLGHLVPFIFTKWLEDVFNVPLVI 197

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                         D+ + + +   +++            I  G       + ++  ++ 
Sbjct: 198 -----------QMSDDEKYLWKDLTLEQAYSYTVENAKDIIACGFDINKTFIFSDLEYMG 246

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA-----YDFVELA 188
                   R +     + + ++F  V+       S    + ++  +QA       F ++ 
Sbjct: 247 Q--SPGFYRNV---VKIQKHVTFNQVKGIFGFTDSDCIGKSSFPAVQAAPSFSNSFPKIF 301

Query: 189 K---NYDCRLQMGGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTASGTKMGKTLS 242
           +   +  C +     DQ        D+  R+  PK   L +   P L  A  TKM  +  
Sbjct: 302 RDRTDIQCLIPC-AIDQDPYFRMTRDVAPRIGHPKPALLHSTFFPALQGAQ-TKMSASDP 359

Query: 243 G-AIWLNK 249
             +I+L  
Sbjct: 360 NSSIFLTD 367


>gi|315426331|dbj|BAJ47972.1| tryptophanyl-tRNA synthetase [Candidatus Caldiarchaeum
           subterraneum]
          Length = 362

 Score = 44.8 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 44/242 (18%), Positives = 79/242 (32%), Gaps = 31/242 (12%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ-KTGHKPISLMGGGTSIIGDPS 85
           LD   S      Y G   +   +H GH+       WLQ + G      M        D  
Sbjct: 68  LDDHESGRGFYLYTGRGPSGP-MHVGHIIPFFFTKWLQERFGANVYIQMTD------DEK 120

Query: 86  FRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIG 145
           F +E+R +        +++ +  I +             +  N  ++  +          
Sbjct: 121 FLEETRGLTLEDTAYWSLDNMVNIAAVGFDPDKT----FIFRNTEFMARMYRP------- 169

Query: 146 SFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGN 205
               V R ++F  VR+     +  +     +  +Q      + +   C +     DQ   
Sbjct: 170 -VLKVARKINFSWVRAVFGFNEQTNIGMVFFPAIQ--IVPTMFEKRRCLIP-AAIDQDPY 225

Query: 206 IICGIDLGERLKTPKLFAL----TSPLLTTASGTKMGKTLS-GAIWL-NKEMTSPYNFWQ 259
                D+ E L   K  A+      PL T  +G KM  +    A++L + + T     WQ
Sbjct: 226 WRIQRDIAESLGFYKAAAIHSRFLMPL-TGPTG-KMSASQPEAAVFLTDDDKTVRKKIWQ 283

Query: 260 YW 261
            +
Sbjct: 284 AF 285


>gi|229018578|ref|ZP_04175434.1| hypothetical protein bcere0030_30990 [Bacillus cereus AH1273]
 gi|229024832|ref|ZP_04181265.1| hypothetical protein bcere0029_31390 [Bacillus cereus AH1272]
 gi|228736466|gb|EEL87028.1| hypothetical protein bcere0029_31390 [Bacillus cereus AH1272]
 gi|228742717|gb|EEL92861.1| hypothetical protein bcere0030_30990 [Bacillus cereus AH1273]
          Length = 347

 Score = 44.8 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 22/96 (22%), Positives = 34/96 (35%), Gaps = 17/96 (17%)

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLF 222
           L+ +  ++   + Y IL A D + L +     +   G DQ  +I    D+         F
Sbjct: 138 LENDAGVNMGLYTYPILMAADIL-LFQATHVPV---GKDQIQHIEIARDIATYFN--HTF 191

Query: 223 ALTSPL-----------LTTASGTKMGKTLSGAIWL 247
            +T  L           L    G KM K+    I L
Sbjct: 192 GMTFTLPEFVIQEDGAILPGLDGRKMSKSYGNVIPL 227


>gi|145347608|ref|XP_001418255.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144578484|gb|ABO96548.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 349

 Score = 44.8 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 38/230 (16%), Positives = 82/230 (35%), Gaps = 25/230 (10%)

Query: 19  HQISNPRELDILCSQGVVTA-YIGYDLTASSLHA--GHLTQLMLLFWLQKTGHKPISLMG 75
            +   P EL  L  +      Y G++ +   +H   G +  L +   L K G      + 
Sbjct: 15  EECIQPDELRKLLEKKPTPVCYDGFEPSGR-MHIAQGVMKALNVNK-LTKIGCHFKFWVA 72

Query: 76  GGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSI 135
              +++ +    D        ++IQ+  + +  ++ +    G        + +   +   
Sbjct: 73  DWFALMNNKMGGD-------LKKIQKVGKYMVEVWKAI---GMDLDHVEFVWSSEEINKK 122

Query: 136 KYI--DLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDC 193
                 L+ +I     + R+L    +  R + ++ L+  +  Y  +Q  D   L  +  C
Sbjct: 123 ADEYWPLVLDIARKNKLARILRCSQIMGRSESDE-LAASQIFYPCMQCADIFFLKADI-C 180

Query: 194 RLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLLTT--ASGTKMGKT 240
           +L   G DQ    +   +  + +K   K   L+  +L        KM K+
Sbjct: 181 QL---GMDQRKVNMLAREYCDDIKRKNKPIILSHHMLMGLKQGQEKMSKS 227


>gi|312958952|ref|ZP_07773471.1| tryptophanyl-tRNA synthetase [Pseudomonas fluorescens WH6]
 gi|311286722|gb|EFQ65284.1| tryptophanyl-tRNA synthetase [Pseudomonas fluorescens WH6]
          Length = 451

 Score = 44.8 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 36/219 (16%), Positives = 60/219 (27%), Gaps = 34/219 (15%)

Query: 166 EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL----KTPKL 221
           +  ++   ++Y +L A D + +   +   +   G DQ  ++    D+G+R        K 
Sbjct: 128 DAGITMGLYSYPVLMAADIL-MFNAHKVPV---GRDQIQHVEMARDIGQRFNHLFGNGKE 183

Query: 222 FALTSP---------LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNID------- 265
           F  T P          L    G KM K+    I L        +                
Sbjct: 184 F-FTMPEALIEESVATLPGLDGRKMSKSYDNTIPLFTSAKDMKDAISRIVTDSRAPGEAK 242

Query: 266 DADVVSFAKR---LTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATA 322
           D D            +    E  R   LQG    EAK  +   +           +A   
Sbjct: 243 DPDNSHLFTLYQAFASKAQEEEFRAELLQGLGWGEAKNRLFQLLDGQ------LGEARER 296

Query: 323 AMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGF 361
             +        + +  +   K        L  L    G 
Sbjct: 297 YHQLMSRPSDMEDLLLVGAKKARAVAAPFLAELREAVGL 335


>gi|302345864|ref|YP_003814217.1| pseudouridylate synthase [Prevotella melaninogenica ATCC 25845]
 gi|302150213|gb|ADK96475.1| pseudouridylate synthase [Prevotella melaninogenica ATCC 25845]
          Length = 514

 Score = 44.8 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 13/71 (18%), Positives = 30/71 (42%), Gaps = 1/71 (1%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           + +  + L   +  AG   S  EA   + S A+ +N  ++     ++   D     +  +
Sbjct: 274 DPNEPIRLNKYLANAGVC-SRREADEFILSGAVTVNGEVVKELGSKVMRTDEVYFQDKLV 332

Query: 405 SFGKKNHIICH 415
           S  KK +++ +
Sbjct: 333 SLEKKVYVLLN 343


>gi|116492060|ref|YP_803795.1| tryptophanyl-tRNA synthetase II [Pediococcus pentosaceus ATCC
           25745]
 gi|116102210|gb|ABJ67353.1| tryptophanyl-tRNA synthetase [Pediococcus pentosaceus ATCC 25745]
          Length = 342

 Score = 44.8 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 52/347 (14%), Positives = 109/347 (31%), Gaps = 56/347 (16%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     LQ TG ++   ++    ++  +    ++ R  +    +  
Sbjct: 13  PTGK-LHIGHYVGSLKNRVQLQNTGDYETFIMIADMQALTDNARDPEKIRNSLIQVALDY 71

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
               I             K+   + +    L  +      +   +  SV R+    +V++
Sbjct: 72  LAVGI----------DPAKSTIFVQSQIPALSELT-----QHYMNLVSVARLERNPTVKT 116

Query: 162 RLKR---EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
            +K+    QS+    F Y + QA D      +    + +G  DQ   +    ++      
Sbjct: 117 EIKQKAFGQSIPAGFFTYPVSQAADITAFKAD---TVPVG-DDQEPMLEQTREIVRSFNN 172

Query: 219 PKL-FALTSP----------LLTTASGT-KMGKTLSGAIWL--NKEMTSPYNFWQYW--- 261
                 L  P           +    G  KM K+L  AI+L  ++E         Y    
Sbjct: 173 IYQKEVLVEPEGYFPPKGMGRIPGLDGNAKMSKSLGNAIYLADDEETIQKKVMSMYTDPQ 232

Query: 262 -RNIDD------ADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAK------KIIATEITT 308
              ++D        V ++            +   + Q   + + K      +++  E+  
Sbjct: 233 HIRVEDPGHIEGNTVFTYLDIFDPDKQKVQELKDQYQAGGLGDVKIKRYLNEVLQNELRP 292

Query: 309 MVHGREEAEKAATA-AMECFDMSIHSQHMPTISISKDEVSRGMGLLT 354
           +   RE  E    A      D S  +  +   ++ +   + G+    
Sbjct: 293 IRERRERYEADIDAVYQILKDGSDKANAVAEQTLKEVRDAIGINYFD 339


>gi|238499123|ref|XP_002380796.1| tyrosyl-tRNA synthetase [Aspergillus flavus NRRL3357]
 gi|220692549|gb|EED48895.1| tyrosyl-tRNA synthetase [Aspergillus flavus NRRL3357]
          Length = 381

 Score = 44.8 bits (105), Expect = 0.028,   Method: Composition-based stats.
 Identities = 40/233 (17%), Positives = 80/233 (34%), Gaps = 22/233 (9%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
           L        ++     +IL  +     Y G   T    H G+    + +  L +     +
Sbjct: 11  LISENLAEILNPEIIENILIEKRNPRIYWGTATTGRP-HVGYFLAALKIAQLLRAQCDVV 69

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA--LMLNNE 129
            L+    + +      D  +  +  + ++   +  + I ++ ++     TD    +L + 
Sbjct: 70  VLLADVHAFL------DNLKAPL--ELVENRAQYYRKIITAILESVGVPTDKLEFVLGSS 121

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSF--ESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
                   +D+ R + S  S         E V+        LS L   Y +LQ  D   L
Sbjct: 122 YQKSPEYVMDVYR-LSSLISEGDAKKAGAEVVKQ--TENAPLSGL--LYPVLQVLDEEHL 176

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
                  +Q+GG DQ        +   ++   K   L +P+++   G KM  +
Sbjct: 177 K----VDVQLGGMDQRKLFTAATEWLPKIGYRKRAHLINPMISGLKGAKMSSS 225


>gi|83645342|ref|YP_433777.1| tryptophanyl-tRNA synthetase [Hahella chejuensis KCTC 2396]
 gi|83633385|gb|ABC29352.1| tryptophanyl-tRNA synthetase [Hahella chejuensis KCTC 2396]
          Length = 336

 Score = 44.8 bits (105), Expect = 0.028,   Method: Composition-based stats.
 Identities = 21/109 (19%), Positives = 40/109 (36%), Gaps = 21/109 (19%)

Query: 166 EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALT 225
           ++ ++   F+Y +L + D + +   +   +   G DQ  ++    D+  R     +F  T
Sbjct: 128 DKGVTMGLFSYPVLMSADIL-MFNAHKVPV---GKDQVQHLEMCRDIAARFN--HIFGET 181

Query: 226 SPL-----------LTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
             L           L    G KM K+ +  I L      P   ++   N
Sbjct: 182 FVLPEVVVSEESMVLPGLDGRKMSKSYNNTIPL----FEPEKKFRKLIN 226


>gi|21244724|ref|NP_644306.1| tryptophanyl-tRNA synthetase [Xanthomonas axonopodis pv. citri str.
           306]
 gi|25009425|sp|Q8PFH5|SYW_XANAC RecName: Full=Tryptophanyl-tRNA synthetase; AltName:
           Full=Tryptophan--tRNA ligase; Short=TrpRS
 gi|21110416|gb|AAM38842.1| tryptophanyl-tRNA synthetase [Xanthomonas axonopodis pv. citri str.
           306]
          Length = 432

 Score = 44.8 bits (105), Expect = 0.028,   Method: Composition-based stats.
 Identities = 20/96 (20%), Positives = 33/96 (34%), Gaps = 18/96 (18%)

Query: 164 KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFA 223
             +  ++   F Y +L A D + +   +   +   G DQ  +I    D  +R     ++ 
Sbjct: 127 DEDAGVTAGLFMYPVLMAADIL-IFNAHQVPV---GRDQIQHIEMARDFAQRFN--HVYG 180

Query: 224 ---LTSP---------LLTTASGTKMGKTLSGAIWL 247
               T P          L    G KM K+    I L
Sbjct: 181 REFFTLPEAVIDEQVSTLPGLDGRKMSKSYGNTIPL 216


>gi|332299843|ref|YP_004441764.1| tryptophanyl-tRNA synthetase [Porphyromonas asaccharolytica DSM
           20707]
 gi|332176906|gb|AEE12596.1| tryptophanyl-tRNA synthetase [Porphyromonas asaccharolytica DSM
           20707]
          Length = 331

 Score = 44.8 bits (105), Expect = 0.028,   Method: Composition-based stats.
 Identities = 44/298 (14%), Positives = 90/298 (30%), Gaps = 51/298 (17%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   T   LH G+    M  F   +  +     +    S+   P        +  +  I 
Sbjct: 7   GIRPTG-HLHIGNYYGAMRSFLEMQEQYDCYFFIADWHSLTTHPHP---GDIVQDTDTIL 62

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
              E +             ++D   +        +     L E+    +          +
Sbjct: 63  --AEYLACGLDPSKVVLYRQSDVPEV--LELYLYLNMNAYLGELQRTTTFKE-------K 111

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT-- 218
           +R K+  +++     Y  L A D + L +     +   G DQ  N+        R  T  
Sbjct: 112 AR-KQPDNVNAGLLTYPTLMAADIL-LQRAVKVPV---GKDQEQNMEMARRFARRFNTIY 166

Query: 219 ------PKLF--ALTSPL-LTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNI---- 264
                       A++ P+ +    G+ KMGK+   AI+L ++     +  +         
Sbjct: 167 GVEYFTEPASWTAMSKPIKVPGLDGSGKMGKSEGNAIYLYEDDK---SITKKVMRAVTDA 223

Query: 265 ----DDAD----VVSFAKRLTTLPMSEIDRMAKLQGKE----INEAKKIIATEITTMV 310
                D+     V +    +  +   E     +    +      + KK +A ++ T +
Sbjct: 224 GPTEPDSKPSEPVENLFTIMDLVSAPETVAHFRQCYADCSIRYGDLKKQLAADLLTAI 281


>gi|238062930|ref|ZP_04607639.1| tryptophanyl-tRNA synthetase [Micromonospora sp. ATCC 39149]
 gi|237884741|gb|EEP73569.1| tryptophanyl-tRNA synthetase [Micromonospora sp. ATCC 39149]
          Length = 341

 Score = 44.8 bits (105), Expect = 0.028,   Method: Composition-based stats.
 Identities = 29/221 (13%), Positives = 65/221 (29%), Gaps = 27/221 (12%)

Query: 41  GYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           G   T    H G+    ++    L  + ++ +  +    ++          R  ++    
Sbjct: 14  GIKPTGEP-HLGNYIGAILPALRLADS-YESLYFIADYHALT-----TIRDRDQLQHYTR 66

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
                 +             ++D   +    W+ +      L      +   R  + E+ 
Sbjct: 67  SVAATWLAAGLDPDRTTFYRQSDIPEIFELNWILACMASKGLMNRAHAYKAARDRNRETG 126

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLG------ 213
           +  L    ++    FNY +L A D + +  +    +   G DQ  ++    D+       
Sbjct: 127 KEDLDAGVNMGL--FNYPVLMAVDILIMDAD----VVPVGRDQVQHVEYAADIAGSFNAV 180

Query: 214 ---ERLKTPKLFAL----TSPLLTTASGTKMGKTLSGAIWL 247
                        +    ++  L    G KM K+    I L
Sbjct: 181 YGDRFKFKIPAAVIPDEGSAHTLPGTDGRKMSKSYGNTIPL 221


>gi|229116819|ref|ZP_04246203.1| Tryptophanyl-tRNA synthetase [Bacillus cereus Rock1-3]
 gi|228666651|gb|EEL22109.1| Tryptophanyl-tRNA synthetase [Bacillus cereus Rock1-3]
          Length = 332

 Score = 44.8 bits (105), Expect = 0.028,   Method: Composition-based stats.
 Identities = 32/159 (20%), Positives = 48/159 (30%), Gaps = 25/159 (15%)

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLF 222
           L+ +  ++   + Y IL A D + L +     +   G DQ  +I    D+         F
Sbjct: 123 LEIDAGVNMGLYTYPILMAADIL-LFQATHVPV---GKDQIQHIEIARDIATYFN--HTF 176

Query: 223 ALTSPL-----------LTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWR------NID 265
            +T  L           L    G KM K+    I L  E           +      N  
Sbjct: 177 GMTFTLPEYVVQEEGAILPGLDGRKMSKSYGNVIPLFAEREKLRKLILKIKTDSSLPNEP 236

Query: 266 DADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKII 302
                SF          EI  M +     I   + KK +
Sbjct: 237 KELETSFTIYKEFATKDEIQSMREKYETGIGWGDVKKEL 275


>gi|255081786|ref|XP_002508115.1| tRNA synthetase [Micromonas sp. RCC299]
 gi|226523391|gb|ACO69373.1| tRNA synthetase [Micromonas sp. RCC299]
          Length = 495

 Score = 44.8 bits (105), Expect = 0.028,   Method: Composition-based stats.
 Identities = 61/344 (17%), Positives = 114/344 (33%), Gaps = 49/344 (14%)

Query: 15  RGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG         ++     +G     Y G   ++ +LH GHL       WLQ+    P+ +
Sbjct: 69  RGMFFAHRELDQIVTAYEKGEKFYLYTGRGPSSEALHLGHLIPFHFTRWLQEAFKVPLVI 128

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                      S + E  R +  +  ++ I            +   +T      N   +C
Sbjct: 129 QLTDDEKFLWKSLKLEDARRLARENAKDIIACG---------FDPRRTFIFSDVNY--MC 177

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEF-------NYMILQAYDFVE 186
           +  Y+++L+ I    + N+  +          E ++  + F        +     + F  
Sbjct: 178 TPFYLNVLK-IAKCVTFNQ--ARGIFG--FSGESNIGQVGFPPTQAAPAFPDCFPHLFGT 232

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFAL---TSPLLTTASGTKMGKTLS- 242
             K+  C +     DQ        D   R+   K   +     P L   SG KM  +   
Sbjct: 233 DKKSLRCLIPC-AIDQDPYFRMTRDAAPRIGGYKPALIESRFFPALKGESG-KMSASDPT 290

Query: 243 GAIWLN------KEMTSPYNFWQYWRNID-------DADVVSFAKRLTTL--PMSEIDRM 287
            AI++       K+  + Y F      ++       D +V    K L        ++  +
Sbjct: 291 SAIYVTDTPKQIKDKVNKYAFSGGRLTVEEHREKGGDLEVDISWKWLNFFMDDDDKLRTI 350

Query: 288 AKLQGKEIN---EAKKIIATEITTMVHGREEA-EKAATAAMECF 327
            +  G       E KK +   +T M+   +EA  K + A ++ F
Sbjct: 351 GEAYGSGAMLSGEIKKELVECLTPMIVAHQEARAKVSDAVVDQF 394


>gi|253752814|ref|YP_003025955.1| tryptophanyl-tRNA synthetase [Streptococcus suis SC84]
 gi|253754639|ref|YP_003027780.1| tryptophanyl-tRNA synthetase [Streptococcus suis P1/7]
 gi|253756572|ref|YP_003029712.1| tryptophanyl-tRNA synthetase [Streptococcus suis BM407]
 gi|251817103|emb|CAZ52755.1| tryptophanyl-tRNA synthetase [Streptococcus suis SC84]
 gi|251819036|emb|CAZ56883.1| tryptophanyl-tRNA synthetase [Streptococcus suis BM407]
 gi|251820885|emb|CAR47651.1| tryptophanyl-tRNA synthetase [Streptococcus suis P1/7]
 gi|319759230|gb|ADV71172.1| tryptophanyl-tRNA synthetase II [Streptococcus suis JS14]
          Length = 341

 Score = 44.8 bits (105), Expect = 0.029,   Method: Composition-based stats.
 Identities = 47/310 (15%), Positives = 78/310 (25%), Gaps = 63/310 (20%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSIIGDPSFRDE--SRRMMRSQEIQ 100
            T   LH GH    +     LQ  G   + +       + D     +         + + 
Sbjct: 12  PTGK-LHIGHYVGSLKNRVLLQDAGQHELFVF------LADQQALTDHAKEPQKIVESVG 64

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
                              KT   + +    L  +    +     +    N  +  E  +
Sbjct: 65  NVALDYLAAG-----LDPAKTTIFIQSQIPELAELTMYYMNLVSVARLERNPTVKTEIAQ 119

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
                     FL   Y + QA D      N+   + +G +DQ   I    ++        
Sbjct: 120 KGFGEGIPAGFL--VYPVSQAADITAFKANF---VPVG-NDQKPMIEQTREIVRSFNHAY 173

Query: 221 LFALTSPL---------------LTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNI 264
               T  L               L    G  KM K+L   I+L  +M             
Sbjct: 174 Q---TDILVEPEGIYPENEAAGRLPGLDGNAKMSKSLGNGIYLADDM------------- 217

Query: 265 DDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAM 324
            D          T      ++   K++G  +              V GREE +    A  
Sbjct: 218 -DTLKKKVMSMYTDPNHIRVEDPGKIEGNMV---------FHYLDVFGREEDKAEIEAMK 267

Query: 325 ECFDMSIHSQ 334
           E +       
Sbjct: 268 EHYQRGGLGD 277


>gi|218128458|ref|ZP_03457262.1| hypothetical protein BACEGG_00026 [Bacteroides eggerthii DSM 20697]
 gi|317475716|ref|ZP_07934975.1| tRNA synthetase class I [Bacteroides eggerthii 1_2_48FAA]
 gi|217989349|gb|EEC55662.1| hypothetical protein BACEGG_00026 [Bacteroides eggerthii DSM 20697]
 gi|316908099|gb|EFV29794.1| tRNA synthetase class I [Bacteroides eggerthii 1_2_48FAA]
          Length = 364

 Score = 44.8 bits (105), Expect = 0.029,   Method: Composition-based stats.
 Identities = 42/229 (18%), Positives = 69/229 (30%), Gaps = 40/229 (17%)

Query: 44  LTASSLHAGHLTQLMLLFW---LQKTGH--KPISLMGGGTSIIGDPSFRDESRRMMRSQE 98
            T   LH GH      L     LQ +G   K    +    ++         +  M   ++
Sbjct: 13  PTGR-LHIGHYVG--SLRRRVELQNSGLYDKTFVFIADAQAL---------TDNMENPEK 60

Query: 99  IQENIEKIKGIFSSFIKY-----GTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRM 153
           +++N+          + Y        K+   + +    LC + +  +     S    N  
Sbjct: 61  VRQNV------IEVALDYLACGLDPAKSTIFIQSQIPELCELTFYYMDLVTVSRLQRNPT 114

Query: 154 LSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRL---QMGGSDQ------WG 204
           +  E      +    + F  F Y I QA D     +     +   Q    +Q        
Sbjct: 115 VKTEIQMRNFETSIPVGF--FTYPISQAADITA-FRATTVPVGEDQEPMIEQAREIVRRF 171

Query: 205 NIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTS 253
           N I G  L E        A    L  T    KM K+L   I+L+     
Sbjct: 172 NFIYGDTLVEPEILLPDNAACLRLPGTDGKAKMSKSLGNCIYLSDTADE 220


>gi|148686750|gb|EDL18697.1| tryptophanyl-tRNA synthetase, isoform CRA_a [Mus musculus]
 gi|148686751|gb|EDL18698.1| tryptophanyl-tRNA synthetase, isoform CRA_a [Mus musculus]
 gi|148686752|gb|EDL18699.1| tryptophanyl-tRNA synthetase, isoform CRA_a [Mus musculus]
          Length = 200

 Score = 44.8 bits (105), Expect = 0.029,   Method: Composition-based stats.
 Identities = 14/60 (23%), Positives = 26/60 (43%), Gaps = 1/60 (1%)

Query: 15  RGFIHQISN-PRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +  + LD   ++     Y G   ++ ++H GHL   +   WLQ   + P+ +
Sbjct: 138 RGIFFSHRDMNQILDAYENKKPFYLYTGRGPSSEAMHLGHLVPFIFTKWLQDVFNVPLVI 197


>gi|229103881|ref|ZP_04234560.1| Tryptophanyl-tRNA synthetase [Bacillus cereus Rock3-28]
 gi|228679584|gb|EEL33782.1| Tryptophanyl-tRNA synthetase [Bacillus cereus Rock3-28]
          Length = 332

 Score = 44.8 bits (105), Expect = 0.029,   Method: Composition-based stats.
 Identities = 31/161 (19%), Positives = 50/161 (31%), Gaps = 29/161 (18%)

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLF 222
           L+ +  ++   + Y IL A D + L +     +   G DQ  +I    D+         F
Sbjct: 123 LEIDAGVNMGLYTYPILMAADIL-LFQATHVPV---GKDQIQHIEIARDIATYFN--HTF 176

Query: 223 ALTSPL-----------LTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVS 271
            +T  L           L    G KM K+    I L  E           +   D+ + +
Sbjct: 177 GMTFTLPEYVVQEEGAILPGLDGRKMSKSYGNVIPLFAEREKLRKLILKIK--TDSSLPN 234

Query: 272 ----FAKRLT----TLPMSEIDRMAKLQGKEI--NEAKKII 302
                    T         EI  M +     I   + KK +
Sbjct: 235 EPKELETLFTIYKEFATKDEIQSMREKYETGIGWGDVKKEL 275


>gi|159116851|ref|XP_001708646.1| Tryptophanyl-tRNA synthetase [Giardia lamblia ATCC 50803]
 gi|157436759|gb|EDO80972.1| Tryptophanyl-tRNA synthetase [Giardia lamblia ATCC 50803]
          Length = 429

 Score = 44.8 bits (105), Expect = 0.029,   Method: Composition-based stats.
 Identities = 22/140 (15%), Positives = 45/140 (32%), Gaps = 11/140 (7%)

Query: 15  RGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG  +   +  E      +G  +  Y G   ++ +LH GHL   +   +LQ      + +
Sbjct: 48  RGLFYAHRDFEEFLSYYEKGHPIYIYTGRGPSSGALHLGHLLPFIFTKYLQDAFKCYVVI 107

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                  I D      +R +  ++      E IK I +             +  N  +L 
Sbjct: 108 ------QITDDEKFLRNRSLSYAEVDSYTRENIKDIIACGFDPDKT----FIFINSQYLS 157

Query: 134 SIKYIDLLREIGSFFSVNRM 153
                     +     ++++
Sbjct: 158 LKNRYRFSCLVDRMLPISQL 177


>gi|156360855|ref|XP_001625239.1| predicted protein [Nematostella vectensis]
 gi|156212062|gb|EDO33139.1| predicted protein [Nematostella vectensis]
          Length = 399

 Score = 44.8 bits (105), Expect = 0.029,   Method: Composition-based stats.
 Identities = 44/241 (18%), Positives = 84/241 (34%), Gaps = 29/241 (12%)

Query: 12  LSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           L +RG      +    LD+         Y G   ++ S+H GHL   +   +LQ+    P
Sbjct: 55  LLKRGVFFSHRDLDAMLDVYEKGKPFYLYTGRGPSSESMHLGHLIPFIFTKYLQEAFDVP 114

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           + +      +  D  F      + ++ E QE            I  G       + ++  
Sbjct: 115 LVI-----QLTDDEKFF-----LKKNLECQETHRLAYENMKDIIACGFDPNKTFIFSDMD 164

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA-----YDFV 185
           ++      +      +   + + ++F  VRS     ++ +  +  +  +QA       F 
Sbjct: 165 YIG--SCPEF---YTNIMKIQKCITFNQVRSTFGFTETDNIGKIAFPAIQAAPSFSNSFP 219

Query: 186 ELA---KNYDCRLQMGGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTASGTKMGK 239
            +    K+  C +     DQ        D+  R+  PK   +F+   P L  A  TKM  
Sbjct: 220 HIFGDKKDIPCFIPC-AIDQDPYFRLTRDVAPRIGCPKPSLIFSTFFPALQGAK-TKMSA 277

Query: 240 T 240
           +
Sbjct: 278 S 278


>gi|302390984|ref|YP_003826804.1| 30S ribosomal protein S4P [Acetohalobium arabaticum DSM 5501]
 gi|302203061|gb|ADL11739.1| SSU ribosomal protein S4P [Acetohalobium arabaticum DSM 5501]
          Length = 208

 Score = 44.4 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 20/113 (17%), Positives = 46/113 (40%), Gaps = 3/113 (2%)

Query: 284 IDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSI-HSQHMPTISIS 342
           I+R     G++ N+ +K+  +E    +  +++  +    +   F      + + P I+  
Sbjct: 33  IERRPYAPGEQGNKRQKL--SEFGVQLREKQKVRQIYGVSESQFKKYFEMADNKPGITGE 90

Query: 343 KDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
                    L  ++ + GFA S NEAR+ ++     +N   +      ++  D
Sbjct: 91  NFLKILESRLDNIVYRLGFAASRNEARQLVRHGHFLVNGERVDIPSYLVEEGD 143


>gi|220702585|pdb|3FOC|A Chain A, Tryptophanyl-Trna Synthetase From Giardia Lamblia
 gi|220702586|pdb|3FOC|B Chain B, Tryptophanyl-Trna Synthetase From Giardia Lamblia
          Length = 451

 Score = 44.4 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 22/140 (15%), Positives = 45/140 (32%), Gaps = 11/140 (7%)

Query: 15  RGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG  +   +  E      +G  +  Y G   ++ +LH GHL   +   +LQ      + +
Sbjct: 70  RGLFYAHRDFEEFLSYYEKGHPIYIYTGRGPSSGALHLGHLLPFIFTKYLQDAFKCYVVI 129

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                  I D      +R +  ++      E IK I +             +  N  +L 
Sbjct: 130 ------QITDDEKFLRNRSLSYAEVDSYTRENIKDIIACGFDPDKT----FIFINSQYLS 179

Query: 134 SIKYIDLLREIGSFFSVNRM 153
                     +     ++++
Sbjct: 180 LKNRYRFSCLVDRMLPISQL 199


>gi|46199168|ref|YP_004835.1| tryptophanyl-tRNA synthetase [Thermus thermophilus HB27]
 gi|55981196|ref|YP_144493.1| tryptophanyl-tRNA synthetase [Thermus thermophilus HB8]
 gi|170292175|pdb|2EL7|A Chain A, Crystal Structure Of Tryptophanyl-Trna Synthetase From
           Thermus Thermophilus
 gi|170292176|pdb|2EL7|B Chain B, Crystal Structure Of Tryptophanyl-Trna Synthetase From
           Thermus Thermophilus
 gi|46196793|gb|AAS81208.1| tryptophanyl-tRNA synthetase [Thermus thermophilus HB27]
 gi|55772609|dbj|BAD71050.1| tryptophanyl-tRNA synthetase [Thermus thermophilus HB8]
          Length = 337

 Score = 44.4 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 36/178 (20%), Positives = 56/178 (31%), Gaps = 37/178 (20%)

Query: 174 FNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSP----LL 229
             Y +LQA D + + K     +   G DQ  +I    ++  R     LF  T P    LL
Sbjct: 127 LMYPVLQAADIL-IYKADTVPV---GEDQVQHIELTREIARRFN--HLFGETFPEPQALL 180

Query: 230 -------TTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDA----------DVVS 271
                      G  KM K+L   I L +      + WQ  +++ D           D   
Sbjct: 181 NPEAPRVPGIDGKAKMSKSLGNTIGLLEPE---ESIWQKIQHLPDDPQRIRLSDPGDPER 237

Query: 272 FAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMV---HGREEAEKAATAAMEC 326
                T L       + +   +E  +A   + T +   +   H  E        A   
Sbjct: 238 -TILFTYLSYFAPKDLVEALKEEYRKA--GVGTYVVKRILFDHLMEALRPIRERAEAL 292


>gi|326389494|ref|ZP_08211061.1| tryptophanyl-tRNA synthetase [Thermoanaerobacter ethanolicus JW
           200]
 gi|325994499|gb|EGD52924.1| tryptophanyl-tRNA synthetase [Thermoanaerobacter ethanolicus JW
           200]
          Length = 327

 Score = 44.4 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 46/295 (15%), Positives = 98/295 (33%), Gaps = 50/295 (16%)

Query: 37  TAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSII--GDPSFRDESRRMM 94
             + G   T   +H G+    M  F   +  ++         ++    DP       +++
Sbjct: 3   RVFSGVQPTGD-IHIGNYLGAMRQFVALQDDYECFFCAVDLHALTVPQDP-------KVL 54

Query: 95  RSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRML 154
           + + I+             I     K    + ++      + ++  L+ I  F  ++RM 
Sbjct: 55  KEKTIELAA------LYLAIGLDPKKVTIFIQSHVPAHAELAWL--LQCITYFGELSRMT 106

Query: 155 SFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
                + + K ++S+S   F Y  L A D + L   +   +   G DQ  ++    D+ +
Sbjct: 107 Q---FKDKSKGKESVSVGLFTYPDLMAADIL-LYNTHYVPV---GEDQKQHLELTRDIAQ 159

Query: 215 RLKT--PKLFALTSPLLTTASG---------TKMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
           R      + F +  P++               KM K+ S        +  P    +    
Sbjct: 160 RFNNRFGETFVVPEPMILKLGARIMSLTDPTKKMSKSDSDPNNRINLLDEPSVIKKKIMR 219

Query: 264 -IDDAD------------VVSFAKRLTTLPMSEIDR-MAKLQGKEINEAKKIIAT 304
            + D++            V +     +     EI+  + K +G+     KK +A 
Sbjct: 220 AVTDSETEIRIDWENKPGVSNLLTIYSLFTGMEIEEVVNKFKGQGYGTLKKELAE 274


>gi|262045084|ref|ZP_06018125.1| tryptophan-tRNA ligase [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|259037599|gb|EEW38829.1| tryptophan-tRNA ligase [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
          Length = 335

 Score = 44.4 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 35/216 (16%), Positives = 62/216 (28%), Gaps = 27/216 (12%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
            T   LH GH    +      +  H+   L+     +       D        +     +
Sbjct: 13  PTGQ-LHLGHYVGSLRQRVALQHDHQQFILIADLQGL------TDNGSNPQ--KISHHIL 63

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL 163
           E +    +  I      T   + +    L  +  + +     +    N  +  E  +   
Sbjct: 64  EVMADYLAVGID--PRLTTICLQSALPALAELSALYMNIVTVARVERNPTVKNEIAQKGF 121

Query: 164 KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK---TPK 220
            R   + FL   Y I QA D       +   L   G DQ   I    ++  ++       
Sbjct: 122 ARSLPVGFL--AYPISQAADITA----FKAELVPVGDDQLPMIEQTNEIVHKMNSLTGEP 175

Query: 221 LFALTSPL------LTTASGT-KMGKTLSGAIWLNK 249
           +      L      L    G  KM K+L   + L+ 
Sbjct: 176 VLRHCKALLSEVSRLPGVDGNAKMSKSLGNTLTLSA 211


>gi|269929097|ref|YP_003321418.1| tryptophanyl-tRNA synthetase [Sphaerobacter thermophilus DSM 20745]
 gi|269788454|gb|ACZ40596.1| tryptophanyl-tRNA synthetase [Sphaerobacter thermophilus DSM 20745]
          Length = 348

 Score = 44.4 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 48/325 (14%), Positives = 94/325 (28%), Gaps = 58/325 (17%)

Query: 17  FIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMG 75
            + Q +          Q     + G   T   +H G+    +      Q        ++ 
Sbjct: 1   MVEQATTASRETADAPQQRPRVFSGIQPTGG-IHIGNYLGAIRNWVRQQDDYDNVFCIVD 59

Query: 76  GGTSIIGDPSFRDESRRM-MRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCS 134
                I        +R + + S  +   I+  + I             A +         
Sbjct: 60  LHAMTIPYDPADLRARNLELASVLLAAGIDPARSILFIQSDVREHTELAWI--------- 110

Query: 135 IKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCR 194
                 L  + ++  + RM      + + K  + +      Y +LQA D +     YD  
Sbjct: 111 ------LGTLATYGELRRMTQ---FKEKSKGSERVGAGILFYPVLQAADILL----YDAA 157

Query: 195 LQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLT---TASG----------TKMGKTL 241
           L   G DQ  +I    D+  R      F  T  +       +G           KM K+ 
Sbjct: 158 LVPVGEDQKQHIELTRDVAIRFNNT--FGETFVVPDADIKEAGARIMSLQDPTKKMSKSD 215

Query: 242 SGAIWLNKEMTSPYNFWQYWRN-IDD---------------ADVVSFAKRLTTLPMSEID 285
                  +   SP    +  R  + D               +++++     + +P+ E++
Sbjct: 216 PDPNSRIELRDSPDVIRRKIRRAVTDSGTEIRFDEEGKPAISNLLTIYHLFSDIPIPELE 275

Query: 286 RMAKLQGKEINEAKKIIATEITTMV 310
                 GK     K+ +A  I   +
Sbjct: 276 ERYV--GKGYGTFKQDLAEVIVEHL 298


>gi|56962056|ref|YP_173778.1| tryptophanyl-tRNA synthetase [Bacillus clausii KSM-K16]
 gi|56908290|dbj|BAD62817.1| tryptophanyl-tRNA synthetase [Bacillus clausii KSM-K16]
          Length = 329

 Score = 44.4 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 33/223 (14%), Positives = 70/223 (31%), Gaps = 34/223 (15%)

Query: 41  GYDLTASSLHAGHLTQLML--LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQE 98
           G   T   +H G+    +   L + ++ G +    +     +           ++  S+E
Sbjct: 8   GIKPTGE-VHLGNYIGAIKPALTFAKQPGLESFYFIANAHGLT----------KITDSEE 56

Query: 99  IQENIEKIKGI-----FSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRM 153
           +++    I                  ++D   +   +WL +      L      +     
Sbjct: 57  MRQLTRGIAATWLALGLDPDKSVFYRQSDVPEVFELSWLLACMAPKGLLNRAHAYKAAVD 116

Query: 154 LSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLG 213
            +  + +   + +  ++   F Y IL A D + L +     +   G DQ  +I    D+ 
Sbjct: 117 ENKAAGK---EADAGVNMGLFTYPILMAADIL-LFQPDVVPV---GRDQIQHIEIARDVA 169

Query: 214 ERLK--------TPKLFALTSP-LLTTASGTKMGKTLSGAIWL 247
            +           P +       +L    G KM K+    I L
Sbjct: 170 RQFNHIFGDVFKQPHVHIEEKVAVLPGLDGRKMSKSYGNTIPL 212


>gi|325914516|ref|ZP_08176860.1| tryptophanyl-tRNA synthetase [Xanthomonas vesicatoria ATCC 35937]
 gi|325539286|gb|EGD10938.1| tryptophanyl-tRNA synthetase [Xanthomonas vesicatoria ATCC 35937]
          Length = 429

 Score = 44.4 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 21/96 (21%), Positives = 33/96 (34%), Gaps = 18/96 (18%)

Query: 164 KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFA 223
             +  +S   F Y +L A D + +   +   +   G DQ  +I    D  +R     ++ 
Sbjct: 124 DDDAGVSAGLFMYPVLMAADIL-IFNAHKVPV---GRDQIQHIEMARDFAQRFN--HVYG 177

Query: 224 ---LTSP---------LLTTASGTKMGKTLSGAIWL 247
               T P          L    G KM K+    I L
Sbjct: 178 RDFFTLPDAVIDEQVSTLPGLDGRKMSKSYGNTIPL 213


>gi|290512758|ref|ZP_06552124.1| tryptophanyl-tRNA synthetase [Klebsiella sp. 1_1_55]
 gi|289775099|gb|EFD83101.1| tryptophanyl-tRNA synthetase [Klebsiella sp. 1_1_55]
          Length = 335

 Score = 44.4 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 35/216 (16%), Positives = 62/216 (28%), Gaps = 27/216 (12%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
            T   LH GH    +      +  H+   L+     +       D        +     +
Sbjct: 13  PTGQ-LHLGHYVGSLRQRVALQHDHQQFILIADLQGL------TDNGSNPQ--KISHHIL 63

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL 163
           E +    +  I      T   + +    L  +  + +     +    N  +  E  +   
Sbjct: 64  EVMADYLAVGID--PRLTTICLQSALPALAELSALYMNIVTVARVERNPTVKNEIAQKGF 121

Query: 164 KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK---TPK 220
            R   + FL   Y I QA D       +   L   G DQ   I    ++  ++       
Sbjct: 122 ARSLPVGFL--AYPISQAADITA----FKAELVPVGDDQLPMIEQTNEIVHKMNSLTGEP 175

Query: 221 LFALTSPL------LTTASGT-KMGKTLSGAIWLNK 249
           +      L      L    G  KM K+L   + L+ 
Sbjct: 176 VLRHCKALLSEVSRLPGVDGNAKMSKSLGNTLTLSA 211


>gi|206580076|ref|YP_002240675.1| tryptophanyl-tRNA synthetase [Klebsiella pneumoniae 342]
 gi|206569134|gb|ACI10910.1| tryptophanyl-tRNA synthetase [Klebsiella pneumoniae 342]
          Length = 335

 Score = 44.4 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 35/216 (16%), Positives = 62/216 (28%), Gaps = 27/216 (12%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
            T   LH GH    +      +  H+   L+     +       D        +     +
Sbjct: 13  PTGQ-LHLGHYVGSLRQRVALQHDHQQFILIADLQGL------TDNGSNPQ--KISHHIL 63

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL 163
           E +    +  I      T   + +    L  +  + +     +    N  +  E  +   
Sbjct: 64  EVMADYLAVGID--PRLTTICLQSALPALAELSALYMNIVTVARVERNPTVKNEIAQKGF 121

Query: 164 KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK---TPK 220
            R   + FL   Y I QA D       +   L   G DQ   I    ++  ++       
Sbjct: 122 ARSLPVGFL--AYPISQAADITA----FKAELVPVGDDQLPMIEQTNEIVHKMNSLTGEP 175

Query: 221 LFALTSPL------LTTASGT-KMGKTLSGAIWLNK 249
           +      L      L    G  KM K+L   + L+ 
Sbjct: 176 VLRHCKALLSEVSRLPGVDGNAKMSKSLGNTLTLSA 211


>gi|298480189|ref|ZP_06998387.1| ribosomal large subunit pseudouridine synthase B [Bacteroides sp.
           D22]
 gi|298273470|gb|EFI15033.1| ribosomal large subunit pseudouridine synthase B [Bacteroides sp.
           D22]
          Length = 495

 Score = 44.4 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 12/71 (16%), Positives = 31/71 (43%), Gaps = 1/71 (1%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           + +  + L   +  AG   S  EA   + +  + +N  +++    +IK  D     +  +
Sbjct: 255 DPNEPIRLNKFLANAGVC-SRREADEFITAGVVSVNGEVVTELGTKIKRSDVVKFHDEPV 313

Query: 405 SFGKKNHIICH 415
           S  +K +++ +
Sbjct: 314 SIERKVYVLLN 324


>gi|293369516|ref|ZP_06616095.1| pseudouridylate synthase [Bacteroides ovatus SD CMC 3f]
 gi|292635401|gb|EFF53914.1| pseudouridylate synthase [Bacteroides ovatus SD CMC 3f]
          Length = 485

 Score = 44.4 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 12/71 (16%), Positives = 31/71 (43%), Gaps = 1/71 (1%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           + +  + L   +  AG   S  EA   + +  + +N  +++    +IK  D     +  +
Sbjct: 245 DPNEPIRLNKFLANAGVC-SRREADEFITAGVVSVNGEVVTELGTKIKRSDVVKFHDEPV 303

Query: 405 SFGKKNHIICH 415
           S  +K +++ +
Sbjct: 304 SIERKVYVLLN 314


>gi|262408169|ref|ZP_06084716.1| ribosomal large subunit pseudouridine synthase B [Bacteroides sp.
           2_1_22]
 gi|262353721|gb|EEZ02814.1| ribosomal large subunit pseudouridine synthase B [Bacteroides sp.
           2_1_22]
          Length = 495

 Score = 44.4 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 12/71 (16%), Positives = 31/71 (43%), Gaps = 1/71 (1%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           + +  + L   +  AG   S  EA   + +  + +N  +++    +IK  D     +  +
Sbjct: 255 DPNEPIRLNKFLANAGVC-SRREADEFITAGVVSVNGEVVTELGTKIKRSDVVKFHDEPV 313

Query: 405 SFGKKNHIICH 415
           S  +K +++ +
Sbjct: 314 SIERKVYVLLN 324


>gi|260171988|ref|ZP_05758400.1| ribosomal large subunit pseudouridine synthase B [Bacteroides sp.
           D2]
 gi|315920300|ref|ZP_07916540.1| ribosomal large subunit pseudouridine synthase B [Bacteroides sp.
           D2]
 gi|313694175|gb|EFS31010.1| ribosomal large subunit pseudouridine synthase B [Bacteroides sp.
           D2]
          Length = 482

 Score = 44.4 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 12/71 (16%), Positives = 31/71 (43%), Gaps = 1/71 (1%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           + +  + L   +  AG   S  EA   + +  + +N  +++    +IK  D     +  +
Sbjct: 242 DPNEPIRLNKFLANAGVC-SRREADEFITAGVVSVNGEVVTELGTKIKRSDVVKFHDEPV 300

Query: 405 SFGKKNHIICH 415
           S  +K +++ +
Sbjct: 301 SIERKVYVLLN 311


>gi|237719081|ref|ZP_04549562.1| ribosomal large subunit pseudouridine synthase B [Bacteroides sp.
           2_2_4]
 gi|229451460|gb|EEO57251.1| ribosomal large subunit pseudouridine synthase B [Bacteroides sp.
           2_2_4]
          Length = 493

 Score = 44.4 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 12/71 (16%), Positives = 31/71 (43%), Gaps = 1/71 (1%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           + +  + L   +  AG   S  EA   + +  + +N  +++    +IK  D     +  +
Sbjct: 253 DPNEPIRLNKFLANAGVC-SRREADEFITAGVVSVNGEVVTELGTKIKRSDVVKFHDEPV 311

Query: 405 SFGKKNHIICH 415
           S  +K +++ +
Sbjct: 312 SIERKVYVLLN 322


>gi|153809092|ref|ZP_01961760.1| hypothetical protein BACCAC_03402 [Bacteroides caccae ATCC 43185]
 gi|149128425|gb|EDM19644.1| hypothetical protein BACCAC_03402 [Bacteroides caccae ATCC 43185]
          Length = 494

 Score = 44.4 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 12/71 (16%), Positives = 31/71 (43%), Gaps = 1/71 (1%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           + +  + L   +  AG   S  EA   + +  + +N  +++    +IK  D     +  +
Sbjct: 254 DPNEPIRLNKFLANAGVC-SRREADEFITAGVVSVNGEVVTELGTKIKRSDVVKFHDEPV 312

Query: 405 SFGKKNHIICH 415
           S  +K +++ +
Sbjct: 313 SIERKVYVLLN 323


>gi|29349280|ref|NP_812783.1| ribosomal large subunit pseudouridine synthase B [Bacteroides
           thetaiotaomicron VPI-5482]
 gi|253570374|ref|ZP_04847783.1| ribosomal large subunit pseudouridine synthase B [Bacteroides sp.
           1_1_6]
 gi|298384818|ref|ZP_06994377.1| ribosomal large subunit pseudouridine synthase B [Bacteroides sp.
           1_1_14]
 gi|29341188|gb|AAO78977.1| ribosomal large subunit pseudouridine synthase B [Bacteroides
           thetaiotaomicron VPI-5482]
 gi|251840755|gb|EES68837.1| ribosomal large subunit pseudouridine synthase B [Bacteroides sp.
           1_1_6]
 gi|298261962|gb|EFI04827.1| ribosomal large subunit pseudouridine synthase B [Bacteroides sp.
           1_1_14]
          Length = 496

 Score = 44.4 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 12/71 (16%), Positives = 31/71 (43%), Gaps = 1/71 (1%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           + +  + L   +  AG   S  EA   + +  + +N  +++    +IK  D     +  +
Sbjct: 256 DPNEPIRLNKFLANAGVC-SRREADEFITAGVVSVNGEVVTELGTKIKRSDVVKFHDEPV 314

Query: 405 SFGKKNHIICH 415
           S  +K +++ +
Sbjct: 315 SIERKVYVLLN 325


>gi|308234869|ref|ZP_07665606.1| tryptophanyl-tRNA synthetase [Gardnerella vaginalis ATCC 14018]
          Length = 363

 Score = 44.4 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 35/256 (13%), Positives = 75/256 (29%), Gaps = 42/256 (16%)

Query: 22  SNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSI 80
           S+     +  +    T   G   T   LH GH    +     +Q  G     ++      
Sbjct: 25  SDATLEKLKANPSSFTMLTGDRPTGR-LHLGHYFGSIRERVAMQNLGVNTNVIIADY--- 80

Query: 81  IGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY----GTGKTDALMLNNETWLCSIK 136
                      +++  ++  E++E    + +  + Y       K   +  ++     +  
Sbjct: 81  -----------QVITDRDTVEHVE--DNVLNLVLDYMAAGIDPKKTMIFTHSAVPAENQL 127

Query: 137 YIDLLREIGSFFSVNRMLSFESVRSRLK-REQSLSFLEFNYMILQAYDFVELAKNYDCRL 195
            +  L  +             +V++ ++    +L+ L   Y + QA D   L    +   
Sbjct: 128 MLPFLSLVTEAELHRNP----TVKAEMEASGHALTGLLLTYPVHQACD--ILFCKANVV- 180

Query: 196 QMGGSDQWGNIICGIDLGERLKT----------PKLFALT-SPLLTTASGTKMGKTLSGA 244
              G D   +I     +  R                  L+ +P +    G KM K+   +
Sbjct: 181 -PIGKDNLPHIEITRTIARRFNERYAKKNPVFPEPAAILSDTPEIPGLDGRKMSKSYGNS 239

Query: 245 IWLNKEMTSPYNFWQY 260
           I L           + 
Sbjct: 240 IMLGATAEETAKLIKK 255


>gi|312194497|ref|YP_004014558.1| tryptophanyl-tRNA synthetase [Frankia sp. EuI1c]
 gi|311225833|gb|ADP78688.1| tryptophanyl-tRNA synthetase [Frankia sp. EuI1c]
          Length = 349

 Score = 44.4 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 20/95 (21%), Positives = 35/95 (36%), Gaps = 17/95 (17%)

Query: 166 EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKLFA 223
           +  ++   FNY +L A D + +  +    +   G DQ  ++    D+          ++A
Sbjct: 137 DAGINMGLFNYPVLMAVDILIMNAD----VVPVGQDQVQHLEIAADVAGSFNHLFGDVYA 192

Query: 224 LTSP-----------LLTTASGTKMGKTLSGAIWL 247
           L  P           +L    G KM K+    I L
Sbjct: 193 LKIPEAVTPPGDTGRVLPGLDGRKMSKSYGNTIPL 227


>gi|325111065|ref|YP_004272133.1| tryptophanyl-tRNA synthetase [Planctomyces brasiliensis DSM 5305]
 gi|324971333|gb|ADY62111.1| tryptophanyl-tRNA synthetase [Planctomyces brasiliensis DSM 5305]
          Length = 322

 Score = 44.4 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 33/176 (18%), Positives = 53/176 (30%), Gaps = 34/176 (19%)

Query: 174 FNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL-GERLKTPKLFALTSP----- 227
           F Y +L A D +     YD  +   G+DQ  +I    DL        +      P     
Sbjct: 122 FTYPVLMAADILL----YDSEVVPVGTDQVQHIEVTRDLGQRFNHLYEQEVFVLPNARVL 177

Query: 228 ----LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNI--DDAD------------V 269
                +    G KM K+ +  I    E+  P    +   N    D+             V
Sbjct: 178 DESAKVPGTDGEKMSKSYNNTI----EIFPPEKKLKKKINSIKTDSLAVEDPKNPETCPV 233

Query: 270 VSFAKRLTTLP-MSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAM 324
            +  K   +      +    +  G    EAKK++         G   A++    A 
Sbjct: 234 FALYKLFASKSDQDALADRYRAGGMGYGEAKKLVLEGALDHF-GAARAKREELEAR 288


>gi|258543615|ref|YP_003189048.1| tRNA/rRNA pseudouridine synthase [Acetobacter pasteurianus IFO
           3283-01]
 gi|256634693|dbj|BAI00669.1| tRNA/rRNA pseudouridine synthase [Acetobacter pasteurianus IFO
           3283-01]
 gi|256637749|dbj|BAI03718.1| tRNA/rRNA pseudouridine synthase [Acetobacter pasteurianus IFO
           3283-03]
 gi|256640803|dbj|BAI06765.1| tRNA/rRNA pseudouridine synthase [Acetobacter pasteurianus IFO
           3283-07]
 gi|256643858|dbj|BAI09813.1| tRNA/rRNA pseudouridine synthase [Acetobacter pasteurianus IFO
           3283-22]
 gi|256646913|dbj|BAI12861.1| tRNA/rRNA pseudouridine synthase [Acetobacter pasteurianus IFO
           3283-26]
 gi|256649966|dbj|BAI15907.1| tRNA/rRNA pseudouridine synthase [Acetobacter pasteurianus IFO
           3283-32]
 gi|256652956|dbj|BAI18890.1| tRNA/rRNA pseudouridine synthase [Acetobacter pasteurianus IFO
           3283-01-42C]
 gi|256656010|dbj|BAI21937.1| tRNA/rRNA pseudouridine synthase [Acetobacter pasteurianus IFO
           3283-12]
          Length = 258

 Score = 44.4 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 10/49 (20%), Positives = 23/49 (46%), Gaps = 1/49 (2%)

Query: 348 RGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
           RG  +   + ++G   S  +A R ++ N I++N   +++    +   D 
Sbjct: 6   RGERIAKWLARSG-VASRRDAERMIEENRIRLNGQPVTHPATFVTNGDI 53


>gi|296109382|ref|YP_003616331.1| ribosomal protein S4 [Methanocaldococcus infernus ME]
 gi|295434196|gb|ADG13367.1| ribosomal protein S4 [Methanocaldococcus infernus ME]
          Length = 183

 Score = 44.4 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 19/114 (16%), Positives = 43/114 (37%), Gaps = 8/114 (7%)

Query: 293 KEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGM-- 350
           ++     + + ++ T      + A++A           I  +  PT+          +  
Sbjct: 50  RKYRRQARRLISDTT-----EQGAKEAQQLFNVLRRYGILRKDNPTLDDVLALTVEDILE 104

Query: 351 -GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
             L TL+ + G A +  +AR+ +    I IN   ++     + +++ DS    K
Sbjct: 105 RRLQTLVFRKGLARTPRQARQLIVHGHIAINGRRVTVPSYLVTVEEEDSIDYYK 158


>gi|298374390|ref|ZP_06984348.1| tryptophan--tRNA ligase [Bacteroides sp. 3_1_19]
 gi|298268758|gb|EFI10413.1| tryptophan--tRNA ligase [Bacteroides sp. 3_1_19]
          Length = 350

 Score = 44.4 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 46/308 (14%), Positives = 89/308 (28%), Gaps = 50/308 (16%)

Query: 41  GYDLTASSLHAGHLTQLML-LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           G   T + LH G+    +     +Q   +     +    S+   P   D  R  +++   
Sbjct: 7   GIRPTGN-LHLGNYFGAVKSFLRMQDE-YNCFFFIADWHSLTTHPHP-DNIRNSVKTILS 63

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALM---LN-NETWLCSIKYIDLLREIGSFFSVNRM-- 153
           +     I    ++            +   LN N      ++      +      ++R   
Sbjct: 64  EYLACGIDPEKATIYIQSDVPEVVELYLYLNMNAGIGELMRTASFKDKARQQLHISREGC 123

Query: 154 ---LSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGI 210
              +  E        + S+S     Y  L A D + + K     +   G DQ  N+    
Sbjct: 124 EGDVEKEIFNE--GNKHSVSAGLLTYPTLMAAD-IIIHKALKVPV---GKDQEQNMEMAR 177

Query: 211 DLGERLKTPKLFAL-----TSPL------LTTASGT-KMGKTLSGAIWLNKEMTSPYNFW 258
               R  +           +  L      +    G+ KMGK+   AI+L  +  +     
Sbjct: 178 RFARRFNSTYGVDFFPEPASFHLGNKSVKVPGLDGSGKMGKSEGNAIYLIDDEKT---IK 234

Query: 259 QYWRN-IDDA--------DVVSFAKRLTTLPMSEIDRMAKLQGKEIN-------EAKKII 302
           +     + DA             A   T + +           ++ N       + KK +
Sbjct: 235 KKVMKAVSDAGPTEPNSVKPEPIANLFTMMEIVSEKETYDFFNEKYNNCEIRYGDMKKQL 294

Query: 303 ATEITTMV 310
           A +I    
Sbjct: 295 AEDINKFC 302


>gi|254570521|ref|XP_002492370.1| Cytoplasmic tryptophanyl-tRNA synthetase, aminoacylates
           tryptophanyl-tRNA [Pichia pastoris GS115]
 gi|238032168|emb|CAY70123.1| Cytoplasmic tryptophanyl-tRNA synthetase, aminoacylates
           tryptophanyl-tRNA [Pichia pastoris GS115]
 gi|328353615|emb|CCA40013.1| tryptophanyl-tRNA synthetase [Pichia pastoris CBS 7435]
          Length = 407

 Score = 44.4 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 23/131 (17%), Positives = 49/131 (37%), Gaps = 16/131 (12%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
            SER F       + LD+   +     Y G   ++ S+H GH+   +   WLQ     P+
Sbjct: 79  FSERDF------GKILDLYEKKQPFFLYTGRGPSSDSMHLGHMVPFIFTKWLQDVFDVPL 132

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            +      +  D  F  +    +  +++++  +         I  G       + +N  +
Sbjct: 133 VI-----QLTDDEKFLFK--PKLTIEDVKQFSK---DNAKDIIAVGFDPKKTFIFSNLEY 182

Query: 132 LCSIKYIDLLR 142
           +    Y +++R
Sbjct: 183 ISGGFYENVVR 193


>gi|171473733|gb|ACB47039.1| putative tryptophanyl-tRNA synthetase [Micromonospora chersina]
          Length = 352

 Score = 44.4 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 35/217 (16%), Positives = 73/217 (33%), Gaps = 25/217 (11%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
            T   LH GH    +    ++   H     +      I D      +R     ++I++  
Sbjct: 12  PTGR-LHLGHYVGSIA-NRVKLHQHYESFFI------IADLHM-LTTRN--SREDIEQVS 60

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL 163
              + + +  +  G     A                L + + +   + R+ S +   SR 
Sbjct: 61  HNAREMVTDILAAGVEPDRATFYLQSAIPEVGDLNTLFQNLVTVPRLERVPSLKE-MSRD 119

Query: 164 KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT----- 218
             ++ + +    Y +LQA D + +       + +G  D   ++    ++  R        
Sbjct: 120 AGKEEMPYGLLGYPVLQAADILCVK---GQVVPVG-KDNAAHVEVTREIARRFNHLYGEV 175

Query: 219 ---PKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEM 251
              P++    +P L    G  KM K+   AI L+ + 
Sbjct: 176 FPVPEMIMSETPTLVGTDGAGKMSKSKGNAIALSDDP 212


>gi|150010033|ref|YP_001304776.1| tryptophanyl-tRNA synthetase [Parabacteroides distasonis ATCC 8503]
 gi|149938457|gb|ABR45154.1| tryptophanyl-tRNA synthetase [Parabacteroides distasonis ATCC 8503]
          Length = 350

 Score = 44.4 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 46/308 (14%), Positives = 89/308 (28%), Gaps = 50/308 (16%)

Query: 41  GYDLTASSLHAGHLTQLML-LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           G   T + LH G+    +     +Q   +     +    S+   P   D  R  +++   
Sbjct: 7   GIRPTGN-LHLGNYFGAVKSFLRMQDE-YNCFFFIADWHSLTTHPHP-DNIRNSVKTILS 63

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALM---LN-NETWLCSIKYIDLLREIGSFFSVNRM-- 153
           +     I    ++            +   LN N      ++      +      ++R   
Sbjct: 64  EYLACGIDPEKATIYIQSDVPEVVELYLYLNMNAGIGELMRTASFKDKARQQLHISREGC 123

Query: 154 ---LSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGI 210
              +  E        + S+S     Y  L A D + + K     +   G DQ  N+    
Sbjct: 124 EGDVEKEIFNE--GNKHSVSAGLLTYPTLMAAD-IIIHKALKVPV---GKDQEQNMEMAR 177

Query: 211 DLGERLKTPKLFAL-----TSPL------LTTASGT-KMGKTLSGAIWLNKEMTSPYNFW 258
               R  +           +  L      +    G+ KMGK+   AI+L  +  +     
Sbjct: 178 RFARRFNSTYGVDFFPEPASFHLGNKSVKVPGLDGSGKMGKSEGNAIYLIDDEKT---IK 234

Query: 259 QYWRN-IDDA--------DVVSFAKRLTTLPMSEIDRMAKLQGKEIN-------EAKKII 302
           +     + DA             A   T + +           ++ N       + KK +
Sbjct: 235 KKVMKAVSDAGPTEPNSVKPEPIANLFTMMEIVSEKETYDFFNEKYNNCEIRYGDMKKQL 294

Query: 303 ATEITTMV 310
           A +I    
Sbjct: 295 AEDINKFC 302


>gi|55436|emb|CAA49347.1| tryptophan--tRNA ligase [Mus musculus]
          Length = 475

 Score = 44.4 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 39/248 (15%), Positives = 85/248 (34%), Gaps = 31/248 (12%)

Query: 15  RGFIHQISN-PRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +  + LD   ++     Y G   ++ ++H GHL   +   WL+   + P+ +
Sbjct: 138 RGIFFSHRDMNQILDAYENKKPFYLYTGRGPSSEAMHLGHLVPFIFTKWLEDVFNVPLVI 197

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                         D+ + + +   +++            I  G       + ++  ++ 
Sbjct: 198 -----------QMSDDEKYLWKDLTLEQAYSYTVENAKDIIACGFDINKTFIFSDLEYMG 246

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA-----YDFVELA 188
                   R +     + + ++F  V+       S    + ++  +QA       F ++ 
Sbjct: 247 Q--SPGFYRNV---VKIQKHVTFNQVKGIFGFTDSDCIGKSSFPAVQAAPSFSNSFPKIF 301

Query: 189 K---NYDCRLQMGGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTASGTKMGKTLS 242
           +   +  C +     DQ        D+  R+  PK   L +   P L  A  TKM  +  
Sbjct: 302 RDRTDIQCLIPC-AIDQDPYFRMTRDVAPRIGHPKPALLHSTFFPALQGAQ-TKMSASDP 359

Query: 243 G-AIWLNK 249
             +I+L  
Sbjct: 360 NSSIFLTD 367


>gi|296120097|ref|ZP_06838651.1| tryptophan--tRNA ligase [Corynebacterium ammoniagenes DSM 20306]
 gi|295967251|gb|EFG80522.1| tryptophan--tRNA ligase [Corynebacterium ammoniagenes DSM 20306]
          Length = 350

 Score = 44.4 bits (104), Expect = 0.033,   Method: Composition-based stats.
 Identities = 44/253 (17%), Positives = 82/253 (32%), Gaps = 43/253 (16%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   TA S H G+    +  +   + G      +    +I  D              E++
Sbjct: 23  GIQPTADSYHLGNYLGALKQWIDLQDGFDAFYFIPDLHAITVD----------QDPAELR 72

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           E          +       ++   + +       + +  +L+ +  F   +RM  F+   
Sbjct: 73  ERTIAGAAQLIALG-IDPKRSTLYVQSQVPAHAELTW--VLQCMTGFGEASRMTQFKDKS 129

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL---- 216
           +R   +   S   F Y +L A D + L       +   G DQ  ++    +L ER     
Sbjct: 130 AR-HGQDRTSVGLFTYPVLMAADIL-LYSPDFVPV---GEDQRQHLELTRNLAERFNSRF 184

Query: 217 -------------KTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
                         + K++ L  P        KM K+      L   + +P    +  R+
Sbjct: 185 GETFRVPEAYIPQGSAKIYDLQDPT------AKMSKSGPNPKGLINLLDAPKTSAKRIRS 238

Query: 264 --IDDADVVSFAK 274
              DD  VV+F +
Sbjct: 239 AVTDDLGVVNFDR 251


>gi|66770308|ref|YP_245070.1| tryptophanyl-tRNA synthetase [Xanthomonas campestris pv. campestris
           str. 8004]
 gi|66575640|gb|AAY51050.1| tryptophanyl-tRNA synthetase [Xanthomonas campestris pv. campestris
           str. 8004]
          Length = 431

 Score = 44.4 bits (104), Expect = 0.033,   Method: Composition-based stats.
 Identities = 19/94 (20%), Positives = 30/94 (31%), Gaps = 14/94 (14%)

Query: 164 KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL-GERLKTPKLF 222
             +  ++   F Y +L A D + +   +   +   G DQ  +I    D            
Sbjct: 126 DEDAGVTAGLFMYPVLMAADIL-IFNAHKVPV---GRDQIQHIEMARDFAQRFNHMYGQD 181

Query: 223 ALTSP---------LLTTASGTKMGKTLSGAIWL 247
             T P          L    G KM K+ +  I L
Sbjct: 182 YFTLPDAVIDEQVATLPGLDGRKMSKSYNNTIPL 215


>gi|150015684|ref|YP_001307938.1| tryptophanyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052]
 gi|149902149|gb|ABR32982.1| tryptophanyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052]
          Length = 339

 Score = 44.4 bits (104), Expect = 0.033,   Method: Composition-based stats.
 Identities = 35/234 (14%), Positives = 73/234 (31%), Gaps = 33/234 (14%)

Query: 44  LTASSLHAGHLTQLMLLFW-LQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     LQ++G ++   ++    ++  +    ++ R  +    +  
Sbjct: 12  PTGK-LHIGHYIGSLKNRVVLQESGLYESFIMIADQQALTDNARNPEKIRNSLTEVALDY 70

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
               I             K++  + +    L  +    L     S    N  +  E  + 
Sbjct: 71  LAVGI----------DPSKSNIFVQSQIPELNELTMHYLNLVTLSRLERNPTVKQEIKQK 120

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKL 221
             +      FL   Y + QA D      +    + +G  DQ   I    ++     +   
Sbjct: 121 NFENSIPAGFL--IYPVSQAADITAFKAD---TVPVG-EDQLPMIEQTREIVRSFNSIYG 174

Query: 222 FALTSP-----------LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNI 264
             L  P           L  T    KM K++   I+L+ +  +     +   ++
Sbjct: 175 EVLVEPEAVLPSSNAGRLPGTDGKAKMSKSIGNCIYLSDDADT---IKKKVMSM 225


>gi|326479174|gb|EGE03184.1| tryptophanyl-tRNA synthetase [Trichophyton equinum CBS 127.97]
          Length = 446

 Score = 44.4 bits (104), Expect = 0.033,   Method: Composition-based stats.
 Identities = 15/61 (24%), Positives = 23/61 (37%), Gaps = 1/61 (1%)

Query: 15  RGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +  + LD          Y G   ++ +LH GH   L    WLQ     P+ +
Sbjct: 80  RGLFFSHRDFDKILDKYEKGEPFFLYTGRGPSSDALHLGHTIPLTFTKWLQDVFDVPLGI 139

Query: 74  M 74
           +
Sbjct: 140 L 140


>gi|256838843|ref|ZP_05544353.1| tryptophanyl-tRNA synthetase [Parabacteroides sp. D13]
 gi|262382662|ref|ZP_06075799.1| tryptophanyl-tRNA synthetase [Bacteroides sp. 2_1_33B]
 gi|301308063|ref|ZP_07214017.1| tryptophan--tRNA ligase [Bacteroides sp. 20_3]
 gi|256739762|gb|EEU53086.1| tryptophanyl-tRNA synthetase [Parabacteroides sp. D13]
 gi|262295540|gb|EEY83471.1| tryptophanyl-tRNA synthetase [Bacteroides sp. 2_1_33B]
 gi|300833533|gb|EFK64149.1| tryptophan--tRNA ligase [Bacteroides sp. 20_3]
          Length = 350

 Score = 44.4 bits (104), Expect = 0.033,   Method: Composition-based stats.
 Identities = 46/308 (14%), Positives = 89/308 (28%), Gaps = 50/308 (16%)

Query: 41  GYDLTASSLHAGHLTQLML-LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           G   T + LH G+    +     +Q   +     +    S+   P   D  R  +++   
Sbjct: 7   GIRPTGN-LHLGNYFGAVKSFLRMQDE-YNCFFFIADWHSLTTHPHP-DNIRNSVKTILS 63

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALM---LN-NETWLCSIKYIDLLREIGSFFSVNRM-- 153
           +     I    ++            +   LN N      ++      +      ++R   
Sbjct: 64  EYLACGIDPEKATIYIQSDVPEVVELYLYLNMNAGIGELMRTASFKDKARQQLHISREGC 123

Query: 154 ---LSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGI 210
              +  E        + S+S     Y  L A D + + K     +   G DQ  N+    
Sbjct: 124 EGDVEKEIFNE--GNKHSVSAGLLTYPTLMAAD-IIIHKALKVPV---GKDQEQNMEMAR 177

Query: 211 DLGERLKTPKLFAL-----TSPL------LTTASGT-KMGKTLSGAIWLNKEMTSPYNFW 258
               R  +           +  L      +    G+ KMGK+   AI+L  +  +     
Sbjct: 178 RFARRFNSTYGVDFFPEPASFHLGDKSVKVPGLDGSGKMGKSEGNAIYLIDDEKT---IK 234

Query: 259 QYWRN-IDDA--------DVVSFAKRLTTLPMSEIDRMAKLQGKEIN-------EAKKII 302
           +     + DA             A   T + +           ++ N       + KK +
Sbjct: 235 KKVMKAVSDAGPTEPNSVKPEPIANLFTMMEIVSEKETYDFFNEKYNNCEIRYGDMKKQL 294

Query: 303 ATEITTMV 310
           A +I    
Sbjct: 295 AEDINKFC 302


>gi|121535748|ref|ZP_01667550.1| tryptophanyl-tRNA synthetase [Thermosinus carboxydivorans Nor1]
 gi|121305647|gb|EAX46587.1| tryptophanyl-tRNA synthetase [Thermosinus carboxydivorans Nor1]
          Length = 329

 Score = 44.4 bits (104), Expect = 0.033,   Method: Composition-based stats.
 Identities = 33/170 (19%), Positives = 53/170 (31%), Gaps = 33/170 (19%)

Query: 176 YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT-------PKLFALT-SP 227
           Y  L   D + L K     +   G DQ  ++    ++  R               L+ +P
Sbjct: 133 YPELMTAD-IILYKADTVPV---GEDQLPHLELCREIVRRFNHLYGEVFPEPQAKLSQAP 188

Query: 228 LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNI--------------DDA-DVVSF 272
           LL    G KM K+    I       SP +     R +               D   V +F
Sbjct: 189 LLPGIDGRKMSKSYGNEI---PFAASPEDLRARVRLMVTDPQRVKKTDPGNPDVCTVHTF 245

Query: 273 AKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT---TMVHGREEAEKA 319
            K  +   + EI    +       + KK +A  +      +H R    +A
Sbjct: 246 HKIFSRDELDEIVMSCRNAAIGCVDCKKRLAERMVSALADIHVRRAELEA 295


>gi|302519518|ref|ZP_07271860.1| tryptophanyl-tRNA synthetase [Streptomyces sp. SPB78]
 gi|302428413|gb|EFL00229.1| tryptophanyl-tRNA synthetase [Streptomyces sp. SPB78]
          Length = 337

 Score = 44.4 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 49/306 (16%), Positives = 94/306 (30%), Gaps = 45/306 (14%)

Query: 31  CSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDES 90
            +        G   +A S H G+    +  +   +  H    ++    + I  P   D  
Sbjct: 1   MASERSRVLSGIQPSAGSFHLGNYLGAVRQWVALQESHDAFYMVVDMHA-ITVPQDPDTL 59

Query: 91  RRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSV 150
           R   R    Q     I    S+       +  A +     W        ++  +  F   
Sbjct: 60  RANTRLSAAQLLAAGIDPERSALFVQSHVREHAELA----W--------IMNCLTGFGEA 107

Query: 151 NRMLS-FESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICG 209
           +RM    +    +     ++    F Y +LQ  D + L + +   +   G DQ  ++   
Sbjct: 108 SRMTQFKDKAAKQGAEGTTVGL--FTYPVLQVADIL-LYQAHQVPV---GEDQRQHVELT 161

Query: 210 IDLGERLKT--------PKLFAL--TSPLLTTAS-GTKMGKTLSGAIWLNKEMTSPYNFW 258
            DL ER           P+ + L  T+ +        KM K+ +    L   M  P    
Sbjct: 162 RDLAERFNARYGETFVVPEAYILKETAKIYDLQEPSAKMSKSAASPKGLVNLMDEPKATA 221

Query: 259 QYWRN-IDDAD------------VVSFAKRLTTLPMSEIDRMAKL-QGKEINEAKKIIAT 304
           +  ++ + D +            V +     + L    +  + +   GK     K  +A 
Sbjct: 222 KKIKSAVTDTETEIRFDRENKPGVSNLLGIYSNLTGVTVQALEEKYAGKGYGALKTDLAE 281

Query: 305 EITTMV 310
            +   V
Sbjct: 282 VVVDFV 287


>gi|296215896|ref|XP_002754330.1| PREDICTED: tryptophanyl-tRNA synthetase, cytoplasmic-like
           [Callithrix jacchus]
          Length = 474

 Score = 44.4 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 38/248 (15%), Positives = 81/248 (32%), Gaps = 31/248 (12%)

Query: 15  RGFIHQISN-PRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +  + LD   ++     Y G   ++ ++H GHL   +   WLQ   + P+ +
Sbjct: 137 RGIFFSHRDMNQVLDAYENKKPFYLYTGRGPSSEAMHVGHLIPFIFTKWLQDVFNVPLVI 196

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                         D+ + + +   + +            I  G       + ++  ++ 
Sbjct: 197 -----------QMTDDEKYLWKDLTLDQAYGYAVENAKDIIACGFDINKTFIFSDLDYMG 245

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA--------YDFV 185
                   + +     + + ++F  V+       S S  + ++  +QA            
Sbjct: 246 --MSPGFYKNV---VKIQKHVTFNQVKGIFGFTDSDSIGKISFPAIQAAPSFSNSFPQIF 300

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTASGTKMGKTLS 242
               +  C +     DQ        D+  ++  PK   L +   P L  A  TKM  +  
Sbjct: 301 GDRTDIQCLIPC-AIDQDPYFRMTRDVAPKIGYPKPALLHSTFFPALQGAQ-TKMSASDP 358

Query: 243 G-AIWLNK 249
             +I+L  
Sbjct: 359 NSSIFLTD 366


>gi|228469863|ref|ZP_04054802.1| tryptophan-tRNA ligase [Porphyromonas uenonis 60-3]
 gi|228308498|gb|EEK17286.1| tryptophan-tRNA ligase [Porphyromonas uenonis 60-3]
          Length = 331

 Score = 44.4 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 37/222 (16%), Positives = 70/222 (31%), Gaps = 32/222 (14%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   T   LH G+    M  F   +  +     +    S+   P        +  +  I 
Sbjct: 7   GIRPTG-HLHIGNYYGAMRSFLEMQEQYDCYFFIADWHSLTTHPHP---GDIVQDTDTIL 62

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
              E +             ++D   +        +     L E+    +          +
Sbjct: 63  --AEYLACGLDPSKVVLYRQSDVPEV--LELYLYLNMNAYLGELQRTTTFKE-------K 111

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT-- 218
           +R K+  +++     Y  L A D + L +     +   G DQ  N+        R  T  
Sbjct: 112 AR-KQPDNVNAGLLTYPTLMAADIL-LQRAVKVPV---GKDQEQNMEMARRFARRFNTIY 166

Query: 219 ------PKLF--ALTSPL-LTTASGT-KMGKTLSGAIWLNKE 250
                       A++ P+ +    G+ KMGK+   AI+L ++
Sbjct: 167 GVEYFTEPASWTAMSKPIKVPGLDGSGKMGKSEGNAIYLYED 208


>gi|114566930|ref|YP_754084.1| ribosomal large subunit pseudouridine synthaseB [Syntrophomonas
           wolfei subsp. wolfei str. Goettingen]
 gi|114337865|gb|ABI68713.1| ribosomal large subunit pseudouridine synthase B [Syntrophomonas
           wolfei subsp. wolfei str. Goettingen]
          Length = 239

 Score = 44.4 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 22/46 (47%), Gaps = 1/46 (2%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           M L   + ++G  +S  +A R +    +K+N+  I+     +K  D
Sbjct: 1   MRLAKYLAESGI-SSRRQAERLITQGKVKVNDKTITELAFTLKPGD 45


>gi|254514127|ref|ZP_05126188.1| tryptophanyl-tRNA synthetase [gamma proteobacterium NOR5-3]
 gi|219676370|gb|EED32735.1| tryptophanyl-tRNA synthetase [gamma proteobacterium NOR5-3]
          Length = 335

 Score = 44.4 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 35/165 (21%), Positives = 57/165 (34%), Gaps = 24/165 (14%)

Query: 174 FNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKLFAL------- 224
           F+Y +L A D + + +  D  +   G DQ  ++    D+ +R      +LF L       
Sbjct: 135 FSYPVLMAADIL-MFRAQDIPV---GRDQIQHVEMARDIAQRFNHHYDELFVLPEAQVDD 190

Query: 225 TSPLLTTASGTKMGKTLSGAI-WLNKEMTSPYNFW---------QYWRNIDDADVVSFAK 274
           T  +L    G KM K+    I   + E                    ++ +D+ V     
Sbjct: 191 TVAVLQGLDGRKMSKSYHNTIPLFDTEKRLKKAINKVKTNLLEPGEAKSTEDSTVFQLWS 250

Query: 275 RLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHG-REEAEK 318
                        A   G    E+KK +   I   + G REE E+
Sbjct: 251 AFADQAGIAAMEQAFADGIAWGESKKQLFELINEELRGPREEYER 295


>gi|196042800|ref|ZP_03110039.1| putative tryptophanyl-tRNA synthetase [Bacillus cereus 03BB108]
 gi|196026284|gb|EDX64952.1| putative tryptophanyl-tRNA synthetase [Bacillus cereus 03BB108]
          Length = 332

 Score = 44.4 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 48/159 (30%), Gaps = 25/159 (15%)

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLF 222
           L+ +  ++   + Y IL A D + L +     +   G DQ  +I    D+         F
Sbjct: 123 LEVDAGVNMGLYTYPILMAADIL-LFQATHVPV---GKDQIQHIEIARDIATYFN--HTF 176

Query: 223 ALTSPL-----------LTTASGTKMGKTLSGAIWL--NKEMTSPYNFWQYWRNIDDADV 269
            +T  L           L    G KM K+    I L   +E      F     +    + 
Sbjct: 177 GMTFTLPEYVIQEEGAILPGLDGRKMSKSYGNVIPLFAEQEKLRKLIFKIKTDSSLPNEP 236

Query: 270 VSFAKRLT----TLPMSEID--RMAKLQGKEINEAKKII 302
                  T         EI   R     G    + KK +
Sbjct: 237 KELETLFTIYKEFATEDEIHSLREKYETGIGWGDVKKEL 275


>gi|149044170|gb|EDL97552.1| rCG27710, isoform CRA_d [Rattus norvegicus]
          Length = 472

 Score = 44.4 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 50/345 (14%), Positives = 104/345 (30%), Gaps = 53/345 (15%)

Query: 15  RGFIHQISN-PRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +  + LD   ++     Y G   ++ ++H GHL   +   WLQ     P+ +
Sbjct: 138 RGIFFSHRDMNQILDAYENKKPFYLYTGRGPSSEAMHLGHLVPFIFTKWLQDVFDVPLVI 197

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                         D+ + + +   +++            I  G       +        
Sbjct: 198 -----------QMSDDEKYLWKDLTLEQAYSYTVENAKDIIACGFDVNKTFIF--SDLEQ 244

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA-----YDFVELA 188
           S  +   + +I    + N+      V+       S    + ++  +QA       F ++ 
Sbjct: 245 SPGFYKNVVKIQKHVTFNQ------VKGIFGFTDSDCIGKISFPAVQAAPSFSNSFPKIF 298

Query: 189 K---NYDCRLQMGGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTASGTKMGKTLS 242
           +   +  C +     DQ        D+  R+  PK   L +   P L  A  TKM  +  
Sbjct: 299 RDRTDIQCLIPC-AIDQDPYFRMTRDVAPRIGHPKPALLHSTFFPALQGAQ-TKMSASDP 356

Query: 243 G-AIWLNKE----------------MTSPYNFWQYWRNIDDADVVSFAKRL--TTLPMSE 283
             +I+L                     +     Q+  N +      +          + +
Sbjct: 357 NSSIFLTDTAKQIKSKVNKHAFSGGRDTVEEHRQFGGNCEVDVSFMYLTFFLEDDDSLEQ 416

Query: 284 IDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAA-TAAMECF 327
           I +          E KK +   +  ++   +   KA     ++ F
Sbjct: 417 IRKDYTSGAMLTGELKKTLIDVLQPLIAEHQARRKAVTEETVKEF 461


>gi|330811605|ref|YP_004356067.1| Tryptophan--tRNA ligase [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327379713|gb|AEA71063.1| Tryptophan--tRNA ligase [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 451

 Score = 44.4 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 31/160 (19%), Positives = 49/160 (30%), Gaps = 28/160 (17%)

Query: 166 EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL----KTPKL 221
           +  ++   ++Y +L A D + +   +   +   G DQ  ++    D+G+R        K 
Sbjct: 128 DAGITMGLYSYPVLMAADIL-MFNAHKVPV---GRDQIQHVEMARDIGQRFNHLFGQGKE 183

Query: 222 FALTSP---------LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNID------- 265
           F  T P          L    G KM K+    I L        +                
Sbjct: 184 F-FTMPEALIEESVATLPGLDGRKMSKSYDNTIPLFSSAKDMKDAISRIVTDSRAPGEAK 242

Query: 266 DADVVSFAKRLTTLPMSEID---RMAKLQGKEINEAKKII 302
           D D             +E     R   LQG    EAK  +
Sbjct: 243 DPDNSHLFTLFQAFATAEQSAEFRSELLQGLGWGEAKNRL 282


>gi|160900847|ref|YP_001566429.1| tryptophanyl-tRNA synthetase [Delftia acidovorans SPH-1]
 gi|160366431|gb|ABX38044.1| tryptophanyl-tRNA synthetase [Delftia acidovorans SPH-1]
          Length = 430

 Score = 44.4 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 19/97 (19%), Positives = 31/97 (31%), Gaps = 20/97 (20%)

Query: 164 KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL----GERLKTP 219
           + +  ++   F Y +L A D +     +   +   G DQ  +I    D+           
Sbjct: 125 ETDDGVTAGLFMYPVLMAADILAFNA-HKVPV---GRDQVQHIEMARDMASSFNHIYGGE 180

Query: 220 KLFALTSP---------LLTTASGTKMGKTLSGAIWL 247
                T P          L    G KM K+ +  I L
Sbjct: 181 ---FFTLPEAQVEENVATLPGLDGRKMSKSYNNTIAL 214


>gi|302664645|ref|XP_003023950.1| tryptophanyl-tRNA synthetase [Trichophyton verrucosum HKI 0517]
 gi|291187973|gb|EFE43332.1| tryptophanyl-tRNA synthetase [Trichophyton verrucosum HKI 0517]
          Length = 446

 Score = 44.4 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 15/65 (23%), Positives = 23/65 (35%), Gaps = 1/65 (1%)

Query: 15  RGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +  + LD          Y G   ++ +LH GH   L    WLQ     P+ +
Sbjct: 80  RGLFFSHRDFDKILDKYEKGEPFFLYTGRGPSSDALHLGHTIPLTFTKWLQDVFDVPLGI 139

Query: 74  MGGGT 78
           +    
Sbjct: 140 LSLLP 144


>gi|329113791|ref|ZP_08242562.1| Putative RNA pseudouridine synthase [Acetobacter pomorum DM001]
 gi|326696801|gb|EGE48471.1| Putative RNA pseudouridine synthase [Acetobacter pomorum DM001]
          Length = 258

 Score = 44.4 bits (104), Expect = 0.035,   Method: Composition-based stats.
 Identities = 10/49 (20%), Positives = 23/49 (46%), Gaps = 1/49 (2%)

Query: 348 RGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
           RG  +   + ++G   S  +A R ++ N I++N   +++    +   D 
Sbjct: 6   RGERIAKWLARSG-VASRRDAERMIEENRIRLNGQPVTHPATFVTNGDI 53


>gi|294871822|ref|XP_002766059.1| IFP53, putative [Perkinsus marinus ATCC 50983]
 gi|239866624|gb|EEQ98776.1| IFP53, putative [Perkinsus marinus ATCC 50983]
          Length = 1254

 Score = 44.4 bits (104), Expect = 0.035,   Method: Composition-based stats.
 Identities = 53/334 (15%), Positives = 97/334 (29%), Gaps = 49/334 (14%)

Query: 15  RGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +   L     +G     Y G   ++ SLH GHL       WLQ T   P+ +
Sbjct: 250 RGLFFSHRDLGILLDKYERGIPFYLYTGRGPSSESLHLGHLVPFQFTKWLQDTFDVPLVI 309

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                 +  D  F  +    +  +E               I  G       + ++  ++ 
Sbjct: 310 -----QLTDDEKFFFKD--YLSLEEAHRLA---YENAKDIIACGFDMDKTFIFSDLDYMG 359

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA----- 188
           ++     + +I    + N+  +  +         S+    F   I  +  F         
Sbjct: 360 TMYPN--VCKIQKLVTYNQ--ARGAFG--FTGSDSVGKSSFC-AIQASPSFSTTFPSIFG 412

Query: 189 --KNYDCRLQMGGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTASGTKMGKTLSG 243
             K+  C +     DQ        D+  R+   K   + +   P L     TKM  ++  
Sbjct: 413 DRKDIMCLIPQ-AIDQDPYFRVTRDVAPRMGMLKPALIHSKFFPALRGHK-TKMSGSVGN 470

Query: 244 -AIWLN------KEMTSPYNFWQ----------YWRNIDDADVVSFAKRL--TTLPMSEI 284
             I +       K     Y F            Y  N++      + + +        +I
Sbjct: 471 TTIMVTDSKKEIKNKIMKYCFSGGQDSAEEQRKYGANLEVDVAYEYLRYVMEDDEKFKQI 530

Query: 285 DRMAKLQGKEINEAKKIIATEITTMVHGREEAEK 318
                       E K I+  E+  +    +EA  
Sbjct: 531 GEDYSSGKLLTGEVKNILVEELVNLTKAHQEARA 564


>gi|121608592|ref|YP_996399.1| tryptophanyl-tRNA synthetase [Verminephrobacter eiseniae EF01-2]
 gi|121553232|gb|ABM57381.1| tryptophanyl-tRNA synthetase [Verminephrobacter eiseniae EF01-2]
          Length = 455

 Score = 44.4 bits (104), Expect = 0.035,   Method: Composition-based stats.
 Identities = 27/209 (12%), Positives = 58/209 (27%), Gaps = 23/209 (11%)

Query: 50  HAGHLTQLML--LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIK 107
           H G+    +   +   ++ G +    +    ++I     +   R  +             
Sbjct: 20  HLGNFVGSIRPSVAASRQPGVQSFYFLADYHALIKCEDPQRVQRSTLEIAASWLAAGLDP 79

Query: 108 GIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ 167
              + + +    +         TWL  +  +     +    +        S   R + + 
Sbjct: 80  EQVTFYRQSDIPEIPE-----LTWL--LTCVTGKGLLNRAHAYKAANDKNSAAGR-EADA 131

Query: 168 SLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSP 227
            ++   F Y +L   D + L   +   +   G DQ  +I     +              P
Sbjct: 132 GVTAGLFMYPLLMGADIL-LFNAHQVPV---GRDQSQHIEMARAMASSFNHLYGAHFVLP 187

Query: 228 ---------LLTTASGTKMGKTLSGAIWL 247
                    +L    G KM K+    I L
Sbjct: 188 EAAIDEHVAILPGLDGRKMSKSYDNTIPL 216


>gi|332252577|ref|XP_003275429.1| PREDICTED: tryptophanyl-tRNA synthetase, cytoplasmic-like isoform 2
           [Nomascus leucogenys]
 gi|332252581|ref|XP_003275431.1| PREDICTED: tryptophanyl-tRNA synthetase, cytoplasmic-like isoform 4
           [Nomascus leucogenys]
 gi|332252585|ref|XP_003275433.1| PREDICTED: tryptophanyl-tRNA synthetase, cytoplasmic-like isoform 6
           [Nomascus leucogenys]
          Length = 472

 Score = 44.4 bits (104), Expect = 0.035,   Method: Composition-based stats.
 Identities = 38/248 (15%), Positives = 81/248 (32%), Gaps = 31/248 (12%)

Query: 15  RGFIHQISN-PRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +  + LD   ++     Y G   ++ ++H GHL   +   WLQ   + P+ +
Sbjct: 135 RGIFFSHRDMNQVLDAYENKKPFYLYTGRGPSSEAMHVGHLIPFIFTKWLQDVFNVPLVI 194

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                         D+ + + +   + +            I  G       + ++  ++ 
Sbjct: 195 -----------QMTDDEKYLWKDLTLDQAYSYAVENAKDIIACGFDINKTFIFSDLDYMG 243

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA--------YDFV 185
                   + +     + + ++F  V+       S    + ++  +QA            
Sbjct: 244 --MSSGFYKNV---VKIQKHVTFNQVKGIFGFTDSDCIGKISFPAIQAAPSFSNSFPQIF 298

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTASGTKMGKTLS 242
           +   +  C +     DQ        D+  R+  PK   L +   P L  A  TKM  +  
Sbjct: 299 QDRTDIQCLIPC-AIDQDPYFRMTRDVAPRIGYPKPALLHSTFFPALQGAQ-TKMSASDP 356

Query: 243 G-AIWLNK 249
             +I+L  
Sbjct: 357 NSSIFLTD 364


>gi|313886256|ref|ZP_07819985.1| tryptophan--tRNA ligase [Porphyromonas asaccharolytica PR426713P-I]
 gi|312924327|gb|EFR35107.1| tryptophan--tRNA ligase [Porphyromonas asaccharolytica PR426713P-I]
          Length = 331

 Score = 44.4 bits (104), Expect = 0.035,   Method: Composition-based stats.
 Identities = 37/222 (16%), Positives = 70/222 (31%), Gaps = 32/222 (14%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   T   LH G+    M  F   +  +     +    S+   P        +  +  I 
Sbjct: 7   GIRPTG-HLHIGNYYGAMRSFLEMQEQYDCYFFIADWHSLTTHPHP---GDIVQDTDTIL 62

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
              E +             ++D   +        +     L E+    +          +
Sbjct: 63  --AEYLACGLDPSKVVLYRQSDVPEV--LELYLYLNMNAYLGELQRTTTFKE-------K 111

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT-- 218
           +R K+  +++     Y  L A D + L +     +   G DQ  N+        R  T  
Sbjct: 112 AR-KQPDNVNAGLLTYPTLMAADIL-LQRAVKVPV---GKDQEQNMEMARRFARRFNTIY 166

Query: 219 ------PKLF--ALTSPL-LTTASGT-KMGKTLSGAIWLNKE 250
                       A++ P+ +    G+ KMGK+   AI+L ++
Sbjct: 167 GVEYFTEPASWTAMSKPIKVPGLDGSGKMGKSEGNAIYLYED 208


>gi|239917013|ref|YP_002956571.1| tryptophanyl-tRNA synthetase [Micrococcus luteus NCTC 2665]
 gi|281414525|ref|ZP_06246267.1| tryptophanyl-tRNA synthetase [Micrococcus luteus NCTC 2665]
 gi|239838220|gb|ACS30017.1| tryptophanyl-tRNA synthetase [Micrococcus luteus NCTC 2665]
          Length = 360

 Score = 44.4 bits (104), Expect = 0.035,   Method: Composition-based stats.
 Identities = 44/299 (14%), Positives = 95/299 (31%), Gaps = 51/299 (17%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSII--GDPSFRDESRRMMRSQE 98
           G   +A SLH G+    ++ +   +   +    +    +I    DP+   E  R+  +Q 
Sbjct: 34  GMQPSADSLHLGNYLGALVNWERTQADFEAFFFIPDLHAITVPQDPAALAERTRVAAAQF 93

Query: 99  IQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
           I   I+  +       +       A +            +  +  +G    + +    + 
Sbjct: 94  IAGGIDPERSTLFVQSQVPEHAQLAWV------------LTCMTGMGEAMRMTQF--KDK 139

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
              +      +  L   Y +L A D + L + +   +   G DQ  ++    DL +R   
Sbjct: 140 SAKQGADAAGVGLL--AYPMLMAADIL-LYQPHGVPV---GDDQRQHVELTRDLAQRFNH 193

Query: 219 PKLFALTSPLLTT---ASGT----------KMGKTLSGAIWLNKEMTSPYNFWQYWRNID 265
              +  T  + T     +G           KM K+ +    L   +  P    +  ++  
Sbjct: 194 R--YGETFVVPTGFYPETGARIYDLQDPTSKMSKSAASPNGLINVLDEPKKTAKKIKSAV 251

Query: 266 DAD-------------VVSFAKRLTTLPMSEIDRMAKL-QGKEINEAKKIIATEITTMV 310
             D             V +    L+ +  + I ++ +   GK     K  +A  +   +
Sbjct: 252 TDDGTEARFDREAKPGVSNLLTILSAVSGTPIPQLEEEFVGKMYGHLKVAVADAVVERL 310


>gi|259481556|tpe|CBF75186.1| TPA: tryptophanyl-tRNA synthetase (AFU_orthologue; AFUA_2G01640)
           [Aspergillus nidulans FGSC A4]
          Length = 424

 Score = 44.4 bits (104), Expect = 0.035,   Method: Composition-based stats.
 Identities = 16/61 (26%), Positives = 21/61 (34%), Gaps = 1/61 (1%)

Query: 15  RGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +  + L           Y G   ++ SLH GH   L    WLQ     P+  
Sbjct: 71  RGLFFSHRDFEKILTKKEKGEPFFLYTGRGPSSGSLHLGHTIPLTFTKWLQDVFDVPLVF 130

Query: 74  M 74
           M
Sbjct: 131 M 131


>gi|325268750|ref|ZP_08135378.1| ribosomal large subunit pseudouridine synthase B [Prevotella
           multiformis DSM 16608]
 gi|324988918|gb|EGC20873.1| ribosomal large subunit pseudouridine synthase B [Prevotella
           multiformis DSM 16608]
          Length = 509

 Score = 44.4 bits (104), Expect = 0.036,   Method: Composition-based stats.
 Identities = 13/74 (17%), Positives = 29/74 (39%), Gaps = 1/74 (1%)

Query: 342 SKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
              + +  + L   +  AG   S  EA   + S A+ +N  ++     ++   D      
Sbjct: 266 ENFDPNEPIRLNKYLANAGVC-SRREADEFILSGAVTVNGEVVKELGSKVLRSDVVLFQE 324

Query: 402 IKLSFGKKNHIICH 415
             +S  KK +++ +
Sbjct: 325 KPVSLEKKVYVLLN 338


>gi|288553422|ref|YP_003425357.1| tryptophanyl-tRNA synthetase [Bacillus pseudofirmus OF4]
 gi|288544582|gb|ADC48465.1| tryptophanyl-tRNA synthetase [Bacillus pseudofirmus OF4]
          Length = 329

 Score = 44.4 bits (104), Expect = 0.036,   Method: Composition-based stats.
 Identities = 56/348 (16%), Positives = 110/348 (31%), Gaps = 74/348 (21%)

Query: 37  TAYIGYDLTASSLHAGHLTQLMLLFWL---QKTGHKPISLMGGGTSIIGDPSFRDESRRM 93
           T + G   + + L  G+      +      Q   +    ++      +  P  R + R  
Sbjct: 3   TVFSGIQPSGT-LTLGNYLG--AMKHFVDMQNEANCYFCIVDQHAITV--PQDRLKLREN 57

Query: 94  MRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRM 153
           +RS         I    S+          A +     W+  ++ +  + E+       RM
Sbjct: 58  IRSLAALYLAVGIDPNKSTLFIQSEVPAHAQL----GWM--MQCVAYIGEL------ERM 105

Query: 154 LSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLG 213
                 + +   ++++S     Y  L A D + L K     +   G DQ  ++    DL 
Sbjct: 106 TQ---FKDKSDGKEAVSASLLTYPPLMAADIL-LYKTDIVPV---GEDQKQHLELTRDLA 158

Query: 214 ERLKTPKLFALTSP----------LLTTAS-GTKMGKTLSGAIWLNKEMTSPYNFWQYWR 262
           ER         T P          +++      KM K+   A      +  P    +  +
Sbjct: 159 ERFNKKYNDIFTIPEVRIPKVGARIMSLNDPSKKMSKSNPNAKSYISMLDDPKTITKKIK 218

Query: 263 N-IDDAD---------------VVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           + + D D               ++S     + + + E++R  K QG    E K+ +A  +
Sbjct: 219 SAVTDTDGEIKFNREDKPAVSNLLSIYSLCSGISIEELER--KYQGAGYGEFKQDLADVV 276

Query: 307 TT-------MVHG-----------REEAEKAATAAMECFDMSIHSQHM 336
            +         H             E AEKA   A +  + +  +  +
Sbjct: 277 VSTLEPIQQRYHELIESEELDRILDEGAEKANRTASKMVEKAERAMGL 324


>gi|217967851|ref|YP_002353357.1| tryptophanyl-tRNA synthetase [Dictyoglomus turgidum DSM 6724]
 gi|217336950|gb|ACK42743.1| tryptophanyl-tRNA synthetase [Dictyoglomus turgidum DSM 6724]
          Length = 329

 Score = 44.4 bits (104), Expect = 0.036,   Method: Composition-based stats.
 Identities = 28/172 (16%), Positives = 54/172 (31%), Gaps = 32/172 (18%)

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK----- 217
           ++    +++    Y +LQA D + + +     +   G DQ  ++    ++  R       
Sbjct: 118 MEGRDLMTYGFLGYPVLQAADIL-IYRADTVPV---GEDQLPHLELTREIARRFNYFYSP 173

Query: 218 --TPKLFALT-SPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDAD------ 268
                   L+  P L    G KM K+    I L+ E        +        D      
Sbjct: 174 IFPEPQAKLSEVPELVGIDGRKMSKSYGNTIPLDTE----EEELKKLVRSMITDPARIRK 229

Query: 269 ----------VVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMV 310
                     V ++ K      + EID   +       E K  +A ++   +
Sbjct: 230 NDPGHPEVCTVFAYHKIFNKEEIEEIDYACRNAQIGCVECKMKLAEKLNQFL 281


>gi|307244136|ref|ZP_07526254.1| isoleucine--tRNA ligase [Peptostreptococcus stomatis DSM 17678]
 gi|306492507|gb|EFM64542.1| isoleucine--tRNA ligase [Peptostreptococcus stomatis DSM 17678]
          Length = 1040

 Score = 44.4 bits (104), Expect = 0.036,   Method: Composition-based stats.
 Identities = 26/124 (20%), Positives = 46/124 (37%), Gaps = 24/124 (19%)

Query: 169 LSFLEFNYMILQAYDFVELA-KNYDCRLQMGGSDQ---WGNIICGIDLGERLKTPKLFAL 224
           + F +++Y      +F EL   +Y C     G DQ   W   +  +      K+P    L
Sbjct: 530 MPFAQWHYPFENKENFDELFPADYICE----GIDQTRGWFYSLLAVSTFVTGKSPYKNVL 585

Query: 225 TSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRL-----TTL 279
            + L+   +G KM K+    I       +P+  ++ +     AD + +         T L
Sbjct: 586 VTDLVLDKNGKKMSKSKGNTI-------NPFEMFEKY----GADALRWYLLYVSPPWTPL 634

Query: 280 PMSE 283
              E
Sbjct: 635 RFDE 638


>gi|154509247|ref|ZP_02044889.1| hypothetical protein ACTODO_01772 [Actinomyces odontolyticus ATCC
           17982]
 gi|153798881|gb|EDN81301.1| hypothetical protein ACTODO_01772 [Actinomyces odontolyticus ATCC
           17982]
          Length = 366

 Score = 44.4 bits (104), Expect = 0.036,   Method: Composition-based stats.
 Identities = 55/300 (18%), Positives = 88/300 (29%), Gaps = 45/300 (15%)

Query: 26  ELDILCSQGVVTAYI--GYDLTASSLHAGHLTQ-LMLLFWLQKTGHKPISLMGGGTSIIG 82
           E+D+   Q      I  G   T   LH GH    L     LQ  G +   L+     +I 
Sbjct: 26  EIDLAIDQDPSRFRILTGDRPTG-HLHLGHYFGTLRNRVLLQNRGVETWVLVADY-QVIT 83

Query: 83  DPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLR 142
           D       R  +           I    S+        +    LN          +  L 
Sbjct: 84  DRDGVGPIRERVLGLVADYLAAGIDAERSTIF----NHSAVPALN-------QLMLPFLS 132

Query: 143 EIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQ 202
            +              + +     ++++ L   Y + QA D +    N    +   G DQ
Sbjct: 133 LVTESELHRNPTVKAELEA--TEGRAMTGLMLTYPVHQAADILFCKAN----IVPVGQDQ 186

Query: 203 WGNIICGIDLGERLKT--------------PKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
             ++     + +R                 P+      PLL    G KM K+    I L 
Sbjct: 187 LPHLEQARLIAQRFDKRYGRATPERPVFPRPEALLSEVPLLLGTDGQKMSKSRGNTIELR 246

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLP--MSEIDRMAKLQGKEINEAKKIIATEI 306
                     +  +   DA+     +R+T  P    E+  +  L      EA + IA  I
Sbjct: 247 MTADETAKILKKAK--TDAE-----RRITFDPEGRPEVSNLLMLASLATGEAPEAIADHI 299


>gi|126302605|sp|Q92IB5|SYK_RICCN RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
          Length = 522

 Score = 44.4 bits (104), Expect = 0.036,   Method: Composition-based stats.
 Identities = 22/135 (16%), Positives = 41/135 (30%), Gaps = 8/135 (5%)

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            DF           +M G D   N     ++   L       L   L    +G K+ K+ 
Sbjct: 236 PDFGMRWAALKVDYEMYGKDHLANARLYSEICRILGGKPPVQLCYELFLDENGKKISKSK 295

Query: 242 SGAIWLNK-EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINE 297
             +I ++     +P      +      +     +    +    +D       K   E + 
Sbjct: 296 GNSISIDDWLKYAPVESMALFMY---QNPTRAKRLFFDVIPKNVDEYITFNQKYHLEEDR 352

Query: 298 AKKIIATEITTMVHG 312
           AK+  A  +  + HG
Sbjct: 353 AKR-FANPVYHIHHG 366


>gi|57641809|ref|YP_184287.1| tryptophanyl-tRNA synthetase [Thermococcus kodakarensis KOD1]
 gi|73919848|sp|Q5JEP3|SYW_PYRKO RecName: Full=Tryptophanyl-tRNA synthetase; AltName:
           Full=Tryptophan--tRNA ligase; Short=TrpRS
 gi|57160133|dbj|BAD86063.1| tryptophanyl-tRNA synthetase [Thermococcus kodakarensis KOD1]
          Length = 384

 Score = 44.4 bits (104), Expect = 0.036,   Method: Composition-based stats.
 Identities = 49/316 (15%), Positives = 96/316 (30%), Gaps = 51/316 (16%)

Query: 38  AYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQ 97
            Y G   +   +H GH+       WLQ+     + +       I D        ++    
Sbjct: 75  LYTGRGPSGP-MHIGHIIPFFATKWLQENFDVNLYI------QITDDEKFLFKEKLSFED 127

Query: 98  EIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFE 157
             +   E I  I +             +  N  +       ++   I     +N  ++  
Sbjct: 128 TKRWAYENILDIIAVGFDPDKT----FIFQNSEFTK---IYEMALPIAKK--INFSMARA 178

Query: 158 SVRSRLKREQSLSFLEFNYMILQ-AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE-- 214
                 + +  + F    Y  +Q A  F E  +   C +     DQ        D  E  
Sbjct: 179 VFGFNEQSKIGMIF----YPAIQAAPTFFEKKR---CLIP-AAIDQDPYWRLQRDFAESL 230

Query: 215 -RLKTPKLFALTSPLLTTASGTKMGKTLSG-AIWLNKEMTSP-YNFWQYWR--------- 262
              KT  + +   P LT+  G KM  +    A++L  +        W++           
Sbjct: 231 GYYKTAAIHSKFVPGLTSLEG-KMSASKPETAVYLTDDPEEAGKKIWKFALTGGQPTLKE 289

Query: 263 ------NIDDADVVSFAKRLTTLPMSE--IDRMAKLQGKEI--NEAKKIIATEITTMVHG 312
                 N +   V  + +     P  E  ++R    +  E+   + K+ +   +   +  
Sbjct: 290 QREKGGNPEKCVVFKWFEIF-FEPDDEKLMERYRACKAGELTCGQCKRELIERVQKFLKE 348

Query: 313 REEAEKAATAAMECFD 328
            ++  K A   +E F 
Sbjct: 349 HQKKRKEAEKKVEKFK 364


>gi|302870427|ref|YP_003839064.1| tryptophanyl-tRNA synthetase [Micromonospora aurantiaca ATCC 27029]
 gi|302573286|gb|ADL49488.1| tryptophanyl-tRNA synthetase [Micromonospora aurantiaca ATCC 27029]
          Length = 352

 Score = 44.4 bits (104), Expect = 0.036,   Method: Composition-based stats.
 Identities = 50/358 (13%), Positives = 99/358 (27%), Gaps = 77/358 (21%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGG------TSIIGDPSFRDESRRMMRSQ 97
            T   LH GH    +         ++   ++          S          +R M+   
Sbjct: 12  PTGR-LHLGHYVGSIANRVRLHQRYESFFIIADLHMLTTRNSRADIEQVAHNAREMVT-D 69

Query: 98  EIQENIEKIKGIFSSFIKYGTGKTDALMLNNE---TWLCSIKYI-DLLREIGSFFSVNRM 153
            +   +E  +  F              +  N      L  +  + ++ R+ G        
Sbjct: 70  ILAAGVEPERATFYLQSAIPEVGDLNTLFQNLITVPRLERVPSLKEMTRDAGK------- 122

Query: 154 LSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLG 213
                       E     L   Y +LQA D + +       + +G  D   ++    ++ 
Sbjct: 123 -----------DEMPYGLL--GYPVLQAADILCVK---GQVVPVG-KDNAAHVEVTREIA 165

Query: 214 ERLKT--PKLFAL------TSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNI 264
            R      ++F +       +P L    G  KM K+   AI L+ +  +     +     
Sbjct: 166 RRFNHLYGEVFPVPDMLMSETPTLVGTDGAGKMSKSKGNAIALSDDAAT---VRRKVMG- 221

Query: 265 DDADVVSFAKRLTTLPMSEIDRMAKLQGK---------EINEAKKI-IATEITTMVHGRE 314
                       T       D    ++G            + A+   +         G  
Sbjct: 222 ----------MYTDPNRVRADVPGTVEGNPVFEYHDIFNPDRAQVADLKARYRAGRVGDV 271

Query: 315 EAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHL 372
           E ++A   A+  F        +  I   +       GL+  ++  G   +  + RR L
Sbjct: 272 EVKEALATALNRF--------LDPIRERRARFEAQPGLVDELIVTGTERTREQVRRTL 321


>gi|307107979|gb|EFN56220.1| hypothetical protein CHLNCDRAFT_30844 [Chlorella variabilis]
          Length = 341

 Score = 44.4 bits (104), Expect = 0.036,   Method: Composition-based stats.
 Identities = 39/235 (16%), Positives = 82/235 (34%), Gaps = 27/235 (11%)

Query: 19  HQISNPRELDILCSQGV-VTAYIGYDLTASSLHA--GHLTQLMLLFWLQKTGHKPISLMG 75
            +     EL  L  +   + AY G++ +   +H   G L  L +   L K G      + 
Sbjct: 51  EECIQEAELRRLLEKKPHIVAYDGFEPSGR-MHIAQGVLKALNVNK-LTKCGVTFKFWVA 108

Query: 76  GGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSI 135
              + + +    D  +  +  + + E  + +       +++ +   +     +E W    
Sbjct: 109 DWFAQMNNKMGGDLKKIQVVGRYLVEIWKAVGMNMER-VEFLSCSEEINKRPDEYW---- 163

Query: 136 KYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRL 195
               L+ +I    ++ R+L    +  R + +  LS  +  Y I+QA D   L  +  C+L
Sbjct: 164 ---SLVMDIARRNNLKRVLRCTQIMGRSENDD-LSAAQIFYPIMQAADIFFLKADI-CQL 218

Query: 196 QMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKE 250
              G DQ                  +  L+  +       KM K+   +    ++
Sbjct: 219 ---GMDQ-------RKGARPRLRAAVHLLSVAMCPGQE--KMSKSDPNSAIFMED 261


>gi|307330674|ref|ZP_07609812.1| tryptophanyl-tRNA synthetase [Streptomyces violaceusniger Tu 4113]
 gi|306883653|gb|EFN14701.1| tryptophanyl-tRNA synthetase [Streptomyces violaceusniger Tu 4113]
          Length = 337

 Score = 44.4 bits (104), Expect = 0.036,   Method: Composition-based stats.
 Identities = 48/295 (16%), Positives = 97/295 (32%), Gaps = 43/295 (14%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   TA S H G+    +  +   +  H     +    + I  P             E++
Sbjct: 11  GIQPTAGSFHLGNYLGAIRQYVALQETHDAFYTVVDLHA-ITVPQ---------DPAELR 60

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
            N         +       +    + ++      + +  ++  +  F   +RM  F+   
Sbjct: 61  ANSRLAAAQLLASG-LDPDRCTLFIQSHVPEHAQLGW--VMNCLTGFGEASRMTQFKDKS 117

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT-- 218
           +R   +++   L F Y ILQ  D + L +     +   G DQ  +I    DL +R     
Sbjct: 118 ARHGADRATVGL-FTYPILQVADIL-LYQANHVPV---GEDQRQHIELTRDLADRFNGRF 172

Query: 219 ------PKLFAL--TSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRN-IDDAD 268
                 P+ + +  T  +      T KM K+ S    +   +  P    +  ++ + D +
Sbjct: 173 GETFTVPEAYIVKETGKIYDLQDPTIKMSKSASTPKGIVSLLDEPKVSAKKIKSAVTDLE 232

Query: 269 ------------VVSFAKRLTTLPMSEIDRMAKL-QGKEINEAKKIIATEITTMV 310
                       V +     +TL  + I  +    +GK     K  ++  +   V
Sbjct: 233 TEIRYDEEKKPGVSNLLTIYSTLTGTSIPELESRYEGKGYGALKTELSEVLVEWV 287


>gi|256829021|ref|YP_003157749.1| tryptophanyl-tRNA synthetase [Desulfomicrobium baculatum DSM 4028]
 gi|256578197|gb|ACU89333.1| tryptophanyl-tRNA synthetase [Desulfomicrobium baculatum DSM 4028]
          Length = 337

 Score = 44.4 bits (104), Expect = 0.036,   Method: Composition-based stats.
 Identities = 20/91 (21%), Positives = 40/91 (43%), Gaps = 13/91 (14%)

Query: 166 EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKLFA 223
           ++ ++   ++Y IL A D +     ++  +   G DQ  ++    D+ +R      + F 
Sbjct: 128 DKGITMGLYSYPILMAADILM----FNANIVPVGKDQTQHLEMTRDIAQRFNHHFGEHFV 183

Query: 224 L-------TSPLLTTASGTKMGKTLSGAIWL 247
           L       ++ +LT   G KM K+ +  I L
Sbjct: 184 LPEARVDESTAVLTGLDGRKMSKSYNNYIPL 214


>gi|159036791|ref|YP_001536044.1| tryptophanyl-tRNA synthetase [Salinispora arenicola CNS-205]
 gi|157915626|gb|ABV97053.1| tryptophanyl-tRNA synthetase [Salinispora arenicola CNS-205]
          Length = 352

 Score = 44.4 bits (104), Expect = 0.036,   Method: Composition-based stats.
 Identities = 41/239 (17%), Positives = 69/239 (28%), Gaps = 46/239 (19%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGG----GTSIIGDPSFRDESR-RMMRSQE 98
            T   LH GH    +         ++   ++       T    D   R     R M    
Sbjct: 12  PTGK-LHLGHYVGSIANRVKLHQRYESFFIIADLHMLTTKNTRDDIARATQNARDMVLDS 70

Query: 99  IQENIEKIKGIFSSFIKYGTGKTDALMLNNE---TWLCSIKYI-DLLREIGSFFSVNRML 154
           +   I+     F              +  N      L  +  + D+ R+ G         
Sbjct: 71  LAAGIDPDTATFYLQSAIQEVGDLNTLFQNLVTVPRLERVPSLKDMARDAGK-------- 122

Query: 155 SFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
                      E     L   Y +LQA D + +  +    +   G D   ++    +L  
Sbjct: 123 ----------DEMPYGLL--GYPVLQAADILCVKAH----VVPVGKDNAAHVEVTRELAR 166

Query: 215 RLKT--------PKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNI 264
           R           P+L +  +P L    G  KM K+L   I L+ E   P +  +    +
Sbjct: 167 RFNHLYGEVFPVPELVSAETPTLVGTDGRAKMSKSLGNVIALSDE---PADVRRKVMGM 222


>gi|114761059|ref|ZP_01440974.1| tryptophanyl-tRNA synthetase [Pelagibaca bermudensis HTCC2601]
 gi|114545307|gb|EAU48309.1| tryptophanyl-tRNA synthetase [Roseovarius sp. HTCC2601]
          Length = 333

 Score = 44.4 bits (104), Expect = 0.036,   Method: Composition-based stats.
 Identities = 37/220 (16%), Positives = 66/220 (30%), Gaps = 29/220 (13%)

Query: 45  TASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIE 104
           T   LH GH    +      +  H    L+    ++  +    ++ RR +    +     
Sbjct: 13  TGP-LHIGHYAGSLANRLRYQDSHDQFLLLADTQALTDNAHDPEKVRRSVIEVALDYLAV 71

Query: 105 KIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-L 163
            I             +T   + ++   L  +  +  L  +            + +R+R  
Sbjct: 72  GI----------DPARTTICLQSHLPALAELSML-YLNFVTVARLERNPTIKDEIRARGF 120

Query: 164 KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFA 223
            R+    FL   Y   QA D       +   +   G DQ   I    ++  R+ T    A
Sbjct: 121 GRDTPAGFL--CYPAAQAADITA----FKATVVPVGEDQAPLIEQTNEIVRRINTTAGCA 174

Query: 224 LTSPL---------LTTASGT-KMGKTLSGAIWLNKEMTS 253
           +             L    G  KM K+   AI L+     
Sbjct: 175 VLPEARAVIPKGGRLPGIDGKAKMSKSGGNAIALSASPDE 214


>gi|332885448|gb|EGK05697.1| tryptophanyl-tRNA synthetase [Dysgonomonas mossii DSM 22836]
          Length = 329

 Score = 44.4 bits (104), Expect = 0.037,   Method: Composition-based stats.
 Identities = 39/289 (13%), Positives = 83/289 (28%), Gaps = 52/289 (17%)

Query: 49  LHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFR---DESRRMMRSQEIQENIE 104
           LH G+    L     +Q   +K    +    S+   P  +      + ++     +    
Sbjct: 14  LHLGNYFGALRNFTRMQ-HENKCFFFIADYHSLTTHPDPKILHGNVKNVLT----EYLAA 68

Query: 105 KIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK 164
            I    S+            +         +     + E+    S       E  R    
Sbjct: 69  GIDPEVSTIYVQSDVTEVCEL------YLLLNMHAYMGELSKTVSF-----KEKARKH-- 115

Query: 165 REQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT------ 218
              +++     Y  L A D +     ++      G DQ  ++        R         
Sbjct: 116 -PDNVNAGLLTYPTLMAADILM----HNADKVPVGKDQEQHLEMTRKFARRFNNMYGVEY 170

Query: 219 --PKL---FALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWR---------N 263
               +   F      +    G+ KMGK+    I+L+++  S     +            +
Sbjct: 171 FKEPVAYNFGEELIKIPGLDGSGKMGKSEGNCIYLDEDAKSIEKKVKRALTDEGPKEPNS 230

Query: 264 IDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EIN--EAKKIIATEITT 308
           +    + +    L  +   E+ +  + +    EI   + KK +A +I  
Sbjct: 231 VKPDCIENLFTILKVVSTDEVVQHFEDKWNTCEIRYGDLKKQLAEDIIK 279


>gi|238920532|ref|YP_002934047.1| tryptophanyl-tRNA synthetase II [Edwardsiella ictaluri 93-146]
 gi|238870101|gb|ACR69812.1| tryptophanyl-tRNA synthetase, putative [Edwardsiella ictaluri
           93-146]
          Length = 343

 Score = 44.4 bits (104), Expect = 0.037,   Method: Composition-based stats.
 Identities = 34/222 (15%), Positives = 67/222 (30%), Gaps = 31/222 (13%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
            T   LH GH    +      +       ++     +       D   +       Q+  
Sbjct: 21  PTGP-LHLGHYVGSLRQRLTLQQRFPLYVMIADLQGL------TDNGSQP------QKVA 67

Query: 104 EKIKGIFSSFIKYGTGKTDA--LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
           + I  + + ++  G     A   + +    L  +  + +     +  + N  +  E  + 
Sbjct: 68  DNILQVMADYLAVGIDPQRATLCLQSALPALAELTMLYMNIVSVARVARNPTVKAEIAQK 127

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--- 218
                    FL   Y I QA D       +       G DQ   +    ++ +R+ T   
Sbjct: 128 GFANSLPAGFL--LYPISQAADITA----FGADRIPVGDDQLPMLEQTNEIVQRMNTLLP 181

Query: 219 ----PKLFALTSPL--LTTASGT-KMGKTLSGAIWLNKEMTS 253
                   A+ S +  L    G  KM K+L   + L+ +   
Sbjct: 182 QPVLRPCQAILSQVGRLPGIDGNAKMSKSLGNTLPLSADPAQ 223


>gi|110667025|ref|YP_656836.1| tryptophanyl-tRNA synthetase [Haloquadratum walsbyi DSM 16790]
 gi|109624772|emb|CAJ51178.1| tryptophan--tRNA ligase [Haloquadratum walsbyi DSM 16790]
          Length = 614

 Score = 44.4 bits (104), Expect = 0.037,   Method: Composition-based stats.
 Identities = 36/224 (16%), Positives = 62/224 (27%), Gaps = 41/224 (18%)

Query: 12  LSERGFIHQISNPRELDILC-SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           L  RG I        +     +   V    G+  T    H GH      + W Q+ G   
Sbjct: 117 LMRRGVIFGHRGYDPVAEALQNNDPVAVLSGFMPTGDP-HIGHKLVFDEIIWHQQRGADA 175

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
            +L+    +            R +   EI ++         S +  G       +     
Sbjct: 176 YALIADLEAHAA---------RGLSWSEIDDHARDY---LLSLLALGFDPESGELYRQSE 223

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLS--------FLEFNYMILQAY 182
              + +  D   E+GS         FE +      E +++          +  Y  L+  
Sbjct: 224 ---NRELQDFAFELGSK---ANFSEFEGIYG-FDSETNVAYMQSVITQMADILYPQLEEP 276

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDL---GERLKTPKLFA 223
               +           G DQ  ++    DL       K  K +A
Sbjct: 277 KPTVI---------PVGPDQDPHVRFARDLAARMRFFKVTKAYA 311


>gi|309811198|ref|ZP_07704990.1| tryptophan--tRNA ligase [Dermacoccus sp. Ellin185]
 gi|308434810|gb|EFP58650.1| tryptophan--tRNA ligase [Dermacoccus sp. Ellin185]
          Length = 347

 Score = 44.4 bits (104), Expect = 0.037,   Method: Composition-based stats.
 Identities = 37/218 (16%), Positives = 64/218 (29%), Gaps = 35/218 (16%)

Query: 41  GYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           G   T+ SLH G+     +    +Q+ G  P   +    ++   P         +  +  
Sbjct: 20  GMQPTSDSLHLGNYLGAQINWVRMQE-GFTPYFCVVDLHALTVSPD------PALLRERS 72

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETW-LCSIKYIDLLREIGSFFSVNRMLS-FE 157
                +                 A+ + +       + +  +L  I  F    RM    +
Sbjct: 73  YATAAQYLAGG------VDPARSAVFVQSHVREHAELAW--VLNCITGFGEAGRMTQFKD 124

Query: 158 SVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK 217
               R     S+    F Y IL A D + L       +   G DQ  ++    +L +R  
Sbjct: 125 KAGKRGNDNTSVGL--FTYPILMAADIL-LYDAQYVPV---GEDQRQHLELTRNLAQRFN 178

Query: 218 TPKLFALTSPLLTTASGT-----------KMGKTLSGA 244
           +        P      GT           KM K+   A
Sbjct: 179 SRFGETFVVPEPYIPEGTARVMSLQDPTKKMSKSDENA 216


>gi|167381358|ref|XP_001735678.1| tryptophanyl-tRNA synthetase, cytoplasmic [Entamoeba dispar SAW760]
 gi|165902203|gb|EDR28090.1| tryptophanyl-tRNA synthetase, cytoplasmic, putative [Entamoeba
           dispar SAW760]
          Length = 389

 Score = 44.4 bits (104), Expect = 0.037,   Method: Composition-based stats.
 Identities = 49/325 (15%), Positives = 97/325 (29%), Gaps = 50/325 (15%)

Query: 15  RGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +    LD +     +  Y G   ++ +LH GHL   +   +LQ      + +
Sbjct: 55  RGLFFCHRDINPILDDVEKGNKIYLYTGRGPSSDALHLGHLIPFIFTKYLQDAFDCQLVV 114

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                         D+ + + +   I E  +         I  G       +  + T++ 
Sbjct: 115 -----------QLTDDEKYLWKPVTIAETEKYAIENIKDIIAAGLNPKKTFIFTDYTYME 163

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY-----DFVELA 188
            +    ++ +I S  + N++          +   +L  + F    +QA       F  L 
Sbjct: 164 RMYP--VVTKIQSRVTFNQV--KGIFG--FQPHDNLGKISF--PAIQAAPAFPESFPHLF 215

Query: 189 --KNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALT---SPLLTTASGTKMGKTLSG 243
             +   C +     DQ        D  E L   K   +     P L  + G KM  +   
Sbjct: 216 GKQKIRCLIPC-AIDQDPYFRMTRDHAESLGAYKPSLIMSKFFPALQGSMG-KMSASNPN 273

Query: 244 -AIWLNKEMTS---------------PYNFWQYWRNIDDADVVSFAKRL--TTLPMSEID 285
            AI+L                        F +    + D     + +        + +I 
Sbjct: 274 SAIYLIDTPQQIADKINNHAYCSVQDIEEFKKNGTKVADDVPYQYLRFFLNDDQQLEKIK 333

Query: 286 RMAKLQGKEINEAKKIIATEITTMV 310
              +       + K I+  ++  +V
Sbjct: 334 NDYENAQMMPQDVKNILIHQLQELV 358


>gi|295687634|ref|YP_003591327.1| RNA-binding S4 domain-containing protein [Caulobacter segnis ATCC
           21756]
 gi|295429537|gb|ADG08709.1| RNA-binding S4 domain protein [Caulobacter segnis ATCC 21756]
          Length = 426

 Score = 44.4 bits (104), Expect = 0.037,   Method: Composition-based stats.
 Identities = 11/50 (22%), Positives = 24/50 (48%), Gaps = 1/50 (2%)

Query: 348 RGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
            G  +   + +AG   S  E  R +++  + IN  +++   +++K  DF 
Sbjct: 24  PGERVAKALARAG-VASRREVERLIEAGRVAINGKVLTTPAIKVKPGDFL 72


>gi|55731324|emb|CAH92376.1| hypothetical protein [Pongo abelii]
          Length = 472

 Score = 44.4 bits (104), Expect = 0.038,   Method: Composition-based stats.
 Identities = 39/248 (15%), Positives = 84/248 (33%), Gaps = 31/248 (12%)

Query: 15  RGFIHQISN-PRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +  + LD   ++     Y G   ++ ++H GHL   +   WLQ   + P+ +
Sbjct: 135 RGIFFSHRDMNQVLDAYENKKPFYLYTGRSPSSEAMHVGHLIPFIFTKWLQDVFNVPLVI 194

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                         D+ + + +   + +            I  G       + ++  ++ 
Sbjct: 195 -----------QMTDDEKYLWKDLTLDQAYSYAVENAKDIIACGFDINKTFIFSDLDYMG 243

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA-----YDFVELA 188
                   + +     + + ++F  V+       S    + ++  +QA       F ++ 
Sbjct: 244 --MSSGFYKNV---VKIQKHVTFSQVKGIFGFTDSDCIGKISFPAIQAAPSFSNSFPQIF 298

Query: 189 K---NYDCRLQMGGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTASGTKMGKTLS 242
           +   +  C +     DQ        D+  R+  PK   L +   P L  A  TKM  +  
Sbjct: 299 RDRTDIQCLIPC-AIDQDPYFRMTRDVAPRIGYPKPALLHSTFFPALQGAQ-TKMSASDP 356

Query: 243 G-AIWLNK 249
             +I+L  
Sbjct: 357 NSSIFLTD 364


>gi|15892428|ref|NP_360142.1| lysyl-tRNA synthetase [Rickettsia conorii str. Malish 7]
 gi|15619581|gb|AAL03043.1| lysyl-tRNA synthetase [Rickettsia conorii str. Malish 7]
          Length = 527

 Score = 44.4 bits (104), Expect = 0.038,   Method: Composition-based stats.
 Identities = 22/135 (16%), Positives = 41/135 (30%), Gaps = 8/135 (5%)

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            DF           +M G D   N     ++   L       L   L    +G K+ K+ 
Sbjct: 241 PDFGMRWAALKVDYEMYGKDHLANARLYSEICRILGGKPPVQLCYELFLDENGKKISKSK 300

Query: 242 SGAIWLNK-EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINE 297
             +I ++     +P      +      +     +    +    +D       K   E + 
Sbjct: 301 GNSISIDDWLKYAPVESMALFMY---QNPTRAKRLFFDVIPKNVDEYITFNQKYHLEEDR 357

Query: 298 AKKIIATEITTMVHG 312
           AK+  A  +  + HG
Sbjct: 358 AKR-FANPVYHIHHG 371


>gi|300779713|ref|ZP_07089569.1| tryptophan--tRNA ligase [Corynebacterium genitalium ATCC 33030]
 gi|300533823|gb|EFK54882.1| tryptophan--tRNA ligase [Corynebacterium genitalium ATCC 33030]
          Length = 342

 Score = 44.4 bits (104), Expect = 0.038,   Method: Composition-based stats.
 Identities = 42/258 (16%), Positives = 85/258 (32%), Gaps = 37/258 (14%)

Query: 33  QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRR 92
                   G   TA S H G+    +  +   +  +     +    +I  D +       
Sbjct: 8   DEKQRVLSGIQPTADSYHLGNYLGALKQWIDLQDSYDAFYFIPDLHAITVDQNP-----E 62

Query: 93  MMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNR 152
            +R++ I    + I       +     K+   + ++      + +  +L+ +  F   +R
Sbjct: 63  ELRTRTIAGCAQLIA------LGIDPEKSTLFVQSHVPEHAELTW--VLQCLTGFGEASR 114

Query: 153 MLS-FESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGID 211
           M    +    + +   S+    F Y +L A D + L   +   +   G DQ  ++     
Sbjct: 115 MTQFKDKSAKQGQDRTSVGL--FTYPMLMAADIL-LYSPHLVPV---GEDQRQHLELTRT 168

Query: 212 LGERLKTPKLFALTSPLLTT--ASG-----------TKMGKTLSGAIWLNKEMTSPYNFW 258
           L ER  +   F  T  +       G            KM K+ S    +   +  P    
Sbjct: 169 LAERFNSR--FGETFVVPEGFIPEGSAKIYDLQEPTAKMSKSGSNPKGIINLLDEPKTSA 226

Query: 259 QYWRN--IDDADVVSFAK 274
           +  R+   DD  V++F +
Sbjct: 227 KRIRSAVTDDDGVIAFDR 244


>gi|302784845|ref|XP_002974194.1| hypothetical protein SELMODRAFT_442375 [Selaginella moellendorffii]
 gi|300157792|gb|EFJ24416.1| hypothetical protein SELMODRAFT_442375 [Selaginella moellendorffii]
          Length = 390

 Score = 44.0 bits (103), Expect = 0.039,   Method: Composition-based stats.
 Identities = 58/355 (16%), Positives = 103/355 (29%), Gaps = 55/355 (15%)

Query: 15  RGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +  + LD          Y G   ++ +LH GHL   M   +LQ     P+ +
Sbjct: 54  RGVFFAHRDFEKVLDSYEKGEKFYLYTGRGPSSEALHLGHLIPFMFTKYLQDAFKVPLVI 113

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                      +   E  + +  +  ++ I     I  +FI             N     
Sbjct: 114 QLTDDEKCMWKNLSVEETKRLARENAKDIIACGFDISRTFIFSDFQYVGRGFYEN----- 168

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA-----YDFVELA 188
                          S+ + ++F  V+     +      +  +  +QA       F  L 
Sbjct: 169 -------------MISIAKSVTFNQVKGIFGFDGESHIGKIFFPAVQAAPSFPTSFPHLF 215

Query: 189 ---KNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALT--SPLLTTASGTKMGKTLS 242
                  C +     DQ        D+  RL         +   P L   SG KM  + +
Sbjct: 216 GTKSKIKCLIPC-AIDQDPYFRMTRDVAPRLGYQKPALIESRFFPALQGESG-KMSASDT 273

Query: 243 G-AIWL-NKEMTSPYNFWQYWR---------------NIDDADVVSFAKRLTTLPMSEID 285
             AI++ + +         Y                 N+       +          E++
Sbjct: 274 NSAIYVKDTQKEIKKKIANYALSGGGDTKELQRKNGANLKVDIPFKYLTFFLD-DDEELE 332

Query: 286 RMAKLQGKEIN---EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMP 337
           R+    G       E K I++  +  MV   ++A  A     E  D  +  + MP
Sbjct: 333 RIRDEYGSGRMLTGEIKNILSDVLWKMVEQHQQARLAV--TEEMVDAFMAPREMP 385


>gi|57090365|ref|XP_537554.1| PREDICTED: similar to Tryptophanyl-tRNA synthetase
           (Tryptophan--tRNA ligase) (TrpRS) (IFP53) (hWRS) isoform
           1 [Canis familiaris]
          Length = 476

 Score = 44.0 bits (103), Expect = 0.039,   Method: Composition-based stats.
 Identities = 40/248 (16%), Positives = 85/248 (34%), Gaps = 31/248 (12%)

Query: 15  RGFIHQISN-PRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +  + LD   ++     Y G   ++ ++H GHL   +   WLQ   + P+ +
Sbjct: 139 RGIFFSHRDMNQILDAYENKKPFYLYTGRGPSSEAMHVGHLIPFIFTKWLQDVFNVPLVI 198

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                         D+ + + +   + +            I  G       + ++  ++ 
Sbjct: 199 -----------QMTDDEKYLWKDLTLDQAYGYAVENAKDIIACGFDIKKTFIFSDLDYMG 247

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA-----YDFVELA 188
                   + +     + + ++F  V+       S S  + ++  +QA       F ++ 
Sbjct: 248 --MSPGFYKNV---VKIQKHVTFNQVKGIFGFTDSDSIGKISFPAIQAAPSFSNSFPQIF 302

Query: 189 K---NYDCRLQMGGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTASGTKMGKTLS 242
           +   +  C +     DQ        D+  R+  PK   L +   P L  A  TKM  +  
Sbjct: 303 RDRTDIQCLIPC-AIDQDPYFRMTRDVAPRIGYPKPALLHSTFFPALQGAQ-TKMSASDP 360

Query: 243 G-AIWLNK 249
             +I+L  
Sbjct: 361 NSSIFLTD 368


>gi|225012502|ref|ZP_03702938.1| tryptophanyl-tRNA synthetase [Flavobacteria bacterium MS024-2A]
 gi|225003479|gb|EEG41453.1| tryptophanyl-tRNA synthetase [Flavobacteria bacterium MS024-2A]
          Length = 322

 Score = 44.0 bits (103), Expect = 0.039,   Method: Composition-based stats.
 Identities = 25/135 (18%), Positives = 45/135 (33%), Gaps = 19/135 (14%)

Query: 147 FFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNI 206
           FF   R+    S + + ++   ++   F+Y +L A D +     YD  +   G DQ  ++
Sbjct: 98  FFPYQRLTLAHSFKDKSEQLSDINAGLFSYPMLMAADILL----YDAEIVPVGKDQLQHL 153

Query: 207 ICGIDLGERLKTPKLFALTSPL-----------LTTASGTKMGKTLSG--AIWLNKEMTS 253
               D+  R         T  L           +    G KM K+      I+L ++   
Sbjct: 154 EITRDVAARFN--HQMGETFVLPQAKIQESSQYVPGTDGEKMSKSKENTINIFLPEKKLR 211

Query: 254 PYNFWQYWRNIDDAD 268
                    +    D
Sbjct: 212 KQIMGIKTDSTPVED 226


>gi|157828378|ref|YP_001494620.1| lysyl-tRNA synthetase [Rickettsia rickettsii str. 'Sheila Smith']
 gi|165933085|ref|YP_001649874.1| lysyl-tRNA synthetase [Rickettsia rickettsii str. Iowa]
 gi|166229823|sp|A8GRT7|SYK_RICRS RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|189082964|sp|B0BX92|SYK_RICRO RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|157800859|gb|ABV76112.1| lysyl-tRNA synthetase [Rickettsia rickettsii str. 'Sheila Smith']
 gi|165908172|gb|ABY72468.1| class 1 lysyl-tRNA synthetase [Rickettsia rickettsii str. Iowa]
          Length = 522

 Score = 44.0 bits (103), Expect = 0.039,   Method: Composition-based stats.
 Identities = 22/135 (16%), Positives = 42/135 (31%), Gaps = 8/135 (5%)

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            DF           +M G D   N     ++   L       L   L    +G K+ K+ 
Sbjct: 236 PDFGMRWAALKVDYEMYGKDHLANARLYSEICRILGGKPPVQLCYELFLDENGEKISKSK 295

Query: 242 SGAIWLNK-EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINE 297
             +I ++     +P      +      +     +    +    +D       K   E + 
Sbjct: 296 GNSISIDDWLKYAPVESMALFMY---QNPTRAKRLFFDVIPKNVDEYITFNQKYHLEEDR 352

Query: 298 AKKIIATEITTMVHG 312
           AK++ A  +  + HG
Sbjct: 353 AKRV-ANPVYHIHHG 366


>gi|325851841|ref|ZP_08171006.1| pseudouridylate synthase [Prevotella denticola CRIS 18C-A]
 gi|325484683|gb|EGC87596.1| pseudouridylate synthase [Prevotella denticola CRIS 18C-A]
          Length = 507

 Score = 44.0 bits (103), Expect = 0.039,   Method: Composition-based stats.
 Identities = 13/74 (17%), Positives = 29/74 (39%), Gaps = 1/74 (1%)

Query: 342 SKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
              + +  + L   +  AG   S  EA   + S A+ +N  ++     ++   D      
Sbjct: 264 ENFDPNEPIRLNKYLANAGVC-SRREADEFILSGAVTVNGEVVKELGSKVLRSDVVLFQE 322

Query: 402 IKLSFGKKNHIICH 415
             +S  KK +++ +
Sbjct: 323 KPVSLEKKVYVLLN 336


>gi|85680329|gb|ABC72358.1| tryptophanyl-tRNA synthetase [Haloquadratum walsbyi]
          Length = 606

 Score = 44.0 bits (103), Expect = 0.039,   Method: Composition-based stats.
 Identities = 36/224 (16%), Positives = 62/224 (27%), Gaps = 41/224 (18%)

Query: 12  LSERGFIHQISNPRELDILC-SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           L  RG I        +     +   V    G+  T    H GH      + W Q+ G   
Sbjct: 109 LMRRGVIFGHRGYDPVAEALQNNDPVAVLSGFMPTGDP-HIGHKLVFDEIIWHQQRGADA 167

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
            +L+    +            R +   EI ++         S +  G       +     
Sbjct: 168 YALIADLEAHAA---------RGLSWSEIDDHARDY---LLSLLALGFDPESGELYRQSE 215

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLS--------FLEFNYMILQAY 182
              + +  D   E+GS         FE +      E +++          +  Y  L+  
Sbjct: 216 ---NRELQDFAFELGSK---ANFSEFEGIYG-FDSETNVAYMQSVITQMADILYPQLEEP 268

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDL---GERLKTPKLFA 223
               +           G DQ  ++    DL       K  K +A
Sbjct: 269 KPTVI---------PVGPDQDPHVRFARDLAARMRFFKVTKAYA 303


>gi|329962615|ref|ZP_08300563.1| tryptophan--tRNA ligase [Bacteroides fluxus YIT 12057]
 gi|328529646|gb|EGF56544.1| tryptophan--tRNA ligase [Bacteroides fluxus YIT 12057]
          Length = 380

 Score = 44.0 bits (103), Expect = 0.040,   Method: Composition-based stats.
 Identities = 41/247 (16%), Positives = 70/247 (28%), Gaps = 46/247 (18%)

Query: 44  LTASSLHAGHLTQLMLLFW---LQKTGH--KPISLMGGGTSIIGDPSFRDESRRMMRSQE 98
            T   LH GH      L     LQ +G   K    +    ++         +  M   ++
Sbjct: 29  PTGR-LHIGHYVG--SLRRRVELQNSGLYDKTFVFIADAQAL---------TDNMENPEK 76

Query: 99  IQENIEKIKGIFSSFIKY-----GTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRM 153
           +++N+          + Y        K+   + +    LC + +  +     S    N  
Sbjct: 77  VRQNV------IEVALDYLACGLDPTKSTIFIQSQIPELCELTFYYMDLVTVSRLQRNPT 130

Query: 154 LSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLG 213
           +  E      +    + F  F Y I QA D     +     +   G DQ   I    ++ 
Sbjct: 131 VKTEIQMRNFETSIPVGF--FTYPISQAADITA-FRATTVPV---GEDQEPMIEQAREIV 184

Query: 214 ERLK-------TPKLFALTSPL----LTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYW 261
            R               L        L    G  KM K+L   I+L+          +  
Sbjct: 185 RRFNYIYGETLVEPEILLPDNAACLRLPGTDGKAKMSKSLGNCIYLSDTADEVQKKVKSM 244

Query: 262 RNIDDAD 268
               D  
Sbjct: 245 YTDPDHL 251


>gi|257887552|ref|ZP_05667205.1| tryptophanyl-tRNA synthetase [Enterococcus faecium 1,141,733]
 gi|257896046|ref|ZP_05675699.1| tryptophanyl-tRNA synthetase [Enterococcus faecium Com12]
 gi|293378782|ref|ZP_06624939.1| tryptophan--tRNA ligase [Enterococcus faecium PC4.1]
 gi|257823606|gb|EEV50538.1| tryptophanyl-tRNA synthetase [Enterococcus faecium 1,141,733]
 gi|257832611|gb|EEV59032.1| tryptophanyl-tRNA synthetase [Enterococcus faecium Com12]
 gi|292642575|gb|EFF60728.1| tryptophan--tRNA ligase [Enterococcus faecium PC4.1]
          Length = 336

 Score = 44.0 bits (103), Expect = 0.040,   Method: Composition-based stats.
 Identities = 54/342 (15%), Positives = 100/342 (29%), Gaps = 53/342 (15%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
            T   LH GH    +      +        +     +I D      +      +++  N+
Sbjct: 11  PTGK-LHLGHYVGSLKTRVAMQADEDNQLFV-----MIADMQ--ALTDNAKNPEKVSSNV 62

Query: 104 EKIKGIFSSFIKY-----GTGKTDALMLNNETWLCSIKYIDL-LREIGSFFSVNRMLSFE 157
                     + Y        K+   + +    L  +    L L  +G     N  +  E
Sbjct: 63  ------LQVALDYLAVGLDPAKSTLFIQSQIPELAELTMYYLNLVSVGR-VRRNPTVKTE 115

Query: 158 SVRSRLKREQSLSFLEFNYMILQAYDFVELAKN--------YDCRLQMGGSDQWGNIICG 209
             + +        F  F Y + QA D      N             Q     Q  N   G
Sbjct: 116 IEQKKFGESVPTGF--FIYPVSQAADITAFKANLVPVGEDQKPMLEQTQEIVQSFNHTYG 173

Query: 210 IDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKE----MTSPYNFW------ 258
             L E         +    L    G  KM K+L   I+++           + +      
Sbjct: 174 EVLVEPKGVFPPKGMGR--LPGIDGNGKMSKSLGNGIYISDPADVLKKKVMSMYTDPNHI 231

Query: 259 --QYWRNIDDADVVSFAKRL-TTLP-MSEIDRMAKLQGKEINEAKKIIAT----EITTMV 310
             Q    ++   V ++     T    + E+    +  G    + K+ +      E   + 
Sbjct: 232 HVQDPGQVEGNMVFTYLDVFGTDKEAIEEMKAHYRRGGLGDVKIKRYLIDVLEAEFAPIR 291

Query: 311 HGREEAEKAATAAME-CFDMSIHSQHMPTISISKDEVSRGMG 351
             REE EK  +A ME     S  +  +   ++S+ + + G+ 
Sbjct: 292 ARREELEKDPSAVMEILRKGSEEAAKVAAQTLSEVKSAMGIN 333


>gi|160914096|ref|ZP_02076321.1| hypothetical protein EUBDOL_00107 [Eubacterium dolichum DSM 3991]
 gi|158434013|gb|EDP12302.1| hypothetical protein EUBDOL_00107 [Eubacterium dolichum DSM 3991]
          Length = 328

 Score = 44.0 bits (103), Expect = 0.040,   Method: Composition-based stats.
 Identities = 48/292 (16%), Positives = 88/292 (30%), Gaps = 47/292 (16%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   T   L  G+    +  F   +  +     +    + I  P  R E  +      I 
Sbjct: 7   GIKPTGR-LTLGNYIGAIRNFVAYQEDYDMYVFIANLHA-ITVPIERAEL-KQNTKDLIA 63

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFS-VNRMLSFESV 159
             +             G     A +      L     +  +    S+   + RM  ++  
Sbjct: 64  LYLAC-----------GLDPKKATIFLQSD-LHEHAELGWILTCNSYVGELQRMTQYKD- 110

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT- 218
               K E  ++   F Y  L A D +    +Y   + +G  DQ  ++    DL ER    
Sbjct: 111 -KTAKGETGITAGLFTYPSLMAADILLYDADY---VPVG-VDQKQHVELTRDLAERFNHR 165

Query: 219 -PKLFALTSPLLTTASGT---------KMGKTLSGAIWLNKEMTSPYNFWQYWRN-IDDA 267
               F +  PL+               KM K+          +  P    +   + + D+
Sbjct: 166 YGDTFTVPEPLVAKVGAKVYSLQDPRKKMSKSEDNPKGTIDLLDEPSVARKKIMSAVTDS 225

Query: 268 D------------VVSFAKRLTTLPMSEIDRM-AKLQGKEINEAKKIIATEI 306
                        + +    L++L    I+ + A+  GK   E KK +   +
Sbjct: 226 IGIIQYDPEQQPGISNLLTILSSLNNETIEDIVARYAGKGYGEFKKEVGECV 277


>gi|146345526|sp|Q5R4J1|SYWC_PONAB RecName: Full=Tryptophanyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Tryptophan--tRNA ligase; Short=TrpRS; Contains:
           RecName: Full=T1-TrpRS; Contains: RecName: Full=T2-TrpRS
          Length = 472

 Score = 44.0 bits (103), Expect = 0.040,   Method: Composition-based stats.
 Identities = 39/248 (15%), Positives = 84/248 (33%), Gaps = 31/248 (12%)

Query: 15  RGFIHQISN-PRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +  + LD   ++     Y G   ++ ++H GHL   +   WLQ   + P+ +
Sbjct: 135 RGIFFSHRDMNQVLDAYENKKPFYLYTGRGPSSEAMHVGHLIPFIFTKWLQDVFNVPLVI 194

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                         D+ + + +   + +            I  G       + ++  ++ 
Sbjct: 195 -----------QMTDDEKYLWKDLTLDQAYSYAVENAKDIIACGFDINKTFIFSDLDYMG 243

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA-----YDFVELA 188
                   + +     + + ++F  V+       S    + ++  +QA       F ++ 
Sbjct: 244 --MSSGFYKNV---VKIQKHVTFNQVKGIFGFTDSDCIGKISFPAIQAAPSFSNSFPQIF 298

Query: 189 K---NYDCRLQMGGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTASGTKMGKTLS 242
           +   +  C +     DQ        D+  R+  PK   L +   P L  A  TKM  +  
Sbjct: 299 RDRTDIQCLIPC-AIDQDPYFRMTRDVAPRIGYPKPALLHSTFFPALQGAQ-TKMSASDP 356

Query: 243 G-AIWLNK 249
             +I+L  
Sbjct: 357 NSSIFLTD 364


>gi|327312548|ref|YP_004327985.1| pseudouridylate synthase [Prevotella denticola F0289]
 gi|326945115|gb|AEA21000.1| pseudouridylate synthase [Prevotella denticola F0289]
          Length = 507

 Score = 44.0 bits (103), Expect = 0.040,   Method: Composition-based stats.
 Identities = 13/74 (17%), Positives = 29/74 (39%), Gaps = 1/74 (1%)

Query: 342 SKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
              + +  + L   +  AG   S  EA   + S A+ +N  ++     ++   D      
Sbjct: 264 ENFDPNEPIRLNKYLANAGVC-SRREADEFILSGAVTVNGEVVKELGSKVLRSDVVLFQE 322

Query: 402 IKLSFGKKNHIICH 415
             +S  KK +++ +
Sbjct: 323 KPVSLEKKVYVLLN 336


>gi|325261537|ref|ZP_08128275.1| tryptophan--tRNA ligase [Clostridium sp. D5]
 gi|324032991|gb|EGB94268.1| tryptophan--tRNA ligase [Clostridium sp. D5]
          Length = 361

 Score = 44.0 bits (103), Expect = 0.040,   Method: Composition-based stats.
 Identities = 47/266 (17%), Positives = 77/266 (28%), Gaps = 44/266 (16%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     LQ  G    I +M      + D +   E  R    +   +
Sbjct: 11  PTGR-LHVGHYVGSLKRRVELQNAGEFDDIFVMIADAQALTDNADNPEKVRQNIIEVALD 69

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
            +                K+   + +    LC + +  +     S    N  +  E    
Sbjct: 70  YLACG---------LDPAKSTLFIQSQIPELCELSFYYMNLVTVSRLQRNPTVKSEIQMR 120

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQ------------WGNIICG 209
             +    + F  F Y I QA D           + +G  DQ              N + G
Sbjct: 121 NFEASIPVGF--FTYPISQAADITAFKA---TTVPVG-EDQLPMLEQTKEIVRKFNSVYG 174

Query: 210 IDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADV 269
             L E             L  T    KM K+L+  I+L++E               D+  
Sbjct: 175 DTLVEPDILLPDNTACLRLPGTDGKAKMSKSLNNCIYLSEE--------------PDSIK 220

Query: 270 VSFAKRLTTLPMSEIDRMAKLQGKEI 295
                  T     +++   KL+G  +
Sbjct: 221 QKVFSMFTDPTHIKVEDPGKLEGNTV 246


>gi|307546408|ref|YP_003898887.1| tryptophanyl-tRNA synthetase [Halomonas elongata DSM 2581]
 gi|307218432|emb|CBV43702.1| tryptophanyl-tRNA synthetase [Halomonas elongata DSM 2581]
          Length = 398

 Score = 44.0 bits (103), Expect = 0.040,   Method: Composition-based stats.
 Identities = 42/254 (16%), Positives = 74/254 (29%), Gaps = 39/254 (15%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLML--LFWLQKTGHK 69
           L  R F  Q S      +  +        G   T +  H G+    +   +   Q    +
Sbjct: 44  LPWRAFQSQQSPAF---MTAASDKTRVLTGITTTGTP-HLGNYVGAIKPAIAASQDPSVQ 99

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
               +    ++I     +   R      EI              +  G    +A+     
Sbjct: 100 SYYFLADLHALIKSQDPK---RVQQSRLEIAATW----------LALGLDTDNAIFYRQS 146

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLS-FESVRSRLKREQS-----LSFLEFNYMILQAYD 183
                 +   +L  + +   +NR  +   +V              ++   F+Y +L A D
Sbjct: 147 DIPEIPELTWMLSCVCAKGLMNRAHAYKAAVADNETAGNPDPDKGVTMGLFSYPVLMAAD 206

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDL-GERLKTPKLFALTSP---------LLTTAS 233
            +        R+ +G  DQ  +I    D+ G      K    T P         +L    
Sbjct: 207 ILMFNAQ---RVPVG-RDQIQHIEMARDMAGRFNHLFKGQYFTLPDAVVDERVEVLGGLD 262

Query: 234 GTKMGKTLSGAIWL 247
           G KM K+    I L
Sbjct: 263 GRKMSKSYDNTIPL 276


>gi|113931542|ref|NP_001039220.1| tryptophanyl-tRNA synthetase [Xenopus (Silurana) tropicalis]
 gi|89272489|emb|CAJ82616.1| tryptophanyl-tRNA synthetase [Xenopus (Silurana) tropicalis]
 gi|189441894|gb|AAI67428.1| LOC734080 protein [Xenopus (Silurana) tropicalis]
          Length = 475

 Score = 44.0 bits (103), Expect = 0.040,   Method: Composition-based stats.
 Identities = 49/346 (14%), Positives = 109/346 (31%), Gaps = 52/346 (15%)

Query: 15  RGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +  + LD    +     Y G   ++ ++H GHL   +   WLQ+  + P+ +
Sbjct: 139 RGIFFSHRDMHQVLDAYEKKQPFYLYTGRGPSSEAMHMGHLIPFIFTKWLQEVFNVPLVI 198

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                         D+ + + +   I++  +         I  G       + ++  ++ 
Sbjct: 199 -----------QLTDDEKYLWKDLTIEKAYQYAVENAKDIIALGFDVNKTFIFSDLEYMG 247

Query: 134 S-IKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA--------YDF 184
             + +   + ++    + N+      V+       S    + ++  +QA         + 
Sbjct: 248 KSLGFYQNVVKVQKHVTFNQ------VKGIFGFTDSDCIGKISFPAIQAAPSFSSSFPEI 301

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKL---FALTSPLLTTASGTKMGKTL 241
            +  K+  C +     DQ        D+  R+  PK     +   P L  A  TKM  + 
Sbjct: 302 FKGRKDIQCLIPC-AIDQDPYFRMTRDVAPRISYPKPALMHSTFFPALQGAQ-TKMSASD 359

Query: 242 SG-AIWLNKE----------------MTSPYNFWQYWRNIDDADVVSFAKRL--TTLPMS 282
              +I+L                     +     Q+  N +      +          + 
Sbjct: 360 PNSSIFLTDTPKQIKTKINKHAFSGGKDTVEEHRQFGGNWEVDVSYMYLTFFLEDDERLE 419

Query: 283 EIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEK-AATAAMECF 327
           +I +          E KK++   +  M+   +E  K      ++ F
Sbjct: 420 QIKQDYSSGALLTGELKKLLIETLQPMIAAHQERRKHVTEETVKQF 465


>gi|329767515|ref|ZP_08259038.1| tryptophanyl-tRNA synthetase [Gemella haemolysans M341]
 gi|328835849|gb|EGF85571.1| tryptophanyl-tRNA synthetase [Gemella haemolysans M341]
          Length = 337

 Score = 44.0 bits (103), Expect = 0.041,   Method: Composition-based stats.
 Identities = 43/341 (12%), Positives = 96/341 (28%), Gaps = 50/341 (14%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKT--GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +      +     +   ++    ++  +    D   +++  + I E
Sbjct: 11  PTGK-LHLGHYVGSLKNRIALQNEDDTEVFIMIADQQALTDNA---DNPGKVI--ENITE 64

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
                  +          KT   + +    L  +    +     S    N  +  E    
Sbjct: 65  VALDYLAVG-----IDPSKTTIFIQSQIPQLAELYMYYMNLVSVSRLHRNPTVKQEINDK 119

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK---T 218
           +        F  F Y + QA D       +   + +G  DQ   +    ++         
Sbjct: 120 KFGESIPAGF--FTYPVSQAADITAFKATH---VPVG-EDQKPMLEQTREIVRDFNRTYN 173

Query: 219 PKLFALTSPLLT--------TASGT-KMGKTLSGAIWLNKEMTSPYNFWQYW------RN 263
            ++  L   +L            G  KM K+L+  I+L     +                
Sbjct: 174 KEVLVLPEIVLPPKNHARLVGIDGQGKMSKSLNNGIYLGDSEENIKAKIMKMYTDPNHIK 233

Query: 264 IDD------ADVVSFAKRLTTLPMS--EIDRMAKLQGKEINEAKKIIATEITTMV----- 310
           I+D        V ++     +      E+       G    + K+ +   +   +     
Sbjct: 234 IEDPGQVEGNVVFTYLDIFDSRTDEVVELKEHYSRGGLGDMKLKRRLNDVMQDYLRPIRE 293

Query: 311 HGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMG 351
              E A+  A         S  ++ +   ++ + + + G+ 
Sbjct: 294 RREEFAKDKAEVYRMLKAGSEKAERVAAATLDEVKDAMGIN 334


>gi|293381480|ref|ZP_06627475.1| tryptophan--tRNA ligase [Lactobacillus crispatus 214-1]
 gi|290921950|gb|EFD98957.1| tryptophan--tRNA ligase [Lactobacillus crispatus 214-1]
          Length = 340

 Score = 44.0 bits (103), Expect = 0.041,   Method: Composition-based stats.
 Identities = 37/222 (16%), Positives = 67/222 (30%), Gaps = 31/222 (13%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     LQ +G + P  ++    ++  +    ++ R  +    +  
Sbjct: 12  PTGK-LHIGHYIGSLKNRVKLQNSGKYDPYIMIADTQALTDNARNPEKIRNSLIQVALDY 70

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
               I             K+   + +    L  +    +     +    N  +  E  + 
Sbjct: 71  LAVGI----------DPAKSTIYVQSQIPALFELTAYYMDLVTVARLERNPTVKTEIKQK 120

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP-K 220
             K    + FL  NY + QA D       +   +   G DQ   +    ++         
Sbjct: 121 DFKDSIPIGFL--NYPVSQAADITA----FKATVIPVGDDQEPMLEQTREIVRTFNRVYN 174

Query: 221 LFALTSPL----------LTTASGT-KMGKTLSGAIWLNKEM 251
              L  P           L    G  KM K+L  AI+L  + 
Sbjct: 175 CDVLVEPKGYFPPKGQGRLPGLDGNAKMSKSLGNAIYLADDA 216


>gi|170290001|ref|YP_001736817.1| aminoacyl-tRNA synthetase class Ib [Candidatus Korarchaeum
           cryptofilum OPF8]
 gi|170174081|gb|ACB07134.1| aminoacyl-tRNA synthetase class Ib [Candidatus Korarchaeum
           cryptofilum OPF8]
          Length = 336

 Score = 44.0 bits (103), Expect = 0.041,   Method: Composition-based stats.
 Identities = 49/272 (18%), Positives = 96/272 (35%), Gaps = 36/272 (13%)

Query: 49  LHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI-EKIK 107
           +H G+L  LML  ++Q+  + P+         I D   +   R  +  +E++    E I 
Sbjct: 88  IHIGNLVPLMLAKFIQEKLNSPLYF------QISDDE-KYSLRPDLSFREVRRWARENIV 140

Query: 108 GIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ 167
            + +    +  G    +  +  +WL     I     I     +  + SF      +K + 
Sbjct: 141 DVLA----FFDGNVKIIWDSESSWLYPASLI-----IAKKLRIAELKSF------IKLDD 185

Query: 168 SLSFLEFNYMILQ---AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFAL 224
           + +     Y +LQ   A  F      Y C + M   DQ   ++  +    RL   +   +
Sbjct: 186 TSNPAILYYALLQSLPALMFQLFGGKYRCIVPM-AVDQHPLMMPSLIAARRLGLEEPALI 244

Query: 225 TSPLLTTASGT-KMGKTL-SGAIWLNKEMTSPYNFWQYWRNIDDADV---VSFAKRL-TT 278
            S  L   +G  KMG +  S AI+L     S             +++   + + +   T 
Sbjct: 245 HSVFLPGINGEPKMGTSDPSSAIFLTDAADSVSE---KIDRSSCSELPPSLHYLRAFDTQ 301

Query: 279 LPMSEIDRMAKLQGKEINEAKKIIATEITTMV 310
                +    + +     EAK+     +  ++
Sbjct: 302 GYEDALASYIENKAYGCEEAKRRAKEILINLI 333


>gi|55733286|emb|CAH93325.1| hypothetical protein [Pongo abelii]
          Length = 472

 Score = 44.0 bits (103), Expect = 0.041,   Method: Composition-based stats.
 Identities = 39/248 (15%), Positives = 84/248 (33%), Gaps = 31/248 (12%)

Query: 15  RGFIHQISN-PRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +  + LD   ++     Y G   ++ ++H GHL   +   WLQ   + P+ +
Sbjct: 135 RGIFFSHRDMNQVLDAYENKKPFYLYTGRGPSSEAMHVGHLIPFIFTKWLQDVFNVPLVI 194

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                         D+ + + +   + +            I  G       + ++  ++ 
Sbjct: 195 -----------QMTDDEKYLWKDLTLDQAYSYAVENAKDIIACGFDINKTFIFSDLDYMG 243

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA-----YDFVELA 188
                   + +     + + ++F  V+       S    + ++  +QA       F ++ 
Sbjct: 244 --MSSGFYKNV---VKIQKHVTFNQVKGIFGFTDSDCIGKISFPAIQAAPSFSNSFPQIF 298

Query: 189 K---NYDCRLQMGGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTASGTKMGKTLS 242
           +   +  C +     DQ        D+  R+  PK   L +   P L  A  TKM  +  
Sbjct: 299 RDRTDIQCLIPC-AIDQDPYFRMTRDVAPRIGYPKLALLHSTFFPALQGAQ-TKMSASDP 356

Query: 243 G-AIWLNK 249
             +I+L  
Sbjct: 357 NSSIFLTD 364


>gi|293563132|ref|ZP_06677597.1| tryptophanyl-tRNA synthetase [Enterococcus faecium E1162]
 gi|291604910|gb|EFF34379.1| tryptophanyl-tRNA synthetase [Enterococcus faecium E1162]
          Length = 336

 Score = 44.0 bits (103), Expect = 0.041,   Method: Composition-based stats.
 Identities = 55/346 (15%), Positives = 101/346 (29%), Gaps = 61/346 (17%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
            T   LH GH    +      +        +     +I D      +      +++  N+
Sbjct: 11  PTGK-LHLGHYVGSLKTRVAMQADEDNQLFV-----MIADMQ--ALTDNAKNPEKVSSNV 62

Query: 104 EKIKGIFSSFIKY-----GTGKTDALMLNNETWLCSIKYIDL-LREIGSFFSVNRMLSFE 157
                     + Y        K+   + +    L  +    L L  +G     N  +  E
Sbjct: 63  ------LQVALDYLAVGLDPAKSTLFIQSQIPELDELTMYYLNLVSVGR-VRRNPTVKTE 115

Query: 158 SVRSRLKREQSLSFLEFNYMILQAYDFVELAKN--------YDCRLQMGGSDQWGNIICG 209
             + +        F  F Y + QA D      N             Q     Q  N   G
Sbjct: 116 IEQKKFGESVPTGF--FIYPVSQAADITAFKANLVPVGEDQKPMLEQTQEIVQSFNHTYG 173

Query: 210 IDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQ-YWRN---- 263
             L E         +    L    G  KM K+L   I+++     P +  Q    +    
Sbjct: 174 EVLVEPKGVFPPKGMGR--LPGIDGNGKMSKSLGNGIYISD----PADVLQKKVMSMYTD 227

Query: 264 -----------IDDADVVSFAKRL-TTLP-MSEIDRMAKLQGKEINEAKKIIAT----EI 306
                      ++   V ++     T    + E+    +  G    + K+ +      E 
Sbjct: 228 PNHIHVQDPGQVEGNMVFTYLDVFGTDKEAIEEMKAHYRRGGLGDVKIKRYLIDVLEAEF 287

Query: 307 TTMVHGREEAEKAATAAME-CFDMSIHSQHMPTISISKDEVSRGMG 351
             +   REE EK  +A ME     S  +  +   ++S+ + + G+ 
Sbjct: 288 APIRARREELEKDPSAVMEILRKGSEEAAKVAAQTLSEVKSAMGIN 333


>gi|87198612|ref|YP_495869.1| tryptophanyl-tRNA synthetase [Novosphingobium aromaticivorans DSM
           12444]
 gi|87134293|gb|ABD25035.1| tryptophanyl-tRNA synthetase [Novosphingobium aromaticivorans DSM
           12444]
          Length = 339

 Score = 44.0 bits (103), Expect = 0.041,   Method: Composition-based stats.
 Identities = 37/221 (16%), Positives = 68/221 (30%), Gaps = 42/221 (19%)

Query: 41  GYDLTASSLHAGHLT-QLMLLFWLQKT----GHKPISLMGGGTSIIGDPSFRDESRRMMR 95
           G   T + LH G+    +     +Q      G + +  +    + I  P    E      
Sbjct: 6   GIQPTGN-LHLGNYLGAIRNWVRMQDEWSAKGGECLYFLADLHA-ISMPHSPAEL-AANT 62

Query: 96  SQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLS 155
            + +   +        S + +   +  A       WL        L        +NRM  
Sbjct: 63  REMVAALVSCGIDPDKSVL-FNQAQVPAHAE--MQWL--------LNGTARMGWLNRMTQ 111

Query: 156 -FESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
             +         +  S   F Y +LQA D + L +     +   G DQ  ++    D+ +
Sbjct: 112 WKDKAGK---NREGASVALFTYPVLQAADVL-LYQATHVPV---GEDQKQHLELARDVAQ 164

Query: 215 RL------KTPKLFALTSPLLT--------TASG-TKMGKT 240
           +       +   +F L  P++            G  KM K+
Sbjct: 165 KFNNDFASEDAPVFTLPDPIIPPEAARIMSLRDGSAKMSKS 205


>gi|86605518|ref|YP_474281.1| S4 domain-containing protein [Synechococcus sp. JA-3-3Ab]
 gi|86554060|gb|ABC99018.1| S4 domain protein [Synechococcus sp. JA-3-3Ab]
          Length = 93

 Score = 44.0 bits (103), Expect = 0.041,   Method: Composition-based stats.
 Identities = 10/75 (13%), Positives = 28/75 (37%), Gaps = 3/75 (4%)

Query: 336 MPTISISKDEVSRGMGLLTL---IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
           M            G  L+ L   +   G   +  +A++ +++  +++N  + +    +++
Sbjct: 1   MAETLPPSQAPPAGDPLIKLDQFLKLTGVVPTGGQAKQLIQAGQVRVNGEVETRRGRKLR 60

Query: 393 LQDFDSTGNIKLSFG 407
           L D  +        G
Sbjct: 61  LGDEVAVAGQVWQVG 75


>gi|227877963|ref|ZP_03995967.1| tryptophanyl-tRNA synthetase II [Lactobacillus crispatus JV-V01]
 gi|256844343|ref|ZP_05549829.1| tryptophanyl-tRNA synthetase [Lactobacillus crispatus 125-2-CHN]
 gi|256849253|ref|ZP_05554686.1| tryptophanyl-tRNA synthetase II [Lactobacillus crispatus MV-1A-US]
 gi|262047268|ref|ZP_06020226.1| tryptophanyl-tRNA synthetase [Lactobacillus crispatus MV-3A-US]
 gi|295692074|ref|YP_003600684.1| tryptophanyl-tRNA synthetase [Lactobacillus crispatus ST1]
 gi|312978354|ref|ZP_07790096.1| tryptophan--tRNA ligase [Lactobacillus crispatus CTV-05]
 gi|227862433|gb|EEJ69948.1| tryptophanyl-tRNA synthetase II [Lactobacillus crispatus JV-V01]
 gi|256613421|gb|EEU18624.1| tryptophanyl-tRNA synthetase [Lactobacillus crispatus 125-2-CHN]
 gi|256714029|gb|EEU29017.1| tryptophanyl-tRNA synthetase II [Lactobacillus crispatus MV-1A-US]
 gi|260572513|gb|EEX29075.1| tryptophanyl-tRNA synthetase [Lactobacillus crispatus MV-3A-US]
 gi|295030180|emb|CBL49659.1| Tryptophanyl-tRNA synthetase [Lactobacillus crispatus ST1]
 gi|310894697|gb|EFQ43769.1| tryptophan--tRNA ligase [Lactobacillus crispatus CTV-05]
          Length = 340

 Score = 44.0 bits (103), Expect = 0.042,   Method: Composition-based stats.
 Identities = 37/222 (16%), Positives = 67/222 (30%), Gaps = 31/222 (13%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     LQ +G + P  ++    ++  +    ++ R  +    +  
Sbjct: 12  PTGK-LHIGHYIGSLKNRVKLQNSGKYDPYIMIADTQALTDNARNPEKIRNSLIQVALDY 70

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
               I             K+   + +    L  +    +     +    N  +  E  + 
Sbjct: 71  LAVGI----------DPAKSTIYVQSQIPALFELTAYYMDLVTVARLERNPTVKTEIKQK 120

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP-K 220
             K    + FL  NY + QA D       +   +   G DQ   +    ++         
Sbjct: 121 DFKDSIPIGFL--NYPVSQAADITA----FKATVIPVGDDQEPMLEQTREIVRTFNRVYN 174

Query: 221 LFALTSPL----------LTTASGT-KMGKTLSGAIWLNKEM 251
              L  P           L    G  KM K+L  AI+L  + 
Sbjct: 175 CDVLVEPKGYFPPKGQGRLPGLDGNAKMSKSLGNAIYLADDA 216


>gi|124514838|gb|EAY56350.1| Tryptophanyl-tRNA synthetase [Leptospirillum rubarum]
          Length = 355

 Score = 44.0 bits (103), Expect = 0.042,   Method: Composition-based stats.
 Identities = 52/361 (14%), Positives = 116/361 (32%), Gaps = 76/361 (21%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   +   LH G+    +  +   +  ++    +    ++  +       R     + + 
Sbjct: 30  GIQPSGR-LHLGNYMGALKNWIALQDRYESFFFIADWHALTTNYEDTSPIR-QNIREMLV 87

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           +            +  G       +         +++ +L   +     V+ +    S +
Sbjct: 88  DW-----------LSLGLDPEKCTIFLQSD---VLEHAELNLLLSMVTPVSWLERNPSYK 133

Query: 161 SRLKR--EQSLSFLEFN-YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK 217
            +  +   + LS   F  Y +L + D + L +     +   G DQ  ++    ++  RL+
Sbjct: 134 DQQTQITGRDLSTFGFLGYPVLMSADIL-LYRADHVPV---GLDQLPHLELAREIARRLR 189

Query: 218 T--PKLFALTSPLLT------TASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNI----- 264
                +     PLLT         G KM K+    I++     S    W   R +     
Sbjct: 190 HFYGPVVPEPLPLLTPTPRLLGLDGRKMSKSYKNCIYVG---DSSAEIWDKVRPMVTDPA 246

Query: 265 -------DDAD---VVSFAKRLT-TLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGR 313
                   D D   V +  +  +    + E+D+  +  G    + KK++   I T++   
Sbjct: 247 RVRRSDPGDPDKCPVFNLHQSFSPPETVQEVDKGCRTAGIGCIDCKKLLVGHIETILQPA 306

Query: 314 EEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLK 373
            E ++   +A + F                        L  ++ + G   S  EAR+ ++
Sbjct: 307 RE-KRQEISARKGF------------------------LKDVLQEGGKTAS-GEARQTIR 340

Query: 374 S 374
            
Sbjct: 341 E 341


>gi|296268656|ref|YP_003651288.1| tryptophanyl-tRNA synthetase [Thermobispora bispora DSM 43833]
 gi|296091443|gb|ADG87395.1| tryptophanyl-tRNA synthetase [Thermobispora bispora DSM 43833]
          Length = 337

 Score = 44.0 bits (103), Expect = 0.042,   Method: Composition-based stats.
 Identities = 30/187 (16%), Positives = 60/187 (32%), Gaps = 18/187 (9%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   TA S H G+    +  +   +  H+    +    ++   P   D  RR        
Sbjct: 9   GIQPTADSFHLGNYLGAVRQYVALQDTHEAFYFIADLHALTVSPKPEDLRRR-----TRV 63

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
              +               ++   + ++      + +I  L  +       RM  F+   
Sbjct: 64  AAAQLFAAGL------DPDRSTVFVQSHVREHTELAWI--LICLTGMGEAGRMTQFKDKS 115

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
           +++      +   F Y ILQA D + + +     +   G+DQ  ++    DL +R     
Sbjct: 116 AKVGEG-GTNVGLFTYPILQAADIL-MYQAEQVPV---GADQKQHLELSRDLAQRFNNRY 170

Query: 221 LFALTSP 227
                 P
Sbjct: 171 GQTFVVP 177


>gi|197251005|ref|YP_002149463.1| tryptophanyl-tRNA synthetase II [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|197214708|gb|ACH52105.1| tryptophanyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
          Length = 337

 Score = 44.0 bits (103), Expect = 0.042,   Method: Composition-based stats.
 Identities = 35/217 (16%), Positives = 63/217 (29%), Gaps = 29/217 (13%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMR-SQEIQEN 102
            T  SLH GH    +      +  H+   L+     +       D      +    I + 
Sbjct: 13  PTG-SLHLGHYVGSLRQRVALQQYHQQYVLIADLQGL------TDNGSNPQKIRDNIPQV 65

Query: 103 IEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR 162
           +     +           T   + +    L  +  + +     +    N  +  E  +  
Sbjct: 66  LADYLAVG-----IDPALTTICLQSALPALAELTVLYMNIVTVARVERNPTVKNEIAQKG 120

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT---- 218
             R   + F    Y I QA D       +   +   G DQ   I    ++  ++ +    
Sbjct: 121 FTRSLPVGF--MAYPISQAADITA----FKAEMVPVGDDQLPMIEQTNEIVHKMNSLFSS 174

Query: 219 ---PKLFALTSPL--LTTASG-TKMGKTLSGAIWLNK 249
                  AL S    L    G  KM K+L   + L+ 
Sbjct: 175 PVLRPCQALLSDTGRLPGIDGSAKMSKSLGNTLLLSA 211


>gi|322384514|ref|ZP_08058194.1| tryptophanyl-tRNA synthetase-like protein [Paenibacillus larvae
           subsp. larvae B-3650]
 gi|321150569|gb|EFX44046.1| tryptophanyl-tRNA synthetase-like protein [Paenibacillus larvae
           subsp. larvae B-3650]
          Length = 321

 Score = 44.0 bits (103), Expect = 0.042,   Method: Composition-based stats.
 Identities = 39/235 (16%), Positives = 81/235 (34%), Gaps = 38/235 (16%)

Query: 149 SVNRMLSFES---VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGN 205
           ++  M   E     + +   ++++    F Y  L A D +     Y+  L   G DQ  +
Sbjct: 88  TITYMGELERMTQFKDKSAGKETVGAGLFTYPSLMAADILL----YNADLIPVGEDQKQH 143

Query: 206 IICGIDLGERLKT--PKLFALTSPLLTTASG---------TKMGKTLSGAIWLNKEMTSP 254
           +    DL  R      + F +  P +    G          KM K+          +  P
Sbjct: 144 LELTRDLAARFNNRFGETFRMPDPYIPEVGGRIMSLDDASKKMSKSNPNKNSFITMLDEP 203

Query: 255 YNFWQYW-RNIDD---------------ADVVSFAKRLTTLPMSEIDRMAKLQGKEINEA 298
               +   R + D               ++++S     + L +++++  AK +G+     
Sbjct: 204 SVIRKKISRAVTDSGREVRFDPVQKSEISNLMSIYTHCSDLTLADLE--AKYEGQGYGAF 261

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFD--MSIHSQHMPTISISKDEVSRGMG 351
           KK +A  + +     ++  +    +   FD       +   T  ++ +EV   MG
Sbjct: 262 KKDLAEAVVSTFEPIQQRYREIRESGYIFDVLKKGAEKASETAELTLNEVKEKMG 316


>gi|194686589|ref|XP_001256627.2| PREDICTED: Tryptophanyl-tRNA synthetase, cytoplasmic-like [Bos
           taurus]
          Length = 461

 Score = 44.0 bits (103), Expect = 0.042,   Method: Composition-based stats.
 Identities = 39/248 (15%), Positives = 84/248 (33%), Gaps = 31/248 (12%)

Query: 15  RGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +  + LD   ++     Y G   ++ ++H GHL   +   WLQ   + P+ +
Sbjct: 124 RGIFFSHRDMHQILDAYENKKPFYLYTGRGPSSEAMHVGHLIPFIFTKWLQDVFNVPLVI 183

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                         D+ + + +   + +            I  G       + ++  ++ 
Sbjct: 184 -----------QMTDDEKYLWKDLTLDQAYGYAVENAKDIIACGFDINKTFIFSDLDYMG 232

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA-----YDFVELA 188
                   + +     + + ++F  V+       S    + ++  +QA       F ++ 
Sbjct: 233 --MSPGFYKNV---VKIQKHVTFNQVKGIFGFTDSDCIGKISFPAIQAAPSFSNSFPQIF 287

Query: 189 KNY---DCRLQMGGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTASGTKMGKTLS 242
           ++     C +     DQ        D+  R+  PK   L +   P L  A  TKM  +  
Sbjct: 288 RDRTDVQCLIPC-AIDQDPYFRMTRDVAPRIGYPKPALLHSTFFPALQGAQ-TKMSASDP 345

Query: 243 G-AIWLNK 249
             +I+L  
Sbjct: 346 NSSIFLTD 353


>gi|51598268|ref|YP_072456.1| tryptophanyl-tRNA synthetase [Borrelia garinii PBi]
 gi|51572839|gb|AAU06864.1| tryptophanyl-tRNA synthetase [Borrelia garinii PBi]
          Length = 345

 Score = 44.0 bits (103), Expect = 0.042,   Method: Composition-based stats.
 Identities = 31/230 (13%), Positives = 68/230 (29%), Gaps = 30/230 (13%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRD-ESRRMMRSQEIQEN 102
            T + LH GH    ++     +  ++   ++    ++   P  +   +      + + + 
Sbjct: 12  PTGA-LHLGHYVGSVVNRLKFQEEYETYFIIADLHTLTTKPDLKSINTIPFNVREMVLDY 70

Query: 103 IEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR 162
           +          I   +   +   L             ++  +     +  +         
Sbjct: 71  LACGINPNKVSIYLQSAIPELFELY--------LMFSMIVTVARLQRIPSIKDMSIAAG- 121

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT---- 218
             +E     L   Y +L + D +    N    L   G D   +I    +L  R       
Sbjct: 122 -LKEIPYGLL--GYPVLMSADILMAKAN----LVPVGRDNESHIEFARELARRFNHLYEN 174

Query: 219 ------PKLFALTSPLLTTASGTKMGKTLSGAIWL--NKEMTSPYNFWQY 260
                   +F  + PL+      KM K+L  AI+L  ++ +        Y
Sbjct: 175 NFFPIPESVFTDSRPLVGICGKNKMSKSLDNAIFLKDDENLLEKKIMSMY 224


>gi|84498023|ref|ZP_00996820.1| tryptophanyl-tRNA synthetase [Janibacter sp. HTCC2649]
 gi|84381523|gb|EAP97406.1| tryptophanyl-tRNA synthetase [Janibacter sp. HTCC2649]
          Length = 343

 Score = 44.0 bits (103), Expect = 0.042,   Method: Composition-based stats.
 Identities = 44/243 (18%), Positives = 76/243 (31%), Gaps = 34/243 (13%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           G   T+ SLH G+    ++  W++          +    ++   P+     R        
Sbjct: 19  GMQPTSDSLHLGNYLGALV-QWVKLQDEFDAYYFVADLHALT-VPTDPAVLR-------- 68

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
               E+ +   + FI  G     + +          +   ++  + +     RM      
Sbjct: 69  ----ERTRKTAAQFIAGGVDPERSAVFCQSHVTEHAELGWVMNCLTADGEARRMTQ---F 121

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
           + +  + Q+ +     Y +L A D +     YD      G DQ  ++    DL  R  T 
Sbjct: 122 KDKTAKGQNANVGLLTYPMLMAADILM----YDAAFVPVGEDQRQHLEITRDLAGRFNTR 177

Query: 220 KLFALTSPLLTTASGT-----------KMGKTLSGAIWLNKEMTSPYNFWQYWRN-IDDA 267
              AL  P      G            KM KT S    L   M  P    +  R+ + D 
Sbjct: 178 FGEALVVPEPYIVKGAAKIMDLQDPTSKMSKTGSSPKGLIDLMQEPAKIAKNIRSAVTDT 237

Query: 268 DVV 270
           D  
Sbjct: 238 DAE 240


>gi|332532314|ref|ZP_08408194.1| tryptophanyl-tRNA synthetase [Pseudoalteromonas haloplanktis
           ANT/505]
 gi|332038181|gb|EGI74627.1| tryptophanyl-tRNA synthetase [Pseudoalteromonas haloplanktis
           ANT/505]
          Length = 334

 Score = 44.0 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 40/217 (18%), Positives = 67/217 (30%), Gaps = 33/217 (15%)

Query: 140 LLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGG 199
           +L        +NRM  F+   S+     ++    F+Y +LQA D + L +     +   G
Sbjct: 94  VLNCYAQMGELNRMTQFKDKSSKHANNVNVGL--FSYPVLQAADIL-LYQADQVPV---G 147

Query: 200 SDQWGNIICGIDLGERLKT--PKLFALTSPLLTTASG---------TKMGKTL---SGAI 245
            DQ  ++    D+  R       +F L  P +               KM K+    +G I
Sbjct: 148 DDQKQHLELTRDIATRFNNLYGDVFKLPEPYIPEFGARVMSLQDPLKKMSKSDENPNGYI 207

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAK---------RLTTLPMSEIDRMAKL----QG 292
            L  E        +      D     +            LT L ++    +  L    + 
Sbjct: 208 MLLDEPKQIVKKLKKAVTDSDEQARIYFDRTEKPGVSNLLTLLSVATKRSIEDLVPEYED 267

Query: 293 KEINEAKKIIATEITTMVHGREEAEKAATAAMECFDM 329
           K     KK  A  +  M+   +   K         D 
Sbjct: 268 KMYGHLKKDTADAVVNMIEPIQARFKEIREDQNLLDG 304


>gi|331088278|ref|ZP_08337197.1| tryptophanyl-tRNA synthetase [Lachnospiraceae bacterium 3_1_46FAA]
 gi|330408522|gb|EGG87988.1| tryptophanyl-tRNA synthetase [Lachnospiraceae bacterium 3_1_46FAA]
          Length = 361

 Score = 44.0 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 47/268 (17%), Positives = 75/268 (27%), Gaps = 48/268 (17%)

Query: 44  LTASSLHAGHLTQLMLLFW---LQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
            T   LH GH      L     LQ TG    I +M      + D +   E  R    +  
Sbjct: 11  PTGR-LHVGHYVG--SLRRRVELQNTGEFDDIFIMIADAQALTDNADNPEKVRSNIIEVA 67

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
            + +                K+   + +    LC + +  +     S    N  +  E  
Sbjct: 68  LDYLACG---------LDPEKSTLFIQSQIPQLCELSFYYMNLVTVSRLQRNPTVKTEIK 118

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQ------------WGNII 207
               +    + F  F Y I QA D           + +G  DQ              N +
Sbjct: 119 MRNFETSIPVGF--FTYPISQAADITAFKA---TTVPVG-EDQMPMIEQTKEIVHKFNSV 172

Query: 208 CGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDA 267
            G  L +             L       KM K+L   I+L++E   P    +        
Sbjct: 173 YGDTLIDPKILLPENQACLRLPGIDGKAKMSKSLGNCIYLSEE---PEEIKKKV------ 223

Query: 268 DVVSFAKRLTTLPMSEIDRMAKLQGKEI 295
                    T      ++   KL+G  +
Sbjct: 224 -----FSMFTDPTHIRVEDPGKLEGNTV 246


>gi|302039244|ref|YP_003799566.1| putative pseudouridine synthase [Candidatus Nitrospira defluvii]
 gi|300607308|emb|CBK43641.1| putative Pseudouridine synthase [Candidatus Nitrospira defluvii]
          Length = 236

 Score = 44.0 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 13/60 (21%), Positives = 23/60 (38%), Gaps = 2/60 (3%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
           M +     + G   S  EA R +    + IN   ++    Q+  QD  +   + L  G +
Sbjct: 1   MRINKFFTEQGLC-SRREADRLIAEGRVTING-RVAKLGDQVSPQDAVARDGVVLQRGNR 58


>gi|225849728|ref|YP_002729962.1| hemolysin A [Persephonella marina EX-H1]
 gi|225646217|gb|ACO04403.1| hemolysin A [Persephonella marina EX-H1]
          Length = 272

 Score = 44.0 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 11/58 (18%), Positives = 25/58 (43%), Gaps = 2/58 (3%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD--FDSTGNIKLSFG 407
           +  L+V+ G   S  +A+R + +  + +N+  +     +I +    F       +S G
Sbjct: 7   IDKLLVERGLVESREKAQRLIMAGCVFVNDQRVDKPGTKIPVDANIFLKEKEKYVSRG 64


>gi|332252575|ref|XP_003275428.1| PREDICTED: tryptophanyl-tRNA synthetase, cytoplasmic-like isoform 1
           [Nomascus leucogenys]
 gi|332252579|ref|XP_003275430.1| PREDICTED: tryptophanyl-tRNA synthetase, cytoplasmic-like isoform 3
           [Nomascus leucogenys]
          Length = 430

 Score = 44.0 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 38/248 (15%), Positives = 81/248 (32%), Gaps = 31/248 (12%)

Query: 15  RGFIHQISN-PRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +  + LD   ++     Y G   ++ ++H GHL   +   WLQ   + P+ +
Sbjct: 93  RGIFFSHRDMNQVLDAYENKKPFYLYTGRGPSSEAMHVGHLIPFIFTKWLQDVFNVPLVI 152

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                         D+ + + +   + +            I  G       + ++  ++ 
Sbjct: 153 -----------QMTDDEKYLWKDLTLDQAYSYAVENAKDIIACGFDINKTFIFSDLDYMG 201

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA--------YDFV 185
                   + +     + + ++F  V+       S    + ++  +QA            
Sbjct: 202 --MSSGFYKNV---VKIQKHVTFNQVKGIFGFTDSDCIGKISFPAIQAAPSFSNSFPQIF 256

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTASGTKMGKTLS 242
           +   +  C +     DQ        D+  R+  PK   L +   P L  A  TKM  +  
Sbjct: 257 QDRTDIQCLIPC-AIDQDPYFRMTRDVAPRIGYPKPALLHSTFFPALQGAQ-TKMSASDP 314

Query: 243 G-AIWLNK 249
             +I+L  
Sbjct: 315 NSSIFLTD 322


>gi|294626723|ref|ZP_06705318.1| tryptophanyl-tRNA synthetase [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|294667173|ref|ZP_06732396.1| tryptophanyl-tRNA synthetase [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
 gi|292598971|gb|EFF43113.1| tryptophanyl-tRNA synthetase [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|292603072|gb|EFF46500.1| tryptophanyl-tRNA synthetase [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
          Length = 429

 Score = 44.0 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 21/96 (21%), Positives = 34/96 (35%), Gaps = 18/96 (18%)

Query: 164 KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFA 223
             +  ++   F Y +L A D +    +   R+ +G  DQ  +I    D  +R     ++ 
Sbjct: 124 DEDAGVTAGLFMYPVLMAADILIFNAH---RVPVG-RDQIQHIEMARDFAQRFN--HVYG 177

Query: 224 ---LTSP---------LLTTASGTKMGKTLSGAIWL 247
               T P          L    G KM K+    I L
Sbjct: 178 RDFFTLPEAVIDEQVSTLPGLDGRKMSKSYGNTIPL 213


>gi|293189751|ref|ZP_06608467.1| tryptophan--tRNA ligase [Actinomyces odontolyticus F0309]
 gi|292821341|gb|EFF80284.1| tryptophan--tRNA ligase [Actinomyces odontolyticus F0309]
          Length = 366

 Score = 44.0 bits (103), Expect = 0.044,   Method: Composition-based stats.
 Identities = 55/300 (18%), Positives = 88/300 (29%), Gaps = 45/300 (15%)

Query: 26  ELDILCSQGVVTAYI--GYDLTASSLHAGHLTQ-LMLLFWLQKTGHKPISLMGGGTSIIG 82
           E+D+   Q      I  G   T   LH GH    L     LQ  G +   L+     +I 
Sbjct: 26  EIDLAIDQDPSRFRILTGDRPTG-HLHLGHYFGTLRNRVLLQNRGVETWVLVADY-QVIT 83

Query: 83  DPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLR 142
           D       R  +           I    S+        +    LN          +  L 
Sbjct: 84  DRDGVGPIRERVLGLVADYLAAGIDPERSTIF----NHSAVPALN-------QLMLPFLS 132

Query: 143 EIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQ 202
            +              + +     ++++ L   Y + QA D +    N    +   G DQ
Sbjct: 133 LVTESELHRNPTVKAELEA--TEGRAMTGLMLTYPVHQAADILFCKAN----IVPVGQDQ 186

Query: 203 WGNIICGIDLGERLKT--------------PKLFALTSPLLTTASGTKMGKTLSGAIWLN 248
             ++     + +R                 P+      PLL    G KM K+    I L 
Sbjct: 187 LPHLEQARLIAQRFDKRYGRATPERPVFPRPEALLSEVPLLLGTDGQKMSKSRGNTIELR 246

Query: 249 KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLP--MSEIDRMAKLQGKEINEAKKIIATEI 306
                     +  +   DA+     +R+T  P    E+  +  L      EA + IA  I
Sbjct: 247 MTADETAKILKKAK--TDAE-----RRITFDPEGRPEVSNLLMLASLATGEAPEAIADRI 299


>gi|317501907|ref|ZP_07960091.1| tryptophanyl-tRNA synthetase II [Lachnospiraceae bacterium
           8_1_57FAA]
 gi|316896587|gb|EFV18674.1| tryptophanyl-tRNA synthetase II [Lachnospiraceae bacterium
           8_1_57FAA]
          Length = 364

 Score = 44.0 bits (103), Expect = 0.044,   Method: Composition-based stats.
 Identities = 47/268 (17%), Positives = 75/268 (27%), Gaps = 48/268 (17%)

Query: 44  LTASSLHAGHLTQLMLLFW---LQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
            T   LH GH      L     LQ TG    I +M      + D +   E  R    +  
Sbjct: 14  PTGR-LHVGHYVG--SLRRRVELQNTGEFDDIFIMIADAQALTDNADNPEKVRSNIIEVA 70

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
            + +                K+   + +    LC + +  +     S    N  +  E  
Sbjct: 71  LDYLACG---------LDPEKSTLFIQSQIPQLCELSFYYMNLVTVSRLQRNPTVKTEIK 121

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQ------------WGNII 207
               +    + F  F Y I QA D           + +G  DQ              N +
Sbjct: 122 MRNFETSIPVGF--FTYPISQAADITAFKA---TTVPVG-EDQMPMIEQTKEIVHKFNSV 175

Query: 208 CGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDA 267
            G  L +             L       KM K+L   I+L++E   P    +        
Sbjct: 176 YGDTLIDPKILLPENQACLRLPGIDGKAKMSKSLGNCIYLSEE---PEEIKKKV------ 226

Query: 268 DVVSFAKRLTTLPMSEIDRMAKLQGKEI 295
                    T      ++   KL+G  +
Sbjct: 227 -----FSMFTDPTHIRVEDPGKLEGNTV 249


>gi|328788128|ref|XP_394779.3| PREDICTED: tryptophanyl-tRNA synthetase, mitochondrial-like [Apis
           mellifera]
          Length = 391

 Score = 44.0 bits (103), Expect = 0.045,   Method: Composition-based stats.
 Identities = 34/225 (15%), Positives = 68/225 (30%), Gaps = 42/225 (18%)

Query: 35  VVTAYIGYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTS--IIGDPSFRDESR 91
               + G   T + LH G+    +      Q  G   I  +    +  +  DP       
Sbjct: 47  PKRIFSGIQPTGN-LHLGNYLGAIQKWIQFQDNGENVIWSIVDMHAITLSHDP------- 98

Query: 92  RMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVN 151
           + +     +     +             ++   M    +W        +L  + +   ++
Sbjct: 99  KELNDNIFKMTATLLACGIDPKKSILFQQSTVPMHTQLSW--------ILGCLSTQARLS 150

Query: 152 RMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGID 211
           R+      R + +  + +    + Y +LQA D + L K     +   G DQ  +I    +
Sbjct: 151 RLPQ---YREKSQTLKVIPLSLYIYPVLQAADIL-LYKATHVPV---GQDQVQHIQLAQE 203

Query: 212 LGERLKTPKLFALTSPL---LTTASG-----------TKMGKTLS 242
           L  +      F  T P+   L   +             KM K+  
Sbjct: 204 LAIKFNKK--FGDTFPVPHSLVNENASQRIKSLRDPLKKMSKSEK 246


>gi|255728597|ref|XP_002549224.1| tryptophanyl-tRNA synthetase [Candida tropicalis MYA-3404]
 gi|240133540|gb|EER33096.1| tryptophanyl-tRNA synthetase [Candida tropicalis MYA-3404]
          Length = 424

 Score = 44.0 bits (103), Expect = 0.045,   Method: Composition-based stats.
 Identities = 14/60 (23%), Positives = 24/60 (40%), Gaps = 1/60 (1%)

Query: 15  RGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +   +  L   G     Y G   ++ S+H GH+   +   WLQ+    P+ +
Sbjct: 73  RGVFFSQRDLDRILDLYEHGEPFFLYTGRGPSSDSMHLGHMVPFIFTKWLQEVFDAPLVI 132


>gi|153815709|ref|ZP_01968377.1| hypothetical protein RUMTOR_01947 [Ruminococcus torques ATCC 27756]
 gi|145846950|gb|EDK23868.1| hypothetical protein RUMTOR_01947 [Ruminococcus torques ATCC 27756]
          Length = 364

 Score = 44.0 bits (103), Expect = 0.045,   Method: Composition-based stats.
 Identities = 47/268 (17%), Positives = 75/268 (27%), Gaps = 48/268 (17%)

Query: 44  LTASSLHAGHLTQLMLLFW---LQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
            T   LH GH      L     LQ TG    I +M      + D +   E  R    +  
Sbjct: 14  PTGR-LHVGHYVG--SLRRRVELQNTGEFDDIFIMIADAQALTDNADNPEKVRSNIIEVA 70

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
            + +                K+   + +    LC + +  +     S    N  +  E  
Sbjct: 71  LDYLACG---------LDPEKSTLFIQSQIPQLCELSFYYMNLVTVSRLQRNPTVKTEIK 121

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQ------------WGNII 207
               +    + F  F Y I QA D           + +G  DQ              N +
Sbjct: 122 MRNFETSIPVGF--FTYPISQAADITAFKA---TTVPVG-EDQMPMIEQTKEIVHKFNSV 175

Query: 208 CGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDA 267
            G  L +             L       KM K+L   I+L++E   P    +        
Sbjct: 176 YGDTLIDPKILLPENQACLRLPGIDGKAKMSKSLGNCIYLSEE---PEEIKKKV------ 226

Query: 268 DVVSFAKRLTTLPMSEIDRMAKLQGKEI 295
                    T      ++   KL+G  +
Sbjct: 227 -----FSMFTDPTHIRVEDPGKLEGNTV 249


>gi|317401787|gb|EFV82402.1| TrpS protein [Achromobacter xylosoxidans C54]
          Length = 450

 Score = 44.0 bits (103), Expect = 0.045,   Method: Composition-based stats.
 Identities = 23/103 (22%), Positives = 41/103 (39%), Gaps = 18/103 (17%)

Query: 157 ESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL 216
           ++V   +  +  ++   F+Y +L A D V    N   ++ +G  DQ  ++    D+ +R 
Sbjct: 117 QNVAKGVDPDDGVTMGLFSYPVLMAADIVMFNAN---KVPVG-RDQIQHLEMARDIAQRF 172

Query: 217 KTPKLFA---LTSP---------LLTTASGTKMGKTLSGAIWL 247
               L+     T P          L    G KM K+ +  I L
Sbjct: 173 N--HLYGREYFTLPEVAIEEDVATLPGLDGRKMSKSYNNTIPL 213


>gi|300856972|ref|YP_003781956.1| tryptophanyl-tRNA synthetase [Clostridium ljungdahlii DSM 13528]
 gi|300437087|gb|ADK16854.1| tryptophanyl-tRNA synthetase [Clostridium ljungdahlii DSM 13528]
          Length = 336

 Score = 44.0 bits (103), Expect = 0.045,   Method: Composition-based stats.
 Identities = 48/293 (16%), Positives = 90/293 (30%), Gaps = 54/293 (18%)

Query: 31  CSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT--GHKPISLMGGGTSIIGDPSFRD 88
             +     + G   + + L  G+      L    K    +     +    +I      +D
Sbjct: 1   MEEKKKVIFSGIQPSGN-LTIGNYFG--ALKNWVKLQDKYDCYFCVVDLHAITVRQEPKD 57

Query: 89  ESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFF 148
             RR +    I           + FI     ++         WL  +     + E+    
Sbjct: 58  LRRRTLEVLAIYLAAGIDPEKNTIFI-----QSHVPTHCEAAWL--LNCFTYVGEL---- 106

Query: 149 SVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIIC 208
              RM  ++S   + +   S+S    NY +L A D +     Y+  L   G DQ  ++  
Sbjct: 107 --ERMTQYKSKSKKYENGGSISAGLLNYPVLMAADILI----YNADLVPVGKDQTQHVEL 160

Query: 209 GIDLGERLKTPKLFALTSP-LLTTASG----------TKMGKTLSG---AIWLNKEMTSP 254
             D+ ER         T P       G           KM K+       I +   M  P
Sbjct: 161 TRDIAERFNNLYSPTFTMPEAYIPEDGAKIMDLQDPTKKMSKSSDNPNSYILI---MDKP 217

Query: 255 YNFWQYW-RNIDDAD--------------VVSFAKRLTTLPMSEIDRMAKLQG 292
            +  +   R + D+               +++    +T +   EI++  + +G
Sbjct: 218 EDIKRKINRCVTDSIGKVKYNDDQPGVKNLINIMSAVTGMSHEEIEKKYEGKG 270


>gi|229110763|ref|ZP_04240326.1| hypothetical protein bcere0018_30130 [Bacillus cereus Rock1-15]
 gi|228672642|gb|EEL27923.1| hypothetical protein bcere0018_30130 [Bacillus cereus Rock1-15]
          Length = 323

 Score = 44.0 bits (103), Expect = 0.045,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 46/157 (29%), Gaps = 21/157 (13%)

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLF 222
           L+ +  ++   + Y IL A D + L +     +   G DQ  +I    D+          
Sbjct: 114 LEVDVGVNMGLYTYPILMAADIL-LFQATHVPV---GKDQIQHIEIARDIATYFNHTFCT 169

Query: 223 ALTSP---------LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWR------NIDDA 267
             T P         +L    G KM K+    I L  E           +      N    
Sbjct: 170 TFTLPEYVIQEEGAILPGLDGRKMSKSYGNVIPLFSEQEKLRKLIFKIKTDSSLPNEPKE 229

Query: 268 DVVSFAKRLTTLPMSEIDRMAKLQGKEIN--EAKKII 302
               F          EI  M +     I   + KK +
Sbjct: 230 LETLFMIYKEFATEDEIQSMREKYETGIRWGDVKKEL 266


>gi|255552884|ref|XP_002517485.1| tyrosyl-tRNA synthetase, putative [Ricinus communis]
 gi|223543496|gb|EEF45027.1| tyrosyl-tRNA synthetase, putative [Ricinus communis]
          Length = 413

 Score = 44.0 bits (103), Expect = 0.045,   Method: Composition-based stats.
 Identities = 38/233 (16%), Positives = 84/233 (36%), Gaps = 21/233 (9%)

Query: 15  RGFIHQISNPRELDILCSQGVVTA-YIGYDLTASSLHA--GHLTQLMLLFWLQKTGHKPI 71
           RG   +     EL  L ++      Y G++ +   +H   G + + + +  L   G K  
Sbjct: 41  RGIGEECIQEDELLNLLTKKPQPICYDGFEPSGR-MHIAQG-VMKTINVNKLTSAGCKVK 98

Query: 72  SLMGGGTSIIGDPSFRDESR-RMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
             +    + + +    D  + + +    ++        +    +++     +      E 
Sbjct: 99  IWIADWFAQLNNKMGGDLKKIQTVGRYFVEIWKAAGMDLDGGKVEFLWSSEEINSRAAEY 158

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
           W        L+ +I     + R+L    +  R ++++ L+  +  Y  +Q  D   L  +
Sbjct: 159 WP-------LVMDIARRNKLPRILRCVQIMGRSEQDE-LTAAQILYPCMQCADIFFLKAD 210

Query: 191 YDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLLTT-ASGT-KMGKT 240
             C+L   G DQ    +   +  + +K   K   L+  +L     G  KM K+
Sbjct: 211 I-CQL---GMDQRKVNVLAREYCDDIKRKNKPIILSHHMLPGLQEGQDKMSKS 259


>gi|167465434|ref|ZP_02330523.1| tryptophanyl-tRNA synthetase [Paenibacillus larvae subsp. larvae
           BRL-230010]
          Length = 316

 Score = 44.0 bits (103), Expect = 0.045,   Method: Composition-based stats.
 Identities = 39/235 (16%), Positives = 81/235 (34%), Gaps = 38/235 (16%)

Query: 149 SVNRMLSFES---VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGN 205
           ++  M   E     + +   ++++    F Y  L A D +     Y+  L   G DQ  +
Sbjct: 83  TITYMGELERMTQFKDKSAGKETVGAGLFTYPSLMAADILL----YNADLIPVGEDQKQH 138

Query: 206 IICGIDLGERLKT--PKLFALTSPLLTTASG---------TKMGKTLSGAIWLNKEMTSP 254
           +    DL  R      + F +  P +    G          KM K+          +  P
Sbjct: 139 LELTRDLAARFNNRFGETFRMPDPYIPEVGGRIMSLDDASKKMSKSNPNKNSFITMLDEP 198

Query: 255 YNFWQYW-RNIDD---------------ADVVSFAKRLTTLPMSEIDRMAKLQGKEINEA 298
               +   R + D               ++++S     + L +++++  AK +G+     
Sbjct: 199 SVIRKKISRAVTDSGREVRFDPVQKSEISNLMSIYTHCSDLTLADLE--AKYEGQGYGAF 256

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFD--MSIHSQHMPTISISKDEVSRGMG 351
           KK +A  + +     ++  +    +   FD       +   T  ++ +EV   MG
Sbjct: 257 KKDLAEAVVSTFEPIQQRYREIRESGYIFDVLKKGAEKASETAELTLNEVKEKMG 311


>gi|154337758|ref|XP_001565105.1| tryptophanyl-tRNA synthetase [Leishmania braziliensis
           MHOM/BR/75/M2904]
 gi|134062152|emb|CAM36540.1| putative tryptophanyl-tRNA synthetase [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 489

 Score = 44.0 bits (103), Expect = 0.045,   Method: Composition-based stats.
 Identities = 47/250 (18%), Positives = 78/250 (31%), Gaps = 35/250 (14%)

Query: 9   LSILSERGF------IHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFW 62
           L     RG       +H+  +  E  I   +  V  Y G   +A ++HAGH+   ML  +
Sbjct: 143 LHHFFSRGIAFSHRDLHKALDDIEASIKPDEPSVFLYTGRGPSAGTMHAGHVLPFMLAKY 202

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD 122
           LQ   + P+ +       I D                +E    I       I +G     
Sbjct: 203 LQDVFNLPLVI------QITDDEKFLFRGVPFEGAVAEEV---ILNNIKDIIAFGFHPRH 253

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ-A 181
             +  N  ++  +          +   + R ++  SV+  L    S +  +F +   Q A
Sbjct: 254 TFIFRNTHYMGELYP--------TVLPLQRSMTGNSVKHTLGITDSDNVGKFAFPATQAA 305

Query: 182 YDFVELAKN--------YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTAS 233
             F    +           C +     DQ    +       RLK P    L +  L    
Sbjct: 306 PCFSTAFRRVLPNGDRPMRCLIPC-AIDQDPFFVLTRAAAPRLKQPPPALLHTQFLPALK 364

Query: 234 G--TKMGKTL 241
           G   KM  + 
Sbjct: 365 GLEHKMSSSA 374


>gi|291542387|emb|CBL15497.1| tryptophanyl-tRNA synthetase [Ruminococcus bromii L2-63]
          Length = 353

 Score = 44.0 bits (103), Expect = 0.045,   Method: Composition-based stats.
 Identities = 37/236 (15%), Positives = 71/236 (30%), Gaps = 35/236 (14%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGH--KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +     LQ +G       ++    ++  +    ++ R+ +    + 
Sbjct: 11  PTGR-LHVGHYAGSLKERVKLQNSGEYDDIYLMIADAQALTDNAEHPEKVRQNILQVALD 69

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
                I             K+   + +    L  + +  +     S    N  +  E   
Sbjct: 70  YLACGI----------DPNKSTIFVQSMIPELTELTFYYMNLVTVSRVQRNPTVKAEIQM 119

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK--- 217
              +    + F  F Y I QA D     +     +   G DQ   +    ++  +     
Sbjct: 120 RNFEASIPVGF--FCYPISQAADITA-FRATAVPV---GEDQLPMLEQCKEIVHKFNSVY 173

Query: 218 ----TPKLFAL----TSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNI 264
               T     L        L    G  KM K+L   I+L +E   P +  +   ++
Sbjct: 174 GETLTEPQIILPSNKACLRLPGIDGKAKMSKSLGNCIYLAEE---PEDIKKKVMSM 226


>gi|186972755|pdb|2QUH|A Chain A, Crystal Structures Of Human Tryptophanyl-Trna Synthetase
           In Complex With Trp
 gi|186972757|pdb|2QUI|A Chain A, Crystal Structures Of Human Tryptophanyl-Trna Synthetase
           In Complex With Tryptophanamide And Atp
 gi|186972758|pdb|2QUI|B Chain B, Crystal Structures Of Human Tryptophanyl-Trna Synthetase
           In Complex With Tryptophanamide And Atp
 gi|186972759|pdb|2QUJ|A Chain A, Crystal Structures Of Human Tryptophanyl-Trna Synthetase
           In Complex With Trpamp
 gi|186972761|pdb|2QUK|A Chain A, Crystal Structures Of Human Tryptophanyl-Trna Synthetase
           In Complex With Atp(Putative)
 gi|253722573|pdb|2QUH|B Chain B, Crystal Structures Of Human Tryptophanyl-Trna Synthetase
           In Complex With Trp
          Length = 477

 Score = 44.0 bits (103), Expect = 0.045,   Method: Composition-based stats.
 Identities = 39/248 (15%), Positives = 84/248 (33%), Gaps = 31/248 (12%)

Query: 15  RGFIHQISN-PRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +  + LD   ++     Y G   ++ ++H GHL   +   WLQ   + P+ +
Sbjct: 134 RGIFFSHRDMNQVLDAYENKKPFYLYTGRGPSSEAMHVGHLIPFIFTKWLQDVFNVPLVI 193

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                         D+ + + +   + +            I  G       + ++  ++ 
Sbjct: 194 -----------QMTDDEKYLWKDLTLDQAYSYAVENAKDIIACGFDINKTFIFSDLDYMG 242

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA-----YDFVELA 188
                   + +     + + ++F  V+       S    + ++  +QA       F ++ 
Sbjct: 243 --MSSGFYKNV---VKIQKHVTFNQVKGIFGFTDSDCIGKISFPAIQAAPSFSNSFPQIF 297

Query: 189 K---NYDCRLQMGGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTASGTKMGKTLS 242
           +   +  C +     DQ        D+  R+  PK   L +   P L  A  TKM  +  
Sbjct: 298 RDRTDIQCLIPC-AIDQDPYFRMTRDVAPRIGYPKPALLHSTFFPALQGAQ-TKMSASDP 355

Query: 243 G-AIWLNK 249
             +I+L  
Sbjct: 356 NSSIFLTD 363


>gi|47419918|ref|NP_998810.1| tryptophanyl-tRNA synthetase, cytoplasmic isoform b [Homo sapiens]
 gi|47419920|ref|NP_998811.1| tryptophanyl-tRNA synthetase, cytoplasmic isoform b [Homo sapiens]
 gi|114654715|ref|XP_510164.2| PREDICTED: tryptophanyl-tRNA synthetase isoform 16 [Pan
           troglodytes]
 gi|114654717|ref|XP_001158622.1| PREDICTED: tryptophanyl-tRNA synthetase isoform 2 [Pan troglodytes]
 gi|114654719|ref|XP_001158683.1| PREDICTED: tryptophanyl-tRNA synthetase isoform 3 [Pan troglodytes]
 gi|114654721|ref|XP_001158743.1| PREDICTED: tryptophanyl-tRNA synthetase isoform 4 [Pan troglodytes]
 gi|114654725|ref|XP_001158887.1| PREDICTED: tryptophanyl-tRNA synthetase isoform 7 [Pan troglodytes]
 gi|114654727|ref|XP_001158929.1| PREDICTED: tryptophanyl-tRNA synthetase isoform 8 [Pan troglodytes]
 gi|114654729|ref|XP_001159069.1| PREDICTED: tryptophanyl-tRNA synthetase isoform 11 [Pan
           troglodytes]
 gi|114654731|ref|XP_001159119.1| PREDICTED: tryptophanyl-tRNA synthetase isoform 12 [Pan
           troglodytes]
 gi|114654733|ref|XP_001159169.1| PREDICTED: tryptophanyl-tRNA synthetase isoform 13 [Pan
           troglodytes]
 gi|114654735|ref|XP_001159219.1| PREDICTED: tryptophanyl-tRNA synthetase isoform 14 [Pan
           troglodytes]
 gi|158255718|dbj|BAF83830.1| unnamed protein product [Homo sapiens]
          Length = 430

 Score = 44.0 bits (103), Expect = 0.045,   Method: Composition-based stats.
 Identities = 39/248 (15%), Positives = 84/248 (33%), Gaps = 31/248 (12%)

Query: 15  RGFIHQISN-PRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +  + LD   ++     Y G   ++ ++H GHL   +   WLQ   + P+ +
Sbjct: 93  RGIFFSHRDMNQVLDAYENKKPFYLYTGRGPSSEAMHVGHLIPFIFTKWLQDVFNVPLVI 152

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                         D+ + + +   + +            I  G       + ++  ++ 
Sbjct: 153 -----------QMTDDEKYLWKDLTLDQAYSYAVENAKDIIACGFDINKTFIFSDLDYMG 201

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA-----YDFVELA 188
                   + +     + + ++F  V+       S    + ++  +QA       F ++ 
Sbjct: 202 --MSSGFYKNV---VKIQKHVTFNQVKGIFGFTDSDCIGKISFPAIQAAPSFSNSFPQIF 256

Query: 189 K---NYDCRLQMGGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTASGTKMGKTLS 242
           +   +  C +     DQ        D+  R+  PK   L +   P L  A  TKM  +  
Sbjct: 257 RDRTDIQCLIPC-AIDQDPYFRMTRDVAPRIGYPKPALLHSTFFPALQGAQ-TKMSASDP 314

Query: 243 G-AIWLNK 249
             +I+L  
Sbjct: 315 NSSIFLTD 322


>gi|47419914|ref|NP_004175.2| tryptophanyl-tRNA synthetase, cytoplasmic isoform a [Homo sapiens]
 gi|47419916|ref|NP_776049.1| tryptophanyl-tRNA synthetase, cytoplasmic isoform a [Homo sapiens]
 gi|114654707|ref|XP_001158980.1| PREDICTED: tryptophanyl-tRNA synthetase isoform 9 [Pan troglodytes]
 gi|114654709|ref|XP_001159023.1| PREDICTED: tryptophanyl-tRNA synthetase isoform 10 [Pan
           troglodytes]
 gi|332843138|ref|XP_001158843.2| PREDICTED: tryptophanyl-tRNA synthetase, cytoplasmic isoform 6 [Pan
           troglodytes]
 gi|135191|sp|P23381|SYWC_HUMAN RecName: Full=Tryptophanyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Interferon-induced protein 53; Short=IFP53;
           AltName: Full=Tryptophan--tRNA ligase; Short=TrpRS;
           Short=hWRS; Contains: RecName: Full=T1-TrpRS; Contains:
           RecName: Full=T2-TrpRS
 gi|30821|emb|CAA42545.1| 471 aa polypeptide (gamma2) [Homo sapiens]
 gi|184657|gb|AAA67324.1| transfer RNA-Trp synthetase [Homo sapiens]
 gi|17028363|gb|AAH17489.1| Tryptophanyl-tRNA synthetase [Homo sapiens]
 gi|28193186|emb|CAD62335.1| unnamed protein product [Homo sapiens]
 gi|55727244|emb|CAH90378.1| hypothetical protein [Pongo abelii]
 gi|119602106|gb|EAW81700.1| tryptophanyl-tRNA synthetase, isoform CRA_a [Homo sapiens]
 gi|119602107|gb|EAW81701.1| tryptophanyl-tRNA synthetase, isoform CRA_a [Homo sapiens]
 gi|119602108|gb|EAW81702.1| tryptophanyl-tRNA synthetase, isoform CRA_a [Homo sapiens]
 gi|119602109|gb|EAW81703.1| tryptophanyl-tRNA synthetase, isoform CRA_a [Homo sapiens]
 gi|193786343|dbj|BAG51626.1| unnamed protein product [Homo sapiens]
 gi|261861536|dbj|BAI47290.1| tryptophanyl-tRNA synthetase [synthetic construct]
          Length = 471

 Score = 44.0 bits (103), Expect = 0.045,   Method: Composition-based stats.
 Identities = 39/248 (15%), Positives = 84/248 (33%), Gaps = 31/248 (12%)

Query: 15  RGFIHQISN-PRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +  + LD   ++     Y G   ++ ++H GHL   +   WLQ   + P+ +
Sbjct: 134 RGIFFSHRDMNQVLDAYENKKPFYLYTGRGPSSEAMHVGHLIPFIFTKWLQDVFNVPLVI 193

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                         D+ + + +   + +            I  G       + ++  ++ 
Sbjct: 194 -----------QMTDDEKYLWKDLTLDQAYSYAVENAKDIIACGFDINKTFIFSDLDYMG 242

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA-----YDFVELA 188
                   + +     + + ++F  V+       S    + ++  +QA       F ++ 
Sbjct: 243 --MSSGFYKNV---VKIQKHVTFNQVKGIFGFTDSDCIGKISFPAIQAAPSFSNSFPQIF 297

Query: 189 K---NYDCRLQMGGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTASGTKMGKTLS 242
           +   +  C +     DQ        D+  R+  PK   L +   P L  A  TKM  +  
Sbjct: 298 RDRTDIQCLIPC-AIDQDPYFRMTRDVAPRIGYPKPALLHSTFFPALQGAQ-TKMSASDP 355

Query: 243 G-AIWLNK 249
             +I+L  
Sbjct: 356 NSSIFLTD 363


>gi|319900039|ref|YP_004159767.1| RNA-binding S4 domain protein [Bacteroides helcogenes P 36-108]
 gi|319415070|gb|ADV42181.1| RNA-binding S4 domain protein [Bacteroides helcogenes P 36-108]
          Length = 501

 Score = 44.0 bits (103), Expect = 0.046,   Method: Composition-based stats.
 Identities = 12/71 (16%), Positives = 31/71 (43%), Gaps = 1/71 (1%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           + +  + L   +  AG   S  EA   + +  + +N  +++    +IK  D     +  +
Sbjct: 261 DPNEPIRLNKFLANAGVC-SRREADEFITAGVVSVNGEVVTELGTKIKRGDEVKFHDQAV 319

Query: 405 SFGKKNHIICH 415
           S  +K +++ +
Sbjct: 320 SIERKIYVLLN 330


>gi|289705978|ref|ZP_06502352.1| tryptophan--tRNA ligase [Micrococcus luteus SK58]
 gi|289557315|gb|EFD50632.1| tryptophan--tRNA ligase [Micrococcus luteus SK58]
          Length = 360

 Score = 44.0 bits (103), Expect = 0.046,   Method: Composition-based stats.
 Identities = 44/299 (14%), Positives = 95/299 (31%), Gaps = 51/299 (17%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSII--GDPSFRDESRRMMRSQE 98
           G   +A SLH G+    ++ +   +   +    +    +I    DP+   E  R+  +Q 
Sbjct: 34  GMQPSADSLHLGNYLGALVNWERTQADFEAFFFIPDLHAITVPQDPAALAERTRVAAAQF 93

Query: 99  IQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
           I   I+  +       +       A +            +  +  +G    + +    + 
Sbjct: 94  IAGGIDPERSTLFVQSQVPEHAQLAWV------------LTCMTGMGEAMRMTQF--KDK 139

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
              +      +  L   Y +L A D + L + +   +   G DQ  ++    DL +R   
Sbjct: 140 SAKQGADAAGVGLL--AYPMLMAADIL-LYQPHGVPV---GDDQRQHVELTRDLAQRFNH 193

Query: 219 PKLFALTSPLLTT---ASGT----------KMGKTLSGAIWLNKEMTSPYNFWQYWRNID 265
              +  T  + T     +G           KM K+ +    L   +  P    +  ++  
Sbjct: 194 R--YGETFVVPTGFYPETGARIYDLQDPTSKMSKSAASPNGLINILEEPKKTAKKIKSAV 251

Query: 266 DAD-------------VVSFAKRLTTLPMSEIDRMAKL-QGKEINEAKKIIATEITTMV 310
             D             V +    L+ +  + I ++ +   GK     K  +A  +   +
Sbjct: 252 TDDGTEVRFDREAKPGVSNLLTILSAVSGTPIPQLEEEFVGKMYGHLKVAVADAVVERL 310


>gi|126662795|ref|ZP_01733794.1| tryptophan--tRNA ligase [Flavobacteria bacterium BAL38]
 gi|126626174|gb|EAZ96863.1| tryptophan--tRNA ligase [Flavobacteria bacterium BAL38]
          Length = 322

 Score = 44.0 bits (103), Expect = 0.046,   Method: Composition-based stats.
 Identities = 33/224 (14%), Positives = 67/224 (29%), Gaps = 39/224 (17%)

Query: 50  HAGHLT-QLMLLFWLQKT-GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIK 107
           H G+L   ++    + +   ++    +    SI    +   +  R          +    
Sbjct: 15  HLGNLLGAILPAIQMAENPDNQSFLFIADLHSITQIKNG--DELRQNTYSTAATWLACGL 72

Query: 108 GIFSS-FIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE 166
                 F +       A +    +W            +  FF   R+    S + +  R 
Sbjct: 73  NTDKVIFYRQSDVPQTAEL----SWY-----------LSCFFPFQRLTLAHSFKDKADRL 117

Query: 167 QSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTS 226
           + ++   F Y +L A D +     YD  +   G DQ  ++    D+  R         T 
Sbjct: 118 EDVNAGLFTYPMLMAADILL----YDANIVPVGKDQMQHLEITRDVASRFN--HQMGETF 171

Query: 227 PL-----------LTTASGTKMGKTLSG--AIWLNKEMTSPYNF 257
            L           +    G KM K+ +    I+++ +       
Sbjct: 172 VLPEGKTSEETMYVPGTDGQKMSKSRNNFINIFVDDKALRKQIM 215


>gi|119190081|ref|XP_001245647.1| hypothetical protein CIMG_05088 [Coccidioides immitis RS]
          Length = 490

 Score = 44.0 bits (103), Expect = 0.046,   Method: Composition-based stats.
 Identities = 15/61 (24%), Positives = 23/61 (37%), Gaps = 1/61 (1%)

Query: 15  RGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +  + LD   +      Y G   ++ +LH GH        WLQ     P+ +
Sbjct: 126 RGLFFSHRDFDKILDKYEAGEPFFMYTGRGPSSDALHLGHTIPFSFTKWLQDVFDVPLVI 185

Query: 74  M 74
           M
Sbjct: 186 M 186


>gi|227551334|ref|ZP_03981383.1| tryptophan--tRNA ligase [Enterococcus faecium TX1330]
 gi|227179545|gb|EEI60517.1| tryptophan--tRNA ligase [Enterococcus faecium TX1330]
          Length = 348

 Score = 44.0 bits (103), Expect = 0.046,   Method: Composition-based stats.
 Identities = 54/342 (15%), Positives = 100/342 (29%), Gaps = 53/342 (15%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
            T   LH GH    +      +        +     +I D      +      +++  N+
Sbjct: 23  PTGK-LHLGHYVGSLKTRVAMQADEDNQLFV-----MIADMQ--ALTDNAKNPEKVSSNV 74

Query: 104 EKIKGIFSSFIKY-----GTGKTDALMLNNETWLCSIKYIDL-LREIGSFFSVNRMLSFE 157
                     + Y        K+   + +    L  +    L L  +G     N  +  E
Sbjct: 75  ------LQVALDYLAVGLDPAKSTLFIQSQIPELAELTMYYLNLVSVGR-VRRNPTVKTE 127

Query: 158 SVRSRLKREQSLSFLEFNYMILQAYDFVELAKN--------YDCRLQMGGSDQWGNIICG 209
             + +        F  F Y + QA D      N             Q     Q  N   G
Sbjct: 128 IEQKKFGESVPTGF--FIYPVSQAADITAFKANLVPVGEDQKPMLEQTQEIVQSFNHTYG 185

Query: 210 IDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKE----MTSPYNFW------ 258
             L E         +    L    G  KM K+L   I+++           + +      
Sbjct: 186 EVLVEPKGVFPPKGMGR--LPGIDGNGKMSKSLGNGIYISDPADVLKKKVMSMYTDPNHI 243

Query: 259 --QYWRNIDDADVVSFAKRL-TTLP-MSEIDRMAKLQGKEINEAKKIIAT----EITTMV 310
             Q    ++   V ++     T    + E+    +  G    + K+ +      E   + 
Sbjct: 244 HVQDPGQVEGNMVFTYLDVFGTDKEAIEEMKAHYRRGGLGDVKIKRYLIDVLEAEFAPIR 303

Query: 311 HGREEAEKAATAAME-CFDMSIHSQHMPTISISKDEVSRGMG 351
             REE EK  +A ME     S  +  +   ++S+ + + G+ 
Sbjct: 304 ARREELEKDPSAVMEILRKGSEEAAKVAAQTLSEVKSAMGIN 345


>gi|219684830|ref|ZP_03539772.1| tryptophanyl-tRNA synthetase [Borrelia garinii PBr]
 gi|219671775|gb|EED28830.1| tryptophanyl-tRNA synthetase [Borrelia garinii PBr]
          Length = 350

 Score = 44.0 bits (103), Expect = 0.046,   Method: Composition-based stats.
 Identities = 31/230 (13%), Positives = 69/230 (30%), Gaps = 30/230 (13%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRD-ESRRMMRSQEIQEN 102
            T + LH GH    ++     +  ++   ++    ++   P  +  ++      + + + 
Sbjct: 12  PTGA-LHLGHYVGSVVNRLKFQEKYETYFIIADLHTLTTKPDLKSIDTIPFNVREMVLDY 70

Query: 103 IEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR 162
           +          I   +   +   L             ++  +     +  +         
Sbjct: 71  LACGINPNKVSIYLQSAIPELFELY--------LIFSMIVTVARLQRIPSIKDMSIAAG- 121

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT---- 218
             +E     L   Y +L + D +    N    L   G D   +I    +L  R       
Sbjct: 122 -LKEIPYGLL--GYPVLMSADILMAKAN----LVPVGRDNESHIEFARELARRFNHLYEN 174

Query: 219 ------PKLFALTSPLLTTASGTKMGKTLSGAIWL--NKEMTSPYNFWQY 260
                   +F  + PL+      KM K+L  AI+L  ++ +        Y
Sbjct: 175 NFFPIPESVFTDSRPLVGICGKNKMSKSLDNAIFLKDDENLLEKKIMSMY 224


>gi|184201442|ref|YP_001855649.1| tryptophanyl-tRNA synthetase [Kocuria rhizophila DC2201]
 gi|183581672|dbj|BAG30143.1| tryptophanyl-tRNA synthetase [Kocuria rhizophila DC2201]
          Length = 342

 Score = 44.0 bits (103), Expect = 0.046,   Method: Composition-based stats.
 Identities = 42/296 (14%), Positives = 89/296 (30%), Gaps = 51/296 (17%)

Query: 41  GYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQE- 98
           G   +A SLH G+    L     +Q        +    +   G        R  + + + 
Sbjct: 17  GVQPSADSLHLGNYVGALRNWVDMQDENDCVFFVADLHSITTGQDPATMSERTRVTAAQY 76

Query: 99  IQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
           I   I+  +       +       A +LN             +   G    + +    + 
Sbjct: 77  IAAGIDPERSTLLIQSQVPEHTQLAWVLN------------CITGYGEAARMTQF--KDK 122

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
              +     ++    F Y +L A D + + +     +   G DQ  ++     L +R  +
Sbjct: 123 SVKQGAENTTVGL--FTYPVLMAADIL-VYQANQVPV---GEDQRQHLELTRTLAQRFNS 176

Query: 219 PKLFALTS-----PLLTTASG--------TKMGKTLSGAIWLNKEMTSPYNFWQYWRNID 265
              F  T       +L  ++          KM K+      L + +       +  R+  
Sbjct: 177 R--FGATFEVPDAKILENSAKIYDLQNPTAKMSKSAPSDAGLVRLLDPAKVNAKKIRSAV 234

Query: 266 DAD-------------VVSFAKRLTTLPMSEIDR-MAKLQGKEINEAKKIIATEIT 307
             D             V +     ++L  + ++  + + +GK     K  +A  +T
Sbjct: 235 TDDGTEVRFDRQAKPGVSNLLTIYSSLSGAPVETLVEQYEGKMYGHLKVDLAEVVT 290


>gi|16124485|ref|NP_419049.1| S4 domain-containing protein [Caulobacter crescentus CB15]
 gi|221233169|ref|YP_002515605.1| ribosomal large subunit pseudouridine synthase B [Caulobacter
           crescentus NA1000]
 gi|13421359|gb|AAK22217.1| S4 domain protein [Caulobacter crescentus CB15]
 gi|220962341|gb|ACL93697.1| ribosomal large subunit pseudouridine synthase B [Caulobacter
           crescentus NA1000]
          Length = 421

 Score = 44.0 bits (103), Expect = 0.046,   Method: Composition-based stats.
 Identities = 10/50 (20%), Positives = 23/50 (46%), Gaps = 1/50 (2%)

Query: 348 RGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
            G  +   + +AG   S  E  R +++  + IN  +++   +++   DF 
Sbjct: 33  PGERVAKALARAG-VASRREVERLIEAGRVAINGKVLTTPAVKVAPGDFL 81


>gi|238650937|ref|YP_002916793.1| lysyl-tRNA synthetase [Rickettsia peacockii str. Rustic]
 gi|259511533|sp|C4K2E4|SYK_RICPU RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|238625035|gb|ACR47741.1| lysyl-tRNA synthetase [Rickettsia peacockii str. Rustic]
          Length = 522

 Score = 44.0 bits (103), Expect = 0.046,   Method: Composition-based stats.
 Identities = 22/135 (16%), Positives = 41/135 (30%), Gaps = 8/135 (5%)

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            DF           +M G D   N     ++   L       L   L    +G K+ K+ 
Sbjct: 236 PDFGMRWAALKVDYEMYGKDHLANARLYSEICRILGGKPPVQLCYELFLDENGEKISKSK 295

Query: 242 SGAIWLNK-EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINE 297
             +I ++     +P      +      +     +    +    +D       K   E + 
Sbjct: 296 GNSISIDDWLKYAPVESMALFMY---QNPTRAKRLFFDVIPKNVDEYITFNQKYHLEEDR 352

Query: 298 AKKIIATEITTMVHG 312
           AK+  A  +  + HG
Sbjct: 353 AKR-FANPVYHIHHG 366


>gi|311114041|ref|YP_003985262.1| tryptophan--tRNA ligase [Gardnerella vaginalis ATCC 14019]
 gi|310945535|gb|ADP38239.1| tryptophan--tRNA ligase [Gardnerella vaginalis ATCC 14019]
          Length = 388

 Score = 44.0 bits (103), Expect = 0.046,   Method: Composition-based stats.
 Identities = 34/255 (13%), Positives = 70/255 (27%), Gaps = 40/255 (15%)

Query: 22  SNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSI 80
           S+     +  +    T   G   T   LH GH    +     +Q  G     ++      
Sbjct: 50  SDATLEKLKANPSSFTMLTGDRPTGR-LHLGHYFGSIRERVAMQNLGVNTNVIIADY--- 105

Query: 81  IGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY----GTGKTDALMLNNETWLCSIK 136
                      +++  ++  E++E    + +  + Y       K   +  ++     +  
Sbjct: 106 -----------QVITDRDTVEHVE--DNVLNLVLDYMAAGIDPKKTMIFTHSAVPAENQL 152

Query: 137 YIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQ 196
            +  L  +              +        +L+ L   Y + QA D   L    +    
Sbjct: 153 MLPFLSLVTEAELHRNPTVKAEME---ASGHALTGLLLTYPVHQACD--ILFCKANVV-- 205

Query: 197 MGGSDQWGNIICGIDLGERLKT----------PKLFALT-SPLLTTASGTKMGKTLSGAI 245
             G D   +I     +  R                  L+ +P +    G KM K+   +I
Sbjct: 206 PIGKDNLPHIEITRTIARRFNERYAKKNPVFPEPAAILSDTPEIPGLDGRKMSKSYGNSI 265

Query: 246 WLNKEMTSPYNFWQY 260
            L           + 
Sbjct: 266 MLGATAEETAKLIKK 280


>gi|320032994|gb|EFW14944.1| tryptophanyl-tRNA synthetase [Coccidioides posadasii str. Silveira]
          Length = 490

 Score = 44.0 bits (103), Expect = 0.047,   Method: Composition-based stats.
 Identities = 15/61 (24%), Positives = 23/61 (37%), Gaps = 1/61 (1%)

Query: 15  RGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +  + LD   +      Y G   ++ +LH GH        WLQ     P+ +
Sbjct: 126 RGLFFSHRDFDKILDKYEAGEPFFMYTGRGPSSDALHLGHTIPFSFTKWLQDVFDVPLVI 185

Query: 74  M 74
           M
Sbjct: 186 M 186


>gi|218294781|ref|ZP_03495635.1| RNA-binding S4 domain protein [Thermus aquaticus Y51MC23]
 gi|218244689|gb|EED11213.1| RNA-binding S4 domain protein [Thermus aquaticus Y51MC23]
          Length = 209

 Score = 44.0 bits (103), Expect = 0.047,   Method: Composition-based stats.
 Identities = 17/104 (16%), Positives = 40/104 (38%), Gaps = 14/104 (13%)

Query: 295 INEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLT 354
           + E +K+        ++G  E +         F+ +   + +    +     SR   ++ 
Sbjct: 58  LREKQKL------RRIYGISETQ-----FRNLFEEASRKKGVTGTVLLGLLESRLDNVVY 106

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
              + GFA S  +AR+ ++   I +N   +     ++K  D  +
Sbjct: 107 ---RLGFAQSRRQARQMVRHGHITVNGRRVDLPAYRVKPGDEIA 147


>gi|32709|emb|CAA44450.1| IFP53 [Homo sapiens]
          Length = 471

 Score = 44.0 bits (103), Expect = 0.047,   Method: Composition-based stats.
 Identities = 39/248 (15%), Positives = 84/248 (33%), Gaps = 31/248 (12%)

Query: 15  RGFIHQISN-PRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +  + LD   ++     Y G   ++ ++H GHL   +   WLQ   + P+ +
Sbjct: 134 RGIFFSHRDMNQVLDAYENKKPFYLYTGRGPSSEAMHVGHLIPFIFTKWLQDVFNVPLVI 193

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                         D+ + + +   + +            I  G       + ++  ++ 
Sbjct: 194 -----------QMTDDEKYLWKDLTLDQAYSYAVENAKDIIACGFDINKTFIFSDLDYMG 242

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA-----YDFVELA 188
                   + +     + + ++F  V+       S    + ++  +QA       F ++ 
Sbjct: 243 --MSSGFYKNV---VKIQKHVTFNQVKGIFGFTDSDCIGKISFPAIQAAPSFSNSFPQIF 297

Query: 189 K---NYDCRLQMGGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTASGTKMGKTLS 242
           +   +  C +     DQ        D+  R+  PK   L +   P L  A  TKM  +  
Sbjct: 298 RDRTDIQCLIPC-AIDQDPYFRMTRDVAPRIGYPKPALLHSTFFPALQGAQ-TKMSASDP 355

Query: 243 G-AIWLNK 249
             +I+L  
Sbjct: 356 NSSIFLTD 363


>gi|291460666|ref|ZP_06600056.1| ribosomal large subunit pseudouridine synthase F [Oribacterium sp.
           oral taxon 078 str. F0262]
 gi|291416625|gb|EFE90344.1| ribosomal large subunit pseudouridine synthase F [Oribacterium sp.
           oral taxon 078 str. F0262]
          Length = 247

 Score = 44.0 bits (103), Expect = 0.047,   Method: Composition-based stats.
 Identities = 9/53 (16%), Positives = 19/53 (35%), Gaps = 1/53 (1%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGK 408
           + + G   S  EA R +    +++N       +   +    +  G +    GK
Sbjct: 7   LSELGLC-SRREADRWIAEGRVRLNGETAEMGQQVEEKDRLELDGKLVKKAGK 58


>gi|294806727|ref|ZP_06765554.1| pseudouridylate synthase [Bacteroides xylanisolvens SD CC 1b]
 gi|294446009|gb|EFG14649.1| pseudouridylate synthase [Bacteroides xylanisolvens SD CC 1b]
          Length = 319

 Score = 44.0 bits (103), Expect = 0.048,   Method: Composition-based stats.
 Identities = 12/71 (16%), Positives = 31/71 (43%), Gaps = 1/71 (1%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           + +  + L   +  AG   S  EA   + +  + +N  +++    +IK  D     +  +
Sbjct: 79  DPNEPIRLNKFLANAGVC-SRREADEFITAGVVSVNGEVVTELGTKIKRSDVVKFHDEPV 137

Query: 405 SFGKKNHIICH 415
           S  +K +++ +
Sbjct: 138 SIERKVYVLLN 148


>gi|294645459|ref|ZP_06723160.1| pseudouridylate synthase [Bacteroides ovatus SD CC 2a]
 gi|292639160|gb|EFF57477.1| pseudouridylate synthase [Bacteroides ovatus SD CC 2a]
          Length = 320

 Score = 44.0 bits (103), Expect = 0.048,   Method: Composition-based stats.
 Identities = 12/71 (16%), Positives = 31/71 (43%), Gaps = 1/71 (1%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           + +  + L   +  AG   S  EA   + +  + +N  +++    +IK  D     +  +
Sbjct: 80  DPNEPIRLNKFLANAGVC-SRREADEFITAGVVSVNGEVVTELGTKIKRSDVVKFHDEPV 138

Query: 405 SFGKKNHIICH 415
           S  +K +++ +
Sbjct: 139 SIERKVYVLLN 149


>gi|329768986|ref|ZP_08260409.1| tryptophanyl-tRNA synthetase [Gemella sanguinis M325]
 gi|328835793|gb|EGF85516.1| tryptophanyl-tRNA synthetase [Gemella sanguinis M325]
          Length = 338

 Score = 44.0 bits (103), Expect = 0.048,   Method: Composition-based stats.
 Identities = 45/341 (13%), Positives = 92/341 (26%), Gaps = 50/341 (14%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
            T   LH GH    +      +        +     +I D     +      +    + I
Sbjct: 11  PTGK-LHLGHYVGSLKNRVALQNEEDTEIFV-----MIADQQALTD-----NADNPGKVI 59

Query: 104 EKIKGIFSSFIK--YGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
           E I  +   ++       +T   + +    L  +    L     S    N  +  E    
Sbjct: 60  ENITEVALDYLAVGLDPSRTTIFIQSQIPQLAELNMYYLNLVTVSRLHRNPTVKQEINDK 119

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK---T 218
           +        F  F Y + QA D       +   + +G  DQ   +    ++         
Sbjct: 120 KFGESIPAGF--FTYPVSQAADITAFKATH---VPVG-EDQKPMLEQTREIVRDFNRIYN 173

Query: 219 PKLFALTSPLLT--------TASGT-KMGKTLSGAIWLNKEMTSPYNFWQYW------RN 263
             +  L   +L            G  KM K+L+  I+L        +             
Sbjct: 174 KDVLVLPEIILPPKDHARLVGIDGKGKMSKSLNNGIYLGDSEKDIKDKVMKMYTDPNHIR 233

Query: 264 IDD------ADVVSFAKRLTTLPMS--EIDRMAKLQGKEINEAKKIIATEITTMV----- 310
           ++D        V  +            E+       G    + KK +   +   +     
Sbjct: 234 VEDPGQVEGNVVFKYLDIFDPRTDEVAELKEHYSRGGLGDVKLKKRLNEVMQEFLRPIRE 293

Query: 311 HGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMG 351
              E A+  A         S  ++ +   ++ + + + G+ 
Sbjct: 294 RREEFAKDKAEVYNMLKAGSEKAESVAASTLDEVKDAMGIN 334


>gi|332799319|ref|YP_004460818.1| tryptophanyl-tRNA synthetase [Tepidanaerobacter sp. Re1]
 gi|332697054|gb|AEE91511.1| tryptophanyl-tRNA synthetase [Tepidanaerobacter sp. Re1]
          Length = 327

 Score = 44.0 bits (103), Expect = 0.049,   Method: Composition-based stats.
 Identities = 43/300 (14%), Positives = 80/300 (26%), Gaps = 70/300 (23%)

Query: 41  GYDLTASSLHAGHLTQLM----LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRM--- 93
           G   T   LH G++   +     L          +      T        ++  R+M   
Sbjct: 9   GMRPTGR-LHMGNMMGALTNWVKLQDDYDCFFVVVDWHALTTGYQNTEDLKENIRQMVID 67

Query: 94  -----MRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCS-IKYIDLLREIGSF 147
                +  ++    ++      +      +      M+   +WL     Y + L+++ S 
Sbjct: 68  WISVGLDPKKCNIFVQSHVKQHAELHLLLS------MITPLSWLERCPTYKEQLKQLESR 121

Query: 148 FSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNII 207
                                       Y +L A D + + K     +   G DQ  +I 
Sbjct: 122 EINTYGF-------------------LGYPVLMATDIL-IYKANKVPV---GKDQEAHIE 158

Query: 208 CGIDLGERLK--------TPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQ 259
              ++  R           P+       +L    G KM K+    I   +    P    Q
Sbjct: 159 LSREISRRFNYIYKPVFPEPEALYTEFKVLPGIDGRKMSKSYDNYI---EISAGPEVIKQ 215

Query: 260 YW-RNIDD-----------ADVVSFAKRLTTLP----MSEIDRMAKLQGKEINEAKKIIA 303
                I D            D+ +     T       + E+    +       E KK +A
Sbjct: 216 KVKMMITDPARIRKNDPGHPDICNVYAFYTAFDEQNNIQELKEACEKGQIGCVECKKKLA 275


>gi|304404734|ref|ZP_07386395.1| tryptophanyl-tRNA synthetase [Paenibacillus curdlanolyticus YK9]
 gi|304346541|gb|EFM12374.1| tryptophanyl-tRNA synthetase [Paenibacillus curdlanolyticus YK9]
          Length = 313

 Score = 44.0 bits (103), Expect = 0.049,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 52/157 (33%), Gaps = 24/157 (15%)

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT---- 218
           L +  +L  +   Y +L A D + L       L   G D    +    +L ++       
Sbjct: 109 LSQNPTLDMVSCVYPVLMASDTLML----GADLVFAGRDHTHGLEFVRNLAKKFNACYGD 164

Query: 219 -----PKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNI-DDADVVSF 272
                  +F   + ++    G KM K+    I +   + SP    +    +    D  S+
Sbjct: 165 ILVAPEPIFPNLTNMVQGLDGRKMSKSFDNTISI---LDSPDVLNEKIMRLNSGDDEASY 221

Query: 273 AKRLTTLP-------MSEIDRMAKLQGKEINEAKKII 302
              L  L        + EI    + +   ++E K  +
Sbjct: 222 ETILELLSYSVSVEQLEEIKARIQTKNIALSEMKSAL 258


>gi|229075331|ref|ZP_04208324.1| Tryptophanyl-tRNA synthetase [Bacillus cereus Rock4-18]
 gi|228707882|gb|EEL60062.1| Tryptophanyl-tRNA synthetase [Bacillus cereus Rock4-18]
          Length = 327

 Score = 44.0 bits (103), Expect = 0.049,   Method: Composition-based stats.
 Identities = 31/161 (19%), Positives = 50/161 (31%), Gaps = 29/161 (18%)

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLF 222
           L+ +  ++   + Y IL A D + L +     +   G DQ  +I    D+         F
Sbjct: 118 LEIDAGVNMGLYTYPILMAADIL-LFQATHVPV---GKDQIQHIEIARDIATYFN--HTF 171

Query: 223 ALTSPL-----------LTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVS 271
            +T  L           L    G KM K+    I L  E           +   D+ + +
Sbjct: 172 GITFTLPEYVVQEEGAILPGLDGRKMSKSYGNVIPLFAEREKLRKLILKIK--TDSSLPN 229

Query: 272 ----FAKRLT----TLPMSEIDRMAKLQGKEI--NEAKKII 302
                    T         EI  M +     I   + KK +
Sbjct: 230 EPKELETLFTIYKEFATKDEIQSMREKYETGIGWGDVKKEL 270


>gi|15594351|ref|NP_212139.1| tryptophanyl-tRNA synthetase [Borrelia burgdorferi B31]
 gi|3915079|sp|O51038|SYW_BORBU RecName: Full=Tryptophanyl-tRNA synthetase; AltName:
           Full=Tryptophan--tRNA ligase; Short=TrpRS
 gi|2687887|gb|AAC66398.1| tryptophanyl-tRNA synthetase (trsA) [Borrelia burgdorferi B31]
          Length = 353

 Score = 44.0 bits (103), Expect = 0.049,   Method: Composition-based stats.
 Identities = 31/218 (14%), Positives = 67/218 (30%), Gaps = 28/218 (12%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRD-ESRRMMRSQEIQEN 102
            T + LH GH    ++     +  ++   ++    ++   P  +   +      + + + 
Sbjct: 14  PTGA-LHLGHYVGSVVNRLKFQEEYETYFIIADLHTLTTKPDLKSINTIPSNVREMVLDY 72

Query: 103 IEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR 162
           +          I   +   +   L+            ++  +     +  +         
Sbjct: 73  LACGINPDKVSIYLQSAIPELFELH--------LIFSMIVTVARLQRIPSIKDMSIAAG- 123

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT---- 218
             +E     L   Y +L + D +    N    L   G D   +I    +L  R       
Sbjct: 124 -LKEIPYGLL--GYPVLMSADILMTKAN----LVPVGRDNESHIEFARELARRFNHLYKN 176

Query: 219 ------PKLFALTSPLLTTASGTKMGKTLSGAIWLNKE 250
                   +F  + PL+      KM K+L  AI+LN +
Sbjct: 177 NFFPIPESVFTDSRPLVGIYGKNKMSKSLDNAIFLNDD 214


>gi|303233312|ref|ZP_07319983.1| tryptophan--tRNA ligase [Atopobium vaginae PB189-T1-4]
 gi|302480612|gb|EFL43701.1| tryptophan--tRNA ligase [Atopobium vaginae PB189-T1-4]
          Length = 349

 Score = 44.0 bits (103), Expect = 0.049,   Method: Composition-based stats.
 Identities = 36/219 (16%), Positives = 66/219 (30%), Gaps = 41/219 (18%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN 102
            T   LH GH    +     LQ  G     ++                 +++  ++  E+
Sbjct: 36  PTGR-LHLGHYFGTLKERVRLQNLGMPTNIIIADY--------------QVITDRDTTEH 80

Query: 103 IEKIKGIFSSFIKYG----TGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
           I+    +++  I Y       +   +  ++     +   +  L  +     +        
Sbjct: 81  IQ--DNVYNMVIDYLACGINPEKTMIFTHSAVPALNQLMLPFLSLLTEAELLRNPTVK-- 136

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
              +     +L+ L   Y + QA D   L    +      G DQ  +I     +  R   
Sbjct: 137 -AEQEASGHALTGLLLTYPVHQACD--ILFCKGNVV--PVGRDQLPHIETTNKIAHRFNA 191

Query: 219 PKLFALTSP----LLT------TASGTKMGKTLSGAIWL 247
              +    P    LLT         G KM K+   AI L
Sbjct: 192 R--YGTVFPEVTGLLTASTMLPGLDGRKMSKSYGNAISL 228


>gi|169632629|ref|YP_001706365.1| tryptophanyl-tRNA synthetase II [Acinetobacter baumannii SDF]
 gi|169151421|emb|CAP00154.1| tryptophanyl-tRNA synthetase [Acinetobacter baumannii]
          Length = 337

 Score = 44.0 bits (103), Expect = 0.049,   Method: Composition-based stats.
 Identities = 64/340 (18%), Positives = 103/340 (30%), Gaps = 48/340 (14%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
            T   LH GH    +      +  H    L+    ++  +    D+ RR      I E  
Sbjct: 16  PTGQ-LHLGHFVGSLRSRVGLQDSHHQHLLLADAQALTDNADNPDKVRR-----NILEVA 69

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR- 162
                +          KT   + +    L  +  +  L  +              ++ R 
Sbjct: 70  LDYLAVG-----IDPTKTTICVQSCLPALNELTML-YLNFVTVARLERNPTIKSEIQMRG 123

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT---- 218
            +R+    FL   Y + QA D       +   +   G DQ   I    ++  R+      
Sbjct: 124 FERDIPAGFL--CYPVAQAADITA----FKATVVPVGEDQIPMIEQTNEIVRRVNRQIGQ 177

Query: 219 ---PKLFALTSPL--LTTASGT-KMGKTLSGAIWLNKE----MTSPYNFWQ--YWRNIDD 266
              P+  AL S +  L    G  KM K+L   I LN        +    +       I+D
Sbjct: 178 DLLPECKALLSNMARLPGFDGKAKMSKSLGNTIVLNASDKDIKKAVNAMYTDPNHLRIED 237

Query: 267 ------ADVVSFAKRLTT--LPMSEIDRMAKLQGKEINEAKKI----IATEITTMVHGRE 314
                   V ++          + E+    +  G      KK     +   IT M   RE
Sbjct: 238 PGQVEGNIVFTYLDAFDPNKEEVEELKAHYRRGGLGDGTVKKRLEGVLKELITPMRERRE 297

Query: 315 EAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLT 354
           E  K     M+          + T   + DEV  G+GL  
Sbjct: 298 ELAKDPDYIMDVLRQGTDKCRIITQQ-TLDEVKDGLGLFK 336


>gi|149636940|ref|XP_001513011.1| PREDICTED: similar to WARS protein [Ornithorhynchus anatinus]
          Length = 474

 Score = 44.0 bits (103), Expect = 0.049,   Method: Composition-based stats.
 Identities = 39/248 (15%), Positives = 83/248 (33%), Gaps = 31/248 (12%)

Query: 15  RGFIHQISN-PRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +  + LD   ++     Y G   ++ ++H GHL   +   WLQ   + P+ +
Sbjct: 137 RGIFFSHRDMNQVLDAYENKKPFYLYTGRGPSSEAMHLGHLIPFIFTKWLQDVFNVPLVI 196

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                         D+ + + +   +++            I  G       + ++  ++ 
Sbjct: 197 -----------QMTDDEKYLWKDLTLEQAYGYAVENAKDIIACGFDIKKTFIFSDLDYMG 245

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA--------YDFV 185
                   + +     + + ++F  V+       S    + ++  +QA            
Sbjct: 246 --MSPGFYKNV---VKIQKHVTFNQVKGIFGFTDSDCIGKISFPAIQAAPSFSNSFPQIF 300

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTASGTKMGKTLS 242
           +  K+  C +     DQ        D+  R+  PK   L +   P L  A  TKM  +  
Sbjct: 301 KDKKDVQCLIPC-AIDQDPYFRMTRDVAPRIGYPKPALLHSTFFPALQGAQ-TKMSASDP 358

Query: 243 G-AIWLNK 249
             +I+L  
Sbjct: 359 NSSIFLTD 366


>gi|121712682|ref|XP_001273952.1| tyrosyl-tRNA synthetase [Aspergillus clavatus NRRL 1]
 gi|119402105|gb|EAW12526.1| tyrosyl-tRNA synthetase [Aspergillus clavatus NRRL 1]
          Length = 385

 Score = 44.0 bits (103), Expect = 0.049,   Method: Composition-based stats.
 Identities = 39/228 (17%), Positives = 76/228 (33%), Gaps = 23/228 (10%)

Query: 18  IHQISNPRELDILCSQGVV-TAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGG 76
           + ++ NP  ++ + ++G     Y G   T    HAG+    + +      G   + L+  
Sbjct: 17  LAEVLNPEIIEKIIAEGRSPRIYWGTATTGRP-HAGYFVPAIKIAQFLAAGCDMVILLAD 75

Query: 77  GTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK---YGTGKTDALMLNNETWLC 133
               + +             + +Q  ++  +    S ++     T K   ++ ++     
Sbjct: 76  IHGFLDNLKA--------PIELVQHRVDFYRNAIISILRSVGVSTEKLTFVLGSSYQ-KS 126

Query: 134 SIKYIDLLREIGSFFSV-NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYD 192
               +D+ R          +    E V+        LS L   Y +LQ  D   L     
Sbjct: 127 PDYVMDVYRLCSLVSEHDAKKAGAEVVKQ--SDNCPLSGL--LYPVLQVLDEQYLN---- 178

Query: 193 CRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
              Q GG DQ        +   RL   +   L +P++    G KM  +
Sbjct: 179 VDAQFGGVDQRKLFAAAKEWLPRLGYKQRAHLLNPMVPGLHGGKMSAS 226


>gi|313680488|ref|YP_004058227.1| SSU ribosomal protein s4p [Oceanithermus profundus DSM 14977]
 gi|313153203|gb|ADR37054.1| SSU ribosomal protein S4P [Oceanithermus profundus DSM 14977]
          Length = 209

 Score = 44.0 bits (103), Expect = 0.050,   Method: Composition-based stats.
 Identities = 16/115 (13%), Positives = 43/115 (37%), Gaps = 18/115 (15%)

Query: 295 INEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLT 354
           + E +K         ++G  E           F+ +   + + T ++    +   +    
Sbjct: 58  LREKQK------MRRIYGISE-----KQFRNLFEEASKKKGV-TGTVFLRLLESRLD--N 103

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
           ++ + G A+S  +AR+ ++   I +    ++    +++  D  +        GKK
Sbjct: 104 VVYRLGIASSRKQARQLVRHGHIAVGGRKVTVPSYRVRPGDVIAVTE----AGKK 154


>gi|332283686|ref|YP_004415597.1| tryptophanyl-tRNA synthetase [Pusillimonas sp. T7-7]
 gi|330427639|gb|AEC18973.1| tryptophanyl-tRNA synthetase [Pusillimonas sp. T7-7]
          Length = 452

 Score = 43.7 bits (102), Expect = 0.050,   Method: Composition-based stats.
 Identities = 22/103 (21%), Positives = 41/103 (39%), Gaps = 16/103 (15%)

Query: 157 ESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL 216
           ++V  + + +  ++   F+Y +L A D +    N   ++ +G  DQ  ++    D+ +R 
Sbjct: 123 QNVARQQEADDGITMGLFSYPVLMAADILMFNAN---KVPVG-RDQIQHLEMARDIAQRF 178

Query: 217 -----KTPKLFAL-------TSPLLTTASGTKMGKTLSGAIWL 247
                +   LF L           L    G KM K+    I L
Sbjct: 179 NHLYGQGDDLFVLPEVQIDDEVATLPGLDGRKMSKSYDNTIPL 221


>gi|326386376|ref|ZP_08207999.1| tryptophanyl-tRNA synthetase [Novosphingobium nitrogenifigens DSM
           19370]
 gi|326209037|gb|EGD59831.1| tryptophanyl-tRNA synthetase [Novosphingobium nitrogenifigens DSM
           19370]
          Length = 339

 Score = 43.7 bits (102), Expect = 0.050,   Method: Composition-based stats.
 Identities = 34/221 (15%), Positives = 65/221 (29%), Gaps = 42/221 (19%)

Query: 41  GYDLTASSLHAGHLTQ-----LMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMR 95
           G   T + LH G+        +++       G   +  +    +I         +     
Sbjct: 6   GIQPTGN-LHLGNYLGAIRNWVLMQDEWTAKGATCLYFLADLHAISMPHQPATLAEN--T 62

Query: 96  SQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLS 155
            + +   +        S + +   +  A       WL        L        +NRM  
Sbjct: 63  REMVAALVSCGIDPDKSIL-FNQAQVPAHAE--LQWL--------LNGTARMGWLNRMTQ 111

Query: 156 -FESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
             +         +  S   F Y +LQA D + L +     +   G DQ  ++    D+ +
Sbjct: 112 WKDKAGK---NREGASVALFTYPVLQAADVL-LYQATHVPV---GEDQKQHLELARDIAQ 164

Query: 215 RLKT------PKLFALTSPLLT--------TASG-TKMGKT 240
           +           +F L  P++            G  KM K+
Sbjct: 165 KFNNDFASEEAPVFTLPDPIIPPEAARIMSLRDGSAKMSKS 205


>gi|297622733|ref|YP_003704167.1| RNA-binding S4 domain-containing protein [Truepera radiovictrix DSM
           17093]
 gi|297163913|gb|ADI13624.1| RNA-binding S4 domain protein [Truepera radiovictrix DSM 17093]
          Length = 83

 Score = 43.7 bits (102), Expect = 0.050,   Method: Composition-based stats.
 Identities = 10/59 (16%), Positives = 28/59 (47%)

Query: 337 PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           P  +   D+    + L   +  +G A +  +A+  ++S  +++N  + +  K +++  D
Sbjct: 4   PPDTDRFDDPEPTITLNDALKLSGLAQTGGQAKLMIQSGRVRVNGEVETRRKRKLREGD 62


>gi|38233242|ref|NP_939009.1| tryptophanyl-tRNA synthetase [Corynebacterium diphtheriae NCTC
           13129]
 gi|38199501|emb|CAE49152.1| tryptophanyl-tRNA synthetase [Corynebacterium diphtheriae]
          Length = 344

 Score = 43.7 bits (102), Expect = 0.050,   Method: Composition-based stats.
 Identities = 42/250 (16%), Positives = 78/250 (31%), Gaps = 32/250 (12%)

Query: 32  SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESR 91
           +Q       G   TA S H G+    +  +   +  ++    +    +I  D   R+   
Sbjct: 9   TQKKQRVLSGIQPTADSYHLGNYLGALKQWIELQDNYEAFYFIPDLHAITVDQDPRE--- 65

Query: 92  RMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVN 151
             +R + I    + +             ++         W        +L  +  F   +
Sbjct: 66  --LRERTIAGAAQLLALGIDPHKSTLFVQSHVPEHAELGW--------VLTCLTGFGEAS 115

Query: 152 RMLS-FESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGI 210
           RM    +    R     S     F Y +L A D + L +     +   G DQ  ++    
Sbjct: 116 RMTQFKDKSAKRGADRTSAGL--FTYPMLMAADIL-LYRPQFVPV---GEDQRQHLELTR 169

Query: 211 DLGERLKT--PKLFALTSPLLTTASGT---------KMGKTLSGAIWLNKEMTSPYNFWQ 259
            L ER  +   K F +   ++   +           KM K+ S    L   +  P    +
Sbjct: 170 TLAERFNSRFKKTFVVPDGIIPEGAAKIYDLQDPTSKMSKSGSNPKGLINLLDDPKVSAK 229

Query: 260 YWRN-IDDAD 268
             R+ + D D
Sbjct: 230 RIRSAVTDND 239


>gi|332796660|ref|YP_004458160.1| tryptophanyl-tRNA synthetase [Acidianus hospitalis W1]
 gi|332694395|gb|AEE93862.1| tryptophanyl-tRNA synthetase [Acidianus hospitalis W1]
          Length = 380

 Score = 43.7 bits (102), Expect = 0.050,   Method: Composition-based stats.
 Identities = 46/262 (17%), Positives = 82/262 (31%), Gaps = 35/262 (13%)

Query: 9   LSILSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSL--HAGHLTQLMLLFWLQK 65
           L ++  R       +    L           Y G    A SL  H GHL   +   WLQ+
Sbjct: 45  LHVMLRRDVFFSHRDLDLVLKDYEEGKGFFLYTG---RAPSLGMHIGHLVPFIFTRWLQE 101

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
                + +      I  D  F       +  ++ ++            I  G       +
Sbjct: 102 KFKVNLYI-----EITDDEKFMRN--PELTLEQTRQFA---YDNILDIIAVGFDPDRTFI 151

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
             +  ++ ++  +           + + L+F  VR+    E S +     Y  LQ     
Sbjct: 152 FQDTEYIRNMYPL--------ATKIAKKLTFSEVRATFGLENSSNIGIIFYPALQ--IAP 201

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGE---RLKTPKLFALTSPLLTTASGTKMGKTLS 242
            + +   C +  G  DQ        D+ E     K  ++ +   P LT   G KM  ++ 
Sbjct: 202 TMFEKKRCLIPAG-IDQDPYWRLQRDIAESLGYYKAAQIHSKFLPPLTGPEG-KMSSSIP 259

Query: 243 -GAIWLNKEMTSPYNFWQYWRN 263
             AI+L  +   P    +    
Sbjct: 260 ESAIYLTDD---PKTVERKIMK 278


>gi|257468924|ref|ZP_05633018.1| tryptophanyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185]
 gi|317063172|ref|ZP_07927657.1| tryptophanyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185]
 gi|313688848|gb|EFS25683.1| tryptophanyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185]
          Length = 328

 Score = 43.7 bits (102), Expect = 0.050,   Method: Composition-based stats.
 Identities = 21/100 (21%), Positives = 33/100 (33%), Gaps = 18/100 (18%)

Query: 156 FESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER 215
            + +         L      Y +L A D +     YD  +   G DQ  ++    D+  +
Sbjct: 111 KDKIAKGFTPNAGL----MTYPVLMAADILI----YDTDIVPVGKDQKQHLEMTRDIAMK 162

Query: 216 LKTP---KLFALTSPLLT-------TASGTKMGKTLSGAI 245
                  +LF L  PL+           G KM K+    I
Sbjct: 163 FNQQYGVELFKLPDPLIMDNLAVIPGTDGQKMSKSYGNTI 202


>gi|241950155|ref|XP_002417800.1| tryptophan-tRNA ligase, putative; tryptophanyl-tRNA synthetase,
           cytoplasmic, putative [Candida dubliniensis CD36]
 gi|223641138|emb|CAX45515.1| tryptophan-tRNA ligase, putative [Candida dubliniensis CD36]
          Length = 424

 Score = 43.7 bits (102), Expect = 0.050,   Method: Composition-based stats.
 Identities = 14/60 (23%), Positives = 24/60 (40%), Gaps = 1/60 (1%)

Query: 15  RGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +   +  L   G     Y G   ++ S+H GH+   +   WLQ+    P+ +
Sbjct: 73  RGVFFSQRDLDRILDLYEHGEPFFLYTGRGPSSDSMHLGHMVPFIFTKWLQEVFDVPLVI 132


>gi|94970886|ref|YP_592934.1| tryptophanyl-tRNA synthetase [Candidatus Koribacter versatilis
           Ellin345]
 gi|94552936|gb|ABF42860.1| tryptophanyl-tRNA synthetase [Candidatus Koribacter versatilis
           Ellin345]
          Length = 359

 Score = 43.7 bits (102), Expect = 0.050,   Method: Composition-based stats.
 Identities = 39/235 (16%), Positives = 74/235 (31%), Gaps = 46/235 (19%)

Query: 41  GYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           G   T   LH GH    L     LQ+  +     +    ++  + +          S   
Sbjct: 12  GMRPTGK-LHLGHYVGALQNWVKLQEQ-YDCFYFVADWHALTTNYAD--------TSDIK 61

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
              IE I    S+ +     K+   + +        ++ +L   +     +  +    + 
Sbjct: 62  ASCIELIIDFLSAGLD--PEKSTLFIQS-----HVPQHAELYLLLSMITPLGWLERVPTY 114

Query: 160 RSRLKR--EQSLSFLEFN-YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL 216
           + +L+   ++ L    F  Y  LQ  D +     Y   + +G  DQ  ++    ++  R 
Sbjct: 115 KEQLENIKDKDLGMYGFLGYPALQTADIIIYKAKY---VPVG-QDQVPHLEISREIARRF 170

Query: 217 KT---------------PKLFALTSPLLT------TASGTKMGKTLSGAIWLNKE 250
                              +F    PLLT         G KM K+   +I L+  
Sbjct: 171 HQFYPRKMHAGIAAPERDYVFPEPKPLLTPAAKLPGTDGRKMSKSYGNSILLSDP 225


>gi|120437575|ref|YP_863261.1| tryptophanyl-tRNA synthetase [Gramella forsetii KT0803]
 gi|117579725|emb|CAL68194.1| tryptophanyl-tRNA synthetase [Gramella forsetii KT0803]
          Length = 322

 Score = 43.7 bits (102), Expect = 0.051,   Method: Composition-based stats.
 Identities = 42/275 (15%), Positives = 78/275 (28%), Gaps = 42/275 (15%)

Query: 50  HAGHLT-QLMLLFWLQKT-GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIK 107
           H G+L   +M    +     +     +    S+        E+ R          +    
Sbjct: 15  HLGNLLGAIMPAIEMANQPDNDSFIFIADMHSLTQIKD--AETLRQNTYSVAATWLACGL 72

Query: 108 GIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ 167
            I  S     +       L   +W            +  FF   R+    S + +  R +
Sbjct: 73  DIERSVFYRQSDIPQVTEL---SWY-----------LSCFFPYQRLTLAHSFKDKADRLE 118

Query: 168 SLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSP 227
            ++   F+Y +L A D +     YD  +   G DQ  +I    D+  R           P
Sbjct: 119 DINSGLFSYPMLMAADILL----YDAEIVPVGKDQLQHIEMTRDVASRFHAKMGEVFVMP 174

Query: 228 ---------LLTTASGTKMGKTLSGAIWL--NKEMTSPYNFWQYWRNID-----DADVVS 271
                     +    G KM K+    I +    +            +       D D  +
Sbjct: 175 EANVQKDSMYVPGTDGAKMSKSKENTINIFQTDKKLRKQIMSIDTDSTPLEEPKDPDTCN 234

Query: 272 FAKRL----TTLPMSEIDRMAKLQGKEINEAKKII 302
                    T   ++E+ +  +  G     AK+ +
Sbjct: 235 VFALYKIMATEGQITEMRKNYEAGGYGYGHAKQAL 269


>gi|114654711|ref|XP_001158800.1| PREDICTED: tryptophanyl-tRNA synthetase isoform 5 [Pan troglodytes]
          Length = 455

 Score = 43.7 bits (102), Expect = 0.051,   Method: Composition-based stats.
 Identities = 39/248 (15%), Positives = 84/248 (33%), Gaps = 31/248 (12%)

Query: 15  RGFIHQISN-PRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +  + LD   ++     Y G   ++ ++H GHL   +   WLQ   + P+ +
Sbjct: 118 RGIFFSHRDMNQVLDAYENKKPFYLYTGRGPSSEAMHVGHLIPFIFTKWLQDVFNVPLVI 177

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                         D+ + + +   + +            I  G       + ++  ++ 
Sbjct: 178 -----------QMTDDEKYLWKDLTLDQAYSYAVENAKDIIACGFDINKTFIFSDLDYMG 226

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA-----YDFVELA 188
                   + +     + + ++F  V+       S    + ++  +QA       F ++ 
Sbjct: 227 --MSSGFYKNV---VKIQKHVTFNQVKGIFGFTDSDCIGKISFPAIQAAPSFSNSFPQIF 281

Query: 189 K---NYDCRLQMGGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTASGTKMGKTLS 242
           +   +  C +     DQ        D+  R+  PK   L +   P L  A  TKM  +  
Sbjct: 282 RDRTDIQCLIPC-AIDQDPYFRMTRDVAPRIGYPKPALLHSTFFPALQGAQ-TKMSASDP 339

Query: 243 G-AIWLNK 249
             +I+L  
Sbjct: 340 NSSIFLTD 347


>gi|34580573|ref|ZP_00142053.1| lysyl-tRNA synthetase [Rickettsia sibirica 246]
 gi|28261958|gb|EAA25462.1| lysyl-tRNA synthetase [Rickettsia sibirica 246]
          Length = 522

 Score = 43.7 bits (102), Expect = 0.051,   Method: Composition-based stats.
 Identities = 22/135 (16%), Positives = 41/135 (30%), Gaps = 8/135 (5%)

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            DF           +M G D   N     ++   L       L   L    +G K+ K+ 
Sbjct: 236 PDFGMRWAALKVDYEMYGKDHLANARLYSEICRILGGKPPVQLCYELFLDENGEKISKSK 295

Query: 242 SGAIWLNK-EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINE 297
             +I ++     +P      +      +     +    +    +D       K   E + 
Sbjct: 296 GNSISIDDWLKYAPVESMALFMY---QNPTRAKRLFFDVIPKNVDEYITFNQKYHLEEDR 352

Query: 298 AKKIIATEITTMVHG 312
           AK+  A  +  + HG
Sbjct: 353 AKR-FANPVYHIHHG 366


>gi|303322577|ref|XP_003071280.1| tryptophanyl-tRNA synthetase, cytoplasmic, putative [Coccidioides
           posadasii C735 delta SOWgp]
 gi|240110982|gb|EER29135.1| tryptophanyl-tRNA synthetase, cytoplasmic, putative [Coccidioides
           posadasii C735 delta SOWgp]
          Length = 443

 Score = 43.7 bits (102), Expect = 0.051,   Method: Composition-based stats.
 Identities = 15/61 (24%), Positives = 23/61 (37%), Gaps = 1/61 (1%)

Query: 15  RGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +  + LD   +      Y G   ++ +LH GH        WLQ     P+ +
Sbjct: 79  RGLFFSHRDFDKILDKYEAGEPFFMYTGRGPSSDALHLGHTIPFSFTKWLQDVFDVPLVI 138

Query: 74  M 74
           M
Sbjct: 139 M 139


>gi|166154800|ref|YP_001654918.1| tryptophanyl-tRNA synthetase [Chlamydia trachomatis 434/Bu]
 gi|166155675|ref|YP_001653930.1| tryptophanyl-tRNA synthetase [Chlamydia trachomatis
           L2b/UCH-1/proctitis]
 gi|301336076|ref|ZP_07224320.1| tryptophanyl-tRNA synthetase [Chlamydia trachomatis L2tet1]
 gi|165930788|emb|CAP04285.1| tryptophanyl-tRNA synthetase [Chlamydia trachomatis 434/Bu]
 gi|165931663|emb|CAP07239.1| tryptophanyl-tRNA synthetase [Chlamydia trachomatis
           L2b/UCH-1/proctitis]
          Length = 346

 Score = 43.7 bits (102), Expect = 0.051,   Method: Composition-based stats.
 Identities = 40/234 (17%), Positives = 83/234 (35%), Gaps = 35/234 (14%)

Query: 44  LTASSLHAGHLTQ-LMLLFWLQ-KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +M    LQ  + +    ++    ++        ++R+    +E+ +
Sbjct: 12  PTGK-LHLGHWIGSIMNRLQLQNDSRYDCFFIIADLHTL------TTKTRK----EEVLQ 60

Query: 102 NIEKIKGIFSSFIKYG-TGKTDALMLNNE--TWLCSIKYIDLLREIGSFFSVNRMLSFES 158
               I  + + ++  G   +  A+ L +             +L  +     +      E 
Sbjct: 61  IDNHIYDVLADWLSVGINPEKSAIYLQSAIPEIYELNLIFSMLTPL--NHIMGIPSIKEM 118

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
             +    E+SLS     Y +LQ+ D + LAK +   +   G D   ++    D+ +    
Sbjct: 119 ASNASLNEESLSHGLIGYPVLQSADIL-LAKAHLVPV---GKDNEAHVELTRDIAKTFNR 174

Query: 219 PKLFALTSP----------LLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYW 261
             L+    P           L   +G  KM K+ + AI+L+ +  +     +  
Sbjct: 175 --LYGEVFPEPDILQGELTALVGTNGQGKMSKSANNAIYLSDDAKTVQEKIRKL 226


>gi|332972975|gb|EGK10915.1| tryptophan--tRNA ligase [Kingella kingae ATCC 23330]
          Length = 336

 Score = 43.7 bits (102), Expect = 0.052,   Method: Composition-based stats.
 Identities = 41/212 (19%), Positives = 72/212 (33%), Gaps = 32/212 (15%)

Query: 174 FNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK---TPKLFAL------ 224
           ++Y IL   D + + +  D  +   G DQ  ++    D+ +R       +LF L      
Sbjct: 135 YSYPILMTADIL-MFRANDVPV---GRDQIQHVEMARDIAQRFNHRFGKELFVLPEAKTD 190

Query: 225 -TSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSE 283
               LL    G KM K+    I L +         Q   N          K +T L   E
Sbjct: 191 ENVHLLVGLDGRKMSKSYGNTIPLFQTPKQ----RQKAVN----------KIVTNL--KE 234

Query: 284 IDRMAKLQGKEINEAKKIIATEITTMVHGREEAE-KAATAAMECFDMSIHSQHMPTISIS 342
                +     + E  +  AT   T+   +   +  A   A +     I  +      + 
Sbjct: 235 PGEPKQKNESPLFEIYQAFATPSETVAFEQALNDGLAWGEAKKILSAKIGEELDSKTDVY 294

Query: 343 KDEVSRGMGLLTLIVKAGFATSTNEARRHLKS 374
            D ++    +  ++ +AG + +  EAR  L  
Sbjct: 295 NDLIANPSRIEDIL-QAGASKARVEARELLAQ 325


>gi|291543409|emb|CBL16518.1| Uncharacterized conserved protein [Ruminococcus sp. 18P13]
          Length = 73

 Score = 43.7 bits (102), Expect = 0.052,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 25/55 (45%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           + L +L+  AG   +   A+  ++   +K+N  I +    +I+  D    G  +L
Sbjct: 13  IKLDSLLKYAGLTDTGGFAKELIQGGQVKVNGEICTMRGKKIRSGDVVEAGEYRL 67


>gi|222147344|ref|YP_002548301.1| tryptophanyl-tRNA synthetase [Agrobacterium vitis S4]
 gi|221734334|gb|ACM35297.1| tryptophan-tRNA ligase [Agrobacterium vitis S4]
          Length = 354

 Score = 43.7 bits (102), Expect = 0.052,   Method: Composition-based stats.
 Identities = 59/379 (15%), Positives = 114/379 (30%), Gaps = 98/379 (25%)

Query: 31  CSQGVVTAYIGYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMG--GGTSIIGDPSFR 87
            S+     + G   T + LH G+    +     LQ+       ++     T+ +     R
Sbjct: 1   MSEFQPLVFSGVQPTGN-LHLGNYLGAIRKFVALQENNDCMYCVVDLHALTAQLVHEDMR 59

Query: 88  DESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSF 147
            + R  + +  +   I+ +K I  +  +       A + N                +   
Sbjct: 60  GQIRS-ITAAFLAAGIDPVKHIVFNQSQVPQHAELAWIFN---------------CVARI 103

Query: 148 FSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNII 207
             +NRM  F+    + + + SL    F Y  L A D + + +     +   G DQ  ++ 
Sbjct: 104 GWMNRMTQFKDKAGKDREQASLGL--FAYPSLMAADIL-VYRATHVPV---GDDQKQHLE 157

Query: 208 CGIDL-----------GER--------LKTPKLFA---LTSPLLTTA--------SGTK- 236
              D+                      +    + A   +  PL+            GTK 
Sbjct: 158 LTRDIAMKFNLDFAQQIRPTGLGIDITVGNEPVHAYFPMVEPLIDGPAPRVMSLKDGTKK 217

Query: 237 MGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN 296
           M K+                                    + L    +   A+   K+I 
Sbjct: 218 MSKSDP----------------------------------SDLSRINLMDDAEAIAKKIR 243

Query: 297 EAKK---IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLL 353
           +AK     + +E   +  GR EA+          D    ++ +      +  V +   L+
Sbjct: 244 KAKTDPDALPSETDGLA-GRPEADNLVGIYAALADK-TKAEVLAEFGGQQFSVFKPA-LI 300

Query: 354 TLIVKAGFATSTNEARRHL 372
            L V+   +  T E RR +
Sbjct: 301 ELAVEV-LSPITGEMRRLM 318


>gi|229586638|ref|YP_002845139.1| lysyl-tRNA synthetase [Rickettsia africae ESF-5]
 gi|259511532|sp|C3PN86|SYK_RICAE RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|228021688|gb|ACP53396.1| Lysyl-tRNA synthetase [Rickettsia africae ESF-5]
          Length = 522

 Score = 43.7 bits (102), Expect = 0.052,   Method: Composition-based stats.
 Identities = 22/135 (16%), Positives = 41/135 (30%), Gaps = 8/135 (5%)

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            DF           +M G D   N     ++   L       L   L    +G K+ K+ 
Sbjct: 236 PDFGMRWAALKVDYEMYGKDHLANARLYSEICRILGGKPPVQLCYELFLDENGEKISKSK 295

Query: 242 SGAIWLNK-EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINE 297
             +I ++     +P      +      +     +    +    +D       K   E + 
Sbjct: 296 GNSISIDDWLKYAPVESMALFMY---QNPTRAKRLFFDVIPKNVDEYITFNQKYHLEEDR 352

Query: 298 AKKIIATEITTMVHG 312
           AK+  A  +  + HG
Sbjct: 353 AKR-FANPVYHIHHG 366


>gi|291535186|emb|CBL08298.1| tryptophanyl-tRNA synthetase [Roseburia intestinalis M50/1]
          Length = 361

 Score = 43.7 bits (102), Expect = 0.052,   Method: Composition-based stats.
 Identities = 42/240 (17%), Positives = 72/240 (30%), Gaps = 43/240 (17%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     LQ +G +  I +M      I D            +     
Sbjct: 12  PTGK-LHVGHYVGSLKRRVELQNSGEYDKIFIM------IADAQA--------LTDNADN 56

Query: 102 NIEKIKGIFSSFIKY-----GTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSF 156
             +    I    + Y        K+D  + +  T L  + +  +     S    N  +  
Sbjct: 57  PAKVRSNIMEVALDYLSVGIDPAKSDIFIQSYVTELTELTFYYMNLVTVSRLQRNPTVKS 116

Query: 157 ESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL 216
           E      +    + F  F Y I QA D           + +G  DQ   +    ++  + 
Sbjct: 117 EIQMRNFETSIPVGF--FCYPISQAADITAFHA---TTVPVG-EDQMPMLEQTKEIVHKF 170

Query: 217 KTPKLFALTSPL-----------LTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNI 264
                  LT P            L    G  KM K+L   I+L++      +  +   ++
Sbjct: 171 NAVYGETLTDPQILLPENKACLRLPGTDGKAKMSKSLGNCIYLSEPEA---DVKKKIMSM 227


>gi|114776453|ref|ZP_01451498.1| 16S rRNA uridine-516 pseudouridylate synthase and related
           pseudouridylate synthase [Mariprofundus ferrooxydans
           PV-1]
 gi|114553283|gb|EAU55681.1| 16S rRNA uridine-516 pseudouridylate synthase and related
           pseudouridylate synthase [Mariprofundus ferrooxydans
           PV-1]
          Length = 289

 Score = 43.7 bits (102), Expect = 0.052,   Method: Composition-based stats.
 Identities = 10/40 (25%), Positives = 18/40 (45%), Gaps = 1/40 (2%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           +   G   S  EA R +++  + IN  +I    + +K  D
Sbjct: 49  LAHCGLC-SRREADRWIQAGRVSINGQLIEAPGVIVKSGD 87


>gi|260641988|ref|ZP_05859178.1| ribosomal large subunit pseudouridine synthase B [Bacteroides
           finegoldii DSM 17565]
 gi|260624005|gb|EEX46876.1| ribosomal large subunit pseudouridine synthase B [Bacteroides
           finegoldii DSM 17565]
          Length = 253

 Score = 43.7 bits (102), Expect = 0.053,   Method: Composition-based stats.
 Identities = 12/71 (16%), Positives = 30/71 (42%), Gaps = 1/71 (1%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           + +  + L   +  AG   S  EA   + +  + +N  +++    +IK  D        +
Sbjct: 13  DPNEPIRLNKFLANAGVC-SRREADEFITAGVVSVNGEVVTELGTKIKRSDVVKFHEEPV 71

Query: 405 SFGKKNHIICH 415
           S  +K +++ +
Sbjct: 72  SIERKVYVLLN 82


>gi|87199318|ref|YP_496575.1| pseudouridine synthase, Rsu [Novosphingobium aromaticivorans DSM
           12444]
 gi|87134999|gb|ABD25741.1| Pseudouridine synthase, Rsu [Novosphingobium aromaticivorans DSM
           12444]
          Length = 270

 Score = 43.7 bits (102), Expect = 0.053,   Method: Composition-based stats.
 Identities = 10/45 (22%), Positives = 21/45 (46%), Gaps = 1/45 (2%)

Query: 348 RGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
            G  +  L+ +AG A S  E  R ++   +KI + +++     + 
Sbjct: 27  EGDRIAKLLARAGIA-SRREVERMIEEGRVKIGDEVVTTPATLLT 70


>gi|295109334|emb|CBL23287.1| tryptophanyl-tRNA synthetase [Ruminococcus obeum A2-162]
          Length = 356

 Score = 43.7 bits (102), Expect = 0.053,   Method: Composition-based stats.
 Identities = 46/297 (15%), Positives = 89/297 (29%), Gaps = 55/297 (18%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGH--KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +     LQ +G   +   ++    ++  +    ++ R+ +    + 
Sbjct: 11  PTGK-LHVGHYVGSLKERVKLQNSGDYDEVYIMIADAQALTDNAEHPEKVRQNIIQVALD 69

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
                I             K+   + +    L  + +  +     +    N  +  E   
Sbjct: 70  YLACGI----------DPAKSTIFIQSMVPELTELTFYYMNLVTVARVQRNPTVKSEIQM 119

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
              +    + F  F Y I QA D       +   + +G  DQ   I    ++  +  T  
Sbjct: 120 RNFEASIPVGF--FCYPISQAADITAFRATH---VPVG-EDQMPMIEQCKEIVHKFNTVY 173

Query: 221 LFALTSPL-----------LTTASGT-KMGKTLSGAIWL-NKEMTSPYNFWQYW-----R 262
              LT P            L    G  KM K+L   I+L ++E          +      
Sbjct: 174 GETLTDPKIVLPSNKACLRLPGIDGKAKMSKSLGNCIYLSDEEADVKKKIMSMFTDPNHL 233

Query: 263 NIDD------ADVVSFAKRL-------TTLP----MSEIDRMAKLQGKEINEAKKII 302
            + D        V  + +           LP    + E++   +  G    + KK +
Sbjct: 234 RVQDPGRVEGNPVFIYLEAFCRDEYFPEFLPEYQNLEELEDHYRRGGLGDVKVKKFL 290


>gi|69246351|ref|ZP_00603907.1| Tryptophanyl-tRNA synthetase, class Ib [Enterococcus faecium DO]
 gi|257878161|ref|ZP_05657814.1| tryptophanyl-tRNA synthetase [Enterococcus faecium 1,230,933]
 gi|257881055|ref|ZP_05660708.1| tryptophanyl-tRNA synthetase [Enterococcus faecium 1,231,502]
 gi|257889640|ref|ZP_05669293.1| tryptophanyl-tRNA synthetase [Enterococcus faecium 1,231,410]
 gi|257898674|ref|ZP_05678327.1| tryptophanyl-tRNA synthetase [Enterococcus faecium Com15]
 gi|258616333|ref|ZP_05714103.1| tryptophanyl-tRNA synthetase II [Enterococcus faecium DO]
 gi|260559208|ref|ZP_05831394.1| tryptophanyl-tRNA synthetase [Enterococcus faecium C68]
 gi|289565816|ref|ZP_06446258.1| tryptophanyl-tRNA synthetase [Enterococcus faecium D344SRF]
 gi|293569783|ref|ZP_06680870.1| tryptophanyl-tRNA synthetase [Enterococcus faecium E1071]
 gi|293572579|ref|ZP_06683553.1| tryptophanyl-tRNA synthetase [Enterococcus faecium E980]
 gi|294614010|ref|ZP_06693940.1| tryptophanyl-tRNA synthetase [Enterococcus faecium E1636]
 gi|294619643|ref|ZP_06699065.1| tryptophanyl-tRNA synthetase [Enterococcus faecium E1679]
 gi|294623306|ref|ZP_06702168.1| tryptophanyl-tRNA synthetase [Enterococcus faecium U0317]
 gi|68195304|gb|EAN09755.1| Tryptophanyl-tRNA synthetase, class Ib [Enterococcus faecium DO]
 gi|257812389|gb|EEV41147.1| tryptophanyl-tRNA synthetase [Enterococcus faecium 1,230,933]
 gi|257816713|gb|EEV44041.1| tryptophanyl-tRNA synthetase [Enterococcus faecium 1,231,502]
 gi|257826000|gb|EEV52626.1| tryptophanyl-tRNA synthetase [Enterococcus faecium 1,231,410]
 gi|257836586|gb|EEV61660.1| tryptophanyl-tRNA synthetase [Enterococcus faecium Com15]
 gi|260074965|gb|EEW63281.1| tryptophanyl-tRNA synthetase [Enterococcus faecium C68]
 gi|289162359|gb|EFD10217.1| tryptophanyl-tRNA synthetase [Enterococcus faecium D344SRF]
 gi|291587531|gb|EFF19408.1| tryptophanyl-tRNA synthetase [Enterococcus faecium E1071]
 gi|291593117|gb|EFF24696.1| tryptophanyl-tRNA synthetase [Enterococcus faecium E1636]
 gi|291594117|gb|EFF25569.1| tryptophanyl-tRNA synthetase [Enterococcus faecium E1679]
 gi|291597274|gb|EFF28463.1| tryptophanyl-tRNA synthetase [Enterococcus faecium U0317]
 gi|291607362|gb|EFF36710.1| tryptophanyl-tRNA synthetase [Enterococcus faecium E980]
          Length = 336

 Score = 43.7 bits (102), Expect = 0.053,   Method: Composition-based stats.
 Identities = 55/346 (15%), Positives = 101/346 (29%), Gaps = 61/346 (17%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
            T   LH GH    +      +        +     +I D      +      +++  N+
Sbjct: 11  PTGK-LHLGHYVGSLKTRVAMQADEDNQLFV-----MIADMQ--ALTDNAKNPEKVSSNV 62

Query: 104 EKIKGIFSSFIKY-----GTGKTDALMLNNETWLCSIKYIDL-LREIGSFFSVNRMLSFE 157
                     + Y        K+   + +    L  +    L L  +G     N  +  E
Sbjct: 63  ------LQVALDYLAVGLDPAKSTLFIQSQIPELAELTMYYLNLVSVGR-VRRNPTVKTE 115

Query: 158 SVRSRLKREQSLSFLEFNYMILQAYDFVELAKN--------YDCRLQMGGSDQWGNIICG 209
             + +        F  F Y + QA D      N             Q     Q  N   G
Sbjct: 116 IEQKKFGESVPTGF--FIYPVSQAADITAFKANLVPVGEDQKPMLEQTQEIVQSFNHTYG 173

Query: 210 IDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQ-YWRN---- 263
             L E         +    L    G  KM K+L   I+++     P +  Q    +    
Sbjct: 174 EVLVEPKGVFPPKGMGR--LPGIDGNGKMSKSLGNGIYISD----PADVLQKKVMSMYTD 227

Query: 264 -----------IDDADVVSFAKRL-TTLP-MSEIDRMAKLQGKEINEAKKIIAT----EI 306
                      ++   V ++     T    + E+    +  G    + K+ +      E 
Sbjct: 228 PNHIHVQDPGQVEGNMVFTYLDVFGTDKEAIEEMKAHYRRGGLGDVKIKRYLIDVLEAEF 287

Query: 307 TTMVHGREEAEKAATAAME-CFDMSIHSQHMPTISISKDEVSRGMG 351
             +   REE EK  +A ME     S  +  +   ++S+ + + G+ 
Sbjct: 288 APIRARREELEKDPSAVMEILRKGSEEAAKVAAQTLSEVKSAMGIN 333


>gi|126290236|ref|XP_001367513.1| PREDICTED: similar to WARS protein [Monodelphis domestica]
          Length = 476

 Score = 43.7 bits (102), Expect = 0.053,   Method: Composition-based stats.
 Identities = 38/248 (15%), Positives = 81/248 (32%), Gaps = 31/248 (12%)

Query: 15  RGFIHQISN-PRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +    LD   ++     Y G   ++ ++H GHL   +   WLQ   + P+ +
Sbjct: 139 RGIFFSHRDMSNILDAYENKKPFYLYTGRGPSSEAMHVGHLIPFIFTKWLQDVFNVPLVI 198

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                         D+ + + +   +++            I  G       + ++  ++ 
Sbjct: 199 -----------QMTDDEKYLWKELTLEQAYGYTIENAKDIIACGFDINKTFIFSDLEYMG 247

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA--------YDFV 185
                   + +     + + ++F  V+       S    + ++  +QA            
Sbjct: 248 --SSPGFYKNV---VKIQKHVTFNQVKGIFGFTDSDCIGKISFPAIQAAPSFSNSFPQIF 302

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTASGTKMGKTLS 242
           +   +  C +     DQ        D+  R+  PK   L +   P L  A  TKM  +  
Sbjct: 303 KDRTDIQCLIPC-AIDQDPYFRMTRDVAPRIGYPKPALLHSTFFPALQGAQ-TKMSASDP 360

Query: 243 G-AIWLNK 249
             +I+L  
Sbjct: 361 NSSIFLTD 368


>gi|158312624|ref|YP_001505132.1| tryptophanyl-tRNA synthetase [Frankia sp. EAN1pec]
 gi|158108029|gb|ABW10226.1| tryptophanyl-tRNA synthetase [Frankia sp. EAN1pec]
          Length = 353

 Score = 43.7 bits (102), Expect = 0.053,   Method: Composition-based stats.
 Identities = 32/226 (14%), Positives = 69/226 (30%), Gaps = 37/226 (16%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   T    H G+    +         ++ I  +    +             +   ++  
Sbjct: 26  GIKPTGDP-HLGNYIGAIRPALDLAATYESIYFIADYHA-------------LTSIRDRA 71

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           +     + + +++I  G      +           +   +L  +     +NR  ++++ R
Sbjct: 72  KFAAYTRSVAATWITLGLDPERTVFYRQSDVPEIFELTWILSCVTGKGLMNRAHAYKAAR 131

Query: 161 SRLKR------EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
            R         +  ++   FNY IL A D + +       +   G DQ  ++    D+  
Sbjct: 132 DRNAESGVADLDAGVNMGLFNYPILMAVDILVM----GADVVPVGQDQSQHLEIAADIAG 187

Query: 215 RLKT--PKLFALTSP-----------LLTTASGTKMGKTLSGAIWL 247
                   +F+L  P            +    G KM K+    I L
Sbjct: 188 SFNHLYGDVFSLKIPEAVLPSGANARTMPGTDGRKMSKSYGNTIPL 233


>gi|119358165|ref|YP_912809.1| 30S ribosomal protein S4 [Chlorobium phaeobacteroides DSM 266]
 gi|152060943|sp|A1BJ08|RS4_CHLPD RecName: Full=30S ribosomal protein S4
 gi|119355514|gb|ABL66385.1| SSU ribosomal protein S4P [Chlorobium phaeobacteroides DSM 266]
          Length = 203

 Score = 43.7 bits (102), Expect = 0.053,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 23/57 (40%), Gaps = 8/57 (14%)

Query: 349 GMGLLTLI--------VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
           G  L+ L+         ++GFA S + AR+ +    + IN   ++     +   +  
Sbjct: 84  GDNLVKLLERRFDNVVFRSGFAASRSAARQLVTHGHLTINGKKVNIPSYLLTPGELI 140


>gi|309388981|gb|ADO76861.1| tryptophanyl-tRNA synthetase [Halanaerobium praevalens DSM 2228]
          Length = 334

 Score = 43.7 bits (102), Expect = 0.054,   Method: Composition-based stats.
 Identities = 33/230 (14%), Positives = 70/230 (30%), Gaps = 32/230 (13%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
            T   LH GH    +      +  +    ++    ++    +  D   ++  S+++++  
Sbjct: 15  PTGK-LHLGHYVGSLQNRVKLQNEYDTFLIIADVQALT---TNFDHPEKL--SEDVRQVA 68

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL 163
                           KT   + +        +  +L        +VN++    +++S  
Sbjct: 69  RDYLAAG-----IDPEKTTIFVQS-----LVPEIAELTVLYSMIVTVNQLRHNPTIKS-- 116

Query: 164 KREQSLSFLEFNYMILQAYDFVELAKNY-DCRLQMGGSDQWGNIICGIDLGERLKT---- 218
              +   + E +Y  L           +    L   G DQ  +I     +  +       
Sbjct: 117 -EAEQYGYQEMSYGFLGYPVSQAADITFCQANLVPVGEDQIPHIEQTRKIVRKFNNMYGE 175

Query: 219 ----PKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
               P+      P L    G  KM K+L+ AI+L+          Q    
Sbjct: 176 VFPEPEALISDFPRLIGLDGKNKMSKSLNNAIYLSDSK---EKVSQKIMK 222


>gi|238878368|gb|EEQ42006.1| tryptophanyl-tRNA synthetase [Candida albicans WO-1]
          Length = 424

 Score = 43.7 bits (102), Expect = 0.054,   Method: Composition-based stats.
 Identities = 14/60 (23%), Positives = 24/60 (40%), Gaps = 1/60 (1%)

Query: 15  RGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +   +  L   G     Y G   ++ S+H GH+   +   WLQ+    P+ +
Sbjct: 73  RGVFFSQRDLDRILDLYEHGEPFFLYTGRGPSSDSMHLGHMVPFIFTKWLQEVFDVPLVI 132


>gi|68479103|ref|XP_716357.1| hypothetical protein CaO19.12691 [Candida albicans SC5314]
 gi|68479232|ref|XP_716295.1| hypothetical protein CaO19.5226 [Candida albicans SC5314]
 gi|46437961|gb|EAK97299.1| hypothetical protein CaO19.5226 [Candida albicans SC5314]
 gi|46438024|gb|EAK97361.1| hypothetical protein CaO19.12691 [Candida albicans SC5314]
          Length = 424

 Score = 43.7 bits (102), Expect = 0.054,   Method: Composition-based stats.
 Identities = 14/60 (23%), Positives = 24/60 (40%), Gaps = 1/60 (1%)

Query: 15  RGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +   +  L   G     Y G   ++ S+H GH+   +   WLQ+    P+ +
Sbjct: 73  RGVFFSQRDLDRILDLYEHGEPFFLYTGRGPSSDSMHLGHMVPFIFTKWLQEVFDVPLVI 132


>gi|319940195|ref|ZP_08014548.1| tryptophanyl-tRNA synthetase [Streptococcus anginosus 1_2_62CV]
 gi|319810666|gb|EFW06996.1| tryptophanyl-tRNA synthetase [Streptococcus anginosus 1_2_62CV]
          Length = 341

 Score = 43.7 bits (102), Expect = 0.055,   Method: Composition-based stats.
 Identities = 48/292 (16%), Positives = 80/292 (27%), Gaps = 66/292 (22%)

Query: 44  LTASSLHAGHLTQ-LMLLFWLQKTGHKPISLM----GGGTSIIGDPSFRDESRRMMRSQE 98
            T   LH GH    L     LQ  G   + +        T    DP+             
Sbjct: 12  PTGK-LHIGHYVGSLRNRVLLQDEGKYELFVFLADQQALTDHAKDPN------------- 57

Query: 99  IQENIEKIKGIFSSFIK--YGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSF 156
               +E I  +   ++       KT   + +    L  +    +     +    N  +  
Sbjct: 58  --TIVESIGNVALDYLAAGLDPEKTTIFIQSQIPELSELSMYYMNLVSLARLERNPTVKS 115

Query: 157 ESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL 216
           E  +          FL   Y I QA D      NY   + +G +DQ   I    ++    
Sbjct: 116 EIAQKGFGESIPTGFL--VYPIAQAADITAFKANY---VPVG-NDQKPMIEQTREIVRSF 169

Query: 217 KTP-------------KLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
                                   L       KM K+L+  I+L+ +M            
Sbjct: 170 NHTYNCDVLVEPEGIYPQNEAAGRLPGLDGNAKMSKSLNNGIYLSDDM------------ 217

Query: 264 IDDADVVSFAKRLTTLPMSEIDRMAKLQG----------KEINEAKKIIATE 305
             D          T     +I+   K++G              +A++I A +
Sbjct: 218 --DTLQKKVMSMYTDPDHIKIEDPGKIEGNMVFHYLDVFGRPEDAQEITAMK 267


>gi|222056098|ref|YP_002538460.1| tryptophanyl-tRNA synthetase [Geobacter sp. FRC-32]
 gi|221565387|gb|ACM21359.1| tryptophanyl-tRNA synthetase [Geobacter sp. FRC-32]
          Length = 327

 Score = 43.7 bits (102), Expect = 0.055,   Method: Composition-based stats.
 Identities = 39/227 (17%), Positives = 65/227 (28%), Gaps = 45/227 (19%)

Query: 41  GYDLTASSLHAGHL--TQLMLLFWLQKTGHKPISLMGGG----TSIIGDPSFRDESRRMM 94
           G   T   LH GH        L   Q+   +            T        RD  R M 
Sbjct: 9   GMRPTGK-LHLGHYHGVLSNWLELQQEF--ECFFFAADWHSLTTEYANTEGIRDNIRDM- 64

Query: 95  RSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRML 154
               + + +                K+   +         +     L  + S  +    L
Sbjct: 65  ----VLDWLA---------FGIDPDKSTVFIQ------SQVPQHAELNLVLSMITPVSWL 105

Query: 155 SFESVRSRLKRE---QSLSFLEFN-YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGI 210
                   ++     + LS   F  Y +L A D + + K     +   G DQ  ++    
Sbjct: 106 ERNPTYKEMQENLTTKDLSTFGFLGYPVLMAAD-IIVYKAARVPV---GQDQIPHLELTR 161

Query: 211 DLGERLK-------TPKLFALT-SPLLTTASGTKMGKTLSGAIWLNK 249
           ++  R               LT +P +    G KM K+   AI+L+ 
Sbjct: 162 EIARRFNYLYGEVFPEPSALLTETPKVVGLDGRKMSKSYGNAIFLSD 208


>gi|13476819|ref|NP_108388.1| hypothetical protein mlr8253 [Mesorhizobium loti MAFF303099]
 gi|14027580|dbj|BAB53849.1| mlr8253 [Mesorhizobium loti MAFF303099]
          Length = 546

 Score = 43.7 bits (102), Expect = 0.055,   Method: Composition-based stats.
 Identities = 9/57 (15%), Positives = 23/57 (40%), Gaps = 1/57 (1%)

Query: 342 SKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
           ++     G  +   + +AG A S  +A   + +  +K+N   +++    +   D   
Sbjct: 90  AEATEEAGERIAKRLARAGLA-SRRDAEELIAAGRVKVNGRALTSPAFNVMPGDIIH 145


>gi|321468646|gb|EFX79630.1| hypothetical protein DAPPUDRAFT_304445 [Daphnia pulex]
          Length = 529

 Score = 43.7 bits (102), Expect = 0.056,   Method: Composition-based stats.
 Identities = 40/237 (16%), Positives = 71/237 (29%), Gaps = 25/237 (10%)

Query: 10  SILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
             L  R    ++    ++  + ++  +  Y G   T    H  +   +  +    K G +
Sbjct: 16  KHLITRNL-QEVLGEDKITEILAKRDLKLYWGTATTGKP-HVAYFLPMSKIGDFLKAGCE 73

Query: 70  PISLMGGGTSII---GDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
              L     + +     P      R       I+  +  +K      +K+  G       
Sbjct: 74  VTILFADLHAYLDNMKAPWELLALRTQYYEHAIKAMLISLKVPIDK-LKFVKGSEYQ--- 129

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSF--ESVRSRLKREQSLSFLEFNYMILQAYDF 184
                L     +D+ R + S  +         E V+   +    L      Y  LQA D 
Sbjct: 130 -----LTKQYTLDMYR-LSSLVTERDAKKAGAEVVK---QVGNPL-LSGLMYPGLQALDE 179

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
             L        Q GG DQ            +L   K   L +P++   +G KM  + 
Sbjct: 180 EYLK----VDAQFGGVDQRKIFTYADKYLPQLGYAKRAHLMNPMIPGLTGAKMSSSE 232


>gi|218532076|ref|YP_002422892.1| RNA-binding S4 domain protein [Methylobacterium chloromethanicum
           CM4]
 gi|218524379|gb|ACK84964.1| RNA-binding S4 domain protein [Methylobacterium chloromethanicum
           CM4]
          Length = 674

 Score = 43.7 bits (102), Expect = 0.056,   Method: Composition-based stats.
 Identities = 10/66 (15%), Positives = 26/66 (39%), Gaps = 1/66 (1%)

Query: 332 HSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
                P +   +     G  +   I +AG A S  +A   +++  + +N  ++++  + +
Sbjct: 4   IPDPSPAVPADQPAAPEGERIAKAIARAGIA-SRRDAEALIEAGRVTLNGKVLTSPAINV 62

Query: 392 KLQDFD 397
              D  
Sbjct: 63  TDSDRI 68


>gi|2851538|sp|P23612|SYWC_RABIT RecName: Full=Tryptophanyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Tryptophan--tRNA ligase; Short=TrpRS; Contains:
           RecName: Full=T1-TrpRS; Contains: RecName: Full=T2-TrpRS
          Length = 475

 Score = 43.7 bits (102), Expect = 0.056,   Method: Composition-based stats.
 Identities = 38/248 (15%), Positives = 80/248 (32%), Gaps = 31/248 (12%)

Query: 15  RGFIHQISN-PRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +  + LD   ++     Y G   ++ ++H GHL   +   WLQ     P+ +
Sbjct: 138 RGIFFSHRDMNQVLDAYENKKPFYLYTGRGPSSEAMHVGHLIPFIFTKWLQDVFDVPLVV 197

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                         D+ + + +   +++            I  G       + ++  ++ 
Sbjct: 198 -----------QMSDDEKYLWKDLTLEQVYGYTLENAKDIIACGFDVNKTFIFSDLDYMG 246

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA--------YDFV 185
                   + +     + + ++F  V+       S    + ++  +QA            
Sbjct: 247 --MSPGFYKNV---VKIQKHVTFNQVKGIFGFTDSDCIGKISFPAIQAAPSFSNSFPQIF 301

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTASGTKMGKTLS 242
               +  C +     DQ        D+  R+  PK   L +   P L  A  TKM  +  
Sbjct: 302 HGQADIQCLIPC-AIDQDPYFRMTRDVAPRIGYPKPALLHSTFFPALQGAQ-TKMSASDP 359

Query: 243 G-AIWLNK 249
             +I+L  
Sbjct: 360 NSSIFLTD 367


>gi|157964447|ref|YP_001499271.1| lysyl-tRNA synthetase [Rickettsia massiliae MTU5]
 gi|166980069|sp|A8F1D8|SYK_RICM5 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|157844223|gb|ABV84724.1| Lysyl-tRNA synthetase [Rickettsia massiliae MTU5]
          Length = 522

 Score = 43.7 bits (102), Expect = 0.057,   Method: Composition-based stats.
 Identities = 15/84 (17%), Positives = 26/84 (30%), Gaps = 6/84 (7%)

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            DF           +M G D   N     ++   L       L   L    +G K+ K+ 
Sbjct: 236 PDFGMRWAALKVDYEMYGKDHLANARLYSEICRILGGKPPVQLCYELFLDENGEKISKSK 295

Query: 242 SGAIWLNK-EMTSPYN-----FWQ 259
             +I ++     +P        +Q
Sbjct: 296 GNSISVDDWLKCAPVESMALFMYQ 319


>gi|226321166|ref|ZP_03796707.1| tryptophanyl-tRNA synthetase [Borrelia burgdorferi 29805]
 gi|226233458|gb|EEH32198.1| tryptophanyl-tRNA synthetase [Borrelia burgdorferi 29805]
          Length = 351

 Score = 43.7 bits (102), Expect = 0.057,   Method: Composition-based stats.
 Identities = 31/218 (14%), Positives = 68/218 (31%), Gaps = 28/218 (12%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRD-ESRRMMRSQEIQEN 102
            T + LH GH    ++     +  ++   ++    ++   P  +   +      + + + 
Sbjct: 12  PTGA-LHLGHYVGSVVNRLKFQEEYETYFIIADLHTLTTKPDLKSINTIPSNVREMVLDY 70

Query: 103 IEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR 162
           +          I   +   +   L+            ++  +     +  +         
Sbjct: 71  LACGINPDKVSIYLQSAIPELFELH--------LIFSMIVTVARLQRIPSIKDMSIAAG- 121

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT---- 218
             +E     L   Y +L + D +    N    L   G D   +I    +L  R       
Sbjct: 122 -LKEIPYGLL--GYPVLMSADILMTKAN----LVPVGRDNESHIEFTRELARRFNHLYKN 174

Query: 219 ------PKLFALTSPLLTTASGTKMGKTLSGAIWLNKE 250
                   +F  + PL+      KM K+L+ AI+LN +
Sbjct: 175 NFFPIPESVFTDSRPLVGIYGKNKMSKSLNNAIFLNDD 212


>gi|219129493|ref|XP_002184922.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217403707|gb|EEC43658.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 405

 Score = 43.7 bits (102), Expect = 0.058,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 21/53 (39%), Gaps = 1/53 (1%)

Query: 15  RGFIHQISNPREL-DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           RG      +   L   + +   +  Y G   ++ S+H GHL   +   WLQ  
Sbjct: 53  RGMFFSHRDLDTLLRQVEAGAPMYLYTGRGPSSQSMHLGHLIPFLFTKWLQDA 105


>gi|81427941|ref|YP_394940.1| tryptophanyl-tRNA synthetase II [Lactobacillus sakei subsp. sakei
           23K]
 gi|78609582|emb|CAI54628.1| Tryptophanyl--tRNA synthetase [Lactobacillus sakei subsp. sakei
           23K]
          Length = 338

 Score = 43.7 bits (102), Expect = 0.058,   Method: Composition-based stats.
 Identities = 43/241 (17%), Positives = 75/241 (31%), Gaps = 46/241 (19%)

Query: 44  LTASSLHAGHLTQ-LMLLFWLQKTGHKPISLMGGGTSIIGDPSF-RDESRRMMRSQEIQE 101
            T   LH GH    L     +Q +G     +M      I D     D +R     ++I+ 
Sbjct: 12  PTGK-LHIGHYIGSLRNRVAMQDSGEYETFIM------IADQQALTDNAR---DPEKIRN 61

Query: 102 NIEKIKGIFSSFIKY-----GTGKTDALMLNNETWLCSIKYIDLLREIG-SFFSVNRMLS 155
           ++      F   + Y        KT   + +    L  +  +  L  +  S    N  + 
Sbjct: 62  SL------FQVALDYLSVGIDPAKTTVFVQSQIPALSELT-MHYLNLVTVSRLQRNPTVK 114

Query: 156 FESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER 215
            E  +   ++     FL   Y + QA D           + +G  DQ   +    ++   
Sbjct: 115 AEIQQKNFEQSIPAGFL--IYPVSQAADITAFKA---TTVPVG-DDQEPMLEQTREIVRT 168

Query: 216 LKTPK-LFALTSP----------LLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
                    L  P           L    G  KM K+L  AI+L+ +        +   +
Sbjct: 169 FNNVYGQEILVEPEGVFPPKGEGRLPGLDGNAKMSKSLGNAIYLSDDA---ETLEKKVMS 225

Query: 264 I 264
           +
Sbjct: 226 M 226


>gi|302387646|ref|YP_003823468.1| pseudouridine synthase [Clostridium saccharolyticum WM1]
 gi|302198274|gb|ADL05845.1| pseudouridine synthase [Clostridium saccharolyticum WM1]
          Length = 262

 Score = 43.7 bits (102), Expect = 0.059,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 24/61 (39%), Gaps = 2/61 (3%)

Query: 348 RGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFG 407
            G+ L   + +AG   S  EA R +++  + IN    +  +  +  Q     G      G
Sbjct: 4   EGIRLNKFLSEAGIC-SRREADRFIEAGKVSINGKAAATGQKVLPGQSVTINGRTV-QAG 61

Query: 408 K 408
           K
Sbjct: 62  K 62


>gi|291539714|emb|CBL12825.1| tryptophanyl-tRNA synthetase [Roseburia intestinalis XB6B4]
          Length = 361

 Score = 43.7 bits (102), Expect = 0.059,   Method: Composition-based stats.
 Identities = 41/240 (17%), Positives = 72/240 (30%), Gaps = 43/240 (17%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     LQ +G +  I +M      I D            +     
Sbjct: 12  PTGK-LHVGHYVGSLKRRVELQNSGEYDKIFIM------IADAQA--------LTDNADN 56

Query: 102 NIEKIKGIFSSFIKY-----GTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSF 156
             +    I    + Y        K++  + +  T L  + +  +     S    N  +  
Sbjct: 57  PAKVRSNIMEVALDYLSVGIDPAKSNIFIQSYVTELTELTFYYMNLVTVSRLQRNPTVKS 116

Query: 157 ESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL 216
           E      +    + F  F Y I QA D           + +G  DQ   +    ++  + 
Sbjct: 117 EIQMRNFETSIPVGF--FCYPISQAADITAFHA---TTVPVG-EDQMPMLEQTKEIVHKF 170

Query: 217 KTPKLFALTSPL-----------LTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNI 264
                  LT P            L    G  KM K+L   I+L++      +  +   ++
Sbjct: 171 NAVYGETLTDPQILLPENKACLRLPGTDGKAKMSKSLGNCIYLSEPEA---DVKKKIMSM 227


>gi|110283011|sp|P17248|SYWC_BOVIN RecName: Full=Tryptophanyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Tryptophan--tRNA ligase; Short=TrpRS; Contains:
           RecName: Full=T1-TrpRS; Contains: RecName: Full=T2-TrpRS
 gi|74354933|gb|AAI02807.1| WARS protein [Bos taurus]
 gi|296475163|gb|DAA17278.1| tryptophanyl-tRNA synthetase, cytoplasmic [Bos taurus]
          Length = 476

 Score = 43.7 bits (102), Expect = 0.059,   Method: Composition-based stats.
 Identities = 39/248 (15%), Positives = 84/248 (33%), Gaps = 31/248 (12%)

Query: 15  RGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +  + LD   ++     Y G   ++ ++H GHL   +   WLQ   + P+ +
Sbjct: 139 RGIFFSHRDMHQILDAYENKKPFYLYTGRGPSSEAMHVGHLIPFIFTKWLQDVFNVPLVI 198

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                         D+ + + +   + +            I  G       + ++  ++ 
Sbjct: 199 -----------QMTDDEKYLWKDLTLDQAYGYAVENAKDIIACGFDINKTFIFSDLDYMG 247

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA-----YDFVELA 188
                   + +     + + ++F  V+       S    + ++  +QA       F ++ 
Sbjct: 248 --MSPGFYKNV---VKIQKHVTFNQVKGIFGFTDSDCIGKISFPAIQAAPSFSNSFPQIF 302

Query: 189 KNY---DCRLQMGGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTASGTKMGKTLS 242
           ++     C +     DQ        D+  R+  PK   L +   P L  A  TKM  +  
Sbjct: 303 RDRTDVQCLIPC-AIDQDPYFRMTRDVAPRIGYPKPALLHSTFFPALQGAQ-TKMSASDP 360

Query: 243 G-AIWLNK 249
             +I+L  
Sbjct: 361 NSSIFLTD 368


>gi|289191582|ref|YP_003457523.1| ribosomal protein S4 [Methanocaldococcus sp. FS406-22]
 gi|288938032|gb|ADC68787.1| ribosomal protein S4 [Methanocaldococcus sp. FS406-22]
          Length = 186

 Score = 43.7 bits (102), Expect = 0.059,   Method: Composition-based stats.
 Identities = 20/126 (15%), Positives = 47/126 (37%), Gaps = 9/126 (7%)

Query: 281 MSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS 340
             E+ +   +  K   +A+++I+          + A++A           I     PT+ 
Sbjct: 39  KREVWKAETILRKYRRQARRLISDRT------EQGAKEAVQLFNVLKKYGILKVENPTLD 92

Query: 341 ISKDEVSRGM---GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
                    +    L TL+ + G A +  +AR+ +    I +N  +++     + +++ D
Sbjct: 93  DVLSLTVEDILERRLQTLVFRKGLARTPRQARQLIVHGHIAVNGRVVTAPSYMVTVEEED 152

Query: 398 STGNIK 403
                K
Sbjct: 153 KISYAK 158


>gi|257414220|ref|ZP_04745631.2| tryptophan--tRNA ligase [Roseburia intestinalis L1-82]
 gi|257200809|gb|EEU99093.1| tryptophan--tRNA ligase [Roseburia intestinalis L1-82]
          Length = 368

 Score = 43.7 bits (102), Expect = 0.059,   Method: Composition-based stats.
 Identities = 42/240 (17%), Positives = 72/240 (30%), Gaps = 43/240 (17%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     LQ +G +  I +M      I D            +     
Sbjct: 19  PTGK-LHVGHYVGSLKRRVELQNSGEYDKIFIM------IADAQA--------LTDNADN 63

Query: 102 NIEKIKGIFSSFIKY-----GTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSF 156
             +    I    + Y        K+D  + +  T L  + +  +     S    N  +  
Sbjct: 64  PAKVRSNIMEVALDYLSVGIDPAKSDIFIQSYVTELTELTFYYMNLVTVSRLQRNPTVKS 123

Query: 157 ESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL 216
           E      +    + F  F Y I QA D           + +G  DQ   +    ++  + 
Sbjct: 124 EIQMRNFETSIPVGF--FCYPISQAADITAFHA---TTVPVG-EDQMPMLEQTKEIVHKF 177

Query: 217 KTPKLFALTSPL-----------LTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNI 264
                  LT P            L    G  KM K+L   I+L++      +  +   ++
Sbjct: 178 NAVYGETLTDPQILLPENKACLRLPGTDGKAKMSKSLGNCIYLSEPEA---DVKKKIMSM 234


>gi|224532574|ref|ZP_03673197.1| tryptophan--tRNA ligase [Borrelia burgdorferi WI91-23]
 gi|224512517|gb|EEF82895.1| tryptophan--tRNA ligase [Borrelia burgdorferi WI91-23]
 gi|312149318|gb|ADQ29389.1| tryptophanyl-tRNA synthetase [Borrelia burgdorferi N40]
          Length = 351

 Score = 43.7 bits (102), Expect = 0.059,   Method: Composition-based stats.
 Identities = 31/218 (14%), Positives = 68/218 (31%), Gaps = 28/218 (12%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRD-ESRRMMRSQEIQEN 102
            T + LH GH    ++     +  ++   ++    ++   P  +   +      + + + 
Sbjct: 12  PTGA-LHLGHYVGSVVNRLKFQEEYETYFIIADLHTLTTKPDLKSINTIPSNVREMVLDY 70

Query: 103 IEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR 162
           +          I   +   +   L+            ++  +     +  +         
Sbjct: 71  LACGINPDKVSIYLQSAIPELFELH--------LIFSMIVTVARLQRIPSIKDMSIAAG- 121

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT---- 218
             +E     L   Y +L + D +    N    L   G D   +I    +L  R       
Sbjct: 122 -LKEIPYGLL--GYPVLMSADILMTKAN----LVPVGRDNESHIEFTRELARRFNHLYKN 174

Query: 219 ------PKLFALTSPLLTTASGTKMGKTLSGAIWLNKE 250
                   +F  + PL+      KM K+L+ AI+LN +
Sbjct: 175 NFFPIPESVFTDSRPLVGIYGKNKMSKSLNNAIFLNDD 212


>gi|166713895|ref|ZP_02245102.1| tryptophanyl-tRNA synthetase [Xanthomonas oryzae pv. oryzicola
           BLS256]
          Length = 429

 Score = 43.7 bits (102), Expect = 0.059,   Method: Composition-based stats.
 Identities = 22/96 (22%), Positives = 35/96 (36%), Gaps = 18/96 (18%)

Query: 164 KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFA 223
             +  ++   F Y +L A D + + K +   +   G DQ  +I    D  +R     ++ 
Sbjct: 124 DEDAGVTAGLFMYPVLMAADIL-IFKAHKVPV---GRDQIQHIEMARDFAQRFN--HVYG 177

Query: 224 ---LTSP---------LLTTASGTKMGKTLSGAIWL 247
               T P          L    G KM K+ S  I L
Sbjct: 178 REFFTLPEGVIDEQVSTLPGLDGRKMSKSYSNTIPL 213


>gi|299141527|ref|ZP_07034663.1| ribosomal large subunit pseudouridine synthase B [Prevotella oris
           C735]
 gi|298576863|gb|EFI48733.1| ribosomal large subunit pseudouridine synthase B [Prevotella oris
           C735]
          Length = 490

 Score = 43.7 bits (102), Expect = 0.060,   Method: Composition-based stats.
 Identities = 11/71 (15%), Positives = 31/71 (43%), Gaps = 1/71 (1%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           + +  + L   +  AG   S  EA   + +  + +N ++++    ++   D     +  +
Sbjct: 250 DPNEPIRLNKYLANAGVC-SRREADEFISAGVVSVNGTVVTELGTKVLRSDEVKFHDQLV 308

Query: 405 SFGKKNHIICH 415
           S  KK +++ +
Sbjct: 309 SLEKKVYVLLN 319


>gi|296272088|ref|YP_003654719.1| tryptophanyl-tRNA synthetase [Arcobacter nitrofigilis DSM 7299]
 gi|296096263|gb|ADG92213.1| tryptophanyl-tRNA synthetase [Arcobacter nitrofigilis DSM 7299]
          Length = 320

 Score = 43.7 bits (102), Expect = 0.060,   Method: Composition-based stats.
 Identities = 40/294 (13%), Positives = 91/294 (30%), Gaps = 48/294 (16%)

Query: 41  GYDLTASSLHAGHLTQLML-LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           G   +   +H G+   ++  +   Q  G +  + +    +             +   +E 
Sbjct: 6   GIQPSGI-IHIGNYFGMIKKMIESQDDG-ELFAFIASYHA-------------LTTVKEK 50

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCS--IKYIDLLREIGSFFSVNRMLSFE 157
           +   + I  +  +F+  G     +       W+     + ++L   + +  S+  +    
Sbjct: 51  EVLEKNIFEVAVNFLALGMDPEKSTF-----WVQHHVKEVLELYWLLSNHTSMGLLERAH 105

Query: 158 SVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK 217
           S + ++ R    +   F+Y +L A D +     YD  +   G DQ  ++    D+     
Sbjct: 106 SYKDKVARGFQTNHGLFSYPVLMAADILV----YDSNIVPVGKDQIQHVEMTRDIANSFN 161

Query: 218 TP-KLFALTSP---------LLTTASGTKMGKTLSGAI-WLNKEMTSPYNFWQYW---RN 263
              K   L  P          +    G KM K+    I       T            + 
Sbjct: 162 NHYKTDILVLPEAKVDEVVATVPGTDGAKMSKSYGNTIDMFGDAKTIKKQVMGVVTDSKG 221

Query: 264 IDDAD------VVSFAKRL-TTLPMSEIDRMAKLQGKEINEAKKIIATEITTMV 310
           +DD        +   ++       ++E+ +     G+     K  +  +I    
Sbjct: 222 LDDVKDPTTCNIYKLSELFMNEEELAELRQRYATPGEGYGHFKMTLLDKINEHF 275


>gi|58336550|ref|YP_193135.1| tryptophanyl-tRNA synthetase II [Lactobacillus acidophilus NCFM]
 gi|227903101|ref|ZP_04020906.1| tryptophanyl-tRNA synthetase II [Lactobacillus acidophilus ATCC
           4796]
 gi|58253867|gb|AAV42104.1| trp-tRNA synthetase [Lactobacillus acidophilus NCFM]
 gi|227869087|gb|EEJ76508.1| tryptophanyl-tRNA synthetase II [Lactobacillus acidophilus ATCC
           4796]
          Length = 340

 Score = 43.7 bits (102), Expect = 0.060,   Method: Composition-based stats.
 Identities = 38/225 (16%), Positives = 67/225 (29%), Gaps = 37/225 (16%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     LQ +G + P  ++    ++  +    ++ R  +    +  
Sbjct: 12  PTGK-LHIGHYIGSLKNRVKLQNSGKYDPYIMIADTQALTDNARNPEKIRNSLIQVALDY 70

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
               I             K+   + +    L  +    +     +    N  +  E  + 
Sbjct: 71  LAVGI----------DPTKSTIYVQSQIPALFELTSYYMDLVSVARLERNPTVKTEIKQK 120

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKL 221
             K    + FL  NY + QA D       +   L   G DQ   +    ++         
Sbjct: 121 DFKDSIPVGFL--NYPVSQAADITA----FKATLIPVGDDQEPMLEQTREIVRTFNR--- 171

Query: 222 FALTSPL--------------LTTASGT-KMGKTLSGAIWLNKEM 251
              T  L              L    G  KM K+L  AI+L  + 
Sbjct: 172 VYNTDILVEPKGYFPPKGQGRLPGLDGNAKMSKSLGNAIYLADDA 216


>gi|108803126|ref|YP_643063.1| tryptophanyl-tRNA synthetase [Rubrobacter xylanophilus DSM 9941]
 gi|108764369|gb|ABG03251.1| tryptophanyl-tRNA synthetase [Rubrobacter xylanophilus DSM 9941]
          Length = 330

 Score = 43.7 bits (102), Expect = 0.060,   Method: Composition-based stats.
 Identities = 54/330 (16%), Positives = 105/330 (31%), Gaps = 53/330 (16%)

Query: 33  QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRR 92
                 + G   + + LH G+    +  +   +  ++    +    ++   P    E RR
Sbjct: 2   DQRQRVFSGIQPSGN-LHIGNYVGAIKNWVAIQERYENYFCIVDLHALT-VPQDPKELRR 59

Query: 93  MMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNR 152
            +R          +        +       A +    TWL        L  I  F  ++R
Sbjct: 60  KIREVAAIYLASGLDPQRCVIFRQSHVSAHAEL----TWL--------LNCIARFGELSR 107

Query: 153 MLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL 212
           M  F+  ++R +  +S S   F+Y +L A D +     Y+  L   G DQ  ++     L
Sbjct: 108 MTQFKD-KARKEGTESASVGLFDYPVLMASDILL----YNAHLVPVGDDQRQHLELTRTL 162

Query: 213 GERLKT--PKLFAL--TSPLLTTAS-------GTKMGKTLSGAIWLNKEMTSPYNFWQYW 261
             R      + F +     L T A          KM K+          +  P    +  
Sbjct: 163 ARRFNNLYGETFVVPEAMILKTGARVMALDAPNEKMSKSSPRPASYVAILDDPDTVRRKI 222

Query: 262 RN-IDDA--------------DVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           R  + D+              +++     +T   + E++   +  G+   E KK +A  +
Sbjct: 223 RRAVTDSGTEIVAREDKPAITNLLDIYAAITGKTVPELEEQYR--GRGYGEFKKDLAEVV 280

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHM 336
                  E        A+E  +     + +
Sbjct: 281 V------EALAPIRERALELLENPGELEEL 304


>gi|87122175|ref|ZP_01078058.1| tryptophanyl-tRNA synthetase [Marinomonas sp. MED121]
 gi|86162495|gb|EAQ63777.1| tryptophanyl-tRNA synthetase [Marinomonas sp. MED121]
          Length = 336

 Score = 43.7 bits (102), Expect = 0.060,   Method: Composition-based stats.
 Identities = 22/94 (23%), Positives = 35/94 (37%), Gaps = 14/94 (14%)

Query: 164 KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFA 223
             +  ++   F Y +L + D +    N   ++ +G  DQ  +I    D+  RL       
Sbjct: 125 DADLGITMGLFCYPVLMSADILAFNAN---KVPVG-RDQIQHIEMARDIAGRLNHLYGNQ 180

Query: 224 LTSP----------LLTTASGTKMGKTLSGAIWL 247
           L  P          LL    G KM K+ +  I L
Sbjct: 181 LVLPEAVVDDSETALLKGLDGRKMSKSYNNTIPL 214


>gi|29840716|ref|NP_829822.1| tryptophanyl-tRNA synthetase [Chlamydophila caviae GPIC]
 gi|33301680|sp|Q821H9|SYW_CHLCV RecName: Full=Tryptophanyl-tRNA synthetase; AltName:
           Full=Tryptophan--tRNA ligase; Short=TrpRS
 gi|29835066|gb|AAP05700.1| tryptophanyl-tRNA synthetase [Chlamydophila caviae GPIC]
          Length = 345

 Score = 43.7 bits (102), Expect = 0.061,   Method: Composition-based stats.
 Identities = 41/230 (17%), Positives = 79/230 (34%), Gaps = 37/230 (16%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTG--HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +      +    +    ++    ++         +R  +R +++ +
Sbjct: 13  PTGK-LHLGHWVGSIKNRLDLQNNPAYDCFFIIADLHTL--------TTR--VRKEQVVD 61

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLS----FE 157
               I  + + ++  G     + +         I  + LL       SVNR++      E
Sbjct: 62  VDNHIYEVLADWLSVGIDPNKSSIYLQSAIP-EIYELHLL--FSMLISVNRIMGIPSLKE 118

Query: 158 SVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK 217
             ++    E  LS     Y +LQ+ D + LAK     +   G D   +I    D+     
Sbjct: 119 MAKNASIEEGGLSLGLMGYPVLQSADIL-LAKAQLVPV---GKDNEAHIELTRDIARNFN 174

Query: 218 TPKLFALTSP----------LLTTASGT-KMGKTLSGAIWLNKEMTSPYN 256
              L+    P           L    G  KM K+ + AI+L+ +  +  +
Sbjct: 175 R--LYGEIFPEPETLQGELTSLVGIDGQGKMSKSANNAIYLSDDDATIED 222


>gi|116250744|ref|YP_766582.1| FtsJ cell division/haemolysin-like protein [Rhizobium leguminosarum
           bv. viciae 3841]
 gi|115255392|emb|CAK06467.1| putative FtsJ cell division/haemolysin-like protein [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 248

 Score = 43.7 bits (102), Expect = 0.061,   Method: Composition-based stats.
 Identities = 7/41 (17%), Positives = 16/41 (39%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
            L+V  G   S + AR  ++   ++I   +++         
Sbjct: 11  QLLVSLGLFASRSRARDAVQRGTVRIGGQVVTKAGALFSAD 51


>gi|297571264|ref|YP_003697038.1| RNA-binding S4 domain protein [Arcanobacterium haemolyticum DSM
           20595]
 gi|296931611|gb|ADH92419.1| RNA-binding S4 domain protein [Arcanobacterium haemolyticum DSM
           20595]
          Length = 75

 Score = 43.7 bits (102), Expect = 0.062,   Method: Composition-based stats.
 Identities = 11/61 (18%), Positives = 26/61 (42%)

Query: 341 ISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG 400
           I + +V   + L   +  AG   +  +AR  ++   +++NN I ++   ++   D     
Sbjct: 2   IEEFDVRLPIQLGQFVKLAGLTETGGQAREVIQEGWVRVNNEINTHRSAKLADGDVVDVR 61

Query: 401 N 401
            
Sbjct: 62  Y 62


>gi|340368|gb|AAA61298.1| transfer RNA-Trp synthetase [Homo sapiens]
          Length = 471

 Score = 43.7 bits (102), Expect = 0.062,   Method: Composition-based stats.
 Identities = 39/248 (15%), Positives = 84/248 (33%), Gaps = 31/248 (12%)

Query: 15  RGFIHQISN-PRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +  + LD   ++     Y G   ++ ++H GHL   +   WLQ   + P+ +
Sbjct: 134 RGIFFSHRDMNQVLDAYENKKPFYLYTGRGPSSEAMHVGHLIPFIFTKWLQDVFNVPLVI 193

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                         D+ + + +   + +            I  G       + ++  ++ 
Sbjct: 194 -----------QMTDDEKYLWKDLTLDQAYGDAVENAKDIIACGFDINKTFIFSDLDYMG 242

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA-----YDFVELA 188
                   + +     + + ++F  V+       S    + ++  +QA       F ++ 
Sbjct: 243 --MSSGFYKNV---VKIQKHVTFNQVKGIFGFTDSDCIGKISFPAIQAAPSFSNSFPQIF 297

Query: 189 K---NYDCRLQMGGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTASGTKMGKTLS 242
           +   +  C +     DQ        D+  R+  PK   L +   P L  A  TKM  +  
Sbjct: 298 RDRTDIQCLIPC-AIDQDPYFRMTRDVAPRIGYPKPALLHSTFFPALQGAQ-TKMSASDP 355

Query: 243 G-AIWLNK 249
             +I+L  
Sbjct: 356 NSSIFLTD 363


>gi|238922826|ref|YP_002936339.1| tryptophanyl-tRNA synthetase II [Eubacterium rectale ATCC 33656]
 gi|238874498|gb|ACR74205.1| tryptophanyl-tRNA synthetase II [Eubacterium rectale ATCC 33656]
 gi|291523728|emb|CBK89315.1| tryptophanyl-tRNA synthetase [Eubacterium rectale DSM 17629]
 gi|291528806|emb|CBK94392.1| tryptophanyl-tRNA synthetase [Eubacterium rectale M104/1]
          Length = 362

 Score = 43.7 bits (102), Expect = 0.062,   Method: Composition-based stats.
 Identities = 45/240 (18%), Positives = 79/240 (32%), Gaps = 43/240 (17%)

Query: 44  LTASSLHAGHLTQLMLLFW---LQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
            T   LH GH      L     LQ +G +  I +M      I D      +      ++I
Sbjct: 11  PTGR-LHIGHYVG--SLRRRVELQNSGEYDKIFIM------IADAQ--ALTDNFDNPEKI 59

Query: 100 QENI-EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNR-MLSFE 157
           ++NI E      S+ +     K+   + +    L  + +      + +   + R      
Sbjct: 60  RQNIIEVALDYLSAGLD--PAKSTLFVQSQIPELTELTF--FYSNLVTVSRLQRNPTVKN 115

Query: 158 SVRSR-LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL 216
            ++ R  +    + F  FNY I QA D           + +G  DQ   I    ++  + 
Sbjct: 116 EIKLRNFEASIPVGF--FNYPISQAADITAFKA---TTVPVG-EDQLPMIEQTREIVRKF 169

Query: 217 KTPKLFALTSP------------LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNI 264
            +     L  P            L  T  G KM K+L   I+L        +  +   ++
Sbjct: 170 NSIYDEVLVEPDVLLPENEACCRLPGTDGGQKMSKSLGNCIYLADTEA---DVKKKIMSM 226


>gi|314939887|ref|ZP_07847093.1| tryptophan--tRNA ligase [Enterococcus faecium TX0133a04]
 gi|314943734|ref|ZP_07850473.1| tryptophan--tRNA ligase [Enterococcus faecium TX0133C]
 gi|314949690|ref|ZP_07853008.1| tryptophan--tRNA ligase [Enterococcus faecium TX0082]
 gi|314953236|ref|ZP_07856175.1| tryptophan--tRNA ligase [Enterococcus faecium TX0133A]
 gi|314993684|ref|ZP_07859032.1| tryptophan--tRNA ligase [Enterococcus faecium TX0133B]
 gi|314997399|ref|ZP_07862350.1| tryptophan--tRNA ligase [Enterococcus faecium TX0133a01]
 gi|313588534|gb|EFR67379.1| tryptophan--tRNA ligase [Enterococcus faecium TX0133a01]
 gi|313591858|gb|EFR70703.1| tryptophan--tRNA ligase [Enterococcus faecium TX0133B]
 gi|313594702|gb|EFR73547.1| tryptophan--tRNA ligase [Enterococcus faecium TX0133A]
 gi|313597597|gb|EFR76442.1| tryptophan--tRNA ligase [Enterococcus faecium TX0133C]
 gi|313640850|gb|EFS05430.1| tryptophan--tRNA ligase [Enterococcus faecium TX0133a04]
 gi|313643948|gb|EFS08528.1| tryptophan--tRNA ligase [Enterococcus faecium TX0082]
          Length = 348

 Score = 43.7 bits (102), Expect = 0.063,   Method: Composition-based stats.
 Identities = 55/346 (15%), Positives = 101/346 (29%), Gaps = 61/346 (17%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
            T   LH GH    +      +        +     +I D      +      +++  N+
Sbjct: 23  PTGK-LHLGHYVGSLKTRVAMQADEDNQLFV-----MIADMQ--ALTDNAKNPEKVSSNV 74

Query: 104 EKIKGIFSSFIKY-----GTGKTDALMLNNETWLCSIKYIDL-LREIGSFFSVNRMLSFE 157
                     + Y        K+   + +    L  +    L L  +G     N  +  E
Sbjct: 75  ------LQVALDYLAVGLDPAKSTLFIQSQIPELAELTMYYLNLVSVGR-VRRNPTVKTE 127

Query: 158 SVRSRLKREQSLSFLEFNYMILQAYDFVELAKN--------YDCRLQMGGSDQWGNIICG 209
             + +        F  F Y + QA D      N             Q     Q  N   G
Sbjct: 128 IEQKKFGESVPTGF--FIYPVSQAADITAFKANLVPVGEDQKPMLEQTQEIVQSFNHTYG 185

Query: 210 IDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQ-YWRN---- 263
             L E         +    L    G  KM K+L   I+++     P +  Q    +    
Sbjct: 186 EVLVEPKGVFPPKGMGR--LPGIDGNGKMSKSLGNGIYISD----PADVLQKKVMSMYTD 239

Query: 264 -----------IDDADVVSFAKRL-TTLP-MSEIDRMAKLQGKEINEAKKIIAT----EI 306
                      ++   V ++     T    + E+    +  G    + K+ +      E 
Sbjct: 240 PNHIHVQDPGQVEGNMVFTYLDVFGTDKEAIEEMKAHYRRGGLGDVKIKRYLIDVLEAEF 299

Query: 307 TTMVHGREEAEKAATAAME-CFDMSIHSQHMPTISISKDEVSRGMG 351
             +   REE EK  +A ME     S  +  +   ++S+ + + G+ 
Sbjct: 300 APIRARREELEKDPSAVMEILRKGSEEAAKVAAQTLSEVKSAMGIN 345


>gi|253575746|ref|ZP_04853081.1| 30S ribosomal protein S4 [Paenibacillus sp. oral taxon 786 str.
           D14]
 gi|251844789|gb|EES72802.1| 30S ribosomal protein S4 [Paenibacillus sp. oral taxon 786 str.
           D14]
          Length = 199

 Score = 43.7 bits (102), Expect = 0.063,   Method: Composition-based stats.
 Identities = 16/82 (19%), Positives = 30/82 (36%), Gaps = 3/82 (3%)

Query: 320 ATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKI 379
                  F+    +QHMP I+     +     L  L+ + GFA S   AR+ +    + +
Sbjct: 64  EKQFRTLFEK---AQHMPGIAGETFMILLESRLDNLVYRLGFANSRAGARQLVSHGHVTV 120

Query: 380 NNSIISNEKLQIKLQDFDSTGN 401
           N   +     ++ + D      
Sbjct: 121 NGKKVDIASYRVNVGDVIGLRE 142


>gi|169840788|ref|ZP_02873901.1| hypothetical protein cdivTM_26801 [candidate division TM7
           single-cell isolate TM7a]
          Length = 40

 Score = 43.7 bits (102), Expect = 0.063,   Method: Composition-based stats.
 Identities = 9/37 (24%), Positives = 16/37 (43%), Gaps = 1/37 (2%)

Query: 373 KSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
           +   + I   +I + K     +DF   G + +  GKK
Sbjct: 1   EQGGVSIEGEVIKDVKKTFTKEDFAGEG-LLIKRGKK 36


>gi|150026278|ref|YP_001297104.1| tryptophan--tRNA ligase [Flavobacterium psychrophilum JIP02/86]
 gi|149772819|emb|CAL44303.1| Tryptophan--tRNA ligase [Flavobacterium psychrophilum JIP02/86]
          Length = 324

 Score = 43.7 bits (102), Expect = 0.063,   Method: Composition-based stats.
 Identities = 36/196 (18%), Positives = 64/196 (32%), Gaps = 30/196 (15%)

Query: 144 IGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQW 203
           +  FF   R+    S + +  R + ++   F Y +L A D +     YD  +   G DQ 
Sbjct: 95  LSCFFPFQRLTLAHSFKDKADRLEDVNAGLFTYPMLMAADILL----YDANVIPVGKDQL 150

Query: 204 GNIICGIDLGERLKTPKLFALTSP---------LLTTASGTKMGKTLSG--AIWLNKEMT 252
            ++    D   R           P         L+    G KM K+ +    I+LN +  
Sbjct: 151 QHVEITRDAASRFNHQMGETFVLPEAKIQEDIMLIPGIDGHKMSKSRNNIINIFLNDKAL 210

Query: 253 SPYNFWQYWRNIDDAD--------VVSFAKRLTTLPMSEIDRMAKLQGKEINE-----AK 299
                     +I   +        + +  K L      +I++M +       +     AK
Sbjct: 211 RKQVMSIETDSIPLEEAKNPETCNIFAIYKLLANES--QIEKMTENYKNANRDYGYGHAK 268

Query: 300 KIIATEITTMVHGREE 315
           + +   IT       E
Sbjct: 269 QALFELITEKFSTERE 284


>gi|42518284|ref|NP_964214.1| tryptophanyl-tRNA synthetase II [Lactobacillus johnsonii NCC 533]
 gi|227888946|ref|ZP_04006751.1| tryptophanyl-tRNA synthetase II [Lactobacillus johnsonii ATCC
           33200]
 gi|41582568|gb|AAS08180.1| tryptophanyl-tRNA synthetase [Lactobacillus johnsonii NCC 533]
 gi|227850534|gb|EEJ60620.1| tryptophanyl-tRNA synthetase II [Lactobacillus johnsonii ATCC
           33200]
 gi|329666594|gb|AEB92542.1| tryptophanyl-tRNA synthetase [Lactobacillus johnsonii DPC 6026]
          Length = 342

 Score = 43.7 bits (102), Expect = 0.064,   Method: Composition-based stats.
 Identities = 38/225 (16%), Positives = 73/225 (32%), Gaps = 37/225 (16%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     LQ  G + P  ++    ++       D +R     ++I+ 
Sbjct: 12  PTGK-LHIGHYIGSLKNRVKLQNEGKYDPYIMIADTQAL------TDNAR---DPEKIKN 61

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
           ++ ++  +    +     K+   + +    L  +    +     +    N  +  E  + 
Sbjct: 62  SLIQV-ALDYLAVGLDPEKSTIYVQSQIPALFELTAYYMDLVTVARLERNPTVKTEIKQK 120

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKL 221
             K    + FL  NY + QA D       +   +   G DQ   +    ++         
Sbjct: 121 NFKDSIPVGFL--NYPVSQAADITA----FKATIIPVGDDQEPMLEQTREIVRTFNR--- 171

Query: 222 FALTSPL--------------LTTASGT-KMGKTLSGAIWLNKEM 251
              T  L              L    G  KM K+L  AI+L+ + 
Sbjct: 172 VYNTDILVEPKGYFPPKGQGRLPGLDGNAKMSKSLGNAIYLSDDA 216


>gi|257884716|ref|ZP_05664369.1| tryptophanyl-tRNA synthetase [Enterococcus faecium 1,231,501]
 gi|257820554|gb|EEV47702.1| tryptophanyl-tRNA synthetase [Enterococcus faecium 1,231,501]
          Length = 336

 Score = 43.7 bits (102), Expect = 0.064,   Method: Composition-based stats.
 Identities = 55/346 (15%), Positives = 102/346 (29%), Gaps = 61/346 (17%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
            T   LH GH    +    + +        +     +I D      +      +++  N+
Sbjct: 11  PTGK-LHLGHYVGSLKTRVVMQADEDNQLFV-----MIADMQ--ALTDNAKNPEKVSSNV 62

Query: 104 EKIKGIFSSFIKY-----GTGKTDALMLNNETWLCSIKYIDL-LREIGSFFSVNRMLSFE 157
                     + Y        K+   + +    L  +    L L  +G     N  +  E
Sbjct: 63  ------LQVALDYLAVGLDPAKSTLFIQSQIPELAELTMYYLNLVSVGR-VRRNPTVKTE 115

Query: 158 SVRSRLKREQSLSFLEFNYMILQAYDFVELAKN--------YDCRLQMGGSDQWGNIICG 209
             + +        F  F Y + QA D      N             Q     Q  N   G
Sbjct: 116 IEQKKFGESVPTGF--FIYPVSQAADITAFKANLVPVGEDQKPMLEQTQEIVQSFNHTYG 173

Query: 210 IDLGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQ-YWRN---- 263
             L E         +    L    G  KM K+L   I+++     P +  Q    +    
Sbjct: 174 EVLVEPKGVFPPKGMGR--LPGIDGNGKMSKSLGNGIYISD----PADVLQKKVMSMYTD 227

Query: 264 -----------IDDADVVSFAKRL-TTLP-MSEIDRMAKLQGKEINEAKKIIAT----EI 306
                      ++   V ++     T    + E+    +  G    + K+ +      E 
Sbjct: 228 PNHIHVQDPGQVEGNMVFTYLDVFGTDKEAIEEMKAHYRRGGLGDVKIKRYLIDVLEAEF 287

Query: 307 TTMVHGREEAEKAATAAME-CFDMSIHSQHMPTISISKDEVSRGMG 351
             +   REE EK  +A ME     S  +  +   ++S+ + + G+ 
Sbjct: 288 APIRARREELEKDPSAVMEILRKGSEEAAKVAAQTLSEVKSAMGIN 333


>gi|170059894|ref|XP_001865561.1| conserved hypothetical protein [Culex quinquefasciatus]
 gi|167878506|gb|EDS41889.1| conserved hypothetical protein [Culex quinquefasciatus]
          Length = 372

 Score = 43.7 bits (102), Expect = 0.064,   Method: Composition-based stats.
 Identities = 39/263 (14%), Positives = 79/263 (30%), Gaps = 46/263 (17%)

Query: 35  VVTAYIGYDLTASSLHAGHLTQLMLLFW--LQKTGHKPISLMGGGTSIIGDPSFRDESRR 92
               + G   T + LH G+    +   W  LQ +G      +    S I  P   D    
Sbjct: 28  PRKIFSGVQPTGA-LHIGNYLGAIK-RWVDLQNSGEDVTYCIVDLHS-ITLPQDPD---- 80

Query: 93  MMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNR 152
            +      +    +             K+   + +       + +I     +G   ++ R
Sbjct: 81  -LLRHNSLQMAATLLACG-----IDPAKSTLFLQSGVPQHAELSWI-----LGCMTTMAR 129

Query: 153 MLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL 212
           +      + +  + + +    + Y +LQA D + L K     +   G DQ  ++     L
Sbjct: 130 LTHLPQYKEKSAKLKEIPLGLYIYPVLQAAD-IMLYKATHVPV---GEDQVQHLQLAQSL 185

Query: 213 GERLKT--PKLFALTSPLLTTASG----------TKMGKTL---SGAIWLNKEMTSPYNF 257
                      F   +P+++  +            KM K+       I L  +       
Sbjct: 186 ARAFNNRFGPTFPFCNPIISDDTSCRLKSLRDPTKKMSKSDPDPKSCIMLTDKADVIREK 245

Query: 258 WQYWRNIDDADVVSFAKRLTTLP 280
            +   ++ D     F   +T  P
Sbjct: 246 IRK--SVTD-----FTSEVTFEP 261


>gi|83859645|ref|ZP_00953165.1| lysyl-tRNA synthetase [Oceanicaulis alexandrii HTCC2633]
 gi|83852004|gb|EAP89858.1| lysyl-tRNA synthetase [Oceanicaulis alexandrii HTCC2633]
          Length = 531

 Score = 43.7 bits (102), Expect = 0.065,   Method: Composition-based stats.
 Identities = 19/160 (11%), Positives = 42/160 (26%), Gaps = 10/160 (6%)

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            DF           +M G D   N      +   L           L     G K+ K+ 
Sbjct: 238 PDFGMRWAALGVDFEMFGKDHQANAPIYSRICRILGVEPPVQYVYELFLDDQGEKISKSK 297

Query: 242 SGAI----WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE 297
              +    WL+       + + +          +  +    +    +D   +      ++
Sbjct: 298 GNGLSVEEWLSYAPQESLSMYMF------QKPRTAKRLYFDVIPKAVDEYRQHLRAYPDQ 351

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMP 337
           A+          +H  E  +  A  +       + + + P
Sbjct: 352 AEDKQLENPVYHIHDGEPPKAGADISYSLLLNLVSAANAP 391


>gi|333026652|ref|ZP_08454716.1| putative tryptophanyl-tRNA synthetase [Streptomyces sp. Tu6071]
 gi|332746504|gb|EGJ76945.1| putative tryptophanyl-tRNA synthetase [Streptomyces sp. Tu6071]
          Length = 330

 Score = 43.3 bits (101), Expect = 0.066,   Method: Composition-based stats.
 Identities = 49/296 (16%), Positives = 93/296 (31%), Gaps = 45/296 (15%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   +A S H G+    +  +   +  H    ++    + I  P   D  R   R    Q
Sbjct: 4   GIQPSAGSFHLGNYLGAVRQWVALQESHDAFYMVVDMHA-ITVPQDPDTLRANTRLSAAQ 62

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLS-FESV 159
                I    S+       +  A +     W        ++  +  F   +RM    +  
Sbjct: 63  LLAAGIDPERSALFVQSHVREHAELA----W--------IMNCLTGFGEASRMTQFKDKA 110

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT- 218
             +     ++    F Y +LQ  D + L + +   +   G DQ  ++    DL ER    
Sbjct: 111 AKQGAEGTTVGL--FTYPVLQVADIL-LYQAHQVPV---GEDQRQHVELTRDLAERFNAR 164

Query: 219 -------PKLFAL--TSPLLTTAS-GTKMGKTLSGAIWLNKEMTSPYNFWQYWRN-IDDA 267
                  P+ + L  T+ +        KM K+ +    L   M  P    +  ++ + D 
Sbjct: 165 YGETFVVPEAYILKETAKIYDLQEPSAKMSKSAASPKGLVNLMDEPKATAKKIKSAVTDT 224

Query: 268 D------------VVSFAKRLTTLPMSEIDRMAKL-QGKEINEAKKIIATEITTMV 310
           +            V +     + L    +  + +   GK     K  +A  +   V
Sbjct: 225 ETEIRFDRENKPGVSNLLGIYSNLTGVTVQALEEKYAGKGYGALKTDLAEVVVDFV 280


>gi|302786552|ref|XP_002975047.1| hypothetical protein SELMODRAFT_102976 [Selaginella moellendorffii]
 gi|300157206|gb|EFJ23832.1| hypothetical protein SELMODRAFT_102976 [Selaginella moellendorffii]
          Length = 395

 Score = 43.3 bits (101), Expect = 0.066,   Method: Composition-based stats.
 Identities = 39/242 (16%), Positives = 70/242 (28%), Gaps = 32/242 (13%)

Query: 15  RGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +  + LD          Y G   ++ +LH GHL   M   +LQ     P+ +
Sbjct: 54  RGVFFAHRDFEKVLDSYEKGEKFYLYTGRGPSSEALHLGHLIPFMFTKYLQDAFKVPLVI 113

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                      +   E  + +  +  ++ I     I  +FI             N     
Sbjct: 114 QLTDDEKCMWKNLSVEETKRLARENAKDIIACGFDISRTFIFSDFQYVGRGFYEN----- 168

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA-----YDFVELA 188
                          ++ + ++F  V+     +      +  +  +QA       F  L 
Sbjct: 169 -------------MITIAKSVTFNQVKGIFGFDGESHIGKIFFPAVQAAPSFPTSFPHLF 215

Query: 189 ---KNYDCRLQMGGSDQWGNIICGIDLGERLK-TPKLFALT--SPLLTTASGTKMGKTLS 242
                  C +     DQ        D+  RL         +   P L   SG KM  + +
Sbjct: 216 GTKSKIKCLIPC-AIDQDPYFRMTRDVAPRLGYQKPALIESRFFPALQGESG-KMSASDT 273

Query: 243 GA 244
            +
Sbjct: 274 NS 275


>gi|227495045|ref|ZP_03925361.1| tryptophan--tRNA ligase [Actinomyces coleocanis DSM 15436]
 gi|226831497|gb|EEH63880.1| tryptophan--tRNA ligase [Actinomyces coleocanis DSM 15436]
          Length = 368

 Score = 43.3 bits (101), Expect = 0.066,   Method: Composition-based stats.
 Identities = 40/238 (16%), Positives = 72/238 (30%), Gaps = 38/238 (15%)

Query: 26  ELDILCSQGVVTAYI--GYDLTASSLHAGHLTQ-LMLLFWLQKTGHKPISLMGGGTSIIG 82
           E+D    +      +  G   T   LH GH    +     LQ+ G +   L+        
Sbjct: 27  EIDRAIDEDPTHFRVLTGDRPTG-HLHLGHYFGTIRNRVLLQQRGVETWQLIADYQV--- 82

Query: 83  DPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC-SIKYIDLL 141
                     +     +    E++  + + +I  G     A++ N+      +   +  L
Sbjct: 83  ----------ITDRDGVGPLKERVFSLLTDYIAAGLDPEKAVIFNHSAVPALNQLMLPFL 132

Query: 142 REIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSD 201
             +              + +     +++S L   Y + QA D   L    +      G D
Sbjct: 133 SLVTESELHRNPTVKSELEA--TDGRAMSGLMLTYPVHQAAD--ILFCRANVV--PVGQD 186

Query: 202 QWGNIICGI--------DLGERLKTPKLF----ALTSP--LLTTASGTKMGKTLSGAI 245
           Q  ++              G   K   +F    AL S   L+    G KM K+    I
Sbjct: 187 QLPHLEQARLIANRFDKRYGRVHKDQPVFKRPEALLSEAMLVLGLDGQKMSKSRGNTI 244


>gi|169794952|ref|YP_001712745.1| tryptophanyl-tRNA synthetase II [Acinetobacter baumannii AYE]
 gi|184159270|ref|YP_001847609.1| tryptophanyl-tRNA synthetase II [Acinetobacter baumannii ACICU]
 gi|213157641|ref|YP_002320439.1| tryptophanyl-tRNA synthetase [Acinetobacter baumannii AB0057]
 gi|215482502|ref|YP_002324688.1| tryptophanyl-tRNA synthetase [Acinetobacter baumannii AB307-0294]
 gi|239502280|ref|ZP_04661590.1| tryptophanyl-tRNA synthetase II [Acinetobacter baumannii AB900]
 gi|260549010|ref|ZP_05823232.1| tryptophanyl-tRNA synthetase [Acinetobacter sp. RUH2624]
 gi|260557318|ref|ZP_05829534.1| tryptophanyl-tRNA synthetase [Acinetobacter baumannii ATCC 19606]
 gi|301344622|ref|ZP_07225363.1| tryptophanyl-tRNA synthetase II [Acinetobacter baumannii AB056]
 gi|301513052|ref|ZP_07238289.1| tryptophanyl-tRNA synthetase II [Acinetobacter baumannii AB058]
 gi|301597002|ref|ZP_07242010.1| tryptophanyl-tRNA synthetase II [Acinetobacter baumannii AB059]
 gi|332856253|ref|ZP_08436171.1| tryptophan--tRNA ligase [Acinetobacter baumannii 6013150]
 gi|332872531|ref|ZP_08440500.1| tryptophan--tRNA ligase [Acinetobacter baumannii 6014059]
 gi|169147879|emb|CAM85742.1| tryptophanyl-tRNA synthetase [Acinetobacter baumannii AYE]
 gi|183210864|gb|ACC58262.1| Tryptophanyl-tRNA synthetase [Acinetobacter baumannii ACICU]
 gi|193078186|gb|ABO13133.2| tryptophanyl-tRNA synthetase [Acinetobacter baumannii ATCC 17978]
 gi|213056801|gb|ACJ41703.1| tryptophanyl-tRNA synthetase [Acinetobacter baumannii AB0057]
 gi|213989051|gb|ACJ59350.1| tryptophanyl-tRNA synthetase [Acinetobacter baumannii AB307-0294]
 gi|260408178|gb|EEX01649.1| tryptophanyl-tRNA synthetase [Acinetobacter sp. RUH2624]
 gi|260409424|gb|EEX02726.1| tryptophanyl-tRNA synthetase [Acinetobacter baumannii ATCC 19606]
 gi|322509184|gb|ADX04638.1| trpS [Acinetobacter baumannii 1656-2]
 gi|323519212|gb|ADX93593.1| tryptophanyl-tRNA synthetase II [Acinetobacter baumannii
           TCDC-AB0715]
 gi|332727123|gb|EGJ58589.1| tryptophan--tRNA ligase [Acinetobacter baumannii 6013150]
 gi|332739217|gb|EGJ70075.1| tryptophan--tRNA ligase [Acinetobacter baumannii 6014059]
          Length = 337

 Score = 43.3 bits (101), Expect = 0.066,   Method: Composition-based stats.
 Identities = 46/261 (17%), Positives = 77/261 (29%), Gaps = 45/261 (17%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
            T   LH GH    +      +  H    L+    ++  +    D+ RR      I E  
Sbjct: 16  PTGQ-LHLGHFVGSLRSRVGLQDSHHQHLLLADAQALTDNADNPDKVRR-----NILEVA 69

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR- 162
                +          KT   + +    L  +  +  L  +              ++ R 
Sbjct: 70  LDYLAVG-----IDPTKTTICVQSCLPALNELTML-YLNFVTVARLERNPTIKSEIQMRG 123

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT---- 218
            +R+    FL   Y + QA D       +   +   G DQ   I    ++  R+      
Sbjct: 124 FERDIPAGFL--CYPVAQAADITA----FKATVVPVGEDQIPMIEQTNEIVRRVNRQIGQ 177

Query: 219 ---PKLFALTSPL--LTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSF 272
              P+  AL S +  L    G  KM K+L   I                 N  D D+   
Sbjct: 178 DLLPECKALLSNMARLPGFDGKAKMSKSLGNTI---------------VLNASDKDIKKA 222

Query: 273 AK-RLTTLPMSEIDRMAKLQG 292
                T      I+   +++G
Sbjct: 223 VNAMYTDPNHLRIEDPGQVEG 243


>gi|163853261|ref|YP_001641304.1| RNA-binding S4 domain-containing protein [Methylobacterium
           extorquens PA1]
 gi|163664866|gb|ABY32233.1| RNA-binding S4 domain protein [Methylobacterium extorquens PA1]
          Length = 669

 Score = 43.3 bits (101), Expect = 0.066,   Method: Composition-based stats.
 Identities = 10/66 (15%), Positives = 26/66 (39%), Gaps = 1/66 (1%)

Query: 332 HSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
                P +   +     G  +   I +AG A S  +A   +++  + +N  ++++  + +
Sbjct: 4   IPDPSPAVPADQPAAPEGERIAKAIARAGIA-SRRDAEALIEAGRVTLNGKVLTSPAINV 62

Query: 392 KLQDFD 397
              D  
Sbjct: 63  TDADRI 68


>gi|45187990|ref|NP_984213.1| ADR117Wp [Ashbya gossypii ATCC 10895]
 gi|44982807|gb|AAS52037.1| ADR117Wp [Ashbya gossypii ATCC 10895]
          Length = 426

 Score = 43.3 bits (101), Expect = 0.066,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 26/62 (41%), Gaps = 6/62 (9%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
            SER F       R LD+         Y G   ++ S+H GH+   +   WLQ+    PI
Sbjct: 81  FSERDF------GRILDLYEQGRPFFLYTGRGPSSDSMHLGHMVPFIFSKWLQEVFDVPI 134

Query: 72  SL 73
            +
Sbjct: 135 VI 136


>gi|299768994|ref|YP_003731020.1| tryptophanyl-tRNA synthetase II [Acinetobacter sp. DR1]
 gi|298699082|gb|ADI89647.1| tryptophanyl-tRNA synthetase II [Acinetobacter sp. DR1]
          Length = 337

 Score = 43.3 bits (101), Expect = 0.067,   Method: Composition-based stats.
 Identities = 46/261 (17%), Positives = 77/261 (29%), Gaps = 45/261 (17%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
            T   LH GH    +      +  H    L+    ++  +    D+ RR      I E  
Sbjct: 16  PTGQ-LHLGHFVGSLRSRVGLQDSHHQHLLLADAQALTDNADNPDKVRR-----NILEVA 69

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR- 162
                +          KT   + +    L  +  +  L  +              ++ R 
Sbjct: 70  LDYLAVG-----IDPTKTTICVQSCLPALNELTML-YLNFVTVARLERNPTIKSEIQMRG 123

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT---- 218
            +R+    FL   Y + QA D       +   +   G DQ   I    ++  R+      
Sbjct: 124 FERDIPAGFL--CYPVAQAADITA----FKATVVPVGEDQIPMIEQTNEIVRRVNRQIGQ 177

Query: 219 ---PKLFALTSPL--LTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSF 272
              P+  AL S +  L    G  KM K+L   I                 N  D D+   
Sbjct: 178 DLLPECKALLSNMARLPGFDGKAKMSKSLGNTI---------------VLNASDKDIKKA 222

Query: 273 AK-RLTTLPMSEIDRMAKLQG 292
                T      I+   +++G
Sbjct: 223 VNAMYTDPNHLRIEDPGQVEG 243


>gi|160890592|ref|ZP_02071595.1| hypothetical protein BACUNI_03037 [Bacteroides uniformis ATCC 8492]
 gi|156859591|gb|EDO53022.1| hypothetical protein BACUNI_03037 [Bacteroides uniformis ATCC 8492]
          Length = 242

 Score = 43.3 bits (101), Expect = 0.067,   Method: Composition-based stats.
 Identities = 12/71 (16%), Positives = 31/71 (43%), Gaps = 1/71 (1%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           + +  + L   +  AG   S  EA   + +  + +N  +++    +IK  D     +  +
Sbjct: 2   DPNEPIRLNKFLANAGVC-SRREADEFITAGVVSVNGEVVTELGTKIKRGDEVKFHDQTV 60

Query: 405 SFGKKNHIICH 415
           S  +K +++ +
Sbjct: 61  SIERKIYVLLN 71


>gi|119871968|ref|YP_929975.1| tryptophanyl-tRNA synthetase [Pyrobaculum islandicum DSM 4184]
 gi|119673376|gb|ABL87632.1| tryptophanyl-tRNA synthetase [Pyrobaculum islandicum DSM 4184]
          Length = 379

 Score = 43.3 bits (101), Expect = 0.067,   Method: Composition-based stats.
 Identities = 17/81 (20%), Positives = 29/81 (35%), Gaps = 3/81 (3%)

Query: 12  LSERGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWL-QKTGHK 69
           L +RGF +   +   +     +G     Y G   +   +H GH+   +LL W   K   +
Sbjct: 53  LIKRGFFYAHRDFDTILKWHGEGKPWALYTGRGPSGP-VHIGHMVPWILLKWFSDKFNLE 111

Query: 70  PISLMGGGTSIIGDPSFRDES 90
               M        DP  + + 
Sbjct: 112 VYFQMTDDEKFYDDPEMKLDE 132


>gi|90021873|ref|YP_527700.1| tryptophanyl-tRNA synthetase [Saccharophagus degradans 2-40]
 gi|89951473|gb|ABD81488.1| tryptophanyl-tRNA synthetase [Saccharophagus degradans 2-40]
          Length = 334

 Score = 43.3 bits (101), Expect = 0.067,   Method: Composition-based stats.
 Identities = 38/212 (17%), Positives = 68/212 (32%), Gaps = 47/212 (22%)

Query: 156 FESVRSRLKREQ----SLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGID 211
             +V   L+  +    +++   ++Y +L A D +    ++   + +G  DQ  ++    D
Sbjct: 113 KAAVAQNLENGEDPDFAVTMGLYSYPVLMAADILMFNASH---VPVG-KDQIQHVEMARD 168

Query: 212 LGERLKTPKLFALTSP---------LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWR 262
           +  R         T P         +L    G KM K+ +  I L      P    +   
Sbjct: 169 IAGRFNHHFDSLFTLPEAVVEDSVAVLQGLDGRKMSKSYNNTIPL----FLPEKQLKKHI 224

Query: 263 NI--------------DDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITT 308
           N               DD+ V    K   T   +E  R     G    EAKK +      
Sbjct: 225 NKIKTNLLEPGEPKDPDDSTVFQIWKAFATPEQTEAMRKEFENGIAWGEAKKQL----FE 280

Query: 309 MVHGREEAEKAATAAMECFDMSIHSQHMPTIS 340
           +V+G          +      +   + +P I 
Sbjct: 281 LVNGE--------VSEAREKYNALLEDVPAIE 304


>gi|188993504|ref|YP_001905514.1| tryptophanyl-tRNA synthetase [Xanthomonas campestris pv. campestris
           str. B100]
 gi|167735264|emb|CAP53478.1| unnamed protein product [Xanthomonas campestris pv. campestris]
          Length = 431

 Score = 43.3 bits (101), Expect = 0.068,   Method: Composition-based stats.
 Identities = 19/94 (20%), Positives = 30/94 (31%), Gaps = 14/94 (14%)

Query: 164 KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL-GERLKTPKLF 222
             +  ++   F Y +L A D + +   +   +   G DQ  +I    D            
Sbjct: 126 DEDAGVTAGLFMYPVLMAADIL-IFNAHKVPV---GRDQIQHIEMARDFAQRFNHVYGQD 181

Query: 223 ALTSP---------LLTTASGTKMGKTLSGAIWL 247
             T P          L    G KM K+ +  I L
Sbjct: 182 YFTLPDAVIDEQVATLPGLDGRKMSKSYNNTIPL 215


>gi|317475710|ref|ZP_07934970.1| S4 domain-containing protein [Bacteroides eggerthii 1_2_48FAA]
 gi|316908166|gb|EFV29860.1| S4 domain-containing protein [Bacteroides eggerthii 1_2_48FAA]
          Length = 331

 Score = 43.3 bits (101), Expect = 0.069,   Method: Composition-based stats.
 Identities = 12/71 (16%), Positives = 31/71 (43%), Gaps = 1/71 (1%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           + +  + L   +  AG   S  EA   + +  + +N  +++    +IK  D     +  +
Sbjct: 91  DPNEPIRLNKFLANAGVC-SRREADEFITAGVVSVNGEVVTELGTKIKRGDEVKFHDQAV 149

Query: 405 SFGKKNHIICH 415
           S  +K +++ +
Sbjct: 150 SIERKIYVLLN 160


>gi|315103776|gb|EFT75752.1| ribosomal RNA large subunit methyltransferase J [Propionibacterium
           acnes HL050PA2]
          Length = 263

 Score = 43.3 bits (101), Expect = 0.069,   Method: Composition-based stats.
 Identities = 11/59 (18%), Positives = 28/59 (47%), Gaps = 1/59 (1%)

Query: 349 GMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD-FDSTGNIKLSF 406
            + L   +V+AG A S   A R ++   + +N ++++   +++   D   +   + +S 
Sbjct: 18  PVRLDQALVEAGLARSRTLATRLVREGRVTVNRAVVTKPAMKVSTTDVLVADEEVWVSR 76


>gi|56416291|ref|YP_153366.1| tryptophanyl-tRNA synthetase II [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. ATCC 9150]
 gi|197365215|ref|YP_002144852.1| tryptophanyl-tRNA synthetase II [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. AKU_12601]
 gi|56130548|gb|AAV80054.1| trpS-like protein [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. ATCC 9150]
 gi|197096692|emb|CAR62314.1| trpS-like protein [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. AKU_12601]
          Length = 337

 Score = 43.3 bits (101), Expect = 0.069,   Method: Composition-based stats.
 Identities = 35/217 (16%), Positives = 63/217 (29%), Gaps = 29/217 (13%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMR-SQEIQEN 102
            T  SLH GH    +      +  H+   L+     +       D      +    I + 
Sbjct: 13  PTG-SLHLGHYVGSLRQHVALQQDHQQYVLIADLQGL------TDNGSNPQKIRDNIPQV 65

Query: 103 IEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR 162
           +     +           T   + +    L  +  + +     +    N  +  E  +  
Sbjct: 66  LADYLAVG-----IDPALTTICLQSALPALAELTVLYMNIVTVARVERNPTVKNEIAQKG 120

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT---- 218
             R   + F    Y I QA D       +   +   G DQ   I    ++  ++ +    
Sbjct: 121 FTRSLPVGF--MAYPISQAADITA----FKAEMVPVGDDQLPMIEQTNEIVHKMNSLFSS 174

Query: 219 ---PKLFALTSPL--LTTASG-TKMGKTLSGAIWLNK 249
                  AL S    L    G  KM K+L   + L+ 
Sbjct: 175 PVLRPCQALLSDTGRLPGIDGSAKMSKSLGNTLLLSA 211


>gi|42543730|pdb|1ULH|A Chain A, A Short Peptide Insertion Crucial For Angiostatic Activity
           Of Human Tryptophanyl-Trna Synthetase
 gi|42543731|pdb|1ULH|B Chain B, A Short Peptide Insertion Crucial For Angiostatic Activity
           Of Human Tryptophanyl-Trna Synthetase
          Length = 390

 Score = 43.3 bits (101), Expect = 0.069,   Method: Composition-based stats.
 Identities = 39/248 (15%), Positives = 84/248 (33%), Gaps = 31/248 (12%)

Query: 15  RGFIHQISN-PRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +  + LD   ++     Y G   ++ ++H GHL   +   WLQ   + P+ +
Sbjct: 53  RGIFFSHRDMNQVLDAYENKKPFYLYTGRGPSSEAMHVGHLIPFIFTKWLQDVFNVPLVI 112

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                         D+ + + +   + +            I  G       + ++  ++ 
Sbjct: 113 -----------QMTDDEKYLWKDLTLDQAYSYAVENAKDIIACGFDINKTFIFSDLDYMG 161

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA-----YDFVELA 188
                   + +     + + ++F  V+       S    + ++  +QA       F ++ 
Sbjct: 162 --MSSGFYKNV---VKIQKHVTFNQVKGIFGFTDSDCIGKISFPAIQAAPSFSNSFPQIF 216

Query: 189 K---NYDCRLQMGGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTASGTKMGKTLS 242
           +   +  C +     DQ        D+  R+  PK   L +   P L  A  TKM  +  
Sbjct: 217 RDRTDIQCLIPC-AIDQDPYFRMTRDVAPRIGYPKPALLHSTFFPALQGAQ-TKMSASDP 274

Query: 243 G-AIWLNK 249
             +I+L  
Sbjct: 275 NSSIFLTD 282


>gi|293610891|ref|ZP_06693190.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292826543|gb|EFF84909.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|325123207|gb|ADY82730.1| tryptophanyl-tRNA synthetase [Acinetobacter calcoaceticus PHEA-2]
          Length = 337

 Score = 43.3 bits (101), Expect = 0.069,   Method: Composition-based stats.
 Identities = 46/261 (17%), Positives = 77/261 (29%), Gaps = 45/261 (17%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
            T   LH GH    +      +  H    L+    ++  +    D+ RR      I E  
Sbjct: 16  PTGQ-LHLGHFVGSLRSRVGLQDSHHQHLLLADAQALTDNADNPDKVRR-----NILEVA 69

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR- 162
                +          KT   + +    L  +  +  L  +              ++ R 
Sbjct: 70  LDYLAVG-----IDPTKTTICVQSCLPALNELTML-YLNFVTVARLERNPTIKSEIQMRG 123

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT---- 218
            +R+    FL   Y + QA D       +   +   G DQ   I    ++  R+      
Sbjct: 124 FERDIPAGFL--CYPVAQAADITA----FKATVVPVGEDQIPMIEQTNEIVRRVNRQIGQ 177

Query: 219 ---PKLFALTSPL--LTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSF 272
              P+  AL S +  L    G  KM K+L   I                 N  D D+   
Sbjct: 178 DLLPECKALLSNMARLPGFDGKAKMSKSLGNTI---------------VLNASDKDIKKA 222

Query: 273 AK-RLTTLPMSEIDRMAKLQG 292
                T      I+   +++G
Sbjct: 223 VNAMYTDPNHLRIEDPGQVEG 243


>gi|291451731|ref|ZP_06591121.1| tryptophanyl-tRNA synthetase 2 [Streptomyces albus J1074]
 gi|291354680|gb|EFE81582.1| tryptophanyl-tRNA synthetase 2 [Streptomyces albus J1074]
          Length = 337

 Score = 43.3 bits (101), Expect = 0.069,   Method: Composition-based stats.
 Identities = 51/335 (15%), Positives = 99/335 (29%), Gaps = 55/335 (16%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   TA S H G+    +  +   +  H    ++    + I  P    E R         
Sbjct: 11  GIQPTAGSFHLGNYLGAVRQWVALQETHDAFYMVVDLHA-ITVPQDPAELR--------- 60

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLS-FESV 159
               ++             +    + +       + +  ++  +  F   +RM    +  
Sbjct: 61  -ANTRLAAAQLLAAGLDPERCTLFVQSQVPEHAQLGW--VMNCLTGFGEASRMTQFKDKS 117

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT- 218
             +     ++    F Y +L   D + L +     +   G DQ  ++     L ER    
Sbjct: 118 AKQGNDRTTVGL--FTYPMLMVADIL-LYQADQVPV---GEDQRQHLELTRTLAERFNGT 171

Query: 219 -------PKLFAL--TSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRN-IDD- 266
                  P  + L  T+ +      T KM K+ +    L   +  P    +  ++ + D 
Sbjct: 172 YGETFTVPGAYILKETAKIYDLQDPTAKMSKSAANPKGLINLLDEPKATMKKIKSAVTDT 231

Query: 267 -----------ADVVSFAKRLTTLPMSEIDRMAKL-QGKEINEAKKIIAT---------- 304
                      A V +    L+TL    I  + +   GK     K  +A           
Sbjct: 232 GSEIRFDRAEKAGVSNLLSILSTLSGVTIAELEEKYTGKGYGALKTDLAEVMVDFVTPFR 291

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI 339
           E T       E   A  AA      ++ ++ +   
Sbjct: 292 ERTQAYLDDPETLDAILAAGAEKARAVAAETLAQT 326


>gi|126732069|ref|ZP_01747871.1| RNA pseudouridylate synthase family protein [Sagittula stellata
           E-37]
 gi|126707358|gb|EBA06422.1| RNA pseudouridylate synthase family protein [Sagittula stellata
           E-37]
          Length = 341

 Score = 43.3 bits (101), Expect = 0.069,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 23/51 (45%), Gaps = 1/51 (1%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
             G  +  +I +AG   S  EA R +    + +N ++I +  L +  +D  
Sbjct: 6   PPGDRIAKVIARAG-RASRREAERMIAEGRVAVNGTVIDSPALNVTDKDRI 55


>gi|319649970|ref|ZP_08004120.1| tryptophanyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2]
 gi|317398408|gb|EFV79096.1| tryptophanyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2]
          Length = 329

 Score = 43.3 bits (101), Expect = 0.070,   Method: Composition-based stats.
 Identities = 51/317 (16%), Positives = 104/317 (32%), Gaps = 50/317 (15%)

Query: 37  TAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRS 96
           T + G   + + +  G+    M  F   +  +     +    + I  P  R E R+ +RS
Sbjct: 3   TIFSGIQPSGT-ITLGNYIGAMKQFVELQNDYNCYFCIVDQHA-ITVPQDRLELRKNIRS 60

Query: 97  QEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSF 156
                    I    S+          A       W+  ++ +  + E+       RM   
Sbjct: 61  LAALYLAVGIDPEKSTLFIQSEVPAHAQ----AGWM--MQCVSYIGEL------ERMTQ- 107

Query: 157 ESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL 216
              + + + + ++S     Y  L A D +     Y+  L   G DQ  ++    DL ER 
Sbjct: 108 --FKDKSEGKDAVSAGLLTYPPLMAADILL----YNTDLVPVGEDQKQHLELTRDLAERF 161

Query: 217 KTPKLFALTSPLLTTASG-----------TKMGKTLSGAIWLNKEMTSPYNFWQYWRN-I 264
                   T P +  A              KM K+          +  P    +  ++ +
Sbjct: 162 NKKYNDIFTIPDVRIAKAGARVMSLQDPLKKMSKSDPNKKSFISLLDDPKQIEKKIKSAV 221

Query: 265 DDAD---------------VVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTM 309
            D++               ++S    LT   ++EI++  + +GK   + K  ++  +   
Sbjct: 222 TDSEGIVKYDKENKPGVSNLLSIYSILTGKTVAEIEK--EYEGKGYGDFKAGLSDVVVGA 279

Query: 310 VHGREEAEKAATAAMEC 326
           +   ++   A   + E 
Sbjct: 280 IKPIQDKYYALMESEEL 296


>gi|21233346|ref|NP_639263.1| tryptophanyl-tRNA synthetase [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|25009424|sp|Q8P3Z4|SYW_XANCP RecName: Full=Tryptophanyl-tRNA synthetase; AltName:
           Full=Tryptophan--tRNA ligase; Short=TrpRS
 gi|21115180|gb|AAM43145.1| tryptophanyl-tRNA synthetase [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
          Length = 431

 Score = 43.3 bits (101), Expect = 0.070,   Method: Composition-based stats.
 Identities = 19/94 (20%), Positives = 30/94 (31%), Gaps = 14/94 (14%)

Query: 164 KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL-GERLKTPKLF 222
             +  ++   F Y +L A D + +   +   +   G DQ  +I    D            
Sbjct: 126 DEDAGVTAGLFMYPVLMAADIL-IFNAHKVPV---GRDQIQHIEMARDFAQRFNHVYGQD 181

Query: 223 ALTSP---------LLTTASGTKMGKTLSGAIWL 247
             T P          L    G KM K+ +  I L
Sbjct: 182 YFTLPDAVIDEQVATLPGLDGRKMSKSYNNTIPL 215


>gi|254563182|ref|YP_003070277.1| hypothetical protein METDI4845 [Methylobacterium extorquens DM4]
 gi|254270460|emb|CAX26460.1| conserved hypothetical protein; putative pseudouridine
           synthase-like domain [Methylobacterium extorquens DM4]
          Length = 669

 Score = 43.3 bits (101), Expect = 0.071,   Method: Composition-based stats.
 Identities = 10/66 (15%), Positives = 26/66 (39%), Gaps = 1/66 (1%)

Query: 332 HSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
                P +   +     G  +   I +AG A S  +A   +++  + +N  ++++  + +
Sbjct: 4   IPDPSPAVPADQPATPEGERIAKAIARAGIA-SRRDAEALIEAGRVTLNGKVLTSPAINV 62

Query: 392 KLQDFD 397
              D  
Sbjct: 63  TDSDRI 68


>gi|238852843|ref|ZP_04643248.1| tryptophan-tRNA ligase [Lactobacillus gasseri 202-4]
 gi|282852542|ref|ZP_06261884.1| tryptophan--tRNA ligase [Lactobacillus gasseri 224-1]
 gi|238834537|gb|EEQ26769.1| tryptophan-tRNA ligase [Lactobacillus gasseri 202-4]
 gi|282556284|gb|EFB61904.1| tryptophan--tRNA ligase [Lactobacillus gasseri 224-1]
          Length = 342

 Score = 43.3 bits (101), Expect = 0.071,   Method: Composition-based stats.
 Identities = 38/225 (16%), Positives = 74/225 (32%), Gaps = 37/225 (16%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     LQ  G ++P  ++    ++       D +R     ++I+ 
Sbjct: 12  PTGK-LHIGHYIGSLKNRVKLQNEGKYEPYIMIADTQAL------TDNAR---DPEKIKN 61

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
           ++ ++  +    +     K+   + +    L  +    +     +    N  +  E  + 
Sbjct: 62  SLIQV-ALDYLAVGLDPEKSTIYVQSQIPALFELTAYYMDLVTVARLERNPTVKTEIKQK 120

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKL 221
             K    + FL  NY + QA D       +   +   G DQ   +    ++         
Sbjct: 121 NFKDSIPVGFL--NYPVSQAADITA----FKATVVPVGDDQEPMLEQTREIVRTFNR--- 171

Query: 222 FALTSPL--------------LTTASGT-KMGKTLSGAIWLNKEM 251
              T  L              L    G  KM K+L  AI+L+ + 
Sbjct: 172 VYNTDILVEPKGYFPPKGQGRLPGLDGNAKMSKSLGNAIYLSDDA 216


>gi|171742791|ref|ZP_02918598.1| hypothetical protein BIFDEN_01905 [Bifidobacterium dentium ATCC
           27678]
 gi|171278405|gb|EDT46066.1| hypothetical protein BIFDEN_01905 [Bifidobacterium dentium ATCC
           27678]
          Length = 252

 Score = 43.3 bits (101), Expect = 0.071,   Method: Composition-based stats.
 Identities = 10/55 (18%), Positives = 26/55 (47%), Gaps = 2/55 (3%)

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDST--GNIKLSFG 407
            ++  G + S ++A+R +    + +N  ++S    ++   D  +   G+  +S G
Sbjct: 15  ALLDRGLSDSRSKAQRLIVQGKVSVNGVVVSKASAKVSDDDVIAADRGDDYVSRG 69


>gi|63102455|gb|AAH95453.1| WARS protein [Homo sapiens]
          Length = 471

 Score = 43.3 bits (101), Expect = 0.071,   Method: Composition-based stats.
 Identities = 14/60 (23%), Positives = 26/60 (43%), Gaps = 1/60 (1%)

Query: 15  RGFIHQISN-PRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +  + LD   ++     Y G   ++ ++H GHL   +   WLQ   + P+ +
Sbjct: 134 RGIFFSHRDMNQVLDAYENKKPFYLYTGRGPSSEAMHVGHLIPFIFTKWLQDVFNVPLVI 193


>gi|320159519|ref|YP_004172743.1| tryptophanyl-tRNA synthetase [Anaerolinea thermophila UNI-1]
 gi|319993372|dbj|BAJ62143.1| tryptophanyl-tRNA synthetase [Anaerolinea thermophila UNI-1]
          Length = 328

 Score = 43.3 bits (101), Expect = 0.072,   Method: Composition-based stats.
 Identities = 33/237 (13%), Positives = 68/237 (28%), Gaps = 32/237 (13%)

Query: 33  QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRR 92
                 + G   T    H G+    M  +   +  +  I  +    ++    + RD   +
Sbjct: 2   SKKGRVFSGARPTGRQ-HLGNYLGAMKNYVALQKDYDCIYCIVDLHALTTLETTRDL--K 58

Query: 93  MMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNR 152
               +   + +        S +   +       L+          + ++  +G    +  
Sbjct: 59  QNTFEMALDWLAAGIDPRESIVFIQSHVPQVTELS--------LILSMVSPLGKLTDLPT 110

Query: 153 MLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL 212
                    R++    ++    +Y +L   D V     Y+  +   G DQ  +I    + 
Sbjct: 111 FKEK----VRMQPNN-VNLGLVSYPVLMTADIVL----YETDIVPVGIDQASHIEFARET 161

Query: 213 GERLK--------TPKLFALT-SPLLTTASGT-KMGKTLSGAI--WLNKEMTSPYNF 257
                              LT  P +    G  KM K+L+  I   L  E T+    
Sbjct: 162 VRSFHYRYNTTVLKEPEIKLTEVPKVLGTDGQQKMSKSLNNHIELALTPEETTKVVM 218


>gi|219685970|ref|ZP_03540761.1| tryptophan--tRNA ligase [Borrelia garinii Far04]
 gi|219672487|gb|EED29535.1| tryptophan--tRNA ligase [Borrelia garinii Far04]
          Length = 350

 Score = 43.3 bits (101), Expect = 0.072,   Method: Composition-based stats.
 Identities = 31/230 (13%), Positives = 68/230 (29%), Gaps = 30/230 (13%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRD-ESRRMMRSQEIQEN 102
            T + LH GH    ++     +  ++   ++    ++   P  +   +      + + + 
Sbjct: 12  PTGA-LHLGHYVGSVVNRLKFQEKYETYFIIADLHTLTTKPDLKSINTIPFNVREMVLDY 70

Query: 103 IEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR 162
           +          I   +   +   L             ++  +     +  +         
Sbjct: 71  LACGINPNKVSIYLQSAIPELFELY--------LIFSMIVTVARLQRIPSIKDMSIAAG- 121

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK----- 217
             +E     L   Y +L + D +    N    L   G D   +I    +L  R       
Sbjct: 122 -LKEIPYGLL--GYPVLMSADILMAKAN----LVPVGRDNESHIEFARELARRFNYLYEN 174

Query: 218 -----TPKLFALTSPLLTTASGTKMGKTLSGAIWL--NKEMTSPYNFWQY 260
                   +F  + PL+      KM K+L  AI+L  ++ +        Y
Sbjct: 175 NFFPIPESIFTDSRPLVGICGKNKMSKSLDNAIFLKDDENLLEKKIMSMY 224


>gi|322379205|ref|ZP_08053596.1| tryptophanyl-tRNA synthetase [Helicobacter suis HS1]
 gi|322379723|ref|ZP_08054036.1| tryptophanyl-tRNA synthetase [Helicobacter suis HS5]
 gi|321147872|gb|EFX42459.1| tryptophanyl-tRNA synthetase [Helicobacter suis HS5]
 gi|321148345|gb|EFX42854.1| tryptophanyl-tRNA synthetase [Helicobacter suis HS1]
          Length = 331

 Score = 43.3 bits (101), Expect = 0.072,   Method: Composition-based stats.
 Identities = 50/297 (16%), Positives = 94/297 (31%), Gaps = 55/297 (18%)

Query: 37  TAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRS 96
             + G   T   +H G+    +   W++             +  I  P      R+    
Sbjct: 9   RVFSGIQPTGG-MHLGNYLGAIK-HWVEMQDRYESIFCIVNSHAITLPQDPQILRKQTLE 66

Query: 97  QEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSF 156
                    I    SS       +    +    TWL        L  I S   ++RM   
Sbjct: 67  MASMLLACGINPDKSSLFIQSQIEEHGAL----TWL--------LDCIASMGELSRMTQ- 113

Query: 157 ESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL 216
              + +  +E+++    FNY +L A D + L +     +   G+DQ  ++    +L  + 
Sbjct: 114 --FKDKSAKEENIGVGLFNYPVLMAADIL-LYQTDAVPV---GADQKQHLELARNLAIKF 167

Query: 217 KT--PKLFALTSPLLTTASG---------TKMGKTLSGA----IWLNKEMTSPYNFWQYW 261
                  F +  PL+               KM K+   A      L+ E +      +  
Sbjct: 168 NRDFGPCFKVPEPLIAAQGARVMGLDDPSVKMSKSHKRAFHALFLLDSEESVIKKIKK-- 225

Query: 262 RNIDDA--------------DVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
               D+              ++++    L+    SEI+  A  +GK+  + KK +  
Sbjct: 226 -ATTDSVGTLIFDVNRPGIYNLLNIYSLLSAKSPSEIE--ATFEGKDYGDFKKALIE 279


>gi|240140668|ref|YP_002965148.1| hypothetical protein MexAM1_META1p4234 [Methylobacterium extorquens
           AM1]
 gi|240010645|gb|ACS41871.1| conserved hypothetical protein with putative pseudouridine
           synthase-like domain [Methylobacterium extorquens AM1]
          Length = 669

 Score = 43.3 bits (101), Expect = 0.072,   Method: Composition-based stats.
 Identities = 10/66 (15%), Positives = 26/66 (39%), Gaps = 1/66 (1%)

Query: 332 HSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
                P +   +     G  +   I +AG A S  +A   +++  + +N  ++++  + +
Sbjct: 4   IPDPSPAVPADQPATPEGERIAKAIARAGIA-SRRDAEALIEAGRVTLNGKVLTSPAINV 62

Query: 392 KLQDFD 397
              D  
Sbjct: 63  TDSDRI 68


>gi|300362472|ref|ZP_07058648.1| tryptophan--tRNA ligase [Lactobacillus gasseri JV-V03]
 gi|300353463|gb|EFJ69335.1| tryptophan--tRNA ligase [Lactobacillus gasseri JV-V03]
          Length = 342

 Score = 43.3 bits (101), Expect = 0.072,   Method: Composition-based stats.
 Identities = 38/225 (16%), Positives = 74/225 (32%), Gaps = 37/225 (16%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     LQ  G ++P  ++    ++       D +R     ++I+ 
Sbjct: 12  PTGK-LHIGHYIGSLKNRVKLQNEGKYEPYIMIADTQAL------TDNAR---DPEKIKN 61

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
           ++ ++  +    +     K+   + +    L  +    +     +    N  +  E  + 
Sbjct: 62  SLIQV-ALDYLAVGLDPEKSTIYVQSQIPALFELTAYYMDLVTVARLERNPTVKTEIKQK 120

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKL 221
             K    + FL  NY + QA D       +   +   G DQ   +    ++         
Sbjct: 121 NFKDSIPVGFL--NYPVSQAADITA----FKATVVPVGDDQEPMLEQTREIVRTFNR--- 171

Query: 222 FALTSPL--------------LTTASGT-KMGKTLSGAIWLNKEM 251
              T  L              L    G  KM K+L  AI+L+ + 
Sbjct: 172 VYNTDILVEPKGYFPPKGQGRLPGLDGNAKMSKSLGNAIYLSDDA 216


>gi|224102881|ref|XP_002312840.1| predicted protein [Populus trichocarpa]
 gi|118482985|gb|ABK93404.1| unknown [Populus trichocarpa]
 gi|222849248|gb|EEE86795.1| predicted protein [Populus trichocarpa]
          Length = 404

 Score = 43.3 bits (101), Expect = 0.073,   Method: Composition-based stats.
 Identities = 40/242 (16%), Positives = 70/242 (28%), Gaps = 32/242 (13%)

Query: 15  RGFIHQISN-PRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +    LD          Y G   ++ +LH GHL   M   +LQ     P+ +
Sbjct: 69  RGVFFAHRDFNEILDAYEKGKKFYLYTGRGPSSEALHLGHLVPFMFTKYLQDVFRVPLVI 128

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                      +   E  + +  +  ++ I     I  +FI             N     
Sbjct: 129 QLTDDEKCMWKNLTVEESQRLARENAKDIIACGFDITRTFIFSDFDYVGGAFYKN----- 183

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY-----DFVELA 188
                  + ++    ++N++            E  +  + F    +QA       F  L 
Sbjct: 184 -------MVKVAKCVTLNKV--QGIFG--FSGEDHIGKISF--PPVQAVPSFPSSFPHLF 230

Query: 189 KNYD---CRLQMGGSDQWGNIICGIDLGERLKTPKLFAL---TSPLLTTASGTKMGKTLS 242
              D   C +     DQ        D   R+   K   +     P L   +G KM  +  
Sbjct: 231 SGKDDLRCLIPC-AIDQDPYFRMTRDAAPRIGYHKPSLIESTFFPALQGETG-KMSASDP 288

Query: 243 GA 244
            +
Sbjct: 289 NS 290


>gi|153809643|ref|ZP_01962311.1| hypothetical protein RUMOBE_00024 [Ruminococcus obeum ATCC 29174]
 gi|149833821|gb|EDM88901.1| hypothetical protein RUMOBE_00024 [Ruminococcus obeum ATCC 29174]
          Length = 356

 Score = 43.3 bits (101), Expect = 0.073,   Method: Composition-based stats.
 Identities = 45/297 (15%), Positives = 89/297 (29%), Gaps = 55/297 (18%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGH--KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +     LQ +G   +   ++    ++  +    ++ R+ +    + 
Sbjct: 11  PTGR-LHVGHYVGSLKERVKLQNSGDYDEVYIMIADAQALTDNAEHPEKVRQNIIQVALD 69

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
                I             K+   + +    L  + +  +     +    N  +  E   
Sbjct: 70  YLACGI----------DPAKSTIFIQSMVPELTELTFYYMNLVTVARVQRNPTVKAEIQM 119

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
              +    + F  F Y I QA D       +   + +G  DQ   +    ++  +  T  
Sbjct: 120 RNFEASIPVGF--FCYPISQAADITAFRATH---VPVG-EDQLPMLEQCKEIVHKFNTVY 173

Query: 221 LFALTSPL-----------LTTASGT-KMGKTLSGAIWL-NKEMTSPYNFWQYW-----R 262
              LT P            L    G  KM K+L   I+L ++E          +      
Sbjct: 174 GETLTDPKIVLPSNKACLRLPGIDGKAKMSKSLGNCIYLSDEEADVKKKIMSMFTDPNHL 233

Query: 263 NIDD------ADVVSFAKRL-------TTLP----MSEIDRMAKLQGKEINEAKKII 302
            + D        V  + +           LP    + E++   +  G    + KK +
Sbjct: 234 RVQDPGRVEGNPVFIYLEAFCKPEYFPEFLPEYQNLEELEDHYRRGGLGDVKVKKFL 290


>gi|62185530|ref|YP_220315.1| tryptophanyl-tRNA synthetase [Chlamydophila abortus S26/3]
 gi|62148597|emb|CAH64369.1| putative tryptophanyl-tRNA synthetase [Chlamydophila abortus S26/3]
          Length = 345

 Score = 43.3 bits (101), Expect = 0.073,   Method: Composition-based stats.
 Identities = 42/246 (17%), Positives = 81/246 (32%), Gaps = 37/246 (15%)

Query: 33  QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG--HKPISLMGGGTSIIGDPSFRDES 90
                   G   T   LH GH    +      +    +    ++    ++         +
Sbjct: 2   NKKTRVLTGDRPTGK-LHLGHWVGSIKNRLDLQNNPAYDCFFIVADLHTL--------TT 52

Query: 91  RRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSV 150
           R  +R +++      I  + + ++  G     + +         I  + LL       S+
Sbjct: 53  R--IRKEQVLNVDNHIYEVLADWLSVGIDPNKSTIYLQSAIP-EIYELHLL--FSMLISI 107

Query: 151 NRMLS----FESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNI 206
           NR++      E  ++    E  LSF    Y +LQ+ D + LAK     +   G D   +I
Sbjct: 108 NRIMGIPSLKEMAKNASIDEGGLSFGLVGYPVLQSADIL-LAKAQLVPV---GKDNEAHI 163

Query: 207 ICGIDLGERLKTPKLFALTSP----------LLTTASGT-KMGKTLSGAIWLNKEMTSPY 255
               D+        L+    P           L    G  KM K+ + AI+L+ +  +  
Sbjct: 164 ELTRDIARNFNR--LYGEIFPEPETLQGELTSLVGIDGQGKMSKSANNAIYLSDDDATIK 221

Query: 256 NFWQYW 261
           +  +  
Sbjct: 222 DKIRKM 227


>gi|295695295|ref|YP_003588533.1| tryptophanyl-tRNA synthetase [Bacillus tusciae DSM 2912]
 gi|295410897|gb|ADG05389.1| tryptophanyl-tRNA synthetase [Bacillus tusciae DSM 2912]
          Length = 327

 Score = 43.3 bits (101), Expect = 0.074,   Method: Composition-based stats.
 Identities = 33/201 (16%), Positives = 67/201 (33%), Gaps = 37/201 (18%)

Query: 138 IDLLREIGSFFS-VNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQ 196
           +  L E    +  + RM      + + + ++ +S   F Y  L A D + L +     + 
Sbjct: 88  LGWLMECLVHYGELGRMTQ---FKEKSEGKEGVSAGLFTYPALMAADIL-LYQATHVPV- 142

Query: 197 MGGSDQWGNIICGIDLGERLKT--PKLFALTSPLLTTASG---------TKMGKTLSGAI 245
             G DQ  ++    DL ER        F +  PL+               KM K+ +   
Sbjct: 143 --GEDQKQHLELTRDLAERFNKRYGDTFVIPEPLIPKVGSRIMSLDDPTKKMSKSSANPG 200

Query: 246 WLNKEMTSPYNFWQYWRN-IDDAD---------------VVSFAKRLTTLPMSEIDRMAK 289
                + SP    +  R  + D++               +++     T   + E+++   
Sbjct: 201 SYISLLDSPDEIRKKIRRAVTDSEAEVRFDPQRKPAVSNLLTIYSSCTDKTIPELEKQYS 260

Query: 290 LQGKEINEAKKIIATEITTMV 310
             G      K+ +A  +   +
Sbjct: 261 GVGYGP--FKQDLAEAVVARL 279


>gi|257068409|ref|YP_003154664.1| tryptophanyl-tRNA synthetase [Brachybacterium faecium DSM 4810]
 gi|256559227|gb|ACU85074.1| tryptophanyl-tRNA synthetase [Brachybacterium faecium DSM 4810]
          Length = 358

 Score = 43.3 bits (101), Expect = 0.074,   Method: Composition-based stats.
 Identities = 61/367 (16%), Positives = 116/367 (31%), Gaps = 70/367 (19%)

Query: 22  SNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQ-LMLLFWLQKTGHKPISLMGGGTSI 80
           S+P  L +L              T + LH GH    L     LQ  G +   ++     I
Sbjct: 27  SDPSGLRMLTGDR---------PTGA-LHIGHYFGSLRNRVRLQDAGVETWLIVADYQVI 76

Query: 81  -----IGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSI 135
                IGD   +   R ++                         +   +  ++     + 
Sbjct: 77  TDREVIGD--IKGSVRELLTDYLAVGI---------------DPERSTIFTHSSVPALNQ 119

Query: 136 KYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRL 195
             +  L  +              + +    + ++  L   Y + QA D +    N    L
Sbjct: 120 LMLPFLSLVTQPELERNPTVKTELAA--AGKSAMGGLLLTYPVHQAADILFCHGN----L 173

Query: 196 QMGGSDQWGNI----ICGIDLGERLKTPKLF-----ALTS--PLLTTASGT-KMGKTLSG 243
              G DQ  +I    +      ER    + +     AL S  P +    G  KM K+   
Sbjct: 174 VPVGRDQLPHIEQTRVIARRFNERYAGGEAYFPEPDALLSEAPTILGLDGEHKMSKSRGN 233

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLP--MSEIDRMAKLQGKEINEAKKI 301
            + L  +        +  +   DAD     +++T  P    E+  +  +  +    A + 
Sbjct: 234 TVMLRMDADETLKKIKKAK--TDAD-----RQITYDPEGRPEVANLLTIASQASGRAPEE 286

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGF 361
           IA EI                 ++ +   + ++H+  I   + E+ +  G L  +++AG 
Sbjct: 287 IAEEIGDR----------GAGTLKLYTAEVLNEHLAPIRARRAELEQDPGYLFQVLRAGN 336

Query: 362 ATSTNEA 368
             +  EA
Sbjct: 337 EKANAEA 343


>gi|189463697|ref|ZP_03012482.1| hypothetical protein BACINT_00028 [Bacteroides intestinalis DSM
           17393]
 gi|189438647|gb|EDV07632.1| hypothetical protein BACINT_00028 [Bacteroides intestinalis DSM
           17393]
          Length = 364

 Score = 43.3 bits (101), Expect = 0.075,   Method: Composition-based stats.
 Identities = 43/247 (17%), Positives = 70/247 (28%), Gaps = 46/247 (18%)

Query: 44  LTASSLHAGHLTQLMLLFW---LQKTGH--KPISLMGGGTSIIGDPSFRDESRRMMRSQE 98
            T   LH GH      L     LQ +G   K    +    ++         +  +   ++
Sbjct: 13  PTGR-LHIGHYVG--SLRRRVELQNSGLYDKIFVFIADAQAL---------TDNVDNPEK 60

Query: 99  IQENIEKIKGIFSSFIKY-----GTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRM 153
           +++N+          + Y        K+   + +    LC + +  +     S    N  
Sbjct: 61  VRQNV------IEVALDYLACGLDPEKSTIFIQSQIAELCELSFYFMNMVTVSRLQRNPT 114

Query: 154 LSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQ----------- 202
           +  E           + F  F Y I QA D           + +G  DQ           
Sbjct: 115 VKAEIQLRNFDASIPVGF--FTYPISQAADITAFKA---TTVPVG-EDQEPMLEQAREIV 168

Query: 203 -WGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYW 261
              N I G  L E        A    L  T    KM K+L   I+L+          +  
Sbjct: 169 RRFNYIYGETLVEPEILLPDNAACLRLPGTDGKAKMSKSLGNCIYLSDSADEIQKKVKSM 228

Query: 262 RNIDDAD 268
               D  
Sbjct: 229 YTDPDHL 235


>gi|224531550|ref|ZP_03672182.1| tryptophanyl-tRNA synthetase [Borrelia valaisiana VS116]
 gi|224511015|gb|EEF81421.1| tryptophanyl-tRNA synthetase [Borrelia valaisiana VS116]
          Length = 350

 Score = 43.3 bits (101), Expect = 0.075,   Method: Composition-based stats.
 Identities = 31/217 (14%), Positives = 66/217 (30%), Gaps = 28/217 (12%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRD-ESRRMMRSQEIQEN 102
            T + LH GH    ++     +  ++   ++    ++   P  +   +      + + + 
Sbjct: 12  PTGA-LHLGHYVGSVVNRLKFQEDYETYFIIADLHTLTTKPDLKSINTIPYNVREMVLDY 70

Query: 103 IEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR 162
           +          I   +   +   L             ++  +     +  +         
Sbjct: 71  LACGINPNKVSIYLQSAIPELFELY--------LIFSMIVTVARLQRIPSIKDMSIAAG- 121

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT---- 218
             +E     L   Y +L + D +    N    L   G D   +I    +L  R       
Sbjct: 122 -LKEIPYGLL--GYPVLMSADILMAKAN----LVPVGRDNESHIEFTRELARRFNHLYKD 174

Query: 219 ------PKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
                   +F  + PL+      KM K+L+ AI+LN 
Sbjct: 175 NFFPIPESVFTDSRPLVGIYGKNKMSKSLNNAIFLND 211


>gi|112489952|pdb|2AKE|A Chain A, Structure Of Human Tryptophanyl-Trna Synthetase In Complex
           With Trna(Trp)
 gi|112490495|pdb|2DR2|A Chain A, Structure Of Human Tryptophanyl-Trna Synthetase In Complex
           With Trna(Trp)
          Length = 384

 Score = 43.3 bits (101), Expect = 0.075,   Method: Composition-based stats.
 Identities = 39/248 (15%), Positives = 84/248 (33%), Gaps = 31/248 (12%)

Query: 15  RGFIHQISN-PRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +  + LD   ++     Y G   ++ ++H GHL   +   WLQ   + P+ +
Sbjct: 41  RGIFFSHRDMNQVLDAYENKKPFYLYTGRGPSSEAMHVGHLIPFIFTKWLQDVFNVPLVI 100

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                         D+ + + +   + +            I  G       + ++  ++ 
Sbjct: 101 -----------QMTDDEKYLWKDLTLDQAYSYAVENAKDIIACGFDINKTFIFSDLDYMG 149

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA-----YDFVELA 188
                   + +     + + ++F  V+       S    + ++  +QA       F ++ 
Sbjct: 150 --MSSGFYKNV---VKIQKHVTFNQVKGIFGFTDSDCIGKISFPAIQAAPSFSNSFPQIF 204

Query: 189 K---NYDCRLQMGGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTASGTKMGKTLS 242
           +   +  C +     DQ        D+  R+  PK   L +   P L  A  TKM  +  
Sbjct: 205 RDRTDIQCLIPC-AIDQDPYFRMTRDVAPRIGYPKPALLHSTFFPALQGAQ-TKMSASDP 262

Query: 243 G-AIWLNK 249
             +I+L  
Sbjct: 263 NSSIFLTD 270


>gi|50513261|pdb|1O5T|A Chain A, Crystal Structure Of The Aminoacylation Catalytic Fragment
           Of Human Tryptophanyl-Trna Synthetase
          Length = 378

 Score = 43.3 bits (101), Expect = 0.075,   Method: Composition-based stats.
 Identities = 39/248 (15%), Positives = 84/248 (33%), Gaps = 31/248 (12%)

Query: 15  RGFIHQISN-PRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +  + LD   ++     Y G   ++ ++H GHL   +   WLQ   + P+ +
Sbjct: 41  RGIFFSHRDMNQVLDAYENKKPFYLYTGRGPSSEAMHVGHLIPFIFTKWLQDVFNVPLVI 100

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                         D+ + + +   + +            I  G       + ++  ++ 
Sbjct: 101 -----------QMTDDEKYLWKDLTLDQAYSYAVENAKDIIACGFDINKTFIFSDLDYMG 149

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA-----YDFVELA 188
                   + +     + + ++F  V+       S    + ++  +QA       F ++ 
Sbjct: 150 --MSSGFYKNV---VKIQKHVTFNQVKGIFGFTDSDCIGKISFPAIQAAPSFSNSFPQIF 204

Query: 189 K---NYDCRLQMGGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTASGTKMGKTLS 242
           +   +  C +     DQ        D+  R+  PK   L +   P L  A  TKM  +  
Sbjct: 205 RDRTDIQCLIPC-AIDQDPYFRMTRDVAPRIGYPKPALLHSTFFPALQGAQ-TKMSASDP 262

Query: 243 G-AIWLNK 249
             +I+L  
Sbjct: 263 NSSIFLTD 270


>gi|260893345|ref|YP_003239442.1| ribosomal protein S4 [Ammonifex degensii KC4]
 gi|260865486|gb|ACX52592.1| ribosomal protein S4 [Ammonifex degensii KC4]
          Length = 208

 Score = 43.3 bits (101), Expect = 0.076,   Method: Composition-based stats.
 Identities = 18/115 (15%), Positives = 42/115 (36%), Gaps = 14/115 (12%)

Query: 284 IDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISK 343
           + R       ++ E +K         ++G  EA+         F  +   + +   ++ +
Sbjct: 46  VRRKMTEYAMQLREKQKA------KRIYGVLEAQ-----FRNYFAQAERQKGLTGENLLR 94

Query: 344 DEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
               R   ++    + G A S  EAR+ ++   I +N   +      +++ D  S
Sbjct: 95  LLERRLDNVVY---RLGMAASRAEARQLVRHGHILVNGRRVDIPSYLVEVGDKIS 146


>gi|186972760|pdb|2QUJ|B Chain B, Crystal Structures Of Human Tryptophanyl-Trna Synthetase
           In Complex With Trpamp
          Length = 384

 Score = 43.3 bits (101), Expect = 0.076,   Method: Composition-based stats.
 Identities = 39/248 (15%), Positives = 84/248 (33%), Gaps = 31/248 (12%)

Query: 15  RGFIHQISN-PRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +  + LD   ++     Y G   ++ ++H GHL   +   WLQ   + P+ +
Sbjct: 41  RGIFFSHRDMNQVLDAYENKKPFYLYTGRGPSSEAMHVGHLIPFIFTKWLQDVFNVPLVI 100

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                         D+ + + +   + +            I  G       + ++  ++ 
Sbjct: 101 -----------QMTDDEKYLWKDLTLDQAYSYAVENAKDIIACGFDINKTFIFSDLDYMG 149

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA-----YDFVELA 188
                   + +     + + ++F  V+       S    + ++  +QA       F ++ 
Sbjct: 150 --MSSGFYKNV---VKIQKHVTFNQVKGIFGFTDSDCIGKISFPAIQAAPSFSNSFPQIF 204

Query: 189 K---NYDCRLQMGGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTASGTKMGKTLS 242
           +   +  C +     DQ        D+  R+  PK   L +   P L  A  TKM  +  
Sbjct: 205 RDRTDIQCLIPC-AIDQDPYFRMTRDVAPRIGYPKPALLHSTFFPALQGAQ-TKMSASDP 262

Query: 243 G-AIWLNK 249
             +I+L  
Sbjct: 263 NSSIFLTD 270


>gi|228472823|ref|ZP_04057581.1| tryptophan-tRNA ligase [Capnocytophaga gingivalis ATCC 33624]
 gi|228275874|gb|EEK14640.1| tryptophan-tRNA ligase [Capnocytophaga gingivalis ATCC 33624]
          Length = 323

 Score = 43.3 bits (101), Expect = 0.077,   Method: Composition-based stats.
 Identities = 23/108 (21%), Positives = 40/108 (37%), Gaps = 13/108 (12%)

Query: 147 FFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNI 206
           FF   R+    S + +  R + ++   F Y +L A D +     YD  +   G DQ  ++
Sbjct: 98  FFPYQRLTLAHSFKDKADRLEDVNTGLFTYPMLMAADILL----YDAEIVPVGKDQLQHL 153

Query: 207 ICGIDLGE--RLKTPKLFALTSP-------LLTTASGTKMGKTLSGAI 245
               D+      +  + F L          ++    G KM K+    I
Sbjct: 154 EFARDVAGRFNYQMGETFVLPKESIREDIMIIPGTDGEKMSKSRRNYI 201


>gi|67458974|ref|YP_246598.1| lysyl-tRNA synthetase [Rickettsia felis URRWXCal2]
 gi|75536588|sp|Q4ULZ0|SYK_RICFE RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|67004507|gb|AAY61433.1| Lysyl-tRNA synthetase [Rickettsia felis URRWXCal2]
          Length = 525

 Score = 43.3 bits (101), Expect = 0.077,   Method: Composition-based stats.
 Identities = 22/135 (16%), Positives = 41/135 (30%), Gaps = 8/135 (5%)

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            DF           +M G D   N     ++   L       L   L    +G K+ K+ 
Sbjct: 236 PDFGMRWAALKVDYEMYGKDHLANARLYSEICRILGGKPPVQLCYELFLDENGEKISKSK 295

Query: 242 SGAIWLNK-EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINE 297
             +I ++     +P      +      +     +    +    +D       K   E + 
Sbjct: 296 GNSISVDDWLKYAPVESMALFMY---QNPTRAKRLFFDVIPKNVDEYITFNQKYHLEEDR 352

Query: 298 AKKIIATEITTMVHG 312
           AK+  A  +  + HG
Sbjct: 353 AKR-FANPVYHIHHG 366


>gi|313899183|ref|ZP_07832703.1| tryptophan--tRNA ligase [Clostridium sp. HGF2]
 gi|312956006|gb|EFR37654.1| tryptophan--tRNA ligase [Clostridium sp. HGF2]
          Length = 328

 Score = 43.3 bits (101), Expect = 0.077,   Method: Composition-based stats.
 Identities = 41/295 (13%), Positives = 89/295 (30%), Gaps = 45/295 (15%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   T   L  G+    +  F   +  ++    +    + I  P  R E ++  +     
Sbjct: 7   GIKPTGR-LTLGNYIGAIRNFVAYQDDYEMYVFIANMHA-ITVPQERAELKKNTKDLIAL 64

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
                +    ++          A +     W+  +     + E+          +     
Sbjct: 65  YLAAGLDPKKATIFLQSDVHEHAEL----GWI--MTCNSYMGELQRMTQYKDKTAK---- 114

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT-- 218
                E  ++   F Y  L A D +    +Y   + +G  DQ  ++    +L ER     
Sbjct: 115 ----GETGITAGLFTYPSLMAADILLYDADY---VPVG-LDQKQHVELTRNLAERFNNRY 166

Query: 219 PKLFALTSPLLTTASGT---------KMGKTLSGAIWLNKEMTSPYNFWQYWRN-IDDAD 268
              F +  PL++              KM K+          +  P    +   + + D+ 
Sbjct: 167 GDTFVIPEPLVSKVGAKIYSLQDPTKKMSKSEENPKGTIDLLDEPAVARKKIMSAVTDSL 226

Query: 269 ------------VVSFAKRLTTLPMSEIDRMAKL-QGKEINEAKKIIATEITTMV 310
                       V +    L++L    I+ + +  +GK   + KK +   +   +
Sbjct: 227 GIIQYDPEHQPGVSNLLTILSSLNGESIESIIERYKGKGYGDFKKEVGAAVFDFL 281


>gi|306822649|ref|ZP_07456027.1| ribosomal RNA large subunit methyltransferase J [Bifidobacterium
           dentium ATCC 27679]
 gi|309800961|ref|ZP_07695093.1| ribosomal RNA large subunit methyltransferase J [Bifidobacterium
           dentium JCVIHMP022]
 gi|304554194|gb|EFM42103.1| ribosomal RNA large subunit methyltransferase J [Bifidobacterium
           dentium ATCC 27679]
 gi|308222497|gb|EFO78777.1| ribosomal RNA large subunit methyltransferase J [Bifidobacterium
           dentium JCVIHMP022]
          Length = 252

 Score = 43.3 bits (101), Expect = 0.077,   Method: Composition-based stats.
 Identities = 10/55 (18%), Positives = 26/55 (47%), Gaps = 2/55 (3%)

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDST--GNIKLSFG 407
            ++  G + S ++A+R +    + +N  ++S    ++   D  +   G+  +S G
Sbjct: 15  ALLDRGLSDSRSKAQRLIVQGKVSVNGVVVSKASAKVSDDDVIAADRGDDYVSRG 69


>gi|295680745|ref|YP_003609319.1| tryptophanyl-tRNA synthetase [Burkholderia sp. CCGE1002]
 gi|295440640|gb|ADG19808.1| tryptophanyl-tRNA synthetase [Burkholderia sp. CCGE1002]
          Length = 338

 Score = 43.3 bits (101), Expect = 0.077,   Method: Composition-based stats.
 Identities = 39/224 (17%), Positives = 68/224 (30%), Gaps = 37/224 (16%)

Query: 45  TASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIE 104
           T   LH GH    +      +   +   L+    ++       +  R    +Q + E   
Sbjct: 16  TGP-LHLGHYIGSLRARVQLQHEAQQFLLLADTQALTD-----NVGRHQKVTQNVIEVAL 69

Query: 105 KIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRM----LSFESVR 160
               +          K+   + +        +  +L + + +  +V R+       E +R
Sbjct: 70  DYLAVG-----IDPAKSTIFIQS-----QVPELAELFQYLLNVVTVARLERNPTIKEEIR 119

Query: 161 SR-LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
            R  +R+    FL   Y I QA D       +   + +G  DQ   I    +L  R    
Sbjct: 120 LRGFERDIPAGFL--TYPISQAADITAFKATH---VPVG-DDQLPMIEQTNELVRRFNNT 173

Query: 220 ---------KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTS 253
                    +        L    G  KM K+L  AI L      
Sbjct: 174 VDRPVLVECEAVLSQVTRLPGIDGKAKMSKSLGNAIALGATPDE 217


>gi|157147660|ref|YP_001454979.1| tryptophanyl-tRNA synthetase II [Citrobacter koseri ATCC BAA-895]
 gi|157084865|gb|ABV14543.1| hypothetical protein CKO_03463 [Citrobacter koseri ATCC BAA-895]
          Length = 335

 Score = 43.3 bits (101), Expect = 0.077,   Method: Composition-based stats.
 Identities = 34/216 (15%), Positives = 63/216 (29%), Gaps = 27/216 (12%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
            T + LH GH    +      +  H+   L+     +       + +        I E +
Sbjct: 13  PTGA-LHLGHYVGSLRQRVALQHTHQQFVLIADLQGLTD-----NGTNPQKIRDNIPEVL 66

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL 163
                            T   + +    L  +  + +     +    N  +  E  +   
Sbjct: 67  ADYLAAG-----IDPELTTLCLQSALPALAELTMLYMNVVTVARVERNPTVKNEIAQKGF 121

Query: 164 KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT----- 218
            R   + F    Y I QA D       Y   + +G  DQ   I    ++  ++ +     
Sbjct: 122 TRSLPVGF--MVYPISQAADITAFKAEY---VPVG-DDQLPMIEQTNEIVHKMNSLLPAP 175

Query: 219 ---PKLFAL--TSPLLTTASGTKMGKTLSGAIWLNK 249
                   L  T  L +   G KM K+L   + L+ 
Sbjct: 176 LLRHCQAILSDTGRLPSIDGGAKMSKSLGNTLQLSA 211


>gi|163849746|ref|YP_001637789.1| tryptophanyl-tRNA synthetase [Methylobacterium extorquens PA1]
 gi|218528387|ref|YP_002419203.1| tryptophanyl-tRNA synthetase [Methylobacterium chloromethanicum
           CM4]
 gi|163661351|gb|ABY28718.1| tryptophanyl-tRNA synthetase [Methylobacterium extorquens PA1]
 gi|218520690|gb|ACK81275.1| tryptophanyl-tRNA synthetase [Methylobacterium chloromethanicum
           CM4]
          Length = 353

 Score = 43.3 bits (101), Expect = 0.077,   Method: Composition-based stats.
 Identities = 57/367 (15%), Positives = 112/367 (30%), Gaps = 88/367 (23%)

Query: 41  GYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTS--IIGDPSFRDESRRMMRSQ 97
           G   T + LH G+    +     +Q    + +  +    +  +  DP       R + + 
Sbjct: 11  GVQPTGN-LHLGNYLGAIKRFVEMQARDAQCLYCVVDLHAITMWQDPEALKGQIREVTAA 69

Query: 98  EIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFE 157
            +   I+  + I  +  +       A + N                +     +NRM  F+
Sbjct: 70  FLAAGIDPKRSIVFNQSQVPQHAELAWIFN---------------CVARLGWLNRMTQFK 114

Query: 158 SVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK 217
               + +   S+   +  Y +L A D +   +     +   G DQ  ++    D+ ++  
Sbjct: 115 DKAGKDRENASIGLYD--YPVLMAADILA-YRATHVPV---GEDQKQHLELTRDIAQKFN 168

Query: 218 ------------TPKLFALTSPLLTTA--------SGT-KMGKTLSGAIWLNKEMTSPYN 256
                         + F +T PL+            GT KM K+             P  
Sbjct: 169 NDFAGSILAHGHGEQFFPITEPLIGGPAARVMSLRDGTKKMSKS------------DPSE 216

Query: 257 FWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAK---KIIATEITTMVHGR 313
            +      DDAD +                      +++ +AK   + + +E+  +  GR
Sbjct: 217 -YSRIALTDDADAI---------------------AQKVRKAKTDPEPLPSEVAGLA-GR 253

Query: 314 EEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLK 373
            EA+             I    +          S    L+ L V+   A    E +R + 
Sbjct: 254 PEADNLVGIFAAL--RGITRDEVLADFGGAQFSSFKPALVDLAVET-LAPIGAEMKRLVA 310

Query: 374 SNAIKIN 380
             A  I+
Sbjct: 311 DPA-YID 316


>gi|157825634|ref|YP_001493354.1| lysyl-tRNA synthetase [Rickettsia akari str. Hartford]
 gi|166229820|sp|A8GN71|SYK_RICAH RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|157799592|gb|ABV74846.1| lysyl-tRNA synthetase [Rickettsia akari str. Hartford]
          Length = 529

 Score = 43.3 bits (101), Expect = 0.077,   Method: Composition-based stats.
 Identities = 22/135 (16%), Positives = 41/135 (30%), Gaps = 8/135 (5%)

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            DF           +M G D   N     ++   L       L   L    +G K+ K+ 
Sbjct: 236 PDFGMRWAALKVDYEMYGKDHLANARLYSEICRILGGKPPVQLCYELFLDENGEKISKSK 295

Query: 242 SGAIWLNK-EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINE 297
             +I ++     +P      +      +     +    +    +D       K   E + 
Sbjct: 296 GNSISVDDWLKYAPVESMALFMY---QNPTRAKRLFFDVIPKNVDEYITFNQKYHLEEDR 352

Query: 298 AKKIIATEITTMVHG 312
           AK+  A  +  + HG
Sbjct: 353 AKR-FANPVYHIHHG 366


>gi|73963985|ref|XP_868542.1| PREDICTED: similar to Tryptophanyl-tRNA synthetase
           (Tryptophan--tRNA ligase) (TrpRS) (IFP53) (hWRS) isoform
           2 [Canis familiaris]
          Length = 476

 Score = 43.3 bits (101), Expect = 0.078,   Method: Composition-based stats.
 Identities = 14/60 (23%), Positives = 26/60 (43%), Gaps = 1/60 (1%)

Query: 15  RGFIHQISN-PRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +  + LD   ++     Y G   ++ ++H GHL   +   WLQ   + P+ +
Sbjct: 139 RGIFFSHRDMNQILDAYENKKPFYLYTGRGPSSEAMHVGHLIPFIFTKWLQDVFNVPLVI 198


>gi|197100226|ref|NP_001125071.1| tryptophanyl-tRNA synthetase, cytoplasmic [Pongo abelii]
 gi|55726863|emb|CAH90191.1| hypothetical protein [Pongo abelii]
          Length = 472

 Score = 43.3 bits (101), Expect = 0.078,   Method: Composition-based stats.
 Identities = 37/235 (15%), Positives = 80/235 (34%), Gaps = 30/235 (12%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSF 86
           LD   ++     Y G   ++ ++H GHL   +   WLQ   + P+ +             
Sbjct: 148 LDAYENKKPFYLYTGRGPSSEAMHVGHLIPFIFTKWLQDVFNVPLVI-----------QM 196

Query: 87  RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGS 146
            D+ + + +   + +            I  G       + ++  ++         + +  
Sbjct: 197 TDDEKYLWKDLTLDQAYSYAVENAKDIIACGFDINKTFIFSDLDYMG--MSSGFYKNV-- 252

Query: 147 FFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA-----YDFVELAK---NYDCRLQMG 198
              + + ++F  V+       S    + ++  +QA       F ++ +   +  C +   
Sbjct: 253 -VKIQKHVTFNQVKGIFGFTDSDCIGKISFPAIQAAPSFSNSFPQIFRDRTDIQCLIPC- 310

Query: 199 GSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTASGTKMGKTLSG-AIWLNK 249
             DQ        D+  R+  PK   L +   P L  A  TKM  +    +I+L  
Sbjct: 311 AIDQDPYFRMTRDVAPRIGYPKPALLHSTFFPALQGAQ-TKMSASDPNSSIFLTD 364


>gi|313140389|ref|ZP_07802582.1| conserved hypothetical protein [Bifidobacterium bifidum NCIMB
           41171]
 gi|313132899|gb|EFR50516.1| conserved hypothetical protein [Bifidobacterium bifidum NCIMB
           41171]
          Length = 264

 Score = 43.3 bits (101), Expect = 0.079,   Method: Composition-based stats.
 Identities = 10/55 (18%), Positives = 23/55 (41%), Gaps = 2/55 (3%)

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD--STGNIKLSFG 407
           LIV  G   S ++A+R ++   + ++   ++     +          G+  +S G
Sbjct: 19  LIVGLGLVPSRSKAQRLIRDGHVLVDGVAVTKPAANVATASSITVDKGDDYVSRG 73


>gi|310287601|ref|YP_003938859.1| FtsJ-like methyltransferase domain [Bifidobacterium bifidum S17]
 gi|311064517|ref|YP_003971242.1| hemolysinIII-like protein [Bifidobacterium bifidum PRL2010]
 gi|309251537|gb|ADO53285.1| conserved hypothetical protein with FtsJ-like methyltransferase
           domain [Bifidobacterium bifidum S17]
 gi|310866836|gb|ADP36205.1| Hemolysin-like protein with S4 and FtsJ-like methyltransferase
           domains [Bifidobacterium bifidum PRL2010]
          Length = 252

 Score = 43.3 bits (101), Expect = 0.079,   Method: Composition-based stats.
 Identities = 10/55 (18%), Positives = 23/55 (41%), Gaps = 2/55 (3%)

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD--STGNIKLSFG 407
           LIV  G   S ++A+R ++   + ++   ++     +          G+  +S G
Sbjct: 7   LIVGLGLVPSRSKAQRLIRDGHVLVDGVAVTKPAANVATASSITVDKGDDYVSRG 61


>gi|261327309|emb|CBH10285.1| tryptophanyl-tRNA synthetase, putative [Trypanosoma brucei
           gambiense DAL972]
          Length = 389

 Score = 43.3 bits (101), Expect = 0.079,   Method: Composition-based stats.
 Identities = 22/106 (20%), Positives = 37/106 (34%), Gaps = 3/106 (2%)

Query: 15  RGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +   L  +   G     Y G   ++ S+H GHL   M   WLQ +   P+ +
Sbjct: 51  RGIFFSHRDLNLLLDVYESGQPFYLYTGRGPSSESMHMGHLIPFMFTKWLQDSFRVPLVI 110

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFI--KYG 117
                      +   E    M ++ I++ I        +FI   + 
Sbjct: 111 QMTDDEKFYFRNIPMEQVEAMTTENIKDIIAMGFDPELTFIFRDFD 156


>gi|224283243|ref|ZP_03646565.1| Putative rRNA methylase [Bifidobacterium bifidum NCIMB 41171]
          Length = 252

 Score = 43.3 bits (101), Expect = 0.079,   Method: Composition-based stats.
 Identities = 10/55 (18%), Positives = 23/55 (41%), Gaps = 2/55 (3%)

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD--STGNIKLSFG 407
           LIV  G   S ++A+R ++   + ++   ++     +          G+  +S G
Sbjct: 7   LIVGLGLVPSRSKAQRLIRDGHVLVDGVAVTKPAANVATASSITVDKGDDYVSRG 61


>gi|116628877|ref|YP_814049.1| tryptophanyl-tRNA synthetase II [Lactobacillus gasseri ATCC 33323]
 gi|116094459|gb|ABJ59611.1| tryptophanyl-tRNA synthetase [Lactobacillus gasseri ATCC 33323]
          Length = 346

 Score = 43.3 bits (101), Expect = 0.079,   Method: Composition-based stats.
 Identities = 38/225 (16%), Positives = 74/225 (32%), Gaps = 37/225 (16%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     LQ  G ++P  ++    ++       D +R     ++I+ 
Sbjct: 16  PTGK-LHIGHYIGSLKNRVKLQNEGKYEPYIMIADTQAL------TDNAR---DPEKIKN 65

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
           ++ ++  +    +     K+   + +    L  +    +     +    N  +  E  + 
Sbjct: 66  SLIQV-ALDYLAVGLDPEKSTIYVQSQIPALFELTAYYMDLVTVARLERNPTVKTEIKQK 124

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKL 221
             K    + FL  NY + QA D       +   +   G DQ   +    ++         
Sbjct: 125 NFKDSIPVGFL--NYPVSQAADITA----FKATVVPVGDDQEPMLEQTREIVRTFNR--- 175

Query: 222 FALTSPL--------------LTTASGT-KMGKTLSGAIWLNKEM 251
              T  L              L    G  KM K+L  AI+L+ + 
Sbjct: 176 VYNTDILVEPKGYFPPKGQGRLPGLDGNAKMSKSLGNAIYLSDDA 220


>gi|327310786|ref|YP_004337683.1| tryptophanyl-tRNA synthetase [Thermoproteus uzoniensis 768-20]
 gi|326947265|gb|AEA12371.1| tryptophanyl-tRNA synthetase [Thermoproteus uzoniensis 768-20]
          Length = 374

 Score = 43.3 bits (101), Expect = 0.079,   Method: Composition-based stats.
 Identities = 20/76 (26%), Positives = 27/76 (35%), Gaps = 3/76 (3%)

Query: 12  LSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWL-QKTGHK 69
           L  RGF +   +  E L    S      Y G   +   +H GH+   +LL W   K G +
Sbjct: 48  LIRRGFFYAHRDFDEILRWHGSGRPWALYTGRGPSGP-VHIGHMVPWILLKWFSDKFGLE 106

Query: 70  PISLMGGGTSIIGDPS 85
               M        DP 
Sbjct: 107 VYFQMTDDEKFYDDPE 122


>gi|312142411|ref|YP_003993857.1| RNA-binding S4 domain protein [Halanaerobium sp. 'sapolanicus']
 gi|311903062|gb|ADQ13503.1| RNA-binding S4 domain protein [Halanaerobium sp. 'sapolanicus']
          Length = 72

 Score = 43.3 bits (101), Expect = 0.079,   Method: Composition-based stats.
 Identities = 11/62 (17%), Positives = 24/62 (38%), Gaps = 4/62 (6%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD----STGNIKLS 405
           + L   +  A  A S  EA+  ++   + +N  + +     +K+ D      +     +S
Sbjct: 11  INLDQFLKWANIAMSGGEAKYLIQEGEVTVNGEVETQRGKTLKVGDVVSLTGNDKKYIVS 70

Query: 406 FG 407
            G
Sbjct: 71  RG 72


>gi|254839593|pdb|3I05|A Chain A, Tryptophanyl-Trna Synthetase From Trypanosoma Brucei
 gi|254839594|pdb|3I05|B Chain B, Tryptophanyl-Trna Synthetase From Trypanosoma Brucei
          Length = 395

 Score = 43.3 bits (101), Expect = 0.079,   Method: Composition-based stats.
 Identities = 22/106 (20%), Positives = 37/106 (34%), Gaps = 3/106 (2%)

Query: 15  RGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +   L  +   G     Y G   ++ S+H GHL   M   WLQ +   P+ +
Sbjct: 57  RGIFFSHRDLNLLLDVYESGQPFYLYTGRGPSSESMHMGHLIPFMFTKWLQDSFRVPLVI 116

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFI--KYG 117
                      +   E    M ++ I++ I        +FI   + 
Sbjct: 117 QMTDDEKFYFRNIPMEQVEAMTTENIKDIIAMGFDPELTFIFRDFD 162


>gi|229825235|ref|ZP_04451304.1| hypothetical protein GCWU000182_00588 [Abiotrophia defectiva ATCC
           49176]
 gi|229790607|gb|EEP26721.1| hypothetical protein GCWU000182_00588 [Abiotrophia defectiva ATCC
           49176]
          Length = 360

 Score = 43.3 bits (101), Expect = 0.079,   Method: Composition-based stats.
 Identities = 46/234 (19%), Positives = 72/234 (30%), Gaps = 36/234 (15%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG-HKPISLMGGGTSIIGDPSF-RDESRRMMRSQEIQ 100
            T   LH GH    +     LQ +G    I +M      I D     D +      +  Q
Sbjct: 11  PTGK-LHLGHYVGSLKRRVELQNSGEFDEIYIM------IADAQALTDNAENP--EKVRQ 61

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
             IE      S  +     K    + +    LC + +  +     S    N  +  E   
Sbjct: 62  NIIEVALDYLSVGLD--PEKCTLFIQSQIPELCELSFYYMDLVTVSRLQRNPTVKSEIQM 119

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
              +    + F  F Y I QA D       +   + +G  DQ   I    ++  +  +  
Sbjct: 120 RNFETSIPVGF--FTYPISQAADITAFKATH---VPVG-EDQEPMIEQTREIVRKFNSTY 173

Query: 221 LFALTSP------------LLTTASGTKMGKTLSGAIWLNKE----MTSPYNFW 258
             AL  P            L  T    KM K+L   I+L+       T   + +
Sbjct: 174 NEALVEPNIMLPDNEACKRLPGTDGKAKMSKSLGNCIYLSDSAEDVKTKIMSMY 227


>gi|218884768|ref|YP_002429150.1| tryptophanyl-tRNA synthetase [Desulfurococcus kamchatkensis 1221n]
 gi|218766384|gb|ACL11783.1| tryptophanyl-tRNA synthetase [Desulfurococcus kamchatkensis 1221n]
          Length = 371

 Score = 43.3 bits (101), Expect = 0.079,   Method: Composition-based stats.
 Identities = 44/238 (18%), Positives = 80/238 (33%), Gaps = 37/238 (15%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSF 86
           L+ L     V    G+  +    H G       L +LQ  G      +    + I     
Sbjct: 60  LEALKRGEKVAVLTGFMPSGRP-HLGTAMVYEELKFLQSLGAHIKIAIADAEAYI----V 114

Query: 87  RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGS 146
           R E R    S+ I+  +E      +  I +G    +A            +Y  L++    
Sbjct: 115 RREDR----SEVIRRGVE----FVAHSIAWGINPDNAEFYYQTA--MDNEYYRLIQLFSR 164

Query: 147 FFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN----YDCRLQMGGSDQ 202
             +   M   E++   +   + ++       + Q+ D + L  +    Y   +   G+DQ
Sbjct: 165 KITAAEM---EAIYGDINPGKIMA------ALTQSADILHLQLDKYGGYKYIVVPVGADQ 215

Query: 203 WGNIICGIDLGERLKTPKLFALTSP------LLTTASGTKMGKTLSGA-IWLNKEMTS 253
             ++    D+ +R +    F L  P      LL    G KM K+     I L+ +   
Sbjct: 216 DPHLRLTRDIADRFEQE--FGLKRPSSIYHKLLRGLDGNKMSKSRPEYAIHLDDDPEM 271


>gi|163856149|ref|YP_001630447.1| tryptophanyl-tRNA synthetase [Bordetella petrii DSM 12804]
 gi|163259877|emb|CAP42178.1| trpS [Bordetella petrii]
          Length = 447

 Score = 43.3 bits (101), Expect = 0.079,   Method: Composition-based stats.
 Identities = 21/97 (21%), Positives = 38/97 (39%), Gaps = 20/97 (20%)

Query: 164 KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT----- 218
           + +  ++   F+Y IL A D + +   +   +   G DQ  ++    D+ +R        
Sbjct: 124 EPDDGITMGLFSYPILMAADIL-MFNAHKVPV---GRDQIQHLEMARDIAQRFNHLYGRD 179

Query: 219 ----PKLFA----LTSPLLTTASGTKMGKTLSGAIWL 247
               P++       T P L    G KM K+ +  I L
Sbjct: 180 YFVLPEVVIEEEVATLPGL---DGRKMSKSYNNTIPL 213


>gi|72387447|ref|XP_844148.1| tryptophanyl-tRNA synthetase [Trypanosoma brucei TREU927]
 gi|62360656|gb|AAX81067.1| tryptophanyl-tRNA synthetase, putative [Trypanosoma brucei]
 gi|70800680|gb|AAZ10589.1| tryptophanyl-tRNA synthetase, putative [Trypanosoma brucei brucei
           strain 927/4 GUTat10.1]
          Length = 389

 Score = 43.3 bits (101), Expect = 0.079,   Method: Composition-based stats.
 Identities = 22/106 (20%), Positives = 37/106 (34%), Gaps = 3/106 (2%)

Query: 15  RGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +   L  +   G     Y G   ++ S+H GHL   M   WLQ +   P+ +
Sbjct: 51  RGIFFSHRDLNLLLDVYESGQPFYLYTGRGPSSESMHMGHLIPFMFTKWLQDSFRVPLVI 110

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFI--KYG 117
                      +   E    M ++ I++ I        +FI   + 
Sbjct: 111 QMTDDEKFYFRNIPMEQVEAMTTENIKDIIAMGFDPELTFIFRDFD 156


>gi|302205610|gb|ADL09952.1| tryptophanyl-tRNA synthetase [Corynebacterium pseudotuberculosis
           C231]
 gi|308275846|gb|ADO25745.1| tryptophanyl-tRNA synthetase [Corynebacterium pseudotuberculosis
           I19]
          Length = 387

 Score = 43.3 bits (101), Expect = 0.080,   Method: Composition-based stats.
 Identities = 40/263 (15%), Positives = 86/263 (32%), Gaps = 32/263 (12%)

Query: 19  HQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGT 78
            Q +    +    +        G   TA S H G+    +  +   + G+     +    
Sbjct: 38  KQDTRITIMTESKAVKKQRVLSGIQPTADSYHLGNYLGALKQWIDLQDGYDAFYFIPDLH 97

Query: 79  SIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYI 138
           +I  D   ++     +R + I    + +       +     K+   + ++      + +I
Sbjct: 98  AITVDQDPKE-----LRQRTIAGAAQLLA------LGIDPEKSTLFVQSHVPEHAELGWI 146

Query: 139 DLLREIGSFFSVNRMLS-FESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQM 197
             +  +  F   +RM    +    R     S     F Y +L A D + L +     +  
Sbjct: 147 --MTCLTGFGEASRMTQFKDKSAKRGADRTSAGL--FTYPMLMAADIL-LYRPQLVPV-- 199

Query: 198 GGSDQWGNIICGIDLGERLKT--PKLFALTSPLLTTASGT---------KMGKTLSGAIW 246
            G DQ  ++     L ER  +   K F +   ++   +           KM K+ +    
Sbjct: 200 -GEDQRQHLELTRTLAERFNSRFKKTFVVPEGIIPEGAAKIYDLQDPTSKMSKSGTNPKG 258

Query: 247 LNKEMTSPYNFWQYWRN-IDDAD 268
           L   +  P    +  ++ + D+D
Sbjct: 259 LINLLDEPKVSIKRIKSAVTDSD 281


>gi|227831921|ref|YP_002833628.1| hypothetical protein cauri_0091 [Corynebacterium aurimucosum ATCC
           700975]
 gi|262183175|ref|ZP_06042596.1| hypothetical protein CaurA7_04220 [Corynebacterium aurimucosum ATCC
           700975]
 gi|227452937|gb|ACP31690.1| hypothetical protein cauri_0091 [Corynebacterium aurimucosum ATCC
           700975]
          Length = 102

 Score = 43.3 bits (101), Expect = 0.080,   Method: Composition-based stats.
 Identities = 7/51 (13%), Positives = 17/51 (33%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
              + L   +  A    +  EA+  ++   + +N  +       + L D  
Sbjct: 18  GESIKLGQFLKLASLVATGGEAKELIEQGQVTVNGEVTKQRGATLALGDVI 68


>gi|224369328|ref|YP_002603492.1| TrpS [Desulfobacterium autotrophicum HRM2]
 gi|223692045|gb|ACN15328.1| TrpS [Desulfobacterium autotrophicum HRM2]
          Length = 336

 Score = 43.3 bits (101), Expect = 0.080,   Method: Composition-based stats.
 Identities = 19/91 (20%), Positives = 35/91 (38%), Gaps = 13/91 (14%)

Query: 166 EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALT 225
           ++ ++   F+Y +L A D +        ++ +G SDQ  ++    D+  R          
Sbjct: 129 DKDITMGLFSYPVLMAADILMFNAR---KVPVG-SDQIQHLEMARDIAGRFNNTYGTLFE 184

Query: 226 SP---------LLTTASGTKMGKTLSGAIWL 247
            P         +L    G KM K+ +  I L
Sbjct: 185 FPEAVVDEKTAVLAGLDGRKMSKSYNNTIPL 215


>gi|240136954|ref|YP_002961423.1| Tryptophanyl tRNA synthetase [Methylobacterium extorquens AM1]
 gi|19338613|gb|AAL86730.1|AF416776_8 tryptophanyl-tRNA synthetase [Methylobacterium extorquens AM1]
 gi|240006920|gb|ACS38146.1| Tryptophanyl tRNA synthetase [Methylobacterium extorquens AM1]
          Length = 353

 Score = 43.3 bits (101), Expect = 0.080,   Method: Composition-based stats.
 Identities = 57/367 (15%), Positives = 113/367 (30%), Gaps = 88/367 (23%)

Query: 41  GYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTS--IIGDPSFRDESRRMMRSQ 97
           G   T + LH G+    +     +Q    + +  +    +  +  DP       R + + 
Sbjct: 11  GVQPTGN-LHLGNYLGAIKRFVEMQARDAQCLYCVVDLHAITMWQDPEALKGQIREVTAA 69

Query: 98  EIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFE 157
            +   I+  + I  +  +       A + N                +     +NRM  F+
Sbjct: 70  FLAAGIDPKRSIVFNQSQVPQHAELAWIFN---------------CVARLGWLNRMTQFK 114

Query: 158 SVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK 217
               + +   S+   +  Y +L A D +   +     +   G DQ  ++    D+ ++  
Sbjct: 115 DKAGKDRENASIGLYD--YPVLMAADILA-YRATHVPV---GEDQKQHLELTRDIAQKFN 168

Query: 218 T-----------PKLFA-LTSPLLTTA--------SGT-KMGKTLSGAIWLNKEMTSPYN 256
                        + F  +T PL+            GT KM K+             P  
Sbjct: 169 NDFAGSILAHGHGEQFLPITEPLIGGPAARVMSLRDGTKKMSKS------------DPSE 216

Query: 257 FWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAK---KIIATEITTMVHGR 313
            +      DDAD +                      +++ +AK   + + +E+  +  GR
Sbjct: 217 -YSRIALTDDADAI---------------------AQKVRKAKTDPEPLPSEVAGLA-GR 253

Query: 314 EEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLK 373
            EA+             I    +          S    L+ L V+   A   +E +R + 
Sbjct: 254 PEADNLVGIFAAL--RGITRDEVLADFGGAQFSSFKPALVDLAVET-LAPIGSEMKRLVA 310

Query: 374 SNAIKIN 380
             A  I+
Sbjct: 311 DPA-YID 316


>gi|148227956|ref|NP_001080533.1| tryptophanyl-tRNA synthetase [Xenopus laevis]
 gi|28302309|gb|AAH46713.1| Wars-prov protein [Xenopus laevis]
          Length = 475

 Score = 43.3 bits (101), Expect = 0.080,   Method: Composition-based stats.
 Identities = 48/335 (14%), Positives = 104/335 (31%), Gaps = 49/335 (14%)

Query: 15  RGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +  + LD    +     Y G   ++ ++H GHL   +   WLQ+  + P+ +
Sbjct: 139 RGIFFSHRDMHQVLDAYEKKKPFYLYTGRGPSSEAMHVGHLIPFIFTKWLQEVFNVPLVV 198

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                         D+ + + +   +++  +         I  G       + ++  ++ 
Sbjct: 199 -----------QLTDDEKYLWKDLTLEKAYQYATENAKDIIACGFDVNKTFIFSDLEYMG 247

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA--------YDFV 185
                       +   V + ++F  V+       S    + ++  +QA         +  
Sbjct: 248 KSSGF-----YQNVVKVQKHVTFNQVKGIFGFTDSDCIGKISFPAIQAAPSFSSSFPEIF 302

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKL---FALTSPLLTTASGTKMGKTLS 242
           +  K+  C +     DQ        D+  R+  PK     +   P L  A  TKM  +  
Sbjct: 303 KGRKDIQCLIPC-AIDQDPYFRMTRDVAPRINYPKPALMHSTFFPALQGAQ-TKMSASDP 360

Query: 243 G-AIWLNKE----------------MTSPYNFWQYWRNIDDADVVSFAKRL--TTLPMSE 283
             +I+L                     +     Q+  N +      +          + +
Sbjct: 361 NSSIFLTDTAKQIKSKINKHAFSGGKDTIEEHRQFGGNWEVDVSYMYLTFFLEDDERLEQ 420

Query: 284 IDRMAKLQGKEINEAKKIIATEITTMVHGREEAEK 318
           I +          + KKI+   +  M+   +E  K
Sbjct: 421 IKQDYSSGALLTGDLKKILTETLQPMISAHQERRK 455


>gi|253581901|ref|ZP_04859125.1| tryptophanyl-tRNA synthetase [Fusobacterium varium ATCC 27725]
 gi|251836250|gb|EES64787.1| tryptophanyl-tRNA synthetase [Fusobacterium varium ATCC 27725]
          Length = 328

 Score = 43.3 bits (101), Expect = 0.081,   Method: Composition-based stats.
 Identities = 21/100 (21%), Positives = 32/100 (32%), Gaps = 18/100 (18%)

Query: 156 FESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER 215
            + +         L      Y +L A D +     YD  +   G DQ  ++    D+  +
Sbjct: 111 KDKIAKGFTPNAGL----MTYPVLMAADILI----YDTDVVPVGKDQKQHLEMTRDIAMK 162

Query: 216 LKTP---KLFALTSPLLT-------TASGTKMGKTLSGAI 245
                   LF L  PL+           G KM K+    I
Sbjct: 163 FNQQYGVDLFKLPDPLIMDDLAVIPGTDGQKMSKSYGNTI 202


>gi|154491797|ref|ZP_02031423.1| hypothetical protein PARMER_01414 [Parabacteroides merdae ATCC
           43184]
 gi|154088038|gb|EDN87083.1| hypothetical protein PARMER_01414 [Parabacteroides merdae ATCC
           43184]
          Length = 249

 Score = 43.3 bits (101), Expect = 0.081,   Method: Composition-based stats.
 Identities = 11/52 (21%), Positives = 23/52 (44%), Gaps = 1/52 (1%)

Query: 344 DEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
            + +  + L   +  AG   S  EA   ++   +++N  I++    +I  QD
Sbjct: 8   ADPNEPIRLNKFLSNAGVC-SRREADEFIQEGVVQVNGQIVTELGTKITRQD 58


>gi|294012129|ref|YP_003545589.1| ribosomal large subunit pseudouridine synthase B [Sphingobium
           japonicum UT26S]
 gi|292675459|dbj|BAI96977.1| ribosomal large subunit pseudouridine synthase B [Sphingobium
           japonicum UT26S]
          Length = 304

 Score = 43.3 bits (101), Expect = 0.082,   Method: Composition-based stats.
 Identities = 9/46 (19%), Positives = 18/46 (39%), Gaps = 1/46 (2%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
           +    +  L+ +AG   S  E  R ++   I +N   +S     + 
Sbjct: 63  NEPQRIAKLLARAG-VASRREVERMIEEGRITLNGEAVSTPATLLS 107


>gi|150399382|ref|YP_001323149.1| 30S ribosomal protein S4P [Methanococcus vannielii SB]
 gi|171460838|sp|A6UPW5|RS4_METVS RecName: Full=30S ribosomal protein S4P
 gi|150012085|gb|ABR54537.1| ribosomal protein S4 [Methanococcus vannielii SB]
          Length = 178

 Score = 43.3 bits (101), Expect = 0.082,   Method: Composition-based stats.
 Identities = 17/118 (14%), Positives = 45/118 (38%), Gaps = 8/118 (6%)

Query: 288 AKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVS 347
            + Q +      + + ++ TT        ++A          +I  +  PT+        
Sbjct: 44  METQLRNYRRQARKLISDTTTQ-----GGKEAVQLFNVLKRYAILVEQEPTLDHILSLNI 98

Query: 348 RGM---GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNI 402
             +    L TL+ + G A +  +AR+ +    I +N   +++    + + + ++ G +
Sbjct: 99  ESILERRLQTLVYRKGLAKTAKQARQLIVHGHIAVNGRRVTSPSYLVSVSENNAIGYV 156


>gi|262281284|ref|ZP_06059066.1| tryptophanyl-tRNA synthetase [Acinetobacter calcoaceticus RUH2202]
 gi|262257515|gb|EEY76251.1| tryptophanyl-tRNA synthetase [Acinetobacter calcoaceticus RUH2202]
          Length = 337

 Score = 43.3 bits (101), Expect = 0.083,   Method: Composition-based stats.
 Identities = 46/261 (17%), Positives = 77/261 (29%), Gaps = 45/261 (17%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
            T   LH GH    +      +  H    L+    ++  +    D+ RR      I E  
Sbjct: 16  PTGQ-LHLGHFVGSLRSRVGLQDSHHQHLLLADAQALTDNADNPDKVRR-----NILEVA 69

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR- 162
                +          KT   + +    L  +  +  L  +              ++ R 
Sbjct: 70  LDYLAVG-----IDPTKTTICVQSCLPALNELTML-YLNFVTVARLERNPTIKSEIQMRG 123

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT---- 218
            +R+    FL   Y + QA D       +   +   G DQ   I    ++  R+      
Sbjct: 124 FERDIPAGFL--CYPVAQAADITA----FKATVVPVGEDQIPMIEQTNEIVRRINRQIGQ 177

Query: 219 ---PKLFALTSPL--LTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSF 272
              P+  AL S +  L    G  KM K+L   I                 N  D D+   
Sbjct: 178 DLLPECKALLSNMARLPGFDGKAKMSKSLGNTI---------------VLNASDKDIKKA 222

Query: 273 AK-RLTTLPMSEIDRMAKLQG 292
                T      I+   +++G
Sbjct: 223 VNAMYTDPNHLRIEDPGQVEG 243


>gi|239979875|ref|ZP_04702399.1| tryptophanyl-tRNA synthetase [Streptomyces albus J1074]
          Length = 330

 Score = 43.3 bits (101), Expect = 0.083,   Method: Composition-based stats.
 Identities = 51/335 (15%), Positives = 99/335 (29%), Gaps = 55/335 (16%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   TA S H G+    +  +   +  H    ++    + I  P    E R         
Sbjct: 4   GIQPTAGSFHLGNYLGAVRQWVALQETHDAFYMVVDLHA-ITVPQDPAELR--------- 53

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLS-FESV 159
               ++             +    + +       + +  ++  +  F   +RM    +  
Sbjct: 54  -ANTRLAAAQLLAAGLDPERCTLFVQSQVPEHAQLGW--VMNCLTGFGEASRMTQFKDKS 110

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT- 218
             +     ++    F Y +L   D + L +     +   G DQ  ++     L ER    
Sbjct: 111 AKQGNDRTTVGL--FTYPMLMVADIL-LYQADQVPV---GEDQRQHLELTRTLAERFNGT 164

Query: 219 -------PKLFAL--TSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRN-IDD- 266
                  P  + L  T+ +      T KM K+ +    L   +  P    +  ++ + D 
Sbjct: 165 YGETFTVPGAYILKETAKIYDLQDPTAKMSKSAANPKGLINLLDEPKATMKKIKSAVTDT 224

Query: 267 -----------ADVVSFAKRLTTLPMSEIDRMAKL-QGKEINEAKKIIAT---------- 304
                      A V +    L+TL    I  + +   GK     K  +A           
Sbjct: 225 GSEIRFDRAEKAGVSNLLSILSTLSGVTIAELEEKYTGKGYGALKTDLAEVMVDFVTPFR 284

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI 339
           E T       E   A  AA      ++ ++ +   
Sbjct: 285 ERTQAYLDDPETLDAILAAGAEKARAVAAETLAQT 319


>gi|325299964|ref|YP_004259881.1| tryptophanyl-tRNA synthetase [Bacteroides salanitronis DSM 18170]
 gi|324319517|gb|ADY37408.1| tryptophanyl-tRNA synthetase [Bacteroides salanitronis DSM 18170]
          Length = 363

 Score = 43.3 bits (101), Expect = 0.083,   Method: Composition-based stats.
 Identities = 62/368 (16%), Positives = 105/368 (28%), Gaps = 74/368 (20%)

Query: 44  LTASSLHAGHLTQLMLLFW---LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH      L     LQ +G      +          +  +  +      E+ 
Sbjct: 13  PTGK-LHIGHYVG--SLRRRVELQNSGLYDKIFVFEADGQALTDNIDNPEKIRQNVIEVA 69

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
            +   +             K+   + +    LC + +  +     S    N  +  E   
Sbjct: 70  LDYLSVG--------LDPAKSTIFIQSQIPELCELTFYYMDLVTVSRLQRNPTVKTEIQM 121

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQ------------WGNIIC 208
              +    + F  F Y I QA D           + +G  DQ              N I 
Sbjct: 122 RNFETSIPVGF--FVYPISQAADITAFKA---TTVPVG-EDQEPMLEQAREIVRRFNYIY 175

Query: 209 GIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPY----NFWQ--YWR 262
           G  L E        A    L  T    KM K+L   I+L+           + +      
Sbjct: 176 GETLVEPEILLPDNAACLRLPGTDGKAKMSKSLGNCIYLSDPADEVEKKVRSMYTDPTHI 235

Query: 263 NIDD------ADVVSFA----------KRLTTLP-MSEIDRMAKLQGKEINEAKKIIATE 305
            + D        V ++           + L   P + E+       G    + KK +A  
Sbjct: 236 KVSDPGKLEGNTVFTYLDAFCRPEHFGRYLPDYPNLDELKAHYTRGGLGDVKVKKFLAAI 295

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATST 365
           +      +EE E                + +P I    D + +G     +  +A  A + 
Sbjct: 296 M------QEELEPIRE------RRKAFEKDIPAI---YDMLKKG---CEVAREA-AAQTL 336

Query: 366 NEARRHLK 373
           +E RR +K
Sbjct: 337 SEVRRAMK 344


>gi|294672844|ref|YP_003573460.1| ribosomal large subunit pseudouridine synthase B [Prevotella
           ruminicola 23]
 gi|294472710|gb|ADE82099.1| ribosomal large subunit pseudouridine synthase B [Prevotella
           ruminicola 23]
          Length = 449

 Score = 43.3 bits (101), Expect = 0.083,   Method: Composition-based stats.
 Identities = 12/71 (16%), Positives = 31/71 (43%), Gaps = 1/71 (1%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           + +  + L   +  AG   S  EA   +++  + +N  I++    +I   D     +  +
Sbjct: 209 DPNEPLRLNKFLANAGVC-SRREADEFIQAGVVSVNGEIVTELGTKILRTDVVKFHDQPV 267

Query: 405 SFGKKNHIICH 415
           +  KK +++ +
Sbjct: 268 NIEKKVYVLLN 278


>gi|254393466|ref|ZP_05008605.1| tryptophanyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|197707092|gb|EDY52904.1| tryptophanyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
          Length = 344

 Score = 43.3 bits (101), Expect = 0.083,   Method: Composition-based stats.
 Identities = 48/296 (16%), Positives = 93/296 (31%), Gaps = 45/296 (15%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   TA S H G+    +  +   +  H    ++    + I  P    E R         
Sbjct: 18  GIQPTAGSFHLGNYLGAIRQYVALQETHDAFYMVVDLHA-ITVPQDPAELR--------- 67

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLS-FESV 159
               ++             +    + ++      + +  ++  +  F   +RM    +  
Sbjct: 68  -ANTRLAAAQLLAAGLDPDRCTLFIQSHVPEHAQLGW--VMNCLTGFGEASRMTQFKDKS 124

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT- 218
             +     ++    F Y +LQ  D + L +     +   G DQ  +I    DL ER  T 
Sbjct: 125 AKQGADRATVGL--FTYPVLQVADIL-LYQADAVPV---GEDQRQHIELTRDLAERFNTR 178

Query: 219 -PKLFALTSP--------LLTTAS-GTKMGKTLSGAIWLNKEMTSPYNFWQYWRN-IDDA 267
               F++ +P        +        KM K+ S    L   +  P    +  ++ + D 
Sbjct: 179 FGDTFSVPAPHIVKEVAKIYDLQDPAVKMSKSASTPKGLINLLDEPKATAKKVKSAVTDT 238

Query: 268 D------------VVSFAKRLTTLPMSEIDRMAKL-QGKEINEAKKIIATEITTMV 310
           D            V +     +TL    +  + K  +GK     K  +A  +   V
Sbjct: 239 DTVIRFDPVEKPGVSNLLTIYSTLTGRTVAELEKEYEGKMYGALKTDLAEVMVEFV 294


>gi|70732410|ref|YP_262166.1| tryptophanyl-tRNA synthetase [Pseudomonas fluorescens Pf-5]
 gi|68346709|gb|AAY94315.1| tryptophanyl-tRNA synthetase [Pseudomonas fluorescens Pf-5]
          Length = 451

 Score = 43.3 bits (101), Expect = 0.083,   Method: Composition-based stats.
 Identities = 21/95 (22%), Positives = 36/95 (37%), Gaps = 18/95 (18%)

Query: 166 EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL----KTPKL 221
           +  ++   ++Y +L A D + +   +   +   G DQ  ++    D+G+R        K 
Sbjct: 128 DAGITMGLYSYPVLMAADIL-MFNAHKVPV---GRDQIQHVEMARDIGQRFNHLFGQGKE 183

Query: 222 FALTSP---------LLTTASGTKMGKTLSGAIWL 247
           F  T P          L    G KM K+    I L
Sbjct: 184 F-FTMPEALIEESVATLPGLDGRKMSKSYDNTIPL 217


>gi|119025045|ref|YP_908890.1| tryptophanyl-tRNA synthetase [Bifidobacterium adolescentis ATCC
           15703]
 gi|118764629|dbj|BAF38808.1| tryptophanyl-tRNA synthetase [Bifidobacterium adolescentis ATCC
           15703]
          Length = 366

 Score = 43.3 bits (101), Expect = 0.083,   Method: Composition-based stats.
 Identities = 44/303 (14%), Positives = 89/303 (29%), Gaps = 49/303 (16%)

Query: 22  SNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSI 80
           S+     I  + G  T   G   T   LH GH    +     +Q  G     ++      
Sbjct: 28  SDETLAAIEKNPGKFTMLTGDRPTGR-LHMGHYFGTLRSRVEMQNKGVHTNIIIADY--- 83

Query: 81  IGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY----GTGKTDALMLNNETWLCSIK 136
                      +++  ++  E+I+    + +  + Y       +   +  ++     +  
Sbjct: 84  -----------QVITDRDTTEHIQ--DNVLNLILDYMAAGIDPEKTMIYTHSSVPAENQL 130

Query: 137 YIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQ 196
            +  L  +              +        +L+ L   Y + QA D   L    +    
Sbjct: 131 MLPFLSLVTESELHRNPTVKAEME---ASGHALTGLLLTYPVHQACD--ILFCKGNIV-- 183

Query: 197 MGGSDQWGNIICGIDLGERLKT-----------PKLFALTSPLLTTASGTKMGKTLSGAI 245
             G DQ  +I     +  R              P      +P +      KM K+   +I
Sbjct: 184 PVGKDQLPHIELTRTIARRFNERYAKKNPVFPEPDAILSDAPEIPGLDDQKMSKSRGNSI 243

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPM--SEIDRMAKLQGKEINEAKKIIA 303
            L+          +   +  D++     +++T  P+   E+  +            K IA
Sbjct: 244 MLSATAAETAKLIKK--SRTDSE-----RKITFDPINRPEVSALLTTAALTTGRDPKEIA 296

Query: 304 TEI 306
            EI
Sbjct: 297 EEI 299


>gi|254558807|ref|YP_003065902.1| Tryptophanyl tRNA synthetase [Methylobacterium extorquens DM4]
 gi|254266085|emb|CAX21837.1| Tryptophanyl tRNA synthetase [Methylobacterium extorquens DM4]
          Length = 353

 Score = 43.3 bits (101), Expect = 0.084,   Method: Composition-based stats.
 Identities = 57/367 (15%), Positives = 112/367 (30%), Gaps = 88/367 (23%)

Query: 41  GYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTS--IIGDPSFRDESRRMMRSQ 97
           G   T + LH G+    +     +Q    + +  +    +  +  DP       R + + 
Sbjct: 11  GVQPTGN-LHLGNYLGAIKRFVEMQARDAQCLYCVVDLHAITMWQDPEALKGQIREVTAA 69

Query: 98  EIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFE 157
            +   I+  + I  +  +       A + N                +     +NRM  F+
Sbjct: 70  FLAAGIDPKRSIVFNQSQVPQHAELAWIFN---------------CVARLGWLNRMTQFK 114

Query: 158 SVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK 217
               + +   S+   +  Y +L A D +   +     +   G DQ  ++    D+ ++  
Sbjct: 115 DKAGKDRENASIGLYD--YPVLMAADILA-YRATHVPV---GEDQKQHLELTRDIAQKFN 168

Query: 218 ------------TPKLFALTSPLLTTA--------SGT-KMGKTLSGAIWLNKEMTSPYN 256
                         + F +T PL+            GT KM K+             P  
Sbjct: 169 NDFAGSILAHGHGEQFFPITEPLIGGPAARVMSLRDGTKKMSKS------------DPSE 216

Query: 257 FWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAK---KIIATEITTMVHGR 313
            +      DDAD +                      +++ +AK   + + +E+  +  GR
Sbjct: 217 -YSRIALTDDADAI---------------------AQKVRKAKTDPEPLPSEVAGLA-GR 253

Query: 314 EEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLK 373
            EA+             I    +          S    L+ L V+   A    E +R + 
Sbjct: 254 PEADNLVGIFAAL--RGITRDEVLADFGGAQFSSFKPALVDLAVET-LAPIGAEMKRLVA 310

Query: 374 SNAIKIN 380
             A  I+
Sbjct: 311 DPA-YID 316


>gi|229084572|ref|ZP_04216842.1| Pseudouridine synthase [Bacillus cereus Rock3-44]
 gi|228698722|gb|EEL51437.1| Pseudouridine synthase [Bacillus cereus Rock3-44]
          Length = 242

 Score = 43.3 bits (101), Expect = 0.084,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 26/53 (49%), Gaps = 1/53 (1%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           L  +I +AG A S  +A   ++   +K+N  +++    ++  QD     NI L
Sbjct: 4   LQKVIAQAGIA-SRRKAEELIQQGKVKVNGKVVTELGTKVTPQDKVEVNNIPL 55


>gi|321258552|ref|XP_003193997.1| tryptophan-tRNA ligase [Cryptococcus gattii WM276]
 gi|317460467|gb|ADV22210.1| tryptophan-tRNA ligase, putative [Cryptococcus gattii WM276]
          Length = 641

 Score = 43.3 bits (101), Expect = 0.085,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 26/63 (41%), Gaps = 1/63 (1%)

Query: 12  LSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           L  RG  +   +    LD          Y G   ++ S+H GHL   M   +LQ+  + P
Sbjct: 264 LLRRGTFYSHRDFNLILDRYEKGQPFYLYTGRGPSSDSMHMGHLVPFMFTAYLQRVFNVP 323

Query: 71  ISL 73
           + +
Sbjct: 324 LVI 326


>gi|158424014|ref|YP_001525306.1| pseudouridine synthase [Azorhizobium caulinodans ORS 571]
 gi|158330903|dbj|BAF88388.1| pseudouridine synthase [Azorhizobium caulinodans ORS 571]
          Length = 717

 Score = 43.3 bits (101), Expect = 0.085,   Method: Composition-based stats.
 Identities = 7/56 (12%), Positives = 21/56 (37%), Gaps = 1/56 (1%)

Query: 340 SISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
            +          +  +I +AG   S  E    + +  + +N  ++++    +  +D
Sbjct: 20  ELPAAAPKEAERIAKVIARAGL-GSRREIEEWITAGRVSVNGEVLASPAFTVTAED 74


>gi|58259771|ref|XP_567298.1| tryptophan-tRNA ligase [Cryptococcus neoformans var. neoformans
           JEC21]
 gi|134116718|ref|XP_773031.1| hypothetical protein CNBJ3070 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50255651|gb|EAL18384.1| hypothetical protein CNBJ3070 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57229348|gb|AAW45781.1| tryptophan-tRNA ligase, putative [Cryptococcus neoformans var.
           neoformans JEC21]
          Length = 641

 Score = 43.3 bits (101), Expect = 0.085,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 26/63 (41%), Gaps = 1/63 (1%)

Query: 12  LSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           L  RG  +   +    LD          Y G   ++ S+H GHL   M   +LQ+  + P
Sbjct: 264 LLRRGTFYSHRDFNLILDRYEKGQPFYLYTGRGPSSDSMHMGHLVPFMFTAYLQRVFNVP 323

Query: 71  ISL 73
           + +
Sbjct: 324 LVI 326


>gi|228990582|ref|ZP_04150547.1| Pseudouridine synthase [Bacillus pseudomycoides DSM 12442]
 gi|228996683|ref|ZP_04156320.1| Pseudouridine synthase [Bacillus mycoides Rock3-17]
 gi|229004333|ref|ZP_04162121.1| Pseudouridine synthase [Bacillus mycoides Rock1-4]
 gi|228756916|gb|EEM06173.1| Pseudouridine synthase [Bacillus mycoides Rock1-4]
 gi|228763002|gb|EEM11912.1| Pseudouridine synthase [Bacillus mycoides Rock3-17]
 gi|228769108|gb|EEM17706.1| Pseudouridine synthase [Bacillus pseudomycoides DSM 12442]
          Length = 244

 Score = 42.9 bits (100), Expect = 0.085,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 26/53 (49%), Gaps = 1/53 (1%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           L  +I +AG A S  +A   ++   +K+N  +++    ++  QD     NI L
Sbjct: 6   LQKVIAQAGIA-SRRKAEELIQQGKVKVNGKVVTELGTKVTPQDKVEVNNIPL 57


>gi|206901924|ref|YP_002251178.1| tryptophanyl-tRNA synthetase [Dictyoglomus thermophilum H-6-12]
 gi|206741027|gb|ACI20085.1| tryptophanyl-tRNA synthetase [Dictyoglomus thermophilum H-6-12]
          Length = 329

 Score = 42.9 bits (100), Expect = 0.085,   Method: Composition-based stats.
 Identities = 29/155 (18%), Positives = 50/155 (32%), Gaps = 24/155 (15%)

Query: 176 YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-------TPKLFALT-SP 227
           Y +LQA D + + +     +   G DQ  ++    ++  R               L+  P
Sbjct: 131 YPVLQAADIL-IYRADTVPV---GEDQLPHLELTREIARRFNYFYSPIFPEPQAKLSEVP 186

Query: 228 LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYW------RNIDDA------DVVSFAKR 275
            L    G KM K+    I L+ E        +            D        V ++ K 
Sbjct: 187 ELVGIDGRKMSKSYGNTIPLDTEEEELKKLVRSMITDPARIRRSDPGHPEVCTVFAYHKI 246

Query: 276 LTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMV 310
                +SEID   +       E K  +A ++   +
Sbjct: 247 FNKEEVSEIDYACRNAQIGCVECKMKLAEKLNQFL 281


>gi|228934638|ref|ZP_04097472.1| Tryptophanyl-tRNA synthetase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228825031|gb|EEM70829.1| Tryptophanyl-tRNA synthetase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
          Length = 327

 Score = 42.9 bits (100), Expect = 0.086,   Method: Composition-based stats.
 Identities = 22/96 (22%), Positives = 34/96 (35%), Gaps = 17/96 (17%)

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLF 222
           L+ +  ++   + Y IL A D + L +     +   G DQ  +I    D+         F
Sbjct: 118 LEVDAGVNMGLYTYPILMAADIL-LFQATHVPV---GKDQIQHIEIARDIATYFN--HTF 171

Query: 223 ALTSPL-----------LTTASGTKMGKTLSGAIWL 247
            +T  L           L    G KM K+    I L
Sbjct: 172 GMTFTLPEYVIQEEGAILPGLDGRKMSKSYGNVIPL 207


>gi|229179630|ref|ZP_04306981.1| hypothetical protein bcere0005_29780 [Bacillus cereus 172560W]
 gi|228603833|gb|EEK61303.1| hypothetical protein bcere0005_29780 [Bacillus cereus 172560W]
          Length = 345

 Score = 42.9 bits (100), Expect = 0.086,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 47/159 (29%), Gaps = 25/159 (15%)

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLF 222
           L+ +  ++   + Y IL A D + L +     +   G DQ  +I    D+         F
Sbjct: 136 LEVDAGVNMGLYTYPILMAADIL-LFQATHVPV---GKDQIQHIEIARDIATYFN--HTF 189

Query: 223 ALTSPL-----------LTTASGTKMGKTLSGAIWL--NKEMTSPYNFWQYWRNIDDADV 269
             T  L           L    G KM K+    I L   +E      F     +    + 
Sbjct: 190 GTTFTLPEYVIQEEGAILPGLDGRKMSKSYGNVIPLFAEQEKLRKLIFKIKTDSSLPNEP 249

Query: 270 VSFAKRLT----TLPMSEID--RMAKLQGKEINEAKKII 302
                  T         EI   R     G    + KK +
Sbjct: 250 KELETLFTIYKEFATEDEIQSLREKYETGIGWGDVKKEL 288


>gi|218280995|ref|ZP_03487585.1| hypothetical protein EUBIFOR_00143 [Eubacterium biforme DSM 3989]
 gi|218217766|gb|EEC91304.1| hypothetical protein EUBIFOR_00143 [Eubacterium biforme DSM 3989]
          Length = 352

 Score = 42.9 bits (100), Expect = 0.086,   Method: Composition-based stats.
 Identities = 41/242 (16%), Positives = 68/242 (28%), Gaps = 38/242 (15%)

Query: 44  LTASSLHAGHLTQ-LMLLFWLQKTGH--KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    L     LQ +G   +   ++    ++  +    D+ R     + I 
Sbjct: 11  PTGK-LHIGHYVGSLRNRVLLQNSGEYDEIYIMIADAQALTDNFDNPDKVR-----ENIL 64

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           E                  KT   + +  + L  + +   +  +              ++
Sbjct: 65  EVALDYLACG-----IDPSKTTIFIQSEISQLTELTFY-YMNLVSVSRLQRNPTVKAEIK 118

Query: 161 SR-LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQ------------WGNII 207
            R       + F    Y I QA D           +  G  DQ              N I
Sbjct: 119 MRGFDASIPVGFQ--CYPISQAADITAFKA---TTVPAG-EDQMPMIEQTQEIVHKFNSI 172

Query: 208 CGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNI-DD 266
            G  L E             L  T    KM K+L   I+L+ +        +   ++  D
Sbjct: 173 YGETLVEPKILLPQNDACLRLPGTDGKAKMSKSLGNCIYLSDDE---ETIKKKVMSMYTD 229

Query: 267 AD 268
            D
Sbjct: 230 PD 231


>gi|27806353|ref|NP_776643.1| tryptophanyl-tRNA synthetase, cytoplasmic [Bos taurus]
 gi|825|emb|CAA37872.1| tryptophan-tRNA ligase [Bos taurus]
          Length = 475

 Score = 42.9 bits (100), Expect = 0.086,   Method: Composition-based stats.
 Identities = 39/248 (15%), Positives = 83/248 (33%), Gaps = 32/248 (12%)

Query: 15  RGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +  + LD   ++     Y G   ++ ++H GHL   +   WLQ   + P+ +
Sbjct: 139 RGIFFSHRDMHQILDAYENKKPFYLYTGRGPSSEAMHVGHLIPFIFTKWLQDVFNVPLVI 198

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                         D+  + +      +         +  I  G       + ++  ++ 
Sbjct: 199 -----------QMTDDE-KYLWKDLTLDQAYGYAVENAKDITCGFDINKTFIFSDLDYMG 246

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA-----YDFVELA 188
                   + +     + + ++F  V+       S    + ++  +QA       F ++ 
Sbjct: 247 --MSPGFYKNV---VKIQKHVTFNQVKGIFGFTDSDCIGKISFPAIQAAPSFSNSFPQIF 301

Query: 189 KNY---DCRLQMGGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTASGTKMGKTLS 242
           ++     C +     DQ        D+  R+  PK   L +   P L  A  TKM  +  
Sbjct: 302 RDRTDVQCLIPC-AIDQDPYFRMTRDVAPRIGYPKPALLHSTFFPALQGAQ-TKMSASDP 359

Query: 243 G-AIWLNK 249
             +I+L  
Sbjct: 360 NSSIFLTD 367


>gi|260943091|ref|XP_002615844.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
 gi|238851134|gb|EEQ40598.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
          Length = 426

 Score = 42.9 bits (100), Expect = 0.087,   Method: Composition-based stats.
 Identities = 21/129 (16%), Positives = 47/129 (36%), Gaps = 11/129 (8%)

Query: 15  RGFIHQISNP-RELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +  R LD+         Y G   ++ S+H GH+   +   WLQ     P+ +
Sbjct: 77  RGVFFSERDLHRILDLYEHGEPFFLYTGRGPSSDSMHLGHMVPFIFTKWLQDVFDVPLVI 136

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                 +  D  F  +  + +  + ++   +         I  G    +  + ++  ++ 
Sbjct: 137 -----ELTDDEKFLFK--QKLTIENVKTFAK---ENSKDIIAVGFKPENTFIFSDLEFMN 186

Query: 134 SIKYIDLLR 142
              Y +++R
Sbjct: 187 PALYENVVR 195


>gi|228953627|ref|ZP_04115668.1| hypothetical protein bthur0006_30040 [Bacillus thuringiensis
           serovar kurstaki str. T03a001]
 gi|228806052|gb|EEM52630.1| hypothetical protein bthur0006_30040 [Bacillus thuringiensis
           serovar kurstaki str. T03a001]
          Length = 345

 Score = 42.9 bits (100), Expect = 0.087,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 47/159 (29%), Gaps = 25/159 (15%)

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLF 222
           L+ +  ++   + Y IL A D + L +     +   G DQ  +I    D+         F
Sbjct: 136 LEVDAGVNMGLYTYPILMAADIL-LFQATHVPV---GKDQIQHIEIARDIATYFN--HTF 189

Query: 223 ALTSPL-----------LTTASGTKMGKTLSGAIWL--NKEMTSPYNFWQYWRNIDDADV 269
             T  L           L    G KM K+    I L   +E      F     +    + 
Sbjct: 190 GTTFTLPEYVIQEEGAILPGLDGRKMSKSYGNVIPLFAEQEKLRKLIFKIKTDSSLPNEP 249

Query: 270 VSFAKRLT----TLPMSEID--RMAKLQGKEINEAKKII 302
                  T         EI   R     G    + KK +
Sbjct: 250 KELETLFTIYKEFATEDEIQSLREKYETGIGWGDVKKEL 288


>gi|160894187|ref|ZP_02074965.1| hypothetical protein CLOL250_01741 [Clostridium sp. L2-50]
 gi|156864220|gb|EDO57651.1| hypothetical protein CLOL250_01741 [Clostridium sp. L2-50]
          Length = 356

 Score = 42.9 bits (100), Expect = 0.087,   Method: Composition-based stats.
 Identities = 37/236 (15%), Positives = 74/236 (31%), Gaps = 35/236 (14%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGH--KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +     LQ +G+  +   ++    ++  +    ++ R+ +    + 
Sbjct: 11  PTGR-LHVGHYVGSLSERVKLQNSGNYDEIYIMIADAQALTDNAEHPEKVRQNIIQVALD 69

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
                I             K+   + +    L  + +  +     S    N  +  E   
Sbjct: 70  YLACGI----------DPEKSTIFIQSMVPELTELSFYYMNLVTVSRVQRNPTVKSEIKM 119

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
              +    + F  F Y I QA D     +  +  +   G DQ   +    ++  +  +  
Sbjct: 120 RNFEASIPVGF--FCYPISQAADITA-FRATEVPV---GEDQLPMLEQCKEIVHKFNSVY 173

Query: 221 LFALTSP-----------LLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNI 264
              LT P            L    G  KM K+L   I+L+ E        +   ++
Sbjct: 174 GETLTDPEIVLPSNKACLRLPGIDGKAKMSKSLGNCIYLSDEAD---EVKKKVMSM 226


>gi|229174025|ref|ZP_04301561.1| hypothetical protein bcere0006_31190 [Bacillus cereus MM3]
 gi|228609357|gb|EEK66643.1| hypothetical protein bcere0006_31190 [Bacillus cereus MM3]
          Length = 345

 Score = 42.9 bits (100), Expect = 0.087,   Method: Composition-based stats.
 Identities = 22/96 (22%), Positives = 34/96 (35%), Gaps = 17/96 (17%)

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLF 222
           L+ +  ++   + Y IL A D + L +     +   G DQ  +I    D+         F
Sbjct: 136 LEVDAGVNMGLYTYPILMAADIL-LFQATHVPV---GKDQIQHIEIARDIATYFN--HTF 189

Query: 223 ALTSPL-----------LTTASGTKMGKTLSGAIWL 247
            +T  L           L    G KM K+    I L
Sbjct: 190 GMTFTLPEYVIQEEGAILPGLDGRKMSKSYGNVIPL 225


>gi|330828676|ref|YP_004391628.1| Tryptophanyl-tRNA synthetase [Aeromonas veronii B565]
 gi|328803812|gb|AEB49011.1| Tryptophanyl-tRNA synthetase [Aeromonas veronii B565]
          Length = 334

 Score = 42.9 bits (100), Expect = 0.088,   Method: Composition-based stats.
 Identities = 38/232 (16%), Positives = 72/232 (31%), Gaps = 52/232 (22%)

Query: 140 LLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGG 199
           +L        ++RM  F+   +R +   ++    F Y +L A D + L +     +   G
Sbjct: 94  ILNCYTQMGELSRMTQFKDKSARFENNVNVGL--FGYPVLMAADIL-LYQANQVPV---G 147

Query: 200 SDQWGNIICGIDLGERLKT--PKLFALTSPLLTTASG---------TKMGKTLSGAIWLN 248
           +DQ  ++    D+  R       +F +  P + T             KM K+        
Sbjct: 148 NDQKQHLELTRDICTRFNNLYGDVFTMPEPFIPTEGARVMSLQDPTKKMSKSDDNEANFI 207

Query: 249 KEMTSPYNFWQYW-RNIDDAD--------------VVSFAKRLTTLPMSEIDRMA-KLQG 292
             +  P    +   R + D+D              V +    ++ +    I  +    +G
Sbjct: 208 GLLEDPKQIVKKIKRAVTDSDEPAVVRFDPENKPGVSNLLTLMSGVTGRSIPELELHFEG 267

Query: 293 KEINEAKKIIATEITTM-------VHG------------REEAEKAATAAME 325
           K     K   A  +  +        H              E A+KA   A +
Sbjct: 268 KMYGHLKTETAEAVVALLEPIQARFHELRQDEAHLIAILAEGAQKARERAEK 319


>gi|315607439|ref|ZP_07882435.1| ribosomal large subunit pseudouridine synthase B [Prevotella buccae
           ATCC 33574]
 gi|315250871|gb|EFU30864.1| ribosomal large subunit pseudouridine synthase B [Prevotella buccae
           ATCC 33574]
          Length = 492

 Score = 42.9 bits (100), Expect = 0.088,   Method: Composition-based stats.
 Identities = 12/78 (15%), Positives = 32/78 (41%), Gaps = 1/78 (1%)

Query: 338 TISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
             S    + +  + L   +  AG   S  EA   +++  + +N  +++    ++   D  
Sbjct: 245 EYSEENIDPNEPIRLNKYLANAGVC-SRREADEFIQAGVVTVNGEVVTELGTKVLRTDEV 303

Query: 398 STGNIKLSFGKKNHIICH 415
              +  +S  KK +++ +
Sbjct: 304 KFHDNPVSLEKKVYVLLN 321


>gi|290999675|ref|XP_002682405.1| tryptophanyl-tRNA synthetase [Naegleria gruberi]
 gi|284096032|gb|EFC49661.1| tryptophanyl-tRNA synthetase [Naegleria gruberi]
          Length = 434

 Score = 42.9 bits (100), Expect = 0.088,   Method: Composition-based stats.
 Identities = 22/122 (18%), Positives = 42/122 (34%), Gaps = 12/122 (9%)

Query: 15  RGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +  +L     QG     Y G   ++ S+H GHL   M   +LQ     P+ +
Sbjct: 71  RGIFFSHRDMHKLLDYYEQGKPFYLYTGRGPSSESMHLGHLIPFMFTKYLQDVFDVPLVV 130

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                         D+ + + +  E++E            I  G   +   + +N  ++ 
Sbjct: 131 -----------QMTDDEKFLWKKLELEEAHRLTYENAKDIIACGFDMSKTFIFSNLDYMG 179

Query: 134 SI 135
            +
Sbjct: 180 HL 181


>gi|229156952|ref|ZP_04285033.1| Tryptophanyl-tRNA synthetase [Bacillus cereus ATCC 4342]
 gi|228626442|gb|EEK83188.1| Tryptophanyl-tRNA synthetase [Bacillus cereus ATCC 4342]
          Length = 332

 Score = 42.9 bits (100), Expect = 0.088,   Method: Composition-based stats.
 Identities = 22/96 (22%), Positives = 34/96 (35%), Gaps = 17/96 (17%)

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLF 222
           L+ +  ++   + Y IL A D + L +     +   G DQ  +I    D+         F
Sbjct: 123 LEVDAGVNMGLYTYPILMAADIL-LFQATHVPV---GKDQIQHIEIARDIATYFN--HTF 176

Query: 223 ALTSPL-----------LTTASGTKMGKTLSGAIWL 247
            +T  L           L    G KM K+    I L
Sbjct: 177 GMTFTLPEYVIQEEGAILPGLDGRKMSKSYGNVIPL 212


>gi|227894426|ref|ZP_04012231.1| tryptophan--tRNA ligase [Lactobacillus ultunensis DSM 16047]
 gi|227863796|gb|EEJ71217.1| tryptophan--tRNA ligase [Lactobacillus ultunensis DSM 16047]
          Length = 340

 Score = 42.9 bits (100), Expect = 0.088,   Method: Composition-based stats.
 Identities = 36/225 (16%), Positives = 67/225 (29%), Gaps = 37/225 (16%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     LQ +G + P  ++    ++  +    ++ R  +    +  
Sbjct: 12  PTGK-LHIGHYIGSLKNRVKLQNSGKYDPYIMIADTQALTDNARNPEKIRNSLIQVALDY 70

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
               I             K+   + +    L  +    +     +    N  +  E  + 
Sbjct: 71  LAVGI----------DPSKSTIYVQSQIPALFELTAYYMDLVTVARLERNPTVKTEIKQK 120

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKL 221
             K    + FL  NY + QA D       +   +   G DQ   +    ++         
Sbjct: 121 NFKDSIPVGFL--NYPVSQAADITA----FKATIVPVGDDQEPMLEQTREIVRTFNR--- 171

Query: 222 FALTSPL--------------LTTASGT-KMGKTLSGAIWLNKEM 251
              T  L              L    G  KM K+L   I+L+ + 
Sbjct: 172 VYHTDVLVEPKGYFPPKGQGRLPGLDGNAKMSKSLGNCIYLSDDA 216


>gi|254481341|ref|ZP_05094586.1| tryptophanyl-tRNA synthetase [marine gamma proteobacterium
           HTCC2148]
 gi|214038504|gb|EEB79166.1| tryptophanyl-tRNA synthetase [marine gamma proteobacterium
           HTCC2148]
          Length = 335

 Score = 42.9 bits (100), Expect = 0.088,   Method: Composition-based stats.
 Identities = 20/88 (22%), Positives = 33/88 (37%), Gaps = 13/88 (14%)

Query: 169 LSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPL 228
           ++   F+Y +L A D +    N    + +G  DQ  ++    D+  R         T P+
Sbjct: 130 ITMGLFSYPVLMAADILMFNAN---SIPVG-RDQIQHVEMARDIAGRFNHNFAEVFTLPV 185

Query: 229 ---------LTTASGTKMGKTLSGAIWL 247
                    L    G KM K+ +  I L
Sbjct: 186 AAVDDNVAVLQGLDGRKMSKSYNNTIPL 213


>gi|225552425|ref|ZP_03773365.1| tryptophanyl-tRNA synthetase [Borrelia sp. SV1]
 gi|225371423|gb|EEH00853.1| tryptophanyl-tRNA synthetase [Borrelia sp. SV1]
          Length = 351

 Score = 42.9 bits (100), Expect = 0.088,   Method: Composition-based stats.
 Identities = 31/218 (14%), Positives = 67/218 (30%), Gaps = 28/218 (12%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESR-RMMRSQEIQEN 102
            T + LH GH    ++     +  ++   ++    ++   P  +          + + + 
Sbjct: 12  PTGA-LHLGHYVGSVVNRLKFQEEYETYFIIADLHTLTTKPDLKSIGTIPSNVREMVLDY 70

Query: 103 IEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR 162
           +          I   +   +   L+            ++  +     +  +         
Sbjct: 71  LACGINPDKVSIYLQSAIPELFELH--------LIFSMIVTVARLQRIPSIKDMSIAAG- 121

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT---- 218
             +E     L   Y +L + D +    N    L   G D   +I    +L  R       
Sbjct: 122 -LKEIPYGLL--GYPVLMSADILMTKAN----LVPVGRDNESHIEFARELARRFNHLYKN 174

Query: 219 ------PKLFALTSPLLTTASGTKMGKTLSGAIWLNKE 250
                   +F  + PL+      KM K+L+ AI+LN +
Sbjct: 175 NFFPIPESVFTDSRPLVGIYGKNKMSKSLNNAIFLNDD 212


>gi|77460920|ref|YP_350427.1| tryptophanyl-tRNA synthetase [Pseudomonas fluorescens Pf0-1]
 gi|77384923|gb|ABA76436.1| tryptophanyl-tRNA synthetase [Pseudomonas fluorescens Pf0-1]
          Length = 451

 Score = 42.9 bits (100), Expect = 0.088,   Method: Composition-based stats.
 Identities = 21/95 (22%), Positives = 36/95 (37%), Gaps = 18/95 (18%)

Query: 166 EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL----KTPKL 221
           +  ++   ++Y +L A D + +   +   +   G DQ  ++    D+G+R        K 
Sbjct: 128 DAGITMGLYSYPVLMAADIL-MFNAHKVPV---GRDQIQHVEMARDIGQRFNHLFGQGKE 183

Query: 222 FALTSP---------LLTTASGTKMGKTLSGAIWL 247
           F  T P          L    G KM K+    I L
Sbjct: 184 F-FTMPEALIEESVATLPGLDGRKMSKSYDNTIPL 217


>gi|85708946|ref|ZP_01040012.1| S4 domain protein [Erythrobacter sp. NAP1]
 gi|85690480|gb|EAQ30483.1| S4 domain protein [Erythrobacter sp. NAP1]
          Length = 260

 Score = 42.9 bits (100), Expect = 0.088,   Method: Composition-based stats.
 Identities = 12/57 (21%), Positives = 23/57 (40%), Gaps = 1/57 (1%)

Query: 336 MPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
           MPT     ++   G  +  L+ +AG   S  E  R +    I +N+ ++      + 
Sbjct: 1   MPTNPKQSEDRPEGDRIAKLLARAG-VASRREIERMIADGRITLNDKVVETPATFLT 56


>gi|332637945|ref|ZP_08416808.1| tryptophanyl-tRNA synthetase II [Weissella cibaria KACC 11862]
          Length = 339

 Score = 42.9 bits (100), Expect = 0.089,   Method: Composition-based stats.
 Identities = 41/227 (18%), Positives = 72/227 (31%), Gaps = 43/227 (18%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSIIGDPS-FRDESRRMMRSQEIQE 101
            T   LH GH    +     +Q +G     +M      I D   F D +R     ++I  
Sbjct: 13  PTGK-LHIGHYVGSLKNRVAMQDSGEYEPFIM------IADKQAFTDNAR---DPEKIHN 62

Query: 102 NIEKIKGIFSSFIKY-----GTGKTDALMLNNETWLCSIKYIDLLREIG-SFFSVNRMLS 155
           ++          + Y        K+   + +    L  +     L  +  +    N  + 
Sbjct: 63  SL------LEVALDYLAVGIDPSKSTIFVQSAVPELSELTEY-FLNLVSIARLQRNPTVK 115

Query: 156 FESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER 215
            E  +          F  F Y + QA D + L K     +   G DQ   +    +L   
Sbjct: 116 TEIQQKGFGESIPAGF--FIYPVSQAAD-IALFKGQVVPV---GDDQEPMLEQTRELVRT 169

Query: 216 LKT-------PKLFALTSPL----LTTASGT-KMGKTLSGAIWLNKE 250
                      +   +  P     +    G  KM K+L+ AI+L+ +
Sbjct: 170 FNNYYGEGILVEPQGVFPPKGQGRIPGLDGNAKMSKSLNNAIYLSDD 216


>gi|288924576|ref|ZP_06418513.1| ribosomal large subunit pseudouridine synthase B [Prevotella buccae
           D17]
 gi|288338363|gb|EFC76712.1| ribosomal large subunit pseudouridine synthase B [Prevotella buccae
           D17]
          Length = 492

 Score = 42.9 bits (100), Expect = 0.089,   Method: Composition-based stats.
 Identities = 12/78 (15%), Positives = 32/78 (41%), Gaps = 1/78 (1%)

Query: 338 TISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
             S    + +  + L   +  AG   S  EA   +++  + +N  +++    ++   D  
Sbjct: 245 EYSEENIDPNEPIRLNKYLANAGVC-SRREADEFIQAGVVTVNGEVVTELGTKVLRTDEV 303

Query: 398 STGNIKLSFGKKNHIICH 415
              +  +S  KK +++ +
Sbjct: 304 KFHDNPVSLEKKVYVLLN 321


>gi|206974506|ref|ZP_03235422.1| putative tryptophanyl-tRNA synthetase [Bacillus cereus H3081.97]
 gi|206747149|gb|EDZ58540.1| putative tryptophanyl-tRNA synthetase [Bacillus cereus H3081.97]
          Length = 332

 Score = 42.9 bits (100), Expect = 0.089,   Method: Composition-based stats.
 Identities = 22/96 (22%), Positives = 34/96 (35%), Gaps = 17/96 (17%)

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLF 222
           L+ +  ++   + Y IL A D + L +     +   G DQ  +I    D+         F
Sbjct: 123 LEVDAGVNMGLYTYPILMAADIL-LFQATHVPV---GKDQIQHIEIARDIATYFN--HTF 176

Query: 223 ALTSPL-----------LTTASGTKMGKTLSGAIWL 247
            +T  L           L    G KM K+    I L
Sbjct: 177 GMTFTLPEYVIQEEGAILPGLDGRKMSKSYGNVIPL 212


>gi|300118341|ref|ZP_07056088.1| tryptophanyl-tRNA synthetase [Bacillus cereus SJ1]
 gi|298724310|gb|EFI65005.1| tryptophanyl-tRNA synthetase [Bacillus cereus SJ1]
          Length = 332

 Score = 42.9 bits (100), Expect = 0.090,   Method: Composition-based stats.
 Identities = 22/96 (22%), Positives = 34/96 (35%), Gaps = 17/96 (17%)

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLF 222
           L+ +  ++   + Y IL A D + L +     +   G DQ  +I    D+         F
Sbjct: 123 LEVDAGVNMGLYTYPILMAADIL-LFQATHVPV---GKDQIQHIEIARDIATYFN--HTF 176

Query: 223 ALTSPL-----------LTTASGTKMGKTLSGAIWL 247
            +T  L           L    G KM K+    I L
Sbjct: 177 GMTFTLPEYVIQEEGAILPGLDGRKMSKSYGNVIPL 212


>gi|289825453|ref|ZP_06544684.1| tryptophanyl-tRNA synthetase II [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-3139]
          Length = 297

 Score = 42.9 bits (100), Expect = 0.090,   Method: Composition-based stats.
 Identities = 35/217 (16%), Positives = 63/217 (29%), Gaps = 29/217 (13%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMR-SQEIQEN 102
            T  SLH GH    +      +  H+   L+     +       D      +    I + 
Sbjct: 13  PTG-SLHLGHYVGSLRQRVALQQDHQQYVLIADLQGL------TDNGSNPQKIRDNIPQV 65

Query: 103 IEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR 162
           +     +           T   + +    L  +  + +     +    N  +  E  +  
Sbjct: 66  LADYLAVG-----IDPALTTICLQSALPALAELTVLYMNIVTVARVERNPTVKNEIAQKG 120

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT---- 218
             R   + F    Y I QA D       +   +   G DQ   I    ++  ++ +    
Sbjct: 121 FTRSLPVGF--MAYPISQAADITA----FKAEMVPVGDDQLPMIEQTNEIVHKMNSLFSS 174

Query: 219 ---PKLFALTSPL--LTTASG-TKMGKTLSGAIWLNK 249
                  AL S    L    G  KM K+L   + L+ 
Sbjct: 175 PVLRPCQALLSDTGRLPGIDGSAKMSKSLVNTLLLSA 211


>gi|167515876|ref|XP_001742279.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163778903|gb|EDQ92517.1| predicted protein [Monosiga brevicollis MX1]
          Length = 501

 Score = 42.9 bits (100), Expect = 0.090,   Method: Composition-based stats.
 Identities = 31/213 (14%), Positives = 62/213 (29%), Gaps = 20/213 (9%)

Query: 31  CSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSII---GDPSFR 87
             Q     Y G   T    H  +   +  +    + G +   L+    + +     P   
Sbjct: 1   LKQRDAKIYWGTATTGKP-HLAYFVPMSKISDFLRAGCEVTILLADLHAYLDNMKAPWEL 59

Query: 88  DESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSF 147
            + R     + +   +E I       +K+  G +          L     +D ++     
Sbjct: 60  LKLRVEYYKEVVTAMLESIGVPVDK-LKFVIGTSYQ--------LSEKYTLDGMKLFTMC 110

Query: 148 FSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNII 207
              + + +   V  +             Y + Q  D   L     C  Q GG DQ    +
Sbjct: 111 SQHDAVKAGAEVVKQSASP---PLSGLIYPVYQWLDEEYL----GCDAQFGGVDQRKIFM 163

Query: 208 CGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
                  +L   +   L + ++   +G KM  +
Sbjct: 164 SAEKYLPKLGYKERCHLMNVMVPGLTGDKMSSS 196


>gi|49481689|ref|YP_037466.1| tryptophanyl-tRNA synthetase [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|49333245|gb|AAT63891.1| possible tryptophan--tRNA ligase (tryptophanyl-tRNA synthetase)
           [Bacillus thuringiensis serovar konkukian str. 97-27]
          Length = 332

 Score = 42.9 bits (100), Expect = 0.090,   Method: Composition-based stats.
 Identities = 22/96 (22%), Positives = 34/96 (35%), Gaps = 17/96 (17%)

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLF 222
           L+ +  ++   + Y IL A D + L +     +   G DQ  +I    D+         F
Sbjct: 123 LEVDAGVNMGLYTYPILMAADIL-LFQATHVPV---GKDQIQHIEIARDIATYFN--HTF 176

Query: 223 ALTSPL-----------LTTASGTKMGKTLSGAIWL 247
            +T  L           L    G KM K+    I L
Sbjct: 177 GMTFTLPEYVIQEEGAILPGLDGRKMSKSYGNVIPL 212


>gi|330991270|ref|ZP_08315221.1| Putative RNA pseudouridine synthase [Gluconacetobacter sp. SXCC-1]
 gi|329761289|gb|EGG77782.1| Putative RNA pseudouridine synthase [Gluconacetobacter sp. SXCC-1]
          Length = 259

 Score = 42.9 bits (100), Expect = 0.090,   Method: Composition-based stats.
 Identities = 9/63 (14%), Positives = 25/63 (39%), Gaps = 1/63 (1%)

Query: 342 SKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
           S     RG  +   + ++G   S  +A R +    +++N +++++    +   D      
Sbjct: 7   SSASAERGDRIAKWLARSG-VASRRDAERMIAEGRVQLNGAVVNHPATFVGAGDIVQVNG 65

Query: 402 IKL 404
             +
Sbjct: 66  SVV 68


>gi|325181607|emb|CCA16057.1| ATP binding protein putative [Albugo laibachii Nc14]
          Length = 773

 Score = 42.9 bits (100), Expect = 0.090,   Method: Composition-based stats.
 Identities = 39/229 (17%), Positives = 86/229 (37%), Gaps = 23/229 (10%)

Query: 19  HQISNPRELDILCSQGV-VTAYIGYDLTASSLHA--GHLTQLMLLFWLQKTGHKPISLMG 75
            + +   EL  L S+      Y G++ +   +H   G L  + +   L  +G      + 
Sbjct: 444 QECTLEEELRALLSKKDHFVCYDGFEPSGR-MHIAQGILRSVNV-NRLTDSGAIFRFWVA 501

Query: 76  GGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET-WLCS 134
              +++ +    D  +  +  + + E  +      ++        +D ++ N  + WL  
Sbjct: 502 DWFALLNNKMGGDLEKIRIVGRYMIEIWKSTGMDMTNVQFLW--ASDQIIANGASYWLRV 559

Query: 135 IKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCR 194
           +       +I    ++ R +   ++  R K ++ +   +  Y ++Q  D   L  +  C+
Sbjct: 560 M-------DIARRTTIARTVKCCTIMGR-KEKEGMLAAQILYPLMQCADIFFLKADV-CQ 610

Query: 195 LQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLLTT-ASGT-KMGKT 240
           L   G DQ    +   D  + +K   K   L+  +L     G  KM K+
Sbjct: 611 L---GLDQRKINMLARDYCDLVKIKFKPVILSHHMLMGLKEGQEKMSKS 656


>gi|260429489|ref|ZP_05783466.1| tryptophanyl-tRNA synthetase [Citreicella sp. SE45]
 gi|260420112|gb|EEX13365.1| tryptophanyl-tRNA synthetase [Citreicella sp. SE45]
          Length = 333

 Score = 42.9 bits (100), Expect = 0.090,   Method: Composition-based stats.
 Identities = 39/216 (18%), Positives = 67/216 (31%), Gaps = 29/216 (13%)

Query: 45  TASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIE 104
           T   LH GH    +      +  H+   L+    ++  +     + RR      + E   
Sbjct: 13  TGP-LHIGHYAGSLKNRLALQDSHRQFLLLADTQALTDNADDIGKVRR-----NVLEVAF 66

Query: 105 KIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-L 163
               +          KT   + ++   L  +  +  L  +            + +R+R  
Sbjct: 67  DYLAVG-----IDPAKTTICLQSHLPALAELSML-YLNFVTVARLERNPTIKDEIRARGF 120

Query: 164 KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT----- 218
            R+    FL   Y   QA D       +   +   G DQ   I    ++  R+       
Sbjct: 121 GRDIPAGFL--CYPAAQAADITA----FKATVVPVGEDQAPLIEQCNEIVRRINASAGRE 174

Query: 219 --PKLFALTSPL--LTTASGT-KMGKTLSGAIWLNK 249
             P+  AL      L    G  KM K+   AI L+ 
Sbjct: 175 VLPEAQALIPEAGRLPGIDGRAKMSKSGGNAIALSA 210


>gi|325928251|ref|ZP_08189454.1| tryptophanyl-tRNA synthetase [Xanthomonas perforans 91-118]
 gi|325541341|gb|EGD12880.1| tryptophanyl-tRNA synthetase [Xanthomonas perforans 91-118]
          Length = 429

 Score = 42.9 bits (100), Expect = 0.091,   Method: Composition-based stats.
 Identities = 21/96 (21%), Positives = 34/96 (35%), Gaps = 18/96 (18%)

Query: 164 KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFA 223
             +  ++   F Y +L A D + +   +   +   G DQ  +I    D  +R     ++ 
Sbjct: 124 DEDAGVTAGLFMYPVLMAADIL-IFNAHKVPV---GRDQIQHIEMARDFAQRFN--HVYG 177

Query: 224 ---LTSP---------LLTTASGTKMGKTLSGAIWL 247
               T P          L    G KM K+ S  I L
Sbjct: 178 RDFFTLPEAVIDEQVSTLPGLDGRKMSKSYSNTIPL 213


>gi|47230042|emb|CAG10456.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 472

 Score = 42.9 bits (100), Expect = 0.092,   Method: Composition-based stats.
 Identities = 53/327 (16%), Positives = 102/327 (31%), Gaps = 49/327 (14%)

Query: 15  RGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +  + LD    Q     Y G   ++ ++H GHL   +   WLQ     P+ +
Sbjct: 138 RGIFFSHRDMHQVLDAYEKQKSFYLYTGRGPSSEAMHVGHLIPFIFTKWLQDVFDVPLVI 197

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                         D+ + + +   I+E            I  G       + ++  ++ 
Sbjct: 198 -----------QLTDDEKYLWKDLTIEECHRFAVENAKDIIACGFDVNKTFIFSDLDYMG 246

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA--------YDFV 185
                +  R +         ++F  V+       S    + ++  +QA            
Sbjct: 247 --ASPEFYRNVVKIEKH---VTFNQVKGIFGFTDSDCIGKISFPAIQAAPSFSNSFPQIF 301

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTASGTKMGKTLS 242
              K+  C +     DQ        D+  R+  PK   L +   P L  A  TKM  + +
Sbjct: 302 GSRKDIQCLIPC-AIDQDPYFRMTRDVAPRIGYPKPALLHSTFFPALQGAQ-TKMSASDA 359

Query: 243 G-AIWLN------KEMTSPYNF---------WQYWRNIDDADV-VSFAKRL--TTLPMSE 283
             +I+L       K   + + F          + +    D DV   +          + +
Sbjct: 360 NSSIFLTDTPKQIKNKVNKHAFSGGKDTVEEHRKYGGNPDVDVSFMYLTFFLEDDEQLEK 419

Query: 284 IDRMAKLQGKEINEAKKIIATEITTMV 310
           I +          E KK++   +  M+
Sbjct: 420 IRQDYASGALLTGELKKLLIETLQPMI 446


>gi|294814588|ref|ZP_06773231.1| Tryptophanyl-tRNA synthetase 1 [Streptomyces clavuligerus ATCC
           27064]
 gi|326442976|ref|ZP_08217710.1| tryptophanyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|294327187|gb|EFG08830.1| Tryptophanyl-tRNA synthetase 1 [Streptomyces clavuligerus ATCC
           27064]
          Length = 347

 Score = 42.9 bits (100), Expect = 0.093,   Method: Composition-based stats.
 Identities = 48/296 (16%), Positives = 93/296 (31%), Gaps = 45/296 (15%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   TA S H G+    +  +   +  H    ++    + I  P    E R         
Sbjct: 21  GIQPTAGSFHLGNYLGAIRQYVALQETHDAFYMVVDLHA-ITVPQDPAELR--------- 70

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLS-FESV 159
               ++             +    + ++      + +  ++  +  F   +RM    +  
Sbjct: 71  -ANTRLAAAQLLAAGLDPDRCTLFIQSHVPEHAQLGW--VMNCLTGFGEASRMTQFKDKS 127

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT- 218
             +     ++    F Y +LQ  D + L +     +   G DQ  +I    DL ER  T 
Sbjct: 128 AKQGADRATVGL--FTYPVLQVADIL-LYQADAVPV---GEDQRQHIELTRDLAERFNTR 181

Query: 219 -PKLFALTSPLLTT---------ASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRN-IDDA 267
               F++ +P +               KM K+ S    L   +  P    +  ++ + D 
Sbjct: 182 FGDTFSVPAPHIVKEVAKIYDLQDPAVKMSKSASTPKGLINLLDEPKATAKKVKSAVTDT 241

Query: 268 D------------VVSFAKRLTTLPMSEIDRMAKL-QGKEINEAKKIIATEITTMV 310
           D            V +     +TL    +  + K  +GK     K  +A  +   V
Sbjct: 242 DTVIRFDPVEKPGVSNLLTIYSTLTGRTVAELEKEYEGKMYGALKTDLAEVMVEFV 297


>gi|222096814|ref|YP_002530871.1| tryptophanyl-tRNA synthetase [Bacillus cereus Q1]
 gi|221240872|gb|ACM13582.1| possible tryptophan--tRNA ligase (tryptophanyl-tRNA synthetase)
           [Bacillus cereus Q1]
          Length = 332

 Score = 42.9 bits (100), Expect = 0.093,   Method: Composition-based stats.
 Identities = 22/96 (22%), Positives = 34/96 (35%), Gaps = 17/96 (17%)

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLF 222
           L+ +  ++   + Y IL A D + L +     +   G DQ  +I    D+         F
Sbjct: 123 LEVDAGVNMGLYTYPILMAADIL-LFQATHVPV---GKDQIQHIEIARDIATYFN--HTF 176

Query: 223 ALTSPL-----------LTTASGTKMGKTLSGAIWL 247
            +T  L           L    G KM K+    I L
Sbjct: 177 GMTFTLPEYVIQEEGAILPGLDGRKMSKSYGNVIPL 212


>gi|297559952|ref|YP_003678926.1| pseudouridine synthase [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
 gi|296844400|gb|ADH66420.1| pseudouridine synthase [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
          Length = 694

 Score = 42.9 bits (100), Expect = 0.094,   Method: Composition-based stats.
 Identities = 11/90 (12%), Positives = 30/90 (33%), Gaps = 4/90 (4%)

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKD---EVSRGMGLLTLIVKAGFATS 364
             V    +  KAA   +         +       ++D   +V  G+ L   +  AG   S
Sbjct: 412 KRVTSENQLSKAARERLSALRADYDPKDEDHADEARDTYTDVENGIRLQKALAAAG-VAS 470

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
              +   + +  + ++  ++     ++  +
Sbjct: 471 RRASEEMIAAGRVSVDGQVVRRFGARVDPE 500


>gi|15668362|ref|NP_247158.1| 30S ribosomal protein S4P [Methanocaldococcus jannaschii DSM 2661]
 gi|1710769|sp|P54020|RS4_METJA RecName: Full=30S ribosomal protein S4P
 gi|1498964|gb|AAB98170.1| SSU ribosomal protein S4P (rpsD) [Methanocaldococcus jannaschii DSM
           2661]
          Length = 187

 Score = 42.9 bits (100), Expect = 0.094,   Method: Composition-based stats.
 Identities = 20/126 (15%), Positives = 47/126 (37%), Gaps = 9/126 (7%)

Query: 281 MSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS 340
             E+ +   +  K   +A+++I+          + A++A           I     PT+ 
Sbjct: 39  KREVWKAETILRKYRRQARRLISDRT------EQGAKEAVQLFNVLKKYGILKIENPTLD 92

Query: 341 ISKDEVSRGM---GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
                    +    L TL+ + G A +  +AR+ +    I +N  +++     + +++ D
Sbjct: 93  DVLSLTVEDILERRLQTLVFRKGLARTPRQARQLIVHGHIAVNGRVVTAPSYMVTVEEED 152

Query: 398 STGNIK 403
                K
Sbjct: 153 KISYAK 158


>gi|328463917|gb|EGF35435.1| tryptophanyl-tRNA synthetase II [Lactobacillus helveticus MTCC
           5463]
          Length = 340

 Score = 42.9 bits (100), Expect = 0.095,   Method: Composition-based stats.
 Identities = 36/225 (16%), Positives = 67/225 (29%), Gaps = 37/225 (16%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     LQ +G + P  ++    ++  +    ++ R  +    +  
Sbjct: 12  PTGK-LHIGHYIGSLKNRVKLQNSGKYDPYIMIADTQALTDNARNPEKIRNSLIQVALDY 70

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
               I             K+   + +    L  +    +     +    N  +  E  + 
Sbjct: 71  LAVGI----------DPSKSTIYVQSQIPALFELTSYYMDLVTVARLERNPTVKTEIKQK 120

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKL 221
             K    + FL  NY + QA D       +   +   G DQ   +    ++         
Sbjct: 121 DFKDSIPVGFL--NYPVSQAADITA----FKATIVPVGDDQEPMLEQTREIVRTFNR--- 171

Query: 222 FALTSPL--------------LTTASGT-KMGKTLSGAIWLNKEM 251
              T  L              L    G  KM K+L   I+L+ + 
Sbjct: 172 VYNTDILVEPKGYFPPKGSGRLPGLDGNAKMSKSLGNCIYLSDDA 216


>gi|169825170|ref|YP_001692781.1| tryptophanyl-tRNA synthetase II [Finegoldia magna ATCC 29328]
 gi|167831975|dbj|BAG08891.1| tryptophanyl-tRNA synthetase [Finegoldia magna ATCC 29328]
          Length = 360

 Score = 42.9 bits (100), Expect = 0.095,   Method: Composition-based stats.
 Identities = 54/351 (15%), Positives = 105/351 (29%), Gaps = 60/351 (17%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGH--KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +     +Q  G   K   ++    ++  + +  D+ R     + I 
Sbjct: 11  PTGK-LHLGHYVGSLKNRVIMQNKGDFDKMYVMIADAQALTDNFNNPDKVR-----ENII 64

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           E                  K    + ++   L  + +  +     S    N  +  E  +
Sbjct: 65  EVALDYLSCG-----IDPNKVTVFVQSHVEQLTELMFYYMNLVTLSRLERNPTVKAEIKQ 119

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT-- 218
                   + FL   Y I QA D       ++  +   G DQ   +    ++        
Sbjct: 120 KEFGASLPVGFL--TYPISQAADITL----FNANIVPVGEDQLPMLEQTREIVRTFNNYY 173

Query: 219 ------PKLFALTSPL---LTTASGT-KMGKTLSGAIWL-NKEMTSPYNFWQYW-----R 262
                 PK     + +   L    G  KM K+L   I+L + E          +      
Sbjct: 174 SEVLVEPKAVIPDNKICSRLPGLDGKAKMSKSLGNCIYLSDSEKDVKSKVMSMFTDPNHI 233

Query: 263 NIDD------ADVVSFAKRL-------TTLP----MSEIDRMAKLQGKEINEAKK----I 301
            I D        V ++             LP    + E+    +  G    + KK    I
Sbjct: 234 QISDPGKVEGNTVFTYLDAFCVDDDFSEFLPDYKNLDELKDHYRRGGLGDVKIKKFLNNI 293

Query: 302 IATEITTMVHGREEAEK-AATAAMECFDMSIHSQHMPTISISKDEVSRGMG 351
           +  E++ +   R+  E+            S  ++ +   ++ K + + G+ 
Sbjct: 294 LQKELSPIREKRKHYEQNIPEIFDMLLKGSEDAREVGAETLKKVKAAMGIN 344


>gi|50292421|ref|XP_448643.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49527955|emb|CAG61606.1| unnamed protein product [Candida glabrata]
          Length = 484

 Score = 42.9 bits (100), Expect = 0.095,   Method: Composition-based stats.
 Identities = 22/127 (17%), Positives = 42/127 (33%), Gaps = 20/127 (15%)

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFD-------------MSIHSQHMPTISISKDE 345
           +K  A + T   HG    E         F                  ++  P +  +   
Sbjct: 44  QKWSAKQETRAYHGEHITES---RWQTMFSPKLDSVAQLDASLRGGVTKETPFLMQTFAT 100

Query: 346 VSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD-FDSTGNIKL 404
           + + +     + +A FA+S  +AR+ +    + +N   I +    +K  D F+      L
Sbjct: 101 LEKRLDFA--VFRAMFASSVRQARQFILHGNVYVNGVKIKHPGYTLKPGDTFNVKPEKVL 158

Query: 405 SF-GKKN 410
              G K 
Sbjct: 159 QALGSKK 165


>gi|33597729|ref|NP_885372.1| tryptophanyl-tRNA synthetase [Bordetella parapertussis 12822]
 gi|33602577|ref|NP_890137.1| tryptophanyl-tRNA synthetase [Bordetella bronchiseptica RB50]
 gi|39932128|sp|Q7W5T6|SYW_BORPA RecName: Full=Tryptophanyl-tRNA synthetase; AltName:
           Full=Tryptophan--tRNA ligase; Short=TrpRS
 gi|39932136|sp|Q7WGI7|SYW_BORBR RecName: Full=Tryptophanyl-tRNA synthetase; AltName:
           Full=Tryptophan--tRNA ligase; Short=TrpRS
 gi|33574157|emb|CAE38487.1| tryptophanyl-tRNA synthetase [Bordetella parapertussis]
 gi|33577016|emb|CAE34096.1| tryptophanyl-tRNA synthetase [Bordetella bronchiseptica RB50]
          Length = 451

 Score = 42.9 bits (100), Expect = 0.095,   Method: Composition-based stats.
 Identities = 20/94 (21%), Positives = 35/94 (37%), Gaps = 14/94 (14%)

Query: 164 KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK---TPK 220
           + +  ++   F+Y +L A D + L       +   G DQ  ++    D+ +R       +
Sbjct: 124 EPDDGVTMGLFSYPVLMAADIL-LFNANQVPV---GRDQVQHLEMARDIAQRFNHLYGRE 179

Query: 221 LFAL-------TSPLLTTASGTKMGKTLSGAIWL 247
            F L           L    G KM K+ +  I L
Sbjct: 180 FFVLPEVVIAEEVATLPGLDGRKMSKSYNNTIPL 213


>gi|33592275|ref|NP_879919.1| tryptophanyl-tRNA synthetase [Bordetella pertussis Tohama I]
 gi|39932122|sp|Q7VZ05|SYW_BORPE RecName: Full=Tryptophanyl-tRNA synthetase; AltName:
           Full=Tryptophan--tRNA ligase; Short=TrpRS
 gi|33571920|emb|CAE41440.1| tryptophanyl-tRNA synthetase [Bordetella pertussis Tohama I]
 gi|332381692|gb|AEE66539.1| tryptophanyl-tRNA synthetase [Bordetella pertussis CS]
          Length = 451

 Score = 42.9 bits (100), Expect = 0.095,   Method: Composition-based stats.
 Identities = 20/94 (21%), Positives = 35/94 (37%), Gaps = 14/94 (14%)

Query: 164 KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK---TPK 220
           + +  ++   F+Y +L A D + L       +   G DQ  ++    D+ +R       +
Sbjct: 124 EPDDGVTMGLFSYPVLMAADIL-LFNANQVPV---GRDQVQHLEMARDIAQRFNHLYGRE 179

Query: 221 LFAL-------TSPLLTTASGTKMGKTLSGAIWL 247
            F L           L    G KM K+ +  I L
Sbjct: 180 FFVLPEVVIAEEVATLPGLDGRKMSKSYNNTIPL 213


>gi|20807900|ref|NP_623071.1| tryptophanyl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4]
 gi|25009428|sp|Q8R9X8|SYW_THETN RecName: Full=Tryptophanyl-tRNA synthetase; AltName:
           Full=Tryptophan--tRNA ligase; Short=TrpRS
 gi|20516467|gb|AAM24675.1| Tryptophanyl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4]
          Length = 327

 Score = 42.9 bits (100), Expect = 0.095,   Method: Composition-based stats.
 Identities = 44/297 (14%), Positives = 101/297 (34%), Gaps = 54/297 (18%)

Query: 37  TAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSII--GDPSFRDESRRMM 94
             + G   +   +H G+    M  F   +  +     +    ++    DP         +
Sbjct: 3   RVFSGVQPSGD-IHIGNYLGAMRQFVALQDDYDCFFCVVDLHALTVPQDP-------VEL 54

Query: 95  RSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRML 154
           +   I+     +       I     K    + ++ +    + ++  L+ I  F  ++RM 
Sbjct: 55  KKNTIELAALYMA------IGLDPKKVTLFVQSHVSAHAELAWL--LQCITYFGELSRMT 106

Query: 155 SFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
                + + K ++S+S   F Y  L A D + L K +   +   G DQ  ++    D+ +
Sbjct: 107 Q---FKEKSKGKESVSVGLFTYPDLMAADIL-LYKTHYVPV---GEDQKQHLELTRDVAQ 159

Query: 215 RLKT--PKLFALTSPLLTTASG---------TKMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
           R      + F +  P++               KM K+ +        +  P   ++    
Sbjct: 160 RFNNRFGETFVIPEPMILKFGARIMSLTNPTKKMSKSDADPNNRVNLLDDPDTIYRKIMK 219

Query: 264 -IDDAD---------------VVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
            + D++               +++     T + + E+  + K +G+     KK +A 
Sbjct: 220 AVTDSESEIRLDWEKKPGISNLLTIYSLFTGMEVDEV--VNKFKGQGYGTLKKELAE 274


>gi|260102227|ref|ZP_05752464.1| tryptophan-tRNA ligase [Lactobacillus helveticus DSM 20075]
 gi|260083968|gb|EEW68088.1| tryptophan-tRNA ligase [Lactobacillus helveticus DSM 20075]
          Length = 340

 Score = 42.9 bits (100), Expect = 0.096,   Method: Composition-based stats.
 Identities = 36/225 (16%), Positives = 67/225 (29%), Gaps = 37/225 (16%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     LQ +G + P  ++    ++  +    ++ R  +    +  
Sbjct: 12  PTGK-LHIGHYIGSLKNRVKLQNSGKYDPYIMIADTQALTDNARNPEKIRNSLIQVALDY 70

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
               I             K+   + +    L  +    +     +    N  +  E  + 
Sbjct: 71  LAVGI----------DPSKSTIYVQSQIPALFELTSYYMDLVTVARLERNPTVKTEIKQK 120

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKL 221
             K    + FL  NY + QA D       +   +   G DQ   +    ++         
Sbjct: 121 DFKDSIPVGFL--NYPVSQAADITA----FKATIVPVGDDQEPMLEQTREIVRTFNR--- 171

Query: 222 FALTSPL--------------LTTASGT-KMGKTLSGAIWLNKEM 251
              T  L              L    G  KM K+L   I+L+ + 
Sbjct: 172 VYNTDILVEPKGYFPPKGSGRLPGLDGNAKMSKSLGNCIYLSDDA 216


>gi|88861002|ref|ZP_01135637.1| tryptophanyl-tRNA synthetase [Pseudoalteromonas tunicata D2]
 gi|88816930|gb|EAR26750.1| tryptophanyl-tRNA synthetase [Pseudoalteromonas tunicata D2]
          Length = 334

 Score = 42.9 bits (100), Expect = 0.096,   Method: Composition-based stats.
 Identities = 47/297 (15%), Positives = 90/297 (30%), Gaps = 47/297 (15%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   T   +  G+    +  +   +  H    ++    + I         R+ +      
Sbjct: 9   GIQPTGG-MTIGNYIGAINQWLTLQQDHDCFFMLVDLHA-ITVRQEPAVLRQRVLDGIAL 66

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
                I    S+          A +    +W        +L        +NRM  F+   
Sbjct: 67  YAACGIDPEKSALFVQSQVPEHAQL----SW--------VLNCYAQMGELNRMTQFKD-- 112

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT-- 218
              K   +++   ++Y +LQA D + L +     +   G DQ  ++    D+  R     
Sbjct: 113 KSAKNVNNINVGLYSYPVLQAADIL-LYQADQVPV---GEDQKQHLELTRDIANRFNNLY 168

Query: 219 PKLFALTSPLLTTASG---------TKMGKTL---SGAIWLNKEMTSPYNFWQYWRNIDD 266
             +F +  P +               KM K+    +G I L  E        +      D
Sbjct: 169 GDVFKIPEPYIPQFGARVMSLQDPSKKMSKSDENPNGYIMLLDEPKQIEKKLKKAVTDSD 228

Query: 267 ADVVSFAK---------RLTTLPMSEIDRMAKL----QGKEINEAKKIIATEITTMV 310
                +            LT L ++    + +L    +GK     KK  A  + +M+
Sbjct: 229 EQARIYFDPQEKAGVSNLLTLLSVATKRSIEELVPDYEGKMYGHLKKDTADAVVSMI 285


>gi|260425745|ref|ZP_05779725.1| ribosomal large subunit pseudouridine synthase B [Citreicella sp.
           SE45]
 gi|260423685|gb|EEX16935.1| ribosomal large subunit pseudouridine synthase B [Citreicella sp.
           SE45]
          Length = 316

 Score = 42.9 bits (100), Expect = 0.097,   Method: Composition-based stats.
 Identities = 11/49 (22%), Positives = 23/49 (46%), Gaps = 1/49 (2%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
             G  +  ++ +AG   S  EA + ++   + +N  II+   L +  +D
Sbjct: 52  PAGDRIAKVLARAG-VASRREAEKMIEMGRVAVNGEIITRAALNVTDKD 99


>gi|125560138|gb|EAZ05586.1| hypothetical protein OsI_27802 [Oryza sativa Indica Group]
          Length = 341

 Score = 42.9 bits (100), Expect = 0.097,   Method: Composition-based stats.
 Identities = 44/299 (14%), Positives = 94/299 (31%), Gaps = 41/299 (13%)

Query: 15  RGFIHQISNPRELDILCSQGVVTA-YIGYDLTASSLHA--GHLTQLMLLFWLQKTGHKPI 71
           RG   +     EL  L  +  V   Y G++ +   +H   G + + + +  + + G K  
Sbjct: 44  RGIGEECIQEDELLNLLQKKPVPICYDGFEPSGR-MHIAQG-IVKTINVNKMVRAGCKVK 101

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
             +    + + +    D  +     + + E            +++     +     NE W
Sbjct: 102 IWIADWFAQLNNKMGGDIKKIQTVGRYMIEIWRAAGMNLD-GVEFLWSSEEINKRANEYW 160

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
                   L+ +I    +V R++    +  R      L+  +  Y  +Q  D   L  + 
Sbjct: 161 P-------LVMDIARKNNVKRIMRCCQIMGR-NDSDELTAAQIFYPCMQCADIFFLKADI 212

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
            C+L   G DQ             LK  + F    P +             G   L    
Sbjct: 213 -CQL---GMDQ-------RKAQVNLKIKQAFC--PPTIVD-----------GNPCLEYIK 248

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMV 310
              + +++ +  +   +        T   M+E+    +       + K  +A  I  ++
Sbjct: 249 YIVFPWFETFEVVRKEENGGNK---TFANMNELIADYESGALHPADVKPALAKAINQIL 304


>gi|80477042|gb|AAI08785.1| Unknown (protein for MGC:132108) [Xenopus laevis]
          Length = 475

 Score = 42.9 bits (100), Expect = 0.097,   Method: Composition-based stats.
 Identities = 45/328 (13%), Positives = 102/328 (31%), Gaps = 51/328 (15%)

Query: 15  RGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +  + LD    +     Y G   ++ ++H GHL   +   WLQ+  + P+ +
Sbjct: 139 RGIFFSHRDMHQVLDAYEKKKPFYLYTGRGPSSEAMHVGHLIPFIFTKWLQEVFNVPLVV 198

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                         D+ + + +   +++  +         I  G       + ++  ++ 
Sbjct: 199 -----------QLTDDEKYLWKDLTLEKAYQYATENAKDIIACGFDVNKTFIFSDLEYMG 247

Query: 134 S-IKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA--------YDF 184
               +   + ++    + N+      V+       S    + ++  +QA         + 
Sbjct: 248 KSPGFYQNVVKVQKHVTFNQ------VKGIFGFTDSDCIGKISFPAIQAAPSFSSSFPEI 301

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKL---FALTSPLLTTASGTKMGKTL 241
            +  K+  C +     DQ        D+  R+  PK     +   P L  A  TKM  + 
Sbjct: 302 FKGRKDIQCLIPC-AIDQDPYFRMTRDVAPRINYPKPALMHSTFFPALQGAQ-TKMSASD 359

Query: 242 SG-AIWLNKE----------------MTSPYNFWQYWRNIDDADVVSFAKRL--TTLPMS 282
              +I+L                     +     Q+  N +      +          + 
Sbjct: 360 PNSSIFLTDTAKQIKSKINKHAFSGGKDTIEEHRQFGGNWEVDVSYMYLTFFLEDDERLE 419

Query: 283 EIDRMAKLQGKEINEAKKIIATEITTMV 310
           +I +          + KKI+   +  M+
Sbjct: 420 QIKQDYSSGALLTGDLKKILTETLQPMI 447


>gi|82701924|ref|YP_411490.1| 30S ribosomal protein S4 [Nitrosospira multiformis ATCC 25196]
 gi|90101698|sp|Q2YAX3|RS4_NITMU RecName: Full=30S ribosomal protein S4
 gi|82409989|gb|ABB74098.1| SSU ribosomal protein S4P [Nitrosospira multiformis ATCC 25196]
          Length = 208

 Score = 42.9 bits (100), Expect = 0.097,   Method: Composition-based stats.
 Identities = 21/76 (27%), Positives = 31/76 (40%), Gaps = 15/76 (19%)

Query: 349 GMGLLTLI--------VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG 400
           G  LL L+         + GF  S +EAR+ ++ N I +N   I+    Q+K  D     
Sbjct: 89  GENLLQLLECRLDTVSYRMGFGASRSEARQIVRHNGILVNGRRINIPSYQVKPGDVIEVA 148

Query: 401 NIKLSFGK-KNHIICH 415
                  K KNH+   
Sbjct: 149 E------KAKNHLRIK 158


>gi|296816497|ref|XP_002848585.1| tryptophanyl-tRNA synthetase [Arthroderma otae CBS 113480]
 gi|238839038|gb|EEQ28700.1| tryptophanyl-tRNA synthetase [Arthroderma otae CBS 113480]
          Length = 433

 Score = 42.9 bits (100), Expect = 0.098,   Method: Composition-based stats.
 Identities = 15/61 (24%), Positives = 22/61 (36%), Gaps = 1/61 (1%)

Query: 15  RGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +  + LD          Y G   ++ +LH GH        WLQ     P+ +
Sbjct: 80  RGLFFSHRDFDKILDKYEYGEPFFLYTGRGPSSDALHLGHTIPFAFTKWLQDVFDVPLVI 139

Query: 74  M 74
           M
Sbjct: 140 M 140


>gi|241766626|ref|ZP_04764476.1| tryptophanyl-tRNA synthetase [Acidovorax delafieldii 2AN]
 gi|241363095|gb|EER58718.1| tryptophanyl-tRNA synthetase [Acidovorax delafieldii 2AN]
          Length = 434

 Score = 42.9 bits (100), Expect = 0.098,   Method: Composition-based stats.
 Identities = 28/210 (13%), Positives = 60/210 (28%), Gaps = 25/210 (11%)

Query: 50  HAGHLTQLML--LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIK 107
           H G+    +   +    + G +    +    ++I         R  +  +     +    
Sbjct: 17  HLGNFVGSIRPSVAASLRPGVQSFYFLADYHALIKCEDPARIQRSTL--EIAASWLAAGL 74

Query: 108 GIFS-SFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE 166
                +F +         +    TWL  +  +     +    +        +   R +++
Sbjct: 75  DPEKVTFYRQSDIPETTEL----TWL--LTCVTGKGLLNRAHAYKAAQDKNAAAGR-EQD 127

Query: 167 QSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTS 226
             ++   F Y +L   D + +   +   +   G DQ  +I    D+            T 
Sbjct: 128 DGVTAGLFMYPVLMGADIL-IFNAHKVPV---GRDQIQHIEMARDMAASFNHLYGEHFTL 183

Query: 227 P---------LLTTASGTKMGKTLSGAIWL 247
           P          L    G KM K+    I L
Sbjct: 184 PEAAVDEHVATLPGLDGRKMSKSYDNTIPL 213


>gi|225352189|ref|ZP_03743212.1| hypothetical protein BIFPSEUDO_03805 [Bifidobacterium
           pseudocatenulatum DSM 20438]
 gi|225157436|gb|EEG70775.1| hypothetical protein BIFPSEUDO_03805 [Bifidobacterium
           pseudocatenulatum DSM 20438]
          Length = 253

 Score = 42.9 bits (100), Expect = 0.098,   Method: Composition-based stats.
 Identities = 9/55 (16%), Positives = 25/55 (45%), Gaps = 2/55 (3%)

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDST--GNIKLSFG 407
            +++ G   S ++A+R +    + +N   ++    ++   D  +   G+  +S G
Sbjct: 15  ALLERGLTDSRSKAQRLIADGKVSVNGVTVTKASAKVGGDDVIAADRGDGYVSRG 69


>gi|15604238|ref|NP_220754.1| lysyl-tRNA synthetase [Rickettsia prowazekii str. Madrid E]
 gi|6226186|sp|Q9ZDF8|SYK_RICPR RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|3860930|emb|CAA14830.1| LYSYL-tRNA SYNTHETASE (lysS) [Rickettsia prowazekii]
 gi|292571980|gb|ADE29895.1| Lysyl-tRNA synthetase [Rickettsia prowazekii Rp22]
          Length = 528

 Score = 42.9 bits (100), Expect = 0.098,   Method: Composition-based stats.
 Identities = 18/118 (15%), Positives = 35/118 (29%), Gaps = 14/118 (11%)

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            DF           +M G D   N     ++   L           L   A+G K+ K+ 
Sbjct: 236 PDFGMRWAALKVDYEMYGKDHLANSRLYSEICRILGGKPPVQFCYELFLDANGEKISKSR 295

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSF------AKRLTTLPMSEIDRMAKLQGK 293
             +I ++         W  + +++   +  +       +    L    +D    L  K
Sbjct: 296 GNSISVDD--------WLKYASVESIALFMYKNPARAKRLFFDLIPKNVDEYITLNQK 345


>gi|75762601|ref|ZP_00742450.1| Tryptophanyl-tRNA synthetase [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
 gi|228901848|ref|ZP_04066018.1| Tryptophanyl-tRNA synthetase [Bacillus thuringiensis IBL 4222]
 gi|74489910|gb|EAO53277.1| Tryptophanyl-tRNA synthetase [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
 gi|228857789|gb|EEN02279.1| Tryptophanyl-tRNA synthetase [Bacillus thuringiensis IBL 4222]
          Length = 348

 Score = 42.9 bits (100), Expect = 0.098,   Method: Composition-based stats.
 Identities = 22/96 (22%), Positives = 34/96 (35%), Gaps = 17/96 (17%)

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLF 222
           L+ +  ++   + Y IL A D + L +     +   G DQ  +I    D+         F
Sbjct: 136 LEIDAGVNMGLYTYPILMAADIL-LFQATHVPV---GKDQIQHIEIARDIATYFN--HTF 189

Query: 223 ALTSPL-----------LTTASGTKMGKTLSGAIWL 247
            +T  L           L    G KM K+    I L
Sbjct: 190 GMTFTLPEYVIQEEGAILPGLDGRKMSKSYGNVIPL 225


>gi|78049654|ref|YP_365829.1| tryptophanyl-tRNA synthetase [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
 gi|78038084|emb|CAJ25829.1| tryptophanyl-tRNA synthetase [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
          Length = 429

 Score = 42.9 bits (100), Expect = 0.099,   Method: Composition-based stats.
 Identities = 21/96 (21%), Positives = 34/96 (35%), Gaps = 18/96 (18%)

Query: 164 KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFA 223
             +  ++   F Y +L A D + +   +   +   G DQ  +I    D  +R     ++ 
Sbjct: 124 DEDAGVTAGLFMYPVLMAADIL-IFNAHKVPV---GRDQIQHIEMARDFAQRFN--HVYG 177

Query: 224 ---LTSP---------LLTTASGTKMGKTLSGAIWL 247
               T P          L    G KM K+ S  I L
Sbjct: 178 RDFFTLPEAVIDEQVSTLPGLDGRKMSKSYSNTIPL 213


>gi|255034236|ref|YP_003084857.1| tryptophanyl-tRNA synthetase [Dyadobacter fermentans DSM 18053]
 gi|254946992|gb|ACT91692.1| tryptophanyl-tRNA synthetase [Dyadobacter fermentans DSM 18053]
          Length = 325

 Score = 42.9 bits (100), Expect = 0.100,   Method: Composition-based stats.
 Identities = 21/87 (24%), Positives = 31/87 (35%), Gaps = 24/87 (27%)

Query: 174 FNYMILQAYDFVELAKNYDCRLQMGGSDQW------------GNIICGIDLGERLKTPKL 221
           F Y +LQA D +     Y+  +   G DQ              NI+ G ++   +     
Sbjct: 125 FTYPVLQAADILL----YNANIIPVGKDQKQHLEMTKDIANRFNILAGEEI--LVLPEPQ 178

Query: 222 F---ALTSPLLTTASGTKMGKTLSGAI 245
                +T P L    G KM K+    I
Sbjct: 179 IDERIMTIPGL---DGQKMSKSYHNYI 202


>gi|90416453|ref|ZP_01224384.1| tryptophanyl-tRNA synthetase [marine gamma proteobacterium
           HTCC2207]
 gi|90331652|gb|EAS46880.1| tryptophanyl-tRNA synthetase [marine gamma proteobacterium
           HTCC2207]
          Length = 335

 Score = 42.9 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 19/93 (20%), Positives = 34/93 (36%), Gaps = 13/93 (13%)

Query: 164 KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFA 223
             +  ++   F+Y IL A D +    +   ++ +G  DQ  ++    D+ +R        
Sbjct: 125 DADHGINMGLFSYPILMAADILMFNAH---KIPVG-RDQIQHVEMARDVAQRFNHHYGEH 180

Query: 224 LTSP---------LLTTASGTKMGKTLSGAIWL 247
              P         +L    G KM K+    I L
Sbjct: 181 FVLPAAVVDDKVAVLQGLDGRKMSKSYGNTIPL 213


>gi|85374929|ref|YP_458991.1| tryptophanyl-tRNA synthetase [Erythrobacter litoralis HTCC2594]
 gi|84788012|gb|ABC64194.1| tryptophanyl-tRNA synthase [Erythrobacter litoralis HTCC2594]
          Length = 352

 Score = 42.9 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 41/221 (18%), Positives = 79/221 (35%), Gaps = 31/221 (14%)

Query: 41  GYDLTASSLHAGHLT-QLMLLFWLQK-TGHKPISLMGGGTSIIGDPSFRDES----RRMM 94
           G   T + LH G+    +     +Q   G    +  GG      +  F         +  
Sbjct: 6   GIQPTGN-LHLGNYLGAIRNWVKMQDEMGAPAQAAEGGSAEEASECLFFLADLHAISQPH 64

Query: 95  RSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRML 154
              E++ N  ++     + +  G     ++M N        +   LL   G    +NRM 
Sbjct: 65  DPAELRRNTLEMAA---ALVACGIDPDRSVMFNQAQVPAHAELQWLLMGTGRMGWLNRMT 121

Query: 155 SFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
            ++    + +  QS++   F Y +LQA D + L +     +   G DQ  ++    D+ +
Sbjct: 122 QWKDKAGKNREGQSVAL--FAYPVLQAADVL-LYQATHVPV---GEDQKQHLELARDIAQ 175

Query: 215 RL------KTPKLFALTSP--------LLTTASG-TKMGKT 240
           +       +   +F L  P        +++   G  KM K+
Sbjct: 176 KFNNDFASEDAPVFTLPDPYIPPQAARIMSLRDGSAKMSKS 216


>gi|837|emb|CAA36356.1| unnamed protein product [Bos taurus]
          Length = 459

 Score = 42.9 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 14/60 (23%), Positives = 26/60 (43%), Gaps = 1/60 (1%)

Query: 15  RGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +  + LD   ++     Y G   ++ ++H GHL   +   WLQ   + P+ +
Sbjct: 123 RGIFFSHRDMHQILDAYENKKPFYLYTGRGPSSEAMHVGHLIPFIFTKWLQDVFNVPLVI 182


>gi|241203351|ref|YP_002974447.1| hemolysin A [Rhizobium leguminosarum bv. trifolii WSM1325]
 gi|240857241|gb|ACS54908.1| hemolysin A [Rhizobium leguminosarum bv. trifolii WSM1325]
          Length = 248

 Score = 42.9 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 8/41 (19%), Positives = 16/41 (39%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
            L+V  G   S + AR  ++   +KI   +++         
Sbjct: 11  QLLVSLGLFASRSRARDAVQRGTVKIGGQVVTKAGALFGAD 51


>gi|229151534|ref|ZP_04279737.1| hypothetical protein bcere0011_30790 [Bacillus cereus m1550]
 gi|228632077|gb|EEK88703.1| hypothetical protein bcere0011_30790 [Bacillus cereus m1550]
          Length = 327

 Score = 42.9 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 47/159 (29%), Gaps = 25/159 (15%)

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLF 222
           L+ +  ++   + Y IL A D + L +     +   G DQ  +I    D+         F
Sbjct: 118 LEVDAGVNMGLYTYPILMAADIL-LFQATHVPV---GKDQIQHIEIARDIATYFN--HTF 171

Query: 223 ALTSPL-----------LTTASGTKMGKTLSGAIWL--NKEMTSPYNFWQYWRNIDDADV 269
             T  L           L    G KM K+    I L   +E      F     +    + 
Sbjct: 172 GTTFTLPEYVIQEEGAILPGLDGRKMSKSYGNVIPLFAEQEKLRKLIFKIKTDSSLPNEP 231

Query: 270 VSFAKRLT----TLPMSEID--RMAKLQGKEINEAKKII 302
                  T         EI   R     G    + KK +
Sbjct: 232 KELETLFTIYKEFATEDEIQSLREKYETGIGWGDVKKEL 270


>gi|226323342|ref|ZP_03798860.1| hypothetical protein COPCOM_01116 [Coprococcus comes ATCC 27758]
 gi|225208026|gb|EEG90380.1| hypothetical protein COPCOM_01116 [Coprococcus comes ATCC 27758]
          Length = 361

 Score = 42.9 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 41/235 (17%), Positives = 69/235 (29%), Gaps = 33/235 (14%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     LQ +G +  I +M      + D +   E  R    +   +
Sbjct: 11  PTGR-LHVGHYVGSLKRRVELQNSGEYDKIFIMIADAQALTDNADNPEKVRQNIIEVALD 69

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
            +                K+   + +    L  + +  +     S    N  +  E    
Sbjct: 70  YLSCG---------LDPEKSTIFIQSQVPELTELSFYYMNLVTVSRLQRNPTVKSEIQMR 120

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKL 221
             +    + F  F Y I QA D           + +G  DQ   I    ++  +  +   
Sbjct: 121 NFEASIPVGF--FTYPISQAADITAFKA---TTVPVG-EDQLPMIEQCREIVHKFNSVYG 174

Query: 222 FALTSP------------LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNI 264
            AL  P            L  T    KM K+L   I+L+          Q    +
Sbjct: 175 EALVMPKALIPENESCCRLPGTDGKAKMSKSLGNCIYLSDSE---EEVRQKIMGM 226


>gi|197106628|ref|YP_002132005.1| pseudouridine synthase, Rsu [Phenylobacterium zucineum HLK1]
 gi|196480048|gb|ACG79576.1| pseudouridine synthase, Rsu [Phenylobacterium zucineum HLK1]
          Length = 521

 Score = 42.9 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 9/77 (11%), Positives = 27/77 (35%), Gaps = 7/77 (9%)

Query: 328 DMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNE 387
           +        P   +       G  +  L+ ++G   S  +  R +    + IN  +++  
Sbjct: 135 ESGSEPGGEPGTEL------GGERIAKLLARSG-VGSRRDVERLIAEGRVAINGQVLTTP 187

Query: 388 KLQIKLQDFDSTGNIKL 404
            ++++  D  +     +
Sbjct: 188 AVKVEPGDILTVDGAVV 204


>gi|58580060|ref|YP_199076.1| tryptophanyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae
           KACC10331]
 gi|84622058|ref|YP_449430.1| tryptophanyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|188578965|ref|YP_001915894.1| tryptophanyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|58424654|gb|AAW73691.1| tryptophanyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae
           KACC10331]
 gi|84365998|dbj|BAE67156.1| Tryptophanyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|188523417|gb|ACD61362.1| tryptophanyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae PXO99A]
          Length = 429

 Score = 42.9 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 21/96 (21%), Positives = 34/96 (35%), Gaps = 18/96 (18%)

Query: 164 KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFA 223
             +  ++   F Y +L A D + +   +   +   G DQ  +I    D  +R     ++ 
Sbjct: 124 DEDAGVTAGLFMYPVLMAADIL-IFNAHKVPV---GRDQIQHIEMARDFAQRFN--HVYG 177

Query: 224 ---LTSP---------LLTTASGTKMGKTLSGAIWL 247
               T P          L    G KM K+ S  I L
Sbjct: 178 REFFTLPEGVIDEQVSTLPGLDGRKMSKSYSNTIPL 213


>gi|229012554|ref|ZP_04169728.1| Tryptophanyl-tRNA synthetase [Bacillus mycoides DSM 2048]
 gi|228748714|gb|EEL98565.1| Tryptophanyl-tRNA synthetase [Bacillus mycoides DSM 2048]
          Length = 327

 Score = 42.9 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 22/96 (22%), Positives = 34/96 (35%), Gaps = 17/96 (17%)

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLF 222
           L+ +  ++   + Y IL A D + L +     +   G DQ  +I    D+         F
Sbjct: 118 LEIDAGVNMGLYTYPILMAADIL-LFQATHVPV---GKDQIQHIEIARDIATYFN--HTF 171

Query: 223 ALTSPL-----------LTTASGTKMGKTLSGAIWL 247
            +T  L           L    G KM K+    I L
Sbjct: 172 GMTFTLPEYVIQEEGAILPGLDGRKMSKSYGNVIPL 207


>gi|313202763|ref|YP_004041420.1| RNA-binding s4 domain protein [Paludibacter propionicigenes WB4]
 gi|312442079|gb|ADQ78435.1| RNA-binding S4 domain protein [Paludibacter propionicigenes WB4]
          Length = 514

 Score = 42.9 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 12/78 (15%), Positives = 35/78 (44%), Gaps = 1/78 (1%)

Query: 338 TISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
               +  ++++ + L   +  AG   S  EA  ++++  I +N  I++   +++ L D  
Sbjct: 267 EFKKTVVDLTKPIRLNKFLANAGIC-SRREADEYIQAGVISVNGEIVTEMGVKVLLTDKV 325

Query: 398 STGNIKLSFGKKNHIICH 415
                 +   +K +++ +
Sbjct: 326 MFHEQTVRSERKVYLLLN 343


>gi|266622364|ref|ZP_06115299.1| tryptophan--tRNA ligase [Clostridium hathewayi DSM 13479]
 gi|288865916|gb|EFC98214.1| tryptophan--tRNA ligase [Clostridium hathewayi DSM 13479]
          Length = 364

 Score = 42.9 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 39/220 (17%), Positives = 66/220 (30%), Gaps = 30/220 (13%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     LQ +G    I +M      + D +   E  R    +   +
Sbjct: 11  PTGK-LHIGHYVGSLKRRVELQNSGEFDEIFIMIADAQALTDNADNPEKVRQNIIEVALD 69

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
            +                K+   + +    L  + +  +     +    N  +  E    
Sbjct: 70  YLSCG---------LDPAKSTLFIQSQIPELTELSFYYMNLVTVARLQRNPTVKSEIAMR 120

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKL 221
             +    + F  F Y I QA D           + +G  DQ   I    ++  +  +   
Sbjct: 121 NFEASIPVGF--FTYPISQAADITAFKA---TTVPVG-EDQEPMIEQTREIVRKFNSVYG 174

Query: 222 FALTSP------------LLTTASGTKMGKTLSGAIWLNK 249
            AL  P            L  T    KM K+L   I+L+ 
Sbjct: 175 EALVEPDILLPDNKACLRLPGTDGKAKMSKSLGNCIYLSD 214


>gi|325286328|ref|YP_004262118.1| tryptophanyl-tRNA synthetase [Cellulophaga lytica DSM 7489]
 gi|324321782|gb|ADY29247.1| tryptophanyl-tRNA synthetase [Cellulophaga lytica DSM 7489]
          Length = 322

 Score = 42.9 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 34/197 (17%), Positives = 59/197 (29%), Gaps = 32/197 (16%)

Query: 144 IGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQW 203
           +  FF   R+    S + +  R + ++   F Y +L A D +     YD  +   G DQ 
Sbjct: 95  LSCFFPYQRLTLAHSFKDKADRLEDVNAGLFTYPMLMAADILL----YDAEIVPVGKDQM 150

Query: 204 GNIICGIDLGERLKTPKLFALTSPL-----------LTTASGTKMGKTLSGAIWL--NKE 250
            ++    D+  R         T  L           +    GTKM K+    I L    +
Sbjct: 151 QHLEITRDVASRFH--AQLGETFVLPQGKVQEESKFIPGTDGTKMSKSKGNLINLFQTDK 208

Query: 251 MTSPYNFWQYWRNID---------DADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKI 301
                       +           D     +    TT  + E+    K        AK  
Sbjct: 209 KLRKQIMGIQTDSTPMEDPKDPEGDNVFELYKILATTEQVDEMRAKYKGGNYGYGHAK-- 266

Query: 302 IATEITTMVHGREEAEK 318
              E+  ++  +    +
Sbjct: 267 --QELFELIIDKFADAR 281


>gi|86141089|ref|ZP_01059648.1| tryptophanyl-tRNA synthetase [Leeuwenhoekiella blandensis MED217]
 gi|85833031|gb|EAQ51480.1| tryptophanyl-tRNA synthetase [Leeuwenhoekiella blandensis MED217]
          Length = 322

 Score = 42.9 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 44/279 (15%), Positives = 81/279 (29%), Gaps = 50/279 (17%)

Query: 50  HAGHLTQLML--LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIK 107
           H G+L   ++  +    +  ++    +    S+    +   E+ R          +    
Sbjct: 15  HLGNLLGAIIPAIKMANEPENESFLFIADMHSLTQIKNG--ETLRHNTYSTAATWLACGL 72

Query: 108 GIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ 167
            I  +     +       L   TW            +  FF   R+    S + +  R +
Sbjct: 73  DINKTVFYRQSDIPQTTEL---TWY-----------LSCFFPYQRLTLAHSFKDKADRLE 118

Query: 168 SLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSP 227
            ++   F Y +L A D +     YD  +   G DQ  ++    D+  R         T  
Sbjct: 119 DVNAGLFTYPMLMAADILL----YDAEIVPVGKDQSQHLEMTRDVASRFH--AQMGETFV 172

Query: 228 L-----------LTTASGTKMGKTLSGAIWL--NKEMTSPYNFWQYWRNIDDAD------ 268
           +           +    G KM K+    I +  + +            +    D      
Sbjct: 173 IPELKLHEETMYIPGTDGAKMSKSKGNTIIIFQSDKALKKQIMSIETDSTPLEDPKDPDT 232

Query: 269 --VVSFAKRLTTLPMSEIDRMAK---LQGKEINEAKKII 302
             V    K L      E+ +M K     G     AKK +
Sbjct: 233 CNVFGIYKLLA--SKDEVAQMRKNYEAGGYGYGHAKKAL 269


>gi|206968982|ref|ZP_03229937.1| putative tryptophanyl-tRNA synthetase [Bacillus cereus AH1134]
 gi|206736023|gb|EDZ53181.1| putative tryptophanyl-tRNA synthetase [Bacillus cereus AH1134]
          Length = 332

 Score = 42.9 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 47/159 (29%), Gaps = 25/159 (15%)

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLF 222
           L+ +  ++   + Y IL A D + L +     +   G DQ  +I    D+         F
Sbjct: 123 LEVDAGVNMGLYTYPILMAADIL-LFQATHVPV---GKDQIQHIEIARDIATYFN--HTF 176

Query: 223 ALTSPL-----------LTTASGTKMGKTLSGAIWL--NKEMTSPYNFWQYWRNIDDADV 269
             T  L           L    G KM K+    I L   +E      F     +    + 
Sbjct: 177 GTTFTLPEYVIQEEGAILPGLDGRKMSKSYGNVIPLFAEQEKLRKLIFKIKTDSSLPNEP 236

Query: 270 VSFAKRLT----TLPMSEID--RMAKLQGKEINEAKKII 302
                  T         EI   R     G    + KK +
Sbjct: 237 KELETLFTIYKEFATEDEIQSLREKYETGIGWGDVKKEL 275


>gi|163941005|ref|YP_001645889.1| tryptophanyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
 gi|163863202|gb|ABY44261.1| tryptophanyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
          Length = 332

 Score = 42.9 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 22/96 (22%), Positives = 34/96 (35%), Gaps = 17/96 (17%)

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLF 222
           L+ +  ++   + Y IL A D + L +     +   G DQ  +I    D+         F
Sbjct: 123 LEIDAGVNMGLYTYPILMAADIL-LFQATHVPV---GKDQIQHIEIARDIATYFN--HTF 176

Query: 223 ALTSPL-----------LTTASGTKMGKTLSGAIWL 247
            +T  L           L    G KM K+    I L
Sbjct: 177 GMTFTLPEYVIQEEGAILPGLDGRKMSKSYGNVIPL 212


>gi|297587848|ref|ZP_06946492.1| tryptophan--tRNA ligase [Finegoldia magna ATCC 53516]
 gi|297574537|gb|EFH93257.1| tryptophan--tRNA ligase [Finegoldia magna ATCC 53516]
          Length = 360

 Score = 42.9 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 54/351 (15%), Positives = 105/351 (29%), Gaps = 60/351 (17%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGH--KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +     +Q  G   K   ++    ++  + +  D+ R     + I 
Sbjct: 11  PTGK-LHLGHYVGSLKNRVIMQNKGDFDKMYVMIADAQALTDNFNNPDKVR-----ENII 64

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           E                  K    + ++   L  + +  +     S    N  +  E  +
Sbjct: 65  EVALDYLSCG-----IDPNKVTIFVQSHVEQLTELMFYYMNLVTLSRLERNPTVKAEIKQ 119

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT-- 218
                   + FL   Y I QA D       ++  +   G DQ   +    ++        
Sbjct: 120 KEFGASLPVGFL--TYPISQAADITL----FNANIVPVGEDQLPMLEQTREIVRTFNNYY 173

Query: 219 ------PKLFALTSPL---LTTASGT-KMGKTLSGAIWL-NKEMTSPYNFWQYW-----R 262
                 PK     + +   L    G  KM K+L   I+L + E          +      
Sbjct: 174 SEVLVEPKAVIPDNKICSRLPGLDGKAKMSKSLGNCIYLSDSEKDVKSKVMSMFTDPNHI 233

Query: 263 NIDD------ADVVSFAKRL-------TTLP----MSEIDRMAKLQGKEINEAKK----I 301
            I D        V ++             LP    + E+    +  G    + KK    I
Sbjct: 234 QISDPGKVEGNTVFTYLDAFCTDDDFAEFLPDYKNLDELKDHYRRGGLGDVKIKKFLNNI 293

Query: 302 IATEITTMVHGREEAEK-AATAAMECFDMSIHSQHMPTISISKDEVSRGMG 351
           +  E++ +   R+  E+            S  ++ +   ++ K + + G+ 
Sbjct: 294 LQKELSPIREKRKHYEQNIPEIFDMLLKGSEDAREVGAETLKKVKAAMGIN 344


>gi|254479483|ref|ZP_05092808.1| tryptophanyl-tRNA synthetase [Carboxydibrachium pacificum DSM
           12653]
 gi|214034587|gb|EEB75336.1| tryptophanyl-tRNA synthetase [Carboxydibrachium pacificum DSM
           12653]
          Length = 329

 Score = 42.9 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 44/297 (14%), Positives = 101/297 (34%), Gaps = 54/297 (18%)

Query: 37  TAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSII--GDPSFRDESRRMM 94
             + G   +   +H G+    M  F   +  +     +    ++    DP         +
Sbjct: 5   RVFSGVQPSGD-IHIGNYLGAMRQFVALQDDYDCFFCVVDLHALTVPQDP-------VEL 56

Query: 95  RSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRML 154
           +   I+     +       I     K    + ++ +    + ++  L+ I  F  ++RM 
Sbjct: 57  KKNTIELAALYMA------IGLDPKKVTLFVQSHVSAHAELAWL--LQCITYFGELSRMT 108

Query: 155 SFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
                + + K ++S+S   F Y  L A D + L K +   +   G DQ  ++    D+ +
Sbjct: 109 Q---FKEKSKGKESVSVGLFTYPDLMAADIL-LYKTHYVPV---GEDQKQHLELTRDVAQ 161

Query: 215 RLKT--PKLFALTSPLLTTASG---------TKMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
           R      + F +  P++               KM K+ +        +  P   ++    
Sbjct: 162 RFNNRFGETFVIPEPMILKFGARIMSLTNPTKKMSKSDADPNNRVNLLDDPDTIYRKIMK 221

Query: 264 -IDDAD---------------VVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
            + D++               +++     T + + E+  + K +G+     KK +A 
Sbjct: 222 AVTDSESEIRLDWEKKPGISNLLTIYSLFTGMEVDEV--VNKFKGQGYGTLKKELAE 276


>gi|189461637|ref|ZP_03010422.1| hypothetical protein BACCOP_02296 [Bacteroides coprocola DSM 17136]
 gi|189431667|gb|EDV00652.1| hypothetical protein BACCOP_02296 [Bacteroides coprocola DSM 17136]
          Length = 364

 Score = 42.9 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 39/231 (16%), Positives = 67/231 (29%), Gaps = 44/231 (19%)

Query: 44  LTASSLHAGHLTQLMLLFW---LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH      L     LQ +G      +            +  +  +   ++++
Sbjct: 13  PTGK-LHIGHYVG--SLRRRVELQNSGLYDKIFVFEA-------DGQALTDNIDNPEKVR 62

Query: 101 ENIEKIKGIFSSFIKY-----GTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLS 155
           +N+          + Y        K+   + +    LC + +   +  +           
Sbjct: 63  QNV------IEVALDYLAAGLDPAKSTIFIQSQIPELCELSFY-FMDLVTVSRLQRNPTV 115

Query: 156 FESVRSR-LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQ------------ 202
              ++ R  +    + F  F Y I QA D           + +G  DQ            
Sbjct: 116 KTEIQMRNFETSIPVGF--FTYPISQAADIAAFKA---TTVPVG-EDQEPMIEQTREIVR 169

Query: 203 WGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTS 253
             N I G  L E        A    L  T    KM K+L   I+L+     
Sbjct: 170 RFNHIYGETLVEPEILLPDNAACMRLPGTDGKAKMSKSLGNCIYLSDSADE 220


>gi|156033113|ref|XP_001585393.1| hypothetical protein SS1G_13632 [Sclerotinia sclerotiorum 1980]
 gi|154699035|gb|EDN98773.1| hypothetical protein SS1G_13632 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 426

 Score = 42.9 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 13/61 (21%), Positives = 21/61 (34%), Gaps = 1/61 (1%)

Query: 15  RGFIHQISNPR-ELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           R  +    +    L           Y G   ++ S+H GH+       WLQ     P+ +
Sbjct: 79  RNLVFSHRDLDWILSRHEKGEPFFLYTGRGPSSDSMHLGHMVPFTFTKWLQDVFDVPLVI 138

Query: 74  M 74
           M
Sbjct: 139 M 139


>gi|213964800|ref|ZP_03392999.1| tryptophanyl-tRNA synthetase [Corynebacterium amycolatum SK46]
 gi|213952336|gb|EEB63719.1| tryptophanyl-tRNA synthetase [Corynebacterium amycolatum SK46]
          Length = 351

 Score = 42.9 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 43/257 (16%), Positives = 88/257 (34%), Gaps = 30/257 (11%)

Query: 24  PRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGD 83
           P   +   S        G   TA S H G+    +  +   +        +    +I  +
Sbjct: 7   PEATNPAPSARKQRVLSGIQPTADSYHLGNYLGALKNWINLQDDFDAYYFIPDLHAITVE 66

Query: 84  PSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLRE 143
            + ++     +R + I    + I       +     K+   + ++      + +  +L  
Sbjct: 67  QNPKE-----LRQRTIAGAAQLIA------LGIDPEKSVLFVQSHVPEHAELGW--VLTC 113

Query: 144 IGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQW 203
           +  F   +RM  F+   SR +  +  S   F Y +L A D + L +     +   G DQ 
Sbjct: 114 LTGFGEASRMTQFKDKSSR-QGAEHTSAGLFAYPMLMAADIL-LYRPQLVPV---GEDQR 168

Query: 204 GNIICGIDLGERLKT--PKLFALTSPLLTTASGT---------KMGKTLSGAIWLNKEMT 252
            ++    +L +R  +   K F +  P +   S           KM K+ +    +   + 
Sbjct: 169 QHLELTRNLAQRFNSRYKKTFVVPDPHIMEGSAKIYDLQDPTSKMSKSGANPKGIINLLD 228

Query: 253 SPYNFWQYWRN-IDDAD 268
            P    +  R+ + D D
Sbjct: 229 DPKVSAKRIRSAVTDND 245


>gi|196007400|ref|XP_002113566.1| hypothetical protein TRIADDRAFT_50361 [Trichoplax adhaerens]
 gi|190583970|gb|EDV24040.1| hypothetical protein TRIADDRAFT_50361 [Trichoplax adhaerens]
          Length = 406

 Score = 42.9 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 7/63 (11%)

Query: 15  RGFIHQISNPRELDILC----SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           RG      + RELD +     ++     Y G   ++ +LH GHL   +   WLQ+    P
Sbjct: 70  RGLFF---SHRELDQILTLHENKKPFYLYTGRGPSSGALHIGHLIPFLFTKWLQEAFDVP 126

Query: 71  ISL 73
           + +
Sbjct: 127 LIV 129


>gi|302386821|ref|YP_003822643.1| tryptophanyl-tRNA synthetase [Clostridium saccharolyticum WM1]
 gi|302197449|gb|ADL05020.1| tryptophanyl-tRNA synthetase [Clostridium saccharolyticum WM1]
          Length = 363

 Score = 42.9 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 40/221 (18%), Positives = 65/221 (29%), Gaps = 32/221 (14%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     LQ +G    I +M      + D +   E  R    +   +
Sbjct: 11  PTGK-LHIGHYVGSLKRRVELQNSGEFDEIFIMIADAQALTDNADNPEKVRQNIIEVALD 69

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIG-SFFSVNRMLSFESVR 160
            +                K    + +    L  + +   +  +  S    N  +  E   
Sbjct: 70  YLSCG---------LDPEKCTLFIQSQIPELTELSFY-FMNLVTVSRLQRNPTVKSEIAM 119

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
              +    + F  F Y I QA D       +       G DQ   I    ++  +  +  
Sbjct: 120 RNFETSIPVGF--FTYPISQAADITA----FQATTVPVGEDQEPMIEQTREIVRKFNSVY 173

Query: 221 LFALTSP------------LLTTASGTKMGKTLSGAIWLNK 249
             AL  P            L  T    KM K+L   I+L+ 
Sbjct: 174 GDALVEPEILLPNNKACLRLPGTDGKAKMSKSLGNCIYLSD 214


>gi|297243246|ref|ZP_06927181.1| tryptophanyl-tRNA synthetase [Gardnerella vaginalis AMD]
 gi|296888780|gb|EFH27517.1| tryptophanyl-tRNA synthetase [Gardnerella vaginalis AMD]
          Length = 363

 Score = 42.9 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 37/256 (14%), Positives = 76/256 (29%), Gaps = 42/256 (16%)

Query: 22  SNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSI 80
           S+     +  S    T   G   T   LH GH    +     +Q+ G K   ++      
Sbjct: 25  SDATLEKLKASPSSFTMLTGDRPTGR-LHLGHYFGSIRERVAMQQRGVKTNIIIADY--- 80

Query: 81  IGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY----GTGKTDALMLNNETWLCSIK 136
                      +++  ++  E+IE    + +  + Y       +   +  ++     +  
Sbjct: 81  -----------QVITDRDTTEHIE--DNVLNLVLDYMAAGIDPEKTMIFTHSAVPAANQL 127

Query: 137 YIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDFVELAKNYDCRL 195
            +  L  +             +V+S ++    +L+ L   Y + QA D   L    +   
Sbjct: 128 MLPFLSLVTEAELHRNP----TVKSEMESSGHALTGLLLTYPVHQACD--ILFCKANVV- 180

Query: 196 QMGGSDQWGNIICGIDLGERLKT----------PKLFALTS-PLLTTASGTKMGKTLSGA 244
              G D   ++     +  R                  L+  P +    G KM K+   +
Sbjct: 181 -PIGKDNLPHVEITRTIARRFNERYAKKNPVFPEPAAILSDAPEIPGLDGRKMSKSYGNS 239

Query: 245 IWLNKEMTSPYNFWQY 260
           I L           + 
Sbjct: 240 IMLGATAEETAKLIKK 255


>gi|295425708|ref|ZP_06818395.1| tryptophan--tRNA ligase [Lactobacillus amylolyticus DSM 11664]
 gi|295064724|gb|EFG55645.1| tryptophan--tRNA ligase [Lactobacillus amylolyticus DSM 11664]
          Length = 342

 Score = 42.9 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 40/222 (18%), Positives = 71/222 (31%), Gaps = 31/222 (13%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     LQ  G + P  ++    ++       D +R     ++IQ 
Sbjct: 12  PTGK-LHIGHYIGSLKNRVKLQNEGKYDPYIMIADTQAL------TDNAR---DPEKIQN 61

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
           ++ ++  +    +     K+   + +    L  +    +     S    N  +  E  + 
Sbjct: 62  SLIQV-ALDYLAVGLDPKKSTIFVQSQIPALFELTAYYMDLVTVSRLERNPTVKTEIKQK 120

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP-K 220
                  + FL  NY + QA D       +   L   G DQ   I    ++         
Sbjct: 121 GFNDSIPVGFL--NYPVSQAADITA----FKATLVPVGDDQEPMIEQAREIVRTFNRVYD 174

Query: 221 LFALTSPL----------LTTASGT-KMGKTLSGAIWLNKEM 251
              L  P           L    G  KM K+L   I+L+ + 
Sbjct: 175 CDVLVEPKGFFPPKGSGRLPGLDGNAKMSKSLGNCIYLSDDA 216


>gi|224457695|ref|ZP_03666168.1| tryptophanyl-tRNA synthetase [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|254875377|ref|ZP_05248087.1| tryptophanyl-tRNA synthetase [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|254841376|gb|EET19812.1| tryptophanyl-tRNA synthetase [Francisella tularensis subsp.
           tularensis MA00-2987]
          Length = 226

 Score = 42.9 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 25/101 (24%), Positives = 39/101 (38%), Gaps = 18/101 (17%)

Query: 166 EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL--------GERLK 217
           ++ ++   FNY +L A D +     +D  L   G DQ  +I    D+         + + 
Sbjct: 128 DKGITMGLFNYPVLMAADILI----FDADLVPVGKDQIQHIEIARDIANRFNHIYQKPVL 183

Query: 218 TPKLFALTS---PLLTTASGTKMGKTLSGAI--WLNKEMTS 253
                ALTS     +    G KM K+       +LN E T 
Sbjct: 184 KAPQ-ALTSEDSQTILGLDGRKMSKSYDNTYSHFLNGEKTR 223


>gi|169351334|ref|ZP_02868272.1| hypothetical protein CLOSPI_02114 [Clostridium spiroforme DSM 1552]
 gi|169291556|gb|EDS73689.1| hypothetical protein CLOSPI_02114 [Clostridium spiroforme DSM 1552]
          Length = 357

 Score = 42.9 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 41/243 (16%), Positives = 74/243 (30%), Gaps = 49/243 (20%)

Query: 44  LTASSLHAGHLTQLMLLFW---LQKTGH--KPISLMGGGTSIIGDPSFRDESRRMMRSQE 98
            T   LH GH      L     LQ +G+  +   ++    ++  +    ++ RR      
Sbjct: 11  PTGR-LHLGHYVG--SLRRRVELQNSGNFDEIYIMIADSQALTDNADNPEKVRR-----N 62

Query: 99  IQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLS--- 155
           I E       +          K+   + +           +      +  +V+R+     
Sbjct: 63  ILEVALDYMSVG-----LDPEKSTMFIQS-----QVPALFEFTAYYMNLVTVSRLQRNPT 112

Query: 156 -FESVRSR-LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQW---------- 203
             E ++ R  +    + FL  NY + QA D       +D      G DQ           
Sbjct: 113 IKEEIKQRGFETSIPVGFL--NYPVSQAADITA----FDATCVPVGEDQMPLIEQTKEIV 166

Query: 204 --GNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYW 261
              N I G  L E         +   L       KM K++   I+L+    S     +  
Sbjct: 167 HSFNRIYGDVLVEPKIMLSENEVCQRLPGIDGKAKMSKSIGNCIYLS---DSSEEVKKKV 223

Query: 262 RNI 264
            ++
Sbjct: 224 MSM 226


>gi|154505113|ref|ZP_02041851.1| hypothetical protein RUMGNA_02626 [Ruminococcus gnavus ATCC 29149]
 gi|153794592|gb|EDN77012.1| hypothetical protein RUMGNA_02626 [Ruminococcus gnavus ATCC 29149]
          Length = 362

 Score = 42.9 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 48/270 (17%), Positives = 76/270 (28%), Gaps = 52/270 (19%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN 102
            T   LH GH    +     LQ TG      +     +I D      +      +++++ 
Sbjct: 11  PTGR-LHVGHYVGSLKRRVELQNTGDFDEMFV-----MIADAQ--ALTDNADNPEKVRQ- 61

Query: 103 IEKIKGIFSSFIKY-----GTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFE 157
                 I    + Y        K    + +    LC + +  +     S    N  +  E
Sbjct: 62  -----NIIEVALDYLACGLDPQKCTLFIQSQIPQLCELSFYYMNLVTVSRLQRNPTVKSE 116

Query: 158 SVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQ------------WGN 205
                 +    + F  F Y I QA D      N    +   G DQ              N
Sbjct: 117 IQMRNFEASIPVGF--FTYPISQAADITAFKAN----VVPVGEDQLPMLEQTKEIVRKFN 170

Query: 206 IICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNID 265
            + G  L E             L  T    KM K+L   I+L++E               
Sbjct: 171 SVYGDTLVEPEILLPENQACLRLPGTDGKAKMSKSLGNCIYLSEE--------------P 216

Query: 266 DADVVSFAKRLTTLPMSEIDRMAKLQGKEI 295
           D          T     ++    KL+G  +
Sbjct: 217 DEIQKKVFGMFTDPTHIKVSDPGKLEGNTV 246


>gi|146298751|ref|YP_001193342.1| tryptophanyl-tRNA synthetase [Flavobacterium johnsoniae UW101]
 gi|146153169|gb|ABQ04023.1| tryptophanyl-tRNA synthetase [Flavobacterium johnsoniae UW101]
          Length = 324

 Score = 42.9 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 26/125 (20%), Positives = 43/125 (34%), Gaps = 15/125 (12%)

Query: 144 IGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQW 203
           +  FF   R+    S + +  R   ++   F Y +L A D +     YD      G DQ 
Sbjct: 95  LSCFFPFQRLTLAHSFKDKADRLDDVNAGLFTYPMLMAADILL----YDAEFVPVGKDQL 150

Query: 204 GNIICGIDLGERLKTPKLFALTSP---------LLTTASGTKMGKTLSGA--IWLNKEMT 252
            +I    D+  R           P         L+   +G KM K+ +    I+L+ +  
Sbjct: 151 QHIEITRDVASRFNHQMGETFVLPEAKIQEDSKLIPGTNGGKMSKSANNYINIFLDDKAL 210

Query: 253 SPYNF 257
                
Sbjct: 211 RKQIM 215


>gi|42527096|ref|NP_972194.1| tryptophanyl-tRNA synthetase II [Treponema denticola ATCC 35405]
 gi|41817520|gb|AAS12105.1| tryptophanyl-tRNA synthetase, putative [Treponema denticola ATCC
           35405]
          Length = 357

 Score = 42.9 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 35/238 (14%), Positives = 68/238 (28%), Gaps = 31/238 (13%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGH--KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +     LQ +G   +   ++    +   +    ++ R  +    + 
Sbjct: 11  PTGK-LHIGHYVGSLKNRVALQNSGKYDEIYIMIADAQATTDNADNLEKVRTSVIEVALD 69

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
                I    S+ +          +      L ++  ++         +V   +      
Sbjct: 70  YLACGIDPQKSTILVQTQIPELCELTFYYMNLVTLARLE------RNPTVKNEIKLRGFN 123

Query: 161 SRLKRE--QSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQW------------GNI 206
           + +       +      Y I QA D      N    + +G  DQ              N 
Sbjct: 124 TGVNAGGNTGIPVGFLTYPISQAADITAFLAN---TVPVG-EDQMPMIEQTREIVRSFNS 179

Query: 207 ICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNI 264
           + G  L E  +          L  T    KM K+L   I+++    SP    +    +
Sbjct: 180 LYGETLVEPKELLPANKTCGRLPGTDGKAKMSKSLGNCIYIS---DSPEEIKKKVMGM 234


>gi|126697668|ref|YP_001086565.1| 30S ribosomal protein S4 [Clostridium difficile 630]
 gi|254973759|ref|ZP_05270231.1| 30S ribosomal protein S4 [Clostridium difficile QCD-66c26]
 gi|255091149|ref|ZP_05320627.1| 30S ribosomal protein S4 [Clostridium difficile CIP 107932]
 gi|255099260|ref|ZP_05328237.1| 30S ribosomal protein S4 [Clostridium difficile QCD-63q42]
 gi|255305043|ref|ZP_05349215.1| 30S ribosomal protein S4 [Clostridium difficile ATCC 43255]
 gi|255312803|ref|ZP_05354386.1| 30S ribosomal protein S4 [Clostridium difficile QCD-76w55]
 gi|255515562|ref|ZP_05383238.1| 30S ribosomal protein S4 [Clostridium difficile QCD-97b34]
 gi|255648657|ref|ZP_05395559.1| 30S ribosomal protein S4 [Clostridium difficile QCD-37x79]
 gi|255654190|ref|ZP_05399599.1| 30S ribosomal protein S4 [Clostridium difficile QCD-23m63]
 gi|260681874|ref|YP_003213159.1| 30S ribosomal protein S4 [Clostridium difficile CD196]
 gi|260685472|ref|YP_003216605.1| 30S ribosomal protein S4 [Clostridium difficile R20291]
 gi|296449771|ref|ZP_06891540.1| 30S ribosomal protein S4 [Clostridium difficile NAP08]
 gi|296877835|ref|ZP_06901857.1| 30S ribosomal protein S4 [Clostridium difficile NAP07]
 gi|122974220|sp|Q18CI6|RS4_CLOD6 RecName: Full=30S ribosomal protein S4
 gi|115249105|emb|CAJ66916.1| 30S ribosomal protein S4 [Clostridium difficile]
 gi|260208037|emb|CBA60237.1| 30S ribosomal protein S4 [Clostridium difficile CD196]
 gi|260211488|emb|CBE01627.1| 30S ribosomal protein S4 [Clostridium difficile R20291]
 gi|296261369|gb|EFH08195.1| 30S ribosomal protein S4 [Clostridium difficile NAP08]
 gi|296431135|gb|EFH16960.1| 30S ribosomal protein S4 [Clostridium difficile NAP07]
          Length = 207

 Score = 42.5 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 21/118 (17%), Positives = 44/118 (37%), Gaps = 30/118 (25%)

Query: 292 GKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMG 351
           G ++ E +K+        ++G  E +         ++    +++MP           G  
Sbjct: 54  GLQLREKQKV------KRIYGVLETQ-----FRNLYER---AENMPG--------KAGEN 91

Query: 352 LLTLI--------VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
           LL+L+         + G A+S  EAR+ +      +N + +    L +K+ D      
Sbjct: 92  LLSLLERRLDNVVYRMGLASSRKEARQLVTHGHFTLNGNKVDIPSLIVKVGDVIEVKE 149


>gi|308048052|ref|YP_003911618.1| tryptophanyl-tRNA synthetase [Ferrimonas balearica DSM 9799]
 gi|307630242|gb|ADN74544.1| tryptophanyl-tRNA synthetase [Ferrimonas balearica DSM 9799]
          Length = 335

 Score = 42.5 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 33/200 (16%), Positives = 69/200 (34%), Gaps = 37/200 (18%)

Query: 140 LLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGG 199
           +L        +NRM  F+   +R     +     F+Y +L A D + L +  +  +   G
Sbjct: 94  ILNCYTQMGELNRMTQFKDKSARHASNINAGL--FSYPVLMAADIL-LYQANEVPV---G 147

Query: 200 SDQWGNIICGIDLGERLKTPKLFALTSP----------LLTTAS-GTKMGKTLSGA---I 245
           +DQ  ++    D+  R         T P          +++      KM K+   A   +
Sbjct: 148 NDQKQHLELARDIATRFNNLYGDVFTVPEPHIPEAGARVMSLQDPSKKMSKSDDNANNRV 207

Query: 246 WLNKEMTSPYNFWQYWRNIDDA---------------DVVSFAKRLTTLPMSEIDRMAKL 290
            L ++  +    ++      D                +++S     +    +EI+  A+ 
Sbjct: 208 GLLEDPKTITKKFKKAVTDSDEPPVVRFDLDNKAGVSNLMSIYSATSGKSFAEIE--AEF 265

Query: 291 QGKEINEAKKIIATEITTMV 310
           +GK     K   A  +  ++
Sbjct: 266 EGKMYGHLKVATAESVVALL 285


>gi|307292742|ref|ZP_07572588.1| RNA-binding S4 domain protein [Sphingobium chlorophenolicum L-1]
 gi|306880808|gb|EFN12024.1| RNA-binding S4 domain protein [Sphingobium chlorophenolicum L-1]
          Length = 267

 Score = 42.5 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 9/46 (19%), Positives = 18/46 (39%), Gaps = 1/46 (2%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
           +    +  L+ +AG   S  E  R ++   I +N   I+     + 
Sbjct: 26  NEPQRIAKLLARAG-VASRREVERMIEEGRITLNGEAITTPATLLA 70


>gi|303233613|ref|ZP_07320270.1| tryptophan--tRNA ligase [Finegoldia magna BVS033A4]
 gi|302495282|gb|EFL55031.1| tryptophan--tRNA ligase [Finegoldia magna BVS033A4]
          Length = 360

 Score = 42.5 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 54/351 (15%), Positives = 105/351 (29%), Gaps = 60/351 (17%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGH--KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +     +Q  G   K   ++    ++  + +  D+ R     + I 
Sbjct: 11  PTGK-LHLGHYVGSLKNRVIMQNKGDFDKMYVMIADAQALTDNFNNPDKVR-----ENII 64

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           E                  K    + ++   L  + +  +     S    N  +  E  +
Sbjct: 65  EVALDYLSCG-----IDPNKVTIFVQSHVEQLTELMFYYMNLVTLSRLERNPTVKAEIKQ 119

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT-- 218
                   + FL   Y I QA D       ++  +   G DQ   +    ++        
Sbjct: 120 KEFGASLPVGFL--TYPISQAADITL----FNANIVPVGEDQLPMLEQTREIVRTFNNYY 173

Query: 219 ------PKLFALTSPL---LTTASGT-KMGKTLSGAIWL-NKEMTSPYNFWQYW-----R 262
                 PK     + +   L    G  KM K+L   I+L + E          +      
Sbjct: 174 SEVLVEPKAVIPDNKICSRLPGLDGKAKMSKSLGNCIYLSDSEKDVKSKVMSMFTDPNHI 233

Query: 263 NIDD------ADVVSFAKRL-------TTLP----MSEIDRMAKLQGKEINEAKK----I 301
            I D        V ++             LP    + E+    +  G    + KK    I
Sbjct: 234 QISDPGKVEGNAVFTYLDAFCVDDDFSEFLPEYKNLDELKDHYRRGGLGDVKIKKFLNNI 293

Query: 302 IATEITTMVHGREEAEK-AATAAMECFDMSIHSQHMPTISISKDEVSRGMG 351
           +  E++ +   R+  E+            S  ++ +   ++ K + + G+ 
Sbjct: 294 LQKELSPIREKRKHYEQNIPEIFDMLLKGSEDAREVGAETLKKVKAAMGIN 344


>gi|289423095|ref|ZP_06424910.1| hemolysin A [Peptostreptococcus anaerobius 653-L]
 gi|289156426|gb|EFD05076.1| hemolysin A [Peptostreptococcus anaerobius 653-L]
          Length = 292

 Score = 42.5 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 13/56 (23%), Positives = 25/56 (44%), Gaps = 3/56 (5%)

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEK--LQIKLQDFDSTGNI-KLSFG 407
           L+V  G+  S  +ARR + +  + +NN  +      ++I  +       I  +S G
Sbjct: 8   LLVDFGYFASREQARRTIMAGNVFVNNQRVDKPGTAVKIDSEILVKGKQIPYVSRG 63


>gi|218232880|ref|YP_002368058.1| tryptophanyl-tRNA synthetase [Bacillus cereus B4264]
 gi|218160837|gb|ACK60829.1| putative tryptophanyl-tRNA synthetase [Bacillus cereus B4264]
          Length = 332

 Score = 42.5 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 22/96 (22%), Positives = 33/96 (34%), Gaps = 17/96 (17%)

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLF 222
           L+ +  ++   + Y IL A D + L +     +   G DQ  +I    D+         F
Sbjct: 123 LEVDAGVNMGVYTYPILMAADIL-LFQATHVPV---GKDQIQHIEIARDIATYFN--HTF 176

Query: 223 ALTSPL-----------LTTASGTKMGKTLSGAIWL 247
             T  L           L    G KM K+    I L
Sbjct: 177 GTTFTLPEYVIQEEGAILPGLDGRKMSKSYGNVIPL 212


>gi|238898713|ref|YP_002924394.1| tryptophanyl-tRNA synthetase [Candidatus Hamiltonella defensa 5AT
           (Acyrthosiphon pisum)]
 gi|229466472|gb|ACQ68246.1| tryptophanyl-tRNA synthetase [Candidatus Hamiltonella defensa 5AT
           (Acyrthosiphon pisum)]
          Length = 340

 Score = 42.5 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 37/190 (19%), Positives = 66/190 (34%), Gaps = 37/190 (19%)

Query: 150 VNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICG 209
           +NRM  F+   SR     +   L  NY +L A D + L + +   +   G DQ  ++   
Sbjct: 109 LNRMTQFKDKSSRHSENMNAGLL--NYPVLMAADIL-LYQTHQVPV---GEDQKQHLELA 162

Query: 210 IDLGERLKT--PKLFALTSPLLTTAS---------GTKMGKT---LSGAIWLNKEMTSPY 255
            D+ +R       +F +  P +  +            KM K+    +  I L ++  +  
Sbjct: 163 RDIAKRFNGIYGDIFVIPEPFIAQSGARIMSLQEPNKKMSKSDENRNNVIELLEDPENII 222

Query: 256 NFWQYWRNIDDADVVSFAK---------RLTTLP------MSEIDRMAKLQGKEINEAKK 300
              +      D     +            L  L       MSE+++     GK     K 
Sbjct: 223 KKIKKAMTDSDEPAQIYYDIKNKPGVSNLLDILSGVVNKNMSELEKNFS--GKMYGHLKT 280

Query: 301 IIATEITTMV 310
            +A  +T M+
Sbjct: 281 ELAEALTHML 290


>gi|289423107|ref|ZP_06424922.1| isoleucine--tRNA ligase [Peptostreptococcus anaerobius 653-L]
 gi|289156438|gb|EFD05088.1| isoleucine--tRNA ligase [Peptostreptococcus anaerobius 653-L]
          Length = 1041

 Score = 42.5 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 22/112 (19%), Positives = 40/112 (35%), Gaps = 19/112 (16%)

Query: 169 LSFLEFNYMILQAYDFVELA-KNYDCRLQMGGSDQ---WGNIICGIDLGERLKTPKLFAL 224
           + F +++Y      DF +L   +Y C     G DQ   W   +  +      K P    L
Sbjct: 531 MPFAQWHYPFEHKEDFDQLFPADYICE----GIDQTRGWFYSLLAVSTFVTGKAPYKNVL 586

Query: 225 TSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRL 276
            + L+   +G KM K+    I       +P+  +  +      D + +    
Sbjct: 587 VTDLVLDKNGKKMSKSKGNTI-------NPFEMFDKY----GVDALRWYLLY 627


>gi|54022903|ref|YP_117145.1| tryptophanyl-tRNA synthetase [Nocardia farcinica IFM 10152]
 gi|54014411|dbj|BAD55781.1| putative tryptophanyl-tRNA synthetase [Nocardia farcinica IFM
           10152]
          Length = 343

 Score = 42.5 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 35/244 (14%), Positives = 82/244 (33%), Gaps = 29/244 (11%)

Query: 31  CSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDES 90
            ++       G   T++S H G+    +  +   +  +  +  +    +I      +   
Sbjct: 9   AAERKQRVLSGIQPTSNSFHLGNYLGALQYWVGMQDDYDALYFIPDMHAITVAQEPK--- 65

Query: 91  RRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSV 150
                  +++           +       ++   + +       + +  +L  I  F   
Sbjct: 66  -------QLRARTRAAAAQLLAIG-IDPKRSTLFVQSQVPQHAELAW--VLSCITGFGEA 115

Query: 151 NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGI 210
           +RM  F+   +R   + +   L F Y +L A D + L + +   +   G DQ  ++    
Sbjct: 116 SRMTQFKDKSARHGADNATVGL-FTYPVLMAADIL-LYRPHQVPV---GEDQRQHLELTR 170

Query: 211 DLGERLKT--------PKLFAL--TSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQ 259
           +L +R  T        P+   +  T+ +      T KM K+ +    L   +  P    +
Sbjct: 171 NLAQRFNTRFKKTFVVPEAHIVKGTAKIYDLQDPTSKMSKSAASDAGLINLLDDPKVSAK 230

Query: 260 YWRN 263
             R+
Sbjct: 231 KIRS 234


>gi|328884561|emb|CCA57800.1| Tryptophanyl-tRNA synthetase [Streptomyces venezuelae ATCC 10712]
          Length = 337

 Score = 42.5 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 47/296 (15%), Positives = 96/296 (32%), Gaps = 45/296 (15%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   TA S H G+    +  +   +  H    ++    + I  P    E R         
Sbjct: 11  GIQPTAGSFHLGNYLGAVRQWVALQETHDAFYMVVDLHA-ITVPQDPAELR--------- 60

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLS-FESV 159
               ++             +    + ++      + +  ++  +  F   +RM    +  
Sbjct: 61  -ANTRLAAAQLLAAGLDPERCTLFVQSHVPEHAQLGW--VMNCLTGFGEASRMTQFKDKS 117

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT- 218
             +     ++    F Y ILQ  D + L +     +   G DQ  +I    DL ER    
Sbjct: 118 AKQGADRATVGL--FTYPILQVADIL-LYQANQVPV---GEDQRQHIELTRDLAERFNGR 171

Query: 219 -PKLFALTSPLLTTASGT---------KMGKTLSGAIWLNKEMTSPYNFWQYWRN-IDDA 267
             + F + +P +   +           KM K+ S    L   +  P    +  ++ + D 
Sbjct: 172 FGETFTIPAPYILKETAKIYDLQDPAIKMSKSASTPKGLINLLDDPKTTAKKVKSAVTDT 231

Query: 268 D------------VVSFAKRLTTLPMSEIDRMAKL-QGKEINEAKKIIATEITTMV 310
           +            V +    ++TL  + ++ + K  +GK     K  +A  +   V
Sbjct: 232 ETVIRFDPENKAGVSNLLTIMSTLTATSVEDLEKSYEGKMYGALKTDLAEVMVDFV 287


>gi|167627367|ref|YP_001677867.1| tryptophanyl-tRNA synthetase [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
 gi|241667924|ref|ZP_04755502.1| tryptophanyl-tRNA synthetase [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254876464|ref|ZP_05249174.1| tryptophanyl-tRNA synthetase [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|167597368|gb|ABZ87366.1| Tryptophan--tRNA ligase [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
 gi|254842485|gb|EET20899.1| tryptophanyl-tRNA synthetase [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
          Length = 334

 Score = 42.5 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 23/90 (25%), Positives = 34/90 (37%), Gaps = 14/90 (15%)

Query: 166 EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT------- 218
           ++ ++   FNY +L A D +     +D  L   G DQ  +I    D+  R          
Sbjct: 128 DKGITMGLFNYPVLMAADIMM----FDADLVPVGKDQIQHIEIARDIANRFNHIYKNQIL 183

Query: 219 PKLFALTS---PLLTTASGTKMGKTLSGAI 245
               ALTS     +    G KM K+    I
Sbjct: 184 KAPQALTSEDSQTILGLDGRKMSKSYDNTI 213


>gi|116250171|ref|YP_766009.1| tryptophanyl-tRNA synthetase [Rhizobium leguminosarum bv. viciae
           3841]
 gi|115254819|emb|CAK05893.1| putative tryptophanyl-tRNA synthetase [Rhizobium leguminosarum bv.
           viciae 3841]
          Length = 354

 Score = 42.5 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 58/377 (15%), Positives = 118/377 (31%), Gaps = 94/377 (24%)

Query: 31  CSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDES 90
            ++     + G   T + LH G+    +  F   + G+  I  +    +           
Sbjct: 1   MNEFKKLVFSGVQPTGN-LHLGNYLGAIRRFVALQEGNDCIYCVVDMHA----------- 48

Query: 91  RRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFS- 149
              + +Q + E++       ++         +  ++ N++ +     +  +    +    
Sbjct: 49  ---LTAQLVHEDMPSQTRSIAAAFIAAGIDPEKHIVFNQSAVPQHAELAWIFNCVARIGW 105

Query: 150 VNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICG 209
           +NRM  F+    + + + SL    + Y  L A D + + +     +   G DQ  ++   
Sbjct: 106 MNRMTQFKDKAGKDREQASLGL--YAYPSLMAADIL-VYRATHVPV---GEDQKQHLELA 159

Query: 210 IDLG-------------------ERLKTPKLFA---LTSPLLTTA--------SGT-KMG 238
            D+                      +    + A   +  PL+            GT KM 
Sbjct: 160 RDIAMKFNLDYAEHISRTGYGVDITVGNEPVHAYFPMVEPLIGGPAPRVMSLRDGTKKMS 219

Query: 239 KTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEA 298
           K+             P +       +DD D +S                     K+I +A
Sbjct: 220 KS------------DPSDL-SRINLMDDEDAIS---------------------KKIRKA 245

Query: 299 KKI---IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTL 355
           K     + +EI  +  GR EA+          D S  +  +      +  V +   L+ L
Sbjct: 246 KTDPDGLPSEIDGL-QGRPEADNLVAIYAALADKS-KADVLAEFGGQQFSVFKPA-LVDL 302

Query: 356 IVKAGFATSTNEARRHL 372
            +    A  T E RR +
Sbjct: 303 AINV-LAPITGEMRRLM 318


>gi|91779682|ref|YP_554890.1| tryptophanyl-tRNA synthetase II [Burkholderia xenovorans LB400]
 gi|91692342|gb|ABE35540.1| tryptophanyl-tRNA synthetase [Burkholderia xenovorans LB400]
          Length = 342

 Score = 42.5 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 38/219 (17%), Positives = 63/219 (28%), Gaps = 27/219 (12%)

Query: 45  TASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIE 104
           T   LH GH    +      +   +   L+    ++       +  R    ++ + E   
Sbjct: 20  TGP-LHLGHYIGSLRSRVQLQHEAQQFLLLADAQAMTD-----NVGRHQKVTENVIEVAL 73

Query: 105 KIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK 164
               +          K+   + +    L  +    L     +    N  +  E V    +
Sbjct: 74  DYLAVG-----IDPAKSTIFIQSQVPELAELTQYLLNLVTVARLERNPTIKAEIVLRGFE 128

Query: 165 REQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKLF 222
           R+    FL   Y + QA D          R+ +G  DQ   I    +L  R      K  
Sbjct: 129 RDIPAGFL--TYPVSQAADITAFKA---TRVPVG-DDQLPMIEQTNELVRRFNNTVDKQV 182

Query: 223 ALTSPL-------LTTASGT-KMGKTLSGAIWLNKEMTS 253
            +           L    G  KM K+L  AI L      
Sbjct: 183 LVECEAVLSHVARLPGIDGKAKMSKSLGNAITLGASPDE 221


>gi|315037463|ref|YP_004031031.1| tryptophanyl-tRNA synthetase II [Lactobacillus amylovorus GRL 1112]
 gi|325955921|ref|YP_004286531.1| tryptophanyl-tRNA synthetase II [Lactobacillus acidophilus 30SC]
 gi|312275596|gb|ADQ58236.1| tryptophanyl-tRNA synthetase II [Lactobacillus amylovorus GRL 1112]
 gi|325332486|gb|ADZ06394.1| tryptophanyl-tRNA synthetase II [Lactobacillus acidophilus 30SC]
 gi|327182756|gb|AEA31203.1| tryptophanyl-tRNA synthetase II [Lactobacillus amylovorus GRL 1118]
          Length = 340

 Score = 42.5 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 36/225 (16%), Positives = 67/225 (29%), Gaps = 37/225 (16%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     LQ +G + P  ++    ++  +    ++ R  +    +  
Sbjct: 12  PTGK-LHIGHYIGSLKNRVKLQNSGKYDPYIMIADTQALTDNARNPEKIRNSLIQVALDY 70

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
               +             K+   + +    L  +    +     +    N  +  E  + 
Sbjct: 71  LAVGL----------DPNKSTIYVQSQIPALFELTAYYMDLVTVARLERNPTVKTEIKQK 120

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKL 221
             K    + FL  NY + QA D       +   +   G DQ   +    ++         
Sbjct: 121 DFKDSIPVGFL--NYPVSQAADITA----FKATIIPVGDDQEPMLEQTREIVRTFNR--- 171

Query: 222 FALTSPL--------------LTTASGT-KMGKTLSGAIWLNKEM 251
              T  L              L    G  KM K+L  AI+L  + 
Sbjct: 172 VYNTDILVEPKGYFPPKGQGRLPGLDGNAKMSKSLGNAIYLADDA 216


>gi|256394535|ref|YP_003116099.1| cysteinyl-tRNA synthetase [Catenulispora acidiphila DSM 44928]
 gi|310947176|sp|C7Q9B2|MSHC_CATAD RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|256360761|gb|ACU74258.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha- D-glucopyranoside
           ligase [Catenulispora acidiphila DSM 44928]
          Length = 427

 Score = 42.5 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 11/61 (18%), Positives = 20/61 (32%), Gaps = 3/61 (4%)

Query: 192 DCRLQMGGSDQWG--NIICGIDLGERLKTPK-LFALTSPLLTTASGTKMGKTLSGAIWLN 248
              LQ GGSD     + +   +            +     +    G KM K+    + ++
Sbjct: 248 GIDLQGGGSDLAFPHHEMGASEAQVVTGQRPYAHSYVHSGMVGLDGEKMSKSKGNLVLVS 307

Query: 249 K 249
           K
Sbjct: 308 K 308


>gi|121710874|ref|XP_001273053.1| tryptophanyl-tRNA synthetase [Aspergillus clavatus NRRL 1]
 gi|119401203|gb|EAW11627.1| tryptophanyl-tRNA synthetase [Aspergillus clavatus NRRL 1]
          Length = 434

 Score = 42.5 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 15/61 (24%), Positives = 22/61 (36%), Gaps = 1/61 (1%)

Query: 15  RGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG +    +    LD          Y G   ++ S+H GH        WLQ     P+ +
Sbjct: 84  RGIVFSHRDLNLILDRYEKGQPFYLYTGRGPSSDSMHVGHTIPFEFTKWLQDVFDCPLVI 143

Query: 74  M 74
           M
Sbjct: 144 M 144


>gi|227502334|ref|ZP_03932383.1| S4 domain protein [Corynebacterium accolens ATCC 49725]
 gi|227076888|gb|EEI14851.1| S4 domain protein [Corynebacterium accolens ATCC 49725]
          Length = 94

 Score = 42.5 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 11/72 (15%), Positives = 25/72 (34%), Gaps = 4/72 (5%)

Query: 336 MPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           M  ++IS + +  G  +      A    +  EA+  +   A+ +N    +     +++ D
Sbjct: 1   MLEVAISGESIKLGQFI----KLASLVGTGGEAKELIAEGAVTVNGETETRRGATLQIGD 56

Query: 396 FDSTGNIKLSFG 407
                      G
Sbjct: 57  EVCIEGTCARVG 68


>gi|57505890|ref|ZP_00371815.1| tryptophanyl-tRNA synthetase [Campylobacter upsaliensis RM3195]
 gi|57015920|gb|EAL52709.1| tryptophanyl-tRNA synthetase [Campylobacter upsaliensis RM3195]
          Length = 319

 Score = 42.5 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 33/216 (15%), Positives = 63/216 (29%), Gaps = 34/216 (15%)

Query: 41  GYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           G   +   LH G+    +  +   Q    +    +    ++    +     +  +     
Sbjct: 6   GLQPSGD-LHIGNFFGAIKPMIEAQDES-EMFIFIANYHAMTSSQNGAVLKQNAL-KAAA 62

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETW-LCSIKYIDLLREIGSFFSVNRMLSFES 158
                 +    S F      K    +     W L     + LL    S+         + 
Sbjct: 63  AFLSLGVDPQKSVFWLQSDVKEVLELY----WILSQFSPMGLLERAHSY--------KDK 110

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
           V   L     L    F+Y +L A D +     +D ++   G DQ  ++    D+  ++  
Sbjct: 111 VAKGLPSSHGL----FSYPVLMAADILL----FDTQIVPVGKDQIQHVEIARDIALKVNN 162

Query: 219 PKLFALTSP---------LLTTASGTKMGKTLSGAI 245
                 T P         ++    G KM K+    I
Sbjct: 163 EWGEIFTLPEARVSENVAVVPGTDGAKMSKSYQNTI 198


>gi|300121522|emb|CBK22041.2| Pseudouridine synthase [Blastocystis hominis]
          Length = 271

 Score = 42.5 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 11/58 (18%), Positives = 26/58 (44%), Gaps = 1/58 (1%)

Query: 341 ISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
           +  +  +  M +   I ++G   S  EA R ++   + +N  +I++  + +  QD   
Sbjct: 2   LPPNAAALSMRIAKRIARSGVC-SRREAERWIEMGRVTLNGKVITSPAINVTQQDIIH 58


>gi|50085911|ref|YP_047421.1| tryptophanyl-tRNA synthetase II [Acinetobacter sp. ADP1]
 gi|49531887|emb|CAG69599.1| tryptophanyl-tRNA synthetase [Acinetobacter sp. ADP1]
          Length = 337

 Score = 42.5 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 41/217 (18%), Positives = 67/217 (30%), Gaps = 29/217 (13%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
            T   LH GH    +      +  H    L+    ++  +    D+ RR +    +    
Sbjct: 16  PTGQ-LHLGHFVGSLRSRVGLQDSHHQHILLADAQALTDNADNPDKVRRNILEVALDYMA 74

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR- 162
             I             KT   + +    L  +  +  L  +              ++ R 
Sbjct: 75  VGI----------DPLKTTICVQSCLPALNELTML-YLNFVTVARLERNPTIKSEIQMRG 123

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT---- 218
            +R+    FL   Y + QA D       +   +   G DQ   I    ++  R+      
Sbjct: 124 FERDIPAGFL--CYPVAQAADITA----FKATVVPVGEDQIPMIEQTNEIVRRVNRQIGQ 177

Query: 219 ---PKLFALTSPL--LTTASGT-KMGKTLSGAIWLNK 249
              P+  AL S    L    G  KM K+L   I LN 
Sbjct: 178 DLLPECKALLSNTGRLPGFDGKAKMSKSLGNTIVLNA 214


>gi|296161717|ref|ZP_06844520.1| tryptophanyl-tRNA synthetase [Burkholderia sp. Ch1-1]
 gi|295888031|gb|EFG67846.1| tryptophanyl-tRNA synthetase [Burkholderia sp. Ch1-1]
          Length = 342

 Score = 42.5 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 38/219 (17%), Positives = 63/219 (28%), Gaps = 27/219 (12%)

Query: 45  TASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIE 104
           T   LH GH    +      +   +   L+    ++       +  R    ++ + E   
Sbjct: 20  TGP-LHLGHYIGSLRSRVQLQHEAQQFLLLADAQAMTD-----NVGRHQKVTENVIEVAL 73

Query: 105 KIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK 164
               +          K+   + +    L  +    L     +    N  +  E V    +
Sbjct: 74  DYLAVG-----IDPAKSTIFIQSQVPELAELTQYLLNLVTVARLERNPTIKAEIVLRGFE 128

Query: 165 REQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKLF 222
           R+    FL   Y + QA D          R+ +G  DQ   I    +L  R      K  
Sbjct: 129 RDIPAGFL--TYPVSQAADITAFKA---TRVPVG-DDQLPMIEQTNELVRRFNNTVDKQV 182

Query: 223 ALTSPL-------LTTASGT-KMGKTLSGAIWLNKEMTS 253
            +           L    G  KM K+L  AI L      
Sbjct: 183 LVECEAVLSHVARLPGIDGKAKMSKSLGNAITLGASPDE 221


>gi|149044164|gb|EDL97546.1| rCG27710, isoform CRA_a [Rattus norvegicus]
 gi|149044166|gb|EDL97548.1| rCG27710, isoform CRA_a [Rattus norvegicus]
 gi|149044167|gb|EDL97549.1| rCG27710, isoform CRA_a [Rattus norvegicus]
 gi|149044168|gb|EDL97550.1| rCG27710, isoform CRA_a [Rattus norvegicus]
          Length = 259

 Score = 42.5 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 14/60 (23%), Positives = 25/60 (41%), Gaps = 1/60 (1%)

Query: 15  RGFIHQISN-PRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +  + LD   ++     Y G   ++ ++H GHL   +   WLQ     P+ +
Sbjct: 138 RGIFFSHRDMNQILDAYENKKPFYLYTGRGPSSEAMHLGHLVPFIFTKWLQDVFDVPLVI 197


>gi|297180168|gb|ADI16390.1| ribosome-associated heat shock protein implicated in the recycling
           of the 50S subunit (s4 paralog) [uncultured bacterium
           HF130_12L15]
          Length = 129

 Score = 42.5 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 21/44 (47%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           +   +  A    S + A R ++S A+++N   I+     +K+ D
Sbjct: 9   IDKWLFFARVVKSRSLAARLVQSGAVRVNREKIAQPAFPVKVGD 52


>gi|304382274|ref|ZP_07364781.1| ribosomal large subunit pseudouridine synthase B [Prevotella
           marshii DSM 16973]
 gi|304336631|gb|EFM02860.1| ribosomal large subunit pseudouridine synthase B [Prevotella
           marshii DSM 16973]
          Length = 481

 Score = 42.5 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 13/73 (17%), Positives = 30/73 (41%), Gaps = 5/73 (6%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD--FDSTGNI 402
           + +  + L   +  AG   S  EA   +++  + +N  +I+    +I   D        +
Sbjct: 241 DPNEPIRLNKYLANAGVC-SRREADEFIQAGVVTVNGQVITELGTKIVRTDEVKFHDQPV 299

Query: 403 KLSFGKKNHIICH 415
            L   KK +++ +
Sbjct: 300 TLE--KKVYVLLN 310


>gi|86131033|ref|ZP_01049632.1| Tryptophanyl-tRNA synthetase [Dokdonia donghaensis MED134]
 gi|85818444|gb|EAQ39604.1| Tryptophanyl-tRNA synthetase [Dokdonia donghaensis MED134]
          Length = 323

 Score = 42.5 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 34/181 (18%), Positives = 59/181 (32%), Gaps = 27/181 (14%)

Query: 144 IGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQW 203
           +  FF   R+    S + +  R + ++   F Y +L A D +     YD  +   G DQ 
Sbjct: 95  LSCFFPYQRLTLAHSFKDKADRLEDVNAGLFTYPMLMAADILL----YDAEVVPVGKDQA 150

Query: 204 GNIICGIDLGERLKTP---KLFAL--------TSPLLTTASGTKMGKTLSG--AIWLNKE 250
            +I    D+  R       ++F L        T   +    G KM K+      I+L  +
Sbjct: 151 QHIEMTRDVASRFHAATKTEVFVLPEASHNEETM-YIPGTDGAKMSKSKGNIIDIFLPDK 209

Query: 251 MTSPYNFWQYWRNIDDAD--------VVSFAKRL-TTLPMSEIDRMAKLQGKEINEAKKI 301
                       +    +        V +  K L T   +  +    K        AK+ 
Sbjct: 210 KLRKQIMGIKTDSTPMEEPMETEGCNVFNLYKLLATPEQVERLRENYKRTDFGYGHAKQA 269

Query: 302 I 302
           +
Sbjct: 270 V 270


>gi|330993462|ref|ZP_08317397.1| Lysyl-tRNA synthetase [Gluconacetobacter sp. SXCC-1]
 gi|329759492|gb|EGG76001.1| Lysyl-tRNA synthetase [Gluconacetobacter sp. SXCC-1]
          Length = 508

 Score = 42.5 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 22/127 (17%), Positives = 35/127 (27%), Gaps = 15/127 (11%)

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           D+           +M G D   ++     +   L       LT  L    +G K+ K+  
Sbjct: 213 DWAMRWYALGVDYEMSGKDLIDSVRLSGRICRILGGQPPAGLTYELFLDQNGQKISKSKG 272

Query: 243 GAI----WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEA 298
             I    WL        +  QY  N          +    +     D       K     
Sbjct: 273 NGISVEEWL--RYAPAESLGQYMFNAP----QRAKRLFFDVIPKATDEYLAHVAKA---- 322

Query: 299 KKIIATE 305
            K +AT+
Sbjct: 323 -KTLATD 328


>gi|14278533|pdb|1I94|D Chain D, Crystal Structures Of The Small Ribosomal Subunit With
           Tetracycline, Edeine And If3
 gi|14278554|pdb|1I95|D Chain D, Crystal Structure Of The 30s Ribosomal Subunit From
           Thermus Thermophilus In Complex With Edeine
 gi|14278575|pdb|1I96|D Chain D, Crystal Structure Of The 30s Ribosomal Subunit From
           Thermus Thermophilus In Complex With The Translation
           Initiation Factor If3 (C-Terminal Domain)
 gi|14278597|pdb|1I97|D Chain D, Crystal Structure Of The 30s Ribosomal Subunit From
           Thermus Thermophilus In Complex With Tetracycline
 gi|20663889|pdb|1J5E|D Chain D, Structure Of The Thermus Thermophilus 30s Ribosomal
           Subunit
 gi|27065879|pdb|1N32|D Chain D, Structure Of The Thermus Thermophilus 30s Ribosomal
           Subunit Bound To Codon And Near-Cognate Transfer Rna
           Anticodon Stem-Loop Mismatched At The First Codon
           Position At The A Site With Paromomycin
 gi|27065906|pdb|1N33|D Chain D, Structure Of The Thermus Thermophilus 30s Ribosomal
           Subunit Bound To Codon And Near-Cognate Transfer Rna
           Anticodon Stem-Loop Mismatched At The Second Codon
           Position At The A Site With Paromomycin
 gi|27065933|pdb|1N34|D Chain D, Structure Of The Thermus Thermophilus 30s Ribosomal
           Subunit In The Presence Of Codon And
           Crystallographically Disordered Near-Cognate Transfer
           Rna Anticodon Stem-Loop Mismatched At The First Codon
           Position
 gi|27065959|pdb|1N36|D Chain D, Structure Of The Thermus Thermophilus 30s Ribosomal
           Subunit In The Presence Of Crystallographically
           Disordered Codon And Near-Cognate Transfer Rna Anticodon
           Stem-Loop Mismatched At The Second Codon Position
 gi|34811532|pdb|1PNS|D Chain D, Crystal Structure Of A Streptomycin Dependent Ribosome
           From E. Coli, 30s Subunit Of 70s Ribosome. This File,
           1pns, Contains The 30s Subunit, Two Trnas, And One Mrna
           Molecule. The 50s Ribosomal Subunit Is In File 1pnu.
 gi|34811588|pdb|1PNX|D Chain D, Crystal Structure Of The Wild Type Ribosome From E. Coli,
           30s Subunit Of 70s Ribosome. This File, 1pnx, Contains
           Only Molecules Of The 30s Ribosomal Subunit. The 50s
           Subunit Is In The Pdb File 1pny.
 gi|56966326|pdb|1VOQ|D Chain D, Crystal Structure Of Five 70s Ribosomes From Escherichia
           Coli In Complex With Protein Y. This File Contains The
           30s Subunit Of One 70s Ribosome. The Entire Crystal
           Structure Contains Five 70s Ribosomes And Is Described
           In Remark 400.
 gi|56966379|pdb|1VOS|D Chain D, Crystal Structure Of Five 70s Ribosomes From Escherichia
           Coli In Complex With Protein Y. This File Contains The
           30s Subunit Of One 70s Ribosome. The Entire Crystal
           Structure Contains Five 70s Ribosomes And Is Described
           In Remark 400.
 gi|56966432|pdb|1VOV|D Chain D, Crystal Structure Of Five 70s Ribosomes From Escherichia
           Coli In Complex With Protein Y. This File Contains The
           30s Subunit Of One 70s Ribosome. The Entire Crystal
           Structure Contains Five 70s Ribosomes And Is Described
           In Remark 400.
 gi|56966485|pdb|1VOX|D Chain D, Crystal Structure Of Five 70s Ribosomes From Escherichia
           Coli In Complex With Protein Y. This File Contains The
           30s Subunit Of One 70s Ribosome. The Entire Crystal
           Structure Contains Five 70s Ribosomes And Is Described
           In Remark 400.
 gi|56966538|pdb|1VOZ|D Chain D, Crystal Structure Of Five 70s Ribosomes From Escherichia
           Coli In Complex With Protein Y. This File Contains The
           30s Subunit Of One 70s Ribosome. The Entire Crystal
           Structure Contains Five 70s Ribosomes And Is Described
           In Remark 400.
 gi|149241278|pdb|2E5L|D Chain D, A Snapshot Of The 30s Ribosomal Subunit Capturing Mrna Via
           The Shine- Dalgarno Interaction
 gi|224510686|pdb|3FIC|D Chain D, T. Thermophilus 70s Ribosome In Complex With Mrna, Trnas
           And Ef-Tu.Gdp.Kirromycin Ternary Complex, Fitted To A
           6.4 A Cryo-Em Map. This File Contains The 30s Subunit
           And The Ligands
 gi|226887632|pdb|2ZM6|D Chain D, Crystal Structure Of The Thermus Thermophilus 30s
           Ribosomal Subunit
 gi|300508608|pdb|3MR8|D Chain D, Recognition Of The Amber Stop Codon By Release Factor Rf1.
           This Entry 3mr8 Contains 30s Ribosomal Subunit. The 50s
           Ribosomal Subunit Can Be Found In Pdb Entry 3ms1.
           Molecule B In The Same Asymmetric Unit Is Deposited As
           3mrz (50s) And 3ms0 (30s).
 gi|300508663|pdb|3MS0|D Chain D, Recognition Of The Amber Stop Codon By Release Factor Rf1.
           This Entry 3ms0 Contains 30s Ribosomal Subunit. The 50s
           Ribosomal Subunit Can Be Found In Pdb Entry 3mrz.
           Molecule A In The Same Asymmetric Unit Is Deposited As
           3mr8 (30s) And 3ms1 (50s).
 gi|322812553|pdb|3PYN|D Chain D, Crystal Structure Of A Complex Containing Domain 3 From
           The Psiv Igr Ires Rna Bound To The 70s Ribosome. This
           File Contains The 30s Subunit Of The First 70s Ribosome.
 gi|322812606|pdb|3PYQ|D Chain D, Crystal Structure Of A Complex Containing Domain 3 From
           The Psiv Igr Ires Rna Bound To The 70s Ribosome. This
           File Contains The 30s Subunit Of The Second 70s
           Ribosome.
 gi|322812659|pdb|3PYS|D Chain D, Crystal Structure Of A Complex Containing Domain 3 Of Crpv
           Igr Ires Rna Bound To The 70s Ribosome. This File
           Contains The 30s Subunit Of The First 70s Ribosome.
 gi|322812712|pdb|3PYU|D Chain D, Crystal Structure Of A Complex Containing Domain 3 Of Crpv
           Igr Ires Rna Bound To The 70s Ribosome. This File
           Contains The 30s Subunit Of The Second 70s Ribosome
          Length = 208

 Score = 42.5 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 12/79 (15%), Positives = 32/79 (40%), Gaps = 3/79 (3%)

Query: 320 ATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKI 379
                  F+ +   + + T S+    +   +    ++ + GFA S  +AR+ ++   I +
Sbjct: 71  ERQFRNLFEEASKKKGV-TGSVFLGLLESRLD--NVVYRLGFAVSRRQARQLVRHGHITV 127

Query: 380 NNSIISNEKLQIKLQDFDS 398
           N   +     +++  D  +
Sbjct: 128 NGRRVDLPSYRVRPGDEIA 146


>gi|327330001|gb|EGE71755.1| ribosomal large subunit pseudouridine synthase B [Propionibacterium
           acnes HL097PA1]
          Length = 245

 Score = 42.5 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 9/48 (18%), Positives = 25/48 (52%), Gaps = 1/48 (2%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
            +G+ L  ++ +AG A S   A   + +  +++N  +I ++  ++  +
Sbjct: 4   EQGIRLQKVLAQAGLA-SRRAAEDMIAAGRVEVNGELIVDQGRRVDPE 50


>gi|324327271|gb|ADY22531.1| tryptophanyl-tRNA synthetase [Bacillus thuringiensis serovar
           finitimus YBT-020]
          Length = 332

 Score = 42.5 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 23/100 (23%), Positives = 34/100 (34%), Gaps = 17/100 (17%)

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLF 222
           L+ +  ++   + Y IL A D + L +     +   G DQ  +I    D+         F
Sbjct: 123 LEVDAGVNMGLYTYPILMAADIL-LFQATHVPV---GKDQIQHIEIARDIATYFN--HTF 176

Query: 223 ALTSPL-----------LTTASGTKMGKTLSGAIWLNKEM 251
             T  L           L    G KM K+    I L  E 
Sbjct: 177 GTTFTLPEYVIQEEGAILPGLDGRKMSKSYGNVIPLFAEK 216


>gi|169763042|ref|XP_001727421.1| tryptophanyl-tRNA synthetase, cytoplasmic [Aspergillus oryzae
           RIB40]
 gi|238488889|ref|XP_002375682.1| tryptophanyl-tRNA synthetase, putative [Aspergillus flavus
           NRRL3357]
 gi|83770449|dbj|BAE60582.1| unnamed protein product [Aspergillus oryzae]
 gi|220698070|gb|EED54410.1| tryptophanyl-tRNA synthetase, putative [Aspergillus flavus
           NRRL3357]
          Length = 419

 Score = 42.5 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 17/61 (27%), Positives = 22/61 (36%), Gaps = 1/61 (1%)

Query: 15  RGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +   +  L  +G     Y G   +  SLH GH   L    WLQ     P+  
Sbjct: 64  RGLFFSHRDFDRILNLYERGEPFFLYTGRGPSTGSLHLGHTIPLQFTKWLQDVFDVPLVF 123

Query: 74  M 74
           M
Sbjct: 124 M 124


>gi|291005221|ref|ZP_06563194.1| tryptophanyl-tRNA synthetase [Saccharopolyspora erythraea NRRL
           2338]
          Length = 346

 Score = 42.5 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 48/305 (15%), Positives = 95/305 (31%), Gaps = 65/305 (21%)

Query: 41  GYDLTASSLHAGHLTQLM----LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRS 96
           G   TA S H G+    +    ++       +  + L     ++  DP      R  + +
Sbjct: 22  GIQPTADSFHLGNYLGALREWVVMQETHDAFYCVVDL--HAITMGHDPELLRR-RTRLSA 78

Query: 97  QEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSF 156
            ++       +        +    T        +W        ++  +  F    RM  F
Sbjct: 79  AQLLALGIDPERATLFVQSHVPEHTQ------LSW--------VMECLTGFGEAGRMTQF 124

Query: 157 ESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL-GER 215
           +   +R +    +S   F Y +LQA D + + +     +   G DQ  ++    +L    
Sbjct: 125 KDKSAR-QEADHVSVGLFTYPVLQAADIL-IYQADAVPV---GEDQRQHLELTRNLAQRF 179

Query: 216 ----------------LKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQ 259
                            +T K+F L  P        KM K++   +   + +  P    +
Sbjct: 180 NSRFGETFTVPAAHIPKETAKIFDLQDPT------VKMSKSVPAGV--VELLEDPKRSVK 231

Query: 260 YWRN-IDDA------------DVVSFAKRLTTLPMSEIDRMAKL-QGKEINEAKKIIATE 305
             R+ + DA             V +     + L    I  +    +GK   + KK +   
Sbjct: 232 KIRSAVTDAGREIQYDPENKPGVSNLLVIYSALTGRSIADLEAAYEGKGYGDLKKELGQT 291

Query: 306 ITTMV 310
           +   V
Sbjct: 292 VLEFV 296


>gi|256851964|ref|ZP_05557351.1| tryptophanyl-tRNA synthetase [Lactobacillus jensenii 27-2-CHN]
 gi|260661466|ref|ZP_05862379.1| tryptophanyl-tRNA synthetase [Lactobacillus jensenii 115-3-CHN]
 gi|282931729|ref|ZP_06337217.1| tryptophan--tRNA ligase [Lactobacillus jensenii 208-1]
 gi|297205165|ref|ZP_06922561.1| tryptophan--tRNA ligase [Lactobacillus jensenii JV-V16]
 gi|256615376|gb|EEU20566.1| tryptophanyl-tRNA synthetase [Lactobacillus jensenii 27-2-CHN]
 gi|260547921|gb|EEX23898.1| tryptophanyl-tRNA synthetase [Lactobacillus jensenii 115-3-CHN]
 gi|281304172|gb|EFA96286.1| tryptophan--tRNA ligase [Lactobacillus jensenii 208-1]
 gi|297149743|gb|EFH30040.1| tryptophan--tRNA ligase [Lactobacillus jensenii JV-V16]
          Length = 340

 Score = 42.5 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 37/222 (16%), Positives = 64/222 (28%), Gaps = 31/222 (13%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     LQ  G + P  ++    ++  +    ++ R  +    +  
Sbjct: 12  PTGR-LHIGHYIGSLKNRVILQNEGKYNPYIMIADTQAMTDNARNPEKIRNSLIEVALDY 70

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
               I         +   +  AL      +L  +    L R        N  +  E  + 
Sbjct: 71  LAVGIDP--EKSTIFVQSQIPALFELTAYYLDLVTVARLER--------NPTVKTEIKQK 120

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--- 218
                    FL   Y + QA D       +   +   G DQ   +    ++         
Sbjct: 121 NFNESIPAGFL--TYPVSQAADITA----FKATVIPVGDDQEPMMEQTREIVRTFNRLYN 174

Query: 219 ----PKLFALTSPL----LTTASGT-KMGKTLSGAIWLNKEM 251
                +      P     L    G  KM K+L  AI+L  + 
Sbjct: 175 TDILKEPKGYFPPKGQGRLPGLDGNAKMSKSLGNAIYLADDA 216


>gi|119025929|ref|YP_909774.1| hemolysin-like protein [Bifidobacterium adolescentis ATCC 15703]
 gi|118765513|dbj|BAF39692.1| hemolysin-like protein with S4 domain [Bifidobacterium adolescentis
           ATCC 15703]
          Length = 251

 Score = 42.5 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 29/55 (52%), Gaps = 2/55 (3%)

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDST--GNIKLSFG 407
            +V+ G   S ++A+R ++S  +++N ++ S   L++   D      G+  +S G
Sbjct: 14  ALVERGVTDSRSKAQRLIESGKVRVNGTVASKASLKVTAADTLDADLGDDYVSRG 68


>gi|167040341|ref|YP_001663326.1| tryptophanyl-tRNA synthetase [Thermoanaerobacter sp. X514]
 gi|256750726|ref|ZP_05491611.1| tryptophanyl-tRNA synthetase [Thermoanaerobacter ethanolicus CCSD1]
 gi|300914425|ref|ZP_07131741.1| tryptophanyl-tRNA synthetase [Thermoanaerobacter sp. X561]
 gi|307724339|ref|YP_003904090.1| tryptophanyl-tRNA synthetase [Thermoanaerobacter sp. X513]
 gi|166854581|gb|ABY92990.1| tryptophanyl-tRNA synthetase [Thermoanaerobacter sp. X514]
 gi|256750309|gb|EEU63328.1| tryptophanyl-tRNA synthetase [Thermoanaerobacter ethanolicus CCSD1]
 gi|300889360|gb|EFK84506.1| tryptophanyl-tRNA synthetase [Thermoanaerobacter sp. X561]
 gi|307581400|gb|ADN54799.1| tryptophanyl-tRNA synthetase [Thermoanaerobacter sp. X513]
          Length = 327

 Score = 42.5 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 45/295 (15%), Positives = 98/295 (33%), Gaps = 50/295 (16%)

Query: 37  TAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSII--GDPSFRDESRRMM 94
             + G   +   +H G+    M  F   +  ++         ++    DP       +++
Sbjct: 3   KVFSGVQPSGD-IHIGNYLGAMRQFVALQDDYECFFCAVDLHALTVPQDP-------KVL 54

Query: 95  RSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRML 154
           + + I+             I     K    + ++      + ++  L+ I  F  ++RM 
Sbjct: 55  KEKTIELAA------LYLAIGLDPKKVTIFIQSHVPAHAELAWL--LQCITYFGELSRMT 106

Query: 155 SFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
                + + K ++S+S   F Y  L A D + L   +   +   G DQ  ++    D+ +
Sbjct: 107 Q---FKDKSKGKESVSVGLFTYPDLMAADIL-LYNTHYVPV---GEDQKQHLELTRDIAQ 159

Query: 215 RLKT--PKLFALTSPLLTTASG---------TKMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
           R      + F +  P++               KM K+ S        +  P +  +    
Sbjct: 160 RFNNRFGETFVVPEPMILKLGARIMSLTDPTKKMSKSDSDPNNRINLLDEPSSIKKKIMK 219

Query: 264 -IDDAD------------VVSFAKRLTTLPMSEIDR-MAKLQGKEINEAKKIIAT 304
            + D++            V +     +     EI+  + K  G+     KK +A 
Sbjct: 220 AVTDSESEIRLDWDNKPGVSNLLTIYSLFTGMEIEEVINKFNGQGYGTLKKELAE 274


>gi|261880058|ref|ZP_06006485.1| ribosomal large subunit pseudouridine synthase B [Prevotella
           bergensis DSM 17361]
 gi|270333299|gb|EFA44085.1| ribosomal large subunit pseudouridine synthase B [Prevotella
           bergensis DSM 17361]
          Length = 253

 Score = 42.5 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 10/71 (14%), Positives = 31/71 (43%), Gaps = 1/71 (1%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           + +  + L   +  AG   S  EA   +++  + +N  +++    ++   D     +  +
Sbjct: 13  DPNEPLRLNKFLANAGIC-SRREADEFIQAGVVTVNGEVVTELGTKVLRSDEVKFRDQPV 71

Query: 405 SFGKKNHIICH 415
           +  KK +++ +
Sbjct: 72  TLEKKVYVLLN 82


>gi|182679330|ref|YP_001833476.1| RNA-binding S4 domain-containing protein [Beijerinckia indica
           subsp. indica ATCC 9039]
 gi|182635213|gb|ACB95987.1| RNA-binding S4 domain protein [Beijerinckia indica subsp. indica
           ATCC 9039]
          Length = 528

 Score = 42.5 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 8/67 (11%), Positives = 26/67 (38%), Gaps = 2/67 (2%)

Query: 342 SKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD-FDSTG 400
            + +      +  ++ +AG   S  +A   +    + +N ++++   + +  +D     G
Sbjct: 82  EQKDAQEPQRIAKVMARAGLC-SRRDAEAWIAEGRVSVNGTVLTQPGVSVSDEDVILVDG 140

Query: 401 NIKLSFG 407
               + G
Sbjct: 141 EKLAARG 147


>gi|315926700|gb|EFV06079.1| tryptophanyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           DFVF1099]
          Length = 307

 Score = 42.5 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 31/207 (14%), Positives = 59/207 (28%), Gaps = 31/207 (14%)

Query: 49  LHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKG 108
           +H G+    +      +   +    +    ++          +  +           I  
Sbjct: 1   MHIGNYFGAIKQMVDAQEKSQMFMFIANYHAMTSSQDGEKLKQNSL-KAAAAFLSLGIDP 59

Query: 109 IFSSFIKYGTGKTDALMLNNETW-LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ 167
             S F      K    +     W L     + LL    S+         + V   L    
Sbjct: 60  QKSVFWLQSDVKEVMELY----WILSQFTPMGLLERAHSY--------KDKVAKGLSASH 107

Query: 168 SLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSP 227
            L    F+Y +L A D +     +D ++   G DQ  ++    D+  ++        T P
Sbjct: 108 GL----FSYPVLMAADILL----FDTQIVPVGKDQIQHVEIARDIALKVNNEWGKIFTLP 159

Query: 228 ---------LLTTASGTKMGKTLSGAI 245
                    ++    G KM K+    I
Sbjct: 160 EAKVNEEVAVVVGTDGAKMSKSYQNTI 186


>gi|255037667|ref|YP_003088288.1| pseudouridine synthase [Dyadobacter fermentans DSM 18053]
 gi|254950423|gb|ACT95123.1| pseudouridine synthase [Dyadobacter fermentans DSM 18053]
          Length = 555

 Score = 42.5 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 29/73 (39%), Gaps = 8/73 (10%)

Query: 337 PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
           P+      E +  + L   I  AG   S  EA   + S  I +N  I++    +++  D 
Sbjct: 310 PSARHKDKEETDEIRLNRYIANAGIC-SRREADDLISSGQISVNGKIVTEMGYKVRPTD- 367

Query: 397 DSTGNIKLSFGKK 409
                  + +GKK
Sbjct: 368 ------VVKYGKK 374


>gi|161506808|ref|YP_001576762.1| tryptophanyl-tRNA synthetase II [Lactobacillus helveticus DPC 4571]
 gi|160347797|gb|ABX26471.1| Tryptophanyl-tRNA synthetase [Lactobacillus helveticus DPC 4571]
          Length = 340

 Score = 42.5 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 36/225 (16%), Positives = 68/225 (30%), Gaps = 37/225 (16%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T + LH GH    +     LQ +G + P  ++    ++  +    ++ R  +    +  
Sbjct: 12  PTGN-LHIGHYIGSLKNRVKLQNSGKYDPYIMIADTQALTDNARNPEKIRNSLIQVALDY 70

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
               I             K+   + +    L  +    +     +    N  +  E  + 
Sbjct: 71  LAVGI----------DPSKSTIYVQSQIPALFELTSYYMDLVTVARLERNPTVKTEIKQK 120

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKL 221
             K    + FL  NY + QA D       +   +   G DQ   +    ++         
Sbjct: 121 DFKDSIPVGFL--NYPVSQAADITA----FKATIVPVGDDQEPMLEQTREIVRTFNR--- 171

Query: 222 FALTSPL--------------LTTASGT-KMGKTLSGAIWLNKEM 251
              T  L              L    G  KM K+L   I+L+ + 
Sbjct: 172 VYNTDILVEPKGYFPPKGSGRLPGLDGNAKMSKSLGNCIYLSDDA 216


>gi|149044165|gb|EDL97547.1| rCG27710, isoform CRA_b [Rattus norvegicus]
          Length = 271

 Score = 42.5 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 14/60 (23%), Positives = 25/60 (41%), Gaps = 1/60 (1%)

Query: 15  RGFIHQISN-PRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +  + LD   ++     Y G   ++ ++H GHL   +   WLQ     P+ +
Sbjct: 138 RGIFFSHRDMNQILDAYENKKPFYLYTGRGPSSEAMHLGHLVPFIFTKWLQDVFDVPLVI 197


>gi|119497937|ref|XP_001265726.1| tryptophanyl-tRNA synthetase [Neosartorya fischeri NRRL 181]
 gi|119413890|gb|EAW23829.1| tryptophanyl-tRNA synthetase [Neosartorya fischeri NRRL 181]
          Length = 433

 Score = 42.5 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 15/61 (24%), Positives = 22/61 (36%), Gaps = 1/61 (1%)

Query: 15  RGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG +    +    LD          Y G   ++ S+H GH        WLQ     P+ +
Sbjct: 84  RGIVFSHRDLNLILDHYEKGQPFYLYTGRGPSSDSMHVGHTIPFEFTKWLQDVFDCPLVI 143

Query: 74  M 74
           M
Sbjct: 144 M 144


>gi|70606285|ref|YP_255155.1| tryptophanyl-tRNA synthetase [Sulfolobus acidocaldarius DSM 639]
 gi|76363446|sp|Q4JBG7|SYW_SULAC RecName: Full=Tryptophanyl-tRNA synthetase; AltName:
           Full=Tryptophan--tRNA ligase; Short=TrpRS
 gi|68566933|gb|AAY79862.1| tryptophanyl-tRNA synthetase [Sulfolobus acidocaldarius DSM 639]
          Length = 381

 Score = 42.5 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 54/304 (17%), Positives = 93/304 (30%), Gaps = 53/304 (17%)

Query: 46  ASSL--HAGHLTQLMLLFWLQ-KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN 102
           A SL  H GHL   +   WLQ K        +        D  F            + + 
Sbjct: 81  APSLGMHIGHLIPFIFTKWLQEKFKVNVYIEITD------DEKFLRNV-----DYTLDQT 129

Query: 103 IEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR 162
            E         I  G       +  +  ++ ++  + +         + + L+F  VR+ 
Sbjct: 130 KEWSYENILDIIAVGFDPNKTFIFQDTEYIKNMYPLSV--------KIAKKLTFNEVRAT 181

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK---TP 219
              + S +     Y  LQ      + +   C +  G  DQ        D+ E L      
Sbjct: 182 FGLDTSSNIGIIFYPALQ--IVPTMFEKRRCLIPAG-IDQDPYWRLQRDIAESLGYFKAA 238

Query: 220 KLFALTSPLLTTASGTKMGKTLSG-AIWLNKE------MTSPYNF---------WQYWRN 263
           ++ +   P LT   G KM  +    AI+L  +          Y F          + +  
Sbjct: 239 QIHSKFLPPLTGPEG-KMSSSQPETAIYLTDDPKTVERKIMKYAFSGGQATVELHRKYGG 297

Query: 264 IDDADVV-SFAKRLTTLPMSE----IDRMAKLQGKEINEAKKIIATEITTMVHGREEAEK 318
             D DV   +       P  +    I+   +       E K+I+  ++   +   E  EK
Sbjct: 298 NPDIDVAFQWLYMF-FEPDDQRIRKIEEDYRSGAMLTGELKQILVDKLNAFL--EEHREK 354

Query: 319 AATA 322
              A
Sbjct: 355 REKA 358


>gi|71992775|ref|NP_740947.2| hypothetical protein Y105E8A.19 [Caenorhabditis elegans]
 gi|29603456|emb|CAD21668.2| C. elegans protein Y105E8A.19, confirmed by transcript evidence
           [Caenorhabditis elegans]
 gi|30962539|dbj|BAC76736.1| tyrosyl-tRNA synthetase (cytoplasmic) [Caenorhabditis elegans]
          Length = 722

 Score = 42.5 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 50/297 (16%), Positives = 96/297 (32%), Gaps = 37/297 (12%)

Query: 1   MPAFKSDFLSILSE-----RGFI----HQISNPRELDILCS--QGVVTAYIGYDLTASSL 49
           M A  ++ +  ++E     R  I     +     +L         V   Y G   T    
Sbjct: 1   MSAENAEKVEEITEKTKETRELILRNLQESLGVDKLTKQLETPGKVPHVYWGTATTGKP- 59

Query: 50  HAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGD--PSFRDESRRMMRSQEIQENIEKIK 107
           H G+L  +  +    + G K   L     + + +   S+     R++  + + + + +  
Sbjct: 60  HVGYLVPMRKIADFLQAGLKVTILFADLHAYLDNMKSSWELLKCRVIYYENVIKALLQSL 119

Query: 108 GIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ 167
            +    + +  G            L      D+LR        + + +   V  +++   
Sbjct: 120 DVPIEQLYFKKGTEYQ--------LSREYTDDVLRLSAQVSQRDALKAGAEVVKQVESPL 171

Query: 168 SLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSP 227
               L     +LQA D   L        Q GG DQ    I   +   +LK  K + L +P
Sbjct: 172 LSGLLY---PLLQALDEQYLK----VDGQFGGVDQRKIFILAEEQLPKLKLGKRWHLMNP 224

Query: 228 LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWR------NIDDADVVSFAKRLTT 278
           ++   +GTKM  +   +      +  P              +  D  V+SF   +  
Sbjct: 225 MVPGLTGTKMSSSEEDS--KIDVLDEPEKVRSKIMGAACSRDQPDNGVLSFYNFVLF 279


>gi|330957992|gb|EGH58252.1| tryptophanyl-tRNA synthetase [Pseudomonas syringae pv. maculicola
           str. ES4326]
          Length = 449

 Score = 42.5 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 31/193 (16%), Positives = 59/193 (30%), Gaps = 32/193 (16%)

Query: 166 EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-----TPK 220
           +  ++   ++Y +L A D + +   +   +   G DQ  ++    D+G+R         +
Sbjct: 126 DAGITMGLYSYPVLMAADIL-MFNAHQVPV---GRDQIQHVEMARDIGQRFNHLFGKGKE 181

Query: 221 LFAL-------TSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNID-------D 266
            F +       +   L    G KM K+    I L        +                D
Sbjct: 182 FFVMPEALIEESVATLPGLDGRKMSKSYDNTIPLFSSAKEMKSAISRIVTDSRAPGEAKD 241

Query: 267 ADVVSFAKRLTTLPMSE---IDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAA 323
            D              E     R   LQG    EAK  +     T++ G+    +A    
Sbjct: 242 PDTSHLFTLYQAFSTPEQCAEFRSELLQGLGWGEAKTRL----FTLLDGQ--LSEARENY 295

Query: 324 MECFDMSIHSQHM 336
           +   +     + +
Sbjct: 296 LSLIERPADLEDI 308


>gi|327441294|dbj|BAK17659.1| tryptophanyl-tRNA synthetase [Solibacillus silvestris StLB046]
          Length = 329

 Score = 42.5 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 46/249 (18%), Positives = 84/249 (33%), Gaps = 34/249 (13%)

Query: 37  TAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRS 96
           T + G   T + +  G+    +  F   +  +  I  +    + I  P  R E R+ +RS
Sbjct: 3   TIFSGVQPTGT-ITLGNYIGAIKQFPALQENNNAIYCIVDQHA-ITVPQDRLELRKNIRS 60

Query: 97  QEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSF 156
                    I    S           A       W        +L+ + S   + RM   
Sbjct: 61  LAAMYIACGIDPKKSILFIQSEVPAHAQ----AGW--------MLQCVASIGELERMTQ- 107

Query: 157 ESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL 216
              + +   ++S+S     Y  L A D +     Y+  +   G DQ  +I    DL ER 
Sbjct: 108 --FKDKSTGKESVSAALLTYPPLMAADILL----YNTDIVPVGEDQKQHIELTRDLAERF 161

Query: 217 KTPKLFALTSP-LLTTASG----------TKMGKTLSGAIWLNKEMTSPYNFWQYWRN-I 264
                  LT P +     G           KM K+ + +    + + +     +  ++ +
Sbjct: 162 NKRYNDVLTIPDIQLPKEGARIKSLQEPTKKMSKSDTNSKATIRLLDTAKEIEKKIKSAV 221

Query: 265 DDAD-VVSF 272
            D++ +V F
Sbjct: 222 TDSEGIVKF 230


>gi|7440168|pir||JE0399 ribosomal protein S4 - Thermus aquaticus (strain HB8)
          Length = 209

 Score = 42.5 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 12/79 (15%), Positives = 32/79 (40%), Gaps = 3/79 (3%)

Query: 320 ATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKI 379
                  F+ +   + + T S+    +   +    ++ + GFA S  +AR+ ++   I +
Sbjct: 72  ERQFRNLFEEASKKKGV-TGSVFLGLLESRLD--NVVYRLGFAVSRRQARQLVRHGHITV 128

Query: 380 NNSIISNEKLQIKLQDFDS 398
           N   +     +++  D  +
Sbjct: 129 NGRRVDLPSYRVRPGDEIA 147


>gi|10835588|pdb|1FJG|D Chain D, Structure Of The Thermus Thermophilus 30s Ribosomal
           Subunit In Complex With The Antibiotics Streptomycin,
           Spectinomycin, And Paromomycin
 gi|13096397|pdb|1HR0|D Chain D, Crystal Structure Of Initiation Factor If1 Bound To The
           30s Ribosomal Subunit
 gi|14278013|pdb|1GIX|G Chain G, Crystal Structure Of The Ribosome At 5.5 A Resolution.
           This File, 1gix, Contains The 30s Ribosome Subunit,
           Three Trna, And Mrna Molecules. 50s Ribosome Subunit Is
           In The File 1giy
 gi|15826123|pdb|1JGO|G Chain G, The Path Of Messenger Rna Through The Ribosome. This File,
           1jgo, Contains The 30s Ribosome Subunit, Three Trna, And
           Mrna Molecules. 50s Ribosome Subunit Is In The File 1giy
 gi|15826148|pdb|1JGP|G Chain G, The Path Of Messenger Rna Through The Ribosome. This File,
           1jgp, Contains The 30s Ribosome Subunit, Three Trna, And
           Mrna Molecules. 50s Ribosome Subunit Is In The File 1giy
 gi|15826173|pdb|1JGQ|G Chain G, The Path Of Messenger Rna Through The Ribosome. This File,
           1jgq, Contains The 30s Ribosome Subunit, Three Trna, And
           Mrna Molecules. 50s Ribosome Subunit Is In The File 1giy
 gi|28373702|pdb|1ML5|G Chain G, Structure Of The E. Coli Ribosomal Termination Complex
           With Release Factor 2
 gi|110591326|pdb|2F4V|D Chain D, 30s Ribosome + Designer Antibiotic
          Length = 209

 Score = 42.5 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 12/79 (15%), Positives = 32/79 (40%), Gaps = 3/79 (3%)

Query: 320 ATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKI 379
                  F+ +   + + T S+    +   +    ++ + GFA S  +AR+ ++   I +
Sbjct: 72  ERQFRNLFEEASKKKGV-TGSVFLGLLESRLD--NVVYRLGFAVSRRQARQLVRHGHITV 128

Query: 380 NNSIISNEKLQIKLQDFDS 398
           N   +     +++  D  +
Sbjct: 129 NGRRVDLPSYRVRPGDEIA 147


>gi|46199603|ref|YP_005270.1| 30S ribosomal protein S4 [Thermus thermophilus HB27]
 gi|55981634|ref|YP_144931.1| 30S ribosomal protein S4 [Thermus thermophilus HB8]
 gi|7404455|sp|P80373|RS4_THET8 RecName: Full=30S ribosomal protein S4
 gi|50401228|sp|P62664|RS4_THET2 RecName: Full=30S ribosomal protein S4
 gi|10120567|pdb|1FKA|D Chain D, Structure Of Functionally Activated Small Ribosomal
           Subunit At 3.3 A Resolution
 gi|13399795|pdb|1HNW|D Chain D, Structure Of The Thermus Thermophilus 30s Ribosomal
           Subunit In Complex With Tetracycline
 gi|13399817|pdb|1HNX|D Chain D, Structure Of The Thermus Thermophilus 30s Ribosomal
           Subunit In Complex With Pactamycin
 gi|13399839|pdb|1HNZ|D Chain D, Structure Of The Thermus Thermophilus 30s Ribosomal
           Subunit In Complex With Hygromycin B
 gi|14278059|pdb|1IBK|D Chain D, Structure Of The Thermus Thermophilus 30s Ribosomal
           Subunit In Complex With The Antibiotic Paromomycin
 gi|14278080|pdb|1IBL|D Chain D, Structure Of The Thermus Thermophilus 30s Ribosomal
           Subunit In Complex With A Messenger Rna Fragment And
           Cognate Transfer Rna Anticodon Stem-Loop Bound At The A
           Site And With The Antibiotic Paromomycin
 gi|14278104|pdb|1IBM|D Chain D, Structure Of The Thermus Thermophilus 30s Ribosomal
           Subunit In Complex With A Messenger Rna Fragment And
           Cognate Transfer Rna Anticodon Stem-Loop Bound At The A
           Site
 gi|58177403|pdb|1XMO|D Chain D, Crystal Structure Of Mnm5u34t6a37-Trnalysuuu Complexed
           With Aag-Mrna In The Decoding Center
 gi|58177426|pdb|1XMQ|D Chain D, Crystal Structure Of T6a37-Asllysuuu Aaa-Mrna Bound To The
           Decoding Center
 gi|58177467|pdb|1XNQ|D Chain D, Structure Of An Inosine-Adenine Wobble Base Pair Complex
           In The Context Of The Decoding Center
 gi|58177490|pdb|1XNR|D Chain D, Crystal Structure Of An Inosine-Cytosine Wobble Base Pair
           In The Context Of The Decoding Center
 gi|66361057|pdb|1YL4|G Chain G, Crystal Structure Of 70s Ribosome With Thrs Operator And
           Trnas. 30s Subunit. The Coordinates For The 50s Subunit
           Are In The Pdb Entry 1yl3
 gi|88192239|pdb|2B64|D Chain D, 30s Ribosomal Subunit, Trnas, Mrna And Release Factor Rf1
           From A Crystal Structure Of The Whole Ribosomal Complex.
           This File Contains The 30s Subunit, Trnas, Mrna And
           Release Factor Rf1 From A Crystal Structure Of The Whole
           Ribosomal Complex". The Entire Crystal Structure
           Contains One 70s Ribosome, Trnas, Mrna And Release
           Factor Rf1 And Is Described In Remark 400.
 gi|88192302|pdb|2B9M|D Chain D, 30s Ribosomal Subunit, Trnas, Mrna And Release Factor Rf2
           From A Crystal Structure Of The Whole Ribosomal Complex.
           This File Contains The 30s Ribosomal Subunit, Trnas,
           Mrna And Release Factor Rf2 From A Crystal Structure Of
           The Whole Ribosomal Complex". The Entire Crystal
           Structure Contains One 70s Ribosome, Trnas, Mrna And
           Release Factor Rf2 And Is Described In Remark 400.
 gi|88192358|pdb|2B9O|D Chain D, 30s Ribosomal Subunit, Trnas And Mrna From A Crystal
           Structure Of The Whole Ribosomal Complex With A Stop
           Codon In The A-Site. This File Contains The 30s Subunit,
           Trnas And Mrna From A Crystal Structure Of The Whole
           Ribosomal Complex With A Stop Codon In The A-Site And Is
           Described In Remark 400.
 gi|116667657|pdb|2HHH|D Chain D, Crystal Structure Of Kasugamycin Bound To The 30s
           Ribosomal Subunit
 gi|116668200|pdb|2J00|D Chain D, Structure Of The Thermus Thermophilus 70s Ribosome
           Complexed With Mrna, Trna And Paromomycin (Part 1 Of 4).
           This File Contains The 30s Subunit, Mrna, A-, P- And
           E-Site Trnas And Paromomycin For Molecule I.
 gi|116668261|pdb|2J02|D Chain D, Structure Of The Thermus Thermophilus 70s Ribosome
           Complexed With Mrna, Trna And Paromomycin (Part 3 Of 4)
           This File Contains The 30s Subunit, Mrna, A-, P- And
           E-Site Trnas And Paromomycin For Molecule Ii.
 gi|119389715|pdb|2HGI|G Chain G, Crystal Structure Of The 70s Thermus Thermophilus Ribosome
           Showing How The 16s 3'-End Mimicks Mrna E And P Codons.
           This Entry 2hgi Contains 30s Ribosomal Subunit. The 50s
           Ribosomal Subunit Can Be Found In Pdb Entry 2hgj.
 gi|119389772|pdb|2HGP|G Chain G, Crystal Structure Of The 70s Thermus Thermophilus Ribosome
           With Translocated And Rotated Shine-Dalgarno Duplex.
           This Entry 2hgp Contains 30s Ribosomal Subunit. The 50s
           Ribosomal Subunit Can Be Found In Pdb Entry 2hgq.
 gi|119389828|pdb|2HGR|G Chain G, 70s T.Th. Ribosome Functional Complex With Mrna And E- And
           P-Site Trnas At 4.5a. This Entry 2hgr Contains 30s
           Ribosomal Subunit. The 50s Ribosomal Subunit Can Be
           Found In Pdb Entry 2hgu.
 gi|149242711|pdb|2OW8|EE Chain e, Crystal Structure Of A 70s Ribosome-Trna Complex Reveals
           Functional Interactions And Rearrangements. This File,
           2ow8, Contains The 30s Ribosome Subunit, Two Trna, And
           Mrna Molecules. 50s Ribosome Subunit Is In The File
           1vsa.
 gi|149243621|pdb|2UU9|D Chain D, Structure Of The Thermus Thermophilus 30s Ribosomal
           Subunit Complexed With A Valine-Asl With Cmo5u In
           Position 34 Bound To An Mrna With A Gug-Codon In The
           A-Site And Paromomycin.
 gi|149243648|pdb|2UUA|D Chain D, Structure Of The Thermus Thermophilus 30s Ribosomal
           Subunit Complexed With A Valine-Asl With Cmo5u In
           Position 34 Bound To An Mrna With A Guc-Codon In The
           A-Site And Paromomycin.
 gi|149243675|pdb|2UUB|D Chain D, Structure Of The Thermus Thermophilus 30s Ribosomal
           Subunit Complexed With A Valine-Asl With Cmo5u In
           Position 34 Bound To An Mrna With A Guu-Codon In The
           A-Site And Paromomycin.
 gi|149243702|pdb|2UUC|D Chain D, Structure Of The Thermus Thermophilus 30s Ribosomal
           Subunit Complexed With A Valine-Asl With Cmo5u In
           Position 34 Bound To An Mrna With A Gua-Codon In The
           A-Site And Paromomycin.
 gi|149243841|pdb|2UXC|D Chain D, Crystal Structure Of An Extended Trna Anticodon Stem Loop
           In Complex With Its Cognate Mrna Ucgu In The Context Of
           The Thermus Thermophilus 30s Subunit.
 gi|157836411|pdb|2UXB|D Chain D, Crystal Structure Of An Extended Trna Anticodon Stem Loop
           In Complex With Its Cognate Mrna Gggu In The Context Of
           The Thermus Thermophilus 30s Subunit.
 gi|157836488|pdb|2V46|D Chain D, Structure Of The Ribosome Recycling Factor Bound To The
           Thermus Thermophilus 70s Ribosome With Mrna, Asl-Phe And
           Trna-Fmet (Part 1 Of 4). This File Contains The 30s
           Subunit, Mrna, P-Site Asl, E-Site Trna And Rrf For
           Molecule 1.
 gi|157836544|pdb|2V48|D Chain D, Structure Of The Ribosome Recycling Factor Bound To The
           Thermus Thermophilus 70s Ribosome With Mrna, Asl-Phe And
           Trna-Fmet (Part 3 Of 4). This File Contains The 30s
           Subunit, Mrna, P-Site Asl, E-Site Trna And Rrf For
           Molecule 2.
 gi|158430903|pdb|2UXD|D Chain D, Crystal Structure Of An Extended Trna Anticodon Stem Loop
           In Complex With Its Cognate Mrna Cggg In The Context Of
           The Thermus Thermophilus 30s Subunit.
 gi|160285942|pdb|2QNH|EE Chain e, Interactions And Dynamics Of The Shine-Dalgarno Helix In
           The 70s Ribosome. This File, 2qnh, Contains The 30s
           Ribosome Subunit, Two Trna, And Mrna Molecules. 50s
           Ribosome Subunit Is In The File 1vsp.
 gi|186972852|pdb|2VQE|D Chain D, Modified Uridines With C5-Methylene Substituents At The
           First Position Of The Trna Anticodon Stabilize U-G
           Wobble Pairing During Decoding
 gi|186972875|pdb|2VQF|D Chain D, Modified Uridines With C5-Methylene Substituents At The
           First Position Of The Trna Anticodon Stabilize U-G
           Wobble Pairing During Decoding
 gi|187609258|pdb|2ZKQ|DD Chain d, Structure Of A Mammalian Ribosomal 40s Subunit Within An
           80s Complex Obtained By Docking Homology Models Of The
           Rna And Proteins Into An 8.7 A Cryo-Em Map
 gi|209156499|pdb|3D5A|D Chain D, Structural Basis For Translation Termination On The 70s
           Ribosome. This File Contains The 30s Subunit, Release
           Factor 1 (Rf1), Two Trna, And Mrna Molecules Of One 70s
           Ribosome. The Entire Crystal Structure Contains Two 70s
           Ribosomes As Described In Remark 400.
 gi|209156555|pdb|3D5C|D Chain D, Structural Basis For Translation Termination On The 70s
           Ribosome. This File Contains The 30s Subunit, Release
           Factor 1 (Rf1), Two Trna, And Mrna Molecules Of The
           Second 70s Ribosome. The Entire Crystal Structure
           Contains Two 70s Ribosomes As Described In Remark 400.
 gi|211938822|pdb|2JL5|D Chain D, Insights Into Translational Termination From The Structure
           Of Rf2 Bound To The Ribosome (Part 1 Of 4). This File
           Contains The 30s Subunit.
 gi|211938880|pdb|2JL7|D Chain D, Insights Into Translational Termination From The Structure
           Of Rf2 Bound To The Ribosome (Part 3 Of 4). This File
           Contains The 30s Subunit.
 gi|218766776|pdb|3F1E|D Chain D, Crystal Structure Of A Translation Termination Complex
           Formed With Release Factor Rf2. This File Contains The
           30s Subunit, Rf2, Two Trna, And Mrna Molecules Of One
           70s Ribosome. The Entire Crystal Structure Contains Two
           70s Ribosomes As Described In Remark 400.
 gi|218766832|pdb|3F1G|D Chain D, Crystal Structure Of A Translation Termination Complex
           Formed With Release Factor Rf2. This File Contains The
           30s Subunit, Rf2, Two Trna, And Mrna Molecules Of The
           Second 70s Ribosome. The Entire Crystal Structure
           Contains Two 70s Ribosomes As Described In Remark 400.
 gi|226887377|pdb|2WDG|D Chain D, Structure Of The Thermus Thermophilus 70s Ribosome In
           Complex With Mrna, Paromomycin, Acylated A-Site Trna,
           Deacylated P-Site Trna, And E-Site Trna.  This File
           Contains The 30s Subunit A-,P-, And E-Site Trnas And
           Paromomycin For Molecule I.
 gi|226887402|pdb|2WDH|D Chain D, Structure Of The Thermus Thermophilus 70s Ribosome In
           Complex With Mrna, Paromomycin, Acylated A-Site Trna,
           Deacylated P-Site Trna, And E-Site Trna.  This File
           Contains The 30s Subunit A-,P-, And E-Site Trnas And
           Paromomycin For Molecule Ii.
 gi|226887491|pdb|2WDK|D Chain D, Structure Of The Thermus Thermophilus 70s Ribosome In
           Complex With Mrna, Paromomycin, Acylated A- And P-Site
           Trnas, And E-Site Trna.  This File Contains The 30s
           Subunit A-,P-, And E-Site Trnas And Paromomycin For
           Molecule I.
 gi|226887548|pdb|2WDM|D Chain D, Structure Of The Thermus Thermophilus 70s Ribosome In
           Complex With Mrna, Paromomycin, Acylated A- And P-Site
           Trnas, And E-Site Trna.  This File Contains The 30s
           Subunit A-,P-, And E-Site Trnas And Paromomycin For
           Molecule Ii.
 gi|237823532|pdb|2WH1|D Chain D, Insights Into Translational Termination From The Structure
           Of Rf2 Bound To The Ribosome
 gi|237823591|pdb|2WH3|D Chain D, Insights Into Translational Termination From The Structure
           Of Rf2 Bound To The Ribosome). This File Contains The
           30s Subunit.
 gi|260099989|pdb|3HUW|D Chain D, Structure Of Ef-P Bound To The 70s Ribosome; This File
           Contains The 30s Subunit, Mrna, P-Site Trna And Ef-P For
           Molecule I.
 gi|260100045|pdb|3HUY|D Chain D, Structure Of Ef-P Bound To The 70s Ribosome; This File
           Contains The 30s Subunit, Mrna, P-Site Trna And Ef-P For
           Molecule Ii.
 gi|261824487|pdb|2WRI|D Chain D, The Structure Of The Ribosome With Elongation Factor G
           Trapped In The Post-Translocational State (Part 1 Of 4).
 gi|261824549|pdb|2WRK|D Chain D, The Structure Of The Ribosome With Elongation Factor G
           Trapped In The Post-Translocational State (Part 3 Of 4).
 gi|261824611|pdb|2WRN|D Chain D, The Crystal Structure Of The 70s Ribosome Bound To Ef-Tu
           And Trna (Part 1 Of 4).
 gi|261824670|pdb|2WRQ|D Chain D, The Crystal Structure Of The 70s Ribosome Bound To Ef-Tu
           And Trna (Part 3 Of 4).
 gi|281307170|pdb|3KIQ|DD Chain d, Structure Of Rele Nuclease Bound To The 70s Ribosome
           (Precleavage State; Part 1 Of 4)
 gi|281307228|pdb|3KIS|DD Chain d, Structure Of Rele Nuclease Bound To The 70s Ribosome
           (Precleavage State; Part 3 Of 4)
 gi|281307286|pdb|3KIU|DD Chain d, Structure Of Rele Nuclease Bound To The 70s Ribosome
           (Postcleavage State; Part 1 Of 4)
 gi|281307344|pdb|3KIX|DD Chain d, Structure Of Rele Nuclease Bound To The 70s Ribosome
           (Postcleavage State; Part 3 Of 4)
 gi|288965607|pdb|3KNH|D Chain D, The Structures Of Viomycin Bound To The 70s Ribosome. This
           File Contains The 30s Subunit For Molecule I
 gi|289526685|pdb|3KNJ|D Chain D, The Structures Of Viomycin Bound To The 70s Ribosome. This
           File Contains The 30s Subunit For Molecule Ii'
 gi|289526710|pdb|3KNL|D Chain D, The Structures Of Capreomycin Bound To The 70s Ribosome.
           This File Contains The 30s Subunit For Molecule I
 gi|289526735|pdb|3KNN|D Chain D, The Structures Of Capreomycin Bound To The 70s Ribosome.
           This File Contains The 30s Subunit For Molecule Ii
 gi|294979507|pdb|3I8G|G Chain G, Elongation Complex Of The 70s Ribosome With Three Trnas
           And Entry 3i8g Contains 30s Ribosomal Subnit.The 50s
           Ribosomal Can Be Found In Pdb Entry 3i8f. Molecule B In
           The Same Asym Unit Is Deposited As 3i8g (30s) And 3i8f
           (50s).
 gi|294979532|pdb|3I8H|G Chain G, Elongation Complex Of The 70s Ribosome With Three Trnas
           And Entry 3i8h Contains 30s Ribosomal Subnit. The 50s
           Ribosomal Can Be Found In Pdb Entry 3i8i. Molecule A In
           The Same Asym Unit Is Deposited As 3i8f (50s) And 3i8g
           (30s).
 gi|294979591|pdb|3I9B|G Chain G, Initiation Complex Of 70s Ribosome With Two Trnas And
           Mrna. 3i9b Contains 30s Ribosomal Subunit Of Molecule B.
           The 50s Subunit Can Be Found In Pdb Entry 3i9c. Molecule
           A In The S Asymmetric Unit Is Deposited As 3i9d (30s)
           And 3i9e (50s)
 gi|294979645|pdb|3I9D|G Chain G, Initiation Complex Of 70s Ribosome With Two Trnas And
           Mrna. 3i9d Contains 30s Ribosomal Subunit Of Molecule A.
           The 50s Subunit Can Be Found In Pdb Entry 3i9e. Molecule
           B In The S Asymmetric Unit Is Deposited As 3i9b (30s)
           And 3i9c (50s)
 gi|295982078|pdb|2X9R|D Chain D, Structure Of The 70s Ribosome Bound To Release Factor 2
           And A Substrate Analog Provides Insights Into Catalysis
           Of Peptide Release
 gi|295982137|pdb|2X9T|D Chain D, Structure Of The 70s Ribosome Bound To Release Factor 2
           And A Substrate Analog Provides Insights Into Catalysis
           Of Peptide Release
 gi|307567965|pdb|2XFZ|D Chain D, Structure Of Cytotoxic Domain Of Colicin E3 Bound To The
           70s Ribosome (Part 1 Of 4)
 gi|307568023|pdb|2XG1|D Chain D, Structure Of Cytotoxic Domain Of Colicin E3 Bound To The
           70s Ribosome (Part 3 Of 4)
 gi|307776615|pdb|3OTO|D Chain D, Crystal Structure Of The 30s Ribosomal Subunit From A Ksga
           Mutant Of Thermus Thermophilus (Hb8)
 gi|309320238|pdb|3OGE|D Chain D, Structure Of The Thermus Thermophilus Ribosome Complexed
           With Chloramphenicol. This File Contains The 30s Subunit
           Of One 70s Ribosome. The Entire Crystal Structure
           Contains Two 70s Ribosomes.
 gi|309320259|pdb|3OGY|D Chain D, Structure Of The Thermus Thermophilus Ribosome Complexed
           With Chloramphenicol. This File Contains The 30s Subunit
           Of One 70s Ribosome. The Entire Crystal Structure
           Contains Two 70s Ribosomes.
 gi|309320340|pdb|3OHC|D Chain D, Structure Of The Thermus Thermophilus Ribosome Complexed
           With Erythromycin. This File Contains The 30s Subunit Of
           One 70s Ribosome. The Entire Crystal Structure Contains
           Two 70s Ribosomes.
 gi|309320361|pdb|3OHD|D Chain D, Structure Of The Thermus Thermophilus Ribosome Complexed
           With Erythromycin. This File Contains The 30s Subunit Of
           One 70s Ribosome. The Entire Crystal Structure Contains
           Two 70s Ribosomes.
 gi|309320442|pdb|3OHY|D Chain D, Structure Of The Thermus Thermophilus 70s Ribosome
           Complexed With Azithromycin. This File Contains The 30s
           Subunit Of One 70s Ribosome. The Entire Crystal
           Structure Contains Two 70s Ribosomes.
 gi|309320493|pdb|3OI0|D Chain D, Structure Of The Thermus Thermophilus 70s Ribosome
           Complexed With Azithromycin. This File Contains The 30s
           Subunit Of One 70s Ribosome. The Entire Crystal
           Structure Contains Two 70s Ribosomes.
 gi|309320544|pdb|3OI2|D Chain D, Structure Of The Thermus Thermophilus 70s Ribosome
           Complexed With Telithromycin. This File Contains The 30s
           Subunit Of One 70s Ribosome. The Entire Crystal
           Structure Contains Two 70s Ribosomes.
 gi|309320595|pdb|3OI4|D Chain D, Structure Of The Thermus Thermophilus 70s Ribosome
           Complexed With Telithromycin. This File Contains The 30s
           Subunit Of One 70s Ribosome. The Entire Crystal
           Structure Contains Two 70s Ribosomes.
 gi|312207676|pdb|2XQD|D Chain D, The Structure Of Ef-Tu And Aminoacyl-Trna Bound To The 70s
           Ribosome With A Gtp Analog
 gi|313754002|pdb|2XSY|D Chain D, Trna Tranlocation On The 70s Ribosome: The Pre-
           Translocational Translocation Intermediate Ti(Pre)
 gi|313754117|pdb|2XUY|D Chain D, Trna Tranlocation On The 70s Ribosome: The Post-
           Translocational Translocation Intermediate Ti(Post)
 gi|325533405|pdb|2Y0U|D Chain D, The Crystal Structure Of Ef-Tu And A9c-Trna-Trp Bound To A
           Near-Cognate Codon On The 70s Ribosome
 gi|325533464|pdb|2Y0W|D Chain D, The Crystal Structure Of Ef-Tu And A9c-Trna-Trp Bound To A
           Near-Cognate Codon On The 70s Ribosome
 gi|325533523|pdb|2Y0Y|D Chain D, The Crystal Structure Of Ef-Tu And G24a-Trna-Trp Bound To
           A Near-Cognate Codon On The 70s Ribosome
 gi|325533582|pdb|2Y10|D Chain D, The Crystal Structure Of Ef-Tu And Trp-Trna-Trp Bound To A
           Cognate Codon On The 70s Ribosome.
 gi|325533641|pdb|2Y12|D Chain D, The Crystal Structure Of Ef-Tu And G24a-Trna-Trp Bound To
           A Near-Cognate Codon On The 70s Ribosome
 gi|325533700|pdb|2Y14|D Chain D, The Crystal Structure Of Ef-Tu And G24a-Trna-Trp Bound To
           A Cognate Codon On The 70s Ribosome.
 gi|325533759|pdb|2Y16|D Chain D, The Crystal Structure Of Ef-Tu And G24a-Trna-Trp Bound To
           A Cognate Codon On The 70s Ribosome.
 gi|325533818|pdb|2Y18|D Chain D, The Crystal Structure Of Ef-Tu And Trp-Trna-Trp Bound To A
           Cognate Codon On The 70s Ribosome.
 gi|4519422|dbj|BAA75548.1| ribosomal protein S4 [Thermus thermophilus]
 gi|46197229|gb|AAS81643.1| SSU ribosomal protein S4P [Thermus thermophilus HB27]
 gi|55773047|dbj|BAD71488.1| 30S ribosomal protein S4 [Thermus thermophilus HB8]
          Length = 209

 Score = 42.5 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 12/79 (15%), Positives = 32/79 (40%), Gaps = 3/79 (3%)

Query: 320 ATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKI 379
                  F+ +   + + T S+    +   +    ++ + GFA S  +AR+ ++   I +
Sbjct: 72  ERQFRNLFEEASKKKGV-TGSVFLGLLESRLD--NVVYRLGFAVSRRQARQLVRHGHITV 128

Query: 380 NNSIISNEKLQIKLQDFDS 398
           N   +     +++  D  +
Sbjct: 129 NGRRVDLPSYRVRPGDEIA 147


>gi|304389969|ref|ZP_07371926.1| tryptophan--tRNA ligase [Mobiluncus curtisii subsp. curtisii ATCC
           35241]
 gi|315657220|ref|ZP_07910104.1| tryptophan--tRNA ligase [Mobiluncus curtisii subsp. holmesii ATCC
           35242]
 gi|304326862|gb|EFL94103.1| tryptophan--tRNA ligase [Mobiluncus curtisii subsp. curtisii ATCC
           35241]
 gi|315492323|gb|EFU81930.1| tryptophan--tRNA ligase [Mobiluncus curtisii subsp. holmesii ATCC
           35242]
          Length = 375

 Score = 42.5 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 34/247 (13%), Positives = 59/247 (23%), Gaps = 41/247 (16%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN 102
            T   LH GH    +     LQ  G     L+          + RD    +   + +   
Sbjct: 48  PTG-FLHIGHYFGTLKTRVDLQNLGIDTTVLIADY----QVITDRDNLGNV--REYVLNL 100

Query: 103 IEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR 162
           +                K+     +    +  +  I  L  +              +   
Sbjct: 101 VADYLAAG-----IDPEKSTIFCHSQIPAIHEMLVI-FLSLVTEAELHRNPTVKAELE-- 152

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL-----GERLK 217
               + +S L   Y + QA D +    N    L   G DQ  ++     L         +
Sbjct: 153 -AAARPMSGLLLTYPVHQAADILCAKAN----LVPVGQDQLPHLEQARVLAKRFNKRYPQ 207

Query: 218 TPKLFA-----LTSPL----------LTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWR 262
                         PL          +    G KM K+    + L           +   
Sbjct: 208 RDPQTGKKTGHGVLPLPQGLLGQGAMILGTDGQKMSKSRHNTVELRASEDDTAKVLKKAV 267

Query: 263 NIDDADV 269
              D  +
Sbjct: 268 TDSDRQI 274


>gi|327403362|ref|YP_004344200.1| ribosomal large subunit pseudouridine synthase B [Fluviicola
           taffensis DSM 16823]
 gi|327318870|gb|AEA43362.1| ribosomal large subunit pseudouridine synthase B [Fluviicola
           taffensis DSM 16823]
          Length = 339

 Score = 42.5 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 15/97 (15%), Positives = 35/97 (36%), Gaps = 8/97 (8%)

Query: 320 ATAAMECFDMSIHSQH-MPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIK 378
              +   F   +     +PT +         + L   +  AG   S  EA   +++  + 
Sbjct: 80  EETSKHIFKPKVRKGDPLPTFN------EDAVRLNKYLSNAGVC-SRREADVLIQTGVVS 132

Query: 379 INNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +N  +I+    +IK  D        ++   K +++ +
Sbjct: 133 VNGEVITEMGYKIKPGDKIQYDGETINAETKRYVLLN 169


>gi|319442907|ref|ZP_07992063.1| tryptophanyl-tRNA synthetase [Corynebacterium variabile DSM 44702]
          Length = 332

 Score = 42.5 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 47/299 (15%), Positives = 89/299 (29%), Gaps = 51/299 (17%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   TA+S H G+    +  +   +  +     +    +I  D    D     +R +   
Sbjct: 7   GIQPTANSYHLGNYLGAVKQWIDLQNDYDAFYFIPNLHAITVDQDPTD-----LRDRTTA 61

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLS-FESV 159
              + +       +     K+   + +       + +  +L  +  F   +RM    +  
Sbjct: 62  GVAQLLA------LGIDPEKSTIFVQSQVPQHAELAW--VLTCLTGFGEASRMTQFKDKS 113

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R     S     F Y +L A D + L       +   G DQ  ++    +L ER    
Sbjct: 114 SKRGAERTSAGL--FMYPMLMAADIL-LYSPQLVPV---GEDQRQHLELTRNLAERFNAR 167

Query: 220 KLFALTSPLLTT--ASG-----------TKMGKTLSGAIWLNKEMTSPYNFWQYWRN-ID 265
             F  T  +       G            KM K+      +   + +P    +  R+ + 
Sbjct: 168 --FGETFVVPDGFIPQGAAKIYDLQEPTAKMSKSGENPKGIVNLLDAPKTSAKRIRSAVT 225

Query: 266 DAD-VVSFAKR--------------LTTLPMSEIDRMAKLQGKEINEAKKIIATEITTM 309
           D D  + + K               LT   + EI    +  G +    K   A  +   
Sbjct: 226 DNDGEIRYDKENKPGVSNLLVIQSALTGRSIDEIVADYQAAGAQYGALKVDTADALEAF 284


>gi|302382935|ref|YP_003818758.1| hemolysin A [Brevundimonas subvibrioides ATCC 15264]
 gi|302193563|gb|ADL01135.1| hemolysin A [Brevundimonas subvibrioides ATCC 15264]
          Length = 241

 Score = 42.5 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 11/64 (17%), Positives = 27/64 (42%), Gaps = 9/64 (14%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIIS------NEKLQIK---LQDFDSTG 400
           M L  L+V  G   S   A+  +++  + ++  +++      ++   +      D+   G
Sbjct: 1   MRLDQLLVSKGLIDSRARAKAAIQAGGVTVDGIVVTNAARAFDDDAIVTVTQAHDWVGRG 60

Query: 401 NIKL 404
            +KL
Sbjct: 61  ALKL 64


>gi|170746519|ref|YP_001752779.1| RNA-binding S4 domain-containing protein [Methylobacterium
           radiotolerans JCM 2831]
 gi|170653041|gb|ACB22096.1| RNA-binding S4 domain protein [Methylobacterium radiotolerans JCM
           2831]
          Length = 601

 Score = 42.5 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 9/53 (16%), Positives = 21/53 (39%), Gaps = 1/53 (1%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
           E   G  +   + +AG A S  +A   + +  + +N   +++    +   D  
Sbjct: 81  ETPPGERIAKAMARAGIA-SRRDAETMIVAGRVSVNGETLTSPARNVTENDRI 132


>gi|228966250|ref|ZP_04127310.1| Tryptophanyl-tRNA synthetase [Bacillus thuringiensis serovar sotto
           str. T04001]
 gi|228793434|gb|EEM40977.1| Tryptophanyl-tRNA synthetase [Bacillus thuringiensis serovar sotto
           str. T04001]
          Length = 345

 Score = 42.5 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 33/185 (17%), Positives = 56/185 (30%), Gaps = 47/185 (25%)

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLF 222
           L+ +  ++   + Y IL A D + L +     +   G DQ  +I    D+         F
Sbjct: 136 LEIDAGVNMGLYTYPILMAADIL-LFQATHVPV---GKDQIQHIEIARDIATYFN--HTF 189

Query: 223 ALTSPL-----------LTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVS 271
             T  L           L    G KM K+    I L  E        +  R +       
Sbjct: 190 GTTFTLPEYVIQEEGAILLGLDGRKMSKSYGNVIPLFAEK-------EKLRKL------- 235

Query: 272 FAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSI 331
             K  T   +              NE K++   E   +++     E    +  E ++  I
Sbjct: 236 IFKIKTDSSL-------------PNEPKEL---ETLFIIYKEFATEAEIQSIREKYETGI 279

Query: 332 HSQHM 336
               +
Sbjct: 280 GWGDV 284


>gi|307151436|ref|YP_003886820.1| hemolysin A [Cyanothece sp. PCC 7822]
 gi|306981664|gb|ADN13545.1| hemolysin A [Cyanothece sp. PCC 7822]
          Length = 270

 Score = 42.5 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 10/51 (19%), Positives = 21/51 (41%), Gaps = 5/51 (9%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
           +V+     S  +A+R +++  +K+N  II     ++          I L  
Sbjct: 10  LVELNLCDSRQQAQRLIRAGEVKVNQQIIDKPGTEVDPS-----AEIVLQA 55


>gi|32474261|ref|NP_867255.1| tryptophanyl-tRNA synthetase [Rhodopirellula baltica SH 1]
 gi|39932073|sp|Q7UQA4|SYW_RHOBA RecName: Full=Tryptophanyl-tRNA synthetase; AltName:
           Full=Tryptophan--tRNA ligase; Short=TrpRS
 gi|32444799|emb|CAD74801.1| tryptophan-tRNA ligase [Rhodopirellula baltica SH 1]
          Length = 320

 Score = 42.5 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 29/175 (16%), Positives = 50/175 (28%), Gaps = 35/175 (20%)

Query: 174 FNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPL----- 228
           F Y +L A D +     YD ++   G DQ  +I    DL         F  T  L     
Sbjct: 122 FTYPVLMAADILA----YDSQIVPVGVDQVQHIEVCRDLAGSFH--HAFGETFVLPKAKT 175

Query: 229 ------LTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNI-------------DDADV 269
                 +    G KM K+ +  +             +    I              D  +
Sbjct: 176 LDVGAKVPGTDGQKMSKSYNNTL---PLFGEVKKIRKQIMRIVTDSRPMEDPKDPTDDHL 232

Query: 270 VSFAKRLT-TLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAA 323
               +       +  +    +  G    E KK +A E++        A++    +
Sbjct: 233 FQLYQLFAGPAEVETMAAKYRAGGFGYGEIKKAVA-EVSEEYFAPARAKREELES 286


>gi|229496471|ref|ZP_04390186.1| ribosomal large subunit pseudouridine synthase B [Porphyromonas
           endodontalis ATCC 35406]
 gi|229316611|gb|EEN82529.1| ribosomal large subunit pseudouridine synthase B [Porphyromonas
           endodontalis ATCC 35406]
          Length = 459

 Score = 42.5 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 28/178 (15%), Positives = 54/178 (30%), Gaps = 18/178 (10%)

Query: 255 YNFWQYWRNIDDADVVSFAKRL---------TTLPMSEIDRMAKLQGKEINEAKKIIATE 305
              +       D  +    + L         +  P   +      Q     + + I   E
Sbjct: 112 EGMFDKLSREADEVIGRTMQMLEQDEPVRTSSHRPTHHVRDRRSSQEGGREDDRPIYPFE 171

Query: 306 ITTMVHGREEA-EKAATAAMECFDMSIHSQHM---PTISISKDEVS----RGMGLLTLIV 357
                H  E   EKA  A           + +   P   IS  E+       + L   + 
Sbjct: 172 RQKKRHNAEPLDEKAQHAGQSPKGKKKKKKKIQRRPEEVISYPEMPVDPKTPLRLNKFLA 231

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
            +G   S   A + +    + +N  I++     +  +DF S     +S  KK +++ +
Sbjct: 232 SSGVC-SRRVADQLIVDGHVSVNGEIVTQLGKHVTREDFISVDGKPVSIEKKIYVLLN 288


>gi|157803888|ref|YP_001492437.1| lysyl-tRNA synthetase [Rickettsia canadensis str. McKiel]
 gi|166229822|sp|A8EZ69|SYK_RICCK RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|157785151|gb|ABV73652.1| lysyl-tRNA synthetase [Rickettsia canadensis str. McKiel]
          Length = 522

 Score = 42.5 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 15/84 (17%), Positives = 26/84 (30%), Gaps = 6/84 (7%)

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            DF           +M G D   N     ++   L       L   L    +G K+ K+ 
Sbjct: 236 PDFGMRWAALKVDYEMYGKDHLANARLYSEICRILGGKPPVQLCYELFLDENGEKISKSK 295

Query: 242 SGAIWLNK-EMTSPYN-----FWQ 259
             +I ++     +P        +Q
Sbjct: 296 GNSISVDDWLKYAPVESMALFMYQ 319


>gi|46201216|ref|ZP_00208014.1| COG1187: 16S rRNA uridine-516 pseudouridylate synthase and related
           pseudouridylate synthases [Magnetospirillum
           magnetotacticum MS-1]
          Length = 294

 Score = 42.5 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 9/51 (17%), Positives = 20/51 (39%), Gaps = 1/51 (1%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
            +G  +   + +AG   S  EA R ++   + +N   + +    +   D  
Sbjct: 4   EKGERIAKRLARAGLC-SRREAERWIEMGRVSVNGKTLDSPACVVGPGDII 53


>gi|309808460|ref|ZP_07702359.1| putative tryptophan--tRNA ligase [Lactobacillus iners LactinV
           01V1-a]
 gi|308168288|gb|EFO70407.1| putative tryptophan--tRNA ligase [Lactobacillus iners LactinV
           01V1-a]
          Length = 227

 Score = 42.5 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 34/225 (15%), Positives = 73/225 (32%), Gaps = 39/225 (17%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     LQ +G + P  ++    ++       D +R        ++
Sbjct: 11  PTGK-LHIGHYIGSLKNRVKLQNSGEYDPYIMIADTQAL------TDNARNP------EK 57

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNR-MLSFESVR 160
               +  +   ++  G     + +          +      ++ +   + R       ++
Sbjct: 58  IKNSLIQVALDYLAVGLDPEKSTIFVQSQIPALFELTAYFMDLVTVARLQRNPTVKNEIK 117

Query: 161 SR-LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
            +       + FL  NY + QA D       +   +   G DQ   +    ++     + 
Sbjct: 118 QKGFNDSLPIGFL--NYPVSQAADITA----FKASIIPVGDDQEPMLEQTREIVRTFNS- 170

Query: 220 KLFA---LTSPL----------LTTASGT-KMGKTLSGAIWLNKE 250
            ++    L  P           L    G  KM K+L+ AI+L+ +
Sbjct: 171 -VYGKEILVEPKGYFPPKGHGRLPGIDGNAKMSKSLNNAIYLSDD 214


>gi|306834898|ref|ZP_07467955.1| S4 domain protein [Corynebacterium accolens ATCC 49726]
 gi|304569197|gb|EFM44705.1| S4 domain protein [Corynebacterium accolens ATCC 49726]
          Length = 93

 Score = 42.5 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 9/61 (14%), Positives = 19/61 (31%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
              + L   I  A    +  EA+  +   A+ +N    +     +++ D           
Sbjct: 8   GESIKLGQFIKLASLVGTGGEAKELIAEGAVTVNGETETRRGATLQIGDEVCIEGTCARV 67

Query: 407 G 407
           G
Sbjct: 68  G 68


>gi|300857883|ref|YP_003782866.1| tryptophanyl-tRNA synthetase [Corynebacterium pseudotuberculosis
           FRC41]
 gi|300685337|gb|ADK28259.1| Tryptophanyl-tRNA synthetase [Corynebacterium pseudotuberculosis
           FRC41]
          Length = 360

 Score = 42.5 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 40/263 (15%), Positives = 86/263 (32%), Gaps = 32/263 (12%)

Query: 19  HQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGT 78
            Q +    +    +        G   TA S H G+    +  +   + G+     +    
Sbjct: 11  KQDTRITIMTESKAVKKQRVLSGIQPTADSYHLGNYLGALKQWIDLQDGYDAFYFIPDLH 70

Query: 79  SIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYI 138
           +I  D   ++     +R + I    + +       +     K+   + ++      + +I
Sbjct: 71  AITVDQDPKE-----LRQRTIAGAAQLLA------LGIDPEKSTLFVQSHVPEHAELGWI 119

Query: 139 DLLREIGSFFSVNRMLS-FESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQM 197
             +  +  F   +RM    +    R     S     F Y +L A D + L +     +  
Sbjct: 120 --MTCLTGFGEASRMTQFKDKSAKRGADRTSAGL--FTYPMLMAADIL-LYRPQLVPV-- 172

Query: 198 GGSDQWGNIICGIDLGERLKT--PKLFALTSPLLTTASGT---------KMGKTLSGAIW 246
            G DQ  ++     L ER  +   K F +   ++   +           KM K+ +    
Sbjct: 173 -GEDQRQHLELTRTLAERFNSRFKKTFVVPEGIIPEGAAKIYDLQDPTSKMSKSGTNPKG 231

Query: 247 LNKEMTSPYNFWQYWRN-IDDAD 268
           L   +  P    +  ++ + D+D
Sbjct: 232 LINLLDEPKVSIKRIKSAVTDSD 254


>gi|317011453|gb|ADU85200.1| tryptophanyl-tRNA synthetase [Helicobacter pylori SouthAfrica7]
          Length = 326

 Score = 42.5 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 37/191 (19%), Positives = 66/191 (34%), Gaps = 39/191 (20%)

Query: 147 FFSVNRMLSFESVR-SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGN 205
             S+  M      +   LK  +S++   FNY IL A D +     Y   L   G DQ  +
Sbjct: 98  QVSMGEMQRMTQFKDKSLKNPKSVNVGLFNYPILMASDILL----YQSDLVPVGEDQKQH 153

Query: 206 IICGIDLGERLKT--PKLFALTSPLLTTASG---------TKMGKTLSG---AIWLNKEM 251
           +    ++ E+      + F +  PL+               KM K+  G   AI+L   +
Sbjct: 154 LELTRNIAEKFNRDFGECFKIPEPLIAKVGARVMGLDEPQVKMSKSHKGANHAIFL---L 210

Query: 252 TSPYNFWQYWRN-IDDAD--------------VVSFAKRLTTLPMSEIDRMAKLQGKEIN 296
             P    +  +    D+               +++    L+      I+   + +G    
Sbjct: 211 DEPDVIVRKIKKATTDSIGTIQFDATREGIFNLLNIYMLLSDESQESIEERFRNKG--YG 268

Query: 297 EAKKIIATEIT 307
           + KK +A  I 
Sbjct: 269 DFKKELAEVII 279


>gi|229541389|ref|ZP_04430449.1| tryptophanyl-tRNA synthetase [Bacillus coagulans 36D1]
 gi|229325809|gb|EEN91484.1| tryptophanyl-tRNA synthetase [Bacillus coagulans 36D1]
          Length = 330

 Score = 42.5 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 48/265 (18%), Positives = 85/265 (32%), Gaps = 47/265 (17%)

Query: 49  LHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKG 108
           +H G+    M  F   +        +    + I  P  R E R+ +RS         I  
Sbjct: 14  IHIGNYLGSMKQFVELQNSFNCYFCIADEHA-ITVPQDRLELRKNIRSLAAFYLAVGIDP 72

Query: 109 IFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQS 168
             ++          A       W        +L+ +     + RM      + +   ++S
Sbjct: 73  NKATLFIQSEVPAHAQ----AAW--------MLQCVAYVGELERMTQ---FKDKSAGKES 117

Query: 169 LSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSP- 227
           +S     Y  L A D +     Y   L   G DQ  ++    DL ER     L   T P 
Sbjct: 118 VSAGLLTYPPLMAADILL----YSTDLVPVGEDQKQHLELTRDLAERFNKRYLEIFTLPD 173

Query: 228 LLTTASG----------TKMGKTLSGAIWLNKEMTSPYNFWQYWRN-IDDAD-VVSFAKR 275
           +  + SG           KM K+          +  P    +  ++ + D++ VV + K 
Sbjct: 174 IKLSNSGARIMSLQDPMKKMSKSDPNKKAFISLLDDPKLVDKKIKSAVTDSEGVVKYDKE 233

Query: 276 --------------LTTLPMSEIDR 286
                          ++L + E++R
Sbjct: 234 RKPGISNLLDIYSNFSSLTIEELER 258


>gi|45544485|emb|CAF34046.1| putative tryptophanyl-tRNA synthatase [Micromonospora echinospora]
          Length = 359

 Score = 42.5 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 37/218 (16%), Positives = 66/218 (30%), Gaps = 27/218 (12%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
            T   LH GH    +         ++   ++     +         +R     ++I    
Sbjct: 12  PTGR-LHLGHYVGSIANRVRLHQRYESFFIIADLHML--------TTRN--TREDISRVA 60

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNR-MLSFESVRSR 162
              + +    +  G     A +              L + + S   + R     E  R+ 
Sbjct: 61  GNAREMVLDILAAGVEPDRATLYLQSAVPEVGDLNTLFQNLVSVPRLERVPSLKEMARAA 120

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT---- 218
            K E     L   Y +LQA D + +  +    +   G D   ++    ++  R       
Sbjct: 121 GKEEMPYGLL--GYPVLQAADILCVRAD----VVPVGRDNAAHVEVTREVARRFNHLYGE 174

Query: 219 -----PKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
                  + A T  L+ T    KM K+L  AI L  E 
Sbjct: 175 VLPVPEMIHAETPTLVGTDGRAKMSKSLGNAIALADEP 212


>gi|41019281|gb|AAR98539.1| GntU [Micromonospora echinospora]
 gi|85814006|emb|CAF31422.1| putative Trp-tRNA ligase [Micromonospora echinospora]
          Length = 359

 Score = 42.5 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 37/218 (16%), Positives = 65/218 (29%), Gaps = 27/218 (12%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
            T   LH GH    +         ++   ++     +         +R     ++I    
Sbjct: 12  PTGR-LHLGHYVGSIANRVRLHQRYESFFIIADLHML--------TTRN--TREDISRVA 60

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNR-MLSFESVRSR 162
              + +    +  G     A                L + + S   + R     E  R+ 
Sbjct: 61  GNAREMVLDILAAGVEPDRATFYLQSAVPEVGDLNTLFQNLVSVPRLERVPSLKEMARAA 120

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT---- 218
            K E     L   Y +LQA D + +  +    +   G D   ++    ++  R       
Sbjct: 121 GKEEMPYGLL--GYPVLQAADILCVRAD----VVPVGRDNAAHVEVTREVARRFNHLYGE 174

Query: 219 -----PKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
                  + A T  L+ T    KM K+L  AI L  E 
Sbjct: 175 VLPVPEMIHAETPTLVGTDGRAKMSKSLGNAIALADEP 212


>gi|218264883|ref|ZP_03478558.1| hypothetical protein PRABACTJOHN_04268 [Parabacteroides johnsonii
           DSM 18315]
 gi|218221722|gb|EEC94372.1| hypothetical protein PRABACTJOHN_04268 [Parabacteroides johnsonii
           DSM 18315]
          Length = 350

 Score = 42.5 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 39/234 (16%), Positives = 73/234 (31%), Gaps = 34/234 (14%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   T + LH G+    +  F   +  +     +    S+   P   D  R  +++   +
Sbjct: 7   GIRPTGN-LHLGNYFGAVKGFLQMQNEYNCFFFIADWHSLTTHPHP-DNIRNSVKTILAE 64

Query: 101 ENIEKIKGIFSSFIKYGT----GKTDALMLNNE---TWLCSIKYIDLLREIGSFFSVNRM 153
                I    ++           +    +  N      + +  + D  R+      VN  
Sbjct: 65  YLACGIDPEKATIYLQSDVREIPELYLYLNMNAGIGELMRTTSFKDKARQQLHIDRVNTT 124

Query: 154 ---LSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGI 210
              +  E        + S+S     Y  L A D +    +   ++ +G  DQ  N+    
Sbjct: 125 EGDVEKEIFNE--GNKHSVSAGLLTYPTLMAADIII---HKAVKVPVG-KDQEQNMEMAR 178

Query: 211 DLGERLK---TPKLF-----------ALTSPLLTTASGTKMGKTLSGAIWLNKE 250
               R       + F           A+  P L  +   KMGK+   AI+L  +
Sbjct: 179 RFARRFNATYGVECFPEPASFYYSSKAIKVPGLDGSG--KMGKSEGNAIYLIDD 230


>gi|288929146|ref|ZP_06422991.1| ribosomal large subunit pseudouridine synthase B [Prevotella sp.
           oral taxon 317 str. F0108]
 gi|288329248|gb|EFC67834.1| ribosomal large subunit pseudouridine synthase B [Prevotella sp.
           oral taxon 317 str. F0108]
          Length = 509

 Score = 42.5 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 13/73 (17%), Positives = 33/73 (45%), Gaps = 5/73 (6%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD--FDSTGNI 402
           + +  + L   +  AG   S  EA + ++S  +K+N ++++    ++   D        +
Sbjct: 269 DPNEPLRLNKFLANAGVC-SRREADQFIQSGMVKVNGNVVTELGTKVLRSDEIIFHDQPV 327

Query: 403 KLSFGKKNHIICH 415
            L   KK +++ +
Sbjct: 328 TLE--KKVYVLIN 338


>gi|298346265|ref|YP_003718952.1| tryptophan--tRNA ligase [Mobiluncus curtisii ATCC 43063]
 gi|315654860|ref|ZP_07907765.1| tryptophan--tRNA ligase [Mobiluncus curtisii ATCC 51333]
 gi|298236326|gb|ADI67458.1| tryptophan--tRNA ligase [Mobiluncus curtisii ATCC 43063]
 gi|315490821|gb|EFU80441.1| tryptophan--tRNA ligase [Mobiluncus curtisii ATCC 51333]
          Length = 375

 Score = 42.5 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 34/247 (13%), Positives = 59/247 (23%), Gaps = 41/247 (16%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN 102
            T   LH GH    +     LQ  G     L+          + RD    +   + +   
Sbjct: 48  PTG-FLHIGHYFGTLKTRVDLQNLGIDTTVLIADY----QVITDRDNLGNV--REYVLNL 100

Query: 103 IEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR 162
           +                K+     +    +  +  I  L  +              +   
Sbjct: 101 VADYLAAG-----IDPEKSTIFCHSQIPAIHEMLVI-FLSLVTEAELHRNPTVKAELE-- 152

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL-----GERLK 217
               + +S L   Y + QA D +    N    L   G DQ  ++     L         +
Sbjct: 153 -AAARPMSGLLLTYPVHQAADILCAKAN----LVPVGQDQLPHLEQARVLAKRFNKRYPQ 207

Query: 218 TPKLFA-----LTSPL----------LTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWR 262
                         PL          +    G KM K+    + L           +   
Sbjct: 208 RDPQTGKKTGHGVLPLPQGLLGQGAMILGTDGQKMSKSRHNTVELRASEDDTAKVLKKAV 267

Query: 263 NIDDADV 269
              D  +
Sbjct: 268 TDSDRQI 274


>gi|300728331|ref|ZP_07061696.1| pseudouridine synthase B, ribosomal large subunit [Prevotella
           bryantii B14]
 gi|299774396|gb|EFI71023.1| pseudouridine synthase B, ribosomal large subunit [Prevotella
           bryantii B14]
          Length = 431

 Score = 42.5 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 12/74 (16%), Positives = 31/74 (41%), Gaps = 1/74 (1%)

Query: 342 SKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
              + +  + L   +  AG   S  EA   +++  I +N  +++    ++   D     +
Sbjct: 188 ENFDPNEPIRLNKYLANAGVC-SRREADEFIQAGVITVNGEVVTELGTKVMRTDEVKFHD 246

Query: 402 IKLSFGKKNHIICH 415
             +S  KK +++ +
Sbjct: 247 QNVSLEKKVYVLLN 260


>gi|258541887|ref|YP_003187320.1| lysyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-01]
 gi|256632965|dbj|BAH98940.1| lysyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-01]
 gi|256636022|dbj|BAI01991.1| lysyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-03]
 gi|256639077|dbj|BAI05039.1| lysyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-07]
 gi|256642131|dbj|BAI08086.1| lysyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-22]
 gi|256645186|dbj|BAI11134.1| lysyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-26]
 gi|256648241|dbj|BAI14182.1| lysyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-32]
 gi|256651294|dbj|BAI17228.1| lysyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-01-42C]
 gi|256654285|dbj|BAI20212.1| lysyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-12]
          Length = 541

 Score = 42.5 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 19/127 (14%), Positives = 40/127 (31%), Gaps = 14/127 (11%)

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           D+           +M G D   ++     + + L       LT  L     G K+ K+  
Sbjct: 245 DWAMRWYALGVDYEMSGKDLIDSVRLSGRICKILGGTPPAGLTYELFLDEKGQKISKSKG 304

Query: 243 GAI----WLNKEMTSPYNFWQYWRNIDDADVVSFA--------KRLTTLPMSEIDRMAKL 290
             +    WL      P +  Q+  N        +         + LT +  +++ +    
Sbjct: 305 NGLSVEEWL--RYAPPESLGQFMFNQPQRAKRLYFDVIPKTADEYLTHVDKAKVLQAENS 362

Query: 291 QGKEINE 297
           +G ++  
Sbjct: 363 KGNDLRA 369


>gi|262371945|ref|ZP_06065224.1| tryptophanyl-tRNA synthetase [Acinetobacter junii SH205]
 gi|262311970|gb|EEY93055.1| tryptophanyl-tRNA synthetase [Acinetobacter junii SH205]
          Length = 337

 Score = 42.5 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 44/261 (16%), Positives = 76/261 (29%), Gaps = 45/261 (17%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
            T   LH GH    +      +  H    L+    ++  +    D+ R       I +  
Sbjct: 16  PTGQ-LHLGHFVGSLRSRVGLQDSHHQHLLLADAQALTDNADNPDKVRN-----NILQVA 69

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR- 162
                +          KT   + +    L  +  +  L  +              ++ R 
Sbjct: 70  LDYLAVG-----IDPTKTTICVQSCLPALNELTML-YLNFVTVARLERNPTIKSEIQMRG 123

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT---- 218
            +R+    FL   Y + QA D       +   +   G DQ   I    ++  R+      
Sbjct: 124 FERDIPAGFL--CYPVAQAADITA----FKATVVPVGEDQIPMIEQTNEIVRRVNRQIGH 177

Query: 219 ---PKLFALTSPL--LTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSF 272
              P+  AL S +  L    G  KM K+L   I                 N  D D+   
Sbjct: 178 DLLPECKALLSNMGRLPGFDGKAKMSKSLGNTI---------------VLNASDKDIKKA 222

Query: 273 AK-RLTTLPMSEIDRMAKLQG 292
                T      I+   +++G
Sbjct: 223 VNAMYTDPNHLRIEDPGQVEG 243


>gi|224536170|ref|ZP_03676709.1| hypothetical protein BACCELL_01036 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224522210|gb|EEF91315.1| hypothetical protein BACCELL_01036 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 364

 Score = 42.5 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 42/247 (17%), Positives = 69/247 (27%), Gaps = 46/247 (18%)

Query: 44  LTASSLHAGHLTQLMLLFW---LQKTGH--KPISLMGGGTSIIGDPSFRDESRRMMRSQE 98
            T   LH GH      L     LQ +G   K    +    ++         +  +   ++
Sbjct: 13  PTGR-LHIGHYVG--SLRRRVELQNSGLYDKIFVFIADAQAL---------TDNVDNPEK 60

Query: 99  IQENIEKIKGIFSSFIKY-----GTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRM 153
           +++N+          + Y        K+   + +    LC + +  +     S    N  
Sbjct: 61  VRQNV------IEVALDYLACGLDPAKSTIFIQSQIAELCELSFYFMNMVTVSRLQRNPT 114

Query: 154 LSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQ----------- 202
           +  E           + F  F Y I Q  D           + +G  DQ           
Sbjct: 115 VKAEIQLRNFDASIPVGF--FTYPISQTADIAAFKA---TTVPVG-EDQEPMLEQAREIV 168

Query: 203 -WGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYW 261
              N I G  L E        A    L  T    KM K+L   I+L+          +  
Sbjct: 169 RRFNYIYGETLVEPEILLPENAACLRLPGTDGKAKMSKSLGNCIYLSDSADEVQKKVKGM 228

Query: 262 RNIDDAD 268
               D  
Sbjct: 229 YTDPDHL 235


>gi|154492036|ref|ZP_02031662.1| hypothetical protein PARMER_01667 [Parabacteroides merdae ATCC
           43184]
 gi|154088277|gb|EDN87322.1| hypothetical protein PARMER_01667 [Parabacteroides merdae ATCC
           43184]
          Length = 350

 Score = 42.5 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 39/234 (16%), Positives = 73/234 (31%), Gaps = 34/234 (14%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   T + LH G+    +  F   +  +     +    S+   P   D  R  +++   +
Sbjct: 7   GIRPTGN-LHLGNYFGAVKGFLQMQNEYNCFFFIADWHSLTTHPHP-DNIRNSVKTILAE 64

Query: 101 ENIEKIKGIFSSFIKYGT----GKTDALMLNNE---TWLCSIKYIDLLREIGSFFSVNRM 153
                I    ++           +    +  N      + +  + D  R+      VN  
Sbjct: 65  YLACGIDPEKATIYLQSDVREIPELYLYLNMNAGIGELMRTTSFKDKARQQLHIDRVNTT 124

Query: 154 ---LSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGI 210
              +  E        + S+S     Y  L A D +    +   ++ +G  DQ  N+    
Sbjct: 125 EGDVEKEIFNE--GNKHSVSAGLLTYPTLMAADIII---HKAVKVPVG-KDQEQNMEMAR 178

Query: 211 DLGERLK---TPKLF-----------ALTSPLLTTASGTKMGKTLSGAIWLNKE 250
               R       + F           A+  P L  +   KMGK+   AI+L  +
Sbjct: 179 RFARRFNATYGVECFPEPASFYYSNKAIKVPGLDGSG--KMGKSEGNAIYLIDD 230


>gi|318079465|ref|ZP_07986797.1| tryptophanyl-tRNA synthetase [Streptomyces sp. SA3_actF]
          Length = 315

 Score = 42.5 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 49/296 (16%), Positives = 92/296 (31%), Gaps = 45/296 (15%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   +A S H G+    +  +   +  H     +    + I  P   D  R   R    Q
Sbjct: 4   GIQPSAGSFHLGNYLGAVRQWVALQESHDAFYTVVDMHA-ITVPQDPDTLRANTRLSAAQ 62

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLS-FESV 159
                I    S+       +  A +     W        ++  +  F   +RM    +  
Sbjct: 63  LLAAGIDPERSALFVQSHVREHAELA----W--------IMNCLTGFGEASRMTQFKDKA 110

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT- 218
             +     ++    F Y +LQ  D + L + +   +   G DQ  ++    DL ER    
Sbjct: 111 AKQGAEGTTVGL--FTYPVLQVADIL-LYQAHQVPV---GEDQRQHVELTRDLAERFNAR 164

Query: 219 -------PKLFAL--TSPLLTTAS-GTKMGKTLSGAIWLNKEMTSPYNFWQYWRN-IDDA 267
                  P+ + L  T+ +        KM K+ +    L   M  P    +  ++ + D 
Sbjct: 165 YGETFVVPEAYILKETAKIYDLQEPSAKMSKSAASPKGLVNLMDEPKATARKIKSAVTDT 224

Query: 268 D------------VVSFAKRLTTLPMSEIDRMAKL-QGKEINEAKKIIATEITTMV 310
           +            V +     + L    +  + +   GK     K  +A  +   V
Sbjct: 225 ETEIRFDRENKPGVSNLLGIYSNLTGVTVQALEEKYAGKGYGALKTDLAEVVVDFV 280


>gi|331220018|ref|XP_003322685.1| tryptophanyl-tRNA synthetase [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
 gi|309301675|gb|EFP78266.1| tryptophanyl-tRNA synthetase [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
          Length = 532

 Score = 42.5 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 17/66 (25%), Positives = 28/66 (42%), Gaps = 1/66 (1%)

Query: 9   LSILSERGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           L  L +RG      +   +  L  QG     Y G   +  S+H GH+   ++  WLQ+  
Sbjct: 200 LHPLLKRGMFFSHRDLDVILNLYEQGKPFYLYTGRGPSTGSMHLGHMVPFIVTQWLQEVF 259

Query: 68  HKPISL 73
             P+ +
Sbjct: 260 DVPLVI 265


>gi|302871910|ref|YP_003840546.1| hemolysin A [Caldicellulosiruptor obsidiansis OB47]
 gi|302574769|gb|ADL42560.1| hemolysin A [Caldicellulosiruptor obsidiansis OB47]
          Length = 269

 Score = 42.5 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 18/40 (45%)

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
           L+V+ G A S  +AR  + S  + +NN  I      I   
Sbjct: 8   LLVEKGLAASREKARALILSGNVYVNNQKIEKAGEMIDES 47


>gi|167037680|ref|YP_001665258.1| tryptophanyl-tRNA synthetase [Thermoanaerobacter pseudethanolicus
           ATCC 33223]
 gi|320116095|ref|YP_004186254.1| tryptophanyl-tRNA synthetase [Thermoanaerobacter brockii subsp.
           finnii Ako-1]
 gi|166856514|gb|ABY94922.1| tryptophanyl-tRNA synthetase [Thermoanaerobacter pseudethanolicus
           ATCC 33223]
 gi|319929186|gb|ADV79871.1| tryptophanyl-tRNA synthetase [Thermoanaerobacter brockii subsp.
           finnii Ako-1]
          Length = 327

 Score = 42.5 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 45/295 (15%), Positives = 98/295 (33%), Gaps = 50/295 (16%)

Query: 37  TAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSII--GDPSFRDESRRMM 94
             + G   +   +H G+    M  F   +  ++         ++    DP       +++
Sbjct: 3   KVFSGVQPSGD-IHIGNYLGAMRQFVALQEDYECFFCAVDLHALTVPQDP-------KVL 54

Query: 95  RSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRML 154
           + + I+             I     K    + ++      + ++  L+ I  F  ++RM 
Sbjct: 55  KEKTIELAA------LYLAIGLDPKKVTIFIQSHVPAHAELAWL--LQCITYFGELSRMT 106

Query: 155 SFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
                + + K ++S+S   F Y  L A D + L   +   +   G DQ  ++    D+ +
Sbjct: 107 Q---FKDKSKGKESVSVGLFTYPDLMAADIL-LYNTHYVPV---GEDQKQHLELTRDIAQ 159

Query: 215 RLKT--PKLFALTSPLLTTASG---------TKMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
           R      + F +  P++               KM K+ S        +  P    +    
Sbjct: 160 RFNNRFGETFVVPEPMILKLGARIMSLTDPTKKMSKSDSDPNNRINLLDEPSVIKKKIMR 219

Query: 264 -IDDAD------------VVSFAKRLTTLPMSEIDR-MAKLQGKEINEAKKIIAT 304
            + D++            V +     +     EI+  + K +G+     KK +A 
Sbjct: 220 AVTDSETEIKLDWENKPGVSNLLTIYSLFTGMEIEEVVNKFKGQGYGTLKKELAE 274


>gi|327542741|gb|EGF29207.1| tryptophanyl-tRNA synthetase [Rhodopirellula baltica WH47]
          Length = 320

 Score = 42.5 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 29/175 (16%), Positives = 50/175 (28%), Gaps = 35/175 (20%)

Query: 174 FNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPL----- 228
           F Y +L A D +     YD ++   G DQ  +I    DL         F  T  L     
Sbjct: 122 FTYPVLMAADILA----YDSQIVPVGVDQVQHIEVCRDLAGSFH--HAFGETFVLPKAKT 175

Query: 229 ------LTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNI-------------DDADV 269
                 +    G KM K+ +  +             +    I              D  +
Sbjct: 176 LDVGAKVPGTDGQKMSKSYNNTL---PLFGEVKKIRKQIMRIVTDSRPMEDPKDPADDHL 232

Query: 270 VSFAKRLT-TLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAA 323
               +       +  +    +  G    E KK +A E++        A++    +
Sbjct: 233 FQLYQLFAGPAEVEAMAAKYRAGGFGYGEIKKAVA-EVSEEYFAPARAKREELES 286


>gi|218898429|ref|YP_002446840.1| putative tryptophanyl-tRNA synthetase [Bacillus cereus G9842]
 gi|218541824|gb|ACK94218.1| putative tryptophanyl-tRNA synthetase [Bacillus cereus G9842]
          Length = 332

 Score = 42.5 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 23/100 (23%), Positives = 34/100 (34%), Gaps = 17/100 (17%)

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLF 222
           L+ +  ++   + Y IL A D + L +     +   G DQ  +I    D+         F
Sbjct: 123 LEIDAGVNMGLYTYPILMAADIL-LFQATHVPV---GKDQIQHIEIARDIATYFN--HTF 176

Query: 223 ALTSPL-----------LTTASGTKMGKTLSGAIWLNKEM 251
             T  L           L    G KM K+    I L  E 
Sbjct: 177 GTTFTLPEYVIQEEGAILLGLDGRKMSKSYGNVIPLFAEK 216


>gi|104783479|ref|YP_609977.1| tryptophanyl-tRNA synthetase [Pseudomonas entomophila L48]
 gi|95112466|emb|CAK17193.1| tryptophanyl-tRNA synthetase TrpS [Pseudomonas entomophila L48]
          Length = 449

 Score = 42.5 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 22/94 (23%), Positives = 38/94 (40%), Gaps = 16/94 (17%)

Query: 166 EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL-----KTPK 220
           +  ++   F+Y +L A D +    N   ++ +G  DQ  ++    D+G+R      +   
Sbjct: 126 DAGVTMGLFSYPVLMAADILMFNAN---KVPVG-RDQIQHVEMARDIGQRFNHLFGQGKD 181

Query: 221 LFAL-------TSPLLTTASGTKMGKTLSGAIWL 247
            FAL       +   L    G KM K+    I L
Sbjct: 182 FFALPEAVIEESVATLPGLDGRKMSKSYDNTIPL 215


>gi|125973211|ref|YP_001037121.1| ribosomal large subunit pseudouridine synthase B [Clostridium
           thermocellum ATCC 27405]
 gi|256003686|ref|ZP_05428674.1| pseudouridine synthase [Clostridium thermocellum DSM 2360]
 gi|281417410|ref|ZP_06248430.1| pseudouridine synthase [Clostridium thermocellum JW20]
 gi|125713436|gb|ABN51928.1| ribosomal large subunit pseudouridine synthase B [Clostridium
           thermocellum ATCC 27405]
 gi|255992247|gb|EEU02341.1| pseudouridine synthase [Clostridium thermocellum DSM 2360]
 gi|281408812|gb|EFB39070.1| pseudouridine synthase [Clostridium thermocellum JW20]
 gi|316940559|gb|ADU74593.1| pseudouridine synthase [Clostridium thermocellum DSM 1313]
          Length = 239

 Score = 42.5 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 10/66 (15%), Positives = 23/66 (34%), Gaps = 1/66 (1%)

Query: 348 RGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFG 407
           + M L   + + G   S  +A   +    +K+N   ++    ++   D        +   
Sbjct: 2   KEMRLQKYLAECG-VASRRKAEELISQGRVKVNGETVTQMGKKVSQNDVVEVDGKLVKME 60

Query: 408 KKNHII 413
           K+   I
Sbjct: 61  KRKVYI 66


>gi|312135105|ref|YP_004002443.1| hemolysin a [Caldicellulosiruptor owensensis OL]
 gi|311775156|gb|ADQ04643.1| hemolysin A [Caldicellulosiruptor owensensis OL]
          Length = 269

 Score = 42.5 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 18/40 (45%)

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
           L+V+ G A S  +AR  + S  + +NN  I      I   
Sbjct: 8   LLVEKGLAASREKARALILSGNVYVNNQKIEKAGEMIDES 47


>gi|301100844|ref|XP_002899511.1| tryptophanyl-tRNA synthetase [Phytophthora infestans T30-4]
 gi|262103819|gb|EEY61871.1| tryptophanyl-tRNA synthetase [Phytophthora infestans T30-4]
          Length = 537

 Score = 42.5 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 22/101 (21%), Positives = 34/101 (33%), Gaps = 1/101 (0%)

Query: 15  RGFIHQISNPR-ELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG+     +    LD          Y G   ++ SLH GHL       WLQK    P+ +
Sbjct: 206 RGYFFSHRDLDVILDAYEKGEKFFLYTGRGPSSGSLHMGHLIPFTFTAWLQKVFDVPLVI 265

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFI 114
                          E   +M  +  ++ I     +  +FI
Sbjct: 266 QLTNDEKFLFKDQTLEESEVMAWENAKDIIACGFDVKKTFI 306


>gi|238855582|ref|ZP_04645884.1| tryptophan-tRNA ligase [Lactobacillus jensenii 269-3]
 gi|260664774|ref|ZP_05865625.1| tryptophanyl-tRNA synthetase [Lactobacillus jensenii SJ-7A-US]
 gi|282932732|ref|ZP_06338140.1| tryptophan--tRNA ligase [Lactobacillus jensenii 208-1]
 gi|238831799|gb|EEQ24134.1| tryptophan-tRNA ligase [Lactobacillus jensenii 269-3]
 gi|260561257|gb|EEX27230.1| tryptophanyl-tRNA synthetase [Lactobacillus jensenii SJ-7A-US]
 gi|281303142|gb|EFA95336.1| tryptophan--tRNA ligase [Lactobacillus jensenii 208-1]
          Length = 341

 Score = 42.5 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 38/222 (17%), Positives = 64/222 (28%), Gaps = 31/222 (13%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     LQ  G + P  ++    ++  +    ++ R  +    +  
Sbjct: 12  PTGR-LHIGHYIGSLKNRVILQNEGKYDPYIMIADTQALTDNARNPEKIRNSLIEVALDY 70

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
               I         +   +  AL      +L  +    L R        N  +  E  + 
Sbjct: 71  LAVGIDP--EKSTIFVQSQIPALFELTAYYLDLVTVARLER--------NPTVKTEIKQK 120

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--- 218
                    FL   Y + QA D       +   L   G DQ   +    ++         
Sbjct: 121 NFNESIPAGFL--TYPVSQAADITA----FKATLIPVGDDQEPMMEQTREIVRTFNRLYN 174

Query: 219 ----PKLFALTSPL----LTTASGT-KMGKTLSGAIWLNKEM 251
                +      P     L    G  KM K+L  AI+L  + 
Sbjct: 175 TDILKEPKGYFPPKGQGRLPGLDGNAKMSKSLGNAIYLADDA 216


>gi|239618238|ref|YP_002941560.1| ribosomal protein S4 [Kosmotoga olearia TBF 19.5.1]
 gi|259495284|sp|C5CGH5|RS4_KOSOT RecName: Full=30S ribosomal protein S4
 gi|239507069|gb|ACR80556.1| ribosomal protein S4 [Kosmotoga olearia TBF 19.5.1]
          Length = 208

 Score = 42.5 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 18/42 (42%)

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
           GFA+S  +AR+ +    + +N   ++     ++  D      
Sbjct: 108 GFASSRKQARQLVSHGHVLVNGRKVNKASYSVRPGDIIEIKE 149


>gi|254460259|ref|ZP_05073675.1| lysyl-tRNA synthetase [Rhodobacterales bacterium HTCC2083]
 gi|206676848|gb|EDZ41335.1| lysyl-tRNA synthetase [Rhodobacteraceae bacterium HTCC2083]
          Length = 516

 Score = 42.5 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 18/85 (21%), Positives = 26/85 (30%), Gaps = 6/85 (7%)

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            DF           +M G D   N      +   L  P     T  L    +G K+ KT 
Sbjct: 228 PDFGARWAALGVDFEMYGKDHSTNTPIYDKICRILGMPAPEHFTYELFLDENGQKISKTS 287

Query: 242 SGAI----WLN--KEMTSPYNFWQY 260
              +    WL+     +  Y  +Q 
Sbjct: 288 GNGVSIDQWLSYASSESLSYFMYQK 312


>gi|167648594|ref|YP_001686257.1| RNA-binding S4 domain-containing protein [Caulobacter sp. K31]
 gi|167351024|gb|ABZ73759.1| RNA-binding S4 domain protein [Caulobacter sp. K31]
          Length = 501

 Score = 42.1 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 8/55 (14%), Positives = 25/55 (45%), Gaps = 1/55 (1%)

Query: 343 KDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
           +D+   G  +  ++ +AG   S     R ++   + +N  +++   ++++  D  
Sbjct: 17  QDDDGEGARVAKMLARAG-VASRRAVERLIEDGRVALNGEVLTTPAIKVRPGDIL 70


>gi|225174878|ref|ZP_03728875.1| hemolysin A [Dethiobacter alkaliphilus AHT 1]
 gi|225169518|gb|EEG78315.1| hemolysin A [Dethiobacter alkaliphilus AHT 1]
          Length = 273

 Score = 42.1 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 7/54 (12%), Positives = 19/54 (35%), Gaps = 2/54 (3%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNI--KLSFG 407
           +  AG   S + AR  + +  + ++   +      + +        +   +S G
Sbjct: 12  LTDAGLFPSRSAARAAVMAGLVTVDGQRVDKPGTAVSVDAAVDVRELPRYVSRG 65


>gi|182419189|ref|ZP_02950442.1| tryptophanyl-tRNA synthetase [Clostridium butyricum 5521]
 gi|237668767|ref|ZP_04528751.1| tryptophan--tRNA ligase [Clostridium butyricum E4 str. BoNT E
           BL5262]
 gi|182376829|gb|EDT74400.1| tryptophanyl-tRNA synthetase [Clostridium butyricum 5521]
 gi|237657115|gb|EEP54671.1| tryptophan--tRNA ligase [Clostridium butyricum E4 str. BoNT E
           BL5262]
          Length = 338

 Score = 42.1 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 33/235 (14%), Positives = 72/235 (30%), Gaps = 34/235 (14%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     LQ++G ++   ++    ++  +    ++ RR +    +  
Sbjct: 12  PTGK-LHIGHYIGSLKNRVQLQESGEYESFIMIADQQALTDNARDPEKIRRSLTEVALDY 70

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
               +             ++   + +    L  +    L     S    N  +  E  + 
Sbjct: 71  LAVGL----------DPARSTIFVQSQLPELHELTMHYLNLVTLSRLERNPTVKSEIKQK 120

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--- 218
             +      FL   Y + QA D           + +G  DQ   I    ++     +   
Sbjct: 121 NYENSIPAGFL--IYPVSQAADITAFKA---TTVPVG-EDQLPMIEQTREIVRSFNSLYG 174

Query: 219 ----PKLFAL----TSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNI 264
                    +    T   L    G  KM K++   I+L+ +  +     +   ++
Sbjct: 175 EVLVEPEAVIPKNDTCGRLPGTDGKAKMSKSIGNCIYLSDDADT---IKKKVMSM 226


>gi|32401310|gb|AAP80827.1| tryptophanyl-tRNA synthetase [Griffithsia japonica]
          Length = 165

 Score = 42.1 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 14/60 (23%), Positives = 23/60 (38%), Gaps = 1/60 (1%)

Query: 15  RGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +   L      G     Y G   +++S+H GHL   +   +LQ     P+ +
Sbjct: 89  RGIFFSHRDLNALLDRFEAGTPFYLYTGRGPSSTSMHVGHLIPFIFTAYLQAAFKCPVVI 148


>gi|103487496|ref|YP_617057.1| tryptophanyl-tRNA synthetase [Sphingopyxis alaskensis RB2256]
 gi|98977573|gb|ABF53724.1| tryptophanyl-tRNA synthetase [Sphingopyxis alaskensis RB2256]
          Length = 332

 Score = 42.1 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 52/297 (17%), Positives = 89/297 (29%), Gaps = 54/297 (18%)

Query: 41  GYDLTASSLHAGHLT-QLMLLFWLQKT--GHKPISLMGGGTSII-GDPSFRDESRRMMRS 96
           G   T + LH G+    +     +Q    G K   L       +  DP+    + R M +
Sbjct: 6   GIQPTGN-LHLGNYLGAIRNWVRMQDAMEGEKLYFLADLHAITVHNDPAELTANTREMAA 64

Query: 97  QEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSF 156
             +   I+  K I  +  +       A +               L        +NRM  F
Sbjct: 65  ALMAAGIDPAKAILFNQARVPAHAELAWL---------------LFCTARIGWLNRMTQF 109

Query: 157 ESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL 216
           +    + +   S+    F Y +LQA D + L +     +   G DQ  ++    D+  + 
Sbjct: 110 KEKSGKNREGASVGL--FAYPVLQAADVL-LYQTTHVPV---GDDQKQHLELARDIATKF 163

Query: 217 K---TPKLFALTSPLLTT--------ASGT-KMGKTLSGAIWLNKEMTSPYNFWQ-YWRN 263
                   F L  P +            G  KM K+             P +  +    +
Sbjct: 164 NLDTGTDTFTLPEPTIPATAARIMSLRDGNAKMSKS------------DPSDMSRINLVD 211

Query: 264 IDDADVVSFAKRLTT---LPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAE 317
             D  +    K  T    LP        + + K +      +A E    V  R   +
Sbjct: 212 DPDTIMAKIRKAKTDPEPLPSEAAGLEGRPEAKNLVSIYAAMADESVDQVLARFAGQ 268


>gi|225376831|ref|ZP_03754052.1| hypothetical protein ROSEINA2194_02473 [Roseburia inulinivorans DSM
           16841]
 gi|225211327|gb|EEG93681.1| hypothetical protein ROSEINA2194_02473 [Roseburia inulinivorans DSM
           16841]
          Length = 365

 Score = 42.1 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 44/279 (15%), Positives = 80/279 (28%), Gaps = 46/279 (16%)

Query: 32  SQGVVTAYIGYDLTASSLHAGHLTQLMLLF-WLQKTGH--KPISLMGGGTSIIGDPSFRD 88
           ++       G   T   LH GH    +     LQ +G   K   ++    ++  +     
Sbjct: 3   NKKPKIILTGDRPTGK-LHVGHYVGSLKRRVELQNSGEFDKIFIMIADAQALTDNADNPA 61

Query: 89  ESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFF 148
           + R       I E       +          K++  + ++   L  + +  +     S  
Sbjct: 62  KIR-----DNIMEVALDYLSVG-----LDPAKSNIFIQSHVAELTELTFYYMNLVTVSRL 111

Query: 149 SVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQ------ 202
             N  +  E      +    + F  FNY I QA D           + +G  DQ      
Sbjct: 112 QRNPTVKAEIQMRNFETSIPMGF--FNYPISQAADITAFKA---TTVPVG-EDQLPMLEQ 165

Query: 203 ------WGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYN 256
                   N + G  L +             L       KM K+L   I+L++      +
Sbjct: 166 TKEIVHKFNAVYGETLVDPEILLPSNKACLRLPGIDGKAKMSKSLGNCIYLSESEA---D 222

Query: 257 FWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI 295
             +   +             T      I+   KL+G  +
Sbjct: 223 VKKKVMS-----------MFTDPDHIRIEDPGKLEGNTV 250


>gi|146278267|ref|YP_001168426.1| RNA-binding S4 domain-containing protein [Rhodobacter sphaeroides
           ATCC 17025]
 gi|145556508|gb|ABP71121.1| RNA-binding S4 domain protein [Rhodobacter sphaeroides ATCC 17025]
          Length = 466

 Score = 42.1 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 10/53 (18%), Positives = 24/53 (45%), Gaps = 1/53 (1%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
           + + G  +  ++ +AG   S  +A R ++   + +N   I +  L +  +D  
Sbjct: 3   DSTDGERIAKVLSRAG-VASRRDAERMIELGRVAVNGRTIDSPALNVGPKDRI 54


>gi|58040335|ref|YP_192299.1| lysyl-tRNA synthetase [Gluconobacter oxydans 621H]
 gi|58002749|gb|AAW61643.1| Lysyl-tRNA synthetase [Gluconobacter oxydans 621H]
          Length = 543

 Score = 42.1 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 22/134 (16%), Positives = 37/134 (27%), Gaps = 10/134 (7%)

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           D+           +M G D   ++     +   L       LT  L   A G K+ K+  
Sbjct: 248 DWAMRWYALGVDYEMSGKDLIDSVKLSSKICRILGKEPPAGLTYELFLDAQGQKISKSKG 307

Query: 243 GAI----WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEA 298
             +    WL     +P +  QY             +    +     D    L  K   + 
Sbjct: 308 NGLSVEEWL--RYGTPESLAQYMFQQP----TRAKRLFFDVIPRATDDYLTLVQKAETQE 361

Query: 299 KKIIATEITTMVHG 312
              +       +HG
Sbjct: 362 GPELMANPVWFIHG 375


>gi|220929165|ref|YP_002506074.1| pseudouridine synthase [Clostridium cellulolyticum H10]
 gi|219999493|gb|ACL76094.1| pseudouridine synthase [Clostridium cellulolyticum H10]
          Length = 235

 Score = 42.1 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 24/58 (41%), Gaps = 3/58 (5%)

Query: 349 GMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF--DSTGNIKL 404
           G+ L   I  AG   S   A   +K   + +NN+++ +    +   DF       +K+
Sbjct: 3   GIRLQKFIAHAG-VASRRTAEEMIKQGRVAVNNTVVQDMGFTVSNDDFVTVDGKPVKI 59


>gi|254718615|ref|ZP_05180426.1| Cell division protein FtsJ [Brucella sp. 83/13]
 gi|265983592|ref|ZP_06096327.1| hemolysin A [Brucella sp. 83/13]
 gi|306839867|ref|ZP_07472665.1| hemolysin A [Brucella sp. NF 2653]
 gi|264662184|gb|EEZ32445.1| hemolysin A [Brucella sp. 83/13]
 gi|306405053|gb|EFM61334.1| hemolysin A [Brucella sp. NF 2653]
          Length = 253

 Score = 42.1 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 8/45 (17%), Positives = 20/45 (44%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
            L+V+ GF  + + AR  ++   +K++   I+     +      +
Sbjct: 14  QLLVERGFFATRSRARDAIQRGTVKVDGRPITKPGQMVASDAALA 58


>gi|315425010|dbj|BAJ46684.1| tyrosyl-tRNA synthetase [Candidatus Caldiarchaeum subterraneum]
          Length = 363

 Score = 42.1 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 43/245 (17%), Positives = 83/245 (33%), Gaps = 42/245 (17%)

Query: 19  HQISNPRELDILCSQGVVT-AYIGYDLTASSLHAGH----LTQLMLLFWLQKTGHKPISL 73
            ++  P EL  L        AY G++ +       H    L + + L  + + G +   L
Sbjct: 16  EEVLTPEELRALLETEASPIAYDGFEPSG----LAHIPFALLRAIKLRDMLEAGCRFKLL 71

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
           +    + I      D        ++I++  E    ++ +    G   +   ++       
Sbjct: 72  LADWHAAINRKMGGD-------LEKIRKVGEYFVEVWKAS---GIDTSRVEIVWASDLAA 121

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDC 193
              Y  L+ E+    ++ R+L    +  R K  +     +  Y  +Q  D  +L     C
Sbjct: 122 DRDYWRLVIEVLQNTTLRRVLRCLPIMGR-KEGELQEAAQLLYPGMQVADIFKLEAKI-C 179

Query: 194 RLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG------------------T 235
           +L   G DQ    I   ++G +L   K  A+   +L    G                  +
Sbjct: 180 QL---GLDQRRANILAREIGPKLGFWKPVAVHHHMLMGLEGPTGPKGLEEEENLDIQISS 236

Query: 236 KMGKT 240
           KM K+
Sbjct: 237 KMSKS 241


>gi|312129114|ref|YP_003996454.1| tryptophanyl-tRNA synthetase [Leadbetterella byssophila DSM 17132]
 gi|311905660|gb|ADQ16101.1| tryptophanyl-tRNA synthetase [Leadbetterella byssophila DSM 17132]
          Length = 324

 Score = 42.1 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 29/161 (18%), Positives = 52/161 (32%), Gaps = 32/161 (19%)

Query: 174 FNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKLFALTSP---- 227
           F Y +L   D + L +     +   G DQ  ++    D+ E       ++F + +P    
Sbjct: 126 FTYPVLMTAD-IILYQADFVPV---GKDQKQHLEIAKDIAEVFNRVYGEVFKIPAPFINE 181

Query: 228 ---LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRN--IDDA---------DVVSFA 273
               +    G KM K+ +  I    ++  P N         + DA         D  +  
Sbjct: 182 EVMTIPGIDGAKMSKSYNNYI----DIFLPENELNKVVKKIVSDATPLEEPKNPDTDNTF 237

Query: 274 KRLTTLPMSEIDRMAKLQ----GKEINEAKKIIATEITTMV 310
           K  + +   E     +      G     AKK +   + T  
Sbjct: 238 KIFSLVGTPEQVETMRQNYLAGGYGYGHAKKELFETLLTRF 278


>gi|226228370|ref|YP_002762476.1| tryptophanyl-tRNA synthetase [Gemmatimonas aurantiaca T-27]
 gi|226091561|dbj|BAH40006.1| tryptophanyl-tRNA synthetase [Gemmatimonas aurantiaca T-27]
          Length = 361

 Score = 42.1 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 34/216 (15%), Positives = 65/216 (30%), Gaps = 28/216 (12%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
            T   LH GH    +      +       ++    ++       +  R    +  ++E +
Sbjct: 42  PTGR-LHLGHYAGSLQSRLALQGRCAQTIVVADLQALTD-----NAGRPAHVAAHVREVV 95

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR- 162
                +          +T   + +    L  +  +  L  +              +  R 
Sbjct: 96  SDYLAVG-----LDPAQTTIALQSRLPALAELTML-YLNLVTVARLERNPTVRAEIEMRG 149

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT---- 218
             R+    FL   Y + QA D       +   +   G DQ   I    ++  R+      
Sbjct: 150 FARDIPAGFL--CYPVSQAADITA----FRATVVPVGEDQLPMIELSNEIVRRVNRTTGT 203

Query: 219 ---PKLFALT--SPLLTTASGTKMGKTLSGAIWLNK 249
              P+  A+   +P L    G K  K+L  AI L+ 
Sbjct: 204 EVLPECRAMLSDTPRLPGIDGRKASKSLGNAISLSA 239


>gi|154251100|ref|YP_001411924.1| RNA-binding S4 domain-containing protein [Parvibaculum
           lavamentivorans DS-1]
 gi|154155050|gb|ABS62267.1| RNA-binding S4 domain protein [Parvibaculum lavamentivorans DS-1]
          Length = 327

 Score = 42.1 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 11/67 (16%), Positives = 26/67 (38%), Gaps = 7/67 (10%)

Query: 342 SKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
           S  +   G  +  +I +AG   S  EA + ++   + ++  ++ +  L +          
Sbjct: 7   SSPDTPAGDRIAKVIARAGIC-SRREAEKLIEEGRVTVDGKVLKSPALNVT------GRE 59

Query: 402 IKLSFGK 408
             +  GK
Sbjct: 60  TIIVDGK 66


>gi|322372156|ref|ZP_08046697.1| 30S ribosomal protein S4e [Haladaptatus paucihalophilus DX253]
 gi|320548165|gb|EFW89838.1| 30S ribosomal protein S4e [Haladaptatus paucihalophilus DX253]
          Length = 233

 Score = 42.1 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 1/52 (1%)

Query: 348 RGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
            G+ LL ++    G+A S  EAR  L  +A+ +N   +S+E+  I + D  +
Sbjct: 35  DGVPLLIIMRDVLGYAASKKEARYALNQDAVLVNGQSVSDEQRPIGMFDILA 86


>gi|315426697|dbj|BAJ48322.1| tyrosyl-tRNA synthetase [Candidatus Caldiarchaeum subterraneum]
          Length = 363

 Score = 42.1 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 43/245 (17%), Positives = 83/245 (33%), Gaps = 42/245 (17%)

Query: 19  HQISNPRELDILCSQGVVT-AYIGYDLTASSLHAGH----LTQLMLLFWLQKTGHKPISL 73
            ++  P EL  L        AY G++ +       H    L + + L  + + G +   L
Sbjct: 16  EEVLTPEELRALLETEASPIAYDGFEPSG----LAHIPFALLRAIKLRDMLEAGCRFKLL 71

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
           +    + I      D        ++I++  E    ++ +    G   +   ++       
Sbjct: 72  LADWHAAINRKMGGD-------LEKIRKVGEYFVEVWKAS---GIDTSRVEIVWASDLAA 121

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDC 193
              Y  L+ E+    ++ R+L    +  R K  +     +  Y  +Q  D  +L     C
Sbjct: 122 DRDYWRLVIEVLQNTTLRRVLRCLPIMGR-KEGELQEAAQLLYPGMQVADIFKLEAKI-C 179

Query: 194 RLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG------------------T 235
           +L   G DQ    I   ++G +L   K  A+   +L    G                  +
Sbjct: 180 QL---GLDQRRANILAREIGPKLGFWKPVAVHHHMLMGLEGPTGPKGLEEEENLDIQISS 236

Query: 236 KMGKT 240
           KM K+
Sbjct: 237 KMSKS 241


>gi|296532327|ref|ZP_06895065.1| lysyl-tRNA synthetase [Roseomonas cervicalis ATCC 49957]
 gi|296267351|gb|EFH13238.1| lysyl-tRNA synthetase [Roseomonas cervicalis ATCC 49957]
          Length = 548

 Score = 42.1 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 15/83 (18%), Positives = 28/83 (33%), Gaps = 6/83 (7%)

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           D+           +M G D   ++     +   L      ++T  L   A+G K+ K+  
Sbjct: 235 DWAMRWYALGVDYEMSGKDLIDSVKLSSAICRVLGAEPPVSMTYELFLDANGQKISKSKG 294

Query: 243 GAI----WL--NKEMTSPYNFWQ 259
             +    WL      +  Y  +Q
Sbjct: 295 NGLTIEEWLRYAPPESLAYFMYQ 317


>gi|170094786|ref|XP_001878614.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164647068|gb|EDR11313.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 429

 Score = 42.1 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 13/60 (21%), Positives = 21/60 (35%), Gaps = 1/60 (1%)

Query: 15  RGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG           L+          Y G   ++ S+H GH+   +   WLQ     P+ +
Sbjct: 88  RGMFFSHREFDAILNRYEQGKPFFLYTGRGPSSDSMHLGHMVPFVFTKWLQDVFEVPLVI 147


>gi|309389907|gb|ADO77787.1| SSU ribosomal protein S4P [Halanaerobium praevalens DSM 2228]
          Length = 208

 Score = 42.1 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 20/109 (18%), Positives = 42/109 (38%), Gaps = 14/109 (12%)

Query: 292 GKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMG 351
           G ++ E +K+        ++G  E           F+    ++++  ++           
Sbjct: 54  GTQLREKQKV------RRIYGIME-----KQFRNYFEK---AENIAGVTGENFLQLLERR 99

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG 400
           L  ++ + GFA+S NEAR+ +    I +N   +     QI + D     
Sbjct: 100 LDNVVYRMGFASSRNEARQFVLHGHITVNGRKVDIPSYQIDIDDEIKVK 148


>gi|303242311|ref|ZP_07328797.1| pseudouridine synthase [Acetivibrio cellulolyticus CD2]
 gi|302590150|gb|EFL59912.1| pseudouridine synthase [Acetivibrio cellulolyticus CD2]
          Length = 237

 Score = 42.1 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 12/65 (18%), Positives = 27/65 (41%), Gaps = 2/65 (3%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLS-FGKKN 410
           L   I   G   S  +A   ++  ++K+N  ++S   +++   D        +    KK 
Sbjct: 6   LQKYIADCG-VASRRKAEELIQQGSVKVNGIVVSEMGIKVSSSDRVEVNGSVIKPESKKV 64

Query: 411 HIICH 415
           +I+ +
Sbjct: 65  YILLN 69


>gi|284037794|ref|YP_003387724.1| tryptophanyl-tRNA synthetase [Spirosoma linguale DSM 74]
 gi|283817087|gb|ADB38925.1| tryptophanyl-tRNA synthetase [Spirosoma linguale DSM 74]
          Length = 325

 Score = 42.1 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 21/85 (24%), Positives = 30/85 (35%), Gaps = 20/85 (23%)

Query: 174 FNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK---TPKLFA------- 223
           F Y +LQA D +     YD  +   G DQ  +I    D+           +F        
Sbjct: 126 FVYPVLQAADILL----YDAEIIPVGKDQRQHIEMTRDIASAFNRQYDEDVFVLPEARID 181

Query: 224 ---LTSPLLTTASGTKMGKTLSGAI 245
              +T P      G KM K+ +  I
Sbjct: 182 DRLMTIP---GIDGAKMSKSYNNYI 203


>gi|198277516|ref|ZP_03210047.1| hypothetical protein BACPLE_03738 [Bacteroides plebeius DSM 17135]
 gi|198270014|gb|EDY94284.1| hypothetical protein BACPLE_03738 [Bacteroides plebeius DSM 17135]
          Length = 253

 Score = 42.1 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 10/51 (19%), Positives = 21/51 (41%), Gaps = 1/51 (1%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           +    + L   +  AG   S  EA   + +  + +N  I++    ++K  D
Sbjct: 13  DPDEPIRLNKFLANAGIC-SRREADEFITAGVVSVNGEIVTELGTKVKRSD 62


>gi|134076525|emb|CAK39720.1| unnamed protein product [Aspergillus niger]
          Length = 436

 Score = 42.1 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 22/115 (19%), Positives = 41/115 (35%), Gaps = 19/115 (16%)

Query: 299 KKIIATEITTMVHGREEAEK-----------------AATAAMECFDMSIHSQHMPTISI 341
           +K  A  I    HG + +EK                  A  A +  D     +  P    
Sbjct: 42  QKWDAKSIARGYHGEQVSEKHWVRMFSPRIRSVVPMDPAKLAKDDADADQLERPFPYTQA 101

Query: 342 SKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
           +   + R + +   + +A FA+ST +AR+ +   A+ +N   +      +   D 
Sbjct: 102 TFAPLERRLDVA--VFRAMFASSTRQARQFVIHGAVTVNGKKMRYPGYLLNPGDL 154


>gi|119470438|ref|ZP_01613166.1| tryptophanyl-tRNA synthetase [Alteromonadales bacterium TW-7]
 gi|119446363|gb|EAW27639.1| tryptophanyl-tRNA synthetase [Alteromonadales bacterium TW-7]
          Length = 334

 Score = 42.1 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 39/198 (19%), Positives = 66/198 (33%), Gaps = 33/198 (16%)

Query: 140 LLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGG 199
           +L        +NRM  F+   S+     ++    F+Y +LQA D + L +     +   G
Sbjct: 94  VLNCYAQMGELNRMTQFKDKSSKHANNVNVGL--FSYPVLQAADIL-LYQADQVPV---G 147

Query: 200 SDQWGNIICGIDLGERLKT--PKLFALTSPLLTTASG---------TKMGKTL---SGAI 245
            DQ  ++    D+  R       +F L  P +               KM K+    +G I
Sbjct: 148 EDQKQHLELTRDIATRFNNLYGDVFKLPEPYIPEFGARVMSLQDPLKKMSKSDENPNGYI 207

Query: 246 WLNKEMTSPYNFWQYWRNIDDADVVSFAK---------RLTTLPMSEIDRMAKL----QG 292
            L  E        +      D     +            LT L ++    +  L    +G
Sbjct: 208 MLLDEPKKIEKKLKKAVTDSDEQARIYFDRTEKPGVSNLLTLLSVATKRSIEDLVPEFEG 267

Query: 293 KEINEAKKIIATEITTMV 310
           K     KK  A  + +M+
Sbjct: 268 KMYGHLKKDTADAVVSMI 285


>gi|120612354|ref|YP_972032.1| tryptophanyl-tRNA synthetase [Acidovorax citrulli AAC00-1]
 gi|120590818|gb|ABM34258.1| tryptophanyl-tRNA synthetase [Acidovorax citrulli AAC00-1]
          Length = 435

 Score = 42.1 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 30/209 (14%), Positives = 57/209 (27%), Gaps = 23/209 (11%)

Query: 50  HAGHLTQLML--LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIK 107
           H G+    +   +   Q+ G +    +    ++I         R     +     +    
Sbjct: 17  HLGNFVGSIRPSVAASQRPGVQSFYFLANYHALIKCEDPARIQRS--TVEIAASWLAAGL 74

Query: 108 GIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ 167
                     +   +   LN   WL  +  +     +    +            R + + 
Sbjct: 75  DPEHVTFYRQSDIPEIPELN---WL--LSCVTGKGLLNRAHAYKASQDKNEAAGR-ELDD 128

Query: 168 SLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSP 227
            ++   F Y +L A D +   K +   +   G DQ  +I    D+              P
Sbjct: 129 GVTAGLFMYPVLMAADILA-FKAHKVPV---GRDQVQHIEMARDIASSFNHLYGEHFVLP 184

Query: 228 ---------LLTTASGTKMGKTLSGAIWL 247
                     L    G KM K+    I L
Sbjct: 185 EAAIDEHVATLPGLDGRKMSKSYDNTIPL 213


>gi|282878147|ref|ZP_06286944.1| pseudouridylate synthase [Prevotella buccalis ATCC 35310]
 gi|281299725|gb|EFA92097.1| pseudouridylate synthase [Prevotella buccalis ATCC 35310]
          Length = 488

 Score = 42.1 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 12/67 (17%), Positives = 30/67 (44%), Gaps = 1/67 (1%)

Query: 349 GMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGK 408
            + L   +  AG   S  EA   +++  +K+N  +++    ++   D     +  +S  K
Sbjct: 252 PVRLNKFLANAGVC-SRREADEFIQAGVVKVNGEVVTELGTKVMRTDEVVFHDQPVSLEK 310

Query: 409 KNHIICH 415
           K +++ +
Sbjct: 311 KVYVLLN 317


>gi|163736830|ref|ZP_02144248.1| lysyl-tRNA synthetase [Phaeobacter gallaeciensis BS107]
 gi|161389434|gb|EDQ13785.1| lysyl-tRNA synthetase [Phaeobacter gallaeciensis BS107]
          Length = 547

 Score = 42.1 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 18/85 (21%), Positives = 27/85 (31%), Gaps = 6/85 (7%)

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            DF           +M G D   N      +   L        T  L   A+G K+ KT 
Sbjct: 236 PDFGARWAALGVDFEMYGKDHSTNTPIYDGICRVLGHRPPEHFTYELFLDANGQKISKTS 295

Query: 242 SGAIWLNKEMT------SPYNFWQY 260
              I +++ +T        Y  +Q 
Sbjct: 296 GNGISIDEWLTYASTESLAYFMYQK 320


>gi|126731194|ref|ZP_01747002.1| lysyl-tRNA synthetase [Sagittula stellata E-37]
 gi|126708496|gb|EBA07554.1| lysyl-tRNA synthetase [Sagittula stellata E-37]
          Length = 526

 Score = 42.1 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 31/182 (17%), Positives = 49/182 (26%), Gaps = 33/182 (18%)

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            DF           +M G D   N      +   L        T  L    +G K+ K+ 
Sbjct: 236 PDFGARWAALGVDFEMYGKDHSTNTPIYDGICRALGAKAPEHFTYELFLDENGQKISKSS 295

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKI 301
              I ++                         + LT      +      + K        
Sbjct: 296 GNGISID-------------------------EWLTYASTESLSYFMFQKPKTAKRMHFD 330

Query: 302 IATEITTMVHGREEAEKAATAAMECFDM---SIHSQHMPTISISKDEVSRGMGLLTLIVK 358
           +  +     H +  A +   AA   F+     IH   +P  ++    V   M LL L   
Sbjct: 331 VIPKAVDEYHQQLRAYRGQDAA-ARFNNPVWHIHGGEVPESTLV---VPFSM-LLNLASA 385

Query: 359 AG 360
           AG
Sbjct: 386 AG 387


>gi|325953990|ref|YP_004237650.1| tryptophanyl-tRNA synthetase [Weeksella virosa DSM 16922]
 gi|323436608|gb|ADX67072.1| tryptophanyl-tRNA synthetase [Weeksella virosa DSM 16922]
          Length = 323

 Score = 42.1 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 33/179 (18%), Positives = 59/179 (32%), Gaps = 24/179 (13%)

Query: 144 IGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQW 203
           + +FF   R+    S + +      ++   F Y IL A D +     YD  L   G DQ 
Sbjct: 95  LLNFFPYQRLTLAHSFKDKQDYLADVNAGLFTYPILMAADILL----YDANLVPVGKDQL 150

Query: 204 GNIICGIDLGERLKTPKLFALTSP---------LLTTASGTKMGKTLSG--AIWLNKEMT 252
            ++    D+  R           P         ++    G KM K+ +    I+L+ +  
Sbjct: 151 QHLEITRDVASRFNHQMGETFVLPEAKISEDAMIVPGTDGFKMSKSRNNFINIFLSDKEL 210

Query: 253 SPYNFWQYWRNIDDAD--------VVSFAKRLT-TLPMSEIDRMAKLQGKEINEAKKII 302
                     +    D        V +  K L     ++E+    +  G     AK+ +
Sbjct: 211 RKQVMAIQTDSTPLEDPKNPDTDNVFAIYKLLANEQQLAEMRENYQKGGYGYGHAKQAL 269


>gi|318058751|ref|ZP_07977474.1| tryptophanyl-tRNA synthetase [Streptomyces sp. SA3_actG]
          Length = 330

 Score = 42.1 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 49/296 (16%), Positives = 92/296 (31%), Gaps = 45/296 (15%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   +A S H G+    +  +   +  H     +    + I  P   D  R   R    Q
Sbjct: 4   GIQPSAGSFHLGNYLGAVRQWVALQESHDAFYTVVDMHA-ITVPQDPDTLRANTRLSAAQ 62

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLS-FESV 159
                I    S+       +  A +     W        ++  +  F   +RM    +  
Sbjct: 63  LLAAGIDPERSALFVQSHVREHAELA----W--------IMNCLTGFGEASRMTQFKDKA 110

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT- 218
             +     ++    F Y +LQ  D + L + +   +   G DQ  ++    DL ER    
Sbjct: 111 AKQGAEGTTVGL--FTYPVLQVADIL-LYQAHQVPV---GEDQRQHVELTRDLAERFNAR 164

Query: 219 -------PKLFAL--TSPLLTTAS-GTKMGKTLSGAIWLNKEMTSPYNFWQYWRN-IDDA 267
                  P+ + L  T+ +        KM K+ +    L   M  P    +  ++ + D 
Sbjct: 165 YGETFVVPEAYILKETAKIYDLQEPSAKMSKSAASPKGLVNLMDEPKATARKIKSAVTDT 224

Query: 268 D------------VVSFAKRLTTLPMSEIDRMAKL-QGKEINEAKKIIATEITTMV 310
           +            V +     + L    +  + +   GK     K  +A  +   V
Sbjct: 225 ETEIRFDRENKPGVSNLLGIYSNLTGVTVQALEEKYAGKGYGALKTDLAEVVVDFV 280


>gi|293392659|ref|ZP_06636978.1| tryptophan-tRNA ligase [Serratia odorifera DSM 4582]
 gi|291424776|gb|EFE97986.1| tryptophan-tRNA ligase [Serratia odorifera DSM 4582]
          Length = 340

 Score = 42.1 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 34/217 (15%), Positives = 65/217 (29%), Gaps = 29/217 (13%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMR-SQEIQEN 102
            T   LH GH    +      +  ++   L+     +       D      +    I E 
Sbjct: 19  PTGP-LHLGHFVGSLRQRVALQRDYQQFVLIADLQGL------TDNGSNPQKIRDNIPEV 71

Query: 103 IEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR 162
           +                 T   + +    L  +  + +     +    N  +  E ++  
Sbjct: 72  LADYLAAG-----IDPSLTTLCLQSALPALAELTALYMNIVTVARVERNPTVKNEIIQKG 126

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT---- 218
             R   + FL   Y I QA D      +   R+ +G  DQ   I    ++  ++ +    
Sbjct: 127 FARSLPVGFL--VYPISQAADITAFKAD---RVPVG-DDQLPMIEQTNEIVHKMNSLFPE 180

Query: 219 ------PKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
                   + + TS L       KM K+L   + L+ 
Sbjct: 181 PVLRHCKAMLSETSRLPGIDGNAKMSKSLGNTLLLSA 217


>gi|326318417|ref|YP_004236089.1| tryptophanyl-tRNA synthetase [Acidovorax avenae subsp. avenae ATCC
           19860]
 gi|323375253|gb|ADX47522.1| tryptophanyl-tRNA synthetase [Acidovorax avenae subsp. avenae ATCC
           19860]
          Length = 435

 Score = 42.1 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 30/209 (14%), Positives = 57/209 (27%), Gaps = 23/209 (11%)

Query: 50  HAGHLTQLML--LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIK 107
           H G+    +   +   Q+ G +    +    ++I         R     +     +    
Sbjct: 17  HLGNFVGSIRPSVAASQRPGVQSFYFLANYHALIKCEDPARIQRS--TVEIAASWLAAGL 74

Query: 108 GIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ 167
                     +   +   LN   WL  +  +     +    +            R + + 
Sbjct: 75  DPEHVTFYRQSDIPEIPELN---WL--LSCVTGKGLLNRAHAYKASQDKNEAAGR-ELDD 128

Query: 168 SLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSP 227
            ++   F Y +L A D +   K +   +   G DQ  +I    D+              P
Sbjct: 129 GVTAGLFMYPVLMAADILA-FKAHKVPV---GRDQVQHIEMARDIASSFNHLYGEHFVLP 184

Query: 228 ---------LLTTASGTKMGKTLSGAIWL 247
                     L    G KM K+    I L
Sbjct: 185 EAAIDEHVATLPGLDGRKMSKSYDNTIPL 213


>gi|147921289|ref|YP_684897.1| putative ribosomal RNA methyltransferase [uncultured methanogenic
           archaeon RC-I]
 gi|110620293|emb|CAJ35571.1| putative ribosomal RNA methyltransferase [uncultured methanogenic
           archaeon RC-I]
          Length = 216

 Score = 42.1 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 12/57 (21%), Positives = 23/57 (40%), Gaps = 7/57 (12%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS-------TGNIKLS 405
           +V  G   S + A+R++    +K+N  +++    Q+K              G  KL 
Sbjct: 7   LVSEGLIASRSRAKRYIHRGLVKLNGEVVTKPSKQVKPGAIIEIAEEDRPEGYFKLK 63


>gi|296284815|ref|ZP_06862813.1| S4 domain-containing protein [Citromicrobium bathyomarinum JL354]
          Length = 100

 Score = 42.1 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 8/46 (17%), Positives = 22/46 (47%), Gaps = 4/46 (8%)

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQDFD----STGNIKLSF 406
            + ARR ++S  +++N + +     +I + D      ++G + +  
Sbjct: 16  RSAARRLVESGHLRVNGTRVERVSREITVGDVLTIPRTSGVLVIRI 61


>gi|238024119|ref|YP_002908351.1| Tryptophanyl-tRNA synthetase [Burkholderia glumae BGR1]
 gi|237878784|gb|ACR31116.1| Tryptophanyl-tRNA synthetase [Burkholderia glumae BGR1]
          Length = 340

 Score = 42.1 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 41/237 (17%), Positives = 68/237 (28%), Gaps = 46/237 (19%)

Query: 45  TASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIE 104
           T   LH GH    +      +  +    L+    ++       +  R    +  + E   
Sbjct: 17  TGP-LHLGHYVGSLKTRIALQESNTQFILLADLQALTD-----NAERYKRVTDNVIEVAL 70

Query: 105 KIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-L 163
               +          K+   + +    L  I  +  L  +            E +R R  
Sbjct: 71  DYLAVG-----IDPEKSTIFVQSQVPELTEIANL-FLNFVTVSRLERNPTIKEEIRLRGF 124

Query: 164 KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFA 223
           +R+    FL   Y + QA D       +   L   G DQ   I    +L  R+       
Sbjct: 125 ERDIPAGFL--TYPVSQAADITA----FKATLVPVGDDQLPMIEQTNELVRRIN-----G 173

Query: 224 LTSPL-----------------LTTASGT-KMGKTLSGAIWLNKE----MTSPYNFW 258
           L  PL                 L    G  KM K+L+ A+ L        T+    +
Sbjct: 174 LLGPLDRPVLTECEALIPKTGRLPGIDGKAKMSKSLNNALNLGASAADIKTAVKKMY 230


>gi|296126235|ref|YP_003633487.1| RNA-binding S4 domain protein [Brachyspira murdochii DSM 12563]
 gi|296018051|gb|ADG71288.1| RNA-binding S4 domain protein [Brachyspira murdochii DSM 12563]
          Length = 381

 Score = 42.1 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 16/75 (21%), Positives = 37/75 (49%), Gaps = 1/75 (1%)

Query: 341 ISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG 400
           + K +    + L+ +I+++GFA S     + + S  I++NN +I +   ++K  D  S  
Sbjct: 1   MKKQKNEEAVRLVKVILESGFA-SRRNCEKAIMSGRIRVNNEVILDPAYRVKESDSVSID 59

Query: 401 NIKLSFGKKNHIICH 415
              +   +K ++  +
Sbjct: 60  RKLIERQRKRYMALY 74


>gi|223038553|ref|ZP_03608847.1| RNA pseudouridine synthase family protein [Campylobacter rectus
           RM3267]
 gi|222880410|gb|EEF15497.1| RNA pseudouridine synthase family protein [Campylobacter rectus
           RM3267]
          Length = 257

 Score = 42.1 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 10/51 (19%), Positives = 18/51 (35%), Gaps = 1/51 (1%)

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           S  EA   +K   + IN  ++S     +  +D        +   KK   + 
Sbjct: 17  SRREADELIKQGKVSINGRVVSELATSVSDEDKVKINGRIVRL-KKEFTVI 66


>gi|50748700|ref|XP_421368.1| PREDICTED: hypothetical protein [Gallus gallus]
          Length = 473

 Score = 42.1 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 16/87 (18%), Positives = 31/87 (35%), Gaps = 10/87 (11%)

Query: 15  RGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI-- 71
           RG      +  + L    ++     Y G   ++ ++H GHL   +   WLQ+    P+  
Sbjct: 137 RGIFFSHRDMDQILHAYENKKPFYLYTGRGPSSQAMHVGHLIPFLFTKWLQEAFDVPLVI 196

Query: 72  -------SLMGGGTSIIGDPSFRDESR 91
                   L    T+       ++ +R
Sbjct: 197 QLTDDEKYLWKDMTTEKAYEYAKENAR 223


>gi|302380459|ref|ZP_07268927.1| tryptophan--tRNA ligase [Finegoldia magna ACS-171-V-Col3]
 gi|302311770|gb|EFK93783.1| tryptophan--tRNA ligase [Finegoldia magna ACS-171-V-Col3]
          Length = 360

 Score = 42.1 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 57/361 (15%), Positives = 109/361 (30%), Gaps = 63/361 (17%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGH--KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +     +Q  G   K   ++    ++  + +  D+ R     + I 
Sbjct: 11  PTGK-LHLGHYVGSLKNRVIMQNKGDFDKMYVMIADAQALTDNFNNPDKVR-----ENII 64

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           E                  K    + ++   L  + +  +     S    N  +  E  +
Sbjct: 65  EVALDYLSCG-----IDPNKVTIFVQSHVEQLTELMFYYMNLVTLSRLERNPTVKAEIKQ 119

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT-- 218
                   + FL   Y I QA D       ++  +   G DQ   +    ++        
Sbjct: 120 KEFGASLPVGFL--TYPISQAADITL----FNANIVPVGEDQLPMLEQTREIVRTFNNYY 173

Query: 219 ------PKLFALTSPL---LTTASGT-KMGKTLSGAIWL-NKEMTSPYNFWQYW-----R 262
                 PK     + +   L    G  KM K+L   I+L + E          +      
Sbjct: 174 SEVLVEPKAVIPDNKICSRLPGLDGKAKMSKSLGNCIYLSDSEKDVKSKVMSMFTDPNHI 233

Query: 263 NIDD------ADVVSFAKRL-------TTLP----MSEIDRMAKLQGKEINEAKK----I 301
            I D        V ++             LP    + E+    +  G    + KK    I
Sbjct: 234 QISDPGKVEGNTVFTYLDAFCVDDDFSEFLPEYKNLDELKDHYRRGGLGDVKIKKFLNNI 293

Query: 302 IATEITTMVHGREEAEK-AATAAMECFDMSIHSQHMPTISISKDEVSRGMGL---LTLIV 357
           +  E++ +   R+  E+            S  ++ +   ++ K + + G+     + LI 
Sbjct: 294 LQKELSPIREKRKHYEQNIPEIFDMLLKGSEDARKVGAETLKKVKAAMGINYFEDVDLIT 353

Query: 358 K 358
           K
Sbjct: 354 K 354


>gi|241202792|ref|YP_002973888.1| tryptophanyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM1325]
 gi|240856682|gb|ACS54349.1| tryptophanyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM1325]
          Length = 354

 Score = 42.1 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 59/377 (15%), Positives = 118/377 (31%), Gaps = 94/377 (24%)

Query: 31  CSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDES 90
            S+     + G   T + LH G+    +  F   + G+  I  +    +           
Sbjct: 1   MSEFKKLVFSGVQPTGN-LHLGNYLGAIRRFVALQEGNDCIYCVVDMHA----------- 48

Query: 91  RRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFS- 149
              + +Q + E++       ++         +  ++ N++ +     +  +    +    
Sbjct: 49  ---LTAQLVHEDMPSQTRSIAAAFIAAGIDPEKHIVFNQSAVPQHAELAWIFNCVARIGW 105

Query: 150 VNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICG 209
           +NRM  F+    + + + SL    + Y  L A D + + +     +   G DQ  ++   
Sbjct: 106 MNRMTQFKDKAGKDREQASLGL--YAYPSLMAADIL-VYRATHVPV---GEDQKQHLELA 159

Query: 210 IDLG-------------------ERLKTPKLFA---LTSPLLTTA--------SGT-KMG 238
            D+                      +    + A   +  PL+            GT KM 
Sbjct: 160 RDIAMKFNLDYAEHISRTGYGVDITVGNEPVHAYFPMVEPLIGGPAPRVMSLRDGTKKMS 219

Query: 239 KTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEA 298
           K+             P +       +DD D +S                     K+I +A
Sbjct: 220 KS------------DPSDL-SRINLMDDEDAIS---------------------KKIRKA 245

Query: 299 KKI---IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTL 355
           K     + +EI  +  GR EA+          D S  +  +      +  V +   L+ L
Sbjct: 246 KTDPDGLPSEIDGL-QGRPEADNLVAIYAALADKS-KADVLAEFGGQQFSVFKPA-LVDL 302

Query: 356 IVKAGFATSTNEARRHL 372
            +    A  T E RR +
Sbjct: 303 AINV-LAPITGEMRRLM 318


>gi|16763315|ref|NP_458932.1| tryptophanyl-tRNA synthetase II [Salmonella enterica subsp.
           enterica serovar Typhi str. CT18]
 gi|29144793|ref|NP_808135.1| tryptophanyl-tRNA synthetase II [Salmonella enterica subsp.
           enterica serovar Typhi str. Ty2]
 gi|213162282|ref|ZP_03347992.1| tryptophanyl-tRNA synthetase II [Salmonella enterica subsp.
           enterica serovar Typhi str. E00-7866]
 gi|213428373|ref|ZP_03361123.1| tryptophanyl-tRNA synthetase II [Salmonella enterica subsp.
           enterica serovar Typhi str. E02-1180]
 gi|213619384|ref|ZP_03373210.1| tryptophanyl-tRNA synthetase II [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-2068]
 gi|213648411|ref|ZP_03378464.1| tryptophanyl-tRNA synthetase II [Salmonella enterica subsp.
           enterica serovar Typhi str. J185]
 gi|25292926|pir||AI1066 tryptophan-tRNA ligase (EC 6.1.1.2) - Salmonella enterica subsp.
           enterica serovar Typhi (strain CT18)
 gi|16505624|emb|CAD03352.1| probable tryptophanyl-tRNA synthetase [Salmonella enterica subsp.
           enterica serovar Typhi]
 gi|29140432|gb|AAO71995.1| probable tryptophanyl-tRNA synthetase [Salmonella enterica subsp.
           enterica serovar Typhi str. Ty2]
          Length = 337

 Score = 42.1 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 35/217 (16%), Positives = 63/217 (29%), Gaps = 29/217 (13%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMR-SQEIQEN 102
            T  SLH GH    +      +  H+   L+     +       D      +    I + 
Sbjct: 13  PTG-SLHLGHYVGSLRQRVALQQDHQQYVLIADLQGL------TDNGSNPQKIRDNIPQV 65

Query: 103 IEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR 162
           +     +           T   + +    L  +  + +     +    N  +  E  +  
Sbjct: 66  LADYLAVG-----IDPALTTICLQSALPALAELTVLYMNIVTVARVERNPTVKNEIAQKG 120

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT---- 218
             R   + F    Y I QA D       +   +   G DQ   I    ++  ++ +    
Sbjct: 121 FTRSLPVGF--MAYPISQAADITA----FKAEMVPVGDDQLPMIEQTNEIVHKMNSLFSS 174

Query: 219 ---PKLFALTSPL--LTTASG-TKMGKTLSGAIWLNK 249
                  AL S    L    G  KM K+L   + L+ 
Sbjct: 175 PVLRPCQALLSDTGRLPGIDGSAKMSKSLVNTLLLSA 211


>gi|296115125|ref|ZP_06833766.1| lysyl-tRNA synthetase [Gluconacetobacter hansenii ATCC 23769]
 gi|295978226|gb|EFG84963.1| lysyl-tRNA synthetase [Gluconacetobacter hansenii ATCC 23769]
          Length = 538

 Score = 42.1 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 18/87 (20%), Positives = 27/87 (31%), Gaps = 6/87 (6%)

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           D+           +M G D   ++     +   L       LT  L    +G K+ K+  
Sbjct: 240 DWAMRWYALGVDYEMSGKDLIDSVRLSGRICRILGGRAPAGLTYELFLDENGQKISKSKG 299

Query: 243 GAI----WLNKEMTSPYNFWQYWRNID 265
             I    WL      P +  QY  N  
Sbjct: 300 NGISVEEWL--RYAPPESLGQYMFNAP 324


>gi|152974996|ref|YP_001374513.1| pseudouridine synthase [Bacillus cereus subsp. cytotoxis NVH
           391-98]
 gi|152023748|gb|ABS21518.1| pseudouridine synthase [Bacillus cytotoxicus NVH 391-98]
          Length = 242

 Score = 42.1 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 26/53 (49%), Gaps = 1/53 (1%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           L  +I +AG A S  +A   ++   +K+N  I++    ++  QD     +I L
Sbjct: 4   LQKVIAQAGIA-SRRKAEELIQQGKVKVNGKIVTELGTKVTPQDKVEVNHIPL 55


>gi|326921026|ref|XP_003206765.1| PREDICTED: tryptophanyl-tRNA synthetase, cytoplasmic-like
           [Meleagris gallopavo]
          Length = 473

 Score = 42.1 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 16/87 (18%), Positives = 31/87 (35%), Gaps = 10/87 (11%)

Query: 15  RGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI-- 71
           RG      +  + L    ++     Y G   ++ ++H GHL   +   WLQ+    P+  
Sbjct: 137 RGIFFSHRDMDQILHAYENKKPFYLYTGRGPSSQAMHVGHLIPFLFTKWLQEAFDVPLVI 196

Query: 72  -------SLMGGGTSIIGDPSFRDESR 91
                   L    T+       ++ +R
Sbjct: 197 QLTDDEKYLWKDMTTEKAYEYAKENAR 223


>gi|289581366|ref|YP_003479832.1| tryptophan--tRNA ligase [Natrialba magadii ATCC 43099]
 gi|289530919|gb|ADD05270.1| Tryptophan--tRNA ligase [Natrialba magadii ATCC 43099]
          Length = 570

 Score = 42.1 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 38/211 (18%), Positives = 67/211 (31%), Gaps = 32/211 (15%)

Query: 12  LSERGFIHQISNPREL-DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           L  RG I    + R + + L +        G+  T    H GH      + W Q+ G   
Sbjct: 89  LMRRGVIFGQRDYRPVVEALQNDEPAAVLSGFMPTGDP-HIGHKLVFDEIIWHQQQGADA 147

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
            +L+    +          S R M  +EI E+         +   +   + D    +   
Sbjct: 148 YALIADLEA---------NSARGMSWEEIDEHARSYLLSLLALG-FDPEEGDLYRQS--- 194

Query: 131 WLCSIKYIDLLREIG-----SFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
              + +  DL  ++G     S F        E+  S ++        +  Y  L+     
Sbjct: 195 --TNREVQDLAFDLGAEANFSEFQAIYGFDGETDVSHMQSVV-TQMADILYPQLEEPKPT 251

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERL 216
            +           G DQ  ++    DL ER+
Sbjct: 252 VI---------PVGPDQDPHVRLARDLAERM 273


>gi|170288482|ref|YP_001738720.1| pseudouridine synthase [Thermotoga sp. RQ2]
 gi|170175985|gb|ACB09037.1| pseudouridine synthase [Thermotoga sp. RQ2]
          Length = 239

 Score = 42.1 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 9/58 (15%), Positives = 25/58 (43%), Gaps = 1/58 (1%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
           +  +G   +  E ++ +K   + +N  ++ +    +   D  +     + F KK +I+
Sbjct: 7   LSNSG-VGTRKEVKKLIKQGRVTVNGRVVLDPGHPVLENDAVALDGEVVRFHKKVYIL 63


>gi|148260478|ref|YP_001234605.1| RNA-binding S4 domain-containing protein [Acidiphilium cryptum
           JF-5]
 gi|326403671|ref|YP_004283753.1| ribosomal large subunit pseudouridine synthase B [Acidiphilium
           multivorum AIU301]
 gi|146402159|gb|ABQ30686.1| RNA-binding S4 domain protein [Acidiphilium cryptum JF-5]
 gi|325050533|dbj|BAJ80871.1| ribosomal large subunit pseudouridine synthase B [Acidiphilium
           multivorum AIU301]
          Length = 247

 Score = 42.1 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 10/51 (19%), Positives = 22/51 (43%), Gaps = 1/51 (1%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
            RG  +   + +AG   S  +A R ++S  + +N + + +    +   D  
Sbjct: 8   ERGERIAKYLARAG-VASRRDAERMIESGRVALNGTKVLHPATFVAAGDII 57


>gi|86139255|ref|ZP_01057825.1| lysyl-tRNA synthetase [Roseobacter sp. MED193]
 gi|85824099|gb|EAQ44304.1| lysyl-tRNA synthetase [Roseobacter sp. MED193]
          Length = 544

 Score = 42.1 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 18/85 (21%), Positives = 27/85 (31%), Gaps = 6/85 (7%)

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            DF           +M G D   N      +   L        T  L   A+G K+ KT 
Sbjct: 236 PDFGARWAALGVDFEMYGKDHSTNTPIYDGICRVLGQRAPEHFTYELFLDANGQKISKTS 295

Query: 242 SGAIWLNKEMT------SPYNFWQY 260
              I +++ +T        Y  +Q 
Sbjct: 296 GNGISIDEWLTYASAESLSYFMYQK 320


>gi|332138049|pdb|2KTL|A Chain A, Structure Of C-Terminal Domain From Mttyrrs Of A. Nidulans
          Length = 164

 Score = 42.1 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 14/104 (13%), Positives = 30/104 (28%), Gaps = 22/104 (21%)

Query: 335 HMPT--ISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKIN---NSI------ 383
           +MP+  +++ K  V        ++  AG   S +E +R + +N   +             
Sbjct: 34  NMPSARVTLPKSLVYD-KTFSKVLWSAGLVASKSEGQRIINNNGAYVGSRPGVKKNEPGG 92

Query: 384 ----------ISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
                     I         +       + L  GK    +  + 
Sbjct: 93  GMPDDLTFTPIKTWNASKTQEFIIDGDLLILKLGKWKMKLVSIV 136


>gi|325275041|ref|ZP_08141031.1| tryptophanyl-tRNA synthetase [Pseudomonas sp. TJI-51]
 gi|324099833|gb|EGB97689.1| tryptophanyl-tRNA synthetase [Pseudomonas sp. TJI-51]
          Length = 449

 Score = 42.1 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 43/282 (15%), Positives = 81/282 (28%), Gaps = 46/282 (16%)

Query: 50  HAGHLTQLM--LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIK 107
           H G+    +   +   Q+ G      +    ++I         R  +  +     +    
Sbjct: 16  HLGNYAGAIRPAIRASQQPGVDSFYFLADYHALIKCDDPLRIQRSRL--EIAATWLAG-- 71

Query: 108 GIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLS-FESVRSRLKRE 166
                    G                  +   LL  + +   +NR  +   SV   ++  
Sbjct: 72  ---------GLDADKVTFYRQSDIPEIPELTWLLTCVAAKGLLNRAHAYKASVDKNVEAG 122

Query: 167 Q----SLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL-----K 217
           +     ++   F+Y +L A D +    N   ++ +G  DQ  ++    D+G+R      +
Sbjct: 123 EDPDAGVTMGLFSYPVLMAADILMFNAN---KVPVG-RDQIQHVEMARDIGQRFNHLFGQ 178

Query: 218 TPKLFAL-------TSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNID----- 265
               FAL       +   L    G KM K+    I L        +              
Sbjct: 179 GRDFFALPEAVIEESVATLPGLDGRKMSKSYDNTIPLFTSAKDMKDAISRIVTDSRAPGE 238

Query: 266 --DADVVSFAKRL-TTLPMSEID--RMAKLQGKEINEAKKII 302
             D D               +    R   LQG    +AK+ +
Sbjct: 239 AKDPDTSHLFTLYQAFATPEQCAGFRDELLQGLGWGDAKQRL 280


>gi|313896630|ref|ZP_07830179.1| ribosomal RNA large subunit methyltransferase J [Selenomonas sp.
           oral taxon 137 str. F0430]
 gi|312974815|gb|EFR40281.1| ribosomal RNA large subunit methyltransferase J [Selenomonas sp.
           oral taxon 137 str. F0430]
          Length = 268

 Score = 42.1 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 28/63 (44%), Gaps = 10/63 (15%)

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIIS--------NEKLQIKLQDF--DSTGNIKL 404
           L+V  G A S   A+R + +  + ++   +         +  L++  +D    S G IKL
Sbjct: 9   LLVAQGLAPSRERAKRLIMAGQVLVDERRVDKAGTTVDADASLRVTGEDLPYVSRGGIKL 68

Query: 405 SFG 407
           + G
Sbjct: 69  AKG 71


>gi|294668247|ref|ZP_06733352.1| hypothetical protein NEIELOOT_00158 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291309766|gb|EFE51009.1| hypothetical protein NEIELOOT_00158 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 398

 Score = 42.1 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 28/155 (18%), Positives = 44/155 (28%), Gaps = 23/155 (14%)

Query: 166 EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALT 225
           +  +    ++Y IL   D +    N +  +   G DQ  ++    D+  R         T
Sbjct: 177 DHGVEMGLYSYPILMTADILMFNAN-EVPV---GRDQIQHVEMARDIAGRFNHRFKEVFT 232

Query: 226 SP---------LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWR---------NIDDA 267
            P         LL    G KM K+    I L +                         D 
Sbjct: 233 LPEVKIDENVELLVGLDGRKMSKSYGNTIPLWENDKKTQKSVNKIITNMKEPGEPKQPDE 292

Query: 268 D-VVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKI 301
             +    K  +T   +        +G    EAKK 
Sbjct: 293 SPLFEIYKAFSTPSETAAFTQMLAEGLAWGEAKKT 327


>gi|163743664|ref|ZP_02151039.1| lysyl-tRNA synthetase [Phaeobacter gallaeciensis 2.10]
 gi|161383031|gb|EDQ07425.1| lysyl-tRNA synthetase [Phaeobacter gallaeciensis 2.10]
          Length = 551

 Score = 42.1 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 18/85 (21%), Positives = 27/85 (31%), Gaps = 6/85 (7%)

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            DF           +M G D   N      +   L        T  L   A+G K+ KT 
Sbjct: 240 PDFGARWAALGVDFEMYGKDHSTNTPIYDGICRVLGHRPPEHFTYELFLDANGQKISKTS 299

Query: 242 SGAIWLNKEMT------SPYNFWQY 260
              I +++ +T        Y  +Q 
Sbjct: 300 GNGISIDEWLTYASTESLAYFMYQK 324


>gi|331268706|ref|YP_004395198.1| tryptophan--tRNA ligase [Clostridium botulinum BKT015925]
 gi|329125256|gb|AEB75201.1| tryptophan--tRNA ligase [Clostridium botulinum BKT015925]
          Length = 334

 Score = 42.1 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 50/304 (16%), Positives = 94/304 (30%), Gaps = 50/304 (16%)

Query: 32  SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG-HKPISLMGGGTSIIGDPSFRDES 90
           ++     + G   +   L  G+    +   W++    ++    +    +I      +D  
Sbjct: 4   TEQKKVIFSGIQPSGD-LTLGNYLGALK-NWVKLQDQYECYYCIVDMHAITVKQQPKDLR 61

Query: 91  RRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSV 150
           RR +    I           + FI+              TW+  +     + E+      
Sbjct: 62  RRTLELLSIYVAAGIDPEKNTIFIQSHVPAHAE-----ATWI--LNCNSYMGEL------ 108

Query: 151 NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGI 210
           +RM  ++    +      +    F Y +L A D +     Y   L   G DQ  ++    
Sbjct: 109 SRMTQYKDKSQKYGNNIGVGL--FTYPVLMAADILL----YQTDLVPVGKDQKQHLELTR 162

Query: 211 DLGERLKTP--KLFALTSPLLTTASGT---------KMGKTLSGAIWLNKEMTSPYNFWQ 259
           D+ ER        F +  P +  A            KM K+          M  P    +
Sbjct: 163 DIAERFNGAYSPTFKVPEPYIPEAGAKIMDLQEPSKKMSKSSDNPNSFILIMDPPEVIRK 222

Query: 260 YW-RNIDDAD-VVSF-------AKRLTTL------PMSEIDRMAKLQGKEINEAKKIIAT 304
              R + D+  VV +          +T L         +I++  + QG    + KK +A 
Sbjct: 223 KISRAVTDSLGVVKYSDEQPGVKNLMTILSVIKGKSFEDIEKEYEGQGYA--KFKKDVAE 280

Query: 305 EITT 308
            I  
Sbjct: 281 AIVE 284


>gi|329114342|ref|ZP_08243104.1| Lysyl-tRNA synthetase [Acetobacter pomorum DM001]
 gi|326696418|gb|EGE48097.1| Lysyl-tRNA synthetase [Acetobacter pomorum DM001]
          Length = 541

 Score = 42.1 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 22/129 (17%), Positives = 39/129 (30%), Gaps = 14/129 (10%)

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           D+           +M G D   ++     + + L       LT  L     G K+ K+  
Sbjct: 245 DWAMRWYALGVDYEMSGKDLIDSVRLSGRICKILGGTPPAGLTYELFLDEKGQKISKSKG 304

Query: 243 GAI----WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEA 298
             +    WL      P +  Q+  N          +         I + A      +++A
Sbjct: 305 NGLSVEEWL--RYAPPESLGQFMFNQP----QRAKRLY----FDVIPKTADEYLTHVDKA 354

Query: 299 KKIIATEIT 307
           K + A   T
Sbjct: 355 KVLQAENPT 363


>gi|229817935|ref|ZP_04448217.1| hypothetical protein BIFANG_03222 [Bifidobacterium angulatum DSM
           20098]
 gi|229784539|gb|EEP20653.1| hypothetical protein BIFANG_03222 [Bifidobacterium angulatum DSM
           20098]
          Length = 271

 Score = 42.1 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 16/88 (18%), Positives = 35/88 (39%), Gaps = 11/88 (12%)

Query: 328 DMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNE 387
              I    +   ++  D V+    L  L+V+AG   +  +A++ +K+  + +N   ++  
Sbjct: 2   SEQISGNEIDLEAVGDDIVNMPDRLDLLLVEAGVVGTRTKAQKLIKAGKVTVNGETVTKP 61

Query: 388 KLQIKL-----------QDFDSTGNIKL 404
              +             +D+ S G  KL
Sbjct: 62  AYAVGALGHARIRVDKGEDYVSRGAYKL 89


>gi|221638684|ref|YP_002524946.1| Pseudouridine synthase [Rhodobacter sphaeroides KD131]
 gi|221159465|gb|ACM00445.1| Pseudouridine synthase [Rhodobacter sphaeroides KD131]
          Length = 491

 Score = 42.1 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 12/53 (22%), Positives = 24/53 (45%), Gaps = 1/53 (1%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
           +   G  +  ++ +AG A S  +A R ++   I +N   I +  L +  +D  
Sbjct: 3   DSKDGERIAKVLSRAGIA-SRRDAERMIELGRIAVNGRTIDSPALNVGPKDRI 54


>gi|126461709|ref|YP_001042823.1| RNA-binding S4 domain-containing protein [Rhodobacter sphaeroides
           ATCC 17029]
 gi|126103373|gb|ABN76051.1| RNA-binding S4 domain protein [Rhodobacter sphaeroides ATCC 17029]
          Length = 489

 Score = 42.1 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 12/53 (22%), Positives = 24/53 (45%), Gaps = 1/53 (1%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
           +   G  +  ++ +AG A S  +A R ++   I +N   I +  L +  +D  
Sbjct: 3   DSKDGERIAKVLSRAGIA-SRRDAERMIELGRIAVNGRTIDSPALNVGPKDRI 54


>gi|77462817|ref|YP_352321.1| pseudouridine synthase [Rhodobacter sphaeroides 2.4.1]
 gi|77387235|gb|ABA78420.1| Pseudouridine synthase, (predicted) [Rhodobacter sphaeroides 2.4.1]
          Length = 508

 Score = 42.1 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 12/53 (22%), Positives = 24/53 (45%), Gaps = 1/53 (1%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
           +   G  +  ++ +AG A S  +A R ++   I +N   I +  L +  +D  
Sbjct: 3   DSKDGERIAKVLSRAGIA-SRRDAERMIELGRIAVNGRTIDSPALNVGPKDRI 54


>gi|330877155|gb|EGH11304.1| tryptophanyl-tRNA synthetase [Pseudomonas syringae pv. morsprunorum
           str. M302280PT]
          Length = 449

 Score = 42.1 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 31/193 (16%), Positives = 59/193 (30%), Gaps = 32/193 (16%)

Query: 166 EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-----TPK 220
           +  ++   ++Y +L A D + +   +   +   G DQ  ++    D+G+R         +
Sbjct: 126 DAGITMGLYSYPVLMAADIL-MFNAHQVPV---GRDQIQHVEMARDIGQRFNHLFGKGKE 181

Query: 221 LFAL-------TSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNID-------D 266
            F +       +   L    G KM K+    I L        +                D
Sbjct: 182 FFVMPEALIEESVATLPGLDGRKMSKSYDNTIPLFSSAKDMKSAISRIVTDSLAPGEAKD 241

Query: 267 ADVVSFAKRLTTLPMSE---IDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAA 323
            D              E     R   LQG    EAK  +     T++ G+    +A    
Sbjct: 242 PDNSHLFTLYQAFSTPEQCAEFRSELLQGLGWGEAKTRL----FTLLDGQ--LGEAREQY 295

Query: 324 MECFDMSIHSQHM 336
           +   +     + +
Sbjct: 296 LSLIERPADLEDI 308


>gi|218264461|ref|ZP_03478294.1| hypothetical protein PRABACTJOHN_03990 [Parabacteroides johnsonii
           DSM 18315]
 gi|218221954|gb|EEC94604.1| hypothetical protein PRABACTJOHN_03990 [Parabacteroides johnsonii
           DSM 18315]
          Length = 249

 Score = 42.1 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 10/52 (19%), Positives = 25/52 (48%), Gaps = 1/52 (1%)

Query: 344 DEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
            + +  + L   +  AG   S  EA   +++  +++N+ +++    +I  QD
Sbjct: 8   ADPNEPIRLNKFLSNAGVC-SRREADEFIQAGVVQVNDQVVTELGTKITRQD 58


>gi|302914834|ref|XP_003051228.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256732166|gb|EEU45515.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 455

 Score = 42.1 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 16/61 (26%), Positives = 21/61 (34%), Gaps = 1/61 (1%)

Query: 15  RGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +  + L           Y G   +  SLH GH   L    WLQ+    P+  
Sbjct: 70  RGLFFSHRDFDKILTKYEHGEPFFLYTGRGPSTGSLHLGHTIPLEFTRWLQEVFDVPLVF 129

Query: 74  M 74
           M
Sbjct: 130 M 130


>gi|332557705|ref|ZP_08412027.1| RNA-binding S4 domain-containing protein [Rhodobacter sphaeroides
           WS8N]
 gi|332275417|gb|EGJ20732.1| RNA-binding S4 domain-containing protein [Rhodobacter sphaeroides
           WS8N]
          Length = 385

 Score = 42.1 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 12/53 (22%), Positives = 24/53 (45%), Gaps = 1/53 (1%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
           +   G  +  ++ +AG A S  +A R ++   I +N   I +  L +  +D  
Sbjct: 3   DSKDGERIAKVLSRAGIA-SRRDAERMIELGRIAVNGRTIDSPALNVGPKDRI 54


>gi|323455177|gb|EGB11046.1| hypothetical protein AURANDRAFT_70088 [Aureococcus anophagefferens]
          Length = 417

 Score = 42.1 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 12/53 (22%), Positives = 23/53 (43%), Gaps = 1/53 (1%)

Query: 15  RGFIHQISNPRELDILCSQGV-VTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           RG      +  ++      G  +  Y G   +++++H GHL   ++  WLQ  
Sbjct: 51  RGIFFSHRDLEKILTAAETGQGLYLYTGRGPSSAAMHLGHLVPFLMTRWLQAA 103


>gi|149239614|ref|XP_001525683.1| tryptophanyl-tRNA synthetase [Lodderomyces elongisporus NRRL
           YB-4239]
 gi|146451176|gb|EDK45432.1| tryptophanyl-tRNA synthetase [Lodderomyces elongisporus NRRL
           YB-4239]
          Length = 422

 Score = 42.1 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 15/60 (25%), Positives = 24/60 (40%), Gaps = 1/60 (1%)

Query: 15  RGFIHQISNP-RELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +  R LD+         Y G   ++ S+H GH+   +   WLQ     P+ +
Sbjct: 74  RGVFFSERDLHRILDLYEHGEPFFLYTGRGPSSDSMHLGHMVPFIFTKWLQDVFDVPLVI 133


>gi|303242316|ref|ZP_07328802.1| tryptophanyl-tRNA synthetase [Acetivibrio cellulolyticus CD2]
 gi|302590155|gb|EFL59917.1| tryptophanyl-tRNA synthetase [Acetivibrio cellulolyticus CD2]
          Length = 330

 Score = 42.1 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 22/114 (19%), Positives = 42/114 (36%), Gaps = 15/114 (13%)

Query: 149 SVNRMLSFESVRSRLKR--EQSLSFLEFN-YMILQAYDFVELAKNYDCRLQMGGSDQWGN 205
            ++ +L   + + +L +  +++++   F  Y  LQA D +     Y       G DQ  +
Sbjct: 102 PLSWLLRCPTYKDQLNQLKDKNITTYGFLGYPNLQAADILV----YKAGFVPVGEDQLPH 157

Query: 206 IICGIDLGERLK-------TPKLFALTS-PLLTTASGTKMGKTLSGAIWLNKEM 251
           +    ++  R               LT   +L    G KM K+    I L+   
Sbjct: 158 LELTREIARRFNFFYGEVFPEPQPILTKAKVLPGTDGRKMSKSYGNTIALSDSP 211


>gi|299134222|ref|ZP_07027415.1| RNA-binding S4 domain protein [Afipia sp. 1NLS2]
 gi|298590969|gb|EFI51171.1| RNA-binding S4 domain protein [Afipia sp. 1NLS2]
          Length = 695

 Score = 42.1 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 9/51 (17%), Positives = 22/51 (43%), Gaps = 1/51 (1%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
             G  +   + +AG   S  +A   +    + +N  +I++  L + ++D  
Sbjct: 367 KTGERIAKAVARAGLC-SRRDAEEWITQGRVAVNGRVINSPALDVTVRDVI 416


>gi|170720104|ref|YP_001747792.1| tryptophanyl-tRNA synthetase [Pseudomonas putida W619]
 gi|169758107|gb|ACA71423.1| tryptophanyl-tRNA synthetase [Pseudomonas putida W619]
          Length = 449

 Score = 42.1 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 33/174 (18%), Positives = 56/174 (32%), Gaps = 32/174 (18%)

Query: 156 FESVRSRLKREQ----SLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGID 211
             SV   L+  +     ++   ++Y +L A D + +   +   +   G DQ  ++    D
Sbjct: 112 KASVDKNLENGEDPDAGVTMGLYSYPVLMAADIL-MFNAHKVPV---GRDQIQHVEMARD 167

Query: 212 LGERL-----KTPKLFAL-------TSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQ 259
           +G+R      +    FAL       +   L    G KM K+    I L        +   
Sbjct: 168 IGQRFNHLFGQGKDFFALPEAVIEESVATLPGLDGRKMSKSYDNTIPLFSSAKDMKDAIS 227

Query: 260 YWRNID-------DADVVSFAKRL----TTLPMSEIDRMAKLQGKEINEAKKII 302
                        D D            T +  +E      LQG    EAK+ +
Sbjct: 228 RIVTDSRAPGEAKDPDNAHLFTLFQAFSTPVQCAEFRE-ELLQGLGWGEAKQRL 280


>gi|115390460|ref|XP_001212735.1| tyrosyl-tRNA synthetase [Aspergillus terreus NIH2624]
 gi|114195131|gb|EAU36831.1| tyrosyl-tRNA synthetase [Aspergillus terreus NIH2624]
          Length = 358

 Score = 42.1 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 32/151 (21%), Positives = 56/151 (37%), Gaps = 13/151 (8%)

Query: 95  RSQEIQENIEKIKGIFSSFIK---YGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSV- 150
             + ++   +  + I ++ ++     T K   ++ ++     +   +D+ R         
Sbjct: 57  TIEVVEHRAKYYQFIVTAMLQAVGVSTEKLRFVLGSSYQ-TTTKYCMDMFRLSTLVSEHD 115

Query: 151 NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGI 210
            R  + E V+        LS L   Y ILQ  D   L    D  +Q GG DQ        
Sbjct: 116 ARKSAAEIVKQ--SANAPLSGL--LYPILQVLDEEYL----DVDVQFGGMDQRKLFAAST 167

Query: 211 DLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
           +   +L   K   L +PL+   SG KM  + 
Sbjct: 168 EWHPKLGYRKRAHLLNPLVPGLSGGKMSSSE 198


>gi|104773492|ref|YP_618472.1| tryptophanyl-tRNA synthetase II [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC 11842]
 gi|116513487|ref|YP_812393.1| tryptophanyl-tRNA synthetase II [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC BAA-365]
 gi|300812087|ref|ZP_07092535.1| tryptophan--tRNA ligase [Lactobacillus delbrueckii subsp.
           bulgaricus PB2003/044-T3-4]
 gi|313123055|ref|YP_004033314.1| tryptophanyl-tRNA synthetase ii [Lactobacillus delbrueckii subsp.
           bulgaricus ND02]
 gi|103422573|emb|CAI97176.1| Tryptophanyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC 11842]
 gi|116092802|gb|ABJ57955.1| tryptophanyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC BAA-365]
 gi|300496926|gb|EFK32000.1| tryptophan--tRNA ligase [Lactobacillus delbrueckii subsp.
           bulgaricus PB2003/044-T3-4]
 gi|312279618|gb|ADQ60337.1| Tryptophanyl-tRNA synthetase II [Lactobacillus delbrueckii subsp.
           bulgaricus ND02]
 gi|325125124|gb|ADY84454.1| Trp-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus
           2038]
 gi|325684666|gb|EGD26820.1| tryptophan--tRNA ligase [Lactobacillus delbrueckii subsp. lactis
           DSM 20072]
          Length = 341

 Score = 42.1 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 36/222 (16%), Positives = 66/222 (29%), Gaps = 31/222 (13%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     LQ TG +    ++    ++  +    ++ R  +    +  
Sbjct: 12  PTGK-LHIGHYIGSLKNRVMLQNTGKYDSYIMIADTQALTDNARNPEKIRNSLIEVALDY 70

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
               +         +   +  AL             +  L  +    +V   +  +    
Sbjct: 71  LAVGLDP--EKSTIFVQSQIPALF----ELTTDYMDLVTLSRLERNPTVKTEIKQKGFGD 124

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP-K 220
            L     + FL   Y + QA D       +   L   G DQ   +    ++         
Sbjct: 125 SL----PVGFL--TYPVAQAADITA----FKATLVPVGDDQEPMLEQTREIVRSFNRTYN 174

Query: 221 LFALTSPL----------LTTASGT-KMGKTLSGAIWLNKEM 251
           +  L  P           L    G  KM K+L  AI+L+ + 
Sbjct: 175 VDVLVEPKGYFPPKGQGRLPGLDGNAKMSKSLGNAIYLSDDA 216


>gi|189347951|ref|YP_001944480.1| tryptophanyl-tRNA synthetase [Chlorobium limicola DSM 245]
 gi|189342098|gb|ACD91501.1| tryptophanyl-tRNA synthetase [Chlorobium limicola DSM 245]
          Length = 340

 Score = 42.1 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 55/309 (17%), Positives = 96/309 (31%), Gaps = 52/309 (16%)

Query: 34  GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRM 93
           G +    G   T   LH GH T       L+   H+   L   G S + +  F      +
Sbjct: 2   GTLRILSGMRPTGK-LHLGHYTG-----ALENWVHQQNLLAEDG-SRVYETCFLIADYHI 54

Query: 94  MRSQEIQENIEKIKGIFSSFIKYG----TGKTDALMLNNETWLCSIKYIDLLREIGSFFS 149
           +      E  +  +      + +       +   +   ++    +  ++     I S   
Sbjct: 55  LT--TSLETADAYQHTIDMLMDWLAAGVDPEKSPVFRQSQVKEHAELFLLFAMLITSSRL 112

Query: 150 VNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICG 209
                  E V  R     SL++    Y +LQA D + L K     +   G DQ  ++   
Sbjct: 113 ERNPTLKEQV--RDLNMDSLTYGHLGYPVLQAADIL-LYKGNIVPV---GEDQIPHVEIT 166

Query: 210 IDLGERLKTPKLFALTSPL-------------LTTASGT-KMGKTLSGAIWLNKEMTSPY 255
            ++  +         T  +             L    G  KM K+L   I L+    +P 
Sbjct: 167 REIARKFNFHYPHPETGNVFPEPEPKITKFSRLVGLDGKAKMSKSLGNTILLS---DTPE 223

Query: 256 NFWQYWRN-IDDAD--------------VVSFAKRLTTL-PMSEIDRMAKLQGKEINEAK 299
              +  RN + D                V S+ KR T    +  I+   +       + K
Sbjct: 224 EVLKKVRNAVTDTLKVRRNDPGRPEVCTVFSYHKRFTAQGELDSIETGCRSGALGCVDCK 283

Query: 300 KIIATEITT 308
           K+ A  I+ 
Sbjct: 284 KLCAAAISA 292


>gi|226943429|ref|YP_002798502.1| tryptophanyl-tRNA synthetase [Azotobacter vinelandii DJ]
 gi|226718356|gb|ACO77527.1| tryptophanyl-tRNA synthetase [Azotobacter vinelandii DJ]
          Length = 453

 Score = 42.1 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 25/110 (22%), Positives = 42/110 (38%), Gaps = 24/110 (21%)

Query: 156 FESVRSRLKREQ----SLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGID 211
             +V   L+  +     ++   F+Y +L A D +    N   ++ +G  DQ  ++    D
Sbjct: 112 KAAVDKNLEGGEDPDTGVTMGLFSYPVLMAADILMFNAN---KVPVG-RDQIQHVEMARD 167

Query: 212 LGERLK-----TPKLFALTSP---------LLTTASGTKMGKTLSGAIWL 247
           +G+R         +LF  T P          L    G KM K+    I L
Sbjct: 168 IGQRFNHLFGRGRELF--TLPEAVIEAEVATLPGLDGRKMSKSYDNTIPL 215


>gi|157826856|ref|YP_001495920.1| lysyl-tRNA synthetase [Rickettsia bellii OSU 85-389]
 gi|166229821|sp|A8GVK6|SYK_RICB8 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|157802160|gb|ABV78883.1| lysyl-tRNA synthetase [Rickettsia bellii OSU 85-389]
          Length = 522

 Score = 42.1 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 15/84 (17%), Positives = 26/84 (30%), Gaps = 6/84 (7%)

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            DF           +M G D   N     ++   L       L   L    +G K+ K+ 
Sbjct: 236 PDFSMRWAALKVDYEMYGKDHLANGRLYSEICRILGGKPPVQLCYELFLDENGEKISKSK 295

Query: 242 SGAIWLNK-EMTSPYN-----FWQ 259
             +I ++     +P        +Q
Sbjct: 296 GNSISVDDWLKYAPVESMALFMYQ 319


>gi|220930992|ref|YP_002507900.1| ribosomal protein S4 [Halothermothrix orenii H 168]
 gi|254764592|sp|B8D0T6|RS4_HALOH RecName: Full=30S ribosomal protein S4
 gi|219992302|gb|ACL68905.1| ribosomal protein S4 [Halothermothrix orenii H 168]
          Length = 208

 Score = 42.1 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 42/109 (38%), Gaps = 14/109 (12%)

Query: 292 GKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMG 351
           G ++ E +K+        ++G  E           FDM   ++ MP ++           
Sbjct: 54  GMQLREKQKV------KRIYGILE-----KQFKRYFDM---AEKMPGVTGENFLSILERR 99

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG 400
           L  ++ + G ATS NEAR+ +    I +N   ++     +   D  S  
Sbjct: 100 LDNVVYRLGLATSRNEARQFVLHGHILVNGRKVNIPSYLVDEGDVISVK 148


>gi|323452261|gb|EGB08135.1| hypothetical protein AURANDRAFT_26371 [Aureococcus anophagefferens]
          Length = 359

 Score = 42.1 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 36/228 (15%), Positives = 83/228 (36%), Gaps = 21/228 (9%)

Query: 19  HQISNPRELDILCSQ--GVVTAYIGYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMG 75
            +     EL+ L  +  G    Y G++ +   +H      + M +      G   +  + 
Sbjct: 34  EECQTEAELEKLLEKKAGAFRLYDGFEPSGR-MHIAQGVYKAMNVNKCTAAGGTFVFWVA 92

Query: 76  GGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSI 135
              +++ D    D    + + +++ E + ++       +     +  +  + +       
Sbjct: 93  DWFALMNDKMGGD----LAKIKDVGEYLVEVWRAAGMVMDRVEFRWASDDITSS---ADK 145

Query: 136 KYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRL 195
            +  +L ++   F+V R+    ++  R   E +L+  +  Y ++Q  D   L  +  C+L
Sbjct: 146 YWPQML-DMARRFTVARVKKCCTIMGR--AEGTLTAAQILYPLMQCTDVFFLRADI-CQL 201

Query: 196 QMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLL--TTASGTKMGKT 240
              G DQ    +   D  +      K   L+  +L    A   KM K+
Sbjct: 202 ---GVDQRKVNMLARDYCDAANLKFKPIILSHHMLYGLKAGQAKMSKS 246


>gi|294651197|ref|ZP_06728526.1| tryptophanyl-tRNA synthetase II [Acinetobacter haemolyticus ATCC
           19194]
 gi|292822909|gb|EFF81783.1| tryptophanyl-tRNA synthetase II [Acinetobacter haemolyticus ATCC
           19194]
          Length = 337

 Score = 42.1 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 44/260 (16%), Positives = 71/260 (27%), Gaps = 43/260 (16%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
            T   LH GH    +      +  H    L+    ++  +    D+ R       I +  
Sbjct: 16  PTGQ-LHLGHFVGSLRSRVGLQDSHHQHLLLADAQALTDNADNPDKVRN-----NILQVA 69

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL 163
                +          KT   + +    L  +  I L     +    N  +  E      
Sbjct: 70  LDYLAVG-----IDPTKTTICVQSCLPALNELTMIYLNYVTVARLERNPTVKAEIQLRNF 124

Query: 164 KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFA 223
           +R+    FL   Y I QA D       +   +   G DQ   I    ++  R+       
Sbjct: 125 ERDIPAGFL--CYPIAQAADITA----FKATVVPVGEDQLPMIEQTNEVVRRINRQIGHD 178

Query: 224 LT---------SPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFA 273
           L             L    G  KM K+L   I                 N  D D+    
Sbjct: 179 LLPECKALLSNMARLPGFDGKAKMSKSLGNTI---------------VLNASDKDIKKAV 223

Query: 274 K-RLTTLPMSEIDRMAKLQG 292
               T      I+   +++G
Sbjct: 224 NAMYTDPNHLRIEDPGQVEG 243


>gi|226951550|ref|ZP_03822014.1| tryptophanyl-tRNA synthetase [Acinetobacter sp. ATCC 27244]
 gi|226837692|gb|EEH70075.1| tryptophanyl-tRNA synthetase [Acinetobacter sp. ATCC 27244]
          Length = 337

 Score = 42.1 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 44/260 (16%), Positives = 71/260 (27%), Gaps = 43/260 (16%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
            T   LH GH    +      +  H    L+    ++  +    D+ R       I +  
Sbjct: 16  PTGQ-LHLGHFVGSLRSRVGLQDSHHQHLLLADAQALTDNADNPDKVRN-----NILQVA 69

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL 163
                +          KT   + +    L  +  I L     +    N  +  E      
Sbjct: 70  LDYLAVG-----IDPTKTTICVQSCLPALNELTMIYLNYVTVARLERNPTVKAEIQLRNF 124

Query: 164 KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFA 223
           +R+    FL   Y I QA D       +   +   G DQ   I    ++  R+       
Sbjct: 125 ERDIPAGFL--CYPIAQAADITA----FKATVVPVGEDQLPMIEQTNEVVRRINRQIGHD 178

Query: 224 LT---------SPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFA 273
           L             L    G  KM K+L   I                 N  D D+    
Sbjct: 179 LLPECKALLSNMARLPGFDGKAKMSKSLGNTI---------------VLNASDKDIKKAV 223

Query: 274 K-RLTTLPMSEIDRMAKLQG 292
               T      I+   +++G
Sbjct: 224 NAMYTDPNHLRIEDPGQVEG 243


>gi|218513418|ref|ZP_03510258.1| hemolysin A [Rhizobium etli 8C-3]
          Length = 211

 Score = 42.1 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 8/39 (20%), Positives = 17/39 (43%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
            L+V  G   S + AR  ++   ++I   +++     I 
Sbjct: 24  QLLVSRGLFASRSRARDAVQRGTVRIGGQVVTKAGALIS 62


>gi|209547638|ref|YP_002279555.1| tryptophanyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM2304]
 gi|209533394|gb|ACI53329.1| tryptophanyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM2304]
          Length = 354

 Score = 42.1 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 58/377 (15%), Positives = 120/377 (31%), Gaps = 94/377 (24%)

Query: 31  CSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDES 90
            S+     + G   T + LH G+    +  F   + G+  I  +    +           
Sbjct: 1   MSEFKKLVFSGVQPTGN-LHLGNYLGAIRRFVALQEGNDCIYCVVDMHA----------- 48

Query: 91  RRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFS- 149
              + +Q + E++       ++         +  ++ N++ +     +  +    +    
Sbjct: 49  ---LTAQLVHEDMPSQTRSIAAAFIAAGIDPEKHIVFNQSAVPQHAELAWIFNCVARIGW 105

Query: 150 VNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICG 209
           +NRM  F+    + + + SL    + Y  L A D + + +     +   G DQ  ++   
Sbjct: 106 MNRMTQFKDKAGKDREQASLGL--YAYPSLMAADIL-VYRATHVPV---GEDQKQHLELA 159

Query: 210 IDL-----------GER--------LKTPKLFA---LTSPLLTTA--------SGT-KMG 238
            D+             +        +    + A   +  PL+            GT KM 
Sbjct: 160 RDIAMKFNLDYAEHIRKTGYGIDITVGNEPVHAYFPMVEPLIGGPAPRVMSLRDGTKKMS 219

Query: 239 KTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEA 298
           K+             P +       +DD D +S                     K+I +A
Sbjct: 220 KS------------DPSDL-SRINLMDDEDAIS---------------------KKIRKA 245

Query: 299 KKI---IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTL 355
           K     + +E+  +  GR EA+          D S  ++ +      +  V +   L+ L
Sbjct: 246 KTDPDGLPSEVDGL-QGRPEADNLVAIYAALADKS-KAEVLAEFGGQQFSVFKPA-LVDL 302

Query: 356 IVKAGFATSTNEARRHL 372
            +    A  T E RR +
Sbjct: 303 AIHV-LAPITGEMRRLM 318


>gi|15643034|ref|NP_228077.1| 16S pseudouridylate synthase [Thermotoga maritima MSB8]
 gi|4980760|gb|AAD35352.1|AE001708_20 16S pseudouridylate synthase [Thermotoga maritima MSB8]
          Length = 239

 Score = 42.1 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 9/58 (15%), Positives = 25/58 (43%), Gaps = 1/58 (1%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
           +  +G   +  E ++ +K   + +N  ++ +    +   D  +     + F KK +I+
Sbjct: 7   LSNSG-VGTRKEVKKLIKQGRVTVNGRVVLDPGHPVLENDAVALDGEVVRFHKKVYIL 63


>gi|323465755|gb|ADX69442.1| Tryptophanyl-tRNA synthetase II [Lactobacillus helveticus H10]
          Length = 340

 Score = 42.1 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 36/225 (16%), Positives = 67/225 (29%), Gaps = 37/225 (16%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     LQ +G + P  ++    ++  +    ++ R  +    +  
Sbjct: 12  PTGK-LHIGHYIGSLKNRVKLQNSGKYDPYIMIADTQALTDNARNPEKIRNSLIQVALDY 70

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
               I             K+   + +    L  +    +     +    N  +  E  + 
Sbjct: 71  LAVGI----------DPSKSTIYVQSQIPALFELTSYYMDLVPVARLERNPTVKTEIKQK 120

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKL 221
             K    + FL  NY + QA D       +   +   G DQ   +    ++         
Sbjct: 121 DFKDSIPVGFL--NYPVSQAADITA----FKATIVPVGDDQEPMLEQTREIVRTFNR--- 171

Query: 222 FALTSPL--------------LTTASGT-KMGKTLSGAIWLNKEM 251
              T  L              L    G  KM K+L   I+L+ + 
Sbjct: 172 VYNTDILVEPKGYFPPKGSGRLPGLDGNAKMSKSLGNCIYLSDDA 216


>gi|282883330|ref|ZP_06291924.1| ribosomal protein S4 [Peptoniphilus lacrimalis 315-B]
 gi|300813858|ref|ZP_07094163.1| ribosomal protein S4 [Peptoniphilus sp. oral taxon 836 str. F0141]
 gi|281296834|gb|EFA89336.1| ribosomal protein S4 [Peptoniphilus lacrimalis 315-B]
 gi|300512045|gb|EFK39240.1| ribosomal protein S4 [Peptoniphilus sp. oral taxon 836 str. F0141]
          Length = 198

 Score = 42.1 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 26/133 (19%), Positives = 45/133 (33%), Gaps = 25/133 (18%)

Query: 291 QGKEINEAKKIIATEITTMV-HGREEAEKAATAA-----MECFDMSIHSQHMPTISISKD 344
             K +  A++  A     +  +G++  EK    A      + F           I   K 
Sbjct: 22  HPKAMKRAQRGSARSDKKLTEYGKQLLEKQRLRAYYGLLEKQFKNLF-------IEAQKA 74

Query: 345 EVSRGMGLL--------TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
           +   G  L+         L  + GFA+S  +AR+ +    I +N   +     +  + D 
Sbjct: 75  KGQTGPNLVSFLERRLDNLCYRLGFASSIRQARQMVLHGHILVNGKKVDIPSYRCDVSDE 134

Query: 397 DSTGNIKLSFGKK 409
            S        GKK
Sbjct: 135 ISLS----RKGKK 143


>gi|161869392|ref|YP_001598559.1| hypothetical protein NMCC_0399 [Neisseria meningitidis 053442]
 gi|161594945|gb|ABX72605.1| conserved hypothetical protein [Neisseria meningitidis 053442]
 gi|254673557|emb|CBA09031.1| conserved hypothetical protein [Neisseria meningitidis alpha275]
          Length = 104

 Score = 42.1 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 10/53 (18%), Positives = 22/53 (41%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
           E +  + L  L+  AG A S  +A+  +    +  N    + +  +I+  +  
Sbjct: 35  EDNEYIALCDLLKLAGLAESGGQAKALIAEGLVSRNGETETRKTAKIRGGEVI 87


>gi|149371654|ref|ZP_01891070.1| 30S ribosomal protein S4 [unidentified eubacterium SCB49]
 gi|149355281|gb|EDM43841.1| 30S ribosomal protein S4 [unidentified eubacterium SCB49]
          Length = 201

 Score = 42.1 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 19/130 (14%), Positives = 39/130 (30%), Gaps = 14/130 (10%)

Query: 278 TLPMSEIDRMAKLQGKEINEAKK-----IIATEITTMV-HGREEAEKAATAAMECFDMSI 331
                + +      G      KK      +A +      +G  E           F  + 
Sbjct: 23  DKSFEKRNYPPGQHGNNRRRGKKSEYAIQLAEKQKAKYTYGILE-----KQFRNLFKKAT 77

Query: 332 HSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
            +  +    + +   SR   ++    + G A S   AR+ +    I +N   ++    Q+
Sbjct: 78  AAPGITGQVLLQLCESRLDNVVY---RMGIAPSRPAARQLVSHRHITVNGEKVNIPSYQL 134

Query: 392 KLQDFDSTGN 401
           K  D  +   
Sbjct: 135 KAGDVVAVRE 144


>gi|327188063|gb|EGE55290.1| hemolysin A [Rhizobium etli CNPAF512]
          Length = 261

 Score = 42.1 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 8/39 (20%), Positives = 17/39 (43%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
            L+V  G   S + AR  ++   ++I   +++     I 
Sbjct: 24  QLLVSRGLFASRSRARDAVQRGTVRIGGQVVTKAGALIS 62


>gi|303236518|ref|ZP_07323103.1| pseudouridylate synthase [Prevotella disiens FB035-09AN]
 gi|302483266|gb|EFL46276.1| pseudouridylate synthase [Prevotella disiens FB035-09AN]
          Length = 505

 Score = 42.1 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 12/76 (15%), Positives = 30/76 (39%), Gaps = 5/76 (6%)

Query: 342 SKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD--ST 399
              + +  + L   +  AG   S  EA   +++  + +N  +++    +I   D      
Sbjct: 262 ENFDPNEPLRLNKYLANAGVC-SRREADEFIQAGVVTVNGEVVNELGTKILRSDVITFKG 320

Query: 400 GNIKLSFGKKNHIICH 415
             + L   KK +++ +
Sbjct: 321 QPVTLE--KKVYVLLN 334


>gi|259416904|ref|ZP_05740824.1| lysyl-tRNA synthetase [Silicibacter sp. TrichCH4B]
 gi|259348343|gb|EEW60120.1| lysyl-tRNA synthetase [Silicibacter sp. TrichCH4B]
          Length = 547

 Score = 42.1 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 16/85 (18%), Positives = 26/85 (30%), Gaps = 6/85 (7%)

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            DF           +M G D   N      +   L        T  L    +G K+ KT 
Sbjct: 236 PDFGARWAALGVDFEMYGKDHSTNTPIYDGICRVLGQRAPEHFTYELFLDENGQKISKTS 295

Query: 242 SGAIWLNKEMT------SPYNFWQY 260
              + +++ +T        Y  +Q 
Sbjct: 296 GNGVSIDEWLTYASTESLAYFMYQK 320


>gi|91201633|emb|CAJ74693.1| strongly similar to tryptophanyl-tRNA synthetase [Candidatus
           Kuenenia stuttgartiensis]
          Length = 332

 Score = 42.1 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 44/242 (18%), Positives = 85/242 (35%), Gaps = 39/242 (16%)

Query: 140 LLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGG 199
           +L  +     + RM  F+    + +   +     F Y +LQA D + + K     +   G
Sbjct: 100 ILNTVTPMGHLERMTQFKDKAKQHRDNINAGL--FTYPVLQAADIL-VYKAEAVPI---G 153

Query: 200 SDQWGNIICGIDLGERLK--------TPKLFALTSPLLTTASG-TKMGKTLSGAIWLNKE 250
            DQ  +I    ++  +           PK     +P +    G TKM K+    I L + 
Sbjct: 154 EDQVQHIELAREIARKFNSRYGEIFPDPKEILSDAPRIMGIDGKTKMSKSRDNYISLVE- 212

Query: 251 MTSPYNFWQYW---------RNIDDADVVSFAKRLTTL----PMSEIDRMAKL-QGKEIN 296
             S  + W+           +   D          T       + +I+R+ +  +  EI 
Sbjct: 213 --SSESIWKKLSTAVTDENRKRRTDPGNPEICNLFTLHKHYSSIEQIERINRECRTAEIG 270

Query: 297 --EAKKIIATEITTMVHG-REEAEKAAT----AAMECFDMSIHSQHMPTISISKDEVSRG 349
             E KKI+   I   +   RE+ E+             + +   ++M  I++++     G
Sbjct: 271 CVECKKILYENIIKALSPIREKYEELIKDKHSIIDILHEGAKKCKNMAEITMAEVRRQMG 330

Query: 350 MG 351
           + 
Sbjct: 331 LT 332


>gi|260889856|ref|ZP_05901119.1| tryptophan--tRNA ligase [Leptotrichia hofstadii F0254]
 gi|260860462|gb|EEX74962.1| tryptophan--tRNA ligase [Leptotrichia hofstadii F0254]
          Length = 305

 Score = 42.1 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 26/179 (14%), Positives = 47/179 (26%), Gaps = 36/179 (20%)

Query: 156 FESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER 215
            + V   +K    L    F Y IL A D +     Y   +   G DQ  ++    D+  +
Sbjct: 79  KDKVAKGIKPNVGL----FTYPILMAADILM----YSPDIVPVGKDQKQHLEMTRDIATK 130

Query: 216 LK---TPKLFAL-------TSPLLTTASGTKMGKTLSGAI-WLNKEMTSPYNFWQYWRNI 264
                  ++F L           +    G KM K+    I     +            +I
Sbjct: 131 FNETYGKEVFKLPKEKIVENVATVPGTDGDKMSKSYGNVINMFGSKKALKKQI----MSI 186

Query: 265 ------------DDADVVSFAKRL-TTLPMSEIDRMAKLQGKEINEAKKIIATEITTMV 310
                        D ++        T   +  +    +        AK  +  +     
Sbjct: 187 VTDSTPLEEPKDPDNNITKLYALFATETEVEALREKFRAGNFGYGHAKNELFEKFMDYF 245


>gi|119476338|ref|ZP_01616689.1| tryptophanyl-tRNA synthetase [marine gamma proteobacterium
           HTCC2143]
 gi|119450202|gb|EAW31437.1| tryptophanyl-tRNA synthetase [marine gamma proteobacterium
           HTCC2143]
          Length = 337

 Score = 42.1 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 20/93 (21%), Positives = 36/93 (38%), Gaps = 13/93 (13%)

Query: 164 KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFA 223
             + +++   F+Y IL A D +        R+ +G  DQ  ++     + +R        
Sbjct: 126 DADNAITMGLFSYPILMAADILMFN---GQRIPVG-KDQIQHVEMARVIAQRFNHHYGEL 181

Query: 224 LTSP---------LLTTASGTKMGKTLSGAIWL 247
            T P         +L+   G KM K+ +  I L
Sbjct: 182 FTLPEAQVDEDVAVLSGLDGRKMSKSYNNTIPL 214


>gi|50303855|ref|XP_451874.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49641006|emb|CAH02267.1| KLLA0B07733p [Kluyveromyces lactis]
          Length = 432

 Score = 42.1 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 20/47 (42%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           LD+         Y G   ++ S+H GH+   +   WLQ     P+ +
Sbjct: 91  LDLYEQGKPFFLYTGRGPSSDSMHLGHMIPFIFTKWLQDVFDCPLVI 137


>gi|289597181|ref|YP_003483877.1| Ribosomal protein S4E, central domain protein [Aciduliprofundum
           boonei T469]
 gi|289534968|gb|ADD09315.1| Ribosomal protein S4E, central domain protein [Aciduliprofundum
           boonei T469]
          Length = 236

 Score = 42.1 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 17/67 (25%), Positives = 33/67 (49%), Gaps = 1/67 (1%)

Query: 337 PTISISKDEVSRGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           P +S         + LL ++ +  G A++  EA++ L S  +K++  ++ + K  I   D
Sbjct: 25  PKVSPGPHGAHESIPLLVVLREILGIASNKREAKKILNSRKVKVDGRVVRDVKFPIGFMD 84

Query: 396 FDSTGNI 402
             S G+I
Sbjct: 85  VISIGDI 91


>gi|99082101|ref|YP_614255.1| lysyl-tRNA synthetase [Ruegeria sp. TM1040]
 gi|99038381|gb|ABF64993.1| lysyl-tRNA synthetase [Ruegeria sp. TM1040]
          Length = 547

 Score = 42.1 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 16/85 (18%), Positives = 26/85 (30%), Gaps = 6/85 (7%)

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            DF           +M G D   N      +   L        T  L    +G K+ KT 
Sbjct: 236 PDFGARWAALGVDFEMYGKDHSTNTPIYDGICRVLGQRAPEHFTYELFLDENGQKISKTS 295

Query: 242 SGAIWLNKEMT------SPYNFWQY 260
              + +++ +T        Y  +Q 
Sbjct: 296 GNGVSIDEWLTYASTESLAYFMYQK 320


>gi|319940768|ref|ZP_08015108.1| tryptophanyl-tRNA synthetase [Sutterella wadsworthensis 3_1_45B]
 gi|319805788|gb|EFW02564.1| tryptophanyl-tRNA synthetase [Sutterella wadsworthensis 3_1_45B]
          Length = 437

 Score = 42.1 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 19/95 (20%), Positives = 33/95 (34%), Gaps = 17/95 (17%)

Query: 166 EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT------P 219
           +  +S   F+Y +L A D +    + +  +   G DQ  ++    D   R          
Sbjct: 128 DADVSMGLFSYPVLMAADILMFNAD-EVPV---GHDQLQHLEMARDAASRFNNLYCSPDK 183

Query: 220 KLFAL-------TSPLLTTASGTKMGKTLSGAIWL 247
             F +          +L    G KM K+ +  I L
Sbjct: 184 PFFVMPQATGGSALEVLPGLDGRKMSKSYNNVIPL 218


>gi|115667647|ref|XP_001200340.1| PREDICTED: hypothetical protein, partial [Strongylocentrotus
           purpuratus]
 gi|115699702|ref|XP_798138.2| PREDICTED: hypothetical protein, partial [Strongylocentrotus
           purpuratus]
          Length = 138

 Score = 42.1 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 21/105 (20%), Positives = 40/105 (38%), Gaps = 12/105 (11%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSF 86
           LD+  ++     Y G   ++SS+H GHL   +   WLQ     P+ +             
Sbjct: 42  LDLYEAKKPFFLYTGRGPSSSSMHVGHLIPFIFTKWLQDVFDVPLVV-----------QM 90

Query: 87  RDESRRMMRSQEIQENIEKIKGIFSS-FIKYGTGKTDALMLNNET 130
            D+ + + R  E  +  +++    +   I  G  K    + +N  
Sbjct: 91  TDDEKFLWRELETPDVAQELAYQNAKDIISCGFHKDKTFIFSNID 135


>gi|310286563|ref|YP_003937821.1| tryptophanyl-tRNA synthetase [Bifidobacterium bifidum S17]
 gi|309250499|gb|ADO52247.1| tryptophanyl-tRNA synthetase [Bifidobacterium bifidum S17]
          Length = 365

 Score = 42.1 bits (98), Expect = 0.19,   Method: Composition-based stats.
 Identities = 35/256 (13%), Positives = 73/256 (28%), Gaps = 42/256 (16%)

Query: 22  SNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSI 80
           S+     +    G  T   G   T   LH GH    +     +Q  G     ++      
Sbjct: 27  SDATLAKLEAEPGKFTMLTGDRPTGR-LHLGHYFGSIKERVAMQNRGVNTNIIIADY--- 82

Query: 81  IGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY----GTGKTDALMLNNETWLCSIK 136
                      +++  ++  E+I+    + +  + Y           +  ++     +  
Sbjct: 83  -----------QVITDRDTTEHIQ--DNVLNLVLDYMAAGIDPAKTMMFTHSAVPAENQL 129

Query: 137 YIDLLREIGSFFSVNRMLSFESVRSRLK-REQSLSFLEFNYMILQAYDFVELAKNYDCRL 195
            +  L  +             +V+S ++    +L+ L   Y + QA D   L    +   
Sbjct: 130 LLPFLSLVTEAELHRNP----TVKSEMEASGHALTGLLLTYPVHQACD--ILFCKANVV- 182

Query: 196 QMGGSDQWGNIICGIDLGERLKT----------PKLFALTS-PLLTTASGTKMGKTLSGA 244
              G D   ++     +  R                  L+  P +    G KM K+   +
Sbjct: 183 -PIGKDNLPHVEITRTIARRFNERYAKKNPVFPEPAAILSDAPEIPGLDGRKMSKSYGNS 241

Query: 245 IWLNKEMTSPYNFWQY 260
           I L           + 
Sbjct: 242 IMLGATAEETAKLIKK 257


>gi|229031033|ref|ZP_04187047.1| Tryptophanyl-tRNA synthetase [Bacillus cereus AH1271]
 gi|228730279|gb|EEL81245.1| Tryptophanyl-tRNA synthetase [Bacillus cereus AH1271]
          Length = 327

 Score = 42.1 bits (98), Expect = 0.19,   Method: Composition-based stats.
 Identities = 22/96 (22%), Positives = 34/96 (35%), Gaps = 17/96 (17%)

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLF 222
           L+ +  ++   + Y IL A D + L +     +   G DQ  +I    D+         F
Sbjct: 118 LEVDAGVNMGLYTYPILMAADIL-LFQATYVPV---GKDQIQHIEIARDIATYFN--HTF 171

Query: 223 ALTSPL-----------LTTASGTKMGKTLSGAIWL 247
            +T  L           L    G KM K+    I L
Sbjct: 172 GMTFTLPEYVIQEEGAILPGLDGRKMSKSYGNVIPL 207


>gi|229145926|ref|ZP_04274305.1| Tryptophanyl-tRNA synthetase [Bacillus cereus BDRD-ST24]
 gi|228637534|gb|EEK93985.1| Tryptophanyl-tRNA synthetase [Bacillus cereus BDRD-ST24]
          Length = 327

 Score = 42.1 bits (98), Expect = 0.19,   Method: Composition-based stats.
 Identities = 22/96 (22%), Positives = 33/96 (34%), Gaps = 17/96 (17%)

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLF 222
           L+ +  ++   + Y IL A D + L +     +   G DQ  +I    D+         F
Sbjct: 118 LEVDAGVNMGLYTYPILMAADIL-LFQATHVPV---GKDQIQHIEIARDIATYFN--HTF 171

Query: 223 ALTSPL-----------LTTASGTKMGKTLSGAIWL 247
             T  L           L    G KM K+    I L
Sbjct: 172 GTTFTLPEYVVQEEGAILPGLDGRKMSKSYGNVIPL 207


>gi|224025961|ref|ZP_03644327.1| hypothetical protein BACCOPRO_02712 [Bacteroides coprophilus DSM
           18228]
 gi|224019197|gb|EEF77195.1| hypothetical protein BACCOPRO_02712 [Bacteroides coprophilus DSM
           18228]
          Length = 391

 Score = 42.1 bits (98), Expect = 0.19,   Method: Composition-based stats.
 Identities = 35/231 (15%), Positives = 64/231 (27%), Gaps = 44/231 (19%)

Query: 44  LTASSLHAGHLTQLMLLFW---LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH      L     LQ +G      +            +  +  +   ++++
Sbjct: 40  PTGK-LHIGHYVG--SLRRRVELQNSGLYDRIFVFEA-------DGQALTDNIENPEKVR 89

Query: 101 ENIEKIKGIFSSFIKY-----GTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLS 155
           +N+          + Y        K+   + +    L  + +   +  +           
Sbjct: 90  QNV------IEVALDYLAAGLDPTKSTIFIQSQIPELYELSFY-FMDLVTVSRLQRNPTV 142

Query: 156 FESVRSR-LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
              ++ R  +    + F  F Y I QA D           +  G  DQ   I    ++  
Sbjct: 143 KTEIQMRNFETSIPVGF--FTYPISQAADIAAFKA---TTVPAG-EDQEPMIEQAREIVR 196

Query: 215 RLK-------TPKLFALTSPL----LTTASGT-KMGKTLSGAIWLNKEMTS 253
           R               L        L    G  KM K+L   I+L+     
Sbjct: 197 RFNYIYGETLVEPEILLPDNAACLRLPGTDGKAKMSKSLGNCIYLSDPADE 247


>gi|225865333|ref|YP_002750711.1| putative tryptophanyl-tRNA synthetase [Bacillus cereus 03BB102]
 gi|225788790|gb|ACO29007.1| putative tryptophanyl-tRNA synthetase [Bacillus cereus 03BB102]
          Length = 332

 Score = 42.1 bits (98), Expect = 0.19,   Method: Composition-based stats.
 Identities = 22/96 (22%), Positives = 33/96 (34%), Gaps = 17/96 (17%)

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLF 222
           L+ +  ++   + Y IL A D + L +     +   G DQ  +I    D+         F
Sbjct: 123 LELDAGVNMGLYTYPILMAADIL-LFQATHVPV---GKDQIQHIEIARDIATYFN--HTF 176

Query: 223 ALTSPL-----------LTTASGTKMGKTLSGAIWL 247
             T  L           L    G KM K+    I L
Sbjct: 177 GTTFTLPQYVIQEEGAILPGVDGRKMSKSYGNVIPL 212


>gi|313232490|emb|CBY24158.1| unnamed protein product [Oikopleura dioica]
          Length = 489

 Score = 42.1 bits (98), Expect = 0.19,   Method: Composition-based stats.
 Identities = 13/50 (26%), Positives = 24/50 (48%)

Query: 24  PRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
            + LD+   +     Y G   ++ ++H GHL   ++  WLQ T   P+ +
Sbjct: 129 EQILDLYEQKKPFYLYTGRGPSSQAMHLGHLVPFIMTKWLQDTFDVPLVI 178


>gi|327463826|gb|EGF10142.1| tryptophan--tRNA ligase [Streptococcus sanguinis SK1057]
 gi|327467746|gb|EGF13240.1| tryptophan--tRNA ligase [Streptococcus sanguinis SK330]
          Length = 341

 Score = 41.7 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 42/232 (18%), Positives = 64/232 (27%), Gaps = 48/232 (20%)

Query: 44  LTASSLHAGHLTQ-LMLLFWLQKTGHKPISLM----GGGTSIIGDPSFRDESRRMMRSQE 98
            T   LH GH    L     LQ  G   + +        T    DP              
Sbjct: 12  PTGK-LHIGHYVGSLRNRVLLQDQGKYEMFVFLADQQALTDHAKDPQ------------- 57

Query: 99  IQENIEKIKGIFSSFIK--YGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSF 156
               +E I  +   ++       K    + +    L  +    +     +    N  +  
Sbjct: 58  --TIVESIGNVALDYLAAGLDPEKVTIFIQSQIPELAELSMYYMNLVSLARLERNPTVKT 115

Query: 157 ESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL 216
           E  +          FL   Y I QA D      NY   + +G  DQ   I    ++    
Sbjct: 116 EIAQKGFGESLPTGFL--VYPISQAADITAFKANY---VPVG-HDQKPMIEQTREIVRSF 169

Query: 217 KTPKLFALTSPL---------------LTTASGT-KMGKTLSGAIWLNKEMT 252
                   T  L               L    G  KM K+L+  I+L+ +M 
Sbjct: 170 NNAYQ---TDVLVEPEGIYPENEAAGRLPGLDGNAKMSKSLNNGIYLSDDMD 218


>gi|152976091|ref|YP_001375608.1| tryptophanyl-tRNA synthetase [Bacillus cereus subsp. cytotoxis NVH
           391-98]
 gi|152024843|gb|ABS22613.1| tryptophanyl-tRNA synthetase [Bacillus cytotoxicus NVH 391-98]
          Length = 331

 Score = 41.7 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 29/232 (12%), Positives = 67/232 (28%), Gaps = 42/232 (18%)

Query: 41  GYDLTASSLHAGHLTQLML--LFWLQKTGHKPISLMGGGTSI--IGDPSFRDESRRMMRS 96
           G   T    H G+    +   L   + +  + +  +    ++  I +  +          
Sbjct: 9   GIKPTGHP-HLGNYIGAIKPALEMAKNSNLQGMYFIADYHALNAIQNSQYFRN----FTY 63

Query: 97  QEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLS- 155
           +     +             G    + +          ++   +L  +     +NR  + 
Sbjct: 64  EIAAAWLA-----------LGLDPENVIFYRQSDIPEILELHWILSCLTPKGLMNRAHAY 112

Query: 156 FESVRSRLKRE----QSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGID 211
              +    +        ++   + Y IL A D +    N+   + +G  DQ  ++    D
Sbjct: 113 KGKINKNREEGIDIDHGINMGLYTYPILMASDILMFQSNF---VPVG-KDQIQHVEIARD 168

Query: 212 LGERLKTPKLFALTSPL-----------LTTASGTKMGKTLSGAIWLNKEMT 252
           +         +  T  L           L    G KM K+    I L ++ +
Sbjct: 169 IASYFN--HTYGETFSLPEYIIQENTEMLPGLDGRKMSKSYGNVIPLFEDPS 218


>gi|307297368|ref|ZP_07577174.1| ribosomal protein S4 [Thermotogales bacterium mesG1.Ag.4.2]
 gi|306916628|gb|EFN47010.1| ribosomal protein S4 [Thermotogales bacterium mesG1.Ag.4.2]
          Length = 208

 Score = 41.7 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 19/42 (45%)

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
           GFA+S  +AR+ +    + +N   ++     +++ D      
Sbjct: 108 GFASSRRQARQLVNHGHVLVNGRRVNKPSFNLRVGDIVEIKE 149


>gi|304386421|ref|ZP_07368754.1| tryptophan--tRNA ligase [Pediococcus acidilactici DSM 20284]
 gi|304327778|gb|EFL95005.1| tryptophan--tRNA ligase [Pediococcus acidilactici DSM 20284]
          Length = 340

 Score = 41.7 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 36/227 (15%), Positives = 75/227 (33%), Gaps = 37/227 (16%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGH-KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     LQ TG+     ++    ++  +    ++ R  +    +  
Sbjct: 13  PTGK-LHIGHYVGSLKNRVQLQNTGNYDTFIMIADMQALTDNARDPEKIRNSLIQVALDY 71

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
               I             K+   + +    L  +      +   +  SV+R+    +V++
Sbjct: 72  LAVGI----------DPAKSTIFVQSQIPALSELT-----QHYMNLVSVSRLERNPTVKT 116

Query: 162 RLKR---EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
            +K+    QS+      Y + QA D      +    + +G  DQ   +    ++      
Sbjct: 117 EIKQKAFGQSIPAGFLTYPVSQAADITAFKAD---TVPVG-DDQEPMLEQTREIVRSFNN 172

Query: 219 -------PKLFALTSPL----LTTASGT-KMGKTLSGAIWLNKEMTS 253
                   +      P     +    G  KM K+L+ AI+L  +  +
Sbjct: 173 IYGKDVLVEPEGYFPPKGMGRIPGLDGNAKMSKSLNNAIYLADDADT 219


>gi|283782537|ref|YP_003373291.1| tryptophan--tRNA ligase [Gardnerella vaginalis 409-05]
 gi|298253005|ref|ZP_06976797.1| tryptophanyl-tRNA synthetase [Gardnerella vaginalis 5-1]
 gi|283441803|gb|ADB14269.1| tryptophan--tRNA ligase [Gardnerella vaginalis 409-05]
 gi|297532400|gb|EFH71286.1| tryptophanyl-tRNA synthetase [Gardnerella vaginalis 5-1]
          Length = 363

 Score = 41.7 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 37/256 (14%), Positives = 76/256 (29%), Gaps = 42/256 (16%)

Query: 22  SNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSI 80
           S+     +  S    T   G   T   LH GH    +     +Q+ G K   ++      
Sbjct: 25  SDATLEKLQASPSSFTMLTGDRPTGR-LHLGHYFGSIRERVAMQQRGVKTNIIIADY--- 80

Query: 81  IGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY----GTGKTDALMLNNETWLCSIK 136
                      +++  ++  E+IE    + +  + Y       +   +  ++     +  
Sbjct: 81  -----------QVITDRDTTEHIE--DNVLNLVLDYMAAGIDPEKTMIFTHSAVPAANQL 127

Query: 137 YIDLLREIGSFFSVNRMLSFESVRSRLKR-EQSLSFLEFNYMILQAYDFVELAKNYDCRL 195
            +  L  +             +V+S ++    +L+ L   Y + QA D   L    +   
Sbjct: 128 MLPFLSLVTEAELHRNP----TVKSEMESSGHALTGLLLTYPVHQACD--ILFCKANVV- 180

Query: 196 QMGGSDQWGNIICGIDLGERLKT----------PKLFALTS-PLLTTASGTKMGKTLSGA 244
              G D   ++     +  R                  L+  P +    G KM K+   +
Sbjct: 181 -PIGKDNLPHVEITRTIARRFNERYAKKNPVFPEPAAILSDAPEIPGLDGRKMSKSYGNS 239

Query: 245 IWLNKEMTSPYNFWQY 260
           I L           + 
Sbjct: 240 IMLGATAEETAKLIKK 255


>gi|260591212|ref|ZP_05856670.1| ribosomal large subunit pseudouridine synthase B [Prevotella
           veroralis F0319]
 gi|260537077|gb|EEX19694.1| ribosomal large subunit pseudouridine synthase B [Prevotella
           veroralis F0319]
          Length = 253

 Score = 41.7 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 13/74 (17%), Positives = 30/74 (40%), Gaps = 1/74 (1%)

Query: 342 SKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
              + +  + L   +  AG   S  EA   + S A+ +N  ++     ++   D     +
Sbjct: 10  ENFDPNEPIRLNKYLANAGVC-SRREADEFILSGAVTVNGEVVKELGSKVLRTDVVLFQD 68

Query: 402 IKLSFGKKNHIICH 415
             +S  KK +++ +
Sbjct: 69  KPVSLEKKVYVLLN 82


>gi|228959544|ref|ZP_04121227.1| hypothetical protein bthur0005_30250 [Bacillus thuringiensis
           serovar pakistani str. T13001]
 gi|228800113|gb|EEM47047.1| hypothetical protein bthur0005_30250 [Bacillus thuringiensis
           serovar pakistani str. T13001]
          Length = 345

 Score = 41.7 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 22/96 (22%), Positives = 33/96 (34%), Gaps = 17/96 (17%)

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLF 222
           L+ +  ++   + Y IL A D + L +     +   G DQ  +I    D+         F
Sbjct: 136 LEVDAGVNMGLYTYPILMAADIL-LFQATHVPV---GKDQIQHIEIARDIATYFN--HTF 189

Query: 223 ALTSPL-----------LTTASGTKMGKTLSGAIWL 247
             T  L           L    G KM K+    I L
Sbjct: 190 GTTFTLPEYVIQEEGAILPGLDGRKMSKSYGNVIPL 225


>gi|297618743|ref|YP_003706848.1| 30S ribosomal protein S4 [Methanococcus voltae A3]
 gi|297377720|gb|ADI35875.1| ribosomal protein S4 [Methanococcus voltae A3]
          Length = 177

 Score = 41.7 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 21/167 (12%), Positives = 57/167 (34%), Gaps = 24/167 (14%)

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKI 301
               W+ + +    +  Q +  I+  ++     +L                +      + 
Sbjct: 14  PNHPWIGERINKERDLSQKYGLINKKELWKMETQL----------------RNYRRQARK 57

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGM---GLLTLIVK 358
           + +  T         ++A           I ++  PT+          +    L T++ +
Sbjct: 58  LISNTTAQ-----GVKEAIQLFAVLKRYGILNEQEPTLDHVLSLNIENILDRRLQTIVYE 112

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLS 405
            G A +  +AR+ +    I +N   +S+    ++L++ D+   + +S
Sbjct: 113 KGLARTPKQARQFIVHGHIAVNGRKVSSPSYLVELEESDAISYVGIS 159


>gi|134103023|ref|YP_001108684.1| tryptophanyl-tRNA synthetase [Saccharopolyspora erythraea NRRL
           2338]
 gi|133915646|emb|CAM05759.1| tryptophanyl-tRNA synthetase [Saccharopolyspora erythraea NRRL
           2338]
          Length = 328

 Score = 41.7 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 47/300 (15%), Positives = 95/300 (31%), Gaps = 55/300 (18%)

Query: 41  GYDLTASSLHAGHLTQLM----LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRS 96
           G   TA S H G+    +    ++       +  + L     ++  DP      R  + +
Sbjct: 4   GIQPTADSFHLGNYLGALREWVVMQETHDAFYCVVDL--HAITMGHDPELLRR-RTRLSA 60

Query: 97  QEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSF 156
            ++       +        +    T        +W        ++  +  F    RM  F
Sbjct: 61  AQLLALGIDPERATLFVQSHVPEHTQ------LSW--------VMECLTGFGEAGRMTQF 106

Query: 157 ESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL 216
           +   +R +    +S   F Y +LQA D + + +     +   G DQ  ++    +L +R 
Sbjct: 107 KDKSAR-QEADHVSVGLFTYPVLQAADIL-IYQADAVPV---GEDQRQHLELTRNLAQRF 161

Query: 217 KTPKLFALTSPL------------LTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRN- 263
            +      T P             L   +  KM K++   +   + +  P    +  R+ 
Sbjct: 162 NSRFGETFTVPAAHIPKETAKIFDLQDPT-VKMSKSVPAGV--VELLEDPKRSVKKIRSA 218

Query: 264 IDDA------------DVVSFAKRLTTLPMSEIDRMAKL-QGKEINEAKKIIATEITTMV 310
           + DA             V +     + L    I  +    +GK   + KK +   +   V
Sbjct: 219 VTDAGREIQYDPENKPGVSNLLVIYSALTGRSIADLEAAYEGKGYGDLKKELGQTVLEFV 278


>gi|190890053|ref|YP_001976595.1| tryptophanyl-tRNA synthetase [Rhizobium etli CIAT 652]
 gi|190695332|gb|ACE89417.1| tryptophanyl-tRNA synthetase protein [Rhizobium etli CIAT 652]
          Length = 354

 Score = 41.7 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 60/377 (15%), Positives = 119/377 (31%), Gaps = 94/377 (24%)

Query: 31  CSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDES 90
            S+     + G   T + LH G+    +  F   + G+  I  +    +           
Sbjct: 1   MSEFKKLVFSGVQPTGN-LHLGNYLGAIRRFVALQEGNDCIYCVVDMHA----------- 48

Query: 91  RRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFS- 149
              + +Q + E++       ++         +  ++ N++ +     +  +    +    
Sbjct: 49  ---LTAQLVHEDMPSQTRSIAAAFIAAGIDPEKHIVFNQSAVPQHAELAWIFNCVARIGW 105

Query: 150 VNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICG 209
           +NRM  F+    + + + SL    + Y  L A D + + +     +   G DQ  ++   
Sbjct: 106 MNRMTQFKDKAGKDREQASLGL--YAYPSLMAADIL-VYRATHVPV---GEDQKQHLELA 159

Query: 210 IDLG-------------------ERLKTPKLFA---LTSPLLTTA--------SGT-KMG 238
            D+                      +    + A   +  PL+            GT KM 
Sbjct: 160 RDIAMKFNLDYAQHIARTGYGIDITVGDEPVHAYFPMVEPLIGGPAPRVMSLRDGTKKMS 219

Query: 239 KTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEA 298
           K+             P +       +DD D +S                     K+I +A
Sbjct: 220 KS------------DPSDL-SRINLMDDEDAIS---------------------KKIRKA 245

Query: 299 KKI---IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTL 355
           K     + +EI  +  GR EA+          D S  S+ +      +  V +   L+ L
Sbjct: 246 KTDPDGLPSEIDGL-QGRPEADNLVAIYAALADKS-KSEVLAEFGGQQFSVFKPA-LVDL 302

Query: 356 IVKAGFATSTNEARRHL 372
            +    A  T E RR +
Sbjct: 303 AIHV-LAPITGEMRRLM 318


>gi|47564490|ref|ZP_00235535.1| tryptophanyl-tRNA synthetase [Bacillus cereus G9241]
 gi|47558642|gb|EAL16965.1| tryptophanyl-tRNA synthetase [Bacillus cereus G9241]
          Length = 332

 Score = 41.7 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 22/96 (22%), Positives = 33/96 (34%), Gaps = 17/96 (17%)

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLF 222
           L+ +  ++   + Y IL A D + L +     +   G DQ  +I    D+         F
Sbjct: 123 LEVDAGVNMGLYTYPILMAADIL-LFQATHVPV---GKDQIQHIEIARDIATYFN--HTF 176

Query: 223 ALTSPL-----------LTTASGTKMGKTLSGAIWL 247
             T  L           L    G KM K+    I L
Sbjct: 177 GTTFTLPKYVIQEEGAILPGLDGRKMSKSYGNVIPL 212


>gi|323359145|ref|YP_004225541.1| tryptophanyl-tRNA synthetase [Microbacterium testaceum StLB037]
 gi|323275516|dbj|BAJ75661.1| tryptophanyl-tRNA synthetase [Microbacterium testaceum StLB037]
          Length = 350

 Score = 41.7 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 36/214 (16%), Positives = 61/214 (28%), Gaps = 29/214 (13%)

Query: 44  LTASSLHAGHLTQLMLLFW-LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN 102
            T   LH GH    +     LQ  G +   ++     I          R  +  + + +N
Sbjct: 33  PTGR-LHLGHYFGTLSERAVLQSRGVEVFLVLADYQVI--------TDRDTL--ENVADN 81

Query: 103 IEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR 162
           +  I  +              +  ++         +  L  +                  
Sbjct: 82  VGDI--VLDYLAAGLDPLGTTIFPHSAVPSLHQLLLPFLSLVTEAELHRNPTVK---AET 136

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PK 220
               ++LS L   Y + QA D +    N    L   G D   ++     +  R       
Sbjct: 137 AASGRALSGLMLTYPVHQAADILFCKGN----LVPVGKDNLPHVELTRVVARRFNERFGP 192

Query: 221 LF------ALTSPLLTTASGTKMGKTLSGAIWLN 248
           +F        TSP +    G KM K+   AI L 
Sbjct: 193 VFPEPEPLVTTSPEVPGVDGRKMSKSYGNAIALG 226


>gi|296503857|ref|YP_003665557.1| tryptophanyl-tRNA synthetase [Bacillus thuringiensis BMB171]
 gi|296324909|gb|ADH07837.1| tryptophanyl-tRNA synthetase [Bacillus thuringiensis BMB171]
          Length = 332

 Score = 41.7 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 22/96 (22%), Positives = 33/96 (34%), Gaps = 17/96 (17%)

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLF 222
           L+ +  ++   + Y IL A D + L +     +   G DQ  +I    D+         F
Sbjct: 123 LEVDAGVNMGLYTYPILMAADIL-LFQATHVPV---GKDQIQHIEIARDIATYFN--HTF 176

Query: 223 ALTSPL-----------LTTASGTKMGKTLSGAIWL 247
             T  L           L    G KM K+    I L
Sbjct: 177 GTTFTLPEYVVQEEGAILPGLDGRKMSKSYGNVIPL 212


>gi|270290922|ref|ZP_06197146.1| tryptophanyl-tRNA synthetase [Pediococcus acidilactici 7_4]
 gi|270280982|gb|EFA26816.1| tryptophanyl-tRNA synthetase [Pediococcus acidilactici 7_4]
          Length = 340

 Score = 41.7 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 36/227 (15%), Positives = 75/227 (33%), Gaps = 37/227 (16%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGH-KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     LQ TG+     ++    ++  +    ++ R  +    +  
Sbjct: 13  PTGK-LHIGHYVGSLKNRVQLQNTGNYDTFIMIADMQALTDNARDPEKIRNSLIQVALDY 71

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
               I             K+   + +    L  +      +   +  SV+R+    +V++
Sbjct: 72  LAVGI----------DPAKSTIFVQSQIPALSELT-----QHYMNLVSVSRLERNPTVKT 116

Query: 162 RLKR---EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
            +K+    QS+      Y + QA D      +    + +G  DQ   +    ++      
Sbjct: 117 EIKQKAFGQSIPAGFLTYPVSQAADITAFKAD---TVPVG-DDQEPMLEQTREIVRSFNN 172

Query: 219 -------PKLFALTSPL----LTTASGT-KMGKTLSGAIWLNKEMTS 253
                   +      P     +    G  KM K+L+ AI+L  +  +
Sbjct: 173 IYGKDVLVEPEGYFPPKGMGRIPGLDGNAKMSKSLNNAIYLADDADT 219


>gi|332827561|gb|EGK00307.1| tryptophanyl-tRNA synthetase [Dysgonomonas gadei ATCC BAA-286]
          Length = 329

 Score = 41.7 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 42/289 (14%), Positives = 84/289 (29%), Gaps = 52/289 (17%)

Query: 49  LHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIK 107
           LH G+    L     +Q   +K    +    S+   P  +     +      +     I 
Sbjct: 14  LHLGNYFGALRNFTRMQ-HENKCFFFIADYHSLTTHPDPKILHGNVKGVLT-EYLAAGID 71

Query: 108 GIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ 167
              S+            +         +     L E+    S       E  R     + 
Sbjct: 72  PEISTIYIQSDVTEVCEL------YLLLNMHAYLGELSKTVSF-----KEKARKH---QD 117

Query: 168 SLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--------P 219
           +++     Y  L A D + L       +   G DQ  ++        R            
Sbjct: 118 NVNAGLLTYPTLMAADIL-LHNADKVPV---GKDQEQHLEMTRKFARRFNNLYGVEYFKE 173

Query: 220 KL---FALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYW-RNIDD-------- 266
            +   F      +    G+ KMGK+    I+L+++   P +  +   R + D        
Sbjct: 174 PVAYNFGQELIKIPGLDGSGKMGKSEGNCIYLDED---PKSIEKKVKRALTDEGPKAPNS 230

Query: 267 ---ADVVSFAKRLTTLPMSEIDRMAKLQGK--EIN--EAKKIIATEITT 308
                + +    L  +   ++ +  + +    EI   + KK +A +I  
Sbjct: 231 EKPEYIENLFTILKVVSTEDVVQHFEDKWNTCEIRYGDLKKQLAEDIIK 279


>gi|306842278|ref|ZP_07474940.1| hemolysin A [Brucella sp. BO2]
 gi|306287586|gb|EFM59037.1| hemolysin A [Brucella sp. BO2]
          Length = 253

 Score = 41.7 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 8/45 (17%), Positives = 20/45 (44%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
            L+V+ GF  + + AR  ++   +K++   I+     +      +
Sbjct: 14  QLLVERGFFATRSRARDAIQRGTVKVDGRPITKPGQMVARDAALA 58


>gi|306845066|ref|ZP_07477646.1| hemolysin A [Brucella sp. BO1]
 gi|306274481|gb|EFM56276.1| hemolysin A [Brucella sp. BO1]
          Length = 253

 Score = 41.7 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 8/41 (19%), Positives = 19/41 (46%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
            L+V+ GF  + + AR  ++   +K++   I+     +   
Sbjct: 14  QLLVERGFFATRSRARDAIQRGTVKVDGRPITKPGQMVARD 54


>gi|145242130|ref|XP_001393711.1| tryptophanyl-tRNA synthetase, cytoplasmic [Aspergillus niger CBS
           513.88]
 gi|134078256|emb|CAK96837.1| unnamed protein product [Aspergillus niger]
          Length = 433

 Score = 41.7 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 17/61 (27%), Positives = 22/61 (36%), Gaps = 1/61 (1%)

Query: 15  RGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +   +  L  +G     Y G   +  SLH GH   L    WLQ     P+  
Sbjct: 68  RGLFFSHRDFDRILTLYERGEPFFLYTGRGPSTGSLHLGHTIPLQFTKWLQDVFDVPLVF 127

Query: 74  M 74
           M
Sbjct: 128 M 128


>gi|309776034|ref|ZP_07671026.1| tryptophan--tRNA ligase [Erysipelotrichaceae bacterium 3_1_53]
 gi|308916316|gb|EFP62064.1| tryptophan--tRNA ligase [Erysipelotrichaceae bacterium 3_1_53]
          Length = 328

 Score = 41.7 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 45/301 (14%), Positives = 92/301 (30%), Gaps = 47/301 (15%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   T   L  G+    +  F   +  ++    +    + I  P  R E  +      I 
Sbjct: 7   GIKPTGR-LTLGNYIGAIRNFVAYQDDYEMYVFIANMHA-ITVPQERAEL-KKNTKDLIA 63

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFS-VNRMLSFESV 159
             +             G       +      +     +  +    S+   + RM  ++  
Sbjct: 64  LYLAA-----------GLDPEKVTIFLQSD-VHEHAELGWIMTCNSYMGELQRMTQYKD- 110

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT- 218
               K E  ++   F Y  L A D +    +Y   + +G  DQ  ++    +L ER    
Sbjct: 111 -KTAKGETGITAGLFTYPSLMAADILLYDADY---VPVG-LDQKQHVELTRNLAERFNNR 165

Query: 219 -PKLFALTSPLLTTASGT---------KMGKTLSGAIWLNKEMTSPYNFWQYWRN-IDDA 267
               F +  PL++              KM K+          +  P    +   + + D+
Sbjct: 166 YGDTFVVPEPLVSKVGAKIYSLQDPTKKMSKSEENPKGTIDLLDEPSVARKKIMSAVTDS 225

Query: 268 D------------VVSFAKRLTTLPMSEIDRM-AKLQGKEINEAKKIIATEITTMVHGRE 314
                        V +    L++L    I+ + A+ +GK   + KK +   +   +   +
Sbjct: 226 IGIIQYDPENQPGVSNLLTILSSLNGESIEDIVARYEGKGYGDFKKEVGAAVFDFLSDLQ 285

Query: 315 E 315
            
Sbjct: 286 A 286


>gi|301054847|ref|YP_003793058.1| putative tryptophan--tRNA ligase [Bacillus anthracis CI]
 gi|300377016|gb|ADK05920.1| putative tryptophan--tRNA ligase [Bacillus cereus biovar anthracis
           str. CI]
          Length = 332

 Score = 41.7 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 22/96 (22%), Positives = 33/96 (34%), Gaps = 17/96 (17%)

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLF 222
           L+ +  ++   + Y IL A D + L +     +   G DQ  +I    D+         F
Sbjct: 123 LEVDAGVNMGLYTYPILMAADIL-LFQATHVPV---GKDQIQHIEIARDIATYFN--HTF 176

Query: 223 ALTSPL-----------LTTASGTKMGKTLSGAIWL 247
             T  L           L    G KM K+    I L
Sbjct: 177 GTTFTLPEYVIQEEGAILPGLDGRKMSKSYGNVIPL 212


>gi|242801730|ref|XP_002483827.1| tryptophanyl-tRNA synthetase [Talaromyces stipitatus ATCC 10500]
 gi|218717172|gb|EED16593.1| tryptophanyl-tRNA synthetase [Talaromyces stipitatus ATCC 10500]
          Length = 442

 Score = 41.7 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 13/52 (25%), Positives = 19/52 (36%), Gaps = 1/52 (1%)

Query: 15  RGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           RG      +  + LD   +      Y G   ++ +LH GH        WLQ 
Sbjct: 81  RGLFFSHRDFDKILDKYEAGEPFFMYTGRGPSSDALHLGHTIPFSFTKWLQD 132


>gi|192360220|ref|YP_001982545.1| tryptophanyl-tRNA synthetase [Cellvibrio japonicus Ueda107]
 gi|190686385|gb|ACE84063.1| tryptophanyl-tRNA synthetase [Cellvibrio japonicus Ueda107]
          Length = 335

 Score = 41.7 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 30/214 (14%), Positives = 71/214 (33%), Gaps = 33/214 (15%)

Query: 50  HAGHLTQLM--LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIK 107
           H G+    +   +   Q+   +    +    ++I          +     ++Q++  +I 
Sbjct: 17  HLGNYVGAIRPAITASQRADVQSFYFLADFHALI----------KCQDPAQVQQSTREIA 66

Query: 108 GIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLS-FESVRSRLKRE 166
             +   +  G    +A+           +   +L  + +   +NR  +   +V +  +  
Sbjct: 67  ATW---LALGLNTDNAIFYRQSDVPEIPELCWVLTCMAAKGLMNRAHAYKAAVDANQEAG 123

Query: 167 Q----SLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLF 222
           +     ++   ++Y +L A D + +   +   +   G DQ  +I    D+  R       
Sbjct: 124 EDPDYGITMGLYSYPVLMAADIL-MFNAHKVPV---GRDQIQHIEMARDIAARFNHHYGE 179

Query: 223 ALTSP---------LLTTASGTKMGKTLSGAIWL 247
               P         +L    G KM K+    I L
Sbjct: 180 HFVLPEALVDDNVAVLQGLDGRKMSKSYGNTIPL 213


>gi|313678528|ref|YP_004056268.1| tryptophan--tRNA ligase [Mycoplasma bovis PG45]
 gi|312950703|gb|ADR25298.1| tryptophan--tRNA ligase [Mycoplasma bovis PG45]
          Length = 331

 Score = 41.7 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 55/342 (16%), Positives = 108/342 (31%), Gaps = 56/342 (16%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   T   L  G+    +  F   +  ++    +    S+             M      
Sbjct: 8   GIKPTGD-LTLGNYIGAIKNFVKLQDEYESYYFVADLHSL------------TMGDNNAD 54

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLS-FESV 159
           E  ++ K I +S++  G       +              LL    +   ++RM    +  
Sbjct: 55  ELEKRRKEIVASYLACGLDPNKCTIFYQSDIYEHTLVQWLLTCESTMGELSRMTQYKDKS 114

Query: 160 RSRLKREQS---LSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL 216
           +  LK+      +    F Y  L A D +     YD      G DQ  ++     L ER+
Sbjct: 115 QGALKQANGTEKIPVGLFMYPTLMASDILI----YDADFVPIGEDQVQHLELTRMLAERI 170

Query: 217 KTPKLFALTSPL-LTTASGT----------KMGKTL---SGAIWLNKEMTSPYNFWQYWR 262
                  L  P  +    G           KM K+     G I+LN +   P   ++   
Sbjct: 171 NKKYQLDLKIPTGIIPKEGARIKSLSDPTAKMSKSEKTSKGTIYLNDD---PEVAYKKIM 227

Query: 263 -NIDDAD--------------VVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
            ++ D++              +++    LT + +  ++  A+ +     E K  +AT + 
Sbjct: 228 KSVTDSENKVYISNDKPGILNLLNIYAALTNITL--VEAEAQFKDSNYVEFKTAVATVVK 285

Query: 308 -TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSR 348
             ++  + + E+A                     I+K  +S+
Sbjct: 286 NELIKIQAKYEEAYKIVDSVTKSGAQKAKEICAPITKKILSK 327


>gi|229047013|ref|ZP_04192638.1| Tryptophanyl-tRNA synthetase [Bacillus cereus AH676]
 gi|228724336|gb|EEL75668.1| Tryptophanyl-tRNA synthetase [Bacillus cereus AH676]
          Length = 345

 Score = 41.7 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 22/96 (22%), Positives = 33/96 (34%), Gaps = 17/96 (17%)

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLF 222
           L+ +  ++   + Y IL A D + L +     +   G DQ  +I    D+         F
Sbjct: 136 LEVDAGVNMGLYTYPILMAADIL-LFQATHVPV---GKDQIQHIEIARDIATYFN--HTF 189

Query: 223 ALTSPL-----------LTTASGTKMGKTLSGAIWL 247
             T  L           L    G KM K+    I L
Sbjct: 190 GTTFTLPEYVVQEEGAILPGLDGRKMSKSYGNVIPL 225


>gi|224283990|ref|ZP_03647312.1| Tryptophanyl-tRNA synthetase [Bifidobacterium bifidum NCIMB 41171]
 gi|311063498|ref|YP_003970223.1| TrpS Tryptophanyl-tRNA synthetase [Bifidobacterium bifidum PRL2010]
 gi|313141141|ref|ZP_07803334.1| tryptophanyl-tRNA synthetase [Bifidobacterium bifidum NCIMB 41171]
 gi|310865817|gb|ADP35186.1| TrpS Tryptophanyl-tRNA synthetase [Bifidobacterium bifidum PRL2010]
 gi|313133651|gb|EFR51268.1| tryptophanyl-tRNA synthetase [Bifidobacterium bifidum NCIMB 41171]
          Length = 365

 Score = 41.7 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 35/256 (13%), Positives = 73/256 (28%), Gaps = 42/256 (16%)

Query: 22  SNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSI 80
           S+     +    G  T   G   T   LH GH    +     +Q  G     ++      
Sbjct: 27  SDATLAKLEAEPGKFTMLTGDRPTGR-LHLGHYFGSIKERVAMQNRGVNTNIIIADY--- 82

Query: 81  IGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY----GTGKTDALMLNNETWLCSIK 136
                      +++  ++  E+I+    + +  + Y           +  ++     +  
Sbjct: 83  -----------QVITDRDTTEHIQ--DNVLNLVLDYMAAGIDPTKTMMFTHSAVPAENQL 129

Query: 137 YIDLLREIGSFFSVNRMLSFESVRSRLK-REQSLSFLEFNYMILQAYDFVELAKNYDCRL 195
            +  L  +             +V+S ++    +L+ L   Y + QA D   L    +   
Sbjct: 130 LLPFLSLVTEAELHRNP----TVKSEMEASGHALTGLLLTYPVHQACD--ILFCKANVV- 182

Query: 196 QMGGSDQWGNIICGIDLGERLKT----------PKLFALTS-PLLTTASGTKMGKTLSGA 244
              G D   ++     +  R                  L+  P +    G KM K+   +
Sbjct: 183 -PIGKDNLPHVEITRTIARRFNERYAKKNPVFPEPAAILSDAPEIPGLDGRKMSKSYGNS 241

Query: 245 IWLNKEMTSPYNFWQY 260
           I L           + 
Sbjct: 242 IMLGATAEETAKLIKK 257


>gi|186685337|ref|YP_001868533.1| hemolysin A [Nostoc punctiforme PCC 73102]
 gi|186467789|gb|ACC83590.1| hemolysin A [Nostoc punctiforme PCC 73102]
          Length = 272

 Score = 41.7 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 7/41 (17%), Positives = 21/41 (51%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
           TL+V+    +S   A+R +++  + +N  ++     ++ + 
Sbjct: 8   TLLVELNLCSSRALAQRLIQAGEVTVNQQLVDKPGTEVDIS 48


>gi|304388352|ref|ZP_07370465.1| S4 RNA-binding domain protein [Neisseria meningitidis ATCC 13091]
 gi|304337669|gb|EFM03825.1| S4 RNA-binding domain protein [Neisseria meningitidis ATCC 13091]
          Length = 118

 Score = 41.7 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 10/53 (18%), Positives = 22/53 (41%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
           E +  + L  L+  AG A S  +A+  +    +  N    + +  +I+  +  
Sbjct: 49  EDNEYIALCDLLKLAGLAESGGQAKALIAEGLVSRNGETETRKTAKIRGGEVI 101


>gi|228922068|ref|ZP_04085379.1| hypothetical protein bthur0011_30600 [Bacillus thuringiensis
           serovar huazhongensis BGSC 4BD1]
 gi|228837676|gb|EEM83006.1| hypothetical protein bthur0011_30600 [Bacillus thuringiensis
           serovar huazhongensis BGSC 4BD1]
          Length = 332

 Score = 41.7 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 22/96 (22%), Positives = 33/96 (34%), Gaps = 17/96 (17%)

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLF 222
           L+ +  ++   + Y IL A D + L +     +   G DQ  +I    D+         F
Sbjct: 123 LEVDAGVNMGLYTYPILMAADIL-LFQATHVPV---GKDQIQHIEIARDIATYFN--HTF 176

Query: 223 ALTSPL-----------LTTASGTKMGKTLSGAIWL 247
             T  L           L    G KM K+    I L
Sbjct: 177 GTTFTLPEYVIQEEGAILPGLDGRKMSKSYGNVIPL 212


>gi|330964035|gb|EGH64295.1| tryptophanyl-tRNA synthetase [Pseudomonas syringae pv. actinidiae
           str. M302091]
          Length = 449

 Score = 41.7 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 18/94 (19%), Positives = 36/94 (38%), Gaps = 16/94 (17%)

Query: 166 EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-----TPK 220
           +  ++   ++Y +L A D + +   +   +   G DQ  ++    D+G+R         +
Sbjct: 126 DAGITMGLYSYPVLMAADIL-MFNAHQVPV---GRDQIQHVEMARDIGQRFNHLFGKGKE 181

Query: 221 LFAL-------TSPLLTTASGTKMGKTLSGAIWL 247
            F +       +   L    G KM K+    I L
Sbjct: 182 FFVMPEALIEESVATLPGLDGRKMSKSYDNTIPL 215


>gi|330938012|gb|EGH41792.1| tryptophanyl-tRNA synthetase [Pseudomonas syringae pv. pisi str.
           1704B]
          Length = 449

 Score = 41.7 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 18/94 (19%), Positives = 36/94 (38%), Gaps = 16/94 (17%)

Query: 166 EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-----TPK 220
           +  ++   ++Y +L A D + +   +   +   G DQ  ++    D+G+R         +
Sbjct: 126 DAGITMGLYSYPVLMAADIL-MFNAHQVPV---GRDQIQHVEMARDIGQRFNHLFGNGKE 181

Query: 221 LFAL-------TSPLLTTASGTKMGKTLSGAIWL 247
            F +       +   L    G KM K+    I L
Sbjct: 182 FFVMPEALIEESVATLPGLDGRKMSKSYDNTIPL 215


>gi|329943300|ref|ZP_08292074.1| tryptophanyl-tRNA synthetase [Chlamydophila psittaci Cal10]
 gi|332287877|ref|YP_004422778.1| tryptophanyl-tRNA synthetase [Chlamydophila psittaci 6BC]
 gi|313848449|emb|CBY17453.1| putative tryptophanyl-tRNA synthetase [Chlamydophila psittaci RD1]
 gi|325507319|gb|ADZ18957.1| tryptophanyl-tRNA synthetase [Chlamydophila psittaci 6BC]
 gi|328814847|gb|EGF84837.1| tryptophanyl-tRNA synthetase [Chlamydophila psittaci Cal10]
 gi|328915139|gb|AEB55972.1| tryptophanyl-tRNA synthetase [Chlamydophila psittaci 6BC]
          Length = 345

 Score = 41.7 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 40/235 (17%), Positives = 80/235 (34%), Gaps = 37/235 (15%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTG--HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +      +    +    ++    ++         +R  +R +++ +
Sbjct: 13  PTGK-LHLGHWVGSIKNRLDLQNNPAYDCFFIVADLHTL--------TTR--VRKEQVLD 61

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLS----FE 157
               I  + + ++  G     + +         I  + LL       S+NR++      E
Sbjct: 62  VDNHIYEVLADWLSVGIDPNKSTIYLQSAIP-EIYELHLL--FSMLISINRIMGIPSLKE 118

Query: 158 SVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK 217
             ++    E  LS     Y +LQ+ D + LAK     +   G D   +I    D+     
Sbjct: 119 MAKNASIEEGGLSLGLVGYPVLQSADIL-LAKAQLVPV---GKDNEAHIELTRDIARNFN 174

Query: 218 TPKLFALTSP----------LLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYW 261
              L+    P           L    G  KM K+ + AI+L+ +  +  +  +  
Sbjct: 175 R--LYGEIFPEPETLQGELTSLVGIDGQGKMSKSANNAIYLSDDDATIKDKIRKM 227


>gi|237799269|ref|ZP_04587730.1| tryptophanyl-tRNA synthetase [Pseudomonas syringae pv. oryzae str.
           1_6]
 gi|237806238|ref|ZP_04592942.1| tryptophanyl-tRNA synthetase [Pseudomonas syringae pv. oryzae str.
           1_6]
 gi|331022125|gb|EGI02182.1| tryptophanyl-tRNA synthetase [Pseudomonas syringae pv. oryzae str.
           1_6]
 gi|331027352|gb|EGI07407.1| tryptophanyl-tRNA synthetase [Pseudomonas syringae pv. oryzae str.
           1_6]
          Length = 449

 Score = 41.7 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 18/94 (19%), Positives = 36/94 (38%), Gaps = 16/94 (17%)

Query: 166 EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-----TPK 220
           +  ++   ++Y +L A D + +   +   +   G DQ  ++    D+G+R         +
Sbjct: 126 DAGITMGLYSYPVLMAADIL-MFNAHQVPV---GRDQIQHVEMARDIGQRFNHLFGNGKE 181

Query: 221 LFAL-------TSPLLTTASGTKMGKTLSGAIWL 247
            F +       +   L    G KM K+    I L
Sbjct: 182 FFVMPEALIEESVATLPGLDGRKMSKSYDNTIPL 215


>gi|229080562|ref|ZP_04213083.1| hypothetical protein bcere0023_32060 [Bacillus cereus Rock4-2]
 gi|228702864|gb|EEL55329.1| hypothetical protein bcere0023_32060 [Bacillus cereus Rock4-2]
          Length = 345

 Score = 41.7 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 22/96 (22%), Positives = 33/96 (34%), Gaps = 17/96 (17%)

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLF 222
           L+ +  ++   + Y IL A D + L +     +   G DQ  +I    D+         F
Sbjct: 136 LEVDAGVNMGLYTYPILMAADIL-LFQATHVPV---GKDQIQHIEIARDIATYFN--HTF 189

Query: 223 ALTSPL-----------LTTASGTKMGKTLSGAIWL 247
             T  L           L    G KM K+    I L
Sbjct: 190 GTTFTLPEYVIQEEGAILPGLDGRKMSKSYGNVIPL 225


>gi|218289979|ref|ZP_03494156.1| ribosomal protein S4 [Alicyclobacillus acidocaldarius LAA1]
 gi|218239964|gb|EED07151.1| ribosomal protein S4 [Alicyclobacillus acidocaldarius LAA1]
          Length = 208

 Score = 41.7 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 16/61 (26%), Positives = 25/61 (40%), Gaps = 8/61 (13%)

Query: 349 GMGLLTLI--------VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG 400
           G  LL L+         + GFA S  EAR+ ++   I++N   +      +K  D  S  
Sbjct: 89  GETLLQLLESRLDNVVYRLGFAASRAEARQLVRHGHIQVNGRRVDIPSFLVKEGDVVSVR 148

Query: 401 N 401
            
Sbjct: 149 E 149


>gi|114327123|ref|YP_744280.1| ribosomal large subunit pseudouridine synthase B [Granulibacter
           bethesdensis CGDNIH1]
 gi|114315297|gb|ABI61357.1| ribosomal large subunit pseudouridine synthase B [Granulibacter
           bethesdensis CGDNIH1]
          Length = 251

 Score = 41.7 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 9/58 (15%), Positives = 26/58 (44%), Gaps = 1/58 (1%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
            RG  +   + +AG   S  +A + ++   +++NN ++++    +   D  +     +
Sbjct: 14  PRGERIAKWLARAG-VASRRDAEKLVEDGRVRLNNQVVTHPATFVGSGDLVTVNGALV 70


>gi|39934240|ref|NP_946516.1| pseudouridine synthase Rsu [Rhodopseudomonas palustris CGA009]
 gi|39648088|emb|CAE26608.1| Pseudouridine synthase, Rsu:RNA-binding S4:Pseudouridine synthase
           [Rhodopseudomonas palustris CGA009]
          Length = 731

 Score = 41.7 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 10/56 (17%), Positives = 21/56 (37%), Gaps = 1/56 (1%)

Query: 342 SKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
                  G  +  ++ +AG   S  +A   +    + +N  +I +  L +K  D  
Sbjct: 397 PAKSDKAGERIAKVVARAGLC-SRRDAEAWITEGRVTVNGKVIDSPALDVKASDII 451


>gi|285017365|ref|YP_003375076.1| pseudouridylate synthase [Xanthomonas albilineans GPE PC73]
 gi|283472583|emb|CBA15088.1| probable pseudouridylate synthase protein [Xanthomonas albilineans]
          Length = 275

 Score = 41.7 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 11/61 (18%), Positives = 26/61 (42%), Gaps = 5/61 (8%)

Query: 331 IHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQ 390
              + +P +++         GL   + K G   S  EA R + +  + ++  I+++ +  
Sbjct: 17  TSKEALPAVAVGGPR----HGLARTLSKLGLC-SRTEAVRWIAAGRVAVDGRIVTDPEFP 71

Query: 391 I 391
           I
Sbjct: 72  I 72


>gi|295688343|ref|YP_003592036.1| RNA-binding S4 domain-containing protein [Caulobacter segnis ATCC
           21756]
 gi|295430246|gb|ADG09418.1| RNA-binding S4 domain protein [Caulobacter segnis ATCC 21756]
          Length = 256

 Score = 41.7 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 6/50 (12%), Positives = 21/50 (42%), Gaps = 1/50 (2%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
           + +    +   + ++G   S  EA + +    + I+  ++ +   +I+  
Sbjct: 8   DEAEPQRVNKWLAQSGVC-SRREAEQLISDGLVSIDGEVVEDVGRKIQPG 56


>gi|229128622|ref|ZP_04257600.1| Tryptophanyl-tRNA synthetase [Bacillus cereus BDRD-Cer4]
 gi|228654815|gb|EEL10675.1| Tryptophanyl-tRNA synthetase [Bacillus cereus BDRD-Cer4]
          Length = 345

 Score = 41.7 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 22/96 (22%), Positives = 33/96 (34%), Gaps = 17/96 (17%)

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLF 222
           L+ +  ++   + Y IL A D + L +     +   G DQ  +I    D+         F
Sbjct: 136 LEVDAGVNMGLYTYPILMAADIL-LFQATHVPV---GKDQIQHIEIARDIATYFN--HTF 189

Query: 223 ALTSPL-----------LTTASGTKMGKTLSGAIWL 247
             T  L           L    G KM K+    I L
Sbjct: 190 GTTFTLPEYVVQEEGAILPGLDGRKMSKSYGNVIPL 225


>gi|258512643|ref|YP_003186077.1| 30S ribosomal protein S4 [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
 gi|257479369|gb|ACV59688.1| ribosomal protein S4 [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
          Length = 208

 Score = 41.7 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 16/61 (26%), Positives = 25/61 (40%), Gaps = 8/61 (13%)

Query: 349 GMGLLTLI--------VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG 400
           G  LL L+         + GFA S  EAR+ ++   I++N   +      +K  D  S  
Sbjct: 89  GETLLQLLESRLDNVVYRLGFAASRAEARQLVRHGHIQVNGRRVDIPSFLVKEGDVVSVR 148

Query: 401 N 401
            
Sbjct: 149 E 149


>gi|66047350|ref|YP_237191.1| tryptophanyl-tRNA synthetase [Pseudomonas syringae pv. syringae
           B728a]
 gi|63258057|gb|AAY39153.1| Tryptophan--tRNA ligase [Pseudomonas syringae pv. syringae B728a]
          Length = 449

 Score = 41.7 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 18/94 (19%), Positives = 36/94 (38%), Gaps = 16/94 (17%)

Query: 166 EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-----TPK 220
           +  ++   ++Y +L A D + +   +   +   G DQ  ++    D+G+R         +
Sbjct: 126 DAGITMGLYSYPVLMAADIL-MFNAHQVPV---GRDQIQHVEMARDIGQRFNHLFGNGKE 181

Query: 221 LFAL-------TSPLLTTASGTKMGKTLSGAIWL 247
            F +       +   L    G KM K+    I L
Sbjct: 182 FFVMPEALIEESVATLPGLDGRKMSKSYDNTIPL 215


>gi|322821704|gb|EFZ27958.1| tryptophanyl-tRNA synthetase, putative [Trypanosoma cruzi]
          Length = 389

 Score = 41.7 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 21/106 (19%), Positives = 36/106 (33%), Gaps = 3/106 (2%)

Query: 15  RGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +   L  +   G     Y G   ++ S+H GHL   +   WLQ     P+ +
Sbjct: 51  RGIFFSHRDMNLLLDVYESGQPFYLYTGRGPSSESMHMGHLIPFIFTKWLQDAFKVPLVI 110

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFI--KYG 117
                      +   E    M ++ I++ I        +FI   + 
Sbjct: 111 QMTDDEKFFFRNIDMEQIEKMTTENIKDIIAMGFDPELTFIFRDFD 156


>gi|308471010|ref|XP_003097737.1| hypothetical protein CRE_14235 [Caenorhabditis remanei]
 gi|308239855|gb|EFO83807.1| hypothetical protein CRE_14235 [Caenorhabditis remanei]
          Length = 718

 Score = 41.7 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 50/295 (16%), Positives = 95/295 (32%), Gaps = 33/295 (11%)

Query: 1   MPAFKSDFLSILSE-----RGFI----HQISNPRELDILCS--QGVVTAYIGYDLTASSL 49
           M   ++  +  +SE     R  I     +     +L         V   Y G   T    
Sbjct: 1   MSGKEAPKVEEISEKTKETRDLILRNLQESLGVDKLTKQLETDGKVAHVYWGTATTGKP- 59

Query: 50  HAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGD--PSFRDESRRMMRSQEIQENIEKIK 107
           H G+L  +  +    + G K   L     + + +   S+     R++  + + + + +  
Sbjct: 60  HVGYLVPMRKIADFLQAGLKVTILFADLHAYLDNMKSSWELLKSRVVYYECVIKALLQSL 119

Query: 108 GIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ 167
            +    + +  G            L      D+LR        + + +   V  ++    
Sbjct: 120 DVPIEQLYFKKGTEYQ--------LSREYTDDVLRLSAQVSQRDALKAGAEVVKQVSSPL 171

Query: 168 SLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSP 227
               L     +LQA D   L        Q GG DQ    I   +   +LK  K + L +P
Sbjct: 172 LSGLLY---PLLQALDEQYLK----VDGQFGGVDQRKIFILAEEQLPKLKLGKRWHLMNP 224

Query: 228 LLTTASGTKMGKTLSGA---IWLNKEMTSPYNFWQYW-RNIDDADVVSFAKRLTT 278
           ++   +GTKM  +   +   +    +            R+  D  V+SF   +  
Sbjct: 225 MVPGLTGTKMSSSEEDSKIDVLDEPDRVRTKIMGAACSRDQPDNGVLSFYNFVLF 279


>gi|289677674|ref|ZP_06498564.1| tryptophanyl-tRNA synthetase [Pseudomonas syringae pv. syringae
           FF5]
          Length = 449

 Score = 41.7 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 18/94 (19%), Positives = 36/94 (38%), Gaps = 16/94 (17%)

Query: 166 EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-----TPK 220
           +  ++   ++Y +L A D + +   +   +   G DQ  ++    D+G+R         +
Sbjct: 126 DAGITMGLYSYPVLMAADIL-MFNAHQVPV---GRDQIQHVEMARDIGQRFNHLFGNGKE 181

Query: 221 LFAL-------TSPLLTTASGTKMGKTLSGAIWL 247
            F +       +   L    G KM K+    I L
Sbjct: 182 FFVMPEALIEESVATLPGLDGRKMSKSYDNTIPL 215


>gi|212540452|ref|XP_002150381.1| tryptophanyl-tRNA synthetase [Penicillium marneffei ATCC 18224]
 gi|210067680|gb|EEA21772.1| tryptophanyl-tRNA synthetase [Penicillium marneffei ATCC 18224]
          Length = 313

 Score = 41.7 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 14/60 (23%), Positives = 22/60 (36%), Gaps = 1/60 (1%)

Query: 15  RGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +  + LD   +      Y G   ++ +LH GH        WLQ     P+ +
Sbjct: 81  RGLFFSHRDFDKILDRYEAGEPFFMYTGRGPSSDALHLGHTIPFSFTKWLQDVFDVPLVI 140


>gi|149183615|ref|ZP_01862034.1| tryptophanyl-tRNA synthetase [Bacillus sp. SG-1]
 gi|148848679|gb|EDL62910.1| tryptophanyl-tRNA synthetase [Bacillus sp. SG-1]
          Length = 331

 Score = 41.7 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 30/233 (12%), Positives = 73/233 (31%), Gaps = 40/233 (17%)

Query: 34  GVVTAYIGYDLTASSLHAGHLTQLML--LFWLQKTGHKPISLMGGGTSIIGDPSFRDESR 91
              TA  G   T    H G+    +   L   + +  + I  +    +            
Sbjct: 2   ERPTALTGIKPTGHP-HLGNYIGAIKPALQMAKDSNSQGIYFIADYHA------------ 48

Query: 92  RMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVN 151
            +   Q+ ++  E    I ++++  G      +           + ++L   +       
Sbjct: 49  -LNSVQDRKQFKEYTYEIAAAWLSLGLDPEKVIFYKQSD---VPEILELHWILSCMTPKG 104

Query: 152 RMLSFESVRSRLKREQ--------SLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQW 203
            M    + +++++            ++   + Y IL A D +    +   ++ +G  DQ 
Sbjct: 105 LMNRAHAYKAKVEENNQEGNDPDAGVNMGLYTYPILMAADILLFNSD---KVPVG-KDQV 160

Query: 204 GNIICGIDLGERLKTP-------KLFALT--SPLLTTASGTKMGKTLSGAIWL 247
            ++    D+ E              + +   + ++    G KM K+    I L
Sbjct: 161 QHVEIARDIAENFNRTFGEAIKLPQYVIEEETAVIPGLDGRKMSKSYGNTIPL 213


>gi|156096242|ref|XP_001614155.1| tryptophan--tRNA ligase [Plasmodium vivax SaI-1]
 gi|148803029|gb|EDL44428.1| tryptophan--tRNA ligase, putative [Plasmodium vivax]
          Length = 645

 Score = 41.7 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 59/372 (15%), Positives = 110/372 (29%), Gaps = 81/372 (21%)

Query: 25  RELDILCS----QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSI 80
           R+LD L +          Y G   ++ S+H GHL       +LQ   + P+ +       
Sbjct: 289 RDLDFLLNSYEQHKCFYIYTGRGPSSLSMHLGHLIPFYFCKYLQDAFNVPLVI------- 341

Query: 81  IGDPSFRDESRRMMRSQEIQENIEKIKG-IFSSFIKYGTGKTDALMLNNETWLCSIKYID 139
                  D+ + +       E I  +        I  G       +  N        Y  
Sbjct: 342 ----QMSDDEKFLFNQNYSLEYINTLTKENVKDIIAVGLNPELTFIFKNTQ-YAGYLYPT 396

Query: 140 LLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ-AYDFVE-----LAKNYDC 193
           +L  I    ++N+ ++            S +  + +Y   Q A  F +     L  N  C
Sbjct: 397 VL-SIHKKTTLNQSMNVFGF------NHSDNIGKISYPSFQIAPCFSQCFPQFLPPNIPC 449

Query: 194 RLQMGGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTASGTKMG------------ 238
            +  G  DQ        D+  ++   K   + ++  P L   + TKM             
Sbjct: 450 LVPQG-IDQDPYFRLSRDIAVKMALHKPVVVHSVFMPGLQGVN-TKMSSTKKKDEKGKDA 507

Query: 239 ---------------KTLSGAIWL-------NKEMTSPYNFWQ----------YWRNIDD 266
                          K  + ++          K   + Y F               N++ 
Sbjct: 508 AGQNSTPKGTASNSAKEHNNSVIFLTDTPEQIKNKINKYAFSGGGATIEEHREKGGNLEK 567

Query: 267 ADVVSFAKRL--TTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAM 324
                + + L      + EI    +       E KKI+   +T ++   ++  +A T A 
Sbjct: 568 DISYQYLRYLMEDDEKLHEIGEKYRRGEMLSGELKKILIEVLTELIQKHQQRRQALTEAE 627

Query: 325 ECFDMSIHSQHM 336
             +    H   +
Sbjct: 628 IAYFFDAHKPGL 639


>gi|71405894|ref|XP_805528.1| tryptophanyl-tRNA synthetase [Trypanosoma cruzi strain CL Brener]
 gi|70868973|gb|EAN83677.1| tryptophanyl-tRNA synthetase, putative [Trypanosoma cruzi]
          Length = 389

 Score = 41.7 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 21/106 (19%), Positives = 36/106 (33%), Gaps = 3/106 (2%)

Query: 15  RGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +   L  +   G     Y G   ++ S+H GHL   +   WLQ     P+ +
Sbjct: 51  RGIFFSHRDMNLLLDVYESGQPFYLYTGRGPSSESMHMGHLIPFIFTKWLQDAFKVPLVI 110

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFI--KYG 117
                      +   E    M ++ I++ I        +FI   + 
Sbjct: 111 QMTDDEKFFFRNIDMEQIEKMTTENIKDIIAMGFDPELTFIFRDFD 156


>gi|330973410|gb|EGH73476.1| tryptophanyl-tRNA synthetase [Pseudomonas syringae pv. aceris str.
           M302273PT]
          Length = 449

 Score = 41.7 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 18/94 (19%), Positives = 36/94 (38%), Gaps = 16/94 (17%)

Query: 166 EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-----TPK 220
           +  ++   ++Y +L A D + +   +   +   G DQ  ++    D+G+R         +
Sbjct: 126 DAGITMGLYSYPVLMAADIL-MFNAHQVPV---GRDQIQHVEMARDIGQRFNHLFGNGKE 181

Query: 221 LFAL-------TSPLLTTASGTKMGKTLSGAIWL 247
            F +       +   L    G KM K+    I L
Sbjct: 182 FFVMPEALIEESVATLPGLDGRKMSKSYDNTIPL 215


>gi|302185290|ref|ZP_07261963.1| tryptophanyl-tRNA synthetase [Pseudomonas syringae pv. syringae
           642]
          Length = 449

 Score = 41.7 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 18/94 (19%), Positives = 36/94 (38%), Gaps = 16/94 (17%)

Query: 166 EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-----TPK 220
           +  ++   ++Y +L A D + +   +   +   G DQ  ++    D+G+R         +
Sbjct: 126 DAGITMGLYSYPVLMAADIL-MFNAHQVPV---GRDQIQHVEMARDIGQRFNHLFGNGKE 181

Query: 221 LFAL-------TSPLLTTASGTKMGKTLSGAIWL 247
            F +       +   L    G KM K+    I L
Sbjct: 182 FFVMPEALIEESVATLPGLDGRKMSKSYDNTIPL 215


>gi|302330163|gb|ADL20357.1| tryptophanyl-tRNA synthetase [Corynebacterium pseudotuberculosis
           1002]
          Length = 342

 Score = 41.7 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 38/248 (15%), Positives = 82/248 (33%), Gaps = 32/248 (12%)

Query: 34  GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRM 93
                  G   TA S H G+    +  +   + G+     +    +I  D   ++     
Sbjct: 8   KKQRVLSGIQPTADSYHLGNYLGALKQWIDLQDGYDAFYFIPDLHAITVDQDPKE----- 62

Query: 94  MRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRM 153
           +R + I    + +       +     K+   + ++      + +I  +  +  F   +RM
Sbjct: 63  LRQRTIAGAAQLLA------LGIDPEKSTLFVQSHVPEHAELGWI--MTCLTGFGEASRM 114

Query: 154 LS-FESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL 212
               +    R     S     F Y +L A D + L +     +   G DQ  ++     L
Sbjct: 115 TQFKDKSAKRGADRTSAGL--FTYPMLMAADIL-LYRPQLVPV---GEDQRQHLELTRTL 168

Query: 213 GERLKT--PKLFALTSPLLTTASGT---------KMGKTLSGAIWLNKEMTSPYNFWQYW 261
            ER  +   K + +   ++   +           KM K+ +    L   +  P    +  
Sbjct: 169 AERFNSRFKKTYVVPEGIIPEGAAKIYDLQDPTSKMSKSGTNPKGLINLLDEPKVSIKRI 228

Query: 262 RN-IDDAD 268
           ++ + D+D
Sbjct: 229 KSAVTDSD 236


>gi|229070798|ref|ZP_04204027.1| hypothetical protein bcere0025_29740 [Bacillus cereus F65185]
 gi|228712377|gb|EEL64323.1| hypothetical protein bcere0025_29740 [Bacillus cereus F65185]
          Length = 327

 Score = 41.7 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 22/96 (22%), Positives = 33/96 (34%), Gaps = 17/96 (17%)

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLF 222
           L+ +  ++   + Y IL A D + L +     +   G DQ  +I    D+         F
Sbjct: 118 LEVDAGVNMGLYTYPILMAADIL-LFQATHVPV---GKDQIQHIEIARDIATYFN--HTF 171

Query: 223 ALTSPL-----------LTTASGTKMGKTLSGAIWL 247
             T  L           L    G KM K+    I L
Sbjct: 172 GTTFTLPEYVIQEEGAILPGLDGRKMSKSYGNVIPL 207


>gi|257791069|ref|YP_003181675.1| tryptophanyl-tRNA synthetase [Eggerthella lenta DSM 2243]
 gi|317488210|ref|ZP_07946780.1| tryptophanyl-tRNA synthetase [Eggerthella sp. 1_3_56FAA]
 gi|325830783|ref|ZP_08164167.1| tryptophan--tRNA ligase [Eggerthella sp. HGA1]
 gi|257474966|gb|ACV55286.1| tryptophanyl-tRNA synthetase [Eggerthella lenta DSM 2243]
 gi|316912683|gb|EFV34222.1| tryptophanyl-tRNA synthetase [Eggerthella sp. 1_3_56FAA]
 gi|325487190|gb|EGC89633.1| tryptophan--tRNA ligase [Eggerthella sp. HGA1]
          Length = 348

 Score = 41.7 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 44/268 (16%), Positives = 86/268 (32%), Gaps = 42/268 (15%)

Query: 22  SNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSI 80
           S+    D+       T   G   T   LH GH    +     LQ  G     ++      
Sbjct: 13  SDEIRADLPIHPEKYTMLTGDRPTGR-LHMGHYFGTIRERVALQDMGITTRIIIADY--- 68

Query: 81  IGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG----TGKTDALMLNNETWLCSIK 136
                      +++  ++  E+I+    +++  + Y       +   +  ++     +  
Sbjct: 69  -----------QVITDRDTTEHIQ--DNVYNMVVDYLACGIDPEKTIIFTHSAVPALNQL 115

Query: 137 YIDLLREIGSFFSVNRMLSFESVRSRLK-REQSLSFLEFNYMILQAYDFVELAKNYDCRL 195
            +  L    S  +   +L   +V+S +     +L+ L   Y + QA D   L    +   
Sbjct: 116 MLPFL----SLVTEAELLRNPTVKSEMDASGHALTGLLLTYPVHQACD--ILFCKGNIV- 168

Query: 196 QMGGSDQWGNIICGIDLGERLKTPKLFALTSPL--------LTTASGTKMGKTLSGAIWL 247
              G DQ  +I     +  R           P         +    G KM K+   AI L
Sbjct: 169 -PVGKDQLPHIEQTRQVARRFNERYGHVFPEPEGVLNDAVEIPGLDGRKMSKSYGNAISL 227

Query: 248 NKEMTSPYNFWQYWRNIDDAD-VVSFAK 274
           +          +   +  DAD ++++ K
Sbjct: 228 SLTAEETAKLIKK--SKTDADRMITYDK 253


>gi|187478027|ref|YP_786051.1| hypothetical protein BAV1525 [Bordetella avium 197N]
 gi|115422613|emb|CAJ49138.1| conserved hypothetical protein [Bordetella avium 197N]
          Length = 77

 Score = 41.7 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 12/72 (16%), Positives = 29/72 (40%), Gaps = 2/72 (2%)

Query: 336 MPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           MP I     + S  + +  L+  +G   S    +  +    +++ N + + +  +I+   
Sbjct: 1   MPLIEFELAQGSPHIEINQLLKASGVCDSGGAGKALVAQGLVRVGNEVETRKTAKIRGGQ 60

Query: 396 FDSTGN--IKLS 405
             S G+  I + 
Sbjct: 61  IVSYGDTRIVVR 72


>gi|112490030|pdb|2AZX|A Chain A, Charged And Uncharged Trnas Adopt Distinct Conformations
           When Complexed With Human Tryptophanyl-Trna Synthetase
 gi|112490031|pdb|2AZX|B Chain B, Charged And Uncharged Trnas Adopt Distinct Conformations
           When Complexed With Human Tryptophanyl-Trna Synthetase
          Length = 477

 Score = 41.7 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 14/60 (23%), Positives = 25/60 (41%), Gaps = 1/60 (1%)

Query: 15  RGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +  + LD   ++     Y G   ++ + H GHL   +   WLQ   + P+ +
Sbjct: 134 RGIFFSHRDXNQVLDAYENKKPFYLYTGRGPSSEAXHVGHLIPFIFTKWLQDVFNVPLVI 193


>gi|228946983|ref|ZP_04109280.1| Tryptophanyl-tRNA synthetase [Bacillus thuringiensis serovar
           monterrey BGSC 4AJ1]
 gi|228812715|gb|EEM59039.1| Tryptophanyl-tRNA synthetase [Bacillus thuringiensis serovar
           monterrey BGSC 4AJ1]
          Length = 327

 Score = 41.7 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 22/96 (22%), Positives = 33/96 (34%), Gaps = 17/96 (17%)

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLF 222
           L+ +  ++   + Y IL A D + L +     +   G DQ  +I    D+         F
Sbjct: 118 LEVDAGVNMGLYTYPILMAADIL-LFQATHVPV---GKDQIQHIEIARDIATYFN--HTF 171

Query: 223 ALTSPL-----------LTTASGTKMGKTLSGAIWL 247
             T  L           L    G KM K+    I L
Sbjct: 172 GTTFTLPEYVIQEEGAILPGLDGRKMSKSYGNVIPL 207


>gi|229092312|ref|ZP_04223484.1| Tryptophanyl-tRNA synthetase [Bacillus cereus Rock3-42]
 gi|228691014|gb|EEL44781.1| Tryptophanyl-tRNA synthetase [Bacillus cereus Rock3-42]
          Length = 327

 Score = 41.7 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 22/96 (22%), Positives = 33/96 (34%), Gaps = 17/96 (17%)

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLF 222
           L+ +  ++   + Y IL A D + L +     +   G DQ  +I    D+         F
Sbjct: 118 LEVDAGVNMGLYTYPILMAADIL-LFQATHVPV---GKDQIQHIEIARDIATYFN--HTF 171

Query: 223 ALTSPL-----------LTTASGTKMGKTLSGAIWL 247
             T  L           L    G KM K+    I L
Sbjct: 172 GTTFTLPEYVIQEEGAILPGLDGRKMSKSYGNVIPL 207


>gi|188579638|ref|YP_001923083.1| tryptophanyl-tRNA synthetase [Methylobacterium populi BJ001]
 gi|179343136|gb|ACB78548.1| tryptophanyl-tRNA synthetase [Methylobacterium populi BJ001]
          Length = 353

 Score = 41.7 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 62/398 (15%), Positives = 121/398 (30%), Gaps = 92/398 (23%)

Query: 41  GYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTS--IIGDPSFRDESRRMMRSQ 97
           G   T + LH G+    +     +Q+   + +  +    +  +  DP       R + + 
Sbjct: 11  GVQPTGN-LHLGNYLGAIKRFVEMQERDAQCLYCVVDLHAITLWQDPQALKGQIREVTAA 69

Query: 98  EIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFE 157
            +   I+  + I  +  +       A + N                +     +NRM  F+
Sbjct: 70  FLAAGIDPKRSIVFNQSQVPQHAELAWIFN---------------CVARLGWLNRMTQFK 114

Query: 158 SVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK 217
               + +   S+   +  Y +L A D +   +     +   G DQ  ++    D+ ++  
Sbjct: 115 DKAGKDRENASIGLYD--YPVLMAADILA-YRATHVPV---GEDQKQHLELTRDIAQKFN 168

Query: 218 ------------TPKLFALTSPLLTTA--------SGT-KMGKTLSGAIWLNKEMTSPYN 256
                         + F LT PL+            GT KM K+             P  
Sbjct: 169 NDFAGSILAHGHGEQFFPLTEPLIGGPAARVMSLRDGTKKMSKS------------DPSE 216

Query: 257 FWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAK---KIIATEITTMVHGR 313
            +      DDAD +                      +++ +AK   + + +E   +  GR
Sbjct: 217 -YSRINLTDDADAI---------------------AQKVRKAKTDPEPLPSEAAGLA-GR 253

Query: 314 EEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLK 373
            EA+             I    +          S    L+ L V+   A    E +R + 
Sbjct: 254 PEADNLVGIFAAL--RGITRDEVLKDFGGAQFSSFKPALVDLAVEM-LAPIGAEMKRLVA 310

Query: 374 SNAIKINNSIISNEKL--QIKLQDFDSTGNIK--LSFG 407
             A  I+  +    +    I     D+  +I   +  G
Sbjct: 311 DPA-YIDTVLADGAERAGAIAAPTLDAVKDIVGFVRRG 347


>gi|150020759|ref|YP_001306113.1| RNA-binding S4 domain-containing protein [Thermosipho melanesiensis
           BI429]
 gi|149793280|gb|ABR30728.1| RNA-binding S4 domain protein [Thermosipho melanesiensis BI429]
          Length = 230

 Score = 41.7 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 1/47 (2%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
           M L   +  A    S  E +R +K   +KIN  II+N   ++K  D 
Sbjct: 1   MRLDKFLSNAK-VGSRKEVKRLIKFGIVKINGEIITNVDFKVKENDI 46


>gi|322787990|gb|EFZ13831.1| hypothetical protein SINV_07847 [Solenopsis invicta]
          Length = 375

 Score = 41.7 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 52/310 (16%), Positives = 101/310 (32%), Gaps = 64/310 (20%)

Query: 33  QGVVTAYIGYDLTASSLHAGHLTQLMLLFW--LQKTGHKPISLMGGG--TSIIGDPSFRD 88
           +     + G   T  S+H G+    +   W  LQ +G   +  +      ++  +P    
Sbjct: 33  KYPKRIFSGIQPTG-SVHLGNYFGAIR-RWVELQNSGEAVLCSIVDLHSITLPQNPQRLR 90

Query: 89  ESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFF 148
           E+  +M +  I   I+  + I     K                     + +L   + S  
Sbjct: 91  ENILLMTATLIACGIDVKRSILFQQSKV------------------PMHTELCWVLCSIT 132

Query: 149 SVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIIC 208
           ++ R+      + + +  +++    + Y +LQA D + LA +        G DQ  +I  
Sbjct: 133 TMARLAHLPQFKEKSESLKNVPLGLYIYPVLQAADIL-LATHVPV-----GQDQAQHIQL 186

Query: 209 GIDLGERLKTPKLFALTSPLL--TTASG------------TKMGKTLSGA---------- 244
             DL +       F  T P+     +               KM K+ + A          
Sbjct: 187 AQDLAQIFNR--QFGKTFPIPHTLISDNPSQRIKSLREPMKKMSKSHTNAKSRLDILDEP 244

Query: 245 -IWLNKEMTSPYNF-----WQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEA 298
            I L K   +  +F     ++  R     +++     LT     EI    +  G    + 
Sbjct: 245 DILLEKVKKAITDFTSEVTYEPERRPGVTNLIDIHSLLTGKTPEEI--CKEAVGLNTGQY 302

Query: 299 KKIIATEITT 308
           K ++A  I  
Sbjct: 303 KLVLADVIIE 312


>gi|304569705|ref|YP_010887.2| ribosomal large subunit pseudouridine synthase B [Desulfovibrio
           vulgaris str. Hildenborough]
 gi|311233922|gb|ADP86776.1| RNA-binding S4 domain protein [Desulfovibrio vulgaris RCH1]
          Length = 292

 Score = 41.7 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 15/73 (20%), Positives = 27/73 (36%), Gaps = 3/73 (4%)

Query: 337 PTISISKDEVSRG-MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI-KLQ 394
           P    S DEV  G   L   +  AG   S  +A   +    +++N  +++    ++    
Sbjct: 32  PQAGTSPDEVEDGGTRLNKALSGAGVC-SRRQADTLIAGGKVRVNGEVVTEMGRRVFPAT 90

Query: 395 DFDSTGNIKLSFG 407
           D        L+ G
Sbjct: 91  DRIEVEGRLLACG 103


>gi|330981241|gb|EGH79344.1| tryptophanyl-tRNA synthetase [Pseudomonas syringae pv. aptata str.
           DSM 50252]
          Length = 449

 Score = 41.7 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 18/94 (19%), Positives = 36/94 (38%), Gaps = 16/94 (17%)

Query: 166 EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-----TPK 220
           +  ++   ++Y +L A D + +   +   +   G DQ  ++    D+G+R         +
Sbjct: 126 DAGITMGLYSYPVLMAADIL-MFNAHQVPV---GRDQIQHVEMARDIGQRFNHLFGNGKE 181

Query: 221 LFAL-------TSPLLTTASGTKMGKTLSGAIWL 247
            F +       +   L    G KM K+    I L
Sbjct: 182 FFVMPEALIEESVATLPGLDGRKMSKSYDNTIPL 215


>gi|330888596|gb|EGH21257.1| tryptophanyl-tRNA synthetase [Pseudomonas syringae pv. mori str.
           301020]
          Length = 449

 Score = 41.7 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 18/94 (19%), Positives = 36/94 (38%), Gaps = 16/94 (17%)

Query: 166 EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-----TPK 220
           +  ++   ++Y +L A D + +   +   +   G DQ  ++    D+G+R         +
Sbjct: 126 DAGITMGLYSYPVLMAADIL-MFNAHQVPV---GRDQIQHVEMARDIGQRFNHLFGNGKE 181

Query: 221 LFAL-------TSPLLTTASGTKMGKTLSGAIWL 247
            F +       +   L    G KM K+    I L
Sbjct: 182 FFVMPEALIEESVATLPGLDGRKMSKSYDNTIPL 215


>gi|289624961|ref|ZP_06457915.1| tryptophanyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str.
           NCPPB3681]
 gi|289647019|ref|ZP_06478362.1| tryptophanyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str.
           2250]
 gi|330868694|gb|EGH03403.1| tryptophanyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str.
           0893_23]
          Length = 449

 Score = 41.7 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 18/94 (19%), Positives = 36/94 (38%), Gaps = 16/94 (17%)

Query: 166 EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-----TPK 220
           +  ++   ++Y +L A D + +   +   +   G DQ  ++    D+G+R         +
Sbjct: 126 DAGITMGLYSYPVLMAADIL-MFNAHQVPV---GRDQIQHVEMARDIGQRFNHLFGNGKE 181

Query: 221 LFAL-------TSPLLTTASGTKMGKTLSGAIWL 247
            F +       +   L    G KM K+    I L
Sbjct: 182 FFVMPEALIEESVATLPGLDGRKMSKSYDNTIPL 215


>gi|268680374|ref|YP_003304805.1| tryptophanyl-tRNA synthetase [Sulfurospirillum deleyianum DSM 6946]
 gi|268618405|gb|ACZ12770.1| tryptophanyl-tRNA synthetase [Sulfurospirillum deleyianum DSM 6946]
          Length = 321

 Score = 41.7 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 33/215 (15%), Positives = 59/215 (27%), Gaps = 32/215 (14%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   + + LH G+    +      +        +    ++             + +  I 
Sbjct: 6   GIQPSGA-LHIGNYFGAIKQMIDLQEKSDLFIFIANYHALTSLKDGEALKHNTLDAA-IN 63

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETW-LCSIKYIDLLREIGSFFSVNRMLSFESV 159
                I     +F      K    +     W L     + LL    S+         + V
Sbjct: 64  FLSLGIDHTKVTFWAQSDVKEVLELY----WILSGYTPMGLLERAHSY--------KDKV 111

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
              +    SL    F+Y +L A D +     YD  +   G DQ  ++    D+  +    
Sbjct: 112 AKGIAANHSL----FSYPVLMAADILL----YDSEVIPVGKDQIQHVEITRDIAIKFNND 163

Query: 220 KLFALTSP---------LLTTASGTKMGKTLSGAI 245
                  P          +    G KM K+    I
Sbjct: 164 FGDIFKVPEFKVDENVATVPGLDGAKMSKSYGNTI 198


>gi|229191450|ref|ZP_04318434.1| Tryptophanyl-tRNA synthetase [Bacillus cereus ATCC 10876]
 gi|228592025|gb|EEK49860.1| Tryptophanyl-tRNA synthetase [Bacillus cereus ATCC 10876]
          Length = 345

 Score = 41.7 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 22/96 (22%), Positives = 33/96 (34%), Gaps = 17/96 (17%)

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLF 222
           L+ +  ++   + Y IL A D + L +     +   G DQ  +I    D+         F
Sbjct: 136 LEVDAGVNMGLYTYPILMAADIL-LFQATHVPV---GKDQIQHIEIARDIATYFN--HTF 189

Query: 223 ALTSPL-----------LTTASGTKMGKTLSGAIWL 247
             T  L           L    G KM K+    I L
Sbjct: 190 GTTFTLPEYVIQEEGAILPGLDGRKMSKSYGNVIPL 225


>gi|29897002|gb|AAP10280.1| Tryptophanyl-tRNA synthetase [Bacillus cereus ATCC 14579]
          Length = 327

 Score = 41.7 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 22/96 (22%), Positives = 33/96 (34%), Gaps = 17/96 (17%)

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLF 222
           L+ +  ++   + Y IL A D + L +     +   G DQ  +I    D+         F
Sbjct: 118 LEVDAGVNMGLYTYPILMAADIL-LFQATHVPV---GKDQIQHIEIARDIATYFN--HTF 171

Query: 223 ALTSPL-----------LTTASGTKMGKTLSGAIWL 247
             T  L           L    G KM K+    I L
Sbjct: 172 GTTFTLPEYVVQEEGAILPGLDGRKMSKSYGNVIPL 207


>gi|40889610|pdb|1R6T|A Chain A, Crystal Structure Of Human Tryptophanyl-Trna Synthetase
 gi|40889611|pdb|1R6T|B Chain B, Crystal Structure Of Human Tryptophanyl-Trna Synthetase
          Length = 477

 Score = 41.7 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 14/60 (23%), Positives = 25/60 (41%), Gaps = 1/60 (1%)

Query: 15  RGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +  + LD   ++     Y G   ++ + H GHL   +   WLQ   + P+ +
Sbjct: 134 RGIFFSHRDXNQVLDAYENKKPFYLYTGRGPSSEAXHVGHLIPFIFTKWLQDVFNVPLVI 193


>gi|332982681|ref|YP_004464122.1| 30S ribosomal protein S4P [Mahella australiensis 50-1 BON]
 gi|332700359|gb|AEE97300.1| SSU ribosomal protein S4P [Mahella australiensis 50-1 BON]
          Length = 206

 Score = 41.7 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 14/60 (23%), Positives = 25/60 (41%), Gaps = 8/60 (13%)

Query: 349 GMGLLTLI--------VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG 400
           G  LL L+         + GFA S  +AR+ ++   I +N   ++     +K  D  +  
Sbjct: 88  GENLLQLLERRLDNTVYRIGFADSRAQARQLVRHGHITVNGRKVNIPSYSVKPGDIIAVK 147


>gi|289669277|ref|ZP_06490352.1| tryptophanyl-tRNA synthetase [Xanthomonas campestris pv. musacearum
           NCPPB4381]
          Length = 429

 Score = 41.7 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 21/96 (21%), Positives = 34/96 (35%), Gaps = 18/96 (18%)

Query: 164 KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFA 223
             +  ++   F Y +L A D +        ++ +G  DQ  +I    D  +R     ++ 
Sbjct: 124 DEDAGVTAGLFMYPVLMAADILIFNAQ---KVPVG-RDQIQHIEMARDFAQRFN--HVYG 177

Query: 224 ---LTSP---------LLTTASGTKMGKTLSGAIWL 247
               T P          L    G KM K+ S  I L
Sbjct: 178 REFFTLPEGVIDEQVSTLPGLDGRKMSKSYSNTIPL 213


>gi|289666395|ref|ZP_06487976.1| tryptophanyl-tRNA synthetase [Xanthomonas campestris pv. vasculorum
           NCPPB702]
          Length = 429

 Score = 41.7 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 21/96 (21%), Positives = 34/96 (35%), Gaps = 18/96 (18%)

Query: 164 KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFA 223
             +  ++   F Y +L A D +        ++ +G  DQ  +I    D  +R     ++ 
Sbjct: 124 DEDAGVTAGLFMYPVLMAADILIFNAQ---KVPVG-RDQIQHIEMARDFAQRFN--HVYG 177

Query: 224 ---LTSP---------LLTTASGTKMGKTLSGAIWL 247
               T P          L    G KM K+ S  I L
Sbjct: 178 REFFTLPEGVIDEQVSTLPGLDGRKMSKSYSNTIPL 213


>gi|254671590|emb|CBA09257.1| conserved hypothetical protein [Neisseria meningitidis alpha153]
          Length = 133

 Score = 41.7 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 10/53 (18%), Positives = 22/53 (41%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
           E +  + L  L+  AG A S  +A+  +    +  N    + +  +I+  +  
Sbjct: 64  EDNEYIALCDLLKLAGLAESGGQAKALIAEGLVSRNGETETRKTAKIRGGEVI 116


>gi|229496173|ref|ZP_04389893.1| tryptophan-tRNA ligase [Porphyromonas endodontalis ATCC 35406]
 gi|229316751|gb|EEN82664.1| tryptophan-tRNA ligase [Porphyromonas endodontalis ATCC 35406]
          Length = 331

 Score = 41.7 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 34/224 (15%), Positives = 69/224 (30%), Gaps = 36/224 (16%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   T + LH G+    +  F   +  +     +    S+   P   D            
Sbjct: 7   GIRPTGN-LHLGNYFGAVRGFLEMQHEYDCFFFIADWHSLTTHPHPGD------------ 53

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
             +     I + ++  G       +          + ++L   +     +  +    S +
Sbjct: 54  -IVRGANTILAEYLACGLDPNKVTIYRQSD---VPEVLELYLYLNMNAYLGELERTTSFK 109

Query: 161 SRLKREQS--LSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
            +  R+Q   ++     Y  L A D +    +   ++ +G  DQ  N+        R  T
Sbjct: 110 DK-ARQQPNNVNAGLLTYPSLMAADILI---HKAVKVPVG-KDQEQNMEMARRFARRFNT 164

Query: 219 PKL-----------FALTSPLLTTASGT-KMGKTLSGAIWLNKE 250
                         F   +  +    G+ KMGK+   AI+L  +
Sbjct: 165 IYQTEYFTEPASWHFGDKAIKIPGLDGSGKMGKSEGNAIYLIDD 208


>gi|229134202|ref|ZP_04263018.1| Tryptophanyl-tRNA synthetase [Bacillus cereus BDRD-ST196]
 gi|228649222|gb|EEL05241.1| Tryptophanyl-tRNA synthetase [Bacillus cereus BDRD-ST196]
          Length = 332

 Score = 41.7 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 35/185 (18%), Positives = 57/185 (30%), Gaps = 47/185 (25%)

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLF 222
           L+ +  ++   + Y IL A D + L +     +   G DQ  +I    D+         F
Sbjct: 123 LEIDAGVNMGLYTYPILMAADIL-LFQATHVPV---GKDQIQHIEIARDIATYFN--HTF 176

Query: 223 ALTSPL-----------LTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVS 271
             T  L           L    G KM K+    I L  E        +  R +       
Sbjct: 177 GTTFTLPEYVIQEEGAILPGLDGRKMSKSYGNVIPLFAEQ-------EKLRKL------- 222

Query: 272 FAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSI 331
             K  T   +              NE K++   E   M++    AE    +  E ++  I
Sbjct: 223 IFKIKTDSSL-------------PNEPKEL---ETLFMIYKEFAAEDEMQSMREKYETGI 266

Query: 332 HSQHM 336
               +
Sbjct: 267 GWGDV 271


>gi|229162236|ref|ZP_04290205.1| Tryptophanyl-tRNA synthetase [Bacillus cereus R309803]
 gi|228621286|gb|EEK78143.1| Tryptophanyl-tRNA synthetase [Bacillus cereus R309803]
          Length = 327

 Score = 41.7 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 22/96 (22%), Positives = 34/96 (35%), Gaps = 17/96 (17%)

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLF 222
           L+ +  ++   + Y IL A D + L +     +   G DQ  +I    D+         F
Sbjct: 118 LELDAGVNMGLYTYPILMAADIL-LFQATHVPV---GKDQIQHIEITRDIATYFN--HTF 171

Query: 223 ALTSPL-----------LTTASGTKMGKTLSGAIWL 247
            +T  L           L    G KM K+    I L
Sbjct: 172 GMTFTLPEYVIKEEGAILPGLDGRKMSKSYGNVIPL 207


>gi|71734448|ref|YP_276251.1| tryptophanyl-tRNA synthetase [Pseudomonas syringae pv. phaseolicola
           1448A]
 gi|71555001|gb|AAZ34212.1| tryptophanyl-tRNA synthetase [Pseudomonas syringae pv. phaseolicola
           1448A]
 gi|320322471|gb|EFW78564.1| tryptophanyl-tRNA synthetase [Pseudomonas syringae pv. glycinea
           str. B076]
 gi|320330060|gb|EFW86047.1| tryptophanyl-tRNA synthetase [Pseudomonas syringae pv. glycinea
           str. race 4]
          Length = 449

 Score = 41.7 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 18/94 (19%), Positives = 36/94 (38%), Gaps = 16/94 (17%)

Query: 166 EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-----TPK 220
           +  ++   ++Y +L A D + +   +   +   G DQ  ++    D+G+R         +
Sbjct: 126 DAGITMGLYSYPVLMAADIL-MFNAHQVPV---GRDQIQHVEMARDIGQRFNHLFGNGKE 181

Query: 221 LFAL-------TSPLLTTASGTKMGKTLSGAIWL 247
            F +       +   L    G KM K+    I L
Sbjct: 182 FFVMPEALIEESVATLPGLDGRKMSKSYDNTIPL 215


>gi|307193114|gb|EFN76031.1| Tryptophanyl-tRNA synthetase, mitochondrial [Harpegnathos saltator]
          Length = 302

 Score = 41.7 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 28/161 (17%), Positives = 52/161 (32%), Gaps = 31/161 (19%)

Query: 136 KYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRL 195
            + +L   +    ++ R+      + + +  +++    + Y ILQA D + L K  D  +
Sbjct: 44  MHAELCWVLACITTMARLAHLPQFKEKSESLKNVPLGLYIYPILQAADIL-LYKATDVPV 102

Query: 196 QMGGSDQWGNIICGIDLGERLKTPKLFALTSPL--LTTASG------------TKMGKTL 241
              G DQ  +I    DL         F +T P+  +  + G             KM K+ 
Sbjct: 103 ---GQDQAQHIQLAQDLARIFNKK--FGMTFPIPRVLVSDGPSQRIKSLRDPTKKMSKSH 157

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMS 282
                  +             +  D  +    K LT     
Sbjct: 158 QD----TRNRLD-------ILDNPDVLLEKVKKALTDFTSE 187


>gi|299531539|ref|ZP_07044945.1| tryptophanyl-tRNA synthetase [Comamonas testosteroni S44]
 gi|298720502|gb|EFI61453.1| tryptophanyl-tRNA synthetase [Comamonas testosteroni S44]
          Length = 433

 Score = 41.7 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 20/113 (17%), Positives = 36/113 (31%), Gaps = 24/113 (21%)

Query: 164 KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL----GERLKTP 219
           + +  ++   F Y +L   D +    N   ++ +G  DQ  ++    D+           
Sbjct: 125 EPDDGVTAGLFMYPVLMGADILIFNAN---KVPVG-RDQVQHLEMARDMASSFNHIYGGE 180

Query: 220 KLFALTSP---------LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
                T P          L    G KM K+ +  I L     +P    +   N
Sbjct: 181 ---YFTLPEAVVEESVATLPGLDGRKMSKSYNNTIPL----FAPREQLRKLIN 226


>gi|264676968|ref|YP_003276874.1| tryptophanyl-tRNA synthetase [Comamonas testosteroni CNB-2]
 gi|262207480|gb|ACY31578.1| tryptophanyl-tRNA synthetase [Comamonas testosteroni CNB-2]
          Length = 433

 Score = 41.7 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 20/113 (17%), Positives = 36/113 (31%), Gaps = 24/113 (21%)

Query: 164 KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL----GERLKTP 219
           + +  ++   F Y +L   D +    N   ++ +G  DQ  ++    D+           
Sbjct: 125 EPDDGVTAGLFMYPVLMGADILIFNAN---KVPVG-RDQVQHLEMARDMASSFNHIYGGE 180

Query: 220 KLFALTSP---------LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
                T P          L    G KM K+ +  I L     +P    +   N
Sbjct: 181 ---YFTLPEAVVEESVATLPGLDGRKMSKSYNNTIPL----FAPREQLRKLIN 226


>gi|148642276|ref|YP_001272789.1| tryptophanyl-tRNA synthetase [Methanobrevibacter smithii ATCC
           35061]
 gi|148551293|gb|ABQ86421.1| tryptophanyl-tRNA synthetase, TrpS [Methanobrevibacter smithii ATCC
           35061]
          Length = 325

 Score = 41.7 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 42/251 (16%), Positives = 86/251 (34%), Gaps = 35/251 (13%)

Query: 13  SERGFIHQISNPRELDILCSQGV-VTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
            +RG I    +  +++ L ++        G   +   +H GH   +  L W Q  G    
Sbjct: 1   MKRGVIFGHRDFDKVNNLINKKEDFAVVGGMMPSGQ-MHIGHKMVVDQLKWYQDKGAMLS 59

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            L+    S        +++R +          E +    +  +       +  +      
Sbjct: 60  ILIADLESYAARDMSFEKARDI-------AVNEYLTNYIALGLDLEEDNVNVYL------ 106

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF-VELAKN 190
                  D LR++   F  ++  +F  +++     QS +       ++Q  D  +   + 
Sbjct: 107 ---QSKNDTLRDLA--FKASKKTNFNELKAIYGFTQSTNIAHIQAPLVQVADILLPQLEE 161

Query: 191 YD----CRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSP------LLTTASGTKMGKT 240
           +       + +G  DQ  +I    D+  +L     +    P       LT  SG KM  +
Sbjct: 162 FGGPKRVVVPVG-VDQDPHIRLTRDIAHKLNDE--YGFIPPSSTYHRFLTGLSGDKMSSS 218

Query: 241 LSG-AIWLNKE 250
               AI+LN++
Sbjct: 219 KPSTAIYLNED 229


>gi|30263315|ref|NP_845692.1| tryptophanyl-tRNA synthetase [Bacillus anthracis str. Ames]
 gi|47778154|ref|YP_022640.1| tryptophanyl-tRNA synthetase [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|49186164|ref|YP_029416.1| tryptophanyl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|165869038|ref|ZP_02213698.1| putative tryptophanyl-tRNA synthetase [Bacillus anthracis str.
           A0488]
 gi|167632011|ref|ZP_02390338.1| putative tryptophanyl-tRNA synthetase [Bacillus anthracis str.
           A0442]
 gi|167637474|ref|ZP_02395754.1| putative tryptophanyl-tRNA synthetase [Bacillus anthracis str.
           A0193]
 gi|170684784|ref|ZP_02876009.1| putative tryptophanyl-tRNA synthetase [Bacillus anthracis str.
           A0465]
 gi|170705073|ref|ZP_02895538.1| putative tryptophanyl-tRNA synthetase [Bacillus anthracis str.
           A0389]
 gi|177650131|ref|ZP_02933132.1| putative tryptophanyl-tRNA synthetase [Bacillus anthracis str.
           A0174]
 gi|190564500|ref|ZP_03017421.1| putative tryptophanyl-tRNA synthetase [Bacillus anthracis
           Tsiankovskii-I]
 gi|227813815|ref|YP_002813824.1| putative tryptophanyl-tRNA synthetase [Bacillus anthracis str. CDC
           684]
 gi|229603093|ref|YP_002867572.1| putative tryptophanyl-tRNA synthetase [Bacillus anthracis str.
           A0248]
 gi|254685929|ref|ZP_05149788.1| tryptophanyl-tRNA synthetase [Bacillus anthracis str. CNEVA-9066]
 gi|254723332|ref|ZP_05185120.1| tryptophanyl-tRNA synthetase [Bacillus anthracis str. A1055]
 gi|254738399|ref|ZP_05196102.1| tryptophanyl-tRNA synthetase [Bacillus anthracis str. Western North
           America USA6153]
 gi|254742434|ref|ZP_05200119.1| tryptophanyl-tRNA synthetase [Bacillus anthracis str. Kruger B]
 gi|254752715|ref|ZP_05204751.1| tryptophanyl-tRNA synthetase [Bacillus anthracis str. Vollum]
 gi|30257949|gb|AAP27178.1| putative tryptophanyl-tRNA synthetase [Bacillus anthracis str.
           Ames]
 gi|47551859|gb|AAT35374.1| putative tryptophanyl-tRNA synthetase [Bacillus anthracis str.
           'Ames Ancestor']
 gi|49180091|gb|AAT55467.1| tryptophanyl-tRNA synthetase, putative [Bacillus anthracis str.
           Sterne]
 gi|164715764|gb|EDR21281.1| putative tryptophanyl-tRNA synthetase [Bacillus anthracis str.
           A0488]
 gi|167514981|gb|EDR90347.1| putative tryptophanyl-tRNA synthetase [Bacillus anthracis str.
           A0193]
 gi|167532309|gb|EDR94945.1| putative tryptophanyl-tRNA synthetase [Bacillus anthracis str.
           A0442]
 gi|170129928|gb|EDS98790.1| putative tryptophanyl-tRNA synthetase [Bacillus anthracis str.
           A0389]
 gi|170671044|gb|EDT21782.1| putative tryptophanyl-tRNA synthetase [Bacillus anthracis str.
           A0465]
 gi|172084083|gb|EDT69142.1| putative tryptophanyl-tRNA synthetase [Bacillus anthracis str.
           A0174]
 gi|190563817|gb|EDV17781.1| putative tryptophanyl-tRNA synthetase [Bacillus anthracis
           Tsiankovskii-I]
 gi|227003343|gb|ACP13086.1| putative tryptophanyl-tRNA synthetase [Bacillus anthracis str. CDC
           684]
 gi|229267501|gb|ACQ49138.1| putative tryptophanyl-tRNA synthetase [Bacillus anthracis str.
           A0248]
          Length = 332

 Score = 41.7 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 22/96 (22%), Positives = 33/96 (34%), Gaps = 17/96 (17%)

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLF 222
           L+ +  ++   + Y IL A D + L +     +   G DQ  +I    D+         F
Sbjct: 123 LEVDAGVNMGLYTYPILMAADIL-LFQATHVPV---GKDQIQHIEIARDIATYFN--HTF 176

Query: 223 ALTSPL-----------LTTASGTKMGKTLSGAIWL 247
             T  L           L    G KM K+    I L
Sbjct: 177 GTTFTLPEYVIQEEGAILPGLDGRKMSKSYGNVIPL 212


>gi|330895250|gb|EGH27588.1| tryptophanyl-tRNA synthetase [Pseudomonas syringae pv. japonica
           str. M301072PT]
          Length = 422

 Score = 41.7 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 18/94 (19%), Positives = 36/94 (38%), Gaps = 16/94 (17%)

Query: 166 EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-----TPK 220
           +  ++   ++Y +L A D + +   +   +   G DQ  ++    D+G+R         +
Sbjct: 126 DAGITMGLYSYPVLMAADIL-MFNAHQVPV---GRDQIQHVEMARDIGQRFNHLFGNGKE 181

Query: 221 LFAL-------TSPLLTTASGTKMGKTLSGAIWL 247
            F +       +   L    G KM K+    I L
Sbjct: 182 FFVMPEALIEESVATLPGLDGRKMSKSYDNTIPL 215


>gi|228915960|ref|ZP_04079535.1| Tryptophanyl-tRNA synthetase [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|228843778|gb|EEM88852.1| Tryptophanyl-tRNA synthetase [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
          Length = 327

 Score = 41.7 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 22/96 (22%), Positives = 33/96 (34%), Gaps = 17/96 (17%)

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLF 222
           L+ +  ++   + Y IL A D + L +     +   G DQ  +I    D+         F
Sbjct: 118 LEVDAGVNMGLYTYPILMAADIL-LFQATHVPV---GKDQIQHIEIARDIATYFN--HTF 171

Query: 223 ALTSPL-----------LTTASGTKMGKTLSGAIWL 247
             T  L           L    G KM K+    I L
Sbjct: 172 GTTFTLPEYVIQEEGAILPGLDGRKMSKSYGNVIPL 207


>gi|228928406|ref|ZP_04091447.1| Tryptophanyl-tRNA synthetase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228831453|gb|EEM77049.1| Tryptophanyl-tRNA synthetase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
          Length = 327

 Score = 41.7 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 22/96 (22%), Positives = 33/96 (34%), Gaps = 17/96 (17%)

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLF 222
           L+ +  ++   + Y IL A D + L +     +   G DQ  +I    D+         F
Sbjct: 118 LEVDAGVNMGLYTYPILMAADIL-LFQATHVPV---GKDQIQHIEIARDIATYFN--HTF 171

Query: 223 ALTSPL-----------LTTASGTKMGKTLSGAIWL 247
             T  L           L    G KM K+    I L
Sbjct: 172 GTTFTLPEYVIQEEGAILPGLDGRKMSKSYGNVIPL 207


>gi|229122888|ref|ZP_04252096.1| Tryptophanyl-tRNA synthetase [Bacillus cereus 95/8201]
 gi|228660472|gb|EEL16104.1| Tryptophanyl-tRNA synthetase [Bacillus cereus 95/8201]
          Length = 327

 Score = 41.7 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 22/96 (22%), Positives = 33/96 (34%), Gaps = 17/96 (17%)

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLF 222
           L+ +  ++   + Y IL A D + L +     +   G DQ  +I    D+         F
Sbjct: 118 LEVDAGVNMGLYTYPILMAADIL-LFQATHVPV---GKDQIQHIEIARDIATYFN--HTF 171

Query: 223 ALTSPL-----------LTTASGTKMGKTLSGAIWL 247
             T  L           L    G KM K+    I L
Sbjct: 172 GTTFTLPEYVIQEEGAILPGLDGRKMSKSYGNVIPL 207


>gi|157369649|ref|YP_001477638.1| tryptophanyl-tRNA synthetase II [Serratia proteamaculans 568]
 gi|157321413|gb|ABV40510.1| tryptophanyl-tRNA synthetase [Serratia proteamaculans 568]
          Length = 335

 Score = 41.7 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 35/221 (15%), Positives = 59/221 (26%), Gaps = 29/221 (13%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQE-IQEN 102
            T  SLH GH    +      +  H+   L+     +       D      +    +   
Sbjct: 11  PTG-SLHLGHYVGSLRQRVELQQHHQQTVLVADLQGL------TDNGNNPQKISTNVLNL 63

Query: 103 IEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR 162
           +     +          KT   + +    L  +    L     +    N  +  E +   
Sbjct: 64  VADYLAVG-----ICPQKTTICLQSALPALAELTMYYLNLVSVARLERNPTVKSEIMEKD 118

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK---TP 219
             R     FL   Y + QA D       +       G DQ   +    ++  R       
Sbjct: 119 FSRSLPAGFL--VYPVSQAADITA----FGATHVPVGDDQLPMLEQTNEIVRRFNHIVGR 172

Query: 220 KLFALTSPL------LTTASGT-KMGKTLSGAIWLNKEMTS 253
           ++     PL      L    G  KM K+    I L  +   
Sbjct: 173 QVLTECQPLLSHVSRLPGLDGQGKMSKSRGNTITLGADADR 213


>gi|86742642|ref|YP_483042.1| tryptophanyl-tRNA synthetase [Frankia sp. CcI3]
 gi|86569504|gb|ABD13313.1| tryptophanyl-tRNA synthetase [Frankia sp. CcI3]
          Length = 341

 Score = 41.7 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 21/95 (22%), Positives = 35/95 (36%), Gaps = 17/95 (17%)

Query: 166 EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKLFA 223
           +  ++   FNY IL A D + +  +    +   G DQ  ++    D+          +F+
Sbjct: 129 DAGINMGLFNYPILMAVDILIMNAD----VVPVGQDQSQHVEYAADIAGSFNHLFGDVFS 184

Query: 224 LTSP-----------LLTTASGTKMGKTLSGAIWL 247
           L  P           +L    G KM K+    I L
Sbjct: 185 LKIPEVVLPAGSSAKVLPGIDGRKMSKSYRNTIPL 219


>gi|54022803|ref|YP_117045.1| 30S ribosomal protein S4 [Nocardia farcinica IFM 10152]
 gi|61215422|sp|Q5Z1L0|RS4_NOCFA RecName: Full=30S ribosomal protein S4
 gi|54014311|dbj|BAD55681.1| putative ribosomal protein S4 [Nocardia farcinica IFM 10152]
          Length = 201

 Score = 41.7 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 18/111 (16%), Positives = 34/111 (30%), Gaps = 16/111 (14%)

Query: 311 HGR------EEAEKAATAAMECFDMSIHSQHMPTI--SISKDEVSRGMGLLTLI------ 356
           HGR      E   +        F   +  +         ++ +   G  LL L+      
Sbjct: 36  HGRARIKESEYLLQLQEKQKARFSYGVMEKQFRRYYEEANRQKGKTGDNLLRLLETRLDN 95

Query: 357 --VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLS 405
              +AG A +  +AR+ +      +N   +     ++   D        LS
Sbjct: 96  VVYRAGLARTRRQARQLVSHGHFLVNGVKVDVPSYRVSQYDIIDVKEKSLS 146


>gi|330875052|gb|EGH09201.1| tryptophanyl-tRNA synthetase [Pseudomonas syringae pv. glycinea
           str. race 4]
          Length = 446

 Score = 41.7 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 18/94 (19%), Positives = 36/94 (38%), Gaps = 16/94 (17%)

Query: 166 EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-----TPK 220
           +  ++   ++Y +L A D + +   +   +   G DQ  ++    D+G+R         +
Sbjct: 123 DAGITMGLYSYPVLMAADIL-MFNAHQVPV---GRDQIQHVEMARDIGQRFNHLFGNGKE 178

Query: 221 LFAL-------TSPLLTTASGTKMGKTLSGAIWL 247
            F +       +   L    G KM K+    I L
Sbjct: 179 FFVMPEALIEESVATLPGLDGRKMSKSYDNTIPL 212


>gi|319443750|pdb|3PRH|A Chain A, Tryptophanyl-Trna Synthetase Val144pro Mutant From B.
           Subtilis
 gi|319443751|pdb|3PRH|B Chain B, Tryptophanyl-Trna Synthetase Val144pro Mutant From B.
           Subtilis
          Length = 388

 Score = 41.7 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 48/298 (16%), Positives = 93/298 (31%), Gaps = 46/298 (15%)

Query: 35  VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMM 94
             T + G   +  S+  G+    M  F   +  +     +    + I  P  R E R+ +
Sbjct: 35  KQTIFSGIQPSG-SVTLGNYIGAMKQFVELQHDYNSYFCIVDQHA-ITVPQDRLELRKNI 92

Query: 95  RSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRML 154
           R+         +    ++          A       W+  ++ +  + E+       RM 
Sbjct: 93  RNLAALYLAVGLDPEKATLFIQSEVPAHAQ----AGWM--MQCVAYIGEL------ERMT 140

Query: 155 SFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
                + + K  +++      Y  L A D +     Y   L   G DQ  ++    +L E
Sbjct: 141 Q---FKDKSKGNEAVVSGLLTYPPLMAADILL----YGTDLVPPGEDQKQHLELTRNLAE 193

Query: 215 RLKTPKLFALTSPLLTTAS-G----------TKMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
           R         T P +     G           KM K+          +  P    +  ++
Sbjct: 194 RFNKKYNDIFTIPEVKIPKVGARIMSLNDPLKKMSKSDPNQKAYITLLDEPKQLEKKIKS 253

Query: 264 -IDDAD------------VVSFAKRLTTLPMSEIDR-MAKLQGKEINEAKKIIATEIT 307
            + D++            V +     + L  + I+   AK +GK   E K  +A  + 
Sbjct: 254 AVTDSEGIVKFDKENKPGVSNLLTIYSILGNTTIEELEAKYEGKGYGEFKGDLAEVVV 311


>gi|257483469|ref|ZP_05637510.1| tryptophanyl-tRNA synthetase [Pseudomonas syringae pv. tabaci ATCC
           11528]
 gi|298488514|ref|ZP_07006544.1| Tryptophanyl-tRNA synthetase [Pseudomonas savastanoi pv. savastanoi
           NCPPB 3335]
 gi|298156855|gb|EFH97945.1| Tryptophanyl-tRNA synthetase [Pseudomonas savastanoi pv. savastanoi
           NCPPB 3335]
 gi|330987113|gb|EGH85216.1| tryptophanyl-tRNA synthetase [Pseudomonas syringae pv. lachrymans
           str. M301315]
 gi|331011557|gb|EGH91613.1| tryptophanyl-tRNA synthetase [Pseudomonas syringae pv. tabaci ATCC
           11528]
          Length = 449

 Score = 41.7 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 18/94 (19%), Positives = 36/94 (38%), Gaps = 16/94 (17%)

Query: 166 EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-----TPK 220
           +  ++   ++Y +L A D + +   +   +   G DQ  ++    D+G+R         +
Sbjct: 126 DAGITMGLYSYPVLMAADIL-MFNAHQVPV---GRDQIQHVEMARDIGQRFNHLFGNGKE 181

Query: 221 LFAL-------TSPLLTTASGTKMGKTLSGAIWL 247
            F +       +   L    G KM K+    I L
Sbjct: 182 FFVMPEALIEESVATLPGLDGRKMSKSYDNTIPL 215


>gi|224025133|ref|ZP_03643499.1| hypothetical protein BACCOPRO_01867 [Bacteroides coprophilus DSM
           18228]
 gi|224018369|gb|EEF76367.1| hypothetical protein BACCOPRO_01867 [Bacteroides coprophilus DSM
           18228]
          Length = 253

 Score = 41.7 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 9/51 (17%), Positives = 22/51 (43%), Gaps = 1/51 (1%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           + +  + L   +  AG   S  EA   + +  + +N  +++    ++K  D
Sbjct: 13  DPNEPIRLNKFLANAGVC-SRREADEFITAGVVSVNGEVVTELGTKVKRTD 62


>gi|16125108|ref|NP_419672.1| RNA pseudouridylate synthase [Caulobacter crescentus CB15]
 gi|221233835|ref|YP_002516271.1| ribosomal large subunit pseudouridine synthase F [Caulobacter
           crescentus NA1000]
 gi|13422112|gb|AAK22840.1| RNA pseudouridylate synthase, putative [Caulobacter crescentus
           CB15]
 gi|220963007|gb|ACL94363.1| ribosomal large subunit pseudouridine synthase F [Caulobacter
           crescentus NA1000]
          Length = 255

 Score = 41.7 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 6/50 (12%), Positives = 21/50 (42%), Gaps = 1/50 (2%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
           + +    +   + ++G   S  EA + +    + I+  ++ +   +I+  
Sbjct: 8   DEAEPQRVNKWLAQSGVC-SRREAEQLISDGLVSIDGEVVEDVGRKIQPG 56


>gi|89893798|ref|YP_517285.1| hypothetical protein DSY1052 [Desulfitobacterium hafniense Y51]
 gi|219668173|ref|YP_002458608.1| tryptophanyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2]
 gi|89333246|dbj|BAE82841.1| hypothetical protein [Desulfitobacterium hafniense Y51]
 gi|219538433|gb|ACL20172.1| tryptophanyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2]
          Length = 331

 Score = 41.7 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 45/298 (15%), Positives = 87/298 (29%), Gaps = 53/298 (17%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGG---GTSIIGDPSFRDESRRMMRSQ 97
           G   + + +  G+    M  F   +  H+    +      T        R  SR +    
Sbjct: 7   GVQPSGT-ITLGNYLGAMKNFTSYQNEHECYFCIVNQHAITVPQEPEQLRKNSRNL---- 61

Query: 98  EIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFE 157
                           I     K    + +       + +I  +  + +   + RM  ++
Sbjct: 62  ----------AALYLAIGLDPDKVTLFIQSEVAEHTKLGWI--MTTLATIGELERMTQYK 109

Query: 158 SVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK 217
               R     S+      Y  L A D + L +     +   G DQ  +I    DL +R  
Sbjct: 110 DKAQRHGNGDSIPAGLLTYPPLMAADIL-LYQTDYVPV---GDDQRQHIEITRDLAQRFN 165

Query: 218 TPKLFALTSPLLTTAS-----------GTKMGKTLSGAIWLNKEMTSPYNFWQYW-RNID 265
           +    A   P + T               KM K+ + ++     +  P    +   R   
Sbjct: 166 SRYGEAFKLPAIHTREVGARIMSLQEPKKKMSKSDANSLATPYLLDEPETILKKIKRAQT 225

Query: 266 DADVVSFAK---------------RLTTLPMSEIDRMAKLQGKEINEAKKIIATEITT 308
           D++   +                  +T     EI+++   +GK   + K  +A  I  
Sbjct: 226 DSENKIYYDREGKAGISNLMAIYSLITDKSTDEIEQLY--EGKGYGQFKNDLAEAIIE 281


>gi|326384768|ref|ZP_08206445.1| hemolysin A [Gordonia neofelifaecis NRRL B-59395]
 gi|326196576|gb|EGD53773.1| hemolysin A [Gordonia neofelifaecis NRRL B-59395]
          Length = 300

 Score = 41.7 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 11/51 (21%), Positives = 24/51 (47%), Gaps = 8/51 (15%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIIS--------NEKLQIKLQDFDS 398
           +V+ G A S  +AR  +++ ++K+N +  +        +  L +   D D 
Sbjct: 11  LVRRGLARSREQARELIEAGSVKVNGTPATKASTNVAKDTPLVVAEADSDD 61


>gi|193214236|ref|YP_001995435.1| tryptophanyl-tRNA synthetase [Chloroherpeton thalassium ATCC 35110]
 gi|193087713|gb|ACF12988.1| tryptophanyl-tRNA synthetase [Chloroherpeton thalassium ATCC 35110]
          Length = 332

 Score = 41.7 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 20/83 (24%), Positives = 29/83 (34%), Gaps = 13/83 (15%)

Query: 174 FNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSP------ 227
           FNY +L A D +     +   +   G DQ  +I    D+ E         LT P      
Sbjct: 132 FNYPVLMASDILM----FGTNIVPVGLDQKQHIEIARDIAENFNNTFGDILTMPEGLIQE 187

Query: 228 ---LLTTASGTKMGKTLSGAIWL 247
               +    G KM K  +  + L
Sbjct: 188 DLMTIPGTDGRKMSKNYNNTLPL 210


>gi|161511205|ref|NP_833079.2| tryptophanyl-tRNA synthetase [Bacillus cereus ATCC 14579]
          Length = 332

 Score = 41.7 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 22/96 (22%), Positives = 33/96 (34%), Gaps = 17/96 (17%)

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLF 222
           L+ +  ++   + Y IL A D + L +     +   G DQ  +I    D+         F
Sbjct: 123 LEVDAGVNMGLYTYPILMAADIL-LFQATHVPV---GKDQIQHIEIARDIATYFN--HTF 176

Query: 223 ALTSPL-----------LTTASGTKMGKTLSGAIWL 247
             T  L           L    G KM K+    I L
Sbjct: 177 GTTFTLPEYVVQEEGAILPGLDGRKMSKSYGNVIPL 212


>gi|150402490|ref|YP_001329784.1| 30S ribosomal protein S4P [Methanococcus maripaludis C7]
 gi|171472890|sp|A6VGQ7|RS4_METM7 RecName: Full=30S ribosomal protein S4P
 gi|150033520|gb|ABR65633.1| ribosomal protein S4 [Methanococcus maripaludis C7]
          Length = 178

 Score = 41.7 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 20/164 (12%), Positives = 55/164 (33%), Gaps = 24/164 (14%)

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKI 301
               W+ + + S     Q +  ++  ++     +L                +      + 
Sbjct: 14  PNHPWIGERIQSEREISQKYGLVNKKELWKMETQL----------------RNYRRQARK 57

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGM---GLLTLIVK 358
           + ++ TT        ++A          +I  +  PT+          +    L T++ K
Sbjct: 58  LISDTTTQ-----GGKEAVQLFNVLKRYAILVEQEPTLDHVLSLNIESILERRLQTMVYK 112

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNI 402
            G A +  +AR+ +    I +N   +++    + + + D+   +
Sbjct: 113 KGLAKTAKQARQFIVHGHIAVNGKRVTSPSYLVSVAENDAIEYV 156


>gi|40889612|pdb|1R6U|A Chain A, Crystal Structure Of An Active Fragment Of Human
           Tryptophanyl-Trna Synthetase With Cytokine Activity
 gi|40889613|pdb|1R6U|B Chain B, Crystal Structure Of An Active Fragment Of Human
           Tryptophanyl-Trna Synthetase With Cytokine Activity
          Length = 437

 Score = 41.7 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 14/60 (23%), Positives = 25/60 (41%), Gaps = 1/60 (1%)

Query: 15  RGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +  + LD   ++     Y G   ++ + H GHL   +   WLQ   + P+ +
Sbjct: 87  RGIFFSHRDXNQVLDAYENKKPFYLYTGRGPSSEAXHVGHLIPFIFTKWLQDVFNVPLVI 146


>gi|326336148|ref|ZP_08202320.1| tryptophan--tRNA ligase [Capnocytophaga sp. oral taxon 338 str.
           F0234]
 gi|325691657|gb|EGD33624.1| tryptophan--tRNA ligase [Capnocytophaga sp. oral taxon 338 str.
           F0234]
          Length = 335

 Score = 41.7 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 34/208 (16%), Positives = 62/208 (29%), Gaps = 33/208 (15%)

Query: 50  HAGHLTQLML--LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIK 107
           H G+L   +L  L   +   +     +    S+           R    +     +    
Sbjct: 27  HLGNLLGAILPALQMAENPKNDSFFFIADLHSLTQIKDGALL--RQNTYEVAATWLSFGL 84

Query: 108 GIFS-SFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE 166
                +F +       A +     W               FF   R+    S + +  R 
Sbjct: 85  DYHRVTFYRQSDVPQTAELA----WYLEC-----------FFPYQRLTLAHSFKDKADRL 129

Query: 167 QSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE--RLKTPKLFAL 224
           + ++   F Y +L A D +     YD ++   G DQ  +I    D+      +  + F L
Sbjct: 130 EDVNTGLFTYPMLMAADILL----YDAQIVPVGKDQLQHIEFARDVAGRFNYQMGETFVL 185

Query: 225 TSP-------LLTTASGTKMGKTLSGAI 245
                     ++    G KM K+    I
Sbjct: 186 PKESVREDIMIIPGTDGEKMSKSRRNFI 213


>gi|319787863|ref|YP_004147338.1| pseudouridine synthase [Pseudoxanthomonas suwonensis 11-1]
 gi|317466375|gb|ADV28107.1| pseudouridine synthase [Pseudoxanthomonas suwonensis 11-1]
          Length = 268

 Score = 41.7 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 22/39 (56%), Gaps = 1/39 (2%)

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKL 389
           GL  ++ KAG   S  EA R +++  ++++  I+ + + 
Sbjct: 25  GLARVLSKAGLC-SRTEAARWIEAGRVQVDGRIVRDPEY 62


>gi|218904494|ref|YP_002452328.1| putative tryptophanyl-tRNA synthetase [Bacillus cereus AH820]
 gi|218534895|gb|ACK87293.1| putative tryptophanyl-tRNA synthetase [Bacillus cereus AH820]
          Length = 332

 Score = 41.7 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 22/96 (22%), Positives = 33/96 (34%), Gaps = 17/96 (17%)

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLF 222
           L+ +  ++   + Y IL A D + L +     +   G DQ  +I    D+         F
Sbjct: 123 LEVDAGVNMGLYTYPILMAADIL-LFQATHVPV---GKDQIQHIEIARDIATYFN--HTF 176

Query: 223 ALTSPL-----------LTTASGTKMGKTLSGAIWL 247
             T  L           L    G KM K+    I L
Sbjct: 177 GTTFTLPEYVIQEEGAILPGLDGRKMSKSYGNVIPL 212


>gi|222480845|ref|YP_002567082.1| Ribosomal protein S4E, central domain protein [Halorubrum
           lacusprofundi ATCC 49239]
 gi|254764559|sp|B9LSR5|RS4E_HALLT RecName: Full=30S ribosomal protein S4e
 gi|222453747|gb|ACM58012.1| Ribosomal protein S4E, central domain protein [Halorubrum
           lacusprofundi ATCC 49239]
          Length = 240

 Score = 41.7 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 1/53 (1%)

Query: 347 SRGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
             G+ L+ L+    G+  ST EAR  L ++++ +N   IS+E+  I + D  +
Sbjct: 34  EAGVPLVVLLRDVLGYVDSTKEARYALNNDSVLVNGDAISDEQRPIGMFDILA 86


>gi|85709418|ref|ZP_01040483.1| tryptophanyl-tRNA synthetase [Erythrobacter sp. NAP1]
 gi|85688128|gb|EAQ28132.1| tryptophanyl-tRNA synthetase [Erythrobacter sp. NAP1]
          Length = 339

 Score = 41.7 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 46/281 (16%), Positives = 90/281 (32%), Gaps = 60/281 (21%)

Query: 41  GYDLTASSLHAGHLT-QLMLLFWLQK----TGHKPISLMGGGTSIIG--DPSFRDESRRM 93
           G   T    H G+    ++    LQ      G +    +    ++    DP+   +    
Sbjct: 6   GIQPTGKP-HLGNYLGAIVNYVKLQDEAHAAGGECFIFLADLHALSQPHDPAELTK---- 60

Query: 94  MRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRM 153
              + +   +        + + +   +  A       WL        L        +NRM
Sbjct: 61  NTREMVATLVACGVDPSKTIL-FNQAQVPAHAE--LQWL--------LNGTARMGWLNRM 109

Query: 154 LSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLG 213
             ++    + +  QS++   F Y +LQA D + L +     +   G DQ  ++    D+ 
Sbjct: 110 TQWKDKAGKNREGQSVAL--FTYPVLQAADVL-LYQATHVPV---GEDQKQHLELARDIA 163

Query: 214 ERL------KTPKLFALTSP--------LLTTASGT-KMGKTLSGAIWLNKEMTSPYNFW 258
           ++       +   LF L  P        +++   GT KM K+             P +  
Sbjct: 164 QKFNNDFCSEDAPLFTLPEPYIPPAAARIMSLRDGTAKMSKS------------DPSDMS 211

Query: 259 Q-YWRNIDDADVVSFAKRLTT---LPMSEIDRMAKLQGKEI 295
           +    +  D  +    K  T    LP  E     + + K +
Sbjct: 212 RISLTDDPDTVMKKVKKAKTDPEPLPSEEKGLEDRAEAKNL 252


>gi|320583528|gb|EFW97741.1| tryptophanyl-tRNA synthetase [Pichia angusta DL-1]
          Length = 422

 Score = 41.7 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 55/342 (16%), Positives = 112/342 (32%), Gaps = 62/342 (18%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
            SER F       R LD+         Y G   ++ S+H GH+       WLQ     P+
Sbjct: 77  FSERDF------SRILDLYEHGEPFFLYTGRGPSSDSMHLGHMIPFTFTKWLQDVFDVPL 130

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
            +      +  D  F  +  + +  +++++  +         I  G    +  + ++  +
Sbjct: 131 II-----ELTDDEKFLFK--QKLTIEDVKKFAK---ENAKDIISVGFKPENTFIFSDLEY 180

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEF-NYMILQA-----YDFV 185
           + S  Y  ++R +    + +   +        +    +  L F +  I  A      D +
Sbjct: 181 MNSAFYETVVR-VSRQITTST--AKAVFG--FQDSDCIGKLHFASVQIATAFPSSFPDVL 235

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTASGTKMGKT-L 241
            L     C +     DQ        D+ ++LK  K   + +   P L   + TKM  +  
Sbjct: 236 GLPPKTPCLIPC-AIDQDPYFRVCRDVADKLKFSKPSLVHSRFFPALQGPT-TKMSASDE 293

Query: 242 SGAIWLNK------EMTSPYNFWQYWRNI---------DDADV-VSFAKRLTTLPMSEID 285
           + AI++        +  + Y F     ++          D DV   +         +E +
Sbjct: 294 NSAIFMTDTPKQIQKKVNKYAFSGGKVSVEEHRKYGGNPDVDVAYQYLSYF-----NENE 348

Query: 286 RMAKLQGKEIN-------EAKKIIATEITTMVHGREEAEKAA 320
            +     ++         E KK +  E         +  +A 
Sbjct: 349 ELLAKVAEQYRSGELLSGEMKK-LCIETLQQYVKEFQERRAK 389


>gi|320529115|ref|ZP_08030207.1| ribosomal RNA large subunit methyltransferase J [Selenomonas
           artemidis F0399]
 gi|320138745|gb|EFW30635.1| ribosomal RNA large subunit methyltransferase J [Selenomonas
           artemidis F0399]
          Length = 268

 Score = 41.7 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 28/63 (44%), Gaps = 10/63 (15%)

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIIS--------NEKLQIKLQDF--DSTGNIKL 404
           L+V  G A S   A+R + +  + ++   +         +  L++  +D    S G +KL
Sbjct: 9   LLVAQGLAPSRERAKRLIMAGQVLVDERRVDKAGTTVDADASLRVTGEDLPYVSRGGLKL 68

Query: 405 SFG 407
           + G
Sbjct: 69  AKG 71


>gi|254693218|ref|ZP_05155046.1| Cell division protein FtsJ [Brucella abortus bv. 3 str. Tulya]
 gi|261213461|ref|ZP_05927742.1| hemolysin A [Brucella abortus bv. 3 str. Tulya]
 gi|260915068|gb|EEX81929.1| hemolysin A [Brucella abortus bv. 3 str. Tulya]
          Length = 253

 Score = 41.7 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 8/45 (17%), Positives = 20/45 (44%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
            L+V+ GF  + + AR  ++   +K++   I+     +      +
Sbjct: 14  QLLVERGFFATRSRARDAIQRGTVKVDGRPITKPGQMVVRDAALA 58


>gi|253998637|ref|YP_003050700.1| pseudouridine synthase [Methylovorus sp. SIP3-4]
 gi|313200711|ref|YP_004039369.1| pseudouridine synthase [Methylovorus sp. MP688]
 gi|253985316|gb|ACT50173.1| pseudouridine synthase [Methylovorus sp. SIP3-4]
 gi|312440027|gb|ADQ84133.1| pseudouridine synthase [Methylovorus sp. MP688]
          Length = 362

 Score = 41.7 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 17/70 (24%), Positives = 27/70 (38%), Gaps = 3/70 (4%)

Query: 327 FDMSIHSQHM-PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIIS 385
           F    +  ++ PT S+S D  +    L  L+  AG   S  E    + S  I IN   ++
Sbjct: 5   FKQQRNPGNIKPTASVSTDPDAVPQRLHKLLALAGL-GSRREMEELILSGRITING-KVA 62

Query: 386 NEKLQIKLQD 395
                +   D
Sbjct: 63  EVGAAVVPGD 72


>gi|228909158|ref|ZP_04072986.1| hypothetical protein bthur0013_33130 [Bacillus thuringiensis IBL
           200]
 gi|228850479|gb|EEM95305.1| hypothetical protein bthur0013_33130 [Bacillus thuringiensis IBL
           200]
          Length = 327

 Score = 41.7 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 22/96 (22%), Positives = 33/96 (34%), Gaps = 17/96 (17%)

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLF 222
           L+ +  ++   + Y IL A D + L +     +   G DQ  +I    D+         F
Sbjct: 118 LEVDAGVNMGLYTYPILMAADIL-LFQATHVPV---GKDQIQHIEIARDIATYFN--HTF 171

Query: 223 ALTSPL-----------LTTASGTKMGKTLSGAIWL 247
             T  L           L    G KM K+    I L
Sbjct: 172 GTTFTLPEYVIQEEGAILPGLDGRKMSKSYGNVIPL 207


>gi|149197713|ref|ZP_01874763.1| Tryptophanyl-tRNA synthetase [Lentisphaera araneosa HTCC2155]
 gi|149139283|gb|EDM27686.1| Tryptophanyl-tRNA synthetase [Lentisphaera araneosa HTCC2155]
          Length = 333

 Score = 41.7 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 42/348 (12%), Positives = 105/348 (30%), Gaps = 61/348 (17%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   T +  H G+    +         ++    +    +             +   ++ +
Sbjct: 9   GIKPTGTP-HFGNFFGAINPALELTEKYQARYFIADYHA-------------LNTVKDPK 54

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           E ++    + ++++  G    DAL+        + +    L    +      M    + +
Sbjct: 55  EMLDHTYEVAATWLACGLDPNDALIYRQSDVPQTHELATFLMAFTAK---GMMNKAHAYK 111

Query: 161 SRLKREQ--------SLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL 212
           ++++  Q         ++   + Y +L A D +     YD  +   G DQ  ++    D+
Sbjct: 112 AKVQDNQAAGKDTDSGVNMGLYTYPVLMAADILL----YDTNIVPVGRDQKQHVEITADI 167

Query: 213 GERLK---TPKLFAL-------TSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWR 262
            + +      ++  +       +  ++    G KM K+ +  I       +P    +   
Sbjct: 168 AQSINHNYGEEILVIPEAIISESCDIIIGTDGRKMSKSYNNTI---PLFQTPKKMRKQIM 224

Query: 263 NID----------DAD---VVSFAKRLTTL-PMSEIDRMAKLQGKEINEAKKIIATEITT 308
            I           D D   V S  K          +    +  G     AK+ +   +  
Sbjct: 225 KITTNSQEIEEAKDPDTCNVFSLYKLFADQGEQDTLAERYRAGGLGWGHAKQELYEAVER 284

Query: 309 MVHGREEAEKAATAAMECFDM-----SIHSQHMPTISISKDEVSRGMG 351
                 E   A     +  D         ++ + + +I++   + G  
Sbjct: 285 KFAPMREKYDALIEDRQTLDKILQEGGEKARDIASSTITRLRKAAGFP 332


>gi|255712721|ref|XP_002552643.1| KLTH0C09768p [Lachancea thermotolerans]
 gi|238934022|emb|CAR22205.1| KLTH0C09768p [Lachancea thermotolerans]
          Length = 426

 Score = 41.7 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 25/62 (40%), Gaps = 6/62 (9%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
            SER F       + LD+         Y G   ++ S+H GH+   +   WLQ     P+
Sbjct: 82  FSERDF------NKILDLYEQGKPFFLYTGRGPSSDSMHLGHMVPFVFTKWLQDVFDAPL 135

Query: 72  SL 73
            +
Sbjct: 136 VI 137


>gi|254712999|ref|ZP_05174810.1| Cell division protein FtsJ [Brucella ceti M644/93/1]
 gi|254716647|ref|ZP_05178458.1| Cell division protein FtsJ [Brucella ceti M13/05/1]
 gi|261218448|ref|ZP_05932729.1| hemolysin A [Brucella ceti M13/05/1]
 gi|261320702|ref|ZP_05959899.1| hemolysin A [Brucella ceti M644/93/1]
 gi|260923537|gb|EEX90105.1| hemolysin A [Brucella ceti M13/05/1]
 gi|261293392|gb|EEX96888.1| hemolysin A [Brucella ceti M644/93/1]
          Length = 240

 Score = 41.7 bits (97), Expect = 0.24,   Method: Composition-based stats.
 Identities = 8/45 (17%), Positives = 20/45 (44%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
            L+V+ GF  + + AR  ++   +K++   I+     +      +
Sbjct: 14  QLLVERGFFATRSRARDAIQRGTVKVDGRPITKPGQMVVRDAALA 58


>gi|212696395|ref|ZP_03304523.1| hypothetical protein ANHYDRO_00932 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212676673|gb|EEB36280.1| hypothetical protein ANHYDRO_00932 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 1076

 Score = 41.7 bits (97), Expect = 0.24,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 39/112 (34%), Gaps = 19/112 (16%)

Query: 169 LSFLEFNYMILQAYDFVELA-KNYDCRLQMGGSDQ---WGNIICGIDLGERLKTPKLFAL 224
           + F + +Y   +  DF      ++ C     G DQ   W   +  I      K P    L
Sbjct: 567 MPFSQVHYPFAKGEDFENYFPADFICE----GIDQTRGWFYSLMAISTIITGKAPYKNVL 622

Query: 225 TSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRL 276
            + L+   +G KM K+    +       +P+  +  +     AD V F    
Sbjct: 623 VNDLVVDKNGQKMSKSKGNTL-------NPFELFDKY----GADAVRFYSLY 663


>gi|217960760|ref|YP_002339324.1| tryptophanyl-tRNA synthetase [Bacillus cereus AH187]
 gi|229139963|ref|ZP_04268527.1| Tryptophanyl-tRNA synthetase [Bacillus cereus BDRD-ST26]
 gi|217063523|gb|ACJ77773.1| putative tryptophanyl-tRNA synthetase [Bacillus cereus AH187]
 gi|228643478|gb|EEK99745.1| Tryptophanyl-tRNA synthetase [Bacillus cereus BDRD-ST26]
          Length = 332

 Score = 41.7 bits (97), Expect = 0.24,   Method: Composition-based stats.
 Identities = 22/96 (22%), Positives = 33/96 (34%), Gaps = 17/96 (17%)

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLF 222
           L+ +  ++   + Y IL A D + L +     +   G DQ  +I    D+         F
Sbjct: 123 LEVDAGVNMGLYTYPILMAADIL-LFQATHVPV---GKDQIQHIEIARDIATYFN--HTF 176

Query: 223 ALTSPL-----------LTTASGTKMGKTLSGAIWL 247
             T  L           L    G KM K+    I L
Sbjct: 177 GTTFTLPEYVIQEEGAILPGLDGRKMSKSYGNVIPL 212


>gi|194364580|ref|YP_002027190.1| pseudouridine synthase [Stenotrophomonas maltophilia R551-3]
 gi|194347384|gb|ACF50507.1| pseudouridine synthase [Stenotrophomonas maltophilia R551-3]
          Length = 268

 Score = 41.7 bits (97), Expect = 0.24,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 22/42 (52%), Gaps = 1/42 (2%)

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
           GL  ++ KAG   S +EA R +    ++++  I+ + +  I 
Sbjct: 32  GLARVLSKAGVC-SRSEAARWIAEGRVRVSGRIVRDPEFPIA 72


>gi|325912266|ref|ZP_08174663.1| tryptophan--tRNA ligase [Lactobacillus iners UPII 143-D]
 gi|325912496|ref|ZP_08174886.1| tryptophan--tRNA ligase [Lactobacillus iners UPII 60-B]
 gi|325475925|gb|EGC79094.1| tryptophan--tRNA ligase [Lactobacillus iners UPII 143-D]
 gi|325478169|gb|EGC81291.1| tryptophan--tRNA ligase [Lactobacillus iners UPII 60-B]
          Length = 339

 Score = 41.7 bits (97), Expect = 0.24,   Method: Composition-based stats.
 Identities = 34/225 (15%), Positives = 73/225 (32%), Gaps = 39/225 (17%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     LQ +G + P  ++    ++       D +R        ++
Sbjct: 11  PTGK-LHIGHYIGSLKNRVKLQNSGEYDPYIMIADTQAL------TDNARNP------EK 57

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNR-MLSFESVR 160
               +  +   ++  G     + +          +      ++ +   + R       ++
Sbjct: 58  IKNSLIQVALDYLAVGLDPEKSTIFVQSQIPALFELTAYFMDLVTVARLQRNPTVKNEIK 117

Query: 161 SR-LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
            +       + FL  NY + QA D       +   +   G DQ   +    ++     + 
Sbjct: 118 QKGFNDSLPIGFL--NYPVSQAADITA----FKASIIPVGDDQEPMLEQTREIVRTFNS- 170

Query: 220 KLFA---LTSPL----------LTTASGT-KMGKTLSGAIWLNKE 250
            ++    L  P           L    G  KM K+L+ AI+L+ +
Sbjct: 171 -VYGKEILVEPKGYFPPKGHGRLPGIDGNAKMSKSLNNAIYLSDD 214


>gi|256545768|ref|ZP_05473124.1| isoleucyl-tRNA synthetase (isoleucine--tRNA ligase)(IleRS)
           [Anaerococcus vaginalis ATCC 51170]
 gi|256398464|gb|EEU12085.1| isoleucyl-tRNA synthetase (isoleucine--tRNA ligase)(IleRS)
           [Anaerococcus vaginalis ATCC 51170]
          Length = 1059

 Score = 41.7 bits (97), Expect = 0.24,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 39/112 (34%), Gaps = 19/112 (16%)

Query: 169 LSFLEFNYMILQAYDFVELA-KNYDCRLQMGGSDQ---WGNIICGIDLGERLKTPKLFAL 224
           + F + +Y   +  DF      ++ C     G DQ   W   +  I      K P    L
Sbjct: 550 MPFSQVHYPFAKGEDFENYFPADFICE----GIDQTRGWFYSLMAISTIITGKAPYKNVL 605

Query: 225 TSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRL 276
            + L+   +G KM K+    +       +P+  +  +     AD V F    
Sbjct: 606 VNDLVVDKNGQKMSKSKGNTL-------NPFELFDKY----GADAVRFYSLY 646


>gi|46449495|gb|AAS96146.1| ribosomal large subunit pseudouridine synthase B [Desulfovibrio
           vulgaris str. Hildenborough]
          Length = 267

 Score = 41.7 bits (97), Expect = 0.24,   Method: Composition-based stats.
 Identities = 12/50 (24%), Positives = 21/50 (42%), Gaps = 2/50 (4%)

Query: 337 PTISISKDEVSRG-MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIIS 385
           P    S DEV  G   L   +  AG   S  +A   +    +++N  +++
Sbjct: 7   PQAGTSPDEVEDGGTRLNKALSGAGVC-SRRQADTLIAGGKVRVNGEVVT 55


>gi|75765038|ref|ZP_00744346.1| Ribosomal large subunit pseudouridine synthase B [Bacillus
           thuringiensis serovar israelensis ATCC 35646]
 gi|74487472|gb|EAO51380.1| Ribosomal large subunit pseudouridine synthase B [Bacillus
           thuringiensis serovar israelensis ATCC 35646]
          Length = 100

 Score = 41.7 bits (97), Expect = 0.24,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 1/53 (1%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           L  +I +AG A S  +A   ++   +K+N  I+     ++  QD     NI L
Sbjct: 4   LQKVIAQAGIA-SRRKAEELIQQGKVKVNGKIVKELGTKVTPQDKVEVNNIPL 55


>gi|190572990|ref|YP_001970835.1| putative RNA pseudouridine synthase [Stenotrophomonas maltophilia
           K279a]
 gi|190010912|emb|CAQ44521.2| putative RNA pseudouridine synthase [Stenotrophomonas maltophilia
           K279a]
          Length = 277

 Score = 41.7 bits (97), Expect = 0.24,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 22/41 (53%), Gaps = 1/41 (2%)

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
           GL  ++ KAG   S +EA R +    ++++  I+ + +  I
Sbjct: 41  GLARVLSKAGVC-SRSEAARWIAEGRVRVSGRIVRDPEFPI 80


>gi|256810445|ref|YP_003127814.1| ribosomal protein S4 [Methanocaldococcus fervens AG86]
 gi|256793645|gb|ACV24314.1| ribosomal protein S4 [Methanocaldococcus fervens AG86]
          Length = 184

 Score = 41.7 bits (97), Expect = 0.24,   Method: Composition-based stats.
 Identities = 20/126 (15%), Positives = 48/126 (38%), Gaps = 9/126 (7%)

Query: 281 MSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS 340
             E+ +   +  K   +A+++I+          + A++A          +I     PT+ 
Sbjct: 39  KREVWKAETILRKYRRQARRLISDRT------EQGAKEAVQLFNVLKKYNILKVENPTLD 92

Query: 341 ISKDEVSRGM---GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
                    +    L TL+ + G A +  +AR+ +    I +N  +++     + +++ D
Sbjct: 93  DVLSLTVEDILERRLQTLVFRKGLARTPRQARQLIVHGHIAVNGRVVTAPSYLVTVEEED 152

Query: 398 STGNIK 403
                K
Sbjct: 153 KITYAK 158


>gi|114798391|ref|YP_761748.1| lysyl-tRNA synthetase [Hyphomonas neptunium ATCC 15444]
 gi|114738565|gb|ABI76690.1| lysyl-tRNA synthetase [Hyphomonas neptunium ATCC 15444]
          Length = 530

 Score = 41.7 bits (97), Expect = 0.24,   Method: Composition-based stats.
 Identities = 24/129 (18%), Positives = 32/129 (24%), Gaps = 15/129 (11%)

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            DF           +M G D   N      +   L           L     G K+ KT 
Sbjct: 243 PDFGMRWAALGVDFEMFGKDHQANAPIYSKICRILGARPPEQYVYELFLDEKGEKISKTK 302

Query: 242 SGAI----WLNKEMTSPYNFWQ----------YWRNIDDADVVSFAKRLTTLPMSEIDRM 287
              I    WL          +Q          Y+  I  A V  +   L   P  E    
Sbjct: 303 GNGISVEQWLTYAPDESLALFQFQKPRVAKKLYFDVIPKA-VDEYLTFLEKFPQEEAAAQ 361

Query: 288 AKLQGKEIN 296
            +     I+
Sbjct: 362 LENPVWHIH 370


>gi|329118188|ref|ZP_08246898.1| S4 RNA-binding domain protein [Neisseria bacilliformis ATCC
           BAA-1200]
 gi|327465609|gb|EGF11884.1| S4 RNA-binding domain protein [Neisseria bacilliformis ATCC
           BAA-1200]
          Length = 79

 Score = 41.7 bits (97), Expect = 0.25,   Method: Composition-based stats.
 Identities = 12/62 (19%), Positives = 24/62 (38%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           E    + L  L+  A  A S  +A+  +    ++ N +  + +  +I+  D    G   L
Sbjct: 8   EDQEYIALCDLLKLAALAHSGGQAKALIAEGKVRRNGATETRKTAKIRGGDTIECGGAVL 67

Query: 405 SF 406
             
Sbjct: 68  QV 69


>gi|315644079|ref|ZP_07897249.1| tryptophanyl-tRNA synthetase [Paenibacillus vortex V453]
 gi|315280454|gb|EFU43743.1| tryptophanyl-tRNA synthetase [Paenibacillus vortex V453]
          Length = 327

 Score = 41.7 bits (97), Expect = 0.25,   Method: Composition-based stats.
 Identities = 34/193 (17%), Positives = 66/193 (34%), Gaps = 33/193 (17%)

Query: 138 IDLLREIGSFFS-VNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQ 196
           +  L E  + F  + RM      + +   + ++S   F Y +L A D + L +     + 
Sbjct: 89  LGWLLETQAHFGELKRMTQ---FKEKSDGKDTVSSALFTYPVLMAADVL-LYQATHVPV- 143

Query: 197 MGGSDQWGNIICGIDLGERLKT--PKLFALTSPLLTTAS---------GTKMGKTLSGAI 245
             G DQ  ++    D+ ER        F +  P++               KM K+     
Sbjct: 144 --GDDQKQHLELTRDVAERFNNRFGSTFIIPEPIIQDIGSRVMGLDDPSKKMSKSNPNKN 201

Query: 246 WLNKEMTSPYNFWQYWRN-IDDAD------------VVSFAKRLTTLPMSEIDRMAKL-Q 291
                M SP +  + +   + D++            V +  +  +     +I  + K   
Sbjct: 202 SCVHMMDSPEDIRRKFSKAVTDSEGEVRHDWEQKPAVSNLIEIYSVFSEEDISVIEKRYD 261

Query: 292 GKEINEAKKIIAT 304
           G+     KK +A 
Sbjct: 262 GQGYGTFKKELAE 274


>gi|196037940|ref|ZP_03105250.1| putative tryptophanyl-tRNA synthetase [Bacillus cereus NVH0597-99]
 gi|196031210|gb|EDX69807.1| putative tryptophanyl-tRNA synthetase [Bacillus cereus NVH0597-99]
          Length = 332

 Score = 41.7 bits (97), Expect = 0.25,   Method: Composition-based stats.
 Identities = 22/96 (22%), Positives = 33/96 (34%), Gaps = 17/96 (17%)

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLF 222
           L+ +  ++   + Y IL A D + L +     +   G DQ  +I    D+         F
Sbjct: 123 LEVDAGVNMGLYTYPILMAADIL-LFQATHVPV---GKDQIQHIEIARDIATYFN--HTF 176

Query: 223 ALTSPL-----------LTTASGTKMGKTLSGAIWL 247
             T  L           L    G KM K+    I L
Sbjct: 177 GTTFTLPEYVIQEEGAILPGLDGRKMSKSYGNVIPL 212


>gi|146310150|ref|YP_001175224.1| tryptophanyl-tRNA synthetase II [Enterobacter sp. 638]
 gi|145317026|gb|ABP59173.1| tryptophanyl-tRNA synthetase [Enterobacter sp. 638]
          Length = 334

 Score = 41.7 bits (97), Expect = 0.25,   Method: Composition-based stats.
 Identities = 36/227 (15%), Positives = 68/227 (29%), Gaps = 27/227 (11%)

Query: 33  QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRR 92
              +T   G   T   LH GH    +      +  ++   L+     +  + S   + R 
Sbjct: 2   HSKITILTGDRPTGP-LHLGHFVGSLRQRVALQHEYQQYILVADLQGLTDNGSTPQKIR- 59

Query: 93  MMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNR 152
                 I E +                 T   + +    L  +  + +     +    N 
Sbjct: 60  ----DNIPEVLADYLAAG-----IDPALTTICLQSALPALAELTALYMNIVTVARVERNP 110

Query: 153 MLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL 212
            +  E  +    R   + FL   Y I QA D       +   +   G DQ   I    ++
Sbjct: 111 TVKNEIAQKGFARSLPVGFL--VYPISQAADI----SAFKAEVVPVGDDQLPMIEQTNEI 164

Query: 213 GERLKT----------PKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
            +++ +            + + TS L       KM K+L   + L+ 
Sbjct: 165 VQKMNSLLPAPVLRHCKAMLSDTSRLPGIDGSAKMSKSLGNTLLLSA 211


>gi|28209926|ref|NP_780870.1| tRNA pseudouridine synthase A [Clostridium tetani E88]
 gi|28202361|gb|AAO34807.1| tRNA pseudouridine synthase A [Clostridium tetani E88]
          Length = 235

 Score = 41.7 bits (97), Expect = 0.25,   Method: Composition-based stats.
 Identities = 16/61 (26%), Positives = 22/61 (36%), Gaps = 3/61 (4%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
           M L   I   G   S  EA   +K   +K+N   I+     +  +D        L   KK
Sbjct: 1   MRLNNFISSTGIC-SRREADELIKQKKVKVNGE-IAPLGYIVNSKDKIEVNGKLLQK-KK 57

Query: 410 N 410
           N
Sbjct: 58  N 58


>gi|323500011|ref|ZP_08104965.1| tryptophanyl-tRNA synthetase II [Vibrio sinaloensis DSM 21326]
 gi|323314867|gb|EGA67924.1| tryptophanyl-tRNA synthetase II [Vibrio sinaloensis DSM 21326]
          Length = 340

 Score = 41.3 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 38/222 (17%), Positives = 74/222 (33%), Gaps = 33/222 (14%)

Query: 45  TASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIE 104
           T   LH GH    +      +  H    L+     +         +      +++  NI 
Sbjct: 20  TGP-LHLGHYVGSLAQRVALQDTHDQTILVADMQGL---------TDNAHTPEKVSSNIL 69

Query: 105 KIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK 164
            +   + +       KT   + +    L  +          +  +++R+    +V++ ++
Sbjct: 70  NVVADYLAVG-ISVEKTTICLQSQLPALAELTMY-----YSNLVTISRLERNPTVKNEIQ 123

Query: 165 R---EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKL 221
               E+S+      Y I QA D       ++  L   G DQ   +    ++  ++ T   
Sbjct: 124 SKGFERSIPAGFLTYPISQAADI----TGFNASLVPVGDDQLPMLEQTNEIVRKINTLAG 179

Query: 222 F-ALT--------SPLLTTASGT-KMGKTLSGAIWLNKEMTS 253
              LT        SP L +  G  KM K++  AI L      
Sbjct: 180 HNVLTECRPLLSQSPRLPSTDGKNKMSKSMGNAINLGATPDE 221


>gi|313837519|gb|EFS75233.1| conserved hypothetical protein [Propionibacterium acnes HL037PA2]
 gi|314927273|gb|EFS91104.1| conserved hypothetical protein [Propionibacterium acnes HL044PA1]
 gi|314972725|gb|EFT16822.1| conserved hypothetical protein [Propionibacterium acnes HL037PA3]
 gi|328907871|gb|EGG27634.1| pseudouridylate synthase [Propionibacterium sp. P08]
          Length = 245

 Score = 41.3 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 9/49 (18%), Positives = 24/49 (48%), Gaps = 1/49 (2%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
            +G+ L  ++ +AG A S   A   + +  +++N  +I  +  ++  + 
Sbjct: 4   EQGIRLQKVLAQAGLA-SRRAAEEMIAAGRVEVNGELIVEQGRRVDPEH 51


>gi|294786169|ref|ZP_06751423.1| tryptophan--tRNA ligase [Parascardovia denticolens F0305]
 gi|315227376|ref|ZP_07869163.1| tryptophan--tRNA ligase [Parascardovia denticolens DSM 10105]
 gi|294485002|gb|EFG32636.1| tryptophan--tRNA ligase [Parascardovia denticolens F0305]
 gi|315119826|gb|EFT82959.1| tryptophan--tRNA ligase [Parascardovia denticolens DSM 10105]
          Length = 368

 Score = 41.3 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 33/218 (15%), Positives = 60/218 (27%), Gaps = 32/218 (14%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN 102
            T   LH GHL   +     LQ  G     ++     I         + R          
Sbjct: 49  PTGR-LHLGHLFGSLQERVRLQNLGVHTNIIVADYQVI---------TDRDTTDHMEDNV 98

Query: 103 IEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR 162
           +  I    ++ I         +  ++     +   +  L  +     +            
Sbjct: 99  LNLILDYMAAGID---PSKTMIFTHSAIPAENQLMLPFLSLVTEAELLRNPTVKSEAE-- 153

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK----- 217
                +L+ L   Y + QA D   L    +      G D   ++     +  R       
Sbjct: 154 -ASGHALTGLLLTYPVHQACD--ILFCKANVV--PIGKDNLPHVEITRTIARRFNERYAR 208

Query: 218 TPKLFAL-TSPL-----LTTASGTKMGKTLSGAIWLNK 249
              +F   T+ L     +    G KM K+   +I L+ 
Sbjct: 209 KSPVFVEPTAILSEASEIPGLDGRKMSKSYGNSIMLSA 246


>gi|262173271|ref|ZP_06040948.1| tryptophanyl-tRNA synthetase [Vibrio mimicus MB-451]
 gi|261890629|gb|EEY36616.1| tryptophanyl-tRNA synthetase [Vibrio mimicus MB-451]
          Length = 340

 Score = 41.3 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 36/220 (16%), Positives = 69/220 (31%), Gaps = 33/220 (15%)

Query: 45  TASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIE 104
           T   LH GH    +      +  H+   L+     +  +            S  I   + 
Sbjct: 20  TGP-LHLGHYVGSLKQRVALQEIHEQTILVADMQGLTDNAH-----NPKKVSSNILNVVA 73

Query: 105 KIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK 164
               +          KT   + +    L  +          +  +++R+    +V+S ++
Sbjct: 74  DYLAVG-----IDPTKTTICLQSQLPALAELTMY-----YSNLVTISRLERNPTVKSEIQ 123

Query: 165 R---EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK---T 218
               E+S+      Y I QA D       ++  L   G DQ   +    ++  ++     
Sbjct: 124 NKGFERSIPAGFLTYPISQAADI----TGFNATLVPVGDDQLPMLEQANEIVRKVNSLAG 179

Query: 219 PKLFALTSPLLTT------ASGT-KMGKTLSGAIWLNKEM 251
             +     PLL+         G  KM K++  AI L    
Sbjct: 180 RNVLNECRPLLSNASRLPSTDGKSKMSKSMGNAINLGASP 219


>gi|296810354|ref|XP_002845515.1| 37S ribosomal protein NAM9 [Arthroderma otae CBS 113480]
 gi|238842903|gb|EEQ32565.1| 37S ribosomal protein NAM9 [Arthroderma otae CBS 113480]
          Length = 477

 Score = 41.3 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 12/67 (17%), Positives = 29/67 (43%), Gaps = 2/67 (2%)

Query: 329 MSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEK 388
            +   +  P + ++   + R + +   I +A FA+ST +AR+ +    + +N   +    
Sbjct: 111 KAQKPRDTPYMQMTFAPLERRLDVA--IFRALFASSTRQARQFVIHGGVTVNGKKMQYPG 168

Query: 389 LQIKLQD 395
             +   D
Sbjct: 169 YLLNPGD 175


>gi|148559255|ref|YP_001258457.1| hemolysin A [Brucella ovis ATCC 25840]
 gi|148370512|gb|ABQ60491.1| hemolysin A [Brucella ovis ATCC 25840]
          Length = 253

 Score = 41.3 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 8/45 (17%), Positives = 20/45 (44%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
            L+V+ GF  + + AR  ++   +K++   I+     +      +
Sbjct: 14  QLLVERGFFATRSRARDAIQRGTVKVDGRPITKPGQMVVRDAALA 58


>gi|78188056|ref|YP_378394.1| tryptophanyl-tRNA synthetase [Chlorobium chlorochromatii CaD3]
 gi|78170255|gb|ABB27351.1| tryptophanyl-tRNA synthetase [Chlorobium chlorochromatii CaD3]
          Length = 354

 Score = 41.3 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 38/170 (22%), Positives = 60/170 (35%), Gaps = 33/170 (19%)

Query: 167 QSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT-------P 219
            S+S+    Y +LQ+ D + L K     +   G DQ  ++    ++  +           
Sbjct: 128 DSMSYGHLGYPVLQSADIL-LYKANVVPV---GEDQIPHVEITREIARKFNNHFPHPLYG 183

Query: 220 KLFALTSPLLTTA------SGT-KMGKTLSGAIWLNKE-------MTSPYNFWQYWRNID 265
            +FA   P +T         G  KM K+L   I+L+         M +     Q  R  +
Sbjct: 184 NVFAEPEPKITKFARLAGLDGKAKMSKSLGNTIFLSDPPDEVLRKMRTAVTDTQKVRK-N 242

Query: 266 DA------DVVSFAKRL-TTLPMSEIDRMAKLQGKEINEAKKIIATEITT 308
           DA       V S+ KR  T     EI    +       + KK  A  I+ 
Sbjct: 243 DAGRPEVCTVFSYHKRFSTPEQCEEIAAGCQSGALGCVDCKKQCAANISA 292


>gi|309803647|ref|ZP_07697737.1| tryptophan--tRNA ligase [Lactobacillus iners LactinV 11V1-d]
 gi|308164245|gb|EFO66502.1| tryptophan--tRNA ligase [Lactobacillus iners LactinV 11V1-d]
          Length = 339

 Score = 41.3 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 37/223 (16%), Positives = 72/223 (32%), Gaps = 35/223 (15%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     LQ +G + P  ++    ++       D +R     +    
Sbjct: 11  PTGK-LHIGHYIGSLKNRVKLQNSGEYDPYIMIADTQAL------TDNARNP--EKIKNS 61

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
            I+      +  +     K+   + +    L  +    +     +    N  +  E  + 
Sbjct: 62  LIQVALDYLAVGLD--PEKSTIFVQSQIPALFELTAYFMDLVTVARLQRNPTVKNEIKQK 119

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKL 221
                  + FL  NY + QA D       +   +   G DQ   +    ++     +  +
Sbjct: 120 EFNDSLPIGFL--NYPVSQAADITA----FKASIIPVGDDQEPMLEQTREIVRTFNS--V 171

Query: 222 FA---LTSPL----------LTTASGT-KMGKTLSGAIWLNKE 250
           +    L  P           L    G  KM K+L+ AI+L+ +
Sbjct: 172 YGKEILVEPKGYFPPKGHGRLPGIDGNAKMSKSLNNAIYLSDD 214


>gi|238021001|ref|ZP_04601427.1| hypothetical protein GCWU000324_00898 [Kingella oralis ATCC 51147]
 gi|237867981|gb|EEP68987.1| hypothetical protein GCWU000324_00898 [Kingella oralis ATCC 51147]
          Length = 335

 Score = 41.3 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 31/154 (20%), Positives = 50/154 (32%), Gaps = 26/154 (16%)

Query: 174 FNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK---TPKLFAL------ 224
           ++Y IL   D + + K     +   G DQ  ++    D+ +R       ++F L      
Sbjct: 134 YSYPILMTADIL-MFKANSVPV---GRDQIQHVEMARDIAQRFNHRFGKEIFVLPEAAID 189

Query: 225 -TSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWR---------NIDDADVVSFAK 274
               LL    G KM K+    I L +                         D   + F  
Sbjct: 190 ENVQLLVGLDGRKMSKSYGNTIPLFQTPKQRQKSVNKIVTNLKEPGEPKQKDESPL-FEI 248

Query: 275 RLTTLPMSEIDRMAKL--QGKEINEAKKIIATEI 306
                   E     K+  +G    EAKK++A +I
Sbjct: 249 YQAFSTPEETREFEKMLNEGLAWGEAKKLLAAKI 282


>gi|42738354|gb|AAS42284.1| tryptophanyl-tRNA synthetase, putative [Bacillus cereus ATCC 10987]
          Length = 327

 Score = 41.3 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 22/96 (22%), Positives = 33/96 (34%), Gaps = 17/96 (17%)

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLF 222
           L+ +  ++   + Y IL A D + L +     +   G DQ  +I    D+         F
Sbjct: 118 LEVDAGVNMGLYTYPILMAADIL-LFQATHVPV---GKDQIQHIEIARDIATYFN--HTF 171

Query: 223 ALTSPL-----------LTTASGTKMGKTLSGAIWL 247
             T  L           L    G KM K+    I L
Sbjct: 172 GTTFKLPEYVIQEEGAILPGLDGRKMSKSYGNVIPL 207


>gi|17987780|ref|NP_540414.1| hemolysin [Brucella melitensis bv. 1 str. 16M]
 gi|225851973|ref|YP_002732206.1| hemolysin A [Brucella melitensis ATCC 23457]
 gi|256044154|ref|ZP_05447061.1| hemolysin A [Brucella melitensis bv. 1 str. Rev.1]
 gi|256112957|ref|ZP_05453865.1| hemolysin A [Brucella melitensis bv. 3 str. Ether]
 gi|256264519|ref|ZP_05467051.1| cell division protein FtsJ [Brucella melitensis bv. 2 str. 63/9]
 gi|260563511|ref|ZP_05833997.1| cell division protein FtsJ [Brucella melitensis bv. 1 str. 16M]
 gi|265990566|ref|ZP_06103123.1| hemolysin A [Brucella melitensis bv. 1 str. Rev.1]
 gi|265994396|ref|ZP_06106953.1| hemolysin A [Brucella melitensis bv. 3 str. Ether]
 gi|17983504|gb|AAL52678.1| hemolysin [Brucella melitensis bv. 1 str. 16M]
 gi|225640338|gb|ACO00252.1| hemolysin A [Brucella melitensis ATCC 23457]
 gi|260153527|gb|EEW88619.1| cell division protein FtsJ [Brucella melitensis bv. 1 str. 16M]
 gi|262765509|gb|EEZ11298.1| hemolysin A [Brucella melitensis bv. 3 str. Ether]
 gi|263001350|gb|EEZ13925.1| hemolysin A [Brucella melitensis bv. 1 str. Rev.1]
 gi|263094852|gb|EEZ18590.1| cell division protein FtsJ [Brucella melitensis bv. 2 str. 63/9]
 gi|326408469|gb|ADZ65534.1| hemolysin A [Brucella melitensis M28]
 gi|326538186|gb|ADZ86401.1| hemolysin A [Brucella melitensis M5-90]
          Length = 253

 Score = 41.3 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 8/45 (17%), Positives = 20/45 (44%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
            L+V+ GF  + + AR  ++   +K++   I+     +      +
Sbjct: 14  QLLVERGFFATRSRARDAIQRGTVKVDGRPITKPGQMVVRDAALA 58


>gi|23501338|ref|NP_697465.1| hemolysin A [Brucella suis 1330]
 gi|62289422|ref|YP_221215.1| hemolysin A [Brucella abortus bv. 1 str. 9-941]
 gi|82699349|ref|YP_413923.1| cell division protein FtsJ [Brucella melitensis biovar Abortus
           2308]
 gi|161618409|ref|YP_001592296.1| hemolysin A [Brucella canis ATCC 23365]
 gi|189023673|ref|YP_001934441.1| Cell division protein FtsJ [Brucella abortus S19]
 gi|225626945|ref|ZP_03784984.1| hemolysin A [Brucella ceti str. Cudo]
 gi|237814910|ref|ZP_04593908.1| hemolysin A [Brucella abortus str. 2308 A]
 gi|254688735|ref|ZP_05151989.1| Cell division protein FtsJ [Brucella abortus bv. 6 str. 870]
 gi|254696863|ref|ZP_05158691.1| Cell division protein FtsJ [Brucella abortus bv. 2 str. 86/8/59]
 gi|254701242|ref|ZP_05163070.1| Cell division protein FtsJ [Brucella suis bv. 5 str. 513]
 gi|254703789|ref|ZP_05165617.1| Cell division protein FtsJ [Brucella suis bv. 3 str. 686]
 gi|254707834|ref|ZP_05169662.1| Cell division protein FtsJ [Brucella pinnipedialis M163/99/10]
 gi|254709585|ref|ZP_05171396.1| Cell division protein FtsJ [Brucella pinnipedialis B2/94]
 gi|254729768|ref|ZP_05188346.1| Cell division protein FtsJ [Brucella abortus bv. 4 str. 292]
 gi|256031077|ref|ZP_05444691.1| Cell division protein FtsJ [Brucella pinnipedialis M292/94/1]
 gi|256060571|ref|ZP_05450739.1| Cell division protein FtsJ [Brucella neotomae 5K33]
 gi|256159141|ref|ZP_05456962.1| Cell division protein FtsJ [Brucella ceti M490/95/1]
 gi|256254480|ref|ZP_05460016.1| Cell division protein FtsJ [Brucella ceti B1/94]
 gi|256256982|ref|ZP_05462518.1| Cell division protein FtsJ [Brucella abortus bv. 9 str. C68]
 gi|256368892|ref|YP_003106398.1| hemolysin A [Brucella microti CCM 4915]
 gi|260168208|ref|ZP_05755019.1| hemolysin A [Brucella sp. F5/99]
 gi|260545826|ref|ZP_05821567.1| cell division protein FtsJ [Brucella abortus NCTC 8038]
 gi|260566958|ref|ZP_05837428.1| cell division protein FtsJ [Brucella suis bv. 4 str. 40]
 gi|260754214|ref|ZP_05866562.1| hemolysin A [Brucella abortus bv. 6 str. 870]
 gi|260757434|ref|ZP_05869782.1| hemolysin A [Brucella abortus bv. 4 str. 292]
 gi|260761259|ref|ZP_05873602.1| hemolysin A [Brucella abortus bv. 2 str. 86/8/59]
 gi|260883239|ref|ZP_05894853.1| hemolysin A [Brucella abortus bv. 9 str. C68]
 gi|261221653|ref|ZP_05935934.1| hemolysin A [Brucella ceti B1/94]
 gi|261315321|ref|ZP_05954518.1| hemolysin A [Brucella pinnipedialis M163/99/10]
 gi|261317113|ref|ZP_05956310.1| hemolysin A [Brucella pinnipedialis B2/94]
 gi|261324566|ref|ZP_05963763.1| hemolysin A [Brucella neotomae 5K33]
 gi|261751781|ref|ZP_05995490.1| hemolysin A [Brucella suis bv. 5 str. 513]
 gi|261754436|ref|ZP_05998145.1| hemolysin A [Brucella suis bv. 3 str. 686]
 gi|261757669|ref|ZP_06001378.1| cell division protein FtsJ [Brucella sp. F5/99]
 gi|265988150|ref|ZP_06100707.1| hemolysin A [Brucella pinnipedialis M292/94/1]
 gi|265997615|ref|ZP_06110172.1| hemolysin A [Brucella ceti M490/95/1]
 gi|294851815|ref|ZP_06792488.1| hemolysin [Brucella sp. NVSL 07-0026]
 gi|297247835|ref|ZP_06931553.1| hemolysin [Brucella abortus bv. 5 str. B3196]
 gi|23347229|gb|AAN29380.1| hemolysin A [Brucella suis 1330]
 gi|62195554|gb|AAX73854.1| TlyA, hemolysin A [Brucella abortus bv. 1 str. 9-941]
 gi|82615450|emb|CAJ10419.1| Cell division protein FtsJ:RNA-binding S4:Hemolysin A [Brucella
           melitensis biovar Abortus 2308]
 gi|161335220|gb|ABX61525.1| hemolysin A [Brucella canis ATCC 23365]
 gi|189019245|gb|ACD71967.1| Cell division protein FtsJ [Brucella abortus S19]
 gi|225618602|gb|EEH15645.1| hemolysin A [Brucella ceti str. Cudo]
 gi|237789747|gb|EEP63957.1| hemolysin A [Brucella abortus str. 2308 A]
 gi|255999050|gb|ACU47449.1| hemolysin A [Brucella microti CCM 4915]
 gi|260097233|gb|EEW81108.1| cell division protein FtsJ [Brucella abortus NCTC 8038]
 gi|260156476|gb|EEW91556.1| cell division protein FtsJ [Brucella suis bv. 4 str. 40]
 gi|260667752|gb|EEX54692.1| hemolysin A [Brucella abortus bv. 4 str. 292]
 gi|260671691|gb|EEX58512.1| hemolysin A [Brucella abortus bv. 2 str. 86/8/59]
 gi|260674322|gb|EEX61143.1| hemolysin A [Brucella abortus bv. 6 str. 870]
 gi|260872767|gb|EEX79836.1| hemolysin A [Brucella abortus bv. 9 str. C68]
 gi|260920237|gb|EEX86890.1| hemolysin A [Brucella ceti B1/94]
 gi|261296336|gb|EEX99832.1| hemolysin A [Brucella pinnipedialis B2/94]
 gi|261300546|gb|EEY04043.1| hemolysin A [Brucella neotomae 5K33]
 gi|261304347|gb|EEY07844.1| hemolysin A [Brucella pinnipedialis M163/99/10]
 gi|261737653|gb|EEY25649.1| cell division protein FtsJ [Brucella sp. F5/99]
 gi|261741534|gb|EEY29460.1| hemolysin A [Brucella suis bv. 5 str. 513]
 gi|261744189|gb|EEY32115.1| hemolysin A [Brucella suis bv. 3 str. 686]
 gi|262552083|gb|EEZ08073.1| hemolysin A [Brucella ceti M490/95/1]
 gi|264660347|gb|EEZ30608.1| hemolysin A [Brucella pinnipedialis M292/94/1]
 gi|294820404|gb|EFG37403.1| hemolysin [Brucella sp. NVSL 07-0026]
 gi|297175004|gb|EFH34351.1| hemolysin [Brucella abortus bv. 5 str. B3196]
          Length = 253

 Score = 41.3 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 8/45 (17%), Positives = 20/45 (44%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
            L+V+ GF  + + AR  ++   +K++   I+     +      +
Sbjct: 14  QLLVERGFFATRSRARDAIQRGTVKVDGRPITKPGQMVVRDAALA 58


>gi|77413645|ref|ZP_00789830.1| tryptophanyl-tRNA synthetase [Streptococcus agalactiae 515]
 gi|77160300|gb|EAO71426.1| tryptophanyl-tRNA synthetase [Streptococcus agalactiae 515]
          Length = 341

 Score = 41.3 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 41/228 (17%), Positives = 65/228 (28%), Gaps = 38/228 (16%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGHKPISLM----GGGTSIIGDPSFRDESRRMMRSQE 98
            T   LH GH    +     LQ  G   + +        T    DP              
Sbjct: 12  PTGK-LHIGHYVGSLKNRVLLQNEGSYTLFVFLADQQALTDHAKDPQ------------T 58

Query: 99  IQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
           I E+I  +  +    +     K+   + +    L  +    +     +    N  +  E 
Sbjct: 59  IVESIGNV-ALDYLAVGLDPNKSTLFIQSQIPELAELSMYYMNLVSLARLERNPTVKTEI 117

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
            +          FL   Y + QA D      N    L   G+DQ   I    ++      
Sbjct: 118 AQKGFGESIPAGFL--VYPVAQAADITAFKAN----LVPVGTDQKPMIEQTREIVRSFNH 171

Query: 219 P-KLFALTSP-----------LLTTASGT-KMGKTLSGAIWLNKEMTS 253
                 L  P            L    G  KM K+L+  I+L  +M +
Sbjct: 172 AYNCQVLVEPEGIYPENDAAGRLPGLDGNAKMSKSLNNGIFLADDMDT 219


>gi|253578001|ref|ZP_04855273.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
 gi|251850319|gb|EES78277.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
          Length = 323

 Score = 41.3 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 13/68 (19%), Positives = 28/68 (41%), Gaps = 2/68 (2%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
              + +   + +AG   S  EA R ++   I +N    +    ++ L+D     NI +  
Sbjct: 11  DEKIRINKYLSEAGIC-SRREADRMIEEGRITVNGKK-AESGQKVSLEDEICADNIPVHK 68

Query: 407 GKKNHIIC 414
            +K  ++ 
Sbjct: 69  NEKKVLLL 76


>gi|309805774|ref|ZP_07699811.1| tryptophan--tRNA ligase [Lactobacillus iners LactinV 09V1-c]
 gi|309805972|ref|ZP_07699999.1| tryptophan--tRNA ligase [Lactobacillus iners LactinV 03V1-b]
 gi|312874097|ref|ZP_07734132.1| tryptophan--tRNA ligase [Lactobacillus iners LEAF 2052A-d]
 gi|312874735|ref|ZP_07734754.1| tryptophan--tRNA ligase [Lactobacillus iners LEAF 2053A-b]
 gi|329920944|ref|ZP_08277493.1| tryptophan--tRNA ligase [Lactobacillus iners SPIN 1401G]
 gi|308164894|gb|EFO67140.1| tryptophan--tRNA ligase [Lactobacillus iners LactinV 09V1-c]
 gi|308167654|gb|EFO69806.1| tryptophan--tRNA ligase [Lactobacillus iners LactinV 03V1-b]
 gi|311089480|gb|EFQ47905.1| tryptophan--tRNA ligase [Lactobacillus iners LEAF 2053A-b]
 gi|311090437|gb|EFQ48846.1| tryptophan--tRNA ligase [Lactobacillus iners LEAF 2052A-d]
 gi|328935509|gb|EGG31980.1| tryptophan--tRNA ligase [Lactobacillus iners SPIN 1401G]
          Length = 339

 Score = 41.3 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 34/225 (15%), Positives = 73/225 (32%), Gaps = 39/225 (17%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     LQ +G + P  ++    ++       D +R        ++
Sbjct: 11  PTGK-LHIGHYIGSLKNRVKLQNSGEYDPYIMIADTQAL------TDNARNP------EK 57

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNR-MLSFESVR 160
               +  +   ++  G     + +          +      ++ +   + R       ++
Sbjct: 58  IKNSLIQVALDYLAVGLDPEKSTIFVQSQIPALFELTAYFMDLVTVARLQRNPTVKNEIK 117

Query: 161 SR-LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
            +       + FL  NY + QA D       +   +   G DQ   +    ++     + 
Sbjct: 118 QKGFNDSLPIGFL--NYPVSQAADITA----FKASIIPVGDDQEPMLEQTREIVRTFNS- 170

Query: 220 KLFA---LTSPL----------LTTASGT-KMGKTLSGAIWLNKE 250
            ++    L  P           L    G  KM K+L+ AI+L+ +
Sbjct: 171 -VYGKEILVEPKGYFPPKGHGRLPGIDGNAKMSKSLNNAIYLSDD 214


>gi|291483619|dbj|BAI84694.1| tryptophanyl-tRNA synthetase [Bacillus subtilis subsp. natto
           BEST195]
          Length = 345

 Score = 41.3 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 47/298 (15%), Positives = 93/298 (31%), Gaps = 46/298 (15%)

Query: 35  VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMM 94
             T + G   +  S+  G+    M  F   +  +     +    + I  P  R E R+  
Sbjct: 17  KQTIFSGIQPSG-SVTLGNYIGAMKQFVELQHDYNSYFCIVDQHA-ITVPQDRLELRK-- 72

Query: 95  RSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRML 154
                      I+ + + ++  G     A +          +   +++ +     + RM 
Sbjct: 73  ----------NIRNLAALYLAVGLDPEKATLFIQSEVPAHAQAGWMMQCVAYIGELERMT 122

Query: 155 SFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
                + + K  +++      Y  L A D +     Y   L   G DQ  ++    +L E
Sbjct: 123 Q---FKDKSKGNEAVVSGLLTYPPLMAADILL----YGTDLVPVGEDQKQHLELTRNLAE 175

Query: 215 RLKTPKLFALTSPLLTTAS-G----------TKMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
           R         T P +     G           KM K+          +  P    +  ++
Sbjct: 176 RFNKKYNDIFTIPEVKIPKVGARIMSLNDPLKKMSKSDPNQKAYITLLDEPKQLEKKIKS 235

Query: 264 -IDDAD------------VVSFAKRLTTLPMSEIDR-MAKLQGKEINEAKKIIATEIT 307
            + D++            V +     + L  + I+   AK +GK   E K  +A  + 
Sbjct: 236 AVTDSEGIVKFDKENKPGVSNLLTIYSILGNTTIEELEAKYEGKGYGEFKGDLAEVVV 293


>gi|160901836|ref|YP_001567417.1| tryptophanyl-tRNA synthetase [Petrotoga mobilis SJ95]
 gi|160359480|gb|ABX31094.1| tryptophanyl-tRNA synthetase [Petrotoga mobilis SJ95]
          Length = 325

 Score = 41.3 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 17/78 (21%), Positives = 28/78 (35%), Gaps = 12/78 (15%)

Query: 176 YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--------PKLFALTSP 227
           Y +LQA D + + K     +   G DQ  ++    ++  +           P+      P
Sbjct: 128 YPVLQAADIL-IYKGDSVPV---GEDQIYHLEFTREIARKFNMKYKEIFPEPQPIISKVP 183

Query: 228 LLTTASGTKMGKTLSGAI 245
            L    G KM K+    I
Sbjct: 184 KLPGTDGRKMSKSYGNVI 201


>gi|46137247|ref|XP_390315.1| hypothetical protein FG10139.1 [Gibberella zeae PH-1]
          Length = 451

 Score = 41.3 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 16/61 (26%), Positives = 20/61 (32%), Gaps = 1/61 (1%)

Query: 15  RGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +  + L           Y G   +  SLH GH   L    WLQ     P+  
Sbjct: 70  RGLFFSHRDFDKILTKYEHGEPFFLYTGRGPSTGSLHLGHTIPLEFTKWLQDVFDVPLVF 129

Query: 74  M 74
           M
Sbjct: 130 M 130


>gi|22538302|ref|NP_689153.1| tryptophanyl-tRNA synthetase II [Streptococcus agalactiae 2603V/R]
 gi|25012162|ref|NP_736557.1| tryptophanyl-tRNA synthetase II [Streptococcus agalactiae NEM316]
 gi|76787411|ref|YP_330716.1| tryptophanyl-tRNA synthetase II [Streptococcus agalactiae A909]
 gi|76798674|ref|ZP_00780898.1| tryptophanyl-tRNA synthetase [Streptococcus agalactiae 18RS21]
 gi|77405630|ref|ZP_00782719.1| tryptophanyl-tRNA synthetase [Streptococcus agalactiae H36B]
 gi|77407689|ref|ZP_00784444.1| tryptophanyl-tRNA synthetase [Streptococcus agalactiae COH1]
 gi|77411780|ref|ZP_00788116.1| tryptophanyl-tRNA synthetase [Streptococcus agalactiae CJB111]
 gi|39932194|sp|Q8DWP7|SYW_STRA5 RecName: Full=Tryptophanyl-tRNA synthetase; AltName:
           Full=Tryptophan--tRNA ligase; Short=TrpRS
 gi|39932197|sp|Q8E2J5|SYW_STRA3 RecName: Full=Tryptophanyl-tRNA synthetase; AltName:
           Full=Tryptophan--tRNA ligase; Short=TrpRS
 gi|22535218|gb|AAN01026.1|AE014290_1 tryptophanyl-tRNA synthetase [Streptococcus agalactiae 2603V/R]
 gi|24413706|emb|CAD47786.1| tryptophanyl-tRNA synthetase [Streptococcus agalactiae NEM316]
 gi|76562468|gb|ABA45052.1| tryptophanyl-tRNA synthetase [Streptococcus agalactiae A909]
 gi|76585984|gb|EAO62518.1| tryptophanyl-tRNA synthetase [Streptococcus agalactiae 18RS21]
 gi|77162171|gb|EAO73146.1| tryptophanyl-tRNA synthetase [Streptococcus agalactiae CJB111]
 gi|77173688|gb|EAO76802.1| tryptophanyl-tRNA synthetase [Streptococcus agalactiae COH1]
 gi|77175774|gb|EAO78554.1| tryptophanyl-tRNA synthetase [Streptococcus agalactiae H36B]
 gi|319746193|gb|EFV98463.1| tryptophan--tRNA ligase [Streptococcus agalactiae ATCC 13813]
          Length = 341

 Score = 41.3 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 41/228 (17%), Positives = 65/228 (28%), Gaps = 38/228 (16%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGHKPISLM----GGGTSIIGDPSFRDESRRMMRSQE 98
            T   LH GH    +     LQ  G   + +        T    DP              
Sbjct: 12  PTGK-LHIGHYVGSLKNRVLLQNEGSYTLFVFLADQQALTDHAKDPQ------------T 58

Query: 99  IQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
           I E+I  +  +    +     K+   + +    L  +    +     +    N  +  E 
Sbjct: 59  IVESIGNV-ALDYLAVGLDPNKSTLFIQSQIPELAELSMYYMNLVSLARLERNPTVKTEI 117

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
            +          FL   Y + QA D      N    L   G+DQ   I    ++      
Sbjct: 118 AQKGFGESIPAGFL--VYPVAQAADITAFKAN----LVPVGTDQKPMIEQTREIVRSFNH 171

Query: 219 P-KLFALTSP-----------LLTTASGT-KMGKTLSGAIWLNKEMTS 253
                 L  P            L    G  KM K+L+  I+L  +M +
Sbjct: 172 AYNCQVLVEPEGIYPENDAAGRLPGLDGNAKMSKSLNNGIFLADDMDT 219


>gi|332871616|ref|ZP_08440091.1| tryptophan--tRNA ligase [Acinetobacter baumannii 6013113]
 gi|332731349|gb|EGJ62643.1| tryptophan--tRNA ligase [Acinetobacter baumannii 6013113]
          Length = 337

 Score = 41.3 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 63/340 (18%), Positives = 103/340 (30%), Gaps = 48/340 (14%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
            T   LH GH    +      +  H    L+    ++  +    D+ RR      I E  
Sbjct: 16  PTGQ-LHLGHFVGSLRSRVGLQDSHHQHLLLADAQALTDNADNPDKVRR-----NILEVA 69

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR- 162
                +          KT   + +    L  +  +  L  +              ++ R 
Sbjct: 70  LDYLAVG-----IDPTKTTICVQSCLPALNELTML-YLNFVTVARLERNPTIKSEIQMRG 123

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT---- 218
            +R+    FL   Y + QA D       +   +   G DQ   I    ++  R+      
Sbjct: 124 FERDIPAGFL--CYPVAQAADITA----FKATVVPVGEDQIPMIEQTNEIVRRVNRQIGQ 177

Query: 219 ---PKLFALTSPL--LTTASGT-KMGKTLSGAIWLNKE----MTSPYNFWQ--YWRNIDD 266
              P+  AL S +  L    G  KM K+L   I LN        +    +       I+D
Sbjct: 178 DLLPECKALLSNMARLPCFDGKAKMSKSLGNTIVLNASDKDIKKAVNAMYTDPNHLRIED 237

Query: 267 ------ADVVSFAKRLTT--LPMSEIDRMAKLQGKEINEAKKI----IATEITTMVHGRE 314
                   V ++          + E+    +  G      KK     +   IT +   RE
Sbjct: 238 PGQVEGNIVFTYLDAFDPNKEEVEELKAHYRRGGLGDGTVKKRLEGVLKELITPIRERRE 297

Query: 315 EAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLT 354
           E  K     M+          + T   + DEV  G+GL  
Sbjct: 298 ELAKDPDYIMDVLRQGTDKCRIITQQ-TLDEVKDGLGLFK 336


>gi|320353891|ref|YP_004195230.1| RNA-binding S4 domain-containing protein [Desulfobulbus propionicus
           DSM 2032]
 gi|320122393|gb|ADW17939.1| RNA-binding S4 domain protein [Desulfobulbus propionicus DSM 2032]
          Length = 97

 Score = 41.3 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 10/57 (17%), Positives = 23/57 (40%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
           + L  L+ +     S  EAR  +    + +N  +   ++ +++  D  + G   L  
Sbjct: 23  IELDKLLKRENLTASGGEARYLISQGLVLVNGIVELRKRRKLRSGDVVTCGETTLRV 79


>gi|229168100|ref|ZP_04295828.1| Tryptophanyl-tRNA synthetase [Bacillus cereus AH621]
 gi|228615344|gb|EEK72441.1| Tryptophanyl-tRNA synthetase [Bacillus cereus AH621]
          Length = 332

 Score = 41.3 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 22/96 (22%), Positives = 33/96 (34%), Gaps = 17/96 (17%)

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLF 222
           L+ +  ++   + Y IL A D + L +     +   G DQ  +I    D+         F
Sbjct: 123 LEIDAGVNMGLYTYPILMAADIL-LFQATHVPV---GKDQIQHIEIARDIATYFN--HTF 176

Query: 223 ALTSPL-----------LTTASGTKMGKTLSGAIWL 247
             T  L           L    G KM K+    I L
Sbjct: 177 GTTFTLPEYVVQEEGAILPGLDGRKMSKSYGNVIPL 212


>gi|254502639|ref|ZP_05114790.1| conserved hypothetical protein, putative [Labrenzia alexandrii
           DFL-11]
 gi|222438710|gb|EEE45389.1| conserved hypothetical protein, putative [Labrenzia alexandrii
           DFL-11]
          Length = 498

 Score = 41.3 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 10/68 (14%), Positives = 29/68 (42%), Gaps = 3/68 (4%)

Query: 328 DMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNE 387
             +  +   P ++I   + + G  +  ++ +AG   S  EA   +    +++N  +++  
Sbjct: 39  SKADEAGDAPRVTIP--DTASGERIAKVMARAGLC-SRREAETWVMDGRVEVNGKVLTTP 95

Query: 388 KLQIKLQD 395
            + +   D
Sbjct: 96  AVTVTSND 103


>gi|218663826|ref|ZP_03519756.1| RNA-pseudouridine synthase protein, ribosomal large subunit B
           [Rhizobium etli IE4771]
          Length = 267

 Score = 41.3 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 8/54 (14%), Positives = 23/54 (42%), Gaps = 1/54 (1%)

Query: 340 SISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL 393
            ++ D   + + L   + K G+  S  +A R +    + ++   +++    + L
Sbjct: 15  KLTADAAGKRVTLPRALSKLGYC-SRTQAERLIAEGRVSVDGRTVNDPSAWVDL 67


>gi|210622352|ref|ZP_03293121.1| hypothetical protein CLOHIR_01069 [Clostridium hiranonis DSM 13275]
 gi|210154340|gb|EEA85346.1| hypothetical protein CLOHIR_01069 [Clostridium hiranonis DSM 13275]
          Length = 1039

 Score = 41.3 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 23/113 (20%), Positives = 40/113 (35%), Gaps = 19/113 (16%)

Query: 168 SLSFLEFNYMILQAYDFVELA-KNYDCRLQMGGSDQ---WGNIICGIDLGERLKTPKLFA 223
           S+ F + +Y      +F +L   +Y C     G DQ   W   +  I      K P    
Sbjct: 528 SMPFAQHHYPFENKENFDQLFPADYICE----GIDQTRGWFYSLLAISTFVMGKAPYKNV 583

Query: 224 LTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRL 276
           L + L+    G KM K+    +       +P+  +  +     AD + +    
Sbjct: 584 LVNDLVLDKDGKKMSKSRGNTV-------NPFELFDKY----GADALRWYLLY 625


>gi|196035461|ref|ZP_03102865.1| putative tryptophanyl-tRNA synthetase [Bacillus cereus W]
 gi|195991762|gb|EDX55726.1| putative tryptophanyl-tRNA synthetase [Bacillus cereus W]
          Length = 332

 Score = 41.3 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 22/96 (22%), Positives = 33/96 (34%), Gaps = 17/96 (17%)

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLF 222
           L+ +  ++   + Y IL A D + L +     +   G DQ  +I    D+         F
Sbjct: 123 LEVDAGVNMGLYTYPILMAADIL-LFQATHVPV---GKDQIQHIEIARDIATYFN--HTF 176

Query: 223 ALTSPL-----------LTTASGTKMGKTLSGAIWL 247
             T  L           L    G KM K+    I L
Sbjct: 177 GTTFTLPEYVIQEEGAILPGLDGRKMSKSYGNVIPL 212


>gi|161511025|ref|NP_979676.2| tryptophanyl-tRNA synthetase [Bacillus cereus ATCC 10987]
          Length = 332

 Score = 41.3 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 22/96 (22%), Positives = 33/96 (34%), Gaps = 17/96 (17%)

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLF 222
           L+ +  ++   + Y IL A D + L +     +   G DQ  +I    D+         F
Sbjct: 123 LEVDAGVNMGLYTYPILMAADIL-LFQATHVPV---GKDQIQHIEIARDIATYFN--HTF 176

Query: 223 ALTSPL-----------LTTASGTKMGKTLSGAIWL 247
             T  L           L    G KM K+    I L
Sbjct: 177 GTTFKLPEYVIQEEGAILPGLDGRKMSKSYGNVIPL 212


>gi|320593392|gb|EFX05801.1| tryptophanyl-tRNA synthetase [Grosmannia clavigera kw1407]
          Length = 446

 Score = 41.3 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 16/61 (26%), Positives = 20/61 (32%), Gaps = 1/61 (1%)

Query: 15  RGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +    L           Y G   ++ SLH GH   L    WLQ     P+  
Sbjct: 72  RGLFFSHRDFDRILTRYERGEPFFLYTGRGPSSGSLHLGHTIPLQFTKWLQDVFDVPLVF 131

Query: 74  M 74
           M
Sbjct: 132 M 132


>gi|291533003|emb|CBL06116.1| Tryptophanyl-tRNA synthetase [Megamonas hypermegale ART12/1]
          Length = 223

 Score = 41.3 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 39/228 (17%), Positives = 68/228 (29%), Gaps = 39/228 (17%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN 102
            T   LH GH    +     LQ +G      +     +I D      +      +++++N
Sbjct: 11  PTGR-LHIGHYVGSLKRRVELQNSGEFEKIFI-----MIADAQ--ALTDNADNPEKVRQN 62

Query: 103 IEKIKGIFSSFIKY-----GTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFE 157
           +          + Y        K+   + +    LC +    +     S    N  +  E
Sbjct: 63  V------LEVALDYLACGIDPKKSTIFVQSQIPQLCELTCYYMNLVTVSRLQRNPTVKSE 116

Query: 158 SVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK 217
                 +    + FL   Y + QA D           + +G  DQ   I    ++  R  
Sbjct: 117 IQMRNFEASIPVGFL--AYPVSQASDITAFKA---TTVPVG-EDQEPMIEQTREIVRRFN 170

Query: 218 ---TPKLFALTSPLLTTA---------SGT-KMGKTLSGAIWLNKEMT 252
                +       LL             G  KM K+L   I+L+ E  
Sbjct: 171 MLYNTETLVEPDILLPDNKACLRLPGIDGKAKMSKSLGNCIYLSDEAN 218


>gi|229060950|ref|ZP_04198304.1| Tryptophanyl-tRNA synthetase [Bacillus cereus AH603]
 gi|228718319|gb|EEL69953.1| Tryptophanyl-tRNA synthetase [Bacillus cereus AH603]
          Length = 332

 Score = 41.3 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 22/96 (22%), Positives = 33/96 (34%), Gaps = 17/96 (17%)

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLF 222
           L+ +  ++   + Y IL A D + L +     +   G DQ  +I    D+         F
Sbjct: 123 LEIDAGVNMGLYTYPILMAADIL-LFQATHVPV---GKDQIQHIEIARDIATYFN--HTF 176

Query: 223 ALTSPL-----------LTTASGTKMGKTLSGAIWL 247
             T  L           L    G KM K+    I L
Sbjct: 177 GTTFTLPEYVIQEEGAILPGLDGRKMSKSYGNVIPL 212


>gi|255323936|ref|ZP_05365062.1| tryptophan-tRNA ligase [Corynebacterium tuberculostearicum SK141]
 gi|311739950|ref|ZP_07713784.1| tryptophan--tRNA ligase [Corynebacterium pseudogenitalium ATCC
           33035]
 gi|255299116|gb|EET78407.1| tryptophan-tRNA ligase [Corynebacterium tuberculostearicum SK141]
 gi|311305023|gb|EFQ81092.1| tryptophan--tRNA ligase [Corynebacterium pseudogenitalium ATCC
           33035]
          Length = 341

 Score = 41.3 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 35/228 (15%), Positives = 73/228 (32%), Gaps = 35/228 (15%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   TA S H G+    +  +   + G+     +    +I                +E++
Sbjct: 14  GIQPTADSYHLGNYLGALKQWIDLQDGYDAFYFIPDLHAIT----------VEQNPEELR 63

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLS-FESV 159
                      +       K+   + ++      + +  +L+ +  F   +RM    +  
Sbjct: 64  NRTIAGAAQLIALG-IDPEKSTLFVQSHVPAHAELTW--VLQCLTGFGEASRMTQFKDKS 120

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             +     S+    F Y IL A D +  + +Y   + +G  DQ  ++    +L ER    
Sbjct: 121 AKQGSDRTSVGL--FTYPILMASDILLYSPDY---VPVG-EDQRQHLELTRNLAERFNNK 174

Query: 220 KLFALTSPLLT--TASGT-----------KMGKTLSGAIWLNKEMTSP 254
             +  T  +       G            KM K+ +    L   + +P
Sbjct: 175 --YGETFKVPEPFIPEGAAKIYDLQEPTSKMSKSGANPKGLVNLLDAP 220


>gi|325474143|gb|EGC77331.1| tryptophanyl-tRNA synthetase [Treponema denticola F0402]
          Length = 357

 Score = 41.3 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 35/243 (14%), Positives = 66/243 (27%), Gaps = 41/243 (16%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGH--KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +     LQ +G   +   ++    +   +    ++ R  +    + 
Sbjct: 11  PTGK-LHIGHYVGSLKNRVALQNSGKYDEIYIMIADAQATTDNADNLEKVRASVIEVALD 69

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
                I    S+ +          +      L ++  ++                   ++
Sbjct: 70  YLACGIDPQKSTILVQTQIPELCELTFYYMNLVTLARLE-----------RNPTVKNEIK 118

Query: 161 SR-------LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQW---------- 203
            R             +      Y I QA D      N    + +G  DQ           
Sbjct: 119 LRGFNIGANAGGNTGIPVGFLTYPISQAADITAFLAN---TVPVG-EDQMPMIEQTREIV 174

Query: 204 --GNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYW 261
              N + G  L E  +          L  T    KM K+L   I+++    SP    +  
Sbjct: 175 RSFNSLYGETLVEPKELLPANKTCGRLPGTDGKAKMSKSLGNCIYIS---DSPEEIKKKV 231

Query: 262 RNI 264
             +
Sbjct: 232 MGM 234


>gi|115961012|ref|XP_001180784.1| PREDICTED: hypothetical protein, partial [Strongylocentrotus
           purpuratus]
          Length = 410

 Score = 41.3 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 19/68 (27%), Positives = 25/68 (36%), Gaps = 4/68 (5%)

Query: 174 FNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTAS 233
             Y  LQA D   L        Q GG DQ            +L   K   L +P++   +
Sbjct: 82  LLYPGLQALDEEYLK----VDAQFGGVDQRKIFTFAEKYMPQLGYAKRIHLMNPMVPGLT 137

Query: 234 GTKMGKTL 241
           GTKM  + 
Sbjct: 138 GTKMSSSE 145


>gi|327188583|gb|EGE55793.1| tryptophanyl-tRNA synthetase protein [Rhizobium etli CNPAF512]
          Length = 354

 Score = 41.3 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 60/377 (15%), Positives = 119/377 (31%), Gaps = 94/377 (24%)

Query: 31  CSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDES 90
            S+     + G   T + LH G+    +  F   + G+  I  +    +           
Sbjct: 1   MSEFKKLVFSGVQPTGN-LHLGNYLGAIRRFVALQEGNDCIYCVVDMHA----------- 48

Query: 91  RRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFS- 149
              + +Q + E++       ++         +  ++ N++ +     +  +    +    
Sbjct: 49  ---LTAQLVHEDMPSQTRSIAAAFIAAGIDPEKHIVFNQSAVPQHAELAWIFNCVARIGW 105

Query: 150 VNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICG 209
           +NRM  F+    + + + SL    + Y  L A D + + +     +   G DQ  ++   
Sbjct: 106 MNRMTQFKDKAGKDREQASLGL--YAYPSLMAADIL-VYRATHVPV---GEDQKQHLELA 159

Query: 210 IDLG-------------------ERLKTPKLFA---LTSPLLTTA--------SGT-KMG 238
            D+                      +    + A   +  PL+            GT KM 
Sbjct: 160 RDIAMKFNLDYAQHIARTGYGIDITVGDEPVHAYFPMVEPLIGGPAPRVMSLRDGTKKMS 219

Query: 239 KTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEA 298
           K+             P +       +DD D +S                     K+I +A
Sbjct: 220 KS------------DPSDL-SRINLMDDEDAIS---------------------KKIRKA 245

Query: 299 KKI---IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTL 355
           K     + +EI  +  GR EA+          D S  S+ +      +  V +   L+ L
Sbjct: 246 KTDPDGLPSEIDGL-QGRPEADNLVAIYAALADKS-KSEVLAEFGGHQFSVFKPA-LVDL 302

Query: 356 IVKAGFATSTNEARRHL 372
            +    A  T E RR +
Sbjct: 303 AIHV-LAPITGEMRRLM 318


>gi|326387186|ref|ZP_08208796.1| pseudouridine synthase, Rsu [Novosphingobium nitrogenifigens DSM
           19370]
 gi|326208367|gb|EGD59174.1| pseudouridine synthase, Rsu [Novosphingobium nitrogenifigens DSM
           19370]
          Length = 316

 Score = 41.3 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 21/44 (47%), Gaps = 1/44 (2%)

Query: 348 RGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
            G  +  L+ +AG A S  +  R +    IK+N+ +++     +
Sbjct: 74  EGERIAKLLARAGIA-SRRDVERMIGEGRIKLNDELVTTPATLL 116


>gi|292659842|pdb|3M5W|A Chain A, Crystal Structure Of Tryptophanyl-Trna Synthetase From
           Campylobacter Jejuni
 gi|292659843|pdb|3M5W|B Chain B, Crystal Structure Of Tryptophanyl-Trna Synthetase From
           Campylobacter Jejuni
          Length = 322

 Score = 41.3 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 33/215 (15%), Positives = 58/215 (26%), Gaps = 32/215 (14%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   +   LH G+    +      +   +    +    +           +  +      
Sbjct: 9   GLQPSGD-LHIGNYFGAIKQXVDAQEKSQXFXFIANYHAXTSSQDGEKLKQNSL-KAAAA 66

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETW-LCSIKYIDLLREIGSFFSVNRMLSFESV 159
                I    S F      K    +     W L       LL    S+         + V
Sbjct: 67  FLSLGIDPQKSVFWLQSDVKEVXELY----WILSQFTPXGLLERAHSY--------KDKV 114

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
              L     L    F+Y +L A D +     +D R+   G DQ  ++    D+  ++   
Sbjct: 115 AKGLSASHGL----FSYPVLXAADILL----FDTRIVPVGKDQIQHVEIARDIALKVNNE 166

Query: 220 KLFALTSP---------LLTTASGTKMGKTLSGAI 245
                T P         ++    G K  K+    I
Sbjct: 167 WGEIFTLPEARVNEEVAVVVGTDGAKXSKSYQNTI 201


>gi|123965898|ref|YP_001010979.1| tryptophanyl-tRNA synthetase [Prochlorococcus marinus str. MIT
           9515]
 gi|123200264|gb|ABM71872.1| Tryptophanyl-tRNA synthetase [Prochlorococcus marinus str. MIT
           9515]
          Length = 347

 Score = 41.3 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 37/216 (17%), Positives = 82/216 (37%), Gaps = 37/216 (17%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   T   LH G+    +  +   +  H+    +    +I  +   +  SR  + +  + 
Sbjct: 19  GVQPTGD-LHIGNWLGAINNWVALQEKHETFLCVVDLHAITTEYDPKQLSRNTLSTAALY 77

Query: 101 ENIEKIKGIFSSFIK-YGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
                   I S F++   +  ++   + N   +  I +++            RM+ F+  
Sbjct: 78  VACGIDPKICSIFVQSQISAHSELCWILNC--MTPINWME------------RMIQFKE- 122

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER---- 215
              +++  ++S   F+Y IL A D +    +Y   + +G  DQ  ++    D+ ++    
Sbjct: 123 -KSVQQGNNVSIGLFDYPILMAADILLYDADY---VPVG-EDQKQHLELARDIAQQRINA 177

Query: 216 --------LKTPKLFAL--TSPLLTTASG-TKMGKT 240
                   LK P+   +   S +++   G  KM K+
Sbjct: 178 KFSKKKNILKIPQPIIMKKGSKIMSLNDGSKKMSKS 213


>gi|254525127|ref|ZP_05137182.1| pseudouridylate synthase [Stenotrophomonas sp. SKA14]
 gi|219722718|gb|EED41243.1| pseudouridylate synthase [Stenotrophomonas sp. SKA14]
          Length = 240

 Score = 41.3 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 22/41 (53%), Gaps = 1/41 (2%)

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
           GL  ++ KAG   S +EA R +    ++++  I+ + +  I
Sbjct: 4   GLARVLSKAGVC-SRSEAARWIAEGRVRVSGRIVRDPEFPI 43


>gi|312871289|ref|ZP_07731387.1| tryptophan--tRNA ligase [Lactobacillus iners LEAF 3008A-a]
 gi|312872640|ref|ZP_07732705.1| tryptophan--tRNA ligase [Lactobacillus iners LEAF 2062A-h1]
 gi|315654039|ref|ZP_07906955.1| tryptophan--tRNA ligase [Lactobacillus iners ATCC 55195]
 gi|311091682|gb|EFQ50061.1| tryptophan--tRNA ligase [Lactobacillus iners LEAF 2062A-h1]
 gi|311093303|gb|EFQ51649.1| tryptophan--tRNA ligase [Lactobacillus iners LEAF 3008A-a]
 gi|315488735|gb|EFU78381.1| tryptophan--tRNA ligase [Lactobacillus iners ATCC 55195]
          Length = 339

 Score = 41.3 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 34/225 (15%), Positives = 73/225 (32%), Gaps = 39/225 (17%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     LQ +G + P  ++    ++       D +R        ++
Sbjct: 11  PTGK-LHIGHYIGSLKNRVKLQNSGEYDPYIMIADTQAL------TDNARNP------EK 57

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNR-MLSFESVR 160
               +  +   ++  G     + +          +      ++ +   + R       ++
Sbjct: 58  IKNSLIQVALDYLAVGLDPEKSTIFVQSQIPALFELTAYFMDLVTVARLQRNPTVKNEIK 117

Query: 161 SR-LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
            +       + FL  NY + QA D       +   +   G DQ   +    ++     + 
Sbjct: 118 QKGFNDSLPIGFL--NYPVSQAADITA----FKASIIPVGDDQEPMLEQTREIVRTFNS- 170

Query: 220 KLFA---LTSPL----------LTTASGT-KMGKTLSGAIWLNKE 250
            ++    L  P           L    G  KM K+L+ AI+L+ +
Sbjct: 171 -VYGKEILVEPKGYFPPKGHGRLPGIDGNAKMSKSLNNAIYLSDD 214


>gi|146305929|ref|YP_001186394.1| tryptophanyl-tRNA synthetase [Pseudomonas mendocina ymp]
 gi|145574130|gb|ABP83662.1| tryptophanyl-tRNA synthetase [Pseudomonas mendocina ymp]
          Length = 448

 Score = 41.3 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 24/108 (22%), Positives = 40/108 (37%), Gaps = 20/108 (18%)

Query: 156 FESVRSRLKREQ----SLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGID 211
             SV   L++ +     ++   F+Y +L A D +        ++ +G  DQ  ++    D
Sbjct: 112 KASVDKNLEQGEDPDAGVTMGLFSYPVLMAADILMFNAQ---KVPVG-RDQIQHVEMARD 167

Query: 212 LGERLK-----TPKLFAL-------TSPLLTTASGTKMGKTLSGAIWL 247
           +G+R          LF L           L    G KM K+    I L
Sbjct: 168 IGQRFNHLFGKGKDLFVLPEVVIEEEVATLPGLDGRKMSKSYDNTIPL 215


>gi|86609348|ref|YP_478110.1| S4 domain-containing protein [Synechococcus sp. JA-2-3B'a(2-13)]
 gi|86557890|gb|ABD02847.1| S4 domain protein [Synechococcus sp. JA-2-3B'a(2-13)]
          Length = 87

 Score = 41.3 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 8/51 (15%), Positives = 26/51 (50%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG 400
           + L   +  AG A +  +A++ +++  +++N  + +    +++  D  + G
Sbjct: 21  IKLDQFLKLAGVAPTGGQAKQLIQAGQVRVNGEVETRRGRKLRSGDEVAVG 71


>gi|325295032|ref|YP_004281546.1| pseudouridine synthase Rsu [Desulfurobacterium thermolithotrophum
           DSM 11699]
 gi|325065480|gb|ADY73487.1| pseudouridine synthase Rsu [Desulfurobacterium thermolithotrophum
           DSM 11699]
          Length = 238

 Score = 41.3 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 11/56 (19%), Positives = 24/56 (42%), Gaps = 3/56 (5%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ--DFDSTGNIK 403
           M L  L+  +GF  + ++ +R +K   + +N   I +    +  Q  +    G + 
Sbjct: 1   MRLDKLLADSGF-GTRSQVKRLIKKGFVTVNGETIKDPSFNVDPQKDEVLVDGELV 55


>gi|319784272|ref|YP_004143748.1| RNA-binding S4 domain protein [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
 gi|317170160|gb|ADV13698.1| RNA-binding S4 domain protein [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
          Length = 670

 Score = 41.3 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 8/47 (17%), Positives = 20/47 (42%), Gaps = 1/47 (2%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
           +   + +AG A S  +A   + +  +K+N   +++    +   D   
Sbjct: 224 IAKRLARAGLA-SRRDAEELIAAGRVKVNGRALTSPAFNVMPDDIIH 269


>gi|315221610|ref|ZP_07863530.1| tryptophan--tRNA ligase [Streptococcus anginosus F0211]
 gi|315189444|gb|EFU23139.1| tryptophan--tRNA ligase [Streptococcus anginosus F0211]
          Length = 341

 Score = 41.3 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 48/287 (16%), Positives = 83/287 (28%), Gaps = 56/287 (19%)

Query: 44  LTASSLHAGHLTQ-LMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN 102
            T   LH GH    L     LQ  G   + +       + D     +  +    + I E+
Sbjct: 12  PTGK-LHIGHYVGSLRNRVLLQDEGKYELFVF------LADQQALTDHAK--DPKTIVES 62

Query: 103 IEKIK-GIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
           I  +     ++ +     KT   + +    L  +    +     +    N  +  E  + 
Sbjct: 63  IGNVALDYLAAGLD--PEKTTLFIQSQIPELSELSMYYMNLVSLARLERNPTVKSEIAQK 120

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP-- 219
                    FL   Y I QA D      NY   + +G +DQ   I    ++         
Sbjct: 121 GFGESIPTGFL--VYPIAQAADITAFKANY---VPVG-NDQKPMIEQTREIVRSFNHTYN 174

Query: 220 -----------KLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDAD 268
                              L       KM K+L+  I+L+ +M              D  
Sbjct: 175 CDVLVEPEGIYPQNEAAGRLPGLDGNAKMSKSLNNGIYLSDDM--------------DTL 220

Query: 269 VVSFAKRLTTLPMSEIDRMAKLQG----------KEINEAKKIIATE 305
                   T     +I+   K++G              +A+KI A +
Sbjct: 221 QKKVMSMYTDPDHIKIEDPGKIEGNMVFHYLDVFGRPEDARKITAMK 267


>gi|304394150|ref|ZP_07376073.1| heat shock protein 15 [Ahrensia sp. R2A130]
 gi|303293590|gb|EFL87967.1| heat shock protein 15 [Ahrensia sp. R2A130]
          Length = 132

 Score = 41.3 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 7/63 (11%), Positives = 23/63 (36%), Gaps = 7/63 (11%)

Query: 336 MPTIS-ISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
           MP    + +  V + +    ++     A+S       ++   +++N   +++    +   
Sbjct: 1   MPDFETLPRLRVDKWLWFCRVVKTRSLASS------LIRGGGVRLNGERVASPSRAVVAD 54

Query: 395 DFD 397
           D  
Sbjct: 55  DVL 57


>gi|119511719|ref|ZP_01630823.1| Hemolysin A [Nodularia spumigena CCY9414]
 gi|119463628|gb|EAW44561.1| Hemolysin A [Nodularia spumigena CCY9414]
          Length = 270

 Score = 41.3 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 7/41 (17%), Positives = 19/41 (46%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
           TL+V     +S   A+R +++  + +N  ++     ++   
Sbjct: 8   TLLVDLNLCSSRALAQRLIQAGEVTVNQQVVDKAGTEVDTA 48


>gi|16078207|ref|NP_389024.1| tryptophanyl-tRNA synthetase [Bacillus subtilis subsp. subtilis
           str. 168]
 gi|221308982|ref|ZP_03590829.1| tryptophanyl-tRNA synthetase [Bacillus subtilis subsp. subtilis
           str. 168]
 gi|221313307|ref|ZP_03595112.1| tryptophanyl-tRNA synthetase [Bacillus subtilis subsp. subtilis
           str. NCIB 3610]
 gi|221318231|ref|ZP_03599525.1| tryptophanyl-tRNA synthetase [Bacillus subtilis subsp. subtilis
           str. JH642]
 gi|221322505|ref|ZP_03603799.1| tryptophanyl-tRNA synthetase [Bacillus subtilis subsp. subtilis
           str. SMY]
 gi|135188|sp|P21656|SYW_BACSU RecName: Full=Tryptophanyl-tRNA synthetase; AltName:
           Full=Tryptophan--tRNA ligase; Short=TrpRS
 gi|143786|gb|AAA22874.1| tryptophanyl-tRNA synthetase (EC 6.1.1.2) [Bacillus subtilis]
 gi|2633496|emb|CAB12999.1| tryptophanyl-tRNA synthetase [Bacillus subtilis subsp. subtilis
           str. 168]
          Length = 330

 Score = 41.3 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 47/298 (15%), Positives = 93/298 (31%), Gaps = 46/298 (15%)

Query: 35  VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMM 94
             T + G   +  S+  G+    M  F   +  +     +    + I  P  R E R+  
Sbjct: 2   KQTIFSGIQPSG-SVTLGNYIGAMKQFVELQHDYNSYFCIVDQHA-ITVPQDRLELRK-- 57

Query: 95  RSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRML 154
                      I+ + + ++  G     A +          +   +++ +     + RM 
Sbjct: 58  ----------NIRNLAALYLAVGLDPEKATLFIQSEVPAHAQAGWMMQCVAYIGELERMT 107

Query: 155 SFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
                + + K  +++      Y  L A D +     Y   L   G DQ  ++    +L E
Sbjct: 108 Q---FKDKSKGNEAVVSGLLTYPPLMAADILL----YGTDLVPVGEDQKQHLELTRNLAE 160

Query: 215 RLKTPKLFALTSPLLTTAS-G----------TKMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
           R         T P +     G           KM K+          +  P    +  ++
Sbjct: 161 RFNKKYNDIFTIPEVKIPKVGARIMSLNDPLKKMSKSDPNQKAYITLLDEPKQLEKKIKS 220

Query: 264 -IDDAD------------VVSFAKRLTTLPMSEIDR-MAKLQGKEINEAKKIIATEIT 307
            + D++            V +     + L  + I+   AK +GK   E K  +A  + 
Sbjct: 221 AVTDSEGIVKFDKENKPGVSNLLTIYSILGNTTIEELEAKYEGKGYGEFKGDLAEVVV 278


>gi|319953065|ref|YP_004164332.1| tryptophanyl-tRNA synthetase [Cellulophaga algicola DSM 14237]
 gi|319421725|gb|ADV48834.1| tryptophanyl-tRNA synthetase [Cellulophaga algicola DSM 14237]
          Length = 322

 Score = 41.3 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 26/115 (22%), Positives = 41/115 (35%), Gaps = 17/115 (14%)

Query: 144 IGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQW 203
           +  FF   R+    S + +  R + ++   F+Y +L A D +     YD  +   G DQ 
Sbjct: 95  LSCFFPYQRLTLAHSFKDKADRLEDVNAGLFSYPMLMAADILL----YDANIVPVGKDQL 150

Query: 204 GNIICGIDLGERLKTPKLFALTSPL-----------LTTASGTKMGKTLSGAIWL 247
            +I    D+  R         T  L           +    G KM K+    I L
Sbjct: 151 QHIEMTRDVASRFH--AQMGETFVLPEGKIQEETKYVPGTDGDKMSKSKGNLISL 203


>gi|254423526|ref|ZP_05037244.1| photosystem II S4 domain protein [Synechococcus sp. PCC 7335]
 gi|196191015|gb|EDX85979.1| photosystem II S4 domain protein [Synechococcus sp. PCC 7335]
          Length = 259

 Score = 41.3 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 13/71 (18%), Positives = 26/71 (36%), Gaps = 6/71 (8%)

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDST-GNIKLSFG---- 407
           L  +  AGF  S ++    +    +++N   ++     ++  D  +  G  +L  G    
Sbjct: 186 LDALASAGFGMSRSKMADMITGGDVRVNWKPVTQASQTLQPGDLVAIRGKGRLEVGEMAV 245

Query: 408 -KKNHIICHLC 417
            KK      L 
Sbjct: 246 TKKQRYRVQLT 256


>gi|305665732|ref|YP_003862019.1| tryptophanyl-tRNA synthetase [Maribacter sp. HTCC2170]
 gi|88710492|gb|EAR02724.1| tryptophanyl-tRNA synthetase [Maribacter sp. HTCC2170]
          Length = 322

 Score = 41.3 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 31/164 (18%), Positives = 51/164 (31%), Gaps = 27/164 (16%)

Query: 144 IGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQW 203
           +  FF   R+    S + +  R + ++   F Y +L A D +     YD  +   G DQ 
Sbjct: 95  LSCFFPYQRLTLAHSFKDKADRLEDVNAGLFTYPMLMAADILL----YDANIVPVGKDQL 150

Query: 204 GNIICGIDLGERLK----------TPKLFALTSPLLTTASGTKMGKTLSG--AIWLNKEM 251
            +I    D+  R              K+   T   +    G KM K+      I+   + 
Sbjct: 151 QHIEMTRDVASRFHAQLGEVFVVPEGKVHEETM-YIPGTDGQKMSKSKGNLINIFQPDKK 209

Query: 252 TSPYNFWQYWRNIDDAD--------VVSFAKRLTTLPMSEIDRM 287
                      +    D        V +  K L      +I  M
Sbjct: 210 LRKQIMGIKTDSTPMEDPKNPETDNVFALYKILA--SPEQIAEM 251


>gi|238021224|ref|ZP_04601650.1| hypothetical protein GCWU000324_01122 [Kingella oralis ATCC 51147]
 gi|237868204|gb|EEP69210.1| hypothetical protein GCWU000324_01122 [Kingella oralis ATCC 51147]
          Length = 78

 Score = 41.3 bits (96), Expect = 0.28,   Method: Composition-based stats.
 Identities = 11/65 (16%), Positives = 28/65 (43%), Gaps = 2/65 (3%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF--DSTGNI 402
           E    + L  L+  AG A S  +A+  + +  ++ N +  + +  +I+  +        +
Sbjct: 8   EDQDHIALCDLLKLAGLAESGGQAKALIAAGQVQRNGATETRKTAKIRAGEIITLHGNEL 67

Query: 403 KLSFG 407
           ++  G
Sbjct: 68  EIQAG 72


>gi|115738407|ref|XP_783144.2| PREDICTED: hypothetical protein, partial [Strongylocentrotus
           purpuratus]
          Length = 365

 Score = 41.3 bits (96), Expect = 0.28,   Method: Composition-based stats.
 Identities = 19/68 (27%), Positives = 25/68 (36%), Gaps = 4/68 (5%)

Query: 174 FNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTAS 233
             Y  LQA D   L        Q GG DQ            +L   K   L +P++   +
Sbjct: 37  LLYPGLQALDEEYLK----VDAQFGGVDQRKIFTFAEKYMPQLGYAKRIHLMNPMVPGLT 92

Query: 234 GTKMGKTL 241
           GTKM  + 
Sbjct: 93  GTKMSSSE 100


>gi|225620831|ref|YP_002722089.1| pseudouridine synthase [Brachyspira hyodysenteriae WA1]
 gi|225215651|gb|ACN84385.1| pseudouridine synthase [Brachyspira hyodysenteriae WA1]
          Length = 359

 Score = 41.3 bits (96), Expect = 0.28,   Method: Composition-based stats.
 Identities = 15/75 (20%), Positives = 36/75 (48%), Gaps = 1/75 (1%)

Query: 341 ISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG 400
           + K +    + L+ +I+++GFA S     + + S  +++NN +I +   ++K  D  S  
Sbjct: 1   MKKQQNEEAVRLVKVILESGFA-SRRNCEKAIMSGRVRVNNQVILDPAYRVKEDDSVSID 59

Query: 401 NIKLSFGKKNHIICH 415
              +    K ++  +
Sbjct: 60  RELIKRQTKRYMALY 74


>gi|182412027|ref|YP_001817093.1| ribosomal protein S4 [Opitutus terrae PB90-1]
 gi|226699097|sp|B1ZNC4|RS4_OPITP RecName: Full=30S ribosomal protein S4
 gi|177839241|gb|ACB73493.1| ribosomal protein S4 [Opitutus terrae PB90-1]
          Length = 203

 Score = 41.3 bits (96), Expect = 0.28,   Method: Composition-based stats.
 Identities = 13/82 (15%), Positives = 29/82 (35%), Gaps = 3/82 (3%)

Query: 320 ATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKI 379
                  F+++   + +      +   +R   ++ L+   G A S   AR+ +    I++
Sbjct: 65  ERQFRRVFEIAKKERGVTGERFLQLLETRLDSVVYLL---GLAKSRAAARQFVNHGHIRV 121

Query: 380 NNSIISNEKLQIKLQDFDSTGN 401
           N   +      +K  D     N
Sbjct: 122 NGHKVDIASYNVKAGDEIEVKN 143


>gi|296114351|ref|ZP_06833005.1| RNA-binding S4 domain protein [Gluconacetobacter hansenii ATCC
           23769]
 gi|295979112|gb|EFG85836.1| RNA-binding S4 domain protein [Gluconacetobacter hansenii ATCC
           23769]
          Length = 258

 Score = 41.3 bits (96), Expect = 0.28,   Method: Composition-based stats.
 Identities = 8/55 (14%), Positives = 21/55 (38%), Gaps = 1/55 (1%)

Query: 342 SKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
                  G  +   + ++G   S  +A R ++   +++N  I+ +    +   D 
Sbjct: 7   PAPTTPHGDRIAKWLGRSG-VASRRDAERMIEEGRVRLNGDIVRHPATFVSDGDI 60


>gi|75910708|ref|YP_325004.1| hemolysin A [Anabaena variabilis ATCC 29413]
 gi|75704433|gb|ABA24109.1| Hemolysin A [Anabaena variabilis ATCC 29413]
          Length = 272

 Score = 41.3 bits (96), Expect = 0.28,   Method: Composition-based stats.
 Identities = 7/41 (17%), Positives = 19/41 (46%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
            L+V+     S   A+R +++  + +N  +I     ++ + 
Sbjct: 8   NLLVELNLCNSRTLAQRLIQAGEVTVNEQVIDKPGTEVDVA 48


>gi|225010381|ref|ZP_03700853.1| tryptophanyl-tRNA synthetase [Flavobacteria bacterium MS024-3C]
 gi|225005860|gb|EEG43810.1| tryptophanyl-tRNA synthetase [Flavobacteria bacterium MS024-3C]
          Length = 325

 Score = 41.3 bits (96), Expect = 0.29,   Method: Composition-based stats.
 Identities = 24/113 (21%), Positives = 39/113 (34%), Gaps = 13/113 (11%)

Query: 144 IGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQW 203
           +  FF   R+    S + +  R + ++   F+Y +L A D +     YD      G DQ 
Sbjct: 95  LSCFFPYQRLTLAHSFKDKSDRLEDVNAGLFSYPMLMAADILA----YDAHFVPVGKDQL 150

Query: 204 GNIICGIDLGERLKTPKLFALTSP---------LLTTASGTKMGKTLSGAIWL 247
            ++    D+  R           P          +    G KM K+    I L
Sbjct: 151 QHLEMTRDVAARFHAKLGDTFVLPEAKVQESSMYVPGTDGGKMSKSKGNTIDL 203


>gi|169830463|ref|YP_001716445.1| RNA-binding S4 domain-containing protein [Candidatus Desulforudis
           audaxviator MP104C]
 gi|226732175|sp|B1I1B2|RS4_DESAP RecName: Full=30S ribosomal protein S4
 gi|169637307|gb|ACA58813.1| RNA-binding S4 domain protein [Candidatus Desulforudis audaxviator
           MP104C]
          Length = 208

 Score = 41.3 bits (96), Expect = 0.29,   Method: Composition-based stats.
 Identities = 10/48 (20%), Positives = 21/48 (43%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
            +I + G   S  EAR+ ++    K+N   +     Q+++ D  +   
Sbjct: 102 NVIYRLGLGASRAEARQLVRHGHFKVNGRKVDIPSYQVRVGDVIAVRE 149


>gi|300813634|ref|ZP_07093962.1| isoleucine--tRNA ligase [Peptoniphilus sp. oral taxon 836 str.
           F0141]
 gi|300512270|gb|EFK39442.1| isoleucine--tRNA ligase [Peptoniphilus sp. oral taxon 836 str.
           F0141]
          Length = 1033

 Score = 41.3 bits (96), Expect = 0.29,   Method: Composition-based stats.
 Identities = 25/126 (19%), Positives = 44/126 (34%), Gaps = 20/126 (15%)

Query: 155 SFESVRSRLKREQSLSFLEFNYMILQAYDFVELA-KNYDCRLQMGGSDQ---WGNIICGI 210
             + +        S+ F +++Y      +F EL   ++ C     G DQ   W   +  I
Sbjct: 511 EKDVIDVWFDSG-SMPFAQWHYPFENKDNFDELFPADFICE----GIDQTRGWFYSLLAI 565

Query: 211 DLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVV 270
                 K+P    L + L+    G KM K+    +        P+  +  +     ADVV
Sbjct: 566 STYMTGKSPYKNVLVNDLILDKEGKKMSKSRGNTVA-------PFELFDKY----GADVV 614

Query: 271 SFAKRL 276
            +    
Sbjct: 615 RWYLLY 620


>gi|296101071|ref|YP_003611217.1| tryptophanyl-tRNA synthetase II [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
 gi|295055530|gb|ADF60268.1| tryptophanyl-tRNA synthetase II [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
          Length = 333

 Score = 41.3 bits (96), Expect = 0.29,   Method: Composition-based stats.
 Identities = 36/226 (15%), Positives = 63/226 (27%), Gaps = 27/226 (11%)

Query: 34  GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRM 93
              T   G   T   LH GH    +      +  H    L+     +  + S   + R  
Sbjct: 2   NPQTILTGDRPTGP-LHLGHFVGSLRQRVALQQTHNQFVLIADLQGLTDNGSNPQKIRDN 60

Query: 94  MRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRM 153
           +           I              T   + +    L  +  + +     +    N  
Sbjct: 61  ISEVLADYLAAGI----------DPNLTTICLQSALPALAELTMLYMNIVTVARVERNPT 110

Query: 154 LSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLG 213
           +  E  +    R   + F    Y I QA D        +C     G DQ   I    ++ 
Sbjct: 111 VKNEIAQKGFARSLPVGF--MAYPISQAADITAFKA--ECV--PVGDDQLPMIEQTNEIV 164

Query: 214 ERLKT----------PKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
            ++ +            + + TS L       KM K+L   + L+ 
Sbjct: 165 HKMNSLLPAPVLRHCKAMLSDTSRLPGIDGSAKMSKSLGNTLHLSA 210


>gi|282882605|ref|ZP_06291224.1| isoleucine--tRNA ligase [Peptoniphilus lacrimalis 315-B]
 gi|281297580|gb|EFA90057.1| isoleucine--tRNA ligase [Peptoniphilus lacrimalis 315-B]
          Length = 1033

 Score = 41.3 bits (96), Expect = 0.29,   Method: Composition-based stats.
 Identities = 25/126 (19%), Positives = 44/126 (34%), Gaps = 20/126 (15%)

Query: 155 SFESVRSRLKREQSLSFLEFNYMILQAYDFVELA-KNYDCRLQMGGSDQ---WGNIICGI 210
             + +        S+ F +++Y      +F EL   ++ C     G DQ   W   +  I
Sbjct: 511 EKDVIDVWFDSG-SMPFAQWHYPFENKDNFDELFPADFICE----GIDQTRGWFYSLLAI 565

Query: 211 DLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVV 270
                 K+P    L + L+    G KM K+    +        P+  +  +     ADVV
Sbjct: 566 STYMTGKSPYKNVLVNDLILDKEGKKMSKSRGNTVA-------PFELFDKY----GADVV 614

Query: 271 SFAKRL 276
            +    
Sbjct: 615 RWYLLY 620


>gi|25027252|ref|NP_737306.1| tryptophanyl-tRNA synthetase [Corynebacterium efficiens YS-314]
 gi|259506611|ref|ZP_05749513.1| tryptophan--tRNA ligase [Corynebacterium efficiens YS-314]
 gi|39932212|sp|Q8FRR3|SYW_COREF RecName: Full=Tryptophanyl-tRNA synthetase; AltName:
           Full=Tryptophan--tRNA ligase; Short=TrpRS
 gi|23492533|dbj|BAC17506.1| putative tryptophanyl-tRNA synthetase [Corynebacterium efficiens
           YS-314]
 gi|259165809|gb|EEW50363.1| tryptophan--tRNA ligase [Corynebacterium efficiens YS-314]
          Length = 346

 Score = 41.3 bits (96), Expect = 0.29,   Method: Composition-based stats.
 Identities = 36/240 (15%), Positives = 72/240 (30%), Gaps = 33/240 (13%)

Query: 28  DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFR 87
           +   +Q       G   TA S H G+    +  +   +  +     +    +I  D    
Sbjct: 6   NDHTAQTPARVLSGIQPTADSYHLGNYLGAVKQWIDLQNSYDAFYFIPDLHAITVD---- 61

Query: 88  DESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSF 147
                    +E++           +       ++   + ++      + +  +L  +  F
Sbjct: 62  ------QNPEELRARTVSGAAQLLALG-IDPERSTLFVQSHIPAHAELSW--VLTCLTGF 112

Query: 148 FSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNII 207
              +RM  F+  +S  +  +  S   F Y +L A D + L +     +   G DQ  ++ 
Sbjct: 113 GEASRMTQFKD-KSTKQGAERTSAGLFTYPMLMAADIL-LYRPQLVPV---GEDQRQHLE 167

Query: 208 CGIDLGERLKTPKLFALTSPLLTT--ASG-----------TKMGKTLSGAIWLNKEMTSP 254
               L ER      F     +       G            KM K+      L   +  P
Sbjct: 168 LTRTLAERFNNR--FGTVFEVPEGFIPEGASKIYDLQNPTAKMSKSGENPKGLINLLDDP 225


>gi|325201528|gb|ADY96982.1| S4 RNA-binding domain protein [Neisseria meningitidis M01-240149]
          Length = 77

 Score = 41.3 bits (96), Expect = 0.29,   Method: Composition-based stats.
 Identities = 11/58 (18%), Positives = 24/58 (41%)

Query: 340 SISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
           +I   E +  + L  L+  AG A S  +A+  +    +  N    + +  +I+  +  
Sbjct: 3   AIVYLEDNEYIALCDLLKLAGLAESGGQAKALIAEGLVSRNGETETCKTAKIRGGEVI 60


>gi|212538099|ref|XP_002149205.1| 30S ribosomal subunit  S4, putative [Penicillium marneffei ATCC
           18224]
 gi|210068947|gb|EEA23038.1| 30S ribosomal subunit S4, putative [Penicillium marneffei ATCC
           18224]
          Length = 439

 Score = 41.3 bits (96), Expect = 0.29,   Method: Composition-based stats.
 Identities = 13/69 (18%), Positives = 31/69 (44%), Gaps = 2/69 (2%)

Query: 328 DMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNE 387
             ++  +  P  +++   + R + +   I +A FA+ST +AR+ +   A+ +N   +   
Sbjct: 102 GKTLTPKRTPYTNMTFAPLERRLDVA--IFRAMFASSTRQARQFVVHGAVTVNGKKMQFP 159

Query: 388 KLQIKLQDF 396
              +   D 
Sbjct: 160 GYLLNPGDL 168


>gi|254562144|ref|YP_003069239.1| lysyl tRNA synthetase [Methylobacterium extorquens DM4]
 gi|254269422|emb|CAX25388.1| lysyl tRNA synthetase [Methylobacterium extorquens DM4]
          Length = 582

 Score = 41.3 bits (96), Expect = 0.29,   Method: Composition-based stats.
 Identities = 19/154 (12%), Positives = 42/154 (27%), Gaps = 7/154 (4%)

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            D+           +M G D   ++     +   L           L     G K+ K+ 
Sbjct: 259 PDWAMRWVALGVDYEMAGKDLIDSVKLSGQIARALGAEPPEGFNYELFLDEKGQKISKSK 318

Query: 242 SGAIWLNK--EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK-EINEA 298
              + +++     +P +   +  N          +    +    +D      G+    EA
Sbjct: 319 GNGLTIDEWLTYATPESLALFMYNKP----REAKRLFFDVIPRNVDEYDNFLGRFAGQEA 374

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIH 332
           K  +   +  +  G   A +    A       + 
Sbjct: 375 KHRLGNPVWHLHAGEPPAVETIDEAGTTLSFGML 408


>gi|297587185|ref|ZP_06945830.1| isoleucine--tRNA ligase [Finegoldia magna ATCC 53516]
 gi|297575166|gb|EFH93885.1| isoleucine--tRNA ligase [Finegoldia magna ATCC 53516]
          Length = 1035

 Score = 41.3 bits (96), Expect = 0.29,   Method: Composition-based stats.
 Identities = 20/81 (24%), Positives = 26/81 (32%), Gaps = 14/81 (17%)

Query: 199 GSDQ---WGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPY 255
           G DQ   W   +  I      K P    L + L+    G KM K+    I        P 
Sbjct: 553 GIDQTRGWFYSLLAISTMITGKAPYKNVLVNDLILDKDGKKMSKSRGNTI-------DPI 605

Query: 256 NFWQYWRNIDDADVVSFAKRL 276
             +  +     ADVV F    
Sbjct: 606 ELFDKY----GADVVRFYSLY 622


>gi|154488635|ref|ZP_02029484.1| hypothetical protein BIFADO_01942 [Bifidobacterium adolescentis
           L2-32]
 gi|154082772|gb|EDN81817.1| hypothetical protein BIFADO_01942 [Bifidobacterium adolescentis
           L2-32]
          Length = 238

 Score = 41.3 bits (96), Expect = 0.29,   Method: Composition-based stats.
 Identities = 9/50 (18%), Positives = 22/50 (44%), Gaps = 2/50 (4%)

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDST--GNIKLSFG 407
           G   S ++A+R +    + +N   ++    ++   D  +   G+  +S G
Sbjct: 5   GLTDSRSKAQRLIADGKVSVNGVTVTKASAKVGGDDVIAADRGDGYVSRG 54


>gi|325695752|gb|EGD37651.1| tryptophan--tRNA ligase [Streptococcus sanguinis SK150]
 gi|328945166|gb|EGG39321.1| tryptophan--tRNA ligase [Streptococcus sanguinis SK1087]
          Length = 341

 Score = 41.3 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 42/232 (18%), Positives = 63/232 (27%), Gaps = 48/232 (20%)

Query: 44  LTASSLHAGHLTQ-LMLLFWLQKTGHKPISLM----GGGTSIIGDPSFRDESRRMMRSQE 98
            T   LH GH    L     LQ  G   + +        T    DP              
Sbjct: 12  PTGK-LHIGHYVGSLRNRVLLQDQGKYEMFVFLADQQALTDHAKDPQ------------- 57

Query: 99  IQENIEKIKGIFSSFIK--YGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSF 156
               +E I  +   ++       K    + +    L  +    +     +    N  +  
Sbjct: 58  --TIVESIGNVALDYLAAGLDPEKVTIFIQSQIPELAELSMYYMNLVSLARLERNPTVKT 115

Query: 157 ESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL 216
           E  +          FL   Y I QA D      NY   + +G  DQ   I    ++    
Sbjct: 116 EIAQKGFGESLPTGFL--VYPISQAADITAFKANY---VPVG-HDQKPMIEQTREIVRSF 169

Query: 217 KTPKLFALTSPL---------------LTTASGT-KMGKTLSGAIWLNKEMT 252
                   T  L               L    G  KM K+L+  I+L  +M 
Sbjct: 170 NNAYQ---TDVLVEPEGIYPENEAAGRLPGLDGNAKMSKSLNNGIYLADDMD 218


>gi|303234548|ref|ZP_07321185.1| isoleucine--tRNA ligase [Finegoldia magna BVS033A4]
 gi|302494382|gb|EFL54151.1| isoleucine--tRNA ligase [Finegoldia magna BVS033A4]
          Length = 1035

 Score = 41.3 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 20/81 (24%), Positives = 26/81 (32%), Gaps = 14/81 (17%)

Query: 199 GSDQ---WGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPY 255
           G DQ   W   +  I      K P    L + L+    G KM K+    I        P 
Sbjct: 553 GIDQTRGWFYSLLAISTMITGKAPYKNVLVNDLILDKDGKKMSKSRGNTI-------DPI 605

Query: 256 NFWQYWRNIDDADVVSFAKRL 276
             +  +     ADVV F    
Sbjct: 606 ELFDKY----GADVVRFYSLY 622


>gi|302379745|ref|ZP_07268230.1| isoleucine--tRNA ligase [Finegoldia magna ACS-171-V-Col3]
 gi|302312652|gb|EFK94648.1| isoleucine--tRNA ligase [Finegoldia magna ACS-171-V-Col3]
          Length = 1035

 Score = 41.3 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 20/81 (24%), Positives = 26/81 (32%), Gaps = 14/81 (17%)

Query: 199 GSDQ---WGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPY 255
           G DQ   W   +  I      K P    L + L+    G KM K+    I        P 
Sbjct: 553 GIDQTRGWFYSLLAISTMITGKAPYKNVLVNDLILDKDGKKMSKSRGNTI-------DPI 605

Query: 256 NFWQYWRNIDDADVVSFAKRL 276
             +  +     ADVV F    
Sbjct: 606 ELFDKY----GADVVRFYSLY 622


>gi|238879875|gb|EEQ43513.1| conserved hypothetical protein [Candida albicans WO-1]
          Length = 461

 Score = 41.3 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 49/123 (39%), Gaps = 15/123 (12%)

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSR-GMGLLT--- 354
           +K  A   T   HG++  EK        FD ++ +      S+   +V+   + L T   
Sbjct: 44  QKWAAKTETRNYHGQQIKEK--RFKNVLFDSNLKTYSQLDASLKGHDVAPTPITLQTYGT 101

Query: 355 -------LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF--DSTGNIKLS 405
                   + ++ FA+S  +AR+ +    +K+N  +I +    ++  D        +  +
Sbjct: 102 LEKRLEIALFRSMFASSVRQARQFILGGYVKVNGVVIKHPSFPLQSGDVFSVDPEKVLFA 161

Query: 406 FGK 408
            GK
Sbjct: 162 LGK 164


>gi|68476945|ref|XP_717450.1| likely mitochondrial ribosomal protein S4 [Candida albicans SC5314]
 gi|68477136|ref|XP_717361.1| likely mitochondrial ribosomal protein S4 [Candida albicans SC5314]
 gi|46439070|gb|EAK98392.1| likely mitochondrial ribosomal protein S4 [Candida albicans SC5314]
 gi|46439163|gb|EAK98484.1| likely mitochondrial ribosomal protein S4 [Candida albicans SC5314]
          Length = 461

 Score = 41.3 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 49/123 (39%), Gaps = 15/123 (12%)

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSR-GMGLLT--- 354
           +K  A   T   HG++  EK        FD ++ +      S+   +V+   + L T   
Sbjct: 44  QKWAAKTETRNYHGQQIKEK--RFKNVLFDSNLKTYSQLDASLKGHDVAPTPITLQTYGT 101

Query: 355 -------LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF--DSTGNIKLS 405
                   + ++ FA+S  +AR+ +    +K+N  +I +    ++  D        +  +
Sbjct: 102 LEKRLEIALFRSMFASSVRQARQFILGGYVKVNGVVIKHPSFPLQSGDVFSVDPEKVLFA 161

Query: 406 FGK 408
            GK
Sbjct: 162 LGK 164


>gi|260424785|ref|ZP_05733291.2| ribosomal small subunit pseudouridine synthase A [Dialister invisus
           DSM 15470]
 gi|260403192|gb|EEW96739.1| ribosomal small subunit pseudouridine synthase A [Dialister invisus
           DSM 15470]
          Length = 277

 Score = 41.3 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 6/32 (18%), Positives = 16/32 (50%)

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           +  E +R ++  A+++N   I++    +   D
Sbjct: 31  TRTELKRDIRKGAVQVNGEKITDPGFMVNEND 62


>gi|240139731|ref|YP_002964208.1| lysyl tRNA synthetase [Methylobacterium extorquens AM1]
 gi|240009705|gb|ACS40931.1| lysyl tRNA synthetase [Methylobacterium extorquens AM1]
          Length = 582

 Score = 41.3 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 19/154 (12%), Positives = 42/154 (27%), Gaps = 7/154 (4%)

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            D+           +M G D   ++     +   L           L     G K+ K+ 
Sbjct: 259 PDWAMRWVALGVDYEMAGKDLIDSVKLSGQIARALGAEPPEGFNYELFLDEKGQKISKSK 318

Query: 242 SGAIWLNK--EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK-EINEA 298
              + +++     +P +   +  N          +    +    +D      G+    EA
Sbjct: 319 GNGLTIDEWLTYATPESLALFMYNKP----REAKRLFFDVIPRNVDEYDNFLGRFAGQEA 374

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIH 332
           K  +   +  +  G   A +    A       + 
Sbjct: 375 KHRLGNPVWHLHAGEPPAVETIDEAGTTLSFGML 408


>gi|241958516|ref|XP_002421977.1| mitochondrial ribosome protein precursor, small subunit [Candida
           dubliniensis CD36]
 gi|223645322|emb|CAX39978.1| mitochondrial ribosome protein precursor, small subunit [Candida
           dubliniensis CD36]
          Length = 461

 Score = 41.3 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 49/123 (39%), Gaps = 15/123 (12%)

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSR-GMGLLT--- 354
           +K  A   T   HG++  EK        FD ++ +      S+   +V+   + L T   
Sbjct: 44  QKWAAKTETRNYHGQQIKEK--RFKNVLFDSNLKTYSQLDASLKGHDVAPTPITLQTYGT 101

Query: 355 -------LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF--DSTGNIKLS 405
                   + ++ FA+S  +AR+ +    +K+N  +I +    ++  D        +  +
Sbjct: 102 LEKRLEIALFRSMFASSVRQARQFILGGYVKVNGVVIKHPSFPLQSGDVFSVDPEKVLFA 161

Query: 406 FGK 408
            GK
Sbjct: 162 LGK 164


>gi|212540450|ref|XP_002150380.1| tryptophanyl-tRNA synthetase [Penicillium marneffei ATCC 18224]
 gi|210067679|gb|EEA21771.1| tryptophanyl-tRNA synthetase [Penicillium marneffei ATCC 18224]
          Length = 447

 Score = 41.3 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 14/60 (23%), Positives = 22/60 (36%), Gaps = 1/60 (1%)

Query: 15  RGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +  + LD   +      Y G   ++ +LH GH        WLQ     P+ +
Sbjct: 81  RGLFFSHRDFDKILDRYEAGEPFFMYTGRGPSSDALHLGHTIPFSFTKWLQDVFDVPLVI 140


>gi|169824801|ref|YP_001692412.1| isoleucyl-tRNA synthetase [Finegoldia magna ATCC 29328]
 gi|167831606|dbj|BAG08522.1| isoleucyl-tRNA synthetase [Finegoldia magna ATCC 29328]
          Length = 1035

 Score = 41.3 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 20/81 (24%), Positives = 26/81 (32%), Gaps = 14/81 (17%)

Query: 199 GSDQ---WGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPY 255
           G DQ   W   +  I      K P    L + L+    G KM K+    I        P 
Sbjct: 553 GIDQTRGWFYSLLAISTMITGKAPYKNVLVNDLILDKDGKKMSKSRGNTI-------DPI 605

Query: 256 NFWQYWRNIDDADVVSFAKRL 276
             +  +     ADVV F    
Sbjct: 606 ELFDKY----GADVVRFYSLY 622


>gi|52079640|ref|YP_078431.1| tryptophanyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|52785003|ref|YP_090832.1| tryptophanyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|52002851|gb|AAU22793.1| tryptophanyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|52347505|gb|AAU40139.1| TrpS [Bacillus licheniformis ATCC 14580]
          Length = 330

 Score = 41.3 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 52/345 (15%), Positives = 103/345 (29%), Gaps = 64/345 (18%)

Query: 35  VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMM 94
             T + G   +  S+  G+    M  F   +  +     +    + I  P  R   R+  
Sbjct: 2   KKTIFSGIQPSG-SVTLGNYIGAMKQFVDLQDDYNCYFCIVDQHA-ITVPQDRLALRK-- 57

Query: 95  RSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRML 154
                      I+ + + ++  G     A +          +   +L+ +     + RM 
Sbjct: 58  ----------NIRNLAALYLAIGLDPKKATLFIQSEVPAHAQAGWMLQCVAYIGELERMT 107

Query: 155 SFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
                + +   ++++      Y  L A D +     Y   +   G DQ  ++    +L E
Sbjct: 108 Q---YKDKSAGKEAVVSGLLTYPPLMAADILL----YGTDVVPVGEDQKQHLELTRNLAE 160

Query: 215 RLKTPKLFALTSPLLTTAS-G----------TKMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
           R         T P +     G           KM K+          +  P    +  ++
Sbjct: 161 RFNKKYNDIFTVPEVKIPKVGARIMSLADPLKKMSKSDPNQKAFITLLDEPKQLEKKIKS 220

Query: 264 -IDDAD------------VVSFAKRLTTLPMSEIDR-MAKLQGKEINEAKKIIATEIT-- 307
            + D+D            V +     + L  + I+   AK +GK   E K  +A  +   
Sbjct: 221 AVTDSDGIVKYDKENKPGVSNLLTIYSILGQASIEELEAKYEGKGYGEFKSDLAEVVIGA 280

Query: 308 -----TMVHG-----------REEAEKAATAAMECFDMSIHSQHM 336
                   H             E AE+A   A +      ++  +
Sbjct: 281 LKPIQDRYHELIESEELDRILDEGAERANQTANKMLKKMENAMGL 325


>gi|153855760|ref|ZP_01996761.1| hypothetical protein DORLON_02779 [Dorea longicatena DSM 13814]
 gi|149751887|gb|EDM61818.1| hypothetical protein DORLON_02779 [Dorea longicatena DSM 13814]
          Length = 236

 Score = 41.3 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 38/222 (17%), Positives = 70/222 (31%), Gaps = 32/222 (14%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGH--KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +     LQ +G   +   ++    ++  +    ++ R+ + +  + 
Sbjct: 11  PTGR-LHVGHYVGSLKERVKLQNSGEYDEIYIMIADAQALTDNAEHPEKVRQNIMNVALD 69

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
                I             K    + +    L  + +  +     S    N  +  E  +
Sbjct: 70  YLACGI----------DPEKCHIFIQSMVPELTELTFYYMNLVTVSRVQRNPTVKAEIQQ 119

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
              +    + F  F Y I QA D           + +G  DQ   I    ++  +  +  
Sbjct: 120 RNFEASIPVGF--FCYPISQAADITAFRA---TTVPVG-EDQMPMIEQCKEIVHKFNSVY 173

Query: 221 LFALTSP-----------LLTTASGT-KMGKTLSGAIWLNKE 250
              LT P            L    G  KM K+L   I+L+ E
Sbjct: 174 GETLTEPEIVLPSNKSCLRLPGIDGKAKMSKSLGNCIYLSDE 215


>gi|325207507|gb|ADZ02959.1| S4 RNA-binding domain protein [Neisseria meningitidis NZ-05/33]
          Length = 77

 Score = 41.3 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 11/58 (18%), Positives = 24/58 (41%)

Query: 340 SISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
           +I   E +  + L  L+  AG A S  +A+  +    +  N    + +  +I+  +  
Sbjct: 3   AIVYLEDNEYIALCDLLKLAGLAESGGQAKALIAEGLVSRNGETETRKTAKIRGGEVI 60


>gi|291517698|emb|CBK71314.1| tryptophanyl-tRNA synthetase [Bifidobacterium longum subsp. longum
           F8]
          Length = 360

 Score = 41.3 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 34/256 (13%), Positives = 74/256 (28%), Gaps = 42/256 (16%)

Query: 22  SNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSI 80
           S+     +       T   G   T   LH GH    +     +Q+ G     ++      
Sbjct: 25  SDETLAKLEAKPSSFTMLTGDRPTGR-LHLGHYFGSIRERVAMQERGVNTNIIIADY--- 80

Query: 81  IGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY----GTGKTDALMLNNETWLCSIK 136
                      +++  ++  E+I+    + +  + Y           +  ++     +  
Sbjct: 81  -----------QVITDRDTTEHIQ--DNVLNLVLDYMAAGIDPNKTMMFTHSAVPAENQL 127

Query: 137 YIDLLREIGSFFSVNRMLSFESVRSRLK-REQSLSFLEFNYMILQAYDFVELAKNYDCRL 195
            +  L  +             +V+S ++    +L+ L   Y + QA D   L    +   
Sbjct: 128 LLPFLSLVTEAELHRNP----TVKSEMEASGHALTGLLLTYPVHQACD--ILFCKANVV- 180

Query: 196 QMGGSDQWGNIICGIDLGERLKT----------PKLFALT-SPLLTTASGTKMGKTLSGA 244
              G D   ++     +  R                  L+ +P +    G KM K+   +
Sbjct: 181 -PIGKDNLPHVEITRTIARRFNERYAKKNPVFPEPAAILSEAPEIPGLDGRKMSKSYGNS 239

Query: 245 IWLNKEMTSPYNFWQY 260
           I L           + 
Sbjct: 240 IMLGATAEETAKLIKK 255


>gi|282880895|ref|ZP_06289588.1| pseudouridylate synthase [Prevotella timonensis CRIS 5C-B1]
 gi|281305277|gb|EFA97344.1| pseudouridylate synthase [Prevotella timonensis CRIS 5C-B1]
          Length = 253

 Score = 41.3 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 11/60 (18%), Positives = 28/60 (46%), Gaps = 1/60 (1%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +  AG   S  EA   +++  +K+N  +++    ++   D     +  +S  KK +++ +
Sbjct: 24  LANAGVC-SRREADEFIQAGVVKVNGEVVTELGTKVLRSDEVVFHDQPVSLEKKVYVLLN 82


>gi|262191779|ref|ZP_06049952.1| tryptophanyl-tRNA synthetase [Vibrio cholerae CT 5369-93]
 gi|262032357|gb|EEY50922.1| tryptophanyl-tRNA synthetase [Vibrio cholerae CT 5369-93]
          Length = 340

 Score = 41.3 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 36/220 (16%), Positives = 69/220 (31%), Gaps = 33/220 (15%)

Query: 45  TASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIE 104
           T   LH GH    +      +  H+   L+     +  +            S  I   + 
Sbjct: 20  TGP-LHLGHYVGSLKQRVALQEIHEQTILVADMQGLTDNAH-----NPKKVSSNILNVVA 73

Query: 105 KIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK 164
               +          KT   + +    L  +          +  +++R+    +V+S ++
Sbjct: 74  DYLAVG-----IDPTKTTICLQSQLPALAELTMY-----YSNLVTISRLDRNPTVKSEIQ 123

Query: 165 R---EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK---T 218
               E+S+      Y I QA D       ++  L   G DQ   +    ++  ++     
Sbjct: 124 NKGFERSIPAGFLTYPISQAADI----TGFNATLVPVGDDQLPMLEQANEIVRKVNSLAG 179

Query: 219 PKLFALTSPLLTT------ASGT-KMGKTLSGAIWLNKEM 251
             +     PLL+         G  KM K++  AI L    
Sbjct: 180 RNVLNDCRPLLSNASRLPSTDGKSKMSKSMGNAINLGASP 219


>gi|254785351|ref|YP_003072780.1| tryptophanyl-tRNA synthetase [Teredinibacter turnerae T7901]
 gi|237684720|gb|ACR11984.1| tryptophan--tRNA ligase [Teredinibacter turnerae T7901]
          Length = 334

 Score = 41.3 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 32/174 (18%), Positives = 55/174 (31%), Gaps = 35/174 (20%)

Query: 156 FESVRSRLKREQ----SLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGID 211
             +V   ++  +     ++   ++Y +L A D +    N    + +G  DQ  ++    D
Sbjct: 113 KAAVAKNVEEGEDPDFGITMGLYSYPVLMAADILMFNAN---TVPVG-KDQIQHVEMARD 168

Query: 212 LGERLKTPKLFALTSP---------LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWR 262
           +  R           P         +L    G KM K+ +  I L      P    +   
Sbjct: 169 IAARFNHHFAEVFVLPEAQVDDNVAVLQGLDGRKMSKSYNNTIPL----FLPEKQLKKHI 224

Query: 263 NI--------------DDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKII 302
           N               DD+ V    +   +   S   R    QG    EAKK +
Sbjct: 225 NKIKTNLLEPGDPKDPDDSTVFQVWQAFASEEKSVYMREQFAQGIAWGEAKKQL 278


>gi|126663357|ref|ZP_01734355.1| ribosomal large subunit pseudouridine synthase F [Flavobacteria
           bacterium BAL38]
 gi|126625015|gb|EAZ95705.1| ribosomal large subunit pseudouridine synthase F [Flavobacteria
           bacterium BAL38]
          Length = 262

 Score = 41.3 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 9/59 (15%), Positives = 19/59 (32%), Gaps = 2/59 (3%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLS 405
                +   + + GF  S  EA R ++   + IN   +     ++   D        + 
Sbjct: 3   ENATRINKFLSETGFC-SRREADRLIEQGRVTING-KVPEMGTKVTPSDEVRVNGKLIQ 59


>gi|90420290|ref|ZP_01228198.1| RNA-binding S4 domain protein [Aurantimonas manganoxydans SI85-9A1]
 gi|90335624|gb|EAS49374.1| RNA-binding S4 domain protein [Aurantimonas manganoxydans SI85-9A1]
          Length = 143

 Score = 41.3 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 9/62 (14%), Positives = 22/62 (35%), Gaps = 4/62 (6%)

Query: 349 GMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD----STGNIKL 404
           G  +   +  A    S + A++ +++  ++IN     N    ++  D          + L
Sbjct: 17  GQRIDKWLFFARVVKSRSLAQKLVQAGGVRINGDKTDNAARAVRPGDTLTIARRDEILVL 76

Query: 405 SF 406
             
Sbjct: 77  KI 78


>gi|294678028|ref|YP_003578643.1| ribosomal large subunit pseudouridine synthase B [Rhodobacter
           capsulatus SB 1003]
 gi|294476848|gb|ADE86236.1| ribosomal large subunit pseudouridine synthase B [Rhodobacter
           capsulatus SB 1003]
          Length = 594

 Score = 41.3 bits (96), Expect = 0.31,   Method: Composition-based stats.
 Identities = 11/61 (18%), Positives = 27/61 (44%), Gaps = 4/61 (6%)

Query: 335 HMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
             P  +++ D   R   +  +I ++G   S  +A + + +  + +N   + +  L +K  
Sbjct: 6   ETPAQTLTADTAER---IAKVIARSG-VASRRDAEKMILAGRVTVNGKKVDSPALDVKPA 61

Query: 395 D 395
           D
Sbjct: 62  D 62


>gi|238495494|ref|XP_002378983.1| tryptophanyl-tRNA synthetase [Aspergillus flavus NRRL3357]
 gi|317149666|ref|XP_001823576.2| tryptophan--tRNA ligase WRS1 [Aspergillus oryzae RIB40]
 gi|220695633|gb|EED51976.1| tryptophanyl-tRNA synthetase [Aspergillus flavus NRRL3357]
          Length = 433

 Score = 41.3 bits (96), Expect = 0.31,   Method: Composition-based stats.
 Identities = 13/48 (27%), Positives = 18/48 (37%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLM 74
           LD          Y G   ++ S+H GH        WLQ     P+ +M
Sbjct: 97  LDRYEKGQPFYLYTGRGPSSDSMHVGHTIPFEFTKWLQDVFDCPLVIM 144


>gi|84499929|ref|ZP_00998195.1| Tryptophanyl-tRNA synthetase, class Ib [Oceanicola batsensis
           HTCC2597]
 gi|84391863|gb|EAQ04131.1| Tryptophanyl-tRNA synthetase, class Ib [Oceanicola batsensis
           HTCC2597]
          Length = 333

 Score = 41.3 bits (96), Expect = 0.31,   Method: Composition-based stats.
 Identities = 38/218 (17%), Positives = 68/218 (31%), Gaps = 29/218 (13%)

Query: 45  TASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIE 104
           T   LH GH    +      +  H    L+    ++  +    ++ RR +    +     
Sbjct: 13  TGP-LHIGHYAGSLANRLRYQDSHDQFLLLADTQALTDNAHDPEKVRRSVIEVALDYLAV 71

Query: 105 KIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-L 163
            I            G+T   + ++   L  +  +  L  +            + +R+R  
Sbjct: 72  GI----------DPGRTTICLQSHLPALAELSML-YLNFVTVARLERNPTIKDEIRARGF 120

Query: 164 KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT----- 218
            R+    FL   Y   QA D       +   +   G DQ   I    ++  R+       
Sbjct: 121 GRDIPAGFL--CYPAAQAADITA----FRATVVPVGEDQAPLIEQTNEIVRRINAMTDRA 174

Query: 219 --PKLFALTSPL--LTTASGT-KMGKTLSGAIWLNKEM 251
             P+  A+      L    G  KM K+   AI L+   
Sbjct: 175 VLPEARAIIPRTGRLPGIDGKAKMSKSGGNAIALSASP 212


>gi|291279397|ref|YP_003496232.1| ribosomal small subunit pseudouridine synthase A [Deferribacter
           desulfuricans SSM1]
 gi|290754099|dbj|BAI80476.1| ribosomal small subunit pseudouridine synthase A [Deferribacter
           desulfuricans SSM1]
          Length = 239

 Score = 41.3 bits (96), Expect = 0.31,   Method: Composition-based stats.
 Identities = 14/49 (28%), Positives = 24/49 (48%)

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           S  EA R +++  + +N  +I+N   +  + D       KL F KK +I
Sbjct: 22  SRREADRLIQNGFVLVNGVVITNPAEKFSINDHVVVNGEKLDFNKKVYI 70


>gi|282163383|ref|YP_003355768.1| hypothetical protein MCP_0713 [Methanocella paludicola SANAE]
 gi|282155697|dbj|BAI60785.1| conserved hypothetical protein [Methanocella paludicola SANAE]
          Length = 215

 Score = 41.3 bits (96), Expect = 0.32,   Method: Composition-based stats.
 Identities = 9/57 (15%), Positives = 22/57 (38%), Gaps = 7/57 (12%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK-------LQDFDSTGNIKLS 405
           +V  G   S + A+R ++   +K++   +     +++         +    G  KL 
Sbjct: 7   LVSEGLVPSRSRAKRLIEKGQVKVDGKAVLKPSQKVEYGRKVAIEGEDMPEGYFKLK 63


>gi|72161417|ref|YP_289074.1| 30S ribosomal protein S4 [Thermobifida fusca YX]
 gi|90101732|sp|Q47R66|RS4_THEFY RecName: Full=30S ribosomal protein S4
 gi|71915149|gb|AAZ55051.1| SSU ribosomal protein S4P [Thermobifida fusca YX]
          Length = 203

 Score = 41.3 bits (96), Expect = 0.32,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 24/55 (43%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
              + L T++++AGFA S   AR+ +    I ++   +     Q+K     S   
Sbjct: 89  ELELRLATVLLRAGFAASIYAARQFINHGHITVDGKKVDIPSYQVKPGQIVSVRE 143


>gi|65318840|ref|ZP_00391799.1| COG1187: 16S rRNA uridine-516 pseudouridylate synthase and related
           pseudouridylate synthases [Bacillus anthracis str.
           A2012]
          Length = 242

 Score = 41.3 bits (96), Expect = 0.32,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 1/53 (1%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           L  +I +AG A S  +A   ++   +K+N  I+     ++  QD     NI L
Sbjct: 4   LQKVIAQAGIA-SRRKAEELIQQGKVKVNGKIVKELGTKVTPQDKVEVNNIPL 55


>gi|294010813|ref|YP_003544273.1| tryptophanyl-tRNA synthetase [Sphingobium japonicum UT26S]
 gi|292674143|dbj|BAI95661.1| tryptophanyl-tRNA synthetase [Sphingobium japonicum UT26S]
          Length = 334

 Score = 41.3 bits (96), Expect = 0.32,   Method: Composition-based stats.
 Identities = 39/220 (17%), Positives = 71/220 (32%), Gaps = 44/220 (20%)

Query: 41  GYDLTASSLHAGHLT-QLMLLFWLQK---TGHKPISLMGGG---TSIIGDPSFRDESRRM 93
           G   T + LH G+    +     +Q    +  +    +      T   G        R  
Sbjct: 6   GIQPTGN-LHLGNYLGAIRNWVRMQDEMDSQSQCFFFLADMHSITVHEGREQRIRNVRD- 63

Query: 94  MRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRM 153
           M +  +   I+  + +  +  +         +LN       I ++            NRM
Sbjct: 64  MAAALVAAGIDPDRSVLFNQARVPAHAELCWLLN---GTARIGWL------------NRM 108

Query: 154 LS-FESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL 212
               + V       +  S   F Y +LQA D +     +   + +G  DQ  ++    D+
Sbjct: 109 TQFKDKVGK---DREGASIGLFVYPVLQAADILVYNATH---VPVG-EDQKQHLELARDI 161

Query: 213 GERLKTP---KLFALTSPLLTT--------ASGT-KMGKT 240
             +  T    +LF L  P++            GT KM K+
Sbjct: 162 ATKFNTDFGVELFTLPDPIIPKESARIMSLRDGTAKMSKS 201


>gi|239618278|ref|YP_002941600.1| hemolysin A [Kosmotoga olearia TBF 19.5.1]
 gi|239507109|gb|ACR80596.1| hemolysin A [Kosmotoga olearia TBF 19.5.1]
          Length = 268

 Score = 41.3 bits (96), Expect = 0.32,   Method: Composition-based stats.
 Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 9/64 (14%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIIS--------NEKLQI-KLQDFDSTG 400
           + L  L+V   F +S + A   +K   + IN  I+         + K++I  L+D+   G
Sbjct: 5   LRLDELLVARNFFSSRSRASDIIKQGKVSINGKIVKKPGKKVPLDIKIEINDLKDYVGRG 64

Query: 401 NIKL 404
            +KL
Sbjct: 65  YLKL 68


>gi|198274200|ref|ZP_03206732.1| hypothetical protein BACPLE_00340 [Bacteroides plebeius DSM 17135]
 gi|198272875|gb|EDY97144.1| hypothetical protein BACPLE_00340 [Bacteroides plebeius DSM 17135]
          Length = 364

 Score = 41.3 bits (96), Expect = 0.32,   Method: Composition-based stats.
 Identities = 38/231 (16%), Positives = 66/231 (28%), Gaps = 44/231 (19%)

Query: 44  LTASSLHAGHLTQLMLLFW---LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH      L     LQ +G      +            +  +  +   ++++
Sbjct: 13  PTGK-LHIGHYVG--SLRRRVELQNSGLYDKIFVFEA-------DGQALTDNIENPEKVR 62

Query: 101 ENIEKIKGIFSSFIKY-----GTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLS 155
           +N+          + Y        K+   + +    L  + +   +  +           
Sbjct: 63  QNV------IEVALDYLAAGLDPAKSTIFIQSQIPELYELSFY-FMDLVTVSRLQRNPTV 115

Query: 156 FESVRSR-LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQ------------ 202
              ++ R  +    + F  F Y I QA D           + +G  DQ            
Sbjct: 116 KTEIQMRNFETSIPVGF--FTYPISQAADIAAFKA---TTVPVG-EDQEPMIEQTREIVR 169

Query: 203 WGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTS 253
             N I G  L E        A    L  T    KM K+L   I+L+     
Sbjct: 170 RFNHIYGETLVEPEILLPDNAACLRLPGTDGKAKMSKSLGNCIYLSDSADE 220


>gi|161751105|ref|NP_376017.2| tryptophanyl-tRNA synthetase [Sulfolobus tokodaii str. 7]
 gi|20178130|sp|Q976M1|SYW_SULTO RecName: Full=Tryptophanyl-tRNA synthetase; AltName:
           Full=Tryptophan--tRNA ligase; Short=TrpRS
          Length = 381

 Score = 41.3 bits (96), Expect = 0.32,   Method: Composition-based stats.
 Identities = 47/265 (17%), Positives = 81/265 (30%), Gaps = 35/265 (13%)

Query: 6   SDFLSILSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSL--HAGHLTQLMLLFW 62
           +D L ++  R       +    L           Y G    A SL  H GHL   +   W
Sbjct: 43  NDELHVMLRRDVFFSHRDLDLVLKDYQDGKGFFLYTG---RAPSLGMHIGHLIPFIFTKW 99

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD 122
           LQ   +  + +      I  D  F           + ++            I  G     
Sbjct: 100 LQDKFNVNLYI-----EITDDEKFMRN--PEYTLDQTRQWA---YDNILDIIAVGFNPDK 149

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
             +  +  ++ ++  I           + + L+F  VR+    + S +     Y  LQ  
Sbjct: 150 TFIFQDTEYIRNMYPI--------AIKIAKKLTFSEVRATFGLDTSSNIGIIWYPALQ-- 199

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGE---RLKTPKLFALTSPLLTTASGTKMGK 239
               + +   C +  G  DQ        D+ E     K  ++ +   P LT   G KM  
Sbjct: 200 IAPTMFEKRRCLIPAG-IDQDPYWRLQRDIAESLGYYKAAQIHSKFLPPLTGPEG-KMSS 257

Query: 240 TLSG-AIWLNKEMTSPYNFWQYWRN 263
           +    AI+L  +   P    +    
Sbjct: 258 SQPETAIYLTDD---PKTVERKIMK 279


>gi|313125802|ref|YP_004036072.1| SSU ribosomal protein s4e [Halogeometricum borinquense DSM 11551]
 gi|312292167|gb|ADQ66627.1| SSU ribosomal protein S4E [Halogeometricum borinquense DSM 11551]
          Length = 236

 Score = 41.3 bits (96), Expect = 0.32,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 1/53 (1%)

Query: 347 SRGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
             G+ LL L+    G+  +  EAR  L  + + +N   IS+E+  I + D  +
Sbjct: 34  EAGVPLLILLRDVLGYVDNKKEARYALNQDGVLVNGDAISDEQRPIGMFDILA 86


>gi|225027595|ref|ZP_03716787.1| hypothetical protein EUBHAL_01852 [Eubacterium hallii DSM 3353]
 gi|224955111|gb|EEG36320.1| hypothetical protein EUBHAL_01852 [Eubacterium hallii DSM 3353]
          Length = 353

 Score = 41.3 bits (96), Expect = 0.32,   Method: Composition-based stats.
 Identities = 37/224 (16%), Positives = 69/224 (30%), Gaps = 32/224 (14%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGH--KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +     LQ +G   +   ++    ++  +    ++ R+ +    + 
Sbjct: 11  PTGR-LHVGHYVGSLSERVRLQNSGDYDEIYIMIADAQALTDNAEHPEKVRQNIIQVALD 69

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
                I             K+   + +    L  + +  +     +    N  +  E   
Sbjct: 70  YLACGI----------DPEKSTIFIQSMVPELTELTFYYMNLVTVARVQRNPTVKSEIKM 119

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
              +    + F  F Y I QA D     +     +   G DQ   I    ++  +  +  
Sbjct: 120 RNFEASIPVGF--FCYPISQAADITA-FRATTVPV---GEDQMPMIEQCKEIVHKFNSVY 173

Query: 221 LFALTSPL-----------LTTASGT-KMGKTLSGAIWLNKEMT 252
              LT P            L    G  KM K+L   I+L+ E  
Sbjct: 174 GETLTDPQIVLPSNKACLRLPGIDGKAKMSKSLGNCIYLSDEAD 217


>gi|192289766|ref|YP_001990371.1| RNA-binding S4 domain protein [Rhodopseudomonas palustris TIE-1]
 gi|192283515|gb|ACE99895.1| RNA-binding S4 domain protein [Rhodopseudomonas palustris TIE-1]
          Length = 736

 Score = 41.3 bits (96), Expect = 0.32,   Method: Composition-based stats.
 Identities = 10/56 (17%), Positives = 21/56 (37%), Gaps = 1/56 (1%)

Query: 342 SKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
                  G  +  ++ +AG   S  +A   +    + +N  +I +  L +K  D  
Sbjct: 402 PAKSDKAGERIAKVVARAGLC-SRRDAEAWITEGRVTVNGKVIDSPALDVKASDVI 456


>gi|163744706|ref|ZP_02152066.1| tryptophanyl-tRNA synthetase [Oceanibulbus indolifex HEL-45]
 gi|161381524|gb|EDQ05933.1| tryptophanyl-tRNA synthetase [Oceanibulbus indolifex HEL-45]
          Length = 338

 Score = 41.3 bits (96), Expect = 0.32,   Method: Composition-based stats.
 Identities = 43/253 (16%), Positives = 77/253 (30%), Gaps = 46/253 (18%)

Query: 37  TAYIGYDLTASSLHAGHLTQLMLLFWL---QKTGHKPISLMGGGTSII--GDPSFRDESR 91
             + G   +   LH G+      L      Q+ G + I  M    +I     P    +S 
Sbjct: 9   RVFSGIQPSGD-LHLGNYLG--ALKRFADAQEQGVQSIYCMVDLHAITVPQKPEDLKKST 65

Query: 92  RMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVN 151
           R + +  I   I+  K I  +  +       A + N                +     + 
Sbjct: 66  RELCAGFIASGIDPEKSILINQSQVPEHAQLAWVFN---------------CVARMGWMG 110

Query: 152 RMLS-FESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGI 210
           RM    +         ++ S   F Y  L A D +     +   + +G  DQ  ++    
Sbjct: 111 RMTQWKDKAGK---NAEAASLGLFAYPALMAADILIYHATH---VPVG-EDQKQHLELTR 163

Query: 211 DLGERLK---TPKLFALTSPLLTT--------ASG-TKMGKTLSGA---IWLNKEMTSPY 255
           D+  +         F LT P++            G  KM K+       I L  +  +  
Sbjct: 164 DIAAKFNHDYGVDFFPLTEPVIEGAATRVMSLRDGSKKMSKSDPSPASRINLTDDADTIA 223

Query: 256 NFWQYWRNIDDAD 268
             ++  +   DA 
Sbjct: 224 KKFRKAKTDPDAL 236


>gi|291545897|emb|CBL19005.1| tryptophanyl-tRNA synthetase [Ruminococcus sp. SR1/5]
          Length = 354

 Score = 41.0 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 40/225 (17%), Positives = 70/225 (31%), Gaps = 38/225 (16%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN 102
            T   LH GH    +     LQ +G     L      +I D      +      ++++  
Sbjct: 11  PTGR-LHVGHYVGSLAERVKLQNSG-----LYDEIYIMIADAQ--ALTDNAEHPEKVRH- 61

Query: 103 IEKIKGIFSSFIKY-----GTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFE 157
                 I    + Y        K++  + +    L  + +  +     +    N  +  E
Sbjct: 62  -----NILQVALDYLACGLDPEKSNIFIQSMVPELTELTFYYMNLVTVARVQRNPTVKSE 116

Query: 158 SVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK 217
                 +    + F  F Y I QA D       +   + +G  DQ   +    ++  +  
Sbjct: 117 IKMRNFEASIPVGF--FCYPISQAADITAFRATH---VPVG-EDQLPMLEQCKEIVHKFN 170

Query: 218 TPKLFALTSP-----------LLTTASGT-KMGKTLSGAIWLNKE 250
           T     LT P            L    G  KM K+L   I+L+ E
Sbjct: 171 TVYGDTLTDPEIVLSSNKACLRLPGIDGKAKMSKSLGNCIYLSDE 215


>gi|255535111|ref|YP_003095482.1| Ribosomal large subunit pseudouridine synthase B [Flavobacteriaceae
           bacterium 3519-10]
 gi|255341307|gb|ACU07420.1| Ribosomal large subunit pseudouridine synthase B [Flavobacteriaceae
           bacterium 3519-10]
          Length = 371

 Score = 41.0 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 11/56 (19%), Positives = 25/56 (44%), Gaps = 1/56 (1%)

Query: 340 SISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
            +SK+     + L   I  +G   S  EA   +    +++N ++++    Q++  D
Sbjct: 129 KLSKEVPKETIRLNKYIANSGIC-SRREADELITQGLVQVNGAVVTEMGYQVQKTD 183


>gi|229029250|ref|ZP_04185341.1| Pseudouridine synthase [Bacillus cereus AH1271]
 gi|229172210|ref|ZP_04299774.1| Pseudouridine synthase [Bacillus cereus MM3]
 gi|228611198|gb|EEK68456.1| Pseudouridine synthase [Bacillus cereus MM3]
 gi|228732063|gb|EEL82954.1| Pseudouridine synthase [Bacillus cereus AH1271]
          Length = 242

 Score = 41.0 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 1/53 (1%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           L  +I +AG A S  +A   ++   +K+N  I+     ++  QD     NI L
Sbjct: 4   LQKVIAQAGIA-SRRKAEELIQQGKVKVNGKIVKELGTKVTPQDKVEVNNIPL 55


>gi|30019620|ref|NP_831251.1| ribosomal large subunit pseudouridine synthase B [Bacillus cereus
           ATCC 14579]
 gi|49477247|ref|YP_035689.1| pseudouridylate synthase [Bacillus thuringiensis serovar konkukian
           str. 97-27]
 gi|118477028|ref|YP_894179.1| ribosomal large subunit pseudouridine synthase B [Bacillus
           thuringiensis str. Al Hakam]
 gi|196036830|ref|ZP_03104219.1| ribosomal large subunit pseudouridine synthase B [Bacillus cereus
           W]
 gi|196039034|ref|ZP_03106341.1| ribosomal large subunit pseudouridine synthase B [Bacillus cereus
           NVH0597-99]
 gi|196047636|ref|ZP_03114843.1| ribosomal large subunit pseudouridine synthase B [Bacillus cereus
           03BB108]
 gi|206968047|ref|ZP_03229003.1| ribosomal large subunit pseudouridine synthase B [Bacillus cereus
           AH1134]
 gi|218232708|ref|YP_002366253.1| ribosomal large subunit pseudouridine synthase B [Bacillus cereus
           B4264]
 gi|218902682|ref|YP_002450516.1| ribosomal large subunit pseudouridine synthase B [Bacillus cereus
           AH820]
 gi|225863435|ref|YP_002748813.1| ribosomal large subunit pseudouridine synthase B [Bacillus cereus
           03BB102]
 gi|228914146|ref|ZP_04077764.1| Pseudouridine synthase [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
 gi|228920281|ref|ZP_04083629.1| Pseudouridine synthase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228926603|ref|ZP_04089672.1| Pseudouridine synthase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228932858|ref|ZP_04095725.1| Pseudouridine synthase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228945172|ref|ZP_04107528.1| Pseudouridine synthase [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|228951948|ref|ZP_04114046.1| Pseudouridine synthase [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|228957847|ref|ZP_04119587.1| Pseudouridine synthase [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|229043313|ref|ZP_04191033.1| Pseudouridine synthase [Bacillus cereus AH676]
 gi|229069124|ref|ZP_04202416.1| Pseudouridine synthase [Bacillus cereus F65185]
 gi|229078754|ref|ZP_04211308.1| Pseudouridine synthase [Bacillus cereus Rock4-2]
 gi|229090533|ref|ZP_04221769.1| Pseudouridine synthase [Bacillus cereus Rock3-42]
 gi|229109026|ref|ZP_04238627.1| Pseudouridine synthase [Bacillus cereus Rock1-15]
 gi|229121114|ref|ZP_04250351.1| Pseudouridine synthase [Bacillus cereus 95/8201]
 gi|229126886|ref|ZP_04255898.1| Pseudouridine synthase [Bacillus cereus BDRD-Cer4]
 gi|229144171|ref|ZP_04272585.1| Pseudouridine synthase [Bacillus cereus BDRD-ST24]
 gi|229149770|ref|ZP_04278000.1| Pseudouridine synthase [Bacillus cereus m1550]
 gi|229177979|ref|ZP_04305351.1| Pseudouridine synthase [Bacillus cereus 172560W]
 gi|229183767|ref|ZP_04310984.1| Pseudouridine synthase [Bacillus cereus BGSC 6E1]
 gi|229189653|ref|ZP_04316668.1| Pseudouridine synthase [Bacillus cereus ATCC 10876]
 gi|254721252|ref|ZP_05183042.1| ribosomal large subunit pseudouridine synthase B [Bacillus
           anthracis str. A1055]
 gi|296502142|ref|YP_003663842.1| ribosomal large subunit pseudouridine synthase B [Bacillus
           thuringiensis BMB171]
 gi|29895164|gb|AAP08452.1| Ribosomal large subunit pseudouridine synthase B [Bacillus cereus
           ATCC 14579]
 gi|49328803|gb|AAT59449.1| pseudouridylate synthase [Bacillus thuringiensis serovar konkukian
           str. 97-27]
 gi|118416253|gb|ABK84672.1| ribosomal large subunit pseudouridine synthase B [Bacillus
           thuringiensis str. Al Hakam]
 gi|195990559|gb|EDX54538.1| ribosomal large subunit pseudouridine synthase B [Bacillus cereus
           W]
 gi|196021550|gb|EDX60250.1| ribosomal large subunit pseudouridine synthase B [Bacillus cereus
           03BB108]
 gi|196030179|gb|EDX68779.1| ribosomal large subunit pseudouridine synthase B [Bacillus cereus
           NVH0597-99]
 gi|206736967|gb|EDZ54114.1| ribosomal large subunit pseudouridine synthase B [Bacillus cereus
           AH1134]
 gi|218160665|gb|ACK60657.1| ribosomal large subunit pseudouridine synthase B [Bacillus cereus
           B4264]
 gi|218539452|gb|ACK91850.1| ribosomal large subunit pseudouridine synthase B [Bacillus cereus
           AH820]
 gi|225790880|gb|ACO31097.1| ribosomal large subunit pseudouridine synthase B [Bacillus cereus
           03BB102]
 gi|228593917|gb|EEK51721.1| Pseudouridine synthase [Bacillus cereus ATCC 10876]
 gi|228599616|gb|EEK57219.1| Pseudouridine synthase [Bacillus cereus BGSC 6E1]
 gi|228605467|gb|EEK62916.1| Pseudouridine synthase [Bacillus cereus 172560W]
 gi|228633801|gb|EEK90400.1| Pseudouridine synthase [Bacillus cereus m1550]
 gi|228639179|gb|EEK95595.1| Pseudouridine synthase [Bacillus cereus BDRD-ST24]
 gi|228656826|gb|EEL12652.1| Pseudouridine synthase [Bacillus cereus BDRD-Cer4]
 gi|228662233|gb|EEL17836.1| Pseudouridine synthase [Bacillus cereus 95/8201]
 gi|228674495|gb|EEL29738.1| Pseudouridine synthase [Bacillus cereus Rock1-15]
 gi|228692800|gb|EEL46523.1| Pseudouridine synthase [Bacillus cereus Rock3-42]
 gi|228704627|gb|EEL57059.1| Pseudouridine synthase [Bacillus cereus Rock4-2]
 gi|228714069|gb|EEL65952.1| Pseudouridine synthase [Bacillus cereus F65185]
 gi|228726027|gb|EEL77264.1| Pseudouridine synthase [Bacillus cereus AH676]
 gi|228801763|gb|EEM48640.1| Pseudouridine synthase [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|228807871|gb|EEM54392.1| Pseudouridine synthase [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|228814407|gb|EEM60672.1| Pseudouridine synthase [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|228826779|gb|EEM72546.1| Pseudouridine synthase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228832979|gb|EEM78547.1| Pseudouridine synthase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228839480|gb|EEM84773.1| Pseudouridine synthase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228845479|gb|EEM90512.1| Pseudouridine synthase [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
 gi|296323194|gb|ADH06122.1| ribosomal large subunit pseudouridine synthase B [Bacillus
           thuringiensis BMB171]
          Length = 242

 Score = 41.0 bits (95), Expect = 0.33,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 1/53 (1%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           L  +I +AG A S  +A   ++   +K+N  I+     ++  QD     NI L
Sbjct: 4   LQKVIAQAGIA-SRRKAEELIQQGKVKVNGKIVKELGTKVTPQDKVEVNNIPL 55


>gi|317490401|ref|ZP_07948885.1| ribosomal protein S4 [Eggerthella sp. 1_3_56FAA]
 gi|325833388|ref|ZP_08165837.1| ribosomal protein S4 [Eggerthella sp. HGA1]
 gi|316910536|gb|EFV32161.1| ribosomal protein S4 [Eggerthella sp. 1_3_56FAA]
 gi|325485312|gb|EGC87781.1| ribosomal protein S4 [Eggerthella sp. HGA1]
          Length = 208

 Score = 41.0 bits (95), Expect = 0.33,   Method: Composition-based stats.
 Identities = 11/45 (24%), Positives = 22/45 (48%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
            ++ + GFA S  EAR+ ++   I +N   +     ++K  D  +
Sbjct: 102 NVVYRLGFAKSRAEARQQVRHGHITVNGRRVDIPSFRVKPGDLVA 146


>gi|229074764|ref|ZP_04207783.1| Pseudouridine synthase [Bacillus cereus Rock4-18]
 gi|229096063|ref|ZP_04227037.1| Pseudouridine synthase [Bacillus cereus Rock3-29]
 gi|229102175|ref|ZP_04232885.1| Pseudouridine synthase [Bacillus cereus Rock3-28]
 gi|229115019|ref|ZP_04244430.1| Pseudouridine synthase [Bacillus cereus Rock1-3]
 gi|228668435|gb|EEL23866.1| Pseudouridine synthase [Bacillus cereus Rock1-3]
 gi|228681245|gb|EEL35412.1| Pseudouridine synthase [Bacillus cereus Rock3-28]
 gi|228687355|gb|EEL41259.1| Pseudouridine synthase [Bacillus cereus Rock3-29]
 gi|228708362|gb|EEL60516.1| Pseudouridine synthase [Bacillus cereus Rock4-18]
          Length = 242

 Score = 41.0 bits (95), Expect = 0.33,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 1/53 (1%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           L  +I +AG A S  +A   ++   +K+N  I+     ++  QD     NI L
Sbjct: 4   LQKVIAQAGIA-SRRKAEELIQQGKVKVNGKIVKELGTKVTPQDKVEVNNIPL 55


>gi|257792535|ref|YP_003183141.1| 30S ribosomal protein S4 [Eggerthella lenta DSM 2243]
 gi|257476432|gb|ACV56752.1| ribosomal protein S4 [Eggerthella lenta DSM 2243]
          Length = 208

 Score = 41.0 bits (95), Expect = 0.33,   Method: Composition-based stats.
 Identities = 11/45 (24%), Positives = 22/45 (48%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
            ++ + GFA S  EAR+ ++   I +N   +     ++K  D  +
Sbjct: 102 NVVYRLGFAKSRAEARQQVRHGHITVNGRRVDIPSFRVKPGDLVA 146


>gi|303285456|ref|XP_003062018.1| tRNA synthetase [Micromonas pusilla CCMP1545]
 gi|226456429|gb|EEH53730.1| tRNA synthetase [Micromonas pusilla CCMP1545]
          Length = 538

 Score = 41.0 bits (95), Expect = 0.33,   Method: Composition-based stats.
 Identities = 45/240 (18%), Positives = 80/240 (33%), Gaps = 35/240 (14%)

Query: 15  RGFIHQISNPRELDILCSQ----GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           RG        RELD + S          Y G   ++ +LH GHL       WLQ     P
Sbjct: 88  RGMFFAH---RELDQIVSAYERGEKFYLYTGRGPSSEALHLGHLIPFHFTKWLQDAFKVP 144

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
           + +              D+ + + +S E+ E     +      I  G       + ++  
Sbjct: 145 LVI-----------QLTDDEKFLWKSLELSEARRLARENAKDIIACGFDPRRTFIFSDVD 193

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEF-------NYMILQAYD 183
           ++C+  Y++ L+ I    + N+  +          E ++  + F        +     + 
Sbjct: 194 YMCAPFYVNTLK-IAKCVTFNQ--ARGIFG--FSGESNIGQIGFPPTQAAPAFPDCFPHL 248

Query: 184 FVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFAL---TSPLLTTASGTKMGKT 240
           F +  K+  C +     DQ        D   R+   K   +     P L   SG KM  +
Sbjct: 249 FGKCKKSLRCLIPC-AIDQDPYFRMTRDAAPRIGGHKPALVESRFFPALKGESG-KMSAS 306


>gi|149911772|ref|ZP_01900377.1| hypothetical protein PE36_14851 [Moritella sp. PE36]
 gi|149805160|gb|EDM65181.1| hypothetical protein PE36_14851 [Moritella sp. PE36]
          Length = 200

 Score = 41.0 bits (95), Expect = 0.33,   Method: Composition-based stats.
 Identities = 9/58 (15%), Positives = 23/58 (39%)

Query: 341 ISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
           I        + L  ++      TS +EA+ ++    + +N  + + ++ +I   D   
Sbjct: 10  IPVVVAEEPIELYKILKIENLVTSGSEAKNYIADGYVYVNGEVETRKRKKIMFGDIIG 67


>gi|49184399|ref|YP_027651.1| RNA pseudouridine [Bacillus anthracis str. Sterne]
 gi|165872651|ref|ZP_02217281.1| ribosomal large subunit pseudouridine synthase B [Bacillus
           anthracis str. A0488]
 gi|167634452|ref|ZP_02392773.1| ribosomal large subunit pseudouridine synthase B [Bacillus
           anthracis str. A0442]
 gi|167641611|ref|ZP_02399857.1| ribosomal large subunit pseudouridine synthase B [Bacillus
           anthracis str. A0193]
 gi|170689224|ref|ZP_02880420.1| ribosomal large subunit pseudouridine synthase B [Bacillus
           anthracis str. A0465]
 gi|170706366|ref|ZP_02896827.1| ribosomal large subunit pseudouridine synthase B [Bacillus
           anthracis str. A0389]
 gi|177651473|ref|ZP_02934262.1| ribosomal large subunit pseudouridine synthase B [Bacillus
           anthracis str. A0174]
 gi|190568102|ref|ZP_03021012.1| ribosomal large subunit pseudouridine synthase B [Bacillus
           anthracis Tsiankovskii-I]
 gi|227815681|ref|YP_002815690.1| ribosomal large subunit pseudouridine synthase B [Bacillus
           anthracis str. CDC 684]
 gi|229602768|ref|YP_002865978.1| ribosomal large subunit pseudouridine synthase B [Bacillus
           anthracis str. A0248]
 gi|254682364|ref|ZP_05146225.1| ribosomal large subunit pseudouridine synthase B [Bacillus
           anthracis str. CNEVA-9066]
 gi|254733779|ref|ZP_05191493.1| ribosomal large subunit pseudouridine synthase B [Bacillus
           anthracis str. Western North America USA6153]
 gi|254740530|ref|ZP_05198221.1| ribosomal large subunit pseudouridine synthase B [Bacillus
           anthracis str. Kruger B]
 gi|254753919|ref|ZP_05205954.1| ribosomal large subunit pseudouridine synthase B [Bacillus
           anthracis str. Vollum]
 gi|254759015|ref|ZP_05211042.1| ribosomal large subunit pseudouridine synthase B [Bacillus
           anthracis str. Australia 94]
 gi|270000599|ref|YP_003329038.1| ribosomal large subunit pseudouridine synthase B [Bacillus
           anthracis str. Ames]
 gi|291612213|ref|YP_003541027.1| ribosomal large subunit pseudouridine synthase B [Bacillus
           anthracis str. 'Ames Ancestor']
 gi|49178326|gb|AAT53702.1| RNA pseudouridine [Bacillus anthracis str. Sterne]
 gi|164711595|gb|EDR17142.1| ribosomal large subunit pseudouridine synthase B [Bacillus
           anthracis str. A0488]
 gi|167510404|gb|EDR85804.1| ribosomal large subunit pseudouridine synthase B [Bacillus
           anthracis str. A0193]
 gi|167530340|gb|EDR93066.1| ribosomal large subunit pseudouridine synthase B [Bacillus
           anthracis str. A0442]
 gi|170128900|gb|EDS97766.1| ribosomal large subunit pseudouridine synthase B [Bacillus
           anthracis str. A0389]
 gi|170666779|gb|EDT17546.1| ribosomal large subunit pseudouridine synthase B [Bacillus
           anthracis str. A0465]
 gi|172082751|gb|EDT67814.1| ribosomal large subunit pseudouridine synthase B [Bacillus
           anthracis str. A0174]
 gi|190560836|gb|EDV14811.1| ribosomal large subunit pseudouridine synthase B [Bacillus
           anthracis Tsiankovskii-I]
 gi|224552864|gb|ACN55073.1| ribosomal large subunit pseudouridine synthase B [Bacillus
           anthracis str. 'Ames Ancestor']
 gi|227004794|gb|ACP14537.1| ribosomal large subunit pseudouridine synthase B [Bacillus
           anthracis str. CDC 684]
 gi|229267176|gb|ACQ48813.1| ribosomal large subunit pseudouridine synthase B [Bacillus
           anthracis str. A0248]
 gi|269850258|gb|ACZ49988.1| ribosomal large subunit pseudouridine synthase B [Bacillus
           anthracis str. Ames]
          Length = 242

 Score = 41.0 bits (95), Expect = 0.33,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 1/53 (1%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           L  +I +AG A S  +A   ++   +K+N  I+     ++  QD     NI L
Sbjct: 4   LQKVIAQAGIA-SRRKAEELIQQGKVKVNGKIVKELGTKVTPQDKVEVNNIPL 55


>gi|253578469|ref|ZP_04855741.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
 gi|251850787|gb|EES78745.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
          Length = 353

 Score = 41.0 bits (95), Expect = 0.34,   Method: Composition-based stats.
 Identities = 37/236 (15%), Positives = 73/236 (30%), Gaps = 35/236 (14%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGH--KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +     LQ +G   +   ++    ++  +    ++ R+ +    + 
Sbjct: 11  PTGR-LHVGHYVGSLSERVRLQNSGLYDEIYIMIADAQALTDNAEHPEKIRQNILQVALD 69

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
                I             K+   + +    L  + +  +     +    N  +  E   
Sbjct: 70  YLACGI----------DPEKSTIFIQSMVPELTELTFYYMNLVTVARVQRNPTVKSEIQM 119

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
              +    + F  F Y I QA D     +     +   G DQ   +    ++  +  T  
Sbjct: 120 RNFEASIPVGF--FCYPISQAADITA-FRATTVPV---GEDQLPMLEQCKEIVHKFNTVY 173

Query: 221 LFALTSP-----------LLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNI 264
              LT P            L    G  KM K+L   I+L+ E     +  +   ++
Sbjct: 174 GETLTEPEIILPSNKACLRLPGIDGKAKMSKSLGNCIYLSDEEA---DVKKKVMSM 226


>gi|89902009|ref|YP_524480.1| tryptophanyl-tRNA synthetase [Rhodoferax ferrireducens T118]
 gi|89346746|gb|ABD70949.1| tryptophanyl-tRNA synthetase [Rhodoferax ferrireducens T118]
          Length = 432

 Score = 41.0 bits (95), Expect = 0.34,   Method: Composition-based stats.
 Identities = 19/94 (20%), Positives = 29/94 (30%), Gaps = 13/94 (13%)

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLF 222
           +  E  +S   F Y +L   D + +   +   +   G DQ  +I    D+          
Sbjct: 124 IDPESDVSAGLFMYPVLMGADIL-MFNAHKVPV---GRDQVQHIEMARDMAHSFNHRYGD 179

Query: 223 ALTSP---------LLTTASGTKMGKTLSGAIWL 247
               P          L    G KM K+    I L
Sbjct: 180 HFVPPEAEIEDNVATLPGLDGRKMSKSYDNTIPL 213


>gi|229160522|ref|ZP_04288517.1| Pseudouridine synthase [Bacillus cereus R309803]
 gi|228622932|gb|EEK79763.1| Pseudouridine synthase [Bacillus cereus R309803]
          Length = 242

 Score = 41.0 bits (95), Expect = 0.34,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 1/53 (1%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           L  +I +AG A S  +A   ++   +K+N  I+     ++  QD     NI L
Sbjct: 4   LQKVIAQAGIA-SRRKAEELIQQGKVKVNGKIVKELGTKVTPQDKVEVNNIPL 55


>gi|15805585|ref|NP_294281.1| tryptophanyl-tRNA synthetase [Deinococcus radiodurans R1]
 gi|25009454|sp|Q9RWV7|SYW_DEIRA RecName: Full=Tryptophanyl-tRNA synthetase; AltName:
           Full=Tryptophan--tRNA ligase; Short=TrpRS
 gi|6458248|gb|AAF10134.1|AE001913_8 tryptophanyl-tRNA synthetase [Deinococcus radiodurans R1]
          Length = 330

 Score = 41.0 bits (95), Expect = 0.34,   Method: Composition-based stats.
 Identities = 40/302 (13%), Positives = 86/302 (28%), Gaps = 50/302 (16%)

Query: 37  TAYIGYDLTASSLHAGHLTQLML--LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMM 94
             + G   T    H G+    M   +   ++ G + +  +    + I +P   D   + +
Sbjct: 3   RVFSGIQPTGDP-HIGNYFGAMQNYVRLGEQYGKQSLYCVVDLHA-ITNPGAFDP--QTL 58

Query: 95  RSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRML 154
             +     +                ++        +W+                 V  + 
Sbjct: 59  AQKTFDMAVANFAIGLDPSKVVFFVQSHVPEHQELSWI-----------FTCVTPVGELE 107

Query: 155 SFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
                + +  + +S+      Y  L A D +     Y   +   G DQ  +I    ++  
Sbjct: 108 RMTQYKDKSAQFESVPSGLLMYPALMAADILL----YKADIVPVGEDQTQHIELTREIAR 163

Query: 215 RLKTPKLFALTSPL---------LTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNI 264
           +         T P          +    G  KM K+    I + +      + WQ  R  
Sbjct: 164 KFNHNFGETFTEPKAVYNKEALRIPGVDGQGKMSKSKGNTIGILEPFG---DIWQKLRVA 220

Query: 265 D------------DAD---VVSFAKRLT-TLPMSEIDRMAKLQGKEINEAKKIIATEITT 308
                        D D   +  + K  +    +  + +  +  G    + KK++ T IT 
Sbjct: 221 PTDPARVRRTDPGDPDKCLIGDYHKLFSPPETLETVYQGCRTAGIGCVDCKKMLMTHITE 280

Query: 309 MV 310
            +
Sbjct: 281 HL 282


>gi|42780671|ref|NP_977918.1| ribosomal large subunit pseudouridine synthase B [Bacillus cereus
           ATCC 10987]
 gi|47569145|ref|ZP_00239833.1| ribosomal large subunit pseudouridine synthase B [Bacillus cereus
           G9241]
 gi|206978260|ref|ZP_03239138.1| ribosomal large subunit pseudouridine synthase B [Bacillus cereus
           H3081.97]
 gi|217959048|ref|YP_002337596.1| ribosomal large subunit pseudouridine synthase B [Bacillus cereus
           AH187]
 gi|222095202|ref|YP_002529262.1| ribosomal large subunit pseudouridine synthase b [Bacillus cereus
           Q1]
 gi|228984651|ref|ZP_04144824.1| Pseudouridine synthase [Bacillus thuringiensis serovar tochigiensis
           BGSC 4Y1]
 gi|229138265|ref|ZP_04266860.1| Pseudouridine synthase [Bacillus cereus BDRD-ST26]
 gi|229155139|ref|ZP_04283251.1| Pseudouridine synthase [Bacillus cereus ATCC 4342]
 gi|229195772|ref|ZP_04322532.1| Pseudouridine synthase [Bacillus cereus m1293]
 gi|300117500|ref|ZP_07055290.1| ribosomal large subunit pseudouridine synthase B [Bacillus cereus
           SJ1]
 gi|301053111|ref|YP_003791322.1| pseudouridylate synthase [Bacillus anthracis CI]
 gi|42736591|gb|AAS40526.1| ribosomal large subunit pseudouridine synthase B [Bacillus cereus
           ATCC 10987]
 gi|47554216|gb|EAL12579.1| ribosomal large subunit pseudouridine synthase B [Bacillus cereus
           G9241]
 gi|206743509|gb|EDZ54938.1| ribosomal large subunit pseudouridine synthase B [Bacillus cereus
           H3081.97]
 gi|217066494|gb|ACJ80744.1| ribosomal large subunit pseudouridine synthase B [Bacillus cereus
           AH187]
 gi|221239260|gb|ACM11970.1| ribosomal large subunit pseudouridine synthase B [Bacillus cereus
           Q1]
 gi|228587669|gb|EEK45727.1| Pseudouridine synthase [Bacillus cereus m1293]
 gi|228628266|gb|EEK84981.1| Pseudouridine synthase [Bacillus cereus ATCC 4342]
 gi|228645157|gb|EEL01394.1| Pseudouridine synthase [Bacillus cereus BDRD-ST26]
 gi|228775045|gb|EEM23438.1| Pseudouridine synthase [Bacillus thuringiensis serovar tochigiensis
           BGSC 4Y1]
 gi|298725335|gb|EFI65987.1| ribosomal large subunit pseudouridine synthase B [Bacillus cereus
           SJ1]
 gi|300375280|gb|ADK04184.1| pseudouridylate synthase [Bacillus cereus biovar anthracis str. CI]
 gi|324325588|gb|ADY20848.1| ribosomal large subunit pseudouridine synthase B [Bacillus
           thuringiensis serovar finitimus YBT-020]
          Length = 242

 Score = 41.0 bits (95), Expect = 0.34,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 1/53 (1%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           L  +I +AG A S  +A   ++   +K+N  I+     ++  QD     NI L
Sbjct: 4   LQKVIAQAGIA-SRRKAEELIQQGKVKVNGKIVKELGTKVTPQDKVEVNNIPL 55


>gi|331697591|ref|YP_004333830.1| pseudouridine synthase Rsu [Pseudonocardia dioxanivorans CB1190]
 gi|326952280|gb|AEA25977.1| pseudouridine synthase Rsu [Pseudonocardia dioxanivorans CB1190]
          Length = 252

 Score = 41.0 bits (95), Expect = 0.34,   Method: Composition-based stats.
 Identities = 10/62 (16%), Positives = 22/62 (35%), Gaps = 4/62 (6%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD---FDSTGNIK 403
           S G+ L  ++ +AG   S   A   + +  + ++  I+     ++             I 
Sbjct: 6   SDGVRLQKVLAQAG-VASRRAAEELIAAGRVSVDGEIVREMGRRVDPDTAVVHVDGSRIV 64

Query: 404 LS 405
           L 
Sbjct: 65  LR 66


>gi|229166414|ref|ZP_04294170.1| Pseudouridine synthase [Bacillus cereus AH621]
 gi|228616988|gb|EEK74057.1| Pseudouridine synthase [Bacillus cereus AH621]
          Length = 242

 Score = 41.0 bits (95), Expect = 0.34,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 1/53 (1%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           L  +I +AG A S  +A   ++   +K+N  I+     ++  QD     NI L
Sbjct: 4   LQKVIAQAGIA-SRRKAEELIQQGKVKVNGKIVKELGTKVTPQDKVEVNNIPL 55


>gi|242807612|ref|XP_002484992.1| 30S ribosomal subunit  S4, putative [Talaromyces stipitatus ATCC
           10500]
 gi|218715617|gb|EED15039.1| 30S ribosomal subunit S4, putative [Talaromyces stipitatus ATCC
           10500]
          Length = 443

 Score = 41.0 bits (95), Expect = 0.34,   Method: Composition-based stats.
 Identities = 14/72 (19%), Positives = 31/72 (43%), Gaps = 2/72 (2%)

Query: 325 ECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSII 384
           E    +   +  P  +++   + R + +   I +A FA+ST +AR+ +   A+ +N   +
Sbjct: 99  ETASGTNTPKRTPYTNMTFAPLERRLDVA--IFRAMFASSTRQARQFVVHGAVTVNGKKM 156

Query: 385 SNEKLQIKLQDF 396
                 +   D 
Sbjct: 157 QFPGYLLNPGDL 168


>gi|218896501|ref|YP_002444912.1| ribosomal large subunit pseudouridine synthase B [Bacillus cereus
           G9842]
 gi|228900151|ref|ZP_04064384.1| Pseudouridine synthase [Bacillus thuringiensis IBL 4222]
 gi|228907203|ref|ZP_04071064.1| Pseudouridine synthase [Bacillus thuringiensis IBL 200]
 gi|228938683|ref|ZP_04101288.1| Pseudouridine synthase [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|228964544|ref|ZP_04125654.1| Pseudouridine synthase [Bacillus thuringiensis serovar sotto str.
           T04001]
 gi|228971565|ref|ZP_04132189.1| Pseudouridine synthase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228978176|ref|ZP_04138554.1| Pseudouridine synthase [Bacillus thuringiensis Bt407]
 gi|218545922|gb|ACK98316.1| ribosomal large subunit pseudouridine synthase B [Bacillus cereus
           G9842]
 gi|228781648|gb|EEM29848.1| Pseudouridine synthase [Bacillus thuringiensis Bt407]
 gi|228788224|gb|EEM36179.1| Pseudouridine synthase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228795144|gb|EEM42640.1| Pseudouridine synthase [Bacillus thuringiensis serovar sotto str.
           T04001]
 gi|228821059|gb|EEM67079.1| Pseudouridine synthase [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|228852424|gb|EEM97217.1| Pseudouridine synthase [Bacillus thuringiensis IBL 200]
 gi|228859557|gb|EEN03984.1| Pseudouridine synthase [Bacillus thuringiensis IBL 4222]
 gi|326939191|gb|AEA15087.1| ribosomal large subunit pseudouridine synthase B [Bacillus
           thuringiensis serovar chinensis CT-43]
          Length = 242

 Score = 41.0 bits (95), Expect = 0.34,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 1/53 (1%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           L  +I +AG A S  +A   ++   +K+N  I+     ++  QD     NI L
Sbjct: 4   LQKVIAQAGIA-SRRKAEELIQQGKVKVNGKIVKELGTKVTPQDKVEVNNIPL 55


>gi|56695370|ref|YP_165718.1| lysyl-tRNA synthetase [Ruegeria pomeroyi DSS-3]
 gi|56677107|gb|AAV93773.1| lysyl-tRNA synthetase [Ruegeria pomeroyi DSS-3]
          Length = 548

 Score = 41.0 bits (95), Expect = 0.34,   Method: Composition-based stats.
 Identities = 16/85 (18%), Positives = 27/85 (31%), Gaps = 6/85 (7%)

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            DF           +M G D   N      +   L  P     T  L    +G K+ K+ 
Sbjct: 260 PDFGARWAALGVDFEMYGKDHSTNTPIYDGICRVLGVPAPEHFTYELFLDENGQKISKSS 319

Query: 242 SGAIWLNKEMT------SPYNFWQY 260
              + +++ +T        Y  +Q 
Sbjct: 320 GNGVSIDEWLTYASSESLAYFMYQK 344


>gi|330814795|ref|XP_003291416.1| hypothetical protein DICPUDRAFT_156014 [Dictyostelium purpureum]
 gi|325078409|gb|EGC32062.1| hypothetical protein DICPUDRAFT_156014 [Dictyostelium purpureum]
          Length = 383

 Score = 41.0 bits (95), Expect = 0.35,   Method: Composition-based stats.
 Identities = 43/247 (17%), Positives = 88/247 (35%), Gaps = 42/247 (17%)

Query: 17  FIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLM---------LLFWLQKT- 66
            ++  ++  E++    +  VT + G   T+++LH G+    M         +    + + 
Sbjct: 25  LVNLKTSIEEIN-FDEKRKVTVFSGMQPTSAALHLGNYLGAMDNWLKIQDLIAKHNEVSP 83

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           GHK I  +    S+      +  S + + S  +   I  +             ++     
Sbjct: 84  GHKLIFSIVDLHSLTAT---KTLSPKELHSNTLSVAINYLASGIDPQKVILFNQSMVAAH 140

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKRE-QSLSFLEFNYMILQAYDFV 185
           +  TW        +   I SF  ++ M+     + + K   QS+S    +Y +L A D +
Sbjct: 141 SELTW--------IFNCIASFSKLSTMVQ---FKEKSKSNSQSISNGLLSYPVLMAADIL 189

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLG---ERLKTPKLFALTSP--------LLTTASG 234
            L +     +   G DQ  +I    ++          K F L +         +++   G
Sbjct: 190 -LYRATHVPV---GDDQTQHIEFTREIVNSFHHTYKKKYFPLPTIISSETSKRIMSLQDG 245

Query: 235 -TKMGKT 240
             KM K+
Sbjct: 246 RVKMSKS 252


>gi|325266010|ref|ZP_08132696.1| tryptophan--tRNA ligase [Kingella denitrificans ATCC 33394]
 gi|324982648|gb|EGC18274.1| tryptophan--tRNA ligase [Kingella denitrificans ATCC 33394]
          Length = 337

 Score = 41.0 bits (95), Expect = 0.35,   Method: Composition-based stats.
 Identities = 22/96 (22%), Positives = 36/96 (37%), Gaps = 18/96 (18%)

Query: 164 KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFA 223
            ++  +    ++Y IL A D + + +     +   G DQ  ++    D+ +R      F 
Sbjct: 126 DQDHQIEMGLYSYPILMAADIL-MFQANQVPV---GRDQIQHVEMARDIAQRFNHR--FG 179

Query: 224 ---LTSP---------LLTTASGTKMGKTLSGAIWL 247
              LT P         LL    G KM K+    I L
Sbjct: 180 KNLLTLPEALIDENVQLLVGLDGRKMSKSYGNTIPL 215


>gi|325958372|ref|YP_004289838.1| tryptophanyl-tRNA synthetase [Methanobacterium sp. AL-21]
 gi|325329804|gb|ADZ08866.1| tryptophanyl-tRNA synthetase [Methanobacterium sp. AL-21]
          Length = 365

 Score = 41.0 bits (95), Expect = 0.35,   Method: Composition-based stats.
 Identities = 42/253 (16%), Positives = 82/253 (32%), Gaps = 33/253 (13%)

Query: 11  ILSERGFIHQISNPRELDILCSQGV-VTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
           +L +RG I    +   +     +        G   +   +H GH   +  L W QK G  
Sbjct: 36  VLMKRGIIFGQRDFGRIVKAMHEKSEFAVVSGMMPSGK-MHIGHKMIVDQLVWYQKHGAD 94

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNE 129
               +    S         ESR +         +E +    +  + +        + +  
Sbjct: 95  IFIPIADMESFSARDIEFKESREL-------AIVEYLTNYIALGLDFKQKNIHCYLQS-- 145

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE-LA 188
               +     L    G   ++N M      ++      S +       ++Q  D +    
Sbjct: 146 ---ENKTVQSLAYLTGKRVNLNEM------KAIYGFSGSTNISHLYVPLVQVADILHPQL 196

Query: 189 KNYD---CRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSP------LLTTASGTKMGK 239
           + +      +   G DQ  +I    D+ +RLK+   F   +P       +T  +G KM  
Sbjct: 197 EEFGGPKPTVVPVGPDQDPHIRLTRDIADRLKSK--FNFIAPSSTYHRFITGLTGDKMSS 254

Query: 240 TL-SGAIWLNKEM 251
           +    AI+L+ + 
Sbjct: 255 SKPKTAIFLSDKP 267


>gi|15621130|dbj|BAB65126.1| 406aa long hypothetical tryptophanyl-tRNA synthetase [Sulfolobus
           tokodaii str. 7]
          Length = 406

 Score = 41.0 bits (95), Expect = 0.35,   Method: Composition-based stats.
 Identities = 47/265 (17%), Positives = 81/265 (30%), Gaps = 35/265 (13%)

Query: 6   SDFLSILSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSL--HAGHLTQLMLLFW 62
           +D L ++  R       +    L           Y G    A SL  H GHL   +   W
Sbjct: 68  NDELHVMLRRDVFFSHRDLDLVLKDYQDGKGFFLYTG---RAPSLGMHIGHLIPFIFTKW 124

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTD 122
           LQ   +  + +      I  D  F           + ++            I  G     
Sbjct: 125 LQDKFNVNLYI-----EITDDEKFMRN--PEYTLDQTRQWA---YDNILDIIAVGFNPDK 174

Query: 123 ALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY 182
             +  +  ++ ++  I           + + L+F  VR+    + S +     Y  LQ  
Sbjct: 175 TFIFQDTEYIRNMYPI--------AIKIAKKLTFSEVRATFGLDTSSNIGIIWYPALQ-- 224

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGE---RLKTPKLFALTSPLLTTASGTKMGK 239
               + +   C +  G  DQ        D+ E     K  ++ +   P LT   G KM  
Sbjct: 225 IAPTMFEKRRCLIPAG-IDQDPYWRLQRDIAESLGYYKAAQIHSKFLPPLTGPEG-KMSS 282

Query: 240 TLSG-AIWLNKEMTSPYNFWQYWRN 263
           +    AI+L  +   P    +    
Sbjct: 283 SQPETAIYLTDD---PKTVERKIMK 304


>gi|229058206|ref|ZP_04196594.1| Pseudouridine synthase [Bacillus cereus AH603]
 gi|228720070|gb|EEL71654.1| Pseudouridine synthase [Bacillus cereus AH603]
          Length = 242

 Score = 41.0 bits (95), Expect = 0.35,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 1/53 (1%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           L  +I +AG A S  +A   ++   +K+N  I+     ++  QD     NI L
Sbjct: 4   LQKVIAQAGIA-SRRKAEELIQQGKVKVNGKIVKELGTKVTPQDKVEVNNIPL 55


>gi|218531156|ref|YP_002421972.1| lysyl-tRNA synthetase [Methylobacterium chloromethanicum CM4]
 gi|218523459|gb|ACK84044.1| lysyl-tRNA synthetase [Methylobacterium chloromethanicum CM4]
          Length = 567

 Score = 41.0 bits (95), Expect = 0.36,   Method: Composition-based stats.
 Identities = 19/154 (12%), Positives = 42/154 (27%), Gaps = 7/154 (4%)

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            D+           +M G D   ++     +   L           L     G K+ K+ 
Sbjct: 244 PDWAMRWVALGVDYEMAGKDLIDSVKLSGQIARALGVEPPEGFNYELFLDEKGQKISKSK 303

Query: 242 SGAIWLNK--EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK-EINEA 298
              + +++     +P +   +  N          +    +    +D      G+    EA
Sbjct: 304 GNGLTIDEWLTYATPESLALFMYNKP----REAKRLFFDVIPRNVDEYDNFLGRFAGQEA 359

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIH 332
           K  +   +  +  G   A +    A       + 
Sbjct: 360 KHRLGNPVWHLHAGEPPAVETIDEAGTTLSFGML 393


>gi|39995572|ref|NP_951523.1| S4 domain-containing protein [Geobacter sulfurreducens PCA]
 gi|39982335|gb|AAR33796.1| S4 domain protein [Geobacter sulfurreducens PCA]
          Length = 71

 Score = 41.0 bits (95), Expect = 0.36,   Method: Composition-based stats.
 Identities = 7/33 (21%), Positives = 15/33 (45%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNS 382
           + L + +  A    S  EA+  +   A+++N  
Sbjct: 14  IKLDSFLKAANLVASGGEAKIIIAEGAVRVNGE 46


>gi|261338517|ref|ZP_05966401.1| tryptophan--tRNA ligase [Bifidobacterium gallicum DSM 20093]
 gi|270276521|gb|EFA22375.1| tryptophan--tRNA ligase [Bifidobacterium gallicum DSM 20093]
          Length = 388

 Score = 41.0 bits (95), Expect = 0.36,   Method: Composition-based stats.
 Identities = 48/366 (13%), Positives = 105/366 (28%), Gaps = 66/366 (18%)

Query: 22  SNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSI 80
           S+     +       T   G   T   LH GH    +     +Q  G     ++      
Sbjct: 48  SDATLAKLEADPSKFTMLTGDRPTGR-LHLGHFFGSIRERVAMQNRGVNTNIIIADY--- 103

Query: 81  IGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG----TGKTDALMLNNETWLCSIK 136
                      +++  ++  E+IE  + + +  + Y           +  ++     +  
Sbjct: 104 -----------QVITDRDTTEHIE--ENVLNLVLDYLAAGIDPTKTMIFTHSAVPAENQL 150

Query: 137 YIDLLREIGSFFSVNRMLSFESVRSRLK-REQSLSFLEFNYMILQAYDFVELAKNYDCRL 195
            +  L  +             +V+S ++    +L+ L   Y + QA D   L    +   
Sbjct: 151 MLPFLSLVTEAELHRNP----TVKSEMEASGHALTGLLLTYPVHQACD--ILFCKANVV- 203

Query: 196 QMGGSDQWGNIICGIDLGERLKT----------PKLFALT-SPLLTTASGTKMGKTLSGA 244
              G D   ++     +  R                  L+ +P +    G KM K+   +
Sbjct: 204 -PIGKDNLPHVEITRTIARRFNERYAKKHPIFPEPAAILSEAPEIPGLDGRKMSKSYGNS 262

Query: 245 IWLNKEMTSPYNFWQYWRNIDDAD------------VVSFAK---RLTTLPMSEIDRMAK 289
           I L           +   +  D++            V +       +T     EI    +
Sbjct: 263 IMLGATAEETAKLIKK--SPTDSERMITFDPVNRPQVSALLTTAGLVTGRDPREIAE--E 318

Query: 290 LQGKEINEAKKIIATEITTMV--HGREEAEKAAT---AAMECFDMSIHSQHMPTISISKD 344
           +        KK +   +   +  H    AE A           + +  +  +   ++ + 
Sbjct: 319 IGNGGAGTLKKYVTESVNEFLAPHRERRAELAQDMDSIRDILHEGNARANAIANQTLDEV 378

Query: 345 EVSRGM 350
             + GM
Sbjct: 379 RDAMGM 384


>gi|152988322|ref|YP_001350132.1| putative pseudouridylate synthase [Pseudomonas aeruginosa PA7]
 gi|150963480|gb|ABR85505.1| probable pseudouridylate synthase [Pseudomonas aeruginosa PA7]
          Length = 230

 Score = 41.0 bits (95), Expect = 0.36,   Method: Composition-based stats.
 Identities = 7/53 (13%), Positives = 23/53 (43%), Gaps = 1/53 (1%)

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK-NHIICH 415
           S  +A+R +    ++++  ++ +   ++++          L  GK   + + H
Sbjct: 14  SRRDAQRLIAGGRLRVDGQVVRDGTHEVRVFSRVELDERLLQAGKPARYYMLH 66


>gi|163939386|ref|YP_001644270.1| pseudouridine synthase [Bacillus weihenstephanensis KBAB4]
 gi|229132378|ref|ZP_04261232.1| Pseudouridine synthase [Bacillus cereus BDRD-ST196]
 gi|163861583|gb|ABY42642.1| pseudouridine synthase [Bacillus weihenstephanensis KBAB4]
 gi|228651084|gb|EEL07065.1| Pseudouridine synthase [Bacillus cereus BDRD-ST196]
          Length = 242

 Score = 41.0 bits (95), Expect = 0.36,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 1/53 (1%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           L  +I +AG A S  +A   ++   +K+N  I+     ++  QD     NI L
Sbjct: 4   LQKVIAQAGIA-SRRKAEELIQQGKVKVNGKIVKELGTKVTPQDKVEVNNIPL 55


>gi|251797775|ref|YP_003012506.1| ribosomal protein S4 [Paenibacillus sp. JDR-2]
 gi|247545401|gb|ACT02420.1| ribosomal protein S4 [Paenibacillus sp. JDR-2]
          Length = 199

 Score = 41.0 bits (95), Expect = 0.36,   Method: Composition-based stats.
 Identities = 14/82 (17%), Positives = 25/82 (30%), Gaps = 3/82 (3%)

Query: 320 ATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKI 379
                  FD +   + +   S     V     L  L+ + GFA S   AR+ +    + +
Sbjct: 64  EKQFRNLFDKAAKLKGI---SGENFMVLLESRLDNLVFRLGFANSRAGARQLVSHGHVTV 120

Query: 380 NNSIISNEKLQIKLQDFDSTGN 401
           N   +      +   D      
Sbjct: 121 NGKKVDIASYTVSTGDVIGLRE 142


>gi|325679067|ref|ZP_08158661.1| pseudouridylate synthase [Ruminococcus albus 8]
 gi|324109191|gb|EGC03413.1| pseudouridylate synthase [Ruminococcus albus 8]
          Length = 244

 Score = 41.0 bits (95), Expect = 0.36,   Method: Composition-based stats.
 Identities = 13/71 (18%), Positives = 30/71 (42%), Gaps = 4/71 (5%)

Query: 348 RGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFG 407
             + +  +I ++GF  S  +A   + +  + +N   ++     +  +D      IK+   
Sbjct: 2   EKIRIQKIIAESGFC-SRRKAEEFIAAGKVTVNGRKVTLGDKALPGKDLIVVDGIKIDQP 60

Query: 408 KKN---HIICH 415
           KK    +I+ H
Sbjct: 61  KKRNLYYIMLH 71


>gi|229010875|ref|ZP_04168072.1| Pseudouridine synthase [Bacillus mycoides DSM 2048]
 gi|228750549|gb|EEM00378.1| Pseudouridine synthase [Bacillus mycoides DSM 2048]
          Length = 242

 Score = 41.0 bits (95), Expect = 0.36,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 1/53 (1%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           L  +I +AG A S  +A   ++   +K+N  I+     ++  QD     NI L
Sbjct: 4   LQKVIAQAGIA-SRRKAEELIQQGKVKVNGKIVKELGTKVTPQDKVEVNNIPL 55


>gi|220907439|ref|YP_002482750.1| hemolysin A [Cyanothece sp. PCC 7425]
 gi|219864050|gb|ACL44389.1| hemolysin A [Cyanothece sp. PCC 7425]
          Length = 267

 Score = 41.0 bits (95), Expect = 0.36,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 22/41 (53%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
           TL+V      S  +A+R +++  +++N  +I     ++ +Q
Sbjct: 8   TLLVDRQLCDSRQQAQRLIRAGEVRVNQQVIDKPGTEVDVQ 48


>gi|119719500|ref|YP_919995.1| tryptophanyl-tRNA synthetase [Thermofilum pendens Hrk 5]
 gi|119524620|gb|ABL77992.1| tryptophanyl-tRNA synthetase [Thermofilum pendens Hrk 5]
          Length = 386

 Score = 41.0 bits (95), Expect = 0.36,   Method: Composition-based stats.
 Identities = 49/259 (18%), Positives = 79/259 (30%), Gaps = 34/259 (13%)

Query: 12  LSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ-KTGHK 69
           L  R F     +    L+          Y G   + S +H  H+   +   W Q K G  
Sbjct: 53  LLRRNFFFAHRDLNLVLNDYEEGRGFFLYTGRAPSNSPMHIAHIVPFIATRWFQEKFGAN 112

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGI-FSSFIKYGTGKTDALMLNN 128
                             DE + + +  E  E IEK       + I  G  +    +  +
Sbjct: 113 VYI------------QIPDEEKFLAKKVETLEEIEKYAVQDILNIIALGFDENKTFIFRD 160

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ-AYDFVEL 187
             ++  +    +L  +     +N   +          E ++  +   Y  LQ    F E 
Sbjct: 161 TEYISKLYKPAVL--VARH--INFSTARAVFG--FDNESTIGLI--FYPALQIVPTFFEK 212

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG--TKMGKTLSG-A 244
            +     L   G DQ        D+  RL   K   + S L+    G  TKM  +    A
Sbjct: 213 KR----PLIPCGIDQDPYFRLQRDIAPRLNRYKAAEVLSKLVWGLKGPETKMSASEPDTA 268

Query: 245 IWLNKEMTSPYNFWQYWRN 263
           I L+     P    +   N
Sbjct: 269 ILLS---DPPETVKRKIIN 284


>gi|332798233|ref|YP_004459732.1| 30S ribosomal protein S4 [Tepidanaerobacter sp. Re1]
 gi|332695968|gb|AEE90425.1| ribosomal protein S4 [Tepidanaerobacter sp. Re1]
          Length = 208

 Score = 41.0 bits (95), Expect = 0.37,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 23/42 (54%)

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
           GFA+S  +AR+ ++   +++N   ++    Q+K +D  +   
Sbjct: 108 GFASSRPQARQLVRYGHVQVNGKRVTIPSYQVKEKDVVAIRE 149


>gi|317056623|ref|YP_004105090.1| hemolysin A [Ruminococcus albus 7]
 gi|315448892|gb|ADU22456.1| hemolysin A [Ruminococcus albus 7]
          Length = 263

 Score = 41.0 bits (95), Expect = 0.37,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 18/42 (42%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
           + +   A S   A+  +KS  ++IN  + +    ++   D  
Sbjct: 7   LTEKALAKSRERAKSMIKSGCVRINGKVCTKPAAEVGDSDLI 48


>gi|262200160|ref|YP_003271368.1| RNA-binding S4 domain-containing protein [Gordonia bronchialis DSM
           43247]
 gi|262083507|gb|ACY19475.1| RNA-binding S4 domain protein [Gordonia bronchialis DSM 43247]
          Length = 76

 Score = 41.0 bits (95), Expect = 0.37,   Method: Composition-based stats.
 Identities = 9/53 (16%), Positives = 22/53 (41%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNI 402
           + L   +  A    S +EA+  +    +++N  + +    Q+ + D    G +
Sbjct: 16  IRLGQFLKLANLIESGSEAKEVIGDGLVRVNGEVETRRGRQLSVGDVVEIGGV 68


>gi|332665442|ref|YP_004448230.1| pseudouridine synthase Rsu [Haliscomenobacter hydrossis DSM 1100]
 gi|332334256|gb|AEE51357.1| pseudouridine synthase Rsu [Haliscomenobacter hydrossis DSM 1100]
          Length = 274

 Score = 41.0 bits (95), Expect = 0.37,   Method: Composition-based stats.
 Identities = 16/64 (25%), Positives = 24/64 (37%), Gaps = 1/64 (1%)

Query: 342 SKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
           S  E + GM L   +   G   S  EA   +K   I +N+ + +    QIK  D      
Sbjct: 30  SAPESTEGMRLNKYVAHCG-VASRREAAEIVKQGHITVNSVVETEPFYQIKTGDIVKYKG 88

Query: 402 IKLS 405
             + 
Sbjct: 89  QVIR 92


>gi|284166876|ref|YP_003405155.1| tryptophanyl-tRNA synthetase [Haloterrigena turkmenica DSM 5511]
 gi|284016531|gb|ADB62482.1| tryptophanyl-tRNA synthetase [Haloterrigena turkmenica DSM 5511]
          Length = 542

 Score = 41.0 bits (95), Expect = 0.37,   Method: Composition-based stats.
 Identities = 39/221 (17%), Positives = 65/221 (29%), Gaps = 35/221 (15%)

Query: 12  LSERGFIHQISNPRELDILC-SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           L  RG I    + R +     +        G+  T    H GH      + W Q+ G   
Sbjct: 80  LMRRGVIFGHRDYRPVAEALQNDEPAAVLSGFMPTGDP-HIGHKLVFDEIIWHQQQGADA 138

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
             L+    +          S R M  +EI E+         S +  G    +  +     
Sbjct: 139 YGLIADLEA---------NSARGMSWEEIDEHARDY---LLSLLALGFDPEEGELYRQSE 186

Query: 131 WLCSIKYIDLLREIG-----SFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
              + +  DL  E+G     S F        E+  S ++        +  Y  L+     
Sbjct: 187 ---NRELQDLAFELGADANFSEFQAIYGFDGETDVSHMQSVV-TQMADILYPQLEEPKPT 242

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDL---GERLKTPKLFA 223
            +           G DQ  ++    DL       K  + +A
Sbjct: 243 VI---------PVGPDQDPHVRLARDLAERMRFFKVTEAYA 274


>gi|225851008|ref|YP_002731242.1| cysteinyl-tRNA synthetase [Persephonella marina EX-H1]
 gi|254781689|sp|C0QRE6|SYC_PERMH RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|225645417|gb|ACO03603.1| cysteinyl-tRNA synthetase [Persephonella marina EX-H1]
          Length = 487

 Score = 41.0 bits (95), Expect = 0.37,   Method: Composition-based stats.
 Identities = 29/144 (20%), Positives = 44/144 (30%), Gaps = 26/144 (18%)

Query: 229 LTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKR---------LTTL 279
           L T +G KM K+L   I L          +  +    D DV+               +  
Sbjct: 259 LVTVNGQKMSKSLGNYITL-------KEIYSKY----DPDVLRLLVLSVHYRSPLDFSWE 307

Query: 280 PMSEIDRMAKLQGKEIN--EAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMP 337
            M E  +  +     I+  E  K +        H  +E  KA               + P
Sbjct: 308 KMEETKKAYERLKGAIDEYEILKKLPENPDFDEHLYDEIAKAEQGFYAAMSDDF---NTP 364

Query: 338 TISISKDEVSRGMGLL-TLIVKAG 360
               S   + R M +L    VK+G
Sbjct: 365 EALASLFTLVREMNILRDKAVKSG 388


>gi|309801954|ref|ZP_07696068.1| tryptophan--tRNA ligase [Bifidobacterium dentium JCVIHMP022]
 gi|308221402|gb|EFO77700.1| tryptophan--tRNA ligase [Bifidobacterium dentium JCVIHMP022]
          Length = 366

 Score = 41.0 bits (95), Expect = 0.38,   Method: Composition-based stats.
 Identities = 51/343 (14%), Positives = 106/343 (30%), Gaps = 59/343 (17%)

Query: 22  SNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSI 80
           S+     +  + G  T   G   T   LH GH    +     +Q  G     ++      
Sbjct: 28  SDATLARLEENPGKFTMLTGDRPTGR-LHLGHYFGSIRERVAMQNRGVNSNIIIADY--- 83

Query: 81  IGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY----GTGKTDALMLNNETWLCSIK 136
                      +++  ++  E+IE    + +  + Y           +  ++     +  
Sbjct: 84  -----------QVITDRDTTEHIE--DNVLNLVLDYMAAGIDPNKTMIFTHSAVPSENQL 130

Query: 137 YIDLLREIGSFFSVNRMLSFESVRSRLK-REQSLSFLEFNYMILQAYDFVELAKNYDCRL 195
            +  L  +             +V+S ++    +L+ L   Y + QA D   L    +   
Sbjct: 131 MLPFLSLVTEAELHRNP----TVKSEMEASGHALTGLLLTYPVHQACD--ILFCKANVV- 183

Query: 196 QMGGSDQWGNIICGIDLGERLKT----------PKLFALT-SPLLTTASGTKMGKTLSGA 244
              G D   ++     +  R                  L+ +P +    G KM K+   +
Sbjct: 184 -PIGKDNLPHVEITRTIARRFNERYAKKHPVFPEPAAILSEAPEIPGLDGRKMSKSYGNS 242

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKII 302
           I L           +   +  D++     +R+T  P++     A L    +      K I
Sbjct: 243 IMLGATAEETTKLIKK--SPTDSE-----RRITFDPIARPQVSALLTTAGLVTGRDPKEI 295

Query: 303 ATEITTMVHGREEAEKAATAAMECF------DMSIHSQHMPTI 339
           A EI     G    ++    ++  F        +  ++ M +I
Sbjct: 296 AEEIGD--SGAGALKQYVIESVNEFLAPHRERRAELAKDMDSI 336


>gi|50426727|ref|XP_461961.1| DEHA2G09548p [Debaryomyces hansenii CBS767]
 gi|49657631|emb|CAG90429.1| DEHA2G09548p [Debaryomyces hansenii]
          Length = 421

 Score = 41.0 bits (95), Expect = 0.38,   Method: Composition-based stats.
 Identities = 14/60 (23%), Positives = 24/60 (40%), Gaps = 1/60 (1%)

Query: 15  RGFIHQISNPRELDILCSQGVVTA-YIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +  ++  L   G     Y G   ++ S+H GH+   +   WLQ     P+ +
Sbjct: 75  RGVFFSERDLTKILGLYEHGESFFLYTGRGPSSDSMHLGHMVPFIFTKWLQDVFDVPLVI 134


>gi|291549380|emb|CBL25642.1| tryptophanyl-tRNA synthetase [Ruminococcus torques L2-14]
          Length = 361

 Score = 41.0 bits (95), Expect = 0.38,   Method: Composition-based stats.
 Identities = 41/235 (17%), Positives = 67/235 (28%), Gaps = 38/235 (16%)

Query: 44  LTASSLHAGHLTQLMLLFW---LQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
            T   LH GH      L     LQ TG    I +M      + D +   E  R    +  
Sbjct: 11  PTGR-LHVGHYVG--SLRRRVELQNTGDFDDIFIMIADAQALTDNADNPEKVRQNIIEVA 67

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
            + +                K+   + +    L  + +  +     S    N  +  E  
Sbjct: 68  LDYMACG---------LDPEKSTLFIQSQVPELTELSFYYMNLVTVSRLQRNPTVKNEIK 118

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQ------------WGNII 207
               +    + F  F Y I QA D       +   +   G DQ              N +
Sbjct: 119 MRNFEASIPVGF--FTYPISQAADITA----FKATVVPVGEDQLPMLEQTKEIVHKFNSV 172

Query: 208 CGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKE----MTSPYNFW 258
            G  L +             L       KM K+L   I+L++E        ++ +
Sbjct: 173 YGDTLLDPKILLPENEACLRLPGIDGKAKMSKSLGNCIYLSEESEDIKKKVFSMF 227


>gi|226941587|ref|YP_002796661.1| tryptophanyl-tRNA synthetase II [Laribacter hongkongensis HLHK9]
 gi|226716514|gb|ACO75652.1| TrpS2 [Laribacter hongkongensis HLHK9]
          Length = 337

 Score = 41.0 bits (95), Expect = 0.38,   Method: Composition-based stats.
 Identities = 36/226 (15%), Positives = 64/226 (28%), Gaps = 39/226 (17%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
            T   LH GH    +      +  H+   L+    ++               +  +   +
Sbjct: 14  PTGQ-LHLGHFVGSLQNRVALQDSHRQFLLIADAQAL---------------TDNMGNYV 57

Query: 104 EKIKGIFSSFIKY-----GTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
           +    I    + Y        KT   + +    L  +     L  +            + 
Sbjct: 58  KVRDNILQVALDYLAVGIDPAKTTIFIQSLVPELSELSSY-YLNLVSVARLERNPTIKDE 116

Query: 159 VRSR-LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK 217
           +R R  +R+    FL   Y   QA D       +   +   G DQ   I    ++  R  
Sbjct: 117 IRQRGFERDIPAGFL--TYPAAQAADITA----FKATVVPVGEDQIPMIEQTNEIVRRFN 170

Query: 218 TP-------KLFALTSPL--LTTASGT-KMGKTLSGAIWLNKEMTS 253
                    +  AL   +  L    G  KM K+L  ++ L      
Sbjct: 171 ASVDREVLVECQALVPQVGRLPGIDGKAKMSKSLGNSLTLGASPDD 216


>gi|50546507|ref|XP_500723.1| YALI0B10494p [Yarrowia lipolytica]
 gi|49646589|emb|CAG82968.1| YALI0B10494p [Yarrowia lipolytica]
          Length = 571

 Score = 41.0 bits (95), Expect = 0.38,   Method: Composition-based stats.
 Identities = 11/50 (22%), Positives = 21/50 (42%), Gaps = 2/50 (4%)

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG--NIKLSFGK 408
           FA S  +A + ++   + +N   I +    +K  D  S     +  + GK
Sbjct: 134 FAASIRQAGQFIRQGNVTVNGVKIKHASYTLKPGDLISVKPEKVLFAAGK 183


>gi|125975412|ref|YP_001039322.1| SSU ribosomal protein S4P [Clostridium thermocellum ATCC 27405]
 gi|256005301|ref|ZP_05430267.1| ribosomal protein S4 [Clostridium thermocellum DSM 2360]
 gi|281419374|ref|ZP_06250389.1| ribosomal protein S4 [Clostridium thermocellum JW20]
 gi|152060944|sp|A3DJK0|RS4_CLOTH RecName: Full=30S ribosomal protein S4
 gi|125715637|gb|ABN54129.1| SSU ribosomal protein S4P [Clostridium thermocellum ATCC 27405]
 gi|255990737|gb|EEU00853.1| ribosomal protein S4 [Clostridium thermocellum DSM 2360]
 gi|281406994|gb|EFB37257.1| ribosomal protein S4 [Clostridium thermocellum JW20]
 gi|316939528|gb|ADU73562.1| ribosomal protein S4 [Clostridium thermocellum DSM 1313]
          Length = 208

 Score = 41.0 bits (95), Expect = 0.38,   Method: Composition-based stats.
 Identities = 18/110 (16%), Positives = 42/110 (38%), Gaps = 14/110 (12%)

Query: 292 GKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMG 351
           G ++ E +K          +G  E +         F+M++  + +   ++ +   SR   
Sbjct: 54  GLQLREKQKA------RRYYGILEGQ-----FRRYFEMAVKKKGITGENLLQILESRLDN 102

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
           ++    + G A S  EAR+ ++     +N   +      +K+ D  +   
Sbjct: 103 VVY---RMGLAVSRREARQLVRHGHFTVNGKRVDIPSYLVKVGDVIAVKE 149


>gi|325129567|gb|EGC52391.1| S4 RNA-binding domain protein [Neisseria meningitidis OX99.30304]
 gi|325133601|gb|EGC56262.1| S4 RNA-binding domain protein [Neisseria meningitidis M13399]
 gi|325135611|gb|EGC58228.1| S4 RNA-binding domain protein [Neisseria meningitidis M0579]
 gi|325143828|gb|EGC66144.1| S4 RNA-binding domain protein [Neisseria meningitidis M01-240013]
 gi|325204783|gb|ADZ00237.1| S4 RNA-binding domain protein [Neisseria meningitidis M01-240355]
 gi|325206742|gb|ADZ02195.1| S4 RNA-binding domain protein [Neisseria meningitidis M04-240196]
          Length = 77

 Score = 41.0 bits (95), Expect = 0.39,   Method: Composition-based stats.
 Identities = 10/53 (18%), Positives = 22/53 (41%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
           E +  + L  L+  AG A S  +A+  +    +  N    + +  +I+  +  
Sbjct: 8   EDNEYIALCDLLKLAGLAESGGQAKALIAEGLVSRNGETETRKTAKIRGGEVI 60


>gi|301300812|ref|ZP_07206993.1| tryptophan--tRNA ligase II [Lactobacillus salivarius
           ACS-116-V-Col5a]
 gi|300851588|gb|EFK79291.1| tryptophan--tRNA ligase II [Lactobacillus salivarius
           ACS-116-V-Col5a]
          Length = 269

 Score = 41.0 bits (95), Expect = 0.39,   Method: Composition-based stats.
 Identities = 24/119 (20%), Positives = 38/119 (31%), Gaps = 17/119 (14%)

Query: 146 SFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGN 205
           S    N  +  E  +   +R     F  F Y + QA D      N    L   G DQ   
Sbjct: 35  SRLERNPTVKAEIQQKHFERSIPAGF--FTYPVSQAADITAFKAN----LVPVGDDQEPM 88

Query: 206 IICGIDLGERLKT-------PKLFALTSPL---LTTASGT-KMGKTLSGAIWLNKEMTS 253
           +    ++     +                    L    G  KM K+L+ AI+L+ +  +
Sbjct: 89  LEQTREIVRTFNSIYGEVLVEPQGVFAPKGSGRLPGLDGNAKMSKSLNNAIYLSDDADT 147


>gi|306823973|ref|ZP_07457347.1| tryptophan--tRNA ligase [Bifidobacterium dentium ATCC 27679]
 gi|304552971|gb|EFM40884.1| tryptophan--tRNA ligase [Bifidobacterium dentium ATCC 27679]
          Length = 367

 Score = 41.0 bits (95), Expect = 0.39,   Method: Composition-based stats.
 Identities = 51/343 (14%), Positives = 106/343 (30%), Gaps = 59/343 (17%)

Query: 22  SNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSI 80
           S+     +  + G  T   G   T   LH GH    +     +Q  G     ++      
Sbjct: 29  SDATLARLEENPGKFTMLTGDRPTGR-LHLGHYFGSIRERVAMQNRGVNSNIIIADY--- 84

Query: 81  IGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY----GTGKTDALMLNNETWLCSIK 136
                      +++  ++  E+IE    + +  + Y           +  ++     +  
Sbjct: 85  -----------QVITDRDTTEHIE--DNVLNLVLDYMAAGIDPNKTMIFTHSAVPSENQL 131

Query: 137 YIDLLREIGSFFSVNRMLSFESVRSRLK-REQSLSFLEFNYMILQAYDFVELAKNYDCRL 195
            +  L  +             +V+S ++    +L+ L   Y + QA D   L    +   
Sbjct: 132 MLPFLSLVTEAELHRNP----TVKSEMEASGHALTGLLLTYPVHQACD--ILFCKANVV- 184

Query: 196 QMGGSDQWGNIICGIDLGERLKT----------PKLFALT-SPLLTTASGTKMGKTLSGA 244
              G D   ++     +  R                  L+ +P +    G KM K+   +
Sbjct: 185 -PIGKDNLPHVEITRTIARRFNERYAKKHPVFPEPAAILSEAPEIPGLDGRKMSKSYGNS 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKII 302
           I L           +   +  D++     +R+T  P++     A L    +      K I
Sbjct: 244 IMLGATAEETTKLIKK--SPTDSE-----RRITFDPIARPQVSALLTTAGLVTGRDPKEI 296

Query: 303 ATEITTMVHGREEAEKAATAAMECF------DMSIHSQHMPTI 339
           A EI     G    ++    ++  F        +  ++ M +I
Sbjct: 297 AEEIGD--SGAGALKQYVIESVNEFLAPHRERRAELAKDMDSI 337


>gi|237752429|ref|ZP_04582909.1| RNA pseudouridine synthase [Helicobacter winghamensis ATCC BAA-430]
 gi|229375918|gb|EEO26009.1| RNA pseudouridine synthase [Helicobacter winghamensis ATCC BAA-430]
          Length = 262

 Score = 41.0 bits (95), Expect = 0.39,   Method: Composition-based stats.
 Identities = 9/31 (29%), Positives = 15/31 (48%)

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
           S  EA R +K   + IN  ++S+   Q+   
Sbjct: 14  SRREADRLIKEGKVTINKEVVSDFSYQVDKN 44


>gi|154503047|ref|ZP_02040107.1| hypothetical protein RUMGNA_00869 [Ruminococcus gnavus ATCC 29149]
 gi|153796288|gb|EDN78708.1| hypothetical protein RUMGNA_00869 [Ruminococcus gnavus ATCC 29149]
          Length = 71

 Score = 41.0 bits (95), Expect = 0.39,   Method: Composition-based stats.
 Identities = 10/56 (17%), Positives = 22/56 (39%)

Query: 340 SISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           +I   E    + L   +  AG   S  EA+  ++   + +N  + +    ++   D
Sbjct: 3   TIKLRETDEFIKLGQALKAAGLVESGVEAKEVIQDGMVTVNGEVDTRRGRKLYPGD 58


>gi|309799254|ref|ZP_07693502.1| tryptophanyl-tRNA synthetase [Streptococcus infantis SK1302]
 gi|308117099|gb|EFO54527.1| tryptophanyl-tRNA synthetase [Streptococcus infantis SK1302]
          Length = 341

 Score = 41.0 bits (95), Expect = 0.40,   Method: Composition-based stats.
 Identities = 42/244 (17%), Positives = 72/244 (29%), Gaps = 42/244 (17%)

Query: 44  LTASSLHAGHLTQLMLLFWL--QKTGHKPISLMGG---GTSIIGDPSFRDESRRMMRSQE 98
            T   LH GH    +    L  Q+  +     +      T    DP              
Sbjct: 12  PTGK-LHIGHYVGSLKNRVLLQQEDKYDMFVFLADQQALTDHAKDPQ------------T 58

Query: 99  IQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
           I E+I  +  +    +     K+   + +    L  +    +     +    N  +  E 
Sbjct: 59  IVESIGNV-ALDYLAVGLDPNKSTIFIQSQIPELAELSMYYMNLVSLARLERNPTVKTEI 117

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
            +          FL   Y I QA D      NY   + +G +DQ   I    ++      
Sbjct: 118 AQKGFGESIPTGFL--VYPIAQAADITAFKANY---VPVG-TDQKPMIEQTREIVRSFNH 171

Query: 219 P-KLFALTSP-----------LLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNI- 264
                 L  P            L    G  KM K+L+  I+L+ +  +     +   ++ 
Sbjct: 172 AYNCDVLVEPEGIYPENEGAGRLPGLDGNAKMSKSLNNGIYLSDDADT---LRKKVMSMY 228

Query: 265 DDAD 268
            D D
Sbjct: 229 TDPD 232


>gi|190890624|ref|YP_001977166.1| hemolysin protein [Rhizobium etli CIAT 652]
 gi|190695903|gb|ACE89988.1| hemolysin protein [Rhizobium etli CIAT 652]
          Length = 248

 Score = 41.0 bits (95), Expect = 0.40,   Method: Composition-based stats.
 Identities = 8/39 (20%), Positives = 17/39 (43%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
            L+V  G   S + AR  ++   ++I   +++     I 
Sbjct: 11  QLLVSRGLFASRSRARDAVQRGTVRIGGQLVTKAGALIS 49


>gi|149279638|ref|ZP_01885767.1| 30S ribosomal protein S4 [Pedobacter sp. BAL39]
 gi|149229674|gb|EDM35064.1| 30S ribosomal protein S4 [Pedobacter sp. BAL39]
          Length = 202

 Score = 41.0 bits (95), Expect = 0.40,   Method: Composition-based stats.
 Identities = 15/90 (16%), Positives = 29/90 (32%), Gaps = 19/90 (21%)

Query: 320 ATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVK--------AGFATSTNEARRH 371
                  F  +   Q +            G  LL L+           G AT+ + AR+ 
Sbjct: 66  ERQFRNLFTKASSRQGI-----------TGDNLLQLLEARLDNTVYRLGIATTRSAARQL 114

Query: 372 LKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
           +    + +N  +++    Q+K  D  +   
Sbjct: 115 VSHKHVTVNGEVVNIPSYQLKAGDVIAVRE 144


>gi|41615041|ref|NP_963539.1| 30S ribosomal protein S4P [Nanoarchaeum equitans Kin4-M]
 gi|61215657|sp|Q74NF7|RS4_NANEQ RecName: Full=30S ribosomal protein S4P
 gi|40068765|gb|AAR39100.1| NEQ247 [Nanoarchaeum equitans Kin4-M]
          Length = 180

 Score = 41.0 bits (95), Expect = 0.40,   Method: Composition-based stats.
 Identities = 15/93 (16%), Positives = 40/93 (43%), Gaps = 2/93 (2%)

Query: 312 GREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGM--GLLTLIVKAGFATSTNEAR 369
           G++ +E+      +   + + S++     +    V   +   L T++V+ G A +  +AR
Sbjct: 62  GQDISEEKERFLTKLKKLGVLSENAELDDVLDLTVKDVLERRLQTMLVRKGLAKTMKQAR 121

Query: 370 RHLKSNAIKINNSIISNEKLQIKLQDFDSTGNI 402
           + +    I +N  ++      +K ++ D    +
Sbjct: 122 QFIVHGHIMVNGEVVDAPSYLVKKEEEDKIEFV 154


>gi|71424099|ref|XP_812677.1| tryptophanyl-tRNA synthetase [Trypanosoma cruzi strain CL Brener]
 gi|70877488|gb|EAN90826.1| tryptophanyl-tRNA synthetase, putative [Trypanosoma cruzi]
          Length = 491

 Score = 41.0 bits (95), Expect = 0.40,   Method: Composition-based stats.
 Identities = 43/256 (16%), Positives = 81/256 (31%), Gaps = 39/256 (15%)

Query: 9   LSILSERGFIHQI----SNPRELDILCSQGVVTAYI--GYDLTASSLHAGHLTQLMLLFW 62
           L     RG +       +    +    + G   AY+  G   +A S+H GH+   +L  +
Sbjct: 143 LRHFFRRGIVFSHRDFGTALDCVRASFATGTHRAYLYTGRGPSAQSMHIGHVIPFLLTRY 202

Query: 63  LQKT-GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKT 121
           LQ   G   +  +        D         +   +     +E IK I +    +G    
Sbjct: 203 LQDALGLPLVIQITD------DEKHFFRDIPVSGERASGLVVENIKDIIA----FGFDPR 252

Query: 122 DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ- 180
              +  N  ++  +          +   V RML+  +V++    + S +  +  +  +Q 
Sbjct: 253 KTFIFRNTVYMGDMYP--------TVVQVQRMLTLSAVKNTFGLKDSDNVGKAAFPAVQA 304

Query: 181 AYDFVELAKN----------YDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLT 230
           A  F                  C +     DQ    +   ++  R+K      L +  L 
Sbjct: 305 APCFSSAFPRVLPRLAGDPPLKCIIPC-AIDQDPFFLLARNVAPRMKCCAPALLHTKFLP 363

Query: 231 TASGT--KMGKTLSGA 244
              G   KM  +  G 
Sbjct: 364 ALKGAQFKMSSSAEGN 379


>gi|327449339|gb|EGE95993.1| ribosomal protein S4 [Propionibacterium acnes HL013PA2]
          Length = 201

 Score = 41.0 bits (95), Expect = 0.40,   Method: Composition-based stats.
 Identities = 7/48 (14%), Positives = 19/48 (39%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
            ++ +AG A +  +AR+ +      +N   ++    ++   D      
Sbjct: 95  NVVYRAGLAATRRQARQMVSHGHFLVNGKKVNIPSYRVSTHDIIDVRE 142


>gi|327325138|gb|EGE66944.1| ribosomal protein S4 [Propionibacterium acnes HL096PA3]
          Length = 201

 Score = 41.0 bits (95), Expect = 0.40,   Method: Composition-based stats.
 Identities = 7/48 (14%), Positives = 19/48 (39%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
            ++ +AG A +  +AR+ +      +N   ++    ++   D      
Sbjct: 95  NVVYRAGLAATRRQARQMVSHGHFLVNGKKVNIPSYRVSTHDIIDVRE 142


>gi|297180260|gb|ADI16479.1| hypothetical protein [uncultured bacterium HF4000_05M23]
          Length = 208

 Score = 41.0 bits (95), Expect = 0.40,   Method: Composition-based stats.
 Identities = 17/65 (26%), Positives = 28/65 (43%), Gaps = 8/65 (12%)

Query: 342 SKDEVSRGMGLLTLI--------VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL 393
           S+ E   G  LL L+         + GFA S  +AR+ +    I++N   ++    Q+  
Sbjct: 80  SRLEGVTGDRLLQLLESRLDNVVYRLGFADSRPQARQIVGHGHIRVNGKKVNIPSYQVSP 139

Query: 394 QDFDS 398
            D  S
Sbjct: 140 GDRIS 144


>gi|254473658|ref|ZP_05087054.1| pseudouridylate synthase, subunit B protein [Pseudovibrio sp.
           JE062]
 gi|211957370|gb|EEA92574.1| pseudouridylate synthase, subunit B protein [Pseudovibrio sp.
           JE062]
          Length = 681

 Score = 41.0 bits (95), Expect = 0.40,   Method: Composition-based stats.
 Identities = 8/47 (17%), Positives = 21/47 (44%), Gaps = 1/47 (2%)

Query: 349 GMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           G  +   + +AG   S  EA   +++  + +N +++      +  +D
Sbjct: 36  GERIAKAMARAGLC-SRREAETWIEAGRVSVNGNVLDTPAFTVTQKD 81


>gi|281421747|ref|ZP_06252746.1| ribosomal large subunit pseudouridine synthase B [Prevotella copri
           DSM 18205]
 gi|281404242|gb|EFB34922.1| ribosomal large subunit pseudouridine synthase B [Prevotella copri
           DSM 18205]
          Length = 253

 Score = 41.0 bits (95), Expect = 0.40,   Method: Composition-based stats.
 Identities = 11/71 (15%), Positives = 31/71 (43%), Gaps = 1/71 (1%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           + +  + L   +  AG   S  EA   +++  + +N  +++    +I   D     +  +
Sbjct: 13  DPTEPLRLNKFLANAGVC-SRREADEFIQAGLVTVNGEVVTELGTKILRTDEVKFHDAPV 71

Query: 405 SFGKKNHIICH 415
           +  KK +++ +
Sbjct: 72  TLEKKVYVLLN 82


>gi|213966588|ref|ZP_03394739.1| tryptophanyl-tRNA synthetase [Pseudomonas syringae pv. tomato T1]
 gi|301384697|ref|ZP_07233115.1| tryptophanyl-tRNA synthetase [Pseudomonas syringae pv. tomato
           Max13]
 gi|302059816|ref|ZP_07251357.1| tryptophanyl-tRNA synthetase [Pseudomonas syringae pv. tomato K40]
 gi|302131762|ref|ZP_07257752.1| tryptophanyl-tRNA synthetase [Pseudomonas syringae pv. tomato NCPPB
           1108]
 gi|213928438|gb|EEB61982.1| tryptophanyl-tRNA synthetase [Pseudomonas syringae pv. tomato T1]
          Length = 449

 Score = 41.0 bits (95), Expect = 0.40,   Method: Composition-based stats.
 Identities = 18/94 (19%), Positives = 36/94 (38%), Gaps = 16/94 (17%)

Query: 166 EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-----TPK 220
           +  ++   ++Y +L A D + +   +   +   G DQ  ++    D+G+R         +
Sbjct: 126 DAGITMGLYSYPVLMAADIL-MFNAHQVPV---GRDQIQHVEMARDIGQRFNHLFGKGRE 181

Query: 221 LFAL-------TSPLLTTASGTKMGKTLSGAIWL 247
            F +       +   L    G KM K+    I L
Sbjct: 182 FFVMPEALIEESVATLPGLDGRKMSKSYDNTIPL 215


>gi|52081501|ref|YP_080292.1| putative pseudouridine synthase YtzF [Bacillus licheniformis ATCC
           14580]
 gi|52786879|ref|YP_092708.1| hypothetical protein BLi03154 [Bacillus licheniformis ATCC 14580]
 gi|319647410|ref|ZP_08001631.1| pseudouridine synthase [Bacillus sp. BT1B_CT2]
 gi|52004712|gb|AAU24654.1| putative Pseudouridine synthase YtzF [Bacillus licheniformis ATCC
           14580]
 gi|52349381|gb|AAU42015.1| putative protein [Bacillus licheniformis ATCC 14580]
 gi|317390456|gb|EFV71262.1| pseudouridine synthase [Bacillus sp. BT1B_CT2]
          Length = 240

 Score = 41.0 bits (95), Expect = 0.40,   Method: Composition-based stats.
 Identities = 11/45 (24%), Positives = 26/45 (57%), Gaps = 1/45 (2%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
           M L  L+  +G+  S  E ++ LK+ A+++N+ ++ + K  +  +
Sbjct: 1   MRLDKLLSNSGY-GSRKEVKKMLKNGAVRVNDQLVKDAKKHVDPE 44


>gi|28871564|ref|NP_794183.1| tryptophanyl-tRNA synthetase [Pseudomonas syringae pv. tomato str.
           DC3000]
 gi|37999380|sp|Q87WW4|SYW_PSESM RecName: Full=Tryptophanyl-tRNA synthetase; AltName:
           Full=Tryptophan--tRNA ligase; Short=TrpRS
 gi|28854815|gb|AAO57878.1| tryptophanyl-tRNA synthetase [Pseudomonas syringae pv. tomato str.
           DC3000]
 gi|331016712|gb|EGH96768.1| tryptophanyl-tRNA synthetase [Pseudomonas syringae pv. lachrymans
           str. M302278PT]
          Length = 449

 Score = 41.0 bits (95), Expect = 0.40,   Method: Composition-based stats.
 Identities = 18/94 (19%), Positives = 36/94 (38%), Gaps = 16/94 (17%)

Query: 166 EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-----TPK 220
           +  ++   ++Y +L A D + +   +   +   G DQ  ++    D+G+R         +
Sbjct: 126 DAGITMGLYSYPVLMAADIL-MFNAHQVPV---GRDQIQHVEMARDIGQRFNHLFGKGRE 181

Query: 221 LFAL-------TSPLLTTASGTKMGKTLSGAIWL 247
            F +       +   L    G KM K+    I L
Sbjct: 182 FFVMPEALIEESVATLPGLDGRKMSKSYDNTIPL 215


>gi|328859434|gb|EGG08543.1| hypothetical protein MELLADRAFT_34868 [Melampsora larici-populina
           98AG31]
          Length = 439

 Score = 41.0 bits (95), Expect = 0.41,   Method: Composition-based stats.
 Identities = 36/210 (17%), Positives = 64/210 (30%), Gaps = 47/210 (22%)

Query: 11  ILSERGFIHQISNPRELDILCSQGV--VTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGH 68
            L  R    ++   +EL  LC +    +T Y G   T    H G+   L  +    + G 
Sbjct: 21  ELITRNL-GEVLGSQELMKLCEEEGRLITCYWGTATTGRP-HIGYFVPLAKIADFLRAGV 78

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNN 128
           +   L+    + +      D  +  +  + I + +     I  +        T   +   
Sbjct: 79  RVKILLADVHAFL------DNLKAPL--ELINQRVSYYSYILRAVF------TSIGV--- 121

Query: 129 ETWLCSIKYIDLLREIGSFFSVNRMLSFES------VRSRLKREQSL---------SFLE 173
                 I  ++ +   GS +  +   + +       V  R  R+                
Sbjct: 122 -----PIDRLEFIT--GSSYQYSTPYNQDCLKLASLVSERDARKAGSEVVKESDTPPLSG 174

Query: 174 FNYMILQAYDFVELAKNYDCRLQMGGSDQW 203
             Y +LQA D   L        Q GG DQ 
Sbjct: 175 LLYPLLQALDEEYLK----VDFQFGGIDQR 200


>gi|320168995|gb|EFW45894.1| tyrosyl-tRNA synthetase [Capsaspora owczarzaki ATCC 30864]
          Length = 598

 Score = 41.0 bits (95), Expect = 0.41,   Method: Composition-based stats.
 Identities = 18/69 (26%), Positives = 23/69 (33%), Gaps = 4/69 (5%)

Query: 174 FNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTAS 233
             Y  LQA D   L        Q GG DQ             L   K   L +P++    
Sbjct: 109 LLYPGLQALDEEYLK----VDAQFGGVDQRKIFTFAEKYMPALGYKKRIHLMNPMVPGLQ 164

Query: 234 GTKMGKTLS 242
           G+KM  +  
Sbjct: 165 GSKMSSSEP 173


>gi|309356319|emb|CAP37361.2| CBR-WARS-1 protein [Caenorhabditis briggsae AF16]
          Length = 319

 Score = 41.0 bits (95), Expect = 0.41,   Method: Composition-based stats.
 Identities = 16/60 (26%), Positives = 23/60 (38%), Gaps = 1/60 (1%)

Query: 15  RGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +    LD          Y G   ++ SLH GHL   +   WLQ+    P+ +
Sbjct: 75  RGMFFAHRDFSAILDRKEQGKPFYLYTGRGASSGSLHLGHLVPFIFTKWLQEVFDVPLII 134


>gi|262195687|ref|YP_003266896.1| pseudouridine synthase [Haliangium ochraceum DSM 14365]
 gi|262079034|gb|ACY15003.1| pseudouridine synthase, RluA family [Haliangium ochraceum DSM
           14365]
          Length = 322

 Score = 41.0 bits (95), Expect = 0.41,   Method: Composition-based stats.
 Identities = 6/71 (8%), Positives = 23/71 (32%), Gaps = 11/71 (15%)

Query: 325 ECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSII 384
             F  +      P   +              +     A S ++ +R +   A++++ + +
Sbjct: 9   RRFRFAPGPDDEPRARLD-----------QFLTACELALSRSQVKRLIDEGAVQVDGAEV 57

Query: 385 SNEKLQIKLQD 395
                +++  +
Sbjct: 58  RKPGFKLQGGE 68


>gi|187734754|ref|YP_001876866.1| pseudouridine synthase [Akkermansia muciniphila ATCC BAA-835]
 gi|187424806|gb|ACD04085.1| pseudouridine synthase [Akkermansia muciniphila ATCC BAA-835]
          Length = 467

 Score = 41.0 bits (95), Expect = 0.41,   Method: Composition-based stats.
 Identities = 10/55 (18%), Positives = 23/55 (41%), Gaps = 1/55 (1%)

Query: 344 DEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
            E + G+ +   +   G   S   A R +    +++N  +I    +++  +DF  
Sbjct: 8   SEENGGIRINKFLASCGI-DSRRVADRLIGEGRVEVNGKVIDTPGMRVTEKDFVK 61


>gi|328952679|ref|YP_004370013.1| tryptophanyl-tRNA synthetase [Desulfobacca acetoxidans DSM 11109]
 gi|328453003|gb|AEB08832.1| tryptophanyl-tRNA synthetase [Desulfobacca acetoxidans DSM 11109]
          Length = 327

 Score = 41.0 bits (95), Expect = 0.41,   Method: Composition-based stats.
 Identities = 19/84 (22%), Positives = 31/84 (36%), Gaps = 12/84 (14%)

Query: 176 YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK--------TPKLFALTSP 227
           Y +LQA D + + K     +   G DQ  ++    ++  R           P+      P
Sbjct: 131 YPVLQAADIL-MYKANGVPV---GVDQLPHVELTREIARRCNFLYGKIFPEPEALLTEIP 186

Query: 228 LLTTASGTKMGKTLSGAIWLNKEM 251
            L    G KM K+    I+L+   
Sbjct: 187 KLCGTDGRKMSKSYQNCIYLSDTP 210


>gi|225569254|ref|ZP_03778279.1| hypothetical protein CLOHYLEM_05336 [Clostridium hylemonae DSM
           15053]
 gi|225162053|gb|EEG74672.1| hypothetical protein CLOHYLEM_05336 [Clostridium hylemonae DSM
           15053]
          Length = 247

 Score = 41.0 bits (95), Expect = 0.41,   Method: Composition-based stats.
 Identities = 12/61 (19%), Positives = 24/61 (39%), Gaps = 9/61 (14%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
           M L   + +AG   S  EA R ++   + ++    +   +Q+           ++  GKK
Sbjct: 1   MRLNKFLSEAGVC-SRREADRLIEEGRVTVDGKK-AVPGMQVDPSS-------EVRVGKK 51

Query: 410 N 410
            
Sbjct: 52  R 52


>gi|160946485|ref|ZP_02093694.1| hypothetical protein PEPMIC_00449 [Parvimonas micra ATCC 33270]
 gi|158447601|gb|EDP24596.1| hypothetical protein PEPMIC_00449 [Parvimonas micra ATCC 33270]
          Length = 1035

 Score = 41.0 bits (95), Expect = 0.41,   Method: Composition-based stats.
 Identities = 25/125 (20%), Positives = 38/125 (30%), Gaps = 18/125 (14%)

Query: 155 SFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQ---WGNIICGID 211
             + +        S+ F + +Y      +F EL           G DQ   W   +  I 
Sbjct: 513 EKDVIDVWFDSG-SMPFAQHHYPFENKENFGELFP---ADFISEGIDQTRGWFYSLLAIS 568

Query: 212 LGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVS 271
                K+P    L + L+    G KM K+    I        P   +  +     AD V 
Sbjct: 569 TLITGKSPYKNVLVNDLILDKDGKKMSKSRGNTI-------DPIELFDKY----GADAVR 617

Query: 272 FAKRL 276
           F    
Sbjct: 618 FYSLY 622


>gi|126275920|ref|XP_001386922.1| Cytoplasmic tryptophanyl-tRNA synthetase [Scheffersomyces stipitis
           CBS 6054]
 gi|126212791|gb|EAZ62899.1| Cytoplasmic tryptophanyl-tRNA synthetase [Pichia stipitis CBS 6054]
          Length = 424

 Score = 41.0 bits (95), Expect = 0.41,   Method: Composition-based stats.
 Identities = 14/60 (23%), Positives = 24/60 (40%), Gaps = 1/60 (1%)

Query: 15  RGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +  ++  L   G     Y G   ++ S+H GH+   +   WLQ     P+ +
Sbjct: 73  RGVFFSERDLTKILNLYEAGEPFFLYTGRGPSSDSMHLGHMIPFVFTKWLQDVFDVPLVI 132


>gi|329889172|ref|ZP_08267515.1| ribosomal large subunit pseudouridine synthase F [Brevundimonas
           diminuta ATCC 11568]
 gi|328844473|gb|EGF94037.1| ribosomal large subunit pseudouridine synthase F [Brevundimonas
           diminuta ATCC 11568]
          Length = 252

 Score = 41.0 bits (95), Expect = 0.41,   Method: Composition-based stats.
 Identities = 10/66 (15%), Positives = 26/66 (39%), Gaps = 4/66 (6%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD---FDSTGN 401
           +    + +   + ++G   S  EA   +    + I+  ++ +   +I+       + TG 
Sbjct: 8   DGPEPVRINKWLGQSGVC-SRREAEGLIADGLVSIDGEVVRDAGRKIEPGQTLTLNDTGE 66

Query: 402 IKLSFG 407
             L+ G
Sbjct: 67  AALAAG 72


>gi|324991874|gb|EGC23797.1| tryptophan--tRNA ligase [Streptococcus sanguinis SK405]
 gi|324996236|gb|EGC28146.1| tryptophan--tRNA ligase [Streptococcus sanguinis SK678]
 gi|327458498|gb|EGF04848.1| tryptophan--tRNA ligase [Streptococcus sanguinis SK1]
 gi|327471600|gb|EGF17043.1| tryptophan--tRNA ligase [Streptococcus sanguinis SK408]
 gi|327490330|gb|EGF22117.1| tryptophan--tRNA ligase [Streptococcus sanguinis SK1058]
          Length = 341

 Score = 41.0 bits (95), Expect = 0.41,   Method: Composition-based stats.
 Identities = 41/232 (17%), Positives = 64/232 (27%), Gaps = 48/232 (20%)

Query: 44  LTASSLHAGHLTQ-LMLLFWLQKTGHKPISLM----GGGTSIIGDPSFRDESRRMMRSQE 98
            T   LH GH    L     LQ  G   + +        T    DP              
Sbjct: 12  PTGK-LHIGHYVGSLRNRVLLQDQGKYEMFVFLADQQALTDHAKDPQ------------- 57

Query: 99  IQENIEKIKGIFSSFIK--YGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSF 156
             + +E I  +   ++       K    + +    L  +    +     +    N  +  
Sbjct: 58  --KIVESIGNVALDYLAAGLDPKKVTIFIQSQIPELAELSMYYMNLVSLARLERNPTVKT 115

Query: 157 ESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL 216
           E  +          FL   Y I QA D      N+   + +G  DQ   I    ++    
Sbjct: 116 EIAQKGFGESLPTGFL--VYPISQAADITAFKANF---VPVG-HDQKPMIEQTREIVRSF 169

Query: 217 KTPKLFALTSPL---------------LTTASGT-KMGKTLSGAIWLNKEMT 252
                   T  L               L    G  KM K+L+  I+L  +M 
Sbjct: 170 NNAYQ---TDVLVEPEGIYPENEAAGRLPGLDGNAKMSKSLNNGIYLADDMD 218


>gi|221310234|ref|ZP_03592081.1| pseudouridine synthase [Bacillus subtilis subsp. subtilis str. 168]
          Length = 245

 Score = 41.0 bits (95), Expect = 0.41,   Method: Composition-based stats.
 Identities = 13/62 (20%), Positives = 26/62 (41%), Gaps = 1/62 (1%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           EV     L  +I  AG   S  +A   +K   +K+N  +++   +++   D      +K+
Sbjct: 13  EVKDMERLQKVIAHAG-VASRRKAEELIKEGKVKVNGKVVTELGVKVTGSDQIEVNGLKV 71

Query: 405 SF 406
             
Sbjct: 72  ER 73


>gi|328863709|gb|EGG12808.1| hypothetical protein MELLADRAFT_51354 [Melampsora larici-populina
           98AG31]
          Length = 410

 Score = 41.0 bits (95), Expect = 0.42,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 24/63 (38%), Gaps = 1/63 (1%)

Query: 12  LSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           L  RG         + LD          Y G   +  S+H GH+   ++  WLQ+    P
Sbjct: 64  LLRRGMFFSHRELDQILDRYEQGKPFYLYTGRGPSTGSMHLGHMVPFIVTQWLQEVFDVP 123

Query: 71  ISL 73
           + +
Sbjct: 124 LVI 126


>gi|327312402|ref|YP_004327839.1| RluA family pseudouridine synthase [Prevotella denticola F0289]
 gi|326945177|gb|AEA21062.1| pseudouridine synthase, RluA family [Prevotella denticola F0289]
          Length = 319

 Score = 41.0 bits (95), Expect = 0.42,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 31/65 (47%), Gaps = 6/65 (9%)

Query: 346 VSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLS 405
           V+    LL  ++ A    S ++ +  L++  I++N S ++    Q+K  D      + +S
Sbjct: 40  VTEPAPLLEWLL-ANLKESKSKVKATLQNRGIRVNGSCVTQFDRQLKAGD-----KVSVS 93

Query: 406 FGKKN 410
             KKN
Sbjct: 94  KSKKN 98


>gi|314924148|gb|EFS87979.1| ribosomal protein S4 [Propionibacterium acnes HL001PA1]
          Length = 201

 Score = 41.0 bits (95), Expect = 0.42,   Method: Composition-based stats.
 Identities = 7/48 (14%), Positives = 19/48 (39%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
            ++ +AG A +  +AR+ +      +N   ++    ++   D      
Sbjct: 95  NVVYRAGLAATRRQARQMVSHGHFLVNGKKVNIPSYRVSTHDIIDVRE 142


>gi|255642475|gb|ACU21501.1| unknown [Glycine max]
          Length = 192

 Score = 41.0 bits (95), Expect = 0.42,   Method: Composition-based stats.
 Identities = 22/101 (21%), Positives = 35/101 (34%), Gaps = 1/101 (0%)

Query: 15  RGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +  E LD          Y G   ++ +LH GHL   M   +LQ     P+ +
Sbjct: 69  RGVFFAHRDFAEILDAYERGDKFYLYTGRGPSSEALHLGHLIPFMFTKYLQDVFKVPLVI 128

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFI 114
                      +   E  R +  +  ++ I     I  +FI
Sbjct: 129 QLTDDEKFFWKNLTIEECRRLARENAKDIIACGFDISKTFI 169


>gi|225681156|gb|EEH19440.1| tryptophanyl-tRNA synthetase [Paracoccidioides brasiliensis Pb03]
          Length = 465

 Score = 41.0 bits (95), Expect = 0.42,   Method: Composition-based stats.
 Identities = 16/87 (18%), Positives = 29/87 (33%), Gaps = 8/87 (9%)

Query: 15  RGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +    L+   +      Y G   +  +LH GH        WLQ     P+ +
Sbjct: 83  RGLFFSHRDFDHILNKYEAGEPFFMYTGRGPSTDALHLGHTIPFSFTKWLQDVFDVPLVI 142

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           M     + G+P+      + +    + 
Sbjct: 143 M-----LTGEPA--SNDEKALFKDNLN 162


>gi|198427140|ref|XP_002122401.1| PREDICTED: similar to Tryptophanyl-tRNA synthetase, cytoplasmic
           (Tryptophan--tRNA ligase) (TrpRS) [Ciona intestinalis]
          Length = 447

 Score = 41.0 bits (95), Expect = 0.42,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 28/63 (44%), Gaps = 7/63 (11%)

Query: 15  RGFIHQISNPRELDILCS----QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           RG      + RELD + +          Y G   ++ S+H GH+   M+  +LQ+    P
Sbjct: 79  RGMFF---SHRELDYILTLYEQNKPFYLYTGRGPSSQSMHVGHMIPFMMTQYLQEAFDVP 135

Query: 71  ISL 73
           + +
Sbjct: 136 VVV 138


>gi|163786974|ref|ZP_02181421.1| tryptophan--tRNA ligase [Flavobacteriales bacterium ALC-1]
 gi|159876862|gb|EDP70919.1| tryptophan--tRNA ligase [Flavobacteriales bacterium ALC-1]
          Length = 323

 Score = 41.0 bits (95), Expect = 0.42,   Method: Composition-based stats.
 Identities = 23/97 (23%), Positives = 34/97 (35%), Gaps = 18/97 (18%)

Query: 174 FNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP---KLFAL------ 224
           F Y +L A D +     YD  +   G DQ  +I    D+  R       + F L      
Sbjct: 125 FTYPMLMAADILL----YDAEIIPVGKDQEQHIEMTRDVASRFHAKMKGETFVLPKADIQ 180

Query: 225 --TSPLLTTASGTKMGKTLSG--AIWLNKEMTSPYNF 257
             T  L+    G KM K+      I+L ++       
Sbjct: 181 KDTM-LIPGTDGAKMSKSKGNIINIFLPEKKLRKQIM 216


>gi|31789454|gb|AAP58568.1| pseudouridylate synthase [uncultured Acidobacteria bacterium]
          Length = 317

 Score = 41.0 bits (95), Expect = 0.42,   Method: Composition-based stats.
 Identities = 24/128 (18%), Positives = 48/128 (37%), Gaps = 18/128 (14%)

Query: 300 KIIATEITTMVHGREEAEKAATAA--MECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV 357
           + + T  T    G +EA +    A       +   S  +P +      V     L  +I 
Sbjct: 5   RALKTFRTWRAEGNQEAGRRRQEAGGRSRRQLRSQSLSLPAVPGPCSLVFMEERLQKIIA 64

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGK--------- 408
            AG A S   A + + +  + +N  +++    ++  +      +IK+  GK         
Sbjct: 65  TAGIA-SRRHAEQLITAGEVTVNGKVVT----ELGTKADAQNDHIKVR-GKLINPTLKRV 118

Query: 409 -KNHIICH 415
            KN+I+ +
Sbjct: 119 EKNYILLN 126


>gi|189502681|ref|YP_001958398.1| hypothetical protein Aasi_1365 [Candidatus Amoebophilus asiaticus
           5a2]
 gi|189498122|gb|ACE06669.1| hypothetical protein Aasi_1365 [Candidatus Amoebophilus asiaticus
           5a2]
          Length = 322

 Score = 41.0 bits (95), Expect = 0.42,   Method: Composition-based stats.
 Identities = 19/81 (23%), Positives = 27/81 (33%), Gaps = 13/81 (16%)

Query: 174 FNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKLFALTSPLL-- 229
           F Y IL A D +     Y   +   G DQ  ++    D+          +F L   L+  
Sbjct: 125 FTYPILMAADILL----YHADIVPVGKDQLQHLEITRDIATSFNQQYGPVFHLPQALIDN 180

Query: 230 -----TTASGTKMGKTLSGAI 245
                    G KM K+    I
Sbjct: 181 SIATVPGIDGQKMSKSYHNTI 201


>gi|50843284|ref|YP_056511.1| 30S ribosomal protein S4 [Propionibacterium acnes KPA171202]
 gi|282855171|ref|ZP_06264503.1| ribosomal protein S4 [Propionibacterium acnes J139]
 gi|289424812|ref|ZP_06426594.1| ribosomal protein S4 [Propionibacterium acnes SK187]
 gi|289427659|ref|ZP_06429371.1| ribosomal protein S4 [Propionibacterium acnes J165]
 gi|295131353|ref|YP_003582016.1| ribosomal protein S4 [Propionibacterium acnes SK137]
 gi|61215507|sp|Q6A6R0|RS4_PROAC RecName: Full=30S ribosomal protein S4
 gi|50840886|gb|AAT83553.1| 30S ribosomal protein S4 [Propionibacterium acnes KPA171202]
 gi|282581759|gb|EFB87144.1| ribosomal protein S4 [Propionibacterium acnes J139]
 gi|289154775|gb|EFD03458.1| ribosomal protein S4 [Propionibacterium acnes SK187]
 gi|289159150|gb|EFD07342.1| ribosomal protein S4 [Propionibacterium acnes J165]
 gi|291375309|gb|ADD99163.1| ribosomal protein S4 [Propionibacterium acnes SK137]
 gi|313763204|gb|EFS34568.1| ribosomal protein S4 [Propionibacterium acnes HL013PA1]
 gi|313773119|gb|EFS39085.1| ribosomal protein S4 [Propionibacterium acnes HL074PA1]
 gi|313793291|gb|EFS41349.1| ribosomal protein S4 [Propionibacterium acnes HL110PA1]
 gi|313801065|gb|EFS42333.1| ribosomal protein S4 [Propionibacterium acnes HL110PA2]
 gi|313808806|gb|EFS47260.1| ribosomal protein S4 [Propionibacterium acnes HL087PA2]
 gi|313810400|gb|EFS48114.1| ribosomal protein S4 [Propionibacterium acnes HL083PA1]
 gi|313812264|gb|EFS49978.1| ribosomal protein S4 [Propionibacterium acnes HL025PA1]
 gi|313816541|gb|EFS54255.1| ribosomal protein S4 [Propionibacterium acnes HL059PA1]
 gi|313817985|gb|EFS55699.1| ribosomal protein S4 [Propionibacterium acnes HL046PA2]
 gi|313819898|gb|EFS57612.1| ribosomal protein S4 [Propionibacterium acnes HL036PA1]
 gi|313823389|gb|EFS61103.1| ribosomal protein S4 [Propionibacterium acnes HL036PA2]
 gi|313824860|gb|EFS62574.1| ribosomal protein S4 [Propionibacterium acnes HL063PA1]
 gi|313828398|gb|EFS66112.1| ribosomal protein S4 [Propionibacterium acnes HL063PA2]
 gi|313830102|gb|EFS67816.1| ribosomal protein S4 [Propionibacterium acnes HL007PA1]
 gi|313832626|gb|EFS70340.1| ribosomal protein S4 [Propionibacterium acnes HL056PA1]
 gi|313837982|gb|EFS75696.1| ribosomal protein S4 [Propionibacterium acnes HL086PA1]
 gi|314914365|gb|EFS78196.1| ribosomal protein S4 [Propionibacterium acnes HL005PA4]
 gi|314917685|gb|EFS81516.1| ribosomal protein S4 [Propionibacterium acnes HL050PA1]
 gi|314919583|gb|EFS83414.1| ribosomal protein S4 [Propionibacterium acnes HL050PA3]
 gi|314925755|gb|EFS89586.1| ribosomal protein S4 [Propionibacterium acnes HL036PA3]
 gi|314930173|gb|EFS94004.1| ribosomal protein S4 [Propionibacterium acnes HL067PA1]
 gi|314957154|gb|EFT01258.1| ribosomal protein S4 [Propionibacterium acnes HL027PA1]
 gi|314957795|gb|EFT01898.1| ribosomal protein S4 [Propionibacterium acnes HL002PA1]
 gi|314960835|gb|EFT04936.1| ribosomal protein S4 [Propionibacterium acnes HL002PA2]
 gi|314963509|gb|EFT07609.1| ribosomal protein S4 [Propionibacterium acnes HL082PA1]
 gi|314964877|gb|EFT08976.1| ribosomal protein S4 [Propionibacterium acnes HL082PA2]
 gi|314969908|gb|EFT14006.1| ribosomal protein S4 [Propionibacterium acnes HL037PA1]
 gi|314973049|gb|EFT17145.1| ribosomal protein S4 [Propionibacterium acnes HL053PA1]
 gi|314975545|gb|EFT19640.1| ribosomal protein S4 [Propionibacterium acnes HL045PA1]
 gi|314979766|gb|EFT23860.1| ribosomal protein S4 [Propionibacterium acnes HL072PA2]
 gi|314984828|gb|EFT28920.1| ribosomal protein S4 [Propionibacterium acnes HL005PA1]
 gi|314986087|gb|EFT30179.1| ribosomal protein S4 [Propionibacterium acnes HL005PA2]
 gi|314988702|gb|EFT32793.1| ribosomal protein S4 [Propionibacterium acnes HL005PA3]
 gi|315077130|gb|EFT49197.1| ribosomal protein S4 [Propionibacterium acnes HL053PA2]
 gi|315079817|gb|EFT51793.1| ribosomal protein S4 [Propionibacterium acnes HL078PA1]
 gi|315083184|gb|EFT55160.1| ribosomal protein S4 [Propionibacterium acnes HL027PA2]
 gi|315086862|gb|EFT58838.1| ribosomal protein S4 [Propionibacterium acnes HL002PA3]
 gi|315089954|gb|EFT61930.1| ribosomal protein S4 [Propionibacterium acnes HL072PA1]
 gi|315090476|gb|EFT62452.1| ribosomal protein S4 [Propionibacterium acnes HL110PA4]
 gi|315093709|gb|EFT65685.1| ribosomal protein S4 [Propionibacterium acnes HL060PA1]
 gi|315096724|gb|EFT68700.1| ribosomal protein S4 [Propionibacterium acnes HL038PA1]
 gi|315097952|gb|EFT69928.1| ribosomal protein S4 [Propionibacterium acnes HL059PA2]
 gi|315100595|gb|EFT72571.1| ribosomal protein S4 [Propionibacterium acnes HL046PA1]
 gi|315104001|gb|EFT75977.1| ribosomal protein S4 [Propionibacterium acnes HL050PA2]
 gi|315106038|gb|EFT78014.1| ribosomal protein S4 [Propionibacterium acnes HL030PA1]
 gi|315109198|gb|EFT81174.1| ribosomal protein S4 [Propionibacterium acnes HL030PA2]
 gi|327325233|gb|EGE67038.1| ribosomal protein S4 [Propionibacterium acnes HL096PA2]
 gi|327325529|gb|EGE67328.1| ribosomal protein S4 [Propionibacterium acnes HL103PA1]
 gi|327332742|gb|EGE74476.1| ribosomal protein S4 [Propionibacterium acnes HL097PA1]
 gi|327451455|gb|EGE98109.1| ribosomal protein S4 [Propionibacterium acnes HL087PA3]
 gi|327451570|gb|EGE98224.1| ribosomal protein S4 [Propionibacterium acnes HL092PA1]
 gi|327451857|gb|EGE98511.1| ribosomal protein S4 [Propionibacterium acnes HL083PA2]
 gi|328752071|gb|EGF65687.1| ribosomal protein S4 [Propionibacterium acnes HL087PA1]
 gi|328755531|gb|EGF69147.1| ribosomal protein S4 [Propionibacterium acnes HL025PA2]
 gi|328756316|gb|EGF69932.1| ribosomal protein S4 [Propionibacterium acnes HL020PA1]
 gi|328761350|gb|EGF74877.1| ribosomal protein S4 [Propionibacterium acnes HL099PA1]
 gi|332676223|gb|AEE73039.1| 30S ribosomal protein S4 [Propionibacterium acnes 266]
          Length = 201

 Score = 41.0 bits (95), Expect = 0.42,   Method: Composition-based stats.
 Identities = 7/48 (14%), Positives = 19/48 (39%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
            ++ +AG A +  +AR+ +      +N   ++    ++   D      
Sbjct: 95  NVVYRAGLAATRRQARQMVSHGHFLVNGKKVNIPSYRVSTHDIIDVRE 142


>gi|317485053|ref|ZP_07943935.1| tRNA synthetase class I [Bilophila wadsworthia 3_1_6]
 gi|316923588|gb|EFV44792.1| tRNA synthetase class I [Bilophila wadsworthia 3_1_6]
          Length = 364

 Score = 40.6 bits (94), Expect = 0.42,   Method: Composition-based stats.
 Identities = 39/235 (16%), Positives = 67/235 (28%), Gaps = 33/235 (14%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     LQ +G +  I +M      + D +   E  R    +   +
Sbjct: 11  PTGR-LHVGHYVGSLKRRVELQNSGKYDKIFIMIADAQALTDNAEHPEKVRQNIIEVALD 69

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
            +                K+   + +    LC + +  +     +    N  +  E    
Sbjct: 70  YLACG---------LDPVKSTMFIQSQIPELCELSFYYMNLVTVARLQRNPTVKSEIQMR 120

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQ------------WGNIICG 209
             +    + F  F Y I QA D       +       G DQ              N + G
Sbjct: 121 NFEASIPVGF--FTYPISQASDITA----FKATAVPVGEDQAPMLEQTKEIVRKFNAVYG 174

Query: 210 IDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNI 264
             L E             L       KM K+L   I+L ++        +   ++
Sbjct: 175 DTLVEPEMLLPDNKACLRLPGIDGKAKMSKSLGNCIYLGEDAD---EVKKKVMSM 226


>gi|295135677|ref|YP_003586353.1| 30S ribosomal protein S4 [Zunongwangia profunda SM-A87]
 gi|294983692|gb|ADF54157.1| 30S ribosomal protein S4 [Zunongwangia profunda SM-A87]
          Length = 201

 Score = 40.6 bits (94), Expect = 0.42,   Method: Composition-based stats.
 Identities = 14/82 (17%), Positives = 29/82 (35%), Gaps = 3/82 (3%)

Query: 320 ATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKI 379
                  F+ +  SQ + T  +        +    ++ + G A S   AR+ +    I +
Sbjct: 66  ERQFRNMFEKATRSQGI-TGEVLLQLCESRLD--NVVFRLGVAPSRRAARQLVSHRHITV 122

Query: 380 NNSIISNEKLQIKLQDFDSTGN 401
           N  +++    Q+K  D      
Sbjct: 123 NGELVNIPSYQLKAGDVVGVRE 144


>gi|212690553|ref|ZP_03298681.1| hypothetical protein BACDOR_00035 [Bacteroides dorei DSM 17855]
 gi|237707991|ref|ZP_04538472.1| tryptophanyl-tRNA synthetase II [Bacteroides sp. 9_1_42FAA]
 gi|237725263|ref|ZP_04555744.1| tryptophanyl-tRNA synthetase II [Bacteroides sp. D4]
 gi|265754223|ref|ZP_06089412.1| tryptophanyl-tRNA synthetase [Bacteroides sp. 3_1_33FAA]
 gi|212666902|gb|EEB27474.1| hypothetical protein BACDOR_00035 [Bacteroides dorei DSM 17855]
 gi|229436529|gb|EEO46606.1| tryptophanyl-tRNA synthetase II [Bacteroides dorei 5_1_36/D4]
 gi|229457977|gb|EEO63698.1| tryptophanyl-tRNA synthetase II [Bacteroides sp. 9_1_42FAA]
 gi|263234932|gb|EEZ20487.1| tryptophanyl-tRNA synthetase [Bacteroides sp. 3_1_33FAA]
          Length = 364

 Score = 40.6 bits (94), Expect = 0.42,   Method: Composition-based stats.
 Identities = 41/223 (18%), Positives = 71/223 (31%), Gaps = 28/223 (12%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN 102
            T   LH GH    +     LQ +G    + +      I D      +  +   +++++N
Sbjct: 13  PTGR-LHIGHYVGSLKRRVELQNSGLYDKTFI-----FIADAQ--ALTDNIENPEKVRQN 64

Query: 103 IEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR 162
           + ++   + +       K+   + +    LC + +  +     S    N  +  E     
Sbjct: 65  VIEVALDYMAVG-LDPMKSTIFIQSQIPELCELTFYYMDLVTVSRLQRNPTVKTEIQMRN 123

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQ------------WGNIICGI 210
            +    + F  F Y I QA D           + +G  DQ              N I G 
Sbjct: 124 FETSIPVGF--FTYPISQAADITAFKA---TTVPVG-EDQEPMIEQTREIVRRFNYIYGD 177

Query: 211 DLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTS 253
            L E        A    L  T    KM K+L   I+L+     
Sbjct: 178 TLVEPEILLPDNAACLRLPGTDGKAKMSKSLGNCIYLSDTADE 220


>gi|209548167|ref|YP_002280084.1| hemolysin A [Rhizobium leguminosarum bv. trifolii WSM2304]
 gi|209533923|gb|ACI53858.1| hemolysin A [Rhizobium leguminosarum bv. trifolii WSM2304]
          Length = 248

 Score = 40.6 bits (94), Expect = 0.42,   Method: Composition-based stats.
 Identities = 8/41 (19%), Positives = 17/41 (41%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
            L+V  G   S + AR  ++   ++I   +++     I   
Sbjct: 11  QLLVSRGLFASRSRARDAVQRGTVRIAGQVVTKAGALIGDD 51


>gi|154685576|ref|YP_001420737.1| tryptophanyl-tRNA synthetase [Bacillus amyloliquefaciens FZB42]
 gi|308173106|ref|YP_003919811.1| tryptophanyl-tRNA synthetase [Bacillus amyloliquefaciens DSM 7]
 gi|154351427|gb|ABS73506.1| TrpS [Bacillus amyloliquefaciens FZB42]
 gi|307605970|emb|CBI42341.1| tryptophanyl-tRNA synthetase [Bacillus amyloliquefaciens DSM 7]
 gi|328554052|gb|AEB24544.1| tryptophanyl-tRNA synthetase [Bacillus amyloliquefaciens TA208]
 gi|328911167|gb|AEB62763.1| tryptophanyl-tRNA synthetase [Bacillus amyloliquefaciens LL3]
          Length = 330

 Score = 40.6 bits (94), Expect = 0.42,   Method: Composition-based stats.
 Identities = 47/295 (15%), Positives = 92/295 (31%), Gaps = 46/295 (15%)

Query: 35  VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMM 94
             T + G   +  S+  G+    M  F   +  +     +    + I  P  R E R+  
Sbjct: 2   KKTIFSGIQPSG-SVTLGNYIGAMKQFVDLQHDYNGYFCIVDQHA-ITVPQDRLELRK-- 57

Query: 95  RSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRML 154
                      I+ + + ++  G     A +          +   +L+ +     + RM 
Sbjct: 58  ----------NIRNLAALYVAVGLDPEKATLFIQSEVPAHAQAGWMLQCVAYIGELERMT 107

Query: 155 SFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
                + + K ++++      Y  L A D +     Y   L   G DQ  ++    +L E
Sbjct: 108 Q---FKDKSKGKEAVVSGLLTYPPLMAGDILL----YGTDLVPVGEDQKQHLELTRNLAE 160

Query: 215 RLKTPKLFALTSPLLTTASG-----------TKMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
           R         T P +                 KM K+          +  P    +  ++
Sbjct: 161 RFNKKYNDIFTIPEVKIPESGARIMSLADPLKKMSKSDPNQKAYITLLDEPKQLEKKIKS 220

Query: 264 -IDDAD------------VVSFAKRLTTLPMSEIDR-MAKLQGKEINEAKKIIAT 304
            + D++            V +     + L  + I+   AK +GK   E K  +A 
Sbjct: 221 AVTDSEGIVKYDKENKPGVSNLLTIYSILGNTSIEELEAKYEGKGYGEFKSDLAE 275


>gi|15612239|ref|NP_223892.1| tryptophanyl-tRNA synthetase [Helicobacter pylori J99]
 gi|7994695|sp|Q9ZJX4|SYW_HELPJ RecName: Full=Tryptophanyl-tRNA synthetase; AltName:
           Full=Tryptophan--tRNA ligase; Short=TrpRS
 gi|4155771|gb|AAD06748.1| TRYPTOPHANYL-TRNA SYNTHETASE [Helicobacter pylori J99]
          Length = 326

 Score = 40.6 bits (94), Expect = 0.42,   Method: Composition-based stats.
 Identities = 49/304 (16%), Positives = 92/304 (30%), Gaps = 62/304 (20%)

Query: 34  GVVTAYIGYDLTASSLHAGHLTQLMLLFW--LQKTGHKPISLMGGGTSIIGDPSFRDESR 91
                + G   T   +H G+    +   W  LQ        ++      +          
Sbjct: 2   QKKRVFSGIQPTGQ-IHLGNYLGAIK-HWVELQDEYENLFCIVNSHAITLPIEPIFL--- 56

Query: 92  RMMRSQEIQENIEK--IKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFS 149
           +    + ++  +           FI+    +  A       WL   +         S   
Sbjct: 57  KSQTYELVKLLLACGISPKQSGLFIQSEVDEHPA-----LAWLLDCQV--------SMGE 103

Query: 150 VNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICG 209
           + RM  F+     LK  +S++   FNY IL A D +     Y   L   G DQ  ++   
Sbjct: 104 MQRMTQFKD--KSLKNPKSVNVGLFNYPILMASDILL----YQSDLVPVGEDQKQHLELT 157

Query: 210 IDLGERLKT--PKLFALTSPLLTTASG---------TKMGKTLSG---AIWLNKEMTSPY 255
            ++ E+        F +  PL+               KM K+  G   AI+L   +  P 
Sbjct: 158 RNVAEKFNRDFGNCFKVPEPLIAKVGARVMGLDDPKVKMSKSHKGANHAIFL---LDEPD 214

Query: 256 NFWQYWRNIDDADV---------------VSFAKRLTTLPMSEIDRMAKLQGKEINEAKK 300
              +  +      +               ++    L+     +I+   + +G    + KK
Sbjct: 215 VIVKKIKKAATDSMGVIAFDETREGVFNLLNIYMLLSDESPEKIEERFRNKG--YGDFKK 272

Query: 301 IIAT 304
            +A 
Sbjct: 273 ELAE 276


>gi|195128389|ref|XP_002008646.1| GI11697 [Drosophila mojavensis]
 gi|193920255|gb|EDW19122.1| GI11697 [Drosophila mojavensis]
          Length = 627

 Score = 40.6 bits (94), Expect = 0.43,   Method: Composition-based stats.
 Identities = 25/116 (21%), Positives = 39/116 (33%), Gaps = 18/116 (15%)

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT- 218
           +SR  R+  L    F Y +LQA D + L K     +   GSDQ  +I     L       
Sbjct: 99  KSRTVRDVPLGL--FVYPVLQAAD-IMLYKATHVPV---GSDQLQHIQLAQHLARAFNAR 152

Query: 219 -PKLFALTSPLLTTASG----------TKMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
              +F + + ++    G           KM K+            SP    +  + 
Sbjct: 153 YGDMFPVCNAIIEENDGSRILSLREPSKKMSKSDQNPKGTINLSDSPEQIIEKIKK 208


>gi|114566216|ref|YP_753370.1| tryptophan--tRNA ligase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
 gi|114337151|gb|ABI67999.1| tryptophanyl-tRNA synthetase [Syntrophomonas wolfei subsp. wolfei
           str. Goettingen]
          Length = 331

 Score = 40.6 bits (94), Expect = 0.43,   Method: Composition-based stats.
 Identities = 46/294 (15%), Positives = 83/294 (28%), Gaps = 51/294 (17%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
            T  SLH GH    +      +  +    ++    ++       +   R +         
Sbjct: 13  PTG-SLHLGHYVGSLANRVKLQDEYDSYIIIADVQALTTHWEKDENLSRDVFQIATDYLA 71

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL 163
             IK   S+                      I  I  L    S F+   +L         
Sbjct: 72  AGIKPEVSTIFIQSM----------------IPEIHELTMYYSMFTTVNVLRHNPTIKTE 115

Query: 164 KREQSLS---FLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK--- 217
             +  LS   +    Y + QA D      +    L   G DQ  +I     +  R     
Sbjct: 116 AAQHGLSDMTYGFLGYPVSQAADITIFKAD----LVPVGEDQIPHIELSRKIVRRFNELY 171

Query: 218 -----TPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQY-WRNIDDA--- 267
                 P++     P L    G  KM K+L+ AI+L           Q  W  + D    
Sbjct: 172 EPVLVEPQVLVGDVPRLVGLDGKDKMSKSLNNAIFLADSAD---EVKQKVWNAVTDPARI 228

Query: 268 -----------DVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMV 310
                       V ++ +      + E++   +       + KK +  ++  ++
Sbjct: 229 RKTDLGHPEVCTVYAYHQVFNKAEIEEVEADCRQGRIGCVQCKKNLTAKLNELL 282


>gi|260777457|ref|ZP_05886351.1| tryptophanyl-tRNA synthetase [Vibrio coralliilyticus ATCC BAA-450]
 gi|260607123|gb|EEX33397.1| tryptophanyl-tRNA synthetase [Vibrio coralliilyticus ATCC BAA-450]
          Length = 341

 Score = 40.6 bits (94), Expect = 0.43,   Method: Composition-based stats.
 Identities = 40/233 (17%), Positives = 76/233 (32%), Gaps = 41/233 (17%)

Query: 45  TASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIE 104
           T   LH GH    +      +  H    L+     +  +            S  I   + 
Sbjct: 21  TGP-LHLGHYVGSLKQRVALQETHDQTILVADMQGLTDNAH-----NPKKVSSNILNVVA 74

Query: 105 KIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK 164
               +          KT   + +    L  +          +  S++R+    +V++ ++
Sbjct: 75  DYLAVG-----IDPSKTTICLQSQLPALAELTMY-----YSNLVSISRLERNPTVKNEIQ 124

Query: 165 R---EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKL 221
               E+S+      Y I QA D       ++  L   G DQ   +    ++  ++ +  L
Sbjct: 125 NKGFERSIPAGFLTYPISQAADI----TGFNASLVPVGDDQLPMLEQTNEIVRKINS--L 178

Query: 222 FALTS-----PLLTT------ASGT-KMGKTLSGAIWLN----KEMTSPYNFW 258
             LT      PLL+         G  KM KT+   I L+    +  T+  + +
Sbjct: 179 AGLTVLNECRPLLSNAPRLPSTDGKNKMSKTMGNTINLSSTEKEIKTAVNSMY 231


>gi|228986430|ref|ZP_04146566.1| Tryptophanyl-tRNA synthetase [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|228773251|gb|EEM21681.1| Tryptophanyl-tRNA synthetase [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
          Length = 332

 Score = 40.6 bits (94), Expect = 0.43,   Method: Composition-based stats.
 Identities = 37/205 (18%), Positives = 58/205 (28%), Gaps = 40/205 (19%)

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLF 222
           L+ +  ++   + Y IL A D + L +     +   G DQ  +I    D+         F
Sbjct: 123 LEVDAGVNMGLYTYPILMAADIL-LFQATHVPV---GKDQIQHIEIARDIATYFN--HTF 176

Query: 223 ALTSPL-----------LTTASGTKMGKTLSGAIWL--NKEMTSPYNFWQYWRNIDDADV 269
             T  L           L    G KM K+    I L   +E      F     +    + 
Sbjct: 177 GRTFTLPEYVIQEEGAILPGLDGRKMSKSYGNVIPLFAEQEKLRKLIFKIKTDSSLPNEA 236

Query: 270 VSFAKRLT----TLPMSEIDRMAKLQGKEI--NEAKKII----------ATEITTMVHGR 313
                  T         E+  M +     I   + KK +            E   M    
Sbjct: 237 KELETLFTIYKEFATEDEMQSMREKYETGIGWGDVKKELFRVVDRELAGPREKYAMYMDE 296

Query: 314 -----EEAEKAATAAMECFDMSIHS 333
                E  EK A  A     +++  
Sbjct: 297 PNLLYEALEKGAEKARAIAKVNLAE 321


>gi|221058665|ref|XP_002259978.1| tryptophan--tRNA ligase [Plasmodium knowlesi strain H]
 gi|193810051|emb|CAQ41245.1| tryptophan--tRNA ligase, putative [Plasmodium knowlesi strain H]
          Length = 651

 Score = 40.6 bits (94), Expect = 0.43,   Method: Composition-based stats.
 Identities = 41/232 (17%), Positives = 76/232 (32%), Gaps = 35/232 (15%)

Query: 25  RELDILCS----QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSI 80
           R+LD L +          Y G   ++ S+H GHL       +LQ   + P+ +       
Sbjct: 289 RDLDFLLNYYEQNKCFYIYTGRGPSSLSMHLGHLIPFYFCKYLQDAFNVPLVI------- 341

Query: 81  IGDPSFRDESRRMMRSQEIQENIEKI-KGIFSSFIKYGTGKTDALMLNNETWLCSIKYID 139
                  D+ + +       E I  + +      I  G       +  N        Y  
Sbjct: 342 ----QMSDDEKFLFNQNYSLEYINTLTEENVKDIIAVGLNPELTFIFKNTK-YAGYLYPT 396

Query: 140 LLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ-AYDFVELAKNY-----DC 193
           +L  I    ++N+ ++            S +  + +Y   Q A  F +  + +      C
Sbjct: 397 VL-SIHKKTTLNQSMNVFGF------NHSDNIGKISYPSFQIAPCFSQCFEQFLPPNIPC 449

Query: 194 RLQMGGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTASGTKMGKTLS 242
            +  G  DQ        D+  ++   K   + ++  P L   + TKM  T  
Sbjct: 450 LVPQG-IDQDPYFRLSRDIAVKMALHKPVVVHSVFMPGLQGVN-TKMSSTKK 499


>gi|90422426|ref|YP_530796.1| pseudouridine synthase Rsu [Rhodopseudomonas palustris BisB18]
 gi|90104440|gb|ABD86477.1| Pseudouridine synthase, Rsu [Rhodopseudomonas palustris BisB18]
          Length = 743

 Score = 40.6 bits (94), Expect = 0.43,   Method: Composition-based stats.
 Identities = 10/50 (20%), Positives = 22/50 (44%), Gaps = 1/50 (2%)

Query: 348 RGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
            G  +  ++ +AG   S  +A   +    + +N  II++  L +  +D  
Sbjct: 421 AGERIAKVVSRAGLC-SRRDAEEWVTQGRVAVNGRIINSPALDVTTRDVI 469


>gi|298504578|gb|ADI83301.1| S4 domain protein [Geobacter sulfurreducens KN400]
          Length = 65

 Score = 40.6 bits (94), Expect = 0.44,   Method: Composition-based stats.
 Identities = 7/33 (21%), Positives = 15/33 (45%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNS 382
           + L + +  A    S  EA+  +   A+++N  
Sbjct: 8   IKLDSFLKAANLVASGGEAKIIIAEGAVRVNGE 40


>gi|11499766|ref|NP_071009.1| hypothetical protein AF2184 [Archaeoglobus fulgidus DSM 4304]
 gi|2648341|gb|AAB89068.1| conserved hypothetical protein [Archaeoglobus fulgidus DSM 4304]
          Length = 208

 Score = 40.6 bits (94), Expect = 0.44,   Method: Composition-based stats.
 Identities = 7/40 (17%), Positives = 21/40 (52%)

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
           L+V+ GF +S + A+  +K   + ++   ++    ++  +
Sbjct: 6   LLVRRGFFSSRSRAKEAIKKGFVLVDGKKVTKPSAEVDFE 45


>gi|254578488|ref|XP_002495230.1| ZYRO0B06380p [Zygosaccharomyces rouxii]
 gi|238938120|emb|CAR26297.1| ZYRO0B06380p [Zygosaccharomyces rouxii]
          Length = 430

 Score = 40.6 bits (94), Expect = 0.44,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 20/47 (42%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           LD+         Y G   ++ S+H GH+   +   WLQ     P+ +
Sbjct: 92  LDLYEQGKPFFLYTGRGPSSDSVHLGHMIPFIFTKWLQDVFDVPLVI 138


>gi|149916264|ref|ZP_01904785.1| NAD(P) transhydrogenase subunit alpha [Roseobacter sp. AzwK-3b]
 gi|149809924|gb|EDM69775.1| NAD(P) transhydrogenase subunit alpha [Roseobacter sp. AzwK-3b]
          Length = 348

 Score = 40.6 bits (94), Expect = 0.44,   Method: Composition-based stats.
 Identities = 6/29 (20%), Positives = 15/29 (51%)

Query: 370 RHLKSNAIKINNSIISNEKLQIKLQDFDS 398
           R +   A+ +N + +++ K +I   D  +
Sbjct: 39  RLIAEGAVSVNGTPVTDPKSRISEGDSIA 67


>gi|149203133|ref|ZP_01880104.1| lysyl-tRNA synthetase [Roseovarius sp. TM1035]
 gi|149143679|gb|EDM31715.1| lysyl-tRNA synthetase [Roseovarius sp. TM1035]
          Length = 524

 Score = 40.6 bits (94), Expect = 0.44,   Method: Composition-based stats.
 Identities = 17/85 (20%), Positives = 27/85 (31%), Gaps = 6/85 (7%)

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            DF           +M G D   N      +   L  P     T  L    SG K+ K+ 
Sbjct: 236 PDFGARWAALGVDFEMYGKDHSTNTPIYDGICRALGAPAPEHFTYELFLDESGQKISKSS 295

Query: 242 SGAIWLNKEMT------SPYNFWQY 260
              + +++ +T        Y  +Q 
Sbjct: 296 GNGVSIDEWLTYAATESLSYFMYQK 320


>gi|167036828|ref|YP_001664406.1| 30S ribosomal protein S4 [Thermoanaerobacter pseudethanolicus ATCC
           33223]
 gi|167039547|ref|YP_001662532.1| 30S ribosomal protein S4 [Thermoanaerobacter sp. X514]
 gi|256752659|ref|ZP_05493511.1| ribosomal protein S4 [Thermoanaerobacter ethanolicus CCSD1]
 gi|300915202|ref|ZP_07132517.1| ribosomal protein S4 [Thermoanaerobacter sp. X561]
 gi|307725126|ref|YP_003904877.1| 30S ribosomal protein S4 [Thermoanaerobacter sp. X513]
 gi|320115250|ref|YP_004185409.1| 30S ribosomal protein S4 [Thermoanaerobacter brockii subsp. finnii
           Ako-1]
 gi|226695091|sp|B0KCM7|RS4_THEP3 RecName: Full=30S ribosomal protein S4
 gi|226695092|sp|B0K5S0|RS4_THEPX RecName: Full=30S ribosomal protein S4
 gi|166853787|gb|ABY92196.1| RNA-binding S4 domain protein [Thermoanaerobacter sp. X514]
 gi|166855662|gb|ABY94070.1| RNA-binding S4 domain protein [Thermoanaerobacter pseudethanolicus
           ATCC 33223]
 gi|256748479|gb|EEU61531.1| ribosomal protein S4 [Thermoanaerobacter ethanolicus CCSD1]
 gi|300888926|gb|EFK84073.1| ribosomal protein S4 [Thermoanaerobacter sp. X561]
 gi|307582187|gb|ADN55586.1| ribosomal protein S4 [Thermoanaerobacter sp. X513]
 gi|319928341|gb|ADV79026.1| ribosomal protein S4 [Thermoanaerobacter brockii subsp. finnii
           Ako-1]
          Length = 206

 Score = 40.6 bits (94), Expect = 0.44,   Method: Composition-based stats.
 Identities = 15/61 (24%), Positives = 24/61 (39%), Gaps = 8/61 (13%)

Query: 349 GMGLLTLI--------VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG 400
           G  LL L+         + GFA S  +AR+ +    I++N   +      +K  D  S  
Sbjct: 89  GENLLQLLERRLDNVVFRLGFAASRPQARQLVSHGHIEVNGKKVDIPSFLVKPGDVISVR 148

Query: 401 N 401
            
Sbjct: 149 E 149


>gi|319790172|ref|YP_004151805.1| pseudouridine synthase [Thermovibrio ammonificans HB-1]
 gi|317114674|gb|ADU97164.1| pseudouridine synthase [Thermovibrio ammonificans HB-1]
          Length = 238

 Score = 40.6 bits (94), Expect = 0.45,   Method: Composition-based stats.
 Identities = 9/44 (20%), Positives = 23/44 (52%), Gaps = 1/44 (2%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL 393
           M L  L+ + GF  + ++ +R +K   +++N  ++ +   Q+  
Sbjct: 1   MRLDKLLAEGGF-GTRSQVKRLIKKGHVEVNGEVVKDPSFQVDP 43


>gi|309390297|gb|ADO78177.1| tryptophanyl-tRNA synthetase [Halanaerobium praevalens DSM 2228]
          Length = 333

 Score = 40.6 bits (94), Expect = 0.45,   Method: Composition-based stats.
 Identities = 42/226 (18%), Positives = 71/226 (31%), Gaps = 36/226 (15%)

Query: 31  CSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTS-IIGDPSFRDE 89
                   + G   T   +H G+    + L+   +  +  I  +    S  I +      
Sbjct: 1   MQAAKKRVFSGIQPTGK-IHIGNYVGALSLWVENQKKYDNIFCIVDLHSLTIPENIDPKY 59

Query: 90  SRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFS 149
            R+ ++          I    S+          A +    TWL        L  +     
Sbjct: 60  LRKKVKEIAALYLACGIDPQESTIFVQSHVPQHAEL----TWL--------LNCVTPMGW 107

Query: 150 VNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICG 209
           + RM      + + K+  S+S   F+Y +L A D +     Y   L   G DQ  +I   
Sbjct: 108 LQRMTQ---FKDKSKKSDSVSTALFDYPVLMASDILL----YQTDLVPVGEDQKQHIEIT 160

Query: 210 IDLGERLKTPKLFALTSPL---LTTASG----------TKMGKTLS 242
            D+ +R     L+  T  +   L   SG           KM K+  
Sbjct: 161 RDIAQRFN--HLYGDTFKIPKELIKKSGARIMGFDDPENKMSKSTG 204


>gi|258574259|ref|XP_002541311.1| U3 small nucleolar ribonucleoprotein protein IMP3 [Uncinocarpus
           reesii 1704]
 gi|237901577|gb|EEP75978.1| U3 small nucleolar ribonucleoprotein protein IMP3 [Uncinocarpus
           reesii 1704]
          Length = 196

 Score = 40.6 bits (94), Expect = 0.45,   Method: Composition-based stats.
 Identities = 8/56 (14%), Positives = 24/56 (42%)

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
           L+ + G   S + A + ++   +++   ++++    +     D    +  S  K+N
Sbjct: 127 LMSRNGMVESVSAAVKFIEQGHVRVGTEVVTDPAFLVTRNLEDYVTWVDSSKIKRN 182


>gi|222447091|pdb|3FHJ|E Chain E, Independent Saturation Of Three Trprs Subsites Generates A
           Partially-Assembled State Similar To Those Observed In
           Molecular Simulations
          Length = 293

 Score = 40.6 bits (94), Expect = 0.45,   Method: Composition-based stats.
 Identities = 41/222 (18%), Positives = 71/222 (31%), Gaps = 36/222 (16%)

Query: 143 EIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQ 202
           E+ +      ML        L+R   +S     Y  L A D +     Y+  +   G DQ
Sbjct: 77  EVPAHAQAAWMLQCIVYIGELERMTQVSAGLLTYPPLMAADILL----YNTDIVPVGEDQ 132

Query: 203 WGNIICGIDLGERLKT----------PKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMT 252
             +I    DL ER             PK+ A    L+      KM K+          + 
Sbjct: 133 KQHIELTRDLAERFNKRYFTIPEARIPKVGARIMSLVDPT--KKMSKSDPNPKAYITLLD 190

Query: 253 SPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT----- 307
                 +  ++   +++++    L+   + E++R  + +GK     K  +A  +      
Sbjct: 191 DAKTIEKKIKSPGISNLLNIYSTLSGQSIEELER--QYEGKGYGVFKADLAQVVIETLRP 248

Query: 308 --TMVHG-----------REEAEKAATAAMECFDMSIHSQHM 336
                H             E AEKA   A E       +  +
Sbjct: 249 IQERYHHWMESEELDRVLDEGAEKANRVASEMVRKMEQAMGL 290


>gi|32472413|ref|NP_865407.1| ribosomal large subunit pseudouridine synthase D [Rhodopirellula
           baltica SH 1]
 gi|32443649|emb|CAD73091.1| ribosomal large subunit pseudouridine synthase D [Rhodopirellula
           baltica SH 1]
          Length = 321

 Score = 40.6 bits (94), Expect = 0.45,   Method: Composition-based stats.
 Identities = 16/66 (24%), Positives = 27/66 (40%)

Query: 336 MPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           MP  S+S        G + +IV+    TS ++AR  +    + IN S   +    +K  D
Sbjct: 1   MPLTSVSTTVDETNEGRVDIIVRELSETSRSQARGMIDHGCVMINGSPCKSVGTTVKPGD 60

Query: 396 FDSTGN 401
             +   
Sbjct: 61  LVAVRY 66


>gi|312143949|ref|YP_003995395.1| tryptophanyl-tRNA synthetase [Halanaerobium sp. 'sapolanicus']
 gi|311904600|gb|ADQ15041.1| tryptophanyl-tRNA synthetase [Halanaerobium sp. 'sapolanicus']
          Length = 334

 Score = 40.6 bits (94), Expect = 0.45,   Method: Composition-based stats.
 Identities = 32/230 (13%), Positives = 70/230 (30%), Gaps = 29/230 (12%)

Query: 30  LCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDE 89
           + ++       G   T   LH GH    +      +  +    ++    ++  +      
Sbjct: 1   MSNKEKERILTGDRPTGK-LHLGHYVGSLQNRVELQEEYDTFLIIADVQALTTNF----- 54

Query: 90  SRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFS 149
            +     +++++                  KT   + +        +  +L        +
Sbjct: 55  EQPEKLGEDVRQVARDYLAAG-----IDPEKTTIFVQS-----MVPEIAELTIFFSMLVT 104

Query: 150 VNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY-DCRLQMGGSDQWGNIIC 208
           VN++    +++S         + E +Y  L          ++    L   G DQ  +I  
Sbjct: 105 VNQLRHNPTIKS---EADQYGYKEMSYGFLGYPVSQAADISFCRANLVPVGEDQIPHIEQ 161

Query: 209 GIDLGERLKT--------PKLFALTSPLLTTASGT-KMGKTLSGAIWLNK 249
              +  +           PK      P L    G  KM K+L+ AI+L+ 
Sbjct: 162 TRKIVRKFNNLYGEVFPEPKALISDFPRLMGLDGKSKMSKSLNNAIYLSD 211


>gi|255323628|ref|ZP_05364758.1| S4 domain protein [Campylobacter showae RM3277]
 gi|255299342|gb|EET78629.1| S4 domain protein [Campylobacter showae RM3277]
          Length = 257

 Score = 40.6 bits (94), Expect = 0.45,   Method: Composition-based stats.
 Identities = 10/51 (19%), Positives = 18/51 (35%), Gaps = 1/51 (1%)

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           S  EA   +K   + +N  +IS     +  +D        +   KK   + 
Sbjct: 17  SRREADELIKQGKVSVNGRVISELATSVSDEDKVKINGRIVRL-KKEFTMI 66


>gi|219117507|ref|XP_002179548.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217409439|gb|EEC49371.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 791

 Score = 40.6 bits (94), Expect = 0.45,   Method: Composition-based stats.
 Identities = 56/353 (15%), Positives = 115/353 (32%), Gaps = 40/353 (11%)

Query: 19  HQISNPRELDILCSQGVVT-------AYIGYDLTASSLHA--GHLTQLMLLFWLQKTGHK 69
            +  +  EL  L +             Y G++ +   +H   G + + M +      G  
Sbjct: 88  EECISGPELQTLLTAKGRGSESTGFNLYDGFEPSGR-MHIAQG-VFKAMNVNKCTYEGTN 145

Query: 70  PISLMG--GGTSIIGDPSFRD-ESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
              +       +++ D    D E  R +    I+        + +   K+ + +      
Sbjct: 146 ATFVFWVADWFALMNDKMGGDLEKIRTVGHYLIEVWKAAGMDLSNVVFKWASEEITTH-- 203

Query: 127 NNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
                     +  +L ++   F+V R+     +  RL+   SL+  +  Y ++Q  D   
Sbjct: 204 ------ADKYWPTML-DVARRFNVTRIKKCCQIMGRLEG--SLTAAQILYPLMQCTDVFF 254

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP-KLFALTSPLL--TTASGTKMGKTLSG 243
           L  +  C+L   G DQ    +   +  +      K   L+  +L    A   KM K+   
Sbjct: 255 LKADI-CQL---GVDQRKVNMLAREYCDAAGIKHKPIILSHHMLYGLKAGQEKMSKSDPD 310

Query: 244 AIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT-LPMSEIDRMAKLQGKEINEAKKII 302
           +    ++  S  +  +   N     V   A   T   P+        L+G  +      +
Sbjct: 311 SAVFMED--SAADVERKIMNAYCPIVAEVAAGATDGEPLDAGKESMHLKGDGLKN--PCL 366

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTL 355
                 +         A +   +  D         +  IS+DE+ RG+ ++ L
Sbjct: 367 DYIENIIFSPPGATFSAGSTTFQ--DYGAVRDAFLSKQISEDELKRGL-IIEL 416


>gi|15790214|ref|NP_280038.1| 30S ribosomal protein S4P [Halobacterium sp. NRC-1]
 gi|169235943|ref|YP_001689143.1| 30S ribosomal protein S4P [Halobacterium salinarum R1]
 gi|26399499|sp|Q9HQJ6|RS4_HALSA RecName: Full=30S ribosomal protein S4P
 gi|226699070|sp|B0R4Y0|RS4_HALS3 RecName: Full=30S ribosomal protein S4P
 gi|10580672|gb|AAG19518.1| 30S ribosomal protein S4P [Halobacterium sp. NRC-1]
 gi|167727009|emb|CAP13795.1| ribosomal protein S4 [Halobacterium salinarum R1]
          Length = 170

 Score = 40.6 bits (94), Expect = 0.45,   Method: Composition-based stats.
 Identities = 20/127 (15%), Positives = 45/127 (35%), Gaps = 11/127 (8%)

Query: 271 SFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMS 330
               R       E+ R          EA++++    T  V G E   +            
Sbjct: 28  DLLSRYGLKNKEELWRAQSELRDYRREARRLLGQ--TGTVSGEEFVARLQRI-------G 78

Query: 331 IHSQHMPTISISKDEVSRGM--GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEK 388
           I S+      +   EV+  +   L T++ + G A +  +AR+ +    + ++ S ++   
Sbjct: 79  ILSEEERLDDVLSLEVTDVLERRLQTVVYREGLANTMGQARQFVSHGHVTVDGSRVTEPS 138

Query: 389 LQIKLQD 395
             + + +
Sbjct: 139 YTVPVSE 145


>gi|327538476|gb|EGF25140.1| ribosomal large subunit pseudouridine synthase D [Rhodopirellula
           baltica WH47]
          Length = 321

 Score = 40.6 bits (94), Expect = 0.45,   Method: Composition-based stats.
 Identities = 16/66 (24%), Positives = 27/66 (40%)

Query: 336 MPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           MP  S+S        G + +IV+    TS ++AR  +    + IN S   +    +K  D
Sbjct: 1   MPLTSVSTTVDETNEGRVDIIVRELSETSRSQARGMIDHGCVMINGSPCKSVGTTVKPGD 60

Query: 396 FDSTGN 401
             +   
Sbjct: 61  LVAVRY 66


>gi|307266987|ref|ZP_07548503.1| ribosomal protein S4 [Thermoanaerobacter wiegelii Rt8.B1]
 gi|326390634|ref|ZP_08212189.1| ribosomal protein S4 [Thermoanaerobacter ethanolicus JW 200]
 gi|306917972|gb|EFN48230.1| ribosomal protein S4 [Thermoanaerobacter wiegelii Rt8.B1]
 gi|325993312|gb|EGD51749.1| ribosomal protein S4 [Thermoanaerobacter ethanolicus JW 200]
          Length = 206

 Score = 40.6 bits (94), Expect = 0.45,   Method: Composition-based stats.
 Identities = 15/61 (24%), Positives = 24/61 (39%), Gaps = 8/61 (13%)

Query: 349 GMGLLTLI--------VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG 400
           G  LL L+         + GFA S  +AR+ +    I++N   +      +K  D  S  
Sbjct: 89  GENLLQLLERRLDNVVYRLGFAASRPQARQLVSHGHIEVNGKKVDIPSFLVKPGDVISVR 148

Query: 401 N 401
            
Sbjct: 149 E 149


>gi|299783031|gb|ADJ41029.1| Ribosomal protein S4e [Lactobacillus fermentum CECT 5716]
          Length = 261

 Score = 40.6 bits (94), Expect = 0.45,   Method: Composition-based stats.
 Identities = 13/56 (23%), Positives = 25/56 (44%), Gaps = 3/56 (5%)

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD---STGNIKLS 405
           L  +V A F  S N A++ ++   +++N   I     ++  +D       G IK+ 
Sbjct: 186 LDAVVAASFNYSRNRAKQLIERGQVRVNWEEIDRPDYELASRDLISVRHGGRIKVQ 241


>gi|293605735|ref|ZP_06688111.1| conserved hypothetical protein [Achromobacter piechaudii ATCC
           43553]
 gi|292815860|gb|EFF74965.1| conserved hypothetical protein [Achromobacter piechaudii ATCC
           43553]
          Length = 81

 Score = 40.6 bits (94), Expect = 0.45,   Method: Composition-based stats.
 Identities = 10/69 (14%), Positives = 28/69 (40%)

Query: 336 MPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           MP I  +  + S  + +  L+   G   S    +  +    + +   + + +  +I+   
Sbjct: 1   MPLIEFTLADGSPYIEINQLLKATGVCDSGGAGKMMVADGHVSVGGVVETRKTAKIRGGQ 60

Query: 396 FDSTGNIKL 404
             + G+I++
Sbjct: 61  IVTIGDIRI 69


>gi|261199638|ref|XP_002626220.1| tryptophanyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081]
 gi|239594428|gb|EEQ77009.1| tryptophanyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081]
          Length = 437

 Score = 40.6 bits (94), Expect = 0.45,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 20/61 (32%), Gaps = 1/61 (1%)

Query: 15  RGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +    L+          Y G   +  +LH GH        WLQ     P+ +
Sbjct: 82  RGLFFSHRDFDNILNKYERGEPFFMYTGRGPSTDALHLGHTIPFSFTKWLQDVFDVPLVI 141

Query: 74  M 74
           M
Sbjct: 142 M 142


>gi|229197463|ref|ZP_04324190.1| Tryptophanyl-tRNA synthetase [Bacillus cereus m1293]
 gi|228586087|gb|EEK44178.1| Tryptophanyl-tRNA synthetase [Bacillus cereus m1293]
          Length = 327

 Score = 40.6 bits (94), Expect = 0.45,   Method: Composition-based stats.
 Identities = 30/159 (18%), Positives = 48/159 (30%), Gaps = 25/159 (15%)

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLF 222
           L+ +  ++   + Y IL A D + L +     +   G DQ  +I    D+         F
Sbjct: 118 LEVDAGVNMGLYTYPILMAADIL-LFQATHVPV---GKDQIQHIEIARDIATYFN--HTF 171

Query: 223 ALTSPL-----------LTTASGTKMGKTLSGAIWL--NKEMTSPYNFWQYWRNIDDADV 269
             T  L           L    G KM K+    I L   +E      F     +    + 
Sbjct: 172 GRTFTLPEYVIQEEAAILPGLDGRKMSKSYGNVIPLFAEQEKLRKLIFKIKTDSSLPNEA 231

Query: 270 VSFAKRLT----TLPMSEIDRMAKLQGKEI--NEAKKII 302
                  T         E+  M +     I   + KK +
Sbjct: 232 KELETLFTIYKEFATEDEMQSMREKYETGIGWGDVKKEL 270


>gi|83952843|ref|ZP_00961573.1| lysyl-tRNA synthetase [Roseovarius nubinhibens ISM]
 gi|83835978|gb|EAP75277.1| lysyl-tRNA synthetase [Roseovarius nubinhibens ISM]
          Length = 547

 Score = 40.6 bits (94), Expect = 0.45,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 28/85 (32%), Gaps = 6/85 (7%)

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            DF       D   +M G D   N      + E L   K    T  L     G K+ K+ 
Sbjct: 236 PDFGARWAALDVDFEMYGKDHSTNTPIYDRICEILGGRKPEHFTYELFLDDKGQKISKSS 295

Query: 242 SGAIWLNKEMT------SPYNFWQY 260
              I +++ +T        Y  +Q 
Sbjct: 296 GNGISIDEWLTYASTESLSYFMYQK 320


>gi|315604117|ref|ZP_07879183.1| cytotoxin/hemolysin [Actinomyces sp. oral taxon 180 str. F0310]
 gi|315313823|gb|EFU61874.1| cytotoxin/hemolysin [Actinomyces sp. oral taxon 180 str. F0310]
          Length = 275

 Score = 40.6 bits (94), Expect = 0.46,   Method: Composition-based stats.
 Identities = 11/58 (18%), Positives = 25/58 (43%), Gaps = 8/58 (13%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSII------SNEKLQIKLQDFDSTGNIKLSFG 407
           +V+ G A S + A R ++   +K++  ++       +    I + + D    +  S G
Sbjct: 10  LVRRGIAPSRSSAARMIEEGRVKLDGQVVLKAARQMDPAQAIVVAESDEADYV--SRG 65


>gi|315050009|ref|XP_003174379.1| tryptophanyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
 gi|311342346|gb|EFR01549.1| tryptophanyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
          Length = 449

 Score = 40.6 bits (94), Expect = 0.46,   Method: Composition-based stats.
 Identities = 13/52 (25%), Positives = 17/52 (32%), Gaps = 1/52 (1%)

Query: 15  RGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           RG      +    LD          Y G   ++ +LH GH        WLQ 
Sbjct: 80  RGLFFSHRDFDRILDKYEYGEPFFLYTGRGPSSDALHLGHTIPFAFTKWLQD 131


>gi|240278128|gb|EER41635.1| tryptophanyl-tRNA synthetase [Ajellomyces capsulatus H143]
 gi|325096190|gb|EGC49500.1| tryptophanyl-tRNA synthetase [Ajellomyces capsulatus H88]
          Length = 458

 Score = 40.6 bits (94), Expect = 0.46,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 20/61 (32%), Gaps = 1/61 (1%)

Query: 15  RGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +    L+          Y G   +  +LH GH        WLQ     P+ +
Sbjct: 82  RGLFFSHRDFDNILNKYERGEPFFMYTGRGPSTDALHLGHTIPFSFTKWLQDVFDVPLVI 141

Query: 74  M 74
           M
Sbjct: 142 M 142


>gi|225557490|gb|EEH05776.1| transfer RNA-Trp synthetase [Ajellomyces capsulatus G186AR]
          Length = 459

 Score = 40.6 bits (94), Expect = 0.46,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 20/61 (32%), Gaps = 1/61 (1%)

Query: 15  RGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +    L+          Y G   +  +LH GH        WLQ     P+ +
Sbjct: 82  RGLFFSHRDFDNILNKYERGEPFFMYTGRGPSTDALHLGHTIPFSFTKWLQDVFDVPLVI 141

Query: 74  M 74
           M
Sbjct: 142 M 142


>gi|184155056|ref|YP_001843396.1| hypothetical protein LAF_0580 [Lactobacillus fermentum IFO 3956]
 gi|183226400|dbj|BAG26916.1| conserved hypothetical protein [Lactobacillus fermentum IFO 3956]
          Length = 262

 Score = 40.6 bits (94), Expect = 0.46,   Method: Composition-based stats.
 Identities = 13/56 (23%), Positives = 25/56 (44%), Gaps = 3/56 (5%)

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD---STGNIKLS 405
           L  +V A F  S N A++ ++   +++N   I     ++  +D       G IK+ 
Sbjct: 187 LDAVVAASFNYSRNRAKQLIERGQVRVNWEEIDRPDYELASRDLISVRHGGRIKVQ 242


>gi|310816564|ref|YP_003964528.1| ribosomal large subunit pseudouridine synthase B
           [Ketogulonicigenium vulgare Y25]
 gi|308755299|gb|ADO43228.1| ribosomal large subunit pseudouridine synthase B
           [Ketogulonicigenium vulgare Y25]
          Length = 649

 Score = 40.6 bits (94), Expect = 0.46,   Method: Composition-based stats.
 Identities = 9/54 (16%), Positives = 24/54 (44%), Gaps = 1/54 (1%)

Query: 342 SKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
                + G  +  ++ +AG A S  +  R +    + +N  +I++  + +  +D
Sbjct: 12  DAAPAATGERIAKVLARAGIA-SRRDVERMILDGRVSVNGKVINSPAVNVADRD 64


>gi|260663600|ref|ZP_05864489.1| RNA-binding S4 domain-containing protein [Lactobacillus fermentum
           28-3-CHN]
 gi|260551826|gb|EEX24941.1| RNA-binding S4 domain-containing protein [Lactobacillus fermentum
           28-3-CHN]
          Length = 261

 Score = 40.6 bits (94), Expect = 0.46,   Method: Composition-based stats.
 Identities = 13/56 (23%), Positives = 25/56 (44%), Gaps = 3/56 (5%)

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD---STGNIKLS 405
           L  +V A F  S N A++ ++   +++N   I     ++  +D       G IK+ 
Sbjct: 186 LDAVVAASFNYSRNRAKQLIERGQVRVNWEEIDRPDYELASRDLISVRHGGRIKVQ 241


>gi|227514818|ref|ZP_03944867.1| ribosomal protein S4e [Lactobacillus fermentum ATCC 14931]
 gi|227086808|gb|EEI22120.1| ribosomal protein S4e [Lactobacillus fermentum ATCC 14931]
          Length = 262

 Score = 40.6 bits (94), Expect = 0.46,   Method: Composition-based stats.
 Identities = 13/56 (23%), Positives = 25/56 (44%), Gaps = 3/56 (5%)

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD---STGNIKLS 405
           L  +V A F  S N A++ ++   +++N   I     ++  +D       G IK+ 
Sbjct: 187 LDAVVAASFNYSRNRAKQLIERGQVRVNWEEIDRPDYELASRDLISVRHGGRIKVQ 242


>gi|76803069|ref|YP_331164.1| 30S ribosomal protein S4e [Natronomonas pharaonis DSM 2160]
 gi|121731890|sp|Q3IMX6|RS4E_NATPD RecName: Full=30S ribosomal protein S4e
 gi|76558934|emb|CAI50530.1| ribosomal protein S4.eR [Natronomonas pharaonis DSM 2160]
          Length = 237

 Score = 40.6 bits (94), Expect = 0.46,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 1/53 (1%)

Query: 347 SRGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
             G+ LL ++    G+  S  EAR  L+ ++I IN + +S+E+  + + D  +
Sbjct: 34  EEGVPLLIVLRDVLGYVDSKKEARYALEQDSILINGTAVSDERRPVGMFDILA 86


>gi|268567229|ref|XP_002647748.1| C. briggsae CBR-WRS-1 protein [Caenorhabditis briggsae]
          Length = 315

 Score = 40.6 bits (94), Expect = 0.46,   Method: Composition-based stats.
 Identities = 16/60 (26%), Positives = 23/60 (38%), Gaps = 1/60 (1%)

Query: 15  RGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +    LD          Y G   ++ SLH GHL   +   WLQ+    P+ +
Sbjct: 75  RGMFFAHRDFSAILDRKEQGKPFYLYTGRGASSGSLHLGHLVPFIFTKWLQEVFDVPLII 134


>gi|327444033|gb|EGE90687.1| ribosomal protein S4 [Propionibacterium acnes HL043PA1]
 gi|327449433|gb|EGE96087.1| ribosomal protein S4 [Propionibacterium acnes HL043PA2]
          Length = 201

 Score = 40.6 bits (94), Expect = 0.46,   Method: Composition-based stats.
 Identities = 7/43 (16%), Positives = 16/43 (37%)

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
           AG A +  +AR+ +      +N   ++    ++   D      
Sbjct: 100 AGLAATRRQARQMVSHGHFLVNGKKVNIPSYRVSTHDIIDVRE 142


>gi|289640610|ref|ZP_06472782.1| tryptophanyl-tRNA synthetase [Frankia symbiont of Datisca
           glomerata]
 gi|289509499|gb|EFD30426.1| tryptophanyl-tRNA synthetase [Frankia symbiont of Datisca
           glomerata]
          Length = 342

 Score = 40.6 bits (94), Expect = 0.46,   Method: Composition-based stats.
 Identities = 36/237 (15%), Positives = 70/237 (29%), Gaps = 34/237 (14%)

Query: 29  ILCSQGVVTAYI-GYDLTASSLHAGHLTQLML--LFWLQKTGHKPISLMGGGTS--IIGD 83
            L S   V   + G   T    H G+    +   L   ++   + +  +    +   + D
Sbjct: 2   RLMSASPVKISLTGIKPTGEP-HLGNYVGAIKPALRLAEEY--EAMYFIADYHALTTVRD 58

Query: 84  PSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLRE 143
           P       R + +  I   ++  + +F            A +      L  +    L+  
Sbjct: 59  PKLLRHYTRSVAATWIAAGLDPDQVVFYRQSDIPEIPELAWI------LSCLTGKGLMNR 112

Query: 144 IGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQW 203
             ++ +            R   +  ++   +NY +L A D + +           G DQ 
Sbjct: 113 AHAYKAAR---DRNQEAGRADLDAGINMGLYNYPVLMAVDILIM----GTDAVPVGRDQM 165

Query: 204 GNIICGIDLGERLKT----------PKLF---ALTSPLLTTASGTKMGKTLSGAIWL 247
            ++    D+                P+     A T   L    G KM K+    I L
Sbjct: 166 QHVEIAADIAGSFNHVYGDSFRLKIPQAIVPDAETGRTLPGLDGRKMSKSYDNTIPL 222


>gi|288560750|ref|YP_003424236.1| tryptophanyl-tRNA synthetase TrpS [Methanobrevibacter ruminantium
           M1]
 gi|288543460|gb|ADC47344.1| tryptophanyl-tRNA synthetase TrpS [Methanobrevibacter ruminantium
           M1]
          Length = 363

 Score = 40.6 bits (94), Expect = 0.46,   Method: Composition-based stats.
 Identities = 39/252 (15%), Positives = 83/252 (32%), Gaps = 33/252 (13%)

Query: 12  LSERGFIHQISNPRELDILCSQGV-VTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           L +RG I    +  +L  L + G       G   +   +H GH   +  L W  K G   
Sbjct: 37  LMKRGVIFGHRDFDKLVPLINGGKDFAVMTGMMPSGQ-MHIGHKMVIDQLNWYFKKGASL 95

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
              +    S        ++++ +          E +K   +  +       +  + +   
Sbjct: 96  SLSIADMESYAARGISFNQAKDI-------AINEYLKNYIALGLDLTADNVNVYLQSQNK 148

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF-VELAK 189
            L  + +     ++    + N M       +     +S +       ++Q  D  +   +
Sbjct: 149 TLNDLTF-----KLAKKVNFNNM------HAIYGFNESTNIAHLYVPLVQVADILLPQTE 197

Query: 190 NYDCRLQM---GGSDQWGNIICGIDLGERLKTPKLFALTSPL------LTTASGTKMGKT 240
            +    Q+    G DQ  ++    D+  ++     +   +P       LT  +G KM  +
Sbjct: 198 EFGGPKQVVVPVGVDQDPHLRLTRDIAAKMNEE--YGFLAPASTYHRFLTGLTGDKMSSS 255

Query: 241 LSG-AIWLNKEM 251
               AI+LN+  
Sbjct: 256 KPNTAIYLNETP 267


>gi|256847597|ref|ZP_05553042.1| tryptophanyl-tRNA synthetase [Lactobacillus coleohominis 101-4-CHN]
 gi|256715286|gb|EEU30262.1| tryptophanyl-tRNA synthetase [Lactobacillus coleohominis 101-4-CHN]
          Length = 338

 Score = 40.6 bits (94), Expect = 0.46,   Method: Composition-based stats.
 Identities = 38/234 (16%), Positives = 73/234 (31%), Gaps = 33/234 (14%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN 102
            T   LH GH    +     +Q +    + +M      I D      +      ++IQ++
Sbjct: 13  PTGK-LHIGHYVGSLKNRVKMQNSDKYQMFVM------IADQQ--ALTDNAKNPKKIQDS 63

Query: 103 IEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIG-SFFSVNRMLSFESVRS 161
           + ++  +    +     KT   + +    L  +     L  +  S    N  +  E  + 
Sbjct: 64  LAQV-ALDYLGVGLNPEKTTLYVQSQIPALSELNMY-FLNLVTVSRLERNPTVKSEIQQK 121

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKL 221
              R     FL   Y + Q  D       +   L   G DQ   +    ++     +   
Sbjct: 122 HFDRSIPAGFL--TYPVSQTADIAA----FKASLIPVGDDQEPMLEQAREIIHSFNSTYG 175

Query: 222 FALTSP----------LLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNI 264
             L  P           +    G  KM K+L   I+L+ +  +     +   +I
Sbjct: 176 NVLVEPEGVFPPKGQGRIPGLDGNAKMSKSLGNTIYLSDDEDT---LKKKVMSI 226


>gi|239615600|gb|EEQ92587.1| tryptophanyl-tRNA synthetase [Ajellomyces dermatitidis ER-3]
          Length = 460

 Score = 40.6 bits (94), Expect = 0.46,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 20/61 (32%), Gaps = 1/61 (1%)

Query: 15  RGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +    L+          Y G   +  +LH GH        WLQ     P+ +
Sbjct: 82  RGLFFSHRDFDNILNKYERGEPFFMYTGRGPSTDALHLGHTIPFSFTKWLQDVFDVPLVI 141

Query: 74  M 74
           M
Sbjct: 142 M 142


>gi|254453766|ref|ZP_05067203.1| ribosomal large subunit pseudouridine synthase [Octadecabacter
           antarcticus 238]
 gi|198268172|gb|EDY92442.1| ribosomal large subunit pseudouridine synthase [Octadecabacter
           antarcticus 238]
          Length = 328

 Score = 40.6 bits (94), Expect = 0.46,   Method: Composition-based stats.
 Identities = 10/50 (20%), Positives = 22/50 (44%), Gaps = 1/50 (2%)

Query: 348 RGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
            G  +  ++ +AG   S  EA + +++  + +N   I    L +  +D  
Sbjct: 21  PGDRIAKVLARAG-VASRREAEKIIEAGRVTVNGKTILTPALNVTDKDRI 69


>gi|218437902|ref|YP_002376231.1| hemolysin A [Cyanothece sp. PCC 7424]
 gi|218170630|gb|ACK69363.1| hemolysin A [Cyanothece sp. PCC 7424]
          Length = 270

 Score = 40.6 bits (94), Expect = 0.46,   Method: Composition-based stats.
 Identities = 12/62 (19%), Positives = 25/62 (40%), Gaps = 6/62 (9%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF--DSTGNIKLSFG---- 407
            L+V     +S   A+R +++  +++N  II     ++            + +S G    
Sbjct: 8   NLLVTLNLCSSRQLAQRLIRAGEVRVNQQIIDKPGTEVDPGAEIQLQAKPLYVSRGGEKL 67

Query: 408 KK 409
           KK
Sbjct: 68  KK 69


>gi|326796385|ref|YP_004314205.1| pseudouridine synthase Rsu [Marinomonas mediterranea MMB-1]
 gi|326547149|gb|ADZ92369.1| pseudouridine synthase Rsu [Marinomonas mediterranea MMB-1]
          Length = 228

 Score = 40.6 bits (94), Expect = 0.47,   Method: Composition-based stats.
 Identities = 10/53 (18%), Positives = 23/53 (43%), Gaps = 2/53 (3%)

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQ-DFDSTGNIKLSFGKKNHIICH 415
           S  EA+R +    I++N  +++     +      +S G + L   K+ +   +
Sbjct: 14  SRKEAKRFIAKGKIRVNGDVVTKPNASVTEDCKVESHGEVILWR-KEKYFALY 65


>gi|323139327|ref|ZP_08074379.1| tryptophanyl-tRNA synthetase [Methylocystis sp. ATCC 49242]
 gi|322395393|gb|EFX97942.1| tryptophanyl-tRNA synthetase [Methylocystis sp. ATCC 49242]
          Length = 366

 Score = 40.6 bits (94), Expect = 0.47,   Method: Composition-based stats.
 Identities = 52/349 (14%), Positives = 97/349 (27%), Gaps = 66/349 (18%)

Query: 45  TASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIE 104
           T   LH GH    +      +  H+   L+    ++  +     + RR      + E   
Sbjct: 18  TGP-LHLGHFVGSLRNRVALQHSHRQYLLLADAQALTDNAHDPGKVRR-----NVLEVAL 71

Query: 105 KIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-L 163
               +         G T   + +    L  +  +  L  +            E +++R  
Sbjct: 72  DYLAVG-----IDPGVTTICLQSALPALAELTML-YLNFVTVARLERNPTIKEEIQARGF 125

Query: 164 KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQ------------WGNIICGID 211
            R+    F+   Y   QA D       +   +   G DQ              N   G D
Sbjct: 126 GRDIPAGFI--CYPAAQAADITA----FRATIVPVGEDQAPLIEQTNEIVRRINRQAGRD 179

Query: 212 -------LGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
                  L   +            L    G  KM K+   AI L+               
Sbjct: 180 ILAEARALIPEMGR----------LPGVDGKAKMSKSQGNAIPLSASDAEIAEAVNRMYT 229

Query: 264 IDDAD------------VVSFAKRL-TTLP-MSEIDRMAKLQGKEINEAKKIIATEITTM 309
             D              V ++          ++E+    +  G      K+ +A+ +  +
Sbjct: 230 DPDHLRVSDPGRVEGNVVFTYLDAFDEDRDALNELKAHYRRGGLGDMTLKQRLASILREI 289

Query: 310 VHGREEAEKAATAAMECFDMSIHSQHM---PTISISKDEVSRGMGLLTL 355
           V    E   A     +     I +  +       ++ +E+S  +GL +L
Sbjct: 290 VGPIRERRAALARDPDHVLDIIRTGTLAGRERTKVTLEEISTALGLFSL 338


>gi|312880188|ref|ZP_07739988.1| hemolysin A [Aminomonas paucivorans DSM 12260]
 gi|310783479|gb|EFQ23877.1| hemolysin A [Aminomonas paucivorans DSM 12260]
          Length = 270

 Score = 40.6 bits (94), Expect = 0.47,   Method: Composition-based stats.
 Identities = 12/57 (21%), Positives = 25/57 (43%), Gaps = 3/57 (5%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ---DFDSTGNIKLSFG 407
            L+ + G ATS  EA+R ++   ++++  +I      +        D+     +S G
Sbjct: 10  QLLAERGLATSRTEAQRWIEEGRVRVDGFVIVKPASLVDPDQGIQVDTPKETWVSRG 66


>gi|331252013|ref|XP_003338582.1| hypothetical protein PGTG_20023 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
 gi|309317572|gb|EFP94163.1| hypothetical protein PGTG_20023 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
          Length = 399

 Score = 40.6 bits (94), Expect = 0.47,   Method: Composition-based stats.
 Identities = 21/111 (18%), Positives = 42/111 (37%), Gaps = 16/111 (14%)

Query: 299 KKIIATEITTMVHGREEAEK--------------AATAAMECFDMSIHSQHMPTISISKD 344
           +K  +  +T   HG    EK              A  ++++        + +P  ++   
Sbjct: 51  QKWRSKAVTRAYHGDWIQEKKFKRHYLPASLPALAVKSSLKKSRYGNREEKVPLAALMYQ 110

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           E+ R + +  +     FA S  EARR +   A+K+N    +    ++   D
Sbjct: 111 ELERRLDVA-IFRSC-FADSVYEARRIVIHGAVKLNGVKCNAPWTRLHPGD 159


>gi|227356086|ref|ZP_03840477.1| tryptophanyl-tRNA synthetase [Proteus mirabilis ATCC 29906]
 gi|227163863|gb|EEI48771.1| tryptophanyl-tRNA synthetase [Proteus mirabilis ATCC 29906]
          Length = 339

 Score = 40.6 bits (94), Expect = 0.47,   Method: Composition-based stats.
 Identities = 36/228 (15%), Positives = 68/228 (29%), Gaps = 31/228 (13%)

Query: 45  TASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIE 104
           T   LH GH    +      +       LM     +  + S  ++  + +          
Sbjct: 19  TGP-LHLGHYIGSLQQRVEFQNKATQYILMADMQGLTDNGSTPEKVSKFLFDVVADYLAV 77

Query: 105 KIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK 164
            I    S+            + +    L  +  + L     S    N  +  E ++  L 
Sbjct: 78  GIDPKLSTL----------CLQSALPALSELTMLYLNIVTVSRLERNPTVKHEILQKNLS 127

Query: 165 REQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT------ 218
           R     FL   Y + QA D    + +    +   G DQ   I    ++  ++ +      
Sbjct: 128 RSLPAGFL--TYPVSQAADITAFSAD----IVPAGEDQLPMIEQTNEIVTKINSLIGQPV 181

Query: 219 ----PKLFALTSPLLTTASGTKMGKTLSGAIWL----NKEMTSPYNFW 258
                 +      L  T    KM K+L   I L    ++   + Y+ +
Sbjct: 182 LTSCKVVVGQVGRLPGTDGSGKMSKSLGNTINLSSTADEIKKAVYSMY 229


>gi|89098097|ref|ZP_01170983.1| tryptophanyl-tRNA synthetase [Bacillus sp. NRRL B-14911]
 gi|89087260|gb|EAR66375.1| tryptophanyl-tRNA synthetase [Bacillus sp. NRRL B-14911]
          Length = 329

 Score = 40.6 bits (94), Expect = 0.47,   Method: Composition-based stats.
 Identities = 49/299 (16%), Positives = 93/299 (31%), Gaps = 46/299 (15%)

Query: 37  TAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRS 96
           T + G   + + L  G+    M  F   +  +     +    + I     R E R+ +RS
Sbjct: 3   TIFSGIQPSGT-LTLGNYIGAMKQFVELQNEYNCYFCIVDQHA-ITVQQDRMELRKNIRS 60

Query: 97  QEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSF 156
                    I    ++          A       W+  ++ +  + E+       RM   
Sbjct: 61  LAALYLAVGIDPEKATLFIQSEVPAHAQ----AGWM--MQCVSYIGEL------ERMTQ- 107

Query: 157 ESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL 216
              + +   ++++S     Y  L A D +     Y   L   G DQ  ++    DL ER 
Sbjct: 108 --FKDKSHGKEAVSSGLLTYPPLMAADILL----YKTDLVPVGEDQKQHLELTRDLAERF 161

Query: 217 KTPKLFALTSPLLTTAS-----------GTKMGKTLSGAIWLNKEMTSPYNFWQYWRN-I 264
                   T P +  A              KM K+ S        +  P    +  ++ +
Sbjct: 162 NKKYNDIFTIPEVRIAKVGARVMSLQDPAKKMSKSDSNKKSFISLLDDPKQIEKKIKSAV 221

Query: 265 DDAD------------VVSFAKRLTTLPMSEIDRMAKL-QGKEINEAKKIIATEITTMV 310
            D++            V +     + L    ID +    +GK   + K  +A  +   +
Sbjct: 222 TDSEGIVKFDKENKPGVSNLLSIYSILSGRTIDEIEAQYEGKGYGDFKGDLAKVVVDTI 280


>gi|327354223|gb|EGE83080.1| tryptophanyl-tRNA synthetase [Ajellomyces dermatitidis ATCC 18188]
          Length = 460

 Score = 40.6 bits (94), Expect = 0.47,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 20/61 (32%), Gaps = 1/61 (1%)

Query: 15  RGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +    L+          Y G   +  +LH GH        WLQ     P+ +
Sbjct: 82  RGLFFSHRDFDNILNKYERGEPFFMYTGRGPSTDALHLGHTIPFSFTKWLQDVFDVPLVI 141

Query: 74  M 74
           M
Sbjct: 142 M 142


>gi|259503039|ref|ZP_05745941.1| S4 domain-containing protein YlmH [Lactobacillus antri DSM 16041]
 gi|259168905|gb|EEW53400.1| S4 domain-containing protein YlmH [Lactobacillus antri DSM 16041]
          Length = 260

 Score = 40.6 bits (94), Expect = 0.47,   Method: Composition-based stats.
 Identities = 16/66 (24%), Positives = 28/66 (42%), Gaps = 10/66 (15%)

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD---STGNIKL----- 404
           L  +V AGF  S N A++ ++   +++N   +     Q+ + D       G I+L     
Sbjct: 185 LDAVVAAGFNYSRNRAKQLVEHGQVRLNWEEVDRPDEQVVVHDLISVRHGGRIRLDETHG 244

Query: 405 --SFGK 408
               GK
Sbjct: 245 VTRKGK 250


>gi|116333110|ref|YP_794637.1| tryptophanyl-tRNA synthetase II [Lactobacillus brevis ATCC 367]
 gi|116098457|gb|ABJ63606.1| tryptophanyl-tRNA synthetase [Lactobacillus brevis ATCC 367]
          Length = 338

 Score = 40.6 bits (94), Expect = 0.47,   Method: Composition-based stats.
 Identities = 35/238 (14%), Positives = 67/238 (28%), Gaps = 40/238 (16%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
            T   LH GH    +      +         G   + I     +  +      ++I+ ++
Sbjct: 12  PTGK-LHIGHYVGSLKNRVALQN-------TGDYETYIMIADMQALTDNARDPEKIRHSL 63

Query: 104 EKIKGIFSSFIKY-----GTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
                     + Y        K+  L+ +    L  +    L     S  + N  +  E 
Sbjct: 64  ------LQVALDYLAVGIDPAKSTILVQSQIPALNELTMAYLNLVSVSRLNRNPTVKTEI 117

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
            +          F  F Y + QA D      +    + +G  DQ   +    ++      
Sbjct: 118 KQKAFGESVPAGF--FIYPVSQAADITAFKAD---TVPVG-EDQEPMLEQTREIVRSFNN 171

Query: 219 PK-LFALTSP----------LLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNI 264
                 L  P           +    G  KM K+L  AI+L     +     +   ++
Sbjct: 172 IYGQQILVEPEGYFPPKGQGRIPGLDGNAKMSKSLDNAIYLGDSADTIQ---KKIMSM 226


>gi|3849866|emb|CAA10034.1| tryptophanyl tRNA synthetase [Encephalitozoon cuniculi]
          Length = 134

 Score = 40.6 bits (94), Expect = 0.47,   Method: Composition-based stats.
 Identities = 11/53 (20%), Positives = 22/53 (41%), Gaps = 1/53 (1%)

Query: 15  RGFIHQISNPREL-DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           RG +    +   L D + +      Y G   ++ ++H GH    +L  ++Q  
Sbjct: 59  RGIVFAHRDFNLLLDEIANNRPFYLYTGRGPSSKTMHIGHTIPFLLCKYMQDA 111


>gi|91772119|ref|YP_564811.1| 30S ribosomal protein S4 [Methanococcoides burtonii DSM 6242]
 gi|121689437|sp|Q12ZR5|RS4_METBU RecName: Full=30S ribosomal protein S4P
 gi|91711134|gb|ABE51061.1| SSU ribosomal protein S4P [Methanococcoides burtonii DSM 6242]
          Length = 184

 Score = 40.6 bits (94), Expect = 0.47,   Method: Composition-based stats.
 Identities = 21/167 (12%), Positives = 58/167 (34%), Gaps = 13/167 (7%)

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE 297
           GK+             P+   +    +    V  +          E+ +   +  +   +
Sbjct: 5   GKSTKSY----DTPQHPWQAERMASEV--ELVKKYG----LRNKRELWKSLSVLRRFRGD 54

Query: 298 AKKIIAT--EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTL 355
           A++++A   E   + H + EA++     +  F +     ++  +   + E      L T 
Sbjct: 55  ARRLLAESAESDLIGHSKTEADQ-LLTKLIRFSILKSDSNIDDVLGLQTEAILERRLQTQ 113

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNI 402
           + + G A +  +AR+ +    I I+   ++   + +  +   +    
Sbjct: 114 VHRLGLARTARQARQFITHGHIAIDGKRVTVPGMMVTREQEMNVEYY 160


>gi|409696|gb|AAB60257.1| tryptophanyl tRNA synthetase [Oryctolagus cuniculus]
          Length = 149

 Score = 40.6 bits (94), Expect = 0.47,   Method: Composition-based stats.
 Identities = 14/60 (23%), Positives = 25/60 (41%), Gaps = 1/60 (1%)

Query: 15 RGFIHQISN-PRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
          RG      +  + LD   ++     Y G   ++ ++H GHL   +   WLQ     P+ +
Sbjct: 7  RGIFFSHRDMNQVLDAYENKKPFYLYTGRGPSSEAMHVGHLIPFIFTKWLQDVFDVPLVV 66


>gi|78189781|ref|YP_380119.1| 30S ribosomal protein S4 [Chlorobium chlorochromatii CaD3]
 gi|90101681|sp|Q3APJ9|RS4_CHLCH RecName: Full=30S ribosomal protein S4
 gi|78171980|gb|ABB29076.1| SSU ribosomal protein S4P [Chlorobium chlorochromatii CaD3]
          Length = 203

 Score = 40.6 bits (94), Expect = 0.47,   Method: Composition-based stats.
 Identities = 11/55 (20%), Positives = 21/55 (38%), Gaps = 8/55 (14%)

Query: 349 GMGLLTLI--------VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           G  L+ L+         +AGF+ S   AR+ +    + +N   +      +   D
Sbjct: 84  GDNLVKLLERRLDNIVFRAGFSPSRAGARQLVSHGHVTVNGKKVDIPSYLVSPAD 138


>gi|312869508|ref|ZP_07729663.1| S4 domain protein [Lactobacillus oris PB013-T2-3]
 gi|311094955|gb|EFQ53244.1| S4 domain protein [Lactobacillus oris PB013-T2-3]
          Length = 260

 Score = 40.6 bits (94), Expect = 0.48,   Method: Composition-based stats.
 Identities = 16/66 (24%), Positives = 28/66 (42%), Gaps = 10/66 (15%)

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD---STGNIKL----- 404
           L  +V AGF  S N A++ ++   +++N   +     Q+ + D       G I+L     
Sbjct: 185 LDAVVAAGFNYSRNRAKQLVEHGQVRLNWEEVDRPDEQVVVHDLISVRHGGRIRLDEAQG 244

Query: 405 --SFGK 408
               GK
Sbjct: 245 VTRKGK 250


>gi|294495319|ref|YP_003541812.1| RNA-binding S4 domain protein [Methanohalophilus mahii DSM 5219]
 gi|292666318|gb|ADE36167.1| RNA-binding S4 domain protein [Methanohalophilus mahii DSM 5219]
          Length = 218

 Score = 40.6 bits (94), Expect = 0.48,   Method: Composition-based stats.
 Identities = 6/38 (15%), Positives = 21/38 (55%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL 393
           +++ GF +S   A++ +    +K++ ++I+    ++  
Sbjct: 7   LIETGFFSSRGRAKKAISEGHVKVDGNVITKSSREVSE 44


>gi|171741709|ref|ZP_02917516.1| hypothetical protein BIFDEN_00797 [Bifidobacterium dentium ATCC
           27678]
 gi|283454983|ref|YP_003359547.1| tryptophanyl-tRNA synthetase [Bifidobacterium dentium Bd1]
 gi|171277323|gb|EDT44984.1| hypothetical protein BIFDEN_00797 [Bifidobacterium dentium ATCC
           27678]
 gi|283101617|gb|ADB08723.1| tryptophanyl-tRNA synthetase [Bifidobacterium dentium Bd1]
          Length = 367

 Score = 40.6 bits (94), Expect = 0.48,   Method: Composition-based stats.
 Identities = 51/343 (14%), Positives = 106/343 (30%), Gaps = 59/343 (17%)

Query: 22  SNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSI 80
           S+     +  + G  T   G   T   LH GH    +     +Q  G     ++      
Sbjct: 29  SDATLAKLEENPGKFTMLTGDRPTGR-LHLGHYFGSIRERVAMQNRGVNSNIIIADY--- 84

Query: 81  IGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY----GTGKTDALMLNNETWLCSIK 136
                      +++  ++  E+IE    + +  + Y           +  ++     +  
Sbjct: 85  -----------QVITDRDTTEHIE--DNVLNLVLDYMAAGIDPNKTMIFTHSAVPSENQL 131

Query: 137 YIDLLREIGSFFSVNRMLSFESVRSRLK-REQSLSFLEFNYMILQAYDFVELAKNYDCRL 195
            +  L  +             +V+S ++    +L+ L   Y + QA D   L    +   
Sbjct: 132 MLPFLSLVTEAELHRNP----TVKSEMEASGHALTGLLLTYPVHQACD--ILFCKANVV- 184

Query: 196 QMGGSDQWGNIICGIDLGERLKT----------PKLFALT-SPLLTTASGTKMGKTLSGA 244
              G D   ++     +  R                  L+ +P +    G KM K+   +
Sbjct: 185 -PIGKDNLPHVEITRTIARRFNERYAKKHPVFPEPAAILSEAPEIPGLDGRKMSKSYGNS 243

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKII 302
           I L           +   +  D++     +R+T  P++     A L    +      K I
Sbjct: 244 IMLGATAEETTKLIKK--SPTDSE-----RRITFDPIARPQVSALLTTAGLVTGRDPKEI 296

Query: 303 ATEITTMVHGREEAEKAATAAMECF------DMSIHSQHMPTI 339
           A EI     G    ++    ++  F        +  ++ M +I
Sbjct: 297 AEEIGD--SGAGALKQYVIESVNEFLAPHRERRAELAKDMDSI 337


>gi|187251629|ref|YP_001876111.1| tryptophanyl-tRNA synthetase [Elusimicrobium minutum Pei191]
 gi|186971789|gb|ACC98774.1| Tryptophanyl-tRNA synthetase [Elusimicrobium minutum Pei191]
          Length = 373

 Score = 40.6 bits (94), Expect = 0.48,   Method: Composition-based stats.
 Identities = 20/84 (23%), Positives = 32/84 (38%), Gaps = 13/84 (15%)

Query: 176 YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT---PKLFALTSPLLT-- 230
           Y +L A D +     +   +   G DQ  ++    D+  R K      +     PLLT  
Sbjct: 177 YPVLMATDILI----HKASMVPVGQDQVAHLEIARDIVRRFKDIYHSDILVEPKPLLTKV 232

Query: 231 ----TASGTKMGKTLSGAIWLNKE 250
                  G KM K+ +  I L ++
Sbjct: 233 SRVPGLDGRKMSKSYNNTIELGED 256


>gi|109897338|ref|YP_660593.1| 30S ribosomal protein S4 [Pseudoalteromonas atlantica T6c]
 gi|332307746|ref|YP_004435597.1| ribosomal protein S4 [Glaciecola agarilytica 4H-3-7+YE-5]
 gi|122972198|sp|Q15X49|RS4_PSEA6 RecName: Full=30S ribosomal protein S4
 gi|109699619|gb|ABG39539.1| SSU ribosomal protein S4P [Pseudoalteromonas atlantica T6c]
 gi|332175075|gb|AEE24329.1| ribosomal protein S4 [Glaciecola agarilytica 4H-3-7+YE-5]
          Length = 206

 Score = 40.6 bits (94), Expect = 0.48,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 28/63 (44%), Gaps = 8/63 (12%)

Query: 347 SRGMGLLTLIVK--------AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
           + G  LL L+ +         GFA++ +EAR+ +   AI +N  +++     +   D  S
Sbjct: 85  NTGENLLQLLEQRLDNVVYRIGFASTRSEARQLVSHKAILVNGQVVNVPSFNVSADDVVS 144

Query: 399 TGN 401
              
Sbjct: 145 VRE 147


>gi|317486146|ref|ZP_07944990.1| S4 domain-containing protein [Bilophila wadsworthia 3_1_6]
 gi|316922595|gb|EFV43837.1| S4 domain-containing protein [Bilophila wadsworthia 3_1_6]
          Length = 262

 Score = 40.6 bits (94), Expect = 0.48,   Method: Composition-based stats.
 Identities = 7/48 (14%), Positives = 19/48 (39%), Gaps = 1/48 (2%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
            + + +   +  AG   S   A   + +  + +N   +++  LQ+   
Sbjct: 2   EKTVRINKALADAGVC-SRRRADELIAAGRVSVNGEPVASPGLQVTPG 48


>gi|291165693|gb|EFE27741.1| isoleucine--tRNA ligase [Filifactor alocis ATCC 35896]
          Length = 1035

 Score = 40.6 bits (94), Expect = 0.48,   Method: Composition-based stats.
 Identities = 24/125 (19%), Positives = 42/125 (33%), Gaps = 20/125 (16%)

Query: 156 FESVRSRLKREQSLSFLEFNYMILQAYDFVELA-KNYDCRLQMGGSDQ---WGNIICGID 211
            + V         + F + +Y      DF  L   ++ C     G DQ   W   +  I 
Sbjct: 513 KDVVDVWFDSGA-MPFAQHHYPFEHKDDFDGLFPADFICE----GIDQTRGWFYSLLAIS 567

Query: 212 LGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVS 271
                KTP    L + L+    G KM K+    +    +  + ++ +        ADV+ 
Sbjct: 568 TFMTGKTPYKNVLVNDLILDKDGKKMSKSKGNTV----DPFALFDQYG-------ADVLR 616

Query: 272 FAKRL 276
           +    
Sbjct: 617 WYLLY 621


>gi|194468386|ref|ZP_03074372.1| RNA-binding S4 domain protein [Lactobacillus reuteri 100-23]
 gi|194453239|gb|EDX42137.1| RNA-binding S4 domain protein [Lactobacillus reuteri 100-23]
          Length = 261

 Score = 40.6 bits (94), Expect = 0.48,   Method: Composition-based stats.
 Identities = 14/46 (30%), Positives = 24/46 (52%)

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
           L ++V AGF  S N A++ ++   +++N   I     QI + D  S
Sbjct: 186 LDVVVAAGFNYSRNRAKQLIEHGQVRLNWEEIDRPDYQIVVHDLIS 231


>gi|296332563|ref|ZP_06875024.1| tryptophanyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii
           ATCC 6633]
 gi|305673844|ref|YP_003865516.1| tryptophanyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii
           str. W23]
 gi|296150481|gb|EFG91369.1| tryptophanyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii
           ATCC 6633]
 gi|305412088|gb|ADM37207.1| tryptophanyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii
           str. W23]
          Length = 330

 Score = 40.6 bits (94), Expect = 0.48,   Method: Composition-based stats.
 Identities = 54/345 (15%), Positives = 104/345 (30%), Gaps = 64/345 (18%)

Query: 35  VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMM 94
             T + G   +  S+  G+    M  F   +  +     +    + I  P  R + R+ +
Sbjct: 2   KQTIFSGIQPSG-SVTLGNYIGAMKQFVELQHDYNSYFCIVDQHA-ITVPQDRLQLRKNI 59

Query: 95  RSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRML 154
           RS         +    ++          A       W+  ++ +  + E+       RM 
Sbjct: 60  RSLAALYLAVGLDPEKATLFIQSEVPAHAQ----AGWM--MQCVAYIGEL------ERMT 107

Query: 155 SFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
                + + K  +++      Y  L A D +     Y   L   G DQ  ++    +L E
Sbjct: 108 Q---FKDKSKGNEAVVSGLLTYPPLMAADILL----YGTDLVPVGEDQKQHLELTRNLAE 160

Query: 215 RLKTPKLFALTSPLLTTAS-G----------TKMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
           R         T P +     G           KM K+          +  P    +  ++
Sbjct: 161 RFNKKYNDIFTVPEVKIPKVGARIMSLNDPLKKMSKSDPNQKAYITLLDEPKLLEKKIKS 220

Query: 264 -IDDAD------------VVSFAKRLTTLPMSEIDR-MAKLQGKEINEAKKIIATEIT-- 307
            + D++            V +     + L  + I+   AK +GK   E K  +A  +   
Sbjct: 221 AVTDSEGIVKFDKENKPGVSNLLTIYSILGNTTIEELEAKYEGKGYGEFKGDLAEVVVNA 280

Query: 308 -----TMVHG-----------REEAEKAATAAMECFDMSIHSQHM 336
                   H             E AE+A   A +      ++  +
Sbjct: 281 LKPIQDRYHELIESDELDRILDEGAERANRTANKMLKKMENAMGL 325


>gi|119899681|ref|YP_934894.1| 30S ribosomal protein S4 [Azoarcus sp. BH72]
 gi|152060933|sp|A1KB02|RS4_AZOSB RecName: Full=30S ribosomal protein S4
 gi|119672094|emb|CAL96008.1| 30S ribosomal protein S4 [Azoarcus sp. BH72]
          Length = 209

 Score = 40.6 bits (94), Expect = 0.48,   Method: Composition-based stats.
 Identities = 18/75 (24%), Positives = 32/75 (42%), Gaps = 13/75 (17%)

Query: 349 GMGLLTLI--------VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG 400
           G  LL L+         + GF  S  EAR+ ++ N + +N   ++     ++  D     
Sbjct: 90  GENLLQLLEGRLDSVAYRMGFGASRAEARQVVRHNGVLVNGKRVNIPSYTVRPGD----- 144

Query: 401 NIKLSFGKKNHIICH 415
            I+L+ G K H+   
Sbjct: 145 VIELAEGTKGHLRVK 159


>gi|158320966|ref|YP_001513473.1| 30S ribosomal protein S4 [Alkaliphilus oremlandii OhILAs]
 gi|172048008|sp|A8MI45|RS4B_ALKOO RecName: Full=30S ribosomal protein S4 B
 gi|158141165|gb|ABW19477.1| RNA-binding S4 domain protein [Alkaliphilus oremlandii OhILAs]
          Length = 197

 Score = 40.6 bits (94), Expect = 0.48,   Method: Composition-based stats.
 Identities = 11/36 (30%), Positives = 18/36 (50%)

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           GFA+S  EAR+ +    I +N   +      I++ D
Sbjct: 98  GFASSIREARQMVNHGHILVNGKKVDRPSYPIQVDD 133


>gi|86356040|ref|YP_467932.1| tryptophanyl-tRNA synthetase [Rhizobium etli CFN 42]
 gi|86280142|gb|ABC89205.1| tryptophanyl-tRNA synthetase protein [Rhizobium etli CFN 42]
          Length = 354

 Score = 40.6 bits (94), Expect = 0.48,   Method: Composition-based stats.
 Identities = 54/377 (14%), Positives = 116/377 (30%), Gaps = 94/377 (24%)

Query: 31  CSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDES 90
            S+     + G   T + LH G+    +  F   + G+  I  +    +           
Sbjct: 1   MSEFKKLVFSGVQPTGN-LHLGNYLGAIRRFVALQEGNDCIYCVVDMHA----------- 48

Query: 91  RRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFS- 149
              + +Q + E++       ++         +  ++ N++ +     +  +    +    
Sbjct: 49  ---LTAQLVHEDMPSQTRSIAAAFIAAGIDPEKHIVFNQSAVPQHAELAWIFNCVARIGW 105

Query: 150 VNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICG 209
           +NRM  F+    + + + SL    + Y  L A D + + +     +   G DQ  ++   
Sbjct: 106 MNRMTQFKDKAGKDREQASLGL--YAYPSLMAADIL-VYRATHVPV---GEDQKQHLELA 159

Query: 210 IDL-----------GER--------LKTPKLFA---LTSPLLTTA--------SGT-KMG 238
            D+             +        +    + A   +  PL+            GT KM 
Sbjct: 160 RDIAMKFNLDYAEHIRKSGYGIDITVGDEPVHAYFPMVEPLIGGPAPRVMSLRDGTKKMS 219

Query: 239 KTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEA 298
           K+                                    + L    +    +   K+I +A
Sbjct: 220 KSDP----------------------------------SDLSRINLMDDEEAISKKIRKA 245

Query: 299 KKI---IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTL 355
           K     + +E+  +  GR EA+          D S  ++ +      +  V +   L+ L
Sbjct: 246 KTDPDGLPSEVDGL-QGRPEADNLVAIYAALADKS-KAEVLADFGGQQFSVFKPA-LVDL 302

Query: 356 IVKAGFATSTNEARRHL 372
            +    A  T E RR +
Sbjct: 303 AIHV-LAPITGEMRRLM 318


>gi|91205686|ref|YP_538041.1| lysyl-tRNA synthetase [Rickettsia bellii RML369-C]
 gi|123084562|sp|Q1RI62|SYK_RICBR RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|91069230|gb|ABE04952.1| Lysyl-tRNA synthetase [Rickettsia bellii RML369-C]
          Length = 522

 Score = 40.6 bits (94), Expect = 0.49,   Method: Composition-based stats.
 Identities = 15/84 (17%), Positives = 26/84 (30%), Gaps = 6/84 (7%)

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            DF           +M G D   N     ++   L       L   L    +G K+ K+ 
Sbjct: 236 PDFGMRWAALKVDYEMYGKDHLANGRLYSEICRILGEKPPVQLCYELFLDENGEKISKSK 295

Query: 242 SGAIWLNK-EMTSPYN-----FWQ 259
             +I ++     +P        +Q
Sbjct: 296 GNSISVDDWLKYAPVESMALFMYQ 319


>gi|317014644|gb|ADU82080.1| tryptophanyl-tRNA synthetase [Helicobacter pylori Gambia94/24]
          Length = 326

 Score = 40.6 bits (94), Expect = 0.49,   Method: Composition-based stats.
 Identities = 36/188 (19%), Positives = 63/188 (33%), Gaps = 39/188 (20%)

Query: 147 FFSVNRMLSFESVR-SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGN 205
             S+  M      +   LK  +S++   FNY IL A D +     Y   L   G DQ  +
Sbjct: 98  QVSMGEMQRMTQFKDKSLKNPKSVNVGLFNYPILMASDILL----YQSDLVPVGEDQKQH 153

Query: 206 IICGIDLGERLKT--PKLFALTSPLLTTASG---------TKMGKTLSG---AIWLNKEM 251
           +    ++ E+        F +  PL+               KM K+  G   AI+L   +
Sbjct: 154 LELTRNVAEKFNRDFGDCFKVPEPLIAKVGARVMGLDDPKVKMSKSHKGVNHAIFL---L 210

Query: 252 TSPYNFWQYWRNIDDADV---------------VSFAKRLTTLPMSEIDRMAKLQGKEIN 296
             P    +  +      +               ++    L+     +I+   K +G    
Sbjct: 211 DEPDVIVKKIKKAATDSMGVIAFDEKREGIFNLLNIYMLLSDESPEKIEERFKNKG--YG 268

Query: 297 EAKKIIAT 304
           + KK +A 
Sbjct: 269 DFKKELAE 276


>gi|50546385|ref|XP_500662.1| YALI0B08943p [Yarrowia lipolytica]
 gi|49646528|emb|CAG82904.1| YALI0B08943p [Yarrowia lipolytica]
          Length = 438

 Score = 40.6 bits (94), Expect = 0.49,   Method: Composition-based stats.
 Identities = 16/64 (25%), Positives = 26/64 (40%), Gaps = 1/64 (1%)

Query: 11  ILSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
           I  +RG      +  + LD          Y G   ++ S+H GH+T  +   WLQ     
Sbjct: 80  IFLKRGVFFSERDLTKILDRYEQGKPFFLYTGRGPSSDSMHLGHMTPFVFTKWLQDVFDV 139

Query: 70  PISL 73
           P+ +
Sbjct: 140 PLVI 143


>gi|313905835|ref|ZP_07839193.1| tryptophanyl-tRNA synthetase [Eubacterium cellulosolvens 6]
 gi|313469349|gb|EFR64693.1| tryptophanyl-tRNA synthetase [Eubacterium cellulosolvens 6]
          Length = 377

 Score = 40.6 bits (94), Expect = 0.50,   Method: Composition-based stats.
 Identities = 53/313 (16%), Positives = 92/313 (29%), Gaps = 61/313 (19%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGH--KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +     LQ +G   +   L+        D +  D        +   
Sbjct: 17  PTGR-LHLGHYVGSLQRRVQLQNSGKYDEINILIAD------DQALTDNWDNPQ--KIRD 67

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
             IE      S  I     K +  + +N   L ++ +  +        S N  +  E V 
Sbjct: 68  NMIEVALDYLSVGIDPD--KANICVQSNIPALHALTFYYMNLVTTQRLSRNPTVKSEMVM 125

Query: 161 SRL-------KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLG 213
                       +  L    F Y + QA D           +  G  DQ   +    ++ 
Sbjct: 126 RGFSGSEGENDNQAGLPAGFFTYPVSQAADITAFKA---TTVPAG-EDQMPMLEQTREIV 181

Query: 214 ERLKTPKL-FALTSP-----------LLTTASGT-KMGKTLSGAIWLNKE----MTSPYN 256
            +  +      L  P            L    G  KM K+L   I+L+ +     T   +
Sbjct: 182 RKFNSTYQRDILVEPDILLPENESQRRLPGIDGKAKMSKSLGNCIYLSDDPKTVKTKIMS 241

Query: 257 FWQ--YWRNIDD------ADVVSFA----------KRLTTLP-MSEIDRMAKLQGKEINE 297
            +      NIDD        V ++           + L+    + E+    +  G    +
Sbjct: 242 MYTDPEHINIDDPGHVEGNMVFTYLDAFSRQDQFAEYLSDYSCLDEMKEHYRKGGLGDVK 301

Query: 298 AKKIIATEITTMV 310
            KK +   +  M+
Sbjct: 302 CKKFLIKVMEEML 314


>gi|282897968|ref|ZP_06305963.1| RNA-binding S4 [Raphidiopsis brookii D9]
 gi|281197112|gb|EFA72013.1| RNA-binding S4 [Raphidiopsis brookii D9]
          Length = 259

 Score = 40.6 bits (94), Expect = 0.50,   Method: Composition-based stats.
 Identities = 18/71 (25%), Positives = 30/71 (42%), Gaps = 6/71 (8%)

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDST-GNIKLSFG---- 407
           L  I  AGF  S ++    + S  +++N   I+    Q+K+ D  +  G  +L  G    
Sbjct: 186 LDAIASAGFGMSRSKMVDLIDSGDVRVNWKEITQSSYQLKMGDLIAIRGKGRLQVGEIAV 245

Query: 408 -KKNHIICHLC 417
            KK+     L 
Sbjct: 246 TKKDRYRIQLT 256


>gi|228940408|ref|ZP_04102978.1| Tryptophanyl-tRNA synthetase [Bacillus thuringiensis serovar
           berliner ATCC 10792]
 gi|228973324|ref|ZP_04133913.1| Tryptophanyl-tRNA synthetase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228979887|ref|ZP_04140208.1| Tryptophanyl-tRNA synthetase [Bacillus thuringiensis Bt407]
 gi|228779902|gb|EEM28148.1| Tryptophanyl-tRNA synthetase [Bacillus thuringiensis Bt407]
 gi|228786520|gb|EEM34510.1| Tryptophanyl-tRNA synthetase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228819250|gb|EEM65305.1| Tryptophanyl-tRNA synthetase [Bacillus thuringiensis serovar
           berliner ATCC 10792]
          Length = 345

 Score = 40.6 bits (94), Expect = 0.50,   Method: Composition-based stats.
 Identities = 22/98 (22%), Positives = 34/98 (34%), Gaps = 13/98 (13%)

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLF 222
           L+ +  ++   + Y IL A D + L +     +   G DQ  +I    D+          
Sbjct: 136 LEVDAGVNMGLYTYPILMAADIL-LFQATHVPV---GKDQIQHIEIVRDIATYFNHTLGT 191

Query: 223 ALTSP---------LLTTASGTKMGKTLSGAIWLNKEM 251
             T P         +L    G KM K+    I L  E 
Sbjct: 192 TFTLPEYVVQEEGAILPGLDGRKMSKSYGNVIPLFAEK 229


>gi|160947657|ref|ZP_02094824.1| hypothetical protein PEPMIC_01592 [Parvimonas micra ATCC 33270]
 gi|158446791|gb|EDP23786.1| hypothetical protein PEPMIC_01592 [Parvimonas micra ATCC 33270]
          Length = 329

 Score = 40.6 bits (94), Expect = 0.50,   Method: Composition-based stats.
 Identities = 39/170 (22%), Positives = 60/170 (35%), Gaps = 32/170 (18%)

Query: 149 SVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIIC 208
            +NRM  F+      K E++L+   F Y +L A D +     Y   L   G DQ  ++  
Sbjct: 102 QLNRMTQFKE--KSQKSEENLNAGLFTYPVLMAADILL----YQTDLVPVGVDQKQHLEL 155

Query: 209 GIDLGERLKTPKLFALTSPLLTTASGTKMGK--TLSGAIWLNKEMTSPYNFWQYWRNIDD 266
             DL ER      ++ T  +     G + GK  +L                 +   +  D
Sbjct: 156 ARDLAERFNNK--YSDTFVVPEGIIGKETGKIMSLKNP--------------EKKMSKSD 199

Query: 267 ADVVSFAKRLTTLPMSEIDRMAK------LQGKEINEAKKIIATEITTMV 310
            DV SF   L       I R  K      L   + N+ +K +   I   +
Sbjct: 200 EDVNSFILLLDD--EETIKRKIKKSVTDSLGNFDYNDEQKGLKNLINMYI 247


>gi|315635454|ref|ZP_07890720.1| RNA pseudouridine synthase [Arcobacter butzleri JV22]
 gi|315480212|gb|EFU70879.1| RNA pseudouridine synthase [Arcobacter butzleri JV22]
          Length = 275

 Score = 40.6 bits (94), Expect = 0.50,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 24/46 (52%), Gaps = 7/46 (15%)

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
           S  EA + ++   I++NN ++++   ++K  D       K+  GKK
Sbjct: 33  SRREADKLIEEGKIRVNNKVVTDLATKVKSTD-------KVEIGKK 71


>gi|300866710|ref|ZP_07111394.1| hemolysin A [Oscillatoria sp. PCC 6506]
 gi|300335310|emb|CBN56554.1| hemolysin A [Oscillatoria sp. PCC 6506]
          Length = 292

 Score = 40.6 bits (94), Expect = 0.50,   Method: Composition-based stats.
 Identities = 7/39 (17%), Positives = 19/39 (48%)

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL 393
           L+V      S  +A+R +++  + +N  +I     ++ +
Sbjct: 9   LLVNLDLCASRQQAQRLIRAGEVTVNQQVIDKPGTEVDI 47


>gi|296283093|ref|ZP_06861091.1| tryptophanyl-tRNA synthetase [Citromicrobium bathyomarinum JL354]
          Length = 338

 Score = 40.6 bits (94), Expect = 0.50,   Method: Composition-based stats.
 Identities = 39/220 (17%), Positives = 66/220 (30%), Gaps = 41/220 (18%)

Query: 41  GYDLTASSLHAGHLT-QLMLLFWLQK---TGHKPISLMGGGTSIIGDPSFRDESRRMMRS 96
           G   T + LH G+    +     +Q       + +  +    + I       E RR    
Sbjct: 6   GIQPTGN-LHLGNYLGAIRNWVRMQDEMDADSECLFFLADLHA-ISMAHEPAELRRATLE 63

Query: 97  QEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLS- 155
                    I    S           A +     WL        L        +NRM   
Sbjct: 64  MAAALVACGIDPDRSILFNQAQVPQHAEL----QWL--------LNGTARMGWLNRMTQW 111

Query: 156 FESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER 215
            +         +  S   F Y +LQA D + + +     +   G DQ  ++    D+ ++
Sbjct: 112 KDKAGK---NREGASVALFTYPVLQAADVL-VHQATHVPV---GDDQKQHLELARDIAQK 164

Query: 216 L------KTPKLFAL----TSP----LLTTASG-TKMGKT 240
                  +   LF L    T P    +++   G  KM K+
Sbjct: 165 FNNDFCTEDAPLFTLPEPITPPDAARIMSLRDGSKKMSKS 204


>gi|227535269|ref|ZP_03965318.1| ribosomal protein S4 [Lactobacillus paracasei subsp. paracasei ATCC
           25302]
 gi|227187153|gb|EEI67220.1| ribosomal protein S4 [Lactobacillus paracasei subsp. paracasei ATCC
           25302]
          Length = 239

 Score = 40.6 bits (94), Expect = 0.50,   Method: Composition-based stats.
 Identities = 7/48 (14%), Positives = 20/48 (41%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
            L+ + G A+S  +AR+ +    I ++   +     +++     +   
Sbjct: 133 NLVFRLGLASSRPQARQLVNHGHITVDGKRVDIPSYEVEPGQVIALRE 180


>gi|120602463|ref|YP_966863.1| pseudouridine synthase [Desulfovibrio vulgaris DP4]
 gi|120562692|gb|ABM28436.1| ribosomal large subunit pseudouridine synthase B [Desulfovibrio
           vulgaris DP4]
          Length = 292

 Score = 40.6 bits (94), Expect = 0.50,   Method: Composition-based stats.
 Identities = 12/50 (24%), Positives = 21/50 (42%), Gaps = 2/50 (4%)

Query: 337 PTISISKDEVSRG-MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIIS 385
           P    S DEV  G   L   +  AG   S  +A   +    +++N  +++
Sbjct: 32  PQAGTSPDEVEDGGTRLNKALSGAGVC-SRRQADTFIAGGKVRVNGEVVT 80


>gi|29653614|ref|NP_819306.1| 30S ribosomal protein S4 [Coxiella burnetii RSA 493]
 gi|154706831|ref|YP_001425158.1| 30S ribosomal protein S4 [Coxiella burnetii Dugway 5J108-111]
 gi|161831288|ref|YP_001596209.1| 30S ribosomal protein S4 [Coxiella burnetii RSA 331]
 gi|212213226|ref|YP_002304162.1| 30S ribosomal protein S4 [Coxiella burnetii CbuG_Q212]
 gi|41017834|sp|Q83EQ3|RS4_COXBU RecName: Full=30S ribosomal protein S4
 gi|189045376|sp|A9KD07|RS4_COXBN RecName: Full=30S ribosomal protein S4
 gi|189045377|sp|A9NAZ4|RS4_COXBR RecName: Full=30S ribosomal protein S4
 gi|226697830|sp|B6J239|RS4_COXB2 RecName: Full=30S ribosomal protein S4
 gi|29540876|gb|AAO89820.1| SSU ribosomal protein S4P [Coxiella burnetii RSA 493]
 gi|154356117|gb|ABS77579.1| SSU ribosomal protein S4P [Coxiella burnetii Dugway 5J108-111]
 gi|161763155|gb|ABX78797.1| ribosomal protein S4 [Coxiella burnetii RSA 331]
 gi|212011636|gb|ACJ19017.1| SSU ribosomal protein S4P [Coxiella burnetii CbuG_Q212]
          Length = 206

 Score = 40.6 bits (94), Expect = 0.50,   Method: Composition-based stats.
 Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 8/59 (13%)

Query: 347 SRGMGLLTLI--------VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
           S G  LL L+         + GFA +  EAR+ +   AI +N  +++    Q+K  D  
Sbjct: 85  STGDNLLKLLESRLDNVVYRMGFAATRAEARQLISHKAILVNGEVVNIPSYQVKPGDII 143


>gi|325998117|gb|ADZ50325.1| Tryptophanyl-tRNA synthetase [Helicobacter pylori 2017]
          Length = 326

 Score = 40.6 bits (94), Expect = 0.50,   Method: Composition-based stats.
 Identities = 36/188 (19%), Positives = 63/188 (33%), Gaps = 39/188 (20%)

Query: 147 FFSVNRMLSFESVR-SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGN 205
             S+  M      +   LK  +S++   FNY IL A D +     Y   L   G DQ  +
Sbjct: 98  QVSMGEMQRMTQFKDKSLKNPKSVNVGLFNYPILMASDILL----YQSDLVPVGEDQKQH 153

Query: 206 IICGIDLGERLKT--PKLFALTSPLLTTASG---------TKMGKTLSG---AIWLNKEM 251
           +    ++ E+        F +  PL+               KM K+  G   AI+L   +
Sbjct: 154 LELTRNVAEKFNRDFGNCFKVPEPLIAKVGARVMGLDDPKVKMSKSHKGANHAIFL---L 210

Query: 252 TSPYNFWQYWRNIDDADV---------------VSFAKRLTTLPMSEIDRMAKLQGKEIN 296
             P    +  +      +               ++    L+     +I+   K +G    
Sbjct: 211 DEPDVIVKKIKKAATDSMGVIAFDEKREGIFNLLNIYMLLSDESPEKIEERFKNKG--YG 268

Query: 297 EAKKIIAT 304
           + KK +A 
Sbjct: 269 DFKKELAE 276


>gi|196228479|ref|ZP_03127346.1| ribosomal protein S4 [Chthoniobacter flavus Ellin428]
 gi|196227882|gb|EDY22385.1| ribosomal protein S4 [Chthoniobacter flavus Ellin428]
          Length = 203

 Score = 40.6 bits (94), Expect = 0.50,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 20/44 (45%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
            +I + GFA S + AR+ +    +++N   +      +K  D  
Sbjct: 97  NVIYRLGFANSRSAARQLVSHGHVQVNGRKVDVSSFNVKAGDAI 140


>gi|188583517|ref|YP_001926962.1| RNA-binding S4 domain protein [Methylobacterium populi BJ001]
 gi|179347015|gb|ACB82427.1| RNA-binding S4 domain protein [Methylobacterium populi BJ001]
          Length = 577

 Score = 40.6 bits (94), Expect = 0.50,   Method: Composition-based stats.
 Identities = 10/52 (19%), Positives = 24/52 (46%), Gaps = 1/52 (1%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
             G  +   I +AG A S  +A   +++  + +N  I+++  + +   D  +
Sbjct: 23  PEGERIAKAIARAGIA-SRRDAEAMIEAGRVSLNGKILTSPAINVTESDRIA 73


>gi|75676734|ref|YP_319155.1| pseudouridine synthase, Rsu [Nitrobacter winogradskyi Nb-255]
 gi|74421604|gb|ABA05803.1| pseudouridine synthase, Rsu [Nitrobacter winogradskyi Nb-255]
          Length = 680

 Score = 40.6 bits (94), Expect = 0.50,   Method: Composition-based stats.
 Identities = 11/49 (22%), Positives = 23/49 (46%), Gaps = 1/49 (2%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
             G  +  +I +AG A S  +A   +    + +N  +I++  L +  +D
Sbjct: 351 KAGERVAKMISRAGLA-SRRDAEEMVTQGRVAVNGRVINSPALDVTSRD 398


>gi|189426809|ref|YP_001949908.1| hypothetical protein RSL1_gp033 [Ralstonia phage RSL1]
 gi|189233121|dbj|BAG41478.1| hypothetical protein [Ralstonia phage RSL1]
          Length = 57

 Score = 40.6 bits (94), Expect = 0.51,   Method: Composition-based stats.
 Identities = 9/31 (29%), Positives = 18/31 (58%)

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKL 393
            S +E RR ++ ++I +N  ++ + K  I L
Sbjct: 8   ASGSEIRRWIQQSSIVVNGQVVRDPKAVIAL 38


>gi|154500357|ref|ZP_02038395.1| hypothetical protein BACCAP_04024 [Bacteroides capillosus ATCC
           29799]
 gi|150270862|gb|EDM98145.1| hypothetical protein BACCAP_04024 [Bacteroides capillosus ATCC
           29799]
          Length = 359

 Score = 40.6 bits (94), Expect = 0.51,   Method: Composition-based stats.
 Identities = 52/303 (17%), Positives = 103/303 (33%), Gaps = 61/303 (20%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           G   +   LH G+    +   W  +         M    +I    +  D  RR +  +++
Sbjct: 37  GIQPSGD-LHLGNYLGAIK-NWGARADEFDCYYFMADMHTITVRQTPADLRRRTL--EQL 92

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
            + I                K    + ++      + +  +L     F  ++RM  F+  
Sbjct: 93  AQYIACG---------LDPEKNTLFVQSHVHQHAELAW--VLSCYTMFGELSRMTQFKD- 140

Query: 160 RSRLKREQSLSFLEFNYMILQA-------YDFVELAKNYDCRLQMGGS-DQWGNIICGID 211
               K   +++   F Y  L A        DFV + ++    +++  +  Q  N + G  
Sbjct: 141 -KSAKHADNINAGLFTYPCLMAADILLYQPDFVPVGEDQKQHVELTRNIAQRFNHVYGDV 199

Query: 212 LG-----ERLKTPKLFALTSPLLTTASGTKMGKTLS-GAIWLNKEMTSPYNFWQYW-RNI 264
           L            ++ +L  P       TKM K++  G ++L   M  P +  + + R I
Sbjct: 200 LKMPEPYIPKMGARVMSLNQP------DTKMSKSIPEGCVFL---MEKPEDIMRKFKRAI 250

Query: 265 DDAD-----------------VVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
            D+D                 ++S    +T     EI+  A+  GK     K ++   + 
Sbjct: 251 TDSDTEHCVRYDRENKPGVANLMSIYSAVTGKTFEEIE--AEFDGKGYGAFKPVVGEAVV 308

Query: 308 TMV 310
            M+
Sbjct: 309 EML 311


>gi|259500879|ref|ZP_05743781.1| tryptophanyl-tRNA synthetase II [Lactobacillus iners DSM 13335]
 gi|302190668|ref|ZP_07266922.1| tryptophanyl-tRNA synthetase II [Lactobacillus iners AB-1]
 gi|309809142|ref|ZP_07703015.1| tryptophan--tRNA ligase [Lactobacillus iners SPIN 2503V10-D]
 gi|259167573|gb|EEW52068.1| tryptophanyl-tRNA synthetase II [Lactobacillus iners DSM 13335]
 gi|308170587|gb|EFO72607.1| tryptophan--tRNA ligase [Lactobacillus iners SPIN 2503V10-D]
          Length = 339

 Score = 40.6 bits (94), Expect = 0.51,   Method: Composition-based stats.
 Identities = 34/225 (15%), Positives = 73/225 (32%), Gaps = 39/225 (17%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     LQ +G + P  ++    ++       D +R        ++
Sbjct: 11  PTGK-LHIGHYIGSLKNRVKLQNSGEYAPYIMIADTQAL------TDNARNP------EK 57

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNR-MLSFESVR 160
               +  +   ++  G     + +          +      ++ +   + R       ++
Sbjct: 58  IKNSLIQVALDYLAVGLDPEKSTIFVQSQIPALFELTAYFMDLVTVARLQRNPTVKNEIK 117

Query: 161 SR-LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
            +       + FL  NY + QA D       +   +   G DQ   +    ++     + 
Sbjct: 118 QKGFNDSLPIGFL--NYPVSQAADITA----FKASIIPVGDDQEPMLEQTREIVRTFNS- 170

Query: 220 KLFA---LTSPL----------LTTASGT-KMGKTLSGAIWLNKE 250
            ++    L  P           L    G  KM K+L+ AI+L+ +
Sbjct: 171 -VYGKEILVEPKGYFPPKGHGRLPGIDGNAKMSKSLNNAIYLSDD 214


>gi|51473563|ref|YP_067320.1| lysyl-tRNA synthetase [Rickettsia typhi str. Wilmington]
 gi|81826314|sp|Q68X04|SYK_RICTY RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|51459875|gb|AAU03838.1| Lysine translase [Rickettsia typhi str. Wilmington]
          Length = 526

 Score = 40.6 bits (94), Expect = 0.51,   Method: Composition-based stats.
 Identities = 12/68 (17%), Positives = 22/68 (32%)

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            DF       +   +M G D   N      + + L           L    +G K+ K+ 
Sbjct: 236 PDFGMRWAALNVDYEMYGKDHLANSRLYSKICQILGGKPPVQFCYELFLDENGEKISKSR 295

Query: 242 SGAIWLNK 249
             +I ++ 
Sbjct: 296 GNSISVDD 303


>gi|57238843|ref|YP_179979.1| tryptophanyl-tRNA synthetase [Ehrlichia ruminantium str.
           Welgevonden]
 gi|57160922|emb|CAH57827.1| tryptophanyl-tRNA synthetase [Ehrlichia ruminantium str.
           Welgevonden]
          Length = 332

 Score = 40.6 bits (94), Expect = 0.51,   Method: Composition-based stats.
 Identities = 34/213 (15%), Positives = 73/213 (34%), Gaps = 33/213 (15%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   T  S+H G+    +      +  +K    +    ++         S      +  +
Sbjct: 9   GIQPTG-SIHLGNYLGFIRNGVSLQNSYKCFFFLADLHTL--------TSETYNPDELKK 59

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
            +I  +    +  I       ++++ +        + + +   I S   +NRM      +
Sbjct: 60  NSINTLATYLACGID----PENSVLFSQSFIPAHTELLWIFSCITSTGQLNRMTQ---FK 112

Query: 161 SRLKREQSL-SFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
            + + + S  S   ++Y +L A D + L +     +   G DQ  ++    D+ +   T 
Sbjct: 113 EKSRNKVSTASLGLYSYPVLMAADIL-LYQANIVPV---GIDQKQHLELARDIAQAFNTK 168

Query: 220 ---KLFALTSPLLTT--------ASG-TKMGKT 240
              + F L  PL+            G  KM K+
Sbjct: 169 YNTQYFQLPEPLIVQESAKIMSLRDGKKKMSKS 201


>gi|15893934|ref|NP_347283.1| leucyl-tRNA synthetase [Clostridium acetobutylicum ATCC 824]
 gi|32171578|sp|Q97LB6|SYL_CLOAB RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|15023520|gb|AAK78623.1|AE007580_3 Leucyl-tRNA synthetase [Clostridium acetobutylicum ATCC 824]
 gi|325508061|gb|ADZ19697.1| leucyl-tRNA synthetase [Clostridium acetobutylicum EA 2018]
          Length = 812

 Score = 40.6 bits (94), Expect = 0.51,   Method: Composition-based stats.
 Identities = 20/112 (17%), Positives = 38/112 (33%), Gaps = 13/112 (11%)

Query: 228 LLTTASGTKMGKTLSGAIWLNK-------EMTSPYNFWQYWR----NIDDADVVSFAKRL 276
           L+    G KM K+    I  +        ++   Y  + +         D  V + +K +
Sbjct: 564 LILGPDGQKMSKSKGNTISPDDIIAEHGSDVFRMYLMFGFDYAEGGAWSDDGVKAMSKFV 623

Query: 277 TTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFD 328
                  +   AK +      +K  +  E   + + R  + KA T  M+ F 
Sbjct: 624 DRFSR--MIETAKEEINNPKNSKTDMGKEEKELNYVRNHSIKAVTEDMDKFQ 673


>gi|67515551|ref|XP_657661.1| hypothetical protein AN0057.2 [Aspergillus nidulans FGSC A4]
 gi|40746079|gb|EAA65235.1| hypothetical protein AN0057.2 [Aspergillus nidulans FGSC A4]
 gi|259489754|tpe|CBF90286.1| TPA: tyrosyl-tRNA synthetase, putative (Eurofung) [Aspergillus
           nidulans FGSC A4]
          Length = 397

 Score = 40.6 bits (94), Expect = 0.51,   Method: Composition-based stats.
 Identities = 39/228 (17%), Positives = 81/228 (35%), Gaps = 23/228 (10%)

Query: 18  IHQISNPRELDILCSQGV-VTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGG 76
           + +  NP  ++ + ++G     Y G   T    H G+    + +  L   G + + L+  
Sbjct: 16  LAETLNPEIIESILAEGRNPRIYWGTATTGRP-HTGYFVAAIKIAQLLAAGCEVVVLLAD 74

Query: 77  GTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYG--TGKTDALMLNNETWLCS 134
             + +      D  +  +  + ++   +    +  + ++      +    +L +      
Sbjct: 75  IHAFL------DNLKAPL--ELVENRAKYYAKVIRAILESVGVPTEKLEFVLGSSYQKTP 126

Query: 135 IKYIDL--LREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYD 192
              +D+  L  + S     +    E V+        LS L   Y ILQ  D   L     
Sbjct: 127 EYTMDVYKLSSLVSEHDAKKA-GAEIVKQ--SANAPLSGL--LYSILQVLDEEHLK---- 177

Query: 193 CRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
              Q+GG DQ       ++   ++   K   L +P++   SG KM  +
Sbjct: 178 VDAQLGGMDQRKLFAAAVEWLPKIGYRKRAHLVTPMVAGLSGGKMSSS 225


>gi|134045318|ref|YP_001096804.1| 30S ribosomal protein S4P [Methanococcus maripaludis C5]
 gi|172044139|sp|A4FWL4|RS4_METM5 RecName: Full=30S ribosomal protein S4P
 gi|132662943|gb|ABO34589.1| SSU ribosomal protein S4P [Methanococcus maripaludis C5]
          Length = 178

 Score = 40.6 bits (94), Expect = 0.52,   Method: Composition-based stats.
 Identities = 19/164 (11%), Positives = 54/164 (32%), Gaps = 24/164 (14%)

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKI 301
               W+ + + S     Q +  ++  ++     +L                +      + 
Sbjct: 14  PNHPWIGERIQSEKEISQKYGLVNKKELWKMETQL----------------RNYRRQARK 57

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGM---GLLTLIVK 358
           + ++ TT        ++A          +I  +  PT+          +    L T++ +
Sbjct: 58  LISDTTTQ-----GGKEAVQLFNVLKRYAILVESEPTLDHVLSLNIESILERRLQTIVYR 112

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNI 402
            G A +  +AR+ +    I +N   ++     + + + D+   +
Sbjct: 113 KGLAKTAKQARQFIVHGHIAVNGKRVTAPAYLVSVAENDAIEYV 156


>gi|330956269|gb|EGH56529.1| tyrosyl-tRNA synthetase [Pseudomonas syringae Cit 7]
          Length = 53

 Score = 40.6 bits (94), Expect = 0.52,   Method: Composition-based stats.
 Identities = 11/50 (22%), Positives = 17/50 (34%), Gaps = 6/50 (12%)

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           AR  L S  ++I+  ++ +     KL             GKK      L 
Sbjct: 4   ARDLLASGGVRIDGEVV-DRSFVFKL-----GATHVCQAGKKAFGRVTLV 47


>gi|326941040|gb|AEA16936.1| tryptophanyl-tRNA synthetase [Bacillus thuringiensis serovar
           chinensis CT-43]
          Length = 332

 Score = 40.6 bits (94), Expect = 0.52,   Method: Composition-based stats.
 Identities = 22/98 (22%), Positives = 34/98 (34%), Gaps = 13/98 (13%)

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLF 222
           L+ +  ++   + Y IL A D + L +     +   G DQ  +I    D+          
Sbjct: 123 LEVDAGVNMGLYTYPILMAADIL-LFQATHVPV---GKDQIQHIEIVRDIATYFNHTLGT 178

Query: 223 ALTSP---------LLTTASGTKMGKTLSGAIWLNKEM 251
             T P         +L    G KM K+    I L  E 
Sbjct: 179 TFTLPEYVVQEEGAILPGLDGRKMSKSYGNVIPLFAEK 216


>gi|326383231|ref|ZP_08204919.1| 30S ribosomal protein S4 [Gordonia neofelifaecis NRRL B-59395]
 gi|326197981|gb|EGD55167.1| 30S ribosomal protein S4 [Gordonia neofelifaecis NRRL B-59395]
          Length = 201

 Score = 40.6 bits (94), Expect = 0.52,   Method: Composition-based stats.
 Identities = 8/52 (15%), Positives = 20/52 (38%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLS 405
            ++ +AG A +  +AR+ +    + +N   +     ++   D        L 
Sbjct: 95  NVVYRAGLARTRRQARQMVSHGHLTVNGVRVDVPSYRVSQYDIIDVRPKSLQ 146


>gi|157736321|ref|YP_001489004.1| ribosomal large subunit pseudouridine synthase B [Arcobacter
           butzleri RM4018]
 gi|157698175|gb|ABV66335.1| ribosomal large subunit pseudouridine synthase B [Arcobacter
           butzleri RM4018]
          Length = 275

 Score = 40.6 bits (94), Expect = 0.52,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 24/46 (52%), Gaps = 7/46 (15%)

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
           S  EA + ++   I++NN ++++   ++K  D       K+  GKK
Sbjct: 33  SRREADKLIEEGKIRVNNKVVTDLATKVKSTD-------KVEIGKK 71


>gi|262202716|ref|YP_003273924.1| pseudouridine synthase [Gordonia bronchialis DSM 43247]
 gi|262086063|gb|ACY22031.1| pseudouridine synthase [Gordonia bronchialis DSM 43247]
          Length = 329

 Score = 40.6 bits (94), Expect = 0.53,   Method: Composition-based stats.
 Identities = 11/49 (22%), Positives = 25/49 (51%), Gaps = 1/49 (2%)

Query: 346 VSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
           V+ G+ L  ++ +AG   S   A   + +  ++I+  I++ + L+I   
Sbjct: 85  VADGVRLQKVLAQAG-VASRRGAEEMIAAGRVEIDGEIVTEQGLRIDPD 132


>gi|18976613|ref|NP_577970.1| tryptophanyl-tRNA synthetase [Pyrococcus furiosus DSM 3638]
 gi|25009432|sp|Q8U453|SYW_PYRFU RecName: Full=Tryptophanyl-tRNA synthetase; AltName:
           Full=Tryptophan--tRNA ligase; Short=TrpRS
 gi|18892180|gb|AAL80365.1| tryptophanyl-tRNA synthetase [Pyrococcus furiosus DSM 3638]
          Length = 385

 Score = 40.6 bits (94), Expect = 0.53,   Method: Composition-based stats.
 Identities = 43/248 (17%), Positives = 69/248 (27%), Gaps = 29/248 (11%)

Query: 9   LSILSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           L I   R F     +  + LD          Y G   +   +H GH+       WLQ+  
Sbjct: 46  LPIFFRRKFFFSHRDYDKVLDDYEQGKGFFLYTGRGPSGP-MHIGHIIPFFATKWLQEKF 104

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
              + +       I D         +          + I  I +             +  
Sbjct: 105 DVNLYI------QITDDEKFLFKENLTFEDTKYWAYQNILDIIAVGFDPDKT----FIFQ 154

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  +       ++   I     +N  ++          +  +  + F   I  A  F E 
Sbjct: 155 NSEFTK---IYEMAIPIAKK--INFSMAKAVFG--FTEQSKIGMI-FFPAIQAAPTFFEK 206

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGE---RLKTPKLFALTSPLLTTASGTKMGKTLSG- 243
            +   C +     DQ        D  E     KT  L +   P LT   G KM  +    
Sbjct: 207 KR---CLIP-AAIDQDPYWRLQRDFAESLGYYKTAALHSKFFPPLTGLEG-KMSASKPET 261

Query: 244 AIWLNKEM 251
           AI+L    
Sbjct: 262 AIYLTDNP 269


>gi|302388739|ref|YP_003824560.1| SSU ribosomal protein S4P [Thermosediminibacter oceani DSM 16646]
 gi|302199367|gb|ADL06937.1| SSU ribosomal protein S4P [Thermosediminibacter oceani DSM 16646]
          Length = 208

 Score = 40.6 bits (94), Expect = 0.53,   Method: Composition-based stats.
 Identities = 22/127 (17%), Positives = 47/127 (37%), Gaps = 30/127 (23%)

Query: 283 EIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISIS 342
           ++ R     G ++ E +K         ++G  E           F+ +I  + +      
Sbjct: 45  QMKRKLSEYGLQLREKQKA------KRIYGVLE-----RQFKIYFEEAIRRKGV------ 87

Query: 343 KDEVSRGMGLLTLI--------VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
                 G  LL L+         + GFA S  +AR+ ++   I++N   ++    Q++ +
Sbjct: 88  -----TGENLLRLLECRLDNVVYRLGFAKSRAQARQIVRHGHIEVNGRKVTIPSYQVREK 142

Query: 395 DFDSTGN 401
           D  +   
Sbjct: 143 DVIAVRE 149


>gi|110632789|ref|YP_672997.1| pseudouridine synthase, Rsu [Mesorhizobium sp. BNC1]
 gi|110283773|gb|ABG61832.1| Pseudouridine synthase, Rsu [Chelativorans sp. BNC1]
          Length = 466

 Score = 40.6 bits (94), Expect = 0.53,   Method: Composition-based stats.
 Identities = 12/58 (20%), Positives = 28/58 (48%), Gaps = 1/58 (1%)

Query: 340 SISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
            I +D  + G  +   + +AG A S  +A   +++  +K+N  ++S+    ++  D  
Sbjct: 39  EIREDGRTDGERIAKRLARAGLA-SRRDAEAMIEAGRVKVNGRVLSSPAFNVRPSDRI 95


>gi|321314872|ref|YP_004207159.1| tryptophanyl-tRNA synthetase [Bacillus subtilis BSn5]
 gi|320021146|gb|ADV96132.1| tryptophanyl-tRNA synthetase [Bacillus subtilis BSn5]
          Length = 330

 Score = 40.6 bits (94), Expect = 0.53,   Method: Composition-based stats.
 Identities = 46/298 (15%), Positives = 92/298 (30%), Gaps = 46/298 (15%)

Query: 35  VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMM 94
             T + G   +  S+  G+    M  F   +  +     +    + I  P  R E R+  
Sbjct: 2   KQTIFSGIQPSG-SVTLGNYIGAMKQFVELQHDYNSYFCIVDQHA-ITVPQDRLELRK-- 57

Query: 95  RSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRML 154
                      I+ + + ++  G     A +          +   +++ +     + RM 
Sbjct: 58  ----------NIRNLAALYLAVGLDPEKATLFIQSEVPAHAQAGWMMQCVAYIGELERMT 107

Query: 155 SFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
                + + K  +++      Y  L A D +     Y   L   G DQ  ++    +L E
Sbjct: 108 Q---FKDKSKGNEAVVSGLLTYPPLMAADILL----YGTDLVPVGEDQKQHLELTRNLAE 160

Query: 215 RLKTPKLFALTSPLLTTASG-----------TKMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
           R         T P +                 KM K+          +  P    +  ++
Sbjct: 161 RFNKKYNDIFTIPEVKIPKVGARIMSLNDPLKKMSKSDPNQKAYITLLDEPKLLEKKIKS 220

Query: 264 -IDDAD------------VVSFAKRLTTLPMSEIDR-MAKLQGKEINEAKKIIATEIT 307
            + D++            V +     + L  + I+   AK +GK   E K  +A  + 
Sbjct: 221 AVTDSEGIVKFDKENKPGVSNLLTIYSILGNTTIEELEAKYEGKGYGEFKGDLAEVVV 278


>gi|307637925|gb|ADN80375.1| Tryptophanyl-tRNA synthetase [Helicobacter pylori 908]
 gi|325996528|gb|ADZ51933.1| Tryptophanyl-tRNA synthetase [Helicobacter pylori 2018]
          Length = 326

 Score = 40.6 bits (94), Expect = 0.53,   Method: Composition-based stats.
 Identities = 36/188 (19%), Positives = 63/188 (33%), Gaps = 39/188 (20%)

Query: 147 FFSVNRMLSFESVR-SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGN 205
             S+  M      +   LK  +S++   FNY IL A D +     Y   L   G DQ  +
Sbjct: 98  QVSMGEMQRMTQFKDKSLKNPKSVNVGLFNYPILMASDILL----YQSDLVPVGEDQKQH 153

Query: 206 IICGIDLGERLKT--PKLFALTSPLLTTASG---------TKMGKTLSG---AIWLNKEM 251
           +    ++ E+        F +  PL+               KM K+  G   AI+L   +
Sbjct: 154 LELTRNVAEKFNRDFGNCFKVPEPLIAKVGARVMGLDDPKVKMSKSHKGANHAIFL---L 210

Query: 252 TSPYNFWQYWRNIDDADV---------------VSFAKRLTTLPMSEIDRMAKLQGKEIN 296
             P    +  +      +               ++    L+     +I+   K +G    
Sbjct: 211 DEPDVIVKKIKKAATDSMGVIAFDEKREGIFNLLNIYMLLSDESPEKIEERFKNKG--YG 268

Query: 297 EAKKIIAT 304
           + KK +A 
Sbjct: 269 DFKKELAE 276


>gi|297544721|ref|YP_003677023.1| tryptophanyl-tRNA synthetase [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
 gi|296842496|gb|ADH61012.1| tryptophanyl-tRNA synthetase [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
          Length = 327

 Score = 40.6 bits (94), Expect = 0.53,   Method: Composition-based stats.
 Identities = 41/293 (13%), Positives = 95/293 (32%), Gaps = 46/293 (15%)

Query: 37  TAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRS 96
             + G   +   +H G+    M  F   +  ++    +    ++            +   
Sbjct: 3   RVFSGVQPSGD-IHIGNYLGAMRQFVALQEDYECFFCVVDLHAL------TVPQDPIKLK 55

Query: 97  QEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSF 156
           +   E       I          K +  + ++ +    + ++  L+ +  F  ++RM   
Sbjct: 56  ENTIELAGLYLAIG-----LDPKKVNLFVQSHVSAHAELAWL--LQCMTYFGELSRMTQ- 107

Query: 157 ESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL 216
              + + K ++++S   F Y  L A D + L   +   +   G DQ  ++    D+ +R 
Sbjct: 108 --FKEKSKGKETVSVGLFTYPDLMAADIL-LYNTHYVPV---GEDQKQHLELTRDIAQRF 161

Query: 217 KT--PKLFALTSPLLTTASG---------TKMGKTLSGAIWLNKEMTSPYNFWQYWRN-I 264
                + F +  P++               KM K+ S        +  P    +     +
Sbjct: 162 NNRFGETFVVPEPMILKFGARIMSLTDPTKKMSKSDSDPNNRINLLDEPSVIKKKIMRAV 221

Query: 265 DDAD------------VVSFAKRLTTLPMSEIDR-MAKLQGKEINEAKKIIAT 304
            D++            V +     +     EI+  + K +G+     KK +A 
Sbjct: 222 TDSETEIRLDWENKPGVSNLLTIYSLFTGMEIEEVVNKFKGQGYGTLKKELAE 274


>gi|254418210|ref|ZP_05031934.1| conserved hypothetical protein, putative [Brevundimonas sp. BAL3]
 gi|196184387|gb|EDX79363.1| conserved hypothetical protein, putative [Brevundimonas sp. BAL3]
          Length = 259

 Score = 40.6 bits (94), Expect = 0.53,   Method: Composition-based stats.
 Identities = 8/50 (16%), Positives = 19/50 (38%), Gaps = 1/50 (2%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
           +    + +   + + G   S  EA   +    + I+   IS+   +I+  
Sbjct: 8   DGDEPVRVNKWLGQTGVC-SRREAESLIAEGLVSIDGETISDAGRKIEPG 56


>gi|167757119|ref|ZP_02429246.1| hypothetical protein CLORAM_02668 [Clostridium ramosum DSM 1402]
 gi|237735792|ref|ZP_04566273.1| tryptophanyl-tRNA synthetase II [Mollicutes bacterium D7]
 gi|167703294|gb|EDS17873.1| hypothetical protein CLORAM_02668 [Clostridium ramosum DSM 1402]
 gi|229381537|gb|EEO31628.1| tryptophanyl-tRNA synthetase II [Coprobacillus sp. D7]
          Length = 357

 Score = 40.6 bits (94), Expect = 0.53,   Method: Composition-based stats.
 Identities = 41/243 (16%), Positives = 74/243 (30%), Gaps = 49/243 (20%)

Query: 44  LTASSLHAGHLTQLMLLFW---LQKTGH--KPISLMGGGTSIIGDPSFRDESRRMMRSQE 98
            T   LH GH      L     LQ +G   +   ++    ++  +    ++ RR      
Sbjct: 11  PTGR-LHLGHYVG--SLRRRVELQNSGEFDEIFIMIADSQALTDNADNPEKVRR-----N 62

Query: 99  IQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLS--- 155
           I E       +          KT   + +           +      +  +V+R+     
Sbjct: 63  ILEVALDYLSVG-----LDPEKTTMFIQS-----QVPALFEFTAYYMNLVTVSRLQRNPT 112

Query: 156 -FESVRSR-LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQW---------- 203
             E ++ R  +    + FL  NY + QA D       +D      G DQ           
Sbjct: 113 IKEEIKQRGFETSIPVGFL--NYPVSQAADITA----FDATCVPVGEDQMPLIEQTKEIV 166

Query: 204 --GNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYW 261
              N I G  L +         +   L  T    KM K++   I+L     +  +  +  
Sbjct: 167 HSFNRIYGDVLVDPKIMLAENEVCQRLPGTDGKAKMSKSIGNCIYL---ADTSEDVRKKV 223

Query: 262 RNI 264
            ++
Sbjct: 224 MSM 226


>gi|194335471|ref|YP_002017265.1| ribosomal protein S4 [Pelodictyon phaeoclathratiforme BU-1]
 gi|226699099|sp|B4SBX3|RS4_PELPB RecName: Full=30S ribosomal protein S4
 gi|194307948|gb|ACF42648.1| ribosomal protein S4 [Pelodictyon phaeoclathratiforme BU-1]
          Length = 203

 Score = 40.6 bits (94), Expect = 0.53,   Method: Composition-based stats.
 Identities = 12/57 (21%), Positives = 22/57 (38%), Gaps = 8/57 (14%)

Query: 349 GMGLLTLI--------VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
           G  L+ L+         +AGFA S + AR+ +    + IN   +      +   +  
Sbjct: 84  GDNLVKLLERRFDNVVFRAGFAPSRSGARQLVTHGHLLINGKKVDIPSYIVSPSEVI 140


>gi|313836059|gb|EFS73773.1| ribosomal protein S4 [Propionibacterium acnes HL037PA2]
 gi|314929595|gb|EFS93426.1| ribosomal protein S4 [Propionibacterium acnes HL044PA1]
 gi|314970518|gb|EFT14616.1| ribosomal protein S4 [Propionibacterium acnes HL037PA3]
 gi|328906196|gb|EGG25971.1| 30S ribosomal protein S4 [Propionibacterium sp. P08]
          Length = 201

 Score = 40.6 bits (94), Expect = 0.54,   Method: Composition-based stats.
 Identities = 7/48 (14%), Positives = 19/48 (39%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
            ++ +AG A +  +AR+ +      +N   ++    ++   D      
Sbjct: 95  NVVYRAGLAATRRQARQLVSHGHFLVNGKKVNIPSYRVSTHDIIDVRE 142


>gi|288931230|ref|YP_003435290.1| ribosomal protein S4 [Ferroglobus placidus DSM 10642]
 gi|288893478|gb|ADC65015.1| ribosomal protein S4 [Ferroglobus placidus DSM 10642]
          Length = 171

 Score = 40.6 bits (94), Expect = 0.54,   Method: Composition-based stats.
 Identities = 18/120 (15%), Positives = 43/120 (35%), Gaps = 2/120 (1%)

Query: 278 TLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMP 337
                E+ R   +  K    A++++A        G     KA     +   + +  ++  
Sbjct: 35  LRNKRELWRFQAILRKYRRAARELLAKVNLPGREGEIAKAKAQQIIKKLNRIGVLPENAT 94

Query: 338 TISISKDEVSRGM--GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
              I    V   +   L T++ + G A +  +AR+ +    I I    +++    ++  +
Sbjct: 95  LDDILNLTVEDFLERRLQTIVYRMGLANTIKQARQLIVHGHIAIAGRRVTSPSYIVEKDE 154


>gi|227486642|ref|ZP_03916958.1| tryptophan--tRNA ligase [Anaerococcus lactolyticus ATCC 51172]
 gi|227235354|gb|EEI85369.1| tryptophan--tRNA ligase [Anaerococcus lactolyticus ATCC 51172]
          Length = 361

 Score = 40.6 bits (94), Expect = 0.54,   Method: Composition-based stats.
 Identities = 38/225 (16%), Positives = 68/225 (30%), Gaps = 32/225 (14%)

Query: 44  LTASSLHAGHLTQ-LMLLFWLQKTGH--KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    L     +Q  G   K   ++    ++  +     + R     + + 
Sbjct: 11  PTGR-LHLGHYVGSLRNRVKMQNEGKYDKMYVMIADSQALTDNFDNPQKIR-----ENLI 64

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           E       +          K    + +    L  + +   L  +              ++
Sbjct: 65  EVALDYLSVG-----IDPSKVSIFIQSQVAELTELTFY-FLNLVTLSRLERNPTVKSEIK 118

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT-- 218
            R   E SLS     Y + QA D +     +D  +   G DQ   +    +L        
Sbjct: 119 LR-NFETSLSAGFLIYPVSQAADILL----FDANVVPVGEDQEPMLEQARELARSFNNIY 173

Query: 219 PKLFALTSPLLT---------TASGT-KMGKTLSGAIWLNKEMTS 253
            ++F     +L             G  KM K+L  AI+L  +  +
Sbjct: 174 GEVFVEPKAVLPESKMARRMPGIDGAAKMSKSLGNAIYLADDKNT 218


>gi|326403314|ref|YP_004283395.1| lysyl-tRNA synthetase [Acidiphilium multivorum AIU301]
 gi|325050175|dbj|BAJ80513.1| lysyl-tRNA synthetase [Acidiphilium multivorum AIU301]
          Length = 519

 Score = 40.6 bits (94), Expect = 0.54,   Method: Composition-based stats.
 Identities = 19/127 (14%), Positives = 33/127 (25%), Gaps = 11/127 (8%)

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI----WL 247
               +M G D   ++     +   L      + T  L     G K+ K+    +    WL
Sbjct: 243 GVDYEMSGKDLIDSVRLSSAIVRALGGEPPESFTYELFLDEHGQKISKSKGNGLSVEEWL 302

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
                     + +      A      +    +     D     Q   + E K        
Sbjct: 303 TYAPAESLGQFMF------ASPQRAKRLYFDVIPRATDEYLANQD-NLREGKGRAEDNPA 355

Query: 308 TMVHGRE 314
             +HG E
Sbjct: 356 WFIHGGE 362


>gi|227512278|ref|ZP_03942327.1| tryptophanyl-tRNA synthetase II [Lactobacillus buchneri ATCC 11577]
 gi|227084453|gb|EEI19765.1| tryptophanyl-tRNA synthetase II [Lactobacillus buchneri ATCC 11577]
          Length = 338

 Score = 40.6 bits (94), Expect = 0.54,   Method: Composition-based stats.
 Identities = 34/240 (14%), Positives = 77/240 (32%), Gaps = 44/240 (18%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     LQ +G ++   ++    ++  +    ++ R  +    +  
Sbjct: 12  PTGK-LHIGHYVGSLKNRVELQNSGDYETFIMIADMQALTDNARDPEKIRHSLTQVALDY 70

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRM-----LSF 156
               I             +   +++ +          +L +   +  +V+R+     +  
Sbjct: 71  LAVGI-----------DPEKSTILVQS----QIPALPELTQHYSNLVTVSRLNRNPTVKN 115

Query: 157 ESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL 216
           E  +    +   + F    Y I QA D           + +G  DQ   +    ++    
Sbjct: 116 EIKQKNFGQSVPVGFE--MYPISQAADITAFKA---TTVPVG-DDQEPMLEQTREIVRSF 169

Query: 217 KTP-KLFALTSP----------LLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNI 264
            +  K   L  P           +    G  KM K+L  AI+L+ +  +     +   ++
Sbjct: 170 NSIYKADILVEPEGYFPPKGMGRIPGLDGNAKMSKSLGNAIYLSDDEDT---ISKKVMSM 226


>gi|159041669|ref|YP_001540921.1| 30S ribosomal protein S4P [Caldivirga maquilingensis IC-167]
 gi|189045367|sp|A8MDS5|RS4_CALMQ RecName: Full=30S ribosomal protein S4P
 gi|157920504|gb|ABW01931.1| ribosomal protein S4 [Caldivirga maquilingensis IC-167]
          Length = 181

 Score = 40.6 bits (94), Expect = 0.54,   Method: Composition-based stats.
 Identities = 25/92 (27%), Positives = 40/92 (43%), Gaps = 5/92 (5%)

Query: 313 REEAEKAATAAMECFDMSIHSQ-HMPTISISKDEVSRGM--GLLTLIVKAGFATSTNEAR 369
           R EAEK        F M + S  ++P  S+   +V+  +   L TL+ + G A S +EAR
Sbjct: 68  RGEAEKRLK--DRLFRMGLISDINIPLDSVLALDVTAVLERRLQTLVYRKGMARSIHEAR 125

Query: 370 RHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
           + +    I IN   + +    +     D  G 
Sbjct: 126 QLIVHGHISINGVRVRSPGYLVPRNLEDGIGF 157


>gi|220931740|ref|YP_002508648.1| Tryptophanyl-tRNA synthetase [Halothermothrix orenii H 168]
 gi|219993050|gb|ACL69653.1| Tryptophanyl-tRNA synthetase [Halothermothrix orenii H 168]
          Length = 333

 Score = 40.6 bits (94), Expect = 0.54,   Method: Composition-based stats.
 Identities = 40/304 (13%), Positives = 89/304 (29%), Gaps = 43/304 (14%)

Query: 30  LCSQGVVTAYIGYDLTASSLHAGHLTQ-LMLLFWLQKTGHKPISLMGGGTSIIGDPSFRD 88
           +  +       G   T   LH GH    L     LQK  +    ++    ++  +     
Sbjct: 1   MAEKKKKRILTGDRPTGK-LHLGHYVGSLQNRVRLQKE-YDTFLIIADVQALTTNFE--- 55

Query: 89  ESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFF 148
                   +++  ++ ++   + +       +   + + +       +  +L        
Sbjct: 56  ------TPEKLSRDVRQVATDYLAVGI--DPEVTTIFVQSMV----PEIAELTVFYSMIV 103

Query: 149 SVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY-DCRLQMGGSDQWGNII 207
           +VN++    +++S         + +  Y  L           +    L   G DQ  +I 
Sbjct: 104 TVNQLRHNPTIKS---EAAQYGYNDMTYGFLGYPVSQAADITFCKANLVPVGEDQLPHIE 160

Query: 208 CGIDLGERLKT--------PKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFW 258
               +  +           P+      P L    G  KM K+L  AI+L+          
Sbjct: 161 QTRRIVRKFNNLYAPVFPEPEALVSDIPRLVGLDGKSKMSKSLDNAIYLSDSEEEVNRKV 220

Query: 259 QYWRNIDDAD------------VVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           Q                     V  + K   +  ++EI+   +         KK +A  +
Sbjct: 221 QKAVTDPARIRKTDPGHPEVCTVFEYHKAFNSDEVNEIEEKCRAGKIGCVACKKRLAEVL 280

Query: 307 TTMV 310
             ++
Sbjct: 281 NNLL 284


>gi|148259720|ref|YP_001233847.1| lysyl-tRNA synthetase [Acidiphilium cryptum JF-5]
 gi|146401401|gb|ABQ29928.1| lysyl-tRNA synthetase [Acidiphilium cryptum JF-5]
          Length = 519

 Score = 40.6 bits (94), Expect = 0.54,   Method: Composition-based stats.
 Identities = 19/127 (14%), Positives = 33/127 (25%), Gaps = 11/127 (8%)

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI----WL 247
               +M G D   ++     +   L      + T  L     G K+ K+    +    WL
Sbjct: 243 GVDYEMSGKDLIDSVRLSSAIVRALGGEPPESFTYELFLDEHGQKISKSKGNGLSVEEWL 302

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
                     + +      A      +    +     D     Q   + E K        
Sbjct: 303 TYAPAESLGQFMF------ASPQRAKRLYFDVIPRATDEYLANQD-NLREGKGRAEDNPA 355

Query: 308 TMVHGRE 314
             +HG E
Sbjct: 356 WFIHGGE 362


>gi|159044749|ref|YP_001533543.1| lysyl-tRNA synthetase [Dinoroseobacter shibae DFL 12]
 gi|157912509|gb|ABV93942.1| lysyl-tRNA synthetase [Dinoroseobacter shibae DFL 12]
          Length = 552

 Score = 40.6 bits (94), Expect = 0.55,   Method: Composition-based stats.
 Identities = 21/137 (15%), Positives = 45/137 (32%), Gaps = 10/137 (7%)

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            D+           +M G D   ++     +   L      +L+  L    +G K+ K+ 
Sbjct: 237 PDWAMRWAALGVDYEMSGKDLIDSVTQSSKICRALGKRPPESLSYELFNDENGQKISKSK 296

Query: 242 SGAI----WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE 297
              +    WL     +P +  QY+  +              +P +  +   +L+     +
Sbjct: 297 GNGLSMEEWLT--YAAPESL-QYFMYLKPKTAKRLY--FDVIPKAVDEYHQQLRAYPGQD 351

Query: 298 AKKIIATEITTMVHGRE 314
           AK  +       +HG +
Sbjct: 352 AKGQL-NNPVFHIHGAD 367


>gi|15615433|ref|NP_243736.1| tryptophanyl-tRNA synthetase [Bacillus halodurans C-125]
 gi|20139932|sp|Q9K8Y2|SYW_BACHD RecName: Full=Tryptophanyl-tRNA synthetase; AltName:
           Full=Tryptophan--tRNA ligase; Short=TrpRS
 gi|10175491|dbj|BAB06589.1| tryptophanyl-tRNA synthetase [Bacillus halodurans C-125]
          Length = 330

 Score = 40.6 bits (94), Expect = 0.55,   Method: Composition-based stats.
 Identities = 58/350 (16%), Positives = 116/350 (33%), Gaps = 58/350 (16%)

Query: 35  VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMM 94
             T + G   + + L  G+    M  F   +  +     +    + I  P  R + R  +
Sbjct: 2   KKTVFSGIQPSGT-LTLGNYLGAMKHFVSLQEDYNCYFCIVDQHA-ITVPQDRLKLRENI 59

Query: 95  RSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRML 154
           RS         I    ++          A +     W+  ++ +  + E+       RM 
Sbjct: 60  RSLAALYLAVGIDPSKATLFIQSEVPAHAQL----GWM--MQCVSYIGEL------ERMT 107

Query: 155 SFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
                + +   ++++S     Y  L A D +     Y   +   G DQ  ++    DL E
Sbjct: 108 Q---FKDKSDGKEAVSASLLTYPPLMAADILL----YHTNIVPVGEDQKQHLELTRDLAE 160

Query: 215 RLKTPKLFALTSP----------LLTTAS-GTKMGKTLSGA----IWLNKEMTSPYNFWQ 259
           R         T P          +++      KM K+          L+ E T      +
Sbjct: 161 RFNKKYNDIFTIPEVQIPKVGARIMSLNDPSKKMSKSNPNPKSYISMLDDEKT----ITK 216

Query: 260 YWRN-IDDAD-VVSFAK--------RLTTLPM---SEIDRMAKL-QGKEINEAKKIIATE 305
             ++ + D+D +V F K         L+   +   + I+ +     GK   E K+ +A  
Sbjct: 217 KIKSAVTDSDGIVKFDKENKPAISNLLSIYSLCKGASIEEVEAQFVGKGYGEFKESLAQV 276

Query: 306 ITTMVHGREEAEKAATAAMEC---FDMSIHSQH-MPTISISKDEVSRGMG 351
           +   +   +E  +    + E     D      + +   ++ K E + G+G
Sbjct: 277 VVDTLKPIQERYEQLIQSEELDHILDQGADKANRVARKTLEKAERAMGLG 326


>gi|304320847|ref|YP_003854490.1| tryptophanyl-tRNA synthetase [Parvularcula bermudensis HTCC2503]
 gi|303299749|gb|ADM09348.1| tryptophanyl-tRNA synthetase [Parvularcula bermudensis HTCC2503]
          Length = 317

 Score = 40.6 bits (94), Expect = 0.55,   Method: Composition-based stats.
 Identities = 38/211 (18%), Positives = 71/211 (33%), Gaps = 31/211 (14%)

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
               ++ + + ++++  G     A++ N        +   LL  +     +NRM  F+  
Sbjct: 37  AALADQTREVAAAYLAAGIDPEQAVIFNQSAVPEHTELNWLLTCVARMGWLNRMTQFKDK 96

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT- 218
             + K   S+    F Y IL A D + + +     +   G DQ  ++    D+  ++   
Sbjct: 97  AGKDKERASVGL--FVYPILMASDIL-VYRATHVPV---GEDQKQHLELARDIAAKINGD 150

Query: 219 ---PKLFALTSPLLTTA--------SGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDD 266
                 F L  PL+            GT KM K+       +    S         +  D
Sbjct: 151 FDAEHFFPLPEPLIQGPGARIMSLRDGTQKMSKS-------DPSDLSRIGM----MDTPD 199

Query: 267 ADVVSFAKRLTT-LPMSEIDRMAKLQGKEIN 296
             V    K  T   P+ E     + + +  N
Sbjct: 200 ELVRKIKKAKTDPEPLPETVEGLEGRPEAKN 230


>gi|295673552|ref|XP_002797322.1| tryptophanyl-tRNA synthetase [Paracoccidioides brasiliensis Pb01]
 gi|226282694|gb|EEH38260.1| tryptophanyl-tRNA synthetase [Paracoccidioides brasiliensis Pb01]
          Length = 439

 Score = 40.2 bits (93), Expect = 0.55,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 21/61 (34%), Gaps = 1/61 (1%)

Query: 15  RGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +    L+   +      Y G   +  +LH GH        WLQ     P+ +
Sbjct: 75  RGLFFSHRDFDHILNKYEAGEPFFMYTGRGPSTDALHLGHTIPFSFTKWLQDVFDVPLVI 134

Query: 74  M 74
           M
Sbjct: 135 M 135


>gi|159905736|ref|YP_001549398.1| 30S ribosomal protein S4P [Methanococcus maripaludis C6]
 gi|226699087|sp|A9A9Z3|RS4_METM6 RecName: Full=30S ribosomal protein S4P
 gi|159887229|gb|ABX02166.1| ribosomal protein S4 [Methanococcus maripaludis C6]
          Length = 178

 Score = 40.2 bits (93), Expect = 0.55,   Method: Composition-based stats.
 Identities = 18/164 (10%), Positives = 53/164 (32%), Gaps = 24/164 (14%)

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKI 301
               W+ + +       Q +  ++  ++     +L                +      + 
Sbjct: 14  PNHPWIGERIQKEREISQKYGLVNKKELWKMETQL----------------RNYRRQARK 57

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGM---GLLTLIVK 358
           + ++ TT        ++A          +I  +  PT+          +    L T++ +
Sbjct: 58  LISDTTTQ-----GGKEAVQLFNVLKRYAILVEQEPTLDHVLSLDIESILERRLQTIVYR 112

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNI 402
            G A +  +AR+ +    I +N   ++     + + + D+   +
Sbjct: 113 KGLAKTAKQARQFIVHGHIAVNGKRVTAPAYLVSVAENDAIEYV 156


>gi|146422017|ref|XP_001486951.1| hypothetical protein PGUG_00328 [Meyerozyma guilliermondii ATCC
           6260]
 gi|146388072|gb|EDK36230.1| hypothetical protein PGUG_00328 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 465

 Score = 40.2 bits (93), Expect = 0.55,   Method: Composition-based stats.
 Identities = 23/108 (21%), Positives = 42/108 (38%), Gaps = 8/108 (7%)

Query: 299 KKIIATEITTMVHGREEAE-------KAATAAMECFDMSIHSQHMPTISISKDEVSRGMG 351
           +K  A   T   HG    E       K    ++   D S+    +    +     +    
Sbjct: 44  QKWTAKAETRAYHGEHLTEGRWKQLFKPNLESVAQLDASLKGMDVALTPMPLQTYAALEK 103

Query: 352 LLT-LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
            L   + +A FA+S  +AR+++ +  +K+N  II +    +K  D  S
Sbjct: 104 RLEFAMFRAMFASSVRQARQYILNGYVKVNGVIIKHPSFPLKSGDIFS 151


>gi|325848747|ref|ZP_08170257.1| isoleucine--tRNA ligase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
 gi|325480391|gb|EGC83453.1| isoleucine--tRNA ligase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
          Length = 1036

 Score = 40.2 bits (93), Expect = 0.56,   Method: Composition-based stats.
 Identities = 22/111 (19%), Positives = 37/111 (33%), Gaps = 17/111 (15%)

Query: 169 LSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQ---WGNIICGIDLGERLKTPKLFALT 225
           + F + +Y   +  D   L   +       G DQ   W   +  I      K P    L 
Sbjct: 527 MPFSQVHYPFEKGED---LDDYFPADFICEGIDQTRGWFYSLMAISTIITGKAPYKNVLV 583

Query: 226 SPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRL 276
           + L+   +G KM K+    +       +P+  +  +     AD V F    
Sbjct: 584 NDLVVDKNGQKMSKSKGNTL-------NPFELFDKY----GADAVRFYSLY 623


>gi|319948322|ref|ZP_08022468.1| RNA-binding S4 domain protein [Dietzia cinnamea P4]
 gi|319438004|gb|EFV92978.1| RNA-binding S4 domain protein [Dietzia cinnamea P4]
          Length = 99

 Score = 40.2 bits (93), Expect = 0.56,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 20/47 (42%)

Query: 337 PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSI 383
           P +     ++S  + L   +  A    S  EA+  + S A+ +N  +
Sbjct: 21  PPVDDVDCDLSSKLTLGQFLKLASLLDSGAEAKDAVASGAVSVNGEV 67


>gi|304404108|ref|ZP_07385770.1| ribosomal protein S4 [Paenibacillus curdlanolyticus YK9]
 gi|304347086|gb|EFM12918.1| ribosomal protein S4 [Paenibacillus curdlanolyticus YK9]
          Length = 200

 Score = 40.2 bits (93), Expect = 0.56,   Method: Composition-based stats.
 Identities = 14/82 (17%), Positives = 25/82 (30%), Gaps = 3/82 (3%)

Query: 320 ATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKI 379
                  FD +   + +   S           L  L+ + GFA S   AR+ +    + +
Sbjct: 65  EKQFRNLFDRASKQKGI---SGENFMFLLESRLDNLVYRLGFANSRAGARQLVSHGHVTV 121

Query: 380 NNSIISNEKLQIKLQDFDSTGN 401
           N   +      + L D      
Sbjct: 122 NGKKVDIASYTVALGDVIGLRE 143


>gi|282899112|ref|ZP_06307093.1| RNA-binding S4 [Cylindrospermopsis raciborskii CS-505]
 gi|281196028|gb|EFA70944.1| RNA-binding S4 [Cylindrospermopsis raciborskii CS-505]
          Length = 259

 Score = 40.2 bits (93), Expect = 0.56,   Method: Composition-based stats.
 Identities = 18/71 (25%), Positives = 30/71 (42%), Gaps = 6/71 (8%)

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDST-GNIKLSFG---- 407
           L  I  AGF  S ++    + S  +++N   I+    Q+K+ D  +  G  +L  G    
Sbjct: 186 LDAIASAGFGMSRSKMVDLIDSGDVRVNWKEITQSSYQLKMGDLIAIRGKGRLQVGEIAV 245

Query: 408 -KKNHIICHLC 417
            KK+     L 
Sbjct: 246 TKKDRYRIQLT 256


>gi|255658173|ref|ZP_05403582.1| hemolysin A [Mitsuokella multacida DSM 20544]
 gi|260849481|gb|EEX69488.1| hemolysin A [Mitsuokella multacida DSM 20544]
          Length = 268

 Score = 40.2 bits (93), Expect = 0.56,   Method: Composition-based stats.
 Identities = 9/40 (22%), Positives = 19/40 (47%)

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
           L+V+ G A S   A+R + +  + ++   I      +K +
Sbjct: 9   LLVERGLAGSRERAKRMIMAGEVLVDGQKIDKAGTTVKPE 48


>gi|212715172|ref|ZP_03323300.1| hypothetical protein BIFCAT_00061 [Bifidobacterium catenulatum DSM
           16992]
 gi|212661853|gb|EEB22428.1| hypothetical protein BIFCAT_00061 [Bifidobacterium catenulatum DSM
           16992]
          Length = 389

 Score = 40.2 bits (93), Expect = 0.56,   Method: Composition-based stats.
 Identities = 37/256 (14%), Positives = 76/256 (29%), Gaps = 42/256 (16%)

Query: 22  SNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSI 80
           S+     I  + G  T   G   T   LH GH    +     +Q  G     ++      
Sbjct: 51  SDATLAAIEQNPGKFTMLTGDRPTGR-LHLGHYFGSIRERVAMQNRGVNSNIIIADY--- 106

Query: 81  IGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY----GTGKTDALMLNNETWLCSIK 136
                      +++  ++  E+IE    + +  + Y       +   +  ++     +  
Sbjct: 107 -----------QVITDRDTTEHIE--DNVLNLVLDYMAAGIDPEKTMIFTHSAVPAENQL 153

Query: 137 YIDLLREIGSFFSVNRMLSFESVRSRLK-REQSLSFLEFNYMILQAYDFVELAKNYDCRL 195
            +  L  +             +V+S ++    +L+ L   Y + QA D   L    +   
Sbjct: 154 MLPFLSLVTEAELHRNP----TVKSEMEASGHALTGLLLTYPVHQACD--ILFCKANVV- 206

Query: 196 QMGGSDQWGNIICGIDLGERLKT----------PKLFALT-SPLLTTASGTKMGKTLSGA 244
              G D   ++     +  R                  L+ +P +    G KM K+   +
Sbjct: 207 -PIGKDNLPHVEITRTIARRFNERYAKKHPVFPEPAAILSEAPEIPGLDGRKMSKSYGNS 265

Query: 245 IWLNKEMTSPYNFWQY 260
           I L           + 
Sbjct: 266 IMLGATAQETAKLIKK 281


>gi|89070770|ref|ZP_01158028.1| lysyl-tRNA synthetase [Oceanicola granulosus HTCC2516]
 gi|89043669|gb|EAR49875.1| lysyl-tRNA synthetase [Oceanicola granulosus HTCC2516]
          Length = 524

 Score = 40.2 bits (93), Expect = 0.56,   Method: Composition-based stats.
 Identities = 26/164 (15%), Positives = 45/164 (27%), Gaps = 31/164 (18%)

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            DF           +M G D   N      + E L   K    T  L     G K+ K+ 
Sbjct: 236 PDFGARWAALGVDFEMYGKDHSTNTPIYDRICEILGGRKPEHFTYELFLDDKGQKISKSK 295

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKI 301
              + ++                         + LT      +     L+ K        
Sbjct: 296 GNGLSID-------------------------EWLTYASTESLSYYMFLKPKTAKRLHFD 330

Query: 302 IATEITTMVHGR----EEAEKAATAAMECFDMSIHSQHMPTISI 341
           +  +     H +     + + AA  A   F   IH  ++P  ++
Sbjct: 331 VIPKAVDEYHQQLRAYADQDAAARLANPVFH--IHGHNVPASTM 372


>gi|193216644|ref|YP_001999886.1| ribosomal large subunit pseudouridine synthase B [Mycoplasma
           arthritidis 158L3-1]
 gi|193001967|gb|ACF07182.1| ribosomal large subunit pseudouridine synthase B [Mycoplasma
           arthritidis 158L3-1]
          Length = 251

 Score = 40.2 bits (93), Expect = 0.56,   Method: Composition-based stats.
 Identities = 15/79 (18%), Positives = 29/79 (36%), Gaps = 14/79 (17%)

Query: 342 SKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
           +KDE  + + +   I + G+  S  +A   +K   IKIN+ + +  +  +          
Sbjct: 4   TKDEFEKTIKIQKAISQVGYC-SRRQAEELIKQKRIKINHQVATLGQRVLADDQIFID-- 60

Query: 402 IKLSFGKK------NHIIC 414
                GKK         + 
Sbjct: 61  -----GKKLNIKPPKFYLV 74


>gi|91228934|ref|ZP_01262832.1| pseudouridine synthase family 1 protein [Vibrio alginolyticus
           12G01]
 gi|91187517|gb|EAS73851.1| pseudouridine synthase family 1 protein [Vibrio alginolyticus
           12G01]
          Length = 385

 Score = 40.2 bits (93), Expect = 0.56,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 17/47 (36%), Gaps = 1/47 (2%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG 400
             I + GF  S  EA R ++   + IN +        +   D    G
Sbjct: 11  KFISETGFC-SRREADRLIEQGRVTINGNKPEMGTKVLPGDDVCVDG 56


>gi|410137|gb|AAA67493.1| ORFX13 [Bacillus subtilis subsp. subtilis str. 168]
          Length = 229

 Score = 40.2 bits (93), Expect = 0.56,   Method: Composition-based stats.
 Identities = 11/55 (20%), Positives = 25/55 (45%), Gaps = 1/55 (1%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
           L  +I  AG   S ++A   +K   +K+N  +++   +++   D      +K+  
Sbjct: 4   LQKVIAHAG-VASRSKAEELIKEGKVKVNGKVVTELGVKVTGSDQIEVNGLKVER 57


>gi|239947466|ref|ZP_04699219.1| lysyl-tRNA synthetase [Rickettsia endosymbiont of Ixodes
           scapularis]
 gi|239921742|gb|EER21766.1| lysyl-tRNA synthetase [Rickettsia endosymbiont of Ixodes
           scapularis]
          Length = 522

 Score = 40.2 bits (93), Expect = 0.57,   Method: Composition-based stats.
 Identities = 21/135 (15%), Positives = 40/135 (29%), Gaps = 8/135 (5%)

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            DF           +M G D   N     ++   L           L    +G K+ K+ 
Sbjct: 236 PDFGMRWAALKVDYEMYGKDHLANARLYSEICRILGGKPPVQQCYELFLDENGEKISKSK 295

Query: 242 SGAIWLNK-EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK---EINE 297
             +I ++     +P      +      +     +    +    +D       K   E + 
Sbjct: 296 GNSISVDDWLKYAPVESMALFMY---QNPTRAKRLFFDVIPKNVDEYITFNQKYHLEEDR 352

Query: 298 AKKIIATEITTMVHG 312
           AK+  A  +  + HG
Sbjct: 353 AKR-FANPVYHIHHG 366


>gi|116494737|ref|YP_806471.1| ribosomal protein S4 [Lactobacillus casei ATCC 334]
 gi|191638248|ref|YP_001987414.1| 30S ribosomal protein S4 [Lactobacillus casei BL23]
 gi|239631669|ref|ZP_04674700.1| 30S ribosomal protein S4 [Lactobacillus paracasei subsp. paracasei
           8700:2]
 gi|301066295|ref|YP_003788318.1| 30S ribosomal protein L4 [Lactobacillus casei str. Zhang]
 gi|122263845|sp|Q039U3|RS4_LACC3 RecName: Full=30S ribosomal protein S4
 gi|226699078|sp|B3WDV5|RS4_LACCB RecName: Full=30S ribosomal protein S4
 gi|116104887|gb|ABJ70029.1| SSU ribosomal protein S4P [Lactobacillus casei ATCC 334]
 gi|190712550|emb|CAQ66556.1| 30S ribosomal protein S4 [Lactobacillus casei BL23]
 gi|239526134|gb|EEQ65135.1| 30S ribosomal protein S4 [Lactobacillus paracasei subsp. paracasei
           8700:2]
 gi|300438702|gb|ADK18468.1| Ribosomal protein S4 [Lactobacillus casei str. Zhang]
 gi|327382278|gb|AEA53754.1| 30S ribosomal protein S4 [Lactobacillus casei LC2W]
 gi|327385474|gb|AEA56948.1| 30S ribosomal protein S4 [Lactobacillus casei BD-II]
          Length = 203

 Score = 40.2 bits (93), Expect = 0.57,   Method: Composition-based stats.
 Identities = 7/48 (14%), Positives = 20/48 (41%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
            L+ + G A+S  +AR+ +    I ++   +     +++     +   
Sbjct: 97  NLVFRLGLASSRPQARQLVNHGHITVDGKRVDIPSYEVEPGQVIALRE 144


>gi|289579115|ref|YP_003477742.1| ribosomal protein S4 [Thermoanaerobacter italicus Ab9]
 gi|297545302|ref|YP_003677604.1| 30S ribosomal protein S4 [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
 gi|289528828|gb|ADD03180.1| ribosomal protein S4 [Thermoanaerobacter italicus Ab9]
 gi|296843077|gb|ADH61593.1| ribosomal protein S4 [Thermoanaerobacter mathranii subsp. mathranii
           str. A3]
          Length = 206

 Score = 40.2 bits (93), Expect = 0.57,   Method: Composition-based stats.
 Identities = 15/61 (24%), Positives = 24/61 (39%), Gaps = 8/61 (13%)

Query: 349 GMGLLTLI--------VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG 400
           G  LL L+         + GFA S  +AR+ +    I++N   +      +K  D  S  
Sbjct: 89  GENLLQLLERRLDNVVYRLGFAVSRRQARQLVSHGHIEVNGKKVDIPSFLVKPGDVISVR 148

Query: 401 N 401
            
Sbjct: 149 E 149


>gi|150003001|ref|YP_001297745.1| tryptophanyl-tRNA synthetase II [Bacteroides vulgatus ATCC 8482]
 gi|254883649|ref|ZP_05256359.1| tryptophanyl-tRNA synthetase II [Bacteroides sp. 4_3_47FAA]
 gi|294775636|ref|ZP_06741144.1| tryptophan--tRNA ligase [Bacteroides vulgatus PC510]
 gi|319642213|ref|ZP_07996873.1| tryptophanyl-tRNA synthetase [Bacteroides sp. 3_1_40A]
 gi|149931425|gb|ABR38123.1| tryptophanyl-tRNA synthetase [Bacteroides vulgatus ATCC 8482]
 gi|254836442|gb|EET16751.1| tryptophanyl-tRNA synthetase II [Bacteroides sp. 4_3_47FAA]
 gi|294450480|gb|EFG18972.1| tryptophan--tRNA ligase [Bacteroides vulgatus PC510]
 gi|317386199|gb|EFV67118.1| tryptophanyl-tRNA synthetase [Bacteroides sp. 3_1_40A]
          Length = 364

 Score = 40.2 bits (93), Expect = 0.57,   Method: Composition-based stats.
 Identities = 38/223 (17%), Positives = 70/223 (31%), Gaps = 28/223 (12%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN 102
            T   LH GH    +     LQ +G    + +      I D      +  +   +++++N
Sbjct: 13  PTGR-LHIGHYVGSLKRRVELQNSGLYDKTFI-----FIADAQ--ALTDNIENPEKVRQN 64

Query: 103 IEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR 162
           + ++   + +       K+   + +    LC + +  +     S    N  +  E     
Sbjct: 65  VIEVALDYMAVG-LDPMKSTIFIQSQIPELCELTFYYMDLVTVSRLQRNPTVKTEIQMRN 123

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT---- 218
            +    + F  F Y I QA D           + +G  DQ   I    ++  R       
Sbjct: 124 FETSIPVGF--FTYPISQAADITAFKA---TTVPVG-EDQEPMIEQTREIVRRFNHIYGD 177

Query: 219 ---PKLFALTSPL----LTTASGT-KMGKTLSGAIWLNKEMTS 253
                   L        L    G  KM K+L   I+L+     
Sbjct: 178 TLVEPEILLPDNAACLRLPGTDGKAKMSKSLGNCIYLSDTADE 220


>gi|29655328|ref|NP_821020.1| tryptophanyl-tRNA synthetase [Coxiella burnetii RSA 493]
 gi|153206977|ref|ZP_01945795.1| tryptophanyl-tRNA synthetase [Coxiella burnetii 'MSU Goat Q177']
 gi|154707371|ref|YP_001425449.1| tryptophanyl-tRNA synthetase [Coxiella burnetii Dugway 5J108-111]
 gi|161830810|ref|YP_001595932.1| tryptophanyl-tRNA synthetase [Coxiella burnetii RSA 331]
 gi|165918290|ref|ZP_02218376.1| tryptophanyl-tRNA synthetase [Coxiella burnetii RSA 334]
 gi|212219547|ref|YP_002306334.1| tryptophanyl-tRNA synthetase [Coxiella burnetii CbuK_Q154]
 gi|29542600|gb|AAO91534.1| tryptophanyl-tRNA synthetase [Coxiella burnetii RSA 493]
 gi|120577050|gb|EAX33674.1| tryptophanyl-tRNA synthetase [Coxiella burnetii 'MSU Goat Q177']
 gi|154356657|gb|ABS78119.1| tryptophanyl-tRNA synthetase [Coxiella burnetii Dugway 5J108-111]
 gi|161762677|gb|ABX78319.1| tryptophanyl-tRNA synthetase [Coxiella burnetii RSA 331]
 gi|165918150|gb|EDR36754.1| tryptophanyl-tRNA synthetase [Coxiella burnetii RSA 334]
 gi|212013809|gb|ACJ21189.1| tryptophanyl-tRNA synthetase [Coxiella burnetii CbuK_Q154]
          Length = 356

 Score = 40.2 bits (93), Expect = 0.57,   Method: Composition-based stats.
 Identities = 39/255 (15%), Positives = 74/255 (29%), Gaps = 58/255 (22%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGG---GTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +      +  +    L+      T+ +  P+   +S   +    + 
Sbjct: 16  PTGR-LHLGHWVGSVENRVALQEDYDCYFLLANTHAFTTRVDQPAAIRQSTIDITLDYLA 74

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
             I+         + +      A+      +   I +  L+R              + +R
Sbjct: 75  AGIDP-----DKSVIFIESDVPAIFELAAFFSMLIPFPRLMR---------NPTIKDEIR 120

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT-- 218
            + +   + S     Y ILQ  D + +       +   G DQ  ++    ++  R     
Sbjct: 121 DK-ELGDNYSMGFLLYPILQVADILAIRAQ----VVPVGEDQIPHLEMTREVARRFNQMY 175

Query: 219 ------------PKLFALTSPLLTTASGT-----------------KMGKTLSGAIWLNK 249
                       PK   L  P+  T  G                  KM K+L+ AI+L+ 
Sbjct: 176 CGVDSHTEDKDYPKAGGL-FPIPETKVGRVRRLVGTGGPGKNGQLLKMSKSLNNAIFLSD 234

Query: 250 EMTSPYNFWQYWRNI 264
                        N+
Sbjct: 235 PPDRVQE---KIMNM 246


>gi|257068537|ref|YP_003154792.1| putative rRNA methylase [Brachybacterium faecium DSM 4810]
 gi|256559355|gb|ACU85202.1| predicted rRNA methylase [Brachybacterium faecium DSM 4810]
          Length = 281

 Score = 40.2 bits (93), Expect = 0.58,   Method: Composition-based stats.
 Identities = 8/40 (20%), Positives = 17/40 (42%)

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
            ++ AG A S + ARR ++    + +   ++     I   
Sbjct: 9   ALLAAGLARSRSHARRIIEEGRARADGRAVTKPSTPIPPG 48


>gi|208435147|ref|YP_002266813.1| tryptophanyl-tRNA synthetase [Helicobacter pylori G27]
 gi|208433076|gb|ACI27947.1| tryptophanyl-tRNA synthetase [Helicobacter pylori G27]
          Length = 326

 Score = 40.2 bits (93), Expect = 0.58,   Method: Composition-based stats.
 Identities = 37/185 (20%), Positives = 61/185 (32%), Gaps = 33/185 (17%)

Query: 147 FFSVNRMLSFESVR-SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGN 205
             S+  M      +   LK  +S++   FNY IL A D +     Y   L   G DQ  +
Sbjct: 98  QVSMGEMQRMTQFKDKSLKNPKSVNVGLFNYPILMASDILL----YQSDLVPVGEDQKQH 153

Query: 206 IICGIDLGERLKT--PKLFALTSPLLTTASG---------TKMGKTLSG---AIWLNKEM 251
           +    ++ E+        F +  PL+               KM K+  G   AI+L  E 
Sbjct: 154 LELTRNIAEKFNKDFGNCFKVPEPLIAKVGARVMGLDDPKVKMSKSHKGANHAIFLLDEP 213

Query: 252 TSPYNFWQYWRNID------DAD------VVSFAKRLTTLPMSEIDRMAKLQGKEINEAK 299
                  +            D        +++    L+      I+   K +G    + K
Sbjct: 214 DIIVKKIKKAATDSIGVIAFDEKREGIFNLLNIYMLLSDESPENIEERFKNKG--YGDFK 271

Query: 300 KIIAT 304
           K +A 
Sbjct: 272 KELAE 276


>gi|119469122|ref|ZP_01612106.1| 16S rRNA pseudouridylate 516 synthase [Alteromonadales bacterium
           TW-7]
 gi|119447374|gb|EAW28642.1| 16S rRNA pseudouridylate 516 synthase [Alteromonadales bacterium
           TW-7]
          Length = 232

 Score = 40.2 bits (93), Expect = 0.58,   Method: Composition-based stats.
 Identities = 11/55 (20%), Positives = 22/55 (40%), Gaps = 1/55 (1%)

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQD-FDSTGNIKLSFGKKNHIICHLCG 418
             +AR  +K   + +N  +I+    Q+   D     G   +  GK+  ++    G
Sbjct: 19  RTQARASIKRKEVSVNGEVITAHNFQLAKDDVVLHNGEPLVFLGKRYFMLNKPVG 73


>gi|254230555|ref|ZP_04923923.1| conserved hypothetical protein, putative [Vibrio sp. Ex25]
 gi|262394965|ref|YP_003286819.1| ribosomal large subunit pseudouridine synthase F [Vibrio sp. Ex25]
 gi|151936927|gb|EDN55817.1| conserved hypothetical protein, putative [Vibrio sp. Ex25]
 gi|262338559|gb|ACY52354.1| ribosomal large subunit pseudouridine synthase F [Vibrio sp. Ex25]
          Length = 385

 Score = 40.2 bits (93), Expect = 0.58,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 17/47 (36%), Gaps = 1/47 (2%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG 400
             I + GF  S  EA R ++   + IN +        +   D    G
Sbjct: 11  KFISETGFC-SRREADRLIEQGRVTINGNKPEMGTKVLPGDDVCVDG 56


>gi|312622474|ref|YP_004024087.1| hemolysin a [Caldicellulosiruptor kronotskyensis 2002]
 gi|312202941|gb|ADQ46268.1| hemolysin A [Caldicellulosiruptor kronotskyensis 2002]
          Length = 269

 Score = 40.2 bits (93), Expect = 0.58,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 17/39 (43%)

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL 393
           L+V+ G   S  +AR  + S  + +NN  I      I  
Sbjct: 8   LLVEKGLVESREKARALILSGNVYVNNQKIEKAGEMIDE 46


>gi|224436535|ref|ZP_03657544.1| hypothetical protein HcinC1_01225 [Helicobacter cinaedi CCUG 18818]
          Length = 240

 Score = 40.2 bits (93), Expect = 0.58,   Method: Composition-based stats.
 Identities = 11/56 (19%), Positives = 28/56 (50%), Gaps = 3/56 (5%)

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF--DSTGNIKLSF 406
           L + VK+   +S  +A+  ++S  +K+N +++      ++  D     + ++ LS 
Sbjct: 3   LDIYVKS-LCSSRTKAKEAIESGCVKVNGAVVKKGSFLLEKDDEVGVDSKDLLLSR 57


>gi|222529280|ref|YP_002573162.1| hemolysin A [Caldicellulosiruptor bescii DSM 6725]
 gi|222456127|gb|ACM60389.1| hemolysin A [Caldicellulosiruptor bescii DSM 6725]
          Length = 269

 Score = 40.2 bits (93), Expect = 0.58,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 17/39 (43%)

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL 393
           L+V+ G   S  +AR  + S  + +NN  I      I  
Sbjct: 8   LLVEKGLVESREKARALILSGNVYVNNQKIEKAGEMIDE 46


>gi|212213500|ref|YP_002304436.1| tryptophanyl-tRNA synthetase [Coxiella burnetii CbuG_Q212]
 gi|212011910|gb|ACJ19291.1| tryptophanyl-tRNA synthetase [Coxiella burnetii CbuG_Q212]
          Length = 356

 Score = 40.2 bits (93), Expect = 0.58,   Method: Composition-based stats.
 Identities = 39/255 (15%), Positives = 74/255 (29%), Gaps = 58/255 (22%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGG---GTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +      +  +    L+      T+ +  P+   +S   +    + 
Sbjct: 16  PTGR-LHLGHWVGSVENRVALQEDYDCYFLLANTHAFTTRVDQPAAIRQSTIDITLDYLA 74

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
             I+         + +      A+      +   I +  L+R              + +R
Sbjct: 75  AGIDP-----DKSVIFIESDVPAIFELAAFFSMLIPFPRLMR---------NPTIKDEIR 120

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT-- 218
            + +   + S     Y ILQ  D + +       +   G DQ  ++    ++  R     
Sbjct: 121 DK-ELGDNYSMGFLLYPILQVADILAIRAQ----VVPVGEDQIPHLEMTREVARRFNQMY 175

Query: 219 ------------PKLFALTSPLLTTASGT-----------------KMGKTLSGAIWLNK 249
                       PK   L  P+  T  G                  KM K+L+ AI+L+ 
Sbjct: 176 CGVDSHTEDKDYPKAGGL-FPIPETKVGRVRRLIGTGGPGKNGQLLKMSKSLNNAIFLSD 234

Query: 250 EMTSPYNFWQYWRNI 264
                        N+
Sbjct: 235 PPDRVQE---KIMNM 246


>gi|121716198|ref|XP_001275708.1| tyrosyl-tRNA synthetase [Aspergillus clavatus NRRL 1]
 gi|119403865|gb|EAW14282.1| tyrosyl-tRNA synthetase [Aspergillus clavatus NRRL 1]
          Length = 353

 Score = 40.2 bits (93), Expect = 0.58,   Method: Composition-based stats.
 Identities = 43/266 (16%), Positives = 83/266 (31%), Gaps = 40/266 (15%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASS--LHAGHLTQLMLLFWLQKTGH 68
            L  +G    +     +  L  +G      G+  TA +   H  +   L+ L    K G 
Sbjct: 12  ELITKGLTE-VHGEDSIRQLLEEGRNPK--GFWATAPTGKPHLAYFVPLLKLADFVKAGA 68

Query: 69  KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK-YGTGKTDALMLN 127
                      ++               + +       K I  + ++  G  +     + 
Sbjct: 69  DVNL----YAFLVNYKH---------SWETVGHRTAYYKHIVGAVLRTIGVPENTVHFVE 115

Query: 128 NETWLCSIKYIDLLREIG-SFFSVNRMLSFESVRSR---LKREQSLSFLEFNYMILQAYD 183
             +        +L +E   + + ++ +     V++     +    LS       +L    
Sbjct: 116 GSS-------YELSKEFSLANYKLSVLTDVTDVKATGDEYRNPGKLS-------VLFCPG 161

Query: 184 FVELAKNY-DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
              LA+ Y DC  Q GG DQ G           L   K   L +P++    GTKM  ++ 
Sbjct: 162 LPALAEEYLDCDFQFGGEDQRGLFAFNERFLPELGYRKRAHLMNPMVPGLQGTKMSSSVP 221

Query: 243 GAIWLNKEMTSPYNFWQYWRNIDDAD 268
            +    + +  P +  +   N    D
Sbjct: 222 DS--KIEFLEDPESVRRKIFNARCED 245


>gi|151945537|gb|EDN63778.1| tryptophanyl-tRNA synthetase [Saccharomyces cerevisiae YJM789]
          Length = 432

 Score = 40.2 bits (93), Expect = 0.59,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 21/47 (44%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           LD+         Y G   ++ S+H GH+   +   WLQ+    P+ +
Sbjct: 94  LDLYEQGKPFFLYTGRGPSSDSMHLGHMIPFVFTKWLQEVFDVPLVI 140


>gi|311113298|ref|YP_003984520.1| pseudouridine synthase [Rothia dentocariosa ATCC 17931]
 gi|310944792|gb|ADP41086.1| pseudouridine synthase [Rothia dentocariosa ATCC 17931]
          Length = 357

 Score = 40.2 bits (93), Expect = 0.59,   Method: Composition-based stats.
 Identities = 8/50 (16%), Positives = 20/50 (40%), Gaps = 1/50 (2%)

Query: 348 RGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
            G+ L  L+ +AG   S       +    + +N  +++   +++   D  
Sbjct: 117 EGVRLQKLMAQAG-VASRRVCEEMITEGRVTVNGEVVTELGVRVNPADVI 165


>gi|288965772|pdb|3KT0|A Chain A, Crystal Structure Of S. Cerevisiae Tryptophanyl-Trna
           Synthet
 gi|288965774|pdb|3KT3|A Chain A, Crystal Structure Of S. Cerevisiae Tryptophanyl-Trna
           Synthet Complex With Trpamp
 gi|288965775|pdb|3KT3|B Chain B, Crystal Structure Of S. Cerevisiae Tryptophanyl-Trna
           Synthet Complex With Trpamp
 gi|288965776|pdb|3KT3|C Chain C, Crystal Structure Of S. Cerevisiae Tryptophanyl-Trna
           Synthet Complex With Trpamp
 gi|288965777|pdb|3KT3|D Chain D, Crystal Structure Of S. Cerevisiae Tryptophanyl-Trna
           Synthet Complex With Trpamp
 gi|288965779|pdb|3KT6|A Chain A, Crystal Structure Of S. Cerevisiae Tryptophanyl-Trna
           Synthet Complex With Trp
 gi|288965780|pdb|3KT6|B Chain B, Crystal Structure Of S. Cerevisiae Tryptophanyl-Trna
           Synthet Complex With Trp
 gi|288965781|pdb|3KT6|C Chain C, Crystal Structure Of S. Cerevisiae Tryptophanyl-Trna
           Synthet Complex With Trp
 gi|288965782|pdb|3KT6|D Chain D, Crystal Structure Of S. Cerevisiae Tryptophanyl-Trna
           Synthet Complex With Trp
 gi|288965783|pdb|3KT8|A Chain A, Crystal Structure Of S. Cerevisiae Tryptophanyl-Trna
           Synthet Complex With L-Tryptophanamide
 gi|288965784|pdb|3KT8|B Chain B, Crystal Structure Of S. Cerevisiae Tryptophanyl-Trna
           Synthet Complex With L-Tryptophanamide
 gi|288965785|pdb|3KT8|C Chain C, Crystal Structure Of S. Cerevisiae Tryptophanyl-Trna
           Synthet Complex With L-Tryptophanamide
 gi|288965786|pdb|3KT8|D Chain D, Crystal Structure Of S. Cerevisiae Tryptophanyl-Trna
           Synthet Complex With L-Tryptophanamide
          Length = 438

 Score = 40.2 bits (93), Expect = 0.59,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 21/47 (44%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           LD+         Y G   ++ S+H GH+   +   WLQ+    P+ +
Sbjct: 94  LDLYEQGKPFFLYTGRGPSSDSMHLGHMIPFVFTKWLQEVFDVPLVI 140


>gi|256271420|gb|EEU06481.1| Wrs1p [Saccharomyces cerevisiae JAY291]
          Length = 432

 Score = 40.2 bits (93), Expect = 0.59,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 21/47 (44%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           LD+         Y G   ++ S+H GH+   +   WLQ+    P+ +
Sbjct: 94  LDLYEQGKPFFLYTGRGPSSDSMHLGHMIPFVFTKWLQEVFDVPLVI 140


>gi|256370719|ref|YP_003108544.1| tryptophanyl-tRNA synthetase [Candidatus Sulcia muelleri SMDSEM]
 gi|256009511|gb|ACU52871.1| tryptophanyl-tRNA synthetase [Candidatus Sulcia muelleri SMDSEM]
          Length = 324

 Score = 40.2 bits (93), Expect = 0.59,   Method: Composition-based stats.
 Identities = 35/207 (16%), Positives = 66/207 (31%), Gaps = 35/207 (16%)

Query: 50  HAGHLTQLM--LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIK 107
           H G+L  +M   +   + +  +   L+    S     S ++        +     +    
Sbjct: 15  HIGNLLGVMLPTIKNSKTSLKEVFILIADFHSFTNIKSIKNIKNN--TYKIAAAWLACGL 72

Query: 108 GIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ 167
            +  + +   +       L    W            +  FF   R+    S +S+     
Sbjct: 73  KLDKAILYRQSDIPQITELF---WF-----------LNCFFPYQRLKLSHSFKSKNNINT 118

Query: 168 SLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFAL- 224
            L    F Y IL A D +     +D ++   G DQ  +I     + +++      LF + 
Sbjct: 119 GL----FTYPILMAADILL----FDSKIVFVGKDQLQHIEITRKIAKKINNKIKNLFLIP 170

Query: 225 ------TSPLLTTASGTKMGKTLSGAI 245
                 TS  +    G KM K+    I
Sbjct: 171 EAKIKKTSMAIPGIDGYKMSKSRKNTI 197


>gi|190407252|gb|EDV10519.1| tryptophanyl-tRNA synthetase [Saccharomyces cerevisiae RM11-1a]
 gi|207341437|gb|EDZ69497.1| YOL097Cp-like protein [Saccharomyces cerevisiae AWRI1631]
          Length = 432

 Score = 40.2 bits (93), Expect = 0.59,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 21/47 (44%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           LD+         Y G   ++ S+H GH+   +   WLQ+    P+ +
Sbjct: 94  LDLYEQGKPFFLYTGRGPSSDSMHLGHMIPFVFTKWLQEVFDVPLVI 140


>gi|167380825|ref|XP_001733296.1| tryptophanyl-tRNA synthetase [Entamoeba dispar SAW760]
 gi|165902531|gb|EDR28330.1| tryptophanyl-tRNA synthetase, putative [Entamoeba dispar SAW760]
          Length = 359

 Score = 40.2 bits (93), Expect = 0.59,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 21/53 (39%), Gaps = 1/53 (1%)

Query: 15  RGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT 66
           RG      +    LD +     +  Y G   ++ +LH GHL   +   +LQ  
Sbjct: 55  RGLFFCHRDINPILDDVEKGNKIYLYTGRGPSSDALHLGHLIPFIFTKYLQDA 107


>gi|6324475|ref|NP_014544.1| Wrs1p [Saccharomyces cerevisiae S288c]
 gi|2501074|sp|Q12109|SYWC_YEAST RecName: Full=Tryptophanyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Tryptophan--tRNA ligase; Short=TrpRS
 gi|151567662|pdb|2IP1|A Chain A, Crystal Structure Analysis Of S. Cerevisiae Tryptophanyl
           Trna Synthetase
 gi|663256|emb|CAA88164.1| orf [Saccharomyces cerevisiae]
 gi|1419948|emb|CAA99110.1| WRS1 [Saccharomyces cerevisiae]
 gi|259149389|emb|CAY86193.1| Wrs1p [Saccharomyces cerevisiae EC1118]
 gi|285814794|tpg|DAA10687.1| TPA: Wrs1p [Saccharomyces cerevisiae S288c]
 gi|323303127|gb|EGA56929.1| Wrs1p [Saccharomyces cerevisiae FostersB]
 gi|323307060|gb|EGA60343.1| Wrs1p [Saccharomyces cerevisiae FostersO]
 gi|323335627|gb|EGA76910.1| Wrs1p [Saccharomyces cerevisiae Vin13]
 gi|323346693|gb|EGA80977.1| Wrs1p [Saccharomyces cerevisiae Lalvin QA23]
 gi|323352308|gb|EGA84843.1| Wrs1p [Saccharomyces cerevisiae VL3]
          Length = 432

 Score = 40.2 bits (93), Expect = 0.59,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 21/47 (44%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           LD+         Y G   ++ S+H GH+   +   WLQ+    P+ +
Sbjct: 94  LDLYEQGKPFFLYTGRGPSSDSMHLGHMIPFVFTKWLQEVFDVPLVI 140


>gi|218195429|gb|EEC77856.1| hypothetical protein OsI_17112 [Oryza sativa Indica Group]
          Length = 879

 Score = 40.2 bits (93), Expect = 0.60,   Method: Composition-based stats.
 Identities = 19/91 (20%), Positives = 29/91 (31%), Gaps = 13/91 (14%)

Query: 166 EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALT 225
           +  ++   F Y +L A D +   K +   +   G DQ  +I    D+             
Sbjct: 222 DDGVTAGLFMYPVLMAADILA-FKAHKVPV---GRDQVQHIEMARDIASSFNHLYGEHFV 277

Query: 226 SP---------LLTTASGTKMGKTLSGAIWL 247
            P          L    G KM K+    I L
Sbjct: 278 LPEAAVDEHVATLPGLDGRKMSKSYDNTIPL 308


>gi|149922188|ref|ZP_01910626.1| SSU ribosomal protein S4P [Plesiocystis pacifica SIR-1]
 gi|149816928|gb|EDM76413.1| SSU ribosomal protein S4P [Plesiocystis pacifica SIR-1]
          Length = 202

 Score = 40.2 bits (93), Expect = 0.60,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 27/65 (41%), Gaps = 13/65 (20%)

Query: 349 GMGLLTLI--------VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG 400
           G  LL+L+        V+ GFA S  EAR+ ++     IN   ++    Q++        
Sbjct: 83  GENLLSLLERRLDNVAVRCGFAASHAEARQLVRHGHFTINGKKVNIPSYQVRE-----GE 137

Query: 401 NIKLS 405
            I + 
Sbjct: 138 EIVVR 142


>gi|146304925|ref|YP_001192241.1| tryptophanyl-tRNA synthetase [Metallosphaera sedula DSM 5348]
 gi|145703175|gb|ABP96317.1| tryptophanyl-tRNA synthetase [Metallosphaera sedula DSM 5348]
          Length = 381

 Score = 40.2 bits (93), Expect = 0.60,   Method: Composition-based stats.
 Identities = 43/246 (17%), Positives = 81/246 (32%), Gaps = 40/246 (16%)

Query: 27  LDILCSQGVVTAYIGYDLTASSL--HAGHLTQLMLLFWL-QKTGHKPISLMGGGTSIIGD 83
           L    +      Y G    A SL  H GH+   +   WL QK G      +        D
Sbjct: 65  LKDWKAGKGFFLYTG---RAPSLGMHIGHMIPFIFTAWLQQKFGVNVYIEITD------D 115

Query: 84  PSFRDESRRM-MRSQEIQENI-EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLL 141
             F    R +     + ++   + I  I ++            +  +  ++ ++  +   
Sbjct: 116 EKF---MRNLDYTLDQTRQWALDNILDIIAAGFDPDKT----FIFQDTEYIRNMYPL--- 165

Query: 142 REIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSD 201
                   + + L+F  V++    + S +     Y  LQ      + +   C +  G  D
Sbjct: 166 -----AIKIAKKLTFSEVKATFGLDVSSNIGIIFYPSLQ--IVPTMFEKRRCLIPAG-ID 217

Query: 202 QWGNIICGIDLGE---RLKTPKLFALTSPLLTTASGTKMGKTLS-GAIWLNKEMTSPYNF 257
           Q        D+ E     K  ++ +   P LT   G KM  ++   AI+L+ +   P   
Sbjct: 218 QDPYWRLQRDIAESLGYYKAAQIHSKFLPPLTGPEG-KMSSSIPESAIYLSDD---PKTV 273

Query: 258 WQYWRN 263
            +    
Sbjct: 274 ERKIMK 279


>gi|51013347|gb|AAT92967.1| YOL097C [Saccharomyces cerevisiae]
          Length = 432

 Score = 40.2 bits (93), Expect = 0.60,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 21/47 (44%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           LD+         Y G   ++ S+H GH+   +   WLQ+    P+ +
Sbjct: 94  LDLYEQGKPFFLYTGRGPSSDSMHLGHMIPFVFTKWLQEVFDVPLVI 140


>gi|330501895|ref|YP_004378764.1| tryptophanyl-tRNA synthetase [Pseudomonas mendocina NK-01]
 gi|328916181|gb|AEB57012.1| tryptophanyl-tRNA synthetase [Pseudomonas mendocina NK-01]
          Length = 448

 Score = 40.2 bits (93), Expect = 0.60,   Method: Composition-based stats.
 Identities = 21/94 (22%), Positives = 35/94 (37%), Gaps = 16/94 (17%)

Query: 166 EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-----TPK 220
           +  ++   F+Y +L A D +        ++ +G  DQ  ++    D+G+R          
Sbjct: 126 DAGVTMGLFSYPVLMAADILMFNAQ---KVPVG-RDQIQHVEMARDIGQRFNHLFGKGKD 181

Query: 221 LFAL-------TSPLLTTASGTKMGKTLSGAIWL 247
           LF L           L    G KM K+    I L
Sbjct: 182 LFVLPEVVIEEEVATLPGLDGRKMSKSYDNTIPL 215


>gi|261403747|ref|YP_003247971.1| ribosomal protein S4 [Methanocaldococcus vulcanius M7]
 gi|261370740|gb|ACX73489.1| ribosomal protein S4 [Methanocaldococcus vulcanius M7]
          Length = 186

 Score = 40.2 bits (93), Expect = 0.60,   Method: Composition-based stats.
 Identities = 20/126 (15%), Positives = 49/126 (38%), Gaps = 9/126 (7%)

Query: 281 MSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS 340
             E+ +   +  K   +A+++I+          + A++A           I     PT+ 
Sbjct: 39  KREVWKAETILRKYRRQARRLISDRT------EQGAKEAVQLFNVLRKYGILKIEDPTLD 92

Query: 341 ISKDEVSRGM---GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
                    +    L TL+ + G A +  +AR+ +    I ++  ++++    + +++ D
Sbjct: 93  DVLSLTVEDILERRLQTLVFRKGLARTPRQARQLIIHRHIAVDGRVVTSPSYMVSVEEED 152

Query: 398 STGNIK 403
             G  K
Sbjct: 153 KIGYAK 158


>gi|227832272|ref|YP_002833979.1| 30S ribosomal protein S4 [Corynebacterium aurimucosum ATCC 700975]
 gi|262183872|ref|ZP_06043293.1| 30S ribosomal protein S4 [Corynebacterium aurimucosum ATCC 700975]
 gi|254764581|sp|C3PL37|RS4_CORA7 RecName: Full=30S ribosomal protein S4
 gi|227453288|gb|ACP32041.1| 30S ribosomal protein S4 [Corynebacterium aurimucosum ATCC 700975]
          Length = 201

 Score = 40.2 bits (93), Expect = 0.60,   Method: Composition-based stats.
 Identities = 9/48 (18%), Positives = 19/48 (39%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
            +I +AG A +  +AR+ +      +N   I+    ++   D      
Sbjct: 95  NVIYRAGLANTRRQARQLVSHGHFTVNGKKINVPSFRVTQYDIIDVRE 142


>gi|167770840|ref|ZP_02442893.1| hypothetical protein ANACOL_02193 [Anaerotruncus colihominis DSM
           17241]
 gi|167666880|gb|EDS11010.1| hypothetical protein ANACOL_02193 [Anaerotruncus colihominis DSM
           17241]
          Length = 68

 Score = 40.2 bits (93), Expect = 0.60,   Method: Composition-based stats.
 Identities = 9/55 (16%), Positives = 26/55 (47%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           + L  L+  AG   +  +A+  +    +++N  + +    +I+  D  + G +++
Sbjct: 10  IKLDALLKFAGAVQTGGQAKEWITGGMVRVNGELCAMRGKKIRPGDLVNVGELEI 64


>gi|166032509|ref|ZP_02235338.1| hypothetical protein DORFOR_02224 [Dorea formicigenerans ATCC
           27755]
 gi|166026866|gb|EDR45623.1| hypothetical protein DORFOR_02224 [Dorea formicigenerans ATCC
           27755]
          Length = 353

 Score = 40.2 bits (93), Expect = 0.60,   Method: Composition-based stats.
 Identities = 37/236 (15%), Positives = 76/236 (32%), Gaps = 35/236 (14%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGH--KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +     LQ +G   +   ++    ++  +    ++ R+ + +  + 
Sbjct: 11  PTGR-LHVGHYVGSLQERVKLQNSGDYDEIYIMIADAQALTDNAEHPEKVRQNIMNVALD 69

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
                I             K++  + +    L  + +  +     S    N  +  E  +
Sbjct: 70  YLACGI----------DPAKSNIFIQSMVPELTELTFYYMNLVTVSRVQRNPTVKAEIQQ 119

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
              +    + F  F Y I QA D     +     +   G DQ   +    ++  +  +  
Sbjct: 120 RNFEASIPVGF--FCYPISQAADITA-FRATTVPV---GEDQLPMLEQCKEIVHKFNSVY 173

Query: 221 LFALTSP-----------LLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNI 264
              LT P            L    G  KM K+L   I+L+ E     +  +   ++
Sbjct: 174 GETLTEPDIILPSNKACLRLPGIDGKAKMSKSLGNCIYLSDEA---EDIKKKVMSM 226


>gi|58578773|ref|YP_196985.1| tryptophanyl-tRNA synthetase [Ehrlichia ruminantium str.
           Welgevonden]
 gi|58417399|emb|CAI26603.1| Tryptophanyl-tRNA synthetase [Ehrlichia ruminantium str.
           Welgevonden]
          Length = 339

 Score = 40.2 bits (93), Expect = 0.60,   Method: Composition-based stats.
 Identities = 34/213 (15%), Positives = 73/213 (34%), Gaps = 33/213 (15%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   T  S+H G+    +      +  +K    +    ++         S      +  +
Sbjct: 16  GIQPTG-SIHLGNYLGFIRNGVSLQNSYKCFFFLADLHTL--------TSETYNPDELKK 66

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
            +I  +    +  I       ++++ +        + + +   I S   +NRM      +
Sbjct: 67  NSINTLATYLACGID----PENSVLFSQSFIPAHTELLWIFSCITSTGQLNRMTQ---FK 119

Query: 161 SRLKREQSL-SFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
            + + + S  S   ++Y +L A D + L +     +   G DQ  ++    D+ +   T 
Sbjct: 120 EKSRNKVSTASLGLYSYPVLMAADIL-LYQANIVPV---GIDQKQHLELARDIAQAFNTK 175

Query: 220 ---KLFALTSPLLTT--------ASG-TKMGKT 240
              + F L  PL+            G  KM K+
Sbjct: 176 YNTQYFQLPEPLIVQESAKIMSLRDGKKKMSKS 208


>gi|269965448|ref|ZP_06179567.1| pseudouridine synthase family 1 protein [Vibrio alginolyticus 40B]
 gi|269829927|gb|EEZ84157.1| pseudouridine synthase family 1 protein [Vibrio alginolyticus 40B]
          Length = 385

 Score = 40.2 bits (93), Expect = 0.61,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 17/47 (36%), Gaps = 1/47 (2%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG 400
             I + GF  S  EA R ++   + IN +        +   D    G
Sbjct: 11  KFISETGFC-SRREADRLIEQGRVTINGNKPEMGTKVLPGDDVCVDG 56


>gi|260220458|emb|CBA28015.1| Tryptophanyl-tRNA synthetase [Curvibacter putative symbiont of
           Hydra magnipapillata]
          Length = 444

 Score = 40.2 bits (93), Expect = 0.61,   Method: Composition-based stats.
 Identities = 17/83 (20%), Positives = 25/83 (30%), Gaps = 13/83 (15%)

Query: 174 FNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSP------ 227
           F Y +L   D + +   +   +   G DQ  +I    D+              P      
Sbjct: 135 FMYPVLMGADIL-MFNAHKVPV---GRDQIQHIEMARDMAASFNHRYGEHFVPPQAEIEE 190

Query: 228 ---LLTTASGTKMGKTLSGAIWL 247
               L    G KM K+    I L
Sbjct: 191 SVATLPGLDGRKMSKSYDNTIPL 213


>gi|296120174|ref|ZP_06838727.1| conserved domain protein [Corynebacterium ammoniagenes DSM 20306]
 gi|295966866|gb|EFG80138.1| conserved domain protein [Corynebacterium ammoniagenes DSM 20306]
          Length = 96

 Score = 40.2 bits (93), Expect = 0.61,   Method: Composition-based stats.
 Identities = 9/56 (16%), Positives = 19/56 (33%)

Query: 340 SISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
            I        + L   I  A    +  EA+  +   A+ +N  + +     ++  D
Sbjct: 3   DIEVPITGESIKLGQFIKLASLVATGGEAKTAIAEGAVTVNGEVDTRRGASLRAGD 58


>gi|320040475|gb|EFW22408.1| 30S ribosomal subunit S4 [Coccidioides posadasii str. Silveira]
          Length = 463

 Score = 40.2 bits (93), Expect = 0.62,   Method: Composition-based stats.
 Identities = 15/72 (20%), Positives = 32/72 (44%), Gaps = 4/72 (5%)

Query: 325 ECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSII 384
           + F  S+     P + ++   + R + +   I +A FA+ST +AR+ +   A+ +N   +
Sbjct: 110 KVFRRSLPPT--PYMQMTFAPLERRLDVA--IFRAMFASSTRQARQFVVHGAVTVNGKKM 165

Query: 385 SNEKLQIKLQDF 396
                 +   D 
Sbjct: 166 QYPGYLLNPGDL 177


>gi|119196147|ref|XP_001248677.1| hypothetical protein CIMG_02448 [Coccidioides immitis RS]
 gi|303321920|ref|XP_003070954.1| S4 domain containing protein [Coccidioides posadasii C735 delta
           SOWgp]
 gi|240110651|gb|EER28809.1| S4 domain containing protein [Coccidioides posadasii C735 delta
           SOWgp]
          Length = 463

 Score = 40.2 bits (93), Expect = 0.62,   Method: Composition-based stats.
 Identities = 15/72 (20%), Positives = 32/72 (44%), Gaps = 4/72 (5%)

Query: 325 ECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSII 384
           + F  S+     P + ++   + R + +   I +A FA+ST +AR+ +   A+ +N   +
Sbjct: 110 KVFRRSLPPT--PYMQMTFAPLERRLDVA--IFRAMFASSTRQARQFVVHGAVTVNGKKM 165

Query: 385 SNEKLQIKLQDF 396
                 +   D 
Sbjct: 166 QYPGYLLNPGDL 177


>gi|50290293|ref|XP_447578.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49526888|emb|CAG60515.1| unnamed protein product [Candida glabrata]
          Length = 425

 Score = 40.2 bits (93), Expect = 0.62,   Method: Composition-based stats.
 Identities = 17/54 (31%), Positives = 22/54 (40%), Gaps = 6/54 (11%)

Query: 12  LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
            SER F       + LD+         Y G   ++ S+H GHL   M   WLQ 
Sbjct: 81  FSERDF------NKILDLYEQGKPFFLYTGRGPSSGSMHMGHLVPFMFTKWLQD 128


>gi|52143877|ref|YP_082953.1| pseudouridylate synthase [Bacillus cereus E33L]
 gi|51977346|gb|AAU18896.1| pseudouridylate synthase [Bacillus cereus E33L]
          Length = 242

 Score = 40.2 bits (93), Expect = 0.62,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 1/53 (1%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           L  +I +AG A S  +A   ++   +K+N  I+     ++  QD     NI L
Sbjct: 4   LQKVIAQAGIA-SRRKAEELIQQGKVKVNGKIVKELGTKVAPQDKVEVNNIPL 55


>gi|71402319|ref|XP_804088.1| tryptophanyl-tRNA synthetase [Trypanosoma cruzi strain CL Brener]
 gi|70866865|gb|EAN82237.1| tryptophanyl-tRNA synthetase, putative [Trypanosoma cruzi]
          Length = 252

 Score = 40.2 bits (93), Expect = 0.62,   Method: Composition-based stats.
 Identities = 28/162 (17%), Positives = 50/162 (30%), Gaps = 25/162 (15%)

Query: 9   LSILSERGFIHQI----SNPRELDILCSQGVVTAYI--GYDLTASSLHAGHLTQLMLLFW 62
           L     RG +       +    +    + G   AY+  G   +A S+H GH    +L  +
Sbjct: 97  LHHFFRRGIVFSHRDFGTALDCVRASLATGTHRAYLYTGRGPSARSMHIGHCIPFLLTRY 156

Query: 63  LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKI-KGIFSSFIKYGTGKT 121
           LQ           G   +I  P   DE           E    +        + +G    
Sbjct: 157 LQDA--------LGLPLVIQMPD--DEKHFFRDIPVSGERASGLVAENIKDIVAFGFDPR 206

Query: 122 DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL 163
              +  N  ++  +          +   V RML+  +V++  
Sbjct: 207 KTFIFRNTVYMGDMYP--------TVVQVQRMLTLSAVKNTF 240


>gi|149183818|ref|ZP_01862216.1| tryptophanyl-tRNA synthetase [Bacillus sp. SG-1]
 gi|148848467|gb|EDL62719.1| tryptophanyl-tRNA synthetase [Bacillus sp. SG-1]
          Length = 329

 Score = 40.2 bits (93), Expect = 0.62,   Method: Composition-based stats.
 Identities = 52/332 (15%), Positives = 108/332 (32%), Gaps = 60/332 (18%)

Query: 35  VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMM 94
           + T + G   + + +  G+    +  F   +  +     +    + I  P  + E R+ +
Sbjct: 1   MQTIFSGIQPSGT-ITLGNYIGALKQFAELQDDYNCYFCVVDQHA-ITVPQDKMELRKNI 58

Query: 95  RSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRML 154
           +S         I    S+          A       W+  ++ +  + E+       RM 
Sbjct: 59  KSLAALYIASGIDPDKSTLFIQSEVPAHAQ----AGWM--LQCVAYIGEL------ERMT 106

Query: 155 SFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
                + +   + ++S     Y  L A D + L K     +   G DQ  ++    DL E
Sbjct: 107 Q---FKDKSHGKDAVSAGLLTYPPLMAADIL-LYKTNLVPV---GEDQKQHLELTRDLAE 159

Query: 215 RLKTPKLFALTSPLLTTAS-G----------TKMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
           R         T P +     G           KM K+          + +P    +  ++
Sbjct: 160 RFNKKYNDIFTVPEVRIPKVGARVMSLQDPLKKMSKSDPNQKAFITLLDTPKQIEKKIKS 219

Query: 264 -IDDAD---------------VVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEIT 307
            + D+D               ++S    LT   + ++++  +  GK   + K  +A  + 
Sbjct: 220 AVTDSDGIVKFDKENKPGVSNLLSIYSILTGKSVEDLEK--QYDGKGYGDFKGDLAQVVI 277

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTI 339
                     +A T   E ++  I S+ +  I
Sbjct: 278 ----------EALTPIQERYNELIDSEELDEI 299


>gi|313673441|ref|YP_004051552.1| SSU ribosomal protein s4p [Calditerrivibrio nitroreducens DSM
           19672]
 gi|312940197|gb|ADR19389.1| SSU ribosomal protein S4P [Calditerrivibrio nitroreducens DSM
           19672]
          Length = 208

 Score = 40.2 bits (93), Expect = 0.63,   Method: Composition-based stats.
 Identities = 15/61 (24%), Positives = 27/61 (44%), Gaps = 8/61 (13%)

Query: 349 GMGLLTLI--------VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG 400
           G  LL L+         +AGFA+S  +AR+ ++ N   +N   ++     +K+ D     
Sbjct: 89  GENLLQLLERRLDNAVYRAGFASSRTQARQLVRHNHFTVNGKKVNIPSYLLKVGDVIELR 148

Query: 401 N 401
            
Sbjct: 149 E 149


>gi|262203541|ref|YP_003274749.1| 30S ribosomal protein S4 [Gordonia bronchialis DSM 43247]
 gi|262086888|gb|ACY22856.1| ribosomal protein S4 [Gordonia bronchialis DSM 43247]
          Length = 201

 Score = 40.2 bits (93), Expect = 0.63,   Method: Composition-based stats.
 Identities = 16/111 (14%), Positives = 33/111 (29%), Gaps = 16/111 (14%)

Query: 311 HGR------EEAEKAATAAMECFDMSIHSQHMPTI--SISKDEVSRGMGLLTLI------ 356
           HGR      E  ++        F   +  +         ++     G  LL ++      
Sbjct: 36  HGRSRIKESEYLQQLQEKQKARFTYGVLEKQFRRYYEEANRRNGKTGDELLRILETRLDN 95

Query: 357 --VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLS 405
              +AG A +  +AR+ +      +N   +     ++   D        L 
Sbjct: 96  VVYRAGLARTRRQARQMVSHGHFTVNGVKVDVPSYRVGQYDIIDVRPKSLQ 146


>gi|193213678|ref|YP_001999631.1| tryptophanyl-tRNA synthetase [Chlorobaculum parvum NCIB 8327]
 gi|193087155|gb|ACF12431.1| tryptophanyl-tRNA synthetase [Chlorobaculum parvum NCIB 8327]
          Length = 335

 Score = 40.2 bits (93), Expect = 0.63,   Method: Composition-based stats.
 Identities = 33/170 (19%), Positives = 57/170 (33%), Gaps = 33/170 (19%)

Query: 167 QSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLF---- 222
            SL +    Y +LQA D + L K     +   G DQ  ++    ++  +  +        
Sbjct: 119 DSLVYGHLGYPVLQAADIL-LYKGNVVPV---GEDQIPHVEITREIARKFNSHYQHPELG 174

Query: 223 ---------ALTSPLLTTASGT-KMGKTLSGAIWLNK-------EMTSPYNFWQYWRNID 265
                          L    G  KM K+L   I L+        +M       Q  R  +
Sbjct: 175 DVFPEPAPKITKFARLVGLDGKAKMSKSLGNTILLSDGPDEVLAKMRPAVTDTQKVRR-N 233

Query: 266 DA------DVVSFAKRLT-TLPMSEIDRMAKLQGKEINEAKKIIATEITT 308
           D        V S+ ++ T    ++EI+   +       + KK+ A  I+ 
Sbjct: 234 DPGRPEVCLVYSYHQKFTGEAQLAEIEAGCRSGALGCVDCKKMCAANISA 283


>gi|118590702|ref|ZP_01548103.1| pseudouridylate synthase, subunit B protein [Stappia aggregata IAM
           12614]
 gi|118436678|gb|EAV43318.1| pseudouridylate synthase, subunit B protein [Stappia aggregata IAM
           12614]
          Length = 520

 Score = 40.2 bits (93), Expect = 0.63,   Method: Composition-based stats.
 Identities = 9/58 (15%), Positives = 27/58 (46%), Gaps = 1/58 (1%)

Query: 338 TISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           T  ++ +   RG  +  ++ + G   S  EA   +++  +++N  +++   + +   D
Sbjct: 91  TAPLAAEANDRGERIAKVMARVGLC-SRREAEVWIENGRVELNGKLLTTPAVTVTPDD 147


>gi|323491252|ref|ZP_08096437.1| tryptophanyl-tRNA synthetase II [Vibrio brasiliensis LMG 20546]
 gi|323314378|gb|EGA67457.1| tryptophanyl-tRNA synthetase II [Vibrio brasiliensis LMG 20546]
          Length = 340

 Score = 40.2 bits (93), Expect = 0.63,   Method: Composition-based stats.
 Identities = 38/218 (17%), Positives = 67/218 (30%), Gaps = 33/218 (15%)

Query: 45  TASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIE 104
           T   LH GH    +      +  H    L+     +  +            S  I   + 
Sbjct: 20  TGP-LHLGHYVGSLKQRVALQDIHDQTILVADMQGLTDNAH-----NPSKVSSNILNVVA 73

Query: 105 KIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK 164
               +          KT   + +    L  +          +  S++R+    +V+S ++
Sbjct: 74  DYLAVG-----IDPTKTTICLQSQLPALAELTMY-----YSNLVSISRLERNPTVKSEIQ 123

Query: 165 R---EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK---T 218
               E+S+      Y I QA D       ++  L   G DQ   +    ++  ++     
Sbjct: 124 NKGFERSIPAGFLTYPISQAADI----TGFNASLIPVGDDQLPMLEQTNEIVRKINSLAG 179

Query: 219 PKLFALTSPLLTT------ASGT-KMGKTLSGAIWLNK 249
             +     PLL          G  KM KT+  AI L  
Sbjct: 180 RAVLTECRPLLGNAPRLPSTDGKNKMSKTMGNAINLGA 217


>gi|307707886|ref|ZP_07644363.1| tryptophanyl-tRNA synthetase [Streptococcus mitis NCTC 12261]
 gi|307616146|gb|EFN95342.1| tryptophanyl-tRNA synthetase [Streptococcus mitis NCTC 12261]
          Length = 341

 Score = 40.2 bits (93), Expect = 0.63,   Method: Composition-based stats.
 Identities = 41/244 (16%), Positives = 70/244 (28%), Gaps = 42/244 (17%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKT--GHKPISLMGG---GTSIIGDPSFRDESRRMMRSQE 98
            T   LH GH    +    L +    +     +      T    DP              
Sbjct: 12  PTGK-LHIGHYVGSLKNRVLLQEEDKYDMFVFLADQQALTDHAKDPQ------------T 58

Query: 99  IQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
           I E+I  +  +    +     K+   + +    L  +    +     +    N  +  E 
Sbjct: 59  IVESIGNV-ALDYLAVGLDPSKSTIFIQSQIPELAELSMYYMNLVSLARLERNPTVKTEI 117

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
            +          FL   Y I QA D      NY   + +G +DQ   I    ++      
Sbjct: 118 AQKEFGESIPTGFL--VYPIAQAADITAFKANY---VPVG-TDQKPMIEQTREIVRSFNN 171

Query: 219 P-KLFALTSP-----------LLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNI- 264
                 L  P            L    G  KM K+L+  I+L  +  +     +   ++ 
Sbjct: 172 AYNCDVLVEPEGIYPENERAGRLPGLDGNAKMSKSLNNGIYLADDADT---LRKKVMSMY 228

Query: 265 DDAD 268
            D D
Sbjct: 229 TDPD 232


>gi|288802331|ref|ZP_06407771.1| ribosomal large subunit pseudouridine synthase D [Prevotella
           melaninogenica D18]
 gi|288335298|gb|EFC73733.1| ribosomal large subunit pseudouridine synthase D [Prevotella
           melaninogenica D18]
          Length = 296

 Score = 40.2 bits (93), Expect = 0.63,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 29/65 (44%), Gaps = 6/65 (9%)

Query: 346 VSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLS 405
           V+    LL  ++ A    S ++ +  L++  IK+N   ++     +K  D  S     +S
Sbjct: 17  VTAPAPLLEWLL-ANLNESKSKVKATLQNRGIKVNGKCVTQFDHPLKAGDKIS-----VS 70

Query: 406 FGKKN 410
             KKN
Sbjct: 71  KSKKN 75


>gi|281425341|ref|ZP_06256254.1| ribosomal large subunit pseudouridine synthase B [Prevotella oris
           F0302]
 gi|281400504|gb|EFB31335.1| ribosomal large subunit pseudouridine synthase B [Prevotella oris
           F0302]
          Length = 234

 Score = 40.2 bits (93), Expect = 0.63,   Method: Composition-based stats.
 Identities = 10/60 (16%), Positives = 27/60 (45%), Gaps = 1/60 (1%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +  AG   S  EA   + +  + +N ++++    ++   D     +  +S  KK +++ +
Sbjct: 5   LANAGVC-SRREADEFISAGVVSVNGTVVTELGTKVLRSDEVKFHDQLVSLEKKVYVLLN 63


>gi|302346727|ref|YP_003815025.1| pseudouridine synthase, RluA family [Prevotella melaninogenica ATCC
           25845]
 gi|302151131|gb|ADK97392.1| pseudouridine synthase, RluA family [Prevotella melaninogenica ATCC
           25845]
          Length = 296

 Score = 40.2 bits (93), Expect = 0.63,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 29/65 (44%), Gaps = 6/65 (9%)

Query: 346 VSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLS 405
           V+    LL  ++ A    S ++ +  L++  IK+N   ++     +K  D  S     +S
Sbjct: 17  VTAPAPLLEWLL-ANLNESKSKVKATLQNRGIKVNGKCVTQFDHPLKAGDKIS-----VS 70

Query: 406 FGKKN 410
             KKN
Sbjct: 71  KSKKN 75


>gi|114328838|ref|YP_745995.1| lysyl-tRNA synthetase [Granulibacter bethesdensis CGDNIH1]
 gi|114317012|gb|ABI63072.1| class 1 lysyl-tRNA synthetase [Granulibacter bethesdensis CGDNIH1]
          Length = 538

 Score = 40.2 bits (93), Expect = 0.63,   Method: Composition-based stats.
 Identities = 24/172 (13%), Positives = 50/172 (29%), Gaps = 14/172 (8%)

Query: 151 NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGI 210
             ++  +    R +   +    +  +    A  +  L        +M G D   ++    
Sbjct: 219 GTIVWRDENGKRFETPVTGGAAKLQWKADWAMRWYAL----GVDYEMSGKDLIDSVRLSS 274

Query: 211 DLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI----WLNKEMTSPYNFWQYWRNIDD 266
            +   L       LT  L     G K+ K+    +    WL      P +  QY  N   
Sbjct: 275 RICSILGGQPPVTLTYELFLDEHGQKISKSKGNGLSVEEWL--RYAPPESLAQYMYNAP- 331

Query: 267 ADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEK 318
                  +    +     D       K   + +  + T  +  + GR+  ++
Sbjct: 332 ---QRAKRLYFDVIPRAADEYLAHADKAATQDEAALKTNPSWHIAGRQVPDQ 380


>gi|262341316|ref|YP_003284171.1| tryptophan-tRNA ligase [Blattabacterium sp. (Blattella germanica)
           str. Bge]
 gi|262272653|gb|ACY40561.1| tryptophan-tRNA ligase [Blattabacterium sp. (Blattella germanica)
           str. Bge]
          Length = 330

 Score = 40.2 bits (93), Expect = 0.64,   Method: Composition-based stats.
 Identities = 28/114 (24%), Positives = 45/114 (39%), Gaps = 18/114 (15%)

Query: 147 FFSVNRMLSFESVRSRLK--REQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWG 204
           FF   R+    S ++ +K   ++ +S   F+Y IL A D +     Y+ ++   G DQ  
Sbjct: 99  FFPYQRLTLAHSFKNEIKKTNKEKISLGLFSYPILMAADILL----YNAKIVPVGKDQLQ 154

Query: 205 NIICGIDLGERLK---TPKLFALTSPLL-------TTASGTKMGKTLSGAIWLN 248
           +I     +          KLF L +  L           G KM K+     W+N
Sbjct: 155 HIEIARRIASFFNKKIGHKLFVLPNAFLQKKMMSVPGTDGEKMSKSKKN--WIN 206


>gi|254292701|ref|YP_003058724.1| lysyl-tRNA synthetase [Hirschia baltica ATCC 49814]
 gi|254041232|gb|ACT58027.1| lysyl-tRNA synthetase [Hirschia baltica ATCC 49814]
          Length = 539

 Score = 40.2 bits (93), Expect = 0.64,   Method: Composition-based stats.
 Identities = 23/129 (17%), Positives = 34/129 (26%), Gaps = 15/129 (11%)

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            DF           +M G D   N      + + L           L     G K+ K+ 
Sbjct: 250 PDFGMRWAALGVDFEMFGKDHQANAPIYSRICKILGNEPPTQYVYELFLDDKGEKISKSK 309

Query: 242 SGAI----WLNKEMTSPYNFWQY----------WRNIDDADVVSFAKRLTTLPMSEIDRM 287
              I    WL          +Q+          +  I  A V  +   L   P  E  R 
Sbjct: 310 GNGITVEQWLQYAPQESLALFQFQKPRTAKKLHFDVIPKA-VDEYLTFLGKFPEEEPARQ 368

Query: 288 AKLQGKEIN 296
            +     I+
Sbjct: 369 VENPVWHIH 377


>gi|332534329|ref|ZP_08410172.1| 16S rRNA pseudouridylate synthase [Pseudoalteromonas haloplanktis
           ANT/505]
 gi|332036239|gb|EGI72712.1| 16S rRNA pseudouridylate synthase [Pseudoalteromonas haloplanktis
           ANT/505]
          Length = 232

 Score = 40.2 bits (93), Expect = 0.64,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 25/55 (45%), Gaps = 1/55 (1%)

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQD-FDSTGNIKLSFGKKNHIICHLCG 418
             +AR  +K   + +N  +I++   Q+  QD     G   +  GK+ +++    G
Sbjct: 19  RTQARASIKRKEVSVNGEVITSHNFQLAQQDEVLHQGTPLVFLGKRYYMLNKPVG 73


>gi|167765418|ref|ZP_02437531.1| hypothetical protein BACSTE_03806 [Bacteroides stercoris ATCC
           43183]
 gi|167697046|gb|EDS13625.1| hypothetical protein BACSTE_03806 [Bacteroides stercoris ATCC
           43183]
          Length = 234

 Score = 40.2 bits (93), Expect = 0.64,   Method: Composition-based stats.
 Identities = 11/62 (17%), Positives = 27/62 (43%), Gaps = 1/62 (1%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
             +  AG   S  EA   + +  + +N  +++    +IK  D     +  +S  +K +++
Sbjct: 3   KFLANAGVC-SRREADEFITAGVVSVNGEVVTELGTKIKRGDEVKFHDQTVSIERKIYVL 61

Query: 414 CH 415
            +
Sbjct: 62  LN 63


>gi|188582404|ref|YP_001925849.1| lysyl-tRNA synthetase [Methylobacterium populi BJ001]
 gi|179345902|gb|ACB81314.1| lysyl-tRNA synthetase [Methylobacterium populi BJ001]
          Length = 567

 Score = 40.2 bits (93), Expect = 0.64,   Method: Composition-based stats.
 Identities = 19/154 (12%), Positives = 42/154 (27%), Gaps = 7/154 (4%)

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            D+           +M G D   ++     +   L           L     G K+ K+ 
Sbjct: 244 PDWAMRWVALGVDYEMAGKDLIDSVKLSGQIARALGAEPPEGFNYELFLDEKGQKISKSK 303

Query: 242 SGAIWLNK--EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK-EINEA 298
              + +++     +P +   +  N          +    +    +D      G+    EA
Sbjct: 304 GNGLTIDEWLTYATPESLALFMYNKP----REAKRLFFDVIPRHVDEYDNFLGRFAGQEA 359

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIH 332
           K  +   +  +  G   A +    A       + 
Sbjct: 360 KHRLGNPVWHLHAGAPPAVETIDEAGTTLSFGML 393


>gi|319943941|ref|ZP_08018221.1| tryptophan--tRNA ligase [Lautropia mirabilis ATCC 51599]
 gi|319742702|gb|EFV95109.1| tryptophan--tRNA ligase [Lautropia mirabilis ATCC 51599]
          Length = 440

 Score = 40.2 bits (93), Expect = 0.65,   Method: Composition-based stats.
 Identities = 21/83 (25%), Positives = 32/83 (38%), Gaps = 13/83 (15%)

Query: 174 FNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSP------ 227
           + Y +L A D +  + N   R+ +G  DQ  ++    D+ +R        LT P      
Sbjct: 140 YMYPVLMAADILAFSAN---RVPVG-LDQVQHLEIARDVAQRFNHLYGEVLTLPQVQIDE 195

Query: 228 ---LLTTASGTKMGKTLSGAIWL 247
               L    G KM K+    I L
Sbjct: 196 QVGTLPGLDGRKMSKSYDNTIPL 218


>gi|242223228|ref|XP_002477270.1| predicted protein [Postia placenta Mad-698-R]
 gi|220723290|gb|EED77530.1| predicted protein [Postia placenta Mad-698-R]
          Length = 345

 Score = 40.2 bits (93), Expect = 0.65,   Method: Composition-based stats.
 Identities = 20/83 (24%), Positives = 35/83 (42%), Gaps = 6/83 (7%)

Query: 313 REEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHL 372
            + A+K A       +  +     P  S+   EV R + +  L+ +A FA S  EARR +
Sbjct: 104 EDAAQKEAKRLQNEREKGLA----PVGSLMFREVERRIDV--LLFRACFAHSVYEARRMV 157

Query: 373 KSNAIKINNSIISNEKLQIKLQD 395
               + +N    +N   ++   D
Sbjct: 158 VHGDVLLNGKKHTNPNTRLAPGD 180


>gi|254409976|ref|ZP_05023756.1| hemolysin A [Microcoleus chthonoplastes PCC 7420]
 gi|196183012|gb|EDX77996.1| hemolysin A [Microcoleus chthonoplastes PCC 7420]
          Length = 281

 Score = 40.2 bits (93), Expect = 0.65,   Method: Composition-based stats.
 Identities = 8/40 (20%), Positives = 20/40 (50%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL 393
           TL+V      S  +A+R + +  +++N  ++     +I+ 
Sbjct: 7   TLLVDLNLCESRQQAQRLILAGEVRVNQQLVDKPGTEIET 46


>gi|154274852|ref|XP_001538277.1| tryptophanyl-tRNA synthetase [Ajellomyces capsulatus NAm1]
 gi|150414717|gb|EDN10079.1| tryptophanyl-tRNA synthetase [Ajellomyces capsulatus NAm1]
          Length = 390

 Score = 40.2 bits (93), Expect = 0.65,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 20/61 (32%), Gaps = 1/61 (1%)

Query: 15 RGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
          RG      +    L+          Y G   +  +LH GH        WLQ     P+ +
Sbjct: 33 RGLFFSHRDFDNILNKYERGEPFFMYTGRGPSTDALHLGHTIPFSFTKWLQDVFDVPLVI 92

Query: 74 M 74
          M
Sbjct: 93 M 93


>gi|119899984|ref|YP_935197.1| tryptophanyl-tRNA synthetase [Azoarcus sp. BH72]
 gi|119672397|emb|CAL96311.1| TrpS protein [Azoarcus sp. BH72]
          Length = 445

 Score = 40.2 bits (93), Expect = 0.65,   Method: Composition-based stats.
 Identities = 22/103 (21%), Positives = 33/103 (32%), Gaps = 17/103 (16%)

Query: 156 FESVRSRLKREQ----SLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGID 211
             SV   L   +     ++   F Y +L A D + + K +   +   G DQ  +I    D
Sbjct: 121 KASVDKNLADGEDPDAGVNMGLFMYPVLMAADIL-MFKAHSVPV---GRDQIQHIEMARD 176

Query: 212 LGERLKTPKLFALTSP---------LLTTASGTKMGKTLSGAI 245
           +  R           P          L    G KM K+    I
Sbjct: 177 IAARFNHLYGEHFVLPEAAIDESVATLPGLDGRKMSKSYDNVI 219


>gi|296131863|ref|YP_003639110.1| ribosomal protein S4 [Thermincola sp. JR]
 gi|296030441|gb|ADG81209.1| ribosomal protein S4 [Thermincola potens JR]
          Length = 208

 Score = 40.2 bits (93), Expect = 0.66,   Method: Composition-based stats.
 Identities = 10/48 (20%), Positives = 23/48 (47%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
            ++ + GFA+S  EAR+ ++     +N+  ++     +K+ D      
Sbjct: 102 NVVYRLGFASSRTEARQLVRHGHFTVNDKKVNIPSYSLKVGDVIKIKE 149


>gi|164656196|ref|XP_001729226.1| hypothetical protein MGL_3693 [Malassezia globosa CBS 7966]
 gi|159103116|gb|EDP42012.1| hypothetical protein MGL_3693 [Malassezia globosa CBS 7966]
          Length = 358

 Score = 40.2 bits (93), Expect = 0.66,   Method: Composition-based stats.
 Identities = 13/47 (27%), Positives = 20/47 (42%)

Query: 27 LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
          L     Q     Y G   +++S+H GHL   +   WLQ     P+ +
Sbjct: 3  LTRYEQQKPFYLYTGRGPSSASMHLGHLIPFLFTKWLQDVFDVPLVI 49


>gi|119718096|ref|YP_925061.1| 30S ribosomal protein S4 [Nocardioides sp. JS614]
 gi|152112238|sp|A1SNI9|RS4_NOCSJ RecName: Full=30S ribosomal protein S4
 gi|119538757|gb|ABL83374.1| SSU ribosomal protein S4P [Nocardioides sp. JS614]
          Length = 202

 Score = 40.2 bits (93), Expect = 0.66,   Method: Composition-based stats.
 Identities = 20/107 (18%), Positives = 32/107 (29%), Gaps = 16/107 (14%)

Query: 311 HGR------EEAEKAATAAMECFDMSIHSQHMPTI--SISKDEVSRGMGLLTLI------ 356
           HGR      E   +        F   +  +         S+     G  LL L+      
Sbjct: 36  HGRGRIKESEYLLQLREKQKARFTYGVLEKQFHNYYTEASRRAGKTGDNLLQLLECRLDN 95

Query: 357 --VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
              +AGFA +   AR+ +     K+N   +     Q+   D      
Sbjct: 96  VVYRAGFARTRRHARQLVTHGHFKVNGKKVDIPSFQVTAHDVIDVRE 142


>gi|15888079|ref|NP_353760.1| hemolysin [Agrobacterium tumefaciens str. C58]
 gi|15155705|gb|AAK86545.1| hemolysin [Agrobacterium tumefaciens str. C58]
          Length = 250

 Score = 40.2 bits (93), Expect = 0.67,   Method: Composition-based stats.
 Identities = 10/48 (20%), Positives = 18/48 (37%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
           S    L  L+V  G   S + AR  +    + +N  I++     +   
Sbjct: 5   SENERLDQLLVSRGHFASRSRARDAVSRGTVSVNGKIVTKPSQTVAAN 52


>gi|326332343|ref|ZP_08198622.1| cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Nocardioidaceae bacterium Broad-1]
 gi|325949832|gb|EGD41893.1| cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Nocardioidaceae bacterium Broad-1]
          Length = 410

 Score = 40.2 bits (93), Expect = 0.68,   Method: Composition-based stats.
 Identities = 24/175 (13%), Positives = 48/175 (27%), Gaps = 14/175 (8%)

Query: 192 DCRLQMGGSDQWG--NIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
              +Q GGSD     + + G               T   +    G KM K+    ++++ 
Sbjct: 238 GFTVQAGGSDLVFPHHEMSGSHA-RSAGKEFAEIYTHGGMVAYDGHKMSKSRGNLVFVSA 296

Query: 250 EMT---SPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQ--GKEINEAKKIIAT 304
                  P             D   +        + +I    K    G+    A  +   
Sbjct: 297 LRNSEIDPMAIRLVLLGHHYRDDWEWTDAKLFDAVDQIAEWRKAVALGRGAPAAPVV--E 354

Query: 305 EITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKA 359
            +   +    +A +A  A       ++    +   S    +   G  +  L+  A
Sbjct: 355 TVLGALADDLDAPRAVQAVDAWVAATLGEGGLAETS----DALAGETIAKLVDAA 405


>gi|126737408|ref|ZP_01753143.1| lysyl-tRNA synthetase [Roseobacter sp. SK209-2-6]
 gi|126721993|gb|EBA18696.1| lysyl-tRNA synthetase [Roseobacter sp. SK209-2-6]
          Length = 547

 Score = 40.2 bits (93), Expect = 0.68,   Method: Composition-based stats.
 Identities = 18/85 (21%), Positives = 27/85 (31%), Gaps = 6/85 (7%)

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            DF           +M G D   N      +   L        T  L   A+G K+ KT 
Sbjct: 236 PDFGARWAALGVDFEMYGKDHSTNTPIYDGICRVLGHRAPEHFTYELFLDANGQKISKTS 295

Query: 242 SGAIWLNKEMT------SPYNFWQY 260
              I +++ +T        Y  +Q 
Sbjct: 296 GNGISIDEWLTYASTESLAYFMYQK 320


>gi|39996504|ref|NP_952455.1| ribosomal large subunit pseudouridine synthase B [Geobacter
           sulfurreducens PCA]
 gi|39983385|gb|AAR34778.1| ribosomal large subunit pseudouridine synthase B [Geobacter
           sulfurreducens PCA]
 gi|298505521|gb|ADI84244.1| 23S rRNA pseudouridine 2605 synthase [Geobacter sulfurreducens
           KN400]
          Length = 247

 Score = 40.2 bits (93), Expect = 0.68,   Method: Composition-based stats.
 Identities = 9/34 (26%), Positives = 18/34 (52%), Gaps = 1/34 (2%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIIS 385
           L  L+ +AG   S  EA R +    + +N ++++
Sbjct: 5   LQKLLSQAG-VASRREAERFITEGRVAVNGTVVT 37


>gi|89897860|ref|YP_514970.1| tryptophanyl-tRNA synthetase [Chlamydophila felis Fe/C-56]
 gi|89331232|dbj|BAE80825.1| tryptophanyl tRNA synthetase [Chlamydophila felis Fe/C-56]
          Length = 345

 Score = 40.2 bits (93), Expect = 0.68,   Method: Composition-based stats.
 Identities = 43/232 (18%), Positives = 81/232 (34%), Gaps = 41/232 (17%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPI---SLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +    L    +       ++    ++         +R  +R +++ 
Sbjct: 13  PTGK-LHLGHWVGSIK-NRLDLQNNPAYECFFIVADLHTL--------TTR--VRKEQVL 60

Query: 101 ENIEKIKGIFSSFIKYG-TGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLS---- 155
           +    I  + + ++  G      A+ L +   +  I  + LL       SVNR++     
Sbjct: 61  DVDNHIYEVLADWLSVGIDPSKSAIYLQSA--IPEIYELHLL--FSMLISVNRIMGLPSL 116

Query: 156 FESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER 215
            E  ++    E  LS     Y +LQ+ D + LAK     +   G D   ++    D+   
Sbjct: 117 KEMAKNASIEEGGLSLGLVGYPVLQSADIL-LAKAQLVPV---GKDNEAHVELTRDIARN 172

Query: 216 LKTPKLFALTSP----------LLTTASGT-KMGKTLSGAIWLNKEMTSPYN 256
                L+    P           L    G  KM K+ + AI+L+ +     +
Sbjct: 173 FNR--LYGEIFPEPETLQGDLTSLVGIDGQGKMSKSANNAIYLSDDAEIIQD 222


>gi|325852028|ref|ZP_08171111.1| pseudouridine synthase, RluA family [Prevotella denticola CRIS
           18C-A]
 gi|325484584|gb|EGC87500.1| pseudouridine synthase, RluA family [Prevotella denticola CRIS
           18C-A]
          Length = 319

 Score = 40.2 bits (93), Expect = 0.69,   Method: Composition-based stats.
 Identities = 15/65 (23%), Positives = 30/65 (46%), Gaps = 6/65 (9%)

Query: 346 VSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLS 405
           V+    LL  ++      S ++ +  L++  I++N S ++    Q+K  D      + +S
Sbjct: 40  VTEPAPLLEWLL-TNLKESKSKVKATLQNRGIRVNGSCVTQFDRQLKAGD-----KVSVS 93

Query: 406 FGKKN 410
             KKN
Sbjct: 94  KSKKN 98


>gi|313143038|ref|ZP_07805231.1| hemolysin [Helicobacter cinaedi CCUG 18818]
 gi|313128069|gb|EFR45686.1| hemolysin [Helicobacter cinaedi CCUG 18818]
          Length = 234

 Score = 40.2 bits (93), Expect = 0.69,   Method: Composition-based stats.
 Identities = 8/48 (16%), Positives = 23/48 (47%), Gaps = 2/48 (4%)

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF--DSTGNIKLSF 406
             +S  +A+  ++S  +K+N +++      ++  D     + ++ LS 
Sbjct: 4   LCSSRTKAKEAIESGCVKVNGAVVKKGSFLLEKDDEVGVDSKDLLLSR 51


>gi|258623585|ref|ZP_05718580.1| Tryptophanyl-tRNA synthetase [Vibrio mimicus VM573]
 gi|258626792|ref|ZP_05721600.1| Tryptophanyl-tRNA synthetase [Vibrio mimicus VM603]
 gi|258580932|gb|EEW05873.1| Tryptophanyl-tRNA synthetase [Vibrio mimicus VM603]
 gi|258584131|gb|EEW08885.1| Tryptophanyl-tRNA synthetase [Vibrio mimicus VM573]
          Length = 340

 Score = 40.2 bits (93), Expect = 0.69,   Method: Composition-based stats.
 Identities = 35/220 (15%), Positives = 69/220 (31%), Gaps = 33/220 (15%)

Query: 45  TASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIE 104
           T   LH GH    +      +  ++   L+     +  +            S  I   + 
Sbjct: 20  TGP-LHLGHYVGSLKQRVALQEIYEQTILVADMQGLTDNAH-----NPQKVSSNILNVVA 73

Query: 105 KIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK 164
               +          KT   + +    L  +          +  +++R+    +V+S ++
Sbjct: 74  DYLAVG-----IDPTKTTICLQSQLPALAELTMY-----YSNLVTISRLERNPTVKSEIQ 123

Query: 165 R---EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK---T 218
               E+S+      Y I QA D       ++  L   G DQ   +    ++  ++     
Sbjct: 124 NKGFERSIPAGFLTYPISQAADI----TGFNATLVPVGDDQLPMLEQANEIVRKVNLLAG 179

Query: 219 PKLFALTSPLLTT------ASGT-KMGKTLSGAIWLNKEM 251
             +     PLL+         G  KM K++  AI L    
Sbjct: 180 RTVLNECRPLLSNASRLPSTDGKSKMSKSMGNAINLGASP 219


>gi|226360073|ref|YP_002777851.1| pseudouridine synthase [Rhodococcus opacus B4]
 gi|226238558|dbj|BAH48906.1| pseudouridine synthase [Rhodococcus opacus B4]
          Length = 350

 Score = 40.2 bits (93), Expect = 0.69,   Method: Composition-based stats.
 Identities = 10/49 (20%), Positives = 23/49 (46%), Gaps = 1/49 (2%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
             GM L  ++ +AG   S   A   +    ++++  I+  + L+I  ++
Sbjct: 107 GDGMRLQKVLAQAG-VASRRAAEELISQGRVEVDGRIVIEQGLRIDPEN 154


>gi|219849010|ref|YP_002463443.1| tryptophanyl-tRNA synthetase [Chloroflexus aggregans DSM 9485]
 gi|219543269|gb|ACL25007.1| tryptophanyl-tRNA synthetase [Chloroflexus aggregans DSM 9485]
          Length = 336

 Score = 40.2 bits (93), Expect = 0.69,   Method: Composition-based stats.
 Identities = 48/303 (15%), Positives = 94/303 (31%), Gaps = 57/303 (18%)

Query: 33  QGVVTAYIGYDLTASSLHAGHL---TQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDE 89
                 + G   + + LH G+     Q  +    QKT    I  +   T      +   +
Sbjct: 2   NRKPRVFSGIQPSGN-LHIGNYLGAIQQWVAGQGQKTNFICIVDLHAITVPQEPAALHRQ 60

Query: 90  SRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFS 149
           +R +            I    ++       +  A      + L  + +++          
Sbjct: 61  TREL----AALLLACGIDPQQTTLFVQSHVRAHAECAWVFSCLTPLGWLE---------- 106

Query: 150 VNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICG 209
             RM      +++ ++++S+      Y +L A D + L    +  +   G DQ  +I   
Sbjct: 107 --RMTQ---YKTKAQKQESVMTGLLTYPVLMAADIL-LYDADEVPV---GEDQKQHIELT 157

Query: 210 IDL-GER-LKTPKLFALTSPLLTTASGT---------KMGKT---LSGAIWLNKE----- 250
            DL         + F +  P++  +            KM K+      AI +  E     
Sbjct: 158 RDLAQRFNYLYGETFVIPEPVIRESGARIMGLNDPTSKMSKSDTTRGHAIRIVDEPDEIR 217

Query: 251 ---MTSPYNFWQYWRNIDDAD------VVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKI 301
                +  + +   R  DD D      ++   + LT     EI+      GK     K  
Sbjct: 218 WAIKRAVTDSYNEIRFSDDPDRAGVNNLLQIYELLTGKSRPEIEAHFA--GKGYGALKSE 275

Query: 302 IAT 304
           +A 
Sbjct: 276 LAE 278


>gi|227505245|ref|ZP_03935294.1| ribosomal protein S4 [Corynebacterium striatum ATCC 6940]
 gi|227198144|gb|EEI78192.1| ribosomal protein S4 [Corynebacterium striatum ATCC 6940]
          Length = 201

 Score = 40.2 bits (93), Expect = 0.69,   Method: Composition-based stats.
 Identities = 9/48 (18%), Positives = 19/48 (39%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
            ++ +AG A +  +AR+ +      +N   I+    Q+   D      
Sbjct: 95  NVVYRAGLANTRRQARQLVSHGHFTVNGKKINVPSFQVSQYDIIDVRE 142


>gi|254168296|ref|ZP_04875142.1| isoleucyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|197622805|gb|EDY35374.1| isoleucyl-tRNA synthetase [Aciduliprofundum boonei T469]
          Length = 1037

 Score = 40.2 bits (93), Expect = 0.69,   Method: Composition-based stats.
 Identities = 18/86 (20%), Positives = 31/86 (36%), Gaps = 6/86 (6%)

Query: 171 FLEFNYMILQAYDFVELAKNYDCRLQMGGSDQ---WGNIICGIDLGERLKTPKLFALTSP 227
           F +F+Y      +F    +++         DQ   W   +  I      + P    LT  
Sbjct: 535 FAQFHYPYENKDEFE---RSFPVDFITEALDQTRGWFYTLMAISTVVFNRAPYKNVLTLG 591

Query: 228 LLTTASGTKMGKTLSGAIWLNKEMTS 253
           L+    G KM K+   A+   + M +
Sbjct: 592 LILDEDGEKMSKSKGNAVDPMEIMNN 617


>gi|254168356|ref|ZP_04875201.1| isoleucyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|197622637|gb|EDY35207.1| isoleucyl-tRNA synthetase [Aciduliprofundum boonei T469]
          Length = 1037

 Score = 40.2 bits (93), Expect = 0.69,   Method: Composition-based stats.
 Identities = 18/86 (20%), Positives = 31/86 (36%), Gaps = 6/86 (6%)

Query: 171 FLEFNYMILQAYDFVELAKNYDCRLQMGGSDQ---WGNIICGIDLGERLKTPKLFALTSP 227
           F +F+Y      +F    +++         DQ   W   +  I      + P    LT  
Sbjct: 535 FAQFHYPYENKDEFE---RSFPVDFITEALDQTRGWFYTLMAISTVVFNRAPYKNVLTLG 591

Query: 228 LLTTASGTKMGKTLSGAIWLNKEMTS 253
           L+    G KM K+   A+   + M +
Sbjct: 592 LILDEDGEKMSKSKGNAVDPMEIMNN 617


>gi|149239088|ref|XP_001525420.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
           YB-4239]
 gi|146450913|gb|EDK45169.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
           YB-4239]
          Length = 460

 Score = 40.2 bits (93), Expect = 0.69,   Method: Composition-based stats.
 Identities = 22/106 (20%), Positives = 38/106 (35%), Gaps = 9/106 (8%)

Query: 299 KKIIATEITTMVHGREEAEKA--------ATAAMECFDMSIHSQHMPTISISKDEVSRGM 350
           +K  A   T   HG    EK                 D S+  + +    I+    +   
Sbjct: 44  QKWTAKSETRAYHGEHLKEKRFKKVLFDPELKTYSQLDASLKGEAVAPTPITLQTYAALE 103

Query: 351 GLLTLIV-KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
             L   V ++ FA+S  +AR+ +    +K+N   I +    +K  D
Sbjct: 104 KRLEFAVFRSMFASSVRQARQFILGGFVKVNGVKIRHPSFPLKSGD 149


>gi|292493546|ref|YP_003528985.1| tryptophanyl-tRNA synthetase [Nitrosococcus halophilus Nc4]
 gi|291582141|gb|ADE16598.1| tryptophanyl-tRNA synthetase [Nitrosococcus halophilus Nc4]
          Length = 405

 Score = 40.2 bits (93), Expect = 0.70,   Method: Composition-based stats.
 Identities = 26/126 (20%), Positives = 47/126 (37%), Gaps = 20/126 (15%)

Query: 141 LREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGS 200
           ++++G     N  L  E  R R + +  +  LE      +A  F+E  +N    L +G  
Sbjct: 190 IKKMGKK---NAQLYREL-RRRFQEQGDVEALE------KARAFLENQQN----LTLGDR 235

Query: 201 DQWGNIICGIDLGERLKTPKLFALTSPL-LTTASGTKMGKTLSGAIWLNKEMTSPYNFWQ 259
           ++    + G+  G+ +       LT    +    G KM K+    I L +    P     
Sbjct: 236 ERLFGYLEGV--GKTILPEPQALLTPAARMPGLDGQKMSKSYGNTIALREP---PEQVEH 290

Query: 260 YWRNID 265
             R + 
Sbjct: 291 KLRTMP 296


>gi|289595832|ref|YP_003482528.1| isoleucyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|289533619|gb|ADD07966.1| isoleucyl-tRNA synthetase [Aciduliprofundum boonei T469]
          Length = 1024

 Score = 40.2 bits (93), Expect = 0.70,   Method: Composition-based stats.
 Identities = 18/86 (20%), Positives = 31/86 (36%), Gaps = 6/86 (6%)

Query: 171 FLEFNYMILQAYDFVELAKNYDCRLQMGGSDQ---WGNIICGIDLGERLKTPKLFALTSP 227
           F +F+Y      +F    +++         DQ   W   +  I      + P    LT  
Sbjct: 522 FAQFHYPYENKDEFE---RSFPVDFITEALDQTRGWFYTLMAISTVVFNRAPYKNVLTLG 578

Query: 228 LLTTASGTKMGKTLSGAIWLNKEMTS 253
           L+    G KM K+   A+   + M +
Sbjct: 579 LILDEDGEKMSKSKGNAVDPMEIMNN 604


>gi|255642537|gb|ACU21532.1| unknown [Glycine max]
          Length = 324

 Score = 40.2 bits (93), Expect = 0.70,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 29/70 (41%), Gaps = 6/70 (8%)

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS-TGNIKLSFG---- 407
           +  +  AGF  S ++    + +  ++IN   ++ +   +K  D  S +G  +L  G    
Sbjct: 251 VDALASAGFKVSRSKLVDMISNGDVRINWIPVTTKGTTLKSGDIVSISGKGRLKIGEINS 310

Query: 408 -KKNHIICHL 416
            KK      L
Sbjct: 311 TKKGKFAVEL 320


>gi|188995083|ref|YP_001929335.1| ribosomal large subunit pseudouridine synthase B [Porphyromonas
           gingivalis ATCC 33277]
 gi|188594763|dbj|BAG33738.1| ribosomal large subunit pseudouridine synthase B [Porphyromonas
           gingivalis ATCC 33277]
          Length = 439

 Score = 40.2 bits (93), Expect = 0.70,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 26/63 (41%), Gaps = 5/63 (7%)

Query: 337 PTISISKDEV----SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
           P + +   EV    +  + L   +  AG   S  EA   ++   I +N  +++    +I 
Sbjct: 187 PIVPVKYREVLADPNEPIRLNKFLSNAGVC-SRREADLLIEKGEITVNGEVVTELGRRIT 245

Query: 393 LQD 395
            QD
Sbjct: 246 RQD 248


>gi|221068839|ref|ZP_03544944.1| tryptophanyl-tRNA synthetase [Comamonas testosteroni KF-1]
 gi|220713862|gb|EED69230.1| tryptophanyl-tRNA synthetase [Comamonas testosteroni KF-1]
          Length = 433

 Score = 40.2 bits (93), Expect = 0.70,   Method: Composition-based stats.
 Identities = 19/112 (16%), Positives = 38/112 (33%), Gaps = 22/112 (19%)

Query: 164 KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFA 223
           + +  ++   F Y +L   D +    +   ++ +G  DQ  ++    D+        ++ 
Sbjct: 125 EPDDGVTAGLFMYPVLMGADILIFNAS---KVPVG-RDQVQHLEMARDMASSFN--HIYG 178

Query: 224 ---LTSP---------LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
               T P          L    G KM K+ +  I L     +P    +   N
Sbjct: 179 SEYFTLPEAVVEESVATLPGLDGRKMSKSYNNTIPL----FAPREQLRKLIN 226


>gi|160872729|ref|ZP_02062861.1| tryptophanyl-tRNA synthetase [Rickettsiella grylli]
 gi|159121528|gb|EDP46866.1| tryptophanyl-tRNA synthetase [Rickettsiella grylli]
          Length = 365

 Score = 40.2 bits (93), Expect = 0.70,   Method: Composition-based stats.
 Identities = 42/240 (17%), Positives = 71/240 (29%), Gaps = 53/240 (22%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
            T   LH GH    + L    +  +    ++    + +   + R E       +EI++N 
Sbjct: 16  PTGR-LHLGHWVGSLALRVDLQKTYDCYFII----ANVHAFTTRAE-----SPEEIRQNT 65

Query: 104 EKIK-GIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSV--NRMLSFESVR 160
             I     +S I      T + +          +       + SF  V  N  +  E  +
Sbjct: 66  FDIALDYLASGID----PTQSHIFIQSEIPAIAELTSFFSMLISFPRVMRNPTIKEEIRQ 121

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT-- 218
             L       FL   Y I Q  D +    N    +   G DQ  ++    +   R     
Sbjct: 122 KNLGDNYPFGFL--LYPIGQVADILSFRPN----IVPVGEDQIAHLELAREAARRFNQIY 175

Query: 219 --------------------------PKLFALTSPLLTTASGT--KMGKTLSGAIWLNKE 250
                                       +  L       A G   KM K+L+ AI+L+ +
Sbjct: 176 CGVDPHTKDEDYIAKGGLFPIIQAKLSPVRRLVGTGPPNAEGVLPKMSKSLNNAIYLSDD 235


>gi|332295377|ref|YP_004437300.1| ribosomal protein S4 [Thermodesulfobium narugense DSM 14796]
 gi|332178480|gb|AEE14169.1| ribosomal protein S4 [Thermodesulfobium narugense DSM 14796]
          Length = 208

 Score = 40.2 bits (93), Expect = 0.70,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 23/48 (47%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
            ++ ++GFA+S  EAR+ +      +N+  +S     +K  D  S   
Sbjct: 103 NVLYRSGFASSRQEARQMISHGHFNVNSRRVSIPSYSVKPGDVISVRE 150


>gi|298245869|ref|ZP_06969675.1| pseudouridine synthase [Ktedonobacter racemifer DSM 44963]
 gi|297553350|gb|EFH87215.1| pseudouridine synthase [Ktedonobacter racemifer DSM 44963]
          Length = 277

 Score = 40.2 bits (93), Expect = 0.70,   Method: Composition-based stats.
 Identities = 11/63 (17%), Positives = 27/63 (42%), Gaps = 1/63 (1%)

Query: 329 MSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEK 388
            S   + +     + ++ ++G  L   +  AG   S   A   +    +++N +II+ + 
Sbjct: 16  GSDMPEELSAQGQASNQEAQGERLARFLAHAG-VASRRHAEELIAQGRVRVNGTIITAQG 74

Query: 389 LQI 391
            +I
Sbjct: 75  TRI 77


>gi|237714337|ref|ZP_04544818.1| ribosomal large subunit pseudouridine synthase B [Bacteroides sp.
           D1]
 gi|229445501|gb|EEO51292.1| ribosomal large subunit pseudouridine synthase B [Bacteroides sp.
           D1]
          Length = 234

 Score = 40.2 bits (93), Expect = 0.70,   Method: Composition-based stats.
 Identities = 11/62 (17%), Positives = 27/62 (43%), Gaps = 1/62 (1%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
             +  AG   S  EA   + +  + +N  +++    +IK  D     +  +S  +K +++
Sbjct: 3   KFLANAGVC-SRREADEFITAGVVSVNGEVVTELGTKIKRSDVVKFHDEPVSIERKVYVL 61

Query: 414 CH 415
            +
Sbjct: 62  LN 63


>gi|228472245|ref|ZP_04057011.1| ribosomal protein S4 [Capnocytophaga gingivalis ATCC 33624]
 gi|228276448|gb|EEK15172.1| ribosomal protein S4 [Capnocytophaga gingivalis ATCC 33624]
          Length = 201

 Score = 40.2 bits (93), Expect = 0.70,   Method: Composition-based stats.
 Identities = 9/39 (23%), Positives = 16/39 (41%)

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
           G A S   AR+ +    I +N  +++     +K  D   
Sbjct: 103 GIAPSRRAARQLVSHRHITVNGEVVNIPSYSLKPGDIVG 141


>gi|254474865|ref|ZP_05088251.1| lysyl-tRNA synthetase [Ruegeria sp. R11]
 gi|214029108|gb|EEB69943.1| lysyl-tRNA synthetase [Ruegeria sp. R11]
          Length = 547

 Score = 40.2 bits (93), Expect = 0.70,   Method: Composition-based stats.
 Identities = 18/85 (21%), Positives = 27/85 (31%), Gaps = 6/85 (7%)

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            DF           +M G D   N      +   L        T  L   A+G K+ KT 
Sbjct: 236 PDFGARWAALGVDFEMYGKDHSTNTPIYDGICRVLGHRAPEHFTYELFLDANGQKISKTS 295

Query: 242 SGAIWLNKEMT------SPYNFWQY 260
              I +++ +T        Y  +Q 
Sbjct: 296 GNGISIDEWLTYASTESLAYFMYQK 320


>gi|316966763|gb|EFV51304.1| tryptophan--tRNA ligase [Trichinella spiralis]
          Length = 420

 Score = 40.2 bits (93), Expect = 0.71,   Method: Composition-based stats.
 Identities = 58/356 (16%), Positives = 108/356 (30%), Gaps = 65/356 (18%)

Query: 12  LSERGFIHQISNPRELDILCSQ----GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           L  RG        RELD +            Y G   ++S++H GHL   +   +LQ+  
Sbjct: 72  LLRRGVFFAH---RELDKILDSYEKGNPFYLYTGRGPSSSAMHLGHLIPFLFTKYLQEAF 128

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIK--YGTGKTDALM 125
             P+ +              D+ + + +   ++E ++         I   +   KT    
Sbjct: 129 DVPLVI-----------QLTDDEKFLWKDLTVEEAMQMAYENIKDIIAIGFDPEKTFIFA 177

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEF----NYMILQA 181
                  C+  Y ++LR +    + N++              S+  + F          +
Sbjct: 178 DFQYIGQCAEFYQNMLR-VQRNVTYNQV--RGIFG--FTDSDSIGKIVFPATEVAPCFSS 232

Query: 182 YDFVELAKNYD--CRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGT--KM 237
                  +  D  C +     DQ      G D+  +L  PK   + S  +    G   KM
Sbjct: 233 SFPFIFNRRTDIPCLIPC-AIDQDPYFRMGRDIAPKLNYPKPSLIYSTFIPALQGACSKM 291

Query: 238 GKTLSG-AIWLNKE------MTSPYNF---------WQYWRNIDDADV-VSFAKRLTTLP 280
             +    +I+L+          + Y F          + +    D DV   + K      
Sbjct: 292 SASDPNSSIFLSDTPKEVQRKINKYAFSGGRDTIEEHRKFGGNCDIDVSYQYLKYFL--- 348

Query: 281 MSEIDRMAKLQGKEI-------NEAKKIIATEITTMVHGREEAEKAATAAMECFDM 329
             E D      G           E KK +   +  +V  +E +++           
Sbjct: 349 --ENDEKLHQLGSAYSSGSLLTGELKKELIELLQNIV--KEHSKRREEITDNIVSQ 400


>gi|254293522|ref|YP_003059545.1| RNA-binding S4 domain protein [Hirschia baltica ATCC 49814]
 gi|254042053|gb|ACT58848.1| RNA-binding S4 domain protein [Hirschia baltica ATCC 49814]
          Length = 315

 Score = 40.2 bits (93), Expect = 0.71,   Method: Composition-based stats.
 Identities = 7/51 (13%), Positives = 20/51 (39%), Gaps = 1/51 (1%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           +      +   + ++G   S  EA   ++   I I+   ++    +I+  +
Sbjct: 8   DGEEPQRINKWLGQSGVC-SRREAEGLVEQGLISIDGVKVTEPGRKIEKGE 57


>gi|242310659|ref|ZP_04809814.1| RNA pseudouridine synthase [Helicobacter pullorum MIT 98-5489]
 gi|239523057|gb|EEQ62923.1| RNA pseudouridine synthase [Helicobacter pullorum MIT 98-5489]
          Length = 250

 Score = 40.2 bits (93), Expect = 0.71,   Method: Composition-based stats.
 Identities = 9/31 (29%), Positives = 14/31 (45%)

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
           S  EA R +    + IN  II +   Q+  +
Sbjct: 14  SRREADRLIAQGKVSINKEIIKDFSYQVDDK 44


>gi|156742179|ref|YP_001432308.1| pseudouridine synthase [Roseiflexus castenholzii DSM 13941]
 gi|156233507|gb|ABU58290.1| pseudouridine synthase [Roseiflexus castenholzii DSM 13941]
          Length = 309

 Score = 40.2 bits (93), Expect = 0.71,   Method: Composition-based stats.
 Identities = 7/60 (11%), Positives = 20/60 (33%), Gaps = 7/60 (11%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
             G+ L   +  A    S  EA   +    + +N   + +  +++ +        + +  
Sbjct: 9   DPGVSLRDALTAA--LGSEGEAAWLIARGGVWVNGRRVRDPDVRLPV-----DATVVVQR 61


>gi|332653422|ref|ZP_08419167.1| tryptophan--tRNA ligase [Ruminococcaceae bacterium D16]
 gi|332518568|gb|EGJ48171.1| tryptophan--tRNA ligase [Ruminococcaceae bacterium D16]
          Length = 355

 Score = 40.2 bits (93), Expect = 0.72,   Method: Composition-based stats.
 Identities = 46/282 (16%), Positives = 88/282 (31%), Gaps = 53/282 (18%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   +   LH G+    +  +  +         M    +I    +  D  RR +      
Sbjct: 33  GIQPSGD-LHLGNYLGAIKNWGARAEEFDCYYFMADMHTITVRQTPADLRRRTLT----- 86

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
                     + +I  G       +          +   +L     F  ++RM  F+   
Sbjct: 87  --------QLAQYIACGLDPEKNTLFIQSHIPAHAELGWVLNCYTMFGELSRMTQFKD-- 136

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT-- 218
              K   +++   F Y  L A D + L +     +   G+DQ  ++    ++ +R     
Sbjct: 137 KSAKHADNINGGLFTYPALMAADIL-LYQPDFVPV---GNDQKQHVELTRNVAQRFNNIY 192

Query: 219 PKLFALTSPLLTTASGT---------KMGKTLS-GAIWLNKEMTSPYNFWQYW-RNIDDA 267
             +F +  P +               KM K++  G ++L   M  P +  + + R I D+
Sbjct: 193 GDVFKVPEPYIPKTGARIMSLNAPDSKMSKSIPEGCVFL---MEKPEDIQRKFKRAITDS 249

Query: 268 DVVSFAKR-----------------LTTLPMSEIDRMAKLQG 292
           D     +                  +T   M EI+     QG
Sbjct: 250 DTERCVRFDPENKPGVSNLMSIYAAVTGKSMEEIEAEFDGQG 291


>gi|307595749|ref|YP_003902066.1| tryptophanyl-tRNA synthetase [Vulcanisaeta distributa DSM 14429]
 gi|307550950|gb|ADN51015.1| tryptophanyl-tRNA synthetase [Vulcanisaeta distributa DSM 14429]
          Length = 374

 Score = 40.2 bits (93), Expect = 0.72,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 23/63 (36%), Gaps = 2/63 (3%)

Query: 12  LSERGFIHQISNPRELDILCSQGVV-TAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           L  RGF +   + + +      G+    Y G   +A  LH GHL   ML  W     +  
Sbjct: 48  LIRRGFFYAHRDLQSILNRQRSGLRWALYNGRGPSAD-LHIGHLVPWMLSKWFVDKFNVD 106

Query: 71  ISL 73
              
Sbjct: 107 YFF 109


>gi|218671119|ref|ZP_03520790.1| hemolysin A [Rhizobium etli GR56]
          Length = 172

 Score = 40.2 bits (93), Expect = 0.72,   Method: Composition-based stats.
 Identities = 13/61 (21%), Positives = 26/61 (42%), Gaps = 10/61 (16%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIIS--------NEKLQIK--LQDFDSTGNIK 403
            L+V  G   S + AR  ++   ++I   +++        +  + I    QD+ S   +K
Sbjct: 24  QLLVSRGLFASRSRARDAVQRGTVRIAGQVVTKAGALFGADADIAIDDPAQDYVSRAALK 83

Query: 404 L 404
           L
Sbjct: 84  L 84


>gi|254478625|ref|ZP_05091997.1| tryptophanyl-tRNA synthetase [Carboxydibrachium pacificum DSM
           12653]
 gi|214035401|gb|EEB76103.1| tryptophanyl-tRNA synthetase [Carboxydibrachium pacificum DSM
           12653]
          Length = 346

 Score = 40.2 bits (93), Expect = 0.72,   Method: Composition-based stats.
 Identities = 39/239 (16%), Positives = 75/239 (31%), Gaps = 41/239 (17%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN 102
            T   LH GH    +     LQ +G   +  +     +I D      +  +   +++++ 
Sbjct: 11  PTGR-LHIGHYVGSLRQRVELQNSGLYDMIFI-----MIADAQ--ALTDNIDNPEKVRQ- 61

Query: 103 IEKIKGIFSSFIKY-----GTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFE 157
                 I    + Y      + K+   + +  + L  + +  +     S    N  +  E
Sbjct: 62  -----NIIEVALDYLACGLDSTKSTLFVQSQISELFELSFYYMNLVTVSRLQRNPTIKME 116

Query: 158 SVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK 217
                  +   + F  F Y I QA D           + +G  DQ   I    ++  +  
Sbjct: 117 IKMRNFGKNIPVGF--FTYPISQAADITAFKA---TTVPVG-EDQLPMIELTKEIVRKFN 170

Query: 218 TPKLFALTSP-----------LLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNI 264
           +     L  P            L    G  KM K+L+  I+L+          +   N+
Sbjct: 171 SLYGKVLVEPEALLPDNKACQRLPGIDGKSKMSKSLNNCIYLSDTAD---EVKKKVMNM 226


>gi|300088170|ref|YP_003758692.1| 30S ribosomal protein S4 [Dehalogenimonas lykanthroporepellens
           BL-DC-9]
 gi|299527903|gb|ADJ26371.1| ribosomal protein S4 [Dehalogenimonas lykanthroporepellens BL-DC-9]
          Length = 207

 Score = 39.8 bits (92), Expect = 0.72,   Method: Composition-based stats.
 Identities = 12/76 (15%), Positives = 27/76 (35%), Gaps = 3/76 (3%)

Query: 320 ATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKI 379
                  F     ++ +  ++     V     L  ++ + G A S  +AR+ ++   I +
Sbjct: 70  ERQFRRVF---ADAERLAGVTGDNFIVLLERRLDNVVYRLGLADSRAQARQLVRHGHITV 126

Query: 380 NNSIISNEKLQIKLQD 395
           N   +      +K  D
Sbjct: 127 NGRKLDIPSYLVKESD 142


>gi|269978223|ref|ZP_06185173.1| ribosomal large subunit pseudouridine synthase B [Mobiluncus
           mulieris 28-1]
 gi|306818599|ref|ZP_07452322.1| ribosomal large subunit pseudouridine synthase B [Mobiluncus
           mulieris ATCC 35239]
 gi|269933732|gb|EEZ90316.1| ribosomal large subunit pseudouridine synthase B [Mobiluncus
           mulieris 28-1]
 gi|304648772|gb|EFM46074.1| ribosomal large subunit pseudouridine synthase B [Mobiluncus
           mulieris ATCC 35239]
          Length = 278

 Score = 39.8 bits (92), Expect = 0.72,   Method: Composition-based stats.
 Identities = 9/59 (15%), Positives = 23/59 (38%), Gaps = 5/59 (8%)

Query: 333 SQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
               P + I        + L  L+ +AG   S   +   +K   ++++   ++   L++
Sbjct: 29  PGASPAVEIP----EEPVRLQKLLSQAG-VASRRASEDLIKRGRVQVDGETVTEMGLKV 82


>gi|152031676|sp|Q7UXM6|RS4_RHOBA RecName: Full=30S ribosomal protein S4
          Length = 202

 Score = 39.8 bits (92), Expect = 0.72,   Method: Composition-based stats.
 Identities = 6/44 (13%), Positives = 19/44 (43%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
            ++ + GF  +  +AR+ +     ++N   ++     ++  D  
Sbjct: 97  NVVRRVGFTKTRPQARQGITHGHFRVNGVKVTKPGYMLRAGDLI 140


>gi|229918448|ref|YP_002887094.1| tryptophanyl-tRNA synthetase [Exiguobacterium sp. AT1b]
 gi|229469877|gb|ACQ71649.1| tryptophanyl-tRNA synthetase [Exiguobacterium sp. AT1b]
          Length = 333

 Score = 39.8 bits (92), Expect = 0.73,   Method: Composition-based stats.
 Identities = 54/363 (14%), Positives = 109/363 (30%), Gaps = 61/363 (16%)

Query: 35  VVTAYIGYDLTASSLHAGHLTQLMLLF-WLQKTGHKPISLMG--GGTSIIGDPSFRDESR 91
           + T + G   T   +  G+    M  F  LQ   +    ++     T  +      + +R
Sbjct: 1   MATIFSGIKPTGV-VTLGNYLGAMKQFVDLQDDNNAYYCIVDLHSITVQLDRVELMNNTR 59

Query: 92  RMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVN 151
           ++            +    ++       K  A +     W+  +  I  + E+G      
Sbjct: 60  KL----AALYLASGLDPEKATIFVQSEVKAHAQL----GWM--LTCIAGMGELGRMTQ-- 107

Query: 152 RMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGID 211
                   + + +  +++    F Y  L A D +     Y+  L   G DQ  +I    D
Sbjct: 108 -------YKDKSQGSENVGAGLFVYPTLMASDILL----YNTELVPVGDDQKQHIELTRD 156

Query: 212 LGERLKTP--KLFALTSPLLTTASG---------TKMGKTLSGAIWLNKEMTSPYNFWQY 260
           L ER      + F +  PL+               KM K+ + A      +  P    + 
Sbjct: 157 LAERFNKRYYETFTIPEPLIQKEGARIMSLTNPVKKMSKSDTNAKGYISMLDEPNVIRKK 216

Query: 261 WRN-IDDAD------------VVSFAKRLTTLPMSEIDRMAKL-QGKEINEAKKIIATEI 306
            ++ + D+             + +  +  +    + ID + K  +       K+ +A  +
Sbjct: 217 IKSAVTDSSGVISFDRENKPGISNLLEIYSLSTGTPIDDLVKQYENSNYGTFKQDVAEAV 276

Query: 307 TTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTN 366
             +       E       E  D       +     +K E      L  +    G   S  
Sbjct: 277 VAL------LEPIQARYHELIDSPEL-DEILDAGRAKAEAVANKNLAKIEKAMGL--SRK 327

Query: 367 EAR 369
            A+
Sbjct: 328 RAK 330


>gi|150395716|ref|YP_001326183.1| hemolysin A [Sinorhizobium medicae WSM419]
 gi|150027231|gb|ABR59348.1| hemolysin A [Sinorhizobium medicae WSM419]
          Length = 251

 Score = 39.8 bits (92), Expect = 0.73,   Method: Composition-based stats.
 Identities = 7/45 (15%), Positives = 17/45 (37%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
           + L  L++  G   S   AR  ++   +K++   ++         
Sbjct: 9   IRLDQLLLNRGLVASRARARDAIQRGTVKVDGRTVTKPSSTFAEG 53


>gi|86141165|ref|ZP_01059711.1| 30S ribosomal protein S4 [Leeuwenhoekiella blandensis MED217]
 gi|85831724|gb|EAQ50179.1| 30S ribosomal protein S4 [Leeuwenhoekiella blandensis MED217]
          Length = 201

 Score = 39.8 bits (92), Expect = 0.74,   Method: Composition-based stats.
 Identities = 13/82 (15%), Positives = 31/82 (37%), Gaps = 3/82 (3%)

Query: 320 ATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKI 379
                  F+ +  +  +  + + +   SR   ++    + G A S   AR+ +    I +
Sbjct: 66  ENQFRNMFEKATSATGITGVVLLQLCESRLDNVV---FRMGIAPSRRAARQLVSHRHITV 122

Query: 380 NNSIISNEKLQIKLQDFDSTGN 401
           N  +++    Q+K  D  +   
Sbjct: 123 NGELVNIPSYQLKAGDVVAVRE 144


>gi|70991196|ref|XP_750447.1| 30S ribosomal subunit  S4 [Aspergillus fumigatus Af293]
 gi|66848079|gb|EAL88409.1| 30S ribosomal subunit  S4, putative [Aspergillus fumigatus Af293]
 gi|159130921|gb|EDP56034.1| 30S ribosomal subunit S4, putative [Aspergillus fumigatus A1163]
          Length = 469

 Score = 39.8 bits (92), Expect = 0.74,   Method: Composition-based stats.
 Identities = 16/86 (18%), Positives = 33/86 (38%), Gaps = 6/86 (6%)

Query: 315 EAEKAATAAMECFDMSIHSQH----MPTISISKDEVSRGMGLLTLIVKAGFATSTNEARR 370
               A   +    D +  +Q      P   ++   + R + +   I +A FA+ST +AR+
Sbjct: 92  AGRGAGLESEASGDGTAGAQDQTSLTPYTQMTFAPLERRLDVA--IFRAMFASSTRQARQ 149

Query: 371 HLKSNAIKINNSIISNEKLQIKLQDF 396
            +   A+ +N   +      +   D 
Sbjct: 150 FVVHGAVTVNGKKMRYPGYLLNPGDL 175


>gi|304393184|ref|ZP_07375112.1| ribosomal large subunit pseudouridine synthase B [Ahrensia sp.
           R2A130]
 gi|303294191|gb|EFL88563.1| ribosomal large subunit pseudouridine synthase B [Ahrensia sp.
           R2A130]
          Length = 344

 Score = 39.8 bits (92), Expect = 0.75,   Method: Composition-based stats.
 Identities = 9/61 (14%), Positives = 27/61 (44%), Gaps = 1/61 (1%)

Query: 344 DEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
           ++ +    +   + +AG   S  +A R +++  +K+N  +++     +  +D     +  
Sbjct: 13  EKPADAERIAKRMARAGLC-SRRDAERWIEAGRVKVNGKLLTTPAHTVTPRDRIEVDDKL 71

Query: 404 L 404
           L
Sbjct: 72  L 72


>gi|227890935|ref|ZP_04008740.1| ribosomal large subunit pseudouridine synthase B [Lactobacillus
           salivarius ATCC 11741]
 gi|227867344|gb|EEJ74765.1| ribosomal large subunit pseudouridine synthase B [Lactobacillus
           salivarius ATCC 11741]
          Length = 242

 Score = 39.8 bits (92), Expect = 0.75,   Method: Composition-based stats.
 Identities = 10/65 (15%), Positives = 27/65 (41%), Gaps = 2/65 (3%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFG-KKN 410
           L  ++  AG   S   + + ++   + +N  +++    +++  D  S     L    KK 
Sbjct: 5   LQKVMANAG-VASRRASEKLIQEGRVMVNGVVVTELGTKVESDDSISVDGKLLKKDEKKV 63

Query: 411 HIICH 415
           + + +
Sbjct: 64  YYLLY 68


>gi|300778150|ref|ZP_07088008.1| ribosomal large subunit pseudouridine synthase B [Chryseobacterium
           gleum ATCC 35910]
 gi|300503660|gb|EFK34800.1| ribosomal large subunit pseudouridine synthase B [Chryseobacterium
           gleum ATCC 35910]
          Length = 393

 Score = 39.8 bits (92), Expect = 0.75,   Method: Composition-based stats.
 Identities = 12/56 (21%), Positives = 23/56 (41%), Gaps = 1/56 (1%)

Query: 340 SISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
            I KD     + L   I  +G   S  EA   +    +++N  +++    Q++  D
Sbjct: 151 KIEKDVHKDSIRLNKYIANSGIC-SRREADELITQGLVEVNGKVVTEMGYQVQKTD 205


>gi|288919689|ref|ZP_06414016.1| ribosomal protein S4 [Frankia sp. EUN1f]
 gi|288348878|gb|EFC83128.1| ribosomal protein S4 [Frankia sp. EUN1f]
          Length = 209

 Score = 39.8 bits (92), Expect = 0.75,   Method: Composition-based stats.
 Identities = 8/37 (21%), Positives = 18/37 (48%)

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
           GFA S + AR+ ++   +++N   +     ++   D 
Sbjct: 108 GFAPSRDAARQAVRHGHVQVNGRKVDIPSYRVTENDI 144


>gi|227875336|ref|ZP_03993478.1| possible pseudouridine synthase [Mobiluncus mulieris ATCC 35243]
 gi|307700863|ref|ZP_07637888.1| putative pseudouridine synthase B, ribosomal large subunit
           [Mobiluncus mulieris FB024-16]
 gi|227844241|gb|EEJ54408.1| possible pseudouridine synthase [Mobiluncus mulieris ATCC 35243]
 gi|307613858|gb|EFN93102.1| putative pseudouridine synthase B, ribosomal large subunit
           [Mobiluncus mulieris FB024-16]
          Length = 278

 Score = 39.8 bits (92), Expect = 0.75,   Method: Composition-based stats.
 Identities = 9/59 (15%), Positives = 23/59 (38%), Gaps = 5/59 (8%)

Query: 333 SQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
               P + I        + L  L+ +AG   S   +   +K   ++++   ++   L++
Sbjct: 29  PGASPAVEIP----EEPVRLQKLLSQAG-VASRRASEDLIKRGRVQVDGETVTEMGLKV 82


>gi|90961915|ref|YP_535831.1| ribosomal large subunit pseudouridine synthase B [Lactobacillus
           salivarius UCC118]
 gi|301299322|ref|ZP_07205607.1| pseudouridine synthase B, ribosomal large subunit [Lactobacillus
           salivarius ACS-116-V-Col5a]
 gi|90821109|gb|ABD99748.1| Ribosomal large subunit pseudouridine synthase B [Lactobacillus
           salivarius UCC118]
 gi|300214638|gb|ADJ79054.1| Pseudouridine synthase [Lactobacillus salivarius CECT 5713]
 gi|300853062|gb|EFK80661.1| pseudouridine synthase B, ribosomal large subunit [Lactobacillus
           salivarius ACS-116-V-Col5a]
          Length = 242

 Score = 39.8 bits (92), Expect = 0.75,   Method: Composition-based stats.
 Identities = 10/65 (15%), Positives = 27/65 (41%), Gaps = 2/65 (3%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFG-KKN 410
           L  ++  AG   S   + + ++   + +N  +++    +++  D  S     L    KK 
Sbjct: 5   LQKVMANAG-VASRRASEKLIQEGRVMVNGVVVTELGTKVESDDSISVDGKLLKKDEKKV 63

Query: 411 HIICH 415
           + + +
Sbjct: 64  YYLLY 68


>gi|32471308|ref|NP_864301.1| 30S ribosomal protein S4 [Rhodopirellula baltica SH 1]
 gi|32443149|emb|CAD71980.1| 30S ribosomal protein S4 [Rhodopirellula baltica SH 1]
 gi|327541734|gb|EGF28253.1| 30S ribosomal protein S4 [Rhodopirellula baltica WH47]
          Length = 206

 Score = 39.8 bits (92), Expect = 0.75,   Method: Composition-based stats.
 Identities = 6/44 (13%), Positives = 19/44 (43%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
            ++ + GF  +  +AR+ +     ++N   ++     ++  D  
Sbjct: 101 NVVRRVGFTKTRPQARQGITHGHFRVNGVKVTKPGYMLRAGDLI 144


>gi|158317765|ref|YP_001510273.1| RNA-binding S4 domain-containing protein [Frankia sp. EAN1pec]
 gi|158113170|gb|ABW15367.1| RNA-binding S4 domain protein [Frankia sp. EAN1pec]
          Length = 209

 Score = 39.8 bits (92), Expect = 0.75,   Method: Composition-based stats.
 Identities = 8/37 (21%), Positives = 18/37 (48%)

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
           GFA S + AR+ ++   +++N   +     ++   D 
Sbjct: 108 GFAPSRDAARQAVRHGHVQVNGRKVDIPSYRVTENDI 144


>gi|299739156|ref|XP_001835093.2| nam9 protein [Coprinopsis cinerea okayama7#130]
 gi|298403647|gb|EAU86735.2| nam9 protein [Coprinopsis cinerea okayama7#130]
          Length = 390

 Score = 39.8 bits (92), Expect = 0.76,   Method: Composition-based stats.
 Identities = 26/103 (25%), Positives = 43/103 (41%), Gaps = 7/103 (6%)

Query: 312 GREEAEKAATAAMEC----FDMSIHSQHM-PTISISKDEVSRGMGLLTLIVKAGFATSTN 366
           G ++A  A  A  +     FD  I  + M P  S+   EV R + +   + +  FA S  
Sbjct: 94  GDDKAALAEYARRKQREKSFDEEIEEKGMAPVGSLMFQEVERRIDVF--LFRCCFAHSVY 151

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
           EARR +    + +N    +N   ++   D  +     + F KK
Sbjct: 152 EARRMVIHGDVLLNGRKHTNANTRLAPGDMVTVNPDAIRFFKK 194


>gi|225352399|ref|ZP_03743422.1| hypothetical protein BIFPSEUDO_04019 [Bifidobacterium
           pseudocatenulatum DSM 20438]
 gi|225156906|gb|EEG70275.1| hypothetical protein BIFPSEUDO_04019 [Bifidobacterium
           pseudocatenulatum DSM 20438]
          Length = 389

 Score = 39.8 bits (92), Expect = 0.76,   Method: Composition-based stats.
 Identities = 36/256 (14%), Positives = 75/256 (29%), Gaps = 42/256 (16%)

Query: 22  SNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSI 80
           S+     I  + G  T   G   T   LH GH    +     +Q  G     ++      
Sbjct: 51  SDATLAAIEQNPGKFTMLTGDRPTGR-LHLGHYFGSIRERVAMQNRGVNSNIIIADY--- 106

Query: 81  IGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY----GTGKTDALMLNNETWLCSIK 136
                      +++  ++   +IE    + +  + Y       +   +  ++     +  
Sbjct: 107 -----------QVITDRDTTAHIE--DNVLNLVLDYMAAGIDPEKTMIFTHSAVPAENQL 153

Query: 137 YIDLLREIGSFFSVNRMLSFESVRSRLK-REQSLSFLEFNYMILQAYDFVELAKNYDCRL 195
            +  L  +             +V+S ++    +L+ L   Y + QA D   L    +   
Sbjct: 154 MLPFLSLVTEAELHRNP----TVKSEMEASGHALTGLLLTYPVHQACD--ILFCKANVV- 206

Query: 196 QMGGSDQWGNIICGIDLGERLKT----------PKLFALT-SPLLTTASGTKMGKTLSGA 244
              G D   ++     +  R                  L+ +P +    G KM K+   +
Sbjct: 207 -PIGKDNLPHVEITRTIARRFNERYAKKHPVFPEPAAILSEAPEIPGLDGRKMSKSYGNS 265

Query: 245 IWLNKEMTSPYNFWQY 260
           I L           + 
Sbjct: 266 IMLGATAQETAKLIKK 281


>gi|212715757|ref|ZP_03323885.1| hypothetical protein BIFCAT_00657 [Bifidobacterium catenulatum DSM
           16992]
 gi|212661124|gb|EEB21699.1| hypothetical protein BIFCAT_00657 [Bifidobacterium catenulatum DSM
           16992]
          Length = 260

 Score = 39.8 bits (92), Expect = 0.76,   Method: Composition-based stats.
 Identities = 10/55 (18%), Positives = 24/55 (43%), Gaps = 2/55 (3%)

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD--STGNIKLSFG 407
            +++ G   S ++A+R +    + +N   I+    ++   D      G+  +S G
Sbjct: 22  ALLERGLIGSRSKAQRLIADGKVSVNGVDITKVSTKVGCDDIITVDRGDDYVSRG 76


>gi|20808633|ref|NP_623804.1| 30S ribosomal protein S4 [Thermoanaerobacter tengcongensis MB4]
 gi|26399396|sp|Q8R7Y1|RS4_THETN RecName: Full=30S ribosomal protein S4
 gi|20517267|gb|AAM25408.1| Ribosomal protein S4 and related proteins [Thermoanaerobacter
           tengcongensis MB4]
          Length = 206

 Score = 39.8 bits (92), Expect = 0.76,   Method: Composition-based stats.
 Identities = 15/61 (24%), Positives = 24/61 (39%), Gaps = 8/61 (13%)

Query: 349 GMGLLTLI--------VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG 400
           G  LL L+         + GFA S  +AR+ +    I++N   +      +K  D  S  
Sbjct: 89  GENLLQLLERRLDNVVYRLGFAVSRAQARQLVSHGHIEVNGKKVDIPSYLVKPGDVISVK 148

Query: 401 N 401
            
Sbjct: 149 E 149


>gi|86739322|ref|YP_479722.1| 30S ribosomal protein S4 [Frankia sp. CcI3]
 gi|123751487|sp|Q2JFE9|RS4_FRASC RecName: Full=30S ribosomal protein S4
 gi|86566184|gb|ABD09993.1| SSU ribosomal protein S4P [Frankia sp. CcI3]
          Length = 209

 Score = 39.8 bits (92), Expect = 0.77,   Method: Composition-based stats.
 Identities = 9/37 (24%), Positives = 18/37 (48%)

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
           GFA S + AR+ ++   +++N   +     +I   D 
Sbjct: 108 GFAPSRDAARQAVRHGHVQVNGRKVDIPSYRISENDI 144


>gi|45358883|ref|NP_988440.1| 30S ribosomal protein S4P [Methanococcus maripaludis S2]
 gi|61215572|sp|Q6LXN0|RS4_METMP RecName: Full=30S ribosomal protein S4P
 gi|45047749|emb|CAF30876.1| SSU ribosomal protein S4P (S9E) [Methanococcus maripaludis S2]
          Length = 178

 Score = 39.8 bits (92), Expect = 0.77,   Method: Composition-based stats.
 Identities = 19/164 (11%), Positives = 53/164 (32%), Gaps = 24/164 (14%)

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKI 301
               W+ + +       Q +  ++  ++     +L                +      + 
Sbjct: 14  PNHPWIGERIQKEKEISQKYGLVNKKELWKMETQL----------------RNYRRQARK 57

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGM---GLLTLIVK 358
           + ++ TT        ++A          +I  +  PT+          +    L T++ +
Sbjct: 58  LISDTTTQ-----GGKEAVQLFNVLKRYAILIEEEPTLDHVLSLNIESILERRLQTIVFR 112

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNI 402
            G A +  +AR+ +    I +N   ++     I + + D+   +
Sbjct: 113 KGLAKTPKQARQFIVHGHIAVNGKRVTAPAYLISVAENDAIEYV 156


>gi|145220533|ref|YP_001131242.1| tryptophanyl-tRNA synthetase [Prosthecochloris vibrioformis DSM
           265]
 gi|145206697|gb|ABP37740.1| tryptophanyl-tRNA synthetase [Chlorobium phaeovibrioides DSM 265]
          Length = 342

 Score = 39.8 bits (92), Expect = 0.77,   Method: Composition-based stats.
 Identities = 49/247 (19%), Positives = 87/247 (35%), Gaps = 31/247 (12%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTS-IIGDPSFRDESRRMMRSQEI 99
           G   T   LH GH T  +  + +Q+    P    G  T  +I D  + + +  +   +  
Sbjct: 9   GMRPTGK-LHLGHYTGALENWVVQQNLTNPDGTRGCETCFLIAD--YHNLTTSLDTREIY 65

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           Q  IE +    ++ I     K+     +       +  I     I S          E V
Sbjct: 66  QNTIEMLIDWLAAGID--PEKSPVFRQSQIKEHTELFLI-FSMLITSSRLERNPTLKEQV 122

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL--- 216
             R     SL++    Y +LQA D + L K     + +G  DQ  ++    ++  +    
Sbjct: 123 --RDLNMDSLTYGHLGYPVLQAADIL-LYK--GTLVPVG-EDQIPHVEITREIARKFNSH 176

Query: 217 ----KTPKLFALTSPLLTTA------SGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRN-I 264
               ++  +F    P +T         G  KM K+L   I L+       +  +  RN +
Sbjct: 177 YPHPQSGPVFVEPEPKITKFSRLVGLDGKAKMSKSLGNTILLS---DGSEDVMKKMRNAV 233

Query: 265 DDADVVS 271
            D + + 
Sbjct: 234 TDTEKIR 240


>gi|227509265|ref|ZP_03939314.1| tryptophanyl-tRNA synthetase II [Lactobacillus brevis subsp.
           gravesensis ATCC 27305]
 gi|227191263|gb|EEI71330.1| tryptophanyl-tRNA synthetase II [Lactobacillus brevis subsp.
           gravesensis ATCC 27305]
          Length = 338

 Score = 39.8 bits (92), Expect = 0.77,   Method: Composition-based stats.
 Identities = 36/244 (14%), Positives = 80/244 (32%), Gaps = 52/244 (21%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     LQ +G +    ++    ++       D +R     ++I+ 
Sbjct: 12  PTGK-LHIGHYVGSLKNRVELQNSGDYDTFIMIADMQAL------TDNAR---DPEKIRH 61

Query: 102 NIEKIKGIFSSFIKYG----TGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRM---- 153
           ++          + Y       +   +++ +          +L +   +  +V+R+    
Sbjct: 62  SL------IQVALDYLAVGIDPEKSTILVQS----QIPALPELTQHYSNLVTVSRLNRNP 111

Query: 154 -LSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL 212
            +  E  +    +   + F    Y I QA D           + +G  DQ   +    ++
Sbjct: 112 TVKNEIKQKNFGQSVPVGFE--MYPISQAADITAFKA---TTVPVG-DDQEPMLEQTREI 165

Query: 213 GERLKTP-KLFALTSP----------LLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQY 260
                +  K   L  P           +    G  KM K+L  AI+L+ +  +     + 
Sbjct: 166 VRSFNSIYKADILVEPEGYFPPKGMGRIPGLDGNAKMSKSLGNAIYLSDDEDT---ISKK 222

Query: 261 WRNI 264
             ++
Sbjct: 223 VMSM 226


>gi|111220573|ref|YP_711367.1| 30S ribosomal protein S4 [Frankia alni ACN14a]
 gi|123339013|sp|Q0RRP4|RS4_FRAAA RecName: Full=30S ribosomal protein S4
 gi|111148105|emb|CAJ59773.1| 30S ribosomal subunit protein S4 [Frankia alni ACN14a]
          Length = 209

 Score = 39.8 bits (92), Expect = 0.77,   Method: Composition-based stats.
 Identities = 9/37 (24%), Positives = 18/37 (48%)

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
           GFA S + AR+ ++   +++N   +     +I   D 
Sbjct: 108 GFAPSRDAARQAVRHGHVQVNGRKVDIPSYRISENDI 144


>gi|116623183|ref|YP_825339.1| ribosomal large subunit pseudouridine synthase B [Candidatus
           Solibacter usitatus Ellin6076]
 gi|116226345|gb|ABJ85054.1| ribosomal large subunit pseudouridine synthase B [Candidatus
           Solibacter usitatus Ellin6076]
          Length = 264

 Score = 39.8 bits (92), Expect = 0.77,   Method: Composition-based stats.
 Identities = 14/65 (21%), Positives = 28/65 (43%), Gaps = 8/65 (12%)

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK----LSFGKKN 410
           +  KAG A S  +AR+ +    +++N  ++ N    +   D D          L    K+
Sbjct: 19  VFSKAG-AGSRTDARKWISGGKVRVNGKVVLNPDHWV---DPDHDKVTLEGKPLKAATKS 74

Query: 411 HIICH 415
           +I+ +
Sbjct: 75  YILLY 79


>gi|65320645|ref|ZP_00393604.1| COG0180: Tryptophanyl-tRNA synthetase [Bacillus anthracis str.
           A2012]
          Length = 327

 Score = 39.8 bits (92), Expect = 0.77,   Method: Composition-based stats.
 Identities = 21/85 (24%), Positives = 28/85 (32%), Gaps = 17/85 (20%)

Query: 174 FNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPL----- 228
           + Y IL A D + L +     +   G DQ  +I    D+         F  T  L     
Sbjct: 129 YTYPILMAADIL-LFQATHVPV---GKDQIQHIEIARDIATYFN--HTFGTTFTLPEYVI 182

Query: 229 ------LTTASGTKMGKTLSGAIWL 247
                 L    G KM K+    I L
Sbjct: 183 QEEGAILPGLDGRKMSKSYGNVIPL 207


>gi|257054497|ref|YP_003132329.1| 30S ribosomal protein S4 [Saccharomonospora viridis DSM 43017]
 gi|256584369|gb|ACU95502.1| SSU ribosomal protein S4P [Saccharomonospora viridis DSM 43017]
          Length = 202

 Score = 39.8 bits (92), Expect = 0.78,   Method: Composition-based stats.
 Identities = 11/60 (18%), Positives = 22/60 (36%), Gaps = 8/60 (13%)

Query: 347 SRGMGLLTLI--------VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
             G  LL L+         +AG A +  +AR+ +      +N   ++    ++   D   
Sbjct: 80  KTGDNLLQLLESRLDNVVYRAGLARTRRQARQLVSHGHFLVNGEKVNIPSYRVSKFDIID 139


>gi|158338042|ref|YP_001519218.1| hemolysin A [Acaryochloris marina MBIC11017]
 gi|158308283|gb|ABW29900.1| hemolysin A, putative [Acaryochloris marina MBIC11017]
          Length = 272

 Score = 39.8 bits (92), Expect = 0.78,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 24/40 (60%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL 393
           TL+V     TS  +A+R +++  +K+N+ II     +++L
Sbjct: 8   TLLVSLELCTSRQQAQRVIRAGEVKVNDQIIDKPGTEVQL 47


>gi|329766514|ref|ZP_08258057.1| tryptophanyl-tRNA synthetase [Candidatus Nitrosoarchaeum limnia
           SFB1]
 gi|329136769|gb|EGG41062.1| tryptophanyl-tRNA synthetase [Candidatus Nitrosoarchaeum limnia
           SFB1]
          Length = 370

 Score = 39.8 bits (92), Expect = 0.79,   Method: Composition-based stats.
 Identities = 51/261 (19%), Positives = 84/261 (32%), Gaps = 46/261 (17%)

Query: 4   FKSDFLSILSE----------RGFIHQISN-PRELDILCSQGVVTAYIGYDLTASSLHAG 52
             S+ L  + +          RG      +  R LD          Y G   +  + H G
Sbjct: 31  ISSNILERIKKITGEDHFMLRRGIFFSHRDFNRILDDYEKGKKFFLYTGRGPSGHT-HIG 89

Query: 53  HLTQLMLLFWLQ-KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFS 111
           HL   +   WLQ K G      +        D  F  +    +  +E  +          
Sbjct: 90  HLVPWVFSKWLQDKFGVNMYFQLTD------DEKFFSKQN--LTLEETSKFA---YENAL 138

Query: 112 SFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFF--SVNRMLSFESVRSRLKREQSL 169
            FI  G    +  ++ N       K I  L  I +     +N   +          E ++
Sbjct: 139 DFIALGFNPKNTKIIIN------TKNIQTLYPIAAQVAKKINFSNTKAVFG--FTNETNI 190

Query: 170 SFLEFNYMILQ-AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK---LFALT 225
             +   Y  LQ A  F+E   N    + +G  DQ  +     D+  ++  PK   +  + 
Sbjct: 191 GMI--FYTSLQSAPCFIE---NKPVLIPLG-VDQDPHFRLTRDIAPKIGKPKPALIHNIM 244

Query: 226 SPLLTTASGTKMGKT-LSGAI 245
            P L+   G KM  +  +G I
Sbjct: 245 IPGLSGPGG-KMSASDENGTI 264


>gi|320101354|ref|YP_004176946.1| 30S ribosomal protein S4E [Desulfurococcus mucosus DSM 2162]
 gi|319753706|gb|ADV65464.1| SSU ribosomal protein S4E [Desulfurococcus mucosus DSM 2162]
          Length = 252

 Score = 39.8 bits (92), Expect = 0.79,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 25/53 (47%), Gaps = 1/53 (1%)

Query: 346 VSRGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
           + R + LL L+    G+A +  EARR +     K++  +  + K  + L D  
Sbjct: 39  IERSIPLLVLVRNVLGYAETAREARRLIAGGHFKVDGKVRKDYKFPVGLMDVI 91


>gi|154147941|ref|YP_001407262.1| RNA pseudouridine synthase [Campylobacter hominis ATCC BAA-381]
 gi|153803950|gb|ABS50957.1| hypothetical RNA pseudouridine synthase (RNA-uridine isomerase)
           (RNA pseudouridylate synthase) [Campylobacter hominis
           ATCC BAA-381]
          Length = 253

 Score = 39.8 bits (92), Expect = 0.79,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 22/51 (43%), Gaps = 2/51 (3%)

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           S  EA   +K+  + +N  IIS+  ++I   D        +   KK+  + 
Sbjct: 14  SRREADELIKNGKVSVNGRIISDF-IEINESDKIRINKHLIKL-KKDFTMI 62


>gi|298207286|ref|YP_003715465.1| tryptophanyl-tRNA synthetase [Croceibacter atlanticus HTCC2559]
 gi|83849922|gb|EAP87790.1| tryptophanyl-tRNA synthetase [Croceibacter atlanticus HTCC2559]
          Length = 322

 Score = 39.8 bits (92), Expect = 0.79,   Method: Composition-based stats.
 Identities = 27/163 (16%), Positives = 52/163 (31%), Gaps = 21/163 (12%)

Query: 144 IGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQW 203
           +  F+   R+    S + +  R + ++   F Y +L A D +     YD  +   G DQ 
Sbjct: 95  LSCFYPYQRLTLAHSFKDKADRLEDVNAGLFTYPMLMAADILI----YDAEIIPVGKDQL 150

Query: 204 GNIICGIDLGERLKTPKLFALTSP---------LLTTASGTKMGKTLSG--AIWLNKEMT 252
            +I    D+  R           P          +    G KM K+      ++L  +  
Sbjct: 151 QHIEMTRDVASRFHAKLGETFVMPDGKIQEETMYIPGTDGAKMSKSKGNIINLFLPDKKL 210

Query: 253 SPYNFWQYWRNID-----DADVVSFAKRLTTL-PMSEIDRMAK 289
                     +       D D  +       L    ++++M +
Sbjct: 211 RKQIMTIETDSTPLEEPKDTDTCNVFALYKLLGTKEQVEQMMQ 253


>gi|319651915|ref|ZP_08006038.1| pseudouridine synthase [Bacillus sp. 2_A_57_CT2]
 gi|317396407|gb|EFV77122.1| pseudouridine synthase [Bacillus sp. 2_A_57_CT2]
          Length = 239

 Score = 39.8 bits (92), Expect = 0.79,   Method: Composition-based stats.
 Identities = 7/31 (22%), Positives = 17/31 (54%)

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
           S  + ++ LK  A+ +N+  + + K Q+  +
Sbjct: 14  SRKDVKKLLKDGAVTVNDEKVKDPKHQVDPE 44


>gi|258647054|ref|ZP_05734523.1| tryptophan--tRNA ligase [Prevotella tannerae ATCC 51259]
 gi|260853169|gb|EEX73038.1| tryptophan--tRNA ligase [Prevotella tannerae ATCC 51259]
          Length = 363

 Score = 39.8 bits (92), Expect = 0.79,   Method: Composition-based stats.
 Identities = 41/237 (17%), Positives = 72/237 (30%), Gaps = 37/237 (15%)

Query: 44  LTASSLHAGHLTQLMLLFW---LQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH      L     +Q++G      +      I D      +  +   ++++
Sbjct: 12  PTGR-LHIGHYVG--SLRRRVEIQESGDYKQMFV-----FIADAQ--ALTDNVDNPEKVR 61

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           +N+ ++  +    I     K    + +    L  + +   L  +              + 
Sbjct: 62  QNVVEV-ALDYLSIGLDPSKVTMFIQSQIPELTELTFY-FLDLVSVARLQRNPTVKTELA 119

Query: 161 SR-LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQ------------WGNII 207
            R       + F  F Y I QA D           + +G  DQ              N I
Sbjct: 120 MRGFGSSIPVGF--FTYPISQAADITAFKA---TTIPVG-EDQSPMIEQAVEIVRRFNHI 173

Query: 208 CGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNI 264
            G  L E        A    L  T    KM K+L+  I+L++         Q   ++
Sbjct: 174 YGDTLVEPKILLPDNAACLRLPGTDGKAKMSKSLNNCIYLSETEK---ELKQKVMSM 227


>gi|227494659|ref|ZP_03924975.1| hypothetical protein HMPREF0044_0513 [Actinomyces coleocanis DSM
           15436]
 gi|226831841|gb|EEH64224.1| hypothetical protein HMPREF0044_0513 [Actinomyces coleocanis DSM
           15436]
          Length = 80

 Score = 39.8 bits (92), Expect = 0.79,   Method: Composition-based stats.
 Identities = 12/63 (19%), Positives = 23/63 (36%)

Query: 336 MPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           M    I    V+  + L  L+  A       EAR  ++   + I++   +    Q++   
Sbjct: 1   MDNEEIPVITVTGTIRLGQLLKLANLVEDGGEARAAIQGGFVYIDDEQCTQRGKQLQDGQ 60

Query: 396 FDS 398
             S
Sbjct: 61  IVS 63


>gi|157150103|ref|YP_001449329.1| tryptophanyl-tRNA synthetase II [Streptococcus gordonii str.
           Challis substr. CH1]
 gi|157074897|gb|ABV09580.1| tryptophanyl-tRNA synthetase [Streptococcus gordonii str. Challis
           substr. CH1]
          Length = 340

 Score = 39.8 bits (92), Expect = 0.79,   Method: Composition-based stats.
 Identities = 43/230 (18%), Positives = 66/230 (28%), Gaps = 42/230 (18%)

Query: 44  LTASSLHAGHLTQ-LMLLFWLQKTGHKPISLM----GGGTSIIGDPSFRDESRRMMRSQE 98
            T   LH GH    L     LQ  G   + +        T    DP              
Sbjct: 12  PTGK-LHIGHYVGSLRNRVLLQNEGKYDLFVFLADQQALTDHAKDPQ------------- 57

Query: 99  IQENIEKIKGIFSSFIK--YGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSF 156
               IE I  +   ++       K    + +    L  +    +     +    N  +  
Sbjct: 58  --TIIESIGNVALDYLAAGLDPEKVTIFIQSQIPELAELTMYYMNLVSLARLERNPTVKT 115

Query: 157 ESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL 216
           E  +    +     FL   Y I QA D      NY   + +G +DQ   I    ++    
Sbjct: 116 EIAQKGFGQSIPTGFL--VYPISQAADITAFKANY---VPVG-TDQKPMIEQTREIVRSF 169

Query: 217 KTPKL-FALTSP-----------LLTTASGT-KMGKTLSGAIWLNKEMTS 253
                   L  P            L    G  KM K+L+  I+L  +M +
Sbjct: 170 NNAYQKDVLVEPEGIYPENEAAGRLPGLDGNAKMSKSLNNGIYLADDMDT 219


>gi|300114575|ref|YP_003761150.1| tryptophanyl-tRNA synthetase [Nitrosococcus watsonii C-113]
 gi|299540512|gb|ADJ28829.1| tryptophanyl-tRNA synthetase [Nitrosococcus watsonii C-113]
          Length = 405

 Score = 39.8 bits (92), Expect = 0.80,   Method: Composition-based stats.
 Identities = 39/235 (16%), Positives = 69/235 (29%), Gaps = 72/235 (30%)

Query: 141 LREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGS 200
           ++++G     N  L  E  R R + +  +  L+      +A  F+E  +N    L +G  
Sbjct: 190 IKKMGKK---NAQLYREL-RRRFQEQGDVEALD------KARAFLETQQN----LTLGDR 235

Query: 201 DQWGNIICGIDLGERLKTPKLFALTSPL-LTTASGTKMGKTLSGAIWLNKEMTSPYNFWQ 259
           ++    + G   G+ +       LT    +    G KM K+    I L +    P    +
Sbjct: 236 ERLFGHLEGE--GKVILPEPQALLTPAARMPGLDGQKMSKSYGNTIALREP---PEQVER 290

Query: 260 YWRNID------------DAD---VVSFAKRLTTL------------------------- 279
             R +             D +   V  F K  +                           
Sbjct: 291 KLRTMPTDPARVRRSDPGDPEKCPVWQFHKVYSDEEVKGWVQKGCRTAGIGCLDCKQPII 350

Query: 280 -----PMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDM 329
                 +  I   A+   +   E ++II         G E A + A   M     
Sbjct: 351 DAIQSELKPIRERAQEYARHPEEVQRIIKE-------GNEAAREVARETMAEVRQ 398


>gi|300741224|ref|ZP_07071245.1| ribosomal large subunit pseudouridine synthase B [Rothia
           dentocariosa M567]
 gi|300380409|gb|EFJ76971.1| ribosomal large subunit pseudouridine synthase B [Rothia
           dentocariosa M567]
          Length = 357

 Score = 39.8 bits (92), Expect = 0.81,   Method: Composition-based stats.
 Identities = 8/50 (16%), Positives = 20/50 (40%), Gaps = 1/50 (2%)

Query: 348 RGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
            G+ L  L+ +AG   S       +    + +N  +++   +++   D  
Sbjct: 117 DGVRLQKLMAQAG-VASRRVCEEMITEGRVTVNGEVVTELGVRVNPADVI 165


>gi|169334959|ref|ZP_02862152.1| hypothetical protein ANASTE_01365 [Anaerofustis stercorihominis DSM
           17244]
 gi|169257697|gb|EDS71663.1| hypothetical protein ANASTE_01365 [Anaerofustis stercorihominis DSM
           17244]
          Length = 1032

 Score = 39.8 bits (92), Expect = 0.81,   Method: Composition-based stats.
 Identities = 24/113 (21%), Positives = 41/113 (36%), Gaps = 19/113 (16%)

Query: 168 SLSFLEFNYMILQAYDFVELA-KNYDCRLQMGGSDQ---WGNIICGIDLGERLKTPKLFA 223
           S+ F + +Y      +F E    N+ C     G DQ   W   +  I      K P    
Sbjct: 522 SMPFAQQHYPFENKEEFEEQFPANFICE----GIDQTRGWFYSLLAISTFIMKKAPYKSV 577

Query: 224 LTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRL 276
           L + L+  A+G KM K+    +        P++ +  +     AD + +    
Sbjct: 578 LVNDLILDANGQKMSKSKGNTV-------DPFDLFDKY----GADALRWYLLY 619


>gi|150392132|ref|YP_001322181.1| ribosomal protein S4 [Alkaliphilus metalliredigens QYMF]
 gi|171460826|sp|A6TWF4|RS4A_ALKMQ RecName: Full=30S ribosomal protein S4 A
 gi|149951994|gb|ABR50522.1| ribosomal protein S4 [Alkaliphilus metalliredigens QYMF]
          Length = 207

 Score = 39.8 bits (92), Expect = 0.81,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 18/42 (42%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
            L+ + G A+S  EAR+ +      +N   +      +K  D
Sbjct: 102 NLVYRLGLASSRAEARQLVVHGHFTVNGGKVDIPSYLVKAGD 143


>gi|38233157|ref|NP_938924.1| 30S ribosomal protein S4 [Corynebacterium diphtheriae NCTC 13129]
 gi|61215596|sp|Q6NJ64|RS4_CORDI RecName: Full=30S ribosomal protein S4
 gi|38199416|emb|CAE49059.1| 30S ribosomal protein S4 [Corynebacterium diphtheriae]
          Length = 201

 Score = 39.8 bits (92), Expect = 0.81,   Method: Composition-based stats.
 Identities = 13/104 (12%), Positives = 30/104 (28%), Gaps = 10/104 (9%)

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSR--GMGLLTLI--------V 357
             +   E   +        F   +  +         + +    G  L+ L+         
Sbjct: 39  ARIKESEYLLQLQEKQKARFTYGVLEKQFRRYYAEANRLPGKTGDNLVILLESRLDNVVY 98

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
           +AG A +  +AR+ +      +N   I+    ++   D      
Sbjct: 99  RAGLARTRRQARQLVSHGHFTVNGKKINVPSYRVSQYDIIDVRE 142


>gi|326334520|ref|ZP_08200731.1| 30S ribosomal protein S4 [Capnocytophaga sp. oral taxon 338 str.
           F0234]
 gi|325693289|gb|EGD35217.1| 30S ribosomal protein S4 [Capnocytophaga sp. oral taxon 338 str.
           F0234]
          Length = 201

 Score = 39.8 bits (92), Expect = 0.81,   Method: Composition-based stats.
 Identities = 9/39 (23%), Positives = 16/39 (41%)

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
           G A S   AR+ +    I +N  +++     +K  D   
Sbjct: 103 GIAPSRRAARQLVSHRHITVNGEVVNIPSYSLKAGDIVG 141


>gi|313159346|gb|EFR58710.1| pseudouridylate synthase [Alistipes sp. HGB5]
          Length = 423

 Score = 39.8 bits (92), Expect = 0.81,   Method: Composition-based stats.
 Identities = 9/59 (15%), Positives = 25/59 (42%), Gaps = 2/59 (3%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           + ++G   S  EA   + +  + +N  I++    ++   D     + ++  G+K   + 
Sbjct: 195 LAQSGLC-SRREADDFITAGLVTVNGQIVTQLGTKVLPTDEVKFNDSRVQ-GEKKVYLV 251


>gi|197285587|ref|YP_002151459.1| tryptophanyl-tRNA synthetase [Proteus mirabilis HI4320]
 gi|194683074|emb|CAR43593.1| putative tryptophanyl-tRNA synthetase [Proteus mirabilis HI4320]
          Length = 339

 Score = 39.8 bits (92), Expect = 0.81,   Method: Composition-based stats.
 Identities = 36/228 (15%), Positives = 68/228 (29%), Gaps = 31/228 (13%)

Query: 45  TASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIE 104
           T   LH GH    +      +       LM     +  + S  ++  + +          
Sbjct: 19  TGP-LHLGHYIGSLQQRVEFQKKATQYILMADMQGLTDNGSTPEKVSKFLFDVVADYLAV 77

Query: 105 KIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK 164
            I    S+            + +    L  +  + L     S    N  +  E ++  L 
Sbjct: 78  GIDPKLSTL----------CLQSALPALSELTMLYLNIVTVSRLERNPTVKHEILQKNLS 127

Query: 165 REQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT------ 218
           R     FL   Y + QA D    + +    +   G DQ   I    ++  ++ +      
Sbjct: 128 RSLPAGFL--TYPVSQAADITAFSAD----IVPAGEDQLPMIEQTNEIVTKINSLIGQPV 181

Query: 219 ----PKLFALTSPLLTTASGTKMGKTLSGAIWL----NKEMTSPYNFW 258
                 +      L  T    KM K+L   I L    ++   + Y+ +
Sbjct: 182 LTSCKVVVGQVGRLPGTDGSGKMSKSLGNTINLSSTADEIKKAVYSMY 229


>gi|313888048|ref|ZP_07821726.1| isoleucine--tRNA ligase [Peptoniphilus harei ACS-146-V-Sch2b]
 gi|312846003|gb|EFR33386.1| isoleucine--tRNA ligase [Peptoniphilus harei ACS-146-V-Sch2b]
          Length = 1033

 Score = 39.8 bits (92), Expect = 0.82,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 41/112 (36%), Gaps = 19/112 (16%)

Query: 169 LSFLEFNYMILQAYDFVELA-KNYDCRLQMGGSDQ---WGNIICGIDLGERLKTPKLFAL 224
           + F +++Y      +F EL   ++ C     G DQ   W   +  I      K+P    L
Sbjct: 525 MPFAQWHYPFENKDNFDELFPADFICE----GIDQTRGWFYSLIAISTYMTGKSPYKNVL 580

Query: 225 TSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRL 276
            + L+    G KM K+    +        P+  +  +     ADVV +    
Sbjct: 581 VNDLILDKEGKKMSKSRGNTVA-------PFELFDKY----GADVVRWYLLY 621


>gi|255530540|ref|YP_003090912.1| 30S ribosomal protein S4 [Pedobacter heparinus DSM 2366]
 gi|255343524|gb|ACU02850.1| ribosomal protein S4 [Pedobacter heparinus DSM 2366]
          Length = 202

 Score = 39.8 bits (92), Expect = 0.82,   Method: Composition-based stats.
 Identities = 14/87 (16%), Positives = 28/87 (32%), Gaps = 19/87 (21%)

Query: 320 ATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVK--------AGFATSTNEARRH 371
                  F  +     +            G  LL L+           G AT+ + AR+ 
Sbjct: 66  ERQFRNLFTKASSRGGI-----------TGDNLLQLLEARLDNTVYRLGIATTRSAARQL 114

Query: 372 LKSNAIKINNSIISNEKLQIKLQDFDS 398
           +    + +N  +++    Q+K  D  +
Sbjct: 115 VSHKHVTVNGEVVNIPSYQLKAGDVIA 141


>gi|170764289|ref|ZP_02640490.2| tryptophanyl-tRNA synthetase [Clostridium perfringens CPE str.
           F4969]
 gi|170713690|gb|EDT25872.1| tryptophanyl-tRNA synthetase [Clostridium perfringens CPE str.
           F4969]
          Length = 341

 Score = 39.8 bits (92), Expect = 0.82,   Method: Composition-based stats.
 Identities = 41/261 (15%), Positives = 79/261 (30%), Gaps = 33/261 (12%)

Query: 25  RELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDP 84
              + L        + G   +   L  G+    +  +   +  +     +    +I    
Sbjct: 4   EASEKLMEDKKKIIFSGIQPSGD-LTLGNYLGAIKNWTKLQEEYDCYFCVVDLHAITVKQ 62

Query: 85  SFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREI 144
              D  RR +    I           + FI     ++     +  +WL  +     + E+
Sbjct: 63  LPADLRRRTLEVLAIYIASGIDPEKNTLFI-----QSHVPAHSEASWL--LTCNSYMGEL 115

Query: 145 GSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWG 204
                 +RM  ++    ++          FNY +L A D +     Y+  L   G DQ  
Sbjct: 116 ------SRMTQYKDKSKKMGDSIGAGL--FNYPVLMAADILL----YNADLVPVGKDQMQ 163

Query: 205 NIICGIDLGERLKTPKLFALTSP----------LLTTAS-GTKMGKTLSGAIWLNKEMTS 253
           ++    D+  R         T P          ++       KM K+ S        M  
Sbjct: 164 HLELARDIAARFNNSYSKTFTIPEGYIPKEGAKIMDLQDPSKKMSKSDSNPNSFILMMDE 223

Query: 254 PYNFWQYW-RNIDDAD-VVSF 272
           P    +   R + D+  VV++
Sbjct: 224 PNVIRKKISRAVTDSIGVVNY 244


>gi|163754752|ref|ZP_02161874.1| tryptophan--tRNA ligase [Kordia algicida OT-1]
 gi|161325693|gb|EDP97020.1| tryptophan--tRNA ligase [Kordia algicida OT-1]
          Length = 322

 Score = 39.8 bits (92), Expect = 0.82,   Method: Composition-based stats.
 Identities = 26/108 (24%), Positives = 43/108 (39%), Gaps = 13/108 (12%)

Query: 147 FFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNI 206
           FF  NR+    S + +  R + ++   F Y +L A D +     YD  +   G DQ  ++
Sbjct: 98  FFPYNRLKLAHSFKDKAGRLEDVNAGLFTYPMLMAADILL----YDAEIVPVGKDQEQHL 153

Query: 207 ICGIDLGERLKTP--KLFAL-------TSPLLTTASGTKMGKTLSGAI 245
                +  R      + F L        + L+    GTKM K+ +  I
Sbjct: 154 EITRSVATRFHEKLGETFILPEAKTREATKLVPGTDGTKMSKSKNNII 201


>gi|330983534|gb|EGH81637.1| tryptophanyl-tRNA synthetase [Pseudomonas syringae pv. lachrymans
           str. M301315]
          Length = 453

 Score = 39.8 bits (92), Expect = 0.83,   Method: Composition-based stats.
 Identities = 21/95 (22%), Positives = 33/95 (34%), Gaps = 17/95 (17%)

Query: 166 EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLG----ERLKTPKL 221
           E  ++   F+Y +L A D + L   +D  +   G DQ  ++    D+G          + 
Sbjct: 126 EAGITMGLFSYPVLMAADIL-LFNAHDIPV---GRDQVQHVELAKDIGQRFNHIFGKGER 181

Query: 222 FALTSP---------LLTTASGTKMGKTLSGAIWL 247
                P          L    G KM K+    I L
Sbjct: 182 SFFRMPNAVVDQNVATLPGLDGRKMSKSYDNTIPL 216


>gi|330833975|ref|YP_004408703.1| tryptophanyl-tRNA synthetase [Metallosphaera cuprina Ar-4]
 gi|329566114|gb|AEB94219.1| tryptophanyl-tRNA synthetase [Metallosphaera cuprina Ar-4]
          Length = 380

 Score = 39.8 bits (92), Expect = 0.83,   Method: Composition-based stats.
 Identities = 43/231 (18%), Positives = 76/231 (32%), Gaps = 33/231 (14%)

Query: 27  LDILCSQGVVTAYIGYDLTASSL--HAGHLTQLMLLFWLQ-KTGHKPISLMGGGTSIIGD 83
           L           Y G    A SL  H GH+   +   WLQ K G      +        D
Sbjct: 64  LKEWKEGRSFFLYTG---RAPSLGMHIGHMIPFVFTAWLQKKFGVNVYIEITD------D 114

Query: 84  PSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLRE 143
             F       +  Q  Q  ++ I  I ++            +  +  ++ ++  +     
Sbjct: 115 EKFMRNLEYSLD-QTRQWALDNILDIIAAGFDPDKT----FIFQDTEYIRNMYPL----- 164

Query: 144 IGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQW 203
                 + + L+F  V++    + S +     Y  LQ      + +   C +  G  DQ 
Sbjct: 165 ---AIKIAKKLTFSEVKATFGLDVSSNIGIIFYPSLQ--IVPTMFEKRRCLIPAG-IDQD 218

Query: 204 GNIICGIDLGE---RLKTPKLFALTSPLLTTASGTKMGKTLS-GAIWLNKE 250
                  D+ E     K  ++ +   P LT   G KM  ++   AI+L  +
Sbjct: 219 PYWRLQRDIAESLGYYKAAQIHSKFLPPLTGPEG-KMSSSVPESAIYLIDD 268


>gi|219120673|ref|XP_002181070.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217407786|gb|EEC47722.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 331

 Score = 39.8 bits (92), Expect = 0.83,   Method: Composition-based stats.
 Identities = 16/73 (21%), Positives = 33/73 (45%), Gaps = 5/73 (6%)

Query: 337 PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
           P  SI   +  R   +L+L  +     S  EA R ++S  + +  +++++  + +K +D 
Sbjct: 27  PHASIFSTDTVRLSKVLSLHTE-NLVISRREAERMIRSGDVTLAGNVLTSPMMMLKEEDL 85

Query: 397 DSTGNIKLSF-GK 408
           +      L   GK
Sbjct: 86  NDGA---LKVNGK 95


>gi|213690986|ref|YP_002321572.1| tryptophanyl-tRNA synthetase [Bifidobacterium longum subsp.
           infantis ATCC 15697]
 gi|213522447|gb|ACJ51194.1| tryptophanyl-tRNA synthetase [Bifidobacterium longum subsp.
           infantis ATCC 15697]
 gi|320457036|dbj|BAJ67657.1| tryptophanyl-tRNA synthase [Bifidobacterium longum subsp. infantis
           ATCC 15697]
          Length = 363

 Score = 39.8 bits (92), Expect = 0.83,   Method: Composition-based stats.
 Identities = 34/256 (13%), Positives = 74/256 (28%), Gaps = 42/256 (16%)

Query: 22  SNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSI 80
           S+     +       T   G   T   LH GH    +     +Q+ G     ++      
Sbjct: 25  SDETLAKLEAKPSSFTMLTGDRPTGR-LHLGHYFGSIRERVAMQERGVNTNIIIADY--- 80

Query: 81  IGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY----GTGKTDALMLNNETWLCSIK 136
                      +++  ++  E+I+    + +  + Y           +  ++     +  
Sbjct: 81  -----------QVITDRDTTEHIQ--DNVLNLVLDYMAAGIDPNKTMMFTHSAVPAENQL 127

Query: 137 YIDLLREIGSFFSVNRMLSFESVRSRLK-REQSLSFLEFNYMILQAYDFVELAKNYDCRL 195
            +  L  +             +V+S ++    +L+ L   Y + QA D   L    +   
Sbjct: 128 LLPFLSLVTEAELHRNP----TVKSEMEASGHALTGLLLTYPVHQACD--ILFCKANVV- 180

Query: 196 QMGGSDQWGNIICGIDLGERLKT----------PKLFALT-SPLLTTASGTKMGKTLSGA 244
              G D   ++     +  R                  L+ +P +    G KM K+   +
Sbjct: 181 -PIGKDNLPHVEITRTIARRFNERYAKKNPVFPEPAAILSEAPEIPGLDGRKMSKSYGNS 239

Query: 245 IWLNKEMTSPYNFWQY 260
           I L           + 
Sbjct: 240 IMLGATAEETAKLIKK 255


>gi|161897894|ref|YP_435862.2| tryptophanyl-tRNA synthetase [Hahella chejuensis KCTC 2396]
          Length = 404

 Score = 39.8 bits (92), Expect = 0.83,   Method: Composition-based stats.
 Identities = 25/142 (17%), Positives = 46/142 (32%), Gaps = 34/142 (23%)

Query: 133 CSIKYIDLLREIGSFFS----------------VNRMLSF-----ESVRSRLKREQSLSF 171
             + +I++ RE+   F+                + RM        ES+R R   +     
Sbjct: 156 DQVSHIEMTREVARRFNHLYGREPGFEEQAEAAIKRMGKKTAKLYESLRKRYLEQGDGEA 215

Query: 172 LEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPL-LT 230
           LE    +L+    + L          G  ++    + G   G+ +       LT    + 
Sbjct: 216 LETARALLRDQQNISL----------GDRERLYGFLEGG--GKVILPEPQVLLTPEAKMP 263

Query: 231 TASGTKMGKTLSGAIWLNKEMT 252
              G KM K+    I L ++  
Sbjct: 264 GLDGQKMSKSYGNTIGLREDAD 285


>gi|15605669|ref|NP_213044.1| 30S ribosomal protein S4 [Aquifex aeolicus VF5]
 gi|6226103|sp|O66484|RS4_AQUAE RecName: Full=30S ribosomal protein S4
 gi|2982819|gb|AAC06442.1| ribosomal protein S04 [Aquifex aeolicus VF5]
          Length = 211

 Score = 39.8 bits (92), Expect = 0.83,   Method: Composition-based stats.
 Identities = 7/48 (14%), Positives = 21/48 (43%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
            ++ + GFA++  +AR+ +    + +N   ++     ++  D      
Sbjct: 102 NVVYRLGFASTRRQARQLVAHGHVLVNGKKVNIPSYLVEPGDVIEIKE 149


>gi|58616832|ref|YP_196031.1| tryptophanyl-tRNA synthetase [Ehrlichia ruminantium str. Gardel]
 gi|58416444|emb|CAI27557.1| Tryptophanyl-tRNA synthetase [Ehrlichia ruminantium str. Gardel]
          Length = 340

 Score = 39.8 bits (92), Expect = 0.83,   Method: Composition-based stats.
 Identities = 34/213 (15%), Positives = 73/213 (34%), Gaps = 33/213 (15%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   T  S+H G+    +      +  +K    +    ++         S      +  +
Sbjct: 16  GIQPTG-SIHLGNYLGFIRNGVSLQNSYKCFFFLADLHTL--------TSEAYNPDELKK 66

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
            +I  +    +  I       ++++ +        + + +   I S   +NRM      +
Sbjct: 67  NSINTLATYLACGID----PENSVLFSQSFIPAHTELLWIFSCITSTGQLNRMTQ---FK 119

Query: 161 SRLKREQSL-SFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
            + + + S  S   ++Y +L A D + L +     +   G DQ  ++    D+ +   T 
Sbjct: 120 EKSRNKVSTASLGLYSYPVLMAADIL-LYQANIVPV---GIDQKQHLELARDIAQAFNTK 175

Query: 220 ---KLFALTSPLLTT--------ASG-TKMGKT 240
              + F L  PL+            G  KM K+
Sbjct: 176 YNTQYFQLPEPLIVQESAKIMSLRDGKKKMSKS 208


>gi|330996052|ref|ZP_08319946.1| pseudouridylate synthase [Paraprevotella xylaniphila YIT 11841]
 gi|329574049|gb|EGG55627.1| pseudouridylate synthase [Paraprevotella xylaniphila YIT 11841]
          Length = 253

 Score = 39.8 bits (92), Expect = 0.83,   Method: Composition-based stats.
 Identities = 11/71 (15%), Positives = 30/71 (42%), Gaps = 1/71 (1%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           +    + L   +  AG   S  EA   + +  + +N ++++    ++K  D        +
Sbjct: 13  DPDAPIRLNKFLANAGVC-SRREADEFITAGVVSVNGTVVTELGTKVKRSDEVKFHEQPV 71

Query: 405 SFGKKNHIICH 415
           S  +K +++ +
Sbjct: 72  SIERKVYVLLN 82


>gi|325478604|gb|EGC81716.1| tryptophan--tRNA ligase [Anaerococcus prevotii ACS-065-V-Col13]
          Length = 360

 Score = 39.8 bits (92), Expect = 0.83,   Method: Composition-based stats.
 Identities = 53/366 (14%), Positives = 101/366 (27%), Gaps = 67/366 (18%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSF----RDESRRMMRSQEI 99
            T   LH GH    +      +   +  +       +I D        D   ++   + +
Sbjct: 11  PTGR-LHLGHYVGSLK----NRVKMQNEASYEKMYVMIADSQALTDNFDNPGKI--RENL 63

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
            E       +          K    + +    L  + +   L  +              +
Sbjct: 64  VEVALDYLSVG-----LDPNKVTFFVQSQIPELTELTFY-FLNLVTLSRLERNPTVKSEI 117

Query: 160 RSR-LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQW------------GNI 206
           + R  +      FL   Y + QA D +     +D  +   G DQ              N 
Sbjct: 118 KLRNFENSLPAGFL--IYPVSQAADILL----FDANIIPVGEDQEPMIEQAREIARSFNN 171

Query: 207 ICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYW----- 261
           I G    E         +   +     G KM K+L  AI+L  +  +             
Sbjct: 172 IYGKTFVEPKAVLPEAKIARRMPGIDGGAKMSKSLGNAIYLADDKKTIKKKVMSMYTDPN 231

Query: 262 -RNIDD------ADVVSFAKRLT-------TLP----MSEIDRMAKLQGKEINEAKKIIA 303
             NIDD        V ++    +        LP    +  +    +  G    + KK + 
Sbjct: 232 HINIDDPGKVEGNIVFTYLDVFSKPEHFEKFLPDYENLDALKDHYRKGGLGDVKCKKFLI 291

Query: 304 ----TEITTMVHGREEAEKAA-TAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVK 358
                E+  +   R E EK          + +  ++ +    +S+ + + G+        
Sbjct: 292 KVLEEELEPIRQRRMEYEKDLSKVFKILEEGTAKARKVGEEKVSQVKKAMGINYFE---D 348

Query: 359 AGFATS 364
                S
Sbjct: 349 TDLIKS 354


>gi|262281651|ref|ZP_06059420.1| tryptophanyl-tRNA synthetase II [Streptococcus sp. 2_1_36FAA]
 gi|262262105|gb|EEY80802.1| tryptophanyl-tRNA synthetase II [Streptococcus sp. 2_1_36FAA]
          Length = 340

 Score = 39.8 bits (92), Expect = 0.83,   Method: Composition-based stats.
 Identities = 43/230 (18%), Positives = 66/230 (28%), Gaps = 42/230 (18%)

Query: 44  LTASSLHAGHLTQ-LMLLFWLQKTGHKPISLM----GGGTSIIGDPSFRDESRRMMRSQE 98
            T   LH GH    L     LQ  G   + +        T    DP              
Sbjct: 12  PTGK-LHIGHYVGSLRNRVLLQNEGKYDLFVFLADQQALTDHAKDPQ------------- 57

Query: 99  IQENIEKIKGIFSSFIK--YGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSF 156
               IE I  +   ++       K    + +    L  +    +     +    N  +  
Sbjct: 58  --TIIESIGNVALDYLAAGLDPEKVTIFIQSQIPELAELTMYYMNLVSLARLERNPTVKT 115

Query: 157 ESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL 216
           E  +    +     FL   Y I QA D      NY   + +G +DQ   I    ++    
Sbjct: 116 EIAQKGFGQSIPTGFL--VYPISQAADITAFKANY---VPVG-TDQKPMIEQTREIVRSF 169

Query: 217 KTPKL-FALTSP-----------LLTTASGT-KMGKTLSGAIWLNKEMTS 253
                   L  P            L    G  KM K+L+  I+L  +M +
Sbjct: 170 NNAYQKDVLVEPEGIYPENEAAGRLPGLDGNAKMSKSLNNGIYLADDMDT 219


>gi|257413823|ref|ZP_04744341.2| S4 RNA-binding domain protein [Roseburia intestinalis L1-82]
 gi|257202156|gb|EEV00441.1| S4 RNA-binding domain protein [Roseburia intestinalis L1-82]
          Length = 84

 Score = 39.8 bits (92), Expect = 0.83,   Method: Composition-based stats.
 Identities = 16/73 (21%), Positives = 25/73 (34%), Gaps = 19/73 (26%)

Query: 339 ISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
           I I   E    + L   + KAG   S  +A+  ++   +K+N                  
Sbjct: 15  IEIQIRETDEFIKLGQALKKAGLVESGVDAKFVIQDGLVKVNGE---------------- 58

Query: 399 TGNIKLSFGKKNH 411
               +L  GKK H
Sbjct: 59  ---TELQRGKKIH 68


>gi|218289628|ref|ZP_03493848.1| hemolysin A [Alicyclobacillus acidocaldarius LAA1]
 gi|218240278|gb|EED07461.1| hemolysin A [Alicyclobacillus acidocaldarius LAA1]
          Length = 279

 Score = 39.8 bits (92), Expect = 0.83,   Method: Composition-based stats.
 Identities = 7/40 (17%), Positives = 17/40 (42%)

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
           L+V  G  +S   ARR + +  ++++         ++   
Sbjct: 9   LLVARGLYSSREAARRAIMAGLVRVDGVRADKPGFKVAED 48


>gi|257065800|ref|YP_003152056.1| isoleucyl-tRNA synthetase [Anaerococcus prevotii DSM 20548]
 gi|256797680|gb|ACV28335.1| isoleucyl-tRNA synthetase [Anaerococcus prevotii DSM 20548]
          Length = 1037

 Score = 39.8 bits (92), Expect = 0.84,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 38/112 (33%), Gaps = 19/112 (16%)

Query: 169 LSFLEFNYMILQAYDFVELA-KNYDCRLQMGGSDQ---WGNIICGIDLGERLKTPKLFAL 224
           + F + +Y      DF E    ++ C     G DQ   W   +  I      K P    L
Sbjct: 528 MPFAQLHYPFEHKEDFEEYFPADFICE----GIDQTRGWFYSLMAISTITTGKAPYKNVL 583

Query: 225 TSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRL 276
            + L+   +G KM K+    +        P+  +  +     AD V F    
Sbjct: 584 VNDLVVDKNGQKMSKSKGNTL-------DPFALFDKY----GADAVRFYSLY 624


>gi|157363469|ref|YP_001470236.1| 30S ribosomal protein S4 [Thermotoga lettingae TMO]
 gi|172045985|sp|A8F4T8|RS4_THELT RecName: Full=30S ribosomal protein S4
 gi|157314073|gb|ABV33172.1| RNA-binding S4 domain protein [Thermotoga lettingae TMO]
          Length = 209

 Score = 39.8 bits (92), Expect = 0.84,   Method: Composition-based stats.
 Identities = 9/44 (20%), Positives = 17/44 (38%)

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
           + GFA S  +AR+ +      +N   I     +++  D      
Sbjct: 106 RLGFAISRRQARQLVTHGHFSVNGVKIDIPSYKLRPGDIVEVRE 149


>gi|147676683|ref|YP_001210898.1| 30S ribosomal protein S4 [Pelotomaculum thermopropionicum SI]
 gi|189045389|sp|A5D5E8|RS4_PELTS RecName: Full=30S ribosomal protein S4
 gi|146272780|dbj|BAF58529.1| ribosomal protein S4 and related proteins [Pelotomaculum
           thermopropionicum SI]
          Length = 208

 Score = 39.8 bits (92), Expect = 0.84,   Method: Composition-based stats.
 Identities = 10/45 (22%), Positives = 20/45 (44%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
            +I + G   S NEAR+ ++     +N   ++     +K  D  +
Sbjct: 102 NVIYRLGLGASRNEARQLVRHGHFTVNGRRVNIPSYLVKPGDVIA 146


>gi|114569169|ref|YP_755849.1| pseudouridine synthase, Rsu [Maricaulis maris MCS10]
 gi|114339631|gb|ABI64911.1| Pseudouridine synthase, Rsu [Maricaulis maris MCS10]
          Length = 372

 Score = 39.8 bits (92), Expect = 0.84,   Method: Composition-based stats.
 Identities = 8/58 (13%), Positives = 21/58 (36%), Gaps = 7/58 (12%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
           +   + +AG   S  E  R ++   +K++   +     ++   +           GK+
Sbjct: 11  IAKFLARAG-VASRREVERMIEGGRVKVDGKTLDTPAFKVTGSEHIEVD------GKR 61


>gi|23465185|ref|NP_695788.1| tryptophanyl-tRNA synthetase [Bifidobacterium longum NCC2705]
 gi|46190360|ref|ZP_00121601.2| COG0180: Tryptophanyl-tRNA synthetase [Bifidobacterium longum
           DJO10A]
 gi|189440255|ref|YP_001955336.1| tryptophanyl-tRNA synthetase [Bifidobacterium longum DJO10A]
 gi|227547449|ref|ZP_03977498.1| tryptophanyl-tRNA synthetase [Bifidobacterium longum subsp.
           infantis ATCC 55813]
 gi|239622799|ref|ZP_04665830.1| tryptophanyl-tRNA synthetase [Bifidobacterium longum subsp.
           infantis CCUG 52486]
 gi|291455736|ref|ZP_06595126.1| tryptophan--tRNA ligase [Bifidobacterium breve DSM 20213]
 gi|296453222|ref|YP_003660365.1| tryptophanyl-tRNA synthetase [Bifidobacterium longum subsp. longum
           JDM301]
 gi|312133589|ref|YP_004000928.1| trps [Bifidobacterium longum subsp. longum BBMN68]
 gi|317482406|ref|ZP_07941424.1| tryptophanyl-tRNA synthetase [Bifidobacterium sp. 12_1_47BFAA]
 gi|322688226|ref|YP_004207960.1| tryptophanyl-tRNA synthase [Bifidobacterium longum subsp. infantis
           157F]
 gi|322690239|ref|YP_004219809.1| tryptophanyl-tRNA synthase [Bifidobacterium longum subsp. longum
           JCM 1217]
 gi|23325809|gb|AAN24424.1| tryptophanyl-tRNA synthetase [Bifidobacterium longum NCC2705]
 gi|189428690|gb|ACD98838.1| Tryptophanyl-tRNA synthetase [Bifidobacterium longum DJO10A]
 gi|227212096|gb|EEI79992.1| tryptophanyl-tRNA synthetase [Bifidobacterium longum subsp.
           infantis ATCC 55813]
 gi|239514796|gb|EEQ54663.1| tryptophanyl-tRNA synthetase [Bifidobacterium longum subsp.
           infantis CCUG 52486]
 gi|291382664|gb|EFE90182.1| tryptophan--tRNA ligase [Bifidobacterium breve DSM 20213]
 gi|296182653|gb|ADG99534.1| tryptophanyl-tRNA synthetase [Bifidobacterium longum subsp. longum
           JDM301]
 gi|311772843|gb|ADQ02331.1| TrpS [Bifidobacterium longum subsp. longum BBMN68]
 gi|316916156|gb|EFV37560.1| tryptophanyl-tRNA synthetase [Bifidobacterium sp. 12_1_47BFAA]
 gi|320455095|dbj|BAJ65717.1| tryptophanyl-tRNA synthase [Bifidobacterium longum subsp. longum
           JCM 1217]
 gi|320459562|dbj|BAJ70182.1| tryptophanyl-tRNA synthase [Bifidobacterium longum subsp. infantis
           157F]
          Length = 363

 Score = 39.8 bits (92), Expect = 0.84,   Method: Composition-based stats.
 Identities = 34/256 (13%), Positives = 74/256 (28%), Gaps = 42/256 (16%)

Query: 22  SNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSI 80
           S+     +       T   G   T   LH GH    +     +Q+ G     ++      
Sbjct: 25  SDETLAKLEAKPSSFTMLTGDRPTGR-LHLGHYFGSIRERVAMQERGVNTNIIIADY--- 80

Query: 81  IGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKY----GTGKTDALMLNNETWLCSIK 136
                      +++  ++  E+I+    + +  + Y           +  ++     +  
Sbjct: 81  -----------QVITDRDTTEHIQ--DNVLNLVLDYMAAGIDPNKTMMFTHSAVPAENQL 127

Query: 137 YIDLLREIGSFFSVNRMLSFESVRSRLK-REQSLSFLEFNYMILQAYDFVELAKNYDCRL 195
            +  L  +             +V+S ++    +L+ L   Y + QA D   L    +   
Sbjct: 128 LLPFLSLVTEAELHRNP----TVKSEMEASGHALTGLLLTYPVHQACD--ILFCKANVV- 180

Query: 196 QMGGSDQWGNIICGIDLGERLKT----------PKLFALT-SPLLTTASGTKMGKTLSGA 244
              G D   ++     +  R                  L+ +P +    G KM K+   +
Sbjct: 181 -PIGKDNLPHVEITRTIARRFNERYAKKNPVFPEPAAILSEAPEIPGLDGRKMSKSYGNS 239

Query: 245 IWLNKEMTSPYNFWQY 260
           I L           + 
Sbjct: 240 IMLGATAEETAKLIKK 255


>gi|238926866|ref|ZP_04658626.1| hemolysin A [Selenomonas flueggei ATCC 43531]
 gi|238885398|gb|EEQ49036.1| hemolysin A [Selenomonas flueggei ATCC 43531]
          Length = 268

 Score = 39.8 bits (92), Expect = 0.85,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 27/63 (42%), Gaps = 10/63 (15%)

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIIS--------NEKLQIKLQDF--DSTGNIKL 404
           L+   G A S   A+R + +  + +N   +         +  L++  +D    S G +KL
Sbjct: 9   LLTVQGLAPSRERAKRLIMAGQVLVNEQRVDKAGATVPADAALRVAGEDLPYVSRGGLKL 68

Query: 405 SFG 407
           + G
Sbjct: 69  AKG 71


>gi|117620470|ref|YP_854575.1| tryptophanyl-tRNA synthetase II [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
 gi|117561877|gb|ABK38825.1| tryptophanyl-tRNA synthetase [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
          Length = 337

 Score = 39.8 bits (92), Expect = 0.85,   Method: Composition-based stats.
 Identities = 33/229 (14%), Positives = 70/229 (30%), Gaps = 31/229 (13%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
            T   LH GH    +      +  ++   ++    ++       D       ++     +
Sbjct: 12  PTGK-LHIGHYVGSLRQRVEAQHHYRQFVMIADLQAL------TDNGHNP--AKVTDHVL 62

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL 163
           E +    ++ +     KT   + +    L  +    L     +    N  +  E  +   
Sbjct: 63  EVMADYLAAGLD--PTKTTFCLQSALPALAELTTYYLNLVSVARLERNPTVKAEIQQKGF 120

Query: 164 KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK---TPK 220
           +R     FL   Y + QA D       +   + +G  DQ   +    ++  R       +
Sbjct: 121 ERSLPAGFL--IYPVSQAADITAFRATH---VPVG-EDQLPMLEQTNEIVRRFNTLVGKE 174

Query: 221 LFALTSPLL------TTASGT-KMGKTLSGAIWLN----KEMTSPYNFW 258
           +     P+L          G  KM K+L   I L     +   + +  +
Sbjct: 175 VLTECQPILSDTGRLPGIDGKAKMSKSLGNTIELGMSAEEIKQAVFAMY 223


>gi|83944323|ref|ZP_00956778.1| tryptophanyl-tRNA synthetase [Sulfitobacter sp. EE-36]
 gi|83844867|gb|EAP82749.1| tryptophanyl-tRNA synthetase [Sulfitobacter sp. EE-36]
          Length = 338

 Score = 39.8 bits (92), Expect = 0.85,   Method: Composition-based stats.
 Identities = 40/222 (18%), Positives = 68/222 (30%), Gaps = 43/222 (19%)

Query: 37  TAYIGYDLTASSLHAGHLTQLMLLFWL---QKTGHKPISLMGGGTSII--GDPSFRDESR 91
             + G   +   LH G+      L      Q  G + I  M    +I    DP+    S 
Sbjct: 9   RVFSGIQPSGD-LHLGNYLG--ALKRFADAQDKGVQSIYCMVDLHAITVWQDPADLKRST 65

Query: 92  RMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVN 151
           R + +  I   I+  K I  +  +       A + N                +     + 
Sbjct: 66  RELCAGFIASGIDPDKSILINQSQVPEHAQLAWVFN---------------CVARMGWMG 110

Query: 152 RMLS-FESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGI 210
           RM    +         ++ S   F Y  L A D +     +   + +G  DQ  ++    
Sbjct: 111 RMTQWKDKAGK---NAEAASLGLFAYPALMAADILIYHATH---VPVG-EDQKQHLELTR 163

Query: 211 DLGERLK---TPKLFALTSPLLTT--------ASG-TKMGKT 240
           D+  +         F LT P++            G  KM K+
Sbjct: 164 DIAAKFNHDYGVDFFPLTEPVIEGAATRVMSLRDGSKKMSKS 205


>gi|322411180|gb|EFY02088.1| hypothetical protein SDD27957_02020 [Streptococcus dysgalactiae
           subsp. dysgalactiae ATCC 27957]
          Length = 240

 Score = 39.8 bits (92), Expect = 0.85,   Method: Composition-based stats.
 Identities = 7/34 (20%), Positives = 15/34 (44%)

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
             S  +A   +K   + +N  +I++    +K  D
Sbjct: 12  VASRRKAEELIKQGLVTLNGQVITDSATTVKSGD 45


>gi|319787503|ref|YP_004146978.1| pseudouridine synthase [Pseudoxanthomonas suwonensis 11-1]
 gi|317466015|gb|ADV27747.1| pseudouridine synthase [Pseudoxanthomonas suwonensis 11-1]
          Length = 242

 Score = 39.8 bits (92), Expect = 0.85,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 22/63 (34%), Gaps = 7/63 (11%)

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD--FDSTGNIKLSF---GKKNHII 413
            GF  S  EA R +    + +N    +     +   D        +KL     GK+ H+ 
Sbjct: 15  TGFC-SRREADRLIAERRVTVNGQP-AGVGAVVGEGDEVRVDGQPLKLRAARPGKRRHVY 72

Query: 414 CHL 416
             L
Sbjct: 73  IAL 75


>gi|50294618|ref|XP_449720.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49529034|emb|CAG62696.1| unnamed protein product [Candida glabrata]
          Length = 337

 Score = 39.8 bits (92), Expect = 0.85,   Method: Composition-based stats.
 Identities = 47/254 (18%), Positives = 81/254 (31%), Gaps = 42/254 (16%)

Query: 44  LTASSLHAGHLTQLML----LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
            T    H G+          L  +++ G + I  +    + I  P       + +R + I
Sbjct: 4   PTGKF-HLGNYLGATRVWKDLCDIKQPGQRLIFGVADLHA-ITIPKPDAAQFKQLRREAI 61

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
              +        + I Y +       L    WL        L  +     +NRM  ++S 
Sbjct: 62  ASILAVGVDPARASIMYQSAIPAHSQLY---WL--------LSTVAPMGYLNRMTQWKS- 109

Query: 160 RSRLKREQSLSFLE--------FNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGID 211
           +S L+ ++  +  E        F Y +LQA D + L K     +   G DQ  ++     
Sbjct: 110 KSNLREDKDATAKELGEVKLGLFGYPVLQAADIL-LYKATHVPV---GDDQVQHLELTRT 165

Query: 212 LGERLKT---PKLFALTSPLL--------TTASGTKMGKTLSGAIWLNKEMTSPYNFWQY 260
           L E        ++F L   LL         T    KM K+      +      P    + 
Sbjct: 166 LAENFNKLYKKQVFPLPRTLLAPTKKILSLTHDTKKMSKSDPNQDGVIYVNDPPETIIRK 225

Query: 261 WRNI-DDADVVSFA 273
            +    D+    F 
Sbjct: 226 IKKARTDSITDKFY 239


>gi|90022211|ref|YP_528038.1| isoleucyl-tRNA synthetase [Saccharophagus degradans 2-40]
 gi|122996062|sp|Q21HK3|SYI_SACD2 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|89951811|gb|ABD81826.1| Isoleucyl-tRNA synthetase [Saccharophagus degradans 2-40]
          Length = 932

 Score = 39.8 bits (92), Expect = 0.85,   Method: Composition-based stats.
 Identities = 25/108 (23%), Positives = 34/108 (31%), Gaps = 18/108 (16%)

Query: 176 YMILQAYDFVELAKNYDCRLQMGGSDQ---WGNIICGIDLGERLKTPKLFALTSPLLTTA 232
           Y ++ A +       Y   L + GSDQ   W        +      P    LT      A
Sbjct: 541 YSVVNARE----NLRYPADLYLEGSDQHRGWFQSSLKTSMAINGSAPYKQVLTHGFTVDA 596

Query: 233 SGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLP 280
            G KM K++   +       SP    Q   N   ADV+      T   
Sbjct: 597 DGKKMSKSIGNTV-------SP----QKVMNDLGADVLRLWVAATDFS 633


>gi|115522955|ref|YP_779866.1| pseudouridine synthase Rsu [Rhodopseudomonas palustris BisA53]
 gi|115516902|gb|ABJ04886.1| Pseudouridine synthase, Rsu [Rhodopseudomonas palustris BisA53]
          Length = 787

 Score = 39.8 bits (92), Expect = 0.85,   Method: Composition-based stats.
 Identities = 10/50 (20%), Positives = 22/50 (44%), Gaps = 1/50 (2%)

Query: 348 RGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
            G  +  ++ +AG   S  +A   +    + +N  II++  L +  +D  
Sbjct: 465 AGERIAKVVSRAGLC-SRRDAEDWITEGRVAVNGRIINSPALDVTERDVI 513


>gi|332364156|gb|EGJ41933.1| tryptophan--tRNA ligase [Streptococcus sanguinis SK49]
          Length = 341

 Score = 39.8 bits (92), Expect = 0.86,   Method: Composition-based stats.
 Identities = 41/232 (17%), Positives = 64/232 (27%), Gaps = 48/232 (20%)

Query: 44  LTASSLHAGHLTQ-LMLLFWLQKTGHKPISLM----GGGTSIIGDPSFRDESRRMMRSQE 98
            T   LH GH    L     LQ  G   + +        T    DP              
Sbjct: 12  PTGK-LHIGHYVGSLRNRVLLQDQGKYEMFVFLADQQALTDHAKDPQ------------- 57

Query: 99  IQENIEKIKGIFSSFIK--YGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSF 156
             + +E I  +   ++       K    + +    L  +    +     +    N  +  
Sbjct: 58  --KIVESIGNVALDYLAAGLDPKKVTIFIQSQIPELAELSMYYMNLVSLARLERNPTVKT 115

Query: 157 ESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL 216
           E  +          FL   Y I QA D      N+   + +G  DQ   I    ++    
Sbjct: 116 EIAQKGFGESLPTGFL--VYPISQAADITAFKANF---VPVG-HDQKPMIEQTREIVRSF 169

Query: 217 KTPKLFALTSPL---------------LTTASGT-KMGKTLSGAIWLNKEMT 252
                   T  L               L    G  KM K+L+  I+L  +M 
Sbjct: 170 NHAYQ---TDVLVEPEGIYPENEAAGRLPGLDGNAKMSKSLNNGIYLADDMD 218


>gi|83591991|ref|YP_425743.1| pseudouridine synthase, Rsu [Rhodospirillum rubrum ATCC 11170]
 gi|83574905|gb|ABC21456.1| Pseudouridine synthase, Rsu [Rhodospirillum rubrum ATCC 11170]
          Length = 293

 Score = 39.8 bits (92), Expect = 0.86,   Method: Composition-based stats.
 Identities = 7/44 (15%), Positives = 17/44 (38%), Gaps = 1/44 (2%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           +  +I +AG   S  +A + +    + +N   +      +   D
Sbjct: 8   IAKVIARAGIC-SRRDAEKLIVEGRVTLNGRKVETPATLVAASD 50


>gi|330443971|ref|YP_004376957.1| tryptophanyl-tRNA synthetase [Chlamydophila pecorum E58]
 gi|328807081|gb|AEB41254.1| tryptophanyl-tRNA synthetase [Chlamydophila pecorum E58]
          Length = 347

 Score = 39.8 bits (92), Expect = 0.87,   Method: Composition-based stats.
 Identities = 38/220 (17%), Positives = 73/220 (33%), Gaps = 29/220 (13%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHK---PISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +    L+   H       ++          +   + R+    +E+ 
Sbjct: 13  PTGK-LHLGHWIGSIK-NRLELQNHPEYECFFIIADL------HTMTTKVRK----EEVL 60

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC-SIKYIDLLREIGSFFSVNRMLSFESV 159
           +    +  + + ++  G   T + +            ++     I     +      E  
Sbjct: 61  DVDNNVYEVLADWLSVGIDPTKSTIYLQSLIPEIYELHLLFSMLISINRVMGIPSLKEMA 120

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT- 218
           ++    E  LS+    Y +LQ+ D + LAK     +   G D   +I    D+       
Sbjct: 121 KNASIEEGGLSYGLIGYPVLQSADIL-LAKAQLVPV---GKDNEAHIELTRDIARNFNRL 176

Query: 219 -----PKLFALTSPL--LTTASGT-KMGKTLSGAIWLNKE 250
                P+   L   L  L    G  KM K+ + AI+L+ +
Sbjct: 177 YGEIFPEPEVLQGELTSLVGIDGQGKMSKSANNAIYLSDD 216


>gi|300857808|ref|YP_003782791.1| 30S ribosomal protein S4 [Corynebacterium pseudotuberculosis FRC41]
 gi|300685262|gb|ADK28184.1| 30S ribosomal protein S4 [Corynebacterium pseudotuberculosis FRC41]
 gi|302205543|gb|ADL09885.1| 30S ribosomal protein S4 [Corynebacterium pseudotuberculosis C231]
 gi|302330098|gb|ADL20292.1| 30S ribosomal protein S4 [Corynebacterium pseudotuberculosis 1002]
 gi|308275779|gb|ADO25678.1| 30S ribosomal protein S4 [Corynebacterium pseudotuberculosis I19]
          Length = 201

 Score = 39.8 bits (92), Expect = 0.87,   Method: Composition-based stats.
 Identities = 13/104 (12%), Positives = 29/104 (27%), Gaps = 10/104 (9%)

Query: 308 TMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSR--GMGLLTLIVK------- 358
             +   E   +        F   +  +         + +    G  L+ L+         
Sbjct: 39  ARIKESEYLLQLQEKQKARFTYGVMEKQFRRYYAEANRLPGKTGDNLVILLEARLDNVVY 98

Query: 359 -AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
            AG A +  +AR+ +      +N   I+    ++   D      
Sbjct: 99  RAGLARTRRQARQLVSHGHFTVNGKKINVPSYKVSQYDIIDVRE 142


>gi|16331005|ref|NP_441733.1| hypothetical protein slr0950 [Synechocystis sp. PCC 6803]
 gi|1653500|dbj|BAA18413.1| slr0950 [Synechocystis sp. PCC 6803]
          Length = 274

 Score = 39.8 bits (92), Expect = 0.87,   Method: Composition-based stats.
 Identities = 8/40 (20%), Positives = 19/40 (47%)

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
           L+V  G   S   A+R +++  +K+N  ++      + + 
Sbjct: 12  LLVAKGLCESRALAQRLIRAGEVKVNQQLVDKPGTLVTMD 51


>gi|85717175|ref|ZP_01048133.1| pseudouridine synthase, Rsu [Nitrobacter sp. Nb-311A]
 gi|85696008|gb|EAQ33908.1| pseudouridine synthase, Rsu [Nitrobacter sp. Nb-311A]
          Length = 635

 Score = 39.8 bits (92), Expect = 0.87,   Method: Composition-based stats.
 Identities = 11/51 (21%), Positives = 23/51 (45%), Gaps = 1/51 (1%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
             G  +  +I +AG A S  +A   +    + +N  +I++  L +  +D  
Sbjct: 306 KAGERVAKVISRAGLA-SRRDAEEWVTQGRVAVNGRVINSPALDVTSRDVI 355


>gi|329962292|ref|ZP_08300298.1| ribosomal protein S4 [Bacteroides fluxus YIT 12057]
 gi|328530400|gb|EGF57277.1| ribosomal protein S4 [Bacteroides fluxus YIT 12057]
          Length = 201

 Score = 39.8 bits (92), Expect = 0.88,   Method: Composition-based stats.
 Identities = 10/82 (12%), Positives = 28/82 (34%), Gaps = 3/82 (3%)

Query: 320 ATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKI 379
                  F+ +  ++ + T  I    +   +    ++ + G A +   AR+ +    I +
Sbjct: 65  EKQFRNLFEKAETAKGI-TGEILLQLLEGRLD--NIVFRLGIAPTRAAARQLVSHKHITV 121

Query: 380 NNSIISNEKLQIKLQDFDSTGN 401
           N  +++     +K         
Sbjct: 122 NGEVVNVPSYAVKPGQVIGVRE 143


>gi|302682412|ref|XP_003030887.1| hypothetical protein SCHCODRAFT_56595 [Schizophyllum commune H4-8]
 gi|300104579|gb|EFI95984.1| hypothetical protein SCHCODRAFT_56595 [Schizophyllum commune H4-8]
          Length = 396

 Score = 39.8 bits (92), Expect = 0.88,   Method: Composition-based stats.
 Identities = 35/237 (14%), Positives = 75/237 (31%), Gaps = 13/237 (5%)

Query: 11  ILSERGFIHQISNPRELDILCSQGVV-TAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
            L  R    ++  P  +  + ++G     Y G   T    H  +   L  +      G +
Sbjct: 11  ELITRDL-QEVLGPDIIKNILAEGRTPKCYWGTACTGRP-HIAYFVPLTKIADFLHAGVE 68

Query: 70  PISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSS-FIKYGTGKTDALMLNN 128
               +   +    D     ++ +    + +++  +  + +  + F   G   +   ++  
Sbjct: 69  VTKPLLRFSCPFLDVHAFLDNLKA-PIELVEQRCKYYRFVLMAVFETLGIPTSKLRIVEG 127

Query: 129 ETW-LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
            ++ L     +D  R        +   +   V  +++           Y  LQA D   L
Sbjct: 128 SSYQLTKEYNMDNYRLCAIVTEHDAKKAGAEVVKQVESPL---LSGLLYPGLQALDEQYL 184

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGA 244
                C  Q GG DQ            +L   K   L + ++   +G KM  +   +
Sbjct: 185 ----GCDFQFGGVDQRKIFTFAEAYLPKLGYAKRAHLMNAMVPGLAGGKMSASDPNS 237


>gi|258511739|ref|YP_003185173.1| hemolysin A [Alicyclobacillus acidocaldarius subsp. acidocaldarius
           DSM 446]
 gi|257478465|gb|ACV58784.1| hemolysin A [Alicyclobacillus acidocaldarius subsp. acidocaldarius
           DSM 446]
          Length = 279

 Score = 39.8 bits (92), Expect = 0.88,   Method: Composition-based stats.
 Identities = 7/40 (17%), Positives = 16/40 (40%)

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
           L+V  G   S   ARR + +  ++++         ++   
Sbjct: 9   LLVARGLYASREAARRAIMAGLVRVDGVRADKPGFKVAED 48


>gi|154247023|ref|YP_001417981.1| RNA-binding S4 domain-containing protein [Xanthobacter
           autotrophicus Py2]
 gi|154161108|gb|ABS68324.1| RNA-binding S4 domain protein [Xanthobacter autotrophicus Py2]
          Length = 620

 Score = 39.8 bits (92), Expect = 0.88,   Method: Composition-based stats.
 Identities = 6/58 (10%), Positives = 23/58 (39%), Gaps = 1/58 (1%)

Query: 340 SISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
            ++         +  ++ +AG   S  E    +++  + +N  +++   + +  +D  
Sbjct: 20  ELTPAAPKEAERIAKVVARAGL-GSRREIEEWIEAGRVAVNGEVLTTPAVTVTAEDAI 76


>gi|147677969|ref|YP_001212184.1| 16S rRNA uridine-516 pseudouridylate synthase and related
           pseudouridylate synthase [Pelotomaculum
           thermopropionicum SI]
 gi|146274066|dbj|BAF59815.1| 16S rRNA uridine-516 pseudouridylate synthase and related
           pseudouridylate synthase [Pelotomaculum
           thermopropionicum SI]
          Length = 252

 Score = 39.8 bits (92), Expect = 0.88,   Method: Composition-based stats.
 Identities = 13/64 (20%), Positives = 28/64 (43%), Gaps = 2/64 (3%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ-DFDSTGNIKLSFGKKN 410
           L  ++ +AG   S     R + + A+K+N  +++    ++    D    GN  +S   + 
Sbjct: 16  LQKVMARAG-VASRRHCERLIAAGAVKVNGKVVTEVGCKVDPARDKIQVGNRTISLFPRR 74

Query: 411 HIIC 414
           + I 
Sbjct: 75  YYIL 78


>gi|83635470|gb|ABC31437.1| tryptophanyl-tRNA synthetase-related protein [Hahella chejuensis
           KCTC 2396]
          Length = 391

 Score = 39.8 bits (92), Expect = 0.88,   Method: Composition-based stats.
 Identities = 25/142 (17%), Positives = 46/142 (32%), Gaps = 34/142 (23%)

Query: 133 CSIKYIDLLREIGSFFS----------------VNRMLSF-----ESVRSRLKREQSLSF 171
             + +I++ RE+   F+                + RM        ES+R R   +     
Sbjct: 143 DQVSHIEMTREVARRFNHLYGREPGFEEQAEAAIKRMGKKTAKLYESLRKRYLEQGDGEA 202

Query: 172 LEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPL-LT 230
           LE    +L+    + L          G  ++    + G   G+ +       LT    + 
Sbjct: 203 LETARALLRDQQNISL----------GDRERLYGFLEGG--GKVILPEPQVLLTPEAKMP 250

Query: 231 TASGTKMGKTLSGAIWLNKEMT 252
              G KM K+    I L ++  
Sbjct: 251 GLDGQKMSKSYGNTIGLREDAD 272


>gi|326332226|ref|ZP_08198506.1| ribosomal protein S4 [Nocardioidaceae bacterium Broad-1]
 gi|325949932|gb|EGD41992.1| ribosomal protein S4 [Nocardioidaceae bacterium Broad-1]
          Length = 202

 Score = 39.8 bits (92), Expect = 0.89,   Method: Composition-based stats.
 Identities = 18/107 (16%), Positives = 34/107 (31%), Gaps = 16/107 (14%)

Query: 311 HGR------EEAEKAATAAMECFDMSIHSQHMPTI--SISKDEVSRGMGLLTLI------ 356
           HGR      E   +        F   +  +   +      + +   G  LL L+      
Sbjct: 36  HGRGRIKESEYLLQLREKQKARFTYGVMEKQFASYYAEAHRRDGKTGDNLLQLLEGRLDN 95

Query: 357 --VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
              +AGFA +  +AR+ +      +N   ++    Q+   D      
Sbjct: 96  VVYRAGFARTRRQARQLVVHGHFLVNGKKVNVPSFQVSAHDVIDVRE 142


>gi|310643846|ref|YP_003948604.1| tryptophan-tRNA ligase (tryptophanyl-tRNA synthetase)
           [Paenibacillus polymyxa SC2]
 gi|309248796|gb|ADO58363.1| Tryptophan-tRNA ligase (Tryptophanyl-tRNA synthetase)
           [Paenibacillus polymyxa SC2]
          Length = 329

 Score = 39.8 bits (92), Expect = 0.89,   Method: Composition-based stats.
 Identities = 43/297 (14%), Positives = 89/297 (29%), Gaps = 50/297 (16%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   +   L  G+    M  F   +  H+   ++    + I  P    + R    S+ + 
Sbjct: 7   GIQPSGQ-LTLGNYIGAMKNFVKLQEDHQCYFMVPDLHA-ITVPQEPAQLREQ--SEAVA 62

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
                          +                  + ++  +  + +   + RM      +
Sbjct: 63  ALFIAAGINPEKSNVFLQSHVPQH--------AELGWL--MTTLTNMGELERMTQ---FK 109

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            +   + S+    F Y  L A D +     Y+  L   G DQ  ++    DL  R     
Sbjct: 110 DKSAGKDSVGAGLFVYPSLMAADILL----YNADLVPVGDDQKQHLELTRDLAGRFNHRY 165

Query: 221 LFALTSP----------LLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYW-RNIDD-- 266
               T P          +++      KM K+   A      +  P    +   R   D  
Sbjct: 166 GDYFTVPEPYIPEVGARIMSLDDASKKMSKSNPNAGSFIALLDDPKVIRKKISRATTDSG 225

Query: 267 -------------ADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMV 310
                        ++++S   + + L + E+    + +G+     KK +A  +  M+
Sbjct: 226 SEVKYDPANKPEISNLMSIYSQCSGLSLQEV--QDRYEGQMYGTFKKELAETVVAML 280


>gi|289551183|ref|YP_003472087.1| Proteobacterial type tryptophanyl-tRNA synthetase [Staphylococcus
           lugdunensis HKU09-01]
 gi|315658685|ref|ZP_07911555.1| tryptophan--tRNA ligase [Staphylococcus lugdunensis M23590]
 gi|289180715|gb|ADC87960.1| Proteobacterial type tryptophanyl-tRNA synthetase [Staphylococcus
           lugdunensis HKU09-01]
 gi|315496316|gb|EFU84641.1| tryptophan--tRNA ligase [Staphylococcus lugdunensis M23590]
          Length = 329

 Score = 39.8 bits (92), Expect = 0.89,   Method: Composition-based stats.
 Identities = 36/199 (18%), Positives = 68/199 (34%), Gaps = 37/199 (18%)

Query: 140 LLREIGSFFSVNRMLS-FESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMG 198
           +L  I S   + RM    +  + R      +      Y  L A D V     Y+  +   
Sbjct: 92  MLTTIASVGELERMTQYKDKAQKR---TDGIPAGLLTYPPLMAADIVL----YNTNIVPV 144

Query: 199 GSDQWGNIICGIDLGERLKTPKLFALTSPLL--TTASG---------TKMGKTLSGAIWL 247
           G DQ  ++    +L ER  +     LT P +      G          KM K+       
Sbjct: 145 GEDQKQHMELTRNLVERFNSRYNDVLTKPEIRMPKIGGRVMSLQEPTKKMSKSDDNQKNF 204

Query: 248 NKEMTSPYNFWQYWRN-IDDAD---------------VVSFAKRLTTLPMSEIDRMAKLQ 291
              +  P+   +  ++ + D+D               ++S    LT   + +I++  K +
Sbjct: 205 ISLLDEPHIAAKKIKSAVTDSDGIIKFDRDNKPGISNLLSIYSSLTDESIQDIEQ--KYE 262

Query: 292 GKEINEAKKIIATEITTMV 310
           G+   + K  +A  +   +
Sbjct: 263 GEGYGKLKSDLAEIVKDFL 281


>gi|160881602|ref|YP_001560570.1| tryptophanyl-tRNA synthetase [Clostridium phytofermentans ISDg]
 gi|160430268|gb|ABX43831.1| tryptophanyl-tRNA synthetase [Clostridium phytofermentans ISDg]
          Length = 331

 Score = 39.8 bits (92), Expect = 0.89,   Method: Composition-based stats.
 Identities = 47/310 (15%), Positives = 89/310 (28%), Gaps = 53/310 (17%)

Query: 43  DLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN 102
           D T   LH GH    +      +  +    L+    ++          R  + +  I + 
Sbjct: 12  DRTTGKLHLGHYVGSLSQRVELQDEYDTFILLADIQALTTHF-----ERPELINASIYDV 66

Query: 103 IEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR 162
                   S  +          +             +L      F SVN +    +++  
Sbjct: 67  A---MDNLSVGLD----PNKVTIFQQSQIKA---IAELTIFYSMFVSVNVLRHNPTIK-- 114

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNY-DCRLQMGGSDQWGNIICGIDLGERLKT--- 218
                +  + +  Y  L           + +  L   G DQ  ++     +  R      
Sbjct: 115 -TEAANYGYEDLTYGFLGYPVSQSADITFCNADLVPVGEDQLPHMEMTRKIVRRFNDLYG 173

Query: 219 -----PKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRN-IDDAD--- 268
                PK    +   L    G  KMGK+L  AI+L+ +  +        RN + D +   
Sbjct: 174 ETLHEPKAKLSSCSRLVGLDGNAKMGKSLGNAIYLSDDAKTVSE---KVRNAVTDPNRIT 230

Query: 269 -----------VVSFAKRLTTLPMSEIDRMAKLQGKEIN--EAKKIIATEITTM---VHG 312
                      V ++ K     P    D   + +   I     KK +A ++  +      
Sbjct: 231 LKDPGNPEICVVQAYHKVFN--PTEHEDVCNRCRTATIGCVACKKRLAEKLNELLDPFRD 288

Query: 313 REEAEKAATA 322
           R    +A  +
Sbjct: 289 RRAYYEAHRS 298


>gi|289450333|ref|YP_003474947.1| tryptophan--tRNA ligase [Clostridiales genomosp. BVAB3 str.
           UPII9-5]
 gi|289184880|gb|ADC91305.1| tryptophan--tRNA ligase [Clostridiales genomosp. BVAB3 str.
           UPII9-5]
          Length = 332

 Score = 39.8 bits (92), Expect = 0.90,   Method: Composition-based stats.
 Identities = 35/238 (14%), Positives = 67/238 (28%), Gaps = 43/238 (18%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESR--RMMRSQEIQE 101
            T   LH GH    +      +  +    +M      I D     ++     +    + E
Sbjct: 11  PTG-HLHIGHYVGSLRNRVAIQDKYDQTYVM------IADLQALSDNGDNPELIRNNLLE 63

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRM-----LSF 156
                             K    + +        +  + L    ++ ++ R+     +  
Sbjct: 64  VAYDYYAAG-----IDPSKNTIFVQS-----MIPELTEFLNFYLNYVTLARLKRNPTVKA 113

Query: 157 ESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL 216
           E  +   K +    FL   Y + QA D       ++  L   G DQ   I    ++   +
Sbjct: 114 EMKQKNFKEDVPAGFL--VYPVSQAADITA----FNATLVPVGEDQLPMIEQTNEIVRYV 167

Query: 217 KTP---------KLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNI 264
                       K        L    G  KM K+L   ++L+ E        Q   ++
Sbjct: 168 HNHFSEDVLVECKAVLSEVGRLPGIDGNAKMSKSLGNCLYLSDEADV---IKQKVMSM 222


>gi|167523649|ref|XP_001746161.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163775432|gb|EDQ89056.1| predicted protein [Monosiga brevicollis MX1]
          Length = 530

 Score = 39.8 bits (92), Expect = 0.90,   Method: Composition-based stats.
 Identities = 21/119 (17%), Positives = 41/119 (34%), Gaps = 5/119 (4%)

Query: 24  PRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGD 83
            R LD+      +  Y G   ++ ++H GHL   M   +LQ     P+ +      +  D
Sbjct: 203 DRILDLKEQGKPIYLYTGRGPSSQAMHLGHLIPFMFTKYLQDVFDVPLVI-----QMTDD 257

Query: 84  PSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLR 142
             F  +S   +    +       +      I  G  +    +  +   +    Y ++LR
Sbjct: 258 EKFLFKSELTLDEDPVTGVFALTRENAKDIIACGFNREKTYIFADTDIMGGAFYKNVLR 316


>gi|168015016|ref|XP_001760047.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162688797|gb|EDQ75172.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 276

 Score = 39.8 bits (92), Expect = 0.90,   Method: Composition-based stats.
 Identities = 15/71 (21%), Positives = 28/71 (39%), Gaps = 6/71 (8%)

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS-TGNIKLSFG---- 407
           +  +  AGF  S ++    + S  +++N   ++   L +K  D  S  G  ++  G    
Sbjct: 203 VDALTSAGFRMSRSKLAELISSGEVRVNWKEVTKTSLTLKTGDVVSVRGKGRIQVGEIVM 262

Query: 408 -KKNHIICHLC 417
            KK      L 
Sbjct: 263 TKKGRYAVELT 273


>gi|315103786|gb|EFT75762.1| conserved hypothetical protein [Propionibacterium acnes HL050PA2]
          Length = 245

 Score = 39.8 bits (92), Expect = 0.90,   Method: Composition-based stats.
 Identities = 9/48 (18%), Positives = 24/48 (50%), Gaps = 1/48 (2%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
            +G+ L  ++ +AG A S   A   + +  +++N  +I  +  ++  +
Sbjct: 4   EQGIRLQKVLAQAGLA-SRRAAEDMIAAGRVEVNGELIVEQGRRVDPE 50


>gi|307941691|ref|ZP_07657046.1| ribosomal large subunit pseudouridine synthase B [Roseibium sp.
           TrichSKD4]
 gi|307775299|gb|EFO34505.1| ribosomal large subunit pseudouridine synthase B [Roseibium sp.
           TrichSKD4]
          Length = 380

 Score = 39.8 bits (92), Expect = 0.90,   Method: Composition-based stats.
 Identities = 8/48 (16%), Positives = 21/48 (43%), Gaps = 1/48 (2%)

Query: 348 RGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
            G  +  ++ +AG   S  EA   + +  +++N   +    + +  +D
Sbjct: 14  EGERIAKVMARAGLC-SRREAETWIAAGRVEVNGKKLDTPAITVGAKD 60


>gi|294054852|ref|YP_003548510.1| pseudouridine synthase [Coraliomargarita akajimensis DSM 45221]
 gi|293614185|gb|ADE54340.1| pseudouridine synthase [Coraliomargarita akajimensis DSM 45221]
          Length = 243

 Score = 39.8 bits (92), Expect = 0.90,   Method: Composition-based stats.
 Identities = 13/57 (22%), Positives = 24/57 (42%), Gaps = 4/57 (7%)

Query: 348 RGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIIS--NEKLQIKLQDFDSTGNI 402
               +  LI  AG   S  EA R ++   +++N   I+   +K +I    F +   +
Sbjct: 5   EKQRIQKLIANAGLC-SRREAERLIEDGKVRVNG-KIAQLGDKARISDDIFVNNKPL 59


>gi|260426509|ref|ZP_05780488.1| lysyl-tRNA synthetase [Citreicella sp. SE45]
 gi|260421001|gb|EEX14252.1| lysyl-tRNA synthetase [Citreicella sp. SE45]
          Length = 525

 Score = 39.8 bits (92), Expect = 0.90,   Method: Composition-based stats.
 Identities = 29/184 (15%), Positives = 57/184 (30%), Gaps = 20/184 (10%)

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            DF           +M G D   N      +   L        T  L     G K+ K+ 
Sbjct: 236 PDFGARWAALGVDFEMYGKDHSTNTPIYDGICRTLGVRAPEHFTYELFLDDQGQKISKSK 295

Query: 242 SGAIWLNKEMT------SPYNFWQY-------WRNIDDADVVSFAKRLTTLPMSEIDRMA 288
              + +++ +T        Y  +Q        W ++    V  + ++L   P  ++    
Sbjct: 296 GNGLSIDEWLTYASTESLSYFMFQKPKTAKRLWWDVIPKAVDEYHQQLRAFPDQDVKAQL 355

Query: 289 -----KLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISK 343
                 + G ++ E+K ++   +   +     AE     AM  F      +  P      
Sbjct: 356 ANPVWHIHGGDVPESKMVVPFSMLLNLASAAGAED--KDAMWGFIRRYAPEASPASHPDM 413

Query: 344 DEVS 347
           D+ +
Sbjct: 414 DDAA 417


>gi|254464524|ref|ZP_05077935.1| lysyl-tRNA synthetase [Rhodobacterales bacterium Y4I]
 gi|206685432|gb|EDZ45914.1| lysyl-tRNA synthetase [Rhodobacterales bacterium Y4I]
          Length = 563

 Score = 39.8 bits (92), Expect = 0.90,   Method: Composition-based stats.
 Identities = 16/85 (18%), Positives = 28/85 (32%), Gaps = 6/85 (7%)

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            DF       +   +M G D   N      +   L  P     T  L    +G K+ K+ 
Sbjct: 252 PDFGARWAALEVDFEMYGKDHSTNTPIYDGICRVLGVPAPEHFTYELFLDENGQKISKSS 311

Query: 242 SGAIWLNKEMT------SPYNFWQY 260
              + +++ +T        Y  +Q 
Sbjct: 312 GNGVSIDEWLTYASTESLAYFMYQK 336


>gi|119496387|ref|XP_001264967.1| 30S ribosomal subunit S4, putative [Neosartorya fischeri NRRL 181]
 gi|119413129|gb|EAW23070.1| 30S ribosomal subunit S4, putative [Neosartorya fischeri NRRL 181]
          Length = 469

 Score = 39.8 bits (92), Expect = 0.90,   Method: Composition-based stats.
 Identities = 16/86 (18%), Positives = 33/86 (38%), Gaps = 6/86 (6%)

Query: 315 EAEKAATAAMECFDMSIHSQH----MPTISISKDEVSRGMGLLTLIVKAGFATSTNEARR 370
               A   +    D +  +Q      P   ++   + R + +   I +A FA+ST +AR+
Sbjct: 92  AGRGAGLESEANGDGTAGAQDQTSLTPYTQMTFAPLERRLDVA--IFRAMFASSTRQARQ 149

Query: 371 HLKSNAIKINNSIISNEKLQIKLQDF 396
            +   A+ +N   +      +   D 
Sbjct: 150 FVVHGAVTVNGKKMRYPGYLLNPGDL 175


>gi|110597340|ref|ZP_01385628.1| tryptophanyl-tRNA synthetase [Chlorobium ferrooxidans DSM 13031]
 gi|110341176|gb|EAT59644.1| tryptophanyl-tRNA synthetase [Chlorobium ferrooxidans DSM 13031]
          Length = 344

 Score = 39.8 bits (92), Expect = 0.90,   Method: Composition-based stats.
 Identities = 24/110 (21%), Positives = 39/110 (35%), Gaps = 21/110 (19%)

Query: 167 QSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTS 226
           +SL++    Y +LQA D + L K     +   G DQ  ++    ++  R        +  
Sbjct: 128 ESLTYGHLGYPVLQAADIL-LYKGNVVPV---GEDQLPHVEITREIARRFNNLYQHPILG 183

Query: 227 PL-------------LTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWR 262
            +             L    G  KM K+L   I L+    SP    +  R
Sbjct: 184 EVFPEPAPKITKFSRLPGLDGKAKMSKSLGNTILLS---DSPDEIAKKMR 230


>gi|313680897|ref|YP_004058636.1| ribosomal large subunit pseudouridine synthase b [Oceanithermus
           profundus DSM 14977]
 gi|313153612|gb|ADR37463.1| ribosomal large subunit pseudouridine synthase B [Oceanithermus
           profundus DSM 14977]
          Length = 252

 Score = 39.8 bits (92), Expect = 0.91,   Method: Composition-based stats.
 Identities = 9/37 (24%), Positives = 20/37 (54%)

Query: 348 RGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSII 384
            G+ L   +V AG A S  +A   +++  + +N +++
Sbjct: 5   DGIRLQKYLVLAGAAPSRRKAEDLIRAGRVSVNGAVV 41


>gi|269127043|ref|YP_003300413.1| pseudouridine synthase [Thermomonospora curvata DSM 43183]
 gi|268312001|gb|ACY98375.1| pseudouridine synthase [Thermomonospora curvata DSM 43183]
          Length = 250

 Score = 39.8 bits (92), Expect = 0.91,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 20/42 (47%), Gaps = 1/42 (2%)

Query: 344 DEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIIS 385
            E   G+ L  ++ +AG   S  +  R +    +K++  ++S
Sbjct: 8   AEHKEGVRLQKVLAEAGL-GSRRQCERLIVEGRVKVDGEVVS 48


>gi|169826795|ref|YP_001696953.1| tryptophanyl-tRNA synthetase [Lysinibacillus sphaericus C3-41]
 gi|168991283|gb|ACA38823.1| Tryptophanyl-tRNA synthetase [Lysinibacillus sphaericus C3-41]
          Length = 329

 Score = 39.8 bits (92), Expect = 0.91,   Method: Composition-based stats.
 Identities = 44/248 (17%), Positives = 78/248 (31%), Gaps = 37/248 (14%)

Query: 35  VVTAYIGYDLTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGG-GTSIIGDPSFRDESRR 92
           + T + G   T   +  G+       F  LQ  G     ++     ++  DP    E R 
Sbjct: 1   MTTIFSGVQPTGI-VTLGNYLGAFKQFPALQDEGDAIYCIVDQHAITVAQDP---KELRE 56

Query: 93  MMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNR 152
            +R          I    S+          A       W        +L+ + S   + R
Sbjct: 57  SIRKLAATYIATGIDPKKSTLFIQSEVPAHAQ----AGW--------MLQCVASIGELER 104

Query: 153 MLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL 212
           M      + +   ++S+S     Y  L A D +     Y+  +   G DQ  +I    DL
Sbjct: 105 MTQ---FKDKSHGKESVSAALLTYPPLMAADILL----YNTNIVPVGDDQKQHIELTRDL 157

Query: 213 GERLKTPKLFALTSPLLTTASG-----------TKMGKTLSGAIWLNKEMTSPYNFWQYW 261
            ER        LT P +                 KM K+        + + +  +  +  
Sbjct: 158 AERFNKRYGNVLTIPEIQLPKAGARIKSLQEPTKKMSKSDPNTKATIRLLDTAKDIEKKI 217

Query: 262 RN-IDDAD 268
           ++ + D+D
Sbjct: 218 KSAVTDSD 225


>gi|83953365|ref|ZP_00962087.1| tryptophanyl-tRNA synthetase [Sulfitobacter sp. NAS-14.1]
 gi|83842333|gb|EAP81501.1| tryptophanyl-tRNA synthetase [Sulfitobacter sp. NAS-14.1]
          Length = 338

 Score = 39.8 bits (92), Expect = 0.91,   Method: Composition-based stats.
 Identities = 40/222 (18%), Positives = 68/222 (30%), Gaps = 43/222 (19%)

Query: 37  TAYIGYDLTASSLHAGHLTQLMLLFWL---QKTGHKPISLMGGGTSII--GDPSFRDESR 91
             + G   +   LH G+      L      Q  G + I  M    +I    DP+    S 
Sbjct: 9   RVFSGIQPSGD-LHLGNYLG--ALKRFADAQDKGVQSIYCMVDLHAITVWQDPADLKRST 65

Query: 92  RMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVN 151
           R + +  I   I+  K I  +  +       A + N                +     + 
Sbjct: 66  RELCAGFIASGIDPDKSILINQSQVPEHAQLAWVFN---------------CVARMGWMG 110

Query: 152 RMLS-FESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGI 210
           RM    +         ++ S   F Y  L A D +     +   + +G  DQ  ++    
Sbjct: 111 RMTQWKDKAGK---NAEAASLGLFAYPALMAADILIYHATH---VPVG-EDQKQHLELTR 163

Query: 211 DLGERLK---TPKLFALTSPLLTT--------ASG-TKMGKT 240
           D+  +         F LT P++            G  KM K+
Sbjct: 164 DIAAKFNHDYGVDFFPLTEPVIEGAATRVMSLRDGSKKMSKS 205


>gi|325002515|ref|ZP_08123627.1| ribosomal large subunit pseudouridine synthase B [Pseudonocardia
           sp. P1]
          Length = 253

 Score = 39.8 bits (92), Expect = 0.92,   Method: Composition-based stats.
 Identities = 8/54 (14%), Positives = 21/54 (38%), Gaps = 1/54 (1%)

Query: 341 ISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
           +S      G+ L  ++ +AG   S   A   +    ++++   +     +I  +
Sbjct: 1   MSTAHDPDGVRLQKVLARAG-VASRRAAEELIAQGRVQVDGETVREMGRRIDPE 53


>gi|241206829|ref|YP_002977925.1| RNA-binding S4 domain protein [Rhizobium leguminosarum bv. trifolii
           WSM1325]
 gi|240860719|gb|ACS58386.1| RNA-binding S4 domain protein [Rhizobium leguminosarum bv. trifolii
           WSM1325]
          Length = 134

 Score = 39.8 bits (92), Expect = 0.92,   Method: Composition-based stats.
 Identities = 14/71 (19%), Positives = 26/71 (36%), Gaps = 12/71 (16%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF----DSTGNIKLSFG 407
           +   +  A  A S + A+ H++S  ++IN    S     +K  D         ++ L   
Sbjct: 15  IDKWLFFARMAKSRSVAQSHIQSGHVRINGERCSQPSQMVKPGDRIELTLERRDVVL--- 71

Query: 408 KKNHIICHLCG 418
                +  L G
Sbjct: 72  -----VVRLAG 77


>gi|118475394|ref|YP_892916.1| pseudouridine synthase, Rsu:RNA-binding S4:pseudouridine synthase
           [Campylobacter fetus subsp. fetus 82-40]
 gi|118414620|gb|ABK83040.1| pseudouridine synthase, Rsu:RNA-binding S4:Pseudouridine synthase
           [Campylobacter fetus subsp. fetus 82-40]
          Length = 254

 Score = 39.8 bits (92), Expect = 0.92,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 20/51 (39%), Gaps = 1/51 (1%)

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           S  EA   +K+  + INN +I N    +K  D        +   KK   I 
Sbjct: 14  SRREADELVKNGKVSINNKVIDNLATDVKEDDKIKINGRFIRL-KKEFSII 63


>gi|84687927|ref|ZP_01015793.1| lysyl-tRNA synthetase [Maritimibacter alkaliphilus HTCC2654]
 gi|84664064|gb|EAQ10562.1| lysyl-tRNA synthetase [Rhodobacterales bacterium HTCC2654]
          Length = 525

 Score = 39.8 bits (92), Expect = 0.92,   Method: Composition-based stats.
 Identities = 15/85 (17%), Positives = 25/85 (29%), Gaps = 6/85 (7%)

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            DF           +M G D   N      +   L        T  L     G K+ K+ 
Sbjct: 236 PDFGARWAALGVDFEMYGKDHSSNTPIYDGICRALGGRAPEHFTYELFLDDKGEKISKSK 295

Query: 242 SGAIWLNKEMT------SPYNFWQY 260
              + +++ +T        Y  +Q 
Sbjct: 296 GNGLSIDEWLTYASTESLSYFMYQK 320


>gi|71021869|ref|XP_761165.1| hypothetical protein UM05018.1 [Ustilago maydis 521]
 gi|46100645|gb|EAK85878.1| hypothetical protein UM05018.1 [Ustilago maydis 521]
          Length = 464

 Score = 39.8 bits (92), Expect = 0.92,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 28/63 (44%), Gaps = 2/63 (3%)

Query: 336 MPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           MPT S+   +V R + ++ +     FA S  E+R  +    + +N    SN    ++  D
Sbjct: 147 MPTASLFMRDVERRLDVV-VFRSC-FARSAYESRSMVVQGKVTLNGVKCSNPNQLLEPGD 204

Query: 396 FDS 398
             S
Sbjct: 205 LIS 207


>gi|305662739|ref|YP_003859027.1| tryptophanyl-tRNA synthetase [Ignisphaera aggregans DSM 17230]
 gi|304377308|gb|ADM27147.1| tryptophanyl-tRNA synthetase [Ignisphaera aggregans DSM 17230]
          Length = 385

 Score = 39.8 bits (92), Expect = 0.93,   Method: Composition-based stats.
 Identities = 51/311 (16%), Positives = 88/311 (28%), Gaps = 66/311 (21%)

Query: 9   LSILSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ-KT 66
           L ++  R   +   +  + ++   S      Y G   +  + H GH+   +   WLQ K 
Sbjct: 46  LHLMIRRRIFYSHRDLDKWIEAYISGRRCALYTGRGPSGHT-HLGHILPWIFTKWLQDKL 104

Query: 67  GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
           G      M        D  F     +    +EI       + I          +   +++
Sbjct: 105 GVDLFFQMTD------DEKFWHSEEK--SYEEINAYA--YENILDLAALGLDPRKTHVII 154

Query: 127 NNETWLCSIKYIDLL----REIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ-- 180
           ++E        I  L     +I    +++      +         ++  +   Y  LQ  
Sbjct: 155 DSED-------IAFLYPIAIKIAKKITLST--QKATFG--FTDSTNIGMI--FYPTLQIA 201

Query: 181 -AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTAS-GTKMG 238
            AY   EL       L   G DQ        DL   L  PK   +   LL     G KM 
Sbjct: 202 VAYFPTELYGEPTEVLIPAGIDQDPYWRIARDLAPSLGYPKPTQIHCKLLPGLDIGGKMS 261

Query: 239 -------------------KTLSGA------------IWLNKEMTSPYNFWQYWRNIDDA 267
                              K + G             +  N ++   Y  ++     DD 
Sbjct: 262 ASKPETAIYTTDPPEIAKQKVMKGYTGGQPTAELQKKLGGNPDICPIYKMYEMIFEEDDK 321

Query: 268 DV-VSFAKRLT 277
            +   +    T
Sbjct: 322 KLNERYYACKT 332


>gi|21672854|ref|NP_660919.1| tryptophanyl-tRNA synthetase [Chlorobium tepidum TLS]
 gi|21645903|gb|AAM71261.1| tryptophanyl-tRNA synthetase [Chlorobium tepidum TLS]
          Length = 344

 Score = 39.8 bits (92), Expect = 0.93,   Method: Composition-based stats.
 Identities = 32/172 (18%), Positives = 55/172 (31%), Gaps = 37/172 (21%)

Query: 167 QSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLF---- 222
            SL +    Y +LQA D + L K     +   G DQ  ++    ++  +  +        
Sbjct: 128 DSLVYGHLGYPVLQAADIL-LYKGNVVPV---GEDQIPHVEITREIARKFNSHYQHPELG 183

Query: 223 ---------ALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWR-NIDDA---- 267
                          L    G  KM K+L   I L+    +P       R  + D     
Sbjct: 184 DVFPEPAPKITKFARLVGLDGKAKMSKSLGNTILLS---DAPEEVMAKMRPAVTDTQKVR 240

Query: 268 ----------DVVSFAKRLTTLP-MSEIDRMAKLQGKEINEAKKIIATEITT 308
                      V S+ ++ T    + EI+   +       + KK+ A  I+ 
Sbjct: 241 RNDPGRPEVCLVYSYHQKFTGESQLVEIETGCRSGALGCVDCKKMCAANISA 292


>gi|326427150|gb|EGD72720.1| hypothetical protein PTSG_04448 [Salpingoeca sp. ATCC 50818]
          Length = 546

 Score = 39.8 bits (92), Expect = 0.94,   Method: Composition-based stats.
 Identities = 37/237 (15%), Positives = 80/237 (33%), Gaps = 23/237 (9%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSF 86
           L+       +  Y G   ++ ++H GHL   +   +LQ+    P+ +      +  D  F
Sbjct: 217 LEKKAKGEPIFLYTGRGPSSQAMHLGHLIPFLFTKYLQEAFDLPLVI-----QMTDDEKF 271

Query: 87  RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGS 146
             +    +            +      I  G       + ++  ++    Y +++R    
Sbjct: 272 LFKRNLTLDDDPETGVAALCRENVKDIIAVGFDPDKTFIFSDLQYMGGDFYRNVVR-FER 330

Query: 147 FFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDF-----VELAKNYDCRLQMGGSD 201
             ++N+ +          RE ++  + F   I     F       +     C +     D
Sbjct: 331 CVTLNQAMK--IFD--FTRENNIGQISFC-AIQAVPSFPSSFPGIIQPGAHCLIPC-AID 384

Query: 202 QWGNIICGIDLGERLKTPK---LFALTSPLLTTASGTKMGKTLS--GAIWLNKEMTS 253
           Q        D+  RL   K   L ++  P +T  S +KM  + +   +I+L  +  +
Sbjct: 385 QDPYFRLTRDVAPRLGYEKPSLLHSVFFPAMTGGS-SKMSSSANAVASIFLTDDQDT 440


>gi|218461567|ref|ZP_03501658.1| tryptophanyl-tRNA synthetase [Rhizobium etli Kim 5]
          Length = 354

 Score = 39.8 bits (92), Expect = 0.94,   Method: Composition-based stats.
 Identities = 60/377 (15%), Positives = 118/377 (31%), Gaps = 94/377 (24%)

Query: 31  CSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDES 90
            S+     + G   T + LH G+    +  F   + G+  I  +    +           
Sbjct: 1   MSEFKKLVFSGVQPTGN-LHLGNYLGAIRRFVALQEGNDCIYCVVDMHA----------- 48

Query: 91  RRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFS- 149
              + +Q + E++       ++         +  ++ N++ +     +  +    +    
Sbjct: 49  ---LTAQLVHEDMPSQTRSIAAAFIAAGIDPEKHIVFNQSAVPQHAELAWIFNCVARIGW 105

Query: 150 VNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICG 209
           +NRM  F+    + + + SL    + Y  L A D + + +     +   G DQ  ++   
Sbjct: 106 MNRMTQFKDKAGKDREQASLGL--YAYPSLMAADIL-VYRATHVPV---GEDQKQHLELA 159

Query: 210 IDLG-------------------ERLKTPKLFA---LTSPLLTTA--------SGT-KMG 238
            D+                      +    + A   +  PL+            GT KM 
Sbjct: 160 RDIAMKFNLDYAEHIGRTGYGVDITVGDEPVHAYFPMVEPLIGGPAPRVMSLRDGTKKMS 219

Query: 239 KTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEA 298
           K+             P +       +DD D +S                     K+I +A
Sbjct: 220 KS------------DPSDL-SRINLMDDEDAIS---------------------KKIRKA 245

Query: 299 KKI---IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTL 355
           K     + +E   +  GR EA+          D S  SQ +      +  V +   L+ L
Sbjct: 246 KTDPDGLPSETDGL-QGRPEADNLVAIYAALADTS-KSQVLAEFGGQQFSVFKPA-LVDL 302

Query: 356 IVKAGFATSTNEARRHL 372
            +    A  T E RR +
Sbjct: 303 AINV-LAPITGEMRRLM 318


>gi|170744111|ref|YP_001772766.1| RNA-binding S4 domain-containing protein [Methylobacterium sp.
           4-46]
 gi|168198385|gb|ACA20332.1| RNA-binding S4 domain protein [Methylobacterium sp. 4-46]
          Length = 609

 Score = 39.8 bits (92), Expect = 0.94,   Method: Composition-based stats.
 Identities = 7/56 (12%), Positives = 21/56 (37%), Gaps = 1/56 (1%)

Query: 342 SKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
           +  E +    +  ++ +AG   S  +A   +    + +N   ++   + +   D  
Sbjct: 32  APSETAEPERIAKVMARAG-VASRRDAEAMILEGRVSLNGETLTTPAVTVGPGDRI 86


>gi|171911749|ref|ZP_02927219.1| hemolysin A [Verrucomicrobium spinosum DSM 4136]
          Length = 245

 Score = 39.4 bits (91), Expect = 0.94,   Method: Composition-based stats.
 Identities = 6/47 (12%), Positives = 17/47 (36%)

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
           L+V  G   S  + +R + +  + +N+  ++     +          
Sbjct: 9   LLVARGLCASREQGKRLILAGDVLVNDVPVTKAGQLVPEDSVIRVKV 55


>gi|88799562|ref|ZP_01115138.1| tryptophanyl-tRNA synthetase [Reinekea sp. MED297]
 gi|88777647|gb|EAR08846.1| tryptophanyl-tRNA synthetase [Reinekea sp. MED297]
          Length = 337

 Score = 39.4 bits (91), Expect = 0.94,   Method: Composition-based stats.
 Identities = 18/93 (19%), Positives = 33/93 (35%), Gaps = 17/93 (18%)

Query: 166 EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALT 225
           ++ +    F Y +L   D +        ++ +G  DQ  +I    D+ +R     ++  T
Sbjct: 128 DKGVEMGLFCYPVLMTADILMFN---GQKIPVG-KDQIQHIEMARDVAQRFN--YMYGET 181

Query: 226 SPL-----------LTTASGTKMGKTLSGAIWL 247
             L           +    G KM K+    I L
Sbjct: 182 FSLPEAVVDDSAMIIPGLDGRKMSKSYGNTIPL 214


>gi|331005382|ref|ZP_08328766.1| Tryptophanyl-tRNA synthetase [gamma proteobacterium IMCC1989]
 gi|330420836|gb|EGG95118.1| Tryptophanyl-tRNA synthetase [gamma proteobacterium IMCC1989]
          Length = 347

 Score = 39.4 bits (91), Expect = 0.95,   Method: Composition-based stats.
 Identities = 19/93 (20%), Positives = 35/93 (37%), Gaps = 13/93 (13%)

Query: 164 KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFA 223
             +  ++   ++Y +L A D +    +   R+ +G  DQ  ++    D+  R        
Sbjct: 136 DADFGVTMGLYSYPVLMAADILMFNAD---RVPVG-KDQIQHVEMARDIAARFNHHFGEN 191

Query: 224 LTSP---------LLTTASGTKMGKTLSGAIWL 247
            T P         +L    G KM K+ +  I L
Sbjct: 192 FTLPQAVVGDNVAVLQGLDGRKMSKSYNNTIPL 224


>gi|289425044|ref|ZP_06426821.1| pseudouridylate synthase [Propionibacterium acnes SK187]
 gi|289154022|gb|EFD02710.1| pseudouridylate synthase [Propionibacterium acnes SK187]
 gi|313792449|gb|EFS40542.1| conserved hypothetical protein [Propionibacterium acnes HL110PA1]
 gi|313801506|gb|EFS42755.1| conserved hypothetical protein [Propionibacterium acnes HL110PA2]
 gi|313838267|gb|EFS75981.1| conserved hypothetical protein [Propionibacterium acnes HL086PA1]
 gi|314963143|gb|EFT07243.1| conserved hypothetical protein [Propionibacterium acnes HL082PA1]
 gi|315078206|gb|EFT50249.1| conserved hypothetical protein [Propionibacterium acnes HL053PA2]
 gi|327453532|gb|EGF00187.1| hypothetical protein HMPREF9584_01968 [Propionibacterium acnes
           HL092PA1]
          Length = 245

 Score = 39.4 bits (91), Expect = 0.95,   Method: Composition-based stats.
 Identities = 9/48 (18%), Positives = 24/48 (50%), Gaps = 1/48 (2%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
            +G+ L  ++ +AG A S   A   + +  +++N  +I  +  ++  +
Sbjct: 4   EQGIRLQKVLAQAGLA-SRRAAEDMIAAGRVEVNGELIVEQGRRVDPE 50


>gi|284162136|ref|YP_003400759.1| ribosomal protein S4 [Archaeoglobus profundus DSM 5631]
 gi|284012133|gb|ADB58086.1| ribosomal protein S4 [Archaeoglobus profundus DSM 5631]
          Length = 169

 Score = 39.4 bits (91), Expect = 0.95,   Method: Composition-based stats.
 Identities = 18/134 (13%), Positives = 45/134 (33%), Gaps = 2/134 (1%)

Query: 271 SFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMS 330
               +       E+ R   +  K    A+ +++        G     KA     +   + 
Sbjct: 28  QLLIKYGLRNKRELWRFENILRKYRRVARDLLSKVNLPGREGEIARAKANAVIKKLVRIG 87

Query: 331 IHSQHMPTISISKDEVSRGM--GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEK 388
           +  ++     I    V   +   L T++ + G A +  +AR+ +    I I+   +++  
Sbjct: 88  VLEENATLDDILNLTVEDFLERRLQTVVYRQGLARTIKQARQLITHGHIAIDGRRVTSPS 147

Query: 389 LQIKLQDFDSTGNI 402
             ++  +    G  
Sbjct: 148 YIVERDEETKIGFY 161


>gi|289428195|ref|ZP_06429891.1| pseudouridylate synthase [Propionibacterium acnes J165]
 gi|295130922|ref|YP_003581585.1| pseudouridylate synthase [Propionibacterium acnes SK137]
 gi|289158576|gb|EFD06783.1| pseudouridylate synthase [Propionibacterium acnes J165]
 gi|291375273|gb|ADD99127.1| pseudouridylate synthase [Propionibacterium acnes SK137]
 gi|313764054|gb|EFS35418.1| conserved hypothetical protein [Propionibacterium acnes HL013PA1]
 gi|313771915|gb|EFS37881.1| conserved hypothetical protein [Propionibacterium acnes HL074PA1]
 gi|313807148|gb|EFS45643.1| conserved hypothetical protein [Propionibacterium acnes HL087PA2]
 gi|313809640|gb|EFS47376.1| conserved hypothetical protein [Propionibacterium acnes HL083PA1]
 gi|313816404|gb|EFS54118.1| conserved hypothetical protein [Propionibacterium acnes HL059PA1]
 gi|313819344|gb|EFS57058.1| conserved hypothetical protein [Propionibacterium acnes HL046PA2]
 gi|313819993|gb|EFS57707.1| conserved hypothetical protein [Propionibacterium acnes HL036PA1]
 gi|313823215|gb|EFS60929.1| conserved hypothetical protein [Propionibacterium acnes HL036PA2]
 gi|313824997|gb|EFS62711.1| conserved hypothetical protein [Propionibacterium acnes HL063PA1]
 gi|313827299|gb|EFS65013.1| conserved hypothetical protein [Propionibacterium acnes HL063PA2]
 gi|313829960|gb|EFS67674.1| conserved hypothetical protein [Propionibacterium acnes HL007PA1]
 gi|313833036|gb|EFS70750.1| conserved hypothetical protein [Propionibacterium acnes HL056PA1]
 gi|314914915|gb|EFS78746.1| conserved hypothetical protein [Propionibacterium acnes HL005PA4]
 gi|314917860|gb|EFS81691.1| conserved hypothetical protein [Propionibacterium acnes HL050PA1]
 gi|314919749|gb|EFS83580.1| conserved hypothetical protein [Propionibacterium acnes HL050PA3]
 gi|314924832|gb|EFS88663.1| conserved hypothetical protein [Propionibacterium acnes HL036PA3]
 gi|314930009|gb|EFS93840.1| conserved hypothetical protein [Propionibacterium acnes HL067PA1]
 gi|314956415|gb|EFT00727.1| conserved hypothetical protein [Propionibacterium acnes HL027PA1]
 gi|314957284|gb|EFT01387.1| conserved hypothetical protein [Propionibacterium acnes HL002PA1]
 gi|314960611|gb|EFT04713.1| conserved hypothetical protein [Propionibacterium acnes HL002PA2]
 gi|314967733|gb|EFT11832.1| conserved hypothetical protein [Propionibacterium acnes HL037PA1]
 gi|314972874|gb|EFT16971.1| conserved hypothetical protein [Propionibacterium acnes HL053PA1]
 gi|314975703|gb|EFT19798.1| conserved hypothetical protein [Propionibacterium acnes HL045PA1]
 gi|314978089|gb|EFT22183.1| conserved hypothetical protein [Propionibacterium acnes HL072PA2]
 gi|314984113|gb|EFT28205.1| conserved hypothetical protein [Propionibacterium acnes HL005PA1]
 gi|314986250|gb|EFT30342.1| conserved hypothetical protein [Propionibacterium acnes HL005PA2]
 gi|314989536|gb|EFT33627.1| conserved hypothetical protein [Propionibacterium acnes HL005PA3]
 gi|315080909|gb|EFT52885.1| conserved hypothetical protein [Propionibacterium acnes HL078PA1]
 gi|315084832|gb|EFT56808.1| conserved hypothetical protein [Propionibacterium acnes HL027PA2]
 gi|315086005|gb|EFT57981.1| conserved hypothetical protein [Propionibacterium acnes HL002PA3]
 gi|315088276|gb|EFT60252.1| conserved hypothetical protein [Propionibacterium acnes HL072PA1]
 gi|315095697|gb|EFT67673.1| conserved hypothetical protein [Propionibacterium acnes HL038PA1]
 gi|315098205|gb|EFT70181.1| conserved hypothetical protein [Propionibacterium acnes HL059PA2]
 gi|315101641|gb|EFT73617.1| conserved hypothetical protein [Propionibacterium acnes HL046PA1]
 gi|315109460|gb|EFT81436.1| conserved hypothetical protein [Propionibacterium acnes HL030PA2]
 gi|327327900|gb|EGE69674.1| ribosomal large subunit pseudouridine synthase B [Propionibacterium
           acnes HL096PA3]
 gi|327330039|gb|EGE71792.1| ribosomal large subunit pseudouridine synthase B [Propionibacterium
           acnes HL096PA2]
 gi|327442730|gb|EGE89384.1| hypothetical protein HMPREF9570_02678 [Propionibacterium acnes
           HL043PA1]
 gi|327443872|gb|EGE90526.1| hypothetical protein HMPREF9571_02471 [Propionibacterium acnes
           HL043PA2]
 gi|327443940|gb|EGE90594.1| hypothetical protein HMPREF9568_01854 [Propionibacterium acnes
           HL013PA2]
 gi|327452345|gb|EGE98999.1| hypothetical protein HMPREF9581_01384 [Propionibacterium acnes
           HL087PA3]
 gi|327452780|gb|EGE99434.1| hypothetical protein HMPREF9586_02253 [Propionibacterium acnes
           HL083PA2]
 gi|328752647|gb|EGF66263.1| hypothetical protein HMPREF9588_02444 [Propionibacterium acnes
           HL025PA2]
 gi|328753801|gb|EGF67417.1| hypothetical protein HMPREF9579_01456 [Propionibacterium acnes
           HL087PA1]
 gi|328755029|gb|EGF68645.1| hypothetical protein HMPREF9563_01406 [Propionibacterium acnes
           HL020PA1]
 gi|328761441|gb|EGF74967.1| ribosomal large subunit pseudouridine synthase B [Propionibacterium
           acnes HL099PA1]
 gi|332675803|gb|AEE72619.1| ribosomal large subunit pseudouridine synthase B [Propionibacterium
           acnes 266]
          Length = 245

 Score = 39.4 bits (91), Expect = 0.95,   Method: Composition-based stats.
 Identities = 9/48 (18%), Positives = 24/48 (50%), Gaps = 1/48 (2%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
            +G+ L  ++ +AG A S   A   + +  +++N  +I  +  ++  +
Sbjct: 4   EQGIRLQKVLAQAGLA-SRRAAEDMIAAGRVEVNGELIVEQGRRVDPE 50


>gi|91798171|gb|ABE60310.1| tryptophanyl-tRNA synthetase [Chromohalobacter salexigens DSM 3043]
          Length = 353

 Score = 39.4 bits (91), Expect = 0.95,   Method: Composition-based stats.
 Identities = 23/92 (25%), Positives = 34/92 (36%), Gaps = 14/92 (15%)

Query: 166 EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL-GERLKTPKLFAL 224
           ++ +S   F Y +L A D + + K     +   G DQ  +I    D+ G      K    
Sbjct: 144 DKGVSMGLFGYPVLMAADIL-MFKANKVPV---GRDQIQHIEMARDMAGRFNHIYKGDYF 199

Query: 225 TSP---------LLTTASGTKMGKTLSGAIWL 247
           T P         +L    G KM K+    I L
Sbjct: 200 TLPEAVVDENVEVLRGLDGRKMSKSYDNTIPL 231


>gi|50842867|ref|YP_056094.1| ribosomal large subunit pseudouridine synthase B [Propionibacterium
           acnes KPA171202]
 gi|282853641|ref|ZP_06262978.1| pseudouridylate synthase [Propionibacterium acnes J139]
 gi|50840469|gb|AAT83136.1| ribosomal large subunit pseudouridine synthase B [Propionibacterium
           acnes KPA171202]
 gi|282583094|gb|EFB88474.1| pseudouridylate synthase [Propionibacterium acnes J139]
 gi|313813285|gb|EFS50999.1| conserved hypothetical protein [Propionibacterium acnes HL025PA1]
 gi|314923703|gb|EFS87534.1| conserved hypothetical protein [Propionibacterium acnes HL001PA1]
 gi|314967055|gb|EFT11154.1| conserved hypothetical protein [Propionibacterium acnes HL082PA2]
 gi|314983150|gb|EFT27242.1| conserved hypothetical protein [Propionibacterium acnes HL110PA3]
 gi|315092372|gb|EFT64348.1| conserved hypothetical protein [Propionibacterium acnes HL110PA4]
 gi|315092741|gb|EFT64717.1| conserved hypothetical protein [Propionibacterium acnes HL060PA1]
 gi|315105956|gb|EFT77932.1| conserved hypothetical protein [Propionibacterium acnes HL030PA1]
 gi|327327189|gb|EGE68965.1| ribosomal large subunit pseudouridine synthase B [Propionibacterium
           acnes HL103PA1]
          Length = 245

 Score = 39.4 bits (91), Expect = 0.95,   Method: Composition-based stats.
 Identities = 9/48 (18%), Positives = 24/48 (50%), Gaps = 1/48 (2%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
            +G+ L  ++ +AG A S   A   + +  +++N  +I  +  ++  +
Sbjct: 4   EQGIRLQKVLAQAGLA-SRRAAEDMIAAGRVEVNGELIVEQGRRVDPE 50


>gi|269128486|ref|YP_003301856.1| 30S ribosomal protein S4 [Thermomonospora curvata DSM 43183]
 gi|268313444|gb|ACY99818.1| ribosomal protein S4 [Thermomonospora curvata DSM 43183]
          Length = 209

 Score = 39.4 bits (91), Expect = 0.96,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 20/47 (42%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG 400
            ++ +AGFA S + AR+ ++    K+N   +      +   D     
Sbjct: 102 NVVYRAGFAKSRDMARQLIRHGHFKVNGRKVDIPSFLVSENDVIEVK 148


>gi|261339101|ref|ZP_05966959.1| hypothetical protein ENTCAN_05314 [Enterobacter cancerogenus ATCC
           35316]
 gi|288318937|gb|EFC57875.1| tryptophan--tRNA ligase [Enterobacter cancerogenus ATCC 35316]
          Length = 334

 Score = 39.4 bits (91), Expect = 0.96,   Method: Composition-based stats.
 Identities = 34/217 (15%), Positives = 60/217 (27%), Gaps = 29/217 (13%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMR-SQEIQEN 102
            T   LH GH    +      +  H    L+     +       D      +    I E 
Sbjct: 12  PTGP-LHLGHFVGSLRQRVALQQTHNQFVLIADLQGL------TDNGSNPQKIRDNIPEV 64

Query: 103 IEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR 162
           +                 T   + +    L  +  + +     +    N  +  E  +  
Sbjct: 65  LADYLAAG-----IDPNLTTICLQSALPALAELTMLYMNIVTVARVERNPTVKNEIAQKG 119

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT---- 218
             R   + F    Y I QA D        +C     G DQ   I    ++  ++ +    
Sbjct: 120 FARSLPVGF--MAYPISQAADITAFKA--ECV--PVGDDQLPMIEQTNEIVHKMNSLLPT 173

Query: 219 ------PKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
                   + + TS L       KM K+L   + L+ 
Sbjct: 174 PVLRHCKAMLSDTSRLPGIDGSAKMSKSLGNTLHLSA 210


>gi|169639633|gb|ACA60899.1| pol protein [Thalassiosira pseudonana]
          Length = 1388

 Score = 39.4 bits (91), Expect = 0.96,   Method: Composition-based stats.
 Identities = 22/116 (18%), Positives = 41/116 (35%), Gaps = 10/116 (8%)

Query: 261 WRNIDDADVVS-FAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTM------VHGR 313
            R+  D ++   + + L  L  ++I     +   E +EA K +  E   +       H R
Sbjct: 405 MRSKADGEMQKAYLRLLARLKAAKIVPKKHVLDNECSEAMKALIKETCQLELVPPGTHRR 464

Query: 314 EEAEKAATAAMECFDM--SIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
             AEKA     + F    +  +   P     +      M L  L+ +A    + + 
Sbjct: 465 NIAEKAIQTFKKHFIGILAGTADDFPLHLWDRLLPQAEMTL-NLLRQANARPTVSA 519


>gi|316932709|ref|YP_004107691.1| RNA-binding S4 domain-containing protein [Rhodopseudomonas
           palustris DX-1]
 gi|315600423|gb|ADU42958.1| RNA-binding S4 domain protein [Rhodopseudomonas palustris DX-1]
          Length = 717

 Score = 39.4 bits (91), Expect = 0.98,   Method: Composition-based stats.
 Identities = 10/51 (19%), Positives = 21/51 (41%), Gaps = 1/51 (1%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
             G  +  ++ +AG   S  +A   +    + +N  +I +  L +K  D  
Sbjct: 388 KAGERIAKVVARAGLC-SRRDAEAWITEGRVAVNGKVIDSPALDVKASDVI 437


>gi|163783136|ref|ZP_02178130.1| 30S ribosomal protein S4 [Hydrogenivirga sp. 128-5-R1-1]
 gi|159881470|gb|EDP74980.1| 30S ribosomal protein S4 [Hydrogenivirga sp. 128-5-R1-1]
          Length = 211

 Score = 39.4 bits (91), Expect = 0.98,   Method: Composition-based stats.
 Identities = 14/81 (17%), Positives = 32/81 (39%), Gaps = 3/81 (3%)

Query: 320 ATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKI 379
                  FD++  S+   T  +    + R +    ++ + GFAT+  +AR+ +    I +
Sbjct: 71  EKQFKRYFDLAAKSKEN-TADVLLQLLERRLD--NVVYRLGFATTRRQARQLVAHGHILV 127

Query: 380 NNSIISNEKLQIKLQDFDSTG 400
           N   +     +++  D     
Sbjct: 128 NGRKVDIPHYEVEPGDIIEVK 148


>gi|299535949|ref|ZP_07049268.1| tryptophanyl-tRNA synthetase [Lysinibacillus fusiformis ZC1]
 gi|298728554|gb|EFI69110.1| tryptophanyl-tRNA synthetase [Lysinibacillus fusiformis ZC1]
          Length = 329

 Score = 39.4 bits (91), Expect = 0.98,   Method: Composition-based stats.
 Identities = 44/248 (17%), Positives = 79/248 (31%), Gaps = 37/248 (14%)

Query: 35  VVTAYIGYDLTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGG-GTSIIGDPSFRDESRR 92
           + T + G   T   +  G+       F  LQ  G+    ++     ++  DP    E R 
Sbjct: 1   MTTIFSGVQPTGI-VTLGNYLGAFKQFPALQDEGNAIYCIVDQHAITVAQDP---KELRE 56

Query: 93  MMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNR 152
            +R          I    S+          A       W        +L+ + S   + R
Sbjct: 57  SIRKLAATYIATGIDPKKSTLFIQSEVPAHAQ----AGW--------MLQCVASIGELER 104

Query: 153 MLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL 212
           M      + +   ++S+S     Y  L A D +     Y+  +   G DQ  +I    DL
Sbjct: 105 MTQ---FKDKSHGKESVSAALLTYPPLMAADILL----YNTNIVPVGDDQKQHIELTRDL 157

Query: 213 GERLKTPKLFALTSPLLTTASG-----------TKMGKTLSGAIWLNKEMTSPYNFWQYW 261
            ER        LT P +                 KM K+        + + +  +  +  
Sbjct: 158 AERFNKRFGDVLTIPEIQLPKAGARIKSLQEPTKKMSKSDPNTKATIRLLDTAKDIEKKI 217

Query: 262 RN-IDDAD 268
           ++ + D+D
Sbjct: 218 KSAVTDSD 225


>gi|92118637|ref|YP_578366.1| pseudouridine synthase, Rsu [Nitrobacter hamburgensis X14]
 gi|91801531|gb|ABE63906.1| Pseudouridine synthase, Rsu [Nitrobacter hamburgensis X14]
          Length = 687

 Score = 39.4 bits (91), Expect = 0.98,   Method: Composition-based stats.
 Identities = 9/51 (17%), Positives = 22/51 (43%), Gaps = 1/51 (1%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
             G  +  ++ +AG   S  +A   +    + +N  +I++  L +  +D  
Sbjct: 357 KTGERIAKVMARAG-VASRRDAEEWVTQGRVAVNGRVINSPALDVTSRDVI 406


>gi|291533602|emb|CBL06715.1| Ribosomal protein S4 and related proteins [Megamonas hypermegale
           ART12/1]
          Length = 125

 Score = 39.4 bits (91), Expect = 0.99,   Method: Composition-based stats.
 Identities = 9/50 (18%), Positives = 21/50 (42%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
           +  ++ + G A++  +AR+ +    I +N   +      IK+ D      
Sbjct: 17  IDNVVFRLGLASTRRQARQLVSHGHITVNGKRLDIPSALIKVGDVIGVKE 66


>gi|282860273|ref|ZP_06269343.1| pseudouridylate synthase [Prevotella bivia JCVIHMP010]
 gi|282586947|gb|EFB92182.1| pseudouridylate synthase [Prevotella bivia JCVIHMP010]
          Length = 555

 Score = 39.4 bits (91), Expect = 0.99,   Method: Composition-based stats.
 Identities = 13/71 (18%), Positives = 30/71 (42%), Gaps = 1/71 (1%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           + +  + L   +  AG   S  EA   + +  + +N  +I+    +I   D     +  +
Sbjct: 315 DPTEPLRLNKFLANAGVC-SRREADDFILAGQVTVNGEVINELGTKILRTDEVKFQDKLV 373

Query: 405 SFGKKNHIICH 415
           S  KK +++ +
Sbjct: 374 SLEKKVYVLLN 384


>gi|256080708|ref|XP_002576620.1| tryptophanyl-tRNA synthetase [Schistosoma mansoni]
 gi|238661895|emb|CAZ32857.1| tryptophanyl-tRNA synthetase, putative [Schistosoma mansoni]
          Length = 404

 Score = 39.4 bits (91), Expect = 0.99,   Method: Composition-based stats.
 Identities = 27/153 (17%), Positives = 48/153 (31%), Gaps = 42/153 (27%)

Query: 174 FNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER------------------ 215
           F Y  LQA D +     Y   L   G+DQ  +I    DL                     
Sbjct: 183 FTYPTLQAADILL----YGAHLVPVGADQITHIELARDLVRSAVHKWPSLSSILHLPNSL 238

Query: 216 -LKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVS--- 271
               PK+  LT+P        KM K+ +  + +     +P + ++  +  +   +     
Sbjct: 239 IFNAPKINNLTNP------NKKMSKSDTSELGIIYLTDTPDHIYKKIKRAETDSIRKINY 292

Query: 272 ----------FAKRLTTLPMSEIDRMAKLQGKE 294
                       + L+ +   EI+ +      E
Sbjct: 293 DHEKRPGVSNLLRILSAIQGREIEEILSTVANE 325


>gi|319945991|ref|ZP_08020240.1| tryptophan--tRNA ligase [Streptococcus australis ATCC 700641]
 gi|319747799|gb|EFW00044.1| tryptophan--tRNA ligase [Streptococcus australis ATCC 700641]
          Length = 353

 Score = 39.4 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 41/230 (17%), Positives = 63/230 (27%), Gaps = 42/230 (18%)

Query: 44  LTASSLHAGHLTQLML---LFWLQKTGHKPISLMG--GGTSIIGDPSFRDESRRMMRSQE 98
            T   LH GH    +    L   +   H  + L      T    DP              
Sbjct: 24  PTGK-LHIGHYVGSLKNRVLMQNEDKYHMFVFLADQQALTDHAKDPQ------------- 69

Query: 99  IQENIEKIKGIFSSFIK--YGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSF 156
               +E I  +   ++       K+   + +    L  +    +     S    N  +  
Sbjct: 70  --TIVESIGNVALDYLAAGLDPNKSTIFIQSQIPELAELTMYYMNLVSVSRLERNPTVKT 127

Query: 157 ESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL 216
           E  +          FL   Y + QA D      N    L   G+DQ   I    ++    
Sbjct: 128 EIAQKGFGESIPSGFL--VYPVSQAADITAFKAN----LVPVGTDQKPMIEQTREIVRSF 181

Query: 217 KTP-KLFALTSP-----------LLTTASGT-KMGKTLSGAIWLNKEMTS 253
                   L  P            L    G  KM K+L   I+L  +M +
Sbjct: 182 NHAYHCDVLVEPEGIFPKNEAAGRLPGLDGNAKMSKSLGNGIYLADDMDT 231


>gi|261250681|ref|ZP_05943255.1| tryptophanyl-tRNA synthetase [Vibrio orientalis CIP 102891]
 gi|260937554|gb|EEX93542.1| tryptophanyl-tRNA synthetase [Vibrio orientalis CIP 102891]
          Length = 340

 Score = 39.4 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 38/219 (17%), Positives = 70/219 (31%), Gaps = 35/219 (15%)

Query: 45  TASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMR-SQEIQENI 103
           T   LH GH    +      ++  +   L+     +       D +    + S  I   +
Sbjct: 20  TGP-LHLGHYVGSLKQRVALQSICEQNILVADMQGL------TDNAHNPNKVSSNILNVV 72

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL 163
                +          +T   + +    L  +          +  ++ R+    +V+S +
Sbjct: 73  ADYLAVG-----IDPSQTTICLQSQLPALAELTMF-----YSNLVTIARLERNPTVKSEI 122

Query: 164 KR---EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK--- 217
           +    E+SL      Y I QA D       ++  L   G DQ   +    ++  +L    
Sbjct: 123 QSKGIERSLPAGFLTYPISQAADITA----FNATLVPVGDDQLPMLEQTNEIVRKLNSLA 178

Query: 218 TPKLFALTSPLLTT------ASGT-KMGKTLSGAIWLNK 249
              +     PLL+         G  KM KT+  AI L  
Sbjct: 179 GKTVLKECKPLLSNASRLPSTDGKNKMSKTMGNAINLGA 217


>gi|86356557|ref|YP_468449.1| hemolysin protein [Rhizobium etli CFN 42]
 gi|86280659|gb|ABC89722.1| hemolysin protein [Rhizobium etli CFN 42]
          Length = 248

 Score = 39.4 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 7/32 (21%), Positives = 16/32 (50%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIIS 385
            L+V  G   S + AR  ++   ++I   +++
Sbjct: 11  QLLVSRGLFASRSRARDAVQRGTVRIGGQLVT 42


>gi|85706175|ref|ZP_01037270.1| lysyl-tRNA synthetase [Roseovarius sp. 217]
 gi|85669339|gb|EAQ24205.1| lysyl-tRNA synthetase [Roseovarius sp. 217]
          Length = 524

 Score = 39.4 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 18/85 (21%), Positives = 24/85 (28%), Gaps = 6/85 (7%)

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            DF           +M G D   N      +   L  P     T  L     G K+ K+ 
Sbjct: 236 PDFGARWAALGVDFEMYGKDHSTNTPIYDGICRALGAPAPEHFTYELFLDEGGQKISKSS 295

Query: 242 SGAI----WLNKEMTS--PYNFWQY 260
              +    WL    T    Y  +Q 
Sbjct: 296 GNGVSIDQWLTYAATESLSYFMFQK 320


>gi|227485363|ref|ZP_03915679.1| isoleucine--tRNA ligase [Anaerococcus lactolyticus ATCC 51172]
 gi|227236654|gb|EEI86669.1| isoleucine--tRNA ligase [Anaerococcus lactolyticus ATCC 51172]
          Length = 1039

 Score = 39.4 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 21/111 (18%), Positives = 35/111 (31%), Gaps = 16/111 (14%)

Query: 169 LSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQ---WGNIICGIDLGERLKTPKLFALT 225
           + F + +Y       F +    Y       G DQ   W   +  I      + P    L 
Sbjct: 529 MPFAQLHYPFENKELFEKGY--YPADFICEGIDQTRGWFYSLMAISTITMGRAPYKNVLV 586

Query: 226 SPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRL 276
           + L+   +G KM K+    +        P+  +  +     AD V F    
Sbjct: 587 NDLVVDKNGQKMSKSRGNTL-------DPFALFDKY----GADAVRFYSLY 626


>gi|306827950|ref|ZP_07461217.1| ribosomal large subunit pseudouridine synthase B [Streptococcus
           pyogenes ATCC 10782]
 gi|304429869|gb|EFM32911.1| ribosomal large subunit pseudouridine synthase B [Streptococcus
           pyogenes ATCC 10782]
          Length = 240

 Score = 39.4 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 20/40 (50%), Gaps = 1/40 (2%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           I  AG A S  +A   +K   + +N  +I++    +KL D
Sbjct: 7   IAHAGIA-SRRKAEELIKQGLVTLNGQVITDLATTVKLGD 45


>gi|294085468|ref|YP_003552228.1| lysyl-tRNA synthetase [Candidatus Puniceispirillum marinum
           IMCC1322]
 gi|292665043|gb|ADE40144.1| lysyl-tRNA synthetase [Candidatus Puniceispirillum marinum
           IMCC1322]
          Length = 537

 Score = 39.4 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 12/67 (17%), Positives = 24/67 (35%)

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           D+           +M G D   ++     +   L       LT  L   A+G K+ K+  
Sbjct: 236 DWAMRWYALGVDYEMNGKDLTDSVTQSSKIVRALGAIPPAGLTYELFLDANGEKISKSKG 295

Query: 243 GAIWLNK 249
             + +++
Sbjct: 296 NGLSIDE 302


>gi|322384358|ref|ZP_08058056.1| 30S ribosomal protein S4-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
 gi|321150860|gb|EFX44297.1| 30S ribosomal protein S4-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
          Length = 199

 Score = 39.4 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 15/82 (18%), Positives = 29/82 (35%), Gaps = 3/82 (3%)

Query: 320 ATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKI 379
                  ++ +I    +P IS     +     L  L+ + GFA S   AR+ +    + +
Sbjct: 64  EKQFHNLYNKAIK---LPGISGENFMILLESRLDNLVFRLGFANSRAGARQLVSHGHVTV 120

Query: 380 NNSIISNEKLQIKLQDFDSTGN 401
           N   +     Q+ + D      
Sbjct: 121 NGKKVDIASYQVSVGDVIGLRE 142


>gi|254444170|ref|ZP_05057646.1| S4 domain protein [Verrucomicrobiae bacterium DG1235]
 gi|198258478|gb|EDY82786.1| S4 domain protein [Verrucomicrobiae bacterium DG1235]
          Length = 144

 Score = 39.4 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 12/76 (15%), Positives = 30/76 (39%), Gaps = 3/76 (3%)

Query: 320 ATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKI 379
                  F+ +  ++ + T +I    +   +   +++   GF  +   AR+ +    I +
Sbjct: 6   EKQFRRTFEQAKATRGV-TGTIFLQLLETRLD--SIVYDLGFTKTRKAARQFVNHGHISV 62

Query: 380 NNSIISNEKLQIKLQD 395
           N   +     Q+K+ D
Sbjct: 63  NGQKVDIPSYQVKVGD 78


>gi|192360200|ref|YP_001982275.1| RNA pseudouridylate synthase family protein [Cellvibrio japonicus
           Ueda107]
 gi|190686365|gb|ACE84043.1| RNA pseudouridylate synthase family protein [Cellvibrio japonicus
           Ueda107]
          Length = 376

 Score = 39.4 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 14/70 (20%), Positives = 31/70 (44%), Gaps = 4/70 (5%)

Query: 337 PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIIS-NEKLQIKLQD 395
           P++  S   V     L  ++ +AG   S  E  R ++   +K+N+ I +  +++ +  + 
Sbjct: 78  PSVKESASPVDE--KLQKVLARAGI-GSRREMERAIEEGRVKVNDRIATLGDRVTLTDKI 134

Query: 396 FDSTGNIKLS 405
           F     + L 
Sbjct: 135 FVGGQRVVLR 144


>gi|260887007|ref|ZP_05898270.1| tryptophan--tRNA ligase [Selenomonas sputigena ATCC 35185]
 gi|330839212|ref|YP_004413792.1| tryptophanyl-tRNA synthetase [Selenomonas sputigena ATCC 35185]
 gi|260863069|gb|EEX77569.1| tryptophan--tRNA ligase [Selenomonas sputigena ATCC 35185]
 gi|329746976|gb|AEC00333.1| tryptophanyl-tRNA synthetase [Selenomonas sputigena ATCC 35185]
          Length = 363

 Score = 39.4 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 40/251 (15%), Positives = 78/251 (31%), Gaps = 56/251 (22%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     LQ +G +  I +M      I D      +  M   ++I++
Sbjct: 11  PTGR-LHLGHYVGSLKRRVELQNSGEYDEIYIM------IADAQ--ALTDNMDNPEKIRQ 61

Query: 102 NIEKIKGIFSSFIKY----GTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRM---- 153
                  I    + Y           + + +E      +  ++     +  +V+R+    
Sbjct: 62  ------NIIEVALDYMACGLDPAKTVMFVQSEV----PQLFEMTAYYMNLVTVSRLQRNP 111

Query: 154 -LSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL 212
            +  E      +    + F  F Y I QA D       +       G DQ   +    ++
Sbjct: 112 TVKAEIQMRNFETSIPVGF--FTYPISQAADITA----FQATTVPVGEDQEPMLEQTREI 165

Query: 213 GERLKTPKLFALT--------------SPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFW 258
             +    +++  T                L  T    KM K+L   I+++          
Sbjct: 166 VRKFN--EVYGETLVEPQSLLASQKAAMRLPGTDGKAKMSKSLGNGIYISDSAA---EVK 220

Query: 259 QYWRNI-DDAD 268
           +   ++  D D
Sbjct: 221 KKVMSMYTDPD 231


>gi|210614350|ref|ZP_03290169.1| hypothetical protein CLONEX_02383 [Clostridium nexile DSM 1787]
 gi|210150694|gb|EEA81703.1| hypothetical protein CLONEX_02383 [Clostridium nexile DSM 1787]
          Length = 69

 Score = 39.4 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 11/65 (16%), Positives = 21/65 (32%), Gaps = 19/65 (29%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
              + L   +  AG   S  EA+  ++   +K+N  + +                     
Sbjct: 8   EEFIKLGQALKAAGLVESGVEAKEVIQDGLVKVNGEVDT-------------------RR 48

Query: 407 GKKNH 411
           GKK +
Sbjct: 49  GKKLY 53


>gi|164686750|ref|ZP_02210778.1| hypothetical protein CLOBAR_00345 [Clostridium bartlettii DSM
           16795]
 gi|164604140|gb|EDQ97605.1| hypothetical protein CLOBAR_00345 [Clostridium bartlettii DSM
           16795]
          Length = 341

 Score = 39.4 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 40/233 (17%), Positives = 69/233 (29%), Gaps = 31/233 (13%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN 102
            T   LH GH T  +     LQ      + +M      + D     ++ +    + +   
Sbjct: 12  PTGK-LHLGHYTGSLKNRVALQNEDKYDMFVM------VADQQALTDNAK-NPKKIVDNL 63

Query: 103 IEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR 162
           +E      S  +     KT   + +    L  +    L     S    N  +  E  +  
Sbjct: 64  LEVTMDYMSVGLD--PEKTTLFIQSQVPELAELTMYYLNLVTVSRLHRNPTVKSEIQQKG 121

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLF 222
                   F  F Y + Q  D      +    L   G+DQ   I    ++     +    
Sbjct: 122 FGESIPAGF--FIYPVSQVADITAFKAD----LVPVGNDQKPMIEQTREIVRSFNSTYGD 175

Query: 223 ALTSP----------LLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNI 264
            L  P           L    G  KM K+L  AI+L+ +        +   ++
Sbjct: 176 VLVEPEGMYPEGIAGRLPGLDGKAKMSKSLGNAIYLSDDED---EVRKKVMSM 225


>gi|161897778|ref|YP_575009.2| tryptophanyl-tRNA synthetase [Chromohalobacter salexigens DSM 3043]
          Length = 337

 Score = 39.4 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 23/92 (25%), Positives = 34/92 (36%), Gaps = 14/92 (15%)

Query: 166 EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL-GERLKTPKLFAL 224
           ++ +S   F Y +L A D + + K     +   G DQ  +I    D+ G      K    
Sbjct: 128 DKGVSMGLFGYPVLMAADIL-MFKANKVPV---GRDQIQHIEMARDMAGRFNHIYKGDYF 183

Query: 225 TSP---------LLTTASGTKMGKTLSGAIWL 247
           T P         +L    G KM K+    I L
Sbjct: 184 TLPEAVVDENVEVLRGLDGRKMSKSYDNTIPL 215


>gi|332975790|gb|EGK12671.1| tryptophan--tRNA ligase [Desmospora sp. 8437]
          Length = 342

 Score = 39.4 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 38/252 (15%), Positives = 72/252 (28%), Gaps = 41/252 (16%)

Query: 33  QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRR 92
           + +   + G   T   LH G+      L        +           + D       R 
Sbjct: 14  ERMKRVFSGMQPTGD-LHLGNYIG--ALKRFIPLQEEAECFF-----CVVDLHALTVPRD 65

Query: 93  MMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET----WLCSIKYIDLLREIGSFF 148
               +   + +E      ++ +            N       WL        L+ I    
Sbjct: 66  P--EELRSKTLELAGLYLAAGLDPERSALFVQSHNPAHSEGAWL--------LQCITRMG 115

Query: 149 SVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIIC 208
            + RM      + + K   S +   F+Y +L A D +     Y   L   G DQ  ++  
Sbjct: 116 ELGRMTQ---FKDKGKGSDSATAGLFSYPVLMAADILL----YQADLVPVGEDQKQHLEL 168

Query: 209 GIDLGERLKT---------PKLFALTSPLLTTASG--TKMGKTLSGAIWLNKEMTSPYNF 257
             DL +R                  T   +        KM K+   ++   + +  P   
Sbjct: 169 TRDLADRFNRIYGEVFKIPEPQIGETGARIMALDNPEKKMSKSADSSLNSIQLLDDPDLI 228

Query: 258 WQYW-RNIDDAD 268
            + + R + D++
Sbjct: 229 LKKFKRAVTDSE 240


>gi|325292121|ref|YP_004277985.1| hemolysin [Agrobacterium sp. H13-3]
 gi|325059974|gb|ADY63665.1| hemolysin [Agrobacterium sp. H13-3]
          Length = 250

 Score = 39.4 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 8/46 (17%), Positives = 15/46 (32%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
                L  L+V  G   S + AR  +    + +N    +     + 
Sbjct: 5   PENERLDQLLVSLGHFASRSRARDAIARGTVSVNGKTATKPSQTVA 50


>gi|295098901|emb|CBK87990.1| tryptophanyl-tRNA synthetase [Eubacterium cylindroides T2-87]
          Length = 329

 Score = 39.4 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 45/295 (15%), Positives = 87/295 (29%), Gaps = 45/295 (15%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   T   LH G+    +  F   +  ++    +    + I  P+     R       I 
Sbjct: 7   GIKPTGR-LHLGNYIGAISQFVKYQDEYEMYIFIANQHA-ITVPTDPKALR-QNTKDLIA 63

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
             +                K    + ++      + +  +   +     + RM  ++   
Sbjct: 64  LYLAAG---------LDPEKCTLFLQSDVDAHVKLGW--VFTCLTYMGELQRMTQYKD-- 110

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP- 219
              K E  ++   F Y  L A D +    +Y    Q    DQ  ++     L ER     
Sbjct: 111 KTAKGETGITDGLFTYPCLMAADILLYDADYVPVGQ----DQKQHVELTRHLAERFNNRY 166

Query: 220 -KLFALTSPLLTTASGT---------KMGKTLSGAIWLNKEMTSPYNFWQYWRN-IDDAD 268
            + F +  PL T              KM K+ +        +  P    +   + + D+ 
Sbjct: 167 SETFVVPQPLETKVGKKIFSLQDPTKKMSKSETDTKGTIDLLDDPAVARKKIMSAVTDSV 226

Query: 269 ------------VVSFAKRLTTLPMSEIDRMAKL-QGKEINEAKKIIATEITTMV 310
                       + +     + L    I+ + K  +GK   E KK I   +   +
Sbjct: 227 GIIQYDPESQPGLANLLTIQSVLANEPIEDIVKRYEGKGYGELKKEIGQTVFDFL 281


>gi|291536988|emb|CBL10100.1| Uncharacterized conserved protein [Roseburia intestinalis M50/1]
 gi|291539808|emb|CBL12919.1| Uncharacterized conserved protein [Roseburia intestinalis XB6B4]
          Length = 71

 Score = 39.4 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 16/73 (21%), Positives = 25/73 (34%), Gaps = 19/73 (26%)

Query: 339 ISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
           I I   E    + L   + KAG   S  +A+  ++   +K+N                  
Sbjct: 2   IEIQIRETDEFIKLGQALKKAGLVESGVDAKFVIQDGLVKVNGE---------------- 45

Query: 399 TGNIKLSFGKKNH 411
               +L  GKK H
Sbjct: 46  ---TELQRGKKIH 55


>gi|289168903|ref|YP_003447172.1| tryptophanyl-tRNA synthetase [Streptococcus mitis B6]
 gi|288908470|emb|CBJ23312.1| tryptophanyl-tRNA synthetase [Streptococcus mitis B6]
          Length = 341

 Score = 39.4 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 41/244 (16%), Positives = 70/244 (28%), Gaps = 42/244 (17%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKT--GHKPISLMGG---GTSIIGDPSFRDESRRMMRSQE 98
            T   LH GH    +    L +    +     +      T    DP              
Sbjct: 12  PTGK-LHIGHYVGSLKNRVLLQEVDKYDMFVFLADQQALTDHAKDPQ------------T 58

Query: 99  IQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
           I E+I  +  +    +     K+   + +    L  +    +     +    N  +  E 
Sbjct: 59  IVESIGNV-ALDYLAVGLDPSKSTIFIQSQIPELAELSMYYMNLVSLARLERNPTVKTEI 117

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
            +          FL   Y I QA D      NY   + +G +DQ   I    ++      
Sbjct: 118 AQKGFGESIPTGFL--VYPIAQAADITAFKANY---VPVG-TDQKPMIEQTREIVRSFNN 171

Query: 219 P-KLFALTSP-----------LLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNI- 264
                 L  P            L    G  KM K+L+  I+L  +  +     +   ++ 
Sbjct: 172 AYNCDVLVEPEGIYPENERAGRLPGLDGNAKMSKSLNNGIYLADDADT---LRKKVMSMY 228

Query: 265 DDAD 268
            D D
Sbjct: 229 TDPD 232


>gi|312199993|ref|YP_004020054.1| ribosomal protein S4 [Frankia sp. EuI1c]
 gi|311231329|gb|ADP84184.1| ribosomal protein S4 [Frankia sp. EuI1c]
          Length = 208

 Score = 39.4 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 9/43 (20%), Positives = 22/43 (51%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
            ++ +AGFA S + AR+ ++   +++N   +     ++   D 
Sbjct: 102 NVVYRAGFAPSRDAARQAVRHGHVQVNGGKVDIPSYRVSDNDI 144


>gi|154250888|ref|YP_001411712.1| lysyl-tRNA synthetase [Parvibaculum lavamentivorans DS-1]
 gi|154154838|gb|ABS62055.1| lysyl-tRNA synthetase [Parvibaculum lavamentivorans DS-1]
          Length = 539

 Score = 39.4 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 20/128 (15%), Positives = 37/128 (28%), Gaps = 15/128 (11%)

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           D+           +M G D   ++     +   L  P        L     G K+ K+  
Sbjct: 248 DWAMRWAALGVDYEMAGKDLIDSVKLASRICRVLGAPPPEGFNYELFLDEEGKKISKSKG 307

Query: 243 GAI----WL--NKEMTSPYNFWQ--------YWRNIDDADVVSFAKRLTTLPMSEIDRMA 288
             +    WL      +  Y  +Q        Y+  I   +V  +   L+  P  ++    
Sbjct: 308 NGLSIEDWLRYASPESLQYFMFQSPRAGKRLYFDVIP-RNVDEYLGALSAFPKQDVRERL 366

Query: 289 KLQGKEIN 296
                 I+
Sbjct: 367 NNAAFHIH 374


>gi|303256274|ref|ZP_07342290.1| tryptophan--tRNA ligase [Burkholderiales bacterium 1_1_47]
 gi|302861003|gb|EFL84078.1| tryptophan--tRNA ligase [Burkholderiales bacterium 1_1_47]
          Length = 440

 Score = 39.4 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 37/228 (16%), Positives = 73/228 (32%), Gaps = 31/228 (13%)

Query: 36  VTAYIGYDLTASSLHAGHLT-QLMLLFWLQKT-GHKPISLMGGGTSII--GDPSFRDESR 91
           V    G   + + LH G+    +       +  G +    +    ++I   DP   ++SR
Sbjct: 12  VRVLTGVTPSGT-LHLGNYVGAIRPAIQKSRAEGTESFYFLSDYHALIKTSDPDRVEKSR 70

Query: 92  RMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVN 151
             + +  +   ++  +  F              +LN  T    +          +    N
Sbjct: 71  IQIAATWLACGLDPKRVHFYRQSDLPETLELNWILNCVTSKGLMNRAH---AYKAKVEAN 127

Query: 152 RMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGID 211
                +        + +++   F Y IL A D +    N+   + +G  DQ  +I    D
Sbjct: 128 EAAGEDP-------DNNVTMGLFCYPILMAADILIFKANF---IPVG-RDQIQHIEMCRD 176

Query: 212 L-----GERLKTPKLFALT-------SPLLTTASGTKMGKTLSGAIWL 247
           +            ++F L        + +L    G KM K+    I L
Sbjct: 177 IATRFNQMYGNGEEIFPLPEALIDEDTAILPGLDGRKMSKSYDNVIPL 224


>gi|291277173|ref|YP_003516945.1| tryptophanyl-tRNA synthetase [Helicobacter mustelae 12198]
 gi|290964367|emb|CBG40217.1| tryptophanyl-tRNA synthetase [Helicobacter mustelae 12198]
          Length = 372

 Score = 39.4 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 32/192 (16%), Positives = 68/192 (35%), Gaps = 39/192 (20%)

Query: 147 FFSVNRMLSFESVR-SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGN 205
             ++  M      +    K  ++++   FNY  L A D +     Y   L   G DQ  +
Sbjct: 142 NIAMGEMSRMTQYKDKSQKNPKNINVGLFNYPALMAADILL----YQADLVPVGEDQKQH 197

Query: 206 IICGIDLGERLKT--PKLFALTSPLLTTASG---------TKMGKT---LSGAIWLNKEM 251
           +    ++ ++      + F +  P++               KM K+    + AI+L   M
Sbjct: 198 LELTRNVAQKFNRDFGECFKIPEPMIPKIGARVMGLDDPSVKMSKSHTGANHAIFL---M 254

Query: 252 TSPYNFWQYWRN-IDDAD--------------VVSFAKRLTTLPMSEIDRMAKLQGKEIN 296
            +P    + ++    D++              ++   +  + L    I+R     GK   
Sbjct: 255 DTPEEILKKFKKATTDSEGIIAFDENRPGVYNLLCMYETFSGLSRDAIERHF--DGKGYG 312

Query: 297 EAKKIIATEITT 308
           + KK +A  + +
Sbjct: 313 DLKKEVAELVIS 324


>gi|255514238|gb|EET90499.1| tryptophanyl-tRNA synthetase [Candidatus Micrarchaeum acidiphilum
           ARMAN-2]
          Length = 374

 Score = 39.4 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 39/214 (18%), Positives = 68/214 (31%), Gaps = 24/214 (11%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT-GHKPISLMGGGTSIIGDPS 85
           LD          Y G   +  S+  GHL   ++  WLQK  G +    +        +  
Sbjct: 64  LDEYEKGNRFYIYTGIAPSG-SMTVGHLIPFLMTLWLQKAFGAEVYIQIPD------EEK 116

Query: 86  FRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIG 145
           F  +    +  + I E          +   +   KT              +Y  +L    
Sbjct: 117 FLAKKDPALTLERIHELAYDDALNIIALG-FDPKKTKIFF--------DTEYASVL--YK 165

Query: 146 SFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQA----YDFVELAKNYDCRLQMGGSD 201
               V + ++F +V+  +      +  +  Y  +QA       VE   N  C + +   D
Sbjct: 166 QAVRVAKHITFSTVKDAMGFTNEDNIGKIFYTSMQAVPAFLKSVEEGHNVPCLIPL-AID 224

Query: 202 QWGNIICGIDLGERLKTPKLFALTSPLLTTASGT 235
           Q  +     D+  +L   K   L +  L    GT
Sbjct: 225 QDVHFRVARDVITKLGYYKPAILYAKFLPAFDGT 258


>gi|239980265|ref|ZP_04702789.1| tryptophanyl-tRNA synthetase [Streptomyces albus J1074]
 gi|291452129|ref|ZP_06591519.1| tryptophanyl-tRNA synthetase 1 [Streptomyces albus J1074]
 gi|291355078|gb|EFE81980.1| tryptophanyl-tRNA synthetase 1 [Streptomyces albus J1074]
          Length = 331

 Score = 39.4 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 35/245 (14%), Positives = 75/245 (30%), Gaps = 37/245 (15%)

Query: 35  VVTAYIGYDLTASSLHAGHLTQLMLLFWL---QKTGHKPISLMGGGTSIIGDPSFRDESR 91
           +   + G   T   L  G+      +       +     +  +    ++  D       R
Sbjct: 1   MTRVFSGIKPTG-HLTLGNYLG--AVRQWVERDQHRADALFCVVDLHALTVDHDPARVRR 57

Query: 92  RMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVN 151
                      + +              +    + ++      + Y+  L  + +   + 
Sbjct: 58  -----------LSRQAATLLLAAGLDPERCTVFVQSHVDEHARLSYL--LECVATDGEMR 104

Query: 152 RMLSFE--SVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICG 209
           RM+ ++  SV+ R +R  S+      Y +L A D +   +  +  +   G DQ  ++   
Sbjct: 105 RMIQYKEKSVKER-ERGGSVRLSLLTYPVLMAADILA-YRTDEVPV---GEDQTQHVELT 159

Query: 210 IDLGERLKT--PKLFAL---TSPLL------TTASGTKMGKTLSGAIWLNKEMTSPYNFW 258
            DL ER        F +   T+P +          G KMGK+      +   +  P    
Sbjct: 160 RDLAERFNQRYGPAFVVPRATNPPVGARVMDLQEPGAKMGKSHESGAGIIYLLDEPEVVR 219

Query: 259 QYWRN 263
           +    
Sbjct: 220 RKVMR 224


>gi|224008188|ref|XP_002293053.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220971179|gb|EED89514.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 1101

 Score = 39.4 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 22/116 (18%), Positives = 41/116 (35%), Gaps = 10/116 (8%)

Query: 261 WRNIDDADVVS-FAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTM------VHGR 313
            R+  D ++   + + L  L  ++I     +   E +EA K +  E   +       H R
Sbjct: 736 MRSKADGEMQKAYLRLLARLKAAKIVPKKHVLDNECSEAMKALIKETCQLELVPPGTHRR 795

Query: 314 EEAEKAATAAMECFDM--SIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNE 367
             AEKA     + F    +  +   P     +      M L  L+ +A    + + 
Sbjct: 796 NIAEKAIQTFKKHFIGILAGTADDFPLHLWDRLLPQAEMTL-NLLRQANARPTVSA 850


>gi|189485302|ref|YP_001956243.1| tryptophanyl-tRNA synthetase [uncultured Termite group 1 bacterium
           phylotype Rs-D17]
 gi|170287261|dbj|BAG13782.1| tryptophanyl-tRNA synthetase [uncultured Termite group 1 bacterium
           phylotype Rs-D17]
          Length = 323

 Score = 39.4 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 38/224 (16%), Positives = 69/224 (30%), Gaps = 39/224 (17%)

Query: 41  GYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGG---TSIIGDPSFRDESRRMMRS 96
           G   T   LH GH    LM     Q    +   +       T+   D S  +E       
Sbjct: 7   GMRPTGR-LHLGHYFGVLMNWVKFQNE-CECYYMSADWHVLTTSYVDTSAVNE----NTL 60

Query: 97  QEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSF 156
           + + + I        S     +G               + + +L   +     ++ +   
Sbjct: 61  EMVADWITAGVDPEKSVFFKQSGV--------------LYHSELFLILSMITPLSWLQRC 106

Query: 157 ESVRSRLKR--EQSLSFLEFN-YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLG 213
            + + ++ +   + LS   F  Y IL + D + L K     +   G DQ  ++     + 
Sbjct: 107 PTYKEQISQIKNKDLSNYGFLGYPILMSADIL-LYKANIVPI---GEDQLSHLELTRKIA 162

Query: 214 ERLKT-------PKLFALTSPL-LTTASGTKMGKTLSGAIWLNK 249
            R               LT    +    G KM K+   +I L +
Sbjct: 163 RRFNNFYGDTFIEPKEELTKAASVPGLDGRKMSKSYGNSILLGE 206


>gi|154490383|ref|ZP_02030644.1| hypothetical protein PARMER_00616 [Parabacteroides merdae ATCC
           43184]
 gi|154088994|gb|EDN88038.1| hypothetical protein PARMER_00616 [Parabacteroides merdae ATCC
           43184]
          Length = 204

 Score = 39.4 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 24/55 (43%), Gaps = 2/55 (3%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGK 408
            LI  +G   S  EA + ++   + +N S +     ++   D     +I++  GK
Sbjct: 10  KLISDSGLC-SRREADKFIEEGRVTVNGS-LPQVGQKVTEADIVMLDDIQIKIGK 62


>gi|322694573|gb|EFY86399.1| tryptophanyl-tRNA synthetase [Metarhizium acridum CQMa 102]
          Length = 480

 Score = 39.4 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 23/149 (15%), Positives = 44/149 (29%), Gaps = 25/149 (16%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSF 86
           LD    +     Y G   ++  +H GH+    L  WL      P+ +M   T        
Sbjct: 90  LDKHEKKEPFFIYTGRGPSSDIMHIGHMVPFQLAKWLSDVFEVPLIVM--LTDDEKYLMG 147

Query: 87  RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGS 146
           +         + ++E     +      I  G       + ++  ++      D  + I  
Sbjct: 148 KM-------DRTVEEYEHYARENAKDIIAVGFDPDRTFIFSDYEFMGG----DFYKNISR 196

Query: 147 FFSVNRMLSFESVRSRLKREQSLSFLEFN 175
                       +  R+ R  + S   FN
Sbjct: 197 ------------IAKRINRGTADSCFGFN 213


>gi|322435729|ref|YP_004217941.1| leucyl-tRNA synthetase [Acidobacterium sp. MP5ACTX9]
 gi|321163456|gb|ADW69161.1| leucyl-tRNA synthetase [Acidobacterium sp. MP5ACTX9]
          Length = 855

 Score = 39.4 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 17/124 (13%), Positives = 33/124 (26%), Gaps = 19/124 (15%)

Query: 210 IDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI----WLNKEMTSPYNFWQYWRNID 265
            DLG  +       L +  +    G KM K+    +     +++        +  +    
Sbjct: 591 RDLGLIVNDEPAERLFTQGMVIKDGAKMSKSKGNVVSPDLMIDRYGADATRMYALFAAPP 650

Query: 266 DAD--------------VVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVH 311
           D D              +    +  T     E           + +  + IA  +T    
Sbjct: 651 DRDLDWQEEGVAGISRFLGKIFRLTTKFAQLEGGEAGPADAALLRKLHQTIAK-VTHDFS 709

Query: 312 GREE 315
           GR  
Sbjct: 710 GRWH 713


>gi|262164550|ref|ZP_06032288.1| tryptophanyl-tRNA synthetase [Vibrio mimicus VM223]
 gi|262026930|gb|EEY45597.1| tryptophanyl-tRNA synthetase [Vibrio mimicus VM223]
          Length = 340

 Score = 39.4 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 36/220 (16%), Positives = 69/220 (31%), Gaps = 33/220 (15%)

Query: 45  TASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIE 104
           T   LH GH    +      +  H+   L+     +  +            S  I   + 
Sbjct: 20  TGP-LHLGHYVGSLKQRVALQDIHEQTILVADMQGLTDNAH-----NPKKVSSNILNVVA 73

Query: 105 KIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK 164
               +          KT   + +    L  +          +  +++R+    +V+S ++
Sbjct: 74  DYLAVG-----IDPIKTTICLQSQLPALAELTMY-----YSNLVTISRLERNPTVKSEIQ 123

Query: 165 R---EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK---T 218
               E+S+      Y I QA D       ++  L   G DQ   +    ++  ++     
Sbjct: 124 NKGFERSIPAGFLTYPISQAADI----TGFNATLVPVGDDQLPMLEQANEIVRKVNLLAG 179

Query: 219 PKLFALTSPLLTT------ASGT-KMGKTLSGAIWLNKEM 251
             +     PLL+         G  KM K++  AI L    
Sbjct: 180 RAVLNECRPLLSNASRLPSTDGKSKMSKSMGNAINLGASP 219


>gi|257066736|ref|YP_003152992.1| tryptophanyl-tRNA synthetase [Anaerococcus prevotii DSM 20548]
 gi|256798616|gb|ACV29271.1| tryptophanyl-tRNA synthetase [Anaerococcus prevotii DSM 20548]
          Length = 360

 Score = 39.4 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 54/365 (14%), Positives = 104/365 (28%), Gaps = 65/365 (17%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGH--KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +     +Q  G+  +   ++    ++  +     + R     + + 
Sbjct: 11  PTGR-LHLGHYVGSLKNRVIMQNEGNYDRMYIMIADSQALTDNFDDPGKIR-----ENLI 64

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           E       +          K    + +  + L  + +   L  +              ++
Sbjct: 65  EVALDYLSVG-----LDPEKVTFFVQSQVSELTELTFY-FLNLVTLSRLERNPTVKSEIK 118

Query: 161 SR-LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQW------------GNII 207
            R  +      FL   Y + QA D +     +D  +   G DQ              N I
Sbjct: 119 LRDFETSLPAGFL--IYPVSQAADILL----FDANIVPVGEDQEPMLEQAREIARSFNHI 172

Query: 208 CGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLN--KEMTSPYNFWQYW---- 261
            G    E         +   +     G KM K+L  AI+L   K+         Y     
Sbjct: 173 YGETFVEPKAVLPEAKIARRMPGIDGGAKMSKSLGNAIYLADDKKTVKKKVMSMYTDPDH 232

Query: 262 RNIDD------ADVVSFAKRLT-------TLPMSEIDRMAKLQ--GKEINEAK------K 300
            NI+D        V ++    +        LP  E     K       + + K      K
Sbjct: 233 INIEDPGKVEGNIVFTYLDVFSKPEHFKEFLPEYENLEALKDHYRRGGLGDVKVKKFLIK 292

Query: 301 IIATEITTMVHGREEAEK-AATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKA 359
           ++  E+  +   R E EK          + +  ++      + + + + G+         
Sbjct: 293 VLEDELEPIRKRRAEYEKDLEKVFKILEEGTAKAREAGRSKVEEVKKAMGINYFE---DE 349

Query: 360 GFATS 364
               S
Sbjct: 350 KLVKS 354


>gi|222447088|pdb|3FHJ|D Chain D, Independent Saturation Of Three Trprs Subsites Generates A
           Partially-Assembled State Similar To Those Observed In
           Molecular Simulations
          Length = 287

 Score = 39.4 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 42/213 (19%), Positives = 69/213 (32%), Gaps = 29/213 (13%)

Query: 143 EIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQ 202
           E+ +      ML        L+R   +S     Y  L A D +     Y+  +   G DQ
Sbjct: 82  EVPAHAQAAWMLQCIVYIGELERMTQVSAGLLTYPPLMAADILL----YNTDIVPVGEDQ 137

Query: 203 WGNIICGIDLGERLKT------PKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYN 256
             +I    DL ER  T      PK+ A    L+      KM K+          +     
Sbjct: 138 KQHIELTRDLAERFFTIPEARIPKVGARIMSLVDPT--KKMSKSDPNPKAYITLLDDAKT 195

Query: 257 FWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE--ITTMVHG-- 312
             +  ++     + +     +TL    I+ + +    + + A+ +I T   I    H   
Sbjct: 196 IEKKIKSA----ISNLLNIYSTLSGQSIEELERQYVFKADLAQVVIETLRPIQERYHHWM 251

Query: 313 ---------REEAEKAATAAMECFDMSIHSQHM 336
                     E AEKA   A E       +  +
Sbjct: 252 ESEELDRVLDEGAEKANRVASEMVRKMEQAMGL 284


>gi|123413422|ref|XP_001304275.1| tryptophanyl-tRNA synthetase [Trichomonas vaginalis G3]
 gi|121885715|gb|EAX91345.1| putative tryptophanyl-tRNA synthetase [Trichomonas vaginalis G3]
          Length = 393

 Score = 39.4 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 24/131 (18%), Positives = 43/131 (32%), Gaps = 14/131 (10%)

Query: 24  PRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGD 83
            + LD       V  Y G   ++ +LH GH+T  ++  ++Q               I  D
Sbjct: 61  EQILDAKEKGKQVYIYTGRGPSSDALHLGHITSFIINKYIQDA-----LDCWFIIQITDD 115

Query: 84  PSF-RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLR 142
             F RD     +  + I +  E         I  G       ++    W         L 
Sbjct: 116 EKFMRDND---LSWETIHKYTE---ANIRDIIAQGYDPERTFIMRESKWFN--ICQPFLG 167

Query: 143 EIGSFFSVNRM 153
           E+  + S++ +
Sbjct: 168 ELSRYMSLHTI 178


>gi|325971145|ref|YP_004247336.1| tryptophanyl-tRNA synthetase [Spirochaeta sp. Buddy]
 gi|324026383|gb|ADY13142.1| tryptophanyl-tRNA synthetase [Spirochaeta sp. Buddy]
          Length = 330

 Score = 39.4 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 35/231 (15%), Positives = 68/231 (29%), Gaps = 31/231 (13%)

Query: 43  DLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN 102
           D T   LH GH    +      +  +    L+    ++                + I   
Sbjct: 12  DRTTGRLHLGHYVGSLKSRVELQDSYDTFILLADVQALTTHFE---------HPELIN-- 60

Query: 103 IEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR 162
              I  +    +  G        +            +L        +VN++    +++  
Sbjct: 61  -SSIYDVTMDNLAVGLDPAKVTFVQQSQIT---SIAELTVFYSMIVTVNQLRHNPTIK-- 114

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNY-DCRLQMGGSDQWGNIICGIDLGERLKTPKL 221
               ++  + +  Y  L           + +  L   G DQ  +I     +  +      
Sbjct: 115 -TEAKNYGYADLTYGFLGYPVSQTADITFCNANLVPVGEDQVPHIELARKIVRKFNDLYG 173

Query: 222 FALTSP--------LLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
            ++  P         L+   G  KMGK+L  AI+L+    +P   W   RN
Sbjct: 174 TSIVEPEAKLSAVGRLSGLDGNAKMGKSLGNAIYLS---DTPETVWDRVRN 221


>gi|297625817|ref|YP_003687580.1| 30S ribosomal protein S4 [Propionibacterium freudenreichii subsp.
           shermanii CIRM-BIA1]
 gi|296921582|emb|CBL56136.1| 30S ribosomal protein S4 [Propionibacterium freudenreichii subsp.
           shermanii CIRM-BIA1]
          Length = 201

 Score = 39.4 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 22/45 (48%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
            ++ +AGFA++  +AR+ +    I +N   ++    ++   D   
Sbjct: 95  NVVYRAGFASTRRQARQMVSHGHILVNGKKVNIPSFRVAPLDIID 139


>gi|41152126|ref|NP_957066.1| tryptophanyl-tRNA synthetase, cytoplasmic [Danio rerio]
 gi|37590880|gb|AAH59603.1| Tryptophanyl-tRNA synthetase [Danio rerio]
          Length = 463

 Score = 39.4 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 15/60 (25%), Positives = 24/60 (40%), Gaps = 1/60 (1%)

Query: 15  RGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +  + LD    Q     Y G   ++ ++H GHL   +   WLQ     P+ +
Sbjct: 127 RGIFFSHRDMHQILDAFEQQKPFYLYTGRGPSSQAIHVGHLIPFIFTKWLQDVFDVPLVI 186


>gi|172058280|ref|YP_001814740.1| pseudouridine synthase [Exiguobacterium sibiricum 255-15]
 gi|171990801|gb|ACB61723.1| pseudouridine synthase [Exiguobacterium sibiricum 255-15]
          Length = 239

 Score = 39.4 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 1/46 (2%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           M L  L+   G A S  E ++ LKS AI+++  I+ + K  +  ++
Sbjct: 1   MRLDKLLSNMG-AGSRKEVKQLLKSGAIQVDGEIVYDPKQHVDTEN 45


>gi|330998969|ref|ZP_08322694.1| tryptophan--tRNA ligase [Parasutterella excrementihominis YIT
           11859]
 gi|329575711|gb|EGG57237.1| tryptophan--tRNA ligase [Parasutterella excrementihominis YIT
           11859]
          Length = 431

 Score = 39.4 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 37/228 (16%), Positives = 73/228 (32%), Gaps = 31/228 (13%)

Query: 36  VTAYIGYDLTASSLHAGHLT-QLMLLFWLQKT-GHKPISLMGGGTSII--GDPSFRDESR 91
           V    G   + + LH G+    +       +  G +    +    ++I   DP   ++SR
Sbjct: 3   VRVLTGVTPSGT-LHLGNYVGAIRPAIQKSRAEGTESFYFLSDYHALIKTSDPDRVEKSR 61

Query: 92  RMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVN 151
             + +  +   ++  +  F              +LN  T    +          +    N
Sbjct: 62  IQIAATWLACGLDPKRVHFYRQSDLPETLELNWILNCVTSKGLMNRAH---AYKAKVEAN 118

Query: 152 RMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGID 211
                +        + +++   F Y IL A D +    N+   + +G  DQ  +I    D
Sbjct: 119 EAAGEDP-------DNNVTMGLFCYPILMAADILIFKANF---IPVG-RDQIQHIEMCRD 167

Query: 212 L-----GERLKTPKLFALT-------SPLLTTASGTKMGKTLSGAIWL 247
           +            ++F L        + +L    G KM K+    I L
Sbjct: 168 IATRFNQMYGNGEEIFPLPEALIDEDTAILPGLDGRKMSKSYDNVIPL 215


>gi|308185001|ref|YP_003929134.1| tryptophanyl-tRNA synthetase [Helicobacter pylori SJM180]
 gi|308060921|gb|ADO02817.1| tryptophanyl-tRNA synthetase [Helicobacter pylori SJM180]
          Length = 326

 Score = 39.4 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 36/188 (19%), Positives = 63/188 (33%), Gaps = 39/188 (20%)

Query: 147 FFSVNRMLSFESVR-SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGN 205
             S+  M      +   LK  +S++   FNY IL A D +     Y   L   G DQ  +
Sbjct: 98  QVSMGEMQRMTQFKDKSLKNPKSVNVGLFNYPILMASDILL----YQSDLVPVGEDQKQH 153

Query: 206 IICGIDLGERLKT--PKLFALTSPLLTTASG---------TKMGKTLSG---AIWLNKEM 251
           +    ++ E+        F +  PL+               KM K+  G   AI+L   +
Sbjct: 154 LELTRNIAEKFNRDFGNCFKVPEPLIAKVGARVMGLDDPKVKMSKSHQGANHAIFL---L 210

Query: 252 TSPYNFWQYWRNIDDADV---------------VSFAKRLTTLPMSEIDRMAKLQGKEIN 296
             P    +  +      +               ++    L+     +I+   K +G    
Sbjct: 211 DEPDVIVKKIKKAATDSMGVIEFDEKREGIFNLLNIYMLLSDESPEKIEERFKNKG--YG 268

Query: 297 EAKKIIAT 304
           + KK +A 
Sbjct: 269 DFKKELAE 276


>gi|303240945|ref|ZP_07327456.1| ribosomal protein S4 [Acetivibrio cellulolyticus CD2]
 gi|302591531|gb|EFL61268.1| ribosomal protein S4 [Acetivibrio cellulolyticus CD2]
          Length = 208

 Score = 39.4 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 18/105 (17%), Positives = 42/105 (40%), Gaps = 14/105 (13%)

Query: 294 EINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLL 353
           ++ E +K          +G  E +       + F+M++  + +   ++ +    R   ++
Sbjct: 56  QLREKQKA------RRYYGVLEGQ-----FRKYFEMAVSKKGVTGDNLLQLLELRLDNVV 104

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
               + G ATS  EAR+ ++     +N   ++      KL D  +
Sbjct: 105 Y---RLGLATSRPEARQLVRHGHFTVNGKKVNIPSYLTKLGDAIA 146


>gi|257064663|ref|YP_003144335.1| SSU ribosomal protein S4P [Slackia heliotrinireducens DSM 20476]
 gi|256792316|gb|ACV22986.1| SSU ribosomal protein S4P [Slackia heliotrinireducens DSM 20476]
          Length = 198

 Score = 39.4 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 22/133 (16%), Positives = 49/133 (36%), Gaps = 14/133 (10%)

Query: 266 DADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAME 325
           D  V+ ++ +  ++   +  R       ++ E +K         ++G  E          
Sbjct: 18  DPVVLGYSSKKESIRQPQRRRKESEYALQLREKQKA------KFIYGVLE-----KQFRG 66

Query: 326 CFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIIS 385
            F     ++ MP I+           L  ++ + GFA +  EAR+ +    I +N   ++
Sbjct: 67  YFKK---AKAMPGITGENLMRILESRLDNVVFRLGFARTRKEARQTVSHGHIYVNGKRVN 123

Query: 386 NEKLQIKLQDFDS 398
               +++  D  S
Sbjct: 124 IPSYRVRPGDLVS 136


>gi|223938948|ref|ZP_03630834.1| hemolysin A [bacterium Ellin514]
 gi|223892375|gb|EEF58850.1| hemolysin A [bacterium Ellin514]
          Length = 252

 Score = 39.4 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 15/73 (20%), Positives = 25/73 (34%), Gaps = 8/73 (10%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD---FDSTGNIKLSFGKK- 409
             +V+ G   S  +ARR + +  + IN         ++K  D     S        G K 
Sbjct: 8   QALVERGLCESREKARRAIMAGQVTINQQPAKKPSDRVKQGDNIALASGDKYVSRGGLKM 67

Query: 410 ----NHIICHLCG 418
                H   ++ G
Sbjct: 68  EHALKHFALNVAG 80


>gi|329962610|ref|ZP_08300558.1| pseudouridylate synthase [Bacteroides fluxus YIT 12057]
 gi|328529641|gb|EGF56539.1| pseudouridylate synthase [Bacteroides fluxus YIT 12057]
          Length = 234

 Score = 39.4 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 11/62 (17%), Positives = 27/62 (43%), Gaps = 1/62 (1%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
             +  AG   S  EA   + +  + +N  +++    +IK  D     +  +S  +K +++
Sbjct: 3   KFLANAGVC-SRREADEFITAGVVSVNGEVVTELGTKIKRGDEVKFHDQAVSIERKIYVL 61

Query: 414 CH 415
            +
Sbjct: 62  LN 63


>gi|315640907|ref|ZP_07896003.1| tryptophan--tRNA ligase [Enterococcus italicus DSM 15952]
 gi|315483325|gb|EFU73825.1| tryptophan--tRNA ligase [Enterococcus italicus DSM 15952]
          Length = 338

 Score = 39.4 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 39/239 (16%), Positives = 70/239 (29%), Gaps = 48/239 (20%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
            T   LH GH    +      +   +    +     ++ D      +      +++ +N+
Sbjct: 13  PTGQ-LHLGHYVGSLKTRVAMQEDVENKLFI-----MVADVQ--ALTDNAKNPEKVAKNV 64

Query: 104 EKIKGIFSSFIKYG----TGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRM-----L 154
                     + Y       K   L + +       +  +L     +  SVNR+     +
Sbjct: 65  ------LQVALDYLAVGLDPKKSTLFVQS----QIPELAELTMYYANLVSVNRLKRNPTV 114

Query: 155 SFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
             E  + +        F  F Y I QA D      N    L   G DQ   +    ++  
Sbjct: 115 KAEIEQKQFGEGVPTGF--FIYPISQAADITAFKAN----LVPVGEDQKPMLEQTQEIVH 168

Query: 215 RLKTPKLFALTSPL----------LTTASGT-KMGKTLSGAIWL----NKEMTSPYNFW 258
              T     L +P           L    G  KM K+L   I+L    +       + +
Sbjct: 169 SFNTTYREVLVNPKAVLPPKGMGRLPGIDGNGKMSKSLGNGIYLADSADTLKKKVMSMY 227


>gi|310659475|ref|YP_003937196.1| 30S ribosomal protein S4 [Clostridium sticklandii DSM 519]
 gi|308826253|emb|CBH22291.1| 30S ribosomal subunit protein S4 [Clostridium sticklandii]
          Length = 207

 Score = 39.4 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 18/110 (16%), Positives = 41/110 (37%), Gaps = 14/110 (12%)

Query: 292 GKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMG 351
           G+++ E +K+        ++G  E +         F+ +   Q M   ++      R   
Sbjct: 54  GEQLREKQKV------KRIYGVLETQ-----FRLTFERAEKMQGMAGENLLNLLERRLDN 102

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
           ++    + G A S  EAR+ ++     +N    +   + I + D  +   
Sbjct: 103 VVY---RMGLAASRKEARQLVRHGHFNLNGHKANIPSMTISVGDVITVKE 149


>gi|295131962|ref|YP_003582638.1| tryptophanyl-tRNA synthetase [Zunongwangia profunda SM-A87]
 gi|294979977|gb|ADF50442.1| tryptophanyl-tRNA synthetase [Zunongwangia profunda SM-A87]
          Length = 322

 Score = 39.4 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 40/275 (14%), Positives = 80/275 (29%), Gaps = 42/275 (15%)

Query: 50  HAGHLTQLML--LFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIK 107
           H G+L   ++  +       +     +    S+        E+ R          +    
Sbjct: 15  HLGNLLGAIMPAIKMANSPENDSFIFIADMHSLTQIKD--AETLRNNTYSVAATWLACGI 72

Query: 108 GIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQ 167
            I  +     +    A  L   +W            +  FF   R+    S + +  R +
Sbjct: 73  DIEKTVFYRQSDIPQASEL---SWY-----------LSCFFPYQRLTLAHSFKDKADRLE 118

Query: 168 SLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSP 227
            ++   F Y +L A D +     YD  +   G DQ  ++    D+  R           P
Sbjct: 119 DVNAGLFTYPMLMAADILL----YDAEIVPVGKDQLQHLEITRDVASRFHAKMGETFVIP 174

Query: 228 ---------LLTTASGTKMGKTLSG--AIWLNKEMTSPYNFWQYWRNIDDAD-------- 268
                     +    G+KM K+      I+   +            +    +        
Sbjct: 175 EAKVEENILYVPGTDGSKMSKSKDNTVNIFQTDKKLRKQIMGIQTDSTPLEEPKNPDTCN 234

Query: 269 VVSFAKRL-TTLPMSEIDRMAKLQGKEINEAKKII 302
           V +  K L +    +E+ +  +  G     AK+ +
Sbjct: 235 VFNIYKLLGSEAQTAELRQKYEAGGFGYGHAKQAL 269


>gi|237786335|ref|YP_002907040.1| 30S ribosomal protein S4 [Corynebacterium kroppenstedtii DSM 44385]
 gi|259495271|sp|C4LKZ2|RS4_CORK4 RecName: Full=30S ribosomal protein S4
 gi|237759247|gb|ACR18497.1| 30S ribosomal protein S4 [Corynebacterium kroppenstedtii DSM 44385]
          Length = 201

 Score = 39.4 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 8/48 (16%), Positives = 19/48 (39%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
            ++ +AG A +  +AR+ +      +N   ++    Q+   D      
Sbjct: 95  NVVYRAGLARTRRQARQLVSHGHFTVNGKKVNVPSFQVSQYDIIDVRE 142


>gi|182685165|ref|YP_001836912.1| tryptophanyl-tRNA synthetase [Streptococcus pneumoniae CGSP14]
 gi|182630499|gb|ACB91447.1| tryptophanyl-tRNA synthetase [Streptococcus pneumoniae CGSP14]
          Length = 341

 Score = 39.4 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 36/241 (14%), Positives = 65/241 (26%), Gaps = 36/241 (14%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKT--GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +    L +    +     +    ++                + I  
Sbjct: 12  PTGK-LHIGHYVGSLKNRVLLQEEDKYDMFVFLADQQALTDHAKG-----PQTIVESIGN 65

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
                  +          K+   + +    L  +    +     +    N  +  E  + 
Sbjct: 66  VALDYLAVG-----LDPNKSTIFIQSQIPELAELSMYYMNLVSLARLERNPTVKTEISQK 120

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP-K 220
                    FL   Y I QA D      NY   + +G +DQ   I    ++         
Sbjct: 121 GFGESIPTGFL--VYPIAQAADITAFKANY---VPVG-TDQKPMIEQTREIVRSFNNAYN 174

Query: 221 LFALTSP-----------LLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNI-DDA 267
              L  P            L    G  KM K+L+  I+L  +  +     +   ++  D 
Sbjct: 175 CDVLVEPEGIYPENERAGRLPGLDGNAKMSKSLNNGIYLADDADT---LRKKVMSMYTDP 231

Query: 268 D 268
           D
Sbjct: 232 D 232


>gi|330950248|gb|EGH50508.1| tryptophanyl-tRNA synthetase [Pseudomonas syringae Cit 7]
          Length = 449

 Score = 39.4 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 20/108 (18%), Positives = 39/108 (36%), Gaps = 20/108 (18%)

Query: 156 FESVRSRLKREQ----SLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGID 211
             SV   ++  +     ++   ++Y  L A D + +   +   +   G DQ  ++    D
Sbjct: 112 KASVDKNVESGEDPDAGITMGLYSYPGLMAADIL-MFNAHQVPV---GRDQIQHVEMARD 167

Query: 212 LGERLK-----TPKLFAL-------TSPLLTTASGTKMGKTLSGAIWL 247
           +G+R         + F +       +   L    G KM K+    I L
Sbjct: 168 IGQRFNHLFGNGKEFFVMPEALIEESVATLPGLDGRKMSKSYDNTIPL 215


>gi|218128464|ref|ZP_03457268.1| hypothetical protein BACEGG_00034 [Bacteroides eggerthii DSM 20697]
 gi|217989355|gb|EEC55668.1| hypothetical protein BACEGG_00034 [Bacteroides eggerthii DSM 20697]
          Length = 234

 Score = 39.4 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 11/62 (17%), Positives = 27/62 (43%), Gaps = 1/62 (1%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
             +  AG   S  EA   + +  + +N  +++    +IK  D     +  +S  +K +++
Sbjct: 3   KFLANAGVC-SRREADEFITAGVVSVNGEVVTELGTKIKRGDEVKFHDQAVSIERKIYVL 61

Query: 414 CH 415
            +
Sbjct: 62  LN 63


>gi|182890772|gb|AAI65344.1| Wars protein [Danio rerio]
          Length = 463

 Score = 39.4 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 15/60 (25%), Positives = 24/60 (40%), Gaps = 1/60 (1%)

Query: 15  RGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +  + LD    Q     Y G   ++ ++H GHL   +   WLQ     P+ +
Sbjct: 127 RGIFFSHRDMHQILDAFEQQKPFYLYTGRGPSSQAIHVGHLIPFIFTKWLQDVFDVPLVI 186


>gi|55777372|gb|AAH49526.1| Tryptophanyl-tRNA synthetase [Danio rerio]
          Length = 463

 Score = 39.4 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 15/60 (25%), Positives = 24/60 (40%), Gaps = 1/60 (1%)

Query: 15  RGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +  + LD    Q     Y G   ++ ++H GHL   +   WLQ     P+ +
Sbjct: 127 RGIFFSHRDMHQILDAFEQQKPFYLYTGRGPSSQAIHVGHLIPFIFTKWLQDVFDVPLVI 186


>gi|319646564|ref|ZP_08000793.1| tryptophanyl-tRNA synthetase [Bacillus sp. BT1B_CT2]
 gi|317391152|gb|EFV71950.1| tryptophanyl-tRNA synthetase [Bacillus sp. BT1B_CT2]
          Length = 330

 Score = 39.4 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 52/345 (15%), Positives = 102/345 (29%), Gaps = 64/345 (18%)

Query: 35  VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMM 94
             T + G   +  S+  G+    M  F   +  +     +    + I  P  R   R+  
Sbjct: 2   KKTIFSGIQPSG-SVTLGNYIGAMKQFVDLQDDYNCYFCIVDQHA-ITVPQDRLALRK-- 57

Query: 95  RSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRML 154
                      I+ + + ++  G     A +          +   +L+ +     + RM 
Sbjct: 58  ----------NIRNLAALYLAVGLDPKKATLFIQSEVPAHAQAGWMLQCVAYIGELERMT 107

Query: 155 SFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
                + +   ++++      Y  L A D +     Y   +   G DQ  ++    +L E
Sbjct: 108 Q---YKDKSAGKEAVVSGLLTYPPLMAADILL----YGTDVVPVGEDQKQHLELTRNLAE 160

Query: 215 RLKTPKLFALTSPLLTTAS-G----------TKMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
           R         T P +     G           KM K+          +  P    +  ++
Sbjct: 161 RFNKKYNDIFTVPEVKIPKVGARIMSLADPLKKMSKSDPNQKAFITLLDDPKQLEKKIKS 220

Query: 264 -IDDAD------------VVSFAKRLTTLPMSEIDR-MAKLQGKEINEAKKIIATEIT-- 307
            + D+D            V +     + L    I+   AK +GK   E K  +A  +   
Sbjct: 221 AVTDSDGIVKYDKENKPGVSNLLTIYSILGQVSIEELEAKYEGKGYGEFKSDLAEVVIGA 280

Query: 308 -----TMVHG-----------REEAEKAATAAMECFDMSIHSQHM 336
                   H             E AE+A   A +      ++  +
Sbjct: 281 LKPIQDRYHELIESEELDRILDEGAERANQTANKMLKKMENAMGL 325


>gi|315427720|dbj|BAJ49316.1| small subunit ribosomal protein S4e [Candidatus Caldiarchaeum
           subterraneum]
          Length = 238

 Score = 39.4 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 9/47 (19%), Positives = 19/47 (40%), Gaps = 6/47 (12%)

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDS------TGNIKLSFGK 408
           ARR +K     ++  ++ + +  + L D  S         + +  GK
Sbjct: 54  ARRLIKQGKFMVDGRVVKDPRFPLGLMDVLSIPELGENYRVLIKPGK 100


>gi|253998286|ref|YP_003050349.1| leucyl-tRNA synthetase [Methylovorus sp. SIP3-4]
 gi|253984965|gb|ACT49822.1| leucyl-tRNA synthetase [Methylovorus sp. SIP3-4]
          Length = 826

 Score = 39.4 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 20/124 (16%), Positives = 37/124 (29%), Gaps = 12/124 (9%)

Query: 203 WGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWR 262
           + N +   D+G          L +  +    G+KM K+    +    +  +    +    
Sbjct: 549 FFNKLM-RDVGLLKNDEPFNKLLTQGMVLKDGSKMSKSKGNTV----DPQALIEQYG--- 600

Query: 263 NIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATA 322
               AD           P   ++             K++ A     + HG   A  AAT+
Sbjct: 601 ----ADTARLFMMFAAPPEQSLEWSDAGVEGAHRFLKRVWAAVAAHVEHGVVSAYSAATS 656

Query: 323 AMEC 326
             E 
Sbjct: 657 TGEL 660


>gi|229494843|ref|ZP_04388596.1| pseudouridine synthase, Rsu [Rhodococcus erythropolis SK121]
 gi|229318201|gb|EEN84069.1| pseudouridine synthase, Rsu [Rhodococcus erythropolis SK121]
          Length = 354

 Score = 39.4 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 8/49 (16%), Positives = 23/49 (46%), Gaps = 1/49 (2%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
             G+ L  ++ +AG   S   A   +    ++++  I+  + L++  ++
Sbjct: 111 GDGVRLQKVLAQAG-VASRRAAEELIDQGRVEVDGRIVVEQGLRVDPEN 158


>gi|145294850|ref|YP_001137671.1| tryptophanyl-tRNA synthetase [Corynebacterium glutamicum R]
 gi|140844770|dbj|BAF53769.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 345

 Score = 39.4 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 35/248 (14%), Positives = 74/248 (29%), Gaps = 38/248 (15%)

Query: 21  ISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSI 80
            +  ++L    +  V++   G   TA S H G+    +  +   +  +     +    +I
Sbjct: 2   TTQDKDLTAQTASRVLS---GIQPTADSYHLGNYLGAVKQWIDLQDSYDAFYFIPDLHAI 58

Query: 81  IGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDL 140
             D             +E++           +       ++   + ++      + +  +
Sbjct: 59  TVD----------QEPEELRNRTISGAAQLLALG-IDPERSTLFVQSHVPAHAELSW--V 105

Query: 141 LREIGSFFSVNRMLS-FESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGG 199
           L  +  F   +RM    +    R     S     F Y +L A D + L + +   +   G
Sbjct: 106 LTCLTGFGEASRMTQFKDKSSKRGADRTSAGL--FTYPMLMAADIL-LYRPHLVPV---G 159

Query: 200 SDQWGNIICGIDLGERLKTPKLFALTSPLLTT--ASG-----------TKMGKTLSGAIW 246
            DQ  ++     L ER      F     +       G            KM K+      
Sbjct: 160 EDQRQHLELTRTLAERFNNR--FGKAFEVPEGFIPQGASKIYDLQNPTAKMSKSGDNPKG 217

Query: 247 LNKEMTSP 254
           +   +  P
Sbjct: 218 IINLLDDP 225


>gi|23007931|ref|ZP_00049587.1| COG1187: 16S rRNA uridine-516 pseudouridylate synthase and related
           pseudouridylate synthases [Magnetospirillum
           magnetotacticum MS-1]
          Length = 179

 Score = 39.4 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 9/50 (18%), Positives = 23/50 (46%), Gaps = 1/50 (2%)

Query: 348 RGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
            G  +   I +AG A S  +A   +++  + +N  ++++  + +   D  
Sbjct: 20  EGERIAKAIARAGIA-SRRDAEALIEAGRVTLNGQVLTSPAINVTDSDRI 68


>gi|307705896|ref|ZP_07642734.1| tryptophanyl-tRNA synthetase [Streptococcus mitis SK597]
 gi|322377915|ref|ZP_08052403.1| tryptophan--tRNA ligase [Streptococcus sp. M334]
 gi|307620557|gb|EFN99655.1| tryptophanyl-tRNA synthetase [Streptococcus mitis SK597]
 gi|321281091|gb|EFX58103.1| tryptophan--tRNA ligase [Streptococcus sp. M334]
          Length = 341

 Score = 39.4 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 41/244 (16%), Positives = 70/244 (28%), Gaps = 42/244 (17%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKT--GHKPISLMGG---GTSIIGDPSFRDESRRMMRSQE 98
            T   LH GH    +    L +    +     +      T    DP              
Sbjct: 12  PTGK-LHIGHYVGSLKNRVLLQEEDKYDMFVFLADQQALTDHAKDPQ------------T 58

Query: 99  IQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
           I E+I  +  +    +     K+   + +    L  +    +     +    N  +  E 
Sbjct: 59  IVESIGNV-ALDYLAVGLDPSKSTIFIQSQIPELAELSMYYMNLVSLARLERNPTVKTEI 117

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
            +          FL   Y I QA D      NY   + +G +DQ   I    ++      
Sbjct: 118 AQKGFGESIPTGFL--VYPIAQAADITAFKANY---VPVG-TDQKPMIEQTREIVRSFNN 171

Query: 219 P-KLFALTSP-----------LLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNI- 264
                 L  P            L    G  KM K+L+  I+L  +  +     +   ++ 
Sbjct: 172 AYNCDVLVEPEGIYPENERAGRLPGLDGNAKMSKSLNNGIYLADDADT---LRKKVMSMY 228

Query: 265 DDAD 268
            D D
Sbjct: 229 TDPD 232


>gi|168335041|ref|ZP_02693154.1| 30S ribosomal protein S4 [Epulopiscium sp. 'N.t. morphotype B']
          Length = 196

 Score = 39.4 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 17/42 (40%)

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
           GFA ST +AR+ +      IN   +      +K  D  +   
Sbjct: 98  GFARSTRQARQMVNHGHFLINGQKVDRPSYALKEGDTITLKE 139


>gi|315425862|dbj|BAJ47515.1| small subunit ribosomal protein S4e [Candidatus Caldiarchaeum
           subterraneum]
          Length = 238

 Score = 39.4 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 9/47 (19%), Positives = 19/47 (40%), Gaps = 6/47 (12%)

Query: 368 ARRHLKSNAIKINNSIISNEKLQIKLQDFDS------TGNIKLSFGK 408
           ARR +K     ++  ++ + +  + L D  S         + +  GK
Sbjct: 54  ARRLIKQGKFMVDGRVVKDPRFPLGLMDVLSIPELGENYRVLIKPGK 100


>gi|225377587|ref|ZP_03754808.1| hypothetical protein ROSEINA2194_03237 [Roseburia inulinivorans DSM
           16841]
 gi|225210563|gb|EEG92917.1| hypothetical protein ROSEINA2194_03237 [Roseburia inulinivorans DSM
           16841]
          Length = 71

 Score = 39.4 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 14/73 (19%), Positives = 27/73 (36%), Gaps = 19/73 (26%)

Query: 339 ISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
           I+++  E    + L   + KAG   S  +A+  ++   +K+N                  
Sbjct: 2   ITVNIRETDEFIKLGQALKKAGLVESGVDAKFFIQDGQVKLNGE---------------- 45

Query: 399 TGNIKLSFGKKNH 411
               +L  GKK +
Sbjct: 46  ---TELQRGKKLY 55


>gi|83591842|ref|YP_425594.1| lysyl-tRNA synthetase [Rhodospirillum rubrum ATCC 11170]
 gi|83574756|gb|ABC21307.1| lysyl-tRNA synthetase [Rhodospirillum rubrum ATCC 11170]
          Length = 550

 Score = 39.4 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 15/76 (19%), Positives = 26/76 (34%), Gaps = 8/76 (10%)

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI----WL 247
               +M G D   ++     +   L      +LT  L     G K+ K+    +    WL
Sbjct: 261 GVDYEMSGKDLIDSVKLSSRICRILGGEPPQSLTYELFLDGQGQKISKSKGNGLSVEDWL 320

Query: 248 ---NKEMTSPYNFWQY 260
              N E  + +  +Q 
Sbjct: 321 RYANPESLALF-MYQK 335


>gi|19551907|ref|NP_599909.1| tryptophanyl-tRNA synthetase [Corynebacterium glutamicum ATCC
           13032]
 gi|62389566|ref|YP_224968.1| tryptophanyl-tRNA synthetase [Corynebacterium glutamicum ATCC
           13032]
 gi|25009421|sp|Q8NSJ4|SYW_CORGL RecName: Full=Tryptophanyl-tRNA synthetase; AltName:
           Full=Tryptophan--tRNA ligase; Short=TrpRS
 gi|21323443|dbj|BAB98070.1| Tryptophanyl-tRNA synthetase [Corynebacterium glutamicum ATCC
           13032]
 gi|41324900|emb|CAF19382.1| TRYPTOPHAN TRNA SYNTHETASE [Corynebacterium glutamicum ATCC 13032]
          Length = 345

 Score = 39.4 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 35/248 (14%), Positives = 74/248 (29%), Gaps = 38/248 (15%)

Query: 21  ISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSI 80
            +  ++L    +  V++   G   TA S H G+    +  +   +  +     +    +I
Sbjct: 2   TTQDKDLTAQTASRVLS---GIQPTADSYHLGNYLGAVKQWIDLQDSYDAFYFIPDLHAI 58

Query: 81  IGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDL 140
             D             +E++           +       ++   + ++      + +  +
Sbjct: 59  TVD----------QEPEELRNRTISGAAQLLALG-IDPERSTLFVQSHVPAHAELSW--V 105

Query: 141 LREIGSFFSVNRMLS-FESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGG 199
           L  +  F   +RM    +    R     S     F Y +L A D + L + +   +   G
Sbjct: 106 LTCLTGFGEASRMTQFKDKSSKRGADRTSAGL--FTYPMLMAADIL-LYRPHLVPV---G 159

Query: 200 SDQWGNIICGIDLGERLKTPKLFALTSPLLTT--ASG-----------TKMGKTLSGAIW 246
            DQ  ++     L ER      F     +       G            KM K+      
Sbjct: 160 EDQRQHLELTRTLAERFNNR--FGKAFEVPEGFIPQGASKIYDLQNPTAKMSKSGDNPKG 217

Query: 247 LNKEMTSP 254
           +   +  P
Sbjct: 218 IINLLDDP 225


>gi|225570327|ref|ZP_03779352.1| hypothetical protein CLOHYLEM_06424 [Clostridium hylemonae DSM
           15053]
 gi|225160859|gb|EEG73478.1| hypothetical protein CLOHYLEM_06424 [Clostridium hylemonae DSM
           15053]
          Length = 69

 Score = 39.4 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 11/54 (20%), Positives = 21/54 (38%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG 400
              + L   +  AG   S  EA+  ++   +K+N    +    ++   D  S G
Sbjct: 8   EEFIKLGQALKAAGLVDSGVEAKEVIQDGLVKVNGETDTRRGRKLHAGDVVSFG 61


>gi|195970192|ref|NP_384985.2| hypothetical protein SMc00973 [Sinorhizobium meliloti 1021]
 gi|307304209|ref|ZP_07583961.1| hemolysin A [Sinorhizobium meliloti BL225C]
 gi|307320514|ref|ZP_07599929.1| hemolysin A [Sinorhizobium meliloti AK83]
 gi|187904153|emb|CAC45451.2| Probable hemolysin [Sinorhizobium meliloti 1021]
 gi|306893790|gb|EFN24561.1| hemolysin A [Sinorhizobium meliloti AK83]
 gi|306902677|gb|EFN33270.1| hemolysin A [Sinorhizobium meliloti BL225C]
          Length = 251

 Score = 39.4 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 7/38 (18%), Positives = 17/38 (44%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNE 387
           + L  L++  G   S   AR  ++   +K++   ++  
Sbjct: 9   IRLDQLLLNRGLVASRARARDAIQRGTVKVDGRTVTKP 46


>gi|124004676|ref|ZP_01689520.1| tryptophanyl-tRNA synthetase [Microscilla marina ATCC 23134]
 gi|123989799|gb|EAY29328.1| tryptophanyl-tRNA synthetase [Microscilla marina ATCC 23134]
          Length = 329

 Score = 39.4 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 21/100 (21%), Positives = 36/100 (36%), Gaps = 24/100 (24%)

Query: 174 FNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK---TPKLFA------- 223
           F Y +L A D +     YD  +   G DQ  ++     + +R+      ++F        
Sbjct: 130 FTYPMLMAADILL----YDADVVPVGKDQKQHLEFTRFVAKRINNHYGEEIFVLPEARID 185

Query: 224 ---LTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQY 260
              +T P      G KM K+ +  I    +M  P    + 
Sbjct: 186 ADLMTIP---GTDGRKMSKSYNNYI----DMFLPKGKLKK 218


>gi|332878090|ref|ZP_08445820.1| pseudouridylate synthase [Capnocytophaga sp. oral taxon 329 str.
           F0087]
 gi|332684052|gb|EGJ56919.1| pseudouridylate synthase [Capnocytophaga sp. oral taxon 329 str.
           F0087]
          Length = 253

 Score = 39.4 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 11/71 (15%), Positives = 30/71 (42%), Gaps = 1/71 (1%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           +    + L   +  AG   S  EA   + +  + +N ++++    ++K  D        +
Sbjct: 13  DPDAPIRLNKFLANAGVC-SRREADEFITAGVVSVNGTVVTELGTKVKRTDEVKFHEQPV 71

Query: 405 SFGKKNHIICH 415
           S  +K +++ +
Sbjct: 72  SIERKVYVLLN 82


>gi|296533931|ref|ZP_06896455.1| ribosomal large subunit pseudouridine synthase B [Roseomonas
           cervicalis ATCC 49957]
 gi|296265748|gb|EFH11849.1| ribosomal large subunit pseudouridine synthase B [Roseomonas
           cervicalis ATCC 49957]
          Length = 267

 Score = 39.4 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 11/68 (16%), Positives = 27/68 (39%), Gaps = 7/68 (10%)

Query: 342 SKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
            + +  +G  +   + +AG A S  +A + +    + +N  ++      ++  D  +   
Sbjct: 3   EEQDGPKGERIAKWLARAGIA-SRRDAEKLIAEGQVAVNGRVLDGPASFVQPGDSVTVS- 60

Query: 402 IKLSFGKK 409
                GKK
Sbjct: 61  -----GKK 63


>gi|284034842|ref|YP_003384773.1| tryptophanyl-tRNA synthetase [Kribbella flavida DSM 17836]
 gi|283814135|gb|ADB35974.1| tryptophanyl-tRNA synthetase [Kribbella flavida DSM 17836]
          Length = 340

 Score = 39.4 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 35/223 (15%), Positives = 67/223 (30%), Gaps = 32/223 (14%)

Query: 41  GYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGG---TSIIGDPSFRDESRRMMRS 96
           G   T    H G+L   +     L  + +  +  +      T +      R  +R +  +
Sbjct: 14  GIKPTGDP-HLGNLIGAIRPALQLADS-YDAMYFIADYHALTVLRDPEQMRYYTRSVAAT 71

Query: 97  QEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSF 156
                    +     +  +         +     W+ S      L      +   R  + 
Sbjct: 72  ----WIAAGLDTNRITMYRQSDVPETFEL----HWVLSCVSAKGLMNRAHAYKAARDKNA 123

Query: 157 ESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL 216
           E+ +S L    ++    +NY +L A D + +  +    +   G DQ  ++    D+    
Sbjct: 124 EAGKSDLDAGVNMGL--YNYPVLMAADILLMDSD----VVPVGKDQSQHVEYAADIAGTF 177

Query: 217 K------TPKLFALTSP------LLTTASGTKMGKTLSGAIWL 247
                    K+  L  P       L    G KM K+    I L
Sbjct: 178 NHLFGEDKLKVPRLVLPEDDAAKTLPGIDGRKMSKSYGNTIPL 220


>gi|256830514|ref|YP_003159242.1| 30S riboosomal protein S4 [Desulfomicrobium baculatum DSM 4028]
 gi|256579690|gb|ACU90826.1| ribosomal protein S4 [Desulfomicrobium baculatum DSM 4028]
          Length = 208

 Score = 39.4 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 27/56 (48%), Gaps = 4/56 (7%)

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
           K GFA S ++AR+ ++     +N   ++   +Q+K  D     +      KKN +I
Sbjct: 106 KLGFANSRSQARQMVRHGLFSLNGRRVNVPSIQMKSGDVLEVRD----RTKKNLVI 157


>gi|296121037|ref|YP_003628815.1| tryptophanyl-tRNA synthetase [Planctomyces limnophilus DSM 3776]
 gi|296013377|gb|ADG66616.1| tryptophanyl-tRNA synthetase [Planctomyces limnophilus DSM 3776]
          Length = 325

 Score = 39.4 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 24/111 (21%), Positives = 38/111 (34%), Gaps = 17/111 (15%)

Query: 148 FSVNRMLSFE---SVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWG 204
            +V +M   E   + + ++ R        F Y +L A D +     YD  +   G DQ  
Sbjct: 93  MTVTQMSLLEKCHAYKDKVARGIPADAGLFTYPVLMAADILA----YDSEVVPVGVDQVQ 148

Query: 205 NIICGIDL-GER---LKTPKLFALTSPLLT------TASGTKMGKTLSGAI 245
           +I    D+            L   T+ +L          G KM K+    I
Sbjct: 149 HIEVTRDVAQRFNSFYGGEFLKLPTARVLDDSAKVVGTDGEKMSKSYGNTI 199


>gi|297562093|ref|YP_003681067.1| ribosomal protein S4 [Nocardiopsis dassonvillei subsp. dassonvillei
           DSM 43111]
 gi|296846541|gb|ADH68561.1| ribosomal protein S4 [Nocardiopsis dassonvillei subsp. dassonvillei
           DSM 43111]
          Length = 203

 Score = 39.4 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 23/55 (41%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
              + L T++++AG A S   AR+ +    I ++   +     Q+K     S   
Sbjct: 89  ELELRLATVVLRAGLAASIYAARQFVNHGHITVDGKKVDIPSYQVKPGQIISVRE 143


>gi|206900201|ref|YP_002250765.1| hemolysin A [Dictyoglomus thermophilum H-6-12]
 gi|206739304|gb|ACI18362.1| hemolysin A [Dictyoglomus thermophilum H-6-12]
          Length = 271

 Score = 39.4 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 16/61 (26%), Positives = 29/61 (47%), Gaps = 6/61 (9%)

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK--LSFG----K 408
           L+VK GF  S  +A+  + +  +K+N +I++   L+I +            +S G    K
Sbjct: 10  LLVKRGFFESREKAKAAIIAGVVKVNGNIVTKPDLKIPVDSLIEIKETIPYVSKGGFKLK 69

Query: 409 K 409
           K
Sbjct: 70  K 70


>gi|260432570|ref|ZP_05786541.1| tryptophanyl-tRNA synthetase [Silicibacter lacuscaerulensis
           ITI-1157]
 gi|260416398|gb|EEX09657.1| tryptophanyl-tRNA synthetase [Silicibacter lacuscaerulensis
           ITI-1157]
          Length = 333

 Score = 39.4 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 38/220 (17%), Positives = 69/220 (31%), Gaps = 29/220 (13%)

Query: 45  TASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIE 104
           T   LH GH    +      +  H+   L+    ++  +   R++ RR +    +     
Sbjct: 13  TGP-LHIGHYAGSLANRLRYQGSHEQFLLLADTQALTDNTHDREKVRRSVMEVALDYLAV 71

Query: 105 KIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR-L 163
            I             +T   + ++   L  +  +  L  +            + +R+R  
Sbjct: 72  GI----------DPSRTTICLQSHLPALAELSML-YLNFVTVARLERNPTIKDEIRARGF 120

Query: 164 KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT----- 218
            R+    FL   Y   QA D       +   +   G DQ   I    ++  R+       
Sbjct: 121 GRDIPAGFL--CYPAAQAADI----TGFKATVVPVGEDQAPLIEQTNEIVRRINATAGRL 174

Query: 219 --PKLFALTSPL--LTTASGT-KMGKTLSGAIWLNKEMTS 253
             P+  A+      L    G  KM K+   AI L+     
Sbjct: 175 VLPEARAIIPNAGRLPGVDGKAKMSKSGGNAIPLSASPNE 214


>gi|222447089|pdb|3FHJ|B Chain B, Independent Saturation Of Three Trprs Subsites Generates A
           Partially-Assembled State Similar To Those Observed In
           Molecular Simulations
          Length = 292

 Score = 39.4 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 39/223 (17%), Positives = 67/223 (30%), Gaps = 39/223 (17%)

Query: 143 EIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQ 202
           E+ +      ML        L+R   +S     Y  L A D +     Y+  +   G DQ
Sbjct: 77  EVPAHAQAAWMLQCIVYIGELERMTQVSAGLLTYPPLMAADILL----YNTDIVPVGEDQ 132

Query: 203 WGNIICGIDLGERLKT------PKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYN 256
             +I    DL ER          ++ +L  P        KM K+          +     
Sbjct: 133 KQHIELTRDLAERFNKRYFTIPERIMSLVDPT------KKMSKSDPNPKAYITLLDDAKT 186

Query: 257 FWQYWRNIDDAD----VVSFAKRLTTLPMSEIDRMAKL-QGKEINEAKKIIATEIT---- 307
             +  ++ +       + +     +TL    I+ + +  +GK     K  +A  +     
Sbjct: 187 IEKKIKSSEGTIRYPGISNLLNIYSTLSGQSIEELERQYEGKGYGVFKADLAQVVIETLR 246

Query: 308 ---TMVHG-----------REEAEKAATAAMECFDMSIHSQHM 336
                 H             E AEKA   A E       +  +
Sbjct: 247 PIQERYHHWMESEELDRVLDEGAEKANRVASEMVRKMEQAMGL 289


>gi|149185513|ref|ZP_01863829.1| tryptophanyl-tRNA synthetase [Erythrobacter sp. SD-21]
 gi|148830733|gb|EDL49168.1| tryptophanyl-tRNA synthetase [Erythrobacter sp. SD-21]
          Length = 350

 Score = 39.4 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 38/231 (16%), Positives = 71/231 (30%), Gaps = 51/231 (22%)

Query: 41  GYDLTASSLHAGHLT-QLMLLFWLQK---------------TGHKPISLMGGGTSIIGDP 84
           G   T + LH G+    +     +Q                  ++ +  +    + I  P
Sbjct: 6   GIQPTGN-LHLGNYLGAIRNWVRMQDDMEDANLAQAAEGGSAHNQCLFFLADLHA-ISMP 63

Query: 85  SFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREI 144
               E ++             I    S           A +     WL        L   
Sbjct: 64  HDPAELKKGTLEMAAALVACGIDPAKSVLFNQAQVPQHAEL----QWL--------LGGT 111

Query: 145 GSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWG 204
                +NRM  ++    + +  QS++   F Y +LQA D + L +     +   G DQ  
Sbjct: 112 ARMGWLNRMTQWKDKAGKNREGQSVAL--FTYPVLQAADVL-LYQATHVPV---GEDQKQ 165

Query: 205 NIICGIDLGERL------KTPKLFALTSPLLT--------TASG-TKMGKT 240
           ++    D+ ++       +   +F L  P++            G  KM K+
Sbjct: 166 HLELARDIAQKFNNDFASEDAPVFTLPDPIVPPQAARIMSLRDGSKKMSKS 216


>gi|294787974|ref|ZP_06753218.1| S4 RNA-binding domain protein [Simonsiella muelleri ATCC 29453]
 gi|294484267|gb|EFG31950.1| S4 RNA-binding domain protein [Simonsiella muelleri ATCC 29453]
          Length = 77

 Score = 39.4 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 13/60 (21%), Positives = 24/60 (40%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           E    + L  L+  AG   S  +A+  + S  +  N  +   +  +I+  D     N+ L
Sbjct: 8   EEQEYIALCDLLKLAGLVESGGQAKNAIASGKVLRNGKVEIRKTAKIRGGDVIEFSNVIL 67


>gi|284006805|emb|CBA72072.1| conserved hypothetical protein [Arsenophonus nasoniae]
          Length = 70

 Score = 39.4 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 8/57 (14%), Positives = 22/57 (38%)

Query: 340 SISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
            I   +    + L  L+   G   S   A+  +    +K++  + + ++ +I   + 
Sbjct: 2   EIFHLDGQPYIKLCDLLKLQGLVESGAAAKTLIAQGEVKVDGKVETRKRCKISKNNI 58


>gi|221319479|ref|ZP_03600773.1| RluB [Bacillus subtilis subsp. subtilis str. JH642]
 gi|221323755|ref|ZP_03605049.1| RluB [Bacillus subtilis subsp. subtilis str. SMY]
 gi|255767501|ref|NP_390197.2| pseudouridine synthase [Bacillus subtilis subsp. subtilis str. 168]
 gi|321311788|ref|YP_004204075.1| pseudouridine synthase [Bacillus subtilis BSn5]
 gi|251757325|sp|P35159|RLUB_BACSU RecName: Full=Ribosomal large subunit pseudouridine synthase B;
           AltName: Full=rRNA pseudouridylate synthase B; AltName:
           Full=rRNA-uridine isomerase B
 gi|225185129|emb|CAB14248.2| pseudouridine synthase [Bacillus subtilis subsp. subtilis str. 168]
 gi|291484745|dbj|BAI85820.1| pseudouridine synthase [Bacillus subtilis subsp. natto BEST195]
 gi|320018062|gb|ADV93048.1| pseudouridine synthase [Bacillus subtilis BSn5]
          Length = 244

 Score = 39.4 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 11/55 (20%), Positives = 24/55 (43%), Gaps = 1/55 (1%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
           L  +I  AG   S  +A   +K   +K+N  +++   +++   D      +K+  
Sbjct: 4   LQKVIAHAG-VASRRKAEELIKEGKVKVNGKVVTELGVKVTGSDQIEVNGLKVER 57


>gi|225165488|ref|ZP_03727314.1| ribosomal protein S4 [Opitutaceae bacterium TAV2]
 gi|224800265|gb|EEG18669.1| ribosomal protein S4 [Opitutaceae bacterium TAV2]
          Length = 202

 Score = 39.4 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 10/51 (19%), Positives = 22/51 (43%), Gaps = 3/51 (5%)

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
            ++ L+   GFA S   AR+ +    +++N   +      +++ D     N
Sbjct: 96  SIIYLL---GFARSRAAARQLVGHGHVRVNGHKVDIASYAVQVGDELEIKN 143


>gi|296332250|ref|ZP_06874712.1| pseudouridine synthase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305674952|ref|YP_003866624.1| pseudouridine synthase [Bacillus subtilis subsp. spizizenii str.
           W23]
 gi|296150564|gb|EFG91451.1| pseudouridine synthase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305413196|gb|ADM38315.1| pseudouridine synthase [Bacillus subtilis subsp. spizizenii str.
           W23]
          Length = 244

 Score = 39.4 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 11/55 (20%), Positives = 24/55 (43%), Gaps = 1/55 (1%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
           L  +I  AG   S  +A   +K   +K+N  +++   +++   D      +K+  
Sbjct: 4   LQKVIAHAG-VASRRKAEELIKEGKVKVNGKVVTELGVKVTGSDQIEVNGLKVER 57


>gi|260773125|ref|ZP_05882041.1| tryptophanyl-tRNA synthetase [Vibrio metschnikovii CIP 69.14]
 gi|260612264|gb|EEX37467.1| tryptophanyl-tRNA synthetase [Vibrio metschnikovii CIP 69.14]
          Length = 340

 Score = 39.4 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 39/221 (17%), Positives = 70/221 (31%), Gaps = 39/221 (17%)

Query: 45  TASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMR-SQEIQENI 103
           T   LH GH    +      +  H+   L+     +       D +    + S  I   +
Sbjct: 20  TGP-LHLGHYVGSLKQRVALQDIHEQTVLVADMQGL------TDNAHNPNKVSSNILNVV 72

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL 163
                +          KT   + +    L  +          +  +++R+    +V+S +
Sbjct: 73  ADYLAVG-----IDPCKTTICLQSQLPALAELTMY-----YSNLVTISRLERNPTVKSEI 122

Query: 164 KR---EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQ------------WGNIIC 208
           +    E+S+      Y I QA D       ++  L   G DQ              N++ 
Sbjct: 123 QSKGFERSIPAGFLTYPISQAADI----TGFNATLVPVGDDQLPMLEQTNEIVRKINLLA 178

Query: 209 GIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
           G       +   L +  S L +T    KM KT+   I L  
Sbjct: 179 GR--IVLNECRPLLSNASRLPSTDGKNKMSKTMGNTINLGA 217


>gi|225621236|ref|YP_002722494.1| pseudouridylate synthase [Brachyspira hyodysenteriae WA1]
 gi|225216056|gb|ACN84790.1| pseudouridylate synthase [Brachyspira hyodysenteriae WA1]
          Length = 229

 Score = 39.4 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 10/33 (30%), Positives = 17/33 (51%)

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
            S  EA R +++  +K+N  I +N   Q+   D
Sbjct: 13  ASRREADRLIQNGNVKVNGIINTNPATQVDEND 45


>gi|166712972|ref|ZP_02244179.1| pseudouridylate synthase [Xanthomonas oryzae pv. oryzicola BLS256]
          Length = 236

 Score = 39.4 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 10/53 (18%), Positives = 21/53 (39%)

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLS 405
           L   V A F  S  EA+R+++   + ++  ++   +            +  LS
Sbjct: 7   LDKCVAAAFGCSRGEAQRYIEGGWVSVDGVVVEEPQAPATAAQITLADDAVLS 59


>gi|288818043|ref|YP_003432390.1| ribosomal protein S4 [Hydrogenobacter thermophilus TK-6]
 gi|288787442|dbj|BAI69189.1| ribosomal protein S4 [Hydrogenobacter thermophilus TK-6]
 gi|308751644|gb|ADO45127.1| ribosomal protein S4 [Hydrogenobacter thermophilus TK-6]
          Length = 209

 Score = 39.4 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 13/66 (19%), Positives = 27/66 (40%), Gaps = 8/66 (12%)

Query: 340 SISKDEVSRGMGLLTLI--------VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
             SK + + G  LL L+         + G A +  +AR+ +    I +N   +     ++
Sbjct: 80  EASKAKGNTGQVLLQLLERRLDNVVYRLGMAVTRRQARQMIAHGHILVNGKKVDIPSYRV 139

Query: 392 KLQDFD 397
           ++ D  
Sbjct: 140 QVGDII 145


>gi|253682663|ref|ZP_04863460.1| ribosomal protein S4 [Clostridium botulinum D str. 1873]
 gi|253562375|gb|EES91827.1| ribosomal protein S4 [Clostridium botulinum D str. 1873]
          Length = 206

 Score = 39.4 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 12/61 (19%), Positives = 23/61 (37%), Gaps = 8/61 (13%)

Query: 349 GMGLLTLI--------VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG 400
           G  LL L+         + GF +S +EAR+ +      +N   +     ++   D  +  
Sbjct: 89  GENLLKLLEMRLDNVVYRLGFGSSRSEARQLVTHGHFLVNGKKVDIASFKVSAGDVITVR 148

Query: 401 N 401
            
Sbjct: 149 E 149


>gi|226303561|ref|YP_002763519.1| hypothetical protein RER_00720 [Rhodococcus erythropolis PR4]
 gi|226182676|dbj|BAH30780.1| conserved hypothetical protein [Rhodococcus erythropolis PR4]
          Length = 115

 Score = 39.4 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 13/68 (19%), Positives = 28/68 (41%), Gaps = 4/68 (5%)

Query: 333 SQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
           + ++P + I +DE+   + L   +  A    S  EA+  +    + +N  +      Q++
Sbjct: 42  TDNIPAVPI-RDEM---IRLGQFLKLANLIESGAEAKEVIADGMVSVNGEVEDRRGRQLR 97

Query: 393 LQDFDSTG 400
             D    G
Sbjct: 98  DGDVVEIG 105


>gi|89099642|ref|ZP_01172516.1| 16S pseudouridylate synthase [Bacillus sp. NRRL B-14911]
 gi|89085585|gb|EAR64712.1| 16S pseudouridylate synthase [Bacillus sp. NRRL B-14911]
          Length = 239

 Score = 39.4 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 22/45 (48%), Gaps = 1/45 (2%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
           M +  ++   G+  S  E ++ LK  ++ +N+  I + K  +  +
Sbjct: 1   MRIDKVLANLGY-GSRKEVKKLLKDGSVTVNDEKIKDAKQHVDPE 44


>gi|218961715|ref|YP_001741490.1| Tryptophanyl-tRNA synthetase [Candidatus Cloacamonas
           acidaminovorans]
 gi|167730372|emb|CAO81284.1| Tryptophanyl-tRNA synthetase [Candidatus Cloacamonas
           acidaminovorans]
          Length = 331

 Score = 39.4 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 31/223 (13%), Positives = 67/223 (30%), Gaps = 39/223 (17%)

Query: 41  GYDLTA-SSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIG--DPSFRDESRRMMRSQ 97
           G   T     H G+    +          +    +    ++    DP       + M  +
Sbjct: 8   GIKPTGIP--HIGNYLGAIKPALKLSETCEARYFIADYHALNACKDP----VELKKMTVE 61

Query: 98  EIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLS-F 156
                +             G    + L         + + + +L        +NR  +  
Sbjct: 62  IASAWLAC-----------GLDPKNTLFYRQSDVPETFELLTILMAFTPKGLMNRAHAYK 110

Query: 157 ESVRSRLKREQ----SLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL 212
             V++ L+  +     ++   F Y +L A D +     +D      G+DQ+ +I    D+
Sbjct: 111 AMVQNNLEANKDPDDGVNMGLFTYPVLMAADILL----FDTDFVPVGTDQFQHIEMAQDI 166

Query: 213 GERLK---TPKLFALTSPL-------LTTASGTKMGKTLSGAI 245
            +        +   +  P+       +    G KM K+ +  I
Sbjct: 167 AQSFNYVYKTQALKIPQPIAQEDTKTVVGLDGRKMSKSYNNTI 209


>gi|152989357|ref|YP_001350347.1| tryptophanyl-tRNA synthetase [Pseudomonas aeruginosa PA7]
 gi|150964515|gb|ABR86540.1| tryptophanyl-tRNA synthetase [Pseudomonas aeruginosa PA7]
          Length = 448

 Score = 39.4 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 30/199 (15%), Positives = 60/199 (30%), Gaps = 35/199 (17%)

Query: 166 EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-----TPK 220
           +  ++   ++Y +L A D +    +   ++ +G  DQ  ++    D+G+R         +
Sbjct: 126 DAGVTMGLYSYPVLMAADILMFNAH---KIPVG-RDQVQHVEMARDIGQRFNHLFGNGRE 181

Query: 221 LFAL-------TSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNID-------D 266
            F L       +   L    G KM K+    I L        +                D
Sbjct: 182 FFVLPEAVIEESVATLPGLDGRKMSKSYDNTIPLFSSSRQLKDAIARIVTDSRAPGEAKD 241

Query: 267 ADVVSFAKRLT-TLPMSEID--RMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAA 323
            D        +      ++   R   L G    EAK+ +   +       +E  +A    
Sbjct: 242 PDNSHLFTLYSAFASSEQVATFRQELLAGLAWGEAKQRLFQLL------DDELGEARERY 295

Query: 324 MECFDMSIHSQHMPTISIS 342
                       +  I ++
Sbjct: 296 QALIAK---PDDIEDILLA 311


>gi|83944398|ref|ZP_00956852.1| lysyl-tRNA synthetase [Sulfitobacter sp. EE-36]
 gi|83844721|gb|EAP82604.1| lysyl-tRNA synthetase [Sulfitobacter sp. EE-36]
          Length = 526

 Score = 39.4 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 16/84 (19%), Positives = 24/84 (28%), Gaps = 4/84 (4%)

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            DF       D   +M G D   N      +   L        T  L     G K+ K+ 
Sbjct: 236 PDFGARWAALDVDFEMYGKDHSTNTPIYDKICRILGNRPPEHFTYELFLDQDGHKISKSS 295

Query: 242 SGAI----WLNKEMTSPYNFWQYW 261
              +    WL        +++ Y 
Sbjct: 296 GNGLTIDEWLTYASAESLSYFMYL 319


>gi|322491894|emb|CBZ27167.1| putative tryptophanyl-tRNA synthetase [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 412

 Score = 39.0 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 22/131 (16%), Positives = 42/131 (32%), Gaps = 17/131 (12%)

Query: 15  RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLM 74
           R     + +     I   +  V  Y G   +A ++H GH+   ML  +LQ         +
Sbjct: 79  RDLHKALVDIEA-SIKTGERSVFLYTGRGPSAGTMHLGHVLPFMLTKYLQD--------V 129

Query: 75  GGGTSIIGDPSFRDESRRMMRSQEIQENI---EKIKGIFSSFIKYGTGKTDALMLNNETW 131
                +I       +  + +      E     E I+      I +        +  N  +
Sbjct: 130 FDLPLVIQI----TDDEKFLFRDVPFEGAKADELIRSNIKDIIAFDFSPRHTFIFRNTHY 185

Query: 132 LCSIKYIDLLR 142
           +  + Y  +LR
Sbjct: 186 MGHM-YPTVLR 195


>gi|296126048|ref|YP_003633300.1| RNA-binding S4 domain protein [Brachyspira murdochii DSM 12563]
 gi|296017864|gb|ADG71101.1| RNA-binding S4 domain protein [Brachyspira murdochii DSM 12563]
          Length = 227

 Score = 39.0 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 9/34 (26%), Positives = 17/34 (50%)

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
             S  EA + +++  +KIN  + +N   Q+   D
Sbjct: 12  IASRREADKLIQNGNVKINGIVNTNPAYQVSNDD 45


>gi|227522363|ref|ZP_03952412.1| tryptophanyl-tRNA synthetase II [Lactobacillus hilgardii ATCC 8290]
 gi|227090473|gb|EEI25785.1| tryptophanyl-tRNA synthetase II [Lactobacillus hilgardii ATCC 8290]
          Length = 338

 Score = 39.0 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 36/244 (14%), Positives = 81/244 (33%), Gaps = 52/244 (21%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     LQ +G ++   ++    ++       D +R     ++I+ 
Sbjct: 12  PTGK-LHIGHYVGSLKNRVELQNSGDYETFIMIADMQAL------TDNAR---DPEKIRH 61

Query: 102 NIEKIKGIFSSFIKYG----TGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRM---- 153
           ++          + Y       +   +++ +          +L +   +  +V+R+    
Sbjct: 62  SL------IQVALDYLAVGIDPEKSTILVQS----QIPALPELTQHYSNLVTVSRLNRNP 111

Query: 154 -LSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL 212
            +  E  +    +   + F    Y I QA D           + +G  DQ   +    ++
Sbjct: 112 TVKNEIKQKNFGQSVPVGFE--MYPISQAADITAFKA---TTVPVG-DDQEPMLEQTREI 165

Query: 213 GERLKTP-KLFALTSP----------LLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQY 260
                +  K   L  P           +    G  KM K+L  AI+L+ +  +     + 
Sbjct: 166 VRSFNSIYKADILVEPEGYFPPKGMGRIPGLDGNAKMSKSLGNAIYLSDDEDT---ISKK 222

Query: 261 WRNI 264
             ++
Sbjct: 223 VMSM 226


>gi|209886355|ref|YP_002290212.1| pseudouridine synthase, Rsu [Oligotropha carboxidovorans OM5]
 gi|209874551|gb|ACI94347.1| pseudouridine synthase, Rsu [Oligotropha carboxidovorans OM5]
          Length = 693

 Score = 39.0 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 10/56 (17%), Positives = 22/56 (39%), Gaps = 1/56 (1%)

Query: 342 SKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
            K     G  +  ++ +AG   S  +A   +    + +N  +I +  L +  +D  
Sbjct: 358 PKKADKSGERIAKVVARAGLC-SRRDAEDWIMQGRVAVNGRVIGSPALDVTARDVI 412


>gi|163852397|ref|YP_001640440.1| lysyl-tRNA synthetase [Methylobacterium extorquens PA1]
 gi|163664002|gb|ABY31369.1| lysyl-tRNA synthetase [Methylobacterium extorquens PA1]
          Length = 582

 Score = 39.0 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 20/154 (12%), Positives = 42/154 (27%), Gaps = 7/154 (4%)

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            D+           +M G D   ++     +   L           L     G K+ K+ 
Sbjct: 259 PDWAMRWVALGVDYEMAGKDLIDSVKLSGQIARALGAEPPEGFNYELFLDEKGQKISKSK 318

Query: 242 SGAIWLNK--EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK-EINEA 298
              + +++     +P +   +  N          +    +    +D      G+    EA
Sbjct: 319 GNGLTIDEWLTYATPESLALFMYNKP----REAKRLFFDVIPRNVDEYDNFLGRFAGQEA 374

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIH 332
           K  I   +  +  G   A +    A       + 
Sbjct: 375 KHRIGNPVWHLHAGAPPAVETIDEAGTTLSFGML 408


>gi|146296859|ref|YP_001180630.1| hemolysin A [Caldicellulosiruptor saccharolyticus DSM 8903]
 gi|145410435|gb|ABP67439.1| hemolysin A [Caldicellulosiruptor saccharolyticus DSM 8903]
          Length = 270

 Score = 39.0 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 13/38 (34%), Positives = 19/38 (50%)

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
           L+V+ GFA S  +AR  + S  + +NN  I      I 
Sbjct: 8   LLVEKGFAESREKARALILSGNVYVNNQKIEKAGELID 45


>gi|307711207|ref|ZP_07647629.1| tryptophanyl-tRNA synthetase [Streptococcus mitis SK321]
 gi|307617169|gb|EFN96347.1| tryptophanyl-tRNA synthetase [Streptococcus mitis SK321]
          Length = 341

 Score = 39.0 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 41/244 (16%), Positives = 70/244 (28%), Gaps = 42/244 (17%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKT--GHKPISLMGG---GTSIIGDPSFRDESRRMMRSQE 98
            T   LH GH    +    L +    +     +      T    DP              
Sbjct: 12  PTGK-LHIGHYVGSLKNRVLLQEEDKYDMFVFLADQQALTDHAKDPQ------------T 58

Query: 99  IQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
           I E+I  +  +    +     K+   + +    L  +    +     +    N  +  E 
Sbjct: 59  IVESIGNV-ALDYLAVGLDPSKSTIFIQSQIPELAELSMYYMNLVSLARLERNPTVKTEI 117

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
            +          FL   Y I QA D      NY   + +G +DQ   I    ++      
Sbjct: 118 AQKGFGESIPTGFL--VYPIAQAADITAFKANY---VPVG-TDQKPMIEQTREIVRSFNN 171

Query: 219 P-KLFALTSP-----------LLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNI- 264
                 L  P            L    G  KM K+L+  I+L  +  +     +   ++ 
Sbjct: 172 AYNCDVLVEPEGIYPENERAGRLPGLDGNAKMSKSLNNGIYLADDADT---LRKKVMSMY 228

Query: 265 DDAD 268
            D D
Sbjct: 229 TDPD 232


>gi|269792512|ref|YP_003317416.1| hemolysin A [Thermanaerovibrio acidaminovorans DSM 6589]
 gi|269100147|gb|ACZ19134.1| hemolysin A [Thermanaerovibrio acidaminovorans DSM 6589]
          Length = 269

 Score = 39.0 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 10/27 (37%), Positives = 18/27 (66%)

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINN 381
           L+VK G A S +EAR  +++  ++I+ 
Sbjct: 7   LLVKRGLARSRDEARELIETGLVRIDG 33


>gi|262401912|ref|ZP_06078477.1| tryptophanyl-tRNA synthetase [Vibrio sp. RC586]
 gi|262351884|gb|EEZ01015.1| tryptophanyl-tRNA synthetase [Vibrio sp. RC586]
          Length = 338

 Score = 39.0 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 25/136 (18%), Positives = 48/136 (35%), Gaps = 20/136 (14%)

Query: 140 LLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGG 199
           +L        ++RM  F+   +R   + +     F Y +L A D + L   +   +   G
Sbjct: 94  VLNCYTQMGELSRMTQFKDKSARYANDVNTGL--FGYPVLMAADIL-LYGAHQVPV---G 147

Query: 200 SDQWGNIICGIDLGERLKT---PKLFALTSP----------LLTTASGTK-MGKTLSGAI 245
           SDQ  ++    D+  R      P+    T P          +++    TK M K+     
Sbjct: 148 SDQKQHLELARDIATRFNNIYSPEQPIFTIPEPYIPTVNARVMSLQDATKKMSKSDDNPK 207

Query: 246 WLNKEMTSPYNFWQYW 261
            +   +  P +  +  
Sbjct: 208 NVITLLEDPKSIIKKI 223


>gi|256821686|ref|YP_003145649.1| 30S ribosomal protein S4 [Kangiella koreensis DSM 16069]
 gi|256795225|gb|ACV25881.1| ribosomal protein S4 [Kangiella koreensis DSM 16069]
          Length = 206

 Score = 39.0 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 28/63 (44%), Gaps = 8/63 (12%)

Query: 347 SRGMGLLTLI--------VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
           + G+ LL L+         + G+A +  EAR+ +   AI IN   ++     +K +D  S
Sbjct: 85  ATGVNLLQLLESRLDNVVYRMGYAATRGEARQLVSHKAILINGETVNIPSYTVKAEDVVS 144

Query: 399 TGN 401
              
Sbjct: 145 VRE 147


>gi|171463677|ref|YP_001797790.1| tryptophanyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           necessarius STIR1]
 gi|171193215|gb|ACB44176.1| tryptophanyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           necessarius STIR1]
          Length = 400

 Score = 39.0 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 23/147 (15%), Positives = 49/147 (33%), Gaps = 21/147 (14%)

Query: 133 CSIKYIDLLREIGSFFSVNRMLSFES--------VRSRLKREQSLSFLEFNYMILQAYDF 184
             + ++++ RE+   F  N +   E            +L  +++  + E      +  D 
Sbjct: 152 DQVPHVEMTREVARRF--NYLYGREPGFEEKALEAVKKLGSKRAKMYAELRVAFQERGDD 209

Query: 185 VELAKNYDCRLQMGGS------DQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMG 238
             L +     LQ   S      ++    + G       + P+    T+  +    G KM 
Sbjct: 210 EALEQAK-ALLQEAQSLSMADRERLFGFLEGARKIILPE-PQALLTTASRMPGIDGQKMS 267

Query: 239 KTLSGAIWLNKEMTSPYNFWQYWRNID 265
           K+    I + +    P +  Q  R + 
Sbjct: 268 KSYGNTISIREN---PEDVIQKIRTMP 291


>gi|95930497|ref|ZP_01313233.1| RNA-binding S4 [Desulfuromonas acetoxidans DSM 684]
 gi|95133537|gb|EAT15200.1| RNA-binding S4 [Desulfuromonas acetoxidans DSM 684]
          Length = 206

 Score = 39.0 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 14/89 (15%), Positives = 30/89 (33%), Gaps = 3/89 (3%)

Query: 320 ATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKI 379
                  FD    ++ M  ++     V     L  ++ + G A++ +EAR  ++     +
Sbjct: 68  EKQFRRVFDK---AKAMKGVTGHNMLVLLERRLDNMVFRLGLASTRSEARLFVRHGHFLV 124

Query: 380 NNSIISNEKLQIKLQDFDSTGNIKLSFGK 408
           N   +      ++  D           GK
Sbjct: 125 NGRKVDIPSYLVRAGDVIEVREKSRKIGK 153


>gi|257387888|ref|YP_003177661.1| ribosomal protein S4E, central domain protein [Halomicrobium
           mukohataei DSM 12286]
 gi|257170195|gb|ACV47954.1| Ribosomal protein S4E, central domain protein [Halomicrobium
           mukohataei DSM 12286]
          Length = 265

 Score = 39.0 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 28/53 (52%), Gaps = 1/53 (1%)

Query: 347 SRGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
             G+ LL ++    G+  S  EAR  L ++++ IN   +S+E+  + + D  +
Sbjct: 34  EAGVPLLIVLRDVLGYVDSRKEARYALNNDSVLINGKAVSDEERPVGMFDILA 86


>gi|221314557|ref|ZP_03596362.1| pseudouridine synthase [Bacillus subtilis subsp. subtilis str. NCIB
           3610]
          Length = 229

 Score = 39.0 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 11/55 (20%), Positives = 24/55 (43%), Gaps = 1/55 (1%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
           L  +I  AG   S  +A   +K   +K+N  +++   +++   D      +K+  
Sbjct: 4   LQKVIAHAG-VASRRKAEELIKEGKVKVNGKVVTELGVKVTGSDQIEVNGLKVER 57


>gi|164686335|ref|ZP_02210365.1| hypothetical protein CLOBAR_02773 [Clostridium bartlettii DSM
           16795]
 gi|164601937|gb|EDQ95402.1| hypothetical protein CLOBAR_02773 [Clostridium bartlettii DSM
           16795]
          Length = 1037

 Score = 39.0 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 25/135 (18%), Positives = 45/135 (33%), Gaps = 23/135 (17%)

Query: 169 LSFLEFNYMILQAYDFVELA-KNYDCRLQMGGSDQ---WGNIICGIDLGERLKTPKLFAL 224
           + F + +Y       F  L   +Y C     G DQ   W   +  I      K P    L
Sbjct: 527 MPFAQHHYPFENKEKFERLFPADYICE----GIDQTRGWFYSLLAISTFVMGKAPYKNVL 582

Query: 225 TSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEI 284
            + L+   +G KM K+    +        P+  +  +     AD + +     + P + I
Sbjct: 583 VNDLVLDKNGKKMSKSKGNTV-------DPFELFDKY----GADALRWYLLYVSPPWTPI 631

Query: 285 DRMAKLQGKEINEAK 299
               +     + E +
Sbjct: 632 ----RFDEAGLREIQ 642


>gi|225849518|ref|YP_002729683.1| 30S ribosomal protein S4 [Sulfurihydrogenibium azorense Az-Fu1]
 gi|225644198|gb|ACN99248.1| ribosomal protein S4 [Sulfurihydrogenibium azorense Az-Fu1]
          Length = 204

 Score = 39.0 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 14/70 (20%), Positives = 26/70 (37%), Gaps = 8/70 (11%)

Query: 340 SISKDEVSRGMGLLTLI--------VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
             SK   + G+ LL L+         + GFA +  +AR+ +K     +N   +     ++
Sbjct: 76  EASKKAGNTGVVLLQLLERRLDNVVYRLGFAKTRQQARQLVKHGHFTVNGKKVDIPSYRV 135

Query: 392 KLQDFDSTGN 401
              D      
Sbjct: 136 DAGDIIEVRE 145


>gi|212218098|ref|YP_002304885.1| 30S ribosomal protein S4 [Coxiella burnetii CbuK_Q154]
 gi|226697829|sp|B6J5F6|RS4_COXB1 RecName: Full=30S ribosomal protein S4
 gi|212012360|gb|ACJ19740.1| SSU ribosomal protein S4P [Coxiella burnetii CbuK_Q154]
          Length = 206

 Score = 39.0 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 27/59 (45%), Gaps = 8/59 (13%)

Query: 347 SRGMGLLTLI--------VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
           S G  LL L+         + GF+ +  EAR+ +   AI +N  +++    Q+K  D  
Sbjct: 85  STGDNLLKLLESRLDNVVYRMGFSATRAEARQLISHKAILVNGEVVNIPSYQVKPGDII 143


>gi|161349358|ref|ZP_02096742.1| ribosomal protein S4 [Coxiella burnetii 'MSU Goat Q177']
 gi|164601574|gb|EDQ95165.1| ribosomal protein S4 [Coxiella burnetii 'MSU Goat Q177']
          Length = 206

 Score = 39.0 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 27/59 (45%), Gaps = 8/59 (13%)

Query: 347 SRGMGLLTLI--------VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
           S G  LL L+         + GF+ +  EAR+ +   AI +N  +++    Q+K  D  
Sbjct: 85  STGDNLLKLLESRLDNVVYRMGFSATRAEARQLISHKAILVNGEVVNIPSYQVKPGDII 143


>gi|68536849|ref|YP_251554.1| 30S ribosomal protein S4 [Corynebacterium jeikeium K411]
 gi|260579207|ref|ZP_05847097.1| 30S ribosomal protein S4 [Corynebacterium jeikeium ATCC 43734]
 gi|90101685|sp|Q4JTC1|RS4_CORJK RecName: Full=30S ribosomal protein S4
 gi|68264448|emb|CAI37936.1| 30S ribosomal protein S4 [Corynebacterium jeikeium K411]
 gi|258602693|gb|EEW15980.1| 30S ribosomal protein S4 [Corynebacterium jeikeium ATCC 43734]
          Length = 201

 Score = 39.0 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 7/48 (14%), Positives = 19/48 (39%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
            ++ +AG A +  +AR+ +      +N   ++    ++   D      
Sbjct: 95  NVVYRAGLARTRRQARQLVSHGHFTVNGKKVNVPSFKVSQYDIIDVRE 142


>gi|83953439|ref|ZP_00962161.1| lysyl-tRNA synthetase [Sulfitobacter sp. NAS-14.1]
 gi|83842407|gb|EAP81575.1| lysyl-tRNA synthetase [Sulfitobacter sp. NAS-14.1]
          Length = 526

 Score = 39.0 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 16/84 (19%), Positives = 24/84 (28%), Gaps = 4/84 (4%)

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            DF       D   +M G D   N      +   L        T  L     G K+ K+ 
Sbjct: 236 PDFGARWAALDVDFEMYGKDHSTNTPIYDKICRILGNRPPEHFTYELFLDQDGHKISKSS 295

Query: 242 SGAI----WLNKEMTSPYNFWQYW 261
              +    WL        +++ Y 
Sbjct: 296 GNGLTIDEWLTYASAESLSYFMYL 319


>gi|210623214|ref|ZP_03293653.1| hypothetical protein CLOHIR_01603 [Clostridium hiranonis DSM 13275]
 gi|210153751|gb|EEA84757.1| hypothetical protein CLOHIR_01603 [Clostridium hiranonis DSM 13275]
          Length = 207

 Score = 39.0 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 20/118 (16%), Positives = 42/118 (35%), Gaps = 30/118 (25%)

Query: 292 GKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMG 351
           G+++ E +K+        ++G  E +         ++    ++ MP           G  
Sbjct: 54  GEQLREKQKV------KRIYGVLETQ-----FRNLYER---AEKMPG--------KTGAN 91

Query: 352 LLTLI--------VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
           LL+L+         + G A S  EAR+ +      +N   +    L + + D  +   
Sbjct: 92  LLSLLERRLDNVVYRMGLAASRKEARQLVTHAHFTLNGKKVDIPSLTVNVGDVIAVKE 149


>gi|315022583|gb|EFT35609.1| Ribosomal large subunit pseudouridine synthase B [Riemerella
           anatipestifer RA-YM]
          Length = 311

 Score = 39.0 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 9/40 (22%), Positives = 19/40 (47%), Gaps = 1/40 (2%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           I  +G   S  EA   ++   ++IN  +++    Q++  D
Sbjct: 85  IANSGIC-SRREADELIQQGLVEINGKVVTELGYQVQKTD 123


>gi|313205697|ref|YP_004044874.1| ribosomal large subunit pseudouridine synthase b [Riemerella
           anatipestifer DSM 15868]
 gi|312445013|gb|ADQ81368.1| ribosomal large subunit pseudouridine synthase B [Riemerella
           anatipestifer DSM 15868]
 gi|325336858|gb|ADZ13132.1| 16S rRNA uridine-516 pseudouridylate synthase related
           pseudouridylate synthase [Riemerella anatipestifer
           RA-GD]
          Length = 311

 Score = 39.0 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 9/40 (22%), Positives = 19/40 (47%), Gaps = 1/40 (2%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           I  +G   S  EA   ++   ++IN  +++    Q++  D
Sbjct: 85  IANSGIC-SRREADELIQQGLVEINGKVVTELGYQVQKTD 123


>gi|320333945|ref|YP_004170656.1| tryptophanyl-tRNA synthetase [Deinococcus maricopensis DSM 21211]
 gi|319755234|gb|ADV66991.1| tryptophanyl-tRNA synthetase [Deinococcus maricopensis DSM 21211]
          Length = 329

 Score = 39.0 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 26/157 (16%), Positives = 45/157 (28%), Gaps = 37/157 (23%)

Query: 174 FNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSP------ 227
             Y +L A D + L K     +   G DQ  +I    ++  R      +  T P      
Sbjct: 127 LMYPVLMAADIL-LYKADTIPV---GEDQTQHIELTREIARRFN--HTYGDTFPEPKAVY 180

Query: 228 -----LLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDA-------------- 267
                 +    G  KM K+    I + + +    + W   R                   
Sbjct: 181 ARDALRVPGVDGAGKMSKSKGNTIAILEPLD---SIWAKLRPAPTDPARVRRTDPGNPDK 237

Query: 268 -DVVSFAKRLTTL-PMSEIDRMAKLQGKEINEAKKII 302
             +  + K  + L  +  I       G    + KK +
Sbjct: 238 CLIGDYHKLFSDLDTLDMIRTGCTTAGIGCVDCKKAL 274


>gi|294791518|ref|ZP_06756675.1| cytotoxin/hemolysin [Scardovia inopinata F0304]
 gi|294457989|gb|EFG26343.1| cytotoxin/hemolysin [Scardovia inopinata F0304]
          Length = 276

 Score = 39.0 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 9/46 (19%), Positives = 21/46 (45%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           M +   +V  G   S   A+R L++  + +N  + +     ++ +D
Sbjct: 1   MRIDKALVSRGLCPSRTRAQRLLEAGLVLLNGHVCTKPSQTVEDKD 46


>gi|261749610|ref|YP_003257296.1| hypothetical protein BPLAN_550 [Blattabacterium sp. (Periplaneta
           americana) str. BPLAN]
 gi|261497703|gb|ACX84153.1| conserved hypothetical protein [Blattabacterium sp. (Periplaneta
           americana) str. BPLAN]
          Length = 255

 Score = 39.0 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 13/60 (21%), Positives = 27/60 (45%), Gaps = 1/60 (1%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           +  AG   S  EA + ++S  I++N  I++     +   D       ++   KK +I+ +
Sbjct: 22  LSNAGIT-SRREADKLIQSGLIEVNGKIVTKFGTVVHKNDVIKFHGSRIKNKKKIYILLN 80


>gi|312139846|ref|YP_004007182.1| pseudouridylate synthase [Rhodococcus equi 103S]
 gi|325674277|ref|ZP_08153966.1| ribosomal large subunit pseudouridine synthase B [Rhodococcus equi
           ATCC 33707]
 gi|311889185|emb|CBH48499.1| pseudouridylate synthase [Rhodococcus equi 103S]
 gi|325554957|gb|EGD24630.1| ribosomal large subunit pseudouridine synthase B [Rhodococcus equi
           ATCC 33707]
          Length = 321

 Score = 39.0 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 8/63 (12%), Positives = 25/63 (39%), Gaps = 4/63 (6%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD---STGNIK 403
             G+ L  ++ +AG   S   A   +    ++++  I+  + L++  ++         + 
Sbjct: 78  GDGVRLQKVLAQAG-VASRRAAEELIDQGRVEVDGRIVLEQGLRVDPENAIVRVDGIRVV 136

Query: 404 LSF 406
           +  
Sbjct: 137 VKK 139


>gi|254424480|ref|ZP_05038198.1| hemolysin A [Synechococcus sp. PCC 7335]
 gi|196191969|gb|EDX86933.1| hemolysin A [Synechococcus sp. PCC 7335]
          Length = 283

 Score = 39.0 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 10/40 (25%), Positives = 19/40 (47%)

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
           L+V+ G   S  +A+R +++  +KI   II      +   
Sbjct: 22  LLVEQGLCPSRQQAQRLIRAGEVKIAQQIIDKPGTLVATD 61


>gi|123968189|ref|YP_001009047.1| tryptophanyl-tRNA synthetase [Prochlorococcus marinus str. AS9601]
 gi|123198299|gb|ABM69940.1| Tryptophanyl-tRNA synthetase [Prochlorococcus marinus str. AS9601]
          Length = 338

 Score = 39.0 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 41/280 (14%), Positives = 89/280 (31%), Gaps = 52/280 (18%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL-MGGGTSIIGDPSFRDESRRMMRSQEI 99
           G   T   LH G+    +   W++        L +    +I    + ++ S+  + +  +
Sbjct: 10  GVQPTGD-LHIGNWLGAIN-NWVELQDQYETFLCVVDLHAITASYNPKELSKNTISTAAL 67

Query: 100 QENIEKIKGIFSSFIK-YGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
                    I S F++   +  ++   + N   +  I +++            RM+ F+ 
Sbjct: 68  YVACGIDPNICSIFVQSQISAHSELCWILNC--MTPINWME------------RMIQFKE 113

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL------ 212
               +++  ++S   F+Y IL A D +     Y+      G DQ  ++    D+      
Sbjct: 114 --KSIQQGNNVSIGLFDYPILMAADILL----YNADFVPVGEDQKQHLELARDIAQQRIN 167

Query: 213 GERLKTPKLFALTSPLLTTA--------SG-TKMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
               K   +  +  P++            G  KM K+          +  P    +  + 
Sbjct: 168 ARFSKDKNILKIPQPIIMKNGSKIMSLIDGSKKMSKSDPNEGSRINLLDPPEIITKKIKR 227

Query: 264 I-DDADVV------------SFAKRLTTLPMSEIDRMAKL 290
              D+ V             +     + L   EI +    
Sbjct: 228 AKSDSSVGIEFNNPERPESKNLLMIYSILSGKEISQCENE 267


>gi|218259522|ref|ZP_03475235.1| hypothetical protein PRABACTJOHN_00893 [Parabacteroides johnsonii
           DSM 18315]
 gi|218225053|gb|EEC97703.1| hypothetical protein PRABACTJOHN_00893 [Parabacteroides johnsonii
           DSM 18315]
          Length = 201

 Score = 39.0 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 24/55 (43%), Gaps = 2/55 (3%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGK 408
            LI  +G   S  EA + ++   + +N S +     ++   D     +I++  GK
Sbjct: 7   KLISDSGLC-SRREADKFIEEGRVTVNGS-LPQVGQKVTEGDIVMLDDIQVKIGK 59


>gi|139474355|ref|YP_001129071.1| ribosomal large subunit pseudouridine synthase B [Streptococcus
           pyogenes str. Manfredo]
 gi|134272602|emb|CAM30869.1| ribosomal large subunit pseudouridine synthase B [Streptococcus
           pyogenes str. Manfredo]
          Length = 240

 Score = 39.0 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 19/40 (47%), Gaps = 1/40 (2%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           I  AG A S  +A   +K   + +N  +I++    +K  D
Sbjct: 7   IAHAGIA-SRRKAEELIKQGLVTLNGQVITDLATTVKSGD 45


>gi|15674518|ref|NP_268692.1| hypothetical protein SPy_0369 [Streptococcus pyogenes M1 GAS]
 gi|13621621|gb|AAK33413.1| putative hypothetical protein [Streptococcus pyogenes M1 GAS]
          Length = 240

 Score = 39.0 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 19/40 (47%), Gaps = 1/40 (2%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           I  AG A S  +A   +K   + +N  +I++    +K  D
Sbjct: 7   IAHAGIA-SRRKAEELIKQGLVTLNGQVITDLATTVKSGD 45


>gi|88860840|ref|ZP_01135476.1| putative ribosomal RNA pseudouridylate synthase [Pseudoalteromonas
           tunicata D2]
 gi|88817053|gb|EAR26872.1| putative ribosomal RNA pseudouridylate synthase [Pseudoalteromonas
           tunicata D2]
          Length = 229

 Score = 39.0 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 9/35 (25%), Positives = 15/35 (42%), Gaps = 1/35 (2%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINN 381
           + G+ L   I  AG   S  +A R +    + +N 
Sbjct: 2   NDGIRLAKYIANAGLC-SRRQASRLIDQGLVTVNG 35


>gi|260061659|ref|YP_003194739.1| ribosomal large subunit pseudouridine synthase B [Robiginitalea
           biformata HTCC2501]
 gi|88785791|gb|EAR16960.1| ribosomal large subunit pseudouridine synthase B [Robiginitalea
           biformata HTCC2501]
          Length = 303

 Score = 39.0 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 11/60 (18%), Positives = 25/60 (41%), Gaps = 1/60 (1%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           I  AG   S  EA  ++ +  + +N   I+    +++  D        L   +K +++ +
Sbjct: 76  IANAGIC-SRREADTYIAAGNVTVNGKTITEMGYKVQPTDEVRFDGRLLQRERKEYVLLN 134


>gi|308174106|ref|YP_003920811.1| pseudouridine synthase [Bacillus amyloliquefaciens DSM 7]
 gi|307606970|emb|CBI43341.1| pseudouridine synthase [Bacillus amyloliquefaciens DSM 7]
 gi|328552765|gb|AEB23257.1| pseudouridine synthase [Bacillus amyloliquefaciens TA208]
 gi|328912437|gb|AEB64033.1| pseudouridine synthase [Bacillus amyloliquefaciens LL3]
          Length = 244

 Score = 39.0 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 24/55 (43%), Gaps = 1/55 (1%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
           L  +I  AG   S  +A   +K   +K+N  +I+   +++   D      +K+  
Sbjct: 4   LQKVIAHAG-VASRRKAEELIKEGKVKVNGKVITELGVKVTGSDQIEVNGLKVER 57


>gi|295694865|ref|YP_003588103.1| ribosomal protein S4 [Bacillus tusciae DSM 2912]
 gi|295410467|gb|ADG04959.1| ribosomal protein S4 [Bacillus tusciae DSM 2912]
          Length = 208

 Score = 39.0 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 10/48 (20%), Positives = 21/48 (43%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
            ++ + G+A S  EAR+ ++     +N   +     Q+K  D  +   
Sbjct: 102 NVVYRLGYAASRAEARQLVRHGHFTVNGRRVDIPSYQLKEGDVVAVRE 149


>gi|288921308|ref|ZP_06415590.1| tryptophanyl-tRNA synthetase [Frankia sp. EUN1f]
 gi|288347282|gb|EFC81577.1| tryptophanyl-tRNA synthetase [Frankia sp. EUN1f]
          Length = 333

 Score = 39.0 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 19/95 (20%), Positives = 32/95 (33%), Gaps = 17/95 (17%)

Query: 166 EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT--PKLFA 223
           +  ++   FNY IL A D + +       +   G DQ  ++    D+           ++
Sbjct: 122 DAGVNMGLFNYPILMAVDILIM----GSDVVPVGQDQVQHVEYAADIAGSFNHLFGSEYS 177

Query: 224 LTSPL-----------LTTASGTKMGKTLSGAIWL 247
           L  P            +    G KM K+    I L
Sbjct: 178 LKIPTALIPAGTGARTMPGTDGRKMSKSYGNTIPL 212


>gi|260463253|ref|ZP_05811454.1| RNA-binding S4 domain protein [Mesorhizobium opportunistum WSM2075]
 gi|259030843|gb|EEW32118.1| RNA-binding S4 domain protein [Mesorhizobium opportunistum WSM2075]
          Length = 607

 Score = 39.0 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 8/47 (17%), Positives = 21/47 (44%), Gaps = 1/47 (2%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
           +   + +AG A S  +A   + +  +K+N  ++++    +   D   
Sbjct: 163 IAKRLARAGLA-SRRDAEDLIAAGRVKVNGRVLASPAFNVMPGDIIH 208


>gi|255011672|ref|ZP_05283798.1| 30S ribosomal protein S4 [Bacteroides fragilis 3_1_12]
 gi|313149508|ref|ZP_07811701.1| 30S ribosomal protein S4 [Bacteroides fragilis 3_1_12]
 gi|313138275|gb|EFR55635.1| 30S ribosomal protein S4 [Bacteroides fragilis 3_1_12]
          Length = 201

 Score = 39.0 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 9/82 (10%), Positives = 28/82 (34%), Gaps = 3/82 (3%)

Query: 320 ATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKI 379
                  F+ +  ++ + T  +    +   +    L+ + G A +   AR+ +    I +
Sbjct: 65  EKQFRNLFEKAATAKGI-TGEVLLQMLEGRLD--NLVFRLGIAPTRAAARQLVSHRHITV 121

Query: 380 NNSIISNEKLQIKLQDFDSTGN 401
           +  +++     +K         
Sbjct: 122 DGQVVNIPSYAVKPGQLIGVRE 143


>gi|297559358|ref|YP_003678332.1| tryptophanyl-tRNA synthetase [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
 gi|296843806|gb|ADH65826.1| tryptophanyl-tRNA synthetase [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
          Length = 335

 Score = 39.0 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 32/225 (14%), Positives = 71/225 (31%), Gaps = 36/225 (16%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   T    H G+    +       T +     +    +             +   ++  
Sbjct: 9   GIKPTGDF-HLGNYIGAIKPALSAATAYDTYYFIADYHA-------------LNTIKDAD 54

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           E    I+   ++++  G      ++        + +   +L  +     +NR  ++++ R
Sbjct: 55  ELRHSIRSGAATWLACGLDPERTIVYQQSRVPETFELTTILSALTPKGLMNRAHAYKAAR 114

Query: 161 SRLKR------EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
            R         +  ++   +NY IL A D + +       + +G  DQ  +I    D+  
Sbjct: 115 DRNNEAGITDLDAGINMGLYNYPILMAADILVM---EGTHVPVG-RDQSQHIEYTADIAG 170

Query: 215 RLKT--PKLFALTSP----------LLTTASGTKMGKTLSGAIWL 247
                  + ++   P          +L    G KM K+    I L
Sbjct: 171 YFNHRFGESYSFPVPKGVIDDSDASILPGVDGRKMSKSYDNHIPL 215


>gi|154686561|ref|YP_001421722.1| RluB [Bacillus amyloliquefaciens FZB42]
 gi|154352412|gb|ABS74491.1| RluB [Bacillus amyloliquefaciens FZB42]
          Length = 244

 Score = 39.0 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 24/55 (43%), Gaps = 1/55 (1%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
           L  +I  AG   S  +A   +K   +K+N  +I+   +++   D      +K+  
Sbjct: 4   LQKVIAHAG-VASRRKAEELIKEGKVKVNGKVITELGVKVTGSDQIEVNGLKVER 57


>gi|307297760|ref|ZP_07577566.1| RNA-binding S4 domain protein [Thermotogales bacterium
           mesG1.Ag.4.2]
 gi|306917020|gb|EFN47402.1| RNA-binding S4 domain protein [Thermotogales bacterium
           mesG1.Ag.4.2]
          Length = 231

 Score = 39.0 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 9/32 (28%), Positives = 18/32 (56%)

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           S +E+RR ++SN + +N  + +N    +   D
Sbjct: 14  SRSESRRIIRSNGVSLNGVLTNNPSEVVDETD 45


>gi|254448065|ref|ZP_05061529.1| tryptophanyl-tRNA synthetase [gamma proteobacterium HTCC5015]
 gi|198262491|gb|EDY86772.1| tryptophanyl-tRNA synthetase [gamma proteobacterium HTCC5015]
          Length = 355

 Score = 39.0 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 20/83 (24%), Positives = 31/83 (37%), Gaps = 13/83 (15%)

Query: 174 FNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT---------PKLFAL 224
           FNY +L A D +    +   R+ +G  DQ  ++    D+ +R                  
Sbjct: 155 FNYPVLMAADMLLFDAD---RVPVG-RDQIQHLEMARDMAQRFNHLYGEHFALPEAQVDE 210

Query: 225 TSPLLTTASGTKMGKTLSGAIWL 247
            S +L    G KM K+    I L
Sbjct: 211 DSAVLQGLDGRKMSKSYDNTIPL 233


>gi|126667221|ref|ZP_01738195.1| 23S rRNA pseudouridine synthase [Marinobacter sp. ELB17]
 gi|126628377|gb|EAZ99000.1| 23S rRNA pseudouridine synthase [Marinobacter sp. ELB17]
          Length = 317

 Score = 39.0 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 11/48 (22%), Positives = 19/48 (39%), Gaps = 1/48 (2%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
           I ++G   S  EA R+++   ++IN    S     +        G I 
Sbjct: 13  ISESGIC-SRREADRYIEQGNVRINGKRASVGDQVLPTDTVMVNGQII 59


>gi|134296278|ref|YP_001120013.1| tryptophanyl-tRNA synthetase [Burkholderia vietnamiensis G4]
 gi|134139435|gb|ABO55178.1| tryptophanyl-tRNA synthetase [Burkholderia vietnamiensis G4]
          Length = 400

 Score = 39.0 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 38/231 (16%), Positives = 77/231 (33%), Gaps = 42/231 (18%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGD----PSFRDESRRMMRS 96
           G D T ++L                  H  ++L+ G ++ +G     P+++++  ++   
Sbjct: 72  GIDPTQATLFIQSKVP----------EHAELALLLGMSTPLGWLERVPTYKEQMEKLKDK 121

Query: 97  QEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSF 156
                       + ++ I    G    +  +       + ++++ REI   F  N +   
Sbjct: 122 DLSTYGFLGYPVLMAADILLYRGSLVPVGED------QVPHVEMTREIARRF--NYLYGR 173

Query: 157 ES--------VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIIC 208
           E            +L  +++  + E      Q  D   L +     LQ     Q  ++  
Sbjct: 174 EPGFEEKALEAAKKLGGKRAKLYHELRNAYQQEGDDEALEQAR-AMLQES---QSLSMSD 229

Query: 209 GIDLGERLKTPKLFALTSP--LLT------TASGTKMGKTLSGAIWLNKEM 251
              L   L+  +   L  P  LLT         G KM K+    I L ++ 
Sbjct: 230 RERLFGYLEGARKIILVEPQALLTEASRMPGLDGQKMSKSYGNTIGLREDA 280


>gi|269102853|ref|ZP_06155550.1| tryptophanyl-tRNA synthetase [Photobacterium damselae subsp.
           damselae CIP 102761]
 gi|268162751|gb|EEZ41247.1| tryptophanyl-tRNA synthetase [Photobacterium damselae subsp.
           damselae CIP 102761]
          Length = 359

 Score = 39.0 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 35/215 (16%), Positives = 63/215 (29%), Gaps = 34/215 (15%)

Query: 49  LHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKG 108
           LH GH    +      +  ++   L+     +       D            +    I  
Sbjct: 42  LHLGHFVGSLQQRVALQHQYQQTILIADMQGL------TDNGHNP------HKVASNILN 89

Query: 109 IFSSFIK--YGTGKTDALMLNNETWLCSIKYIDLLREI--GSFFSVNRMLSFESVRSRLK 164
           + + ++       KT   + +    L  +        +   S    N  +  E    +  
Sbjct: 90  VMADYLAVGIDPTKTTICLQSALPALAELTM--FYSNVVSVSRLQRNPTVKAEIQSKQFG 147

Query: 165 REQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT---PKL 221
           +     FL   Y I QA D       +   L   G DQ   I    ++  ++ T     +
Sbjct: 148 QSIPTGFL--TYPISQAADITA----FKATLIPVGDDQLPMIEQTNEIVRKINTIADKDI 201

Query: 222 FALTSPL------LTTASGT-KMGKTLSGAIWLNK 249
                PL      L +  G  KM K++   I+L  
Sbjct: 202 LVECQPLLSHVARLPSPDGKNKMSKSMGNCIFLGA 236


>gi|257469264|ref|ZP_05633358.1| ribosomal large subunit pseudouridine synthase B [Fusobacterium
           ulcerans ATCC 49185]
 gi|317063511|ref|ZP_07927996.1| ribosomal large subunit pseudouridine synthase B [Fusobacterium
           ulcerans ATCC 49185]
 gi|313689187|gb|EFS26022.1| ribosomal large subunit pseudouridine synthase B [Fusobacterium
           ulcerans ATCC 49185]
          Length = 236

 Score = 39.0 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 13/62 (20%), Positives = 24/62 (38%), Gaps = 8/62 (12%)

Query: 348 RGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFG 407
             M +   +   G A S  E  + ++  AIK+N    +   +++  +D           G
Sbjct: 2   EEMRINKYLASLGIA-SRREVDKMIEEGAIKVNGEK-AAPGIKVSDEDEIYI------KG 53

Query: 408 KK 409
           KK
Sbjct: 54  KK 55


>gi|332883058|gb|EGK03342.1| hypothetical protein HMPREF9456_01979 [Dysgonomonas mossii DSM
           22836]
          Length = 482

 Score = 39.0 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 15/85 (17%), Positives = 29/85 (34%), Gaps = 9/85 (10%)

Query: 312 GREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRH 371
           G     KAA           + +++        + S  + L   +  AG   S  EA   
Sbjct: 217 GGGGYNKAAEGVKRLVKPVKYKENI--------DPSTPLRLNKYLANAGVC-SRREADAF 267

Query: 372 LKSNAIKINNSIISNEKLQIKLQDF 396
           + S  +K+N  ++     ++   D 
Sbjct: 268 ITSGVVKVNGEVVDQLGAKVTRGDL 292


>gi|223936404|ref|ZP_03628316.1| ribosomal protein S4 [bacterium Ellin514]
 gi|223894922|gb|EEF61371.1| ribosomal protein S4 [bacterium Ellin514]
          Length = 202

 Score = 39.0 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 9/53 (16%), Positives = 23/53 (43%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            ++   GFA +   AR+ +    +++N   ++     +K+ D     +  +S 
Sbjct: 96  NVVFHLGFANTRAAARQLVSHGHVRVNGRKVNIPSFALKVNDVIEAKDSNVSR 148


>gi|21909805|ref|NP_664073.1| putative ribosomal large subunit pseudouridine synthase
           [Streptococcus pyogenes MGAS315]
 gi|28896502|ref|NP_802852.1| hypothetical protein SPs1590 [Streptococcus pyogenes SSI-1]
 gi|21903991|gb|AAM78876.1| putative ribosomal large subunit pseudouridine synthase
           [Streptococcus pyogenes MGAS315]
 gi|28811756|dbj|BAC64685.1| putative hypothetical protein [Streptococcus pyogenes SSI-1]
          Length = 240

 Score = 39.0 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 19/40 (47%), Gaps = 1/40 (2%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           I  AG A S  +A   +K   + +N  +I++    +K  D
Sbjct: 7   IAHAGIA-SRRKAEELIKQGLVTLNGQVITDLATTVKSGD 45


>gi|304393803|ref|ZP_07375728.1| tryptophan--tRNA ligase [Ahrensia sp. R2A130]
 gi|303294002|gb|EFL88377.1| tryptophan--tRNA ligase [Ahrensia sp. R2A130]
          Length = 356

 Score = 39.0 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 46/273 (16%), Positives = 81/273 (29%), Gaps = 64/273 (23%)

Query: 35  VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSII--GDPSFRDESRR 92
               + G   T + LH G+    +  F   +  H  I  +    +I    DP+   ++ R
Sbjct: 5   PERVFSGVQPTGN-LHLGNYLGAIKKFVALQESHDCIYCVVDLHAITVWQDPAELQQNIR 63

Query: 93  MMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN---NETWLCSIKYIDLLREIGSFFS 149
            + +  I   I+  K I  +  +       A + N      WL  +       + G    
Sbjct: 64  EVTAAFIASGIDPTKHIVFNQSQVSEHAELAWVFNCVARMGWLSRMT--QFKEKAG---- 117

Query: 150 VNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICG 209
                     + R K    L    F+Y  L A D +   +     +   G DQ  ++   
Sbjct: 118 ----------KDREKASVGL----FSYPTLMASDIL-TYRATHVPV---GEDQKQHLELT 159

Query: 210 IDL-------------GERLKTPKLFA---------LTSPLLTTA--------SGT-KMG 238
            D+                L  P             LT P++            GT KM 
Sbjct: 160 RDIAQKFNNDYSDRIAQLDLGVPMQVGDEHVNGYFPLTEPIIGGPAARVMSLRDGTKKMS 219

Query: 239 KTLSGA---IWLNKEMTSPYNFWQYWRNIDDAD 268
           K+       I +  +  +    ++  +   DA 
Sbjct: 220 KSDPSDLSRIVMTDDADTIAKKFKKAKTDPDAL 252


>gi|217969055|ref|YP_002354289.1| tryptophanyl-tRNA synthetase [Thauera sp. MZ1T]
 gi|217506382|gb|ACK53393.1| tryptophanyl-tRNA synthetase [Thauera sp. MZ1T]
          Length = 435

 Score = 39.0 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 17/91 (18%), Positives = 31/91 (34%), Gaps = 13/91 (14%)

Query: 166 EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL---------GERL 216
           +  ++   + Y +L A D + + K +   +   G DQ  +I    D+            +
Sbjct: 127 DAGVNMGLYMYPVLMAADIL-MFKAHSVPV---GRDQIQHIEMARDMAGSFNHLYGEHFV 182

Query: 217 KTPKLFALTSPLLTTASGTKMGKTLSGAIWL 247
                   +   L    G KM K+    I L
Sbjct: 183 LPEAAIDASVATLPGLDGRKMSKSYDNTIPL 213


>gi|15599635|ref|NP_253129.1| tryptophanyl-tRNA synthetase [Pseudomonas aeruginosa PAO1]
 gi|218893530|ref|YP_002442399.1| tryptophanyl-tRNA synthetase [Pseudomonas aeruginosa LESB58]
 gi|254244748|ref|ZP_04938070.1| tryptophanyl-tRNA synthetase [Pseudomonas aeruginosa 2192]
 gi|25009446|sp|Q9HVX6|SYW_PSEAE RecName: Full=Tryptophanyl-tRNA synthetase; AltName:
           Full=Tryptophan--tRNA ligase; Short=TrpRS
 gi|9950673|gb|AAG07827.1|AE004858_5 tryptophanyl-tRNA synthetase [Pseudomonas aeruginosa PAO1]
 gi|126198126|gb|EAZ62189.1| tryptophanyl-tRNA synthetase [Pseudomonas aeruginosa 2192]
 gi|218773758|emb|CAW29572.1| tryptophanyl-tRNA synthetase [Pseudomonas aeruginosa LESB58]
          Length = 448

 Score = 39.0 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 33/221 (14%), Positives = 65/221 (29%), Gaps = 38/221 (17%)

Query: 166 EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-----TPK 220
           +  ++   ++Y +L A D +    +   ++ +G  DQ  ++    D+G+R         +
Sbjct: 126 DAGVTMGLYSYPVLMAADILMFNAH---KIPVG-RDQVQHVEMARDIGQRFNHLFGNGRE 181

Query: 221 LFAL-------TSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNID-------D 266
            F L           L    G KM K+    I L        +                D
Sbjct: 182 FFVLPEAVIEENVATLPGLDGRKMSKSYDNTIPLFSPSRQLKDAIARIVTDSRAPGEPKD 241

Query: 267 ADVVSFAKRLT-TLPMSEID--RMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAA 323
            D        +      ++   R   L+G    EAK+ +   +        E  +A    
Sbjct: 242 PDSSHLFLLYSAFASAEQVAAFRQELLEGLAWGEAKQRLFQLL------DNELGEARERY 295

Query: 324 MECFDMSIHSQHMPTISISKDEVSRGMG---LLTLIVKAGF 361
                       +  I ++    +R +    +  L    G 
Sbjct: 296 QALIAK---PDDIEDILLAGAAKARRIATPFIAELREAVGL 333


>gi|318042231|ref|ZP_07974187.1| hypothetical protein SCB01_11007 [Synechococcus sp. CB0101]
          Length = 263

 Score = 39.0 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 9/55 (16%), Positives = 26/55 (47%), Gaps = 3/55 (5%)

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD---FDSTGNIKL 404
           L  +  AG   S +     ++  ++++N  +I++   +++  D    D  G +++
Sbjct: 191 LDAVASAGLGLSRSRMADLIRQGSVRVNWQVITSPSKELRCGDRVRLDGRGELEI 245


>gi|321248591|ref|XP_003191176.1| nam9 protein, mitochondrial precursor [Cryptococcus gattii WM276]
 gi|317457643|gb|ADV19389.1| nam9 protein, mitochondrial precursor, putative [Cryptococcus
           gattii WM276]
          Length = 317

 Score = 39.0 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 9/29 (31%), Positives = 16/29 (55%)

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQD 395
           EARR++    +K+N  +I N  + +   D
Sbjct: 159 EARRYVVQGHVKLNGQVIRNPNIMLNPGD 187


>gi|314982287|gb|EFT26380.1| ribosomal protein S4 [Propionibacterium acnes HL110PA3]
          Length = 201

 Score = 39.0 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 7/48 (14%), Positives = 19/48 (39%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
            ++ +AG A +  +AR+ +      +N   ++    ++   D      
Sbjct: 95  NVVYRAGLAATRRQARQKVSHGHFLVNGKKVNIPSYRVSTHDIIDVRE 142


>gi|118443863|ref|YP_877455.1| leucyl-tRNA synthetase [Clostridium novyi NT]
 gi|166231600|sp|A0PYK3|SYL_CLONN RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|118134319|gb|ABK61363.1| leucyl-tRNA synthetase [Clostridium novyi NT]
          Length = 812

 Score = 39.0 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 14/79 (17%), Positives = 27/79 (34%), Gaps = 12/79 (15%)

Query: 210 IDLGERLKTPKLFALTSP-LLTTASGTKMGKTLSGAIWLNK-------EMTSPYNFWQYW 261
            D+G         +LT   L+    G KM K+    I  +        ++   Y  + + 
Sbjct: 545 RDMGYLNFDEPFTSLTHQGLILGPDGLKMSKSKGNTIAPDDYIKEYGADVFRMYLMFGFA 604

Query: 262 RN----IDDADVVSFAKRL 276
            +      D  + S +K +
Sbjct: 605 YSEGGAWSDDAIKSMSKFV 623


>gi|77164551|ref|YP_343076.1| tryptophanyl-tRNA synthetase [Nitrosococcus oceani ATCC 19707]
 gi|254433961|ref|ZP_05047469.1| tryptophanyl-tRNA synthetase [Nitrosococcus oceani AFC27]
 gi|76882865|gb|ABA57546.1| tryptophanyl-tRNA synthetase [Nitrosococcus oceani ATCC 19707]
 gi|207090294|gb|EDZ67565.1| tryptophanyl-tRNA synthetase [Nitrosococcus oceani AFC27]
          Length = 405

 Score = 39.0 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 39/235 (16%), Positives = 69/235 (29%), Gaps = 72/235 (30%)

Query: 141 LREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGS 200
           ++++G     N  L  E  R R + +  +  L+      +A  F+E  +N    L +G  
Sbjct: 190 IKKMGKK---NAQLYREL-RRRFQEQGDVEALD------KARAFLETQQN----LTLGDR 235

Query: 201 DQWGNIICGIDLGERLKTPKLFALTSPL-LTTASGTKMGKTLSGAIWLNKEMTSPYNFWQ 259
           ++    + G   G+ +       LT    +    G KM K+    I L +    P    +
Sbjct: 236 ERLFGHLEGE--GKVILPEPQALLTPAARMPGLDGQKMSKSYGNTIALREP---PEQVER 290

Query: 260 YWRNID------------DAD---VVSFAKRLTTLPMSE--------------------- 283
             R +             D +   V  F +  +   + E                     
Sbjct: 291 KLRTMPTDPARVRRTDPGDPEKCPVWQFHRVYSDDEVKEWVQKGCRTAGIGCLDCKQPII 350

Query: 284 ---------IDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDM 329
                    I   A+       E ++II         G E A + A   M     
Sbjct: 351 DAIQSELKPIRERAQEYAHHPEEIQRIIKE-------GNEAAREVARETMAEVRQ 398


>gi|256832356|ref|YP_003161083.1| hemolysin A [Jonesia denitrificans DSM 20603]
 gi|256685887|gb|ACV08780.1| hemolysin A [Jonesia denitrificans DSM 20603]
          Length = 310

 Score = 39.0 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 10/36 (27%), Positives = 15/36 (41%)

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           G A S N A R +   A+ +N   I+     +   D
Sbjct: 18  GLAPSRNRAARIISDGAVFVNGRSITKPAWPVHNAD 53


>gi|50365008|ref|YP_053433.1| tryptophanyl-tRNA synthetase [Mesoplasma florum L1]
 gi|50363564|gb|AAT75549.1| tryptophanyl-tRNA synthetase [Mesoplasma florum L1]
          Length = 350

 Score = 39.0 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 28/151 (18%), Positives = 52/151 (34%), Gaps = 29/151 (19%)

Query: 174 FNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTT 231
           F Y  L A D +     YD +    G DQ  ++    D+  R+     ++  +  P+LT 
Sbjct: 144 FTYPCLMAADILL----YDPKFVPVGVDQKQHLELARDIATRMNNKYGEMHVVPEPILTK 199

Query: 232 AS---------GTKMGKTLSGAIWLNKEMTSPYNFWQYWRN-IDDAD------------V 269
            +           KM K+      + K + SP       ++ + D++            V
Sbjct: 200 GNIKIMDLQDPTKKMSKSSENPKAVIKMLDSPAEIANKIKSAVTDSENLIKYDPINKPGV 259

Query: 270 VSFAKRLTTLPMSEIDRM-AKLQGKEINEAK 299
            +     + +    I+    K  GK   + K
Sbjct: 260 SNLMNIYSIIKNVSIEECQKKWDGKNYKDLK 290


>gi|319442996|ref|ZP_07992152.1| 30S ribosomal protein S4 [Corynebacterium variabile DSM 44702]
          Length = 201

 Score = 39.0 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 19/45 (42%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
            ++ +AG A +  +AR+ +      +N   I+    Q+   D   
Sbjct: 95  NVVYRAGLARTRRQARQLVSHGHFTVNGKKINVPSFQVSQYDIID 139


>gi|319788115|ref|YP_004147590.1| tryptophanyl-tRNA synthetase [Pseudoxanthomonas suwonensis 11-1]
 gi|317466627|gb|ADV28359.1| tryptophanyl-tRNA synthetase [Pseudoxanthomonas suwonensis 11-1]
          Length = 455

 Score = 39.0 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 46/301 (15%), Positives = 86/301 (28%), Gaps = 60/301 (19%)

Query: 50  HAGHLT-QLMLLFWLQKT-GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIK 107
           H G+    +       +  G +    +    ++I     R  +R  +  +     +    
Sbjct: 16  HLGNYAGAIRPAVAASRAPGVESFFFLADYHALIKADDPRRVARSRL--EIAATWLACGL 73

Query: 108 GIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLS-FESVRSRLKRE 166
                     +   +   L   TWL        L  + +   +NR  +   +V    +  
Sbjct: 74  DPEKVVFYRQSDIPEIPQL---TWL--------LTCVTAKGLLNRAHAYKAAVDKNTEAG 122

Query: 167 Q----SLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT---- 218
           +     ++   + Y +L A D +     +       G DQ  +I    D+G+R       
Sbjct: 123 EDADAGVTAGLYMYPVLMAADILA----FGAHKVPVGRDQIQHIEMARDIGQRFNHLYGD 178

Query: 219 --PKLFA-----LTSP---------LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWR 262
              +        L  P          L    G KM K+    I        P    +   
Sbjct: 179 AWRQATGQSGEPLVLPEVQIDENVATLPGLDGRKMSKSYDNTI---PLFAPPAEIKRLVM 235

Query: 263 NI----------DDAD---VVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTM 309
           +I           D +   V    +   T   +E  R A  +G    +AK+ +   I   
Sbjct: 236 SIVTDSRAPGEPKDTEGSAVFQLYQAFATPEQAEEMRHAFAEGIGWGDAKQRLVARIEDA 295

Query: 310 V 310
           V
Sbjct: 296 V 296


>gi|255325778|ref|ZP_05366872.1| S4 domain protein [Corynebacterium tuberculostearicum SK141]
 gi|311741152|ref|ZP_07714977.1| RNA-binding S4 [Corynebacterium pseudogenitalium ATCC 33035]
 gi|255297189|gb|EET76512.1| S4 domain protein [Corynebacterium tuberculostearicum SK141]
 gi|311303954|gb|EFQ80032.1| RNA-binding S4 [Corynebacterium pseudogenitalium ATCC 33035]
          Length = 94

 Score = 39.0 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 8/61 (13%), Positives = 17/61 (27%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
              + L   I  A    +  EA+  +    + +N    +     +   D     +     
Sbjct: 8   GDSIKLGQFIKLASLVATGGEAKELIAEGVVTVNGEPETRRGAMLHPGDEVCIEDACARV 67

Query: 407 G 407
           G
Sbjct: 68  G 68


>gi|295658597|ref|XP_002789859.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb01]
 gi|226283003|gb|EEH38569.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb01]
          Length = 453

 Score = 39.0 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 19/128 (14%), Positives = 42/128 (32%), Gaps = 32/128 (25%)

Query: 299 KKIIATEITTMVHGRE------------------------------EAEKAATAAMECFD 328
           +K +A  +    HG +                               AE A   +     
Sbjct: 88  QKWLAKSLARTYHGEQVRESQWEKMFCRRLRSVVPMDVNYLARNDGSAESAGRGSGVQEA 147

Query: 329 MSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEK 388
               +   P + ++   + R + +   I +A FA+ST +AR+ +   ++ +N   + +  
Sbjct: 148 GPRKAPLTPYMQMAFAPLERRLDVA--IFRAMFASSTRQARQFVLHGSVTVNGKKMKHPG 205

Query: 389 LQIKLQDF 396
             +   D 
Sbjct: 206 YLLNPGDL 213


>gi|255690029|ref|ZP_05413704.1| ribosomal protein S4 [Bacteroides finegoldii DSM 17565]
 gi|260624636|gb|EEX47507.1| ribosomal protein S4 [Bacteroides finegoldii DSM 17565]
          Length = 201

 Score = 39.0 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 8/82 (9%), Positives = 28/82 (34%), Gaps = 3/82 (3%)

Query: 320 ATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKI 379
                  F+ +  ++ + T  +    +   +    ++ + G A +   AR+ +    I +
Sbjct: 65  EKQFRNLFEKAATAKGI-TGEVLLQLLEGRLD--NVVFRLGIAPTRAAARQLVSHKHITV 121

Query: 380 NNSIISNEKLQIKLQDFDSTGN 401
           +  +++     +K         
Sbjct: 122 DGEVVNIPSYAVKPGQLIGVRE 143


>gi|313763970|gb|EFS35334.1| S4 domain protein [Propionibacterium acnes HL013PA1]
 gi|313791626|gb|EFS39744.1| S4 domain protein [Propionibacterium acnes HL110PA1]
 gi|313802289|gb|EFS43515.1| S4 domain protein [Propionibacterium acnes HL110PA2]
 gi|313808159|gb|EFS46633.1| S4 domain protein [Propionibacterium acnes HL087PA2]
 gi|313812557|gb|EFS50271.1| S4 domain protein [Propionibacterium acnes HL025PA1]
 gi|313814903|gb|EFS52617.1| S4 domain protein [Propionibacterium acnes HL059PA1]
 gi|313818926|gb|EFS56640.1| S4 domain protein [Propionibacterium acnes HL046PA2]
 gi|313820755|gb|EFS58469.1| S4 domain protein [Propionibacterium acnes HL036PA1]
 gi|313822480|gb|EFS60194.1| S4 domain protein [Propionibacterium acnes HL036PA2]
 gi|313825724|gb|EFS63438.1| S4 domain protein [Propionibacterium acnes HL063PA1]
 gi|313828068|gb|EFS65782.1| S4 domain protein [Propionibacterium acnes HL063PA2]
 gi|313839055|gb|EFS76769.1| S4 domain protein [Propionibacterium acnes HL086PA1]
 gi|314915000|gb|EFS78831.1| S4 domain protein [Propionibacterium acnes HL005PA4]
 gi|314918670|gb|EFS82501.1| S4 domain protein [Propionibacterium acnes HL050PA1]
 gi|314920475|gb|EFS84306.1| S4 domain protein [Propionibacterium acnes HL050PA3]
 gi|314925670|gb|EFS89501.1| S4 domain protein [Propionibacterium acnes HL036PA3]
 gi|314932149|gb|EFS95980.1| S4 domain protein [Propionibacterium acnes HL067PA1]
 gi|314954585|gb|EFS98991.1| S4 domain protein [Propionibacterium acnes HL027PA1]
 gi|314958616|gb|EFT02718.1| S4 domain protein [Propionibacterium acnes HL002PA1]
 gi|314959777|gb|EFT03879.1| S4 domain protein [Propionibacterium acnes HL002PA2]
 gi|314962352|gb|EFT06453.1| S4 domain protein [Propionibacterium acnes HL082PA1]
 gi|314968218|gb|EFT12317.1| S4 domain protein [Propionibacterium acnes HL037PA1]
 gi|314979161|gb|EFT23255.1| S4 domain protein [Propionibacterium acnes HL072PA2]
 gi|314986715|gb|EFT30807.1| S4 domain protein [Propionibacterium acnes HL005PA2]
 gi|314989458|gb|EFT33549.1| S4 domain protein [Propionibacterium acnes HL005PA3]
 gi|315077438|gb|EFT49498.1| S4 domain protein [Propionibacterium acnes HL053PA2]
 gi|315080182|gb|EFT52158.1| S4 domain protein [Propionibacterium acnes HL078PA1]
 gi|315084063|gb|EFT56039.1| S4 domain protein [Propionibacterium acnes HL027PA2]
 gi|315089118|gb|EFT61094.1| S4 domain protein [Propionibacterium acnes HL072PA1]
 gi|315098941|gb|EFT70917.1| S4 domain protein [Propionibacterium acnes HL059PA2]
 gi|315100818|gb|EFT72794.1| S4 domain protein [Propionibacterium acnes HL046PA1]
 gi|315108036|gb|EFT80012.1| S4 domain protein [Propionibacterium acnes HL030PA2]
 gi|327330519|gb|EGE72266.1| S4 domain protein [Propionibacterium acnes HL096PA3]
 gi|327446856|gb|EGE93510.1| S4 domain protein [Propionibacterium acnes HL013PA2]
 gi|327450119|gb|EGE96773.1| S4 domain protein [Propionibacterium acnes HL087PA3]
 gi|327455154|gb|EGF01809.1| S4 domain protein [Propionibacterium acnes HL092PA1]
 gi|327455327|gb|EGF01982.1| S4 domain protein [Propionibacterium acnes HL083PA2]
 gi|328752532|gb|EGF66148.1| S4 domain protein [Propionibacterium acnes HL020PA1]
 gi|328752784|gb|EGF66400.1| S4 domain protein [Propionibacterium acnes HL087PA1]
 gi|328759294|gb|EGF72910.1| S4 domain protein [Propionibacterium acnes HL025PA2]
          Length = 71

 Score = 39.0 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 9/46 (19%), Positives = 19/46 (41%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           + L   +  A  A +  +AR  + S  + +N  + +    Q+   D
Sbjct: 2   IRLGQYLKFANLAETGGQARELIASGMVSVNGEVETRRGRQLHPGD 47


>gi|302841952|ref|XP_002952520.1| hypothetical protein VOLCADRAFT_93239 [Volvox carteri f.
           nagariensis]
 gi|300262159|gb|EFJ46367.1| hypothetical protein VOLCADRAFT_93239 [Volvox carteri f.
           nagariensis]
          Length = 381

 Score = 39.0 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 9/74 (12%), Positives = 23/74 (31%), Gaps = 1/74 (1%)

Query: 320 ATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKI 379
             +   C +++      P+ S           L  ++   G   S       +    +++
Sbjct: 46  QQSRRSCVEVAAAKGDRPSTSGRSATNESRPRLAKVLAACG-VASRRACEELISEGRVRV 104

Query: 380 NNSIISNEKLQIKL 393
           N  ++S +   I  
Sbjct: 105 NGRVVSEQGTTIDP 118


>gi|149921531|ref|ZP_01909982.1| tryptophanyl-tRNA synthetase [Plesiocystis pacifica SIR-1]
 gi|149817606|gb|EDM77074.1| tryptophanyl-tRNA synthetase [Plesiocystis pacifica SIR-1]
          Length = 348

 Score = 39.0 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 28/186 (15%), Positives = 52/186 (27%), Gaps = 38/186 (20%)

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
            + +     + S   F Y  L A D +     Y+  L   G DQ  +I    D+     T
Sbjct: 121 FKDKAAAGINRSVGLFLYPALMASDILI----YNSTLVPVGKDQIQHIEMAQDMATHFNT 176

Query: 219 -----------------PKLFALT-SPLLTTASGTKMGKTLSGAI-WLNKEMTSPYNFWQ 259
                               + L+ +P +    G KM K+    I              Q
Sbjct: 177 TFCQPKKKGEVVEPVLVRPDYRLSKTPYVPGTDGRKMSKSYGNTIPLFASGKQLKKAVGQ 236

Query: 260 YW---------RNIDDADVVSFAKRLTTL-PMSEIDRMAKLQGKE-----INEAKKIIAT 304
                         +  +V +  +       + +I        ++        AK+++A 
Sbjct: 237 VVTDSTPLGEPLQAEGNNVYAILELFCDEAELEQIRGWYAAGARDGEAFGYGHAKQLLAH 296

Query: 305 EITTMV 310
           +I    
Sbjct: 297 KIDAHF 302


>gi|325981829|ref|YP_004294231.1| 30S ribosomal protein S4 [Nitrosomonas sp. AL212]
 gi|325531348|gb|ADZ26069.1| ribosomal protein S4 [Nitrosomonas sp. AL212]
          Length = 208

 Score = 39.0 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 13/36 (36%), Positives = 21/36 (58%)

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           GF  S +EAR+ ++ N I IN S ++    ++K  D
Sbjct: 108 GFGASRSEARQIVRHNGILINGSRVNIPSYRVKAGD 143


>gi|315045031|ref|XP_003171891.1| 37S ribosomal protein NAM9 [Arthroderma gypseum CBS 118893]
 gi|311344234|gb|EFR03437.1| 37S ribosomal protein NAM9 [Arthroderma gypseum CBS 118893]
          Length = 475

 Score = 39.0 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 15/85 (17%), Positives = 35/85 (41%), Gaps = 6/85 (7%)

Query: 314 EEAEKAATAAMECFDMSIHSQHMPTIS---ISKDEVSRGMGLLTLIVKAGFATSTNEARR 370
           + A +AA       +    ++ +P      ++   + R + +   I +A FA+ST +AR+
Sbjct: 86  DGAAQAAGRGSGLVERG-KTRQVPETPYMLMTFAPLERRLDVA--IFRAMFASSTRQARQ 142

Query: 371 HLKSNAIKINNSIISNEKLQIKLQD 395
            +    + +N   +      +   D
Sbjct: 143 FVIHGGVTVNGKKMQYPGYLLNPGD 167


>gi|299139450|ref|ZP_07032625.1| leucyl-tRNA synthetase [Acidobacterium sp. MP5ACTX8]
 gi|298598719|gb|EFI54882.1| leucyl-tRNA synthetase [Acidobacterium sp. MP5ACTX8]
          Length = 855

 Score = 39.0 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 23/118 (19%), Positives = 39/118 (33%), Gaps = 12/118 (10%)

Query: 210 IDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYN-----FWQYWRNI 264
            DLG          L +  +    G KM K+    +  ++ M S Y       +  +   
Sbjct: 575 RDLGLIKNAEPAERLFTQGMVIKDGAKMSKSKGNVVSPDE-MISRYGADATRMYALFAAP 633

Query: 265 DDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATA 322
            D D+    + +  +    + R+ +L  K           E+    HG E A  A  A
Sbjct: 634 PDRDLEWQEEGVAGISRF-LARVYRLTSKFAPVV-----RELEKNAHGDEIAPSALAA 685


>gi|114319643|ref|YP_741326.1| SSU ribosomal protein S4P [Alkalilimnicola ehrlichii MLHE-1]
 gi|122312435|sp|Q0ABF1|RS4_ALHEH RecName: Full=30S ribosomal protein S4
 gi|114226037|gb|ABI55836.1| SSU ribosomal protein S4P [Alkalilimnicola ehrlichii MLHE-1]
          Length = 206

 Score = 39.0 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 21/42 (50%)

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
           GFAT+  EAR+ +    +++N  +++   +Q+   D      
Sbjct: 106 GFATTRAEARQLVSHRGVQVNGRVVNVPSMQVSPGDLVGLKE 147


>gi|314922834|gb|EFS86665.1| S4 domain protein [Propionibacterium acnes HL001PA1]
 gi|314966265|gb|EFT10364.1| S4 domain protein [Propionibacterium acnes HL082PA2]
 gi|314980791|gb|EFT24885.1| S4 domain protein [Propionibacterium acnes HL110PA3]
 gi|315090236|gb|EFT62212.1| S4 domain protein [Propionibacterium acnes HL110PA4]
 gi|315093429|gb|EFT65405.1| S4 domain protein [Propionibacterium acnes HL060PA1]
 gi|315102986|gb|EFT74962.1| S4 domain protein [Propionibacterium acnes HL050PA2]
 gi|327327046|gb|EGE68827.1| S4 domain protein [Propionibacterium acnes HL103PA1]
          Length = 71

 Score = 39.0 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 9/46 (19%), Positives = 19/46 (41%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           + L   +  A  A +  +AR  + S  + +N  + +    Q+   D
Sbjct: 2   IRLGQYLKFANLAETGGQARELIASGMVSVNGEVETRRGRQLHPGD 47


>gi|310642769|ref|YP_003947527.1| 30S ribosomal protein s4 [Paenibacillus polymyxa SC2]
 gi|309247719|gb|ADO57286.1| 30S ribosomal protein S4 [Paenibacillus polymyxa SC2]
          Length = 199

 Score = 39.0 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 16/82 (19%), Positives = 27/82 (32%), Gaps = 3/82 (3%)

Query: 320 ATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKI 379
                  F+    +QHM  I+           L  L+ + GFA S   AR+ +    + +
Sbjct: 64  EKQFRTLFNK---AQHMHGIAGENFMFLLESRLDNLVFRLGFANSRAGARQLVAHGHVTV 120

Query: 380 NNSIISNEKLQIKLQDFDSTGN 401
           N   +     Q+   D      
Sbjct: 121 NGKKVDIASYQVSPGDVIGLRE 142


>gi|90413479|ref|ZP_01221471.1| tryptophanyl-tRNA synthetase [Photobacterium profundum 3TCK]
 gi|90325567|gb|EAS42044.1| tryptophanyl-tRNA synthetase [Photobacterium profundum 3TCK]
          Length = 339

 Score = 39.0 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 39/219 (17%), Positives = 69/219 (31%), Gaps = 35/219 (15%)

Query: 45  TASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMR-SQEIQENI 103
           T   LH GHL   +    L +  +    L+     +       D      + S  I   +
Sbjct: 19  TGP-LHLGHLVGSLQQRVLLQEQYDQTVLVADLQGL------TDNGHNPQKVSSNILNVV 71

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL 163
                +          KT   + +    L  +          +  S++R+    +V++ +
Sbjct: 72  ADYLAVG-----INPSKTTICLQSAIPALSELTMY-----YSNLVSISRLERNPTVKNEI 121

Query: 164 KR---EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK--- 217
           K     +S+      Y I QA D       +   L   G DQ   +    ++  RL    
Sbjct: 122 KSKEFGRSIPAGFLTYPISQAADVTA----FKATLIPVGEDQLPMLEQTNEIVRRLNHIA 177

Query: 218 TPKLFALTSPLLTT------ASGT-KMGKTLSGAIWLNK 249
             ++      LL+       A G  KM K++   I L  
Sbjct: 178 QREVLVECKALLSKVSRLPSADGKSKMSKSMGNTIMLGS 216


>gi|85858172|ref|YP_460374.1| 30S ribosomal protein S4P [Syntrophus aciditrophicus SB]
 gi|123515693|sp|Q2LQD0|RS4_SYNAS RecName: Full=30S ribosomal protein S4
 gi|85721263|gb|ABC76206.1| SSU ribosomal protein S4P [Syntrophus aciditrophicus SB]
          Length = 209

 Score = 39.0 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 16/58 (27%), Positives = 27/58 (46%), Gaps = 4/58 (6%)

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           + GFA S NEAR+ ++ N   +N   ++     + + DF          G+KN+ I  
Sbjct: 107 RLGFANSRNEARQLVRHNHFLVNGRKVNIPSFLVNIGDFIEVTE----EGRKNNKIIE 160


>gi|328951538|ref|YP_004368873.1| pseudouridine synthase Rsu [Marinithermus hydrothermalis DSM 14884]
 gi|328451862|gb|AEB12763.1| pseudouridine synthase Rsu [Marinithermus hydrothermalis DSM 14884]
          Length = 243

 Score = 39.0 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 6/55 (10%), Positives = 26/55 (47%), Gaps = 3/55 (5%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL--QDFDSTGNIKL 404
           +  ++   GF  +  E +R L++  ++++  ++ +  +++       +  G + +
Sbjct: 8   IDKILAHLGF-GTRKEVKRLLRAGGVRVDGRVVRDPGMKLDPARARLEVAGEVVV 61


>gi|154498912|ref|ZP_02037290.1| hypothetical protein BACCAP_02904 [Bacteroides capillosus ATCC
           29799]
 gi|150271752|gb|EDM98978.1| hypothetical protein BACCAP_02904 [Bacteroides capillosus ATCC
           29799]
          Length = 200

 Score = 39.0 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 9/44 (20%), Positives = 16/44 (36%)

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
           + GFA +  EAR+ +      +N   +      +K  D      
Sbjct: 97  RLGFANTRREARQLVNHGHFTVNGQRVDIPSYLVKAGDVIEVKE 140


>gi|281354990|ref|ZP_06241484.1| pseudouridine synthase [Victivallis vadensis ATCC BAA-548]
 gi|281317870|gb|EFB01890.1| pseudouridine synthase [Victivallis vadensis ATCC BAA-548]
          Length = 241

 Score = 39.0 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 10/51 (19%), Positives = 20/51 (39%), Gaps = 1/51 (1%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           E      L+ ++  AG A S   A   +K+  + +N   +     ++   D
Sbjct: 2   ENDNRERLVKILSAAGIA-SRRGAGDLIKAGRVTVNGETVFEPGFRVAPGD 51


>gi|71402285|ref|XP_804076.1| tryptophanyl-tRNA synthetase [Trypanosoma cruzi strain CL Brener]
 gi|70866843|gb|EAN82225.1| tryptophanyl-tRNA synthetase, putative [Trypanosoma cruzi]
          Length = 246

 Score = 39.0 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 54/160 (33%), Gaps = 25/160 (15%)

Query: 9   LSILSERGFIHQISN----PRELDILCSQGVVTAYI--GYDLTASSLHAGHLTQLMLLFW 62
           L     RG +    +       +    + G   AY+  G   +A S+H GH+   +L  +
Sbjct: 41  LQHFFRRGIVFSHRDFGAALDCVRASFATGTHRAYLYTGRGPSAQSMHIGHVMPFLLTRY 100

Query: 63  LQKT-GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKT 121
           LQ   G   +  +        D         +   +     +E IK I +    +G    
Sbjct: 101 LQDALGLPLVIQITD------DEKHFFRDIPVSGERASGLVVENIKDIIA----FGFDPR 150

Query: 122 DALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
              +  N  ++  +          +   V RML+  +V++
Sbjct: 151 KTFIFRNTMYMGDMYP--------TVVQVQRMLTLSAVKN 182


>gi|328479049|gb|EGF48515.1| tyrosyl-tRNA synthetase [Lactobacillus rhamnosus MTCC 5462]
          Length = 36

 Score = 39.0 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 8/27 (29%), Positives = 14/27 (51%)

Query: 8  FLSILSERGFIHQISNPRELDILCSQG 34
           L  L  RG ++Q+++   L  L  +G
Sbjct: 9  ILDELKWRGALNQLTDEAGLRKLTEEG 35


>gi|321310936|ref|YP_004193265.1| leucyl-tRNA synthetase [Mycoplasma haemofelis str. Langford 1]
 gi|319802780|emb|CBY93426.1| leucyl-tRNA synthetase [Mycoplasma haemofelis str. Langford 1]
          Length = 711

 Score = 39.0 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 13/73 (17%), Positives = 27/73 (36%), Gaps = 14/73 (19%)

Query: 229 LTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRL---TTLPMSEID 285
           +  + GTKM K+    + +++      + +        ADV+   +     TTL     +
Sbjct: 490 VLGSDGTKMSKSKGNYVNIDE----MIDLYG-------ADVLRLYEAFSGPTTLSFKWEE 538

Query: 286 RMAKLQGKEINEA 298
              K   K + + 
Sbjct: 539 SGMKAMQKWLGKV 551


>gi|315637974|ref|ZP_07893159.1| tryptophan--tRNA ligase [Campylobacter upsaliensis JV21]
 gi|315481822|gb|EFU72441.1| tryptophan--tRNA ligase [Campylobacter upsaliensis JV21]
          Length = 319

 Score = 39.0 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 40/275 (14%), Positives = 76/275 (27%), Gaps = 44/275 (16%)

Query: 41  GYDLTASSLHAGHLT-QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           G   +   LH G+    +  +   Q    +    +    ++    +     +  +     
Sbjct: 6   GLQPSGD-LHIGNFFGAIKPMIEAQDES-EMFIFIANYHAMTSSQNGAVLKQNAL-KAAA 62

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETW-LCSIKYIDLLREIGSFFSVNRMLSFES 158
                 +    S F      K    +     W L     + LL    S+         + 
Sbjct: 63  AFLSLGVDPQKSVFWLQSDVKEVLELY----WILSQFSPMGLLERAHSY--------KDK 110

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
           V   L     L    F+Y +L A D +     +D ++   G DQ  ++    D+  +   
Sbjct: 111 VAKGLPSSHGL----FSYPVLMAADILL----FDTQIVPVGKDQIQHVEIARDIALKANN 162

Query: 219 PKLFALTSP---------LLTTASGTKMGKTLSGAIWL-NKEMTSPYNFWQYW------- 261
                   P         ++    G KM K+    I +   E                  
Sbjct: 163 EWGEIFILPEARVSENVAVVPGTDGAKMSKSYQNTIDIFASEKLRKKQISSIVTDSTPLE 222

Query: 262 --RNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKE 294
             +N  D ++   AK   +    E  +    +G E
Sbjct: 223 EPKNWQDCNIFKIAKLFLSKEKQEELKGRYERGGE 257


>gi|307565246|ref|ZP_07627740.1| pseudouridylate synthase [Prevotella amnii CRIS 21A-A]
 gi|307346059|gb|EFN91402.1| pseudouridylate synthase [Prevotella amnii CRIS 21A-A]
          Length = 528

 Score = 39.0 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 14/71 (19%), Positives = 30/71 (42%), Gaps = 1/71 (1%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           + +  + L   +  AG   S  EA  ++ S  I +N  +++    +I   D        +
Sbjct: 288 DPTEPLRLNKYLANAGVC-SRREADNYISSGQITVNGEVVTELGTKILRTDEIKFKGQTV 346

Query: 405 SFGKKNHIICH 415
           S  KK +++ +
Sbjct: 347 SLEKKVYLLLN 357


>gi|289523341|ref|ZP_06440195.1| ribosomal protein S4 [Anaerobaculum hydrogeniformans ATCC BAA-1850]
 gi|289503033|gb|EFD24197.1| ribosomal protein S4 [Anaerobaculum hydrogeniformans ATCC BAA-1850]
          Length = 140

 Score = 39.0 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 19/41 (46%)

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
           + G A+S  +AR+ +    I +N   +      +K+ D  +
Sbjct: 38  RLGIASSRAQARQLVTHGHITVNGKKLDIPSALVKVGDVIA 78


>gi|256827112|ref|YP_003151071.1| tryptophanyl-tRNA synthetase [Cryptobacterium curtum DSM 15641]
 gi|256583255|gb|ACU94389.1| tryptophanyl-tRNA synthetase [Cryptobacterium curtum DSM 15641]
          Length = 384

 Score = 39.0 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 43/236 (18%), Positives = 66/236 (27%), Gaps = 35/236 (14%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSIIGDPSF-RDESRRMMRSQEIQE 101
            T   LH GH    +     LQ +G      +     +I D     D +      +  Q 
Sbjct: 34  PTGR-LHVGHYVGSLRERVALQNSGTFDEIFI-----MIADAQALTDNADNP--EKVRQN 85

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
            +E      S  I     KT   + +    L  +     +  +              ++ 
Sbjct: 86  IVEVALDYLSCGID--PAKTTIFIQSQIPELFELTSY-YMNLVTVARVQRNPTVKSEIQM 142

Query: 162 R-LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
           R    +    F  F Y I QA D           + +G  DQ   I    ++        
Sbjct: 143 RGFAADVPCGF--FTYPISQASDITAFKA---TTVPVG-VDQLPMIEQTREIVRSFNRTY 196

Query: 221 LFALTSP-----------LLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNI 264
              L  P            L    G  KM K+L   I+L     SP       R++
Sbjct: 197 GPVLIEPEALIPTEESSKRLPGIDGKAKMSKSLGNGIYL---ADSPEEVAAKVRSM 249


>gi|226290430|gb|EEH45914.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18]
          Length = 512

 Score = 39.0 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 19/128 (14%), Positives = 41/128 (32%), Gaps = 32/128 (25%)

Query: 299 KKIIATEITTMVHGRE------------------------------EAEKAATAAMECFD 328
           +K +A  +    HG +                               AE A   +     
Sbjct: 46  QKWLAKSLARTYHGEQVRESQWEKMFCRRLRSVVPMDVNYLARNDGSAESAGRGSGIEGA 105

Query: 329 MSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEK 388
               +   P + ++   + R + +   I +A FA+ST +AR+ +   ++ +N   +    
Sbjct: 106 GPRKAPLTPYMQMAFAPLERRLDVA--IFRAMFASSTRQARQFVLHGSVTVNGKKMKYPG 163

Query: 389 LQIKLQDF 396
             +   D 
Sbjct: 164 YLLNPGDL 171


>gi|225682980|gb|EEH21264.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
          Length = 513

 Score = 39.0 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 19/128 (14%), Positives = 41/128 (32%), Gaps = 32/128 (25%)

Query: 299 KKIIATEITTMVHGRE------------------------------EAEKAATAAMECFD 328
           +K +A  +    HG +                               AE A   +     
Sbjct: 46  QKWLAKSLARTYHGEQVRESQWEKMFCRRLRSVVPMDVNYLARNDGSAESAGRGSGIEGA 105

Query: 329 MSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEK 388
               +   P + ++   + R + +   I +A FA+ST +AR+ +   ++ +N   +    
Sbjct: 106 GPRKAPLTPYMQMAFAPLERRLDVA--IFRAMFASSTRQARQFVLHGSVTVNGKKMKYPG 163

Query: 389 LQIKLQDF 396
             +   D 
Sbjct: 164 YLLNPGDL 171


>gi|150406488|ref|YP_001315127.1| ribosomal protein S4 [Chlorokybus atmophyticus]
 gi|126507725|gb|ABO15122.1| ribosomal protein S4 [Chlorokybus atmophyticus]
          Length = 267

 Score = 39.0 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 17/107 (15%), Positives = 48/107 (44%), Gaps = 6/107 (5%)

Query: 292 GKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMG 351
            K+ N +K++IA +  + ++G  +        ++ F     ++ +         + R + 
Sbjct: 44  EKQSNYSKELIARQKLSAIYGNLK----RDTFIKLFKKGRRARQVKLPDTFLSLLERRLD 99

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
           ++  +++  + ++ +EAR+ +    I +NN  ++     +K  D  S
Sbjct: 100 VV--LLRLKYCSTLSEARQLISHKKILVNNETVNISSYLLKNGDLIS 144


>gi|331268441|ref|YP_004394933.1| 30S ribosomal protein S4 [Clostridium botulinum BKT015925]
 gi|329124991|gb|AEB74936.1| ribosomal protein S4 [Clostridium botulinum BKT015925]
          Length = 206

 Score = 39.0 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 10/52 (19%), Positives = 22/52 (42%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
           M L  ++ + GF +S +EAR+ +      +N   +     ++   D  +   
Sbjct: 98  MRLDNVVYRLGFGSSRSEARQLVTHGHFLVNGKKVDIASFKVSAGDVITVRE 149


>gi|319779369|ref|YP_004130282.1| Tryptophanyl-tRNA synthetase [Taylorella equigenitalis MCE9]
 gi|317109393|gb|ADU92139.1| Tryptophanyl-tRNA synthetase [Taylorella equigenitalis MCE9]
          Length = 450

 Score = 39.0 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 22/103 (21%), Positives = 40/103 (38%), Gaps = 16/103 (15%)

Query: 157 ESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL 216
           ++V   L  ++ +S   ++Y IL A D + L   ++  +   G DQ  ++     + +R 
Sbjct: 120 QNVERELDVDEGVSMGLYSYPILMAADIL-LFNAHEVPV---GKDQVQHLEMTRFIAQRF 175

Query: 217 K-----TPKLFAL-------TSPLLTTASGTKMGKTLSGAIWL 247
                    +F L           L    G KM K+ +  I L
Sbjct: 176 NHHYAKDEDIFVLPEAKIDEEVATLPGLDGRKMSKSYNNTIPL 218


>gi|311693777|gb|ADP96650.1| pseudouridine synthase family 1 protein [marine bacterium HP15]
          Length = 312

 Score = 39.0 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 9/48 (18%), Positives = 18/48 (37%), Gaps = 1/48 (2%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
           I ++G   S  EA R+++   + IN    +     +        G + 
Sbjct: 13  ISESGMC-SRREADRYIEQGNVYINGKRATVGDQVLPGDTVKVNGQVI 59


>gi|302382584|ref|YP_003818407.1| RNA-binding S4 domain protein [Brevundimonas subvibrioides ATCC
           15264]
 gi|302193212|gb|ADL00784.1| RNA-binding S4 domain protein [Brevundimonas subvibrioides ATCC
           15264]
          Length = 251

 Score = 39.0 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 6/50 (12%), Positives = 20/50 (40%), Gaps = 1/50 (2%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
           +      +   + ++G   S  EA   +    + I+  ++++   +I+  
Sbjct: 8   DGPEPSRINKWLGQSGVC-SRREADALIADGLVSIDGEVVTDAGRKIEPG 56


>gi|284031725|ref|YP_003381656.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Kribbella flavida DSM 17836]
 gi|310947189|sp|D2PPT3|MSHC_KRIFD RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|283811018|gb|ADB32857.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Kribbella flavida DSM 17836]
          Length = 406

 Score = 39.0 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 11/62 (17%), Positives = 21/62 (33%), Gaps = 3/62 (4%)

Query: 193 CRLQMGGSDQWG--NIICGIDLGERLKTPK-LFALTSPLLTTASGTKMGKTLSGAIWLNK 249
             +Q GGSD     + +   +            A     +    G KM K+    + +++
Sbjct: 241 IDVQGGGSDLIFPHHEMSASEAQCATGQHPFARAYVHQAMVGLDGEKMSKSKGNLVLVSR 300

Query: 250 EM 251
           E 
Sbjct: 301 ER 302


>gi|225175647|ref|ZP_03729641.1| ribosomal protein S4 [Dethiobacter alkaliphilus AHT 1]
 gi|225168976|gb|EEG77776.1| ribosomal protein S4 [Dethiobacter alkaliphilus AHT 1]
          Length = 209

 Score = 39.0 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 18/42 (42%)

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
           GFA S  EAR+ +K     +N   +     Q++  D  +   
Sbjct: 109 GFALSRPEARQLVKHGHFTVNGRKVDIPSYQVRPDDVVAVRE 150


>gi|71910124|ref|YP_281674.1| ribosomal large subunit pseudouridine synthase B [Streptococcus
           pyogenes MGAS5005]
 gi|71852906|gb|AAZ50929.1| ribosomal large subunit pseudouridine synthase B [Streptococcus
           pyogenes MGAS5005]
          Length = 248

 Score = 39.0 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 19/40 (47%), Gaps = 1/40 (2%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           I  AG A S  +A   +K   + +N  +I++    +K  D
Sbjct: 15  IAHAGIA-SRRKAEELIKQGLVTLNGQVITDLATTVKSGD 53


>gi|119716692|ref|YP_923657.1| phenylalanyl-tRNA synthetase beta subunit [Nocardioides sp. JS614]
 gi|119537353|gb|ABL81970.1| phenylalanyl-tRNA synthetase beta subunit [Nocardioides sp. JS614]
          Length = 827

 Score = 39.0 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 21/47 (44%), Gaps = 7/47 (14%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFR 87
           G+D TA        T   +   LQ+ G +PISL    T+ +   + R
Sbjct: 233 GFDPTAP-------TPGWMARRLQQCGMRPISLAVDVTNYVMLETGR 272


>gi|256825221|ref|YP_003149181.1| cysteinyl-tRNA synthetase [Kytococcus sedentarius DSM 20547]
 gi|310947190|sp|C7NHQ9|MSHC_KYTSD RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|256688614|gb|ACV06416.1| cysteinyl-tRNA synthetase [Kytococcus sedentarius DSM 20547]
          Length = 438

 Score = 39.0 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 21/148 (14%), Positives = 39/148 (26%), Gaps = 15/148 (10%)

Query: 195 LQMGGSDQWGNIICGIDLGERLKTPKLFA--LTSPLLTTASGTKMGKTLSGAIWLNKEMT 252
           +Q GG D             R  T   FA       +    G KM K+    + +++   
Sbjct: 256 VQGGGDDLVFPHHEMSAAQTRALTDDAFAEHYVHQAMVGLDGEKMSKSKGNLVLVSRLRA 315

Query: 253 ---SPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTM 309
               P        +        +    T   +       +   +  + A+   A+  T  
Sbjct: 316 AGEDPAAIRLALLSQHYRTAWEW----TDAHLE---AARQRLDRWRHAAQTATASPSTA- 367

Query: 310 VHGREEAEKAATAAMECFDMSIHSQHMP 337
               E+A      A +  +        P
Sbjct: 368 --DAEDAPAGDAVARQLAERIADDLDAP 393


>gi|126654182|ref|ZP_01725989.1| tryptophanyl-tRNA synthetase [Bacillus sp. B14905]
 gi|126589353|gb|EAZ83506.1| tryptophanyl-tRNA synthetase [Bacillus sp. B14905]
          Length = 329

 Score = 39.0 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 44/248 (17%), Positives = 78/248 (31%), Gaps = 37/248 (14%)

Query: 35  VVTAYIGYDLTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGG-GTSIIGDPSFRDESRR 92
           + T + G   T   +  G+       F  LQ  G     ++     ++  DP    E R 
Sbjct: 1   MTTIFSGVQPTGI-VTLGNYLGAFKQFPALQDEGDAIYCIVDQHAITVAQDP---KELRE 56

Query: 93  MMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNR 152
            +R          I    S+          A       W        +L+ + S   + R
Sbjct: 57  SIRKLAATYIATGIDPKKSTLFIQSEVPAHAQ----AGW--------MLQCVASIGELER 104

Query: 153 MLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL 212
           M      + +   ++S+S     Y  L A D +     Y+  +   G DQ  +I    DL
Sbjct: 105 MTQ---FKDKSHGKESVSAALLTYPPLMAADILL----YNTNIVPVGDDQKQHIELTRDL 157

Query: 213 GERLKTPKLFALTSPLLTTASG-----------TKMGKTLSGAIWLNKEMTSPYNFWQYW 261
            ER        LT P +                 KM K+        + + +  +  +  
Sbjct: 158 AERFNKRYGDVLTIPEIQLPKAGARIKSLQEPTKKMSKSDPNTKATIRLLDTAKDIEKKI 217

Query: 262 RN-IDDAD 268
           ++ + D+D
Sbjct: 218 KSAVTDSD 225


>gi|213964948|ref|ZP_03393147.1| ribosomal protein S4 [Corynebacterium amycolatum SK46]
 gi|213952484|gb|EEB63867.1| ribosomal protein S4 [Corynebacterium amycolatum SK46]
          Length = 201

 Score = 39.0 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 19/45 (42%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
            ++ +AG A +  +AR+ +      +N   I+    Q+   D   
Sbjct: 95  NVVYRAGLARTRRQARQLVSHGHFTVNGKKINVPSFQVSQYDIID 139


>gi|94968356|ref|YP_590404.1| leucyl-tRNA synthetase [Candidatus Koribacter versatilis Ellin345]
 gi|94550406|gb|ABF40330.1| leucyl-tRNA synthetase [Candidatus Koribacter versatilis Ellin345]
          Length = 856

 Score = 39.0 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 24/131 (18%), Positives = 45/131 (34%), Gaps = 30/131 (22%)

Query: 210 IDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYN-----FWQYWRNI 264
            DLG    +  +  L +  +    G KM K L   +  + +M + Y       +  +   
Sbjct: 583 RDLGLVHNSEPVTRLFTQGMVIKDGAKMSKNLGNVVAPD-DMIAKYGADATRMYTLFAAP 641

Query: 265 DDAD----------VVSFAKRLTTL--------------PMSEIDRMAKLQGKEINEAKK 300
            D D          V  F  R+  L               ++E+   AK   +++++  K
Sbjct: 642 PDRDLDWQDAGVEGVSRFLARVYRLIAQNPIVHAGPAHYTLAELPANAKKIARKLHQTIK 701

Query: 301 IIATEITTMVH 311
            I+ E+    H
Sbjct: 702 RISDELGGRWH 712


>gi|50913682|ref|YP_059654.1| ribosomal large subunit pseudouridine synthase B [Streptococcus
           pyogenes MGAS10394]
 gi|50902756|gb|AAT86471.1| Ribosomal large subunit pseudouridine synthase B [Streptococcus
           pyogenes MGAS10394]
          Length = 248

 Score = 39.0 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 19/40 (47%), Gaps = 1/40 (2%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           I  AG A S  +A   +K   + +N  +I++    +K  D
Sbjct: 15  IAHAGIA-SRRKAEELIKQGLVTLNGQVITDLATTVKSGD 53


>gi|19745526|ref|NP_606662.1| hypothetical protein spyM18_0418 [Streptococcus pyogenes MGAS8232]
 gi|71902965|ref|YP_279768.1| ribosomal large subunit pseudouridine synthase B [Streptococcus
           pyogenes MGAS6180]
 gi|94987940|ref|YP_596041.1| ribosomal large subunit pseudouridine synthase B [Streptococcus
           pyogenes MGAS9429]
 gi|94989814|ref|YP_597914.1| ribosomal large subunit pseudouridine synthase B [Streptococcus
           pyogenes MGAS10270]
 gi|94993700|ref|YP_601798.1| ribosomal large subunit pseudouridine synthase B [Streptococcus
           pyogenes MGAS10750]
 gi|19747645|gb|AAL97161.1| putative hypothetical protein [Streptococcus pyogenes MGAS8232]
 gi|71802060|gb|AAX71413.1| ribosomal large subunit pseudouridine synthase B [Streptococcus
           pyogenes MGAS6180]
 gi|94541448|gb|ABF31497.1| ribosomal large subunit pseudouridine synthase B [Streptococcus
           pyogenes MGAS9429]
 gi|94543322|gb|ABF33370.1| Ribosomal large subunit pseudouridine synthase B [Streptococcus
           pyogenes MGAS10270]
 gi|94547208|gb|ABF37254.1| Ribosomal large subunit pseudouridine synthase B [Streptococcus
           pyogenes MGAS10750]
          Length = 248

 Score = 39.0 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 19/40 (47%), Gaps = 1/40 (2%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           I  AG A S  +A   +K   + +N  +I++    +K  D
Sbjct: 15  IAHAGIA-SRRKAEELIKQGLVTLNGQVITDLATTVKSGD 53


>gi|308069706|ref|YP_003871311.1| 30S ribosomal protein S4 [Paenibacillus polymyxa E681]
 gi|305858985|gb|ADM70773.1| 30S ribosomal protein S4 [Paenibacillus polymyxa E681]
          Length = 199

 Score = 39.0 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 16/82 (19%), Positives = 27/82 (32%), Gaps = 3/82 (3%)

Query: 320 ATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKI 379
                  F+    +QHM  I+           L  L+ + GFA S   AR+ +    + +
Sbjct: 64  EKQFRTLFNK---AQHMHGIAGENFMFLLESRLDNLVFRLGFANSRAGARQLVAHGHVTV 120

Query: 380 NNSIISNEKLQIKLQDFDSTGN 401
           N   +     Q+   D      
Sbjct: 121 NGKKVDIASYQVSPGDVIGLRE 142


>gi|295702844|ref|YP_003595919.1| tryptophanyl-tRNA synthetase [Bacillus megaterium DSM 319]
 gi|294800503|gb|ADF37569.1| tryptophanyl-tRNA synthetase [Bacillus megaterium DSM 319]
          Length = 328

 Score = 39.0 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 51/325 (15%), Positives = 96/325 (29%), Gaps = 56/325 (17%)

Query: 37  TAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRS 96
           T + G   + + +  G+    M  F   +  +     +    + I  P  R   R+ +RS
Sbjct: 3   TIFSGIQPSGT-ITLGNYIGAMKQFVELQHDYNCHFCIVDQHA-ITAPQDRLALRKNIRS 60

Query: 97  QEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSF 156
                    I    S+                  W+  ++ +  + E+       RM   
Sbjct: 61  LAALYVAVGIDPAKSTLFIQSEVPAHTE----AGWM--LQCVAYIGEL------ERMTQ- 107

Query: 157 ESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL 216
              + +   ++++S     Y  L A D +     Y+  L   G DQ  ++    DL ER 
Sbjct: 108 --FKDKSAGKEAVSAGLLTYPPLMAADILL----YNTDLVPVGEDQKQHLELTRDLAERF 161

Query: 217 KTPKLFALTSPLLTTAS-G----------TKMGKTLSGAIWLNKEMTSPYNFWQYWRN-I 264
                   T P +     G           KM K+          +       +  ++ +
Sbjct: 162 NKKYNDIFTIPEVRIPKVGARVMSLQDPTKKMSKSDPNQKAFITLLDDAKTIEKKIKSAV 221

Query: 265 DDAD-VVSFAK--------------RLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTM 309
            D++ +V + K               L    + +I+ M   +GK   + K   A  +   
Sbjct: 222 TDSEGIVRYDKENKPGISNLLSIYSILANKSIEDIEAMY--EGKGYGDFKADTAKVV--- 276

Query: 310 VHGREEAEKAATAAMECFDMSIHSQ 334
               E          E  D S    
Sbjct: 277 ---AEALAPIQERYYELVDSSELDD 298


>gi|59410396|gb|AAW84295.1| putative isoleucyl-tRNA synthetase [uncultured Poribacteria
           bacterium 64K2]
          Length = 1060

 Score = 39.0 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 17/89 (19%), Positives = 27/89 (30%), Gaps = 11/89 (12%)

Query: 186 ELAKNYDCRLQMGGSDQ---WGNIICGIDLGERLKTPKLF--ALTSPLLTTASGTKMGKT 240
            L + Y         DQ   W   +     G  L     +   L   L+    G KM K+
Sbjct: 553 MLEQAYPADFISEAIDQTRGWFYSLLAT--GTLLYDKPAYKNCLCLELIMGPDGQKMSKS 610

Query: 241 LSGAI--W--LNKEMTSPYNFWQYWRNID 265
               I  W  LN++      ++ +     
Sbjct: 611 RGNTIDPWTILNEQGADAMRWYMFTATTP 639


>gi|82705186|ref|XP_726865.1| tryptophanyl-tRNA synthetase [Plasmodium yoelii yoelii str. 17XNL]
 gi|23482449|gb|EAA18430.1| tryptophanyl-tRNA synthetase, putative [Plasmodium yoelii yoelii]
          Length = 687

 Score = 39.0 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 40/236 (16%), Positives = 79/236 (33%), Gaps = 39/236 (16%)

Query: 25  RELDILCS----QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSI 80
           R+LD L +          Y G   ++ S+H GHL       +LQ   + P+ +       
Sbjct: 325 RDLDFLLNYYEKNKSFYIYTGRGPSSLSMHLGHLIPFYFCKYLQDAFNVPLII------- 377

Query: 81  IGDPSFRDESRRMMRSQEIQENIEKIKG-IFSSFIKYGTGKTDALMLNNETWLCSIKYID 139
                  D+ + +       + I K+        I  G       +  N  ++ ++    
Sbjct: 378 ----QISDDEKFLFNKNYSLDYINKLSKENVKDIIAVGLNPELTFIFKNTQYVHNLYNT- 432

Query: 140 LLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ-AYDFVE-----LAKNYDC 193
            +  I    ++N+ ++          + S +  + +Y   Q A  F +     L +N  C
Sbjct: 433 -VLSIHKKTTLNQSMNIFGF------DHSDNIGKISYPSFQIAPCFSQCFPNFLPQNLPC 485

Query: 194 RLQMGGSDQWGNIICGIDL-GERLKTPKL--FALTSPLLTTASGTKMG----KTLS 242
            +  G  DQ        D+  +      +   ++  P L   + TKM     K+  
Sbjct: 486 LVPQG-IDQDPYFRLSRDIAVKLALHKPVVIHSIFMPSLLGVN-TKMSSTKKKSEK 539


>gi|312876014|ref|ZP_07736003.1| hemolysin A [Caldicellulosiruptor lactoaceticus 6A]
 gi|311797212|gb|EFR13552.1| hemolysin A [Caldicellulosiruptor lactoaceticus 6A]
          Length = 269

 Score = 39.0 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 10/40 (25%), Positives = 17/40 (42%)

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
           L+V+ G   S  +A+  + S  + +NN  I      I   
Sbjct: 8   LLVEKGLVESREKAKALILSGNVYVNNQKIEKAGEMIDES 47


>gi|310829557|ref|YP_003961914.1| ribosomal protein S4 [Eubacterium limosum KIST612]
 gi|308741291|gb|ADO38951.1| ribosomal protein S4 [Eubacterium limosum KIST612]
          Length = 209

 Score = 39.0 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 19/109 (17%), Positives = 39/109 (35%), Gaps = 14/109 (12%)

Query: 292 GKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMG 351
           G ++ E +K+        ++G  E + A    +      I   ++  I            
Sbjct: 55  GLQLREKQKV------KRIYGVLEKQFAHYFDLAEKQKGITGSNLLEI--------LETR 100

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG 400
           L  ++ + G ATS  EAR+ ++     +N   ++     +K  D     
Sbjct: 101 LDNVVYRLGLATSRKEARQLVQHAHFLVNGKKVNVPSYLVKEGDTIEVK 149


>gi|269961576|ref|ZP_06175938.1| Ribosomal large subunit pseudouridine synthase F [Vibrio harveyi
           1DA3]
 gi|269833617|gb|EEZ87714.1| Ribosomal large subunit pseudouridine synthase F [Vibrio harveyi
           1DA3]
          Length = 384

 Score = 39.0 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 17/46 (36%), Gaps = 1/46 (2%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
           I + GF  S  EA R ++   + IN          +   D    GN
Sbjct: 13  ISETGFC-SRREADRLIEQGRVTINGQQPEMGTKVLPGDDVCVDGN 57


>gi|302528005|ref|ZP_07280347.1| pseudouridylate synthase ribosomal large subunit [Streptomyces sp.
           AA4]
 gi|302436900|gb|EFL08716.1| pseudouridylate synthase ribosomal large subunit [Streptomyces sp.
           AA4]
          Length = 250

 Score = 39.0 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 6/55 (10%), Positives = 26/55 (47%), Gaps = 1/55 (1%)

Query: 341 ISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           ++ ++   G+ L  ++ +AG   S   A   + +  ++++  +++    ++   +
Sbjct: 1   MTSEQHPDGIRLQKVLSQAG-VASRRAAEDLIAAGRVEVDGEVVTELGRRVHPDE 54


>gi|168187786|ref|ZP_02622421.1| ribosomal protein S4 [Clostridium botulinum C str. Eklund]
 gi|169294366|gb|EDS76499.1| ribosomal protein S4 [Clostridium botulinum C str. Eklund]
          Length = 206

 Score = 39.0 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 15/61 (24%), Positives = 22/61 (36%), Gaps = 8/61 (13%)

Query: 349 GMGLLTLI--------VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG 400
           G  LL L+         K GF +S  EAR+ +      +N   +     Q+   D  S  
Sbjct: 89  GENLLKLLEMRLDNVVYKLGFGSSRAEARQLVTHGHFLVNGKKVDIISYQVSAGDVISVR 148

Query: 401 N 401
            
Sbjct: 149 E 149


>gi|325689346|gb|EGD31352.1| tryptophan--tRNA ligase [Streptococcus sanguinis SK115]
          Length = 341

 Score = 39.0 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 41/232 (17%), Positives = 63/232 (27%), Gaps = 48/232 (20%)

Query: 44  LTASSLHAGHLTQ-LMLLFWLQKTGHKPISLM----GGGTSIIGDPSFRDESRRMMRSQE 98
            T   LH GH    L     LQ  G   + +        T    DP              
Sbjct: 12  PTGK-LHIGHYVGSLRNRVLLQDQGKYEMFVFLADQQALTDHAKDPQ------------- 57

Query: 99  IQENIEKIKGIFSSFIK--YGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSF 156
               +E I  +   ++       K    + +    L  +    +     +    N  +  
Sbjct: 58  --TIVESIGNVALDYLAAGLDPEKVTIFIQSQIPELAELSMYYMNLVSLARLERNPTVKT 115

Query: 157 ESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL 216
           E  +          FL   Y I QA D      N+   + +G  DQ   I    ++    
Sbjct: 116 EIAQKGFGESLPTGFL--VYPISQAADITAFKANF---VPVG-HDQKPMIEQTREIVRSF 169

Query: 217 KTPKLFALTSPL---------------LTTASGT-KMGKTLSGAIWLNKEMT 252
                   T  L               L    G  KM K+L+  I+L  +M 
Sbjct: 170 NHAYQ---TDVLVEPEGIYPENEAAGRLPGLDGNAKMSKSLNNGIYLADDMD 218


>gi|320352938|ref|YP_004194277.1| 30S ribosomal protein S4P [Desulfobulbus propionicus DSM 2032]
 gi|320121440|gb|ADW16986.1| SSU ribosomal protein S4P [Desulfobulbus propionicus DSM 2032]
          Length = 209

 Score = 39.0 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 17/108 (15%), Positives = 47/108 (43%), Gaps = 14/108 (12%)

Query: 294 EINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLL 353
           ++ E +K+        ++G  EA+         F+ +  ++ +   ++    +     L 
Sbjct: 57  QLREKQKV------KQMYGMLEAQ-----FRRYFERAERAKGVTGETL---LIMLERRLD 102

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
            ++ ++GFA+S ++AR+ ++ N   +N   ++    Q+   D  +   
Sbjct: 103 NVLYRSGFASSRDQARQMVRHNLFTLNGKKVNIPSHQVNAGDIIALKE 150


>gi|312793471|ref|YP_004026394.1| hemolysin a [Caldicellulosiruptor kristjanssonii 177R1B]
 gi|312180611|gb|ADQ40781.1| hemolysin A [Caldicellulosiruptor kristjanssonii 177R1B]
          Length = 269

 Score = 39.0 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 10/40 (25%), Positives = 17/40 (42%)

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
           L+V+ G   S  +A+  + S  + +NN  I      I   
Sbjct: 8   LLVEKGLVESREKAKALILSGNVYVNNQKIEKAGEMIDES 47


>gi|194366722|ref|YP_002029332.1| RNA-binding S4 domain-containing protein [Stenotrophomonas
           maltophilia R551-3]
 gi|194349526|gb|ACF52649.1| RNA-binding S4 domain protein [Stenotrophomonas maltophilia R551-3]
          Length = 232

 Score = 39.0 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 5/30 (16%), Positives = 14/30 (46%)

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
             EARR+++   + +N  ++   +  +   
Sbjct: 18  RGEARRYIEGGWVSVNGEVVEQPQRPVDES 47


>gi|118444508|ref|YP_877226.1| 30S ribosomal protein S4 [Clostridium novyi NT]
 gi|152060917|sp|A0PXX4|RS4A_CLONN RecName: Full=30S ribosomal protein S4 A
 gi|118134964|gb|ABK62008.1| ribosomal protein S4 [Clostridium novyi NT]
          Length = 206

 Score = 39.0 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 15/61 (24%), Positives = 22/61 (36%), Gaps = 8/61 (13%)

Query: 349 GMGLLTLI--------VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG 400
           G  LL L+         K GF +S  EAR+ +      +N   +     Q+   D  S  
Sbjct: 89  GENLLKLLEMRLDNVVYKLGFGSSRAEARQLVTHGHFLVNGKKVDIISYQVSAGDVISVR 148

Query: 401 N 401
            
Sbjct: 149 E 149


>gi|296141063|ref|YP_003648306.1| ribosomal protein S4 [Tsukamurella paurometabola DSM 20162]
 gi|296029197|gb|ADG79967.1| ribosomal protein S4 [Tsukamurella paurometabola DSM 20162]
          Length = 201

 Score = 39.0 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 7/45 (15%), Positives = 18/45 (40%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
            ++ +AG A +  +AR+ +      +N   +     ++   D   
Sbjct: 95  NVVYRAGLARTRRQARQLVTHGHFTVNGVRVDVPSYRVSQYDIID 139


>gi|125719149|ref|YP_001036282.1| tryptophanyl-tRNA synthetase II [Streptococcus sanguinis SK36]
 gi|125499066|gb|ABN45732.1| Tryptophanyl-tRNA synthetase, putative [Streptococcus sanguinis
           SK36]
          Length = 341

 Score = 39.0 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 41/232 (17%), Positives = 63/232 (27%), Gaps = 48/232 (20%)

Query: 44  LTASSLHAGHLTQ-LMLLFWLQKTGHKPISLM----GGGTSIIGDPSFRDESRRMMRSQE 98
            T   LH GH    L     LQ  G   + +        T    DP              
Sbjct: 12  PTGK-LHIGHYVGSLRNRVLLQDQGKYEMFVFLADQQALTDHAKDPQ------------- 57

Query: 99  IQENIEKIKGIFSSFIK--YGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSF 156
               +E I  +   ++       K    + +    L  +    +     +    N  +  
Sbjct: 58  --TIVESIGNVALDYLAAGLDPEKVTIFIQSQIPELAELSMYYMNLVSLARLERNPTVKT 115

Query: 157 ESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL 216
           E  +          FL   Y I QA D      N+   + +G  DQ   I    ++    
Sbjct: 116 EIAQKGFGESLPTGFL--VYPISQAADITAFKANF---VPVG-HDQKPMIEQTREIVRSF 169

Query: 217 KTPKLFALTSPL---------------LTTASGT-KMGKTLSGAIWLNKEMT 252
                   T  L               L    G  KM K+L+  I+L  +M 
Sbjct: 170 NHAYQ---TDVLVEPEGIYPENEAAGRLPGLDGNAKMSKSLNNGIYLADDMD 218


>gi|113477614|ref|YP_723675.1| RNA-binding S4 [Trichodesmium erythraeum IMS101]
 gi|110168662|gb|ABG53202.1| RNA-binding S4 [Trichodesmium erythraeum IMS101]
          Length = 259

 Score = 39.0 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 17/71 (23%), Positives = 27/71 (38%), Gaps = 6/71 (8%)

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDST-GNIKLSFG---- 407
           L  +  AGF  S ++    +    +++N   IS     +K  D  +  G  +L  G    
Sbjct: 186 LDAVASAGFGMSRSKMVDLIDGGDVRVNWKEISQASYTVKTGDLIAIRGKGRLEVGDIAI 245

Query: 408 -KKNHIICHLC 417
            KK     HL 
Sbjct: 246 TKKERYRVHLT 256


>gi|255994248|ref|ZP_05427383.1| isoleucine--tRNA ligase [Eubacterium saphenum ATCC 49989]
 gi|255993916|gb|EEU04005.1| isoleucine--tRNA ligase [Eubacterium saphenum ATCC 49989]
          Length = 1040

 Score = 39.0 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 20/112 (17%), Positives = 37/112 (33%), Gaps = 17/112 (15%)

Query: 168 SLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQ---WGNIICGIDLGERLKTPKLFAL 224
           S+ F +F+Y       F    +++       G DQ   W   +  I      K P    L
Sbjct: 528 SMPFAQFHYPFENEEKF---KESFPASFICEGIDQTRGWFYSLMAISTFIMGKAPYKNVL 584

Query: 225 TSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRL 276
            + L+    G KM K+    +        P+  +  + +    D + +    
Sbjct: 585 VNDLILDKHGKKMSKSKGNTV-------DPFELFSKYGS----DSLRWYMLY 625


>gi|256826599|ref|YP_003150558.1| 30S ribosomal protein S4P [Cryptobacterium curtum DSM 15641]
 gi|256582742|gb|ACU93876.1| SSU ribosomal protein S4P [Cryptobacterium curtum DSM 15641]
          Length = 197

 Score = 39.0 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 18/114 (15%), Positives = 41/114 (35%), Gaps = 14/114 (12%)

Query: 285 DRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKD 344
            R     G ++ E +K         ++G +E           F  +     +   ++   
Sbjct: 36  RRKESEYGMQLREKQKA------KFIYGVQE-----KQFRGYFRRAKSQSGITGENLMAI 84

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
             SR   ++    + GFA +  EAR+ +    I +N + +     +++  D  +
Sbjct: 85  LESRLDNIV---FRLGFARTRREARQTVTHGHITVNGNRVDIPSYRVRPGDLIA 135


>gi|194289952|ref|YP_002005859.1| ribosomal large subunit pseudouridine synthase b [Cupriavidus
           taiwanensis LMG 19424]
 gi|193223787|emb|CAQ69794.1| Ribosomal large subunit pseudouridine synthase B [Cupriavidus
           taiwanensis LMG 19424]
          Length = 613

 Score = 39.0 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 18/104 (17%), Positives = 36/104 (34%), Gaps = 17/104 (16%)

Query: 288 AKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISI------ 341
           A+ QG+  +  K   A +      G+  A+KAA ++ + F   I  Q+    ++      
Sbjct: 153 ARQQGRRKDGGKPQAARK------GQGGADKAAASSEDLFRFVISEQYDSEDTVIPRTKA 206

Query: 342 ----SKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINN 381
                         L  ++ + G   S  E    +    + +N 
Sbjct: 207 KPVRELSAEDDAPKLHKVLAEGGL-GSRREMEELILQGRVSVNG 249


>gi|149185282|ref|ZP_01863599.1| S4 domain protein [Erythrobacter sp. SD-21]
 gi|148831393|gb|EDL49827.1| S4 domain protein [Erythrobacter sp. SD-21]
          Length = 85

 Score = 39.0 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 11/58 (18%), Positives = 23/58 (39%), Gaps = 3/58 (5%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS---TGNIKL 404
           M +  L+    F  + + AR+ +    I+ N   +      I + D  +     ++KL
Sbjct: 1   MRIDRLLCTLRFVRTRSAARKLVDQGHIRRNGERVLRPSRDIAVGDVLTLPVGRHVKL 58


>gi|325698040|gb|EGD39921.1| tryptophan--tRNA ligase [Streptococcus sanguinis SK160]
          Length = 341

 Score = 39.0 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 41/232 (17%), Positives = 63/232 (27%), Gaps = 48/232 (20%)

Query: 44  LTASSLHAGHLTQ-LMLLFWLQKTGHKPISLM----GGGTSIIGDPSFRDESRRMMRSQE 98
            T   LH GH    L     LQ  G   + +        T    DP              
Sbjct: 12  PTGK-LHIGHYVGSLRNRVLLQDQGKYEMFVFLADQQALTDHAKDPQ------------- 57

Query: 99  IQENIEKIKGIFSSFIK--YGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSF 156
               +E I  +   ++       K    + +    L  +    +     +    N  +  
Sbjct: 58  --TIVESIGNVALDYLAAGLDPEKVTIFIQSQIPELAELSMYYMNLVSLARLERNPTVKT 115

Query: 157 ESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL 216
           E  +          FL   Y I QA D      N+   + +G  DQ   I    ++    
Sbjct: 116 EIAQKGFGESLPTGFL--VYPISQAADITAFKANF---VPVG-HDQKPMIEQTREIVRSF 169

Query: 217 KTPKLFALTSPL---------------LTTASGT-KMGKTLSGAIWLNKEMT 252
                   T  L               L    G  KM K+L+  I+L  +M 
Sbjct: 170 NHAYQ---TDVLVEPEGIYPENEAAGRLPGLDGNAKMSKSLNNGIYLADDMD 218


>gi|323350820|ref|ZP_08086479.1| tryptophan--tRNA ligase [Streptococcus sanguinis VMC66]
 gi|322122994|gb|EFX94697.1| tryptophan--tRNA ligase [Streptococcus sanguinis VMC66]
 gi|332363596|gb|EGJ41377.1| tryptophan--tRNA ligase [Streptococcus sanguinis SK1059]
          Length = 341

 Score = 39.0 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 41/232 (17%), Positives = 63/232 (27%), Gaps = 48/232 (20%)

Query: 44  LTASSLHAGHLTQ-LMLLFWLQKTGHKPISLM----GGGTSIIGDPSFRDESRRMMRSQE 98
            T   LH GH    L     LQ  G   + +        T    DP              
Sbjct: 12  PTGK-LHIGHYVGSLRNRVLLQDQGKYEMFVFLADQQALTDHAKDPQ------------- 57

Query: 99  IQENIEKIKGIFSSFIK--YGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSF 156
               +E I  +   ++       K    + +    L  +    +     +    N  +  
Sbjct: 58  --TIVESIGNVALDYLAAGLDPEKVTIFIQSQIPELAELSMYYMNLVSLARLERNPTVKT 115

Query: 157 ESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL 216
           E  +          FL   Y I QA D      N+   + +G  DQ   I    ++    
Sbjct: 116 EIAQKGFGESLPTGFL--VYPISQAADITAFKANF---VPVG-HDQKPMIEQTREIVRSF 169

Query: 217 KTPKLFALTSPL---------------LTTASGT-KMGKTLSGAIWLNKEMT 252
                   T  L               L    G  KM K+L+  I+L  +M 
Sbjct: 170 NHAYQ---TDVLVEPEGIYPENEAAGRLPGLDGNAKMSKSLNNGIYLADDMD 218


>gi|309356566|emb|CAP36935.2| hypothetical protein CBG_19783 [Caenorhabditis briggsae AF16]
          Length = 1232

 Score = 39.0 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 33/194 (17%), Positives = 64/194 (32%), Gaps = 17/194 (8%)

Query: 50  HAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKG- 108
           H G+L  +  +    + G K   L     + +   + +           ++  +   +  
Sbjct: 576 HVGYLVPMRKIADFLQAGLKVTILFADLHAYL--DNMKS------TWDVLKSRVVYYQKV 627

Query: 109 IFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFE-SVRSRLKREQ 167
           I +                   +     Y D + ++ +  S+   L     V  +++   
Sbjct: 628 IIALLESLDVPIGQLHFKKGTEYQLERDYTDHVLQLTAQVSLRDALKAGAEVVKQVESPL 687

Query: 168 SLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSP 227
               L     +LQA D   L        Q GG DQ    I   +   +LK  K + L +P
Sbjct: 688 LSGLLY---PLLQALDEQYLK----VDGQFGGVDQRKIFILAEEQLPKLKLGKRWHLMNP 740

Query: 228 LLTTASGTKMGKTL 241
           ++   +GTKM  + 
Sbjct: 741 MVPGLTGTKMSSSE 754


>gi|224824701|ref|ZP_03697808.1| tryptophanyl-tRNA synthetase [Lutiella nitroferrum 2002]
 gi|224603194|gb|EEG09370.1| tryptophanyl-tRNA synthetase [Lutiella nitroferrum 2002]
          Length = 340

 Score = 39.0 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 36/232 (15%), Positives = 67/232 (28%), Gaps = 52/232 (22%)

Query: 45  TASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMR-SQEIQENI 103
           T   LH GH    +    L +       L+    ++       D     ++    + +  
Sbjct: 19  TGP-LHLGHYVGSLRNRVLLQEHCTQFLLLADAQAL------TDNMGNYLKVRDNVLQVA 71

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFF----SVNRM----LS 155
                +          K+   +            +  L E+ S++    +V R+      
Sbjct: 72  LDYLAVG-----IDPAKSTIFI---------QSLVPELSELASYYLNLVTVARLERNPTI 117

Query: 156 FESVRSR-LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQ------------ 202
            + ++ R  +R+    FL   Y   QA D       +   +   G+DQ            
Sbjct: 118 KDEIKQRGFERDIPAGFL--TYPAAQAADITA----FKATIVPVGADQVPMIEQTNEIVR 171

Query: 203 WGNIICGIDL-GERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTS 253
             N   G +L  E            P +      KM K+L  A+ L+     
Sbjct: 172 RFNASVGQELLVETRAVVPEHGARLPGIDGK--AKMSKSLGNALALSASPDE 221


>gi|196233446|ref|ZP_03132289.1| pseudouridine synthase [Chthoniobacter flavus Ellin428]
 gi|196222442|gb|EDY16969.1| pseudouridine synthase [Chthoniobacter flavus Ellin428]
          Length = 237

 Score = 39.0 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 10/50 (20%), Positives = 20/50 (40%), Gaps = 1/50 (2%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLS 405
           +  AG   S       + S  ++IN  ++++   Q+   D    G+  L 
Sbjct: 7   LASAGL-GSRRGVEELITSGQVRINGQVVTDLSTQVGPTDAVKVGSRLLR 55


>gi|124267825|ref|YP_001021829.1| tryptophanyl-tRNA synthetase [Methylibium petroleiphilum PM1]
 gi|124260600|gb|ABM95594.1| tryptophanyl-tRNA synthetase [Methylibium petroleiphilum PM1]
          Length = 436

 Score = 39.0 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 23/94 (24%), Positives = 36/94 (38%), Gaps = 16/94 (17%)

Query: 166 EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-----TPK 220
           + ++S   ++Y IL A D + L   +   +   G DQ  +I    D+ +R         +
Sbjct: 126 DANISMGLYSYPILMAADIL-LFNAHRVPV---GRDQVQHIEMARDVAQRFNHLFGRGRE 181

Query: 221 LFALT-------SPLLTTASGTKMGKTLSGAIWL 247
           LF L           L    G KM K+    I L
Sbjct: 182 LFVLPRAEVEEDVATLPGLDGRKMSKSYDNTIPL 215


>gi|255012697|ref|ZP_05284823.1| tryptophanyl-tRNA synthetase [Bacteroides sp. 2_1_7]
          Length = 322

 Score = 38.6 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 31/185 (16%), Positives = 55/185 (29%), Gaps = 37/185 (20%)

Query: 154 LSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLG 213
           +  E        + S+S     Y  L A D + + K     +   G DQ  N+       
Sbjct: 99  VEKEIFNE--GNKHSVSAGLLTYPTLMAAD-IIIHKALKVPV---GKDQEQNMEMARRFA 152

Query: 214 ERLKTPKLFAL-----TSPL------LTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYW 261
            R  +           +  L      +    G+ KMGK+   AI+L  +  +     +  
Sbjct: 153 RRFNSTYGVDFFPEPASFHLGNKSVKVPGLDGSGKMGKSEGNAIYLIDDEKT---IKKKV 209

Query: 262 RN-IDDA--------DVVSFAKRLTTLPMSEIDRMAKLQGKEIN-------EAKKIIATE 305
              + DA             A   T + +           ++ N       + KK +A +
Sbjct: 210 MKAVSDAGPTEPNSVKPEPIANLFTMMEIVSEKETYDFFNEKYNNCEIRYGDMKKQLAED 269

Query: 306 ITTMV 310
           I    
Sbjct: 270 INKFC 274


>gi|218462484|ref|ZP_03502575.1| hemolysin A [Rhizobium etli Kim 5]
          Length = 261

 Score = 38.6 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 13/61 (21%), Positives = 25/61 (40%), Gaps = 10/61 (16%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIIS----------NEKLQIKLQDFDSTGNIK 403
            L+V  G   S + AR  L+   ++I   +++          +  +    QD+ S   +K
Sbjct: 24  QLLVSRGLFASRSRARDALQRGTVRIAGQVVTKAGALFGVNADIAIDDPAQDYVSRAALK 83

Query: 404 L 404
           L
Sbjct: 84  L 84


>gi|171690318|ref|XP_001910084.1| hypothetical protein [Podospora anserina S mat+]
 gi|170945107|emb|CAP71218.1| unnamed protein product [Podospora anserina S mat+]
          Length = 449

 Score = 38.6 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 10/59 (16%), Positives = 25/59 (42%), Gaps = 4/59 (6%)

Query: 338 TISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
            ++ +  E    + +   +    FA+S  +AR+ +   A+K+N   + +    +   D 
Sbjct: 128 QMTFAPQERRLDISVFRAL----FASSARQARQFVIHGAVKVNGKKMQHPGYLLNPGDL 182


>gi|167753109|ref|ZP_02425236.1| hypothetical protein ALIPUT_01380 [Alistipes putredinis DSM 17216]
 gi|167659423|gb|EDS03553.1| hypothetical protein ALIPUT_01380 [Alistipes putredinis DSM 17216]
          Length = 373

 Score = 38.6 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 36/240 (15%), Positives = 69/240 (28%), Gaps = 38/240 (15%)

Query: 44  LTASSLHAGHLTQLMLLFW---LQKTGH--KPISLMGGGTSIIGDPSFRDESRRMMRSQE 98
            T   LH GH      L     LQ +G   K   ++    ++  +    ++ R+ +    
Sbjct: 11  PTGK-LHLGHYVG--SLRRRVELQNSGEFEKIFIMIADAQALTDNADNPEKVRQNILEVA 67

Query: 99  IQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
           +      +    S+            +         +  + + R +    +V   +    
Sbjct: 68  LDYLSCGLDPAQSTLFIQSQVPELCELAFYY-----MNLVTVAR-LQRNPTVKAEIQLRG 121

Query: 159 VRSRLKRE----QSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
                + E    Q +    F Y I QA D           + +G  DQ   I    ++  
Sbjct: 122 FAEGNEEEGSQRQGIPVGFFTYPISQASDITAFKA---TTVPVG-EDQEPMIEQTREIVH 177

Query: 215 RLKTPKLFALTSPL-----------LTTASGT-KMGKTLSGAIWL----NKEMTSPYNFW 258
           +  +     L  P            L    G  KM K+L   I+L    ++        +
Sbjct: 178 KFNSVYGETLVMPGILLPDNAACLRLPGTDGKAKMSKSLGNCIYLSDSADEVKKKVMGMY 237


>gi|42409158|dbj|BAD10425.1| putative tyrosine-tRNA ligase [Oryza sativa Japonica Group]
 gi|50508147|dbj|BAD30722.1| putative tyrosine-tRNA ligase [Oryza sativa Japonica Group]
          Length = 329

 Score = 38.6 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 35/212 (16%), Positives = 70/212 (33%), Gaps = 25/212 (11%)

Query: 15  RGFIHQISNPRELDILCSQGVVTA-YIGYDLTASSLHA--GHLTQLMLLFWLQKTGHKPI 71
           RG   +     EL  L  +  V   Y G++ +   +H   G + + + +  + + G K  
Sbjct: 42  RGIGEECIQEDELMNLLQKKPVPICYDGFEPSGR-MHIAQG-IVKTINVNKMVRAGCKVK 99

Query: 72  SLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW 131
             +    + + +    D  +     + + E            +++     +     NE W
Sbjct: 100 IWIADWFAQLNNKMGGDLKKIQTVGRYMIEIWRAAGMNLD-GVEFLWSSEEINNRANEYW 158

Query: 132 LCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNY 191
                   L+ +I    +V R++    +  R      L+  +  Y  +Q  D   L  + 
Sbjct: 159 P-------LVMDIACKNNVKRIMRCCQIMGR-NDSDELTAAQIFYPCMQCADIFFLKADI 210

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFA 223
            C+L   G DQ             LK  + F 
Sbjct: 211 -CQL---GMDQ-------RKAQVNLKIKQAFC 231


>gi|332365086|gb|EGJ42851.1| tryptophan--tRNA ligase [Streptococcus sanguinis SK355]
          Length = 341

 Score = 38.6 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 41/232 (17%), Positives = 63/232 (27%), Gaps = 48/232 (20%)

Query: 44  LTASSLHAGHLTQ-LMLLFWLQKTGHKPISLM----GGGTSIIGDPSFRDESRRMMRSQE 98
            T   LH GH    L     LQ  G   + +        T    DP              
Sbjct: 12  PTGK-LHIGHYVGSLRNRVLLQDQGKYEMFVFLADQQALTDHAKDPQ------------- 57

Query: 99  IQENIEKIKGIFSSFIK--YGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSF 156
               +E I  +   ++       K    + +    L  +    +     +    N  +  
Sbjct: 58  --TIVESIGNVALDYLAAGLDPEKVTIFIQSQIPELAELSMYYMNLVSLARLERNPTVKT 115

Query: 157 ESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL 216
           E  +          FL   Y I QA D      N+   + +G  DQ   I    ++    
Sbjct: 116 EIAQKGFGESLPTGFL--VYPISQAADITAFKANF---VPVG-HDQKPMIEQTREIVRSF 169

Query: 217 KTPKLFALTSPL---------------LTTASGT-KMGKTLSGAIWLNKEMT 252
                   T  L               L    G  KM K+L+  I+L  +M 
Sbjct: 170 NHAYQ---TDVLVEPEGIYPENEAAGRLPGLDGNAKMSKSLNNGIYLADDMD 218


>gi|324989570|gb|EGC21516.1| tryptophan--tRNA ligase [Streptococcus sanguinis SK353]
 gi|325686468|gb|EGD28497.1| tryptophan--tRNA ligase [Streptococcus sanguinis SK72]
          Length = 341

 Score = 38.6 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 41/232 (17%), Positives = 63/232 (27%), Gaps = 48/232 (20%)

Query: 44  LTASSLHAGHLTQ-LMLLFWLQKTGHKPISLM----GGGTSIIGDPSFRDESRRMMRSQE 98
            T   LH GH    L     LQ  G   + +        T    DP              
Sbjct: 12  PTGK-LHIGHYVGSLRNRVLLQDQGKYEMFVFLADQQALTDHAKDPQ------------- 57

Query: 99  IQENIEKIKGIFSSFIK--YGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSF 156
               +E I  +   ++       K    + +    L  +    +     +    N  +  
Sbjct: 58  --TIVESIGNVALDYLAAGLDPEKVTIFIQSQIPELAELSMYYMNLVSLARLERNPTVKT 115

Query: 157 ESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL 216
           E  +          FL   Y I QA D      N+   + +G  DQ   I    ++    
Sbjct: 116 EIAQKGFGESLPTGFL--VYPISQAADITAFKANF---VPVG-HDQKPMIEQTREIVRSF 169

Query: 217 KTPKLFALTSPL---------------LTTASGT-KMGKTLSGAIWLNKEMT 252
                   T  L               L    G  KM K+L+  I+L  +M 
Sbjct: 170 NHAYQ---TDVLVEPEGIYPENEAAGRLPGLDGNAKMSKSLNNGIYLADDMD 218


>gi|13813608|gb|AAK40778.1| Tryptophanyl-tRNA synthetase (trpS) [Sulfolobus solfataricus P2]
 gi|261602061|gb|ACX91664.1| tryptophanyl-tRNA synthetase [Sulfolobus solfataricus 98/2]
          Length = 386

 Score = 38.6 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 45/262 (17%), Positives = 82/262 (31%), Gaps = 35/262 (13%)

Query: 9   LSILSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSL--HAGHLTQLMLLFWLQK 65
           L ++  R       +    L+          Y G    A SL  H GHL   +   WLQ+
Sbjct: 51  LHVMLRRNVFFSHRDLDLVLNDYEKSKGFFLYTG---RAPSLGMHIGHLIPFIFTKWLQE 107

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
             +  + +      I  D  +       +   + +             I  G       +
Sbjct: 108 KFNANLYI-----EITDDEKYMRNPEFTL--DQTRSWA---YDNILDIIAVGFNPDKTFI 157

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
             +  ++ ++  I +         + + L+F  VR+    + S +     Y  LQ     
Sbjct: 158 FQDTEYIRNMYPITV--------KIAKKLTFSEVRATFGLDASSNIGLIFYPALQ--IAP 207

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGE---RLKTPKLFALTSPLLTTASGTKMGKTLS 242
            + +   C +  G  DQ        D+ E     K  ++ +   P LT   G KM  +  
Sbjct: 208 TMFEKKRCLIPAG-IDQDPYWRLQRDIAESLGYYKAAQIHSKFLPPLTGPEG-KMSSSNP 265

Query: 243 G-AIWLNKEMTSPYNFWQYWRN 263
             AI+L  +   P    +    
Sbjct: 266 ETAIYLVDD---PKTVERKIMK 284


>gi|326797290|ref|YP_004315110.1| pseudouridine synthase Rsu [Marinomonas mediterranea MMB-1]
 gi|326548054|gb|ADZ93274.1| pseudouridine synthase Rsu [Marinomonas mediterranea MMB-1]
          Length = 355

 Score = 38.6 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 8/38 (21%), Positives = 15/38 (39%), Gaps = 1/38 (2%)

Query: 346 VSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSI 383
               + +   I ++G   S  EA R +   ++ IN   
Sbjct: 3   FKTSIRINKYISESGLC-SRREADRFIDQGSVFINGKR 39


>gi|312796683|ref|YP_004029605.1| Tryptophanyl-tRNA synthetase [Burkholderia rhizoxinica HKI 454]
 gi|312168458|emb|CBW75461.1| Tryptophanyl-tRNA synthetase (EC 6.1.1.2) [Burkholderia rhizoxinica
           HKI 454]
          Length = 415

 Score = 38.6 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 46/249 (18%), Positives = 79/249 (31%), Gaps = 64/249 (25%)

Query: 133 CSIKYIDLLREIGSFFSVNRMLSFES--------VRSRLKREQSLSFLEFNYMILQAYDF 184
             + ++++ REI   F  N +   E            +L  ++S  + E      Q  D 
Sbjct: 167 DQVPHVEMTREIARRF--NYLYGREPGFEDKANEAARKLGGKRSKLYHELRNAYQQEGDE 224

Query: 185 VELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSP--LLT------TASGTK 236
             L +     LQ     Q  ++     L   L+  +   L  P  LLT         G K
Sbjct: 225 EALEQAR-ALLQES---QSLSLSDRERLFGYLEGSRKIILVEPQVLLTEASRMPGLDGQK 280

Query: 237 MGKTLSGAIWLNKEMTSPYNFWQYWRNID------------DAD---VVSFAKRLTTLPM 281
           M K+    I L ++     +  +  R +             D D   V    +  T  P 
Sbjct: 281 MSKSYGNTIGLREDKV---SIEKKVRTMPTDPARVRRSDPGDPDKCPVWQLHQVYTDQPT 337

Query: 282 SE--------------------IDRMAKLQGKEINEAKKII--ATEITTMV-HGREEAEK 318
            E                    ID + + Q   +  A+K +   + +  +V HG ++A K
Sbjct: 338 HEWVQRGCRSAGIGCLECKQPVIDGILREQQPMLERAQKYMDDPSLLRAIVAHGCDKARK 397

Query: 319 -AATAAMEC 326
            A     + 
Sbjct: 398 LAHETMRDV 406


>gi|254416092|ref|ZP_05029847.1| photosystem II S4 domain protein [Microcoleus chthonoplastes PCC
           7420]
 gi|196177025|gb|EDX72034.1| photosystem II S4 domain protein [Microcoleus chthonoplastes PCC
           7420]
          Length = 259

 Score = 38.6 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 17/71 (23%), Positives = 28/71 (39%), Gaps = 6/71 (8%)

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDST-GNIKLSFG---- 407
           L  I  AGF TS ++    + +  +++N   +S     +K  D  +  G  +L  G    
Sbjct: 186 LDAIASAGFGTSRSKMADLIGAGDVRVNWKEVSQASYSVKPGDLIAIRGKGRLQVGDVSI 245

Query: 408 -KKNHIICHLC 417
            KK      L 
Sbjct: 246 TKKERYRIQLT 256


>gi|317407078|gb|EFV87089.1| hypothetical protein HMPREF0005_05807 [Achromobacter xylosoxidans
           C54]
          Length = 74

 Score = 38.6 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 11/69 (15%), Positives = 28/69 (40%)

Query: 336 MPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           MP I  +  E S  + +  L+   G   S    +  +    + +   + S +  +I+   
Sbjct: 1   MPIIEFTLAEGSPFIEVNQLLKATGVCDSGGAGKMLVADGHVSVGGVVESRKTAKIRPGQ 60

Query: 396 FDSTGNIKL 404
             + G++++
Sbjct: 61  IVTCGDVRI 69


>gi|294789275|ref|ZP_06754513.1| tryptophan--tRNA ligase [Simonsiella muelleri ATCC 29453]
 gi|294482700|gb|EFG30389.1| tryptophan--tRNA ligase [Simonsiella muelleri ATCC 29453]
          Length = 336

 Score = 38.6 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 18/82 (21%), Positives = 31/82 (37%), Gaps = 14/82 (17%)

Query: 174 FNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK---TPKLFAL------ 224
           ++Y IL   D +    ++   + +G  DQ  ++    D+ +R        +F L      
Sbjct: 135 YSYPILMTADIIMFNAHH---VPVG-RDQIQHVEMARDIAQRFNHRFGKDIFRLPEVVID 190

Query: 225 -TSPLLTTASGTKMGKTLSGAI 245
               LL    G KM K+    I
Sbjct: 191 ENVELLVGLDGRKMSKSYGNTI 212


>gi|161777477|ref|NP_341988.2| tryptophanyl-tRNA synthetase [Sulfolobus solfataricus P2]
 gi|284173275|ref|ZP_06387244.1| tryptophanyl-tRNA synthetase [Sulfolobus solfataricus 98/2]
 gi|20178133|sp|Q97ZX0|SYW_SULSO RecName: Full=Tryptophanyl-tRNA synthetase; AltName:
           Full=Tryptophan--tRNA ligase; Short=TrpRS
          Length = 380

 Score = 38.6 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 45/262 (17%), Positives = 82/262 (31%), Gaps = 35/262 (13%)

Query: 9   LSILSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSL--HAGHLTQLMLLFWLQK 65
           L ++  R       +    L+          Y G    A SL  H GHL   +   WLQ+
Sbjct: 45  LHVMLRRNVFFSHRDLDLVLNDYEKSKGFFLYTG---RAPSLGMHIGHLIPFIFTKWLQE 101

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
             +  + +      I  D  +       +   + +             I  G       +
Sbjct: 102 KFNANLYI-----EITDDEKYMRNPEFTL--DQTRSWA---YDNILDIIAVGFNPDKTFI 151

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
             +  ++ ++  I +         + + L+F  VR+    + S +     Y  LQ     
Sbjct: 152 FQDTEYIRNMYPITV--------KIAKKLTFSEVRATFGLDASSNIGLIFYPALQ--IAP 201

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGE---RLKTPKLFALTSPLLTTASGTKMGKTLS 242
            + +   C +  G  DQ        D+ E     K  ++ +   P LT   G KM  +  
Sbjct: 202 TMFEKKRCLIPAG-IDQDPYWRLQRDIAESLGYYKAAQIHSKFLPPLTGPEG-KMSSSNP 259

Query: 243 G-AIWLNKEMTSPYNFWQYWRN 263
             AI+L  +   P    +    
Sbjct: 260 ETAIYLVDD---PKTVERKIMK 278


>gi|152974707|ref|YP_001374224.1| tryptophanyl-tRNA synthetase [Bacillus cereus subsp. cytotoxis NVH
           391-98]
 gi|152023459|gb|ABS21229.1| tryptophanyl-tRNA synthetase [Bacillus cytotoxicus NVH 391-98]
          Length = 329

 Score = 38.6 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 44/295 (14%), Positives = 90/295 (30%), Gaps = 46/295 (15%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   + + +  G+    M  F   +  H     +    + I  P    + R+ +RS    
Sbjct: 7   GIQPSGT-ITLGNYLGAMKQFTELQNEHDCYFCIVNQHA-ITVPQDPVQLRKNIRSLAAL 64

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
                I    ++          A +     W        +++ I S   + RM      +
Sbjct: 65  YIACGIDPEKATLFVQSEVPAHAQL----GW--------IMQSIASVGELERMTQ---YK 109

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            +    +S+      Y  L A D +     Y+  +   G DQ  ++    DL ER     
Sbjct: 110 DKAAGRESVPTALLTYPPLMAADILL----YNTEIVPVGDDQKQHMELTRDLAERFNKRY 165

Query: 221 LFALTSPLLTTAS-G----------TKMGKTLSGAIWLNKEMTSPYNFWQYWRN-IDDAD 268
               T P +     G           KM K+      +   +  P    +  ++ + D+D
Sbjct: 166 REVFTIPEIRIPKVGARIMSLTEPTKKMSKSDPNPKAMICMLDEPKTIEKKIKSAVTDSD 225

Query: 269 ------------VVSFAKRLTTLPMSEIDRMAKL-QGKEINEAKKIIATEITTMV 310
                       + +     ++     I+ +    +GK   + K  +A  +   +
Sbjct: 226 GIVKFDKENKPGISNLLTIYSSFSGKTIEELEAQYEGKGYGDFKGDLAQVVAEAI 280


>gi|260061922|ref|YP_003195002.1| 30S ribosomal protein S4 [Robiginitalea biformata HTCC2501]
 gi|88786055|gb|EAR17224.1| 30S ribosomal protein S4 [Robiginitalea biformata HTCC2501]
          Length = 201

 Score = 38.6 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 12/82 (14%), Positives = 27/82 (32%), Gaps = 3/82 (3%)

Query: 320 ATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKI 379
                  F  +  S+ +    + +   SR   ++    + G A S   AR+ +    I +
Sbjct: 66  ERQFRNLFAQANRSKGVTGEVLLQLCESRLDNVVY---RMGIAPSRRAARQLVSHRHITV 122

Query: 380 NNSIISNEKLQIKLQDFDSTGN 401
           N  +++     +   D      
Sbjct: 123 NGELVNIPSYSLSAGDVVGVRE 144


>gi|326334734|ref|ZP_08200941.1| ribosomal large subunit pseudouridine synthase B [Capnocytophaga
           sp. oral taxon 338 str. F0234]
 gi|325693184|gb|EGD35116.1| ribosomal large subunit pseudouridine synthase B [Capnocytophaga
           sp. oral taxon 338 str. F0234]
          Length = 294

 Score = 38.6 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 15/69 (21%), Positives = 32/69 (46%), Gaps = 1/69 (1%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
           S+G+ L   I  AG      EA R++ +  +++N   ++    +++  D        +S 
Sbjct: 57  SKGIRLNKYIANAGICA-RREADRYITAGNVEVNGKPMTELGYRVQPNDIVKFDGKNISA 115

Query: 407 GKKNHIICH 415
            KK +I+ +
Sbjct: 116 EKKEYILLN 124


>gi|254486754|ref|ZP_05099959.1| lysyl-tRNA synthetase [Roseobacter sp. GAI101]
 gi|214043623|gb|EEB84261.1| lysyl-tRNA synthetase [Roseobacter sp. GAI101]
          Length = 536

 Score = 38.6 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 15/84 (17%), Positives = 23/84 (27%), Gaps = 4/84 (4%)

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            DF           +M G D   N      +   L        T  L     G K+ K+ 
Sbjct: 246 PDFGARWAALGVDFEMYGKDHSTNTPIYDAICRILGGKAPEHFTYELFLDQDGHKISKSS 305

Query: 242 SGAI----WLNKEMTSPYNFWQYW 261
              +    WL        +++ Y 
Sbjct: 306 GNGLTIDEWLTYASAESLSYFMYL 329


>gi|299138173|ref|ZP_07031353.1| ribosomal protein S4 [Acidobacterium sp. MP5ACTX8]
 gi|298600103|gb|EFI56261.1| ribosomal protein S4 [Acidobacterium sp. MP5ACTX8]
          Length = 210

 Score = 38.6 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 13/62 (20%), Positives = 28/62 (45%), Gaps = 5/62 (8%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            +  + GFA S  +AR+ ++   +++N   ++    Q K+ D      I +  G K  ++
Sbjct: 104 NVCYRLGFALSRRQARQVVRHGHVQVNGRKVNIPSFQCKIGD-----EIAIREGSKKLVL 158

Query: 414 CH 415
             
Sbjct: 159 LE 160


>gi|326202112|ref|ZP_08191982.1| pseudouridine synthase [Clostridium papyrosolvens DSM 2782]
 gi|325987907|gb|EGD48733.1| pseudouridine synthase [Clostridium papyrosolvens DSM 2782]
          Length = 235

 Score = 38.6 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 19/46 (41%), Gaps = 1/46 (2%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           + L   +  AG   S  +A   +K   + +NN II N    +   D
Sbjct: 4   IRLQKYLAHAG-VASRRKAEEMIKQGRVAVNNVIIENMGATVTCND 48


>gi|302660531|ref|XP_003021944.1| hypothetical protein TRV_03930 [Trichophyton verrucosum HKI 0517]
 gi|291185865|gb|EFE41326.1| hypothetical protein TRV_03930 [Trichophyton verrucosum HKI 0517]
          Length = 509

 Score = 38.6 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 13/62 (20%), Positives = 28/62 (45%), Gaps = 2/62 (3%)

Query: 334 QHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL 393
           Q  P + ++   + R + +   I +A FA+ST +AR+ +    + +N   +      +  
Sbjct: 123 QDTPYMLMTFAPLERRLDVA--IFRAMFASSTRQARQFVIHGGVTVNGKKMQYPGYLLNP 180

Query: 394 QD 395
            D
Sbjct: 181 GD 182


>gi|289425824|ref|ZP_06427578.1| S4 domain protein [Propionibacterium acnes SK187]
 gi|289426790|ref|ZP_06428518.1| S4 domain protein [Propionibacterium acnes J165]
 gi|289153767|gb|EFD02474.1| S4 domain protein [Propionibacterium acnes SK187]
 gi|289160116|gb|EFD08292.1| S4 domain protein [Propionibacterium acnes J165]
 gi|332675009|gb|AEE71825.1| RNA-binding S4 domain-containing protein [Propionibacterium acnes
           266]
          Length = 76

 Score = 38.6 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 9/46 (19%), Positives = 19/46 (41%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           + L   +  A  A +  +AR  + S  + +N  + +    Q+   D
Sbjct: 7   IRLGQYLKFANLAETGGQARELIASGMVSVNGEVETRRGRQLHPGD 52


>gi|229086021|ref|ZP_04218242.1| hypothetical protein bcere0022_26210 [Bacillus cereus Rock3-44]
 gi|228697231|gb|EEL49995.1| hypothetical protein bcere0022_26210 [Bacillus cereus Rock3-44]
          Length = 332

 Score = 38.6 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 20/91 (21%), Positives = 32/91 (35%), Gaps = 13/91 (14%)

Query: 166 EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALT 225
           +  ++   + Y IL A D + L ++    +   G DQ  +I    D+            T
Sbjct: 126 DTGVNMGLYTYPILMAADIL-LFQSSHVPV---GKDQIQHIEIARDIATYFNHTFRETFT 181

Query: 226 SP---------LLTTASGTKMGKTLSGAIWL 247
            P         +L    G KM K+    I L
Sbjct: 182 LPEYVIQEEGAILPGLDGRKMSKSYGNVIPL 212


>gi|218885473|ref|YP_002434794.1| pseudouridine synthase [Desulfovibrio vulgaris str. 'Miyazaki F']
 gi|218756427|gb|ACL07326.1| pseudouridine synthase [Desulfovibrio vulgaris str. 'Miyazaki F']
          Length = 251

 Score = 38.6 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 6/41 (14%), Positives = 16/41 (39%), Gaps = 1/41 (2%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
             I  AG   S  +A   ++   +++N  ++     ++   
Sbjct: 10  KAIAGAGVC-SRRQADDLIQQGVVRVNGEVVDTPGARVVPG 49


>gi|219666517|ref|YP_002456952.1| 30S ribosomal protein S4 [Desulfitobacterium hafniense DCB-2]
 gi|254764585|sp|B8G1Z3|RS4_DESHD RecName: Full=30S ribosomal protein S4
 gi|219536777|gb|ACL18516.1| ribosomal protein S4 [Desulfitobacterium hafniense DCB-2]
          Length = 208

 Score = 38.6 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 11/48 (22%), Positives = 21/48 (43%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
            ++ + GFATS  EAR+ ++     IN   +      +++ D      
Sbjct: 103 NVVFQLGFATSRPEARQLVRHGHFTINGRRVDIPSFLVRVGDVVGVKE 150


>gi|269795560|ref|YP_003315015.1| hypothetical protein Sked_22660 [Sanguibacter keddieii DSM 10542]
 gi|269097745|gb|ACZ22181.1| uncharacterized conserved protein [Sanguibacter keddieii DSM 10542]
          Length = 72

 Score = 38.6 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 13/60 (21%), Positives = 23/60 (38%), Gaps = 4/60 (6%)

Query: 336 MPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           M  + IS D +  G      +  A  A S   AR  +    + +N  + +    Q++  D
Sbjct: 1   MDHVEISDDVIRLG----QFLKLANLADSGAHARELVADGEVSVNGEVDTRRGRQLQKGD 56


>gi|90418700|ref|ZP_01226611.1| lysyl-tRNA synthetase [Aurantimonas manganoxydans SI85-9A1]
 gi|90336780|gb|EAS50485.1| lysyl-tRNA synthetase [Aurantimonas manganoxydans SI85-9A1]
          Length = 554

 Score = 38.6 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 13/82 (15%), Positives = 25/82 (30%), Gaps = 4/82 (4%)

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           D+           +M G D   ++     +   L +         L    SG K+ K+  
Sbjct: 250 DWAMRWAALGVDYEMAGKDLIDSVTLSSKICRALGSAPPEGFNYELFLDQSGQKISKSKG 309

Query: 243 GAI----WLNKEMTSPYNFWQY 260
             +    WL+        F+ +
Sbjct: 310 NGLTIDEWLSYASPQSLAFYMF 331


>gi|89893244|ref|YP_516731.1| 30S ribosomal protein S4 [Desulfitobacterium hafniense Y51]
 gi|122483915|sp|Q250K5|RS4_DESHY RecName: Full=30S ribosomal protein S4
 gi|89332692|dbj|BAE82287.1| 30S ribosomal protein S4 [Desulfitobacterium hafniense Y51]
          Length = 208

 Score = 38.6 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 11/48 (22%), Positives = 21/48 (43%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
            ++ + GFATS  EAR+ ++     IN   +      +++ D      
Sbjct: 103 NVVFQLGFATSRPEARQLVRHGHFTINGRRVDIPSFLVRVGDVVGVKE 150


>gi|306826176|ref|ZP_07459511.1| tryptophan--tRNA ligase [Streptococcus sp. oral taxon 071 str.
           73H25AP]
 gi|304431652|gb|EFM34633.1| tryptophan--tRNA ligase [Streptococcus sp. oral taxon 071 str.
           73H25AP]
          Length = 342

 Score = 38.6 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 41/244 (16%), Positives = 71/244 (29%), Gaps = 42/244 (17%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKT--GHKPISLMGG---GTSIIGDPSFRDESRRMMRSQE 98
            T   LH GH    +    L +    ++    +      T    DP              
Sbjct: 12  PTGK-LHIGHYVGSLKNRVLLQEEDKYEMFVFLADQQALTDHAKDPQ------------T 58

Query: 99  IQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
           I E+I  +  +    +     K+   + +    L  +    +     +    N  +  E 
Sbjct: 59  IVESIGNV-ALDYLAVGLDPSKSTIFIQSQIPELAELSMYYMNLVSLARLERNPTVKTEI 117

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
            +          FL   Y I QA D      NY   + +G +DQ   I    ++      
Sbjct: 118 AQKGFGESIPTGFL--VYPIAQAADITAFKANY---VPVG-TDQKPMIEQTREIVRSFNN 171

Query: 219 P-KLFALTSP-----------LLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNI- 264
                 L  P            L    G  KM K+L+  I+L  +  +     +   ++ 
Sbjct: 172 AYNCDVLVEPEGIYPENERAGRLPGLDGNAKMSKSLNNGIYLADDADT---LRKKVMSMY 228

Query: 265 DDAD 268
            D D
Sbjct: 229 TDPD 232


>gi|304436639|ref|ZP_07396608.1| hemolysin A [Selenomonas sp. oral taxon 149 str. 67H29BP]
 gi|304370335|gb|EFM23991.1| hemolysin A [Selenomonas sp. oral taxon 149 str. 67H29BP]
          Length = 268

 Score = 38.6 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 27/63 (42%), Gaps = 10/63 (15%)

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIIS--------NEKLQIKLQDF--DSTGNIKL 404
           L+   G A S   A+R + +  + +N   +         +  L++  +D    S G +KL
Sbjct: 9   LLTVQGLAPSRERAKRLIMAGQVLVNEQRVDKAGATVPADAVLRVVGEDLPYVSRGGLKL 68

Query: 405 SFG 407
           + G
Sbjct: 69  AKG 71


>gi|298373492|ref|ZP_06983481.1| ribosomal large subunit pseudouridine synthase B [Bacteroidetes
           oral taxon 274 str. F0058]
 gi|298274544|gb|EFI16096.1| ribosomal large subunit pseudouridine synthase B [Bacteroidetes
           oral taxon 274 str. F0058]
          Length = 396

 Score = 38.6 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 14/70 (20%), Positives = 30/70 (42%), Gaps = 2/70 (2%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ-DFDSTGNIK 403
           ++S  M L   I  +    S  EA   +++  + +N  +++    +I    D     +  
Sbjct: 156 DMSLPMRLNKFIANSNIC-SRREADEFIQAGVVSVNGQVVTELGTKIVPATDKVHFHDQL 214

Query: 404 LSFGKKNHII 413
           +S  KK +I+
Sbjct: 215 VSMEKKIYIL 224


>gi|289435539|ref|YP_003465411.1| hypothetical protein lse_2178 [Listeria seeligeri serovar 1/2b str.
           SLCC3954]
 gi|289171783|emb|CBH28329.1| trpS [Listeria seeligeri serovar 1/2b str. SLCC3954]
 gi|313632287|gb|EFR99339.1| tryptophan--tRNA ligase [Listeria seeligeri FSL N1-067]
 gi|313636791|gb|EFS02434.1| tryptophan--tRNA ligase [Listeria seeligeri FSL S4-171]
          Length = 331

 Score = 38.6 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 35/222 (15%), Positives = 67/222 (30%), Gaps = 45/222 (20%)

Query: 143 EIGSFFSVNRMLSFES----------VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYD 192
           E+ +      +L               + +   +  +S     Y  L A D + L +   
Sbjct: 83  EVAAHAQAAWILQCNVYIGELERMTQFKDKSDGKAGVSAGLLTYPPLMAADIL-LYQTNL 141

Query: 193 CRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-----------TKMGKT- 240
             +   G DQ  +I    DL ER         T P +                 KM K+ 
Sbjct: 142 VPV---GEDQKQHIELTRDLAERFNKKHADIFTMPEVFIPKQGARVMSLQDPTKKMSKSD 198

Query: 241 --LSGAIWLNKEMTSPYNFWQYWRN-IDDAD------------VVSFAKRLTTLPMSEID 285
             L  AI+L   +  P    +  ++ + D+             + +     + +    I 
Sbjct: 199 ANLKNAIFL---LDPPATITKKIKSAVTDSSGIIEYNKEEKPGISNLLTIYSVITGETIA 255

Query: 286 RMAKL-QGKEINEAKKIIATEITTMVHGREEAEKAATAAMEC 326
            + +   GK   + K  +A  +   +   +E   A   + E 
Sbjct: 256 SIEEKYVGKGYGDFKTDLAGIVVAELSPIQERYHAYLESEEL 297


>gi|284992847|ref|YP_003411401.1| 30S ribosomal protein S4 [Geodermatophilus obscurus DSM 43160]
 gi|284066092|gb|ADB77030.1| ribosomal protein S4 [Geodermatophilus obscurus DSM 43160]
          Length = 208

 Score = 38.6 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 22/44 (50%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
            ++ +AGFA S + AR+ ++   I++N   +     ++   D  
Sbjct: 102 NVVYRAGFAESRDMARQLVRHGHIRVNGRKVDIPSYRVASNDII 145


>gi|226306743|ref|YP_002766703.1| pseudouridine synthase [Rhodococcus erythropolis PR4]
 gi|226185860|dbj|BAH33964.1| putative pseudouridine synthase [Rhodococcus erythropolis PR4]
          Length = 267

 Score = 38.6 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 8/49 (16%), Positives = 23/49 (46%), Gaps = 1/49 (2%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
             G+ L  ++ +AG   S   A   +    ++++  I+  + L++  ++
Sbjct: 24  GDGVRLQKVLAQAG-VASRRAAEELIDQGRVEVDGRIVVEQGLRVDPEN 71


>gi|172040040|ref|YP_001799754.1| 30S ribosomal protein S4 [Corynebacterium urealyticum DSM 7109]
 gi|226697828|sp|B1VEY1|RS4_CORU7 RecName: Full=30S ribosomal protein S4
 gi|171851344|emb|CAQ04320.1| 30S ribosomal protein S4 [Corynebacterium urealyticum DSM 7109]
          Length = 201

 Score = 38.6 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 19/45 (42%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
            +I +AG A +  +AR+ +      +N   I+    ++   D   
Sbjct: 95  NVIYRAGLARTRRQARQLVSHGHFTVNGKKINVPSFRVSQYDIID 139


>gi|228471718|ref|ZP_04056491.1| ribosomal large subunit pseudouridine synthase B [Capnocytophaga
           gingivalis ATCC 33624]
 gi|228276871|gb|EEK15566.1| ribosomal large subunit pseudouridine synthase B [Capnocytophaga
           gingivalis ATCC 33624]
          Length = 329

 Score = 38.6 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 15/74 (20%), Positives = 34/74 (45%), Gaps = 1/74 (1%)

Query: 342 SKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
           +  + S+G+ L   I  AG      EA R++ +  +++N   ++    +++  D      
Sbjct: 87  NATDQSKGIRLNKYIANAGICA-RREADRYIAAGNVEVNGKPMTELGYRVQPTDVVKFDG 145

Query: 402 IKLSFGKKNHIICH 415
             +S  KK +I+ +
Sbjct: 146 KNISAEKKEYILLN 159


>gi|254517934|ref|ZP_05129990.1| tryptophanyl-tRNA synthetase [Clostridium sp. 7_2_43FAA]
 gi|226911683|gb|EEH96884.1| tryptophanyl-tRNA synthetase [Clostridium sp. 7_2_43FAA]
          Length = 336

 Score = 38.6 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 25/136 (18%), Positives = 44/136 (32%), Gaps = 19/136 (13%)

Query: 150 VNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICG 209
           ++RM  ++    R           F Y +L A D +     Y+  L   G DQ  ++   
Sbjct: 109 LSRMTQYKDKSQRYGDSIGAGL--FTYPVLMAADILL----YNTDLVPVGQDQKQHLEIA 162

Query: 210 IDLGERLKTP--KLFALTSPLLTTASGT---------KMGKTLSGAIWLNKEMTSPYNFW 258
            D+  R        F +  P +               KM K+          M  P    
Sbjct: 163 RDIANRFNNTYSPTFKIPDPYIPKVGAKVMSLQEPTKKMSKSDDNPNAYILIMDPPEVIR 222

Query: 259 QYW-RNIDDAD-VVSF 272
           +   R + D+  V+++
Sbjct: 223 KKISRAVTDSLGVINY 238


>gi|171059203|ref|YP_001791552.1| RNA-binding S4 domain-containing protein [Leptothrix cholodnii
           SP-6]
 gi|170776648|gb|ACB34787.1| RNA-binding S4 domain protein [Leptothrix cholodnii SP-6]
          Length = 74

 Score = 38.6 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 8/33 (24%), Positives = 15/33 (45%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNS 382
           +GL  L+   G A S   A+  +    ++I+  
Sbjct: 13  IGLDALLKATGLADSGGAAKALIAQGLVQIDGQ 45


>gi|148273158|ref|YP_001222719.1| putative pseudouridine synthase [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
 gi|147831088|emb|CAN02033.1| putative pseudouridine synthase [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
          Length = 286

 Score = 38.6 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 9/51 (17%), Positives = 21/51 (41%), Gaps = 1/51 (1%)

Query: 344 DEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
           DE  +G+ L  ++  AG   S       + +  + +N  +++    +I   
Sbjct: 14  DEPVQGVRLQKVMAAAG-VASRRVCEDMIAAGRVTVNGEVVTEPGRRIDPD 63


>gi|72392513|ref|XP_847057.1| tryptophanyl-tRNA synthetase [Trypanosoma brucei TREU927]
 gi|62358995|gb|AAX79445.1| tryptophanyl-tRNA synthetase, putative [Trypanosoma brucei]
 gi|70803087|gb|AAZ12991.1| tryptophanyl-tRNA synthetase, putative [Trypanosoma brucei brucei
           strain 927/4 GUTat10.1]
          Length = 473

 Score = 38.6 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 19/111 (17%), Positives = 38/111 (34%), Gaps = 8/111 (7%)

Query: 27  LDILCSQGVVTAYI--GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDP 84
           +      G   AY+  G   +  ++H GH+   ML  +LQ     P+ +       I D 
Sbjct: 144 VQEALRSGTQGAYLYTGRGPSTRTMHLGHVIPFMLTRYLQDALGLPLVI------QITDD 197

Query: 85  SFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSI 135
                    +      + I+ +       I +G       +  N +++ S+
Sbjct: 198 EKFFFRDVPLHDNRCSDGIDIVTENIKDIIAFGFDPKRTFIFRNTSYMGSM 248


>gi|148543830|ref|YP_001271200.1| RNA-binding S4 domain-containing protein [Lactobacillus reuteri DSM
           20016]
 gi|184153231|ref|YP_001841572.1| hypothetical protein LAR_0576 [Lactobacillus reuteri JCM 1112]
 gi|227364734|ref|ZP_03848783.1| ribosomal protein S4e [Lactobacillus reuteri MM2-3]
 gi|325682639|ref|ZP_08162156.1| S4 domain protein [Lactobacillus reuteri MM4-1A]
 gi|148530864|gb|ABQ82863.1| RNA-binding S4 domain protein [Lactobacillus reuteri DSM 20016]
 gi|183224575|dbj|BAG25092.1| conserved hypothetical protein [Lactobacillus reuteri JCM 1112]
 gi|227070193|gb|EEI08567.1| ribosomal protein S4e [Lactobacillus reuteri MM2-3]
 gi|324978478|gb|EGC15428.1| S4 domain protein [Lactobacillus reuteri MM4-1A]
          Length = 261

 Score = 38.6 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 13/46 (28%), Positives = 24/46 (52%)

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
           L +++ AGF  S N A++ ++   +++N   I     QI + D  S
Sbjct: 186 LDVVIAAGFNYSRNRAKQLIEHGQVRLNWEEIDRPDYQIVVHDLIS 231


>gi|119716853|ref|YP_923818.1| cysteinyl-tRNA synthetase [Nocardioides sp. JS614]
 gi|310947208|sp|A1SJZ6|MSHC_NOCSJ RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|119537514|gb|ABL82131.1| cysteinyl-tRNA synthetase [Nocardioides sp. JS614]
          Length = 397

 Score = 38.6 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 20/106 (18%), Positives = 33/106 (31%), Gaps = 21/106 (19%)

Query: 194 RLQMGGSDQWG---NIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKE 250
            +Q GGSD       +  G        TP     +   +    G KM K+    ++++  
Sbjct: 222 DVQGGGSDLVFPHHEMCAGHAQVAVPGTPFAQVYSHGGMVGYDGEKMSKSRGNLVFVSAL 281

Query: 251 MTSPYN------------FWQYWRNIDD------ADVVSFAKRLTT 278
             S  +            F   W   DD       D+  + K L+ 
Sbjct: 282 RNSDVDPMAIRLALLRHHFRSDWEWTDDQLWVAVDDIARWRKALSL 327


>gi|225867942|ref|YP_002743890.1| ribosomal large subunit pseudouridine synthase B [Streptococcus
           equi subsp. zooepidemicus]
 gi|225871142|ref|YP_002747089.1| ribosomal large subunit pseudouridine synthase B [Streptococcus
           equi subsp. equi 4047]
 gi|225700546|emb|CAW95028.1| ribosomal large subunit pseudouridine synthase B [Streptococcus
           equi subsp. equi 4047]
 gi|225701218|emb|CAW98156.1| ribosomal large subunit pseudouridine synthase B [Streptococcus
           equi subsp. zooepidemicus]
          Length = 240

 Score = 38.6 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 19/41 (46%), Gaps = 1/41 (2%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
           I  AG A S  +A   +K   + +N  +I++    +K  D 
Sbjct: 7   IAHAGLA-SRRKAEELIKRGLVTLNGQVITDLATTVKSGDL 46


>gi|226326148|ref|ZP_03801666.1| hypothetical protein COPCOM_03967 [Coprococcus comes ATCC 27758]
 gi|225205690|gb|EEG88044.1| hypothetical protein COPCOM_03967 [Coprococcus comes ATCC 27758]
          Length = 81

 Score = 38.6 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 11/62 (17%), Positives = 20/62 (32%), Gaps = 19/62 (30%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
           + L   +  AG   S  EA+  +    +K+N  + +                     GKK
Sbjct: 23  IKLGQALKAAGLVGSGVEAKEVITEGLVKVNGEVDT-------------------RRGKK 63

Query: 410 NH 411
            +
Sbjct: 64  LY 65


>gi|90578406|ref|ZP_01234217.1| tryptophanyl-tRNA synthetase [Vibrio angustum S14]
 gi|90441492|gb|EAS66672.1| tryptophanyl-tRNA synthetase [Vibrio angustum S14]
          Length = 338

 Score = 38.6 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 33/220 (15%), Positives = 69/220 (31%), Gaps = 35/220 (15%)

Query: 45  TASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMR-SQEIQENI 103
           T   LH GH    +      +  ++   L+     +       D      + +  I   +
Sbjct: 18  TGP-LHLGHYVGSLQQRIQLQHQYQQTILVADMQGL------TDNGHNPQKVASNILNVV 70

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL 163
                +           T   + ++   L  +          +  S++R+    +V++ +
Sbjct: 71  ADYLAVG-----IDPNLTTICLQSSLPVLAELTMY-----YSNLVSISRLERNPTVKNEI 120

Query: 164 KR---EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK--- 217
           +     +S+      Y I QA D      N    L   G DQ   +    ++  ++    
Sbjct: 121 QSKAFGRSIPAGFLTYPISQAADITAFKAN----LIPVGDDQLPMLEQTNEIVRKINHIA 176

Query: 218 TPKLFALTSPLLTT------ASGT-KMGKTLSGAIWLNKE 250
             ++      LL+         G  KM K++  AI L  +
Sbjct: 177 GKEVLVECQALLSNVARLPSTDGKNKMSKSMGNAITLGAD 216


>gi|94985941|ref|YP_605305.1| 30S ribosomal protein S4 [Deinococcus geothermalis DSM 11300]
 gi|152060945|sp|Q1IX98|RS4_DEIGD RecName: Full=30S ribosomal protein S4
 gi|94556222|gb|ABF46136.1| ribosomal protein S4 [Deinococcus geothermalis DSM 11300]
          Length = 206

 Score = 38.6 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 12/79 (15%), Positives = 33/79 (41%), Gaps = 3/79 (3%)

Query: 320 ATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKI 379
                  F+    + ++P ++ +         L  ++ + GFA++  +AR+ +    I +
Sbjct: 69  EKQFRNLFEE---AANVPGVTGTVFLQLLERRLDNVVFRMGFASTRRQARQFVGHGHILV 125

Query: 380 NNSIISNEKLQIKLQDFDS 398
           N   +     ++++ D  S
Sbjct: 126 NGKRVDIPSYRVRIGDEIS 144


>gi|116492846|ref|YP_804581.1| ribosomal large subunit pseudouridine synthase B [Pediococcus
           pentosaceus ATCC 25745]
 gi|116102996|gb|ABJ68139.1| ribosomal large subunit pseudouridine synthase B [Pediococcus
           pentosaceus ATCC 25745]
          Length = 241

 Score = 38.6 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 9/68 (13%), Positives = 26/68 (38%), Gaps = 1/68 (1%)

Query: 348 RGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFG 407
               L  ++ +AG   S  ++ + +    +++N  +I     ++   D      + L   
Sbjct: 2   EEERLQKVMAEAG-VASRRKSEKLITEGHVRVNGKVIKQLGTKVTAHDKIEVDGVPLQRE 60

Query: 408 KKNHIICH 415
           K  + + +
Sbjct: 61  KMVYFLLN 68


>gi|325973258|ref|YP_004250322.1| 30S ribosomal protein S4 [Mycoplasma suis str. Illinois]
 gi|325989693|ref|YP_004249392.1| 30S ribosomal protein S4 [Mycoplasma suis KI3806]
 gi|323574778|emb|CBZ40438.1| 30S ribosomal protein S4 [Mycoplasma suis]
 gi|323651860|gb|ADX97942.1| 30S ribosomal protein S4 [Mycoplasma suis str. Illinois]
          Length = 202

 Score = 38.6 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 8/44 (18%), Positives = 17/44 (38%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
            L+ +AG A +   AR+ +    I++N   +      +      
Sbjct: 99  NLVFRAGMANTRRAARQLIVHGHIRLNGKKVDIPSYVVPPSSVI 142


>gi|257095016|ref|YP_003168657.1| 30S ribosomal protein S4 [Candidatus Accumulibacter phosphatis
           clade IIA str. UW-1]
 gi|257047540|gb|ACV36728.1| ribosomal protein S4 [Candidatus Accumulibacter phosphatis clade
           IIA str. UW-1]
          Length = 209

 Score = 38.6 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 10/36 (27%), Positives = 21/36 (58%)

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           GFA S +E+R+ ++ N + +N   ++    Q++  D
Sbjct: 109 GFAASRSESRQVVRHNGVLVNGRRVNIPSYQVRPGD 144


>gi|300021952|ref|YP_003754563.1| lysyl-tRNA synthetase [Hyphomicrobium denitrificans ATCC 51888]
 gi|299523773|gb|ADJ22242.1| lysyl-tRNA synthetase [Hyphomicrobium denitrificans ATCC 51888]
          Length = 550

 Score = 38.6 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 24/132 (18%), Positives = 42/132 (31%), Gaps = 15/132 (11%)

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            DF           +M G D   N      + E L           L    +G K+ K+ 
Sbjct: 246 PDFGMRWAALGVDFEMFGKDHQTNAPIYDRICEILGGVAPQHYVYELFLDENGEKISKSK 305

Query: 242 SGAIWLNK--EMTSPYN----FWQYWRN--------IDDADVVSFAKRLTTLPMSEIDRM 287
              I +++     SP +     +Q  R+        I  A V  + + L+  P  +  + 
Sbjct: 306 GNGITIDQWLTYASPESLALFMFQKPRSAKKLYFDVIPRA-VDEYLQFLSAYPKQDGKQQ 364

Query: 288 AKLQGKEINEAK 299
                  I+ A+
Sbjct: 365 LDNPVWHIHAAQ 376


>gi|226356866|ref|YP_002786606.1| 30S ribosomal protein S4 [Deinococcus deserti VCD115]
 gi|259495272|sp|C1CXD5|RS4_DEIDV RecName: Full=30S ribosomal protein S4
 gi|226318856|gb|ACO46852.1| putative 30S ribosomal protein S4 [Deinococcus deserti VCD115]
          Length = 206

 Score = 38.6 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 13/79 (16%), Positives = 32/79 (40%), Gaps = 3/79 (3%)

Query: 320 ATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKI 379
                  F+ +     +P ++ +         L  ++ + GFA++  +AR+ +    I +
Sbjct: 69  EKQFRNLFEEAAS---VPGVTGTVFLQLLERRLDNVVFRMGFASTRRQARQFVGHGHILV 125

Query: 380 NNSIISNEKLQIKLQDFDS 398
           N   +     ++K+ D  S
Sbjct: 126 NGKKVDIPSYRVKIGDEIS 144


>gi|156973557|ref|YP_001444464.1| pseudouridylate synthase [Vibrio harveyi ATCC BAA-1116]
 gi|156525151|gb|ABU70237.1| hypothetical protein VIBHAR_01258 [Vibrio harveyi ATCC BAA-1116]
          Length = 384

 Score = 38.6 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 11/45 (24%), Positives = 16/45 (35%), Gaps = 1/45 (2%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG 400
           I + GF  S  EA R ++   + IN          +   D    G
Sbjct: 13  ISETGFC-SRREADRLIEQGRVTINGQQPEMGTKVLPGDDVCVDG 56


>gi|126313569|ref|XP_001366880.1| PREDICTED: similar to Tryptophanyl tRNA synthetase 2
           (mitochondrial) [Monodelphis domestica]
          Length = 362

 Score = 38.6 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 25/100 (25%), Positives = 39/100 (39%), Gaps = 14/100 (14%)

Query: 174 FNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP--KLFALTSPLLTT 231
           F Y +LQA D + L K+    +   G DQ  ++    DL +R      + F + + LLTT
Sbjct: 161 FTYPVLQAADIL-LYKSTHVPV---GEDQVTHMELARDLAQRFNKKYGEFFPVPTSLLTT 216

Query: 232 ASGTK--------MGKTLSGAIWLNKEMTSPYNFWQYWRN 263
               K        M K+    +   +   SP      +R 
Sbjct: 217 MKRVKSLRDPSAKMSKSDPDKLATVRVTDSPEEIMMKFRK 256


>gi|331267334|ref|YP_004326964.1| tryptophanyl-tRNA synthetase [Streptococcus oralis Uo5]
 gi|326684006|emb|CBZ01624.1| tryptophanyl-tRNA synthetase [Streptococcus oralis Uo5]
          Length = 341

 Score = 38.6 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 41/244 (16%), Positives = 71/244 (29%), Gaps = 42/244 (17%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKT--GHKPISLMGG---GTSIIGDPSFRDESRRMMRSQE 98
            T   LH GH    +    L +    ++    +      T    DP              
Sbjct: 12  PTGK-LHIGHYVGSLKNRVLLQEEDKYEMFVFLADQQALTDHAKDPQ------------T 58

Query: 99  IQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
           I E+I  +  +    +     K+   + +    L  +    +     +    N  +  E 
Sbjct: 59  IVESIGNV-ALDYLAVGLDPSKSTIFIQSQIPELAELSMYYMNLVSLARLERNPTVKTEI 117

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
            +          FL   Y I QA D      NY   + +G +DQ   I    ++      
Sbjct: 118 AQKGFGESIPTGFL--VYPIAQAADITAFKANY---VPVG-TDQKPMIEQTREIVRSFNN 171

Query: 219 P-KLFALTSP-----------LLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNI- 264
                 L  P            L    G  KM K+L+  I+L  +  +     +   ++ 
Sbjct: 172 AYNCEVLVEPEGIYPENERAGRLPGLDGNAKMSKSLNNGIYLADDADT---LRKKVMSMY 228

Query: 265 DDAD 268
            D D
Sbjct: 229 TDPD 232


>gi|313890897|ref|ZP_07824521.1| pseudouridine synthase B, ribosomal large subunit [Streptococcus
           pseudoporcinus SPIN 20026]
 gi|313120795|gb|EFR43910.1| pseudouridine synthase B, ribosomal large subunit [Streptococcus
           pseudoporcinus SPIN 20026]
          Length = 240

 Score = 38.6 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 7/34 (20%), Positives = 15/34 (44%)

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
             S  +A   +K   + +N  +I++    +K  D
Sbjct: 12  VASRRKAEELIKQGLVTLNGQVITDLATLVKSSD 45


>gi|299144486|ref|ZP_07037565.1| ribosomal protein S4 [Peptoniphilus sp. oral taxon 386 str. F0131]
 gi|298517574|gb|EFI41314.1| ribosomal protein S4 [Peptoniphilus sp. oral taxon 386 str. F0131]
          Length = 198

 Score = 38.6 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 11/50 (22%), Positives = 21/50 (42%), Gaps = 4/50 (8%)

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
           GFA+S  +AR+ +    I +N   ++    +    D  +        G+K
Sbjct: 98  GFASSIRQARQMVTHGHITVNGKKVNIPSYRCSAGDVIALSA----RGRK 143


>gi|283458425|ref|YP_003363049.1| 16S rRNA uridine-516 pseudouridylate synthase [Rothia mucilaginosa
           DY-18]
 gi|283134464|dbj|BAI65229.1| 16S rRNA uridine-516 pseudouridylate synthase [Rothia mucilaginosa
           DY-18]
          Length = 378

 Score = 38.6 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 7/47 (14%), Positives = 19/47 (40%), Gaps = 1/47 (2%)

Query: 348 RGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
            G+ L  L+ +AG   S       +    + +N  +++   +++   
Sbjct: 138 DGVRLQKLLAQAG-VASRRVCEEMITEGRVTVNGEVVTELGVRVDPS 183


>gi|255326184|ref|ZP_05367270.1| ribosomal large subunit pseudouridine synthase B [Rothia
           mucilaginosa ATCC 25296]
 gi|255296638|gb|EET75969.1| ribosomal large subunit pseudouridine synthase B [Rothia
           mucilaginosa ATCC 25296]
          Length = 386

 Score = 38.6 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 7/47 (14%), Positives = 19/47 (40%), Gaps = 1/47 (2%)

Query: 348 RGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
            G+ L  L+ +AG   S       +    + +N  +++   +++   
Sbjct: 146 DGVRLQKLLAQAG-VASRRVCEEMITEGRVTVNGEVVTELGVRVDPS 191


>gi|227544869|ref|ZP_03974918.1| ribosomal protein S4e [Lactobacillus reuteri CF48-3A]
 gi|300909911|ref|ZP_07127371.1| S4 domain-containing protein YlmH [Lactobacillus reuteri SD2112]
 gi|227185143|gb|EEI65214.1| ribosomal protein S4e [Lactobacillus reuteri CF48-3A]
 gi|300892559|gb|EFK85919.1| S4 domain-containing protein YlmH [Lactobacillus reuteri SD2112]
          Length = 261

 Score = 38.6 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 13/46 (28%), Positives = 24/46 (52%)

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
           L +++ AGF  S N A++ ++   +++N   I     QI + D  S
Sbjct: 186 LDVVIAAGFNYSRNRAKQLIEHGQVRLNWEEIDRPDYQIVVHDLIS 231


>gi|317009937|gb|ADU80517.1| tryptophanyl-tRNA synthetase [Helicobacter pylori India7]
          Length = 326

 Score = 38.6 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 36/188 (19%), Positives = 62/188 (32%), Gaps = 39/188 (20%)

Query: 147 FFSVNRMLSFESVR-SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGN 205
             S+  M      +   LK  +S++   FNY IL A D +     Y   L   G DQ  +
Sbjct: 98  QVSMGEMQRMTQFKDKSLKNPKSVNVGLFNYPILMASDILL----YQSDLVPVGEDQKQH 153

Query: 206 IICGIDLGERLKT--PKLFALTSPLLTTASG---------TKMGKTLSG---AIWLNKEM 251
           +    ++ E+        F +  PL+               KM K+  G   AI+L   +
Sbjct: 154 LELTRNIAEKFNRDFGNCFKVPEPLIAKVGARVMGLDDPKVKMSKSHQGANHAIFL---L 210

Query: 252 TSPYNFWQYWRNIDDADV---------------VSFAKRLTTLPMSEIDRMAKLQGKEIN 296
             P    +  +      +               ++    L+      I+   K +G    
Sbjct: 211 DEPDIIVKKIKKAATDSMGVIAFDEKREGVFNLLNIYMLLSDESPENIEERFKNKG--YG 268

Query: 297 EAKKIIAT 304
           + KK +A 
Sbjct: 269 DFKKELAE 276


>gi|255948696|ref|XP_002565115.1| Pc22g11690 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211592132|emb|CAP98457.1| Pc22g11690 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 457

 Score = 38.6 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 12/60 (20%), Positives = 27/60 (45%), Gaps = 2/60 (3%)

Query: 337 PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
           P   ++   + R + +   I +A FA+S  +AR+ +   A+ +N   + +    +   D 
Sbjct: 112 PYTHMTFAPLERRLDVA--IFRALFASSARQARQFVIHGAVTVNGQKMKHPSYLLNPGDL 169


>gi|169629456|ref|YP_001703105.1| l RNA pseudouridine synthase [Mycobacterium abscessus ATCC 19977]
 gi|169241423|emb|CAM62451.1| Probablel RNA pseudouridine synthase [Mycobacterium abscessus]
          Length = 263

 Score = 38.6 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 10/48 (20%), Positives = 23/48 (47%), Gaps = 1/48 (2%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
             G+ L  ++ +AG A S   A R +    ++++  I++ +  +I   
Sbjct: 20  EEGIRLQKVLSQAGIA-SRRVAERMIYDGRVEVDGEIVTEQGRRIDPA 66


>gi|157692817|ref|YP_001487279.1| pseudouridylate synthase [Bacillus pumilus SAFR-032]
 gi|157681575|gb|ABV62719.1| pseudouridylate synthase [Bacillus pumilus SAFR-032]
          Length = 281

 Score = 38.6 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 11/55 (20%), Positives = 22/55 (40%), Gaps = 1/55 (1%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
           L  +I  AG   S  +A   +K   + +N   ++   +++   D      +KL  
Sbjct: 41  LQKVIAHAG-VASRRKAEELIKEGRVTVNGQTVTELGVKVGSSDKIEVNGLKLER 94


>gi|157869606|ref|XP_001683354.1| tryptophanyl-tRNA synthetase [Leishmania major strain Friedlin]
 gi|68126419|emb|CAJ04019.1| putative tryptophanyl-tRNA synthetase [Leishmania major strain
           Friedlin]
          Length = 412

 Score = 38.6 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 23/131 (17%), Positives = 43/131 (32%), Gaps = 17/131 (12%)

Query: 15  RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLM 74
           R     + +     +   +  V  Y G   +A ++H GH+   ML  +LQ     P+ + 
Sbjct: 79  RDLHKALVDIEA-SVKTGERSVFLYTGRGPSAGTMHLGHVLPFMLTKYLQDVFSLPLVI- 136

Query: 75  GGGTSIIGDPSFRDESRRMMRSQEIQENI---EKIKGIFSSFIKYGTGKTDALMLNNETW 131
                 I D        + +      E     E I+      I +        +  N  +
Sbjct: 137 -----QITD------DEKFLFRDVPFEGAKADELIRSNIKDIIAFNFNPRHTFIFRNTHY 185

Query: 132 LCSIKYIDLLR 142
           +  + Y  +LR
Sbjct: 186 MGDM-YPTVLR 195


>gi|327400270|ref|YP_004341109.1| 30S ribosomal protein S4 [Archaeoglobus veneficus SNP6]
 gi|327315778|gb|AEA46394.1| ribosomal protein S4 [Archaeoglobus veneficus SNP6]
          Length = 179

 Score = 38.6 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 19/120 (15%), Positives = 42/120 (35%), Gaps = 2/120 (1%)

Query: 278 TLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMP 337
                E+ R   +  K    A+ ++A        G     KA     +   M + S+   
Sbjct: 35  LRNKRELWRFQNILRKYRRVARDLLAKVDMPGREGEYAKAKAQMVIKKLIRMGVLSEGAT 94

Query: 338 TISISKDEVSRGM--GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
              I    V   +   L T++ + G A +  +AR+ +    I ++   ++     ++  +
Sbjct: 95  LDDILNLSVEDFLERRLQTMVYRQGLANTIKQARQLIVHGHIAVDGRRVTAPGYIVEKDE 154


>gi|315452888|ref|YP_004073158.1| leucyl-tRNA synthetase [Helicobacter felis ATCC 49179]
 gi|315131940|emb|CBY82568.1| leucyl-tRNA synthetase [Helicobacter felis ATCC 49179]
          Length = 804

 Score = 38.6 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 21/120 (17%), Positives = 33/120 (27%), Gaps = 15/120 (12%)

Query: 210 IDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADV 269
            DLG          LT+  +   +G KM K+    +       SP    + +     AD+
Sbjct: 546 RDLGYLKLNEPFTCLTTQGMVLKNGAKMSKSKGNVV-------SPQEIVEKY----GADI 594

Query: 270 VSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGR----EEAEKAATAAME 325
                     P  E+D   K         ++          H +    E    A   A  
Sbjct: 595 ARLYIHFVAPPNKELDWNDKALEGSARFIRRFYEKSFLAQPHTQRPTLENLNPAEKEARA 654


>gi|282854430|ref|ZP_06263767.1| S4 domain protein [Propionibacterium acnes J139]
 gi|282583883|gb|EFB89263.1| S4 domain protein [Propionibacterium acnes J139]
          Length = 76

 Score = 38.6 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 9/46 (19%), Positives = 19/46 (41%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           + L   +  A  A +  +AR  + S  + +N  + +    Q+   D
Sbjct: 7   IRLGQYLKFANLAETGGQARELIASGMVSVNGEVETRRGRQLHPGD 52


>gi|227821073|ref|YP_002825043.1| hemolysin-like protein [Sinorhizobium fredii NGR234]
 gi|227340072|gb|ACP24290.1| hemolysin-like protein [Sinorhizobium fredii NGR234]
          Length = 251

 Score = 38.6 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 8/52 (15%), Positives = 19/52 (36%), Gaps = 6/52 (11%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNE------KLQIKLQD 395
           + L  L++  G   S   AR  ++   + ++   ++           I + D
Sbjct: 9   IRLDQLLLNKGLVASRARARDAIQRGTVMVDGRTVTKPATAFAANATITIDD 60


>gi|145589030|ref|YP_001155627.1| tryptophanyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
 gi|145047436|gb|ABP34063.1| tryptophanyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
          Length = 400

 Score = 38.6 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 22/147 (14%), Positives = 49/147 (33%), Gaps = 21/147 (14%)

Query: 133 CSIKYIDLLREIGSFFSVNRMLSFES--------VRSRLKREQSLSFLEFNYMILQAYDF 184
             + ++++ RE+   F  N +   E            +L  +++  + E      +  D 
Sbjct: 152 DQVPHVEMTREVARRF--NYLYGREPGFEEKALEAVKKLGSKRAKMYSELRVAFQERGDD 209

Query: 185 VELAKNYDCRLQMGGS------DQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMG 238
             L +     LQ   S      ++    + G       + P+    T+  +    G KM 
Sbjct: 210 EALEQAK-ALLQEAQSLSMADRERLFGFLEGARKIILPE-PQALLTTASRMPGIDGQKMS 267

Query: 239 KTLSGAIWLNKEMTSPYNFWQYWRNID 265
           K+    I + +    P +  +  R + 
Sbjct: 268 KSYGNTIGIRE---QPEDVIKKIRTMP 291


>gi|52142190|ref|YP_084640.1| tryptophanyl-tRNA synthetase [Bacillus cereus E33L]
 gi|51975659|gb|AAU17209.1| possible tryptophan--tRNA ligase (tryptophanyl-tRNA synthetase)
           [Bacillus cereus E33L]
          Length = 332

 Score = 38.6 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 22/96 (22%), Positives = 33/96 (34%), Gaps = 17/96 (17%)

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLF 222
           L+ +  ++   + Y IL A D + L +     +   G DQ  +I    D+         F
Sbjct: 123 LEVDAGVNMGLYTYPILMAADIL-LFQATYVPV---GKDQIQHIEIARDIATYFN--HTF 176

Query: 223 ALTSPL-----------LTTASGTKMGKTLSGAIWL 247
             T  L           L    G KM K+    I L
Sbjct: 177 GRTFTLPEYVIQEEGAILPGLDGRKMSKSYGNVIPL 212


>gi|332523615|ref|ZP_08399867.1| pseudouridine synthase B, ribosomal large subunit [Streptococcus
           porcinus str. Jelinkova 176]
 gi|332314879|gb|EGJ27864.1| pseudouridine synthase B, ribosomal large subunit [Streptococcus
           porcinus str. Jelinkova 176]
          Length = 240

 Score = 38.6 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 7/34 (20%), Positives = 15/34 (44%)

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
             S  +A   +K   + +N  +I++    +K  D
Sbjct: 12  VASRRKAEELIKQGLVTLNGQVITDLATIVKSGD 45


>gi|225389033|ref|ZP_03758757.1| hypothetical protein CLOSTASPAR_02778 [Clostridium asparagiforme
           DSM 15981]
 gi|225044908|gb|EEG55154.1| hypothetical protein CLOSTASPAR_02778 [Clostridium asparagiforme
           DSM 15981]
          Length = 366

 Score = 38.6 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 40/235 (17%), Positives = 71/235 (30%), Gaps = 38/235 (16%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     LQ +G    I +M      + D +   E  R    +   +
Sbjct: 14  PTGR-LHVGHYVGSLKRRVELQNSGEFDEIYIMIADAQALTDNADNPEKVRQNIIEVALD 72

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
            +                K+   + +    LC + +  +     S    N  +  E    
Sbjct: 73  YLACG---------LDPEKSVLFIQSQIPELCEMTFYYMDLVTVSRLQRNPTVKSEIQMR 123

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKL 221
             +    + F  F Y I QA D           + +G  DQ   I    ++  +  +  +
Sbjct: 124 NFEASIPVGF--FTYPISQAADITAFKA---TTVPVG-EDQAPMIEQTREIVHKFNS--V 175

Query: 222 FALT----SPLLTTA---------SGT-KMGKTLSGAIWL----NKEMTSPYNFW 258
           +  T      LL             G  KM K+L   I+L    ++      + +
Sbjct: 176 YGETLVEPDILLPDNKACLRLPGIDGKAKMSKSLGNCIYLSDTEDEVKKKIMSMF 230


>gi|312137407|ref|YP_004004744.1| tryptophanyl-tRNA synthetase [Methanothermus fervidus DSM 2088]
 gi|311225126|gb|ADP77982.1| tryptophanyl-tRNA synthetase [Methanothermus fervidus DSM 2088]
          Length = 366

 Score = 38.6 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 61/345 (17%), Positives = 108/345 (31%), Gaps = 50/345 (14%)

Query: 12  LSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           L  RG I    +  + L  + ++       G   +   +H GH   +  L W +K G + 
Sbjct: 36  LMRRGVIFGQRDYNKILKAMKNKEDFAIVTGMMPSGK-MHIGHKMIIDQLIWYEKKGAEI 94

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
              +    +        +ES+++   + +   +     I    I       + ++ +   
Sbjct: 95  FIPIADMEAYSTRNKSFEESKKIAIEEYLANYLALGLDITKDSINVYLQSENLVVEDLAY 154

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE--LA 188
            L        LR I                     ++S S  +    I+QA D +   L 
Sbjct: 155 ILSKKVNFSELRAI------------------YGFDESTSIAQTYIPIIQAADILHPQLD 196

Query: 189 KNYD---CRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPL----LTTASGTKMGKTL 241
           +        + +G  DQ  +I    DL  R K    F L S      ++  +G KM  + 
Sbjct: 197 EFGGPKPVLVPVG-PDQDPHIRLSRDLASRFKKEYSFILPSSTYHKFMSGITGGKMSSSK 255

Query: 242 SG-AIWL-NKEMTSPYNFWQ--------------YWRNIDDADVVSFAKRLTTLPMSEID 285
              AI+L +          Q              Y  +  D  V               D
Sbjct: 256 PNDAIFLTDPPKVVENKIMQAKTGGRETLEDQRKYGGSPKDCVVYEILIYHVEDDKKVKD 315

Query: 286 RMAKLQGKEI--NEAKKIIATEITTMV--HGREEAEKAATAAMEC 326
              K +  EI   E KKI+A  +  ++   G++  +    AA   
Sbjct: 316 IYEKCKNGEIICGECKKIVAEHMKKLIIDIGKKREKMVEKAARVL 360


>gi|205372931|ref|ZP_03225739.1| tryptophanyl-tRNA synthetase [Bacillus coahuilensis m4-4]
          Length = 328

 Score = 38.6 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 45/299 (15%), Positives = 95/299 (31%), Gaps = 46/299 (15%)

Query: 37  TAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRS 96
           T + G   + + +  G+    ++ F   +  +     +    + I     R + R+ ++S
Sbjct: 3   TIFSGIQPSGT-ITLGNYIGAIMQFTELQHEYNCYFCVVDQHA-ITVQQDRLQLRKNIKS 60

Query: 97  QEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSF 156
                    I    S+          A       W+  ++ +  + E+       RM   
Sbjct: 61  LAALYLASGIDPDHSTIFIQSEVPAHAQ----AGWM--LQCVTYMGEL------ERMTQ- 107

Query: 157 ESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL 216
              + + + ++++S   F Y  L   D +     Y   +   G DQ  +I    D+ ER 
Sbjct: 108 --FKDKSEGKETVSSGLFTYPALMVGDILL----YKTDVVPVGDDQKQHIELTRDIAERF 161

Query: 217 KTPKLFALTSPLLTTASG-----------TKMGKTLSGAIWLNKEMTSPYNFWQYWRN-I 264
                   T P +  +              KM K+          +  P    +  ++ +
Sbjct: 162 NKKYNDIFTIPEIRISKNGARIMSLQDPLKKMSKSDENQKATITLLDDPKQIEKKIKSAV 221

Query: 265 DDAD------------VVSFAKRLTTLPMSEIDR-MAKLQGKEINEAKKIIATEITTMV 310
            D++            V +     + L    I+   AK +GK   E K  +A  +   +
Sbjct: 222 TDSEGIVRYDKDNKPGVSNLLNIYSILGKVSIEELEAKYEGKGYGEFKSDLAEVVVNAI 280


>gi|222147689|ref|YP_002548646.1| ribosomal large subunit pseudouridine synthase B [Agrobacterium
           vitis S4]
 gi|221734677|gb|ACM35640.1| ribosomal large subunit pseudouridine synthase B [Agrobacterium
           vitis S4]
          Length = 704

 Score = 38.6 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 11/61 (18%), Positives = 24/61 (39%), Gaps = 1/61 (1%)

Query: 337 PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
           P      ++  +   +  L+ +AG A S  +  R +    + +N  ++ +  L   L D 
Sbjct: 70  PAAKTGSEDTLKPERISKLLARAGIA-SRRDVERMIMEGRVAVNGKVLDSPVLNATLADR 128

Query: 397 D 397
            
Sbjct: 129 I 129


>gi|160883039|ref|ZP_02064042.1| hypothetical protein BACOVA_01002 [Bacteroides ovatus ATCC 8483]
 gi|237717425|ref|ZP_04547906.1| 30S ribosomal protein S4 [Bacteroides sp. D1]
 gi|237718717|ref|ZP_04549198.1| 30S ribosomal protein S4 [Bacteroides sp. 2_2_4]
 gi|260175442|ref|ZP_05761854.1| 30S ribosomal protein S4 [Bacteroides sp. D2]
 gi|262406190|ref|ZP_06082740.1| ribosomal protein S4 [Bacteroides sp. 2_1_22]
 gi|293372094|ref|ZP_06618485.1| ribosomal protein S4 [Bacteroides ovatus SD CMC 3f]
 gi|294644083|ref|ZP_06721860.1| ribosomal protein S4 [Bacteroides ovatus SD CC 2a]
 gi|294806543|ref|ZP_06765382.1| ribosomal protein S4 [Bacteroides xylanisolvens SD CC 1b]
 gi|298483090|ref|ZP_07001271.1| ribosomal protein S4 [Bacteroides sp. D22]
 gi|299144598|ref|ZP_07037666.1| ribosomal protein S4 [Bacteroides sp. 3_1_23]
 gi|315923671|ref|ZP_07919911.1| 30S ribosomal protein S4 [Bacteroides sp. D2]
 gi|156111511|gb|EDO13256.1| hypothetical protein BACOVA_01002 [Bacteroides ovatus ATCC 8483]
 gi|229443408|gb|EEO49199.1| 30S ribosomal protein S4 [Bacteroides sp. D1]
 gi|229451849|gb|EEO57640.1| 30S ribosomal protein S4 [Bacteroides sp. 2_2_4]
 gi|262357065|gb|EEZ06155.1| ribosomal protein S4 [Bacteroides sp. 2_1_22]
 gi|292632886|gb|EFF51473.1| ribosomal protein S4 [Bacteroides ovatus SD CMC 3f]
 gi|292640607|gb|EFF58848.1| ribosomal protein S4 [Bacteroides ovatus SD CC 2a]
 gi|294446238|gb|EFG14866.1| ribosomal protein S4 [Bacteroides xylanisolvens SD CC 1b]
 gi|295085403|emb|CBK66926.1| SSU ribosomal protein S4P [Bacteroides xylanisolvens XB1A]
 gi|298270834|gb|EFI12414.1| ribosomal protein S4 [Bacteroides sp. D22]
 gi|298515089|gb|EFI38970.1| ribosomal protein S4 [Bacteroides sp. 3_1_23]
 gi|313697546|gb|EFS34381.1| 30S ribosomal protein S4 [Bacteroides sp. D2]
          Length = 201

 Score = 38.6 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 8/82 (9%), Positives = 28/82 (34%), Gaps = 3/82 (3%)

Query: 320 ATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKI 379
                  F+ +  ++ + T  +    +   +    ++ + G A +   AR+ +    I +
Sbjct: 65  EKQFRNLFEKAATAKGI-TGEVLLQLLEGRLD--NVVFRLGIAPTRAAARQLVSHKHITV 121

Query: 380 NNSIISNEKLQIKLQDFDSTGN 401
           +  +++     +K         
Sbjct: 122 DGEVVNIPSFAVKPGQLIGVRE 143


>gi|330827739|ref|YP_004390691.1| tryptophanyl-tRNA synthetase II [Aeromonas veronii B565]
 gi|328802875|gb|AEB48074.1| tryptophanyl-tRNA synthetase II [Aeromonas veronii B565]
          Length = 337

 Score = 38.6 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 33/230 (14%), Positives = 69/230 (30%), Gaps = 33/230 (14%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMR-SQEIQEN 102
            T   LH GH    +      +  ++   ++    ++       D      + +  + E 
Sbjct: 12  PTGK-LHIGHYVGSLRQRVEAQHHYRQFVMIADLQAL------TDNGHNPAKVTDNVLEV 64

Query: 103 IEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR 162
           +     +          KT   + +    L  +    L     +    N  +  E  +  
Sbjct: 65  MADYLAVG-----LDPAKTTFCLQSALPALAELTCYYLNLVSVARLERNPTVKAEIQQKG 119

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK---TP 219
            +R     FL   Y + QA D      ++   + +G  DQ   +    ++  R       
Sbjct: 120 FERTLPAGFL--VYPVSQAADITAFRASH---VPVG-EDQLPMLEQTNEIVRRFNSLVGK 173

Query: 220 KLFALTSPLL------TTASGT-KMGKTLSGAIWLN----KEMTSPYNFW 258
           ++     P+L          G  KM K+L   I L     +   + +  +
Sbjct: 174 EVLTECQPILSDTGRLPGIDGKAKMSKSLGNTIELGMPTEEVKQAVFAMY 223


>gi|303391337|ref|XP_003073898.1| tryptophanyl-tRNA synthetase [Encephalitozoon intestinalis ATCC
           50506]
 gi|303303047|gb|ADM12538.1| tryptophanyl-tRNA synthetase [Encephalitozoon intestinalis ATCC
           50506]
          Length = 385

 Score = 38.6 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 34/233 (14%), Positives = 76/233 (32%), Gaps = 28/233 (12%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSF 86
           LD +        Y G   ++ ++H GH+   +L  ++Q T  K   ++            
Sbjct: 72  LDEVSKNKSFYLYTGRGPSSKAMHIGHIIPFLLCKYIQDT-FKVHLVI----------QI 120

Query: 87  RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGS 146
            D+ + + ++ ++++ I   K      I  G       + +N             + +  
Sbjct: 121 TDDEKFLWKNMKLEDAISYGKENMKDIIALGFDPKLTYIFSNVE-----SSHHFEKNVLK 175

Query: 147 FFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAY-----DFVELAKNYDCRLQMGGSD 201
              +++ ++F  V        S +  +  +   +        F  + ++  C +     D
Sbjct: 176 ---ISKTINFNEVSKIFGFNTSSNIGQVGFPSKEIAPCFPSSFKFIEEDAMCLV-FAAVD 231

Query: 202 QWGNIICGIDLGERLKTPKLFALTSPLLTTASGT--KMGKTLSG-AIWLNKEM 251
           Q        D    L   K  +    LL    G   KM  +    +I+L+   
Sbjct: 232 QDPFFRLARDKANTLGERKPSSAYVSLLPDLKGVNRKMSASDPNSSIYLDDTP 284


>gi|194016715|ref|ZP_03055328.1| ribosomal large subunit pseudouridine synthase B [Bacillus pumilus
           ATCC 7061]
 gi|194011321|gb|EDW20890.1| ribosomal large subunit pseudouridine synthase B [Bacillus pumilus
           ATCC 7061]
          Length = 290

 Score = 38.6 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 11/55 (20%), Positives = 22/55 (40%), Gaps = 1/55 (1%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
           L  +I  AG   S  +A   +K   + +N   ++   +++   D      +KL  
Sbjct: 50  LQKVIAHAG-VASRRKAEELIKEGRVTVNGQTVTELGVKVGSSDKIEVNGLKLER 103


>gi|114770184|ref|ZP_01447722.1| lysyl-tRNA synthetase [alpha proteobacterium HTCC2255]
 gi|114549021|gb|EAU51904.1| lysyl-tRNA synthetase [alpha proteobacterium HTCC2255]
          Length = 549

 Score = 38.6 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 16/85 (18%), Positives = 25/85 (29%), Gaps = 6/85 (7%)

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            DF       +   +M G D   N      +   L  P        L    +G K+ K+ 
Sbjct: 236 PDFGARWSALNVDFEMYGKDHSTNTHIYDKICRILGAPAPSHFFYELFLDENGEKISKSK 295

Query: 242 SGAI----WLN--KEMTSPYNFWQY 260
              +    WL      +  Y  +Q 
Sbjct: 296 GNGVSIDQWLTYASSESLSYFMYQK 320


>gi|49473707|ref|YP_031749.1| lysyl-tRNA synthetase [Bartonella quintana str. Toulouse]
 gi|49239210|emb|CAF25529.1| Lysyl-tRNA synthetase [Bartonella quintana str. Toulouse]
          Length = 553

 Score = 38.6 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 12/83 (14%), Positives = 22/83 (26%), Gaps = 4/83 (4%)

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           D+           +M G D   +      + + L           L     G K+ K+  
Sbjct: 251 DWAMRWSALGVDYEMAGKDLIDSTNLSSKICKVLGGKPPEGFNYELFLDDKGQKISKSKG 310

Query: 243 GAI----WLNKEMTSPYNFWQYW 261
             +    WL    T     + + 
Sbjct: 311 NGLTIDEWLTYAPTESLGLYMFL 333


>gi|29348111|ref|NP_811614.1| 30S ribosomal protein S4 [Bacteroides thetaiotaomicron VPI-5482]
 gi|253569617|ref|ZP_04847027.1| 30S ribosomal protein S4 [Bacteroides sp. 1_1_6]
 gi|298386205|ref|ZP_06995762.1| ribosomal protein S4 [Bacteroides sp. 1_1_14]
 gi|41017839|sp|Q8A4A1|RS4_BACTN RecName: Full=30S ribosomal protein S4
 gi|29340014|gb|AAO77808.1| 30S ribosomal protein S4 [Bacteroides thetaiotaomicron VPI-5482]
 gi|251841636|gb|EES69717.1| 30S ribosomal protein S4 [Bacteroides sp. 1_1_6]
 gi|298261433|gb|EFI04300.1| ribosomal protein S4 [Bacteroides sp. 1_1_14]
          Length = 201

 Score = 38.6 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 8/82 (9%), Positives = 28/82 (34%), Gaps = 3/82 (3%)

Query: 320 ATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKI 379
                  F+ +  ++ + T  +    +   +    ++ + G A +   AR+ +    I +
Sbjct: 65  EKQFRNLFEKAATAKGI-TGEVLLQLLEGRLD--NVVFRLGIAPTRAAARQLVSHKHITV 121

Query: 380 NNSIISNEKLQIKLQDFDSTGN 401
           +  +++     +K         
Sbjct: 122 DGEVVNIPSFAVKPGQLIGVRE 143


>gi|325288604|ref|YP_004264785.1| SSU ribosomal protein S4P [Syntrophobotulus glycolicus DSM 8271]
 gi|324964005|gb|ADY54784.1| SSU ribosomal protein S4P [Syntrophobotulus glycolicus DSM 8271]
          Length = 209

 Score = 38.6 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 19/39 (48%)

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
           GFA+S  EAR+ +    I +N   +      IK+ +  +
Sbjct: 109 GFASSRAEARQFVTHGHITVNGKRVDIASYLIKVGEVIA 147


>gi|312127649|ref|YP_003992523.1| hemolysin a [Caldicellulosiruptor hydrothermalis 108]
 gi|311777668|gb|ADQ07154.1| hemolysin A [Caldicellulosiruptor hydrothermalis 108]
          Length = 269

 Score = 38.6 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 18/39 (46%)

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL 393
           L+V+ G A S  +A+  + S  + +NN  I      I  
Sbjct: 8   LLVEKGLAESREKAKALILSGNVYVNNQKIEKAGEMIDE 46


>gi|319409851|emb|CBY90163.1| Uncharacterized protein ybcJ [Neisseria meningitidis WUE 2594]
          Length = 104

 Score = 38.6 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 10/53 (18%), Positives = 22/53 (41%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
           E +  + L  L+  AG A S  +A+  +    +  N    + +  +I+  +  
Sbjct: 35  EDNEYIALCDLLKLAGLAESGGQAKAFIAEGLVLRNGETETRKTAKIRGGEVI 87


>gi|311067631|ref|YP_003972554.1| tryptophanyl-tRNA synthetase [Bacillus atrophaeus 1942]
 gi|310868148|gb|ADP31623.1| tryptophanyl-tRNA synthetase [Bacillus atrophaeus 1942]
          Length = 330

 Score = 38.6 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 50/300 (16%), Positives = 96/300 (32%), Gaps = 50/300 (16%)

Query: 35  VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMM 94
             T + G   +  S+  G+    M  F   +  +     +    + I  P  R E R+  
Sbjct: 2   KKTIFSGIQPSG-SVTLGNYIGAMKQFVDLQHDYNGYFCIVDQHA-ITVPQDRLELRK-- 57

Query: 95  RSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRML 154
                      I+ + + ++  G     A +          +   +L+ +     + RM 
Sbjct: 58  ----------NIRNLAALYLAVGLDPEKATLFIQSEVPAHAQAGWMLQCVAYIGELERMT 107

Query: 155 SFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
                + + K ++++      Y  L A D +     Y   L   G DQ  ++    +L E
Sbjct: 108 Q---FKDKSKGKEAVVSGLLTYPPLMAGDILL----YGTDLVPVGEDQKQHLELTRNLAE 160

Query: 215 RLKTPKLFALTSPLLTTASG-----------TKMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
           R         T P +                 KM K+          +  P    +  ++
Sbjct: 161 RFNKKYNDIFTIPEVKIPKVGARIMSLADPLKKMSKSDPNQKAFITLLDDPKQLEKKIKS 220

Query: 264 -IDDAD-VVSFAK--------RLTTLPM------SEIDRMAKLQGKEINEAKKIIATEIT 307
            + D++ +V F K         LT   +       E++  AK +GK   E K  +A  + 
Sbjct: 221 AVTDSEGIVRFDKENKPGVSNLLTIYSILGNTTVEELE--AKYEGKGYGEFKSDVAEVVV 278


>gi|270291839|ref|ZP_06198054.1| tryptophan--tRNA ligase [Streptococcus sp. M143]
 gi|270279367|gb|EFA25209.1| tryptophan--tRNA ligase [Streptococcus sp. M143]
          Length = 341

 Score = 38.6 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 41/244 (16%), Positives = 71/244 (29%), Gaps = 42/244 (17%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKT--GHKPISLMGG---GTSIIGDPSFRDESRRMMRSQE 98
            T   LH GH    +    L +    ++    +      T    DP              
Sbjct: 12  PTGK-LHIGHYVGSLKNRVLLQEEDKYEMFVFLADQQALTDHAKDPQ------------T 58

Query: 99  IQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
           I E+I  +  +    +     K+   + +    L  +    +     +    N  +  E 
Sbjct: 59  IVESIGNV-ALDYLAVGLDPSKSTIFIQSQIPELAELSMYYMNLVSLARLERNPTVKTEI 117

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
            +          FL   Y I QA D      NY   + +G +DQ   I    ++      
Sbjct: 118 AQKGFGESIPTGFL--VYPIAQAADITAFKANY---VPVG-TDQKPMIEQTREIVRSFNN 171

Query: 219 P-KLFALTSP-----------LLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNI- 264
                 L  P            L    G  KM K+L+  I+L  +  +     +   ++ 
Sbjct: 172 AYNCDVLVEPEGIYPENERAGRLPGLDGNAKMSKSLNNGIYLADDADT---LRKKVMSMY 228

Query: 265 DDAD 268
            D D
Sbjct: 229 TDPD 232


>gi|188584864|ref|YP_001916409.1| SSU ribosomal protein S4P [Natranaerobius thermophilus JW/NM-WN-LF]
 gi|226699094|sp|B2A4P9|RS4_NATTJ RecName: Full=30S ribosomal protein S4
 gi|179349551|gb|ACB83821.1| SSU ribosomal protein S4P [Natranaerobius thermophilus JW/NM-WN-LF]
          Length = 209

 Score = 38.6 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 11/36 (30%), Positives = 18/36 (50%)

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           GFA S  EAR+ +    I +N   ++    ++K  D
Sbjct: 109 GFAASRAEARQFVNHGHIMVNGKRVNVASYEVKPGD 144


>gi|310658781|ref|YP_003936502.1| rlub [Clostridium sticklandii DSM 519]
 gi|308825559|emb|CBH21597.1| RluB [Clostridium sticklandii]
          Length = 235

 Score = 38.6 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 12/57 (21%), Positives = 25/57 (43%), Gaps = 1/57 (1%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
           M +   I   G A S  +A   ++   ++IN+S++S+   ++   D        +S 
Sbjct: 1   MRINKFIASCGIA-SRRKAEEMIQEGRVRINDSVVSDLSTKVSEIDIVKIDGKIISK 56


>gi|307244571|ref|ZP_07526676.1| ribosomal protein S4 [Peptostreptococcus stomatis DSM 17678]
 gi|306492098|gb|EFM64146.1| ribosomal protein S4 [Peptostreptococcus stomatis DSM 17678]
          Length = 201

 Score = 38.6 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 10/48 (20%), Positives = 19/48 (39%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
            L+ + G A S  +AR+ +    I +N   +      + + D  S   
Sbjct: 93  NLVYRMGLANSIRQARQMVSHGNIHVNGRKVDIPSYIVSVGDEISLRE 140


>gi|153805982|ref|ZP_01958650.1| hypothetical protein BACCAC_00227 [Bacteroides caccae ATCC 43185]
 gi|149130659|gb|EDM21865.1| hypothetical protein BACCAC_00227 [Bacteroides caccae ATCC 43185]
          Length = 201

 Score = 38.6 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 8/82 (9%), Positives = 28/82 (34%), Gaps = 3/82 (3%)

Query: 320 ATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKI 379
                  F+ +  ++ + T  +    +   +    ++ + G A +   AR+ +    I +
Sbjct: 65  EKQFRNLFEKAATAKGI-TGEVLLQLLEGRLD--NVVFRLGIAPTRAAARQLVGHKHITV 121

Query: 380 NNSIISNEKLQIKLQDFDSTGN 401
           +  +++     +K         
Sbjct: 122 DGEVVNIPSYAVKPGQLIGVRE 143


>gi|46198486|ref|YP_004153.1| hemolysin [Thermus thermophilus HB27]
 gi|46196108|gb|AAS80526.1| hemolysin [Thermus thermophilus HB27]
          Length = 235

 Score = 38.6 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 5/39 (12%), Positives = 17/39 (43%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
           +V+ G   S  +A+R ++   +++   ++      +   
Sbjct: 7   LVERGLVESREKAKRLIQEGKVRVGGKVVQKPAHPVPEG 45


>gi|326675349|ref|XP_003200331.1| PREDICTED: tryptophanyl-tRNA synthetase, cytoplasmic-like [Danio
          rerio]
          Length = 270

 Score = 38.6 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 25/62 (40%), Gaps = 6/62 (9%)

Query: 12 LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPI 71
          L  R   HQI     LD    Q     Y G   ++ ++H GHL   +   WLQ     P+
Sbjct: 5  LLFRDM-HQI-----LDAFEQQKPFYLYTGRGPSSQAIHVGHLIPFIFTKWLQDVFDVPL 58

Query: 72 SL 73
           +
Sbjct: 59 VI 60


>gi|317178453|dbj|BAJ56241.1| tryptophanyl-tRNA synthetase [Helicobacter pylori F30]
          Length = 326

 Score = 38.6 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 36/188 (19%), Positives = 62/188 (32%), Gaps = 39/188 (20%)

Query: 147 FFSVNRMLSFESVR-SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGN 205
             S+  M      +   LK  +S++   FNY IL A D +     Y   L   G DQ  +
Sbjct: 98  QVSMGEMQRMTQFKDKSLKNPKSVNVGLFNYPILMASDILL----YQSDLVPVGEDQKQH 153

Query: 206 IICGIDLGERLKT--PKLFALTSPLLTTASG---------TKMGKTLSG---AIWLNKEM 251
           +    ++ E+        F +  PL+               KM K+  G   AI+L   +
Sbjct: 154 LELTRNIAEKFNRDFGNCFKVPEPLIAKVGARVMGLDDPKVKMSKSHKGANHAIFL---L 210

Query: 252 TSPYNFWQYWRNIDDADV---------------VSFAKRLTTLPMSEIDRMAKLQGKEIN 296
             P    +  +      +               ++    L+      I+   K +G    
Sbjct: 211 DEPDIIVRKIKKAATDSMGVIAFDEKREGVFNLLNIYMLLSNESPENIEERFKNKG--YG 268

Query: 297 EAKKIIAT 304
           + KK +A 
Sbjct: 269 DFKKELAE 276


>gi|170744328|ref|YP_001772983.1| lysyl-tRNA synthetase [Methylobacterium sp. 4-46]
 gi|168198602|gb|ACA20549.1| Lysine--tRNA ligase [Methylobacterium sp. 4-46]
          Length = 567

 Score = 38.6 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 11/86 (12%), Positives = 25/86 (29%), Gaps = 2/86 (2%)

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            D+           +M G D   ++     +   L           L     G K+ K+ 
Sbjct: 244 PDWAMRWVALGVDYEMAGKDLIDSVKLSSQIARVLGGEPPEGFNYELFLDEKGQKISKSK 303

Query: 242 SGAIWLNK--EMTSPYNFWQYWRNID 265
              + +++     +P +   +  N  
Sbjct: 304 GNGLTIDEWLAYGTPESLALFMYNKP 329


>gi|154486367|ref|ZP_02027774.1| hypothetical protein BIFADO_00179 [Bifidobacterium adolescentis
           L2-32]
 gi|154084230|gb|EDN83275.1| hypothetical protein BIFADO_00179 [Bifidobacterium adolescentis
           L2-32]
          Length = 366

 Score = 38.6 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 48/321 (14%), Positives = 98/321 (30%), Gaps = 59/321 (18%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN 102
            T   LH GH    +     +Q  G     ++                 +++  ++  E+
Sbjct: 50  PTGR-LHLGHYFGSIRERVAMQNRGVNSNIIIADY--------------QVITDRDTTEH 94

Query: 103 IEKIKGIFSSFIKY----GTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
           IE    + +  + Y           +  ++     +   +  L  +             +
Sbjct: 95  IE--DNVLNLVLDYMAAGIDPNKTMIFTHSAVPAENQLMLPFLSLVTEAELHRNP----T 148

Query: 159 VRSRLK-REQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK 217
           V+S ++    +L+ L   Y + QA D   L    +      G D   ++     +  R  
Sbjct: 149 VKSEMEASGHALTGLLLTYPVHQACD--ILFCKANVV--PIGKDNLPHVEITRTIARRFN 204

Query: 218 T-----------PKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDD 266
                       P      +P +    G KM K+   +I L           +   +  D
Sbjct: 205 ERYAKKNPVFPEPSAILSEAPEIPGLDGRKMSKSYGNSIMLGATAEETAKLIKK--SPTD 262

Query: 267 ADVVSFAKRLTTLPMSEIDRMAKLQGKEI--NEAKKIIATEITTMVHGREEAEKAATAAM 324
           ++     +R+T  P++     A L    +      K IA EI     G    +K    ++
Sbjct: 263 SE-----RRITFDPIARPQVSALLTTAGLVTGRDPKDIAEEIGD--SGAGALKKYVIESV 315

Query: 325 ECF------DMSIHSQHMPTI 339
             F        +  ++ M +I
Sbjct: 316 NEFLAPHRERRAELAKDMDSI 336


>gi|22299704|ref|NP_682951.1| hypothetical protein tlr2161 [Thermosynechococcus elongatus BP-1]
 gi|22295888|dbj|BAC09713.1| tlr2161 [Thermosynechococcus elongatus BP-1]
          Length = 243

 Score = 38.6 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 18/113 (15%), Positives = 41/113 (36%), Gaps = 8/113 (7%)

Query: 296 NEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTL 355
             A+ I+  E  + +    +  +     ++  D S  +   P    S   V   + L   
Sbjct: 115 RGAQVILIPEKVSTLQKELKQVRTVPVTVDLCDWSELAVAPPQRK-SLSTVEASLRL-DA 172

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGK 408
           +  AGF  S ++    +    +++N  ++   +  +K+ D  +        GK
Sbjct: 173 VASAGFGVSRSKMSEWISQGLVRVNWQVVQQPRYLLKVNDLIAI------RGK 219


>gi|326472324|gb|EGD96333.1| 30S ribosomal subunit S4 [Trichophyton tonsurans CBS 112818]
          Length = 483

 Score = 38.6 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 13/62 (20%), Positives = 28/62 (45%), Gaps = 2/62 (3%)

Query: 334 QHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL 393
           Q  P + ++   + R + +   I +A FA+ST +AR+ +    + +N   +      +  
Sbjct: 110 QDTPYMLMTFAPLERRLDVA--IFRAMFASSTRQARQFVIHGGVTVNGKKMQYPGYLLNP 167

Query: 394 QD 395
            D
Sbjct: 168 GD 169


>gi|315127932|ref|YP_004069935.1| 30S ribosomal protein S4 [Pseudoalteromonas sp. SM9913]
 gi|332533190|ref|ZP_08409057.1| 30S ribosomal protein S4 [Pseudoalteromonas haloplanktis ANT/505]
 gi|315016446|gb|ADT69784.1| 30S ribosomal protein S4 [Pseudoalteromonas sp. SM9913]
 gi|332037269|gb|EGI73724.1| 30S ribosomal protein S4 [Pseudoalteromonas haloplanktis ANT/505]
          Length = 206

 Score = 38.6 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 30/64 (46%), Gaps = 8/64 (12%)

Query: 340 SISKDEVSRGMGLLTLIVK--------AGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
             ++ + + G  LL L+ +         GFA++  EAR+ +   AI +N  +++     I
Sbjct: 78  EAARLKGNTGENLLQLLEQRLDNVVYRMGFASTRAEARQLVSHKAILVNGRVVNIPSYVI 137

Query: 392 KLQD 395
             +D
Sbjct: 138 TPED 141


>gi|283795041|ref|YP_003359457.1| ribosomal protein S4 [Synedra acus]
 gi|261279697|gb|ACX62005.1| ribosomal protein S4 [Synedra acus]
          Length = 246

 Score = 38.6 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 25/41 (60%)

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           L+ +A FA S   AR+ ++   + +NNS+I+   +++K  D
Sbjct: 136 LLYRAHFAPSIKYARQLIQQGHVNLNNSVITESSVRLKNND 176


>gi|317152459|ref|YP_004120507.1| valyl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2]
 gi|316942710|gb|ADU61761.1| valyl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2]
          Length = 888

 Score = 38.6 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 24/155 (15%), Positives = 46/155 (29%), Gaps = 33/155 (21%)

Query: 206 IICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNID 265
           ++ G+   ER+    ++     L+    G KM K+    I    +       +       
Sbjct: 498 MMMGLQFMERVPFHDVYI--HALVRDEKGKKMSKSTGNVI----DPLDMIEKYG------ 545

Query: 266 DADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAME 325
            AD +      T    + + R  KL  + I   K  +               K   AA  
Sbjct: 546 -ADALR----FTLTSFAAMGRDIKLSEQRIEGYKHFM--------------NKIWNAAR- 585

Query: 326 CFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
            F M      +P + + +        +L  + +  
Sbjct: 586 -FAMMNLPDEIPAVPLDQTSSLADTWILHRLEEVK 619


>gi|254818897|ref|ZP_05223898.1| ribosomal large subunit pseudouridine synthase B [Mycobacterium
           intracellulare ATCC 13950]
          Length = 247

 Score = 38.6 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 7/48 (14%), Positives = 23/48 (47%), Gaps = 1/48 (2%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
           + G+ L  ++ +AG A S   A + +    ++++  +++    ++   
Sbjct: 4   AEGIRLQKVLSQAGIA-SRRAAEKLIIEGRVEVDGQVVTELGTRVDPD 50


>gi|237748688|ref|ZP_04579168.1| tryptophanyl-tRNA synthetase [Oxalobacter formigenes OXCC13]
 gi|229380050|gb|EEO30141.1| tryptophanyl-tRNA synthetase [Oxalobacter formigenes OXCC13]
          Length = 402

 Score = 38.6 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 28/131 (21%), Positives = 47/131 (35%), Gaps = 14/131 (10%)

Query: 133 CSIKYIDLLREIGSFFSVNRMLSFE--------SVRSRLKREQSLSFLEFNYMILQAYDF 184
             + +++++RE+   F  N M   E            +L ++ +  FLE      +  + 
Sbjct: 152 DQLPHMEIMRELARRF--NYMYGREKGFDEKAQESAKKLGKQPAKVFLELRTEYQEKGNT 209

Query: 185 VELAKNYDCRLQMGG-SDQWGNIICGIDLGERLK--TPKLFALT-SPLLTTASGTKMGKT 240
             L K      Q G  S     ++ G  LG R +        LT +  L    G KM K+
Sbjct: 210 EALEKAQAMLDQAGSLSTADRELLYGYLLGSRKQILAEPQALLTEASRLPGLDGAKMSKS 269

Query: 241 LSGAIWLNKEM 251
               I L  + 
Sbjct: 270 YGNTIALRDDK 280


>gi|307330440|ref|ZP_07609584.1| tryptophanyl-tRNA synthetase [Streptomyces violaceusniger Tu 4113]
 gi|306883957|gb|EFN14999.1| tryptophanyl-tRNA synthetase [Streptomyces violaceusniger Tu 4113]
          Length = 339

 Score = 38.6 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 25/132 (18%), Positives = 46/132 (34%), Gaps = 17/132 (12%)

Query: 149 SVNRMLS-FESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNII 207
            + RM+   E V     R +S+      Y  L A D + +   ++  +   G DQ  ++ 
Sbjct: 109 QMRRMIQYKEKVAREQARGRSVRLSLLTYPALMAADIL-VYGTHEVPV---GEDQTQHVE 164

Query: 208 CGIDLGERLKTPKLFALTSP----------LLTTASGT-KMGKTLSGAIWLNKEMTSPYN 256
              DL +R         T P          ++     T KMGK+ +    +   +  P  
Sbjct: 165 LARDLAQRFNQRYGPVFTVPRATQPRVSARVMDLQDPTSKMGKSHAETAGIVYLLDEPDM 224

Query: 257 FWQYWRN-IDDA 267
             +     + D+
Sbjct: 225 VRKKIMRAVTDS 236


>gi|257413346|ref|ZP_04742734.2| ribosomal small subunit pseudouridine synthase A [Roseburia
           intestinalis L1-82]
 gi|257203834|gb|EEV02119.1| ribosomal small subunit pseudouridine synthase A [Roseburia
           intestinalis L1-82]
          Length = 239

 Score = 38.6 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 9/49 (18%), Positives = 26/49 (53%), Gaps = 1/49 (2%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
            R M L  L+ + G   S +E +++++S  + +N  ++   + ++  ++
Sbjct: 2   ERAMRLDKLLTELG-TGSRSEVKKYIRSGLVTVNGEVVKKPEQRVDEKN 49


>gi|223986195|ref|ZP_03636214.1| hypothetical protein HOLDEFILI_03524 [Holdemania filiformis DSM
           12042]
 gi|223961832|gb|EEF66325.1| hypothetical protein HOLDEFILI_03524 [Holdemania filiformis DSM
           12042]
          Length = 369

 Score = 38.6 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 38/240 (15%), Positives = 85/240 (35%), Gaps = 46/240 (19%)

Query: 138 IDLLREIGSFFS-VNRMLS-FESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRL 195
           +  +    S+   +NRM    + V      E +L+   + Y  L A D +    +Y   +
Sbjct: 128 LGFIMNCNSYQGELNRMTQYKDKVAK---GETNLTVGLYTYPCLMAADILIYDADY---V 181

Query: 196 QMGGSDQWGNIICGIDLGERLKT--PKLFALTSPLLTTASG---------TKMGKT---L 241
            +G  DQ  ++    D+  R      + F +  PL+               KM K+    
Sbjct: 182 PVG-EDQKQHVELTRDIANRFNNRYGETFRIPEPLVPKVGARIMSLSDPSKKMSKSDKGD 240

Query: 242 SGAIWLNKEMTSPYNFWQYWRN-IDDAD------------VVSFAKRLTTLPMSEIDRM- 287
            G I+L +++ S     +   + + D +            + +    +++L    I+ + 
Sbjct: 241 KGCIYLLEDLKSAR---KKIMSAVTDNEACVRFDPENQPGIANLLTIMSSLSGEAIETIV 297

Query: 288 AKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVS 347
            +  GK   E K  +A  +        E E+      E  + ++  + +   ++    ++
Sbjct: 298 ERFAGKGYGEFKSAVADVVCA------ELERIQARYNEIINSTLIEETLAEGAVKAQRLA 351


>gi|104532355|gb|ABF72914.1| tyrosyl-tRNA synthetase-like [Belgica antarctica]
          Length = 138

 Score = 38.6 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 27/108 (25%), Positives = 39/108 (36%), Gaps = 13/108 (12%)

Query: 174 FNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTAS 233
             Y  LQA D   L        Q GG DQ            +L   K   L +P++   +
Sbjct: 35  LLYPGLQALDEEYLK----VDAQFGGVDQRKIFTLAEKCMPQLGYAKRIHLMNPMVPGLT 90

Query: 234 GTKMGKTLSGAIWLNKEMTSPYNFWQYWR-------NIDDADVVSFAK 274
           G KM  +   +      + SP N  +  +       NI D  ++SF K
Sbjct: 91  GGKMSSSEEDS--KIDLLDSPANVKKKIKRAFCEPGNITDNGLLSFIK 136


>gi|148984532|ref|ZP_01817820.1| tryptophanyl-tRNA synthetase [Streptococcus pneumoniae SP3-BS71]
 gi|147923309|gb|EDK74423.1| tryptophanyl-tRNA synthetase [Streptococcus pneumoniae SP3-BS71]
 gi|301800961|emb|CBW33623.1| tryptophanyl-tRNA synthetase [Streptococcus pneumoniae OXC141]
          Length = 341

 Score = 38.6 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 41/244 (16%), Positives = 70/244 (28%), Gaps = 42/244 (17%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKT--GHKPISLMGG---GTSIIGDPSFRDESRRMMRSQE 98
            T   LH GH    +    L +    +     +      T    DP              
Sbjct: 12  PTGK-LHIGHYVGSLKNRVLLQEEDKYDMFVFLADQQALTDHAKDPQ------------T 58

Query: 99  IQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
           I E+I  +  +    +     K+   + +    L  +    +     +    N  +  E 
Sbjct: 59  IVESIGNV-ALDYLAVGLDPNKSTIFIQSQIPELAELSMYYMNLVSLARLERNPTVKTEI 117

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
            +          FL   Y I QA D      NY   + +G +DQ   I    ++      
Sbjct: 118 SQKGFGESIPTGFL--VYPIAQAADITAFKANY---VPVG-TDQKPMIEQTREIVRSFNN 171

Query: 219 P-KLFALTSP-----------LLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNI- 264
                 L  P            L    G  KM K+L+  I+L  +  +     +   ++ 
Sbjct: 172 AYNCDVLVEPEGIYPENERAGRLPGLDGNAKMSKSLNNGIYLADDADT---LRKKVMSMY 228

Query: 265 DDAD 268
            D D
Sbjct: 229 TDPD 232


>gi|116496052|ref|YP_807786.1| tryptophanyl-tRNA synthetase II [Lactobacillus casei ATCC 334]
 gi|191639533|ref|YP_001988699.1| tryptophanyl-tRNA synthetase II [Lactobacillus casei BL23]
 gi|227532965|ref|ZP_03963014.1| tryptophanyl-tRNA synthetase II [Lactobacillus paracasei subsp.
           paracasei ATCC 25302]
 gi|239630456|ref|ZP_04673487.1| tryptophanyl-tRNA synthetase [Lactobacillus paracasei subsp.
           paracasei 8700:2]
 gi|301067608|ref|YP_003789631.1| tryptophanyl-tRNA synthetase [Lactobacillus casei str. Zhang]
 gi|116106202|gb|ABJ71344.1| tryptophanyl-tRNA synthetase [Lactobacillus casei ATCC 334]
 gi|190713835|emb|CAQ67841.1| Tryptophanyl-tRNA synthetase [Lactobacillus casei BL23]
 gi|227189366|gb|EEI69433.1| tryptophanyl-tRNA synthetase II [Lactobacillus paracasei subsp.
           paracasei ATCC 25302]
 gi|239526739|gb|EEQ65740.1| tryptophanyl-tRNA synthetase [Lactobacillus paracasei subsp.
           paracasei 8700:2]
 gi|300440015|gb|ADK19781.1| Tryptophanyl-tRNA synthetase [Lactobacillus casei str. Zhang]
 gi|327383633|gb|AEA55109.1| Tryptophanyl-tRNA synthetase [Lactobacillus casei LC2W]
 gi|327386824|gb|AEA58298.1| Tryptophanyl-tRNA synthetase [Lactobacillus casei BD-II]
          Length = 338

 Score = 38.6 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 37/242 (15%), Positives = 80/242 (33%), Gaps = 48/242 (19%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     LQ +G ++P  ++    ++         +      ++I+ 
Sbjct: 12  PTGR-LHIGHYIGSLKNRVELQNSGEYEPFVMIADTQAL---------TDNANDPEKIRH 61

Query: 102 NIEKIKGIFSSFIKYG----TGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFE 157
           ++          + Y           +++ +          +L        +VNR+    
Sbjct: 62  SL------LEVALDYLAVGIDPDKTTILVQS----QIPALFELTAYYLDLVTVNRLERNP 111

Query: 158 SVRSRLKR---EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
           +V++ +K+     S+    F Y + QA D           + +G  DQ   +    ++  
Sbjct: 112 TVKAEIKQKAFGDSVPAGFFIYPVSQAADITAFKA---TTVPVG-DDQEPMLEQTREIVR 167

Query: 215 RLKT---------PKLFALTSPL--LTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWR 262
                        P+ +     L  L    G  KM K+L+  I+L  +  +     Q   
Sbjct: 168 TFNRTYHKDVLVEPEGYFPPKGLGRLPGIDGNAKMSKSLNNGIYLADDADT---VKQKIM 224

Query: 263 NI 264
           ++
Sbjct: 225 SM 226


>gi|304393474|ref|ZP_07375402.1| ribosomal RNA large subunit methyltransferase J [Ahrensia sp.
           R2A130]
 gi|303294481|gb|EFL88853.1| ribosomal RNA large subunit methyltransferase J [Ahrensia sp.
           R2A130]
          Length = 250

 Score = 38.6 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 17/41 (41%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
            L+V+ G A S + A   +K   + I  + I+     +   
Sbjct: 12  QLLVERGMAPSRSRAADMIKRGCVMIAGTPITKPGQSLAPD 52


>gi|227830641|ref|YP_002832421.1| tryptophanyl-tRNA synthetase [Sulfolobus islandicus L.S.2.15]
 gi|229579524|ref|YP_002837922.1| tryptophanyl-tRNA synthetase [Sulfolobus islandicus Y.G.57.14]
 gi|229581788|ref|YP_002840187.1| tryptophanyl-tRNA synthetase [Sulfolobus islandicus Y.N.15.51]
 gi|229585186|ref|YP_002843688.1| tryptophanyl-tRNA synthetase [Sulfolobus islandicus M.16.27]
 gi|238620145|ref|YP_002914971.1| tryptophanyl-tRNA synthetase [Sulfolobus islandicus M.16.4]
 gi|284998168|ref|YP_003419935.1| tryptophanyl-tRNA synthetase [Sulfolobus islandicus L.D.8.5]
 gi|227457089|gb|ACP35776.1| tryptophanyl-tRNA synthetase [Sulfolobus islandicus L.S.2.15]
 gi|228010238|gb|ACP46000.1| tryptophanyl-tRNA synthetase [Sulfolobus islandicus Y.G.57.14]
 gi|228012504|gb|ACP48265.1| tryptophanyl-tRNA synthetase [Sulfolobus islandicus Y.N.15.51]
 gi|228020236|gb|ACP55643.1| tryptophanyl-tRNA synthetase [Sulfolobus islandicus M.16.27]
 gi|238381215|gb|ACR42303.1| tryptophanyl-tRNA synthetase [Sulfolobus islandicus M.16.4]
 gi|284446063|gb|ADB87565.1| tryptophanyl-tRNA synthetase [Sulfolobus islandicus L.D.8.5]
 gi|323475006|gb|ADX85612.1| tryptophanyl-tRNA synthetase [Sulfolobus islandicus REY15A]
 gi|323477736|gb|ADX82974.1| tryptophanyl-tRNA synthetase [Sulfolobus islandicus HVE10/4]
          Length = 386

 Score = 38.6 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 41/224 (18%), Positives = 71/224 (31%), Gaps = 31/224 (13%)

Query: 46  ASSL--HAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
           A SL  H GHL   +   WLQ   +  + +      I  D  F           + +   
Sbjct: 86  APSLGMHIGHLIPFIFTKWLQDKFNVNLYI-----EITDDEKFMRN--PEYTLDQTRSWA 138

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL 163
                     I  G       +  +  ++ ++  I +         + + L+F  VR+  
Sbjct: 139 ---YDNILDIIAVGFNPDKTFIFQDTEYIRNMYPIAV--------KIAKKLTFSEVRATF 187

Query: 164 KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE---RLKTPK 220
             + S +     Y  LQ      + +   C +  G  DQ        D+ E     K  +
Sbjct: 188 GLDVSSNIGLIFYPALQ--IAPTMFEKKRCLIPAG-IDQDPYWRLQRDIAESLGYYKAAQ 244

Query: 221 LFALTSPLLTTASGTKMGKTLSG-AIWLNKEMTSPYNFWQYWRN 263
           + +   P LT   G KM  +    AI+L  +   P    +    
Sbjct: 245 IHSKFLPPLTGPEG-KMSSSNPETAIYLVDD---PKTVERKIMK 284


>gi|117927542|ref|YP_872093.1| SSU ribosomal protein S4P [Acidothermus cellulolyticus 11B]
 gi|152060925|sp|A0LRP7|RS4_ACIC1 RecName: Full=30S ribosomal protein S4
 gi|117648005|gb|ABK52107.1| SSU ribosomal protein S4P [Acidothermus cellulolyticus 11B]
          Length = 208

 Score = 38.6 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 9/44 (20%), Positives = 21/44 (47%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
            ++ +AGFA S ++AR+ ++     +N   +     ++   D  
Sbjct: 102 NVVYRAGFAASRDQARQLVRHGHFLVNGRRVDIPSYRVSENDVI 145


>gi|307128492|ref|YP_003880523.1| tryptophanyl-tRNA synthetase [Streptococcus pneumoniae 670-6B]
 gi|306485554|gb|ADM92423.1| tryptophanyl-tRNA synthetase [Streptococcus pneumoniae 670-6B]
 gi|332071309|gb|EGI81804.1| tryptophanyl-tRNA synthetase [Streptococcus pneumoniae GA17545]
          Length = 341

 Score = 38.6 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 41/244 (16%), Positives = 70/244 (28%), Gaps = 42/244 (17%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKT--GHKPISLMGG---GTSIIGDPSFRDESRRMMRSQE 98
            T   LH GH    +    L +    +     +      T    DP              
Sbjct: 12  PTGK-LHIGHYVGSLKNRVLLQEEDKYDMFVFLADQQALTDHAKDPQ------------T 58

Query: 99  IQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
           I E+I  +  +    +     K+   + +    L  +    +     +    N  +  E 
Sbjct: 59  IVESIGNV-ALDYLAVGLDPNKSTIFIQSQIPELAELSMYYMNLVSLARLERNPTVKTEI 117

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
            +          FL   Y I QA D      NY   + +G +DQ   I    ++      
Sbjct: 118 SQKGFGESIPTGFL--VYPIAQAADITAFKANY---VPVG-TDQKPMIEQTREIVRSFNN 171

Query: 219 P-KLFALTSP-----------LLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNI- 264
                 L  P            L    G  KM K+L+  I+L  +  +     +   ++ 
Sbjct: 172 AYNCDVLVEPEGIYPDNERAGRLPGLDGNAKMSKSLNNGIYLADDADT---LRKKVMSMY 228

Query: 265 DDAD 268
            D D
Sbjct: 229 TDPD 232


>gi|257869449|ref|ZP_05649102.1| tryptophanyl-tRNA synthetase [Enterococcus gallinarum EG2]
 gi|257803613|gb|EEV32435.1| tryptophanyl-tRNA synthetase [Enterococcus gallinarum EG2]
          Length = 335

 Score = 38.6 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 34/223 (15%), Positives = 63/223 (28%), Gaps = 30/223 (13%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKT-GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     +Q    ++   ++    ++       +       S+ I +
Sbjct: 10  PTGQ-LHLGHYVGSLKKRVEMQDDPNNQLYIMIADMQALTD-----NAKNPQKVSENILQ 63

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
                  I          ++   + +    L  +    L     +    N  +  E  + 
Sbjct: 64  VALDYLAIG-----LDPTRSTLFIQSQIPQLSELTMYYLNLVSVARVRRNPTVKAEIEQK 118

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKL 221
           +        F  F Y + QA D      N    L   G DQ   +    ++     +   
Sbjct: 119 KFGEGVPTGF--FIYPVSQAADITAFKAN----LVPVGEDQKPMLEQTQEIVHSFNSIYS 172

Query: 222 FALTSPL----------LTTASGT-KMGKTLSGAIWLNKEMTS 253
             L  P           L    G  KM K+L+  I+L     +
Sbjct: 173 DVLVEPKAVLPPKGMGRLPGIDGNGKMSKSLNNGIYLADNADN 215


>gi|251781834|ref|YP_002996136.1| ribosomal large subunit pseudouridine synthase B [Streptococcus
           dysgalactiae subsp. equisimilis GGS_124]
 gi|242390463|dbj|BAH80922.1| ribosomal large subunit pseudouridine synthase B [Streptococcus
           dysgalactiae subsp. equisimilis GGS_124]
 gi|323126647|gb|ADX23944.1| hypothetical protein SDE12394_02010 [Streptococcus dysgalactiae
           subsp. equisimilis ATCC 12394]
          Length = 240

 Score = 38.6 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 8/34 (23%), Positives = 15/34 (44%)

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
             S  +A   +K   + +N  II++    +K  D
Sbjct: 12  VASRRKAEELIKQGLVTLNGQIITDLATTVKSGD 45


>gi|196006033|ref|XP_002112883.1| hypothetical protein TRIADDRAFT_56472 [Trichoplax adhaerens]
 gi|190584924|gb|EDV24993.1| hypothetical protein TRIADDRAFT_56472 [Trichoplax adhaerens]
          Length = 450

 Score = 38.6 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 12/67 (17%), Positives = 20/67 (29%), Gaps = 2/67 (2%)

Query: 11 ILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           L  R    ++     L     +  ++ Y G   T    H G+   +  +    K G   
Sbjct: 14 QLITRNL-QEVIGEERLLKTLKEKDISLYWGTATTGRP-HVGYFVPISKIADFLKAGCHV 71

Query: 71 ISLMGGG 77
          I L    
Sbjct: 72 IILFADL 78


>gi|148993619|ref|ZP_01823090.1| tryptophanyl-tRNA synthetase II [Streptococcus pneumoniae SP9-BS68]
 gi|168489303|ref|ZP_02713502.1| tryptophanyl-tRNA synthetase [Streptococcus pneumoniae SP195]
 gi|147927840|gb|EDK78862.1| tryptophanyl-tRNA synthetase II [Streptococcus pneumoniae SP9-BS68]
 gi|183572281|gb|EDT92809.1| tryptophanyl-tRNA synthetase [Streptococcus pneumoniae SP195]
 gi|332071672|gb|EGI82165.1| tryptophanyl-tRNA synthetase [Streptococcus pneumoniae GA17570]
          Length = 341

 Score = 38.6 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 41/244 (16%), Positives = 70/244 (28%), Gaps = 42/244 (17%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKT--GHKPISLMGG---GTSIIGDPSFRDESRRMMRSQE 98
            T   LH GH    +    L +    +     +      T    DP              
Sbjct: 12  PTGK-LHIGHYVGSLKNRVLLQEEDKYDMFVFLADQQALTDHAKDPQ------------T 58

Query: 99  IQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
           I E+I  +  +    +     K+   + +    L  +    +     +    N  +  E 
Sbjct: 59  IVESIGNV-ALDYLAVGLDPNKSTIFIQSQIPELAELSMYYMNLVSLARLERNPTVKTEI 117

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
            +          FL   Y I QA D      NY   + +G +DQ   I    ++      
Sbjct: 118 SQKGFGESIPTGFL--VYPIAQAADITAFKANY---VPVG-TDQKPMIEQTREIVRSFNN 171

Query: 219 P-KLFALTSP-----------LLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNI- 264
                 L  P            L    G  KM K+L+  I+L  +  +     +   ++ 
Sbjct: 172 AYNCDVLVEPEGIYPENERAGRLPGLDGNAKMSKSLNNGIYLADDADT---LRKKVMSMY 228

Query: 265 DDAD 268
            D D
Sbjct: 229 TDPD 232


>gi|226305369|ref|YP_002765327.1| 30S ribosomal protein S4 [Rhodococcus erythropolis PR4]
 gi|229489412|ref|ZP_04383275.1| ribosomal protein S4 [Rhodococcus erythropolis SK121]
 gi|259495289|sp|C0ZW53|RS4_RHOE4 RecName: Full=30S ribosomal protein S4
 gi|226184484|dbj|BAH32588.1| 30S ribosomal protein S4 [Rhodococcus erythropolis PR4]
 gi|229323509|gb|EEN89267.1| ribosomal protein S4 [Rhodococcus erythropolis SK121]
          Length = 201

 Score = 38.6 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 10/52 (19%), Positives = 22/52 (42%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLS 405
            ++ +AG A +  +AR+ +    + +NN  +     ++   D        LS
Sbjct: 95  NVVYRAGLARTRRQARQLVTHGHLLVNNKKVDIPSYRVSQYDIIDVKEKSLS 146


>gi|111023124|ref|YP_706096.1| 30S ribosomal protein S4 [Rhodococcus jostii RHA1]
 gi|226365623|ref|YP_002783406.1| 30S ribosomal protein S4 [Rhodococcus opacus B4]
 gi|122955187|sp|Q0S3E8|RS4_RHOSR RecName: Full=30S ribosomal protein S4
 gi|254764607|sp|C1B040|RS4_RHOOB RecName: Full=30S ribosomal protein S4
 gi|110822654|gb|ABG97938.1| 30S ribosomal protein S4 [Rhodococcus jostii RHA1]
 gi|226244113|dbj|BAH54461.1| 30S ribosomal protein S4 [Rhodococcus opacus B4]
          Length = 201

 Score = 38.6 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 10/52 (19%), Positives = 22/52 (42%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLS 405
            ++ +AG A +  +AR+ +    + +NN  +     ++   D        LS
Sbjct: 95  NVVYRAGLARTRRQARQLVTHGHLLVNNKKVDIPSYRVSQYDIIDVKEKSLS 146


>gi|70921159|ref|XP_733954.1| hypothetical protein [Plasmodium chabaudi chabaudi]
 gi|56506229|emb|CAH83422.1| hypothetical protein PC300495.00.0 [Plasmodium chabaudi chabaudi]
          Length = 210

 Score = 38.6 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 4/53 (7%)

Query: 25 RELDILCS--QGVVTAYI--GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
          R+LD L +  +   + YI  G   ++ S+H GHL       +LQ   + P+ +
Sbjct: 46 RDLDFLLNYYEKNKSFYIYTGRGPSSLSMHLGHLIPFYFCKYLQDAFNVPLII 98


>gi|71399233|ref|XP_802734.1| tryptophanyl-tRNA synthetase [Trypanosoma cruzi strain CL Brener]
 gi|70864738|gb|EAN81288.1| tryptophanyl-tRNA synthetase, putative [Trypanosoma cruzi]
          Length = 525

 Score = 38.6 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 24/125 (19%), Positives = 44/125 (35%), Gaps = 19/125 (15%)

Query: 38  AYIGYDLTASSLHAGHLTQLMLLFWLQKT-GHKPISLMGGGTSIIGDPSFRDESRRMMRS 96
            Y G   +A S+H GH+   +L  +LQ   G   +  +        D         +   
Sbjct: 212 LYTGRGPSARSMHIGHVIPFLLTRYLQDALGLPLVIQITD------DEKHFFRDIPVSGE 265

Query: 97  QEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSF 156
           +     +E IK I +    +G       +  N  ++  +          +   V RML+ 
Sbjct: 266 RASGLVVENIKDIIA----FGFDPRKTFIFRNTVYMGDMYP--------TVVQVQRMLTL 313

Query: 157 ESVRS 161
            +VR+
Sbjct: 314 SAVRN 318


>gi|293375505|ref|ZP_06621784.1| pseudouridylate synthase [Turicibacter sanguinis PC909]
 gi|325844949|ref|ZP_08168314.1| pseudouridine synthase B, ribosomal large subunit [Turicibacter sp.
           HGF1]
 gi|292645905|gb|EFF63936.1| pseudouridylate synthase [Turicibacter sanguinis PC909]
 gi|325488999|gb|EGC91388.1| pseudouridine synthase B, ribosomal large subunit [Turicibacter sp.
           HGF1]
          Length = 255

 Score = 38.3 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 12/64 (18%), Positives = 29/64 (45%), Gaps = 1/64 (1%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           L  +I +AG A S  +A + +    + +N+ ++     ++  ++      + L   KK +
Sbjct: 4   LQKVIAQAGIA-SRRKAEQLILDGKVTVNDKVVRELGTKVTGKEKIEVEGVPLQREKKVY 62

Query: 412 IICH 415
            + H
Sbjct: 63  YVLH 66


>gi|298531061|ref|ZP_07018462.1| ribosomal protein S4 [Desulfonatronospira thiodismutans ASO3-1]
 gi|298509084|gb|EFI32989.1| ribosomal protein S4 [Desulfonatronospira thiodismutans ASO3-1]
          Length = 208

 Score = 38.3 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 20/39 (51%)

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
           GFA S ++AR+ ++     IN + ++   + +K  D   
Sbjct: 108 GFANSRSQARQLVRHGHFHINGTRVNVPSILLKEGDVIG 146


>gi|317129612|ref|YP_004095894.1| tryptophanyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522]
 gi|315474560|gb|ADU31163.1| tryptophanyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522]
          Length = 329

 Score = 38.3 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 47/303 (15%), Positives = 95/303 (31%), Gaps = 54/303 (17%)

Query: 37  TAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRS 96
           T + G   + + L  G+    M  F   +  +     +    + I  P  +   ++ +RS
Sbjct: 3   TIFSGIQPSGT-LTLGNYLGAMKHFVDLQHENNCYFCIVDQHA-ITVPQEKLTLKKNIRS 60

Query: 97  QEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSF 156
                    I    S+          A +     W+  ++ +  + E+       RM   
Sbjct: 61  LAALYLAVGIDHNKSTLFIQSEVPAHAQL----GWI--MQCVSYIGEL------ERMTQ- 107

Query: 157 ESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL 216
              + +   ++ +S     Y  L A D +     Y   +   G DQ  ++    DL ER 
Sbjct: 108 --FKDKSAGKEGVSSALLTYPPLMAADILL----YGTDIVPVGEDQKQHLELTRDLAERF 161

Query: 217 KTPKLFALTSPLLTTAS-G----------TKMGKTLSGA----IWLNKEMTSPYNFWQYW 261
                   T P +     G           KM K+          L++E T      +  
Sbjct: 162 NKKYNDIFTIPEVKIPKVGARIMSLTEPTKKMSKSNPNPKSFISMLDEEKT----IIKKI 217

Query: 262 RN-IDDAD------------VVSFAKRLTTLPMSEIDRMAKL-QGKEINEAKKIIATEIT 307
           ++ + D++            V +     +      ID +     GK   + K  +A  + 
Sbjct: 218 KSAVTDSENEVRFDKENKPGVANLLSIYSLCTGESIDSLENKYVGKGYGDFKSDVAEAVV 277

Query: 308 TMV 310
           +++
Sbjct: 278 SVI 280


>gi|56477738|ref|YP_159327.1| propable 16S pseudouridylate synthase [Aromatoleum aromaticum EbN1]
 gi|56313781|emb|CAI08426.1| propable 16S pseudouridylate synthase [Aromatoleum aromaticum EbN1]
          Length = 314

 Score = 38.3 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 9/56 (16%), Positives = 22/56 (39%), Gaps = 7/56 (12%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIIS------NEKLQIKLQ 394
           +   G+ L  ++ + G   S  EA   ++   + ++   +S      +   +I L 
Sbjct: 71  DAPEGVRLSKIMSERGLC-SRREADEIIERGWVFVDGQRVSELGIRIDPNAEITLA 125


>gi|108802859|ref|YP_642796.1| RNA-binding S4 [Rubrobacter xylanophilus DSM 9941]
 gi|108764102|gb|ABG02984.1| RNA-binding S4 [Rubrobacter xylanophilus DSM 9941]
          Length = 64

 Score = 38.3 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 10/55 (18%), Positives = 24/55 (43%)

Query: 346 VSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG 400
           V  G+ L   +  A    S  EA+  +++  +++N  + +    +++  D    G
Sbjct: 3   VPAGITLGQALKLARVVGSGGEAKLVIRAGEVRVNGEVETRRGRRLRAGDVVEVG 57


>gi|15902033|ref|NP_346637.1| tryptophanyl-tRNA synthetase II [Streptococcus pneumoniae TIGR4]
 gi|15904075|ref|NP_359625.1| tryptophanyl-tRNA synthetase II [Streptococcus pneumoniae R6]
 gi|111658640|ref|ZP_01409290.1| hypothetical protein SpneT_02000230 [Streptococcus pneumoniae
           TIGR4]
 gi|116516810|ref|YP_817439.1| tryptophanyl-tRNA synthetase II [Streptococcus pneumoniae D39]
 gi|148988873|ref|ZP_01820288.1| tryptophanyl-tRNA synthetase [Streptococcus pneumoniae SP6-BS73]
 gi|148997969|ref|ZP_01825482.1| tryptophanyl-tRNA synthetase II [Streptococcus pneumoniae
           SP11-BS70]
 gi|149003097|ref|ZP_01828006.1| tryptophanyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS69]
 gi|149012796|ref|ZP_01833741.1| tryptophanyl-tRNA synthetase II [Streptococcus pneumoniae
           SP19-BS75]
 gi|149020148|ref|ZP_01835122.1| tryptophanyl-tRNA synthetase [Streptococcus pneumoniae SP23-BS72]
 gi|168484317|ref|ZP_02709269.1| tryptophanyl-tRNA synthetase [Streptococcus pneumoniae CDC1873-00]
 gi|168487207|ref|ZP_02711715.1| tryptophanyl-tRNA synthetase [Streptococcus pneumoniae CDC1087-00]
 gi|168491761|ref|ZP_02715904.1| tryptophanyl-tRNA synthetase [Streptococcus pneumoniae CDC0288-04]
 gi|168494010|ref|ZP_02718153.1| tryptophanyl-tRNA synthetase [Streptococcus pneumoniae CDC3059-06]
 gi|168576101|ref|ZP_02722006.1| tryptophanyl-tRNA synthetase [Streptococcus pneumoniae MLV-016]
 gi|169833298|ref|YP_001695581.1| tryptophanyl-tRNA synthetase II [Streptococcus pneumoniae
           Hungary19A-6]
 gi|194396965|ref|YP_002038825.1| tryptophanyl-tRNA synthetase II [Streptococcus pneumoniae G54]
 gi|221232927|ref|YP_002512081.1| tryptophanyl-tRNA synthetase [Streptococcus pneumoniae ATCC 700669]
 gi|225855722|ref|YP_002737234.1| tryptophanyl-tRNA synthetase II [Streptococcus pneumoniae JJA]
 gi|225857797|ref|YP_002739308.1| tryptophanyl-tRNA synthetase II [Streptococcus pneumoniae P1031]
 gi|225860000|ref|YP_002741510.1| tryptophanyl-tRNA synthetase II [Streptococcus pneumoniae 70585]
 gi|225862045|ref|YP_002743554.1| tryptophanyl-tRNA synthetase II [Streptococcus pneumoniae
           Taiwan19F-14]
 gi|237651042|ref|ZP_04525294.1| tryptophanyl-tRNA synthetase II [Streptococcus pneumoniae CCRI
           1974]
 gi|237821155|ref|ZP_04597000.1| tryptophanyl-tRNA synthetase II [Streptococcus pneumoniae CCRI
           1974M2]
 gi|298229427|ref|ZP_06963108.1| tryptophanyl-tRNA synthetase II [Streptococcus pneumoniae str.
           Canada MDR_19F]
 gi|298255951|ref|ZP_06979537.1| tryptophanyl-tRNA synthetase II [Streptococcus pneumoniae str.
           Canada MDR_19A]
 gi|298501745|ref|YP_003723685.1| tryptophanyl-tRNA synthetase II [Streptococcus pneumoniae
           TCH8431/19A]
 gi|303254890|ref|ZP_07340975.1| tryptophanyl-tRNA synthetase II [Streptococcus pneumoniae BS455]
 gi|303259717|ref|ZP_07345693.1| tryptophanyl-tRNA synthetase [Streptococcus pneumoniae SP-BS293]
 gi|303262184|ref|ZP_07348129.1| tryptophanyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS292]
 gi|303264619|ref|ZP_07350538.1| tryptophanyl-tRNA synthetase [Streptococcus pneumoniae BS397]
 gi|303266072|ref|ZP_07351966.1| tryptophanyl-tRNA synthetase [Streptococcus pneumoniae BS457]
 gi|303268480|ref|ZP_07354274.1| tryptophanyl-tRNA synthetase [Streptococcus pneumoniae BS458]
 gi|307068839|ref|YP_003877805.1| tryptophanyl-tRNA synthetase [Streptococcus pneumoniae AP200]
 gi|54039699|sp|P67596|SYW_STRR6 RecName: Full=Tryptophanyl-tRNA synthetase; AltName:
           Full=Tryptophan--tRNA ligase; Short=TrpRS
 gi|54042055|sp|P67595|SYW_STRPN RecName: Full=Tryptophanyl-tRNA synthetase; AltName:
           Full=Tryptophan--tRNA ligase; Short=TrpRS
 gi|14973740|gb|AAK76277.1| tryptophanyl-tRNA synthetase [Streptococcus pneumoniae TIGR4]
 gi|15459741|gb|AAL00836.1| Tryptophanyl-tRNA synthetase [Streptococcus pneumoniae R6]
 gi|116077386|gb|ABJ55106.1| tryptophanyl-tRNA synthetase [Streptococcus pneumoniae D39]
 gi|147755979|gb|EDK63022.1| tryptophanyl-tRNA synthetase II [Streptococcus pneumoniae
           SP11-BS70]
 gi|147758838|gb|EDK65834.1| tryptophanyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS69]
 gi|147763227|gb|EDK70166.1| tryptophanyl-tRNA synthetase II [Streptococcus pneumoniae
           SP19-BS75]
 gi|147925684|gb|EDK76760.1| tryptophanyl-tRNA synthetase [Streptococcus pneumoniae SP6-BS73]
 gi|147930826|gb|EDK81807.1| tryptophanyl-tRNA synthetase [Streptococcus pneumoniae SP23-BS72]
 gi|168995800|gb|ACA36412.1| tryptophanyl-tRNA synthetase [Streptococcus pneumoniae
           Hungary19A-6]
 gi|172042420|gb|EDT50466.1| tryptophanyl-tRNA synthetase [Streptococcus pneumoniae CDC1873-00]
 gi|183569900|gb|EDT90428.1| tryptophanyl-tRNA synthetase [Streptococcus pneumoniae CDC1087-00]
 gi|183574004|gb|EDT94532.1| tryptophanyl-tRNA synthetase [Streptococcus pneumoniae CDC0288-04]
 gi|183575932|gb|EDT96460.1| tryptophanyl-tRNA synthetase [Streptococcus pneumoniae CDC3059-06]
 gi|183578075|gb|EDT98603.1| tryptophanyl-tRNA synthetase [Streptococcus pneumoniae MLV-016]
 gi|194356632|gb|ACF55080.1| tryptophanyl-tRNA synthetase [Streptococcus pneumoniae G54]
 gi|220675389|emb|CAR69991.1| tryptophanyl-tRNA synthetase [Streptococcus pneumoniae ATCC 700669]
 gi|225721247|gb|ACO17101.1| tryptophanyl-tRNA synthetase [Streptococcus pneumoniae 70585]
 gi|225722952|gb|ACO18805.1| tryptophanyl-tRNA synthetase [Streptococcus pneumoniae JJA]
 gi|225724872|gb|ACO20724.1| tryptophanyl-tRNA synthetase [Streptococcus pneumoniae P1031]
 gi|225728222|gb|ACO24073.1| tryptophanyl-tRNA synthetase [Streptococcus pneumoniae
           Taiwan19F-14]
 gi|298237340|gb|ADI68471.1| tryptophanyl-tRNA synthetase II [Streptococcus pneumoniae
           TCH8431/19A]
 gi|301795138|emb|CBW37611.1| tryptophanyl-tRNA synthetase [Streptococcus pneumoniae INV104]
 gi|301802890|emb|CBW35671.1| tryptophanyl-tRNA synthetase [Streptococcus pneumoniae INV200]
 gi|302598161|gb|EFL65222.1| tryptophanyl-tRNA synthetase II [Streptococcus pneumoniae BS455]
 gi|302636824|gb|EFL67314.1| tryptophanyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS292]
 gi|302639269|gb|EFL69728.1| tryptophanyl-tRNA synthetase [Streptococcus pneumoniae SP-BS293]
 gi|302641981|gb|EFL72334.1| tryptophanyl-tRNA synthetase [Streptococcus pneumoniae BS458]
 gi|302644376|gb|EFL74629.1| tryptophanyl-tRNA synthetase [Streptococcus pneumoniae BS457]
 gi|302645989|gb|EFL76217.1| tryptophanyl-tRNA synthetase [Streptococcus pneumoniae BS397]
 gi|306410376|gb|ADM85803.1| Tryptophanyl-tRNA synthetase [Streptococcus pneumoniae AP200]
 gi|327388973|gb|EGE87321.1| tryptophanyl-tRNA synthetase [Streptococcus pneumoniae GA04375]
 gi|332071499|gb|EGI81993.1| tryptophanyl-tRNA synthetase [Streptococcus pneumoniae GA41301]
 gi|332198643|gb|EGJ12726.1| tryptophanyl-tRNA synthetase [Streptococcus pneumoniae GA41317]
 gi|332198852|gb|EGJ12934.1| tryptophanyl-tRNA synthetase [Streptococcus pneumoniae GA47368]
 gi|332199051|gb|EGJ13132.1| tryptophanyl-tRNA synthetase [Streptococcus pneumoniae GA47901]
          Length = 341

 Score = 38.3 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 41/244 (16%), Positives = 70/244 (28%), Gaps = 42/244 (17%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKT--GHKPISLMGG---GTSIIGDPSFRDESRRMMRSQE 98
            T   LH GH    +    L +    +     +      T    DP              
Sbjct: 12  PTGK-LHIGHYVGSLKNRVLLQEEDKYDMFVFLADQQALTDHAKDPQ------------T 58

Query: 99  IQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
           I E+I  +  +    +     K+   + +    L  +    +     +    N  +  E 
Sbjct: 59  IVESIGNV-ALDYLAVGLDPNKSTIFIQSQIPELAELSMYYMNLVSLARLERNPTVKTEI 117

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
            +          FL   Y I QA D      NY   + +G +DQ   I    ++      
Sbjct: 118 SQKGFGESIPTGFL--VYPIAQAADITAFKANY---VPVG-TDQKPMIEQTREIVRSFNN 171

Query: 219 P-KLFALTSP-----------LLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNI- 264
                 L  P            L    G  KM K+L+  I+L  +  +     +   ++ 
Sbjct: 172 AYNCDVLVEPEGIYPENERAGRLPGLDGNAKMSKSLNNGIYLADDADT---LRKKVMSMY 228

Query: 265 DDAD 268
            D D
Sbjct: 229 TDPD 232


>gi|313622777|gb|EFR93113.1| tryptophan--tRNA ligase [Listeria innocua FSL J1-023]
          Length = 348

 Score = 38.3 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 34/196 (17%), Positives = 62/196 (31%), Gaps = 35/196 (17%)

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
            + +   +  +S     Y  L A D + L +     +   G DQ  +I    DL ER   
Sbjct: 126 FKDKSDGKAGVSAGLLTYPPLMAADIL-LYQTNLVPV---GEDQKQHIELTRDLAERFNK 181

Query: 219 PKLFALTSPLLTTASG-----------TKMGKT---LSGAIWLNKEMTSPYNFWQYWRN- 263
                 T P +                 KM K+   L  AI+L   +  P    +  ++ 
Sbjct: 182 KHADIFTMPEVFIPKQGARVMSLQDPTKKMSKSDANLKNAIFL---LDPPATIRKKIKSA 238

Query: 264 IDDAD------------VVSFAKRLTTLPMSEIDRMAKL-QGKEINEAKKIIATEITTMV 310
           + D+             V +     + +    I  + +   GK   + K  +A  +   +
Sbjct: 239 VTDSSGIIEYNKEEKPGVSNLLTIYSVITGETIANIEEKYVGKGYGDFKTDLAELVVAEL 298

Query: 311 HGREEAEKAATAAMEC 326
              +E   A   + E 
Sbjct: 299 EPIQERYYAYLESEEL 314


>gi|226292138|gb|EEH47558.1| tryptophanyl-tRNA synthetase [Paracoccidioides brasiliensis Pb18]
          Length = 432

 Score = 38.3 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 17/52 (32%), Gaps = 1/52 (1%)

Query: 15  RGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           RG      +    L+   +      Y G   +  +LH GH        WLQ 
Sbjct: 75  RGLFFSHRDFDHILNKYEAGEPFFMYTGRGPSTDALHLGHTIPFSFTKWLQD 126


>gi|162139381|ref|YP_375975.2| tryptophanyl-tRNA synthetase [Chlorobium luteolum DSM 273]
          Length = 342

 Score = 38.3 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 26/117 (22%), Positives = 45/117 (38%), Gaps = 22/117 (18%)

Query: 167 QSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT-------P 219
           +SL++    Y +LQA D + L K     + +G  DQ  ++    ++  +           
Sbjct: 128 ESLTYGHLGYPVLQAADIL-LYK--GSVVPVG-EDQIPHVEITREIARKFNNHYPHPTKG 183

Query: 220 KLFALTSPLLTTA------SGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRN-IDDAD 268
           ++F    P +T         G  KM K+L   I L+     P    +  RN + D  
Sbjct: 184 EVFLEPEPKITKFSRLVGLDGKAKMSKSLGNTILLS---DGPDEVQKKMRNAVTDTL 237


>gi|78167834|gb|ABB24932.1| tryptophanyl-tRNA synthetase [Chlorobium luteolum DSM 273]
          Length = 333

 Score = 38.3 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 26/117 (22%), Positives = 45/117 (38%), Gaps = 22/117 (18%)

Query: 167 QSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT-------P 219
           +SL++    Y +LQA D + L K     + +G  DQ  ++    ++  +           
Sbjct: 119 ESLTYGHLGYPVLQAADIL-LYK--GSVVPVG-EDQIPHVEITREIARKFNNHYPHPTKG 174

Query: 220 KLFALTSPLLTTA------SGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRN-IDDAD 268
           ++F    P +T         G  KM K+L   I L+     P    +  RN + D  
Sbjct: 175 EVFLEPEPKITKFSRLVGLDGKAKMSKSLGNTILLS---DGPDEVQKKMRNAVTDTL 228


>gi|15807121|ref|NP_295850.1| 30S ribosomal protein S4 [Deinococcus radiodurans R1]
 gi|26399534|sp|Q9RSJ7|RS4_DEIRA RecName: Full=30S ribosomal protein S4
 gi|6459925|gb|AAF11677.1|AE002047_10 ribosomal protein S4 [Deinococcus radiodurans R1]
          Length = 205

 Score = 38.3 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 13/79 (16%), Positives = 33/79 (41%), Gaps = 3/79 (3%)

Query: 320 ATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKI 379
                  F+    + ++P ++ +         L  ++ + GFA++  +AR+ +    I +
Sbjct: 68  EKQFRNLFEE---ASNVPGVTGTVFLQLLERRLDNVVFRMGFASTRRQARQFVGHGHILV 124

Query: 380 NNSIISNEKLQIKLQDFDS 398
           N   +     ++K+ D  S
Sbjct: 125 NGKKVDIASYRVKIGDEIS 143


>gi|319948696|ref|ZP_08022817.1| 30S ribosomal protein S4 [Dietzia cinnamea P4]
 gi|319437598|gb|EFV92597.1| 30S ribosomal protein S4 [Dietzia cinnamea P4]
          Length = 201

 Score = 38.3 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 7/45 (15%), Positives = 20/45 (44%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
            ++ +AG A +  +AR+ +      +N+  ++    ++   D   
Sbjct: 95  NVVYRAGLARTRRQARQLVAHGHFLVNDQKVTIPSYRVSQYDIID 139


>gi|330916756|ref|XP_003297547.1| hypothetical protein PTT_07987 [Pyrenophora teres f. teres 0-1]
 gi|311329706|gb|EFQ94347.1| hypothetical protein PTT_07987 [Pyrenophora teres f. teres 0-1]
          Length = 492

 Score = 38.3 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 22/61 (36%), Gaps = 1/61 (1%)

Query: 15  RGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +    LD+         Y G   ++ ++H GH        WLQ     P+ +
Sbjct: 84  RGLFFSHRDLELILDVYERGDDFLLYTGRGPSSDAMHIGHTIPFEFTKWLQDVFDVPLVI 143

Query: 74  M 74
           M
Sbjct: 144 M 144


>gi|257457324|ref|ZP_05622495.1| tryptophan--tRNA ligase [Treponema vincentii ATCC 35580]
 gi|257445246|gb|EEV20318.1| tryptophan--tRNA ligase [Treponema vincentii ATCC 35580]
          Length = 359

 Score = 38.3 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 37/221 (16%), Positives = 77/221 (34%), Gaps = 35/221 (15%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
            T + LH GH    +      +   +   ++    ++   P            Q I E  
Sbjct: 18  PTGN-LHLGHYVGSIKNRVRLQEEFECFFIIADLHTLTTKP----------DKQYIDELA 66

Query: 104 EKIKGIFSSFIK--YGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLS-FESVR 160
           + ++ +   ++       K+   + +    +C +       ++ +   + R+ S  +  +
Sbjct: 67  DNVRQMALDYLACGIDPEKSVIYLQSAVPEVCELNL--FFSDLVTVPRLQRIPSIKDMAK 124

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
           +    E  L  L   Y +LQA D +    N    L   G D   ++    ++ +R     
Sbjct: 125 AAHLSELPLGLL--GYPVLQAADILLPRAN----LVPVGKDNESHVELTREIAKRFN--Y 176

Query: 221 LFALTSPL----------LTTASGT-KMGKTLSGAIWLNKE 250
           ++    PL          L    G  KM K+L+ AI+L  +
Sbjct: 177 MYGEVFPLPEVMVSDYGSLVGTDGQAKMSKSLNNAIFLCDD 217


>gi|255994577|ref|ZP_05427712.1| tryptophan--tRNA ligase [Eubacterium saphenum ATCC 49989]
 gi|255993290|gb|EEU03379.1| tryptophan--tRNA ligase [Eubacterium saphenum ATCC 49989]
          Length = 326

 Score = 38.3 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 47/301 (15%), Positives = 94/301 (31%), Gaps = 50/301 (16%)

Query: 37  TAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRS 96
             + G   T + +H G+    M  F   +  +  +  +          S   E       
Sbjct: 3   KVFSGVQPTGN-IHLGNYLGAMRQFTELQDEYDTMYCIVDL------HSITVEQDPAELK 55

Query: 97  QEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSF 156
           + I +       I          K    + +N      + ++ +         ++RM   
Sbjct: 56  EHILDVAALYLAIG-----VDPKKATIFVQSNVPAHSELAWLLMCNSYTGE--LSRMTQ- 107

Query: 157 ESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL 216
              + + K  +S     F Y +L A D +     YD  +   G DQ  ++    D+  R 
Sbjct: 108 --YKEKSKGNESSIVGLFTYPVLMAADILL----YDTDVVPVGEDQRQHLELTRDIARRF 161

Query: 217 KTPKLFALTSP----------LLTTAS-GTKMGKT-LSGAI---WLNKEMTSPYNF---- 257
            T      T P          +++    G KM K+  S       L+ E           
Sbjct: 162 NTKYGETFTVPEARTLKTATRIMSLDDPGKKMSKSNESEYSRIALLDDEKKINKTIAKAQ 221

Query: 258 --------WQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTM 309
                   +        +++++    +T     E++ + K      ++ KK +ATEI  +
Sbjct: 222 TDSEGHIRYDEKNKPAVSNLINIYATITCKTKEEVENLYK--DSRYSDFKKDLATEIERL 279

Query: 310 V 310
           +
Sbjct: 280 I 280


>gi|189192653|ref|XP_001932665.1| tryptophanyl-tRNA synthetase [Pyrenophora tritici-repentis
           Pt-1C-BFP]
 gi|187978229|gb|EDU44855.1| tryptophanyl-tRNA synthetase [Pyrenophora tritici-repentis
           Pt-1C-BFP]
          Length = 493

 Score = 38.3 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 22/61 (36%), Gaps = 1/61 (1%)

Query: 15  RGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +    LD+         Y G   ++ ++H GH        WLQ     P+ +
Sbjct: 84  RGLFFSHRDLELILDVYERGDDFLLYTGRGPSSDAMHIGHTIPFEFTKWLQDVFDVPLVI 143

Query: 74  M 74
           M
Sbjct: 144 M 144


>gi|19551397|ref|NP_599399.1| hypothetical protein NCgl0144 [Corynebacterium glutamicum ATCC
           13032]
 gi|62389041|ref|YP_224443.1| hypothetical protein cg0184 [Corynebacterium glutamicum ATCC 13032]
 gi|145294270|ref|YP_001137091.1| hypothetical protein cgR_0226 [Corynebacterium glutamicum R]
 gi|21322911|dbj|BAB97540.1| Uncharacterized ACR [Corynebacterium glutamicum ATCC 13032]
 gi|41324374|emb|CAF18714.1| CONSERVED HYPOTHETICAL PROTEIN [Corynebacterium glutamicum ATCC
           13032]
 gi|140844190|dbj|BAF53189.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 97

 Score = 38.3 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 8/60 (13%), Positives = 19/60 (31%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
              + L   I  A    S   A+  + +  + +N  + +     ++  D    G +    
Sbjct: 10  DETIKLGQFIKLANLVESGGAAKDAIANGDVTVNGEVDTRRGKTLRDGDVVCIGEVCAQV 69


>gi|303247017|ref|ZP_07333293.1| ribosomal protein S4 [Desulfovibrio fructosovorans JJ]
 gi|302491724|gb|EFL51607.1| ribosomal protein S4 [Desulfovibrio fructosovorans JJ]
          Length = 208

 Score = 38.3 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 13/48 (27%), Positives = 24/48 (50%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
            +I + GFA S N+AR+ ++     +N   ++   LQ+K+ D      
Sbjct: 102 NVIYRLGFANSRNQARQLVRHGIFTVNGRRVTIPSLQVKVGDVIEVRE 149


>gi|256420249|ref|YP_003120902.1| pseudouridine synthase [Chitinophaga pinensis DSM 2588]
 gi|256035157|gb|ACU58701.1| pseudouridine synthase [Chitinophaga pinensis DSM 2588]
          Length = 516

 Score = 38.3 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 11/62 (17%), Positives = 23/62 (37%), Gaps = 3/62 (4%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD--FDSTGNIKL 404
              M L   I  +G   S  +A   +K   + +N  +I+    ++  +D    +   I +
Sbjct: 277 PGEMPLNKYIAHSGLC-SRRKAVDFVKEGKVTVNGELITEPAFKVTAKDEVAINNRKINI 335

Query: 405 SF 406
             
Sbjct: 336 QK 337


>gi|222152585|ref|YP_002561760.1| ribosomal large subunit pseudouridine synthase B [Streptococcus
           uberis 0140J]
 gi|222113396|emb|CAR41051.1| ribosomal large subunit pseudouridine synthase B [Streptococcus
           uberis 0140J]
          Length = 240

 Score = 38.3 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 7/34 (20%), Positives = 15/34 (44%)

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
             S  +A   +K   + +N  ++S+    +K  D
Sbjct: 12  VASRRKAEELIKQGLVTLNGQVVSDLATTVKSGD 45


>gi|218296418|ref|ZP_03497161.1| hemolysin A [Thermus aquaticus Y51MC23]
 gi|218243212|gb|EED09743.1| hemolysin A [Thermus aquaticus Y51MC23]
          Length = 235

 Score = 38.3 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 5/39 (12%), Positives = 17/39 (43%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
           +V+ G   S  +A+R +    +++   +++     +   
Sbjct: 7   LVEKGLVESREKAKRLIAEGKVRVGGRVVTKPAHPVPEG 45


>gi|171920388|ref|ZP_02691104.2| tryptophanyl-tRNA synthetase [Ureaplasma parvum serovar 1 str. ATCC
           27813]
 gi|171902823|gb|EDT49112.1| tryptophanyl-tRNA synthetase [Ureaplasma parvum serovar 1 str. ATCC
           27813]
          Length = 333

 Score = 38.3 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 39/283 (13%), Positives = 86/283 (30%), Gaps = 48/283 (16%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   T + L  G+    +  F   +  ++    +    S+   P+  D +      ++I 
Sbjct: 7   GIQPTNN-LTLGNYLGAIKNFVDLQDDYEVFLFVADLHSLT--PNIFDNTDFSTTKRQI- 62

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLL---REIGSFFSVNRMLSFE 157
                I    ++ I          +      L       +L     IG    + +     
Sbjct: 63  -----IATYLAAGID----PKKTCLFYQSDILSIPLLAHILLCSTSIGELTRMTQFKDKS 113

Query: 158 SVRSRLKREQSLSFLEFN-YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL 216
              +++     +       Y  L A D +     ++  +   G DQ  ++     L +R 
Sbjct: 114 IKATKMANNTEMIPSGLLTYPTLMAADIL----TFNADVVPVGQDQKQHLELTRTLADRF 169

Query: 217 KT--------PKLFA--LTSPLLTTAS-GTKMGKT---LSGAIWLNKEMTSPYN------ 256
                     P+++   + + ++       KM K+   L G I+LN      +       
Sbjct: 170 NKRYGNTFKLPQVYIPKIGAKIMDLLDPNIKMSKSSKNLKGVIFLNDSKDIIFKKIKGAL 229

Query: 257 -------FWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG 292
                   +        +++++    LT L   EI+   + Q 
Sbjct: 230 TDNLNQVKYDLTLQPGVSNLMTIYACLTNLSFKEIELKYQQQN 272


>gi|197117349|ref|YP_002137776.1| 30S ribosomal protein S4 [Geobacter bemidjiensis Bem]
 gi|226699068|sp|B5EFS6|RS4_GEOBB RecName: Full=30S ribosomal protein S4
 gi|197086709|gb|ACH37980.1| ribosomal protein S4 [Geobacter bemidjiensis Bem]
          Length = 208

 Score = 38.3 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 13/44 (29%), Positives = 22/44 (50%)

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
           + GFATS +EAR+ ++     +N   ++   LQ+K  D      
Sbjct: 106 RLGFATSRDEARQLVRHGHFTLNGKKVNIPSLQVKAGDVLQLRE 149


>gi|304440167|ref|ZP_07400058.1| isoleucine--tRNA ligase [Peptoniphilus duerdenii ATCC BAA-1640]
 gi|304371430|gb|EFM25045.1| isoleucine--tRNA ligase [Peptoniphilus duerdenii ATCC BAA-1640]
          Length = 1032

 Score = 38.3 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 24/126 (19%), Positives = 44/126 (34%), Gaps = 20/126 (15%)

Query: 155 SFESVRSRLKREQSLSFLEFNYMILQAYDFVELA-KNYDCRLQMGGSDQ---WGNIICGI 210
             + +         + F +++Y      DF +L   ++ C     G DQ   W   +  I
Sbjct: 511 EKDVIDVWFDSGA-MPFAQWHYPFEHKDDFDQLFPADFICE----GIDQTRGWFYSLLAI 565

Query: 211 DLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVV 270
                 K+P    L + L+    G KM K+    +       +P+  +  +     ADVV
Sbjct: 566 STYVTGKSPYKNVLVNDLILDKYGKKMSKSKGNTV-------NPFELFNKY----GADVV 614

Query: 271 SFAKRL 276
            +    
Sbjct: 615 RWYLIY 620


>gi|300787858|ref|YP_003768149.1| ribosomal large subunit pseudouridine synthase B [Amycolatopsis
           mediterranei U32]
 gi|299797372|gb|ADJ47747.1| ribosomal large subunit pseudouridine synthase B [Amycolatopsis
           mediterranei U32]
          Length = 250

 Score = 38.3 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 7/54 (12%), Positives = 24/54 (44%), Gaps = 1/54 (1%)

Query: 341 ISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
           ++  E   G+ L  ++ +AG   S   A   + +  ++++  +++    ++   
Sbjct: 1   MTSSEHPDGVRLQKVLSQAG-VASRRAAEDLIVAGRVEVDGEVVTELGRRVDPD 53


>gi|255530412|ref|YP_003090784.1| RNA-binding S4 domain-containing protein [Pedobacter heparinus DSM
           2366]
 gi|255343396|gb|ACU02722.1| RNA-binding S4 domain protein [Pedobacter heparinus DSM 2366]
          Length = 472

 Score = 38.3 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 15/74 (20%), Positives = 32/74 (43%), Gaps = 5/74 (6%)

Query: 346 VSRGMGLLTL---IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL-QDFDSTGN 401
           V +  GL+ L   I  +G   S  +A   +++  + +N  ++S    +I   +D      
Sbjct: 230 VQKDDGLIRLNRYISNSGIC-SRRKADELIEAGVVSVNGEVVSELGHKIDPVKDQVRYNG 288

Query: 402 IKLSFGKKNHIICH 415
             L   KK +++ +
Sbjct: 289 ELLKREKKIYVLLN 302


>gi|124004166|ref|ZP_01689012.1| ribosomal large subunit pseudouridine synthase B [Microscilla
           marina ATCC 23134]
 gi|123990236|gb|EAY29735.1| ribosomal large subunit pseudouridine synthase B [Microscilla
           marina ATCC 23134]
          Length = 391

 Score = 38.3 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 15/69 (21%), Positives = 27/69 (39%), Gaps = 1/69 (1%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
              M L   I  +G   S  EA + ++   I +N  +I+    Q+   D    G   L  
Sbjct: 156 PEKMRLNRFISNSGVC-SRREADKLIEMGMISVNGKVITEMGFQVSPTDTVKYGKRLLKR 214

Query: 407 GKKNHIICH 415
            K  +++ +
Sbjct: 215 EKFVYVLLN 223


>gi|78043798|ref|YP_361091.1| 30S ribosomal protein S4 [Carboxydothermus hydrogenoformans Z-2901]
 gi|90101680|sp|Q3A9U3|RS4_CARHZ RecName: Full=30S ribosomal protein S4
 gi|77995913|gb|ABB14812.1| ribosomal protein S4 [Carboxydothermus hydrogenoformans Z-2901]
          Length = 208

 Score = 38.3 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 22/119 (18%), Positives = 46/119 (38%), Gaps = 3/119 (2%)

Query: 284 IDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSI-HSQHMPTISIS 342
           I R     G+  +  KK   TE    +  +++A++        F      ++  P I+  
Sbjct: 33  IARRNYAPGQHGHTRKK--PTEYALQLREKQKAKRIYGVLEAQFRRYFEMAERQPGITGE 90

Query: 343 KDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
              V     L  ++ + G A S  +AR+ ++ N   +N   ++     +K+ D  +   
Sbjct: 91  NLLVILERRLDNVVYRLGLAESRAQARQLVRHNFFTVNGRKVNIPSYLVKVGDVIALKE 149


>gi|323136857|ref|ZP_08071938.1| hemolysin A [Methylocystis sp. ATCC 49242]
 gi|322398174|gb|EFY00695.1| hemolysin A [Methylocystis sp. ATCC 49242]
          Length = 242

 Score = 38.3 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 7/40 (17%), Positives = 18/40 (45%)

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
            + + GF  S  +AR  +++  + +N  +++     I   
Sbjct: 9   ALHERGFFESRAKAREAIEAGLVTVNGRVVTKPSAPIADD 48


>gi|300870781|ref|YP_003785652.1| ribosomal large subunit pseudouridine synthase B [Brachyspira
           pilosicoli 95/1000]
 gi|300688480|gb|ADK31151.1| ribosomal large subunit pseudouridine synthase B [Brachyspira
           pilosicoli 95/1000]
          Length = 351

 Score = 38.3 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 14/69 (20%), Positives = 33/69 (47%), Gaps = 1/69 (1%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
              + L+ +I+++GFA S     + + S  +++NN +I +   ++K  D  S     +  
Sbjct: 7   KENVRLVKVILESGFA-SRRNCEKAIMSGRVRVNNQVILDPAYRVKESDSVSIDRNIIER 65

Query: 407 GKKNHIICH 415
             K ++  +
Sbjct: 66  QTKRYMALY 74


>gi|260460313|ref|ZP_05808565.1| hemolysin A [Mesorhizobium opportunistum WSM2075]
 gi|259033958|gb|EEW35217.1| hemolysin A [Mesorhizobium opportunistum WSM2075]
          Length = 254

 Score = 38.3 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 9/43 (20%), Positives = 18/43 (41%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
            L+V+ G   S + AR  ++   + ++  I       + LQ  
Sbjct: 15  DLLVQRGLFASRSRARDAVERGTVTVDGVIARKPGQNVSLQCL 57


>gi|238061095|ref|ZP_04605804.1| 30S ribosomal protein S4 [Micromonospora sp. ATCC 39149]
 gi|237882906|gb|EEP71734.1| 30S ribosomal protein S4 [Micromonospora sp. ATCC 39149]
          Length = 208

 Score = 38.3 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 23/55 (41%), Gaps = 6/55 (10%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGK 408
            ++ +AG+A S + AR+ +K     +N   +     ++K  D           GK
Sbjct: 102 NVVYRAGYAKSRDMARQLVKHGHFTVNGKKVDIPSYRVKEHDIIEV------RGK 150


>gi|209883818|ref|YP_002287675.1| lysyl-tRNA synthetase [Oligotropha carboxidovorans OM5]
 gi|209872014|gb|ACI91810.1| lysyl-tRNA synthetase [Oligotropha carboxidovorans OM5]
          Length = 549

 Score = 38.3 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 19/138 (13%), Positives = 43/138 (31%), Gaps = 7/138 (5%)

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            D+           +M G D   ++     +   L           L     G K+ K+ 
Sbjct: 249 PDWAMRWVALGVDYEMAGKDLIDSVKLSGKICRALGGTPPEGFNYELFLDDKGQKISKSK 308

Query: 242 SGAIWLNK--EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK-LQGKEINEA 298
              + +++     SP +   +      A      +    +    +D   + L G    +A
Sbjct: 309 GNGLTIDEWLRYASPESLALFMYREPKA----AKRLYFDVIPRNVDEYQQFLDGYARQDA 364

Query: 299 KKIIATEITTMVHGREEA 316
           K+ +   +  +  G+ +A
Sbjct: 365 KQRLGNPVWHIHSGKPQA 382


>gi|297583839|ref|YP_003699619.1| tryptophanyl-tRNA synthetase [Bacillus selenitireducens MLS10]
 gi|297142296|gb|ADH99053.1| tryptophanyl-tRNA synthetase [Bacillus selenitireducens MLS10]
          Length = 329

 Score = 38.3 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 45/280 (16%), Positives = 86/280 (30%), Gaps = 50/280 (17%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   + + L  G+    M  F   +  H+    +    + I  P  + E R+ + S    
Sbjct: 7   GIQPSGT-LTLGNYLGAMTHFVDLQEDHESFFCIVDQHA-ITVPQDKLELRKNILSLAAL 64

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
                +    ++          A +     W+  ++ +  + E+       RM      +
Sbjct: 65  YVAVGLDPKKATLFIQSEVPAHAQL----GWM--MQCVSYIGEL------ERMTQ---FK 109

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            +   ++++S     Y  L A D + L K     +   G DQ  ++    DL ER     
Sbjct: 110 DKSDGKEAVSSALLTYPPLMAADIL-LYKTDIVPV---GEDQKQHLELTRDLAERFNHKY 165

Query: 221 LFALTSP------------LLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRN-IDDA 267
               T P             LT  +  KM K+          +  P    +  ++ + D+
Sbjct: 166 NDIFTIPEVRIPKQGARIMSLTDPT-KKMSKSNPNPKSYISMLDEPNTIRKKIKSAVTDS 224

Query: 268 DVVSFAK---------------RLTTLPMSEIDRMAKLQG 292
           D   F                   T   + EI    + +G
Sbjct: 225 DPDIFFDVQEKPGISNLLTIHSLCTDKEIPEIVEAYQGKG 264


>gi|306817967|ref|ZP_07451704.1| tryptophan--tRNA ligase [Mobiluncus mulieris ATCC 35239]
 gi|304649235|gb|EFM46523.1| tryptophan--tRNA ligase [Mobiluncus mulieris ATCC 35239]
          Length = 381

 Score = 38.3 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 35/241 (14%), Positives = 67/241 (27%), Gaps = 46/241 (19%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN 102
            T   LH GH    +     LQ  G     L+          + RD    +   + +   
Sbjct: 53  PTG-FLHIGHYFGTLKSRVELQNLGIDTTVLIADY----QVITDRDNIGNV--REYVLNL 105

Query: 103 IEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYI-DLLREIGSFFSVNRMLSFESVRS 161
           +       ++ I                    +  I ++L    S  +   +    +V++
Sbjct: 106 VADY---LAAGIDPAKSTIFCH--------SQVPAIHEMLVIFLSLVTEAELHRNPTVKA 154

Query: 162 RLKR-EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNI----ICGIDLGERL 216
            ++  E+ ++ L   Y + QA D +    N    L   G DQ  ++    +      +R 
Sbjct: 155 EMEAAERPMTGLLLTYPVHQAADILCAQAN----LVPVGQDQLPHLEQTRVVAKRFNKRY 210

Query: 217 KTPKLFA-------LTSPL----------LTTASGTKMGKTLSGAIWLNKEMTSPYNFWQ 259
                            PL          +    G KM K+    + L           +
Sbjct: 211 PQRDAAGNKVKDSHGVLPLAQALLGRGSMILGTDGQKMSKSRHNTVELGASAEETAKIIK 270

Query: 260 Y 260
            
Sbjct: 271 K 271


>gi|257062155|ref|YP_003140043.1| hemolysin A [Cyanothece sp. PCC 8802]
 gi|256592321|gb|ACV03208.1| hemolysin A [Cyanothece sp. PCC 8802]
          Length = 266

 Score = 38.3 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 29/59 (49%), Gaps = 6/59 (10%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           TL+V+    +S  EA+  +++  +K+N  +I      ++     ST  I+L   K  ++
Sbjct: 8   TLLVERNLCSSRQEAQGLIRAGEVKVNQQVIDKPGTPVE-----STAEIELQA-KPRYV 60


>gi|56696292|ref|YP_166649.1| ribosomal large subunit pseudouridine synthase D [Ruegeria pomeroyi
           DSS-3]
 gi|56678029|gb|AAV94695.1| ribosomal large subunit pseudouridine synthase D [Ruegeria pomeroyi
           DSS-3]
          Length = 342

 Score = 38.3 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 3/25 (12%), Positives = 13/25 (52%)

Query: 370 RHLKSNAIKINNSIISNEKLQIKLQ 394
           R +   A+ ++  ++++ K ++   
Sbjct: 39  RLITEGAVSVDGQVVTDPKARVVEG 63


>gi|188586310|ref|YP_001917855.1| hemolysin A [Natranaerobius thermophilus JW/NM-WN-LF]
 gi|179350997|gb|ACB85267.1| hemolysin A [Natranaerobius thermophilus JW/NM-WN-LF]
          Length = 276

 Score = 38.3 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 21/41 (51%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
            L+V  G+  S  +A+R++ +  + ++N  I     ++ L 
Sbjct: 10  QLLVDKGYFASREQAKRNIMAGLVFVDNQKIDKPGKKVHLD 50


>gi|120437150|ref|YP_862836.1| 30S ribosomal protein S4 [Gramella forsetii KT0803]
 gi|152060951|sp|A0M574|RS4_GRAFK RecName: Full=30S ribosomal protein S4
 gi|117579300|emb|CAL67769.1| 30S ribosomal protein S4 [Gramella forsetii KT0803]
          Length = 201

 Score = 38.3 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 13/82 (15%), Positives = 29/82 (35%), Gaps = 3/82 (3%)

Query: 320 ATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKI 379
                  F+ +  +Q +    + +   SR   ++    + G A S   AR+ +    I +
Sbjct: 66  ERQFRNMFEKATRAQGITGEVLLQLCESRLDNVVY---RMGVAPSRRAARQLVGHRHITV 122

Query: 380 NNSIISNEKLQIKLQDFDSTGN 401
           N  +++     +K  D      
Sbjct: 123 NGELVNIPSYHLKAGDVVGVRE 144


>gi|11499865|ref|NP_071109.1| 30S ribosomal protein S4 [Archaeoglobus fulgidus DSM 4304]
 gi|3914900|sp|O28000|RS4_ARCFU RecName: Full=30S ribosomal protein S4P
 gi|2648246|gb|AAB88980.1| SSU ribosomal protein S4P (rps4P) [Archaeoglobus fulgidus DSM 4304]
          Length = 172

 Score = 38.3 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 21/130 (16%), Positives = 46/130 (35%), Gaps = 6/130 (4%)

Query: 267 ADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMEC 326
             V+ +          E+ R   +  K    A+ ++A        G     KA T   + 
Sbjct: 28  QLVIKYG----LRNKRELWRFQNILRKYRRVARDLLAEIGLPGKEGEIAKAKAQTVIKKL 83

Query: 327 FDMSIHSQHMPTISISKDEVSRGM--GLLTLIVKAGFATSTNEARRHLKSNAIKINNSII 384
             M I  ++     I    V   +   L T++ + G A +  +AR+ +    I ++   +
Sbjct: 84  NKMGILPENATLDDILNLSVEDFLERRLQTMVYRQGLARTIKQARQFITHGHIAVDGRRV 143

Query: 385 SNEKLQIKLQ 394
           ++    +  +
Sbjct: 144 TSPSFIVTKE 153


>gi|315612170|ref|ZP_07887085.1| tryptophan--tRNA ligase [Streptococcus sanguinis ATCC 49296]
 gi|315315731|gb|EFU63768.1| tryptophan--tRNA ligase [Streptococcus sanguinis ATCC 49296]
          Length = 341

 Score = 38.3 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 41/244 (16%), Positives = 72/244 (29%), Gaps = 42/244 (17%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKT--GHKPISLMGG---GTSIIGDPSFRDESRRMMRSQE 98
            T   LH GH    +    L +    ++    +      T    DP              
Sbjct: 12  PTGK-LHIGHYVGSLKNRVLLQEEDKYEMFVFLADQQALTDHAKDPQ------------T 58

Query: 99  IQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
           I E+I  +  +    +     K+   + +    L  +    +     +    N  +  E 
Sbjct: 59  IVESIGNV-ALDYLAVGLDPSKSTIFIQSQIPELAELSMYYMNLVSLARLERNPTVKTEI 117

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
            +          FL   Y I QA D      NY   + +G +DQ   I    ++      
Sbjct: 118 AQKGFGESIPTGFL--VYPIAQAADITAFKANY---VPVG-TDQKPMIEQTREIVRSFNH 171

Query: 219 P-KLFALTSP-----------LLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNI- 264
                 L  P            L    G  KM K+L+  I+L  +  +     +   ++ 
Sbjct: 172 AYNCEVLVEPEGIYPENERAGRLPGLDGNAKMSKSLNNGIYLADDADT---LRKKVMSMY 228

Query: 265 DDAD 268
            D+D
Sbjct: 229 TDSD 232


>gi|311106648|ref|YP_003979501.1| RNA-binding S4 domain-containing protein [Achromobacter
           xylosoxidans A8]
 gi|310761337|gb|ADP16786.1| RNA-binding S4 domain protein [Achromobacter xylosoxidans A8]
          Length = 81

 Score = 38.3 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 10/69 (14%), Positives = 28/69 (40%)

Query: 336 MPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           MP I  +  + S  + +  L+   G   S    +  +    + +   + S +  +I+   
Sbjct: 1   MPIIEFTLAQGSPYIEVNQLLKATGVCDSGGAGKMLVAEGHVSVGGVVESRKTAKIRAGQ 60

Query: 396 FDSTGNIKL 404
             + G++++
Sbjct: 61  IVTCGDVRI 69


>gi|212638876|ref|YP_002315396.1| Pseudouridine synthase [Anoxybacillus flavithermus WK1]
 gi|212560356|gb|ACJ33411.1| Pseudouridine synthase [Anoxybacillus flavithermus WK1]
          Length = 255

 Score = 38.3 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 27/63 (42%), Gaps = 1/63 (1%)

Query: 344 DEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
            EV+    L  +I  AG   S  +A + +    +K+N  +++   +++  QD      I 
Sbjct: 6   SEVNEMERLQKVIAHAG-VASRRKAEQLIVEGKVKVNGKVVTELGVKVSPQDRIEVDGIP 64

Query: 404 LSF 406
           L  
Sbjct: 65  LER 67


>gi|218249068|ref|YP_002374439.1| hemolysin A [Cyanothece sp. PCC 8801]
 gi|218169546|gb|ACK68283.1| hemolysin A [Cyanothece sp. PCC 8801]
          Length = 266

 Score = 38.3 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 29/59 (49%), Gaps = 6/59 (10%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHI 412
           TL+V+    +S  EA+  +++  +K+N  +I      ++     ST  I+L   K  ++
Sbjct: 8   TLLVERNLCSSRQEAQGLIRAGEVKVNQQVIDKPGTPVE-----STAEIELQA-KPRYV 60


>gi|172035830|ref|YP_001802331.1| hemolysin A [Cyanothece sp. ATCC 51142]
 gi|171697284|gb|ACB50265.1| hemolysin A [Cyanothece sp. ATCC 51142]
          Length = 270

 Score = 38.3 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 23/39 (58%)

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL 393
           L+V+    +S  +A+R +++  +K+N  II     +I++
Sbjct: 9   LLVERNLCSSRQQAQRCIRAGEVKVNQRIIDKPGTEIEI 47


>gi|146283947|ref|YP_001174100.1| tryptophanyl-tRNA synthetase [Pseudomonas stutzeri A1501]
 gi|145572152|gb|ABP81258.1| tryptophanyl-tRNA synthetase [Pseudomonas stutzeri A1501]
          Length = 452

 Score = 38.3 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 18/95 (18%), Positives = 33/95 (34%), Gaps = 18/95 (18%)

Query: 166 EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL-GER---LKTPKL 221
           +  ++   ++Y +L A D + +   +   +   G DQ  ++    D+           + 
Sbjct: 126 DAGVTMGLYSYPVLMAADIL-MFNAHKVPV---GRDQIQHVEMARDIAQRFNHLFGNGRE 181

Query: 222 FALTSP---------LLTTASGTKMGKTLSGAIWL 247
           F  T P          L    G KM K+    I L
Sbjct: 182 F-FTLPEAVIEESVATLPGLDGRKMSKSYDNTIPL 215


>gi|331701962|ref|YP_004398921.1| tryptophanyl-tRNA synthetase [Lactobacillus buchneri NRRL B-30929]
 gi|329129305|gb|AEB73858.1| tryptophanyl-tRNA synthetase [Lactobacillus buchneri NRRL B-30929]
          Length = 338

 Score = 38.3 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 33/226 (14%), Positives = 70/226 (30%), Gaps = 41/226 (18%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     LQ +G ++   ++    ++  +    ++ R  +    +  
Sbjct: 12  PTGK-LHIGHYVGSLKNRVELQNSGDYETFIMIADMQALTDNARDPEKIRHSLIQVALDY 70

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRM-----LSF 156
               I    S+ +                        +L +   +  +V+R+     +  
Sbjct: 71  LAVGIDPQKSTILVQSQIP---------------ALPELTQHYSNLVTVSRLNRNPTVKN 115

Query: 157 ESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL 216
           E  + +  +   + F    Y I QA D           + +G  DQ   +    ++    
Sbjct: 116 EIKQKKFGQSVPVGFA--MYPISQAADITAFKA---TTVPVG-DDQEPMLEQTREIVRTF 169

Query: 217 KTP-------KLFALTSPL----LTTASGT-KMGKTLSGAIWLNKE 250
            +        +      P     +    G  KM K+L  AI+L  +
Sbjct: 170 NSVYNDDILVEPEGYFPPKGMGRIPGLDGNAKMSKSLGNAIYLADD 215


>gi|327482275|gb|AEA85585.1| tryptophanyl-tRNA synthetase [Pseudomonas stutzeri DSM 4166]
          Length = 452

 Score = 38.3 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 18/95 (18%), Positives = 33/95 (34%), Gaps = 18/95 (18%)

Query: 166 EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL-GER---LKTPKL 221
           +  ++   ++Y +L A D + +   +   +   G DQ  ++    D+           + 
Sbjct: 126 DAGVTMGLYSYPVLMAADIL-MFNAHKVPV---GRDQIQHVEMARDIAQRFNHLFGNGRE 181

Query: 222 FALTSP---------LLTTASGTKMGKTLSGAIWL 247
           F  T P          L    G KM K+    I L
Sbjct: 182 F-FTLPEAVIEESVATLPGLDGRKMSKSYDNTIPL 215


>gi|320160994|ref|YP_004174218.1| putative hemolysin [Anaerolinea thermophila UNI-1]
 gi|319994847|dbj|BAJ63618.1| putative hemolysin [Anaerolinea thermophila UNI-1]
          Length = 272

 Score = 38.3 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 29/58 (50%), Gaps = 3/58 (5%)

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ---DFDSTGNIKLSFGKK 409
           L+V+ G A S   A+R + +  I+++N I++    +++     + DS        G+K
Sbjct: 17  LLVQRGLAESRTVAQRLILAGRIRVSNEIVTEPSRRVEEDVPLNIDSGPKYVSRGGEK 74


>gi|300782638|ref|YP_003762929.1| 30S ribosomal protein S4 [Amycolatopsis mediterranei U32]
 gi|299792152|gb|ADJ42527.1| small subunit ribosomal protein S4 [Amycolatopsis mediterranei U32]
          Length = 201

 Score = 38.3 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 19/45 (42%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
            +I +AG A +  +AR+ +      +N   ++    Q+   D   
Sbjct: 95  NVIYRAGIARTRRQARQLVSHGHFLVNGVKVNVPSYQVTKWDIID 139


>gi|302524021|ref|ZP_07276363.1| ribosomal protein S4 [Streptomyces sp. AA4]
 gi|302432916|gb|EFL04732.1| ribosomal protein S4 [Streptomyces sp. AA4]
          Length = 201

 Score = 38.3 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 19/45 (42%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
            +I +AG A +  +AR+ +      +N   ++    Q+   D   
Sbjct: 95  NVIYRAGIARTRRQARQLVSHGHFLVNGVKVNVPSYQVTKWDIID 139


>gi|124513482|ref|XP_001350097.1| tryptophan--tRNA ligase, putative [Plasmodium falciparum 3D7]
 gi|23615514|emb|CAD52506.1| tryptophan--tRNA ligase, putative [Plasmodium falciparum 3D7]
          Length = 632

 Score = 38.3 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 57/340 (16%), Positives = 109/340 (32%), Gaps = 64/340 (18%)

Query: 15  RGFIHQISNPR-ELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG      +    L+          Y G   ++ S+H GHL       +LQ+  + P+ +
Sbjct: 281 RGIFFSHRDLDFLLNYYEQHKCFYIYTGRGPSSLSMHLGHLIPFYFCKYLQEAFNVPLVI 340

Query: 74  -MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWL 132
            +      + + ++  E    + ++ +++            I  G       +  N    
Sbjct: 341 QLSDDEKYLFNQNYSLEYINTLTNENVKD-----------IISVGLNPELTFIFKNTE-Y 388

Query: 133 CSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ-AYDFVE----- 186
               Y  +L  I    ++N+ ++            S +  + +Y   Q A  F +     
Sbjct: 389 AGYLYPTVL-SIHKKTTLNQSMNVFGF------NHSDNIGKISYPSFQIAPCFSQCFPNF 441

Query: 187 LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK---LFALTSPLLTTASGTK------- 236
           L KN  C +  G  DQ        D+  ++   K   + ++  P L   +          
Sbjct: 442 LGKNIPCLVPQG-IDQDPYFRLSRDIAVKMALHKPVVVHSVFMPGLQGVNSKMSSTKKKK 500

Query: 237 --MGKT------LSGAIWLN------KEMTSPYNFWQYWRNID---------DADV-VSF 272
              GK+       +  I+L       K   + Y F      I          D D+   +
Sbjct: 501 DDNGKSNSTFDHNNSVIFLTDTPEQIKNKINKYAFSGGGTTIQEHREKGGNLDKDISYQY 560

Query: 273 AKRL--TTLPMSEIDRMAKLQGKEINEAKKIIATEITTMV 310
            + L      ++EI    K       E KKI+   +T +V
Sbjct: 561 LRYLLEDDNKLNEIGEKYKKGEMLSGEIKKILIDVLTELV 600


>gi|303328069|ref|ZP_07358508.1| ribosomal protein S4 [Desulfovibrio sp. 3_1_syn3]
 gi|302861895|gb|EFL84830.1| ribosomal protein S4 [Desulfovibrio sp. 3_1_syn3]
          Length = 208

 Score = 38.3 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 46/112 (41%), Gaps = 3/112 (2%)

Query: 285 DRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM-PTISISK 343
           DR     G+     KK+  +E    +  +++  +A       F        M   ++ + 
Sbjct: 34  DRRPYAPGQHGRARKKV--SEYAVQLREKQKTRRAYGVLERQFHGYFEKAEMQKGVTGTN 91

Query: 344 DEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
             V     L  ++ + GFA S N+AR+ ++     +N   ++   LQ+K+ D
Sbjct: 92  LLVILERRLDNVVYRLGFANSRNQARQLVRHGIFTLNGHKVTIPSLQVKVGD 143


>gi|225850762|ref|YP_002730996.1| 30S ribosomal protein S4 [Persephonella marina EX-H1]
 gi|254764604|sp|C0QQQ0|RS4_PERMH RecName: Full=30S ribosomal protein S4
 gi|225645002|gb|ACO03188.1| ribosomal protein S4 [Persephonella marina EX-H1]
          Length = 205

 Score = 38.3 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 11/70 (15%), Positives = 25/70 (35%), Gaps = 8/70 (11%)

Query: 340 SISKDEVSRGMGLLTLI--------VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
             ++   + G  LL L+         + GFA +  +AR+ ++     +N   +     ++
Sbjct: 77  EAARSAGNTGQILLQLLERRLDNVVYRLGFAKTRRQARQLVRHGHFLVNGRKVDIPSYRV 136

Query: 392 KLQDFDSTGN 401
              D      
Sbjct: 137 DPGDIIELRE 146


>gi|188996649|ref|YP_001930900.1| pseudouridine synthase [Sulfurihydrogenibium sp. YO3AOP1]
 gi|188931716|gb|ACD66346.1| pseudouridine synthase [Sulfurihydrogenibium sp. YO3AOP1]
          Length = 244

 Score = 38.3 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 28/62 (45%), Gaps = 3/62 (4%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD--FDSTGNIKLSFGKKNHII 413
           I ++G   S  +A   +K   +K+N  II +   +I  +    +  GNI     KK +I 
Sbjct: 9   IAQSGIC-SRRKADELIKEGKVKVNGEIIKDLGAKINPEKDIVEVEGNIIKPVEKKIYIK 67

Query: 414 CH 415
            +
Sbjct: 68  IY 69


>gi|225872764|ref|YP_002754221.1| leucine--tRNA ligase [Acidobacterium capsulatum ATCC 51196]
 gi|225792609|gb|ACO32699.1| leucine--tRNA ligase [Acidobacterium capsulatum ATCC 51196]
          Length = 887

 Score = 38.3 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 29/149 (19%), Positives = 50/149 (33%), Gaps = 25/149 (16%)

Query: 210 IDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYN-----FWQYWRNI 264
            DLG          L +  +   +G KM K+    +   ++M + Y       +  +   
Sbjct: 617 RDLGIVKNDEPATRLFTQGMVIKNGAKMSKSKGNVVSP-EDMIARYGADATRMYALFAAP 675

Query: 265 DDAD----------VVSFAKRLTTLPMSEIDRMAKLQ-GKEINEA--KKII------ATE 305
            D D          V  F  R+  L M   +R  +   G E N A  + ++        +
Sbjct: 676 PDRDLDWQEDGVAGVSRFLSRVYRLAMRHAERAKQASGGAEANSATEQALLRKLHQTIRK 735

Query: 306 ITTMVHGREEAEKAATAAMECFDMSIHSQ 334
           IT    GR        A ME  + +  ++
Sbjct: 736 ITEDFGGRWHFNTCIAAIMELVNTATAAE 764


>gi|297618356|ref|YP_003703515.1| ribosomal protein S4 [Syntrophothermus lipocalidus DSM 12680]
 gi|297146193|gb|ADI02950.1| ribosomal protein S4 [Syntrophothermus lipocalidus DSM 12680]
          Length = 209

 Score = 38.3 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 19/110 (17%), Positives = 38/110 (34%), Gaps = 14/110 (12%)

Query: 292 GKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMG 351
           G ++ E +K         ++G  E           F+ +      P I+           
Sbjct: 55  GSQLREKQKA------KRIYGILE-----RQFRNYFEKAERQ---PGITGENLLALLERR 100

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
           L  ++ + GFA S  EAR+ +      +N   ++   + +K+ D      
Sbjct: 101 LDNVVYRLGFAGSRPEARQLITHGHFLLNGRKVNIPSILVKVGDVIQVKE 150


>gi|253581558|ref|ZP_04858783.1| ribosomal large subunit pseudouridine synthase B [Fusobacterium
           varium ATCC 27725]
 gi|251836628|gb|EES65163.1| ribosomal large subunit pseudouridine synthase B [Fusobacterium
           varium ATCC 27725]
          Length = 236

 Score = 38.3 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 13/62 (20%), Positives = 24/62 (38%), Gaps = 8/62 (12%)

Query: 348 RGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFG 407
             M +   +   G A S  E  + ++  +IKIN    +   +++  +D           G
Sbjct: 2   EEMRINKYLASLGIA-SRREVDKMIEEGSIKINGEKAT-PGIKVSDKDEIYI------RG 53

Query: 408 KK 409
           KK
Sbjct: 54  KK 55


>gi|218506712|ref|ZP_03504590.1| RNA-pseudouridine synthase protein, ribosomal large subunit B
           [Rhizobium etli Brasil 5]
          Length = 102

 Score = 38.3 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 9/54 (16%), Positives = 24/54 (44%), Gaps = 1/54 (1%)

Query: 340 SISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL 393
            ++ D   + + L   + K G+  S  +A R +  + + I+   +++    + L
Sbjct: 15  KLTADAAGKRVTLPRALSKLGYC-SRTQAERLIAESRVSIDGRTVNDPSAWVDL 67


>gi|145297162|ref|YP_001140003.1| tryptophanyl-tRNA synthetase II [Aeromonas salmonicida subsp.
           salmonicida A449]
 gi|142849934|gb|ABO88255.1| tryptophanyl-tRNA synthetase [Aeromonas salmonicida subsp.
           salmonicida A449]
          Length = 337

 Score = 38.3 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 33/229 (14%), Positives = 70/229 (30%), Gaps = 31/229 (13%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
            T   LH GH    +      +  ++   ++    ++       D       ++     +
Sbjct: 12  PTGK-LHIGHYVGSLRQRVEAQHHYRQFVMIADLQAL------TDNGHNP--AKVTDNVL 62

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL 163
           E +    ++ +     KT   + +    L  +    L     +    N  +  E  +   
Sbjct: 63  EVMADYLAAGLD--PAKTTFCLQSALPALAELTTYYLNLVSVARLERNPTVKAEIQQKGF 120

Query: 164 KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK---TPK 220
           +R     FL   Y + QA D       +   + +G  DQ   +    ++  R       +
Sbjct: 121 ERSLPAGFL--IYPVSQAADITAFRATH---VPVG-EDQLPMLEQTNEIVRRFNALVGKE 174

Query: 221 LFALTSPLL------TTASGT-KMGKTLSGAIWLN----KEMTSPYNFW 258
           +     P+L          G  KM K+L   I L     +   + +  +
Sbjct: 175 VLTECQPILSDTGRLPGIDGKAKMSKSLGNTIELGMSAEEVKQAVFAMY 223


>gi|118471390|ref|YP_890748.1| elongation factor G [Mycobacterium smegmatis str. MC2 155]
 gi|118172677|gb|ABK73573.1| translation elongation factor EF-G [Mycobacterium smegmatis str.
           MC2 155]
          Length = 731

 Score = 38.3 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 18/56 (32%), Positives = 24/56 (42%)

Query: 282 SEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMP 337
             ID   K   +E NE +   A  IT + H R   + A TAA E F   +   + P
Sbjct: 123 ETIDEPTKTLWQECNEVQMPRAVVITKLDHPRANYDAALTAAQEAFGDKVAPLYFP 178


>gi|300710387|ref|YP_003736201.1| 30S ribosomal protein S4e [Halalkalicoccus jeotgali B3]
 gi|299124070|gb|ADJ14409.1| 30S ribosomal protein S4e [Halalkalicoccus jeotgali B3]
          Length = 236

 Score = 38.3 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 11/53 (20%), Positives = 21/53 (39%), Gaps = 1/53 (1%)

Query: 347 SRGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
             G+ LL ++    G+  S  EA        + +N   +S+ +  I + D   
Sbjct: 34  EEGVPLLIVLRDVLGYVDSKKEAMYATNEGNVLVNGEPVSDVRRPIGMFDILG 86


>gi|255016945|ref|ZP_05289071.1| tryptophanyl-tRNA synthetase [Listeria monocytogenes FSL F2-515]
          Length = 286

 Score = 38.3 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 35/204 (17%), Positives = 64/204 (31%), Gaps = 45/204 (22%)

Query: 143 EIGSFFSVNRMLSFES----------VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYD 192
           E+ +      +L               + +   +  +S     Y  L A D +     Y 
Sbjct: 83  EVAAHAQAAWILQCNVYIGELERMTQFKDKSAGKAGVSAGLLTYPPLMAADILL----YQ 138

Query: 193 CRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSP----------LLTTASGT-KMGKT- 240
             L   G DQ  +I    DL ER         T P          +++    T KM K+ 
Sbjct: 139 TDLVPVGEDQKQHIELTRDLAERFNKKHADIFTMPEVFIPKQGARVMSLQDPTKKMSKSD 198

Query: 241 --LSGAIWLNKEMTSPYNFWQYWRN-IDDAD------------VVSFAKRLTTLPMSEID 285
             L  AI+L   +  P    +  ++ + D+             V +     + +    I 
Sbjct: 199 ANLKNAIFL---LDPPATIRKKIKSAVTDSSGIIEYNKEEKPGVSNLLTIYSVITGETIA 255

Query: 286 RMAKL-QGKEINEAKKIIATEITT 308
            + +   GK   + K  +A  + +
Sbjct: 256 SIEEKYVGKGYGDFKTDLAELVVS 279


>gi|323135793|ref|ZP_08070876.1| RNA-binding S4 domain protein [Methylocystis sp. ATCC 49242]
 gi|322398884|gb|EFY01403.1| RNA-binding S4 domain protein [Methylocystis sp. ATCC 49242]
          Length = 640

 Score = 38.3 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 10/50 (20%), Positives = 20/50 (40%), Gaps = 1/50 (2%)

Query: 348 RGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
            G  +   + +AG   S  EA + +    + +N  ++ N    +K  D  
Sbjct: 85  EGERIAKAMARAGVC-SRREAEQWIAEGRVAVNGVVLPNAAFNVKEGDRI 133


>gi|293364505|ref|ZP_06611230.1| tryptophan--tRNA ligase [Streptococcus oralis ATCC 35037]
 gi|307702793|ref|ZP_07639743.1| tryptophanyl-tRNA synthetase [Streptococcus oralis ATCC 35037]
 gi|291317013|gb|EFE57441.1| tryptophan--tRNA ligase [Streptococcus oralis ATCC 35037]
 gi|307623649|gb|EFO02636.1| tryptophanyl-tRNA synthetase [Streptococcus oralis ATCC 35037]
          Length = 342

 Score = 38.3 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 41/244 (16%), Positives = 70/244 (28%), Gaps = 42/244 (17%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKT--GHKPISLMGG---GTSIIGDPSFRDESRRMMRSQE 98
            T   LH GH    +    L +    +     +      T    DP              
Sbjct: 12  PTGK-LHIGHYVGSLKNRVLLQEEDKYDMFVFLADQQALTDHAKDPQ------------T 58

Query: 99  IQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
           I E+I  +  +    +     K+   + +    L  +    +     +    N  +  E 
Sbjct: 59  IVESIGNV-ALDYLAVGLDPSKSTIFIQSQIPELAELSMYYMNLVSLARLERNPTVKTEI 117

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
            +          FL   Y I QA D      NY   + +G +DQ   I    ++      
Sbjct: 118 AQKGFGESIPTGFL--VYPIAQAADITAFKANY---VPVG-TDQKPMIEQTREIVRSFNH 171

Query: 219 P-KLFALTSP-----------LLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNI- 264
                 L  P            L    G  KM K+L+  I+L  +  +     +   ++ 
Sbjct: 172 AYNCEVLVEPEGVYPENERAGRLPGLDGNAKMSKSLNNGIYLADDADT---LRKKVMSMY 228

Query: 265 DDAD 268
            D D
Sbjct: 229 TDPD 232


>gi|119469659|ref|ZP_01612528.1| putative ribosomal RNA pseudouridylate synthase [Alteromonadales
           bacterium TW-7]
 gi|119446906|gb|EAW28177.1| putative ribosomal RNA pseudouridylate synthase [Alteromonadales
           bacterium TW-7]
          Length = 230

 Score = 38.3 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 11/54 (20%), Positives = 20/54 (37%), Gaps = 1/54 (1%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
           + L   I  AG   S  +A R +    + +NN   ++     +  D    G + 
Sbjct: 5   IRLAKYIAHAGVC-SRKQASRLIDEGVVTVNNRPANHIDHVDEQDDIIVNGQVV 57


>gi|73540535|ref|YP_295055.1| hypothetical protein Reut_A0832 [Ralstonia eutropha JMP134]
 gi|72117948|gb|AAZ60211.1| conserved hypothetical protein [Ralstonia eutropha JMP134]
          Length = 80

 Score = 38.3 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 10/66 (15%), Positives = 25/66 (37%)

Query: 341 ISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG 400
           I+ +     + L  L+  AG   S    +  + +  + ++    S +  +I++    S  
Sbjct: 12  ITFELDGEFIALNDLLKLAGICDSGGAGKALVAAGEVSVDGEPESRKTAKIRVGQVVSLA 71

Query: 401 NIKLSF 406
            I +  
Sbjct: 72  GIDIRV 77


>gi|55980515|ref|YP_143812.1| hemolysin [Thermus thermophilus HB8]
 gi|55771928|dbj|BAD70369.1| hemolysin [Thermus thermophilus HB8]
          Length = 235

 Score = 38.3 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 5/39 (12%), Positives = 17/39 (43%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
           +V+ G   S  +A+R ++   +++   ++      +   
Sbjct: 7   LVERGLVESREKAKRLIQEGKVRVEGKVVQKPAHPVPEG 45


>gi|332359504|gb|EGJ37323.1| tryptophan--tRNA ligase [Streptococcus sanguinis SK1056]
          Length = 341

 Score = 38.3 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 41/232 (17%), Positives = 62/232 (26%), Gaps = 48/232 (20%)

Query: 44  LTASSLHAGHLTQ-LMLLFWLQKTGHKPISLM----GGGTSIIGDPSFRDESRRMMRSQE 98
            T   LH GH    L     LQ  G   + +        T    DP              
Sbjct: 12  PTGK-LHIGHYVGSLRNRVLLQDQGKYDMFVFLADQQALTDHAKDPQ------------- 57

Query: 99  IQENIEKIKGIFSSFIK--YGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSF 156
               +E I  +   ++       K    + +    L  +    +     +    N  +  
Sbjct: 58  --TIVESIGNVALDYLAAGLDPEKVTIFIQSQIPELAELSMYYMNLVSLARLERNPTVKT 115

Query: 157 ESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL 216
           E  +          FL   Y I QA D      N+   + +G  DQ   I    ++    
Sbjct: 116 EIAQKGFGESLPTGFL--VYPISQAADITAFKANF---VPVG-HDQKPMIEQTREIVRSF 169

Query: 217 KTPKLFALTSPL---------------LTTASGT-KMGKTLSGAIWLNKEMT 252
                   T  L               L    G  KM K+L+  I+L   M 
Sbjct: 170 NHAYQ---TDVLVEPEGIYPENEAAGRLPGLDGNAKMSKSLNNGIYLADNMD 218


>gi|294678146|ref|YP_003578761.1| lysyl-tRNA synthetase [Rhodobacter capsulatus SB 1003]
 gi|294476966|gb|ADE86354.1| lysyl-tRNA synthetase [Rhodobacter capsulatus SB 1003]
          Length = 534

 Score = 38.3 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 26/134 (19%), Positives = 43/134 (32%), Gaps = 18/134 (13%)

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            DF       D   +M G D   N      + E L   K    T  L     G K+ K+ 
Sbjct: 236 PDFGMRWAALDVDFEMYGKDHSTNTPIYDGICEVLGGRKPEHFTYELFLDDQGQKISKSK 295

Query: 242 SGAI----WLNKEMTS--PYNFWQY-------WRNIDDADVVSFAKRLTTLPMSEIDRMA 288
              +    WL+   T    Y  +Q        W ++    V  + ++L   P   +++  
Sbjct: 296 GNGLTIDEWLSYAATESLSYFMYQKPKTAKRLWWDVIPKAVDEYHQQLRAYPTQPVEKQI 355

Query: 289 -----KLQGKEINE 297
                 + G +  E
Sbjct: 356 DNPVWHIHGGQPPE 369


>gi|166032888|ref|ZP_02235717.1| hypothetical protein DORFOR_02609 [Dorea formicigenerans ATCC
           27755]
 gi|166027245|gb|EDR46002.1| hypothetical protein DORFOR_02609 [Dorea formicigenerans ATCC
           27755]
          Length = 69

 Score = 38.3 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 7/33 (21%), Positives = 14/33 (42%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNS 382
           + L   +  AG   S  EA+  ++   + +N  
Sbjct: 11  IKLGQALKAAGLVESGVEAKEVIQDGQVSVNGE 43


>gi|70951642|ref|XP_745045.1| tryptophan--tRNA ligase [Plasmodium chabaudi chabaudi]
 gi|56525240|emb|CAH81224.1| tryptophan--tRNA ligase, putative [Plasmodium chabaudi chabaudi]
          Length = 367

 Score = 38.3 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 23/53 (43%), Gaps = 4/53 (7%)

Query: 25  RELDILCS----QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           R+LD L +          Y G   ++ S+H GHL       +LQ   + P+ +
Sbjct: 301 RDLDFLLNYYEKNKSFYIYTGRGPSSLSMHLGHLIPFYFCKYLQDAFNVPLII 353


>gi|315635751|ref|ZP_07891014.1| tryptophan--tRNA ligase [Arcobacter butzleri JV22]
 gi|315480048|gb|EFU70718.1| tryptophan--tRNA ligase [Arcobacter butzleri JV22]
          Length = 314

 Score = 38.3 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 17/82 (20%), Positives = 30/82 (36%), Gaps = 14/82 (17%)

Query: 174 FNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK---TPKLFAL------ 224
           F+Y +L A D +     +D  +   G DQ  ++    D+          ++F L      
Sbjct: 122 FSYPVLMAADILL----FDSNIVPVGKDQIQHVEMTRDIATSFNHAYGKEIFILPEAKVD 177

Query: 225 -TSPLLTTASGTKMGKTLSGAI 245
                +    G KM K+ +  I
Sbjct: 178 EVVATVPGTDGAKMSKSYNNTI 199


>gi|294497472|ref|YP_003561172.1| tryptophanyl-tRNA synthetase [Bacillus megaterium QM B1551]
 gi|294347409|gb|ADE67738.1| tryptophanyl-tRNA synthetase [Bacillus megaterium QM B1551]
          Length = 328

 Score = 38.3 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 51/325 (15%), Positives = 96/325 (29%), Gaps = 56/325 (17%)

Query: 37  TAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRS 96
           T + G   + + +  G+    M  F   +  +     +    + I  P  R   R+ +RS
Sbjct: 3   TIFSGIQPSGT-ITLGNYIGAMKQFVELQHDYNCHFCIVDQHA-ITTPQDRLALRKNIRS 60

Query: 97  QEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSF 156
                    I    S+                  W+  ++ +  + E+       RM   
Sbjct: 61  LAALYVAVGIDPAKSTLFIQSEVPAHTE----AGWM--LQCVAYIGEL------ERMTQ- 107

Query: 157 ESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL 216
              + +   ++++S     Y  L A D +     Y+  L   G DQ  ++    DL ER 
Sbjct: 108 --FKDKSAGKEAVSAGLLTYPPLMAADILL----YNTDLVPVGEDQKQHLELTRDLAERF 161

Query: 217 KTPKLFALTSPLLTTAS-G----------TKMGKTLSGAIWLNKEMTSPYNFWQYWRN-I 264
                   T P +     G           KM K+          +       +  ++ +
Sbjct: 162 NKKYNDIFTIPEVRIPKVGARVMSLQDPTKKMSKSDPNQKAFITLLDDAKTIEKKIKSAV 221

Query: 265 DDAD-VVSFAK--------------RLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTM 309
            D++ +V + K               L    + +I+ M   +GK   + K   A  +   
Sbjct: 222 TDSEGIVRYDKENKPGISNLLSIYSILANKSIEDIEAMY--EGKGYGDFKADTAKVV--- 276

Query: 310 VHGREEAEKAATAAMECFDMSIHSQ 334
               E          E  D S    
Sbjct: 277 ---AEALAPIQERYYELVDSSELDD 298


>gi|242309306|ref|ZP_04808461.1| leucyl-tRNA synthetase [Helicobacter pullorum MIT 98-5489]
 gi|239524347|gb|EEQ64213.1| leucyl-tRNA synthetase [Helicobacter pullorum MIT 98-5489]
          Length = 812

 Score = 38.3 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 15/95 (15%), Positives = 27/95 (28%), Gaps = 11/95 (11%)

Query: 210 IDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADV 269
            DLG    +     L +  + T  G KM K+    +    +       +        AD 
Sbjct: 552 RDLGYTKISEPFLHLLTQGMVTKDGAKMSKSKGNVV----DPQEIIEQYG-------ADT 600

Query: 270 VSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
                     P+ E++             K++ A 
Sbjct: 601 ARLFILFAAPPVRELEWNDSALEGAFRFIKRLSAK 635


>gi|149374981|ref|ZP_01892754.1| tryptophanyl-tRNA synthetase [Marinobacter algicola DG893]
 gi|149360870|gb|EDM49321.1| tryptophanyl-tRNA synthetase [Marinobacter algicola DG893]
          Length = 404

 Score = 38.3 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 24/111 (21%), Positives = 39/111 (35%), Gaps = 26/111 (23%)

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
           + R + E  +  LE    +L+    + L          G  ++    I G   G+ +   
Sbjct: 204 KKRYQEEGDMEALETARALLKEQQNISL----------GDRERLYGYIEGG--GKVILPE 251

Query: 220 KLFALTSPLLT------TASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNI 264
                  PLLT         G KM K+ +  I L ++   P N  Q  R +
Sbjct: 252 PQ-----PLLTPESKMPGLDGQKMSKSYNNYIGLRED---PDNVSQKIRTM 294


>gi|114764466|ref|ZP_01443691.1| lysyl-tRNA synthetase [Pelagibaca bermudensis HTCC2601]
 gi|114543033|gb|EAU46052.1| lysyl-tRNA synthetase [Roseovarius sp. HTCC2601]
          Length = 525

 Score = 38.3 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 27/175 (15%), Positives = 52/175 (29%), Gaps = 20/175 (11%)

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            DF           +M G D   N      +   L        T  L     G K+ K+ 
Sbjct: 236 PDFGARWAALGVDFEMYGKDHSTNTPIYDGICRTLGVRAPEHFTYELFLDDQGQKISKSK 295

Query: 242 SGAIWLNKEMT------SPYNFWQY-------WRNIDDADVVSFAKRLTTLPMSEIDRMA 288
              + +++ +T        Y  +Q        W ++    V  + ++L   P  +     
Sbjct: 296 GNGLSIDEWLTYASTESLSYFMYQKPKTAKRLWWDVIPKAVDEYHQQLRAFPGQDAKAQL 355

Query: 289 -----KLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPT 338
                 + G ++ E+K ++   +   +     AE   T     F      +  P 
Sbjct: 356 NNPVWHIHGGDVPESKMVVPFSMLLNLASAAGAEDKETMWG--FIRRYAPEASPQ 408


>gi|325662260|ref|ZP_08150875.1| hypothetical protein HMPREF0490_01613 [Lachnospiraceae bacterium
           4_1_37FAA]
 gi|331086071|ref|ZP_08335154.1| hypothetical protein HMPREF0987_01457 [Lachnospiraceae bacterium
           9_1_43BFAA]
 gi|325471512|gb|EGC74733.1| hypothetical protein HMPREF0490_01613 [Lachnospiraceae bacterium
           4_1_37FAA]
 gi|330406994|gb|EGG86499.1| hypothetical protein HMPREF0987_01457 [Lachnospiraceae bacterium
           9_1_43BFAA]
          Length = 255

 Score = 38.3 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 13/77 (16%), Positives = 29/77 (37%), Gaps = 4/77 (5%)

Query: 338 TISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
            I    D     + L   + +AG   S  EA R ++S  + ++    +   +++      
Sbjct: 4   QIEREFDAPKESVRLNKFLSEAGVC-SRREADRLIESGRVTVDGRR-AEMGMRVTKDQEV 61

Query: 398 STGNIKLSFGKKNHIIC 414
             G   +   KK+ ++ 
Sbjct: 62  CVGKKVIQ--KKDRMVL 76


>gi|296391149|ref|ZP_06880624.1| tryptophanyl-tRNA synthetase [Pseudomonas aeruginosa PAb1]
          Length = 448

 Score = 38.3 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 33/221 (14%), Positives = 64/221 (28%), Gaps = 38/221 (17%)

Query: 166 EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-----TPK 220
           +  ++   ++Y +L A D +    +   ++ +G  DQ  ++    D+G+R         +
Sbjct: 126 DAGVTMGLYSYPVLMAADILMFNAH---KIPVG-RDQVQHVEMARDIGQRFNHLFGNGRE 181

Query: 221 LFAL-------TSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNID-------D 266
            F L           L    G KM K+    I L        +                D
Sbjct: 182 FFVLPEAVIEENVATLPGLDGRKMSKSYDNTIPLFSPSRQLKDAIARIVTDSRAPGEPKD 241

Query: 267 ADVVSFAKRLT-TLPMSEID--RMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAA 323
            D        +      ++   R   L G    EAK+ +   +        E  +A    
Sbjct: 242 PDSSHLFLLYSAFASAEQVAAFRQELLDGLAWGEAKQRLFQLL------DNELGEARERY 295

Query: 324 MECFDMSIHSQHMPTISISKDEVSRGMG---LLTLIVKAGF 361
                       +  I ++    +R +    +  L    G 
Sbjct: 296 QALIAK---PDDIEDILLAGAAKARRIATPFIAELREAVGL 333


>gi|107099976|ref|ZP_01363894.1| hypothetical protein PaerPA_01000997 [Pseudomonas aeruginosa PACS2]
 gi|254238899|ref|ZP_04932222.1| tryptophanyl-tRNA synthetase [Pseudomonas aeruginosa C3719]
 gi|126170830|gb|EAZ56341.1| tryptophanyl-tRNA synthetase [Pseudomonas aeruginosa C3719]
          Length = 448

 Score = 38.3 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 33/221 (14%), Positives = 64/221 (28%), Gaps = 38/221 (17%)

Query: 166 EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-----TPK 220
           +  ++   ++Y +L A D +    +   ++ +G  DQ  ++    D+G+R         +
Sbjct: 126 DAGVTMGLYSYPVLMAADILMFNAH---KIPVG-RDQVQHVEMARDIGQRFNHLFGNGRE 181

Query: 221 LFAL-------TSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNID-------D 266
            F L           L    G KM K+    I L        +                D
Sbjct: 182 FFVLPEAVIEENVATLPGLDGRKMSKSYDNTIPLFSPSRQLKDAIARIVTDSRAPGEPKD 241

Query: 267 ADVVSFAKRLT-TLPMSEID--RMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAA 323
            D        +      ++   R   L G    EAK+ +   +        E  +A    
Sbjct: 242 PDSSHLFLLYSAFASAEQVAAFRQELLDGLAWGEAKQRLFQLL------DNELGEARERY 295

Query: 324 MECFDMSIHSQHMPTISISKDEVSRGMG---LLTLIVKAGF 361
                       +  I ++    +R +    +  L    G 
Sbjct: 296 QALIAK---PDDIEDILLAGAAKARRIATPFIAELREAVGL 333


>gi|116052471|ref|YP_792784.1| tryptophanyl-tRNA synthetase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|313107023|ref|ZP_07793226.1| tryptophanyl-tRNA synthetase [Pseudomonas aeruginosa 39016]
 gi|115587692|gb|ABJ13707.1| tryptophanyl-tRNA synthetase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|310879728|gb|EFQ38322.1| tryptophanyl-tRNA synthetase [Pseudomonas aeruginosa 39016]
          Length = 448

 Score = 38.3 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 33/221 (14%), Positives = 64/221 (28%), Gaps = 38/221 (17%)

Query: 166 EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-----TPK 220
           +  ++   ++Y +L A D +    +   ++ +G  DQ  ++    D+G+R         +
Sbjct: 126 DAGVTMGLYSYPVLMAADILMFNAH---KIPVG-RDQVQHVEMARDIGQRFNHLFGNGRE 181

Query: 221 LFAL-------TSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNID-------D 266
            F L           L    G KM K+    I L        +                D
Sbjct: 182 FFVLPEAVIEENVATLPGLDGRKMSKSYDNTIPLFSPSRQLKDAIARIVTDSRAPGEPKD 241

Query: 267 ADVVSFAKRLT-TLPMSEID--RMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAA 323
            D        +      ++   R   L G    EAK+ +   +        E  +A    
Sbjct: 242 PDSSHLFLLYSAFASAEQVAAFRQELLDGLAWGEAKQRLFQLL------DNELGEARERY 295

Query: 324 MECFDMSIHSQHMPTISISKDEVSRGMG---LLTLIVKAGF 361
                       +  I ++    +R +    +  L    G 
Sbjct: 296 QALIAK---PDDIEDILLAGAAKARRIATPFIAELREAVGL 333


>gi|329956728|ref|ZP_08297301.1| ribosomal protein S4 [Bacteroides clarus YIT 12056]
 gi|328524100|gb|EGF51176.1| ribosomal protein S4 [Bacteroides clarus YIT 12056]
          Length = 201

 Score = 38.3 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 8/82 (9%), Positives = 28/82 (34%), Gaps = 3/82 (3%)

Query: 320 ATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKI 379
                  F+ +  ++ + T  +    +   +    ++ + G A +   AR+ +    I +
Sbjct: 65  EKQFRNLFEKAATAKGI-TGEVLLQLLEGRLD--NVVFRLGIAPTRAAARQLVSHKHITV 121

Query: 380 NNSIISNEKLQIKLQDFDSTGN 401
           +  +++     +K         
Sbjct: 122 DGEVVNVPSYAVKPGQVIGVRE 143


>gi|28211988|ref|NP_782932.1| putative ribosomal small subunit pseudouridine synthase A
           [Clostridium tetani E88]
 gi|28204431|gb|AAO36869.1| putative ribosomal small subunit pseudouridine synthase A
           [Clostridium tetani E88]
          Length = 238

 Score = 38.3 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 6/31 (19%), Positives = 17/31 (54%)

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
           S  E ++ +K+N +++N   + +  + I  +
Sbjct: 15  SRKEVKKLIKNNLVEVNGEKVKDPSINIDPE 45


>gi|312864688|ref|ZP_07724919.1| pseudouridine synthase B, ribosomal large subunit [Streptococcus
           downei F0415]
 gi|311099815|gb|EFQ58028.1| pseudouridine synthase B, ribosomal large subunit [Streptococcus
           downei F0415]
          Length = 241

 Score = 38.3 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 18/40 (45%), Gaps = 1/40 (2%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           I  AG A S  +A   +K   + IN  +++     +K  D
Sbjct: 7   IAHAGLA-SRRKAEELIKQGLVTINGQVVTELATTVKNGD 45


>gi|302510661|ref|XP_003017282.1| hypothetical protein ARB_04161 [Arthroderma benhamiae CBS 112371]
 gi|291180853|gb|EFE36637.1| hypothetical protein ARB_04161 [Arthroderma benhamiae CBS 112371]
          Length = 526

 Score = 38.3 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 8/35 (22%), Positives = 16/35 (45%)

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           FA+ST +AR+ +    + +N   +      +   D
Sbjct: 145 FASSTRQARQFVIHGGVTVNGKKMQYPGYLLNPGD 179


>gi|168185547|ref|ZP_02620182.1| leucyl-tRNA synthetase [Clostridium botulinum C str. Eklund]
 gi|169296223|gb|EDS78356.1| leucyl-tRNA synthetase [Clostridium botulinum C str. Eklund]
          Length = 812

 Score = 38.3 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 14/83 (16%), Positives = 31/83 (37%), Gaps = 16/83 (19%)

Query: 228 LLTTASGTKMGKTLSGAIWLNK-------EMTSPYNFWQYWRN----IDDADVVSFAKRL 276
           L+    G KM K+    I  +        ++   Y  + +  +      D  + S  K  
Sbjct: 564 LILGPDGFKMSKSKGNTIAPDDYIKEYGADVFRMYLMFGFAYSEGGAWSDDAIKSMGKF- 622

Query: 277 TTLPMSEIDRMAKLQGKEINEAK 299
               + +++R+     +E+N +K
Sbjct: 623 ----IDKVERILTDAREELNNSK 641


>gi|148263164|ref|YP_001229870.1| 30S ribosomal protein S4 [Geobacter uraniireducens Rf4]
 gi|189045382|sp|A5GAU5|RS4_GEOUR RecName: Full=30S ribosomal protein S4
 gi|146396664|gb|ABQ25297.1| SSU ribosomal protein S4P [Geobacter uraniireducens Rf4]
          Length = 208

 Score = 38.3 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 21/44 (47%)

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
           + GFA+S  EAR+ ++     +N   ++   +Q+K  D      
Sbjct: 106 RLGFASSRIEARQLVRHGHFTLNGRKVTIPSIQVKAGDVLELRE 149


>gi|260593255|ref|ZP_05858713.1| ribosomal large subunit pseudouridine synthase D [Prevotella
           veroralis F0319]
 gi|260534812|gb|EEX17429.1| ribosomal large subunit pseudouridine synthase D [Prevotella
           veroralis F0319]
          Length = 296

 Score = 38.3 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 14/65 (21%), Positives = 30/65 (46%), Gaps = 6/65 (9%)

Query: 346 VSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLS 405
           V     LL  ++ A  + S ++ +  L++  IK+N+  ++     ++  D      + +S
Sbjct: 17  VRDNAPLLEWLL-ANLSESKSKVKATLQNRGIKVNSKCVTQFDYPLRAGD-----KVSVS 70

Query: 406 FGKKN 410
             KKN
Sbjct: 71  KSKKN 75


>gi|229492232|ref|ZP_04386040.1| RNA-binding S4 domain protein [Rhodococcus erythropolis SK121]
 gi|229320858|gb|EEN86671.1| RNA-binding S4 domain protein [Rhodococcus erythropolis SK121]
          Length = 75

 Score = 38.3 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 13/68 (19%), Positives = 28/68 (41%), Gaps = 4/68 (5%)

Query: 333 SQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
           + ++P + I +DE+   + L   +  A    S  EA+  +    + +N  +      Q++
Sbjct: 2   TDNIPAVPI-RDEM---IRLGQFLKLANLIESGAEAKEVIADGMVSVNGEVEDRRGRQLR 57

Query: 393 LQDFDSTG 400
             D    G
Sbjct: 58  DGDVVEIG 65


>gi|170289928|ref|YP_001736744.1| tryptophanyl-tRNA synthetase [Candidatus Korarchaeum cryptofilum
           OPF8]
 gi|170174008|gb|ACB07061.1| tryptophanyl-tRNA synthetase [Candidatus Korarchaeum cryptofilum
           OPF8]
          Length = 390

 Score = 38.3 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 44/253 (17%), Positives = 71/253 (28%), Gaps = 33/253 (13%)

Query: 6   SDFLSILSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
             +L I   R F     +    L           Y G   +   +H GH+    +  W Q
Sbjct: 48  KSYLPIFLRRKFFFSHRDYDLVLKDYEEGRGFFLYTGRGPSGP-MHIGHIIPFYMTAWFQ 106

Query: 65  -KTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDA 123
            K        +      I  P F  E  +    Q I +               G      
Sbjct: 107 EKFDVNLYIQVTDDEKFIIHPEFEFEDTKRWALQNIFDIAA-----------VGFNPDKT 155

Query: 124 LMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ-AY 182
            +  N       K  ++   I    + +   +          +  + F    Y  +Q A 
Sbjct: 156 FIFQNSE---YTKIYEIAIPISKKITFST--ARAVFGFNESSKIGIIF----YPAIQAAP 206

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK---TPKLFALTSPLLTTASGTKMGK 239
            F    +   C +     DQ        D+ E L    T  +     P LT  SG KM  
Sbjct: 207 TF---FERRRCLIP-AAIDQDPYWRIQRDIAESLGYFKTAAIHGKFFPPLTGISG-KMSA 261

Query: 240 TLSG-AIWLNKEM 251
           ++   A++L  + 
Sbjct: 262 SMPETAVYLTDDP 274


>gi|325270275|ref|ZP_08136882.1| ribosomal large subunit pseudouridine synthase D [Prevotella
           multiformis DSM 16608]
 gi|324987576|gb|EGC19552.1| ribosomal large subunit pseudouridine synthase D [Prevotella
           multiformis DSM 16608]
          Length = 296

 Score = 38.3 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 14/65 (21%), Positives = 29/65 (44%), Gaps = 6/65 (9%)

Query: 346 VSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLS 405
           V+    LL  ++ A    S ++ +  L++  IK+N   ++     ++  D      + +S
Sbjct: 17  VAESAPLLEWLL-ANLKESRSKVKATLQNRGIKVNGKCVTQFDHPLQAGD-----KVSVS 70

Query: 406 FGKKN 410
             KKN
Sbjct: 71  KSKKN 75


>gi|319407896|emb|CBI81550.1| lysyl-tRNA synthetase [Bartonella schoenbuchensis R1]
          Length = 549

 Score = 38.3 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 13/83 (15%), Positives = 24/83 (28%), Gaps = 4/83 (4%)

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           D+    K      +M G D   ++     + + L           L     G K+ K+  
Sbjct: 250 DWAMRWKALGVDYEMAGKDLIDSVTLSSKICKVLDGNPPEGFNYELFLDDKGQKISKSKG 309

Query: 243 GAI----WLNKEMTSPYNFWQYW 261
             +    WL    T     + + 
Sbjct: 310 NGLTIDEWLTYAPTESLALYMFL 332


>gi|269215122|ref|ZP_06159051.1| S4 RNA-binding domain protein [Neisseria lactamica ATCC 23970]
 gi|269208236|gb|EEZ74691.1| S4 RNA-binding domain protein [Neisseria lactamica ATCC 23970]
          Length = 121

 Score = 38.3 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 10/53 (18%), Positives = 22/53 (41%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
           E +  + L  L+  AG A S  +A+  +    +  N    + +  +I+  +  
Sbjct: 52  EDNEYIALCDLLKLAGLAESGGQAKAFIAEGLVLRNGETETRKTAKIRGGEVI 104


>gi|241762377|ref|ZP_04760456.1| lysyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ATCC 10988]
 gi|241373064|gb|EER62713.1| lysyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ATCC 10988]
          Length = 525

 Score = 38.3 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 11/67 (16%), Positives = 21/67 (31%)

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           D+    K      +M G D   ++     +   L           +    +G K+ K+  
Sbjct: 239 DWAMRWKALGVDYEMAGKDLIDSVTQSSKITRVLGGRPPEGFNYEMFLDENGEKISKSKG 298

Query: 243 GAIWLNK 249
             I L +
Sbjct: 299 NGIGLEE 305


>gi|51245003|ref|YP_064887.1| 30S ribosomal protein S4 [Desulfotalea psychrophila LSv54]
 gi|61215518|sp|Q6AP44|RS4_DESPS RecName: Full=30S ribosomal protein S4
 gi|50876040|emb|CAG35880.1| probable 30S ribosomal protein S4 [Desulfotalea psychrophila LSv54]
          Length = 210

 Score = 38.3 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 15/82 (18%), Positives = 31/82 (37%), Gaps = 3/82 (3%)

Query: 320 ATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKI 379
                  F+ +   + +   ++    +     L   + +AGFA+S  +AR+ ++   I I
Sbjct: 72  EAQFRLTFEKAEAQKGVAGENL---LILLERRLDNAVFRAGFASSRTQARQIVRHKHILI 128

Query: 380 NNSIISNEKLQIKLQDFDSTGN 401
           N   +     Q+   D  S   
Sbjct: 129 NGKRVDIPSYQVSEGDVISLRE 150


>gi|25026702|ref|NP_736756.1| hypothetical protein CE0146 [Corynebacterium efficiens YS-314]
 gi|23491981|dbj|BAC16956.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
          Length = 118

 Score = 38.3 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 8/60 (13%), Positives = 21/60 (35%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
              + L   I  A   ++  EA+  + +  + +N  + +     ++  D    G+     
Sbjct: 32  DEAIKLGQFIKLANLVSTGGEAKDAIANGDVTVNGEVDTRRGRTLRNGDVVCIGDTCAQV 91


>gi|16801365|ref|NP_471633.1| tryptophanyl-tRNA synthetase [Listeria innocua Clip11262]
 gi|20178128|sp|Q929H5|SYW_LISIN RecName: Full=Tryptophanyl-tRNA synthetase; AltName:
           Full=Tryptophan--tRNA ligase; Short=TrpRS
 gi|16414813|emb|CAC97529.1| tryptophanyl-tRNA synthetase [Listeria innocua Clip11262]
          Length = 331

 Score = 38.3 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 36/222 (16%), Positives = 67/222 (30%), Gaps = 45/222 (20%)

Query: 143 EIGSFFSVNRMLSFES----------VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYD 192
           E+ +      +L               + +   +  +S     Y  L A D + L +   
Sbjct: 83  EVAAHAQAAWILQCNVYIGELERMTQFKDKSDGKAGVSAGLLTYPPLMAADIL-LYQTNL 141

Query: 193 CRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-----------TKMGKT- 240
             +   G DQ  +I    DL ER         T P +                 KM K+ 
Sbjct: 142 VPV---GEDQKQHIELTRDLAERFNKKHADIFTMPEVFIPKQGARVMSLQDPTKKMSKSD 198

Query: 241 --LSGAIWLNKEMTSPYNFWQYWRN-IDDAD------------VVSFAKRLTTLPMSEID 285
             L  AI+L   +  P    +  ++ + D+             V +     + +    I 
Sbjct: 199 ANLKNAIFL---LDPPATIRKKIKSAVTDSSGIIEYNKEEKPGVSNLLTIYSVITGETIA 255

Query: 286 RMAKL-QGKEINEAKKIIATEITTMVHGREEAEKAATAAMEC 326
            + +   GK   + K  +A  +   +   +E   A   + E 
Sbjct: 256 NIEEKYVGKGYGDFKTDLAELVVAELEQIQERYYAYLESEEL 297


>gi|94312131|ref|YP_585341.1| glutamyl-tRNA reductase [Cupriavidus metallidurans CH34]
 gi|93355983|gb|ABF10072.1| glutamyl tRNA reductase [Cupriavidus metallidurans CH34]
          Length = 450

 Score = 38.3 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 27/161 (16%), Positives = 58/161 (36%), Gaps = 24/161 (14%)

Query: 10  SILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL----FWLQK 65
             LSE+G   Q    ++L     +  +        TASSL       ++ L      +++
Sbjct: 246 EQLSEQGLTTQAIRLQDLGDRLHEFDIVVSC----TASSL------PIIGLGAVERAVKR 295

Query: 66  TGHKPISLMG-GGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             H+PI ++       +     R +   +    ++   + +   +  + +       D+ 
Sbjct: 296 RKHRPIMMVDLAVPRDVEPEVARLDDVFLYTVDDLGAVVREGNALRQAAVAQAEAIIDSR 355

Query: 125 MLNNETWLCSIKYIDLLREIGSF---------FSVNRMLSF 156
           +LN   WL +   + ++RE+ S              RML+ 
Sbjct: 356 VLNFMHWLETRSVVPVIRELQSQGEAIRQAEVERARRMLAR 396


>gi|283856353|ref|YP_162625.2| lysyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ZM4]
 gi|283775352|gb|AAV89514.2| lysyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ZM4]
          Length = 525

 Score = 38.3 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 11/67 (16%), Positives = 21/67 (31%)

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           D+    K      +M G D   ++     +   L           +    +G K+ K+  
Sbjct: 239 DWAMRWKALGVDYEMAGKDLIDSVTQSSKITRVLGGRPPEGFNYEMFLDENGEKISKSKG 298

Query: 243 GAIWLNK 249
             I L +
Sbjct: 299 NGIGLEE 305


>gi|283851224|ref|ZP_06368507.1| response regulator receiver protein [Desulfovibrio sp. FW1012B]
 gi|283573393|gb|EFC21370.1| response regulator receiver protein [Desulfovibrio sp. FW1012B]
          Length = 384

 Score = 38.3 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 19/123 (15%), Positives = 41/123 (33%), Gaps = 28/123 (22%)

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLI----- 356
           +A ++   +       KA     + FD +   Q     ++   E+  G  +L ++     
Sbjct: 222 VAAKLVANIPRMGGVAKAIAYQEKNFDGTGFPQD----AVRGKELPVGARILRVLLDFDR 277

Query: 357 -VKAGFATSTNEARRHLKSN-AIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
            V AG A    EA + +K    +        +  + +   +           GK  ++I 
Sbjct: 278 LVSAGAA--KAEAYKTIKQGAGLY-------DPDVVVAFGEVLGEE------GK--YVIV 320

Query: 415 HLC 417
            + 
Sbjct: 321 PVA 323


>gi|260752646|ref|YP_003225539.1| lysyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis NCIMB
           11163]
 gi|258552009|gb|ACV74955.1| lysyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis NCIMB
           11163]
          Length = 525

 Score = 38.3 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 11/67 (16%), Positives = 21/67 (31%)

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           D+    K      +M G D   ++     +   L           +    +G K+ K+  
Sbjct: 239 DWAMRWKALGVDYEMAGKDLIDSVTQSSKITRVLGGRPPEGFNYEMFLDENGEKISKSKG 298

Query: 243 GAIWLNK 249
             I L +
Sbjct: 299 NGIGLEE 305


>gi|162455676|ref|YP_001618043.1| hypothetical protein sce7394 [Sorangium cellulosum 'So ce 56']
 gi|161166258|emb|CAN97563.1| trpS [Sorangium cellulosum 'So ce 56']
          Length = 342

 Score = 38.3 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 20/93 (21%), Positives = 34/93 (36%), Gaps = 17/93 (18%)

Query: 166 EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALT 225
           +  ++   + Y +L A D + L K     +   G DQ  +I    D+ +R     ++  T
Sbjct: 137 DAGINMGLYGYPVLMAADIL-LFKTNVVPV---GKDQVQHIEIARDIAQRFN--AIYGPT 190

Query: 226 SPL-----------LTTASGTKMGKTLSGAIWL 247
             L           +    G KM K+    I L
Sbjct: 191 LVLPEARISAETAVIPGLDGRKMSKSYDNTIAL 223


>gi|325265440|ref|ZP_08132163.1| S4 domain protein [Clostridium sp. D5]
 gi|324029298|gb|EGB90590.1| S4 domain protein [Clostridium sp. D5]
          Length = 71

 Score = 38.3 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 17/42 (40%)

Query: 341 ISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNS 382
           I   E    + L   +  AG   S  EA+  ++   +K+N  
Sbjct: 4   IKLRESDEFIKLGQALKAAGLVDSGVEAKEVVQDGMVKVNGE 45


>gi|260886902|ref|ZP_05898165.1| ribosomal protein S4 [Selenomonas sputigena ATCC 35185]
 gi|330839300|ref|YP_004413880.1| ribosomal protein S4 [Selenomonas sputigena ATCC 35185]
 gi|260863501|gb|EEX78001.1| ribosomal protein S4 [Selenomonas sputigena ATCC 35185]
 gi|329747064|gb|AEC00421.1| ribosomal protein S4 [Selenomonas sputigena ATCC 35185]
          Length = 197

 Score = 38.3 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 9/65 (13%), Positives = 27/65 (41%)

Query: 331 IHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQ 390
             ++ MP ++           +  ++ + G A +  +AR+ +    I++N   +      
Sbjct: 68  EKAKTMPGVTGENLLGLLERRIDNVVYRLGLAQTRRQARQLVTHGHIRVNGKRLDIPSAL 127

Query: 391 IKLQD 395
           ++ +D
Sbjct: 128 VRAED 132


>gi|91083443|ref|XP_970123.1| PREDICTED: similar to tryptophanyl-tRNA synthetase [Tribolium
           castaneum]
          Length = 368

 Score = 38.3 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 35/265 (13%), Positives = 73/265 (27%), Gaps = 53/265 (20%)

Query: 35  VVTAYIGYDLTASSLHAGHLTQLMLL-FWLQKTGHKPISLMGGG--TSIIGDPSFRDESR 91
               + G   T   +H G+    +     LQ+     I  +      ++  DP       
Sbjct: 28  PRRIFSGIQPTGQ-IHLGNYLGAIAQWVKLQENNEDMILSIVDLHSITLPQDP------- 79

Query: 92  RMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVN 151
           + +    ++     +             ++      + +W            +G   ++ 
Sbjct: 80  KTLSKNILEMAATLLACGIDPSKVILFQQSMVPAHTHLSWC-----------LGCICTMP 128

Query: 152 RMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGID 211
           R+    + + +    + +    F Y +LQA D +     +   + +G  DQ  +I    D
Sbjct: 129 RLAHLPAYKEKSANLKDIPLGLFVYPVLQAADILAYKATH---VPVG-EDQAQHIQLTQD 184

Query: 212 LGERLKTPKLFALTSPLL----TTAS----------GTKMGKTLSGAIWLNKEMTSPYNF 257
           L         F  T P        +             KM K+       + +  S    
Sbjct: 185 LARMFNNR--FGETFPTPHCIFPGSDFARLRSLRDPAKKMSKS-------DPDPKSRIC- 234

Query: 258 WQYWRNIDDADVVSFAKRLTTLPMS 282
                +  D  V    K +T     
Sbjct: 235 ---LIDPPDEIVKKIKKSVTDFTSE 256


>gi|120554086|ref|YP_958437.1| tryptophanyl-tRNA synthetase [Marinobacter aquaeolei VT8]
 gi|120323935|gb|ABM18250.1| tryptophanyl-tRNA synthetase [Marinobacter aquaeolei VT8]
          Length = 404

 Score = 38.3 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 23/111 (20%), Positives = 38/111 (34%), Gaps = 26/111 (23%)

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
           + R + E     LE    +L+    + L          G  ++    I G   G+ +   
Sbjct: 204 KKRYQEEGDFEALETARALLKEQQNISL----------GDRERLYGFIEGG--GKVILPE 251

Query: 220 KLFALTSPLLT------TASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNI 264
                  PLLT         G KM K+ +  I L ++   P +  Q  R +
Sbjct: 252 PQ-----PLLTPESKMPGLDGQKMSKSYNNYIGLRED---PDSVAQKIRTM 294


>gi|332995248|gb|AEF05303.1| 30S ribosomal protein S4 [Alteromonas sp. SN2]
          Length = 206

 Score = 38.3 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 28/63 (44%), Gaps = 8/63 (12%)

Query: 347 SRGMGLLTLIVK--------AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
           + G  LL L+ K         GFA++  EAR+ +   AI +N  +++     +  +D  S
Sbjct: 85  NTGENLLQLLEKRLDNVVYRMGFASTRAEARQLVSHKAIMVNGQVVNIPSFNVSAEDVVS 144

Query: 399 TGN 401
              
Sbjct: 145 VRE 147


>gi|308051543|ref|YP_003915117.1| putative RNA-binding protein [Legionella longbeachae NSW150]
 gi|288859968|emb|CBJ13953.1| putative RNA-binding protein [Legionella longbeachae NSW150]
          Length = 72

 Score = 38.3 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 8/63 (12%), Positives = 22/63 (34%), Gaps = 2/63 (3%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINN--SIISNEKLQIKLQDFDSTGNIKL 404
              + L  ++   G  +S  EA+  + + ++ +N        +++             +L
Sbjct: 8   KEPVELFKILKFEGITSSGAEAKEMIAAGSVLVNGIIEKQKRKRMVAGDTIELKGEVFRL 67

Query: 405 SFG 407
             G
Sbjct: 68  KLG 70


>gi|284052184|ref|ZP_06382394.1| RNA-binding S4 domain-containing protein [Arthrospira platensis
           str. Paraca]
 gi|291568948|dbj|BAI91220.1| hypothetical protein [Arthrospira platensis NIES-39]
          Length = 72

 Score = 38.3 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 8/49 (16%), Positives = 22/49 (44%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
            + + L   + ++G   S  +A+  ++S  + +N  I +    ++   D
Sbjct: 7   EQNIKLDKFLKRSGLVQSGGQAKAFIQSGYVMVNGEIETRRGRKLIEGD 55


>gi|283798728|ref|ZP_06347881.1| tryptophan--tRNA ligase [Clostridium sp. M62/1]
 gi|291073409|gb|EFE10773.1| tryptophan--tRNA ligase [Clostridium sp. M62/1]
 gi|295090821|emb|CBK76928.1| tryptophanyl-tRNA synthetase [Clostridium cf. saccharolyticum K10]
          Length = 378

 Score = 38.3 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 45/316 (14%), Positives = 91/316 (28%), Gaps = 56/316 (17%)

Query: 22  SNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL----MGGG 77
           +  +        G  T + G   T + L  G+    +   W+  +           M   
Sbjct: 36  TRQKARRKHMLDGKKTLFSGMQATGN-LTLGNYLGALK-NWVTISDEYQTFFSVVDMHSI 93

Query: 78  TSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKY 137
           T        R  +R ++    I   ++  K               A +LN  T++  +  
Sbjct: 94  TVRQDPAELRKRARNLLTLY-IAAGLDPEKNCIYYQSHVSGHAELAWILNCFTYMGELNR 152

Query: 138 IDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQM 197
           +   ++  +  + N                 ++   F Y +L A D +     Y   +  
Sbjct: 153 MTQFKDKAAKHADN-----------------INAGLFTYPVLMAADILL----YQADVVP 191

Query: 198 GGSDQWGNIICGIDLGERLKTPKLFALTSP-LLTTASG----------TKMGKTLSGAIW 246
            G DQ  ++    D+  R         T P      +G           KM K+      
Sbjct: 192 VGIDQMQHLELTRDIAIRFNNIYGDVFTVPEAYIGKAGAKIMSLQDPAKKMSKSDENPNG 251

Query: 247 LNKEMTSPYNFWQYW-RNIDDAD--------------VVSFAKRLTTLPMSEIDRMAKLQ 291
               M  P    + + R + D++              ++   +  T     E++R  +  
Sbjct: 252 SIYLMDDPDTIIRKFKRAVTDSEACVRYCDEQPGIKNLIDIYRACTGKTPEEVER--EFD 309

Query: 292 GKEINEAKKIIATEIT 307
           GK   + K  +   + 
Sbjct: 310 GKGYGDFKMAVGEAVV 325


>gi|225386351|ref|ZP_03756115.1| hypothetical protein CLOSTASPAR_00095 [Clostridium asparagiforme
           DSM 15981]
 gi|225047533|gb|EEG57779.1| hypothetical protein CLOSTASPAR_00095 [Clostridium asparagiforme
           DSM 15981]
          Length = 69

 Score = 38.3 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 10/62 (16%), Positives = 23/62 (37%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
              + L   +  AG   S  EA+  ++   +K+N  + +    ++   D  +     +  
Sbjct: 8   DEYIKLGQALKAAGLVESGVEAKYAVEDGNVKVNGEVATQRGKKLVDGDVVAYKGETIKI 67

Query: 407 GK 408
            K
Sbjct: 68  VK 69


>gi|115671140|ref|XP_787967.2| PREDICTED: similar to tyrosyl-tRNA synthetase [Strongylocentrotus
           purpuratus]
 gi|115951639|ref|XP_001194179.1| PREDICTED: similar to tyrosyl-tRNA synthetase [Strongylocentrotus
           purpuratus]
          Length = 524

 Score = 38.3 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 42/234 (17%), Positives = 67/234 (28%), Gaps = 33/234 (14%)

Query: 11  ILSERGFIHQISNPRELDILCSQGV-VTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHK 69
            L  R    ++    +L+    +G  +  Y G   T    H  +   +  L    + G +
Sbjct: 12  DLITRNL-QEVLGRDKLESFLKEGKDIAVYWGTATTGKP-HIAYFVPMSKLADFLRAGCQ 69

Query: 70  PISLMGGGTSII---GDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALML 126
              L+      +     P    E R       I+  +E I       +++  G       
Sbjct: 70  VTILLADLHGYLDNMKAPWELLELRTKYYEHLIKAMLESIGVPIEK-LRFIRGTDYQ--- 125

Query: 127 NNETWLCSIKYIDLLREIGSFFSV-NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
                L     +D+ R          +    E V+   + +  L      Y  LQA D  
Sbjct: 126 -----LSKEYTLDVYRLSSVVTEHDAKKAGAEVVK---QVDHPL-LSGLLYPGLQALDEE 176

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK 239
            L        Q GG DQ            +L   K   L +P         MGK
Sbjct: 177 YLK----VDAQFGGVDQRKIFTFAEKYMPQLGYTKRIHLMNP---------MGK 217


>gi|297588221|ref|ZP_06946865.1| 30S ribosomal protein S4 [Finegoldia magna ATCC 53516]
 gi|297574910|gb|EFH93630.1| 30S ribosomal protein S4 [Finegoldia magna ATCC 53516]
          Length = 198

 Score = 38.3 bits (88), Expect = 2.7,   Method: Composition-based stats.
 Identities = 10/48 (20%), Positives = 21/48 (43%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
            L+++A FA+S  +AR+ +    I++N   +     Q+          
Sbjct: 94  NLVLRASFASSIRQARQMVSHGLIRVNGKKVDIPSYQVAEGSVIELKE 141


>gi|189424436|ref|YP_001951613.1| 30S ribosomal protein S4 [Geobacter lovleyi SZ]
 gi|226699069|sp|B3E856|RS4_GEOLS RecName: Full=30S ribosomal protein S4
 gi|189420695|gb|ACD95093.1| ribosomal protein S4 [Geobacter lovleyi SZ]
          Length = 208

 Score = 38.3 bits (88), Expect = 2.7,   Method: Composition-based stats.
 Identities = 17/65 (26%), Positives = 29/65 (44%), Gaps = 13/65 (20%)

Query: 349 GMGLLTLI--------VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG 400
           G  LL+L+         + GFA+S +EAR+ ++     +N    +   +Q+K  D     
Sbjct: 89  GENLLSLLERRLDNVVYRLGFASSRSEARQLVRHGHFVLNGRKATIPSIQVKAGD----- 143

Query: 401 NIKLS 405
            I L 
Sbjct: 144 TIVLR 148


>gi|325479054|gb|EGC82154.1| isoleucine--tRNA ligase [Anaerococcus prevotii ACS-065-V-Col13]
          Length = 1037

 Score = 38.3 bits (88), Expect = 2.7,   Method: Composition-based stats.
 Identities = 22/111 (19%), Positives = 35/111 (31%), Gaps = 17/111 (15%)

Query: 169 LSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQ---WGNIICGIDLGERLKTPKLFALT 225
           + F + +Y      DF      +       G DQ   W   +  I      K P    L 
Sbjct: 528 MPFAQLHYPFEHKDDFE---DYFPADFISEGIDQTRGWFYSLMAISTITTGKAPYKNVLV 584

Query: 226 SPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRL 276
           + L+   +G KM K+    +        P+  +  +     AD V F    
Sbjct: 585 NDLVVDKNGQKMSKSKGNTL-------DPFELFDKY----GADAVRFYSLY 624


>gi|298715272|emb|CBJ27921.1| Leucyl-tRNA Synthetase [Ectocarpus siliculosus]
          Length = 859

 Score = 38.3 bits (88), Expect = 2.7,   Method: Composition-based stats.
 Identities = 26/155 (16%), Positives = 45/155 (29%), Gaps = 28/155 (18%)

Query: 210 IDLGERLKTPKLFALTSPL-LTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDAD 268
            DLG          L     +    G KM K+    I  +              + D AD
Sbjct: 608 HDLGHVKDPEPFQRLVHQGMILGTDGEKMSKSRGNVINPDD-----------IVDSDGAD 656

Query: 269 VVSFAKRLTTLPMSEIDRMAKLQGKEI---NEAKKIIATEITTMVHGREEAEKAATAAME 325
            +   +     P+         Q   +    +    +A        G E+ E A      
Sbjct: 657 ALRLYEMF-MGPLEATKPWQTEQVAGVTRFRDRVYQLARR------GAEDVELAPET--- 706

Query: 326 CFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
              ++I  + M  +S   DE++    +  L+V   
Sbjct: 707 ---LTILHKTMKKVSEDIDELAFNTAISALMVLTN 738


>gi|257875811|ref|ZP_05655464.1| tryptophanyl-tRNA synthetase [Enterococcus casseliflavus EC20]
 gi|325570411|ref|ZP_08146188.1| tryptophan--tRNA ligase [Enterococcus casseliflavus ATCC 12755]
 gi|257809977|gb|EEV38797.1| tryptophanyl-tRNA synthetase [Enterococcus casseliflavus EC20]
 gi|325156621|gb|EGC68798.1| tryptophan--tRNA ligase [Enterococcus casseliflavus ATCC 12755]
          Length = 335

 Score = 38.3 bits (88), Expect = 2.7,   Method: Composition-based stats.
 Identities = 34/227 (14%), Positives = 62/227 (27%), Gaps = 40/227 (17%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTG--HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +      +    ++   ++    ++         +      +++  
Sbjct: 10  PTGK-LHLGHYVGSLKKRVEMQADPENQLYIMVADMQAL---------TDNAKTPEKVSA 59

Query: 102 NIEKIKGIFSSFIKY-----GTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSF 156
                  I    + Y        KT   + +    L  +    L     +    N  +  
Sbjct: 60  ------NILEVALDYLAVGLDPAKTTMFIQSQIPQLSELTMYYLNLVSVARVRRNPTVKA 113

Query: 157 ESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL 216
           E  + +        F  F Y + QA D      N    L   G DQ   +    ++    
Sbjct: 114 EIEQKKFGEGVPSGF--FIYPVSQAADITAFKAN----LVPVGEDQKPMLEQTQEIVHSF 167

Query: 217 KTPKLFALTSPL----------LTTASGT-KMGKTLSGAIWLNKEMT 252
            +     L  P           L    G  KM K+L+  I+L     
Sbjct: 168 NSTYSEVLVEPKAVLPPKGMGRLAGIDGNGKMSKSLNNGIYLADPAD 214


>gi|257866176|ref|ZP_05645829.1| tryptophanyl-tRNA synthetase [Enterococcus casseliflavus EC30]
 gi|257872507|ref|ZP_05652160.1| tryptophanyl-tRNA synthetase [Enterococcus casseliflavus EC10]
 gi|257800110|gb|EEV29162.1| tryptophanyl-tRNA synthetase [Enterococcus casseliflavus EC30]
 gi|257806671|gb|EEV35493.1| tryptophanyl-tRNA synthetase [Enterococcus casseliflavus EC10]
          Length = 335

 Score = 38.3 bits (88), Expect = 2.7,   Method: Composition-based stats.
 Identities = 34/227 (14%), Positives = 62/227 (27%), Gaps = 40/227 (17%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTG--HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +      +    ++   ++    ++         +      +++  
Sbjct: 10  PTGK-LHLGHYVGSLKKRVEMQADPENQLYIMVADMQAL---------TDNAKTPEKVSA 59

Query: 102 NIEKIKGIFSSFIKY-----GTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSF 156
                  I    + Y        KT   + +    L  +    L     +    N  +  
Sbjct: 60  ------NILEVALDYLAVGLDPAKTTMFIQSQIPQLSELTMYYLNLVSVARVRRNPTVKA 113

Query: 157 ESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL 216
           E  + +        F  F Y + QA D      N    L   G DQ   +    ++    
Sbjct: 114 EIEQKKFGEGVPSGF--FIYPVSQAADITAFKAN----LVPVGEDQKPMLEQTQEIVHSF 167

Query: 217 KTPKLFALTSPL----------LTTASGT-KMGKTLSGAIWLNKEMT 252
            +     L  P           L    G  KM K+L+  I+L     
Sbjct: 168 NSTYSEVLVEPKAVLPPKGMGRLAGIDGNGKMSKSLNNGIYLADPAD 214


>gi|329893623|ref|ZP_08269757.1| SSU ribosomal protein S4p (S9e) [gamma proteobacterium IMCC3088]
 gi|328923550|gb|EGG30862.1| SSU ribosomal protein S4p (S9e) [gamma proteobacterium IMCC3088]
          Length = 206

 Score = 38.3 bits (88), Expect = 2.7,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 29/63 (46%), Gaps = 8/63 (12%)

Query: 347 SRGMGLLTLI--------VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
           + G  LL L+         + GFA++  EAR+ +    + +N S+++    Q++  D  +
Sbjct: 85  ATGENLLQLLESRLDNVVYRMGFASTRAEARQLVSHKGVLVNGSVVNVPSYQVQPGDVVA 144

Query: 399 TGN 401
              
Sbjct: 145 VRE 147


>gi|302674230|ref|XP_003026800.1| hypothetical protein SCHCODRAFT_258801 [Schizophyllum commune H4-8]
 gi|300100484|gb|EFI91897.1| hypothetical protein SCHCODRAFT_258801 [Schizophyllum commune H4-8]
          Length = 335

 Score = 38.3 bits (88), Expect = 2.7,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 27/59 (45%), Gaps = 2/59 (3%)

Query: 337 PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           P  S+   +V R + +  LI ++  A S  EARR +    +K+N     N   ++   D
Sbjct: 122 PVTSLMFADVERRIDV--LIFRSCLAPSVYEARRLVVHGKVKLNGKQHQNANTRLAPGD 178


>gi|227827919|ref|YP_002829699.1| tryptophanyl-tRNA synthetase [Sulfolobus islandicus M.14.25]
 gi|227459715|gb|ACP38401.1| tryptophanyl-tRNA synthetase [Sulfolobus islandicus M.14.25]
          Length = 386

 Score = 38.3 bits (88), Expect = 2.7,   Method: Composition-based stats.
 Identities = 46/262 (17%), Positives = 80/262 (30%), Gaps = 35/262 (13%)

Query: 9   LSILSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSL--HAGHLTQLMLLFWLQK 65
           L ++  R       +    L+          Y G    A SL  H GHL   +   WLQ 
Sbjct: 51  LHVMLRRNVFFSHRDLELVLNDYEKGKGFFLYTG---RAPSLGMHIGHLIPFIFTKWLQD 107

Query: 66  TGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALM 125
             +  + +      I  D  F           + +             I  G       +
Sbjct: 108 KFNVNLYI-----EITDDEKFMRN--PEYTLDQTRSWA---YDNILDIIAVGFNADKTFI 157

Query: 126 LNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFV 185
             +  ++ ++  I +         + + L+F  VR+    + S +     Y  LQ     
Sbjct: 158 FQDTEYIRNMYPIAV--------KIAKKLTFSEVRATFGLDVSSNIGLIFYPALQ--IAP 207

Query: 186 ELAKNYDCRLQMGGSDQWGNIICGIDLGE---RLKTPKLFALTSPLLTTASGTKMGKTLS 242
            + +   C +  G  DQ        D+ E     K  ++ +   P LT   G KM  +  
Sbjct: 208 TMFEKKRCLIPAG-IDQDPYWRLQRDIAESLGYYKAAQIHSKFLPPLTGPEG-KMSSSNP 265

Query: 243 G-AIWLNKEMTSPYNFWQYWRN 263
             AI+L  +   P    +    
Sbjct: 266 ETAIYLVDD---PKTVERKIMK 284


>gi|118618582|ref|YP_906914.1| pseudouridylate synthase [Mycobacterium ulcerans Agy99]
 gi|183982541|ref|YP_001850832.1| pseudouridylate synthase [Mycobacterium marinum M]
 gi|118570692|gb|ABL05443.1| pseudouridylate synthase [Mycobacterium ulcerans Agy99]
 gi|183175867|gb|ACC40977.1| pseudouridylate synthase [Mycobacterium marinum M]
          Length = 253

 Score = 38.3 bits (88), Expect = 2.7,   Method: Composition-based stats.
 Identities = 9/53 (16%), Positives = 24/53 (45%), Gaps = 1/53 (1%)

Query: 342 SKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
              E  RG+ L  ++ +AG A S   A + +    ++++  +++    ++   
Sbjct: 5   EDFEQERGIRLQKVLSQAGIA-SRRAAEKLIIDGRVEVDGQVVTELGTRVDPD 56


>gi|15678279|ref|NP_275394.1| tryptophanyl-tRNA synthetase [Methanothermobacter
           thermautotrophicus str. Delta H]
 gi|3122904|sp|O26352|SYW_METTH RecName: Full=Tryptophanyl-tRNA synthetase; AltName:
           Full=Tryptophan--tRNA ligase; Short=TrpRS
 gi|2621301|gb|AAB84757.1| tryptophanyl-tRNA synthetase [Methanothermobacter
           thermautotrophicus str. Delta H]
          Length = 364

 Score = 38.3 bits (88), Expect = 2.7,   Method: Composition-based stats.
 Identities = 48/278 (17%), Positives = 86/278 (30%), Gaps = 46/278 (16%)

Query: 6   SDFLSI------LSERGFIHQISNPRELDILCSQGV-VTAYIGYDLTASSLHAGHLTQLM 58
           S+ L        L  RG I    +   +     +G       G   +   +H GH   + 
Sbjct: 25  SEVLDEVPEPSWLMRRGIIFGHRDYERIISAMKKGEDFAVVTGMMPSGR-MHIGHKMIVD 83

Query: 59  LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT 118
            L W  + G +    +    +        ++SRR+          E I G  +  +    
Sbjct: 84  QLRWYDRMGAEIFIPIADMEAYSARGVDFEDSRRI-------AIEEYIAGYIALGLDLEK 136

Query: 119 GKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMI 178
                 + +      ++   DL   +    + N + +            S S       I
Sbjct: 137 DNIHVYLQS-----ENLMVEDLAYVLAGKVNFNELRAIYGFTG------STSMAHMYAPI 185

Query: 179 LQAYDFVE--LAKNYD---CRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPL----L 229
           +Q  D +   L +        + +G  DQ  +I    D+  R +    F L S      +
Sbjct: 186 IQVSDILHPQLDELGGPRPVIVPVG-PDQDPHIRLTRDIAARFRDRYGFILPSSTYHRFM 244

Query: 230 TTASGTKMG----KTLSGAIWLNKEMTSPYNFWQYWRN 263
              +G KM     K+   AI+L+    +P       RN
Sbjct: 245 GGLTGGKMSSNRPKS---AIFLS---DTPEEAEAKIRN 276


>gi|117924345|ref|YP_864962.1| ribosomal large subunit pseudouridine synthase B [Magnetococcus sp.
           MC-1]
 gi|117608101|gb|ABK43556.1| ribosomal large subunit pseudouridine synthase B [Magnetococcus sp.
           MC-1]
          Length = 332

 Score = 38.3 bits (88), Expect = 2.7,   Method: Composition-based stats.
 Identities = 7/50 (14%), Positives = 20/50 (40%), Gaps = 1/50 (2%)

Query: 346 VSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           +     L   + + G   S  E    ++   + IN  +++   +++  +D
Sbjct: 66  IGEAPRLQKWLAEQGLC-SRREGEVWIQEGRVSINGEVVTELGVKVAKRD 114


>gi|307243492|ref|ZP_07525643.1| tryptophan--tRNA ligase [Peptostreptococcus stomatis DSM 17678]
 gi|306493136|gb|EFM65138.1| tryptophan--tRNA ligase [Peptostreptococcus stomatis DSM 17678]
          Length = 335

 Score = 37.9 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 55/308 (17%), Positives = 94/308 (30%), Gaps = 54/308 (17%)

Query: 32  SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESR 91
             G    + G   +   +  G+    +   W +                I  P   +  R
Sbjct: 3   ENGKKVIFSGVQPSGK-MTLGNYLGALK-SWTKLQDEYECFFSMVNMHAITVPQDPEVLR 60

Query: 92  RMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETW-LCSIKYIDLLREIGSFFSV 150
           R       Q     I    ++          A +    +W LC++ Y+  L         
Sbjct: 61  RQTIELLAQFIACGIDPDLNTIFIQSHVHEHAEL----SWALCTLTYMGEL--------- 107

Query: 151 NRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGI 210
           NRM  ++  +SR K EQ+L+   F Y +L A D +     Y   L   G DQ  ++    
Sbjct: 108 NRMTQYKD-KSR-KSEQNLNAGLFTYPVLMAADILL----YQTDLVPVGDDQKQHMELAR 161

Query: 211 DLGERLKTPKLFALTSPLLTT-------------ASGTKMGKTLSGA---IWLNKEMTSP 254
           DL  R      F  T  +                    KM K+ +     I L ++  S 
Sbjct: 162 DLATRFNNR--FGDTFIVPEGYYPKETARVMSLQEPEKKMSKSDANPSAFILLAEDADST 219

Query: 255 YNFWQY-------WRNIDDA-----DVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKII 302
               +            +D      ++++    +T   + EI  M    GK     K  +
Sbjct: 220 AKKIKKAVTDSIGIVKYNDEQPGLKNLINIYSAMTDKSVEEIVAMY--DGKGYGAFKGEM 277

Query: 303 ATEITTMV 310
           A  +   +
Sbjct: 278 AEAVVEHL 285


>gi|258513667|ref|YP_003189889.1| 30S ribosomal protein S4 [Desulfotomaculum acetoxidans DSM 771]
 gi|257777372|gb|ACV61266.1| ribosomal protein S4 [Desulfotomaculum acetoxidans DSM 771]
          Length = 208

 Score = 37.9 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 21/125 (16%), Positives = 37/125 (29%), Gaps = 30/125 (24%)

Query: 285 DRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKD 344
            R     G ++ E +K+        ++G  E           FD +   Q +        
Sbjct: 47  RRKVSEYGTQLREKQKV------RRIYGVLE-----KQFRTYFDRADRQQGI-------- 87

Query: 345 EVSRGMGLLTLI--------VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
               G  LL L+         + G   S  EAR+ +      +N   +      +K+ D 
Sbjct: 88  ---TGENLLRLLERRMDNVIFRMGLGASRVEARQLVTHGHFTVNGRKVDIPSFLVKVGDV 144

Query: 397 DSTGN 401
                
Sbjct: 145 IGIRE 149


>gi|217074322|gb|ACJ85521.1| unknown [Medicago truncatula]
          Length = 325

 Score = 37.9 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 29/70 (41%), Gaps = 6/70 (8%)

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS-TGNIKLSFG---- 407
           +  +  AGF  S ++    + +  ++IN   I+ +   +K  D  S +G  +L  G    
Sbjct: 252 VDAVASAGFKISRSKLVDMISNGDVRINWIPITTKGTTVKSGDLVSVSGLGRLKIGEVNT 311

Query: 408 -KKNHIICHL 416
            KK      L
Sbjct: 312 TKKGKFAVEL 321


>gi|158321221|ref|YP_001513728.1| isoleucyl-tRNA synthetase [Alkaliphilus oremlandii OhILAs]
 gi|158141420|gb|ABW19732.1| isoleucyl-tRNA synthetase [Alkaliphilus oremlandii OhILAs]
          Length = 1032

 Score = 37.9 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 21/112 (18%), Positives = 38/112 (33%), Gaps = 19/112 (16%)

Query: 169 LSFLEFNYMILQAYDFVELA-KNYDCRLQMGGSDQ---WGNIICGIDLGERLKTPKLFAL 224
           + F + +Y      +F EL   ++ C     G DQ   W   +  I       +P    L
Sbjct: 522 MPFAQHHYPFENKENFNELFPADFICE----GIDQTRGWFYSLIAISTFVMGVSPYKNVL 577

Query: 225 TSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRL 276
            + L+    G KM K+    +        P+  +  +     AD + +    
Sbjct: 578 VNDLILDKEGRKMSKSRGNTV-------DPFELFDKY----GADALRWYLLF 618


>gi|300312941|ref|YP_003777033.1| hypothetical protein Hsero_3647 [Herbaspirillum seropedicae SmR1]
 gi|300075726|gb|ADJ65125.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1]
          Length = 73

 Score = 37.9 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 7/51 (13%), Positives = 21/51 (41%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
            L+   G   S    ++ +    ++++    S +  +I      S G++++
Sbjct: 18  QLLKLCGLCDSGGAGKQLVAEGHVRVDGKPESRKTCKITAGQKVSLGDVQI 68


>gi|260576404|ref|ZP_05844394.1| lysyl-tRNA synthetase [Rhodobacter sp. SW2]
 gi|259021287|gb|EEW24593.1| lysyl-tRNA synthetase [Rhodobacter sp. SW2]
          Length = 528

 Score = 37.9 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 19/84 (22%), Positives = 28/84 (33%), Gaps = 4/84 (4%)

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            DF       D   +M G D   N      + E L   K    T  L    +G K+ K+ 
Sbjct: 236 PDFGARWAALDVDFEMYGKDHSTNTPIYDGICEILGGRKPEHFTYELFLDETGQKISKSK 295

Query: 242 SGAI----WLNKEMTSPYNFWQYW 261
              +    WL    T   +++ Y 
Sbjct: 296 GNGLTIDEWLTYAATESLSYFMYL 319


>gi|298346749|ref|YP_003719436.1| pseudouridylate synthase [Mobiluncus curtisii ATCC 43063]
 gi|304389546|ref|ZP_07371509.1| ribosomal large subunit pseudouridine synthase B [Mobiluncus
           curtisii subsp. curtisii ATCC 35241]
 gi|298236810|gb|ADI67942.1| pseudouridylate synthase [Mobiluncus curtisii ATCC 43063]
 gi|304327356|gb|EFL94591.1| ribosomal large subunit pseudouridine synthase B [Mobiluncus
           curtisii subsp. curtisii ATCC 35241]
          Length = 278

 Score = 37.9 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 12/87 (13%), Positives = 30/87 (34%), Gaps = 7/87 (8%)

Query: 317 EKAATAAMECFDMSIHSQHMPTISIS------KDEVSRGMGLLTLIVKAGFATSTNEARR 370
           +KA        + ++ S + P   +        +  S    L  ++ +AG   S   +  
Sbjct: 3   QKAEKMTENETENTVTSDNPPLPELDTTPQSRPESTSEPERLQKVLSRAG-VASRRASED 61

Query: 371 HLKSNAIKINNSIISNEKLQIKLQDFD 397
            +    ++IN   +    +++   D  
Sbjct: 62  LIARGRVQINGETVREMGVKVLPTDRI 88


>gi|221632952|ref|YP_002522175.1| 30S ribosomal protein S4 [Thermomicrobium roseum DSM 5159]
 gi|254764619|sp|B9KZW1|RS4_THERP RecName: Full=30S ribosomal protein S4
 gi|221156886|gb|ACM06013.1| ribosomal protein S4 [Thermomicrobium roseum DSM 5159]
          Length = 217

 Score = 37.9 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 20/119 (16%), Positives = 41/119 (34%), Gaps = 14/119 (11%)

Query: 280 PMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI 339
           P     R       ++ E +K+        V+G  E           FD +     +   
Sbjct: 49  PTQRAARRPSEFALQLREKQKL------KRVYGILE-----RQFRRHFDEAERRPGLTGD 97

Query: 340 SISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
           ++ +   SR   ++    + GFA S  +AR+ ++     +N         Q++  D  +
Sbjct: 98  NLLQILESRLDNVVY---RLGFADSRRQARQLVRHGHFLVNGRKTDIPSYQVRPGDIIA 153


>gi|91775491|ref|YP_545247.1| tryptophanyl-tRNA synthetase II [Methylobacillus flagellatus KT]
 gi|91709478|gb|ABE49406.1| tryptophanyl-tRNA synthetase [Methylobacillus flagellatus KT]
          Length = 339

 Score = 37.9 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 37/226 (16%), Positives = 64/226 (28%), Gaps = 34/226 (15%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
            T   LH GH    +      +  +K   ++    ++  +    D+  R +    +    
Sbjct: 13  PTGP-LHLGHYVGSLRNRVHYQHEYKQYIMLADAQALTDNMDDIDKVHRNVIEVALDYLA 71

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSR- 162
             I    S+            +      L ++  ++                 E +R R 
Sbjct: 72  VGIDPKLSTIFIQSQVPELTELAFYYLNLVTVARLE-----------RNPTVKEEIRLRN 120

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK----- 217
            +R+    FL   Y + QA D       +   L   G DQ   I    ++  R       
Sbjct: 121 FERDIPAGFL--TYPVSQAADITA----FKATLVPVGEDQIPMIEQTNEIVRRFNRLYKH 174

Query: 218 ---TPKLFALTSPL------LTTASGT-KMGKTLSGAIWLNKEMTS 253
                ++   T  L      L    G  KM K+L   I L      
Sbjct: 175 PVTKQEILVETKALVPEIGRLPGIDGKAKMSKSLGNVINLGASADE 220


>gi|237653971|ref|YP_002890285.1| 30S ribosomal protein S4 [Thauera sp. MZ1T]
 gi|237625218|gb|ACR01908.1| ribosomal protein S4 [Thauera sp. MZ1T]
          Length = 209

 Score = 37.9 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 24/55 (43%), Gaps = 8/55 (14%)

Query: 349 GMGLLTLI--------VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           G  LL L+         + GF  S  EAR+ ++ N + +N   ++     ++  D
Sbjct: 90  GENLLQLLEGRLDAVAYRMGFGASRAEARQVVRHNGVLVNGKRVNIPSYVVRPGD 144


>gi|220912302|ref|YP_002487611.1| pseudouridine synthase [Arthrobacter chlorophenolicus A6]
 gi|219859180|gb|ACL39522.1| pseudouridine synthase [Arthrobacter chlorophenolicus A6]
          Length = 403

 Score = 37.9 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 12/91 (13%), Positives = 33/91 (36%), Gaps = 9/91 (9%)

Query: 312 GREEAEKAATAAMECFDMSIHS------QHMPTISISKDEV--SRGMGLLTLIVKAGFAT 363
           G   A  +     E F  ++        +  P   + + E+  + G+ L  ++  AG   
Sbjct: 117 GAPGAAASRAFGSERFGQNLGPVRKPGRKKRPRTDVPQSELHDADGVRLQKVMASAG-VA 175

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
           S       +    ++++  +++   ++I   
Sbjct: 176 SRRVCEEMIAEGRVEVDGQVVTELGVRIDPA 206


>gi|189043064|sp|Q1LIF4|HEM1_RALME RecName: Full=Glutamyl-tRNA reductase; Short=GluTR
          Length = 434

 Score = 37.9 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 27/161 (16%), Positives = 58/161 (36%), Gaps = 24/161 (14%)

Query: 10  SILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL----FWLQK 65
             LSE+G   Q    ++L     +  +        TASSL       ++ L      +++
Sbjct: 230 EQLSEQGLTTQAIRLQDLGDRLHEFDIVVSC----TASSL------PIIGLGAVERAVKR 279

Query: 66  TGHKPISLMG-GGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             H+PI ++       +     R +   +    ++   + +   +  + +       D+ 
Sbjct: 280 RKHRPIMMVDLAVPRDVEPEVARLDDVFLYTVDDLGAVVREGNALRQAAVAQAEAIIDSR 339

Query: 125 MLNNETWLCSIKYIDLLREIGSF---------FSVNRMLSF 156
           +LN   WL +   + ++RE+ S              RML+ 
Sbjct: 340 VLNFMHWLETRSVVPVIRELQSQGEAIRQAEVERARRMLAR 380


>gi|20808026|ref|NP_623197.1| hypothetical protein TTE1597 [Thermoanaerobacter tengcongensis MB4]
 gi|20516604|gb|AAM24801.1| conserved hypothetical protein [Thermoanaerobacter tengcongensis
           MB4]
          Length = 248

 Score = 37.9 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 18/71 (25%), Positives = 30/71 (42%), Gaps = 7/71 (9%)

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDST---GNIKLS--FG 407
           +  +  +GF  S  +A   +KS  +++N   + +    +   D  S    G IKL    G
Sbjct: 174 VDSVAASGFGISRTKASELIKSGLLRVNWEAVEDPSFHVGEGDVISLRGFGRIKLQEIKG 233

Query: 408 --KKNHIICHL 416
             KK  I  H+
Sbjct: 234 NTKKGRISIHI 244


>gi|77361711|ref|YP_341286.1| 30S ribosomal protein S4 [Pseudoalteromonas haloplanktis TAC125]
 gi|90101708|sp|Q3IJJ5|RS4_PSEHT RecName: Full=30S ribosomal protein S4
 gi|76876622|emb|CAI87844.1| 30S ribosomal subunit protein S4 [Pseudoalteromonas haloplanktis
           TAC125]
          Length = 206

 Score = 37.9 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 30/64 (46%), Gaps = 8/64 (12%)

Query: 340 SISKDEVSRGMGLLTLIVK--------AGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
             ++ + + G  LL L+ +         GFA++  EAR+ +   AI +N  +++     I
Sbjct: 78  EAARLKGNTGENLLQLLEQRLDNVVYRMGFASTRAEARQLVSHKAILVNGRVVNVPSYVI 137

Query: 392 KLQD 395
             +D
Sbjct: 138 APED 141


>gi|54302077|ref|YP_132070.1| tryptophanyl-tRNA synthetase II [Photobacterium profundum SS9]
 gi|46915498|emb|CAG22270.1| putative tryptophanyl-tRNA synthetase [Photobacterium profundum
           SS9]
          Length = 339

 Score = 37.9 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 39/219 (17%), Positives = 69/219 (31%), Gaps = 35/219 (15%)

Query: 45  TASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMR-SQEIQENI 103
           T   LH GHL   +    L +  +    L+     +       D      + S  I   +
Sbjct: 19  TGP-LHLGHLVGSLQQRVLLQEQYDQTVLVADLQGL------TDNGHNPQKVSSNILNVV 71

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL 163
                +          KT   + +    L  +          +  S++R+    +V++ +
Sbjct: 72  ADYLAVG-----INPSKTTICLQSAIPALSELTMY-----YSNLVSISRLERNPTVKNEI 121

Query: 164 KR---EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK--- 217
           K     +S+      Y I QA D       +   L   G DQ   +    ++  RL    
Sbjct: 122 KSKEFGRSIPAGFLTYPISQAADITA----FKATLVPVGEDQLPMLEQTNEIVRRLNHIA 177

Query: 218 TPKLFALTSPLLTT------ASGT-KMGKTLSGAIWLNK 249
             ++      LL+       A G  KM K++   I L  
Sbjct: 178 QREVLVECKALLSKVSRLPSADGKSKMSKSMGNTIMLGS 216


>gi|294495900|ref|YP_003542393.1| 30S ribosomal protein S4P [Methanohalophilus mahii DSM 5219]
 gi|292666899|gb|ADE36748.1| SSU ribosomal protein S4P [Methanohalophilus mahii DSM 5219]
          Length = 184

 Score = 37.9 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 20/101 (19%), Positives = 44/101 (43%), Gaps = 3/101 (2%)

Query: 297 EAKKIIATEITTMV--HGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLT 354
           +A++++A      +  H + EA++   + +  + M      +  I     EV     L T
Sbjct: 54  DARRLLADSAEAELTGHAKTEADQ-ILSRLIRYSMIKGDAEIDDILALNTEVILERRLQT 112

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           L+ + G A +  +AR+ +    I I+   ++   + +  QD
Sbjct: 113 LVHRLGLARTPKQARQFITHGHIAIDGKKLTVPGMLVSKQD 153


>gi|225873051|ref|YP_002754510.1| ribosomal protein S4 [Acidobacterium capsulatum ATCC 51196]
 gi|254764560|sp|C1F615|RS4_ACIC5 RecName: Full=30S ribosomal protein S4
 gi|225792033|gb|ACO32123.1| ribosomal protein S4 [Acidobacterium capsulatum ATCC 51196]
          Length = 209

 Score = 37.9 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 13/48 (27%), Positives = 26/48 (54%), Gaps = 5/48 (10%)

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLS 405
           + GFATS  +AR+ ++   +++N   ++    Q+K+ D      IK+ 
Sbjct: 107 RLGFATSRRQARQIVRHGHVEVNGRKVNIPSFQVKVGD-----EIKIR 149


>gi|194017389|ref|ZP_03056001.1| ribosomal protein S4 [Bacillus pumilus ATCC 7061]
 gi|194011257|gb|EDW20827.1| ribosomal protein S4 [Bacillus pumilus ATCC 7061]
          Length = 200

 Score = 37.9 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 12/82 (14%), Positives = 26/82 (31%), Gaps = 3/82 (3%)

Query: 320 ATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKI 379
                  FD    +  +P        +     L  L+ + G A +  +AR+ +    I +
Sbjct: 65  ERQFRTLFDK---ADKLPGKQGENFMILLETRLDNLVYRLGLARTRRQARQLVNHGHILV 121

Query: 380 NNSIISNEKLQIKLQDFDSTGN 401
           + S +      +K     +   
Sbjct: 122 DGSRVDIPSFSVKPGQTIALRE 143


>gi|116254343|ref|YP_770181.1| heat shock protein 15 [Rhizobium leguminosarum bv. viciae 3841]
 gi|115258991|emb|CAK10100.1| putative heat shock protein 15 [Rhizobium leguminosarum bv. viciae
           3841]
          Length = 134

 Score = 37.9 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 14/71 (19%), Positives = 26/71 (36%), Gaps = 12/71 (16%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF----DSTGNIKLSFG 407
           +   +  A  A S + A+ H++S  ++IN    S     +K  D         ++ L   
Sbjct: 15  IDKWLFFARMAKSRSVAQSHIQSGHVRINGERCSYPSQMVKPGDRIELTLERRDVVL--- 71

Query: 408 KKNHIICHLCG 418
                +  L G
Sbjct: 72  -----VVRLAG 77


>gi|148262069|ref|YP_001236196.1| RNA-binding S4 domain-containing protein [Acidiphilium cryptum
           JF-5]
 gi|326405581|ref|YP_004285663.1| RNA-binding protein [Acidiphilium multivorum AIU301]
 gi|146403750|gb|ABQ32277.1| heat shock protein Hsp15 [Acidiphilium cryptum JF-5]
 gi|325052443|dbj|BAJ82781.1| RNA-binding protein [Acidiphilium multivorum AIU301]
          Length = 98

 Score = 37.9 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 13/62 (20%), Positives = 23/62 (37%)

Query: 336 MPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           MP    S  E +    L   +  A F  +   A R + +  ++IN  I      +++  D
Sbjct: 1   MPPPEPSGGEDAAWQRLDKFLFHARFVKTRGVAARLVAAGGVRINRQITEKPHARLRPGD 60

Query: 396 FD 397
             
Sbjct: 61  VL 62


>gi|222056371|ref|YP_002538733.1| pseudouridine synthase [Geobacter sp. FRC-32]
 gi|221565660|gb|ACM21632.1| pseudouridine synthase [Geobacter sp. FRC-32]
          Length = 240

 Score = 37.9 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 11/66 (16%), Positives = 28/66 (42%), Gaps = 3/66 (4%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISN--EKLQIKLQDFDSTGNIKLSFGKK 409
           L  ++ +AG A S  EA + + +  + +N  +++    K   +       G       +K
Sbjct: 5   LQKILSQAGIA-SRREAEKIITAGRVAVNGQVVTELGSKADAESDRITLDGKPIRQESRK 63

Query: 410 NHIICH 415
            +++ +
Sbjct: 64  RYLLLY 69


>gi|94968282|ref|YP_590330.1| SSU ribosomal protein S4P [Candidatus Koribacter versatilis
           Ellin345]
 gi|152060923|sp|Q1IS94|RS4_ACIBL RecName: Full=30S ribosomal protein S4
 gi|94550332|gb|ABF40256.1| SSU ribosomal protein S4P [Candidatus Koribacter versatilis
           Ellin345]
          Length = 209

 Score = 37.9 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 13/82 (15%), Positives = 36/82 (43%), Gaps = 3/82 (3%)

Query: 320 ATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKI 379
                  F+ +   Q + T  +   ++ R +    ++ + GFA++  +AR+ ++   I +
Sbjct: 72  ENQFRNYFEKAAKGQGV-TGEMLLQQLERRLD--NVVYRLGFASARRQARQLVRHGHIAV 128

Query: 380 NNSIISNEKLQIKLQDFDSTGN 401
           N   ++    Q+ ++D  +   
Sbjct: 129 NGKKVNIPSYQVSVKDEIAVRE 150


>gi|296314594|ref|ZP_06864535.1| S4 RNA-binding domain protein [Neisseria polysaccharea ATCC 43768]
 gi|296838633|gb|EFH22571.1| S4 RNA-binding domain protein [Neisseria polysaccharea ATCC 43768]
          Length = 77

 Score = 37.9 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 10/53 (18%), Positives = 22/53 (41%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
           E +  + L  L+  AG A S  +A+  +    +  N    + +  +I+  +  
Sbjct: 8   EDNEYIALCDLLKLAGLAESGGQAKAFIAEGLVLRNGETETRKTAKIRGGEII 60


>gi|315283294|ref|ZP_07871515.1| tryptophan--tRNA ligase [Listeria marthii FSL S4-120]
 gi|313613056|gb|EFR86977.1| tryptophan--tRNA ligase [Listeria marthii FSL S4-120]
          Length = 331

 Score = 37.9 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 34/204 (16%), Positives = 60/204 (29%), Gaps = 45/204 (22%)

Query: 143 EIGSFFSVNRMLSFES----------VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYD 192
           E+ +      +L               + +   +  +S     Y  L A D +     Y 
Sbjct: 83  EVAAHAQAAWILQCNVYIGELERMTQFKDKSDGKAGVSAGLLTYPPLMAADILL----YQ 138

Query: 193 CRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-----------TKMGKT- 240
             L   G DQ  +I    DL ER         T P +                 KM K+ 
Sbjct: 139 TDLVPVGEDQKQHIELTRDLAERFNKKHADIFTMPEVFIPKQGARVMSLQDPTKKMSKSD 198

Query: 241 --LSGAIWLNKEMTSPYNFWQYWRN-IDDAD------------VVSFAKRLTTLPMSEID 285
             L  AI+L   +  P    +  ++ + D+             V +     + +    I 
Sbjct: 199 ANLKNAIFL---LDPPATIRKKIKSAVTDSSGIIEYNKEEKPGVSNLLTIYSVITGETIA 255

Query: 286 RMAKL-QGKEINEAKKIIATEITT 308
            + +   GK   + K  +A  +  
Sbjct: 256 SIEEKYVGKGYGDFKTDLAELVVA 279


>gi|302869943|ref|YP_003838580.1| 30S ribosomal protein S4 [Micromonospora aurantiaca ATCC 27029]
 gi|315501404|ref|YP_004080291.1| ribosomal protein s4 [Micromonospora sp. L5]
 gi|302572802|gb|ADL49004.1| ribosomal protein S4 [Micromonospora aurantiaca ATCC 27029]
 gi|315408023|gb|ADU06140.1| ribosomal protein S4 [Micromonospora sp. L5]
          Length = 208

 Score = 37.9 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 25/61 (40%), Gaps = 8/61 (13%)

Query: 345 EVSRGMGLLTLI--------VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
           E   G  LL ++         +AG+A S + AR+ +K     +N   +     ++K  D 
Sbjct: 85  EAKTGEVLLQILESRLDNVVYRAGYAKSRDMARQLVKHGHFTVNGKKVDIPSYRVKEHDI 144

Query: 397 D 397
            
Sbjct: 145 I 145


>gi|268316878|ref|YP_003290597.1| RNA-binding S4 domain-containing protein [Rhodothermus marinus DSM
           4252]
 gi|262334412|gb|ACY48209.1| RNA-binding S4 domain protein [Rhodothermus marinus DSM 4252]
          Length = 268

 Score = 37.9 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 7/49 (14%), Positives = 22/49 (44%), Gaps = 1/49 (2%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           + +AG   S  +A   + S  +++N   ++   +++   D      +++
Sbjct: 16  LARAGVCPSRRKADELIASGQVRVNGQ-VAQLGMRVGPDDIVEVNGVRV 63


>gi|118384383|ref|XP_001025340.1| hypothetical protein TTHERM_01287980 [Tetrahymena thermophila]
 gi|89307107|gb|EAS05095.1| hypothetical protein TTHERM_01287980 [Tetrahymena thermophila
           SB210]
          Length = 420

 Score = 37.9 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 17/74 (22%), Positives = 33/74 (44%), Gaps = 5/74 (6%)

Query: 51  AGHLT-QLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGI 109
            G++   +M L   Q  G   I L+G      G+P  +DE + +++ + +   I ++   
Sbjct: 121 LGNIVNPIMSLAHRQVYGIPMILLIGWR----GEPGKKDEPQHLVQGKTMNGLITEMGIQ 176

Query: 110 FSSFIKYGTGKTDA 123
           F     +  G T+A
Sbjct: 177 FEVLPDFIEGATEA 190


>gi|327295753|ref|XP_003232571.1| 30S ribosomal subunit S4 [Trichophyton rubrum CBS 118892]
 gi|326464882|gb|EGD90335.1| 30S ribosomal subunit S4 [Trichophyton rubrum CBS 118892]
          Length = 500

 Score = 37.9 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 8/35 (22%), Positives = 16/35 (45%)

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           FA+ST +AR+ +    + +N   +      +   D
Sbjct: 135 FASSTRQARQFVIHGGVTVNGKKMQYPGYLLNPGD 169


>gi|266618748|pdb|3JXE|A Chain A, Crystal Structure Of Pyrococcus Horikoshii
           Tryptophanyl-Trna Synthetase In Complex With Trpamp
 gi|266618749|pdb|3JXE|B Chain B, Crystal Structure Of Pyrococcus Horikoshii
           Tryptophanyl-Trna Synthetase In Complex With Trpamp
          Length = 392

 Score = 37.9 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 44/260 (16%), Positives = 75/260 (28%), Gaps = 32/260 (12%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTA-YIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           L I   R F     +   +     +G     Y G   +   +H GH+       WLQ+  
Sbjct: 46  LPIFFRRKFFFSHRDYDLILKDYEEGRGFFLYTGRGPSGP-MHIGHIIPFFATKWLQEKF 104

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
              + +       I D         +      +   + I  I +             +  
Sbjct: 105 GVNLYI------QITDDEKFLFKENLTFDDTKRWAYDNILDIIAVGFDPDKT----FIFQ 154

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  +       ++   I     +N  ++          +  +  + F   I  A  F   
Sbjct: 155 NSEFTK---IYEMAIPIAKK--INFSMAKAVFG--FTEQSKIGMI-FFPAIQIAPTF--- 203

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGE---RLKTPKLFALTSPLLTTASGTKMGKTLSG- 243
            +   C +     DQ        D  E     KT  L +   P LT+ SG KM  +    
Sbjct: 204 FERKRCLIP-AAIDQDPYWRLQRDFAESLGYYKTAALHSKFVPSLTSLSG-KMSASKPET 261

Query: 244 AIWLNKEMTSPYNFWQYWRN 263
           AI+L     SP +  +    
Sbjct: 262 AIYLT---DSPEDVEKKVWK 278


>gi|229552047|ref|ZP_04440772.1| ribosomal protein S4 [Lactobacillus rhamnosus LMS2-1]
 gi|229314624|gb|EEN80597.1| ribosomal protein S4 [Lactobacillus rhamnosus LMS2-1]
          Length = 239

 Score = 37.9 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 7/48 (14%), Positives = 19/48 (39%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
            L+ + G A+S  +AR+ +    I ++   +     +++         
Sbjct: 133 NLVFRLGLASSRPQARQLVNHGHITVDGKRLDIPSYEVQPGQVIGLRE 180


>gi|222149596|ref|YP_002550553.1| ribosomal large subunit pseudouridine synthase RluD subfamily
           [Agrobacterium vitis S4]
 gi|221736578|gb|ACM37541.1| ribosomal large subunit pseudouridine synthase RluD subfamily
           [Agrobacterium vitis S4]
          Length = 342

 Score = 37.9 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 13/65 (20%), Positives = 24/65 (36%)

Query: 331 IHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQ 390
                 P   +   E + G     L    G   S N  +  ++  A+ +N + ++  K +
Sbjct: 5   FKQAGEPRKELIAGEDAEGRLDAWLAASLGGDLSRNRVKALIEQGAVFVNGTAVTEPKRK 64

Query: 391 IKLQD 395
           IK  D
Sbjct: 65  IKPGD 69


>gi|253701896|ref|YP_003023085.1| 30S ribosomal protein S4 [Geobacter sp. M21]
 gi|259495281|sp|C6E4N1|RS4_GEOSM RecName: Full=30S ribosomal protein S4
 gi|251776746|gb|ACT19327.1| ribosomal protein S4 [Geobacter sp. M21]
          Length = 208

 Score = 37.9 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 13/44 (29%), Positives = 22/44 (50%)

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
           + GFATS +EAR+ ++     +N   ++   LQ+K  D      
Sbjct: 106 RLGFATSRDEARQLVRHGHFTLNGRKVNIPSLQVKAGDVLQLRE 149


>gi|161349997|ref|NP_143750.2| tryptophanyl-tRNA synthetase [Pyrococcus horikoshii OT3]
 gi|20178122|sp|O59584|SYW_PYRHO RecName: Full=Tryptophanyl-tRNA synthetase; AltName:
           Full=Tryptophan--tRNA ligase; Short=TrpRS
          Length = 386

 Score = 37.9 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 44/260 (16%), Positives = 75/260 (28%), Gaps = 32/260 (12%)

Query: 9   LSILSERGFIHQISNPRELDILCSQGVVTA-YIGYDLTASSLHAGHLTQLMLLFWLQKTG 67
           L I   R F     +   +     +G     Y G   +   +H GH+       WLQ+  
Sbjct: 46  LPIFFRRKFFFSHRDYDLILKDYEEGRGFFLYTGRGPSGP-MHIGHIIPFFATKWLQEKF 104

Query: 68  HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLN 127
              + +       I D         +      +   + I  I +             +  
Sbjct: 105 GVNLYI------QITDDEKFLFKENLTFDDTKRWAYDNILDIIAVGFDPDKT----FIFQ 154

Query: 128 NETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVEL 187
           N  +       ++   I     +N  ++          +  +  + F   I  A  F   
Sbjct: 155 NSEFTK---IYEMAIPIAKK--INFSMAKAVFG--FTEQSKIGMI-FFPAIQIAPTF--- 203

Query: 188 AKNYDCRLQMGGSDQWGNIICGIDLGE---RLKTPKLFALTSPLLTTASGTKMGKTLSG- 243
            +   C +     DQ        D  E     KT  L +   P LT+ SG KM  +    
Sbjct: 204 FERKRCLIP-AAIDQDPYWRLQRDFAESLGYYKTAALHSKFVPSLTSLSG-KMSASKPET 261

Query: 244 AIWLNKEMTSPYNFWQYWRN 263
           AI+L     SP +  +    
Sbjct: 262 AIYLT---DSPEDVEKKVWK 278


>gi|84502893|ref|ZP_01001006.1| lysyl-tRNA synthetase [Oceanicola batsensis HTCC2597]
 gi|84388876|gb|EAQ01746.1| lysyl-tRNA synthetase [Oceanicola batsensis HTCC2597]
          Length = 528

 Score = 37.9 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 27/85 (31%), Gaps = 6/85 (7%)

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            DF       D   +M G D   N      + E L   K    T  L    +G K+ K+ 
Sbjct: 240 PDFGARWAALDVDFEMYGKDHSTNTPIYDRICEILGGRKPEHFTYELFLDQNGEKISKSK 299

Query: 242 SGAI----WLN--KEMTSPYNFWQY 260
              +    WL      +  Y  +Q 
Sbjct: 300 GNGLSIDAWLTYASTESLSYFMFQK 324


>gi|332521607|ref|ZP_08398060.1| ribosomal protein S4 [Lacinutrix algicola 5H-3-7-4]
 gi|332042696|gb|EGI78896.1| ribosomal protein S4 [Lacinutrix algicola 5H-3-7-4]
          Length = 201

 Score = 37.9 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 19/42 (45%)

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
           G A + + AR+ +    I +N  +++    Q+K  D  +   
Sbjct: 103 GIAPTRSAARQLVSHRHITVNGELVNVPSYQLKAGDVVAVRE 144


>gi|330470145|ref|YP_004407888.1| 30S ribosomal protein S4 [Verrucosispora maris AB-18-032]
 gi|328813116|gb|AEB47288.1| 30S ribosomal protein S4 [Verrucosispora maris AB-18-032]
          Length = 208

 Score = 37.9 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 9/44 (20%), Positives = 20/44 (45%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
            ++ +AG+A S + AR+ +K     +N   +     ++   D  
Sbjct: 102 NVVYRAGYAKSRDMARQLVKHGHFTVNGKKVDIPSYRVSAHDII 145


>gi|291336627|gb|ADD96173.1| hypothetical protein [uncultured organism MedDCM-OCT-S05-C185]
          Length = 59

 Score = 37.9 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 9/30 (30%), Positives = 17/30 (56%), Gaps = 1/30 (3%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIIS 385
           + +AG   S  EA R + +  + I+N +I+
Sbjct: 21  LARAGLC-SRREAERWINAGRVSIDNEVIN 49


>gi|313836989|gb|EFS74703.1| S4 domain protein [Propionibacterium acnes HL037PA2]
 gi|314929421|gb|EFS93252.1| S4 domain protein [Propionibacterium acnes HL044PA1]
 gi|314971495|gb|EFT15593.1| S4 domain protein [Propionibacterium acnes HL037PA3]
          Length = 68

 Score = 37.9 bits (87), Expect = 3.0,   Method: Composition-based stats.
 Identities = 9/46 (19%), Positives = 20/46 (43%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           + L   +  A  A +  +AR  + S  + +N+ + +    Q+   D
Sbjct: 2   IRLGQYLKFANLAETGGQARELIASGMVSVNDEVETRRGRQLHPGD 47


>gi|289641139|ref|ZP_06473307.1| ribosomal protein S4 [Frankia symbiont of Datisca glomerata]
 gi|289509080|gb|EFD30011.1| ribosomal protein S4 [Frankia symbiont of Datisca glomerata]
          Length = 208

 Score = 37.9 bits (87), Expect = 3.0,   Method: Composition-based stats.
 Identities = 9/43 (20%), Positives = 21/43 (48%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
            ++ +AGFA S + AR+ ++   + +N   +     ++   D 
Sbjct: 102 NVVYRAGFAPSRDAARQAVRHGHVVVNGGKVDIPSYRVSENDI 144


>gi|253566696|ref|ZP_04844149.1| 30S ribosomal protein S4 [Bacteroides sp. 3_2_5]
 gi|251944868|gb|EES85343.1| 30S ribosomal protein S4 [Bacteroides sp. 3_2_5]
          Length = 201

 Score = 37.9 bits (87), Expect = 3.0,   Method: Composition-based stats.
 Identities = 8/82 (9%), Positives = 28/82 (34%), Gaps = 3/82 (3%)

Query: 320 ATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKI 379
                  F+ +  ++ + T  +    +   +    ++ + G A +   AR+ +    I +
Sbjct: 65  EKQFRNLFEKAATAKGI-TGEVLLQMLEGRLD--NIVFRLGIAPTRAAARQLVGHKHITV 121

Query: 380 NNSIISNEKLQIKLQDFDSTGN 401
           +  +++     +K         
Sbjct: 122 DGQVVNIPSYVVKPGQLIGVRE 143


>gi|71403717|ref|XP_804630.1| tryptophanyl-tRNA synthetase [Trypanosoma cruzi strain CL Brener]
 gi|70867703|gb|EAN82779.1| tryptophanyl-tRNA synthetase, putative [Trypanosoma cruzi]
          Length = 371

 Score = 37.9 bits (87), Expect = 3.0,   Method: Composition-based stats.
 Identities = 23/127 (18%), Positives = 43/127 (33%), Gaps = 19/127 (14%)

Query: 38  AYIGYDLTASSLHAGHLTQLMLLFWLQKT-GHKPISLMGGGTSIIGDPSFRDESRRMMRS 96
            Y G   +A S+H GH+   +L  +LQ   G   +  +        D         +   
Sbjct: 58  LYTGRGPSAQSMHIGHVIPFLLTRYLQDALGLPLVIQITD------DEKHFFRDIPVSGE 111

Query: 97  QEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSF 156
           +     +E IK I +    +G       +  N   +  +          +   V RML+ 
Sbjct: 112 RASGLVVENIKDIIA----FGFDPRKTFIFRNTVHMGDMYP--------TVVQVQRMLTL 159

Query: 157 ESVRSRL 163
            +V++  
Sbjct: 160 SAVKNTF 166


>gi|298370567|ref|ZP_06981882.1| ribosomal protein S4 [Neisseria sp. oral taxon 014 str. F0314]
 gi|298281177|gb|EFI22667.1| ribosomal protein S4 [Neisseria sp. oral taxon 014 str. F0314]
          Length = 206

 Score = 37.9 bits (87), Expect = 3.0,   Method: Composition-based stats.
 Identities = 11/48 (22%), Positives = 24/48 (50%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
            ++ + GF ++  EAR+ +   AI +N  +++    Q+K  D  +   
Sbjct: 100 NVVYRLGFGSTRAEARQLVSHKAITVNGQVVNIPSYQVKAGDIIAVRE 147


>gi|291538915|emb|CBL12026.1| ribosomal small subunit pseudouridine synthase A [Roseburia
           intestinalis XB6B4]
          Length = 235

 Score = 37.9 bits (87), Expect = 3.0,   Method: Composition-based stats.
 Identities = 8/46 (17%), Positives = 25/46 (54%), Gaps = 1/46 (2%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           M L  L+ + G   S +E +++++S  + +N  ++   + ++  ++
Sbjct: 1   MRLDKLLTELG-TGSRSEVKKYIRSGLVTVNGEVVKKPEQKVDEKN 45


>gi|291536218|emb|CBL09330.1| ribosomal small subunit pseudouridine synthase A [Roseburia
           intestinalis M50/1]
          Length = 235

 Score = 37.9 bits (87), Expect = 3.0,   Method: Composition-based stats.
 Identities = 8/46 (17%), Positives = 25/46 (54%), Gaps = 1/46 (2%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           M L  L+ + G   S +E +++++S  + +N  ++   + ++  ++
Sbjct: 1   MRLDKLLTELG-TGSRSEVKKYIRSGLVTVNGEVVKKPEQKVDEKN 45


>gi|160888373|ref|ZP_02069376.1| hypothetical protein BACUNI_00786 [Bacteroides uniformis ATCC 8492]
 gi|317477726|ref|ZP_07936919.1| ribosomal protein S4 [Bacteroides sp. 4_1_36]
 gi|319900951|ref|YP_004160679.1| SSU ribosomal protein S4P [Bacteroides helcogenes P 36-108]
 gi|156862050|gb|EDO55481.1| hypothetical protein BACUNI_00786 [Bacteroides uniformis ATCC 8492]
 gi|316906071|gb|EFV27832.1| ribosomal protein S4 [Bacteroides sp. 4_1_36]
 gi|319415982|gb|ADV43093.1| SSU ribosomal protein S4P [Bacteroides helcogenes P 36-108]
          Length = 201

 Score = 37.9 bits (87), Expect = 3.0,   Method: Composition-based stats.
 Identities = 9/82 (10%), Positives = 28/82 (34%), Gaps = 3/82 (3%)

Query: 320 ATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKI 379
                  F+ +  ++ + T  I    +   +    ++ + G A +   AR+ +    I +
Sbjct: 65  EKQFRNLFEKAETAKGI-TGEILLQLLEGRLD--NIVFRLGIAPTRAAARQLVSHKHITV 121

Query: 380 NNSIISNEKLQIKLQDFDSTGN 401
           +  +++     +K         
Sbjct: 122 DGEVVNIPSYAVKPGQVIGVRE 143


>gi|156938197|ref|YP_001435993.1| 30S ribosomal protein S4e [Ignicoccus hospitalis KIN4/I]
 gi|189045350|sp|A8ACD4|RS4E_IGNH4 RecName: Full=30S ribosomal protein S4e
 gi|156567181|gb|ABU82586.1| SSU ribosomal protein S4E [Ignicoccus hospitalis KIN4/I]
          Length = 255

 Score = 37.9 bits (87), Expect = 3.0,   Method: Composition-based stats.
 Identities = 12/53 (22%), Positives = 25/53 (47%), Gaps = 1/53 (1%)

Query: 346 VSRGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
           +   + LL L+    G+A ++ EAR+ +    IK++  +  + K  +   D  
Sbjct: 40  IEESIPLLILVRDVLGYAETSREARKLIAEGRIKVDGRVRKDYKFPVGAMDVI 92


>gi|239996313|ref|ZP_04716837.1| 30S ribosomal protein S4 [Alteromonas macleodii ATCC 27126]
 gi|332142182|ref|YP_004427920.1| 30S ribosomal protein S4 [Alteromonas macleodii str. 'Deep
           ecotype']
 gi|226697796|sp|B4RT52|RS4_ALTMD RecName: Full=30S ribosomal protein S4
 gi|327552204|gb|AEA98922.1| 30S ribosomal protein S4 [Alteromonas macleodii str. 'Deep
           ecotype']
          Length = 206

 Score = 37.9 bits (87), Expect = 3.0,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 28/63 (44%), Gaps = 8/63 (12%)

Query: 347 SRGMGLLTLIVK--------AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
           + G  LL L+ +         GFA++  EAR+ +   AI +N  +++     +  +D  S
Sbjct: 85  NTGENLLQLLEQRLDNVVYRMGFASTRAEARQLVSHKAIMVNGQVVNIPSFNVSAEDVVS 144

Query: 399 TGN 401
              
Sbjct: 145 VRE 147


>gi|284039270|ref|YP_003389200.1| RNA-binding S4 domain protein [Spirosoma linguale DSM 74]
 gi|283818563|gb|ADB40401.1| RNA-binding S4 domain protein [Spirosoma linguale DSM 74]
          Length = 638

 Score = 37.9 bits (87), Expect = 3.0,   Method: Composition-based stats.
 Identities = 12/49 (24%), Positives = 19/49 (38%), Gaps = 1/49 (2%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           I  +G   S  EA   +    I +N  I++    ++K  D    G   L
Sbjct: 411 IANSGVC-SRREADELIAHGDISVNGKIVTEMGYKVKEGDTVKYGTKVL 458


>gi|224013303|ref|XP_002295303.1| probable tryptophanyl tRNA synthetase [Thalassiosira pseudonana
           CCMP1335]
 gi|220969026|gb|EED87369.1| probable tryptophanyl tRNA synthetase [Thalassiosira pseudonana
           CCMP1335]
          Length = 405

 Score = 37.9 bits (87), Expect = 3.0,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 19/39 (48%)

Query: 35  VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
               Y G   ++S++H GHL   +   WLQK    P+ +
Sbjct: 74  PFYLYTGRGPSSSAMHLGHLVPFLFTAWLQKAFRCPLVI 112


>gi|210624083|ref|ZP_03294183.1| hypothetical protein CLOHIR_02139 [Clostridium hiranonis DSM 13275]
 gi|210153216|gb|EEA84222.1| hypothetical protein CLOHIR_02139 [Clostridium hiranonis DSM 13275]
          Length = 198

 Score = 37.9 bits (87), Expect = 3.0,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 26/68 (38%), Gaps = 8/68 (11%)

Query: 342 SKDEVSRGMGLLTLI--------VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL 393
            K + S G  L+ L+         + G A+S  +AR+ +    I +N   +      + +
Sbjct: 72  EKSKESTGTVLIQLLECRLDNIVYRLGLASSIRQARQMVVHGHILVNGKKVDRPSFGLNV 131

Query: 394 QDFDSTGN 401
            D  S   
Sbjct: 132 GDVVSLRE 139


>gi|195978740|ref|YP_002123984.1| ribosomal large subunit pseudouridine synthase B RluB
           [Streptococcus equi subsp. zooepidemicus MGCS10565]
 gi|195975445|gb|ACG62971.1| ribosomal large subunit pseudouridine synthase B RluB
           [Streptococcus equi subsp. zooepidemicus MGCS10565]
          Length = 266

 Score = 37.9 bits (87), Expect = 3.0,   Method: Composition-based stats.
 Identities = 6/35 (17%), Positives = 15/35 (42%)

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
             S  +A   +K   + +N  ++++    +K  D 
Sbjct: 38  VASRRKAEELIKRGLVTLNGQVVTDLATTVKSGDL 72


>gi|150389493|ref|YP_001319542.1| 30S ribosomal protein S4 [Alkaliphilus metalliredigens QYMF]
 gi|172052476|sp|A6TNW5|RS4C_ALKMQ RecName: Full=30S ribosomal protein S4 C
 gi|149949355|gb|ABR47883.1| RNA-binding S4 domain protein [Alkaliphilus metalliredigens QYMF]
          Length = 198

 Score = 37.9 bits (87), Expect = 3.0,   Method: Composition-based stats.
 Identities = 11/36 (30%), Positives = 18/36 (50%)

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           GFA+S  EAR+ +    + +N   +      +KL D
Sbjct: 98  GFASSIREARQMVNHGHLLVNGQKVDIPSYGLKLGD 133


>gi|324999251|ref|ZP_08120363.1| 30S ribosomal protein S4 [Pseudonocardia sp. P1]
          Length = 201

 Score = 37.9 bits (87), Expect = 3.0,   Method: Composition-based stats.
 Identities = 16/107 (14%), Positives = 31/107 (28%), Gaps = 16/107 (14%)

Query: 311 HGR------EEAEKAATAAMECFDMSIHSQHMPTI--SISKDEVSRGMGLLTLI------ 356
           HGR      E   +        F   +  + +        + E   G  LL ++      
Sbjct: 36  HGRIRIKETEYLLQLQEKQKARFGYGLQEKQLRAYYEEAHRREGKTGDELLQILESRLDN 95

Query: 357 --VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
              +AG A +   AR+ +      +N   +     ++   D      
Sbjct: 96  VVYRAGLARTRRMARQLVNHGHFLVNGKKVDIPSFKVSKYDIIDVRE 142


>gi|149280291|ref|ZP_01886413.1| pseudouridylate synthase (ribosomal large subunit pseudouridine
           synthase B) [Pedobacter sp. BAL39]
 gi|149228980|gb|EDM34377.1| pseudouridylate synthase (ribosomal large subunit pseudouridine
           synthase B) [Pedobacter sp. BAL39]
          Length = 463

 Score = 37.9 bits (87), Expect = 3.0,   Method: Composition-based stats.
 Identities = 11/61 (18%), Positives = 24/61 (39%), Gaps = 2/61 (3%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ-DFDSTGNIKLSFGKKNHIIC 414
           I  +G   S  +A   + +  + +N  ++S    +I    D        L   KK +++ 
Sbjct: 234 IANSGIC-SRRKADELIAAGVVSVNGEVVSELGHKIDPAKDQVRYNGELLKREKKVYVLL 292

Query: 415 H 415
           +
Sbjct: 293 N 293


>gi|148555617|ref|YP_001263199.1| pseudouridine synthase [Sphingomonas wittichii RW1]
 gi|148500807|gb|ABQ69061.1| pseudouridine synthase [Sphingomonas wittichii RW1]
          Length = 286

 Score = 37.9 bits (87), Expect = 3.0,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 17/45 (37%), Gaps = 1/45 (2%)

Query: 348 RGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
               +  L+ +AG A S  E  R +    + I+ + I      + 
Sbjct: 45  EPQRIAKLLARAGIA-SRREIERMIAEGRVAIDGAAIDTPATLLT 88


>gi|301120326|ref|XP_002907890.1| ribosomal large subunit pseudouridine synthase F, putative
           [Phytophthora infestans T30-4]
 gi|262102921|gb|EEY60973.1| ribosomal large subunit pseudouridine synthase F, putative
           [Phytophthora infestans T30-4]
          Length = 293

 Score = 37.9 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 18/94 (19%), Positives = 38/94 (40%), Gaps = 13/94 (13%)

Query: 301 IIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAG 360
            + T +T  VHG     + A            S + PT   S+D     + L  L+ + G
Sbjct: 7   TLRTTLTRRVHGAATLVQVAN----------DSSNSPTS--SQDNEKSLVRLAKLMAQKG 54

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
              S  EA  ++++  + ++   +  + L++ + 
Sbjct: 55  LC-SRREAEAYIQAGDVLVDGERVQADWLKVPVD 87


>gi|227499884|ref|ZP_03929977.1| tryptophan--tRNA ligase [Anaerococcus tetradius ATCC 35098]
 gi|227217993|gb|EEI83266.1| tryptophan--tRNA ligase [Anaerococcus tetradius ATCC 35098]
          Length = 377

 Score = 37.9 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 31/226 (13%), Positives = 66/226 (29%), Gaps = 38/226 (16%)

Query: 44  LTASSLHAGHLTQ-LMLLFWLQKTGH--KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    L     +Q+  +  +   ++    ++  +     + R     + + 
Sbjct: 28  PTGR-LHLGHYVGSLRNRVRMQEEANYDRMYVMIADSQALTDNFDNPGKIR-----ENLI 81

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           E       +          K    + +    L  + +   L  +              ++
Sbjct: 82  EVALDYLSVG-----LDPNKVTFFVQSQVEELTELTFY-FLNLVSLSRLERNPTVKAEIK 135

Query: 161 SR-LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
            R  +      F+   Y + QA D +     +D  +   G DQ   +    ++       
Sbjct: 136 LRNFETSLPAGFI--IYPVSQAADILL----FDANIVPVGEDQEPMLEQAREIARSFNN- 188

Query: 220 KLFALTSP-------------LLTTASGT-KMGKTLSGAIWLNKEM 251
            ++  T                +    G  KM K+L  AI+L  + 
Sbjct: 189 -IYGETFIEPKAVLPEEKIARRMPGIDGAAKMSKSLGNAIYLADDK 233


>gi|261367368|ref|ZP_05980251.1| ribosomal large subunit pseudouridine synthase B [Subdoligranulum
           variabile DSM 15176]
 gi|282570129|gb|EFB75664.1| ribosomal large subunit pseudouridine synthase B [Subdoligranulum
           variabile DSM 15176]
          Length = 267

 Score = 37.9 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 9/65 (13%), Positives = 21/65 (32%), Gaps = 10/65 (15%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIIS-----NEKLQIKLQDFDSTGNIKLSF 406
           +  ++   G   S  EA R + +  +K+N   +      +          D      +  
Sbjct: 6   IQKVLADQGIC-SRREAERLIAAGKVKVNGRPVGLGDKMDPDY--DKVSIDGKNVRIVR- 61

Query: 407 GKKNH 411
            K+ +
Sbjct: 62  -KRQY 65


>gi|311030759|ref|ZP_07708849.1| pseudouridine synthase [Bacillus sp. m3-13]
          Length = 242

 Score = 37.9 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 12/64 (18%), Positives = 28/64 (43%), Gaps = 1/64 (1%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNH 411
           L  +I  AG A S  +A   +K   +++N+ ++    +++   D      I +   K  +
Sbjct: 4   LQKVIAHAGIA-SRRKAEELIKEGKVRVNDKVVKELGVKVNPNDKIEVEGIPVEREKPVY 62

Query: 412 IICH 415
            + +
Sbjct: 63  FLLY 66


>gi|308189938|ref|YP_003922869.1| tryptophan--tRNA ligase [Mycoplasma fermentans JER]
 gi|319777218|ref|YP_004136869.1| tryptophanyl-tRNA synthetase [Mycoplasma fermentans M64]
 gi|307624680|gb|ADN68985.1| tryptophan--tRNA ligase [Mycoplasma fermentans JER]
 gi|318038293|gb|ADV34492.1| Tryptophanyl-tRNA synthetase [Mycoplasma fermentans M64]
          Length = 333

 Score = 37.9 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 43/293 (14%), Positives = 96/293 (32%), Gaps = 46/293 (15%)

Query: 41  GYDLTASSLHAGHLTQ----LMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRS 96
           G   T   L  G+        + L       +  ++ +   T+   DP    ++RR    
Sbjct: 9   GIKPTGD-LTLGNYIGALRNFVKLQENYDEAYYFVADLHALTTGYVDPKELYQARR---- 63

Query: 97  QEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSF 156
           + +   +        S I Y +   +  +     WL + +         S   ++RM  F
Sbjct: 64  EIVTMYLACGLDPKKSTIFYQSDVVEHTL---AQWLMTTEI--------SIGELSRMTQF 112

Query: 157 ESVRSRLKREQS----LSFLEFNYMILQA-------YDFVELAKNYDCRLQMGGS----- 200
           +    ++ ++ +    +      Y +L A        DFV + ++    L++  +     
Sbjct: 113 KDKSQKMSKQANGTEKIPVGLLMYPVLMAADILIYNPDFVPIGEDQKQHLELARTIAERL 172

Query: 201 --DQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFW 258
             D   N      +   +   ++ +LT P        KM K+  G          P   +
Sbjct: 173 NRDYKTNFKLAEGIIPPVG-ARIMSLTDPT------KKMSKSDKGTKATIYLHDDPEVAY 225

Query: 259 QYWR-NIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMV 310
           +    ++ D++   +        ++ ++  A L  K + EA+K    +     
Sbjct: 226 KKIMKSVTDSENKVYISEDKPGVLNLLNIYASLTNKTLKEAEKEFKDKDYAQF 278


>gi|270294726|ref|ZP_06200927.1| 30S ribosomal protein S4 [Bacteroides sp. D20]
 gi|270273973|gb|EFA19834.1| 30S ribosomal protein S4 [Bacteroides sp. D20]
          Length = 201

 Score = 37.9 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 9/82 (10%), Positives = 28/82 (34%), Gaps = 3/82 (3%)

Query: 320 ATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKI 379
                  F+ +  ++ + T  I    +   +    ++ + G A +   AR+ +    I +
Sbjct: 65  EKQFRNLFEKAETAKGI-TGEILLQLLEGRLD--NIVFRLGIAPTRAAARQLVSHKHITV 121

Query: 380 NNSIISNEKLQIKLQDFDSTGN 401
           +  +++     +K         
Sbjct: 122 DGEVVNIPSYAVKPGQVIGVRE 143


>gi|168211953|ref|ZP_02637578.1| tryptophanyl-tRNA synthetase [Clostridium perfringens B str. ATCC
           3626]
 gi|170710122|gb|EDT22304.1| tryptophanyl-tRNA synthetase [Clostridium perfringens B str. ATCC
           3626]
          Length = 332

 Score = 37.9 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 28/136 (20%), Positives = 47/136 (34%), Gaps = 19/136 (13%)

Query: 150 VNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICG 209
           ++RM  ++    ++          FNY +L A D +     Y+  L   G DQ  ++   
Sbjct: 106 LSRMTQYKDKSKKMGDSIGAGL--FNYPVLMAADILL----YNADLVPVGKDQMQHLELA 159

Query: 210 IDLGERLKTPKLFALTSP-LLTTASG----------TKMGKTLSGAIWLNKEMTSPYNFW 258
            D+G R         T P       G           KM K+ +        M  P    
Sbjct: 160 RDIGTRFNNSYSKTFTIPEGYVPKEGAKIMDLQDPSKKMSKSDANPNGFILIMDEPNVIR 219

Query: 259 QYW-RNIDDAD-VVSF 272
           +   R + D+  VV++
Sbjct: 220 KKISRAVTDSIGVVNY 235


>gi|58039267|ref|YP_191231.1| tRNA pseudouridine synthase A [Gluconobacter oxydans 621H]
 gi|58001681|gb|AAW60575.1| tRNA pseudouridine synthase A [Gluconobacter oxydans 621H]
          Length = 264

 Score = 37.9 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 13/62 (20%), Positives = 26/62 (41%), Gaps = 7/62 (11%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            +G  +   + +AG   S  +  R ++   IK+   I+++    ++  D      I L  
Sbjct: 18  PKGERIAKALARAG-VASRRDIERMIEDGRIKLGGQIVTHPATFVQPGD------IVLVD 70

Query: 407 GK 408
           GK
Sbjct: 71  GK 72


>gi|56751203|ref|YP_171904.1| hemolysin-like protein [Synechococcus elongatus PCC 6301]
 gi|81299130|ref|YP_399338.1| hemolysin A [Synechococcus elongatus PCC 7942]
 gi|56686162|dbj|BAD79384.1| hemolysin-like protein [Synechococcus elongatus PCC 6301]
 gi|81168011|gb|ABB56351.1| hemolysin A [Synechococcus elongatus PCC 7942]
          Length = 272

 Score = 37.9 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 7/40 (17%), Positives = 20/40 (50%)

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
           L+V+ G   S  +A+R +++  +++  +I+      +   
Sbjct: 9   LLVERGLCPSRQQAQRLIRAGEVRVAQAIVDKPGSLVAED 48


>gi|168218147|ref|ZP_02643772.1| tryptophanyl-tRNA synthetase [Clostridium perfringens NCTC 8239]
 gi|182379840|gb|EDT77319.1| tryptophanyl-tRNA synthetase [Clostridium perfringens NCTC 8239]
          Length = 332

 Score = 37.9 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 28/136 (20%), Positives = 47/136 (34%), Gaps = 19/136 (13%)

Query: 150 VNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICG 209
           ++RM  ++    ++          FNY +L A D +     Y+  L   G DQ  ++   
Sbjct: 106 LSRMTQYKDKSKKMGDSIGAGL--FNYPVLMAADILL----YNADLVPVGKDQMQHLELA 159

Query: 210 IDLGERLKTPKLFALTSP-LLTTASG----------TKMGKTLSGAIWLNKEMTSPYNFW 258
            D+G R         T P       G           KM K+ +        M  P    
Sbjct: 160 RDIGTRFNNSYSKTFTIPEGYVPKEGAKIMDLQDPSKKMSKSDANPNGFILIMDEPNVIR 219

Query: 259 QYW-RNIDDAD-VVSF 272
           +   R + D+  VV++
Sbjct: 220 KKISRAVTDSIGVVNY 235


>gi|110802893|ref|YP_697927.1| tryptophanyl-tRNA synthetase [Clostridium perfringens SM101]
 gi|110683394|gb|ABG86764.1| tryptophanyl-tRNA synthetase [Clostridium perfringens SM101]
          Length = 332

 Score = 37.9 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 28/136 (20%), Positives = 47/136 (34%), Gaps = 19/136 (13%)

Query: 150 VNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICG 209
           ++RM  ++    ++          FNY +L A D +     Y+  L   G DQ  ++   
Sbjct: 106 LSRMTQYKDKSKKMGDSIGAGL--FNYPVLMAADILL----YNADLVPVGKDQMQHLELA 159

Query: 210 IDLGERLKTPKLFALTSP-LLTTASG----------TKMGKTLSGAIWLNKEMTSPYNFW 258
            D+G R         T P       G           KM K+ +        M  P    
Sbjct: 160 RDIGTRFNNSYSKTFTIPEGYVPKEGAKIMDLQDPSKKMSKSDANPNGFILIMDEPNVIR 219

Query: 259 QYW-RNIDDAD-VVSF 272
           +   R + D+  VV++
Sbjct: 220 KKISRAVTDSIGVVNY 235


>gi|218767590|ref|YP_002342102.1| hypothetical protein NMA0633 [Neisseria meningitidis Z2491]
 gi|121051598|emb|CAM07898.1| hypothetical protein NMA0633 [Neisseria meningitidis Z2491]
          Length = 77

 Score = 37.9 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 10/53 (18%), Positives = 22/53 (41%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
           E +  + L  L+  AG A S  +A+  +    +  N    + +  +I+  +  
Sbjct: 8   EDNEYIALCDLLKLAGLAESGGQAKAFIAEGLVLRNGETETRKTAKIRSGEVI 60


>gi|119358464|ref|YP_913108.1| tryptophanyl-tRNA synthetase [Chlorobium phaeobacteroides DSM 266]
 gi|119355813|gb|ABL66684.1| tryptophanyl-tRNA synthetase [Chlorobium phaeobacteroides DSM 266]
          Length = 340

 Score = 37.9 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 24/120 (20%), Positives = 43/120 (35%), Gaps = 22/120 (18%)

Query: 167 QSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTS 226
           +SL +    Y +LQA D + L K     + +G  DQ  ++    ++  +        L  
Sbjct: 128 ESLVYGHLGYPVLQAADIL-LYK--GTVVPVG-EDQIPHVEITREIARKFNNHYPHPLNG 183

Query: 227 PL-------------LTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRN-IDDADVVS 271
            +             L    G  KM K+L   I L+         ++  RN + D + + 
Sbjct: 184 VVFMEPEPKITKFSRLVGLDGKSKMSKSLGNTILLS---DGSEEVFKKVRNAVTDTEKIR 240


>gi|258565507|ref|XP_002583498.1| tryptophanyl-tRNA synthetase [Uncinocarpus reesii 1704]
 gi|237907199|gb|EEP81600.1| tryptophanyl-tRNA synthetase [Uncinocarpus reesii 1704]
          Length = 436

 Score = 37.9 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 18/52 (34%), Gaps = 1/52 (1%)

Query: 15  RGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           RG      +  + LD   +      Y G   ++ +LH GH        WL  
Sbjct: 79  RGLFFSHRDFEKILDRYEAGEPFFMYTGRGPSSEALHLGHTIPFSFTKWLHD 130


>gi|184201169|ref|YP_001855376.1| pseudouridine synthase [Kocuria rhizophila DC2201]
 gi|183581399|dbj|BAG29870.1| pseudouridine synthase [Kocuria rhizophila DC2201]
          Length = 368

 Score = 37.9 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 8/62 (12%), Positives = 25/62 (40%), Gaps = 2/62 (3%)

Query: 333 SQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
            ++ P   +   +   G+ L  L+ +AG   S       ++   + ++  I++   +++ 
Sbjct: 114 PKNPPVDRLEVHD-ENGVRLQKLMAQAG-VASRRVCEEMIQDGRVSVDGEIVTELGVRVD 171

Query: 393 LQ 394
             
Sbjct: 172 PA 173


>gi|182625755|ref|ZP_02953523.1| tryptophanyl-tRNA synthetase [Clostridium perfringens D str.
           JGS1721]
 gi|177909017|gb|EDT71499.1| tryptophanyl-tRNA synthetase [Clostridium perfringens D str.
           JGS1721]
          Length = 332

 Score = 37.9 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 28/136 (20%), Positives = 47/136 (34%), Gaps = 19/136 (13%)

Query: 150 VNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICG 209
           ++RM  ++    ++          FNY +L A D +     Y+  L   G DQ  ++   
Sbjct: 106 LSRMTQYKDKSKKMGDSIGAGL--FNYPVLMAADILL----YNADLVPVGKDQMQHLELA 159

Query: 210 IDLGERLKTPKLFALTSP-LLTTASG----------TKMGKTLSGAIWLNKEMTSPYNFW 258
            D+G R         T P       G           KM K+ +        M  P    
Sbjct: 160 RDIGTRFNNSYSKTFTIPEGYVPKEGAKIMDLQDPSKKMSKSDANPNGFILIMDEPNVIR 219

Query: 259 QYW-RNIDDAD-VVSF 272
           +   R + D+  VV++
Sbjct: 220 KKISRAVTDSIGVVNY 235


>gi|152993621|ref|YP_001359342.1| leucyl-tRNA synthetase [Sulfurovum sp. NBC37-1]
 gi|151425482|dbj|BAF72985.1| leucyl-tRNA synthetase [Sulfurovum sp. NBC37-1]
          Length = 813

 Score = 37.9 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 14/92 (15%), Positives = 24/92 (26%), Gaps = 11/92 (11%)

Query: 210 IDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADV 269
            DLG          L +  +    G KM K+    +  + +       +        AD 
Sbjct: 554 RDLGHHDIDEPFTRLLTQGMVLMDGAKMSKSKGNTV--DPDALV--EKYG-------ADT 602

Query: 270 VSFAKRLTTLPMSEIDRMAKLQGKEINEAKKI 301
                     P  E++             KK+
Sbjct: 603 ARLFILFAAPPQKELEWNDSAVEGAFRFIKKL 634


>gi|110799150|ref|YP_695067.1| tryptophanyl-tRNA synthetase [Clostridium perfringens ATCC 13124]
 gi|110673797|gb|ABG82784.1| tryptophanyl-tRNA synthetase [Clostridium perfringens ATCC 13124]
          Length = 332

 Score = 37.9 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 28/136 (20%), Positives = 47/136 (34%), Gaps = 19/136 (13%)

Query: 150 VNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICG 209
           ++RM  ++    ++          FNY +L A D +     Y+  L   G DQ  ++   
Sbjct: 106 LSRMTQYKDKSKKMGDSIGAGL--FNYPVLMAADILL----YNADLVPVGKDQMQHLELA 159

Query: 210 IDLGERLKTPKLFALTSP-LLTTASG----------TKMGKTLSGAIWLNKEMTSPYNFW 258
            D+G R         T P       G           KM K+ +        M  P    
Sbjct: 160 RDIGTRFNNSYSKTFTIPEGYVPKEGAKIMDLQDPSKKMSKSDANPNGFILIMDEPNVIR 219

Query: 259 QYW-RNIDDAD-VVSF 272
           +   R + D+  VV++
Sbjct: 220 KKISRAVTDSIGVVNY 235


>gi|322379139|ref|ZP_08053536.1| leucyl-tRNA synthetase [Helicobacter suis HS1]
 gi|322380431|ref|ZP_08054633.1| leucyl-tRNA synthetase [Helicobacter suis HS5]
 gi|321147142|gb|EFX41840.1| leucyl-tRNA synthetase [Helicobacter suis HS5]
 gi|321148435|gb|EFX42938.1| leucyl-tRNA synthetase [Helicobacter suis HS1]
          Length = 815

 Score = 37.9 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 19/122 (15%), Positives = 35/122 (28%), Gaps = 17/122 (13%)

Query: 210 IDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADV 269
            DLG         ALT+  +   +G KM K+    +       +P    + +     AD+
Sbjct: 555 RDLGYLHINEPFQALTTQGMVLKNGAKMSKSKGNVV-------TPQEILEKY----GADI 603

Query: 270 VSFAKRLTTLPMSEIDRMAKLQGKEINEAKK-----IIATEITTM-VHGREEAEKAATAA 323
                     P  E++   +         K+      +A     +          A   A
Sbjct: 604 ARAYIHFVAPPNKELEWNDQALEGAARFLKRFYEKSFLAKACKQLPFLDVNNLSDAEKEA 663

Query: 324 ME 325
            +
Sbjct: 664 RK 665


>gi|256825859|ref|YP_003149819.1| 30S ribosomal protein S4 [Kytococcus sedentarius DSM 20547]
 gi|256689252|gb|ACV07054.1| SSU ribosomal protein S4P [Kytococcus sedentarius DSM 20547]
          Length = 202

 Score = 37.9 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 17/104 (16%), Positives = 32/104 (30%), Gaps = 16/104 (15%)

Query: 311 HGR------EEAEKAATAAMECFDMSIHSQHMPTI--SISKDEVSRGMGLLTLI------ 356
           HGR      E   +        F   +  +         ++     G  LLT++      
Sbjct: 36  HGRRRTQEKEYLAQLQEKQKARFMYGVMEKQFRRYYAEAARRPGKTGDNLLTILESRLDN 95

Query: 357 --VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
              +AG A +   AR+ +      +N   +    +Q+   D   
Sbjct: 96  VIYRAGIAPTRRAARQLVTHGHFLLNGQRVDVPSIQVSKFDIID 139


>gi|168206748|ref|ZP_02632753.1| tryptophanyl-tRNA synthetase [Clostridium perfringens E str.
           JGS1987]
 gi|170661847|gb|EDT14530.1| tryptophanyl-tRNA synthetase [Clostridium perfringens E str.
           JGS1987]
          Length = 332

 Score = 37.9 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 28/136 (20%), Positives = 47/136 (34%), Gaps = 19/136 (13%)

Query: 150 VNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICG 209
           ++RM  ++    ++          FNY +L A D +     Y+  L   G DQ  ++   
Sbjct: 106 LSRMTQYKDKSKKMGDSIGAGL--FNYPVLMAADILL----YNADLVPVGKDQMQHLELA 159

Query: 210 IDLGERLKTPKLFALTSP-LLTTASG----------TKMGKTLSGAIWLNKEMTSPYNFW 258
            D+G R         T P       G           KM K+ +        M  P    
Sbjct: 160 RDIGTRFNNSYSKTFTIPEGYVPKEGAKIMDLQDPSKKMSKSDANPNGFILIMDEPNVIR 219

Query: 259 QYW-RNIDDAD-VVSF 272
           +   R + D+  VV++
Sbjct: 220 KKISRAVTDSIGVVNY 235


>gi|169344712|ref|ZP_02865672.1| tryptophanyl-tRNA synthetase [Clostridium perfringens C str.
           JGS1495]
 gi|169297147|gb|EDS79262.1| tryptophanyl-tRNA synthetase [Clostridium perfringens C str.
           JGS1495]
          Length = 332

 Score = 37.9 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 28/136 (20%), Positives = 47/136 (34%), Gaps = 19/136 (13%)

Query: 150 VNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICG 209
           ++RM  ++    ++          FNY +L A D +     Y+  L   G DQ  ++   
Sbjct: 106 LSRMTQYKDKSKKMGDSIGAGL--FNYPVLMAADILL----YNADLVPVGKDQMQHLELA 159

Query: 210 IDLGERLKTPKLFALTSP-LLTTASG----------TKMGKTLSGAIWLNKEMTSPYNFW 258
            D+G R         T P       G           KM K+ +        M  P    
Sbjct: 160 RDIGTRFNNSYSKTFTIPEGYVPKEGAKIMDLQDPSKKMSKSDANPNGFILIMDEPNVIR 219

Query: 259 QYW-RNIDDAD-VVSF 272
           +   R + D+  VV++
Sbjct: 220 KKISRAVTDSIGVVNY 235


>gi|153815425|ref|ZP_01968093.1| hypothetical protein RUMTOR_01660 [Ruminococcus torques ATCC 27756]
 gi|317500887|ref|ZP_07959099.1| S4 RNA-binding domain-containing protein [Lachnospiraceae bacterium
           8_1_57FAA]
 gi|331089211|ref|ZP_08338113.1| hypothetical protein HMPREF1025_01696 [Lachnospiraceae bacterium
           3_1_46FAA]
 gi|145847284|gb|EDK24202.1| hypothetical protein RUMTOR_01660 [Ruminococcus torques ATCC 27756]
 gi|316897767|gb|EFV19826.1| S4 RNA-binding domain-containing protein [Lachnospiraceae bacterium
           8_1_57FAA]
 gi|330405763|gb|EGG85292.1| hypothetical protein HMPREF1025_01696 [Lachnospiraceae bacterium
           3_1_46FAA]
          Length = 71

 Score = 37.9 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 7/49 (14%), Positives = 21/49 (42%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
              + L  ++  AGF  +  +A+  ++   + +N  + +    ++   D
Sbjct: 10  EEFIRLGQVLKAAGFVENGGQAKEVIQDGFVSVNGEVETRRGRKLYPND 58


>gi|84515938|ref|ZP_01003299.1| lysyl-tRNA synthetase [Loktanella vestfoldensis SKA53]
 gi|84510380|gb|EAQ06836.1| lysyl-tRNA synthetase [Loktanella vestfoldensis SKA53]
          Length = 524

 Score = 37.9 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 17/85 (20%), Positives = 29/85 (34%), Gaps = 6/85 (7%)

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            DF       D   +M G +   N      + E L   K    +  L    +G K+ K+ 
Sbjct: 236 PDFGARWAALDVDFEMYGKEHATNTAIYDRICEILGGRKPNHFSYELFLDENGQKISKSS 295

Query: 242 SGAIWLNKEMT------SPYNFWQY 260
              I +++ +T        Y  +Q 
Sbjct: 296 GNGISIDEWLTYAATESLSYFMYQK 320


>gi|332295067|ref|YP_004436990.1| pseudouridine synthase Rsu [Thermodesulfobium narugense DSM 14796]
 gi|332178170|gb|AEE13859.1| pseudouridine synthase Rsu [Thermodesulfobium narugense DSM 14796]
          Length = 248

 Score = 37.9 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 12/66 (18%), Positives = 28/66 (42%), Gaps = 2/66 (3%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL-QDFDSTGNIKLSFGK 408
           M +   +  +G   S  +A   + S  +++N+ +IS+   ++   +D        +   K
Sbjct: 1   MRINKFLSFSGLT-SRRKAEDLILSGKVEVNDKVISDLSYKVDPNKDVVKVNGRLVKIRK 59

Query: 409 KNHIIC 414
           K H + 
Sbjct: 60  KRHYLL 65


>gi|332185277|ref|ZP_08387026.1| hypothetical protein SUS17_350 [Sphingomonas sp. S17]
 gi|332015001|gb|EGI57057.1| hypothetical protein SUS17_350 [Sphingomonas sp. S17]
          Length = 420

 Score = 37.9 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 17/44 (38%), Gaps = 1/44 (2%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           +  L+ +AG   S  E  R +    I +N + I      +   D
Sbjct: 7   IAKLLARAG-VASRREVERMIAEGRIALNGTTIDTPATLLSSLD 49


>gi|329115789|ref|ZP_08244506.1| pseudouridine synthase B, ribosomal large subunit [Streptococcus
           parauberis NCFD 2020]
 gi|326906194|gb|EGE53108.1| pseudouridine synthase B, ribosomal large subunit [Streptococcus
           parauberis NCFD 2020]
          Length = 241

 Score = 37.9 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 19/46 (41%), Gaps = 1/46 (2%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           M +   I  AG   S  +A   +K   + IN  +++     +K  D
Sbjct: 1   MRINKFIAHAG-VASRRKAEELIKQGLVTINGQVVTELATTVKSGD 45


>gi|323447381|gb|EGB03304.1| hypothetical protein AURANDRAFT_39388 [Aureococcus anophagefferens]
          Length = 387

 Score = 37.9 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 38/218 (17%), Positives = 74/218 (33%), Gaps = 37/218 (16%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   T  SLH G+    +  +   +  +  +  +    + I  P       + + S+ + 
Sbjct: 59  GVQPTG-SLHLGNYLGAIRQWVEYQHEYDSLFCVVDMHA-ITVPH----DAKTLSSETMD 112

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCS-IKYIDLLREIGSFFSVNRMLSFESV 159
                I       I     ++         WL + I  I+ L          RM+ ++  
Sbjct: 113 AAALYIAAGVDPDIAPIFVQSHVSAHAELAWLLNCITPINWLE---------RMIQYKE- 162

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL------- 212
             + K+ + ++   F+Y +L A D +     Y   L   G DQ  ++    D+       
Sbjct: 163 -KKEKQGELVAVGLFDYPVLMAADILL----YQAGLVPVGDDQRQHLELTRDIARRFHDM 217

Query: 213 -----GERLKTPKLFAL--TSPLLTTASGT-KMGKTLS 242
                    + PK   +   S +++   GT KM K+  
Sbjct: 218 YCKRKQRVFREPKALIVKEGSRVMSLTDGTVKMSKSAP 255


>gi|269977692|ref|ZP_06184656.1| tryptophan--tRNA ligase [Mobiluncus mulieris 28-1]
 gi|269934120|gb|EEZ90690.1| tryptophan--tRNA ligase [Mobiluncus mulieris 28-1]
          Length = 381

 Score = 37.9 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 35/241 (14%), Positives = 66/241 (27%), Gaps = 46/241 (19%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN 102
            T   LH GH    +     LQ  G     L+          + RD    +   + +   
Sbjct: 53  PTG-FLHIGHYFGTLKSRVELQNLGIDTTVLIADY----QVITDRDNIGNV--REYVLNL 105

Query: 103 IEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYI-DLLREIGSFFSVNRMLSFESVRS 161
           +       ++ I                    +  I ++L    S  +   +    +V++
Sbjct: 106 VADY---LAAGIDPAKSTIFCH--------SQVPAIHEMLVIFLSLVTEAELHRNPTVKA 154

Query: 162 RLKREQ-SLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNI----ICGIDLGERL 216
            ++  Q  ++ L   Y + QA D +    N    L   G DQ  ++    +      +R 
Sbjct: 155 EMEAAQRPMTGLLLTYPVHQAADILCAQAN----LVPVGQDQLPHLEQTRVVAKRFNKRY 210

Query: 217 KTPKLFA-------LTSPL----------LTTASGTKMGKTLSGAIWLNKEMTSPYNFWQ 259
                            PL          +    G KM K+    + L           +
Sbjct: 211 PQRDAAGNKVKDSRGVLPLAQALLGRGSMILGTDGQKMSKSRHNTVELGASAEETAKIIK 270

Query: 260 Y 260
            
Sbjct: 271 K 271


>gi|227874679|ref|ZP_03992840.1| tryptophan--tRNA ligase [Mobiluncus mulieris ATCC 35243]
 gi|227844722|gb|EEJ54870.1| tryptophan--tRNA ligase [Mobiluncus mulieris ATCC 35243]
          Length = 378

 Score = 37.9 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 35/241 (14%), Positives = 66/241 (27%), Gaps = 46/241 (19%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN 102
            T   LH GH    +     LQ  G     L+          + RD    +   + +   
Sbjct: 50  PTG-FLHIGHYFGTLKSRVELQNLGIDTTVLIADY----QVITDRDNIGNV--REYVLNL 102

Query: 103 IEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYI-DLLREIGSFFSVNRMLSFESVRS 161
           +       ++ I                    +  I ++L    S  +   +    +V++
Sbjct: 103 VADY---LAAGIDPAKSTIFCH--------SQVPAIHEMLVIFLSLVTEAELHRNPTVKA 151

Query: 162 RLKREQ-SLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNI----ICGIDLGERL 216
            ++  Q  ++ L   Y + QA D +    N    L   G DQ  ++    +      +R 
Sbjct: 152 EMEAAQRPMTGLLLTYPVHQAADILCAQAN----LVPVGQDQLPHLEQTRVVAKRFNKRY 207

Query: 217 KTPKLFA-------LTSPL----------LTTASGTKMGKTLSGAIWLNKEMTSPYNFWQ 259
                            PL          +    G KM K+    + L           +
Sbjct: 208 PQRDAAGNKVKDSRGVLPLAQALLGRGSMILGTDGQKMSKSRHNTVELGASAEETAKIIK 267

Query: 260 Y 260
            
Sbjct: 268 K 268


>gi|221195455|ref|ZP_03568510.1| ribosomal protein S4 [Atopobium rimae ATCC 49626]
 gi|221184642|gb|EEE17034.1| ribosomal protein S4 [Atopobium rimae ATCC 49626]
          Length = 197

 Score = 37.9 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 11/45 (24%), Positives = 22/45 (48%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
            ++ + GFA +  EAR+ ++   I +N   +     +IK  D  +
Sbjct: 91  NVVFRLGFARTRKEARQTVRHGHITVNGQRVDIPSYRIKKGDVIA 135


>gi|167764347|ref|ZP_02436472.1| hypothetical protein BACSTE_02731 [Bacteroides stercoris ATCC
           43183]
 gi|167697752|gb|EDS14331.1| hypothetical protein BACSTE_02731 [Bacteroides stercoris ATCC
           43183]
          Length = 201

 Score = 37.9 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 8/82 (9%), Positives = 28/82 (34%), Gaps = 3/82 (3%)

Query: 320 ATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKI 379
                  F+ +  ++ + T  +    +   +    ++ + G A +   AR+ +    I +
Sbjct: 65  EKQFRNLFEKAATAKGI-TGEVLLQLLEGRLD--NVVFRLGIAPTRAAARQLVSHKHITV 121

Query: 380 NNSIISNEKLQIKLQDFDSTGN 401
           +  +++     +K         
Sbjct: 122 DGEVVNIPSYAVKPGQVIGVRE 143


>gi|71894191|ref|YP_278299.1| tryptophanyl-tRNA synthetase [Mycoplasma synoviae 53]
 gi|71850979|gb|AAZ43588.1| tryptophanyl-tRNA synthetase [Mycoplasma synoviae 53]
          Length = 330

 Score = 37.9 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 50/300 (16%), Positives = 98/300 (32%), Gaps = 50/300 (16%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   T   L  G+    +  F   +   +    +    ++         +   M ++E++
Sbjct: 8   GIKPTGD-LTLGNYLGAIKKFIKLQNNFESYIFVADLHAL---------TDSQMSAKELK 57

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFS-VNRMLSFESV 159
           EN  KI    + ++  G       +      L    +I  L    +    +NRM  F+  
Sbjct: 58  ENRRKI---IALYLASGLDPQKVNIFYQSDVLEH-GFIQWLCLCETTIGELNRMTQFKDK 113

Query: 160 RSRLKREQS---LSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL 216
             + K+  +   +      Y  L A D +     Y+  +   G DQ  ++    ++ ER 
Sbjct: 114 TEKFKQGNNTYKIPSGILAYPTLMAGDILL----YNPEIVPVGQDQTQHLELTRNIAERF 169

Query: 217 KTP--KLFALTSPLLTTAS---------GTKMGKTLS---GAIWLNKEMTSPYNFWQYW- 261
            +     F +  PLL               KM K+       I+L ++  S YN      
Sbjct: 170 NSKYKTKFNVPKPLLNEVGTKIMSLQNPDKKMSKSEGSQKATIYLLEDPQSAYNKILKAV 229

Query: 262 ------RNIDDAD-----VVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMV 310
                   + D       +++    +  L + E     K +     E K+ IA  +  ++
Sbjct: 230 TDSENKVYLSDEKKGVKNLLNIYAAINDLSLEEAAE--KFRDSNYKEFKEAIAESVKALL 287


>gi|331701399|ref|YP_004398358.1| pseudouridine synthase Rsu [Lactobacillus buchneri NRRL B-30929]
 gi|329128742|gb|AEB73295.1| pseudouridine synthase Rsu [Lactobacillus buchneri NRRL B-30929]
          Length = 242

 Score = 37.9 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 10/55 (18%), Positives = 21/55 (38%), Gaps = 1/55 (1%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
           L  +I  AG   S  +A   +    +K+N  ++     ++   D      + +S 
Sbjct: 6   LQKVIAHAG-VASRRKAEELIAKGHVKVNGEVVKELGTKVTPNDEVKVDEVPISK 59


>gi|227889866|ref|ZP_04007671.1| pseudouridylate synthase [Lactobacillus johnsonii ATCC 33200]
 gi|227849730|gb|EEJ59816.1| pseudouridylate synthase [Lactobacillus johnsonii ATCC 33200]
          Length = 244

 Score = 37.9 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 9/44 (20%), Positives = 22/44 (50%), Gaps = 1/44 (2%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           L  +I +AG A S  +A + + +  + +N   ++    +++  D
Sbjct: 10  LQKVIAQAGIA-SRRKAEKMITAGQVTVNGKKVTELGTKVEPSD 52


>gi|199597503|ref|ZP_03210932.1| Ribosomal protein S4 [Lactobacillus rhamnosus HN001]
 gi|199591526|gb|EDY99603.1| Ribosomal protein S4 [Lactobacillus rhamnosus HN001]
          Length = 203

 Score = 37.9 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 7/48 (14%), Positives = 19/48 (39%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
            L+ + G A+S  +AR+ +    I ++   +     +++         
Sbjct: 97  NLVFRLGLASSRPQARQLVNHGHITVDGKRLDIPSYEVQPGQVIGLRE 144


>gi|118595134|ref|ZP_01552481.1| tryptophanyl-tRNA synthetase [Methylophilales bacterium HTCC2181]
 gi|118440912|gb|EAV47539.1| tryptophanyl-tRNA synthetase [Methylophilales bacterium HTCC2181]
          Length = 400

 Score = 37.9 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 32/195 (16%), Positives = 67/195 (34%), Gaps = 25/195 (12%)

Query: 84  PSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLRE 143
           P+++D+  + + S+++         +  S        T   +         + +I+  RE
Sbjct: 109 PTYKDQQEK-LTSKDLSTYGFLGYPLLQSADILIYKATQVPVGE-----DQVPHIEFTRE 162

Query: 144 IGSFFS------VNRMLSFESVRSRLKREQSLSFLEF--NYMIL---QAYDFVELAKNYD 192
           +   F+      V      E    +L  ++   + E    Y      QA +  +      
Sbjct: 163 VARRFNHLYGKEVGYEEKAEDAIKKLGSKKGQLYRELKTVYQEEGDDQALEAAQALIEEQ 222

Query: 193 CRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPL--LTTASGTKMGKTLSGAIWLNKE 250
             L +G  ++    + G   G+ +     + LT P   +    G KM K+ +  I L +E
Sbjct: 223 QNLSLGDKERLLGFLEGG--GKMILVEPEYKLT-PASKMIGLDGQKMSKSYNNTISLREE 279

Query: 251 MTSPYNFWQYWRNID 265
              P    +  R + 
Sbjct: 280 ---PKEVEKKIRTMP 291


>gi|34499170|ref|NP_903385.1| tryptophanyl-tRNA synthetase II [Chromobacterium violaceum ATCC
           12472]
 gi|34105021|gb|AAQ61377.1| tryptophanyl-tRNA synthetase [Chromobacterium violaceum ATCC 12472]
          Length = 340

 Score = 37.9 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 36/232 (15%), Positives = 68/232 (29%), Gaps = 47/232 (20%)

Query: 43  DLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMR-SQEIQE 101
           D T   LH GH    +    + +       L+    ++       D     ++    + +
Sbjct: 16  DRTTGQLHLGHYVGSLRNRVILQERCAQFLLLADAQAL------TDNMGNYLKVRDNVLQ 69

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFF----SVNRM---- 153
                  +          K+   +            +  L E+ S++    +V R+    
Sbjct: 70  VALDYLAVG-----IDPAKSTIFI---------QSLVPELTELASYYLNLVTVARLERNP 115

Query: 154 LSFESVRSR-LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL 212
              + ++ R  +R+    FL   Y   QA D       +   +   G DQ   I    ++
Sbjct: 116 TIKDEIKQRGYERDIPAGFL--TYPAAQAADITA----FKATIVPVGDDQIPMIEQTNEI 169

Query: 213 GERLK---TPKLFALTSPL-------LTTASGT-KMGKTLSGAIWLNKEMTS 253
             R        +   T  +       L    G  KM K+L   I L+     
Sbjct: 170 VRRFNASVDQPVLVETRAVVPEVGSRLPGIDGKAKMSKSLGNTITLSASPDD 221


>gi|328463108|gb|EGF34871.1| 30S ribosomal protein S4 [Lactobacillus rhamnosus MTCC 5462]
          Length = 203

 Score = 37.9 bits (87), Expect = 3.3,   Method: Composition-based stats.
 Identities = 8/48 (16%), Positives = 20/48 (41%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
            L+ + G A+S  +AR+ +    I ++   +     +++L        
Sbjct: 97  NLVFRLGLASSRPQARQLVNHGHITVDGKRLDIPSYEVQLGQVIGLRE 144


>gi|309378416|emb|CBX22969.1| unnamed protein product [Neisseria lactamica Y92-1009]
          Length = 77

 Score = 37.9 bits (87), Expect = 3.3,   Method: Composition-based stats.
 Identities = 10/53 (18%), Positives = 22/53 (41%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
           E +  + L  L+  AG A S  +A+  +    +  N    + +  +I+  +  
Sbjct: 8   EDNEYIALCDLLKLAGLAESGGQAKAFIAEGLVLRNGETETRKTAKIRGGEVI 60


>gi|302036692|ref|YP_003797014.1| 30S ribosomal protein S4 [Candidatus Nitrospira defluvii]
 gi|300604756|emb|CBK41088.1| 30S ribosomal protein S4 [Candidatus Nitrospira defluvii]
          Length = 208

 Score = 37.9 bits (87), Expect = 3.3,   Method: Composition-based stats.
 Identities = 16/102 (15%), Positives = 38/102 (37%), Gaps = 14/102 (13%)

Query: 294 EINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLL 353
           ++ E +K+        ++G +E +         F+ +     +   ++ +    R   ++
Sbjct: 56  QLREKQKL------KRIYGLQECQ-----FRGIFERAERQAGVTGDTLLRLLECRLDNVV 104

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
               + GF  S  EAR+ +    + IN   +      +K  D
Sbjct: 105 Y---RLGFGASRKEARQLVNHGHMMINGRKVKAPGALVKAGD 143


>gi|238809887|dbj|BAH69677.1| hypothetical protein [Mycoplasma fermentans PG18]
          Length = 339

 Score = 37.9 bits (87), Expect = 3.3,   Method: Composition-based stats.
 Identities = 43/293 (14%), Positives = 96/293 (32%), Gaps = 46/293 (15%)

Query: 41  GYDLTASSLHAGHLTQ----LMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRS 96
           G   T   L  G+        + L       +  ++ +   T+   DP    ++RR    
Sbjct: 15  GIKPTGD-LTLGNYIGALRNFVKLQENYDEAYYFVADLHALTTGYVDPKELYQARR---- 69

Query: 97  QEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSF 156
           + +   +        S I Y +   +  +     WL + +         S   ++RM  F
Sbjct: 70  EIVTMYLACGLDPKKSTIFYQSDVVEHTL---AQWLMTTEI--------SIGELSRMTQF 118

Query: 157 ESVRSRLKREQS----LSFLEFNYMILQA-------YDFVELAKNYDCRLQMGGS----- 200
           +    ++ ++ +    +      Y +L A        DFV + ++    L++  +     
Sbjct: 119 KDKSQKMSKQANGTEKIPVGLLMYPVLMAADILIYNPDFVPIGEDQKQHLELARTIAERL 178

Query: 201 --DQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFW 258
             D   N      +   +   ++ +LT P        KM K+  G          P   +
Sbjct: 179 NRDYKTNFKLAEGIIPPVG-ARIMSLTDPT------KKMSKSDKGTKATIYLHDDPEVAY 231

Query: 259 QYWR-NIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMV 310
           +    ++ D++   +        ++ ++  A L  K + EA+K    +     
Sbjct: 232 KKIMKSVTDSENKVYISEDKPGVLNLLNIYASLTNKTLKEAEKEFKDKDYAQF 284


>gi|227497605|ref|ZP_03927826.1| conserved hypothetical protein [Actinomyces urogenitalis DSM 15434]
 gi|226832931|gb|EEH65314.1| conserved hypothetical protein [Actinomyces urogenitalis DSM 15434]
          Length = 102

 Score = 37.9 bits (87), Expect = 3.3,   Method: Composition-based stats.
 Identities = 9/46 (19%), Positives = 19/46 (41%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           + L   +  AG      EAR  ++S  +++N  + +     +   D
Sbjct: 26  IKLGQFLKLAGLVEDGAEARIAIQSGDVRVNGEVETRRGHHLAAGD 71


>gi|254510491|ref|ZP_05122558.1| lysyl-tRNA synthetase [Rhodobacteraceae bacterium KLH11]
 gi|221534202|gb|EEE37190.1| lysyl-tRNA synthetase [Rhodobacteraceae bacterium KLH11]
          Length = 524

 Score = 37.9 bits (87), Expect = 3.3,   Method: Composition-based stats.
 Identities = 14/85 (16%), Positives = 24/85 (28%), Gaps = 6/85 (7%)

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            DF           +M G +   N      +   L        +  L    +G K+ K+ 
Sbjct: 236 PDFGARWAALGVDFEMYGKEHATNEKIYDAICRALGGRAPEHFSYELFLDENGQKISKSS 295

Query: 242 SGAI----WLN--KEMTSPYNFWQY 260
              +    WL      +  Y  +Q 
Sbjct: 296 GNGVSIDEWLTYAPTESLAYFMYQK 320


>gi|218131301|ref|ZP_03460105.1| hypothetical protein BACEGG_02912 [Bacteroides eggerthii DSM 20697]
 gi|317476331|ref|ZP_07935580.1| ribosomal protein S4 [Bacteroides eggerthii 1_2_48FAA]
 gi|217986518|gb|EEC52854.1| hypothetical protein BACEGG_02912 [Bacteroides eggerthii DSM 20697]
 gi|316907357|gb|EFV29062.1| ribosomal protein S4 [Bacteroides eggerthii 1_2_48FAA]
          Length = 201

 Score = 37.9 bits (87), Expect = 3.3,   Method: Composition-based stats.
 Identities = 8/82 (9%), Positives = 28/82 (34%), Gaps = 3/82 (3%)

Query: 320 ATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKI 379
                  F+ +  ++ + T  +    +   +    ++ + G A +   AR+ +    I +
Sbjct: 65  EKQFRNLFEKAATAKGI-TGEVLLQLLEGRLD--NVVFRLGIAPTRAAARQLVSHKHITV 121

Query: 380 NNSIISNEKLQIKLQDFDSTGN 401
           +  +++     +K         
Sbjct: 122 DGEVVNIPSYAVKPGQVIGVRE 143


>gi|190571013|ref|YP_001975371.1| lysyl-tRNA synthetase [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
 gi|213019534|ref|ZP_03335340.1| lysyl-tRNA synthetase [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
 gi|190357285|emb|CAQ54713.1| lysyl-tRNA synthetase [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
 gi|212994956|gb|EEB55598.1| lysyl-tRNA synthetase [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
          Length = 525

 Score = 37.9 bits (87), Expect = 3.3,   Method: Composition-based stats.
 Identities = 12/83 (14%), Positives = 23/83 (27%), Gaps = 4/83 (4%)

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            D+      +    +  G D   + +    + + L           L     G K+ K+ 
Sbjct: 237 PDWGMRWSAFGVNYEAHGKDLTPSAVLSSQICKILGEKPPLLFCYELFLDKEGKKISKSK 296

Query: 242 SGAI----WLNKEMTSPYNFWQY 260
              I    WL    T     + +
Sbjct: 297 GNGISIEEWLTYAPTESLALYIF 319


>gi|331701066|ref|YP_004398025.1| RNA-binding S4 domain-containing protein [Lactobacillus buchneri
           NRRL B-30929]
 gi|329128409|gb|AEB72962.1| RNA-binding S4 domain protein [Lactobacillus buchneri NRRL B-30929]
          Length = 263

 Score = 37.9 bits (87), Expect = 3.3,   Method: Composition-based stats.
 Identities = 16/66 (24%), Positives = 28/66 (42%), Gaps = 10/66 (15%)

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDST---GNIKLS---- 405
           +  +V  GF  S + A+  ++   I+IN    +   L+I +QD  S    G + +     
Sbjct: 186 VDALVSEGFHISRHHAKELIEGGMIRINWEDANRPDLEISIQDIISVRGFGRLVVQDIAG 245

Query: 406 ---FGK 408
               GK
Sbjct: 246 MTKKGK 251


>gi|323491918|ref|ZP_08097088.1| 16S rRNA uridine-516 pseudouridylate synthase [Vibrio brasiliensis
           LMG 20546]
 gi|323313839|gb|EGA66933.1| 16S rRNA uridine-516 pseudouridylate synthase [Vibrio brasiliensis
           LMG 20546]
          Length = 342

 Score = 37.9 bits (87), Expect = 3.3,   Method: Composition-based stats.
 Identities = 13/49 (26%), Positives = 20/49 (40%), Gaps = 2/49 (4%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
             G  L   I + GF  S  EA R ++   + IN   I     +++  D
Sbjct: 4   DTGKRLNKFISETGFC-SRREADRLIEQGRVTING-KIPEMGTKVQSGD 50


>gi|320581194|gb|EFW95415.1| Mitochondrial ribosomal component of the small subunit [Pichia
           angusta DL-1]
          Length = 476

 Score = 37.9 bits (87), Expect = 3.3,   Method: Composition-based stats.
 Identities = 23/125 (18%), Positives = 43/125 (34%), Gaps = 16/125 (12%)

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIV- 357
           +K  + + T   HG    E      ++ F   +        S+S         +L     
Sbjct: 44  QKWDSKQKTRGYHGEHIPEG---RWLKLFQKKLDGVAQMDASLSGKANDETPMVLQTFAV 100

Query: 358 ----------KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD-FDSTGNIKLSF 406
                     +A FA+S  +AR+ + +  +K+N   I +    +   D F    +  L  
Sbjct: 101 LEKRLDVAVFRAMFASSVRQARQFILAGDVKVNGVPIKHPSYPLSPGDVFSVEPDRVLQA 160

Query: 407 -GKKN 410
            G+K 
Sbjct: 161 LGEKK 165


>gi|303233180|ref|ZP_07319853.1| ribosomal protein S4 [Atopobium vaginae PB189-T1-4]
 gi|302480765|gb|EFL43852.1| ribosomal protein S4 [Atopobium vaginae PB189-T1-4]
          Length = 176

 Score = 37.9 bits (87), Expect = 3.3,   Method: Composition-based stats.
 Identities = 12/45 (26%), Positives = 23/45 (51%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
            ++ + GFA +  EAR+ ++   I +N   +     Q+K QD  +
Sbjct: 70  NVVFRLGFARTRKEARQTVRHGHITVNGKRVDIPSYQVKAQDVIA 114


>gi|149184427|ref|ZP_01862745.1| hypothetical protein ED21_26953 [Erythrobacter sp. SD-21]
 gi|148831747|gb|EDL50180.1| hypothetical protein ED21_26953 [Erythrobacter sp. SD-21]
          Length = 255

 Score = 37.9 bits (87), Expect = 3.3,   Method: Composition-based stats.
 Identities = 7/46 (15%), Positives = 20/46 (43%), Gaps = 1/46 (2%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
             G  +  L+ +AG   S  E  R +    + ++  ++    ++++
Sbjct: 8   EAGDRIAKLLARAG-VASRREIERMIADGRVSLDGKVLDTPAVKLE 52


>gi|313677145|ref|YP_004055141.1| SSU ribosomal protein s4p [Marivirga tractuosa DSM 4126]
 gi|312943843|gb|ADR23033.1| SSU ribosomal protein S4P [Marivirga tractuosa DSM 4126]
          Length = 201

 Score = 37.9 bits (87), Expect = 3.3,   Method: Composition-based stats.
 Identities = 13/82 (15%), Positives = 29/82 (35%), Gaps = 3/82 (3%)

Query: 320 ATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKI 379
                  FD +   + + T  +    +   +    ++ + G A +   AR+ +    I +
Sbjct: 65  EKQFANLFDKASRKKGI-TGEVLLQLLESRLD--NVVFRLGIAPTRRAARQLVGHKHILV 121

Query: 380 NNSIISNEKLQIKLQDFDSTGN 401
           N  I++    Q+K  D      
Sbjct: 122 NGEILNIPSYQVKESDVIGVRE 143


>gi|302878407|ref|YP_003846971.1| pseudouridine synthase [Gallionella capsiferriformans ES-2]
 gi|302581196|gb|ADL55207.1| pseudouridine synthase [Gallionella capsiferriformans ES-2]
          Length = 302

 Score = 37.9 bits (87), Expect = 3.3,   Method: Composition-based stats.
 Identities = 11/70 (15%), Positives = 29/70 (41%), Gaps = 2/70 (2%)

Query: 342 SKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
           ++ +   G  L  ++ +AGF  S       + +  + +N    +   +++   D   T  
Sbjct: 8   AEYQPEAGEKLQKVLAQAGF-GSRRNMEEWIAAGRVSVNGEPAT-LGMRVVPGDLVKTER 65

Query: 402 IKLSFGKKNH 411
             +  G+++H
Sbjct: 66  RTIRVGERDH 75


>gi|45359155|ref|NP_988712.1| tryptophanyl-tRNA synthetase [Methanococcus maripaludis S2]
 gi|45048030|emb|CAF31148.1| Tryptophanyl-tRNA synthetase [Methanococcus maripaludis S2]
          Length = 358

 Score = 37.9 bits (87), Expect = 3.3,   Method: Composition-based stats.
 Identities = 44/270 (16%), Positives = 87/270 (32%), Gaps = 35/270 (12%)

Query: 6   SDFLSILSE------RGFIHQISNPRELDILCSQGV-VTAYIGYDLTASSLHAGHLTQLM 58
           S+ +  L E      RG +    + +++    + G   T   G   +   +H GH   + 
Sbjct: 26  SEIVKTLKEPHNFMKRGIVFGHRDFQKIADAMNNGKDFTVVSGMMPSGK-MHFGHKMVVD 84

Query: 59  LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT 118
            L + QK G      +    +        + ++++            I+   +++I  G 
Sbjct: 85  QLLYYQKYGADIYIPIADLEAYWARGMDFETTKKL-----------AIEEYITNYIALGL 133

Query: 119 GKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMI 178
                 +        +    DL   +    +   M            E ++    F   +
Sbjct: 134 DPEKIHVYLQS---KNETVKDLAMRLSKRVNFTEM--KGIYG--FSGETNIG-HVFA-PV 184

Query: 179 LQAYDFVE-LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFA---LTSPLLTTASG 234
           +Q  D +    +     +   G DQ  +I    D+  R K  K  A        +T   G
Sbjct: 185 VQVADILHPQLEKKVPVVVPVGIDQDPHIRLTRDIAGRYKDFKFIAPSSTYHRFITGLLG 244

Query: 235 TKMGKTLSG-AIWLNKEMTSPYNFWQYWRN 263
            KM  +    AI+L+ E T   +F +   +
Sbjct: 245 GKMSSSKPETAIYLSDEPTK--SFKKKVMS 272


>gi|309390250|gb|ADO78130.1| SSU ribosomal protein S4P [Halanaerobium praevalens DSM 2228]
          Length = 198

 Score = 37.9 bits (87), Expect = 3.4,   Method: Composition-based stats.
 Identities = 14/42 (33%), Positives = 21/42 (50%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
            L+ +AGFA S  +AR+ +    I +N   I      IK+ D
Sbjct: 92  NLVYRAGFARSIRQARQMVVHGHILVNGKKIDIPSYAIKIGD 133


>gi|258508250|ref|YP_003171001.1| 30S ribosomal protein S4P [Lactobacillus rhamnosus GG]
 gi|258539461|ref|YP_003173960.1| 30S ribosomal protein S4P [Lactobacillus rhamnosus Lc 705]
 gi|257148177|emb|CAR87150.1| SSU/30S ribosomal protein S4P [Lactobacillus rhamnosus GG]
 gi|257151137|emb|CAR90109.1| SSU/30S ribosomal protein S4P [Lactobacillus rhamnosus Lc 705]
 gi|259649567|dbj|BAI41729.1| 30S ribosomal protein S4 [Lactobacillus rhamnosus GG]
          Length = 203

 Score = 37.9 bits (87), Expect = 3.4,   Method: Composition-based stats.
 Identities = 7/48 (14%), Positives = 19/48 (39%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
            L+ + G A+S  +AR+ +    I ++   +     +++         
Sbjct: 97  NLVFRLGLASSRPQARQLVNHGHITVDGKRLDIPSYEVQPGQVIGLRE 144


>gi|154484655|ref|ZP_02027103.1| hypothetical protein EUBVEN_02372 [Eubacterium ventriosum ATCC
           27560]
 gi|149734503|gb|EDM50420.1| hypothetical protein EUBVEN_02372 [Eubacterium ventriosum ATCC
           27560]
          Length = 245

 Score = 37.9 bits (87), Expect = 3.4,   Method: Composition-based stats.
 Identities = 14/62 (22%), Positives = 24/62 (38%), Gaps = 2/62 (3%)

Query: 342 SKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSI-ISNEKLQIKLQDFDSTG 400
            K      + L   +  AG+  S  EA R ++   +K+N    +  +K+ I         
Sbjct: 9   EKKSADEQIRLNKFLSDAGYC-SRREADRLVEQGVVKVNGKTAVMGQKVTINDSIMVKGK 67

Query: 401 NI 402
           NI
Sbjct: 68  NI 69


>gi|325969826|ref|YP_004246018.1| tryptophanyl-tRNA synthetase [Vulcanisaeta moutnovskia 768-28]
 gi|323709029|gb|ADY02516.1| tryptophanyl-tRNA synthetase [Vulcanisaeta moutnovskia 768-28]
          Length = 356

 Score = 37.9 bits (87), Expect = 3.4,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 21/63 (33%), Gaps = 2/63 (3%)

Query: 12 LSERGFIHQISNPRELDILCSQG-VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
          L  R F +   + + +      G     Y G   +A  LH GHL   ML  W     +  
Sbjct: 30 LIRRNFFYAHRDLQSILNRQRNGLKWALYNGRGPSAD-LHIGHLVPWMLSKWFVDKFNVD 88

Query: 71 ISL 73
             
Sbjct: 89 YFF 91


>gi|156841017|ref|XP_001643885.1| hypothetical protein Kpol_495p25 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156114513|gb|EDO16027.1| hypothetical protein Kpol_495p25 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 432

 Score = 37.9 bits (87), Expect = 3.4,   Method: Composition-based stats.
 Identities = 13/47 (27%), Positives = 22/47 (46%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           LD+         Y G   ++ S+H GH+T  +   WLQ+    P+ +
Sbjct: 95  LDLYEQGKPFFLYTGRGPSSDSMHMGHMTPFIFTKWLQEVFDVPLVI 141


>gi|296129454|ref|YP_003636704.1| RNA-binding S4 domain protein [Cellulomonas flavigena DSM 20109]
 gi|296021269|gb|ADG74505.1| RNA-binding S4 domain protein [Cellulomonas flavigena DSM 20109]
          Length = 76

 Score = 37.9 bits (87), Expect = 3.4,   Method: Composition-based stats.
 Identities = 10/49 (20%), Positives = 17/49 (34%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
              + L   +     A S   AR  L   A+ +N    +    Q++  D
Sbjct: 11  DDPIRLGQFLKLVNLAESGGHARALLDDGAVTVNGEPETRRGRQLRPGD 59


>gi|227891072|ref|ZP_04008877.1| 30S ribosomal protein S4 [Lactobacillus salivarius ATCC 11741]
 gi|227866946|gb|EEJ74367.1| 30S ribosomal protein S4 [Lactobacillus salivarius ATCC 11741]
          Length = 201

 Score = 37.9 bits (87), Expect = 3.4,   Method: Composition-based stats.
 Identities = 6/48 (12%), Positives = 20/48 (41%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
            ++ + G A++  +AR+ +    I ++   +     +++     S   
Sbjct: 97  NVVYRLGLASTRRQARQLVNHGHITVDGKRVDIPSYEVEPGQVISLRE 144


>gi|227496094|ref|ZP_03926400.1| possible pseudouridine synthase Rsu [Actinomyces urogenitalis DSM
           15434]
 gi|226834328|gb|EEH66711.1| possible pseudouridine synthase Rsu [Actinomyces urogenitalis DSM
           15434]
          Length = 325

 Score = 37.9 bits (87), Expect = 3.4,   Method: Composition-based stats.
 Identities = 10/81 (12%), Positives = 27/81 (33%), Gaps = 9/81 (11%)

Query: 314 EEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLK 373
           +E E+A   A         +            V+ G  L  ++  AG   S       + 
Sbjct: 48  DEDEEARIVAERERAGRGGADD--------PYVATGERLQKVLAHAG-VASRRACEEIIA 98

Query: 374 SNAIKINNSIISNEKLQIKLQ 394
           +  + ++  +++   +++   
Sbjct: 99  AGRVSVDGVVVTEPGVRVDPS 119


>gi|219115295|ref|XP_002178443.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217410178|gb|EEC50108.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 252

 Score = 37.9 bits (87), Expect = 3.4,   Method: Composition-based stats.
 Identities = 9/61 (14%), Positives = 23/61 (37%), Gaps = 1/61 (1%)

Query: 346 VSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLS 405
           +   + L  L+   G+  S  EA R ++   +K+N  +  + ++            + + 
Sbjct: 4   LGVSIRLNKLLAHQGWC-SRREANRFIEQGLVKVNGVVSRDARVAPTDTVELLPQAVTVQ 62

Query: 406 F 406
            
Sbjct: 63  A 63


>gi|190893225|ref|YP_001979767.1| RNA-pseudouridine synthase, ribosomal large subunit B [Rhizobium
           etli CIAT 652]
 gi|190698504|gb|ACE92589.1| RNA-pseudouridine synthase protein, ribosomal large subunit B
           [Rhizobium etli CIAT 652]
          Length = 267

 Score = 37.9 bits (87), Expect = 3.4,   Method: Composition-based stats.
 Identities = 9/54 (16%), Positives = 24/54 (44%), Gaps = 1/54 (1%)

Query: 340 SISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL 393
            ++ D   + + L   + K G+  S  +A R +  + + I+   +++    + L
Sbjct: 15  KLTADAAGKRVTLPRALSKLGYC-SRTQAERLIAESRVSIDGRTVNDPSAWVDL 67


>gi|188990913|ref|YP_001902923.1| hypothetical protein xccb100_1517 [Xanthomonas campestris pv.
           campestris str. B100]
 gi|167732673|emb|CAP50867.1| conserved hypothetical protein [Xanthomonas campestris pv.
           campestris]
          Length = 131

 Score = 37.9 bits (87), Expect = 3.4,   Method: Composition-based stats.
 Identities = 10/66 (15%), Positives = 26/66 (39%)

Query: 341 ISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG 400
           +  D     + L  L+  AG A S  + +  + S A+ ++      +  +I+        
Sbjct: 55  LEFDLDGEYIELNQLLKLAGIADSGGQGKAIVASGAVSVDGVQELRKTAKIRPGQLVQLD 114

Query: 401 NIKLSF 406
           ++++  
Sbjct: 115 DVEIRV 120


>gi|15677662|ref|NP_274823.1| hypothetical protein NMB1826 [Neisseria meningitidis MC58]
 gi|7227080|gb|AAF42161.1| conserved hypothetical protein [Neisseria meningitidis MC58]
 gi|316984429|gb|EFV63402.1| S4 RNA-binding domain protein [Neisseria meningitidis H44/76]
          Length = 123

 Score = 37.9 bits (87), Expect = 3.4,   Method: Composition-based stats.
 Identities = 12/94 (12%), Positives = 32/94 (34%), Gaps = 1/94 (1%)

Query: 304 TEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFAT 363
           TE    +H R              +      ++   ++  ++ +  + L  L+   G A 
Sbjct: 14  TEQAVRIHRRFFGNFGYGGGRCYNNGLFLQGNIMEATVYLED-NEYIALCDLLKLVGLAE 72

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
           S  +A+  +    +  N    + +  +I+  +  
Sbjct: 73  SGGQAKAFIAEGLVLRNGETETRKTAKIRGGEVI 106


>gi|57241991|ref|ZP_00369931.1| leucyl-tRNA synthetase [Campylobacter upsaliensis RM3195]
 gi|57017183|gb|EAL53964.1| leucyl-tRNA synthetase [Campylobacter upsaliensis RM3195]
          Length = 808

 Score = 37.9 bits (87), Expect = 3.4,   Method: Composition-based stats.
 Identities = 21/159 (13%), Positives = 45/159 (28%), Gaps = 31/159 (19%)

Query: 210 IDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADV 269
            DLG          L +  +    G KM K+    +       +P +  + +     AD 
Sbjct: 552 RDLGYLEDDEPFSRLLTQGMVLKDGAKMSKSKGNVV-------NPDDIIKKY----GADT 600

Query: 270 VSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDM 329
                     P  E++                 A      ++ R                
Sbjct: 601 ARLFILFAAPPAKELEWNDDALEG---------AYRFIVRLYDR-----------ALKLE 640

Query: 330 SIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEA 368
           S   + +  +++SK+E    + +   + K+    + + A
Sbjct: 641 SGALEEISQVTLSKEEKYARLKVYEALKKSQEVYTKSFA 679


>gi|323449869|gb|EGB05754.1| hypothetical protein AURANDRAFT_70285 [Aureococcus anophagefferens]
          Length = 342

 Score = 37.9 bits (87), Expect = 3.4,   Method: Composition-based stats.
 Identities = 33/218 (15%), Positives = 70/218 (32%), Gaps = 37/218 (16%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   T  SLH G+    +  +   +  +  +  +    +I      +      +  + + 
Sbjct: 13  GVQPTG-SLHLGNYLGAIRQWVEYQHEYDSLFCVVDLHAITMPHDAKS-----LSRETLD 66

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCS-IKYIDLLREIGSFFSVNRMLSFESV 159
                I       I     ++         WL + +  ++ L          RM+ ++  
Sbjct: 67  AAALYIAAGVEPDIAPIFVQSHVSAHAELAWLLNCMTPMNWLE---------RMIQYKE- 116

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT- 218
             + K+ ++++   F+Y +L A D +     Y   L   G DQ  ++    D+  R    
Sbjct: 117 -KKQKQGENVAVGLFDYPVLMAADILL----YQADLVPVGEDQRQHLELTRDIARRFHDL 171

Query: 219 -----PKLFALTSPLLTTA--------SGT-KMGKTLS 242
                 ++F     L+            G  KM K+  
Sbjct: 172 YCKRKRRVFREPKALIVKEGARVMSLADGKAKMSKSAP 209


>gi|259508164|ref|ZP_05751064.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
 gi|259164253|gb|EEW48807.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
          Length = 96

 Score = 37.9 bits (87), Expect = 3.4,   Method: Composition-based stats.
 Identities = 8/60 (13%), Positives = 21/60 (35%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
              + L   I  A   ++  EA+  + +  + +N  + +     ++  D    G+     
Sbjct: 10  DEAIKLGQFIKLANLVSTGGEAKDAIANGDVTVNGEVDTRRGRTLRNGDVVCIGDTCAQV 69


>gi|254441292|ref|ZP_05054785.1| pseudouridine synthase, RluA family [Octadecabacter antarcticus
           307]
 gi|198251370|gb|EDY75685.1| pseudouridine synthase, RluA family [Octadecabacter antarcticus
           307]
          Length = 344

 Score = 37.9 bits (87), Expect = 3.4,   Method: Composition-based stats.
 Identities = 6/32 (18%), Positives = 17/32 (53%)

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           S +   R L   A+++N +++++ + +    D
Sbjct: 33  SRSRLMRLLADGAVQVNGAVVTDPRAKPVEGD 64


>gi|194337843|ref|YP_002019637.1| tryptophanyl-tRNA synthetase [Pelodictyon phaeoclathratiforme BU-1]
 gi|194310320|gb|ACF45020.1| tryptophanyl-tRNA synthetase [Pelodictyon phaeoclathratiforme BU-1]
          Length = 348

 Score = 37.9 bits (87), Expect = 3.4,   Method: Composition-based stats.
 Identities = 25/110 (22%), Positives = 41/110 (37%), Gaps = 21/110 (19%)

Query: 167 QSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT-------P 219
           +SL +    Y +LQA D + L K     +   G DQ  ++    ++  +           
Sbjct: 128 ESLVYGHLGYPVLQAADIL-LYKGNVVPV---GEDQIPHVEITREVARKFNNHFPHPLLG 183

Query: 220 KLFALTSPLLTTA------SGT-KMGKTLSGAIWLNKEMTSPYNFWQYWR 262
           ++FA   P +T         G  KM K+L   I L+     P    +  R
Sbjct: 184 EVFAEPEPKITKFSRLVGLDGKAKMSKSLGNTILLS---DGPEEVLKKMR 230


>gi|320335497|ref|YP_004172208.1| 30S ribosomal protein S4 [Deinococcus maricopensis DSM 21211]
 gi|319756786|gb|ADV68543.1| ribosomal protein S4 [Deinococcus maricopensis DSM 21211]
          Length = 205

 Score = 37.9 bits (87), Expect = 3.5,   Method: Composition-based stats.
 Identities = 12/78 (15%), Positives = 32/78 (41%), Gaps = 3/78 (3%)

Query: 320 ATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKI 379
                  F+    + ++P ++ +         L  +I + G A++  +AR+ +    I +
Sbjct: 68  EKQFRNLFEE---AANIPGVTGTVFLQFLERRLDNVIFRLGIASTRRQARQFVAHGHILV 124

Query: 380 NNSIISNEKLQIKLQDFD 397
           N  ++     ++K+ D  
Sbjct: 125 NGKLLDVPSYRVKIGDVI 142


>gi|329667453|gb|AEB93401.1| ribosomal large subunit pseudouridine synthase B [Lactobacillus
           johnsonii DPC 6026]
          Length = 239

 Score = 37.9 bits (87), Expect = 3.5,   Method: Composition-based stats.
 Identities = 8/44 (18%), Positives = 21/44 (47%), Gaps = 1/44 (2%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           L  +I +AG   S  +A + + +  + +N   ++    +++  D
Sbjct: 5   LQKVIAQAG-VASRRKAEKMISAGQVTVNGKKVTELGTKVEPSD 47


>gi|315304365|ref|ZP_07874675.1| tryptophan--tRNA ligase [Listeria ivanovii FSL F6-596]
 gi|313627260|gb|EFR96083.1| tryptophan--tRNA ligase [Listeria ivanovii FSL F6-596]
          Length = 331

 Score = 37.9 bits (87), Expect = 3.5,   Method: Composition-based stats.
 Identities = 39/251 (15%), Positives = 79/251 (31%), Gaps = 49/251 (19%)

Query: 143 EIGSFFSVNRMLSFES----------VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYD 192
           E+ +      +L               + +   +  +S     Y  L A D + L +   
Sbjct: 83  EVAAHAQAAWILQCNVYIGELERMTQFKDKSDGKAGVSAGLLTYPPLMAADIL-LYQTNL 141

Query: 193 CRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-----------TKMGKT- 240
             +   G DQ  +I    D+ ER         T P +                 KM K+ 
Sbjct: 142 VPV---GEDQKQHIELTRDIAERFNKKHADIFTMPEVFIPKQGARVMSLQDPTKKMSKSD 198

Query: 241 --LSGAIWLNKEMTSPYNFWQYWRN-IDDAD------------VVSFAKRLTTLPMSEID 285
             L  AI+L   +  P    +  ++ + D+             + +     + +    I 
Sbjct: 199 ANLKNAIFL---LDPPATITKKIKSAVTDSSGIIEYNKEEKPGISNLLTIYSVITGETIA 255

Query: 286 RMAKL-QGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFD----MSIHSQHMPTIS 340
            + +   GK   + K  +A  +   +   +E   A   + E  D     +  +  +   +
Sbjct: 256 GIEEKYAGKGYGDFKTDLAEIVVAELSPIQERYHAYLESDELDDILDAGAEKAAQVANKT 315

Query: 341 ISKDEVSRGMG 351
           + K E + G+G
Sbjct: 316 LKKMENAIGLG 326


>gi|271964887|ref|YP_003339083.1| 30S ribosomal protein S4 [Streptosporangium roseum DSM 43021]
 gi|270508062|gb|ACZ86340.1| 30S ribosomal protein S4 [Streptosporangium roseum DSM 43021]
          Length = 204

 Score = 37.9 bits (87), Expect = 3.5,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 22/47 (46%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
           L +L+++AG A S   AR+++    I ++   +      +K     +
Sbjct: 95  LASLVLRAGLAPSIYAARQYVTHGHITVDGRKVDIPSYLVKPGQVIA 141


>gi|170748043|ref|YP_001754303.1| lysyl-tRNA synthetase [Methylobacterium radiotolerans JCM 2831]
 gi|170654565|gb|ACB23620.1| lysyl-tRNA synthetase [Methylobacterium radiotolerans JCM 2831]
          Length = 568

 Score = 37.9 bits (87), Expect = 3.5,   Method: Composition-based stats.
 Identities = 11/86 (12%), Positives = 24/86 (27%), Gaps = 2/86 (2%)

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            D+           +M G D   ++     +   L           L     G K+ K+ 
Sbjct: 247 PDWAMRWVALGVDYEMAGKDLIDSVKLSAKIARALGGEPPEGFNYELFLDEKGQKISKSK 306

Query: 242 SGAIWLNK--EMTSPYNFWQYWRNID 265
              + ++      +P +   +  N  
Sbjct: 307 GNGLTIDAWLTYGTPESLALFMYNKP 332


>gi|148264550|ref|YP_001231256.1| pseudouridine synthase [Geobacter uraniireducens Rf4]
 gi|146398050|gb|ABQ26683.1| ribosomal large subunit pseudouridine synthase B [Geobacter
           uraniireducens Rf4]
          Length = 239

 Score = 37.9 bits (87), Expect = 3.5,   Method: Composition-based stats.
 Identities = 9/34 (26%), Positives = 18/34 (52%), Gaps = 1/34 (2%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIIS 385
           L  ++ +AG A S  EA R +    + +N  +++
Sbjct: 5   LQKILSQAGIA-SRREAERIITDGRVAVNGQVVT 37


>gi|90962052|ref|YP_535968.1| 30S ribosomal protein S4 [Lactobacillus salivarius UCC118]
 gi|301300890|ref|ZP_07207062.1| ribosomal protein S4 [Lactobacillus salivarius ACS-116-V-Col5a]
 gi|122448841|sp|Q1WT66|RS4_LACS1 RecName: Full=30S ribosomal protein S4
 gi|90821246|gb|ABD99885.1| SSU ribosomal protein S4P [Lactobacillus salivarius UCC118]
 gi|300214749|gb|ADJ79165.1| 30S ribosomal protein S4 [Lactobacillus salivarius CECT 5713]
 gi|300851489|gb|EFK79201.1| ribosomal protein S4 [Lactobacillus salivarius ACS-116-V-Col5a]
          Length = 201

 Score = 37.9 bits (87), Expect = 3.5,   Method: Composition-based stats.
 Identities = 6/48 (12%), Positives = 20/48 (41%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
            ++ + G A++  +AR+ +    I ++   +     +++     S   
Sbjct: 97  NVVYRLGLASTRRQARQLVNHGHITVDGKRVDIPSYEVEPGQVISLRE 144


>gi|34497146|ref|NP_901361.1| hypothetical protein CV_1691 [Chromobacterium violaceum ATCC 12472]
 gi|34103003|gb|AAQ59366.1| conserved hypothetical protein [Chromobacterium violaceum ATCC
           12472]
          Length = 71

 Score = 37.9 bits (87), Expect = 3.5,   Method: Composition-based stats.
 Identities = 5/34 (14%), Positives = 12/34 (35%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSI 383
           + L  L+       S   A+  +    + +N  +
Sbjct: 12  IALCDLLKACNVCHSGGAAKHFIAEGNVSVNGQV 45


>gi|317030176|ref|XP_001392029.2| S4 domain containing protein [Aspergillus niger CBS 513.88]
          Length = 465

 Score = 37.9 bits (87), Expect = 3.5,   Method: Composition-based stats.
 Identities = 9/36 (25%), Positives = 17/36 (47%)

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
           FA+ST +AR+ +   A+ +N   +      +   D 
Sbjct: 148 FASSTRQARQFVIHGAVTVNGKKMRYPGYLLNPGDL 183


>gi|40062484|gb|AAR37436.1| RNA pseudouridylate synthase, putative [uncultured marine bacterium
           105]
          Length = 255

 Score = 37.9 bits (87), Expect = 3.5,   Method: Composition-based stats.
 Identities = 14/71 (19%), Positives = 30/71 (42%), Gaps = 5/71 (7%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIIS--NEKLQIKLQDFDSTGNIKL 404
           S  + L  ++  AG  +S   A R ++   + +N   ++    K    L D    G  K+
Sbjct: 3   SPKVRLQKVLASAGI-SSRRAAERLIEVGRVTVNGRSVTKLGAKADPDLDDIRVDGR-KV 60

Query: 405 SFGK-KNHIIC 414
             G+ + +++ 
Sbjct: 61  KTGRPRIYLLV 71


>gi|18309615|ref|NP_561549.1| tryptophanyl-tRNA synthetase [Clostridium perfringens str. 13]
 gi|20178125|sp|Q8XMQ5|SYW_CLOPE RecName: Full=Tryptophanyl-tRNA synthetase; AltName:
           Full=Tryptophan--tRNA ligase; Short=TrpRS
 gi|18144292|dbj|BAB80339.1| tryptophan-tRNA ligase [Clostridium perfringens str. 13]
          Length = 332

 Score = 37.9 bits (87), Expect = 3.5,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 43/130 (33%), Gaps = 18/130 (13%)

Query: 150 VNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICG 209
           ++RM  ++    ++          FNY +L A D +     Y+  L   G DQ  ++   
Sbjct: 106 LSRMTQYKDKSKKMGDSIGAGL--FNYPVLMAADILL----YNADLVPVGKDQMQHLELA 159

Query: 210 IDLGERLKTPKLFALTSP-LLTTASG----------TKMGKTLSGAIWLNKEMTSPYNFW 258
            D+G R         T P       G           KM K+ +        M  P    
Sbjct: 160 RDIGTRFNNSYSKTFTIPEGYVPKEGAKIMDLQDPSKKMSKSDANPNGFILIMDEPNVIR 219

Query: 259 QYW-RNIDDA 267
           +   R + D+
Sbjct: 220 KKISRAVTDS 229


>gi|58581168|ref|YP_200184.1| hypothetical protein XOO1545 [Xanthomonas oryzae pv. oryzae
           KACC10331]
 gi|84623093|ref|YP_450465.1| hypothetical protein XOO_1436 [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|188575685|ref|YP_001912614.1| hypothetical protein PXO_04773 [Xanthomonas oryzae pv. oryzae
           PXO99A]
 gi|58425762|gb|AAW74799.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae
           KACC10331]
 gi|84367033|dbj|BAE68191.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|188520137|gb|ACD58082.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae
           PXO99A]
          Length = 80

 Score = 37.9 bits (87), Expect = 3.6,   Method: Composition-based stats.
 Identities = 11/67 (16%), Positives = 27/67 (40%)

Query: 340 SISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDST 399
           S+  D     + L  L+  AG A S  + +  + S A+ ++      +  +I+       
Sbjct: 3   SLEFDLDGDYIALNQLLKLAGIADSGGQGKAIVASGAVSVDGVQELRKTAKIRPGQLVQL 62

Query: 400 GNIKLSF 406
            ++++  
Sbjct: 63  DDVEIRV 69


>gi|16804237|ref|NP_465722.1| tryptophanyl-tRNA synthetase [Listeria monocytogenes EGD-e]
 gi|47095772|ref|ZP_00233378.1| tryptophanyl-tRNA synthetase [Listeria monocytogenes str. 1/2a
           F6854]
 gi|217963640|ref|YP_002349318.1| tryptophanyl-tRNA synthetase [Listeria monocytogenes HCC23]
 gi|224498944|ref|ZP_03667293.1| tryptophanyl-tRNA synthetase [Listeria monocytogenes Finland 1988]
 gi|224501002|ref|ZP_03669309.1| tryptophanyl-tRNA synthetase [Listeria monocytogenes FSL R2-561]
 gi|254826913|ref|ZP_05231600.1| tryptophanyl-tRNA synthetase [Listeria monocytogenes FSL N3-165]
 gi|254831365|ref|ZP_05236020.1| tryptophanyl-tRNA synthetase [Listeria monocytogenes 10403S]
 gi|254899100|ref|ZP_05259024.1| tryptophanyl-tRNA synthetase [Listeria monocytogenes J0161]
 gi|254912759|ref|ZP_05262771.1| tryptophanyl-tRNA synthetase [Listeria monocytogenes J2818]
 gi|254937086|ref|ZP_05268783.1| tryptophanyl-tRNA synthetase [Listeria monocytogenes F6900]
 gi|290893145|ref|ZP_06556133.1| tryptophanyl-tRNA synthetase [Listeria monocytogenes FSL J2-071]
 gi|20178126|sp|Q8Y577|SYW_LISMO RecName: Full=Tryptophanyl-tRNA synthetase; AltName:
           Full=Tryptophan--tRNA ligase; Short=TrpRS
 gi|16411668|emb|CAD00276.1| tryptophanyl-tRNA synthetase [Listeria monocytogenes EGD-e]
 gi|47015915|gb|EAL06842.1| tryptophanyl-tRNA synthetase [Listeria monocytogenes str. 1/2a
           F6854]
 gi|217332910|gb|ACK38704.1| tryptophanyl-tRNA synthetase [Listeria monocytogenes HCC23]
 gi|258599293|gb|EEW12618.1| tryptophanyl-tRNA synthetase [Listeria monocytogenes FSL N3-165]
 gi|258609688|gb|EEW22296.1| tryptophanyl-tRNA synthetase [Listeria monocytogenes F6900]
 gi|290557307|gb|EFD90833.1| tryptophanyl-tRNA synthetase [Listeria monocytogenes FSL J2-071]
 gi|293590753|gb|EFF99087.1| tryptophanyl-tRNA synthetase [Listeria monocytogenes J2818]
 gi|307571784|emb|CAR84963.1| trpS [Listeria monocytogenes L99]
 gi|313607431|gb|EFR83792.1| tryptophan--tRNA ligase [Listeria monocytogenes FSL F2-208]
          Length = 331

 Score = 37.9 bits (87), Expect = 3.6,   Method: Composition-based stats.
 Identities = 34/204 (16%), Positives = 61/204 (29%), Gaps = 45/204 (22%)

Query: 143 EIGSFFSVNRMLSFES----------VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYD 192
           E+ +      +L               + +   +  +S     Y  L A D +     Y 
Sbjct: 83  EVAAHAQAAWILQCNVYIGELERMTQFKDKSAGKAGVSAGLLTYPPLMAADILL----YQ 138

Query: 193 CRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-----------TKMGKT- 240
             L   G DQ  +I    DL ER         T P +                 KM K+ 
Sbjct: 139 TDLVPVGEDQKQHIELTRDLAERFNKKHADIFTMPEVFIPKQGARVMSLQDPTKKMSKSD 198

Query: 241 --LSGAIWLNKEMTSPYNFWQYWRN-IDDAD------------VVSFAKRLTTLPMSEID 285
             L  AI+L   +  P    +  ++ + D+             V +     + +    I 
Sbjct: 199 ANLKNAIFL---LDPPATIRKKIKSAVTDSSGIIEYNKEEKPGVSNLLTIYSVITGETIA 255

Query: 286 RMAKL-QGKEINEAKKIIATEITT 308
            + +   GK   + K  +A  + +
Sbjct: 256 SIEEKYVGKGYGDFKTDLAELVVS 279


>gi|188528042|ref|YP_001910729.1| tryptophanyl-tRNA synthetase [Helicobacter pylori Shi470]
 gi|188144282|gb|ACD48699.1| tryptophanyl-tRNA synthetase [Helicobacter pylori Shi470]
          Length = 326

 Score = 37.5 bits (86), Expect = 3.6,   Method: Composition-based stats.
 Identities = 42/238 (17%), Positives = 79/238 (33%), Gaps = 40/238 (16%)

Query: 147 FFSVNRMLSFESVR-SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGN 205
             S+  M      +   LK  +S++   FNY IL A D +     Y   L   G DQ  +
Sbjct: 98  QVSMGEMQRMTQFKDKSLKNPKSVNVGLFNYPILMASDILL----YQSDLVPVGEDQKQH 153

Query: 206 IICGIDLGERLKT--PKLFALTSPLLTTASG---------TKMGKTLSG---AIWLNKEM 251
           +    ++ E+        F +  PL+               KM K+  G   AI+L   +
Sbjct: 154 LELTRNIAEKFNRDFGSCFKVPEPLIAKVGARVMGLDDPKVKMSKSHQGANHAIFL---L 210

Query: 252 TSPYNFWQYWRNIDDADV---------------VSFAKRLTTLPMSEIDRMAKLQGKEIN 296
             P    +  +      V               ++    L+      I+   K +G    
Sbjct: 211 DEPDIIVRKIKKATTDSVGVIAFDEKREGVFNLLNIYMLLSNESPENIEERFKNKG--YG 268

Query: 297 EAKKIIATEITTMVHG-REEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLL 353
           + KK +A  +   +   +E  ++ +   ++        +  P    +  +    MGL+
Sbjct: 269 DFKKELAEVVIQALKPIQERYKEISDDEVKAVLNGGVKKARPLAQATYQKAKELMGLV 326


>gi|170781661|ref|YP_001709993.1| putative RNA pseudouridine synthase [Clavibacter michiganensis
           subsp. sepedonicus]
 gi|169156229|emb|CAQ01371.1| putative RNA pseudouridine synthase [Clavibacter michiganensis
           subsp. sepedonicus]
          Length = 291

 Score = 37.5 bits (86), Expect = 3.6,   Method: Composition-based stats.
 Identities = 9/51 (17%), Positives = 19/51 (37%), Gaps = 1/51 (1%)

Query: 344 DEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
           DE   G+ L  ++  AG   S       + +  + +N   ++    +I   
Sbjct: 19  DEPVAGVRLQKVMAAAG-VASRRVCEDMIAAGRVTVNGETVTEPGRRIDPD 68


>gi|328906823|gb|EGG26589.1| S4 domain protein [Propionibacterium sp. P08]
          Length = 73

 Score = 37.5 bits (86), Expect = 3.6,   Method: Composition-based stats.
 Identities = 9/46 (19%), Positives = 20/46 (43%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           + L   +  A  A +  +AR  + S  + +N+ + +    Q+   D
Sbjct: 7   IRLGQYLKFANLAETGGQARELIASGMVSVNDEVETRRGRQLHPGD 52


>gi|327188988|gb|EGE56177.1| RNA-pseudouridine synthase protein, ribosomal large subunit B
           [Rhizobium etli CNPAF512]
          Length = 267

 Score = 37.5 bits (86), Expect = 3.6,   Method: Composition-based stats.
 Identities = 9/54 (16%), Positives = 24/54 (44%), Gaps = 1/54 (1%)

Query: 340 SISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL 393
            ++ D   + + L   + K G+  S  +A R +  + + I+   +++    + L
Sbjct: 15  KLTADAAGKRVTLPRALSKLGYC-SRTQAERLIAESRVSIDGRTVNDPSAWVDL 67


>gi|299134037|ref|ZP_07027230.1| lysyl-tRNA synthetase [Afipia sp. 1NLS2]
 gi|298590784|gb|EFI50986.1| lysyl-tRNA synthetase [Afipia sp. 1NLS2]
          Length = 549

 Score = 37.5 bits (86), Expect = 3.6,   Method: Composition-based stats.
 Identities = 20/140 (14%), Positives = 44/140 (31%), Gaps = 7/140 (5%)

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            D+           +M G D   ++     +   L           L     G K+ K+ 
Sbjct: 249 PDWAMRWVALGVDYEMAGKDLIDSVKLSGQICRALGGTPPEGFNYELFLDDKGQKISKSK 308

Query: 242 SGAIWLNK--EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK-LQGKEINEA 298
              + +++     SP +   +      A      +    +    +D   + L G    +A
Sbjct: 309 GNGLTIDEWLRYASPESLSLFMYREPKA----AKRLYFDVIPRNVDEYQQFLDGFARQDA 364

Query: 299 KKIIATEITTMVHGREEAEK 318
           K+ +   +  +  GR +A +
Sbjct: 365 KQRLGNPVWHIHAGRPQASE 384


>gi|257461220|ref|ZP_05626318.1| S4 domain protein [Campylobacter gracilis RM3268]
 gi|257441594|gb|EEV16739.1| S4 domain protein [Campylobacter gracilis RM3268]
          Length = 256

 Score = 37.5 bits (86), Expect = 3.6,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 18/44 (40%), Gaps = 8/44 (18%)

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFG 407
           S  EA   +K   + IN  ++S+          + +G  K+  G
Sbjct: 17  SRREADELIKQGKVSINGRVVSDF--------IEVSGEEKIRIG 52


>gi|171920538|ref|ZP_02695314.2| tryptophanyl-tRNA synthetase [Ureaplasma urealyticum serovar 13
           str. ATCC 33698]
 gi|171903234|gb|EDT49523.1| tryptophanyl-tRNA synthetase [Ureaplasma urealyticum serovar 13
           str. ATCC 33698]
          Length = 333

 Score = 37.5 bits (86), Expect = 3.6,   Method: Composition-based stats.
 Identities = 37/283 (13%), Positives = 85/283 (30%), Gaps = 48/283 (16%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   T + L  G+    +  F   +  ++    +    S+   P+  D +      ++I 
Sbjct: 7   GIQPTNN-LTLGNYLGAIKNFIDLQNDYEVFLFVADLHSLT--PNIFDNTNFFATKRQI- 62

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLL---REIGSFFSVNRMLSFE 157
                I    ++ I          +      L       +L     IG    + +     
Sbjct: 63  -----IATYLAAGID----PKKTCLFYQSDILAIPLLSHILLCSTSIGELTRMTQFKDKS 113

Query: 158 SVRSRLKREQSLSFLEFN-YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL---- 212
           +  +++     +       Y  L A D +     ++  +   G DQ  ++     L    
Sbjct: 114 AKATKMANNTEMIPSGLLTYPALMAADILA----FNADVVPVGQDQKQHLELTRTLADRF 169

Query: 213 GERLKT----PKLFA--LTSPLLTTAS-GTKMGKTLSGA---IWLNKEMTSPYN------ 256
            +R       P+++   + + ++       KM K+       I+LN              
Sbjct: 170 NKRYGQTFKLPQVYIPKIGAKIMDLLDPSVKMSKSSKNPKGVIFLNDSREQIIKKIKGAL 229

Query: 257 -------FWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG 292
                   +   +    +++++    LT L  +EI+     Q 
Sbjct: 230 TDNLNQVKYDVEQQPSVSNLITIYACLTNLTFAEIETKYNQQN 272


>gi|312140890|ref|YP_004008226.1| 30S ribosomal protein s4 rpsd [Rhodococcus equi 103S]
 gi|325675472|ref|ZP_08155156.1| 30S ribosomal protein S4 [Rhodococcus equi ATCC 33707]
 gi|311890229|emb|CBH49547.1| 30S ribosomal protein S4 RpsD [Rhodococcus equi 103S]
 gi|325553443|gb|EGD23121.1| 30S ribosomal protein S4 [Rhodococcus equi ATCC 33707]
          Length = 201

 Score = 37.5 bits (86), Expect = 3.6,   Method: Composition-based stats.
 Identities = 8/48 (16%), Positives = 20/48 (41%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
            ++ +AG A +  +AR+ +    + +NN  +     ++   D      
Sbjct: 95  NVVYRAGLARTRRQARQLVTHGHLLVNNKKVDIPSYRVSQYDIIDVRE 142


>gi|282859371|ref|ZP_06268479.1| pseudouridine synthase, RluA family [Prevotella bivia JCVIHMP010]
 gi|282587856|gb|EFB93053.1| pseudouridine synthase, RluA family [Prevotella bivia JCVIHMP010]
          Length = 297

 Score = 37.5 bits (86), Expect = 3.6,   Method: Composition-based stats.
 Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 7/59 (11%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKN 410
           L  L+   G   S  +A   LK+  IK+N  I++    Q+K+ D  +     +S  KKN
Sbjct: 25  LAWLLANVGETKSKVKA--TLKNRGIKVNGKIVTQFDHQLKIGDKIA-----ISKSKKN 76


>gi|260887335|ref|ZP_05898598.1| hemolysin A [Selenomonas sputigena ATCC 35185]
 gi|330838912|ref|YP_004413492.1| hemolysin A [Selenomonas sputigena ATCC 35185]
 gi|260862971|gb|EEX77471.1| hemolysin A [Selenomonas sputigena ATCC 35185]
 gi|329746676|gb|AEC00033.1| hemolysin A [Selenomonas sputigena ATCC 35185]
          Length = 271

 Score = 37.5 bits (86), Expect = 3.6,   Method: Composition-based stats.
 Identities = 8/40 (20%), Positives = 17/40 (42%)

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
           L+V+ G A S   AR  +    + ++   +      +K +
Sbjct: 9   LLVERGLAASRERARTMIMEGRVLVDGKKVEKAGTGVKPE 48


>gi|227541137|ref|ZP_03971186.1| RNA-binding S4 domain protein [Corynebacterium glucuronolyticum
           ATCC 51866]
 gi|227183097|gb|EEI64069.1| RNA-binding S4 domain protein [Corynebacterium glucuronolyticum
           ATCC 51866]
          Length = 88

 Score = 37.5 bits (86), Expect = 3.6,   Method: Composition-based stats.
 Identities = 8/49 (16%), Positives = 19/49 (38%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
              + L   +  A  A +  EA+  +    I++N  + +     ++  D
Sbjct: 9   DDSIKLGQFLKLANLAETGGEAKNLIAEGQIRVNGEVDTRRGKVLREGD 57


>gi|169838142|ref|ZP_02871330.1| isoleucyl-tRNA synthetase [candidate division TM7 single-cell
           isolate TM7a]
          Length = 310

 Score = 37.5 bits (86), Expect = 3.6,   Method: Composition-based stats.
 Identities = 16/81 (19%), Positives = 28/81 (34%), Gaps = 14/81 (17%)

Query: 223 ALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMS 282
            +T+ ++    G KM K+L          T P      +     AD + F    + L   
Sbjct: 173 VITTGVVAGNDGRKMSKSLGNF-------TDPNELMDKFS----ADSLRFLLLSSPLLNG 221

Query: 283 EIDRMAKLQGKEINEAKKIIA 303
           E      L  K + +  + +A
Sbjct: 222 E---DFALHDKSVGDVARKLA 239


>gi|302876506|ref|YP_003845139.1| 30S ribosomal protein S4 [Clostridium cellulovorans 743B]
 gi|307687178|ref|ZP_07629624.1| 30S ribosomal protein S4 [Clostridium cellulovorans 743B]
 gi|302579363|gb|ADL53375.1| ribosomal protein S4 [Clostridium cellulovorans 743B]
          Length = 206

 Score = 37.5 bits (86), Expect = 3.7,   Method: Composition-based stats.
 Identities = 12/61 (19%), Positives = 22/61 (36%), Gaps = 8/61 (13%)

Query: 349 GMGLLTLI--------VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG 400
           G  L+ L+         + G+  S NEAR+ +      +N   +      +K  D  +  
Sbjct: 89  GENLVKLLEMRLDNVIYRLGYGNSRNEARQLVTHGHFLVNGKKVDIPSYVVKAGDVITVR 148

Query: 401 N 401
            
Sbjct: 149 E 149


>gi|229823967|ref|ZP_04450036.1| hypothetical protein GCWU000282_01271 [Catonella morbi ATCC 51271]
 gi|229786321|gb|EEP22435.1| hypothetical protein GCWU000282_01271 [Catonella morbi ATCC 51271]
          Length = 202

 Score = 37.5 bits (86), Expect = 3.7,   Method: Composition-based stats.
 Identities = 7/48 (14%), Positives = 18/48 (37%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
            L+ + GFAT+  +AR+ +    + ++   +      +          
Sbjct: 96  NLVYRLGFATTRRQARQLVNHGHVTVDGKRVDIPSYLVTPGQVIGLRE 143


>gi|169823881|ref|YP_001691492.1| 30S ribosomal protein S4 [Finegoldia magna ATCC 29328]
 gi|302379778|ref|ZP_07268262.1| ribosomal protein S4 [Finegoldia magna ACS-171-V-Col3]
 gi|303234754|ref|ZP_07321380.1| ribosomal protein S4 [Finegoldia magna BVS033A4]
 gi|226699066|sp|B0RZT8|RS4_FINM2 RecName: Full=30S ribosomal protein S4
 gi|167830686|dbj|BAG07602.1| 30S ribosomal protein S4 [Finegoldia magna ATCC 29328]
 gi|302312366|gb|EFK94363.1| ribosomal protein S4 [Finegoldia magna ACS-171-V-Col3]
 gi|302494095|gb|EFL53875.1| ribosomal protein S4 [Finegoldia magna BVS033A4]
          Length = 198

 Score = 37.5 bits (86), Expect = 3.7,   Method: Composition-based stats.
 Identities = 10/48 (20%), Positives = 21/48 (43%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
            L+++A FA+S  +AR+ +    I++N   +     Q+          
Sbjct: 94  NLVLRASFASSIRQARQMVSHGLIRVNGKKVDIPSFQVAEGSVIELKE 141


>gi|167749348|ref|ZP_02421475.1| hypothetical protein EUBSIR_00300 [Eubacterium siraeum DSM 15702]
 gi|167657688|gb|EDS01818.1| hypothetical protein EUBSIR_00300 [Eubacterium siraeum DSM 15702]
          Length = 347

 Score = 37.5 bits (86), Expect = 3.7,   Method: Composition-based stats.
 Identities = 32/237 (13%), Positives = 65/237 (27%), Gaps = 37/237 (15%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGH----KPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
            T   LH GH    +    +Q        +   ++    ++  +    ++ R  +    +
Sbjct: 11  PTGR-LHIGHYVGSLR-RRVQLQNTGDFDEIYIMIADAQALTDNFDNPEKVRSNIGEVAL 68

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
                 +             K+   + +    L  + +  +     S    N  +  E  
Sbjct: 69  DYMAAGL----------DPEKSTIFIQSMIPELTELTFYYMNLVTVSRLQRNPTVKAEIT 118

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT- 218
               +      FL   Y I Q  D           + +G  DQ   +    ++  +  + 
Sbjct: 119 MRNFEASIPAGFL--CYPISQTADITAFKA---TTVPVG-EDQLPMLEQAKEIVHKFNSI 172

Query: 219 ------PKLFAL-----TSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNI 264
                      L        L  T    KM K+L   I+L     SP +      ++
Sbjct: 173 YEPVLVEPEILLPENEACMRLPGTDGKAKMSKSLGNCIYL---ADSPADIKAKIMSM 226


>gi|154509029|ref|ZP_02044671.1| hypothetical protein ACTODO_01546 [Actinomyces odontolyticus ATCC
           17982]
 gi|153798663|gb|EDN81083.1| hypothetical protein ACTODO_01546 [Actinomyces odontolyticus ATCC
           17982]
          Length = 76

 Score = 37.5 bits (86), Expect = 3.7,   Method: Composition-based stats.
 Identities = 11/60 (18%), Positives = 23/60 (38%), Gaps = 5/60 (8%)

Query: 337 PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
           PTI +  +     + L   I  A  A    +AR  +++  + +N  + +     +   D 
Sbjct: 4   PTIPVRGE-----IKLGQFIKLASLAEDGAQARELIQAGDVTVNGEVETRRGHHLSAGDL 58


>gi|268570200|ref|XP_002640716.1| Hypothetical protein CBG19783 [Caenorhabditis briggsae]
          Length = 497

 Score = 37.5 bits (86), Expect = 3.7,   Method: Composition-based stats.
 Identities = 33/194 (17%), Positives = 64/194 (32%), Gaps = 17/194 (8%)

Query: 50  HAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKG- 108
           H G+L  +  +    + G K   L     + +   + +           ++  +   +  
Sbjct: 52  HVGYLVPMRKIADFLQAGLKVTILFADLHAYL--DNMKS------TWDVLKSRVVYYQKV 103

Query: 109 IFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFE-SVRSRLKREQ 167
           I +                   +     Y D + ++ +  S+   L     V  +++   
Sbjct: 104 IIALLESLDVPIGQLHFKKGTEYQLERDYTDHVLQLTAQVSLRDALKAGAEVVKQVESPL 163

Query: 168 SLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSP 227
               L     +LQA D   L        Q GG DQ    I   +   +LK  K + L +P
Sbjct: 164 LSGLLY---PLLQALDEQYLK----VDGQFGGVDQRKIFILAEEQLPKLKLGKRWHLMNP 216

Query: 228 LLTTASGTKMGKTL 241
           ++   +GTKM  + 
Sbjct: 217 MVPGLTGTKMSSSE 230


>gi|116625544|ref|YP_827700.1| ribosomal large subunit pseudouridine synthase B [Candidatus
           Solibacter usitatus Ellin6076]
 gi|116228706|gb|ABJ87415.1| ribosomal large subunit pseudouridine synthase B [Candidatus
           Solibacter usitatus Ellin6076]
          Length = 249

 Score = 37.5 bits (86), Expect = 3.7,   Method: Composition-based stats.
 Identities = 10/54 (18%), Positives = 24/54 (44%), Gaps = 3/54 (5%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISN--EKLQIKLQDFDSTGNIK 403
           L  ++ +AG  +S  +A + ++   + +N S+I+    K  +        G + 
Sbjct: 6   LQKILSQAG-VSSRRQAEKLMQEGRVTVNGSVITELGSKADLDRDHIKVDGRLL 58


>gi|110636569|ref|YP_676776.1| ribosomal large subunit pseudouridine synthase B [Cytophaga
           hutchinsonii ATCC 33406]
 gi|110279250|gb|ABG57436.1| pseudouridylate synthase (ribosomal large subunit pseudouridine
           synthase B) [Cytophaga hutchinsonii ATCC 33406]
          Length = 562

 Score = 37.5 bits (86), Expect = 3.7,   Method: Composition-based stats.
 Identities = 11/49 (22%), Positives = 21/49 (42%), Gaps = 1/49 (2%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           I  +G   S  EA + +    +K+N  +++    ++K  D     N  L
Sbjct: 335 ISNSGIC-SRREADQLIIEGTVKVNGIVVTELGYKVKPGDSVKYNNKVL 382


>gi|311068833|ref|YP_003973756.1| RluB protein [Bacillus atrophaeus 1942]
 gi|310869350|gb|ADP32825.1| RluB [Bacillus atrophaeus 1942]
          Length = 244

 Score = 37.5 bits (86), Expect = 3.7,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 24/55 (43%), Gaps = 1/55 (1%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
           L  +I  AG   S  +A   +K   +K+N  II+   +++   D      +K+  
Sbjct: 4   LQKVIAHAG-VASRRKAEELIKEGKVKVNGKIITELGVKVTGSDQIEVNGMKIER 57


>gi|308070661|ref|YP_003872266.1| tryptophanyl-tRNA synthetase (tryptophan--tRNA ligase)
           [Paenibacillus polymyxa E681]
 gi|305859940|gb|ADM71728.1| Tryptophanyl-tRNA synthetase (Tryptophan--tRNA ligase)
           [Paenibacillus polymyxa E681]
          Length = 329

 Score = 37.5 bits (86), Expect = 3.7,   Method: Composition-based stats.
 Identities = 45/338 (13%), Positives = 100/338 (29%), Gaps = 54/338 (15%)

Query: 37  TAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRS 96
           T   G   +   L  G+    M  F   +  H+   ++    + I  P    + R    S
Sbjct: 3   TVLSGIQPSGQ-LTLGNYIGAMKNFVKLQEDHQCYFMVVDLHA-ITVPQEPAQLREQ--S 58

Query: 97  QEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSF 156
           + +                +                  + ++  +  + +   + RM   
Sbjct: 59  EAVAALFIAAGINPEKSNVFLQSHVPQH--------AELGWL--MTTLTNMGELERMTQ- 107

Query: 157 ESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL 216
              + +   + S+    F Y  L A D +     Y+  L   G DQ  ++    DL  R 
Sbjct: 108 --FKDKAAGKDSVGAGLFVYPSLMAADILL----YNADLVPVGDDQKQHLELTRDLAGRF 161

Query: 217 KTPKLFALTSP----------LLTTAS-GTKMGKTLSGAIWLNKEMTSPYNFWQYW-RNI 264
                   T P          +++      KM K+   A      +  P    +   R  
Sbjct: 162 NHRYGDYFTVPEPYIPEVGARIMSLDDVSKKMSKSNPNAGSFIALLDEPKVIRKKISRAT 221

Query: 265 DD---------------ADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTM 309
            D               ++++    + + L + E+    + +G+     KK +A  +  M
Sbjct: 222 TDSGSEVRYDPANKPEISNLMGIYSQCSGLSLQEV--QDRYEGQMYGTFKKELAETVVAM 279

Query: 310 V----HGREEAEKAATAAMECFDMSIHSQHMPTISISK 343
           +        +  ++          ++ +Q    +++S 
Sbjct: 280 LEPIQQRYRDIRESGEIGRILAQSAVRAQEAAEVTLSA 317


>gi|269302593|gb|ACZ32693.1| tryptophanyl-tRNA synthetase [Chlamydophila pneumoniae LPCoLN]
          Length = 344

 Score = 37.5 bits (86), Expect = 3.7,   Method: Composition-based stats.
 Identities = 37/233 (15%), Positives = 75/233 (32%), Gaps = 33/233 (14%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTG---HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +    L+      +    ++    ++        + R+    +E+ 
Sbjct: 13  PTGK-LHLGHWVGSIK-NRLELQNSPEYDCFFIIADLHTL------TTKIRK----EEVL 60

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC-SIKYIDLLREIGSFFSVNRMLSFESV 159
           +    I  + + ++  G   T +++            ++     I     +      +  
Sbjct: 61  DVDNHIYEVLADWLSVGIDPTKSIIYLQSAIPEIYELHLLFSMLISINRVMGIPSLKDMA 120

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
           R+    E  LS+    Y ILQ+ D + LAK     +   G D   ++    D+       
Sbjct: 121 RNASIEEGGLSYGLIGYPILQSADIL-LAKAQFVPV---GKDNEAHVELTRDIARNFNR- 175

Query: 220 KLFALTSP----------LLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYW 261
            L+    P           L    G  KM K+ + AI+L+    +     +  
Sbjct: 176 -LYGQVFPEPEVLQGELTSLVGIDGQGKMSKSANNAIYLSDSDATITEKVRKM 227


>gi|302876106|ref|YP_003844739.1| leucyl-tRNA synthetase [Clostridium cellulovorans 743B]
 gi|307686831|ref|ZP_07629277.1| leucyl-tRNA synthetase [Clostridium cellulovorans 743B]
 gi|302578963|gb|ADL52975.1| leucyl-tRNA synthetase [Clostridium cellulovorans 743B]
          Length = 808

 Score = 37.5 bits (86), Expect = 3.7,   Method: Composition-based stats.
 Identities = 16/89 (17%), Positives = 33/89 (37%), Gaps = 14/89 (15%)

Query: 228 LLTTASGTKMGKTLSGAIWLN-------KEMTSPYNFWQY-------WRNIDDADVVSFA 273
           L+    G KM K+    I  +        ++   Y  + +       W +     +  F 
Sbjct: 562 LILGPDGLKMSKSKGNTISPDTYISEFGADVFRMYLMFGFDYTEGGPWSDDAIKSMARFV 621

Query: 274 KRLTTLPMSEIDRMAKLQGKEINEAKKII 302
            R+  +  S ++ M K     I++A+K +
Sbjct: 622 DRVERVITSAVEEMKKSGKTSIDKAEKDL 650


>gi|326803723|ref|YP_004321541.1| pseudouridine synthase B, ribosomal large subunit [Aerococcus
           urinae ACS-120-V-Col10a]
 gi|326650759|gb|AEA00942.1| pseudouridine synthase B, ribosomal large subunit [Aerococcus
           urinae ACS-120-V-Col10a]
          Length = 240

 Score = 37.5 bits (86), Expect = 3.7,   Method: Composition-based stats.
 Identities = 8/45 (17%), Positives = 22/45 (48%), Gaps = 1/45 (2%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
           L  +I  AG   S  +A + + +  +++N  +++    ++  +D 
Sbjct: 4   LQKVIAHAG-VASRRDAEKLILAGRVRVNGQVVTELGTKVTKKDL 47


>gi|325843404|ref|ZP_08167962.1| ribosomal protein S4 [Turicibacter sp. HGF1]
 gi|325489326|gb|EGC91700.1| ribosomal protein S4 [Turicibacter sp. HGF1]
          Length = 199

 Score = 37.5 bits (86), Expect = 3.7,   Method: Composition-based stats.
 Identities = 8/48 (16%), Positives = 18/48 (37%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
            L+ + G A +  +AR+ +    I ++   +      +K     S   
Sbjct: 95  NLVYRLGLAATRRQARQLVNHGHITVDGKRVDIPSYSVKPGQTISLRE 142


>gi|325479161|gb|EGC82258.1| ribosomal protein S4 [Anaerococcus prevotii ACS-065-V-Col13]
          Length = 197

 Score = 37.5 bits (86), Expect = 3.7,   Method: Composition-based stats.
 Identities = 9/44 (20%), Positives = 18/44 (40%)

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
           ++G A +  EAR+ +    + +N   +     QI+  D      
Sbjct: 95  RSGLARTRREARQIVTHGHLTVNGKQVDIPSYQIEEGDVIEVRE 138


>gi|171778596|ref|ZP_02919723.1| hypothetical protein STRINF_00575 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171282819|gb|EDT48243.1| hypothetical protein STRINF_00575 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 340

 Score = 37.5 bits (86), Expect = 3.7,   Method: Composition-based stats.
 Identities = 38/225 (16%), Positives = 69/225 (30%), Gaps = 32/225 (14%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKT--GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +    L +    +     +    ++               S+ I+E
Sbjct: 12  PTGK-LHLGHYVGSLKNRVLLQNEDKYDMFVFLADQQALTDHAK---------ESEIIRE 61

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
           ++  +  +    +     K+   + +  + L  +    +     S    N  +  E  + 
Sbjct: 62  SVGNV-ALDYLSVGLDPAKSTIFIQSQISELAELTMYYMNLVSLSRLERNPTVKTEIAQK 120

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP-K 220
                    FL   Y I QA D      NY   + +G +DQ   I    ++        K
Sbjct: 121 GFGSSIPTGFL--VYPISQAADITAFKANY---VPVG-NDQKPMIEQTREIVRSFNHTYK 174

Query: 221 LFALTSP-----------LLTTASGT-KMGKTLSGAIWLNKEMTS 253
              L  P            L    G  KM K+L   I+L+ +  +
Sbjct: 175 TDVLVEPEGIFPRNEAAGRLPGLDGNAKMSKSLGNGIYLSDDADT 219


>gi|168186545|ref|ZP_02621180.1| ribosomal protein S4 [Clostridium botulinum C str. Eklund]
 gi|169295481|gb|EDS77614.1| ribosomal protein S4 [Clostridium botulinum C str. Eklund]
          Length = 196

 Score = 37.5 bits (86), Expect = 3.7,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 22/42 (52%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
            L+ + GFA S  +AR+ +    I +N S +     ++K+ D
Sbjct: 91  NLVYRIGFANSIRQARQMVNHGHILVNGSKVDIPSYEVKVGD 132


>gi|146329810|ref|YP_001210128.1| 30S ribosomal protein S4 [Dichelobacter nodosus VCS1703A]
 gi|172047329|sp|A5EX95|RS4_DICNV RecName: Full=30S ribosomal protein S4
 gi|146233280|gb|ABQ14258.1| 30S ribosomal protein S4 [Dichelobacter nodosus VCS1703A]
          Length = 206

 Score = 37.5 bits (86), Expect = 3.7,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 22/42 (52%)

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
           G+ ++  EAR+ +   AI++N   ++    Q++ +D  S   
Sbjct: 106 GYGSTRAEARQLVSHGAIEVNGQRVTIASYQVQAEDIVSVRE 147


>gi|108563622|ref|YP_627938.1| tryptophanyl-tRNA synthetase [Helicobacter pylori HPAG1]
 gi|107837395|gb|ABF85264.1| tryptophanyl-tRNA synthetase [Helicobacter pylori HPAG1]
          Length = 339

 Score = 37.5 bits (86), Expect = 3.7,   Method: Composition-based stats.
 Identities = 37/188 (19%), Positives = 62/188 (32%), Gaps = 39/188 (20%)

Query: 147 FFSVNRMLSFESVR-SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGN 205
             S+  M      +   LK  +S++   FNY IL A D +     Y   L   G DQ  +
Sbjct: 111 QVSMGEMQRMTQFKDKSLKNPKSVNVGLFNYPILMASDILL----YQSDLVPVGEDQKQH 166

Query: 206 IICGIDLGERLKT--PKLFALTSPLLTTASG---------TKMGKTLSG---AIWLNKEM 251
           +    ++ ER        F +  PL+               KM K+  G   AI+L   +
Sbjct: 167 LELTRNIAERFNRDFGNCFKVPEPLIAKVGARVMGLDDPKVKMSKSHQGANHAIFL---L 223

Query: 252 TSPYNFWQYWRNIDDADV---------------VSFAKRLTTLPMSEIDRMAKLQGKEIN 296
             P    +  +      +               ++    L+      I+   K +G    
Sbjct: 224 DEPDIIVKKIKKAATDSMGVIAFDEKREGIFNLLNIYMLLSNESPENIEERFKNKG--YG 281

Query: 297 EAKKIIAT 304
           + KK +A 
Sbjct: 282 DFKKELAE 289


>gi|42519012|ref|NP_964942.1| ribosomal large subunit pseudouridine synthase B [Lactobacillus
           johnsonii NCC 533]
 gi|41583299|gb|AAS08908.1| ribosomal large subunit pseudouridine synthase B [Lactobacillus
           johnsonii NCC 533]
          Length = 239

 Score = 37.5 bits (86), Expect = 3.7,   Method: Composition-based stats.
 Identities = 8/44 (18%), Positives = 21/44 (47%), Gaps = 1/44 (2%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           L  +I +AG   S  +A + + +  + +N   ++    +++  D
Sbjct: 5   LQKVIAQAG-VASRRKAEKMISAGQVTVNGKKVTELGTKVEPSD 47


>gi|148642809|ref|YP_001273322.1| 30S ribosomal protein S4e [Methanobrevibacter smithii ATCC 35061]
 gi|222445040|ref|ZP_03607555.1| hypothetical protein METSMIALI_00657 [Methanobrevibacter smithii
           DSM 2375]
 gi|261350391|ref|ZP_05975808.1| 30S ribosomal protein S4e [Methanobrevibacter smithii DSM 2374]
 gi|189045354|sp|A5UL76|RS4E_METS3 RecName: Full=30S ribosomal protein S4e
 gi|148551826|gb|ABQ86954.1| ribosomal protein S4e [Methanobrevibacter smithii ATCC 35061]
 gi|222434605|gb|EEE41770.1| hypothetical protein METSMIALI_00657 [Methanobrevibacter smithii
           DSM 2375]
 gi|288861174|gb|EFC93472.1| 30S ribosomal protein S4e [Methanobrevibacter smithii DSM 2374]
          Length = 242

 Score = 37.5 bits (86), Expect = 3.8,   Method: Composition-based stats.
 Identities = 8/39 (20%), Positives = 18/39 (46%)

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
              A ++ EA+R + S  + ++  +I + K  +   D  
Sbjct: 53  LKLADNSREAKRIINSGNVLVDGRVIKDYKFPVGFMDII 91


>gi|317124881|ref|YP_004098993.1| cysteinyl-tRNA synthetase [Intrasporangium calvum DSM 43043]
 gi|315588969|gb|ADU48266.1| cysteinyl-tRNA synthetase [Intrasporangium calvum DSM 43043]
          Length = 418

 Score = 37.5 bits (86), Expect = 3.8,   Method: Composition-based stats.
 Identities = 11/61 (18%), Positives = 22/61 (36%), Gaps = 5/61 (8%)

Query: 193 CRLQMGGSDQWG--NIICGIDLGERLKTPKLFALTS--PLLTTASGTKMGKTLSGAIWLN 248
             +Q GG+D     + +              FA T     +    G KM K+    ++++
Sbjct: 249 IDVQGGGTDLVFPHHEMSAAHA-RAFSGRPAFARTYVHQGMVGLDGEKMSKSKGNLVFVS 307

Query: 249 K 249
           +
Sbjct: 308 E 308


>gi|315125461|ref|YP_004067464.1| 16S rRNA pseudouridylate 516 synthase [Pseudoalteromonas sp.
           SM9913]
 gi|315013974|gb|ADT67312.1| 16S rRNA pseudouridylate 516 synthase [Pseudoalteromonas sp.
           SM9913]
          Length = 232

 Score = 37.5 bits (86), Expect = 3.8,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 24/55 (43%), Gaps = 1/55 (1%)

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQ-DFDSTGNIKLSFGKKNHIICHLCG 418
            ++AR  +KS A  +N  +I+    Q+  Q D        +  GK+  ++    G
Sbjct: 19  RSKARAAIKSQAATVNGEVITAFDFQVSQQDDVLFYDEPLVFLGKRYFMLNKPVG 73


>gi|124267384|ref|YP_001021388.1| hypothetical protein Mpe_A2197 [Methylibium petroleiphilum PM1]
 gi|124260159|gb|ABM95153.1| conserved hypothetical protein [Methylibium petroleiphilum PM1]
          Length = 83

 Score = 37.5 bits (86), Expect = 3.8,   Method: Composition-based stats.
 Identities = 7/32 (21%), Positives = 17/32 (53%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINN 381
           + L  L+   G A S   A++ ++S  ++++ 
Sbjct: 18  ITLDALLKATGLADSGGAAKQLIQSGQVQVDG 49


>gi|284802645|ref|YP_003414510.1| tryptophanyl-tRNA synthetase [Listeria monocytogenes 08-5578]
 gi|284995787|ref|YP_003417555.1| tryptophanyl-tRNA synthetase [Listeria monocytogenes 08-5923]
 gi|284058207|gb|ADB69148.1| tryptophanyl-tRNA synthetase [Listeria monocytogenes 08-5578]
 gi|284061254|gb|ADB72193.1| tryptophanyl-tRNA synthetase [Listeria monocytogenes 08-5923]
          Length = 331

 Score = 37.5 bits (86), Expect = 3.8,   Method: Composition-based stats.
 Identities = 34/204 (16%), Positives = 61/204 (29%), Gaps = 45/204 (22%)

Query: 143 EIGSFFSVNRMLSFES----------VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYD 192
           E+ +      +L               + +   +  +S     Y  L A D +     Y 
Sbjct: 83  EVAAHAQAAWILQCNVYIGELERMTQFKDKSAGKAGVSAGLLTYPPLMAADILL----YQ 138

Query: 193 CRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-----------TKMGKT- 240
             L   G DQ  +I    DL ER         T P +                 KM K+ 
Sbjct: 139 TDLVPVGEDQKQHIELTRDLAERFNKKHADIFTMPEVFIPKQGARVMSLQDPTKKMSKSD 198

Query: 241 --LSGAIWLNKEMTSPYNFWQYWRN-IDDAD------------VVSFAKRLTTLPMSEID 285
             L  AI+L   +  P    +  ++ + D+             V +     + +    I 
Sbjct: 199 ANLKNAIFL---LDPPATIRKKIKSAVTDSSGIIEYNKEEKPGVSNLLTIYSVITGETIA 255

Query: 286 RMAKL-QGKEINEAKKIIATEITT 308
            + +   GK   + K  +A  + +
Sbjct: 256 TIEEKYVGKGYGDFKTDLAELVVS 279


>gi|305679764|ref|ZP_07402574.1| ribosomal protein S4 [Corynebacterium matruchotii ATCC 14266]
 gi|305660384|gb|EFM49881.1| ribosomal protein S4 [Corynebacterium matruchotii ATCC 14266]
          Length = 203

 Score = 37.5 bits (86), Expect = 3.8,   Method: Composition-based stats.
 Identities = 7/45 (15%), Positives = 19/45 (42%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
            ++ +AG A +  +AR+ +      +N   ++    ++   D   
Sbjct: 95  NVVYRAGLARTRRQARQLVSHGHFLVNGKKVNVPSYRVSQYDIID 139


>gi|225020483|ref|ZP_03709675.1| hypothetical protein CORMATOL_00490 [Corynebacterium matruchotii
           ATCC 33806]
 gi|224946872|gb|EEG28081.1| hypothetical protein CORMATOL_00490 [Corynebacterium matruchotii
           ATCC 33806]
          Length = 203

 Score = 37.5 bits (86), Expect = 3.8,   Method: Composition-based stats.
 Identities = 7/45 (15%), Positives = 19/45 (42%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
            ++ +AG A +  +AR+ +      +N   ++    ++   D   
Sbjct: 95  NVVYRAGLARTRRQARQLVSHGHFLVNGKKVNVPSYRVSQYDIID 139


>gi|156089455|ref|XP_001612134.1| hypothetical protein [Babesia bovis T2Bo]
 gi|154799388|gb|EDO08566.1| hypothetical protein BBOV_III010100 [Babesia bovis]
          Length = 329

 Score = 37.5 bits (86), Expect = 3.8,   Method: Composition-based stats.
 Identities = 8/57 (14%), Positives = 19/57 (33%), Gaps = 3/57 (5%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
           + +     + G   S   A+R +K   + +N + + ++         D      L  
Sbjct: 3   IRISQFCARVGIC-SRGAAKRLIKKGHVLLNGTAVKSD--IPVKSGLDPGCVSLLRA 56


>gi|288906440|ref|YP_003431662.1| tryptophanyl-tRNA synthetase [Streptococcus gallolyticus UCN34]
 gi|306832477|ref|ZP_07465629.1| tryptophan--tRNA ligase [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|325979502|ref|YP_004289218.1| tryptophanyl-tRNA synthetase II [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
 gi|288733166|emb|CBI14747.1| tryptophanyl-tRNA synthetase [Streptococcus gallolyticus UCN34]
 gi|304425377|gb|EFM28497.1| tryptophan--tRNA ligase [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|325179430|emb|CBZ49474.1| tryptophanyl-tRNA synthetase II [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
          Length = 340

 Score = 37.5 bits (86), Expect = 3.9,   Method: Composition-based stats.
 Identities = 39/223 (17%), Positives = 71/223 (31%), Gaps = 28/223 (12%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
            T   LH GH    +    L +  +K    +      + D     +  +   S+ I+E++
Sbjct: 12  PTGK-LHLGHYVGSLKNRVLLQNENKYDMFV-----FLADQQALTDHAK--ESEIIRESV 63

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL 163
             +  +    +     K+   + +    L  +    +     +    N  +  E  +   
Sbjct: 64  GNV-ALDYLSVGLDPAKSTIFIQSQIPELAELTMYYMNLVSLARLERNPTVKTEIAQKGF 122

Query: 164 KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP-KLF 222
                  FL   Y I QA D      NY   + +G +DQ   I    ++        K  
Sbjct: 123 GSSIPTGFL--VYPISQAADITAFKANY---VPVG-NDQKPMIEQTREIVRSFNHTYKTD 176

Query: 223 ALTSP-----------LLTTASGT-KMGKTLSGAIWLNKEMTS 253
            L  P            L    G  KM K+L   I+L+ +  +
Sbjct: 177 VLVEPEGIFPENEAAGRLPGLDGNAKMSKSLGNGIYLSDDADT 219


>gi|256545448|ref|ZP_05472810.1| tryptophan--tRNA ligase [Anaerococcus vaginalis ATCC 51170]
 gi|256398844|gb|EEU12459.1| tryptophan--tRNA ligase [Anaerococcus vaginalis ATCC 51170]
          Length = 362

 Score = 37.5 bits (86), Expect = 3.9,   Method: Composition-based stats.
 Identities = 36/236 (15%), Positives = 68/236 (28%), Gaps = 35/236 (14%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGH--KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +     +Q  G+  K   ++    ++  +     + R     + I 
Sbjct: 11  PTGK-LHLGHYVGSLKNRVKMQNEGNYDKMYVMIADAQALTDNFDNPKKIR-----ENIT 64

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           E +     +          K    + +    L  + +  L     S    N  +  E   
Sbjct: 65  EVMLDYLSVG-----LDPNKVTFFVQSYVKELTELTFYLLNLVTLSRLERNPTVKSEIKS 119

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT-- 218
              +      FL   Y + Q  D +     +D  +   G DQ   +    +L     +  
Sbjct: 120 KNFETSLPTGFL--IYPVSQTSDIIL----FDSNIVPVGEDQEPMLEQARELVRSFNSTY 173

Query: 219 ------PKLFA----LTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNI 264
                 PK       +   L       KM K+L   I+L+          +   ++
Sbjct: 174 KEIFREPKAVIPENKVCRRLPGIDGNAKMSKSLDNCIYLSDSK---EEVKKKVMSM 226


>gi|227487393|ref|ZP_03917709.1| RNA-binding S4 domain protein [Corynebacterium glucuronolyticum
           ATCC 51867]
 gi|227092617|gb|EEI27929.1| RNA-binding S4 domain protein [Corynebacterium glucuronolyticum
           ATCC 51867]
          Length = 87

 Score = 37.5 bits (86), Expect = 3.9,   Method: Composition-based stats.
 Identities = 8/49 (16%), Positives = 19/49 (38%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
              + L   +  A  A +  EA+  +    I++N  + +     ++  D
Sbjct: 9   DDSIKLGQFLKLANLAETGGEAKNLIAEGQIRVNGEVDTRRGKVLREGD 57


>gi|157165467|ref|YP_001467825.1| putative peptide ABC transporter, permease protein [Campylobacter
           concisus 13826]
 gi|112801794|gb|EAT99138.1| hypothetical RNA pseudouridine synthase jhp_1352 (RNA-uridine
           isomerase) (RNA pseudouridylate synthase) [Campylobacter
           concisus 13826]
          Length = 257

 Score = 37.5 bits (86), Expect = 3.9,   Method: Composition-based stats.
 Identities = 12/53 (22%), Positives = 21/53 (39%), Gaps = 5/53 (9%)

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQD--FDSTGNIKLSFGKKNHIIC 414
           S  EA   +K+  + I   ++S+    +   D    +   IKL   KK   + 
Sbjct: 17  SRREADELIKAGKVSIAGRVVSDLATSVDEDDKVRINGRLIKL---KKEFTVI 66


>gi|330837322|ref|YP_004411963.1| tryptophanyl-tRNA synthetase [Spirochaeta coccoides DSM 17374]
 gi|329749225|gb|AEC02581.1| tryptophanyl-tRNA synthetase [Spirochaeta coccoides DSM 17374]
          Length = 330

 Score = 37.5 bits (86), Expect = 3.9,   Method: Composition-based stats.
 Identities = 35/238 (14%), Positives = 69/238 (28%), Gaps = 37/238 (15%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGG---GTSIIGDPSFRDESRRMMRSQ 97
           G   +   LH G     +  F   +  +     +      T  I      D  R  +   
Sbjct: 7   GIKPSGQ-LHLGSYIGAIKQFVTYQEDYHMFVFIANLHCITLPITPAELTDNLRDCLA-- 63

Query: 98  EIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFS-VNRMLSF 156
                   +    S+       K  A              +  +    ++   +NRM  +
Sbjct: 64  --FYLACGLDPERSTIFLQTDVKEHAQ-------------LGFILSCQTYLGELNRMTQY 108

Query: 157 ESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL 216
           +       R   L+   + Y  L A D +    +Y   + +G  DQ  ++    D+ ER+
Sbjct: 109 KDKAQGKNRNDVLTAGFYTYPTLMAADILLYNADY---VPVG-DDQKQHVELTRDIAERV 164

Query: 217 KT--PKLFALTSPLLTTASG---------TKMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
                ++F++  P++T              KM K+             P    +   +
Sbjct: 165 NKRFGQIFSVPEPVITKVGARIMALDNPAKKMSKSEHNTKGTIFLKDEPAAIRKKVMS 222


>gi|313665287|ref|YP_004047158.1| isoleucine--tRNA ligase [Mycoplasma leachii PG50]
 gi|312949203|gb|ADR23799.1| isoleucine--tRNA ligase [Mycoplasma leachii PG50]
          Length = 908

 Score = 37.5 bits (86), Expect = 3.9,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 40/123 (32%), Gaps = 26/123 (21%)

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQS-LSFLEFNYMILQAYDFVELAK 189
           W   +   + L +     S+ +    +++        S ++  E  Y  LQA        
Sbjct: 500 WFS-LDADEFLPDEYKNKSLRK--ERDTLDVWFDSGSSSIALSE-KYPKLQAP------- 548

Query: 190 NYDCRLQMGGSDQ---WGNIICGIDLG----ERLKTPKLFALTSPLLTTASGTKMGKTLS 242
            YD  L+  G+DQ   W N               K      +T    T   G KM K+L 
Sbjct: 549 -YDIYLE--GNDQYRGWFNASMINSTIYANKSPYKQLVSHGMT----TDEKGNKMSKSLG 601

Query: 243 GAI 245
             +
Sbjct: 602 NGV 604


>gi|297626576|ref|YP_003688339.1| Cysteine--tRNA ligase [Propionibacterium freudenreichii subsp.
           shermanii CIRM-BIA1]
 gi|296922341|emb|CBL56913.1| Cysteine--tRNA ligase [Propionibacterium freudenreichii subsp.
           shermanii CIRM-BIA1]
          Length = 418

 Score = 37.5 bits (86), Expect = 3.9,   Method: Composition-based stats.
 Identities = 13/57 (22%), Positives = 22/57 (38%), Gaps = 2/57 (3%)

Query: 195 LQMGGSDQWG--NIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNK 249
           +Q GG D     + +C  +       P   A     +    G KM K+L   + ++K
Sbjct: 252 VQGGGRDLAFPHHEMCAAEAIVATGKPFAEAYIHVGMVGLDGEKMSKSLGNLVLVSK 308


>gi|260592739|ref|ZP_05858197.1| ribosomal protein S4 [Prevotella veroralis F0319]
 gi|288803959|ref|ZP_06409382.1| ribosomal protein S4 [Prevotella melaninogenica D18]
 gi|302345100|ref|YP_003813453.1| ribosomal protein S4 [Prevotella melaninogenica ATCC 25845]
 gi|260535270|gb|EEX17887.1| ribosomal protein S4 [Prevotella veroralis F0319]
 gi|288333592|gb|EFC72044.1| ribosomal protein S4 [Prevotella melaninogenica D18]
 gi|302149280|gb|ADK95542.1| ribosomal protein S4 [Prevotella melaninogenica ATCC 25845]
          Length = 202

 Score = 37.5 bits (86), Expect = 3.9,   Method: Composition-based stats.
 Identities = 12/82 (14%), Positives = 31/82 (37%), Gaps = 3/82 (3%)

Query: 320 ATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKI 379
                  FD +  ++ + T  +    +   +    ++ + G A +   AR+ +    I +
Sbjct: 65  ERQFRNLFDKAAKAEGI-TGEVLLQSLESRLD--NVVFRLGIAPTRAAARQLVSHKHIVV 121

Query: 380 NNSIISNEKLQIKLQDFDSTGN 401
           N ++++    Q+K  D      
Sbjct: 122 NGNVVNIASYQVKAGDVVGVRE 143


>gi|257784936|ref|YP_003180153.1| 30S ribosomal protein S4 [Atopobium parvulum DSM 20469]
 gi|257473443|gb|ACV51562.1| ribosomal protein S4 [Atopobium parvulum DSM 20469]
          Length = 197

 Score = 37.5 bits (86), Expect = 3.9,   Method: Composition-based stats.
 Identities = 11/45 (24%), Positives = 22/45 (48%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
            +I + GFA +  EAR+ ++   I +N   +     ++K  D  +
Sbjct: 91  NVIFRLGFARTRKEARQTVRHGHITVNGQRVDIPSYRVKSGDVIA 135


>gi|224418175|ref|ZP_03656181.1| putative ribosomal pseudouridine synthase [Helicobacter canadensis
           MIT 98-5491]
 gi|253827502|ref|ZP_04870387.1| pseudouridine synthase, Rsu [Helicobacter canadensis MIT 98-5491]
 gi|313141710|ref|ZP_07803903.1| RNA pseudouridine synthase [Helicobacter canadensis MIT 98-5491]
 gi|253510908|gb|EES89567.1| pseudouridine synthase, Rsu [Helicobacter canadensis MIT 98-5491]
 gi|313130741|gb|EFR48358.1| RNA pseudouridine synthase [Helicobacter canadensis MIT 98-5491]
          Length = 250

 Score = 37.5 bits (86), Expect = 3.9,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 20/55 (36%), Gaps = 17/55 (30%)

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLCG 418
           S  EA + +K   + IN  II +   Q+                 KNH   ++ G
Sbjct: 14  SRREADQLIKEGKVSINKEIIKDFSYQV-----------------KNHTKVYVNG 51


>gi|307565139|ref|ZP_07627647.1| 30S ribosomal protein S4 [Prevotella amnii CRIS 21A-A]
 gi|307346170|gb|EFN91499.1| 30S ribosomal protein S4 [Prevotella amnii CRIS 21A-A]
          Length = 201

 Score = 37.5 bits (86), Expect = 3.9,   Method: Composition-based stats.
 Identities = 11/82 (13%), Positives = 30/82 (36%), Gaps = 3/82 (3%)

Query: 320 ATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKI 379
                  F+ +  S+ + T  +    +   +    ++ + G A +   AR+ +    I +
Sbjct: 65  ERQFRNLFEKAAKSEGI-TGEVLLQSLESRLD--NVVFRLGIAPTRAAARQLVGHKHITV 121

Query: 380 NNSIISNEKLQIKLQDFDSTGN 401
           N ++++     +K  D      
Sbjct: 122 NGNVVNIASYCVKTGDVVGVRE 143


>gi|294678331|ref|YP_003578946.1| ribosomal large subunit pseudouridine synthase D [Rhodobacter
           capsulatus SB 1003]
 gi|294477151|gb|ADE86539.1| ribosomal large subunit pseudouridine synthase D [Rhodobacter
           capsulatus SB 1003]
          Length = 347

 Score = 37.5 bits (86), Expect = 3.9,   Method: Composition-based stats.
 Identities = 14/66 (21%), Positives = 28/66 (42%)

Query: 330 SIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKL 389
           S  + H+  I I +D   R    L  +V    A S +   R +   A+  +   I+++K 
Sbjct: 2   SDIAAHLLRIEIGEDPAERLDKALAALVPEEAALSRSRLARLIAEGAVTRDGVAITDQKA 61

Query: 390 QIKLQD 395
           ++   +
Sbjct: 62  KVAPGE 67


>gi|227500646|ref|ZP_03930695.1| isoleucine--tRNA ligase [Anaerococcus tetradius ATCC 35098]
 gi|227217233|gb|EEI82577.1| isoleucine--tRNA ligase [Anaerococcus tetradius ATCC 35098]
          Length = 1037

 Score = 37.5 bits (86), Expect = 3.9,   Method: Composition-based stats.
 Identities = 21/111 (18%), Positives = 37/111 (33%), Gaps = 17/111 (15%)

Query: 169 LSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQ---WGNIICGIDLGERLKTPKLFALT 225
           + F + +Y   ++    +L   +       G DQ   W   +  I      K P    L 
Sbjct: 528 MPFAQIHYPFDKS---QKLDNYFPADFISEGIDQTRGWFYSLMAISTITLGKAPYKNVLV 584

Query: 226 SPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRL 276
           + L+   +G KM K+    +        P+  +  +     AD V F    
Sbjct: 585 NDLVVDKNGQKMSKSRGNTL-------DPFALFDKY----GADAVRFYSLY 624


>gi|222056680|ref|YP_002539042.1| ribosomal protein S4 [Geobacter sp. FRC-32]
 gi|254764590|sp|B9M6F3|RS4_GEOSF RecName: Full=30S ribosomal protein S4
 gi|221565969|gb|ACM21941.1| ribosomal protein S4 [Geobacter sp. FRC-32]
          Length = 208

 Score = 37.5 bits (86), Expect = 3.9,   Method: Composition-based stats.
 Identities = 11/38 (28%), Positives = 21/38 (55%)

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           + GFA+S  EAR+ ++     +N   ++   +Q+K  D
Sbjct: 106 RLGFASSRIEARQLVRHGHFTLNGKKVTIPSIQVKTGD 143


>gi|255065751|ref|ZP_05317606.1| S4 RNA-binding domain protein [Neisseria sicca ATCC 29256]
 gi|255050069|gb|EET45533.1| S4 RNA-binding domain protein [Neisseria sicca ATCC 29256]
          Length = 91

 Score = 37.5 bits (86), Expect = 4.0,   Method: Composition-based stats.
 Identities = 10/53 (18%), Positives = 22/53 (41%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
           E +  + L  L+  AG A S  +A+  +    +  N    + +  +I+  +  
Sbjct: 22  EDNEYIALCDLLKLAGLAESGGQAKAFIAEGLVLRNGETETRKTAKIRGGEVI 74


>gi|261378283|ref|ZP_05982856.1| S4 RNA-binding domain protein [Neisseria cinerea ATCC 14685]
 gi|269145374|gb|EEZ71792.1| S4 RNA-binding domain protein [Neisseria cinerea ATCC 14685]
          Length = 77

 Score = 37.5 bits (86), Expect = 4.0,   Method: Composition-based stats.
 Identities = 10/53 (18%), Positives = 22/53 (41%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
           E +  + L  L+  AG A S  +A+  +    +  N    + +  +I+  +  
Sbjct: 8   EDNEYIALCDLLKLAGLAESGGQAKAFIAEGLVLRNGETETRKTAKIRGGEVI 60


>gi|103486547|ref|YP_616108.1| pseudouridine synthase, Rsu [Sphingopyxis alaskensis RB2256]
 gi|98976624|gb|ABF52775.1| Pseudouridine synthase, Rsu [Sphingopyxis alaskensis RB2256]
          Length = 285

 Score = 37.5 bits (86), Expect = 4.0,   Method: Composition-based stats.
 Identities = 7/41 (17%), Positives = 17/41 (41%), Gaps = 1/41 (2%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNE 387
                +  L+ +AG   S  +  R ++   I +N  +++  
Sbjct: 46  DGPQRIAKLLARAG-VGSRRDVERMIEEGRIALNGEVVTQP 85


>gi|22299000|ref|NP_682247.1| hemolysin-like protein [Thermosynechococcus elongatus BP-1]
 gi|22295182|dbj|BAC09009.1| hemolysin-like protein [Thermosynechococcus elongatus BP-1]
          Length = 262

 Score = 37.5 bits (86), Expect = 4.0,   Method: Composition-based stats.
 Identities = 10/55 (18%), Positives = 23/55 (41%), Gaps = 2/55 (3%)

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD--STGNIKLSFG 407
           L+V+     S  +A+R +++ A+ +N+  I      + +            +S G
Sbjct: 11  LLVERHLCESRQQAQRWIRAGAVHVNHIPIDKPGTLVAVDATIQVKAKPAYVSRG 65


>gi|238852693|ref|ZP_04643103.1| ribosomal large subunit pseudouridine synthase B [Lactobacillus
           gasseri 202-4]
 gi|282852074|ref|ZP_06261432.1| pseudouridylate synthase [Lactobacillus gasseri 224-1]
 gi|311110814|ref|ZP_07712211.1| ribosomal large subunit pseudouridine synthase B [Lactobacillus
           gasseri MV-22]
 gi|238834839|gb|EEQ27066.1| ribosomal large subunit pseudouridine synthase B [Lactobacillus
           gasseri 202-4]
 gi|282556834|gb|EFB62438.1| pseudouridylate synthase [Lactobacillus gasseri 224-1]
 gi|311065968|gb|EFQ46308.1| ribosomal large subunit pseudouridine synthase B [Lactobacillus
           gasseri MV-22]
          Length = 239

 Score = 37.5 bits (86), Expect = 4.0,   Method: Composition-based stats.
 Identities = 9/44 (20%), Positives = 21/44 (47%), Gaps = 1/44 (2%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           L  +I +AG   S  +A + + +  + +N   I+    +++  D
Sbjct: 5   LQKVIAQAG-VASRRKAEKMISAGQVTVNGKKITELGTKVEPSD 47


>gi|317129994|ref|YP_004096276.1| pseudouridine synthase [Bacillus cellulosilyticus DSM 2522]
 gi|315474942|gb|ADU31545.1| pseudouridine synthase [Bacillus cellulosilyticus DSM 2522]
          Length = 237

 Score = 37.5 bits (86), Expect = 4.1,   Method: Composition-based stats.
 Identities = 13/46 (28%), Positives = 22/46 (47%), Gaps = 1/46 (2%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           M +  L+   GF  S  E +  LK   + +N+ +I + K QI   +
Sbjct: 1   MRIDKLLSNTGF-GSRKEVKGLLKKGGVTVNSELIKDGKRQIDPSE 45


>gi|296126890|ref|YP_003634142.1| ribosomal protein S4 [Brachyspira murdochii DSM 12563]
 gi|296018706|gb|ADG71943.1| ribosomal protein S4 [Brachyspira murdochii DSM 12563]
          Length = 208

 Score = 37.5 bits (86), Expect = 4.1,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 23/45 (51%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
            ++ + GFA S N+AR+ +    I +N   +S     IK+ D  S
Sbjct: 102 NVVYRLGFAKSRNQARQFVAHGFISVNGKKMSIPSYSIKVGDKIS 146


>gi|197105098|ref|YP_002130475.1| RNA pseudouridylate synthase [Phenylobacterium zucineum HLK1]
 gi|196478518|gb|ACG78046.1| RNA pseudouridylate synthase [Phenylobacterium zucineum HLK1]
          Length = 272

 Score = 37.5 bits (86), Expect = 4.1,   Method: Composition-based stats.
 Identities = 7/47 (14%), Positives = 19/47 (40%), Gaps = 1/47 (2%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
           + +    +   + ++G   S  EA   +    + I+   I++   +I
Sbjct: 13  DEAEPQRVNKWLAQSGVC-SRREAEALIADGLVSIDGETIADAGRKI 58


>gi|323705769|ref|ZP_08117342.1| leucyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum LX-11]
 gi|323534987|gb|EGB24765.1| leucyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum LX-11]
          Length = 814

 Score = 37.5 bits (86), Expect = 4.1,   Method: Composition-based stats.
 Identities = 15/89 (16%), Positives = 33/89 (37%), Gaps = 14/89 (15%)

Query: 228 LLTTASGTKMGKTLSGAIWLNK-------EMTSPYNFWQY-------WRNIDDADVVSFA 273
           ++    G KM K+    I  ++       ++   Y  + +       W +     +  F 
Sbjct: 567 IILGPDGNKMSKSRGNTISPDEYINEYGSDVFRMYLMFGFAFTEGGPWNDDGIKAMSRFI 626

Query: 274 KRLTTLPMSEIDRMAKLQGKEINEAKKII 302
           +R+  L    I+   K    EI++ +K +
Sbjct: 627 QRIERLVDKFIEEKGKAGKDEISKDEKEL 655


>gi|251778903|ref|ZP_04821823.1| leucine--tRNA ligase [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
 gi|243083218|gb|EES49108.1| leucine--tRNA ligase [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
          Length = 816

 Score = 37.5 bits (86), Expect = 4.1,   Method: Composition-based stats.
 Identities = 11/59 (18%), Positives = 20/59 (33%), Gaps = 8/59 (13%)

Query: 210 IDLGERLKTPKLFALTSP-LLTTASGTKMGKTLSGAIWLNK-------EMTSPYNFWQY 260
            D+G         +LT   L+    G KM K+    I  +        ++   Y  + +
Sbjct: 549 RDMGYLKFDEPFLSLTHQGLILGPDGLKMSKSKGNTISPDDYIKEFGADVFRMYLMFGF 607


>gi|152989816|ref|YP_001355538.1| RNA pseudouridine synthase [Nitratiruptor sp. SB155-2]
 gi|151421677|dbj|BAF69181.1| RNA pseudouridine synthase [Nitratiruptor sp. SB155-2]
          Length = 260

 Score = 37.5 bits (86), Expect = 4.1,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 18/42 (42%), Gaps = 2/42 (4%)

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQD--FDSTGNIK 403
           S  EA R ++   +K+N  I+      ++  D  F     IK
Sbjct: 14  SRREADRLIQEGFVKVNRQIVKEPFYDVQEGDKVFVKGKLIK 55


>gi|322499159|emb|CBZ34230.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 412

 Score = 37.5 bits (86), Expect = 4.1,   Method: Composition-based stats.
 Identities = 23/131 (17%), Positives = 43/131 (32%), Gaps = 17/131 (12%)

Query: 15  RGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLM 74
           R     + +     I   +  V  Y G   +  ++H GH+   ML  +LQ   + P+ + 
Sbjct: 79  RDLHKALVDIEA-SIKTGECSVFLYTGRGPSTGTMHLGHVLPFMLTKYLQDVFNLPLVI- 136

Query: 75  GGGTSIIGDPSFRDESRRMMRSQEIQENI---EKIKGIFSSFIKYGTGKTDALMLNNETW 131
                 I D        + +      E     E I+      I +        +  N  +
Sbjct: 137 -----QITD------DEKFLFRDVPFEGAKADELIRSNIKDIIAFDFNPRHTFIFRNTHY 185

Query: 132 LCSIKYIDLLR 142
           +  + Y  +LR
Sbjct: 186 MGDM-YPTVLR 195


>gi|308062537|gb|ADO04425.1| tryptophanyl-tRNA synthetase [Helicobacter pylori Cuz20]
          Length = 326

 Score = 37.5 bits (86), Expect = 4.1,   Method: Composition-based stats.
 Identities = 42/238 (17%), Positives = 79/238 (33%), Gaps = 40/238 (16%)

Query: 147 FFSVNRMLSFESVR-SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGN 205
             S+  M      +   LK  +S++   FNY IL A D +     Y   L   G DQ  +
Sbjct: 98  QVSMGEMQRMTQFKDKSLKNPKSVNVGLFNYPILMASDILL----YQSDLVPVGEDQKQH 153

Query: 206 IICGIDLGERLKT--PKLFALTSPLLTTASG---------TKMGKTLSG---AIWLNKEM 251
           +    ++ E+        F +  PL+               KM K+  G   AI+L   +
Sbjct: 154 LELTRNIAEKFNRDFGSCFKVPEPLIAKVGARVMGLDDPKVKMSKSHQGANHAIFL---L 210

Query: 252 TSPYNFWQYWRNIDDADV---------------VSFAKRLTTLPMSEIDRMAKLQGKEIN 296
             P    +  +      V               ++    L+      I+   K +G    
Sbjct: 211 DEPDIIVRKIKKAATDSVGVIAFDEKREGVFNLLNIYMLLSNESPENIEERFKNKG--YG 268

Query: 297 EAKKIIATEITTMVHG-REEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLL 353
           + KK +A  +   +   +E  ++ +   ++        +  P    +  +    MGL+
Sbjct: 269 DFKKELAEVVIQALKPIQERYKEISDDEVKAVLNGGAKKAKPLAQATYQKAKELMGLV 326


>gi|260431441|ref|ZP_05785412.1| lysyl-tRNA synthetase [Silicibacter lacuscaerulensis ITI-1157]
 gi|260415269|gb|EEX08528.1| lysyl-tRNA synthetase [Silicibacter lacuscaerulensis ITI-1157]
          Length = 524

 Score = 37.5 bits (86), Expect = 4.1,   Method: Composition-based stats.
 Identities = 20/142 (14%), Positives = 39/142 (27%), Gaps = 14/142 (9%)

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            D+           +M G D   ++     +   L      +L+  L     G K+ K+ 
Sbjct: 236 PDWALRWAALGVDYEMSGKDLIDSVTQSSKICRALGKLPPESLSYELFNDEHGQKISKSK 295

Query: 242 SGAI----WLN--KEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEI 295
              +    WL      +  Y  +Q           +  +    +    +D   +      
Sbjct: 296 GNGLSMEEWLTYAAPESLSYFMYQK--------PKTAKRLYFDVIPKAVDEYHQQLRAYP 347

Query: 296 NEAKKIIATEITTMVHGREEAE 317
            +  K         +HG E  E
Sbjct: 348 GQELKAQLNNPVWHIHGGEVPE 369


>gi|240273798|gb|EER37317.1| NAM9+ protein [Ajellomyces capsulatus H143]
 gi|325094771|gb|EGC48081.1| NAM9+ protein [Ajellomyces capsulatus H88]
          Length = 490

 Score = 37.5 bits (86), Expect = 4.1,   Method: Composition-based stats.
 Identities = 12/60 (20%), Positives = 28/60 (46%), Gaps = 2/60 (3%)

Query: 337 PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
           P + ++   + R + +   I +A FA+ST +AR+ +   ++ +N   +      +   D 
Sbjct: 114 PHMQMTFAPLERRLDVA--IFRAMFASSTRQARQFVIHGSVTVNGKKMRYPGYLLNPGDL 171


>gi|238021615|ref|ZP_04602041.1| hypothetical protein GCWU000324_01515 [Kingella oralis ATCC 51147]
 gi|237866229|gb|EEP67271.1| hypothetical protein GCWU000324_01515 [Kingella oralis ATCC 51147]
          Length = 102

 Score = 37.5 bits (86), Expect = 4.1,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 22/42 (52%)

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
           GFA++  EAR+ +   AI +N  +++    Q+K  D  +   
Sbjct: 2   GFASTRAEARQLVSHKAIMVNGQVVNIPSFQVKAGDVVAIRE 43


>gi|225555459|gb|EEH03751.1| NAM9+ protein [Ajellomyces capsulatus G186AR]
          Length = 490

 Score = 37.5 bits (86), Expect = 4.1,   Method: Composition-based stats.
 Identities = 12/60 (20%), Positives = 28/60 (46%), Gaps = 2/60 (3%)

Query: 337 PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
           P + ++   + R + +   I +A FA+ST +AR+ +   ++ +N   +      +   D 
Sbjct: 114 PHMQMTFAPLERRLDVA--IFRAMFASSTRQARQFVIHGSVTVNGKKMRYPGYLLNPGDL 171


>gi|187933434|ref|YP_001887335.1| leucyl-tRNA synthetase [Clostridium botulinum B str. Eklund 17B]
 gi|187721587|gb|ACD22808.1| leucine--tRNA ligase [Clostridium botulinum B str. Eklund 17B]
          Length = 816

 Score = 37.5 bits (86), Expect = 4.1,   Method: Composition-based stats.
 Identities = 11/59 (18%), Positives = 20/59 (33%), Gaps = 8/59 (13%)

Query: 210 IDLGERLKTPKLFALTSP-LLTTASGTKMGKTLSGAIWLNK-------EMTSPYNFWQY 260
            D+G         +LT   L+    G KM K+    I  +        ++   Y  + +
Sbjct: 549 RDMGYLKFDEPFLSLTHQGLILGPDGLKMSKSKGNTISPDDYIKEFGADVFRMYLMFGF 607


>gi|163842717|ref|YP_001627121.1| hemolysin A [Brucella suis ATCC 23445]
 gi|163673440|gb|ABY37551.1| hemolysin A [Brucella suis ATCC 23445]
          Length = 238

 Score = 37.5 bits (86), Expect = 4.1,   Method: Composition-based stats.
 Identities = 7/43 (16%), Positives = 19/43 (44%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
           +V+ GF  + + AR  ++   +K++   I+     +      +
Sbjct: 1   MVERGFFATRSRARDAIQRGTVKVDGRPITKPGQMVVRDAALA 43


>gi|163792563|ref|ZP_02186540.1| Lysyl-tRNA synthetase [alpha proteobacterium BAL199]
 gi|159182268|gb|EDP66777.1| Lysyl-tRNA synthetase [alpha proteobacterium BAL199]
          Length = 531

 Score = 37.5 bits (86), Expect = 4.1,   Method: Composition-based stats.
 Identities = 21/131 (16%), Positives = 42/131 (32%), Gaps = 19/131 (14%)

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKT 240
           A  +  L  +Y    +M G D   ++     +   L           L    +G K+ K+
Sbjct: 242 AMRWYALDVDY----EMSGKDLIDSVKLSSRITSILGGRPPEGFNYELFLDEAGQKVSKS 297

Query: 241 LSGAIWLNK--EMTSPYN----FWQ--------YWRNIDDADVVSFAKRLTTLPMSEIDR 286
               + +++      P +     +Q        Y+  I  A V  +   L+ +   E   
Sbjct: 298 KGNGLSVDEWLAYGPPESLSLFMYQQPRRAKRLYFDQIPRA-VDDYLTFLSKVHAEEPAD 356

Query: 287 MAKLQGKEINE 297
             +     I+E
Sbjct: 357 RLENPAWHIHE 367


>gi|153872819|ref|ZP_02001601.1| Tryptophanyl-tRNA synthetase [Beggiatoa sp. PS]
 gi|152070716|gb|EDN68400.1| Tryptophanyl-tRNA synthetase [Beggiatoa sp. PS]
          Length = 403

 Score = 37.5 bits (86), Expect = 4.1,   Method: Composition-based stats.
 Identities = 48/295 (16%), Positives = 80/295 (27%), Gaps = 82/295 (27%)

Query: 41  GYDLTASSLHAGHLTQLML----LFW-----LQKTGHKPISLMGGGTSIIGDPSF----- 86
           G   T   LH GHL  ++     L               ++     TS+I    +     
Sbjct: 12  GMRPTGR-LHLGHLHGVLKNWINLQHEYRCYFFVADWHALTTEYDNTSVIAQNVWDMVID 70

Query: 87  ---------------------RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL- 124
                                  E + ++        +E+I        K          
Sbjct: 71  WLAVGINPGEATLFIQSKVPEHAELQLLLSMSTPLSWLERIPTYKDQQQKLKDKDLSTYG 130

Query: 125 -----MLNNETWL-----------CSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQS 168
                +L +   L             + +I+  RE+   F+       +      + +  
Sbjct: 131 FLGYPLLQSADILVYKAGLVPVGEDQVAHIEFTRELARRFNHLYGREAD-----FEDKAK 185

Query: 169 LSFLEFNYMILQAYDFVELAKNY-----DCRLQMGGS--DQWGNIICGIDLGERLKTPKL 221
            +  +      + Y   EL K Y     +  LQ      D   NI  G D    L   + 
Sbjct: 186 EAIRKMGKKNAKLYK--ELRKRYQEQGDNEALQTAQVLVDTQQNISLG-DKKRLLGYLEG 242

Query: 222 FALTS-----PLLTTA------SGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNID 265
              T      PLLT         G KM K+ + AI L +    P +  +  R + 
Sbjct: 243 QTKTILPEPEPLLTKTAKMPGLDGQKMSKSYNNAIALRE---QPASIEKKIRTMP 294


>gi|81428454|ref|YP_395454.1| 30S ribosomal protein S4 [Lactobacillus sakei subsp. sakei 23K]
 gi|90101691|sp|Q38XD6|RS4_LACSS RecName: Full=30S ribosomal protein S4
 gi|78610096|emb|CAI55145.1| 30S Ribosomal protein S4 [Lactobacillus sakei subsp. sakei 23K]
          Length = 201

 Score = 37.5 bits (86), Expect = 4.1,   Method: Composition-based stats.
 Identities = 9/58 (15%), Positives = 23/58 (39%), Gaps = 5/58 (8%)

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           + G A++  +AR+ +    + ++   +     ++K         I +    KN +I  
Sbjct: 101 RLGLASTRAQARQLVNHGHVTVDGKRVDIPSYEVKP-----GQEISIREKSKNLVIIK 153


>gi|225621051|ref|YP_002722309.1| 30S ribosomal protein S4 [Brachyspira hyodysenteriae WA1]
 gi|225215871|gb|ACN84605.1| 30S ribosomal protein S4 [Brachyspira hyodysenteriae WA1]
          Length = 189

 Score = 37.5 bits (86), Expect = 4.2,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 21/42 (50%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
            ++ + G A S N+AR+ +    I +N   ++     +K+ D
Sbjct: 83  NVVYRLGLAKSRNQARQFVAHGFISVNGKRMTIPSYCVKVGD 124


>gi|188587906|ref|YP_001922274.1| leucyl-tRNA synthetase [Clostridium botulinum E3 str. Alaska E43]
 gi|188498187|gb|ACD51323.1| leucyl-tRNA synthetase [Clostridium botulinum E3 str. Alaska E43]
          Length = 816

 Score = 37.5 bits (86), Expect = 4.2,   Method: Composition-based stats.
 Identities = 11/59 (18%), Positives = 20/59 (33%), Gaps = 8/59 (13%)

Query: 210 IDLGERLKTPKLFALTSP-LLTTASGTKMGKTLSGAIWLNK-------EMTSPYNFWQY 260
            D+G         +LT   L+    G KM K+    I  +        ++   Y  + +
Sbjct: 549 RDMGYLKFDEPFLSLTHQGLILGPDGLKMSKSKGNTISPDDYIKEFGADVFRMYLMFGF 607


>gi|169842308|ref|ZP_02875413.1| hypothetical protein cdivTM_34399 [candidate division TM7
          single-cell isolate TM7a]
          Length = 43

 Score = 37.5 bits (86), Expect = 4.2,   Method: Composition-based stats.
 Identities = 10/37 (27%), Positives = 19/37 (51%), Gaps = 1/37 (2%)

Query: 7  DFLSILSERGFIHQISNPRELDILCSQGV-VTAYIGY 42
          +    L  RG I Q++N  E+  + + G  V + +G+
Sbjct: 7  NCYEELKARGLIAQVTNEEEISKMINNGEAVMSLLGF 43


>gi|150390763|ref|YP_001320812.1| 30S ribosomal protein S4 [Alkaliphilus metalliredigens QYMF]
 gi|172052482|sp|A6TSI5|RS4B_ALKMQ RecName: Full=30S ribosomal protein S4 B
 gi|149950625|gb|ABR49153.1| RNA-binding S4 domain protein [Alkaliphilus metalliredigens QYMF]
          Length = 199

 Score = 37.5 bits (86), Expect = 4.2,   Method: Composition-based stats.
 Identities = 13/61 (21%), Positives = 24/61 (39%), Gaps = 4/61 (6%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
            L+ + GF +S  +AR+ +    I +N   +      + + D  S         +KN I 
Sbjct: 92  NLVYRTGFGSSIRQARQMVVHGHILVNGKKVDRPSFAVSVGDDISLRE----KSRKNKIF 147

Query: 414 C 414
            
Sbjct: 148 I 148


>gi|320093560|ref|ZP_08025451.1| ribosomal large subunit pseudouridine synthase B [Actinomyces sp.
           oral taxon 178 str. F0338]
 gi|319979487|gb|EFW10958.1| ribosomal large subunit pseudouridine synthase B [Actinomyces sp.
           oral taxon 178 str. F0338]
          Length = 249

 Score = 37.5 bits (86), Expect = 4.2,   Method: Composition-based stats.
 Identities = 6/47 (12%), Positives = 22/47 (46%), Gaps = 1/47 (2%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL 393
           + G+ L  ++ +AG   S   A + +    + ++  ++  + +++  
Sbjct: 8   AGGVRLQKVLAQAG-VASRRAAEQMIADGRVSVDGQVVRGQGMRVDP 53


>gi|312132030|ref|YP_003999370.1| RNA-binding s4 domain protein [Leadbetterella byssophila DSM 17132]
 gi|311908576|gb|ADQ19017.1| RNA-binding S4 domain protein [Leadbetterella byssophila DSM 17132]
          Length = 500

 Score = 37.5 bits (86), Expect = 4.2,   Method: Composition-based stats.
 Identities = 14/49 (28%), Positives = 20/49 (40%), Gaps = 1/49 (2%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           I  +G   S  EA   ++S  I +N   I+    Q+K  D    G   L
Sbjct: 274 IANSGIC-SRREADDLIESGQITVNGKTITEMGYQVKKTDVVKYGRKIL 321


>gi|306834591|ref|ZP_07467704.1| tryptophan--tRNA ligase [Streptococcus bovis ATCC 700338]
 gi|304423393|gb|EFM26546.1| tryptophan--tRNA ligase [Streptococcus bovis ATCC 700338]
          Length = 340

 Score = 37.5 bits (86), Expect = 4.2,   Method: Composition-based stats.
 Identities = 37/225 (16%), Positives = 68/225 (30%), Gaps = 32/225 (14%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKT--GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +    L +    +     +    ++               S+ I+E
Sbjct: 12  PTGK-LHLGHYVGSLKNRVLLQNEDKYDMFVFLADQQALTDHAK---------ESEIIRE 61

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
           ++  +  +    +     K+   + +    L  +    +     +    N  +  E  + 
Sbjct: 62  SVGNV-ALDYLSVGLDPAKSTIFIQSQIPELAELTMYYMNLVSLARLERNPTVKTEIAQK 120

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP-K 220
                    FL   Y I QA D      NY   + +G +DQ   I    ++        K
Sbjct: 121 GFGSSIPTGFL--MYPISQAADITAFKANY---VPVG-NDQKPMIEQTREIVRSFNHTYK 174

Query: 221 LFALTSP-----------LLTTASGT-KMGKTLSGAIWLNKEMTS 253
              L  P            L    G  KM K+L   I+L+ +  +
Sbjct: 175 TDVLVEPEGIFPENEAAGRLPGLDGNAKMSKSLGNGIYLSDDADT 219


>gi|302873551|ref|YP_003842184.1| tryptophanyl-tRNA synthetase [Clostridium cellulovorans 743B]
 gi|307688269|ref|ZP_07630715.1| tryptophanyl-tRNA synthetase [Clostridium cellulovorans 743B]
 gi|302576408|gb|ADL50420.1| tryptophanyl-tRNA synthetase [Clostridium cellulovorans 743B]
          Length = 337

 Score = 37.5 bits (86), Expect = 4.2,   Method: Composition-based stats.
 Identities = 46/309 (14%), Positives = 98/309 (31%), Gaps = 61/309 (19%)

Query: 32  SQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG----HKPISLMGGGTSIIGDPSFR 87
           ++     + G   +   L  G+    +   W++       +  I  +   T         
Sbjct: 6   TENKKVIFSGIQPSGD-LTLGNYLGALK-NWVKLQDQYECYYCIVDLHAITVR------- 56

Query: 88  DESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSF 147
            +  + +R++ ++     +             ++     +   WL  +     + E+   
Sbjct: 57  -QEPKNLRAKTLELLAIYVAAGIDPDKNTLFIQSHVPAHSEAQWL--LNCNSYIGEL--- 110

Query: 148 FSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNII 207
              +RM      + +  +  ++S    NY +L A D +     Y   L   G DQ  ++ 
Sbjct: 111 ---SRMTQ---FKDKSAKYTNVSAGLLNYPVLMAVDILL----YQTDLVPVGGDQKQHLE 160

Query: 208 CGIDLGERLKTPKLFALTSPLLT---TASG----------TKMGKTLSGAIWLNKEMTSP 254
              DL +R      ++ T  +       +G           KM K+          +  P
Sbjct: 161 LTRDLAQRFNG--AYSETFKIPEPYIPPTGARIMDLQEPTKKMSKSTENPNGCIYILDPP 218

Query: 255 YNFWQYW-RNIDDAD-VVSF-------------AKRLTTLPMSEIDRMAKLQGKEINEAK 299
               +   R + D+  VV +                +T +   EI++  K +GK   + K
Sbjct: 219 EVIRKKIARAVTDSIGVVKYSDEQPGVQNLMSILSTITGMSYDEIEK--KYEGKGYGDFK 276

Query: 300 KIIATEITT 308
           K +A  I  
Sbjct: 277 KDVAEAIVA 285


>gi|187776749|ref|ZP_02993222.1| hypothetical protein CLOSPO_00264 [Clostridium sporogenes ATCC
           15579]
 gi|187775408|gb|EDU39210.1| hypothetical protein CLOSPO_00264 [Clostridium sporogenes ATCC
           15579]
          Length = 332

 Score = 37.5 bits (86), Expect = 4.2,   Method: Composition-based stats.
 Identities = 39/186 (20%), Positives = 66/186 (35%), Gaps = 40/186 (21%)

Query: 152 RMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGID 211
           RM  ++    R    +S+S     Y +L A D +     Y+  L   G DQ  ++    D
Sbjct: 108 RMTQYKDKSQRY--GESVSAGLLTYPVLMAADILL----YNTDLVPVGKDQKQHLEITRD 161

Query: 212 LGERLKT--PKLFALTSPLLTTASG---------TKMGKTLSG---AIWLNKEMTSPYNF 257
           L +R        F +  P +  A            KM K+       I +   M  P   
Sbjct: 162 LAQRFNNLYSPTFKMPDPYIPEAGAKIMDLQDPTKKMSKSSDNENSYILI---MDPPDAI 218

Query: 258 WQYW-RNIDDAD-VVSF-------------AKRLTTLPMSEIDRMAKLQGKEINEAKKII 302
            +   R + D+  +V +                +T + M EI++  K +GK   + K  +
Sbjct: 219 RRKINRCVTDSLGIVKYTDDQPGIKNLMTILGTITGMNMEEIEK--KYEGKGYAQFKNDV 276

Query: 303 ATEITT 308
           A  I +
Sbjct: 277 AEAIIS 282


>gi|49477116|ref|YP_035418.1| tryptophanyl-tRNA synthetase [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|49328672|gb|AAT59318.1| tryptophan#tRNA ligase (tryptophanyl-tRNA synthetase) [Bacillus
           thuringiensis serovar konkukian str. 97-27]
 gi|324325299|gb|ADY20559.1| tryptophanyl-tRNA synthetase [Bacillus thuringiensis serovar
           finitimus YBT-020]
          Length = 329

 Score = 37.5 bits (86), Expect = 4.2,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 56/170 (32%), Gaps = 45/170 (26%)

Query: 174 FNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK---------------- 217
             Y  L A D +     Y+  +   G DQ  ++    DL ER                  
Sbjct: 123 LTYPPLMAADILL----YNTEIVPVGDDQKQHMELTRDLAERFNKRFREVFTIPEIRIPK 178

Query: 218 -TPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRN-IDDAD-VVSFAK 274
              ++ +LT P        KM K+      +   +  P    +  ++ + D+D +V F K
Sbjct: 179 VGARVMSLTEPT------KKMSKSDPNPKSMISMLDEPKTIEKKIKSAVTDSDGIVKFDK 232

Query: 275 R--------------LTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMV 310
                           +   + EI+ M   +GK   + K  +A  +   +
Sbjct: 233 ENKPGISNLLTIYSSFSGKTVEEIEAMY--EGKGYGDFKGDLAQVVVEAI 280


>gi|319404931|emb|CBI78531.1| lysyl-tRNA synthetase [Bartonella sp. AR 15-3]
          Length = 552

 Score = 37.5 bits (86), Expect = 4.2,   Method: Composition-based stats.
 Identities = 24/137 (17%), Positives = 43/137 (31%), Gaps = 13/137 (9%)

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           D+           +M G D   +      + + L           L     G K+ K+  
Sbjct: 250 DWAMRWTALGIDYEMAGKDLIDSTNLSSKICKILGGKPPEGFNYELFLDDKGQKISKSKG 309

Query: 243 GAI----WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTT--LPMSEIDRMAKLQGKEIN 296
             +    WL    T     + + +          AKRL    +P +  +  A L   E  
Sbjct: 310 NGLTIDEWLTYAPTESLGLYMFLK-------PKTAKRLYFDVIPKAVDEYYAHLSAYEHQ 362

Query: 297 EAKKIIATEITTMVHGR 313
           + K+ +   +  + HGR
Sbjct: 363 QWKERLNNPVWHIHHGR 379


>gi|315587144|gb|ADU41525.1| tryptophan--tRNA ligase [Helicobacter pylori 35A]
          Length = 326

 Score = 37.5 bits (86), Expect = 4.2,   Method: Composition-based stats.
 Identities = 42/235 (17%), Positives = 78/235 (33%), Gaps = 34/235 (14%)

Query: 147 FFSVNRMLSFESVR-SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGN 205
             S+  M      +   LK  +S++   FNY IL A D +     Y   L   G DQ  +
Sbjct: 98  QVSMGEMQRMTQFKDKSLKNPKSVNVGLFNYPILMASDILL----YQSDLVPVGEDQKQH 153

Query: 206 IICGIDLGERLKT--PKLFALTSPLLTTASG---------TKMGKTLSG---AIWLNKEM 251
           +    ++ E+        F +  PL+               KM K+  G   AI+L  E 
Sbjct: 154 LELTRNIAEKFNRDFGSCFKVPEPLIAKVGARVMGLDDPKVKMSKSHQGANHAIFLLDEP 213

Query: 252 TSPYNFWQYWRNID------DAD------VVSFAKRLTTLPMSEIDRMAKLQGKEINEAK 299
                  +            D        +++    L+      I+   K +G    + K
Sbjct: 214 DIIARKIKKAATDSTGVIAFDEKREGVFNLLNIYMLLSNESPENIEERFKNKG--YGDFK 271

Query: 300 KIIATEITTMVHG-REEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLL 353
           K +A  +   +   +E  ++ +   ++        +  P    +  +    MGL+
Sbjct: 272 KELAEVVIQALKPIQERYKEISDDEVKAVLNGGVKKARPLAQATYQKAKELMGLV 326


>gi|198426084|ref|XP_002125959.1| PREDICTED: similar to vacuolar protein sorting 53 isoform 1 [Ciona
           intestinalis]
          Length = 846

 Score = 37.5 bits (86), Expect = 4.2,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 42/120 (35%), Gaps = 19/120 (15%)

Query: 262 RNIDDADVVSFAKRL--TTLPMSEIDRMAKLQGKEI----NEAKKIIATEITTMVHGREE 315
               D DVV +   L  T   +S ID +      +I    ++ K  +  + T  + G+  
Sbjct: 41  LEQSDFDVVRYINELFPTEQSLSNIDDVVNRVEAKITQVDHDIKTAVRRQTTAGIDGQAS 100

Query: 316 AEKAATAAMECFDM-SIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKS 374
            E+A TA  E F                  E++R +  L L            A+R+L  
Sbjct: 101 LEEAQTAIHELFAKIKNIKDRAEQSEQMVKEITRDIKQLDL------------AKRNLTQ 148


>gi|167957551|ref|ZP_02544625.1| ribosomal protein S4 [candidate division TM7 single-cell isolate
           TM7c]
          Length = 205

 Score = 37.5 bits (86), Expect = 4.2,   Method: Composition-based stats.
 Identities = 15/59 (25%), Positives = 25/59 (42%), Gaps = 8/59 (13%)

Query: 348 RGMGLLTLI--------VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
            G  LL L+         +AGFA+S   AR+ +      +N   +    +++K  D  S
Sbjct: 83  AGENLLQLLERRLDNAVYRAGFASSRRAARQLVSHGHFILNGRRVDIPSIRLKAGDEIS 141


>gi|312221335|emb|CBY01275.1| similar to tryptophanyl-tRNA synthetase [Leptosphaeria maculans]
          Length = 492

 Score = 37.5 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 20/48 (41%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLM 74
           LD+      +  Y G   ++ ++H GH        WLQ     P+ +M
Sbjct: 97  LDLYERGEDILLYTGRGPSSDAMHIGHTIPFEFTKWLQDVFDVPLVIM 144


>gi|269114915|ref|YP_003302678.1| ribosomal large subunit pseudouridine synthase D [Mycoplasma
           hominis]
 gi|268322540|emb|CAX37275.1| Ribosomal large subunit pseudouridine synthaseD (RNA
           pseudouridylate synthase, RNA-uridine isomerase )
           [Mycoplasma hominis ATCC 23114]
          Length = 297

 Score = 37.5 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 8/40 (20%), Positives = 19/40 (47%)

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
           S N+ +  +++ A+ +N+  I+  K  +K  D      + 
Sbjct: 23  SRNDIKELIENGAVFVNSIKINKPKFVVKEGDEILIERLL 62


>gi|313669042|ref|YP_004049326.1| hypothetical protein NLA_17640 [Neisseria lactamica ST-640]
 gi|261393165|emb|CAX50777.1| conserved hypothetical protein [Neisseria meningitidis 8013]
 gi|313006504|emb|CBN87968.1| conserved hypothetical protein [Neisseria lactamica 020-06]
          Length = 77

 Score = 37.5 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 10/53 (18%), Positives = 22/53 (41%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
           E +  + L  L+  AG A S  +A+  +    +  N    + +  +I+  +  
Sbjct: 8   EDNEYIALCDLLKLAGLAESGGQAKAFIAEGLVLRNGETETRKTAKIRGGEVI 60


>gi|268680239|ref|YP_003304670.1| leucyl-tRNA synthetase [Sulfurospirillum deleyianum DSM 6946]
 gi|268618270|gb|ACZ12635.1| leucyl-tRNA synthetase [Sulfurospirillum deleyianum DSM 6946]
          Length = 815

 Score = 37.5 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 20/132 (15%), Positives = 43/132 (32%), Gaps = 16/132 (12%)

Query: 210 IDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLN-------KEMTSPYNFW---- 258
            DLG          L +  +    G+KM K+    +  +        +    +  +    
Sbjct: 558 RDLGYVNTDEPFANLLTQGMVLKDGSKMSKSKGNTVDPDAIIKTYGADTARLFILFAAPP 617

Query: 259 QYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEK 318
           Q     +D+ V    + L        +     +  +IN A   ++ E     + R++  +
Sbjct: 618 QKELEWNDSAVEGAFRFLKRFAQKSENAFTCKKIPDINHA--TLSKESK---YARKKVYE 672

Query: 319 AATAAMECFDMS 330
           A   + E F+  
Sbjct: 673 ALKKSNEIFEGG 684


>gi|116873631|ref|YP_850412.1| tryptophanyl-tRNA synthetase [Listeria welshimeri serovar 6b str.
           SLCC5334]
 gi|116742509|emb|CAK21633.1| tryptophanyl-tRNA synthetase [Listeria welshimeri serovar 6b str.
           SLCC5334]
          Length = 331

 Score = 37.5 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 35/222 (15%), Positives = 67/222 (30%), Gaps = 45/222 (20%)

Query: 143 EIGSFFSVNRMLSFES----------VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYD 192
           E+ +      +L               + +   +  +S     Y  L A D + L +   
Sbjct: 83  EVAAHAQAAWILQCNVYIGELERMTQFKDKSDGKAGVSAGLLTYPPLMAADIL-LYQTNL 141

Query: 193 CRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-----------TKMGKT- 240
             +   G DQ  +I    DL +R         T P +                 KM K+ 
Sbjct: 142 VPV---GEDQKQHIELTRDLADRFNKKHADIFTMPEVFIPKQGARVMSLQDPTKKMSKSD 198

Query: 241 --LSGAIWLNKEMTSPYNFWQYWRN-IDDAD------------VVSFAKRLTTLPMSEID 285
             L  AI+L   +  P    +  ++ + D+             V +     + +    I 
Sbjct: 199 ANLKNAIFL---LDPPATIRKKIKSAVTDSSGIIEYNKEEKPGVSNLLTIYSVVTGETIA 255

Query: 286 RMAKL-QGKEINEAKKIIATEITTMVHGREEAEKAATAAMEC 326
            + +   GK   + K  +A  +   +   +E   A   + E 
Sbjct: 256 SIEEKYVGKGYGDFKTDLAELVVAELEPIQEKYYAYLESEEL 297


>gi|14521895|ref|NP_127372.1| tryptophanyl-tRNA synthetase [Pyrococcus abyssi GE5]
 gi|17367824|sp|Q9UY11|SYW_PYRAB RecName: Full=Tryptophanyl-tRNA synthetase; AltName:
           Full=Tryptophan--tRNA ligase; Short=TrpRS
 gi|5459115|emb|CAB50601.1| trpS tryptophanyl-tRNA synthetase [Pyrococcus abyssi GE5]
          Length = 385

 Score = 37.5 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 43/254 (16%), Positives = 72/254 (28%), Gaps = 32/254 (12%)

Query: 15  RGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           R F     +  + L           Y G   +   +H GH+       WLQ+     + +
Sbjct: 52  RKFFFSHRDYDKVLQDYEEGRGFFLYTGRGPSGP-MHIGHIIPFFATKWLQEKFGVNLYI 110

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
                  I D         +          E I  I +             +  N  +  
Sbjct: 111 ------QITDDEKFLFKENLTFEDTKHWAYENILDIIAVGFDPDKT----FIFQNSEFTK 160

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDC 193
                ++   I     +N  ++          +  +  + F   I  A  F E  +   C
Sbjct: 161 ---IYEMAIPIAKK--INFSMAKAVFG--FTEQSKIGMI-FFPAIQIAPTFFEKRR---C 209

Query: 194 RLQMGGSDQWGNIICGIDLGE---RLKTPKLFALTSPLLTTASGTKMGKTLSG-AIWLNK 249
            +     DQ        D  E     KT  + +   P LT+ SG KM  +    AI+L  
Sbjct: 210 LIP-AAIDQDPYWRLQRDFAESLGYYKTAAIHSKFVPSLTSLSG-KMSASKPETAIYLT- 266

Query: 250 EMTSPYNFWQYWRN 263
              SP +  +    
Sbjct: 267 --DSPEDVEKKVWK 278


>gi|89067930|ref|ZP_01155374.1| ribosomal large subunit pseudouridine synthase D [Oceanicola
           granulosus HTCC2516]
 gi|89046528|gb|EAR52584.1| ribosomal large subunit pseudouridine synthase D [Oceanicola
           granulosus HTCC2516]
          Length = 341

 Score = 37.5 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 7/32 (21%), Positives = 17/32 (53%)

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           S +   R +   A++IN  ++++ K ++   D
Sbjct: 33  SRSRLARLVPDGAVRINGVVVTDVKARLGEGD 64


>gi|189501185|ref|YP_001960655.1| 30S ribosomal protein S4 [Chlorobium phaeobacteroides BS1]
 gi|226697822|sp|B3EP35|RS4_CHLPB RecName: Full=30S ribosomal protein S4
 gi|189496626|gb|ACE05174.1| ribosomal protein S4 [Chlorobium phaeobacteroides BS1]
          Length = 203

 Score = 37.5 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 22/55 (40%), Gaps = 8/55 (14%)

Query: 349 GMGLLTLI--------VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           G  L+ L+         +AGF+ S   AR+ +    + IN   +      +K  D
Sbjct: 84  GDNLVKLLERRFDNVVFRAGFSPSRAGARQLVTHGHLLINGKKVDIPSYLLKPGD 138


>gi|319940917|ref|ZP_08015255.1| S4 domain-containing protein [Sutterella wadsworthensis 3_1_45B]
 gi|319805633|gb|EFW02421.1| S4 domain-containing protein [Sutterella wadsworthensis 3_1_45B]
          Length = 75

 Score = 37.5 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 9/46 (19%), Positives = 20/46 (43%)

Query: 340 SISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIIS 385
            +        + L  L+  AG A +  EA+  ++   +K+N  + +
Sbjct: 4   EVQFALKGEYITLDALMKAAGLAGTGGEAKVRIQGGEVKVNGEVET 49


>gi|308183363|ref|YP_003927490.1| tryptophanyl-tRNA synthetase [Helicobacter pylori PeCan4]
 gi|308065548|gb|ADO07440.1| tryptophanyl-tRNA synthetase [Helicobacter pylori PeCan4]
          Length = 326

 Score = 37.5 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 42/238 (17%), Positives = 79/238 (33%), Gaps = 40/238 (16%)

Query: 147 FFSVNRMLSFESVR-SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGN 205
             S+  M      +   LK  +S++   FNY IL A D +     Y   L   G DQ  +
Sbjct: 98  QVSMGEMQRMTQFKDKSLKNPKSVNVGLFNYPILMASDILL----YQSDLVPVGEDQKQH 153

Query: 206 IICGIDLGERLKT--PKLFALTSPLLTTASG---------TKMGKTLSG---AIWLNKEM 251
           +    ++ E+        F +  PL+               KM K+  G   AI+L   +
Sbjct: 154 LELTRNIAEKFNRDFGSCFKVPEPLIAKVGARVMGLDDPKVKMSKSHQGANHAIFL---L 210

Query: 252 TSPYNFWQYWRNIDDADV---------------VSFAKRLTTLPMSEIDRMAKLQGKEIN 296
             P    +  +      V               ++    L+      I+   K +G    
Sbjct: 211 DEPDIIVRKIKKAATDSVGVIAFDEKREGVFNLLNIYMLLSNESPENIEERFKNKG--YG 268

Query: 297 EAKKIIATEITTMVHG-REEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLL 353
           + KK +A  +   +   +E  ++ +   ++        +  P    +  +    MGL+
Sbjct: 269 DFKKELAEVVIQALKPIQERYKEISDDEVKAVLNGGVKKARPLAQATYQKAKELMGLV 326


>gi|296137862|ref|YP_003645105.1| RNA-binding S4 domain protein [Tsukamurella paurometabola DSM
           20162]
 gi|296025996|gb|ADG76766.1| RNA-binding S4 domain protein [Tsukamurella paurometabola DSM
           20162]
          Length = 80

 Score = 37.5 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 11/70 (15%), Positives = 27/70 (38%), Gaps = 2/70 (2%)

Query: 340 SISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS- 398
           +I  +     + L   +  AG   S  EA+  +    + +N  + +    Q+ + D    
Sbjct: 11  AIDVEISDEVIRLGQFLKLAGLIDSGAEAKGVIADGEVSVNGEVDTRRGRQLAVGDVVEV 70

Query: 399 -TGNIKLSFG 407
              + +++ G
Sbjct: 71  FGRSARVARG 80


>gi|293376356|ref|ZP_06622593.1| ribosomal protein S4 [Turicibacter sanguinis PC909]
 gi|292645045|gb|EFF63118.1| ribosomal protein S4 [Turicibacter sanguinis PC909]
          Length = 169

 Score = 37.5 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 8/48 (16%), Positives = 18/48 (37%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
            L+ + G A +  +AR+ +    I ++   +      +K     S   
Sbjct: 65  NLVYRLGLAATRRQARQLVNHGHITVDGKRVDIPSYSVKPGQTISLRE 112


>gi|237755405|ref|ZP_04584032.1| ribosomal large subunit pseudouridine synthase B
           [Sulfurihydrogenibium yellowstonense SS-5]
 gi|237692446|gb|EEP61427.1| ribosomal large subunit pseudouridine synthase B
           [Sulfurihydrogenibium yellowstonense SS-5]
          Length = 244

 Score = 37.5 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 28/62 (45%), Gaps = 3/62 (4%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD--FDSTGNIKLSFGKKNHII 413
           I ++G   S  +A   +K   +K+N  II +   +I  +    +  GNI     KK +I 
Sbjct: 9   IAQSGIC-SRRKADELIKEGIVKVNGEIIKDLGAKINPEKDVVEVEGNIIKPVEKKIYIK 67

Query: 414 CH 415
            +
Sbjct: 68  IY 69


>gi|167761342|ref|ZP_02433469.1| hypothetical protein CLOSCI_03750 [Clostridium scindens ATCC 35704]
 gi|167661008|gb|EDS05138.1| hypothetical protein CLOSCI_03750 [Clostridium scindens ATCC 35704]
          Length = 247

 Score = 37.5 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 10/54 (18%), Positives = 18/54 (33%), Gaps = 9/54 (16%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
           +  AG   S  EA R ++S  + ++          +          +    GKK
Sbjct: 8   LSDAGVC-SRREADRLIESGQVSVDGQR------AVPGMKVADGQEV--KVGKK 52


>gi|160871805|ref|ZP_02061937.1| ribosomal protein S4 [Rickettsiella grylli]
 gi|159120604|gb|EDP45942.1| ribosomal protein S4 [Rickettsiella grylli]
          Length = 206

 Score = 37.5 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 8/61 (13%)

Query: 349 GMGLLTLI--------VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG 400
           G  LL L+         + GFA++  EAR+ +   A+K+N++I++    Q+K+ D     
Sbjct: 87  GENLLKLLECRLDNVVYRMGFASTRAEARQLVSHRAVKVNSTIVNIPSYQVKVGDVIEIK 146

Query: 401 N 401
            
Sbjct: 147 E 147


>gi|91205136|ref|YP_537491.1| ribosomal large subunit pseudouridine synthase [Rickettsia bellii
           RML369-C]
 gi|157827531|ref|YP_001496595.1| ribosomal large subunit pseudouridine synthase [Rickettsia bellii
           OSU 85-389]
 gi|122425930|sp|Q1RJR2|Y321_RICBR RecName: Full=Uncharacterized RNA pseudouridine synthase RBE_0321;
           AltName: Full=RNA pseudouridylate synthase; AltName:
           Full=RNA-uridine isomerase
 gi|91068680|gb|ABE04402.1| Ribosomal large subunit pseudouridine synthase [Rickettsia bellii
           RML369-C]
 gi|157802835|gb|ABV79558.1| Ribosomal large subunit pseudouridine synthase [Rickettsia bellii
           OSU 85-389]
          Length = 229

 Score = 37.5 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 20/44 (45%), Gaps = 1/44 (2%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           L  LI  AG   S  +A + +    +K+N  I+++    +   +
Sbjct: 4   LAKLISNAGIC-SRRDAEKLILDGQVKVNGIIVTSPATNVDTDN 46


>gi|78484663|ref|YP_390588.1| ribosomal protein S4 [Thiomicrospira crunogena XCL-2]
 gi|90101733|sp|Q31IV9|RS4_THICR RecName: Full=30S ribosomal protein S4
 gi|78362949|gb|ABB40914.1| SSU ribosomal protein S4P [Thiomicrospira crunogena XCL-2]
          Length = 206

 Score = 37.5 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 29/63 (46%), Gaps = 8/63 (12%)

Query: 347 SRGMGLLTLI--------VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
           S G+ LL L+         + GFA++  EAR+ +   +I++N   ++    ++   D  S
Sbjct: 85  STGVNLLQLLESRLDNVVYRMGFASTRAEARQLVSHKSIQVNGQSVNIPSYEVSAGDVIS 144

Query: 399 TGN 401
              
Sbjct: 145 IRE 147


>gi|326803755|ref|YP_004321573.1| ribosomal protein S4 [Aerococcus urinae ACS-120-V-Col10a]
 gi|326650742|gb|AEA00925.1| ribosomal protein S4 [Aerococcus urinae ACS-120-V-Col10a]
          Length = 203

 Score = 37.5 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 5/44 (11%), Positives = 17/44 (38%)

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
           + G A++  +AR+ +    I ++   +      +++        
Sbjct: 102 RLGLASTRRQARQLVSHGHITVDGKRVDIPSYIVEVGQVIGVRE 145


>gi|195941556|ref|ZP_03086938.1| valyl-tRNA synthetase [Borrelia burgdorferi 80a]
 gi|312149539|gb|ADQ29610.1| valyl-tRNA synthetase [Borrelia burgdorferi N40]
          Length = 875

 Score = 37.5 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 21/40 (52%), Gaps = 2/40 (5%)

Query: 206 IICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI 245
           ++ G++  E++    ++   +PLL    G KM K+L   I
Sbjct: 496 VMAGLEFTEQVPFKDVYI--TPLLRDKQGKKMSKSLGNGI 533


>gi|168182044|ref|ZP_02616708.1| tryptophan--tRNA ligase [Clostridium botulinum Bf]
 gi|237796771|ref|YP_002864323.1| tryptophanyl-tRNA synthetase [Clostridium botulinum Ba4 str. 657]
 gi|182674858|gb|EDT86819.1| tryptophan--tRNA ligase [Clostridium botulinum Bf]
 gi|229263587|gb|ACQ54620.1| tryptophan--tRNA ligase [Clostridium botulinum Ba4 str. 657]
          Length = 332

 Score = 37.5 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 39/186 (20%), Positives = 66/186 (35%), Gaps = 40/186 (21%)

Query: 152 RMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGID 211
           RM  ++    R    +S+S     Y +L A D +     Y+  L   G DQ  ++    D
Sbjct: 108 RMTQYKDKSQRY--GESVSAGLLTYPVLMAADILL----YNTDLVPVGKDQKQHLEITRD 161

Query: 212 LGERLKT--PKLFALTSPLLTTASG---------TKMGKTLSG---AIWLNKEMTSPYNF 257
           L +R        F +  P +  A            KM K+       I +   M  P   
Sbjct: 162 LAQRFNNLYSPTFKIPEPYIPEAGAKIMDLQDPTKKMSKSSDNENSYILI---MDPPDAI 218

Query: 258 WQYW-RNIDDAD-VVSF-------------AKRLTTLPMSEIDRMAKLQGKEINEAKKII 302
            +   R + D+  +V +                +T + M EI++  K +GK   + K  +
Sbjct: 219 RRKISRCVTDSLGIVKYTDEQPGIKNLMTILSTITGMTMEEIEK--KYEGKGYAQFKNDV 276

Query: 303 ATEITT 308
           A  I +
Sbjct: 277 AEAIIS 282


>gi|306828607|ref|ZP_07461801.1| tryptophan--tRNA ligase [Streptococcus mitis ATCC 6249]
 gi|304429215|gb|EFM32301.1| tryptophan--tRNA ligase [Streptococcus mitis ATCC 6249]
          Length = 341

 Score = 37.5 bits (86), Expect = 4.4,   Method: Composition-based stats.
 Identities = 41/244 (16%), Positives = 71/244 (29%), Gaps = 42/244 (17%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKT--GHKPISLMGG---GTSIIGDPSFRDESRRMMRSQE 98
            T   LH GH    +    L +    ++    +      T    DP              
Sbjct: 12  PTGK-LHIGHYVGSLKNRVLLQEEDKYEMFVFLADQQALTDHAKDPQ------------T 58

Query: 99  IQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
           I E+I  +  +    +     K+   + +    L  +    +     +    N  +  E 
Sbjct: 59  IVESIGNV-ALDYLAVGLDPSKSTIFIQSQIPELAELSMYYMNLVSLARLERNPTVKTEI 117

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
            +          FL   Y I QA D      NY   + +G +DQ   I    ++      
Sbjct: 118 AQKGFGESIPTGFL--VYPIAQAADITAFKANY---VPVG-TDQKPMIEQTREIVRSFNH 171

Query: 219 P-KLFALTSP-----------LLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNI- 264
                 L  P            L    G  KM K+L+  I+L  +  +     +   ++ 
Sbjct: 172 AYNCDVLVEPEGIYPENERAGRLPGLDGNAKMSKSLNNGIYLADDADT---LRKKVMSMY 228

Query: 265 DDAD 268
            D D
Sbjct: 229 TDPD 232


>gi|261839972|gb|ACX99737.1| tryptophanyl-tRNA synthetase [Helicobacter pylori 52]
          Length = 326

 Score = 37.5 bits (86), Expect = 4.4,   Method: Composition-based stats.
 Identities = 42/235 (17%), Positives = 78/235 (33%), Gaps = 34/235 (14%)

Query: 147 FFSVNRMLSFESVR-SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGN 205
             S+  M      +   LK  +S++   FNY IL A D +     Y   L   G DQ  +
Sbjct: 98  QVSMGEMQRMTQFKDKSLKNPKSVNVGLFNYPILMASDILL----YQSDLVPVGEDQKQH 153

Query: 206 IICGIDLGERLKT--PKLFALTSPLLTTASG---------TKMGKTLSG---AIWLNKEM 251
           +    ++ E+        F +  PL+               KM K+  G   AI+L  E 
Sbjct: 154 LELTRNIAEKFNRDFGSCFKVPEPLIAKVGARVMGLDDPKVKMSKSHQGANHAIFLLDEP 213

Query: 252 TSPYNFWQYWRNID------DAD------VVSFAKRLTTLPMSEIDRMAKLQGKEINEAK 299
                  +            D        +++    L+      I+   K +G    + K
Sbjct: 214 DIIARKIKKAATDSTGVIAFDEKREGVFNLLNIYMLLSNESPENIEERFKNKG--YGDFK 271

Query: 300 KIIATEITTMVHG-REEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLL 353
           K +A  +   +   +E  ++ +   ++        +  P    +  +    MGL+
Sbjct: 272 KELAEVVIQALKPIQERYKEISDDEVKAVLNGGVKKAKPLAQATYQKAKELMGLV 326


>gi|240047378|ref|YP_002960766.1| 30S ribosomal protein S4 [Mycoplasma conjunctivae HRC/581]
 gi|239984950|emb|CAT04943.1| 30S ribosomal protein S4 [Mycoplasma conjunctivae]
          Length = 206

 Score = 37.5 bits (86), Expect = 4.4,   Method: Composition-based stats.
 Identities = 15/90 (16%), Positives = 34/90 (37%), Gaps = 6/90 (6%)

Query: 320 ATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKI 379
                  F+ +I    +   +  +   SR   ++    ++GFA +  +AR+ +      +
Sbjct: 68  EKQFRNTFNKAIKKPGIAGTNFLQALESRFDNVVY---RSGFAETRKQARQLVNHGHFLL 124

Query: 380 NNSIISNEKLQIKLQD---FDSTGNIKLSF 406
           N   ++   +Q+K  D     S    K+  
Sbjct: 125 NGKKVNIPSIQLKPGDSFELTSKKEGKIRK 154


>gi|144897623|emb|CAM74487.1| 16S rRNA uridine-516 pseudouridylate synthase and related
           pseudouridylate synthases [Magnetospirillum
           gryphiswaldense MSR-1]
          Length = 287

 Score = 37.5 bits (86), Expect = 4.4,   Method: Composition-based stats.
 Identities = 9/65 (13%), Positives = 24/65 (36%), Gaps = 1/65 (1%)

Query: 333 SQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
           S+     + +  E      +   + +AG   S  +A + + S  + +N  ++ +    + 
Sbjct: 2   SEDTIAATDTLPETEEKERIAKRLARAGIC-SRRDAEKLITSRKVAVNGVVLESPAFLVG 60

Query: 393 LQDFD 397
             D  
Sbjct: 61  PGDRI 65


>gi|119897819|ref|YP_933032.1| hypothetical protein azo1528 [Azoarcus sp. BH72]
 gi|119670232|emb|CAL94145.1| conserved hypothetical protein [Azoarcus sp. BH72]
          Length = 74

 Score = 37.5 bits (86), Expect = 4.4,   Method: Composition-based stats.
 Identities = 8/32 (25%), Positives = 17/32 (53%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINN 381
           + L  L+  A   +S  EA   +++ A+K++ 
Sbjct: 12  IQLDQLLKAANLVSSGGEAHAAVEAGAVKVDG 43


>gi|332655117|ref|ZP_08420858.1| ribosomal protein S4 [Ruminococcaceae bacterium D16]
 gi|332515977|gb|EGJ45586.1| ribosomal protein S4 [Ruminococcaceae bacterium D16]
          Length = 200

 Score = 37.5 bits (86), Expect = 4.4,   Method: Composition-based stats.
 Identities = 9/48 (18%), Positives = 19/48 (39%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
            ++ + GFA +  EAR+ +      +N   +      +K+ D      
Sbjct: 93  NVVYRLGFAMTRREARQLVTHGHFTVNGQRVDIPSFLVKVGDVIEVRE 140


>gi|111221683|ref|YP_712477.1| pseudouridylate synthase [Frankia alni ACN14a]
 gi|111149215|emb|CAJ60900.1| Pseudouridylate synthase [Frankia alni ACN14a]
          Length = 254

 Score = 37.5 bits (86), Expect = 4.4,   Method: Composition-based stats.
 Identities = 9/79 (11%), Positives = 23/79 (29%), Gaps = 9/79 (11%)

Query: 342 SKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD---S 398
                  G+ L  ++  AG   S       +    + ++  ++  +  ++  +       
Sbjct: 7   PASAADEGIRLQKVLASAGI-GSRRRGEELIAEGRVSVDGVVVREQGRRVNPETAIIEVD 65

Query: 399 TGNIKLSFGKKNHIICHLC 417
              I    G     + HL 
Sbjct: 66  GDRIVTRTG-----LVHLA 79


>gi|325269509|ref|ZP_08136125.1| 30S ribosomal protein S4 [Prevotella multiformis DSM 16608]
 gi|324988128|gb|EGC20095.1| 30S ribosomal protein S4 [Prevotella multiformis DSM 16608]
          Length = 202

 Score = 37.5 bits (86), Expect = 4.5,   Method: Composition-based stats.
 Identities = 12/82 (14%), Positives = 30/82 (36%), Gaps = 3/82 (3%)

Query: 320 ATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKI 379
                  FD +  +  + T  +    +   +    ++ + G A +   AR+ +    I +
Sbjct: 65  ERQFRNLFDKAAKADGI-TGEVLLQSLESRLD--NVVFRLGIAPTRAAARQLVSHKHIVV 121

Query: 380 NNSIISNEKLQIKLQDFDSTGN 401
           N ++++    Q+K  D      
Sbjct: 122 NGNVVNIASYQVKAGDVVGVRE 143


>gi|317177995|dbj|BAJ55784.1| tryptophanyl-tRNA synthetase [Helicobacter pylori F16]
          Length = 326

 Score = 37.5 bits (86), Expect = 4.5,   Method: Composition-based stats.
 Identities = 42/235 (17%), Positives = 78/235 (33%), Gaps = 34/235 (14%)

Query: 147 FFSVNRMLSFESVR-SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGN 205
             S+  M      +   LK  +S++   FNY IL A D +     Y   L   G DQ  +
Sbjct: 98  QVSMGEMQRMTQFKDKSLKNPKSVNVGLFNYPILMASDILL----YQSDLVPVGEDQKQH 153

Query: 206 IICGIDLGERLKT--PKLFALTSPLLTTASG---------TKMGKTLSG---AIWLNKEM 251
           +    ++ E+        F +  PL+               KM K+  G   AI+L  E 
Sbjct: 154 LELTRNIAEKFNRDFGNCFKVPEPLIAKVGARVMGLDDPKVKMSKSHQGANHAIFLLDEP 213

Query: 252 TSPYNFWQYWRNID------DAD------VVSFAKRLTTLPMSEIDRMAKLQGKEINEAK 299
                  +            D        +++    L+      I+   K +G    + K
Sbjct: 214 DIIARKIKKAATDSMGVIAFDEKREGVFNLLNIYMLLSNESPENIEERFKNKG--YGDFK 271

Query: 300 KIIATEITTMVHG-REEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLL 353
           K +A  +   +   +E  ++ +   ++        +  P    +  +    MGL+
Sbjct: 272 KELAEVVIQALKPIQERYKEISDDEVKAVLNGGAKKARPLAQATYQKAKELMGLV 326


>gi|298369653|ref|ZP_06980970.1| S4 RNA-binding domain protein [Neisseria sp. oral taxon 014 str.
           F0314]
 gi|298282210|gb|EFI23698.1| S4 RNA-binding domain protein [Neisseria sp. oral taxon 014 str.
           F0314]
          Length = 77

 Score = 37.5 bits (86), Expect = 4.5,   Method: Composition-based stats.
 Identities = 10/53 (18%), Positives = 22/53 (41%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
           E +  + L  L+  AG A S  +A+  +    +  N    + +  +I+  +  
Sbjct: 8   EDNEYIALCDLLKLAGLAESGGQAKAFIAEGLVLRNGETETRKTAKIRGGEVI 60


>gi|209809766|ref|YP_002265305.1| tryptophanyl-tRNA synthetase II [Aliivibrio salmonicida LFI1238]
 gi|208011329|emb|CAQ81780.1| putative tryptophanyl-tRNA synthetase [Aliivibrio salmonicida
           LFI1238]
          Length = 345

 Score = 37.5 bits (86), Expect = 4.5,   Method: Composition-based stats.
 Identities = 37/217 (17%), Positives = 62/217 (28%), Gaps = 38/217 (17%)

Query: 49  LHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMR-SQEIQENIEKIK 107
           LH GH    +      +  ++   L+     +       D      + S  I   +    
Sbjct: 28  LHLGHFIGSLQQRVELQHQYEQTILVADLQGL------TDNGHNPHKVSSNILNVVADYL 81

Query: 108 GIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRM-----LSFESVRSR 162
            +          KT   + +    L  +          +  SV R+     +  E     
Sbjct: 82  AVG-----IDPLKTTICLQSAIPALSELTMY-----YSNLVSVARLQRNPTVKNEIANKS 131

Query: 163 LKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK---TP 219
                   FL   Y I QA D       +   L   G DQ   I    ++  +L      
Sbjct: 132 FGSSIPTGFL--TYPISQAADITA----FKATLIPVGDDQLPMIEQTNEIVRKLNHIAQE 185

Query: 220 KLFALTSPLLTT------ASGT-KMGKTLSGAIWLNK 249
           ++     PLL+         G  KM K++   I L+ 
Sbjct: 186 EVLVECRPLLSKMPRLPSVDGKSKMSKSMGNCILLSS 222


>gi|116629543|ref|YP_814715.1| 16S rRNA uridine-516 pseudouridylate synthase related enzyme
           [Lactobacillus gasseri ATCC 33323]
 gi|116095125|gb|ABJ60277.1| ribosomal large subunit pseudouridine synthase B [Lactobacillus
           gasseri ATCC 33323]
          Length = 245

 Score = 37.5 bits (86), Expect = 4.5,   Method: Composition-based stats.
 Identities = 9/44 (20%), Positives = 21/44 (47%), Gaps = 1/44 (2%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           L  +I +AG   S  +A + + +  + +N   I+    +++  D
Sbjct: 11  LQKVIAQAG-VASRRKAEKMISAGQVTVNGKKITELGTKVEPSD 53


>gi|109946852|ref|YP_664080.1| tryptophanyl-tRNA synthetase [Helicobacter acinonychis str. Sheeba]
 gi|109714073|emb|CAJ99081.1| trpS [Helicobacter acinonychis str. Sheeba]
          Length = 330

 Score = 37.5 bits (86), Expect = 4.5,   Method: Composition-based stats.
 Identities = 37/190 (19%), Positives = 63/190 (33%), Gaps = 37/190 (19%)

Query: 147 FFSVNRMLSFESVR-SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGN 205
             S+  M      +   LK  +S++   FNY IL A D +     Y   L   G DQ  +
Sbjct: 102 QVSMGEMQRMTQFKDKSLKNPKSVNVGLFNYPILMASDILL----YQSDLVPVGEDQKQH 157

Query: 206 IICGIDLGERLKT--PKLFALTSPLLTTASG---------TKMGKTLSG---AIWLNKEM 251
           +    ++ E+        F +  PL+               KM K+  G   AI+L  E 
Sbjct: 158 LELTRNIAEKFNRDFGDCFKVPEPLIAKVGARVMGLDEPQVKMSKSHKGVNHAIFLLDEP 217

Query: 252 TSPYNFWQYWRNIDDAD--------------VVSFAKRLTTLPMSEIDRMAKLQGKEINE 297
                  +      D+               +++    L+      I+   + +G    +
Sbjct: 218 DIIVRKIKK--ATTDSIGTIQFDAAREGIFNLLNIYMLLSGESQENIEERFRNKG--YGD 273

Query: 298 AKKIIATEIT 307
            KK +A  I 
Sbjct: 274 FKKELAEVII 283


>gi|152967064|ref|YP_001362848.1| pseudouridine synthase [Kineococcus radiotolerans SRS30216]
 gi|151361581|gb|ABS04584.1| pseudouridine synthase [Kineococcus radiotolerans SRS30216]
          Length = 322

 Score = 37.5 bits (86), Expect = 4.5,   Method: Composition-based stats.
 Identities = 7/47 (14%), Positives = 21/47 (44%), Gaps = 1/47 (2%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL 393
             G+ L  ++ +AG A S       + +  + ++  +++   ++I  
Sbjct: 82  PEGVRLQKVLAQAG-AGSRRACEEMIAAGRVTVDGEVVTELGVRIDP 127


>gi|315500441|ref|YP_004089244.1| RNA-binding s4 domain protein [Asticcacaulis excentricus CB 48]
 gi|315418453|gb|ADU15093.1| RNA-binding S4 domain protein [Asticcacaulis excentricus CB 48]
          Length = 658

 Score = 37.5 bits (86), Expect = 4.5,   Method: Composition-based stats.
 Identities = 9/46 (19%), Positives = 18/46 (39%), Gaps = 1/46 (2%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
           +  ++ +AG A S  E  R +    I +N  ++      +   D  
Sbjct: 48  IAKVLARAGLA-SRREVERLIGLGKIAVNGRLLDTPATTVSPDDLI 92


>gi|261838576|gb|ACX98342.1| tryptophanyl-tRNA synthetase [Helicobacter pylori 51]
          Length = 326

 Score = 37.5 bits (86), Expect = 4.5,   Method: Composition-based stats.
 Identities = 42/235 (17%), Positives = 78/235 (33%), Gaps = 34/235 (14%)

Query: 147 FFSVNRMLSFESVR-SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGN 205
             S+  M      +   LK  +S++   FNY IL A D +     Y   L   G DQ  +
Sbjct: 98  QVSMGEMQRMTQFKDKSLKNPKSVNVGLFNYPILMASDILL----YQSDLVPVGEDQKQH 153

Query: 206 IICGIDLGERLKT--PKLFALTSPLLTTASG---------TKMGKTLSG---AIWLNKEM 251
           +    ++ E+        F +  PL+               KM K+  G   AI+L  E 
Sbjct: 154 LELTRNIAEKFNRDFGSCFKVPEPLIAKVGARVMGLDDPKVKMSKSHQGANHAIFLLDEP 213

Query: 252 TSPYNFWQYWRNID------DAD------VVSFAKRLTTLPMSEIDRMAKLQGKEINEAK 299
                  +            D        +++    L+      I+   K +G    + K
Sbjct: 214 DIIARKIKKAATDSMGVIAFDEKREGVFNLLNIYMLLSNESPENIEERFKNKG--YGDFK 271

Query: 300 KIIATEITTMVHG-REEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLL 353
           K +A  +   +   +E  ++ +   ++        +  P    +  +    MGL+
Sbjct: 272 KELAEVVIQALKPIQERYKEISDDEVKAVLNGGAKKARPLAQATYQKAKELMGLV 326


>gi|260424802|ref|ZP_05733345.2| cysteine--tRNA ligase [Dialister invisus DSM 15470]
 gi|260403249|gb|EEW96796.1| cysteine--tRNA ligase [Dialister invisus DSM 15470]
          Length = 488

 Score = 37.5 bits (86), Expect = 4.5,   Method: Composition-based stats.
 Identities = 19/159 (11%), Positives = 58/159 (36%), Gaps = 25/159 (15%)

Query: 231 TASGTKMGKTLSGAIWLNKEMTSPYN---FWQYWRNIDDADVVSFAKRLTTLPMSEIDRM 287
           T +  KM K+L    +L K++   Y+      +  ++   + + +++      + E ++ 
Sbjct: 269 TINSEKMSKSL-NNFFLAKDVLKEYSGDALRYFLLSVQYRNPLDYSRD----RLDEAEKN 323

Query: 288 AKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQ-HMPTISISKDEV 346
            +     I   K++ A E           EKAA  +++ F  ++    +    + +  ++
Sbjct: 324 MERLSGVIRRLKELAAKEGAEKTDASRSLEKAAEESLKAFHEAMDDDFNTGLATGAMFDL 383

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIIS 385
           ++ + +    V                   + +++  + 
Sbjct: 384 AKAINIYGTAVD----------------GGLSVDHEAVE 406


>gi|241759469|ref|ZP_04757573.1| conserved hypothetical protein [Neisseria flavescens SK114]
 gi|261364154|ref|ZP_05977037.1| S4 RNA-binding domain protein [Neisseria mucosa ATCC 25996]
 gi|319639428|ref|ZP_07994178.1| S4 RNA-binding domain-containing protein [Neisseria mucosa C102]
 gi|241320251|gb|EER56584.1| conserved hypothetical protein [Neisseria flavescens SK114]
 gi|288567748|gb|EFC89308.1| S4 RNA-binding domain protein [Neisseria mucosa ATCC 25996]
 gi|317399323|gb|EFV79994.1| S4 RNA-binding domain-containing protein [Neisseria mucosa C102]
 gi|325131474|gb|EGC54181.1| S4 RNA-binding domain protein [Neisseria meningitidis M6190]
 gi|325197671|gb|ADY93127.1| S4 RNA-binding domain protein [Neisseria meningitidis G2136]
          Length = 77

 Score = 37.5 bits (86), Expect = 4.5,   Method: Composition-based stats.
 Identities = 10/53 (18%), Positives = 22/53 (41%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
           E +  + L  L+  AG A S  +A+  +    +  N    + +  +I+  +  
Sbjct: 8   EDNEYIALCDLLKLAGLAESGGQAKAFIAEGLVLRNGETETRKTAKIRGGEVI 60


>gi|91776879|ref|YP_546635.1| pseudouridine synthase, Rsu [Methylobacillus flagellatus KT]
 gi|91710866|gb|ABE50794.1| Pseudouridine synthase, Rsu [Methylobacillus flagellatus KT]
          Length = 380

 Score = 37.5 bits (86), Expect = 4.5,   Method: Composition-based stats.
 Identities = 7/56 (12%), Positives = 20/56 (35%), Gaps = 9/56 (16%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIIS--------NEKLQIKLQDFDSTGNIK 403
           + + G   S  EA   + +  +K+N  ++         + K+++  +         
Sbjct: 147 MAELGLC-SRREADEFIANGWVKVNGEVVDVLGTRVAPDAKIEVSKEAHQHQAETV 201


>gi|78222432|ref|YP_384179.1| ribosomal large subunit pseudouridine synthase B [Geobacter
           metallireducens GS-15]
 gi|78193687|gb|ABB31454.1| ribosomal large subunit pseudouridine synthase B [Geobacter
           metallireducens GS-15]
          Length = 258

 Score = 37.5 bits (86), Expect = 4.5,   Method: Composition-based stats.
 Identities = 9/33 (27%), Positives = 16/33 (48%), Gaps = 1/33 (3%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSII 384
           L  ++ +AG A S  EA R +    + +N   +
Sbjct: 5   LQKILSQAGIA-SRREAERMITDGRVAVNGKPV 36


>gi|85713166|ref|ZP_01044198.1| 30S ribosomal protein S4 [Idiomarina baltica OS145]
 gi|85693036|gb|EAQ31002.1| 30S ribosomal protein S4 [Idiomarina baltica OS145]
          Length = 206

 Score = 37.5 bits (86), Expect = 4.5,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 29/63 (46%), Gaps = 8/63 (12%)

Query: 347 SRGMGLLTLIVK--------AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
           + G  LL L+ +         GFA++  EAR+ +   A+ +N  +++     ++ +D  S
Sbjct: 85  NTGENLLQLLEQRLDNVVYRMGFASTRAEARQLVSHKAVVVNGQVVNIPSFMVRPEDVVS 144

Query: 399 TGN 401
              
Sbjct: 145 VRE 147


>gi|320547702|ref|ZP_08041987.1| tryptophan--tRNA ligase [Streptococcus equinus ATCC 9812]
 gi|320447777|gb|EFW88535.1| tryptophan--tRNA ligase [Streptococcus equinus ATCC 9812]
          Length = 340

 Score = 37.5 bits (86), Expect = 4.5,   Method: Composition-based stats.
 Identities = 38/225 (16%), Positives = 68/225 (30%), Gaps = 32/225 (14%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKT--GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +    L +    +     +    ++               S+ I+E
Sbjct: 12  PTGK-LHLGHYVGSLKNRVLLQNEDKYDMFVFLADQQALTDHAK---------ESEIIRE 61

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
           ++  +  +    +     K+   + +    L  +    +     S    N  +  E  + 
Sbjct: 62  SVGNV-ALDYLSVGLDPAKSTIFIQSQIPELAELTMYYMNLVSLSRLERNPTVKTEIAQK 120

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP-K 220
                    FL   Y I QA D      NY   + +G +DQ   I    ++        K
Sbjct: 121 GFGSSIPTGFL--VYPISQAADITAFKANY---VPVG-NDQKPMIEQTREIVRSFNHTYK 174

Query: 221 LFALTSP-----------LLTTASGT-KMGKTLSGAIWLNKEMTS 253
              L  P            L    G  KM K+L   I+L+ +  +
Sbjct: 175 TDVLVEPEGIFPENEAAGRLPGLDGNAKMSKSLGNGIYLSDDADT 219


>gi|315179378|gb|ADT86292.1| pseudouridine synthase family 1 protein [Vibrio furnissii NCTC
           11218]
          Length = 347

 Score = 37.5 bits (86), Expect = 4.5,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 17/41 (41%), Gaps = 7/41 (17%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNS------IISNEKLQ 390
           I + GF  S  EA + ++   + IN         +S++   
Sbjct: 13  ISETGFC-SRREADKLIEQGRVTINGQLPEMGTKVSDDDEV 52


>gi|282858349|ref|ZP_06267529.1| ribosomal protein S4 [Prevotella bivia JCVIHMP010]
 gi|282588797|gb|EFB93922.1| ribosomal protein S4 [Prevotella bivia JCVIHMP010]
          Length = 201

 Score = 37.5 bits (86), Expect = 4.5,   Method: Composition-based stats.
 Identities = 11/82 (13%), Positives = 28/82 (34%), Gaps = 3/82 (3%)

Query: 320 ATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKI 379
                  F+ +  S  + T  +    +   +    ++ + G A +   AR+ +    I +
Sbjct: 65  ERQFRNLFEKAAKSSGI-TGEVLLQSLEARLD--NVVFRLGIAPTRAAARQLVGHKHITV 121

Query: 380 NNSIISNEKLQIKLQDFDSTGN 401
           N  +++     +K  D      
Sbjct: 122 NGDVVNIASYNVKAGDVVGVRE 143


>gi|323342117|ref|ZP_08082350.1| pseudouridylate synthase [Erysipelothrix rhusiopathiae ATCC 19414]
 gi|322464542|gb|EFY09735.1| pseudouridylate synthase [Erysipelothrix rhusiopathiae ATCC 19414]
          Length = 246

 Score = 37.5 bits (86), Expect = 4.5,   Method: Composition-based stats.
 Identities = 13/69 (18%), Positives = 30/69 (43%), Gaps = 2/69 (2%)

Query: 348 RGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF- 406
             + L   I  +G+  S  +A   +    +K+N   ++ + L++  +D      I ++  
Sbjct: 5   NNIRLQKFIAMSGYC-SRRKAEVLINEGKVKVNGIKVTEQGLKVSTEDRVMVNGILINVE 63

Query: 407 GKKNHIICH 415
            KK + I +
Sbjct: 64  EKKVYYILN 72


>gi|168179019|ref|ZP_02613683.1| tryptophanyl-tRNA synthetase [Clostridium botulinum NCTC 2916]
 gi|226950757|ref|YP_002805848.1| tryptophanyl-tRNA synthetase [Clostridium botulinum A2 str. Kyoto]
 gi|182670209|gb|EDT82185.1| tryptophanyl-tRNA synthetase [Clostridium botulinum NCTC 2916]
 gi|226841345|gb|ACO84011.1| tryptophan--tRNA ligase [Clostridium botulinum A2 str. Kyoto]
          Length = 332

 Score = 37.5 bits (86), Expect = 4.5,   Method: Composition-based stats.
 Identities = 39/186 (20%), Positives = 66/186 (35%), Gaps = 40/186 (21%)

Query: 152 RMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGID 211
           RM  ++    R    +S+S     Y +L A D +     Y+  L   G DQ  ++    D
Sbjct: 108 RMTQYKDKSQRY--GESVSAGLLTYPVLMAADILL----YNTDLVPVGKDQKQHLEITRD 161

Query: 212 LGERLKT--PKLFALTSPLLTTASG---------TKMGKTLSG---AIWLNKEMTSPYNF 257
           L +R        F +  P +  A            KM K+       I +   M  P   
Sbjct: 162 LAQRFNNLYSPTFKIPEPYIPEAGAKIMDLQDPTKKMSKSSDNENSYILI---MDPPDAI 218

Query: 258 WQYW-RNIDDAD-VVSF-------------AKRLTTLPMSEIDRMAKLQGKEINEAKKII 302
            +   R + D+  +V +                +T + M EI++  K +GK   + K  +
Sbjct: 219 RRKINRCVTDSLGIVKYTDEQPGIKNLMTILSTITGMTMEEIEK--KYEGKGYAQFKNDV 276

Query: 303 ATEITT 308
           A  I +
Sbjct: 277 AEAIIS 282


>gi|114776536|ref|ZP_01451581.1| hypothetical protein SPV1_02412 [Mariprofundus ferrooxydans PV-1]
 gi|114553366|gb|EAU55764.1| hypothetical protein SPV1_02412 [Mariprofundus ferrooxydans PV-1]
          Length = 74

 Score = 37.5 bits (86), Expect = 4.5,   Method: Composition-based stats.
 Identities = 10/50 (20%), Positives = 23/50 (46%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
              + L  L+     A+S  EA+  +    +K+N  + + ++ +I + D 
Sbjct: 8   EEPIELYKLLKFENLASSGGEAKHVIAEGLVKLNGRLETQKRKKIVVGDI 57


>gi|147919300|ref|YP_686964.1| 30S ribosomal protein S4P [uncultured methanogenic archaeon RC-I]
 gi|121685291|sp|Q0W1V5|RS4_UNCMA RecName: Full=30S ribosomal protein S4P
 gi|110622360|emb|CAJ37638.1| 30S ribosomal protein S4P [uncultured methanogenic archaeon RC-I]
          Length = 205

 Score = 37.5 bits (86), Expect = 4.5,   Method: Composition-based stats.
 Identities = 17/89 (19%), Positives = 31/89 (34%), Gaps = 2/89 (2%)

Query: 317 EKAATAAMECFDMSIHSQHMPTISISKDEVSRGM--GLLTLIVKAGFATSTNEARRHLKS 374
             A     +   + I  +      +   +V   M   L T+I + GFA S  +AR+ +  
Sbjct: 75  RDAQNIVKKLQTLGILKEDAKLEDVLALKVDDIMERRLQTIIYRKGFANSIKQARQFIVH 134

Query: 375 NAIKINNSIISNEKLQIKLQDFDSTGNIK 403
             I +N   I+     +   + D      
Sbjct: 135 GHISLNGRKITVPGYLVLKSEEDMLSYYV 163


>gi|330447632|ref|ZP_08311280.1| tryptophanyl-tRNA synthetase [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
 gi|328491823|dbj|GAA05777.1| tryptophanyl-tRNA synthetase [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
          Length = 338

 Score = 37.5 bits (86), Expect = 4.6,   Method: Composition-based stats.
 Identities = 35/220 (15%), Positives = 71/220 (32%), Gaps = 35/220 (15%)

Query: 45  TASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMR-SQEIQENI 103
           T   LH GH    +      +  ++   L+     +       D      + +  I   +
Sbjct: 18  TGP-LHLGHYVGSLQQRIQLQHQYQQTILVADMQGL------TDNGHNPQKVASNILNVV 70

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL 163
                +           T   + ++   L  +          +  S++R+    +V++ +
Sbjct: 71  ADYLAVG-----IDPNLTTICLQSSLPALAELTMY-----YSNLVSISRLERNPTVKNEI 120

Query: 164 KR---EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT-- 218
           +     +S+      Y I QA D      N    L   G DQ   +    ++  ++    
Sbjct: 121 QSKAFGRSIPAGFLTYPISQAADITAFKAN----LIPVGDDQLPMLEQTNEIVRKINHIA 176

Query: 219 -----PKLFALTSPL--LTTASGT-KMGKTLSGAIWLNKE 250
                 +  AL S +  L +  G  KM K++  AI L  +
Sbjct: 177 GKEILVECQALLSNVARLPSTDGKNKMSKSMGNAITLGAD 216


>gi|157736588|ref|YP_001489271.1| tryptophanyl-tRNA synthetase [Arcobacter butzleri RM4018]
 gi|157698442|gb|ABV66602.1| tryptophanyl-tRNA synthetase [Arcobacter butzleri RM4018]
          Length = 321

 Score = 37.5 bits (86), Expect = 4.6,   Method: Composition-based stats.
 Identities = 17/82 (20%), Positives = 30/82 (36%), Gaps = 14/82 (17%)

Query: 174 FNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK---TPKLFAL------ 224
           F+Y +L A D +     +D  +   G DQ  ++    D+          ++F L      
Sbjct: 122 FSYPVLMAADILL----FDSNIVPVGKDQIQHVEMTRDIATSFNHAYGKEIFILPEAKVD 177

Query: 225 -TSPLLTTASGTKMGKTLSGAI 245
                +    G KM K+ +  I
Sbjct: 178 EIVATVPGTDGAKMSKSYNNTI 199


>gi|315453415|ref|YP_004073685.1| tryptophanyl-tRNA synthetase [Helicobacter felis ATCC 49179]
 gi|315132467|emb|CBY83095.1| tryptophanyl-tRNA synthetase [Helicobacter felis ATCC 49179]
          Length = 326

 Score = 37.5 bits (86), Expect = 4.6,   Method: Composition-based stats.
 Identities = 35/227 (15%), Positives = 73/227 (32%), Gaps = 46/227 (20%)

Query: 37  TAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRS 96
             + G   T   +H G+    +  +   +  ++ I  +      +   +        +  
Sbjct: 4   RVFSGIQPTGG-IHLGNYLGAIKQWVEWQDRYESIFCV------VNAHAITTPKDPKILH 56

Query: 97  QEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIG-SFFSVNRMLS 155
           ++  +    +             K+   + +      ++ +   L   G S   ++RM  
Sbjct: 57  EQTLQMATLLLACG-----IDPKKSKLFIQSQVDLHGALCW---LLNCGVSMGDLSRMTQ 108

Query: 156 FESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER 215
           F+     LK +  L+ L FNY +L A D + L +     +   G DQ  ++    D+  R
Sbjct: 109 FKD--KSLKSKSPLAGL-FNYPVLMAADIL-LYQADCVPV---GEDQQQHLELTRDIAMR 161

Query: 216 LK-----------------TPKLFALTSPLLTTASGTKMGKTLSGAI 245
                                ++  L  PL       KM K+  G +
Sbjct: 162 FNKNFGTCFKIPKALIAPTGARVMGLDDPL------VKMSKSHPGNL 202


>gi|315107243|gb|EFT79219.1| S4 domain protein [Propionibacterium acnes HL030PA1]
 gi|327331109|gb|EGE72849.1| S4 domain protein [Propionibacterium acnes HL097PA1]
          Length = 71

 Score = 37.5 bits (86), Expect = 4.6,   Method: Composition-based stats.
 Identities = 9/46 (19%), Positives = 19/46 (41%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           + L   +  A  A +  +AR  + S  + +N  + +    Q+   D
Sbjct: 2   IRLGQYLKFANLAETGGQARELIASGMVSVNGKVETRRGRQLHPGD 47


>gi|297380433|gb|ADI35320.1| tryptophanyl-tRNA synthetase [Helicobacter pylori v225d]
          Length = 326

 Score = 37.5 bits (86), Expect = 4.6,   Method: Composition-based stats.
 Identities = 41/238 (17%), Positives = 79/238 (33%), Gaps = 40/238 (16%)

Query: 147 FFSVNRMLSFESVR-SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGN 205
             S+  M      +   LK  +S++   FNY IL A D +     Y   L   G DQ  +
Sbjct: 98  QVSMGEMQRMTQFKDKSLKNPKSVNVGLFNYPILMASDILL----YQSDLVPVGEDQKQH 153

Query: 206 IICGIDLGERLKT--PKLFALTSPLLTTASG---------TKMGKTLSG---AIWLNKEM 251
           +    ++ E+        F +  PL+               KM K+  G   AI+L   +
Sbjct: 154 LELTRNVAEKFNRDFGNCFKVPEPLIAKVGARVMGLDDPKVKMSKSHQGANHAIFL---L 210

Query: 252 TSPYNFWQYWRNIDDADV---------------VSFAKRLTTLPMSEIDRMAKLQGKEIN 296
             P    +  +      +               ++    L+      I+   K +G    
Sbjct: 211 DEPDIIVRKIKKAATDSMGVIAFDEKREGVFNLLNIYMLLSNESPESIEERFKNKG--YG 268

Query: 297 EAKKIIATEITTMVHG-REEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLL 353
           + KK +A  +   +   +E  ++ +   ++        +  P    +  +    MGL+
Sbjct: 269 DFKKELAEVVIQALKPIQERYKEISDDEVKAVLNGGVKKAKPLAQATYQKAKELMGLV 326


>gi|288918462|ref|ZP_06412813.1| pseudouridine synthase [Frankia sp. EUN1f]
 gi|288350102|gb|EFC84328.1| pseudouridine synthase [Frankia sp. EUN1f]
          Length = 308

 Score = 37.5 bits (86), Expect = 4.6,   Method: Composition-based stats.
 Identities = 5/48 (10%), Positives = 22/48 (45%), Gaps = 1/48 (2%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
           + G+ L  ++  AG   S   +   + +  ++++  ++  +  ++  +
Sbjct: 68  AEGIRLQKVLAAAGI-GSRRASEELIDAGRVRVDGEVVREQGRRVDPE 114


>gi|260767790|ref|ZP_05876725.1| ribosomal large subunit pseudouridine synthase F [Vibrio furnissii
           CIP 102972]
 gi|260617299|gb|EEX42483.1| ribosomal large subunit pseudouridine synthase F [Vibrio furnissii
           CIP 102972]
          Length = 347

 Score = 37.5 bits (86), Expect = 4.6,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 17/41 (41%), Gaps = 7/41 (17%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNS------IISNEKLQ 390
           I + GF  S  EA + ++   + IN         +S++   
Sbjct: 13  ISETGFC-SRREADKLIEQGRVTINGQLPEMGTKVSDDDEV 52


>gi|121702393|ref|XP_001269461.1| 30S ribosomal subunit  S4, putative [Aspergillus clavatus NRRL 1]
 gi|119397604|gb|EAW08035.1| 30S ribosomal subunit S4, putative [Aspergillus clavatus NRRL 1]
          Length = 464

 Score = 37.5 bits (86), Expect = 4.6,   Method: Composition-based stats.
 Identities = 12/60 (20%), Positives = 26/60 (43%), Gaps = 2/60 (3%)

Query: 337 PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
           P   ++   + R + +   I +A FA+S  +AR+ +   A+ +N   +      +   D 
Sbjct: 113 PFTQMTFAPLERRLDVA--IFRAMFASSARQARQFVVHGAVTVNGKKMRYPGYLLNPGDL 170


>gi|114705781|ref|ZP_01438684.1| High mobility group proteins HMG-I and HMG-Y:Pseudouridine
           synthase, Rsu:RNA-binding S4:Pseudouridine synthase
           [Fulvimarina pelagi HTCC2506]
 gi|114538627|gb|EAU41748.1| High mobility group proteins HMG-I and HMG-Y:Pseudouridine
           synthase, Rsu:RNA-binding S4:Pseudouridine synthase
           [Fulvimarina pelagi HTCC2506]
          Length = 639

 Score = 37.5 bits (86), Expect = 4.6,   Method: Composition-based stats.
 Identities = 17/66 (25%), Positives = 28/66 (42%), Gaps = 5/66 (7%)

Query: 343 KDEVSRG----MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
           +DE + G    M +   + +AG A S  +A   +    +K+N  II +  L +K  D   
Sbjct: 173 EDEAAAGQQADMRIARRLARAGIA-SRRDAEAMIVDGRVKVNGKIIDSPALDVKPTDRIE 231

Query: 399 TGNIKL 404
                L
Sbjct: 232 VDGALL 237


>gi|238751125|ref|ZP_04612620.1| Tryptophanyl-tRNA synthetase [Yersinia rohdei ATCC 43380]
 gi|238710603|gb|EEQ02826.1| Tryptophanyl-tRNA synthetase [Yersinia rohdei ATCC 43380]
          Length = 346

 Score = 37.5 bits (86), Expect = 4.6,   Method: Composition-based stats.
 Identities = 26/138 (18%), Positives = 52/138 (37%), Gaps = 21/138 (15%)

Query: 150 VNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICG 209
           ++RM  F+   +R     +     F+Y +L A D + L +     +   G DQ  ++   
Sbjct: 116 LSRMTQFKDKSARYAENINAGL--FDYPVLMAADIL-LYQTNQVPV---GEDQKQHLELS 169

Query: 210 IDLGERLKT--PKLFALTSPLLTTASG---------TKMGKTLSGAIWLNKEMTSPYNFW 258
            D+  R       +F +  P +  A            KM K+      + + +  P +  
Sbjct: 170 RDIAGRFNNLYGDIFKIPEPFIPKAGARVMSLQDPTKKMSKSDDNRSNVIELLEDPKSVV 229

Query: 259 QYW-RNIDDAD---VVSF 272
           +   R + D+D   V+ +
Sbjct: 230 KKIKRAMTDSDEPAVIRY 247


>gi|224437054|ref|ZP_03658035.1| isoleucyl-tRNA synthetase [Helicobacter cinaedi CCUG 18818]
 gi|313143526|ref|ZP_07805719.1| isoleucyl-tRNA synthetase [Helicobacter cinaedi CCUG 18818]
 gi|313128557|gb|EFR46174.1| isoleucyl-tRNA synthetase [Helicobacter cinaedi CCUG 18818]
          Length = 935

 Score = 37.5 bits (86), Expect = 4.6,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 61/187 (32%), Gaps = 44/187 (23%)

Query: 75  GGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGI-----FSSFIKYGTGKTDALMLNNE 129
            G    I     +D +  ++  + ++   E  +       +S  IK    ++   +  N 
Sbjct: 472 WGVP--IAFLVDKDTNAPLLDIEVLEFMAEIFEKQGCDAWWSYEIKDLLPQSHKHLAQNL 529

Query: 130 TWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAK 189
           +   S   +D+  + GS +S                    + L+ NY    AYD    A 
Sbjct: 530 S--KSKHILDVWFDSGSTWS--------------------AVLKNNYQTKNAYD----AG 563

Query: 190 NYDCRLQMGGSDQ---WGN----IICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
            +   + + GSDQ   W      + C +      K       T       +G KM K+  
Sbjct: 564 EHPADMYLEGSDQHRGWFQSSLLLSCAVSKIAPYKQILTHGFTF----DRNGEKMSKSKG 619

Query: 243 GAIWLNK 249
             I  ++
Sbjct: 620 NVIAPSE 626


>gi|222480229|ref|YP_002566466.1| ribosomal protein S4 [Halorubrum lacusprofundi ATCC 49239]
 gi|222453131|gb|ACM57396.1| ribosomal protein S4 [Halorubrum lacusprofundi ATCC 49239]
          Length = 175

 Score = 37.5 bits (86), Expect = 4.6,   Method: Composition-based stats.
 Identities = 26/166 (15%), Positives = 60/166 (36%), Gaps = 27/166 (16%)

Query: 238 GKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE 297
           GK   G         +P + +Q  R  +++D++S           E  R          E
Sbjct: 4   GKNTKGY-------ETPNHPYQGERIAEESDLLSRYGL---KNKEEFWRAQSELRSMRRE 53

Query: 298 AKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLI- 356
           A++++           + A++A    +              IS         + +  L+ 
Sbjct: 54  ARRLLGEAQG----DVDVAQEAGAEFVARLRRIGILGDNDDISAVLS-----LDVTDLLE 104

Query: 357 --VKA-----GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
             ++      GFA+ST +AR+ +    I ++ + ++   +++ + D
Sbjct: 105 RRLQTVAYRQGFASSTQQARQFIVHGHITVDGARVTRPSVKVDVDD 150


>gi|255021576|ref|ZP_05293619.1| Tryptophanyl-tRNA synthetase [Acidithiobacillus caldus ATCC 51756]
 gi|254968964|gb|EET26483.1| Tryptophanyl-tRNA synthetase [Acidithiobacillus caldus ATCC 51756]
          Length = 404

 Score = 37.1 bits (85), Expect = 4.7,   Method: Composition-based stats.
 Identities = 9/37 (24%), Positives = 15/37 (40%), Gaps = 3/37 (8%)

Query: 229 LTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNID 265
           +    G KM K+    I L ++   P +  Q  R + 
Sbjct: 257 MPGLDGQKMSKSYGNTIALRED---PDSVRQKLRTMP 290


>gi|281420178|ref|ZP_06251177.1| ribosomal large subunit pseudouridine synthase D [Prevotella copri
           DSM 18205]
 gi|281405673|gb|EFB36353.1| ribosomal large subunit pseudouridine synthase D [Prevotella copri
           DSM 18205]
          Length = 315

 Score = 37.1 bits (85), Expect = 4.7,   Method: Composition-based stats.
 Identities = 14/71 (19%), Positives = 28/71 (39%), Gaps = 5/71 (7%)

Query: 340 SISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDST 399
                +V +   LL  +++     S  + ++ L+   IK+N   I+     +K       
Sbjct: 25  EYEHYKVEKPAPLLEWLMENVKGPSKTKVKQTLQGRGIKVNGKTITQFDYALKP-----G 79

Query: 400 GNIKLSFGKKN 410
             + +S  KKN
Sbjct: 80  MKVSVSKTKKN 90


>gi|222447087|pdb|3FHJ|A Chain A, Independent Saturation Of Three Trprs Subsites Generates A
           Partially-Assembled State Similar To Those Observed In
           Molecular Simulations
          Length = 300

 Score = 37.1 bits (85), Expect = 4.7,   Method: Composition-based stats.
 Identities = 41/227 (18%), Positives = 68/227 (29%), Gaps = 39/227 (17%)

Query: 143 EIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQ 202
           E+ +      ML        L+R   +S     Y  L A D +     Y+  +   G DQ
Sbjct: 77  EVPAHAQAAWMLQCIVYIGELERMTQVSAGLLTYPPLMAADILL----YNTDIVPVGEDQ 132

Query: 203 WGNIICGIDLGERLKT----------PKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMT 252
             +I    DL ER             PK+ A    L+      KM K+          + 
Sbjct: 133 KQHIELTRDLAERFNKRYFTIPEARIPKVGARIMSLVDPT--KKMSKSDPNPKAYITLLD 190

Query: 253 SPYNFWQYWRNIDDAD----VVSFAKRLTTLPMSEIDRMAKL-QGKEINEAKKIIATEIT 307
                 +  ++ +       + +     +TL    I+ + +  +GK     K  +A  + 
Sbjct: 191 DAKTIEKKIKSSEGTIRYPGISNLLNIYSTLSGQSIEELERQYEGKGYGVFKADLAQVVI 250

Query: 308 -------TMVHG-----------REEAEKAATAAMECFDMSIHSQHM 336
                     H             E AEKA   A E       +  +
Sbjct: 251 ETLRPIQERYHHWMESEELDRVLDEGAEKANRVASEMVRKMEQAMGL 297


>gi|153937935|ref|YP_001392762.1| 30S ribosomal protein S4 [Clostridium botulinum F str. Langeland]
 gi|171769264|sp|A7GJ02|RS4B_CLOBL RecName: Full=30S ribosomal protein S4 B
 gi|152933831|gb|ABS39329.1| 30S ribosomal protein S4 [Clostridium botulinum F str. Langeland]
 gi|295320741|gb|ADG01119.1| 30S ribosomal protein S4 [Clostridium botulinum F str. 230613]
          Length = 197

 Score = 37.1 bits (85), Expect = 4.7,   Method: Composition-based stats.
 Identities = 11/38 (28%), Positives = 19/38 (50%)

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
           GFA S  +AR+ +    I +N S ++    ++K  D  
Sbjct: 98  GFANSIRQARQMVNHGHILVNGSKVNIPSYEVKAGDVI 135


>gi|153010359|ref|YP_001371573.1| RNA-binding S4 domain-containing protein [Ochrobactrum anthropi
           ATCC 49188]
 gi|151562247|gb|ABS15744.1| RNA-binding S4 domain protein [Ochrobactrum anthropi ATCC 49188]
          Length = 576

 Score = 37.1 bits (85), Expect = 4.7,   Method: Composition-based stats.
 Identities = 11/56 (19%), Positives = 25/56 (44%), Gaps = 1/56 (1%)

Query: 342 SKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
           ++ +   G  +   + +AG A S  EA   + +  I +N  ++ +  + +K  D  
Sbjct: 50  AEGQEDTGERIAKRLARAGIA-SRREAETMIAAGRIAVNGKVLESPAVNVKRTDII 104


>gi|13357733|ref|NP_078007.1| tryptophanyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           700970]
 gi|170761935|ref|YP_001752257.1| tryptophanyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           27815]
 gi|183508730|ref|ZP_02689943.2| tryptophanyl-tRNA synthetase [Ureaplasma parvum serovar 14 str.
           ATCC 33697]
 gi|186701945|ref|ZP_02554383.2| tryptophanyl-tRNA synthetase [Ureaplasma parvum serovar 6 str. ATCC
           27818]
 gi|25009453|sp|Q9PQW8|SYW_UREPA RecName: Full=Tryptophanyl-tRNA synthetase; AltName:
           Full=Tryptophan--tRNA ligase; Short=TrpRS
 gi|11271080|pir||B82924 tryptophanyl-tRNA synthetase UU175 [imported] - Ureaplasma
           urealyticum
 gi|6899138|gb|AAF30582.1|AE002117_6 tryptophanyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           700970]
 gi|168827512|gb|ACA32774.1| tryptophanyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           27815]
 gi|182675657|gb|EDT87562.1| tryptophanyl-tRNA synthetase [Ureaplasma parvum serovar 14 str.
           ATCC 33697]
 gi|186700697|gb|EDU18979.1| tryptophanyl-tRNA synthetase [Ureaplasma parvum serovar 6 str. ATCC
           27818]
          Length = 333

 Score = 37.1 bits (85), Expect = 4.7,   Method: Composition-based stats.
 Identities = 37/283 (13%), Positives = 84/283 (29%), Gaps = 48/283 (16%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   T + L  G+    +  F   +  ++    +    S+   P+  D +      ++I 
Sbjct: 7   GIQPTNN-LTLGNYLGAIKNFVDLQDDYEVFLFVADLHSLT--PNIFDNTDFSTTKRQI- 62

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLL---REIGSFFSVNRMLSFE 157
                I    ++ I          +      L       +L     IG    + +     
Sbjct: 63  -----IATYLAAGID----PKKTCLFYQSDILSIPLLAHILLCSTSIGELTRMTQFKDKS 113

Query: 158 SVRSRLKREQSLSFLEFN-YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL 216
              +++     +       Y  L A D +     ++  +   G DQ  ++     L +R 
Sbjct: 114 IKATKMANNTEMIPSGLLTYPTLMAADIL----TFNADVVPVGQDQKQHLELTRTLADRF 169

Query: 217 KT--------PKLFA--LTSPLLTTAS-GTKMGKTLSG---AIWLNKEMTSPYN------ 256
                     P+++   + + ++       KM K+       I+LN      +       
Sbjct: 170 NKRYGNTFKLPQVYIPKIGAKIMDLLDPNIKMSKSSKNLKGVIFLNDSKDIIFKKIKGAL 229

Query: 257 -------FWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG 292
                   +        +++++    LT L   EI+   + Q 
Sbjct: 230 TDNLNKVKYDLTLQPGVSNLMTIYACLTNLSFKEIELKYQQQN 272


>gi|88861470|ref|ZP_01136096.1| 30S ribosomal protein S4 [Pseudoalteromonas tunicata D2]
 gi|88816518|gb|EAR26347.1| 30S ribosomal protein S4 [Pseudoalteromonas tunicata D2]
          Length = 206

 Score = 37.1 bits (85), Expect = 4.7,   Method: Composition-based stats.
 Identities = 16/72 (22%), Positives = 32/72 (44%), Gaps = 14/72 (19%)

Query: 347 SRGMGLLTLIVK--------AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
           + G  LL L+ +         GFA++  EAR+ +   ++ +N S+++    +I   D   
Sbjct: 85  NTGENLLQLLEQRLDNVVYRMGFASTRAEARQLVSHKSVMVNGSVVNIPSYRITADD--- 141

Query: 399 TGNIKLS-FGKK 409
              + +    KK
Sbjct: 142 --VVVIREKAKK 151


>gi|119384066|ref|YP_915122.1| lysyl-tRNA synthetase [Paracoccus denitrificans PD1222]
 gi|119384316|ref|YP_915372.1| lysyl-tRNA synthetase [Paracoccus denitrificans PD1222]
 gi|119373833|gb|ABL69426.1| lysyl-tRNA synthetase [Paracoccus denitrificans PD1222]
 gi|119374083|gb|ABL69676.1| lysyl-tRNA synthetase [Paracoccus denitrificans PD1222]
          Length = 530

 Score = 37.1 bits (85), Expect = 4.7,   Method: Composition-based stats.
 Identities = 16/85 (18%), Positives = 26/85 (30%), Gaps = 6/85 (7%)

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            DF       D   +M G D   N      +   L        T  L     G K+ K+ 
Sbjct: 236 PDFGARWAALDVDFEMYGKDHSTNTPIYDGICRILGGRAPEHFTYELFLDQHGQKISKSK 295

Query: 242 SGAIWLNKEMT------SPYNFWQY 260
              + +++ +T        Y  +Q 
Sbjct: 296 GNGLSIDEWLTYAATESLSYFMFQK 320


>gi|332674056|gb|AEE70873.1| tryptophan--tRNA ligase [Helicobacter pylori 83]
          Length = 326

 Score = 37.1 bits (85), Expect = 4.7,   Method: Composition-based stats.
 Identities = 42/235 (17%), Positives = 78/235 (33%), Gaps = 34/235 (14%)

Query: 147 FFSVNRMLSFESVR-SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGN 205
             S+  M      +   LK  +S++   FNY IL A D +     Y   L   G DQ  +
Sbjct: 98  QVSMGEMQRMTQFKDKSLKNPKSVNVGLFNYPILMASDILL----YQSDLVPVGEDQKQH 153

Query: 206 IICGIDLGERLKT--PKLFALTSPLLTTASG---------TKMGKTLSG---AIWLNKEM 251
           +    ++ E+        F +  PL+               KM K+  G   AI+L  E 
Sbjct: 154 LELTRNIAEKFNRDFGSCFKVPEPLIAKVGARVMGLDDPKVKMSKSHQGANHAIFLLDEP 213

Query: 252 TSPYNFWQYWRNID------DAD------VVSFAKRLTTLPMSEIDRMAKLQGKEINEAK 299
                  +            D        +++    L+      I+   K +G    + K
Sbjct: 214 DIIVRKIKKAATDSTGVIAFDEKREGVFNLLNIYMLLSNESPENIEERFKNKG--YGDFK 271

Query: 300 KIIATEITTMVHG-REEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLL 353
           K +A  +   +   +E  ++ +   ++        +  P    +  +    MGL+
Sbjct: 272 KELAEVVIQALKPIQERYKEISDDEVKAVLNGGVKKARPLAQATYQKAKELMGLV 326


>gi|331268720|ref|YP_004395212.1| leucyl-tRNA synthetase [Clostridium botulinum BKT015925]
 gi|329125270|gb|AEB75215.1| leucyl-tRNA synthetase [Clostridium botulinum BKT015925]
          Length = 812

 Score = 37.1 bits (85), Expect = 4.7,   Method: Composition-based stats.
 Identities = 13/83 (15%), Positives = 30/83 (36%), Gaps = 16/83 (19%)

Query: 228 LLTTASGTKMGKTLSGAIWLNK-------EMTSPYNFWQYWRN----IDDADVVSFAKRL 276
           L+    G KM K+    I  +        ++   Y  + +  +      D  + S  +  
Sbjct: 564 LILGPDGLKMSKSKGNTIAPDDYIKEFGADVFRMYLMFGFAYSEGGAWSDDAIKSMGRF- 622

Query: 277 TTLPMSEIDRMAKLQGKEINEAK 299
               + +++R+      E+N +K
Sbjct: 623 ----IDKVERLLDDARTELNNSK 641


>gi|323135948|ref|ZP_08071031.1| lysyl-tRNA synthetase [Methylocystis sp. ATCC 49242]
 gi|322399039|gb|EFY01558.1| lysyl-tRNA synthetase [Methylocystis sp. ATCC 49242]
          Length = 561

 Score = 37.1 bits (85), Expect = 4.7,   Method: Composition-based stats.
 Identities = 24/145 (16%), Positives = 37/145 (25%), Gaps = 14/145 (9%)

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            D+           +M G D   ++     +   L           L     G K+ K+ 
Sbjct: 244 PDWAMRWYALGVDYEMAGKDLIDSVKLSGAIVRALGGRAPEGFNYELFLDEKGQKISKSK 303

Query: 242 SGAI----WLNKEMTSPYNFWQYWRNIDDADVVSFA--------KRLTTLPMSEIDRMAK 289
              +    WL     SP +  Q+      A    +           LT L          
Sbjct: 304 GNGLTIEEWLT--YASPESLAQFMFQKPTAAKRLYFDVIPRAVDDYLTFLDAYPRQDWKN 361

Query: 290 LQGKEINEAKKIIATEITTMVHGRE 314
             G  +         E  T+VH  E
Sbjct: 362 RLGNPVWHIHAGNPPEAETLVHAGE 386


>gi|304439715|ref|ZP_07399614.1| 30S ribosomal protein S4 [Peptoniphilus duerdenii ATCC BAA-1640]
 gi|304371790|gb|EFM25397.1| 30S ribosomal protein S4 [Peptoniphilus duerdenii ATCC BAA-1640]
          Length = 203

 Score = 37.1 bits (85), Expect = 4.7,   Method: Composition-based stats.
 Identities = 15/79 (18%), Positives = 29/79 (36%), Gaps = 3/79 (3%)

Query: 320 ATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKI 379
               +  F     ++  P  + +       M L  L  + GFA S  +AR+ +    + +
Sbjct: 66  EKQFVNLFKE---AKKAPEQTGTALVQFLEMRLDNLAYRMGFANSIRQARQLVSHGHVHV 122

Query: 380 NNSIISNEKLQIKLQDFDS 398
           N   ++    + K  D  S
Sbjct: 123 NGKKLNIPSYRCKPGDVIS 141


>gi|312113887|ref|YP_004011483.1| lysyl-tRNA synthetase [Rhodomicrobium vannielii ATCC 17100]
 gi|311219016|gb|ADP70384.1| lysyl-tRNA synthetase [Rhodomicrobium vannielii ATCC 17100]
          Length = 529

 Score = 37.1 bits (85), Expect = 4.7,   Method: Composition-based stats.
 Identities = 16/85 (18%), Positives = 24/85 (28%), Gaps = 8/85 (9%)

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           D+           +M G D   ++     +   L           L     G K+ K+  
Sbjct: 241 DWAMRWVALGVDYEMAGKDLIDSVTLSSKVARALGGRPPEGFNYELFLDDQGQKISKSKG 300

Query: 243 GAI----WL---NKEMTSPYNFWQY 260
             I    WL     E  S Y  +Q 
Sbjct: 301 NGIAVEEWLAYATPESLSLY-MFQK 324


>gi|190893875|ref|YP_001980417.1| heat shock protein (ribosome-associated) [Rhizobium etli CIAT 652]
 gi|218507914|ref|ZP_03505792.1| putative heat shock protein (ribosome-associated) [Rhizobium etli
           Brasil 5]
 gi|190699154|gb|ACE93239.1| putative heat shock protein (ribosome-associated) [Rhizobium etli
           CIAT 652]
          Length = 134

 Score = 37.1 bits (85), Expect = 4.7,   Method: Composition-based stats.
 Identities = 14/71 (19%), Positives = 24/71 (33%), Gaps = 12/71 (16%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF----DSTGNIKLSFG 407
           +   +       S + A+ H++S  ++IN    S     +K  D         +I L   
Sbjct: 15  IDKWLFFTRMVKSRSLAQSHVQSGHVRINGERCSQPSQMVKPGDRIELTLERRDIVL--- 71

Query: 408 KKNHIICHLCG 418
                I  L G
Sbjct: 72  -----IVRLAG 77


>gi|163744644|ref|ZP_02152004.1| lysyl-tRNA synthetase [Oceanibulbus indolifex HEL-45]
 gi|161381462|gb|EDQ05871.1| lysyl-tRNA synthetase [Oceanibulbus indolifex HEL-45]
          Length = 526

 Score = 37.1 bits (85), Expect = 4.7,   Method: Composition-based stats.
 Identities = 24/135 (17%), Positives = 45/135 (33%), Gaps = 10/135 (7%)

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            DF       D   +M G +   N      + E L   K    +  L    +G K+ K+ 
Sbjct: 236 PDFGARWAALDVDFEMYGKEHATNTAIYDRICEILGGKKPEHFSYELFLDENGQKISKSS 295

Query: 242 SGAI----WLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE 297
              I    WL    T   +++ + +      +         +P +  +   +L+  E  +
Sbjct: 296 GNGISIDQWLTYASTESLSYFMFLKPKTAKRMH-----FDVIPKAVDEYHQQLRAYETQD 350

Query: 298 AKKIIATEITTMVHG 312
           AK  +       +HG
Sbjct: 351 AKGRL-NNPVWHIHG 364


>gi|156103361|ref|XP_001617373.1| hypothetical protein [Plasmodium vivax SaI-1]
 gi|148806247|gb|EDL47646.1| hypothetical protein, conserved [Plasmodium vivax]
          Length = 409

 Score = 37.1 bits (85), Expect = 4.7,   Method: Composition-based stats.
 Identities = 14/69 (20%), Positives = 31/69 (44%), Gaps = 5/69 (7%)

Query: 337 PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSII-SNEKLQIKLQD 395
           P++ + +  + R   +L+L       TS  +A+  +K+  +K+NN ++  N  + I    
Sbjct: 3   PSVQLKRSTLLRLSKILSLSA----VTSRGKAQELIKNGKVKVNNQVVRQNVAVDINSAI 58

Query: 396 FDSTGNIKL 404
                 I +
Sbjct: 59  ELEGKPILV 67


>gi|121634256|ref|YP_974501.1| hypothetical protein NMC0390 [Neisseria meningitidis FAM18]
 gi|225076961|ref|ZP_03720160.1| hypothetical protein NEIFLAOT_02013 [Neisseria flavescens
           NRL30031/H210]
 gi|284800142|ref|ZP_05985807.2| S4 RNA-binding domain protein [Neisseria subflava NJ9703]
 gi|120865962|emb|CAM09699.1| hypothetical protein NMC0390 [Neisseria meningitidis FAM18]
 gi|224951714|gb|EEG32923.1| hypothetical protein NEIFLAOT_02013 [Neisseria flavescens
           NRL30031/H210]
 gi|284795856|gb|EFC51203.1| S4 RNA-binding domain protein [Neisseria subflava NJ9703]
          Length = 78

 Score = 37.1 bits (85), Expect = 4.7,   Method: Composition-based stats.
 Identities = 10/53 (18%), Positives = 22/53 (41%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
           E +  + L  L+  AG A S  +A+  +    +  N    + +  +I+  +  
Sbjct: 9   EDNEYIALCDLLKLAGLAESGGQAKAFIAEGLVLRNGETETRKTAKIRGGEVI 61


>gi|15645867|ref|NP_208045.1| tryptophanyl-tRNA synthetase [Helicobacter pylori 26695]
 gi|2314417|gb|AAD08297.1| tryptophanyl-tRNA synthetase (trpS) [Helicobacter pylori 26695]
          Length = 339

 Score = 37.1 bits (85), Expect = 4.7,   Method: Composition-based stats.
 Identities = 36/188 (19%), Positives = 62/188 (32%), Gaps = 39/188 (20%)

Query: 147 FFSVNRMLSFESVR-SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGN 205
             S+  M      +   LK  +S++   FNY IL A D +     Y   L   G DQ  +
Sbjct: 111 QVSMGEMQRMTQFKDKSLKNPKSVNVGLFNYPILMASDILL----YQSDLVPVGEDQKQH 166

Query: 206 IICGIDLGERLKT--PKLFALTSPLLTTASG---------TKMGKTLSG---AIWLNKEM 251
           +    ++ E+        F +  PL+               KM K+  G   AI+L   +
Sbjct: 167 LELTRNIAEKFNRDFGNCFKVPEPLIAKVGARVMGLDDPKVKMSKSHQGANHAIFL---L 223

Query: 252 TSPYNFWQYWRNIDDADV---------------VSFAKRLTTLPMSEIDRMAKLQGKEIN 296
             P    +  +      +               ++    L+      I+   K +G    
Sbjct: 224 DEPDIIVKKIKKAATDSMGVIAFDEKREGIFNLLNIYMLLSNESPENIEERFKNKG--YG 281

Query: 297 EAKKIIAT 304
           + KK +A 
Sbjct: 282 DFKKELAE 289


>gi|308064032|gb|ADO05919.1| tryptophanyl-tRNA synthetase [Helicobacter pylori Sat464]
          Length = 326

 Score = 37.1 bits (85), Expect = 4.8,   Method: Composition-based stats.
 Identities = 42/238 (17%), Positives = 79/238 (33%), Gaps = 40/238 (16%)

Query: 147 FFSVNRMLSFESVR-SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGN 205
             S+  M      +   LK  +S++   FNY IL A D +     Y   L   G DQ  +
Sbjct: 98  QVSMGEMQRMTQFKDKSLKNPKSVNVGLFNYPILMASDILL----YQSDLVPVGEDQKQH 153

Query: 206 IICGIDLGERLKT--PKLFALTSPLLTTASG---------TKMGKTLSG---AIWLNKEM 251
           +    ++ E+        F +  PL+               KM K+  G   AI+L   +
Sbjct: 154 LELTRNIAEKFNRDFGSCFKVPEPLIAKVGARVMGLDDPKVKMSKSHQGANHAIFL---L 210

Query: 252 TSPYNFWQYWRNIDDADV---------------VSFAKRLTTLPMSEIDRMAKLQGKEIN 296
             P    +  +      V               ++    L+      I+   K +G    
Sbjct: 211 DEPDIIVRKIKKAATDSVGVIAFDEKREGVFNLLNIYMLLSNESPENIEERFKNKG--YG 268

Query: 297 EAKKIIATEITTMVHG-REEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLL 353
           + KK +A  +   +   +E  ++ +   ++        +  P    +  +    MGL+
Sbjct: 269 DFKKELAEVVIQALKPIQERYKEISDDEVKAVLNGGAKKAKPLAQATYQKAKELMGLV 326


>gi|229160237|ref|ZP_04288236.1| Tryptophanyl-tRNA synthetase [Bacillus cereus R309803]
 gi|228623198|gb|EEK80025.1| Tryptophanyl-tRNA synthetase [Bacillus cereus R309803]
          Length = 329

 Score = 37.1 bits (85), Expect = 4.8,   Method: Composition-based stats.
 Identities = 47/304 (15%), Positives = 92/304 (30%), Gaps = 64/304 (21%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   + + +  G+    M  F   +  H     +    + I  P    + R+ +RS    
Sbjct: 7   GIQPSGT-ITLGNYLGAMKQFTELQNEHDCYFCIVNQHA-ITVPQDPVQLRKNIRSLAAL 64

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLS-FESV 159
                I    ++          A +     W        +++ +     + RM    +  
Sbjct: 65  YVACGIDPEKATLFVQSEVPAHAQL----GW--------IMQSVAYVGELERMTQYKDKA 112

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-- 217
             R      L      Y  L A D +     Y+  +   G DQ  ++    DL ER    
Sbjct: 113 SGRDSVPAGL----LTYPPLMAADILL----YNTEIVPVGDDQKQHMELTRDLAERFNKR 164

Query: 218 ---------------TPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWR 262
                            ++ +LT P        KM K+      +   +  P    +  +
Sbjct: 165 FREVFTVPEIRIPKVGARVMSLTEPT------KKMSKSDPNPKAMISMLDEPKTIEKKIK 218

Query: 263 N-IDDAD-VVSFAKR--------------LTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           + + D++ +V F K                +   + EI+ M   +GK   + K  +A  +
Sbjct: 219 SAVTDSEGIVKFDKENKPGISNLLTIYSSFSGKTVEEIEAMY--EGKGYGDFKGDLAQVV 276

Query: 307 TTMV 310
              +
Sbjct: 277 VEAI 280


>gi|227524458|ref|ZP_03954507.1| pseudouridylate synthase [Lactobacillus hilgardii ATCC 8290]
 gi|227088377|gb|EEI23689.1| pseudouridylate synthase [Lactobacillus hilgardii ATCC 8290]
          Length = 241

 Score = 37.1 bits (85), Expect = 4.8,   Method: Composition-based stats.
 Identities = 9/55 (16%), Positives = 22/55 (40%), Gaps = 1/55 (1%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
           L  ++  AG   S  +A + +    +K+N  ++     ++   D      + +S 
Sbjct: 5   LQKVMAHAG-VASRRKAEKLIVEGHVKVNGKVVKELGTKVTESDEVEVDEVPISK 58


>gi|254503814|ref|ZP_05115965.1| lysyl-tRNA synthetase [Labrenzia alexandrii DFL-11]
 gi|222439885|gb|EEE46564.1| lysyl-tRNA synthetase [Labrenzia alexandrii DFL-11]
          Length = 552

 Score = 37.1 bits (85), Expect = 4.8,   Method: Composition-based stats.
 Identities = 15/83 (18%), Positives = 24/83 (28%), Gaps = 4/83 (4%)

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            DF       D   +M G D   N+     + + L           L     G K+ K+ 
Sbjct: 249 PDFGARWAALDVDFEMFGKDHGPNMAVYDKICKVLGGTPPEHYVYELFLDDKGEKISKSK 308

Query: 242 SGAI----WLNKEMTSPYNFWQY 260
              +    WL    T     + +
Sbjct: 309 GNGLSIDEWLTYAPTESLALYMF 331


>gi|168700528|ref|ZP_02732805.1| glutamate synthase (NADH) large subunit [Gemmata obscuriglobus UQM
           2246]
          Length = 1527

 Score = 37.1 bits (85), Expect = 4.8,   Method: Composition-based stats.
 Identities = 18/86 (20%), Positives = 32/86 (37%), Gaps = 7/86 (8%)

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISI-SKDEVSRGMGLLTLIVKAG 360
           +A  +  +    E A +A    +   D  + +  +P  S+ +   V+  +    L VK G
Sbjct: 607 LARAVDALCAEAEAAVRAGATILILSDRGVDAHKVPVPSLLATAAVNHHLIRAGLRVKCG 666

Query: 361 FATSTNEARR------HLKSNAIKIN 380
               T EAR        +   A  +N
Sbjct: 667 LVAETGEAREVHHLALLIGYGAAAVN 692


>gi|13476217|ref|NP_107787.1| hemolysin-like protein [Mesorhizobium loti MAFF303099]
 gi|14026977|dbj|BAB53573.1| hemolysin-like protein [Mesorhizobium loti MAFF303099]
          Length = 254

 Score = 37.1 bits (85), Expect = 4.8,   Method: Composition-based stats.
 Identities = 6/29 (20%), Positives = 14/29 (48%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNS 382
            L+V+ G   S + AR  ++   + ++  
Sbjct: 15  DLLVQRGLFASRSRARDAVERGTVTVDGV 43


>gi|327191765|gb|EGE58767.1| putative heat shock protein (ribosome-associated) [Rhizobium etli
           CNPAF512]
          Length = 134

 Score = 37.1 bits (85), Expect = 4.8,   Method: Composition-based stats.
 Identities = 14/71 (19%), Positives = 24/71 (33%), Gaps = 12/71 (16%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF----DSTGNIKLSFG 407
           +   +       S + A+ H++S  ++IN    S     +K  D         +I L   
Sbjct: 15  IDKWLFFTRMVKSRSLAQSHVQSGHVRINGERCSQPSQMVKPGDRIELTLERRDIVL--- 71

Query: 408 KKNHIICHLCG 418
                I  L G
Sbjct: 72  -----IVRLTG 77


>gi|320160440|ref|YP_004173664.1| 30S ribosomal protein S4 [Anaerolinea thermophila UNI-1]
 gi|319994293|dbj|BAJ63064.1| 30S ribosomal protein S4 [Anaerolinea thermophila UNI-1]
          Length = 212

 Score = 37.1 bits (85), Expect = 4.8,   Method: Composition-based stats.
 Identities = 19/99 (19%), Positives = 42/99 (42%), Gaps = 8/99 (8%)

Query: 303 ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFA 362
           A +    V+G  E           F +++  + +  +++ +   +  M L  ++ + GFA
Sbjct: 63  AKQKARRVYGIFE-----RQFRRYFGLALRKKGLTGLNLLQ---TLEMRLDNVVFRMGFA 114

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
           +S  +AR+ +    I++NN       + +K  D  S   
Sbjct: 115 SSRAQARQLVNHGHIQVNNHRADIPSMLVKPGDIISVKE 153


>gi|255505461|ref|ZP_05346261.3| ribosomal large subunit pseudouridine synthase F [Bryantella
           formatexigens DSM 14469]
 gi|255267773|gb|EET60978.1| ribosomal large subunit pseudouridine synthase F [Bryantella
           formatexigens DSM 14469]
          Length = 267

 Score = 37.1 bits (85), Expect = 4.8,   Method: Composition-based stats.
 Identities = 9/61 (14%), Positives = 23/61 (37%), Gaps = 1/61 (1%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           + +  + +   + +AG   S  EA R +    + ++ +     +  +  QD    G   +
Sbjct: 24  DTAEPVRINKYLAQAGIC-SRREADRLIAEGKVLVDGAAAVAGQKVLPSQDIRVEGEQAV 82

Query: 405 S 405
            
Sbjct: 83  R 83


>gi|20806545|ref|NP_621716.1| hypothetical protein TTE0003 [Thermoanaerobacter tengcongensis MB4]
 gi|20514982|gb|AAM23320.1| conserved hypothetical protein [Thermoanaerobacter tengcongensis
           MB4]
          Length = 68

 Score = 37.1 bits (85), Expect = 4.8,   Method: Composition-based stats.
 Identities = 12/71 (16%), Positives = 25/71 (35%), Gaps = 21/71 (29%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
           + L   +  A    +  +A+R ++   +K+N                     I+L  G+K
Sbjct: 11  ITLGQFLKYAKVCDTGGQAKRFIQEGKVKVNG-------------------VIELKRGRK 51

Query: 410 NHI--ICHLCG 418
            +   I  + G
Sbjct: 52  LYKNDIIEVEG 62


>gi|87119373|ref|ZP_01075271.1| leucyl-tRNA synthetase [Marinomonas sp. MED121]
 gi|86165764|gb|EAQ67031.1| leucyl-tRNA synthetase [Marinomonas sp. MED121]
          Length = 818

 Score = 37.1 bits (85), Expect = 4.8,   Method: Composition-based stats.
 Identities = 14/76 (18%), Positives = 22/76 (28%), Gaps = 11/76 (14%)

Query: 210 IDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADV 269
            D G          L +  +    GTKM K+    +        P    + +     AD 
Sbjct: 551 RDAGLVTSNEPFKRLLTQGMVNKDGTKMSKSKGNTV-------DPQEMIEKY----GADT 599

Query: 270 VSFAKRLTTLPMSEID 285
           V      T  P   ++
Sbjct: 600 VRLFIMFTAPPEQSLE 615


>gi|310815357|ref|YP_003963321.1| lysyl-tRNA synthetase [Ketogulonicigenium vulgare Y25]
 gi|308754092|gb|ADO42021.1| lysyl-tRNA synthetase [Ketogulonicigenium vulgare Y25]
          Length = 533

 Score = 37.1 bits (85), Expect = 4.8,   Method: Composition-based stats.
 Identities = 14/85 (16%), Positives = 24/85 (28%), Gaps = 6/85 (7%)

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            DF           +M G D   N      +   L        T  L     G K+ K+ 
Sbjct: 243 PDFGARWAALGVDFEMYGKDHATNTPIYDGICRTLGGRAPNHFTYELFLDELGQKISKSK 302

Query: 242 SGAIWLNK------EMTSPYNFWQY 260
              + +++        +  Y  +Q 
Sbjct: 303 GNGLTIDEWLHYASSESLSYFMYQK 327


>gi|307941492|ref|ZP_07656847.1| lysyl-tRNA synthetase [Roseibium sp. TrichSKD4]
 gi|307775100|gb|EFO34306.1| lysyl-tRNA synthetase [Roseibium sp. TrichSKD4]
          Length = 564

 Score = 37.1 bits (85), Expect = 4.8,   Method: Composition-based stats.
 Identities = 14/83 (16%), Positives = 23/83 (27%), Gaps = 4/83 (4%)

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            DF           +M G D   N+     + + L           L     G K+ K+ 
Sbjct: 261 PDFGARWAALGVDFEMFGKDHGPNMGLYDKICKVLGGKAPEHFVYELFLADDGAKISKSK 320

Query: 242 SGAI----WLNKEMTSPYNFWQY 260
              +    WL    T     + +
Sbjct: 321 GNGLTIDEWLTYAPTESLALYMF 343


>gi|149197232|ref|ZP_01874284.1| hypothetical protein LNTAR_12521 [Lentisphaera araneosa HTCC2155]
 gi|149139778|gb|EDM28179.1| hypothetical protein LNTAR_12521 [Lentisphaera araneosa HTCC2155]
          Length = 297

 Score = 37.1 bits (85), Expect = 4.8,   Method: Composition-based stats.
 Identities = 16/68 (23%), Positives = 27/68 (39%), Gaps = 3/68 (4%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
           M L   I  +GF  S  EA R ++   + IN         Q++ +DF      ++   K+
Sbjct: 1   MRLNKFISDSGFC-SRREADRLIEEGRVLINGRRCK-TGQQVEDKDFVEVDGQRIKA-KR 57

Query: 410 NHIICHLC 417
                +L 
Sbjct: 58  QKERVYLA 65


>gi|56460992|ref|YP_156273.1| 30S ribosomal protein S4 [Idiomarina loihiensis L2TR]
 gi|61215388|sp|Q5QXV7|RS4_IDILO RecName: Full=30S ribosomal protein S4
 gi|56180002|gb|AAV82724.1| Ribosomal protein S4 [Idiomarina loihiensis L2TR]
          Length = 206

 Score = 37.1 bits (85), Expect = 4.8,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 30/63 (47%), Gaps = 8/63 (12%)

Query: 347 SRGMGLLTLIVK--------AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
           + G  LL L+ +         GFA++  EAR+ +   A+ +N  +++    +++ +D  S
Sbjct: 85  NTGENLLQLLEQRLDNVVYRMGFASTRAEARQLVSHKAVVVNGQVVNIPSFKVRPEDVVS 144

Query: 399 TGN 401
              
Sbjct: 145 VRE 147


>gi|322412907|gb|EFY03815.1| tryptophanyl-tRNA synthetase II [Streptococcus dysgalactiae subsp.
           dysgalactiae ATCC 27957]
          Length = 340

 Score = 37.1 bits (85), Expect = 4.9,   Method: Composition-based stats.
 Identities = 32/225 (14%), Positives = 63/225 (28%), Gaps = 32/225 (14%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDE--SRRMMRSQEIQE 101
            T   LH GH    +    + +  +K    +      + D     +      +  + I  
Sbjct: 12  PTGK-LHLGHYVGSLKNRVMLQNENKYKMFI-----FLADQQALTDHAKESELIKESIGN 65

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
                  +          ++   + +    L  +    +     +    N  +  E  + 
Sbjct: 66  VALDYLSVG-----LDPKQSTIFIQSQIPELAELTMYYMNLVSLARLERNPTVKTEIAQK 120

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP-K 220
                    F  F Y + QA D      N+   + +G +DQ   I    ++         
Sbjct: 121 GFGESIPSGF--FVYPVSQAADITAFKANF---VPVG-NDQKPMIEQTREIVRSFNHTYH 174

Query: 221 LFALTSP-----------LLTTASGT-KMGKTLSGAIWLNKEMTS 253
              L  P            L    G  KM K+L   I+L+ +  +
Sbjct: 175 TECLVEPEGIYPENEKAGRLPGLDGNAKMSKSLGNGIYLSDDADT 219


>gi|228990262|ref|ZP_04150229.1| Tryptophanyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442]
 gi|228996359|ref|ZP_04156002.1| Tryptophanyl-tRNA synthetase [Bacillus mycoides Rock3-17]
 gi|229004022|ref|ZP_04161826.1| Tryptophanyl-tRNA synthetase [Bacillus mycoides Rock1-4]
 gi|228757236|gb|EEM06477.1| Tryptophanyl-tRNA synthetase [Bacillus mycoides Rock1-4]
 gi|228763398|gb|EEM12302.1| Tryptophanyl-tRNA synthetase [Bacillus mycoides Rock3-17]
 gi|228769429|gb|EEM18025.1| Tryptophanyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442]
          Length = 329

 Score = 37.1 bits (85), Expect = 4.9,   Method: Composition-based stats.
 Identities = 45/301 (14%), Positives = 92/301 (30%), Gaps = 58/301 (19%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   + + +  G+    M  F   +  H     +    + I  P    + R+ +RS    
Sbjct: 7   GIQPSGT-ITLGNYLGAMKQFTELQNEHDCYFCIVNQHA-ITVPQDSVQLRKNIRSLAAL 64

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
                I    S+          A +     W        +++ I     + RM      +
Sbjct: 65  YVACGIDPEKSTLFVQSEVPAHAQL----GW--------IMQSIAYVGELERMTQ---YK 109

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK--- 217
            +    +S+      Y  L A D +     Y+  +   G DQ  ++    DL ER     
Sbjct: 110 DKSSGRESVPAGLLTYPPLMAADILL----YNTEIVPVGDDQKQHMELTRDLAERFNKRF 165

Query: 218 --------------TPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
                           ++ +LT P        KM K+      +   +  P    +  ++
Sbjct: 166 REIFTIPEIRIPKVGARVMSLTEPT------KKMSKSDPNPKSMISMLDEPKTIEKKIKS 219

Query: 264 -IDDAD-VVSF-----------AKRLTTLPMSEIDRMAK-LQGKEINEAKKIIATEITTM 309
            + D+D +V +               ++     I+ +    +GK   + K  +A  +   
Sbjct: 220 AVTDSDGIVKYDKENKPGISNLLTIYSSFSGKTIEELEAYYEGKGYGDFKGDLAQVVVEA 279

Query: 310 V 310
           +
Sbjct: 280 I 280


>gi|229010571|ref|ZP_04167773.1| Tryptophanyl-tRNA synthetase [Bacillus mycoides DSM 2048]
 gi|229056915|ref|ZP_04196311.1| Tryptophanyl-tRNA synthetase [Bacillus cereus AH603]
 gi|228720443|gb|EEL72016.1| Tryptophanyl-tRNA synthetase [Bacillus cereus AH603]
 gi|228750769|gb|EEM00593.1| Tryptophanyl-tRNA synthetase [Bacillus mycoides DSM 2048]
          Length = 329

 Score = 37.1 bits (85), Expect = 4.9,   Method: Composition-based stats.
 Identities = 30/170 (17%), Positives = 56/170 (32%), Gaps = 45/170 (26%)

Query: 174 FNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK---------------- 217
             Y  L A D +     Y+  +   G DQ  ++    DL ER                  
Sbjct: 123 LTYPPLMAADILL----YNTEIVPVGDDQKQHMELTRDLAERFNKRFREVFTVPEIRIPK 178

Query: 218 -TPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRN-IDDAD-VVSFAK 274
              ++ +LT P        KM K+      +   +  P    +  ++ + D++ +V F K
Sbjct: 179 VGARVMSLTEPT------KKMSKSDPNPKAMISMLDEPKTIEKKIKSAVTDSEGIVKFDK 232

Query: 275 R--------------LTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMV 310
                           +   + EI+ M   +GK   + K  +A  +   +
Sbjct: 233 ENKPGISNLLTIYSSFSGKTVEEIEAMY--EGKGYGDFKGDLAQVVVEAI 280


>gi|229166121|ref|ZP_04293882.1| Tryptophanyl-tRNA synthetase [Bacillus cereus AH621]
 gi|228617343|gb|EEK74407.1| Tryptophanyl-tRNA synthetase [Bacillus cereus AH621]
          Length = 329

 Score = 37.1 bits (85), Expect = 4.9,   Method: Composition-based stats.
 Identities = 30/170 (17%), Positives = 56/170 (32%), Gaps = 45/170 (26%)

Query: 174 FNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK---------------- 217
             Y  L A D +     Y+  +   G DQ  ++    DL ER                  
Sbjct: 123 LTYPPLMAADILL----YNTEIVPVGDDQKQHMELTRDLAERFNKRFREVFTVPEIRIPK 178

Query: 218 -TPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRN-IDDAD-VVSFAK 274
              ++ +LT P        KM K+      +   +  P    +  ++ + D++ +V F K
Sbjct: 179 VGARVMSLTEPT------KKMSKSDPNPKAMISMLDEPKTIEKKIKSAVTDSEGIVKFDK 232

Query: 275 R--------------LTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMV 310
                           +   + EI+ M   +GK   + K  +A  +   +
Sbjct: 233 ENKPGISNLLTIYSSFSGKTVEEIEAMY--EGKGYGDFKGDLAQVVVEAI 280


>gi|225631056|ref|ZP_03787796.1| lysyl-tRNA synthetase [Wolbachia endosymbiont of Muscidifurax
           uniraptor]
 gi|225591248|gb|EEH12390.1| lysyl-tRNA synthetase [Wolbachia endosymbiont of Muscidifurax
           uniraptor]
          Length = 303

 Score = 37.1 bits (85), Expect = 4.9,   Method: Composition-based stats.
 Identities = 13/83 (15%), Positives = 23/83 (27%), Gaps = 4/83 (4%)

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            D+      +    +  G D   + +    + E L           L     G K+ K+ 
Sbjct: 32  PDWGMRWAAFGVNYEAHGKDLTPSAVLSSQICEILGKKPPLLFCYELFLDKEGKKISKSK 91

Query: 242 SGAI----WLNKEMTSPYNFWQY 260
              I    WL    T     + +
Sbjct: 92  GNGISIEEWLTYAPTESLALYIF 114


>gi|188524087|ref|ZP_02557329.2| tryptophanyl-tRNA synthetase [Ureaplasma urealyticum serovar 12
           str. ATCC 33696]
 gi|195660107|gb|EDX53487.1| tryptophanyl-tRNA synthetase [Ureaplasma urealyticum serovar 12
           str. ATCC 33696]
          Length = 333

 Score = 37.1 bits (85), Expect = 4.9,   Method: Composition-based stats.
 Identities = 37/283 (13%), Positives = 85/283 (30%), Gaps = 48/283 (16%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   T + L  G+    +  F   +  ++    +    S+   P+  D +      ++I 
Sbjct: 7   GIQPTNN-LTLGNYLGAIKNFVDLQNDYEVFLFVADLHSLT--PNIFDNTNFFATKRQI- 62

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLL---REIGSFFSVNRMLSFE 157
                I    ++ I          +      L       +L     IG    + +     
Sbjct: 63  -----IATYLAAGID----PKKTCLFYQSDILAIPLLSHILLCSTSIGELTRMTQFKDKS 113

Query: 158 SVRSRLKREQSLSFLEFN-YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL---- 212
           +  +++     +       Y  L A D +     ++  +   G DQ  ++     L    
Sbjct: 114 AKATKMANNTEMIPSGLLTYPALMAADILA----FNADVVPVGQDQKQHLELTRTLADRF 169

Query: 213 GERLKT----PKLFA--LTSPLLTTAS-GTKMGKTLSGA---IWLNKEMTSPYN------ 256
            +R       P+++   + + ++       KM K+       I+LN              
Sbjct: 170 NKRYGQTFKLPQVYIPKIGAKIMDLLDPSVKMSKSSKNPKGVIFLNDSREQIIKKIKGAL 229

Query: 257 -------FWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG 292
                   +   +    +++++    LT L  +EI+     Q 
Sbjct: 230 TDNLNQVKYDVEQQPSVSNLITIYACLTNLTFAEIETKYNQQN 272


>gi|310826436|ref|YP_003958793.1| hypothetical protein ELI_0816 [Eubacterium limosum KIST612]
 gi|308738170|gb|ADO35830.1| hypothetical protein ELI_0816 [Eubacterium limosum KIST612]
          Length = 334

 Score = 37.1 bits (85), Expect = 4.9,   Method: Composition-based stats.
 Identities = 24/119 (20%), Positives = 41/119 (34%), Gaps = 20/119 (16%)

Query: 164 KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFA 223
           K+  ++    F+Y +L A D +     Y   L   G+DQ  ++    D+  R      F+
Sbjct: 119 KQGNNIRVGLFDYPVLMAADILL----YQSDLVPVGNDQKQHVELARDIASRFNQ--QFS 172

Query: 224 LTSPLL-------------TTASGTKMGKTLSGAIWLNKEMTSPYNFWQYW-RNIDDAD 268
            T  L                  G KM K+          +  P    + + R + D+D
Sbjct: 173 PTFKLPEPYFGETGARIMSLQEPGRKMSKSDENINGFVSLLDDPDTVIRKFKRAVTDSD 231


>gi|291522303|emb|CBK80596.1| ribosomal large subunit pseudouridine synthase F [Coprococcus catus
           GD/7]
          Length = 261

 Score = 37.1 bits (85), Expect = 4.9,   Method: Composition-based stats.
 Identities = 9/43 (20%), Positives = 21/43 (48%), Gaps = 1/43 (2%)

Query: 341 ISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSI 383
           + ++E    + L   +  AGF  S  EA R +++  + ++ + 
Sbjct: 9   LHENEDKSDVRLNRFLSDAGFC-SRREADRLIEAGRVTVDGTK 50


>gi|297567257|ref|YP_003686229.1| 30S ribosomal protein S4 [Meiothermus silvanus DSM 9946]
 gi|296851706|gb|ADH64721.1| ribosomal protein S4 [Meiothermus silvanus DSM 9946]
          Length = 205

 Score = 37.1 bits (85), Expect = 4.9,   Method: Composition-based stats.
 Identities = 10/79 (12%), Positives = 34/79 (43%), Gaps = 3/79 (3%)

Query: 320 ATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKI 379
             +    F+ +   + + T ++    +   +    ++ + G A++  +AR+ ++   I +
Sbjct: 68  ERSFRNLFEEASKKKGV-TGTVFLQLLESRLD--NVVFRLGIASTRRQARQFVRHGHILV 124

Query: 380 NNSIISNEKLQIKLQDFDS 398
           N   ++    ++K  D  +
Sbjct: 125 NGKRVNIAGYRVKQGDTIA 143


>gi|227513314|ref|ZP_03943363.1| pseudouridylate synthase [Lactobacillus buchneri ATCC 11577]
 gi|227083515|gb|EEI18827.1| pseudouridylate synthase [Lactobacillus buchneri ATCC 11577]
          Length = 241

 Score = 37.1 bits (85), Expect = 4.9,   Method: Composition-based stats.
 Identities = 9/55 (16%), Positives = 22/55 (40%), Gaps = 1/55 (1%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
           L  ++  AG   S  +A + +    +K+N  ++     ++   D      + +S 
Sbjct: 5   LQKVMAHAG-VASRRKAEKLIVEGHVKVNGKVVKELGTKVTESDEVEVDEVPISK 58


>gi|225874153|ref|YP_002755612.1| pseudouridine synthase rsuA family protein [Acidobacterium
           capsulatum ATCC 51196]
 gi|225791360|gb|ACO31450.1| pseudouridine synthase rsuA family protein [Acidobacterium
           capsulatum ATCC 51196]
          Length = 406

 Score = 37.1 bits (85), Expect = 4.9,   Method: Composition-based stats.
 Identities = 10/65 (15%), Positives = 24/65 (36%), Gaps = 2/65 (3%)

Query: 342 SKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQ-IKLQDFDSTG 400
            ++E   G  L  ++  AG   S  +A   + +  +++N  +++    +     D     
Sbjct: 16  PQEEPRGGERLQKILASAG-VASRRKAEELILAGRVQVNGQVVTEMGFKADAASDHIRVD 74

Query: 401 NIKLS 405
              L 
Sbjct: 75  GKLLQ 79


>gi|182678051|ref|YP_001832197.1| lysyl-tRNA synthetase [Beijerinckia indica subsp. indica ATCC 9039]
 gi|182633934|gb|ACB94708.1| lysyl-tRNA synthetase [Beijerinckia indica subsp. indica ATCC 9039]
          Length = 567

 Score = 37.1 bits (85), Expect = 4.9,   Method: Composition-based stats.
 Identities = 23/151 (15%), Positives = 41/151 (27%), Gaps = 20/151 (13%)

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            D+           +M G D   ++     + + L           L     G K+ K+ 
Sbjct: 246 PDWAMRWYALGVDYEMAGKDLIDSVKLSGRIVQALGGKPPEGFNYELFLDEKGQKISKSK 305

Query: 242 SGAI----WLNKEMTSPYN----FWQY-------WRNIDDADVVSFAKRLTTLPMSEIDR 286
              +    WL     SP +     +Q        + ++    V  +   L   P   I  
Sbjct: 306 GNGLTIEEWLT--YASPESLSLFMYQKPTAAKRLYFDVIPRTVDDYLSFLDAYPRQAIKE 363

Query: 287 MAKLQGKEINEAKKIIATEITTMVHGREEAE 317
                   I+        E  T+ HG +   
Sbjct: 364 QLGNPVWHIHTGH---PPEPETLTHGGQATA 391


>gi|326793582|ref|YP_004311402.1| ribosomal protein S4 [Marinomonas mediterranea MMB-1]
 gi|326544346|gb|ADZ89566.1| ribosomal protein S4 [Marinomonas mediterranea MMB-1]
          Length = 206

 Score = 37.1 bits (85), Expect = 5.0,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 27/63 (42%), Gaps = 8/63 (12%)

Query: 347 SRGMGLLTLI--------VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
           + G  LL L+         +AGF ++  EAR+ +    I +N   ++    Q+K  D  S
Sbjct: 85  ATGENLLQLLESRLDNVVYRAGFGSTRAEARQLVGHKGILVNGETVNVASYQVKAGDVVS 144

Query: 399 TGN 401
              
Sbjct: 145 IRE 147


>gi|325267152|ref|ZP_08133820.1| 30S ribosomal protein S4 [Kingella denitrificans ATCC 33394]
 gi|324981390|gb|EGC17034.1| 30S ribosomal protein S4 [Kingella denitrificans ATCC 33394]
          Length = 206

 Score = 37.1 bits (85), Expect = 5.0,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 22/42 (52%)

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
           GFA++  EAR+ +   A+ +N  +++    Q+K  D  +   
Sbjct: 106 GFASTRAEARQLVSHKALTVNGQVVNIPSFQVKAGDVVAVRE 147


>gi|251777729|ref|ZP_04820649.1| tryptophan--tRNA ligase [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
 gi|243082044|gb|EES47934.1| tryptophan--tRNA ligase [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
          Length = 336

 Score = 37.1 bits (85), Expect = 5.0,   Method: Composition-based stats.
 Identities = 36/189 (19%), Positives = 64/189 (33%), Gaps = 42/189 (22%)

Query: 150 VNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICG 209
           ++RM  ++    +     S++   FNY +L A D +     Y+  L   G+DQ  ++   
Sbjct: 110 LSRMTQYKDKSQKY--GDSIASGLFNYPVLMAADILL----YNTDLVPVGADQKQHLELT 163

Query: 210 IDLGERLK-----------------TPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMT 252
            D+  R                     K+ +L  PL       KM K+          M 
Sbjct: 164 RDIAARFNTTYSDTFKIPDPYIPKAGAKIMSLQDPL------KKMSKSDDNPNGFILIMD 217

Query: 253 SPYNFWQYW-RNIDDAD-----------VVSFAKRL-TTLPMSEIDRMAKLQGKEINEAK 299
            P    +   +++ D+            V +    L T   +  I  +A  +GK   E K
Sbjct: 218 PPDVIKRKISKSVTDSLGIVNYTDDQPGVKNLLNILGTIKGVEPISLVANYEGKGYAELK 277

Query: 300 KIIATEITT 308
             +A  +  
Sbjct: 278 NDVADAVIE 286


>gi|114704907|ref|ZP_01437815.1| lysyl-tRNA synthetase [Fulvimarina pelagi HTCC2506]
 gi|114539692|gb|EAU42812.1| lysyl-tRNA synthetase [Fulvimarina pelagi HTCC2506]
          Length = 546

 Score = 37.1 bits (85), Expect = 5.0,   Method: Composition-based stats.
 Identities = 13/82 (15%), Positives = 24/82 (29%), Gaps = 4/82 (4%)

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           D+           +M G D   ++     +   L  P        L     G K+ K+  
Sbjct: 245 DWALRWAALGVDYEMAGKDLIDSVNLSSKICRALGCPPPEGFNYELFLDDGGQKISKSKG 304

Query: 243 GAI----WLNKEMTSPYNFWQY 260
             +    WL        +F+ +
Sbjct: 305 NGLTIDEWLTYASPKSLSFYMF 326


>gi|114567813|ref|YP_754967.1| 30S ribosomal protein S4 [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
 gi|122317309|sp|Q0AUK8|RS4_SYNWW RecName: Full=30S ribosomal protein S4
 gi|114338748|gb|ABI69596.1| SSU ribosomal protein S4P [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
          Length = 209

 Score = 37.1 bits (85), Expect = 5.0,   Method: Composition-based stats.
 Identities = 18/104 (17%), Positives = 39/104 (37%), Gaps = 14/104 (13%)

Query: 294 EINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLL 353
           ++ E +K      T  ++G +E           F  +   Q +   ++      R   ++
Sbjct: 57  QLREKQK------TRRIYGIQE-----KQFRNYFRKADRKQGITGDNLLVLLERRLDNVV 105

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
               + GFA+S  EAR+ +      IN    +   + +++ D  
Sbjct: 106 Y---RLGFASSRKEARQLVNHGHFFINGHKANIPSMLVRVGDII 146


>gi|89055892|ref|YP_511343.1| ribosomal large subunit pseudouridine synthase D [Jannaschia sp.
           CCS1]
 gi|88865441|gb|ABD56318.1| ribosomal large subunit pseudouridine synthase D [Jannaschia sp.
           CCS1]
          Length = 310

 Score = 37.1 bits (85), Expect = 5.0,   Method: Composition-based stats.
 Identities = 6/26 (23%), Positives = 15/26 (57%)

Query: 370 RHLKSNAIKINNSIISNEKLQIKLQD 395
           R + + A+ IN  ++++ K ++   D
Sbjct: 14  RLIPAGAVAINGRVVTDPKARVAEGD 39


>gi|3122760|sp|O22029|RR4B_CYACA RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|2541890|dbj|BAA22825.1| ribosomal protein S4 [Cyanidium caldarium]
          Length = 192

 Score = 37.1 bits (85), Expect = 5.0,   Method: Composition-based stats.
 Identities = 9/31 (29%), Positives = 18/31 (58%)

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIIS 385
           L+ +AGFA +   AR+ +    +K+N   ++
Sbjct: 96  LVYRAGFAPTLPAARQLVNHGHVKVNGKKVT 126


>gi|317180979|dbj|BAJ58765.1| tryptophanyl-tRNA synthetase [Helicobacter pylori F32]
          Length = 326

 Score = 37.1 bits (85), Expect = 5.0,   Method: Composition-based stats.
 Identities = 42/235 (17%), Positives = 78/235 (33%), Gaps = 34/235 (14%)

Query: 147 FFSVNRMLSFESVR-SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGN 205
             S+  M      +   LK  +S++   FNY IL A D +     Y   L   G DQ  +
Sbjct: 98  QVSMGEMQRMTQFKDKSLKNPKSVNVGLFNYPILMASDILL----YQSDLVPVGEDQKQH 153

Query: 206 IICGIDLGERLKT--PKLFALTSPLLTTASG---------TKMGKTLSG---AIWLNKEM 251
           +    ++ E+        F +  PL+               KM K+  G   AI+L  E 
Sbjct: 154 LELTRNIAEKFNRDFGNCFKVPEPLIAKVGARVMGLDDPKVKMSKSHQGANHAIFLLDEP 213

Query: 252 TSPYNFWQYWRNID------DAD------VVSFAKRLTTLPMSEIDRMAKLQGKEINEAK 299
                  +            D        +++    L+      I+   K +G    + K
Sbjct: 214 DIIVRKIKKAATDSTGVIAFDEKREGVFNLLNIYMLLSNESPENIEERFKNKG--YGDFK 271

Query: 300 KIIATEITTMVHG-REEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLL 353
           K +A  +   +   +E  ++ +   ++        +  P    +  +    MGL+
Sbjct: 272 KELAEVVIQALKPIQERYKEISDDEVKAVLNGGAKKAKPLAQATYQKAKELMGLV 326


>gi|313204570|ref|YP_004043227.1| tryptophanyL-tRNA synthetase [Paludibacter propionicigenes WB4]
 gi|312443886|gb|ADQ80242.1| tryptophanyl-tRNA synthetase [Paludibacter propionicigenes WB4]
          Length = 331

 Score = 37.1 bits (85), Expect = 5.0,   Method: Composition-based stats.
 Identities = 43/245 (17%), Positives = 82/245 (33%), Gaps = 44/245 (17%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRD---ESRRMMRSQ 97
           G   T + LH G+    +  F   +  H     +    S+   P+  D     R+++   
Sbjct: 7   GIRPTGN-LHLGNYFGALRNFISMQNEHNCYFFIADYHSLTTHPTPHDLHGNVRQIL--- 62

Query: 98  EIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFE 157
            ++     +    S+            +     +L    YI  L    SF         +
Sbjct: 63  -VEYLAAGLDPEKSTLYIQSDVPEVVEL---YLFLNMNAYIGELERCTSF--------KD 110

Query: 158 SVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK 217
            +R   ++ ++++     Y  L A D + + +     +   G DQ  ++      G R  
Sbjct: 111 KIR---QQPENVNSGLLTYPTLMAADIL-IHRATKVPV---GKDQEQHLEMTRTFGNRFN 163

Query: 218 T---------PKLFALTSPL--LTTASGT-KMGKT--LSGAIWLNKEMTSPYNFWQYWRN 263
                     P+ F   + L  +   +G+ KMGK+     AI+L  E   P    +    
Sbjct: 164 RLYNVDYFPEPQAFNFGNELVKIPGLNGSGKMGKSEGEGNAIYLADE---PEAIRKKVMK 220

Query: 264 -IDDA 267
            + DA
Sbjct: 221 AVTDA 225


>gi|77918341|ref|YP_356156.1| 30S ribosomal protein S4 [Pelobacter carbinolicus DSM 2380]
 gi|90101701|sp|Q3A6M1|RS4_PELCD RecName: Full=30S ribosomal protein S4
 gi|77544424|gb|ABA87986.1| SSU ribosomal protein S4P [Pelobacter carbinolicus DSM 2380]
          Length = 209

 Score = 37.1 bits (85), Expect = 5.0,   Method: Composition-based stats.
 Identities = 13/82 (15%), Positives = 27/82 (32%), Gaps = 3/82 (3%)

Query: 320 ATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKI 379
                  FD    +  M  ++     V     L + + + GFA+S  E R  ++     +
Sbjct: 71  EKQFRAYFDK---ADSMKGVTGENLLVLLERRLDSAVYRLGFASSRTEGRALVRQGHFLV 127

Query: 380 NNSIISNEKLQIKLQDFDSTGN 401
           N   ++     ++  D      
Sbjct: 128 NGRKVNIPSYVMRPNDVIELRE 149


>gi|198282663|ref|YP_002218984.1| 30S ribosomal protein S4 [Acidithiobacillus ferrooxidans ATCC
           53993]
 gi|218667358|ref|YP_002424856.1| ribosomal protein S4 [Acidithiobacillus ferrooxidans ATCC 23270]
 gi|226697790|sp|B7J4A3|RS4_ACIF2 RecName: Full=30S ribosomal protein S4
 gi|226697791|sp|B5EM98|RS4_ACIF5 RecName: Full=30S ribosomal protein S4
 gi|198247184|gb|ACH82777.1| ribosomal protein S4 [Acidithiobacillus ferrooxidans ATCC 53993]
 gi|218519571|gb|ACK80157.1| ribosomal protein S4 [Acidithiobacillus ferrooxidans ATCC 23270]
          Length = 208

 Score = 37.1 bits (85), Expect = 5.0,   Method: Composition-based stats.
 Identities = 18/104 (17%), Positives = 39/104 (37%), Gaps = 14/104 (13%)

Query: 292 GKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMG 351
           G ++ E +KI        ++G  E +         F  +  ++ +    + +    R   
Sbjct: 54  GGQLREKQKI------RRIYGVLEGQ-----FRRYFQRASQARGVTGELLLRFLELRLDN 102

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           +     + GF  S  EAR+ ++   I +N   +     Q++  D
Sbjct: 103 VAY---RLGFGASRAEARQVVRHGHILVNGRRVDIPSYQVRAGD 143


>gi|185178720|ref|ZP_02554799.2| tryptophanyl-tRNA synthetase [Ureaplasma urealyticum serovar 5 str.
           ATCC 27817]
 gi|188024175|ref|ZP_02570038.2| tryptophanyl-tRNA synthetase [Ureaplasma urealyticum serovar 7 str.
           ATCC 27819]
 gi|188518537|ref|ZP_02556782.2| tryptophanyl-tRNA synthetase [Ureaplasma urealyticum serovar 11
           str. ATCC 33695]
 gi|195867752|ref|ZP_03079753.1| tryptophanyl-tRNA synthetase [Ureaplasma urealyticum serovar 9 str.
           ATCC 33175]
 gi|198273362|ref|ZP_03205898.1| tryptophanyl-tRNA synthetase [Ureaplasma urealyticum serovar 4 str.
           ATCC 27816]
 gi|209554624|ref|YP_002284571.1| tryptophanyl-tRNA synthetase [Ureaplasma urealyticum serovar 10
           str. ATCC 33699]
 gi|225550713|ref|ZP_03771662.1| tryptophan--tRNA ligase [Ureaplasma urealyticum serovar 2 str. ATCC
           27814]
 gi|225551283|ref|ZP_03772229.1| tryptophan--tRNA ligase [Ureaplasma urealyticum serovar 8 str. ATCC
           27618]
 gi|184209319|gb|EDU06362.1| tryptophanyl-tRNA synthetase [Ureaplasma urealyticum serovar 5 str.
           ATCC 27817]
 gi|188018810|gb|EDU56850.1| tryptophanyl-tRNA synthetase [Ureaplasma urealyticum serovar 7 str.
           ATCC 27819]
 gi|188997926|gb|EDU67023.1| tryptophanyl-tRNA synthetase [Ureaplasma urealyticum serovar 11
           str. ATCC 33695]
 gi|195660607|gb|EDX53863.1| tryptophanyl-tRNA synthetase [Ureaplasma urealyticum serovar 9 str.
           ATCC 33175]
 gi|198249882|gb|EDY74662.1| tryptophanyl-tRNA synthetase [Ureaplasma urealyticum serovar 4 str.
           ATCC 27816]
 gi|209542125|gb|ACI60354.1| tryptophanyl-tRNA synthetase [Ureaplasma urealyticum serovar 10
           str. ATCC 33699]
 gi|225379098|gb|EEH01463.1| tryptophan--tRNA ligase [Ureaplasma urealyticum serovar 8 str. ATCC
           27618]
 gi|225379867|gb|EEH02229.1| tryptophan--tRNA ligase [Ureaplasma urealyticum serovar 2 str. ATCC
           27814]
          Length = 333

 Score = 37.1 bits (85), Expect = 5.0,   Method: Composition-based stats.
 Identities = 37/283 (13%), Positives = 85/283 (30%), Gaps = 48/283 (16%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   T + L  G+    +  F   +  ++    +    S+   P+  D +      ++I 
Sbjct: 7   GIQPTNN-LTLGNYLGAIKNFVDLQNDYEVFLFVADLHSLT--PNIFDNTNFFATKRQI- 62

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLL---REIGSFFSVNRMLSFE 157
                I    ++ I          +      L       +L     IG    + +     
Sbjct: 63  -----IATYLAAGID----PKKTCLFYQSDILAIPLLSHILLCSTSIGELTRMTQFKDKS 113

Query: 158 SVRSRLKREQSLSFLEFN-YMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL---- 212
           +  +++     +       Y  L A D +     ++  +   G DQ  ++     L    
Sbjct: 114 AKATKMANNTEMIPSGLLTYPALMAADILA----FNADVVPVGQDQKQHLELTRTLADRF 169

Query: 213 GERLKT----PKLFA--LTSPLLTTAS-GTKMGKTLSGA---IWLNKEMTSPYN------ 256
            +R       P+++   + + ++       KM K+       I+LN              
Sbjct: 170 NKRYGQTFKLPQVYIPKIGAKIMDLLDPSVKMSKSSKNPKGVIFLNDSREQIIKKIKGAL 229

Query: 257 -------FWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQG 292
                   +   +    +++++    LT L  +EI+     Q 
Sbjct: 230 TDNLNQVKYDVEQQPSVSNLITIYACLTNLTFAEIETKYNQQN 272


>gi|58696696|ref|ZP_00372245.1| lysyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           simulans]
 gi|58537121|gb|EAL60233.1| lysyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           simulans]
          Length = 401

 Score = 37.1 bits (85), Expect = 5.0,   Method: Composition-based stats.
 Identities = 13/83 (15%), Positives = 23/83 (27%), Gaps = 4/83 (4%)

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            D+      +    +  G D   + +    + E L           L     G K+ K+ 
Sbjct: 113 PDWGMRWAAFGVNYEAHGKDLTPSAVLSSQICEILGEKPPLLFCYELFLDKEGKKISKSK 172

Query: 242 SGAI----WLNKEMTSPYNFWQY 260
              I    WL    T     + +
Sbjct: 173 GNGISIEEWLTYAPTESLALYIF 195


>gi|332968427|gb|EGK07494.1| 30S ribosomal protein S4 [Kingella kingae ATCC 23330]
          Length = 206

 Score = 37.1 bits (85), Expect = 5.1,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 22/42 (52%)

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
           GFA++  EAR+ +   A+ +N  +++    Q+K  D  +   
Sbjct: 106 GFASTRAEARQLVSHKALTVNGQVVNIPSFQVKAGDVVAVRE 147


>gi|294789218|ref|ZP_06754457.1| ribosomal protein S4 [Simonsiella muelleri ATCC 29453]
 gi|294482959|gb|EFG30647.1| ribosomal protein S4 [Simonsiella muelleri ATCC 29453]
          Length = 206

 Score = 37.1 bits (85), Expect = 5.1,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 22/42 (52%)

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
           GFA++  EAR+ +   A+ +N  +++    Q+K  D  +   
Sbjct: 106 GFASTRAEARQLVSHKALTVNGQVVNIPSFQVKAGDVVAVRE 147


>gi|302882319|ref|XP_003040070.1| hypothetical protein NECHADRAFT_72284 [Nectria haematococca mpVI
           77-13-4]
 gi|256720937|gb|EEU34357.1| hypothetical protein NECHADRAFT_72284 [Nectria haematococca mpVI
           77-13-4]
          Length = 511

 Score = 37.1 bits (85), Expect = 5.1,   Method: Composition-based stats.
 Identities = 9/35 (25%), Positives = 18/35 (51%)

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           FA+S  +AR+ +   A+K+N   + +    +   D
Sbjct: 173 FASSVRQARQFIIHGAVKVNGKKMVHPSYALNPGD 207


>gi|199597823|ref|ZP_03211249.1| tryptophanyl-tRNA synthetase II [Lactobacillus rhamnosus HN001]
 gi|229551448|ref|ZP_04440173.1| tryptophan--tRNA ligase [Lactobacillus rhamnosus LMS2-1]
 gi|258509604|ref|YP_003172355.1| tryptophanyl-tRNA synthetase II [Lactobacillus rhamnosus GG]
 gi|258540808|ref|YP_003175307.1| tryptophanyl-tRNA synthetase II [Lactobacillus rhamnosus Lc 705]
 gi|199591259|gb|EDY99339.1| tryptophanyl-tRNA synthetase II [Lactobacillus rhamnosus HN001]
 gi|229315173|gb|EEN81146.1| tryptophan--tRNA ligase [Lactobacillus rhamnosus LMS2-1]
 gi|257149531|emb|CAR88504.1| Tryptophanyl-tRNA synthetase [Lactobacillus rhamnosus GG]
 gi|257152484|emb|CAR91456.1| Tryptophanyl-tRNA synthetase [Lactobacillus rhamnosus Lc 705]
 gi|259650870|dbj|BAI43032.1| tryptophanyl-tRNA synthetase [Lactobacillus rhamnosus GG]
          Length = 338

 Score = 37.1 bits (85), Expect = 5.1,   Method: Composition-based stats.
 Identities = 36/231 (15%), Positives = 77/231 (33%), Gaps = 45/231 (19%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     LQ +G ++P  ++    ++         +      ++I+ 
Sbjct: 12  PTGR-LHIGHYIGSLKNRVELQNSGEYEPFVMIADTQAL---------TDNANDPEKIRH 61

Query: 102 NIEKIKGIFSSFIKYG----TGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFE 157
           ++          + Y           +++ +          +L        +VNR+    
Sbjct: 62  SL------LEVALDYLAVGIDPDKTTILVQS----QIPALFELTAYYLDLVTVNRLERNP 111

Query: 158 SVRSRLKR---EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE 214
           +V++ +K+     S+    F Y + QA D           + +G  DQ   +    ++  
Sbjct: 112 TVKAEIKQKAFGDSVPAGFFIYPVSQAADITAFKA---TTVPVG-DDQEPMLEQTREIVR 167

Query: 215 RLKT---------PKLFALTSPL--LTTASGT-KMGKTLSGAIWLNKEMTS 253
                        P+ +     L  L    G  KM K+L+  I+L  +  +
Sbjct: 168 TFNRTYHKDVLVEPEGYFPPKGLGRLPGIDGNAKMSKSLNNGIYLADDADT 218


>gi|56964300|ref|YP_176031.1| tryptophanyl-tRNA synthetase [Bacillus clausii KSM-K16]
 gi|56910543|dbj|BAD65070.1| tryptophanyl-tRNA synthetase [Bacillus clausii KSM-K16]
          Length = 329

 Score = 37.1 bits (85), Expect = 5.1,   Method: Composition-based stats.
 Identities = 38/235 (16%), Positives = 75/235 (31%), Gaps = 40/235 (17%)

Query: 35  VVTAYIGYDLTASSLHAGHLTQLMLLFWLQ--KTGHKPISLMGGGTSIIGDPSFRDESRR 92
           + T + G   + + L  G+      L      +  +     +    + I  P  R + R 
Sbjct: 1   MQTVFSGIQPSGT-LTLGNYLG--ALKHFADMQNDYDCFFCIVDQHA-ITVPQERLKLRE 56

Query: 93  MMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNR 152
            +RS         I    S+          A +     W+  ++ +  + E+       R
Sbjct: 57  NIRSLAALYIASGIDPNKSTLFIQSEVPAHAQL----GWM--MQCVSYIGEL------ER 104

Query: 153 MLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDL 212
           M      + +   ++++S     Y  L A D + L +     +   G DQ  ++    +L
Sbjct: 105 MTQ---FKDKSSGKEAVSAALLTYPPLMAADIL-LYQTDIVPV---GEDQKQHLELTRNL 157

Query: 213 GERLKTPKLFALTSP----------LLTTAS-GTKMGKTLSGA----IWLNKEMT 252
            ER         T P          +++      KM K+   A      L++  T
Sbjct: 158 AERFNAKYNDIFTVPDVRIPKVGARIMSLNDPHKKMSKSNPNAKSYISMLDEPKT 212


>gi|8039806|sp|P56396|SYW_HELPY RecName: Full=Tryptophanyl-tRNA synthetase; AltName:
           Full=Tryptophan--tRNA ligase; Short=TrpRS
          Length = 326

 Score = 37.1 bits (85), Expect = 5.1,   Method: Composition-based stats.
 Identities = 36/188 (19%), Positives = 62/188 (32%), Gaps = 39/188 (20%)

Query: 147 FFSVNRMLSFESVR-SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGN 205
             S+  M      +   LK  +S++   FNY IL A D +     Y   L   G DQ  +
Sbjct: 98  QVSMGEMQRMTQFKDKSLKNPKSVNVGLFNYPILMASDILL----YQSDLVPVGEDQKQH 153

Query: 206 IICGIDLGERLKT--PKLFALTSPLLTTASG---------TKMGKTLSG---AIWLNKEM 251
           +    ++ E+        F +  PL+               KM K+  G   AI+L   +
Sbjct: 154 LELTRNIAEKFNRDFGNCFKVPEPLIAKVGARVMGLDDPKVKMSKSHQGANHAIFL---L 210

Query: 252 TSPYNFWQYWRNIDDADV---------------VSFAKRLTTLPMSEIDRMAKLQGKEIN 296
             P    +  +      +               ++    L+      I+   K +G    
Sbjct: 211 DEPDIIVKKIKKAATDSMGVIAFDEKREGIFNLLNIYMLLSNESPENIEERFKNKG--YG 268

Query: 297 EAKKIIAT 304
           + KK +A 
Sbjct: 269 DFKKELAE 276


>gi|332828204|gb|EGK00916.1| 30S ribosomal protein S4 [Dysgonomonas gadei ATCC BAA-286]
          Length = 202

 Score = 37.1 bits (85), Expect = 5.1,   Method: Composition-based stats.
 Identities = 12/82 (14%), Positives = 31/82 (37%), Gaps = 3/82 (3%)

Query: 320 ATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKI 379
                  FD ++ S+ + T  +    +   +    ++ + G A +   AR+ +    I +
Sbjct: 65  ERQFRNMFDKALSSRGI-TGEVLLQMLESRLD--NIVFRLGIAPTRAAARQLVSHRHITV 121

Query: 380 NNSIISNEKLQIKLQDFDSTGN 401
           + S+++     IK     +   
Sbjct: 122 DGSVVNIPSYTIKPGQLIAVRE 143


>gi|320093495|ref|ZP_08025392.1| cytotoxin/hemolysin [Actinomyces sp. oral taxon 178 str. F0338]
 gi|319979540|gb|EFW11005.1| cytotoxin/hemolysin [Actinomyces sp. oral taxon 178 str. F0338]
          Length = 277

 Score = 37.1 bits (85), Expect = 5.1,   Method: Composition-based stats.
 Identities = 11/58 (18%), Positives = 25/58 (43%), Gaps = 8/58 (13%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSII------SNEKLQIKLQDFDSTGNIKLSFG 407
           +V+ G A S   A+  ++S  ++++  ++       N    + +   D  G +  S G
Sbjct: 10  LVRRGIARSRGHAQELIESGRVRLDGEVVLKPARQMNPAQAVVVAQGDDEGYV--SRG 65


>gi|319782459|ref|YP_004141935.1| pseudouridine synthase [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317168347|gb|ADV11885.1| pseudouridine synthase [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 250

 Score = 37.1 bits (85), Expect = 5.1,   Method: Composition-based stats.
 Identities = 10/62 (16%), Positives = 25/62 (40%), Gaps = 4/62 (6%)

Query: 342 SKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
           S  + + G+ L   + K G   S  +A   +    +++   ++ +  L++   D D    
Sbjct: 9   SGRQAAPGVSLNRALSKLGLC-SRTQAEVLIAEGRVRVGGKVVRDAALRV---DLDRDRI 64

Query: 402 IK 403
           + 
Sbjct: 65  VV 66


>gi|291546222|emb|CBL19330.1| leucyl-tRNA synthetase [Ruminococcus sp. SR1/5]
          Length = 805

 Score = 37.1 bits (85), Expect = 5.1,   Method: Composition-based stats.
 Identities = 18/96 (18%), Positives = 35/96 (36%), Gaps = 15/96 (15%)

Query: 229 LTTASGTKMGKTLSGAIWLNK-------EMTSPYNFW-------QYWRNIDDADVVSFAK 274
           +T  +G KM K+    I  +        +    Y  +         W +     V  F K
Sbjct: 573 ITGKNGIKMSKSKGNVISPDDLVNDYGCDSLRMYELFVGPPELDAEWDDRGIDGVSRFLK 632

Query: 275 RLTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMV 310
           R   L +  I++      KE+ + +  +  +IT+ +
Sbjct: 633 RFWNLALDSIEKDIPA-TKEMEKTRHKMVYDITSRL 667


>gi|256545246|ref|ZP_05472611.1| ribosomal large subunit pseudouridine synthase B [Anaerococcus
           vaginalis ATCC 51170]
 gi|256399073|gb|EEU12685.1| ribosomal large subunit pseudouridine synthase B [Anaerococcus
           vaginalis ATCC 51170]
          Length = 231

 Score = 37.1 bits (85), Expect = 5.1,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 28/59 (47%), Gaps = 6/59 (10%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD--FDSTGNIKLSFGKKNHI 412
           I K GFA S  ++  ++K+  + +N + + +   Q+K +D        +K+    KN  
Sbjct: 7   IAKTGFA-SRRKSEEYIKNGKVFVNGNKLEDLSYQVKEEDEVKIDGKILKIQ---KNFY 61


>gi|254509192|ref|ZP_05121290.1| ribosomal large subunit pseudouridine synthase F [Vibrio
           parahaemolyticus 16]
 gi|219547897|gb|EED24924.1| ribosomal large subunit pseudouridine synthase F [Vibrio
           parahaemolyticus 16]
          Length = 345

 Score = 37.1 bits (85), Expect = 5.1,   Method: Composition-based stats.
 Identities = 9/30 (30%), Positives = 14/30 (46%), Gaps = 1/30 (3%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSI 383
             I + GF  S  EA R ++   + IN  +
Sbjct: 11  KFISETGFC-SRREADRLIEQGRVTINGQV 39


>gi|193214825|ref|YP_001996024.1| 30S ribosomal protein S4 [Chloroherpeton thalassium ATCC 35110]
 gi|226697824|sp|B3QYE9|RS4_CHLT3 RecName: Full=30S ribosomal protein S4
 gi|193088302|gb|ACF13577.1| ribosomal protein S4 [Chloroherpeton thalassium ATCC 35110]
          Length = 203

 Score = 37.1 bits (85), Expect = 5.1,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 26/58 (44%), Gaps = 8/58 (13%)

Query: 349 GMGLLTLI--------VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
           G  L+ L+         +AGF+ S   AR+ +    ++IN + ++    Q+K  D   
Sbjct: 84  GENLVKLLECRFDNVVFRAGFSPSRAGARQLVSHCHLRINGNKVNIPSYQVKPGDVID 141


>gi|189463704|ref|ZP_03012489.1| hypothetical protein BACINT_00037 [Bacteroides intestinalis DSM
           17393]
 gi|189438654|gb|EDV07639.1| hypothetical protein BACINT_00037 [Bacteroides intestinalis DSM
           17393]
          Length = 234

 Score = 37.1 bits (85), Expect = 5.1,   Method: Composition-based stats.
 Identities = 12/62 (19%), Positives = 28/62 (45%), Gaps = 1/62 (1%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHII 413
             +  AG   S  EA   + +  + +N ++++    +IK  D     +  +S  +K +I+
Sbjct: 3   KFLANAGVC-SRREADEFITAGVVSVNGAVVTELGTKIKRGDEVKFHDQPVSIERKIYIL 61

Query: 414 CH 415
            +
Sbjct: 62  LN 63


>gi|159039806|ref|YP_001539059.1| RNA-binding S4 domain-containing protein [Salinispora arenicola
           CNS-205]
 gi|157918641|gb|ABW00069.1| RNA-binding S4 domain protein [Salinispora arenicola CNS-205]
          Length = 208

 Score = 37.1 bits (85), Expect = 5.1,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 23/55 (41%), Gaps = 6/55 (10%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGK 408
            ++ +AG+A S + AR+ +K     +N   +     ++K  D           GK
Sbjct: 102 NVVYRAGYAKSRDMARQLVKHGHFTVNGRKVDIPSYRVKEHDIVEV------RGK 150


>gi|83312710|ref|YP_422974.1| lysyl-tRNA synthetase [Magnetospirillum magneticum AMB-1]
 gi|82947551|dbj|BAE52415.1| Lysyl-tRNA synthetase [Magnetospirillum magneticum AMB-1]
          Length = 528

 Score = 37.1 bits (85), Expect = 5.1,   Method: Composition-based stats.
 Identities = 22/151 (14%), Positives = 42/151 (27%), Gaps = 15/151 (9%)

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           D+           +M G D   ++     +   L       LT  L     G K+ K+  
Sbjct: 240 DWGMRWVALGVDYEMSGKDLIPSVQLSTRIAAILGGRAPMNLTYELFLDDQGQKISKSKG 299

Query: 243 GAIWL-NKEMTSPYN-----FWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEIN 296
             + + +    +P        +Q           +  +    +    +D      GK  +
Sbjct: 300 NGLAVEDWLKYAPQESLALFMYQK--------PKTAKRLYFDVIPRAVDEYLAYLGKFPS 351

Query: 297 EAKKIIATEITTMVH-GREEAEKAATAAMEC 326
           E            +H G+  AE A  +    
Sbjct: 352 EEPGKKLDNPVWHIHGGKPPAEDAHLSFNIL 382


>gi|288559384|ref|YP_003422870.1| isoleucyl-tRNA synthetase IleS [Methanobrevibacter ruminantium M1]
 gi|288542094|gb|ADC45978.1| isoleucyl-tRNA synthetase IleS [Methanobrevibacter ruminantium M1]
          Length = 1143

 Score = 37.1 bits (85), Expect = 5.2,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 35/109 (32%), Gaps = 18/109 (16%)

Query: 197 MGGSDQ---WGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTS 253
             G DQ   W     G  +    + P    L    +    G KM K+L   +        
Sbjct: 619 CEGHDQTRGWFYSQLGTGVIALDQAPYNKVLMHGFVLDEEGKKMSKSLGNVV-------Q 671

Query: 254 PYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKII 302
           P    + +     ADV+ F       P  ++    K    E+N  KK+ 
Sbjct: 672 PEEVIEKY----GADVLRFYLLWACKPWDDL----KFVWDELNNVKKMF 712


>gi|328773608|gb|EGF83645.1| hypothetical protein BATDEDRAFT_85161 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 1122

 Score = 37.1 bits (85), Expect = 5.2,   Method: Composition-based stats.
 Identities = 19/78 (24%), Positives = 31/78 (39%), Gaps = 7/78 (8%)

Query: 312 GREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTL-IVKAGFATSTNEARR 370
           G+E  E AA A        I         I  ++ S G GLL++  ++ G A    EAR 
Sbjct: 567 GKEFVEDAAEARR----KGISQLDALDAEIRDEDNSSGKGLLSMKFMQRGLAQQKKEARE 622

Query: 371 HLKSNAIKINNSIISNEK 388
             +    +++     +E 
Sbjct: 623 LAQQ--ARLDLEREEDEN 638


>gi|322388470|ref|ZP_08062073.1| tryptophan--tRNA ligase [Streptococcus infantis ATCC 700779]
 gi|321140783|gb|EFX36285.1| tryptophan--tRNA ligase [Streptococcus infantis ATCC 700779]
          Length = 341

 Score = 37.1 bits (85), Expect = 5.2,   Method: Composition-based stats.
 Identities = 37/246 (15%), Positives = 63/246 (25%), Gaps = 46/246 (18%)

Query: 44  LTASSLHAGHLTQLMLLFWLQK--TGHKPISLMGG---GTSIIGDPSFRDESRRMMRSQE 98
            T   LH GH    +    L +    +     +      T    DP              
Sbjct: 12  PTGK-LHIGHYVGSLKNRVLLQEENKYDMFVFLADQQALTDHAKDPQ------------- 57

Query: 99  IQENIEKIKGIFSSFIKYGTGKTDALMLNNETW--LCSIKYIDLLREIGSFFSVNRMLSF 156
               +E I  +   ++  G     A +        L  +    +     +    N  +  
Sbjct: 58  --TIVESIGNVALDYLAVGLDPNKATIFIQSQIPELAELSMYYMNLVSLARLERNPTVKT 115

Query: 157 ESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERL 216
           E  +          FL   Y + QA D      N    L   G+DQ   I    ++    
Sbjct: 116 EIAQKGFGESIPTGFL--VYPVAQAADITAFKAN----LVPVGNDQKPMIEQTREIVRSF 169

Query: 217 KTP-------------KLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRN 263
                                   L       KM K+L+  I+L  +  +     +   +
Sbjct: 170 NHTYNCDVLVEPEGIYPEHEGAGRLPGLDGNAKMSKSLNNGIYLADDADT---LRKKVMS 226

Query: 264 I-DDAD 268
           +  D D
Sbjct: 227 MYTDPD 232


>gi|310821620|ref|YP_003953978.1| tryptophanyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
 gi|309394692|gb|ADO72151.1| Tryptophanyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
          Length = 337

 Score = 37.1 bits (85), Expect = 5.2,   Method: Composition-based stats.
 Identities = 28/152 (18%), Positives = 46/152 (30%), Gaps = 36/152 (23%)

Query: 144 IGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQ- 202
           +G+      +    S + ++ +  S  F  F Y +L A D +     Y   +   G DQ 
Sbjct: 92  LGTVVPHANLERAHSYKDKVAKGISPDFGLFAYPVLMAADILL----YSADVVPVGKDQV 147

Query: 203 -----------WGNIIC--GIDLGERLKTPKLFA---LTSP---------LLTTASGTKM 237
                        N+    G D  +     K  A   L  P          +    G KM
Sbjct: 148 QHIEFARDWAVKFNLTYVPGYDPADPEGKQKGHAPGILKLPEARLQESTATVMGVDGQKM 207

Query: 238 GKTLSGAI-WLNKEMTSPYNFWQYWRNI-DDA 267
            K+    I     E        + + +I  D+
Sbjct: 208 SKSYGNTIDLFGDEK----EIKKRFMSIKSDS 235


>gi|210135412|ref|YP_002301851.1| tryptophanyl-tRNA synthetase [Helicobacter pylori P12]
 gi|210133380|gb|ACJ08371.1| tryptophanyl-tRNA synthetase [Helicobacter pylori P12]
          Length = 326

 Score = 37.1 bits (85), Expect = 5.2,   Method: Composition-based stats.
 Identities = 36/188 (19%), Positives = 62/188 (32%), Gaps = 39/188 (20%)

Query: 147 FFSVNRMLSFESVR-SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGN 205
             S+  M      +   LK  +S++   FNY IL A D +     Y   L   G DQ  +
Sbjct: 98  QVSMGEMQRMTQFKDKSLKNPKSVNVGLFNYPILMASDILL----YQSDLVPVGEDQKQH 153

Query: 206 IICGIDLGERLKT--PKLFALTSPLLTTASG---------TKMGKTLSG---AIWLNKEM 251
           +    ++ E+        F +  PL+               KM K+  G   AI+L   +
Sbjct: 154 LELTRNIAEKFNRDFGSCFKVPEPLIAKVGARVMGLDDPKVKMSKSHQGANHAIFL---L 210

Query: 252 TSPYNFWQYWRNIDDADV---------------VSFAKRLTTLPMSEIDRMAKLQGKEIN 296
             P    +  +      +               ++    L+      I+   K +G    
Sbjct: 211 DEPDIIVKKIKKAATDSMGVIAFDEKREGVFNLLNIYMLLSNESPENIEERFKNKG--YG 268

Query: 297 EAKKIIAT 304
           + KK +A 
Sbjct: 269 DFKKELAE 276


>gi|53715440|ref|YP_101432.1| 30S ribosomal protein S4 [Bacteroides fragilis YCH46]
 gi|60683412|ref|YP_213556.1| 30S ribosomal protein S4 [Bacteroides fragilis NCTC 9343]
 gi|265767574|ref|ZP_06095240.1| ribosomal protein S4 [Bacteroides sp. 2_1_16]
 gi|61215469|sp|Q64NN4|RS4_BACFR RecName: Full=30S ribosomal protein S4
 gi|81313536|sp|Q5L8D5|RS4_BACFN RecName: Full=30S ribosomal protein S4
 gi|52218305|dbj|BAD50898.1| 30S ribosomal protein S4 [Bacteroides fragilis YCH46]
 gi|60494846|emb|CAH09653.1| putative 30S ribosomal protein S4 [Bacteroides fragilis NCTC 9343]
 gi|263252879|gb|EEZ24391.1| ribosomal protein S4 [Bacteroides sp. 2_1_16]
 gi|301164897|emb|CBW24458.1| putative 30S ribosomal protein S4 [Bacteroides fragilis 638R]
          Length = 201

 Score = 37.1 bits (85), Expect = 5.2,   Method: Composition-based stats.
 Identities = 8/82 (9%), Positives = 28/82 (34%), Gaps = 3/82 (3%)

Query: 320 ATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKI 379
                  F+ +  ++ + T  +    +   +    ++ + G A +   AR+ +    I +
Sbjct: 65  EKQFRNLFEKAATAKGI-TGEVLLQMLEGRLD--NIVFRLGIAPTRAAARQLVGHKHITV 121

Query: 380 NNSIISNEKLQIKLQDFDSTGN 401
           +  +++     +K         
Sbjct: 122 DGQVVNIPSYAVKPGQLIGVRE 143


>gi|329851025|ref|ZP_08265782.1| ribosomal large subunit pseudouridine synthase F [Asticcacaulis
           biprosthecum C19]
 gi|328839871|gb|EGF89443.1| ribosomal large subunit pseudouridine synthase F [Asticcacaulis
           biprosthecum C19]
          Length = 253

 Score = 37.1 bits (85), Expect = 5.3,   Method: Composition-based stats.
 Identities = 9/63 (14%), Positives = 22/63 (34%), Gaps = 6/63 (9%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           + +  + L   + ++G   S  EA   ++   + I    + +   +I          + L
Sbjct: 8   DGAEPVRLNKWLAQSGVC-SRREADTLIEEGCVAIAGETVRDAGRKI-----LPGQTVTL 61

Query: 405 SFG 407
             G
Sbjct: 62  DRG 64


>gi|319784706|ref|YP_004144182.1| RNA-binding S4 domain protein [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
 gi|317170594|gb|ADV14132.1| RNA-binding S4 domain protein [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
          Length = 254

 Score = 37.1 bits (85), Expect = 5.3,   Method: Composition-based stats.
 Identities = 6/29 (20%), Positives = 14/29 (48%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNS 382
            L+V+ G   S + AR  ++   + ++  
Sbjct: 15  DLLVQRGLFASRSRARDAVERGTVTVDGV 43


>gi|322436519|ref|YP_004218731.1| ribosomal protein S4 [Acidobacterium sp. MP5ACTX9]
 gi|321164246|gb|ADW69951.1| ribosomal protein S4 [Acidobacterium sp. MP5ACTX9]
          Length = 210

 Score = 37.1 bits (85), Expect = 5.3,   Method: Composition-based stats.
 Identities = 11/48 (22%), Positives = 23/48 (47%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
            +  + G ATS  +AR+ ++   I++N   ++    Q K+ D  +   
Sbjct: 104 NVCYRLGLATSRRQARQVVRHGHIQVNGRKVNIPSFQCKVGDEIAVRE 151


>gi|289422683|ref|ZP_06424523.1| ribosomal protein S4 [Peptostreptococcus anaerobius 653-L]
 gi|289156862|gb|EFD05487.1| ribosomal protein S4 [Peptostreptococcus anaerobius 653-L]
          Length = 201

 Score = 37.1 bits (85), Expect = 5.3,   Method: Composition-based stats.
 Identities = 10/48 (20%), Positives = 20/48 (41%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
            L+ + G A S  +AR+ +    I +N   ++     + + D  S   
Sbjct: 93  NLVYRMGLANSIRQARQMVGHGNIHVNGRKVNIPSFIVSVGDEISLRE 140


>gi|210622436|ref|ZP_03293168.1| hypothetical protein CLOHIR_01116 [Clostridium hiranonis DSM 13275]
 gi|210154252|gb|EEA85258.1| hypothetical protein CLOHIR_01116 [Clostridium hiranonis DSM 13275]
          Length = 333

 Score = 37.1 bits (85), Expect = 5.3,   Method: Composition-based stats.
 Identities = 43/231 (18%), Positives = 78/231 (33%), Gaps = 34/231 (14%)

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL 163
           E  K + + +I  G       +         ++ + +L  +     +NRM  F+  ++R 
Sbjct: 59  ENAKKLLAQYIACGLDPEKNTIFIQSHVKEHLELMWVLNTMTYMGELNRMTQFKD-KAR- 116

Query: 164 KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFA 223
           K E +L+   F Y +L A D +     Y   L   G DQ  ++    DL  R      ++
Sbjct: 117 KSEANLNAGLFTYPVLMAADILL----YQTDLVPVGDDQKQHLELARDLANRFNNR--YS 170

Query: 224 LTSPLLTT-------------ASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRN-IDDAD- 268
            T  +                    KM K+             P    +  +  + D++ 
Sbjct: 171 DTFKIPEGYYPKEAARVMSLQDPTKKMSKSDENVNGFILLEDDPDTIRRKIKKCVTDSEG 230

Query: 269 VVSF----------AKRLTTLPMSEIDRMAKL-QGKEINEAKKIIATEITT 308
           VV +              + L    ID + K+ +GK   + K   A  I +
Sbjct: 231 VVRYSPEQPGIKNLLDIYSALSGKSIDEIVKMYEGKGYGDFKADTAEVIIS 281


>gi|153956201|ref|YP_001396966.1| leucyl-tRNA synthetase [Clostridium kluyveri DSM 555]
 gi|219856526|ref|YP_002473648.1| hypothetical protein CKR_3183 [Clostridium kluyveri NBRC 12016]
 gi|189082994|sp|A5N399|SYL_CLOK5 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|146349059|gb|EDK35595.1| LeuS [Clostridium kluyveri DSM 555]
 gi|219570250|dbj|BAH08234.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 811

 Score = 37.1 bits (85), Expect = 5.3,   Method: Composition-based stats.
 Identities = 7/40 (17%), Positives = 14/40 (35%), Gaps = 7/40 (17%)

Query: 228 LLTTASGTKMGKTLSGAIWLNK-------EMTSPYNFWQY 260
           L+    G KM K+    I  +        ++   Y  + +
Sbjct: 562 LILGPDGQKMSKSKGNTISPDDCIQKYGSDVFRMYLMFGF 601


>gi|86359602|ref|YP_471494.1| putative heat shock protein (ribosome-associated) [Rhizobium etli
           CFN 42]
 gi|86283704|gb|ABC92767.1| putative heat shock protein (ribosome-associated) [Rhizobium etli
           CFN 42]
          Length = 134

 Score = 37.1 bits (85), Expect = 5.3,   Method: Composition-based stats.
 Identities = 13/71 (18%), Positives = 24/71 (33%), Gaps = 12/71 (16%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF----DSTGNIKLSFG 407
           +   +       S + A+ H++S  ++IN    S     +K  D         ++ L   
Sbjct: 15  IDKWLFFTRMVKSRSLAQSHVQSGHVRINGERCSQPSQMVKPGDRIELTLERRDVVL--- 71

Query: 408 KKNHIICHLCG 418
                I  L G
Sbjct: 72  -----IVRLVG 77


>gi|317182502|dbj|BAJ60286.1| tryptophanyl-tRNA synthetase [Helicobacter pylori F57]
          Length = 326

 Score = 37.1 bits (85), Expect = 5.3,   Method: Composition-based stats.
 Identities = 42/235 (17%), Positives = 78/235 (33%), Gaps = 34/235 (14%)

Query: 147 FFSVNRMLSFESVR-SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGN 205
             S+  M      +   LK  +S++   FNY IL A D +     Y   L   G DQ  +
Sbjct: 98  QVSMGEMQRMTQFKDKSLKNPKSVNVGLFNYPILMASDILL----YQSDLVPVGEDQKQH 153

Query: 206 IICGIDLGERLKT--PKLFALTSPLLTTASG---------TKMGKTLSG---AIWLNKEM 251
           +    ++ E+        F +  PL+               KM K+  G   AI+L  E 
Sbjct: 154 LELTRNIAEKFNRDFGNCFKVPEPLIAKVGARVMGLDDPKVKMSKSHQGANHAIFLLDEP 213

Query: 252 TSPYNFWQYWRNID------DAD------VVSFAKRLTTLPMSEIDRMAKLQGKEINEAK 299
                  +            D        +++    L+      I+   K +G    + K
Sbjct: 214 DIIVRKIKKAATDSTGVIAFDEKREGVFNLLNIYMLLSNESPENIEERFKNKG--YGDFK 271

Query: 300 KIIATEITTMVHG-REEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLL 353
           K +A  +   +   +E  ++ +   ++        +  P    +  +    MGL+
Sbjct: 272 KELAEVVIQALKPIQERYKEISDDEVKAVLNGGAKKAKPLAQATYQKAKELMGLV 326


>gi|312880344|ref|ZP_07740144.1| SSU ribosomal protein S4P [Aminomonas paucivorans DSM 12260]
 gi|310783635|gb|EFQ24033.1| SSU ribosomal protein S4P [Aminomonas paucivorans DSM 12260]
          Length = 208

 Score = 37.1 bits (85), Expect = 5.3,   Method: Composition-based stats.
 Identities = 8/48 (16%), Positives = 18/48 (37%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
            ++ + G A S  +AR  ++     +N   +      ++  D  S   
Sbjct: 102 NVVYRLGLAVSRRQARELVRHGHFLVNGRKLDIPSAVLRAGDVVSVRE 149


>gi|269960771|ref|ZP_06175142.1| Tryptophanyl-tRNA synthetase [Vibrio harveyi 1DA3]
 gi|269834435|gb|EEZ88523.1| Tryptophanyl-tRNA synthetase [Vibrio harveyi 1DA3]
          Length = 340

 Score = 37.1 bits (85), Expect = 5.3,   Method: Composition-based stats.
 Identities = 37/218 (16%), Positives = 66/218 (30%), Gaps = 33/218 (15%)

Query: 45  TASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIE 104
           T   LH GH    +      +T H    L+     +  +            S  I   + 
Sbjct: 20  TGP-LHLGHYVGSLQQRVALQTQHDQTILVADMQGLTDNAH-----NPSKVSSNILNVVA 73

Query: 105 KIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK 164
               +          +T   + +    L  +          +  S+ R+    +V++ ++
Sbjct: 74  DYLAVG-----IDPIQTTICLQSQVPALAELTMY-----YSNLVSIARLERNPTVKNEIQ 123

Query: 165 R---EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE---RLKT 218
               E+S+      Y I QA D       +   L   G DQ   +    ++      L  
Sbjct: 124 SKGFERSIPAGFLTYPISQAADI----TGFHATLVPVGDDQLPMLEQTNEIVRKINHLGG 179

Query: 219 PKLFALTSPLLTT------ASGT-KMGKTLSGAIWLNK 249
             +     PLL+         G  KM K++  AI L  
Sbjct: 180 KTILKECRPLLSDAPRLPSTDGKNKMSKSMGNAINLGA 217


>gi|160939064|ref|ZP_02086415.1| hypothetical protein CLOBOL_03958 [Clostridium bolteae ATCC
           BAA-613]
 gi|158438027|gb|EDP15787.1| hypothetical protein CLOBOL_03958 [Clostridium bolteae ATCC
           BAA-613]
          Length = 389

 Score = 37.1 bits (85), Expect = 5.3,   Method: Composition-based stats.
 Identities = 43/258 (16%), Positives = 78/258 (30%), Gaps = 38/258 (14%)

Query: 23  NPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLF-WLQKTG-HKPISLMGGGTSI 80
           +  E+  +   G +    G   T   LH GH    +     LQ +G    I +M      
Sbjct: 16  DAEEMRGIYQMGKIIL-TGDRPTGR-LHVGHYAGSLKRRVELQNSGEFDEIYIMIADAQA 73

Query: 81  IGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDL 140
           + D +   E  R    +   + +                K+   + +    LC + +  +
Sbjct: 74  LTDNADNPEKVRQNIIEVALDYLACG---------LDPEKSVLFIQSQVPELCEMTFYYM 124

Query: 141 LREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGS 200
                S    N  +  E      +    + F  F Y I QA D           + +G  
Sbjct: 125 DLVTVSRLQRNPTVKSEIQMRNFEASIPVGF--FTYPISQAADITAFKA---TTVPVG-E 178

Query: 201 DQWGNIICGIDLGERLKTPKLFALT----SPLLTTA---------SGT-KMGKTLSGAIW 246
           DQ   I    ++  +  +  ++  T      LL             G  KM K+L   I+
Sbjct: 179 DQAPMIEQTREIVHKFNS--VYGDTLVEPDILLPDNKACLRLPGIDGKAKMSKSLGNCIY 236

Query: 247 LNKEMTSPYNFWQYWRNI 264
           L+          +   ++
Sbjct: 237 LSDSED---EIKKKIMSM 251


>gi|289641301|ref|ZP_06473467.1| pseudouridine synthase [Frankia symbiont of Datisca glomerata]
 gi|289508899|gb|EFD29832.1| pseudouridine synthase [Frankia symbiont of Datisca glomerata]
          Length = 248

 Score = 37.1 bits (85), Expect = 5.4,   Method: Composition-based stats.
 Identities = 10/79 (12%), Positives = 30/79 (37%), Gaps = 9/79 (11%)

Query: 342 SKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD---S 398
           + D  + G+ L  ++  AG   S   +   + +  ++++  ++  + +++  Q       
Sbjct: 3   AGDANAEGVRLQKVLAAAG-VGSRRHSEELIAAGRVRVDGRVVETQGMRVDPQTAIIEVD 61

Query: 399 TGNIKLSFGKKNHIICHLC 417
              +    G     + HL 
Sbjct: 62  GERVVTRAG-----LVHLA 75


>gi|302868886|ref|YP_003837523.1| 30S ribosomal protein S4 [Micromonospora aurantiaca ATCC 27029]
 gi|302571745|gb|ADL47947.1| ribosomal protein S4 [Micromonospora aurantiaca ATCC 27029]
          Length = 202

 Score = 37.1 bits (85), Expect = 5.4,   Method: Composition-based stats.
 Identities = 10/70 (14%), Positives = 25/70 (35%), Gaps = 8/70 (11%)

Query: 340 SISKDEVSRGMGLLTLI--------VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
             ++     G  L+ L+        ++AG A S  +AR+ +    I ++   +     ++
Sbjct: 73  EAARGAGKTGETLVALLERRLDAVVLRAGLARSVYQARQLVAHGHITVDGRKVDRPSYRL 132

Query: 392 KLQDFDSTGN 401
           +         
Sbjct: 133 RPGQVVGVRE 142


>gi|212704608|ref|ZP_03312736.1| hypothetical protein DESPIG_02670 [Desulfovibrio piger ATCC 29098]
 gi|212672007|gb|EEB32490.1| hypothetical protein DESPIG_02670 [Desulfovibrio piger ATCC 29098]
          Length = 208

 Score = 37.1 bits (85), Expect = 5.4,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 31/65 (47%), Gaps = 11/65 (16%)

Query: 342 SKDEVSRGMGLLTLIV-----------KAGFATSTNEARRHLKSNAIKINNSIISNEKLQ 390
            K E+ +G+    L+V           + GFA S N+AR+ ++     +N   ++   LQ
Sbjct: 79  EKAEMQKGVTGTNLLVILERRLDNVVYRLGFANSRNQARQLVRHGIFTLNGHKVTIPSLQ 138

Query: 391 IKLQD 395
           +++ D
Sbjct: 139 VRVGD 143


>gi|163758412|ref|ZP_02165500.1| putative ribosomal large subunit pseudouridine synthase B [Hoeflea
           phototrophica DFL-43]
 gi|162284701|gb|EDQ34984.1| putative ribosomal large subunit pseudouridine synthase B [Hoeflea
           phototrophica DFL-43]
          Length = 520

 Score = 37.1 bits (85), Expect = 5.4,   Method: Composition-based stats.
 Identities = 7/46 (15%), Positives = 20/46 (43%), Gaps = 1/46 (2%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
           +  ++ + G   S  +  R +    I++N  ++ +  + + L D  
Sbjct: 43  IAKILARVG-VASRRDVERMVAEGRIRVNGKLLDSPAVVVSLSDRI 87


>gi|156340515|ref|XP_001620471.1| hypothetical protein NEMVEDRAFT_v1g223077 [Nematostella vectensis]
 gi|156205434|gb|EDO28371.1| predicted protein [Nematostella vectensis]
          Length = 275

 Score = 37.1 bits (85), Expect = 5.4,   Method: Composition-based stats.
 Identities = 17/79 (21%), Positives = 33/79 (41%), Gaps = 1/79 (1%)

Query: 337 PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
           P  S  K     G+ L   I  +G   S  EA  ++ S  + +N  +I+    ++K  D 
Sbjct: 30  PQSSTKKSSPEDGIRLNKYIANSGVC-SRREADTYIASGNVVVNGKVITEMGFKVKPTDD 88

Query: 397 DSTGNIKLSFGKKNHIICH 415
                  +S  +K +++ +
Sbjct: 89  IRFDGTAISPEEKKYVLLN 107


>gi|124267222|ref|YP_001021226.1| putative arginine/proline rich protein [Methylibium petroleiphilum
           PM1]
 gi|124259997|gb|ABM94991.1| putative arginine/proline rich protein [Methylibium petroleiphilum
           PM1]
          Length = 421

 Score = 37.1 bits (85), Expect = 5.4,   Method: Composition-based stats.
 Identities = 5/39 (12%), Positives = 19/39 (48%), Gaps = 1/39 (2%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
           + + G A S  EA   ++   ++++  ++     +++ +
Sbjct: 176 MSELGLA-SRREADEWIEQGYVRVDGEVVDQLGARVRPE 213


>gi|37523141|ref|NP_926518.1| 30S ribosomal protein S4 [Gloeobacter violaceus PCC 7421]
 gi|41017822|sp|Q7NFF4|RS4_GLOVI RecName: Full=30S ribosomal protein S4
 gi|35214144|dbj|BAC91513.1| 30S ribosomal protein S4 [Gloeobacter violaceus PCC 7421]
          Length = 206

 Score = 37.1 bits (85), Expect = 5.4,   Method: Composition-based stats.
 Identities = 19/104 (18%), Positives = 36/104 (34%), Gaps = 16/104 (15%)

Query: 310 VHGR------EEAEKAATAAMECFDMSIHSQHMPTI--SISKDEVSRGMGLLTLI----- 356
           VHG+      E A +        +   +  +         S+   + G   L L+     
Sbjct: 42  VHGQARQKLSEYAIRLKEKQKARWSYGVLEKQFRRTFSDASRATGNTGAKFLELLERRLD 101

Query: 357 ---VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
               + GFATS  +AR+ +      +N   +S    +++  D  
Sbjct: 102 NVVYRLGFATSRAQARQWVNHGHFAVNGRRVSIPSYRVRPGDAI 145


>gi|28897870|ref|NP_797475.1| tryptophanyl-tRNA synthetase II [Vibrio parahaemolyticus RIMD
           2210633]
 gi|260361800|ref|ZP_05774825.1| tryptophan--tRNA ligase [Vibrio parahaemolyticus K5030]
 gi|260877029|ref|ZP_05889384.1| tryptophan--tRNA ligase [Vibrio parahaemolyticus AN-5034]
 gi|260895109|ref|ZP_05903605.1| tryptophan--tRNA ligase [Vibrio parahaemolyticus Peru-466]
 gi|28806083|dbj|BAC59359.1| putative tryptophanyl-tRNA synthetase [Vibrio parahaemolyticus RIMD
           2210633]
 gi|308089213|gb|EFO38908.1| tryptophan--tRNA ligase [Vibrio parahaemolyticus Peru-466]
 gi|308093812|gb|EFO43507.1| tryptophan--tRNA ligase [Vibrio parahaemolyticus AN-5034]
 gi|308113230|gb|EFO50770.1| tryptophan--tRNA ligase [Vibrio parahaemolyticus K5030]
          Length = 340

 Score = 37.1 bits (85), Expect = 5.4,   Method: Composition-based stats.
 Identities = 36/218 (16%), Positives = 67/218 (30%), Gaps = 33/218 (15%)

Query: 45  TASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIE 104
           T   LH GH    +      ++ H    L+     +  +            S  I   + 
Sbjct: 20  TGP-LHLGHYVGSLQQRVALQSEHDQTILVADMQGLTDNAH-----NPSKVSSNILNVVA 73

Query: 105 KIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK 164
               +          +T   + +    L  +          +  S+ R+    +V++ ++
Sbjct: 74  DYLAVG-----IDPIQTTICLQSQLPALAELTMY-----YSNLVSIARLERNPTVKNEIQ 123

Query: 165 R---EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE---RLKT 218
               E+S+      Y I QA D       +   L   G DQ   +    ++      L  
Sbjct: 124 SKGFERSIPAGFLTYPISQAADI----TGFRATLVPVGDDQLPMLEQTNEIVRKINHLGG 179

Query: 219 PKLFALTSPLLTT------ASGT-KMGKTLSGAIWLNK 249
            ++     PLL+         G  KM K++  AI L  
Sbjct: 180 QEILKECRPLLSDAPRLPSTDGKNKMSKSMGNAINLGA 217


>gi|323345230|ref|ZP_08085453.1| ribosomal large subunit pseudouridine synthase D [Prevotella oralis
           ATCC 33269]
 gi|323093344|gb|EFZ35922.1| ribosomal large subunit pseudouridine synthase D [Prevotella oralis
           ATCC 33269]
          Length = 299

 Score = 37.1 bits (85), Expect = 5.4,   Method: Composition-based stats.
 Identities = 11/65 (16%), Positives = 25/65 (38%), Gaps = 5/65 (7%)

Query: 346 VSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLS 405
           V +   LL  +     + S ++ +  LK   I++N   ++     +          + +S
Sbjct: 19  VEQEASLLDWLFATVKSASKSKVKATLKGRGIRVNGKTVTQFDFPL-----LPGMKVSVS 73

Query: 406 FGKKN 410
             K+N
Sbjct: 74  KSKRN 78


>gi|300312574|ref|YP_003776666.1| tryptophanyl-tRNA synthetase [Herbaspirillum seropedicae SmR1]
 gi|300075359|gb|ADJ64758.1| tryptophanyl-tRNA synthetase protein [Herbaspirillum seropedicae
           SmR1]
          Length = 399

 Score = 37.1 bits (85), Expect = 5.4,   Method: Composition-based stats.
 Identities = 25/132 (18%), Positives = 45/132 (34%), Gaps = 16/132 (12%)

Query: 133 CSIKYIDLLREIGSFFSVNRMLSFES------VRSRLKREQSLSFLEFNYMILQAYDFVE 186
             + +I+++REI   F+                  +L  +++  +LE      +  D   
Sbjct: 152 DQVPHIEIMREIARRFNHLYGKEKGFEEKALAATKKLGSKRARLYLELRTQFQEKGDDEA 211

Query: 187 LAKNYDC-----RLQMGGSDQWGNIICG-IDLGERLKTPKLFALT-SPLLTTASGTKMGK 239
           L +          L M   ++    + G   L     T     LT +  L    G KM K
Sbjct: 212 LEQAKAMLDDAQNLSMIDRERLFGYLEGSRKLI---LTEPQAMLTEASRLPGLDGAKMSK 268

Query: 240 TLSGAIWLNKEM 251
           +   AI L ++ 
Sbjct: 269 SYGNAIALREDK 280


>gi|261252238|ref|ZP_05944811.1| ribosomal large subunit pseudouridine synthase F [Vibrio orientalis
           CIP 102891]
 gi|260935629|gb|EEX91618.1| ribosomal large subunit pseudouridine synthase F [Vibrio orientalis
           CIP 102891]
          Length = 344

 Score = 37.1 bits (85), Expect = 5.4,   Method: Composition-based stats.
 Identities = 9/30 (30%), Positives = 14/30 (46%), Gaps = 1/30 (3%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSI 383
             I + GF  S  EA R ++   + IN  +
Sbjct: 11  KFISETGFC-SRREADRLIEQGRVTINGQV 39


>gi|220903959|ref|YP_002479271.1| 30S ribosomal protein S4 [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
 gi|254764584|sp|B8IYL6|RS4_DESDA RecName: Full=30S ribosomal protein S4
 gi|219868258|gb|ACL48593.1| ribosomal protein S4 [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
          Length = 208

 Score = 37.1 bits (85), Expect = 5.4,   Method: Composition-based stats.
 Identities = 22/112 (19%), Positives = 45/112 (40%), Gaps = 3/112 (2%)

Query: 285 DRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHM-PTISISK 343
           DR     G+     KK+  +E    +  +++  +        F        M   ++ + 
Sbjct: 34  DRRPYAPGQHGRARKKV--SEYAVQLREKQKTRRIYGILERQFHGYFVKADMQKGVTGTN 91

Query: 344 DEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
             V     L  ++ + GFA S N+AR+ ++     +N   ++   LQ++L D
Sbjct: 92  LLVILERRLDNVVYRLGFANSRNQARQLVRHGVFTLNGRKVNIPSLQVRLGD 143


>gi|121602260|ref|YP_989607.1| lysyl-tRNA synthetase [Bartonella bacilliformis KC583]
 gi|120614437|gb|ABM45038.1| lysyl-tRNA synthetase [Bartonella bacilliformis KC583]
          Length = 553

 Score = 37.1 bits (85), Expect = 5.4,   Method: Composition-based stats.
 Identities = 13/83 (15%), Positives = 25/83 (30%), Gaps = 4/83 (4%)

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           D+    K      +M G D   ++     + + L +         L     G K+ K+  
Sbjct: 251 DWAMRWKALGVDYEMAGKDLIDSVNLSSKICKVLGSNPPEGFNYELFLDEKGQKISKSKG 310

Query: 243 GAI----WLNKEMTSPYNFWQYW 261
             +    WL    T     + + 
Sbjct: 311 NGLTIDEWLTYAPTESLGLYMFL 333


>gi|303327556|ref|ZP_07357997.1| tryptophan--tRNA ligase [Desulfovibrio sp. 3_1_syn3]
 gi|302862496|gb|EFL85429.1| tryptophan--tRNA ligase [Desulfovibrio sp. 3_1_syn3]
          Length = 377

 Score = 37.1 bits (85), Expect = 5.4,   Method: Composition-based stats.
 Identities = 41/235 (17%), Positives = 68/235 (28%), Gaps = 33/235 (14%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTG-HKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQE 101
            T   LH GH    +     LQ +G    I +M      + D +   E  R    +   +
Sbjct: 24  PTGR-LHIGHYVGSLKRRVELQNSGEFDEIYIMIADAQALTDNADNPEKVRQNIIEVALD 82

Query: 102 NIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRS 161
            +                K+   + +    LC + +  +     S    N  +  E    
Sbjct: 83  YLACG---------LDPEKSVLFIQSQVPELCEMAFYYMDLVTVSRLQRNPTVKSEIQLR 133

Query: 162 RLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQ------------WGNIICG 209
             +    + F  F Y I QA D           + +G  DQ              N + G
Sbjct: 134 NFETSLPVGF--FTYPISQAADITAFKA---TTVPVG-EDQAPMIEQTKEIVHKFNAVYG 187

Query: 210 IDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNI 264
             L E             L  T    KM K+L   I+L+       +  +   ++
Sbjct: 188 ETLVEPTILLPDNEACLRLPGTDGKAKMSKSLGNCIYLSDSE---EDVKKKIMSM 239


>gi|225028080|ref|ZP_03717272.1| hypothetical protein EUBHAL_02350 [Eubacterium hallii DSM 3353]
 gi|224954550|gb|EEG35759.1| hypothetical protein EUBHAL_02350 [Eubacterium hallii DSM 3353]
          Length = 242

 Score = 37.1 bits (85), Expect = 5.4,   Method: Composition-based stats.
 Identities = 5/41 (12%), Positives = 22/41 (53%), Gaps = 1/41 (2%)

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQD-FDSTGNIK 403
           + +EA++ +K  ++ ++  ++   ++++  +D     G + 
Sbjct: 21  TRSEAKQKIKKGSVTVDGEVVKKAEMKVSSEDAICLDGEVV 61


>gi|171464311|ref|YP_001798424.1| RNA-binding S4 domain protein [Polynucleobacter necessarius subsp.
           necessarius STIR1]
 gi|171193849|gb|ACB44810.1| RNA-binding S4 domain protein [Polynucleobacter necessarius subsp.
           necessarius STIR1]
          Length = 245

 Score = 37.1 bits (85), Expect = 5.4,   Method: Composition-based stats.
 Identities = 6/39 (15%), Positives = 18/39 (46%), Gaps = 1/39 (2%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIIS 385
              + +  L+ + G   S  EA  +++   + I+  +++
Sbjct: 2   EEKVRVSKLLSELGLC-SRREADSYIEQGLVTIDGEVVN 39


>gi|157693366|ref|YP_001487828.1| 30S ribosomal protein S4 [Bacillus pumilus SAFR-032]
 gi|172046056|sp|A8FGA1|RS4_BACP2 RecName: Full=30S ribosomal protein S4
 gi|157682124|gb|ABV63268.1| ribosomal protein S4 [Bacillus pumilus SAFR-032]
          Length = 200

 Score = 37.1 bits (85), Expect = 5.4,   Method: Composition-based stats.
 Identities = 12/82 (14%), Positives = 26/82 (31%), Gaps = 3/82 (3%)

Query: 320 ATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKI 379
                  FD +     +P        +     L  L+ + G A +  +AR+ +    I +
Sbjct: 65  ERQFRTLFDKAAK---LPGKQGENFMILLETRLDNLVYRLGLARTRRQARQLVNHGHILV 121

Query: 380 NNSIISNEKLQIKLQDFDSTGN 401
           + S +      +K     +   
Sbjct: 122 DGSRVDIPSFSVKPGQTIALRE 143


>gi|159899308|ref|YP_001545555.1| aliphatic sulfonate ABC transporter periplasmic ligand-binding
           protein [Herpetosiphon aurantiacus ATCC 23779]
 gi|159892347|gb|ABX05427.1| aliphatic sulfonates family ABC transporter, periplsmic
           ligand-binding protein [Herpetosiphon aurantiacus ATCC
           23779]
          Length = 330

 Score = 37.1 bits (85), Expect = 5.4,   Method: Composition-based stats.
 Identities = 17/92 (18%), Positives = 31/92 (33%), Gaps = 17/92 (18%)

Query: 280 PMSEIDRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTI 339
            + EI ++ +   +E     KI+A      V G + A     A  + F +S  +  +   
Sbjct: 241 TLEEIQKVEQWSAQEPQAVAKILAP-----VIGVDAAILEEVAKKQAFGLSPINDAI--- 292

Query: 340 SISKDEVSRGMGLLTLIVKAGFAT---STNEA 368
                 V+    +     + G      S  EA
Sbjct: 293 ------VNEQQQIADTFFELGLIPKKVSIREA 318


>gi|50842085|ref|YP_055312.1| hypothetical protein PPA0599 [Propionibacterium acnes KPA171202]
 gi|50839687|gb|AAT82354.1| conserved protein [Propionibacterium acnes KPA171202]
          Length = 76

 Score = 37.1 bits (85), Expect = 5.4,   Method: Composition-based stats.
 Identities = 9/46 (19%), Positives = 19/46 (41%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           + L   +  A  A +  +AR  + S  + +N  + +    Q+   D
Sbjct: 7   IRLGQYLKFANLAETGGQARELIASGMVSVNGKVETRRGRQLHPGD 52


>gi|311087422|gb|ADP67502.1| tryptophanyl-tRNA synthetase [Buchnera aphidicola str. JF99
           (Acyrthosiphon pisum)]
          Length = 335

 Score = 37.1 bits (85), Expect = 5.5,   Method: Composition-based stats.
 Identities = 23/116 (19%), Positives = 43/116 (37%), Gaps = 18/116 (15%)

Query: 149 SVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIIC 208
             + +L     + +    + ++   FNY IL A D + L +     +   G DQ  ++  
Sbjct: 102 QFSELLRMTQFKIKSNCSKKINAALFNYPILMAADIL-LYQTNFVPV---GQDQKQHVEL 157

Query: 209 GIDLGERLKT--PKLFALTSPLLTTAS---------GTKMGKT---LSGAIWLNKE 250
             ++  R  +    +F L  PL+T              KM K+       I+L  +
Sbjct: 158 TRNIAHRFNSLYGHVFTLPKPLITQHGSKIMSLLEPNKKMSKSDINKKNVIFLLDD 213


>gi|282908290|ref|ZP_06316121.1| tryptophanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282327955|gb|EFB58237.1| tryptophanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WW2703/97]
          Length = 327

 Score = 37.1 bits (85), Expect = 5.5,   Method: Composition-based stats.
 Identities = 38/198 (19%), Positives = 69/198 (34%), Gaps = 35/198 (17%)

Query: 140 LLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGG 199
           +L  I S   + RM  ++    +         L   Y  L A D V     Y+  +   G
Sbjct: 92  MLTTIASVGELERMTQYKDKAQKAVEGIPAGLL--TYPPLMAADIVL----YNTNIVPVG 145

Query: 200 SDQWGNIICGIDLGERLKTPKLFALTSPLL--TTASGT---------KMGKTLSGAIWLN 248
            DQ  +I    +L +R  +     L  P +      G          KM K+   A    
Sbjct: 146 DDQKQHIELTRNLVDRFNSRYNDVLVKPEIRMPKVGGRVMSLQDPTRKMSKSDDNAKNFI 205

Query: 249 KEMTSPYNFWQYWRN-IDDAD---------------VVSFAKRLTTLPMSEIDRMAKLQG 292
             +  P    +  ++ + D+D               ++S    LT +P+ +I+  AK +G
Sbjct: 206 SLLDEPNVAAKKIKSAVTDSDGIIKFDRDNKPGITNLISIYAGLTDMPIKDIE--AKYEG 263

Query: 293 KEINEAKKIIATEITTMV 310
           +   + K  +A  +   +
Sbjct: 264 EGYGKFKGDLAEIVKAFL 281


>gi|167957353|ref|ZP_02544427.1| isoleucyl-tRNA synthetase [candidate division TM7 single-cell
           isolate TM7c]
          Length = 418

 Score = 37.1 bits (85), Expect = 5.5,   Method: Composition-based stats.
 Identities = 16/81 (19%), Positives = 28/81 (34%), Gaps = 14/81 (17%)

Query: 223 ALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMS 282
            +T+ ++    G KM K+L          T P      +     AD + F    + L   
Sbjct: 29  VITTGVVAGNDGRKMSKSLGNF-------TDPNELMDKFS----ADSLRFLLLSSPLLNG 77

Query: 283 EIDRMAKLQGKEINEAKKIIA 303
           E      L  K + +  + +A
Sbjct: 78  E---DFALHDKSVGDVARKLA 95


>gi|154287040|ref|XP_001544315.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
 gi|150407956|gb|EDN03497.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
          Length = 453

 Score = 37.1 bits (85), Expect = 5.5,   Method: Composition-based stats.
 Identities = 12/60 (20%), Positives = 28/60 (46%), Gaps = 2/60 (3%)

Query: 337 PTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
           P + ++   + R + +   I +A FA+ST +AR+ +   ++ +N   +      +   D 
Sbjct: 153 PHMQMTFAPLERRLDVA--IFRAMFASSTRQARQFVIHGSVTVNGKKMRYPGYLLNSGDL 210


>gi|322707045|gb|EFY98624.1| tryptophanyl-tRNA synthetase [Metarhizium anisopliae ARSEF 23]
          Length = 491

 Score = 37.1 bits (85), Expect = 5.5,   Method: Composition-based stats.
 Identities = 13/51 (25%), Positives = 18/51 (35%), Gaps = 1/51 (1%)

Query: 15  RGFIHQISNPR-ELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           RG      +    LD          Y G   ++ S+H GH      + WLQ
Sbjct: 86  RGIFFSHRDLHMILDRYEKNEPFFLYTGRGPSSDSMHIGHTQVFDFVKWLQ 136


>gi|322695971|gb|EFY87770.1| tryptophanyl-tRNA synthetase [Metarhizium acridum CQMa 102]
          Length = 489

 Score = 37.1 bits (85), Expect = 5.5,   Method: Composition-based stats.
 Identities = 13/51 (25%), Positives = 18/51 (35%), Gaps = 1/51 (1%)

Query: 15  RGFIHQISNPR-ELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQ 64
           RG      +    LD          Y G   ++ S+H GH      + WLQ
Sbjct: 83  RGIFFSHRDLHMILDRYEKNEPFFLYTGRGPSSDSMHIGHTQVFDFVKWLQ 133


>gi|319399680|gb|EFV87933.1| tryptophanyl-tRNA synthetase [Staphylococcus epidermidis FRI909]
          Length = 335

 Score = 37.1 bits (85), Expect = 5.5,   Method: Composition-based stats.
 Identities = 36/233 (15%), Positives = 67/233 (28%), Gaps = 32/233 (13%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
            T   LH GH    +      +       ++    ++  +    ++ R  +    +    
Sbjct: 12  PTGK-LHIGHYIGSLKKRVELQDQFNSFIMIADQQALTDNARNPEKIRNSLTEVVLDYLS 70

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL 163
             I             K++  + +    L  +    L     S    N  +  E    + 
Sbjct: 71  VGI----------DPLKSNIFVQSQIPELNELTMHYLNLVTLSRLKRNPTVKNEMKEKKF 120

Query: 164 KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER----LKTP 219
                  FL   Y I Q  D       +   +   G DQ   I    ++ +         
Sbjct: 121 GERVPAGFL--IYPISQTADITA----FKTSVVPVGEDQIPMIEQANEIVKTFNTTYNQN 174

Query: 220 KLFALTSPL-------LTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNI 264
            L+   + L       L    G  KM K+L  AI+L+    SP    +   ++
Sbjct: 175 ILYKSKALLPRKGLGRLPGTDGKAKMSKSLDNAIYLS---DSPDTIRKKIMSM 224


>gi|301156469|emb|CBW15940.1| 16S rRNA pseudouridylate 516 synthase [Haemophilus parainfluenzae
           T3T1]
          Length = 232

 Score = 37.1 bits (85), Expect = 5.5,   Method: Composition-based stats.
 Identities = 10/37 (27%), Positives = 21/37 (56%), Gaps = 2/37 (5%)

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
            G     ++A + ++ +A+KIN  I+ N   ++ L+D
Sbjct: 11  TGLT--RSQATKAIRQSAVKINGEIVKNGATKVSLED 45


>gi|225461477|ref|XP_002282453.1| PREDICTED: hypothetical protein [Vitis vinifera]
 gi|302142996|emb|CBI20291.3| unnamed protein product [Vitis vinifera]
          Length = 321

 Score = 37.1 bits (85), Expect = 5.5,   Method: Composition-based stats.
 Identities = 14/70 (20%), Positives = 29/70 (41%), Gaps = 6/70 (8%)

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS-TGNIKLSFG---- 407
           +  +  AGF  S ++    + +  +++N + ++     +K  D  S +G  +L  G    
Sbjct: 248 VDALASAGFKLSRSKLVDLISNGDVRVNWTTVTKNGTTLKTGDVVSVSGKGRLKIGEINS 307

Query: 408 -KKNHIICHL 416
            KK      L
Sbjct: 308 TKKGKYAVEL 317


>gi|217032313|ref|ZP_03437809.1| hypothetical protein HPB128_132g11 [Helicobacter pylori B128]
 gi|298735723|ref|YP_003728248.1| tryptophanyl-tRNA synthetase [Helicobacter pylori B8]
 gi|216945979|gb|EEC24593.1| hypothetical protein HPB128_132g11 [Helicobacter pylori B128]
 gi|298354912|emb|CBI65784.1| tryptophanyl-tRNA synthetase [Helicobacter pylori B8]
          Length = 326

 Score = 37.1 bits (85), Expect = 5.5,   Method: Composition-based stats.
 Identities = 36/188 (19%), Positives = 62/188 (32%), Gaps = 39/188 (20%)

Query: 147 FFSVNRMLSFESVR-SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGN 205
             S+  M      +   LK  +S++   FNY IL A D +     Y   L   G DQ  +
Sbjct: 98  QVSMGEMQRMTQFKDKSLKNPKSVNVGLFNYPILMASDILL----YQSDLVPVGEDQKQH 153

Query: 206 IICGIDLGERLKT--PKLFALTSPLLTTASG---------TKMGKTLSG---AIWLNKEM 251
           +    ++ E+        F +  PL+               KM K+  G   AI+L   +
Sbjct: 154 LELTRNIAEKFNRDFGSCFKVPEPLIAKVGARVMGLDDPKVKMSKSYQGANHAIFL---L 210

Query: 252 TSPYNFWQYWRNIDDADV---------------VSFAKRLTTLPMSEIDRMAKLQGKEIN 296
             P    +  +      +               ++    L+      I+   K +G    
Sbjct: 211 DEPDIIVRKIKKAATDSMGVIAFDEKREGIFNLLNIYMLLSNESPENIEERFKNKG--YG 268

Query: 297 EAKKIIAT 304
           + KK +A 
Sbjct: 269 DFKKELAE 276


>gi|153839241|ref|ZP_01991908.1| tryptophanyl-tRNA synthetase [Vibrio parahaemolyticus AQ3810]
 gi|149747236|gb|EDM58224.1| tryptophanyl-tRNA synthetase [Vibrio parahaemolyticus AQ3810]
 gi|328473169|gb|EGF44017.1| tryptophanyl-tRNA synthetase II [Vibrio parahaemolyticus 10329]
          Length = 340

 Score = 37.1 bits (85), Expect = 5.5,   Method: Composition-based stats.
 Identities = 36/218 (16%), Positives = 67/218 (30%), Gaps = 33/218 (15%)

Query: 45  TASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIE 104
           T   LH GH    +      ++ H    L+     +  +            S  I   + 
Sbjct: 20  TGP-LHLGHYVGSLQQRVALQSEHDQTILVADMQGLTDNAH-----NPSKVSSNILNVVA 73

Query: 105 KIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK 164
               +          +T   + +    L  +          +  S+ R+    +V++ ++
Sbjct: 74  DYLAVG-----IDPIQTTICLQSQLPALAELTMY-----YSNLVSIARLERNPTVKNEIQ 123

Query: 165 R---EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE---RLKT 218
               E+S+      Y I QA D       +   L   G DQ   +    ++      L  
Sbjct: 124 SKGFERSIPAGFLTYPISQAADI----TGFRATLVPVGDDQLPMLEQTNEIVRKINHLGG 179

Query: 219 PKLFALTSPLLTT------ASGT-KMGKTLSGAIWLNK 249
            ++     PLL+         G  KM K++  AI L  
Sbjct: 180 QEILKECRPLLSDAPRLPSTDGKNKMSKSMGNAINLGA 217


>gi|94499270|ref|ZP_01305808.1| hypothetical protein RED65_10789 [Oceanobacter sp. RED65]
 gi|94428902|gb|EAT13874.1| hypothetical protein RED65_10789 [Oceanobacter sp. RED65]
          Length = 70

 Score = 37.1 bits (85), Expect = 5.5,   Method: Composition-based stats.
 Identities = 8/60 (13%), Positives = 24/60 (40%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
              + L  ++   G   S  +A+  +    + +N  + + ++ +I   D     +I++  
Sbjct: 8   EEPVELYKILKFEGIVESGGQAKAVIDDGLVSVNGEVETRKRKKIVSGDVIKYTDIEVKV 67


>gi|58698334|ref|ZP_00373250.1| lysyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           ananassae]
 gi|225630564|ref|YP_002727355.1| lysyl-tRNA synthetase [Wolbachia sp. wRi]
 gi|58535158|gb|EAL59241.1| lysyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           ananassae]
 gi|225592545|gb|ACN95564.1| lysyl-tRNA synthetase [Wolbachia sp. wRi]
          Length = 511

 Score = 37.1 bits (85), Expect = 5.5,   Method: Composition-based stats.
 Identities = 13/83 (15%), Positives = 23/83 (27%), Gaps = 4/83 (4%)

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            D+      +    +  G D   + +    + E L           L     G K+ K+ 
Sbjct: 223 PDWGMRWAAFGVNYEAHGKDLTPSAVLSSQICEILGEKPPLLFCYELFLDKEGKKISKSK 282

Query: 242 SGAI----WLNKEMTSPYNFWQY 260
              I    WL    T     + +
Sbjct: 283 GNGISIEEWLTYAPTESLALYIF 305


>gi|325918894|ref|ZP_08180968.1| hypothetical protein XVE_5006 [Xanthomonas vesicatoria ATCC 35937]
 gi|325534880|gb|EGD06802.1| hypothetical protein XVE_5006 [Xanthomonas vesicatoria ATCC 35937]
          Length = 80

 Score = 37.1 bits (85), Expect = 5.6,   Method: Composition-based stats.
 Identities = 10/66 (15%), Positives = 25/66 (37%)

Query: 341 ISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG 400
           +  D     + L  L+  AG A S  + +  + S A+ ++      +  +I+        
Sbjct: 4   LEFDLDGEYIELNQLLKLAGIADSGGQGKAIVASGAVSVDGVQELRKTAKIRPGQLVQLD 63

Query: 401 NIKLSF 406
            +++  
Sbjct: 64  EVEIRV 69


>gi|311069499|ref|YP_003974422.1| putative 16S pseudouridylate synthase [Bacillus atrophaeus 1942]
 gi|310870016|gb|ADP33491.1| putative 16S pseudouridylate synthase [Bacillus atrophaeus 1942]
          Length = 239

 Score = 37.1 bits (85), Expect = 5.6,   Method: Composition-based stats.
 Identities = 11/52 (21%), Positives = 23/52 (44%), Gaps = 1/52 (1%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
           M L  L+  +G   S  E ++ +K+ A+ I+     + K  +   + + T  
Sbjct: 1   MRLDKLLANSGI-GSRKEVKKIVKAGAVSIDGKQAKDVKTHVDPSEHEVTVY 51


>gi|269926072|ref|YP_003322695.1| hemolysin A [Thermobaculum terrenum ATCC BAA-798]
 gi|269789732|gb|ACZ41873.1| hemolysin A [Thermobaculum terrenum ATCC BAA-798]
          Length = 277

 Score = 37.1 bits (85), Expect = 5.6,   Method: Composition-based stats.
 Identities = 9/37 (24%), Positives = 18/37 (48%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSI 383
              + L  L+V+ G A+S  +A+  + S  + +N   
Sbjct: 7   QDSIRLDKLMVELGLASSREKAQALISSGLVTVNGEK 43


>gi|217033574|ref|ZP_03439002.1| hypothetical protein HP9810_899g10 [Helicobacter pylori 98-10]
 gi|216943920|gb|EEC23354.1| hypothetical protein HP9810_899g10 [Helicobacter pylori 98-10]
          Length = 326

 Score = 37.1 bits (85), Expect = 5.6,   Method: Composition-based stats.
 Identities = 52/301 (17%), Positives = 91/301 (30%), Gaps = 58/301 (19%)

Query: 35  VVTAYIGYDLTASSLHAGHLTQLMLLFWLQKT-----GHKPISLMGGGTSIIGDPSFRDE 89
               + G   T   +H G+    +      +          +  +   T  I DP+F   
Sbjct: 3   KKRVFSGIQPTGQ-IHLGNYLGAIK--HWVEAQDEYENLFCVVNLHAITLPI-DPAFLKS 58

Query: 90  SRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFS 149
               +    +   I   +       +       A +LN     C +   ++         
Sbjct: 59  QSYELVKLLLACGINPKQSGLFIQSEIDEHPALAWLLN-----CQVSMGEM--------- 104

Query: 150 VNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICG 209
             RM  F+     LK  +S++   FNY IL A D +     Y   L   G DQ  ++   
Sbjct: 105 -QRMTQFKD--KSLKNPKSVNVGLFNYPILMASDILL----YQSDLVPVGEDQKQHLELT 157

Query: 210 IDLGERLKT--PKLFALTSPLLTTASG---------TKMGKTLSG---AIWLNKEMTSPY 255
            ++ E+        F +  PL+               KM K+  G   AI+L  E     
Sbjct: 158 RNIAEKFNRDFGNCFKVPEPLIAKVGARVMGLDDPKVKMSKSHQGANHAIFLLDEPDIIV 217

Query: 256 NFWQYWRNID------DAD------VVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIA 303
              +            D        +++    L+      I+   K +G    + KK +A
Sbjct: 218 RKIKKAATDSIGVIAFDEKREGVFNLLNIYMLLSNESPENIEERFKNKG--YGDFKKELA 275

Query: 304 T 304
            
Sbjct: 276 E 276


>gi|71065415|ref|YP_264142.1| 23S rRNA pseudouridine synthase F [Psychrobacter arcticus 273-4]
 gi|71038400|gb|AAZ18708.1| ribosomal large subunit pseudouridine synthase F [Psychrobacter
           arcticus 273-4]
          Length = 332

 Score = 37.1 bits (85), Expect = 5.6,   Method: Composition-based stats.
 Identities = 7/48 (14%), Positives = 17/48 (35%), Gaps = 1/48 (2%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
           I ++G   S  +A R ++   + +N    +     +        G + 
Sbjct: 13  ISESGIC-SRRDADRFIEQGNVYLNGKRAAVGDQVVAGDTVKVNGQLI 59


>gi|88801341|ref|ZP_01116869.1| putative ribosomal large subunit pseudouridine synthase
           [Polaribacter irgensii 23-P]
 gi|88781999|gb|EAR13176.1| putative ribosomal large subunit pseudouridine synthase
           [Polaribacter irgensii 23-P]
          Length = 305

 Score = 37.1 bits (85), Expect = 5.6,   Method: Composition-based stats.
 Identities = 17/77 (22%), Positives = 37/77 (48%), Gaps = 7/77 (9%)

Query: 342 SKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD---FDS 398
            K + S G+ L   I  +G   S  EA  +++  ++++N ++++    +++  D   FD 
Sbjct: 64  PKSDESTGIRLNKYIANSGVC-SRREADTYIEHGSVEVNGNLVTEMGYKVQPDDVVRFDG 122

Query: 399 TGNIKLSFGKKNHIICH 415
           TG        K +I+ +
Sbjct: 123 TGITPEQ---KKYILLN 136


>gi|329851127|ref|ZP_08265884.1| S4 domain protein [Asticcacaulis biprosthecum C19]
 gi|328839973|gb|EGF89545.1| S4 domain protein [Asticcacaulis biprosthecum C19]
          Length = 760

 Score = 37.1 bits (85), Expect = 5.6,   Method: Composition-based stats.
 Identities = 12/57 (21%), Positives = 23/57 (40%), Gaps = 3/57 (5%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGK 408
           +  ++ +AG A S  E  R +    I +N  I+    + +   D  +     +  GK
Sbjct: 55  IAKVLARAGLA-SRREVERLIGLGKIAVNGRILETPAVLVSSADIITVEGQVI--GK 108


>gi|296269471|ref|YP_003652103.1| pseudouridine synthase [Thermobispora bispora DSM 43833]
 gi|296092258|gb|ADG88210.1| pseudouridine synthase [Thermobispora bispora DSM 43833]
          Length = 426

 Score = 37.1 bits (85), Expect = 5.6,   Method: Composition-based stats.
 Identities = 7/40 (17%), Positives = 16/40 (40%), Gaps = 1/40 (2%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSII 384
           EV  G  L  ++ +AG   S       +    + ++  ++
Sbjct: 184 EVPGGERLQKVLARAG-VASRRACEELIGQGRVTVDGQVV 222


>gi|227505353|ref|ZP_03935402.1| tryptophanyl-tRNA synthetase [Corynebacterium striatum ATCC 6940]
 gi|227198055|gb|EEI78103.1| tryptophanyl-tRNA synthetase [Corynebacterium striatum ATCC 6940]
          Length = 339

 Score = 37.1 bits (85), Expect = 5.6,   Method: Composition-based stats.
 Identities = 33/228 (14%), Positives = 71/228 (31%), Gaps = 35/228 (15%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   TA S H G+    +  +   +  +     +    +I                +E++
Sbjct: 12  GIQPTADSYHLGNYLGALKQWIDLQNDYDAFYFIPDLHAIT----------VEQNPEELR 61

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLS-FESV 159
                      +       K+   + ++      + +  +L+ +  F   +RM    +  
Sbjct: 62  NRTVAGAAQLIALG-IDPEKSTLFVQSHVPAHTELTW--VLQCLTGFGEASRMTQFKDKS 118

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             +     ++    F Y +L A D + L       +   G DQ  ++    +L ER    
Sbjct: 119 AKQGTDRTTVGL--FTYPVLMAADIL-LYSPNYVPV---GEDQRQHLELTRNLAERFNNK 172

Query: 220 --KLFALTSPLLTTASGT---------KMGKTLSGAIW----LNKEMT 252
             + F +  P +   S           KM K+ +        L++  T
Sbjct: 173 YGETFRVPEPFIPEDSAKIYDLQEPTAKMSKSGANPKGIINLLDESKT 220


>gi|144901004|emb|CAM77868.1| Lysyl-tRNA synthetase [Magnetospirillum gryphiswaldense MSR-1]
          Length = 533

 Score = 37.1 bits (85), Expect = 5.6,   Method: Composition-based stats.
 Identities = 13/84 (15%), Positives = 24/84 (28%), Gaps = 6/84 (7%)

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           D+           +M G D   ++     +   +       LT  L     G K+ K+  
Sbjct: 244 DWAMRWYALGVDYEMSGKDLIPSVELSGRICRNIGGTPPLNLTYELFLDDQGQKISKSKG 303

Query: 243 GAI----WL--NKEMTSPYNFWQY 260
             +    WL      +     +Q 
Sbjct: 304 NGLAVEDWLKYAPPESLALFMYQK 327


>gi|67906490|gb|AAY82597.1| predicted leucyl-tRNA synthetase LeuS [uncultured bacterium
           MedeBAC35C06]
          Length = 804

 Score = 37.1 bits (85), Expect = 5.6,   Method: Composition-based stats.
 Identities = 24/137 (17%), Positives = 40/137 (29%), Gaps = 20/137 (14%)

Query: 210 IDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI----WLNKEMTSPYNFWQYW---- 261
            DLG          L +  +    G KM K+    +    +++K        +  +    
Sbjct: 537 RDLGLVDGDEPFKKLLTQGMVLKDGAKMSKSKGNTVDPQSFIDKYGADTIRLYMMFTAPP 596

Query: 262 ---RNIDDADVV---SFAKRLTT----LPMSEIDRMAK--LQGKEINEAKKIIATEITTM 309
                  D  V     F KRL      L   +I        + KE+     +   ++T  
Sbjct: 597 EQSLEWSDKSVEGASRFLKRLWNLCDGLKYEDIPEPKNFSQEEKELRNKTHLTIKKVTDD 656

Query: 310 VHGREEAEKAATAAMEC 326
              R     A  + ME 
Sbjct: 657 FETRYAFNTAIASIMEL 673


>gi|42520695|ref|NP_966610.1| lysyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           melanogaster]
 gi|99036094|ref|ZP_01315127.1| hypothetical protein Wendoof_01000017 [Wolbachia endosymbiont of
           Drosophila willistoni TSC#14030-0811.24]
 gi|42410435|gb|AAS14544.1| lysyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           melanogaster]
          Length = 511

 Score = 37.1 bits (85), Expect = 5.6,   Method: Composition-based stats.
 Identities = 13/83 (15%), Positives = 23/83 (27%), Gaps = 4/83 (4%)

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            D+      +    +  G D   + +    + E L           L     G K+ K+ 
Sbjct: 223 PDWGMRWAAFGVNYEAHGKDLTPSAVLSSQICEILGEKPPLLFCYELFLDKEGKKISKSK 282

Query: 242 SGAI----WLNKEMTSPYNFWQY 260
              I    WL    T     + +
Sbjct: 283 GNGISIEEWLTYAPTESLALYIF 305


>gi|328472213|gb|EGF43084.1| tryptophanyl-tRNA synthetase [Listeria monocytogenes 220]
          Length = 292

 Score = 37.1 bits (85), Expect = 5.7,   Method: Composition-based stats.
 Identities = 34/204 (16%), Positives = 60/204 (29%), Gaps = 45/204 (22%)

Query: 143 EIGSFFSVNRMLSFES----------VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYD 192
           E+ +      +L               + +   +  +S     Y  L A D +     Y 
Sbjct: 60  EVAAHAQAAWILQCNVYIGELERMTQFKDKSDGKAGVSAGLLTYPPLMAADILL----YQ 115

Query: 193 CRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-----------TKMGKT- 240
             L   G DQ  +I    DL ER         T P +                 KM K+ 
Sbjct: 116 TDLVPVGEDQKQHIELTRDLAERFNKKHADIFTMPEVFIPKQGARVMSLQDPTKKMSKSD 175

Query: 241 --LSGAIWLNKEMTSPYNFWQYWRN-IDDAD------------VVSFAKRLTTLPMSEID 285
             L  AI+L   +  P    +  ++ + D+             V +     + +    I 
Sbjct: 176 ANLKNAIFL---LDPPATIRKKIKSAVTDSSGIIEYNKEEKPGVSNLLTIYSVITGETIS 232

Query: 286 RMAKL-QGKEINEAKKIIATEITT 308
            + +   GK   + K  +A  +  
Sbjct: 233 TIEEKYVGKGYGDFKTDLAELVVA 256


>gi|330813627|ref|YP_004357866.1| ribosomal large subunit pseudouridine synthase B [Candidatus
           Pelagibacter sp. IMCC9063]
 gi|327486722|gb|AEA81127.1| ribosomal large subunit pseudouridine synthase B [Candidatus
           Pelagibacter sp. IMCC9063]
          Length = 246

 Score = 37.1 bits (85), Expect = 5.7,   Method: Composition-based stats.
 Identities = 11/63 (17%), Positives = 23/63 (36%), Gaps = 2/63 (3%)

Query: 343 KDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS-TGN 401
           K E+   + +   +       S  E  R +++  I +N  I++     +   D     G 
Sbjct: 2   KKELPEKVRISKFLASYN-VGSRREIERMIENGRIYLNGEILTTPVHFVNKTDSIKLDGK 60

Query: 402 IKL 404
           + L
Sbjct: 61  LLL 63


>gi|319406421|emb|CBI80061.1| lysyl-tRNA synthetase [Bartonella sp. 1-1C]
          Length = 552

 Score = 37.1 bits (85), Expect = 5.7,   Method: Composition-based stats.
 Identities = 12/83 (14%), Positives = 22/83 (26%), Gaps = 4/83 (4%)

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           D+           +M G D   +      + + L           L     G K+ K+  
Sbjct: 250 DWAMRWTALGIDYEMAGKDLIDSTNLSSKICKILGGKPPEGFNYELFLDDKGQKISKSKG 309

Query: 243 GAI----WLNKEMTSPYNFWQYW 261
             +    WL    T     + + 
Sbjct: 310 NGLTIDEWLTYAPTESLGLYMFL 332


>gi|317013040|gb|ADU83648.1| tryptophanyl-tRNA synthetase [Helicobacter pylori Lithuania75]
          Length = 326

 Score = 37.1 bits (85), Expect = 5.7,   Method: Composition-based stats.
 Identities = 41/238 (17%), Positives = 80/238 (33%), Gaps = 40/238 (16%)

Query: 147 FFSVNRMLSFESVR-SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGN 205
             S+  M      +   LK  +S++   FNY IL A D +     Y   L   G DQ  +
Sbjct: 98  QVSMGEMQRMTQFKDKSLKNPKSVNVGLFNYPILMASDILL----YQSDLVPVGEDQKQH 153

Query: 206 IICGIDLGERLKT--PKLFALTSPLLTTASG---------TKMGKTLSG---AIWLNKEM 251
           +    ++ E+        F +  PL+               KM K+  G   AI+L   +
Sbjct: 154 LELTRNIAEKFNRDFGNCFKVPEPLIAKVGARVMGLDDPKVKMSKSHQGANHAIFL---L 210

Query: 252 TSPYNFWQYWRNIDDADV---------------VSFAKRLTTLPMSEIDRMAKLQGKEIN 296
             P    +  +      +               ++    L+      I+   K +G    
Sbjct: 211 DEPDIIVRKIKKAATDSMGVIAFDEKREGVFNLLNIYMLLSNESPENIEERFKNKG--YG 268

Query: 297 EAKKIIATEITTMVHG-REEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMGLL 353
           + KK +A  +   +   +E  ++ +   ++        +  P   ++  +    MGL+
Sbjct: 269 DFKKELAEVVIQALKPIQERYKEISDDEVKAILNGGVKKAKPLAQMTYQKAKELMGLI 326


>gi|240047413|ref|YP_002960801.1| Pseudouridine synthase [Mycoplasma conjunctivae HRC/581]
 gi|239984985|emb|CAT04978.1| Pseudouridine synthase [Mycoplasma conjunctivae]
          Length = 233

 Score = 37.1 bits (85), Expect = 5.7,   Method: Composition-based stats.
 Identities = 8/32 (25%), Positives = 14/32 (43%), Gaps = 1/32 (3%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSI 383
           L  LI + G   S  +A + +K   + +N   
Sbjct: 7   LQKLIAQVGLC-SRRQAEQMIKDGKVYLNGEK 37


>gi|163803577|ref|ZP_02197444.1| pseudouridine synthase family 1 protein [Vibrio sp. AND4]
 gi|159172619|gb|EDP57476.1| pseudouridine synthase family 1 protein [Vibrio sp. AND4]
          Length = 383

 Score = 37.1 bits (85), Expect = 5.7,   Method: Composition-based stats.
 Identities = 9/29 (31%), Positives = 13/29 (44%), Gaps = 1/29 (3%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNS 382
             I + GF  S  EA R ++   + IN  
Sbjct: 11  KFISETGFC-SRREADRLIEQGRVTINGQ 38


>gi|58263106|ref|XP_568963.1| nam9 protein, mitochondrial precursor [Cryptococcus neoformans var.
           neoformans JEC21]
 gi|57223613|gb|AAW41656.1| nam9 protein, mitochondrial precursor, putative [Cryptococcus
           neoformans var. neoformans JEC21]
          Length = 317

 Score = 37.1 bits (85), Expect = 5.7,   Method: Composition-based stats.
 Identities = 10/48 (20%), Positives = 21/48 (43%), Gaps = 3/48 (6%)

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQD---FDSTGNIKLSFGKKNH 411
           EARR++    +K+N  ++ N  + +   D    + +  + L   K   
Sbjct: 159 EARRYVVQGHVKLNGQVMRNPNIMLNPGDVFTVNPSQIVMLQAPKSKF 206


>gi|134107834|ref|XP_777299.1| hypothetical protein CNBB1020 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50259989|gb|EAL22652.1| hypothetical protein CNBB1020 [Cryptococcus neoformans var.
           neoformans B-3501A]
          Length = 317

 Score = 37.1 bits (85), Expect = 5.7,   Method: Composition-based stats.
 Identities = 10/48 (20%), Positives = 21/48 (43%), Gaps = 3/48 (6%)

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQD---FDSTGNIKLSFGKKNH 411
           EARR++    +K+N  ++ N  + +   D    + +  + L   K   
Sbjct: 159 EARRYVVQGHVKLNGQVMRNPNIMLNPGDVFTVNPSQIVMLQAPKSKF 206


>gi|320590340|gb|EFX02783.1| 30S ribosomal subunit [Grosmannia clavigera kw1407]
          Length = 450

 Score = 37.1 bits (85), Expect = 5.8,   Method: Composition-based stats.
 Identities = 8/36 (22%), Positives = 17/36 (47%)

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
           FA+S  +AR+ +   A+++N   +      +   D 
Sbjct: 150 FASSARQARQFVVHGAVRVNGKKMVYPGYLLNPGDL 185


>gi|320449902|ref|YP_004201998.1| ribosomal RNA large subunit methyltransferase J [Thermus
           scotoductus SA-01]
 gi|320150071|gb|ADW21449.1| ribosomal RNA large subunit methyltransferase J [Thermus
           scotoductus SA-01]
          Length = 244

 Score = 37.1 bits (85), Expect = 5.8,   Method: Composition-based stats.
 Identities = 8/39 (20%), Positives = 21/39 (53%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
           +V+ G A S  +A+R ++S  +K+   +++    ++   
Sbjct: 7   LVERGLAESREKAQRLIQSGQVKVAGQVVTKPAHRVPEG 45


>gi|261207741|ref|ZP_05922426.1| tryptophanyl-tRNA synthetase [Enterococcus faecium TC 6]
 gi|260078124|gb|EEW65830.1| tryptophanyl-tRNA synthetase [Enterococcus faecium TC 6]
          Length = 244

 Score = 37.1 bits (85), Expect = 5.8,   Method: Composition-based stats.
 Identities = 39/224 (17%), Positives = 69/224 (30%), Gaps = 40/224 (17%)

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKN--------YDCRLQMGGSDQWGNIICGID 211
           + +        F  F Y + QA D      N             Q     Q  N   G  
Sbjct: 26  QKKFGESVPTGF--FIYPVSQAADITAFKANLVPVGEDQKPMLEQTQEIVQSFNHTYGEV 83

Query: 212 LGERLKTPKLFALTSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQ-YWRN------ 263
           L E         +    L    G  KM K+L   I+++     P +  Q    +      
Sbjct: 84  LVEPKGVFPPKGMGR--LPGIDGNGKMSKSLGNGIYISD----PADVLQKKVMSMYTDPN 137

Query: 264 ---------IDDADVVSFAKRL-TTLP-MSEIDRMAKLQGKEINEAKKIIAT----EITT 308
                    ++   V ++     T    + E+    +  G    + K+ +      E   
Sbjct: 138 HIHVQDPGQVEGNMVFTYLDVFGTDKEAIEEMKAHYRRGGLGDVKIKRYLIDVLEAEFAP 197

Query: 309 MVHGREEAEKAATAAME-CFDMSIHSQHMPTISISKDEVSRGMG 351
           +   REE EK  +A ME     S  +  +   ++S+ + + G+ 
Sbjct: 198 IRARREELEKDPSAVMEILRKGSEEAAKVAAQTLSEVKSAMGIN 241


>gi|304315968|ref|YP_003851113.1| ribosomal protein S4 [Thermoanaerobacterium thermosaccharolyticum
           DSM 571]
 gi|302777470|gb|ADL68029.1| ribosomal protein S4 [Thermoanaerobacterium thermosaccharolyticum
           DSM 571]
          Length = 206

 Score = 37.1 bits (85), Expect = 5.8,   Method: Composition-based stats.
 Identities = 13/60 (21%), Positives = 22/60 (36%), Gaps = 8/60 (13%)

Query: 349 GMGLLTLI--------VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG 400
           G  LL L+         +   A+S  +AR+ +    I +N   +      +K  D  S  
Sbjct: 89  GDNLLQLLERRLDNVVYRLSIASSRAQARQFVAHGHILVNGKKVDIPSYLVKAGDVISVK 148


>gi|150020827|ref|YP_001306181.1| hemolysin A [Thermosipho melanesiensis BI429]
 gi|149793348|gb|ABR30796.1| hemolysin A [Thermosipho melanesiensis BI429]
          Length = 264

 Score = 37.1 bits (85), Expect = 5.8,   Method: Composition-based stats.
 Identities = 9/31 (29%), Positives = 16/31 (51%)

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIIS 385
           L+VK G   S  +A+R + S  + +N   + 
Sbjct: 8   LLVKKGLVESREKAKRLIMSGNVIVNEERVD 38


>gi|110803415|ref|YP_699574.1| ribosomal large subunit pseudouridine synthase f [Clostridium
           perfringens SM101]
 gi|110683916|gb|ABG87286.1| RNA pseudouridine synthase family protein [Clostridium perfringens
           SM101]
          Length = 298

 Score = 37.1 bits (85), Expect = 5.8,   Method: Composition-based stats.
 Identities = 13/65 (20%), Positives = 29/65 (44%), Gaps = 4/65 (6%)

Query: 342 SKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD--FDST 399
           +K+E+   + L   I + GF  S  EA + ++   +KI+    +   +++      F   
Sbjct: 52  NKNEIRDEVRLNKYISETGFC-SRREADKLIEQGRVKIDGVKAT-TGMKVSKGQSVFIDG 109

Query: 400 GNIKL 404
             +K+
Sbjct: 110 KPLKV 114


>gi|72161610|ref|YP_289267.1| pseudouridine synthase, Rsu [Thermobifida fusca YX]
 gi|71915342|gb|AAZ55244.1| pseudouridine synthase, Rsu [Thermobifida fusca YX]
          Length = 375

 Score = 37.1 bits (85), Expect = 5.8,   Method: Composition-based stats.
 Identities = 7/50 (14%), Positives = 20/50 (40%), Gaps = 1/50 (2%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
           +V  G+ L   + +AG   S       + +  + ++  I+     ++  +
Sbjct: 130 DVPGGIRLQKALAQAG-VASRRACEELIAAGRVSVDGQIVRRFGARVDPE 178


>gi|296140073|ref|YP_003647316.1| pseudouridine synthase [Tsukamurella paurometabola DSM 20162]
 gi|296028207|gb|ADG78977.1| pseudouridine synthase [Tsukamurella paurometabola DSM 20162]
          Length = 319

 Score = 37.1 bits (85), Expect = 5.8,   Method: Composition-based stats.
 Identities = 7/48 (14%), Positives = 21/48 (43%), Gaps = 1/48 (2%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
              + L  ++ +AG   S   A   +    ++++  I++ + L++   
Sbjct: 76  GEKIRLQKVLAQAG-VASRRVAEEMIADGRVEVDGEIVTEQGLRVDPS 122


>gi|291280122|ref|YP_003496957.1| 30S ribosomal protein S4 [Deferribacter desulfuricans SSM1]
 gi|290754824|dbj|BAI81201.1| 30S ribosomal protein S4 [Deferribacter desulfuricans SSM1]
          Length = 208

 Score = 37.1 bits (85), Expect = 5.8,   Method: Composition-based stats.
 Identities = 23/118 (19%), Positives = 40/118 (33%), Gaps = 30/118 (25%)

Query: 292 GKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMG 351
           G ++ E +K+        ++G  E           FD +   Q +            G  
Sbjct: 54  GLQLREKQKV------KRIYGVLE-----RQFRRYFDRATRMQGI-----------TGEN 91

Query: 352 LLTLI--------VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
           LL L+         ++GFA S  EAR+ ++ N   +N   ++      K  D      
Sbjct: 92  LLQLLERRLDNVVYRSGFARSRKEARQLIRHNHFLVNGRKVNIPSFLCKEGDVVEVKE 149


>gi|260776566|ref|ZP_05885461.1| ribosomal large subunit pseudouridine synthase F [Vibrio
           coralliilyticus ATCC BAA-450]
 gi|260607789|gb|EEX34054.1| ribosomal large subunit pseudouridine synthase F [Vibrio
           coralliilyticus ATCC BAA-450]
          Length = 344

 Score = 37.1 bits (85), Expect = 5.8,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 16/46 (34%), Gaps = 1/46 (2%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDST 399
             I + GF  S  EA R ++   + IN  +       +   D    
Sbjct: 10  KFISETGFC-SRREADRLIEQGRVTINGKVPEMGTKVLPGDDVCVD 54


>gi|257463990|ref|ZP_05628375.1| 30S ribosomal protein S4 [Fusobacterium sp. D12]
 gi|317061512|ref|ZP_07925997.1| SSU ribosomal protein S4P [Fusobacterium sp. D12]
 gi|313687188|gb|EFS24023.1| SSU ribosomal protein S4P [Fusobacterium sp. D12]
          Length = 195

 Score = 37.1 bits (85), Expect = 5.8,   Method: Composition-based stats.
 Identities = 10/79 (12%), Positives = 33/79 (41%), Gaps = 3/79 (3%)

Query: 320 ATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKI 379
                + +D +     +  +++ +    R   ++    + GFA +  +AR+ +    + +
Sbjct: 61  EKQFRKLYDEAARKLGVTGLTLIEYLERRLENVVY---RLGFAKTRRQARQIVSHGHVTV 117

Query: 380 NNSIISNEKLQIKLQDFDS 398
           N   ++    ++K+ D  +
Sbjct: 118 NGRRVNIASYRVKVGDVIA 136


>gi|304317769|ref|YP_003852914.1| leucyl-tRNA synthetase [Thermoanaerobacterium thermosaccharolyticum
           DSM 571]
 gi|302779271|gb|ADL69830.1| leucyl-tRNA synthetase [Thermoanaerobacterium thermosaccharolyticum
           DSM 571]
          Length = 814

 Score = 37.1 bits (85), Expect = 5.8,   Method: Composition-based stats.
 Identities = 6/40 (15%), Positives = 15/40 (37%), Gaps = 7/40 (17%)

Query: 228 LLTTASGTKMGKTLSGAIWLNK-------EMTSPYNFWQY 260
           ++    G KM K+    I  ++       ++   Y  + +
Sbjct: 567 IILGPDGNKMSKSRGNTISPDEYINEYGSDVFRMYLMFGF 606


>gi|254775517|ref|ZP_05217033.1| ribosomal large subunit pseudouridine synthase B [Mycobacterium
           avium subsp. avium ATCC 25291]
          Length = 247

 Score = 37.1 bits (85), Expect = 5.8,   Method: Composition-based stats.
 Identities = 7/48 (14%), Positives = 24/48 (50%), Gaps = 1/48 (2%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
           ++G+ L  ++ +AG A S   A + +    ++++  +++    ++   
Sbjct: 4   AQGIRLQKVLSQAGIA-SRRAAEKLIVDGRVEVDGQVVTELGTRVDPD 50


>gi|237508333|ref|ZP_04521048.1| leucyl-tRNA synthetase (Leucine--tRNA ligase) (LeuRS) [Burkholderia
           pseudomallei MSHR346]
 gi|235000538|gb|EEP49962.1| leucyl-tRNA synthetase (Leucine--tRNA ligase) (LeuRS) [Burkholderia
           pseudomallei MSHR346]
          Length = 734

 Score = 37.1 bits (85), Expect = 5.8,   Method: Composition-based stats.
 Identities = 23/144 (15%), Positives = 45/144 (31%), Gaps = 24/144 (16%)

Query: 193 CRLQMGGSDQWGNIICGIDLG----ERLK----TPKLFALTSPLLTTASGTKMGKTLSGA 244
             L +GG+DQ       + +       +        +  L +  +      KM K+   A
Sbjct: 482 VDLMIGGADQVRTCFFHVRMIARALRGMGIADVDEPVTTLLALGMVKQDDRKMSKSAGNA 541

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           + L   +      +        AD +  A      P ++++    L  +     ++    
Sbjct: 542 VSLASIIER----YG-------ADALRLAIIGAAAPENDVNWSDDLVRR-----QRAFVA 585

Query: 305 EITTMVHGREEAEKAATAAMECFD 328
            +   VH   E E    AA +  D
Sbjct: 586 RLWAFVHRVAETEAGIAAAHDAGD 609


>gi|226197558|ref|ZP_03793133.1| leucine--tRNA ligase [Burkholderia pseudomallei Pakistan 9]
 gi|225930167|gb|EEH26179.1| leucine--tRNA ligase [Burkholderia pseudomallei Pakistan 9]
          Length = 439

 Score = 37.1 bits (85), Expect = 5.8,   Method: Composition-based stats.
 Identities = 23/144 (15%), Positives = 45/144 (31%), Gaps = 24/144 (16%)

Query: 193 CRLQMGGSDQWGNIICGIDLG----ERLK----TPKLFALTSPLLTTASGTKMGKTLSGA 244
             L +GG+DQ       + +       +        +  L +  +      KM K+   A
Sbjct: 187 VDLMIGGADQVRTCFFHVRMIARALRGMGIADVDEPVTTLLALGMVKQDDRKMSKSAGNA 246

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           + L   +      +        AD +  A      P ++++    L  +     ++    
Sbjct: 247 VSLASIIER----YG-------ADALRLAIIGAAAPENDVNWSDDLVRR-----QRAFVA 290

Query: 305 EITTMVHGREEAEKAATAAMECFD 328
            +   VH   E E    AA +  D
Sbjct: 291 RLWAFVHRVAETEAGIAAAHDAGD 314


>gi|217418703|ref|ZP_03450210.1| putative leucyl-tRNA synthetase [Burkholderia pseudomallei 576]
 gi|217398007|gb|EEC38022.1| putative leucyl-tRNA synthetase [Burkholderia pseudomallei 576]
          Length = 737

 Score = 37.1 bits (85), Expect = 5.8,   Method: Composition-based stats.
 Identities = 23/144 (15%), Positives = 45/144 (31%), Gaps = 24/144 (16%)

Query: 193 CRLQMGGSDQWGNIICGIDLG----ERLK----TPKLFALTSPLLTTASGTKMGKTLSGA 244
             L +GG+DQ       + +       +        +  L +  +      KM K+   A
Sbjct: 485 VDLMIGGADQVRTCFFHVRMIARALRGMGIADVDEPVTTLLALGMVKQDDRKMSKSAGNA 544

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           + L   +      +        AD +  A      P ++++    L  +     ++    
Sbjct: 545 VSLASIIER----YG-------ADALRLAIIGAAAPENDVNWSDDLVRR-----QRAFVA 588

Query: 305 EITTMVHGREEAEKAATAAMECFD 328
            +   VH   E E    AA +  D
Sbjct: 589 RLWAFVHRVAETEAGIAAAHDAGD 612


>gi|167922295|ref|ZP_02509386.1| leucyl-tRNA synthetase [Burkholderia pseudomallei BCC215]
          Length = 398

 Score = 37.1 bits (85), Expect = 5.8,   Method: Composition-based stats.
 Identities = 23/144 (15%), Positives = 45/144 (31%), Gaps = 24/144 (16%)

Query: 193 CRLQMGGSDQWGNIICGIDLG----ERLK----TPKLFALTSPLLTTASGTKMGKTLSGA 244
             L +GG+DQ       + +       +        +  L +  +      KM K+   A
Sbjct: 146 VDLMIGGADQVRTCFFHVRMIARALRGMGIADVDEPVTTLLALGMVKQDDRKMSKSAGNA 205

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           + L   +      +        AD +  A      P ++++    L  +     ++    
Sbjct: 206 VSLASIIER----YG-------ADALRLAIIGAAAPENDVNWSDDLVRR-----QRAFVA 249

Query: 305 EITTMVHGREEAEKAATAAMECFD 328
            +   VH   E E    AA +  D
Sbjct: 250 RLWAFVHRVAETEAGIAAAHDAGD 273


>gi|167914394|ref|ZP_02501485.1| leucyl-tRNA synthetase [Burkholderia pseudomallei 112]
          Length = 381

 Score = 37.1 bits (85), Expect = 5.8,   Method: Composition-based stats.
 Identities = 23/144 (15%), Positives = 45/144 (31%), Gaps = 24/144 (16%)

Query: 193 CRLQMGGSDQWGNIICGIDLG----ERLK----TPKLFALTSPLLTTASGTKMGKTLSGA 244
             L +GG+DQ       + +       +        +  L +  +      KM K+   A
Sbjct: 129 VDLMIGGADQVRTCFFHVRMIARALRGMGIADVDEPVTTLLALGMVKQDDRKMSKSAGNA 188

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           + L   +      +        AD +  A      P ++++    L  +     ++    
Sbjct: 189 VSLASIIER----YG-------ADALRLAIIGAAAPENDVNWSDDLVRR-----QRAFVA 232

Query: 305 EITTMVHGREEAEKAATAAMECFD 328
            +   VH   E E    AA +  D
Sbjct: 233 RLWAFVHRVAETEAGIAAAHDAGD 256


>gi|167906073|ref|ZP_02493278.1| leucyl-tRNA synthetase [Burkholderia pseudomallei NCTC 13177]
          Length = 391

 Score = 37.1 bits (85), Expect = 5.8,   Method: Composition-based stats.
 Identities = 23/144 (15%), Positives = 45/144 (31%), Gaps = 24/144 (16%)

Query: 193 CRLQMGGSDQWGNIICGIDLG----ERLK----TPKLFALTSPLLTTASGTKMGKTLSGA 244
             L +GG+DQ       + +       +        +  L +  +      KM K+   A
Sbjct: 139 VDLMIGGADQVRTCFFHVRMIARALRGMGIADVDEPVTTLLALGMVKQDDRKMSKSAGNA 198

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           + L   +      +        AD +  A      P ++++    L  +     ++    
Sbjct: 199 VSLASIIER----YG-------ADALRLAIIGAAAPENDVNWSDDLVRR-----QRAFVA 242

Query: 305 EITTMVHGREEAEKAATAAMECFD 328
            +   VH   E E    AA +  D
Sbjct: 243 RLWAFVHRVAETEAGIAAAHDAGD 266


>gi|167897729|ref|ZP_02485131.1| leucyl-tRNA synthetase [Burkholderia pseudomallei 7894]
          Length = 390

 Score = 37.1 bits (85), Expect = 5.8,   Method: Composition-based stats.
 Identities = 23/144 (15%), Positives = 45/144 (31%), Gaps = 24/144 (16%)

Query: 193 CRLQMGGSDQWGNIICGIDLG----ERLK----TPKLFALTSPLLTTASGTKMGKTLSGA 244
             L +GG+DQ       + +       +        +  L +  +      KM K+   A
Sbjct: 138 VDLMIGGADQVRTCFFHVRMIARALRGMGIADVDEPVTTLLALGMVKQDDRKMSKSAGNA 197

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           + L   +      +        AD +  A      P ++++    L  +     ++    
Sbjct: 198 VSLASIIER----YG-------ADALRLAIIGAAAPENDVNWSDDLVRR-----QRAFVA 241

Query: 305 EITTMVHGREEAEKAATAAMECFD 328
            +   VH   E E    AA +  D
Sbjct: 242 RLWAFVHRVAETEAGIAAAHDAGD 265


>gi|167849132|ref|ZP_02474640.1| putative leucyl-tRNA synthetase [Burkholderia pseudomallei B7210]
          Length = 346

 Score = 37.1 bits (85), Expect = 5.8,   Method: Composition-based stats.
 Identities = 23/144 (15%), Positives = 45/144 (31%), Gaps = 24/144 (16%)

Query: 193 CRLQMGGSDQWGNIICGIDLG----ERLK----TPKLFALTSPLLTTASGTKMGKTLSGA 244
             L +GG+DQ       + +       +        +  L +  +      KM K+   A
Sbjct: 94  VDLMIGGADQVRTCFFHVRMIARALRGMGIADVDEPVTTLLALGMVKQDDRKMSKSAGNA 153

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           + L   +      +        AD +  A      P ++++    L  +     ++    
Sbjct: 154 VSLASIIER----YG-------ADALRLAIIGAAAPENDVNWSDDLVRR-----QRAFVA 197

Query: 305 EITTMVHGREEAEKAATAAMECFD 328
            +   VH   E E    AA +  D
Sbjct: 198 RLWAFVHRVAETEAGIAAAHDAGD 221


>gi|167827657|ref|ZP_02459128.1| leucyl-tRNA synthetase [Burkholderia pseudomallei 9]
          Length = 385

 Score = 37.1 bits (85), Expect = 5.8,   Method: Composition-based stats.
 Identities = 23/144 (15%), Positives = 45/144 (31%), Gaps = 24/144 (16%)

Query: 193 CRLQMGGSDQWGNIICGIDLG----ERLK----TPKLFALTSPLLTTASGTKMGKTLSGA 244
             L +GG+DQ       + +       +        +  L +  +      KM K+   A
Sbjct: 133 VDLMIGGADQVRTCFFHVRMIARALRGMGIADVDEPVTTLLALGMVKQDDRKMSKSAGNA 192

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           + L   +      +        AD +  A      P ++++    L  +     ++    
Sbjct: 193 VSLASIIER----YG-------ADALRLAIIGAAAPENDVNWSDDLVRR-----QRAFVA 236

Query: 305 EITTMVHGREEAEKAATAAMECFD 328
            +   VH   E E    AA +  D
Sbjct: 237 RLWAFVHRVAETEAGIAAAHDAGD 260


>gi|167819287|ref|ZP_02450967.1| leucyl-tRNA synthetase [Burkholderia pseudomallei 91]
          Length = 387

 Score = 37.1 bits (85), Expect = 5.8,   Method: Composition-based stats.
 Identities = 23/144 (15%), Positives = 45/144 (31%), Gaps = 24/144 (16%)

Query: 193 CRLQMGGSDQWGNIICGIDLG----ERLK----TPKLFALTSPLLTTASGTKMGKTLSGA 244
             L +GG+DQ       + +       +        +  L +  +      KM K+   A
Sbjct: 135 VDLMIGGADQVRTCFFHVRMIARALRGMGIADVDEPVTTLLALGMVKQDDRKMSKSAGNA 194

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           + L   +      +        AD +  A      P ++++    L  +     ++    
Sbjct: 195 VSLASIIER----YG-------ADALRLAIIGAAAPENDVNWSDDLVRR-----QRAFVA 238

Query: 305 EITTMVHGREEAEKAATAAMECFD 328
            +   VH   E E    AA +  D
Sbjct: 239 RLWAFVHRVAETEAGIAAAHDAGD 262


>gi|167742103|ref|ZP_02414877.1| leucyl-tRNA synthetase [Burkholderia pseudomallei 14]
          Length = 372

 Score = 37.1 bits (85), Expect = 5.8,   Method: Composition-based stats.
 Identities = 23/144 (15%), Positives = 45/144 (31%), Gaps = 24/144 (16%)

Query: 193 CRLQMGGSDQWGNIICGIDLG----ERLK----TPKLFALTSPLLTTASGTKMGKTLSGA 244
             L +GG+DQ       + +       +        +  L +  +      KM K+   A
Sbjct: 120 VDLMIGGADQVRTCFFHVRMIARALRGMGIADVDEPVTTLLALGMVKQDDRKMSKSAGNA 179

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           + L   +      +        AD +  A      P ++++    L  +     ++    
Sbjct: 180 VSLASIIER----YG-------ADALRLAIIGAAAPENDVNWSDDLVRR-----QRAFVA 223

Query: 305 EITTMVHGREEAEKAATAAMECFD 328
            +   VH   E E    AA +  D
Sbjct: 224 RLWAFVHRVAETEAGIAAAHDAGD 247


>gi|167723127|ref|ZP_02406363.1| putative leucyl-tRNA synthetase [Burkholderia pseudomallei DM98]
          Length = 391

 Score = 37.1 bits (85), Expect = 5.8,   Method: Composition-based stats.
 Identities = 23/144 (15%), Positives = 45/144 (31%), Gaps = 24/144 (16%)

Query: 193 CRLQMGGSDQWGNIICGIDLG----ERLK----TPKLFALTSPLLTTASGTKMGKTLSGA 244
             L +GG+DQ       + +       +        +  L +  +      KM K+   A
Sbjct: 139 VDLMIGGADQVRTCFFHVRMIARALRGMGIADVDEPVTTLLALGMVKQDDRKMSKSAGNA 198

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           + L   +      +        AD +  A      P ++++    L  +     ++    
Sbjct: 199 VSLASIIER----YG-------ADALRLAIIGAAAPENDVNWSDDLVRR-----QRAFVA 242

Query: 305 EITTMVHGREEAEKAATAAMECFD 328
            +   VH   E E    AA +  D
Sbjct: 243 RLWAFVHRVAETEAGIAAAHDAGD 266


>gi|134103232|ref|YP_001108893.1| 30S ribosomal protein S4 [Saccharopolyspora erythraea NRRL 2338]
 gi|291007976|ref|ZP_06565949.1| 30S ribosomal protein S4 [Saccharopolyspora erythraea NRRL 2338]
 gi|152112258|sp|A4FPJ3|RS4_SACEN RecName: Full=30S ribosomal protein S4
 gi|133915855|emb|CAM05968.1| 30S ribosomal protein S4 [Saccharopolyspora erythraea NRRL 2338]
          Length = 201

 Score = 37.1 bits (85), Expect = 5.8,   Method: Composition-based stats.
 Identities = 16/106 (15%), Positives = 32/106 (30%), Gaps = 16/106 (15%)

Query: 311 HGR------EEAEKAATAAMECFDMSIHSQHMPTI--SISKDEVSRGMGLLTLI------ 356
           HGR      E   +        F   +  +   +     ++     G  LL ++      
Sbjct: 36  HGRARIKETEYLLQLQEKQKAKFTYGVLERQFRSYYEEANRRPGKTGDNLLQVLECRLDN 95

Query: 357 --VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG 400
              +AG A +   AR+ +      +N   ++    Q+   D     
Sbjct: 96  VVYRAGLARTRRMARQLVSHGHFTVNGKKVNIPSYQVSKWDIIDVK 141


>gi|134279208|ref|ZP_01765921.1| putative leucyl-tRNA synthetase [Burkholderia pseudomallei 305]
 gi|254193176|ref|ZP_04899611.1| putative leucyl-tRNA synthetase [Burkholderia pseudomallei S13]
 gi|134249627|gb|EBA49708.1| putative leucyl-tRNA synthetase [Burkholderia pseudomallei 305]
 gi|169649930|gb|EDS82623.1| putative leucyl-tRNA synthetase [Burkholderia pseudomallei S13]
          Length = 734

 Score = 37.1 bits (85), Expect = 5.8,   Method: Composition-based stats.
 Identities = 23/144 (15%), Positives = 45/144 (31%), Gaps = 24/144 (16%)

Query: 193 CRLQMGGSDQWGNIICGIDLG----ERLK----TPKLFALTSPLLTTASGTKMGKTLSGA 244
             L +GG+DQ       + +       +        +  L +  +      KM K+   A
Sbjct: 482 VDLMIGGADQVRTCFFHVRMIARALRGMGIADVDEPVTTLLALGMVKQDDRKMSKSAGNA 541

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           + L   +      +        AD +  A      P ++++    L  +     ++    
Sbjct: 542 VSLASIIER----YG-------ADALRLAIIGAAAPENDVNWSDDLVRR-----QRAFVA 585

Query: 305 EITTMVHGREEAEKAATAAMECFD 328
            +   VH   E E    AA +  D
Sbjct: 586 RLWAFVHRVAETEAGIAAAHDAGD 609


>gi|53721846|ref|YP_110831.1| tRNA synthetase [Burkholderia pseudomallei K96243]
 gi|52212260|emb|CAH38282.1| putative tRNA synthetase [Burkholderia pseudomallei K96243]
          Length = 734

 Score = 37.1 bits (85), Expect = 5.8,   Method: Composition-based stats.
 Identities = 23/144 (15%), Positives = 45/144 (31%), Gaps = 24/144 (16%)

Query: 193 CRLQMGGSDQWGNIICGIDLG----ERLK----TPKLFALTSPLLTTASGTKMGKTLSGA 244
             L +GG+DQ       + +       +        +  L +  +      KM K+   A
Sbjct: 482 VDLMIGGADQVRTCFFHVRMIARALRGMGIADVDEPVTTLLALGMVKQDDRKMSKSAGNA 541

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           + L   +      +        AD +  A      P ++++    L  +     ++    
Sbjct: 542 VSLASIIER----YG-------ADALRLAIIGAAAPENDVNWSDDLVRR-----QRAFVA 585

Query: 305 EITTMVHGREEAEKAATAAMECFD 328
            +   VH   E E    AA +  D
Sbjct: 586 RLWAFVHRVAETEAGIAAAHDAGD 609


>gi|41407511|ref|NP_960347.1| hypothetical protein MAP1413 [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|41395864|gb|AAS03730.1| hypothetical protein MAP_1413 [Mycobacterium avium subsp.
           paratuberculosis K-10]
          Length = 247

 Score = 37.1 bits (85), Expect = 5.8,   Method: Composition-based stats.
 Identities = 7/48 (14%), Positives = 24/48 (50%), Gaps = 1/48 (2%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
           ++G+ L  ++ +AG A S   A + +    ++++  +++    ++   
Sbjct: 4   AQGIRLQKVLSQAGIA-SRRAAEKLIVDGRVEVDGQVVTELGTRVDPD 50


>gi|126445547|ref|YP_001062206.1| putative leucyl-tRNA synthetase [Burkholderia pseudomallei 668]
 gi|126456148|ref|YP_001075169.1| putative leucyl-tRNA synthetase [Burkholderia pseudomallei 1106a]
 gi|242312751|ref|ZP_04811768.1| putative leucyl-tRNA synthetase [Burkholderia pseudomallei 1106b]
 gi|126225038|gb|ABN88543.1| putative leucyl-tRNA synthetase [Burkholderia pseudomallei 668]
 gi|126229916|gb|ABN93329.1| putative leucyl-tRNA synthetase [Burkholderia pseudomallei 1106a]
 gi|242135990|gb|EES22393.1| putative leucyl-tRNA synthetase [Burkholderia pseudomallei 1106b]
          Length = 734

 Score = 37.1 bits (85), Expect = 5.8,   Method: Composition-based stats.
 Identities = 23/144 (15%), Positives = 45/144 (31%), Gaps = 24/144 (16%)

Query: 193 CRLQMGGSDQWGNIICGIDLG----ERLK----TPKLFALTSPLLTTASGTKMGKTLSGA 244
             L +GG+DQ       + +       +        +  L +  +      KM K+   A
Sbjct: 482 VDLMIGGADQVRTCFFHVRMIARALRGMGIADVDEPVTTLLALGMVKQDDRKMSKSAGNA 541

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           + L   +      +        AD +  A      P ++++    L  +     ++    
Sbjct: 542 VSLASIIER----YG-------ADALRLAIIGAAAPENDVNWSDDLVRR-----QRAFVA 585

Query: 305 EITTMVHGREEAEKAATAAMECFD 328
            +   VH   E E    AA +  D
Sbjct: 586 RLWAFVHRVAETEAGIAAAHDAGD 609


>gi|76817892|ref|YP_337561.1| leucyl-tRNA synthetase [Burkholderia pseudomallei 1710b]
 gi|254189889|ref|ZP_04896398.1| putative leucyl-tRNA synthetase [Burkholderia pseudomallei Pasteur
           52237]
 gi|254263827|ref|ZP_04954692.1| putative leucyl-tRNA synthetase [Burkholderia pseudomallei 1710a]
 gi|76582365|gb|ABA51839.1| leucyl-tRNA synthetase [Burkholderia pseudomallei 1710b]
 gi|157937566|gb|EDO93236.1| putative leucyl-tRNA synthetase [Burkholderia pseudomallei Pasteur
           52237]
 gi|254214829|gb|EET04214.1| putative leucyl-tRNA synthetase [Burkholderia pseudomallei 1710a]
          Length = 734

 Score = 37.1 bits (85), Expect = 5.8,   Method: Composition-based stats.
 Identities = 23/144 (15%), Positives = 45/144 (31%), Gaps = 24/144 (16%)

Query: 193 CRLQMGGSDQWGNIICGIDLG----ERLK----TPKLFALTSPLLTTASGTKMGKTLSGA 244
             L +GG+DQ       + +       +        +  L +  +      KM K+   A
Sbjct: 482 VDLMIGGADQVRTCFFHVRMIARALRGMGIADVDEPVTTLLALGMVKQDDRKMSKSAGNA 541

Query: 245 IWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIAT 304
           + L   +      +        AD +  A      P ++++    L  +     ++    
Sbjct: 542 VSLASIIER----YG-------ADALRLAIIGAAAPENDVNWSDDLVRR-----QRAFVA 585

Query: 305 EITTMVHGREEAEKAATAAMECFD 328
            +   VH   E E    AA +  D
Sbjct: 586 RLWAFVHRVAETEAGIAAAHDAGD 609


>gi|299143925|ref|ZP_07037005.1| isoleucine--tRNA ligase [Peptoniphilus sp. oral taxon 386 str.
           F0131]
 gi|298518410|gb|EFI42149.1| isoleucine--tRNA ligase [Peptoniphilus sp. oral taxon 386 str.
           F0131]
          Length = 1031

 Score = 37.1 bits (85), Expect = 5.9,   Method: Composition-based stats.
 Identities = 27/145 (18%), Positives = 46/145 (31%), Gaps = 20/145 (13%)

Query: 136 KYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELA-KNYDCR 194
            Y+D +         +     + +         + F +++Y      DF EL   N+ C 
Sbjct: 490 PYVDDIHLTCPHCGKSMTREKDVIDVWFDSGA-MPFAQWHYPFEHKDDFNELFPANFICE 548

Query: 195 LQMGGSDQ---WGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
               G DQ   W   +  I       TP    L + L+    G KM K+    +      
Sbjct: 549 ----GIDQTRGWFYSLLAISTYMTGVTPYKNVLVNDLILDKFGKKMSKSKGNTV------ 598

Query: 252 TSPYNFWQYWRNIDDADVVSFAKRL 276
             P+  +  +     AD V +    
Sbjct: 599 -QPFELFDKY----GADTVRWYLMY 618


>gi|254441794|ref|ZP_05055287.1| conserved hypothetical protein, putative [Octadecabacter
           antarcticus 307]
 gi|198251872|gb|EDY76187.1| conserved hypothetical protein, putative [Octadecabacter
           antarcticus 307]
          Length = 308

 Score = 37.1 bits (85), Expect = 5.9,   Method: Composition-based stats.
 Identities = 9/50 (18%), Positives = 22/50 (44%), Gaps = 1/50 (2%)

Query: 348 RGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
            G  +  ++ +AG   S  E+ + +++  + +N   I    L +  +D  
Sbjct: 19  PGDRIAKVLARAG-VASRRESEKIIEAGRVTVNGKTILTPALNVTDKDRI 67


>gi|323141768|ref|ZP_08076638.1| pseudouridylate synthase [Phascolarctobacterium sp. YIT 12067]
 gi|322413757|gb|EFY04606.1| pseudouridylate synthase [Phascolarctobacterium sp. YIT 12067]
          Length = 241

 Score = 37.1 bits (85), Expect = 5.9,   Method: Composition-based stats.
 Identities = 7/34 (20%), Positives = 18/34 (52%), Gaps = 1/34 (2%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIIS 385
           L  ++  AG   S  EA + + +  +++N  +++
Sbjct: 5   LQKILAAAG-VASRREAEKIITAGRVRVNGKVVT 37


>gi|311694417|gb|ADP97290.1| tryptophanyl-tRNA synthetase [marine bacterium HP15]
          Length = 391

 Score = 37.1 bits (85), Expect = 5.9,   Method: Composition-based stats.
 Identities = 23/106 (21%), Positives = 38/106 (35%), Gaps = 16/106 (15%)

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
           + R + E  +  LE    +L+    + L          G  ++    I G   G+ +   
Sbjct: 191 KRRYQEEGDMDALETARALLKEQQNISL----------GDRERLYGYIEGG--GKVILPE 238

Query: 220 KLFALTSPL-LTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNI 264
               LT    L    G KM K+ +  I L +E   P +  Q  R +
Sbjct: 239 PQPLLTPESKLPGLDGQKMSKSYNNYIGLREE---PDSVAQKVRTM 281


>gi|281412320|ref|YP_003346399.1| pseudouridine synthase [Thermotoga naphthophila RKU-10]
 gi|281373423|gb|ADA66985.1| pseudouridine synthase [Thermotoga naphthophila RKU-10]
          Length = 239

 Score = 37.1 bits (85), Expect = 5.9,   Method: Composition-based stats.
 Identities = 5/40 (12%), Positives = 17/40 (42%), Gaps = 1/40 (2%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           +  +G   +  E ++ +K   + +N  ++ +    +   D
Sbjct: 7   LSNSG-VGTRKEVKKLIKQGRVTVNGRVVLDPGHSVSEND 45


>gi|258569883|ref|XP_002543745.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
 gi|237904015|gb|EEP78416.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
          Length = 467

 Score = 37.1 bits (85), Expect = 5.9,   Method: Composition-based stats.
 Identities = 14/72 (19%), Positives = 31/72 (43%), Gaps = 4/72 (5%)

Query: 325 ECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSII 384
           + F  S     +P + ++   + R + +   I +A FA+ST +AR+ +    + +N   +
Sbjct: 110 KVFRRSTPP--IPYMQMTFAPLERRLDVA--IFRALFASSTRQARQFVVHGWVTVNGKKM 165

Query: 385 SNEKLQIKLQDF 396
                 +   D 
Sbjct: 166 QYPGYLLNPGDL 177


>gi|229828640|ref|ZP_04454709.1| hypothetical protein GCWU000342_00705 [Shuttleworthia satelles DSM
           14600]
 gi|229793234|gb|EEP29348.1| hypothetical protein GCWU000342_00705 [Shuttleworthia satelles DSM
           14600]
          Length = 377

 Score = 37.1 bits (85), Expect = 5.9,   Method: Composition-based stats.
 Identities = 22/101 (21%), Positives = 31/101 (30%), Gaps = 17/101 (16%)

Query: 164 KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKL-F 222
              Q L    F Y + QA D       +   +   G DQ   I    ++  R        
Sbjct: 136 DNAQGLPVGFFTYPVSQAADITA----FKATMVPVGEDQEPMIEQTREIVRRFNQTYQRD 191

Query: 223 ALTSP-----------LLTTASGT-KMGKTLSGAIWLNKEM 251
            L  P            L    G  KM K+L   I+L+ + 
Sbjct: 192 VLVEPDILLPETEAQRRLPGIDGKAKMSKSLGNCIYLSDDA 232


>gi|148381346|ref|YP_001255887.1| ribosomal protein S4 [Clostridium botulinum A str. ATCC 3502]
 gi|153933373|ref|YP_001385723.1| 30S ribosomal protein S4 [Clostridium botulinum A str. ATCC 19397]
 gi|153936972|ref|YP_001389130.1| 30S ribosomal protein S4 [Clostridium botulinum A str. Hall]
 gi|170755963|ref|YP_001783043.1| 30S ribosomal protein S4 [Clostridium botulinum B1 str. Okra]
 gi|171769228|sp|A7FZ00|RS4B_CLOB1 RecName: Full=30S ribosomal protein S4 B
 gi|172047867|sp|A5I7D0|RS4B_CLOBH RecName: Full=30S ribosomal protein S4 B
 gi|148290830|emb|CAL84965.1| 30S ribosomal protein S4 [Clostridium botulinum A str. ATCC 3502]
 gi|152929417|gb|ABS34917.1| 30S ribosomal protein S4 [Clostridium botulinum A str. ATCC 19397]
 gi|152932886|gb|ABS38385.1| 30S ribosomal protein S4 [Clostridium botulinum A str. Hall]
 gi|169121175|gb|ACA45011.1| 30S ribosomal protein S4 [Clostridium botulinum B1 str. Okra]
          Length = 197

 Score = 37.1 bits (85), Expect = 5.9,   Method: Composition-based stats.
 Identities = 11/38 (28%), Positives = 19/38 (50%)

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
           GFA S  +AR+ +    I +N S ++    ++K  D  
Sbjct: 98  GFANSIRQARQMVNHGHILVNGSKVNIPSYEVKTGDVI 135


>gi|93005736|ref|YP_580173.1| 23S rRNA pseudouridine synthase F [Psychrobacter cryohalolentis K5]
 gi|92393414|gb|ABE74689.1| ribosomal large subunit pseudouridine synthase F [Psychrobacter
           cryohalolentis K5]
          Length = 328

 Score = 37.1 bits (85), Expect = 5.9,   Method: Composition-based stats.
 Identities = 7/48 (14%), Positives = 17/48 (35%), Gaps = 1/48 (2%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
           I ++G   S  +A R ++   + +N    +     +        G + 
Sbjct: 13  ISESGIC-SRRDADRFIEQGNVYLNGKRAAVGDQVVAGDTVKVNGQLI 59


>gi|67926067|ref|ZP_00519319.1| Hemolysin A [Crocosphaera watsonii WH 8501]
 gi|67852087|gb|EAM47594.1| Hemolysin A [Crocosphaera watsonii WH 8501]
          Length = 270

 Score = 37.1 bits (85), Expect = 5.9,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 26/55 (47%), Gaps = 2/55 (3%)

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNE--KLQIKLQDFDSTGNIKLSFG 407
           L+VK    +S  +A+R +++  +K+N  II     +++I            +S G
Sbjct: 9   LLVKRDLCSSRQQAQRCIRAGEVKVNQRIIDKPGTEVEITADIELKAKPPYVSRG 63


>gi|327481126|gb|AEA84436.1| tryptophanyl-tRNA synthetase [Pseudomonas stutzeri DSM 4166]
          Length = 395

 Score = 37.1 bits (85), Expect = 6.0,   Method: Composition-based stats.
 Identities = 25/145 (17%), Positives = 51/145 (35%), Gaps = 17/145 (11%)

Query: 133 CSIKYIDLLREIGSFFSVNRM------LSFESVRSRLKREQSLSFLEFNYMILQAYDFVE 186
             + +I+  R++   F+             E+   +L ++ S  ++       +  D   
Sbjct: 147 DQLPHIEFARDVARRFNHLYGREDDFESKAEAAIRKLGKKTSKLYVSLRKSYQEQGDVEA 206

Query: 187 LAKNYDC-----RLQMGGSDQWGNIICGIDLGERLKTPKLFALT-SPLLTTASGTKMGKT 240
           L            + +G  ++    + G   G+ L       L  +P L+   G KM K+
Sbjct: 207 LNTARAVIKEQQTITIGDQERLYGYLEGC--GKLLLPEPQALLGEAPKLSGLDGGKMAKS 264

Query: 241 LSGAIWLNKEMTSPYNFWQYWRNID 265
            S AI+L     +P    +  R + 
Sbjct: 265 NSNAIYL---RDTPTEIEEKIRRMP 286


>gi|309389171|gb|ADO77051.1| hemolysin A [Halanaerobium praevalens DSM 2228]
          Length = 275

 Score = 37.1 bits (85), Expect = 6.0,   Method: Composition-based stats.
 Identities = 11/59 (18%), Positives = 22/59 (37%), Gaps = 4/59 (6%)

Query: 353 LTLIV-KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK---LSFG 407
           L ++V +     S ++A+R + +  + +N         QI           K   +S G
Sbjct: 7   LDILVTERKMFKSRSQAKRAIMAGLVFVNGQREDKAGTQIDPAAEIEYKGTKNPYVSRG 65


>gi|299830416|ref|YP_003734631.1| ribosomal protein S4 [Kryptoperidinium foliaceum]
 gi|297385118|gb|ADI40416.1| ribosomal protein S4 [Kryptoperidinium foliaceum]
          Length = 204

 Score = 37.1 bits (85), Expect = 6.0,   Method: Composition-based stats.
 Identities = 18/52 (34%), Positives = 27/52 (51%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
           M L TL    GFA+S  +AR+ +    I +NN +I+    Q +L+D  S   
Sbjct: 93  MRLDTLCFNLGFASSIAQARQLVNHGHITVNNKVINIPSFQCRLKDIISVKE 144


>gi|224370348|ref|YP_002604512.1| hypothetical protein HRM2_32690 [Desulfobacterium autotrophicum
           HRM2]
 gi|223693065|gb|ACN16348.1| conserved hypothetical protein [Desulfobacterium autotrophicum
           HRM2]
          Length = 111

 Score = 37.1 bits (85), Expect = 6.0,   Method: Composition-based stats.
 Identities = 12/75 (16%), Positives = 25/75 (33%)

Query: 332 HSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
            +Q MP            + L  ++       S  EA+  +    + +N  + + ++ +I
Sbjct: 35  ITQGMPMAVRDVQIEREPVELYKILKFENLVMSGGEAKHVITQGMVTLNGQVETRKRKKI 94

Query: 392 KLQDFDSTGNIKLSF 406
              D    G   L  
Sbjct: 95  FAGDVILFGQEVLKI 109


>gi|94266329|ref|ZP_01290031.1| Ribosomal protein S4:RNA-binding S4 [delta proteobacterium MLMS-1]
 gi|93453083|gb|EAT03562.1| Ribosomal protein S4:RNA-binding S4 [delta proteobacterium MLMS-1]
          Length = 209

 Score = 37.1 bits (85), Expect = 6.0,   Method: Composition-based stats.
 Identities = 18/77 (23%), Positives = 32/77 (41%), Gaps = 8/77 (10%)

Query: 339 ISISKDEVSRGMGLLTLI--------VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQ 390
           +   +     G  LL L+         + GFA+S N+AR  ++ N   +N   ++   LQ
Sbjct: 80  VEAERQRGVTGENLLRLLECRLDNVIYRLGFASSRNQARHLVRHNHFLLNGHKVNIPSLQ 139

Query: 391 IKLQDFDSTGNIKLSFG 407
           +K+ D  +        G
Sbjct: 140 VKVGDVLTVREKSRQKG 156


>gi|328465999|gb|EGF37180.1| tryptophanyl-tRNA synthetase [Listeria monocytogenes 1816]
          Length = 331

 Score = 37.1 bits (85), Expect = 6.0,   Method: Composition-based stats.
 Identities = 34/204 (16%), Positives = 60/204 (29%), Gaps = 45/204 (22%)

Query: 143 EIGSFFSVNRMLSFES----------VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYD 192
           E+ +      +L               + +   +  +S     Y  L A D +     Y 
Sbjct: 83  EVAAHAQAAWILQCNVYIGELERMTQFKDKSDGKAGVSAGLLTYPPLMAADILL----YQ 138

Query: 193 CRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-----------TKMGKT- 240
             L   G DQ  +I    DL ER         T P +                 KM K+ 
Sbjct: 139 TDLVPVGEDQKQHIELTRDLAERFNKKHADIFTMPEVFIPKQGARVMSLQDPTKKMSKSD 198

Query: 241 --LSGAIWLNKEMTSPYNFWQYWRN-IDDAD------------VVSFAKRLTTLPMSEID 285
             L  AI+L   +  P    +  ++ + D+             V +     + +    I 
Sbjct: 199 ANLKNAIFL---LDPPATIRKKIKSAVTDSSGIIEYNKEEKPGVSNLLTIYSVITGETIS 255

Query: 286 RMAKL-QGKEINEAKKIIATEITT 308
            + +   GK   + K  +A  +  
Sbjct: 256 TIEEKYVGKGYGDFKTDLAELVVA 279


>gi|320108281|ref|YP_004183871.1| leucyl-tRNA synthetase [Terriglobus saanensis SP1PR4]
 gi|319926802|gb|ADV83877.1| leucyl-tRNA synthetase [Terriglobus saanensis SP1PR4]
          Length = 846

 Score = 37.1 bits (85), Expect = 6.0,   Method: Composition-based stats.
 Identities = 20/102 (19%), Positives = 32/102 (31%), Gaps = 19/102 (18%)

Query: 210 IDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYN-----FWQYWRNI 264
            DLG          L +  +   +G KM K+    +  ++ M + Y       +  +   
Sbjct: 568 RDLGLIENDEPATRLFTQGMVIKNGAKMSKSKGNIVSPDE-MIAKYGADATRMYALFAAP 626

Query: 265 DDADVV----------SFAK---RLTTLPMSEIDRMAKLQGK 293
            D D+            F     RLTT     I    K + K
Sbjct: 627 PDRDLEWQEDGVAGISRFLARVYRLTTKYAPAIAAHEKREKK 668


>gi|238922435|ref|YP_002935948.1| hypothetical protein EUBREC_0003 [Eubacterium rectale ATCC 33656]
 gi|238874107|gb|ACR73814.1| Hypothetical protein EUBREC_0003 [Eubacterium rectale ATCC 33656]
 gi|291526544|emb|CBK92131.1| Uncharacterized conserved protein [Eubacterium rectale DSM 17629]
 gi|291529187|emb|CBK94773.1| Uncharacterized conserved protein [Eubacterium rectale M104/1]
          Length = 71

 Score = 37.1 bits (85), Expect = 6.0,   Method: Composition-based stats.
 Identities = 15/72 (20%), Positives = 24/72 (33%), Gaps = 19/72 (26%)

Query: 340 SISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDST 399
            IS  E    + L   + KA   +S  EA+  ++   + +N                   
Sbjct: 3   QISIREQDEFIKLGQALKKADLVSSGVEAKIVIQDGQVTVNGE----------------- 45

Query: 400 GNIKLSFGKKNH 411
              +L  GKK H
Sbjct: 46  --TELQRGKKLH 55


>gi|255533735|ref|YP_003094107.1| pseudouridine synthase [Pedobacter heparinus DSM 2366]
 gi|255346719|gb|ACU06045.1| pseudouridine synthase [Pedobacter heparinus DSM 2366]
          Length = 348

 Score = 37.1 bits (85), Expect = 6.0,   Method: Composition-based stats.
 Identities = 7/28 (25%), Positives = 13/28 (46%), Gaps = 1/28 (3%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSI 383
           I ++G   S   A R+++   + IN   
Sbjct: 12  ISESGLC-SRRAADRYIEQGNVYINGKK 38


>gi|255659528|ref|ZP_05404937.1| ribosomal protein S4 [Mitsuokella multacida DSM 20544]
 gi|260848081|gb|EEX68088.1| ribosomal protein S4 [Mitsuokella multacida DSM 20544]
          Length = 197

 Score = 37.1 bits (85), Expect = 6.0,   Method: Composition-based stats.
 Identities = 6/45 (13%), Positives = 18/45 (40%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
            ++ + G A +  +AR+ ++     +N   +      +   D  +
Sbjct: 91  NVVYRLGLANTRRQARQLVRHGHFTVNGKRVDIPSALVNAGDVIA 135


>gi|209966564|ref|YP_002299479.1| lysyl-tRNA synthetase [Rhodospirillum centenum SW]
 gi|209960030|gb|ACJ00667.1| lysyl-tRNA synthetase LysS [Rhodospirillum centenum SW]
          Length = 538

 Score = 37.1 bits (85), Expect = 6.0,   Method: Composition-based stats.
 Identities = 12/83 (14%), Positives = 21/83 (25%), Gaps = 4/83 (4%)

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            D+           +M G D   ++     +   L           L     G K+ KT 
Sbjct: 241 PDWGMRWSALGVDYEMSGKDLIPSVELAGKICRILGGQPPEGFNYELFLDEKGQKISKTK 300

Query: 242 SGAI----WLNKEMTSPYNFWQY 260
              +    WL          + +
Sbjct: 301 GNGLSVEEWLRYAPPESLALYMF 323


>gi|164686553|ref|ZP_02210581.1| hypothetical protein CLOBAR_00120 [Clostridium bartlettii DSM
           16795]
 gi|164604422|gb|EDQ97887.1| hypothetical protein CLOBAR_00120 [Clostridium bartlettii DSM
           16795]
          Length = 206

 Score = 37.1 bits (85), Expect = 6.0,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 17/42 (40%)

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
           G A S  EAR+ +      +N   +    L +K+ D  +   
Sbjct: 108 GLANSRKEARQLVTHAHFTLNGKKVDIPSLTVKVGDVIAVKE 149


>gi|119897119|ref|YP_932332.1| pseudouridylate synthase [Azoarcus sp. BH72]
 gi|119669532|emb|CAL93445.1| pseudouridylate synthase [Azoarcus sp. BH72]
          Length = 500

 Score = 37.1 bits (85), Expect = 6.0,   Method: Composition-based stats.
 Identities = 9/50 (18%), Positives = 19/50 (38%), Gaps = 1/50 (2%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
           E   G+ L  ++   G   S  EA   ++   + ++   +S    +I   
Sbjct: 257 EAPSGVRLSKVMADRGIC-SRREADELIERGWVFVDGRRVSELGTRIDPD 305


>gi|94499453|ref|ZP_01305990.1| Hypothetical protein yjbC [Oceanobacter sp. RED65]
 gi|94428207|gb|EAT13180.1| Hypothetical protein yjbC [Oceanobacter sp. RED65]
          Length = 376

 Score = 37.1 bits (85), Expect = 6.0,   Method: Composition-based stats.
 Identities = 8/28 (28%), Positives = 14/28 (50%), Gaps = 1/28 (3%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSI 383
           I ++G   S  EA R+++   + IN   
Sbjct: 13  ISESGIC-SRREADRYIEQGNVYINGKR 39


>gi|116196236|ref|XP_001223930.1| hypothetical protein CHGG_04716 [Chaetomium globosum CBS 148.51]
 gi|88180629|gb|EAQ88097.1| hypothetical protein CHGG_04716 [Chaetomium globosum CBS 148.51]
          Length = 382

 Score = 37.1 bits (85), Expect = 6.0,   Method: Composition-based stats.
 Identities = 8/46 (17%), Positives = 20/46 (43%), Gaps = 4/46 (8%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           + +   +    FA+S  +AR+ +   A+ +N   ++     +   D
Sbjct: 59  IAIFRAL----FASSARQARQFVLHGAVTVNGKKMTYPGYLLNPGD 100


>gi|95928290|ref|ZP_01311038.1| RNA-binding S4 [Desulfuromonas acetoxidans DSM 684]
 gi|95135561|gb|EAT17212.1| RNA-binding S4 [Desulfuromonas acetoxidans DSM 684]
          Length = 70

 Score = 37.1 bits (85), Expect = 6.0,   Method: Composition-based stats.
 Identities = 6/34 (17%), Positives = 16/34 (47%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSI 383
           + L  L+   G   S   A+R ++   ++++  +
Sbjct: 13  IELNNLLKVTGLCHSGGLAKRLIEDGEVRVDGQV 46


>gi|302669377|ref|YP_003829337.1| S4 domain protein YaaA [Butyrivibrio proteoclasticus B316]
 gi|302393850|gb|ADL32755.1| S4 domain protein YaaA [Butyrivibrio proteoclasticus B316]
          Length = 71

 Score = 37.1 bits (85), Expect = 6.1,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 24/57 (42%)

Query: 340 SISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
           +I   E    + L   + KAG   S  +A+  +++  +K+N  +      ++   D 
Sbjct: 3   TIRLREGDDFIKLGQALKKAGLEGSGVDAKNDIQAGLVKVNGEVEERRGRKLYDGDI 59


>gi|261405769|ref|YP_003242010.1| 30S ribosomal protein S4 [Paenibacillus sp. Y412MC10]
 gi|329922609|ref|ZP_08278161.1| ribosomal protein S4 [Paenibacillus sp. HGF5]
 gi|261282232|gb|ACX64203.1| ribosomal protein S4 [Paenibacillus sp. Y412MC10]
 gi|328941951|gb|EGG38234.1| ribosomal protein S4 [Paenibacillus sp. HGF5]
          Length = 200

 Score = 37.1 bits (85), Expect = 6.1,   Method: Composition-based stats.
 Identities = 10/82 (12%), Positives = 23/82 (28%), Gaps = 3/82 (3%)

Query: 320 ATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKI 379
                  F+ +   + +               L  L+ + GF+ S   AR+ +    + +
Sbjct: 65  EKQFRTLFNKATSMKGIAG---ENFMFLLESRLDNLVYRLGFSNSRAGARQLVAHGHVTV 121

Query: 380 NNSIISNEKLQIKLQDFDSTGN 401
           N   +      +   D      
Sbjct: 122 NGKKVDIASYAVSTGDVIGLRE 143


>gi|148269796|ref|YP_001244256.1| pseudouridine synthase [Thermotoga petrophila RKU-1]
 gi|147735340|gb|ABQ46680.1| ribosomal small subunit pseudouridine synthase A [Thermotoga
           petrophila RKU-1]
          Length = 239

 Score = 37.1 bits (85), Expect = 6.1,   Method: Composition-based stats.
 Identities = 5/40 (12%), Positives = 17/40 (42%), Gaps = 1/40 (2%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           +  +G   +  E ++ +K   + +N  ++ +    +   D
Sbjct: 7   LSNSG-VGTRKEVKKLIKQGRVTVNGRVVLDPGHSVSEND 45


>gi|26553585|ref|NP_757519.1| pseudouridine synthase [Mycoplasma penetrans HF-2]
 gi|26453591|dbj|BAC43923.1| pseudouridine synthase [Mycoplasma penetrans HF-2]
          Length = 298

 Score = 37.1 bits (85), Expect = 6.1,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 24/42 (57%)

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
           L ++V + F+ S + A+  +++N + +N  IIS    ++  +
Sbjct: 7   LDILVSSKFSLSRSIAKHKIENNLVTVNGKIISKPNTKVDEE 48


>gi|331092461|ref|ZP_08341285.1| hypothetical protein HMPREF9477_01928 [Lachnospiraceae bacterium
           2_1_46FAA]
 gi|330401201|gb|EGG80793.1| hypothetical protein HMPREF9477_01928 [Lachnospiraceae bacterium
           2_1_46FAA]
          Length = 243

 Score = 36.7 bits (84), Expect = 6.1,   Method: Composition-based stats.
 Identities = 9/61 (14%), Positives = 23/61 (37%), Gaps = 2/61 (3%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
              + L   + +AG   S  EA R +++  + ++    +   +++        G   +  
Sbjct: 3   EELIRLNKFLSEAGVC-SRREADRLIEAGKVFVDGRR-AETGMRVSPAQEIKVGKKVIHK 60

Query: 407 G 407
           G
Sbjct: 61  G 61


>gi|292669832|ref|ZP_06603258.1| 30S ribosomal protein S4 [Selenomonas noxia ATCC 43541]
 gi|292648629|gb|EFF66601.1| 30S ribosomal protein S4 [Selenomonas noxia ATCC 43541]
          Length = 197

 Score = 36.7 bits (84), Expect = 6.1,   Method: Composition-based stats.
 Identities = 10/57 (17%), Positives = 22/57 (38%), Gaps = 8/57 (14%)

Query: 349 GMGLLTLI--------VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
           G  LL+L+         + G A +  +AR+ ++     +N   +      ++  D  
Sbjct: 78  GENLLSLLERRLDNVVFRLGLANTRRQARQLVRHGHFTVNGKRVDIPSALVREGDVI 134


>gi|282164926|ref|YP_003357311.1| 30S ribosomal protein S4P [Methanocella paludicola SANAE]
 gi|282157240|dbj|BAI62328.1| 30S ribosomal protein S4P [Methanocella paludicola SANAE]
          Length = 208

 Score = 36.7 bits (84), Expect = 6.1,   Method: Composition-based stats.
 Identities = 14/90 (15%), Positives = 34/90 (37%), Gaps = 2/90 (2%)

Query: 316 AEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMG--LLTLIVKAGFATSTNEARRHLK 373
           A +A     +   + +  +      I   +V   +   L T++ + G+A S  +AR+ + 
Sbjct: 74  AREAGQIQAKLQKLGVLKEDSKLEDILALKVEDLLERQLQTIVFRKGYANSMKQARQFIV 133

Query: 374 SNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
              + +N   I+     +   + D+     
Sbjct: 134 HGHVSLNGRKITVPSYMVLKAEEDTISYYI 163


>gi|189465443|ref|ZP_03014228.1| hypothetical protein BACINT_01796 [Bacteroides intestinalis DSM
           17393]
 gi|224537842|ref|ZP_03678381.1| hypothetical protein BACCELL_02729 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|189437717|gb|EDV06702.1| hypothetical protein BACINT_01796 [Bacteroides intestinalis DSM
           17393]
 gi|224520528|gb|EEF89633.1| hypothetical protein BACCELL_02729 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 201

 Score = 36.7 bits (84), Expect = 6.1,   Method: Composition-based stats.
 Identities = 9/82 (10%), Positives = 28/82 (34%), Gaps = 3/82 (3%)

Query: 320 ATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKI 379
                  F+ +  ++ + T  I    +   +    ++ + G A +   AR+ +    I +
Sbjct: 65  EKQFRNLFEKAETAKGI-TGEILLQLLEGRLD--NIVFRLGIAPTRAAARQLVGHKHITV 121

Query: 380 NNSIISNEKLQIKLQDFDSTGN 401
           +  +++     +K         
Sbjct: 122 DGEVVNIPSFAVKPGQVIGVRE 143


>gi|145294734|ref|YP_001137555.1| 30S ribosomal protein S4 [Corynebacterium glutamicum R]
 gi|172044394|sp|A4QBQ6|RS4_CORGB RecName: Full=30S ribosomal protein S4
 gi|140844654|dbj|BAF53653.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 201

 Score = 36.7 bits (84), Expect = 6.1,   Method: Composition-based stats.
 Identities = 8/48 (16%), Positives = 19/48 (39%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
            ++ +AG A +  +AR+ +      +N   I     ++   D  +   
Sbjct: 95  NVVYRAGLANTRRQARQLVSHGHFTVNGKAIDVPSFRVSQYDIINVRE 142


>gi|158319571|ref|YP_001512078.1| ribosomal protein S4 [Alkaliphilus oremlandii OhILAs]
 gi|172048249|sp|A8MLG8|RS4A_ALKOO RecName: Full=30S ribosomal protein S4 A
 gi|158139770|gb|ABW18082.1| ribosomal protein S4 [Alkaliphilus oremlandii OhILAs]
          Length = 207

 Score = 36.7 bits (84), Expect = 6.1,   Method: Composition-based stats.
 Identities = 12/58 (20%), Positives = 21/58 (36%), Gaps = 8/58 (13%)

Query: 349 GMGLLTLI--------VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
           G  LL L+         + GF +S  EAR+ +      +N   +      +   D  +
Sbjct: 89  GENLLRLLETRLDNVAYRLGFGSSRAEARQLVVHGHFTVNGKKVDIPSYLVSAGDTIA 146


>gi|220926957|ref|YP_002502259.1| lysyl-tRNA synthetase [Methylobacterium nodulans ORS 2060]
 gi|219951564|gb|ACL61956.1| Lysyl-tRNA synthetase class 1c [Methylobacterium nodulans ORS 2060]
          Length = 567

 Score = 36.7 bits (84), Expect = 6.2,   Method: Composition-based stats.
 Identities = 11/86 (12%), Positives = 25/86 (29%), Gaps = 2/86 (2%)

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            D+           +M G D   ++     +   L           L     G K+ K+ 
Sbjct: 244 PDWAMRWVALGVDYEMAGKDLIDSVKLSGQIARALGAEPPEGFNYELFLDEKGQKISKSK 303

Query: 242 SGAIWLNK--EMTSPYNFWQYWRNID 265
              + +++     +P +   +  N  
Sbjct: 304 GNGLTIDEWLAYGTPESLALFMYNRP 329


>gi|19551798|ref|NP_599800.1| 30S ribosomal protein S4 [Corynebacterium glutamicum ATCC 13032]
 gi|62389453|ref|YP_224855.1| 30S ribosomal protein S4 [Corynebacterium glutamicum ATCC 13032]
 gi|26399381|sp|Q8NSV4|RS4_CORGL RecName: Full=30S ribosomal protein S4
 gi|21323328|dbj|BAB97956.1| Ribosomal protein S4 and related proteins [Corynebacterium
           glutamicum ATCC 13032]
 gi|41324787|emb|CAF19269.1| RIBOSOMAL PROTEIN S4 [Corynebacterium glutamicum ATCC 13032]
          Length = 201

 Score = 36.7 bits (84), Expect = 6.2,   Method: Composition-based stats.
 Identities = 8/48 (16%), Positives = 19/48 (39%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
            ++ +AG A +  +AR+ +      +N   I     ++   D  +   
Sbjct: 95  NVVYRAGLANTRRQARQLVSHGHFTVNGKAIDVPSFRVSQYDIINVRE 142


>gi|322375206|ref|ZP_08049720.1| tryptophan--tRNA ligase [Streptococcus sp. C300]
 gi|321280706|gb|EFX57745.1| tryptophan--tRNA ligase [Streptococcus sp. C300]
          Length = 341

 Score = 36.7 bits (84), Expect = 6.2,   Method: Composition-based stats.
 Identities = 39/225 (17%), Positives = 65/225 (28%), Gaps = 38/225 (16%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKT--GHKPISLMGG---GTSIIGDPSFRDESRRMMRSQE 98
            T   LH GH    +    L +    ++    +      T    DP              
Sbjct: 12  PTGK-LHIGHYVGSLKNRVLLQEEDKYEMFVFLADQQALTDHAKDPQ------------T 58

Query: 99  IQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
           I E+I  +  +    +     K+   + +    L  +    +     +    N  +  E 
Sbjct: 59  IVESIGNV-ALDYLAVGLDPSKSTIFIQSQIPELAELSMYYMNLVSLARLERNPTVKTEI 117

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
            +          FL   Y I QA D      NY   + +G +DQ   I    ++      
Sbjct: 118 AQKGFGESIPTGFL--VYPIAQAADITAFKANY---VPVG-TDQKPMIEQTREIVRSFNH 171

Query: 219 P-KLFALTSP-----------LLTTASGT-KMGKTLSGAIWLNKE 250
                 L  P            L    G  KM K+L+  I+L  +
Sbjct: 172 AYNCEVLVEPEGIYPENERAGRLPGLDGNAKMSKSLNNGIYLADD 216


>gi|313885082|ref|ZP_07818834.1| ribosomal protein S4 [Eremococcus coleocola ACS-139-V-Col8]
 gi|312619773|gb|EFR31210.1| ribosomal protein S4 [Eremococcus coleocola ACS-139-V-Col8]
          Length = 201

 Score = 36.7 bits (84), Expect = 6.2,   Method: Composition-based stats.
 Identities = 7/48 (14%), Positives = 20/48 (41%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
            L+ + G+A++  +AR+ +    I ++   +      +K +       
Sbjct: 95  NLVYRLGYASTRRQARQLVAHGHITVDGQRVDIPSYLVKPEQVIGLRE 142


>gi|312127717|ref|YP_003992591.1| pseudouridine synthase [Caldicellulosiruptor hydrothermalis 108]
 gi|311777736|gb|ADQ07222.1| pseudouridine synthase [Caldicellulosiruptor hydrothermalis 108]
          Length = 233

 Score = 36.7 bits (84), Expect = 6.2,   Method: Composition-based stats.
 Identities = 8/46 (17%), Positives = 20/46 (43%), Gaps = 1/46 (2%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           M L   +   GF  S ++ ++ ++   + +N   I     +I  ++
Sbjct: 1   MRLDKFLTHCGF-GSRSQVKKLIRGGIVTVNGKRIVEVDFKINPEE 45


>gi|294678313|ref|YP_003578928.1| heat shock protein [Rhodobacter capsulatus SB 1003]
 gi|294477133|gb|ADE86521.1| heat shock protein [Rhodobacter capsulatus SB 1003]
          Length = 92

 Score = 36.7 bits (84), Expect = 6.2,   Method: Composition-based stats.
 Identities = 7/48 (14%), Positives = 18/48 (37%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
           + +   + +A FA S   A   + +  +++N   +      +   D  
Sbjct: 7   IRIDKWLWQARFAKSRALAVDLVTAGRVRVNGQKLEKPGRAVGPGDVL 54


>gi|282876641|ref|ZP_06285500.1| tryptophan--tRNA ligase [Staphylococcus epidermidis SK135]
 gi|281294576|gb|EFA87111.1| tryptophan--tRNA ligase [Staphylococcus epidermidis SK135]
          Length = 335

 Score = 36.7 bits (84), Expect = 6.2,   Method: Composition-based stats.
 Identities = 51/288 (17%), Positives = 84/288 (29%), Gaps = 49/288 (17%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENI 103
            T   LH GH    +    ++        +M      I D     ++ +    +     I
Sbjct: 12  PTGK-LHIGHYIGSLK-KRVEIQDQFNNFIM------IADQQALTDNAK-NPKKIQNSLI 62

Query: 104 EKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRL 163
           E I    S  I     K++  + +    L  +    L     S    N  +  E      
Sbjct: 63  EVILDYLSVGI--NPIKSNIFVQSQIPELSELTMYYLNLVSVSRLKRNPTVKNEMKEKNF 120

Query: 164 KREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP-KLF 222
                  F  F Y + QA D       +   +   G DQ   I    ++ +      K  
Sbjct: 121 GDSVPTGF--FIYPVSQAADITA----FKASIVPVGEDQIPMIEQTNEIVKTFNNIYKQN 174

Query: 223 AL----------TSPLLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRN-------- 263
            L              L    G  KM K+L+ AI+L+    SP    Q   +        
Sbjct: 175 VLKRSKALLPEKGMGRLPGIDGKAKMSKSLNNAIYLS---DSPDIIRQKVMSMYTDPNHI 231

Query: 264 -------IDDADVVSFAKRL--TTLPMSEIDRMAKLQGKEINEAKKII 302
                  I+D  V ++          ++E+    K  G    + KK +
Sbjct: 232 RVTDPGRIEDNTVFTYLDVFCKDKKYLAEMKEHYKAGGLGDVKVKKYL 279


>gi|253575267|ref|ZP_04852605.1| tryptophanyl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str.
           D14]
 gi|251845264|gb|EES73274.1| tryptophanyl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str.
           D14]
          Length = 327

 Score = 36.7 bits (84), Expect = 6.2,   Method: Composition-based stats.
 Identities = 44/295 (14%), Positives = 96/295 (32%), Gaps = 50/295 (16%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   +   L  G+    +  F   +  H    ++    + I  P             E  
Sbjct: 7   GIQPSGK-LTLGNYIGAIKNFVELQHDHACNFMIVDLHA-ITVPQ------------EPA 52

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
              E+ + + + ++  G     A +      +   +   LL  + S   + RM      +
Sbjct: 53  ALTEQSEAVAALYLAAGIDPNKANVYLQSHVMQHAQLGWLLTTLTSMGELERMTQ---FK 109

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
            +   ++S+    F Y  L A D +     Y+  L   G DQ  ++    DL  R     
Sbjct: 110 DKSAGKESVGVGLFVYPALMAADILI----YNADLVPVGDDQKQHLELTRDLAGRFNHRF 165

Query: 221 LFALTSP----------LLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYW-RNIDD-- 266
               T P          +++      KM K+          + +P    +   R   D  
Sbjct: 166 GEYFTLPEPYIPEVGARIMSLDDASKKMSKSNPNPGSYIALLDTPDEIRKKISRATTDSG 225

Query: 267 -------------ADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITT 308
                        +++++   + + L ++E+++  + +G+     KK +A  + +
Sbjct: 226 REVRFDPATKPEISNLITIYSQCSGLTIAEVEQ--RYEGQMYGPFKKDLAEVVVS 278


>gi|118465035|ref|YP_882249.1| ribosomal large subunit pseudouridine synthase B [Mycobacterium
           avium 104]
 gi|118166322|gb|ABK67219.1| ribosomal large subunit pseudouridine synthase B [Mycobacterium
           avium 104]
          Length = 248

 Score = 36.7 bits (84), Expect = 6.2,   Method: Composition-based stats.
 Identities = 7/48 (14%), Positives = 24/48 (50%), Gaps = 1/48 (2%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
           ++G+ L  ++ +AG A S   A + +    ++++  +++    ++   
Sbjct: 5   AQGIRLQKVLSQAGIA-SRRAAEKLIVDGRVEVDGQVVTELGTRVDPD 51


>gi|111017942|ref|YP_700914.1| pseudouridylate synthase ribosomal large subunit [Rhodococcus
           jostii RHA1]
 gi|110817472|gb|ABG92756.1| pseudouridylate synthase ribosomal large subunit [Rhodococcus
           jostii RHA1]
          Length = 241

 Score = 36.7 bits (84), Expect = 6.2,   Method: Composition-based stats.
 Identities = 9/46 (19%), Positives = 22/46 (47%), Gaps = 1/46 (2%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           M L  ++ +AG   S   A   +    ++++  I+  + L+I  ++
Sbjct: 1   MRLQKVLAQAG-VASRRAAEELISQGRVEVDGRIVIEQGLRIDPEN 45


>gi|18311295|ref|NP_563229.1| hypothetical protein CPE2313 [Clostridium perfringens str. 13]
 gi|18145978|dbj|BAB82019.1| conserved hypothetical protein [Clostridium perfringens str. 13]
          Length = 301

 Score = 36.7 bits (84), Expect = 6.2,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 22/44 (50%), Gaps = 1/44 (2%)

Query: 342 SKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIIS 385
           +K+E+   + L   I + GF  S  EA + ++   +KI+    +
Sbjct: 55  NKNEIRDEVRLNKYISETGFC-SRREADKLIEQGRVKIDGVKAT 97


>gi|330830231|ref|YP_004393183.1| 23S rRNA pseudouridine synthase F [Aeromonas veronii B565]
 gi|328805367|gb|AEB50566.1| 23S rRNA pseudouridine synthase F [Aeromonas veronii B565]
          Length = 338

 Score = 36.7 bits (84), Expect = 6.3,   Method: Composition-based stats.
 Identities = 10/37 (27%), Positives = 16/37 (43%), Gaps = 1/37 (2%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSI 383
           +  M L   I ++G   S  EA R ++   + IN   
Sbjct: 4   NESMRLNKYISESGIC-SRREADRFIEQGHVFINGKR 39


>gi|225016258|ref|ZP_03705450.1| hypothetical protein CLOSTMETH_00161 [Clostridium methylpentosum
           DSM 5476]
 gi|224950933|gb|EEG32142.1| hypothetical protein CLOSTMETH_00161 [Clostridium methylpentosum
           DSM 5476]
          Length = 208

 Score = 36.7 bits (84), Expect = 6.3,   Method: Composition-based stats.
 Identities = 13/40 (32%), Positives = 22/40 (55%)

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
           +AGFA+S  EAR+ +  N  ++N   ++   L +K  D  
Sbjct: 106 RAGFASSRAEARQLVLHNHFRLNGKKVNICSLLVKPGDVI 145


>gi|86748014|ref|YP_484510.1| lysyl-tRNA synthetase [Rhodopseudomonas palustris HaA2]
 gi|86571042|gb|ABD05599.1| lysyl-tRNA synthetase [Rhodopseudomonas palustris HaA2]
          Length = 545

 Score = 36.7 bits (84), Expect = 6.3,   Method: Composition-based stats.
 Identities = 18/134 (13%), Positives = 41/134 (30%), Gaps = 8/134 (5%)

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            D+           +M G D   ++     + + +           L     G K+ K+ 
Sbjct: 245 PDWAMRWTALGVDYEMAGKDLIDSVKLSGKIAQAIGGTPPEGFNYELFLDDKGQKISKSK 304

Query: 242 SGAIWLNK--EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAK-LQGKEINEA 298
              + +++     SP +   +      A      +    +    +D   + L G    +A
Sbjct: 305 GNGLTIDEWLRYASPESLSLFMYREPKA----AKRLYFDVIPRNVDEYQQFLDGFGRQDA 360

Query: 299 KKIIATEITTMVHG 312
           K+ +A      +H 
Sbjct: 361 KQQLA-NPVWHIHS 373


>gi|82702976|ref|YP_412542.1| pseudouridine synthase, Rsu [Nitrosospira multiformis ATCC 25196]
 gi|82411041|gb|ABB75150.1| ribosomal large subunit pseudouridine synthase B [Nitrosospira
           multiformis ATCC 25196]
          Length = 315

 Score = 36.7 bits (84), Expect = 6.3,   Method: Composition-based stats.
 Identities = 15/83 (18%), Positives = 27/83 (32%), Gaps = 10/83 (12%)

Query: 328 DMSIHSQHMPTISI-SKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISN 386
             SI     P   + S         L  ++ +AG   S  E    + S  + IN      
Sbjct: 50  KGSIKPAATPQSGVGSTSPQPVTQKLHKVLAQAGL-GSRREMEELIASGQVTINGK---- 104

Query: 387 EKLQIKLQDFDSTGNIKLSFGKK 409
                ++ D  +  ++    GK+
Sbjct: 105 ---TAQVGDRIAARDVV-RVGKR 123


>gi|77359432|ref|YP_339007.1| 16S rRNA pseudouridylate 516 synthase [Pseudoalteromonas
           haloplanktis TAC125]
 gi|76874343|emb|CAI85564.1| 16S rRNA pseudouridylate 516 synthase [Pseudoalteromonas
           haloplanktis TAC125]
          Length = 232

 Score = 36.7 bits (84), Expect = 6.3,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 25/55 (45%), Gaps = 1/55 (1%)

Query: 365 TNEARRHLKSNAIKINNSIISNEKLQIKLQD-FDSTGNIKLSFGKKNHIICHLCG 418
            ++AR  +K  A  +N  +++    QIK QD     G   +  GK+  ++    G
Sbjct: 19  RSKARASIKRQAALVNGEVVTAFDFQIKQQDEVVFQGEQLVFLGKRYFMLNKPVG 73


>gi|288818363|ref|YP_003432711.1| cysteinyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
 gi|288787763|dbj|BAI69510.1| cysteinyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
 gi|308751956|gb|ADO45439.1| cysteinyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
          Length = 490

 Score = 36.7 bits (84), Expect = 6.3,   Method: Composition-based stats.
 Identities = 41/204 (20%), Positives = 61/204 (29%), Gaps = 38/204 (18%)

Query: 181 AYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFA--LTSPLLTTASGTKMG 238
           A  F  L K  D     GG D                T K FA       L T  G KM 
Sbjct: 211 AMVFKHLGKTIDIHG--GGLDLVFPHHENEIAQAEALTGKPFARYWMHNGLVTVGGQKMS 268

Query: 239 KTLSGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLT------TLPMSEIDRMAKLQG 292
           K+L   + L +     Y  +         DV+      T           +++  AK   
Sbjct: 269 KSLGNYVTLREV----YRRYH-------PDVLRLLVLFTHYRSPLDFSWEKMEE-AKRAY 316

Query: 293 KEINEAKKIIATEITTMVHGREE----AEKAATAAMECFDMSIHSQHMPTISISKDEVSR 348
           + I  A + +       V    +     EK   A    F+      + P+  +S      
Sbjct: 317 ERIRHAIEDLDMLKNLQVVEENKISQLYEKVKEAEEAFFEDLSEDFNTPSA-LSH----- 370

Query: 349 GMGLLTLIVKAGFATST--NEARR 370
              +  L+ + G   S   +E RR
Sbjct: 371 ---IFALVGELGKVKSRAISE-RR 390


>gi|256380568|ref|YP_003104228.1| 30S ribosomal protein S4 [Actinosynnema mirum DSM 43827]
 gi|255924871|gb|ACU40382.1| ribosomal protein S4 [Actinosynnema mirum DSM 43827]
          Length = 201

 Score = 36.7 bits (84), Expect = 6.3,   Method: Composition-based stats.
 Identities = 8/47 (17%), Positives = 19/47 (40%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG 400
            ++ +AG A +  +AR+ +      +N   ++    Q+   D     
Sbjct: 95  NVVYRAGLARTRRQARQLVSHGHFLVNGHKVNIPSYQVSKFDIIDVK 141


>gi|126727934|ref|ZP_01743760.1| lysyl-tRNA synthetase [Rhodobacterales bacterium HTCC2150]
 gi|126702794|gb|EBA01901.1| lysyl-tRNA synthetase [Rhodobacterales bacterium HTCC2150]
          Length = 526

 Score = 36.7 bits (84), Expect = 6.3,   Method: Composition-based stats.
 Identities = 22/162 (13%), Positives = 39/162 (24%), Gaps = 27/162 (16%)

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            DF           +M G D   N      +   L        T  L     G K+ K+ 
Sbjct: 236 PDFGARWAALGVDFEMYGKDHSTNTPIYDSICRILGAKAPEHFTYELFLDEKGGKISKST 295

Query: 242 SGAIWLNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKI 301
              + ++                         + LT      +     L+ K        
Sbjct: 296 GNGLTID-------------------------EWLTYASTESLSYFMYLKPKTAKRMHFD 330

Query: 302 IATEITTMVHGREEAEKAATAAMECFDMSI--HSQHMPTISI 341
           +  +     H +  A      A    +     H  ++PT  +
Sbjct: 331 VIPKAVDEYHQQLRAYADQDTAKRLANPVFHIHGHNVPTSDM 372


>gi|284033972|ref|YP_003383903.1| 30S ribosomal protein S4 [Kribbella flavida DSM 17836]
 gi|283813265|gb|ADB35104.1| ribosomal protein S4 [Kribbella flavida DSM 17836]
          Length = 202

 Score = 36.7 bits (84), Expect = 6.4,   Method: Composition-based stats.
 Identities = 7/45 (15%), Positives = 19/45 (42%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
            ++ +AG A +  +AR+ +      +N   ++    ++   D   
Sbjct: 95  NVVYRAGLARTRRQARQLVVHGHFTVNGIKVNIPSYRVAAHDVID 139


>gi|261337851|ref|ZP_05965735.1| cytotoxin/hemolysin [Bifidobacterium gallicum DSM 20093]
 gi|270277318|gb|EFA23172.1| cytotoxin/hemolysin [Bifidobacterium gallicum DSM 20093]
          Length = 285

 Score = 36.7 bits (84), Expect = 6.4,   Method: Composition-based stats.
 Identities = 7/36 (19%), Positives = 17/36 (47%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIIS 385
           + L   +V+ G   S + A+R +    + ++   +S
Sbjct: 29  LRLDQALVRRGLVQSRSRAQRLIDEGRVFVDGKCVS 64


>gi|168205142|ref|ZP_02631147.1| RNA pseudouridine synthase family protein [Clostridium perfringens
           E str. JGS1987]
 gi|169347063|ref|ZP_02866005.1| RNA pseudouridine synthase family protein [Clostridium perfringens
           C str. JGS1495]
 gi|169296746|gb|EDS78875.1| RNA pseudouridine synthase family protein [Clostridium perfringens
           C str. JGS1495]
 gi|170663342|gb|EDT16025.1| RNA pseudouridine synthase family protein [Clostridium perfringens
           E str. JGS1987]
          Length = 301

 Score = 36.7 bits (84), Expect = 6.4,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 22/44 (50%), Gaps = 1/44 (2%)

Query: 342 SKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIIS 385
           +K+E+   + L   I + GF  S  EA + ++   +KI+    +
Sbjct: 55  NKNEIRDEVRLNKYISETGFC-SRREADKLIEQGRVKIDGVKAT 97


>gi|332981538|ref|YP_004462979.1| pseudouridine synthase [Mahella australiensis 50-1 BON]
 gi|332699216|gb|AEE96157.1| pseudouridine synthase [Mahella australiensis 50-1 BON]
          Length = 244

 Score = 36.7 bits (84), Expect = 6.4,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 21/45 (46%), Gaps = 1/45 (2%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
           + L   + + G   S  ++   +KS A+ +N  ++ +  + I  Q
Sbjct: 8   IRLHKYMAQCG-VASRRKSEELIKSGAVSVNGHVVKDMGILIDPQ 51


>gi|325955022|ref|YP_004238682.1| ribosomal protein S4 [Weeksella virosa DSM 16922]
 gi|323437640|gb|ADX68104.1| ribosomal protein S4 [Weeksella virosa DSM 16922]
          Length = 200

 Score = 36.7 bits (84), Expect = 6.4,   Method: Composition-based stats.
 Identities = 19/130 (14%), Positives = 43/130 (33%), Gaps = 14/130 (10%)

Query: 278 TLPMSEIDRMAKLQGKEINEAKK-----IIATEITTMV-HGREEAEKAATAAMECFDMSI 331
                +        G     +KK      +A +      +G  E           +  + 
Sbjct: 23  DKSFEKKKYPPGQHGPNKRRSKKSEYAIQLAEKQKAKYTYGILE-----RQFENMYKKAN 77

Query: 332 HSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
            S+ +    + +   SR   ++    + G A + + AR+ +    I +N +I++    Q+
Sbjct: 78  ASKGITGEVLLQLCESRLDNVVY---RLGIAPTRSAARQLVSHKHITVNGNIVNIPSYQL 134

Query: 392 KLQDFDSTGN 401
           K  D  +   
Sbjct: 135 KEGDVVAVRE 144


>gi|291613261|ref|YP_003523418.1| ribosomal protein S4 [Sideroxydans lithotrophicus ES-1]
 gi|291583373|gb|ADE11031.1| ribosomal protein S4 [Sideroxydans lithotrophicus ES-1]
          Length = 209

 Score = 36.7 bits (84), Expect = 6.4,   Method: Composition-based stats.
 Identities = 11/36 (30%), Positives = 21/36 (58%)

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           GF  S +EAR+ ++ N+I +N   ++    Q++  D
Sbjct: 109 GFGASRSEARQVVRHNSILVNGKRVNIPSYQVRPGD 144


>gi|206890097|ref|YP_002249221.1| ribosomal protein S4 [Thermodesulfovibrio yellowstonii DSM 11347]
 gi|226695094|sp|B5YG23|RS4_THEYD RecName: Full=30S ribosomal protein S4
 gi|206742035|gb|ACI21092.1| ribosomal protein S4 [Thermodesulfovibrio yellowstonii DSM 11347]
          Length = 208

 Score = 36.7 bits (84), Expect = 6.4,   Method: Composition-based stats.
 Identities = 19/125 (15%), Positives = 41/125 (32%), Gaps = 34/125 (27%)

Query: 292 GKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGMG 351
           G ++ E +K+        ++G  E           F+ +   + +            G  
Sbjct: 54  GLQLREKQKV------KRIYGVME-----RQFKNYFEKATKMKGV-----------TGEN 91

Query: 352 LLTLI--------VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
           LL L+         + GFA +  +AR+ ++     +N   +      ++  D        
Sbjct: 92  LLKLLERRLDNVIYRMGFAMNRRQARQLVRHGYFTVNGKKVDIPSYLVRPGDIIE----I 147

Query: 404 LSFGK 408
           +  GK
Sbjct: 148 VQSGK 152


>gi|160932173|ref|ZP_02079564.1| hypothetical protein CLOLEP_01008 [Clostridium leptum DSM 753]
 gi|156868775|gb|EDO62147.1| hypothetical protein CLOLEP_01008 [Clostridium leptum DSM 753]
          Length = 200

 Score = 36.7 bits (84), Expect = 6.4,   Method: Composition-based stats.
 Identities = 8/44 (18%), Positives = 20/44 (45%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
            ++ + GFA++  +AR+ +      +N   ++     +K  D  
Sbjct: 93  NVVYRLGFASTRRDARQLVNHGHFTVNGKRVNIPSYLVKPGDVI 136


>gi|147798253|emb|CAN67613.1| hypothetical protein VITISV_010260 [Vitis vinifera]
          Length = 269

 Score = 36.7 bits (84), Expect = 6.4,   Method: Composition-based stats.
 Identities = 14/70 (20%), Positives = 29/70 (41%), Gaps = 6/70 (8%)

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS-TGNIKLSFG---- 407
           +  +  AGF  S ++    + +  +++N + ++     +K  D  S +G  +L  G    
Sbjct: 196 VDALASAGFKLSRSKLVDLISNGDVRVNWTTVTKNGTTLKTGDVVSVSGKGRLKIGEINS 255

Query: 408 -KKNHIICHL 416
            KK      L
Sbjct: 256 TKKGKYAVEL 265


>gi|126662239|ref|ZP_01733238.1| 30S ribosomal protein S4 [Flavobacteria bacterium BAL38]
 gi|126625618|gb|EAZ96307.1| 30S ribosomal protein S4 [Flavobacteria bacterium BAL38]
          Length = 201

 Score = 36.7 bits (84), Expect = 6.4,   Method: Composition-based stats.
 Identities = 12/76 (15%), Positives = 26/76 (34%), Gaps = 3/76 (3%)

Query: 320 ATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKI 379
                  F  +  +  + T  I        +    ++ + G A S   AR+ +    I +
Sbjct: 66  EKQFRNLFKKASAASGV-TGEILLQLCEARLD--NVVYRMGVAPSRRAARQIVSHRHITV 122

Query: 380 NNSIISNEKLQIKLQD 395
           N  +++     +K  D
Sbjct: 123 NGELVNVPSYHLKAGD 138


>gi|116333868|ref|YP_795395.1| 30S ribosomal protein S4 [Lactobacillus brevis ATCC 367]
 gi|122269445|sp|Q03R08|RS4_LACBA RecName: Full=30S ribosomal protein S4
 gi|116099215|gb|ABJ64364.1| SSU ribosomal protein S4P [Lactobacillus brevis ATCC 367]
          Length = 201

 Score = 36.7 bits (84), Expect = 6.4,   Method: Composition-based stats.
 Identities = 8/44 (18%), Positives = 19/44 (43%)

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
           + G AT+  +AR+ +    I ++   +     ++K+    S   
Sbjct: 101 RLGLATTRRQARQLVNHGHITVDGQRVDIPSYEVKIGQVISVRE 144


>gi|317122229|ref|YP_004102232.1| 30S ribosomal protein S4P [Thermaerobacter marianensis DSM 12885]
 gi|315592209|gb|ADU51505.1| SSU ribosomal protein S4P [Thermaerobacter marianensis DSM 12885]
          Length = 201

 Score = 36.7 bits (84), Expect = 6.5,   Method: Composition-based stats.
 Identities = 11/48 (22%), Positives = 21/48 (43%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
            L+ + GFA S   AR+ +    I++N   +     Q++  D  +   
Sbjct: 97  NLVYRMGFAPSIWAARQLVVHGHIQVNGRKVDRPSYQVRPGDVIAVRE 144


>gi|242373152|ref|ZP_04818726.1| tryptophanyl-tRNA synthetase [Staphylococcus epidermidis M23864:W1]
 gi|242349103|gb|EES40704.1| tryptophanyl-tRNA synthetase [Staphylococcus epidermidis M23864:W1]
          Length = 329

 Score = 36.7 bits (84), Expect = 6.5,   Method: Composition-based stats.
 Identities = 35/199 (17%), Positives = 69/199 (34%), Gaps = 37/199 (18%)

Query: 140 LLREIGSFFSVNRMLS-FESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMG 198
           +L  I S   + RM    +  + R+     +      Y  L A D V     Y+  +   
Sbjct: 92  MLTTIASIGELERMTQFKDKAQKRV---DGVPAGLLTYPPLMAADIVI----YNTNIVPV 144

Query: 199 GSDQWGNIICGIDLGERLKTPKLFALTSPLL--TTASG---------TKMGKTLSGAIWL 247
           G DQ  ++    +L +R  +     L  P +      G          KM K+ +     
Sbjct: 145 GDDQKQHMELTRNLVDRFNSRYNDILVKPEIRMPKVGGRVMSLQDPTKKMSKSDNNQKNF 204

Query: 248 NKEMTSPYNFWQYWRN-IDDAD---------------VVSFAKRLTTLPMSEIDRMAKLQ 291
              +  P    +  ++ + D+D               ++S    LT  P+ +I+  A+ +
Sbjct: 205 ISLLDEPNVAAKKIKSAVTDSDGVIKFDRDNKPGVSNLLSIYSGLTDEPIKDIE--ARYE 262

Query: 292 GKEINEAKKIIATEITTMV 310
           G+   + K  +A  +   +
Sbjct: 263 GEGYGKFKGDLAEIVKEFL 281


>gi|149909440|ref|ZP_01898095.1| tryptophanyl-tRNA synthetase [Moritella sp. PE36]
 gi|149807550|gb|EDM67499.1| tryptophanyl-tRNA synthetase [Moritella sp. PE36]
          Length = 333

 Score = 36.7 bits (84), Expect = 6.5,   Method: Composition-based stats.
 Identities = 43/300 (14%), Positives = 90/300 (30%), Gaps = 54/300 (18%)

Query: 41  GYDLTASSLHAGHLT-QLMLLFWLQKTG--HKPISLMGGGTSIIGDPSFRDESRRMMRSQ 97
           G   +  S+  G+    +     +Q+    H  ++ +   T    DP             
Sbjct: 9   GIQPSG-SMTIGNYIGAINQWLDMQEHSDCHFMLADLHTITVR-QDPKEF--------KS 58

Query: 98  EIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFE 157
           ++ E +                K+   + +       + ++  L        +NRM    
Sbjct: 59  QVLEGLAMYIACG-----LDPEKSTIFLQSQVPEHAQLSWL--LNCYTQMGELNRMTQ-- 109

Query: 158 SVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK 217
             + +     S +   + Y +L A D + L +     +   G DQ  ++     +  R  
Sbjct: 110 -FKDKSNNSSSSNSGLYTYPVLMAADIL-LYQADAVPV---GDDQKQHLELARTIATRFN 164

Query: 218 T--PKLFALTSPLLTTASG---------TKMGKTLSGAIWLNKEMTSPYNFWQYWRNI-- 264
                +F +  P++ T             KM K+ +      K +  P    +  ++   
Sbjct: 165 NIYGDVFKVPEPMIPTLGARIMSLQDPLKKMSKSDANPKAFIKLLDDPKQIVKKLKSAVT 224

Query: 265 -DDADVVSFAK---------RLTTLPMSEIDRMAKL----QGKEINEAKKIIATEITTMV 310
             D     +            LT L ++    +A L    + K     KK  A  +  M+
Sbjct: 225 DSDEQARIYFDNKEKPGVSNLLTLLSVATKRPVADLVPEYEDKMYGHLKKDTADAVVAMI 284


>gi|313892596|ref|ZP_07826183.1| ribosomal protein S4 [Dialister microaerophilus UPII 345-E]
 gi|329121298|ref|ZP_08249925.1| 30S ribosomal protein S4 [Dialister micraerophilus DSM 19965]
 gi|313118993|gb|EFR42198.1| ribosomal protein S4 [Dialister microaerophilus UPII 345-E]
 gi|327470232|gb|EGF15695.1| 30S ribosomal protein S4 [Dialister micraerophilus DSM 19965]
          Length = 197

 Score = 36.7 bits (84), Expect = 6.5,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 23/61 (37%), Gaps = 8/61 (13%)

Query: 349 GMGLLTLI--------VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG 400
           G  LL L+         +AGFA S  +AR+ +    I +N   +      ++     S  
Sbjct: 77  GENLLALLERRLDNIVYRAGFARSIRQARQMVNHGLISVNGKKVDIPSYSVQPGQVVSLR 136

Query: 401 N 401
            
Sbjct: 137 E 137


>gi|292492445|ref|YP_003527884.1| ribosomal protein S4 [Nitrosococcus halophilus Nc4]
 gi|291581040|gb|ADE15497.1| ribosomal protein S4 [Nitrosococcus halophilus Nc4]
          Length = 208

 Score = 36.7 bits (84), Expect = 6.5,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 8/63 (12%)

Query: 347 SRGMGLLTLI--------VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
           S G  LL L+         + GF ++  EAR+ +    I +N  +I+    QI+ +D  S
Sbjct: 87  STGENLLKLLESRLDNVVYRMGFGSTRAEARQLISHKGILVNGKVINVPSYQIRAEDVVS 146

Query: 399 TGN 401
              
Sbjct: 147 VRE 149


>gi|240102270|ref|YP_002958578.1| tryptophanyl-tRNA synthetase [Thermococcus gammatolerans EJ3]
 gi|239909823|gb|ACS32714.1| Tryptophanyl-tRNA synthetase (trpS) [Thermococcus gammatolerans
           EJ3]
          Length = 384

 Score = 36.7 bits (84), Expect = 6.5,   Method: Composition-based stats.
 Identities = 37/230 (16%), Positives = 69/230 (30%), Gaps = 31/230 (13%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSF 86
           L+   S      Y G   +   +H GH+       WLQ+     + +             
Sbjct: 66  LEDYESGRGFFLYTGRGPSGP-MHIGHIIPFYATKWLQEKFGVNLYI-----------QI 113

Query: 87  RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGS 146
            D+ + + ++  + E            I  G       +  +  +       ++   I  
Sbjct: 114 TDDEKFLFKNLTLDETKRWAYENILDIIAVGFDPDKTFIFQDSEFTK---IYEMALPIAK 170

Query: 147 FFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQ-AYDFVELAKNYDCRLQMGGSDQWGN 205
              +N  ++        + +  + F    Y  +Q A  F    +   C +     DQ   
Sbjct: 171 K--INYSMAKAVFGFNEQSKIGMIF----YPAIQAAPTF---FERKRCLIP-AAIDQDPY 220

Query: 206 IICGIDLGE---RLKTPKLFALTSPLLTTASGTKMGKTLSG-AIWLNKEM 251
                D  E     KT  L +   P LT   G KM  +    A++L  + 
Sbjct: 221 WRLQRDFAESLGYYKTAALHSKFVPPLTGLEG-KMSASKPETAVYLTDDP 269


>gi|37912969|gb|AAR05301.1| ribosomal protein S4 [uncultured marine gamma proteobacterium
           EB000-45B06]
 gi|40063200|gb|AAR38037.1| ribosomal protein S4 [uncultured marine bacterium 562]
          Length = 207

 Score = 36.7 bits (84), Expect = 6.5,   Method: Composition-based stats.
 Identities = 19/76 (25%), Positives = 35/76 (46%), Gaps = 13/76 (17%)

Query: 347 SRGMGLLTLIVK--------AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
           + G  LL+L+ K         GF ++  EAR+ +   A K+N  +++    Q+K  D   
Sbjct: 86  NTGENLLSLLEKRMDNVVYRMGFGSTRAEARQMVSHKAFKVNGEVVNIPSYQMKAGD--- 142

Query: 399 TGNIKLSFGKKNHIIC 414
              +++   KK H+  
Sbjct: 143 --EVQVRDNKKGHLRI 156


>gi|46908432|ref|YP_014821.1| tryptophanyl-tRNA synthetase [Listeria monocytogenes serotype 4b
           str. F2365]
 gi|47091867|ref|ZP_00229662.1| tryptophanyl-tRNA synthetase [Listeria monocytogenes str. 4b H7858]
 gi|226224806|ref|YP_002758913.1| tryptophanyl-tRNA synthetase [Listeria monocytogenes Clip81459]
 gi|254825238|ref|ZP_05230239.1| tryptophanyl-tRNA synthetase [Listeria monocytogenes FSL J1-194]
 gi|254853323|ref|ZP_05242671.1| tryptophanyl-tRNA synthetase [Listeria monocytogenes FSL R2-503]
 gi|254931689|ref|ZP_05265048.1| tryptophanyl-tRNA synthetase [Listeria monocytogenes HPB2262]
 gi|255520168|ref|ZP_05387405.1| tryptophanyl-tRNA synthetase [Listeria monocytogenes FSL J1-175]
 gi|300763993|ref|ZP_07073989.1| tryptophanyl-tRNA synthetase [Listeria monocytogenes FSL N1-017]
 gi|67461794|sp|Q71XG7|SYW_LISMF RecName: Full=Tryptophanyl-tRNA synthetase; AltName:
           Full=Tryptophan--tRNA ligase; Short=TrpRS
 gi|46881703|gb|AAT04998.1| tryptophanyl-tRNA synthetase [Listeria monocytogenes serotype 4b
           str. F2365]
 gi|47019878|gb|EAL10616.1| tryptophanyl-tRNA synthetase [Listeria monocytogenes str. 4b H7858]
 gi|225877268|emb|CAS05982.1| tryptophanyl-tRNA synthetase [Listeria monocytogenes serotype 4b
           str. CLIP 80459]
 gi|258606686|gb|EEW19294.1| tryptophanyl-tRNA synthetase [Listeria monocytogenes FSL R2-503]
 gi|293583244|gb|EFF95276.1| tryptophanyl-tRNA synthetase [Listeria monocytogenes HPB2262]
 gi|293594484|gb|EFG02245.1| tryptophanyl-tRNA synthetase [Listeria monocytogenes FSL J1-194]
 gi|300515334|gb|EFK42385.1| tryptophanyl-tRNA synthetase [Listeria monocytogenes FSL N1-017]
 gi|332312650|gb|EGJ25745.1| Tryptophanyl-tRNA synthetase [Listeria monocytogenes str. Scott A]
          Length = 331

 Score = 36.7 bits (84), Expect = 6.5,   Method: Composition-based stats.
 Identities = 34/204 (16%), Positives = 60/204 (29%), Gaps = 45/204 (22%)

Query: 143 EIGSFFSVNRMLSFES----------VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYD 192
           E+ +      +L               + +   +  +S     Y  L A D +     Y 
Sbjct: 83  EVAAHAQAAWILQCNVYIGELERMTQFKDKSDGKAGVSAGLLTYPPLMAADILL----YQ 138

Query: 193 CRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASG-----------TKMGKT- 240
             L   G DQ  +I    DL ER         T P +                 KM K+ 
Sbjct: 139 TDLVPVGEDQKQHIELTRDLAERFNKKHADIFTMPEVFIPKQGARVMSLQDPTKKMSKSD 198

Query: 241 --LSGAIWLNKEMTSPYNFWQYWRN-IDDAD------------VVSFAKRLTTLPMSEID 285
             L  AI+L   +  P    +  ++ + D+             V +     + +    I 
Sbjct: 199 ANLKNAIFL---LDPPATIRKKIKSAVTDSSGIIEYNKEEKPGVSNLLTIYSVITGETIS 255

Query: 286 RMAKL-QGKEINEAKKIIATEITT 308
            + +   GK   + K  +A  +  
Sbjct: 256 TIEEKYVGKGYGDFKTDLAELVVA 279


>gi|312865862|ref|ZP_07726084.1| tryptophan--tRNA ligase [Streptococcus downei F0415]
 gi|311098737|gb|EFQ56959.1| tryptophan--tRNA ligase [Streptococcus downei F0415]
          Length = 341

 Score = 36.7 bits (84), Expect = 6.6,   Method: Composition-based stats.
 Identities = 39/229 (17%), Positives = 64/229 (27%), Gaps = 40/229 (17%)

Query: 44  LTASSLHAGHLTQ-LMLLFWLQKTGHKPISLM----GGGTSIIGDPSFRDESRRMMRSQE 98
            T   LH GH    L     LQ      + +        T    DP              
Sbjct: 12  PTGK-LHIGHYVGSLQNRVRLQNEDKYQMFVFLADQQALTDHAKDPQ------------T 58

Query: 99  IQENIEKIK-GIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFE 157
           I E++  +     ++ +     K+   + +    L  +    +     +    N  +  E
Sbjct: 59  IVESVGNVALDYLAAGLD--PEKSTIFIQSQIPELAELSMYYMNLVSLARLERNPTVKTE 116

Query: 158 SVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK 217
             +          FL   Y I QA D      N    + +G +DQ   I    ++     
Sbjct: 117 IAQKGFGESIPTGFL--VYPIAQAADITAFKAN---SVPVG-NDQKPMIEQTREIVRSFN 170

Query: 218 TP-KLFALTSP-----------LLTTASGT-KMGKTLSGAIWLNKEMTS 253
                  L  P            L    G  KM K+L   I+L  +  +
Sbjct: 171 HAYNCDVLVEPEGIYPENEAAGRLPGLDGNAKMSKSLGNGIYLADDADT 219


>gi|229815744|ref|ZP_04446069.1| hypothetical protein COLINT_02793 [Collinsella intestinalis DSM
           13280]
 gi|229808660|gb|EEP44437.1| hypothetical protein COLINT_02793 [Collinsella intestinalis DSM
           13280]
          Length = 198

 Score = 36.7 bits (84), Expect = 6.6,   Method: Composition-based stats.
 Identities = 10/48 (20%), Positives = 22/48 (45%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
            ++ + GFA +  EAR+ ++     +N   +     ++K  D  + G 
Sbjct: 92  NVVFRLGFARTRKEARQTVRHGHFTVNGKRVDIPSYRVKAGDVIAVGE 139


>gi|114320458|ref|YP_742141.1| glutamyl-tRNA synthetase [Alkalilimnicola ehrlichii MLHE-1]
 gi|122311819|sp|Q0A936|SYE1_ALHEH RecName: Full=Glutamyl-tRNA synthetase 1; AltName:
           Full=Glutamate--tRNA ligase 1; Short=GluRS 1
 gi|114226852|gb|ABI56651.1| glutamyl-tRNA synthetase [Alkalilimnicola ehrlichii MLHE-1]
          Length = 471

 Score = 36.7 bits (84), Expect = 6.6,   Method: Composition-based stats.
 Identities = 28/183 (15%), Positives = 60/183 (32%), Gaps = 17/183 (9%)

Query: 182 YDFVELAKNYDCRLQ--MGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGK 239
           Y+F  +  + D  +   + G D   N    ++L   L          P++    G ++ K
Sbjct: 182 YNFTVVVDDMDMGITHVVRGDDHLNNTPRQVNLYRALGVEPPVFAHVPMILGEDGKRLSK 241

Query: 240 TLSGAIWLNKEMTS---PYNFWQYWRNI----DDADVVSFAKRLTTLPMSEIDRMAKLQG 292
              GA+ + +       P     Y   +     D +V +  + ++   + +I+  A    
Sbjct: 242 -RHGAVSVLQYRDQGYLPEAVLNYLVRLGWSHGDQEVFTLDEMVSLFDLEDINHSASTFN 300

Query: 293 KEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS-ISKDEVSRGMG 351
                 +K++       +   E A  A   A    +  I     P +  +   +  R   
Sbjct: 301 P-----QKLL-WLNQQHIMRAEPAHVARYLAHHLGERDIDPADGPPLEAVVAAQQERAKT 354

Query: 352 LLT 354
           L+ 
Sbjct: 355 LVE 357


>gi|319898210|ref|YP_004158303.1| lysyl-tRNA synthetase [Bartonella clarridgeiae 73]
 gi|319402174|emb|CBI75705.1| lysyl-tRNA synthetase [Bartonella clarridgeiae 73]
          Length = 554

 Score = 36.7 bits (84), Expect = 6.6,   Method: Composition-based stats.
 Identities = 12/83 (14%), Positives = 23/83 (27%), Gaps = 4/83 (4%)

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           D+       +   +M G D   +      + + L           L     G K+ K+  
Sbjct: 249 DWAMRWTALEVDYEMAGKDLIDSTNLSSKICKILGGKPPEGFNYELFLDDKGQKISKSKG 308

Query: 243 GAI----WLNKEMTSPYNFWQYW 261
             +    WL    T     + + 
Sbjct: 309 NGLTIDEWLTYAPTESLGLYMFL 331


>gi|168186736|ref|ZP_02621371.1| unsaturated glucuronyl hydrolase [Clostridium botulinum C str.
           Eklund]
 gi|169295316|gb|EDS77449.1| unsaturated glucuronyl hydrolase [Clostridium botulinum C str.
           Eklund]
          Length = 403

 Score = 36.7 bits (84), Expect = 6.6,   Method: Composition-based stats.
 Identities = 17/104 (16%), Positives = 38/104 (36%), Gaps = 18/104 (17%)

Query: 92  RMMRSQEIQENIEKIKGIFSS-FIKYGTGKT---------DALMLNNETWLCSIKYIDLL 141
           +++  +E++  IEK   I      K+  G+             +++N  W     +  +L
Sbjct: 17  KLLTKEEVKGAIEKCIKIIEKNMKKFDDGEKYPDSSSRRYKYPIIDNSEWTTGF-WTGML 75

Query: 142 ---REIGSFFSVNRMLSFE--SVRSRLKREQSLSFLE--FNYMI 178
               E        ++   +  S + RL  + +L   +  F Y +
Sbjct: 76  WLAYEYTKDEKFKKLAEEDVLSFKKRLDDDYALGHHDLGFLYNL 119


>gi|332674353|gb|AEE71170.1| leucine--tRNA ligase [Helicobacter pylori 83]
          Length = 661

 Score = 36.7 bits (84), Expect = 6.7,   Method: Composition-based stats.
 Identities = 16/92 (17%), Positives = 26/92 (28%), Gaps = 11/92 (11%)

Query: 210 IDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADV 269
            DLG          L +  +    GTKM K+    +       SP    + +     AD 
Sbjct: 546 RDLGYLNLDEPFKQLITQGMVLKDGTKMSKSKGNVV-------SPKEILKKY----GADA 594

Query: 270 VSFAKRLTTLPMSEIDRMAKLQGKEINEAKKI 301
                     P  E++             K++
Sbjct: 595 ARLFILFAAPPAKELEWNDNALEGAHRFIKRL 626


>gi|329957324|ref|ZP_08297844.1| pseudouridylate synthase [Bacteroides clarus YIT 12056]
 gi|328523037|gb|EGF50140.1| pseudouridylate synthase [Bacteroides clarus YIT 12056]
          Length = 225

 Score = 36.7 bits (84), Expect = 6.7,   Method: Composition-based stats.
 Identities = 9/52 (17%), Positives = 24/52 (46%)

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICH 415
           S  EA   + +  + +N  +++    +IK  D     +  +S  +K +++ +
Sbjct: 3   SRREADEFITAGVVSVNGEVVTELGTKIKRGDEVKFHDQTVSIERKIYVLLN 54


>gi|270291299|ref|ZP_06197521.1| ribosomal large subunit pseudouridine synthase B [Pediococcus
           acidilactici 7_4]
 gi|304385048|ref|ZP_07367394.1| ribosomal large subunit pseudouridine synthase B [Pediococcus
           acidilactici DSM 20284]
 gi|270280145|gb|EFA25981.1| ribosomal large subunit pseudouridine synthase B [Pediococcus
           acidilactici 7_4]
 gi|304329242|gb|EFL96462.1| ribosomal large subunit pseudouridine synthase B [Pediococcus
           acidilactici DSM 20284]
          Length = 237

 Score = 36.7 bits (84), Expect = 6.7,   Method: Composition-based stats.
 Identities = 7/55 (12%), Positives = 23/55 (41%), Gaps = 1/55 (1%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
           L  ++ +AG   S  ++ + +    +K+N  ++     +++  D      + +  
Sbjct: 6   LQKVMAEAG-VASRRKSEKLIAEGHVKVNGRVVKELGTKVEQHDRIEVDEVPIQR 59


>gi|228938398|ref|ZP_04101008.1| Tryptophanyl-tRNA synthetase [Bacillus thuringiensis serovar
           berliner ATCC 10792]
 gi|228971277|ref|ZP_04131905.1| Tryptophanyl-tRNA synthetase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228977888|ref|ZP_04138269.1| Tryptophanyl-tRNA synthetase [Bacillus thuringiensis Bt407]
 gi|228781805|gb|EEM30002.1| Tryptophanyl-tRNA synthetase [Bacillus thuringiensis Bt407]
 gi|228788427|gb|EEM36378.1| Tryptophanyl-tRNA synthetase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228821260|gb|EEM67275.1| Tryptophanyl-tRNA synthetase [Bacillus thuringiensis serovar
           berliner ATCC 10792]
 gi|326938907|gb|AEA14803.1| tryptophanyl-tRNA synthetase [Bacillus thuringiensis serovar
           chinensis CT-43]
          Length = 329

 Score = 36.7 bits (84), Expect = 6.7,   Method: Composition-based stats.
 Identities = 48/298 (16%), Positives = 90/298 (30%), Gaps = 52/298 (17%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   + + +  G+    M  F   +  H     +    + I  P    + R+ +RS    
Sbjct: 7   GIQPSGT-ITLGNYLGAMKQFTELQNEHDCYFCIVNQHA-ITVPQDPVQLRKNIRSLAAL 64

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLS-FESV 159
                I    ++          A +     W        +++ +     + RM    +  
Sbjct: 65  YVACGIDPEKATLFVQSEVPAHAQL----GW--------IMQSVAYVGELERMTQYKDKA 112

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTP 219
             R      L      Y  L A D +     Y+  +   G DQ  +I    DL ER    
Sbjct: 113 SGRDSVPAGL----LTYPPLMAADILL----YNTEIVPVGDDQKQHIELTRDLAERFNKR 164

Query: 220 KLFALTSPLLTTAS-G----------TKMGKTLSGAIWLNKEMTSPYNFWQYWRN-IDDA 267
                T P +     G           KM K+      +   +  P    +  ++ + D+
Sbjct: 165 YREIFTMPEIRIPKVGARVMSLTEPTKKMSKSDPNPKSMISMLDEPKTIEKKIKSAVTDS 224

Query: 268 D-VVSFAKR--------------LTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMV 310
           + +V F K                +   + EI+ M   +GK   + K  +A  +   +
Sbjct: 225 EGIVKFDKENKPGISNLLTIYSSFSGKTVEEIEAMY--EGKGYGDFKGDLAQVVVEAI 280


>gi|166711380|ref|ZP_02242587.1| hypothetical protein Xoryp_07925 [Xanthomonas oryzae pv. oryzicola
           BLS256]
          Length = 80

 Score = 36.7 bits (84), Expect = 6.7,   Method: Composition-based stats.
 Identities = 11/67 (16%), Positives = 26/67 (38%)

Query: 340 SISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDST 399
           S+  D     + L  L+  AG A S  + +  + S A+ ++      +  +I+       
Sbjct: 3   SLEFDLDGDYIELNQLLKLAGIADSGGQGKAIVASGAVSVDGVQELRKTAKIRPGQLVQL 62

Query: 400 GNIKLSF 406
             +++  
Sbjct: 63  DGVEIRV 69


>gi|312144221|ref|YP_003995667.1| ribosomal protein S4 [Halanaerobium sp. 'sapolanicus']
 gi|311904872|gb|ADQ15313.1| ribosomal protein S4 [Halanaerobium sp. 'sapolanicus']
          Length = 208

 Score = 36.7 bits (84), Expect = 6.8,   Method: Composition-based stats.
 Identities = 12/31 (38%), Positives = 17/31 (54%)

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQ 390
           GFA+S NEAR+ +    IK+N   +     Q
Sbjct: 108 GFASSRNEARQFVLHGHIKVNGRKVDIPSYQ 138


>gi|306836026|ref|ZP_07469016.1| cytotoxin/hemolysin [Corynebacterium accolens ATCC 49726]
 gi|304568053|gb|EFM43628.1| cytotoxin/hemolysin [Corynebacterium accolens ATCC 49726]
          Length = 268

 Score = 36.7 bits (84), Expect = 6.8,   Method: Composition-based stats.
 Identities = 11/58 (18%), Positives = 25/58 (43%), Gaps = 8/58 (13%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSI------ISNEKLQIKLQDFDSTGNIKLSFG 407
           +V+   A S  +AR  +KS  + +          + + ++ IK+++ +       S G
Sbjct: 12  LVRRKIARSREQAREMIKSGRVTVGGFKAEKPATVVDPEVSIKVEESEEDKWA--SRG 67


>gi|227818294|ref|YP_002822265.1| ribosomal pseudouridine synthase B [Sinorhizobium fredii NGR234]
 gi|227337293|gb|ACP21512.1| putative ribosomal pseudouridine synthase B [Sinorhizobium fredii
           NGR234]
          Length = 263

 Score = 36.7 bits (84), Expect = 6.8,   Method: Composition-based stats.
 Identities = 8/45 (17%), Positives = 18/45 (40%), Gaps = 1/45 (2%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
           + L   + K G+  S  +A R +    + +     ++  L I + 
Sbjct: 26  VTLARALSKLGYC-SRTQAERLIAEGRVSVGGRKTTDLSLWIDID 69


>gi|154249790|ref|YP_001410615.1| 30S ribosomal protein S4 [Fervidobacterium nodosum Rt17-B1]
 gi|171769361|sp|A7HM25|RS4_FERNB RecName: Full=30S ribosomal protein S4
 gi|154153726|gb|ABS60958.1| RNA-binding S4 domain protein [Fervidobacterium nodosum Rt17-B1]
          Length = 209

 Score = 36.7 bits (84), Expect = 6.8,   Method: Composition-based stats.
 Identities = 19/124 (15%), Positives = 43/124 (34%), Gaps = 15/124 (12%)

Query: 285 DRMAKLQGKEINEAKKII-------ATEITTMVHGREEAEKAATAAMECFDMSIHSQHMP 337
           D+     G+   E KK+        A +    ++G  E +                +++ 
Sbjct: 34  DKRPFAPGQHGREKKKLTQYALQLRAKQTMKRIYGVLEKQFRIYYERAVKQSGDTRENL- 92

Query: 338 TISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
              +++ E      L  ++ + GFA +   AR+ +    + +N   +     Q++  D  
Sbjct: 93  ---VAQVE----RRLDNVVYRLGFAINRRAARQLVSHGHVLVNGKKVDIPSYQVRPGDVI 145

Query: 398 STGN 401
           S   
Sbjct: 146 SIKE 149


>gi|303249052|ref|ZP_07335296.1| valyl-tRNA synthetase [Desulfovibrio fructosovorans JJ]
 gi|302489575|gb|EFL49516.1| valyl-tRNA synthetase [Desulfovibrio fructosovorans JJ]
          Length = 889

 Score = 36.7 bits (84), Expect = 6.8,   Method: Composition-based stats.
 Identities = 16/105 (15%), Positives = 34/105 (32%), Gaps = 22/105 (20%)

Query: 206 IICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNID 265
           ++ G+   + +   +++     L+  A G KM K+L   I    +  +  + +       
Sbjct: 500 MMMGLHFMKEVPFKEVYI--HALVRDAEGRKMSKSLGNGI----DPLAMMDQYGT----- 548

Query: 266 DADVVSFAKRLTT--------LPMSEIDRMAKLQGKEINEAKKII 302
             D + F              L    I+       K  N A+  +
Sbjct: 549 --DALRF-TLAAFAAMGRDIKLSEERIEGYRHFVNKIWNAARFAL 590


>gi|302337501|ref|YP_003802707.1| ribosomal protein S4 [Spirochaeta smaragdinae DSM 11293]
 gi|301634686|gb|ADK80113.1| ribosomal protein S4 [Spirochaeta smaragdinae DSM 11293]
          Length = 211

 Score = 36.7 bits (84), Expect = 6.8,   Method: Composition-based stats.
 Identities = 8/41 (19%), Positives = 16/41 (39%)

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
           FA S  +AR+ +    I +N   ++     ++  D      
Sbjct: 110 FANSRKQARQLVSHGHILVNGKRVTIPSYVVRQGDEIEIRE 150


>gi|268319598|ref|YP_003293254.1| hypothetical protein FI9785_1123 [Lactobacillus johnsonii FI9785]
 gi|262397973|emb|CAX66987.1| conserved hypothetical protein [Lactobacillus johnsonii FI9785]
          Length = 239

 Score = 36.7 bits (84), Expect = 6.8,   Method: Composition-based stats.
 Identities = 8/44 (18%), Positives = 22/44 (50%), Gaps = 1/44 (2%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           L  +I +AG   S  +A + + +  + +N   ++    +++ +D
Sbjct: 5   LQKVIAQAG-VASRRKAEKMISAGQVTVNGKKVTELGTKVEPRD 47


>gi|22537733|ref|NP_688584.1| ribosomal large subunit pseudouridine synthase B [Streptococcus
           agalactiae 2603V/R]
 gi|76787925|ref|YP_330211.1| ribosomal large subunit pseudouridine synthase B [Streptococcus
           agalactiae A909]
 gi|76799444|ref|ZP_00781590.1| ribosomal large subunit pseudouridine synthase B [Streptococcus
           agalactiae 18RS21]
 gi|77406891|ref|ZP_00783916.1| ribosomal large subunit pseudouridine synthase B [Streptococcus
           agalactiae H36B]
 gi|77409463|ref|ZP_00786156.1| ribosomal large subunit pseudouridine synthase B [Streptococcus
           agalactiae COH1]
 gi|77412369|ref|ZP_00788680.1| ribosomal large subunit pseudouridine synthase B [Streptococcus
           agalactiae CJB111]
 gi|22534623|gb|AAN00457.1|AE014264_12 ribosomal large subunit pseudouridine synthase B [Streptococcus
           agalactiae 2603V/R]
 gi|76562982|gb|ABA45566.1| ribosomal large subunit pseudouridine synthase B [Streptococcus
           agalactiae A909]
 gi|76585200|gb|EAO61812.1| ribosomal large subunit pseudouridine synthase B [Streptococcus
           agalactiae 18RS21]
 gi|77161589|gb|EAO72589.1| ribosomal large subunit pseudouridine synthase B [Streptococcus
           agalactiae CJB111]
 gi|77171930|gb|EAO75106.1| ribosomal large subunit pseudouridine synthase B [Streptococcus
           agalactiae COH1]
 gi|77174500|gb|EAO77344.1| ribosomal large subunit pseudouridine synthase B [Streptococcus
           agalactiae H36B]
 gi|319745532|gb|EFV97834.1| ribosomal large subunit pseudouridine synthase B [Streptococcus
           agalactiae ATCC 13813]
          Length = 240

 Score = 36.7 bits (84), Expect = 6.8,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 1/41 (2%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
           I  AG A S  +A   +K   + IN  +++    Q+K  D 
Sbjct: 7   IAHAGIA-SRRKAEELIKQGMVTINGQVVNELATQVKAGDL 46


>gi|324309734|gb|ADY18515.1| ribosomal protein S4 [Phaeodactylum tricornutum]
          Length = 249

 Score = 36.7 bits (84), Expect = 6.9,   Method: Composition-based stats.
 Identities = 8/55 (14%), Positives = 23/55 (41%), Gaps = 2/55 (3%)

Query: 341 ISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           +   +    + ++  + +A F  S   AR+ +    + +N   I ++   ++  D
Sbjct: 125 LPLKKFESRLDIV--LHRAKFVFSIKAARQLIVHGNVYVNQVKIKSKSHILRPGD 177


>gi|322695401|gb|EFY87210.1| 30S ribosomal subunit S4, putative [Metarhizium acridum CQMa 102]
          Length = 525

 Score = 36.7 bits (84), Expect = 6.9,   Method: Composition-based stats.
 Identities = 10/35 (28%), Positives = 19/35 (54%)

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           FA+S  +AR+ +   A+K+N   + +   Q+   D
Sbjct: 165 FASSVRQARQFVIHGAVKVNGKKMVHPSYQLNPGD 199


>gi|295116055|emb|CBL36902.1| tryptophanyl-tRNA synthetase [butyrate-producing bacterium SM4/1]
          Length = 378

 Score = 36.7 bits (84), Expect = 6.9,   Method: Composition-based stats.
 Identities = 39/266 (14%), Positives = 75/266 (28%), Gaps = 50/266 (18%)

Query: 28  DILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL----MGGGTSIIGD 83
                 G  T + G   T + L  G+    +   W+  +           M   T     
Sbjct: 42  RKHMLDGKKTLFSGMQATGN-LTLGNYLGALK-NWVTISDEYQTFFSVVDMHSITVRQDP 99

Query: 84  PSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLRE 143
              R  +R ++    I   ++  K               A +LN  T++  +  +   ++
Sbjct: 100 AELRKRARNLLTLY-IAAGLDPEKNCIYYQSHVSGHAELAWILNCFTYMGELNRMTQFKD 158

Query: 144 IGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQW 203
             +  + N                 ++   F Y +L A D +     Y   +   G DQ 
Sbjct: 159 KAAKHADN-----------------INAGLFTYPVLMAADILL----YQADVVPVGIDQM 197

Query: 204 GNIICGIDLGERLKTPKLFALTSP-LLTTASG----------TKMGKTLSGAIWLNKEMT 252
            ++    D+  R         T P      +G           KM K+       ++   
Sbjct: 198 QHLELTRDIAIRFNNIYGDVFTVPEAYIGKAGAKIMSLQDPAKKMSKS-------DENPN 250

Query: 253 SPYNFWQYWRNIDDADVVSFAKRLTT 278
                  Y  +  D  +  F + +T 
Sbjct: 251 GSI----YLMDDPDTIIRKFKRAVTD 272


>gi|227549324|ref|ZP_03979373.1| 16S rRNA uridine-516 pseudouridylate synthase [Corynebacterium
           lipophiloflavum DSM 44291]
 gi|227078643|gb|EEI16606.1| 16S rRNA uridine-516 pseudouridylate synthase [Corynebacterium
           lipophiloflavum DSM 44291]
          Length = 295

 Score = 36.7 bits (84), Expect = 6.9,   Method: Composition-based stats.
 Identities = 8/53 (15%), Positives = 24/53 (45%), Gaps = 1/53 (1%)

Query: 342 SKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
            K   + G+ L  ++ +AG   S   A   +    +++N + ++ + +++   
Sbjct: 47  DKKPATEGVRLQKVLAQAG-VASRRHAEIMITQGRVEVNGTRVTTQGMRVDPS 98


>gi|149277497|ref|ZP_01883638.1| 23S rRNA pseudouridine synthase [Pedobacter sp. BAL39]
 gi|149231730|gb|EDM37108.1| 23S rRNA pseudouridine synthase [Pedobacter sp. BAL39]
          Length = 329

 Score = 36.7 bits (84), Expect = 6.9,   Method: Composition-based stats.
 Identities = 7/28 (25%), Positives = 13/28 (46%), Gaps = 1/28 (3%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSI 383
           I ++G   S   A R+++   + IN   
Sbjct: 12  ISESGLC-SRRAADRYIEQGNVYINGKK 38


>gi|323440850|gb|EGA98558.1| tryptophanyl-tRNA synthetase [Staphylococcus aureus O11]
 gi|323443861|gb|EGB01473.1| tryptophanyl-tRNA synthetase [Staphylococcus aureus O46]
          Length = 329

 Score = 36.7 bits (84), Expect = 6.9,   Method: Composition-based stats.
 Identities = 38/198 (19%), Positives = 69/198 (34%), Gaps = 35/198 (17%)

Query: 140 LLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGG 199
           +L  I S   + RM  ++    +         L   Y  L A D V     Y+  +   G
Sbjct: 92  MLTTIASVGELERMTQYKDKAQKAVEGIPAGLL--TYPPLMAADIVL----YNTNIVPVG 145

Query: 200 SDQWGNIICGIDLGERLKTPKLFALTSPLL--TTASGT---------KMGKTLSGAIWLN 248
            DQ  +I    +L +R  +     L  P +      G          KM K+   A    
Sbjct: 146 DDQKQHIELTRNLVDRFNSRYNDVLVKPEIRMPKVGGRVMSLQDPTRKMSKSDDNAKNFI 205

Query: 249 KEMTSPYNFWQYWRN-IDDAD---------------VVSFAKRLTTLPMSEIDRMAKLQG 292
             +  P    +  ++ + D+D               ++S    LT +P+ +I+  AK +G
Sbjct: 206 SLLDEPNVAAKKIKSAVTDSDGIIKFDRDKKPGITNLISIYAGLTDMPIKDIE--AKYEG 263

Query: 293 KEINEAKKIIATEITTMV 310
           +   + K  +A  +   +
Sbjct: 264 EGYGKFKGDLAEIVKAFL 281


>gi|325104842|ref|YP_004274496.1| SSU ribosomal protein S4P [Pedobacter saltans DSM 12145]
 gi|324973690|gb|ADY52674.1| SSU ribosomal protein S4P [Pedobacter saltans DSM 12145]
          Length = 202

 Score = 36.7 bits (84), Expect = 6.9,   Method: Composition-based stats.
 Identities = 10/82 (12%), Positives = 29/82 (35%), Gaps = 3/82 (3%)

Query: 320 ATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKI 379
                  F  +     +   ++ +   +R   ++    + G AT+ + AR+ +    I +
Sbjct: 66  EKQFSNLFKKASAKGGIAGTNLLQLLEARLDNVVY---RLGIATTRSAARQLVSHRHILV 122

Query: 380 NNSIISNEKLQIKLQDFDSTGN 401
           N  +++     ++  D      
Sbjct: 123 NGELVNIPSFSVRPGDVIEVRE 144


>gi|291548766|emb|CBL25028.1| Uncharacterized conserved protein [Ruminococcus torques L2-14]
          Length = 71

 Score = 36.7 bits (84), Expect = 6.9,   Method: Composition-based stats.
 Identities = 7/33 (21%), Positives = 15/33 (45%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNS 382
           + L   +  AG   S  EA+  +++  + +N  
Sbjct: 13  IKLGQALKAAGLVESGVEAKDVIQNGLVLVNGE 45


>gi|300361572|ref|ZP_07057749.1| ribosomal large subunit pseudouridine synthase B [Lactobacillus
           gasseri JV-V03]
 gi|300354191|gb|EFJ70062.1| ribosomal large subunit pseudouridine synthase B [Lactobacillus
           gasseri JV-V03]
          Length = 244

 Score = 36.7 bits (84), Expect = 6.9,   Method: Composition-based stats.
 Identities = 9/44 (20%), Positives = 21/44 (47%), Gaps = 1/44 (2%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           L  +I +AG   S  +A + + +  + +N   I+    +++  D
Sbjct: 10  LQKVIAQAG-VASRRKAEKMITAGQVTVNGKRITELGTKVEPSD 52


>gi|227503700|ref|ZP_03933749.1| possible hemolysin A [Corynebacterium accolens ATCC 49725]
 gi|227075736|gb|EEI13699.1| possible hemolysin A [Corynebacterium accolens ATCC 49725]
          Length = 268

 Score = 36.7 bits (84), Expect = 6.9,   Method: Composition-based stats.
 Identities = 11/58 (18%), Positives = 25/58 (43%), Gaps = 8/58 (13%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSI------ISNEKLQIKLQDFDSTGNIKLSFG 407
           +V+   A S  +AR  +KS  + +          + + ++ IK+++ +       S G
Sbjct: 12  LVRRKIARSREQAREMIKSGRVTVGGFKAEKPATVVDPEVSIKVEESEEDKWA--SRG 67


>gi|170758853|ref|YP_001788647.1| tryptophanyl-tRNA synthetase [Clostridium botulinum A3 str. Loch
           Maree]
 gi|169405842|gb|ACA54253.1| tryptophan--tRNA ligase [Clostridium botulinum A3 str. Loch Maree]
          Length = 332

 Score = 36.7 bits (84), Expect = 6.9,   Method: Composition-based stats.
 Identities = 39/186 (20%), Positives = 66/186 (35%), Gaps = 40/186 (21%)

Query: 152 RMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGID 211
           RM  ++    R    +S+S     Y +L A D +     Y+  L   G DQ  ++    D
Sbjct: 108 RMTQYKDKSQRY--GESVSAGLLTYPVLMAADILL----YNTDLVPVGKDQKQHLEITRD 161

Query: 212 LGERLKT--PKLFALTSPLLTTASG---------TKMGKTLSG---AIWLNKEMTSPYNF 257
           L +R        F +  P +  A            KM K+       I +   M  P   
Sbjct: 162 LAQRFNNLYSPTFKIPEPYIPEAGAKIMDLQDPTKKMSKSSDNENSYILI---MDPPDAI 218

Query: 258 WQYW-RNIDDAD-VVSF-------------AKRLTTLPMSEIDRMAKLQGKEINEAKKII 302
            +   R + D+  +V +                +T + M EI++  K +GK   + K  +
Sbjct: 219 RRKINRCVTDSLGIVKYTDEQPGIKNLMTILNTITGMAMEEIEK--KYEGKGYAQFKNDV 276

Query: 303 ATEITT 308
           A  I +
Sbjct: 277 AEAIIS 282


>gi|163867551|ref|YP_001608750.1| ribosomal large subunit pseudouridine synthase B [Bartonella
           tribocorum CIP 105476]
 gi|161017197|emb|CAK00755.1| ribosomal large subunit pseudouridine synthase B [Bartonella
           tribocorum CIP 105476]
          Length = 466

 Score = 36.7 bits (84), Expect = 6.9,   Method: Composition-based stats.
 Identities = 7/54 (12%), Positives = 21/54 (38%), Gaps = 1/54 (1%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
           E +    +   + +AG   S  +A   + +  + +N ++++     +   D   
Sbjct: 3   ENNESERIAKRLARAG-VASRRDAEMMIVAGRVSVNGTVVTTPAFNVSRSDVIK 55


>gi|163786165|ref|ZP_02180613.1| 30S ribosomal protein S4 [Flavobacteriales bacterium ALC-1]
 gi|159878025|gb|EDP72081.1| 30S ribosomal protein S4 [Flavobacteriales bacterium ALC-1]
          Length = 201

 Score = 36.7 bits (84), Expect = 6.9,   Method: Composition-based stats.
 Identities = 16/116 (13%), Positives = 39/116 (33%), Gaps = 10/116 (8%)

Query: 290 LQGKEINEAKKIIATEITTMVHGREEAEK----AATAAMECFDMSIHSQHMPTISISKDE 345
             G      KK   +E    +  +++A+             F  +  +Q + T  +    
Sbjct: 35  QHGANKRRGKK---SEYAIQLMEKQKAKYTYGVLEKQFRNMFKRATAAQGI-TGEVLLQL 90

Query: 346 VSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
               +    ++ + G + + + AR+ +    I +N   ++    Q+K  D      
Sbjct: 91  CESRLD--NVVFRMGVSPTRSGARQLVSHRHITVNGEKVNVPSYQLKAGDVVGVRE 144


>gi|115443574|ref|YP_778593.1| 30S ribosomal protein S4 [Bigelowiella natans]
 gi|122233787|sp|Q06J34|RR4_BIGNA RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|110810219|gb|ABG91425.1| 30S ribosomal protein S4 [Bigelowiella natans]
          Length = 194

 Score = 36.7 bits (84), Expect = 6.9,   Method: Composition-based stats.
 Identities = 12/56 (21%), Positives = 20/56 (35%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLS 405
           M L TL+ + GF  +   AR+ +    I +N   +        + D        L 
Sbjct: 84  MRLDTLLYRTGFVPTVASARQLISHGHINVNGKKVDIPGFNCSISDKIVINKEILK 139


>gi|15966478|ref|NP_386831.1| putative ribosomal large subunit pseudouridine synthase protein
           [Sinorhizobium meliloti 1021]
 gi|307300485|ref|ZP_07580265.1| pseudouridine synthase, RluA family [Sinorhizobium meliloti BL225C]
 gi|307318350|ref|ZP_07597785.1| pseudouridine synthase, RluA family [Sinorhizobium meliloti AK83]
 gi|15075749|emb|CAC47304.1| Putative ribosomal large subunit pseudouridine synthase
           [Sinorhizobium meliloti 1021]
 gi|306896032|gb|EFN26783.1| pseudouridine synthase, RluA family [Sinorhizobium meliloti AK83]
 gi|306904651|gb|EFN35235.1| pseudouridine synthase, RluA family [Sinorhizobium meliloti BL225C]
          Length = 343

 Score = 36.7 bits (84), Expect = 6.9,   Method: Composition-based stats.
 Identities = 7/32 (21%), Positives = 16/32 (50%)

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           S N  +  ++  A+ IN + ++  K ++   D
Sbjct: 38  SRNRIKSLIEQGAVSINGATVTEPKRKVHPGD 69


>gi|66818983|ref|XP_643151.1| hypothetical protein DDB_G0276449 [Dictyostelium discoideum AX4]
 gi|60471215|gb|EAL69178.1| hypothetical protein DDB_G0276449 [Dictyostelium discoideum AX4]
          Length = 401

 Score = 36.7 bits (84), Expect = 6.9,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 26/55 (47%), Gaps = 3/55 (5%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD--STGNIKL 404
           +  ++ +AG A S  +A   +    +K+N  II  E++ +K  D        IK+
Sbjct: 140 IQKILARAGIA-SRRKAEELIIDGRVKVNGKIIKMEEILVKPHDIITVDDKPIKV 193


>gi|329118620|ref|ZP_08247324.1| 30S ribosomal protein S4 [Neisseria bacilliformis ATCC BAA-1200]
 gi|327465355|gb|EGF11636.1| 30S ribosomal protein S4 [Neisseria bacilliformis ATCC BAA-1200]
          Length = 118

 Score = 36.7 bits (84), Expect = 7.0,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 21/42 (50%)

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
           GF ++  EAR+ +   A+ +N  +++    Q+K  D  +   
Sbjct: 18  GFGSTRAEARQLVSHKAVTVNGQVVNIPSYQVKAGDVVAVRE 59


>gi|257435947|ref|ZP_05611994.1| tryptophanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           M876]
 gi|257284229|gb|EEV14349.1| tryptophanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           M876]
          Length = 328

 Score = 36.7 bits (84), Expect = 7.0,   Method: Composition-based stats.
 Identities = 38/198 (19%), Positives = 69/198 (34%), Gaps = 35/198 (17%)

Query: 140 LLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGG 199
           +L  I S   + RM  ++    +         L   Y  L A D V     Y+  +   G
Sbjct: 92  MLTTIASVGELERMTQYKDKAQKAVEGIPAGLL--TYPPLMAADIVL----YNTNIVPVG 145

Query: 200 SDQWGNIICGIDLGERLKTPKLFALTSPLL--TTASGT---------KMGKTLSGAIWLN 248
            DQ  +I    +L +R  +     L  P +      G          KM K+   A    
Sbjct: 146 DDQKQHIELTRNLVDRFNSRYNDVLVKPEIRMPKVGGRVMSLQDPTRKMSKSDDNAKNFI 205

Query: 249 KEMTSPYNFWQYWRN-IDDAD---------------VVSFAKRLTTLPMSEIDRMAKLQG 292
             +  P    +  ++ + D+D               ++S    LT +P+ +I+  AK +G
Sbjct: 206 SLLDEPNVAAKKIKSAVTDSDGIIKFDRDNKPGITNLISIYAGLTDMPIKDIE--AKYEG 263

Query: 293 KEINEAKKIIATEITTMV 310
           +   + K  +A  +   +
Sbjct: 264 EGYGKFKGDLAEIVKAFL 281


>gi|224373704|ref|YP_002608076.1| 30S ribosomal protein S4 [Nautilia profundicola AmH]
 gi|254764602|sp|B9L6T8|RS4_NAUPA RecName: Full=30S ribosomal protein S4
 gi|223590010|gb|ACM93746.1| ribosomal protein S4 [Nautilia profundicola AmH]
          Length = 208

 Score = 36.7 bits (84), Expect = 7.0,   Method: Composition-based stats.
 Identities = 13/70 (18%), Positives = 27/70 (38%), Gaps = 8/70 (11%)

Query: 340 SISKDEVSRGMGLLTLI--------VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQI 391
             ++ E + G  L+ L+         + GFA++   AR+ +    I +N   ++     +
Sbjct: 80  EANRQEGNTGENLIKLLERRLDNVVYRMGFASTRRFARQLVTHGHILVNGKKVNIPSYLV 139

Query: 392 KLQDFDSTGN 401
           K  D      
Sbjct: 140 KEGDRIEIRE 149


>gi|162456220|ref|YP_001618587.1| 30S ribosomal protein S4 [Sorangium cellulosum 'So ce 56']
 gi|161166802|emb|CAN98107.1| 30S ribosomal protein S4 [Sorangium cellulosum 'So ce 56']
          Length = 209

 Score = 36.7 bits (84), Expect = 7.0,   Method: Composition-based stats.
 Identities = 8/36 (22%), Positives = 17/36 (47%)

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           GF +S  EAR+ ++   + +N   +      ++  D
Sbjct: 108 GFGSSRAEARQLVRHGHVHVNGKRLDIPSYVVRAGD 143


>gi|83319396|ref|YP_424373.1| isoleucyl-tRNA synthetase [Mycoplasma capricolum subsp. capricolum
           ATCC 27343]
 gi|83283282|gb|ABC01214.1| isoleucyl-tRNA synthetase [Mycoplasma capricolum subsp. capricolum
           ATCC 27343]
          Length = 908

 Score = 36.7 bits (84), Expect = 7.0,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 40/123 (32%), Gaps = 26/123 (21%)

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQS-LSFLEFNYMILQAYDFVELAK 189
           W   +   + L +     S+ +    +++        S ++  E  Y  LQA        
Sbjct: 500 WFS-LDADEFLPDEYKNKSLRK--EKDTLDVWFDSGSSSIALSE-KYPKLQAP------- 548

Query: 190 NYDCRLQMGGSDQ---WGNIICGIDLG----ERLKTPKLFALTSPLLTTASGTKMGKTLS 242
            YD  L+  G+DQ   W N               +      +T    T   G KM K+L 
Sbjct: 549 -YDIYLE--GNDQYRGWFNASMINSTIYANKSPYRQLVSHGMT----TDEKGNKMSKSLG 601

Query: 243 GAI 245
             +
Sbjct: 602 NGV 604


>gi|49483159|ref|YP_040383.1| tryptophanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|257425047|ref|ZP_05601473.1| tryptophanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257427711|ref|ZP_05604109.1| tryptophanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257430346|ref|ZP_05606728.1| tryptophanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257433050|ref|ZP_05609408.1| tryptophanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           E1410]
 gi|282903543|ref|ZP_06311431.1| tryptophan--tRNA ligase [Staphylococcus aureus subsp. aureus C160]
 gi|282905317|ref|ZP_06313172.1| tryptophanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282910574|ref|ZP_06318377.1| tryptophanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282913770|ref|ZP_06321557.1| tryptophan--tRNA ligase [Staphylococcus aureus subsp. aureus M899]
 gi|282918695|ref|ZP_06326430.1| tryptophanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           C427]
 gi|282923803|ref|ZP_06331479.1| tryptophanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           C101]
 gi|283957740|ref|ZP_06375191.1| tryptophan--tRNA ligase [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|293500808|ref|ZP_06666659.1| tryptophanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           58-424]
 gi|293526349|ref|ZP_06671034.1| tryptophan--tRNA ligase [Staphylococcus aureus subsp. aureus M1015]
 gi|295427485|ref|ZP_06820117.1| tryptophanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|297591566|ref|ZP_06950204.1| tryptophan--tRNA ligase [Staphylococcus aureus subsp. aureus MN8]
 gi|56749420|sp|Q6GI89|SYW_STAAR RecName: Full=Tryptophanyl-tRNA synthetase; AltName:
           Full=Tryptophan--tRNA ligase; Short=TrpRS
 gi|49241288|emb|CAG39969.1| putative tryptophanyl-tRNA synthetase [Staphylococcus aureus subsp.
           aureus MRSA252]
 gi|257272023|gb|EEV04155.1| tryptophanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257274552|gb|EEV06039.1| tryptophanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257278474|gb|EEV09093.1| tryptophanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257281143|gb|EEV11280.1| tryptophanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           E1410]
 gi|282313775|gb|EFB44167.1| tryptophanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           C101]
 gi|282316505|gb|EFB46879.1| tryptophanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           C427]
 gi|282321838|gb|EFB52162.1| tryptophan--tRNA ligase [Staphylococcus aureus subsp. aureus M899]
 gi|282325179|gb|EFB55488.1| tryptophanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282330609|gb|EFB60123.1| tryptophanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282595161|gb|EFC00125.1| tryptophan--tRNA ligase [Staphylococcus aureus subsp. aureus C160]
 gi|283789889|gb|EFC28706.1| tryptophan--tRNA ligase [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|290920421|gb|EFD97484.1| tryptophan--tRNA ligase [Staphylococcus aureus subsp. aureus M1015]
 gi|291095813|gb|EFE26074.1| tryptophanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           58-424]
 gi|295127843|gb|EFG57477.1| tryptophanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|297576452|gb|EFH95168.1| tryptophan--tRNA ligase [Staphylococcus aureus subsp. aureus MN8]
 gi|312438631|gb|ADQ77702.1| tryptophan--tRNA ligase [Staphylococcus aureus subsp. aureus TCH60]
 gi|315193656|gb|EFU24051.1| tryptophanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           CGS00]
          Length = 329

 Score = 36.7 bits (84), Expect = 7.0,   Method: Composition-based stats.
 Identities = 38/198 (19%), Positives = 69/198 (34%), Gaps = 35/198 (17%)

Query: 140 LLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGG 199
           +L  I S   + RM  ++    +         L   Y  L A D V     Y+  +   G
Sbjct: 92  MLTTIASVGELERMTQYKDKAQKAVEGIPAGLL--TYPPLMAADIVL----YNTNIVPVG 145

Query: 200 SDQWGNIICGIDLGERLKTPKLFALTSPLL--TTASGT---------KMGKTLSGAIWLN 248
            DQ  +I    +L +R  +     L  P +      G          KM K+   A    
Sbjct: 146 DDQKQHIELTRNLVDRFNSRYNDVLVKPEIRMPKVGGRVMSLQDPTRKMSKSDDNAKNFI 205

Query: 249 KEMTSPYNFWQYWRN-IDDAD---------------VVSFAKRLTTLPMSEIDRMAKLQG 292
             +  P    +  ++ + D+D               ++S    LT +P+ +I+  AK +G
Sbjct: 206 SLLDEPNVAAKKIKSAVTDSDGIIKFDRDNKPGITNLISIYAGLTDMPIKDIE--AKYEG 263

Query: 293 KEINEAKKIIATEITTMV 310
           +   + K  +A  +   +
Sbjct: 264 EGYGKFKGDLAEIVKAFL 281


>gi|15923986|ref|NP_371520.1| tryptophanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Mu50]
 gi|15926585|ref|NP_374118.1| tryptophanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           N315]
 gi|21282607|ref|NP_645695.1| tryptophanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MW2]
 gi|49485772|ref|YP_042993.1| tryptophanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|57650189|ref|YP_185869.1| tryptophanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           COL]
 gi|82750609|ref|YP_416350.1| tryptophanyl-tRNA synthetase [Staphylococcus aureus RF122]
 gi|87160620|ref|YP_493597.1| tryptophanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|88194690|ref|YP_499486.1| tryptophanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           NCTC 8325]
 gi|148267429|ref|YP_001246372.1| tryptophanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           JH9]
 gi|150393482|ref|YP_001316157.1| tryptophanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           JH1]
 gi|151221078|ref|YP_001331900.1| tryptophanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           str. Newman]
 gi|156979322|ref|YP_001441581.1| tryptophanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Mu3]
 gi|161509195|ref|YP_001574854.1| tryptophanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|253731603|ref|ZP_04865768.1| tryptophanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|253732646|ref|ZP_04866811.1| tryptophanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           TCH130]
 gi|255005785|ref|ZP_05144386.2| tryptophanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Mu50-omega]
 gi|257795270|ref|ZP_05644249.1| tryptophanyl-tRNA synthetase [Staphylococcus aureus A9781]
 gi|258406919|ref|ZP_05680072.1| tryptophanyl-tRNA synthetase [Staphylococcus aureus A9763]
 gi|258421887|ref|ZP_05684808.1| tryptophanyl-tRNA synthetase [Staphylococcus aureus A9719]
 gi|258435285|ref|ZP_05689024.1| tryptophanyl-tRNA synthetase [Staphylococcus aureus A9299]
 gi|258441497|ref|ZP_05690857.1| tryptophanyl-tRNA synthetase [Staphylococcus aureus A8115]
 gi|258447195|ref|ZP_05695344.1| tryptophanyl-tRNA synthetase [Staphylococcus aureus A6300]
 gi|258449955|ref|ZP_05698053.1| tryptophanyl-tRNA synthetase [Staphylococcus aureus A6224]
 gi|258452053|ref|ZP_05700069.1| tryptophanyl-tRNA synthetase [Staphylococcus aureus A5948]
 gi|258455051|ref|ZP_05703014.1| tryptophanyl-tRNA synthetase [Staphylococcus aureus A5937]
 gi|262049344|ref|ZP_06022218.1| tryptophanyl-tRNA synthetase [Staphylococcus aureus D30]
 gi|269202609|ref|YP_003281878.1| tryptophanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           ED98]
 gi|282894022|ref|ZP_06302253.1| tryptophanyl-tRNA synthetase [Staphylococcus aureus A8117]
 gi|282923675|ref|ZP_06331354.1| tryptophanyl-tRNA synthetase [Staphylococcus aureus A9765]
 gi|282927218|ref|ZP_06334840.1| tryptophanyl-tRNA synthetase [Staphylococcus aureus A10102]
 gi|284023922|ref|ZP_06378320.1| tryptophanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           132]
 gi|294847982|ref|ZP_06788729.1| tryptophanyl-tRNA synthetase [Staphylococcus aureus A9754]
 gi|295405800|ref|ZP_06815609.1| tryptophanyl-tRNA synthetase [Staphylococcus aureus A8819]
 gi|296276128|ref|ZP_06858635.1| tryptophanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MR1]
 gi|297208370|ref|ZP_06924800.1| tryptophan--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|297245391|ref|ZP_06929262.1| tryptophanyl-tRNA synthetase [Staphylococcus aureus A8796]
 gi|300912446|ref|ZP_07129889.1| tryptophan--tRNA ligase [Staphylococcus aureus subsp. aureus TCH70]
 gi|304381450|ref|ZP_07364101.1| tryptophan--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|54039697|sp|P67593|SYW_STAAN RecName: Full=Tryptophanyl-tRNA synthetase; AltName:
           Full=Tryptophan--tRNA ligase; Short=TrpRS
 gi|54039698|sp|P67594|SYW_STAAW RecName: Full=Tryptophanyl-tRNA synthetase; AltName:
           Full=Tryptophan--tRNA ligase; Short=TrpRS
 gi|54042054|sp|P67592|SYW_STAAM RecName: Full=Tryptophanyl-tRNA synthetase; AltName:
           Full=Tryptophan--tRNA ligase; Short=TrpRS
 gi|56749391|sp|Q6GAT0|SYW_STAAS RecName: Full=Tryptophanyl-tRNA synthetase; AltName:
           Full=Tryptophan--tRNA ligase; Short=TrpRS
 gi|71153578|sp|Q5HH88|SYW_STAAC RecName: Full=Tryptophanyl-tRNA synthetase; AltName:
           Full=Tryptophan--tRNA ligase; Short=TrpRS
 gi|13700800|dbj|BAB42096.1| tryptophanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           N315]
 gi|14246766|dbj|BAB57158.1| tryptophanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Mu50]
 gi|21204045|dbj|BAB94743.1| tryptophanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MW2]
 gi|49244215|emb|CAG42641.1| putative tryptophanyl-tRNA synthetase [Staphylococcus aureus subsp.
           aureus MSSA476]
 gi|57284375|gb|AAW36469.1| tryptophanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           COL]
 gi|82656140|emb|CAI80551.1| tryptophanyl-tRNA synthetase [Staphylococcus aureus RF122]
 gi|87126594|gb|ABD21108.1| tryptophanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|87202248|gb|ABD30058.1| tryptophanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           NCTC 8325]
 gi|147740498|gb|ABQ48796.1| tryptophanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           JH9]
 gi|149945934|gb|ABR51870.1| tryptophanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           JH1]
 gi|150373878|dbj|BAF67138.1| tryptophanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           str. Newman]
 gi|156721457|dbj|BAF77874.1| tryptophanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Mu3]
 gi|160368004|gb|ABX28975.1| tryptophan--tRNA ligase [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|253724602|gb|EES93331.1| tryptophanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|253729424|gb|EES98153.1| tryptophanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           TCH130]
 gi|257789242|gb|EEV27582.1| tryptophanyl-tRNA synthetase [Staphylococcus aureus A9781]
 gi|257841458|gb|EEV65899.1| tryptophanyl-tRNA synthetase [Staphylococcus aureus A9763]
 gi|257842220|gb|EEV66648.1| tryptophanyl-tRNA synthetase [Staphylococcus aureus A9719]
 gi|257848946|gb|EEV72929.1| tryptophanyl-tRNA synthetase [Staphylococcus aureus A9299]
 gi|257852287|gb|EEV76213.1| tryptophanyl-tRNA synthetase [Staphylococcus aureus A8115]
 gi|257853943|gb|EEV76897.1| tryptophanyl-tRNA synthetase [Staphylococcus aureus A6300]
 gi|257856875|gb|EEV79778.1| tryptophanyl-tRNA synthetase [Staphylococcus aureus A6224]
 gi|257860268|gb|EEV83100.1| tryptophanyl-tRNA synthetase [Staphylococcus aureus A5948]
 gi|257862931|gb|EEV85696.1| tryptophanyl-tRNA synthetase [Staphylococcus aureus A5937]
 gi|259162576|gb|EEW47144.1| tryptophanyl-tRNA synthetase [Staphylococcus aureus D30]
 gi|262074899|gb|ACY10872.1| tryptophanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           ED98]
 gi|269940496|emb|CBI48873.1| putative tryptophanyl-tRNA synthetase [Staphylococcus aureus subsp.
           aureus TW20]
 gi|282590907|gb|EFB95982.1| tryptophanyl-tRNA synthetase [Staphylococcus aureus A10102]
 gi|282593061|gb|EFB98061.1| tryptophanyl-tRNA synthetase [Staphylococcus aureus A9765]
 gi|282763508|gb|EFC03637.1| tryptophanyl-tRNA synthetase [Staphylococcus aureus A8117]
 gi|283470208|emb|CAQ49419.1| tryptophanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           ST398]
 gi|285816675|gb|ADC37162.1| Tryptophanyl-tRNA synthetase; proteobacterial type [Staphylococcus
           aureus 04-02981]
 gi|294824782|gb|EFG41204.1| tryptophanyl-tRNA synthetase [Staphylococcus aureus A9754]
 gi|294969235|gb|EFG45255.1| tryptophanyl-tRNA synthetase [Staphylococcus aureus A8819]
 gi|296887109|gb|EFH26012.1| tryptophan--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|297177694|gb|EFH36944.1| tryptophanyl-tRNA synthetase [Staphylococcus aureus A8796]
 gi|298694235|gb|ADI97457.1| tryptophanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           ED133]
 gi|300886692|gb|EFK81894.1| tryptophan--tRNA ligase [Staphylococcus aureus subsp. aureus TCH70]
 gi|302332607|gb|ADL22800.1| putative tryptophanyl-tRNA synthetase [Staphylococcus aureus subsp.
           aureus JKD6159]
 gi|304340023|gb|EFM05966.1| tryptophan--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|312829392|emb|CBX34234.1| tryptophanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           ECT-R 2]
 gi|315130425|gb|EFT86412.1| tryptophanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           CGS03]
 gi|315197551|gb|EFU27887.1| tryptophanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           CGS01]
 gi|320141188|gb|EFW33035.1| tryptophan--tRNA ligase [Staphylococcus aureus subsp. aureus
           MRSA131]
 gi|320143245|gb|EFW35035.1| tryptophan--tRNA ligase [Staphylococcus aureus subsp. aureus
           MRSA177]
 gi|329313665|gb|AEB88078.1| Tryptophanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           T0131]
 gi|329728221|gb|EGG64660.1| tryptophan--tRNA ligase [Staphylococcus aureus subsp. aureus 21172]
 gi|329731105|gb|EGG67476.1| tryptophan--tRNA ligase [Staphylococcus aureus subsp. aureus 21189]
          Length = 329

 Score = 36.7 bits (84), Expect = 7.0,   Method: Composition-based stats.
 Identities = 38/198 (19%), Positives = 69/198 (34%), Gaps = 35/198 (17%)

Query: 140 LLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGG 199
           +L  I S   + RM  ++    +         L   Y  L A D V     Y+  +   G
Sbjct: 92  MLTTIASVGELERMTQYKDKAQKAVEGIPAGLL--TYPPLMAADIVL----YNTNIVPVG 145

Query: 200 SDQWGNIICGIDLGERLKTPKLFALTSPLL--TTASGT---------KMGKTLSGAIWLN 248
            DQ  +I    +L +R  +     L  P +      G          KM K+   A    
Sbjct: 146 DDQKQHIELTRNLVDRFNSRYNDVLVKPEIRMPKVGGRVMSLQDPTRKMSKSDDNAKNFI 205

Query: 249 KEMTSPYNFWQYWRN-IDDAD---------------VVSFAKRLTTLPMSEIDRMAKLQG 292
             +  P    +  ++ + D+D               ++S    LT +P+ +I+  AK +G
Sbjct: 206 SLLDEPNVAAKKIKSAVTDSDGIIKFDRDNKPGITNLISIYAGLTDMPIKDIE--AKYEG 263

Query: 293 KEINEAKKIIATEITTMV 310
           +   + K  +A  +   +
Sbjct: 264 EGYGKFKGDLAEIVKAFL 281


>gi|225174838|ref|ZP_03728835.1| pseudouridine synthase [Dethiobacter alkaliphilus AHT 1]
 gi|225169478|gb|EEG78275.1| pseudouridine synthase [Dethiobacter alkaliphilus AHT 1]
          Length = 242

 Score = 36.7 bits (84), Expect = 7.0,   Method: Composition-based stats.
 Identities = 8/59 (13%), Positives = 23/59 (38%), Gaps = 4/59 (6%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD---FDSTGNIKLS 405
           + L   +  AG   S     + ++S  + +N S ++   + +  ++         +K+ 
Sbjct: 3   IRLQKFLSMAGVC-SRRAGEKLIESGRVTVNGSRVTAMGVTVDPENDVVEVDGRRVKVQ 60


>gi|289209305|ref|YP_003461371.1| ribosomal protein S4 [Thioalkalivibrio sp. K90mix]
 gi|288944936|gb|ADC72635.1| ribosomal protein S4 [Thioalkalivibrio sp. K90mix]
          Length = 206

 Score = 36.7 bits (84), Expect = 7.0,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 29/63 (46%), Gaps = 8/63 (12%)

Query: 347 SRGMGLLTLI--------VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
           S G  LL L+         + GF ++ +EAR+ +   A+ +N  +++    Q++  D  S
Sbjct: 85  STGENLLKLLEGRLDNVVYRMGFGSTRSEARQLVSHRAVLVNGQVVNIAAYQVQPSDVVS 144

Query: 399 TGN 401
              
Sbjct: 145 IRE 147


>gi|220907729|ref|YP_002483040.1| photosystem II S4 domain-containing protein [Cyanothece sp. PCC
           7425]
 gi|219864340|gb|ACL44679.1| photosystem II S4 domain protein [Cyanothece sp. PCC 7425]
          Length = 259

 Score = 36.7 bits (84), Expect = 7.0,   Method: Composition-based stats.
 Identities = 17/71 (23%), Positives = 27/71 (38%), Gaps = 6/71 (8%)

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDST-GNIKLSFG---- 407
           L  I  AGF  S ++    + +  +++N   IS     +K  D  +  G  +L  G    
Sbjct: 186 LDAIASAGFGMSRSKMADLIAAGDVRVNWKDISQPSFTLKAGDLVAIRGKGRLEVGDVQV 245

Query: 408 -KKNHIICHLC 417
            KK      L 
Sbjct: 246 TKKERYRVQLT 256


>gi|167772309|ref|ZP_02444362.1| hypothetical protein ANACOL_03686 [Anaerotruncus colihominis DSM
           17241]
 gi|167665412|gb|EDS09542.1| hypothetical protein ANACOL_03686 [Anaerotruncus colihominis DSM
           17241]
          Length = 259

 Score = 36.7 bits (84), Expect = 7.0,   Method: Composition-based stats.
 Identities = 10/71 (14%), Positives = 26/71 (36%), Gaps = 4/71 (5%)

Query: 348 RGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFG 407
            G+ +  ++ + G   S  +A   +    + +N             +D  +   +++   
Sbjct: 11  NGIRIQKVLSENG-VMSRRKAEEAIAQGRVTVNGHPAQPGNPVDPARDVIAIDGVRVQLR 69

Query: 408 KKN---HIICH 415
           KK    +I+ H
Sbjct: 70  KKKQNVYIMLH 80


>gi|56808584|ref|ZP_00366315.1| COG1187: 16S rRNA uridine-516 pseudouridylate synthase and related
           pseudouridylate synthases [Streptococcus pyogenes M49
           591]
          Length = 109

 Score = 36.7 bits (84), Expect = 7.0,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 18/40 (45%), Gaps = 1/40 (2%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           I  AG A S  +A   +K   + +N  +I +    +K  D
Sbjct: 7   IAHAGIA-SRRKAEELIKQGLVTLNGQVIMDLATTVKSGD 45


>gi|323485703|ref|ZP_08091040.1| pseudouridine synthase [Clostridium symbiosum WAL-14163]
 gi|323400966|gb|EGA93327.1| pseudouridine synthase [Clostridium symbiosum WAL-14163]
          Length = 244

 Score = 36.7 bits (84), Expect = 7.1,   Method: Composition-based stats.
 Identities = 11/54 (20%), Positives = 20/54 (37%), Gaps = 1/54 (1%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG 400
             G+ L   + +AG   S  EA R ++   + ++    S        Q+    G
Sbjct: 11  DNGIRLNKYLSEAGIC-SRREADRLIEDGKVTVDGRTASMGMKVFTSQEITVNG 63


>gi|315646149|ref|ZP_07899269.1| ribosomal protein S4 [Paenibacillus vortex V453]
 gi|315278348|gb|EFU41664.1| ribosomal protein S4 [Paenibacillus vortex V453]
          Length = 200

 Score = 36.7 bits (84), Expect = 7.1,   Method: Composition-based stats.
 Identities = 10/82 (12%), Positives = 23/82 (28%), Gaps = 3/82 (3%)

Query: 320 ATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKI 379
                  F+ +   + +               L  L+ + GF+ S   AR+ +    + +
Sbjct: 65  EKQFKTLFNKATSMKGIAG---ENFMFLLESRLDNLVYRLGFSNSRAGARQLVAHGHVTV 121

Query: 380 NNSIISNEKLQIKLQDFDSTGN 401
           N   +      +   D      
Sbjct: 122 NGKKVDIASYAVSTGDVIGLRE 143


>gi|153832510|ref|ZP_01985177.1| tryptophanyl-tRNA synthetase [Vibrio harveyi HY01]
 gi|148871305|gb|EDL70177.1| tryptophanyl-tRNA synthetase [Vibrio harveyi HY01]
          Length = 340

 Score = 36.7 bits (84), Expect = 7.1,   Method: Composition-based stats.
 Identities = 36/218 (16%), Positives = 67/218 (30%), Gaps = 33/218 (15%)

Query: 45  TASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIE 104
           T   LH GH    +      ++ H    L+     +  +            S  I   + 
Sbjct: 20  TGP-LHLGHYVGSLQQRVALQSQHDQTILVADMQGLTDNAH-----NPSKVSSNILNVVA 73

Query: 105 KIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK 164
               +          +T   + +    L  +          +  S+ R+    +V++ ++
Sbjct: 74  DYLAVG-----IEPAQTTICLQSQVPALAELTMY-----YSNLVSIARLERNPTVKNEIQ 123

Query: 165 R---EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE---RLKT 218
               E+S+      Y I QA D       +   L   G DQ   +    ++      L  
Sbjct: 124 NKGFERSIPTGFLTYPISQAADI----TGFHATLVPVGDDQLPMLEQTNEIVRKINHLDG 179

Query: 219 PKLFALTSPLLTT------ASGT-KMGKTLSGAIWLNK 249
            ++     PLL+         G  KM K++  AI L  
Sbjct: 180 KEILKECRPLLSDAPRLPSTDGKNKMSKSMGNAINLGA 217


>gi|126734894|ref|ZP_01750640.1| lysyl-tRNA synthetase [Roseobacter sp. CCS2]
 gi|126715449|gb|EBA12314.1| lysyl-tRNA synthetase [Roseobacter sp. CCS2]
          Length = 522

 Score = 36.7 bits (84), Expect = 7.1,   Method: Composition-based stats.
 Identities = 18/84 (21%), Positives = 27/84 (32%), Gaps = 4/84 (4%)

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            DF       D   +M G +   N      + E L   K    +  L     G K+ K+ 
Sbjct: 236 PDFGARWAALDVDFEMYGKEHATNTAIYDRICEILGGKKPNHFSYELFLDEKGQKISKSS 295

Query: 242 SGAI----WLNKEMTSPYNFWQYW 261
              I    WL    T   +++ Y 
Sbjct: 296 GNGISIDEWLTYASTESLSYFMYL 319


>gi|323695091|ref|ZP_08109233.1| pseudouridine synthase [Clostridium symbiosum WAL-14673]
 gi|323500846|gb|EGB16766.1| pseudouridine synthase [Clostridium symbiosum WAL-14673]
          Length = 241

 Score = 36.7 bits (84), Expect = 7.2,   Method: Composition-based stats.
 Identities = 11/54 (20%), Positives = 20/54 (37%), Gaps = 1/54 (1%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG 400
             G+ L   + +AG   S  EA R ++   + ++    S        Q+    G
Sbjct: 8   DNGIRLNKYLSEAGIC-SRREADRLIEDGKVTVDGRTASMGMKVFTSQEITVNG 60


>gi|260901209|ref|ZP_05909604.1| tryptophan--tRNA ligase [Vibrio parahaemolyticus AQ4037]
 gi|308106693|gb|EFO44233.1| tryptophan--tRNA ligase [Vibrio parahaemolyticus AQ4037]
          Length = 340

 Score = 36.7 bits (84), Expect = 7.2,   Method: Composition-based stats.
 Identities = 36/218 (16%), Positives = 67/218 (30%), Gaps = 33/218 (15%)

Query: 45  TASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIE 104
           T   LH GH    +      ++ H    L+     +  +            S  I   + 
Sbjct: 20  TGP-LHLGHYVGSLQQRVALQSEHDQTILVADMQGLTDNAH-----NPSKVSSNILNVVA 73

Query: 105 KIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLK 164
               +          +T   + +    L  +          +  S+ R+    +V++ ++
Sbjct: 74  DYLAVG-----IDPIQTTICLQSQLPALAELTMY-----YSNLVSIARLERNPTVKNEIQ 123

Query: 165 R---EQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGE---RLKT 218
               E+S+      Y I QA D       +   L   G DQ   +    ++      L  
Sbjct: 124 SKGFERSIPAGFLTYPISQAADI----TGFRATLVPVGDDQLPMLEQTNEIVRKINDLGG 179

Query: 219 PKLFALTSPLLTT------ASGT-KMGKTLSGAIWLNK 249
            ++     PLL+         G  KM K++  AI L  
Sbjct: 180 QEILKECRPLLSDAPRLPSTDGKHKMSKSMGNAINLGA 217


>gi|300775038|ref|ZP_07084901.1| 30S ribosomal protein S4 [Chryseobacterium gleum ATCC 35910]
 gi|300506853|gb|EFK37988.1| 30S ribosomal protein S4 [Chryseobacterium gleum ATCC 35910]
          Length = 202

 Score = 36.7 bits (84), Expect = 7.2,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 44/124 (35%), Gaps = 15/124 (12%)

Query: 285 DRMAKLQGKEINE-AKK-----IIATEITTMV-HGREEAEKAATAAMECFDMSIHSQHMP 337
           ++     G      AKK      +A +      +G  E           FD +  S+ + 
Sbjct: 31  NQPPGQHGPNKRRGAKKSEYAVQLAEKQKAKYTYGILE-----RQFANLFDKAHRSKGVT 85

Query: 338 TISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
              + +   SR   ++    + GFA + + AR+ +    I +N  I++     +K  D  
Sbjct: 86  GEVLLQLCESRLDNVVY---RFGFAKTRSAARQLVSHRHITVNGEILNIPSYLVKAGDVI 142

Query: 398 STGN 401
           +   
Sbjct: 143 AVRE 146


>gi|149909594|ref|ZP_01898247.1| ribosomal large subunit pseudouridine synthase F [Moritella sp.
           PE36]
 gi|149807298|gb|EDM67251.1| ribosomal large subunit pseudouridine synthase F [Moritella sp.
           PE36]
          Length = 407

 Score = 36.7 bits (84), Expect = 7.2,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 16/41 (39%), Gaps = 7/41 (17%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNS------IISNEKLQ 390
           I   G+  S  EA R ++   + IN         +S+  + 
Sbjct: 15  ISDTGYC-SRREADRLIEQGRVTINGKIPEMGTKVSDGDMV 54


>gi|145590213|ref|YP_001156810.1| pseudouridine synthase [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
 gi|145048619|gb|ABP35246.1| ribosomal large subunit pseudouridine synthase F [Polynucleobacter
           necessarius subsp. asymbioticus QLW-P1DMWA-1]
          Length = 245

 Score = 36.7 bits (84), Expect = 7.2,   Method: Composition-based stats.
 Identities = 5/39 (12%), Positives = 18/39 (46%), Gaps = 1/39 (2%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIIS 385
              + +  L+ + G   S  EA  +++   + ++  +++
Sbjct: 2   EEKVRVSKLLSELGLC-SRREADSYIEQGLVTVDGEVVN 39


>gi|84997377|ref|XP_953410.1| tryptophan-tRNA synthetase [Theileria annulata strain Ankara]
 gi|65304406|emb|CAI76785.1| tryptophan-tRNA synthetase, putative [Theileria annulata]
          Length = 403

 Score = 36.7 bits (84), Expect = 7.2,   Method: Composition-based stats.
 Identities = 39/291 (13%), Positives = 87/291 (29%), Gaps = 42/291 (14%)

Query: 41  GYDLTASSLHAGHLTQ-LMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           G   T   +H G+    +      QK       ++    +I G          +  +  +
Sbjct: 59  GIQPTGE-IHIGNYIGCISPCLKYQKLHSDLNVMIADNHAISG----------LKSNDNL 107

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
           ++ I       S        KT   + +    +  + ++     +GS     +       
Sbjct: 108 KKYIRSTIA-LSIASGINPEKTRIFVQSQFPQILELNWL-----LGSVVRTGKFYKIAQF 161

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNII----CGIDLGER 215
           R+R  +    +   F Y +L + D   L  +      + G DQ  ++         L   
Sbjct: 162 RNRQIKVSKENLATFLYPLLMSSDIFALNASSI----IAGPDQRIHLTLARYVARKLNRY 217

Query: 216 LKTP----KLF--ALTSPLLTTASG-TKMGKTLSGAIWLNKEMTSPYNFWQYWRN---ID 265
           L T            T  + + ++G  KM K+          + +  + ++  +N     
Sbjct: 218 LDTNYFIVPQMVKGFTYKVKSLSNGRKKMSKSSELKYDTINMLDTDDDIYRKIKNAKTQS 277

Query: 266 DADVV-----SFAKRLTTLPMSEIDRMAKLQG-KEINEAKKIIATEITTMV 310
             DV+     +     +         + K     ++ + K  +A  I   +
Sbjct: 278 SEDVMTPETSNLLHLYSFFSNKPYPELVKNTDLSKLFDLKMNLADSIIDFL 328


>gi|15791051|ref|NP_280875.1| tryptophanyl-tRNA synthetase [Halobacterium sp. NRC-1]
 gi|169236801|ref|YP_001690001.1| tryptophan--tRNA ligase [Halobacterium salinarum R1]
 gi|20178139|sp|Q9HN66|SYW2_HALSA RecName: Full=Tryptophanyl-tRNA synthetase 2; AltName:
          Full=Tryptophan--tRNA ligase 2; Short=TrpRS 2
 gi|10581646|gb|AAG20355.1| tryptophanyl-tRNA synthetase [Halobacterium sp. NRC-1]
 gi|167727867|emb|CAP14655.1| tryptophan--tRNA ligase [Halobacterium salinarum R1]
          Length = 380

 Score = 36.7 bits (84), Expect = 7.2,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 19/54 (35%), Gaps = 4/54 (7%)

Query: 12 LSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
          L  RG  +     R++D   + G  +   G   +   +H GH         LQ 
Sbjct: 45 LVNRGLFY---AGRDVDDFLTAGEQSIVTGVGPSGP-MHLGHAMVFYFARRLQD 94


>gi|116491377|ref|YP_810921.1| SSU ribosomal protein S4P [Oenococcus oeni PSU-1]
 gi|116092102|gb|ABJ57256.1| SSU ribosomal protein S4P [Oenococcus oeni PSU-1]
          Length = 262

 Score = 36.7 bits (84), Expect = 7.2,   Method: Composition-based stats.
 Identities = 7/44 (15%), Positives = 19/44 (43%)

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
           + G A++  +AR+ +    I ++   ++    ++K     S   
Sbjct: 160 RLGLASTRPQARQLVNHGHILVDGKRVTIPSYEVKPGQIISVRE 203


>gi|218884474|ref|YP_002428856.1| 30S ribosomal protein S4e [Desulfurococcus kamchatkensis 1221n]
 gi|254764558|sp|B8D5V8|RS4E_DESK1 RecName: Full=30S ribosomal protein S4e
 gi|218766090|gb|ACL11489.1| 30S ribosomal protein S4e [Desulfurococcus kamchatkensis 1221n]
          Length = 252

 Score = 36.7 bits (84), Expect = 7.2,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 1/53 (1%)

Query: 346 VSRGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
           +SR + LL L+    G+A +  EARR +     KI+  +  + K  + + D  
Sbjct: 39  ISRSLPLLILVRDMLGYAKTGKEARRLIAEGYFKIDGRVRRDYKFPVGVMDVI 91


>gi|161611253|ref|YP_297247.2| glutamyl-tRNA reductase [Ralstonia eutropha JMP134]
 gi|189043063|sp|Q46WT0|HEM1_RALEJ RecName: Full=Glutamyl-tRNA reductase; Short=GluTR
          Length = 434

 Score = 36.7 bits (84), Expect = 7.2,   Method: Composition-based stats.
 Identities = 24/161 (14%), Positives = 56/161 (34%), Gaps = 24/161 (14%)

Query: 10  SILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL----FWLQK 65
             L+E+G   Q    +EL     +  +        TASSL       ++ L      +++
Sbjct: 230 EQLAEQGLTTQAIRLQELGERLHEFDIVVSC----TASSL------PIIGLGAVERAVKR 279

Query: 66  TGHKPISLMG-GGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             H+PI ++       +     R +   +    ++   + +   +  + +       ++ 
Sbjct: 280 RKHRPIMMVDLAVPRDVEPEVARLDDVFLYTVDDLGAVVREGNALRQAAVAQAEAIIESR 339

Query: 125 MLNNETWLCSIKYIDLLREI---------GSFFSVNRMLSF 156
           + N   WL +   + ++RE+                RML+ 
Sbjct: 340 VQNFMHWLETRSVVPVIRELQTAGESIRQAELERARRMLAR 380


>gi|118586622|ref|ZP_01544062.1| 30S ribosomal protein S4 [Oenococcus oeni ATCC BAA-1163]
 gi|118432937|gb|EAV39663.1| 30S ribosomal protein S4 [Oenococcus oeni ATCC BAA-1163]
          Length = 250

 Score = 36.7 bits (84), Expect = 7.2,   Method: Composition-based stats.
 Identities = 7/44 (15%), Positives = 19/44 (43%)

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
           + G A++  +AR+ +    I ++   ++    ++K     S   
Sbjct: 148 RLGLASTRPQARQLVNHGHILVDGKRVTIPSYEVKPGQIISVRE 191


>gi|38234535|ref|NP_940302.1| cysteinyl-tRNA synthetase [Corynebacterium diphtheriae NCTC 13129]
 gi|61216541|sp|Q6NFC3|SYC_CORDI RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|38200798|emb|CAE50502.1| Putative cysteinyl-tRNA synthetase [Corynebacterium diphtheriae]
          Length = 463

 Score = 36.7 bits (84), Expect = 7.2,   Method: Composition-based stats.
 Identities = 30/167 (17%), Positives = 53/167 (31%), Gaps = 29/167 (17%)

Query: 231 TASGTKMGKTLSG--AIWLNKEMTSPYNFWQYWRNIDDADVVSFAK-------------- 274
           T SG KM K+L    ++    +   P     Y  +     ++ +++              
Sbjct: 263 TMSGEKMSKSLGNVLSVPNILDKVRPVELRYYLGSAHYRSMLEYSEGALLEAAAGYRRIE 322

Query: 275 -RLTTLPMSEIDRMAKLQGKEINE---AKKIIATEITTMVHGREEA-----EKAATAAME 325
             LT +   E  +      + +N+     + +A   T + HG         +KA   A  
Sbjct: 323 AFLTKVADVEAGQWTTEFEEAMNDDLAVPRALAEIHTQVRHGNSALAAGDVDKAHEIAAS 382

Query: 326 CFDMSIHSQHMPTIS---ISKDEVSRGMGLLTLIVKAGFATSTNEAR 369
              M+      P       S    S     L ++V+A       EAR
Sbjct: 383 VRAMAAVLGVDPLDEKWLDSAASDSSTNAALDVLVQAELQR-RTEAR 428


>gi|298674790|ref|YP_003726540.1| 30S ribosomal protein S4e [Methanohalobium evestigatum Z-7303]
 gi|298287778|gb|ADI73744.1| Ribosomal protein S4E, central domain protein [Methanohalobium
           evestigatum Z-7303]
          Length = 240

 Score = 36.7 bits (84), Expect = 7.3,   Method: Composition-based stats.
 Identities = 9/52 (17%), Positives = 21/52 (40%), Gaps = 1/52 (1%)

Query: 347 SRGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
            + M +  ++    G   + +EA+R L    + ++     + K  + L D  
Sbjct: 35  EQSMPISVILRDMLGLVDNRSEAKRVLSQGKVLVDGKPRKDLKFPVGLFDII 86


>gi|238928129|ref|ZP_04659889.1| ribosomal protein S4 [Selenomonas flueggei ATCC 43531]
 gi|238884089|gb|EEQ47727.1| ribosomal protein S4 [Selenomonas flueggei ATCC 43531]
          Length = 197

 Score = 36.7 bits (84), Expect = 7.3,   Method: Composition-based stats.
 Identities = 6/44 (13%), Positives = 18/44 (40%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
            ++ + G A +  +AR+ ++     +N   +      ++  D  
Sbjct: 91  NVVFRLGLANTRRQARQLVRHGHFTVNGKRVDIPSALVREGDVI 134


>gi|222824044|ref|YP_002575618.1| leucyl-tRNA synthetase [Campylobacter lari RM2100]
 gi|254782489|sp|B9KCS8|SYL_CAMLR RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|222539266|gb|ACM64367.1| leucyl-tRNA synthetase [Campylobacter lari RM2100]
          Length = 809

 Score = 36.7 bits (84), Expect = 7.3,   Method: Composition-based stats.
 Identities = 13/76 (17%), Positives = 21/76 (27%), Gaps = 11/76 (14%)

Query: 210 IDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADV 269
            DLG          L +  + T  G KM K+    +    +       +        AD 
Sbjct: 553 RDLGYLKDDEPFNRLLTQGMVTKDGAKMSKSKGNVV----DPDYIIEKYG-------ADS 601

Query: 270 VSFAKRLTTLPMSEID 285
                     P  E++
Sbjct: 602 ARLFILFAAPPAKELE 617


>gi|333029357|ref|ZP_08457418.1| ribosomal protein S4 [Bacteroides coprosuis DSM 18011]
 gi|332739954|gb|EGJ70436.1| ribosomal protein S4 [Bacteroides coprosuis DSM 18011]
          Length = 201

 Score = 36.7 bits (84), Expect = 7.3,   Method: Composition-based stats.
 Identities = 9/82 (10%), Positives = 26/82 (31%), Gaps = 3/82 (3%)

Query: 320 ATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKI 379
                  F  +  ++ + T  I    +   +    ++ + G A +   AR+ +    I +
Sbjct: 65  EKQFRNLFTKAEKAKGI-TGEILLQLLESRLD--NVVFRLGIAPTRAAARQLVNHRHITV 121

Query: 380 NNSIISNEKLQIKLQDFDSTGN 401
           +  ++      +K         
Sbjct: 122 DGKVVDIPSFAVKPGQLIGVRE 143


>gi|320104277|ref|YP_004179868.1| pseudouridine synthase [Isosphaera pallida ATCC 43644]
 gi|319751559|gb|ADV63319.1| pseudouridine synthase [Isosphaera pallida ATCC 43644]
          Length = 655

 Score = 36.7 bits (84), Expect = 7.3,   Method: Composition-based stats.
 Identities = 7/57 (12%), Positives = 19/57 (33%), Gaps = 3/57 (5%)

Query: 328 DMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSII 384
              +  + +P+      +  +   L  ++  AG A S       +    + +N   +
Sbjct: 106 GARLIPKILPSYEPEPSD--QPQRLQKILAHAGIA-SRRACEELILQGRVTVNGETV 159


>gi|310657466|ref|YP_003935187.1| 30S ribosomal protein s4 [Clostridium sticklandii DSM 519]
 gi|308824244|emb|CBH20282.1| 30S ribosomal protein S4 [Clostridium sticklandii]
          Length = 192

 Score = 36.7 bits (84), Expect = 7.3,   Method: Composition-based stats.
 Identities = 9/44 (20%), Positives = 22/44 (50%)

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
           + GFA++  +AR+ +    I +N   +     +++++D  S   
Sbjct: 92  RLGFASTLRQARQMVVHGHILVNGKKVDRPSYKVEVEDTISLKE 135


>gi|239932411|ref|ZP_04689364.1| 30S ribosomal protein S4 [Streptomyces ghanaensis ATCC 14672]
 gi|291440777|ref|ZP_06580167.1| 30S ribosomal protein S4 [Streptomyces ghanaensis ATCC 14672]
 gi|291343672|gb|EFE70628.1| 30S ribosomal protein S4 [Streptomyces ghanaensis ATCC 14672]
          Length = 204

 Score = 36.7 bits (84), Expect = 7.3,   Method: Composition-based stats.
 Identities = 9/44 (20%), Positives = 22/44 (50%), Gaps = 1/44 (2%)

Query: 353 LTLIV-KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           L  +V ++G A +  +AR+ +    I++N   +     +++  D
Sbjct: 94  LDALVLRSGIARTIYQARQMVTHGHIQVNGKKVDKPSFRVRPDD 137


>gi|72120140|gb|AAZ62403.1| glutamyl-tRNA reductase [Ralstonia eutropha JMP134]
          Length = 450

 Score = 36.7 bits (84), Expect = 7.3,   Method: Composition-based stats.
 Identities = 24/161 (14%), Positives = 56/161 (34%), Gaps = 24/161 (14%)

Query: 10  SILSERGFIHQISNPRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLL----FWLQK 65
             L+E+G   Q    +EL     +  +        TASSL       ++ L      +++
Sbjct: 246 EQLAEQGLTTQAIRLQELGERLHEFDIVVSC----TASSL------PIIGLGAVERAVKR 295

Query: 66  TGHKPISLMG-GGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDAL 124
             H+PI ++       +     R +   +    ++   + +   +  + +       ++ 
Sbjct: 296 RKHRPIMMVDLAVPRDVEPEVARLDDVFLYTVDDLGAVVREGNALRQAAVAQAEAIIESR 355

Query: 125 MLNNETWLCSIKYIDLLREI---------GSFFSVNRMLSF 156
           + N   WL +   + ++RE+                RML+ 
Sbjct: 356 VQNFMHWLETRSVVPVIRELQTAGESIRQAELERARRMLAR 396


>gi|300870412|ref|YP_003785283.1| RNA pseudouridine synthase family protein [Brachyspira pilosicoli
           95/1000]
 gi|300688111|gb|ADK30782.1| RNA pseudouridine synthase family protein [Brachyspira pilosicoli
           95/1000]
          Length = 225

 Score = 36.7 bits (84), Expect = 7.4,   Method: Composition-based stats.
 Identities = 11/34 (32%), Positives = 15/34 (44%)

Query: 362 ATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
             S  EA   +K   +K+N  II N   Q+   D
Sbjct: 12  IASRREADNLIKDGKVKVNGEIILNPATQVSETD 45


>gi|290890943|ref|ZP_06554007.1| hypothetical protein AWRIB429_1397 [Oenococcus oeni AWRIB429]
 gi|290479342|gb|EFD88002.1| hypothetical protein AWRIB429_1397 [Oenococcus oeni AWRIB429]
          Length = 250

 Score = 36.7 bits (84), Expect = 7.4,   Method: Composition-based stats.
 Identities = 7/44 (15%), Positives = 19/44 (43%)

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
           + G A++  +AR+ +    I ++   ++    ++K     S   
Sbjct: 148 RLGLASTRPQARQLVNHGHILVDGKRVTIPSYEVKPGQIISVRE 191


>gi|289548515|ref|YP_003473503.1| ribosomal protein S4 [Thermocrinis albus DSM 14484]
 gi|289182132|gb|ADC89376.1| ribosomal protein S4 [Thermocrinis albus DSM 14484]
          Length = 209

 Score = 36.7 bits (84), Expect = 7.4,   Method: Composition-based stats.
 Identities = 13/67 (19%), Positives = 26/67 (38%), Gaps = 8/67 (11%)

Query: 342 SKDEVSRGMGLLTLI--------VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL 393
           SK + + G  LL L+         + G A +  +AR+ +    I +N   ++     ++ 
Sbjct: 82  SKSKGNTGQVLLQLLERRLDNVVYRLGIACTRRQARQFVAHGHILVNGKKVNIPSYLVEP 141

Query: 394 QDFDSTG 400
            D     
Sbjct: 142 GDVIEVK 148


>gi|253682435|ref|ZP_04863232.1| leucine--tRNA ligase [Clostridium botulinum D str. 1873]
 gi|253562147|gb|EES91599.1| leucine--tRNA ligase [Clostridium botulinum D str. 1873]
          Length = 812

 Score = 36.7 bits (84), Expect = 7.4,   Method: Composition-based stats.
 Identities = 9/55 (16%), Positives = 18/55 (32%), Gaps = 11/55 (20%)

Query: 228 LLTTASGTKMGKTLSGAIWLNK-------EMTSPYNFWQYWRN----IDDADVVS 271
           L+    G KM K+    I  +        ++   Y  + +  +      D  + S
Sbjct: 564 LILGPDGLKMSKSKGNTIAPDDYIKEYGADVFRMYLMFGFAYSEGGAWSDDAIKS 618


>gi|149197866|ref|ZP_01874915.1| 30S ribosomal protein S4 [Lentisphaera araneosa HTCC2155]
 gi|149139087|gb|EDM27491.1| 30S ribosomal protein S4 [Lentisphaera araneosa HTCC2155]
          Length = 205

 Score = 36.7 bits (84), Expect = 7.4,   Method: Composition-based stats.
 Identities = 12/76 (15%), Positives = 28/76 (36%), Gaps = 3/76 (3%)

Query: 320 ATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKI 379
                  FD +     +   ++     +R   ++    + GFA + + AR+ +    I+I
Sbjct: 69  EKQFRITFDRAAKLSGVTGNNLMVLLEARLDNVVY---RLGFAPTRSAARQLVGHGHIRI 125

Query: 380 NNSIISNEKLQIKLQD 395
           N    +     ++  D
Sbjct: 126 NGRRCNIPSYSVRPGD 141


>gi|149182614|ref|ZP_01861084.1| 16S pseudouridylate synthase [Bacillus sp. SG-1]
 gi|148849692|gb|EDL63872.1| 16S pseudouridylate synthase [Bacillus sp. SG-1]
          Length = 239

 Score = 36.7 bits (84), Expect = 7.4,   Method: Composition-based stats.
 Identities = 11/45 (24%), Positives = 22/45 (48%), Gaps = 1/45 (2%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
           M +  L+   G+  S  E ++HLK     +N  ++ + K Q+  +
Sbjct: 1   MRIDKLLSNMGY-GSRKEVKKHLKGGGTVVNGEVVKDPKFQVDPE 44


>gi|75907235|ref|YP_321531.1| RNA-binding S4 [Anabaena variabilis ATCC 29413]
 gi|75700960|gb|ABA20636.1| RNA-binding S4 [Anabaena variabilis ATCC 29413]
          Length = 259

 Score = 36.7 bits (84), Expect = 7.4,   Method: Composition-based stats.
 Identities = 17/71 (23%), Positives = 28/71 (39%), Gaps = 6/71 (8%)

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDST-GNIKLSFG---- 407
           L  I  AGF  S ++    + S  +++N   ++    Q+K  D  +  G  +L  G    
Sbjct: 186 LDAIASAGFGMSRSKMVDLIDSGDVRVNWKEVTQASSQVKSGDLIAIRGKGRLEVGEIAV 245

Query: 408 -KKNHIICHLC 417
            KK      L 
Sbjct: 246 TKKERYRVQLT 256


>gi|15893914|ref|NP_347263.1| tryptophanyl-tRNA synthetase [Clostridium acetobutylicum ATCC 824]
 gi|15023498|gb|AAK78603.1|AE007578_1 Tryptophan-tRNA synthetase, trpS [Clostridium acetobutylicum ATCC
           824]
          Length = 343

 Score = 36.7 bits (84), Expect = 7.4,   Method: Composition-based stats.
 Identities = 44/263 (16%), Positives = 81/263 (30%), Gaps = 46/263 (17%)

Query: 30  LCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG-HKPISLMGGGTSIIGDPSFRD 88
           +  +     + G   +   L  G+    +   W++    +     +    +I      +D
Sbjct: 8   IMGENKKVIFSGIQPSGE-LTIGNYFGAIK-NWVKLQDEYDCYYCIVDLHAITVKQEAKD 65

Query: 89  ESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFF 148
             RR +  Q I   I        +   +      A +     W+  +  +  + E+    
Sbjct: 66  LRRRTL--QLIATYIASGIDPEKN-TIFIQSHVPAHVQ--AQWI--LNCMSYVGEL---- 114

Query: 149 SVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIIC 208
             +RM  F+    + + +  +     NY +L A D +     Y   L   G DQ  +I  
Sbjct: 115 --SRMTQFKDKSKKYE-DTGIGAGLLNYPVLMAADILI----YQADLVPVGKDQTQHIEL 167

Query: 209 GIDLGERL-----------------KTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEM 251
             DL +R                     K+ +L  PL       KM K+          M
Sbjct: 168 TRDLAQRFNSTYSETFKIPEGYIPTGGAKIMSLQEPL------KKMSKSSDNPNSFILIM 221

Query: 252 TSPYNFWQYW-RNIDDAD-VVSF 272
             P    +   R + D   VV +
Sbjct: 222 DPPEVIKRKIARAVTDNVGVVKY 244


>gi|323699009|ref|ZP_08110921.1| tryptophanyl-tRNA synthetase [Desulfovibrio sp. ND132]
 gi|323458941|gb|EGB14806.1| tryptophanyl-tRNA synthetase [Desulfovibrio desulfuricans ND132]
          Length = 307

 Score = 36.7 bits (84), Expect = 7.5,   Method: Composition-based stats.
 Identities = 18/108 (16%), Positives = 38/108 (35%), Gaps = 9/108 (8%)

Query: 199 GSDQWGNIICGIDLGERLKT--PKLFAL------TSPLLTTASGT-KMGKTLSGAIWLNK 249
           G DQ  +I    ++  R  T   ++F +        P L    G  KM K+L   I L  
Sbjct: 151 GEDQIPHIEQTREIAHRFNTLFGEVFPIPEYRVSAFPRLPGLDGKNKMSKSLGNVINLTD 210

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINE 297
           +  +  +  +   + +   + ++ +     P   +        + +N 
Sbjct: 211 DEPTVNDKIKKAYSGEGHALFTYGRLFGVEPNERMGVFKPALAEAVNA 258


>gi|253795707|ref|YP_003038803.1| 30S ribosomal subunit protein S4 [Candidatus Hodgkinia cicadicola
           Dsem]
 gi|253740015|gb|ACT34350.1| 30S ribosomal subunit protein S4 [Candidatus Hodgkinia cicadicola
           Dsem]
          Length = 207

 Score = 36.7 bits (84), Expect = 7.5,   Method: Composition-based stats.
 Identities = 10/34 (29%), Positives = 18/34 (52%), Gaps = 1/34 (2%)

Query: 353 LTLIV-KAGFATSTNEARRHLKSNAIKINNSIIS 385
           L ++V +A  A S   AR+ +    + +NNS + 
Sbjct: 96  LDVLVYRARLAASFRAARQLISHGHVLVNNSKVD 129


>gi|218235571|ref|YP_002365965.1| tryptophanyl-tRNA synthetase [Bacillus cereus B4264]
 gi|228920002|ref|ZP_04083353.1| Tryptophanyl-tRNA synthetase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228957554|ref|ZP_04119306.1| Tryptophanyl-tRNA synthetase [Bacillus thuringiensis serovar
           pakistani str. T13001]
 gi|229043028|ref|ZP_04190758.1| Tryptophanyl-tRNA synthetase [Bacillus cereus AH676]
 gi|229108742|ref|ZP_04238350.1| Tryptophanyl-tRNA synthetase [Bacillus cereus Rock1-15]
 gi|229126590|ref|ZP_04255604.1| Tryptophanyl-tRNA synthetase [Bacillus cereus BDRD-Cer4]
 gi|229149485|ref|ZP_04277720.1| Tryptophanyl-tRNA synthetase [Bacillus cereus m1550]
 gi|296501874|ref|YP_003663574.1| tryptophanyl-tRNA synthetase [Bacillus thuringiensis BMB171]
 gi|218163528|gb|ACK63520.1| tryptophan--tRNA ligase [Bacillus cereus B4264]
 gi|228633958|gb|EEK90552.1| Tryptophanyl-tRNA synthetase [Bacillus cereus m1550]
 gi|228656979|gb|EEL12803.1| Tryptophanyl-tRNA synthetase [Bacillus cereus BDRD-Cer4]
 gi|228674681|gb|EEL29917.1| Tryptophanyl-tRNA synthetase [Bacillus cereus Rock1-15]
 gi|228726269|gb|EEL77496.1| Tryptophanyl-tRNA synthetase [Bacillus cereus AH676]
 gi|228802146|gb|EEM49011.1| Tryptophanyl-tRNA synthetase [Bacillus thuringiensis serovar
           pakistani str. T13001]
 gi|228839627|gb|EEM84917.1| Tryptophanyl-tRNA synthetase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|296322926|gb|ADH05854.1| tryptophanyl-tRNA synthetase [Bacillus thuringiensis BMB171]
          Length = 329

 Score = 36.7 bits (84), Expect = 7.5,   Method: Composition-based stats.
 Identities = 31/164 (18%), Positives = 54/164 (32%), Gaps = 33/164 (20%)

Query: 174 FNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTAS 233
             Y  L A D +     Y+  +   G DQ  +I    DL ER         T P +    
Sbjct: 123 LTYPPLMAADILL----YNTEIVPVGDDQKQHIELTRDLAERFNKRYREIFTMPEIRIPK 178

Query: 234 -G----------TKMGKTLSGAIWLNKEMTSPYNFWQYWRN-IDDAD-VVSFAKR----- 275
            G           KM K+      +   +  P    +  ++ + D++ +V F K      
Sbjct: 179 VGARVMSLTEPTKKMSKSDPNPKSMISMLDEPKTIEKKIKSAVTDSEGIVKFDKENKPGI 238

Query: 276 ---------LTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMV 310
                     +   + EI+ M   +GK   + K  +A  +   +
Sbjct: 239 SNLLTIYSSFSGKTVEEIEAMY--EGKGYGDFKGDLAQVVVEAI 280


>gi|163939080|ref|YP_001643964.1| tryptophanyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
 gi|163861277|gb|ABY42336.1| tryptophanyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
          Length = 329

 Score = 36.7 bits (84), Expect = 7.5,   Method: Composition-based stats.
 Identities = 29/170 (17%), Positives = 56/170 (32%), Gaps = 45/170 (26%)

Query: 174 FNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK---------------- 217
             Y  L A D +     Y+  +   G DQ  ++    DL ER                  
Sbjct: 123 LTYPPLMAADILL----YNTEIVPVGDDQKQHMELTRDLAERFNKRFREVFTVPEIRIPK 178

Query: 218 -TPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRN-IDDAD-VVSFAK 274
              ++ +LT P        KM K+      +   +  P    +  ++ + D++ +V F K
Sbjct: 179 VGARVMSLTEPT------KKMSKSDPNPKAMISMLDEPKTIEKKIKSAVTDSEGIVKFDK 232

Query: 275 R--------------LTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMV 310
                           +   + EI+ M + +G    + K  +A  +   +
Sbjct: 233 ENKPGISNLLTIYSSFSGKTVEEIEAMYEEKG--YGDFKGDLAQVVVEAI 280


>gi|91975480|ref|YP_568139.1| lysyl-tRNA synthetase [Rhodopseudomonas palustris BisB5]
 gi|91681936|gb|ABE38238.1| lysyl-tRNA synthetase [Rhodopseudomonas palustris BisB5]
          Length = 545

 Score = 36.7 bits (84), Expect = 7.5,   Method: Composition-based stats.
 Identities = 22/135 (16%), Positives = 43/135 (31%), Gaps = 10/135 (7%)

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            D+           +M G D   ++     + + +           L     G K+ K+ 
Sbjct: 245 PDWAMRWTALGVDYEMAGKDLIDSVKLSGKIAQAIGGLPPEGFNYELFLDDKGQKISKSK 304

Query: 242 SGAIWLNK--EMTSPYNFWQYWRNIDDADVVSFAKRLTT--LPMSEIDRMAKLQGKEINE 297
              + +++     SP +   +            AKRL    +P +  D    L G    +
Sbjct: 305 GNGLTIDEWLRYASPESLALFMYREP-----KAAKRLYFDVIPRNVDDYQQFLDGFARQD 359

Query: 298 AKKIIATEITTMVHG 312
           AK+ +A      +H 
Sbjct: 360 AKQQLA-NPVWHIHS 373


>gi|303244310|ref|ZP_07330647.1| ribosomal protein S4 [Methanothermococcus okinawensis IH1]
 gi|302485437|gb|EFL48364.1| ribosomal protein S4 [Methanothermococcus okinawensis IH1]
          Length = 177

 Score = 36.7 bits (84), Expect = 7.5,   Method: Composition-based stats.
 Identities = 15/91 (16%), Positives = 35/91 (38%), Gaps = 7/91 (7%)

Query: 314 EEAEKAATAAMECFD-----MSIHSQHMPTISISKDEVSRGMG--LLTLIVKAGFATSTN 366
           +  E+ A  A++ F        +  +      +    V   +   L TL+ + G A +  
Sbjct: 61  DTTEQGAKEAVQLFGILKRYGILIKEDASLDDVLSLNVESILNRRLQTLVFRKGLAKTPK 120

Query: 367 EARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
           +AR+ +    I +N   +++    +   + D
Sbjct: 121 QARQFIVHGHIAVNGRRVTSPSYLVPSDEED 151


>gi|188996212|ref|YP_001930463.1| ribosomal protein S4 [Sulfurihydrogenibium sp. YO3AOP1]
 gi|226695086|sp|B2V7I6|RS4_SULSY RecName: Full=30S ribosomal protein S4
 gi|188931279|gb|ACD65909.1| ribosomal protein S4 [Sulfurihydrogenibium sp. YO3AOP1]
          Length = 204

 Score = 36.7 bits (84), Expect = 7.5,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 25/68 (36%), Gaps = 8/68 (11%)

Query: 342 SKDEVSRGMGLLTLI--------VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL 393
           SK   + G  LL L+         + GFA +  +AR+ +K     +N   +     ++  
Sbjct: 78  SKAAGNTGTVLLQLLERRLDNVVYRLGFAKTRLQARQLVKHGHFLVNGKKVDIPSYELDK 137

Query: 394 QDFDSTGN 401
            D      
Sbjct: 138 GDIIEVRE 145


>gi|124028167|ref|YP_001013487.1| 30S ribosomal protein S4e [Hyperthermus butylicus DSM 5456]
 gi|189045349|sp|A2BMD1|RS4E_HYPBU RecName: Full=30S ribosomal protein S4e
 gi|123978861|gb|ABM81142.1| 30S ribosomal protein S4e [Hyperthermus butylicus DSM 5456]
          Length = 255

 Score = 36.7 bits (84), Expect = 7.5,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 24/53 (45%), Gaps = 1/53 (1%)

Query: 346 VSRGMGLLTLIVK-AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
           + R + LL L+    G+A +  EAR+ +     KI+  +  N K  +   D  
Sbjct: 39  IERSIPLLILVRDVLGYAKTAREARKLIAEGHFKIDGRVRRNYKYPVGFMDVI 91


>gi|83772313|dbj|BAE62443.1| unnamed protein product [Aspergillus oryzae]
          Length = 439

 Score = 36.7 bits (84), Expect = 7.5,   Method: Composition-based stats.
 Identities = 11/53 (20%), Positives = 18/53 (33%), Gaps = 5/53 (9%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQL-----MLLFWLQKTGHKPISLM 74
           LD          Y G   ++ S+H GH         M    + +T    + L+
Sbjct: 97  LDRYEKGQPFYLYTGRGPSSDSMHVGHTIPFEFTKYMAARCMFRTFLPVVPLV 149


>gi|332881080|ref|ZP_08448748.1| ribosomal protein S4 [Capnocytophaga sp. oral taxon 329 str. F0087]
 gi|332680992|gb|EGJ53921.1| ribosomal protein S4 [Capnocytophaga sp. oral taxon 329 str. F0087]
          Length = 201

 Score = 36.7 bits (84), Expect = 7.6,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 17/42 (40%)

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
           G A + + AR+ +    I +N  I++     +K  D      
Sbjct: 103 GIAPTRSAARQLVSHRHITLNGEIVNIPSYLLKPGDVVGVRE 144


>gi|289064347|gb|ADC80549.1| tryptophan aminoacyl-tRNA synthetase [Toxoplasma gondii]
          Length = 689

 Score = 36.7 bits (84), Expect = 7.6,   Method: Composition-based stats.
 Identities = 11/36 (30%), Positives = 17/36 (47%)

Query: 38  AYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
            Y G   ++ +LH GHL   M   +LQ     P+ +
Sbjct: 376 LYTGRGPSSEALHIGHLVPFMFTKYLQDVFDVPLVI 411


>gi|254779796|ref|YP_003057902.1| tryptophanyl-tRNA synthetase [Helicobacter pylori B38]
 gi|254001708|emb|CAX29939.1| Tryptophanyl-tRNA synthetase (Tryptophan--tRNA ligase) (TrpRS)
           [Helicobacter pylori B38]
          Length = 326

 Score = 36.7 bits (84), Expect = 7.6,   Method: Composition-based stats.
 Identities = 36/188 (19%), Positives = 62/188 (32%), Gaps = 39/188 (20%)

Query: 147 FFSVNRMLSFESVR-SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGN 205
             S+  M      +   LK  +S++   FNY IL A D +     Y   L   G DQ  +
Sbjct: 98  QVSMGEMQRMTQFKDKSLKNPKSVNVGLFNYPILMASDILL----YQSDLVPVGEDQKQH 153

Query: 206 IICGIDLGERLKT--PKLFALTSPLLTTASG---------TKMGKTLSG---AIWLNKEM 251
           +    ++ E+        F +  PL+               KM K+  G   AI+L   +
Sbjct: 154 LELTRNVAEKFNRDFGNCFKVPEPLIAKVGARVMGLDDPKVKMSKSHQGANHAIFL---L 210

Query: 252 TSPYNFWQYWRNIDDADV---------------VSFAKRLTTLPMSEIDRMAKLQGKEIN 296
             P    +  +      +               ++    L+      I+   K +G    
Sbjct: 211 DEPDIIVRKIKKAATDSMGVIAFDEKREGVFNLLNIYMLLSNESPENIEERFKNKG--YG 268

Query: 297 EAKKIIAT 304
           + KK +A 
Sbjct: 269 DFKKELAE 276


>gi|229132077|ref|ZP_04260939.1| Tryptophanyl-tRNA synthetase [Bacillus cereus BDRD-ST196]
 gi|228651376|gb|EEL07349.1| Tryptophanyl-tRNA synthetase [Bacillus cereus BDRD-ST196]
          Length = 329

 Score = 36.7 bits (84), Expect = 7.6,   Method: Composition-based stats.
 Identities = 30/170 (17%), Positives = 56/170 (32%), Gaps = 45/170 (26%)

Query: 174 FNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK---------------- 217
             Y  L A D +     Y+  +   G DQ  ++    DL ER                  
Sbjct: 123 LTYPPLMAADILL----YNTEIVPVGDDQKQHMELTRDLAERFNKRFREVFTVPEIRIPK 178

Query: 218 -TPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRN-IDDAD-VVSFAK 274
              ++ +LT P        KM K+      +   +  P    +  ++ + D++ +V F K
Sbjct: 179 VGARVMSLTEPT------KKMSKSDPNPKAMISMLDEPKTIEKKIKSAVTDSEGIVKFDK 232

Query: 275 R--------------LTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMV 310
                           +   + EI+ M   +GK   + K  +A  +   +
Sbjct: 233 ENKPGISNLLTIYSSFSGKTVEEIEVMY--EGKGYGDFKGDLAQVVVEAI 280


>gi|229171925|ref|ZP_04299492.1| Tryptophanyl-tRNA synthetase [Bacillus cereus MM3]
 gi|228611559|gb|EEK68814.1| Tryptophanyl-tRNA synthetase [Bacillus cereus MM3]
          Length = 329

 Score = 36.7 bits (84), Expect = 7.6,   Method: Composition-based stats.
 Identities = 30/170 (17%), Positives = 56/170 (32%), Gaps = 45/170 (26%)

Query: 174 FNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK---------------- 217
             Y  L A D +     Y+  +   G DQ  ++    DL ER                  
Sbjct: 123 LTYPPLMAADILL----YNTEIVPVGDDQKQHMELTRDLAERFNKRFREVFTVPEIRIPK 178

Query: 218 -TPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRN-IDDAD-VVSFAK 274
              ++ +LT P        KM K+      +   +  P    +  ++ + D++ +V F K
Sbjct: 179 VGARVMSLTEPT------KKMSKSDPNPKAMISMLDEPKTIEKKIKSAVTDSEGIVKFDK 232

Query: 275 R--------------LTTLPMSEIDRMAKLQGKEINEAKKIIATEITTMV 310
                           +   + EI+ M   +GK   + K  +A  +   +
Sbjct: 233 ENKPGISNLLTIYSSFSGKTVEEIEAMY--EGKGYGDFKGDLAAVVVEAI 280


>gi|213419438|ref|ZP_03352504.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. E01-6750]
          Length = 189

 Score = 36.7 bits (84), Expect = 7.6,   Method: Composition-based stats.
 Identities = 7/44 (15%), Positives = 13/44 (29%), Gaps = 4/44 (9%)

Query: 206 IICGIDLGERLKTPKLF----ALTSPLLTTASGTKMGKTLSGAI 245
           I+  +   +               + L+    G KM K+    I
Sbjct: 140 IMMTMHFIKDENGKPQVPFHTVYMTGLIRDDEGQKMSKSKGNVI 183


>gi|167771240|ref|ZP_02443293.1| hypothetical protein ANACOL_02598 [Anaerotruncus colihominis DSM
           17241]
 gi|167666491|gb|EDS10621.1| hypothetical protein ANACOL_02598 [Anaerotruncus colihominis DSM
           17241]
          Length = 206

 Score = 36.7 bits (84), Expect = 7.6,   Method: Composition-based stats.
 Identities = 10/45 (22%), Positives = 21/45 (46%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
            ++ + GFA S  EAR+ ++     +N    +   + +K  D  +
Sbjct: 103 NVVYRLGFAASRKEARQLVRHGHFTVNGKKANIPSILLKAGDVVA 147


>gi|312793399|ref|YP_004026322.1| pseudouridine synthase [Caldicellulosiruptor kristjanssonii 177R1B]
 gi|312877026|ref|ZP_07736999.1| pseudouridine synthase [Caldicellulosiruptor lactoaceticus 6A]
 gi|311796167|gb|EFR12523.1| pseudouridine synthase [Caldicellulosiruptor lactoaceticus 6A]
 gi|312180539|gb|ADQ40709.1| pseudouridine synthase [Caldicellulosiruptor kristjanssonii 177R1B]
          Length = 232

 Score = 36.7 bits (84), Expect = 7.7,   Method: Composition-based stats.
 Identities = 8/46 (17%), Positives = 20/46 (43%), Gaps = 1/46 (2%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           M L   +   GF  S ++ ++ ++   + +N   I     +I  ++
Sbjct: 1   MRLDKFLTHCGF-GSRSQVKKLIREGIVTVNGKRIVEVDFKINPEE 45


>gi|300779797|ref|ZP_07089653.1| 30S ribosomal protein S4 [Corynebacterium genitalium ATCC 33030]
 gi|300533907|gb|EFK54966.1| 30S ribosomal protein S4 [Corynebacterium genitalium ATCC 33030]
          Length = 201

 Score = 36.7 bits (84), Expect = 7.7,   Method: Composition-based stats.
 Identities = 8/48 (16%), Positives = 18/48 (37%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
            ++ +AG A +  +AR+ +      +N    +    Q+   D      
Sbjct: 95  NVVYRAGLARTRRQARQLVSHGHFTVNGVKTNVPSYQVTQYDIIDVRE 142


>gi|268678707|ref|YP_003303138.1| RNA-binding S4 domain protein [Sulfurospirillum deleyianum DSM
           6946]
 gi|268616738|gb|ACZ11103.1| RNA-binding S4 domain protein [Sulfurospirillum deleyianum DSM
           6946]
          Length = 261

 Score = 36.7 bits (84), Expect = 7.7,   Method: Composition-based stats.
 Identities = 6/32 (18%), Positives = 18/32 (56%)

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           S  EA   +K+  +K++ +++ +   Q+  ++
Sbjct: 17  SRREADELIKAGHVKVDGNVVQDLSTQVSFKN 48


>gi|221484460|gb|EEE22756.1| tryptophanyl-tRNA synthetase, putative [Toxoplasma gondii GT1]
 gi|221505571|gb|EEE31216.1| tryptophanyl-tRNA synthetase, putative [Toxoplasma gondii VEG]
          Length = 689

 Score = 36.7 bits (84), Expect = 7.7,   Method: Composition-based stats.
 Identities = 11/36 (30%), Positives = 17/36 (47%)

Query: 38  AYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
            Y G   ++ +LH GHL   M   +LQ     P+ +
Sbjct: 376 LYTGRGPSSEALHIGHLVPFMFTKYLQDVFDVPLVI 411


>gi|157372205|ref|YP_001480194.1| 23S rRNA pseudouridine synthase F [Serratia proteamaculans 568]
 gi|157323969|gb|ABV43066.1| pseudouridine synthase [Serratia proteamaculans 568]
          Length = 286

 Score = 36.7 bits (84), Expect = 7.7,   Method: Composition-based stats.
 Identities = 8/48 (16%), Positives = 18/48 (37%), Gaps = 1/48 (2%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
           I ++G   S  +A R+++   + IN   ++              G + 
Sbjct: 13  ISESGIC-SRRDADRYIEQGNVFINGKRVTLGDQVFPGDVVKVNGQLI 59


>gi|11496535|ref|NP_044545.1| ribosomal protein S4 [Toxoplasma gondii RH]
 gi|74828576|sp|Q9XQQ7|RR4_TOXGO RecName: Full=Apicoplast 30S ribosomal protein S4
 gi|5231238|gb|AAD41132.1|U87145_1 ribosomal protein S4 [Toxoplasma gondii]
          Length = 198

 Score = 36.7 bits (84), Expect = 7.7,   Method: Composition-based stats.
 Identities = 14/60 (23%), Positives = 24/60 (40%), Gaps = 7/60 (11%)

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIICHLC 417
           + GFA S N+AR+ +    I IN+ ++      +  +D             K   I  +C
Sbjct: 93  RLGFAKSINQARQLITHGFIFINSILVKKPSFILTEKDLIYINP-------KKFTIILIC 145


>gi|78048533|ref|YP_364708.1| hypothetical protein XCV2977 [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
 gi|325928508|ref|ZP_08189698.1| hypothetical protein XPE_3759 [Xanthomonas perforans 91-118]
 gi|78036963|emb|CAJ24665.1| conserved hypothetical protein [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
 gi|325541121|gb|EGD12673.1| hypothetical protein XPE_3759 [Xanthomonas perforans 91-118]
          Length = 80

 Score = 36.7 bits (84), Expect = 7.7,   Method: Composition-based stats.
 Identities = 10/66 (15%), Positives = 26/66 (39%)

Query: 341 ISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG 400
           +  D     + L  L+  AG A S  + +  + S A+ ++      +  +I+        
Sbjct: 4   LEFDLDGDYIELNQLLKLAGIADSGGQGKAIVASGAVSVDGVQELRKTAKIRPGQLVQLD 63

Query: 401 NIKLSF 406
           ++++  
Sbjct: 64  DVEIRV 69


>gi|312889341|ref|ZP_07748895.1| SSU ribosomal protein S4P [Mucilaginibacter paludis DSM 18603]
 gi|311298218|gb|EFQ75333.1| SSU ribosomal protein S4P [Mucilaginibacter paludis DSM 18603]
          Length = 202

 Score = 36.7 bits (84), Expect = 7.7,   Method: Composition-based stats.
 Identities = 11/82 (13%), Positives = 29/82 (35%), Gaps = 3/82 (3%)

Query: 320 ATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKI 379
                  F  +   + +   ++ K   +R    +    + G A + + AR+ +    I +
Sbjct: 66  EKQFENLFHRASSKEGITGENLLKFLEARLDNAVY---RLGIAPTRSGARQLVGHKHITV 122

Query: 380 NNSIISNEKLQIKLQDFDSTGN 401
           N  +++     +K  D  +   
Sbjct: 123 NGEVVNIASYALKAGDVIAVRE 144


>gi|309813142|ref|ZP_07706866.1| cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Dermacoccus sp. Ellin185]
 gi|308432946|gb|EFP56854.1| cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Dermacoccus sp. Ellin185]
          Length = 420

 Score = 36.7 bits (84), Expect = 7.7,   Method: Composition-based stats.
 Identities = 10/57 (17%), Positives = 17/57 (29%), Gaps = 3/57 (5%)

Query: 192 DCRLQMGGSDQWG--NIICGIDLGERLKTPK-LFALTSPLLTTASGTKMGKTLSGAI 245
              LQ GG+D     + +  +        P          +    G KM K+    +
Sbjct: 254 GFTLQGGGTDLIFPHHEMSAVQANALTGQPPFAHHYAHQGMVGYDGEKMSKSKGNLV 310


>gi|297583620|ref|YP_003699400.1| 30S ribosomal protein S4 [Bacillus selenitireducens MLS10]
 gi|297142077|gb|ADH98834.1| ribosomal protein S4 [Bacillus selenitireducens MLS10]
          Length = 200

 Score = 36.7 bits (84), Expect = 7.7,   Method: Composition-based stats.
 Identities = 6/48 (12%), Positives = 18/48 (37%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
            L+ + G A +  +AR+ +    + ++   +     ++      S   
Sbjct: 96  NLVYRLGLARTRRQARQLVNHGHVTVDGKRVDIPSYRVAPGQSISLRE 143


>gi|68067989|ref|XP_675913.1| tryptophan--tRNA ligase [Plasmodium berghei strain ANKA]
 gi|56495362|emb|CAH99468.1| tryptophan--tRNA ligase, putative [Plasmodium berghei]
          Length = 376

 Score = 36.7 bits (84), Expect = 7.7,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 23/53 (43%), Gaps = 4/53 (7%)

Query: 25  RELDILCS----QGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           R+LD L +          Y G   ++ S+H GHL       +LQ   + P+ +
Sbjct: 301 RDLDFLLNYYEKNKSFYIYTGRGPSSLSMHLGHLIPFYFCKYLQDVFNVPLII 353


>gi|71402184|ref|XP_804035.1| tryptophanyl-tRNA synthetase [Trypanosoma cruzi strain CL Brener]
 gi|70866783|gb|EAN82184.1| tryptophanyl-tRNA synthetase, putative [Trypanosoma cruzi]
          Length = 164

 Score = 36.7 bits (84), Expect = 7.7,   Method: Composition-based stats.
 Identities = 15/65 (23%), Positives = 26/65 (40%), Gaps = 6/65 (9%)

Query: 15  RGFIHQI----SNPRELDILCSQGVVTAYI--GYDLTASSLHAGHLTQLMLLFWLQKTGH 68
           RG +       +    +    + G   AY+  G   +A S+H GH    +L  +LQ    
Sbjct: 53  RGIVFSHRDFGTALDCVRASLATGTHRAYLYTGRGPSAQSMHIGHCIPFLLTRYLQDALG 112

Query: 69  KPISL 73
            P+ +
Sbjct: 113 LPLVI 117


>gi|70988895|ref|XP_749299.1| tryptophanyl-tRNA synthetase [Aspergillus fumigatus Af293]
 gi|66846930|gb|EAL87261.1| tryptophanyl-tRNA synthetase [Aspergillus fumigatus Af293]
 gi|159128713|gb|EDP53827.1| tryptophanyl-tRNA synthetase [Aspergillus fumigatus A1163]
          Length = 416

 Score = 36.7 bits (84), Expect = 7.7,   Method: Composition-based stats.
 Identities = 12/56 (21%), Positives = 17/56 (30%), Gaps = 5/56 (8%)

Query: 15  RGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQL----MLLFWLQK 65
           RG +    +    LD          Y G   ++ S+H GH              QK
Sbjct: 84  RGIVFSHRDLNLILDRYEKGQPFYLYTGRGPSSDSMHVGHTIPFEFTKCKYMHSQK 139


>gi|325289798|ref|YP_004265979.1| ribosomal large subunit pseudouridine synthase B [Syntrophobotulus
           glycolicus DSM 8271]
 gi|324965199|gb|ADY55978.1| ribosomal large subunit pseudouridine synthase B [Syntrophobotulus
           glycolicus DSM 8271]
          Length = 270

 Score = 36.7 bits (84), Expect = 7.8,   Method: Composition-based stats.
 Identities = 13/67 (19%), Positives = 26/67 (38%), Gaps = 5/67 (7%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLS---- 405
           M L   I  +G A S   A   +    +K+N  +++   +++   D        +     
Sbjct: 25  MRLQKAIALSGLA-SRRRAEEMMTEGRVKVNGVVVTELGMKVCGTDTIEVDGKTVQSLEV 83

Query: 406 FGKKNHI 412
            GK+N +
Sbjct: 84  KGKENKV 90


>gi|221640024|ref|YP_002526286.1| lysyl-tRNA synthetase [Rhodobacter sphaeroides KD131]
 gi|221160805|gb|ACM01785.1| Lysyl-tRNA synthetase [Rhodobacter sphaeroides KD131]
          Length = 526

 Score = 36.7 bits (84), Expect = 7.8,   Method: Composition-based stats.
 Identities = 18/84 (21%), Positives = 28/84 (33%), Gaps = 4/84 (4%)

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            DF       D   +M G D   N      + E L   K    T  L     G K+ K+ 
Sbjct: 236 PDFGARWAALDVDFEMYGKDHSTNTPIYDGICEVLGGRKPEHFTYELFLDDKGEKISKSK 295

Query: 242 SGAI----WLNKEMTSPYNFWQYW 261
              +    WL+   T   +++ + 
Sbjct: 296 GNGLTIDEWLSYASTESLSYFMFL 319


>gi|115388607|ref|XP_001211809.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
 gi|114195893|gb|EAU37593.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
          Length = 457

 Score = 36.7 bits (84), Expect = 7.8,   Method: Composition-based stats.
 Identities = 15/85 (17%), Positives = 31/85 (36%), Gaps = 3/85 (3%)

Query: 312 GREEAEKAATAAMECFDMSIHSQHM-PTISISKDEVSRGMGLLTLIVKAGFATSTNEARR 370
           G      A        D    +  + P   ++   + R + +   I +A FA+S  +AR+
Sbjct: 89  GMAAGRGAGLDDAANADQGRSAGRLTPFTQMTFAPLERRLDVA--IFRAMFASSARQARQ 146

Query: 371 HLKSNAIKINNSIISNEKLQIKLQD 395
            +   A+ +N   +      +   D
Sbjct: 147 FVVHGAVTVNGKKMRYPGYLLNPGD 171


>gi|78357275|ref|YP_388724.1| 30S ribosomal protein S4 [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|90101689|sp|Q30Z67|RS4_DESDG RecName: Full=30S ribosomal protein S4
 gi|78219680|gb|ABB39029.1| SSU ribosomal protein S4P [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 208

 Score = 36.7 bits (84), Expect = 7.8,   Method: Composition-based stats.
 Identities = 11/48 (22%), Positives = 23/48 (47%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
            +I + GFA S ++AR+ ++     +N    +   +Q+K+ D      
Sbjct: 102 NVIYRLGFANSRSQARQMVRHGIFTVNGRKATIPSIQVKVGDVIEVRE 149


>gi|21232076|ref|NP_637993.1| hypothetical protein XCC2645 [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66767798|ref|YP_242560.1| hypothetical protein XC_1472 [Xanthomonas campestris pv. campestris
           str. 8004]
 gi|21113819|gb|AAM41917.1| conserved hypothetical protein [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66573130|gb|AAY48540.1| conserved hypothetical protein [Xanthomonas campestris pv.
           campestris str. 8004]
          Length = 80

 Score = 36.7 bits (84), Expect = 7.8,   Method: Composition-based stats.
 Identities = 10/66 (15%), Positives = 26/66 (39%)

Query: 341 ISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG 400
           +  D     + L  L+  AG A S  + +  + S A+ ++      +  +I+        
Sbjct: 4   LEFDLDGEYIELNQLLKLAGIADSGGQGKAIVASGAVSVDGVQELRKTAKIRPGQLVQLD 63

Query: 401 NIKLSF 406
           ++++  
Sbjct: 64  DVEIRV 69


>gi|332559031|ref|ZP_08413353.1| lysyl-tRNA synthetase [Rhodobacter sphaeroides WS8N]
 gi|332276743|gb|EGJ22058.1| lysyl-tRNA synthetase [Rhodobacter sphaeroides WS8N]
          Length = 526

 Score = 36.7 bits (84), Expect = 7.9,   Method: Composition-based stats.
 Identities = 18/84 (21%), Positives = 27/84 (32%), Gaps = 4/84 (4%)

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            DF       D   +M G D   N      + E L   K    T  L     G K+ K+ 
Sbjct: 236 PDFGARWAALDVDFEMYGKDHSTNTPIYDGICEVLGGRKPEHFTYELFLDDKGEKISKSK 295

Query: 242 SGAI----WLNKEMTSPYNFWQYW 261
              +    WL    T   +++ + 
Sbjct: 296 GNGLTIDEWLTYASTESLSYFMFL 319


>gi|227501160|ref|ZP_03931209.1| ribosomal protein S4 [Anaerococcus tetradius ATCC 35098]
 gi|227216745|gb|EEI82146.1| ribosomal protein S4 [Anaerococcus tetradius ATCC 35098]
          Length = 197

 Score = 36.7 bits (84), Expect = 7.9,   Method: Composition-based stats.
 Identities = 7/44 (15%), Positives = 17/44 (38%)

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
           ++G A +  EAR+ +    + +N   +     ++   D      
Sbjct: 95  RSGLARTRREARQIVTHGHLTVNGVQVDIPSYKVSEGDVIEVRE 138


>gi|161528998|ref|YP_001582824.1| tryptophanyl-tRNA synthetase [Nitrosopumilus maritimus SCM1]
 gi|160340299|gb|ABX13386.1| tryptophanyl-tRNA synthetase [Nitrosopumilus maritimus SCM1]
          Length = 370

 Score = 36.7 bits (84), Expect = 7.9,   Method: Composition-based stats.
 Identities = 61/334 (18%), Positives = 105/334 (31%), Gaps = 58/334 (17%)

Query: 27  LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSF 86
           LD          Y G   +  + H GHL   +   WLQ+     +        +  D  F
Sbjct: 65  LDDYEKGNKFFLYTGRGPSGHT-HIGHLVPWVFAKWLQEKFDVNMYF-----QLTDDEKF 118

Query: 87  RDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGS 146
             +    +  +E +            FI  G       ++ N       + I  L  I +
Sbjct: 119 FSK--PNLTLEETKNFA---YENALDFIALGFKPEKTKIIIN------TRNIQTLYPIAA 167

Query: 147 FF--SVNRMLSFESVRSRLKREQSLSFLEFNYMILQ-AYDFVELAKNYDCRLQMGGSDQW 203
                +N   +  +       E +L  +   Y  LQ A  F+E   +    + +G  DQ 
Sbjct: 168 QVAKKINFSNTKATFG--FTNETNLGMI--FYTSLQSAPCFIE---DKPVLIPLG-VDQD 219

Query: 204 GNIICGIDLGERLKTPK---LFALTSPLLTTASGTKMGKT-LSGAIWLN------KEMTS 253
            +     D+  ++   K   +  +  P L    G KM  +  +G ++        K+  +
Sbjct: 220 PHFRLTRDIAPKIGKEKPALIHNIMIPALEGPGG-KMSASDENGTVYTTDAPNVVKKKIN 278

Query: 254 PYNF---------WQYWRNIDDADV-VSFAKRLTTLP----MSEIDRMAKLQGKEINEAK 299
            Y F          +      D DV   + +     P    +  I    K       E K
Sbjct: 279 KYAFSGGQPDLEQHRKLGGNPDIDVSYQYLRIF-FEPDDNKLKSIYEDYKSGKLLSGELK 337

Query: 300 KIIATEITTM--VHGREEAEKAATAAME-CFDMS 330
            I+  ++     VH +E  EKA     E  F+  
Sbjct: 338 AILIEKMNEFLAVH-QENREKAKDKIDEFLFENK 370


>gi|169604893|ref|XP_001795867.1| hypothetical protein SNOG_05462 [Phaeosphaeria nodorum SN15]
 gi|111065406|gb|EAT86526.1| hypothetical protein SNOG_05462 [Phaeosphaeria nodorum SN15]
          Length = 495

 Score = 36.7 bits (84), Expect = 7.9,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 19/51 (37%)

Query: 24  PRELDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLM 74
            + LD          Y G   ++ ++H GH        WLQ     P+ +M
Sbjct: 94  EQILDTYERGEDFLLYTGRGPSSDAMHIGHTIPFEFTKWLQDVFDVPLVIM 144


>gi|77464155|ref|YP_353659.1| lysyl-tRNA synthetase [Rhodobacter sphaeroides 2.4.1]
 gi|77388573|gb|ABA79758.1| lysyl-tRNA synthetase [Rhodobacter sphaeroides 2.4.1]
          Length = 526

 Score = 36.7 bits (84), Expect = 7.9,   Method: Composition-based stats.
 Identities = 18/84 (21%), Positives = 27/84 (32%), Gaps = 4/84 (4%)

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            DF       D   +M G D   N      + E L   K    T  L     G K+ K+ 
Sbjct: 236 PDFGARWAALDVDFEMYGKDHSTNTPIYDGICEVLGGRKPEHFTYELFLDDKGEKISKSK 295

Query: 242 SGAI----WLNKEMTSPYNFWQYW 261
              +    WL    T   +++ + 
Sbjct: 296 GNGLTIDEWLTYASTESLSYFMFL 319


>gi|126462998|ref|YP_001044112.1| lysyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17029]
 gi|126104662|gb|ABN77340.1| lysyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17029]
          Length = 526

 Score = 36.7 bits (84), Expect = 7.9,   Method: Composition-based stats.
 Identities = 18/84 (21%), Positives = 27/84 (32%), Gaps = 4/84 (4%)

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            DF       D   +M G D   N      + E L   K    T  L     G K+ K+ 
Sbjct: 236 PDFGARWAALDVDFEMYGKDHSTNTPIYDGICEVLGGRKPEHFTYELFLDDKGEKISKSK 295

Query: 242 SGAI----WLNKEMTSPYNFWQYW 261
              +    WL    T   +++ + 
Sbjct: 296 GNGLTIDEWLTYASTESLSYFMFL 319


>gi|317502014|ref|ZP_07960198.1| pseudouridine synthase [Lachnospiraceae bacterium 8_1_57FAA]
 gi|316896694|gb|EFV18781.1| pseudouridine synthase [Lachnospiraceae bacterium 8_1_57FAA]
          Length = 249

 Score = 36.7 bits (84), Expect = 7.9,   Method: Composition-based stats.
 Identities = 11/65 (16%), Positives = 25/65 (38%), Gaps = 9/65 (13%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           +    + L   + +AG   S  EA R ++S  + ++    +   +++            +
Sbjct: 16  QAKESVRLNKYLSEAGVC-SRREADRLIESGKVTVDGVT-AQMGMRVTAGQ-------IV 66

Query: 405 SFGKK 409
             GKK
Sbjct: 67  KVGKK 71


>gi|299115182|emb|CBN74013.1| RNA pseudouridylate synthase domain-containing protein (C-terminal)
           RNA pseudouridylate synthase dom [Ectocarpus
           siliculosus]
          Length = 490

 Score = 36.7 bits (84), Expect = 7.9,   Method: Composition-based stats.
 Identities = 10/50 (20%), Positives = 21/50 (42%), Gaps = 1/50 (2%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLS 405
           I ++G A S  EA R +++  + +N + +    L +  +D          
Sbjct: 119 IARSGIA-SRREAERMVEAGVVMVNGATVQTPALNVGPRDIVKVNVGLFQ 167


>gi|257067034|ref|YP_003153290.1| 30S ribosomal protein S4 [Anaerococcus prevotii DSM 20548]
 gi|256798914|gb|ACV29569.1| ribosomal protein S4 [Anaerococcus prevotii DSM 20548]
          Length = 197

 Score = 36.7 bits (84), Expect = 7.9,   Method: Composition-based stats.
 Identities = 7/44 (15%), Positives = 17/44 (38%)

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
           ++G A +  EAR+ +    + +N   +     ++   D      
Sbjct: 95  RSGLARTRREARQIVTHGHLTVNGKQVDIPSYKVSEGDVIEVRE 138


>gi|213965939|ref|ZP_03394129.1| ribosomal large subunit pseudouridine synthase B [Corynebacterium
           amycolatum SK46]
 gi|213951353|gb|EEB62745.1| ribosomal large subunit pseudouridine synthase B [Corynebacterium
           amycolatum SK46]
          Length = 324

 Score = 36.7 bits (84), Expect = 7.9,   Method: Composition-based stats.
 Identities = 8/53 (15%), Positives = 25/53 (47%), Gaps = 1/53 (1%)

Query: 342 SKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
           +  E   G+ L  ++ +AG   S   A + +    ++++  I++ + +++   
Sbjct: 76  AHSEAGEGVRLQKVLAQAG-VASRRMAEKLIDEGRVEVDGKIVTRQGVRVDPN 127


>gi|6172228|dbj|BAA85896.1| ribosomal protein HS4 [Halobacterium salinarum]
          Length = 169

 Score = 36.7 bits (84), Expect = 7.9,   Method: Composition-based stats.
 Identities = 5/36 (13%), Positives = 17/36 (47%)

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           G A +  +AR+ +    + ++ S ++     + + +
Sbjct: 109 GLANTMGQARQFVSHGHVTVDGSRVTEPSYTVPVSE 144


>gi|294630681|ref|ZP_06709241.1| tryptophanyl-tRNA synthetase [Streptomyces sp. e14]
 gi|292834014|gb|EFF92363.1| tryptophanyl-tRNA synthetase [Streptomyces sp. e14]
          Length = 333

 Score = 36.3 bits (83), Expect = 8.0,   Method: Composition-based stats.
 Identities = 31/222 (13%), Positives = 61/222 (27%), Gaps = 35/222 (15%)

Query: 34  GVVTAYIGYDLTASSLHAGHLTQLMLLFWL---QKTGHKPISLMGGGTSIIGDPSFRDES 90
            +   + G   T   L  G+      +       +     +  +    ++  D       
Sbjct: 2   EMTRVFSGIKPTG-HLTLGNYLG--AMRRWAEVDQYRADALFCVVDLHALTVDHDPARVR 58

Query: 91  RRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSV 150
           R           + +              +    + ++      + Y+  L  + +   +
Sbjct: 59  R-----------LSRQAATLLLAAGLDPERCTVFVQSHVDEHARLSYL--LECVATDGEM 105

Query: 151 NRMLS-FESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICG 209
            RM+   E       R  S+      Y +L A D +     Y       G DQ  ++   
Sbjct: 106 RRMIQYKEKAAREQARGGSVRLSLLTYPVLMAADILA----YGTDEVPVGDDQTQHVELA 161

Query: 210 IDLGERLKTPKLFALTSPLLTTAS-----------GTKMGKT 240
            DL  R         T P  T+ +            +KMGK+
Sbjct: 162 RDLAVRFNHRYGHTFTVPKATSPAVAARVMNLQDPASKMGKS 203


>gi|291542058|emb|CBL15168.1| SSU ribosomal protein S4P [Ruminococcus bromii L2-63]
          Length = 200

 Score = 36.3 bits (83), Expect = 8.0,   Method: Composition-based stats.
 Identities = 9/48 (18%), Positives = 20/48 (41%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
            +I + G A +  EAR+ +  +   +N   ++     +K+ D      
Sbjct: 93  NVIFRLGLAATRREARQLVSHSHFTVNGKKVNIPSYLVKVGDVIEVKE 140


>gi|289804520|ref|ZP_06535149.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. AG3]
          Length = 179

 Score = 36.3 bits (83), Expect = 8.0,   Method: Composition-based stats.
 Identities = 7/44 (15%), Positives = 13/44 (29%), Gaps = 4/44 (9%)

Query: 206 IICGIDLGERLKTPKLF----ALTSPLLTTASGTKMGKTLSGAI 245
           I+  +   +               + L+    G KM K+    I
Sbjct: 112 IMMTMHFIKDENGKPQVPFHTVYMTGLIRDDEGQKMSKSKGNVI 155


>gi|83647424|ref|YP_435859.1| 16S rRNA uridine-516 pseudouridylate synthase-like protein [Hahella
           chejuensis KCTC 2396]
 gi|83635467|gb|ABC31434.1| 16S rRNA uridine-516 pseudouridylate synthase and related
           pseudouridylate synthases [Hahella chejuensis KCTC 2396]
          Length = 323

 Score = 36.3 bits (83), Expect = 8.0,   Method: Composition-based stats.
 Identities = 12/57 (21%), Positives = 26/57 (45%), Gaps = 2/57 (3%)

Query: 342 SKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
              E ++G  L  +I + G A S  EA   +    +++N   +++   ++  +D  S
Sbjct: 4   PSGEKAQGEKLQKVIARQGLA-SRREAEEWISGGRVRVNG-KVAHLGDRVTAEDKIS 58


>gi|83591248|ref|YP_431257.1| 30S ribosomal protein S4 [Moorella thermoacetica ATCC 39073]
 gi|123725621|sp|Q2RFS5|RS4_MOOTA RecName: Full=30S ribosomal protein S4
 gi|83574162|gb|ABC20714.1| SSU ribosomal protein S4P [Moorella thermoacetica ATCC 39073]
          Length = 208

 Score = 36.3 bits (83), Expect = 8.0,   Method: Composition-based stats.
 Identities = 10/48 (20%), Positives = 20/48 (41%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
            ++ + GFA S  EAR  ++     +N   ++     ++  D  S   
Sbjct: 102 NVVYRLGFADSRAEARTLVRHGHFLVNGRKVNIPSYLVRPGDTISVRE 149


>gi|328955886|ref|YP_004373219.1| SSU ribosomal protein S4P [Coriobacterium glomerans PW2]
 gi|328456210|gb|AEB07404.1| SSU ribosomal protein S4P [Coriobacterium glomerans PW2]
          Length = 198

 Score = 36.3 bits (83), Expect = 8.1,   Method: Composition-based stats.
 Identities = 19/116 (16%), Positives = 40/116 (34%), Gaps = 14/116 (12%)

Query: 285 DRMAKLQGKEINEAKKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTISISKD 344
            R     G ++ E +K         ++G  E +             I  +++ T+     
Sbjct: 37  RRKESEYGTQLREKQKA------KFIYGVLEKQFRRYYFRALKMTGITGENLMTL----- 85

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG 400
                  L  ++ + GFA +  EAR+ ++     +N   +      +K  D  + G
Sbjct: 86  ---LETRLDNVVFRLGFARTRKEARQTVRHGHFTVNGHRVDIPSYLVKEGDVIAVG 138


>gi|73670608|ref|YP_306623.1| FtsJ-like methyltransferase [Methanosarcina barkeri str. Fusaro]
 gi|72397770|gb|AAZ72043.1| FtsJ-like methyltransferase [Methanosarcina barkeri str. Fusaro]
          Length = 236

 Score = 36.3 bits (83), Expect = 8.1,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 19/42 (45%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
           IV  G   S   A++ + +  +K+N ++I+     +   D  
Sbjct: 7   IVDMGHFKSRGRAKKAILAGNVKVNGAVITKASRDVSTDDII 48


>gi|291296964|ref|YP_003508362.1| 30S ribosomal protein S4 [Meiothermus ruber DSM 1279]
 gi|290471923|gb|ADD29342.1| ribosomal protein S4 [Meiothermus ruber DSM 1279]
          Length = 205

 Score = 36.3 bits (83), Expect = 8.1,   Method: Composition-based stats.
 Identities = 16/97 (16%), Positives = 40/97 (41%), Gaps = 9/97 (9%)

Query: 320 ATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKI 379
            T     F+ +   + + T ++    +   +    ++ + G A++  +AR+ ++   I +
Sbjct: 68  ETQFRNLFEEASRKKGV-TGTVFLQLLESRLD--NVVFRMGIASTRRQARQFVRHGHILV 124

Query: 380 NNSIISNEKLQIKLQDFDSTGNIKLS-FGKKNHIICH 415
           N   ++    +++  D      IK+S   KK   I  
Sbjct: 125 NGKRVNIPGYRVRPGD-----EIKVSEKAKKIDFIVQ 156


>gi|239623806|ref|ZP_04666837.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239521837|gb|EEQ61703.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 364

 Score = 36.3 bits (83), Expect = 8.1,   Method: Composition-based stats.
 Identities = 38/223 (17%), Positives = 67/223 (30%), Gaps = 36/223 (16%)

Query: 44  LTASSLHAGHLTQLMLLFWLQKT---GHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +    ++     G   I +M      + D +   E  R    +   
Sbjct: 11  PTGR-LHVGHYVGSLK-RRVELQNSGGFDEIYIMIADAQALTDNADNPEKVRQNIIEVAL 68

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           + +                K+   + +    LC + +  +     S    N  +  E   
Sbjct: 69  DYLACG---------LDPAKSVLFIQSQIPELCEMSFYYMDLVTVSRLQRNPTVKSEIQM 119

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPK 220
              +    + F  F Y I QA D           + +G  DQ   I    ++  +  +  
Sbjct: 120 RGFEASIPVGF--FTYPISQAADITAFKA---TTVPVG-EDQAPMIEQTREIVHKFNS-- 171

Query: 221 LFALT----SPLLTTA---------SGT-KMGKTLSGAIWLNK 249
           ++  T      LL             G  KM K+L   I+L+ 
Sbjct: 172 VYGETLVEPDILLPDNKACLRLPGIDGKAKMSKSLGNCIYLSD 214


>gi|114569060|ref|YP_755740.1| lysyl-tRNA synthetase [Maricaulis maris MCS10]
 gi|114339522|gb|ABI64802.1| lysyl-tRNA synthetase [Maricaulis maris MCS10]
          Length = 529

 Score = 36.3 bits (83), Expect = 8.1,   Method: Composition-based stats.
 Identities = 13/84 (15%), Positives = 23/84 (27%), Gaps = 4/84 (4%)

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            DF           +M G D   N      + + L           L     G K+ K+ 
Sbjct: 237 PDFGMRWAALGVDFEMFGKDHQTNAPVYSRICKILGAEPPTQFVYELFLDQKGEKISKSK 296

Query: 242 SGAI----WLNKEMTSPYNFWQYW 261
              +    WL        +++ + 
Sbjct: 297 GNGLSVEDWLKYAPAESLSYYNFV 320


>gi|325849498|ref|ZP_08170779.1| tryptophan--tRNA ligase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
 gi|325480118|gb|EGC83193.1| tryptophan--tRNA ligase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
          Length = 365

 Score = 36.3 bits (83), Expect = 8.2,   Method: Composition-based stats.
 Identities = 40/241 (16%), Positives = 69/241 (28%), Gaps = 36/241 (14%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGH--KPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
            T   LH GH    +     +Q  G+  K   ++    ++  +       R     + I 
Sbjct: 11  PTGK-LHLGHYVGSLKNRVKIQNEGNYDKMYIMIADAQALTDNFDNPKNIR-----ENIT 64

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVR 160
           E +     I          K    + +    L  + +  L     S    N  +  E   
Sbjct: 65  EVMLDYLSIG-----LDPNKVTFFVQSYVKELTELTFYLLNLVTLSRLERNPTVKTEIKS 119

Query: 161 SRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK--- 217
              +      FL   Y I Q  D +     +D  +   G DQ   +    +L        
Sbjct: 120 KNFETSLPTGFL--IYPISQTSDIIL----FDSNIVPVGEDQEPMLEQARELVRSFNHTY 173

Query: 218 -----TPKLFA----LTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNI-DDA 267
                 PK       +   L      +KM K+L   I+L+          +   ++  D 
Sbjct: 174 KEIFREPKAIIPENKVCRRLPGIDGSSKMSKSLDNCIYLSDSKK---EVKRKVMSMFTDP 230

Query: 268 D 268
           D
Sbjct: 231 D 231


>gi|315640101|ref|ZP_07895224.1| 30S ribosomal protein S4 [Enterococcus italicus DSM 15952]
 gi|315484148|gb|EFU74621.1| 30S ribosomal protein S4 [Enterococcus italicus DSM 15952]
          Length = 203

 Score = 36.3 bits (83), Expect = 8.2,   Method: Composition-based stats.
 Identities = 7/48 (14%), Positives = 18/48 (37%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
            ++ + G AT+  +AR+ +    I ++   +      + L        
Sbjct: 97  NVVYRLGLATTRRQARQLVNHGHITVDGKRVDIPSYHVDLGQVIGVRE 144


>gi|291614775|ref|YP_003524932.1| hypothetical protein Slit_2318 [Sideroxydans lithotrophicus ES-1]
 gi|291584887|gb|ADE12545.1| conserved hypothetical protein [Sideroxydans lithotrophicus ES-1]
          Length = 72

 Score = 36.3 bits (83), Expect = 8.2,   Method: Composition-based stats.
 Identities = 7/57 (12%), Positives = 23/57 (40%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
           + L  L+  +G   S    +  +    + ++  +   +  +I+     S G++++  
Sbjct: 14  IELCNLLKLSGVCDSGGAGKALVAEGVVSVDGQVELRKTAKIRAGQVVSAGDVQIRV 70


>gi|271962663|ref|YP_003336859.1| 30S ribosomal protein S4 [Streptosporangium roseum DSM 43021]
 gi|270505838|gb|ACZ84116.1| 30S ribosomal protein S4 [Streptosporangium roseum DSM 43021]
          Length = 208

 Score = 36.3 bits (83), Expect = 8.2,   Method: Composition-based stats.
 Identities = 10/48 (20%), Positives = 22/48 (45%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
            ++ +AGFA S + AR+ ++   I +N   +     +++  D      
Sbjct: 102 NVVYRAGFAESRDAARQQVRHGHILVNGKKVDIPSYRVREHDIVEVRE 149


>gi|60202594|gb|AAX14686.1| 30S ribosomal protein S4 [Phaeodactylum tricornutum]
          Length = 140

 Score = 36.3 bits (83), Expect = 8.2,   Method: Composition-based stats.
 Identities = 18/52 (34%), Positives = 24/52 (46%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
           M L TL    GFA S  +AR+ +    I IN  ++S    Q +L D  S   
Sbjct: 29  MRLDTLCFTLGFAKSLAQARQLVNHGHITINKKVVSIPSFQCRLNDIISIKE 80


>gi|15612517|ref|NP_224170.1| leucyl-tRNA synthetase [Helicobacter pylori J99]
 gi|6919983|sp|Q9ZJ63|SYL_HELPJ RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|4156066|gb|AAD07021.1| LEUCYL-TRNA SYNTHETASE [Helicobacter pylori J99]
          Length = 806

 Score = 36.3 bits (83), Expect = 8.2,   Method: Composition-based stats.
 Identities = 16/92 (17%), Positives = 26/92 (28%), Gaps = 11/92 (11%)

Query: 210 IDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWRNIDDADV 269
            DLG          L +  +    G KM K+    +       SP    + +     AD 
Sbjct: 546 RDLGYLHLDEPFKQLITQGMVLKDGAKMSKSKGNVV-------SPKEILKKY----GADA 594

Query: 270 VSFAKRLTTLPMSEIDRMAKLQGKEINEAKKI 301
           V         P  E++             K++
Sbjct: 595 VRLFILFAAPPAKELEWNDNALEGAHRFIKRL 626


>gi|77359062|ref|YP_338637.1| ribosomal RNA pseudouridylate synthase [Pseudoalteromonas
           haloplanktis TAC125]
 gi|76873973|emb|CAI85194.1| putative ribosomal RNA pseudouridylate synthase [Pseudoalteromonas
           haloplanktis TAC125]
          Length = 229

 Score = 36.3 bits (83), Expect = 8.3,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 20/54 (37%), Gaps = 1/54 (1%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
           + L   I  AG   S  +A R +   A+ +NN   ++     +       G I 
Sbjct: 5   IRLAKYIAHAGVC-SRKQASRLIDEGAVIVNNRPANHIDHVDEQDQITVNGQII 57


>gi|24638226|sp|Q97LD6|SYW_CLOAB RecName: Full=Tryptophanyl-tRNA synthetase; AltName:
           Full=Tryptophan--tRNA ligase; Short=TrpRS
 gi|325508041|gb|ADZ19677.1| tryptophanyl-tRNA synthetase [Clostridium acetobutylicum EA 2018]
          Length = 335

 Score = 36.3 bits (83), Expect = 8.3,   Method: Composition-based stats.
 Identities = 44/262 (16%), Positives = 80/262 (30%), Gaps = 46/262 (17%)

Query: 31  CSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTG-HKPISLMGGGTSIIGDPSFRDE 89
             +     + G   +   L  G+    +   W++    +     +    +I      +D 
Sbjct: 1   MGENKKVIFSGIQPSGE-LTIGNYFGAIK-NWVKLQDEYDCYYCIVDLHAITVKQEAKDL 58

Query: 90  SRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFS 149
            RR +  Q I   I        +   +      A +     W+  +  +  + E+     
Sbjct: 59  RRRTL--QLIATYIASGIDPEKN-TIFIQSHVPAHVQ--AQWI--LNCMSYVGEL----- 106

Query: 150 VNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICG 209
            +RM  F+    + + +  +     NY +L A D +     Y   L   G DQ  +I   
Sbjct: 107 -SRMTQFKDKSKKYE-DTGIGAGLLNYPVLMAADILI----YQADLVPVGKDQTQHIELT 160

Query: 210 IDLGERL-----------------KTPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMT 252
            DL +R                     K+ +L  PL       KM K+          M 
Sbjct: 161 RDLAQRFNSTYSETFKIPEGYIPTGGAKIMSLQEPL------KKMSKSSDNPNSFILIMD 214

Query: 253 SPYNFWQYW-RNIDDAD-VVSF 272
            P    +   R + D   VV +
Sbjct: 215 PPEVIKRKIARAVTDNVGVVKY 236


>gi|146276539|ref|YP_001166698.1| lysyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17025]
 gi|145554780|gb|ABP69393.1| lysyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17025]
          Length = 526

 Score = 36.3 bits (83), Expect = 8.3,   Method: Composition-based stats.
 Identities = 18/84 (21%), Positives = 27/84 (32%), Gaps = 4/84 (4%)

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            DF       D   +M G D   N      + E L   K    T  L     G K+ K+ 
Sbjct: 236 PDFGARWAALDVDFEMYGKDHSTNTPIYDGICEVLGGRKPEHFTYELFLDDKGEKISKSK 295

Query: 242 SGAI----WLNKEMTSPYNFWQYW 261
              +    WL    T   +++ + 
Sbjct: 296 GNGLTIDEWLTYASTESLSYFMFL 319


>gi|77414368|ref|ZP_00790523.1| ribosomal large subunit pseudouridine synthase B [Streptococcus
           agalactiae 515]
 gi|77159558|gb|EAO70714.1| ribosomal large subunit pseudouridine synthase B [Streptococcus
           agalactiae 515]
          Length = 240

 Score = 36.3 bits (83), Expect = 8.3,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 19/41 (46%), Gaps = 1/41 (2%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
           I  AG A S  +A   +K   + IN  +++    ++K  D 
Sbjct: 7   IAHAGIA-SRRKAEELIKQGMVTINGQVVNELATKVKAGDL 46


>gi|325920707|ref|ZP_08182613.1| hypothetical protein XGA_1592 [Xanthomonas gardneri ATCC 19865]
 gi|325548759|gb|EGD19707.1| hypothetical protein XGA_1592 [Xanthomonas gardneri ATCC 19865]
          Length = 80

 Score = 36.3 bits (83), Expect = 8.3,   Method: Composition-based stats.
 Identities = 10/66 (15%), Positives = 26/66 (39%)

Query: 341 ISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG 400
           +  D     + L  L+  AG A S  + +  + S A+ ++      +  +I+        
Sbjct: 4   LEFDLDGEYIELNQLLKLAGIADSGGQGKAIVASGAVSVDGVQELRKTAKIRPGQLVQLD 63

Query: 401 NIKLSF 406
           ++++  
Sbjct: 64  DVEIRV 69


>gi|325109283|ref|YP_004270351.1| RNA-binding S4 domain protein [Planctomyces brasiliensis DSM 5305]
 gi|324969551|gb|ADY60329.1| RNA-binding S4 domain protein [Planctomyces brasiliensis DSM 5305]
          Length = 80

 Score = 36.3 bits (83), Expect = 8.3,   Method: Composition-based stats.
 Identities = 10/61 (16%), Positives = 27/61 (44%)

Query: 342 SKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
             +  ++ + L   +  AGF  +  +A+  ++S  + +N  + +  + Q++  D    G 
Sbjct: 5   PNERDAKPLRLDHFLKLAGFVDTGGQAKMLIQSGEVLVNGQLETRRRRQLQPGDVIQLGE 64

Query: 402 I 402
            
Sbjct: 65  Y 65


>gi|150003363|ref|YP_001298107.1| 30S ribosomal protein S4 [Bacteroides vulgatus ATCC 8482]
 gi|212695280|ref|ZP_03303408.1| hypothetical protein BACDOR_04820 [Bacteroides dorei DSM 17855]
 gi|237711700|ref|ZP_04542181.1| 30S ribosomal protein S4 [Bacteroides sp. 9_1_42FAA]
 gi|237725859|ref|ZP_04556340.1| 30S ribosomal protein S4 [Bacteroides sp. D4]
 gi|265753119|ref|ZP_06088688.1| 30S ribosomal protein S4 [Bacteroides sp. 3_1_33FAA]
 gi|294777845|ref|ZP_06743289.1| ribosomal protein S4 [Bacteroides vulgatus PC510]
 gi|172048640|sp|A6KYH1|RS4_BACV8 RecName: Full=30S ribosomal protein S4
 gi|149931787|gb|ABR38485.1| 30S ribosomal protein S4 [Bacteroides vulgatus ATCC 8482]
 gi|212662190|gb|EEB22764.1| hypothetical protein BACDOR_04820 [Bacteroides dorei DSM 17855]
 gi|229435667|gb|EEO45744.1| 30S ribosomal protein S4 [Bacteroides dorei 5_1_36/D4]
 gi|229454395|gb|EEO60116.1| 30S ribosomal protein S4 [Bacteroides sp. 9_1_42FAA]
 gi|263236305|gb|EEZ21800.1| 30S ribosomal protein S4 [Bacteroides sp. 3_1_33FAA]
 gi|294448299|gb|EFG16855.1| ribosomal protein S4 [Bacteroides vulgatus PC510]
          Length = 201

 Score = 36.3 bits (83), Expect = 8.3,   Method: Composition-based stats.
 Identities = 9/82 (10%), Positives = 27/82 (32%), Gaps = 3/82 (3%)

Query: 320 ATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKI 379
                  F+ +  +  + T  I    +   +    ++ + G A +   AR+ +    I +
Sbjct: 65  EKQFRNLFEKAASANGI-TGEILLQSLEARLD--NVVFRLGIAPTRAAARQLVSHKHITV 121

Query: 380 NNSIISNEKLQIKLQDFDSTGN 401
           +  +++     +K         
Sbjct: 122 DGKVVNIPSFSVKPGQIVGVRE 143


>gi|256847990|ref|ZP_05553434.1| ribosomal protein S4 [Lactobacillus coleohominis 101-4-CHN]
 gi|256715050|gb|EEU30027.1| ribosomal protein S4 [Lactobacillus coleohominis 101-4-CHN]
          Length = 202

 Score = 36.3 bits (83), Expect = 8.4,   Method: Composition-based stats.
 Identities = 6/44 (13%), Positives = 17/44 (38%)

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
           + G AT+  +AR+ +    I ++   +     ++ +        
Sbjct: 101 RLGLATTRRQARQLVNHGHITVDGKRVDIPSYEVSVDQVIGVRE 144


>gi|225868958|ref|YP_002744906.1| hypothetical protein SZO_13920 [Streptococcus equi subsp.
           zooepidemicus]
 gi|225702234|emb|CAW99980.1| conserved hypothetical protein [Streptococcus equi subsp.
           zooepidemicus]
          Length = 264

 Score = 36.3 bits (83), Expect = 8.4,   Method: Composition-based stats.
 Identities = 8/50 (16%), Positives = 22/50 (44%)

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNI 402
           +  ++      S N+A R +++  +K+N  +++     + + D  S    
Sbjct: 188 VDRLIATVLKQSRNQAIRLVEAGKVKVNYQLVTKASQPVAIGDLISIRGY 237


>gi|157363887|ref|YP_001470654.1| RNA-binding S4 domain-containing protein [Thermotoga lettingae TMO]
 gi|157314491|gb|ABV33590.1| RNA-binding S4 domain protein [Thermotoga lettingae TMO]
          Length = 234

 Score = 36.3 bits (83), Expect = 8.4,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 19/47 (40%), Gaps = 1/47 (2%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
           M L   +  A    + +E R+ +K   I +N  I+ N    I   D 
Sbjct: 1   MRLDRFLANAKI-GTRSEVRKIIKKGEISVNGEIVKNISFHINETDI 46


>gi|331088168|ref|ZP_08337088.1| hypothetical protein HMPREF1025_00671 [Lachnospiraceae bacterium
           3_1_46FAA]
 gi|330408824|gb|EGG88287.1| hypothetical protein HMPREF1025_00671 [Lachnospiraceae bacterium
           3_1_46FAA]
          Length = 244

 Score = 36.3 bits (83), Expect = 8.5,   Method: Composition-based stats.
 Identities = 10/54 (18%), Positives = 22/54 (40%), Gaps = 9/54 (16%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKK 409
           + +AG   S  EA R ++S  + ++    +   +++            +  GKK
Sbjct: 22  LSEAGVC-SRREADRLIESGKVTVDGVT-AQMGMRVTAGQ-------IVKVGKK 66


>gi|323254500|gb|EGA38311.1| 23S rRNA pseudouridine synthase F [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008282]
          Length = 289

 Score = 36.3 bits (83), Expect = 8.5,   Method: Composition-based stats.
 Identities = 9/48 (18%), Positives = 17/48 (35%), Gaps = 1/48 (2%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
           I ++G   S  EA R ++   + IN    +     +        G + 
Sbjct: 13  ISESGIC-SRREADRFIEQGNVFINGKRAAIGDQVVSGDVVKVNGRLI 59


>gi|322615369|gb|EFY12289.1| 23S rRNA pseudouridine synthase F [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315996572]
 gi|322618430|gb|EFY15319.1| 23S rRNA pseudouridine synthase F [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-1]
 gi|322622159|gb|EFY19009.1| 23S rRNA pseudouridine synthase F [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-3]
 gi|322627229|gb|EFY24021.1| 23S rRNA pseudouridine synthase F [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-4]
 gi|322631190|gb|EFY27954.1| 23S rRNA pseudouridine synthase F [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-1]
 gi|322637592|gb|EFY34293.1| 23S rRNA pseudouridine synthase F [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-2]
 gi|322642558|gb|EFY39155.1| 23S rRNA pseudouridine synthase F [Salmonella enterica subsp.
           enterica serovar Montevideo str. 531954]
 gi|322643574|gb|EFY40129.1| 23S rRNA pseudouridine synthase F [Salmonella enterica subsp.
           enterica serovar Montevideo str. NC_MB110209-0054]
 gi|322648310|gb|EFY44769.1| 23S rRNA pseudouridine synthase F [Salmonella enterica subsp.
           enterica serovar Montevideo str. OH_2009072675]
 gi|322654619|gb|EFY50939.1| 23S rRNA pseudouridine synthase F [Salmonella enterica subsp.
           enterica serovar Montevideo str. CASC_09SCPH15965]
 gi|322659579|gb|EFY55822.1| 23S rRNA pseudouridine synthase F [Salmonella enterica subsp.
           enterica serovar Montevideo str. 19N]
 gi|322662213|gb|EFY58429.1| 23S rRNA pseudouridine synthase F [Salmonella enterica subsp.
           enterica serovar Montevideo str. 81038-01]
 gi|322666043|gb|EFY62221.1| 23S rRNA pseudouridine synthase F [Salmonella enterica subsp.
           enterica serovar Montevideo str. MD_MDA09249507]
 gi|322672462|gb|EFY68573.1| 23S rRNA pseudouridine synthase F [Salmonella enterica subsp.
           enterica serovar Montevideo str. 414877]
 gi|322675891|gb|EFY71962.1| 23S rRNA pseudouridine synthase F [Salmonella enterica subsp.
           enterica serovar Montevideo str. 366867]
 gi|322680375|gb|EFY76413.1| 23S rRNA pseudouridine synthase F [Salmonella enterica subsp.
           enterica serovar Montevideo str. 413180]
 gi|322684730|gb|EFY80734.1| 23S rRNA pseudouridine synthase F [Salmonella enterica subsp.
           enterica serovar Montevideo str. 446600]
 gi|323195994|gb|EFZ81160.1| 23S rRNA pseudouridine synthase F [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609458-1]
 gi|323197076|gb|EFZ82217.1| 23S rRNA pseudouridine synthase F [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556150-1]
 gi|323202220|gb|EFZ87270.1| 23S rRNA pseudouridine synthase F [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609460]
 gi|323206320|gb|EFZ91282.1| 23S rRNA pseudouridine synthase F [Salmonella enterica subsp.
           enterica serovar Montevideo str. 507440-20]
 gi|323213332|gb|EFZ98134.1| 23S rRNA pseudouridine synthase F [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556152]
 gi|323215701|gb|EGA00445.1| 23S rRNA pseudouridine synthase F [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB101509-0077]
 gi|323222124|gb|EGA06510.1| 23S rRNA pseudouridine synthase F [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB102109-0047]
 gi|323226535|gb|EGA10741.1| 23S rRNA pseudouridine synthase F [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB110209-0055]
 gi|323229161|gb|EGA13290.1| 23S rRNA pseudouridine synthase F [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB111609-0052]
 gi|323236230|gb|EGA20306.1| 23S rRNA pseudouridine synthase F [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009083312]
 gi|323237651|gb|EGA21712.1| 23S rRNA pseudouridine synthase F [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009085258]
 gi|323241684|gb|EGA25713.1| 23S rRNA pseudouridine synthase F [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315731156]
 gi|323248169|gb|EGA32106.1| 23S rRNA pseudouridine synthase F [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2009159199]
 gi|323258439|gb|EGA42116.1| 23S rRNA pseudouridine synthase F [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008283]
 gi|323259719|gb|EGA43353.1| 23S rRNA pseudouridine synthase F [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008284]
 gi|323265992|gb|EGA49488.1| 23S rRNA pseudouridine synthase F [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008285]
 gi|323270434|gb|EGA53882.1| 23S rRNA pseudouridine synthase F [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008287]
          Length = 289

 Score = 36.3 bits (83), Expect = 8.5,   Method: Composition-based stats.
 Identities = 9/48 (18%), Positives = 17/48 (35%), Gaps = 1/48 (2%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
           I ++G   S  EA R ++   + IN    +     +        G + 
Sbjct: 13  ISESGIC-SRREADRFIEQGNVFINGKRAAIGDQVVSGDVVKVNGRLI 59


>gi|307700543|ref|ZP_07637577.1| tryptophan--tRNA ligase [Mobiluncus mulieris FB024-16]
 gi|307614264|gb|EFN93499.1| tryptophan--tRNA ligase [Mobiluncus mulieris FB024-16]
          Length = 381

 Score = 36.3 bits (83), Expect = 8.5,   Method: Composition-based stats.
 Identities = 34/241 (14%), Positives = 66/241 (27%), Gaps = 46/241 (19%)

Query: 44  LTASSLHAGHLTQLMLLF-WLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQEN 102
            T   LH GH    +     LQ  G     L+          + RD    +   + +   
Sbjct: 53  PTG-FLHIGHYFGTLKSRVELQNLGIDTTVLIADY----QVITDRDNIGNV--REYVLNL 105

Query: 103 IEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYI-DLLREIGSFFSVNRMLSFESVRS 161
           +       ++ I                    +  I ++L    S  +   +    +V++
Sbjct: 106 VADY---LAAGIDPAKSTIFCH--------SQVPAIHEMLVIFLSLVTEAELHRNPTVKA 154

Query: 162 RLKRE-QSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNI----ICGIDLGERL 216
            ++   + ++ L   Y + QA D +    N    L   G DQ  ++    +      +R 
Sbjct: 155 EMEAAARPMTGLLLTYPVHQAADILCAQAN----LVPVGQDQLPHLEQTRVVAKRFNKRY 210

Query: 217 KTPKLFA-------LTSPL----------LTTASGTKMGKTLSGAIWLNKEMTSPYNFWQ 259
                            PL          +    G KM K+    + L           +
Sbjct: 211 PQRDAAGNKVKDSRGVLPLAQALLGRGSMILGTDGQKMSKSRHNTVELGASAEETAKIIK 270

Query: 260 Y 260
            
Sbjct: 271 K 271


>gi|301057497|ref|ZP_07198593.1| ribosomal protein S4 [delta proteobacterium NaphS2]
 gi|300448425|gb|EFK12094.1| ribosomal protein S4 [delta proteobacterium NaphS2]
          Length = 209

 Score = 36.3 bits (83), Expect = 8.5,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 23/48 (47%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
            ++ K GFA S  +AR+ ++ N   +N   ++    Q+K+ D      
Sbjct: 103 NVVYKMGFAASRTQARQLIRHNHFLVNQKKVNIPSYQVKVGDVVEAKE 150


>gi|255023947|ref|ZP_05295933.1| tryptophanyl-tRNA synthetase [Listeria monocytogenes FSL J1-208]
          Length = 239

 Score = 36.3 bits (83), Expect = 8.5,   Method: Composition-based stats.
 Identities = 29/150 (19%), Positives = 49/150 (32%), Gaps = 32/150 (21%)

Query: 143 EIGSFFSVNRMLSFES----------VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYD 192
           E+ +      +L               + +   +  +S     Y  L A D +     Y 
Sbjct: 83  EVAAHAQAAWILQCNVYIGELERMTQFKDKSAGKAGVSAGLLTYPPLMAADILL----YQ 138

Query: 193 CRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSP----------LLTTASGT-KMGKT- 240
             L   G DQ  +I    DL ER         T P          +++    T KM K+ 
Sbjct: 139 TDLVPVGEDQKQHIELTRDLAERFNKKHADIFTMPEVFIPKQGARVMSLQDPTKKMSKSD 198

Query: 241 --LSGAIWLNKEMTSPYNFWQYWRN-IDDA 267
             L  AI+L   +  P    +  ++ + D+
Sbjct: 199 ANLKNAIFL---LDPPATIRKKIKSAVTDS 225


>gi|258515575|ref|YP_003191797.1| pseudouridine synthase, RluA family [Desulfotomaculum acetoxidans
           DSM 771]
 gi|257779280|gb|ACV63174.1| pseudouridine synthase, RluA family [Desulfotomaculum acetoxidans
           DSM 771]
          Length = 305

 Score = 36.3 bits (83), Expect = 8.5,   Method: Composition-based stats.
 Identities = 8/35 (22%), Positives = 19/35 (54%), Gaps = 1/35 (2%)

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
           S ++ +R +    ++IN   ++  K +IK  D+ +
Sbjct: 28  SRSQLQRLIAQGLVEINGKKVA-AKYKIKPGDYIN 61


>gi|227510307|ref|ZP_03940356.1| pseudouridylate synthase [Lactobacillus brevis subsp. gravesensis
           ATCC 27305]
 gi|227189959|gb|EEI70026.1| pseudouridylate synthase [Lactobacillus brevis subsp. gravesensis
           ATCC 27305]
          Length = 241

 Score = 36.3 bits (83), Expect = 8.5,   Method: Composition-based stats.
 Identities = 9/55 (16%), Positives = 22/55 (40%), Gaps = 1/55 (1%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
           L  ++  AG   S  +A + +    +K+N  ++     ++   D      + +S 
Sbjct: 5   LQKVMAHAG-VASRRKAEKLIVEGHVKVNGKVVRELGTKVTESDEVEVDEVPISK 58


>gi|221142140|ref|ZP_03566633.1| tryptophanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           str. JKD6009]
 gi|302750822|gb|ADL64999.1| putative tryptophanyl-tRNA synthetase [Staphylococcus aureus subsp.
           aureus str. JKD6008]
          Length = 329

 Score = 36.3 bits (83), Expect = 8.5,   Method: Composition-based stats.
 Identities = 51/302 (16%), Positives = 94/302 (31%), Gaps = 51/302 (16%)

Query: 37  TAYIGYDLTA-SSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMR 95
           T + G   +       G+    +  F   +  +     +    + I  P  R + R+  R
Sbjct: 3   TLFSGIQPSGIP--TIGNYIGALKQFVDVQNDYDCYFCIVDQHA-ITMPQDRLKLRKQTR 59

Query: 96  SQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLS 155
                     I       I +   +  A +     W        +L  I S   + RM  
Sbjct: 60  QLAAIYLASGIDP--DKAILFIQSEVPAHVQ--AGW--------MLTTIASVGELERMTQ 107

Query: 156 FESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGER 215
           ++    +         L   Y  L A D V     Y+  +   G DQ  +I    +L +R
Sbjct: 108 YKDKAQKAVEGIPAGLL--TYPPLMAADIVL----YNTNIVPVGDDQKQHIELTRNLVDR 161

Query: 216 LKTPKLFALTSPLL--TTASGT---------KMGKTLSGAIWLNKEMTSPYNFWQYWRN- 263
             +     L  P +      G          KM K+   A      +  P    +  ++ 
Sbjct: 162 FNSRYNDVLVKPEIRMPKVGGRVMSLQDPTRKMSKSDDNAKNFISLLDEPNVAAKKIKSA 221

Query: 264 IDDAD---------------VVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATEITT 308
           + D+D               ++S    LT  P+ +I+  AK +G+   + K  +A  +  
Sbjct: 222 VTDSDGIIKFDRDNKPGITNLISIYAGLTDKPIKDIE--AKYEGEGYGKFKGDLAEIVKA 279

Query: 309 MV 310
            +
Sbjct: 280 FL 281


>gi|328951209|ref|YP_004368544.1| ribosomal protein S4 [Marinithermus hydrothermalis DSM 14884]
 gi|328451533|gb|AEB12434.1| ribosomal protein S4 [Marinithermus hydrothermalis DSM 14884]
          Length = 205

 Score = 36.3 bits (83), Expect = 8.5,   Method: Composition-based stats.
 Identities = 12/79 (15%), Positives = 31/79 (39%), Gaps = 3/79 (3%)

Query: 320 ATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKI 379
                  F+ +   + + T ++    +   +    ++ + G AT+  +AR+ +    I +
Sbjct: 68  EKQFRNLFEEATRKKGV-TGTVFLQLLESRLD--NVVFRLGIATTRRQARQFVVHRHILV 124

Query: 380 NNSIISNEKLQIKLQDFDS 398
           N   +     ++K  D  S
Sbjct: 125 NGKRVDRPSYRVKPGDVIS 143


>gi|323478100|gb|ADX83338.1| ribosomal protein S4 [Sulfolobus islandicus HVE10/4]
          Length = 181

 Score = 36.3 bits (83), Expect = 8.5,   Method: Composition-based stats.
 Identities = 10/52 (19%), Positives = 24/52 (46%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
           L T++ K G A +T +AR+ +    I +N   +++    + + + +      
Sbjct: 106 LQTIVYKKGLANTTYQARQLIIHGHIAVNGKRVTSPGYIVNVDEENLIDYYV 157


>gi|254881348|ref|ZP_05254058.1| 30S ribosomal protein S4 [Bacteroides sp. 4_3_47FAA]
 gi|319640349|ref|ZP_07995074.1| hypothetical protein HMPREF9011_00671 [Bacteroides sp. 3_1_40A]
 gi|254834141|gb|EET14450.1| 30S ribosomal protein S4 [Bacteroides sp. 4_3_47FAA]
 gi|317388124|gb|EFV68978.1| hypothetical protein HMPREF9011_00671 [Bacteroides sp. 3_1_40A]
          Length = 201

 Score = 36.3 bits (83), Expect = 8.5,   Method: Composition-based stats.
 Identities = 9/82 (10%), Positives = 27/82 (32%), Gaps = 3/82 (3%)

Query: 320 ATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKI 379
                  F+ +  +  + T  I    +   +    ++ + G A +   AR+ +    I +
Sbjct: 65  EKQFRNLFEKAASANGI-TGEILLQSLEARLD--NVVFRLGIAPTRAAARQLVSHKHITV 121

Query: 380 NNSIISNEKLQIKLQDFDSTGN 401
           +  +++     +K         
Sbjct: 122 DGKVVNIPSFSVKPGQIVGVRE 143


>gi|227828305|ref|YP_002830085.1| 30S ribosomal protein S4P [Sulfolobus islandicus M.14.25]
 gi|227831063|ref|YP_002832843.1| 30S ribosomal protein S4P [Sulfolobus islandicus L.S.2.15]
 gi|229579944|ref|YP_002838343.1| 30S ribosomal protein S4P [Sulfolobus islandicus Y.G.57.14]
 gi|229581395|ref|YP_002839794.1| 30S ribosomal protein S4P [Sulfolobus islandicus Y.N.15.51]
 gi|229585535|ref|YP_002844037.1| 30S ribosomal protein S4P [Sulfolobus islandicus M.16.27]
 gi|238620497|ref|YP_002915323.1| 30S ribosomal protein S4P [Sulfolobus islandicus M.16.4]
 gi|284998559|ref|YP_003420327.1| ribosomal protein S4 [Sulfolobus islandicus L.D.8.5]
 gi|259495293|sp|C3N052|RS4_SULIA RecName: Full=30S ribosomal protein S4P
 gi|259495294|sp|C4KJ91|RS4_SULIK RecName: Full=30S ribosomal protein S4P
 gi|259495295|sp|C3MJP5|RS4_SULIL RecName: Full=30S ribosomal protein S4P
 gi|259495296|sp|C3MZ03|RS4_SULIM RecName: Full=30S ribosomal protein S4P
 gi|259495297|sp|C3NMQ2|RS4_SULIN RecName: Full=30S ribosomal protein S4P
 gi|259495298|sp|C3N8R6|RS4_SULIY RecName: Full=30S ribosomal protein S4P
 gi|227457511|gb|ACP36198.1| ribosomal protein S4 [Sulfolobus islandicus L.S.2.15]
 gi|227460101|gb|ACP38787.1| ribosomal protein S4 [Sulfolobus islandicus M.14.25]
 gi|228010659|gb|ACP46421.1| ribosomal protein S4 [Sulfolobus islandicus Y.G.57.14]
 gi|228012111|gb|ACP47872.1| ribosomal protein S4 [Sulfolobus islandicus Y.N.15.51]
 gi|228020585|gb|ACP55992.1| ribosomal protein S4 [Sulfolobus islandicus M.16.27]
 gi|238381567|gb|ACR42655.1| ribosomal protein S4 [Sulfolobus islandicus M.16.4]
 gi|284446455|gb|ADB87957.1| ribosomal protein S4 [Sulfolobus islandicus L.D.8.5]
 gi|323475375|gb|ADX85981.1| ribosomal protein S4 [Sulfolobus islandicus REY15A]
          Length = 181

 Score = 36.3 bits (83), Expect = 8.5,   Method: Composition-based stats.
 Identities = 10/52 (19%), Positives = 24/52 (46%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIK 403
           L T++ K G A +T +AR+ +    I +N   +++    + + + +      
Sbjct: 106 LQTIVYKKGLANTTYQARQLIIHGHIAVNGKRVTSPGYIVNVDEENLIDYYV 157


>gi|326780298|ref|ZP_08239563.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Streptomyces cf. griseus XylebKG-1]
 gi|326660631|gb|EGE45477.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Streptomyces cf. griseus XylebKG-1]
          Length = 409

 Score = 36.3 bits (83), Expect = 8.6,   Method: Composition-based stats.
 Identities = 17/137 (12%), Positives = 39/137 (28%), Gaps = 6/137 (4%)

Query: 192 DCRLQMGGSDQWG--NIICGIDLGERLKTPK-LFALTSPLLTTASGTKMGKTLSGAIW-- 246
              +Q GGSD     + +                A     +    G KM K+    ++  
Sbjct: 239 GFDIQGGGSDLAFPHHEMGASHAQALTGEHPFAKAYVHAGMVGLDGEKMSKSRGNLVFVS 298

Query: 247 -LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
            L +E   P        +        +  ++    +  + R      +    + + +  E
Sbjct: 299 TLRREGVDPAALRLALLSRHYRSDWEWTDQVLAEAVERLARWRAAVSRPDGPSAEALVEE 358

Query: 306 ITTMVHGREEAEKAATA 322
           +   +    ++  A  A
Sbjct: 359 VREALADDLDSPAALAA 375


>gi|184153141|ref|YP_001841482.1| 30S ribosomal protein S4 [Lactobacillus reuteri JCM 1112]
 gi|226699080|sp|B2G6C0|RS4_LACRJ RecName: Full=30S ribosomal protein S4
 gi|183224485|dbj|BAG25002.1| 30S ribosomal protein S4 [Lactobacillus reuteri JCM 1112]
          Length = 201

 Score = 36.3 bits (83), Expect = 8.6,   Method: Composition-based stats.
 Identities = 7/41 (17%), Positives = 19/41 (46%)

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
           + G AT+  +AR+ +    I ++   +     ++K+    +
Sbjct: 101 RLGLATTRRQARQLVNHGHITVDGKRVDIPSYEVKVGQIIA 141


>gi|182439633|ref|YP_001827352.1| cysteinyl-tRNA synthetase [Streptomyces griseus subsp. griseus NBRC
           13350]
 gi|310947221|sp|B1W2Y7|MSHC_STRGG RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|178468149|dbj|BAG22669.1| putative cysteinyl-tRNA synthetase [Streptomyces griseus subsp.
           griseus NBRC 13350]
          Length = 409

 Score = 36.3 bits (83), Expect = 8.6,   Method: Composition-based stats.
 Identities = 17/137 (12%), Positives = 39/137 (28%), Gaps = 6/137 (4%)

Query: 192 DCRLQMGGSDQWG--NIICGIDLGERLKTPK-LFALTSPLLTTASGTKMGKTLSGAIW-- 246
              +Q GGSD     + +                A     +    G KM K+    ++  
Sbjct: 239 GFDIQGGGSDLAFPHHEMGASHAQALTGEHPFAKAYVHAGMVGLDGEKMSKSRGNLVFVS 298

Query: 247 -LNKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGKEINEAKKIIATE 305
            L +E   P        +        +  ++    +  + R      +    + + +  E
Sbjct: 299 TLRREGVDPAALRLALLSRHYRSDWEWTDQVLAEAVERLARWRAAVSRPDGPSAEALVEE 358

Query: 306 ITTMVHGREEAEKAATA 322
           +   +    ++  A  A
Sbjct: 359 VREALADDLDSPAALAA 375


>gi|163797848|ref|ZP_02191793.1| Pseudouridine synthase, Rsu [alpha proteobacterium BAL199]
 gi|159176892|gb|EDP61459.1| Pseudouridine synthase, Rsu [alpha proteobacterium BAL199]
          Length = 387

 Score = 36.3 bits (83), Expect = 8.6,   Method: Composition-based stats.
 Identities = 6/42 (14%), Positives = 19/42 (45%), Gaps = 1/42 (2%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
           + +AG   S  +A R +    +K++  ++++  + +      
Sbjct: 15  LARAGLC-SRRDAERWIAEGRVKVDGVMLTSPAVNVDDDSVI 55


>gi|148543735|ref|YP_001271105.1| 30S ribosomal protein S4 [Lactobacillus reuteri DSM 20016]
 gi|194468296|ref|ZP_03074282.1| ribosomal protein S4 [Lactobacillus reuteri 100-23]
 gi|227363285|ref|ZP_03847417.1| 30S ribosomal protein S4 [Lactobacillus reuteri MM2-3]
 gi|227544238|ref|ZP_03974287.1| 30S ribosomal protein S4 [Lactobacillus reuteri CF48-3A]
 gi|300908234|ref|ZP_07125700.1| 30S ribosomal protein S4 [Lactobacillus reuteri SD2112]
 gi|325682107|ref|ZP_08161625.1| 30S ribosomal protein S4 [Lactobacillus reuteri MM4-1A]
 gi|172048234|sp|A5VIU4|RS4_LACRD RecName: Full=30S ribosomal protein S4
 gi|148530769|gb|ABQ82768.1| SSU ribosomal protein S4P [Lactobacillus reuteri DSM 20016]
 gi|194453149|gb|EDX42047.1| ribosomal protein S4 [Lactobacillus reuteri 100-23]
 gi|227071741|gb|EEI10032.1| 30S ribosomal protein S4 [Lactobacillus reuteri MM2-3]
 gi|227185791|gb|EEI65862.1| 30S ribosomal protein S4 [Lactobacillus reuteri CF48-3A]
 gi|300894661|gb|EFK88017.1| 30S ribosomal protein S4 [Lactobacillus reuteri SD2112]
 gi|324978751|gb|EGC15700.1| 30S ribosomal protein S4 [Lactobacillus reuteri MM4-1A]
          Length = 201

 Score = 36.3 bits (83), Expect = 8.6,   Method: Composition-based stats.
 Identities = 7/41 (17%), Positives = 19/41 (46%)

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
           + G AT+  +AR+ +    I ++   +     ++K+    +
Sbjct: 101 RLGLATTRRQARQLVNHGHITVDGKRVDIPSYEVKVGQIIA 141


>gi|23099660|ref|NP_693126.1| 30S ribosomal protein S4 [Oceanobacillus iheyensis HTE831]
 gi|26399359|sp|P59130|RS4_OCEIH RecName: Full=30S ribosomal protein S4
 gi|22777890|dbj|BAC14161.1| 30S ribosomal protein S4 [Oceanobacillus iheyensis HTE831]
          Length = 200

 Score = 36.3 bits (83), Expect = 8.6,   Method: Composition-based stats.
 Identities = 12/82 (14%), Positives = 24/82 (29%), Gaps = 3/82 (3%)

Query: 320 ATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKI 379
                  FD    +  M  I      +     L  L+ + G A +  +AR+ +    + +
Sbjct: 65  ERQFRTLFDK---AGKMKGIHGENFMILLESRLDNLVYRLGLARTRRQARQLVNHGHVTV 121

Query: 380 NNSIISNEKLQIKLQDFDSTGN 401
           +   +      IK         
Sbjct: 122 DGGRVDIPSYAIKPGQVIGLRE 143


>gi|25011682|ref|NP_736077.1| ribosomal large subunit pseudouridine synthase B [Streptococcus
           agalactiae NEM316]
 gi|24413222|emb|CAD47301.1| Unknown [Streptococcus agalactiae NEM316]
          Length = 240

 Score = 36.3 bits (83), Expect = 8.6,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 19/41 (46%), Gaps = 1/41 (2%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
           I  AG A S  +A   +K   + IN  +++    ++K  D 
Sbjct: 7   IAHAGIA-SRRKAEELIKQGMVTINGQVVNELATKVKAGDL 46


>gi|116493045|ref|YP_804780.1| 30S ribosomal protein S4 [Pediococcus pentosaceus ATCC 25745]
 gi|122265491|sp|Q03EN4|RS4_PEDPA RecName: Full=30S ribosomal protein S4
 gi|116103195|gb|ABJ68338.1| SSU ribosomal protein S4P [Pediococcus pentosaceus ATCC 25745]
          Length = 202

 Score = 36.3 bits (83), Expect = 8.6,   Method: Composition-based stats.
 Identities = 6/44 (13%), Positives = 18/44 (40%)

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
           + G AT+  +AR+ +    I ++   +     ++++        
Sbjct: 101 RLGLATTRRQARQLVNHGHITVDGKRVDIPSYEVEIGQVIGVRE 144


>gi|313895093|ref|ZP_07828650.1| ribosomal protein S4 [Selenomonas sp. oral taxon 137 str. F0430]
 gi|320529822|ref|ZP_08030899.1| ribosomal protein S4 [Selenomonas artemidis F0399]
 gi|312975988|gb|EFR41446.1| ribosomal protein S4 [Selenomonas sp. oral taxon 137 str. F0430]
 gi|320137840|gb|EFW29745.1| ribosomal protein S4 [Selenomonas artemidis F0399]
          Length = 197

 Score = 36.3 bits (83), Expect = 8.7,   Method: Composition-based stats.
 Identities = 10/57 (17%), Positives = 21/57 (36%), Gaps = 8/57 (14%)

Query: 349 GMGLLTLI--------VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
           G  LL+L+         + G A +  +AR+ ++     +N   +      +   D  
Sbjct: 78  GENLLSLLERRIDNVVFRLGLANTRRQARQLVRHGHFTVNGKRVDIPSALVHEGDVI 134


>gi|255292032|dbj|BAH90515.1| hemolysin A [uncultured bacterium]
 gi|255292929|dbj|BAH90027.1| hemolysin A [uncultured bacterium]
          Length = 249

 Score = 36.3 bits (83), Expect = 8.7,   Method: Composition-based stats.
 Identities = 7/23 (30%), Positives = 15/23 (65%)

Query: 354 TLIVKAGFATSTNEARRHLKSNA 376
            ++V+ G A S ++A+R + + A
Sbjct: 5   QVLVERGLAASRSQAQRLIAAGA 27


>gi|323339475|ref|ZP_08079754.1| 30S ribosomal protein S4 [Lactobacillus ruminis ATCC 25644]
 gi|323093089|gb|EFZ35682.1| 30S ribosomal protein S4 [Lactobacillus ruminis ATCC 25644]
          Length = 202

 Score = 36.3 bits (83), Expect = 8.7,   Method: Composition-based stats.
 Identities = 8/48 (16%), Positives = 20/48 (41%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
            ++ + G AT+  +AR+ +    I ++   +     ++K     S   
Sbjct: 97  NVVYRLGLATTRRQARQLVNHGHITVDGKRVDIPSYEVKPGQVISLRE 144


>gi|224541350|ref|ZP_03681889.1| hypothetical protein CATMIT_00510 [Catenibacterium mitsuokai DSM
           15897]
 gi|224525684|gb|EEF94789.1| hypothetical protein CATMIT_00510 [Catenibacterium mitsuokai DSM
           15897]
          Length = 247

 Score = 36.3 bits (83), Expect = 8.7,   Method: Composition-based stats.
 Identities = 7/44 (15%), Positives = 22/44 (50%), Gaps = 1/44 (2%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           L  +I ++G+  S  +A   ++   + +N  +++    ++  +D
Sbjct: 5   LQKVIAQSGYT-SRRKAEELIQQGKVTVNGEVVTVLGTKVTKKD 47


>gi|167749411|ref|ZP_02421538.1| hypothetical protein EUBSIR_00365 [Eubacterium siraeum DSM 15702]
 gi|167657583|gb|EDS01713.1| hypothetical protein EUBSIR_00365 [Eubacterium siraeum DSM 15702]
 gi|291532117|emb|CBK97702.1| SSU ribosomal protein S4P [Eubacterium siraeum 70/3]
 gi|291558143|emb|CBL35260.1| SSU ribosomal protein S4P [Eubacterium siraeum V10Sc8a]
          Length = 198

 Score = 36.3 bits (83), Expect = 8.7,   Method: Composition-based stats.
 Identities = 9/39 (23%), Positives = 16/39 (41%)

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
           G A +  EAR+ +      +N   +     +IK  D  +
Sbjct: 98  GMAITRREARQLVTHGHFTVNGKKVDVPSYRIKPGDVVA 136


>gi|146298136|ref|YP_001192727.1| 30S ribosomal protein S4 [Flavobacterium johnsoniae UW101]
 gi|189045380|sp|A5FN16|RS4_FLAJO RecName: Full=30S ribosomal protein S4
 gi|146152554|gb|ABQ03408.1| 30S ribosomal protein S4 [Flavobacterium johnsoniae UW101]
          Length = 201

 Score = 36.3 bits (83), Expect = 8.7,   Method: Composition-based stats.
 Identities = 11/76 (14%), Positives = 28/76 (36%), Gaps = 3/76 (3%)

Query: 320 ATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKI 379
                  F+ +  ++ + T  +        +    ++ + G A S   AR+ +    I +
Sbjct: 66  EKQFRNLFEKASATKGV-TGEVLLQLCEARLD--NVVFRMGIAPSRRGARQIVSHRHITV 122

Query: 380 NNSIISNEKLQIKLQD 395
           N  +++     +K  D
Sbjct: 123 NGEVVNIPSYHLKPGD 138


>gi|325115456|emb|CBZ51011.1| tryptophanyl-tRNAsynthetase,related [Neospora caninum Liverpool]
          Length = 607

 Score = 36.3 bits (83), Expect = 8.8,   Method: Composition-based stats.
 Identities = 11/36 (30%), Positives = 17/36 (47%)

Query: 38  AYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
            Y G   ++ +LH GHL   M   +LQ     P+ +
Sbjct: 294 LYTGRGPSSEALHIGHLVPFMFTKYLQDVFDVPLVI 329


>gi|313206370|ref|YP_004045547.1| SSU ribosomal protein s4p [Riemerella anatipestifer DSM 15868]
 gi|312445686|gb|ADQ82041.1| SSU ribosomal protein S4P [Riemerella anatipestifer DSM 15868]
 gi|315023689|gb|EFT36693.1| 30S ribosomal protein S4 [Riemerella anatipestifer RA-YM]
 gi|325336184|gb|ADZ12458.1| Ribosomal protein S4 related protein [Riemerella anatipestifer
           RA-GD]
          Length = 202

 Score = 36.3 bits (83), Expect = 8.8,   Method: Composition-based stats.
 Identities = 20/118 (16%), Positives = 41/118 (34%), Gaps = 15/118 (12%)

Query: 285 DRMAKLQGKEINE-AKK-----IIATEITTMV-HGREEAEKAATAAMECFDMSIHSQHMP 337
           ++     G      AKK      +A +      +G  E           F  +  S+ + 
Sbjct: 31  NQPPGQHGPNKRRGAKKSEYAVQLAEKQKAKYTYGILE-----RQFSNLFKKAHASKGVT 85

Query: 338 TISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
              + +   SR   ++    + GFA +   AR+ +    I +N  +++     +K  D
Sbjct: 86  GEVLLQLCESRLDNVVY---RLGFAKTRAAARQLVSHRHITVNGEVVNIPSYSLKPGD 140


>gi|300869762|ref|YP_003784633.1| hemolysin A [Brachyspira pilosicoli 95/1000]
 gi|300687461|gb|ADK30132.1| hemolysin A [Brachyspira pilosicoli 95/1000]
          Length = 240

 Score = 36.3 bits (83), Expect = 8.8,   Method: Composition-based stats.
 Identities = 9/53 (16%), Positives = 23/53 (43%), Gaps = 3/53 (5%)

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD---FDSTGNIKLSFGKK 409
           G+  S ++A+  + +  + +N   ++++  +IK  D              G+K
Sbjct: 11  GYTESRSKAQDIILAGCVFVNGVKVTSKAQKIKDTDKIEVIQNRKYVSRAGEK 63


>gi|270263640|ref|ZP_06191909.1| putative RNA-binding protein [Serratia odorifera 4Rx13]
 gi|270042524|gb|EFA15619.1| putative RNA-binding protein [Serratia odorifera 4Rx13]
          Length = 70

 Score = 36.3 bits (83), Expect = 8.8,   Method: Composition-based stats.
 Identities = 9/56 (16%), Positives = 23/56 (41%), Gaps = 2/56 (3%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD--STGNIKLS 405
           L  L+   G+  S   A+  +    +K+N  + + ++ +I        + G + + 
Sbjct: 14  LCDLLKFQGWCESGGAAKEVIAEGLVKVNGKVETRKRCKIVADQVVEFNGGQVVVK 69


>gi|315499622|ref|YP_004088425.1| lysyl-tRNA synthetase [Asticcacaulis excentricus CB 48]
 gi|315417634|gb|ADU14274.1| lysyl-tRNA synthetase [Asticcacaulis excentricus CB 48]
          Length = 555

 Score = 36.3 bits (83), Expect = 8.8,   Method: Composition-based stats.
 Identities = 13/84 (15%), Positives = 24/84 (28%), Gaps = 6/84 (7%)

Query: 182 YDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTL 241
            D+           +M G D   ++     + + L           L     G K+ K+ 
Sbjct: 265 PDWAMRWAALGVDYEMAGKDLIDSVKVSSQVCKVLGGTPPEGFNYELFLDEQGQKISKSK 324

Query: 242 SGAI----WL--NKEMTSPYNFWQ 259
              +    WL      +  Y  +Q
Sbjct: 325 GNGLTMEDWLRYGAPESLAYYMFQ 348


>gi|148381274|ref|YP_001255815.1| tryptophanyl-tRNA synthetase [Clostridium botulinum A str. ATCC
           3502]
 gi|153933310|ref|YP_001385650.1| tryptophanyl-tRNA synthetase [Clostridium botulinum A str. ATCC
           19397]
 gi|153935971|ref|YP_001389056.1| tryptophanyl-tRNA synthetase [Clostridium botulinum A str. Hall]
 gi|148290758|emb|CAL84889.1| tryptophanyl-tRNA synthetase [Clostridium botulinum A str. ATCC
           3502]
 gi|152929354|gb|ABS34854.1| tryptophanyl-tRNA synthetase [Clostridium botulinum A str. ATCC
           19397]
 gi|152931885|gb|ABS37384.1| tryptophan--tRNA ligase [Clostridium botulinum A str. Hall]
 gi|322807639|emb|CBZ05214.1| tryptophanyl-tRNA synthetase [Clostridium botulinum H04402 065]
          Length = 332

 Score = 36.3 bits (83), Expect = 8.8,   Method: Composition-based stats.
 Identities = 29/137 (21%), Positives = 48/137 (35%), Gaps = 25/137 (18%)

Query: 152 RMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGID 211
           RM  ++    R    +S+S     Y +L A D +     Y+  L   G DQ  ++    D
Sbjct: 108 RMTQYKDKSQRY--GESVSAGLLTYPVLMAADILL----YNTDLVPVGKDQKQHLEITRD 161

Query: 212 LGERLKT--PKLFALTSPLLTTASG---------TKMGKTLSG---AIWLNKEMTSPYNF 257
           L +R        F +  P +  A            KM K+       I +   M  P   
Sbjct: 162 LAQRFNNLYSPTFKMPDPYIPEAGAKIMDLQDPTKKMSKSSDNENSYILI---MDPPDAI 218

Query: 258 WQYW-RNIDDAD-VVSF 272
            +   R + D+  +V +
Sbjct: 219 RRKINRCVTDSLGIVKY 235


>gi|110005205|emb|CAK99531.1| tryptophanyl-trna synthetase protein [Spiroplasma citri]
          Length = 340

 Score = 36.3 bits (83), Expect = 8.8,   Method: Composition-based stats.
 Identities = 47/254 (18%), Positives = 82/254 (32%), Gaps = 34/254 (13%)

Query: 31  CSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDES 90
             Q   T   G   T   L  G+    +  F   +  +  I  +    + I  P  ++E 
Sbjct: 1   MEQKKTTIVSGITATGQ-LTLGNYIGAIKNFIELQEDNNLIIFVANLHA-ITIPISKEEL 58

Query: 91  RRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSV 150
           R              IK + + +   G     A++      L       +L    +   +
Sbjct: 59  RN------------NIKNMIALYYASGLDPQKAIIFVQSDVLEVTLLAHILLCNTTIGEL 106

Query: 151 NRMLSFESVRSRLKREQSLSFLE---FNYMILQAYDFVELAKNYDCRLQMGGSDQWGNII 207
           +RM  F+   S++K E    F+      Y  L A D +     YD  L   G DQ  +I 
Sbjct: 107 SRMTQFKDKSSKMKAENGTEFIPTGLLTYPTLMAADILL----YDADLVPVGKDQKQHIE 162

Query: 208 CGIDLGERLKTPKLFALTSP---LLTTASGT---------KMGKTLSGAIWLNKEMTSPY 255
              ++ ER+       L       +    G          KM K+ +        + SP 
Sbjct: 163 LTRNIAERMNNRYQQNLFKIPTDFIPPIGGKIMDLQNPTKKMSKSSNDPKSFISLLDSPE 222

Query: 256 NFWQYWRN-IDDAD 268
              +  R+ + D++
Sbjct: 223 LIQKKIRSAVTDSE 236


>gi|332830420|gb|EGK03048.1| hypothetical protein HMPREF9455_01298 [Dysgonomonas gadei ATCC
           BAA-286]
          Length = 444

 Score = 36.3 bits (83), Expect = 8.8,   Method: Composition-based stats.
 Identities = 10/52 (19%), Positives = 22/52 (42%), Gaps = 1/52 (1%)

Query: 345 EVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF 396
           + +  + L   +  AG   S  EA  ++ S  +K+N  ++     ++   D 
Sbjct: 204 DPNTPLRLNKYLANAGVC-SRREADAYITSGVVKVNGEVVDQLGAKVTRGDL 254


>gi|317485797|ref|ZP_07944661.1| ribosomal protein S4 [Bilophila wadsworthia 3_1_6]
 gi|316922903|gb|EFV44125.1| ribosomal protein S4 [Bilophila wadsworthia 3_1_6]
          Length = 208

 Score = 36.3 bits (83), Expect = 8.8,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 23/42 (54%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
            ++ + GFA S  +AR+ ++     +N   ++   LQ+K+ D
Sbjct: 102 NVVYRLGFANSRTQARQLVRHGVFTLNGHKVTIPSLQVKVGD 143


>gi|294084708|ref|YP_003551466.1| pseudouridine synthase [Candidatus Puniceispirillum marinum
           IMCC1322]
 gi|292664281|gb|ADE39382.1| Pseudouridine synthase, Rsu [Candidatus Puniceispirillum marinum
           IMCC1322]
          Length = 312

 Score = 36.3 bits (83), Expect = 8.8,   Method: Composition-based stats.
 Identities = 13/59 (22%), Positives = 26/59 (44%), Gaps = 1/59 (1%)

Query: 340 SISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
           + + D+ S    +   I +AG   S  EA   +    +K+N  +I++  L +   D  +
Sbjct: 6   TFTLDKKSDSERIAKRIARAGVC-SRREAEARINEGRVKVNGKVITSPVLNVSDTDRIN 63


>gi|292670719|ref|ZP_06604145.1| hemolysin A [Selenomonas noxia ATCC 43541]
 gi|292647665|gb|EFF65637.1| hemolysin A [Selenomonas noxia ATCC 43541]
          Length = 269

 Score = 36.3 bits (83), Expect = 8.8,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 26/63 (41%), Gaps = 10/63 (15%)

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL--------QDF--DSTGNIKL 404
           L+V  GFA S   A+R + +  + ++   +      +          +D    S G +KL
Sbjct: 9   LLVARGFAASRERAKRLIMAGQVLVDEQRVDKAGTTVSPLSSLRVVGEDLPYVSRGGLKL 68

Query: 405 SFG 407
           + G
Sbjct: 69  AKG 71


>gi|237737269|ref|ZP_04567750.1| ribosomal small subunit pseudouridine synthase A [Fusobacterium
           mortiferum ATCC 9817]
 gi|229421131|gb|EEO36178.1| ribosomal small subunit pseudouridine synthase A [Fusobacterium
           mortiferum ATCC 9817]
          Length = 230

 Score = 36.3 bits (83), Expect = 8.8,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 22/48 (45%), Gaps = 1/48 (2%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
              M L   + + G   S  E ++ L +  I++N+ I+ N +  IK  
Sbjct: 2   EDKMRLDKFLTECGL-GSRREVKKLLDNGKIRVNDIIVKNPQANIKES 48


>gi|163867328|ref|YP_001608522.1| lysyl-tRNA synthetase [Bartonella tribocorum CIP 105476]
 gi|161016969|emb|CAK00527.1| lysyl-tRNA synthetase [Bartonella tribocorum CIP 105476]
          Length = 552

 Score = 36.3 bits (83), Expect = 8.8,   Method: Composition-based stats.
 Identities = 12/82 (14%), Positives = 22/82 (26%), Gaps = 4/82 (4%)

Query: 183 DFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLS 242
           D+           +M G D   +      + + L           L     G K+ K+  
Sbjct: 250 DWAMRWTALGIDYEMAGKDLIDSTNLSSKICKVLGGKPPEGFNYELFLDDKGQKISKSKG 309

Query: 243 GAI----WLNKEMTSPYNFWQY 260
             +    WL    T     + +
Sbjct: 310 NGLTIDEWLTYAPTESLGLYMF 331


>gi|152112239|sp|Q04E66|RS4_OENOB RecName: Full=30S ribosomal protein S4
          Length = 204

 Score = 36.3 bits (83), Expect = 8.8,   Method: Composition-based stats.
 Identities = 7/44 (15%), Positives = 19/44 (43%)

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
           + G A++  +AR+ +    I ++   ++    ++K     S   
Sbjct: 102 RLGLASTRPQARQLVNHGHILVDGKRVTIPSYEVKPGQIISVRE 145


>gi|160878165|ref|YP_001557133.1| RNA-binding S4 domain-containing protein [Clostridium
           phytofermentans ISDg]
 gi|160426831|gb|ABX40394.1| RNA-binding S4 domain protein [Clostridium phytofermentans ISDg]
          Length = 71

 Score = 36.3 bits (83), Expect = 8.8,   Method: Composition-based stats.
 Identities = 11/60 (18%), Positives = 20/60 (33%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
              + L   +  AG   S  EA+  +    +K+N  +      +I   D     N  +  
Sbjct: 8   EEFIKLGQALKAAGLVDSGVEAKDVITEGLVKVNGVVEYQRGKKIHGGDSIEFNNEIVQI 67


>gi|154174771|ref|YP_001407361.1| RNA-uridine isomerase [Campylobacter curvus 525.92]
 gi|112802450|gb|EAT99794.1| RNA-uridine isomerase [Campylobacter curvus 525.92]
          Length = 257

 Score = 36.3 bits (83), Expect = 8.9,   Method: Composition-based stats.
 Identities = 13/51 (25%), Positives = 22/51 (43%), Gaps = 1/51 (1%)

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSFGKKNHIIC 414
           S  EA   +KS  I +NN ++S     +  +D    G   +   KK+  + 
Sbjct: 17  SRREADELIKSGKISVNNKLVSELATSVSDEDKVKIGGRLVKP-KKDFTMI 66


>gi|153940960|ref|YP_001392677.1| tryptophanyl-tRNA synthetase [Clostridium botulinum F str.
           Langeland]
 gi|170754479|ref|YP_001782955.1| tryptophanyl-tRNA synthetase [Clostridium botulinum B1 str. Okra]
 gi|152936856|gb|ABS42354.1| tryptophan--tRNA ligase [Clostridium botulinum F str. Langeland]
 gi|169119691|gb|ACA43527.1| tryptophanyl-tRNA synthetase [Clostridium botulinum B1 str. Okra]
 gi|295320660|gb|ADG01038.1| tryptophan--tRNA ligase [Clostridium botulinum F str. 230613]
          Length = 332

 Score = 36.3 bits (83), Expect = 8.9,   Method: Composition-based stats.
 Identities = 29/137 (21%), Positives = 48/137 (35%), Gaps = 25/137 (18%)

Query: 152 RMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGID 211
           RM  ++    R    +S+S     Y +L A D +     Y+  L   G DQ  ++    D
Sbjct: 108 RMTQYKDKSQRY--GESVSAGLLTYPVLMAADILL----YNTDLVPVGKDQKQHLEITRD 161

Query: 212 LGERLKT--PKLFALTSPLLTTASG---------TKMGKTLSG---AIWLNKEMTSPYNF 257
           L +R        F +  P +  A            KM K+       I +   M  P   
Sbjct: 162 LAQRFNNLYSPTFKMPDPYIPEAGAKIMDLQDPTKKMSKSSDNENSYILI---MDPPDAI 218

Query: 258 WQYW-RNIDDAD-VVSF 272
            +   R + D+  +V +
Sbjct: 219 RRKINRCVTDSLGIVKY 235


>gi|118595311|ref|ZP_01552658.1| 30S ribosomal protein S4 [Methylophilales bacterium HTCC2181]
 gi|118441089|gb|EAV47716.1| 30S ribosomal protein S4 [Methylophilales bacterium HTCC2181]
          Length = 209

 Score = 36.3 bits (83), Expect = 8.9,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 24/55 (43%), Gaps = 8/55 (14%)

Query: 349 GMGLLTLI--------VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           G  LL L+         K G   S  E+R+ +K NAI +N   ++    Q+   D
Sbjct: 90  GENLLQLLESRLDNVVYKMGLGASRTESRQIVKHNAILVNGKRVNIPSFQVSPGD 144


>gi|115433390|ref|XP_001216832.1| tryptophanyl-tRNA synthetase [Aspergillus terreus NIH2624]
 gi|114189684|gb|EAU31384.1| tryptophanyl-tRNA synthetase [Aspergillus terreus NIH2624]
          Length = 428

 Score = 36.3 bits (83), Expect = 8.9,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 22/55 (40%), Gaps = 7/55 (12%)

Query: 15  RGFIHQISNPRELDILCSQ----GVVTAYIGYDLTASSLHAGHLTQLMLLFWLQK 65
           RG +    + REL+ +  +         Y G   ++ ++H GH        WLQ 
Sbjct: 85  RGIVF---SHRELNKILDRYEKGQPFYLYTGRGPSSDAVHLGHTVPFEFTKWLQD 136


>gi|319795938|ref|YP_004157578.1| ribosomal RNA methyltransferase rrmj/ftsj [Variovorax paradoxus
           EPS]
 gi|315598401|gb|ADU39467.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Variovorax paradoxus
           EPS]
          Length = 278

 Score = 36.3 bits (83), Expect = 9.0,   Method: Composition-based stats.
 Identities = 7/22 (31%), Positives = 12/22 (54%)

Query: 354 TLIVKAGFATSTNEARRHLKSN 375
            L+V+ G A S ++A R +   
Sbjct: 5   QLLVERGLAASRSQAVRLIAGG 26


>gi|260914657|ref|ZP_05921123.1| 30S ribosomal protein S4 [Pasteurella dagmatis ATCC 43325]
 gi|260631256|gb|EEX49441.1| 30S ribosomal protein S4 [Pasteurella dagmatis ATCC 43325]
          Length = 206

 Score = 36.3 bits (83), Expect = 9.0,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 22/42 (52%)

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
           GFA + +EAR+ +   AI +N  +++    Q+ + D  +   
Sbjct: 106 GFAATRSEARQLVSHKAIVVNGRVVNIPSFQVSVNDVVAVRE 147


>gi|260437691|ref|ZP_05791507.1| conserved domain protein [Butyrivibrio crossotus DSM 2876]
 gi|292809917|gb|EFF69122.1| conserved domain protein [Butyrivibrio crossotus DSM 2876]
          Length = 69

 Score = 36.3 bits (83), Expect = 9.0,   Method: Composition-based stats.
 Identities = 9/52 (17%), Positives = 19/52 (36%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDS 398
              + L   +  A   +S  EA+  +    +K+N         +++  D  S
Sbjct: 8   EEFIKLGQALKAANLVSSGVEAKDVILEGMVKVNGEKEYQRGKKLRAGDIVS 59


>gi|258654177|ref|YP_003203333.1| pseudouridine synthase [Nakamurella multipartita DSM 44233]
 gi|258557402|gb|ACV80344.1| pseudouridine synthase [Nakamurella multipartita DSM 44233]
          Length = 249

 Score = 36.3 bits (83), Expect = 9.0,   Method: Composition-based stats.
 Identities = 8/53 (15%), Positives = 23/53 (43%), Gaps = 1/53 (1%)

Query: 343 KDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
            +    G+ L  ++  AG   S  +A   ++   +K++  ++     +I  ++
Sbjct: 5   SEAADDGVRLQKVLASAG-VASRRKAEELIRDGRVKVDGIVVREMGTRIDPEN 56


>gi|228906915|ref|ZP_04070782.1| Tryptophanyl-tRNA synthetase [Bacillus thuringiensis IBL 200]
 gi|228852663|gb|EEM97450.1| Tryptophanyl-tRNA synthetase [Bacillus thuringiensis IBL 200]
          Length = 329

 Score = 36.3 bits (83), Expect = 9.0,   Method: Composition-based stats.
 Identities = 41/302 (13%), Positives = 90/302 (29%), Gaps = 60/302 (19%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   + + +  G+    M  F   +  H     +    + I  P    + R+ +RS    
Sbjct: 7   GIQPSGT-ITLGNYLGAMKQFTELQNEHDCYFCIVNQHA-ITVPQDPVQLRKNIRSLAAL 64

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLS-FESV 159
                I    ++          A +     W        +++ +     + RM    +  
Sbjct: 65  YVACGIDPEKATLFVQSEVPAHAQL----GW--------IMQSVAYVGELERMTQYKDKA 112

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-- 217
             R      L      Y  L A D +     Y+  +   G DQ  ++    DL ER    
Sbjct: 113 SGRDSVPAGL----LTYPPLMAADILL----YNTEIVPVGDDQKQHMELTRDLAERFNKR 164

Query: 218 ---------------TPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWR 262
                            ++ +LT P        KM K+      +   +  P    +  +
Sbjct: 165 FREVFTIPEIRIPKVGARVMSLTEPT------KKMSKSDPNPKSMISMLDEPKTIEKKIK 218

Query: 263 N-IDDAD------------VVSFAKRLTTLPMSEIDRMAKL-QGKEINEAKKIIATEITT 308
           + + D++            + +     ++     ++ +  + +GK   + K  +A  +  
Sbjct: 219 SAVTDSEGIVKFDKENKPGISNLLTIYSSFSRKTVEEIEAMYEGKGYGDFKGDLAQVVVE 278

Query: 309 MV 310
            +
Sbjct: 279 AI 280


>gi|225870034|ref|YP_002745981.1| hypothetical protein SEQ_0625 [Streptococcus equi subsp. equi 4047]
 gi|225699438|emb|CAW92932.1| conserved hypothetical protein [Streptococcus equi subsp. equi
           4047]
          Length = 264

 Score = 36.3 bits (83), Expect = 9.0,   Method: Composition-based stats.
 Identities = 8/50 (16%), Positives = 22/50 (44%)

Query: 353 LTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNI 402
           +  ++      S N+A R +++  +K+N  +++     + + D  S    
Sbjct: 188 VDRLIATVLKQSRNQAIRLVEAGKVKVNYQLVTKASQPVAVGDLISIRGY 237


>gi|237837957|ref|XP_002368276.1| tryptophanyl-tRNA synthetase, putative [Toxoplasma gondii ME49]
 gi|211965940|gb|EEB01136.1| tryptophanyl-tRNA synthetase, putative [Toxoplasma gondii ME49]
          Length = 606

 Score = 36.3 bits (83), Expect = 9.0,   Method: Composition-based stats.
 Identities = 11/36 (30%), Positives = 17/36 (47%)

Query: 38  AYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
            Y G   ++ +LH GHL   M   +LQ     P+ +
Sbjct: 293 LYTGRGPSSEALHIGHLVPFMFTKYLQDVFDVPLVI 328


>gi|209558865|ref|YP_002285337.1| Putative ribosomal large subunit pseudouridine synthase
           [Streptococcus pyogenes NZ131]
 gi|209540066|gb|ACI60642.1| Putative ribosomal large subunit pseudouridine synthase
           [Streptococcus pyogenes NZ131]
          Length = 240

 Score = 36.3 bits (83), Expect = 9.0,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 18/40 (45%), Gaps = 1/40 (2%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           I  AG A S  +A   +K   + +N  +I +    +K  D
Sbjct: 7   IAHAGIA-SRRKAEELIKQGLVTLNGQVIMDLATTVKSGD 45


>gi|150399654|ref|YP_001323421.1| tryptophanyl-tRNA synthetase [Methanococcus vannielii SB]
 gi|150012357|gb|ABR54809.1| tryptophanyl-tRNA synthetase [Methanococcus vannielii SB]
          Length = 358

 Score = 36.3 bits (83), Expect = 9.0,   Method: Composition-based stats.
 Identities = 45/259 (17%), Positives = 84/259 (32%), Gaps = 37/259 (14%)

Query: 15  RGFIHQISNPRELDILCSQGV-VTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKPISL 73
           RG +    + + +    + G   T   G   +   +H GH   +  L + QK G      
Sbjct: 41  RGIVFGHRDFQRILDAINNGKDFTVVSGMMPSGK-MHFGHKMVVDQLLYYQKLGADIYIP 99

Query: 74  MGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLC 133
           +    +        + +R++   + I   I          +     K +  + +      
Sbjct: 100 IADLEAYWARGMAFEATRKIAIEEYITNYIA---------LGLDPEKINVYLQS-----K 145

Query: 134 SIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVE--LAKNY 191
           + K  DL   +    + + M            E ++    F   I+Q  D +   L K  
Sbjct: 146 NEKVKDLAMFLSKKVNFSEM--KGIYG--FSGETNIG-HVFA-PIVQVADILHPQLEKKV 199

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSP------LLTTASGTKMGKTLSG-A 244
              + +G  DQ  +I    D+  R K    F    P       +T   G KM  +    A
Sbjct: 200 PVLVPVG-IDQDPHIRLTRDISGRYKD---FGFIPPSSTYHRFITGLLGGKMSSSKPETA 255

Query: 245 IWLNKEMTSPYNFWQYWRN 263
           I+L+ E     +F +   +
Sbjct: 256 IYLSDEPNK--SFKKKIMS 272


>gi|322807729|emb|CBZ05304.1| SSU ribosomal protein S4p (S9e) [Clostridium botulinum H04402 065]
          Length = 197

 Score = 36.3 bits (83), Expect = 9.1,   Method: Composition-based stats.
 Identities = 11/38 (28%), Positives = 20/38 (52%)

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
           GFA S  +AR+ +    I +N+S ++    ++K  D  
Sbjct: 98  GFANSIRQARQMVNHGHILVNDSKVNIPSYEVKAGDVI 135


>gi|289668224|ref|ZP_06489299.1| hypothetical protein XcampmN_06935 [Xanthomonas campestris pv.
           musacearum NCPPB4381]
          Length = 80

 Score = 36.3 bits (83), Expect = 9.1,   Method: Composition-based stats.
 Identities = 10/66 (15%), Positives = 26/66 (39%)

Query: 341 ISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG 400
           +  D     + L  L+  AG A S  + +  + S A+ ++      +  +I+        
Sbjct: 4   LEFDLDGDYIELNQLLKLAGIADSGGQGKAIVASGAVSVDGVQELRKTAKIRPGQLVQLD 63

Query: 401 NIKLSF 406
           ++++  
Sbjct: 64  DVEIRV 69


>gi|323526902|ref|YP_004229055.1| RNA-binding S4 domain-containing protein [Burkholderia sp.
           CCGE1001]
 gi|323383904|gb|ADX55995.1| RNA-binding S4 domain protein [Burkholderia sp. CCGE1001]
          Length = 72

 Score = 36.3 bits (83), Expect = 9.1,   Method: Composition-based stats.
 Identities = 9/55 (16%), Positives = 25/55 (45%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
           L  L+   G A S  +A+  +   A+ ++  + + +  +I+       G+ +++ 
Sbjct: 15  LHNLLKITGLAESGGQAKMMVADGAVTVDGRVETRKTCKIRAGQVVLLGDTRIAV 69


>gi|270291002|ref|ZP_06197225.1| 30S ribosomal protein S4 [Pediococcus acidilactici 7_4]
 gi|304385274|ref|ZP_07367619.1| 30S ribosomal protein S4 [Pediococcus acidilactici DSM 20284]
 gi|270280398|gb|EFA26233.1| 30S ribosomal protein S4 [Pediococcus acidilactici 7_4]
 gi|304328481|gb|EFL95702.1| 30S ribosomal protein S4 [Pediococcus acidilactici DSM 20284]
          Length = 202

 Score = 36.3 bits (83), Expect = 9.1,   Method: Composition-based stats.
 Identities = 6/44 (13%), Positives = 18/44 (40%)

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
           + G AT+  +AR+ +    I ++   +     ++++        
Sbjct: 101 RLGLATTRRQARQLVNHGHITVDGKRVDIPSYEVEIGQVIGVRE 144


>gi|257417204|ref|ZP_05594198.1| 30S ribosomal protein S4 [Enterococcus faecalis AR01/DG]
 gi|257159032|gb|EEU88992.1| 30S ribosomal protein S4 [Enterococcus faecalis ARO1/DG]
          Length = 203

 Score = 36.3 bits (83), Expect = 9.1,   Method: Composition-based stats.
 Identities = 6/48 (12%), Positives = 19/48 (39%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
            ++ + G AT+  +AR+ +    I ++   +      +++        
Sbjct: 97  NVVYRLGLATTRRQARQLVNHGHITVDGKRVDIPSYHVEVGQVIGVRE 144


>gi|256420685|ref|YP_003121338.1| ribosomal protein S4 [Chitinophaga pinensis DSM 2588]
 gi|256035593|gb|ACU59137.1| ribosomal protein S4 [Chitinophaga pinensis DSM 2588]
          Length = 201

 Score = 36.3 bits (83), Expect = 9.1,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 19/47 (40%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG 400
             + + G A S   AR+ +    I +N  +++    Q+K  D     
Sbjct: 97  NAVFRLGIAPSRPAARQLVSHKHITVNGQVMNVPSYQLKPGDIIGLK 143


>gi|239817643|ref|YP_002946553.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Variovorax paradoxus
           S110]
 gi|239804220|gb|ACS21287.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Variovorax paradoxus
           S110]
          Length = 263

 Score = 36.3 bits (83), Expect = 9.1,   Method: Composition-based stats.
 Identities = 7/22 (31%), Positives = 12/22 (54%)

Query: 354 TLIVKAGFATSTNEARRHLKSN 375
            L+V+ G A S ++A R +   
Sbjct: 5   QLLVERGLAASRSQAVRLIAGG 26


>gi|169334432|ref|ZP_02861625.1| hypothetical protein ANASTE_00832 [Anaerofustis stercorihominis DSM
           17244]
 gi|169259149|gb|EDS73115.1| hypothetical protein ANASTE_00832 [Anaerofustis stercorihominis DSM
           17244]
          Length = 267

 Score = 36.3 bits (83), Expect = 9.1,   Method: Composition-based stats.
 Identities = 7/39 (17%), Positives = 21/39 (53%)

Query: 355 LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKL 393
           L+ ++G A S  +A+R + +  + +N+  +     ++ +
Sbjct: 10  LLFESGMAESREKAKRLIMAGVVFVNDQRVDKAGTKVDI 48


>gi|78779356|ref|YP_397468.1| RNA-binding S4 [Prochlorococcus marinus str. MIT 9312]
 gi|78712855|gb|ABB50032.1| RNA-binding S4 [Prochlorococcus marinus str. MIT 9312]
          Length = 58

 Score = 36.3 bits (83), Expect = 9.1,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 21/46 (45%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           M L   +      +S  EA+  +KS ++K+N  I +    ++   D
Sbjct: 1   MKLDQFLKWKNLVSSGGEAKTFIKSGSVKVNGVIETRRGRKLNKGD 46


>gi|323706478|ref|ZP_08118039.1| ribosomal protein S4 [Thermoanaerobacterium xylanolyticum LX-11]
 gi|323534198|gb|EGB23988.1| ribosomal protein S4 [Thermoanaerobacterium xylanolyticum LX-11]
          Length = 206

 Score = 36.3 bits (83), Expect = 9.1,   Method: Composition-based stats.
 Identities = 13/60 (21%), Positives = 22/60 (36%), Gaps = 8/60 (13%)

Query: 349 GMGLLTLI--------VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG 400
           G  LL L+         +   A+S  +AR+ +    I +N   +      +K  D  S  
Sbjct: 89  GDNLLQLLERRLDNVVYRLSIASSRAQARQFVSHGHILVNGKKVDIPSYLVKAGDVVSVK 148


>gi|322392437|ref|ZP_08065897.1| tryptophan--tRNA ligase [Streptococcus peroris ATCC 700780]
 gi|321144429|gb|EFX39830.1| tryptophan--tRNA ligase [Streptococcus peroris ATCC 700780]
          Length = 341

 Score = 36.3 bits (83), Expect = 9.1,   Method: Composition-based stats.
 Identities = 41/244 (16%), Positives = 68/244 (27%), Gaps = 42/244 (17%)

Query: 44  LTASSLHAGHLTQLMLLFWLQK--TGHKPISLMGG---GTSIIGDPSFRDESRRMMRSQE 98
            T   LH GH    +    L +    +     +      T    DP              
Sbjct: 12  PTGK-LHIGHYVGSLKNRVLLQEENKYDMFIFLADQQALTDHAKDPQ------------T 58

Query: 99  IQENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFES 158
           I E+I  +  +    +     K+   + +    L  +    +     +    N  +  E 
Sbjct: 59  IVESIGNV-ALDYLAVGLDPNKSTIFIQSQIPELAELSMYYMNLVSLARLERNPTVKTEI 117

Query: 159 VRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLKT 218
            +          FL   Y I QA D      N    L   G+DQ   I    ++      
Sbjct: 118 AQKGFGESIPTGFL--VYPISQAADITAFKAN----LVPVGNDQKPMIEQTREIVRSFNH 171

Query: 219 P-KLFALTSP-----------LLTTASGT-KMGKTLSGAIWLNKEMTSPYNFWQYWRNI- 264
                 L  P            L    G  KM K+L+  I+L  +  +     +   ++ 
Sbjct: 172 AYNCEVLVEPEGIYPEHEGAGRLPGLDGNAKMSKSLNNGIYLADDADT---LRKKVMSMY 228

Query: 265 DDAD 268
            D D
Sbjct: 229 TDPD 232


>gi|310778916|ref|YP_003967249.1| RNA-binding S4 domain protein [Ilyobacter polytropus DSM 2926]
 gi|309748239|gb|ADO82901.1| RNA-binding S4 domain protein [Ilyobacter polytropus DSM 2926]
          Length = 258

 Score = 36.3 bits (83), Expect = 9.1,   Method: Composition-based stats.
 Identities = 16/86 (18%), Positives = 30/86 (34%), Gaps = 6/86 (6%)

Query: 333 SQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIK 392
            +++P +   +         L  IV A    S ++A   ++   + +N S+   +   IK
Sbjct: 164 EKNIPEMEFEEITYLVSSLRLDSIVAAITEKSRSQATELIREGTVSLNYSVRREKDASIK 223

Query: 393 LQDFDSTGNIKLSFGKKNHIICHLCG 418
             D           GK   I   + G
Sbjct: 224 DGDII----TVRRKGK--FIFEKVTG 243


>gi|239617854|ref|YP_002941176.1| pseudouridine synthase [Kosmotoga olearia TBF 19.5.1]
 gi|239506685|gb|ACR80172.1| pseudouridine synthase [Kosmotoga olearia TBF 19.5.1]
          Length = 235

 Score = 36.3 bits (83), Expect = 9.1,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 20/42 (47%), Gaps = 2/42 (4%)

Query: 364 STNEARRHLKSNAIKINNSIISNEKLQIKLQD--FDSTGNIK 403
           S  ++R+ +K+  +++N + I N + +I      F     I 
Sbjct: 14  SRRQSRKLIKTGRVEVNGAKIRNPEFKIPENSSIFLDGNRIV 55


>gi|162451363|ref|YP_001613730.1| 30S ribosomal protein S4 [Sorangium cellulosum 'So ce 56']
 gi|161161945|emb|CAN93250.1| 30S ribosomal protein S4 [Sorangium cellulosum 'So ce 56']
          Length = 203

 Score = 36.3 bits (83), Expect = 9.1,   Method: Composition-based stats.
 Identities = 11/61 (18%), Positives = 27/61 (44%), Gaps = 8/61 (13%)

Query: 343 KDEVSRGMGLLTLI--------VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
           + +++ G  L+ L+         +AGFA +   AR+ +    + IN   +     ++ + 
Sbjct: 77  RSDLAAGTKLIELLERRLDNVIFRAGFARTIPAARQLVAHGHVLINGKRVDIPSYRVTIG 136

Query: 395 D 395
           +
Sbjct: 137 E 137


>gi|124486066|ref|YP_001030682.1| 30S ribosomal protein S4P [Methanocorpusculum labreanum Z]
 gi|152112228|sp|A2SSV9|RS4_METLZ RecName: Full=30S ribosomal protein S4P
 gi|124363607|gb|ABN07415.1| SSU ribosomal protein S4P [Methanocorpusculum labreanum Z]
          Length = 181

 Score = 36.3 bits (83), Expect = 9.1,   Method: Composition-based stats.
 Identities = 9/36 (25%), Positives = 16/36 (44%)

Query: 360 GFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           G A S  +AR+ +    I IN   +S     + + +
Sbjct: 118 GLARSPKQARQLITHGHIAINGQRVSVPSYMVSIAE 153


>gi|325856044|ref|ZP_08171933.1| ribosomal protein S4 [Prevotella denticola CRIS 18C-A]
 gi|327313216|ref|YP_004328653.1| 30S ribosomal protein S4 [Prevotella denticola F0289]
 gi|325483716|gb|EGC86680.1| ribosomal protein S4 [Prevotella denticola CRIS 18C-A]
 gi|326946115|gb|AEA22000.1| ribosomal protein S4 [Prevotella denticola F0289]
          Length = 201

 Score = 36.3 bits (83), Expect = 9.2,   Method: Composition-based stats.
 Identities = 12/82 (14%), Positives = 29/82 (35%), Gaps = 3/82 (3%)

Query: 320 ATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKI 379
                  FD +  +  + T  +    +   +    ++ + G A +   AR+ +    I +
Sbjct: 65  ERQFRNLFDKAAKADGI-TGEVLLQSLESRLD--NVVFRLGIAPTRAAARQLVSHKHIVV 121

Query: 380 NNSIISNEKLQIKLQDFDSTGN 401
           N +++     Q+K  D      
Sbjct: 122 NGNVVGIASYQVKAGDVVGVRE 143


>gi|297519439|ref|ZP_06937825.1| valyl-tRNA synthetase [Escherichia coli OP50]
          Length = 279

 Score = 36.3 bits (83), Expect = 9.2,   Method: Composition-based stats.
 Identities = 7/44 (15%), Positives = 13/44 (29%), Gaps = 4/44 (9%)

Query: 206 IICGIDLGERLKTPKLF----ALTSPLLTTASGTKMGKTLSGAI 245
           I+  +   +               + L+    G KM K+    I
Sbjct: 133 IMMTMHFIKDENGKPQVPFHTVYMTGLIRDDEGQKMSKSKGNVI 176


>gi|328544921|ref|YP_004305030.1| ribosomal RNA large subunit methyltransferase J [polymorphum gilvum
           SL003B-26A1]
 gi|326414663|gb|ADZ71726.1| Ribosomal RNA large subunit methyltransferase J [Polymorphum gilvum
           SL003B-26A1]
          Length = 247

 Score = 36.3 bits (83), Expect = 9.3,   Method: Composition-based stats.
 Identities = 7/31 (22%), Positives = 15/31 (48%), Gaps = 1/31 (3%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISN 386
           +V+ G A S   AR  +    + ++   I++
Sbjct: 11  LVELGLAPSRARARDAILRGTVTVDG-RIAD 40


>gi|255721325|ref|XP_002545597.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
 gi|240136086|gb|EER35639.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
          Length = 461

 Score = 36.3 bits (83), Expect = 9.3,   Method: Composition-based stats.
 Identities = 23/128 (17%), Positives = 44/128 (34%), Gaps = 25/128 (19%)

Query: 299 KKIIATEITTMVHGREEAEKAATAAMECFDMSIHSQHMPTIS------ISKDEVSRGMGL 352
           +K  A   T   HG    EK        F   +  + + T S        +D     + L
Sbjct: 44  QKWAAKSETRKYHGEHLREK-------HFKNVLFDKDLKTYSQLDASLKGRDVAPTPITL 96

Query: 353 LT----------LIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDF--DSTG 400
            T           + ++ FA+S  +AR+ +    +K+N  ++      ++  D       
Sbjct: 97  QTFGTLEKRLEVALFRSMFASSLRQARQFILGGFVKVNGVVMKYPSFPLQSGDVFSVDPE 156

Query: 401 NIKLSFGK 408
            +  + GK
Sbjct: 157 KVLYALGK 164


>gi|124027820|ref|YP_001013140.1| tryptophanyl-tRNA synthetase [Hyperthermus butylicus DSM 5456]
 gi|166225534|sp|A2BLD4|SYW_HYPBU RecName: Full=Tryptophanyl-tRNA synthetase; AltName:
           Full=Tryptophan--tRNA ligase; Short=TrpRS
 gi|123978514|gb|ABM80795.1| Tryptophanyl-tRNA synthetase [Hyperthermus butylicus DSM 5456]
          Length = 373

 Score = 36.3 bits (83), Expect = 9.3,   Method: Composition-based stats.
 Identities = 41/252 (16%), Positives = 79/252 (31%), Gaps = 38/252 (15%)

Query: 12  LSERGFIHQISNPRE-LDILCSQGVVTAYIGYDLTASSLHAGHLTQLMLLFWLQKTGHKP 70
           L  RG I    +  + L+   S   +    G+  +    H GH      + + QK G + 
Sbjct: 46  LMRRGIIFGHRDYEKILEAYRSGERIALVTGFMPSGKF-HFGHKMVADQIIYYQKLGFEI 104

Query: 71  ISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGTGKTDALMLNNET 130
             ++    +           RR+ R + I+  + +      +        T      N  
Sbjct: 105 FVVIADAEAYA--------VRRLDRRKIIEIGLYEYVANLIALGLEKNKHTHIYFQTNYE 156

Query: 131 WLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKN 190
                 Y  L++      ++  M +   +   L+  + ++       + QA D +    +
Sbjct: 157 ----TPYYRLIQMFSRRVTLEEMSA---IYGDLEPSKIMA------ALTQAADILHPQLD 203

Query: 191 Y-----DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPL------LTTASGTKMGK 239
           Y        + +G  DQ  +I    D+  R +      L  P        T   G KM  
Sbjct: 204 YFGGFKYVVVPVGA-DQDPHIRLTRDIAARFENE--LGLRRPASTYHRFQTGLDGNKMSS 260

Query: 240 TLSGA-IWLNKE 250
           +     I+L   
Sbjct: 261 SRPEYTIFLTDP 272


>gi|15829187|ref|NP_326547.1| 30S ribosomal protein S4 [Mycoplasma pulmonis UAB CTIP]
 gi|26399464|sp|Q98PK6|RS4_MYCPU RecName: Full=30S ribosomal protein S4
 gi|14090131|emb|CAC13889.1| 30S RIBOSOMAL PROTEIN S4 [Mycoplasma pulmonis]
          Length = 199

 Score = 36.3 bits (83), Expect = 9.3,   Method: Composition-based stats.
 Identities = 9/53 (16%), Positives = 22/53 (41%), Gaps = 1/53 (1%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
            L+ +AGFA +  +AR+ +    + ++   +     ++ +         KL  
Sbjct: 98  NLVYRAGFAETRRQARQFVNHGHVLVDGKKVDIPSYRVAVGKVIEIKE-KLQK 149


>gi|157825866|ref|YP_001493586.1| ribosomal large subunit pseudouridine synthase [Rickettsia akari
           str. Hartford]
 gi|157799824|gb|ABV75078.1| Ribosomal large subunit pseudouridine synthase [Rickettsia akari
           str. Hartford]
          Length = 229

 Score = 36.3 bits (83), Expect = 9.3,   Method: Composition-based stats.
 Identities = 9/53 (16%), Positives = 21/53 (39%), Gaps = 1/53 (1%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKL 404
           L  +I  AG   S  +A + +    +K++   I +    + + +      I +
Sbjct: 4   LAKIISNAGIC-SRRDAEKLIAEGQVKVDGITILSPATNVDISNKIEVSGILI 55


>gi|213612875|ref|ZP_03370701.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. E98-2068]
          Length = 838

 Score = 36.3 bits (83), Expect = 9.4,   Method: Composition-based stats.
 Identities = 7/44 (15%), Positives = 13/44 (29%), Gaps = 4/44 (9%)

Query: 206 IICGIDLGERLKTPKLF----ALTSPLLTTASGTKMGKTLSGAI 245
           I+  +   +               + L+    G KM K+    I
Sbjct: 520 IMMTMHFIKDENGKPQVPFHTVYMTGLIRDDEGQKMSKSKGNVI 563


>gi|167377470|ref|XP_001734410.1| tyrosyl-tRNA synthetase [Entamoeba dispar SAW760]
 gi|165904082|gb|EDR29436.1| tyrosyl-tRNA synthetase, putative [Entamoeba dispar SAW760]
          Length = 215

 Score = 36.3 bits (83), Expect = 9.4,   Method: Composition-based stats.
 Identities = 18/104 (17%), Positives = 39/104 (37%), Gaps = 15/104 (14%)

Query: 150 VNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICG 209
           +++++  +        + +LS  +  Y  +Q  D  EL       +   G DQ    +  
Sbjct: 1   MSQIMGRD-------EKDALSTSQLIYPCMQCADIFEL----GADVCQLGLDQRKVNMLA 49

Query: 210 IDLGERLKTPKLFALTSPLLTTASGT---KMGKTLSG-AIWLNK 249
            +    +       L+  +L    G    KM K++   AI+++ 
Sbjct: 50  REYAPTVNRKAPIVLSHHMLMGLKGPKAGKMSKSIPDSAIFMDD 93


>gi|125719124|ref|YP_001036257.1| 30S ribosomal protein S4 [Streptococcus sanguinis SK36]
 gi|125499041|gb|ABN45707.1| 30S ribosomal protein S4, putative [Streptococcus sanguinis SK36]
 gi|325686442|gb|EGD28471.1| 30S ribosomal protein S4 [Streptococcus sanguinis SK72]
 gi|325698067|gb|EGD39948.1| 30S ribosomal protein S4 [Streptococcus sanguinis SK160]
 gi|327463801|gb|EGF10117.1| 30S ribosomal protein S4 [Streptococcus sanguinis SK1057]
 gi|327467659|gb|EGF13156.1| 30S ribosomal protein S4 [Streptococcus sanguinis SK330]
 gi|327471574|gb|EGF17017.1| 30S ribosomal protein S4 [Streptococcus sanguinis SK408]
 gi|328945138|gb|EGG39293.1| 30S ribosomal protein S4 [Streptococcus sanguinis SK1087]
 gi|332363571|gb|EGJ41352.1| 30S ribosomal protein S4 [Streptococcus sanguinis SK1059]
 gi|332364129|gb|EGJ41906.1| 30S ribosomal protein S4 [Streptococcus sanguinis SK49]
          Length = 245

 Score = 36.3 bits (83), Expect = 9.4,   Method: Composition-based stats.
 Identities = 13/104 (12%), Positives = 33/104 (31%), Gaps = 11/104 (10%)

Query: 314 EEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGM-----------GLLTLIVKAGFA 362
           E   + A      F   +  +    + +   ++  G+            L  ++ + G A
Sbjct: 88  EYGLQLAEKQKLRFTYGVGEKQFRNLFVQASKIKEGILGFNFMLLLERRLDNVVYRLGLA 147

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
           T+  +AR+ +    I ++   +     ++      S     L  
Sbjct: 148 TTRRQARQFVNHGHILVDGKRVDIPSYRVTPGQVISVREKSLKV 191


>gi|29377528|ref|NP_816682.1| 30S ribosomal protein S4 [Enterococcus faecalis V583]
 gi|227517321|ref|ZP_03947370.1| 30S ribosomal protein S4 [Enterococcus faecalis TX0104]
 gi|227554493|ref|ZP_03984540.1| 30S ribosomal protein S4 [Enterococcus faecalis HH22]
 gi|229547500|ref|ZP_04436225.1| 30S ribosomal protein S4 [Enterococcus faecalis TX1322]
 gi|229548076|ref|ZP_04436801.1| 30S ribosomal protein S4 [Enterococcus faecalis ATCC 29200]
 gi|256618170|ref|ZP_05475016.1| 30S ribosomal protein S4 [Enterococcus faecalis ATCC 4200]
 gi|256854748|ref|ZP_05560112.1| ribosomal protein S4 [Enterococcus faecalis T8]
 gi|256958352|ref|ZP_05562523.1| 30S ribosomal protein S4 [Enterococcus faecalis DS5]
 gi|256960421|ref|ZP_05564592.1| 30S ribosomal protein S4 [Enterococcus faecalis Merz96]
 gi|256962912|ref|ZP_05567083.1| 30S ribosomal protein S4 [Enterococcus faecalis HIP11704]
 gi|257078338|ref|ZP_05572699.1| 30S ribosomal protein S4 [Enterococcus faecalis JH1]
 gi|257080522|ref|ZP_05574883.1| 30S ribosomal protein S4 [Enterococcus faecalis E1Sol]
 gi|257083258|ref|ZP_05577619.1| 30S ribosomal protein S4 [Enterococcus faecalis Fly1]
 gi|257088187|ref|ZP_05582548.1| 30S ribosomal protein S4 [Enterococcus faecalis D6]
 gi|257091313|ref|ZP_05585674.1| 30S ribosomal protein S4 [Enterococcus faecalis CH188]
 gi|257417921|ref|ZP_05594915.1| 30S ribosomal protein S4 [Enterococcus faecalis T11]
 gi|257420473|ref|ZP_05597463.1| 30S ribosomal protein S4 [Enterococcus faecalis X98]
 gi|293383922|ref|ZP_06629824.1| ribosomal protein S4 [Enterococcus faecalis R712]
 gi|293388316|ref|ZP_06632830.1| ribosomal protein S4 [Enterococcus faecalis S613]
 gi|294780202|ref|ZP_06745574.1| ribosomal protein S4 [Enterococcus faecalis PC1.1]
 gi|300861437|ref|ZP_07107521.1| ribosomal protein S4 [Enterococcus faecalis TUSoD Ef11]
 gi|307270423|ref|ZP_07551724.1| ribosomal protein S4 [Enterococcus faecalis TX4248]
 gi|307273936|ref|ZP_07555148.1| ribosomal protein S4 [Enterococcus faecalis TX0855]
 gi|307276703|ref|ZP_07557820.1| ribosomal protein S4 [Enterococcus faecalis TX2134]
 gi|307278207|ref|ZP_07559289.1| ribosomal protein S4 [Enterococcus faecalis TX0860]
 gi|307286409|ref|ZP_07566515.1| ribosomal protein S4 [Enterococcus faecalis TX0109]
 gi|307292091|ref|ZP_07571958.1| ribosomal protein S4 [Enterococcus faecalis TX0411]
 gi|312901910|ref|ZP_07761173.1| ribosomal protein S4 [Enterococcus faecalis TX0470]
 gi|312905372|ref|ZP_07764487.1| ribosomal protein S4 [Enterococcus faecalis TX0635]
 gi|312906737|ref|ZP_07765737.1| ribosomal protein S4 [Enterococcus faecalis DAPTO 512]
 gi|312910725|ref|ZP_07769564.1| ribosomal protein S4 [Enterococcus faecalis DAPTO 516]
 gi|312953171|ref|ZP_07772018.1| ribosomal protein S4 [Enterococcus faecalis TX0102]
 gi|41017833|sp|Q82ZI6|RS4_ENTFA RecName: Full=30S ribosomal protein S4
 gi|29344995|gb|AAO82752.1| ribosomal protein S4 [Enterococcus faecalis V583]
 gi|227075191|gb|EEI13154.1| 30S ribosomal protein S4 [Enterococcus faecalis TX0104]
 gi|227176403|gb|EEI57375.1| 30S ribosomal protein S4 [Enterococcus faecalis HH22]
 gi|229306762|gb|EEN72758.1| 30S ribosomal protein S4 [Enterococcus faecalis ATCC 29200]
 gi|229307342|gb|EEN73329.1| 30S ribosomal protein S4 [Enterococcus faecalis TX1322]
 gi|256597697|gb|EEU16873.1| 30S ribosomal protein S4 [Enterococcus faecalis ATCC 4200]
 gi|256710308|gb|EEU25352.1| ribosomal protein S4 [Enterococcus faecalis T8]
 gi|256948848|gb|EEU65480.1| 30S ribosomal protein S4 [Enterococcus faecalis DS5]
 gi|256950917|gb|EEU67549.1| 30S ribosomal protein S4 [Enterococcus faecalis Merz96]
 gi|256953408|gb|EEU70040.1| 30S ribosomal protein S4 [Enterococcus faecalis HIP11704]
 gi|256986368|gb|EEU73670.1| 30S ribosomal protein S4 [Enterococcus faecalis JH1]
 gi|256988552|gb|EEU75854.1| 30S ribosomal protein S4 [Enterococcus faecalis E1Sol]
 gi|256991288|gb|EEU78590.1| 30S ribosomal protein S4 [Enterococcus faecalis Fly1]
 gi|256996217|gb|EEU83519.1| 30S ribosomal protein S4 [Enterococcus faecalis D6]
 gi|257000125|gb|EEU86645.1| 30S ribosomal protein S4 [Enterococcus faecalis CH188]
 gi|257159749|gb|EEU89709.1| 30S ribosomal protein S4 [Enterococcus faecalis T11]
 gi|257162297|gb|EEU92257.1| 30S ribosomal protein S4 [Enterococcus faecalis X98]
 gi|291078749|gb|EFE16113.1| ribosomal protein S4 [Enterococcus faecalis R712]
 gi|291082326|gb|EFE19289.1| ribosomal protein S4 [Enterococcus faecalis S613]
 gi|294452745|gb|EFG21175.1| ribosomal protein S4 [Enterococcus faecalis PC1.1]
 gi|295114399|emb|CBL33036.1| SSU ribosomal protein S4P [Enterococcus sp. 7L76]
 gi|300848898|gb|EFK76651.1| ribosomal protein S4 [Enterococcus faecalis TUSoD Ef11]
 gi|306496873|gb|EFM66423.1| ribosomal protein S4 [Enterococcus faecalis TX0411]
 gi|306502422|gb|EFM71695.1| ribosomal protein S4 [Enterococcus faecalis TX0109]
 gi|306505196|gb|EFM74384.1| ribosomal protein S4 [Enterococcus faecalis TX0860]
 gi|306506602|gb|EFM75755.1| ribosomal protein S4 [Enterococcus faecalis TX2134]
 gi|306509415|gb|EFM78473.1| ribosomal protein S4 [Enterococcus faecalis TX0855]
 gi|306513201|gb|EFM81832.1| ribosomal protein S4 [Enterococcus faecalis TX4248]
 gi|310627385|gb|EFQ10668.1| ribosomal protein S4 [Enterococcus faecalis DAPTO 512]
 gi|310628914|gb|EFQ12197.1| ribosomal protein S4 [Enterococcus faecalis TX0102]
 gi|310631396|gb|EFQ14679.1| ribosomal protein S4 [Enterococcus faecalis TX0635]
 gi|311288988|gb|EFQ67544.1| ribosomal protein S4 [Enterococcus faecalis DAPTO 516]
 gi|311290977|gb|EFQ69533.1| ribosomal protein S4 [Enterococcus faecalis TX0470]
 gi|315027687|gb|EFT39619.1| ribosomal protein S4 [Enterococcus faecalis TX2137]
 gi|315028229|gb|EFT40161.1| ribosomal protein S4 [Enterococcus faecalis TX4000]
 gi|315031243|gb|EFT43175.1| ribosomal protein S4 [Enterococcus faecalis TX0017]
 gi|315036538|gb|EFT48470.1| ribosomal protein S4 [Enterococcus faecalis TX0027]
 gi|315143294|gb|EFT87310.1| ribosomal protein S4 [Enterococcus faecalis TX2141]
 gi|315148889|gb|EFT92905.1| ribosomal protein S4 [Enterococcus faecalis TX4244]
 gi|315149065|gb|EFT93081.1| ribosomal protein S4 [Enterococcus faecalis TX0012]
 gi|315152920|gb|EFT96936.1| ribosomal protein S4 [Enterococcus faecalis TX0031]
 gi|315154776|gb|EFT98792.1| ribosomal protein S4 [Enterococcus faecalis TX0043]
 gi|315157493|gb|EFU01510.1| ribosomal protein S4 [Enterococcus faecalis TX0312]
 gi|315162550|gb|EFU06567.1| ribosomal protein S4 [Enterococcus faecalis TX0645]
 gi|315164504|gb|EFU08521.1| ribosomal protein S4 [Enterococcus faecalis TX1302]
 gi|315167181|gb|EFU11198.1| ribosomal protein S4 [Enterococcus faecalis TX1341]
 gi|315171025|gb|EFU15042.1| ribosomal protein S4 [Enterococcus faecalis TX1342]
 gi|315173453|gb|EFU17470.1| ribosomal protein S4 [Enterococcus faecalis TX1346]
 gi|315573361|gb|EFU85552.1| ribosomal protein S4 [Enterococcus faecalis TX0309B]
 gi|315578558|gb|EFU90749.1| ribosomal protein S4 [Enterococcus faecalis TX0630]
 gi|315581207|gb|EFU93398.1| ribosomal protein S4 [Enterococcus faecalis TX0309A]
 gi|323479004|gb|ADX78443.1| ribosomal protein S4 [Enterococcus faecalis 62]
 gi|327536193|gb|AEA95027.1| 30S ribosomal protein S4 [Enterococcus faecalis OG1RF]
 gi|329571122|gb|EGG52828.1| ribosomal protein S4 [Enterococcus faecalis TX1467]
          Length = 203

 Score = 36.3 bits (83), Expect = 9.4,   Method: Composition-based stats.
 Identities = 6/48 (12%), Positives = 19/48 (39%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
            ++ + G AT+  +AR+ +    I ++   +      +++        
Sbjct: 97  NVVYRLGLATTRRQARQLVNHGHITVDGKRVDIPSYHVEVGQVIGVRE 144


>gi|71029538|ref|XP_764412.1| tryptophanyl-tRNA synthetase [Theileria parva strain Muguga]
 gi|68351366|gb|EAN32129.1| Tryptophanyl-tRNA synthetase, putative [Theileria parva]
          Length = 306

 Score = 36.3 bits (83), Expect = 9.4,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 58/178 (32%), Gaps = 22/178 (12%)

Query: 41  GYDLTASSLHAGHLTQ-LMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEI 99
           G   T   +H G+    L      Q+T +    ++    +I G  S  +++ +      I
Sbjct: 59  GIQPTGE-IHIGNYIGCLSPCLNYQRTHNDLNVMIADNHAISGLKS--NDNLKKYTRSTI 115

Query: 100 QENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESV 159
             +I        + I   +     L LN   W+           +GS     +       
Sbjct: 116 ALSIASGINPEKTRIFIQSQFPQILELN---WI-----------LGSVVRTGKFHKIVQF 161

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK 217
           R+R     + +   F Y +L A D   +   +     + G DQ  ++     +  +L 
Sbjct: 162 RNRGINVSNENLATFLYPLLMASDIFAMNATHI----IAGPDQKIHLTLARYIARKLN 215


>gi|332365060|gb|EGJ42825.1| 30S ribosomal protein S4 [Streptococcus sanguinis SK355]
          Length = 245

 Score = 36.3 bits (83), Expect = 9.4,   Method: Composition-based stats.
 Identities = 13/104 (12%), Positives = 33/104 (31%), Gaps = 11/104 (10%)

Query: 314 EEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGM-----------GLLTLIVKAGFA 362
           E   + A      F   +  +    + +   ++  G+            L  ++ + G A
Sbjct: 88  EYGLQLAEKQKLRFTYGVGEKQFRNLFVQASKIKEGILGFNFMLLLERRLDNVVYRLGLA 147

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
           T+  +AR+ +    I ++   +     ++      S     L  
Sbjct: 148 TTRRQARQFVNHGHILVDGKRVDIPSYRVTPGQVISVREKSLKV 191


>gi|254804359|ref|YP_003082580.1| putative RNA-binding protein [Neisseria meningitidis alpha14]
 gi|254667901|emb|CBA04037.1| putative RNA-binding protein [Neisseria meningitidis alpha14]
 gi|308389927|gb|ADO32247.1| hypothetical protein NMBB_2083 [Neisseria meningitidis alpha710]
          Length = 77

 Score = 36.3 bits (83), Expect = 9.4,   Method: Composition-based stats.
 Identities = 10/58 (17%), Positives = 23/58 (39%)

Query: 340 SISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
           +I   E +  + L  L+   G A S  +A+  +    +  N    + +  +I+  +  
Sbjct: 3   AIVYLEDNEYIALCDLLKLVGLAESGGQAKAFIAEGLVLRNGETETRKTAKIRGGEVI 60


>gi|229095766|ref|ZP_04226745.1| Tryptophanyl-tRNA synthetase [Bacillus cereus Rock3-29]
 gi|228687599|gb|EEL41498.1| Tryptophanyl-tRNA synthetase [Bacillus cereus Rock3-29]
          Length = 329

 Score = 36.3 bits (83), Expect = 9.4,   Method: Composition-based stats.
 Identities = 47/304 (15%), Positives = 92/304 (30%), Gaps = 64/304 (21%)

Query: 41  GYDLTASSLHAGHLTQLMLLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQ 100
           G   + + +  G+    M  F   +  H     +    + I  P    + R+ +RS    
Sbjct: 7   GIQPSGT-ITLGNYLGAMKQFTELQNEHDCYFCIVNQHA-ITVPQDPIQLRKNIRSLAAL 64

Query: 101 ENIEKIKGIFSSFIKYGTGKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLS-FESV 159
                I    ++          A +     W        +++ +     + RM    +  
Sbjct: 65  YVACGIDPEKATLFVQSEVPAHAQL----GW--------IMQSVAYVGELERMTQYKDKA 112

Query: 160 RSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQWGNIICGIDLGERLK-- 217
             R      L      Y  L A D +     Y+  +   G DQ  ++    DL ER    
Sbjct: 113 SGRDSVPAGL----LTYPPLMAADILL----YNTEIVPVGDDQKQHMELTRDLAERFNKR 164

Query: 218 ---------------TPKLFALTSPLLTTASGTKMGKTLSGAIWLNKEMTSPYNFWQYWR 262
                            ++ +LT P        KM K+      +   +  P    +  +
Sbjct: 165 FREVFIVPEIRIPKVGARVMSLTEPT------KKMSKSDPNPKSMISMLDEPKTIEKKIK 218

Query: 263 N-IDDAD-VVSFAKR--------------LTTLPMSEIDRMAKLQGKEINEAKKIIATEI 306
           + + D++ +V F K                +   + EI+ M   +GK   + K  +A  +
Sbjct: 219 SAVTDSEGIVKFDKENKPGISNLLTIYSSFSGKTVEEIEAMY--EGKGYGDFKGDLAQVV 276

Query: 307 TTMV 310
              +
Sbjct: 277 VEAI 280


>gi|152112269|sp|A3CRA2|RS4_STRSV RecName: Full=30S ribosomal protein S4
 gi|324991900|gb|EGC23823.1| 30S ribosomal protein S4 [Streptococcus sanguinis SK405]
 gi|324996210|gb|EGC28120.1| 30S ribosomal protein S4 [Streptococcus sanguinis SK678]
 gi|327458525|gb|EGF04875.1| 30S ribosomal protein S4 [Streptococcus sanguinis SK1]
 gi|327490386|gb|EGF22172.1| 30S ribosomal protein S4 [Streptococcus sanguinis SK1058]
          Length = 203

 Score = 36.3 bits (83), Expect = 9.4,   Method: Composition-based stats.
 Identities = 13/104 (12%), Positives = 33/104 (31%), Gaps = 11/104 (10%)

Query: 314 EEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGM-----------GLLTLIVKAGFA 362
           E   + A      F   +  +    + +   ++  G+            L  ++ + G A
Sbjct: 46  EYGLQLAEKQKLRFTYGVGEKQFRNLFVQASKIKEGILGFNFMLLLERRLDNVVYRLGLA 105

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
           T+  +AR+ +    I ++   +     ++      S     L  
Sbjct: 106 TTRRQARQFVNHGHILVDGKRVDIPSYRVTPGQVISVREKSLKV 149


>gi|332359530|gb|EGJ37349.1| 30S ribosomal protein S4 [Streptococcus sanguinis SK1056]
          Length = 226

 Score = 36.3 bits (83), Expect = 9.5,   Method: Composition-based stats.
 Identities = 13/104 (12%), Positives = 33/104 (31%), Gaps = 11/104 (10%)

Query: 314 EEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGM-----------GLLTLIVKAGFA 362
           E   + A      F   +  +    + +   ++  G+            L  ++ + G A
Sbjct: 69  EYGLQLAEKQKLRFTYGVGEKQFRNLFVQASKIKEGILGFNFMLLLERRLDNVVYRLGLA 128

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
           T+  +AR+ +    I ++   +     ++      S     L  
Sbjct: 129 TTRRQARQFVNHGHILVDGKRVDIPSYRVTPGQVISVREKSLKV 172


>gi|331701254|ref|YP_004398213.1| 30S ribosomal protein S4 [Lactobacillus buchneri NRRL B-30929]
 gi|329128597|gb|AEB73150.1| ribosomal protein S4 [Lactobacillus buchneri NRRL B-30929]
          Length = 203

 Score = 36.3 bits (83), Expect = 9.5,   Method: Composition-based stats.
 Identities = 7/44 (15%), Positives = 18/44 (40%)

Query: 358 KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
           + G AT+  +AR+ +    I ++   +     +++     S   
Sbjct: 101 RLGLATTRRQARQLVNHGHITVDGKRVDIPSYEVQPGQVISVRE 144


>gi|329770399|ref|ZP_08261781.1| 30S ribosomal protein S4 [Gemella sanguinis M325]
 gi|328836522|gb|EGF86182.1| 30S ribosomal protein S4 [Gemella sanguinis M325]
          Length = 200

 Score = 36.3 bits (83), Expect = 9.5,   Method: Composition-based stats.
 Identities = 17/127 (13%), Positives = 41/127 (32%), Gaps = 16/127 (12%)

Query: 283 EIDRMAKLQGKEINEAKKIIATEITTM--------VHGREEAEKAATAAMECFDMSIHSQ 334
           E+ +     G+     +K ++     +        +HG  E         + FD +   Q
Sbjct: 25  ELAKRPYAPGQHGPNLRKKLSEYGLQLQEKQKLRYLHGMNE-----KQFRKLFDKAGKLQ 79

Query: 335 HMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQ 394
            +   +      +R   ++  +   G A +  +AR+ +    I ++   +      +K  
Sbjct: 80  GLHGANFMALLATRLDSVVYSL---GLARTNRQARQLVNHGHILVDGKKVDIASYAVKPG 136

Query: 395 DFDSTGN 401
              S   
Sbjct: 137 QVVSVRE 143


>gi|289663286|ref|ZP_06484867.1| hypothetical protein XcampvN_09437 [Xanthomonas campestris pv.
           vasculorum NCPPB702]
          Length = 80

 Score = 36.3 bits (83), Expect = 9.5,   Method: Composition-based stats.
 Identities = 10/66 (15%), Positives = 26/66 (39%)

Query: 341 ISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTG 400
           +  D     + L  L+  AG A S  + +  + S A+ ++      +  +I+        
Sbjct: 4   LEFDLDGDYIELNQLLKLAGIADSGGQGKAIVASGAVSVDGVQELRKTAKIRPGQLVQLD 63

Query: 401 NIKLSF 406
           ++++  
Sbjct: 64  DVEIRV 69


>gi|213161212|ref|ZP_03346922.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. E00-7866]
          Length = 813

 Score = 36.3 bits (83), Expect = 9.5,   Method: Composition-based stats.
 Identities = 7/44 (15%), Positives = 13/44 (29%), Gaps = 4/44 (9%)

Query: 206 IICGIDLGERLKTPKLF----ALTSPLLTTASGTKMGKTLSGAI 245
           I+  +   +               + L+    G KM K+    I
Sbjct: 520 IMMTMHFIKDENGKPQVPFHTVYMTGLIRDDEGQKMSKSKGNVI 563


>gi|159905462|ref|YP_001549124.1| tryptophanyl-tRNA synthetase [Methanococcus maripaludis C6]
 gi|159886955|gb|ABX01892.1| tryptophanyl-tRNA synthetase [Methanococcus maripaludis C6]
          Length = 358

 Score = 36.3 bits (83), Expect = 9.5,   Method: Composition-based stats.
 Identities = 44/273 (16%), Positives = 88/273 (32%), Gaps = 41/273 (15%)

Query: 6   SDFLSILSE------RGFIHQISNPRELDILCSQGV-VTAYIGYDLTASSLHAGHLTQLM 58
           S+ ++ L E      RG +    + +++    +     T   G   +   +H GH   + 
Sbjct: 26  SEIVNTLKEPHSFMKRGIVFGHRDFQKIADAMNNEKEFTVVSGMMPSGK-MHFGHKMVVD 84

Query: 59  LLFWLQKTGHKPISLMGGGTSIIGDPSFRDESRRMMRSQEIQENIEKIKGIFSSFIKYGT 118
            L + QK G      +    +        + ++++   + I   I          +    
Sbjct: 85  QLLYYQKYGADIYIPIADLEAYWARGMDFETTKKLAIEEYITNYIA---------LGLDP 135

Query: 119 GKTDALMLNNETWLCSIKYIDLLREIGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMI 178
            K +  + +      +    DL   +    +   M            E ++    F   I
Sbjct: 136 EKINVYLQS-----KNETVKDLAMRLSKRVNFTEM--KGIYG--FSGETNIG-HVFA-PI 184

Query: 179 LQAYDFVE-LAKNYDCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSP------LLTT 231
           +Q  D +    +     +   G DQ  +I    D+  R K    F   +P       +T 
Sbjct: 185 VQVADILHPQLEKKVPVVVPVGIDQDPHIRLTRDIAGRYKD---FNFIAPSSTYHRFITG 241

Query: 232 ASGTKMGKTLSG-AIWLNKEMTSPYNFWQYWRN 263
             G KM  +    AI+L+ E T   +F +   +
Sbjct: 242 LLGGKMSSSKPETAIYLSDEPTK--SFKKKVMS 272


>gi|323350794|ref|ZP_08086453.1| 30S ribosomal protein S4 [Streptococcus sanguinis VMC66]
 gi|322122968|gb|EFX94671.1| 30S ribosomal protein S4 [Streptococcus sanguinis VMC66]
 gi|325689321|gb|EGD31327.1| 30S ribosomal protein S4 [Streptococcus sanguinis SK115]
 gi|325695727|gb|EGD37626.1| 30S ribosomal protein S4 [Streptococcus sanguinis SK150]
          Length = 245

 Score = 36.3 bits (83), Expect = 9.6,   Method: Composition-based stats.
 Identities = 13/104 (12%), Positives = 33/104 (31%), Gaps = 11/104 (10%)

Query: 314 EEAEKAATAAMECFDMSIHSQHMPTISISKDEVSRGM-----------GLLTLIVKAGFA 362
           E   + A      F   +  +    + +   ++  G+            L  ++ + G A
Sbjct: 88  EYGLQLAEKQKLRFTYGVGEKQFRNLFVQASKIKEGILGFNFMLLLERRLDNVVYRLGLA 147

Query: 363 TSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
           T+  +AR+ +    I ++   +     ++      S     L  
Sbjct: 148 TTRRQARQFVNHGHILVDGKRVDIPSYRVTPGQVISVREKSLKV 191


>gi|300023627|ref|YP_003756238.1| ribosomal protein S4 [Hyphomicrobium denitrificans ATCC 51888]
 gi|299525448|gb|ADJ23917.1| ribosomal protein S4 [Hyphomicrobium denitrificans ATCC 51888]
          Length = 205

 Score = 36.3 bits (83), Expect = 9.6,   Method: Composition-based stats.
 Identities = 8/46 (17%), Positives = 21/46 (45%), Gaps = 1/46 (2%)

Query: 353 LTLIV-KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
           L  +V +A F  +   AR+ +    + +N   ++    ++++ D  
Sbjct: 96  LDALVYRAKFVPTVFAARQFVSHGHVTVNGKRVTIPSYRLRIGDVI 141


>gi|31323176|gb|AAP43521.1| ValS [Escherichia coli B]
          Length = 801

 Score = 36.3 bits (83), Expect = 9.6,   Method: Composition-based stats.
 Identities = 7/44 (15%), Positives = 13/44 (29%), Gaps = 4/44 (9%)

Query: 206 IICGIDLGERLKTPKLF----ALTSPLLTTASGTKMGKTLSGAI 245
           I+  +   +               + L+    G KM K+    I
Sbjct: 520 IMMTMHFIKDENGKPQVPFHTVYMTGLIRDDEGQKMSKSKGNVI 563


>gi|323498587|ref|ZP_08103579.1| 16S rRNA uridine-516 pseudouridylate synthase [Vibrio sinaloensis
           DSM 21326]
 gi|323316285|gb|EGA69304.1| 16S rRNA uridine-516 pseudouridylate synthase [Vibrio sinaloensis
           DSM 21326]
          Length = 344

 Score = 36.3 bits (83), Expect = 9.7,   Method: Composition-based stats.
 Identities = 9/30 (30%), Positives = 14/30 (46%), Gaps = 1/30 (3%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSI 383
             I + GF  S  EA R ++   + IN  +
Sbjct: 11  KFISETGFC-SRREADRLIEQGRVTINGRV 39


>gi|311069452|ref|YP_003974375.1| 30S ribosomal protein S4 [Bacillus atrophaeus 1942]
 gi|310869969|gb|ADP33444.1| 30S ribosomal protein S4 [Bacillus atrophaeus 1942]
          Length = 200

 Score = 36.3 bits (83), Expect = 9.7,   Method: Composition-based stats.
 Identities = 15/87 (17%), Positives = 27/87 (31%), Gaps = 13/87 (14%)

Query: 320 ATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLT-----LIVKAGFATSTNEARRHLKS 374
                  FD +          ++       M LL      L+ K G A +  +AR+ +  
Sbjct: 65  ERQFRTLFDKAA--------KLTGKHGENFMILLDARLDNLVYKLGLARTRRQARQLVNH 116

Query: 375 NAIKINNSIISNEKLQIKLQDFDSTGN 401
             I ++ S +     Q+K         
Sbjct: 117 GHILVDGSRVDIPSYQVKPGQTIGVRE 143


>gi|300988164|ref|ZP_07178584.1| valyl-tRNA synthetase [Escherichia coli MS 200-1]
 gi|300305974|gb|EFJ60494.1| valyl-tRNA synthetase [Escherichia coli MS 200-1]
          Length = 667

 Score = 36.3 bits (83), Expect = 9.7,   Method: Composition-based stats.
 Identities = 7/44 (15%), Positives = 13/44 (29%), Gaps = 4/44 (9%)

Query: 206 IICGIDLGERLKTPKLF----ALTSPLLTTASGTKMGKTLSGAI 245
           I+  +   +               + L+    G KM K+    I
Sbjct: 520 IMMTMHFIKDENGKPQVPFHTVYMTGLIRDDEGQKMSKSKGNVI 563


>gi|295090280|emb|CBK76387.1| Uncharacterized conserved protein [Clostridium cf. saccharolyticum
           K10]
          Length = 101

 Score = 36.3 bits (83), Expect = 9.7,   Method: Composition-based stats.
 Identities = 12/65 (18%), Positives = 25/65 (38%), Gaps = 19/65 (29%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
              + L   +  AG A S  +A+  +++  +K+N +                   ++L  
Sbjct: 40  EEYIKLGQALKAAGLAESGVDAKFAIQNGLVKVNGA-------------------VELQR 80

Query: 407 GKKNH 411
           GKK +
Sbjct: 81  GKKLY 85


>gi|54022069|ref|YP_116311.1| hypothetical protein nfa1050 [Nocardia farcinica IFM 10152]
 gi|54013577|dbj|BAD54947.1| hypothetical protein [Nocardia farcinica IFM 10152]
          Length = 73

 Score = 36.3 bits (83), Expect = 9.7,   Method: Composition-based stats.
 Identities = 9/57 (15%), Positives = 24/57 (42%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
           + L   +  A    S +EA+  + +  +++N+ +      Q+++ D       K+  
Sbjct: 14  IKLGQFLKLANLIDSGSEAKTVIAAGLVRVNDEVELRRGRQLQVGDVVILAGHKVRV 70


>gi|145639224|ref|ZP_01794831.1| 16S pseudouridylate 516 synthase [Haemophilus influenzae PittII]
 gi|145271786|gb|EDK11696.1| 16S pseudouridylate 516 synthase [Haemophilus influenzae PittII]
 gi|309750799|gb|ADO80783.1| 16S RNA U516 pseudouridine synthase [Haemophilus influenzae R2866]
          Length = 232

 Score = 36.3 bits (83), Expect = 9.7,   Method: Composition-based stats.
 Identities = 10/37 (27%), Positives = 21/37 (56%), Gaps = 2/37 (5%)

Query: 359 AGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
            G     ++A + ++ +A+KIN  I+ +  +QI  +D
Sbjct: 11  TGLT--RSQATKAIRQSAVKINGEIVKSGSVQISQED 45


>gi|322712486|gb|EFZ04059.1| 30S ribosomal subunit S4 [Metarhizium anisopliae ARSEF 23]
          Length = 489

 Score = 36.3 bits (83), Expect = 9.8,   Method: Composition-based stats.
 Identities = 10/35 (28%), Positives = 19/35 (54%)

Query: 361 FATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
           FA+S  +AR+ +   A+K+N   + +   Q+   D
Sbjct: 129 FASSVRQARQFVIHGAVKVNGKKMIHPSYQLNPGD 163


>gi|315288383|gb|EFU47781.1| valyl-tRNA synthetase [Escherichia coli MS 110-3]
          Length = 925

 Score = 36.3 bits (83), Expect = 9.8,   Method: Composition-based stats.
 Identities = 7/44 (15%), Positives = 13/44 (29%), Gaps = 4/44 (9%)

Query: 206 IICGIDLGERLKTPKLF----ALTSPLLTTASGTKMGKTLSGAI 245
           I+  +   +               + L+    G KM K+    I
Sbjct: 520 IMMTMHFIKDENGKPQVPFHTVYMTGLIRDDEGQKMSKSKGNVI 563


>gi|270006885|gb|EFA03333.1| hypothetical protein TcasGA2_TC013308 [Tribolium castaneum]
          Length = 280

 Score = 36.3 bits (83), Expect = 9.8,   Method: Composition-based stats.
 Identities = 25/153 (16%), Positives = 46/153 (30%), Gaps = 31/153 (20%)

Query: 144 IGSFFSVNRMLSFESVRSRLKREQSLSFLEFNYMILQAYDFVELAKNYDCRLQMGGSDQW 203
           +G   ++ R+    + + +    + +    F Y +LQA D +     +   + +G  DQ 
Sbjct: 33  LGCICTMPRLAHLPAYKEKSANLKDIPLGLFVYPVLQAADILAYKATH---VPVG-EDQA 88

Query: 204 GNIICGIDLGERLKTPKLFALTSPLL----TTAS----------GTKMGKTLSGAIWLNK 249
            +I    DL         F  T P        +             KM K+       + 
Sbjct: 89  QHIQLTQDLARMFNNR--FGETFPTPHCIFPGSDFARLRSLRDPAKKMSKS-------DP 139

Query: 250 EMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMS 282
           +  S         +  D  V    K +T     
Sbjct: 140 DPKSRIC----LIDPPDEIVKKIKKSVTDFTSE 168


>gi|227494617|ref|ZP_03924933.1| hemolysin A [Actinomyces coleocanis DSM 15436]
 gi|226831799|gb|EEH64182.1| hemolysin A [Actinomyces coleocanis DSM 15436]
          Length = 306

 Score = 36.3 bits (83), Expect = 9.8,   Method: Composition-based stats.
 Identities = 6/42 (14%), Positives = 19/42 (45%)

Query: 356 IVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
           +V+   A S  +A+  +++  +K++  ++     Q+      
Sbjct: 11  LVRRKLAPSRTKAQEMIQAGYVKLDGEVVYKPARQMDPAQAI 52


>gi|222151637|ref|YP_002560793.1| 30S ribosomal protein S4 [Macrococcus caseolyticus JCSC5402]
 gi|254764595|sp|B9E7C9|RS4_MACCJ RecName: Full=30S ribosomal protein S4
 gi|222120762|dbj|BAH18097.1| 30S ribosomal protein S4 [Macrococcus caseolyticus JCSC5402]
          Length = 200

 Score = 36.3 bits (83), Expect = 9.8,   Method: Composition-based stats.
 Identities = 12/82 (14%), Positives = 28/82 (34%), Gaps = 3/82 (3%)

Query: 320 ATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKI 379
                  FD +   + +   +      SR   ++    + G A +  +AR+ +    I +
Sbjct: 65  ERQFRTIFDRAGKMKGIHGANFMALLASRLDAVVY---QLGLARTRRQARQLVNHGHIMV 121

Query: 380 NNSIISNEKLQIKLQDFDSTGN 401
           + + +     Q+K     S   
Sbjct: 122 DGARVDIPSYQLKPGQVISVRE 143


>gi|170696347|ref|ZP_02887477.1| RNA-binding S4 domain protein [Burkholderia graminis C4D1M]
 gi|170138753|gb|EDT06951.1| RNA-binding S4 domain protein [Burkholderia graminis C4D1M]
          Length = 72

 Score = 36.3 bits (83), Expect = 9.8,   Method: Composition-based stats.
 Identities = 9/55 (16%), Positives = 25/55 (45%)

Query: 352 LLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGNIKLSF 406
           L  L+   G A S  +A+  +   A+ ++  + + +  +I+       G+ +++ 
Sbjct: 15  LHNLLKITGLADSGGQAKLMVADGAVTVDGRVETRKTCKIRAGQVVLLGDTRIAV 69


>gi|169350323|ref|ZP_02867261.1| hypothetical protein CLOSPI_01084 [Clostridium spiroforme DSM 1552]
 gi|169293106|gb|EDS75239.1| hypothetical protein CLOSPI_01084 [Clostridium spiroforme DSM 1552]
          Length = 201

 Score = 36.3 bits (83), Expect = 9.8,   Method: Composition-based stats.
 Identities = 24/157 (15%), Positives = 47/157 (29%), Gaps = 25/157 (15%)

Query: 270 VSFAKRLTTLPMS---EIDRMAKLQGKEINEAKK------IIATEI-TTMVHGREEAEKA 319
              ++RL    +    E++R     G+   + KK       +A +     ++G  E    
Sbjct: 9   WKISRRLGFSTLENGKELNRRPYAPGQHGQKRKKPTEYGLQLAEKQKVRHMYGVNE---- 64

Query: 320 ATAAMECFDMSIHSQHMPTISISKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKI 379
                  F  +     +   +       R   ++    + GFA +   AR+ +      +
Sbjct: 65  -KQFHNTFKRAGKMSGIHGYNFFCLLEQRLDNVVY---RLGFAPTRRAARQLVNHGHFLV 120

Query: 380 NNSIISNEKLQIKLQDFDSTGNIKLSFGK-KNHIICH 415
           N          +K+ D            K KN  I  
Sbjct: 121 NGVKTDIPSYTVKVGDVVEVKE------KSKNLAIIK 151


>gi|146299144|ref|YP_001193735.1| RNA-binding S4 domain-containing protein [Flavobacterium johnsoniae
           UW101]
 gi|146153562|gb|ABQ04416.1| ribosomal large subunit pseudouridine synthase B [Flavobacterium
           johnsoniae UW101]
          Length = 302

 Score = 36.3 bits (83), Expect = 9.8,   Method: Composition-based stats.
 Identities = 16/74 (21%), Positives = 35/74 (47%), Gaps = 1/74 (1%)

Query: 342 SKDEVSRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
            + + S  + L   I  +G   S  +A  +++S  +K+N   ++     +KL D  +   
Sbjct: 62  KRQKASDEIRLNKYISNSGVC-SRRDADLYIQSGNVKVNGVPVTEMGYLVKLNDVVNFDG 120

Query: 402 IKLSFGKKNHIICH 415
           + L+  KK +I+ +
Sbjct: 121 VTLTPEKKEYILLN 134


>gi|45198580|ref|NP_985609.1| AFR062Cp [Ashbya gossypii ATCC 10895]
 gi|44984531|gb|AAS53433.1| AFR062Cp [Ashbya gossypii ATCC 10895]
          Length = 473

 Score = 36.3 bits (83), Expect = 9.8,   Method: Composition-based stats.
 Identities = 19/105 (18%), Positives = 39/105 (37%), Gaps = 8/105 (7%)

Query: 299 KKIIATEITTMVHGREEAEKAAT-------AAMECFDMSIHSQHM-PTISISKDEVSRGM 350
           +K  + + T   HG    E            ++   D S+    + PT  + +       
Sbjct: 44  QKWSSKQETRAYHGEHLTESRWQSTFSPRLTSVAQLDASLKGGDVAPTPILMQTYAVLEK 103

Query: 351 GLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQD 395
            L   + +A FA+S  +AR+ +    + +N   + +    +K  D
Sbjct: 104 RLEFALFRAMFASSVRQARQFILHGNVYVNGVTMKHPGYPLKAGD 148


>gi|329851321|ref|ZP_08266078.1| ribosomal protein S4 [Asticcacaulis biprosthecum C19]
 gi|328840167|gb|EGF89739.1| ribosomal protein S4 [Asticcacaulis biprosthecum C19]
          Length = 205

 Score = 36.3 bits (83), Expect = 9.8,   Method: Composition-based stats.
 Identities = 9/50 (18%), Positives = 20/50 (40%), Gaps = 1/50 (2%)

Query: 353 LTLIV-KAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
           L  +V +A F  +   AR+ +    + +N   ++    ++K  D      
Sbjct: 96  LDALVYRAKFVPTVWAARQFVNHGHVTVNGQRVNIPSYRVKPDDVVEVRE 145


>gi|297183660|gb|ADI19785.1| lysyl-tRNA synthetase (class I) [uncultured alpha proteobacterium
           EB000_37G09]
          Length = 541

 Score = 36.3 bits (83), Expect = 9.8,   Method: Composition-based stats.
 Identities = 18/114 (15%), Positives = 36/114 (31%), Gaps = 12/114 (10%)

Query: 192 DCRLQMGGSDQWGNIICGIDLGERLKTPKLFALTSPLLTTASGTKMGKTLSGAI----WL 247
               +M G D   ++     +   L+       +  L    +G K+ K+    +    WL
Sbjct: 255 GVDYEMSGKDLIDSVTLSSKIVRVLRGTPPAGFSYELFLDQNGEKISKSKGNGLSVEDWL 314

Query: 248 NKEMTSPYNFWQYWRNIDDADVVSFAKRLTTLPMSEIDRMAKLQGK--EINEAK 299
                SP +   +  +          +         +D      GK  E++EA+
Sbjct: 315 --RYGSPESLALFMYSQP----KRAKRLYFDSIPKTVDEYFAHAGKLAEMDEAQ 362


>gi|260583938|ref|ZP_05851686.1| 30S ribosomal protein S4 [Granulicatella elegans ATCC 700633]
 gi|260158564|gb|EEW93632.1| 30S ribosomal protein S4 [Granulicatella elegans ATCC 700633]
          Length = 203

 Score = 36.3 bits (83), Expect = 9.8,   Method: Composition-based stats.
 Identities = 5/32 (15%), Positives = 16/32 (50%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIIS 385
            ++ + G A++  +AR+ +    + +N   + 
Sbjct: 97  NVVYRLGLASTRRQARQLVNHGHVTVNGKRVD 128


>gi|168211877|ref|ZP_02637502.1| ribosomal protein S4 [Clostridium perfringens B str. ATCC 3626]
 gi|170710184|gb|EDT22366.1| ribosomal protein S4 [Clostridium perfringens B str. ATCC 3626]
          Length = 206

 Score = 36.3 bits (83), Expect = 9.8,   Method: Composition-based stats.
 Identities = 12/58 (20%), Positives = 22/58 (37%), Gaps = 8/58 (13%)

Query: 348 RGMGLLTLI--------VKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFD 397
            G  LL L+         + G+  S  EAR+ +      +N   +     ++ + DF 
Sbjct: 88  AGENLLKLLEMRLDNVVYRLGYGASRTEARQLVNHGHFLVNGKKVDIASFKVSVNDFI 145


>gi|241204404|ref|YP_002975500.1| valyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM1325]
 gi|240858294|gb|ACS55961.1| valyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM1325]
          Length = 947

 Score = 36.3 bits (83), Expect = 9.8,   Method: Composition-based stats.
 Identities = 8/44 (18%), Positives = 16/44 (36%), Gaps = 4/44 (9%)

Query: 206 IICGIDLGERLKTPKL----FALTSPLLTTASGTKMGKTLSGAI 245
           ++ G+ L +      +          L+   +G KM K+    I
Sbjct: 557 MMMGLHLMKDEDGEPVEPFETVYVHALVRDKNGQKMSKSKGNVI 600


>gi|283834893|ref|ZP_06354634.1| valine--tRNA ligase [Citrobacter youngae ATCC 29220]
 gi|291069152|gb|EFE07261.1| valine--tRNA ligase [Citrobacter youngae ATCC 29220]
          Length = 951

 Score = 36.3 bits (83), Expect = 9.9,   Method: Composition-based stats.
 Identities = 7/44 (15%), Positives = 13/44 (29%), Gaps = 4/44 (9%)

Query: 206 IICGIDLGERLKTPKLF----ALTSPLLTTASGTKMGKTLSGAI 245
           I+  +   +               + L+    G KM K+    I
Sbjct: 520 IMMTMHFIKDENGKPQVPFHTVYMTGLIRDDEGQKMSKSKGNVI 563


>gi|289824523|ref|ZP_06544082.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. E98-3139]
          Length = 922

 Score = 36.3 bits (83), Expect = 9.9,   Method: Composition-based stats.
 Identities = 7/44 (15%), Positives = 13/44 (29%), Gaps = 4/44 (9%)

Query: 206 IICGIDLGERLKTPKLF----ALTSPLLTTASGTKMGKTLSGAI 245
           I+  +   +               + L+    G KM K+    I
Sbjct: 520 IMMTMHFIKDENGKPQVPFHTVYMTGLIRDDEGQKMSKSKGNVI 563


>gi|204926949|ref|ZP_03218151.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Javiana str. GA_MM04042433]
 gi|204323614|gb|EDZ08809.1| valyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Javiana str. GA_MM04042433]
          Length = 951

 Score = 36.3 bits (83), Expect = 9.9,   Method: Composition-based stats.
 Identities = 7/44 (15%), Positives = 13/44 (29%), Gaps = 4/44 (9%)

Query: 206 IICGIDLGERLKTPKLF----ALTSPLLTTASGTKMGKTLSGAI 245
           I+  +   +               + L+    G KM K+    I
Sbjct: 520 IMMTMHFIKDENGKPQVPFHTVYMTGLIRDDEGQKMSKSKGNVI 563


>gi|121534659|ref|ZP_01666480.1| ribosomal protein S4 [Thermosinus carboxydivorans Nor1]
 gi|121306679|gb|EAX47600.1| ribosomal protein S4 [Thermosinus carboxydivorans Nor1]
          Length = 208

 Score = 36.3 bits (83), Expect = 9.9,   Method: Composition-based stats.
 Identities = 8/48 (16%), Positives = 20/48 (41%)

Query: 354 TLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
            ++ + G A +  +AR+ ++     +N   +     Q+K+ D      
Sbjct: 102 NVVYRLGLAANRTQARQLVRHGHFTVNGRRVDIPSFQVKVGDVIQVRE 149


>gi|118411052|ref|YP_874447.1| 30S ribosomal protein S4 [Phaeodactylum tricornutum]
 gi|125987752|sp|A0T0H2|RR4_PHATC RecName: Full=30S ribosomal protein S4, chloroplastic
 gi|116739799|gb|ABK20670.1| 30S ribosomal protein S4 [Phaeodactylum tricornutum]
          Length = 203

 Score = 36.3 bits (83), Expect = 9.9,   Method: Composition-based stats.
 Identities = 18/52 (34%), Positives = 24/52 (46%)

Query: 350 MGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIISNEKLQIKLQDFDSTGN 401
           M L TL    GFA S  +AR+ +    I IN  ++S    Q +L D  S   
Sbjct: 92  MRLDTLCFTLGFAKSLAQARQLVNHGHITINKKVVSIPSFQCRLNDIISIKE 143


>gi|91215957|ref|ZP_01252926.1| pseudouridine synthase, Rsu [Psychroflexus torquis ATCC 700755]
 gi|91185934|gb|EAS72308.1| pseudouridine synthase, Rsu [Psychroflexus torquis ATCC 700755]
          Length = 235

 Score = 36.3 bits (83), Expect = 9.9,   Method: Composition-based stats.
 Identities = 9/39 (23%), Positives = 17/39 (43%), Gaps = 1/39 (2%)

Query: 347 SRGMGLLTLIVKAGFATSTNEARRHLKSNAIKINNSIIS 385
              + +   + +AGF  S  EA + ++   + IN   I 
Sbjct: 3   KESIRINKYLSQAGFC-SRREADKLMEQGRVTINGEYIE 40


  Database: nr
    Posted date:  May 22, 2011 12:22 AM
  Number of letters in database: 999,999,966
  Number of sequences in database:  2,987,313
  
  Database: /data/usr2/db/fasta/nr.01
    Posted date:  May 22, 2011 12:30 AM
  Number of letters in database: 999,999,796
  Number of sequences in database:  2,903,041
  
  Database: /data/usr2/db/fasta/nr.02
    Posted date:  May 22, 2011 12:36 AM
  Number of letters in database: 999,999,281
  Number of sequences in database:  2,904,016
  
  Database: /data/usr2/db/fasta/nr.03
    Posted date:  May 22, 2011 12:41 AM
  Number of letters in database: 999,999,960
  Number of sequences in database:  2,935,328
  
  Database: /data/usr2/db/fasta/nr.04
    Posted date:  May 22, 2011 12:46 AM
  Number of letters in database: 842,794,627
  Number of sequences in database:  2,394,679
  
Lambda     K      H
   0.315    0.159    0.480 

Lambda     K      H
   0.267   0.0487    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,501,122,509
Number of Sequences: 14124377
Number of extensions: 385558310
Number of successful extensions: 1129477
Number of sequences better than 10.0: 7150
Number of HSP's better than 10.0 without gapping: 6993
Number of HSP's successfully gapped in prelim test: 2915
Number of HSP's that attempted gapping in prelim test: 1098552
Number of HSP's gapped (non-prelim): 10705
length of query: 418
length of database: 4,842,793,630
effective HSP length: 142
effective length of query: 276
effective length of database: 2,837,132,096
effective search space: 783048458496
effective search space used: 783048458496
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.3 bits)
S2: 83 (36.3 bits)